##Raw data associated to Large-scale fungal strain sequencing unravels the molecular diversity in mating loci maintained by long-term balancing selection publication in Plos Genetics 2022. ##additional information is described in the dedicated GitHub page https://perisd.github.io/TriMAT/ ##Information about uploaded data: #iWGS_SPAdes_Assemblies.tar.gz: compressed genome assemblies for specimen sequenced by Illumina. Additional information about these assemblies can be found in Supplementary Table 1 of the manuscript. #CrossingPictures.rar: compressed picture files related with experimental crosses #IndividualGeneAlignments_trimmed.zip: compressed file with trimmed alignments for the coding sequences (_CDS_) and amino acid sequences (_aa_) #MATA.zip: assembled MATA regions (.fas) and annotations (.gff) for each specimen. #MATB.zip: assembled MATB regions (.fas) and annotations (.gff) for each specimen. #SourceData.rar: compressed files for raw data to generate figures and tables in the manuscript. IQTree_logFiles.tar.gz: IQTree log files with information to replicate the phylogenetic reconstruction represented in iTOL. AllvsAll_distances.meg: Converted Average Nucleotide Identity (ANI) used for reconstructing a Neighbour-Joining tree BUSCO_MAT_info.csv: BUSCO annotation statistics and location on TA10106M1 genome dxy.csv: Absolute divergence statitstic for BUSCO and MAT genes Fst.csv: Relative divergence statitstic for BUSCO and MAT genes MKT.csv: Multilocus Hudson–Kreitman–Aguadé (HKA) test performed with HKAdirect 0.7b paml.csv: Average number of synonymous substitutions per synonymous sites (dS) and non-synonymous substitutions per non-synonymous sites (dN) for BUSCO and MAT genes pi.csv: Nucleotide diversity values for BUSCO and MAT genes tajimaD.csv: Tajima’s D values for BUSCO and MAT genes