Sample Name Barcode (Molecular Identifier) Date Sampled fastq file name ACAGCA SH128 N/A RAD44 TCCATG SH129 N/A RAD44 AGCATG SH131 9/24/12 RAD44 TCACGT SH134 N/A RAD44 CACTCA SH159 9/21/12 RAD44 CTCACA SH218 5/15/12 RAD44 CAAGTG SH255 4/21/12 RAD44 CTCAGT SH256 4/26/12 RAD44 CATCTG SH257 4/30/12 RAD44 ACCAAG SH259 4/26/12 RAD44 CTAGAG SH260 4/20/12 RAD44 CAACTC SH269 4/1/12 RAD44 GTTCTG SH270 N/A RAD44 CACTGT SH306 6/3/12 RAD44 AGGTTG SH318 6/7/12 RAD44 CTAGTC SH321 6/4/12 RAD44 CAGTCT SH325 5/2/12 RAD44 ACTCGT SH332 5/25/12 RAD44 GTACTC SH339 9/29/12 RAD44 GAGTCA SH341 9/30/12 RAD44 TCGATC SH345 N/A RAD44 GAGACT SH346 9/25/12 RAD44 GATCTC SH348 9/28/12 RAD44 GACTGA SH349 9/28/12 RAD44 GAACTG SH354 9/27/12 RAD44 ACGTAG SH357 9/27/12 RAD44 AGTCCT SH359 9/25/12 RAD44 AGCTTC SH377 9/16/12 RAD44 AGACGT SH378 9/15/12 RAD44 CTGTCA SH389 5/9/12 RAD44 CTTCTC SH391 5/8/12 RAD44 CTGTGT SH393 5/12/12 RAD44 GACAGT SH420 10/14/12 RAD44 GAAGAG SH422 10/20/12 RAD44 GATCAG SH425 10/7/12 RAD44 TGGATG SH429 10/28/12 RAD44 TGCAAG SH430 10/26/12 RAD44 GTGAGT SH432 10/29/12 RAD44 TGAGGT SH435 N/A RAD44 CTTCAG SH436 10/1/12 RAD44 TGTCCA SH440 N/A RAD44 TCTCGA SH523 6/25/12 RAD44 AGACCA SH544 5/26/12 RAD44 ACCTAC SH546 5/28/12 RAD44 "* samples with N/A were removed during the AftrRAD run because they showed relatively high levels of missing data, and were not included in downstream analyses."