Joint posterior probabilities for genotypes and allele frequencies given the genotype likelihoods estimated by Bcftools (N1_variants.flt_s090p001.bcf), along with Hardy-Weinberg priors, computed by using a Bayesian model and Markov Chain Monte Carlo (MCMC) as in Nosil et al. 2012 (DOI: 10.1098/rspb.2012.0813), Gompert et al. 2012 (DOI: 10.1111/j.1558-5646.2012.01587.x), and Gompert et al. 2014 (DOI: 10.1111/ele.12238). This file has 5 columns: SNP number, individual number, and three columns for joint posterior probabilities for genotypes and allele frequencies REF/REF, REF/ALT, ALT/ALT.