##fileformat=VCFv4.2 ##fileDate=20210304 ##source=freeBayes v1.3.1-dirty ##reference=reference.fasta ##contig= ##phasing=none ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##FORMAT= ##FORMAT= ##FORMAT= ##FORMAT= ##FORMAT= ##FORMAT= ##FORMAT= ##FORMAT= ##FORMAT= ##FORMAT= #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT LotcorF077_P LotcorF178_P LotcorF279_P LotcorF380_P LotcorV045_P LotcorV147_P dDocent_Contig_2 8 . T C 1349.15 . AB=0.12955;ABP=1116.33;AC=1;AF=0.0833333;AN=12;AO=125;CIGAR=1X;DP=5055;DPB=5055;DPRA=1.0599;EPP=274.444;EPPR=10708.4;GTI=0;LEN=1;MEANALT=1;MQM=59.88;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999594;PAO=0;PQA=0;PQR=0;PRO=0;QA=4777;QR=189422;RO=4930;RPL=0;RPP=274.444;RPPR=10708.4;RPR=125;RUN=1;SAF=125;SAP=274.444;SAR=0;SRF=4930;SRP=10708.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:749:749,0:749:28719:0:0:0,-225.471,-2583 0/0:866:863,3:863:33185:3:115:0,-249.967,-2973.85 0/0:664:664,0:664:25600:0:0:0,-199.884,-2302.46 0/0:801:800,1:800:30635:1:35:0,-237.626,-2751.79 0/0:1041:1041,0:1041:40049:0:0:0,-313.372,-3601.82 0/1:934:813,121:813:31234:121:4627:-135.233,0,-2527.98 dDocent_Contig_3 1 . N G 77.0277 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.21888;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_4 13 . G T 16098.4 . AB=0.627365;ABP=99.8099;AC=7;AF=0.583333;AN=12;AO=506;CIGAR=7M1X4M;DP=780;DPB=783.667;DPRA=0;EPP=1101.78;EPPR=459.02;GTI=0;LEN=1;MEANALT=3.33333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=20338;QR=8177;RO=210;RPL=0;RPP=1101.78;RPPR=459.02;RPR=506;RUN=1;SAF=506;SAP=1101.78;SAR=0;SRF=210;SRP=459.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:106:34,0,4,67:34:1320:0,4,67:0,150,2689:-211.393,-221.628,-330.085,-209.346,-317.803,-316.599,0,-108.519,-96.2363,-88.3496 0|1:158:27,12,0,117:27:1047:12,0,117:421,0,4701:-379.302,-353.179,-435.581,-387.43,-439.194,-473.446,0,-51.8078,-86.0562,-50.8357 1|1:93:7,6,5,75:7:273:6,5,75:231,199,3033:-248.1,-231.241,-251.874,-233.821,-237.295,-254.756,-0.13691,-3.61297,-6.18841,0 0|1:196:23,23,4,144:23:899:23,4,144:825,144,5776:-468.973,-408.626,-475.612,-464.152,-470.791,-536.859,0,-6.66018,-62.1796,-30.5757 0|1:113:55,1,0,56:55:2134:1,0,56:39,0,2236:-167.592,-180.943,-355.965,-184.149,-356.266,-359.472,0,-172.116,-175.322,-158.464 0|1:114:64,2,1,47:64:2504:2,1,47:74,39,1903:-137.675,-150.889,-356.161,-153.735,-353.558,-359.31,0,-199.843,-202.69,-191.748 dDocent_Contig_5 21 . G C 960.302 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=28;CIGAR=1M3I1X1M1X;DP=28;DPB=49;DPRA=0;EPP=63.8115;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1056;QR=0;RO=0;RPL=0;RPP=63.8115;RPPR=0;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:15:0,15:0:0:15:564:-51.1019,-4.51545,0 1|1:13:0,13:0:0:13:492:-44.6273,-3.91339,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_6 107 . N A 103.238 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=3;CIGAR=2X1I5M;DP=13;DPB=13.4286;DPRA=1.5;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=102;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:2:0,0:0:0:0:0:0,0,0 1|1:3:0,0:0:0:0:0:0,0,0 1|1:2:0,0:0:0:0:0:0,0,0 1|1:2:0,0:0:0:0:0:0,0,0 1|1:3:0,3:0:0:3:102:-9.5169,-0.90309,0 1|1:1:0,0:0:0:0:0:0,0,0 dDocent_Contig_7 98 . N G 343.861 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=15;CIGAR=1X;DP=15;DPB=15;DPRA=0;EPP=35.5824;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=362;QR=0;RO=0;RPL=15;RPP=35.5824;RPPR=0;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:11:-1.09999,-0.30103,0 1/1:3:0,3:0:0:3:62:-5.78535,-0.90309,0 1/1:4:0,4:0:0:4:111:-10.264,-1.20412,0 1/1:3:0,3:0:0:3:70:-6.53199,-0.90309,0 1/1:4:0,4:0:0:4:108:-9.98714,-1.20412,0 ./.:.:.:.:.:.:.:. dDocent_Contig_8 143 . G T 6874.19 . AB=0.234342;ABP=874.082;AC=5;AF=0.416667;AN=12;AO=347;CIGAR=6M1X;DP=1617;DPB=1603.71;DPRA=0;EPP=756.511;EPPR=2534.95;GTI=0;LEN=1;MEANALT=3.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=12602;QR=40425;RO=1166;RPL=0;RPP=756.511;RPPR=2534.95;RPR=347;RUN=1;SAF=0;SAP=756.511;SAR=347;SRF=0;SRP=2534.95;SRR=1166;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:263:218,0,45:218:7570:0,45:0,1625:-67.3621,-132.987,-748.386,0,-615.758,-602.211 0|1:326:277,0,47:277:9627:0,47:0,1684:-53.9922,-137.377,-920.064,0,-782.731,-768.583 0|0:196:180,0,14:180:6222:0,14:0,515:0,-54.1854,-559.767,-11.938,-517.656,-513.441 0|1:305:258,11,35:258:8973:11,35:382,1240:-23.3449,-69.9564,-796.222,0,-698.527,-719.047 0|1:265:133,61,66:133:4564:61,66:2111,2409:-156.8,-25.283,-377.489,0,-199.021,-350.713 0|1:262:100,20,140:100:3469:20,140:685,5129:-389.121,-363.623,-639.577,0,-226.382,-239.841 dDocent_Contig_9 14 . A T 68.3111 . AB=0.135135;ABP=45.7942;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=196;DPB=196;DPRA=1.16352;EPP=13.8677;EPPR=417.762;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.78534;PAO=0;PQA=0;PQR=0;PRO=0;QA=199;QR=7593;RO=191;RPL=0;RPP=13.8677;RPPR=417.762;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=191;SRP=417.762;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:51:51,0:51:2045:0:0:0,-15.3525,-184.238 0/0:35:35,0:35:1393:0:0:0,-10.536,-125.625 0/0:12:12,0:12:448:0:0:0,-3.61236,-40.6473 0/0:37:37,0:37:1465:0:0:0,-11.1381,-132.101 0/0:24:24,0:24:966:0:0:0,-7.22472,-87.2388 0/1:37:32,5:32:1276:5:199:-7.14987,0,-103.966 dDocent_Contig_11 36 . T C 2201.32 . AB=0.0386598;ABP=1437.57;AC=0;AF=0;AN=12;AO=30;CIGAR=2M1X2M;DP=1140;DPB=1134.6;DPRA=0;EPP=68.1545;EPPR=2039.85;GTI=0;LEN=1;MEANALT=3.25;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.998934;PAO=0;PQA=0;PQR=0;PRO=0;QA=1201;QR=36869;RO=938;RPL=0;RPP=68.1545;RPPR=2039.85;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=938;SRP=2039.85;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:160:110,0,5,44:110:4321:0,5,44:0,197,1755:-111.441,-144.554,-499.934,-128.348,-483.727,-482.222,0,-355.408,-339.202,-342.163 0|0:200:169,0,10,21:169:6667:0,10,21:0,403,819:-16.4264,-67.3004,-615.828,-34.0795,-582.611,-579.601,0,-548.519,-515.302,-542.198 0|0:209:180,0,7,20:180:7084:0,7,20:0,280,810:-12.6108,-66.7962,-649.491,-43.7337,-626.427,-624.32,0,-582.7,-559.636,-576.679 0|0:207:164,1,8,33:164:6408:1,8,33:41,321,1312:-58.6352,-104.62,-631.096,-81.5563,-604.949,-605.925,0,-523.388,-500.325,-516.839 0|0:166:148,16,0,1:148:5829:16,0,1:616,0,41:-5.99041,0,-474.675,-50.5428,-479.491,-530.055,-47.1575,-476.107,-526.671,-526.37 0|0:198:167,10,0,21:167:6560:10,0,21:380,0,841:-19.0253,-38.1523,-574.654,-69.2973,-577.665,-608.815,0,-508.38,-539.531,-533.21 dDocent_Contig_12 98 . N G 352.46 . AB=0;ABP=0;AC=10;AF=0.833333;AN=12;AO=12;CIGAR=1X;DP=13;DPB=13;DPRA=2.4;EPP=29.068;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=59.8333;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=366;QR=0;RO=0;RPL=12;RPP=29.068;RPPR=0;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:10:-0.999994,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:4:0,4:0:0:4:138:-12.7604,-1.20412,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:5:0,5:0:0:5:148:-13.6123,-1.50515,0 0/0:1:0,0:0:0:0:0:0,0,0 dDocent_Contig_13 15 . T G 4703.64 . AB=0.283142;ABP=252.587;AC=6;AF=0.5;AN=12;AO=173;CIGAR=4M1I3M1X;DP=693;DPB=720.75;DPRA=0;EPP=378.675;EPPR=1021.43;GTI=0;LEN=1;MEANALT=2.6;MQM=60;MQMR=59.9701;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.997868;PAO=0;PQA=0;PQR=0;PRO=0;QA=6823;QR=18362;RO=469;RPL=0;RPP=378.675;RPPR=1021.43;RPR=173;RUN=1;SAF=173;SAP=378.675;SAR=0;SRF=469;SRP=1021.43;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:104:52,5,46:52:2049:5,46:198,1831:-135.11,-134.467,-301.533,0,-152.273,-154.723 0|1:191:144,5,41:144:5642:5,41:193,1594:-87.6388,-115.138,-577.584,0,-448.115,-451.622 0|1:76:43,6,27:43:1685:6,27:237,1051:-73.422,-66.8626,-203.618,0,-119.054,-130.429 0|1:138:98,1,38:98:3817:1,38:40,1515:-95.2789,-121.485,-434.801,0,-310.337,-302.193 0|1:102:67,14,21:67:2613:14,21:548,832:-48.3138,-23.4256,-233.981,0,-169.714,-208.452 0|1:82:65,17,0:65:2556:17,0:655,0:-34.5978,0,-205.525,-54.1648,-210.642,-264.42 dDocent_Contig_14 37 . T C 79401.8 . AB=0.516135;ABP=14.5727;AC=6;AF=0.5;AN=12;AO=2639;CIGAR=1X;DP=5113;DPB=5113;DPRA=0;EPP=5733.53;EPPR=5375.23;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998484;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=105468;QR=98621;RO=2474;RPL=0;RPP=5733.53;RPPR=5375.23;RPR=2639;RUN=1;SAF=2639;SAP=5733.53;SAR=0;SRF=2474;SRP=5375.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:758:445,313:445:17594:313:12432:-889.798,0,-1353.88 0/1:870:427,443:427:17033:443:17702:-1329.82,0,-1269.69 0/1:598:259,339:259:10363:339:13577:-1040.86,0,-751.959 0/1:773:469,304:469:18725:304:12099:-855.347,0,-1450.99 0/1:1068:349,719:349:13948:719:28762:-2264.41,0,-932.724 0/1:1046:525,521:525:20958:521:20896:-1563.95,0,-1569.54 dDocent_Contig_15 107 . N A 141.889 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=138;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 1/1:1:0,1:0:0:1:26:-2.59983,-0.30103,0 1/1:2:0,2:0:0:2:48:-4.55869,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 dDocent_Contig_16 9 . T A 966.369 . AB=0.231156;ABP=127.941;AC=3;AF=0.25;AN=12;AO=50;CIGAR=1X;DP=410;DPB=410;DPRA=0.864935;EPP=111.584;EPPR=784.74;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.92;PAIREDR=0.913889;PAO=0;PQA=0;PQR=0;PRO=0;QA=1899;QR=13833;RO=360;RPL=0;RPP=111.584;RPPR=784.74;RPR=50;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=360;SRP=784.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:53:40,13:40:1533:13:504:-29.7543,0,-122.285 0/1:86:63,23:63:2427:23:871:-52.8182,0,-192.746 0/0:49:46,3:46:1754:3:116:0,-3.93276,-147.297 0/1:60:50,10:50:1918:10:371:-15.6738,0,-154.8 0/0:77:77,0:77:2975:0:0:0,-23.1793,-267.912 0/0:85:84,1:84:3226:1:37:0,-21.8897,-286.788 dDocent_Contig_17 79 . C A 208.856 . AB=0.110204;ABP=649.684;AC=2;AF=0.166667;AN=12;AO=105;CIGAR=1X;DP=1921;DPB=1921;DPRA=0.68434;EPP=231.015;EPPR=3944.23;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997245;PAO=0;PQA=0;PQR=0;PRO=0;QA=3600;QR=62187;RO=1815;RPL=105;RPP=231.015;RPPR=3944.23;RPR=0;RUN=1;SAF=105;SAP=231.015;SAR=0;SRF=1815;SRP=3944.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:294:270,24:270:9257:24:809:0,-15.3825,-760.05 0/1:354:316,38:316:10763:38:1315:-12.0879,0,-862.092 0/1:136:119,16:119:4026:16:557:-9.61127,0,-321.704 0/0:326:299,27:299:10301:27:919:0,-15.1143,-844.07 0/0:447:447,0:447:15311:0:0:0,-134.56,-1377.82 0/0:364:364,0:364:12529:0:0:0,-109.575,-1127.53 dDocent_Contig_18 22 . T C 30966.2 . AB=0.0611247;ABP=687.268;AC=0;AF=0;AN=12;AO=25;CIGAR=1X3M1X;DP=1744;DPB=1744;DPRA=0;EPP=57.2971;EPPR=1523.04;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=967;QR=27509;RO=700;RPL=0;RPP=57.2971;RPPR=1523.04;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=700;SRP=1523.04;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:253:157,0,95:157:6129:0,95:0,3776:-263.598,-310.86,-814.66,0,-503.795,-475.197 0|0:337:213,0,122:213:8372:0,122:0,4875:-337.486,-401.605,-1090.2,0,-688.668,-651.943 0|0:153:74,1,77:74:2907:1,77:27,3050:-228.943,-249.092,-487.886,0,-237.169,-216.117 0|0:256:107,24,125:107:4204:24,125:940,4936:-373.905,-328.822,-667.355,0,-268.466,-308.131 0|0:398:75,0,322:75:2975:0,322:0,12825:-1033.43,-1056.01,-1300.91,0,-244.911,-147.979 0|0:347:74,0,270:74:2922:0,270:0,10754:-863.255,-885.531,-1125.96,0,-240.495,-159.217 dDocent_Contig_19 10 . T G 26312.7 . AB=0.258203;ABP=2138.94;AC=5;AF=0.416667;AN=12;AO=1102;CIGAR=1X;DP=5282;DPB=5282;DPRA=0;EPP=2395.97;EPPR=9073.25;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=43988;QR=167281;RO=4177;RPL=0;RPP=2395.97;RPPR=9073.25;RPR=1102;RUN=1;SAF=1102;SAP=2395.97;SAR=0;SRF=4177;SRP=9073.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:833:614,219:614:24600:219:8758:-536.947,0,-1961.03 0/1:945:672,272:672:26883:272:10834:-689.792,0,-2132.52 0/1:622:467,155:467:18770:155:6241:-374.171,0,-1500.43 0/1:856:592,264:592:23661:264:10511:-687.617,0,-1869.7 0/1:950:774,176:774:30893:176:7025:-345.944,0,-2491.51 0/0:1076:1058,16:1058:42474:16:619:0,-267.54,-3762.49 dDocent_Contig_20 98 . N C 2563.36 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=84;CIGAR=2X;DP=84;DPB=86.5;DPRA=0;EPP=185.414;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=2;PQA=67;PQR=0;PRO=0;QA=2840;QR=0;RO=0;RPL=84;RPP=185.414;RPPR=0;RPR=0;RUN=1;SAF=84;SAP=185.414;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:17:0,17:0:0:17:567:-51.3486,-5.11751,0 1|1:53:0,53:0:0:53:1802:-162.146,-15.9546,0 .:.:.:.:.:.:.:. 1|1:14:0,14:0:0:14:471:-42.3641,-4.21442,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_21 107 . N G 155.447 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.29832;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=169;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:169:-15.5426,-1.50515,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_22 11 . T C 112093 . AB=0.632982;ABP=878.554;AC=6;AF=0.5;AN=12;AO=3608;CIGAR=1X;DP=5700;DPB=5700;DPRA=0;EPP=7837.68;EPPR=4532.71;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999723;PAIREDR=0.998086;PAO=0;PQA=0;PQR=0;PRO=0;QA=143797;QR=83933;RO=2090;RPL=0;RPP=7837.68;RPPR=4541.39;RPR=3608;RUN=1;SAF=3608;SAP=7837.68;SAR=0;SRF=2089;SRP=4532.71;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:689:170,519:170:6836:519:20591:-1644.03,0,-407.503 0/1:1047:372,674:372:14897:674:26815:-2095.67,0,-1024.25 0/1:763:260,502:260:10424:502:20093:-1577.14,0,-707.948 0/1:850:252,598:252:10168:598:23925:-1895.26,0,-658.55 0/1:1252:618,634:618:24834:634:25295:-1897.41,0,-1855.87 0/1:1099:418,681:418:16774:681:27078:-2103.8,0,-1177.44 dDocent_Contig_23 152 . T C 76.4061 . AB=0.114286;ABP=138.696;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=880;DPB=880;DPRA=0.677419;EPP=29.068;EPPR=1885.68;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=436;QR=33331;RO=867;RPL=0;RPP=29.068;RPPR=1885.68;RPR=12;RUN=1;SAF=0;SAP=29.068;SAR=12;SRF=0;SRP=1885.68;SRR=867;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:82:81,0:81:3114:0:0:0,-24.3834,-280.156 0/0:100:100,0:100:3826:0:0:0,-30.103,-344.373 0/1:105:93,12:93:3594:12:436:-7.95937,0,-291.889 0/0:100:100,0:100:3882:0:0:0,-30.103,-349.395 0/0:308:308,0:308:11822:0:0:0,-92.7172,-1063.24 0/0:185:185,0:185:7093:0:0:0,-55.6905,-638.081 dDocent_Contig_24 38 . G A 155.634 . AB=0.119658;ABP=150.021;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=460;DPB=460;DPRA=1.70554;EPP=33.4109;EPPR=971.487;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=564;QR=17571;RO=446;RPL=0;RPP=33.4109;RPPR=971.487;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=446;SRP=971.487;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:90:90,0:90:3517:0:0:0,-27.0927,-316.575 0/0:76:76,0:76:3002:0:0:0,-22.8783,-270.269 0/0:85:85,0:85:3343:0:0:0,-25.5875,-300.932 0/0:24:24,0:24:960:0:0:0,-7.22472,-86.6992 0/1:117:103,14:103:4078:14:564:-15.8822,0,-331.781 0/0:68:68,0:68:2671:0:0:0,-20.47,-240.511 dDocent_Contig_25 15 . G T 1589.2 . AB=0.451613;ABP=5.53201;AC=4;AF=0.333333;AN=12;AO=58;CIGAR=1X;DP=224;DPB=224;DPRA=1.34483;EPP=128.956;EPPR=363.475;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2273;QR=6638;RO=166;RPL=0;RPP=128.956;RPPR=363.475;RPR=58;RUN=1;SAF=58;SAP=128.956;SAR=0;SRF=166;SRP=363.475;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:15,17:15:587:17:680:-51.8989,0,-43.5316 0/1:30:26,4:26:1033:4:155:-5.29437,0,-84.2318 0/0:71:69,2:69:2759:2:81:0,-13.6874,-240.73 0/1:44:11,33:11:450:33:1277:-101.956,0,-27.6105 0/1:18:16,2:16:639:2:80:-2.17304,0,-52.4269 0/0:29:29,0:29:1170:0:0:0,-8.72987,-105.579 dDocent_Contig_26 16 . G T 348.709 . AB=0.0853659;ABP=370.36;AC=1;AF=0.0833333;AN=12;AO=72;CIGAR=1M1I1X4M;DP=1630;DPB=1657.67;DPRA=1.58008;EPP=159.356;EPPR=3271.08;GTI=0;LEN=1;MEANALT=3.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2884;QR=59129;RO=1505;RPL=0;RPP=159.356;RPPR=3271.08;RPR=72;RUN=1;SAF=72;SAP=159.356;SAR=0;SRF=1505;SRP=3271.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:298:279,18,0:279:10970:18,0:724,0:0,-24.2246,-921.199,-83.9874,-926.618,-986.284 0|0:487:448,33,0:448:17634:33,0:1322,0:0,-25.901,-1466.58,-134.861,-1476.51,-1585.42 0|1:246:207,21,8:207:8160:21,8:838,319:-6.70604,0,-665,-42.748,-645.051,-711.658 0|0:297:292,0,0:292:11411:0,0:0,0:0,-87.9008,-1026,-87.9008,-1026,-1026 0|0:138:138,0,0:138:5408:0,0:0,0:0,-41.5421,-486.612,-41.5421,-486.612,-486.612 0|0:164:141,0,22:141:5546:0,22:0,865:-28.9785,-71.4237,-527.615,0,-456.471,-449.848 dDocent_Contig_27 21 . A G 174.61 . AB=0.12963;ABP=131.69;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=302;DPB=302;DPRA=1.32308;EPP=35.5824;EPPR=626.223;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.930314;PAO=0;PQA=0;PQR=0;PRO=0;QA=597;QR=10873;RO=287;RPL=0;RPP=35.5824;RPPR=626.223;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=287;SRP=626.223;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:32,0:32:1188:0:0:0,-9.63296,-107.219 0/0:64:63,1:63:2393:1:41:0,-15.1714,-211.487 0/0:34:34,0:34:1286:0:0:0,-10.235,-116.028 0/0:64:64,0:64:2419:0:0:0,-19.2659,-217.92 0/1:55:50,5:50:1904:5:200:-1.82327,0,-155.045 0/1:53:44,9:44:1683:9:356:-16.4446,0,-135.774 dDocent_Contig_29 107 . N T 159.652 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=161;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:66:-6.26831,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:60:-5.69857,-0.60206,0 dDocent_Contig_30 15 . G A 4135.47 . AB=0.340564;ABP=104.796;AC=4;AF=0.333333;AN=12;AO=160;CIGAR=1X;DP=861;DPB=861;DPRA=0.5175;EPP=350.446;EPPR=1523.04;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6267;QR=27600;RO=700;RPL=0;RPP=350.446;RPPR=1523.04;RPR=160;RUN=1;SAF=160;SAP=350.446;SAR=0;SRF=700;SRP=1523.04;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:82:42,40:42:1620:40:1571:-116.953,0,-121.357 0/1:115:72,42:72:2837:42:1664:-115.266,0,-220.717 0/1:189:147,42:147:5800:42:1639:-90.8409,0,-464.938 0/1:75:42,33:42:1675:33:1280:-92.8924,0,-128.406 0/0:240:240,0:240:9440:0:0:0,-72.2472,-849.089 0/0:160:157,3:157:6228:3:113:0,-37.627,-549.749 dDocent_Contig_31 98 . N G 252.171 . AB=0;ABP=0;AC=10;AF=0.833333;AN=12;AO=10;CIGAR=1X;DP=12;DPB=12;DPRA=2.2;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=257;QR=0;RO=0;RPL=10;RPP=24.725;RPPR=0;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:1:0,0:0:0:0:0:0,0,0 1/1:3:0,3:0:0:3:77:-7.18572,-0.90309,0 1/1:2:0,2:0:0:2:43:-4.0837,-0.60206,0 1/1:3:0,3:0:0:3:71:-6.62505,-0.90309,0 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 1/1:2:0,1:0:0:1:33:-3.09918,-0.30103,0 dDocent_Contig_32 23 . C A 6806.57 . AB=0.274052;ABP=459.304;AC=2;AF=0.166667;AN=12;AO=311;CIGAR=1X;DP=2627;DPB=2627;DPRA=1.16823;EPP=678.338;EPPR=5032.14;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999136;PAO=0;PQA=0;PQR=0;PRO=0;QA=12176;QR=92607;RO=2316;RPL=0;RPP=678.338;RPPR=5032.14;RPR=311;RUN=1;SAF=311;SAP=678.338;SAR=0;SRF=2316;SRP=5032.14;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:384:384,0:384:15405:0:0:0,-115.596,-1385.23 0/0:505:481,24:481:19124:24:959:0,-65.4092,-1632.98 0/0:279:277,2:277:11025:2:79:0,-76.4901,-983.995 0/0:430:427,3:427:17142:3:121:0,-118.163,-1530.09 0/1:577:446,131:446:17899:131:5069:-282.426,0,-1435.69 0/1:452:301,151:301:12012:151:5948:-399.044,0,-944.138 dDocent_Contig_33 23 . G T 33.9554 . AB=0.0918367;ABP=144.821;AC=1;AF=0.0833333;AN=12;AO=29;CIGAR=1X;DP=823;DPB=823;DPRA=0.862583;EPP=65.983;EPPR=1727.16;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998741;PAO=0;PQA=0;PQR=0;PRO=0;QA=1133;QR=31541;RO=794;RPL=0;RPP=65.983;RPPR=1727.16;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=794;SRP=1727.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:116:108,8:108:4279:8:324:0,-5.39066,-355.541 0/1:98:89,9:89:3542:9:365:-3.71412,0,-289.31 0/0:219:212,7:212:8462:7:241:0,-43.9126,-739.092 0/0:88:83,5:83:3219:5:203:0,-7.83758,-271.127 0/0:157:157,0:157:6291:0:0:0,-47.2617,-565.923 0/0:145:145,0:145:5748:0:0:0,-43.6493,-517.128 dDocent_Contig_34 1 . N G 363.245 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=10;CIGAR=1X;DP=10;DPB=10;DPRA=0;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=392;QR=0;RO=0;RPL=0;RPP=24.725;RPPR=0;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:187:-17.1863,-1.50515,0 ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:205:-18.835,-1.50515,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_35 62 . G T 56.1676 . AB=0.179487;ABP=37.8095;AC=3;AF=0.25;AN=12;AO=24;CIGAR=1X;DP=333;DPB=333;DPRA=0;EPP=55.1256;EPPR=673.995;GTI=0;LEN=1;MEANALT=1;MQM=19.6667;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=912;QR=11536;RO=309;RPL=24;RPP=55.1256;RPPR=673.995;RPR=0;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=309;SRP=673.995;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:93:89,4:89:3314:4:139:0,-21.715,-292.115 0/0:70:62,8:62:2290:8:318:0,-10.1325,-195.375 0/0:70:68,2:68:2579:2:78:0,-18.2254,-229.451 0/0:60:58,2:58:2134:2:80:0,-15.2143,-189.438 1/1:1:0,1:0:0:1:31:-1.48956,-0.30103,0 0/1:39:32,7:32:1219:7:266:-4.13683,0,-98.2617 dDocent_Contig_36 22 . C T 478.097 . AB=0.126685;ABP=452.107;AC=1;AF=0.0833333;AN=12;AO=48;CIGAR=1X;DP=1514;DPB=1514;DPRA=1.40991;EPP=107.241;EPPR=3184.22;GTI=0;LEN=1;MEANALT=1;MQM=59.9375;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992491;PAO=0;PQA=0;PQR=0;PRO=0;QA=1788;QR=58058;RO=1465;RPL=0;RPP=107.241;RPPR=3184.22;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=1465;SRP=3184.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:213:212,0:212:8358:0:0:0,-63.8184,-751.671 0/0:255:254,1:254:10086:1:15:0,-75.2627,-905.588 0/0:152:152,0:152:6072:0:0:0,-45.7566,-546.248 0/0:240:240,0:240:9429:0:0:0,-72.2472,-848.057 0/1:371:324,47:324:12906:47:1773:-48.1284,0,-1048.93 0/0:283:283,0:283:11207:0:0:0,-85.1915,-1007.9 dDocent_Contig_37 30 . A G 748.069 . AB=0.17037;ABP=130.419;AC=1;AF=0.0833333;AN=12;AO=23;CIGAR=10M1X1M1D2X2M;DP=460;DPB=460.529;DPRA=0.823171;EPP=52.9542;EPPR=797.769;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=1;PAIREDR=0.986339;PAO=0;PQA=0;PQR=0;PRO=0;QA=888;QR=14339;RO=366;RPL=0;RPP=52.9542;RPPR=797.769;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=366;SRP=797.769;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:79:60,0,2,7,1,6:60:2347:0,2,7,1,6:0,69,285,41,234:-5.46576,-23.5276,-216.507,-17.9264,-210.903,-210.301,0,-192.995,-187.391,-190.887,-20.1417,-213.123,-207.519,-189.61,-212.822,-4.28995,-197.275,-191.671,-173.762,-193.89,-195.469 0|0:65:57,0,2,2,1,3:57:2205:0,2,2,1,3:0,66,78,40,120:0,-17.1587,-198.275,-11.8389,-192.94,-192.338,-10.7438,-191.863,-186.528,-191.261,-13.8608,-194.979,-189.645,-188.568,-194.678,-7.26211,-188.389,-183.055,-181.978,-185.094,-187.486 0|0:115:103,0,4,0,5,2:103:4050:0,4,0,5,2:0,152,0,204,75:0,-31.0061,-364.146,-18.5441,-351.681,-350.477,-31.0061,-364.146,-351.681,-364.146,-14.159,-347.314,-334.849,-347.314,-345.808,-24.8662,-358.004,-345.54,-358.004,-341.172,-357.402 0|0:66:61,0,4,0,0,0:61:2393:0,4,0,0,0:0,151,0,0,0:0,-18.3628,-215.192,-5.90047,-202.816,-201.612,-18.3628,-215.192,-202.816,-215.192,-18.3628,-215.192,-202.816,-215.192,-215.192,-18.3628,-215.192,-202.816,-215.192,-215.192,-215.192 0|0:65:46,3,4,0,10,0:46:1810:3,4,0,10,0:119,152,0,405,0:-19.5721,-23.6207,-171.623,-20.9558,-160.062,-168.654,-33.4195,-172.526,-169.859,-182.322,0,-139.129,-136.462,-148.925,-145.915,-33.4195,-172.526,-169.859,-182.322,-148.925,-182.322 0|1:70:39,20,0,0,6,5:39:1534:20,0,0,6,5:769,0,0,221,203:-51.3785,0,-120.171,-63.1187,-126.192,-189.309,-63.1187,-126.192,-189.309,-189.309,-45.0584,-108.131,-171.247,-171.247,-169.441,-46.3722,-109.448,-172.565,-172.565,-154.503,-171.06 dDocent_Contig_38 12 . A T 90650.6 . AB=0.894624;ABP=631.985;AC=11;AF=0.916667;AN=12;AO=2789;CIGAR=1X;DP=2949;DPB=2949;DPRA=0;EPP=6059.25;EPPR=348.274;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999641;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=106618;QR=6069;RO=159;RPL=0;RPP=6059.25;RPPR=348.274;RPR=2789;RUN=1;SAF=2789;SAP=6059.25;SAR=0;SRF=159;SRP=348.274;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:465:48,416:48:1811:416:15947:-1294.6,0,-23.4614 1/1:477:17,460:17:620:460:17606:-1527.43,-87.4669,0 1/1:288:13,275:13:506:275:10517:-900.203,-40.8108,0 1/1:649:36,613:36:1408:613:23406:-1978.11,-68.3782,0 1/1:405:19,386:19:748:386:14793:-1262.96,-54.2696,0 1/1:665:26,639:26:976:639:24349:-2101.78,-112.038,0 dDocent_Contig_40 191 . C A 120478 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=5267;CIGAR=1X;DP=5407;DPB=5407;DPRA=0;EPP=11440.2;EPPR=248.387;GTI=0;LEN=1;MEANALT=2.83333;MQM=59.9953;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.759825;PAIREDR=0.699115;PAO=0;PQA=0;PQR=0;PRO=0;QA=135242;QR=1376;RO=113;RPL=5267;RPP=11440.2;RPPR=248.387;RPR=0;RUN=1;SAF=0;SAP=11440.2;SAR=5267;SRF=0;SRP=248.387;SRR=113;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:752:16,734:16:210:734:19185:-1707.61,-206.833,0 1/1:1155:23,1124:23:252:1124:28744:-2564.05,-322.588,0 1/1:733:21,709:21:247:709:17901:-1588.78,-197.539,0 1/1:890:17,867:17:211:867:21937:-1955.19,-247.108,0 1/1:901:23,875:23:272:875:22361:-1987.86,-245.903,0 1/1:976:13,958:13:184:958:25114:-2243.49,-275.707,0 dDocent_Contig_41 31 . T C 7292.98 . AB=0.481481;ABP=4.53837;AC=6;AF=0.5;AN=12;AO=247;CIGAR=1X;DP=513;DPB=513;DPRA=0;EPP=539.364;EPPR=578.45;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.9514;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.793522;PAIREDR=0.611321;PAO=0;PQA=0;PQR=0;PRO=0;QA=9847;QR=10327;RO=265;RPL=0;RPP=539.364;RPPR=578.45;RPR=247;RUN=1;SAF=247;SAP=539.364;SAR=0;SRF=265;SRP=578.45;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:92:44,47:44:1719:47:1872:-141.194,0,-127.456 0/1:97:59,38:59:2295:38:1500:-106.04,0,-177.541 0/1:67:32,35:32:1242:35:1400:-106.086,0,-91.8889 0/1:87:51,36:51:1981:36:1424:-102.209,0,-152.314 0/1:93:32,61:32:1260:61:2440:-191.683,0,-85.6806 0/1:77:47,30:47:1830:30:1211:-86.0832,0,-141.748 dDocent_Contig_42 28 . T C 16742.1 . AB=0.414035;ABP=94.4788;AC=6;AF=0.5;AN=12;AO=590;CIGAR=1X;DP=1425;DPB=1425;DPRA=0;EPP=1284.18;EPPR=1814.02;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.333898;PAIREDR=0.854916;PAO=0;PQA=0;PQR=0;PRO=0;QA=23411;QR=33333;RO=834;RPL=0;RPP=1284.18;RPPR=1814.02;RPR=590;RUN=1;SAF=590;SAP=1284.18;SAR=0;SRF=834;SRP=1814.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:222:121,101:121:4786:101:4012:-294.236,0,-363.818 0/1:229:119,110:119:4776:110:4346:-322.159,0,-360.802 0/1:135:79,56:79:3186:56:2221:-159.419,0,-246.156 0/1:222:115,107:115:4588:107:4254:-315.996,0,-346.013 0/1:321:197,123:197:7860:123:4897:-344.192,0,-610.548 0/1:296:203,93:203:8137:93:3681:-242.209,0,-642.756 dDocent_Contig_43 9 . C T 28257.8 . AB=0.473223;ABP=15.8023;AC=6;AF=0.5;AN=12;AO=972;CIGAR=1X2M1X;DP=2054;DPB=2054;DPRA=0;EPP=2113.68;EPPR=1581.97;GTI=0;LEN=1;MEANALT=4.16667;MQM=58.7438;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.996914;PAIREDR=0.883388;PAO=0;PQA=0;PQR=0;PRO=0;QA=37887;QR=35322;RO=909;RPL=0;RPP=2113.68;RPPR=1976.88;RPR=972;RUN=1;SAF=972;SAP=2113.68;SAR=0;SRF=861;SRP=1581.97;SRR=48;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:329:129,27,160:129:5029:27,160:1054,6224:-470.594,-422.789,-828.01,0,-326.712,-365.185 0|1:449:202,34,199:202:7836:34,199:1341,7798:-579.609,-530.084,-1163.61,0,-533.432,-583.861 0|1:199:89,15,94:89:3471:15,94:558,3654:-272.329,-253.465,-534.252,0,-239.66,-257.018 0|1:432:170,36,206:170:6566:36,206:1380,8036:-604.073,-542.483,-1070.86,0,-426.449,-477.203 0|1:316:136,0,179:136:5288:0,179:0,6945:-528.724,-569.664,-1004.2,0,-434.811,-380.926 0|1:329:183,0,134:183:7132:0,134:0,5230:-374.443,-429.531,-1015.71,0,-586.169,-545.831 dDocent_Contig_44 63 . T C 199.034 . AB=0.155556;ABP=95.7563;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=370;DPB=370;DPRA=1.07054;EPP=37.7539;EPPR=771.712;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.875;PAIREDR=0.858757;PAO=0;PQA=0;PQR=0;PRO=0;QA=585;QR=13276;RO=354;RPL=7;RPP=3.55317;RPPR=7.15695;RPR=9;RUN=1;SAF=7;SAP=3.55317;SAR=9;SRF=164;SRP=7.15695;SRR=190;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:40,0:40:1472:0:0:0,-12.0412,-132.745 0/0:55:55,0:55:2043:0:0:0,-16.5566,-184.104 0/0:39:37,2:37:1386:2:63:0,-5.75673,-119.033 0/1:90:76,14:76:2873:14:522:-20.2222,0,-231.642 0/0:78:78,0:78:2920:0:0:0,-23.4803,-262.957 0/0:68:68,0:68:2582:0:0:0,-20.47,-232.563 dDocent_Contig_45 1 . N G 109.633 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=110;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:39:-3.89656,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:71:-6.74038,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_46 17 . G T 8363.74 . AB=0.156797;ABP=3337.29;AC=5;AF=0.416667;AN=12;AO=527;CIGAR=1X;DP=3790;DPB=3790;DPRA=0;EPP=1147.38;EPPR=7084.18;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=20862;QR=127785;RO=3261;RPL=0;RPP=1147.38;RPPR=7084.18;RPR=527;RUN=1;SAF=527;SAP=1147.38;SAR=0;SRF=3261;SRP=7084.18;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:531:515,16:515:20230:16:630:0,-102.814,-1762.17 0/1:608:531,77:531:20838:77:2998:-86.8873,0,-1690.87 0/1:506:452,53:452:17694:53:2129:-39.361,0,-1438.79 0/1:502:418,84:418:16391:84:3334:-149.011,0,-1322.94 0/1:811:650,160:650:25484:160:6359:-327.841,0,-2047.38 0/1:832:695,137:695:27148:137:5412:-236.475,0,-2190.76 dDocent_Contig_47 31 . G T 431.867 . AB=0.208333;ABP=73.9451;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1X;DP=240;DPB=240;DPRA=1.68182;EPP=52.9542;EPPR=474.22;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.652174;PAIREDR=0.640553;PAO=0;PQA=0;PQR=0;PRO=0;QA=924;QR=8540;RO=217;RPL=0;RPP=52.9542;RPPR=474.22;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=217;SRP=474.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:1023:0:0:0,-7.82678,-92.3687 0/0:44:43,1:43:1694:1:40:0,-9.24964,-148.69 0/1:52:39,13:39:1539:13:518:-31.3122,0,-123.104 0/1:44:37,7:37:1475:7:284:-12.6881,0,-119.755 0/0:45:43,2:43:1689:2:82:0,-5.76667,-144.464 0/0:29:29,0:29:1120:0:0:0,-8.72987,-101.079 dDocent_Contig_48 36 . C T 155.848 . AB=0.183673;ABP=45.5977;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=2X;DP=379;DPB=379;DPRA=0.994737;EPP=44.2683;EPPR=782.569;GTI=0;LEN=1;MEANALT=1.33333;MQM=54.6842;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.842105;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=737;QR=14163;RO=359;RPL=0;RPP=44.2683;RPPR=782.569;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=359;SRP=782.569;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:67:67,0:67:2660:0:0:0,-20.169,-239.538 0|0:76:71,5:71:2784:5:202:0,-5.36982,-233.17 0|1:49:39,9:39:1513:9:338:-15.9035,0,-121.553 0|0:64:59,5:59:2349:5:197:0,-2.98778,-195.294 0|0:37:37,0:37:1470:0:0:0,-11.1381,-132.551 0|0:86:86,0:86:3387:0:0:0,-25.8886,-304.886 dDocent_Contig_49 8 . T G 13428.2 . AB=0.190374;ABP=781.584;AC=6;AF=0.5;AN=12;AO=178;CIGAR=1X4M;DP=1054;DPB=1054;DPRA=0;EPP=389.532;EPPR=1014.92;GTI=0;LEN=1;MEANALT=3.4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6849;QR=18156;RO=466;RPL=0;RPP=389.532;RPPR=1014.92;RPR=178;RUN=1;SAF=178;SAP=389.532;SAR=0;SRF=466;SRP=1014.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:152:66,78,7:66:2590:78,7:3021,271:-228.313,0,-189.546,-225.919,-190.765,-436.824 0|1:220:70,39,107:70:2715:39,107:1493,4119:-317.128,-215.683,-426.991,0,-100.535,-190.841 0|1:164:82,56,25:82:3206:56,25:2166,953:-153.233,0,-246.743,-99.742,-185.426,-355.807 0|1:203:93,78,31:93:3612:78,31:2995,1198:-217.834,0,-273.303,-147.431,-198.386,-434.883 0|1:119:60,58,0:60:2345:58,0:2257,0:-167.416,0,-175.321,-185.477,-192.78,-378.267 0|1:196:95,93,8:95:3688:93,8:3553,308:-262.897,0,-275.026,-266.205,-277.732,-566.818 dDocent_Contig_50 11 . G A 746.437 . AB=0.163498;ABP=261.68;AC=4;AF=0.333333;AN=12;AO=47;CIGAR=1X;DP=376;DPB=376;DPRA=1.50909;EPP=105.07;EPPR=717.425;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.978723;PAIREDR=0.978723;PAO=0;PQA=0;PQR=0;PRO=0;QA=1884;QR=13212;RO=329;RPL=0;RPP=105.07;RPPR=717.425;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=329;SRP=717.425;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:62:53,9:53:2140:9:356:-13.7341,0,-174.11 0/0:69:65,4:65:2621:4:164:0,-5.62117,-220.863 0/1:46:37,9:37:1444:9:364:-19.277,0,-116.36 0/1:84:74,10:74:2981:10:404:-11.4335,0,-243.085 0/0:44:44,0:44:1768:0:0:0,-13.2453,-159.335 0/1:71:56,15:56:2258:15:596:-32.6045,0,-182.003 dDocent_Contig_51 11 . G T 223.024 . AB=0.130435;ABP=166.72;AC=4;AF=0.333333;AN=12;AO=20;CIGAR=1X;DP=215;DPB=215;DPRA=1.06471;EPP=46.4397;EPPR=426.447;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.3;PAIREDR=0.471795;PAO=0;PQA=0;PQR=0;PRO=0;QA=800;QR=7750;RO=195;RPL=0;RPP=46.4397;RPPR=426.447;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=195;SRP=426.447;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:35,6:35:1405:6:235:-9.17506,0,-114.363 0/1:48:41,7:41:1626:7:279:-11.0311,0,-132.118 0/1:17:15,2:15:603:2:82:-2.66217,0,-49.4911 0/1:32:29,3:29:1147:3:123:-1.83183,0,-93.8778 0/0:34:34,0:34:1339:0:0:0,-10.235,-120.771 0/0:43:41,2:41:1630:2:81:0,-5.25856,-139.237 dDocent_Contig_52 104 . G T 148.524 . AB=0.272727;ABP=12.8806;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=150;DPB=150;DPRA=0.859375;EPP=16.0391;EPPR=298.572;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.2361;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.6875;PAO=0;PQA=0;PQR=0;PRO=0;QA=238;QR=5529;RO=144;RPL=6;RPP=16.0391;RPPR=298.572;RPR=0;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=315.702;SRR=144;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:941:0:0:0,-7.52575,-84.9334 0/0:25:25,0:25:935:0:0:0,-7.52575,-84.4356 0/0:20:20,0:20:776:0:0:0,-6.0206,-70.158 0/1:22:16,6:16:598:6:238:-15.1711,0,-47.4156 0/0:28:28,0:28:1100:0:0:0,-8.42884,-99.2771 0/0:30:30,0:30:1179:0:0:0,-9.0309,-106.372 dDocent_Contig_53 67 . C A 70229.7 . AB=0.585608;ABP=259.546;AC=6;AF=0.5;AN=12;AO=2360;CIGAR=3M1X;DP=4030;DPB=4095.5;DPRA=0;EPP=5127.69;EPPR=2858.5;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=90451;QR=48034;RO=1315;RPL=2360;RPP=5127.69;RPPR=2858.5;RPR=0;RUN=1;SAF=2360;SAP=5127.69;SAR=0;SRF=1315;SRP=2858.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:591:196,1,386:196:7055:1,386:36,14659:-1142.92,-1198.99,-1774.25,0,-572.632,-459.371 0|1:615:253,1,325:253:9150:1,325:39,12343:-935.85,-1008.8,-1755.33,0,-743.623,-648.994 0|1:540:181,0,358:181:6750:0,358:0,13762:-1075.43,-1129.91,-1682.49,0,-552.844,-445.075 0|1:705:199,9,454:199:7229:9,454:343,17471:-1374.32,-1406.09,-1993.68,0,-562.145,-453.615 0|1:828:223,140,461:223:8134:140,461:5304,17784:-1393.13,-1025.43,-1647.73,0,-229.61,-525.677 0|1:751:263,111,376:263:9716:111,376:4190,14432:-1105.31,-841.097,-1602.35,0,-451.28,-681.482 dDocent_Contig_54 36 . T C 107387 . AB=0.672763;ABP=1335.54;AC=6;AF=0.5;AN=12;AO=3458;CIGAR=1X2M1X;DP=5140;DPB=5140;DPRA=0;EPP=7511.96;EPPR=3638.06;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999711;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=136666;QR=65976;RO=1674;RPL=0;RPP=7511.96;RPPR=3638.06;RPR=3458;RUN=1;SAF=3458;SAP=7511.96;SAR=0;SRF=1674;SRP=3638.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:539:99,440:99:3903:440:17340:-1397.1,0,-189.048 0|1:839:208,631:208:8177:631:24972:-1992.88,0,-483.008 0|1:513:126,385:126:4983:385:15255:-1217.63,0,-294.172 0|1:815:291,522:291:11455:522:20667:-1613.29,0,-785.143 0|1:1215:570,644:570:22547:644:25398:-1917.92,0,-1661.62 0|1:1219:380,836:380:14911:836:33034:-2603.92,0,-974.648 dDocent_Contig_62 25 . C T 158.271 . AB=0;ABP=0;AC=4;AF=0.333333;AN=12;AO=3;CIGAR=2M13I2M1X3M1X2M1X1M;DP=49;DPB=82.3846;DPRA=1.0625;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=4.5;MQM=27;MQMR=0;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:5:0,0,0:0:0:0,0:0,0:0,0,0,0,0,0 1|1:10:0,0,1:0:0:0,1:0,27:-2.17494,-2.17494,-2.17494,-0.30103,-0.30103,0 0|0:7:0,0,0:0:0:0,0:0,0:0,0,0,0,0,0 0|0:9:0,0,0:0:0:0,0:0,0:0,0,0,0,0,0 0|0:11:0,3,0:0:0:3,0:99,0:-8.1582,-0.90309,0,-8.1582,-0.90309,-8.1582 1|1:7:0,0,2:0:0:0,2:0,54:-4.35615,-4.35615,-4.35615,-0.60206,-0.60206,0 dDocent_Contig_64 9 . A C 28767.8 . AB=0.0802239;ABP=6566.04;AC=0;AF=0;AN=12;AO=344;CIGAR=1M1I1M1X2M1X3M1X3M2X1M1D2X;DP=4288;DPB=4353.32;DPRA=0;EPP=749.997;EPPR=194.462;GTI=0;LEN=1;MEANALT=94.6667;MQM=32.4942;MQMR=59.5;NS=6;NUMALT=7;ODDS=0;PAIRED=0.991279;PAIREDR=0.958333;PAO=0;PQA=0;PQR=26.6667;PRO=0.666667;QA=13502;QR=3733;RO=96;RPL=0;RPP=749.997;RPPR=211.472;RPR=344;RUN=1;SAF=344;SAP=749.997;SAR=0;SRF=94;SRP=194.462;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:805:28,61,68,93,78,64,102,37:28:1092:61,68,93,78,64,102,37:2407,2569,3009,2994,2507,3837,1412:-459.183,-316.869,-388.211,-257.08,-196.043,-326.316,-249.435,-188.399,-128.609,-311.144,-224.327,-163.29,-103.501,-95.8567,-290.553,-261.472,-200.435,-140.646,-133.001,-107.893,-331.912,-153.579,-92.5423,-32.753,-25.1087,0,-37.1446,-212.58,-351.774,-290.737,-230.948,-223.303,-198.195,-235.34,-127.447,-430.341 0|0:837:17,71,96,66,66,69,96,44:17:660:71,96,66,66,69,96,44:2801,3536,2114,2522,2701,3559,1681:-520.706,-343.634,-376.394,-236.735,-108.679,-261.968,-372.686,-244.63,-137.73,-406.95,-320.464,-192.407,-85.5071,-221.459,-354.728,-304.75,-176.694,-69.7934,-205.745,-153.523,-338.112,-234.957,-106.9,0,-135.952,-83.729,-68.0153,-260.19,-387.906,-259.849,-152.949,-288.901,-236.678,-220.965,-151.171,-428.793 0|0:420:13,35,35,42,38,43,53,34:13:512:35,35,42,38,43,53,34:1358,1331,1330,1469,1687,1973,1321:-253.795,-170.686,-202.271,-148.553,-103.653,-180.138,-161.942,-117.042,-94.9084,-191.419,-137.908,-93.0084,-70.8744,-84.264,-168.591,-118.97,-74.0696,-51.9356,-65.3253,-41.291,-148.147,-96.6173,-51.7177,-29.5835,-42.9735,-18.9389,0,-122.784,-149.159,-104.259,-82.1254,-95.5148,-71.4809,-52.542,-30.1899,-181.046 0|0:850:13,81,60,83,70,126,65,45:13:507:81,60,83,70,126,65,45:3165,2280,2709,2639,4952,2353,1713:-575.239,-373.644,-390.937,-392.175,-228.342,-415.789,-382.432,-218.601,-237.13,-399.122,-365.142,-201.31,-219.839,-210.097,-385.745,-172.336,-8.50383,-27.033,-17.2918,0,-176.082,-388.052,-224.22,-242.75,-233.008,-215.717,-22.9106,-410.161,-438.649,-274.817,-293.346,-283.604,-266.313,-73.5074,-289.224,-466.778 0|0:551:1,34,29,57,109,64,51,41:1:38:34,29,57,109,64,51,41:1336,1082,1856,4179,2491,1906,1575:-540.674,-453.209,-446.09,-452.397,-367.748,-446.784,-406.496,-321.847,-321.035,-392.454,-201.097,-116.448,-115.636,-69.7366,-171.402,-336.762,-252.113,-251.301,-205.4,0,-320.613,-385.068,-300.419,-299.606,-253.706,-48.3063,-183.971,-372.832,-411.693,-327.044,-326.231,-280.331,-74.9313,-210.596,-258.902,-402.467 0|0:825:24,62,87,65,90,104,37,66:24:924:62,87,65,90,104,37,66:2435,3277,2126,3437,4077,1357,2494:-531.176,-378.633,-435.83,-269.9,-185.994,-319.572,-383.597,-299.69,-190.958,-439.891,-259.395,-175.488,-66.755,-180.452,-308.163,-203.146,-119.239,-10.5056,-124.203,0,-247.7,-427.815,-343.908,-235.175,-348.872,-224.67,-168.421,-492.538,-334.26,-250.353,-141.62,-255.317,-131.114,-74.8649,-299.534,-390.253 dDocent_Contig_66 6 . T A 447.109 . AB=0.222222;ABP=9.04217;AC=1;AF=0.125;AN=8;AO=2;CIGAR=1M6I2M1X3M1X6M1X2M2X1M1X1M;DP=19;DPB=331.318;DPRA=2.7;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=4;MQM=57;MQMR=0;NS=4;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0;PAO=275;PQA=10954.7;PQR=9902.17;PRO=248;QA=78;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:3:0,0,0,0,2:0:0:0,0,0,2:0,0,0,74:-6.65211,-6.65211,-6.65211,-6.65211,-6.65211,-6.65211,-6.65211,-6.65211,-6.65211,-6.65211,-0.60206,-0.60206,-0.60206,-0.60206,0 0|0:2:0,0,0,0,2:0:0:0,0,0,2:0,0,0,74:-6.65216,-6.65216,-6.65216,-6.65216,-6.65216,-6.65216,-6.65216,-6.65216,-6.65216,-6.65216,-0.60206,-0.60206,-0.60206,-0.60206,0 .:.:.:.:.:.:.:. 0|0:5:0,4,0,0,0:0:0:4,0,0,0:132,0,0,0:-10.7962,-1.20412,0,-10.7962,-1.20412,-10.7962,-10.7962,-1.20412,-10.7962,-10.7962,-10.7962,-1.20412,-10.7962,-10.7962,-10.7962 .:.:.:.:.:.:.:. 1|0:9:0,0,2,5,1:0:0:0,2,5,1:0,78,177,32:-20.7668,-20.7668,-20.7668,-14.3611,-14.3611,-13.7591,-6.40564,-6.40564,0,-4.90049,-18.1891,-18.1891,-11.7835,-3.82799,-17.8881 dDocent_Contig_68 12 . C A 207.514 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=6;CIGAR=2X7M1X3M10I1X3M;DP=36;DPB=46.5882;DPRA=1.2069;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=51;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=218;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:7:0,6:0:0:6:218:-19.6441,-1.80618,0 1|1:5:0,0:0:0:0:0:0,0,0 1|1:4:0,0:0:0:0:0:0,0,0 1|1:2:0,0:0:0:0:0:0,0,0 1|1:10:0,0:0:0:0:0:0,0,0 1|1:8:0,0:0:0:0:0:0,0,0 dDocent_Contig_72 7 . C T 2345.62 . AB=0.482857;ABP=3.90371;AC=6;AF=0.5;AN=12;AO=169;CIGAR=1X3M1D1M2X;DP=350;DPB=329.25;DPRA=0;EPP=369.989;EPPR=376.504;GTI=0;LEN=1;MEANALT=2.16667;MQM=22.6686;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.83432;PAIREDR=0.767442;PAO=0;PQA=0;PQR=0;PRO=0;QA=6520;QR=6713;RO=172;RPL=0;RPP=369.989;RPPR=376.504;RPR=169;RUN=1;SAF=169;SAP=369.989;SAR=0;SRF=172;SRP=376.504;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:57:37,20:37:1451:20:778:-25.4186,0,-113.699 0|1:77:39,37:39:1515:37:1433:-44.9612,0,-113.668 0|1:45:29,14:29:1132:14:545:-12.8989,0,-88.8504 0|1:75:35,37:35:1367:37:1426:-47.4374,0,-101.36 0|1:34:11,21:11:424:21:809:-37.0889,0,-28.6052 0|1:62:21,40:21:824:40:1529:-70.7545,0,-55.7095 dDocent_Contig_73 10 . G C 3388.8 . AB=0.0125112;ABP=2312.81;AC=6;AF=0.5;AN=12;AO=14;CIGAR=1M8I2M1X;DP=2114;DPB=2895.5;DPRA=0;EPP=33.4109;EPPR=3444.8;GTI=0;LEN=1;MEANALT=22.3333;MQM=33;MQMR=50.0359;NS=6;NUMALT=5;ODDS=2.22045e-16;PAIRED=1;PAIREDR=0.984267;PAO=0;PQA=0;PQR=0;PRO=0;QA=556;QR=60791;RO=1589;RPL=0;RPP=33.4109;RPPR=3453.48;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=1588;SRP=3444.8;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:401:319,0,0,55,0,4:319:12211:0,0,55,0,4:0,0,2149,0,157:-43.2631,-139.292,-1080.16,-139.292,-1080.16,-1080.16,0,-940.885,-940.885,-924.328,-139.292,-1080.16,-1080.16,-940.885,-1080.16,-126.732,-1067.61,-1067.61,-928.329,-1067.61,-1066.4 0|1:514:374,0,0,69,5,0:374:14303:0,0,69,5,0:0,0,2736,196,0:-60.3924,-172.978,-1246.7,-172.978,-1246.7,-1246.7,0,-1073.74,-1073.74,-1052.97,-160.06,-1233.78,-1233.78,-1060.82,-1232.28,-172.978,-1246.7,-1246.7,-1073.74,-1233.78,-1246.7 0|1:258:187,4,1,35,6,0:187:7188:4,1,35,6,0:158,37,1372,240,0:-31.5153,-77.448,-634.204,-85.2696,-632.87,-642.927,0,-547.617,-555.437,-547.439,-72.2185,-619.821,-627.642,-542.389,-628.373,-87.8079,-635.408,-643.229,-557.975,-630.18,-645.766 0|1:354:293,0,1,44,0,0:293:11228:0,1,44,0,0:0,38,1732,0,0:-24.1381,-112.34,-950.386,-111.835,-949.878,-949.577,0,-838.057,-837.549,-824.811,-112.34,-950.386,-949.878,-838.057,-950.386,-112.34,-950.386,-949.878,-838.057,-950.386,-950.386 0|1:240:178,0,3,44,0,0:178:6783:0,3,44,0,0:0,116,1736,0,0:-57.2867,-110.87,-637.148,-103.163,-629.442,-628.539,0,-526.324,-518.618,-513.078,-110.87,-637.148,-629.442,-526.324,-637.148,-110.87,-637.148,-629.442,-526.324,-637.148,-637.148 0|1:347:238,0,1,78,3,0:238:9078:0,1,78,3,0:0,40,3070,120,0:-126.282,-197.927,-872.252,-195.329,-869.654,-869.353,0,-674.372,-671.774,-650.892,-190.132,-864.459,-861.861,-666.579,-863.556,-197.927,-872.252,-869.654,-674.372,-864.459,-872.252 dDocent_Contig_75 10 . C T 14251.8 . AB=0.455896;ABP=21.2067;AC=6;AF=0.5;AN=12;AO=491;CIGAR=1X;DP=1077;DPB=1077;DPRA=0;EPP=1069.2;EPPR=1273.32;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.1487;MQMR=58.8769;NS=6;NUMALT=1;ODDS=0;PAIRED=0.995927;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=19573;QR=23264;RO=585;RPL=0;RPP=1069.2;RPPR=1273.32;RPR=491;RUN=1;SAF=491;SAP=1069.2;SAR=0;SRF=585;SRP=1273.32;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:189:102,86:102:4067:86:3404:-246.232,0,-307.731 0/1:279:164,115:164:6520:115:4609:-327.414,0,-494.425 0/1:108:71,37:71:2814:37:1448:-98.0636,0,-214.171 0/1:193:104,89:104:4135:89:3562:-261.748,0,-312.12 0/1:119:53,66:53:2123:66:2620:-198.936,0,-155.415 0/1:189:91,98:91:3605:98:3930:-296.783,0,-265.504 dDocent_Contig_77 98 . N C 103.835 . AB=0;ABP=0;AC=4;AF=0.666667;AN=6;AO=3;CIGAR=1X;DP=4;DPB=4;DPRA=1.5;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=101;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 ./.:.:.:.:.:.:.:. 0/0:1:0,0:0:0:0:0:0,0,0 dDocent_Contig_78 1 . N G 142.374 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=4.60517;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=154;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:154:-14.2331,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_79 188 . A T 270.558 . AB=0.131579;ABP=182.214;AC=1;AF=0.0833333;AN=12;AO=29;CIGAR=1X;DP=729;DPB=729;DPRA=1.37459;EPP=65.983;EPPR=1520.87;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.958512;PAO=0;PQA=0;PQR=0;PRO=0;QA=1172;QR=27922;RO=699;RPL=29;RPP=65.983;RPPR=1520.87;RPR=0;RUN=1;SAF=0;SAP=65.983;SAR=29;SRF=0;SRP=1520.87;SRR=699;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:94:94,0:94:3765:0:0:0,-28.2968,-338.854 0/0:108:108,0:108:4312:0:0:0,-32.5112,-388.03 0/0:105:105,0:105:4195:0:0:0,-31.6081,-377.499 0/0:130:129,1:129:5197:1:41:0,-35.0393,-463.47 0/1:152:131,20:131:5169:20:807:-27.3746,0,-419.52 0/0:140:132,8:132:5284:8:324:0,-12.6154,-445.869 dDocent_Contig_80 38 . G A 1589.06 . AB=0.374194;ABP=24.3187;AC=2;AF=0.166667;AN=12;AO=58;CIGAR=1X;DP=493;DPB=493;DPRA=0.91716;EPP=128.956;EPPR=947.601;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.981609;PAO=0;PQA=0;PQR=0;PRO=0;QA=2287;QR=17254;RO=435;RPL=0;RPP=128.956;RPPR=947.601;RPR=58;RUN=1;SAF=58;SAP=128.956;SAR=0;SRF=435;SRP=947.601;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:90:90,0:90:3574:0:0:0,-27.0927,-321.686 0/0:107:107,0:107:4250:0:0:0,-32.2102,-382.452 0/0:56:56,0:56:2189:0:0:0,-16.8577,-197.187 0/0:85:85,0:85:3404:0:0:0,-25.5875,-306.404 0/1:79:47,32:47:1855:32:1259:-89.7881,0,-143.376 0/1:76:50,26:50:1982:26:1028:-69.9312,0,-155.695 dDocent_Contig_81 20 . T A 30.0426 . AB=0.09375;ABP=94.755;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X2M1X;DP=180;DPB=180;DPRA=2.14706;EPP=29.068;EPPR=367.818;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=478;QR=6658;RO=168;RPL=0;RPP=29.068;RPPR=367.818;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=168;SRP=367.818;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:38:35,3:35:1399:3:119:0,-0.344125,-115.072 0|1:51:46,5:46:1819:5:203:-3.30032,0,-148.576 0|0:22:22,0:22:877:0:0:0,-6.62266,-79.2356 0|0:44:41,3:41:1629:3:115:0,-2.52133,-136.124 0|0:12:12,0:12:455:0:0:0,-3.61236,-41.2855 0|1:13:12,1:12:479:1:41:-0.181177,0,-39.5487 dDocent_Contig_82 15 . T A 3174.71 . AB=0.128543;ABP=2455.1;AC=2;AF=0.166667;AN=12;AO=267;CIGAR=1X;DP=4936;DPB=4936;DPRA=1.29803;EPP=582.793;EPPR=10132.9;GTI=0;LEN=1;MEANALT=1.6;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999786;PAO=0;PQA=0;PQR=0;PRO=0;QA=10521;QR=183577;RO=4665;RPL=0;RPP=582.793;RPPR=10132.9;RPR=267;RUN=1;SAF=267;SAP=582.793;SAR=0;SRF=4665;SRP=10132.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:659:659,0:659:25819:0:0:0,-198.379,-2321.57 0/0:816:815,1:815:32096:1:38:0,-241.843,-2882.13 0/0:582:579,1:579:22778:1:41:0,-170.907,-2044.06 0/0:833:830,2:830:32632:2:59:0,-245.227,-2928.4 0/1:1013:838,174:838:33160:174:6864:-312.499,0,-2676.51 0/1:1033:944,89:944:37092:89:3519:-5.78537,0,-3024.06 dDocent_Contig_83 16 . T A 4955.54 . AB=0.520249;ABP=4.15354;AC=6;AF=0.5;AN=12;AO=167;CIGAR=1X;DP=321;DPB=321;DPRA=0;EPP=365.646;EPPR=337.417;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6605;QR=5974;RO=154;RPL=0;RPP=365.646;RPPR=337.417;RPR=167;RUN=1;SAF=167;SAP=365.646;SAR=0;SRF=154;SRP=337.417;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:20,11:20:774:11:423:-29.0897,0,-60.6529 0/1:52:24,28:24:929:28:1119:-85.3439,0,-68.2688 0/1:116:54,62:54:2124:62:2449:-185.645,0,-156.44 0/1:40:20,20:20:788:20:799:-60.1892,0,-59.2019 0/1:52:24,28:24:914:28:1104:-83.9987,0,-66.9171 0/1:30:12,18:12:445:18:711:-55.285,0,-31.3577 dDocent_Contig_84 15 . G T 1831.55 . AB=0.239554;ABP=214.526;AC=5;AF=0.416667;AN=12;AO=86;CIGAR=1X;DP=383;DPB=383;DPRA=2.99167;EPP=189.757;EPPR=572.133;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.939394;PAO=0;PQA=0;PQR=0;PRO=0;QA=3253;QR=11733;RO=297;RPL=0;RPP=189.757;RPPR=647.938;RPR=86;RUN=1;SAF=86;SAP=189.757;SAR=0;SRF=288;SRP=572.133;SRR=9;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:40:19,21:19:756:21:774:-57.934,0,-56.3223 0/0:24:24,0:24:943:0:0:0,-7.22472,-85.1743 0/1:95:86,9:86:3423:9:358:-3.98482,0,-279.513 0/1:78:67,11:67:2637:11:422:-14.8505,0,-213.978 0/1:69:52,17:52:2022:17:639:-37.0705,0,-161.404 0/1:77:49,28:49:1952:28:1060:-72.5161,0,-152.697 dDocent_Contig_85 56 . G A 5409.99 . AB=0.283355;ABP=323.85;AC=6;AF=0.5;AN=12;AO=223;CIGAR=1X;DP=787;DPB=787;DPRA=0;EPP=487.249;EPPR=1227.72;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996454;PAO=0;PQA=0;PQR=0;PRO=0;QA=8671;QR=22219;RO=564;RPL=223;RPP=487.249;RPPR=1227.72;RPR=0;RUN=1;SAF=223;SAP=487.249;SAR=0;SRF=564;SRP=1227.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:87:61,26:61:2356:26:980:-62.3032,0,-186.019 0/1:112:79,33:79:3121:33:1307:-84.1837,0,-247.262 0/1:111:79,32:79:3087:32:1218:-76.4752,0,-244.493 0/1:111:65,46:65:2576:46:1807:-129.437,0,-198.561 0/1:203:177,26:177:6950:26:1018:-30.8077,0,-564.104 0/1:163:103,60:103:4129:60:2341:-161.789,0,-322.518 dDocent_Contig_86 98 . N T 468.776 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=17;CIGAR=1X;DP=17;DPB=17;DPRA=0;EPP=39.9253;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=497;QR=0;RO=0;RPL=17;RPP=39.9253;RPPR=0;RPR=0;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:104:-9.70252,-0.90309,0 1/1:4:0,4:0:0:4:119:-11.0037,-1.20412,0 ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:144:-13.2433,-1.50515,0 1/1:2:0,2:0:0:2:54:-5.12867,-0.60206,0 1/1:3:0,3:0:0:3:76:-7.09234,-0.90309,0 dDocent_Contig_87 16 . G A 137.515 . AB=0.10582;ABP=258.084;AC=1;AF=0.0833333;AN=12;AO=57;CIGAR=1X;DP=1290;DPB=1290;DPRA=0.660072;EPP=126.784;EPPR=2680.44;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2254;QR=48384;RO=1233;RPL=0;RPP=126.784;RPPR=2680.44;RPR=57;RUN=1;SAF=57;SAP=126.784;SAR=0;SRF=1233;SRP=2680.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:176:162,14:162:6362:14:559:0,-2.32869,-521.709 0/1:189:169,20:169:6680:20:785:-14.0702,0,-544.03 0/0:116:108,8:108:4255:8:322:0,-5.57171,-353.587 0/0:253:238,15:238:9294:15:588:0,-22.9063,-782.692 0/0:287:287,0:287:11276:0:0:0,-86.3956,-1014.16 0/0:269:269,0:269:10517:0:0:0,-80.9771,-945.92 dDocent_Contig_88 9 . T A 76.2712 . AB=0.153846;ABP=43.6001;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=138;DPB=138;DPRA=1.225;EPP=24.725;EPPR=280.959;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.890625;PAO=0;PQA=0;PQR=0;PRO=0;QA=368;QR=4934;RO=128;RPL=0;RPP=24.725;RPPR=280.959;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=128;SRP=280.959;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:15,4:15:582:4:139:-7.12897,0,-47.0036 0/0:41:38,3:38:1451:3:117:0,-1.43185,-119.948 0/0:14:14,0:14:544:0:0:0,-4.21442,-49.3062 0/0:18:17,1:17:656:1:35:0,-1.91991,-55.878 0/0:26:26,0:26:1006:0:0:0,-7.82678,-90.8497 0/1:20:18,2:18:695:2:77:-1.28854,0,-56.8632 dDocent_Contig_89 22 . G A 1683.55 . AB=0.126685;ABP=1350.3;AC=2;AF=0.166667;AN=12;AO=193;CIGAR=1X;DP=3986;DPB=3986;DPRA=0.592055;EPP=422.104;EPPR=8232.89;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.999736;PAO=0;PQA=0;PQR=0;PRO=0;QA=7644;QR=149361;RO=3790;RPL=0;RPP=422.104;RPPR=8232.89;RPR=193;RUN=1;SAF=193;SAP=422.104;SAR=0;SRF=3790;SRP=8232.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:361:343,18:343:13541:18:716:0,-43.9054,-1152.93 0/1:704:634,70:634:25019:70:2786:-38.9288,0,-2037.67 0/1:409:337,71:337:13444:71:2815:-130.24,0,-1085.72 0/0:687:653,34:653:25612:34:1327:0,-87.1233,-2183.27 0/0:931:930,0:930:36629:0:0:0,-279.958,-3293.23 0/0:894:893,0:893:35116:0:0:0,-268.82,-3157.02 dDocent_Contig_90 21 . G A 446.028 . AB=0.264706;ABP=35.7101;AC=1;AF=0.0833333;AN=12;AO=24;CIGAR=1X;DP=391;DPB=391;DPRA=0.994898;EPP=55.1256;EPPR=799.941;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.833333;PAIREDR=0.735695;PAO=0;PQA=0;PQR=0;PRO=0;QA=963;QR=14560;RO=367;RPL=0;RPP=55.1256;RPPR=799.941;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=367;SRP=799.941;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:57:57,0:57:2287:0:0:0,-17.1587,-205.989 0/0:77:77,0:77:3047:0:0:0,-23.1793,-274.308 0/0:60:59,1:59:2357:1:41:0,-13.9672,-208.192 0/0:62:62,0:62:2428:0:0:0,-18.6639,-218.667 0/1:68:50,18:50:1961:18:723:-44.9214,0,-156.201 0/0:67:62,5:62:2480:5:199:0,-1.88116,-205.052 dDocent_Contig_91 98 . N G 96.1862 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.91202;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=103;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:103:-9.61002,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_92 98 . N T 184.78 . AB=0;ABP=0;AC=8;AF=0.8;AN=10;AO=6;CIGAR=1X;DP=9;DPB=9;DPRA=0.875;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=184;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,1:0:0:1:35:-3.2837,-0.30103,0 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 ./.:.:.:.:.:.:.:. 0/0:2:0,0:0:0:0:0:0,0,0 1/1:2:0,2:0:0:2:45:-4.27369,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_93 1 . N G 120.026 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=121;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:39:-3.89656,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_97 209 . N G 16196.6 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=474;CIGAR=1X;DP=474;DPB=474;DPRA=0;EPP=1032.29;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.196203;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=17980;QR=0;RO=0;RPL=474;RPP=1032.29;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=1032.29;SAR=474;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:78:0,78:0:0:78:2931:-263.916,-23.4803,0 1/1:133:0,133:0:0:133:4988:-448.868,-40.037,0 1/1:87:0,87:0:0:87:3348:-301.396,-26.1896,0 1/1:80:0,80:0:0:80:3037:-273.441,-24.0824,0 1/1:50:0,50:0:0:50:1871:-168.599,-15.0515,0 1/1:46:0,46:0:0:46:1805:-162.665,-13.8474,0 dDocent_Contig_99 116 . G A 1081.55 . AB=0.1875;ABP=464.448;AC=3;AF=0.25;AN=12;AO=146;CIGAR=1X;DP=1013;DPB=1013;DPRA=0;EPP=320.045;EPPR=1881.33;GTI=0;LEN=1;MEANALT=1.16667;MQM=36.4658;MQMR=38.4497;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.978035;PAO=0;PQA=0;PQR=0;PRO=0;QA=4758;QR=28690;RO=865;RPL=0;RPP=320.045;RPPR=1881.33;RPR=146;RUN=1;SAF=0;SAP=320.045;SAR=146;SRF=0;SRP=1881.33;SRR=865;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:145:118,27:118:3976:27:895:-30.6581,0,-271.728 0/0:173:153,18:153:5035:18:583:0,-2.34832,-373.176 0/0:122:112,10:112:3749:10:336:0,-6.95083,-270.441 0/1:220:166,54:166:5567:54:1719:-77.1662,0,-364.287 0/0:174:158,16:158:5199:16:511:0,-10.1597,-357.048 0/1:179:158,21:158:5164:21:714:-1.93528,0,-337.233 dDocent_Contig_104 100 . C T 13088.3 . AB=0.412839;ABP=122.249;AC=6;AF=0.5;AN=12;AO=746;CIGAR=1X;DP=1807;DPB=1807;DPRA=0;EPP=1036.98;EPPR=2261.55;GTI=0;LEN=1;MEANALT=1.16667;MQM=35.244;MQMR=42.2396;NS=6;NUMALT=1;ODDS=0;PAIRED=0.310992;PAIREDR=0.378302;PAO=0;PQA=0;PQR=0;PRO=0;QA=26912;QR=38671;RO=1060;RPL=746;RPP=1622.93;RPPR=2304.77;RPR=0;RUN=1;SAF=75;SAP=1036.98;SAR=671;SRF=5;SRP=2261.55;SRR=1055;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:275:163,111:163:5882:111:3964:-210.619,0,-350.24 0/1:390:229,161:229:8352:161:5853:-294.273,0,-566.332 0/1:202:129,73:129:4722:73:2676:-134.584,0,-279.445 0/1:358:223,135:223:8156:135:4881:-259.415,0,-491.357 0/1:277:146,131:146:5364:131:4673:-196.756,0,-333.597 0/1:305:170,135:170:6195:135:4865:-217.185,0,-369.721 dDocent_Contig_106 7 . T C 13309.4 . AB=0.0628608;ABP=2590.63;AC=2;AF=0.166667;AN=12;AO=130;CIGAR=1X2M1X7M1X3M1X1M;DP=2201;DPB=2201.47;DPRA=0;EPP=285.302;EPPR=29.068;GTI=0;LEN=1;MEANALT=35;MQM=33.2462;MQMR=34.1667;NS=6;NUMALT=8;ODDS=0;PAIRED=0.530769;PAIREDR=0;PAO=1.5;PQA=52;PQR=52;PRO=1.5;QA=3414;QR=458;RO=12;RPL=0;RPP=285.302;RPPR=29.068;RPR=130;RUN=1;SAF=130;SAP=285.302;SAR=0;SRF=12;SRP=29.068;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:312:5,134,40,25,3,6,1,2,39:5:200:134,40,25,3,6,1,2,39:2473,1577,647,116,186,17,81,683:-168.486,-36.9665,-7.89085,-123.902,-2.14574,-123.122,-121.765,0,-86.9367,-125.501,-166.849,-45.0876,-132.022,-129.885,-177.207,-155.685,-33.9217,-120.857,-118.721,-163.805,-165.14,-169.029,-47.2672,-134.201,-132.065,-177.149,-165.985,-179.989,-166.029,-44.2669,-131.202,-129.065,-174.149,-162.985,-176.329,-176.688,-130.678,-8.92399,-95.8513,-93.7132,-138.798,-127.633,-140.978,-137.978,-130.199 0|1:514:0,211,62,42,10,22,6,6,36:0:0:211,62,42,10,22,6,6,36:3670,2414,1127,397,541,186,233,662:-288.722,-83.3004,-19.783,-218.085,-12.6691,-199.421,-205.425,0,-134.786,-192.782,-270.269,-64.8466,-199.631,-186.971,-267.259,-250.582,-45.1596,-179.944,-167.284,-232.128,-243.959,-275.412,-69.9894,-204.774,-192.114,-256.958,-237.271,-273.606,-281.027,-75.6054,-210.389,-197.729,-262.574,-242.887,-267.717,-279.221,-249.622,-44.2035,-178.985,-166.324,-231.168,-211.481,-236.311,-241.927,-238.785 0|0:276:4,142,20,9,5,12,0,5,20:4:140:142,20,9,5,12,0,5,20:2468,796,190,195,281,0,198,320:-176.043,-35.684,0,-156.297,-21.801,-157.338,-164.356,-29.856,-150.469,-168.709,-169.865,-35.3646,-155.977,-164.037,-175.422,-158.304,-23.8032,-144.417,-152.476,-157.985,-161.754,-177.247,-42.7463,-163.359,-171.418,-176.927,-165.366,-184.309,-169.735,-35.2341,-155.847,-163.906,-169.415,-157.854,-176.796,-175.291,-159.628,-25.1331,-145.74,-153.799,-159.308,-147.747,-166.689,-159.177,-160.669 0|0:366:0,170,30,23,6,12,2,21,28:0:0:170,30,23,6,12,2,21,28:3041,1166,584,207,398,32,828,439:-222.815,-51.1751,0,-188.385,-16.7491,-179.354,-180.679,-9.03714,-146.25,-173.756,-213.797,-42.1578,-179.368,-171.662,-211.991,-191.933,-20.29,-157.504,-149.797,-182.916,-188.321,-221.069,-49.4296,-186.64,-178.934,-212.052,-190.188,-220.467,-192.802,-21.1628,-158.373,-150.666,-183.785,-161.92,-191.056,-186.48,-199.009,-27.3748,-164.58,-156.873,-189.991,-168.127,-197.263,-168.996,-190.58 0|0:330:3,145,32,16,17,30,22,3,5:3:118:145,32,16,17,30,22,3,5:2625,1261,372,675,1097,641,117,79:-220.981,-79.2809,-44.8423,-186.945,-53.5623,-186.522,-195.166,-61.7747,-169.437,-199.559,-195.941,-62.5511,-170.212,-178.433,-200.034,-133.402,0,-107.672,-115.893,-116.669,-133.582,-176.696,-43.3032,-150.967,-159.187,-159.963,-97.4229,-179.284,-216.606,-83.214,-190.877,-199.098,-199.873,-137.335,-180.628,-224.913,-217.556,-84.1654,-191.827,-200.048,-200.823,-138.285,-181.578,-221.488,-225.261 0|0:403:0,188,37,15,11,29,17,6,17:0:0:188,37,15,11,29,17,6,17:3460,1437,494,435,874,512,225,306:-256.297,-66.693,-10.0994,-214.167,-24.5691,-203.029,-218.119,-28.5115,-175.989,-213.604,-239.592,-49.9882,-197.462,-201.414,-236.28,-189.61,0,-147.479,-151.431,-172.904,-180.88,-219.928,-30.322,-177.798,-181.75,-203.223,-153.24,-214.811,-246.51,-56.9064,-204.381,-208.332,-229.805,-179.823,-210.142,-244.704,-238.426,-48.8253,-196.297,-200.248,-221.721,-171.739,-202.058,-228.64,-233.309 dDocent_Contig_107 57 . A G 11459 . AB=0.0673352;ABP=1137.95;AC=0;AF=0;AN=12;AO=52;CIGAR=11M1X3M;DP=926;DPB=874.667;DPRA=1.21374;EPP=115.927;EPPR=993.202;GTI=0;LEN=1;MEANALT=4.2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.991228;PAO=0;PQA=0;PQR=0;PRO=0;QA=1992;QR=17759;RO=456;RPL=52;RPP=115.927;RPPR=993.202;RPR=0;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=456;SRP=993.202;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:172:60,101,0,10:60:2322:101,0,10:3954,0,370:-307.043,0,-160.335,-325.105,-190.739,-515.832,-294.85,-160.484,-485.576,-482.566 0|0:196:72,108,0,11:72:2795:108,0,11:4201,0,445:-323.526,0,-197.127,-345.2,-229.638,-574.842,-308.508,-192.945,-538.151,-534.839 0|0:129:33,78,0,16:33:1292:78,0,16:3026,0,594:-238.408,0,-82.7683,-248.342,-106.249,-354.58,-199.759,-57.669,-305.996,-301.18 0|0:201:92,98,0,10:92:3591:98,0,10:3743,0,382:-279.331,0,-265.698,-307.026,-295.199,-602.221,-275.689,-263.863,-570.884,-567.874 0|0:131:118,8,3,0:118:4599:8,3,0:270,110,0:0,-13.6264,-389.313,-26.518,-382.733,-403.691,-35.5215,-391.721,-404.595,-413.583 0|0:97:81,0,5,5:81:3160:0,5,5:0,190,201:0,-24.3834,-284.147,-8.79961,-268.566,-267.061,-7.80678,-267.582,-252.001,-266.077 dDocent_Contig_108 12 . G T 285.796 . AB=0.0666667;ABP=198.732;AC=0;AF=0;AN=12;AO=12;CIGAR=6M1X;DP=1137;DPB=1142.71;DPRA=1.05645;EPP=29.068;EPPR=2346.03;GTI=0;LEN=1;MEANALT=4.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.833333;PAIREDR=0.980538;PAO=0;PQA=0;PQR=0;PRO=0;QA=485;QR=41574;RO=1079;RPL=0;RPP=29.068;RPPR=2346.03;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=1079;SRP=2346.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:169:165,4,0:165:6319:4,0:152,0:0,-36.8249,-554.59,-49.6699,-555.795,-568.26 0|0:273:249,15,4:249:9596:15,4:568,164:0,-28.3637,-811.866,-61.4109,-802.844,-848.207 0|0:120:93,18,8:93:3561:18,8:693,321:-28.8984,0,-286.804,-30.4409,-265.773,-320.267 0|0:182:180,2,0:180:6908:2,0:78,0:0,-47.384,-614.188,-54.1854,-614.79,-621.202 0|0:180:180,0,0:180:6967:0,0:0,0:0,-54.1854,-626.888,-54.1854,-626.888,-626.888 0|0:213:212,0,0:212:8223:0,0:0,0:0,-63.8184,-739.712,-63.8184,-739.712,-739.712 dDocent_Contig_109 11 . C T 4310.34 . AB=0.258893;ABP=258.506;AC=1;AF=0.0833333;AN=12;AO=131;CIGAR=1X1M;DP=826;DPB=826;DPRA=0.790625;EPP=287.473;EPPR=1188.63;GTI=0;LEN=1;MEANALT=2.75;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.965201;PAO=0;PQA=0;PQR=0;PRO=0;QA=5242;QR=21449;RO=546;RPL=0;RPP=287.473;RPPR=1188.63;RPR=131;RUN=1;SAF=131;SAP=287.473;SAR=0;SRF=546;SRP=1188.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:115:56,6,27,26:56:2192:6,27,26:244,1083,1027:-72.371,-69.1013,-247.513,0,-160.09,-172.09,-4.73177,-164.819,-95.7171,-177.12 0|1:174:67,10,31,66:67:2601:10,31,66:400,1254,2642:-197.466,-184.687,-395.361,-114.242,-294.978,-318.595,0,-180.731,-110.285,-193.812 0|0:87:54,6,23,4:54:2110:6,23,4:245,912,164:-58.8001,-54.8385,-226.467,0,-153.207,-166.501,-61.5181,-214.736,-159.887,-233.748 0|0:130:58,0,37,35:58:2259:0,37,35:0,1484,1409:-104.803,-122.262,-307.901,0,-185.636,-174.498,-6.14117,-191.778,-69.5104,-181.242 0|0:136:128,0,8,0:128:5070:0,8,0:0,324,0:0,-38.5318,-455.804,-11.4113,-429.087,-426.679,-38.5318,-455.804,-429.087,-455.804 0|0:184:183,0,0,0:183:7217:0,0,0:0,0,0:0,-55.0885,-648.823,-55.0885,-648.823,-648.823,-55.0885,-648.823,-648.823,-648.823 dDocent_Contig_110 16 . T G 1204.85 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=22;CIGAR=1M1X12M;DP=1797;DPB=1828.71;DPRA=1.22862;EPP=50.7827;EPPR=3486.05;GTI=0;LEN=1;MEANALT=6;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.99813;PAO=0;PQA=0;PQR=0;PRO=0;QA=879;QR=63110;RO=1604;RPL=0;RPP=50.7827;RPPR=3486.05;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=1604;SRP=3486.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:256:214,38,0:214:8388:38,0:1428,0:-52.7086,0,-678.499,-117.129,-689.938,-806.906 0|0:358:350,3,0:350:13777:3,0:119,0:0,-95.5346,-1228.04,-105.36,-1228.94,-1238.74 0|0:196:162,28,0:162:6384:28,0:1086,0:-40.4807,0,-516.81,-89.2475,-525.239,-614.459 0|0:285:267,14,0:267:10529:14,0:548,0:0,-35.268,-897.397,-80.375,-901.612,-946.667 0|0:395:339,29,22:339:13317:29,22:1114,879:0,-10.618,-1097.18,-29.6385,-1033.51,-1118.32 0|0:307:272,35,0:272:10715:35,0:1345,0:-28.9048,0,-871.358,-110.785,-881.894,-992.294 dDocent_Contig_111 12 . C T 58.4917 . AB=0.103896;ABP=107.946;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=475;DPB=475;DPRA=0.96281;EPP=26.8965;EPPR=1010.57;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.75431;PAO=0;PQA=0;PQR=0;PRO=0;QA=440;QR=18546;RO=464;RPL=0;RPP=26.8965;RPPR=1010.57;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=464;SRP=1010.57;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:59,0:59:2350:0:0:0,-17.7608,-211.649 0/0:120:120,0:120:4848:0:0:0,-36.1236,-436.197 0/0:63:63,0:63:2500:0:0:0,-18.9649,-225.138 0/0:80:79,1:79:3145:1:37:0,-20.3846,-279.421 0/0:76:74,2:74:2966:2:81:0,-15.1925,-259.338 0/1:77:69,8:69:2737:8:322:-6.16793,0,-223.262 dDocent_Contig_112 11 . C T 662.083 . AB=0.468085;ABP=3.42611;AC=1;AF=0.0833333;AN=12;AO=22;CIGAR=1X;DP=152;DPB=152;DPRA=2.2381;EPP=50.7827;EPPR=285.302;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992308;PAO=0;PQA=0;PQR=0;PRO=0;QA=893;QR=5193;RO=130;RPL=0;RPP=50.7827;RPPR=285.302;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=130;SRP=285.302;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1416:0:0:0,-10.536,-127.688 0/0:27:27,0:27:1028:0:0:0,-8.12781,-92.7995 0/0:10:10,0:10:405:0:0:0,-3.0103,-36.8098 0/0:14:14,0:14:565:0:0:0,-4.21442,-51.1914 0/0:19:19,0:19:770:0:0:0,-5.71957,-69.6195 0/1:47:25,22:25:1009:22:893:-66.5271,0,-76.9553 dDocent_Contig_113 107 . N A 68.9365 . AB=0;ABP=0;AC=2;AF=0.333333;AN=6;AO=2;CIGAR=1X;DP=5;DPB=5;DPRA=3;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=48;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=69;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 0/0:1:0,0:0:0:0:0:0,0,0 1/1:3:0,2:0:0:2:69:-6.16448,-0.60206,0 ./.:.:.:.:.:.:.:. 0/0:1:0,0:0:0:0:0:0,0,0 dDocent_Contig_115 83 . A C 112.711 . AB=0.179487;ABP=37.8095;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=187;DPB=187;DPRA=1.31757;EPP=18.2106;EPPR=393.875;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=252;QR=6390;RO=180;RPL=7;RPP=18.2106;RPPR=393.875;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=180;SRP=393.875;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:39:32,7:32:1086:7:252:-11.2888,0,-86.2995 0/0:37:37,0:37:1311:0:0:0,-11.1381,-118.293 0/0:37:37,0:37:1338:0:0:0,-11.1381,-120.717 0/0:20:20,0:20:733:0:0:0,-6.0206,-66.2998 0/0:17:17,0:17:608:0:0:0,-5.11751,-55.049 0/0:37:37,0:37:1314:0:0:0,-11.1381,-118.554 dDocent_Contig_116 107 . N T 3810.12 . AB=0.8;ABP=26.4622;AC=12;AF=1;AN=12;AO=122;CIGAR=1X2M;DP=128;DPB=128;DPRA=0;EPP=267.93;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=0;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4109;QR=0;RO=0;RPL=0;RPP=267.93;RPPR=0;RPR=122;RUN=1;SAF=0;SAP=267.93;SAR=122;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:30:0,6,24:0:0:6,24:204,808:-82.3556,-65.8073,-64.0011,-16.8875,0,-9.66278 1|1:31:0,0,31:0:0:0,31:0,1059:-95.6185,-95.6185,-95.6185,-9.33193,-9.33193,0 1|1:22:0,0,22:0:0:0,22:0,740:-66.9146,-66.9146,-66.9146,-6.62266,-6.62266,0 1|1:30:0,0,30:0:0:0,30:0,998:-90.1241,-90.1241,-90.1241,-9.0309,-9.0309,0 1|1:10:0,0,10:0:0:0,10:0,337:-30.6569,-30.6569,-30.6569,-3.0103,-3.0103,0 1|1:5:0,0,5:0:0:0,5:0,167:-15.3593,-15.3593,-15.3593,-1.50515,-1.50515,0 dDocent_Contig_117 28 . T A 1785.43 . AB=0.246667;ABP=170.243;AC=1;AF=0.0833333;AN=12;AO=122;CIGAR=1X;DP=1969;DPB=1969;DPRA=1.1381;EPP=267.93;EPPR=4011.55;GTI=0;LEN=1;MEANALT=1.25;MQM=59.9836;MQMR=59.9989;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.971831;PAO=0;PQA=0;PQR=0;PRO=0;QA=4879;QR=73986;RO=1846;RPL=0;RPP=267.93;RPPR=4011.55;RPR=122;RUN=1;SAF=122;SAP=267.93;SAR=0;SRF=1846;SRP=4011.55;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:246:246,0:246:9835:0:0:0,-74.0534,-884.508 0/0:355:355,0:355:14227:0:0:0,-106.866,-1279.33 0/0:312:299,13:299:12029:13:513:0,-47.4094,-1035.2 0/0:341:327,14:327:13096:14:559:0,-52.0008,-1126.99 0/1:300:225,74:225:9003:74:2991:-178.861,0,-719.309 0/0:415:394,21:394:15796:21:816:0,-51.1834,-1346.6 dDocent_Contig_118 99 . N A 95.5058 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=37.2;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0.4;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=119;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:6:-0.59999,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-2.63623,-0.30103,0 1/1:3:0,3:0:0:3:78:-5.66761,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_121 14 . C A 83.9943 . AB=0.0922509;ABP=394.364;AC=1;AF=0.0833333;AN=12;AO=39;CIGAR=1X;DP=1747;DPB=1747;DPRA=0.861589;EPP=87.6977;EPPR=3711.89;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9824;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999415;PAO=0;PQA=0;PQR=0;PRO=0;QA=1565;QR=68229;RO=1708;RPL=0;RPP=87.6977;RPPR=3711.89;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=1708;SRP=3711.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:273:273,0:273:10888:0:0:0,-82.1812,-978.906 0/0:367:367,0:367:14644:0:0:0,-110.478,-1316.85 0/0:240:240,0:240:9635:0:0:0,-72.2472,-866.515 0/0:341:341,0:341:13625:0:0:0,-102.651,-1225.22 0/1:271:246,25:246:9807:25:1000:-8.71819,0,-800.418 0/0:255:241,14:241:9630:14:565:0,-25.5701,-814.897 dDocent_Contig_122 28 . C T 138.236 . AB=0.135135;ABP=88.5781;AC=3;AF=0.25;AN=12;AO=10;CIGAR=1X;DP=149;DPB=149;DPRA=0.986667;EPP=24.725;EPPR=304.845;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.877698;PAO=0;PQA=0;PQR=0;PRO=0;QA=406;QR=5540;RO=139;RPL=0;RPP=24.725;RPPR=304.845;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=139;SRP=304.845;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1081:0:0:0,-8.12781,-97.5758 0/1:25:21,4:21:837:4:164:-7.62415,0,-68.1151 0/0:22:22,0:22:892:0:0:0,-6.62266,-80.5855 0/1:25:22,3:22:876:3:119:-3.56875,0,-71.6197 0/0:26:26,0:26:1039:0:0:0,-7.82678,-93.7982 0/1:24:21,3:21:815:3:123:-4.24007,0,-66.4277 dDocent_Contig_123 11 . A T 522.851 . AB=0.164773;ABP=174.803;AC=4;AF=0.333333;AN=12;AO=31;CIGAR=1X;DP=254;DPB=254;DPRA=1.25143;EPP=70.3259;EPPR=485.077;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1253;QR=8899;RO=222;RPL=0;RPP=70.3259;RPPR=485.077;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=222;SRP=485.077;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1404:0:0:0,-10.536,-126.618 0/1:44:36,8:36:1426:8:326:-16.4645,0,-115.348 0/1:69:53,15:53:2137:15:608:-34.4595,0,-171.92 0/1:35:32,3:32:1275:3:117:-0.37253,0,-104.481 0/1:28:25,3:25:1008:3:122:-2.94365,0,-82.5853 0/0:43:41,2:41:1649:2:80:0,-5.35271,-141.045 dDocent_Contig_124 21 . C A 911.45 . AB=0.219251;ABP=131.034;AC=4;AF=0.333333;AN=12;AO=42;CIGAR=1X;DP=265;DPB=265;DPRA=1.03256;EPP=94.2121;EPPR=487.249;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9686;NS=6;NUMALT=1;ODDS=0;PAIRED=0.97619;PAIREDR=0.762332;PAO=0;PQA=0;PQR=0;PRO=0;QA=1690;QR=8914;RO=223;RPL=0;RPP=94.2121;RPPR=487.249;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=223;SRP=487.249;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:20,17:20:758:17:684:-50.7514,0,-57.3875 0/1:74:60,14:60:2438:14:562:-28.6447,0,-197.276 0/1:27:23,4:23:883:4:161:-6.74746,0,-71.6373 0/1:49:43,6:43:1726:6:242:-7.40685,0,-140.804 0/0:35:34,1:34:1382:1:41:0,-6.44148,-120.536 0/0:43:43,0:43:1727:0:0:0,-12.9443,-155.626 dDocent_Contig_125 17 . T C 143.062 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=5;CIGAR=1X3M1X;DP=408;DPB=408;DPRA=0.894495;EPP=13.8677;EPPR=810.798;GTI=0;LEN=1;MEANALT=4.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.989247;PAO=0;PQA=0;PQR=0;PRO=0;QA=198;QR=14612;RO=372;RPL=0;RPP=13.8677;RPPR=810.798;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=372;SRP=810.798;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:55:50,3,1:50:1964:3,1:119,41:0,-5.17054,-165.937,-11.65,-163.455,-172.951 0|0:60:49,0,9:49:1921:0,9:0,357:-14.6249,-29.3754,-187.343,0,-157.961,-155.251 0|0:80:77,0,3:77:3068:0,3:0,111:0,-23.1793,-275.849,-13.7295,-266.77,-265.867 0|0:75:62,2,4:62:2431:2,4:79,163:0,-12.1556,-211.5,-5.19309,-198.654,-203.951 0|0:71:71,0,0:71:2760:0,0:0,0:0,-21.3731,-248.54,-21.3731,-248.54,-248.54 0|0:67:63,0,4:63:2468:0,4:0,161:0,-18.9649,-221.895,-5.29411,-208.626,-207.421 dDocent_Contig_126 26 . G C 3048.44 . AB=0.537234;ABP=5.27418;AC=3;AF=0.25;AN=12;AO=101;CIGAR=1X;DP=783;DPB=783;DPRA=0.315966;EPP=222.329;EPPR=1483.95;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4025;QR=26544;RO=682;RPL=0;RPP=222.329;RPPR=1483.95;RPR=101;RUN=1;SAF=101;SAP=222.329;SAR=0;SRF=682;SRP=1483.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:73:24,49:24:937:49:1950:-153.732,0,-62.659 0/1:50:31,19:31:1221:19:758:-53.4907,0,-95.1217 0/0:48:48,0:48:1854:0:0:0,-14.4494,-167.073 0/1:65:32,33:32:1228:33:1317:-99.2306,0,-91.2243 0/0:345:345,0:345:13400:0:0:0,-103.855,-1205.16 0/0:202:202,0:202:7904:0:0:0,-60.8081,-711.009 dDocent_Contig_142 98 . N A 7936.01 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=260;CIGAR=1X;DP=261;DPB=261;DPRA=0;EPP=567.593;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.6308;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.976923;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=8797;QR=0;RO=0;RPL=260;RPP=567.593;RPPR=0;RPR=0;RUN=1;SAF=260;SAP=567.593;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:37:0,37:0:0:37:1261:-113.721,-11.1381,0 1/1:61:0,61:0:0:61:2040:-183.799,-18.3628,0 1/1:43:0,43:0:0:43:1460:-131.694,-12.9443,0 1/1:52:0,51:0:0:51:1734:-155.962,-15.3525,0 1/1:31:0,31:0:0:31:1063:-95.8389,-9.33193,0 1/1:37:0,37:0:0:37:1239:-111.808,-11.1381,0 dDocent_Contig_145 55 . T C 3519.42 . AB=0.173636;ABP=1020.69;AC=6;AF=0.5;AN=12;AO=191;CIGAR=1X;DP=1100;DPB=1100;DPRA=0;EPP=417.762;EPPR=1957.37;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.963351;PAIREDR=0.98348;PAO=0;PQA=0;PQR=0;PRO=0;QA=7614;QR=36148;RO=908;RPL=191;RPP=417.762;RPPR=1974.71;RPR=0;RUN=1;SAF=191;SAP=417.762;SAR=0;SRF=906;SRP=1957.37;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:144:116,27:116:4600:27:1057:-52.275,0,-370.774 0/1:151:131,20:131:5172:20:802:-27.0412,0,-419.885 0/1:100:71,29:71:2843:29:1160:-74.5748,0,-225.868 0/1:155:126,29:126:5013:29:1178:-59.6347,0,-404.398 0/1:229:206,23:206:8220:23:903:-12.6419,0,-670.398 0/1:321:258,63:258:10300:63:2514:-129.772,0,-829.702 dDocent_Contig_146 46 . C A 912.709 . AB=0.21466;ABP=138.085;AC=1;AF=0.0833333;AN=12;AO=71;CIGAR=1X;DP=985;DPB=985;DPRA=1.65849;EPP=157.185;EPPR=1987.74;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.985915;PAIREDR=0.974836;PAO=0;PQA=0;PQR=0;PRO=0;QA=2835;QR=36800;RO=914;RPL=0;RPP=157.185;RPPR=1987.74;RPR=71;RUN=1;SAF=71;SAP=157.185;SAR=0;SRF=914;SRP=1987.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:168:159,9:159:6398:9:353:0,-18.4467,-543.396 0/0:182:167,15:167:6688:15:583:0,-1.99229,-548.802 0/0:106:106,0:106:4255:0:0:0,-31.9092,-382.895 0/0:172:168,4:168:6812:4:163:0,-36.7187,-597.665 0/0:166:164,2:164:6585:2:82:0,-42.1913,-584.569 0/1:191:150,41:150:6062:41:1654:-91.5896,0,-487.818 dDocent_Contig_147 14 . T C 21092.7 . AB=0.598074;ABP=98.4182;AC=6;AF=0.5;AN=12;AO=683;CIGAR=1X;DP=1142;DPB=1142;DPRA=0;EPP=1486.13;EPPR=999.716;GTI=0;LEN=1;MEANALT=1;MQM=59.7423;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.979502;PAIREDR=0.636166;PAO=0;PQA=0;PQR=0;PRO=0;QA=27351;QR=18426;RO=459;RPL=0;RPP=1486.13;RPPR=999.716;RPR=683;RUN=1;SAF=683;SAP=1486.13;SAR=0;SRF=459;SRP=999.716;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:155:75,80:75:3000:80:3165:-238.226,0,-223.419 0/1:244:100,144:100:4001:144:5754:-444.18,0,-286.613 0/1:143:67,76:67:2715:76:3087:-234.834,0,-201.406 0/1:186:47,139:47:1895:139:5583:-442.398,0,-114.756 0/1:188:67,121:67:2691:121:4837:-378.562,0,-185.712 0/1:226:103,123:103:4124:123:4925:-375.068,0,-303.083 dDocent_Contig_148 7 . T C 2746.07 . AB=0.195122;ABP=267.824;AC=6;AF=0.5;AN=12;AO=64;CIGAR=1X3M;DP=471;DPB=471;DPRA=0;EPP=141.985;EPPR=669.652;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2415;QR=11659;RO=307;RPL=0;RPP=141.985;RPPR=669.652;RPR=64;RUN=1;SAF=64;SAP=141.985;SAR=0;SRF=307;SRP=669.652;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:92:64,21,7:64:2450:21,7:793,268:-45.7227,0,-194.736,-42.9932,-179.063,-241.947 0|1:136:85,17,33:85:3209:17,33:662,1242:-76.1656,-47.3912,-305.285,0,-208.642,-253.067 0|1:55:29,12,14:29:1084:12,14:459,523:-34.0861,-5.16942,-90.3157,0,-51.1074,-84.538 0|1:45:28,6,10:28:1065:6,10:230,382:-22.9273,-12.4866,-98.0342,0,-68.4955,-84.3505 0|1:90:70,20,0:70:2680:20,0:769,0:-42.4433,0,-214.299,-63.5154,-220.32,-283.451 0|1:53:31,22,0:31:1171:22,0:810,0:-57.259,0,-89.7318,-66.5909,-96.3545,-162.574 dDocent_Contig_149 10 . G T 9252.67 . AB=0.204321;ABP=1619.71;AC=6;AF=0.5;AN=12;AO=435;CIGAR=1X;DP=2129;DPB=2129;DPRA=0;EPP=947.601;EPPR=3679.31;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996456;PAO=0;PQA=0;PQR=0;PRO=0;QA=17441;QR=67252;RO=1693;RPL=0;RPP=947.601;RPPR=3679.31;RPR=435;RUN=1;SAF=435;SAP=947.601;SAR=0;SRF=1693;SRP=3679.31;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:220:173,47:173:6846:47:1887:-103.805,0,-549.611 0/1:396:316,80:316:12594:80:3188:-167.777,0,-1013.33 0/1:195:155,40:155:6176:40:1591:-84.7224,0,-496.897 0/1:296:217,78:217:8561:78:3116:-191.333,0,-680.828 0/1:534:468,66:468:18554:66:2670:-79.6591,0,-1507.6 0/1:488:364,124:364:14521:124:4989:-301.968,0,-1158.87 dDocent_Contig_150 7 . T A 90.868 . AB=0.104895;ABP=196.909;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=704;DPB=704;DPRA=0.983051;EPP=46.4397;EPPR=1486.13;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=58.4422;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=773;QR=26131;RO=683;RPL=0;RPP=46.4397;RPPR=1486.13;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=683;SRP=1486.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:139:138,0:138:5250:0:0:0,-41.5421,-468.448 0/1:143:128,15:128:4861:15:579:-9.40556,0,-387.711 0/0:105:105,0:105:4045:0:0:0,-31.6081,-358.703 0/0:89:84,5:84:3241:5:194:0,-8.95882,-273.157 0/0:118:118,0:118:4533:0:0:0,-35.5215,-408.022 0/0:110:110,0:110:4201:0:0:0,-33.1133,-378.169 dDocent_Contig_151 10 . C T 81911.1 . AB=0.761826;ABP=1438.02;AC=7;AF=0.583333;AN=12;AO=2488;CIGAR=1X;DP=3080;DPB=3080;DPRA=0;EPP=5405.63;EPPR=1288.52;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999598;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=99942;QR=23799;RO=592;RPL=0;RPP=5405.63;RPPR=1288.52;RPR=2488;RUN=1;SAF=2488;SAP=5405.63;SAR=0;SRF=592;SRP=1288.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:424:92,332:92:3720:332:13357:-1073.46,0,-207.154 0/1:490:89,401:89:3562:401:16051:-1295.79,0,-173.103 0/1:409:164,245:164:6610:245:9875:-764.943,0,-471.456 0/1:528:172,356:172:6901:356:14271:-1124.33,0,-461.797 1/1:670:18,652:18:737:652:26224:-2291.09,-135.038,0 0/1:559:57,502:57:2269:502:20164:-1644.71,0,-36.0927 dDocent_Contig_152 29 . T C 1781.16 . AB=0.164818;ABP=618.762;AC=3;AF=0.25;AN=12;AO=107;CIGAR=1X;DP=1288;DPB=1288;DPRA=0.827835;EPP=235.358;EPPR=2563.18;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995759;PAO=0;PQA=0;PQR=0;PRO=0;QA=4181;QR=43514;RO=1179;RPL=0;RPP=235.358;RPPR=2563.18;RPR=107;RUN=1;SAF=107;SAP=235.358;SAR=0;SRF=1179;SRP=2563.18;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:172:169,3:169:6239:3:86:0,-43.7568,-553.461 0/1:302:245,55:245:9058:55:2160:-104.014,0,-724.438 0/1:110:91,19:91:3392:19:760:-35.6082,0,-272.317 0/1:219:189,30:189:7006:30:1175:-40.1034,0,-564.51 0/0:259:259,0:259:9492:0:0:0,-77.9668,-854.045 0/0:226:226,0:226:8327:0:0:0,-68.0328,-749.276 dDocent_Contig_153 1 . N G 253.552 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=270;QR=0;RO=0;RPL=0;RPP=18.2106;RPPR=0;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:156:-14.4157,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:114:-10.632,-0.90309,0 ./.:.:.:.:.:.:.:. dDocent_Contig_154 1 . N G 149.711 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=4.60517;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=162;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:162:-14.9667,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_155 47 . C T 761.959 . AB=0.139175;ABP=441.782;AC=2;AF=0.166667;AN=12;AO=54;CIGAR=1X;DP=976;DPB=976;DPRA=1.31973;EPP=120.27;EPPR=1996.43;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9957;NS=6;NUMALT=1;ODDS=0;PAIRED=0.981481;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2147;QR=36458;RO=922;RPL=0;RPP=120.27;RPPR=1996.43;RPR=54;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=922;SRP=2005.11;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:123:123,0:123:4895:0:0:0,-37.0267,-440.452 0/0:187:187,0:187:7351:0:0:0,-56.2926,-661.258 0/0:110:110,0:110:4338:0:0:0,-33.1133,-390.367 0/0:168:168,0:168:6634:0:0:0,-50.573,-596.767 0/1:145:127,18:127:5077:18:710:-20.5735,0,-413.158 0/1:243:207,36:207:8163:36:1437:-56.4361,0,-661.09 dDocent_Contig_156 69 . T C 92.5837 . AB=0.0994264;ABP=1460.85;AC=1;AF=0.0833333;AN=12;AO=303;CIGAR=1X;DP=5151;DPB=5151;DPRA=0;EPP=660.966;EPPR=10519.5;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999794;PAO=0;PQA=0;PQR=0;PRO=0;QA=10461;QR=165869;RO=4843;RPL=303;RPP=660.966;RPPR=10519.5;RPR=0;RUN=1;SAF=303;SAP=660.966;SAR=0;SRF=4843;SRP=10519.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:726:707,19:707:24276:19:658:0,-159.004,-2124.85 0/0:976:917,58:917:31275:58:2013:0,-112.13,-2632.64 0/0:553:532,20:532:18212:20:670:0,-105.742,-1578.22 0/0:872:849,23:849:28979:23:785:0,-191.532,-2536.54 0/1:1046:941,104:941:32343:104:3600:-9.57713,0,-2595.51 0/0:978:897,79:897:30784:79:2735:0,-47.7031,-2523.49 dDocent_Contig_157 23 . G A 48.312 . AB=0.125;ABP=42.0968;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=2X;DP=247;DPB=247;DPRA=0.744186;EPP=11.6962;EPPR=530.678;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=160;QR=9539;RO=243;RPL=0;RPP=11.6962;RPPR=530.678;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=243;SRP=530.678;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:45:45,0:45:1723:0:0:0,-13.5463,-155.303 0|0:23:23,0:23:909:0:0:0,-6.92369,-82.118 0|0:90:90,0:90:3557:0:0:0,-27.0927,-320.176 0|0:31:31,0:31:1225:0:0:0,-9.33193,-110.528 0|1:32:28,4:28:1096:4:160:-5.14996,0,-89.2928 0|0:26:26,0:26:1029:0:0:0,-7.82678,-92.9074 dDocent_Contig_158 15 . G T 69.6182 . AB=0.125;ABP=61.6401;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1M2I4M1X11M;DP=250;DPB=250.706;DPRA=1.18812;EPP=16.0391;EPPR=524.164;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.604167;PAO=0;PQA=0;PQR=0;PRO=0;QA=234;QR=9223;RO=240;RPL=0;RPP=16.0391;RPPR=524.164;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=240;SRP=524.164;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:48:42,6:42:1625:6:234:-6.97955,0,-132.062 0|0:49:48,0:48:1843:0:0:0,-14.4494,-166.024 0|0:27:27,0:27:1042:0:0:0,-8.12781,-94.0836 0|0:39:38,0:38:1460:0:0:0,-11.4391,-131.278 0|0:26:26,0:26:1001:0:0:0,-7.82678,-90.3978 0|0:61:59,0:59:2252:0:0:0,-17.7608,-202.806 dDocent_Contig_159 146 . T G 135.814 . AB=0.166667;ABP=49.335;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=227;DPB=227;DPRA=1.27;EPP=26.8965;EPPR=472.048;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.818182;PAIREDR=0.856481;PAO=0;PQA=0;PQR=0;PRO=0;QA=417;QR=8587;RO=216;RPL=0;RPP=26.8965;RPPR=472.048;RPR=11;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=472.048;SRR=216;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:1047:0:0:0,-7.82678,-94.5207 0/0:51:50,1:50:1992:1:36:0,-11.7543,-175.871 0/0:37:37,0:37:1451:0:0:0,-11.1381,-130.823 0/0:28:26,2:26:1022:2:70:0,-1.78433,-85.62 0/0:37:37,0:37:1477:0:0:0,-11.1381,-133.173 0/1:48:40,8:40:1598:8:311:-13.8999,0,-129.604 dDocent_Contig_160 107 . N T 381.188 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=13;CIGAR=1X;DP=13;DPB=13;DPRA=0;EPP=31.2394;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=396;QR=0;RO=0;RPL=0;RPP=31.2394;RPPR=0;RPR=13;RUN=1;SAF=0;SAP=31.2394;SAR=13;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:71:-6.74206,-0.60206,0 1/1:2:0,2:0:0:2:52:-4.93835,-0.60206,0 1/1:2:0,2:0:0:2:70:-6.64733,-0.60206,0 1/1:1:0,1:0:0:1:14:-1.39999,-0.30103,0 1/1:2:0,2:0:0:2:47:-4.46336,-0.60206,0 1/1:4:0,4:0:0:4:142:-13.1291,-1.20412,0 dDocent_Contig_166 104 . N A 1397.23 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=49;CIGAR=4X3M1X;DP=53;DPB=63;DPRA=0;EPP=109.412;EPPR=0;GTI=0;LEN=1;MEANALT=1.66667;MQM=56.8163;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.877551;PAIREDR=0;PAO=15;PQA=456;PQR=0;PRO=0;QA=1556;QR=0;RO=0;RPL=0;RPP=109.412;RPPR=0;RPR=49;RUN=1;SAF=0;SAP=109.412;SAR=49;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:23:0,22:0:0:22:719:-63.4161,-6.62266,0 1|1:8:0,7:0:0:7:228:-20.5009,-2.10721,0 1|1:1:0,1:0:0:1:30:-2.7177,-0.30103,0 1|1:10:0,8:0:0:8:237:-21.3429,-2.40824,0 1|1:6:0,6:0:0:6:192:-17.4212,-1.80618,0 1|1:5:0,5:0:0:5:150:-13.4736,-1.50515,0 dDocent_Contig_167 11 . T C 38691.2 . AB=0.492407;ABP=4.32934;AC=6;AF=0.5;AN=12;AO=1297;CIGAR=1X;DP=2634;DPB=2634;DPRA=0;EPP=2819.41;EPPR=2901.93;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999229;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=51882;QR=52448;RO=1335;RPL=0;RPP=2819.41;RPPR=2901.93;RPR=1297;RUN=1;SAF=1297;SAP=2819.41;SAR=0;SRF=1335;SRP=2901.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:370:271,99:271:10694:99:3992:-247.864,0,-850.439 0/1:416:275,140:275:10771:140:5623:-380.543,0,-843.443 0/1:245:138,107:138:5375:107:4299:-313.094,0,-409.891 0/1:470:297,172:297:11653:172:6882:-477.464,0,-906.487 0/1:573:193,380:193:7570:380:15169:-1191.5,0,-508.488 0/1:560:161,399:161:6385:399:15917:-1262.65,0,-405.845 dDocent_Contig_168 107 . N A 98.8388 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=99;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_169 8 . T C 2085.98 . AB=0.149284;ABP=1047.88;AC=4;AF=0.333333;AN=12;AO=171;CIGAR=1X;DP=1621;DPB=1621;DPRA=0;EPP=374.332;EPPR=3151.65;GTI=0;LEN=1;MEANALT=1;MQM=59.9181;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.988304;PAIREDR=0.996552;PAO=0;PQA=0;PQR=0;PRO=0;QA=6553;QR=55660;RO=1450;RPL=0;RPP=374.332;RPPR=3151.65;RPR=171;RUN=1;SAF=171;SAP=374.332;SAR=0;SRF=1450;SRP=3151.65;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:218:178,40:178:6824:40:1537:-72.9728,0,-548.415 0/0:323:307,16:307:11768:16:607:0,-42.2671,-1003.68 0/1:182:153,29:153:5897:29:1109:-45.2574,0,-475.89 0/1:297:262,35:262:10034:35:1342:-31.6574,0,-813.302 0/0:320:311,9:311:11957:9:342:0,-65.195,-1044.5 0/1:281:239,42:239:9180:42:1616:-61.1157,0,-741.318 dDocent_Contig_170 27 . A G 181.503 . AB=0.195652;ABP=40.0197;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=187;DPB=187;DPRA=0.669643;EPP=24.725;EPPR=387.361;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.7;PAIREDR=0.59887;PAO=0;PQA=0;PQR=0;PRO=0;QA=396;QR=7061;RO=177;RPL=0;RPP=24.725;RPPR=387.361;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=177;SRP=387.361;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:18,2:18:718:2:78:-1.3827,0,-58.9234 0/0:29:28,1:28:1115:1:40:0,-4.73419,-96.637 0/1:26:19,7:19:765:7:278:-17.5628,0,-61.344 0/0:23:23,0:23:909:0:0:0,-6.92369,-82.1188 0/0:39:39,0:39:1566:0:0:0,-11.7402,-141.178 0/0:50:50,0:50:1988:0:0:0,-15.0515,-179.114 dDocent_Contig_171 16 . T C 239.75 . AB=0.153061;ABP=105.468;AC=1;AF=0.0833333;AN=12;AO=42;CIGAR=1X;DP=681;DPB=681;DPRA=0;EPP=94.2121;EPPR=1390.58;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.989045;PAO=0;PQA=0;PQR=0;PRO=0;QA=1651;QR=25614;RO=639;RPL=0;RPP=94.2121;RPPR=1390.58;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=639;SRP=1390.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:55,4:55:2203:4:158:0,-3.16087,-183.842 0/0:117:116,1:116:4656:1:41:0,-31.1259,-414.855 0/1:98:83,15:83:3323:15:594:-24.2938,0,-269.62 0/0:134:125,9:125:5010:9:335:0,-9.84166,-420.276 0/0:124:115,9:115:4611:9:364:0,-4.20276,-381.768 0/0:149:145,4:145:5811:4:159:0,-30.1615,-508.085 dDocent_Contig_172 106 . N T 85.9379 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=2X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.91202;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=92;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:3:0,3:0:0:3:92:-8.58519,-0.90309,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_173 24 . C T 8585.34 . AB=0.371293;ABP=124.306;AC=6;AF=0.5;AN=12;AO=313;CIGAR=1X;DP=843;DPB=843;DPRA=0;EPP=527.667;EPPR=1134.41;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.00319489;PAIREDR=0.221172;PAO=0;PQA=0;PQR=0;PRO=0;QA=12392;QR=21088;RO=529;RPL=0;RPP=682.681;RPPR=1151.72;RPR=313;RUN=1;SAF=294;SAP=527.667;SAR=19;SRF=527;SRP=1134.41;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:59:37,22:37:1478:22:848:-58.868,0,-115.508 0/1:175:142,33:142:5679:33:1329:-67.1876,0,-458.24 0/1:63:47,16:47:1896:16:618:-36.9861,0,-151.868 0/1:147:127,20:127:5019:20:785:-26.7076,0,-407.364 0/1:163:73,89:73:2904:89:3523:-267.961,0,-212.312 0/1:236:103,133:103:4112:133:5289:-404.821,0,-299.016 dDocent_Contig_174 7 . T A 4262.36 . AB=0.397022;ABP=40.1301;AC=5;AF=0.416667;AN=12;AO=163;CIGAR=1X;DP=461;DPB=461;DPRA=0;EPP=356.96;EPPR=647.938;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.846626;PAIREDR=0.848485;PAO=0;PQA=0;PQR=0;PRO=0;QA=6215;QR=11376;RO=297;RPL=0;RPP=356.96;RPPR=647.938;RPR=163;RUN=1;SAF=163;SAP=356.96;SAR=0;SRF=297;SRP=647.938;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:77:55,22:55:2087:22:842:-52.9232,0,-164.885 0/1:92:55,37:55:2107:37:1407:-99.2179,0,-162.162 0/1:47:23,24:23:883:24:915:-68.5171,0,-65.6418 0/1:106:58,47:58:2220:47:1784:-129.091,0,-168.3 0/0:58:55,3:55:2109:3:114:0,-6.82752,-179.407 0/1:81:51,30:51:1970:30:1153:-79.6875,0,-153.155 dDocent_Contig_175 138 . A C 34.3564 . AB=0.12;ABP=34.3664;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=163;DPB=163;DPRA=0.905797;EPP=9.52472;EPPR=350.446;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.76875;PAO=0;PQA=0;PQR=0;PRO=0;QA=121;QR=6443;RO=160;RPL=3;RPP=9.52472;RPPR=350.446;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=350.446;SRR=160;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:961:0:0:0,-7.22472,-86.7901 0/0:16:16,0:16:636:0:0:0,-4.81648,-57.5754 0/0:26:26,0:26:1052:0:0:0,-7.82678,-94.97 0/0:31:31,0:31:1253:0:0:0,-9.33193,-113.036 0/1:25:22,3:22:890:3:121:-3.75424,0,-72.8823 0/0:41:41,0:41:1651:0:0:0,-12.3422,-148.817 dDocent_Contig_176 17 . T C 10102.1 . AB=0.75;ABP=202.786;AC=7;AF=0.583333;AN=12;AO=313;CIGAR=1X3M;DP=408;DPB=408;DPRA=0;EPP=682.681;EPPR=194.1;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=12512;QR=3512;RO=88;RPL=0;RPP=682.681;RPPR=194.1;RPR=313;RUN=1;SAF=313;SAP=682.681;SAR=0;SRF=88;SRP=194.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:43:15,0,28:15:596:0,28:0,1098:-86.1606,-90.676,-139.746,0,-49.4654,-41.0365 1|1:40:1,2,37:1:37:2,37:80,1470:-128.825,-122.536,-124.96,-8.12102,-4.52809,0 0|1:129:25,0,104:25:1002:0,104:0,4138:-333.556,-341.082,-423.63,0,-82.9479,-51.6407 0|1:52:12,0,39:12:479:0,39:0,1567:-125.578,-129.19,-168.641,0,-39.5142,-27.774 0|1:58:13,0,45:13:525:0,45:0,1796:-144.388,-148.302,-191.584,0,-43.6842,-30.1379 0|1:86:22,4,60:22:873:4,60:163,2443:-194.906,-188.082,-258.739,0,-58.4061,-53.7932 dDocent_Contig_177 110 . A G 1471.95 . AB=0.372881;ABP=27.8534;AC=6;AF=0.5;AN=12;AO=66;CIGAR=1X3M1X;DP=177;DPB=177;DPRA=0;EPP=146.327;EPPR=244.044;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.712121;PAIREDR=0.801802;PAO=0;PQA=0;PQR=0;PRO=0;QA=2250;QR=3856;RO=111;RPL=0;RPP=146.327;RPPR=244.044;RPR=66;RUN=1;SAF=0;SAP=146.327;SAR=66;SRF=0;SRP=244.044;SRR=111;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:29:19,10:19:641:10:349:-23.0169,0,-49.2748 0|1:40:28,12:28:975:12:409:-25.0969,0,-76.0225 0|1:38:21,17:21:737:17:585:-41.5361,0,-55.2145 0|1:23:15,8:15:525:8:276:-18.2522,0,-40.6571 0|1:32:21,11:21:731:11:359:-22.9939,0,-56.4793 0|1:15:7,8:7:247:8:272:-20.2963,0,-18.058 dDocent_Contig_178 98 . N T 64.2838 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=2X;DP=2;DPB=8;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.21888;PAIRED=1;PAIREDR=0;PAO=4;PQA=113;PQR=0;PRO=0;QA=71;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:71:-6.41135,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_179 51 . T A 13035.6 . AB=0.579301;ABP=43.6495;AC=6;AF=0.5;AN=12;AO=431;CIGAR=1X;DP=744;DPB=744;DPRA=0;EPP=938.915;EPPR=680.51;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.781903;PAIREDR=0.746795;PAO=0;PQA=0;PQR=0;PRO=0;QA=17011;QR=12358;RO=312;RPL=431;RPP=938.915;RPPR=680.51;RPR=0;RUN=1;SAF=431;SAP=938.915;SAR=0;SRF=312;SRP=680.51;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:114:46,68:46:1821:68:2660:-205.22,0,-129.779 0/1:147:58,88:58:2310:88:3395:-261.233,0,-163.699 0/1:112:40,72:40:1585:72:2816:-219.839,0,-109.163 0/1:127:53,74:53:2112:74:2956:-227.901,0,-152.033 0/1:81:30,51:30:1158:51:2050:-160.302,0,-80.1019 0/1:163:85,78:85:3372:78:3134:-233.063,0,-254.472 dDocent_Contig_180 20 . C T 480.917 . AB=0.19084;ABP=111.766;AC=2;AF=0.166667;AN=12;AO=29;CIGAR=1X;DP=419;DPB=419;DPRA=0.954861;EPP=65.983;EPPR=845.542;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.827586;PAIREDR=0.878866;PAO=0;PQA=0;PQR=0;PRO=0;QA=1136;QR=15209;RO=388;RPL=0;RPP=65.983;RPPR=845.542;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=388;SRP=845.542;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:56:55,1:55:2115:1:41:0,-12.7631,-186.433 0/0:88:84,3:84:3277:3:121:0,-15.3174,-283.729 0/0:63:63,0:63:2504:0:0:0,-18.9649,-225.504 0/0:81:80,0:80:3126:0:0:0,-24.0824,-281.188 0/1:62:49,13:49:1947:13:493:-26.034,0,-156.773 0/1:69:57,12:57:2240:12:481:-22.8712,0,-181.008 dDocent_Contig_181 44 . T C 1828.52 . AB=0.235703;ABP=788.123;AC=5;AF=0.416667;AN=12;AO=343;CIGAR=1X;DP=1677;DPB=1677;DPRA=0;EPP=747.825;EPPR=41.615;GTI=0;LEN=1;MEANALT=1;MQM=21.0962;MQMR=37.1724;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.394303;PAO=0;PQA=0;PQR=0;PRO=0;QA=13517;QR=52582;RO=1334;RPL=341;RPP=730.555;RPPR=41.615;RPR=2;RUN=1;SAF=341;SAP=730.555;SAR=2;SRF=1334;SRP=2899.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:190:145,45:145:5735:45:1793:-25.1043,0,-294.569 0/1:246:196,50:196:7717:50:1933:-13.6006,0,-457.056 0/1:250:163,87:163:6451:87:3482:-93.6748,0,-334.112 0/1:289:214,75:214:8486:75:2906:-51.3445,0,-486.13 0/1:319:271,48:271:10592:48:1881:-2.32675,0,-596.768 0/0:383:345,38:345:13601:38:1522:0,-46.4944,-845.577 dDocent_Contig_182 75 . C T 203.247 . AB=0.2;ABP=49.9141;AC=1;AF=0.0833333;AN=12;AO=21;CIGAR=1X;DP=386;DPB=386;DPRA=1;EPP=48.6112;EPPR=795.598;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.52381;PAIREDR=0.391781;PAO=0;PQA=0;PQR=0;PRO=0;QA=741;QR=12716;RO=365;RPL=21;RPP=48.6112;RPPR=795.598;RPR=0;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=365;SRP=795.598;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:60:48,12:48:1655:12:423:-20.3424,0,-131.175 0/0:74:68,6:68:2335:6:208:0,-3.21729,-191.349 0/0:37:37,0:37:1318:0:0:0,-11.1381,-118.916 0/0:59:56,3:56:1916:3:110:0,-7.49976,-162.442 0/0:59:59,0:59:1996:0:0:0,-17.7608,-179.893 0/0:97:97,0:97:3496:0:0:0,-29.1999,-314.838 dDocent_Contig_183 28 . A G 83.8107 . AB=0.107843;ABP=139.26;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=246;DPB=246;DPRA=1.41667;EPP=26.8965;EPPR=513.306;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.454545;PAIREDR=0.53617;PAO=0;PQA=0;PQR=0;PRO=0;QA=435;QR=9275;RO=235;RPL=0;RPP=26.8965;RPPR=513.306;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=235;SRP=513.306;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1173:0:0:0,-9.0309,-105.85 0/1:51:46,5:46:1811:5:198:-2.84397,0,-147.86 0/0:27:27,0:27:1039:0:0:0,-8.12781,-93.7984 0/1:51:45,6:45:1789:6:237:-6.35007,0,-145.881 0/0:29:29,0:29:1159:0:0:0,-8.72987,-104.591 0/0:58:58,0:58:2304:0:0:0,-17.4597,-207.527 dDocent_Contig_184 34 . C T 1600.86 . AB=0.136872;ABP=1643.14;AC=3;AF=0.25;AN=12;AO=237;CIGAR=1X;DP=2464;DPB=2464;DPRA=0;EPP=517.649;EPPR=4836.71;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998203;PAO=0;PQA=0;PQR=0;PRO=0;QA=7981;QR=88306;RO=2226;RPL=0;RPP=517.649;RPPR=4836.71;RPR=237;RUN=1;SAF=237;SAP=517.649;SAR=0;SRF=2226;SRP=4836.71;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:369:317,52:317:12584:52:1687:-41.0114,0,-1020.59 0/1:606:513,93:513:20396:93:3164:-102.554,0,-1651.53 0/0:239:221,18:221:8767:18:601:0,-17.5451,-734.124 0/1:457:406,51:406:16063:51:1727:-18.1302,0,-1306.85 0/0:415:405,9:405:16059:9:292:0,-98.1371,-1417.48 0/0:378:364,14:364:14437:14:510:0,-67.554,-1251.99 dDocent_Contig_185 48 . T A 80869.1 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=2366;CIGAR=1X;DP=2439;DPB=2439;DPRA=0;EPP=5080.09;EPPR=159.356;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=92741;QR=2806;RO=72;RPL=7;RPP=5080.09;RPPR=159.356;RPR=2359;RUN=1;SAF=2366;SAP=5140.71;SAR=0;SRF=72;SRP=159.356;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:304:13,291:13:486:291:11387:-980.073,-47.4467,0 1/1:411:26,385:26:1021:385:14916:-1249.27,-31.5319,0 1/1:334:22,311:22:874:311:12296:-1026.89,-21.3658,0 1/1:398:8,390:8:315:390:15261:-1343.75,-91.095,0 1/1:449:0,449:0:0:449:17615:-1584.08,-135.162,0 1/1:543:3,540:3:110:540:21266:-1902.06,-153.203,0 dDocent_Contig_186 23 . T A 1774.06 . AB=0.145688;ABP=938.576;AC=2;AF=0.166667;AN=12;AO=131;CIGAR=1X;DP=1749;DPB=1749;DPRA=1.76303;EPP=287.473;EPPR=3512.11;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5081;QR=62949;RO=1616;RPL=0;RPP=287.473;RPPR=3512.11;RPR=131;RUN=1;SAF=131;SAP=287.473;SAR=0;SRF=1616;SRP=3512.11;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:161:161,0:161:6242:0:0:0,-48.4658,-561.649 0/0:258:250,6:250:9758:6:235:0,-55.9399,-856.253 0/0:151:151,0:151:5929:0:0:0,-45.4555,-533.463 0/0:321:321,0:321:12459:0:0:0,-96.6306,-1120.64 0/1:398:317,81:317:12350:81:3152:-163.991,0,-991.004 0/1:460:416,44:416:16211:44:1694:-14.2283,0,-1319.49 dDocent_Contig_187 9 . C T 16649.2 . AB=0.539055;ABP=16.749;AC=6;AF=0.5;AN=12;AO=559;CIGAR=1X3M;DP=1037;DPB=1037;DPRA=0;EPP=1216.86;EPPR=626.223;GTI=0;LEN=1;MEANALT=6.16667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.939177;PAIREDR=0.982578;PAO=0;PQA=0;PQR=0;PRO=0;QA=21391;QR=11238;RO=287;RPL=0;RPP=1216.86;RPPR=626.223;RPR=559;RUN=1;SAF=559;SAP=1216.86;SAR=0;SRF=287;SRP=626.223;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:156:59,11,1,80:59:2322:11,1,80:435,40,3056:-232.962,-214.922,-402.627,-247.427,-402.643,-438.142,0,-155.21,-187.714,-166.927 0|1:208:61,26,3,113:61:2371:26,3,113:1008,119,4338:-337.715,-273.268,-460.274,-346.282,-458.305,-540.211,0,-112.023,-185.035,-160.815 0|1:74:22,14,5,30:22:848:14,5,30:552,199,1144:-87.2131,-48.4168,-113.831,-77.4485,-101.658,-145.571,0,-24.2047,-53.2357,-60.5919 0|1:240:66,34,14,113:66:2584:34,14,113:1320,552,4328:-335.314,-246.727,-448.963,-309.765,-413.781,-518.021,0,-104.017,-167.053,-178.454 0|1:192:37,9,7,134:37:1451:9,7,134:352,265,5102:-407.331,-389.528,-506.149,-396.748,-487.137,-513.971,0,-90.39,-97.6109,-78.9927 0|1:167:42,26,10,89:42:1662:26,10,89:1016,385,3423:-268.378,-197.496,-326.458,-249.413,-302.677,-383.191,0,-53.2663,-105.182,-109.998 dDocent_Contig_188 180 . T A 191.025 . AB=0.174603;ABP=60.9507;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=214;DPB=214;DPRA=0.702247;EPP=35.5824;EPPR=435.133;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.824121;PAO=0;PQA=0;PQR=0;PRO=0;QA=588;QR=7892;RO=199;RPL=15;RPP=35.5824;RPPR=435.133;RPR=0;RUN=1;SAF=0;SAP=35.5824;SAR=15;SRF=0;SRP=435.133;SRR=199;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:18,4:18:716:4:142:-6.50059,0,-58.1397 0/1:41:34,7:34:1352:7:282:-13.4104,0,-109.588 0/0:35:33,2:33:1315:2:82:0,-2.75637,-110.826 0/0:27:25,2:25:985:2:82:0,-0.348132,-81.164 0/0:39:39,0:39:1546:0:0:0,-11.7402,-139.381 0/0:50:50,0:50:1978:0:0:0,-15.0515,-178.213 dDocent_Contig_189 33 . T A 1844.99 . AB=0.170854;ABP=564.789;AC=5;AF=0.416667;AN=12;AO=113;CIGAR=1X;DP=762;DPB=762;DPRA=0;EPP=248.387;EPPR=1412.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4514;QR=26041;RO=649;RPL=0;RPP=248.387;RPPR=1412.3;RPR=113;RUN=1;SAF=113;SAP=248.387;SAR=0;SRF=649;SRP=1412.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:104:89,15:89:3589:15:592:-22.3096,0,-291.714 0/1:126:106,20:106:4283:20:798:-34.2031,0,-347.474 0/1:84:63,21:63:2558:21:841:-50.7168,0,-205.053 0/1:112:92,20:92:3677:20:789:-37.6065,0,-297.222 0/0:165:154,11:154:6223:11:449:0,-8.90407,-519.015 0/1:171:145,26:145:5711:26:1045:-42.8643,0,-462.318 dDocent_Contig_190 1 . N G 69.4773 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.21888;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=73;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:73:-6.9307,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_191 74 . C A 1791.04 . AB=0.219895;ABP=263.337;AC=5;AF=0.416667;AN=12;AO=86;CIGAR=1X;DP=446;DPB=446;DPRA=0;EPP=189.757;EPPR=784.74;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.825581;PAIREDR=0.547222;PAO=0;PQA=0;PQR=0;PRO=0;QA=3362;QR=14151;RO=360;RPL=80;RPP=141.278;RPPR=784.74;RPR=6;RUN=1;SAF=80;SAP=141.278;SAR=6;SRF=360;SRP=784.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:78:50,28:50:1939:28:1109:-76.6171,0,-151.245 0/1:78:61,17:61:2347:17:676:-37.6921,0,-187.961 0/1:40:32,8:32:1280:8:322:-17.3075,0,-103.425 0/1:123:103,20:103:4073:20:759:-31.5961,0,-329.546 0/1:63:52,11:52:2066:11:419:-19.0925,0,-167.172 0/0:64:62,2:62:2446:2:77:0,-11.9577,-212.997 dDocent_Contig_192 15 . G A 5079.43 . AB=0.153883;ABP=2173.58;AC=6;AF=0.5;AN=12;AO=321;CIGAR=1X2M1X;DP=2086;DPB=2086;DPRA=0;EPP=700.053;EPPR=3811.77;GTI=0;LEN=1;MEANALT=2.5;MQM=58.5919;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0.884735;PAIREDR=0.996009;PAO=0;PQA=0;PQR=0;PRO=0;QA=12650;QR=69186;RO=1754;RPL=0;RPP=700.053;RPPR=3811.77;RPR=321;RUN=1;SAF=321;SAP=700.053;SAR=0;SRF=1754;SRP=3811.77;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:283:255,26:255:9975:26:1028:-7.55014,0,-812.305 0|1:231:201,28:201:7965:28:1110:-30.9453,0,-647.367 0|1:157:95,62:95:3755:62:2434:-171.536,0,-290.719 0|1:329:277,52:277:10902:52:2048:-84.8776,0,-881.512 0|1:481:410,67:410:16177:67:2606:-90.8219,0,-1311.02 0|1:605:516,86:516:20412:86:3424:-126.21,0,-1653.91 dDocent_Contig_193 107 . N T 98.1286 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=98;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:36:-3.59827,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:62:-5.8882,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_194 15 . C T 13271.2 . AB=0.0208934;ABP=2770.39;AC=0;AF=0;AN=12;AO=29;CIGAR=1X3M1X;DP=2958;DPB=2958;DPRA=0;EPP=65.983;EPPR=4953.97;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.22045e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1149;QR=90345;RO=2280;RPL=0;RPP=65.983;RPPR=4953.97;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=2280;SRP=4953.97;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:259:227,1,31:227:8977:1,31:39,1246:-34.3548,-99.4831,-837.906,0,-735.529,-729.403 0|0:684:463,4,215:463:18366:4,215:161,8593:-568.357,-694.465,-2205.04,0,-1498.51,-1447.05 0|0:247:212,0,34:212:8438:0,34:0,1356:-47.8397,-111.658,-806.419,0,-694.75,-684.515 0|0:445:333,24,88:333:13152:24,88:949,3544:-191.855,-214.003,-1288.94,0,-1004.07,-1055.68 0|0:705:538,0,160:538:21271:0,160:0,6394:-364.724,-526.678,-2277.07,0,-1750.44,-1702.28 0|0:618:507,0,83:507:20141:0,83:0,3355:-123.982,-276.605,-1934.7,0,-1658.1,-1633.11 dDocent_Contig_195 25 . T C 229.28 . AB=0.192982;ABP=49.6779;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=344;DPB=344;DPRA=1.36957;EPP=39.9253;EPPR=713.082;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.823529;PAIREDR=0.519878;PAO=0;PQA=0;PQR=0;PRO=0;QA=684;QR=13071;RO=327;RPL=0;RPP=39.9253;RPPR=713.082;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=327;SRP=713.082;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:52:49,3:49:1975:3:122:0,-4.28107,-166.569 0/0:66:64,2:64:2540:2:79:0,-12.3703,-221.238 0/0:35:35,0:35:1370:0:0:0,-10.536,-123.543 0/0:77:76,1:76:3031:1:38:0,-19.382,-269.074 0/1:57:46,11:46:1846:11:445:-23.2468,0,-149.185 0/0:57:57,0:57:2309:0:0:0,-17.1587,-207.957 dDocent_Contig_196 40 . T C 51511.1 . AB=0.417131;ABP=259.976;AC=6;AF=0.5;AN=12;AO=1797;CIGAR=1X;DP=4308;DPB=4308;DPRA=0;EPP=3905.15;EPPR=5418.69;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999444;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=71737;QR=99017;RO=2506;RPL=0;RPP=3905.15;RPPR=5418.69;RPR=1797;RUN=1;SAF=1797;SAP=3905.15;SAR=0;SRF=2506;SRP=5444.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:581:370,209:370:14632:209:8236:-566.182,0,-1141.19 0/1:787:415,372:415:16394:372:14888:-1101.84,0,-1237.31 0/1:466:334,132:334:13238:132:5251:-332.161,0,-1050.17 0/1:744:337,407:337:13274:407:16257:-1237.86,0,-969.763 0/1:838:524,312:524:20654:312:12500:-872.329,0,-1605.46 0/1:892:526,365:526:20825:365:14605:-1044.73,0,-1604.01 dDocent_Contig_197 1 . N G 68.5135 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.21888;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=72;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:72:-6.83432,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_198 34 . T C 6080.61 . AB=0.19723;ABP=1210.1;AC=4;AF=0.333333;AN=12;AO=326;CIGAR=1X;DP=2363;DPB=2363;DPRA=0;EPP=710.91;EPPR=4421.96;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.993865;PAIREDR=0.999017;PAO=0;PQA=0;PQR=0;PRO=0;QA=12923;QR=79705;RO=2035;RPL=0;RPP=710.91;RPPR=4421.96;RPR=326;RUN=1;SAF=326;SAP=710.91;SAR=0;SRF=2035;SRP=4421.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:283:201,82:201:7877:82:3246:-207.028,0,-623.366 0/1:401:332,69:332:12918:69:2715:-123.769,0,-1041.09 0/1:336:307,29:307:12040:29:1153:-2.90763,0,-981.714 0/1:496:377,119:377:14765:119:4735:-276.762,0,-1178.56 0/0:440:437,2:437:17121:2:81:0,-124.868,-1532.01 0/0:407:381,25:381:14984:25:993:0,-32.6538,-1257.87 dDocent_Contig_199 7 . T C 9324.1 . AB=0.220786;ABP=1364.77;AC=4;AF=0.333333;AN=12;AO=447;CIGAR=1X;DP=3422;DPB=3422;DPRA=0.846483;EPP=973.658;EPPR=6456.63;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998318;PAO=0;PQA=0;PQR=0;PRO=0;QA=17225;QR=113322;RO=2972;RPL=0;RPP=973.658;RPPR=6456.63;RPR=447;RUN=1;SAF=447;SAP=973.658;SAR=0;SRF=2972;SRP=6456.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:440:327,113:327:12417:113:4334:-257.672,0,-984.569 0/1:642:473,169:473:18080:169:6532:-394.515,0,-1433.01 0/1:276:207,68:207:7856:68:2626:-153.642,0,-623.977 0/1:653:559,94:559:21319:94:3616:-128.986,0,-1720.99 0/0:654:653,0:653:24903:0:0:0,-196.573,-2239.76 0/0:757:753,3:753:28747:3:117:0,-216.893,-2574.7 dDocent_Contig_200 55 . G A 97.7526 . AB=0.145161;ABP=70.8163;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=6M1X3M;DP=332;DPB=328.8;DPRA=1.47644;EPP=24.725;EPPR=676.167;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=6.93889e-18;PAIRED=0.7;PAIREDR=0.590323;PAO=0;PQA=0;PQR=0;PRO=0;QA=341;QR=10830;RO=310;RPL=7;RPP=6.48466;RPPR=16.5715;RPR=3;RUN=1;SAF=7;SAP=6.48466;SAR=3;SRF=177;SRP=16.5715;SRR=133;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:46:44,0,0:44:1530:0,0:0,0:0,-13.2453,-137.912,-13.2453,-137.912,-137.912 0|1:62:51,2,9:51:1787:2,9:70,313:-10.094,-19.7507,-164.556,0,-139.71,-142.696 0|0:40:38,2,0:38:1352:2,0:64,0:0,-5.96283,-115.899,-11.4391,-116.501,-121.656 0|0:79:75,0,1:75:2602:0,1:0,28:0,-22.5772,-234.221,-20.3318,-232.003,-231.702 0|0:66:63,0,0:63:2190:0,0:0,0:0,-18.9649,-196.99,-18.9649,-196.99,-196.99 0|0:39:39,0,0:39:1369:0,0:0,0:0,-11.7402,-123.509,-11.7402,-123.509,-123.509 dDocent_Contig_201 1 . N G 588.11 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=16;CIGAR=1X;DP=16;DPB=16;DPRA=0;EPP=37.7539;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0625;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=620;QR=0;RO=0;RPL=0;RPP=37.7539;RPPR=0;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:110:-10.258,-0.90309,0 1/1:3:0,3:0:0:3:119:-11.0945,-0.90309,0 1/1:7:0,7:0:0:7:280:-25.5716,-2.10721,0 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 dDocent_Contig_202 10 . G T 106.663 . AB=0.131148;ABP=75.0961;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=385;DPB=385;DPRA=0.941358;EPP=20.3821;EPPR=804.376;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.4297;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.938992;PAO=0;PQA=0;PQR=0;PRO=0;QA=322;QR=14866;RO=377;RPL=0;RPP=20.3821;RPPR=821.655;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=375;SRP=804.376;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:39,0:39:1514:0:0:0,-11.7402,-136.506 0/0:113:113,0:113:4465:0:0:0,-34.0164,-400.578 0/0:54:54,0:54:2155:0:0:0,-16.2556,-193.66 0/0:73:73,0:73:2899:0:0:0,-21.9752,-260.967 0/1:61:53,8:53:2087:8:322:-10.985,0,-169.617 0/0:45:45,0:45:1746:0:0:0,-13.5463,-157.375 dDocent_Contig_203 26 . C A 4400.21 . AB=0.410256;ABP=30.2929;AC=5;AF=0.416667;AN=12;AO=164;CIGAR=1X;DP=473;DPB=473;DPRA=0;EPP=359.132;EPPR=673.995;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.341463;PAIREDR=0.313916;PAO=0;PQA=0;PQR=0;PRO=0;QA=6366;QR=12367;RO=309;RPL=0;RPP=359.132;RPPR=673.995;RPR=164;RUN=1;SAF=164;SAP=359.132;SAR=0;SRF=309;SRP=673.995;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:80:32,48:32:1281:48:1861:-143.62,0,-91.4721 0/1:78:49,29:49:1971:29:1145:-79.853,0,-154.102 0/1:37:19,18:19:768:18:705:-52.6356,0,-58.3029 0/1:83:30,53:30:1193:53:2044:-159.179,0,-82.6599 0/0:83:79,4:79:3155:4:152:0,-10.9392,-269.979 0/1:112:100,12:100:3999:12:459:-7.93517,0,-326.17 dDocent_Contig_204 98 . N C 6908.48 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=229;CIGAR=2X;DP=230;DPB=2894.5;DPRA=0;EPP=500.277;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=5329;PQA=181700;PQR=0;PRO=0;QA=7670;QR=0;RO=0;RPL=229;RPP=500.277;RPPR=0;RPR=0;RUN=1;SAF=229;SAP=500.277;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:51:0,51:0:0:51:1729:-155.558,-15.3525,0 1|1:38:0,38:0:0:38:1284:-115.52,-11.4391,0 1|1:22:0,22:0:0:22:752:-67.6561,-6.62266,0 1|1:65:0,64:0:0:64:2122:-190.918,-19.2659,0 1|1:30:0,30:0:0:30:997:-89.6996,-9.0309,0 1|1:24:0,24:0:0:24:786:-70.7174,-7.22472,0 dDocent_Contig_205 24 . C T 32066.5 . AB=0.83713;ABP=869.779;AC=8;AF=0.666667;AN=12;AO=975;CIGAR=1X;DP=1119;DPB=1119;DPRA=0;EPP=2120.2;EPPR=315.702;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=38653;QR=5706;RO=144;RPL=0;RPP=2120.2;RPPR=315.702;RPR=975;RUN=1;SAF=975;SAP=2120.2;SAR=0;SRF=144;SRP=315.702;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:202:44,158:44:1731:158:6288:-504.873,0,-95.2049 0/1:188:22,166:22:877:166:6622:-539.099,0,-22.6452 0/1:180:46,134:46:1821:134:5272:-420.156,0,-109.91 0/1:308:31,277:31:1238:277:11033:-899.534,0,-18.9727 1/1:94:0,94:0:0:94:3735:-336.171,-28.2968,0 1/1:147:1,146:1:39:146:5703:-509.222,-40.3548,0 dDocent_Contig_206 78 . A T 39444.4 . AB=0.0748634;ABP=2875.92;AC=11;AF=0.916667;AN=12;AO=137;CIGAR=1X4M;DP=1830;DPB=1830;DPRA=0;EPP=300.502;EPPR=361.303;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4981;QR=5823;RO=165;RPL=137;RPP=300.502;RPPR=361.303;RPR=0;RUN=1;SAF=137;SAP=300.502;SAR=0;SRF=165;SRP=361.303;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:158:1,44,98,14:1:35:44,98,14:1545,3404,511:-399.328,-273.883,-263.485,-122.89,0,-96.2368,-357.877,-234.978,-83.984,-356.511 1|1:307:7,106,165,27:7:232:106,165,27:3724,5674,982:-743.031,-442.028,-428.883,-284.342,0,-253.436,-664.933,-380.586,-222.9,-675.57 1|1:402:9,125,226,42:9:320:125,226,42:4499,7947,1529:-985.164,-620.798,-609.246,-340.995,0,-299.039,-862.981,-521.981,-242.179,-876.414 1|1:262:39,78,129,13:39:1365:78,129,13:2791,4582,470:-478.166,-262.312,-349.883,-116.547,0,-188.764,-451.541,-334.998,-189.232,-558.679 0|1:289:67,179,23,17:67:2370:179,23,17:6318,812,613:-494.313,0,-139.152,-448.359,-126.913,-634.47,-464.458,-143.011,-591.369,-652.375 1|1:412:42,214,129,24:42:1501:214,129,24:7556,4524,876:-848.433,-245.76,-303.725,-492.927,0,-576.479,-789.503,-296.572,-543.738,-904.663 dDocent_Contig_207 12 . C A 438.615 . AB=0.139535;ABP=245.66;AC=2;AF=0.166667;AN=12;AO=47;CIGAR=1X;DP=688;DPB=688;DPRA=0;EPP=105.07;EPPR=1394.92;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99844;PAO=0;PQA=0;PQR=0;PRO=0;QA=1849;QR=25680;RO=641;RPL=0;RPP=105.07;RPPR=1394.92;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=641;SRP=1394.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:125:117,8:117:4690:8:323:0,-8.18958,-392.567 0/1:178:159,19:159:6388:19:764:-15.4971,0,-521.065 0/0:94:91,3:91:3654:3:122:0,-16.9243,-317.5 0/0:184:181,3:181:7254:3:120:0,-44.2018,-641.313 0/1:37:26,11:26:1022:11:444:-29.1781,0,-81.1336 0/0:70:67,3:67:2672:3:76:0,-13.984,-233.513 dDocent_Contig_208 98 . N C 140.853 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=141;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:77:-7.18437,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 dDocent_Contig_209 7 . C T 129.874 . AB=0.184211;ABP=35.9253;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=132;DPB=132;DPRA=1.44118;EPP=24.725;EPPR=267.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.5574;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.942623;PAO=0;PQA=0;PQR=0;PRO=0;QA=387;QR=4690;RO=122;RPL=0;RPP=24.725;RPPR=267.93;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=122;SRP=267.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:846:0:0:0,-6.62266,-75.2075 0/0:26:24,2:24:925:2:78:0,-0.423307,-76.1633 0/0:12:12,0:12:456:0:0:0,-3.61236,-41.3855 0/1:27:23,4:23:876:4:155:-6.19763,0,-71.0297 0/0:34:33,1:33:1277:1:37:0,-6.53719,-111.522 0/1:11:8,3:8:310:3:117:-7.59905,0,-24.9522 dDocent_Contig_210 26 . C T 749.972 . AB=0.24812;ABP=76.3016;AC=2;AF=0.166667;AN=12;AO=33;CIGAR=1X;DP=357;DPB=357;DPRA=1.1875;EPP=74.6689;EPPR=706.567;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.981481;PAO=0;PQA=0;PQR=0;PRO=0;QA=1280;QR=12765;RO=324;RPL=0;RPP=74.6689;RPPR=706.567;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=324;SRP=706.567;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:40,0:40:1593:0:0:0,-12.0412,-143.61 0/0:67:67,0:67:2638:0:0:0,-20.169,-237.554 0/0:62:62,0:62:2434:0:0:0,-18.6639,-219.215 0/0:55:55,0:55:2147:0:0:0,-16.5566,-193.404 0/1:54:45,9:45:1792:9:337:-14.4157,0,-145.241 0/1:79:55,24:55:2161:24:943:-61.3951,0,-170.887 dDocent_Contig_211 17 . G T 185.061 . AB=0.195652;ABP=40.0197;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=240;DPB=240;DPRA=1.18557;EPP=22.5536;EPPR=504.62;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.888889;PAIREDR=0.623377;PAO=0;PQA=0;PQR=0;PRO=0;QA=359;QR=9306;RO=231;RPL=0;RPP=22.5536;RPPR=504.62;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=231;SRP=504.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1207:0:0:0,-9.0309,-108.904 0/0:33:33,0:33:1316:0:0:0,-9.93399,-118.704 0/0:38:38,0:38:1529:0:0:0,-11.4391,-137.849 0/1:46:37,9:37:1488:9:359:-18.8248,0,-120.313 0/0:37:37,0:37:1497:0:0:0,-11.1381,-134.97 0/0:56:56,0:56:2269:0:0:0,-16.8577,-204.363 dDocent_Contig_212 36 . T C 287.121 . AB=0.121951;ABP=257.496;AC=2;AF=0.166667;AN=12;AO=32;CIGAR=1X;DP=551;DPB=551;DPRA=1.03056;EPP=72.4974;EPPR=1130;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5625;PAIREDR=0.379576;PAO=0;PQA=0;PQR=0;PRO=0;QA=1289;QR=20756;RO=519;RPL=0;RPP=72.4974;RPPR=1130;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=519;SRP=1130;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:104:93,11:93:3681:11:448:-9.36865,0,-300.008 0/1:101:87,14:87:3447:14:558:-20.157,0,-279.871 0/0:70:65,5:65:2620:5:202:0,-2.51023,-217.357 0/0:96:94,2:94:3782:2:81:0,-21.2131,-332.695 0/0:82:82,0:82:3282:0:0:0,-24.6845,-295.435 0/0:98:98,0:98:3944:0:0:0,-29.5009,-354.945 dDocent_Contig_213 110 . C T 7071.38 . AB=0.486316;ABP=3.78289;AC=7;AF=0.583333;AN=12;AO=287;CIGAR=1X;DP=537;DPB=537;DPRA=0;EPP=626.223;EPPR=545.878;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.965157;PAIREDR=0.968;PAO=0;PQA=0;PQR=0;PRO=0;QA=9663;QR=8525;RO=250;RPL=0;RPP=626.223;RPPR=545.878;RPR=287;RUN=1;SAF=0;SAP=626.223;SAR=287;SRF=0;SRP=545.878;SRR=250;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:74:37,37:37:1266:37:1201:-86.1025,0,-91.9634 0/1:113:73,40:73:2508:40:1324:-85.4343,0,-191.964 0/1:66:52,14:52:1773:14:468:-22.572,0,-139.986 0/1:124:64,60:64:2165:60:2046:-147.088,0,-157.792 0/1:98:18,80:18:616:80:2715:-215.103,0,-26.2617 1/1:62:6,56:6:197:56:1909:-154.036,-0.611392,0 dDocent_Contig_214 51 . A G 397.967 . AB=0.275862;ABP=28.3192;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1M3D1X;DP=200;DPB=190.4;DPRA=2.04225;EPP=37.7539;EPPR=366.406;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.8125;PAIREDR=0.967213;PAO=0;PQA=0;PQR=0;PRO=0;QA=636;QR=7217;RO=183;RPL=0;RPP=37.7539;RPPR=366.406;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=183;SRP=400.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:20:19,0:19:749:0:0:0,-5.71957,-67.6211 0|0:18:18,0:18:708:0:0:0,-5.41854,-64.0495 0|0:21:21,0:21:826:0:0:0,-6.32163,-74.658 0|1:58:42,16:42:1657:16:636:-40.1154,0,-131.914 0|0:54:54,0:54:2147:0:0:0,-16.2556,-193.42 0|0:29:29,0:29:1130:0:0:0,-8.72987,-101.988 dDocent_Contig_216 147 . C G 137.916 . AB=0.24;ABP=17.6895;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=122;DPB=122;DPRA=1.28866;EPP=16.0391;EPPR=254.901;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.333333;PAIREDR=0.732759;PAO=0;PQA=0;PQR=0;PRO=0;QA=233;QR=4627;RO=116;RPL=6;RPP=16.0391;RPPR=254.901;RPR=0;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=254.901;SRR=116;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:19,6:19:754:6:233:-13.8093,0,-60.6498 0/0:15:15,0:15:601:0:0:0,-4.51545,-54.4264 0/0:21:21,0:21:851:0:0:0,-6.32163,-76.9009 0/0:21:21,0:21:807:0:0:0,-6.32163,-72.9416 0/0:24:24,0:24:964:0:0:0,-7.22472,-87.0578 0/0:16:16,0:16:650:0:0:0,-4.81648,-58.8329 dDocent_Contig_217 38 . G A 4486.28 . AB=0.210805;ABP=688.763;AC=5;AF=0.416667;AN=12;AO=199;CIGAR=1X2M1X;DP=944;DPB=944;DPRA=0;EPP=435.133;EPPR=1507.84;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.997114;PAO=0;PQA=0;PQR=0;PRO=0;QA=7814;QR=27401;RO=693;RPL=0;RPP=435.133;RPPR=1507.84;RPR=199;RUN=1;SAF=199;SAP=435.133;SAR=0;SRF=693;SRP=1507.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:98:81,17,0:81:3207:17,0:673,0:-31.4023,0,-259.22,-55.7857,-264.338,-319.728 0|1:149:126,23,0:126:4952:23,0:902,0:-36.6359,0,-400.753,-74.5657,-407.677,-481.851 0|1:176:128,47,0:128:5009:47,0:1862,0:-115.025,0,-397.95,-153.557,-412.099,-565.358 0|1:146:94,51,0:94:3705:51,0:1988,0:-135.078,0,-289.442,-163.375,-304.794,-468.178 0|0:204:149,24,29:149:5927:24,29:958,1170:-51.5947,-17.548,-498.314,0,-409.094,-479.265 0|1:171:115,37,19:115:4601:37,19:1431,766:-82.8894,0,-367.866,-54.3631,-315.864,-427.66 dDocent_Contig_218 48 . C G 361.944 . AB=0.143646;ABP=202.654;AC=2;AF=0.166667;AN=12;AO=37;CIGAR=1X;DP=567;DPB=567;DPRA=0.788636;EPP=83.3548;EPPR=1110.87;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99434;PAO=0;PQA=0;PQR=0;PRO=0;QA=1445;QR=20775;RO=530;RPL=0;RPP=83.3548;RPPR=1110.87;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=530;SRP=1153.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:72:60,12:60:2368:12:461:-20.1594,0,-191.612 0/0:91:84,7:84:3292:7:276:0,-2.18618,-271.138 0/0:75:71,4:71:2781:4:160:0,-7.79345,-235.618 0/1:109:95,14:95:3758:14:548:-16.8485,0,-305.428 0/0:121:121,0:121:4725:0:0:0,-36.4246,-425.183 0/0:99:99,0:99:3851:0:0:0,-29.802,-346.608 dDocent_Contig_219 40 . T A 1035.39 . AB=0.2;ABP=202.351;AC=3;AF=0.25;AN=12;AO=62;CIGAR=1X;DP=530;DPB=530;DPRA=0;EPP=137.642;EPPR=991.198;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.580645;PAIREDR=0.817987;PAO=0;PQA=0;PQR=0;PRO=0;QA=2426;QR=16425;RO=467;RPL=0;RPP=137.642;RPPR=991.198;RPR=62;RUN=1;SAF=62;SAP=137.642;SAR=0;SRF=467;SRP=1017.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:68:67,1:67:2322:1:41:0,-16.3755,-205.113 0/1:92:80,11:80:2819:11:439:-12.3635,0,-226.445 0/0:106:98,8:98:3466:8:312:0,-3.46978,-283.656 0/0:101:99,2:99:3498:2:65:0,-24.2318,-308.821 0/1:55:45,10:45:1597:10:394:-19.2608,0,-127.451 0/1:108:78,30:78:2723:30:1175:-73.524,0,-212.763 dDocent_Contig_220 10 . G T 1230.95 . AB=0.268817;ABP=89.3555;AC=4;AF=0.333333;AN=12;AO=50;CIGAR=1X;DP=331;DPB=331;DPRA=0.641379;EPP=111.584;EPPR=613.194;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2001;QR=11104;RO=281;RPL=0;RPP=111.584;RPPR=613.194;RPR=50;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=281;SRP=613.194;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:115:115,0:115:4565:0:0:0,-34.6184,-410.78 0/0:30:30,0:30:1175:0:0:0,-9.0309,-106.03 0/1:17:14,3:14:554:3:121:-6.16248,0,-45.0798 0/1:69:58,11:58:2300:11:443:-19.4552,0,-186.391 0/1:48:40,8:40:1583:8:325:-15.1702,0,-128.259 0/1:52:24,28:24:927:28:1112:-84.7126,0,-68.0646 dDocent_Contig_221 30 . C T 37.2083 . AB=0.0915493;ABP=208.78;AC=1;AF=0.0833333;AN=12;AO=29;CIGAR=1X;DP=745;DPB=745;DPRA=0.978175;EPP=65.983;EPPR=1557.78;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997207;PAO=0;PQA=0;PQR=0;PRO=0;QA=1150;QR=28374;RO=716;RPL=0;RPP=65.983;RPPR=1557.78;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=716;SRP=1557.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:118:109,9:109:4280:9:364:0,-2.39658,-352.031 0/1:142:129,13:129:5144:13:516:-4.03946,0,-420.085 0/0:97:97,0:97:3859:0:0:0,-29.1999,-347.318 0/0:100:94,6:94:3721:6:230:0,-9.03922,-313.837 0/0:155:155,0:155:6142:0:0:0,-46.6596,-552.554 0/0:133:132,1:132:5228:1:40:0,-36.0413,-466.393 dDocent_Contig_222 8 . T G 29664.5 . AB=0.1165;ABP=2689.49;AC=0;AF=0;AN=12;AO=245;CIGAR=1X1M1X;DP=2103;DPB=2103;DPRA=0;EPP=535.021;EPPR=1711.96;GTI=0;LEN=1;MEANALT=3.66667;MQM=59.9878;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.00381194;PAO=0;PQA=0;PQR=0;PRO=0;QA=9249;QR=30359;RO=787;RPL=0;RPP=535.021;RPPR=1711.96;RPR=245;RUN=1;SAF=245;SAP=535.021;SAR=0;SRF=787;SRP=1711.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:274:89,38,11,135:89:3425:38,11,135:1438,431,5409:-418.736,-327.645,-597.403,-411.374,-574.689,-689.261,0,-163.324,-247.055,-240.57 0|0:412:104,52,17,238:104:4024:52,17,238:1975,665,9569:-757.227,-626.574,-941.466,-733.863,-902.448,-1059.29,0,-168.59,-275.879,-258.906 0|0:283:148,27,17,91:148:5701:27,17,91:1032,672,3678:-258.686,-218.561,-678.535,-249.838,-633.261,-712.823,0,-383.432,-414.71,-440.719 0|0:372:126,52,20,172:126:4869:52,20,172:1953,806,6940:-534.075,-412.02,-796.274,-508.183,-748.106,-902.072,0,-239.931,-336.095,-348.141 0|0:351:157,50,21,123:157:6049:50,21,123:1872,829,4952:-360.679,-254.636,-736.274,-339.818,-683.203,-830.19,0,-343.392,-428.577,-459.674 0|0:411:163,26,12,208:163:6291:26,12,208:979,477,8374:-641.041,-609.889,-1118.71,-650.851,-1087.28,-1163.89,0,-436.432,-477.395,-454.04 dDocent_Contig_223 24 . A T 629.025 . AB=0.100967;ABP=1290.61;AC=3;AF=0.25;AN=12;AO=162;CIGAR=1X;DP=1846;DPB=1846;DPRA=0;EPP=354.789;EPPR=3564.23;GTI=0;LEN=1;MEANALT=2.16667;MQM=56.821;MQMR=59.8218;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0740741;PAIREDR=0.0991484;PAO=0;PQA=0;PQR=0;PRO=0;QA=6473;QR=65540;RO=1644;RPL=0;RPP=354.789;RPPR=3572.91;RPR=162;RUN=1;SAF=162;SAP=354.789;SAR=0;SRF=1643;SRP=3564.23;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:286:255,23:255:10126:23:908:0,-3.85016,-830.24 0/0:436:399,33:399:15945:33:1316:0,-12.3761,-1315.44 0/1:296:250,34:250:9964:34:1346:-35.0162,0,-809.877 0/1:331:290,29:290:11557:29:1172:-9.11422,0,-942.827 0/0:193:180,12:180:7155:12:488:0,-13.9265,-599.341 0/1:304:270,31:270:10793:31:1243:-20.3816,0,-879.422 dDocent_Contig_224 84 . A T 74282 . AB=0.852713;ABP=421.195;AC=11;AF=0.916667;AN=12;AO=2432;CIGAR=1X;DP=2585;DPB=2585;DPRA=0;EPP=5284.03;EPPR=333.074;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.988076;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=87290;QR=5395;RO=152;RPL=2432;RPP=5284.03;RPPR=333.074;RPR=0;RUN=1;SAF=2432;SAP=5284.03;SAR=0;SRF=152;SRP=333.074;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:387:56,330:56:1973:330:11582:-925.931,0,-61.5133 1/1:454:34,420:34:1200:420:14741:-1218.14,-28.362,0 1/1:409:29,380:29:1057:380:13936:-1158.42,-27.6801,0 1/1:404:17,387:17:612:387:14003:-1204.53,-66.2049,0 1/1:521:5,516:5:171:516:18710:-1667.62,-141.112,0 1/1:410:11,399:11:382:399:14318:-1253.57,-88.7097,0 dDocent_Contig_225 15 . A T 52.2437 . AB=0.1;ABP=114.19;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=249;DPB=249;DPRA=1.3271;EPP=24.725;EPPR=521.992;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.3;PAIREDR=0.573222;PAO=0;PQA=0;PQR=0;PRO=0;QA=407;QR=9522;RO=239;RPL=0;RPP=24.725;RPPR=521.992;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=239;SRP=521.992;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:43:39,4:39:1550:4:163:-2.11414,0,-126.802 0/1:37:33,4:33:1309:4:163:-3.92032,0,-106.937 0/0:48:48,0:48:1938:0:0:0,-14.4494,-174.612 0/0:62:60,2:60:2376:2:81:0,-10.9781,-206.311 0/0:35:35,0:35:1378:0:0:0,-10.536,-124.28 0/0:24:24,0:24:971:0:0:0,-7.22472,-87.6884 dDocent_Contig_226 17 . G T 1500.61 . AB=0.14645;ABP=736.955;AC=1;AF=0.0833333;AN=12;AO=153;CIGAR=1X;DP=4040;DPB=4040;DPRA=1.32585;EPP=335.246;EPPR=8441.35;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.998713;PAO=0;PQA=0;PQR=0;PRO=0;QA=6078;QR=153071;RO=3886;RPL=0;RPP=335.246;RPPR=8441.35;RPR=153;RUN=1;SAF=153;SAP=335.246;SAR=0;SRF=3886;SRP=8441.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:488:488,0:488:19228:0:0:0,-146.903,-1729.05 0/0:756:756,0:756:29595:0:0:0,-227.579,-2661.13 0/0:493:493,0:493:19454:0:0:0,-148.408,-1749.36 0/0:811:809,1:809:31916:1:41:0,-240.149,-2865.64 0/1:676:577,99:577:22759:99:3932:-150.38,0,-1843.02 0/0:816:763,53:763:30119:53:2105:0,-56.0059,-2518.54 dDocent_Contig_227 20 . A T 25083.6 . AB=0.0928962;ABP=1583.63;AC=0;AF=0;AN=12;AO=102;CIGAR=1X1M1X;DP=1098;DPB=1098;DPRA=0;EPP=224.5;EPPR=441.648;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3997;QR=7945;RO=202;RPL=0;RPP=224.5;RPPR=441.648;RPR=102;RUN=1;SAF=102;SAP=224.5;SAR=0;SRF=202;SRP=441.648;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:118:13,11,94:13:519:11,94:437,3719:-302.121,-270.061,-309.496,0,-6.77441,-14.45 0|0:184:19,12,153:19:749:12,153:480,6077:-494.538,-460.718,-518.725,0,-22.0743,-15.5584 0|0:272:74,30,168:74:2916:30,168:1185,6628:-523.006,-447.775,-678.639,0,-142.387,-189.321 0|0:175:37,25,111:37:1460:25,111:969,4332:-344.902,-276.442,-389.043,0,-40.5332,-86.7151 0|0:169:40,15,114:40:1569:15,114:574,4535:-361.336,-326.282,-450.789,0,-81.9364,-94.713 0|0:180:19,9,151:19:732:9,151:352,5980:-486.455,-463.236,-520.623,0,-31.1623,-14.6499 dDocent_Contig_228 98 . N A 303.985 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=10;CIGAR=1X;DP=10;DPB=10;DPRA=0;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=312;QR=0;RO=0;RPL=10;RPP=24.725;RPPR=0;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:68:-6.45788,-0.60206,0 1/1:3:0,3:0:0:3:93:-8.6784,-0.90309,0 1/1:3:0,3:0:0:3:83:-7.74503,-0.90309,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 dDocent_Contig_229 13 . G A 120259 . AB=0.671558;ABP=1466.32;AC=6;AF=0.5;AN=12;AO=3844;CIGAR=1X;DP=5724;DPB=5724;DPRA=0;EPP=8350.15;EPPR=4076.69;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=152955;QR=74773;RO=1876;RPL=0;RPP=8350.15;RPPR=4076.69;RPR=3844;RUN=1;SAF=3844;SAP=8350.15;SAR=0;SRF=1876;SRP=4076.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:727:327,400:327:12982:400:15892:-1210.2,0,-948.584 0/1:929:521,408:521:20878:408:16157:-1173.24,0,-1597.55 0/1:681:280,400:280:11268:400:15988:-1232.52,0,-808.198 0/1:845:355,490:355:14025:490:19502:-1499.22,0,-1006.84 0/1:1159:148,1009:148:5946:1009:40164:-3262.44,0,-186.316 0/1:1383:245,1137:245:9674:1137:45252:-3652.3,0,-453.928 dDocent_Contig_230 13 . G C 218.422 . AB=0.208955;ABP=52.306;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X2M1X;DP=208;DPB=208;DPRA=1.18947;EPP=39.9253;EPPR=417.762;GTI=0;LEN=1;MEANALT=1;MQM=49.4706;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=569;QR=7528;RO=191;RPL=0;RPP=39.9253;RPPR=417.762;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=191;SRP=417.762;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:28:26,2:26:1023:2:66:0,-2.20017,-86.14 0|0:23:23,0:23:898:0:0:0,-6.92369,-81.1245 0|0:50:50,0:50:1977:0:0:0,-15.0515,-178.143 0|1:67:53,14:53:2107:14:469:-22.1608,0,-169.654 0|0:22:22,0:22:861:0:0:0,-6.62266,-77.8045 0|0:18:17,1:17:662:1:34:0,-2.02197,-56.5136 dDocent_Contig_231 47 . A G 45735.3 . AB=0.855923;ABP=1034.03;AC=8;AF=0.666667;AN=12;AO=1409;CIGAR=1X;DP=1580;DPB=1580;DPRA=0;EPP=3062.61;EPPR=374.332;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.967353;PAIREDR=0.0175439;PAO=0;PQA=0;PQR=0;PRO=0;QA=55447;QR=6817;RO=171;RPL=0;RPP=3062.61;RPPR=374.332;RPR=1409;RUN=1;SAF=1409;SAP=3062.61;SAR=0;SRF=171;SRP=374.332;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:300:15,285:15:600:285:11220:-954.761,-35.9706,0 0/1:420:57,363:57:2279:363:14274:-1157.23,0,-78.8407 0/1:221:28,193:28:1115:193:7566:-614.055,0,-34.1055 1/1:343:21,322:21:828:322:12760:-1072.7,-28.421,0 0/1:154:34,120:34:1352:120:4700:-376.578,0,-75.5849 0/1:142:16,126:16:643:126:4927:-400.602,0,-15.4568 dDocent_Contig_232 20 . C T 492.202 . AB=0.16185;ABP=174.833;AC=2;AF=0.166667;AN=12;AO=38;CIGAR=1X;DP=577;DPB=577;DPRA=0;EPP=85.5263;EPPR=1173.43;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.894737;PAIREDR=0.935065;PAO=0;PQA=0;PQR=0;PRO=0;QA=1511;QR=21677;RO=539;RPL=0;RPP=85.5263;RPPR=1173.43;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=539;SRP=1173.43;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:72:69,3:69:2786:3:114:0,-11.0449,-240.211 0/0:92:91,1:91:3647:1:41:0,-23.6002,-324.143 0/0:135:131,4:131:5227:4:148:0,-26.9643,-456.604 0/0:105:103,2:103:4143:2:81:0,-23.9224,-365.143 0/1:84:75,9:75:3038:9:359:-7.38401,0,-248.204 0/1:89:70,19:70:2836:19:768:-42.6498,0,-228.538 dDocent_Contig_234 90 . A T 75.1466 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1M5D1M7X1I5X;DP=2;DPB=1.63158;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.21888;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=79;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:79:-7.49763,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_235 35 . T A 2651.59 . AB=0.0428571;ABP=130.072;AC=0;AF=0;AN=12;AO=3;CIGAR=2M1X2M2I3M1X1M1X4M1I2M;DP=483;DPB=650.765;DPRA=1.12903;EPP=9.52472;EPPR=207.129;GTI=0;LEN=1;MEANALT=13;MQM=6;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0;PAIREDR=0.680851;PAO=3;PQA=0;PQR=0;PRO=3;QA=18;QR=3688;RO=94;RPL=0;RPP=9.52472;RPPR=207.129;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=94;SRP=207.129;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:70:9,32,0,0,3:9:351:32,0,0,3:794,0,0,18:-51.1015,0,-19.2489,-53.8108,-28.8818,-82.6818,-53.8108,-28.8818,-82.6818,-82.6818,-53.7599,-28.8424,-82.6303,-82.6303,-81.7272 0|0:95:16,42,0,0,0:16:633:42,0,0,0:967,0,0,0:-59.0361,0,-39.4966,-63.8526,-52.1399,-115.977,-63.8526,-52.1399,-115.977,-115.977,-63.8526,-52.1399,-115.977,-115.977,-115.977 0|0:62:20,7,0,3,0:20:788:7,0,3,0:96,0,27,0:0,-1.14381,-63.9194,-6.0206,-66.0266,-70.9043,-5.24242,-65.2498,-70.1248,-69.2217,-6.0206,-66.0266,-70.9043,-70.1248,-70.9043 0|0:117:23,45,0,0,0:23:901:45,0,0,0:1242,0,0,0:-79.6193,0,-60.6048,-86.543,-74.1512,-160.665,-86.543,-74.1512,-160.665,-160.665,-86.543,-74.1512,-160.665,-160.665,-160.665 0|0:58:14,14,3,0,0:14:543:14,3,0,0:354,113,0,0:-19.8121,0,-40.4118,-15.4289,-36.0323,-59.1592,-24.0265,-44.6262,-60.0623,-68.658,-24.0265,-44.6262,-60.0623,-68.658,-68.658 0|0:81:12,29,0,0,0:12:472:29,0,0,0:876,0,0,0:-58.7904,0,-30.1192,-62.4027,-38.8491,-101.245,-62.4027,-38.8491,-101.245,-101.245,-62.4027,-38.8491,-101.245,-101.245,-101.245 dDocent_Contig_238 107 . N C 340.466 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=18;CIGAR=1X;DP=18;DPB=18;DPRA=0;EPP=42.0968;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=24.2778;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=539;QR=0;RO=0;RPL=0;RPP=42.0968;RPPR=0;RPR=18;RUN=1;SAF=0;SAP=42.0968;SAR=18;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:20:-1.99572,-0.30103,0 1/1:3:0,3:0:0:3:83:-4.9709,-0.90309,0 1/1:6:0,6:0:0:6:167:-7.85815,-1.80618,0 1/1:3:0,3:0:0:3:105:-8.22408,-0.90309,0 1/1:1:0,1:0:0:1:35:-0.899047,-0.30103,0 1/1:4:0,4:0:0:4:129:-9.29599,-1.20412,0 dDocent_Contig_241 39 . G A 104.782 . AB=0.208333;ABP=20.744;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=64;DPB=64;DPRA=1.78261;EPP=16.0391;EPPR=128.956;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=238;QR=2257;RO=58;RPL=0;RPP=16.0391;RPPR=128.956;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=58;SRP=128.956;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:7:6,1:6:232:1:41:-1.98736,0,-19.1388 0/0:12:12,0:12:484:0:0:0,-3.61236,-43.911 0/0:6:6,0:6:232:0:0:0,-1.80618,-21.2465 0/0:17:16,1:16:604:1:41:0,-1.02294,-50.5837 0/0:5:5,0:5:193:0:0:0,-1.50515,-17.7376 0/1:17:13,4:13:512:4:156:-9.2982,0,-41.3011 dDocent_Contig_242 209 . N G 87.9218 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=30;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=120;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:41:-3.74612,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:79:-4.71968,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_243 39 . A G 839.582 . AB=0.198068;ABP=166.92;AC=2;AF=0.166667;AN=12;AO=41;CIGAR=1X;DP=935;DPB=935;DPRA=0.568681;EPP=92.0407;EPPR=1942.14;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1627;QR=35491;RO=893;RPL=0;RPP=92.0407;RPPR=1942.14;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=893;SRP=1942.14;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:72:72,0:72:2881:0:0:0,-21.6742,-259.382 0/1:134:118,16:118:4649:16:635:-17.1444,0,-377.996 0/0:103:103,0:103:4074:0:0:0,-31.0061,-366.634 0/1:73:47,25:47:1881:25:992:-67.6274,0,-147.547 0/0:361:361,0:361:14372:0:0:0,-108.672,-1292.39 0/0:192:192,0:192:7634:0:0:0,-57.7978,-686.661 dDocent_Contig_244 7 . T A 82.8691 . AB=0.142857;ABP=49.5419;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=234;DPB=234;DPRA=1.09375;EPP=16.0391;EPPR=498.106;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.679825;PAO=0;PQA=0;PQR=0;PRO=0;QA=232;QR=8738;RO=228;RPL=0;RPP=16.0391;RPPR=498.106;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=228;SRP=498.106;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:48,0:48:1845:0:0:0,-14.4494,-166.299 0/0:37:37,0:37:1427:0:0:0,-11.1381,-128.71 0/0:26:26,0:26:997:0:0:0,-7.82678,-90.0387 0/0:52:52,0:52:1996:0:0:0,-15.6536,-179.878 0/0:29:29,0:29:1104:0:0:0,-8.72987,-99.6616 0/1:42:36,6:36:1369:6:232:-8.60567,0,-110.852 dDocent_Contig_245 12 . G A 91.9525 . AB=0.142857;ABP=49.5419;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=226;DPB=226;DPRA=0.954248;EPP=20.3821;EPPR=476.391;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.25;PAIREDR=0.504587;PAO=0;PQA=0;PQR=0;PRO=0;QA=324;QR=8728;RO=218;RPL=0;RPP=20.3821;RPPR=476.391;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=218;SRP=476.391;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:894:0:0:0,-6.62266,-80.7657 0/0:44:44,0:44:1759:0:0:0,-13.2453,-158.524 0/0:31:29,2:29:1165:2:82:0,-1.55225,-97.3482 0/1:42:36,6:36:1439:6:242:-9.51369,0,-117.116 0/0:49:49,0:49:1947:0:0:0,-14.7505,-175.423 0/0:38:38,0:38:1524:0:0:0,-11.4391,-137.401 dDocent_Contig_246 7 . T C 7243.39 . AB=0.282507;ABP=442.231;AC=6;AF=0.5;AN=12;AO=302;CIGAR=1X;DP=1069;DPB=1069;DPRA=0;EPP=658.795;EPPR=1666.36;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.993377;PAIREDR=0.877285;PAO=0;PQA=0;PQR=0;PRO=0;QA=11650;QR=29260;RO=766;RPL=0;RPP=658.795;RPPR=1666.36;RPR=302;RUN=1;SAF=302;SAP=658.795;SAR=0;SRF=766;SRP=1666.36;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:152:88,63:88:3340:63:2426:-172.985,0,-255.19 0/1:166:126,40:126:4830:40:1549:-89.7083,0,-384.764 0/1:127:84,43:84:3214:43:1656:-111.073,0,-251.179 0/1:139:108,31:108:4135:31:1186:-65.191,0,-330.396 0/1:191:131,60:131:5007:60:2313:-150.886,0,-393.154 0/1:294:229,65:229:8734:65:2520:-138.492,0,-697.308 dDocent_Contig_247 123 . G A 197.691 . AB=0.24;ABP=32.3686;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=126;DPB=126;DPRA=1.52;EPP=33.4109;EPPR=246.215;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.785714;PAIREDR=0.875;PAO=0;PQA=0;PQR=0;PRO=0;QA=451;QR=4249;RO=112;RPL=0;RPP=33.4109;RPPR=246.215;RPR=14;RUN=1;SAF=0;SAP=33.4109;SAR=14;SRF=0;SRP=246.215;SRR=112;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:457:0:0:0,-3.61236,-41.4782 0/0:13:13,0:13:500:0:0:0,-3.91339,-45.3477 0/0:26:24,2:24:928:2:62:0,-1.93784,-77.9476 0/0:25:25,0:25:924:0:0:0,-7.52575,-83.4733 0/1:25:20,5:20:741:5:145:-5.81084,0,-59.4839 0/1:25:18,7:18:699:7:244:-14.7717,0,-55.7176 dDocent_Contig_248 128 . T C 149.194 . AB=0.214286;ABP=62.5707;AC=4;AF=0.333333;AN=12;AO=19;CIGAR=1X;DP=172;DPB=172;DPRA=0.502041;EPP=44.2683;EPPR=335.246;GTI=0;LEN=1;MEANALT=1;MQM=27.7895;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=646;QR=5794;RO=153;RPL=0;RPP=44.2683;RPPR=335.246;RPR=19;RUN=1;SAF=0;SAP=44.2683;SAR=19;SRF=0;SRP=335.246;SRR=153;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:10,2:10:373:2:70:-1.6989,0,-30.3073 0/1:29:24,5:24:891:5:187:-3.36017,0,-71.7733 0/1:23:19,4:19:727:4:119:-1.56809,0,-58.8352 0/1:20:13,7:13:492:7:234:-10.6766,0,-38.6044 0/0:49:49,0:49:1865:0:0:0,-14.7505,-168.099 0/0:39:38,1:38:1446:1:36:0,-8.91909,-127.597 dDocent_Contig_249 107 . N C 90.0951 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=93;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,1:0:0:1:15:-1.39999,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:78:-7.27914,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_252 98 . N C 47.6675 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.21888;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=50;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:50:-4.74971,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_253 53 . C T 5025.77 . AB=0.370741;ABP=75.4261;AC=5;AF=0.416667;AN=12;AO=189;CIGAR=1X;DP=571;DPB=571;DPRA=0;EPP=413.419;EPPR=832.513;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994764;PAO=0;PQA=0;PQR=0;PRO=0;QA=7431;QR=15344;RO=382;RPL=189;RPP=413.419;RPPR=832.513;RPR=0;RUN=1;SAF=189;SAP=413.419;SAR=0;SRF=382;SRP=832.513;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:67:53,14:53:2119:14:566:-31.1136,0,-170.718 0/0:72:68,4:68:2749:4:156:0,-7.25921,-233.094 0/1:50:38,12:38:1525:12:486:-29.0401,0,-122.441 0/1:117:83,34:83:3335:34:1307:-82.666,0,-264.981 0/1:134:73,61:73:2922:61:2373:-173.387,0,-222.735 0/1:131:67,64:67:2694:64:2543:-189.572,0,-203.134 dDocent_Contig_254 12 . A C 65.4345 . AB=0.2;ABP=14.7363;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=140;DPB=140;DPRA=1.08955;EPP=16.0391;EPPR=293.988;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.776119;PAO=0;PQA=0;PQR=0;PRO=0;QA=245;QR=5363;RO=134;RPL=0;RPP=16.0391;RPPR=293.988;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=134;SRP=293.988;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:914:0:0:0,-6.92369,-82.5668 0/0:27:25,2:25:997:2:82:0,-0.348132,-82.2478 0/1:15:12,3:12:485:3:122:-6.85704,0,-39.4849 0/0:31:30,1:30:1203:1:41:0,-5.23736,-104.45 0/0:32:32,0:32:1278:0:0:0,-9.63296,-115.289 0/0:12:12,0:12:486:0:0:0,-3.61236,-44.0913 dDocent_Contig_255 65 . C A 1069.96 . AB=0.121528;ABP=1077.98;AC=3;AF=0.25;AN=12;AO=127;CIGAR=1X;DP=2024;DPB=2024;DPRA=0.856919;EPP=278.787;EPPR=4120.12;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999473;PAO=0;PQA=0;PQR=0;PRO=0;QA=4928;QR=74811;RO=1896;RPL=127;RPP=278.787;RPPR=4120.12;RPR=0;RUN=1;SAF=127;SAP=278.787;SAR=0;SRF=1896;SRP=4120.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:183:161,22:161:6305:22:820:-19.0093,0,-512.123 0/1:347:306,41:306:12029:41:1635:-42.9203,0,-977.315 0/0:416:395,21:395:15571:21:832:0,-50.0362,-1325.01 0/1:334:291,42:291:11530:42:1634:-46.6759,0,-936.31 0/0:383:383,0:383:15232:0:0:0,-115.294,-1369.71 0/0:361:360,1:360:14144:1:7:0,-107.972,-1271.23 dDocent_Contig_256 18 . T C 445.702 . AB=0.104425;ABP=770.939;AC=1;AF=0.0833333;AN=12;AO=71;CIGAR=1X;DP=2823;DPB=2823;DPRA=1.48244;EPP=157.185;EPPR=5972.39;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999272;PAO=0;PQA=0;PQR=0;PRO=0;QA=2838;QR=99586;RO=2749;RPL=0;RPP=157.185;RPPR=5972.39;RPR=71;RUN=1;SAF=71;SAP=157.185;SAR=0;SRF=2749;SRP=5972.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:356:356,0:356:12870:0:0:0,-107.167,-1157.95 0/0:574:570,4:570:20574:4:161:0,-157.916,-1836 0/0:356:354,0:354:12814:0:0:0,-106.565,-1152.74 0/0:450:448,1:448:16154:1:10:0,-134.262,-1452.34 0/0:522:515,7:515:18631:7:280:0,-131.567,-1650.54 0/1:565:506,59:506:18543:59:2387:-44.8889,0,-1498.06 dDocent_Contig_257 37 . C A 661.777 . AB=0.254386;ABP=62.7448;AC=3;AF=0.25;AN=12;AO=33;CIGAR=1X;DP=354;DPB=354;DPRA=0.405128;EPP=74.6689;EPPR=700.053;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.757576;PAIREDR=0.987539;PAO=0;PQA=0;PQR=0;PRO=0;QA=1281;QR=12684;RO=321;RPL=0;RPP=74.6689;RPPR=700.053;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=321;SRP=700.053;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:6,13:6:241:13:516:-41.0665,0,-16.3473 0/0:76:74,2:74:2923:2:80:0,-15.2865,-255.591 0/1:50:44,6:44:1713:6:209:-4.08946,0,-139.345 0/1:45:35,10:35:1392:10:398:-22.6312,0,-111.993 0/0:47:45,2:45:1793:2:78:0,-6.74563,-154.19 0/0:117:117,0:117:4622:0:0:0,-35.2205,-415.931 dDocent_Contig_258 106 . N T 98.2707 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=2X1I1X;DP=3;DPB=4;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=101;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:2:0,2:0:0:2:66:-6.11995,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:1:0,1:0:0:1:35:-3.3807,-0.30103,0 .:.:.:.:.:.:.:. dDocent_Contig_259 54 . T A 816.911 . AB=0.251656;ABP=83.9012;AC=4;AF=0.333333;AN=12;AO=42;CIGAR=1X;DP=224;DPB=224;DPRA=0;EPP=94.2121;EPPR=398.218;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.452381;PAIREDR=0.521978;PAO=0;PQA=0;PQR=0;PRO=0;QA=1581;QR=7107;RO=182;RPL=42;RPP=94.2121;RPPR=398.218;RPR=0;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=182;SRP=398.218;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:27:18,9:18:703:9:331:-22.0045,0,-55.466 0/1:50:32,18:32:1256:18:680:-46.474,0,-98.26 0/1:40:33,7:33:1313:7:253:-11.0692,0,-106.396 0/1:34:30,4:30:1159:4:160:-4.54878,0,-94.363 0/0:24:23,1:23:874:1:40:0,-3.22904,-74.9727 0/0:49:46,3:46:1802:3:117:0,-3.84077,-151.495 dDocent_Contig_260 12 . C T 2840.65 . AB=0.441558;ABP=9.86313;AC=2;AF=0.166667;AN=12;AO=102;CIGAR=1X;DP=744;DPB=744;DPRA=0.900585;EPP=224.5;EPPR=1388.41;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.987461;PAO=0;PQA=0;PQR=0;PRO=0;QA=3934;QR=25425;RO=638;RPL=0;RPP=224.5;RPPR=1388.41;RPR=102;RUN=1;SAF=102;SAP=224.5;SAR=0;SRF=638;SRP=1388.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:115:114,0:114:4545:0:0:0,-34.3174,-408.58 0/0:173:172,0:172:6815:0:0:0,-51.7772,-612.963 0/0:64:64,0:64:2574:0:0:0,-19.2659,-231.787 0/0:161:160,0:160:6386:0:0:0,-48.1648,-574.117 0/1:139:64,74:64:2550:74:2846:-214.356,0,-187.678 0/1:92:64,28:64:2555:28:1088:-70.5225,0,-202.384 dDocent_Contig_261 8 . T G 524.004 . AB=0.11487;ABP=1640.48;AC=4;AF=0.333333;AN=12;AO=182;CIGAR=1X;DP=1847;DPB=1847;DPRA=0;EPP=398.218;EPPR=3499.72;GTI=0;LEN=1;MEANALT=2;MQM=47.022;MQMR=45.7491;NS=6;NUMALT=1;ODDS=0;PAIRED=0.983516;PAIREDR=0.757557;PAO=0;PQA=0;PQR=0;PRO=0;QA=6966;QR=63415;RO=1654;RPL=0;RPP=398.218;RPPR=3594.63;RPR=182;RUN=1;SAF=182;SAP=398.218;SAR=0;SRF=1643;SRP=3499.72;SRR=11;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:325:308,15:308:11815:15:581:0,-54.012,-895.501 0/1:401:352,46:352:13413:46:1739:-19.8237,0,-918.082 0/1:256:229,27:229:8787:27:1033:-1.96483,0,-584.308 0/1:289:245,40:245:9422:40:1538:-25.0897,0,-658.199 0/1:325:290,33:290:11157:33:1265:-7.92261,0,-765.172 0/0:251:230,21:230:8821:21:810:0,-15.1019,-620.918 dDocent_Contig_262 8 . T G 2841.57 . AB=0.0440141;ABP=1028.82;AC=3;AF=0.25;AN=12;AO=25;CIGAR=1X14M;DP=568;DPB=566.667;DPRA=0;EPP=57.2971;EPPR=198.443;GTI=0;LEN=1;MEANALT=20.5;MQM=60;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0.333333;PQA=12.6667;PQR=12.6667;PRO=0.333333;QA=954;QR=3564;RO=90;RPL=0;RPP=57.2971;RPPR=198.443;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=90;SRP=198.443;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:95:13,2,1,7,12,2,5,15,0,5:13:510:2,1,7,12,2,5,15,0,5:80,38,255,455,66,184,594,0,189:-44.9726,-42.2952,-83.6383,-45.7694,-81.1239,-87.4134,-28.0614,-63.4158,-66.8899,-67.8992,-11.5795,-46.9342,-50.4084,-32.7005,-49.9125,-43.5532,-78.9075,-82.3816,-64.6737,-48.1922,-84.8961,-33.8428,-69.1973,-72.6714,-54.9634,-38.4819,-70.4551,-74.2827,0,-35.3553,-38.8295,-21.1214,-4.63942,-36.6133,-26.9029,-37.4306,-48.886,-84.2404,-87.7145,-70.0064,-53.5249,-85.4981,-75.7879,-41.9461,-90.831,-33.3935,-68.748,-72.2222,-54.5142,-38.0326,-70.0059,-60.2956,-26.4536,-75.3387,-73.8335 0|0:141:27,3,6,7,15,10,23,22,0,3:27:1073:3,6,7,15,10,23,22,0,3:120,226,269,573,387,863,876,0,117:-64.0102,-62.2521,-149.698,-53.6184,-132.082,-140.161,-50.0532,-128.517,-119.883,-136.295,-25.122,-103.586,-94.9523,-91.3873,-108.956,-40.3498,-118.813,-110.18,-106.615,-81.6841,-125.689,-1.44848,-79.9129,-71.2793,-67.7142,-42.7834,-58.011,-82.875,0,-78.4653,-69.8316,-66.2665,-41.3354,-56.5631,-17.662,-81.7285,-72.138,-150.601,-141.967,-138.402,-113.472,-128.699,-89.7987,-88.3511,-160.487,-62.5197,-140.983,-132.349,-128.784,-103.854,-119.081,-80.1805,-78.7329,-150.869,-149.965 0|1:85:11,1,11,2,5,4,8,8,0,7:11:432:1,11,2,5,4,8,8,0,7:41,423,75,165,163,298,308,0,267:-31.4183,-31.3451,-66.5778,0,-32.1498,-32.223,-28.5865,-60.7358,-29.3912,-63.5182,-21.3988,-53.5478,-22.2036,-50.7893,-55.4271,-21.2804,-53.4299,-22.0851,-50.6713,-43.4834,-55.6103,-10.3701,-42.5195,-11.1749,-39.761,-32.5733,-32.4549,-43.4958,-9.44154,-41.5911,-10.2463,-38.8326,-31.6448,-31.5265,-20.6163,-42.5674,-34.7297,-66.8788,-35.5344,-64.1203,-56.9323,-56.8144,-45.904,-44.9757,-70.2633,-12.8245,-44.974,-13.6293,-42.2154,-35.0277,-34.9094,-23.9991,-23.0707,-48.3585,-46.2513 0|1:80:7,1,7,3,4,14,13,11,4,3:7:278:1,7,3,4,14,13,11,4,3:39,271,115,154,550,497,435,158,117:-61.0245,-59.9257,-82.5132,-40.8687,-60.5514,-61.6501,-53.6928,-73.3754,-54.3185,-75.6783,-50.4868,-70.1694,-51.1126,-63.9366,-72.1713,-17.8936,-37.5767,-18.5195,-31.3438,-28.1378,-36.5683,-22.3492,-42.032,-22.9751,-35.7992,-32.5932,0,-41.3246,-27.3326,-47.0155,-27.9584,-40.7827,-37.5766,-4.98312,-9.43891,-46.9102,-50.1293,-69.812,-50.7551,-63.5792,-60.3732,-27.7802,-32.2357,-37.2191,-71.8139,-53.5137,-73.1963,-54.1394,-66.9635,-63.7575,-31.1646,-35.62,-40.6035,-63.4001,-75.4992 0|0:79:14,1,5,0,4,1,8,14,3,5:14:556:1,5,0,4,1,8,14,3,5:38,191,0,149,41,305,557,123,186:-41.6504,-42.7483,-88.2249,-30.1932,-72.8546,-74.4659,-45.8649,-88.5259,-75.9711,-91.6424,-33.6687,-76.3299,-63.775,-79.4464,-78.2422,-42.4803,-85.1414,-72.5866,-88.258,-76.0619,-87.9569,-20.848,-63.5095,-50.9546,-66.626,-54.43,-63.2415,-64.2178,0,-42.6628,-30.1077,-45.7793,-33.5832,-42.3948,-20.7624,-41.5649,-35.7111,-78.3725,-65.8176,-81.489,-69.293,-78.1046,-56.4725,-35.6256,-80.586,-30.6432,-73.3044,-60.7496,-76.4209,-64.2249,-73.0364,-51.4045,-30.5576,-66.2675,-74.9157 0|1:88:18,5,2,4,7,11,16,10,0,2:18:715:5,2,4,7,11,16,10,0,2:200,74,154,258,417,615,399,0,78:-45.0758,-34.0169,-91.3839,-44.4406,-86.8354,-102.71,-37.8486,-80.2437,-90.6668,-95.5162,-29.3966,-71.7917,-82.2148,-75.6231,-86.1612,-16.3078,-58.7035,-69.1268,-62.5351,-54.0832,-71.8691,0,-42.3966,-52.8201,-46.2282,-37.7763,-24.6879,-54.0572,-17.6305,-60.0267,-70.45,-63.8582,-55.4062,-42.3179,-26.0106,-73.4933,-50.4943,-92.889,-103.312,-96.7204,-88.2684,-75.1804,-58.8737,-76.5036,-109.366,-44.0819,-86.4768,-96.8999,-90.3082,-81.8562,-68.7682,-52.4614,-70.0914,-102.953,-102.351 dDocent_Contig_263 8 . T G 3455.22 . AB=0.0499109;ABP=990.14;AC=1;AF=0.0833333;AN=12;AO=28;CIGAR=1M1X13M;DP=653;DPB=660.533;DPRA=0;EPP=63.8115;EPPR=235.358;GTI=0;LEN=1;MEANALT=19.6;MQM=60;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=0.607143;PAIREDR=0.719626;PAO=0.825;PQA=8;PQR=8;PRO=0.825;QA=1079;QR=4210;RO=107;RPL=0;RPP=63.8115;RPPR=235.358;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=107;SRP=235.358;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:92:15,4,10,4,0,1,14,14,11,0:15:593:4,10,4,0,1,14,14,11,0:114,374,116,0,39,549,565,433,0:-42.0672,-38.6147,-86.2153,-16.0483,-56.8865,-61.8443,-37.8986,-78.7352,-56.1705,-85.4994,-46.5826,-87.4194,-64.8546,-86.7036,-95.3883,-43.3887,-84.2256,-61.6607,-83.5097,-92.1944,-91.8933,-1.45285,-42.2922,-19.7261,-41.5762,-50.2602,-47.0663,-46.0458,0,-40.8398,-18.2734,-40.1237,-48.8079,-45.6139,-3.6779,-44.5934,-10.9612,-51.7999,-29.2341,-51.0839,-59.7681,-56.5742,-14.639,-13.1863,-56.4568,-46.5826,-87.4194,-64.8546,-86.7036,-95.3883,-92.1944,-50.2602,-48.8079,-59.7681,-95.3883 0|0:140:26,11,23,14,0,2,14,22,1,2:26:1026:11,23,14,0,2,14,22,1,2:385,863,480,0,76,534,878,41,77:-64.493,-41.6224,-122.741,-1.67182,-55.407,-79.1802,-34.2023,-87.9354,-47.9871,-114.417,-72.3198,-126.052,-86.1039,-118.632,-156.749,-66.0985,-119.831,-79.8827,-112.411,-150.528,-149.926,-28.6176,-82.3515,-42.4025,-74.9315,-113.048,-106.827,-108.834,0,-53.7358,-13.7857,-46.3158,-84.4332,-78.2119,-40.7313,-77.8105,-68.9352,-122.667,-82.7194,-115.247,-153.364,-147.143,-109.664,-81.0486,-153.063,-65.9967,-119.729,-79.781,-112.309,-150.426,-144.205,-106.725,-78.1102,-147.041,-149.824 1|0:94:13,0,11,24,0,6,2,14,0,7:13:509:0,11,24,0,6,2,14,0,7:0,416,707,0,227,81,565,0,268:-54.4797,-58.393,-100.253,-24.3037,-66.1658,-62.8545,-4.70684,-46.565,-12.48,-39.3402,-58.393,-100.253,-66.1658,-46.565,-100.253,-39.844,-81.7053,-47.6171,-28.0182,-81.7053,-79.8991,-51.7123,-93.573,-59.4852,-39.8848,-93.573,-75.0248,-92.971,-11.8232,-53.6869,-19.597,0,-53.6869,-35.1376,-47.0061,-49.4725,-58.393,-100.253,-66.1658,-46.565,-100.253,-81.7053,-93.573,-53.6869,-100.253,-36.3959,-78.2574,-44.169,-24.5704,-78.2574,-59.7089,-71.5768,-31.6894,-78.2574,-76.1502 0|0:139:31,3,12,10,0,1,11,29,4,15:31:1217:3,12,10,0,1,11,29,4,15:73,464,316,0,39,446,1166,163,578:-86.7305,-91.2092,-190.406,-58.0342,-153.283,-154.524,-71.8318,-167.078,-133.905,-168.921,-96.0624,-191.309,-158.136,-171.932,-196.163,-92.8563,-188.103,-154.93,-168.726,-192.957,-192.656,-59.346,-154.595,-121.421,-135.217,-159.448,-156.242,-156.137,0,-95.2535,-62.0785,-75.8759,-100.107,-96.9007,-63.3903,-91.377,-82.6133,-177.861,-144.688,-158.483,-182.715,-179.508,-146,-86.6577,-181.51,-48.596,-143.845,-110.671,-124.467,-148.698,-145.492,-111.983,-52.6402,-135.25,-144.183 0|0:71:8,1,5,10,4,6,1,16,5,1:8:317:1,5,10,4,6,1,16,5,1:39,195,199,64,234,41,635,204,39:-49.8862,-49.0905,-74.8911,-36.2592,-59.1581,-60.8567,-39.8023,-62.698,-49.869,-62.891,-48.8155,-71.7122,-58.8826,-62.4252,-73.7116,-33.0764,-55.9756,-43.1446,-46.6868,-55.7002,-57.3732,-49.1754,-72.0733,-59.243,-62.7829,-71.7971,-56.0605,-74.976,0,-22.9032,-10.0702,-13.6179,-22.6297,-6.88696,-22.9881,-21.291,-35.4556,-58.3547,-45.5238,-49.0654,-58.0791,-42.3411,-58.4396,-9.26642,-60.0534,-49.0874,-71.9853,-59.155,-62.6949,-71.7092,-55.9725,-72.0702,-22.9001,-58.3516,-74.888 0|0:117:14,14,8,10,0,4,11,17,3,3:14:548:14,8,10,0,4,11,17,3,3:497,308,347,0,155,432,681,122,117:-51.8584,-16.9456,-57.791,-30.8243,-36.7574,-73.4765,-28.4378,-34.371,-48.2496,-70.4874,-56.0729,-62.0054,-75.8847,-73.4977,-101.133,-43.3381,-49.2709,-63.1501,-60.7632,-88.3984,-87.1942,-20.6045,-26.5378,-40.4167,-38.0301,-65.6652,-52.9304,-62.3538,0,-5.93379,-19.8125,-17.4261,-45.0613,-32.3264,-9.59259,-39.9438,-46.0086,-51.9413,-65.8206,-63.4336,-91.0689,-78.3342,-55.6009,-34.9969,-90.1658,-46.4547,-52.3874,-66.2666,-63.8797,-91.5149,-78.7803,-56.047,-35.443,-81.4508,-90.6118 dDocent_Contig_264 9 . A T 1128.5 . AB=0.017094;ABP=239.998;AC=0;AF=0;AN=12;AO=2;CIGAR=1M2X1M;DP=654;DPB=965.25;DPRA=0;EPP=7.35324;EPPR=984.516;GTI=0;LEN=1;MEANALT=10;MQM=33;MQMR=55.1062;NS=6;NUMALT=7;ODDS=0;PAIRED=1;PAIREDR=0.997788;PAO=0;PQA=0;PQR=0;PRO=0;QA=75;QR=17246;RO=452;RPL=0;RPP=7.35324;RPPR=984.516;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=452;SRP=984.516;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:88:65,0,0,0,5,16,0,0:65:2478:0,0,0,5,16,0,0:0,0,0,199,632,0,0:-21.8207,-41.3876,-242.646,-41.3876,-242.646,-242.646,-41.3876,-242.646,-242.646,-242.646,-28.413,-229.675,-229.675,-229.675,-228.17,0,-201.279,-201.279,-201.279,-188.31,-196.462,-41.3876,-242.646,-242.646,-242.646,-229.675,-201.279,-242.646,-41.3876,-242.646,-242.646,-242.646,-229.675,-201.279,-242.646,-242.646 0|0:117:81,0,0,0,16,5,1,2:81:3095:0,0,0,16,5,1,2:0,0,0,617,195,38,75:-16.4498,-40.8333,-293.703,-40.8333,-293.703,-293.703,-40.8333,-293.703,-293.703,-293.703,0,-252.873,-252.873,-252.873,-248.056,-27.9642,-280.835,-280.835,-280.835,-240.006,-279.33,-38.2718,-291.141,-291.141,-291.141,-250.312,-278.274,-290.84,-35.7339,-288.604,-288.604,-288.604,-247.774,-275.736,-286.042,-288.002 0|0:98:79,0,0,2,4,11,0,0:79:3007:0,0,2,4,11,0,0:0,0,79,159,436,0,0:-5.87079,-29.6522,-266.364,-29.6522,-266.364,-266.364,-24.4745,-261.185,-261.185,-260.583,-19.2807,-255.99,-255.99,-250.812,-254.786,0,-236.712,-236.712,-231.533,-226.339,-233.4,-29.6522,-266.364,-266.364,-261.185,-255.99,-236.712,-266.364,-29.6522,-266.364,-266.364,-261.185,-255.99,-236.712,-266.364,-266.364 0|0:116:78,3,0,0,23,7,0,0:78:2980:3,0,0,23,7,0,0:113,0,0,891,276,0,0:-35.5949,-52.3664,-284.875,-59.0753,-285.778,-292.488,-59.0753,-285.778,-292.488,-292.488,0,-226.714,-233.423,-233.423,-226.5,-40.955,-267.661,-274.371,-274.371,-215.307,-272.264,-59.0753,-285.778,-292.488,-292.488,-233.423,-274.371,-292.488,-59.0753,-285.778,-292.488,-292.488,-233.423,-274.371,-292.488,-292.488 0|0:97:56,2,0,0,8,19,0,0:56:2163:2,0,0,8,19,0,0:79,0,0,310,729,0,0:-31.6214,-44.2669,-211.863,-48.479,-212.465,-216.678,-48.479,-212.465,-216.678,-216.678,-27.9213,-191.909,-196.122,-196.122,-193.714,0,-163.988,-168.201,-168.201,-147.646,-162.481,-48.479,-212.465,-216.678,-216.678,-196.122,-168.201,-216.678,-48.479,-212.465,-216.678,-216.678,-196.122,-168.201,-216.678,-216.678 0|0:138:93,3,2,0,11,13,5,0:93:3523:3,2,0,11,13,5,0:119,80,0,397,509,194,0:-5.48907,-27.1615,-308.798,-28.2875,-304.505,-310.227,-33.4849,-309.701,-310.829,-316.024,-6.32457,-282.55,-283.678,-288.873,-285.562,0,-276.231,-277.359,-282.554,-255.404,-278.641,-20.6491,-296.87,-297.997,-303.193,-276.042,-269.723,-301.688,-33.4849,-309.701,-310.829,-316.024,-288.873,-282.554,-303.193,-316.024 dDocent_Contig_267 7 . T C 3131.1 . AB=0.0335917;ABP=734.247;AC=0;AF=0;AN=12;AO=13;CIGAR=1X2M1X;DP=454;DPB=458;DPRA=0;EPP=23.2217;EPPR=350.653;GTI=0;LEN=1;MEANALT=7.2;MQM=53.1538;MQMR=58.4107;NS=6;NUMALT=4;ODDS=0;PAIRED=0.846154;PAIREDR=0.97619;PAO=0;PQA=0;PQR=0;PRO=0;QA=505;QR=6458;RO=168;RPL=0;RPP=31.2394;RPPR=367.818;RPR=13;RUN=1;SAF=12;SAP=23.2217;SAR=1;SRF=166;SRP=350.653;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:91:29,5,7,23,22:29:1121:5,7,23,22:193,262,890,890:-64.6658,-57.5441,-144.515,-52.0465,-124.67,-138.415,-6.70684,-79.3261,-73.8287,-88.2536,0,-72.6297,-67.1316,-21.7863,-81.8593 0|0:92:27,3,19,23,11:27:1032:3,19,23,11:117,730,832,443:-58.642,-57.1516,-140.929,-7.1933,-82.2565,-86.1551,0,-75.0585,-25.1033,-77.7526,-30.2536,-105.318,-55.3592,-48.1621,-111.624 0|0:63:20,1,9,13,9:20:775:1,9,13,9:39,328,505,365:-35.4419,-38.2563,-91.8932,-14.8165,-65.545,-66.0422,0,-50.7308,-27.2865,-50.024,-11.3538,-62.0864,-38.6422,-23.8259,-62.5837 0|0:67:27,0,4,24,9:27:1037:0,4,24,9:0,156,909,367:-65.3701,-73.4979,-158.629,-60.7563,-145.888,-144.684,0,-85.1318,-72.3909,-77.9071,-43.2098,-128.346,-115.604,-54.8461,-125.636 0|0:63:36,2,7,11,3:36:1383:2,7,11,3:79,267,428,122:-24.3092,-32.9855,-145.914,-13.3711,-124.745,-124.808,0,-111.382,-91.7786,-110.24,-25.0785,-136.452,-116.85,-103.486,-137.719 0|0:78:29,2,5,25,16:29:1110:2,5,25,16:77,182,945,643:-68.6782,-71.0855,-161.573,-62.6112,-147.378,-152.195,0,-84.7649,-76.2906,-83.5616,-24.4139,-109.185,-100.71,-38.0952,-110.692 dDocent_Contig_268 10 . C T 4208.79 . AB=0.484642;ABP=3.6106;AC=6;AF=0.5;AN=12;AO=142;CIGAR=1M1X;DP=293;DPB=293;DPRA=0;EPP=311.359;EPPR=330.903;GTI=0;LEN=1;MEANALT=1;MQM=59.6197;MQMR=59.9404;NS=6;NUMALT=1;ODDS=0;PAIRED=0.992958;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5716;QR=5909;RO=151;RPL=0;RPP=311.359;RPPR=330.903;RPR=142;RUN=1;SAF=142;SAP=311.359;SAR=0;SRF=151;SRP=330.903;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:50:27,23:27:1061:23:925:-68.5029,0,-80.7388 0|1:54:29,25:29:1133:25:998:-73.8613,0,-86.0085 0|1:43:20,23:20:798:23:922:-70.3378,0,-59.1981 0|1:37:20,17:20:772:17:688:-47.9458,0,-58.6649 0|1:50:27,23:27:1067:23:936:-69.4887,0,-81.2561 0|1:59:28,31:28:1078:31:1247:-94.7396,0,-79.5554 dDocent_Contig_269 7 . T C 7843.49 . AB=0.0252874;ABP=854.472;AC=0;AF=0;AN=12;AO=11;CIGAR=1X2M1X;DP=641;DPB=641;DPRA=0;EPP=26.8965;EPPR=747.825;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=411;QR=13208;RO=343;RPL=0;RPP=26.8965;RPPR=747.825;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=343;SRP=747.825;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:87:52,2,31:52:2002:2,31:66,1257:-88.1391,-98.4609,-262.234,0,-159.166,-155.168 0|0:162:90,0,67:90:3457:0,67:0,2709:-196.389,-223.482,-507.263,0,-283.906,-263.737 0|0:100:50,6,43:50:1936:6,43:228,1734:-127.899,-124.256,-281.484,0,-140.355,-146.108 0|0:154:78,1,69:78:2994:1,69:39,2751:-203.067,-223.341,-468.79,0,-242.552,-224.987 0|0:44:23,0,21:23:890:0,21:0,852:-63.7451,-70.6688,-143.768,0,-73.4952,-67.1736 0|0:94:50,2,37:50:1929:2,37:78,1504:-109.107,-117.747,-275.56,0,-152.097,-147.371 dDocent_Contig_270 8 . T G 3597.78 . AB=0.077147;ABP=1069.97;AC=1;AF=0.0833333;AN=12;AO=53;CIGAR=1M2X5M1X2M2X1M1X;DP=687;DPB=647.2;DPRA=0;EPP=118.098;EPPR=226.753;GTI=0;LEN=1;MEANALT=23;MQM=57;MQMR=59.1495;NS=6;NUMALT=7;ODDS=0;PAIRED=1;PAIREDR=0.981308;PAO=0;PQA=0;PQR=0;PRO=0.833333;QA=1998;QR=4174;RO=107;RPL=0;RPP=118.098;RPPR=235.358;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=106;SRP=226.753;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:114:15,1,3,9,8,22,13,10:15:579:1,3,9,8,22,13,10:39,117,328,304,726,528,403:-48.2266,-49.5359,-96.7866,-43.1683,-87.514,-89.817,-25.9501,-70.296,-63.9285,-70.7929,-27.8287,-72.1747,-65.8071,-48.5891,-72.9726,0,-44.3437,-37.9764,-20.7597,-22.6379,-40.927,-9.18763,-53.5346,-47.1669,-29.9486,-31.8272,-3.99766,-52.8274,-19.5202,-63.8667,-57.4991,-40.2809,-42.1595,-14.3297,-23.5188,-64.0626 1|0:137:9,4,9,21,9,18,17,9:9:351:4,9,21,9,18,17,9:155,351,798,344,601,682,362:-90.0815,-80.0559,-107.704,-64.0168,-80.1347,-90.1604,-27.3451,-43.4632,-27.424,-49.8766,-64.586,-80.7039,-64.6648,-27.9932,-90.7295,-49.4348,-65.5523,-49.5136,-12.8433,-50.0828,-72.8683,-36.5934,-52.7116,-36.6722,0,-37.2414,-22.0908,-60.3291,-62.955,-79.0729,-63.0338,-26.362,-63.603,-48.4517,-35.6103,-89.0986 0|0:105:28,3,0,11,11,12,18,0:28:1080:3,0,11,11,12,18,0:117,0,411,414,396,733,0:-52.0496,-50.8601,-135.032,-60.4784,-135.936,-145.554,-26.8248,-102.282,-111.9,-108.589,-26.5872,-102.044,-111.663,-78.009,-108.351,-31.7141,-107.167,-116.785,-83.1329,-82.8954,-113.173,0,-75.4601,-85.0786,-51.424,-51.1864,-56.3113,-79.6601,-60.4784,-135.936,-145.554,-111.9,-111.663,-116.785,-85.0786,-145.554 0|0:99:10,11,4,8,5,2,19,15:10:393:11,4,8,5,2,19,15:428,151,288,187,66,769,609:-78.3084,-46.1422,-75.1578,-68.9526,-66.1031,-100.075,-57.8255,-54.976,-77.7861,-87.7439,-66.0168,-63.1672,-85.9775,-74.8503,-96.8384,-76.5243,-73.6747,-96.4848,-85.3577,-93.549,-108.249,-17.9061,-15.0565,-37.8677,-26.7405,-34.9318,-45.4396,-44.5144,-31.0865,-28.2369,-51.0478,-39.9206,-48.1119,-58.6196,0,-58.8986 0|0:112:17,1,3,14,12,6,14,11:17:669:1,3,14,12,6,14,11:37,117,535,455,198,559,439:-40.9268,-43.0173,-97.7545,-36.4352,-88.4466,-90.5705,-2.14371,-54.1558,-47.5737,-52.9683,-8.76461,-60.7764,-54.1944,-19.9034,-60.1911,-31.6602,-83.6708,-77.089,-42.7986,-49.4192,-84.8916,0,-52.0125,-45.4305,-11.139,-17.7599,-40.6552,-50.8251,-9.88652,-61.8987,-55.3167,-21.0254,-27.6462,-50.5413,-18.8819,-61.6144 0|0:120:28,5,3,15,8,9,6,19:28:1102:5,3,15,8,9,6,19:188,108,572,294,297,246,760:-54.1814,-47.2077,-136.364,-53.8447,-129.103,-143.602,-15.6852,-90.9448,-97.5816,-101.832,-38.5913,-113.85,-120.487,-82.3284,-126.844,-41.0348,-116.292,-122.929,-84.7709,-107.676,-128.985,-42.3032,-117.562,-124.199,-86.0406,-108.946,-111.388,-131.159,0,-75.2611,-81.8981,-43.7389,-66.6446,-69.0875,-70.3568,-84.9441 dDocent_Contig_271 8 . T G 2049.77 . AB=0.0663812;ABP=765.699;AC=1;AF=0.0833333;AN=12;AO=31;CIGAR=1M2X5M1X2M2X1M1X;DP=467;DPB=419.333;DPRA=0;EPP=70.3259;EPPR=181.071;GTI=0;LEN=1;MEANALT=16.8333;MQM=57;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0.125;QA=1159;QR=3175;RO=82;RPL=0;RPP=70.3259;RPPR=181.071;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=82;SRP=181.071;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:62:19,2,0,3,0,2,11,6,0,8:19:721:2,0,3,0,2,11,6,0,8:73,0,117,0,66,363,246,0,325:-21.0967,-20.8517,-79.3705,-26.8163,-79.9726,-85.9368,-17.1963,-70.3537,-76.318,-75.4149,-26.8163,-79.9726,-85.9368,-76.318,-85.9368,-21.4851,-74.6413,-80.6055,-70.9866,-80.6055,-80.0034,-0.457133,-53.6078,-59.5714,-49.9531,-59.5714,-54.2409,-56.2601,-6.50364,-59.6632,-65.6276,-56.0084,-65.6276,-60.2962,-39.2629,-63.8215,-26.8163,-79.9726,-85.9368,-76.318,-85.9368,-80.6055,-59.5714,-65.6276,-85.9368,0,-53.1608,-59.1252,-49.5058,-59.1252,-53.7938,-32.7609,-38.8145,-59.1252,-56.717 1|0:69:8,3,2,10,0,9,14,6,4,1:8:318:3,2,10,0,9,14,6,4,1:117,74,387,0,344,462,231,160,38:-36.7536,-29.5428,-54.8263,-33.1117,-49.6793,-58.6959,-7.36665,-23.9351,-27.504,-30.5438,-39.1618,-55.7294,-59.298,-33.5541,-65.348,-10.9565,-27.5248,-31.0936,-5.34878,-37.1437,-34.4344,-5.60667,-22.1732,-25.7417,0,-31.7911,-3.58948,-27.5767,-20.2003,-36.7683,-40.337,-14.5926,-46.3871,-18.1823,-12.8319,-44.581,-25.9795,-42.5474,-46.1162,-20.3718,-52.1663,-23.9615,-18.6102,-33.2051,-50.9621,-36.045,-52.6126,-56.1813,-30.4373,-62.2313,-34.0269,-28.6747,-43.2704,-49.0495,-61.9303 0|0:60:12,2,3,9,3,4,12,0,0,5:12:474:2,3,9,3,4,12,0,0,5:76,114,338,117,150,396,0,0,191:-25.1462,-22.5247,-60.9354,-19.4512,-52.2307,-57.5611,-1.06719,-33.8483,-30.7749,-37.3726,-19.1388,-51.9185,-48.8452,-30.4625,-57.2489,-16.4797,-49.2595,-46.1862,-27.8036,-45.8739,-54.2889,0,-32.7766,-29.7036,-11.3235,-29.3912,-26.7328,-35.3971,-28.7585,-61.5375,-58.4642,-40.0818,-58.152,-55.493,-39.0094,-67.7709,-28.7585,-61.5375,-58.4642,-40.0818,-58.152,-55.493,-39.0094,-67.7709,-67.7709,-13.0906,-45.8708,-42.7974,-24.4147,-42.4851,-39.8262,-23.3443,-52.1043,-52.1043,-50.5991 0|0:87:11,9,5,2,3,5,21,9,0,6:11:424:9,5,2,3,5,21,9,0,6:347,190,78,113,186,693,359,0,231:-47.0315,-21.8425,-53.9531,-34.8158,-41.1355,-68.1299,-43.93,-50.2495,-63.2223,-78.1468,-41.0822,-47.4017,-60.3746,-69.4884,-74.998,-35.1299,-41.4495,-54.4224,-63.5363,-60.6885,-68.4438,0,-6.31921,-19.2915,-28.4047,-25.5573,-19.6056,-28.4955,-20.7715,-27.0913,-40.0646,-49.1787,-46.331,-40.3786,-5.24794,-52.8824,-50.3429,-56.6623,-69.635,-78.7488,-75.9011,-69.949,-34.8171,-55.5916,-85.1615,-31.3759,-37.6956,-50.6686,-59.7826,-56.9348,-50.9826,-15.8518,-36.6247,-66.1953,-64.3892 0|0:67:13,2,1,2,2,8,13,8,3,4:13:514:2,1,2,2,8,13,8,3,4:78,39,77,76,298,428,318,121,161:-27.1957,-24.6962,-66.4019,-27.9235,-63.8185,-69.93,-24.7857,-60.6809,-63.9081,-66.4914,-24.8754,-60.7706,-63.9977,-60.8601,-66.581,-6.73301,-42.6291,-45.8563,-42.7186,-42.8083,-46.6334,0,-35.8923,-39.1192,-35.9819,-36.0716,-17.9322,-38.3909,-4.92112,-40.8181,-44.0453,-40.9076,-40.9973,-22.8553,-16.1204,-44.8225,-21.1323,-57.0279,-60.255,-57.1174,-57.2071,-39.0655,-32.3289,-37.2544,-62.5374,-17.8366,-53.7324,-56.9596,-53.822,-53.9116,-35.77,-29.0337,-33.9588,-50.1689,-58.9409 0|0:122:19,5,7,8,2,3,24,11,5,4:19:724:5,7,8,2,3,24,11,5,4:187,269,308,77,115,790,433,167,162:-51.7202,-42.1257,-100.011,-35.4838,-79.5606,-92.7671,-32.1482,-76.225,-69.5833,-89.1306,-51.1167,-95.1931,-88.5514,-85.2159,-109.905,-48.0081,-92.0845,-85.4428,-82.1073,-101.075,-106.495,0,-44.0749,-37.4333,-34.0979,-53.0653,-49.9569,-52.1633,-21.8176,-65.8949,-59.253,-55.9175,-74.8858,-71.7772,-23.7679,-77.8975,-43.9314,-88.0077,-81.366,-78.0305,-96.9984,-93.8899,-45.8807,-67.7004,-101.816,-44.0793,-88.1559,-81.5142,-78.1786,-97.1467,-94.0381,-46.0282,-67.8485,-89.9613,-102.266 dDocent_Contig_272 98 . N A 718.471 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=22;CIGAR=1X;DP=22;DPB=22;DPRA=0;EPP=50.7827;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0.954545;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=771;QR=0;RO=0;RPL=22;RPP=50.7827;RPPR=0;RPR=0;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:37:-3.69783,-0.30103,0 1/1:4:0,4:0:0:4:144:-13.3135,-1.20412,0 1/1:10:0,10:0:0:10:347:-31.5643,-3.0103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:6:0,6:0:0:6:208:-19.059,-1.80618,0 ./.:.:.:.:.:.:.:. dDocent_Contig_273 109 . G A 2869.26 . AB=0.136364;ABP=2858.3;AC=5;AF=0.416667;AN=12;AO=342;CIGAR=1X;DP=3022;DPB=3022;DPRA=0;EPP=745.654;EPPR=5816.04;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999253;PAO=0;PQA=0;PQR=0;PRO=0;QA=11630;QR=91210;RO=2677;RPL=0;RPP=745.654;RPPR=5816.04;RPR=342;RUN=1;SAF=0;SAP=745.654;SAR=342;SRF=0;SRP=5816.04;SRR=2677;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:386:298,87:298:10113:87:2916:-146.445,0,-793.94 0/1:690:617,73:617:20932:73:2485:-16.1962,0,-1675.82 0/1:316:277,39:277:9443:39:1337:-25.504,0,-754.773 0/1:609:526,82:526:17865:82:2774:-66.5316,0,-1424.23 0/0:536:532,3:532:18177:3:105:0,-151.605,-1625.88 0/1:485:427,58:427:14680:58:2013:-35.4497,0,-1175.06 dDocent_Contig_274 20 . T G 1703.01 . AB=0.14631;ABP=857.056;AC=3;AF=0.25;AN=12;AO=117;CIGAR=1X;DP=1001;DPB=1001;DPRA=3.35;EPP=257.073;EPPR=1922.59;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.974359;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4611;QR=35204;RO=884;RPL=0;RPP=257.073;RPPR=1922.59;RPR=117;RUN=1;SAF=117;SAP=257.073;SAR=0;SRF=884;SRP=1922.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:48,0:48:1934:0:0:0,-14.4494,-174.256 0/0:85:83,2:83:3335:2:80:0,-17.9958,-292.608 0/0:82:82,0:82:3290:0:0:0,-24.6845,-296.147 0/1:137:123,14:123:4826:14:540:-7.69383,0,-393.014 0/1:346:297,49:297:11760:49:1934:-70.109,0,-953.43 0/1:303:251,52:251:10059:52:2057:-94.1074,0,-813.427 dDocent_Contig_275 98 . N T 1496.14 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=55;CIGAR=1X;DP=55;DPB=55;DPRA=0;EPP=113.913;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=39.2;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1701;QR=0;RO=0;RPL=55;RPP=122.441;RPPR=0;RPR=0;RUN=1;SAF=54;SAP=113.913;SAR=1;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:56:-5.25831,-0.60206,0 1/1:10:0,10:0:0:10:313:-27.2954,-3.0103,0 1/1:8:0,8:0:0:8:254:-22.6847,-2.40824,0 1/1:28:0,28:0:0:28:888:-76.4009,-8.42884,0 1/1:2:0,2:0:0:2:26:-2.46661,-0.60206,0 1/1:5:0,5:0:0:5:164:-14.7239,-1.50515,0 dDocent_Contig_278 11 . C A 4004.84 . AB=0.292111;ABP=179.066;AC=4;AF=0.333333;AN=12;AO=137;CIGAR=2X1M1X;DP=469;DPB=469;DPRA=0;EPP=300.502;EPPR=478.563;GTI=0;LEN=1;MEANALT=4.16667;MQM=59.2044;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0.607306;PAO=0;PQA=0;PQR=0;PRO=0;QA=5366;QR=8636;RO=219;RPL=0;RPP=300.502;RPPR=478.563;RPR=137;RUN=1;SAF=137;SAP=300.502;SAR=0;SRF=219;SRP=478.563;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:87:34,3,30,16:34:1326:3,30,16:118,1188,635:-87.4997,-90.4343,-198.516,0,-101.689,-99.9592,-45.462,-147.148,-56.7164,-149.633 0|0:92:46,5,19,22:46:1810:5,19,22:202,734,874:-58.1175,-60.3447,-207.729,-11.6989,-148.973,-154.878,0,-137.282,-88.6428,-142.283 0|1:48:17,1,18,12:17:661:1,18,12:40,716,481:-53.7957,-56.4735,-110.482,0,-51.8711,-48.8922,-19.2812,-71.1526,-14.6754,-69.9805 0|1:47:16,4,19,6:16:627:4,19,6:156,736,238:-55.6422,-50.2046,-100.556,0,-41.3138,-45.8469,-40.8641,-82.1681,-31.9719,-90.6183 0|0:102:64,1,15,20:64:2549:1,15,20:40,589,802:-46.8145,-62.7853,-272.375,-17.6837,-224.277,-223.056,0,-206.598,-161.494,-203.873 0|1:93:42,1,36,10:42:1663:1,36,10:35,1403,406:-102.611,-112.407,-248.977,0,-134.019,-126.029,-81.7665,-215.792,-103.38,-215.629 dDocent_Contig_279 167 . N G 155.979 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=161;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:40:-3.99568,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:121:-11.28,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_280 209 . N G 269.222 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=287;QR=0;RO=0;RPL=7;RPP=18.2106;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:123:-11.4648,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:164:-15.1499,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_281 28 . C T 115.825 . AB=0.150943;ABP=59.0998;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=148;DPB=148;DPRA=1.11579;EPP=20.3821;EPPR=307.016;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.875;PAIREDR=0.95;PAO=0;PQA=0;PQR=0;PRO=0;QA=307;QR=5576;RO=140;RPL=0;RPP=20.3821;RPPR=307.016;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=140;SRP=307.016;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:17,3:17:672:3:104:-3.67688,0,-54.7856 0/0:20:20,0:20:811:0:0:0,-6.0206,-73.3056 0/0:8:8,0:8:307:0:0:0,-2.40824,-27.9819 0/1:33:28,5:28:1124:5:203:-8.71907,0,-91.5099 0/0:33:33,0:33:1311:0:0:0,-9.93399,-118.252 0/0:34:34,0:34:1351:0:0:0,-10.235,-121.845 dDocent_Contig_282 57 . T A 331.445 . AB=0.113636;ABP=687.616;AC=1;AF=0.0833333;AN=12;AO=101;CIGAR=1X;DP=2276;DPB=2276;DPRA=1.48012;EPP=222.329;EPPR=4725.96;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3577;QR=76485;RO=2175;RPL=101;RPP=222.329;RPPR=4725.96;RPR=0;RUN=1;SAF=101;SAP=222.329;SAR=0;SRF=2175;SRP=4725.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:328:328,0:328:11422:0:0:0,-98.7378,-1027.84 0/0:361:361,0:361:12666:0:0:0,-108.672,-1139.75 0/0:286:286,0:286:10237:0:0:0,-86.0946,-921.17 0/0:333:333,0:333:11933:0:0:0,-100.243,-1073.74 0/1:528:468,60:468:16203:60:2135:-33.4632,0,-1299 0/0:440:399,41:399:14024:41:1442:0,-2.38691,-1131.83 dDocent_Contig_283 98 . N A 245.531 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=244;QR=0;RO=0;RPL=8;RPP=20.3821;RPPR=0;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:3:0,3:0:0:3:99:-9.23712,-0.90309,0 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 dDocent_Contig_284 82 . A T 471.71 . AB=0.111111;ABP=38.4777;AC=0;AF=0;AN=12;AO=3;CIGAR=3M1X10M;DP=143;DPB=142.929;DPRA=0;EPP=9.52472;EPPR=224.5;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.686275;PAO=0;PQA=0;PQR=0;PRO=0;QA=117;QR=3634;RO=102;RPL=3;RPP=9.52472;RPPR=224.5;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=102;SRP=224.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:16:9,0,0,0,0,7:9:312:0,0,0,0,7:0,0,0,0,243:-17.3924,-20.1016,-45.4604,-20.1016,-45.4604,-45.4604,-20.1016,-45.4604,-45.4604,-45.4604,-20.1016,-45.4604,-45.4604,-45.4604,-45.4604,0,-25.7056,-25.7056,-25.7056,-25.7056,-23.5984 0|0:22:18,0,0,0,0,3:18:638:0,0,0,0,3:0,0,0,0,100:-2.64064,-8.05918,-60.0429,-8.05918,-60.0429,-60.0429,-8.05918,-60.0429,-60.0429,-60.0429,-8.05918,-60.0429,-60.0429,-60.0429,-60.0429,0,-51.9519,-51.9519,-51.9519,-51.9519,-51.0488 0|0:24:20,0,0,0,0,4:20:724:0,0,0,0,4:0,0,0,0,138:-5.53568,-11.5563,-70.6753,-11.5563,-70.6753,-70.6753,-11.5563,-70.6753,-70.6753,-70.6753,-11.5563,-70.6753,-70.6753,-70.6753,-70.6753,0,-59.4667,-59.4667,-59.4667,-59.4667,-58.2626 0|0:33:22,2,0,2,0,7:22:786:2,0,2,0,7:71,0,81,0,241:-12.9298,-13.7678,-77.249,-19.5525,-77.8511,-83.6361,-12.8628,-71.1687,-76.9539,-76.3518,-19.5525,-77.8511,-83.6361,-76.9539,-83.6361,0,-58.2798,-64.0645,-57.3817,-64.0645,-61.9573 0|0:21:13,0,3,0,0,4:13:452:0,3,0,0,4:0,103,0,0,140:-7.50128,-11.4147,-48.1769,-3.04071,-39.8125,-38.9094,-11.4147,-48.1769,-39.8125,-48.1769,-11.4147,-48.1769,-39.8125,-48.1769,-48.1769,0,-36.7835,-28.4184,-36.7835,-36.7835,-35.5793 0|0:27:20,0,0,0,3,4:20:722:0,0,0,3,4:0,0,0,117,138:-5.16521,-11.1858,-70.1098,-11.1858,-70.1098,-70.1098,-11.1858,-70.1098,-70.1098,-70.1098,-1.54899,-60.4886,-60.4886,-60.4886,-59.5856,0,-58.9013,-58.9013,-58.9013,-49.2799,-57.6972 dDocent_Contig_285 1 . N G 392.113 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=12;CIGAR=1X4M;DP=13;DPB=13.4;DPRA=0;EPP=29.068;EPPR=0;GTI=0;LEN=1;MEANALT=1.25;MQM=58;MQMR=0;NS=4;NUMALT=1;ODDS=4.33681e-19;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=415;QR=0;RO=0;RPL=0;RPP=29.068;RPPR=0;RPR=12;RUN=1;SAF=0;SAP=29.068;SAR=12;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:4:0,4:0:0:4:140:-12.942,-1.20412,0 1|1:2:0,2:0:0:2:70:-6.64588,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:4:0,3:0:0:3:104:-9.49489,-0.90309,0 1|1:3:0,3:0:0:3:101:-9.42181,-0.90309,0 dDocent_Contig_286 14 . G A 8358.22 . AB=0.189813;ABP=1922.66;AC=6;AF=0.5;AN=12;AO=436;CIGAR=1X;DP=2297;DPB=2297;DPRA=0;EPP=949.772;EPPR=4041.95;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=17006;QR=72004;RO=1860;RPL=0;RPP=949.772;RPPR=4041.95;RPR=436;RUN=1;SAF=436;SAP=949.772;SAR=0;SRF=1860;SRP=4041.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:308:276,32:276:10697:32:1257:-20.6943,0,-869.521 0/1:447:352,94:352:13599:94:3684:-196.959,0,-1088.51 0/1:357:253,104:253:9753:104:4039:-256.069,0,-769.884 0/1:504:427,77:427:16570:77:2979:-116.533,0,-1338.59 0/1:475:364,111:364:14117:111:4335:-247.165,0,-1126.76 0/1:206:188,18:188:7268:18:712:-2.39752,0,-591.902 dDocent_Contig_291 1 . N G 280.427 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=13;CIGAR=1X;DP=13;DPB=13;DPRA=0;EPP=31.2394;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=23.9231;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=443;QR=0;RO=0;RPL=0;RPP=31.2394;RPPR=0;RPR=13;RUN=1;SAF=0;SAP=31.2394;SAR=13;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:69:-3.21565,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:26:-2.34658,-0.30103,0 1/1:4:0,4:0:0:4:139:-8.45821,-1.20412,0 1/1:6:0,6:0:0:6:209:-13.4055,-1.80618,0 ./.:.:.:.:.:.:.:. dDocent_Contig_295 39 . A C 136.109 . AB=0.352941;ABP=6.20364;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=174;DPB=174;DPRA=0.541401;EPP=16.0391;EPPR=365.646;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=208;QR=6623;RO=167;RPL=0;RPP=16.0391;RPPR=365.646;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=167;SRP=365.646;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:43:43,0:43:1701:0:0:0,-12.9443,-153.322 0/0:38:38,0:38:1498:0:0:0,-11.4391,-135.067 0/0:46:45,0:45:1793:0:0:0,-13.5463,-161.449 0/0:22:22,0:22:881:0:0:0,-6.62266,-79.6001 0/0:8:8,0:8:311:0:0:0,-2.40824,-28.3492 0/1:17:11,6:11:439:6:208:-13.9296,0,-34.7477 dDocent_Contig_296 52 . G A 10196 . AB=0.176263;ABP=3101.77;AC=4;AF=0.333333;AN=12;AO=607;CIGAR=1X;DP=5369;DPB=5369;DPRA=0.941126;EPP=1321.09;EPPR=10328.4;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999369;PAO=0;PQA=0;PQR=0;PRO=0;QA=22975;QR=184791;RO=4755;RPL=607;RPP=1321.09;RPPR=10328.4;RPR=0;RUN=1;SAF=607;SAP=1321.09;SAR=0;SRF=4755;SRP=10328.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:729:609,119:609:23575:119:4468:-182.568,0,-1900.31 0/1:958:764,194:764:29588:194:7463:-383.041,0,-2372.1 0/1:725:574,148:574:22390:148:5547:-281.512,0,-1795.69 0/1:992:851,139:851:32931:139:5257:-174.885,0,-2662.8 0/0:941:941,0:941:36708:0:0:0,-283.269,-3300.53 0/0:1024:1016,7:1016:39599:7:240:0,-286.131,-3538.54 dDocent_Contig_297 7 . T C 30034.4 . AB=0.245994;ABP=1401.79;AC=9;AF=0.75;AN=12;AO=614;CIGAR=1X6M;DP=2496;DPB=2495;DPRA=0;EPP=1327.62;EPPR=1049.66;GTI=0;LEN=1;MEANALT=13.5;MQM=39.8436;MQMR=59.6369;NS=6;NUMALT=3;ODDS=0;PAIRED=0.469055;PAIREDR=0.186722;PAO=0;PQA=0;PQR=0;PRO=0;QA=20262;QR=18709;RO=482;RPL=0;RPP=1336.29;RPPR=1049.66;RPR=614;RUN=1;SAF=613;SAP=1327.62;SAR=1;SRF=482;SRP=1049.66;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:335:47,149,22,89:47:1820:149,22,89:5414,878,2791:-466.037,-60.7876,-165.373,-415.697,-145.736,-558.502,-269.945,0,-354.885,-392.58 1|1:533:101,217,23,147:101:3909:217,23,147:8001,917,4953:-639.192,-53.7249,-309.437,-601.92,-307.084,-916.022,-294.821,0,-548.172,-571.596 0|1:389:104,124,28,113:104:4044:124,28,113:4459,1106,3510:-311.598,0,-294.975,-261.635,-251.034,-585.497,-82.6098,-72.0233,-333.632,-380.881 1|1:455:66,195,42,107:66:2567:195,42,107:7285,1689,3767:-626.301,-81.5793,-233.783,-522.967,-169.281,-721.222,-353.679,0,-441.377,-532.368 0|1:319:68,145,17,68:68:2649:145,17,68:5356,684,2289:-391.363,0,-174.094,-360.302,-166.213,-572.917,-239.042,-44.9682,-405.244,-436.304 0|1:465:96,213,17,90:96:3720:213,17,90:7829,681,2952:-572.949,0,-241.362,-552.151,-255.784,-852.503,-376.53,-80.176,-632.302,-654.906 dDocent_Contig_298 98 . N A 424.614 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=14;CIGAR=2X;DP=14;DPB=73;DPRA=0;EPP=33.4109;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=42;PQA=1342;PQR=0;PRO=0;QA=465;QR=0;RO=0;RPL=14;RPP=33.4109;RPPR=0;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:3:0,3:0:0:3:88:-7.91024,-0.90309,0 1|1:6:0,6:0:0:6:206:-18.539,-1.80618,0 1|1:2:0,2:0:0:2:69:-6.21778,-0.60206,0 1|1:3:0,3:0:0:3:102:-9.18343,-0.90309,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_300 20 . G C 497.269 . AB=0.28169;ABP=32.4016;AC=1;AF=0.0833333;AN=12;AO=23;CIGAR=1X;DP=545;DPB=545;DPRA=0.773537;EPP=52.9542;EPPR=1136.52;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9847;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.980843;PAO=0;PQA=0;PQR=0;PRO=0;QA=907;QR=20831;RO=522;RPL=0;RPP=52.9542;RPPR=1136.52;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=522;SRP=1136.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:80:80,0:80:3177:0:0:0,-24.0824,-285.993 0/0:90:90,0:90:3619:0:0:0,-27.0927,-325.7 0/0:77:77,0:77:3097:0:0:0,-23.1793,-278.801 0/0:146:146,0:146:5838:0:0:0,-43.9504,-525.206 0/0:81:78,3:78:3087:3:117:0,-13.4741,-267.004 0/1:71:51,20:51:2013:20:790:-50.0456,0,-159.994 dDocent_Contig_301 98 . N G 8944.09 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=298;CIGAR=1X;DP=299;DPB=299;DPRA=0;EPP=650.109;EPPR=0;GTI=0;LEN=1;MEANALT=1.2;MQM=59.9765;MQMR=0;NS=5;NUMALT=1;ODDS=4.33681e-19;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=9917;QR=0;RO=0;RPL=298;RPP=650.109;RPPR=0;RPR=0;RUN=1;SAF=298;SAP=650.109;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:15:0,15:0:0:15:494:-44.7756,-4.51545,0 1/1:13:0,12:0:0:12:393:-35.5227,-3.61236,0 ./.:.:.:.:.:.:.:. 1/1:71:0,71:0:0:71:2256:-203.294,-21.3731,0 1/1:70:0,70:0:0:70:2358:-212.48,-21.0721,0 1/1:130:0,130:0:0:130:4416:-397.637,-39.1339,0 dDocent_Contig_302 10 . C T 6386.07 . AB=0.265201;ABP=373.169;AC=1;AF=0.0833333;AN=12;AO=205;CIGAR=2X3M1X;DP=773;DPB=773;DPRA=0;EPP=448.162;EPPR=665.309;GTI=0;LEN=1;MEANALT=4.33333;MQM=47.0829;MQMR=59.6131;NS=6;NUMALT=2;ODDS=0;PAIRED=0.82439;PAIREDR=0.911475;PAO=0;PQA=0;PQR=0;PRO=0;QA=7976;QR=11945;RO=305;RPL=0;RPP=448.162;RPPR=665.309;RPR=205;RUN=1;SAF=205;SAP=448.162;SAR=0;SRF=305;SRP=665.309;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:71:32,10,28:32:1262:10,28:397,1048:-76.1271,-53.1795,-154.016,0,-71.2674,-95.4139 0|0:96:33,27,28:33:1292:27,28:1060,1076:-78.1639,-13.7075,-111.802,0,-31.8505,-97.8098 0|0:112:42,34,31:42:1651:34,31:1315,1151:-81.4247,-6.61188,-128.478,0,-44.6713,-122.791 0|0:104:38,32,32:38:1481:32,32:1250,1209:-87.6391,-9.17801,-121.266,0,-31.841,-112.104 0|1:220:95,64,45:95:3732:64,45:2508,1689:-159.843,0,-287.715,-50.2598,-168.81,-343.695 0|0:170:65,38,57:65:2527:38,57:1446,2185:-159.406,-75.4276,-271.642,0,-104.129,-190.516 dDocent_Contig_303 17 . C G 89.8269 . AB=0.097166;ABP=351.158;AC=2;AF=0.166667;AN=12;AO=29;CIGAR=1X;DP=705;DPB=705;DPRA=1.06745;EPP=65.983;EPPR=1466.58;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=59.9199;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997033;PAO=0;PQA=0;PQR=0;PRO=0;QA=1130;QR=27097;RO=674;RPL=0;RPP=65.983;RPPR=1466.58;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=674;SRP=1466.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:117:112,5:112:4520:5:200:0,-16.8415,-388.332 0/1:92:80,11:80:3201:11:408:-9.25077,0,-260.343 0/0:105:105,0:105:4256:0:0:0,-31.6081,-382.97 0/1:155:142,13:142:5700:13:522:-0.666629,0,-466.126 0/0:120:120,0:120:4799:0:0:0,-36.1236,-429.194 0/0:116:115,0:115:4621:0:0:0,-34.6184,-415.383 dDocent_Contig_304 76 . G T 2191.73 . AB=0.13879;ABP=1276.81;AC=5;AF=0.416667;AN=12;AO=170;CIGAR=1X;DP=1436;DPB=1436;DPRA=0;EPP=372.161;EPPR=2745.58;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.988235;PAIREDR=0.997625;PAO=0;PQA=0;PQR=0;PRO=0;QA=6758;QR=49348;RO=1263;RPL=170;RPP=372.161;RPPR=2745.58;RPR=0;RUN=1;SAF=170;SAP=372.161;SAR=0;SRF=1263;SRP=2745.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:159:137,21:137:5296:21:853:-29.4229,0,-428.886 0/1:258:211,47:211:8282:47:1886:-92.2769,0,-667.305 0/1:127:102,25:102:4001:25:997:-51.7974,0,-321.861 0/1:312:283,28:283:10959:28:1066:-2.18611,0,-891.645 0/0:312:298,14:298:11682:14:546:0,-44.4401,-1001.16 0/1:268:232,35:232:9128:35:1410:-46.6879,0,-740.579 dDocent_Contig_305 30 . T A 7620.05 . AB=0.232558;ABP=884.578;AC=3;AF=0.25;AN=12;AO=411;CIGAR=1X;DP=3174;DPB=3174;DPRA=0;EPP=895.485;EPPR=5996.27;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.994928;PAO=0;PQA=0;PQR=0;PRO=0;QA=16456;QR=110078;RO=2760;RPL=0;RPP=895.485;RPPR=5996.27;RPR=411;RUN=1;SAF=411;SAP=895.485;SAR=0;SRF=2760;SRP=5996.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:458:381,77:381:15190:77:3085:-139.858,0,-1228.02 0/0:678:625,53:625:25002:53:2092:0,-15.6435,-2059.5 0/0:420:404,16:404:16102:16:654:0,-67.2408,-1388.66 0/0:657:642,12:642:25635:12:477:0,-153.918,-2261.59 0/1:481:354,127:354:14089:127:5062:-310.666,0,-1122.13 0/1:480:354,126:354:14060:126:5086:-313.091,0,-1119.81 dDocent_Contig_306 51 . A T 794.052 . AB=0.507937;ABP=3.04477;AC=2;AF=0.166667;AN=12;AO=32;CIGAR=1X;DP=140;DPB=140;DPRA=1.63636;EPP=72.4974;EPPR=228.924;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.944444;PAO=0;PQA=0;PQR=0;PRO=0;QA=1095;QR=4158;RO=108;RPL=32;RPP=72.4974;RPPR=237.529;RPR=0;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=107;SRP=228.924;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:378:0:0:0,-3.0103,-34.372 0/0:28:28,0:28:1091:0:0:0,-8.42884,-98.4872 0/0:26:26,0:26:995:0:0:0,-7.82678,-89.8506 0/0:13:13,0:13:494:0:0:0,-3.91339,-44.8049 0/1:25:13,12:13:490:12:437:-32.14,0,-36.9124 0/1:38:18,20:18:710:20:658:-48.0788,0,-52.7911 dDocent_Contig_307 87 . T C 620.011 . AB=0.155172;ABP=362.426;AC=4;AF=0.333333;AN=12;AO=59;CIGAR=1X;DP=458;DPB=458;DPRA=0;EPP=131.127;EPPR=869.428;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.59322;PAIREDR=0.904762;PAO=0;PQA=0;PQR=0;PRO=0;QA=2037;QR=13293;RO=399;RPL=59;RPP=131.127;RPPR=869.428;RPR=0;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=399;SRP=869.428;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:84:72,12:72:2407:12:417:-12.5768,0,-191.611 0/1:77:63,14:63:2086:14:488:-21.0723,0,-164.834 0/0:63:60,3:60:1984:3:104:0,-9.2618,-169.129 0/1:56:44,12:44:1477:12:400:-19.4622,0,-116.365 0/1:131:115,16:115:3864:16:560:-11.2952,0,-308.542 0/0:47:45,2:45:1475:2:68:0,-7.69053,-126.578 dDocent_Contig_308 26 . T C 56.0494 . AB=0.0980392;ABP=146.157;AC=1;AF=0.0833333;AN=12;AO=22;CIGAR=1X;DP=845;DPB=845;DPRA=0.923875;EPP=50.7827;EPPR=1790.13;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=888;QR=32870;RO=823;RPL=0;RPP=50.7827;RPPR=1790.13;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=823;SRP=1790.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:165:153,12:153:6090:12:485:0,-5.66871,-503.866 0/0:198:198,0:198:7931:0:0:0,-59.6039,-713.354 0/0:178:178,0:178:7075:0:0:0,-53.5833,-636.411 0/0:143:143,0:143:5689:0:0:0,-43.0473,-511.821 0/0:59:59,0:59:2380:0:0:0,-17.7608,-214.346 0/1:102:92,10:92:3705:10:403:-5.92369,0,-302.751 dDocent_Contig_309 98 . N G 227.212 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=236;QR=0;RO=0;RPL=7;RPP=18.2106;RPPR=0;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:137:-12.6682,-1.20412,0 1/1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_310 51 . A G 86.399 . AB=0.0993789;ABP=227.454;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=1257;DPB=1257;DPRA=0.732609;EPP=46.4397;EPPR=2689.12;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990299;PAO=0;PQA=0;PQR=0;PRO=0;QA=795;QR=49088;RO=1237;RPL=20;RPP=46.4397;RPPR=2689.12;RPR=0;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=1237;SRP=2689.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:161:145,16:145:5754:16:631:-8.65762,0,-469.227 0/0:250:250,0:250:9925:0:0:0,-75.2575,-892.638 0/0:137:137,0:137:5450:0:0:0,-41.2411,-490.334 0/0:176:172,4:172:6821:4:164:0,-37.8314,-598.456 0/0:279:279,0:279:11070:0:0:0,-83.9874,-995.588 0/0:254:254,0:254:10068:0:0:0,-76.4616,-905.508 dDocent_Contig_311 49 . G A 567.604 . AB=0.231481;ABP=70.6476;AC=4;AF=0.333333;AN=12;AO=25;CIGAR=1X;DP=154;DPB=154;DPRA=1.17391;EPP=57.2971;EPPR=283.13;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1002;QR=5079;RO=129;RPL=0;RPP=57.2971;RPPR=283.13;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=129;SRP=283.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:19,6:19:731:6:236:-14.0855,0,-58.5803 0/1:32:25,7:25:1000:7:281:-16.029,0,-80.663 0/0:24:24,0:24:974:0:0:0,-7.22472,-87.9578 0/1:21:14,7:14:546:7:285:-19.7028,0,-43.1575 0/0:22:22,0:22:884:0:0:0,-6.62266,-79.8705 0/1:30:25,5:25:944:5:200:-9.34843,0,-76.2145 dDocent_Contig_312 21 . G T 637.581 . AB=0.16087;ABP=232.771;AC=3;AF=0.25;AN=12;AO=40;CIGAR=1X;DP=436;DPB=436;DPRA=1.244;EPP=89.8692;EPPR=862.913;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.878788;PAO=0;PQA=0;PQR=0;PRO=0;QA=1606;QR=15811;RO=396;RPL=0;RPP=89.8692;RPPR=862.913;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=396;SRP=862.913;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:63:50,13:50:1983:13:520:-28.1804,0,-159.696 0/1:83:68,15:68:2696:15:604:-29.7131,0,-217.777 0/0:60:60,0:60:2399:0:0:0,-18.0618,-216.055 0/1:84:75,9:75:2991:9:360:-7.47411,0,-243.989 0/0:65:65,0:65:2618:0:0:0,-19.5669,-235.74 0/0:81:78,3:78:3124:3:122:0,-13.0109,-269.857 dDocent_Contig_313 98 . N G 220.858 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=9;CIGAR=1X;DP=11;DPB=11;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=227;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:12:-1.19999,-0.30103,0 1/1:3:0,3:0:0:3:95:-8.86421,-0.90309,0 1/1:2:0,2:0:0:2:47:-4.46336,-0.60206,0 1/1:3:0,2:0:0:2:66:-6.11154,-0.60206,0 1/1:2:0,1:0:0:1:7:-0.629998,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_314 178 . C G 155.108 . AB=0.142857;ABP=80.5629;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=201;DPB=201;DPRA=1.0687;EPP=24.725;EPPR=417.762;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.8;PAIREDR=0.795812;PAO=0;PQA=0;PQR=0;PRO=0;QA=407;QR=7672;RO=191;RPL=10;RPP=24.725;RPPR=417.762;RPR=0;RUN=1;SAF=0;SAP=24.725;SAR=10;SRF=0;SRP=417.762;SRR=191;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1335:0:0:0,-9.93399,-120.405 0/0:36:36,0:36:1453:0:0:0,-10.8371,-131.018 0/0:32:32,0:32:1291:0:0:0,-9.63296,-116.454 0/0:30:30,0:30:1177:0:0:0,-9.0309,-106.205 0/1:27:22,5:22:892:5:205:-10.7072,0,-72.4579 0/1:43:38,5:38:1524:5:202:-5.6172,0,-124.447 dDocent_Contig_315 10 . A G 31690.1 . AB=0.726496;ABP=420.081;AC=9;AF=0.75;AN=12;AO=1191;CIGAR=1X4M;DP=1488;DPB=1488;DPRA=0;EPP=2589.23;EPPR=293.988;GTI=0;LEN=1;MEANALT=2.16667;MQM=37.7699;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.986566;PAIREDR=0.00746269;PAO=0;PQA=0;PQR=0;PRO=0;QA=37829;QR=5313;RO=134;RPL=0;RPP=2589.23;RPPR=293.988;RPR=1191;RUN=1;SAF=1191;SAP=2589.23;SAR=0;SRF=134;SRP=293.988;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:202:17,0,181:17:681:0,181:0,4098:-277.446,-282.564,-338.684,0,-56.0991,-1.61264 0|1:187:22,6,158:22:870:6,158:233,4152:-296.709,-285.502,-355.31,0,-53.8274,-24.0859 1|1:175:24,42,109:24:957:42,109:1658,2942:-254.726,-136.125,-202.319,-46.9506,0,-92.9612 1|1:247:25,90,132:25:967:90,132:3547,4415:-528.727,-266.759,-319.098,-190.035,0,-229.725 0|1:125:25,0,100:25:1009:0,100:0,3963:-307.545,-315.071,-398.253,0,-83.5807,-53.4777 1|1:552:21,19,511:21:829:19,511:745,18259:-1507.04,-1456.72,-1519.21,-85.6016,-97.1912,0 dDocent_Contig_316 90 . A C 88.7269 . AB=0.145455;ABP=63.0614;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=197;DPB=197;DPRA=0.907143;EPP=24.725;EPPR=409.076;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.951872;PAO=0;PQA=0;PQR=0;PRO=0;QA=325;QR=6481;RO=187;RPL=10;RPP=24.725;RPPR=409.076;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=187;SRP=409.076;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:19,5:19:661:5:175:-8.86897,0,-52.5906 0/0:51:50,1:50:1743:1:12:0,-14.1525,-155.958 0/0:21:20,1:20:695:1:35:0,-2.823,-59.3753 0/1:31:28,3:28:970:3:103:-0.278038,0,-78.2816 0/0:41:41,0:41:1412:0:0:0,-12.3422,-127.378 0/0:29:29,0:29:1000:0:0:0,-8.72987,-90.3115 dDocent_Contig_317 70 . T G 13954.7 . AB=0.33641;ABP=456.285;AC=6;AF=0.5;AN=12;AO=656;CIGAR=1X;DP=1950;DPB=1950;DPRA=0;EPP=1427.5;EPPR=2690.44;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998476;PAIREDR=0.935035;PAO=0;PQA=0;PQR=0;PRO=0;QA=22055;QR=44013;RO=1293;RPL=656;RPP=1427.5;RPPR=2810.72;RPR=0;RUN=1;SAF=656;SAP=1427.5;SAR=0;SRF=1279;SRP=2690.44;SRR=14;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:231:149,82:149:5070:82:2761:-179.2,0,-386.938 0/1:428:262,166:262:8925:166:5645:-379.368,0,-674.462 0/1:339:216,123:216:7398:123:4147:-271.383,0,-563.87 0/1:588:387,201:387:13060:201:6762:-431.702,0,-998.32 0/1:135:85,50:85:2913:50:1643:-107.512,0,-221.774 0/1:229:194,34:194:6647:34:1097:-30.3078,0,-529.64 dDocent_Contig_318 47 . A T 1185.42 . AB=0.396552;ABP=13.7928;AC=1;AF=0.0833333;AN=12;AO=49;CIGAR=1X;DP=655;DPB=655;DPRA=0.866521;EPP=109.412;EPPR=1316.75;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.998347;PAO=0;PQA=0;PQR=0;PRO=0;QA=1818;QR=24174;RO=605;RPL=0;RPP=109.412;RPPR=1316.75;RPR=49;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=605;SRP=1316.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:68:68,0:68:2744:0:0:0,-20.47,-247.069 0/0:115:115,0:115:4590:0:0:0,-34.6184,-413.007 0/0:105:105,0:105:4144:0:0:0,-31.6081,-372.926 0/0:169:168,0:168:6720:0:0:0,-50.573,-604.229 0/0:82:79,3:79:3182:3:112:0,-14.2382,-275.993 0/1:116:70,46:70:2794:46:1706:-118.861,0,-216.644 dDocent_Contig_319 41 . T C 987.339 . AB=0.216346;ABP=148.374;AC=2;AF=0.166667;AN=12;AO=45;CIGAR=1X;DP=547;DPB=547;DPRA=1.22714;EPP=100.727;EPPR=1093.09;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1795;QR=20099;RO=502;RPL=0;RPP=100.727;RPPR=1093.09;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=502;SRP=1093.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:68:68,0:68:2711:0:0:0,-20.47,-244.108 0/0:99:99,0:99:3969:0:0:0,-29.802,-357.195 0/0:52:52,0:52:2110:0:0:0,-15.6536,-190.072 0/0:120:120,0:120:4795:0:0:0,-36.1236,-431.45 0/1:92:68,24:68:2683:24:963:-59.2742,0,-213.902 0/1:116:95,21:95:3831:21:832:-40.2733,0,-309.861 dDocent_Contig_320 14 . C G 4828.26 . AB=0.0817656;ABP=2102.73;AC=3;AF=0.25;AN=12;AO=215;CIGAR=3M1X;DP=4144;DPB=4144;DPRA=0;EPP=469.877;EPPR=7739.97;GTI=0;LEN=1;MEANALT=3.8;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8624;QR=142011;RO=3563;RPL=0;RPP=469.877;RPPR=7739.97;RPR=215;RUN=1;SAF=215;SAP=469.877;SAR=0;SRF=3563;SRP=7739.97;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:769:668,0,51,50:668:26568:0,51,50:0,2066,1994:0,-201.088,-2388.47,-30.7244,-2218.11,-2202.76,-36.8907,-2224.27,-2053.91,-2209.22 0|1:868:720,0,51,93:720:28701:0,51,93:0,2045,3746:-91.9911,-308.733,-2672.19,-140.255,-2503.71,-2488.36,0,-2363.46,-2194.98,-2335.47 0|0:616:594,0,6,13:594:23708:0,6,13:0,243,531:0,-178.812,-2131.3,-158.774,-2111.26,-2109.46,-134.99,-2087.49,-2067.45,-2083.57 0|0:744:667,0,37,39:667:26558:0,37,39:0,1473,1544:0,-200.787,-2387.58,-79.4995,-2266.29,-2255.15,-73.7267,-2260.51,-2139.23,-2248.77 0|1:633:499,126,4,0:499:19893:126,4,0:5002,161,0:-261.545,0,-1600.21,-398.49,-1624.87,-2035.44,-411.759,-1638.14,-2036.64,-2049.91 0|1:514:415,78,0,20:415:16583:78,0,20:3107,0,809:-130.899,0,-1342.38,-255.826,-1365.86,-1621.69,-189.127,-1299.16,-1554.99,-1548.97 dDocent_Contig_321 39 . A C 548.112 . AB=0.12938;ABP=445.645;AC=2;AF=0.166667;AN=12;AO=59;CIGAR=1X;DP=1017;DPB=1017;DPRA=1.1041;EPP=131.127;EPPR=2083.28;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.983051;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2291;QR=36709;RO=958;RPL=0;RPP=131.127;RPPR=2083.28;RPR=59;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=958;SRP=2083.28;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:116:104,12:104:3961:12:467:-7.46185,0,-321.631 0/0:150:141,9:141:5364:9:360:0,-12.3907,-449.948 0/1:255:219,36:219:8392:36:1385:-48.163,0,-678.212 0/0:179:177,2:177:6832:2:79:0,-46.3871,-607.177 0/0:168:168,0:168:6400:0:0:0,-50.573,-575.851 0/0:149:149,0:149:5760:0:0:0,-44.8535,-518.295 dDocent_Contig_322 10 . A T 186.814 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=55;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=197;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:131:-12.105,-1.20412,0 1/1:2:0,2:0:0:2:66:-6.26468,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_323 35 . A T 574.08 . AB=0.08;ABP=194.534;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1M1X32M;DP=359;DPB=355.088;DPRA=1.60256;EPP=24.725;EPPR=563.283;GTI=0;LEN=1;MEANALT=8.5;MQM=60;MQMR=60;NS=6;NUMALT=6;ODDS=0;PAIRED=0.3;PAIREDR=0.496183;PAO=0;PQA=0;PQR=0;PRO=0;QA=396;QR=9898;RO=262;RPL=10;RPP=24.725;RPPR=563.283;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=262;SRP=571.936;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:49:33,0,0,0,0,6,0:33:1225:0,0,0,0,6,0:0,0,0,0,210,0:-7.16601,-17.1,-117.37,-17.1,-117.37,-117.37,-17.1,-117.37,-117.37,-117.37,-17.1,-117.37,-117.37,-117.37,-117.37,0,-100.285,-100.285,-100.285,-100.285,-98.4788,-17.1,-117.37,-117.37,-117.37,-117.37,-100.285,-117.37 0|0:85:67,1,0,0,0,15,0:67:2492:1,0,0,0,15,0:35,0,0,0,520,0:-22.1599,-39.4802,-243.169,-42.3289,-243.47,-246.317,-42.3289,-243.47,-246.317,-246.317,-42.3289,-243.47,-246.317,-246.317,-246.317,0,-201.208,-204.056,-204.056,-204.056,-199.54,-42.3289,-243.47,-246.317,-246.317,-246.317,-204.056,-246.317 0|0:48:28,6,0,0,3,1,4:28:1072:6,0,0,3,1,4:212,0,0,114,26,161:-8.83657,0,-86.189,-17.2654,-87.9952,-105.258,-17.2654,-87.9952,-105.258,-105.258,-7.91241,-78.6464,-95.9092,-95.9092,-95.0062,-15.2315,-85.9592,-103.222,-103.222,-93.8729,-102.921,-3.98409,-74.723,-91.9862,-91.9862,-82.637,-89.9499,-90.7821 0|0:61:43,0,0,0,0,11,0:43:1649:0,0,0,0,11,0:0,0,0,0,372,0:-17.2439,-30.1882,-165.582,-30.1882,-165.582,-165.582,-30.1882,-165.582,-165.582,-165.582,-30.1882,-165.582,-165.582,-165.582,-165.582,0,-135.434,-135.434,-135.434,-135.434,-132.122,-30.1882,-165.582,-165.582,-165.582,-165.582,-135.434,-165.582 0|0:39:31,1,3,3,0,1,0:31:1179:1,3,3,0,1,0:37,103,66,0,31,0:0,-6.2944,-102.767,-0.940038,-94.7057,-96.8298,-4.34104,-98.0433,-92.7094,-100.167,-9.33193,-103.068,-97.7329,-101.07,-106.095,-6.84148,-100.581,-95.246,-98.5836,-103.608,-103.307,-9.33193,-103.068,-97.7329,-101.07,-106.095,-103.608,-106.095 0|1:77:60,1,0,1,7,4,1:60:2281:1,0,1,7,4,1:35,0,25,282,144,38:-5.20157,-20.4171,-207.19,-23.2634,-207.491,-210.338,-21.3223,-205.543,-208.391,-208.09,0,-184.245,-187.092,-185.145,-184.985,-11.5183,-195.742,-198.59,-196.643,-175.344,-197.385,-20.1465,-204.374,-207.221,-205.274,-183.976,-195.473,-206.92 dDocent_Contig_324 98 . N A 765.763 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=30;CIGAR=1X;DP=32;DPB=32;DPRA=0;EPP=68.1545;EPPR=0;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=827;QR=0;RO=0;RPL=30;RPP=68.1545;RPPR=0;RPR=0;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:78:-7.21341,-1.20412,0 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 1/1:9:0,8:0:0:8:192:-17.3557,-2.40824,0 1/1:14:0,13:0:0:13:408:-36.9051,-3.91339,0 1/1:3:0,3:0:0:3:88:-8.21126,-0.90309,0 dDocent_Contig_325 143 . T C 70.9583 . AB=0.116667;ABP=79.5909;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=1X;DP=209;DPB=209;DPRA=0.805369;EPP=18.2106;EPPR=441.648;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.712871;PAO=0;PQA=0;PQR=0;PRO=0;QA=280;QR=7865;RO=202;RPL=0;RPP=18.2106;RPPR=441.648;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=441.648;SRR=202;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:39,0:39:1512:0:0:0,-11.7402,-136.322 0/1:35:31,4:31:1258:4:160:-4.24775,0,-102.949 0/1:25:22,3:22:857:3:120:-3.66156,0,-69.905 0/0:35:35,0:35:1334:0:0:0,-10.536,-120.321 0/0:35:35,0:35:1337:0:0:0,-10.536,-120.598 0/0:40:40,0:40:1567:0:0:0,-12.0412,-141.277 dDocent_Contig_326 11 . G T 94.5428 . AB=0.108108;ABP=151.081;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=587;DPB=587;DPRA=1.16597;EPP=29.068;EPPR=1251.61;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998261;PAO=0;PQA=0;PQR=0;PRO=0;QA=476;QR=22662;RO=575;RPL=0;RPP=29.068;RPPR=1251.61;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=575;SRP=1251.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:59,0:59:2360:0:0:0,-17.7608,-212.555 0/1:111:99,12:99:3976:12:476:-9.77304,0,-324.408 0/0:63:63,0:63:2511:0:0:0,-18.9649,-226.122 0/0:96:96,0:96:3669:0:0:0,-28.8989,-330.249 0/0:112:112,0:112:4394:0:0:0,-33.7154,-395.419 0/0:146:146,0:146:5752:0:0:0,-43.9504,-517.51 dDocent_Contig_327 37 . T G 79.2262 . AB=0.0979381;ABP=275.407;AC=2;AF=0.166667;AN=12;AO=31;CIGAR=1X;DP=515;DPB=515;DPRA=0;EPP=70.3259;EPPR=1034.53;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.981366;PAO=0;PQA=0;PQR=0;PRO=0;QA=1183;QR=17294;RO=483;RPL=0;RPP=70.3259;RPPR=1017.38;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=481;SRP=1034.53;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:72:64,8:64:2255:8:312:-6.76762,0,-181.507 0/1:122:111,11:111:4052:11:426:-1.96372,0,-328.071 0/0:45:43,1:43:1468:1:8:0,-12.6702,-131.425 0/0:124:121,3:121:4320:3:113:0,-26.7894,-378.391 0/0:72:69,3:69:2492:3:123:0,-10.2094,-213.039 0/0:80:75,5:75:2707:5:201:0,-5.61188,-225.362 dDocent_Contig_328 9 . T A 13156.2 . AB=0.533565;ABP=11.465;AC=6;AF=0.5;AN=12;AO=461;CIGAR=1X;DP=864;DPB=864;DPRA=0;EPP=1004.06;EPPR=878.114;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.991323;PAIREDR=0.997519;PAO=0;PQA=0;PQR=0;PRO=0;QA=17541;QR=15481;RO=403;RPL=0;RPP=1004.06;RPPR=878.114;RPR=461;RUN=1;SAF=461;SAP=1004.06;SAR=0;SRF=403;SRP=878.114;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:96:64,32:64:2468:32:1229:-82.0055,0,-193.424 0/1:148:54,94:54:2092:94:3584:-278.126,0,-143.955 0/1:107:52,55:52:1998:55:2092:-156.301,0,-147.846 0/1:157:64,93:64:2442:93:3550:-272.359,0,-172.717 0/1:186:74,112:74:2839:112:4248:-326.407,0,-199.695 0/1:170:95,75:95:3642:75:2838:-204.418,0,-276.72 dDocent_Contig_329 14 . A C 58.7659 . AB=0.0980392;ABP=146.157;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=442;DPB=442;DPRA=1.31086;EPP=33.4109;EPPR=932.4;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=560;QR=17002;RO=428;RPL=0;RPP=33.4109;RPPR=932.4;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=428;SRP=932.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:45:45,0:45:1805:0:0:0,-13.5463,-162.66 0/1:102:92,10:92:3633:10:406:-6.19534,0,-296.307 0/0:53:53,0:53:2129:0:0:0,-15.9546,-191.783 0/0:73:69,4:69:2717:4:154:0,-7.74422,-230.421 0/0:78:78,0:78:3082:0:0:0,-23.4803,-277.465 0/0:91:91,0:91:3636:0:0:0,-27.3937,-327.265 dDocent_Contig_330 1 . N A 547.991 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=17;CIGAR=1X;DP=17;DPB=17;DPRA=0;EPP=39.9253;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=59.5294;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=587;QR=0;RO=0;RPL=0;RPP=39.9253;RPPR=0;RPR=17;RUN=1;SAF=0;SAP=39.9253;SAR=17;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:6:0,6:0:0:6:204:-18.6868,-1.80618,0 ./.:.:.:.:.:.:.:. 1/1:6:0,6:0:0:6:208:-19.0596,-1.80618,0 1/1:3:0,3:0:0:3:105:-9.79616,-0.90309,0 dDocent_Contig_331 98 . N T 756.649 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=24;CIGAR=1X;DP=24;DPB=24;DPRA=0;EPP=55.1256;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=819;QR=0;RO=0;RPL=24;RPP=55.1256;RPPR=0;RPR=0;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:100:-9.33053,-0.90309,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:9:0,9:0:0:9:311:-28.3252,-2.70927,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:11:0,11:0:0:11:373:-33.8977,-3.31133,0 dDocent_Contig_332 16 . C T 2377.07 . AB=0.13913;ABP=263.172;AC=0;AF=0;AN=12;AO=32;CIGAR=1X1M1I2M;DP=407;DPB=440.25;DPRA=0;EPP=72.4974;EPPR=595.822;GTI=0;LEN=1;MEANALT=2.33333;MQM=58.125;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.84375;PAIREDR=0.81685;PAO=0;PQA=0;PQR=0;PRO=0;QA=1269;QR=10774;RO=273;RPL=0;RPP=72.4974;RPPR=595.822;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=273;SRP=595.822;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:60:35,0,24:35:1380:0,24:0,969:-69.4171,-79.9532,-193.476,0,-113.589,-106.365 0|0:63:40,7,15:40:1549:7,15:283,592:-36.6626,-25.3679,-150.487,0,-103.884,-122.704 0|0:72:49,9,14:49:1953:9,14:366,548:-30.2987,-15.0533,-173.176,0,-130.83,-156.608 0|0:95:54,16,25:54:2132:16,25:620,956:-62.1764,-27.5926,-198.213,0,-124.598,-167.908 0|0:55:46,0,9:46:1820:0,9:0,353:-15.5716,-29.419,-179.195,0,-150.169,-147.459 0|0:62:49,0,13:49:1940:0,13:0,510:-27.578,-42.3284,-201.989,0,-160.053,-156.14 dDocent_Contig_333 13 . T A 4086.21 . AB=0.327696;ABP=124.985;AC=6;AF=0.5;AN=12;AO=155;CIGAR=1M1X1M;DP=473;DPB=475.667;DPRA=0;EPP=339.589;EPPR=673.995;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=0.929032;PAIREDR=0.97411;PAO=0;PQA=0;PQR=0;PRO=0;QA=6126;QR=12222;RO=309;RPL=0;RPP=339.589;RPPR=673.995;RPR=155;RUN=1;SAF=155;SAP=339.589;SAR=0;SRF=309;SRP=673.995;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:55:40,0,15:40:1579:0,15:0,604:-38.1422,-50.1834,-180.096,0,-130.313,-125.798 0|1:105:75,0,29:75:2949:0,29:0,1167:-73.5916,-96.1688,-338.712,0,-242.533,-233.803 0|1:81:44,0,37:44:1766:0,37:0,1422:-103.854,-117.099,-262.616,0,-145.909,-134.771 0|1:106:67,8,31:67:2646:8,31:305,1227:-80.813,-75.9702,-291.269,0,-192.707,-208.388 0|1:53:43,0,10:43:1674:0,10:0,380:-18.5914,-31.5357,-169.109,0,-137.955,-134.945 0|1:73:40,0,33:40:1608:0,33:0,1326:-97.6267,-109.668,-242.179,0,-132.913,-122.979 dDocent_Contig_334 16 . G C 1484.39 . AB=0.166333;ABP=485.56;AC=3;AF=0.25;AN=12;AO=88;CIGAR=2X;DP=1277;DPB=1277;DPRA=1.00946;EPP=194.1;EPPR=2504.55;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.99566;PAO=0;PQA=0;PQR=0;PRO=0;QA=3500;QR=45104;RO=1152;RPL=0;RPP=194.1;RPPR=2504.55;RPR=88;RUN=1;SAF=88;SAP=194.1;SAR=0;SRF=1152;SRP=2504.55;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:154:121,33,0:121:4677:33,0:1306,0:-71.4465,0,-374.575,-107.871,-384.509,-491.987 0|1:173:144,20,9:144:5627:20,9:780,350:-20.76,0,-456.578,-35.3508,-433.841,-495.239 0|0:91:91,0,0:91:3517:0,0:0,0:0,-27.3937,-316.602,-27.3937,-316.602,-316.602 0|1:172:139,30,3:139:5455:30,3:1209,110:-57.8418,0,-439.604,-90.6995,-439.647,-538.398 0|0:332:314,0,17:314:12351:0,17:0,672:0,-94.5234,-1110.44,-39.1902,-1055.14,-1050.02 0|0:355:343,5,7:343:13477:5,7:205,282:0,-86.3299,-1193.25,-80.014,-1171.52,-1186.33 dDocent_Contig_335 98 . N C 151.949 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=150;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 1/1:2:0,2:0:0:2:58:-5.50886,-0.60206,0 1/1:2:0,2:0:0:2:28:-2.65997,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_336 108 . C A 2397.49 . AB=0.147929;ABP=1640.6;AC=2;AF=0.166667;AN=12;AO=227;CIGAR=1X;DP=3656;DPB=3656;DPRA=1.09372;EPP=495.935;EPPR=7442.47;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7823;QR=115631;RO=3426;RPL=0;RPP=495.935;RPPR=7442.47;RPR=227;RUN=1;SAF=0;SAP=495.935;SAR=227;SRF=0;SRP=7442.47;SRR=3426;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:526:525,0:525:17752:0:0:0,-158.041,-1597.12 0/0:554:553,1:553:18647:1:35:0,-163.272,-1674.49 0/0:434:433,1:433:14612:1:35:0,-127.148,-1311.46 0/0:621:620,0:620:20970:0:0:0,-186.639,-1886.91 0/1:742:595,147:595:20032:147:5040:-230.412,0,-1579.23 0/1:779:700,78:700:23618:78:2713:-10.1502,0,-1890.95 dDocent_Contig_337 7 . T C 69954.4 . AB=0.800911;ABP=1729.35;AC=8;AF=0.666666;AN=12;AO=2241;CIGAR=1X3M;DP=2727;DPB=2727;DPRA=0;EPP=4869.28;EPPR=741.311;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.999108;PAIREDR=0.997059;PAO=0;PQA=0;PQR=0;PRO=0;QA=86154;QR=13041;RO=340;RPL=0;RPP=4869.28;RPPR=741.311;RPR=2241;RUN=1;SAF=2241;SAP=4869.28;SAR=0;SRF=340;SRP=741.311;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:390:56,0,334:56:2158:0,334:0,12896:-1042.66,-1059.52,-1236.72,0,-177.589,-77.0454 0|1:317:42,1,274:42:1617:1,274:37,10500:-849.12,-858.736,-991.204,0,-129.756,-50.3009 0|1:307:30,0,277:30:1156:0,277:0,10658:-866.39,-875.421,-970.342,0,-95.3064,-11.9211 1|1:532:46,0,483:46:1759:0,483:0,18532:-1508.34,-1522.19,-1666.53,-1.01687,-145.397,0 1|1:614:84,92,437:84:3219:92,437:3538,16802:-1380.37,-1115.19,-1351.68,-26.2755,0,-158.916 0|1:567:82,49,436:82:3132:49,436:1864,16766:-1351.76,-1223.57,-1465.79,0,-104.097,-125.723 dDocent_Contig_338 30 . A T 498.242 . AB=0.166667;ABP=170.937;AC=1;AF=0.0833333;AN=12;AO=37;CIGAR=1X;DP=770;DPB=770;DPRA=1.37719;EPP=83.3548;EPPR=1594.7;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1458;QR=29134;RO=733;RPL=0;RPP=83.3548;RPPR=1594.7;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=733;SRP=1594.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:75:75,0:75:2961:0:0:0,-22.5772,-266.6 0/0:113:113,0:113:4484:0:0:0,-34.0164,-403.491 0/0:139:139,0:139:5529:0:0:0,-41.8432,-497.448 0/0:140:132,8:132:5260:8:322:0,-12.7958,-443.916 0/0:129:129,0:129:5155:0:0:0,-38.8329,-463.808 0/1:174:145,29:145:5745:29:1136:-50.143,0,-464.483 dDocent_Contig_339 34 . C T 42.4303 . AB=0.0985915;ABP=102.378;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=354;DPB=354;DPRA=1.05263;EPP=46.4397;EPPR=728.282;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.652695;PAO=0;PQA=0;PQR=0;PRO=0;QA=774;QR=13332;RO=334;RPL=0;RPP=46.4397;RPPR=728.282;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=334;SRP=728.282;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:41,3:41:1656:3:112:0,-2.80253,-138.82 0/1:71:64,7:64:2569:7:284:-4.56086,0,-209.966 0/0:82:75,7:75:2943:7:256:0,-1.30358,-241.564 0/0:43:40,3:40:1611:3:122:0,-1.5718,-133.848 0/0:37:37,0:37:1485:0:0:0,-11.1381,-133.892 0/0:77:77,0:77:3068:0:0:0,-23.1793,-276.19 dDocent_Contig_340 9 . T G 143.7 . AB=0.139535;ABP=100.07;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=380;DPB=380;DPRA=1.28916;EPP=39.9253;EPPR=789.083;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.941176;PAIREDR=0.955801;PAO=0;PQA=0;PQR=0;PRO=0;QA=639;QR=13831;RO=362;RPL=0;RPP=39.9253;RPPR=789.083;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=362;SRP=789.083;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:53:53,0:53:2037:0:0:0,-15.9546,-183.566 0/1:86:73,12:73:2770:12:448:-14.6887,0,-223.505 0/0:57:57,0:57:2186:0:0:0,-17.1587,-196.96 0/0:56:56,0:56:2146:0:0:0,-16.8577,-193.366 0/0:78:76,2:76:2895:2:74:0,-16.4549,-253.698 0/0:50:47,3:47:1797:3:117:0,-4.14112,-151.068 dDocent_Contig_341 12 . G C 1610.27 . AB=0.130165;ABP=1153.03;AC=2;AF=0.166667;AN=12;AO=170;CIGAR=1X;DP=2637;DPB=2637;DPRA=0;EPP=372.161;EPPR=5360.03;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999595;PAO=0;PQA=0;PQR=0;PRO=0;QA=6760;QR=96377;RO=2467;RPL=0;RPP=372.161;RPPR=5360.03;RPR=170;RUN=1;SAF=170;SAP=372.161;SAR=0;SRF=2467;SRP=5360.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:288:270,18:270:10475:18:697:0,-23.6453,-879.125 0/1:490:420,70:420:16407:70:2791:-103.794,0,-1327.98 0/1:478:422,56:422:16454:56:2242:-58.0467,0,-1335.82 0/0:425:401,24:401:15666:24:951:0,-42.0435,-1322.97 0/0:488:487,1:487:19168:1:41:0,-142.808,-1719.57 0/0:468:467,1:467:18207:1:38:0,-137.085,-1633.53 dDocent_Contig_343 12 . C T 8179.28 . AB=0.355342;ABP=154.416;AC=6;AF=0.5;AN=12;AO=296;CIGAR=1X4M;DP=833;DPB=833;DPRA=0;EPP=645.766;EPPR=1136.52;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11869;QR=20383;RO=522;RPL=0;RPP=645.766;RPPR=1136.52;RPR=296;RUN=1;SAF=296;SAP=645.766;SAR=0;SRF=522;SRP=1136.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:115:87,0,28:87:3410:0,28:0,1114:-65.9284,-92.118,-372.528,0,-280.806,-272.377 0|1:183:117,0,65:117:4575:0,65:0,2615:-180.495,-215.715,-591.847,0,-376.336,-356.769 0|1:218:151,0,66:151:5907:0,66:0,2637:-171.896,-217.351,-703.006,0,-485.809,-465.941 0|1:199:104,12,83:104:4060:12,83:462,3341:-244.055,-237.435,-567.566,0,-295.826,-308.769 0|1:47:42,0,5:42:1614:0,5:0,205:-4.6866,-17.3299,-149.793,0,-132.87,-131.365 0|1:71:21,1,49:21:817:1,49:39,1957:-154.865,-157.981,-224.818,0,-63.9348,-52.3902 dDocent_Contig_344 38 . T C 488.685 . AB=0.196721;ABP=100.477;AC=3;AF=0.25;AN=12;AO=31;CIGAR=1X;DP=243;DPB=243;DPRA=0;EPP=70.3259;EPPR=461.191;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.516129;PAIREDR=0.526066;PAO=0;PQA=0;PQR=0;PRO=0;QA=1210;QR=8376;RO=211;RPL=0;RPP=70.3259;RPPR=461.191;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=211;SRP=461.191;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:42:38,4:38:1499:4:132:0,-0.448338,-122.961 0/0:41:39,2:39:1536:2:81:0,-4.6565,-130.795 0/1:26:22,4:22:881:4:162:-7.14018,0,-71.7726 0/1:57:50,7:50:1984:7:279:-8.32132,0,-161.597 0/0:38:37,1:37:1474:1:41:0,-7.34457,-128.815 0/1:39:25,13:25:1002:13:515:-35.0124,0,-78.801 dDocent_Contig_345 98 . N T 39.1105 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.21888;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=41;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:41:-3.89396,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_346 23 . A T 105.559 . AB=0.09375;ABP=415.861;AC=1;AF=0.0833333;AN=12;AO=49;CIGAR=1X;DP=1749;DPB=1749;DPRA=1.16571;EPP=109.412;EPPR=3692.34;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999411;PAO=0;PQA=0;PQR=0;PRO=0;QA=1961;QR=67296;RO=1699;RPL=0;RPP=109.412;RPPR=3692.34;RPR=49;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=1699;SRP=3692.34;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:259:255,3:255:10130:3:120:0,-66.6533,-899.948 0/0:319:319,0:319:12632:0:0:0,-96.0286,-1136.03 0/0:311:297,14:297:11730:14:556:0,-43.241,-1004.54 0/0:366:361,5:361:14299:5:204:0,-91.4329,-1267.11 0/0:206:206,0:206:8130:0:0:0,-62.0122,-731.291 0/1:288:261,27:261:10375:27:1081:-10.8747,0,-846.393 dDocent_Contig_347 10 . A T 183.177 . AB=0.136842;ABP=111.835;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=426;DPB=426;DPRA=0.92953;EPP=42.0968;EPPR=886.8;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.333333;PAIREDR=0.481572;PAO=0;PQA=0;PQR=0;PRO=0;QA=704;QR=16200;RO=407;RPL=0;RPP=42.0968;RPPR=886.8;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=407;SRP=886.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:46:44,2:44:1756:2:63:0,-7.86422,-152.279 0/0:94:94,0:94:3727:0:0:0,-28.2968,-335.454 0/0:50:49,1:49:1956:1:38:0,-11.2542,-172.436 0/1:95:82,13:82:3244:13:521:-18.6364,0,-263.424 0/0:55:54,0:54:2171:0:0:0,-16.2556,-195.153 0/0:86:84,2:84:3346:2:82:0,-18.1089,-293.407 dDocent_Contig_350 21 . A G 789.08 . AB=0.16041;ABP=296.5;AC=4;AF=0.333333;AN=12;AO=47;CIGAR=1X;DP=487;DPB=487;DPRA=0.755155;EPP=105.07;EPPR=958.458;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1868;QR=17473;RO=440;RPL=0;RPP=105.07;RPPR=958.458;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=440;SRP=958.458;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:71:62,9:62:2461:9:359:-11.2991,0,-200.269 0/1:50:45,5:45:1781:5:195:-2.87148,0,-145.457 0/1:125:97,28:97:3853:28:1118:-63.2767,0,-309.143 0/1:47:42,5:42:1684:5:196:-3.86552,0,-137.637 0/0:99:99,0:99:3910:0:0:0,-29.802,-351.907 0/0:95:95,0:95:3784:0:0:0,-28.5978,-340.568 dDocent_Contig_351 14 . A G 1235.57 . AB=0.0425321;ABP=1840.76;AC=0;AF=0;AN=12;AO=53;CIGAR=5M1X7M;DP=2856;DPB=2860.46;DPRA=1.01915;EPP=118.098;EPPR=5488.15;GTI=0;LEN=1;MEANALT=7.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2138;QR=99263;RO=2526;RPL=0;RPP=118.098;RPPR=5488.15;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=2526;SRP=5488.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:458:436,6,2:436:17084:6,2:223,82:0,-113.006,-1516.01,-124.479,-1511.05,-1528.7 0|0:533:461,47,11:461:18187:47,11:1791,443:-8.13613,0,-1482.28,-110.395,-1459.92,-1603.52 0|0:394:363,12,0:363:14348:12,0:455,0:0,-71.9666,-1249.11,-109.274,-1252.73,-1290.03 0|0:546:514,15,0:514:20180:15,0:563,0:0,-108.614,-1763.8,-154.729,-1768.31,-1814.43 0|0:447:391,16,8:391:15338:16,8:616,326:0,-67.1287,-1323.69,-90.806,-1301.61,-1349.78 0|0:478:361,72,32:361:14126:72,32:2742,1287:-116.235,0,-1139.77,-118.843,-1055.38,-1270.66 dDocent_Contig_352 23 . G T 241.901 . AB=0.0980663;ABP=1018.94;AC=1;AF=0.0833333;AN=12;AO=128;CIGAR=1X;DP=3490;DPB=3490;DPRA=0;EPP=280.959;EPPR=7303.5;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4783;QR=132265;RO=3362;RPL=0;RPP=280.959;RPPR=7303.5;RPR=128;RUN=1;SAF=128;SAP=280.959;SAR=0;SRF=3362;SRP=7303.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:431:418,13:418:16331:13:468:0,-87.2901,-1426.14 0/0:580:577,3:577:22682:3:117:0,-163.687,-2028.64 0/0:539:515,24:515:20404:24:903:0,-80.6859,-1753.14 0/1:724:653,71:653:25751:71:2692:-24.5089,0,-2097.49 0/0:585:569,16:569:22327:16:569:0,-124.581,-1956.11 0/0:631:630,1:630:24770:1:34:0,-186.551,-2223.9 dDocent_Contig_353 14 . G C 233.225 . AB=0.129496;ABP=168.745;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=802;DPB=802;DPRA=1.04827;EPP=42.0968;EPPR=1705.44;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=56.0013;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.889031;PAO=0;PQA=0;PQR=0;PRO=0;QA=724;QR=31148;RO=784;RPL=0;RPP=42.0968;RPPR=1705.44;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=784;SRP=1705.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:108:108,0:108:4324:0:0:0,-32.5112,-367.041 0/0:151:151,0:151:5995:0:0:0,-45.4555,-520.949 0/0:145:145,0:145:5727:0:0:0,-43.6493,-507.719 0/0:156:156,0:156:6205:0:0:0,-46.9607,-523.256 0/1:139:121,18:121:4820:18:724:-23.6412,0,-375.363 0/0:103:103,0:103:4077:0:0:0,-31.0061,-338.66 dDocent_Contig_354 70 . T A 34957.6 . AB=0.629831;ABP=271.967;AC=6;AF=0.5;AN=12;AO=1157;CIGAR=1X;DP=1837;DPB=1837;DPRA=0;EPP=2515.4;EPPR=1475.27;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998525;PAO=0;PQA=0;PQR=0;PRO=0;QA=45049;QR=26737;RO=678;RPL=1157;RPP=2515.4;RPPR=1475.27;RPR=0;RUN=1;SAF=1157;SAP=2515.4;SAR=0;SRF=678;SRP=1475.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:214:67,147:67:2641:147:5670:-445.753,0,-173.416 0/1:255:119,135:119:4691:135:5202:-391.322,0,-345.366 0/1:407:160,247:160:6321:247:9684:-748.489,0,-446.164 0/1:333:91,242:91:3557:242:9393:-744.653,0,-219.942 0/1:250:89,160:89:3523:160:6221:-484.675,0,-242.082 0/1:378:152,226:152:6004:226:8879:-684.865,0,-426.382 dDocent_Contig_355 13 . T A 449.328 . AB=0.146226;ABP=233.473;AC=2;AF=0.166667;AN=12;AO=31;CIGAR=1X;DP=539;DPB=539;DPRA=1.29664;EPP=70.3259;EPPR=1106.12;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998031;PAO=0;PQA=0;PQR=0;PRO=0;QA=1210;QR=20359;RO=508;RPL=0;RPP=70.3259;RPPR=1106.12;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=508;SRP=1106.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:56:56,0:56:2258:0:0:0,-16.8577,-203.375 0/1:68:54,14:54:2159:14:531:-27.6528,0,-174.012 0/0:23:23,0:23:931:0:0:0,-6.92369,-84.0916 0/1:144:127,17:127:5109:17:679:-18.0936,0,-416.318 0/0:90:90,0:90:3617:0:0:0,-27.0927,-325.539 0/0:158:158,0:158:6285:0:0:0,-47.5627,-565.396 dDocent_Contig_356 29 . T G 44480 . AB=0.751258;ABP=765.759;AC=7;AF=0.583333;AN=12;AO=1390;CIGAR=1X;DP=1757;DPB=1757;DPRA=0;EPP=3021.36;EPPR=799.941;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998561;PAIREDR=0.997275;PAO=0;PQA=0;PQR=0;PRO=0;QA=54986;QR=14690;RO=367;RPL=0;RPP=3021.36;RPPR=799.941;RPR=1390;RUN=1;SAF=1390;SAP=3021.36;SAR=0;SRF=367;SRP=799.941;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:212:28,184:28:1101:184:7264:-589.605,0,-35.5511 0/1:311:102,209:102:4068:209:8296:-652.557,0,-272.469 0/1:203:60,143:60:2413:143:5697:-451.42,0,-156.204 0/1:346:112,234:112:4496:234:9239:-726.799,0,-300.401 1/1:366:21,345:21:836:345:13651:-1152.03,-34.6261,0 0/1:319:44,275:44:1776:275:10839:-878.787,0,-64.0221 dDocent_Contig_357 30 . A T 154.713 . AB=0.111111;ABP=298.572;AC=2;AF=0.166667;AN=12;AO=27;CIGAR=1X;DP=761;DPB=761;DPRA=0.706278;EPP=61.6401;EPPR=1596.87;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1001;QR=28561;RO=734;RPL=0;RPP=61.6401;RPPR=1596.87;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=734;SRP=1596.87;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:90:88,2:88:3402:2:75:0,-19.9726,-299.151 0/0:143:143,0:143:5603:0:0:0,-43.0473,-504.154 0/1:114:101,13:101:3882:13:479:-9.13146,0,-315.087 0/1:111:99,12:99:3861:12:447:-7.15343,0,-314.113 0/0:162:162,0:162:6325:0:0:0,-48.7669,-569.052 0/0:141:141,0:141:5488:0:0:0,-42.4452,-493.82 dDocent_Contig_358 20 . C T 48.7792 . AB=0.0933333;ABP=218.478;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X;DP=482;DPB=482;DPRA=1.39764;EPP=50.7827;EPPR=999.716;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.971678;PAO=0;PQA=0;PQR=0;PRO=0;QA=883;QR=18365;RO=459;RPL=0;RPP=50.7827;RPPR=999.716;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=459;SRP=999.716;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:70:64,6:64:2552:6:236:-0.53906,0,-208.741 0/0:100:95,5:95:3769:5:204:0,-11.359,-320.478 0/0:75:75,0:75:3015:0:0:0,-22.5772,-271.429 0/1:80:71,8:71:2857:8:322:-5.15835,0,-233.03 0/0:52:52,0:52:2088:0:0:0,-15.6536,-188.103 0/0:105:102,3:102:4084:3:121:0,-20.328,-356.253 dDocent_Contig_359 28 . T C 103524 . AB=0.847269;ABP=942.599;AC=10;AF=0.833333;AN=12;AO=3087;CIGAR=1X3M2X;DP=3412;DPB=3412;DPRA=0;EPP=6706.35;EPPR=369.989;GTI=0;LEN=1;MEANALT=4.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.999676;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=121080;QR=6668;RO=169;RPL=0;RPP=6706.35;RPPR=369.989;RPR=3087;RUN=1;SAF=3087;SAP=6706.35;SAR=0;SRF=169;SRP=369.989;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:392:25,0,348:25:1001:0,348:0,13636:-1136.03,-1143.56,-1226.02,-22.288,-104.758,0 1|1:588:13,35,511:13:516:35,511:1372,19994:-1751.28,-1642.37,-1674.32,-111.346,-41.0058,0 0|1:347:38,10,291:38:1498:10,291:404,11540:-938.458,-916.59,-1036.82,0,-89.928,-35.6365 0|1:550:53,13,469:53:2090:13,469:520,18321:-1490.15,-1463.27,-1631.32,0,-129.119,-30.772 1|1:800:7,2,790:7:278:2,790:80,30992:-2761.5,-2757.01,-2779.3,-214.929,-231.223,0 1|1:735:33,22,678:33:1285:22,678:867,26597:-2275.82,-2214.43,-2313.41,-98.4973,-132.769,0 dDocent_Contig_360 45 . A G 1003.11 . AB=0.138783;ABP=599.133;AC=1;AF=0.0833333;AN=12;AO=74;CIGAR=1X;DP=2102;DPB=2102;DPRA=1.3632;EPP=163.699;EPPR=4393.73;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2915;QR=79613;RO=2026;RPL=0;RPP=163.699;RPPR=4393.73;RPR=74;RUN=1;SAF=74;SAP=163.699;SAR=0;SRF=2026;SRP=4402.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:210:210,0:210:8274:0:0:0,-63.2163,-744.257 0/0:326:325,1:325:12748:1:41:0,-94.0412,-1142.38 0/0:286:285,0:285:11237:0:0:0,-85.7935,-1010.51 0/0:360:360,0:360:14206:0:0:0,-108.371,-1277.54 0/0:394:394,0:394:15473:0:0:0,-118.606,-1391.49 0/1:526:452,73:452:17675:73:2874:-100.629,0,-1431.3 dDocent_Contig_361 32 . A T 1524.06 . AB=0.309278;ABP=64.304;AC=3;AF=0.25;AN=12;AO=64;CIGAR=1X;DP=338;DPB=338;DPRA=1.40952;EPP=141.985;EPPR=595.822;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=59.8571;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0;PAIREDR=0.384615;PAO=0;PQA=0;PQR=0;PRO=0;QA=2509;QR=10743;RO=273;RPL=0;RPP=141.985;RPPR=595.822;RPR=64;RUN=1;SAF=64;SAP=141.985;SAR=0;SRF=273;SRP=595.822;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:55:53,2:53:2087:2:77:0,-9.24845,-180.708 0/1:58:46,11:46:1786:11:442:-22.5661,0,-143.38 0/1:60:29,31:29:1157:31:1232:-93.0888,0,-86.3482 0/1:76:58,18:58:2282:18:677:-38.3608,0,-182.675 0/0:47:45,2:45:1766:2:81:0,-6.46268,-151.443 0/0:42:42,0:42:1665:0:0:0,-12.6433,-150.081 dDocent_Contig_362 95 . C T 122.416 . AB=0.120567;ABP=179.331;AC=2;AF=0.166667;AN=12;AO=31;CIGAR=1X;DP=572;DPB=572;DPRA=1.00421;EPP=70.3259;EPPR=1177.78;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.967742;PAIREDR=0.966728;PAO=0;PQA=0;PQR=0;PRO=0;QA=1084;QR=19001;RO=541;RPL=31;RPP=70.3259;RPPR=1177.78;RPR=0;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=541;SRP=1177.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:64:57,7:57:1986:7:250:-3.58076,0,-159.745 0/0:131:127,4:127:4463:4:143:0,-26.2135,-388.629 0/1:77:67,10:67:2363:10:359:-9.47432,0,-189.75 0/0:96:88,8:88:3089:8:260:0,-5.184,-254.527 0/0:95:95,0:95:3337:0:0:0,-28.5978,-300.551 0/0:109:107,2:107:3763:2:72:0,-25.9755,-332.038 dDocent_Contig_363 16 . C A 728.314 . AB=0.138462;ABP=445.79;AC=2;AF=0.166667;AN=12;AO=79;CIGAR=1X3M1X;DP=1073;DPB=1073;DPRA=0;EPP=174.557;EPPR=2118.02;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3073;QR=37961;RO=974;RPL=0;RPP=174.557;RPPR=2118.02;RPR=79;RUN=1;SAF=79;SAP=174.557;SAR=0;SRF=974;SRP=2118.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:105:103,2:103:4007:2:80:0,-24.0164,-353.088 0|0:192:186,3:186:7253:3:118:0,-46.1917,-641.61 0|1:232:208,24:208:8101:24:941:-15.1583,0,-658.931 0|1:158:124,30:124:4838:30:1166:-58.4866,0,-388.648 0|0:189:168,13:168:6514:13:491:0,-10.3459,-541.55 0|0:197:185,7:185:7248:7:277:0,-32.8975,-626.774 dDocent_Contig_364 98 . N G 373.294 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=12;CIGAR=1X;DP=12;DPB=12;DPRA=0;EPP=29.068;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=389;QR=0;RO=0;RPL=12;RPP=29.068;RPPR=0;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 1/1:3:0,3:0:0:3:98:-9.14441,-0.90309,0 1/1:2:0,2:0:0:2:67:-6.36304,-0.60206,0 1/1:4:0,4:0:0:4:133:-12.299,-1.20412,0 1/1:2:0,2:0:0:2:58:-5.50862,-0.60206,0 dDocent_Contig_365 98 . N C 268.22 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=11;CIGAR=1X;DP=11;DPB=11;DPRA=0;EPP=26.8965;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=276;QR=0;RO=0;RPL=11;RPP=26.8965;RPPR=0;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:24:-2.39989,-0.30103,0 1/1:3:0,3:0:0:3:63:-5.87915,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:74:-6.90557,-0.90309,0 1/1:2:0,2:0:0:2:45:-4.27369,-0.60206,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 dDocent_Contig_366 48 . A C 2379.4 . AB=0.177461;ABP=700.593;AC=2;AF=0.166667;AN=12;AO=137;CIGAR=1X;DP=2014;DPB=2014;DPRA=1.24316;EPP=300.502;EPPR=4068.01;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992004;PAO=0;PQA=0;PQR=0;PRO=0;QA=5231;QR=70092;RO=1876;RPL=0;RPP=300.502;RPPR=4068.01;RPR=137;RUN=1;SAF=137;SAP=300.502;SAR=0;SRF=1876;SRP=4076.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:273:273,0:273:10197:0:0:0,-82.1812,-917.428 0/0:419:419,0:419:15651:0:0:0,-126.132,-1407.94 0/0:162:162,0:162:6080:0:0:0,-48.7669,-547.166 0/0:388:387,0:387:14376:0:0:0,-116.499,-1292.89 0/1:361:279,82:279:10390:82:3117:-171.996,0,-826.118 0/1:411:356,55:356:13398:55:2114:-66.7577,0,-1081.57 dDocent_Contig_367 9 . G A 798.342 . AB=0.123824;ABP=787.191;AC=2;AF=0.166667;AN=12;AO=147;CIGAR=1X;DP=2330;DPB=2330;DPRA=0;EPP=322.217;EPPR=4741.16;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999542;PAO=0;PQA=0;PQR=0;PRO=0;QA=5568;QR=83462;RO=2182;RPL=0;RPP=322.217;RPPR=4741.16;RPR=147;RUN=1;SAF=147;SAP=322.217;SAR=0;SRF=2182;SRP=4741.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:292:268,24:268:10277:24:896:0,-6.94463,-843.612 0/1:445:398,47:398:15248:47:1794:-27.7539,0,-1237.63 0/1:193:161,32:161:6129:32:1230:-52.8939,0,-493.452 0/0:384:364,20:364:13875:20:774:0,-45.6073,-1178.14 0/0:557:540,17:540:20646:17:606:0,-112.818,-1802.17 0/0:459:451,7:451:17287:7:268:0,-113.777,-1530.47 dDocent_Contig_368 20 . A T 45.2338 . AB=0.130435;ABP=30.2953;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=227;DPB=227;DPRA=0.563725;EPP=9.52472;EPPR=489.42;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.959821;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=8926;RO=224;RPL=0;RPP=9.52472;RPPR=489.42;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=224;SRP=489.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:20,3:20:797:3:123:-4.5411,0,-65.1232 0/0:17:17,0:17:682:0:0:0,-5.11751,-61.7087 0/0:25:25,0:25:1000:0:0:0,-7.52575,-90.296 0/0:30:30,0:30:1197:0:0:0,-9.0309,-108.007 0/0:71:71,0:71:2820:0:0:0,-21.3731,-253.906 0/0:61:61,0:61:2430:0:0:0,-18.3628,-218.847 dDocent_Contig_369 12 . G A 49445.9 . AB=0.398605;ABP=399.77;AC=6;AF=0.5;AN=12;AO=1771;CIGAR=1X;DP=4443;DPB=4443;DPRA=0;EPP=3848.69;EPPR=5800.84;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999435;PAIREDR=0.999625;PAO=0;PQA=0;PQR=0;PRO=0;QA=69893;QR=103588;RO=2670;RPL=0;RPP=3848.69;RPPR=5800.84;RPR=1771;RUN=1;SAF=1771;SAP=3848.69;SAR=0;SRF=2670;SRP=5800.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:558:264,293:264:10250:293:11539:-870.01,0,-754.177 0/1:774:518,256:518:20187:256:10130:-678.098,0,-1582.33 0/1:765:486,279:486:18789:279:11019:-760.733,0,-1459.38 0/1:680:278,401:278:10716:401:15821:-1217.98,0,-759.096 0/1:795:547,248:547:21246:248:9873:-648.656,0,-1671.25 0/1:871:577,294:577:22400:294:11511:-773.103,0,-1752.13 dDocent_Contig_370 35 . T A 564.119 . AB=0.155251;ABP=229.091;AC=2;AF=0.166667;AN=12;AO=41;CIGAR=1X;DP=940;DPB=940;DPRA=0.495763;EPP=92.0407;EPPR=1955.16;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.979978;PAO=0;PQA=0;PQR=0;PRO=0;QA=1633;QR=34598;RO=899;RPL=0;RPP=92.0407;RPPR=1955.16;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=899;SRP=1955.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:88:80,8:80:3053:8:320:-2.67645,0,-248.419 0/1:131:105,26:105:4009:26:1041:-54.5481,0,-321.434 0/0:104:98,6:98:3771:6:235:0,-9.78661,-317.945 0/0:145:144,1:144:5548:1:37:0,-39.9515,-495.557 0/0:165:165,0:165:6329:0:0:0,-49.6699,-569.488 0/0:307:307,0:307:11888:0:0:0,-92.4162,-1069.29 dDocent_Contig_371 11 . T A 1259.87 . AB=0.252336;ABP=117.023;AC=1;AF=0.0833333;AN=12;AO=68;CIGAR=1X;DP=1124;DPB=1124;DPRA=1.68258;EPP=150.67;EPPR=2296.09;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2675;QR=41641;RO=1056;RPL=0;RPP=150.67;RPPR=2296.09;RPR=68;RUN=1;SAF=68;SAP=150.67;SAR=0;SRF=1056;SRP=2296.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:173:173,0:173:6771:0:0:0,-52.0782,-609.149 0/1:214:160,54:160:6295:54:2117:-126.306,0,-501.925 0/0:198:197,1:197:7826:1:41:0,-55.5094,-699.869 0/0:293:280,13:280:11045:13:517:0,-41.3236,-946.522 0/0:106:106,0:106:4176:0:0:0,-31.9092,-375.836 0/0:140:140,0:140:5528:0:0:0,-42.1442,-497.382 dDocent_Contig_372 98 . N T 133.745 . AB=0;ABP=0;AC=8;AF=0.8;AN=10;AO=5;CIGAR=1X;DP=6;DPB=6;DPRA=1.25;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=129;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 0/0:1:0,0:0:0:0:0:0,0,0 1/1:1:0,1:0:0:1:18:-1.79997,-0.30103,0 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 dDocent_Contig_373 82 . C T 162.819 . AB=0.134831;ABP=106.094;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=381;DPB=381;DPRA=1.52397;EPP=29.068;EPPR=799.941;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=0.479564;PAO=0;PQA=0;PQR=0;PRO=0;QA=476;QR=14494;RO=367;RPL=5;RPP=3.73412;RPPR=41.8305;RPR=7;RUN=1;SAF=5;SAP=3.73412;SAR=7;SRF=224;SRP=41.8305;SRR=143;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:65:65,0:65:2518:0:0:0,-19.5669,-226.794 0/0:74:74,0:74:2891:0:0:0,-22.2762,-260.328 0/0:29:29,0:29:1137:0:0:0,-8.72987,-102.609 0/0:73:73,0:73:2940:0:0:0,-21.9752,-264.69 0/0:51:51,0:51:2040:0:0:0,-15.3525,-183.787 0/1:89:75,12:75:2968:12:476:-16.6006,0,-240.619 dDocent_Contig_374 59 . T C 1355.36 . AB=0.410256;ABP=11.1951;AC=3;AF=0.25;AN=12;AO=48;CIGAR=1X;DP=257;DPB=257;DPRA=0.835714;EPP=107.241;EPPR=456.848;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.9375;PAIREDR=0.980861;PAO=0;PQA=0;PQR=0;PRO=0;QA=1904;QR=8278;RO=209;RPL=48;RPP=107.241;RPPR=456.848;RPR=0;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=209;SRP=456.848;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:597:0:0:0,-4.51545,-54.0701 0/0:21:21,0:21:821:0:0:0,-6.32163,-74.2029 0/1:20:11,9:11:442:9:366:-27.2846,0,-34.1149 0/1:45:22,23:22:882:23:904:-68.1202,0,-66.1413 0/0:104:104,0:104:4118:0:0:0,-31.3071,-370.595 0/1:52:36,16:36:1418:16:634:-41.7404,0,-112.214 dDocent_Contig_375 21 . C T 133.852 . AB=0.123596;ABP=112.535;AC=1;AF=0.0833333;AN=12;AO=26;CIGAR=1X;DP=927;DPB=927;DPRA=0.745918;EPP=59.4686;EPPR=1959.51;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.99889;PAO=0;PQA=0;PQR=0;PRO=0;QA=1053;QR=36058;RO=901;RPL=0;RPP=59.4686;RPPR=1959.51;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=901;SRP=1959.51;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:102:95,7:95:3788:7:285:0,-4.68065,-314.912 0/0:181:178,3:178:7119:3:117:0,-43.5762,-629.456 0/1:89:78,11:78:3136:11:446:-13.7039,0,-255.518 0/0:189:187,2:187:7497:2:82:0,-49.115,-666.565 0/0:170:167,3:167:6672:3:123:0,-39.7103,-588.723 0/0:196:196,0:196:7846:0:0:0,-59.0019,-705.719 dDocent_Contig_376 22 . T G 10664.2 . AB=0.167754;ABP=3529.52;AC=6;AF=0.5;AN=12;AO=617;CIGAR=1X;DP=3678;DPB=3678;DPRA=0;EPP=1342.81;EPPR=6649.89;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999673;PAO=0;PQA=0;PQR=0;PRO=0;QA=24195;QR=121330;RO=3061;RPL=0;RPP=1342.81;RPPR=6649.89;RPR=617;RUN=1;SAF=617;SAP=1342.81;SAR=0;SRF=3061;SRP=6649.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:523:451,72:451:17852:72:2790:-93.7941,0,-1447.87 0/1:677:533,144:533:21151:144:5593:-299.441,0,-1698.05 0/1:331:278,53:278:10919:53:2115:-90.8865,0,-882.387 0/1:687:516,171:516:20475:171:6716:-397.387,0,-1634.3 0/1:667:577,90:577:22884:90:3534:-117.33,0,-1856.9 0/1:793:706,87:706:28049:87:3447:-71.5739,0,-2283.29 dDocent_Contig_377 24 . T A 27453.5 . AB=0.597911;ABP=130.577;AC=6;AF=0.5;AN=12;AO=916;CIGAR=1X;DP=1532;DPB=1532;DPRA=0;EPP=1992.08;EPPR=1340.64;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=35683;QR=24239;RO=616;RPL=0;RPP=1992.08;RPPR=1340.64;RPR=916;RUN=1;SAF=916;SAP=1992.08;SAR=0;SRF=616;SRP=1340.64;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:134:94,40:94:3705:40:1595:-103.454,0,-293.152 0/1:201:70,131:70:2730:131:5053:-394.197,0,-185.315 0/1:316:85,231:85:3385:231:9072:-720.888,0,-209.583 0/1:263:75,188:75:2910:188:7308:-578.274,0,-182.844 0/1:295:151,144:151:5971:144:5592:-414.368,0,-448.394 0/1:323:141,182:141:5538:182:7063:-538.163,0,-401.047 dDocent_Contig_378 98 . N G 92.46 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.91202;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=99;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:99:-9.2374,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_379 11 . G A 279.247 . AB=0.09421;ABP=1460.45;AC=2;AF=0.166667;AN=12;AO=195;CIGAR=1X;DP=3111;DPB=3111;DPRA=0;EPP=23.6003;EPPR=600.949;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=59.9966;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.00446889;PAO=0;PQA=0;PQR=0;PRO=0;QA=7520;QR=110582;RO=2909;RPL=0;RPP=426.447;RPPR=6319.82;RPR=195;RUN=1;SAF=119;SAP=23.6003;SAR=76;SRF=1902;SRP=600.949;SRR=1007;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:470:455,15:455:17067:15:549:0,-91.7362,-1485.42 0/0:682:642,39:642:24157:39:1512:0,-69.0685,-2036.43 0/0:381:366,14:366:14079:14:550:0,-64.6385,-1216.48 0/0:559:524,31:524:20178:31:1189:0,-60.0482,-1707.49 0/1:392:356,36:356:13416:36:1376:-6.11255,0,-1088.86 0/1:627:566,60:566:21685:60:2344:-22.6258,0,-1761.76 dDocent_Contig_381 98 . N G 430.322 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=16;CIGAR=2X;DP=16;DPB=103.5;DPRA=0;EPP=37.7539;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=58.5625;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0.9375;PAIREDR=0;PAO=144;PQA=3902;PQR=0;PRO=0;QA=470;QR=0;RO=0;RPL=16;RPP=37.7539;RPPR=0;RPR=0;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:4:0,4:0:0:4:133:-11.9728,-1.20412,0 .:.:.:.:.:.:.:. 1|1:6:0,6:0:0:6:165:-14.8406,-1.80618,0 1|1:1:0,1:0:0:1:22:-1.97888,-0.30103,0 1|1:4:0,4:0:0:4:136:-12.2648,-1.20412,0 1|1:1:0,1:0:0:1:14:-1.25509,-0.30103,0 dDocent_Contig_383 147 . T C 156.258 . AB=0.2;ABP=34.2795;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=619;DPB=619;DPRA=0.345423;EPP=20.3821;EPPR=1329.78;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99509;PAO=0;PQA=0;PQR=0;PRO=0;QA=307;QR=23912;RO=611;RPL=0;RPP=20.3821;RPPR=1329.78;RPR=8;RUN=1;SAF=0;SAP=20.3821;SAR=8;SRF=0;SRP=1329.78;SRR=611;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:89:89,0:89:3459:0:0:0,-26.7917,-311.371 0/0:269:269,0:269:10588:0:0:0,-80.9771,-952.277 0/0:115:115,0:115:4527:0:0:0,-34.6184,-407.377 0/0:87:87,0:87:3386:0:0:0,-26.1896,-304.807 0/0:19:19,0:19:760:0:0:0,-5.71957,-68.7206 0/1:40:32,8:32:1192:8:307:-15.9446,0,-95.5077 dDocent_Contig_384 88 . T G 2097.6 . AB=0.411215;ABP=17.6627;AC=3;AF=0.25;AN=12;AO=93;CIGAR=1X;DP=373;DPB=373;DPRA=0;EPP=204.957;EPPR=611.023;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.978495;PAIREDR=0.925;PAO=0;PQA=0;PQR=0;PRO=0;QA=3232;QR=10061;RO=280;RPL=93;RPP=204.957;RPPR=611.023;RPR=0;RUN=1;SAF=93;SAP=204.957;SAR=0;SRF=280;SRP=611.023;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:32,1:32:1128:1:34:0,-6.53508,-98.4257 0/0:58:56,2:56:2020:2:72:0,-10.623,-175.231 0/1:74:47,27:47:1702:27:942:-62.8182,0,-131.187 0/0:68:66,2:66:2360:2:72:0,-13.6333,-205.818 0/1:70:31,39:31:1117:39:1347:-100.454,0,-79.7667 0/1:70:48,22:48:1734:22:765:-48.0969,0,-135.271 dDocent_Contig_385 52 . C A 33635.4 . AB=0.374419;ABP=445.322;AC=6;AF=0.5;AN=12;AO=1209;CIGAR=2X;DP=3229;DPB=3229;DPRA=0;EPP=2628.32;EPPR=4102.75;GTI=0;LEN=1;MEANALT=3.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997519;PAIREDR=0.993114;PAO=0;PQA=0;PQR=0;PRO=0;QA=47828;QR=74683;RO=1888;RPL=1209;RPP=2628.32;RPPR=4102.75;RPR=0;RUN=1;SAF=1209;SAP=2628.32;SAR=0;SRF=1888;SRP=4102.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:409:218,176:218:8610:176:6957:-506.865,0,-655.483 0|1:801:457,318:457:18073:318:12575:-897.222,0,-1391.49 0|1:451:264,174:264:10380:174:6904:-488.807,0,-801.322 0|1:654:409,221:409:16191:221:8677:-590.467,0,-1265.95 0|1:372:228,120:228:9068:120:4723:-319.845,0,-710.44 0|1:542:312,200:312:12361:200:7992:-564.334,0,-957.143 dDocent_Contig_386 12 . T A 372.659 . AB=0.0943044;ABP=1534.11;AC=2;AF=0.166667;AN=12;AO=185;CIGAR=1X;DP=3490;DPB=3490;DPRA=0.791477;EPP=404.733;EPPR=7175.38;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999394;PAO=0;PQA=0;PQR=0;PRO=0;QA=7320;QR=131285;RO=3303;RPL=0;RPP=404.733;RPPR=7175.38;RPR=185;RUN=1;SAF=185;SAP=404.733;SAR=0;SRF=3303;SRP=7175.38;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:447:402,45:402:15955:45:1792:-26.9362,0,-1300.17 0/0:621:569,52:569:22655:52:2060:0,-1.3472,-1851.44 0/0:557:524,31:524:20873:31:1218:0,-57.5798,-1766.91 0/1:624:568,56:568:22544:56:2209:-11.1429,0,-1839.2 0/0:704:704,0:704:28027:0:0:0,-211.925,-2519.95 0/0:537:536,1:536:21231:1:41:0,-157.559,-1904.94 dDocent_Contig_387 7 . T G 47870.5 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=1709;CIGAR=1X;DP=1780;DPB=1780;DPRA=0;EPP=3714.06;EPPR=139.813;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=54142;QR=945;RO=63;RPL=0;RPP=3714.06;RPPR=139.813;RPR=1709;RUN=1;SAF=1709;SAP=3714.06;SAR=0;SRF=63;SRP=139.813;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:209:8,201:8:104:201:6420:-568.345,-53.4254,0 1/1:301:13,284:13:195:284:8797:-773.945,-71.9051,0 1/1:301:7,294:7:85:294:9315:-830.449,-82.8387,0 1/1:322:13,307:13:214:307:9896:-871.042,-77.2224,0 1/1:249:8,239:8:112:239:7605:-674.231,-64.2507,0 1/1:398:14,384:14:235:384:12109:-1068.26,-98.4958,0 dDocent_Contig_388 107 . N A 133.377 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=137;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:102:-9.5168,-0.90309,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_389 1 . N A 1463.56 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=42;CIGAR=1X1M14I2M;DP=42;DPB=189;DPRA=0;EPP=94.2121;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1608;QR=0;RO=0;RPL=0;RPP=94.2121;RPPR=0;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:17:0,17:0:0:17:653:-59.1069,-5.11751,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:9:0,9:0:0:9:345:-31.4079,-2.70927,0 1|1:16:0,16:0:0:16:610:-55.239,-4.81648,0 dDocent_Contig_390 1 . N G 109.19 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.91202;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=117;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:117:-10.9104,-0.90309,0 ./.:.:.:.:.:.:.:. dDocent_Contig_391 29 . G A 139.676 . AB=0.272727;ABP=12.8806;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=174;DPB=174;DPRA=0.761905;EPP=18.2106;EPPR=365.646;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=0.857143;PAIREDR=0.634731;PAO=0;PQA=0;PQR=0;PRO=0;QA=263;QR=6560;RO=167;RPL=0;RPP=18.2106;RPPR=365.646;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=167;SRP=365.646;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:16,6:16:616:6:225:-13.9853,0,-49.1431 0/0:30:30,0:30:1173:0:0:0,-9.0309,-105.845 0/0:26:25,1:25:998:1:38:0,-4.02951,-86.32 0/0:48:48,0:48:1870:0:0:0,-14.4494,-168.503 0/0:19:19,0:19:766:0:0:0,-5.71957,-69.2587 0/0:29:29,0:29:1137:0:0:0,-8.72987,-102.612 dDocent_Contig_392 25 . C A 228.822 . AB=0.110687;ABP=347.926;AC=1;AF=0.0833333;AN=12;AO=32;CIGAR=1X;DP=1620;DPB=1620;DPRA=0.645686;EPP=72.4974;EPPR=3451.31;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1190;QR=62785;RO=1588;RPL=0;RPP=72.4974;RPPR=3451.31;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=1588;SRP=3451.31;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:195:194,1:194:7674:1:15:0,-57.2009,-688.791 0/0:259:258,1:258:10172:1:34:0,-74.5679,-911.462 0/0:197:196,1:196:7775:1:10:0,-58.3029,-698.373 0/1:262:233,29:233:9212:29:1131:-23.2009,0,-749.68 0/0:355:355,0:355:14047:0:0:0,-106.866,-1263.21 0/0:352:352,0:352:13905:0:0:0,-105.963,-1250.49 dDocent_Contig_394 91 . C T 135.294 . AB=0.170068;ABP=141.999;AC=2;AF=0.166667;AN=12;AO=26;CIGAR=1X;DP=367;DPB=367;DPRA=1.05028;EPP=59.4686;EPPR=741.311;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.961538;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=667;QR=11403;RO=340;RPL=26;RPP=59.4686;RPPR=741.311;RPR=0;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=340;SRP=741.311;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:1000:0:0:0,-8.72987,-90.3121 0/1:56:43,12:43:1457:12:282:-8.97378,0,-114.791 0/0:41:40,1:40:1361:1:24:0,-9.94234,-120.387 0/0:90:90,0:90:3012:0:0:0,-27.0927,-271.322 0/0:60:60,0:60:1995:0:0:0,-18.0618,-179.821 0/1:91:78,13:78:2578:13:361:-5.36925,0,-204.878 dDocent_Contig_395 141 . G T 793.397 . AB=0.150289;ABP=370.554;AC=3;AF=0.25;AN=12;AO=54;CIGAR=1X;DP=863;DPB=863;DPRA=0.487414;EPP=120.27;EPPR=1757.56;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=59.8762;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.894802;PAO=0;PQA=0;PQR=0;PRO=0;QA=2127;QR=31793;RO=808;RPL=0;RPP=120.27;RPPR=1757.56;RPR=54;RUN=1;SAF=0;SAP=120.27;SAR=54;SRF=0;SRP=1757.56;SRR=808;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:80:78,2:78:3067:2:80:0,-16.4906,-268.529 0/1:132:112,20:112:4418:20:806:-33.1218,0,-357.837 0/1:58:50,7:50:2005:7:258:-6.01756,0,-163.081 0/1:156:131,25:131:5166:25:983:-41.8098,0,-415.154 0/0:213:213,0:213:8301:0:0:0,-64.1194,-745.019 0/0:224:224,0:224:8836:0:0:0,-67.4307,-794.742 dDocent_Contig_396 72 . G A 41.8687 . AB=0.106667;ABP=103.796;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=375;DPB=375;DPRA=1.56044;EPP=33.4109;EPPR=786.912;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.928571;PAIREDR=0.908587;PAO=0;PQA=0;PQR=0;PRO=0;QA=519;QR=13147;RO=361;RPL=14;RPP=33.4109;RPPR=786.912;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=361;SRP=786.912;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:31,2:31:1062:2:79:0,-2.43675,-88.3649 0/0:99:97,2:97:3478:2:67:0,-23.4405,-306.83 0/0:39:39,0:39:1504:0:0:0,-11.7402,-135.626 0/0:77:75,2:75:2718:2:76:0,-15.9646,-237.605 0/0:52:52,0:52:1891:0:0:0,-15.6536,-170.442 0/1:75:67,8:67:2494:8:297:-4.50556,0,-202.101 dDocent_Contig_397 19 . C T 1381.78 . AB=0.131414;ABP=945.851;AC=2;AF=0.166667;AN=12;AO=105;CIGAR=1X;DP=1632;DPB=1632;DPRA=1.91837;EPP=231.015;EPPR=3318.85;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.99738;PAO=0;PQA=0;PQR=0;PRO=0;QA=4213;QR=61333;RO=1527;RPL=0;RPP=231.015;RPPR=3318.85;RPR=105;RUN=1;SAF=105;SAP=231.015;SAR=0;SRF=1527;SRP=3318.85;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:142:142,0:142:5698:0:0:0,-42.7463,-512.61 0/0:240:240,0:240:9623:0:0:0,-72.2472,-865.449 0/0:183:183,0:183:7336:0:0:0,-55.0885,-659.84 0/0:268:268,0:268:10800:0:0:0,-80.676,-971.235 0/1:401:359,42:359:14410:42:1691:-31.6919,0,-1175.03 0/1:398:335,63:335:13466:63:2522:-107.3,0,-1091.06 dDocent_Contig_398 107 . N C 308.593 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=12;CIGAR=1X;DP=12;DPB=12;DPRA=0;EPP=29.068;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=329;QR=0;RO=0;RPL=0;RPP=29.068;RPPR=0;RPR=12;RUN=1;SAF=0;SAP=29.068;SAR=12;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:18:-1.79997,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:9:0,9:0:0:9:251:-22.8638,-2.70927,0 1/1:2:0,2:0:0:2:60:-5.69915,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_399 90 . C A 140.039 . AB=0.125926;ABP=167.093;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=1X;DP=828;DPB=828;DPRA=0.825939;EPP=57.2971;EPPR=1746.7;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=892;QR=27383;RO=803;RPL=25;RPP=57.2971;RPPR=1746.7;RPR=0;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=803;SRP=1746.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:87:87,0:87:2951:0:0:0,-26.1896,-265.835 0/0:125:125,0:125:4206:0:0:0,-37.6287,-378.743 0/0:220:220,0:220:7555:0:0:0,-66.2266,-680.043 0/0:154:154,0:154:5234:0:0:0,-46.3586,-471.229 0/0:107:99,8:99:3382:8:285:0,-6.21558,-278.617 0/1:135:118,17:118:4055:17:607:-14.3227,0,-324.52 dDocent_Contig_400 9 . G C 560.652 . AB=0.230088;ABP=74.5152;AC=1;AF=0.0833333;AN=12;AO=26;CIGAR=1X;DP=452;DPB=452;DPRA=1.66667;EPP=59.4686;EPPR=925.886;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1001;QR=16289;RO=425;RPL=0;RPP=59.4686;RPPR=925.886;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=425;SRP=925.886;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:51:51,0:51:1965:0:0:0,-15.3525,-177.089 0/0:84:84,0:84:3200:0:0:0,-25.2865,-288.154 0/0:35:35,0:35:1346:0:0:0,-10.536,-121.425 0/0:101:100,0:100:3835:0:0:0,-30.103,-344.862 0/1:113:87,26:87:3351:26:1001:-56.3839,0,-267.706 0/0:68:68,0:68:2592:0:0:0,-20.47,-233.477 dDocent_Contig_401 17 . T A 3793.7 . AB=0.140212;ABP=2128.07;AC=2;AF=0.166667;AN=12;AO=322;CIGAR=1X;DP=4955;DPB=4955;DPRA=0.975563;EPP=702.224;EPPR=10054.8;GTI=0;LEN=1;MEANALT=1.6;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=12833;QR=185258;RO=4629;RPL=0;RPP=702.224;RPPR=10054.8;RPR=322;RUN=1;SAF=322;SAP=702.224;SAR=0;SRF=4629;SRP=10054.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:748:724,24:724:29023:24:963:0,-138.199,-2522.41 0/1:964:779,183:779:31149:183:7285:-365.3,0,-2510.52 0/0:431:404,27:404:16198:27:1087:0,-31.6291,-1358.37 0/1:926:844,82:844:33766:82:3262:-14.8831,0,-2757 0/0:843:843,0:843:33730:0:0:0,-253.768,-3032.53 0/0:1043:1035,6:1035:41392:6:236:0,-292.152,-3699.67 dDocent_Contig_402 77 . T A 1050.06 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=34;CIGAR=1X;DP=34;DPB=34;DPRA=0;EPP=76.8404;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1182;QR=0;RO=0;RPL=34;RPP=76.8404;RPPR=0;RPR=0;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:5:0,5:0:0:5:154:-13.7378,-1.50515,0 1/1:5:0,5:0:0:5:177:-15.6831,-1.50515,0 1/1:5:0,5:0:0:5:160:-14.283,-1.50515,0 1/1:11:0,11:0:0:11:401:-34.8462,-3.31133,0 1/1:1:0,1:0:0:1:37:-3.52359,-0.30103,0 1/1:7:0,7:0:0:7:253:-22.1471,-2.10721,0 dDocent_Contig_403 39 . T C 2066.32 . AB=0.311024;ABP=81.7988;AC=5;AF=0.416667;AN=12;AO=79;CIGAR=1X;DP=330;DPB=330;DPRA=0.668421;EPP=174.557;EPPR=545.878;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.911392;PAIREDR=0.872;PAO=0;PQA=0;PQR=0;PRO=0;QA=3162;QR=10062;RO=250;RPL=0;RPP=174.557;RPPR=545.878;RPR=79;RUN=1;SAF=79;SAP=174.557;SAR=0;SRF=250;SRP=545.878;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:30,7:30:1223:7:286:-14.9767,0,-99.1983 0/1:82:53,29:53:2123:29:1149:-79.0087,0,-166.561 0/1:35:23,12:23:931:12:488:-33.7354,0,-73.5561 0/1:65:41,23:41:1669:23:919:-63.4813,0,-130.907 0/1:35:27,8:27:1095:8:320:-18.6307,0,-88.2972 0/0:76:76,0:76:3021:0:0:0,-22.8783,-271.957 dDocent_Contig_404 22 . G C 1425.48 . AB=0.145833;ABP=735.158;AC=2;AF=0.166667;AN=12;AO=154;CIGAR=1X;DP=2764;DPB=2764;DPRA=0.603488;EPP=337.417;EPPR=5668.38;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6071;QR=103590;RO=2609;RPL=0;RPP=337.417;RPPR=5668.38;RPR=154;RUN=1;SAF=154;SAP=337.417;SAR=0;SRF=2609;SRP=5668.38;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:274:253,20:253:10086:20:789:0,-10.9666,-835.77 0/1:313:258,55:258:10295:55:2146:-99.097,0,-831.64 0/0:225:216,9:216:8601:9:363:0,-34.6975,-740.554 0/1:359:316,43:316:12621:43:1690:-44.2649,0,-1026.9 0/0:905:878,27:878:34791:27:1083:0,-174.677,-3030.26 0/0:688:688,0:688:27196:0:0:0,-207.109,-2445.22 dDocent_Contig_407 64 . A G 30.7311 . AB=0.0961538;ABP=76.6733;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=387;DPB=387;DPRA=1.29167;EPP=31.2394;EPPR=815.141;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.692308;PAIREDR=0.743316;PAO=0;PQA=0;PQR=0;PRO=0;QA=520;QR=14758;RO=374;RPL=13;RPP=31.2394;RPPR=815.141;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=374;SRP=815.141;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:52:47,5:47:1843:5:204:-3.09047,0,-150.434 0/0:78:77,1:77:3034:1:38:0,-19.6831,-269.357 0/0:46:46,0:46:1843:0:0:0,-13.8474,-166.078 0/0:86:81,5:81:3209:5:196:0,-7.87634,-270.873 0/0:63:61,2:61:2394:2:82:0,-11.1852,-207.837 0/0:62:62,0:62:2435:0:0:0,-18.6639,-219.305 dDocent_Contig_408 28 . T A 51.1196 . AB=0.0909091;ABP=290.829;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=1827;DPB=1827;DPRA=0.607735;EPP=42.0968;EPPR=3926.86;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9989;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999447;PAO=0;PQA=0;PQR=0;PRO=0;QA=719;QR=72543;RO=1807;RPL=0;RPP=42.0968;RPPR=3926.86;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=1807;SRP=3926.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:274:274,0:274:10966:0:0:0,-82.4822,-986.17 0/1:198:180,18:180:7245:18:719:-5.43072,0,-592.065 0/0:147:147,0:147:5949:0:0:0,-44.2514,-535.157 0/0:252:252,0:252:10107:0:0:0,-75.8596,-908.949 0/0:513:513,0:513:20615:0:0:0,-154.428,-1853.53 0/0:443:441,0:441:17661:0:0:0,-132.754,-1587.61 dDocent_Contig_409 39 . A G 73.8916 . AB=0.0923913;ABP=534.077;AC=4;AF=0.333333;AN=12;AO=34;CIGAR=1X;DP=564;DPB=564;DPRA=0.938776;EPP=76.8404;EPPR=1149.55;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.882353;PAIREDR=0.861742;PAO=0;PQA=0;PQR=0;PRO=0;QA=1323;QR=21012;RO=528;RPL=0;RPP=76.8404;RPPR=1149.55;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=528;SRP=1149.55;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:67:61,6:61:2449:6:241:-1.89729,0,-200.389 0/1:105:94,11:94:3683:11:409:-5.53172,0,-299.902 0/1:81:74,7:74:2939:7:282:-1.36953,0,-240.23 0/1:115:105,10:105:4198:10:391:-0.923382,0,-343.162 0/0:94:93,0:93:3718:0:0:0,-27.9958,-334.543 0/0:102:101,0:101:4025:0:0:0,-30.404,-362.088 dDocent_Contig_410 107 . N G 3793.53 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=129;CIGAR=1X;DP=131;DPB=131;DPRA=0;EPP=283.13;EPPR=0;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.992248;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4192;QR=0;RO=0;RPL=0;RPP=283.13;RPPR=0;RPR=129;RUN=1;SAF=0;SAP=283.13;SAR=129;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:9:0,8:0:0:8:239:-21.6444,-2.40824,0 1/1:15:0,15:0:0:15:455:-41.2411,-4.51545,0 1/1:9:0,9:0:0:9:302:-27.5053,-2.70927,0 1/1:21:0,21:0:0:21:716:-64.7576,-6.32163,0 1/1:73:0,73:0:0:73:2397:-215.981,-21.9752,0 1/1:4:0,3:0:0:3:83:-7.4431,-0.90309,0 dDocent_Contig_411 98 . N T 340.328 . AB=0;ABP=0;AC=10;AF=0.833333;AN=12;AO=12;CIGAR=1X;DP=13;DPB=13;DPRA=2.4;EPP=29.068;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=353;QR=0;RO=0;RPL=12;RPP=29.068;RPPR=0;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:91:-8.49142,-0.90309,0 0/0:1:0,0:0:0:0:0:0,0,0 1/1:1:0,1:0:0:1:18:-1.79997,-0.30103,0 1/1:2:0,2:0:0:2:64:-6.07837,-0.60206,0 1/1:3:0,3:0:0:3:89:-8.30504,-0.90309,0 1/1:3:0,3:0:0:3:91:-8.49142,-0.90309,0 dDocent_Contig_412 50 . G T 1260.18 . AB=0.182825;ABP=318.451;AC=4;AF=0.333333;AN=12;AO=71;CIGAR=1X;DP=539;DPB=539;DPRA=1.65862;EPP=157.185;EPPR=1019.26;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.760563;PAIREDR=0.769231;PAO=0;PQA=0;PQR=0;PRO=0;QA=2824;QR=18515;RO=468;RPL=71;RPP=157.185;RPPR=1019.26;RPR=0;RUN=1;SAF=71;SAP=157.185;SAR=0;SRF=468;SRP=1019.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:58:58,0:58:2275:0:0:0,-17.4597,-204.917 0/0:120:115,5:115:4556:5:204:0,-17.3796,-391.234 0/1:77:64,13:64:2513:13:523:-24.2382,0,-203.142 0/1:85:76,9:76:3007:9:344:-5.7207,0,-245.126 0/1:65:57,8:57:2269:8:304:-8.14664,0,-184.805 0/1:134:98,36:98:3895:36:1449:-90.3183,0,-310.209 dDocent_Contig_413 98 . N T 128.873 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=127;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:63:-5.98364,-0.60206,0 dDocent_Contig_414 57 . T C 35407.1 . AB=0.306583;ABP=1444.45;AC=6;AF=0.5;AN=12;AO=1360;CIGAR=1X;DP=4436;DPB=4436;DPRA=0;EPP=2956.21;EPPR=6591.26;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998682;PAO=0;PQA=0;PQR=0;PRO=0;QA=54137;QR=120438;RO=3034;RPL=1360;RPP=2956.21;RPPR=6591.26;RPR=0;RUN=1;SAF=1360;SAP=2956.21;SAR=0;SRF=3034;SRP=6591.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:591:500,90:500:19774:90:3577:-143.948,0,-1600.06 0/1:792:541,230:541:21486:230:9100:-585.966,0,-1699.45 0/1:760:533,227:533:21169:227:9102:-589.821,0,-1674.63 0/1:651:337,295:337:13323:295:11764:-867.285,0,-1007.48 0/1:817:573,244:573:22810:244:9705:-626.898,0,-1805 0/1:825:550,274:550:21876:274:10889:-730.794,0,-1718.52 dDocent_Contig_416 26 . A C 705.484 . AB=0.268519;ABP=53.2759;AC=3;AF=0.25;AN=12;AO=29;CIGAR=1X;DP=447;DPB=447;DPRA=0.318584;EPP=65.983;EPPR=910.686;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1151;QR=16582;RO=418;RPL=0;RPP=65.983;RPPR=910.686;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=418;SRP=910.686;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:56:56,0:56:2201:0:0:0,-16.8577,-198.274 0/1:56:33,23:33:1310:23:911:-65.4361,0,-101.312 0/1:26:23,3:23:925:3:120:-3.36091,0,-75.7286 0/1:26:23,3:23:928:3:120:-3.36053,0,-75.9966 0/0:148:148,0:148:5859:0:0:0,-44.5524,-527.135 0/0:135:135,0:135:5359:0:0:0,-40.639,-482.172 dDocent_Contig_417 119 . G C 227.964 . AB=0.158879;ABP=111.158;AC=3;AF=0.25;AN=12;AO=21;CIGAR=1X;DP=243;DPB=243;DPRA=0.930233;EPP=48.6112;EPPR=485.077;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.952381;PAIREDR=0.855856;PAO=0;PQA=0;PQR=0;PRO=0;QA=764;QR=8006;RO=222;RPL=0;RPP=48.6112;RPPR=485.077;RPR=21;RUN=1;SAF=0;SAP=48.6112;SAR=21;SRF=0;SRP=485.077;SRR=222;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:32,6:32:1168:6:216:-8.35041,0,-93.9881 0/1:39:31,8:31:1141:8:291:-14.7993,0,-91.2591 0/0:43:43,0:43:1564:0:0:0,-12.9443,-141.047 0/0:40:37,3:37:1334:3:110:0,-1.78019,-110.093 0/1:30:27,3:27:947:3:110:-1.2301,0,-76.5098 0/0:53:52,1:52:1852:1:37:0,-12.2568,-163.256 dDocent_Contig_418 109 . G A 13762 . AB=0.264074;ABP=1308.37;AC=6;AF=0.5;AN=12;AO=713;CIGAR=1X;DP=2700;DPB=2700;DPRA=0;EPP=1551.27;EPPR=4311.21;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997195;PAIREDR=0.99748;PAO=0;PQA=0;PQR=0;PRO=0;QA=24351;QR=67711;RO=1984;RPL=0;RPP=1551.27;RPPR=4311.21;RPR=713;RUN=1;SAF=0;SAP=1551.27;SAR=713;SRF=0;SRP=4311.21;SRR=1984;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:376:294,81:294:10082:81:2796:-138.657,0,-794.151 0/1:518:356,161:356:12069:161:5497:-338.912,0,-930.174 0/1:229:172,57:172:5880:57:1953:-107.113,0,-460.41 0/1:498:359,138:359:12273:138:4749:-277.912,0,-954.824 0/1:460:297,163:297:10139:163:5528:-359.207,0,-774.045 0/1:619:506,113:506:17268:113:3828:-158.394,0,-1367.56 dDocent_Contig_419 107 . N G 416.861 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=14;CIGAR=1X;DP=14;DPB=14;DPRA=0;EPP=33.4109;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=438;QR=0;RO=0;RPL=0;RPP=33.4109;RPPR=0;RPR=14;RUN=1;SAF=0;SAP=33.4109;SAR=14;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:116:-10.7286,-1.20412,0 1/1:3:0,3:0:0:3:103:-9.60997,-0.90309,0 1/1:1:0,1:0:0:1:30:-2.99957,-0.30103,0 1/1:3:0,3:0:0:3:93:-8.67818,-0.90309,0 1/1:3:0,3:0:0:3:96:-8.95781,-0.90309,0 ./.:.:.:.:.:.:.:. dDocent_Contig_420 15 . T C 163.065 . AB=0.139241;ABP=92.3155;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=253;DPB=253;DPRA=0.9375;EPP=35.5824;EPPR=519.821;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.866667;PAIREDR=0.705882;PAO=0;PQA=0;PQR=0;PRO=0;QA=599;QR=9515;RO=238;RPL=0;RPP=35.5824;RPPR=519.821;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=238;SRP=519.821;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:35,6:35:1419:6:241:-9.72424,0,-115.615 0/1:38:33,5:33:1327:5:205:-7.39587,0,-108.252 0/0:40:39,1:39:1577:1:31:0,-8.94175,-139.06 0/0:46:43,3:43:1714:3:122:0,-2.47489,-143.1 0/0:41:41,0:41:1607:0:0:0,-12.3422,-144.858 0/0:47:47,0:47:1871:0:0:0,-14.1484,-168.587 dDocent_Contig_421 22 . T C 1389.58 . AB=0.120799;ABP=1378.13;AC=2;AF=0.166667;AN=12;AO=231;CIGAR=1X;DP=3621;DPB=3621;DPRA=0;EPP=504.62;EPPR=7362.13;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.99823;PAO=0;PQA=0;PQR=0;PRO=0;QA=9074;QR=134298;RO=3389;RPL=0;RPP=504.62;RPPR=7362.13;RPR=231;RUN=1;SAF=231;SAP=504.62;SAR=0;SRF=3389;SRP=7362.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:460:414,46:414:16351:46:1803:-24.0159,0,-1331.91 0/1:641:553,87:553:22018:87:3427:-115.755,0,-1787.03 0/0:383:351,32:351:13949:32:1261:0,-1.53059,-1140.65 0/0:616:567,49:567:22544:49:1937:0,-10.8921,-1852.56 0/0:760:746,14:746:29446:14:529:0,-180.844,-2599.65 0/0:761:758,3:758:29990:3:117:0,-218.175,-2685.57 dDocent_Contig_422 62 . T C 38.0201 . AB=0.103896;ABP=107.946;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=269;DPB=269;DPRA=0.802083;EPP=20.3821;EPPR=567.593;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.919231;PAO=0;PQA=0;PQR=0;PRO=0;QA=301;QR=9751;RO=260;RPL=8;RPP=20.3821;RPPR=567.593;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=260;SRP=567.593;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:48,0:48:1741:0:0:0,-14.4494,-156.966 0/0:50:50,0:50:1837:0:0:0,-15.0515,-165.601 0/0:47:47,0:47:1777:0:0:0,-14.1484,-160.18 0/0:47:47,0:47:1807:0:0:0,-14.1484,-162.881 0/1:25:22,3:22:837:3:116:-3.29195,0,-68.1257 0/1:52:46,5:46:1752:5:185:-1.30134,0,-142.233 dDocent_Contig_423 16 . A G 2207.17 . AB=0.192644;ABP=471.535;AC=5;AF=0.416667;AN=12;AO=110;CIGAR=1X2M1X2M1X2M1X1M1X;DP=597;DPB=597;DPRA=4.39231;EPP=241.872;EPPR=975.83;GTI=0;LEN=1;MEANALT=2.8;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4281;QR=17469;RO=448;RPL=0;RPP=241.872;RPPR=975.83;RPR=110;RUN=1;SAF=110;SAP=241.872;SAR=0;SRF=448;SRP=975.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:60:48,0,7,5:48:1865:0,7,5:0,270,194:-7.72162,-22.1711,-175.42,0,-153.248,-151.141,-6.23213,-159.482,-137.31,-157.977 0|1:177:128,12,36,0:128:4995:12,36,0:457,1400,0:-76.5169,-77.5682,-484.557,0,-373.125,-399.77,-115.049,-488.169,-410.607,-525.651 0|1:97:81,0,14,0:81:3156:0,14,0:0,556,0:-21.3841,-45.7675,-305.142,0,-259.367,-255.153,-45.7675,-305.142,-259.367,-305.142 0|1:162:120,9,32,0:120:4690:9,32,0:342,1252,0:-66.8448,-74.9232,-457.792,0,-357.561,-375.974,-102.968,-460.501,-385.607,-488.547 0|0:26:23,2,0,0:23:888:2,0,0:76,0,0:0,-0.504315,-73.0972,-6.92369,-73.6992,-79.9326,-6.92369,-73.6992,-79.9326,-79.9326 0|1:75:48,5,21,0:48:1875:5,21,0:181,803,0:-51.4473,-51.1258,-203.765,0,-139.387,-147.837,-65.8968,-205.27,-154.159,-220.043 dDocent_Contig_424 46 . G C 1036.18 . AB=0.35514;ABP=22.513;AC=1;AF=0.0833333;AN=12;AO=38;CIGAR=1X;DP=337;DPB=337;DPRA=2.32609;EPP=85.5263;EPPR=650.109;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1510;QR=11777;RO=298;RPL=0;RPP=85.5263;RPPR=650.109;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=298;SRP=650.109;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:735:0:0:0,-5.71957,-66.4615 0/0:57:57,0:57:2240:0:0:0,-17.1587,-201.775 0/0:27:27,0:27:1091:0:0:0,-8.12781,-98.4747 0/0:44:44,0:44:1727:0:0:0,-13.2453,-155.651 0/1:107:69,38:69:2743:38:1510:-103.937,0,-214.777 0/0:83:82,0:82:3241:0:0:0,-24.6845,-291.397 dDocent_Contig_426 59 . A T 5094.14 . AB=0.223485;ABP=704.33;AC=4;AF=0.333333;AN=12;AO=250;CIGAR=1X;DP=1322;DPB=1322;DPRA=0;EPP=545.878;EPPR=2324.31;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.992;PAIREDR=0.994387;PAO=0;PQA=0;PQR=0;PRO=0;QA=9782;QR=42079;RO=1069;RPL=250;RPP=545.878;RPPR=2324.31;RPR=0;RUN=1;SAF=250;SAP=545.878;SAR=0;SRF=1069;SRP=2324.31;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:157:146,11:146:5778:11:448:0,-6.58594,-479.172 0/1:238:209,29:209:8147:29:1088:-26.5383,0,-661.198 0/0:109:104,3:104:4134:3:121:0,-21.3279,-360.752 0/1:242:210,31:210:8204:31:1150:-30.8455,0,-665.039 0/1:277:178,99:178:7015:99:3930:-270.313,0,-547.672 0/1:299:222,77:222:8801:77:3045:-184.122,0,-701.589 dDocent_Contig_427 98 . N T 133.178 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=137;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:105:-9.79616,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_428 98 . N A 250.82 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=254;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:2:0,2:0:0:2:52:-4.93868,-0.60206,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:3:0,3:0:0:3:64:-5.97203,-0.90309,0 dDocent_Contig_429 24 . T C 936.343 . AB=0.130125;ABP=669.645;AC=4;AF=0.333333;AN=12;AO=89;CIGAR=1X;DP=838;DPB=838;DPRA=0;EPP=196.271;EPPR=1627.27;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.842697;PAIREDR=0.997326;PAO=0;PQA=0;PQR=0;PRO=0;QA=3574;QR=29396;RO=748;RPL=0;RPP=196.271;RPPR=1627.27;RPR=89;RUN=1;SAF=89;SAP=196.271;SAR=0;SRF=748;SRP=1627.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:112:101,10:101:4020:10:402:-2.74273,0,-327.992 0/0:150:141,9:141:5496:9:359:0,-12.4814,-461.84 0/1:94:73,21:73:2839:21:842:-47.7954,0,-227.314 0/0:127:120,7:120:4680:7:285:0,-12.2064,-395.111 0/1:163:140,23:140:5497:23:924:-34.3975,0,-445.505 0/1:192:173,19:173:6864:19:762:-11.1032,0,-559.671 dDocent_Contig_430 1 . N G 1334.51 . AB=0.333333;ABP=15.3153;AC=12;AF=1;AN=12;AO=19;CIGAR=1X4M;DP=74;DPB=74;DPRA=0;EPP=36.0395;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=31.9474;MQMR=0;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=570;QR=0;RO=0;RPL=0;RPP=44.2683;RPPR=0;RPR=19;RUN=1;SAF=1;SAP=36.0395;SAR=18;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:12:0,6,6:0:0:6,6:208,151:-18.8481,-10.8079,-9.00174,-8.24624,0,-6.44006 1|1:19:0,14,5:0:0:14,5:461,154:-41.0346,-11.2789,-7.06453,-30.0314,0,-28.5262 1|1:10:0,6,4:0:0:6,4:201,138:-20.5641,-11.0706,-9.26443,-9.77674,0,-8.57262 1|1:23:0,21,2:0:0:21,2:704,58:-37.077,-6.32163,0,-32.9949,-1.98513,-32.3929 1|1:8:0,7,1:0:0:7,1:231,34:-13.7525,-2.79803,-0.690816,-11.2518,0,-10.9507 1|1:2:0,1,1:0:0:1,1:34,35:-5.21452,-2.89801,-2.59698,-2.62265,0,-2.32162 dDocent_Contig_431 53 . T A 1547.08 . AB=0.208791;ABP=271.127;AC=4;AF=0.333333;AN=12;AO=86;CIGAR=1X;DP=529;DPB=529;DPRA=0;EPP=189.757;EPPR=964.973;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.965116;PAIREDR=0.914221;PAO=0;PQA=0;PQR=0;PRO=0;QA=3338;QR=17079;RO=443;RPL=86;RPP=189.757;RPPR=964.973;RPR=0;RUN=1;SAF=86;SAP=189.757;SAR=0;SRF=443;SRP=964.973;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:82:78,4:78:3006:4:154:0,-10.455,-256.45 0/1:135:108,27:108:4186:27:986:-48.3786,0,-336.134 0/1:48:41,7:41:1606:7:283:-11.3941,0,-130.34 0/1:112:90,22:90:3443:22:883:-46.0658,0,-276.261 0/1:69:49,20:49:1893:20:797:-51.2747,0,-149.826 0/0:83:77,6:77:2945:6:235:0,-3.46567,-243.665 dDocent_Contig_432 28 . C A 8027.19 . AB=0.0594966;ABP=739.547;AC=0;AF=0;AN=12;AO=26;CIGAR=1X1M1X;DP=1232;DPB=1232;DPRA=0;EPP=59.4686;EPPR=1742.36;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1013;QR=31512;RO=801;RPL=0;RPP=59.4686;RPPR=1742.36;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=801;SRP=1742.36;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:184:152,0,0,32:152:5971:0,0,32:0,0,1282:-60.2583,-106.015,-597.094,-106.015,-597.094,-597.094,0,-491.478,-491.478,-481.845 0|0:204:178,0,0,26:178:7049:0,0,26:0,0,1034:-31.9462,-85.5295,-665.675,-85.5295,-665.675,-665.675,0,-580.542,-580.542,-572.715 0|0:121:75,0,0,46:75:2999:0,0,46:0,0,1797:-125.516,-148.093,-395.126,-148.093,-395.126,-395.126,0,-247.427,-247.427,-233.58 0|0:286:216,0,16,54:216:8468:0,16,54:0,631,2106:-108.058,-173.08,-869.396,-121.17,-817.487,-812.67,0,-696.313,-644.404,-680.058 0|0:197:73,12,40,72:73:2858:12,40,72:477,1606,2842:-211.835,-194.538,-425.913,-101.476,-297.191,-324.423,0,-195.712,-102.649,-213.31 0|0:240:107,14,25,93:107:4167:14,25,93:536,1004,3663:-269.104,-257.335,-595.549,-218.583,-517.032,-553.486,0,-298.447,-259.695,-314.431 dDocent_Contig_433 18 . C A 5312.34 . AB=0.731602;ABP=110.634;AC=2;AF=0.166667;AN=12;AO=169;CIGAR=1X;DP=597;DPB=597;DPRA=1.2623;EPP=369.989;EPPR=932.4;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997664;PAO=0;PQA=0;PQR=0;PRO=0;QA=6683;QR=17230;RO=428;RPL=0;RPP=369.989;RPPR=932.4;RPR=169;RUN=1;SAF=169;SAP=369.989;SAR=0;SRF=428;SRP=932.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:40,0:40:1615:0:0:0,-12.0412,-145.576 0/0:95:95,0:95:3817:0:0:0,-28.5978,-343.517 0/0:127:127,0:127:5107:0:0:0,-38.2308,-459.48 0/0:104:104,0:104:4178:0:0:0,-31.3071,-375.981 0/1:117:16,101:16:645:101:3970:-322.079,0,-23.1639 0/1:114:46,68:46:1868:68:2713:-209.969,0,-133.998 dDocent_Contig_434 22 . A C 305.949 . AB=0.152;ABP=134.497;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1X;DP=973;DPB=973;DPRA=0.737028;EPP=44.2683;EPPR=2074.59;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.997904;PAO=0;PQA=0;PQR=0;PRO=0;QA=758;QR=37691;RO=954;RPL=0;RPP=44.2683;RPPR=2074.59;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=954;SRP=2074.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:124:124,0:124:4894:0:0:0,-37.3277,-440.372 0/1:125:106,19:106:4189:19:758:-30.9137,0,-339.367 0/0:248:248,0:248:9804:0:0:0,-74.6554,-881.792 0/0:111:111,0:111:4358:0:0:0,-33.4143,-392.194 0/0:185:185,0:185:7283:0:0:0,-55.6905,-655.151 0/0:180:180,0:180:7163:0:0:0,-54.1854,-644.34 dDocent_Contig_435 9 . G A 1319.94 . AB=0.428571;ABP=7.97367;AC=1;AF=0.0833333;AN=12;AO=48;CIGAR=1X;DP=480;DPB=480;DPRA=1.52174;EPP=107.241;EPPR=676.348;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.898148;PAO=0;PQA=0;PQR=0;PRO=0;QA=1842;QR=16274;RO=432;RPL=0;RPP=107.241;RPPR=941.086;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=399;SRP=676.348;SRR=33;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:43:43,0:43:1622:0:0:0,-12.9443,-146.247 0/0:62:62,0:62:2320:0:0:0,-18.6639,-209.026 0/0:137:137,0:137:5186:0:0:0,-41.2411,-466.757 0/0:52:52,0:52:1960:0:0:0,-15.6536,-176.641 0/0:74:74,0:74:2789:0:0:0,-22.2762,-251.199 0/1:112:64,48:64:2397:48:1842:-132.312,0,-182.23 dDocent_Contig_436 41 . T C 487.912 . AB=0.181159;ABP=124.865;AC=2;AF=0.166667;AN=12;AO=31;CIGAR=1X;DP=494;DPB=494;DPRA=0.897778;EPP=70.3259;EPPR=1008.4;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.974082;PAO=0;PQA=0;PQR=0;PRO=0;QA=1251;QR=18629;RO=463;RPL=0;RPP=70.3259;RPPR=1008.4;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=463;SRP=1008.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:90:90,0:90:3640:0:0:0,-27.0927,-327.604 0/0:95:94,1:94:3781:1:41:0,-24.5033,-336.187 0/1:42:35,7:35:1405:7:283:-13.1997,0,-114.052 0/1:96:78,18:78:3107:18:722:-36.405,0,-250.807 0/0:85:84,1:84:3364:1:41:0,-21.493,-298.708 0/0:86:82,4:82:3332:4:164:0,-10.7387,-284.761 dDocent_Contig_437 106 . N T 538.117 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=18;CIGAR=2X;DP=19;DPB=19;DPRA=0;EPP=42.0968;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=45.2222;MQMR=0;NS=6;NUMALT=1;ODDS=4.33681e-19;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=611;QR=0;RO=0;RPL=0;RPP=42.0968;RPPR=0;RPR=18;RUN=1;SAF=0;SAP=42.0968;SAR=18;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:5:0,5:0:0:5:169:-15.4968,-1.50515,0 1|1:3:0,2:0:0:2:68:-6.2199,-0.60206,0 1|1:2:0,2:0:0:2:68:-6.43901,-0.60206,0 1|1:5:0,5:0:0:5:170:-15.5878,-1.50515,0 1|1:1:0,1:0:0:1:34:-3.39142,-0.30103,0 1|1:3:0,3:0:0:3:102:-5.82002,-0.90309,0 dDocent_Contig_444 8 . T G 6309.03 . AB=0.7307;ABP=260.503;AC=9;AF=0.75;AN=12;AO=873;CIGAR=1X4M;DP=1142;DPB=1142;DPRA=0;EPP=1695.98;EPPR=226.672;GTI=0;LEN=1;MEANALT=5.66667;MQM=14.4822;MQMR=49.6602;NS=6;NUMALT=3;ODDS=0;PAIRED=0.197022;PAIREDR=0.0485437;PAO=0;PQA=0;PQR=0;PRO=0;QA=12176;QR=4020;RO=103;RPL=0;RPP=1898.71;RPPR=226.672;RPR=873;RUN=1;SAF=849;SAP=1695.98;SAR=24;SRF=103;SRP=226.672;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:177:13,9,146,0:13:510:9,146,0:354,1723,0:-85.2596,-72.1617,-104.232,-9.10823,-26.9371,0,-89.1729,-106.941,-43.9504,-123.951 0|1:308:36,23,226,5:36:1413:23,226,5:877,3528,195:-189.459,-153.134,-242.322,0,-48.9956,-28.1185,-190.781,-239.732,-86.6389,-285.385 1|1:213:14,26,162,4:14:547:26,162,4:999,2484,159:-143.408,-103.047,-135.615,-8.34752,-4.22506,0,-141.745,-137.564,-42.8944,-180.933 1|1:195:17,11,158,4:17:653:11,158,4:430,1910,156:-87.7517,-70.0462,-111.172,-3.09106,-24.7479,0,-86.7729,-108.388,-41.4753,-130.005 0|1:91:8,7,72,0:8:308:7,72,0:270,916,0:-42.566,-37.1557,-60.3627,0,-17.6254,-3.71168,-44.9742,-62.4699,-25.3858,-70.286 0|1:158:15,7,109,13:15:589:7,109,13:273,1615,510:-84.0685,-85.5835,-131.933,0,-45.5252,-15.6914,-64.6234,-110.083,-24.5503,-109.17 dDocent_Contig_447 98 . N A 100.327 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=2X;DP=5;DPB=123.5;DPRA=4;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=109;PQA=2026;PQR=0;PRO=0;QA=106;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:4:0,4:0:0:4:106:-9.41252,-1.20412,0 .:.:.:.:.:.:.:. 1|1:1:0,0:0:0:0:0:0,0,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_448 17 . C A 140690 . AB=0.670178;ABP=1005.93;AC=8;AF=0.666667;AN=12;AO=4411;CIGAR=1X;DP=5874;DPB=5874;DPRA=0;EPP=9581.38;EPPR=3164.67;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=175536;QR=58332;RO=1456;RPL=0;RPP=9581.38;RPPR=3164.67;RPR=4411;RUN=1;SAF=4411;SAP=9581.38;SAR=0;SRF=1456;SRP=3164.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:884:136,748:136:5456:748:29754:-2409.07,0,-224.752 1/1:1123:89,1029:89:3532:1029:40837:-3353.63,-19.0283,0 1/1:764:54,710:54:2140:710:28348:-2355.99,-37.2128,0 0/1:1010:152,858:152:6116:858:34070:-2759.18,0,-246.144 0/1:1047:472,574:472:18957:574:22871:-1741.13,0,-1389.22 0/1:1046:553,492:553:22131:492:19656:-1452.39,0,-1674.84 dDocent_Contig_449 10 . C T 39415.4 . AB=0.403543;ABP=290.38;AC=6;AF=0.5;AN=12;AO=1435;CIGAR=1X;DP=3556;DPB=3556;DPRA=0;EPP=3119.07;EPPR=4608.7;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995757;PAO=0;PQA=0;PQR=0;PRO=0;QA=55762;QR=84763;RO=2121;RPL=0;RPP=3119.07;RPPR=4608.7;RPR=1435;RUN=1;SAF=1435;SAP=3119.07;SAR=0;SRF=2121;SRP=4608.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:471:278,193:278:11142:193:7526:-535.273,0,-860.227 0/1:790:427,363:427:17088:363:14072:-1027.82,0,-1298.73 0/1:435:278,157:278:11101:157:6105:-418.36,0,-867.371 0/1:664:315,349:315:12595:349:13568:-1020.42,0,-932.739 0/1:484:300,184:300:11991:184:7157:-498.185,0,-932.642 0/1:712:523,189:523:20846:189:7334:-445.471,0,-1660.03 dDocent_Contig_450 37 . C T 66.2405 . AB=0.131579;ABP=47.8112;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=1X;DP=120;DPB=120;DPRA=0.676471;EPP=18.2106;EPPR=248.387;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=282;QR=4517;RO=113;RPL=0;RPP=18.2106;RPPR=248.387;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=113;SRP=248.387;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:14,2:14:553:2:79:-2.68076,0,-45.2978 0/0:9:9,0:9:360:0:0:0,-2.70927,-32.7636 0/0:42:42,0:42:1674:0:0:0,-12.6433,-150.885 0/0:15:14,1:14:566:1:41:0,-0.420883,-47.1874 0/1:22:19,3:19:756:3:122:-4.74983,0,-61.7408 0/0:16:15,1:15:608:1:40:0,-0.820801,-51.0626 dDocent_Contig_451 33 . C A 2032.24 . AB=0.311024;ABP=81.7988;AC=6;AF=0.5;AN=12;AO=79;CIGAR=1X;DP=254;DPB=254;DPRA=0;EPP=174.557;EPPR=383.018;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.544304;PAIREDR=0.777143;PAO=0;PQA=0;PQR=0;PRO=0;QA=3129;QR=6903;RO=175;RPL=0;RPP=174.557;RPPR=383.018;RPR=79;RUN=1;SAF=79;SAP=174.557;SAR=0;SRF=175;SRP=383.018;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:30,8:30:1179:8:320:-17.7262,0,-94.9531 0/1:39:27,12:27:1074:12:474:-31.2695,0,-85.2079 0/1:38:33,5:33:1304:5:204:-7.30489,0,-106.187 0/1:58:46,12:46:1801:12:470:-25.184,0,-144.843 0/1:41:26,15:26:1016:15:605:-42.446,0,-79.388 0/1:40:13,27:13:529:27:1056:-83.2901,0,-35.9157 dDocent_Contig_452 70 . C A 8775.54 . AB=0.177756;ABP=2808.98;AC=4;AF=0.333333;AN=12;AO=666;CIGAR=1X;DP=5554;DPB=5554;DPRA=0;EPP=1449.21;EPPR=10615;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.9895;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=1;PAIREDR=0.999795;PAO=0;PQA=0;PQR=0;PRO=0;QA=24337;QR=180281;RO=4887;RPL=666;RPP=1449.21;RPPR=10615;RPR=0;RUN=1;SAF=666;SAP=1449.21;SAR=0;SRF=4887;SRP=10615;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:691:499,192:499:17846:192:6903:-413.281,0,-1397.64 0/1:829:667,161:667:23730:161:5782:-270.841,0,-1885.33 0/1:676:574,102:574:21351:102:3866:-144.545,0,-1717.06 0/1:915:817,98:817:30426:98:3629:-51.2931,0,-2461.27 0/0:1139:1106,33:1106:41219:33:1223:0,-232.514,-3597.02 0/0:1304:1224,80:1224:45709:80:2934:0,-128.318,-3846.93 dDocent_Contig_453 1 . N G 110.102 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.91202;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=118;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:118:-11.0016,-0.90309,0 ./.:.:.:.:.:.:.:. dDocent_Contig_454 17 . T A 18041.6 . AB=0.749671;ABP=413.962;AC=6;AF=0.5;AN=12;AO=569;CIGAR=1X;DP=759;DPB=759;DPRA=0;EPP=1238.58;EPPR=415.59;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998243;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=22629;QR=7622;RO=190;RPL=0;RPP=1238.58;RPPR=415.59;RPR=569;RUN=1;SAF=569;SAP=1238.58;SAR=0;SRF=190;SRP=415.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:92:31,61:31:1251:61:2441:-192.146,0,-85.1646 0/1:133:43,90:43:1727:90:3568:-281.102,0,-115.611 0/1:108:26,82:26:1051:82:3267:-261.576,0,-62.3674 0/1:132:44,88:44:1741:88:3444:-270.266,0,-117.166 0/1:134:26,108:26:1043:108:4325:-348.856,0,-53.8184 0/1:160:20,140:20:809:140:5584:-454.21,0,-24.9602 dDocent_Contig_455 46 . T C 694.889 . AB=0.168103;ABP=224.987;AC=2;AF=0.166667;AN=12;AO=52;CIGAR=1X;DP=631;DPB=631;DPRA=1.43896;EPP=115.927;EPPR=1251.62;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998273;PAO=0;PQA=0;PQR=0;PRO=0;QA=2054;QR=23057;RO=579;RPL=0;RPP=115.927;RPPR=1251.62;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=579;SRP=1260.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:77:77,0:77:3045:0:0:0,-23.1793,-274.132 0/0:126:123,3:123:4882:3:102:0,-28.4148,-429.76 0/0:102:97,5:97:3885:5:204:0,-11.961,-330.897 0/0:94:89,5:89:3549:5:198:0,-10.0994,-301.235 0/1:116:100,16:100:4028:16:633:-22.3866,0,-327.571 0/1:116:93,23:93:3668:23:917:-47.9159,0,-295.221 dDocent_Contig_456 10 . C T 12746.9 . AB=0.269058;ABP=932.761;AC=6;AF=0.5;AN=12;AO=540;CIGAR=1X;DP=2007;DPB=2007;DPRA=0;EPP=1166.94;EPPR=3169.02;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0.0759259;PAIREDR=0.0875513;PAO=0;PQA=0;PQR=0;PRO=0;QA=20911;QR=57867;RO=1462;RPL=0;RPP=1175.61;RPPR=3177.7;RPR=540;RUN=1;SAF=539;SAP=1166.94;SAR=1;SRF=1461;SRP=3169.02;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:272:209,63:209:8310:63:2452:-138.985,0,-665.568 0/1:423:303,119:303:11952:119:4619:-288.278,0,-947.454 0/1:256:187,69:187:7342:69:2649:-161.52,0,-583.376 0/1:483:357,125:357:14148:125:4865:-292.4,0,-1126.87 0/1:182:139,42:139:5547:42:1602:-89.8309,0,-444.463 0/1:391:267,122:267:10568:122:4724:-307.671,0,-832.975 dDocent_Contig_457 107 . N A 87.8021 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.91202;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=94;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:94:-8.77161,-0.90309,0 dDocent_Contig_458 66 . C T 2829.42 . AB=0.125242;ABP=3782.19;AC=4;AF=0.333333;AN=12;AO=525;CIGAR=1X;DP=4571;DPB=4571;DPRA=0;EPP=1134.36;EPPR=8706.31;GTI=0;LEN=1;MEANALT=1.66667;MQM=59.141;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.287619;PAIREDR=0.139911;PAO=0;PQA=0;PQR=0;PRO=0;QA=18262;QR=141629;RO=4024;RPL=432;RPP=478.339;RPPR=5667.83;RPR=93;RUN=1;SAF=431;SAP=472.747;SAR=94;SRF=3628;SRP=5639.89;SRR=396;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:663:578,73:578:20043:73:2520:-30.5809,0,-1607.14 0/1:1084:923,158:923:31816:158:5456:-163.19,0,-2536.99 0/0:617:555,58:555:19908:58:2026:0,-2.60514,-1608.85 0/0:856:777,79:777:27563:79:2716:0,-13.0911,-2235.2 0/1:574:504,70:504:17951:70:2492:-50.297,0,-1442.35 0/1:777:687,87:687:24348:87:3052:-41.2799,0,-1957.32 dDocent_Contig_459 16 . C T 1354.05 . AB=0.206349;ABP=238.943;AC=4;AF=0.333333;AN=12;AO=71;CIGAR=1X;DP=458;DPB=458;DPRA=0;EPP=157.185;EPPR=843.37;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.929577;PAIREDR=0.912145;PAO=0;PQA=0;PQR=0;PRO=0;QA=2814;QR=15443;RO=387;RPL=0;RPP=157.185;RPPR=843.37;RPR=71;RUN=1;SAF=71;SAP=157.185;SAR=0;SRF=387;SRP=843.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:94:80,14:80:3178:14:556:-22.084,0,-257.793 0/1:69:63,6:63:2477:6:235:-0.746898,0,-202.293 0/0:59:58,1:58:2328:1:40:0,-13.7651,-205.678 0/0:84:79,5:79:3161:5:205:0,-6.45151,-265.717 0/1:61:41,20:41:1648:20:774:-51.6088,0,-130.186 0/1:91:66,25:66:2651:25:1004:-63.2617,0,-211.312 dDocent_Contig_460 7 . T C 652.062 . AB=0.153846;ABP=16.5402;AC=0;AF=0;AN=10;AO=2;CIGAR=2X3M1X3M1X3M2X;DP=27;DPB=145.933;DPRA=8.66667;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=4;MQM=40;MQMR=0;NS=5;NUMALT=7;ODDS=0;PAIRED=0;PAIREDR=0;PAO=78;PQA=2620;PQR=12597.4;PRO=378.286;QA=73;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:3:0,0,0,1,0,0,2,0:0:0:0,0,1,0,0,2,0:0,0,26,0,0,70,0:-7.63981,-7.63981,-7.63981,-7.63981,-7.63981,-7.63981,-5.69165,-5.69165,-5.69165,-5.39062,-7.63981,-7.63981,-7.63981,-5.69165,-7.63981,-7.63981,-7.63981,-7.63981,-5.69165,-7.63981,-7.63981,-1.94798,-1.94798,-1.94798,0,-1.94798,-1.94798,-1.34592,-7.63981,-7.63981,-7.63981,-5.69165,-7.63981,-7.63981,-1.94798,-7.63981 0|0:8:0,0,0,0,2,0,6,0:0:0:0,0,0,2,0,6,0:0,0,0,52,0,205,0:-20.7039,-20.7039,-20.7039,-20.7039,-20.7039,-20.7039,-20.7039,-20.7039,-20.7039,-20.7039,-16.6298,-16.6298,-16.6298,-16.6298,-16.0277,-20.7039,-20.7039,-20.7039,-20.7039,-16.6298,-20.7039,-4.07374,-4.07374,-4.07374,-4.07374,0,-4.07374,-2.26756,-20.7039,-20.7039,-20.7039,-20.7039,-16.6298,-20.7039,-4.07374,-20.7039 .:.:.:.:.:.:.:. 0|0:13:0,0,2,0,3,0,7,1:0:0:0,2,0,3,0,7,1:0,73,0,100,0,250,25:-28.3978,-28.3978,-28.3978,-22.8077,-22.8077,-22.2056,-28.3978,-28.3978,-22.8077,-28.3978,-20.3067,-20.3067,-14.7167,-20.3067,-19.4036,-28.3978,-28.3978,-22.8077,-28.3978,-20.3067,-28.3978,-8.09065,-8.09065,-2.50086,-8.09065,0,-8.09065,-5.98344,-26.4508,-26.4508,-20.8608,-26.4508,-18.3598,-26.4508,-6.1439,-26.1498 0|0:1:0,1,0,0,0,0,0,0:0:0:1,0,0,0,0,0,0:34,0,0,0,0,0,0:-3.0576,-0.30103,0,-3.0576,-0.30103,-3.0576,-3.0576,-0.30103,-3.0576,-3.0576,-3.0576,-0.30103,-3.0576,-3.0576,-3.0576,-3.0576,-0.30103,-3.0576,-3.0576,-3.0576,-3.0576,-3.0576,-0.30103,-3.0576,-3.0576,-3.0576,-3.0576,-3.0576,-3.0576,-0.30103,-3.0576,-3.0576,-3.0576,-3.0576,-3.0576,-3.0576 0|0:2:0,0,0,0,0,2,0,0:0:0:0,0,0,0,2,0,0:0,0,0,0,78,0,0:-7.00934,-7.00934,-7.00934,-7.00934,-7.00934,-7.00934,-7.00934,-7.00934,-7.00934,-7.00934,-7.00934,-7.00934,-7.00934,-7.00934,-7.00934,-0.60206,-0.60206,-0.60206,-0.60206,-0.60206,0,-7.00934,-7.00934,-7.00934,-7.00934,-7.00934,-0.60206,-7.00934,-7.00934,-7.00934,-7.00934,-7.00934,-7.00934,-0.60206,-7.00934,-7.00934 dDocent_Contig_461 39 . T C 21882.1 . AB=0.371006;ABP=306.086;AC=6;AF=0.5;AN=12;AO=778;CIGAR=1X;DP=2097;DPB=2097;DPRA=0;EPP=1692.42;EPPR=2867.18;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.2782;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.984837;PAO=0;PQA=0;PQR=0;PRO=0;QA=31383;QR=52874;RO=1319;RPL=0;RPP=1692.42;RPPR=2867.18;RPR=778;RUN=1;SAF=778;SAP=1692.42;SAR=0;SRF=1319;SRP=2867.18;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:183:142,41:142:5673:41:1666:-95.0695,0,-455.283 0/1:307:277,30:277:11166:30:1216:-17.2948,0,-898.67 0/1:296:259,37:259:10352:37:1503:-46.4026,0,-840.172 0/1:279:230,49:230:9249:49:1995:-95.7429,0,-711.59 0/1:476:127,349:127:5079:349:14045:-1119.65,0,-313.679 0/1:556:284,272:284:11355:272:10958:-818.053,0,-853.775 dDocent_Contig_462 107 . N A 620.788 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=20;CIGAR=1X;DP=20;DPB=20;DPRA=0;EPP=46.4397;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=672;QR=0;RO=0;RPL=0;RPP=46.4397;RPPR=0;RPR=20;RUN=1;SAF=0;SAP=46.4397;SAR=20;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:9:0,9:0:0:9:288:-26.2293,-2.70927,0 1/1:4:0,4:0:0:4:142:-13.1293,-1.20412,0 ./.:.:.:.:.:.:.:. 1/1:7:0,7:0:0:7:242:-22.1169,-2.10721,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_463 137 . G A 104.163 . AB=0.192308;ABP=24.391;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=173;DPB=173;DPRA=0.884354;EPP=13.8677;EPPR=367.818;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.934524;PAO=0;PQA=0;PQR=0;PRO=0;QA=202;QR=6735;RO=168;RPL=0;RPP=13.8677;RPPR=367.818;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=367.818;SRR=168;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:37,0:37:1496:0:0:0,-11.1381,-134.878 0/0:21:21,0:21:854:0:0:0,-6.32163,-77.1693 0/0:25:25,0:25:1000:0:0:0,-7.52575,-90.2939 0/0:50:50,0:50:2016:0:0:0,-15.0515,-181.618 0/0:14:14,0:14:562:0:0:0,-4.21442,-50.9198 0/1:26:21,5:21:807:5:202:-10.7351,0,-65.1105 dDocent_Contig_464 141 . A T 250.288 . AB=0.101523;ABP=546.407;AC=2;AF=0.166667;AN=12;AO=72;CIGAR=1X;DP=1337;DPB=1337;DPRA=1.021;EPP=159.356;EPPR=2749.92;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2868;QR=49163;RO=1265;RPL=0;RPP=159.356;RPPR=2749.92;RPR=72;RUN=1;SAF=0;SAP=159.356;SAR=72;SRF=0;SRP=2749.92;SRR=1265;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:178:161,17:161:6279:17:676:-7.58428,0,-511.299 0/0:217:205,12:205:7982:12:480:0,-21.7729,-674.443 0/0:296:277,19:277:10795:19:749:0,-21.3723,-903.119 0/1:216:193,23:193:7451:23:922:-18.2581,0,-605.238 0/0:219:219,0:219:8461:0:0:0,-65.9256,-761.063 0/0:211:210,1:210:8195:1:41:0,-59.4228,-733.042 dDocent_Contig_465 26 . G A 194.798 . AB=0.137255;ABP=119.589;AC=1;AF=0.0833333;AN=12;AO=27;CIGAR=1X;DP=743;DPB=743;DPRA=1.12894;EPP=61.6401;EPPR=1557.78;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99581;PAO=0;PQA=0;PQR=0;PRO=0;QA=1065;QR=28128;RO=716;RPL=0;RPP=61.6401;RPPR=1557.78;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=716;SRP=1557.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:102:88,14:88:3457:14:554:-19.4975,0,-280.503 0/0:157:153,4:153:6034:4:158:0,-32.6611,-528.299 0/0:60:60,0:60:2352:0:0:0,-18.0618,-211.856 0/0:135:126,9:126:4944:9:353:0,-8.50923,-412.779 0/0:137:137,0:137:5391:0:0:0,-41.2411,-485.09 0/0:152:152,0:152:5950:0:0:0,-45.7566,-535.357 dDocent_Contig_466 12 . T A 11197 . AB=0.434109;ABP=37.0637;AC=6;AF=0.5;AN=12;AO=392;CIGAR=1X3M;DP=903;DPB=903;DPRA=0;EPP=854.227;EPPR=1047.49;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.931122;PAIREDR=0.960499;PAO=0;PQA=0;PQR=0;PRO=0;QA=15413;QR=18992;RO=481;RPL=0;RPP=854.227;RPPR=1047.49;RPR=392;RUN=1;SAF=392;SAP=854.227;SAR=0;SRF=481;SRP=1047.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:107:79,0,27:79:3110:0,27:0,1024:-60.127,-83.9084,-339.743,0,-255.809,-247.681 0|1:176:127,0,48:127:5027:0,48:0,1865:-114.976,-153.206,-566.922,0,-413.697,-399.247 0|1:103:90,0,13:90:3558:0,13:0,521:-16.2306,-43.3233,-336.099,0,-293.175,-289.262 0|1:149:93,0,56:93:3676:0,56:0,2190:-152.43,-180.426,-482.921,0,-302.888,-286.03 0|1:128:22,2,103:22:888:2,103:80,4056:-327.096,-327.128,-399.73,0,-66.7022,-42.2871 0|1:240:70,24,145:70:2733:24,145:929,5757:-452.838,-397.604,-615.028,0,-148.346,-181.004 dDocent_Contig_467 61 . T A 26608.1 . AB=0.362774;ABP=451.177;AC=6;AF=0.5;AN=12;AO=994;CIGAR=1X4M;DP=2740;DPB=2740;DPRA=0;EPP=2161.45;EPPR=2969.24;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.998536;PAO=0;PQA=0;PQR=0;PRO=0;QA=37533;QR=52405;RO=1366;RPL=994;RPP=2161.45;RPPR=2969.24;RPR=0;RUN=1;SAF=994;SAP=2161.45;SAR=0;SRF=1366;SRP=2969.24;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:276:153,18,105:153:5809:18,105:646,3908:-273.786,-267.169,-738.076,0,-423.666,-444.732 0|1:409:232,23,151:232:8882:23,151:872,5678:-395.342,-393.687,-1115.64,0,-657.391,-683.429 0|1:436:228,28,179:228:8836:28,179:1091,6708:-480.706,-459.672,-1177.13,0,-636.221,-672.003 0|1:505:346,35,121:346:13293:35,121:1339,4627:-275.504,-269.791,-1350.41,0,-981.285,-1054.73 0|1:549:191,132,225:191:7326:132,225:5101,8512:-640.217,-278.761,-840.291,0,-182.312,-533.531 0|1:565:216,135,213:216:8259:135,213:5172,8100:-599.253,-239.845,-876.848,0,-253.211,-613.521 dDocent_Contig_468 41 . C A 77.9929 . AB=0.11236;ABP=119.172;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=406;DPB=406;DPRA=1.07364;EPP=46.4397;EPPR=841.199;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.976684;PAO=0;PQA=0;PQR=0;PRO=0;QA=759;QR=15007;RO=386;RPL=0;RPP=46.4397;RPPR=841.199;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=386;SRP=841.199;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:45,3:45:1740:3:111:0,-4.09683,-146.472 0/0:78:73,5:73:2883:5:184:0,-6.56806,-242.666 0/0:42:42,0:42:1662:0:0:0,-12.6433,-149.809 0/1:89:79,10:79:3043:10:384:-8.11805,0,-247.187 0/0:62:60,2:60:2333:2:80:0,-11.0721,-202.556 0/0:87:87,0:87:3346:0:0:0,-26.1896,-301.226 dDocent_Contig_469 98 . N T 164.028 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=168;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:38:-3.60948,-0.60206,0 1/1:3:0,3:0:0:3:105:-9.79609,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:25:-2.49986,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_470 61 . G A 1561.55 . AB=0.158556;ABP=648.06;AC=4;AF=0.333333;AN=12;AO=101;CIGAR=1X;DP=1136;DPB=1136;DPRA=0.638277;EPP=222.329;EPPR=2250.48;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.980198;PAIREDR=0.98744;PAO=0;PQA=0;PQR=0;PRO=0;QA=3879;QR=39766;RO=1035;RPL=101;RPP=222.329;RPPR=2250.48;RPR=0;RUN=1;SAF=101;SAP=222.329;SAR=0;SRF=1035;SRP=2250.48;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:135:106,29:106:3938:29:1055:-54.598,0,-313.876 0/1:143:129,14:129:4823:14:538:-5.71785,0,-391.067 0/1:67:58,9:58:2143:9:356:-12.2338,0,-172.88 0/1:292:243,49:243:9431:49:1930:-86.0105,0,-760.408 0/0:194:194,0:194:7530:0:0:0,-58.3998,-677.411 0/0:305:305,0:305:11901:0:0:0,-91.8141,-1070.37 dDocent_Contig_471 98 . N A 103.034 . AB=0;ABP=0;AC=4;AF=0.666667;AN=6;AO=3;CIGAR=1X;DP=4;DPB=4;DPRA=1.5;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=100;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 0/0:1:0,0:0:0:0:0:0,0,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:2:0,2:0:0:2:65:-6.17329,-0.60206,0 dDocent_Contig_472 10 . C T 517.074 . AB=0.135922;ABP=358.773;AC=1;AF=0.0833333;AN=12;AO=52;CIGAR=1X;DP=1421;DPB=1421;DPRA=1.025;EPP=115.927;EPPR=2971.41;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2000;QR=54744;RO=1367;RPL=0;RPP=115.927;RPPR=2971.41;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=1367;SRP=2971.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:195:194,1:194:7772:1:41:0,-54.6063,-694.967 0/0:270:268,1:268:10695:1:40:0,-77.3859,-957.819 0/0:112:111,1:111:4437:1:38:0,-29.9181,-395.449 0/0:232:232,0:232:9291:0:0:0,-69.839,-835.599 0/0:303:296,7:296:11870:7:271:0,-66.4576,-1042.67 0/1:309:266,42:266:10679:42:1610:-52.0262,0,-867.248 dDocent_Contig_473 69 . T G 7387.68 . AB=0.179974;ABP=2064.16;AC=5;AF=0.416667;AN=12;AO=417;CIGAR=1X;DP=2935;DPB=2935;DPRA=0.749838;EPP=908.514;EPPR=5444.72;GTI=0;LEN=1;MEANALT=2.2;MQM=59.9952;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=1;PAIREDR=0.998404;PAO=0;PQA=0;PQR=0;PRO=0;QA=15974;QR=90254;RO=2506;RPL=417;RPP=908.514;RPPR=5444.72;RPR=0;RUN=1;SAF=417;SAP=908.514;SAR=0;SRF=2506;SRP=5444.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:313:265,47:265:9443:47:1817:-69.4434,0,-755.357 0/1:513:383,130:383:13726:130:4877:-284.541,0,-1080.45 0/1:374:269,104:269:9738:104:4048:-251.667,0,-763.544 0/1:517:436,79:436:15698:79:3028:-117.208,0,-1256.81 0/0:618:615,0:615:22215:0:0:0,-185.133,-1998.32 0/1:600:538,57:538:19434:57:2204:-19.1097,0,-1568.86 dDocent_Contig_474 23 . T C 49.5879 . AB=0.25;ABP=7.35324;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=1X;DP=70;DPB=70;DPRA=0.645161;EPP=7.35324;EPPR=150.67;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=2574;RO=68;RPL=0;RPP=7.35324;RPPR=150.67;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=68;SRP=150.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:341:0:0:0,-2.70927,-31.0448 0/0:17:17,0:17:650:0:0:0,-5.11751,-58.8336 0/1:8:6,2:6:230:2:81:-5.27749,0,-18.6585 0/0:9:9,0:9:328:0:0:0,-2.70927,-29.8592 0/0:16:16,0:16:608:0:0:0,-4.81648,-55.0537 0/0:11:11,0:11:417:0:0:0,-3.31133,-37.8797 dDocent_Contig_475 22 . G A 7845.11 . AB=0.309598;ABP=308.139;AC=4;AF=0.333333;AN=12;AO=314;CIGAR=1X;DP=1330;DPB=1330;DPRA=0;EPP=684.853;EPPR=1883.48;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.974522;PAIREDR=0.889764;PAO=0;PQA=0;PQR=0;PRO=0;QA=12543;QR=39872;RO=1016;RPL=0;RPP=684.853;RPPR=2209.23;RPR=314;RUN=1;SAF=314;SAP=684.853;SAR=0;SRF=977;SRP=1883.48;SRR=39;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:166:150,16:150:5905:16:615:-5.69736,0,-481.304 0/1:266:240,26:240:9415:26:1048:-14.5376,0,-766.753 0/0:135:129,6:129:5016:6:236:0,-19.0277,-429.738 0/0:226:218,8:218:8545:8:326:0,-38.3229,-738.893 0/1:261:115,146:115:4583:146:5806:-443.77,0,-333.836 0/1:276:164,112:164:6408:112:4512:-322.912,0,-493.41 dDocent_Contig_476 28 . T C 4191.68 . AB=0.297872;ABP=203.155;AC=5;AF=0.416667;AN=12;AO=169;CIGAR=1X;DP=692;DPB=692;DPRA=0;EPP=369.989;EPPR=1138.69;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.7973;NS=6;NUMALT=1;ODDS=0;PAIRED=0.976331;PAIREDR=0.98088;PAO=0;PQA=0;PQR=0;PRO=0;QA=6606;QR=19088;RO=523;RPL=0;RPP=369.989;RPPR=1138.69;RPR=169;RUN=1;SAF=169;SAP=369.989;SAR=0;SRF=523;SRP=1138.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:96:84,12:84:3088:12:460:-12.8443,0,-249.196 0/0:128:127,1:127:4610:1:41:0,-34.4373,-410.894 0/1:95:77,18:77:2788:18:673:-32.2793,0,-222.5 0/1:166:149,17:149:5520:17:677:-11.285,0,-446.831 0/1:76:35,41:35:1247:41:1614:-122.624,0,-86.3987 0/1:131:51,80:51:1835:80:3141:-243.337,0,-125.964 dDocent_Contig_477 7 . A T 13071.8 . AB=0.164692;ABP=4041.12;AC=6;AF=0.5;AN=12;AO=681;CIGAR=1X7M;DP=4135;DPB=4180.62;DPRA=0;EPP=1481.78;EPPR=6230.79;GTI=0;LEN=1;MEANALT=7.33333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=25975;QR=111262;RO=2868;RPL=0;RPP=1481.78;RPPR=6230.79;RPR=681;RUN=1;SAF=681;SAP=1481.78;SAR=0;SRF=2868;SRP=6230.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:406:264,11,71,57:264:10233:11,71,57:410,2702,2170:-142.15,-188.058,-1025.43,0,-807.125,-819.315,-43.6315,-850.756,-662.7,-867.161 0|1:520:294,34,69,114:294:11434:34,69,114:1288,2635,4340:-267.471,-250.374,-1179.77,-139.778,-973.806,-1058.63,0,-834.028,-723.433,-905.31 0|1:443:325,21,35,50:325:12564:21,35,50:805,1347,1919:-59.6828,-91.4459,-1117.05,-46.9217,-1012.77,-1068.31,0,-965.85,-921.326,-1016.87 0|1:638:463,57,13,82:463:17942:57,13,82:2184,491,3144:-118.667,-78.7961,-1535.62,-217.802,-1512.53,-1687.87,0,-1294.73,-1433.74,-1449.29 0|1:1078:782,17,104,168:782:30382:17,104,168:644,3986,6431:-292.351,-474.958,-2966.34,-200.609,-2644.31,-2665.8,0,-2443.71,-2169.36,-2445.93 0|1:1050:740,23,68,210:740:28707:23,68,210:876,2586,7971:-430.857,-581.762,-2933.39,-441.528,-2728.22,-2779.61,0,-2286.7,-2146.47,-2295.34 dDocent_Contig_478 1 . N G 77.0277 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.21888;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_479 89 . G A 71.1058 . AB=0.102215;ABP=809.781;AC=1;AF=0.0833333;AN=12;AO=108;CIGAR=1X;DP=2460;DPB=2460;DPRA=0;EPP=237.529;EPPR=5110.31;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998724;PAO=0;PQA=0;PQR=0;PRO=0;QA=3736;QR=82412;RO=2352;RPL=108;RPP=237.529;RPPR=5110.31;RPR=0;RUN=1;SAF=108;SAP=237.529;SAR=0;SRF=2352;SRP=5110.31;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:438:425,13:425:14887:13:456:0,-90.4775,-1298.24 0/1:587:527,60:527:18409:60:2043:-7.42934,0,-1479.76 0/0:348:337,11:337:11850:11:398:0,-68.5954,-1030.22 0/0:553:531,22:531:18583:22:768:0,-97.0316,-1602.68 0/0:319:318,1:318:11182:1:36:0,-92.4303,-1002.7 0/0:215:214,1:214:7501:1:35:0,-61.2228,-671.652 dDocent_Contig_480 19 . G A 291.67 . AB=0.166667;ABP=95.6598;AC=1;AF=0.0833333;AN=12;AO=26;CIGAR=1X;DP=542;DPB=542;DPRA=1.22131;EPP=59.4686;EPPR=1123.49;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998062;PAO=0;PQA=0;PQR=0;PRO=0;QA=1044;QR=20553;RO=516;RPL=0;RPP=59.4686;RPPR=1123.49;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=516;SRP=1123.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:75:71,4:71:2823:4:154:0,-8.34507,-239.945 0/1:96:80,16:80:3204:16:645:-29.4857,0,-259.529 0/0:29:29,0:29:1136:0:0:0,-8.72987,-102.515 0/0:127:121,6:121:4843:6:245:0,-15.8013,-413.34 0/0:98:98,0:98:3894:0:0:0,-29.5009,-350.454 0/0:117:117,0:117:4653:0:0:0,-35.2205,-418.688 dDocent_Contig_481 21 . A G 81.675 . AB=0.0927835;ABP=422.149;AC=1;AF=0.0833333;AN=12;AO=86;CIGAR=1X;DP=3143;DPB=3143;DPRA=0.789171;EPP=189.757;EPPR=6639.03;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.913613;PAO=0;PQA=0;PQR=0;PRO=0;QA=3357;QR=122030;RO=3056;RPL=0;RPP=189.757;RPPR=6639.03;RPR=86;RUN=1;SAF=86;SAP=189.757;SAR=0;SRF=3056;SRP=6639.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:291:264,27:264:10546:27:1061:-8.18523,0,-860.837 0/0:490:462,28:462:18464:28:1093:0,-48.8424,-1561.56 0/0:634:610,24:610:24333:24:939:0,-106.037,-2103 0/0:509:502,7:502:19970:7:264:0,-129.107,-1771.54 0/0:569:569,0:569:22780:0:0:0,-171.286,-2048.22 0/0:650:649,0:649:25937:0:0:0,-195.368,-2331.79 dDocent_Contig_482 24 . T G 1837.07 . AB=0.185115;ABP=454.295;AC=3;AF=0.25;AN=12;AO=111;CIGAR=1X;DP=1194;DPB=1194;DPRA=0.766802;EPP=244.044;EPPR=2348.2;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999074;PAO=0;PQA=0;PQR=0;PRO=0;QA=4355;QR=42544;RO=1080;RPL=0;RPP=244.044;RPPR=2348.2;RPR=111;RUN=1;SAF=111;SAP=244.044;SAR=0;SRF=1080;SRP=2348.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:127:120,7:120:4696:7:276:0,-13.0243,-397.362 0/1:155:114,40:114:4543:40:1552:-93.1687,0,-362.05 0/1:109:92,17:92:3600:17:644:-25.4626,0,-291.227 0/1:260:220,40:220:8661:40:1608:-66.6855,0,-700.744 0/0:247:245,0:245:9644:0:0:0,-73.7523,-867.307 0/0:296:289,7:289:11400:7:275:0,-63.99,-1000.14 dDocent_Contig_483 7 . A T 23147.3 . AB=0.451613;ABP=28.2274;AC=7;AF=0.583333;AN=12;AO=560;CIGAR=1X2M1X;DP=1240;DPB=1240;DPRA=0;EPP=1219.03;EPPR=624.051;GTI=0;LEN=1;MEANALT=4.83333;MQM=59.7089;MQMR=60;NS=6;NUMALT=3;ODDS=2.22045e-16;PAIRED=1;PAIREDR=0.84965;PAO=0;PQA=0;PQR=0;PRO=0;QA=21432;QR=10933;RO=286;RPL=0;RPP=1219.03;RPPR=624.051;RPR=560;RUN=1;SAF=560;SAP=1219.03;SAR=0;SRF=286;SRP=624.051;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:138:37,7,86,5:37:1402:7,86,5:271,3279,194:-257.85,-246.726,-359.564,0,-92.6808,-89.0557,-253.048,-345.73,-99.0034,-366.488 0|1:225:56,21,109,36:56:2152:21,109,36:802,4173,1366:-325.603,-276.659,-447.005,0,-110.867,-143.857,-230.461,-341.327,-64.6696,-396.291 0|1:139:57,14,55,9:57:2180:14,55,9:541,2122,348:-157.106,-129.85,-304.519,0,-134.468,-162.326,-145.68,-280.148,-150.298,-321.854 1|1:162:39,26,44,52:39:1488:26,44,52:1001,1696,1986:-168.4,-97.9503,-212.199,-40.8701,-80.7554,-149.701,-17.1955,-57.0804,0,-123.617 0|1:269:37,0,2,229:37:1425:0,2,229:0,76,8785:-709.673,-720.812,-837.82,-714.579,-831.587,-830.985,0,-117.01,-110.777,-48.0741 0|1:307:60,6,9,229:60:2286:6,9,229:233,332,8753:-700.099,-699.014,-884.725,-691.011,-859.382,-875.819,0,-168.373,-160.371,-118.584 dDocent_Contig_484 13 . C T 215.452 . AB=0.133333;ABP=143.143;AC=3;AF=0.25;AN=12;AO=16;CIGAR=1X;DP=233;DPB=233;DPRA=1.06195;EPP=37.7539;EPPR=474.22;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.917051;PAO=0;PQA=0;PQR=0;PRO=0;QA=646;QR=8694;RO=217;RPL=0;RPP=37.7539;RPPR=474.22;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=217;SRP=474.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:38,0:38:1529:0:0:0,-11.4391,-137.85 0/1:50:43,7:43:1726:7:286:-11.0633,0,-140.503 0/0:41:41,0:41:1664:0:0:0,-12.3422,-149.98 0/0:34:34,0:34:1340:0:0:0,-10.235,-120.86 0/1:41:35,6:35:1398:6:240:-9.63231,0,-113.728 0/1:29:26,3:26:1037:3:120:-2.45744,0,-84.8902 dDocent_Contig_486 9 . G A 109.831 . AB=0.10625;ABP=218.475;AC=1;AF=0.0833333;AN=12;AO=63;CIGAR=1X;DP=1299;DPB=1299;DPRA=0;EPP=139.813;EPPR=2686.95;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9992;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2405;QR=47336;RO=1236;RPL=0;RPP=139.813;RPPR=2686.95;RPR=63;RUN=1;SAF=63;SAP=139.813;SAR=0;SRF=1236;SRP=2686.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:216:210,6:210:8062:6:233:0,-43.6824,-704.031 0/0:279:260,19:260:9946:19:726:0,-18.3172,-829.121 0/1:160:143,17:143:5474:17:657:-11.3019,0,-444.48 0/0:275:270,5:270:10338:5:195:0,-64.859,-912.133 0/0:136:132,4:132:5051:4:156:0,-26.5228,-440.182 0/0:233:221,12:221:8465:12:438:0,-30.3817,-721.853 dDocent_Contig_487 143 . C A 108.728 . AB=0.1;ABP=267.061;AC=1;AF=0.0833333;AN=12;AO=53;CIGAR=1X;DP=1265;DPB=1265;DPRA=0.812;EPP=118.098;EPPR=2632.66;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=59.9306;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998348;PAO=0;PQA=0;PQR=0;PRO=0;QA=2102;QR=47765;RO=1211;RPL=0;RPP=118.098;RPPR=2632.66;RPR=53;RUN=1;SAF=0;SAP=118.098;SAR=53;SRF=0;SRP=2632.66;SRR=1211;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:190:171,19:171:6719:19:753:-10.8905,0,-545.091 0/0:210:194,15:194:7575:15:577:0,-11.0643,-629.157 0/0:166:155,11:155:6136:11:450:0,-9.1152,-511.141 0/0:186:181,5:181:7113:5:203:0,-37.3385,-621.207 0/0:250:250,0:250:9916:0:0:0,-75.2575,-891.838 0/0:263:260,3:260:10306:3:119:0,-68.0759,-914.176 dDocent_Contig_488 15 . G T 1682.29 . AB=0.136054;ABP=1017.75;AC=2;AF=0.166667;AN=12;AO=121;CIGAR=1X;DP=2346;DPB=2346;DPRA=1.29326;EPP=265.758;EPPR=4830.19;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993252;PAO=0;PQA=0;PQR=0;PRO=0;QA=4867;QR=87765;RO=2223;RPL=0;RPP=265.758;RPPR=4830.19;RPR=121;RUN=1;SAF=121;SAP=265.758;SAR=0;SRF=2223;SRP=4830.19;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:321:321,0:321:12679:0:0:0,-96.6306,-1140.24 0/0:441:440,1:440:17449:1:41:0,-128.66,-1564.96 0/0:336:336,0:336:13231:0:0:0,-101.146,-1189.84 0/0:366:365,0:365:14386:0:0:0,-109.876,-1293.32 0/1:475:417,58:417:16363:58:2344:-68.1187,0,-1328.46 0/1:407:344,62:344:13657:62:2482:-100.924,0,-1105.55 dDocent_Contig_489 16 . T A 172.989 . AB=0.117647;ABP=218.88;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=964;DPB=964;DPRA=1.07053;EPP=46.4397;EPPR=2052.88;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=761;QR=37615;RO=944;RPL=0;RPP=46.4397;RPPR=2052.88;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=944;SRP=2052.88;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:88:88,0:88:3472:0:0:0,-26.4906,-312.526 0/0:265:265,0:265:10572:0:0:0,-79.7729,-950.773 0/0:101:101,0:101:4023:0:0:0,-30.404,-362.053 0/0:138:138,0:138:5496:0:0:0,-41.5421,-494.454 0/1:170:150,20:150:5968:20:761:-17.6177,0,-485.731 0/0:202:202,0:202:8084:0:0:0,-60.8081,-727.112 dDocent_Contig_490 208 . A G 10712.8 . AB=0.210541;ABP=2571.27;AC=4;AF=0.333333;AN=12;AO=782;CIGAR=1X;DP=4870;DPB=4870;DPRA=0;EPP=1701.1;EPPR=8869.13;GTI=0;LEN=1;MEANALT=1.83333;MQM=40;MQMR=40;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=25761;QR=158686;RO=4083;RPL=782;RPP=1701.1;RPPR=8869.13;RPR=0;RUN=1;SAF=0;SAP=1701.1;SAR=782;SRF=0;SRP=8869.13;SRR=4083;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:823:566,256:566:21950:256:8516:-497.162,0,-1583.25 0/1:816:683,132:683:26461:132:4329:-133.206,0,-1961.38 0/1:1035:861,174:861:33423:174:5635:-182.897,0,-2477.34 0/1:855:673,181:673:26089:181:5901:-260.419,0,-1921.05 0/0:656:623,31:623:24310:31:1098:0,-102.565,-1932.41 0/0:685:677,8:677:26453:8:282:0,-182.033,-2180.68 dDocent_Contig_491 1 . N G 180.167 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.29832;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=196;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:196:-18.0145,-1.50515,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_493 47 . T C 454.01 . AB=0.155556;ABP=188.502;AC=2;AF=0.166667;AN=12;AO=34;CIGAR=1X;DP=337;DPB=337;DPRA=3.5119;EPP=76.8404;EPPR=237.794;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.986799;PAO=0;PQA=0;PQR=0;PRO=0;QA=1339;QR=12128;RO=303;RPL=0;RPP=76.8404;RPPR=237.794;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=303;SRP=660.966;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:63:61,2:61:2425:2:69:0,-12.4153,-211.85 0/1:71:54,17:54:2181:17:667:-38.9792,0,-175.082 0/1:109:98,11:98:3926:11:441:-7.23306,0,-320.509 0/0:52:48,4:48:1911:4:162:0,-0.686604,-157.225 0/0:24:24,0:24:970:0:0:0,-7.22472,-87.5981 0/0:18:18,0:18:715:0:0:0,-5.41854,-64.6764 dDocent_Contig_494 28 . T C 79.0171 . AB=0.0984848;ABP=187.849;AC=1;AF=0.0833333;AN=12;AO=26;CIGAR=1X;DP=698;DPB=698;DPRA=1.35811;EPP=59.4686;EPPR=1462.24;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.576923;PAIREDR=0.553571;PAO=0;PQA=0;PQR=0;PRO=0;QA=1047;QR=26999;RO=672;RPL=0;RPP=59.4686;RPPR=1462.24;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=672;SRP=1462.24;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:89:89,0:89:3564:0:0:0,-26.7917,-320.779 0/0:131:129,2:129:5193:2:78:0,-32.0316,-459.808 0/0:84:84,0:84:3380:0:0:0,-25.2865,-304.238 0/0:123:123,0:123:4958:0:0:0,-37.0267,-446.087 0/0:139:128,11:128:5126:11:440:0,-1.88757,-421.237 0/1:132:119,13:119:4778:13:529:-8.22032,0,-390.167 dDocent_Contig_495 77 . A G 973.077 . AB=0.207627;ABP=178.237;AC=4;AF=0.333333;AN=12;AO=49;CIGAR=1X;DP=438;DPB=438;DPRA=0.584158;EPP=109.412;EPPR=847.713;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.408163;PAIREDR=0.652956;PAO=0;PQA=0;PQR=0;PRO=0;QA=1882;QR=15028;RO=389;RPL=32;RPP=12.9813;RPPR=18.6907;RPR=17;RUN=1;SAF=32;SAP=12.9813;SAR=17;SRF=221;SRP=18.6907;SRR=168;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:34,7:34:1317:7:276:-12.865,0,-106.462 0/1:53:41,12:41:1558:12:436:-23.615,0,-124.53 0/1:53:45,8:45:1779:8:308:-12.1276,0,-144.382 0/1:89:67,22:67:2619:22:862:-51.1054,0,-209.085 0/0:98:98,0:98:3705:0:0:0,-29.5009,-333.55 0/0:104:104,0:104:4050:0:0:0,-31.3071,-364.536 dDocent_Contig_496 107 . N T 484.235 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=16;CIGAR=1X;DP=16;DPB=16;DPRA=0;EPP=37.7539;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=513;QR=0;RO=0;RPL=0;RPP=37.7539;RPPR=0;RPR=16;RUN=1;SAF=0;SAP=37.7539;SAR=16;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:6:0,6:0:0:6:190:-17.412,-1.80618,0 1/1:4:0,4:0:0:4:137:-12.6682,-1.20412,0 1/1:3:0,3:0:0:3:96:-8.95781,-0.90309,0 1/1:2:0,2:0:0:2:65:-6.17345,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:25:-2.49986,-0.30103,0 dDocent_Contig_497 24 . G A 25976.5 . AB=0.240969;ABP=2648.91;AC=6;AF=0.5;AN=12;AO=1094;CIGAR=1X1M;DP=4540;DPB=4540;DPRA=0;EPP=2378.6;EPPR=7303.5;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.998513;PAO=0;PQA=0;PQR=0;PRO=0;QA=43856;QR=129919;RO=3362;RPL=0;RPP=2378.6;RPPR=7303.5;RPR=1094;RUN=1;SAF=1094;SAP=2378.6;SAR=0;SRF=3362;SRP=7303.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:595:396,0,199:396:15277:0,199:0,7990:-539.535,-658.743,-1913.22,0,-1254.87,-1194.97 0|1:829:571,36,222:571:22126:36,222:1454,8865:-558.202,-610.222,-2416.99,0,-1697.73,-1750.77 0|1:455:363,3,89:363:14040:3,89:121,3566:-184.497,-283.797,-1436.04,0,-1143.17,-1126.35 0|1:752:538,42,172:538:20728:42,172:1698,6882:-404.932,-426.891,-2116.12,0,-1561.87,-1650.09 0|1:958:821,0,136:821:31730:0,136:0,5455:-202.422,-449.567,-3055.52,0,-2606.08,-2565.14 0|1:951:673,0,276:673:26018:0,276:0,11098:-712.063,-914.656,-3051.53,0,-2136.98,-2053.89 dDocent_Contig_499 35 . C T 502.881 . AB=0.134897;ABP=397.83;AC=3;AF=0.25;AN=12;AO=46;CIGAR=1X;DP=736;DPB=736;DPRA=0.863291;EPP=102.898;EPPR=1501.33;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.992754;PAO=0;PQA=0;PQR=0;PRO=0;QA=1706;QR=27183;RO=690;RPL=0;RPP=102.898;RPPR=1501.33;RPR=46;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=690;SRP=1501.33;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:108:92,16:92:3627:16:588:-20.7435,0,-293.969 0/0:164:164,0:164:6500:0:0:0,-49.3689,-584.769 0/1:107:94,13:94:3700:13:487:-11.9594,0,-300.835 0/1:126:109,17:109:4281:17:631:-19.1947,0,-347.357 0/0:113:113,0:113:4433:0:0:0,-34.0164,-398.946 0/0:118:118,0:118:4642:0:0:0,-35.5215,-417.733 dDocent_Contig_500 162 . A G 4716.27 . AB=0.339147;ABP=118.974;AC=3;AF=0.25;AN=12;AO=183;CIGAR=1X;DP=1077;DPB=1077;DPRA=0.917105;EPP=400.39;EPPR=1926.97;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7293;QR=35734;RO=894;RPL=183;RPP=400.39;RPPR=1926.97;RPR=0;RUN=1;SAF=0;SAP=400.39;SAR=183;SRF=0;SRP=1944.31;SRR=894;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:141:113,28:113:4532:28:1118:-58.4547,0,-365.341 0/1:186:134,52:134:5363:52:2075:-130.94,0,-426.514 0/0:181:173,8:173:6901:8:314:0,-25.8639,-592.148 0/1:189:94,95:94:3769:95:3786:-283.842,0,-282.314 0/0:210:210,0:210:8414:0:0:0,-63.2163,-756.765 0/0:170:170,0:170:6755:0:0:0,-51.1751,-607.629 dDocent_Contig_501 80 . A T 163.533 . AB=0.148649;ABP=82.3571;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=253;DPB=253;DPRA=1.00794;EPP=33.4109;EPPR=521.992;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=537;QR=9262;RO=239;RPL=14;RPP=33.4109;RPPR=521.992;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=239;SRP=521.992;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:35,7:35:1389:7:276:-12.5664,0,-112.628 0/1:32:28,4:28:1038:4:154:-4.6005,0,-84.0953 0/0:76:76,0:76:2948:0:0:0,-22.8783,-265.452 0/0:53:50,3:50:1928:3:107:0,-5.97483,-163.759 0/0:22:22,0:22:851:0:0:0,-6.62266,-76.8985 0/0:28:28,0:28:1108:0:0:0,-8.42884,-100.012 dDocent_Contig_502 95 . T G 5415.18 . AB=0.346521;ABP=152.984;AC=5;AF=0.416667;AN=12;AO=262;CIGAR=1X;DP=842;DPB=842;DPRA=0;EPP=571.936;EPPR=1258.12;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.980916;PAIREDR=0.989619;PAO=0;PQA=0;PQR=0;PRO=0;QA=8759;QR=18851;RO=578;RPL=262;RPP=571.936;RPPR=1258.12;RPR=0;RUN=1;SAF=262;SAP=571.936;SAR=0;SRF=578;SRP=1258.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:129:87,42:87:2839:42:1409:-88.2718,0,-216.919 0/1:135:102,32:102:3321:32:1051:-54.2965,0,-258.533 0/0:109:100,8:100:3323:8:271:0,-8.1394,-274.58 0/1:183:144,39:144:4671:39:1280:-60.3992,0,-365.489 0/1:89:17,72:17:570:72:2416:-190.908,0,-24.825 0/1:197:128,69:128:4127:69:2332:-150.843,0,-312.33 dDocent_Contig_503 55 . G A 2994.29 . AB=0.172018;ABP=817.771;AC=3;AF=0.25;AN=12;AO=159;CIGAR=1X3M1X2M;DP=1467;DPB=1461.71;DPRA=0;EPP=348.274;EPPR=2511.06;GTI=0;LEN=1;MEANALT=4.25;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5983;QR=43288;RO=1155;RPL=159;RPP=348.274;RPPR=2511.06;RPR=0;RUN=1;SAF=159;SAP=348.274;SAR=0;SRF=1155;SRP=2511.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:210:168,30,0,9:168:6232:30,0,9:1125,0,343:-41.5693,0,-500.906,-92.1423,-509.937,-602.086,-64.0041,-481.799,-573.949,-571.239 0|1:400:315,60,0,20:315:11624:60,0,20:2228,0,717:-87.5132,0,-932.646,-182.338,-950.707,-1133.02,-125.498,-893.865,-1076.18,-1070.16 0|0:166:141,9,0,15:141:5357:9,0,15:341,0,515:0,-14.4771,-451.11,-42.4452,-453.82,-481.772,-2.0168,-413.369,-441.321,-436.806 0|1:262:189,60,0,0:189:7201:60,0,0:2289,0,0:-130.899,0,-572.654,-187.794,-590.716,-778.488,-187.794,-590.716,-778.488,-778.488 0|0:214:176,0,13,23:176:6659:0,13,23:0,471,879:-19.1652,-72.1464,-618.026,-33.7013,-579.579,-575.665,0,-545.901,-507.454,-538.978 0|0:215:166,0,24,23:166:6215:0,24,23:0,897,856:-23.4827,-73.4537,-582.417,0,-508.969,-501.744,-3.39212,-512.359,-438.911,-505.436 dDocent_Contig_504 32 . G C 48.8189 . AB=0.0677966;ABP=98.7391;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=6M1X3M1X1M;DP=258;DPB=260.5;DPRA=0.686275;EPP=16.0391;EPPR=521.992;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0.65272;PAO=0;PQA=0;PQR=0;PRO=0;QA=239;QR=9415;RO=239;RPL=0;RPP=16.0391;RPPR=521.992;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=239;SRP=521.992;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:27:23,3,0,1:23:899:3,0,1:118,0,38:-2.79239,0,-73.0166,-9.71608,-73.9197,-83.6262,-6.60287,-70.8036,-80.5101,-80.2091 0|0:59:57,0,0,0:57:2247:0,0,0:0,0,0:0,-17.1587,-202.184,-17.1587,-202.184,-202.184,-17.1587,-202.184,-202.184,-202.184 0|0:32:24,1,3,3:24:945:1,3,3:41,120,122:-2.85672,-6.69256,-84.1493,-0.182163,-74.5641,-77.0458,0,-74.3852,-67.8836,-76.8669 0|0:46:44,2,0,0:44:1738:2,0,0:80,0,0:0,-6.25559,-149.06,-13.2453,-149.662,-156.253,-13.2453,-149.662,-156.253,-156.253 0|0:24:24,0,0,0:24:932:0,0,0:0,0,0:0,-7.22472,-84.1857,-7.22472,-84.1857,-84.1857,-7.22472,-84.1857,-84.1857,-84.1857 0|0:70:67,0,0,3:67:2654:0,0,3:0,0,122:0,-20.169,-238.6,-20.169,-238.6,-238.6,-9.69961,-228.537,-228.537,-227.634 dDocent_Contig_505 98 . N T 283.478 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=10;CIGAR=1X;DP=11;DPB=11;DPRA=0;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=293;QR=0;RO=0;RPL=10;RPP=24.725;RPPR=0;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 1/1:3:0,3:0:0:3:75:-6.99791,-0.90309,0 1/1:2:0,2:0:0:2:56:-5.31924,-0.60206,0 1/1:4:0,3:0:0:3:96:-8.713,-0.90309,0 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_506 16 . T C 357.259 . AB=0.152318;ABP=161.557;AC=3;AF=0.25;AN=12;AO=24;CIGAR=1X;DP=343;DPB=343;DPRA=0.514793;EPP=55.1256;EPPR=695.71;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.962382;PAO=0;PQA=0;PQR=0;PRO=0;QA=935;QR=12768;RO=319;RPL=0;RPP=55.1256;RPPR=695.71;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=319;SRP=695.71;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:22,1:22:873:1:27:0,-4.22391,-76.1782 0/1:75:64,11:64:2547:11:444:-17.7375,0,-206.78 0/1:43:36,7:36:1449:7:284:-12.9891,0,-117.712 0/1:33:28,5:28:1113:5:180:-6.60885,0,-90.5217 0/0:84:84,0:84:3364:0:0:0,-25.2865,-302.806 0/0:85:85,0:85:3422:0:0:0,-25.5875,-308.018 dDocent_Contig_507 13 . T A 7747.63 . AB=0.20064;ABP=1461.73;AC=3;AF=0.25;AN=12;AO=490;CIGAR=1X;DP=3430;DPB=3430;DPRA=0;EPP=1067.03;EPPR=6384.97;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.9939;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997959;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=19393;QR=117175;RO=2939;RPL=0;RPP=1067.03;RPPR=6384.97;RPR=490;RUN=1;SAF=490;SAP=1067.03;SAR=0;SRF=2939;SRP=6384.97;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:421:371,50:371:14791:50:1969:-50.6798,0,-1203.29 0/0:577:544,33:544:21664:33:1291:0,-57.241,-1831.46 0/0:357:327,29:327:12999:29:1158:0,-2.85336,-1064.47 0/0:622:570,52:570:22756:52:2046:0,-2.90254,-1861.75 0/1:685:507,178:507:20238:178:7060:-428.87,0,-1613.52 0/1:768:620,148:620:24727:148:5869:-296.823,0,-1992.08 dDocent_Contig_508 13 . T C 7083.5 . AB=0.173832;ABP=497.379;AC=1;AF=0.0833333;AN=12;AO=95;CIGAR=3X3M;DP=788;DPB=788;DPRA=0;EPP=209.3;EPPR=789.083;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3766;QR=14249;RO=362;RPL=0;RPP=209.3;RPPR=789.083;RPR=95;RUN=1;SAF=95;SAP=209.3;SAR=0;SRF=362;SRP=789.083;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:39:34,1,1,2,1:34:1329:1,1,2,1:40,41,80,40:0,-6.94043,-115.887,-6.84896,-112.804,-115.798,-3.64618,-109.598,-109.509,-112.291,-6.94043,-112.893,-112.804,-109.598,-115.887 0|0:23:13,0,0,3,7:13:516:0,0,3,7:0,0,117,279:-19.0684,-22.9818,-65.4607,-22.9818,-65.4607,-65.4607,-13.3673,-55.8447,-55.8447,-54.9416,0,-42.484,-42.484,-32.8683,-40.3768 0|0:71:43,10,5,0,13:43:1683:10,5,0,13:397,202,0,519:-29.8,-10.0623,-145.421,-26.0898,-131.777,-162.955,-42.7442,-148.431,-164.46,-181.114,0,-105.685,-121.715,-138.369,-134.456 0|0:143:80,6,33,0,23:80:3168:6,33,0,23:217,1311,0,895:-83.8541,-90.2305,-349.167,0,-243.043,-250.817,-107.937,-350.974,-260.751,-368.681,-34.3953,-277.432,-187.209,-295.14,-288.216 0|1:240:107,41,10,59,21:107:4221:41,10,59,21:1574,401,2334,848:-159.871,-62.8902,-397.829,-159.042,-377.133,-503.315,0,-218.093,-314.246,-329.524,-122.172,-340.264,-436.418,-277.377,-463.135 0|0:272:85,140,7,31,9:85:3332:140,7,31,9:5413,285,1235,361:-418.958,0,-231.847,-421.034,-250.48,-692.924,-342.849,-172.296,-593.336,-607.515,-414.803,-244.249,-665.29,-587.105,-686.091 dDocent_Contig_509 28 . A T 525.467 . AB=0.264368;ABP=44.9671;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1X;DP=280;DPB=280;DPRA=0.901554;EPP=52.9542;EPPR=561.079;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.782609;PAIREDR=0.536965;PAO=0;PQA=0;PQR=0;PRO=0;QA=876;QR=10050;RO=257;RPL=0;RPP=52.9542;RPPR=561.079;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=257;SRP=561.079;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1075:0:0:0,-8.12781,-97.0424 0/0:69:69,0:69:2649:0:0:0,-20.7711,-238.546 0/0:40:40,0:40:1583:0:0:0,-12.0412,-142.714 0/0:57:57,0:57:2243:0:0:0,-17.1587,-202.055 0/1:41:37,4:37:1443:4:159:-2.3501,0,-117.785 0/1:46:27,19:27:1057:19:717:-51.0082,0,-81.5695 dDocent_Contig_511 13 . T A 35.0359 . AB=0.1;ABP=86.3948;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=246;DPB=246;DPRA=1.05;EPP=24.725;EPPR=515.478;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.974576;PAO=0;PQA=0;PQR=0;PRO=0;QA=400;QR=9464;RO=236;RPL=0;RPP=24.725;RPPR=515.478;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=236;SRP=515.478;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:37,0:37:1474:0:0:0,-11.1381,-132.901 0/1:60:54,6:54:2154:6:239:-3.82209,0,-175.966 0/0:31:31,0:31:1248:0:0:0,-9.33193,-112.587 0/0:32:30,2:30:1219:2:79:0,-2.13572,-102.482 0/0:34:32,2:32:1278:2:82:0,-2.45534,-107.504 0/0:52:52,0:52:2091:0:0:0,-15.6536,-188.369 dDocent_Contig_512 29 . T C 1026.52 . AB=0.41573;ABP=8.49998;AC=1;AF=0.0833333;AN=12;AO=42;CIGAR=1X;DP=381;DPB=381;DPRA=1.46364;EPP=85.7331;EPPR=677.426;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.952381;PAIREDR=0.934911;PAO=0;PQA=0;PQR=0;PRO=0;QA=1643;QR=12986;RO=338;RPL=0;RPP=94.2121;RPPR=736.968;RPR=42;RUN=1;SAF=41;SAP=85.7331;SAR=1;SRF=331;SRP=677.426;SRR=7;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:60:60,0:60:2323:0:0:0,-18.0618,-209.259 0/0:75:74,0:74:2821:0:0:0,-22.2762,-253.678 0/0:44:44,0:44:1674:0:0:0,-13.2453,-150.898 0/0:41:41,0:41:1610:0:0:0,-12.3422,-145.151 0/1:89:52,37:52:1990:37:1439:-102.971,0,-152.521 0/0:72:67,5:67:2568:5:204:0,-2.93013,-212.537 dDocent_Contig_513 209 . N G 414.378 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=11;CIGAR=1X;DP=11;DPB=11;DPRA=0;EPP=26.8965;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=431;QR=0;RO=0;RPL=11;RPP=26.8965;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 1/1:3:0,3:0:0:3:123:-11.4648,-0.90309,0 1/1:3:0,3:0:0:3:106:-9.88551,-0.90309,0 1/1:2:0,2:0:0:2:79:-7.49724,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_514 38 . A T 857.083 . AB=0.181818;ABP=331.89;AC=2;AF=0.166667;AN=12;AO=83;CIGAR=1X;DP=944;DPB=944;DPRA=1.275;EPP=183.243;EPPR=1872.65;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998839;PAO=0;PQA=0;PQR=0;PRO=0;QA=2721;QR=31739;RO=861;RPL=0;RPP=183.243;RPPR=1872.65;RPR=83;RUN=1;SAF=83;SAP=183.243;SAR=0;SRF=861;SRP=1872.65;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:111:106,5:106:3896:5:157:0,-18.9768,-336.315 0/0:160:151,9:151:5548:9:319:0,-19.1136,-470.262 0/1:235:201,34:201:7388:34:1101:-28.632,0,-594.027 0/1:139:105,34:105:3877:34:1105:-57.89,0,-307.196 0/0:128:128,0:128:4650:0:0:0,-38.5318,-418.561 0/0:171:170,1:170:6380:1:39:0,-47.5796,-570.22 dDocent_Contig_515 98 . N T 69.4833 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=2X;DP=2;DPB=3;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.21888;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=73;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:2:0,2:0:0:2:73:-6.9313,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_516 34 . G A 51.7996 . AB=0.113636;ABP=60.0608;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=295;DPB=295;DPRA=0.617424;EPP=20.3821;EPPR=626.223;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.125;PAIREDR=0.672474;PAO=0;PQA=0;PQR=0;PRO=0;QA=326;QR=11276;RO=287;RPL=0;RPP=20.3821;RPPR=626.223;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=287;SRP=626.223;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:34,1:34:1326:1:40:0,-6.54037,-115.617 0/0:59:59,0:59:2305:0:0:0,-17.7608,-207.628 0/0:47:46,1:46:1805:1:41:0,-10.0538,-158.583 0/1:44:39,5:39:1551:5:204:-5.49871,0,-126.59 0/0:37:36,1:36:1387:1:41:0,-7.04354,-120.999 0/0:73:73,0:73:2902:0:0:0,-21.9752,-261.291 dDocent_Contig_517 82 . G A 55755 . AB=0.666471;ABP=412.213;AC=8;AF=0.666667;AN=12;AO=1957;CIGAR=1X;DP=2558;DPB=2558;DPRA=0;EPP=4252.58;EPPR=1303.72;GTI=0;LEN=1;MEANALT=1.33333;MQM=58.9009;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.974451;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=69899;QR=21019;RO=599;RPL=1957;RPP=4252.58;RPPR=1303.72;RPR=0;RUN=1;SAF=1957;SAP=4252.58;SAR=0;SRF=599;SRP=1303.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:441:163,278:163:5670:278:9738:-735.867,0,-377.683 0/1:471:215,255:215:7474:255:8906:-632.28,0,-530.887 0/1:322:67,255:67:2386:255:9215:-700.122,0,-118.051 0/1:466:120,345:120:4258:345:12485:-973.521,0,-243.031 1/1:410:17,393:17:608:393:14058:-1201.95,-68.3724,0 1/1:448:17,431:17:623:431:15497:-1334.16,-78.4567,0 dDocent_Contig_518 20 . A T 1426.72 . AB=0.154762;ABP=176.935;AC=5;AF=0.416666;AN=12;AO=26;CIGAR=2X;DP=307;DPB=307;DPRA=1.51351;EPP=59.4686;EPPR=480.734;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.846154;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1033;QR=8638;RO=220;RPL=0;RPP=59.4686;RPPR=480.734;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=220;SRP=480.734;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:66:57,9,0:57:2258:9,0:357,0:-12.6251,0,-183.529,-29.7838,-186.238,-215.626 0|1:74:56,12,6:56:2174:12,6:479,232:-22.6014,0,-174.995,-20.4118,-159.556,-197.202 0|0:37:36,1,0:36:1425:1,0:29,0:0,-8.23845,-125.609,-10.8371,-125.91,-128.215 0|1:49:18,15,16:18:696:15,16:584,642:-47.4851,-4.93448,-57.5694,0,-9.18056,-52.3402 0|1:36:24,12,0:24:963:12,0:474,0:-32.1708,0,-76.1353,-39.3955,-79.7477,-118.747 0|1:45:29,12,4:29:1122:12,4:482,159:-30.9907,0,-88.524,-26.6309,-79.0443,-117.562 dDocent_Contig_519 98 . N C 721.128 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=24;CIGAR=1M2D9M2X;DP=25;DPB=195.714;DPRA=0;EPP=55.1256;EPPR=0;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=15;PQA=531;PQR=4296;PRO=125;QA=795;QR=0;RO=0;RPL=24;RPP=55.1256;RPPR=0;RPR=0;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:10:0,10:0:0:10:321:-28.8725,-3.0103,0 1|1:4:0,3:0:0:3:104:-9.35522,-0.90309,0 1|1:8:0,8:0:0:8:266:-23.9226,-2.40824,0 1|1:3:0,3:0:0:3:104:-9.35603,-0.90309,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_524 64 . A T 7875.82 . AB=0.152292;ABP=3485.25;AC=4;AF=0.333333;AN=12;AO=577;CIGAR=1X;DP=5428;DPB=5428;DPRA=0;EPP=1255.95;EPPR=10473.9;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.988031;PAO=0;PQA=0;PQR=0;PRO=0;QA=22675;QR=190487;RO=4846;RPL=577;RPP=1255.95;RPPR=10526;RPR=0;RUN=1;SAF=577;SAP=1255.95;SAR=0;SRF=4840;SRP=10473.9;SRR=6;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:714:500,214:500:19681:214:8419:-542.323,0,-1554.81 0/1:907:824,82:824:32240:82:3224:-17.2941,0,-2625.97 0/1:740:649,89:649:25587:89:3562:-98.2194,0,-2078.28 0/1:955:834,120:834:32852:120:4664:-132.15,0,-2666.27 0/0:1201:1131,69:1131:44492:69:2685:0,-119.527,-3758.58 0/0:911:908,3:908:35635:3:121:0,-262.958,-3192.82 dDocent_Contig_525 24 . G T 919.094 . AB=0.223404;ABP=127.939;AC=4;AF=0.333333;AN=12;AO=43;CIGAR=1X;DP=291;DPB=291;DPRA=0.72381;EPP=96.3836;EPPR=541.535;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.488372;PAIREDR=0.520161;PAO=0;PQA=0;PQR=0;PRO=0;QA=1702;QR=9817;RO=248;RPL=0;RPP=96.3836;RPPR=541.535;RPR=43;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=248;SRP=541.535;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:35,6:35:1367:6:241:-9.72465,0,-110.937 0/1:56:38,18:38:1497:18:699:-46.3691,0,-118.122 0/1:31:22,9:22:894:9:363:-23.7024,0,-71.4336 0/1:60:51,9:51:2039:9:358:-14.5186,0,-165.635 0/0:40:39,1:39:1534:1:41:0,-7.94663,-134.214 0/0:63:63,0:63:2486:0:0:0,-18.9649,-223.879 dDocent_Contig_526 98 . N T 1055.94 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=36;CIGAR=1X;DP=36;DPB=36;DPRA=0;EPP=81.1833;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1145;QR=0;RO=0;RPL=36;RPP=81.1833;RPPR=0;RPR=0;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 1/1:27:0,27:0:0:27:895:-80.8555,-8.12781,0 1/1:3:0,3:0:0:3:68:-6.34633,-0.90309,0 1/1:2:0,2:0:0:2:51:-4.84368,-0.60206,0 1/1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 1/1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 dDocent_Contig_528 20 . G A 9863.01 . AB=0.351504;ABP=206.802;AC=4;AF=0.333333;AN=12;AO=530;CIGAR=1X;DP=3789;DPB=3789;DPRA=0;EPP=1153.89;EPPR=7079.84;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999386;PAO=0;PQA=0;PQR=0;PRO=0;QA=20641;QR=128118;RO=3259;RPL=0;RPP=1153.89;RPPR=7079.84;RPR=530;RUN=1;SAF=530;SAP=1153.89;SAR=0;SRF=3259;SRP=7079.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:195:112,83:112:4419:83:3198:-229.211,0,-338.986 0/1:310:209,101:209:8146:101:3892:-257.006,0,-639.453 0/1:248:185,63:185:7276:63:2489:-149.515,0,-579.876 0/1:311:184,127:184:7269:127:4963:-352.974,0,-560.286 0/0:1460:1405,55:1405:55295:55:2136:0,-247.065,-4779.21 0/0:1265:1164,101:1164:45713:101:3963:0,-24.1046,-3753.55 dDocent_Contig_529 47 . G C 282.698 . AB=0.110032;ABP=411.17;AC=2;AF=0.166667;AN=12;AO=44;CIGAR=1X;DP=1553;DPB=1553;DPRA=0.669892;EPP=98.5551;EPPR=2506.55;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1742;QR=59715;RO=1509;RPL=0;RPP=98.5551;RPPR=2506.55;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=1509;SRP=3279.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:227:227,0:227:9041:0:0:0,-68.3338,-813.16 0/0:321:321,0:321:12652:0:0:0,-96.6306,-1137.81 0/0:314:304,10:304:12038:10:393:0,-58.804,-1046.87 0/0:382:382,0:382:15078:0:0:0,-114.993,-1355.91 0/1:191:175,16:175:6935:16:647:-1.06737,0,-566.337 0/1:118:100,18:100:3971:18:702:-27.9789,0,-321.854 dDocent_Contig_530 17 . T C 12618.6 . AB=0.255222;ABP=1024.61;AC=4;AF=0.333333;AN=12;AO=504;CIGAR=2M1X1M;DP=2211;DPB=2201.5;DPRA=0;EPP=1097.43;EPPR=3646.74;GTI=0;LEN=1;MEANALT=2.66667;MQM=59.9008;MQMR=59.7074;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.995232;PAO=0;PQA=0;PQR=0;PRO=0;QA=20091;QR=65741;RO=1678;RPL=0;RPP=1097.43;RPPR=3646.74;RPR=504;RUN=1;SAF=504;SAP=1097.43;SAR=0;SRF=1678;SRP=3646.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:489:370,0,118:370:14465:0,118:0,4706:-276.083,-387.464,-1573.2,0,-1185.72,-1150.2 0|1:586:404,0,180:404:15869:0,180:0,7157:-467.608,-589.224,-1892.94,0,-1303.84,-1249.65 0|1:291:214,0,73:214:8450:0,73:0,2917:-175.853,-240.274,-935.422,0,-695.241,-673.266 0|1:413:283,0,128:283:11058:0,128:0,5112:-335.841,-421.032,-1327.58,0,-906.567,-868.036 0|0:184:163,19,2:163:6392:19,2:717,79:-9.67632,0,-519.844,-52.2416,-519.062,-577.219 0|0:248:244,0,3:244:9507:0,3:0,120:0,-73.4513,-854.796,-63.5512,-844.911,-844.008 dDocent_Contig_531 7 . T C 1679.09 . AB=0.148615;ABP=854.545;AC=5;AF=0.416667;AN=12;AO=130;CIGAR=1X;DP=961;DPB=961;DPRA=0;EPP=285.302;EPPR=1803.16;GTI=0;LEN=1;MEANALT=1.33333;MQM=59.5154;MQMR=59.9638;NS=6;NUMALT=1;ODDS=0;PAIRED=0.976923;PAIREDR=0.915561;PAO=0;PQA=0;PQR=0;PRO=0;QA=5008;QR=31544;RO=829;RPL=0;RPP=285.302;RPPR=1803.16;RPR=130;RUN=1;SAF=130;SAP=285.302;SAR=0;SRF=829;SRP=1803.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:146:118,28:118:4481:28:1082:-53.7296,0,-359.403 0/0:167:154,12:154:5851:12:460:0,-8.34338,-484.832 0/1:182:163,19:163:6196:19:738:-11.9637,0,-502.796 0/1:127:106,21:106:4029:21:798:-33.914,0,-324.477 0/1:172:136,35:136:5205:35:1353:-69.508,0,-416.594 0/1:167:152,15:152:5782:15:577:-1.99077,0,-470.071 dDocent_Contig_532 30 . G T 6178.65 . AB=0.156943;ABP=2491.1;AC=3;AF=0.25;AN=12;AO=486;CIGAR=1X;DP=4833;DPB=4833;DPRA=0;EPP=1058.35;EPPR=9442.4;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99908;PAO=0;PQA=0;PQR=0;PRO=0;QA=19127;QR=171549;RO=4347;RPL=0;RPP=1058.35;RPPR=9442.4;RPR=486;RUN=1;SAF=486;SAP=1058.35;SAR=0;SRF=4347;SRP=9442.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:654:565,89:565:22267:89:3548:-122.49,0,-1805.36 0/1:899:710,189:710:28063:189:7384:-393.632,0,-2252.7 0/0:587:538,49:538:21252:49:1939:0,-1.98244,-1736.26 0/1:881:777,104:777:30588:104:4095:-103.353,0,-2485.14 0/0:995:975,20:975:38435:20:791:0,-228.014,-3384.3 0/0:817:782,35:782:30944:35:1370:0,-122.375,-2658.72 dDocent_Contig_533 12 . G A 52359.8 . AB=0.491136;ABP=5.47411;AC=6;AF=0.5;AN=12;AO=1773;CIGAR=1X;DP=3610;DPB=3610;DPRA=0;EPP=3853.03;EPPR=3987.66;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.962211;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=70346;QR=73265;RO=1835;RPL=0;RPP=3853.03;RPPR=3987.66;RPR=1773;RUN=1;SAF=1773;SAP=3853.03;SAR=0;SRF=1835;SRP=3987.66;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:480:186,294:186:7409:294:11657:-903.854,0,-521.942 0/1:457:308,149:308:12350:149:5907:-393.843,0,-973.016 0/1:361:148,212:148:5896:212:8386:-645.729,0,-421.857 0/1:572:137,435:137:5517:435:17231:-1377.27,0,-324.144 0/1:855:454,400:454:18101:400:15969:-1178.79,0,-1370.43 0/1:885:602,283:602:23992:283:11196:-740.486,0,-1890.78 dDocent_Contig_534 22 . T A 69.5899 . AB=0.114754;ABP=81.6461;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=191;DPB=191;DPRA=0.94898;EPP=22.5536;EPPR=398.218;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.824176;PAO=0;PQA=0;PQR=0;PRO=0;QA=360;QR=6970;RO=182;RPL=0;RPP=22.5536;RPPR=398.218;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=182;SRP=398.218;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:692:0:0:0,-5.41854,-62.6013 0/0:32:30,2:30:1138:2:81:0,-1.94723,-95.0301 0/1:25:21,4:21:829:4:160:-7.25717,0,-67.4026 0/1:36:33,3:33:1265:3:119:-0.25742,0,-103.294 0/0:28:28,0:28:1081:0:0:0,-8.42884,-97.5829 0/0:52:52,0:52:1965:0:0:0,-15.6536,-177.062 dDocent_Contig_535 76 . A C 591.954 . AB=0.108043;ABP=1114.58;AC=1;AF=0.0833333;AN=12;AO=119;CIGAR=1X;DP=4268;DPB=4268;DPRA=1.35008;EPP=261.416;EPPR=9003.76;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4553;QR=155080;RO=4145;RPL=119;RPP=261.416;RPPR=9003.76;RPR=0;RUN=1;SAF=119;SAP=261.416;SAR=0;SRF=4145;SRP=9003.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:535:534,0:534:19824:0:0:0,-160.75,-1782.85 0/0:753:752,0:752:28292:0:0:0,-226.375,-2544.65 0/0:613:611,0:611:22869:0:0:0,-183.929,-2056.71 0/0:647:647,0:647:24084:0:0:0,-194.766,-2166.31 0/0:887:858,29:858:32040:29:1107:0,-167.085,-2781.91 0/1:833:743,90:743:27971:90:3446:-59.5142,0,-2265.08 dDocent_Contig_536 25 . G T 1109.46 . AB=0.141264;ABP=604.387;AC=5;AF=0.416667;AN=12;AO=78;CIGAR=5M1X2M1X3M;DP=612;DPB=610;DPRA=0;EPP=172.385;EPPR=1088.75;GTI=0;LEN=1;MEANALT=3.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.998;PAO=0;PQA=0;PQR=0;PRO=0;QA=3053;QR=19159;RO=500;RPL=0;RPP=172.385;RPPR=1088.75;RPR=78;RUN=1;SAF=78;SAP=172.385;SAR=0;SRF=500;SRP=1088.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:74:66,2,1:66:2486:2,1:80,39:0,-13.2757,-216.359,-16.6626,-213.755,-220.045 0|1:83:64,10,7:64:2450:10,7:378,245:-11.7236,0,-198.057,-11.0699,-181.14,-210.012 0|1:194:151,29,0:151:5812:29,0:1162,0:-50.2802,0,-468.44,-95.7357,-477.17,-572.906 0|1:82:70,8,0:70:2705:8,0:310,0:-4.38524,0,-219.738,-25.4573,-222.146,-247.613 0|1:60:44,16,0:44:1702:16,0:631,0:-39.0657,0,-135.372,-52.311,-140.189,-192.108 0|1:119:105,13,0:105:4004:13,0:492,0:-8.69236,0,-324.512,-40.3005,-328.425,-368.754 dDocent_Contig_537 31 . T G 63.3686 . AB=0.148148;ABP=32.0437;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=156;DPB=156;DPRA=1.35484;EPP=13.8677;EPPR=330.903;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=199;QR=6055;RO=151;RPL=0;RPP=13.8677;RPPR=330.903;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=151;SRP=330.903;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:844:0:0:0,-6.32163,-76.2719 0/0:36:36,0:36:1446:0:0:0,-10.8371,-130.388 0/0:17:17,0:17:680:0:0:0,-5.11751,-61.5307 0/0:19:19,0:19:771:0:0:0,-5.71957,-69.7093 0/0:36:35,1:35:1387:1:39:0,-6.94052,-121.191 0/1:27:23,4:23:927:4:160:-6.65562,0,-75.605 dDocent_Contig_538 168 . C A 141.771 . AB=0.25;ABP=7.35324;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=1M3X2M1X4M1X1M1X;DP=166;DPB=184.857;DPRA=0.551724;EPP=7.35324;EPPR=150.67;GTI=0;LEN=1;MEANALT=4;MQM=40;MQMR=56.8529;NS=6;NUMALT=6;ODDS=0;PAIRED=1;PAIREDR=0.838235;PAO=1.42857;PQA=9.71429;PQR=22.0476;PRO=1.7619;QA=73;QR=2336;RO=68;RPL=2;RPP=7.35324;RPPR=150.67;RPR=0;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=150.67;SRR=68;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:16:11,0,0,0,0,1,0:11:364:0,0,0,0,1,0:0,0,0,0,41,0:0,-3.31133,-27.8336,-3.31133,-27.8336,-27.8336,-3.31133,-27.8336,-27.8336,-27.8336,-3.31133,-27.8336,-27.8336,-27.8336,-27.8336,-0.0215751,-24.546,-24.546,-24.546,-24.546,-24.245,-3.31133,-27.8336,-27.8336,-27.8336,-27.8336,-24.546,-27.8336 0|0:43:20,0,0,2,0,0,0:20:687:0,0,2,0,0,0:0,0,78,0,0,0:-0.0111993,-6.0318,-60.5282,-6.0318,-60.5282,-60.5282,0,-54.4964,-54.4964,-53.8944,-6.0318,-60.5282,-60.5282,-54.4964,-60.5282,-6.0318,-60.5282,-60.5282,-54.4964,-60.5282,-60.5282,-6.0318,-60.5282,-60.5282,-54.4964,-60.5282,-60.5282,-60.5282 0|0:13:4,0,0,0,0,0,0:4:140:0,0,0,0,0,0:0,0,0,0,0,0:0,-1.20412,-12.597,-1.20412,-12.597,-12.597,-1.20412,-12.597,-12.597,-12.597,-1.20412,-12.597,-12.597,-12.597,-12.597,-1.20412,-12.597,-12.597,-12.597,-12.597,-12.597,-1.20412,-12.597,-12.597,-12.597,-12.597,-12.597,-12.597 0|0:44:18,3,0,0,0,3,0:18:626:3,0,0,0,3,0:107,0,0,0,116,0:-3.87264,-0.95477,-50.9434,-9.29118,-51.8465,-60.184,-9.29118,-51.8465,-60.184,-60.184,-9.29118,-51.8465,-60.184,-60.184,-60.184,0,-42.5561,-50.8937,-50.8937,-50.8937,-49.9906,-9.29118,-51.8465,-60.184,-60.184,-60.184,-50.8937,-60.184 1|0:8:2,0,2,0,0,1,2:2:69:0,2,0,0,1,2:0,73,0,0,6,80:-6.0299,-6.63196,-12.2419,-0.943206,-6.55813,-5.95607,-6.63196,-12.2419,-6.55813,-12.2419,-6.63196,-12.2419,-6.55813,-12.2419,-12.2419,-6.66988,-12.2638,-6.59578,-12.2638,-12.2638,-11.9628,-0.0745037,-5.69725,0,-5.69725,-5.69725,-5.73177,-5.09519 0|0:42:13,0,0,0,3,3,0:13:450:0,0,0,3,3,0:0,0,0,114,121,0:-5.77759,-9.69098,-43.8298,-9.69098,-43.8298,-43.8298,-9.69098,-43.8298,-43.8298,-43.8298,-0.652564,-34.7924,-34.7924,-34.7924,-33.8893,0,-34.1407,-34.1407,-34.1407,-25.1026,-33.2376,-9.69098,-43.8298,-43.8298,-43.8298,-34.7924,-34.1407,-43.8298 dDocent_Contig_539 8 . T A 45972.9 . AB=0.834821;ABP=1747.94;AC=6;AF=0.5;AN=12;AO=1496;CIGAR=1X;DP=1792;DPB=1792;DPRA=0;EPP=3251.53;EPPR=645.766;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998663;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=57139;QR=11376;RO=296;RPL=0;RPP=3251.53;RPPR=645.766;RPR=1496;RUN=1;SAF=1496;SAP=3251.53;SAR=0;SRF=296;SRP=645.766;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:249:53,196:53:2053:196:7443:-594.782,0,-110.045 0/1:328:45,283:45:1708:283:10834:-875.927,0,-55.2427 0/1:333:57,276:57:2192:276:10562:-849.959,0,-97.2602 0/1:268:45,223:45:1725:223:8530:-686.796,0,-74.8293 0/1:360:38,322:38:1454:322:12338:-1001.54,0,-22.7651 0/1:254:58,196:58:2244:196:7432:-592.277,0,-125.714 dDocent_Contig_540 68 . C A 5026.34 . AB=0.178147;ABP=381.811;AC=2;AF=0.166667;AN=12;AO=75;CIGAR=1M1X4M;DP=1129;DPB=1015.67;DPRA=1.47719;EPP=165.871;EPPR=1907.39;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2956;QR=33859;RO=877;RPL=75;RPP=165.871;RPPR=1907.39;RPR=0;RUN=1;SAF=75;SAP=165.871;SAR=0;SRF=877;SRP=1907.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:91:56,35,0:56:2123:35,0:1292,0:-89.1746,0,-163.891,-106.032,-174.427,-280.087 0|0:205:189,12,0:189:7306:12,0:405,0:0,-24.0841,-620.567,-56.8947,-624.18,-656.991 0|1:126:101,12,13:101:3922:12,13:457,520:-12.4394,-5.36815,-323.997,0,-284.775,-318.345 0|0:332:220,111,0:220:8496:111,0:4137,0:-272.692,0,-664.619,-338.919,-698.033,-1036.66 0|1:295:232,0,62:232:8973:0,62:0,2436:-130.733,-200.572,-937.571,0,-737.225,-718.562 0|0:80:79,0,0:79:3039:0,0:0,0:0,-23.7814,-273.244,-23.7814,-273.244,-273.244 dDocent_Contig_541 7 . T C 2815 . AB=0.262156;ABP=235.422;AC=6;AF=0.5;AN=12;AO=124;CIGAR=1X;DP=473;DPB=473;DPRA=0;EPP=272.273;EPPR=758.683;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.0806;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.612903;PAIREDR=0.560345;PAO=0;PQA=0;PQR=0;PRO=0;QA=4784;QR=13356;RO=348;RPL=0;RPP=272.273;RPPR=758.683;RPR=124;RUN=1;SAF=124;SAP=272.273;SAR=0;SRF=348;SRP=758.683;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:74:54,20:54:2042:20:770:-42.7226,0,-161.74 0/1:91:77,13:77:2972:13:506:-18.4903,0,-240.249 0/1:66:53,13:53:2044:13:503:-25.7507,0,-164.326 0/1:75:51,24:51:1956:24:930:-61.4393,0,-153.705 0/1:67:49,18:49:1884:18:692:-42.4445,0,-149.638 0/1:100:64,36:64:2458:36:1383:-94.6496,0,-191.322 dDocent_Contig_542 107 . N T 123.182 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=128;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:92:-8.58462,-0.90309,0 1/1:2:0,2:0:0:2:36:-3.41967,-0.60206,0 dDocent_Contig_543 50 . G T 6859.19 . AB=0.251701;ABP=632.767;AC=2;AF=0.166667;AN=12;AO=296;CIGAR=1X;DP=2576;DPB=2576;DPRA=1.68;EPP=645.766;EPPR=4949.62;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11564;QR=88919;RO=2278;RPL=296;RPP=645.766;RPPR=4949.62;RPR=0;RUN=1;SAF=296;SAP=645.766;SAR=0;SRF=2278;SRP=4949.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:371:371,0:371:14371:0:0:0,-111.682,-1292.43 0/0:432:432,0:432:16951:0:0:0,-130.045,-1524.33 0/0:234:234,0:234:9137:0:0:0,-70.441,-821.826 0/0:363:363,0:363:14140:0:0:0,-109.274,-1271.65 0/1:656:472,182:472:18513:182:7119:-443.242,0,-1467.6 0/1:520:406,114:406:15807:114:4445:-243.491,0,-1264.99 dDocent_Contig_544 37 . T G 3941.77 . AB=0.155049;ABP=1589.5;AC=4;AF=0.333333;AN=12;AO=258;CIGAR=1X;DP=2410;DPB=2410;DPRA=0;EPP=563.25;EPPR=4654.3;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.910853;PAIREDR=0.968721;PAO=0;PQA=0;PQR=0;PRO=0;QA=10299;QR=85339;RO=2142;RPL=0;RPP=563.25;RPPR=4654.3;RPR=258;RUN=1;SAF=258;SAP=563.25;SAR=0;SRF=2142;SRP=4654.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:256:212,39:212:8496:39:1566:-65.2203,0,-688.19 0/1:544:446,98:446:17812:98:3893:-186.61,0,-1437.84 0/1:320:273,47:273:10846:47:1882:-73.2543,0,-879.081 0/1:415:358,54:358:14154:54:2175:-71.4981,0,-1148.39 0/0:377:372,3:372:14840:3:120:0,-102.101,-1323.23 0/0:498:481,17:481:19191:17:663:0,-89.9191,-1665.59 dDocent_Contig_545 107 . N T 150.834 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=147;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.64733,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_546 47 . G A 78.5253 . AB=0.147059;ABP=39.7976;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=164;DPB=164;DPRA=1.30769;EPP=13.8677;EPPR=348.274;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.773585;PAO=0;PQA=0;PQR=0;PRO=0;QA=197;QR=6162;RO=159;RPL=0;RPP=13.8677;RPPR=348.274;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=159;SRP=348.274;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:29,5:29:1117:5:197:-7.87026,0,-90.5673 0/0:30:30,0:30:1171:0:0:0,-9.0309,-105.668 0/0:21:21,0:21:841:0:0:0,-6.32163,-76.001 0/0:39:39,0:39:1507:0:0:0,-11.7402,-135.872 0/0:21:21,0:21:804:0:0:0,-6.32163,-72.66 0/0:19:19,0:19:722:0:0:0,-5.71957,-65.2951 dDocent_Contig_547 17 . G C 3451.13 . AB=0.413793;ABP=21.7299;AC=6;AF=0.5;AN=12;AO=120;CIGAR=1X;DP=290;DPB=290;DPRA=0;EPP=263.587;EPPR=372.161;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.6;PAIREDR=0.6;PAO=0;PQA=0;PQR=0;PRO=0;QA=4828;QR=6802;RO=170;RPL=0;RPP=263.587;RPPR=372.161;RPR=120;RUN=1;SAF=120;SAP=263.587;SAR=0;SRF=170;SRP=372.161;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:23,18:23:923:18:731:-53.7707,0,-71.0339 0/1:59:30,29:30:1198:29:1160:-86.9153,0,-90.333 0/1:51:38,13:38:1528:13:525:-32.2447,0,-122.403 0/1:55:36,19:36:1435:19:754:-51.6192,0,-112.839 0/1:36:11,25:11:443:25:1011:-80.4469,0,-29.3877 0/1:48:32,16:32:1275:16:647:-44.1134,0,-100.566 dDocent_Contig_548 27 . A G 4377.49 . AB=0.221591;ABP=595.477;AC=5;AF=0.416667;AN=12;AO=210;CIGAR=1X1M1X8M;DP=1178;DPB=1199;DPRA=0;EPP=459.02;EPPR=1926.93;GTI=0;LEN=1;MEANALT=6.16667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.998871;PAO=0;PQA=0;PQR=0;PRO=0;QA=8205;QR=34807;RO=886;RPL=0;RPP=459.02;RPPR=1926.93;RPR=210;RUN=1;SAF=210;SAP=459.02;SAR=0;SRF=886;SRP=1926.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:150:107,3,18,17:107:4216:3,18,17:115,691,649:-24.5067,-47.2789,-393.232,0,-337.421,-341.44,-3.47663,-340.896,-293.62,-345.217 0|1:200:166,4,27,0:166:6483:4,27,0:153,1067,0:-37.8431,-75.2605,-606.984,0,-520.383,-524.81,-87.8141,-608.188,-532.938,-620.743 0|0:298:267,2,15,6:267:10516:2,15,6:69,576,213:0,-74.7739,-939.302,-33.0858,-892.629,-893.716,-63.03,-922.556,-880.883,-926.353 0|1:195:161,3,23,3:161:6323:3,23,3:115,909,101:-26.3752,-65.4015,-584.556,0,-510.655,-513.17,-66.663,-577.278,-511.913,-585.814 0|1:174:87,9,76,0:87:3439:9,76,0:337,2961,0:-217.168,-215.76,-496.061,0,-255.424,-260.143,-243.357,-498.77,-283.021,-526.368 0|1:161:98,1,51,7:98:3830:1,51,7:40,2001,274:-135.057,-161.263,-475.826,0,-311.57,-299.513,-142.029,-453.598,-292.337,-454.786 dDocent_Contig_549 107 . N A 1890.53 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=71;CIGAR=1X;DP=71;DPB=71;DPRA=0;EPP=157.185;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.985915;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2073;QR=0;RO=0;RPL=0;RPP=157.185;RPPR=0;RPR=71;RUN=1;SAF=0;SAP=157.185;SAR=71;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:6:0,6:0:0:6:173:-15.8556,-1.80618,0 1/1:7:0,7:0:0:7:233:-21.2967,-2.10721,0 1/1:11:0,11:0:0:11:317:-28.8131,-3.31133,0 1/1:29:0,29:0:0:29:834:-75.3327,-8.72987,0 1/1:17:0,17:0:0:17:491:-44.4703,-5.11751,0 1/1:1:0,1:0:0:1:25:-2.49986,-0.30103,0 dDocent_Contig_550 107 . N C 777.755 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=26;CIGAR=1X;DP=26;DPB=26;DPRA=0;EPP=59.4686;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=838;QR=0;RO=0;RPL=0;RPP=59.4686;RPPR=0;RPR=26;RUN=1;SAF=0;SAP=59.4686;SAR=26;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:54:-5.12867,-0.60206,0 1/1:3:0,3:0:0:3:103:-9.61002,-0.90309,0 1/1:18:0,18:0:0:18:620:-56.1245,-5.41854,0 1/1:1:0,1:0:0:1:19:-1.89997,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 dDocent_Contig_551 46 . G A 52.0485 . AB=0.0925926;ABP=314.416;AC=2;AF=0.166667;AN=12;AO=32;CIGAR=1X2M1X;DP=1081;DPB=1081;DPRA=0.548097;EPP=48.8827;EPPR=2198.37;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.25;PAIREDR=0.0801187;PAO=0;PQA=0;PQR=0;PRO=0;QA=1234;QR=39074;RO=1011;RPL=0;RPP=72.4974;RPPR=2198.37;RPR=32;RUN=1;SAF=29;SAP=48.8827;SAR=3;SRF=1011;SRP=2198.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:112:97,9,6:97:3740:9,6:343,221:0,-1.05858,-305.45,-11.1419,-290.097,-316.424 0|1:117:106,11,0:106:4054:11,0:443,0:-5.00556,0,-329.693,-36.9147,-333.005,-369.519 0|0:79:78,1,0:78:3047:1,0:35,0:0,-20.2827,-270.847,-23.4803,-271.148,-273.995 0|1:99:90,9,0:90:3517:9,0:338,0:-0.965576,0,-286.813,-28.0583,-289.522,-317.204 0|0:385:361,2,18:361:13933:2,18:75,714:0,-102.528,-1246.07,-49.7703,-1187.9,-1188.63 0|0:289:279,0,0:279:10783:0,0:0,0:0,-83.9874,-969.543,-83.9874,-969.543,-969.543 dDocent_Contig_552 8 . T C 6768.11 . AB=0.410138;ABP=48.6713;AC=6;AF=0.5;AN=12;AO=267;CIGAR=1X;DP=651;DPB=651;DPRA=0;EPP=582.793;EPPR=834.684;GTI=0;LEN=1;MEANALT=1.16667;MQM=55.9288;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.775281;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10257;QR=14655;RO=383;RPL=0;RPP=582.793;RPPR=834.684;RPR=267;RUN=1;SAF=267;SAP=582.793;SAR=0;SRF=383;SRP=834.684;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:87:50,37:50:1908:37:1406:-97.1823,0,-145.771 0/1:125:85,39:85:3241:39:1510:-89.0577,0,-254.116 0/1:94:45,49:45:1722:49:1874:-129.796,0,-126.937 0/1:134:73,61:73:2819:61:2362:-166.301,0,-213.547 0/1:119:76,43:76:2897:43:1658:-110.955,0,-225.081 0/1:92:54,38:54:2068:38:1447:-87.5161,0,-158.658 dDocent_Contig_553 26 . A C 5718.73 . AB=0.318584;ABP=196.829;AC=4;AF=0.333333;AN=12;AO=216;CIGAR=1X;DP=1292;DPB=1292;DPRA=0.552117;EPP=472.048;EPPR=2339.51;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8641;QR=42972;RO=1076;RPL=0;RPP=472.048;RPPR=2339.51;RPR=216;RUN=1;SAF=216;SAP=472.048;SAR=0;SRF=1076;SRP=2339.51;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:123:62,61:62:2502:61:2409:-179.932,0,-188.287 0/1:220:151,69:151:6050:69:2765:-182.734,0,-478.04 0/1:132:105,27:105:4207:27:1095:-59.096,0,-338.852 0/1:203:144,59:144:5732:59:2372:-152.516,0,-454.573 0/0:301:301,0:301:12003:0:0:0,-90.61,-1079.43 0/0:313:313,0:313:12478:0:0:0,-94.2224,-1122.12 dDocent_Contig_554 25 . C T 2222.63 . AB=0.319392;ABP=77.5257;AC=6;AF=0.5;AN=12;AO=84;CIGAR=1X;DP=263;DPB=263;DPRA=0;EPP=185.414;EPPR=391.704;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.75;PAIREDR=0.865922;PAO=0;PQA=0;PQR=0;PRO=0;QA=3371;QR=7113;RO=179;RPL=0;RPP=185.414;RPPR=391.704;RPR=84;RUN=1;SAF=84;SAP=185.414;SAR=0;SRF=179;SRP=391.704;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:17,15:17:680:15:600:-44.7056,0,-51.8923 0/1:63:32,31:32:1267:31:1248:-93.6251,0,-95.321 0/1:55:40,15:40:1589:15:612:-38.8605,0,-126.685 0/1:40:33,7:33:1307:7:278:-13.3472,0,-105.851 0/1:44:39,5:39:1562:5:198:-4.94969,0,-127.569 0/1:29:18,11:18:708:11:435:-30.7718,0,-55.3125 dDocent_Contig_555 37 . C A 9721.31 . AB=0.20283;ABP=1791.77;AC=4;AF=0.333333;AN=12;AO=542;CIGAR=1X;DP=3942;DPB=3942;DPRA=0;EPP=1179.95;EPPR=7381.67;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=0.994465;PAIREDR=0.999411;PAO=0;PQA=0;PQR=0;PRO=0;QA=21291;QR=135463;RO=3398;RPL=0;RPP=1179.95;RPPR=7381.67;RPR=542;RUN=1;SAF=542;SAP=1179.95;SAR=0;SRF=3398;SRP=7381.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:489:375,114:375:14985:114:4488:-256.679,0,-1200.28 0/1:592:455,136:455:18147:136:5319:-300.286,0,-1453.4 0/1:636:514,122:514:20405:122:4858:-245.673,0,-1643.24 0/1:615:513,101:513:20433:101:3968:-171.899,0,-1652.03 0/0:814:801,13:801:31930:13:469:0,-202.503,-2828.22 0/0:796:740,56:740:29563:56:2189:0,-42.4255,-2460.77 dDocent_Contig_556 22 . C A 665.344 . AB=0.0732159;ABP=1710.08;AC=1;AF=0.0833333;AN=12;AO=173;CIGAR=1X1M4I5M;DP=3253;DPB=3352.43;DPRA=0;EPP=378.675;EPPR=5861.8;GTI=0;LEN=1;MEANALT=7.83333;MQM=60;MQMR=59.9197;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.992663;PAO=0;PQA=0;PQR=0;PRO=0;QA=6871;QR=107518;RO=2726;RPL=0;RPP=378.675;RPPR=5922.44;RPR=173;RUN=1;SAF=173;SAP=378.675;SAR=0;SRF=2719;SRP=5861.8;SRR=7;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:510:427,16,22:427:16709:16,22:638,879:0,-75.9989,-1444.92,-56.1416,-1377.34,-1423.26 0|0:702:598,31,52:598:23593:31,52:1217,2084:0,-79.9329,-2009.93,-8.32482,-1847.58,-1932.01 0|0:364:294,19,23:294:11600:19,23:757,931:0,-26.1675,-974.77,-11.7377,-903.725,-959.138 0|0:494:403,21,45:403:15923:21,45:836,1781:-25.2433,-77.7211,-1381.67,0,-1241.43,-1296.72 0|1:585:492,58,6:492:19473:58,6:2310,244:-42.1047,0,-1584.88,-170.084,-1582.21,-1770.62 0|0:598:512,28,41:512:20220:28,41:1113,1654:0,-62.4933,-1717.83,-17.7863,-1589.92,-1669.22 dDocent_Contig_557 39 . G A 1210.44 . AB=0.0167598;ABP=366.083;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1M1X;DP=475;DPB=475;DPRA=0;EPP=39.9253;EPPR=832.513;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=647;QR=14533;RO=382;RPL=0;RPP=39.9253;RPPR=832.513;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=382;SRP=832.513;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:59:51,0,7,1:51:1897:0,7,1:0,274,41:-7.16087,-22.5134,-177.725,0,-155.194,-153.086,-19.127,-174.341,-151.809,-174.04 0|0:102:92,0,4,6:92:3522:0,4,6:0,152,236:0,-27.6948,-316.676,-15.2348,-304.211,-303.007,-8.27477,-297.264,-284.799,-295.458 0|0:84:75,0,6,3:75:2861:0,6,3:0,239,116:0,-22.5772,-257.244,-2.8888,-237.562,-235.756,-13.0542,-247.717,-228.035,-246.814 0|1:120:64,48,6,2:64:2409:48,6,2:1650,220,77:-114.697,0,-182.907,-115.985,-179.382,-311.548,-127.64,-191.034,-307.032,-324.406 0|0:49:46,2,0,1:46:1746:2,0,1:73,0,40:0,-7.90631,-150.45,-13.8474,-151.052,-157.016,-10.5407,-147.757,-153.721,-153.42 0|0:61:54,0,3,4:54:2098:0,3,4:0,121,137:0,-16.2556,-188.663,-6.25542,-178.688,-177.784,-5.17157,-177.547,-167.572,-176.343 dDocent_Contig_558 98 . N G 275.955 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=13;CIGAR=1X;DP=13;DPB=13;DPRA=0;EPP=31.2394;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=285;QR=0;RO=0;RPL=13;RPP=31.2394;RPPR=0;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:79:-7.30606,-1.20412,0 1/1:2:0,2:0:0:2:40:-3.79918,-0.60206,0 1/1:2:0,2:0:0:2:65:-6.17353,-0.60206,0 1/1:4:0,4:0:0:4:66:-6.10371,-1.20412,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_559 49 . G C 19539.8 . AB=0.65109;ABP=193.958;AC=6;AF=0.5;AN=12;AO=627;CIGAR=1X;DP=963;DPB=963;DPRA=0;EPP=1338.59;EPPR=732.625;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.995215;PAIREDR=0.997024;PAO=0;PQA=0;PQR=0;PRO=0;QA=24979;QR=13370;RO=336;RPL=3;RPP=1338.59;RPPR=732.625;RPR=624;RUN=1;SAF=627;SAP=1364.52;SAR=0;SRF=336;SRP=732.625;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:143:57,86:57:2282:86:3392:-262.28,0,-162.49 0/1:182:83,99:83:3320:99:3938:-299.624,0,-244.069 0/1:109:43,66:43:1700:66:2630:-204.01,0,-120.41 0/1:182:53,129:53:2097:129:5117:-405.612,0,-134.114 0/1:195:44,151:44:1742:151:6067:-487.076,0,-98.2949 0/1:152:56,96:56:2229:96:3835:-299.378,0,-155.022 dDocent_Contig_562 98 . N G 269.73 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=11;CIGAR=1X;DP=12;DPB=12;DPRA=0;EPP=26.8965;EPPR=0;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=276;QR=0;RO=0;RPL=11;RPP=26.8965;RPPR=0;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:72:-6.71895,-0.90309,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:5:0,4:0:0:4:68:-6.19896,-1.20412,0 1/1:2:0,2:0:0:2:67:-6.36304,-0.60206,0 dDocent_Contig_563 26 . G A 727.393 . AB=0.103976;ABP=448.468;AC=2;AF=0.166667;AN=12;AO=40;CIGAR=1X1M;DP=625;DPB=625;DPRA=1;EPP=89.8692;EPPR=1166.92;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1595;QR=20923;RO=536;RPL=0;RPP=89.8692;RPPR=1166.92;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=536;SRP=1166.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:90:80,10,0:80:3110:10,0:362,0:-5.81657,0,-252.931,-29.899,-255.941,-285.476 0|0:124:110,13,1:110:4299:13,1:511,40:-8.90898,0,-349.487,-38.7267,-350.105,-391.833 0|0:101:88,7,6:88:3451:7,6:272,240:0,-4.14754,-285.816,-6.71598,-268.153,-288.696 0|0:107:99,8,0:99:3824:8,0:315,0:0,-3.49413,-315.505,-29.802,-317.913,-343.828 0|1:90:74,6,10:74:2880:6,10:240,394:-10.1319,-12.6362,-247.5,0,-216.894,-233.654 0|1:113:85,5,23:85:3359:5,23:197,921:-50.2872,-59.6706,-334.573,0,-260.208,-269.49 dDocent_Contig_564 11 . G C 10884.3 . AB=0.232986;ABP=1249.61;AC=4;AF=0.333333;AN=12;AO=527;CIGAR=1X;DP=4210;DPB=4210;DPRA=0;EPP=1147.38;EPPR=7991.86;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999728;PAO=0;PQA=0;PQR=0;PRO=0;QA=21170;QR=147053;RO=3679;RPL=0;RPP=1147.38;RPPR=7991.86;RPR=527;RUN=1;SAF=527;SAP=1147.38;SAR=0;SRF=3679;SRP=7991.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:479:356,123:356:14139:123:4923:-298.766,0,-1127.25 0/1:659:456,203:456:18231:203:8151:-534.737,0,-1440.91 0/1:320:224,96:224:8963:96:3882:-253.029,0,-709.779 0/1:555:508,47:508:20240:47:1902:-4.30328,0,-1652.81 0/0:1165:1140,23:1140:45628:23:930:0,-266.486,-4018.1 0/0:1032:995,35:995:39852:35:1382:0,-185.728,-3458.24 dDocent_Contig_565 14 . C T 4733.29 . AB=0.269802;ABP=188.961;AC=3;AF=0.25;AN=12;AO=109;CIGAR=2X1M1X;DP=404;DPB=404;DPRA=0;EPP=214.36;EPPR=246.215;GTI=0;LEN=1;MEANALT=3.83333;MQM=57.4312;MQMR=60;NS=6;NUMALT=4;ODDS=1.11022e-16;PAIRED=0.743119;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4253;QR=4438;RO=112;RPL=0;RPP=239.701;RPPR=246.215;RPR=109;RUN=1;SAF=106;SAP=214.36;SAR=3;SRF=112;SRP=246.215;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:46:7,1,11,21,6:7:283:1,11,21,6:41,443,827,232:-78.984,-77.7068,-100.74,-44.5758,-64.526,-64.5992,-13.1808,-33.1304,0,-30.1933,-62.0382,-81.9875,-48.8576,-17.4644,-83.5657 0|0:86:33,16,18,17,2:33:1306:16,18,17,2:631,716,645,82:-49.0209,-7.03906,-109.707,0,-55.5699,-102.067,-6.09596,-61.663,-54.6248,-108.459,-52.186,-107.755,-100.717,-106.808,-159.067 0|1:40:10,3,10,16,1:10:393:3,10,16,1:120,399,635,37:-49.7501,-42.875,-74.2963,-19.9001,-42.3388,-49.2141,-0.538223,-22.9761,0,-28.0453,-49.7343,-72.173,-49.1983,-29.8359,-81.7573 0|1:113:20,19,15,48,11:20:799:19,15,48,11:749,594,1870,445:-146.947,-91.3491,-151.442,-104.159,-108.353,-165.456,0,-4.19458,-17.0043,-51.3619,-116.276,-120.47,-133.28,-29.1196,-178.777 0|0:40:7,24,5,2,2:7:267:24,5,2,2:926,204,78,82:-73.9218,0,-14.6687,-59.1941,-5.05366,-79.5879,-70.3296,-16.1972,-75.3933,-91.6255,-69.2595,-15.1224,-74.3234,-85.4582,-90.556 0|0:79:35,28,11,5,0:35:1390:28,11,5,0:1086,425,198,0:-78.6817,0,-106.011,-54.6063,-79.8297,-165.732,-72.92,-98.1428,-152.747,-185.853,-89.2177,-114.44,-169.043,-187.358,-203.655 dDocent_Contig_566 14 . T C 33937.7 . AB=0.482702;ABP=9.32081;AC=6;AF=0.5;AN=12;AO=1172;CIGAR=1X;DP=2428;DPB=2428;DPRA=0;EPP=2547.98;EPPR=2728.21;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=45894;QR=48802;RO=1255;RPL=0;RPP=2547.98;RPPR=2728.21;RPR=1172;RUN=1;SAF=1172;SAP=2547.98;SAR=0;SRF=1255;SRP=2728.21;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:366:130,236:130:5064:236:9198:-717.228,0,-345.532 0/1:367:129,237:129:5006:237:9307:-726.645,0,-339.946 0/1:415:252,163:252:9757:163:6381:-449.191,0,-752.771 0/1:394:189,205:189:7311:205:8048:-605.387,0,-539.146 0/1:473:302,171:302:11811:171:6707:-461.031,0,-919.947 0/1:413:253,160:253:9853:160:6253:-438.285,0,-761.962 dDocent_Contig_567 19 . T G 6262.62 . AB=0.325103;ABP=196.7;AC=5;AF=0.416667;AN=12;AO=237;CIGAR=1X2M;DP=893;DPB=893;DPRA=0.889024;EPP=517.649;EPPR=1407.95;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.848101;PAIREDR=0.867079;PAO=0;PQA=0;PQR=0;PRO=0;QA=9395;QR=25549;RO=647;RPL=0;RPP=517.649;RPPR=1407.95;RPR=237;RUN=1;SAF=237;SAP=517.649;SAR=0;SRF=647;SRP=1407.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:100:72,28:72:2823:28:1117:-70.712,0,-224.099 0|1:169:135,34:135:5306:34:1333:-69.3611,0,-426.572 0|0:164:164,0:164:6538:0:0:0,-49.3689,-588.16 0|1:228:198,30:198:7801:30:1198:-39.4596,0,-633.115 0|1:71:29,42:29:1158:42:1679:-129.963,0,-83.13 0|1:161:49,103:49:1923:103:4068:-319.967,0,-127.129 dDocent_Contig_568 16 . G T 136.346 . AB=0.0995261;ABP=296.941;AC=1;AF=0.0833333;AN=12;AO=46;CIGAR=1X;DP=1954;DPB=1954;DPRA=0.910068;EPP=102.898;EPPR=4146.18;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1864;QR=75561;RO=1908;RPL=0;RPP=102.898;RPPR=4146.18;RPR=46;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=1908;SRP=4146.18;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:211:190,21:190:7505:21:854:-13.6524,0,-611.577 0/0:423:413,10:413:16454:10:400:0,-90.9767,-1443.22 0/0:376:376,0:376:14897:0:0:0,-113.187,-1339.61 0/0:297:282,15:282:11135:15:610:0,-34.1681,-946.179 0/0:272:272,0:272:10786:0:0:0,-81.8802,-970.042 0/0:375:375,0:375:14784:0:0:0,-112.886,-1329.47 dDocent_Contig_569 63 . A T 692.76 . AB=0.329114;ABP=23.0483;AC=4;AF=0.333333;AN=12;AO=26;CIGAR=1X;DP=107;DPB=107;DPRA=1.41071;EPP=59.4686;EPPR=178.9;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1044;QR=3221;RO=81;RPL=26;RPP=59.4686;RPPR=178.9;RPR=0;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=81;SRP=178.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:17,2:17:678:2:80:-1.87222,0,-55.6317 0/1:16:9,7:9:353:7:280:-20.7547,0,-27.3115 0/0:8:8,0:8:322:0:0:0,-2.40824,-29.3483 0/1:30:16,14:16:631:14:563:-41.9826,0,-48.0858 0/0:20:20,0:20:800:0:0:0,-6.0206,-72.317 0/1:14:11,3:11:437:3:121:-7.06578,0,-35.4679 dDocent_Contig_570 30 . G A 83424.8 . AB=0.829361;ABP=2968.23;AC=6;AF=0.5;AN=12;AO=2610;CIGAR=1X;DP=3147;DPB=3147;DPRA=0;EPP=5670.55;EPPR=1166.92;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999234;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=103356;QR=21399;RO=536;RPL=0;RPP=5670.55;RPPR=1166.92;RPR=2610;RUN=1;SAF=2610;SAP=5670.55;SAR=0;SRF=536;SRP=1166.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:389:69,320:69:2745:320:12658:-1021.24,0,-130.066 0/1:629:110,519:110:4414:519:20524:-1656.14,0,-207.844 0/1:289:43,246:43:1717:246:9787:-793.226,0,-67.7486 0/1:594:124,469:124:4905:469:18497:-1484.35,0,-262.421 0/1:662:77,585:77:3044:585:23181:-1885.05,0,-74.7509 0/1:584:113,471:113:4574:471:18709:-1506.48,0,-235.753 dDocent_Contig_571 28 . G C 29882 . AB=0.700219;ABP=480.387;AC=6;AF=0.5;AN=12;AO=960;CIGAR=1X;DP=1371;DPB=1371;DPRA=0;EPP=2087.62;EPPR=821.655;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0.996875;PAIREDR=0.997347;PAO=0;PQA=0;PQR=0;PRO=0;QA=37760;QR=14913;RO=377;RPL=0;RPP=2087.62;RPPR=821.655;RPR=960;RUN=1;SAF=960;SAP=2087.62;SAR=0;SRF=377;SRP=821.655;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:146:43,99:43:1686:99:3936:-311.111,0,-108.818 0/1:194:50,143:50:1980:143:5646:-449.482,0,-119.898 0/1:364:111,244:111:4403:244:9496:-746.854,0,-288.93 0/1:183:61,118:61:2431:118:4663:-365.313,0,-164.647 0/1:211:59,146:59:2375:146:5734:-453.79,0,-151.784 0/1:273:53,210:53:2038:210:8285:-665.651,0,-104.047 dDocent_Contig_572 8 . T C 4910.85 . AB=0.382536;ABP=60.6559;AC=6;AF=0.5;AN=12;AO=184;CIGAR=1X;DP=481;DPB=481;DPRA=0;EPP=402.561;EPPR=647.938;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=57.9731;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.684783;PAIREDR=0.723906;PAO=0;PQA=0;PQR=0;PRO=0;QA=7090;QR=11456;RO=297;RPL=0;RPP=402.561;RPPR=647.938;RPR=184;RUN=1;SAF=184;SAP=402.561;SAR=0;SRF=297;SRP=647.938;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:55:26,29:26:1007:29:1114:-84.005,0,-74.3836 0/1:93:44,49:44:1699:49:1887:-142.079,0,-123.892 0/1:71:37,34:37:1422:34:1321:-97.803,0,-106.143 0/1:87:57,30:57:2197:30:1156:-78.1478,0,-170.482 0/1:93:66,27:66:2533:27:1044:-66.2725,0,-196.212 0/1:82:67,15:67:2598:15:568:-26.7744,0,-206.453 dDocent_Contig_573 18 . T A 2503.96 . AB=0.276712;ABP=161.076;AC=5;AF=0.416667;AN=12;AO=105;CIGAR=1X;DP=425;DPB=425;DPRA=0;EPP=231.015;EPPR=697.881;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.92381;PAIREDR=0.903125;PAO=0;PQA=0;PQR=0;PRO=0;QA=4181;QR=12289;RO=320;RPL=0;RPP=231.015;RPPR=697.881;RPR=105;RUN=1;SAF=105;SAP=231.015;SAR=0;SRF=320;SRP=697.881;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:32,9:32:1209:9:357:-20.1498,0,-96.7555 0/1:96:62,34:62:2391:34:1357:-93.4915,0,-186.479 0/1:63:50,13:50:1958:13:520:-28.1823,0,-157.465 0/1:70:50,20:50:1952:20:780:-49.4468,0,-154.824 0/0:60:56,4:56:2149:4:160:0,-3.27837,-178.811 0/1:95:70,25:70:2630:25:1007:-62.3273,0,-208.263 dDocent_Contig_575 22 . T A 705.981 . AB=0.0299728;ABP=707.26;AC=0;AF=0;AN=12;AO=222;CIGAR=5M1D1X7M;DP=4400;DPB=4232.07;DPRA=0;EPP=485.077;EPPR=8282.83;GTI=0;LEN=1;MEANALT=10.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.990991;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8782;QR=149209;RO=3813;RPL=0;RPP=485.077;RPPR=8282.83;RPR=222;RUN=1;SAF=222;SAP=485.077;SAR=0;SRF=3813;SRP=8282.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:367:298,11,53,0:298:11579:11,53,0:410,1960,0:-70.6158,-126.775,-1074.92,0,-917.93,-935.521,-160.323,-1078.23,-951.475,-1111.78 0|0:539:467,12,40,0:467:18190:12,40,0:485,1486,0:0,-100.588,-1591.99,-18.9817,-1474.01,-1501.96,-140.581,-1595.6,-1514,-1635.59 0|0:713:630,28,30,0:630:24679:28,30,0:1115,971,0:0,-97.8259,-2118.73,-111.347,-2048.84,-2131.61,-189.649,-2127.16,-2140.64,-2218.96 0|0:567:496,12,39,0:496:19407:12,39,0:432,1358,0:0,-114.083,-1706.15,-38.9274,-1599.37,-1622.86,-149.311,-1709.76,-1634.6,-1744.99 0|0:1207:1056,90,8,36:1056:41269:90,8,36:3591,303,1439:0,-22.155,-3387.84,-293.049,-3390.09,-3683.4,-199.354,-3296.4,-3567.28,-3581.28 0|0:1007:866,69,7,53:866:34085:69,7,53:2749,251,2064:0,-34.3218,-2817.49,-240.224,-2817.79,-3042.05,-91.0746,-2668.64,-2874.54,-2879.05 dDocent_Contig_576 28 . A T 2242.77 . AB=0.171034;ABP=684.49;AC=5;AF=0.416667;AN=12;AO=130;CIGAR=1X;DP=838;DPB=838;DPRA=0;EPP=285.302;EPPR=1514.47;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.984615;PAIREDR=0.973164;PAO=0;PQA=0;PQR=0;PRO=0;QA=5167;QR=28316;RO=708;RPL=0;RPP=285.302;RPPR=1540.41;RPR=130;RUN=1;SAF=130;SAP=285.302;SAR=0;SRF=705;SRP=1514.47;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:113:107,6:107:4281:6:231:0,-12.8632,-364.09 0/1:241:216,25:216:8631:25:995:-17.2959,0,-703.739 0/1:83:69,14:69:2762:14:564:-26.1168,0,-223.704 0/1:141:116,25:116:4641:25:1007:-48.4797,0,-375.162 0/1:155:114,41:114:4547:41:1623:-99.6438,0,-362.489 0/1:105:86,19:86:3454:19:747:-35.9419,0,-279.291 dDocent_Contig_577 98 . N C 401.65 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=13;CIGAR=1X;DP=13;DPB=13;DPRA=0;EPP=31.2394;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=420;QR=0;RO=0;RPL=13;RPP=31.2394;RPPR=0;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 1/1:5:0,5:0:0:5:170:-15.6347,-1.50515,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:4:0,4:0:0:4:112:-10.3578,-1.20412,0 dDocent_Contig_578 11 . C G 222.809 . AB=0.122581;ABP=194.786;AC=1;AF=0.0833333;AN=12;AO=26;CIGAR=1X;DP=1968;DPB=1968;DPRA=0.5987;EPP=59.4686;EPPR=4220.01;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1043;QR=77983;RO=1942;RPL=0;RPP=59.4686;RPPR=4220.01;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=1942;SRP=4220.01;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:242:242,0:242:9698:0:0:0,-72.8493,-872.162 0/0:307:302,5:302:12107:5:198:0,-74.2212,-1070.52 0/1:155:136,19:136:5484:19:766:-22.5996,0,-446.7 0/0:275:273,2:273:11012:2:79:0,-75.286,-982.78 0/0:555:555,0:555:22289:0:0:0,-167.072,-2004.01 0/0:434:434,0:434:17393:0:0:0,-130.647,-1563.89 dDocent_Contig_579 12 . T C 4522.95 . AB=0.506757;ABP=3.12768;AC=5;AF=0.416667;AN=12;AO=151;CIGAR=1X1M;DP=327;DPB=327;DPRA=0;EPP=330.903;EPPR=354.789;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6039;QR=6443;RO=162;RPL=0;RPP=330.903;RPPR=354.789;RPR=151;RUN=1;SAF=151;SAP=330.903;SAR=0;SRF=162;SRP=354.789;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:37:7,0,30:7:285:0,30:0,1211:-98.1227,-100.23,-123.741,0,-23.9172,-14.8863 0|1:66:25,12,29:25:999:12,29:469,1166:-88.568,-57.5436,-136.213,0,-43.7386,-73.5593 0|1:60:7,0,53:7:275:0,53:0,2104:-171.469,-173.576,-196.19,0,-23.0065,-7.05187 0|1:43:18,2,23:18:722:2,23:79,916:-70.0055,-68.9237,-127.809,0,-52.9916,-52.5679 0|1:90:75,0,15:75:2989:0,15:0,601:-27.3316,-49.9089,-296.038,0,-246.529,-242.013 0|0:31:30,0,1:30:1173:0,1:0,41:0,-9.0309,-105.437,-5.23736,-102.052,-101.751 dDocent_Contig_580 17 . T C 3430.72 . AB=0.489362;ABP=3.24131;AC=3;AF=0.25;AN=12;AO=119;CIGAR=1X;DP=326;DPB=326;DPRA=3.78947;EPP=261.416;EPPR=452.505;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4770;QR=8232;RO=207;RPL=0;RPP=261.416;RPPR=452.505;RPR=119;RUN=1;SAF=119;SAP=261.416;SAR=0;SRF=207;SRP=452.505;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:53:49,4:49:1919:4:162:0,-0.987634,-157.934 0/1:80:58,22:58:2311:22:888:-56.145,0,-184.069 0/1:56:23,33:23:928:33:1304:-100.757,0,-66.9645 0/1:99:39,60:39:1543:60:2416:-187.778,0,-109.3 0/0:5:5,0:5:200:0:0:0,-1.50515,-18.379 0/0:33:33,0:33:1331:0:0:0,-9.93399,-120.048 dDocent_Contig_581 1 . N G 233.293 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=235;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 1/1:2:0,2:0:0:2:73:-6.9311,-0.60206,0 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 1/1:1:0,1:0:0:1:39:-3.89656,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_582 58 . C T 1771.55 . AB=0.271642;ABP=154.748;AC=4;AF=0.333333;AN=12;AO=99;CIGAR=1X;DP=446;DPB=446;DPRA=0;EPP=217.986;EPPR=752.168;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.93913;PAO=0;PQA=0;PQR=0;PRO=0;QA=3361;QR=11839;RO=345;RPL=99;RPP=217.986;RPPR=752.168;RPR=0;RUN=1;SAF=99;SAP=217.986;SAR=0;SRF=345;SRP=752.168;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:53:48,5:48:1644:5:163:0,-0.963474,-133.258 0/1:72:60,11:60:2079:11:378:-12.72,0,-165.762 0/1:59:49,10:49:1678:10:346:-13.7138,0,-133.546 0/0:58:55,3:55:1884:3:99:0,-8.22262,-160.604 0/1:110:63,46:63:2158:46:1572:-108.844,0,-161.565 0/1:94:70,24:70:2396:24:803:-44.2814,0,-187.605 dDocent_Contig_583 36 . A G 388.845 . AB=0.118012;ABP=411.112;AC=2;AF=0.166667;AN=12;AO=101;CIGAR=1X;DP=1942;DPB=1942;DPRA=0;EPP=222.329;EPPR=4000.69;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996741;PAO=0;PQA=0;PQR=0;PRO=0;QA=3977;QR=72379;RO=1841;RPL=0;RPP=222.329;RPPR=4000.69;RPR=101;RUN=1;SAF=101;SAP=222.329;SAR=0;SRF=1841;SRP=4000.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:389:364,25:364:14236:25:969:0,-29.6002,-1192.77 0/0:586:585,1:585:23113:1:40:0,-172.408,-2074.26 0/1:236:208,28:208:8199:28:1124:-30.4025,0,-666.444 0/0:472:436,36:436:17141:36:1416:0,-14.3952,-1413.7 0/1:86:76,10:76:2950:10:387:-9.29564,0,-239.721 0/0:173:172,1:172:6740:1:41:0,-47.9836,-602.242 dDocent_Contig_584 62 . G T 67.5538 . AB=0.0909091;ABP=418.749;AC=2;AF=0.166667;AN=12;AO=43;CIGAR=1X;DP=749;DPB=749;DPRA=0;EPP=96.3836;EPPR=1533.9;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.976744;PAIREDR=0.975887;PAO=0;PQA=0;PQR=0;PRO=0;QA=1715;QR=27377;RO=705;RPL=43;RPP=96.3836;RPPR=1533.9;RPR=0;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=705;SRP=1533.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:133:128,4:128:4860:4:155:0,-25.5539,-423.087 0/1:157:143,14:143:5609:14:554:-2.93981,0,-457.409 0/0:97:91,6:91:3597:6:245:0,-6.77044,-301.348 0/1:129:117,12:117:4567:12:479:-4.62865,0,-372.176 0/0:130:126,4:126:4877:4:162:0,-24.1669,-423.913 0/0:103:100,3:100:3867:3:120:0,-19.8188,-336.887 dDocent_Contig_585 50 . C T 138.497 . AB=0.12;ABP=128.435;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1X;DP=595;DPB=595;DPRA=1.01695;EPP=44.2683;EPPR=1249.44;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.947368;PAIREDR=0.665505;PAO=0;PQA=0;PQR=0;PRO=0;QA=774;QR=22789;RO=574;RPL=19;RPP=44.2683;RPPR=1249.44;RPR=0;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=574;SRP=1249.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:84:80,4:80:3147:4:164:0,-10.1366,-268.169 0/0:116:112,3:112:4505:3:122:0,-23.6472,-394.004 0/0:86:86,0:86:3436:0:0:0,-25.8886,-309.276 0/1:100:88,12:88:3464:12:488:-14.1685,0,-281.705 0/0:108:107,0:107:4233:0:0:0,-32.2102,-380.528 0/0:101:101,0:101:4004:0:0:0,-30.404,-360.342 dDocent_Contig_586 9 . C T 111.925 . AB=0.134328;ABP=80.8268;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=531;DPB=531;DPRA=0.721983;EPP=22.5536;EPPR=1136.52;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=348;QR=20035;RO=522;RPL=0;RPP=22.5536;RPPR=1136.52;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=522;SRP=1136.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:62:62,0:62:2387:0:0:0,-18.6639,-215.038 0/0:94:94,0:94:3607:0:0:0,-28.2968,-324.751 0/0:116:116,0:116:4453:0:0:0,-34.9195,-400.827 0/0:100:100,0:100:3838:0:0:0,-30.103,-345.52 0/1:67:58,9:58:2208:9:348:-11.5113,0,-178.77 0/0:92:92,0:92:3542:0:0:0,-27.6948,-318.9 dDocent_Contig_587 16 . C A 3708.29 . AB=0.287402;ABP=202.444;AC=6;AF=0.5;AN=12;AO=146;CIGAR=1X;DP=508;DPB=508;DPRA=0;EPP=320.045;EPPR=789.083;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.890411;PAIREDR=0.941989;PAO=0;PQA=0;PQR=0;PRO=0;QA=5844;QR=14477;RO=362;RPL=0;RPP=320.045;RPPR=789.083;RPR=146;RUN=1;SAF=146;SAP=320.045;SAR=0;SRF=362;SRP=789.083;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:98:69,29:69:2777:29:1152:-74.4601,0,-220.524 0/1:118:80,38:80:3218:38:1509:-100.527,0,-254.15 0/1:55:22,33:22:886:33:1334:-103.762,0,-63.4912 0/1:91:67,24:67:2652:24:963:-59.5752,0,-211.412 0/1:64:56,8:56:2233:8:326:-10.444,0,-181.867 0/1:82:68,14:68:2711:14:560:-26.0571,0,-219.424 dDocent_Contig_588 60 . G A 43933.4 . AB=0.550274;ABP=63.0533;AC=6;AF=0.5;AN=12;AO=1505;CIGAR=1X;DP=2735;DPB=2735;DPRA=0;EPP=3271.08;EPPR=2671.75;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998007;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=58037;QR=47378;RO=1229;RPL=1505;RPP=3271.08;RPPR=2671.75;RPR=0;RUN=1;SAF=1505;SAP=3271.08;SAR=0;SRF=1229;SRP=2671.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:475:274,201:274:10500:201:7802:-558.919,0,-801.52 0/1:513:140,372:140:5442:372:14284:-1130.22,0,-335.16 0/1:274:127,147:127:4890:147:5684:-428.977,0,-357.576 0/1:588:207,381:207:7979:381:14644:-1140.11,0,-540.791 0/1:486:329,157:329:12682:157:6072:-400.044,0,-994.375 0/1:399:152,247:152:5885:247:9551:-739.056,0,-409.411 dDocent_Contig_589 21 . T G 695.266 . AB=0.124535;ABP=661.782;AC=2;AF=0.166667;AN=12;AO=162;CIGAR=1X;DP=2001;DPB=2001;DPRA=0;EPP=354.789;EPPR=3994.18;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.716049;PAIREDR=0.615343;PAO=0;PQA=0;PQR=0;PRO=0;QA=6266;QR=72230;RO=1838;RPL=0;RPP=354.789;RPPR=3994.18;RPR=162;RUN=1;SAF=162;SAP=354.789;SAR=0;SRF=1838;SRP=3994.18;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:331:303,28:303:11849:28:1081:0,-2.05565,-968.106 0/0:399:367,31:367:14447:31:1215:0,-10.5033,-1189.62 0/0:331:323,8:323:12677:8:316:0,-70.8346,-1111.31 0/0:402:374,28:374:14734:28:1079:0,-23.6094,-1227.65 0/1:303:261,42:261:10232:42:1609:-53.8377,0,-829.071 0/1:235:210,25:210:8291:25:966:-16.5025,0,-675.028 dDocent_Contig_590 7 . T A 48252.1 . AB=0.770048;ABP=1314.21;AC=4;AF=0.333333;AN=12;AO=1598;CIGAR=1X;DP=2205;DPB=2205;DPRA=8.12075;EPP=3473.02;EPPR=1314.58;GTI=0;LEN=1;MEANALT=1.6;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=60743;QR=22964;RO=604;RPL=0;RPP=3473.02;RPPR=1314.58;RPR=1598;RUN=1;SAF=1598;SAP=3473.02;SAR=0;SRF=604;SRP=1314.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:479:131,348:131:5004:348:13220:-1045.05,0,-306.192 0/1:588:129,457:129:4916:457:17338:-1383.07,0,-265.957 0/1:469:136,333:136:5157:333:12657:-997.429,0,-322.964 0/1:534:77,456:77:2931:456:17372:-1402.06,0,-103.397 0/0:53:53,0:53:2013:0:0:0,-15.9546,-181.408 0/0:82:78,4:78:2943:4:156:0,-10.2672,-250.616 dDocent_Contig_591 32 . G A 5204.28 . AB=0.162037;ABP=1931.64;AC=6;AF=0.5;AN=12;AO=315;CIGAR=1X;DP=1944;DPB=1944;DPRA=0;EPP=687.024;EPPR=3540.34;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993247;PAO=0;PQA=0;PQR=0;PRO=0;QA=12316;QR=63850;RO=1629;RPL=0;RPP=687.024;RPPR=3540.34;RPR=315;RUN=1;SAF=315;SAP=687.024;SAR=0;SRF=1629;SRP=3540.34;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:221:175,46:175:6856:46:1762:-92.285,0,-550.27 0/1:289:211,78:211:8379:78:3059:-188.415,0,-666.679 0/1:277:244,33:244:9492:33:1281:-32.1668,0,-770.372 0/1:343:282,61:282:11037:61:2408:-113.636,0,-889.413 0/1:399:361,38:361:14168:38:1475:-12.8871,0,-1154.06 0/1:415:356,59:356:13918:59:2331:-85.0347,0,-1126.79 dDocent_Contig_592 27 . G T 82.6589 . AB=0.134615;ABP=63.3104;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=736;DPB=736;DPRA=0.186567;EPP=29.068;EPPR=1575.16;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=455;QR=28722;RO=724;RPL=0;RPP=29.068;RPPR=1575.16;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=724;SRP=1575.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:52:45,7:45:1800:7:262:-8.2834,0,-146.567 0/0:83:82,1:82:3266:1:34:0,-21.5866,-290.601 0/0:43:40,3:40:1572:3:120:0,-1.75639,-130.525 0/0:22:21,1:21:850:1:39:0,-2.7261,-72.9152 0/0:308:308,0:308:12206:0:0:0,-92.7172,-1097.72 0/0:228:228,0:228:9028:0:0:0,-68.6348,-812.001 dDocent_Contig_593 49 . A G 256.945 . AB=0.100548;ABP=761.116;AC=1;AF=0.0833333;AN=12;AO=171;CIGAR=1X;DP=4103;DPB=4103;DPRA=0;EPP=365.697;EPPR=5378.13;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.998981;PAO=0;PQA=0;PQR=0;PRO=0;QA=6437;QR=153155;RO=3925;RPL=1;RPP=365.697;RPPR=5378.13;RPR=170;RUN=1;SAF=171;SAP=374.332;SAR=0;SRF=3925;SRP=8526.04;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:600:597,2:597:23093:2:75:0,-173.596,-2069.5 0/0:768:729,37:729:28631:37:1437:0,-101.116,-2444.85 0/1:547:490,55:490:19147:55:2113:-26.0133,0,-1557.44 0/0:670:666,3:666:25713:3:28:0,-199.039,-2309.46 0/0:669:639,29:639:25082:29:1083:0,-103.426,-2157.58 0/0:849:804,45:804:31489:45:1701:0,-102.264,-2678.01 dDocent_Contig_594 13 . C T 1272.46 . AB=0.163022;ABP=499.129;AC=1;AF=0.0833333;AN=12;AO=158;CIGAR=1X;DP=2300;DPB=2300;DPRA=0.8;EPP=346.103;EPPR=4652.13;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=59.9766;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.993671;PAIREDR=0.999533;PAO=0;PQA=0;PQR=0;PRO=0;QA=5960;QR=85086;RO=2141;RPL=0;RPP=346.103;RPPR=4652.13;RPR=158;RUN=1;SAF=158;SAP=346.103;SAR=0;SRF=2141;SRP=4652.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:277:266,10:266:10484:10:384:0,-48.3027,-907.999 0/0:460:460,0:460:18344:0:0:0,-138.474,-1648.76 0/0:201:199,2:199:7933:2:78:0,-53.1036,-706.148 0/0:409:383,26:383:15270:26:985:0,-34.1604,-1284.12 0/1:503:421,82:421:16705:82:3098:-127.565,0,-1350.73 0/0:450:412,38:412:16350:38:1415:0,-7.83622,-1342.57 dDocent_Contig_595 98 . N A 329.432 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=14;CIGAR=1X;DP=14;DPB=14;DPRA=0;EPP=33.4109;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=349;QR=0;RO=0;RPL=14;RPP=33.4109;RPPR=0;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:8:0,8:0:0:8:245:-22.3487,-2.40824,0 1/1:3:0,3:0:0:3:43:-4.0132,-0.90309,0 1/1:2:0,2:0:0:2:27:-2.56496,-0.60206,0 dDocent_Contig_596 141 . C T 863.779 . AB=0.224215;ABP=150.33;AC=4;AF=0.333333;AN=12;AO=53;CIGAR=1X;DP=287;DPB=287;DPRA=5.54;EPP=118.098;EPPR=511.135;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.987179;PAO=0;PQA=0;PQR=0;PRO=0;QA=1818;QR=8191;RO=234;RPL=0;RPP=118.098;RPPR=511.135;RPR=53;RUN=1;SAF=0;SAP=118.098;SAR=53;SRF=0;SRP=511.135;SRR=234;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:70:56,14:56:1943:14:501:-24.3535,0,-154.056 0/1:102:82,20:82:2888:20:682:-30.9855,0,-229.435 0/1:24:16,8:16:570:8:286:-18.8598,0,-44.4039 0/1:27:19,8:19:636:8:249:-14.5845,0,-49.4192 0/0:10:10,0:10:351:0:0:0,-3.0103,-31.9263 0/0:54:51,3:51:1803:3:100:0,-6.9265,-153.212 dDocent_Contig_597 35 . C T 196.701 . AB=0.130435;ABP=139.435;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=774;DPB=774;DPRA=0.720562;EPP=39.9253;EPPR=1646.81;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.998679;PAO=0;PQA=0;PQR=0;PRO=0;QA=677;QR=30164;RO=757;RPL=0;RPP=39.9253;RPPR=1646.81;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=757;SRP=1646.81;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:90:88,2:88:3537:2:74:0,-20.0678,-311.334 0/1:115:100,15:100:3974:15:603:-19.9888,0,-323.027 0/0:103:103,0:103:4153:0:0:0,-31.0061,-373.725 0/0:153:153,0:153:6091:0:0:0,-46.0576,-547.959 0/0:128:128,0:128:5097:0:0:0,-38.5318,-458.597 0/0:185:185,0:185:7312:0:0:0,-55.6905,-657.705 dDocent_Contig_601 32 . C T 844.712 . AB=0.296;ABP=48.1943;AC=5;AF=0.416667;AN=12;AO=37;CIGAR=1X;DP=142;DPB=142;DPRA=1.47059;EPP=83.3548;EPPR=228.843;GTI=0;LEN=1;MEANALT=1;MQM=41.3514;MQMR=35.4519;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1459;QR=4089;RO=104;RPL=0;RPP=83.3548;RPPR=228.843;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=104;SRP=228.843;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:13,8:13:498:8:318:-20.8826,0,-25.1399 0/1:55:40,15:40:1568:15:600:-34.3264,0,-90.5784 0/1:16:13,3:13:501:3:118:-5.553,0,-33.0792 0/1:16:8,8:8:319:8:302:-21.2683,0,-21.5192 0/1:17:14,3:14:558:3:121:-5.6421,0,-41.1409 0/0:17:16,0:16:645:0:0:0,-4.81648,-48.1494 dDocent_Contig_620 98 . N T 3615.46 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=118;CIGAR=2X;DP=119;DPB=128;DPRA=0;EPP=259.244;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=57.6949;MQMR=0;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.991525;PAIREDR=0;PAO=18;PQA=209;PQR=0;PRO=0;QA=4003;QR=0;RO=0;RPL=118;RPP=259.244;RPPR=0;RPR=0;RUN=1;SAF=118;SAP=259.244;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:22:0,22:0:0:22:735:-66.1821,-6.62266,0 1|1:33:0,32:0:0:32:1075:-96.3869,-9.63296,0 1|1:18:0,18:0:0:18:626:-56.639,-5.41854,0 1|1:35:0,35:0:0:35:1190:-107.259,-10.5361,0 1|1:6:0,6:0:0:6:207:-18.7457,-1.80618,0 1|1:5:0,5:0:0:5:170:-15.4876,-1.50515,0 dDocent_Contig_624 23 . G T 5571.91 . AB=0.305085;ABP=236.646;AC=2;AF=0.166667;AN=12;AO=216;CIGAR=1X;DP=1926;DPB=1926;DPRA=1.16256;EPP=472.048;EPPR=3714.06;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99883;PAO=0;PQA=0;PQR=0;PRO=0;QA=8569;QR=67305;RO=1709;RPL=0;RPP=472.048;RPPR=3714.06;RPR=216;RUN=1;SAF=216;SAP=472.048;SAR=0;SRF=1709;SRP=3714.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:289:288,0:288:11348:0:0:0,-86.6966,-1020.32 0/0:344:344,0:344:13552:0:0:0,-103.554,-1218.72 0/0:245:245,0:245:9651:0:0:0,-73.7523,-868.003 0/0:340:340,0:340:13375:0:0:0,-102.35,-1202.79 0/1:349:253,96:253:9996:96:3820:-238.743,0,-793.96 0/1:359:239,120:239:9383:120:4749:-319.262,0,-735.873 dDocent_Contig_625 11 . T A 71300.7 . AB=0.0630809;ABP=8388.13;AC=0;AF=0;AN=12;AO=319;CIGAR=2X;DP=5057;DPB=5057;DPRA=0;EPP=695.71;EPPR=3772.69;GTI=0;LEN=1;MEANALT=3.66667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=12684;QR=67578;RO=1736;RPL=0;RPP=695.71;RPPR=3772.69;RPR=319;RUN=1;SAF=319;SAP=695.71;SAR=0;SRF=1736;SRP=3772.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:684:130,23,251,280:130:5067:23,251,280:919,9815,11174:-1271.5,-1234.94,-1644.48,-503.744,-844.51,-844.646,-390.432,-731.2,0,-722.606 0|0:1003:219,74,238,472:219:8523:74,238,472:2940,9367,19000:-1570.02,-1393.92,-2072.06,-865.457,-1323.84,-1494.22,-70.0882,-528.47,0,-628.41 0|0:655:132,26,185,311:132:5102:26,185,311:1026,7323,12462:-1170.55,-1125.87,-1537.06,-607.619,-942.217,-970.942,-183.661,-518.259,0,-509.055 0|0:795:183,51,184,376:183:7125:51,184,376:2029,7219,15154:-1202.04,-1090.08,-1660.27,-663.492,-1081.99,-1193.65,-8.08885,-426.59,0,-480.45 0|0:905:630,29,9,236:630:24588:29,9,236:1156,355,9439:-587.837,-682.295,-2694.72,-748.278,-2674.25,-2766.73,0,-1925.97,-1991.95,-1950.12 0|0:1015:442,116,16,440:442:17173:116,16,440:4614,643,17773:-1332.11,-1085.3,-2461.41,-1412.18,-2443.35,-2818.4,0,-1031.16,-1358.05,-1278.58 dDocent_Contig_626 9 . C T 366.687 . AB=0.190909;ABP=94.2911;AC=3;AF=0.25;AN=12;AO=24;CIGAR=1X;DP=268;DPB=268;DPRA=0.811321;EPP=55.1256;EPPR=532.85;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.971311;PAO=0;PQA=0;PQR=0;PRO=0;QA=891;QR=9423;RO=244;RPL=0;RPP=55.1256;RPPR=532.85;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=244;SRP=532.85;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:47:45,2:45:1738:2:71:0,-7.40683,-149.933 0/1:37:24,13:24:930:13:492:-33.4828,0,-72.8783 0/1:32:28,4:28:1075:4:146:-3.86276,0,-87.4224 0/1:41:37,4:37:1419:4:143:-0.876187,0,-115.647 0/0:58:57,1:57:2209:1:39:0,-13.5632,-195.133 0/0:53:53,0:53:2052:0:0:0,-15.9546,-184.911 dDocent_Contig_627 74 . C T 273.722 . AB=0.105749;ABP=1317.99;AC=2;AF=0.166667;AN=12;AO=258;CIGAR=1X;DP=3231;DPB=3231;DPRA=0;EPP=563.25;EPPR=6298.35;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.996124;PAIREDR=0.987053;PAO=0;PQA=0;PQR=0;PRO=0;QA=8894;QR=99479;RO=2935;RPL=258;RPP=563.25;RPPR=6376.28;RPR=0;RUN=1;SAF=258;SAP=563.25;SAR=0;SRF=2926;SRP=6298.35;SRR=9;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:443:388,46:388:13222:46:1554:-9.16816,0,-1058.92 0/0:603:559,35:559:18860:35:1207:0,-70.2317,-1588.21 0/0:499:471,23:471:15969:23:803:0,-76.4249,-1364.46 0/0:587:534,44:534:18153:44:1537:0,-35.7175,-1494.91 0/1:531:472,57:472:15974:57:1980:-19.0177,0,-1278.03 0/0:568:511,53:511:17301:53:1813:0,-6.66561,-1393.42 dDocent_Contig_628 14 . C T 1842.67 . AB=0.235294;ABP=209.939;AC=4;AF=0.333333;AN=12;AO=88;CIGAR=1X;DP=478;DPB=478;DPRA=0;EPP=194.1;EPPR=849.885;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.875;PAIREDR=0.823077;PAO=0;PQA=0;PQR=0;PRO=0;QA=3512;QR=15572;RO=390;RPL=0;RPP=194.1;RPPR=849.885;RPR=88;RUN=1;SAF=88;SAP=194.1;SAR=0;SRF=390;SRP=849.885;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:68:65,3:65:2579:3:117:0,-9.56075,-221.34 0/0:70:65,5:65:2556:5:198:0,-2.87563,-211.971 0/1:68:62,6:62:2484:6:235:-1.04633,0,-203.223 0/1:113:82,31:82:3318:31:1247:-78.4816,0,-264.639 0/1:82:58,24:58:2334:24:952:-61.2952,0,-185.526 0/1:77:58,19:58:2301:19:763:-45.8104,0,-184.064 dDocent_Contig_629 12 . C A 2350.32 . AB=0.115603;ABP=2034.69;AC=3;AF=0.25;AN=12;AO=183;CIGAR=2X;DP=2575;DPB=2575;DPRA=0.797883;EPP=400.39;EPPR=4938.77;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.99604;PAO=0;PQA=0;PQR=0;PRO=0;QA=7254;QR=90673;RO=2273;RPL=0;RPP=400.39;RPPR=4938.77;RPR=183;RUN=1;SAF=183;SAP=400.39;SAR=0;SRF=2273;SRP=4938.77;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:351:275,71,5:275:10943:71,5:2803,203:-147.827,0,-879.59,-213.867,-884.221,-1113.34 0|0:461:376,39,46:376:15014:39,46:1540,1853:-39.5395,-26.0186,-1250.79,0,-1109.81,-1222.68 0|1:301:250,28,23:250:9990:28,23:1109,929:-16.0137,0,-814.374,-14.6827,-746.218,-830.569 0|1:470:380,45,43:380:15120:45,43:1802,1725:-34.0573,0,-1231.32,-6.32461,-1102.74,-1238.25 0|0:538:538,0,0:538:21529:0,0:0,0:0,-161.954,-1935.78,-161.954,-1935.78,-1935.78 0|0:454:454,0,0:454:18077:0,0:0,0:0,-136.668,-1625.46,-136.668,-1625.46,-1625.46 dDocent_Contig_630 68 . C A 57.5735 . AB=0.123288;ABP=92.9925;AC=1;AF=0.0833333;AN=12;AO=21;CIGAR=1X;DP=387;DPB=387;DPRA=0;EPP=48.6112;EPPR=795.598;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.571429;PAIREDR=0.419178;PAO=0;PQA=0;PQR=0;PRO=0;QA=732;QR=12756;RO=365;RPL=11;RPP=3.1137;RPPR=128.093;RPR=10;RUN=1;SAF=11;SAP=3.1137;SAR=10;SRF=255;SRP=128.093;SRR=110;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:53,1:53:1857:1:37:0,-12.5578,-163.713 0/0:74:70,4:70:2414:4:136:0,-9.701,-204.943 0/1:73:64,9:64:2245:9:308:-6.07611,0,-180.34 0/0:67:63,4:63:2232:4:142:0,-7.0398,-188.018 0/0:44:42,2:42:1472:2:73:0,-6.31402,-125.844 0/0:75:73,1:73:2536:1:36:0,-18.9579,-224.974 dDocent_Contig_631 116 . G C 4223.98 . AB=0.181766;ABP=1546.78;AC=4;AF=0.333333;AN=12;AO=321;CIGAR=1X;DP=2347;DPB=2347;DPRA=1.54498;EPP=700.053;EPPR=4398.07;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10645;QR=68718;RO=2024;RPL=0;RPP=700.053;RPPR=4398.07;RPR=321;RUN=1;SAF=0;SAP=700.053;SAR=321;SRF=0;SRP=4398.07;SRR=2024;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:320:245,75:245:8369:75:2481:-127.219,0,-656.95 0/1:547:432,115:432:14605:115:3816:-178.989,0,-1149.66 0/1:477:422,55:422:14343:55:1813:-19.8537,0,-1147.15 0/1:411:337,74:337:11372:74:2469:-98.7425,0,-899.726 0/0:269:268,0:268:9098:0:0:0,-80.676,-818.516 0/0:323:320,2:320:10931:2:66:0,-90.9066,-977.547 dDocent_Contig_632 55 . T C 73.0071 . AB=0.104762;ABP=145.48;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=554;DPB=554;DPRA=1.12994;EPP=35.5824;EPPR=1171.26;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.877323;PAO=0;PQA=0;PQR=0;PRO=0;QA=594;QR=18920;RO=538;RPL=15;RPP=35.5824;RPPR=1171.26;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=538;SRP=1171.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:76:76,0:76:2608:0:0:0,-22.8783,-234.942 0/0:119:119,0:119:4086:0:0:0,-35.8226,-367.885 0/0:76:76,0:76:2670:0:0:0,-22.8783,-240.519 0/0:83:82,0:82:2948:0:0:0,-24.6845,-265.453 0/0:95:91,4:91:3197:4:162:0,-13.6309,-272.962 0/1:105:94,11:94:3411:11:432:-7.61947,0,-275.558 dDocent_Contig_633 98 . N G 4441.2 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=151;CIGAR=1X;DP=151;DPB=151;DPRA=0;EPP=330.903;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=5.42101e-20;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4905;QR=0;RO=0;RPL=151;RPP=330.903;RPPR=0;RPR=0;RUN=1;SAF=151;SAP=330.903;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:21:0,21:0:0:21:642:-58.0724,-6.32163,0 1/1:34:0,34:0:0:34:1085:-97.9395,-10.235,0 1/1:7:0,7:0:0:7:240:-21.9349,-2.10721,0 1/1:29:0,29:0:0:29:959:-86.6149,-8.72987,0 1/1:28:0,28:0:0:28:943:-85.1786,-8.42884,0 1/1:32:0,32:0:0:32:1036:-93.5342,-9.63296,0 dDocent_Contig_634 69 . A G 223.437 . AB=0.225352;ABP=49.5287;AC=1;AF=0.0833333;AN=12;AO=22;CIGAR=1X;DP=215;DPB=215;DPRA=2.07143;EPP=50.7827;EPPR=422.104;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=688;QR=6162;RO=193;RPL=22;RPP=50.7827;RPPR=422.104;RPR=0;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=193;SRP=422.104;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:585:0:0:0,-5.41854,-52.9602 0/0:42:39,3:39:1259:3:103:0,-3.03324,-103.991 0/1:71:55,16:55:1758:16:486:-22.6578,0,-137.122 0/0:32:29,3:29:870:3:99:0,-0.395502,-69.3414 0/0:28:28,0:28:944:0:0:0,-8.42884,-85.2702 0/0:24:24,0:24:746:0:0:0,-7.22472,-67.4316 dDocent_Contig_635 21 . A T 2777.67 . AB=0.296399;ABP=132.992;AC=2;AF=0.166667;AN=12;AO=116;CIGAR=1X;DP=1084;DPB=1084;DPRA=1.07558;EPP=254.901;EPPR=2100.65;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4662;QR=38497;RO=966;RPL=0;RPP=254.901;RPPR=2100.65;RPR=116;RUN=1;SAF=116;SAP=254.901;SAR=0;SRF=966;SRP=2100.65;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:136:134,2:134:5299:2:81:0,-33.2543,-469.083 0/0:243:235,7:235:9414:7:282:0,-47.5052,-820.908 0/0:195:195,0:195:7820:0:0:0,-58.7008,-703.377 0/0:149:148,0:148:5864:0:0:0,-44.5524,-527.178 0/1:187:127,60:127:5007:60:2429:-162.454,0,-394.226 0/1:174:127,47:127:5093:47:1870:-116.126,0,-405.854 dDocent_Contig_636 61 . T C 282.115 . AB=0.134021;ABP=228.709;AC=2;AF=0.166667;AN=12;AO=47;CIGAR=1X;DP=1228;DPB=1228;DPRA=0.535329;EPP=105.07;EPPR=2567.52;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999153;PAO=0;PQA=0;PQR=0;PRO=0;QA=1689;QR=43282;RO=1181;RPL=47;RPP=105.07;RPPR=2567.52;RPR=0;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=1181;SRP=2567.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:87:75,12:75:2647:12:414:-11.3919,0,-212.246 0/0:141:131,10:131:4708:10:349:0,-10.7095,-392.097 0/1:107:93,14:93:3538:14:550:-17.6332,0,-286.333 0/0:197:188,9:188:6807:9:294:0,-32.5373,-585.791 0/0:334:334,0:334:12328:0:0:0,-100.544,-1109.07 0/0:362:360,2:360:13254:2:82:0,-101.193,-1184.57 dDocent_Contig_637 121 . A T 4028.8 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=39;CIGAR=1X3M3D2M1X;DP=3127;DPB=3023.1;DPRA=0.880357;EPP=87.6977;EPPR=5974.56;GTI=0;LEN=1;MEANALT=7;MQM=60;MQMR=59.9978;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.999273;PAO=0;PQA=0;PQR=0;PRO=0;QA=1441;QR=101032;RO=2750;RPL=0;RPP=87.6977;RPPR=5974.56;RPR=39;RUN=1;SAF=0;SAP=87.6977;SAR=39;SRF=0;SRP=5974.56;SRR=2750;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:558:440,0,107:440:16146:0,107:0,4009:-195.975,-328.429,-1648.22,0,-1319.88,-1287.67 0|0:585:477,0,106:477:17654:0,106:0,4012:-185.608,-329.199,-1773.42,0,-1444.51,-1412.6 0|0:371:329,0,39:329:12122:0,39:0,1486:-22.9066,-121.946,-1113.17,0,-991.272,-979.531 0|0:493:419,39,30:419:15530:39,30:1441,1125:0,-8.25015,-1267.2,-33.9741,-1186.79,-1295.63 0|0:648:620,0,23:620:22685:0,23:0,857:0,-186.639,-2040.47,-116.291,-1970.32,-1963.39 0|0:472:465,0,0:465:16895:0,0:0,0:0,-139.979,-1519.81,-139.979,-1519.81,-1519.81 dDocent_Contig_638 17 . C T 78.7548 . AB=0.127273;ABP=69.3784;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=351;DPB=351;DPRA=1.07895;EPP=24.725;EPPR=743.482;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.9;PAIREDR=0.950147;PAO=0;PQA=0;PQR=0;PRO=0;QA=391;QR=13723;RO=341;RPL=0;RPP=24.725;RPPR=743.482;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=341;SRP=743.482;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:56:56,0:56:2271:0:0:0,-16.8577,-204.542 0/0:77:77,0:77:3098:0:0:0,-23.1793,-278.89 0/0:44:44,0:44:1780:0:0:0,-13.2453,-160.41 0/0:51:51,0:51:2064:0:0:0,-15.3525,-185.936 0/1:55:48,7:48:1911:7:271:-8.19423,0,-155.637 0/0:68:65,3:65:2599:3:120:0,-9.28235,-222.846 dDocent_Contig_639 10 . C A 2744.44 . AB=0.241803;ABP=285.586;AC=4;AF=0.333333;AN=12;AO=118;CIGAR=1X;DP=1011;DPB=1011;DPRA=0.466539;EPP=259.244;EPPR=1942.14;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99888;PAO=0;PQA=0;PQR=0;PRO=0;QA=4696;QR=35875;RO=893;RPL=0;RPP=259.244;RPPR=1942.14;RPR=118;RUN=1;SAF=118;SAP=259.244;SAR=0;SRF=893;SRP=1942.14;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:117:78,39:78:3122:39:1561:-105.505,0,-245.826 0/1:160:117,43:117:4685:43:1717:-106.59,0,-373.38 0/1:90:73,17:73:2953:17:676:-34.0763,0,-238.757 0/1:121:102,19:102:4119:19:742:-30.6778,0,-334.241 0/0:232:232,0:232:9294:0:0:0,-69.839,-835.876 0/0:291:291,0:291:11702:0:0:0,-87.5997,-1052.31 dDocent_Contig_640 21 . C T 200.838 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=12;CIGAR=2X1M1X2M1X;DP=651;DPB=651;DPRA=1.64356;EPP=29.068;EPPR=1269.11;GTI=0;LEN=1;MEANALT=1;MQM=12;MQMR=59.8756;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.994958;PAO=0;PQA=0;PQR=0;PRO=0;QA=455;QR=23242;RO=595;RPL=0;RPP=29.068;RPPR=1295.04;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=592;SRP=1269.11;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:74:73,0,1,0:73:2853:0,1,0:0,40,0:0,-21.9752,-256.848,-21.6763,-256.614,-256.313,-21.9752,-256.848,-256.614,-256.848 0|0:141:137,0,3,0:137:5360:0,3,0:0,119,0:0,-41.2411,-481.929,-31.4475,-472.133,-471.229,-41.2411,-481.929,-472.133,-481.929 0|0:75:65,9,1,0:65:2559:9,1,0:355,40,0:-2.39719,0,-207.795,-18.6597,-207.209,-228.946,-21.9641,-210.504,-229.247,-232.542 0|0:107:79,17,6,0:79:3068:17,6,0:661,233,0:-18.4984,0,-246.983,-23.1209,-232.957,-273.45,-42.2797,-252.1,-275.257,-294.401 0|0:166:154,0,0,12:154:6027:0,0,12:0,0,455:0,-46.3586,-542.146,-46.3586,-542.146,-542.146,-36.9141,-532.841,-532.841,-529.228 0|0:88:87,0,0,0:87:3375:0,0,0:0,0,0:0,-26.1896,-300.411,-26.1896,-300.411,-300.411,-26.1896,-300.411,-300.411,-300.411 dDocent_Contig_641 89 . G C 103.592 . AB=0.028169;ABP=140.302;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=1X2M2I5M;DP=319;DPB=342.625;DPRA=3.08696;EPP=7.35324;EPPR=163.699;GTI=0;LEN=1;MEANALT=9;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=1;PAO=4;PQA=135;PQR=395;PRO=14.1667;QA=79;QR=2373;RO=74;RPL=2;RPP=7.35324;RPPR=163.699;RPR=0;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=74;SRP=163.699;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:43:9,0,2,0:9:285:0,2,0:0,69,0:-2.89666,-5.60593,-28.5359,0,-22.9298,-22.3278,-5.60593,-28.5359,-22.9298,-28.5359 0|0:76:17,0,0,2:17:554:0,0,2:0,0,74:-0.937557,-6.05507,-50.7815,-6.05507,-50.7815,-50.7815,0,-44.7266,-44.7266,-44.1245 0|0:51:14,0,2,0:14:438:0,2,0:0,73,0:-1.75155,-5.96597,-41.1555,0,-35.1897,-34.5876,-5.96597,-41.1555,-35.1897,-41.1555 0|1:71:17,2,2,0:17:546:2,2,0:79,74,0:-1.38521,0,-43.4023,-0.447881,-37.9495,-43.8499,-6.50272,-44.0044,-44.452,-50.5068 0|0:23:9,0,0,0:9:292:0,0,0:0,0,0:0,-2.70927,-26.2682,-2.70927,-26.2682,-26.2682,-2.70927,-26.2682,-26.2682,-26.2682 0|0:55:8,0,3,0:8:258:0,3,0:0,109,0:-6.49513,-8.90337,-29.7072,0,-20.8039,-19.9009,-8.90337,-29.7072,-20.8039,-29.7072 dDocent_Contig_644 171 . C T 62.8542 . AB=0.0915493;ABP=414.55;AC=1;AF=0.0833333;AN=12;AO=27;CIGAR=1X;DP=800;DPB=800;DPRA=3.81818;EPP=61.6401;EPPR=1681.56;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1029;QR=30525;RO=773;RPL=27;RPP=61.6401;RPPR=1681.56;RPR=0;RUN=1;SAF=0;SAP=61.6401;SAR=27;SRF=0;SRP=1681.56;SRR=773;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:38,0:38:1523:0:0:0,-11.4391,-137.308 0/0:83:83,0:83:3241:0:0:0,-24.9855,-291.747 0/0:81:81,0:81:3259:0:0:0,-24.3834,-293.363 0/0:73:73,0:73:2903:0:0:0,-21.9752,-261.367 0/1:284:258,26:258:10224:26:1020:-6.60418,0,-834.03 0/0:241:240,1:240:9375:1:9:0,-71.6482,-842.295 dDocent_Contig_645 60 . T C 122.932 . AB=0.0953895;ABP=897.426;AC=1;AF=0.0833333;AN=12;AO=124;CIGAR=1X;DP=3208;DPB=3208;DPRA=0.987941;EPP=272.273;EPPR=6697.66;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993837;PAO=0;PQA=0;PQR=0;PRO=0;QA=4590;QR=113694;RO=3083;RPL=124;RPP=272.273;RPPR=6697.66;RPR=0;RUN=1;SAF=124;SAP=272.273;SAR=0;SRF=3083;SRP=6697.66;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:463:422,41:422:15617:41:1528:0,-1.58144,-1267.1 0/0:536:525,11:525:19279:11:403:0,-124.74,-1697.66 0/0:502:490,12:490:18416:12:420:0,-112.997,-1618.27 0/0:552:552,0:552:20166:0:0:0,-166.169,-1814.05 0/0:526:526,0:526:19258:0:0:0,-158.342,-1732.38 0/1:629:568,60:568:20958:60:2239:-12.6117,0,-1696.14 dDocent_Contig_646 10 . C T 40.0722 . AB=0.0961538;ABP=150.336;AC=1;AF=0.0833333;AN=12;AO=49;CIGAR=1X;DP=830;DPB=830;DPRA=0;EPP=109.412;EPPR=1696.76;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998718;PAO=0;PQA=0;PQR=0;PRO=0;QA=1953;QR=31210;RO=780;RPL=0;RPP=109.412;RPPR=1696.76;RPR=49;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=780;SRP=1696.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:100:94,6:94:3736:6:245:0,-7.67353,-313.819 0/1:104:94,10:94:3789:10:392:-4.32594,0,-309.696 0/0:189:175,14:175:7026:14:558:0,-6.3363,-581.439 0/0:112:106,5:106:4198:5:202:0,-15.2448,-359.21 0/0:161:156,5:156:6262:5:193:0,-30.7283,-545.577 0/0:164:155,9:155:6199:9:363:0,-16.3346,-524.622 dDocent_Contig_647 25 . A G 52.9205 . AB=0.106061;ABP=91.9749;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=778;DPB=778;DPRA=1.30861;EPP=24.725;EPPR=1668.53;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=401;QR=30501;RO=767;RPL=0;RPP=24.725;RPPR=1668.53;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=767;SRP=1668.53;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:59,0:59:2358:0:0:0,-17.7608,-212.374 0/0:151:149,2:149:5920:2:81:0,-37.7698,-524.91 0/0:106:106,0:106:4237:0:0:0,-31.9092,-381.28 0/1:66:59,7:59:2316:7:279:-5.61081,0,-188.727 0/0:224:222,1:222:8815:1:41:0,-63.4396,-788.75 0/0:172:172,0:172:6855:0:0:0,-51.7772,-616.638 dDocent_Contig_648 14 . G A 304.55 . AB=0.205479;ABP=58.011;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=6M1X;DP=411;DPB=409.143;DPRA=2.30366;EPP=57.2971;EPPR=812.97;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=949;QR=14520;RO=373;RPL=0;RPP=57.2971;RPPR=812.97;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=373;SRP=812.97;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:73:54,4,15:54:2096:4,15:155,570:-30.4727,-33.9925,-205.005,0,-159.476,-167.695 0|0:69:69,0,0:69:2668:0,0:0,0:0,-20.7711,-240.292,-20.7711,-240.292,-240.292 0|0:147:129,8,10:129:5019:8,10:300,379:0,-14.2647,-424.321,-7.76683,-395.666,-417.225 0|0:69:68,1,0:68:2683:1,0:39,0:0,-16.8745,-237.727,-20.47,-238.028,-241.234 0|0:10:10,0,0:10:389:0,0:0,0:0,-3.0103,-35.367,-3.0103,-35.367,-35.367 0|0:43:43,0,0:43:1665:0,0:0,0:0,-12.9443,-150.101,-12.9443,-150.101,-150.101 dDocent_Contig_649 39 . A T 6631.2 . AB=0.0349345;ABP=863.425;AC=0;AF=0;AN=12;AO=16;CIGAR=1M1D2M2D1M1X1M1X10M;DP=672;DPB=557.55;DPRA=0;EPP=37.7539;EPPR=606.68;GTI=0;LEN=1;MEANALT=5.25;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=622;QR=10826;RO=278;RPL=0;RPP=37.7539;RPPR=606.68;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=278;SRP=606.68;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:116:33,3,50,27:33:1281:3,50,27:121,1856,1080:-141.911,-141.87,-246.221,0,-95.2754,-90.1987,-62.8784,-158.162,-16.2868,-160.009 0|0:168:45,7,76,37:45:1719:7,76,37:274,2850,1456:-219.863,-210.879,-349.799,0,-118.493,-118.145,-113.649,-232.147,-21.2633,-243.54 0|0:73:27,5,26,15:27:1052:5,26,15:193,991,611:-73.141,-65.4217,-150.378,0,-70.6079,-78.6277,-30.856,-101.473,-36.0441,-112.806 0|0:101:16,1,66,15:16:630:1,66,15:34,2422,598:-193.11,-195.169,-246.699,0,-49.0776,-31.9663,-148.676,-197.751,-2.58048,-195.994 0|0:102:79,0,12,8:79:3098:0,12,8:0,417,315:-10.1035,-33.8849,-288.678,0,-254.787,-251.175,-7.95461,-262.766,-228.875,-260.358 0|0:112:78,0,15,16:78:3046:0,15,16:0,558,637:-28.9893,-52.4697,-302.876,-6.81083,-257.218,-252.703,0,-250.426,-204.769,-245.61 dDocent_Contig_650 35 . T C 981.229 . AB=0.238636;ABP=107.438;AC=2;AF=0.166667;AN=12;AO=52;CIGAR=1X;DP=408;DPB=408;DPRA=1.69355;EPP=115.927;EPPR=773.883;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2086;QR=14216;RO=355;RPL=0;RPP=115.927;RPPR=773.883;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=355;SRP=773.883;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:45:15,30:15:601:30:1203:-94.9989,0,-40.8823 0/0:54:50,4:50:2000:4:164:0,-1.10572,-165.038 0/0:21:20,0:20:800:0:0:0,-6.0206,-72.0394 0/0:85:79,6:79:3164:6:241:0,-3.52125,-262.764 0/1:131:119,12:119:4748:12:478:-3.93656,0,-387.791 0/0:72:72,0:72:2903:0:0:0,-21.6742,-261.358 dDocent_Contig_651 98 . N T 141.764 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=147;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:112:-10.3576,-1.20412,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_652 85 . C G 33.839 . AB=0.285714;ABP=5.80219;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=1X;DP=154;DPB=154;DPRA=0.238095;EPP=7.35324;EPPR=330.903;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.993377;PAO=0;PQA=0;PQR=0;PRO=0;QA=58;QR=5134;RO=151;RPL=2;RPP=7.35324;RPPR=330.903;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=151;SRP=330.903;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:7:5,2:5:170:2:58:-3.40141,0,-13.5276 0/0:43:43,0:43:1493:0:0:0,-12.9443,-134.667 0/0:28:27,0:27:912:0:0:0,-8.12781,-82.2508 0/0:24:24,0:24:818:0:0:0,-7.22472,-73.9359 0/0:8:8,0:8:279:0:0:0,-2.40824,-25.449 0/0:44:44,0:44:1462:0:0:0,-13.2453,-131.867 dDocent_Contig_653 31 . G A 157.404 . AB=0.1125;ABP=211.689;AC=1;AF=0.0833333;AN=12;AO=33;CIGAR=1X;DP=987;DPB=987;DPRA=0;EPP=74.6689;EPPR=2074.59;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993711;PAO=0;PQA=0;PQR=0;PRO=0;QA=1297;QR=37912;RO=954;RPL=0;RPP=74.6689;RPPR=2074.59;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=954;SRP=2074.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:136:132,4:132:5235:4:162:0,-25.9731,-456.038 0/0:143:142,1:142:5650:1:41:0,-38.9527,-504.218 0/0:117:112,5:112:4438:5:204:0,-16.4765,-380.613 0/1:160:142,18:142:5662:18:710:-16.0591,0,-461.212 0/0:270:266,4:266:10557:4:154:0,-67.0487,-935.234 0/0:161:160,1:160:6370:1:26:0,-45.866,-570.437 dDocent_Contig_654 56 . A C 121.446 . AB=0.130952;ABP=102.381;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=288;DPB=288;DPRA=0.823529;EPP=26.8965;EPPR=600.165;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.367273;PAO=0;PQA=0;PQR=0;PRO=0;QA=417;QR=10846;RO=275;RPL=11;RPP=26.8965;RPPR=600.165;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=275;SRP=600.165;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:37,5:37:1455:5:179:-3.80887,0,-118.559 0/0:67:65,0:65:2545:0:0:0,-19.5669,-228.957 0/1:42:36,6:36:1424:6:238:-9.14929,0,-115.767 0/0:47:47,0:47:1835:0:0:0,-14.1484,-165.363 0/0:40:40,0:40:1610:0:0:0,-12.0412,-145.13 0/0:50:50,0:50:1977:0:0:0,-15.0515,-178.132 dDocent_Contig_655 10 . C A 3448.42 . AB=0.14038;ABP=2011.5;AC=3;AF=0.25;AN=12;AO=282;CIGAR=1X;DP=4467;DPB=4467;DPRA=0.601331;EPP=615.366;EPPR=9084.11;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=59.9993;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.999044;PAO=0;PQA=0;PQR=0;PRO=0;QA=11042;QR=165150;RO=4182;RPL=0;RPP=615.366;RPPR=9084.11;RPR=282;RUN=1;SAF=282;SAP=615.366;SAR=0;SRF=4182;SRP=9084.11;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:603:536,65:536:21040:65:2530:-46.5394,0,-1710.65 0/1:727:598,129:598:23569:129:5038:-234.48,0,-1900.44 0/1:458:401,57:401:15804:57:2257:-65.4317,0,-1283.31 0/0:651:620,31:620:24479:31:1217:0,-86.1648,-2091.28 0/0:951:950,0:950:37708:0:0:0,-285.978,-3389.92 0/0:1077:1077,0:1077:42550:0:0:0,-324.209,-3825.69 dDocent_Contig_656 30 . A C 81.9058 . AB=0.147059;ABP=39.7976;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=197;DPB=197;DPRA=1.1413;EPP=22.5536;EPPR=411.247;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.777778;PAIREDR=0.723404;PAO=0;PQA=0;PQR=0;PRO=0;QA=366;QR=7515;RO=188;RPL=0;RPP=22.5536;RPPR=411.247;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=188;SRP=411.247;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:922:0:0:0,-6.92369,-83.285 0/0:40:40,0:40:1598:0:0:0,-12.0412,-144.053 0/1:34:29,5:29:1161:5:204:-8.50901,0,-94.534 0/0:40:38,2:38:1510:2:80:0,-4.44962,-128.55 0/0:29:29,0:29:1158:0:0:0,-8.72987,-104.502 0/0:31:29,2:29:1166:2:82:0,-1.55225,-97.4398 dDocent_Contig_657 105 . G A 30.0103 . AB=0.102564;ABP=56.5176;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=146;DPB=146;DPRA=1.05634;EPP=16.0391;EPPR=307.016;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.7;PAO=0;PQA=0;PQR=0;PRO=0;QA=223;QR=5577;RO=140;RPL=6;RPP=16.0391;RPPR=307.016;RPR=0;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=307.016;SRR=140;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:16,1:16:620:1:41:0,-1.02294,-52.0272 0/1:39:35,4:35:1392:4:163:-3.31826,0,-113.786 0/0:19:18,1:18:737:1:19:0,-3.8196,-64.7519 0/0:31:31,0:31:1210:0:0:0,-9.33193,-109.171 0/0:23:23,0:23:929:0:0:0,-6.92369,-83.9128 0/0:17:17,0:17:689:0:0:0,-5.11751,-62.3391 dDocent_Contig_658 15 . C T 600.231 . AB=0.247619;ABP=61.1024;AC=3;AF=0.25;AN=12;AO=29;CIGAR=2X;DP=192;DPB=192;DPRA=1.336;EPP=65.983;EPPR=356.96;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.62069;PAIREDR=0.613497;PAO=0;PQA=0;PQR=0;PRO=0;QA=1141;QR=6510;RO=163;RPL=0;RPP=65.983;RPPR=356.96;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=163;SRP=356.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:33:31,2:31:1249:2:78:0,-2.53069,-105.274 0|0:29:28,1:28:1120:1:39:0,-4.83331,-97.1901 0|0:25:25,0:25:994:0:0:0,-7.52575,-89.7562 0|1:45:39,6:39:1566:6:233:-7.79179,0,-127.632 0|1:30:21,9:21:824:9:360:-23.7311,0,-65.436 0|1:30:19,11:19:757:11:431:-30.1097,0,-59.4217 dDocent_Contig_659 8 . T C 808.09 . AB=0.234177;ABP=99.9844;AC=2;AF=0.166667;AN=12;AO=47;CIGAR=1X1M1X;DP=570;DPB=570;DPRA=0.946701;EPP=105.07;EPPR=1136.52;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.12766;PAIREDR=0.779693;PAO=0;PQA=0;PQR=0;PRO=0;QA=1808;QR=20125;RO=522;RPL=0;RPP=105.07;RPPR=1136.52;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=522;SRP=1136.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:78:77,0:77:2964:0:0:0,-23.1793,-266.555 0|0:96:95,1:95:3689:1:34:0,-25.5,-328.715 0|0:119:119,0:119:4620:0:0:0,-35.8226,-415.831 0|0:119:110,9:110:4225:9:346:0,-4.32335,-348.823 0|1:79:50,29:50:1898:29:1117:-77.0497,0,-147.281 0|1:79:71,8:71:2729:8:311:-4.57294,0,-222.011 dDocent_Contig_660 98 . N G 50.5117 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.21888;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=53;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:53:-5.03414,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_661 8 . T C 2705.8 . AB=0.12399;ABP=2588.03;AC=2;AF=0.166667;AN=12;AO=262;CIGAR=1X;DP=5149;DPB=5149;DPRA=1.39377;EPP=571.936;EPPR=10615;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10095;QR=186835;RO=4887;RPL=0;RPP=571.936;RPPR=10615;RPR=262;RUN=1;SAF=262;SAP=571.936;SAR=0;SRF=4887;SRP=10615;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:772:772,0:772:29452:0:0:0,-232.395,-2648.94 0/0:893:892,1:892:33986:1:39:0,-264.923,-3052.78 0/0:563:563,0:563:21609:0:0:0,-169.48,-1943.6 0/0:816:816,0:816:31261:0:0:0,-245.64,-2811.58 0/1:1070:928,142:928:35541:142:5498:-172.688,0,-2874.39 0/1:1035:916,119:916:34986:119:4558:-98.7063,0,-2835.03 dDocent_Contig_662 21 . G A 2596.77 . AB=0.221811;ABP=366.666;AC=2;AF=0.166667;AN=12;AO=123;CIGAR=1X;DP=1555;DPB=1555;DPRA=0.871252;EPP=270.101;EPPR=3110.39;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4817;QR=55312;RO=1431;RPL=0;RPP=270.101;RPPR=3110.39;RPR=123;RUN=1;SAF=123;SAP=270.101;SAR=0;SRF=1431;SRP=3110.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:210:208,2:208:8004:2:80:0,-55.6247,-712.484 0/0:237:236,1:236:9118:1:36:0,-67.7458,-816.628 0/0:373:373,0:373:14461:0:0:0,-112.284,-1300.6 0/0:194:194,0:194:7514:0:0:0,-58.3998,-675.982 0/1:276:229,47:229:8847:47:1863:-84.808,0,-712.794 0/1:265:191,73:191:7368:73:2838:-175.682,0,-583.004 dDocent_Contig_663 24 . G A 2903.35 . AB=0.436441;ABP=11.2913;AC=6;AF=0.5;AN=12;AO=103;CIGAR=1X;DP=236;DPB=236;DPRA=0;EPP=226.672;EPPR=289.645;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.728155;PAIREDR=0.992424;PAO=0;PQA=0;PQR=0;PRO=0;QA=4039;QR=5207;RO=132;RPL=0;RPP=226.672;RPPR=289.645;RPR=103;RUN=1;SAF=103;SAP=226.672;SAR=0;SRF=132;SRP=289.645;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:16,5:16:638:5:199:-11.9667,0,-51.4316 0/1:24:16,8:16:614:8:317:-21.6701,0,-48.3583 0/1:69:50,19:50:1975:19:732:-45.4272,0,-157.182 0/1:23:13,10:13:518:10:400:-29.4362,0,-40.0406 0/1:58:25,32:25:988:32:1241:-94.3875,0,-71.6488 0/1:41:12,29:12:474:29:1150:-91.4445,0,-30.667 dDocent_Contig_664 64 . A T 7639.91 . AB=0.585812;ABP=30.9612;AC=6;AF=0.5;AN=12;AO=256;CIGAR=2X;DP=437;DPB=437;DPRA=0;EPP=558.907;EPPR=393.875;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5625;PAIREDR=0.705556;PAO=0;PQA=0;PQR=0;PRO=0;QA=9979;QR=6053;RO=180;RPL=256;RPP=558.907;RPPR=393.875;RPR=0;RUN=1;SAF=256;SAP=558.907;SAR=0;SRF=0;SRP=393.875;SRR=180;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:49:17,32:17:565:32:1260:-98.9279,0,-36.4147 0|1:67:19,48:19:655:48:1876:-148.899,0,-39.1041 0|1:69:30,39:30:977:39:1502:-114.659,0,-67.4556 0|1:75:33,42:33:1104:42:1639:-125.176,0,-77.0842 0|1:90:43,46:43:1450:46:1809:-135.932,0,-103.69 0|1:87:38,49:38:1302:49:1893:-144.395,0,-91.2913 dDocent_Contig_665 28 . T C 100687 . AB=0.836401;ABP=2406.31;AC=8;AF=0.666667;AN=12;AO=3076;CIGAR=1X;DP=3535;DPB=3535;DPRA=0;EPP=6682.46;EPPR=995.373;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.9987;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=122459;QR=17914;RO=457;RPL=0;RPP=6682.46;RPPR=995.373;RPR=3076;RUN=1;SAF=3076;SAP=6682.46;SAR=0;SRF=457;SRP=995.373;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:471:23,448:23:890:448:17733:-1514.17,-61.3844,0 1/1:619:35,583:35:1369:583:23182:-1960.94,-62.9439,0 0/1:578:74,503:74:2875:503:20109:-1634.02,0,-84.7698 0/1:577:98,479:98:3822:479:19062:-1540.33,0,-170.311 0/1:650:112,538:112:4417:538:21430:-1731.22,0,-201.805 0/1:640:115,525:115:4541:525:20943:-1690.44,0,-215.95 dDocent_Contig_667 20 . C T 1719.47 . AB=0.2;ABP=288.342;AC=6;AF=0.5;AN=12;AO=73;CIGAR=1X3M;DP=365;DPB=365;DPRA=0;EPP=161.528;EPPR=593.651;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=0.0136986;PAIREDR=0.327206;PAO=0;PQA=0;PQR=0;PRO=0;QA=2923;QR=10658;RO=272;RPL=0;RPP=161.528;RPPR=593.651;RPR=73;RUN=1;SAF=73;SAP=161.528;SAR=0;SRF=272;SRP=593.651;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:51:32,0,19:32:1221:0,19:0,763:-53.6361,-63.2691,-163.417,0,-100.542,-94.8222 0|1:59:42,1,15:42:1654:1,15:39,600:-36.7802,-46.2182,-181.977,0,-132.853,-131.543 0|1:40:32,0,8:32:1257:0,8:0,322:-17.3066,-26.9395,-130.318,0,-103.778,-101.37 0|1:81:72,0,9:72:2828:0,9:0,351:-7.56198,-29.2361,-261.825,0,-232.979,-230.27 0|1:56:41,10,5:41:1609:10,5:395,202:-20.1551,0,-129.303,-15.8409,-115.659,-146.658 0|1:78:53,7,17:53:2089:7,17:282,685:-40.5044,-33.2158,-202.968,0,-148.613,-166.74 dDocent_Contig_668 64 . A G 365.997 . AB=0.135;ABP=234.446;AC=2;AF=0.166667;AN=12;AO=33;CIGAR=1X;DP=398;DPB=398;DPRA=2.87288;EPP=74.6689;EPPR=795.598;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.994521;PAO=0;PQA=0;PQR=0;PRO=0;QA=1312;QR=14382;RO=365;RPL=33;RPP=74.6689;RPPR=795.598;RPR=0;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=365;SRP=795.598;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:69:64,5:64:2524:5:195:0,-2.84812,-209.39 0/1:64:56,8:56:2199:8:318:-9.72108,0,-178.822 0/1:136:117,19:117:4598:19:759:-27.6922,0,-372.836 0/0:70:69,1:69:2720:1:40:0,-17.0764,-240.937 0/0:24:24,0:24:949:0:0:0,-7.22472,-85.7158 0/0:35:35,0:35:1392:0:0:0,-10.536,-125.537 dDocent_Contig_669 27 . G A 24177 . AB=0.786749;ABP=692.927;AC=6;AF=0.5;AN=12;AO=760;CIGAR=1X;DP=966;DPB=966;DPRA=0;EPP=1653.33;EPPR=450.334;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.992105;PAIREDR=0.932039;PAO=0;PQA=0;PQR=0;PRO=0;QA=30146;QR=8145;RO=206;RPL=0;RPP=1653.33;RPPR=450.334;RPR=760;RUN=1;SAF=760;SAP=1653.33;SAR=0;SRF=206;SRP=450.334;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:186:36,150:36:1418:150:5907:-475.45,0,-71.8842 0/1:202:41,161:41:1636:161:6381:-513.251,0,-86.6608 0/1:134:27,107:27:1023:107:4258:-342.843,0,-52.011 0/1:175:45,130:45:1792:130:5200:-415.174,0,-108.81 0/1:109:24,85:24:957:85:3357:-269.382,0,-53.6161 0/1:160:33,127:33:1319:127:5043:-405.601,0,-70.805 dDocent_Contig_670 98 . N T 971.204 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=35;CIGAR=1X;DP=36;DPB=36;DPRA=0;EPP=79.0118;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1053;QR=0;RO=0;RPL=35;RPP=79.0118;RPPR=0;RPR=0;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,1:0:0:1:35:-3.2887,-0.30103,0 1/1:18:0,18:0:0:18:567:-51.3305,-5.41854,0 1/1:2:0,2:0:0:2:41:-3.89396,-0.60206,0 1/1:8:0,8:0:0:8:242:-22.0757,-2.40824,0 1/1:3:0,3:0:0:3:82:-7.65196,-0.90309,0 1/1:3:0,3:0:0:3:86:-8.02461,-0.90309,0 dDocent_Contig_671 98 . N G 251.653 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=263;QR=0;RO=0;RPL=8;RPP=20.3821;RPPR=0;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:159:-14.6241,-1.50515,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 dDocent_Contig_672 53 . G T 953.279 . AB=0.179856;ABP=250.496;AC=3;AF=0.25;AN=12;AO=55;CIGAR=1X;DP=613;DPB=613;DPRA=1.27711;EPP=122.441;EPPR=1214.69;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.998208;PAO=0;PQA=0;PQR=0;PRO=0;QA=2188;QR=21853;RO=558;RPL=55;RPP=122.441;RPPR=1214.69;RPR=0;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=558;SRP=1214.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:91:88,3:88:3457:3:110:0,-17.1344,-300.928 0/0:83:83,0:83:3298:0:0:0,-24.9855,-296.89 0/0:161:159,2:159:6217:2:82:0,-40.6861,-551.521 0/1:102:91,11:91:3512:11:445:-9.70065,0,-285.415 0/1:84:72,12:72:2832:12:486:-18.8051,0,-229.721 0/1:92:65,27:65:2537:27:1065:-68.4317,0,-200.782 dDocent_Contig_673 107 . N C 91.013 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=88;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:1:0,1:0:0:1:12:-1.19999,-0.30103,0 1/1:2:0,2:0:0:2:42:-3.9887,-0.60206,0 dDocent_Contig_674 98 . N T 266.393 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=9;CIGAR=1X;DP=10;DPB=10;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=2.1684e-19;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=277;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 1/1:7:0,6:0:0:6:188:-17.113,-1.80618,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:25:-2.49986,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_675 98 . N T 5030.95 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=162;CIGAR=2X;DP=162;DPB=942.5;DPRA=0;EPP=354.789;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=59.6235;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.993827;PAIREDR=0;PAO=1561;PQA=53949;PQR=0;PRO=0;QA=5583;QR=0;RO=0;RPL=162;RPP=354.789;RPPR=0;RPR=0;RUN=1;SAF=162;SAP=354.789;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:25:0,25:0:0:25:866:-77.9114,-7.52575,0 1|1:14:0,14:0:0:14:485:-43.6339,-4.21442,0 1|1:18:0,18:0:0:18:611:-54.9518,-5.41854,0 1|1:17:0,17:0:0:17:579:-52.0816,-5.11751,0 1|1:47:0,47:0:0:47:1616:-145.386,-14.1484,0 1|1:41:0,41:0:0:41:1426:-128.285,-12.3422,0 dDocent_Contig_678 54 . A T 98.3447 . AB=0.153846;ABP=57.1301;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X1M1X;DP=371;DPB=371;DPRA=1.05882;EPP=37.7539;EPPR=769.54;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.625;PAIREDR=0.674221;PAO=0;PQA=0;PQR=0;PRO=0;QA=567;QR=13157;RO=353;RPL=11;RPP=7.89611;RPPR=6.26443;RPR=5;RUN=1;SAF=11;SAP=7.89611;SAR=5;SRF=188;SRP=6.26443;SRR=165;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:32:29,2:29:1086:2:73:0,-2.76231,-91.1085 0|0:104:100,4:100:3738:4:139:0,-18.4562,-323.683 0|0:64:62,2:62:2301:2:72:0,-12.4293,-200.471 0|1:52:44,8:44:1640:8:283:-10.1532,0,-132.209 0|0:58:57,0:57:2108:0:0:0,-17.1587,-189.849 0|0:61:61,0:61:2284:0:0:0,-18.3628,-205.779 dDocent_Contig_679 84 . A T 827.278 . AB=0.146691;ABP=609.1;AC=3;AF=0.25;AN=12;AO=113;CIGAR=1X;DP=1286;DPB=1286;DPRA=0;EPP=248.387;EPPR=2543.63;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.973451;PAIREDR=0.998291;PAO=0;PQA=0;PQR=0;PRO=0;QA=3860;QR=39565;RO=1170;RPL=113;RPP=248.387;RPPR=2543.63;RPR=0;RUN=1;SAF=113;SAP=248.387;SAR=0;SRF=1170;SRP=2543.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:193:153,39:153:5171:39:1342:-63.2051,0,-407.69 0/1:239:210,29:210:7100:29:984:-16.9223,0,-567.169 0/1:127:113,14:113:3817:14:468:-4.20983,0,-305.52 0/0:223:206,16:206:6947:16:546:0,-17.5078,-575.899 0/0:295:280,14:280:9513:14:485:0,-44.7137,-812.241 0/0:209:208,1:208:7017:1:35:0,-59.4166,-628.15 dDocent_Contig_680 23 . C T 1285 . AB=0.212454;ABP=199.071;AC=4;AF=0.333333;AN=12;AO=67;CIGAR=1X9M;DP=436;DPB=437.2;DPRA=0;EPP=148.499;EPPR=769.54;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2671;QR=13829;RO=353;RPL=0;RPP=148.499;RPPR=769.54;RPR=67;RUN=1;SAF=67;SAP=148.499;SAR=0;SRF=353;SRP=769.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:43:30,0,0,13:30:1155:0,0,13:0,0,509:-33.2084,-42.2393,-137.048,-42.2393,-137.048,-137.048,0,-95.1976,-95.1976,-91.2842 0|0:70:62,0,5,2:62:2421:0,5,2:0,201,79:0,-18.6639,-217.669,-2.09878,-201.104,-199.599,-12.1653,-211.168,-194.604,-210.566 0|1:46:36,0,3,6:36:1431:0,3,6:0,121,245:-9.38186,-20.2189,-138.021,-10.2458,-128.047,-127.144,0,-117.804,-107.83,-115.998 0|1:70:48,6,0,16:48:1869:6,0,16:238,0,641:-38.3609,-33.2197,-185.004,-52.8103,-186.81,-206.402,0,-134,-153.592,-148.776 0|0:93:86,0,0,7:86:3382:0,0,7:0,0,264:0,-25.8886,-304.079,-25.8886,-304.079,-304.079,-3.88212,-282.451,-282.451,-280.344 0|1:114:91,0,0,23:91:3571:0,0,23:0,0,933:-49.9536,-77.3473,-371.007,-77.3473,-371.007,-371.007,0,-294.062,-294.062,-287.138 dDocent_Contig_681 38 . G T 7527.88 . AB=0.602469;ABP=39.9468;AC=4;AF=0.333333;AN=12;AO=244;CIGAR=1X;DP=549;DPB=549;DPRA=1.40625;EPP=532.85;EPPR=665.309;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9739;QR=12186;RO=305;RPL=0;RPP=532.85;RPPR=665.309;RPR=244;RUN=1;SAF=244;SAP=532.85;SAR=0;SRF=305;SRP=665.309;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:87:87,0:87:3471:0:0:0,-26.1896,-312.429 0/1:34:31,3:31:1249:3:123:-1.22977,0,-102.441 0/0:57:57,0:57:2300:0:0:0,-17.1587,-207.155 0/1:118:77,41:77:3057:41:1640:-112.306,0,-239.696 0/1:134:36,98:36:1422:98:3905:-311.09,0,-87.891 0/1:119:17,102:17:687:102:4071:-330.542,0,-26.3361 dDocent_Contig_682 146 . G A 113.88 . AB=0.122449;ABP=124.347;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=562;DPB=562;DPRA=0.748166;EPP=37.7539;EPPR=1188.63;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=586;QR=20185;RO=546;RPL=0;RPP=37.7539;RPPR=1188.63;RPR=16;RUN=1;SAF=0;SAP=37.7539;SAR=16;SRF=0;SRP=1188.63;SRR=546;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:55:51,4:51:1902:4:132:0,-4.3562,-159.226 0/1:98:86,12:86:3175:12:454:-11.7067,0,-256.41 0/0:55:55,0:55:2032:0:0:0,-16.5566,-183.111 0/0:130:130,0:130:4834:0:0:0,-39.1339,-435.111 0/0:146:146,0:146:5305:0:0:0,-43.9504,-477.479 0/0:78:78,0:78:2937:0:0:0,-23.4803,-264.505 dDocent_Contig_683 37 . T C 1455.65 . AB=0.173333;ABP=420.107;AC=4;AF=0.333333;AN=12;AO=78;CIGAR=1X;DP=644;DPB=644;DPRA=1.15979;EPP=172.385;EPPR=1229.89;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99292;PAO=0;PQA=0;PQR=0;PRO=0;QA=3133;QR=21034;RO=565;RPL=0;RPP=172.385;RPPR=1229.89;RPR=78;RUN=1;SAF=78;SAP=172.385;SAR=0;SRF=565;SRP=1229.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:77:68,9:68:2516:9:366:-10.1256,0,-203.463 0/1:132:106,26:106:3925:26:1046:-54.6961,0,-313.621 0/1:153:118,35:118:4450:35:1398:-80.0149,0,-354.505 0/1:88:79,8:79:2941:8:323:-3.13306,0,-238.589 0/0:84:84,0:84:3110:0:0:0,-25.2865,-280.072 0/0:110:110,0:110:4092:0:0:0,-33.1133,-368.374 dDocent_Contig_684 107 . N T 307.062 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=11;CIGAR=1X;DP=11;DPB=11;DPRA=0;EPP=26.8965;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=318;QR=0;RO=0;RPL=0;RPP=26.8965;RPPR=0;RPR=11;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:63:-5.98364,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:6:0,6:0:0:6:181:-16.5856,-1.80618,0 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 dDocent_Contig_685 48 . C T 282.279 . AB=0.170213;ABP=91.8097;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=267;DPB=267;DPRA=0.905263;EPP=3.0103;EPPR=3.44108;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.785425;PAO=0;PQA=0;PQR=0;PRO=0;QA=792;QR=9772;RO=247;RPL=0;RPP=46.4397;RPPR=513.623;RPR=20;RUN=1;SAF=10;SAP=3.0103;SAR=10;SRF=123;SRP=3.01909;SRR=124;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:36,0:36:1429:0:0:0,-10.8371,-128.864 0/0:59:59,0:59:2366:0:0:0,-17.7608,-213.096 0/0:39:37,2:37:1464:2:82:0,-3.96049,-124.229 0/1:35:27,8:27:1021:8:306:-17.3635,0,-81.6269 0/0:39:37,2:37:1455:2:81:0,-4.05444,-123.507 0/1:59:51,8:51:2037:8:323:-11.678,0,-165.754 dDocent_Contig_686 14 . T C 841.582 . AB=0.233766;ABP=97.8219;AC=1;AF=0.0833333;AN=12;AO=37;CIGAR=1X;DP=492;DPB=492;DPRA=1.45263;EPP=83.3548;EPPR=991.03;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.936264;PAO=0;PQA=0;PQR=0;PRO=0;QA=1491;QR=18256;RO=455;RPL=0;RPP=83.3548;RPPR=991.03;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=455;SRP=991.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:568:0:0:0,-4.21442,-51.4622 0/0:48:48,0:48:1920:0:0:0,-14.4494,-172.997 0/0:53:52,1:52:2099:1:40:0,-11.9589,-185.09 0/0:69:69,0:69:2786:0:0:0,-20.7711,-250.839 0/0:154:154,0:154:6179:0:0:0,-46.3586,-555.855 0/1:154:118,36:118:4704:36:1451:-84.4769,0,-376.907 dDocent_Contig_687 13 . A G 5096.02 . AB=0.264484;ABP=385.55;AC=6;AF=0.5;AN=12;AO=210;CIGAR=1X;DP=794;DPB=794;DPRA=0;EPP=459.02;EPPR=1271.15;GTI=0;LEN=1;MEANALT=1;MQM=59.5714;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8347;QR=23307;RO=584;RPL=0;RPP=459.02;RPPR=1271.15;RPR=210;RUN=1;SAF=210;SAP=459.02;SAR=0;SRF=584;SRP=1271.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:119:88,31:88:3491:31:1219:-74.1208,0,-278.414 0/1:177:148,29:148:5930:29:1165:-51.8481,0,-480.184 0/1:139:106,33:106:4232:33:1291:-74.6026,0,-339 0/1:185:136,49:136:5413:49:1963:-121.128,0,-431.327 0/1:92:47,45:47:1885:45:1801:-134.562,0,-142.16 0/1:82:59,23:59:2356:23:908:-57.3378,0,-187.511 dDocent_Contig_688 70 . A C 113.062 . AB=0.15;ABP=66.8516;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=324;DPB=324;DPRA=1.34783;EPP=31.2394;EPPR=678.338;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.846154;PAIREDR=0.736334;PAO=0;PQA=0;PQR=0;PRO=0;QA=474;QR=11269;RO=311;RPL=13;RPP=31.2394;RPPR=678.338;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=311;SRP=678.338;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1006:0:0:0,-8.42884,-90.8529 0/0:82:80,2:80:2914:2:74:0,-17.6586,-255.454 0/0:44:44,0:44:1598:0:0:0,-13.2453,-144.098 0/0:66:66,0:66:2374:0:0:0,-19.868,-213.906 0/1:60:51,9:51:1847:9:326:-11.625,0,-148.438 0/0:44:42,2:42:1530:2:74:0,-6.21944,-130.962 dDocent_Contig_689 53 . G C 1544.99 . AB=0.143979;ABP=844.132;AC=4;AF=0.333333;AN=12;AO=126;CIGAR=1X;DP=1123;DPB=1123;DPRA=0;EPP=276.616;EPPR=2165.8;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998996;PAO=0;PQA=0;PQR=0;PRO=0;QA=4880;QR=38078;RO=996;RPL=126;RPP=276.616;RPPR=2165.8;RPR=0;RUN=1;SAF=126;SAP=276.616;SAR=0;SRF=996;SRP=2165.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:112:98,14:98:3794:14:523:-13.6892,0,-307.803 0/1:182:151,31:151:5696:31:1225:-55.7402,0,-457.777 0/1:320:281,39:281:10762:39:1549:-43.3294,0,-871.725 0/1:150:124,26:124:4737:26:989:-44.146,0,-381.162 0/0:183:168,14:168:6431:14:521:0,-7.67528,-531.432 0/0:176:174,2:174:6658:2:73:0,-46.0512,-592.123 dDocent_Contig_690 12 . T A 1931.88 . AB=0.125567;ABP=1612.89;AC=2;AF=0.166667;AN=12;AO=287;CIGAR=1X;DP=3814;DPB=3814;DPRA=0;EPP=626.223;EPPR=7659.62;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11347;QR=136180;RO=3526;RPL=0;RPP=626.223;RPPR=7659.62;RPR=287;RUN=1;SAF=287;SAP=626.223;SAR=0;SRF=3526;SRP=7659.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:494:461,32:461:17752:32:1251:0,-35.9577,-1483.71 0/0:670:647,23:647:24940:23:900:0,-120.387,-2161.59 0/1:522:473,49:473:18367:49:1897:-13.7982,0,-1494.71 0/0:685:630,55:630:24345:55:2180:0,-9.82489,-1993.04 0/0:643:632,11:632:24332:11:440:0,-153.607,-2148.32 0/1:800:683,117:683:26444:117:4679:-180.204,0,-2137.31 dDocent_Contig_691 7 . T A 397.434 . AB=0.194444;ABP=90.593;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X;DP=199;DPB=199;DPRA=2.31667;EPP=50.7827;EPPR=387.361;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=843;QR=6738;RO=177;RPL=0;RPP=50.7827;RPPR=387.361;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=177;SRP=387.361;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1048:0:0:0,-8.42884,-94.6218 0/0:31:30,1:30:1137:1:39:0,-5.43537,-98.7321 0/1:66:50,16:50:1902:16:611:-35.4588,0,-151.555 0/1:42:37,5:37:1424:5:193:-5.09823,0,-115.797 0/0:20:20,0:20:762:0:0:0,-6.0206,-68.9063 0/0:12:12,0:12:465:0:0:0,-3.61236,-42.202 dDocent_Contig_692 35 . T G 85964.8 . AB=0.0458453;ABP=6255.42;AC=0;AF=0;AN=12;AO=160;CIGAR=2X1M;DP=3490;DPB=3490;DPRA=0;EPP=350.446;EPPR=647.938;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6239;QR=11722;RO=297;RPL=0;RPP=350.446;RPPR=647.938;RPR=160;RUN=1;SAF=160;SAP=350.446;SAR=0;SRF=297;SRP=647.938;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:442:85,74,8,269:85:3334:74,8,269:2924,318,10505:-837.878,-622.865,-874.746,-837.283,-870.84,-1109.03,0,-33.555,-247.973,-193.178 0|0:614:61,184,46,294:61:2427:184,46,294:7281,1777,11522:-1328.36,-747.524,-891.962,-1200.79,-801.418,-1386.77,-399.376,0,-453.271,-510.701 0|0:579:76,138,71,284:76:2997:138,71,284:5433,2779,11223:-1100.91,-676.889,-881.909,-895.295,-694.962,-1120.48,-200.333,0,-218.406,-361.403 0|0:589:32,146,28,366:32:1266:146,28,366:5758,1084,14452:-1548.95,-1084.87,-1145.1,-1469.55,-1100.01,-1565.3,-369.536,0,-384.684,-363.542 0|0:666:27,248,4,385:27:1065:248,4,385:9817,159,15184:-1961.3,-1161.53,-1174.49,-1956.34,-1236.06,-2042.76,-720.282,0,-794.814,-692.008 0|0:600:16,290,3,290:16:633:290,3,290:11504,122,11350:-1823.07,-880.982,-845.778,-1817.82,-923.013,-1869.02,-894.809,0,-936.84,-859.605 dDocent_Contig_693 18 . C A 12228.9 . AB=0.162211;ABP=4414.28;AC=5;AF=0.416667;AN=12;AO=769;CIGAR=1X;DP=5022;DPB=5022;DPRA=0;EPP=1672.87;EPPR=9233.94;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=30397;QR=170799;RO=4251;RPL=0;RPP=1672.87;RPPR=9233.94;RPR=769;RUN=1;SAF=769;SAP=1672.87;SAR=0;SRF=4251;SRP=9233.94;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:571:524,47:524:21018:47:1877:0,-2.75521,-1720.66 0/1:747:671,76:671:26930:76:3003:-45.4926,0,-2196.36 0/1:598:534,64:534:21450:64:2530:-47.8305,0,-1748.57 0/1:654:517,136:517:20731:136:5337:-283.215,0,-1667 0/1:1241:1019,222:1019:40986:222:8756:-413.971,0,-3311.14 0/1:1211:986,224:986:39684:224:8894:-435.579,0,-3203.32 dDocent_Contig_694 1 . N G 62.8521 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.21888;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=66;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:66:-6.26818,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_695 14 . A G 472.544 . AB=0.117769;ABP=617.214;AC=1;AF=0.0833333;AN=12;AO=78;CIGAR=1X;DP=2816;DPB=2816;DPRA=0.80855;EPP=172.385;EPPR=5946.33;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999635;PAO=0;PQA=0;PQR=0;PRO=0;QA=2930;QR=103527;RO=2737;RPL=0;RPP=172.385;RPPR=5946.33;RPR=78;RUN=1;SAF=78;SAP=172.385;SAR=0;SRF=2737;SRP=5946.33;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:313:305,8:305:11460:8:286:0,-68.1445,-1004.92 0/1:484:427,57:427:16125:57:2145:-47.5732,0,-1304.83 0/0:455:450,5:450:17189:5:194:0,-119.136,-1528.28 0/0:488:480,8:480:18157:8:305:0,-119.094,-1605.45 0/0:546:545,0:545:20654:0:0:0,-164.061,-1857.41 0/0:530:530,0:530:19942:0:0:0,-159.546,-1793.82 dDocent_Contig_696 1 . N G 149.647 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=54;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=160;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:120:-11.1879,-0.90309,0 1/1:1:0,1:0:0:1:40:-3.45449,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_697 98 . N T 64.7496 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=2X;DP=2;DPB=5;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.21888;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=68;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_698 98 . N G 141.096 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=136;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:42:-3.9887,-0.60206,0 dDocent_Contig_699 17 . A T 12408.9 . AB=0.162482;ABP=1342.77;AC=6;AF=0.5;AN=12;AO=220;CIGAR=2M1X1M2X;DP=2381;DPB=2381.83;DPRA=0;EPP=480.734;EPPR=3027.87;GTI=0;LEN=1;MEANALT=6.33333;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=4.44089e-16;PAIRED=1;PAIREDR=0.992103;PAO=0;PQA=0;PQR=0;PRO=0;QA=8601;QR=54492;RO=1393;RPL=0;RPP=480.734;RPPR=3027.87;RPR=220;RUN=1;SAF=220;SAP=480.734;SAR=0;SRF=1393;SRP=3027.87;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:327:261,13,29,0,13:261:10169:13,29,0,13:519,1144,0,513:-15.556,-51.3789,-883.223,0,-793.009,-827.025,-94.1248,-887.136,-835.755,-929.882,-51.9161,-844.926,-793.545,-887.672,-883.759 0|1:452:280,23,119,17,5:280:10997:23,119,17,5:910,4613,672,198:-294.66,-304.059,-1201.59,0,-829.566,-868.632,-323.647,-1153.22,-849.154,-1222.99,-362.677,-1192.25,-888.183,-1211.83,-1265.63 0|1:284:214,13,45,0,12:214:8461:13,45,0,12:519,1750,0,462:-79.3862,-101.062,-793.437,0,-653.542,-682.739,-143.807,-797.35,-696.285,-840.093,-105.876,-759.419,-658.354,-802.162,-798.549 0|1:416:311,34,59,0,12:311:12138:34,59,0,12:1345,2299,0,468:-95.3352,-78.2844,-1065.8,0,-887.082,-979.991,-188.955,-1076.04,-997.751,-1186.71,-150.491,-1037.57,-959.286,-1148.24,-1144.63 0|1:481:191,26,164,99,0:191:7426:26,164,99,0:1032,6406,3891,0:-469.13,-441.674,-1044.04,0,-525.242,-560.826,-206.579,-731.823,-290.147,-786.973,-526.627,-1051.87,-610.195,-816.775,-1136.82 0|1:421:136,34,102,104,25:136:5301:34,102,104,25:1353,3947,4038,985:-290.823,-220.361,-645.811,-7.55672,-331.839,-412.536,0,-324.283,-111.479,-404.377,-250.734,-575.017,-362.212,-354.656,-678.893 dDocent_Contig_700 73 . G A 31.9352 . AB=0.138889;ABP=43.7857;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=354;DPB=354;DPRA=0.566038;EPP=13.8677;EPPR=760.854;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.968481;PAO=0;PQA=0;PQR=0;PRO=0;QA=156;QR=11375;RO=349;RPL=5;RPP=13.8677;RPPR=760.854;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=349;SRP=760.854;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:773:0:0:0,-7.22472,-69.875 0/0:80:80,0:80:2624:0:0:0,-24.0824,-236.42 0/1:36:31,5:31:988:5:156:-3.512,0,-78.3772 0/0:77:77,0:77:2504:0:0:0,-23.1793,-225.624 0/0:71:71,0:71:2321:0:0:0,-21.3731,-209.159 0/0:66:66,0:66:2165:0:0:0,-19.868,-195.122 dDocent_Contig_701 43 . A G 207.356 . AB=0.115183;ABP=248.682;AC=1;AF=0.0833333;AN=12;AO=42;CIGAR=1X;DP=1408;DPB=1408;DPRA=0.726481;EPP=94.2121;EPPR=2969.24;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993411;PAO=0;PQA=0;PQR=0;PRO=0;QA=1678;QR=54390;RO=1366;RPL=0;RPP=94.2121;RPPR=2969.24;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=1366;SRP=2969.24;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:191:169,22:169:6675:22:866:-20.7534,0,-542.985 0/0:184:182,2:182:7267:2:82:0,-47.6098,-645.909 0/0:108:106,2:106:4234:2:80:0,-24.9197,-373.434 0/0:236:236,0:236:9408:0:0:0,-71.0431,-846.165 0/0:338:338,0:338:13468:0:0:0,-101.748,-1211.15 0/0:351:335,16:335:13338:16:650:0,-46.8282,-1140.63 dDocent_Contig_702 110 . T A 31.6213 . AB=0.136364;ABP=28.2783;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=127;DPB=127;DPRA=1.52778;EPP=16.0391;EPPR=261.416;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.806723;PAO=0;PQA=0;PQR=0;PRO=0;QA=209;QR=4090;RO=119;RPL=0;RPP=16.0391;RPPR=261.416;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=261.416;SRR=119;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:19,3:19:658:3:105:-3.1735,0,-52.9216 0/0:33:29,3:29:994:3:104:0,-0.2789,-80.0667 0/0:10:10,0:10:347:0:0:0,-3.0103,-31.5651 0/0:23:22,0:22:748:0:0:0,-6.62266,-67.2858 0/0:23:23,0:23:798:0:0:0,-6.92369,-72.1401 0/0:16:16,0:16:545:0:0:0,-4.81648,-49.3737 dDocent_Contig_703 7 . A T 3204.67 . AB=0.164239;ABP=1213.31;AC=6;AF=0.5;AN=12;AO=203;CIGAR=1X;DP=1236;DPB=1236;DPRA=0;EPP=443.819;EPPR=2241.8;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.53202;PAIREDR=0.595538;PAO=0;PQA=0;PQR=0;PRO=0;QA=7716;QR=39294;RO=1031;RPL=0;RPP=443.819;RPPR=2241.8;RPR=203;RUN=1;SAF=203;SAP=443.819;SAR=0;SRF=1031;SRP=2241.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:168:119,49:119:4507:49:1864:-117.436,0,-355.122 0/1:198:161,37:161:6152:37:1384:-65.2343,0,-494.019 0/1:162:145,16:145:5519:16:613:-6.92484,0,-448.132 0/1:205:172,33:172:6538:33:1260:-51.9795,0,-526.62 0/1:209:187,21:187:7169:21:791:-8.78264,0,-582.36 0/1:294:247,47:247:9409:47:1804:-74.1076,0,-758.02 dDocent_Contig_704 52 . T A 13150.6 . AB=0.358209;ABP=295.511;AC=6;AF=0.5;AN=12;AO=600;CIGAR=1X;DP=1675;DPB=1675;DPRA=0;EPP=1305.89;EPPR=2335.17;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0.998333;PAIREDR=0.989758;PAO=0;PQA=0;PQR=0;PRO=0;QA=20242;QR=36378;RO=1074;RPL=600;RPP=1305.89;RPPR=2335.17;RPR=0;RUN=1;SAF=600;SAP=1305.89;SAR=0;SRF=1074;SRP=2335.17;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:370:192,178:192:6421:178:5894:-419.234,0,-466.643 0/1:355:244,111:244:8235:111:3700:-226.358,0,-634.359 0/1:171:87,83:87:2933:83:2876:-207.741,0,-212.865 0/1:311:228,83:228:7850:83:2860:-164.026,0,-612.94 0/1:143:120,23:120:4129:23:755:-25.2057,0,-328.756 0/1:325:203,122:203:6810:122:4157:-276.493,0,-515.16 dDocent_Contig_705 66 . C A 858.149 . AB=0.14532;ABP=446.632;AC=3;AF=0.25;AN=12;AO=93;CIGAR=1X;DP=849;DPB=849;DPRA=0;EPP=204.957;EPPR=1640.3;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.870968;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3606;QR=29917;RO=754;RPL=93;RPP=204.957;RPPR=1640.3;RPR=0;RUN=1;SAF=93;SAP=204.957;SAR=0;SRF=754;SRP=1640.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:129:117,12:117:4556:12:421:0,-0.628136,-371.79 0/1:153:130,22:130:5175:22:866:-32.092,0,-419.458 0/1:83:64,19:64:2551:19:743:-42.1945,0,-204.74 0/0:141:133,8:133:5325:8:316:0,-13.6406,-450.291 0/1:170:152,18:152:5993:18:711:-13.1351,0,-487.984 0/0:173:158,14:158:6317:14:549:0,-2.38465,-518.521 dDocent_Contig_706 1 . N G 110.102 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.91202;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=118;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:118:-11.0016,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_707 20 . A C 629.422 . AB=0.151163;ABP=275.707;AC=4;AF=0.333333;AN=12;AO=39;CIGAR=1X;DP=384;DPB=384;DPRA=1.02381;EPP=87.6977;EPPR=752.168;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.974359;PAIREDR=0.982609;PAO=0;PQA=0;PQR=0;PRO=0;QA=1573;QR=13710;RO=345;RPL=0;RPP=87.6977;RPPR=752.168;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=345;SRP=752.168;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:65:54,11:54:2112:11:444:-20.7487,0,-170.693 0/1:64:54,10:54:2158:10:404:-17.4539,0,-175.132 0/1:57:49,8:49:1965:8:325:-12.4607,0,-159.888 0/1:72:62,10:62:2487:10:400:-14.6843,0,-202.294 0/0:93:93,0:93:3663:0:0:0,-27.9958,-329.714 0/0:33:33,0:33:1325:0:0:0,-9.93399,-119.514 dDocent_Contig_708 73 . A T 631.628 . AB=0.264151;ABP=54.2243;AC=2;AF=0.166667;AN=12;AO=30;CIGAR=1X;DP=394;DPB=394;DPRA=0.655462;EPP=68.1545;EPPR=793.426;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.533333;PAIREDR=0.692308;PAO=0;PQA=0;PQR=0;PRO=0;QA=1139;QR=13836;RO=364;RPL=13;RPP=4.16842;RPPR=3.60686;RPR=17;RUN=1;SAF=13;SAP=4.16842;SAR=17;SRF=177;SRP=3.60686;SRR=187;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:48,2:48:1770:2:81:0,-7.36577,-151.851 0/1:60:49,11:49:1872:11:399:-18.1844,0,-150.648 0/1:46:29,17:29:1093:17:659:-45.7919,0,-84.8138 0/0:89:89,0:89:3438:0:0:0,-26.7917,-309.509 0/0:76:76,0:76:2842:0:0:0,-22.8783,-255.938 0/0:73:73,0:73:2821:0:0:0,-21.9752,-254.04 dDocent_Contig_709 174 . G A 747.17 . AB=0.333333;ABP=24.725;AC=4;AF=0.333333;AN=12;AO=34;CIGAR=1X;DP=143;DPB=143;DPRA=0;EPP=76.8404;EPPR=239.701;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.676471;PAIREDR=0.743119;PAO=0;PQA=0;PQR=0;PRO=0;QA=1298;QR=4290;RO=109;RPL=34;RPP=76.8404;RPPR=239.701;RPR=0;RUN=1;SAF=0;SAP=76.8404;SAR=34;SRF=0;SRP=239.701;SRR=109;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:13,15:13:501:15:569:-43.1183,0,-36.9986 0/1:22:18,4:18:694:4:143:-6.59559,0,-56.1559 0/1:18:14,4:14:559:4:154:-8.81505,0,-45.2339 0/0:27:25,2:25:986:2:77:0,-0.818977,-81.7283 0/0:26:24,2:24:941:2:79:0,-0.329148,-77.4927 0/1:22:15,7:15:609:7:276:-18.5863,0,-48.5255 dDocent_Contig_710 48 . C A 501.596 . AB=0.127517;ABP=362.134;AC=3;AF=0.25;AN=12;AO=54;CIGAR=1X2M;DP=863;DPB=863;DPRA=2.07105;EPP=120.27;EPPR=1714.13;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2157;QR=30340;RO=788;RPL=0;RPP=120.27;RPPR=1714.13;RPR=54;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=788;SRP=1714.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:47:41,0,5:41:1530:0,5:0,201:-4.215,-16.5572,-141.793,0,-125.227,-123.721 0|0:76:72,4,0:72:2697:4,0:148,0:0,-9.19879,-229.252,-21.6742,-230.456,-242.561 0|1:178:141,10,27:141:5362:10,27:398,1082:-46.6935,-56.368,-493.082,0,-406.952,-431.597 0|1:73:62,4,6:62:2349:4,6:159,236:-0.780027,-6.33552,-197.747,0,-179.536,-190.823 0|0:166:159,0,6:159:6223:0,6:0,231:0,-47.8638,-559.525,-28.8994,-540.565,-538.759 0|0:323:313,0,10:313:12179:0,10:0,407:0,-94.2224,-1095.04,-60.2423,-1061.47,-1058.46 dDocent_Contig_711 15 . A C 30.2904 . AB=0.0850722;ABP=934.649;AC=1;AF=0.0833333;AN=12;AO=53;CIGAR=1X;DP=3196;DPB=3196;DPRA=1.21065;EPP=118.098;EPPR=6821.43;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2119;QR=125347;RO=3140;RPL=0;RPP=118.098;RPPR=6821.43;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=3140;SRP=6821.43;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:352:352,0:352:14053:0:0:0,-105.963,-1263.69 0/0:650:648,0:648:25885:0:0:0,-195.067,-2326.96 0/0:468:468,0:468:18696:0:0:0,-140.882,-1681.07 0/0:525:524,0:524:20831:0:0:0,-157.74,-1872.6 0/1:623:570,53:570:22704:53:2119:-3.3474,0,-1853.84 0/0:578:578,0:578:23178:0:0:0,-173.995,-2083.98 dDocent_Contig_713 49 . T A 673.354 . AB=0.154122;ABP=292.921;AC=3;AF=0.25;AN=12;AO=61;CIGAR=1X;DP=585;DPB=585;DPRA=0;EPP=57.1547;EPPR=1114.95;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994275;PAO=0;PQA=0;PQR=0;PRO=0;QA=2390;QR=20678;RO=524;RPL=11;RPP=57.1547;RPPR=1114.95;RPR=50;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=524;SRP=1140.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:73:58,15:58:2304:15:577:-30.2853,0,-185.548 0/1:120:108,12:108:4278:12:481:-7.51687,0,-348.862 0/0:81:75,6:75:2913:6:241:0,-2.31713,-240.204 0/1:86:70,16:70:2783:16:630:-31.1427,0,-224.693 0/0:121:114,7:114:4491:7:264:0,-12.3104,-380.022 0/0:104:99,5:99:3909:5:197:0,-13.2011,-333.695 dDocent_Contig_714 8 . T C 57.8705 . AB=0.106195;ABP=155.225;AC=1;AF=0.0833333;AN=12;AO=22;CIGAR=1X;DP=806;DPB=806;DPRA=0.94686;EPP=50.7827;EPPR=1705.44;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=826;QR=29993;RO=784;RPL=0;RPP=50.7827;RPPR=1705.44;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=784;SRP=1705.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:124:124,0:124:4737:0:0:0,-37.3277,-426.368 0/0:132:128,4:128:4902:4:152:0,-25.6868,-427.16 0/0:147:141,6:141:5424:6:232:0,-23.0025,-466.896 0/1:113:101,12:101:3868:12:442:-6.10581,0,-314.209 0/0:143:143,0:143:5424:0:0:0,-43.0473,-488.15 0/0:147:147,0:147:5638:0:0:0,-44.2514,-507.391 dDocent_Contig_715 25 . G A 152.071 . AB=0.147059;ABP=76.5849;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=551;DPB=551;DPRA=0.74813;EPP=33.4109;EPPR=1169.09;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.785714;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=552;QR=21330;RO=537;RPL=0;RPP=33.4109;RPPR=1169.09;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=537;SRP=1169.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:97:97,0:97:3895:0:0:0,-29.1999,-350.538 0/0:132:132,0:132:5296:0:0:0,-39.736,-476.478 0/0:68:68,0:68:2677:0:0:0,-20.47,-241.051 0/1:68:58,10:58:2292:10:396:-15.5259,0,-185.968 0/0:104:104,0:104:4087:0:0:0,-31.3071,-367.824 0/0:82:78,4:78:3083:4:156:0,-10.2703,-263.132 dDocent_Contig_716 40 . A C 1321.83 . AB=0.104571;ABP=2379.79;AC=4;AF=0.333333;AN=12;AO=227;CIGAR=1X;DP=2564;DPB=2564;DPRA=0;EPP=495.935;EPPR=5069.06;GTI=0;LEN=1;MEANALT=1.5;MQM=59.978;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998714;PAO=0;PQA=0;PQR=0;PRO=0;QA=9056;QR=89978;RO=2333;RPL=0;RPP=495.935;RPPR=5069.06;RPR=227;RUN=1;SAF=227;SAP=495.935;SAR=0;SRF=2333;SRP=5069.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:358:330,28:330:12668:28:1096:0,-8.84965,-1040.5 0/1:486:437,49:437:16773:49:1966:-30.8254,0,-1362.22 0/1:256:227,28:227:8841:28:1124:-24.2991,0,-718.129 0/0:456:438,16:438:16850:16:618:0,-81.1274,-1459.54 0/1:533:483,49:483:18773:49:1994:-19.0832,0,-1527.71 0/1:475:418,57:418:16073:57:2258:-60.3803,0,-1302.58 dDocent_Contig_717 43 . G A 8941.53 . AB=0.658879;ABP=96.8504;AC=5;AF=0.416666;AN=12;AO=291;CIGAR=1X1M;DP=616;DPB=616;DPRA=0;EPP=634.909;EPPR=678.338;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11512;QR=11933;RO=311;RPL=0;RPP=634.909;RPPR=678.338;RPR=291;RUN=1;SAF=291;SAP=634.909;SAR=0;SRF=311;SRP=678.338;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:42:33,0,9:33:1268:0,9:0,354:-19.5762,-29.5102,-133.589,0,-104.47,-101.761 0|1:98:52,0,45:52:1986:0,45:0,1749:-128.02,-143.673,-306.601,0,-162.904,-149.358 0|0:58:57,0,1:57:2177:0,1:0,38:0,-17.1587,-195.765,-13.6625,-192.648,-192.347 0|0:130:121,0,8:121:4625:0,8:0,313:0,-36.4246,-415.883,-10.7129,-390.154,-387.746 1|1:137:6,11,120:6:237:11,120:442,4763:-407.192,-372.575,-388.766,-16.9272,0,-0.303025 0|1:151:42,0,108:42:1640:0,108:0,4295:-341.255,-353.898,-488.715,0,-135.121,-102.61 dDocent_Contig_718 98 . N G 281.169 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=59.2222;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=283;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:131:-12.114,-1.20412,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:25:-2.49931,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:23:-2.29991,-0.30103,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 dDocent_Contig_719 98 . N A 1231.84 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=41;CIGAR=2X;DP=41;DPB=44.5;DPRA=0;EPP=92.0407;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=5;PQA=173;PQR=0;PRO=0;QA=1358;QR=0;RO=0;RPL=41;RPP=92.0407;RPPR=0;RPR=0;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:4:0,4:0:0:4:137:-12.6682,-1.20412,0 1|1:6:0,6:0:0:6:205:-18.4404,-1.80618,0 1|1:10:0,10:0:0:10:323:-29.0449,-3.0103,0 1|1:21:0,21:0:0:21:693:-62.3308,-6.32163,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_720 59 . T A 123196 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=3759;CIGAR=1X;DP=4023;DPB=4023;DPRA=0;EPP=8165.58;EPPR=569.765;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999202;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=147345;QR=10323;RO=261;RPL=3759;RPP=8165.58;RPPR=569.765;RPR=0;RUN=1;SAF=3759;SAP=8165.58;SAR=0;SRF=261;SRP=569.765;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:596:51,545:51:1980:545:21244:-1731.95,-1.02298,0 1/1:737:62,674:62:2447:674:26294:-2143.96,-1.5859,0 1/1:459:33,426:33:1323:426:16758:-1387.66,-18.8401,0 1/1:705:39,665:39:1544:665:26079:-2205.79,-72.8038,0 1/1:821:57,764:57:2284:764:30043:-2495.61,-41.425,0 1/1:705:19,685:19:745:685:26927:-2353.83,-144.964,0 dDocent_Contig_721 14 . T C 45.9446 . AB=0.119048;ABP=55.9529;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=523;DPB=523;DPRA=1.85586;EPP=39.9253;EPPR=1101.78;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=680;QR=20033;RO=506;RPL=0;RPP=39.9253;RPPR=1101.78;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=506;SRP=1101.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:76:76,0:76:3050:0:0:0,-22.8783,-274.58 0/0:123:117,6:117:4655:6:244:0,-14.6881,-396.528 0/0:88:86,2:86:3425:2:82:0,-18.711,-300.509 0/0:159:155,4:155:6063:4:163:0,-32.8053,-530.411 0/1:42:37,5:37:1475:5:191:-4.9132,0,-120.351 0/0:35:35,0:35:1365:0:0:0,-10.536,-123.103 dDocent_Contig_722 24 . G T 21828.1 . AB=0.0488599;ABP=545.73;AC=0;AF=0;AN=12;AO=15;CIGAR=1M1X5M1X2M;DP=1172;DPB=1162.2;DPRA=0;EPP=35.5824;EPPR=287.473;GTI=0;LEN=1;MEANALT=7;MQM=60;MQMR=60;NS=6;NUMALT=6;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=533;QR=4901;RO=131;RPL=0;RPP=35.5824;RPPR=287.473;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=131;SRP=287.473;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:130:13,37,0,9,0,0,69:13:497:37,0,9,0,0,69:1297,0,317,0,0,2337:-250.248,-148.656,-178.303,-254.162,-189.442,-294.945,-228.354,-163.634,-269.138,-266.428,-254.162,-189.442,-294.945,-269.138,-294.945,-254.162,-189.442,-294.945,-269.138,-294.945,-294.945,-64.7062,0,-105.493,-79.686,-105.493,-105.493,-84.7215 0|0:179:14,17,14,17,2,0,113:14:507:17,14,17,2,0,113:601,522,577,67,0,3882:-318.502,-273.789,-310.062,-279.981,-272.444,-317.157,-275.932,-268.396,-274.587,-312.205,-317.294,-309.757,-315.948,-311.9,-358.082,-322.716,-315.18,-321.371,-317.323,-358.684,-364.106,-7.5353,0,-6.18805,-2.14627,-43.5048,-48.9272,-14.9109 0|0:128:12,21,1,12,8,8,65:12:459:21,1,12,8,8,65:728,11,419,310,292,2276:-203.047,-147.495,-178.843,-205.973,-184.478,-243.341,-172.58,-151.086,-209.563,-206.637,-181.19,-159.695,-218.172,-184.78,-216.451,-182.805,-161.31,-219.788,-186.396,-195.005,-218.066,-21.489,0,-58.4764,-25.0834,-33.6896,-35.3068,-39.5945 0|0:202:44,20,0,6,8,15,106:44:1650:20,0,6,8,15,106:732,0,221,320,572,3687:-286.5,-239.931,-369.059,-299.746,-375.08,-434.894,-281.673,-357.008,-416.822,-415.016,-273.383,-348.718,-408.532,-390.46,-406.123,-252.818,-328.153,-387.967,-369.895,-361.605,-383.452,0,-75.336,-135.148,-117.077,-108.785,-88.2213,-103.239 0|0:245:8,0,0,34,120,0,80:8:299:0,0,34,120,0,80:0,0,1176,4653,0,2730:-576.872,-579.28,-603.764,-579.28,-603.764,-603.764,-483.727,-508.211,-508.211,-497.975,-197.018,-221.504,-221.504,-125.946,-185.38,-579.28,-603.764,-603.764,-508.211,-221.504,-603.764,-357.788,-382.271,-382.271,-286.722,0,-382.271,-358.189 0|0:288:40,3,0,19,171,0,52:40:1489:3,0,19,171,0,52:113,0,676,6593,0,1777:-551.641,-554.422,-675.384,-563.682,-676.287,-685.547,-508.595,-621.2,-630.46,-624.74,-22.3138,-134.928,-144.188,-89.0991,-92.712,-563.682,-676.287,-685.547,-630.46,-144.188,-685.547,-419.492,-532.096,-541.356,-486.269,0,-541.356,-525.702 dDocent_Contig_723 98 . N G 102.829 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=103;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:68:-6.45788,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_724 98 . N A 311.659 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=10;CIGAR=1X;DP=10;DPB=10;DPRA=0;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=330;QR=0;RO=0;RPL=10;RPP=24.725;RPPR=0;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:6:0,6:0:0:6:198:-18.1441,-1.80618,0 1/1:3:0,3:0:0:3:100:-9.33066,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 dDocent_Contig_725 24 . T G 4350.73 . AB=0.146281;ABP=1771.15;AC=4;AF=0.333333;AN=12;AO=303;CIGAR=1X4M1X;DP=2482;DPB=2482;DPRA=0;EPP=660.966;EPPR=4139.67;GTI=0;LEN=1;MEANALT=3.83333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11760;QR=74825;RO=1905;RPL=0;RPP=660.966;RPPR=4139.67;RPR=303;RUN=1;SAF=303;SAP=660.966;SAR=0;SRF=1905;SRP=4139.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:304:217,33,17,36:217:8505:33,17,36:1270,591,1372:-47.2045,-8.25594,-697.692,-64.5035,-659.597,-758.746,0,-595.102,-651.34,-688.531 0|1:409:219,88,4,97:219:8543:88,4,97:3420,154,3765:-243.378,-28.2805,-703.976,-296.663,-717.826,-997.644,0,-421.164,-689.545,-672.986 0|1:388:313,23,14,37:313:12269:23,14,37:860,532,1470:-26.8003,-50.6177,-1052.55,-77.3972,-1015.84,-1082.04,0,-938.46,-965.242,-997.73 0|1:526:371,73,13,68:371:14612:73,13,68:2822,474,2558:-120.095,0,-1180.07,-193.074,-1163.34,-1391.2,-22.2632,-992.534,-1185.6,-1203.83 0|0:416:379,0,0,33:379:14909:0,0,33:0,0,1320:0,-114.09,-1340.42,-114.09,-1340.42,-1340.42,-5.31706,-1231.69,-1231.69,-1221.75 0|0:439:406,0,0,32:406:15987:0,0,32:0,0,1275:0,-122.218,-1437.33,-122.218,-1437.33,-1437.33,-17.238,-1332.34,-1332.34,-1322.71 dDocent_Contig_726 98 . N G 2099.81 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=88;CIGAR=1X;DP=89;DPB=89;DPRA=0;EPP=194.1;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.8977;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2308;QR=0;RO=0;RPL=88;RPP=194.1;RPPR=0;RPR=0;RUN=1;SAF=88;SAP=194.1;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:9:0,9:0:0:9:187:-17.0345,-2.70927,0 1/1:16:0,16:0:0:16:466:-42.2196,-4.81648,0 1/1:12:0,12:0:0:12:313:-28.4249,-3.61236,0 1/1:14:0,13:0:0:13:324:-29.3213,-3.91339,0 1/1:17:0,17:0:0:17:459:-41.5702,-5.11751,0 1/1:21:0,21:0:0:21:559:-50.5652,-6.32163,0 dDocent_Contig_727 12 . A T 44442.5 . AB=0.0365585;ABP=5922.36;AC=0;AF=0;AN=12;AO=116;CIGAR=1X2M1X;DP=4044;DPB=4044;DPRA=0;EPP=254.901;EPPR=5097.28;GTI=0;LEN=1;MEANALT=2.8;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4602;QR=92216;RO=2346;RPL=0;RPP=254.901;RPPR=5097.28;RPR=116;RUN=1;SAF=116;SAP=254.901;SAR=0;SRF=2346;SRP=5097.28;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:599:354,9,224:354:13935:9,224:362,8975:-632.81,-709.541,-1853.12,0,-1116.47,-1078.87 0|0:606:248,30,318:248:9804:30,318:1195,12732:-974.136,-950.389,-1748.13,0,-708.37,-711.045 0|0:557:196,65,296:196:7640:65,296:2586,11922:-923.581,-769.668,-1377.99,0,-414.973,-538.786 0|0:568:288,7,273:288:11321:7,273:282,10972:-817.431,-880.884,-1809.92,0,-907.893,-848.955 0|0:871:641,0,230:641:25197:0,230:0,9173:-562.812,-755.772,-2828.2,0,-2072.83,-2003.59 0|0:843:619,5,219:619:24319:5,219:177,8785:-537.477,-709.402,-2708.03,0,-1985.76,-1934.25 dDocent_Contig_728 14 . C A 65297.9 . AB=0.686695;ABP=920.033;AC=6;AF=0.5;AN=12;AO=2080;CIGAR=1X;DP=3029;DPB=3029;DPRA=0;EPP=4510.99;EPPR=2057.22;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.996154;PAIREDR=0.996829;PAO=0;PQA=0;PQR=0;PRO=0;QA=82797;QR=37828;RO=946;RPL=0;RPP=4519.67;RPPR=2057.22;RPR=2080;RUN=1;SAF=2079;SAP=4510.99;SAR=1;SRF=946;SRP=2057.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:568:233,334:233:9320:334:13277:-1022.87,0,-667.134 0/1:610:206,403:206:8225:403:16045:-1259.07,0,-556.051 0/1:331:122,209:122:4887:209:8283:-645.373,0,-340.079 0/1:798:208,590:208:8304:590:23435:-1866.92,0,-506.67 0/1:373:32,340:32:1271:340:13622:-1112.89,0,-2.58347 0/1:349:145,204:145:5821:204:8135:-626.66,0,-418.614 dDocent_Contig_729 23 . G A 9545.6 . AB=0.0433996;ABP=1004.42;AC=0;AF=0;AN=12;AO=24;CIGAR=1M1X10M;DP=671;DPB=584.667;DPRA=0;EPP=55.1256;EPPR=496.262;GTI=0;LEN=1;MEANALT=4.6;MQM=60;MQMR=59.7741;NS=6;NUMALT=5;ODDS=0;PAIRED=1;PAIREDR=0.937238;PAO=0;PQA=0;PQR=0;PRO=0;QA=937;QR=9125;RO=239;RPL=0;RPP=55.1256;RPPR=521.992;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=236;SRP=496.262;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:80:14,6,3,53,3,0:14:532:6,3,53,3,0:236,116,2002,116,0:-159.852,-144.651,-186.473,-154.538,-178.751,-197.262,0,-24.2065,-34.0937,-27.6673,-154.538,-178.751,-188.637,-34.0938,-197.262,-164.066,-188.28,-198.165,-43.6219,-198.166,-207.694 0|0:119:38,0,1,66,7,5:38:1438:0,1,66,7,5:0,40,2445,277,195:-188.56,-199.999,-317.416,-196.704,-314.12,-313.819,0,-117.41,-114.114,-97.5418,-177.199,-294.617,-291.321,-94.6095,-292.509,-183.971,-301.388,-298.093,-101.382,-278.589,-299.883 0|0:136:22,0,27,81,4,0:22:863:0,27,81,4,0:0,961,3021,155,0:-247.992,-254.615,-325.592,-176.308,-247.285,-239.157,-7.30865,-78.2943,0,-53.9109,-241.88,-312.857,-234.55,-65.5592,-311.653,-254.615,-325.592,-247.285,-78.2943,-312.857,-325.592 0|0:130:28,0,8,84,9,0:28:1070:0,8,84,9,0:0,297,3112,350,0:-246.14,-254.569,-342.361,-230.264,-318.056,-315.648,0,-87.7898,-63.4876,-62.5032,-225.806,-313.599,-289.294,-59.0272,-310.889,-254.569,-342.361,-318.056,-87.7898,-313.599,-342.361 0|0:118:76,0,0,37,0,3:76:2865:0,0,37,0,3:0,0,1381,0,116:-90.2109,-113.089,-347.866,-113.089,-347.866,-347.866,0,-234.815,-234.815,-223.677,-113.089,-347.866,-347.866,-234.815,-347.866,-103.562,-338.34,-338.34,-225.289,-338.34,-337.437 0|0:88:61,0,0,14,1,10:61:2357:0,0,14,1,10:0,0,538,39,391:-25.8027,-44.1656,-237.751,-44.1656,-237.751,-237.751,0,-193.587,-193.587,-189.372,-40.9594,-234.545,-234.545,-190.381,-234.244,-12.0164,-205.606,-205.606,-161.441,-202.4,-202.595 dDocent_Contig_730 70 . A T 4596.3 . AB=0.208098;ABP=788.993;AC=6;AF=0.5;AN=12;AO=221;CIGAR=1X;DP=1062;DPB=1062;DPRA=0;EPP=482.906;EPPR=1827.05;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.950226;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8684;QR=32142;RO=840;RPL=221;RPP=482.906;RPPR=1827.05;RPR=0;RUN=1;SAF=221;SAP=482.906;SAR=0;SRF=840;SRP=1827.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:155:127,28:127:4760:28:1075:-50.3955,0,-381.783 0/1:165:116,49:116:4364:49:1862:-118.155,0,-343.16 0/1:266:224,42:224:8805:42:1691:-72.3406,0,-711.888 0/1:159:119,40:119:4674:40:1602:-96.5536,0,-372.728 0/1:172:155,16:155:5832:16:608:-3.48283,0,-473.301 0/1:145:99,46:99:3707:46:1846:-122.699,0,-290.089 dDocent_Contig_731 15 . C T 178.179 . AB=0.13125;ABP=191.983;AC=3;AF=0.25;AN=12;AO=29;CIGAR=1X;DP=376;DPB=376;DPRA=0;EPP=65.983;EPPR=756.511;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.724138;PAIREDR=0.755043;PAO=0;PQA=0;PQR=0;PRO=0;QA=1036;QR=13914;RO=347;RPL=0;RPP=65.983;RPPR=756.511;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=347;SRP=756.511;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:32,3:32:1265:3:116:-0.281655,0,-103.587 0/1:68:56,12:56:2237:12:421:-17.7484,0,-181.021 0/0:54:51,3:51:2059:3:112:0,-5.8104,-175.043 0/1:57:51,6:51:2028:6:196:-0.797864,0,-165.537 0/0:73:70,3:70:2817:3:116:0,-11.1578,-242.808 0/0:89:87,2:87:3508:2:75:0,-19.6716,-308.619 dDocent_Contig_732 19 . T G 222.246 . AB=0.104895;ABP=390.808;AC=1;AF=0.0833333;AN=12;AO=87;CIGAR=1X;DP=1868;DPB=1868;DPRA=0.930322;EPP=191.928;EPPR=3870.4;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3453;QR=69084;RO=1781;RPL=0;RPP=191.928;RPPR=3870.4;RPR=87;RUN=1;SAF=87;SAP=191.928;SAR=0;SRF=1781;SRP=3870.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:210:195,15:195:7616:15:573:0,-11.3166,-633.254 0/1:286:256,30:256:9927:30:1204:-22.5433,0,-806.863 0/0:377:358,19:358:13927:19:758:0,-44.9463,-1184.04 0/0:342:319,23:319:12377:23:918:0,-20.0257,-1030.32 0/0:326:326,0:326:12589:0:0:0,-98.1358,-1132.34 0/0:327:327,0:327:12648:0:0:0,-98.4368,-1137.63 dDocent_Contig_733 14 . A C 84.3073 . AB=0.11236;ABP=119.172;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1X;DP=583;DPB=583;DPRA=0.740299;EPP=44.2683;EPPR=1227.72;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.894737;PAIREDR=0.893617;PAO=0;PQA=0;PQR=0;PRO=0;QA=738;QR=22667;RO=564;RPL=0;RPP=44.2683;RPPR=1227.72;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=564;SRP=1227.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:72:68,4:68:2690:4:152:0,-7.62861,-228.178 0/0:87:82,5:82:3312:5:195:0,-8.2701,-280.205 0/1:89:79,10:79:3180:10:391:-8.74949,0,-259.465 0/0:94:94,0:94:3778:0:0:0,-28.2968,-340.019 0/0:129:129,0:129:5204:0:0:0,-38.8329,-468.199 0/0:112:112,0:112:4503:0:0:0,-33.7154,-405.194 dDocent_Contig_734 26 . A G 1727.39 . AB=0.284519;ABP=99.4001;AC=2;AF=0.166667;AN=12;AO=68;CIGAR=1X;DP=868;DPB=868;DPRA=0.759936;EPP=150.67;EPPR=1740.19;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99875;PAO=0;PQA=0;PQR=0;PRO=0;QA=2722;QR=31723;RO=800;RPL=0;RPP=150.67;RPPR=1740.19;RPR=68;RUN=1;SAF=68;SAP=150.67;SAR=0;SRF=800;SRP=1740.19;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:180:180,0:180:7182:0:0:0,-54.1854,-646.05 0/0:187:187,0:187:7423:0:0:0,-56.2926,-667.729 0/0:120:120,0:120:4739:0:0:0,-36.1236,-426.425 0/0:142:142,0:142:5615:0:0:0,-42.7463,-505.204 0/1:114:72,42:72:2871:42:1679:-117.019,0,-224.182 0/1:125:99,26:99:3893:26:1043:-56.5341,0,-312.762 dDocent_Contig_735 12 . T C 7407.61 . AB=0.312222;ABP=278.652;AC=5;AF=0.416667;AN=12;AO=289;CIGAR=1X;DP=1016;DPB=1016;DPRA=0;EPP=630.566;EPPR=1577.33;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997241;PAO=0;PQA=0;PQR=0;PRO=0;QA=11591;QR=29178;RO=725;RPL=0;RPP=630.566;RPPR=1577.33;RPR=289;RUN=1;SAF=289;SAP=630.566;SAR=0;SRF=725;SRP=1577.33;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:126:91,35:91:3672:35:1389:-87.332,0,-292.555 0/1:220:167,53:167:6694:53:2127:-125.376,0,-535.923 0/1:281:170,109:170:6849:109:4367:-308.611,0,-531.703 0/1:198:132,66:132:5299:66:2650:-179.017,0,-417.138 0/1:75:57,18:57:2297:18:732:-43.6258,0,-184.307 0/0:116:108,8:108:4367:8:326:0,-5.20961,-363.239 dDocent_Contig_736 34 . T A 4624.67 . AB=0.15304;ABP=1998.05;AC=5;AF=0.416667;AN=12;AO=336;CIGAR=1X;DP=2457;DPB=2457;DPRA=0;EPP=732.625;EPPR=4606.53;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999528;PAO=0;PQA=0;PQR=0;PRO=0;QA=13259;QR=84673;RO=2120;RPL=0;RPP=732.625;RPPR=4606.53;RPR=336;RUN=1;SAF=336;SAP=732.625;SAR=0;SRF=2120;SRP=4606.53;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:370:300,70:300:11892:70:2756:-136.779,0,-958.072 0/1:451:377,73:377:15130:73:2904:-125.595,0,-1224.63 0/1:203:159,44:159:6387:44:1714:-93.3703,0,-513.432 0/1:366:325,41:325:12992:41:1617:-35.5918,0,-1058.13 0/0:549:505,44:505:20192:44:1711:0,-11.0475,-1661.32 0/1:518:454,64:454:18080:64:2557:-74.3321,0,-1469.78 dDocent_Contig_737 37 . T G 16610 . AB=0.244993;ABP=1582.28;AC=6;AF=0.5;AN=12;AO=685;CIGAR=1X3M;DP=2796;DPB=2796;DPRA=0;EPP=1490.47;EPPR=4174.41;GTI=0;LEN=1;MEANALT=4.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.998438;PAO=0;PQA=0;PQR=0;PRO=0;QA=27242;QR=72512;RO=1921;RPL=0;RPP=1490.47;RPPR=4174.41;RPR=685;RUN=1;SAF=685;SAP=1490.47;SAR=0;SRF=1921;SRP=4174.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:387:261,61,63:261:9867:61,63:2338,2536:-130.448,-17.1412,-807.549,0,-616.904,-789.821 0|1:469:318,59,89:318:11952:59,89:2298,3555:-197.063,-103.926,-1065.3,0,-790.279,-952.355 0|1:290:213,34,40:213:8085:34,40:1307,1585:-66.341,-23.1766,-675.892,0,-555.674,-650.919 0|1:483:375,19,85:375:14072:19,85:743,3336:-161.454,-213.252,-1360.18,0,-1091.58,-1127.08 0|1:584:354,0,228:354:13365:0,228:0,9035:-637.19,-743.755,-1839.12,0,-1095.52,-1026.89 0|1:583:400,0,180:400:15171:0,180:0,7195:-472.504,-592.916,-1836.83,0,-1244.22,-1190.03 dDocent_Contig_738 91 . G C 3701.03 . AB=0;ABP=0;AC=8;AF=0.666667;AN=12;AO=668;CIGAR=1X;DP=1278;DPB=1278;DPRA=0.783077;EPP=1453.55;EPPR=1310.25;GTI=0;LEN=1;MEANALT=1.6;MQM=7.15719;MQMR=6.9967;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99835;PAO=0;PQA=0;PQR=0;PRO=0;QA=21856;QR=20473;RO=606;RPL=668;RPP=1453.55;RPPR=1318.92;RPR=0;RUN=1;SAF=668;SAP=1453.55;SAR=0;SRF=605;SRP=1310.25;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:185:22,162:22:712:162:5242:-90.5093,-41.8701,0 1/1:198:13,184:13:442:184:6063:-112.172,-51.1222,0 1/1:164:20,144:20:672:144:4726:-77.651,-36.7205,0 1/1:190:24,166:24:822:166:5451:-88.993,-42.0234,0 0/0:260:259,0:259:8727:0:0:0,-77.9668,-162.815 0/0:281:268,12:268:9098:12:374:0,-76.7752,-160.867 dDocent_Contig_739 106 . N C 884.226 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=32;CIGAR=2X;DP=32;DPB=32;DPRA=0;EPP=72.4974;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=963;QR=0;RO=0;RPL=0;RPP=72.4974;RPPR=0;RPR=32;RUN=1;SAF=0;SAP=72.4974;SAR=32;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:53:-5.03414,-0.60206,0 1|1:9:0,9:0:0:9:266:-24.2308,-2.70927,0 1|1:7:0,7:0:0:7:202:-18.4654,-2.10721,0 1|1:14:0,14:0:0:14:442:-40.0858,-4.21442,0 .:.:.:.:.:.:.:. dDocent_Contig_740 40 . C A 105661 . AB=0.844828;ABP=602.037;AC=11;AF=0.916667;AN=12;AO=3122;CIGAR=1X10M;DP=3445;DPB=3524.27;DPRA=0;EPP=6782.35;EPPR=363.475;GTI=0;LEN=1;MEANALT=7.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.22045e-16;PAIRED=0.999359;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=123805;QR=6393;RO=166;RPL=0;RPP=6782.35;RPPR=363.475;RPR=3122;RUN=1;SAF=3122;SAP=6782.35;SAR=0;SRF=166;SRP=363.475;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:412:14,31,362:14:552:31,362:1222,14239:-1230.48,-1134.16,-1170.24,-63.5538,-8.42438,0 0|1:580:50,31,490:50:1928:31,490:1221,19405:-1581.98,-1496.58,-1645.56,0,-57.8576,-10.8102 1|1:429:23,25,377:23:881:25,377:988,14948:-1264.61,-1190.23,-1254.99,-41.1964,-32.1752,0 1|1:492:19,12,444:19:721:12,444:469,17699:-1526.28,-1493.44,-1548.95,-74.5397,-95.0962,0 1|1:883:48,0,822:48:1856:0,822:0,32617:-2765.38,-2779.83,-2932.27,-94.954,-247.447,0 1|1:649:12,0,627:12:455:0,627:0,24897:-2197.35,-2200.96,-2238.26,-151.418,-188.746,0 dDocent_Contig_741 13 . G T 95.1917 . AB=0.00625;ABP=341.814;AC=0;AF=0;AN=12;AO=101;CIGAR=1M5I2M1I1M1X4M;DP=1581;DPB=1656.33;DPRA=0;EPP=222.329;EPPR=2910.61;GTI=0;LEN=1;MEANALT=6.66667;MQM=9.11881;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0.998506;PAO=0;PQA=0;PQR=0;PRO=0;QA=921;QR=51427;RO=1339;RPL=0;RPP=222.329;RPPR=2910.61;RPR=101;RUN=1;SAF=101;SAP=222.329;SAR=0;SRF=1339;SRP=2910.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:227:207,9,3,2:207:7957:9,3,2:81,117,81:0,-60.0151,-710.663,-52.8278,-703.928,-705.383,-59.4966,-710.562,-703.475,-712.318 0|0:265:223,13,11,14:223:8556:13,11,14:117,440,551:0,-63.7658,-762.235,-31.6277,-730.714,-730.812,-47.4607,-746.486,-714.459,-745.68 0|0:160:137,1,16,4:137:5247:1,16,4:9,634,161:-9.83793,-50.828,-481.153,0,-430.492,-425.937,-44.864,-475.216,-424.516,-474.273 0|0:253:221,10,7,11:221:8513:10,7,11:90,276,424:0,-63.9499,-760.057,-44.6403,-741.234,-741.748,-51.0998,-747.649,-728.437,-746.959 0|0:357:294,35,10,11:294:11282:35,10,11:323,402,439:0,-78.7018,-994.326,-56.0489,-972.454,-979.315,-73.3886,-989.763,-967.225,-996.322 0|0:319:257,33,2,18:257:9872:33,2,18:301,82,723:0,-68.3838,-869.016,-70.7523,-872.347,-880.749,-54,-855.625,-858.022,-859.207 dDocent_Contig_742 51 . G A 790.728 . AB=0.298077;ABP=39.8418;AC=2;AF=0.166667;AN=12;AO=31;CIGAR=1X;DP=1027;DPB=1027;DPRA=0.225352;EPP=70.3259;EPPR=2165.8;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998996;PAO=0;PQA=0;PQR=0;PRO=0;QA=1228;QR=38765;RO=996;RPL=31;RPP=70.3259;RPPR=2165.8;RPR=0;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=996;SRP=2165.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:214:214,0:214:8385:0:0:0,-64.4204,-754.242 0/0:305:305,0:305:11902:0:0:0,-91.8141,-1070.44 0/0:199:199,0:199:7688:0:0:0,-59.905,-691.578 0/0:205:205,0:205:7977:0:0:0,-61.7111,-717.577 0/1:24:16,8:16:610:8:318:-21.7607,0,-47.9931 0/1:80:57,23:57:2203:23:910:-58.1257,0,-174.378 dDocent_Contig_743 7 . T C 239.13 . AB=0.168675;ABP=82.1513;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=308;DPB=308;DPRA=1.5;EPP=35.5824;EPPR=637.08;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.6;PAIREDR=0.575342;PAO=0;PQA=0;PQR=0;PRO=0;QA=580;QR=11136;RO=292;RPL=0;RPP=35.5824;RPPR=637.08;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=292;SRP=637.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1555:0:0:0,-12.3422,-140.219 0/1:83:68,14:68:2598:14:541:-24.2318,0,-209.227 0/0:39:39,0:39:1506:0:0:0,-11.7402,-135.814 0/0:49:48,1:48:1835:1:39:0,-10.8539,-161.502 0/0:52:52,0:52:1959:0:0:0,-15.6536,-176.546 0/0:44:44,0:44:1683:0:0:0,-13.2453,-151.733 dDocent_Contig_744 76 . G A 49655.6 . AB=0.511176;ABP=6.7475;AC=6;AF=0.5;AN=12;AO=1761;CIGAR=1X;DP=3445;DPB=3445;DPRA=0;EPP=3826.97;EPPR=3657.6;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=66765;QR=61845;RO=1683;RPL=1761;RPP=3826.97;RPPR=3657.6;RPR=0;RUN=1;SAF=1761;SAP=3826.97;SAR=0;SRF=1683;SRP=3657.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:575:183,392:183:6508:392:14752:-1153.95,0,-412.675 0/1:739:297,442:297:10482:442:16653:-1275.53,0,-720.784 0/1:416:162,254:162:6041:254:9743:-751.311,0,-418.413 0/1:665:261,403:261:9633:403:15334:-1179.36,0,-666.728 0/1:538:390,148:390:14657:148:5628:-344.536,0,-1156.53 0/1:512:390,122:390:14524:122:4655:-264.869,0,-1152.44 dDocent_Contig_745 98 . N A 106.777 . AB=0;ABP=0;AC=4;AF=0.666667;AN=6;AO=3;CIGAR=1X;DP=4;DPB=4;DPRA=1.5;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=104;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:1:0,0:0:0:0:0:0,0,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:2:0,2:0:0:2:70:-6.64733,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_746 22 . C T 1826.33 . AB=0.117105;ABP=1938.62;AC=2;AF=0.166667;AN=12;AO=180;CIGAR=1X;DP=4133;DPB=4133;DPRA=1.23074;EPP=393.875;EPPR=8575.98;GTI=0;LEN=1;MEANALT=2.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.991135;PAO=0;PQA=0;PQR=0;PRO=0;QA=7200;QR=158653;RO=3948;RPL=0;RPP=393.875;RPPR=8575.98;RPR=180;RUN=1;SAF=180;SAP=393.875;SAR=0;SRF=3948;SRP=8575.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:611:611,0:611:24569:0:0:0,-183.929,-2208.94 0/0:822:819,1:819:32966:1:40:0,-243.234,-2959.79 0/0:597:595,1:595:23978:1:40:0,-175.823,-2151.77 0/0:583:583,0:583:23497:0:0:0,-175.5,-2112.56 0/1:837:753,83:753:30111:83:3337:-48.6113,0,-2455.42 0/1:683:587,95:587:23532:95:3783:-134.835,0,-1910.09 dDocent_Contig_747 37 . C G 188.966 . AB=0.368421;ABP=5.8675;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=194;DPB=194;DPRA=1.37391;EPP=22.5536;EPPR=402.561;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994565;PAO=0;PQA=0;PQR=0;PRO=0;QA=351;QR=7199;RO=184;RPL=0;RPP=22.5536;RPPR=402.561;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=184;SRP=402.561;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:45:44,0:44:1699:0:0:0,-13.2453,-152.777 0/0:34:34,0:34:1345:0:0:0,-10.235,-121.322 0/0:60:58,2:58:2263:2:78:0,-10.6583,-196.463 0/0:20:20,0:20:784:0:0:0,-6.0206,-70.8844 0/0:16:16,0:16:636:0:0:0,-4.81648,-57.5751 0/1:19:12,7:12:472:7:273:-19.2154,0,-37.1113 dDocent_Contig_748 46 . A G 87729.4 . AB=0.564781;ABP=191.789;AC=6;AF=0.5;AN=12;AO=2925;CIGAR=1X;DP=5179;DPB=5179;DPRA=0;EPP=1963.37;EPPR=4393.7;GTI=0;LEN=1;MEANALT=1.5;MQM=57.3607;MQMR=59.9987;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.0551601;PAO=0;PQA=0;PQR=0;PRO=0;QA=115409;QR=87636;RO=2248;RPL=29;RPP=6105.17;RPPR=4534.85;RPR=2896;RUN=1;SAF=2304;SAP=2105.8;SAR=621;SRF=2229;SRP=4720.84;SRR=19;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:710:239,471:239:9308:471:18504:-1439.34,0,-623.55 0/1:1116:432,682:432:16783:682:26969:-2078.28,0,-1173.64 0/1:687:305,382:305:11899:382:14998:-1136.47,0,-863.413 0/1:987:462,522:462:18068:522:20721:-1561.28,0,-1328.23 0/1:660:341,318:341:13286:318:12561:-928.038,0,-996.148 0/1:1019:469,550:469:18292:550:21656:-1633.54,0,-1338.24 dDocent_Contig_749 14 . G T 2482.82 . AB=0.0598958;ABP=1941.12;AC=1;AF=0.0833333;AN=12;AO=69;CIGAR=1X1M1X;DP=1383;DPB=1383;DPRA=0;EPP=152.842;EPPR=2456.77;GTI=0;LEN=1;MEANALT=2.8;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.99469;PAO=0;PQA=0;PQR=0;PRO=0;QA=2721;QR=43567;RO=1130;RPL=0;RPP=152.842;RPPR=2456.77;RPR=69;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=1130;SRP=2456.77;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:193:152,8,26:152:5824:8,26:307,1039:-39.8297,-60.393,-535.889,0,-452.716,-470.085 0|0:290:235,11,36:235:9001:11,36:440,1390:-43.395,-77.8914,-813.194,0,-702.361,-727.768 0|1:159:106,35,17:106:4118:35,17:1376,587:-81.2966,0,-327.851,-65.5595,-290.731,-398.791 0|0:246:207,9,29:207:8028:9,29:359,1147:-32.0886,-64.834,-721.64,0,-629.96,-650.796 0|0:264:222,6,36:222:8565:6,36:239,1412:-49.28,-96.4282,-797.914,0,-683.606,-692.449 0|0:231:208,0,21:208:8031:0,21:0,838:-6.38884,-69.0031,-728.494,0,-659.48,-653.158 dDocent_Contig_750 98 . N A 270.683 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=280;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:44:-4.17958,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:5:0,5:0:0:5:166:-15.2676,-1.50515,0 dDocent_Contig_751 98 . N T 280.031 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=11;CIGAR=1X;DP=11;DPB=11;DPRA=0;EPP=26.8965;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=290;QR=0;RO=0;RPL=11;RPP=26.8965;RPPR=0;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:10:-0.999996,-0.30103,0 1/1:2:0,2:0:0:2:37:-3.51467,-0.60206,0 1/1:3:0,3:0:0:3:105:-9.79616,-0.90309,0 1/1:3:0,3:0:0:3:83:-7.74436,-0.90309,0 1/1:2:0,2:0:0:2:55:-5.22366,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_752 13 . G A 76.0202 . AB=0.151515;ABP=37.8197;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=241;DPB=241;DPRA=0.63388;EPP=16.0391;EPPR=511.135;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.991453;PAO=0;PQA=0;PQR=0;PRO=0;QA=232;QR=9290;RO=234;RPL=0;RPP=16.0391;RPPR=511.135;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=234;SRP=511.135;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:28,5:28:1125:5:191:-7.61975,0,-91.5981 0/0:51:51,0:51:2053:0:0:0,-15.3525,-184.947 0/0:25:23,1:23:892:1:41:0,-3.53466,-76.4929 0/0:35:35,0:35:1400:0:0:0,-10.536,-126.251 0/0:48:48,0:48:1919:0:0:0,-14.4494,-172.909 0/0:49:49,0:49:1901:0:0:0,-14.7505,-171.285 dDocent_Contig_753 18 . C A 24734.7 . AB=0.354037;ABP=479.709;AC=6;AF=0.5;AN=12;AO=912;CIGAR=1X;DP=2576;DPB=2576;DPRA=0;EPP=1983.39;EPPR=3612;GTI=0;LEN=1;MEANALT=1.33333;MQM=59.9989;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998904;PAIREDR=0.999398;PAO=0;PQA=0;PQR=0;PRO=0;QA=36159;QR=66319;RO=1662;RPL=0;RPP=1983.39;RPPR=3612;RPR=912;RUN=1;SAF=912;SAP=1983.39;SAR=0;SRF=1662;SRP=3612;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:331:216,114:216:8587:114:4507:-305.915,0,-672.691 0/1:533:410,123:410:16415:123:4862:-277.036,0,-1315.58 0/1:385:286,98:286:11418:98:3865:-231.852,0,-910.822 0/1:407:309,98:309:12286:98:3863:-225.167,0,-982.371 0/1:476:227,249:227:9057:249:9870:-744.415,0,-671.298 0/1:444:214,230:214:8556:230:9192:-693.078,0,-635.905 dDocent_Contig_754 17 . G A 205.519 . AB=0.142857;ABP=119.339;AC=1;AF=0.0833333;AN=12;AO=24;CIGAR=1X;DP=776;DPB=776;DPRA=1.00775;EPP=55.1256;EPPR=1635.96;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=934;QR=29085;RO=752;RPL=0;RPP=55.1256;RPPR=1635.96;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=752;SRP=1635.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:105:90,15:90:3429:15:576:-20.5696,0,-277.095 0/0:171:171,0:171:6638:0:0:0,-51.4761,-597.249 0/0:129:129,0:129:5057:0:0:0,-38.8329,-455.046 0/0:155:146,9:146:5677:9:358:0,-14.0765,-478.227 0/0:132:132,0:132:5053:0:0:0,-39.736,-454.716 0/0:84:84,0:84:3231:0:0:0,-25.2865,-290.891 dDocent_Contig_755 13 . C A 360.786 . AB=0.108051;ABP=632.829;AC=2;AF=0.166667;AN=12;AO=78;CIGAR=1X;DP=2904;DPB=2904;DPRA=1.01;EPP=172.385;EPPR=6137.42;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3015;QR=113184;RO=2825;RPL=0;RPP=172.385;RPPR=6137.42;RPR=78;RUN=1;SAF=78;SAP=172.385;SAR=0;SRF=2825;SRP=6137.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:207:185,22:185:7402:22:873:-16.5692,0,-603.492 0/0:480:480,0:480:19219:0:0:0,-144.494,-1728.09 0/1:265:236,29:236:9482:29:1109:-20.323,0,-772.994 0/0:412:388,24:388:15478:24:927:0,-40.2929,-1308.04 0/0:813:812,1:812:32547:1:27:0,-242.038,-2923.47 0/0:727:724,2:724:29056:2:79:0,-211.309,-2604.9 dDocent_Contig_756 20 . T C 4428.24 . AB=0.143803;ABP=2332.71;AC=6;AF=0.5;AN=12;AO=304;CIGAR=1X1M2X;DP=2114;DPB=2114;DPRA=0;EPP=663.138;EPPR=3913.83;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.996711;PAIREDR=0.997224;PAO=0;PQA=0;PQR=0;PRO=0;QA=12014;QR=71383;RO=1801;RPL=0;RPP=663.138;RPPR=3913.83;RPR=304;RUN=1;SAF=304;SAP=663.138;SAR=0;SRF=1801;SRP=3913.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:274:244,29:244:9680:29:1135:-19.8477,0,-788.053 0|1:363:318,44:318:12607:44:1744:-47.8017,0,-1024.41 0|1:382:338,42:338:13448:42:1666:-35.4297,0,-1094.63 0|1:335:292,43:292:11572:43:1708:-53.0982,0,-939.89 0|1:420:346,72:346:13682:72:2852:-130.568,0,-1104.21 0|1:340:263,74:263:10394:74:2909:-160.076,0,-832.999 dDocent_Contig_758 10 . T C 222.424 . AB=0.0949821;ABP=798.065;AC=1;AF=0.0833333;AN=12;AO=81;CIGAR=2X;DP=3296;DPB=3296;DPRA=1.81461;EPP=178.9;EPPR=6973.44;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997819;PAO=0;PQA=0;PQR=0;PRO=0;QA=3237;QR=128152;RO=3210;RPL=0;RPP=178.9;RPPR=6973.44;RPR=81;RUN=1;SAF=81;SAP=178.9;SAR=0;SRF=3210;SRP=6973.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:385:384,0:384:15343:0:0:0,-115.596,-1379.5 0|1:558:504,53:504:20028:53:2116:-22.5612,0,-1632.85 0|0:327:327,0:327:13080:0:0:0,-98.4368,-1176.25 0|0:514:504,8:504:20121:8:322:0,-125.084,-1779.91 0|0:873:857,15:857:34255:15:599:0,-208.601,-3025.59 0|0:639:634,5:634:25325:5:200:0,-173.978,-2258.67 dDocent_Contig_759 46 . G C 36385.8 . AB=0.66;ABP=292.077;AC=7;AF=0.583333;AN=12;AO=1142;CIGAR=1X;DP=1601;DPB=1601;DPRA=0;EPP=2482.83;EPPR=999.716;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.996497;PAIREDR=0.997821;PAO=0;PQA=0;PQR=0;PRO=0;QA=45499;QR=18000;RO=459;RPL=0;RPP=2482.83;RPPR=999.716;RPR=1142;RUN=1;SAF=1142;SAP=2482.83;SAR=0;SRF=459;SRP=999.716;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:220:55,165:55:2125:165:6576:-525.326,0,-125.208 0/1:357:121,236:121:4732:236:9381:-736.249,0,-318.34 0/1:282:96,186:96:3798:186:7455:-585.665,0,-256.944 0/1:262:117,145:117:4607:145:5800:-442.927,0,-335.699 1/1:301:17,284:17:657:284:11278:-954.81,-31.1579,0 0/1:179:53,126:53:2081:126:5009:-396.809,0,-133.602 dDocent_Contig_760 22 . T C 3424.74 . AB=0.0630631;ABP=187.077;AC=5;AF=0.416667;AN=12;AO=7;CIGAR=5M2X1M2X1M1X;DP=746;DPB=745.167;DPRA=1.42308;EPP=18.2106;EPPR=1156.06;GTI=0;LEN=1;MEANALT=5;MQM=54.5714;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.99435;PAO=0;PQA=0;PQR=0;PRO=0;QA=269;QR=20435;RO=531;RPL=0;RPP=18.2106;RPPR=1156.06;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=531;SRP=1156.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:78:69,0,6,0,1:69:2643:0,6,0,1:0,240,0,41:0,-20.7711,-237.652,-1.0325,-217.918,-216.112,-20.7711,-237.652,-217.918,-237.652,-17.3853,-234.267,-214.534,-234.267,-233.966 0|1:150:99,0,39,0,8:99:3821:0,39,0,8:0,1534,0,310:-90.8667,-120.669,-434.453,0,-313.778,-302.037,-120.669,-434.453,-313.778,-434.453,-95.2036,-408.989,-288.314,-408.989,-406.581 0|1:113:85,0,27,0,1:85:3294:0,27,0,1:0,1072,0,41:-62.6292,-88.2167,-358.817,0,-270.585,-262.457,-88.2167,-358.817,-270.585,-358.817,-84.8322,-355.432,-267.201,-355.432,-355.131 0|1:193:142,0,45,0,1:142:5476:0,45,0,1:0,1749,0,41:-92.1961,-134.942,-584.611,0,-449.655,-436.109,-134.942,-584.611,-449.655,-584.611,-131.557,-581.226,-446.271,-581.226,-580.925 0|1:111:64,8,24,7,6:64:2430:8,24,7,6:308,941,269,237:-53.7797,-48.1099,-244.954,0,-174.313,-192.024,-51.023,-225.341,-177.227,-248.168,-53.5408,-227.859,-179.745,-230.772,-250.988 0|1:101:72,2,21,0,0:72:2771:2,21,0,0:80,826,0,0:-46.202,-61.3946,-288.292,0,-221.052,-221.212,-67.8762,-288.894,-227.533,-295.375,-67.8762,-288.894,-227.533,-295.375,-295.375 dDocent_Contig_761 20 . T A 76.2021 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=75;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:2:0,2:0:0:2:41:-3.89485,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_762 7 . A G 1042.77 . AB=0.302439;ABP=72.508;AC=6;AF=0.5;AN=12;AO=62;CIGAR=1X;DP=205;DPB=205;DPRA=0;EPP=137.642;EPPR=307.016;GTI=0;LEN=1;MEANALT=1.5;MQM=38;MQMR=17.6643;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.75;PAO=0;PQA=0;PQR=0;PRO=0;QA=2023;QR=3249;RO=140;RPL=0;RPP=137.642;RPPR=307.016;RPR=62;RUN=1;SAF=62;SAP=137.642;SAR=0;SRF=140;SRP=307.016;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:18,7:18:356:7:233:-13.0869,0,-13.4571 0/1:41:25,15:25:544:15:519:-30.5319,0,-14.9543 0/1:23:17,6:17:421:6:180:-9.03605,0,-14.2838 0/1:46:33,12:33:819:12:398:-21.0109,0,-29.4764 0/1:25:22,3:22:539:3:86:-0.274688,0,-22.2246 0/1:45:25,19:25:570:19:607:-33.7916,0,-16.9096 dDocent_Contig_763 98 . N G 1529.78 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=50;CIGAR=1X;DP=50;DPB=50;DPRA=0;EPP=111.584;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1669;QR=0;RO=0;RPL=50;RPP=111.584;RPPR=0;RPR=0;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:103:-9.60997,-0.90309,0 1/1:19:0,19:0:0:19:613:-55.4729,-5.71957,0 1/1:7:0,7:0:0:7:241:-22.0264,-2.10721,0 1/1:11:0,11:0:0:11:377:-34.2604,-3.31133,0 1/1:9:0,9:0:0:9:300:-27.3246,-2.70927,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_764 33 . G A 968.113 . AB=0.125915;ABP=833.196;AC=4;AF=0.333333;AN=12;AO=101;CIGAR=1X;DP=1045;DPB=1045;DPRA=0;EPP=222.329;EPPR=2052.88;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994703;PAO=0;PQA=0;PQR=0;PRO=0;QA=3932;QR=37236;RO=944;RPL=0;RPP=222.329;RPPR=2052.88;RPR=101;RUN=1;SAF=101;SAP=222.329;SAR=0;SRF=944;SRP=2052.88;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:159:145,14:145:5777:14:520:0,-0.73948,-472.618 0/1:221:199,22:199:7903:22:837:-9.11179,0,-644.344 0/1:88:79,9:79:3105:9:347:-5.09479,0,-253.048 0/1:151:118,33:118:4622:33:1318:-73.4327,0,-370.473 0/1:223:201,22:201:7838:22:871:-11.5752,0,-637.917 0/0:203:202,1:202:7991:1:39:0,-57.2125,-714.898 dDocent_Contig_765 34 . A G 136.832 . AB=0.214286;ABP=22.8638;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=242;DPB=242;DPRA=0.890625;EPP=29.068;EPPR=502.449;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=489;QR=9199;RO=230;RPL=0;RPP=29.068;RPPR=502.449;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=230;SRP=502.449;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:38,0:38:1522:0:0:0,-11.4391,-137.22 0/0:62:62,0:62:2490:0:0:0,-18.6639,-224.238 0/0:45:42,3:42:1694:3:122:0,-2.17386,-141.308 0/0:41:38,3:38:1519:3:122:0,-0.969737,-125.58 0/0:28:28,0:28:1106:0:0:0,-8.42884,-99.8249 0/1:28:22,6:22:868:6:245:-14.0006,0,-70.0053 dDocent_Contig_766 23 . C T 302.898 . AB=0.147287;ABP=142.405;AC=2;AF=0.166667;AN=12;AO=19;CIGAR=2X;DP=384;DPB=384;DPRA=1.01176;EPP=44.2683;EPPR=793.426;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.947368;PAIREDR=0.870879;PAO=0;PQA=0;PQR=0;PRO=0;QA=769;QR=14343;RO=364;RPL=0;RPP=44.2683;RPPR=793.426;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=364;SRP=793.426;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:69:69,0:69:2688:0:0:0,-20.7711,-242.05 0|0:63:62,0:62:2410:0:0:0,-18.6639,-216.941 0|0:45:45,0:45:1786:0:0:0,-13.5463,-160.953 0|0:78:78,0:78:3078:0:0:0,-23.4803,-277.116 0|1:51:39,12:39:1559:12:485:-28.6484,0,-125.19 0|1:78:71,7:71:2822:7:284:-2.45345,0,-230.611 dDocent_Contig_767 9 . G A 35068.9 . AB=0.125099;ABP=4618.88;AC=6;AF=0.5;AN=12;AO=473;CIGAR=2M3X1M1X2M3I2M1X1M1D4M;DP=3781;DPB=4239.28;DPRA=0;EPP=1030.12;EPPR=424.276;GTI=0;LEN=1;MEANALT=83.1667;MQM=40;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=18390;QR=7574;RO=194;RPL=0;RPP=1030.12;RPPR=424.276;RPR=473;RUN=1;SAF=473;SAP=1030.12;SAR=0;SRF=194;SRP=424.276;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:611:32,168,28,91:32:1245:168,28,91:5975,1086,3562:-622.4,-169.149,-220.894,-549.04,-188.474,-642.929,-360.564,0,-379.889,-435.489 0|1:861:49,201,34,135:49:1921:201,34,135:7052,1311,5214:-771.364,-240.205,-337.671,-685.825,-297.888,-833.563,-387.935,0,-445.618,-505.269 0|1:373:17,88,22,45:17:668:88,22,45:3113,845,1767:-314.94,-79.536,-107.99,-255.811,-70.2358,-304.134,-185.575,0,-176.274,-226.974 0|1:881:52,295,69,92:52:2004:295,69,92:10398,2695,3580:-897.767,-108.206,-183.949,-707.927,-67.2607,-851.703,-640.665,0,-599.719,-777.518 0|1:383:21,71,9,51:21:822:71,9,51:2480,341,1993:-270.007,-84.3367,-130.554,-250.116,-125.714,-314.997,-124.4,0,-165.778,-176.638 0|1:672:23,196,37,59:23:914:196,37,59:7024,1446,2274:-634.406,-98.3551,-114.606,-531.019,-63.2969,-595.133,-467.721,0,-432.662,-525.213 dDocent_Contig_768 15 . G T 70.8098 . AB=0.12766;ABP=59.6072;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=268;DPB=268;DPRA=0.985185;EPP=20.3821;EPPR=567.593;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.25;PAIREDR=0.757692;PAO=0;PQA=0;PQR=0;PRO=0;QA=314;QR=10132;RO=260;RPL=0;RPP=20.3821;RPPR=567.593;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=260;SRP=567.593;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:47:41,6:41:1592:6:232:-7.0987,0,-129.382 0/0:62:62,0:62:2408:0:0:0,-18.6639,-216.894 0/0:46:45,1:45:1770:1:41:0,-9.75281,-155.421 0/0:41:41,0:41:1593:0:0:0,-12.3422,-143.617 0/0:32:32,0:32:1246:0:0:0,-9.63296,-112.419 0/0:40:39,1:39:1523:1:41:0,-7.94663,-133.225 dDocent_Contig_769 10 . G A 645.699 . AB=0.148438;ABP=140.424;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=2M1X1M;DP=162;DPB=155.75;DPRA=0;EPP=46.4397;EPPR=257.073;GTI=0;LEN=1;MEANALT=1.8;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=1.38778e-17;PAIRED=0.95;PAIREDR=0.82906;PAO=0;PQA=0;PQR=0;PRO=0;QA=797;QR=4457;RO=117;RPL=0;RPP=46.4397;RPPR=257.073;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=117;SRP=257.073;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:18:16,0,2,0:16:605:0,2,0:0,77,0:-1.8906,-6.70708,-56.2922,0,-49.969,-49.367,-6.70708,-56.2922,-49.969,-56.2922 0|0:43:19,15,2,7:19:726:15,2,7:557,73,277:-39.8489,0,-55.0482,-39.6058,-53.6013,-98.5733,-22.7655,-36.7642,-76.3766,-80.2326 0|0:16:15,0,0,1:15:573:0,0,1:0,0,41:0,-4.51545,-51.5038,-4.51545,-51.5038,-51.5038,-0.721913,-48.118,-48.118,-47.8169 0|0:25:21,3,0,1:21:798:3,0,1:117,0,40:-3.28857,0,-64.5208,-9.6102,-65.4238,-75.0426,-6.31264,-62.1279,-71.7467,-71.4457 0|1:23:17,3,0,3:17:659:3,0,3:112,0,119:-4.68991,-0.648451,-53.8801,-9.80742,-54.7832,-63.9517,0,-44.986,-54.1544,-53.2513 0|1:37:29,0,0,8:29:1096:0,0,8:0,0,320:-18.0294,-26.7592,-116.579,-26.7592,-116.579,-116.579,0,-90.2144,-90.2144,-87.8061 dDocent_Contig_770 24 . G T 1724.2 . AB=0.05;ABP=319.611;AC=0;AF=0;AN=12;AO=9;CIGAR=1M3I7M1X;DP=946;DPB=1003.89;DPRA=1.44;EPP=22.5536;EPPR=1607.73;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=60;NS=6;NUMALT=6;ODDS=0;PAIRED=1;PAIREDR=0.989175;PAO=0;PQA=0;PQR=0;PRO=0;QA=338;QR=29104;RO=739;RPL=0;RPP=22.5536;RPPR=1607.73;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=739;SRP=1607.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:125:115,0,10,0,0,0,0:115:4542:0,10,0,0,0,0:0,396,0,0,0,0:0,-34.6184,-408.358,-1.63217,-375.767,-372.757,-34.6184,-408.358,-375.767,-408.358,-34.6184,-408.358,-375.767,-408.358,-408.358,-34.6184,-408.358,-375.767,-408.358,-408.358,-408.358,-34.6184,-408.358,-375.767,-408.358,-408.358,-408.358,-408.358 0|0:195:147,0,1,32,0,13,0:147:5775:0,1,32,0,13,0:0,41,1226,0,506,0:-56.3577,-100.609,-575.597,-97.2243,-572.213,-571.912,0,-475,-471.616,-465.367,-100.609,-575.597,-572.213,-475,-575.597,-59.0226,-534.015,-530.63,-433.418,-534.015,-530.101,-100.609,-575.597,-572.213,-475,-575.597,-534.015,-575.597 0|0:91:60,0,0,0,5,25,0:60:2367:0,0,0,5,25,0:0,0,0,193,994,0:-63.8253,-81.8871,-276.643,-81.8871,-276.643,-276.643,-81.8871,-276.643,-276.643,-276.643,-66.0384,-260.795,-260.795,-260.795,-259.289,0,-194.801,-194.801,-194.801,-178.953,-187.275,-81.8871,-276.643,-276.643,-276.643,-260.795,-194.801,-276.643 0|0:169:131,0,7,17,0,11,0:131:5164:0,7,17,0,11,0:0,283,651,0,439,0:-13.9782,-53.4131,-478.257,-30.0768,-454.924,-452.817,0,-424.841,-401.508,-419.724,-53.4131,-478.257,-454.924,-424.841,-478.257,-17.2529,-442.101,-418.768,-388.685,-442.101,-438.79,-53.4131,-478.257,-454.924,-424.841,-478.257,-442.101,-478.257 0|0:186:140,0,0,0,0,22,22:140:5492:0,0,0,0,22,22:0,0,0,0,865,829:-28.9346,-71.0788,-522.72,-71.0788,-522.72,-522.72,-71.0788,-522.72,-522.72,-522.72,-71.0788,-522.72,-522.72,-522.72,-522.72,0,-451.656,-451.656,-451.656,-451.656,-445.033,-3.16581,-454.809,-454.809,-454.809,-454.809,-383.745,-448.187 0|0:180:146,9,0,17,0,6,0:146:5764:9,0,17,0,6,0:338,0,685,0,226,0:-12.5248,-28.7972,-500.369,-56.4752,-503.078,-530.76,0,-446.616,-474.298,-469.18,-56.4752,-503.078,-530.76,-474.298,-530.76,-37.965,-484.566,-512.248,-455.786,-512.248,-510.441,-56.4752,-503.078,-530.76,-474.298,-530.76,-512.248,-530.76 dDocent_Contig_771 8 . T C 60.0075 . AB=0.122807;ABP=73.4498;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=274;DPB=274;DPRA=1.31336;EPP=18.2106;EPPR=582.793;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992509;PAO=0;PQA=0;PQR=0;PRO=0;QA=257;QR=10216;RO=267;RPL=0;RPP=18.2106;RPPR=582.793;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=267;SRP=582.793;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1159:0:0:0,-9.0309,-104.609 0/0:62:62,0:62:2361:0:0:0,-18.6639,-212.696 0/0:21:21,0:21:795:0:0:0,-6.32163,-71.8717 0/1:57:50,7:50:1921:7:257:-6.31951,0,-155.975 0/0:61:61,0:61:2317:0:0:0,-18.3628,-208.747 0/0:43:43,0:43:1663:0:0:0,-12.9443,-149.93 dDocent_Contig_772 81 . A G 3589.33 . AB=0.301158;ABP=180.903;AC=4;AF=0.333333;AN=12;AO=159;CIGAR=1X;DP=795;DPB=795;DPRA=0.509821;EPP=348.274;EPPR=1381.9;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5844;QR=23837;RO=635;RPL=159;RPP=348.274;RPPR=1381.9;RPR=0;RUN=1;SAF=159;SAP=348.274;SAR=0;SRF=635;SRP=1381.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:125:90,35:90:3228:35:1237:-73.9964,0,-253.099 0/0:53:50,3:50:1827:3:111:0,-5.60067,-154.35 0/1:57:45,12:45:1697:12:450:-23.6845,0,-135.832 0/1:81:52,29:52:1969:29:1075:-72.6688,0,-153.068 0/0:224:224,0:224:8490:0:0:0,-67.4307,-763.877 0/1:255:174,80:174:6626:80:2971:-190.989,0,-519.673 dDocent_Contig_773 27 . C A 29358.6 . AB=0.0376963;ABP=1775.86;AC=0;AF=0;AN=12;AO=36;CIGAR=1X2M1X;DP=2214;DPB=2223.75;DPRA=0;EPP=81.1833;EPPR=2519.75;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.996549;PAO=0;PQA=0;PQR=0;PRO=0;QA=1431;QR=45975;RO=1159;RPL=0;RPP=81.1833;RPPR=2519.75;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=1159;SRP=2519.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:331:164,0,167:164:6489:0,167:0,6595:-493.641,-543.01,-1077.02,0,-534.409,-484.137 0|0:367:137,0,229:137:5430:0,229:0,9195:-716.411,-757.652,-1204.58,0,-446.935,-377.999 0|0:189:81,0,108:81:3189:0,108:0,4341:-333.738,-358.122,-620.437,0,-262.712,-230.201 0|0:372:223,0,136:223:8873:0,136:0,5464:-383.119,-450.249,-1180.8,0,-730.555,-689.615 0|0:467:217,28,221:217:8632:28,221:1111,8738:-653.691,-627.558,-1329.82,0,-619.233,-644.161 0|0:488:337,8,141:337:13362:8,141:320,5597:-359.258,-434.346,-1531.76,0,-1073.46,-1057.37 dDocent_Contig_774 15 . C A 46.8213 . AB=0.15;ABP=24.2907;AC=2;AF=0.166667;AN=12;AO=3;CIGAR=1X;DP=73;DPB=73;DPRA=0.754717;EPP=9.52472;EPPR=155.013;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.885714;PAO=0;PQA=0;PQR=0;PRO=0;QA=119;QR=2803;RO=70;RPL=0;RPP=9.52472;RPPR=155.013;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=70;SRP=155.013;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:11:9,2:9:364:2:78:-4.09214,0,-29.8126 0/1:9:8,1:8:312:1:41:-1.3853,0,-25.731 0/0:16:16,0:16:649:0:0:0,-4.81648,-58.7435 0/0:12:12,0:12:477:0:0:0,-3.61236,-43.2803 0/0:14:14,0:14:570:0:0:0,-4.21442,-51.6422 0/0:11:11,0:11:431:0:0:0,-3.31133,-39.1417 dDocent_Contig_776 27 . G A 1488.56 . AB=0.158703;ABP=595.904;AC=2;AF=0.166667;AN=12;AO=98;CIGAR=1X;DP=1475;DPB=1475;DPRA=1.7114;EPP=215.815;EPPR=2993.13;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3800;QR=53249;RO=1377;RPL=0;RPP=215.815;RPPR=2993.13;RPR=98;RUN=1;SAF=98;SAP=215.815;SAR=0;SRF=1377;SRP=2993.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:258:224,34:224:8658:34:1322:-41.5879,0,-701.222 0/0:415:415,0:415:16025:0:0:0,-124.927,-1441.26 0/0:345:340,5:340:13238:5:182:0,-87.1229,-1173.86 0/1:328:269,59:269:10371:59:2296:-108.081,0,-834.169 0/0:77:77,0:77:2981:0:0:0,-23.1793,-268.427 0/0:52:52,0:52:1976:0:0:0,-15.6536,-178.065 dDocent_Contig_777 147 . N G 882.856 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=24;CIGAR=1X;DP=24;DPB=24;DPRA=0;EPP=55.1256;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=947;QR=0;RO=0;RPL=24;RPP=55.1256;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=55.1256;SAR=24;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:159:-14.6908,-1.20412,0 1/1:8:0,8:0:0:8:321:-29.2576,-2.40824,0 1/1:3:0,3:0:0:3:119:-11.0954,-0.90309,0 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 1/1:3:0,3:0:0:3:112:-10.4463,-0.90309,0 1/1:4:0,4:0:0:4:155:-14.3244,-1.20412,0 dDocent_Contig_778 15 . C A 38.2292 . AB=0.0882353;ABP=553.798;AC=1;AF=0.0833333;AN=12;AO=93;CIGAR=1X;DP=2274;DPB=2274;DPRA=3.35424;EPP=204.957;EPPR=4736.82;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998165;PAO=0;PQA=0;PQR=0;PRO=0;QA=3702;QR=87256;RO=2180;RPL=0;RPP=204.957;RPPR=4736.82;RPR=93;RUN=1;SAF=93;SAP=204.957;SAR=0;SRF=2180;SRP=4736.82;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:495:485,10:485:19374:10:407:0,-112.019,-1705.03 0/0:561:541,19:541:21620:19:765:0,-99.8168,-1874.77 0/1:374:341,33:341:13710:33:1294:-4.14161,0,-1120.23 0/0:549:518,31:518:20722:31:1236:0,-53.7521,-1751.66 0/0:204:204,0:204:8192:0:0:0,-61.4101,-736.802 0/0:91:91,0:91:3638:0:0:0,-27.3937,-327.432 dDocent_Contig_779 47 . G C 518.206 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=16;CIGAR=1X;DP=16;DPB=16;DPRA=0;EPP=37.7539;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=549;QR=0;RO=0;RPL=0;RPP=37.7539;RPPR=0;RPR=16;RUN=1;SAF=0;SAP=37.7539;SAR=16;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:66:-6.26818,-0.60206,0 1/1:6:0,6:0:0:6:204:-18.6937,-1.80618,0 ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:140:-12.9449,-1.20412,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:3:0,3:0:0:3:104:-9.70309,-0.90309,0 dDocent_Contig_780 12 . C T 83.5276 . AB=0.2;ABP=18.6449;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=325;DPB=325;DPRA=0.327869;EPP=11.6962;EPPR=700.053;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993769;PAO=0;PQA=0;PQR=0;PRO=0;QA=159;QR=12634;RO=321;RPL=0;RPP=11.6962;RPPR=700.053;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=321;SRP=700.053;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:53:53,0:53:2080:0:0:0,-15.9546,-187.387 0/0:72:72,0:72:2770:0:0:0,-21.6742,-249.44 0/0:77:77,0:77:3062:0:0:0,-23.1793,-275.673 0/0:80:80,0:80:3177:0:0:0,-24.0824,-286.014 0/0:23:23,0:23:907:0:0:0,-6.92369,-81.9404 0/1:20:16,4:16:638:4:159:-8.67152,0,-51.7345 dDocent_Contig_781 22 . T C 424.673 . AB=0.154321;ABP=171.152;AC=2;AF=0.166667;AN=12;AO=36;CIGAR=1X;DP=508;DPB=508;DPRA=0.692488;EPP=81.1833;EPPR=1025.77;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.993631;PAO=0;PQA=0;PQR=0;PRO=0;QA=1400;QR=17877;RO=471;RPL=0;RPP=81.1833;RPPR=1025.77;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=471;SRP=1025.77;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:40,4:40:1467:4:114:0,-2.70863,-121.75 0/1:83:71,12:71:2693:12:486:-19.1053,0,-217.552 0/1:79:66,13:66:2505:13:529:-24.1755,0,-201.86 0/0:89:82,7:82:3148:7:271:0,-2.03952,-258.698 0/0:107:107,0:107:4102:0:0:0,-32.2102,-369.231 0/0:106:105,0:105:3962:0:0:0,-31.6081,-356.25 dDocent_Contig_782 91 . T C 9929.29 . AB=0.259621;ABP=928.998;AC=5;AF=0.416667;AN=12;AO=529;CIGAR=1X;DP=2402;DPB=2402;DPRA=0;EPP=1151.72;EPPR=4070.18;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998932;PAO=0;PQA=0;PQR=0;PRO=0;QA=19025;QR=67208;RO=1873;RPL=529;RPP=1151.72;RPPR=4070.18;RPR=0;RUN=1;SAF=529;SAP=1151.72;SAR=0;SRF=1873;SRP=4070.18;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:216:148,68:148:5208:68:2400:-151.235,0,-403.844 0/1:456:318,138:318:11153:138:4896:-303.528,0,-866.414 0/1:270:222,48:222:7999:48:1743:-75.8666,0,-638.606 0/0:557:507,50:507:18365:50:1797:0,-5.67257,-1490.32 0/1:522:392,130:392:14175:130:4724:-268.15,0,-1118.28 0/1:381:286,95:286:10308:95:3465:-197.351,0,-812.89 dDocent_Contig_783 19 . A C 32374.3 . AB=0.0515654;ABP=1899.9;AC=0;AF=0;AN=12;AO=56;CIGAR=1X1M1X2M2X12M;DP=1718;DPB=1725.05;DPRA=0;EPP=124.613;EPPR=617.537;GTI=0;LEN=1;MEANALT=9.75;MQM=60;MQMR=60;NS=6;NUMALT=7;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2231;QR=11122;RO=283;RPL=0;RPP=124.613;RPPR=617.537;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=283;SRP=617.537;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:222:41,17,86,7,19,3,19,25:41:1611:17,86,7,19,3,19,25:678,3387,273,758,119,752,964:-266.281,-222.787,-350.173,0,-76.6677,-106.616,-256.184,-332.852,-110.065,-386.581,-216.196,-292.864,-70.0771,-326.261,-342.981,-268.827,-345.495,-122.708,-378.892,-338.905,-400.428,-216.738,-293.406,-70.6193,-326.803,-286.816,-339.447,-343.523,-199.485,-276.152,-53.3661,-309.549,-269.562,-322.193,-270.104,-324.462 0|0:335:76,14,211,16,0,0,9,5:76:3006:14,211,16,0,0,9,5:557,8272,636,0,0,339,199:-657.318,-634.335,-877.507,0,-201.526,-183.871,-627.835,-829.36,-195.026,-870.405,-680.197,-881.722,-247.388,-875.221,-927.583,-680.197,-881.722,-247.388,-875.221,-927.583,-927.583,-652.422,-853.947,-219.614,-847.446,-899.808,-899.808,-897.099,-663.811,-865.336,-231.002,-858.835,-911.197,-911.197,-883.422,-909.692 0|0:279:71,14,114,16,46,3,0,14:71:2764:14,114,16,46,3,0,14:560,4444,636,1823,122,0,555:-343.87,-319.113,-542.042,0,-181.011,-192.824,-312.881,-493.894,-174.779,-535.208,-215.203,-396.216,-77.1003,-389.984,-428.499,-355.18,-536.193,-217.078,-529.961,-432.283,-581.42,-365.243,-546.257,-227.141,-540.025,-442.346,-582.324,-592.387,-319.56,-500.574,-181.458,-494.342,-396.663,-536.64,-546.704,-542.489 0|0:250:48,11,103,21,10,22,8,15:48:1901:11,103,21,10,22,8,15:436,4031,839,395,853,309,589:-316.97,-295.531,-448.683,0,-120.576,-125.459,-262.313,-382.888,-87.3578,-412.455,-298.918,-419.493,-123.963,-386.275,-452.371,-261.351,-381.926,-86.3965,-348.708,-385.313,-411.192,-306.045,-426.62,-131.09,-393.402,-430.007,-392.44,-460.1,-282.983,-403.558,-108.028,-370.341,-406.945,-369.378,-414.072,-434.932 0|0:354:15,0,203,129,0,0,0,0:15:585:0,203,129,0,0,0,0:0,7868,5017,0,0,0,0:-1005.95,-1010.47,-1058.56,-364.164,-412.25,-351.141,-598.241,-646.326,0,-607.493,-1010.47,-1058.56,-412.25,-646.326,-1058.56,-1010.47,-1058.56,-412.25,-646.326,-1058.56,-1058.56,-1010.47,-1058.56,-412.25,-646.326,-1058.56,-1058.56,-1058.56,-1010.47,-1058.56,-412.25,-646.326,-1058.56,-1058.56,-1058.56,-1058.56 0|0:278:32,0,179,58,4,0,0,0:32:1255:0,179,58,4,0,0,0:0,7051,2239,159,0,0,0:-651.036,-660.669,-763.874,-80.6371,-183.845,-129.961,-476.827,-580.032,0,-562.572,-647.578,-750.783,-170.754,-566.941,-749.579,-660.669,-763.874,-183.845,-580.032,-750.783,-763.874,-660.669,-763.874,-183.845,-580.032,-750.783,-763.874,-763.874,-660.669,-763.874,-183.845,-580.032,-750.783,-763.874,-763.874,-763.874 dDocent_Contig_785 34 . C G 448.771 . AB=0.168919;ABP=143.921;AC=2;AF=0.166667;AN=12;AO=30;CIGAR=1X;DP=462;DPB=462;DPRA=1.76596;EPP=68.1545;EPPR=941.086;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993056;PAO=0;PQA=0;PQR=0;PRO=0;QA=1192;QR=17183;RO=432;RPL=0;RPP=68.1545;RPPR=941.086;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=432;SRP=941.086;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:47:47,0:47:1861:0:0:0,-14.1484,-167.693 0/0:85:84,1:84:3347:1:41:0,-21.493,-297.194 0/0:130:128,2:128:5084:2:75:0,-32.0151,-450.317 0/0:52:50,2:50:1970:2:81:0,-7.96783,-169.803 0/1:77:62,15:62:2476:15:601:-31.2497,0,-199.805 0/1:71:61,10:61:2445:10:394:-14.441,0,-198.824 dDocent_Contig_786 12 . G T 15175.6 . AB=0.224081;ABP=2018.55;AC=4;AF=0.333333;AN=12;AO=722;CIGAR=1X;DP=5345;DPB=5345;DPRA=0;EPP=1570.81;EPPR=10041.7;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998615;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=28636;QR=183194;RO=4623;RPL=0;RPP=1570.81;RPPR=10041.7;RPR=722;RUN=1;SAF=722;SAP=1570.81;SAR=0;SRF=4623;SRP=10041.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:669:541,128:541:21392:128:5055:-253.461,0,-1722.16 0/1:885:704,181:704:27845:181:7177:-379.195,0,-2237.27 0/1:700:480,220:480:19134:220:8761:-577.271,0,-1509.77 0/1:794:640,154:640:25380:154:6103:-310.034,0,-2043.03 0/0:1097:1072,25:1072:42395:25:984:0,-241.37,-3722.84 0/0:1200:1186,14:1186:47048:14:556:0,-310.854,-4179.62 dDocent_Contig_787 1 . N G 992.295 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=27;CIGAR=1X;DP=27;DPB=27;DPRA=0;EPP=61.6401;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=59.2222;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.111111;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1073;QR=0;RO=0;RPL=0;RPP=61.6401;RPPR=0;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:37:-3.69783,-0.30103,0 1/1:3:0,3:0:0:3:116:-10.8168,-0.90309,0 1/1:8:0,8:0:0:8:323:-29.0672,-2.40824,0 1/1:5:0,5:0:0:5:194:-17.8305,-1.50515,0 1/1:4:0,4:0:0:4:159:-14.6917,-1.20412,0 1/1:6:0,6:0:0:6:244:-22.3388,-1.80618,0 dDocent_Contig_788 12 . T C 10193.5 . AB=0.592129;ABP=44.2217;AC=6;AF=0.5;AN=12;AO=331;CIGAR=1X;DP=559;DPB=559;DPRA=0;EPP=721.768;EPPR=495.935;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.993958;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13227;QR=9062;RO=227;RPL=0;RPP=721.768;RPPR=495.935;RPR=331;RUN=1;SAF=331;SAP=721.768;SAR=0;SRF=227;SRP=495.935;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:80:18,62:18:723:62:2486:-199.798,0,-41.3102 0/1:114:27,86:27:1067:86:3433:-274.883,0,-62.1805 0/1:74:29,45:29:1164:45:1798:-139.758,0,-82.7604 0/1:112:60,52:60:2367:52:2102:-155.638,0,-179.469 0/1:54:21,33:21:850:33:1282:-99.3867,0,-60.5537 0/1:125:72,53:72:2891:53:2126:-153.881,0,-222.657 dDocent_Contig_790 18 . G A 155.17 . AB=0.142857;ABP=80.5629;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=228;DPB=228;DPRA=1.15217;EPP=37.7539;EPPR=463.362;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.891509;PAO=0;PQA=0;PQR=0;PRO=0;QA=647;QR=8380;RO=212;RPL=0;RPP=37.7539;RPPR=463.362;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=212;SRP=463.362;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:31,0:31:1215:0:0:0,-9.33193,-109.624 0/0:40:37,3:37:1475:3:122:0,-0.668707,-121.629 0/1:30:27,3:27:1060:3:123:-2.43389,0,-86.6532 0/0:38:38,0:38:1525:0:0:0,-11.4391,-137.493 0/1:40:33,7:33:1292:7:284:-13.8926,0,-104.506 0/0:49:46,3:46:1813:3:118:0,-3.74889,-152.379 dDocent_Contig_791 98 . N A 2010.75 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=67;CIGAR=2X;DP=67;DPB=361.5;DPRA=0;EPP=148.499;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=56.5075;MQMR=0;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=1;PAIREDR=0;PAO=589;PQA=19648;PQR=0;PRO=0;QA=2228;QR=0;RO=0;RPL=67;RPP=148.499;RPPR=0;RPR=0;RUN=1;SAF=67;SAP=148.499;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:1:0,1:0:0:1:35:-3.149,-0.30103,0 1|1:10:0,10:0:0:10:323:-29.0549,-3.0103,0 1|1:32:0,32:0:0:32:1086:-97.6378,-9.63296,0 1|1:15:0,15:0:0:15:506:-45.4657,-4.51545,0 1|1:5:0,5:0:0:5:149:-13.406,-1.50515,0 1|1:4:0,4:0:0:4:129:-11.5765,-1.20412,0 dDocent_Contig_792 1 . N G 150.627 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=4.60517;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=163;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:163:-15.0584,-1.20412,0 dDocent_Contig_793 29 . T G 1170.98 . AB=0.203704;ABP=44.1879;AC=0;AF=0;AN=12;AO=14;CIGAR=3M1X1M;DP=343;DPB=377.8;DPRA=0;EPP=33.4109;EPPR=584.965;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.970149;PAO=0;PQA=0;PQR=0;PRO=0;QA=558;QR=10296;RO=268;RPL=0;RPP=33.4109;RPPR=584.965;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=268;SRP=584.965;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:62:60,1,1:60:2292:1,1:38,38:0,-14.9453,-202.693,-14.9453,-199.877,-202.693 0|0:62:59,0,2:59:2291:0,2:0,81:0,-17.7608,-205.985,-11.0849,-199.306,-198.703 0|0:38:31,6,0:31:1197:6,0:232,0:-9.73028,0,-96.5055,-19.0622,-98.3117,-117.368 0|0:54:29,13,11:29:1103:13,11:476,439:-30.1502,0,-86.5252,-2.71279,-54.2801,-89.861 0|0:51:46,5,0:46:1739:5,0:177,0:-0.921435,0,-141.404,-14.7688,-142.909,-157.321 0|0:76:43,31,0:43:1674:31,0:1121,0:-78.65,0,-128.386,-91.5943,-137.718,-229.194 dDocent_Contig_794 10 . G A 79.6465 . AB=0.1;ABP=183.677;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=964;DPB=964;DPRA=1.40399;EPP=46.4397;EPPR=2052.88;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.85;PAIREDR=0.98411;PAO=0;PQA=0;PQR=0;PRO=0;QA=799;QR=37557;RO=944;RPL=0;RPP=46.4397;RPPR=2052.88;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=944;SRP=2052.88;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:227:224,3:224:8899:3:119:0,-57.2388,-789.3 0/0:235:235,0:235:9354:0:0:0,-70.742,-841.284 0/0:111:111,0:111:4432:0:0:0,-33.4143,-398.818 0/0:206:202,4:202:8024:4:157:0,-47.5039,-707.228 0/0:55:55,0:55:2186:0:0:0,-16.5566,-196.914 0/1:130:117,13:117:4662:13:523:-8.28341,0,-380.361 dDocent_Contig_795 64 . G T 14981.7 . AB=0.257331;ABP=1555.4;AC=5;AF=0.416667;AN=12;AO=825;CIGAR=1X;DP=3526;DPB=3526;DPRA=0;EPP=1794.48;EPPR=5865.99;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=28347;QR=92338;RO=2700;RPL=825;RPP=1794.48;RPPR=5865.99;RPR=0;RUN=1;SAF=825;SAP=1794.48;SAR=0;SRF=2700;SRP=5865.99;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:437:371,66:371:12797:66:2249:-71.1266,0,-1020.1 0/1:648:550,98:550:18767:98:3368:-108.286,0,-1493.7 0/0:491:446,44:446:15296:44:1523:0,-10.4306,-1239.13 0/1:629:560,69:560:19153:69:2396:-26.5584,0,-1534.14 0/1:688:348,340:348:11875:340:11720:-847.65,0,-861.595 0/1:633:425,208:425:14450:208:7091:-447.748,0,-1109.82 dDocent_Contig_796 39 . A G 71663.6 . AB=0.035809;ABP=4236.52;AC=0;AF=0;AN=12;AO=81;CIGAR=2X;DP=3756;DPB=3756;DPRA=0;EPP=178.9;EPPR=2886.73;GTI=0;LEN=1;MEANALT=2.25;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3135;QR=51071;RO=1328;RPL=0;RPP=178.9;RPPR=2886.73;RPR=81;RUN=1;SAF=81;SAP=178.9;SAR=0;SRF=1328;SRP=2886.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:404:161,12,231:161:6168:12,231:453,8976:-689.004,-700.352,-1202.89,0,-469.036,-436.617 0|0:626:237,17,372:237:9145:17,372:665,14612:-1130.41,-1147.09,-1892.91,0,-696.269,-638.956 0|0:497:227,14,255:227:8721:14,255:548,10068:-760.06,-783.342,-1494.93,0,-670.764,-639.054 0|0:794:313,0,481:313:11913:0,481:0,18889:-1459.63,-1553.85,-2530.82,0,-977.357,-832.562 0|0:700:234,0,465:234:9044:0,465:0,18303:-1435.41,-1505.85,-2248.58,0,-743.029,-603.05 0|0:735:156,38,541:156:6080:38,541:1469,21196:-1695.85,-1622.17,-2110.43,0,-379.066,-336.849 dDocent_Contig_798 24 . A G 7666.03 . AB=0.356511;ABP=144.469;AC=5;AF=0.416667;AN=12;AO=282;CIGAR=1X;DP=841;DPB=841;DPRA=3.164;EPP=615.366;EPPR=1214.69;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11191;QR=22150;RO=558;RPL=0;RPP=615.366;RPPR=1214.69;RPR=282;RUN=1;SAF=282;SAP=615.366;SAR=0;SRF=558;SRP=1214.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:40:33,7:33:1330:7:281:-13.6211,0,-107.919 0/1:95:59,35:59:2360:35:1406:-98.0845,0,-183.847 0/1:43:27,16:27:1071:16:632:-44.2641,0,-83.7381 0/0:50:50,0:50:1979:0:0:0,-15.0515,-178.307 0/1:355:208,147:208:8276:147:5784:-413.512,0,-637.526 0/1:258:181,77:181:7134:77:3088:-200.323,0,-564.093 dDocent_Contig_799 75 . T G 24631.8 . AB=0.771574;ABP=634.005;AC=7;AF=0.583333;AN=12;AO=834;CIGAR=1X;DP=1062;DPB=1062;DPRA=0;EPP=1814.02;EPPR=498.106;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=30795;QR=8437;RO=228;RPL=834;RPP=1814.02;RPPR=498.106;RPR=0;RUN=1;SAF=834;SAP=1814.02;SAR=0;SRF=228;SRP=498.106;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:217:51,166:51:1841:166:5988:-473.668,0,-100.639 0/1:294:56,238:56:2016:238:8649:-689.851,0,-93.2024 0/1:231:61,170:61:2319:170:6398:-506.208,0,-139.39 0/1:202:48,154:48:1821:154:5743:-456.044,0,-103.335 0/1:41:9,32:9:343:32:1208:-96.6721,0,-18.885 1/1:77:3,74:3:97:74:2809:-243.939,-14.1309,0 dDocent_Contig_800 41 . A T 51.0671 . AB=0.125;ABP=42.0968;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=235;DPB=235;DPRA=1.05195;EPP=18.2106;EPPR=498.106;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8772;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.857143;PAIREDR=0.600877;PAO=0;PQA=0;PQR=0;PRO=0;QA=280;QR=9057;RO=228;RPL=0;RPP=18.2106;RPPR=498.106;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=228;SRP=498.106;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1624:0:0:0,-12.3422,-146.391 0/0:41:41,0:41:1642:0:0:0,-12.3422,-148.012 0/0:30:30,0:30:1201:0:0:0,-9.0309,-108.362 0/0:42:42,0:42:1670:0:0:0,-12.6433,-150.528 0/0:49:46,3:46:1803:3:117:0,-3.84064,-151.562 0/1:32:28,4:28:1117:4:163:-5.42547,0,-91.1821 dDocent_Contig_801 13 . G A 10170.2 . AB=0.317253;ABP=357.777;AC=6;AF=0.5;AN=12;AO=388;CIGAR=1X;DP=1223;DPB=1223;DPRA=0;EPP=845.542;EPPR=1814.02;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.96134;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=15427;QR=33146;RO=834;RPL=0;RPP=845.542;RPPR=1814.02;RPR=388;RUN=1;SAF=388;SAP=845.542;SAR=0;SRF=834;SRP=1814.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:219:148,71:148:5876:71:2841:-189.875,0,-462.728 0/1:202:146,56:146:5872:56:2221:-139.251,0,-467.455 0/1:200:161,39:161:6365:39:1498:-74.8628,0,-512.392 0/1:271:208,63:208:8253:63:2501:-143.65,0,-660.746 0/1:169:68,101:68:2699:101:4037:-312.437,0,-192.163 0/1:162:103,58:103:4081:58:2329:-160.941,0,-318.452 dDocent_Contig_802 35 . A G 76.2641 . AB=0.130435;ABP=57.5803;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=249;DPB=249;DPRA=1.01818;EPP=20.3821;EPPR=526.335;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.460581;PAO=0;PQA=0;PQR=0;PRO=0;QA=320;QR=9462;RO=241;RPL=0;RPP=20.3821;RPPR=526.335;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=241;SRP=526.335;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:38,0:38:1475:0:0:0,-11.4391,-132.999 0/0:48:48,0:48:1867:0:0:0,-14.4494,-168.239 0/0:40:40,0:40:1573:0:0:0,-12.0412,-141.816 0/0:39:39,0:39:1552:0:0:0,-11.7402,-139.924 0/0:38:36,2:36:1410:2:82:0,-3.65946,-119.377 0/1:46:40,6:40:1585:6:238:-7.94517,0,-129.044 dDocent_Contig_803 13 . G C 16356 . AB=0.272765;ABP=1086.59;AC=4;AF=0.333333;AN=12;AO=673;CIGAR=1X;DP=3998;DPB=3998;DPRA=0;EPP=1464.41;EPPR=7188.41;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=26805;QR=130922;RO=3309;RPL=0;RPP=1464.41;RPPR=7188.41;RPR=673;RUN=1;SAF=673;SAP=1464.41;SAR=0;SRF=3309;SRP=7188.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:498:341,156:341:13482:156:6247:-411.951,0,-1062.39 0/1:702:455,242:455:18021:242:9652:-657.871,0,-1410.27 0/1:626:454,162:454:18020:162:6426:-392.266,0,-1434.51 0/1:590:491,99:491:19494:99:3928:-175.913,0,-1575.27 0/0:830:824,6:824:32428:6:234:0,-228.427,-2894.26 0/0:752:744,8:744:29477:8:318:0,-197.388,-2621.35 dDocent_Contig_804 65 . T C 69778.9 . AB=0.513585;ABP=10.3259;AC=6;AF=0.5;AN=12;AO=2344;CIGAR=1X;DP=4564;DPB=4564;DPRA=0;EPP=5092.94;EPPR=4710.76;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.99872;PAIREDR=0.999539;PAO=0;PQA=0;PQR=0;PRO=0;QA=92763;QR=86195;RO=2168;RPL=2344;RPP=5092.94;RPPR=4710.76;RPR=0;RUN=1;SAF=2344;SAP=5092.94;SAR=0;SRF=2168;SRP=4710.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:665:281,375:281:11200:375:14744:-1128.05,0,-809.401 0/1:844:270,561:270:10592:561:22079:-1734.74,0,-702.06 0/1:449:85,361:85:3392:361:14387:-1159.21,0,-170.799 0/1:681:267,414:267:10630:414:16362:-1266.33,0,-750.993 0/1:1003:678,322:678:26994:322:12832:-852.845,0,-2125.96 0/1:922:587,311:587:23387:311:12359:-840.707,0,-1832.08 dDocent_Contig_805 23 . T A 71592.4 . AB=0.798836;ABP=1869.29;AC=8;AF=0.666667;AN=12;AO=2219;CIGAR=1X;DP=2710;DPB=2710;DPRA=0;EPP=4821.51;EPPR=1067.03;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999549;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=87982;QR=19617;RO=490;RPL=0;RPP=4821.51;RPPR=1067.03;RPR=2219;RUN=1;SAF=2219;SAP=4821.51;SAR=0;SRF=490;SRP=1067.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:563:82,481:82:3277:481:19029:-1541.61,0,-125.506 0/1:619:137,482:137:5440:482:19113:-1532.3,0,-303.099 0/1:515:118,396:118:4752:396:15653:-1252.75,0,-272.735 0/1:709:146,563:146:5862:563:22380:-1798.89,0,-313.927 1/1:73:0,73:0:0:73:2899:-261.018,-21.9752,0 1/1:231:7,224:7:286:224:8908:-775.083,-43.4231,0 dDocent_Contig_806 11 . C T 67654.9 . AB=0.131013;ABP=3469.19;AC=3;AF=0.25;AN=12;AO=384;CIGAR=2X4M;DP=2931;DPB=2931;DPRA=0;EPP=836.856;EPPR=146.327;GTI=0;LEN=1;MEANALT=6.5;MQM=59.7214;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.992188;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=15085;QR=2624;RO=66;RPL=0;RPP=836.856;RPPR=146.327;RPR=384;RUN=1;SAF=384;SAP=836.856;SAR=0;SRF=66;SRP=146.327;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:418:14,48,42,312:14:553:48,42,312:1886,1665,10526:-922.217,-788.177,-819.233,-789.388,-696.638,-822.25,-92.7273,0,-1.18329,-44.3117 1|0:552:5,25,79,432:5:201:25,79,432:972,3081,14303:-1358.66,-1289.2,-1298.23,-1106.96,-1052.56,-1099.74,-236.642,-182.25,0,-123.163 1|0:499:7,32,103,352:7:275:32,103,352:1231,4046,11109:-1169.76,-1088.78,-1101.76,-839.656,-779.186,-831.269,-309.609,-249.154,0,-226.264 1|0:494:7,32,61,393:7:281:32,61,393:1276,2397,12932:-1188.41,-1094.5,-1108.02,-993.371,-920.505,-998.163,-173.995,-101.141,0,-78.8449 0|0:510:25,61,44,364:25:1000:61,44,364:2407,1737,13053:-1113.76,-967.322,-1031.34,-978.371,-906.784,-1047.5,-71.5549,0,-11.0111,-44.3627 0|0:458:8,67,55,322:8:314:67,55,322:2626,2159,10927:-1016.68,-839.61,-845.265,-841.533,-687.882,-850.801,-153.625,0,-1.88245,-82.5178 dDocent_Contig_809 33 . G C 37029.8 . AB=0.640293;ABP=236.366;AC=12;AF=1;AN=12;AO=1052;CIGAR=1M1X4M;DP=1588;DPB=1588.33;DPRA=0;EPP=2184.36;EPPR=217.986;GTI=0;LEN=1;MEANALT=6.16667;MQM=53.2595;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0.951521;PAIREDR=0.969697;PAO=0;PQA=0;PQR=0;PRO=0;QA=39862;QR=3866;RO=99;RPL=0;RPP=2287.4;RPPR=217.986;RPR=1052;RUN=1;SAF=1040;SAP=2184.36;SAR=12;SRF=99;SRP=217.986;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:223:16,12,12,0,178:16:626:12,12,0,178:472,478,0,6833:-548.827,-521.286,-569.145,-514.299,-533.413,-562.158,-553.643,-572.757,-565.77,-605.114,-2.1045,-21.2386,-14.2321,-53.5833,0 1|1:280:8,16,31,0,219:8:315:16,31,0,219:622,1211,0,8129:-720.544,-676.892,-697.99,-624.748,-604.603,-641.332,-722.952,-702.807,-650.664,-748.867,-72.3011,-52.1631,0,-98.2189,-32.2934 1|1:214:4,21,27,0,161:4:158:21,27,0,161:832,1056,0,5843:-536.656,-477.983,-484.664,-451.042,-404.167,-455.917,-537.86,-490.985,-464.044,-550.862,-73.8275,-26.9684,0,-86.8309,-38.3651 1|1:307:30,25,57,0,189:30:1167:25,57,0,189:984,2259,0,7333:-676.582,-612.943,-701.312,-499.684,-522.91,-578.421,-685.612,-708.837,-595.579,-781.507,-90.0403,-113.271,0,-185.936,-129.041 1|1:278:28,19,53,22,152:28:1115:19,53,22,152:753,2111,756,5783:-535.968,-483.135,-569.231,-370.56,-401.115,-446.422,-485.472,-516.026,-403.452,-570.664,-82.023,-112.578,0,-114.922,-128.083 1|1:286:13,28,77,12,153:13:485:28,77,12,153:1111,3070,456,5941:-687.609,-610.322,-641.59,-438.706,-397.202,-455.223,-654.14,-612.636,-441.019,-690.224,-213.138,-171.637,0,-215.451,-206.776 dDocent_Contig_810 195 . C T 469.189 . AB=0.13834;ABP=290.443;AC=2;AF=0.166667;AN=12;AO=56;CIGAR=1X;DP=810;DPB=810;DPRA=0.64375;EPP=59.0033;EPPR=53.1903;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.892857;PAIREDR=0.997347;PAO=0;PQA=0;PQR=0;PRO=0;QA=2117;QR=29630;RO=754;RPL=9;RPP=59.0033;RPPR=53.1903;RPR=47;RUN=1;SAF=0;SAP=124.613;SAR=56;SRF=0;SRP=1640.3;SRR=754;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:97:96,1:96:3789:1:21:0,-27.1,-338.939 0/1:101:92,9:92:3599:9:348:-1.27232,0,-293.559 0/0:114:106,8:106:4123:8:293:0,-7.60132,-344.369 0/0:154:142,12:142:5623:12:434:0,-6.96773,-466.536 0/0:192:192,0:192:7511:0:0:0,-57.7978,-675.667 0/1:152:126,26:126:4985:26:1021:-46.4367,0,-402.805 dDocent_Contig_811 98 . N A 166.918 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=164;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:2:0,2:0:0:2:67:-6.36304,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:27:-2.69978,-0.30103,0 dDocent_Contig_812 98 . N T 171.4 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=171;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:57:-5.41388,-0.60206,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:60:-5.6988,-0.60206,0 1/1:1:0,1:0:0:1:20:-1.99996,-0.30103,0 dDocent_Contig_813 26 . A G 751.031 . AB=0.220779;ABP=107.297;AC=4;AF=0.333333;AN=12;AO=37;CIGAR=1X;DP=196;DPB=196;DPRA=0;EPP=83.3548;EPPR=348.274;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.891892;PAIREDR=0.943396;PAO=0;PQA=0;PQR=0;PRO=0;QA=1465;QR=6326;RO=159;RPL=0;RPP=83.3548;RPPR=348.274;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=159;SRP=348.274;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:20,2:20:797:2:65:0,-0.451895,-65.877 0/1:42:35,7:35:1388:7:282:-13.1088,0,-112.538 0/1:31:28,3:28:1127:3:121:-1.94827,0,-92.3818 0/0:20:19,1:19:748:1:40:0,-2.02492,-63.6492 0/1:44:29,15:29:1146:15:591:-40.2751,0,-90.1764 0/1:37:28,9:28:1120:9:366:-22.167,0,-89.9432 dDocent_Contig_814 8 . T A 8350.1 . AB=0.302102;ABP=391.487;AC=6;AF=0.5;AN=12;AO=345;CIGAR=1X;DP=1142;DPB=1142;DPRA=0;EPP=752.168;EPPR=1731.5;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.788406;PAIREDR=0.702261;PAO=0;PQA=0;PQR=0;PRO=0;QA=13128;QR=30666;RO=796;RPL=0;RPP=752.168;RPPR=1731.5;RPR=345;RUN=1;SAF=345;SAP=752.168;SAR=0;SRF=796;SRP=1731.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:186:140,45:140:5403:45:1717:-98.7108,0,-430.17 0/1:223:155,68:155:5958:68:2563:-163.743,0,-469.036 0/1:172:113,59:113:4366:59:2225:-148.69,0,-341.22 0/1:226:139,87:139:5360:87:3339:-232.617,0,-414.352 0/1:144:104,40:104:4002:40:1519:-93.6368,0,-316.914 0/1:191:145,46:145:5577:46:1765:-101.61,0,-444.407 dDocent_Contig_816 47 . A G 2387.28 . AB=0.210526;ABP=404.047;AC=4;AF=0.333333;AN=12;AO=116;CIGAR=1X;DP=990;DPB=990;DPRA=0.627563;EPP=254.901;EPPR=1900.88;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4502;QR=34361;RO=874;RPL=0;RPP=254.901;RPPR=1900.88;RPR=116;RUN=1;SAF=116;SAP=254.901;SAR=0;SRF=874;SRP=1900.88;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:138:94,44:94:3653:44:1724:-113.853,0,-287.279 0/1:129:89,40:89:3532:40:1558:-101.641,0,-279.09 0/1:124:106,18:106:4193:18:687:-24.8275,0,-340.017 0/1:160:146,14:146:5711:14:533:-0.142753,0,-465.672 0/0:234:234,0:234:9156:0:0:0,-70.441,-823.569 0/0:205:205,0:205:8116:0:0:0,-61.7111,-730.026 dDocent_Contig_817 49 . A T 270.832 . AB=0.145038;ABP=146.377;AC=1;AF=0.0833333;AN=12;AO=67;CIGAR=1X;DP=2105;DPB=2105;DPRA=0.653574;EPP=148.499;EPPR=3522.45;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2609;QR=78526;RO=2037;RPL=0;RPP=148.499;RPPR=3522.45;RPR=67;RUN=1;SAF=67;SAP=148.499;SAR=0;SRF=2037;SRP=4426.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:238:238,0:238:9132:0:0:0,-71.6451,-821.504 0/0:489:455,34:455:17539:34:1317:0,-28.395,-1458.6 0/1:131:112,19:112:4365:19:739:-27.402,0,-353.414 0/0:212:198,14:198:7555:14:553:0,-13.7036,-629.586 0/0:538:538,0:538:20729:0:0:0,-161.954,-1864.23 0/0:497:496,0:496:19206:0:0:0,-149.311,-1727.16 dDocent_Contig_818 19 . G C 1319.99 . AB=0.125128;ABP=1193.11;AC=2;AF=0.166667;AN=12;AO=148;CIGAR=1X;DP=2849;DPB=2849;DPRA=0.710224;EPP=324.388;EPPR=5868.16;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.997779;PAO=0;PQA=0;PQR=0;PRO=0;QA=5728;QR=105919;RO=2701;RPL=0;RPP=324.388;RPPR=5868.16;RPR=148;RUN=1;SAF=148;SAP=324.388;SAR=0;SRF=2701;SRP=5868.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:352:349,3:349:13669:3:121:0,-94.6824,-1218.08 0/1:534:466,68:466:18338:68:2632:-76.2677,0,-1488.37 0/0:291:276,15:276:10825:15:588:0,-34.3418,-920.38 0/1:441:387,54:387:15165:54:2101:-56.5451,0,-1231.11 0/0:626:626,0:626:24564:0:0:0,-188.445,-2208.89 0/0:605:597,8:597:23358:8:286:0,-156.052,-2074.38 dDocent_Contig_819 78 . C T 21802.8 . AB=0.734962;ABP=513.225;AC=6;AF=0.5;AN=12;AO=782;CIGAR=1X;DP=1064;DPB=1064;DPRA=0;EPP=1701.1;EPPR=615.366;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=27818;QR=9965;RO=282;RPL=782;RPP=1701.1;RPPR=615.366;RPR=0;RUN=1;SAF=782;SAP=1701.1;SAR=0;SRF=282;SRP=615.366;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:141:16,125:16:536:125:4361:-350.225,0,-6.11142 0/1:143:23,120:23:810:120:4233:-338.104,0,-30.1733 0/1:190:57,133:57:2071:133:4833:-377.902,0,-129.456 0/1:140:50,90:50:1746:90:3274:-252.718,0,-115.277 0/1:296:118,178:118:4164:178:6321:-479.886,0,-285.842 0/1:154:18,136:18:638:136:4796:-385.446,0,-11.3901 dDocent_Contig_820 27 . G A 66497.2 . AB=0.0553385;ABP=2640.95;AC=2;AF=0.166667;AN=12;AO=128;CIGAR=2X;DP=2241;DPB=2241;DPRA=0;EPP=280.959;EPPR=222.329;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.984375;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5026;QR=3970;RO=101;RPL=0;RPP=280.959;RPPR=222.329;RPR=128;RUN=1;SAF=128;SAP=280.959;SAR=0;SRF=101;SRP=222.329;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:407:30,35,1,339:30:1193:35,1,339:1392,41,13520:-1120.71,-1015.13,-1102.82,-1126.36,-1109.97,-1224.28,-16.3882,0,-111.231,-12.5657 1|0:465:28,39,3,395:28:1112:39,3,395:1527,123,15837:-1330.33,-1213.22,-1293.02,-1328.61,-1294.61,-1419.25,-33.9929,0,-115.388,-6.63373 0|0:276:22,15,1,238:22:847:15,1,238:592,41,9522:-779.827,-737.74,-802.758,-783.066,-803.889,-852.298,-2.11717,-22.9319,-68.2605,0 0|0:429:7,28,0,394:7:282:28,0,394:1096,0,15672:-1383.51,-1295.51,-1310.33,-1385.62,-1318.76,-1408.86,-95.3602,-28.5068,-118.606,0 0|0:360:1,9,120,230:1:19:9,120,230:341,4729,9218:-1146.76,-1119.11,-1117.81,-758.031,-731.488,-723.316,-387.656,-361.111,0,-319.826 0|0:304:13,2,77,212:13:517:2,77,212:78,2930,8466:-890.98,-888.482,-930.447,-654.652,-690.807,-674.04,-197.663,-233.821,0,-176.415 dDocent_Contig_821 12 . A G 10553.6 . AB=0.231085;ABP=1073.96;AC=4;AF=0.333333;AN=12;AO=406;CIGAR=4M1X2M;DP=2044;DPB=2012.29;DPRA=0;EPP=884.628;EPPR=3062.61;GTI=0;LEN=1;MEANALT=3.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.22045e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=16153;QR=55149;RO=1409;RPL=0;RPP=884.628;RPPR=3062.61;RPR=406;RUN=1;SAF=406;SAP=884.628;SAR=0;SRF=1409;SRP=3062.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:246:191,15,38:191:7469:15,38:542,1497:-65.6747,-78.9489,-688.51,0,-569.879,-602.668 0|0:339:316,10,12:316:12340:10,12:371,481:0,-64.7729,-1076.19,-55.4716,-1039.57,-1066.31 0|1:382:269,47,66:269:10567:47,66:1784,2626:-135.232,-69.93,-924.898,0,-722.847,-849.264 0|0:289:235,42,10:235:9222:42,10:1591,403:-59.6907,0,-745.8,-97.2109,-725.226,-852.652 0|1:388:230,5,151:230:8966:5,151:187,6023:-426.805,-480.73,-1216.16,0,-721.68,-691.537 0|1:400:168,103,129:168:6585:103,129:3774,5123:-371.158,-113.328,-623.825,0,-233.115,-502.689 dDocent_Contig_822 32 . C A 2080.73 . AB=0.307985;ABP=87.2354;AC=4;AF=0.333333;AN=12;AO=85;CIGAR=1X;DP=351;DPB=351;DPRA=0;EPP=187.585;EPPR=578.45;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3358;QR=10572;RO=265;RPL=0;RPP=187.585;RPPR=578.45;RPR=85;RUN=1;SAF=85;SAP=187.585;SAR=0;SRF=265;SRP=578.45;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:80:58,22:58:2306:22:867:-54.2607,0,-183.615 0/1:56:36,19:36:1443:19:748:-50.7116,0,-113.189 0/1:52:37,15:37:1481:15:604:-39.0437,0,-117.883 0/1:75:50,25:50:2000:25:986:-66.4621,0,-157.617 0/0:36:35,1:35:1406:1:41:0,-6.74251,-122.699 0/0:52:49,3:49:1936:3:112:0,-5.20827,-163.988 dDocent_Contig_823 1 . N G 113.811 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.91202;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=122;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:122:-11.3725,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_824 76 . T C 100.151 . AB=0.130952;ABP=102.381;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=635;DPB=635;DPRA=0.76225;EPP=26.8965;EPPR=1355.84;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995185;PAO=0;PQA=0;PQR=0;PRO=0;QA=392;QR=21792;RO=623;RPL=11;RPP=26.8965;RPPR=1355.84;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=623;SRP=1355.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:67:67,0:67:2339:0:0:0,-20.169,-210.768 0/0:125:125,0:125:4368:0:0:0,-37.6287,-393.301 0/0:149:148,0:148:5216:0:0:0,-44.5524,-469.225 0/1:84:73,11:73:2557:11:392:-10.3338,0,-205.097 0/0:59:59,0:59:2060:0:0:0,-17.7608,-185.669 0/0:151:151,0:151:5252:0:0:0,-45.4555,-472.827 dDocent_Contig_825 15 . A G 122.139 . AB=0.136364;ABP=78.8144;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=329;DPB=329;DPRA=0.653266;EPP=26.8965;EPPR=693.539;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996855;PAO=0;PQA=0;PQR=0;PRO=0;QA=438;QR=12496;RO=318;RPL=0;RPP=26.8965;RPPR=693.539;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=318;SRP=693.539;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1089:0:0:0,-8.42884,-98.3 0/0:37:36,1:36:1431:1:41:0,-7.04354,-124.951 0/1:66:57,9:57:2243:9:356:-12.5327,0,-182.176 0/0:27:26,1:26:1048:1:41:0,-4.03324,-90.5162 0/0:88:88,0:88:3432:0:0:0,-26.4906,-308.939 0/0:83:83,0:83:3253:0:0:0,-24.9855,-292.855 dDocent_Contig_826 9 . A G 653.454 . AB=0.45098;ABP=4.07475;AC=2;AF=0.166667;AN=12;AO=24;CIGAR=1X;DP=230;DPB=230;DPRA=0.691176;EPP=55.1256;EPPR=450.334;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=939;QR=7900;RO=206;RPL=0;RPP=55.1256;RPPR=450.334;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=206;SRP=450.334;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:54,0:54:2071:0:0:0,-16.2556,-186.623 0/0:47:47,0:47:1809:0:0:0,-14.1484,-163.06 0/0:43:42,1:42:1620:1:41:0,-8.84972,-141.971 0/0:35:35,0:35:1336:0:0:0,-10.536,-120.527 0/1:13:8,5:8:292:5:201:-14.5566,0,-22.7142 0/1:38:20,18:20:772:18:697:-51.6024,0,-58.369 dDocent_Contig_827 11 . T G 22641.2 . AB=0.239343;ABP=2411.94;AC=6;AF=0.5;AN=12;AO=977;CIGAR=1X;DP=4082;DPB=4082;DPRA=0;EPP=2124.54;EPPR=6743.26;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998976;PAIREDR=0.999356;PAO=0;PQA=0;PQR=0;PRO=0;QA=38870;QR=123908;RO=3104;RPL=0;RPP=2124.54;RPPR=6743.26;RPR=977;RUN=1;SAF=977;SAP=2124.54;SAR=0;SRF=3104;SRP=6743.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:501:368,133:368:14704:133:5293:-325.424,0,-1171.38 0/1:689:484,205:484:19301:205:8150:-525.662,0,-1528.07 0/1:601:384,217:384:15383:217:8595:-592.146,0,-1202.34 0/1:617:404,213:404:16065:213:8535:-581.926,0,-1258.83 0/1:828:740,87:740:29576:87:3451:-61.5844,0,-2410.09 0/1:846:724,122:724:28879:122:4846:-181.376,0,-2341.81 dDocent_Contig_828 50 . T A 3417.38 . AB=0.176195;ABP=974.741;AC=2;AF=0.166667;AN=12;AO=194;CIGAR=1X;DP=2440;DPB=2440;DPRA=1.40031;EPP=424.276;EPPR=4871.46;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.994657;PAO=0;PQA=0;PQR=0;PRO=0;QA=7594;QR=88800;RO=2246;RPL=194;RPP=424.276;RPPR=4871.46;RPR=0;RUN=1;SAF=194;SAP=424.276;SAR=0;SRF=2246;SRP=4880.14;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:287:284,3:284:11237:3:106:0,-76.5125,-1000.72 0/0:444:441,3:441:17491:3:114:0,-123.027,-1562.2 0/0:228:228,0:228:9005:0:0:0,-68.6348,-809.938 0/0:414:414,0:414:16359:0:0:0,-124.626,-1471.08 0/1:576:458,118:458:18048:118:4666:-246.497,0,-1449.51 0/1:491:421,70:421:16660:70:2708:-96.0547,0,-1350.32 dDocent_Contig_829 38 . A T 86.5079 . AB=0.0864461;ABP=1394.94;AC=1;AF=0.0833333;AN=12;AO=111;CIGAR=1X;DP=4788;DPB=4788;DPRA=1.04153;EPP=244.044;EPPR=10156.8;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=59.9296;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997861;PAO=0;PQA=0;PQR=0;PRO=0;QA=4442;QR=186013;RO=4676;RPL=0;RPP=244.044;RPPR=10156.8;RPR=111;RUN=1;SAF=111;SAP=244.044;SAR=0;SRF=4676;SRP=10156.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:806:793,13:793:31578:13:522:0,-195.303,-2787.44 0/0:945:942,2:942:37447:2:82:0,-276.589,-3354.06 0/0:547:532,15:532:21296:15:605:0,-109.875,-1860.03 0/0:811:811,0:811:32131:0:0:0,-244.135,-2881.52 0/0:742:742,0:742:29599:0:0:0,-223.364,-2661.22 0/1:937:856,81:856:33962:81:3233:-8.96954,0,-2771.44 dDocent_Contig_830 17 . T C 139.504 . AB=0.1375;ABP=94.3207;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=551;DPB=551;DPRA=1.16929;EPP=37.7539;EPPR=1164.75;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=614;QR=21346;RO=535;RPL=0;RPP=37.7539;RPPR=1164.75;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=535;SRP=1164.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:80:69,11:69:2773:11:419:-13.9681,0,-225.6 0/0:90:89,1:89:3550:1:40:0,-23.097,-315.541 0/0:127:123,4:123:4942:4:155:0,-23.9075,-430.325 0/0:92:92,0:92:3681:0:0:0,-27.6948,-331.31 0/0:94:94,0:94:3760:0:0:0,-28.2968,-338.406 0/0:68:68,0:68:2640:0:0:0,-20.47,-237.721 dDocent_Contig_831 14 . C A 77050.6 . AB=0.226106;ABP=3302.7;AC=4;AF=0.333333;AN=12;AO=1145;CIGAR=1X1M1X2M;DP=5064;DPB=5064;DPRA=0;EPP=2489.35;EPPR=2311.29;GTI=0;LEN=1;MEANALT=8.16667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.999127;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=45076;QR=42016;RO=1063;RPL=0;RPP=2489.35;RPPR=2311.29;RPR=1145;RUN=1;SAF=1145;SAP=2489.35;SAR=0;SRF=1063;SRP=2311.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:694:207,179,158,145:207:8214:179,158,145:6984,6199,5758:-511.715,0,-622.258,-64.2662,-166.382,-692.847,-100.041,-202.156,-266.423,-732.535 1|0:976:137,393,234,202:137:5428:393,234,202:15459,9303,8086:-1549.46,-319.143,-647.598,-824.799,0,-1201.12,-924.615,-99.8155,-605.471,-1310.57 0|1:483:153,166,66,97:153:6081:166,66,97:6568,2637,3870:-494.452,0,-450.67,-323.319,-283.45,-804.093,-221.802,-181.933,-505.253,-693.244 1|0:873:121,307,121,320:121:4777:307,121,320:12107,4806,12652:-1607.69,-648.035,-948.659,-1248.47,-645.432,-1605.09,-603.039,0,-600.436,-899.75 0|0:985:280,59,446,191:280:11047:59,446,191:2355,17673,7592:-1370.28,-1260.61,-2151.76,0,-714.954,-774.649,-829.554,-1544.51,-283.898,-1680.97 0|0:1053:165,41,421,421:165:6469:41,421,421:1603,16664,16824:-2175.46,-2093.35,-2612.96,-853.731,-1253.9,-1258.95,-839.457,-1239.62,0,-1244.67 dDocent_Contig_832 27 . T G 891.006 . AB=0.18254;ABP=223.604;AC=4;AF=0.333333;AN=12;AO=49;CIGAR=1X;DP=356;DPB=356;DPRA=0.9125;EPP=109.412;EPPR=669.652;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.387755;PAIREDR=0.508143;PAO=0;PQA=0;PQR=0;PRO=0;QA=1958;QR=12267;RO=307;RPL=0;RPP=109.412;RPPR=669.652;RPR=49;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=307;SRP=669.652;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:49:35,14:35:1396:14:566:-36.5321,0,-111.142 0/1:82:64,18:64:2564:18:720:-40.4412,0,-206.203 0/0:40:37,3:37:1472:3:114:0,-1.40939,-122.095 0/1:51:45,6:45:1784:6:237:-6.34879,0,-145.423 0/1:70:62,8:62:2509:8:321:-8.18345,0,-204.867 0/0:64:64,0:64:2542:0:0:0,-19.2659,-228.904 dDocent_Contig_833 49 . G A 242.903 . AB=0.170732;ABP=80.23;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1X;DP=507;DPB=507;DPRA=0.662295;EPP=44.2683;EPPR=1062.69;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.995902;PAO=0;PQA=0;PQR=0;PRO=0;QA=742;QR=19226;RO=488;RPL=0;RPP=44.2683;RPPR=1062.69;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=488;SRP=1062.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:43:43,0:43:1731:0:0:0,-12.9443,-156.004 0/1:82:68,14:68:2721:14:544:-24.6089,0,-220.317 0/0:65:64,1:64:2523:1:41:0,-15.4724,-223.114 0/0:55:51,4:51:1997:4:157:0,-2.04815,-165.41 0/0:134:134,0:134:5243:0:0:0,-40.338,-471.737 0/0:128:128,0:128:5011:0:0:0,-38.5318,-450.887 dDocent_Contig_834 98 . N T 127.777 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=132;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:111:-10.3539,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:21:-2.09995,-0.30103,0 dDocent_Contig_835 49 . G T 739.166 . AB=0.0446429;ABP=204.725;AC=0;AF=0;AN=12;AO=5;CIGAR=6M1X;DP=173;DPB=163;DPRA=2.33333;EPP=13.8677;EPPR=272.536;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=194;QR=5134;RO=132;RPL=0;RPP=13.8677;RPPR=272.536;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=132;SRP=289.645;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:29:21,8,0:21:834:8,0:310,0:-19.5333,0,-66.6498,-25.855,-69.0581,-94.5232 0|0:33:20,12,1:20:775:12,1:448,41:-30.6258,0,-60.0322,-33.2595,-60.2595,-96.6331 0|0:41:27,11,3:27:1036:11,3:409,112:-25.345,0,-81.727,-24.3042,-75.871,-108.438 0|0:38:32,4,1:32:1252:4,1:124,41:-0.288605,0,-101.771,-6.52056,-99.5904,-109.232 0|0:18:18,0,0:18:697:0,0:0,0:0,-5.41854,-63.0592,-5.41854,-63.0592,-63.0592 0|0:14:14,0,0:14:540:0,0:0,0:0,-4.21442,-48.9414,-4.21442,-48.9414,-48.9414 dDocent_Contig_836 8 . T C 113.262 . AB=0.145455;ABP=63.0614;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=283;DPB=283;DPRA=1.02674;EPP=22.5536;EPPR=597.994;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.777778;PAIREDR=0.354015;PAO=0;PQA=0;PQR=0;PRO=0;QA=344;QR=10504;RO=274;RPL=0;RPP=22.5536;RPPR=597.994;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=274;SRP=597.994;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:55:47,8:47:1785:8:306:-11.3439,0,-144.347 0/0:52:52,0:52:1987:0:0:0,-15.6536,-179.073 0/0:36:36,0:36:1374:0:0:0,-10.8371,-123.941 0/0:56:56,0:56:2173:0:0:0,-16.8577,-195.791 0/0:43:43,0:43:1659:0:0:0,-12.9443,-149.572 0/0:41:40,1:40:1526:1:38:0,-8.54496,-133.815 dDocent_Contig_837 1 . N G 58.2845 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=31;MQMR=0;NS=1;NUMALT=1;ODDS=3.21888;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-5.81141,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_838 9 . T A 16123.3 . AB=0.419048;ABP=26.9172;AC=8;AF=0.666667;AN=12;AO=526;CIGAR=1X;DP=790;DPB=790;DPRA=0;EPP=1145.2;EPPR=576.279;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.994297;PAIREDR=0.996212;PAO=0;PQA=0;PQR=0;PRO=0;QA=20124;QR=10208;RO=264;RPL=0;RPP=1145.2;RPPR=576.279;RPR=526;RUN=1;SAF=526;SAP=1145.2;SAR=0;SRF=264;SRP=576.279;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:97:51,46:51:1968:46:1766:-129.996,0,-148.159 0/1:139:94,45:94:3645:45:1710:-112.316,0,-286.316 0/1:74:27,47:27:1032:47:1803:-140.248,0,-70.9095 0/1:110:72,38:72:2784:38:1451:-97.7536,0,-217.623 1/1:211:12,199:12:468:199:7646:-645.492,-21.0448,0 1/1:159:8,151:8:311:151:5748:-488.931,-19.5095,0 dDocent_Contig_839 48 . G A 430.741 . AB=0.193277;ABP=100.252;AC=2;AF=0.166667;AN=12;AO=43;CIGAR=1X2M1X3M1X5M1X1M;DP=425;DPB=423.333;DPRA=0;EPP=96.3836;EPPR=723.939;GTI=0;LEN=1;MEANALT=5.33333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.996988;PAO=0;PQA=0;PQR=0;PRO=0;QA=1459;QR=12595;RO=332;RPL=43;RPP=96.3836;RPPR=723.939;RPR=0;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=332;SRP=723.939;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:57:38,5,7,4:38:1456:5,7,4:176,236,141:-7.70711,-4.82398,-122.884,0,-105.266,-117.463,-7.65697,-112.914,-108.095,-126.014 0|0:100:85,1,9,4:85:3226:1,9,4:35,292,153:0,-22.7431,-287.005,-2.02646,-263.747,-263.88,-13.0127,-274.751,-254.035,-276.389 0|1:62:40,2,16,0:40:1527:2,16,0:78,589,0:-36.1788,-41.804,-166.501,0,-118.94,-120.536,-48.22,-167.103,-125.353,-173.516 0|0:68:52,2,3,5:52:1967:2,3,5:75,106,181:0,-9.7738,-170.455,-7.01283,-162.424,-167.395,-0.861738,-156.284,-153.526,-160.653 0|0:69:53,3,6,0:53:2014:3,6,0:117,173,0:0,-6.31952,-170.639,-2.20947,-157.789,-165.601,-15.9546,-171.542,-167.407,-181.16 0|0:69:64,0,2,0:64:2405:0,2,0:0,63,0:0,-19.2659,-216.476,-14.099,-211.411,-210.809,-19.2659,-216.476,-211.411,-216.476 dDocent_Contig_840 22 . G A 6722.83 . AB=0.348442;ABP=143.867;AC=6;AF=0.5;AN=12;AO=246;CIGAR=1M1X1M1X;DP=706;DPB=702.25;DPRA=0;EPP=537.193;EPPR=954.115;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.357724;PAIREDR=0.285388;PAO=0;PQA=0;PQR=0;PRO=0;QA=9809;QR=17186;RO=438;RPL=0;RPP=537.193;RPPR=954.115;RPR=246;RUN=1;SAF=246;SAP=537.193;SAR=0;SRF=438;SRP=954.115;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:95:63,1,30:63:2492:1,30:41,1190:-78.9791,-94.5595,-299.335,0,-201.679,-196.033 0|1:174:97,10,66:97:3815:10,66:406,2622:-186.644,-182.358,-493.147,0,-280.305,-293.923 0|1:99:67,0,31:67:2620:0,31:0,1235:-81.515,-101.684,-317.066,0,-215.369,-206.037 0|1:90:45,0,45:45:1750:0,45:0,1817:-136.646,-150.192,-293.983,0,-144.186,-130.64 0|1:111:81,2,26:81:3173:2,26:81,1014:-58.9443,-76.6477,-336.943,0,-254.207,-253.06 0|1:137:85,2,48:85:3336:2,48:80,1931:-133.552,-152.549,-426.276,0,-267.736,-259.877 dDocent_Contig_841 7 . T A 4495.57 . AB=0.0295858;ABP=327.845;AC=3;AF=0.25;AN=12;AO=5;CIGAR=1M2X5M;DP=549;DPB=542.25;DPRA=0;EPP=13.8677;EPPR=450.334;GTI=0;LEN=1;MEANALT=5;MQM=37.8;MQMR=55.2184;NS=6;NUMALT=7;ODDS=1.11022e-16;PAIRED=0.4;PAIREDR=0.970874;PAO=0;PQA=0;PQR=0;PRO=0;QA=146;QR=7899;RO=206;RPL=0;RPP=13.8677;RPPR=450.334;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=206;SRP=450.334;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:60:15,0,0,3,18,0,10,13:15:574:0,0,3,18,0,10,13:0,0,107,649,0,359,492:-47.0846,-51.6001,-96.5273,-51.6001,-96.5273,-96.5273,-43.306,-88.2331,-88.2331,-87.33,0,-44.928,-44.928,-36.6344,-39.5094,-51.6001,-96.5273,-96.5273,-88.2331,-44.928,-96.5273,-24.2575,-69.1839,-69.1839,-60.8902,-17.5875,-69.1839,-66.1736,-12.1721,-57.1022,-57.1022,-48.8081,-5.50168,-57.1022,-29.7593,-53.1888 0|0:57:20,6,0,2,0,0,7,18:20:761:6,0,2,0,0,7,18:200,0,74,0,0,240,540:-33.7519,-24.9003,-78.0187,-39.7725,-79.8249,-94.6947,-33.7144,-73.7685,-88.6385,-88.0365,-39.7725,-79.8249,-94.6947,-88.6385,-94.6947,-39.7725,-79.8249,-94.6947,-88.6385,-94.6947,-94.6947,-21.3225,-61.3792,-76.2492,-70.1927,-76.2492,-76.2492,-74.142,0,-40.0525,-54.9192,-48.8629,-54.9192,-54.9192,-36.476,-49.5007 0|1:164:36,0,0,0,87,0,10,23:36:1382:0,0,0,87,0,10,23:0,0,0,3238,0,320,791:-251.245,-262.082,-370.94,-262.082,-370.94,-370.94,-262.082,-370.94,-370.94,-370.94,0,-108.879,-108.879,-108.879,-82.6895,-262.082,-370.94,-370.94,-370.94,-108.879,-370.94,-238.422,-347.28,-347.28,-347.28,-85.2216,-347.28,-344.27,-201.229,-310.086,-310.086,-310.086,-48.0266,-310.086,-286.427,-303.163 0|1:99:48,0,0,4,14,0,7,15:48:1830:0,0,4,14,0,7,15:0,0,141,521,0,269,468:-27.6684,-42.1179,-189.773,-42.1179,-189.773,-189.773,-31.4627,-179.119,-179.119,-177.915,0,-147.669,-147.669,-137.015,-143.455,-42.1179,-189.773,-189.773,-179.119,-147.669,-189.773,-20.8561,-168.517,-168.517,-157.864,-126.413,-168.517,-166.41,-7.25056,-154.903,-154.903,-144.25,-112.8,-154.903,-133.648,-150.388 0|0:57:28,2,3,0,0,3,11,9:28:1074:2,3,0,0,3,11,9:10,21,0,0,85,66,313:-15.1511,-23.6983,-108.626,-23.2946,-108.944,-107.922,-23.5799,-109.228,-108.825,-109.11,-23.5799,-109.228,-108.825,-109.11,-109.11,-17.3628,-103.024,-102.621,-102.906,-102.906,-102.003,-23.4234,-109.06,-108.659,-108.938,-108.938,-102.738,-105.627,0,-85.7159,-85.3131,-85.597,-85.597,-79.392,-85.4341,-82.8877 0|0:112:59,0,3,0,0,2,12,36:59:2278:0,3,0,0,2,12,36:0,39,0,0,61,237,1249:-78.6538,-96.4146,-283.397,-94.5484,-281.526,-280.623,-96.4146,-283.397,-281.526,-283.397,-96.4146,-283.397,-281.526,-283.397,-283.397,-91.7988,-278.782,-276.912,-278.782,-278.782,-278.18,-80.5526,-267.524,-265.655,-267.524,-267.524,-262.909,-263.911,0,-187.087,-185.22,-187.087,-187.087,-182.473,-171.225,-176.25 dDocent_Contig_842 78 . T C 95.8029 . AB=0.12987;ABP=94.6352;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=275;DPB=275;DPRA=0.762821;EPP=29.068;EPPR=574.108;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.25;PAIREDR=0.623574;PAO=0;PQA=0;PQR=0;PRO=0;QA=439;QR=9826;RO=263;RPL=7;RPP=3.73412;RPPR=35.7805;RPR=5;RUN=1;SAF=7;SAP=3.73412;SAR=5;SRF=163;SRP=35.7805;SRR=100;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1503:0:0:0,-12.3422,-135.56 0/1:55:48,7:48:1740:7:249:-6.19883,0,-140.322 0/1:22:19,3:19:719:3:116:-4.19504,0,-58.4185 0/0:42:40,2:40:1529:2:74:0,-5.61749,-130.859 0/0:51:51,0:51:1918:0:0:0,-15.3525,-172.875 0/0:64:64,0:64:2417:0:0:0,-19.2659,-217.749 dDocent_Contig_843 26 . A G 4349.65 . AB=0.047619;ABP=674.926;AC=0;AF=0;AN=12;AO=18;CIGAR=1X1M1X;DP=378;DPB=378;DPRA=0;EPP=42.0968;EPPR=404.733;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.789189;PAO=0;PQA=0;PQR=0;PRO=0;QA=674;QR=7228;RO=185;RPL=0;RPP=42.0968;RPPR=404.733;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=185;SRP=404.733;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:49:35,2,12:35:1343:2,12:67,416:-23.2858,-28.3979,-138.043,0,-104.842,-106.653 0|0:68:37,3,28:37:1426:3,28:114,935:-64.5022,-66.2865,-182.481,0,-107.724,-108.644 0|0:56:29,7,20:29:1136:7,20:267,721:-50.0869,-36.9069,-128.223,0,-71.5104,-87.3922 0|0:54:21,3,30:21:820:3,30:115,1049:-78.9834,-75.8631,-142.381,0,-57.972,-58.3791 0|0:67:29,1,37:29:1142:1,37:39,1287:-95.8604,-101.383,-195.044,0,-90.7394,-82.8071 0|0:84:34,2,48:34:1361:2,48:72,1678:-126.244,-130.604,-242.142,0,-106.285,-97.7074 dDocent_Contig_844 11 . G C 678.779 . AB=0.207792;ABP=117.224;AC=2;AF=0.166667;AN=12;AO=37;CIGAR=1X;DP=417;DPB=417;DPRA=0.958042;EPP=83.3548;EPPR=828.17;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.6053;NS=6;NUMALT=1;ODDS=0;PAIRED=0.810811;PAIREDR=0.926316;PAO=0;PQA=0;PQR=0;PRO=0;QA=1470;QR=15111;RO=380;RPL=0;RPP=83.3548;RPPR=828.17;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=380;SRP=828.17;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:66:66,0:66:2612:0:0:0,-19.868,-235.218 0/0:57:53,4:53:2137:4:158:0,-2.55806,-177.898 0/0:63:62,1:62:2456:1:41:0,-14.8703,-217.089 0/0:77:77,0:77:3076:0:0:0,-23.1793,-275.129 0/1:78:59,19:59:2354:19:763:-45.512,0,-186.5 0/1:76:63,13:63:2476:13:508:-23.1795,0,-199.079 dDocent_Contig_845 22 . C T 1762.55 . AB=0.413333;ABP=12.7964;AC=1;AF=0.0833333;AN=12;AO=63;CIGAR=1X;DP=935;DPB=935;DPRA=0.949527;EPP=139.813;EPPR=1896.53;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2473;QR=34129;RO=872;RPL=0;RPP=139.813;RPPR=1896.53;RPR=63;RUN=1;SAF=63;SAP=139.813;SAR=0;SRF=872;SRP=1896.53;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:162:162,0:162:6390:0:0:0,-48.7669,-574.868 0/0:168:168,0:168:6615:0:0:0,-50.573,-595.118 0/0:178:178,0:178:6882:0:0:0,-53.5833,-619.148 0/0:126:126,0:126:4925:0:0:0,-37.9298,-443.189 0/0:151:150,1:150:5870:1:11:0,-44.3555,-527.049 0/1:150:88,62:88:3447:62:2462:-176.574,0,-265.133 dDocent_Contig_846 32 . G T 98.4214 . AB=0.185185;ABP=26.2531;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=178;DPB=178;DPRA=0.942149;EPP=18.2106;EPPR=374.332;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994152;PAO=0;PQA=0;PQR=0;PRO=0;QA=281;QR=6682;RO=171;RPL=0;RPP=18.2106;RPPR=374.332;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=171;SRP=374.332;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:695:0:0:0,-5.41854,-62.8695 0/0:30:30,0:30:1170:0:0:0,-9.0309,-105.574 0/0:43:43,0:43:1653:0:0:0,-12.9443,-149.008 0/0:30:30,0:30:1173:0:0:0,-9.0309,-105.844 0/1:27:22,5:22:869:5:199:-10.1602,0,-70.3951 0/0:30:28,2:28:1122:2:82:0,-1.25122,-93.4859 dDocent_Contig_848 10 . A T 136.735 . AB=0.12987;ABP=94.6352;AC=1;AF=0.0833333;AN=12;AO=28;CIGAR=1X;DP=387;DPB=387;DPRA=0;EPP=63.8115;EPPR=782.569;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1129;QR=14313;RO=359;RPL=0;RPP=63.8115;RPPR=782.569;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=359;SRP=782.569;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:55,4:55:2202:4:157:0,-3.25288,-183.839 0/0:81:76,5:76:3027:5:203:0,-5.73037,-253.862 0/0:62:60,2:60:2416:2:81:0,-10.9781,-209.897 0/1:77:67,10:67:2664:10:409:-13.9913,0,-216.702 0/0:53:49,4:49:1971:4:161:0,-1.07969,-162.71 0/0:55:52,3:52:2033:3:118:0,-5.55445,-172.157 dDocent_Contig_849 23 . C A 3595.81 . AB=0.19582;ABP=733.545;AC=2;AF=0.166667;AN=12;AO=179;CIGAR=1X;DP=2209;DPB=2209;DPRA=1.261;EPP=391.704;EPPR=4408.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7084;QR=80932;RO=2029;RPL=0;RPP=391.704;RPPR=4408.93;RPR=179;RUN=1;SAF=179;SAP=391.704;SAR=0;SRF=2029;SRP=4408.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:296:295,0:295:11806:0:0:0,-88.8038,-1061.29 0/0:344:344,0:344:13833:0:0:0,-103.554,-1243.9 0/0:323:322,1:322:12818:1:40:0,-93.237,-1148.69 0/0:337:337,0:337:13420:0:0:0,-101.447,-1206.79 0/1:512:392,120:392:15534:120:4763:-274.45,0,-1242.73 0/1:397:339,58:339:13521:58:2281:-85.9449,0,-1096.36 dDocent_Contig_850 83 . G A 33804.8 . AB=0.0683428;ABP=4573.44;AC=3;AF=0.25;AN=12;AO=193;CIGAR=9M2X11M;DP=2824;DPB=3717.73;DPRA=0;EPP=422.104;EPPR=265.758;GTI=0;LEN=1;MEANALT=27.6667;MQM=60;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=1;PAIREDR=1;PAO=546.248;PQA=20234.1;PQR=20234.1;PRO=546.248;QA=6991;QR=4268;RO=121;RPL=193;RPP=422.104;RPPR=265.758;RPR=0;RUN=1;SAF=193;SAP=422.104;SAR=0;SRF=121;SRP=265.758;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:273:20,44,6,0,14,0,92,8,24,26:20:690:44,6,0,14,0,92,8,24,26:1392,219,0,475,0,3263,288,873,940:-315.625,-209.686,-252.48,-303.757,-247.837,-357.995,-321.646,-265.726,-359.801,-377.691,-283.134,-227.215,-321.288,-339.177,-334.963,-321.646,-265.726,-359.801,-377.691,-339.177,-377.691,-55.8941,0,-94.0395,-111.926,-73.4212,-111.926,-84.231,-298.151,-242.232,-336.306,-354.195,-315.682,-354.195,-88.4347,-351.787,-250.355,-194.439,-288.509,-306.398,-267.886,-306.398,-40.6483,-282.903,-299.173,-244.931,-189.015,-283.085,-300.974,-262.462,-300.974,-35.2258,-277.479,-229.684,-293.147 0|0:501:24,25,3,18,27,5,172,34,19,32:24:839:25,3,18,27,5,172,34,19,32:830,114,567,871,179,6046,1228,692,1156:-516.796,-456.876,-517.6,-514.672,-515.777,-582.019,-478.43,-479.535,-537.33,-541.261,-453.791,-454.896,-512.692,-476.45,-513.914,-509.425,-510.53,-568.326,-532.084,-507.445,-576.17,-31.9692,-33.0749,-90.8659,-54.6272,-29.991,-85.6195,-48.4375,-423.8,-424.905,-482.701,-446.459,-421.821,-477.454,0,-481.815,-467.497,-468.602,-526.398,-490.156,-465.518,-521.151,-43.6941,-435.526,-530.028,-429.673,-430.778,-488.574,-452.332,-427.694,-483.327,-5.87273,-397.702,-441.399,-488.29 1|0:321:30,20,0,0,61,2,49,26,18,25:30:1065:20,0,0,61,2,49,26,18,25:652,0,0,2080,64,1810,980,654,918:-220.971,-177.371,-258.11,-230.002,-264.131,-316.763,-230.002,-264.131,-316.763,-316.763,-61.2625,-95.3901,-148.018,-148.018,-129.655,-224.846,-258.976,-311.608,-311.608,-142.863,-311.006,-81.977,-116.105,-168.735,-168.735,0,-163.58,-153.984,-149.7,-183.829,-236.46,-236.46,-67.7195,-231.305,-88.4344,-228.633,-176.598,-210.727,-263.359,-263.359,-94.6168,-258.203,-115.332,-183.056,-257.94,-154.967,-189.096,-241.727,-241.727,-72.9866,-236.572,-93.7015,-161.425,-188.323,-234.201 0|0:555:28,30,15,21,71,6,163,84,21,37:28:987:30,15,21,71,6,163,84,21,37:991,564,691,2337,205,5942,3093,765,1361:-649.446,-577.748,-649.073,-611.667,-611.897,-687.508,-602.029,-602.259,-636.178,-676.064,-469,-469.23,-503.148,-493.511,-527.982,-641.238,-641.468,-675.387,-665.75,-532.719,-719.789,-172.525,-172.756,-206.673,-197.036,-64.0137,-236.244,-203.811,-404.987,-405.217,-439.135,-429.498,-296.47,-468.707,0,-460.056,-595.385,-595.615,-629.534,-619.897,-486.867,-659.106,-190.392,-422.854,-669.42,-546.599,-546.829,-580.748,-571.11,-438.081,-610.32,-141.607,-374.068,-564.466,-615.817 1|0:584:0,0,146,0,0,89,17,184,13,21:0:0:0,146,0,0,89,17,184,13,21:0,5432,0,0,3185,628,6506,465,739:-974.378,-974.378,-974.378,-529.801,-529.801,-485.851,-974.378,-974.378,-529.801,-974.378,-974.378,-974.378,-529.801,-974.378,-974.378,-714.734,-714.734,-270.165,-714.734,-714.734,-687.943,-923.01,-923.01,-478.434,-923.01,-923.01,-663.367,-917.892,-444.552,-444.552,0,-444.552,-444.552,-184.921,-393.185,-389.162,-936.464,-936.464,-491.888,-936.464,-936.464,-676.82,-885.095,-406.639,-932.55,-914.228,-914.228,-469.653,-914.228,-914.228,-654.585,-862.86,-384.404,-876.314,-907.907 1|0:590:19,2,136,55,6,31,121,86,7,52:19:687:2,136,55,6,31,121,86,7,52:68,5119,1808,206,1080,4292,3058,249,1877:-707.258,-707.462,-762.938,-293.562,-344.123,-308.699,-566.877,-617.438,-203.542,-606.397,-696.251,-746.813,-332.913,-606.228,-750.523,-625.173,-675.735,-261.836,-535.15,-664.524,-671.919,-363.33,-413.891,0,-273.31,-402.68,-331.604,-382.982,-463.801,-514.363,-100.468,-373.78,-503.152,-432.075,-170.236,-493.99,-692.687,-743.249,-329.349,-602.663,-732.038,-660.96,-399.116,-499.588,-746.657,-559.794,-610.356,-196.458,-469.771,-599.145,-528.067,-266.226,-366.696,-595.581,-600.218 dDocent_Contig_851 10 . A G 28182.9 . AB=0.171827;ABP=607.312;AC=2;AF=0.166667;AN=12;AO=111;CIGAR=1M1D2M1X2M;DP=1095;DPB=956.857;DPRA=0;EPP=244.044;EPPR=280.959;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4195;QR=4896;RO=128;RPL=0;RPP=244.044;RPPR=280.959;RPR=111;RUN=1;SAF=111;SAP=244.044;SAR=0;SRF=128;SRP=280.959;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:62:19,0,43:19:734:0,43:0,1612:-126.685,-132.405,-192.694,0,-60.672,-47.7277 0|0:136:21,0,115:21:795:0,115:0,4277:-344.08,-350.401,-415.577,0,-65.5524,-30.9339 0|0:126:24,0,101:24:897:0,101:0,3851:-308.783,-316.007,-389.452,0,-73.5256,-43.1216 0|0:125:29,0,95:29:1123:0,95:0,3545:-281.534,-290.264,-382.523,0,-92.32,-63.7222 1|0:312:4,69,238:4:152:69,238:2592,8978:-934.452,-723.318,-715.012,-199.886,0,-140.706 1|0:334:31,42,260:31:1195:42,260:1603,9796:-826.754,-704.569,-790.056,-33.3837,0,-53.2474 dDocent_Contig_852 36 . T C 71.05 . AB=0.135135;ABP=45.7942;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=266;DPB=266;DPRA=1.14793;EPP=18.2106;EPPR=565.422;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.428571;PAIREDR=0.803089;PAO=0;PQA=0;PQR=0;PRO=0;QA=281;QR=10359;RO=259;RPL=0;RPP=18.2106;RPPR=565.422;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=259;SRP=565.422;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:52:52,0:52:2061:0:0:0,-15.6536,-185.674 0/0:60:58,2:58:2311:2:79:0,-10.5642,-200.652 0/0:33:33,0:33:1320:0:0:0,-9.93399,-119.058 0/0:49:49,0:49:1981:0:0:0,-14.7505,-178.475 0/0:35:35,0:35:1392:0:0:0,-10.536,-125.531 0/1:37:32,5:32:1294:5:202:-7.42376,0,-105.585 dDocent_Contig_853 30 . C A 35.8073 . AB=0.0904255;ABP=276.939;AC=2;AF=0.166667;AN=12;AO=28;CIGAR=1X;DP=452;DPB=452;DPRA=1.608;EPP=63.8115;EPPR=923.715;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1098;QR=16887;RO=424;RPL=0;RPP=63.8115;RPPR=923.715;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=424;SRP=923.715;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:53,1:53:2090:1:38:0,-12.4584,-184.488 0/0:111:105,6:105:4220:6:236:0,-11.803,-358.144 0/1:152:139,13:139:5531:13:511:-0.579031,0,-451.856 0/0:49:45,4:45:1801:4:154:0,-0.520153,-148.073 0/1:36:32,4:32:1245:4:159:-3.85436,0,-101.479 0/0:50:50,0:50:2000:0:0:0,-15.0515,-180.191 dDocent_Contig_854 53 . G A 60103.3 . AB=0.698458;ABP=957.126;AC=6;AF=0.5;AN=12;AO=1948;CIGAR=1X;DP=2789;DPB=2789;DPRA=0;EPP=4233.04;EPPR=1827.05;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=76207;QR=32034;RO=840;RPL=1948;RPP=4233.04;RPPR=1827.05;RPR=0;RUN=1;SAF=1948;SAP=4233.04;SAR=0;SRF=840;SRP=1827.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:302:87,215:87:3302:215:8281:-654.01,0,-206.377 0/1:461:129,332:129:4888:332:13092:-1038.61,0,-301.123 0/1:383:97,286:97:3646:286:11217:-893.529,0,-212.92 0/1:429:178,250:178:6867:250:9778:-750.554,0,-488.905 0/1:587:179,408:179:6820:408:15939:-1256.69,0,-436.901 0/1:627:170,457:170:6511:457:17900:-1420.93,0,-397.078 dDocent_Contig_855 79 . G C 4079.85 . AB=0.20873;ABP=931.497;AC=4;AF=0.333333;AN=12;AO=265;CIGAR=1X;DP=1992;DPB=1992;DPRA=0.873854;EPP=578.45;EPPR=3746.63;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=59.9913;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8833;QR=58040;RO=1724;RPL=265;RPP=578.45;RPPR=3746.63;RPR=0;RUN=1;SAF=265;SAP=578.45;SAR=0;SRF=1724;SRP=3746.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:354:250,104:250:8379:104:3481:-206.954,0,-647.627 0/1:383:324,59:324:11006:59:1909:-56.7823,0,-875.242 0/1:237:193,44:193:6442:44:1478:-61.9676,0,-508.571 0/1:286:229,56:229:7666:56:1895:-84.6862,0,-603.894 0/0:371:369,0:369:12465:0:0:0,-111.08,-1121.71 0/0:361:359,2:359:12082:2:70:0,-102.024,-1080.69 dDocent_Contig_856 1 . N G 392.098 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=11;CIGAR=1X;DP=11;DPB=11;DPRA=0;EPP=26.8965;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0.909091;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=417;QR=0;RO=0;RPL=0;RPP=26.8965;RPPR=0;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:6:0,6:0:0:6:223:-20.4233,-1.80618,0 1/1:4:0,4:0:0:4:161:-14.8753,-1.20412,0 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_857 23 . A G 588.574 . AB=0.117526;ABP=619.265;AC=1;AF=0.0833333;AN=12;AO=131;CIGAR=1X;DP=2626;DPB=2626;DPRA=0;EPP=287.473;EPPR=5420.83;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9872;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999599;PAO=0;PQA=0;PQR=0;PRO=0;QA=5186;QR=99809;RO=2495;RPL=0;RPP=287.473;RPPR=5420.83;RPR=131;RUN=1;SAF=131;SAP=287.473;SAR=0;SRF=2495;SRP=5420.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:333:320,13:320:12784:13:475:0,-57.1716,-1106.55 0/0:437:419,18:419:16733:18:727:0,-65.7954,-1438.86 0/0:335:327,8:327:13096:8:294:0,-74.0453,-1150.84 0/0:475:453,22:453:18123:22:883:0,-63.2133,-1549.54 0/1:485:428,57:428:17121:57:2278:-59.1762,0,-1393.5 0/0:561:548,13:548:21952:13:529:0,-120.921,-1925.8 dDocent_Contig_858 69 . T C 34.8701 . AB=0.0927152;ABP=873.267;AC=1;AF=0.0833333;AN=12;AO=224;CIGAR=1X;DP=3836;DPB=3836;DPRA=0;EPP=489.42;EPPR=7824.65;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.996946;PAO=0;PQA=0;PQR=0;PRO=0;QA=8360;QR=117046;RO=3602;RPL=224;RPP=489.42;RPPR=7824.65;RPR=0;RUN=1;SAF=224;SAP=489.42;SAR=0;SRF=3602;SRP=7824.65;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:493:487,4:487:15294:4:97:0,-138.996,-1367.4 0/1:604:548,56:548:17177:56:2060:-3.80563,0,-1363.9 0/0:437:402,34:402:13149:34:1306:0,-13.5083,-1065.43 0/0:537:508,26:508:16374:26:1028:0,-68.141,-1380.59 0/0:699:673,24:673:22184:24:899:0,-128.727,-1914.83 0/0:1066:984,80:984:32868:80:2970:0,-53.1017,-2689.68 dDocent_Contig_859 98 . N T 409.807 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=17;CIGAR=3X;DP=17;DPB=20.6667;DPRA=0;EPP=39.9253;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=5;PQA=71;PQR=0;PRO=0;QA=450;QR=0;RO=0;RPL=17;RPP=39.9253;RPPR=0;RPR=0;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:3:0,3:0:0:3:82:-7.47135,-0.90309,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:14:0,14:0:0:14:368:-33.204,-4.21442,0 dDocent_Contig_860 18 . T A 126.953 . AB=0.138462;ABP=76.807;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X;DP=289;DPB=289;DPRA=1.7931;EPP=50.7827;EPPR=582.793;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=865;QR=10672;RO=267;RPL=0;RPP=50.7827;RPPR=582.793;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=267;SRP=582.793;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:31,4:31:1255:4:159:-4.1557,0,-102.682 0/0:70:64,6:64:2524:6:221:0,-0.832891,-207.058 0/0:85:81,4:81:3233:4:163:0,-10.5291,-275.969 0/0:29:29,0:29:1148:0:0:0,-8.72987,-103.601 0/1:30:25,5:25:1012:5:200:-9.34902,0,-82.343 0/0:40:37,3:37:1500:3:122:0,-0.668707,-123.865 dDocent_Contig_861 138 . A T 135.026 . AB=0.148936;ABP=53.3238;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=5M1X5M;DP=136;DPB=133.545;DPRA=1.03676;EPP=18.2106;EPPR=274.444;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.8;PAO=0;PQA=0;PQR=0;PRO=0;QA=267;QR=4638;RO=125;RPL=0;RPP=18.2106;RPPR=274.444;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=274.444;SRR=125;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:19:19,0,0:19:704:0,0:0,0:0,-5.71957,-63.6915,-5.71957,-63.6915,-63.6915 0|1:33:28,0,5:28:1051:0,5:0,194:-7.89885,-16.3277,-102.415,0,-86.4733,-84.9682 0|1:14:12,0,2:12:446:0,2:0,73:-2.71628,-6.32864,-42.8369,0,-36.874,-36.2719 0|0:26:26,0,0:26:977:0,0:0,0:0,-7.82678,-88.2469,-7.82678,-88.2469,-88.2469 0|0:21:18,3,0:18:657:3,0:116,0:-4.49607,0,-53.1342,-9.91461,-54.0373,-63.5687 0|0:23:22,0,0:22:803:0,0:0,0:0,-6.62266,-72.2312,-6.62266,-72.2312,-72.2312 dDocent_Contig_862 20 . G T 22909.6 . AB=0.0551053;ABP=1063.76;AC=0;AF=0;AN=12;AO=34;CIGAR=2X;DP=994;DPB=994;DPRA=1.99676;EPP=76.8404;EPPR=511.135;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1324;QR=9050;RO=234;RPL=0;RPP=76.8404;RPPR=511.135;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=234;SRP=511.135;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:167:45,9,113:45:1743:9,113:341,4337:-342.372,-327.97,-468.443,0,-115.241,-109.172 0|0:240:62,16,162:62:2380:16,162:631,6362:-504.529,-471.276,-661.803,0,-143.419,-146.571 0|0:127:36,0,91:36:1378:0,91:0,3552:-281.488,-292.325,-405.396,0,-113.456,-86.0623 0|0:210:44,9,157:44:1708:9,157:352,6205:-497.342,-481.65,-619.271,0,-111.391,-93.0676 0|0:147:45,0,102:45:1763:0,102:0,4014:-317.012,-330.559,-475.527,0,-145.36,-114.655 0|0:103:2,0,101:2:78:0,101:0,3987:-351.421,-352.023,-358.434,-23.6028,-30.404,0 dDocent_Contig_863 10 . A T 529.471 . AB=0.167598;ABP=174.799;AC=3;AF=0.25;AN=12;AO=38;CIGAR=1X;DP=349;DPB=349;DPRA=1.00345;EPP=85.5263;EPPR=678.338;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.842105;PAIREDR=0.797428;PAO=0;PQA=0;PQR=0;PRO=0;QA=1520;QR=12451;RO=311;RPL=0;RPP=85.5263;RPPR=678.338;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=311;SRP=678.338;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:41,3:41:1629:3:123:0,-1.78053,-135.378 0/0:68:63,5:63:2525:5:204:0,-1.72601,-208.643 0/0:58:58,0:58:2297:0:0:0,-17.4597,-206.899 0/1:47:37,10:37:1476:10:394:-21.6661,0,-118.942 0/1:75:65,10:65:2628:10:399:-13.6894,0,-214.062 0/1:57:47,10:47:1896:10:400:-19.2007,0,-153.681 dDocent_Contig_864 111 . C T 144.628 . AB=0.388889;ABP=4.9405;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=120;DPB=120;DPRA=0.882353;EPP=18.2106;EPPR=248.387;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.849558;PAO=0;PQA=0;PQR=0;PRO=0;QA=221;QR=3887;RO=113;RPL=0;RPP=18.2106;RPPR=248.387;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=248.387;SRR=113;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:680:0:0:0,-6.0206,-61.5189 0/0:20:20,0:20:685:0:0:0,-6.0206,-61.9703 0/0:27:27,0:27:939:0:0:0,-8.12781,-84.8249 0/0:16:16,0:16:560:0:0:0,-4.81648,-50.7299 0/1:18:11,7:11:380:7:221:-14.7816,0,-29.1141 0/0:19:19,0:19:643:0:0:0,-5.71957,-58.1883 dDocent_Contig_867 17 . C A 551.722 . AB=0.123457;ABP=501.779;AC=1;AF=0.0833333;AN=12;AO=125;CIGAR=1X;DP=1977;DPB=1977;DPRA=1.63907;EPP=274.444;EPPR=4020.23;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999459;PAO=0;PQA=0;PQR=0;PRO=0;QA=4894;QR=73825;RO=1850;RPL=0;RPP=274.444;RPPR=4020.23;RPR=125;RUN=1;SAF=125;SAP=274.444;SAR=0;SRF=1850;SRP=4020.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:297:274,23:274:10914:23:895:0,-8.55018,-900.664 0/1:405:355,50:355:14150:50:1969:-55.491,0,-1150.49 0/0:360:339,20:339:13544:20:768:0,-39.0446,-1148.51 0/0:409:379,30:379:15066:30:1180:0,-16.6418,-1248.29 0/0:215:214,0:214:8577:0:0:0,-64.4204,-771.003 0/0:291:289,2:289:11574:2:82:0,-79.82,-1033.06 dDocent_Contig_868 98 . N G 168.419 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=5.42101e-20;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=168;QR=0;RO=0;RPL=7;RPP=18.2106;RPPR=0;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:2:0,2:0:0:2:51:-4.84431,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:42:-3.9887,-0.60206,0 1/1:2:0,2:0:0:2:41:-3.89396,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_869 12 . G A 183.323 . AB=0.12844;ABP=133.717;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=245;DPB=245;DPRA=1.38462;EPP=39.9253;EPPR=498.106;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.823529;PAIREDR=0.828947;PAO=0;PQA=0;PQR=0;PRO=0;QA=661;QR=9125;RO=228;RPL=0;RPP=39.9253;RPPR=498.106;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=228;SRP=498.106;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:916:0:0:0,-6.92369,-82.742 0/1:59:52,7:52:2113:7:284:-8.17302,0,-172.578 0/0:42:42,0:42:1686:0:0:0,-12.6433,-151.957 0/0:38:37,1:37:1466:1:41:0,-7.34457,-128.092 0/1:50:43,7:43:1723:7:285:-10.9729,0,-140.238 0/0:33:31,2:31:1221:2:51:0,-5.09415,-105.32 dDocent_Contig_870 8 . T C 237.359 . AB=0.121212;ABP=249.769;AC=2;AF=0.166667;AN=12;AO=28;CIGAR=1X;DP=614;DPB=614;DPRA=1.57432;EPP=63.8115;EPPR=1273.32;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1084;QR=22555;RO=585;RPL=0;RPP=63.8115;RPPR=1273.32;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=585;SRP=1273.32;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:60:60,0:60:2296:0:0:0,-18.0618,-206.851 0/0:88:88,0:88:3405:0:0:0,-26.4906,-306.579 0/1:106:91,14:91:3513:14:538:-16.7855,0,-284.312 0/1:92:82,10:82:3143:10:390:-7.76398,0,-255.331 0/0:145:143,2:143:5505:2:78:0,-36.2459,-488.025 0/0:123:121,2:121:4693:2:78:0,-29.6232,-414.994 dDocent_Contig_871 12 . C A 3163.19 . AB=0.170708;ABP=974.046;AC=4;AF=0.333333;AN=12;AO=176;CIGAR=2X;DP=1611;DPB=1611;DPRA=0.888793;EPP=385.189;EPPR=3116.9;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999303;PAO=0;PQA=0;PQR=0;PRO=0;QA=6980;QR=57605;RO=1434;RPL=0;RPP=385.189;RPPR=3116.9;RPR=176;RUN=1;SAF=176;SAP=385.189;SAR=0;SRF=1434;SRP=3116.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:182:165,17:165:6583:17:684:-7.10375,0,-537.402 0|1:357:263,94:263:10566:94:3728:-228.073,0,-842.747 0|1:136:107,29:107:4324:29:1154:-63.1994,0,-348.153 0|1:356:320,36:320:12823:36:1414:-20.3478,0,-1045.95 0|0:316:316,0:316:12766:0:0:0,-95.1255,-1147.96 0|0:264:263,0:263:10543:0:0:0,-79.1709,-948.053 dDocent_Contig_872 23 . C T 4433.29 . AB=0.411141;ABP=28.8664;AC=6;AF=0.5;AN=12;AO=155;CIGAR=1X;DP=377;DPB=377;DPRA=0;EPP=339.589;EPPR=485.077;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.903226;PAIREDR=0.869369;PAO=0;PQA=0;PQR=0;PRO=0;QA=6212;QR=8898;RO=222;RPL=0;RPP=339.589;RPPR=485.077;RPR=155;RUN=1;SAF=155;SAP=339.589;SAR=0;SRF=222;SRP=485.077;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:40:27,13:27:1082:13:529:-35.9154,0,-85.627 0/1:71:42,29:42:1690:29:1177:-84.831,0,-130.949 0/1:50:26,24:26:1045:24:959:-71.5546,0,-79.2868 0/1:50:17,33:17:674:33:1295:-101.755,0,-45.9348 0/1:73:46,27:46:1825:27:1073:-74.8828,0,-142.488 0/1:93:64,29:64:2582:29:1179:-78.3873,0,-204.511 dDocent_Contig_873 20 . C T 65.0315 . AB=0.128205;ABP=49.8362;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=271;DPB=271;DPRA=0.840517;EPP=13.8677;EPPR=580.622;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.962406;PAO=0;PQA=0;PQR=0;PRO=0;QA=202;QR=10757;RO=266;RPL=0;RPP=13.8677;RPPR=580.622;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=266;SRP=580.622;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:38,0:38:1522:0:0:0,-11.4391,-137.215 0/0:60:60,0:60:2437:0:0:0,-18.0618,-219.46 0/0:47:47,0:47:1893:0:0:0,-14.1484,-170.565 0/0:31:31,0:31:1251:0:0:0,-9.33193,-112.854 0/0:56:56,0:56:2277:0:0:0,-16.8577,-205.079 0/1:39:34,5:34:1377:5:202:-6.82191,0,-112.436 dDocent_Contig_874 122 . N C 181.799 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=6;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=8.67362e-19;PAIRED=0.666667;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=181;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,1:0:0:1:35:-3.12887,-0.30103,0 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 1/1:1:0,1:0:0:1:19:-1.89997,-0.30103,0 1/1:1:0,1:0:0:1:24:-2.39989,-0.30103,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_875 76 . C T 161.509 . AB=0.209302;ABP=34.5724;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=191;DPB=191;DPRA=1.47273;EPP=24.725;EPPR=396.047;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.2;PAIREDR=0.883978;PAO=0;PQA=0;PQR=0;PRO=0;QA=358;QR=6484;RO=181;RPL=10;RPP=24.725;RPPR=396.047;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=181;SRP=396.047;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:790:0:0:0,-6.62266,-71.4253 0/0:50:50,0:50:1751:0:0:0,-15.0515,-157.871 0/1:43:34,9:34:1231:9:323:-16.4697,0,-98.148 0/0:38:37,1:37:1348:1:35:0,-7.94051,-118.119 0/0:23:23,0:23:817:0:0:0,-6.92369,-73.846 0/0:15:15,0:15:547:0:0:0,-4.51545,-49.5679 dDocent_Contig_876 30 . G C 4820.2 . AB=0.0404624;ABP=1272.3;AC=5;AF=0.416667;AN=12;AO=28;CIGAR=1M1I6M2X6M1X;DP=1702;DPB=1723.44;DPRA=1.89071;EPP=63.8115;EPPR=2875.87;GTI=0;LEN=1;MEANALT=7;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.999244;PAO=0;PQA=0;PQR=0;PRO=0;QA=947;QR=51042;RO=1323;RPL=0;RPP=63.8115;RPPR=2875.87;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=1323;SRP=2875.87;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:275:221,45,0:221:8485:45,0:1611,0:-64.8468,0,-682.952,-131.374,-696.498,-827.853 0|1:322:255,60,2:255:9867:60,2:2162,79:-99.6086,0,-792.411,-169.869,-803.972,-979.764 0|1:305:257,43,0:257:9929:43,0:1425,0:-37.9441,0,-802.637,-115.309,-815.581,-930.808 0|1:370:271,61,26:271:10443:61,26:2122,868:-90.948,0,-839.154,-102.279,-787.27,-951.952 0|0:183:163,15,0:163:6276:15,0:538,0:0,-5.17815,-515.984,-49.0679,-520.5,-564.373 0|1:247:156,81,0:156:6042:81,0:2927,0:-191.874,0,-471.927,-238.834,-496.31,-735.174 dDocent_Contig_877 77 . G A 497.117 . AB=0.17619;ABP=194.265;AC=2;AF=0.166667;AN=12;AO=37;CIGAR=1X;DP=604;DPB=604;DPRA=1.06599;EPP=83.3548;EPPR=1234.24;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.918919;PAIREDR=0.892416;PAO=0;PQA=0;PQR=0;PRO=0;QA=1254;QR=19264;RO=567;RPL=37;RPP=83.3548;RPPR=1234.24;RPR=0;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=567;SRP=1234.24;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:66:66,0:66:2251:0:0:0,-19.868,-202.86 0/0:102:102,0:102:3496:0:0:0,-30.7051,-314.871 0/0:102:102,0:102:3451:0:0:0,-30.7051,-310.816 0/0:124:124,0:124:4155:0:0:0,-37.3277,-374.157 0/1:109:98,11:98:3349:11:364:-0.266676,0,-268.828 0/1:101:75,26:75:2562:26:890:-50.0095,0,-200.434 dDocent_Contig_878 34 . G T 28304.8 . AB=0.403688;ABP=208.385;AC=2;AF=0.166667;AN=12;AO=1029;CIGAR=1X3M19D1M;DP=4147;DPB=3222.46;DPRA=1.5227;EPP=2237.46;EPPR=5833.44;GTI=0;LEN=1;MEANALT=11.6667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=4.44089e-16;PAIRED=1;PAIREDR=0.999629;PAO=0;PQA=0;PQR=0;PRO=0;QA=37952;QR=105194;RO=2697;RPL=0;RPP=2237.46;RPPR=5833.44;RPR=1029;RUN=1;SAF=1029;SAP=2237.46;SAR=0;SRF=2697;SRP=5859.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:392:318,0,37,14:318:12407:0,37,14:0,1274,560:-7.72122,-103.449,-1123.32,0,-1019.88,-1008.74,-57.3071,-1077.19,-973.746,-1072.98 0|0:536:458,2,3,42:458:17832:2,3,42:75,104,1691:-1.5193,-133.248,-1598.15,-130.939,-1590.3,-1595.54,0,-1459.38,-1457.07,-1452.88 0|0:558:449,0,30,32:449:17481:0,30,32:0,1002,1262:0,-135.162,-1571.82,-54.0849,-1490.73,-1481.7,-31.3304,-1468,-1386.91,-1458.36 0|0:648:537,0,60,15:537:20907:0,60,15:0,2091,599:-8.33815,-169.991,-1888.22,0,-1718.21,-1700.15,-120.656,-1838.89,-1668.88,-1834.37 0|1:975:382,583,1,2:382:14992:583,1,2:21462,8,74:-1639.89,0,-1057.59,-1754.46,-1232.67,-2987.14,-1748.83,-1227.04,-2981.39,-2981.2 0|1:1038:553,444,4,7:553:21575:444,4,7:16415,125,286:-1176.2,0,-1639.78,-1332.63,-1763.4,-3104.87,-1319.07,-1749.84,-3082.48,-3090.4 dDocent_Contig_879 98 . N C 322.005 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=12;CIGAR=1X;DP=12;DPB=12;DPRA=0;EPP=29.068;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=340;QR=0;RO=0;RPL=12;RPP=29.068;RPPR=0;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:104:-9.70309,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:44:-4.17869,-0.60206,0 1/1:1:0,1:0:0:1:12:-1.19999,-0.30103,0 1/1:6:0,6:0:0:6:180:-16.4949,-1.80618,0 dDocent_Contig_880 19 . T C 54611.5 . AB=0.0580808;ABP=2018.2;AC=0;AF=0;AN=12;AO=71;CIGAR=1M2D8M1X6M;DP=2275;DPB=2139.78;DPRA=0;EPP=157.185;EPPR=237.529;GTI=0;LEN=1;MEANALT=11.5;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=0.971831;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2530;QR=4096;RO=108;RPL=0;RPP=157.185;RPPR=237.529;RPR=71;RUN=1;SAF=71;SAP=157.185;SAR=0;SRF=108;SRP=237.529;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:299:23,5,0,228,15,16:23:870:5,0,228,15,16:185,0,8497,545,589:-688.676,-680.465,-750.277,-695.6,-751.782,-766.917,0,-56.1989,-71.3366,-2.70176,-651.094,-707.277,-722.412,-26.8237,-717.896,-647.44,-703.622,-718.758,-23.1677,-674.252,-713.941 0|0:352:19,13,1,265,45,2:19:718:13,1,265,45,2:459,32,9793,1636,54:-870.057,-838.402,-893.342,-873.198,-894.677,-931.75,-74.7586,-96.2435,-131.041,-53.8459,-742.174,-763.653,-798.449,0,-787.48,-871.52,-892.999,-927.795,-129.364,-796.771,-929.771 0|0:381:16,12,0,285,62,1:16:611:12,0,285,62,1:429,0,10628,2303,39:-1003.58,-973.418,-1019.93,-1008.39,-1023.55,-1058.52,-138.35,-153.508,-188.482,-102.689,-819.926,-835.081,-870.055,0,-851.392,-1005.19,-1020.34,-1055.32,-185.276,-866.849,-1055.01 0|0:407:15,21,2,321,25,14:15:564:21,2,321,25,14:775,63,11853,915,522:-1015.33,-956.466,-996.351,-1014.78,-997.607,-1060.39,-50.4205,-33.2463,-91.5649,0,-945.072,-927.898,-986.212,-21.8518,-983.753,-977.112,-959.938,-1018.25,-53.8931,-948.544,-1019.1 0|0:453:19,0,36,328,42,0:19:715:0,36,328,42,0:0,1256,12290,1574,0:-1071.21,-1076.93,-1135.51,-974.792,-1033.37,-1022.53,-70.3435,-128.925,-26.7885,-30.1872,-948.013,-1006.59,-904.452,0,-993.949,-1076.93,-1135.51,-1033.37,-128.925,-1006.59,-1135.51 0|0:383:16,31,32,251,36,0:16:618:31,32,251,36,0:1139,1179,9355,1291,0:-815.495,-727.199,-768.624,-723.899,-681.544,-765.024,-54.5178,-12.1642,-8.86461,-29.7186,-715.032,-672.677,-669.378,0,-754.952,-820.311,-777.956,-774.657,-105.277,-765.79,-871.068 dDocent_Contig_881 66 . C A 56980.7 . AB=0.614956;ABP=352.982;AC=6;AF=0.5;AN=12;AO=1875;CIGAR=1X;DP=3049;DPB=3049;DPRA=0;EPP=4074.52;EPPR=2552.32;GTI=0;LEN=1;MEANALT=1;MQM=59.9856;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998933;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=73608;QR=41128;RO=1174;RPL=1875;RPP=4074.52;RPPR=2552.32;RPR=0;RUN=1;SAF=1875;SAP=4074.52;SAR=0;SRF=1174;SRP=2552.32;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:483:187,296:187:6510:296:11644:-901.819,0,-440.549 0/1:538:215,323:215:7552:323:12516:-963.675,0,-517.69 0/1:306:97,209:97:3521:209:8221:-647.369,0,-224.952 0/1:459:232,227:232:8186:227:8886:-661.097,0,-598.491 0/1:708:165,543:165:5792:543:21396:-1710.83,0,-308.221 0/1:555:278,277:278:9567:277:10945:-817.271,0,-693.885 dDocent_Contig_882 34 . T A 86.9125 . AB=0.172414;ABP=30.0414;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=176;DPB=176;DPRA=0.986395;EPP=13.8677;EPPR=372.161;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.864706;PAO=0;PQA=0;PQR=0;PRO=0;QA=193;QR=6767;RO=170;RPL=0;RPP=13.8677;RPPR=372.161;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=170;SRP=372.161;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:752:0:0:0,-5.71957,-68.0035 0/0:36:36,0:36:1407:0:0:0,-10.8371,-126.88 0/0:34:34,0:34:1368:0:0:0,-10.235,-123.371 0/1:29:24,5:24:961:5:193:-9.01001,0,-78.0628 0/0:26:26,0:26:1035:0:0:0,-7.82678,-93.4388 0/0:32:31,0:31:1244:0:0:0,-9.33193,-111.823 dDocent_Contig_883 7 . C T 14120.3 . AB=0.26056;ABP=1193.66;AC=6;AF=0.5;AN=12;AO=623;CIGAR=1X;DP=2391;DPB=2391;DPRA=0;EPP=1355.84;EPPR=3835.66;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999433;PAO=0;PQA=0;PQR=0;PRO=0;QA=23721;QR=67873;RO=1765;RPL=0;RPP=1355.84;RPPR=3835.66;RPR=623;RUN=1;SAF=623;SAP=1355.84;SAR=0;SRF=1765;SRP=3835.66;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:327:263,64:263:10043:64:2472:-124.245,0,-805.093 0/1:439:328,110:328:12605:110:4172:-243.606,0,-1001.96 0/1:249:212,37:212:8156:37:1407:-51.9552,0,-658.868 0/1:479:414,64:414:15945:64:2442:-75.9905,0,-1290.26 0/1:507:287,219:287:11048:219:8306:-594.626,0,-841.171 0/1:390:261,129:261:10076:129:4922:-325.604,0,-789.069 dDocent_Contig_884 18 . G T 6328.03 . AB=0.362949;ABP=89.315;AC=6;AF=0.5;AN=12;AO=192;CIGAR=1X4M;DP=529;DPB=529;DPRA=0;EPP=419.933;EPPR=528.507;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.932292;PAIREDR=0.917355;PAO=0;PQA=0;PQR=0;PRO=0;QA=7645;QR=9590;RO=242;RPL=0;RPP=419.933;RPPR=528.507;RPR=192;RUN=1;SAF=192;SAP=419.933;SAR=0;SRF=242;SRP=528.507;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:69:29,6,34:29:1159:6,34:238,1355:-102.851,-91.9898,-185.649,0,-75.8771,-85.2328 0|1:105:52,7,44:52:2057:7,44:283,1749:-128.332,-120.652,-287.825,0,-145.946,-156.034 0|1:67:26,5,36:26:1039:5,36:170,1449:-111.641,-105.689,-189.763,0,-71.8527,-74.7925 0|1:80:26,22,32:26:1027:22,32:858,1266:-96.3503,-33.6648,-111.548,0,-13.9965,-74.8758 0|1:118:66,38,13:66:2590:38,13:1498,523:-103.367,0,-201.544,-80.1325,-169.881,-289.208 0|1:90:43,14,33:43:1718:14,33:561,1303:-94.2587,-60.9829,-198.278,0,-95.2876,-131.572 dDocent_Contig_885 98 . N G 104.975 . AB=0;ABP=0;AC=8;AF=0.8;AN=10;AO=5;CIGAR=1X;DP=6;DPB=6;DPRA=1.25;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=100;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:20:-1.99996,-0.30103,0 1/1:1:0,1:0:0:1:5:-0.499999,-0.30103,0 0/0:1:0,0:0:0:0:0:0,0,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:1:0,1:0:0:1:5:-0.499999,-0.30103,0 dDocent_Contig_886 44 . G A 114.922 . AB=0.129032;ABP=77.1206;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=2M1X7M;DP=388;DPB=383.8;DPRA=0.953846;EPP=20.3821;EPPR=795.598;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.827397;PAO=0;PQA=0;PQR=0;PRO=0;QA=313;QR=13978;RO=365;RPL=0;RPP=20.3821;RPPR=795.598;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=365;SRP=795.598;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:54:54,0,0:54:2035:0,0:0,0:0,-16.2556,-183.382,-16.2556,-183.382,-183.382 0|0:84:84,0,0:84:3204:0,0:0,0:0,-25.2865,-288.505,-25.2865,-288.505,-288.505 0|1:62:49,5,8:49:1901:5,8:197,313:-10.9805,-9.52229,-164.202,0,-139.974,-153.774 0|0:66:59,6,0:59:2250:6,0:230,0:-1.3034,0,-182.984,-19.0642,-184.79,-203.664 0|0:53:50,3,0:50:1922:3,0:117,0:0,-5.04438,-162.301,-15.0515,-163.204,-172.822 0|0:69:69,0,0:69:2666:0,0:0,0:0,-20.7711,-240.112,-20.7711,-240.112,-240.112 dDocent_Contig_887 30 . C A 5789.71 . AB=0.250507;ABP=536.109;AC=2;AF=0.166667;AN=12;AO=372;CIGAR=2X;DP=3386;DPB=3386;DPRA=0;EPP=810.798;EPPR=6545.66;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=14703;QR=119414;RO=3013;RPL=0;RPP=810.798;RPPR=6545.66;RPR=372;RUN=1;SAF=372;SAP=810.798;SAR=0;SRF=3013;SRP=6545.66;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:342:249,93:249:9811:93:3681:-228.371,0,-779.467 0|1:644:489,154:489:19410:154:6062:-351.413,0,-1551.38 0|0:621:598,23:598:23674:23:931:0,-102.846,-2044.6 0|0:445:425,20:425:16752:20:813:0,-60.4733,-1432.96 0|0:691:658,33:658:26149:33:1269:0,-93.5301,-2236.72 0|0:643:594,49:594:23618:49:1947:0,-18.1302,-1948.22 dDocent_Contig_888 7 . T A 2542.77 . AB=0.0160116;ABP=1400.8;AC=0;AF=0;AN=12;AO=28;CIGAR=2X;DP=2149;DPB=2149;DPRA=0.8883;EPP=63.8115;EPPR=4074.59;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.980434;PAO=0;PQA=0;PQR=0;PRO=0;QA=1068;QR=72063;RO=1891;RPL=0;RPP=63.8115;RPPR=4109.26;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=1887;SRP=4074.59;SRR=4;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:319:284,17,18:284:10807:17,18:642,690:0,-32.876,-914.146,-28.8573,-862.631,-909.831 0|0:416:361,10,45:361:13762:10,45:387,1731:-33.443,-110.324,-1236.25,0,-1097.15,-1115.39 0|0:271:232,1,38:232:8857:1,38:39,1464:-50.37,-117.003,-843.365,0,-723.452,-715.218 0|0:408:379,0,28:379:14446:0,28:0,1076:0,-114.09,-1299.12,-25.5414,-1210.78,-1202.36 0|0:388:304,0,84:304:11586:0,84:0,3208:-172.074,-263.587,-1214,0,-950.793,-925.507 0|0:347:331,0,12:331:12605:0,12:0,458:0,-99.6409,-1133.57,-62.066,-1095.99,-1092.38 dDocent_Contig_889 12 . G A 54466 . AB=0.539265;ABP=47.8591;AC=6;AF=0.5;AN=12;AO=1806;CIGAR=1X;DP=3349;DPB=3349;DPRA=0;EPP=3924.69;EPPR=3351.42;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=1;PAIREDR=0.999351;PAO=0;PQA=0;PQR=0;PRO=0;QA=71820;QR=61387;RO=1542;RPL=0;RPP=3924.69;RPPR=3351.42;RPR=1806;RUN=1;SAF=1806;SAP=3924.69;SAR=0;SRF=1542;SRP=3351.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:452:289,163:289:11515:163:6476:-446.512,0,-899.496 0/1:581:328,253:328:13053:253:10034:-727.543,0,-998.922 0/1:383:219,163:219:8765:163:6526:-471.657,0,-672.935 0/1:467:296,171:296:11754:171:6828:-473.63,0,-916.468 0/1:704:157,547:157:6238:547:21706:-1739.81,0,-349.261 0/1:762:253,509:253:10062:509:20250:-1591.45,0,-675.539 dDocent_Contig_890 56 . T C 7307.37 . AB=0.335849;ABP=189.077;AC=4;AF=0.333333;AN=12;AO=291;CIGAR=7M1I1X1M;DP=1491;DPB=1479.33;DPRA=0.835417;EPP=634.909;EPPR=2419.86;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.993127;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11571;QR=43146;RO=1113;RPL=291;RPP=634.909;RPPR=2419.86;RPR=0;RUN=1;SAF=291;SAP=634.909;SAR=0;SRF=1113;SRP=2419.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:216:104,105,7:104:4027:105,7:4155,230:-310.696,0,-299.243,-323.427,-312.274,-652.112 0|1:215:125,56,25:125:4887:56,25:2232,900:-146.189,0,-384.939,-110.405,-328.378,-504.655 0|1:145:104,35,0:104:4031:35,0:1410,0:-84.9303,0,-320.621,-116.237,-331.157,-447.373 0|1:219:136,71,2:136:5232:71,2:2821,41:-191.327,0,-408.172,-229.184,-426.461,-658.094 0|0:408:362,24,18:362:14055:24,18:953,613:0,-30.4813,-1178.13,-59.2625,-1135.64,-1208.67 0|0:288:282,0,5:282:10914:0,5:0,176:0,-84.8905,-981.44,-70.4044,-967.114,-965.609 dDocent_Contig_891 8 . G A 531.146 . AB=0.263158;ABP=49.2969;AC=1;AF=0.0833333;AN=12;AO=59;CIGAR=1X;DP=951;DPB=951;DPRA=0.632143;EPP=131.127;EPPR=1939.96;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997758;PAO=0;PQA=0;PQR=0;PRO=0;QA=2199;QR=34084;RO=892;RPL=0;RPP=131.127;RPPR=1939.96;RPR=59;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=892;SRP=1939.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:18,1:18:673:1:35:0,-2.22094,-57.4024 0/0:53:53,0:53:2042:0:0:0,-15.9546,-184.011 0/0:41:40,1:40:1520:1:34:0,-8.94332,-133.674 0/1:95:70,25:70:2661:25:908:-53.4333,0,-211.079 0/0:376:344,32:344:13178:32:1222:0,-2.91042,-1075.16 0/0:367:367,0:367:14010:0:0:0,-110.478,-1260.28 dDocent_Contig_892 54 . C T 2794.38 . AB=0.284987;ABP=160.821;AC=5;AF=0.416667;AN=12;AO=114;CIGAR=1X;DP=428;DPB=428;DPRA=0;EPP=201.186;EPPR=674.023;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.482456;PAIREDR=0.916933;PAO=0;PQA=0;PQR=0;PRO=0;QA=4521;QR=12389;RO=313;RPL=111;RPP=225.186;RPPR=656.873;RPR=3;RUN=1;SAF=105;SAP=178.557;SAR=9;SRF=309;SRP=648.382;SRR=4;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:27,6:27:1088:6:238:-11.8599,0,-88.2729 0/1:41:31,10:31:1214:10:402:-24.1953,0,-97.187 0/1:41:36,5:36:1453:5:204:-6.4018,0,-118.674 0/0:35:33,2:33:1331:2:82:0,-2.75637,-112.272 0/1:145:102,42:102:3984:42:1675:-107.219,0,-314.789 0/1:133:84,49:84:3319:49:1920:-132.964,0,-258.741 dDocent_Contig_893 32 . A T 5285.2 . AB=0.228764;ABP=665.024;AC=4;AF=0.333333;AN=12;AO=237;CIGAR=1X;DP=1529;DPB=1529;DPRA=1.05071;EPP=517.649;EPPR=2808.55;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.989164;PAO=0;PQA=0;PQR=0;PRO=0;QA=9357;QR=51023;RO=1292;RPL=0;RPP=517.649;RPPR=2808.55;RPR=237;RUN=1;SAF=237;SAP=517.649;SAR=0;SRF=1292;SRP=2808.55;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:304:213,91:213:8389:91:3630:-235.222,0,-663.084 0/1:326:265,61:265:10422:61:2365:-114.881,0,-839.245 0/1:204:138,66:138:5427:66:2604:-173.087,0,-426.889 0/1:202:183,19:183:7267:19:758:-7.73474,0,-592.909 0/0:263:263,0:263:10453:0:0:0,-79.1709,-940.131 0/0:230:230,0:230:9065:0:0:0,-69.2369,-815.372 dDocent_Contig_894 14 . A T 26740.4 . AB=0.0516564;ABP=3112.58;AC=0;AF=0;AN=12;AO=92;CIGAR=1M2D1X17M;DP=3001;DPB=3179.19;DPRA=0;EPP=202.786;EPPR=934.572;GTI=0;LEN=1;MEANALT=50.5;MQM=60;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=1;PAIREDR=1;PAO=1.9;PQA=13.3;PQR=28.8714;PRO=2.47143;QA=3669;QR=15801;RO=429;RPL=0;RPP=202.786;RPPR=934.572;RPR=92;RUN=1;SAF=92;SAP=202.786;SAR=0;SRF=429;SRP=934.572;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:507:161,2,45,36,0,2,48,70,9,0:161:5934:2,45,36,0,2,48,70,9,0:81,1786,1430,0,75,1882,2708,362,0:-173.942,-215.728,-700.379,-75.3754,-553.953,-547.087,-104.673,-583.25,-442.901,-579.092,-222.408,-700.981,-560.633,-589.929,-707.66,-216.265,-694.838,-554.49,-583.786,-701.517,-700.915,-67.637,-546.215,-405.866,-435.162,-552.895,-546.752,-538.445,0,-478.581,-338.231,-367.528,-485.261,-479.117,-330.493,-464.188,-192.573,-671.147,-530.798,-560.095,-677.826,-671.683,-523.06,-455.426,-675.117,-222.408,-700.981,-560.633,-589.929,-707.66,-701.517,-552.895,-485.261,-677.826,-707.66 0|0:522:93,51,20,24,2,33,60,70,10,3:93:3403:51,20,24,2,33,60,70,10,3:2043,798,951,78,1290,2293,2763,390,122:-199.334,-59.018,-321.748,-161.608,-271.378,-433.669,-149.051,-258.822,-361.41,-419.908,-220.919,-330.689,-433.278,-420.722,-498.398,-121.276,-231.046,-333.635,-321.079,-392.947,-389.424,-39.2123,-148.983,-251.572,-239.016,-310.883,-211.24,-299.233,0,-109.771,-212.36,-199.804,-271.672,-172.029,-89.9648,-257.011,-195.275,-305.046,-407.634,-395.078,-466.945,-367.303,-285.24,-246.028,-470.346,-217.267,-327.037,-429.626,-417.069,-488.937,-389.294,-307.231,-268.019,-463.293,-494.445 0|0:350:58,20,37,39,0,44,28,41,11,0:58:2175:20,37,39,0,44,28,41,11,0:809,1474,1552,0,1720,1107,1626,427,0:-123.951,-74.7062,-246.832,-20.0274,-131.471,-187.036,-13.616,-125.059,-70.3804,-180.023,-141.41,-252.853,-198.175,-191.763,-319.556,0,-111.443,-56.7644,-50.353,-178.147,-164.902,-50.3071,-161.75,-107.071,-100.66,-228.454,-87.044,-220.025,-7.56627,-119.009,-64.3307,-57.9193,-185.714,-44.3032,-94.6103,-173.371,-106.329,-217.772,-163.093,-156.682,-284.475,-143.066,-193.373,-150.632,-281.164,-141.41,-252.853,-198.175,-191.763,-319.556,-178.147,-228.454,-185.714,-284.475,-319.556 0|0:402:50,19,45,40,0,9,13,79,9,0:50:1823:19,45,40,0,9,13,79,9,0:736,1784,1586,0,356,505,3140,358,0:-243.47,-198.069,-341.265,-111.672,-200.136,-247.041,-127.965,-216.429,-130.031,-264.84,-258.521,-346.984,-260.588,-276.881,-407.436,-229.221,-317.684,-231.288,-247.581,-378.136,-375.427,-217.026,-305.489,-219.093,-235.386,-365.941,-336.641,-362.028,0,-88.4647,-2.06562,-18.3595,-148.918,-119.617,-107.422,-125.136,-229.043,-317.506,-231.11,-247.403,-377.958,-348.658,-336.463,-119.439,-375.249,-258.521,-346.984,-260.588,-276.881,-407.436,-378.136,-365.941,-148.918,-377.958,-407.436 0|0:602:41,0,0,0,213,10,6,193,31,1:41:1502:0,0,0,213,10,6,193,31,1:0,0,0,8448,395,239,7619,1241,41:-1187.23,-1199.58,-1322.32,-1199.58,-1322.32,-1322.32,-1199.58,-1322.32,-1322.32,-1322.32,-504.153,-626.905,-626.905,-626.905,-562.785,-1167.07,-1289.82,-1289.82,-1289.82,-594.401,-1286.81,-1179.89,-1302.64,-1302.64,-1302.64,-607.223,-1270.14,-1300.84,-572.699,-695.45,-695.45,-695.45,0,-662.946,-675.768,-637.351,-1097.34,-1220.09,-1220.09,-1220.09,-524.671,-1187.59,-1200.41,-593.216,-1210.76,-1196.19,-1318.94,-1318.94,-1318.94,-623.52,-1286.44,-1299.26,-692.065,-1216.71,-1318.64 0|0:618:26,0,11,11,129,38,0,128,79,46:26:964:0,11,11,129,38,0,128,79,46:0,441,433,5101,1497,0,5067,3115,1795:-750.104,-757.93,-836.804,-721.595,-800.468,-797.157,-722.309,-801.182,-764.847,-797.871,-338.139,-417.013,-380.677,-381.391,-378.18,-634.776,-713.649,-677.314,-678.028,-293.857,-702.21,-757.93,-836.804,-800.468,-801.182,-417.013,-713.649,-836.804,-340.925,-419.799,-383.463,-384.178,0,-296.643,-419.799,-381.268,-501.65,-580.523,-544.188,-544.902,-160.728,-457.368,-580.523,-163.515,-556.742,-610.384,-689.257,-652.922,-653.636,-269.464,-566.102,-689.257,-272.251,-432.976,-675.41 dDocent_Contig_897 98 . N T 277.362 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=287;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:135:-12.4836,-1.20412,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:99:-9.23746,-0.90309,0 1/1:1:0,1:0:0:1:19:-1.89997,-0.30103,0 dDocent_Contig_898 98 . N T 395.229 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=17;CIGAR=1X;DP=17;DPB=17;DPRA=0;EPP=39.9253;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=57.7059;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=419;QR=0;RO=0;RPL=17;RPP=39.9253;RPPR=0;RPR=0;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:54:-4.99353,-0.90309,0 1/1:4:0,4:0:0:4:83:-7.67679,-1.20412,0 1/1:2:0,2:0:0:2:55:-5.22366,-0.60206,0 1/1:2:0,2:0:0:2:35:-3.32495,-0.60206,0 1/1:6:0,6:0:0:6:192:-17.5953,-1.80618,0 dDocent_Contig_899 46 . T C 20080.6 . AB=0.550602;ABP=21.4704;AC=7;AF=0.583333;AN=12;AO=650;CIGAR=1X;DP=1033;DPB=1033;DPRA=0;EPP=1414.47;EPPR=834.684;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=25529;QR=15257;RO=383;RPL=0;RPP=1414.47;RPPR=834.684;RPR=650;RUN=1;SAF=650;SAP=1414.47;SAR=0;SRF=383;SRP=834.684;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:146:69,77:69:2761:77:3033:-229.119,0,-204.651 0/1:133:64,69:64:2555:69:2681:-201.383,0,-190.052 0/1:145:76,69:76:3031:69:2720:-201.276,0,-229.225 0/1:223:135,88:135:5351:88:3474:-245.593,0,-414.318 1/1:203:10,193:10:400:193:7570:-644.598,-24.7519,0 0/1:183:29,154:29:1159:154:6051:-489.29,0,-49.4985 dDocent_Contig_900 110 . A C 481.238 . AB=0.264706;ABP=52.06;AC=2;AF=0.166667;AN=12;AO=27;CIGAR=1X;DP=230;DPB=230;DPRA=1.59375;EPP=61.6401;EPPR=441.648;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.975248;PAO=0;PQA=0;PQR=0;PRO=0;QA=878;QR=6838;RO=202;RPL=0;RPP=61.6401;RPPR=441.648;RPR=27;RUN=1;SAF=0;SAP=61.6401;SAR=27;SRF=0;SRP=441.648;SRR=202;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:22,0:22:716:0:0:0,-6.62266,-64.6647 0/0:29:29,0:29:1000:0:0:0,-8.72987,-90.3121 0/0:30:30,0:30:1017:0:0:0,-9.0309,-91.8344 0/0:46:46,0:46:1550:0:0:0,-13.8474,-139.79 0/1:50:39,11:39:1324:11:347:-16.485,0,-104.404 0/1:52:36,16:36:1231:16:531:-32.4524,0,-95.4394 dDocent_Contig_901 13 . T C 132023 . AB=0.236436;ABP=3328.2;AC=11;AF=0.916667;AN=12;AO=1303;CIGAR=1X3M;DP=5511;DPB=5511;DPRA=0;EPP=2832.44;EPPR=1438.35;GTI=0;LEN=1;MEANALT=4.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.998465;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=51857;QR=26253;RO=661;RPL=0;RPP=2832.44;RPPR=1438.35;RPR=1303;RUN=1;SAF=1303;SAP=2832.44;SAR=0;SRF=661;SRP=1438.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:801:36,541,200:36:1427:541,200:21503,7898:-2291.88,-532.377,-486.976,-1652.89,0,-1710.14 1|1:1054:1,837,172:1:40:837,172:33193,6855:-3293.09,-561.172,-312.505,-2728.93,0,-2680.45 1|1:658:24,473,121:24:962:473,121:18625,4847:-1844.9,-320.032,-256.904,-1452.83,0,-1495.67 1|1:900:97,544,235:97:3866:544,235:21518,9360:-2193.92,-452.336,-606.935,-1452.42,0,-1700.04 0|1:1166:322,574,265:322:12794:574,265:22742,10550:-1774.88,0,-880.496,-1003.18,-184.664,-1976.7 1|1:932:181,440,310:181:7164:440,310:17435,12347:-1807.59,-427.051,-884.186,-845.441,0,-1341.71 dDocent_Contig_902 22 . T G 173324 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=5060;CIGAR=1M3D1X3M2X2M1X;DP=5313;DPB=4114.23;DPRA=0;EPP=10990.7;EPPR=276.616;GTI=0;LEN=1;MEANALT=7.5;MQM=59.9816;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=197721;QR=4958;RO=126;RPL=0;RPP=10990.7;RPPR=276.616;RPR=5060;RUN=1;SAF=5060;SAP=10990.7;SAR=0;SRF=126;SRP=276.616;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:761:14,736:14:548:736:28720:-2533.07,-176.502,0 1|1:992:46,886:46:1818:886:34630:-2949.66,-117.104,0 1|1:598:42,547:42:1652:547:21427:-1778.04,-28.7515,0 1|1:878:17,827:17:665:827:32251:-2840.07,-194.276,0 1|1:1033:0,1027:0:0:1027:40093:-3604.94,-309.158,0 1|1:1051:7,1037:7:275:1037:40600:-3625.77,-289.529,0 dDocent_Contig_903 37 . T G 162722 . AB=0.908907;ABP=1437.91;AC=11;AF=0.916667;AN=12;AO=4753;CIGAR=1X4M;DP=5054;DPB=5025.6;DPRA=0;EPP=10324;EPPR=469.877;GTI=0;LEN=1;MEANALT=3.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.22045e-16;PAIRED=0.999158;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=189195;QR=8447;RO=215;RPL=0;RPP=10324;RPPR=469.877;RPR=4753;RUN=1;SAF=4753;SAP=10324;SAR=0;SRF=215;SRP=469.877;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:652:19,0,631:19:731:0,631:0,25110:-2191.64,-2197.36,-2257.37,-129.949,-189.95,0 1|1:772:18,0,750:18:708:0,750:0,29757:-2611.5,-2616.92,-2675.16,-167.51,-225.773,0 1|1:773:12,0,757:12:477:0,757:0,30085:-2661.7,-2665.32,-2704.59,-188.539,-227.88,0 1|1:807:21,0,785:21:824:0,785:0,31440:-2752.24,-2758.56,-2826.33,-168.55,-236.309,0 0|1:988:90,0,898:90:3564:0,898:0,35649:-2907.8,-2934.9,-3228.24,0,-293.735,-23.4104 1|1:1062:55,71,932:55:2143:71,932:2708,37154:-3147.38,-2941.79,-3096.55,-104.419,-58.4143,0 dDocent_Contig_904 1 . N G 711.99 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=27;CIGAR=1X;DP=27;DPB=27;DPRA=0;EPP=61.6401;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=30.1111;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1061;QR=0;RO=0;RPL=0;RPP=61.6401;RPPR=0;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:41:-3.68758,-0.30103,0 1/1:6:0,6:0:0:6:240:-20.3235,-1.80618,0 1/1:5:0,5:0:0:5:194:-16.635,-1.50515,0 ./.:.:.:.:.:.:.:. 1/1:12:0,12:0:0:12:469:-26.2098,-3.61236,0 1/1:3:0,3:0:0:3:117:-3.63489,-0.90309,0 dDocent_Contig_905 40 . G A 7074.59 . AB=0.248227;ABP=701.716;AC=2;AF=0.166667;AN=12;AO=315;CIGAR=1X;DP=3333;DPB=3333;DPRA=1.22965;EPP=687.024;EPPR=6556.51;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.998343;PAO=0;PQA=0;PQR=0;PRO=0;QA=12117;QR=117214;RO=3018;RPL=0;RPP=687.024;RPPR=6556.51;RPR=315;RUN=1;SAF=315;SAP=687.024;SAR=0;SRF=3018;SRP=6556.51;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:552:552,0:552:21327:0:0:0,-166.169,-1917.98 0/0:670:670,0:670:26064:0:0:0,-201.69,-2343.85 0/0:322:322,0:322:12551:0:0:0,-96.9317,-1128.86 0/0:520:520,0:520:20159:0:0:0,-156.536,-1812.94 0/1:804:547,257:547:21250:257:9898:-648.337,0,-1669.02 0/1:465:407,58:407:15863:58:2219:-59.9353,0,-1286.66 dDocent_Contig_906 64 . G T 1284.85 . AB=0.247273;ABP=155.574;AC=4;AF=0.333333;AN=12;AO=69;CIGAR=1X;DP=399;DPB=399;DPRA=1.02769;EPP=152.842;EPPR=719.596;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.608696;PAIREDR=0.539394;PAO=0;PQA=0;PQR=0;PRO=0;QA=2391;QR=11704;RO=330;RPL=69;RPP=152.842;RPPR=719.596;RPR=0;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=330;SRP=719.596;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:39:25,14:25:860:14:484:-32.144,0,-65.961 0/1:96:82,14:82:2840:14:497:-16.1626,0,-226.903 0/1:48:37,11:37:1343:11:380:-20.0749,0,-106.703 0/1:92:63,29:63:2280:29:999:-62.5092,0,-177.741 0/0:65:65,0:65:2328:0:0:0,-19.5669,-209.742 0/0:59:58,1:58:2053:1:31:0,-14.6613,-181.919 dDocent_Contig_907 16 . C T 74676.8 . AB=0.508969;ABP=6.43792;AC=6;AF=0.5;AN=12;AO=2497;CIGAR=1X;DP=4906;DPB=4906;DPRA=0;EPP=5425.18;EPPR=5234.09;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.9996;PAIREDR=0.99834;PAO=0;PQA=0;PQR=0;PRO=0;QA=99517;QR=96130;RO=2409;RPL=0;RPP=5425.18;RPPR=5234.09;RPR=2497;RUN=1;SAF=2497;SAP=5425.18;SAR=0;SRF=2409;SRP=5234.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:726:288,438:288:11550:438:17389:-1345.06,0,-820.113 0/1:988:468,520:468:18745:520:20742:-1567.58,0,-1388.06 0/1:717:342,375:342:13651:375:14967:-1130.03,0,-1011.71 0/1:944:439,505:439:17434:505:20204:-1532.46,0,-1283.49 0/1:742:430,312:430:17145:312:12459:-897.04,0,-1318.29 0/1:789:442,347:442:17605:347:13756:-999.509,0,-1345.5 dDocent_Contig_908 98 . N A 1833.25 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=66;CIGAR=1X;DP=66;DPB=66;DPRA=0;EPP=146.327;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2024;QR=0;RO=0;RPL=66;RPP=146.327;RPPR=0;RPR=0;RUN=1;SAF=66;SAP=146.327;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:21:-1.99499,-0.60206,0 1/1:41:0,41:0:0:41:1289:-116.294,-12.3422,0 1/1:23:0,23:0:0:23:714:-64.5518,-6.92369,0 dDocent_Contig_909 27 . G A 198.032 . AB=0.141414;ABP=113.58;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=234;DPB=234;DPRA=0.926829;EPP=39.9253;EPPR=474.22;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=660;QR=8366;RO=217;RPL=0;RPP=39.9253;RPPR=474.22;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=217;SRP=474.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:28,1:28:1074:1:34:0,-5.33096,-93.5469 0/0:24:22,2:22:867:2:74:0,-0.199859,-71.3177 0/0:58:58,0:58:2252:0:0:0,-17.4597,-202.873 0/0:24:24,0:24:919:0:0:0,-7.22472,-83.009 0/1:48:40,8:40:1526:8:322:-14.8978,0,-123.134 0/1:51:45,6:45:1728:6:230:-5.7118,0,-140.405 dDocent_Contig_910 18 . T C 47135.4 . AB=0.69967;ABP=737.491;AC=6;AF=0.5;AN=12;AO=1484;CIGAR=1X;DP=2121;DPB=2121;DPRA=0;EPP=3225.48;EPPR=1377.55;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.996631;PAIREDR=0.993681;PAO=0;PQA=0;PQR=0;PRO=0;QA=59551;QR=25090;RO=633;RPL=0;RPP=3225.48;RPPR=1377.55;RPR=1484;RUN=1;SAF=1484;SAP=3225.48;SAR=0;SRF=633;SRP=1377.55;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:259:63,196:63:2482:196:7880:-630.789,0,-145.558 0/1:423:108,313:108:4261:313:12518:-998.698,0,-256.466 0/1:248:70,177:70:2786:177:7170:-570.157,0,-176.099 0/1:321:93,228:93:3682:228:9148:-726.102,0,-234.772 0/1:411:129,281:129:5122:281:11328:-895.152,0,-337.315 0/1:459:170,289:170:6757:289:11507:-896.641,0,-469.656 dDocent_Contig_911 35 . T G 2626.83 . AB=0.0803571;ABP=1030.89;AC=0;AF=0;AN=12;AO=101;CIGAR=1X2M1X;DP=3261;DPB=3261;DPRA=1.12443;EPP=222.329;EPPR=6319.82;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.996219;PAO=0;PQA=0;PQR=0;PRO=0;QA=3949;QR=115331;RO=2909;RPL=0;RPP=222.329;RPPR=6319.82;RPR=101;RUN=1;SAF=101;SAP=222.329;SAR=0;SRF=2909;SRP=6319.82;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:421:412,7,0,0:412:16243:7,0,0:279,0,0:0,-101.042,-1435.24,-124.024,-1437.35,-1460.33,-124.024,-1437.35,-1460.33,-1460.33 0|0:481:448,0,32,0:448:17682:0,32,0:0,1258,0:0,-134.861,-1589.65,-31.4093,-1486.19,-1476.55,-134.861,-1589.65,-1486.19,-1589.65 0|0:582:535,0,45,0:535:21318:0,45,0:0,1793,0:0,-161.051,-1916.48,-13.2741,-1768.84,-1755.3,-161.051,-1916.48,-1768.84,-1916.48 0|0:472:468,0,4,0:468:18578:0,4,0:0,163,0:0,-140.882,-1670.17,-127.028,-1656.73,-1655.52,-140.882,-1670.17,-1656.73,-1670.17 0|0:672:493,54,0,125:493:19610:54,0,125:2080,0,4995:-263.001,-240.655,-1838.94,-411.409,-1855.2,-2025.96,0,-1443.8,-1614.56,-1576.93 0|0:633:553,40,0,39:553:21900:40,0,39:1590,0,1551:0,-35.5627,-1825.89,-166.47,-1837.94,-1968.84,-38.7767,-1710.24,-1841.15,-1829.41 dDocent_Contig_912 9 . T C 103.026 . AB=0.101449;ABP=288.606;AC=2;AF=0.166667;AN=12;AO=43;CIGAR=1X;DP=682;DPB=682;DPRA=0;EPP=96.3836;EPPR=1390.58;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9828;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.837209;PAIREDR=0.932707;PAO=0;PQA=0;PQR=0;PRO=0;QA=1653;QR=23750;RO=639;RPL=0;RPP=96.3836;RPPR=1390.58;RPR=43;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=639;SRP=1390.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:119:115,4:115:4237:4:156:0,-21.4053,-367.02 0/1:105:95,10:95:3541:10:383:-3.21657,0,-287.231 0/0:96:93,3:93:3494:3:117:0,-17.9885,-303.699 0/1:102:91,11:91:3382:11:425:-7.89938,0,-273.831 0/0:128:119,9:119:4433:9:340:0,-7.57785,-368.084 0/0:132:126,6:126:4663:6:232:0,-18.487,-398.502 dDocent_Contig_913 7 . T C 390.969 . AB=0.14359;ABP=218.164;AC=2;AF=0.166667;AN=12;AO=33;CIGAR=1X;DP=497;DPB=497;DPRA=1.25;EPP=74.6689;EPPR=1008.4;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.969697;PAIREDR=0.87041;PAO=0;PQA=0;PQR=0;PRO=0;QA=1282;QR=17677;RO=463;RPL=0;RPP=74.6689;RPPR=1008.4;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=463;SRP=1008.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:75:75,0:75:2873:0:0:0,-22.5772,-258.746 0/1:116:97,19:97:3709:19:740:-32.0115,0,-299.007 0/0:63:62,1:62:2379:1:39:0,-15.0683,-210.423 0/1:79:70,9:70:2695:9:348:-7.89892,0,-218.954 0/0:67:66,0:66:2482:0:0:0,-19.868,-223.283 0/0:97:93,4:93:3539:4:155:0,-14.8745,-304.314 dDocent_Contig_914 15 . G T 167.671 . AB=0.136842;ABP=111.835;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=458;DPB=458;DPRA=0.440252;EPP=37.7539;EPPR=962.801;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.902715;PAO=0;PQA=0;PQR=0;PRO=0;QA=616;QR=17682;RO=442;RPL=0;RPP=37.7539;RPPR=962.801;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=442;SRP=962.801;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:45:42,3:42:1695:3:111:0,-3.19586,-142.421 0/1:51:43,8:43:1726:8:303:-12.264,0,-140.205 0/0:66:66,0:66:2655:0:0:0,-19.868,-239.071 0/1:44:39,5:39:1547:5:202:-5.31676,0,-126.224 0/0:129:129,0:129:5139:0:0:0,-38.8329,-462.383 0/0:123:123,0:123:4920:0:0:0,-37.0267,-442.686 dDocent_Contig_915 67 . C T 116.282 . AB=0.126984;ABP=155.289;AC=1;AF=0.0833333;AN=12;AO=24;CIGAR=1X;DP=777;DPB=777;DPRA=1.10569;EPP=55.1256;EPPR=1635.96;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=59.0213;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.972074;PAO=0;PQA=0;PQR=0;PRO=0;QA=868;QR=29727;RO=752;RPL=24;RPP=55.1256;RPPR=1635.96;RPR=0;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=752;SRP=1635.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:144:144,0:144:5693:0:0:0,-43.3483,-512.205 0/0:142:142,0:142:5574:0:0:0,-42.7463,-488.076 0/0:230:226,4:226:8985:4:156:0,-54.8228,-793.7 0/1:126:109,16:109:4318:16:552:-11.9454,0,-348.106 0/0:52:48,4:48:1893:4:160:0,-0.870133,-150.346 0/0:83:83,0:83:3264:0:0:0,-24.9855,-287.125 dDocent_Contig_917 57 . A T 13420.9 . AB=0.865471;ABP=520.444;AC=7;AF=0.583333;AN=12;AO=416;CIGAR=1X;DP=476;DPB=476;DPRA=0;EPP=906.343;EPPR=133.299;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=16431;QR=2314;RO=60;RPL=416;RPP=906.343;RPPR=133.299;RPR=0;RUN=1;SAF=416;SAP=906.343;SAR=0;SRF=60;SRP=133.299;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:58:11,47:11:427:47:1806:-145.299,0,-21.3182 0/1:104:19,85:19:754:85:3334:-268.813,0,-36.8774 0/1:91:10,81:10:371:81:3192:-259.971,0,-6.32682 0/1:87:10,77:10:397:77:3087:-251.717,0,-9.89887 1/1:30:0,30:0:0:30:1196:-107.916,-9.0309,0 0/1:106:10,96:10:365:96:3816:-311.551,0,-1.27045 dDocent_Contig_918 97 . G T 85.5364 . AB=0.159091;ABP=47.4268;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=313;DPB=313;DPRA=0.819767;EPP=22.5536;EPPR=660.966;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.777778;PAIREDR=0.656766;PAO=0;PQA=0;PQR=0;PRO=0;QA=311;QR=10252;RO=303;RPL=9;RPP=22.5536;RPPR=660.966;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=303;SRP=660.966;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:63:63,0:63:2097:0:0:0,-18.9649,-189 0/0:63:63,0:63:2129:0:0:0,-18.9649,-191.883 0/0:49:47,1:47:1615:1:35:0,-11.3007,-142.144 0/0:46:46,0:46:1559:0:0:0,-13.8474,-140.602 0/1:44:37,7:37:1254:7:242:-8.87239,0,-99.9145 0/0:48:47,1:47:1598:1:34:0,-11.0505,-140.711 dDocent_Contig_919 124 . C T 817.576 . AB=0.380435;ABP=14.4341;AC=2;AF=0.166667;AN=12;AO=35;CIGAR=1X;DP=368;DPB=368;DPRA=0.666667;EPP=79.0118;EPPR=708.843;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993994;PAO=0;PQA=0;PQR=0;PRO=0;QA=1218;QR=11454;RO=333;RPL=0;RPP=79.0118;RPPR=726.111;RPR=35;RUN=1;SAF=0;SAP=79.0118;SAR=35;SRF=2;SRP=708.843;SRR=331;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:18,16:18:638:16:543:-38.9529,0,-47.514 0/0:46:46,0:46:1609:0:0:0,-13.8474,-145.094 0/0:31:31,0:31:1032:0:0:0,-9.33193,-93.1734 0/1:58:39,19:39:1373:19:675:-43.6183,0,-106.407 0/0:84:84,0:84:2862:0:0:0,-25.2865,-257.816 0/0:115:115,0:115:3940:0:0:0,-34.6184,-354.793 dDocent_Contig_920 70 . G A 226.127 . AB=0.129252;ABP=178.515;AC=2;AF=0.166667;AN=12;AO=19;CIGAR=2X;DP=388;DPB=388;DPRA=1.21992;EPP=44.2683;EPPR=804.284;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.842105;PAIREDR=0.560976;PAO=0;PQA=0;PQR=0;PRO=0;QA=744;QR=14606;RO=369;RPL=8;RPP=4.03889;RPPR=13.8912;RPR=11;RUN=1;SAF=8;SAP=4.03889;SAR=11;SRF=206;SRP=13.8912;SRR=163;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:37:37,0:37:1455:0:0:0,-11.1381,-131.208 0|0:95:95,0:95:3717:0:0:0,-28.5978,-334.568 0|0:39:39,0:39:1541:0:0:0,-11.7402,-138.934 0|0:70:70,0:70:2798:0:0:0,-21.0721,-251.93 0|1:62:56,6:56:2231:6:235:-2.85496,0,-182.303 0|1:85:72,13:72:2864:13:509:-20.5707,0,-232.278 dDocent_Contig_921 1 . N G 117.206 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=118;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:79:-7.49763,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:39:-3.89656,-0.30103,0 dDocent_Contig_922 109 . G T 130.05 . AB=0.140625;ABP=74.8046;AC=3;AF=0.25;AN=12;AO=11;CIGAR=1X;DP=144;DPB=144;DPRA=0.884615;EPP=26.8965;EPPR=291.816;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.454545;PAIREDR=0.458647;PAO=0;PQA=0;PQR=0;PRO=0;QA=443;QR=5320;RO=133;RPL=11;RPP=26.8965;RPPR=291.816;RPR=0;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=291.816;SRR=133;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:924:0:0:0,-6.92369,-83.4585 0/1:23:20,3:20:765:3:121:-4.35651,0,-62.2354 0/1:19:15,4:15:604:4:161:-9.15591,0,-48.9793 0/1:22:20,2:20:817:2:81:-1.06307,0,-67.2203 0/0:28:26,2:26:1052:2:80:0,-0.837265,-87.3783 0/0:29:29,0:29:1158:0:0:0,-8.72987,-104.497 dDocent_Contig_923 43 . G C 55421.5 . AB=0.779973;ABP=1519.25;AC=6;AF=0.5;AN=12;AO=1737;CIGAR=1X;DP=2227;DPB=2227;DPRA=0;EPP=3774.86;EPPR=1058.36;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998273;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=69126;QR=19258;RO=490;RPL=0;RPP=3774.86;RPPR=1058.36;RPR=1737;RUN=1;SAF=1737;SAP=3774.86;SAR=0;SRF=490;SRP=1067.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:261:67,194:67:2658:194:7717:-615.561,0,-160.786 0/1:391:61,330:61:2376:330:13113:-1061.51,0,-96.3049 0/1:442:117,325:117:4593:325:12967:-1033,0,-280.253 0/1:374:77,297:77:2980:297:11769:-945.828,0,-155.734 0/1:403:132,271:132:5231:271:10808:-850.664,0,-349.35 0/1:356:36,320:36:1420:320:12752:-1039.58,0,-20.893 dDocent_Contig_924 81 . A T 195.184 . AB=0.162162;ABP=76.3709;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=441;DPB=441;DPRA=1.00817;EPP=29.068;EPPR=930.229;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.866511;PAO=0;PQA=0;PQR=0;PRO=0;QA=465;QR=16288;RO=427;RPL=12;RPP=29.068;RPPR=930.229;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=427;SRP=930.229;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:68:67,0:67:2568:0:0:0,-20.169,-230.927 0/0:90:90,0:90:3422:0:0:0,-27.0927,-308.117 0/0:70:70,0:70:2649:0:0:0,-21.0721,-238.6 0/0:71:71,0:71:2723:0:0:0,-21.3731,-245.256 0/0:68:68,0:68:2590:0:0:0,-20.47,-233.293 0/1:74:61,12:61:2336:12:465:-19.8372,0,-188.09 dDocent_Contig_925 7 . A T 2408.78 . AB=0.299094;ABP=119.056;AC=6;AF=0.5;AN=12;AO=99;CIGAR=1X;DP=331;DPB=331;DPRA=0;EPP=217.986;EPPR=506.792;GTI=0;LEN=1;MEANALT=1;MQM=57.0303;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.30303;PAIREDR=0.793103;PAO=0;PQA=0;PQR=0;PRO=0;QA=3811;QR=8811;RO=232;RPL=0;RPP=217.986;RPPR=506.792;RPR=99;RUN=1;SAF=99;SAP=217.986;SAR=0;SRF=232;SRP=506.792;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:38,16:38:1420:16:621:-39.9248,0,-111.823 0/1:39:25,14:25:960:14:536:-36.7575,0,-74.9736 0/1:68:41,27:41:1550:27:1039:-73.2261,0,-119.298 0/1:67:52,15:52:2004:15:574:-31.8334,0,-160.429 0/1:47:34,13:34:1280:13:496:-30.69,0,-101.343 0/1:56:42,14:42:1597:14:545:-32.443,0,-127.143 dDocent_Contig_926 97 . T G 597.066 . AB=0.727273;ABP=17.8158;AC=1;AF=0.0833333;AN=12;AO=24;CIGAR=1X;DP=200;DPB=200;DPRA=0.988024;EPP=55.1256;EPPR=385.189;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=774;QR=5822;RO=176;RPL=24;RPP=55.1256;RPPR=385.189;RPR=0;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=176;SRP=385.189;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:951:0:0:0,-8.72987,-85.8904 0/0:56:56,0:56:1865:0:0:0,-16.8577,-168.129 0/0:45:45,0:45:1494:0:0:0,-13.5463,-134.746 0/0:19:19,0:19:627:0:0:0,-5.71957,-56.7434 0/1:33:9,24:9:289:24:774:-60.0253,0,-16.3901 0/0:18:18,0:18:596:0:0:0,-5.41854,-53.9521 dDocent_Contig_927 11 . T A 67.5322 . AB=0.0958084;ABP=239.987;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1M2I2M1X;DP=774;DPB=782.75;DPRA=1.37562;EPP=37.7539;EPPR=1612.07;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.997301;PAO=0;PQA=0;PQR=0;PRO=0;QA=621;QR=27732;RO=741;RPL=0;RPP=37.7539;RPPR=1612.07;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=741;SRP=1612.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:131:131,0,0:131:4893:0,0:0,0:0,-39.4349,-440.433,-39.4349,-440.433,-440.433 0|0:76:76,0,0:76:2853:0,0:0,0:0,-22.8783,-256.962,-22.8783,-256.962,-256.962 0|0:112:109,0,0:109:4073:0,0:0,0:0,-32.8123,-366.504,-32.8123,-366.504,-366.504 0|0:116:116,0,0:116:4335:0,0:0,0:0,-34.9195,-390.257,-34.9195,-390.257,-390.257 0|0:172:163,0,9:163:6078:0,9:0,347:0,-49.0679,-546.632,-20.1873,-518.136,-515.426 0|1:167:146,16,5:146:5500:16,5:621,195:-7.07198,0,-445.87,-34.9925,-434.656,-484.176 dDocent_Contig_928 128 . A T 89.1575 . AB=0.120482;ABP=106.849;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=573;DPB=573;DPRA=1.865;EPP=42.0968;EPPR=1208.18;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=675;QR=20459;RO=555;RPL=0;RPP=42.0968;RPPR=1208.18;RPR=18;RUN=1;SAF=0;SAP=42.0968;SAR=18;SRF=0;SRP=1208.18;SRR=555;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:83:73,10:73:2670:10:373:-8.93348,0,-215.511 0/0:103:103,0:103:3831:0:0:0,-31.0061,-344.908 0/0:188:181,7:181:6644:7:264:0,-32.4741,-573.792 0/0:102:101,1:101:3758:1:38:0,-26.9078,-334.549 0/0:34:34,0:34:1246:0:0:0,-10.235,-112.432 0/0:63:63,0:63:2310:0:0:0,-18.9649,-208.116 dDocent_Contig_929 9 . T G 2843.42 . AB=0.291262;ABP=158.935;AC=6;AF=0.5;AN=12;AO=120;CIGAR=1X;DP=412;DPB=412;DPRA=0;EPP=263.587;EPPR=637.08;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9692;NS=6;NUMALT=1;ODDS=0;PAIRED=0.95;PAIREDR=0.893836;PAO=0;PQA=0;PQR=0;PRO=0;QA=4560;QR=10720;RO=292;RPL=0;RPP=263.587;RPPR=637.08;RPR=120;RUN=1;SAF=120;SAP=263.587;SAR=0;SRF=292;SRP=637.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:64:37,27:37:1342:27:1002:-71.2233,0,-101.794 0/1:96:66,30:66:2396:30:1154:-75.2614,0,-186.964 0/1:52:44,8:44:1627:8:301:-11.792,0,-131.05 0/1:91:66,25:66:2485:25:946:-58.0587,0,-196.451 0/1:43:35,8:35:1257:8:311:-15.41,0,-100.474 0/1:66:44,22:44:1613:22:846:-56.5941,0,-125.576 dDocent_Contig_930 98 . N A 224.098 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=5.42101e-20;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=223;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:30:-2.84996,-0.60206,0 1/1:1:0,1:0:0:1:20:-1.99996,-0.30103,0 1/1:2:0,2:0:0:2:47:-4.46369,-0.60206,0 1/1:2:0,2:0:0:2:61:-5.79353,-0.60206,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 dDocent_Contig_931 107 . N A 5343.11 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=173;CIGAR=1X;DP=173;DPB=173;DPRA=0;EPP=378.675;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5912;QR=0;RO=0;RPL=0;RPP=378.675;RPPR=0;RPR=173;RUN=1;SAF=0;SAP=378.675;SAR=173;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:26:0,26:0:0:26:878:-79.3283,-7.82678,0 1/1:80:0,80:0:0:80:2735:-246.403,-24.0824,0 1/1:17:0,17:0:0:17:591:-53.5176,-5.11751,0 1/1:49:0,49:0:0:49:1673:-150.857,-14.7505,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_933 13 . T C 100067 . AB=0.867965;ABP=546.348;AC=11;AF=0.916667;AN=12;AO=2949;CIGAR=1X;DP=3125;DPB=3125;DPRA=0;EPP=6406.68;EPPR=383.018;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.9976;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.974907;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=117425;QR=6959;RO=175;RPL=0;RPP=6406.68;RPPR=383.018;RPR=2949;RUN=1;SAF=2949;SAP=6406.68;SAR=0;SRF=175;SRP=383.018;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:574:20,554:20:799:554:22008:-1906.66,-100.564,0 1/1:735:38,697:38:1521:697:27718:-2355.06,-84.1286,0 1/1:502:33,469:33:1300:469:18686:-1562.97,-33.8542,0 0/1:462:60,401:60:2385:401:15971:-1297,0,-75.6399 1/1:407:24,383:24:954:383:15224:-1282.84,-36.3572,0 1/1:445:0,445:0:0:445:17818:-1602.17,-133.958,0 dDocent_Contig_934 26 . T G 2186.97 . AB=0.150743;ABP=1001.07;AC=6;AF=0.5;AN=12;AO=142;CIGAR=1X;DP=942;DPB=942;DPRA=0;EPP=311.359;EPPR=1738.02;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.8592;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5606;QR=32036;RO=799;RPL=0;RPP=311.359;RPPR=1738.02;RPR=142;RUN=1;SAF=142;SAP=311.359;SAR=0;SRF=799;SRP=1738.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:103:76,27:76:3063:27:1060:-64.682,0,-244.737 0/1:185:150,35:150:6028:35:1384:-69.1243,0,-486.591 0/1:181:162,19:162:6496:19:731:-11.625,0,-529.856 0/1:263:228,34:228:9136:34:1369:-44.2279,0,-742.442 0/1:162:148,14:148:5909:14:565:-2.42491,0,-482.823 0/1:48:35,13:35:1404:13:497:-30.6084,0,-112.165 dDocent_Contig_935 22 . T G 2978.67 . AB=0.177106;ABP=841.593;AC=6;AF=0.5;AN=12;AO=164;CIGAR=1X;DP=926;DPB=926;DPRA=0;EPP=359.132;EPPR=1657.67;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.993902;PAIREDR=0.997375;PAO=0;PQA=0;PQR=0;PRO=0;QA=6432;QR=28685;RO=762;RPL=0;RPP=359.132;RPPR=1657.67;RPR=164;RUN=1;SAF=164;SAP=359.132;SAR=0;SRF=762;SRP=1657.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:127:76,51:76:2869:51:1998:-141.793,0,-220.153 0/1:173:154,19:154:5809:19:740:-14.8423,0,-470.683 0/1:134:102,32:102:3888:32:1260:-73.3303,0,-309.679 0/1:237:214,23:214:8028:23:919:-11.6729,0,-650.981 0/1:112:89,23:89:3300:23:896:-47.2302,0,-263.414 0/1:143:127,16:127:4791:16:619:-12.9947,0,-388.149 dDocent_Contig_936 98 . N T 480.443 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=16;CIGAR=1X;DP=16;DPB=16;DPRA=0;EPP=37.7539;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=5.42101e-20;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=504;QR=0;RO=0;RPL=16;RPP=37.7539;RPPR=0;RPR=0;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:106:-9.88916,-0.90309,0 1/1:5:0,5:0:0:5:167:-15.3589,-1.50515,0 1/1:2:0,2:0:0:2:54:-5.12892,-0.60206,0 1/1:3:0,3:0:0:3:105:-9.79609,-0.90309,0 1/1:2:0,2:0:0:2:37:-3.51483,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_937 99 . N T 184.549 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=6;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=187;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:93:-8.67779,-0.90309,0 1/1:2:0,1:0:0:1:35:-3.2487,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:24:-2.39989,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_938 5 . A G 220.114 . AB=0.202899;ABP=55.9124;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=217;DPB=217;DPRA=2.19118;EPP=37.7539;EPPR=439.476;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9502;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=547;QR=6887;RO=201;RPL=0;RPP=37.7539;RPPR=439.476;RPR=16;RUN=1;SAF=0;SAP=37.7539;SAR=16;SRF=0;SRP=439.476;SRR=201;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:25,8:25:859:8:272:-14.8771,0,-67.6918 0/0:22:22,0:22:762:0:0:0,-6.62266,-68.9007 0/0:80:78,2:78:2702:2:70:0,-17.435,-236.788 0/1:36:30,6:30:1008:6:205:-7.94791,0,-80.1862 0/0:24:24,0:24:814:0:0:0,-7.22472,-73.5725 0/0:22:22,0:22:742:0:0:0,-6.62266,-67.0939 dDocent_Contig_939 31 . C T 200.003 . AB=0.121795;ABP=196.828;AC=1;AF=0.0833333;AN=12;AO=33;CIGAR=1X;DP=921;DPB=921;DPRA=1.67959;EPP=74.6689;EPPR=1913.95;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995495;PAO=0;PQA=0;PQR=0;PRO=0;QA=1297;QR=34974;RO=888;RPL=0;RPP=74.6689;RPPR=1931.28;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=886;SRP=1913.95;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:121:116,5:116:4558:5:205:0,-17.5896,-391.323 0/0:227:220,7:220:8693:7:281:0,-42.6727,-756.219 0/1:156:137,19:137:5332:19:744:-20.3191,0,-432.852 0/0:175:174,1:174:6865:1:26:0,-50.0804,-614.969 0/0:98:98,0:98:3899:0:0:0,-29.5009,-350.906 0/0:144:143,1:143:5627:1:41:0,-39.2538,-502.159 dDocent_Contig_940 50 . A G 40.6744 . AB=0.0909091;ABP=194.889;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=1109;DPB=1109;DPRA=0.675537;EPP=29.068;EPPR=2378.6;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996344;PAO=0;PQA=0;PQR=0;PRO=0;QA=483;QR=43152;RO=1094;RPL=12;RPP=29.068;RPPR=2378.6;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=1094;SRP=2378.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:132:120,12:120:4762:12:483:-4.08513,0,-388.766 0/0:223:222,0:222:8730:0:0:0,-66.8287,-785.159 0/0:106:106,0:106:4182:0:0:0,-31.9092,-376.367 0/0:197:196,0:196:7708:0:0:0,-59.0019,-693.296 0/0:228:228,0:228:9018:0:0:0,-68.6348,-811.109 0/0:223:222,0:222:8752:0:0:0,-66.8287,-787.126 dDocent_Contig_941 32 . G A 21840.7 . AB=0.308682;ABP=892.888;AC=3;AF=0.25;AN=12;AO=945;CIGAR=1X;DP=5121;DPB=5121;DPRA=0;EPP=2055.05;EPPR=9066.74;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=36846;QR=165273;RO=4174;RPL=0;RPP=2055.05;RPPR=9066.74;RPR=945;RUN=1;SAF=945;SAP=2055.05;SAR=0;SRF=4174;SRP=9066.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:606:594,12:594:23454:12:458:0,-140.864,-2067.38 0/0:838:791,47:791:31314:47:1845:0,-85.9952,-2649.29 0/1:579:518,61:518:20610:61:2346:-37.0194,0,-1678.9 0/0:878:856,22:856:33808:22:879:0,-184.887,-2960.33 0/1:1144:811,332:811:32122:332:12982:-823.422,0,-2543.99 0/1:1076:604,471:604:23965:471:18336:-1325.24,0,-1831.13 dDocent_Contig_942 8 . G C 14879.9 . AB=0.0849421;ABP=390.564;AC=0;AF=0;AN=12;AO=22;CIGAR=1X1M1X;DP=811;DPB=811;DPRA=0;EPP=50.7827;EPPR=628.394;GTI=0;LEN=1;MEANALT=2;MQM=51;MQMR=60;NS=6;NUMALT=2;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.90625;PAO=0;PQA=0;PQR=0;PRO=0;QA=841;QR=10653;RO=288;RPL=0;RPP=50.7827;RPPR=628.394;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=288;SRP=628.394;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:66:23,0,43:23:839:0,43:0,1653:-129.018,-135.941,-204.476,0,-68.9059,-55.9616 0|0:194:54,0,140:54:2030:0,140:0,5434:-430.088,-446.344,-612.653,0,-166.688,-124.543 0|0:92:29,0,62:29:1066:0,62:0,2355:-184.283,-193.013,-280.153,0,-87.266,-68.6021 0|0:200:53,0,146:53:1941:0,146:0,5657:-448.398,-464.352,-622.973,0,-158.877,-114.926 0|0:96:44,12,40:44:1616:12,40:461,1552:-114.137,-89.7703,-218.251,0,-94.4762,-120.051 0|0:163:85,10,68:85:3161:10,68:380,2584:-186.06,-180.657,-436.35,0,-227.71,-238.231 dDocent_Contig_943 113 . T G 8503.68 . AB=0.70073;ABP=146.851;AC=7;AF=0.583333;AN=12;AO=316;CIGAR=2X3M;DP=441;DPB=441;DPRA=0;EPP=689.196;EPPR=267.93;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10843;QR=4189;RO=122;RPL=0;RPP=689.196;RPPR=267.93;RPR=316;RUN=1;SAF=0;SAP=689.196;SAR=316;SRF=0;SRP=267.93;SRR=122;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:103:31,1,71:31:1059:1,71:35,2434:-188.268,-194.752,-280.394,0,-83.0874,-64.5623 0|1:81:39,0,42:39:1343:0,42:0,1436:-105.153,-116.893,-225.98,0,-109.43,-96.7866 0|1:64:23,0,41:23:803:0,41:0,1419:-108.743,-115.667,-180.986,0,-65.6674,-53.3252 0|1:118:13,0,105:13:429:0,105:0,3589:-287.714,-291.627,-326.309,0,-35.0126,-3.40444 1|1:30:0,2,28:0:0:2,28:46,969:-87.286,-83.7566,-83.1545,-8.42884,-4.66173,0 0|1:45:16,0,29:16:555:0,29:0,996:-76.405,-81.2215,-126.338,0,-45.4618,-36.7319 dDocent_Contig_944 15 . T C 64.114 . AB=0.125;ABP=61.6401;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=361;DPB=361;DPRA=1.00556;EPP=29.068;EPPR=760.854;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.87106;PAO=0;PQA=0;PQR=0;PRO=0;QA=471;QR=14099;RO=349;RPL=0;RPP=29.068;RPPR=760.854;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=349;SRP=760.854;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:48:42,6:42:1699:6:228:-6.42912,0,-138.676 0/0:89:89,0:89:3604:0:0:0,-26.7917,-324.366 0/0:54:54,0:54:2187:0:0:0,-16.2556,-196.993 0/0:60:59,1:59:2391:1:41:0,-13.9672,-211.237 0/0:73:68,5:68:2742:5:202:0,-3.41369,-228.328 0/0:37:37,0:37:1476:0:0:0,-11.1381,-133.084 dDocent_Contig_945 52 . T A 393.199 . AB=0.125899;ABP=340.948;AC=3;AF=0.25;AN=12;AO=36;CIGAR=1X;DP=491;DPB=491;DPRA=1.12583;EPP=81.1833;EPPR=991.03;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.861111;PAIREDR=0.947253;PAO=0;PQA=0;PQR=0;PRO=0;QA=1414;QR=18205;RO=455;RPL=36;RPP=81.1833;RPPR=991.03;RPR=0;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=455;SRP=991.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:75:62,13:62:2481:13:500:-22.765,0,-200.852 0/1:110:97,13:97:3850:13:521:-14.1225,0,-313.39 0/0:62:61,1:61:2457:1:41:0,-14.5693,-217.172 0/1:93:84,9:84:3395:9:352:-4.04179,0,-277.585 0/0:78:78,0:78:3101:0:0:0,-23.4803,-279.164 0/0:73:73,0:73:2921:0:0:0,-21.9752,-262.984 dDocent_Contig_946 110 . T G 145.583 . AB=0.235294;ABP=23.7032;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=208;DPB=208;DPRA=0.977011;EPP=20.3821;EPPR=435.133;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.748744;PAO=0;PQA=0;PQR=0;PRO=0;QA=272;QR=6648;RO=199;RPL=0;RPP=20.3821;RPPR=435.133;RPR=8;RUN=1;SAF=0;SAP=20.3821;SAR=8;SRF=0;SRP=435.133;SRR=199;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:26,8:26:864:8:272:-14.576,0,-67.83 0/0:32:31,0:31:1045:0:0:0,-9.33193,-94.0254 0/0:58:58,0:58:1930:0:0:0,-17.4597,-173.972 0/0:20:20,0:20:659:0:0:0,-6.0206,-59.6222 0/0:32:32,0:32:1085:0:0:0,-9.63296,-97.9545 0/0:32:32,0:32:1065:0:0:0,-9.63296,-96.1491 dDocent_Contig_947 15 . A T 407.284 . AB=0.181818;ABP=109.412;AC=4;AF=0.333333;AN=12;AO=26;CIGAR=1X;DP=177;DPB=177;DPRA=0;EPP=59.4686;EPPR=326.56;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.846154;PAIREDR=0.711409;PAO=0;PQA=0;PQR=0;PRO=0;QA=1024;QR=5862;RO=149;RPL=0;RPP=59.4686;RPPR=326.56;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=149;SRP=326.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:31,6:31:1247:6:224:-9.376,0,-101.363 0/0:39:36,3:36:1435:3:116:0,-0.924661,-118.588 0/0:17:16,1:16:625:1:41:0,-1.02294,-52.4797 0/1:32:25,6:25:960:6:240:-12.4757,0,-77.2165 0/1:21:16,4:16:629:4:161:-8.45424,0,-50.5188 0/1:31:25,6:25:966:6:242:-12.8254,0,-77.9022 dDocent_Contig_948 129 . T C 1454.05 . AB=0.208333;ABP=304.483;AC=2;AF=0.166667;AN=12;AO=85;CIGAR=1X;DP=1017;DPB=1017;DPRA=1.3399;EPP=187.585;EPPR=2026.82;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.976471;PAIREDR=0.994635;PAO=0;PQA=0;PQR=0;PRO=0;QA=2983;QR=33727;RO=932;RPL=0;RPP=187.585;RPPR=2026.82;RPR=85;RUN=1;SAF=0;SAP=187.585;SAR=85;SRF=0;SRP=2026.82;SRR=932;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:143:143,0:143:5139:0:0:0,-43.0473,-462.631 0/0:219:219,0:219:7970:0:0:0,-65.9256,-717.277 0/0:97:97,0:97:3505:0:0:0,-29.1999,-315.647 0/0:150:150,0:150:5459:0:0:0,-45.1545,-491.408 0/1:195:149,46:149:5348:46:1625:-87.8298,0,-422.724 0/1:213:174,39:174:6306:39:1358:-58.3893,0,-503.479 dDocent_Contig_949 1 . N G 77.0277 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.21888;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 dDocent_Contig_950 70 . A G 165.006 . AB=0.172414;ABP=57.0725;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=2M1X;DP=452;DPB=454.333;DPRA=0.736041;EPP=24.725;EPPR=947.601;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.765517;PAO=0;PQA=0;PQR=0;PRO=0;QA=377;QR=16070;RO=435;RPL=5;RPP=3.0103;RPPR=5.21172;RPR=5;RUN=1;SAF=5;SAP=3.0103;SAR=5;SRF=228;SRP=5.21172;SRR=207;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:66:64,2,0:64:2379:2,0:69,0:0,-13.3153,-207.766,-19.2659,-208.368,-213.973 0|0:94:94,0,0:94:3469:0,0:0,0:0,-28.2968,-312.344,-28.2968,-312.344,-312.344 0|0:69:65,4,0:65:2392:4,0:151,0:0,-6.81513,-201.53,-19.5669,-202.734,-215.109 0|0:75:74,1,0:74:2690:1,0:25,0:0,-20.0774,-239.791,-22.2762,-240.092,-242.039 0|1:58:48,0,10:48:1771:0,10:0,377:-16.8193,-31.2688,-176.088,0,-145.195,-142.184 0|0:90:90,0,0:90:3369:0,0:0,0:0,-27.0927,-303.343,-27.0927,-303.343,-303.343 dDocent_Contig_951 25 . G A 4452.85 . AB=0.119291;ABP=4688.74;AC=5;AF=0.416667;AN=12;AO=474;CIGAR=1X;DP=4182;DPB=4182;DPRA=0;EPP=1032.29;EPPR=8048.32;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=1;PAIREDR=0.99919;PAO=0;PQA=0;PQR=0;PRO=0;QA=18599;QR=147665;RO=3705;RPL=0;RPP=1032.29;RPPR=8048.32;RPR=474;RUN=1;SAF=474;SAP=1032.29;SAR=0;SRF=3705;SRP=8048.32;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:493:439,53:439:17566:53:2057:-37.0595,0,-1431.19 0/1:785:667,117:667:26439:117:4611:-178.525,0,-2140.75 0/0:460:430,30:430:17214:30:1172:0,-32.7124,-1442.06 0/1:717:611,106:611:24281:106:4183:-160.61,0,-1967.32 0/1:896:803,92:803:32026:92:3642:-58.2777,0,-2609.87 0/1:831:755,76:755:30139:76:2934:-14.0132,0,-2459.57 dDocent_Contig_952 17 . C T 59181.1 . AB=0.770769;ABP=830.869;AC=9;AF=0.75;AN=12;AO=1765;CIGAR=1X2M;DP=2075;DPB=2103;DPRA=0;EPP=3835.66;EPPR=489.42;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=70302;QR=8786;RO=224;RPL=0;RPP=3835.66;RPPR=489.42;RPR=1765;RUN=1;SAF=1765;SAP=3835.66;SAR=0;SRF=224;SRP=489.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:207:35,7,165:35:1379:7,165:278,6541:-527.819,-515.469,-626.809,0,-90.5581,-63.775 0|1:306:60,18,227:60:2333:18,227:727,9023:-724.777,-682.904,-869.177,0,-131.748,-123.351 0|1:421:82,22,316:82:3232:22,316:883,12559:-1009.2,-961.124,-1220.38,0,-193.115,-170.749 1|1:366:35,37,294:35:1376:37,294:1466,11709:-961.08,-850.953,-952.977,-7.50312,0,-32.1617 1|1:342:12,0,330:12:466:0,330:0,13210:-1145.63,-1149.24,-1187.53,-60.6676,-99.3399,0 1|1:433:0,0,433:0:0:0,433:0,17260:-1552.01,-1552.01,-1552.01,-130.346,-130.346,0 dDocent_Contig_953 15 . A G 309.162 . AB=0.140741;ABP=154.354;AC=2;AF=0.166667;AN=12;AO=19;CIGAR=3M1X3M;DP=397;DPB=404.143;DPRA=0.89207;EPP=44.2683;EPPR=789.083;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.875691;PAO=0;PQA=0;PQR=0;PRO=0;QA=773;QR=14315;RO=362;RPL=0;RPP=44.2683;RPPR=789.083;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=362;SRP=789.083;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:35:31,4,0,0:31:1205:4,0,0:145,0,0:-2.86823,0,-98.1974,-12.2002,-99.4016,-111.236,-12.2002,-99.4016,-111.236,-111.236 0|0:76:72,0,0,4:72:2828:0,0,4:0,0,159:0,-21.6742,-254.258,-21.6742,-254.258,-254.258,-8.18745,-241.168,-241.168,-239.964 0|0:60:57,3,0,0:57:2265:3,0,0:114,0,0:0,-7.43088,-193.395,-17.1587,-194.299,-203.646,-17.1587,-194.299,-203.646,-203.646 0|0:91:86,3,0,0:86:3400:3,0,0:117,0,0:0,-16.2595,-295.177,-25.8886,-296.081,-305.697,-25.8886,-296.081,-305.697,-305.697 0|1:73:61,0,12,0:61:2414:0,12,0:0,487,0:-22.2059,-40.5687,-239.233,0,-199.068,-195.455,-40.5687,-239.233,-199.068,-239.233 0|1:62:55,0,7,0:55:2203:0,7,0:0,286,0:-7.45096,-24.0076,-205.495,0,-181.894,-179.787,-24.0076,-205.495,-181.894,-205.495 dDocent_Contig_954 1 . N G 70.4105 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.21888;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=74;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:74:-7.02402,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_955 50 . G T 1883.1 . AB=0.280899;ABP=114.341;AC=2;AF=0.166667;AN=12;AO=75;CIGAR=1X;DP=798;DPB=798;DPRA=1.00565;EPP=165.871;EPPR=1572.98;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.995851;PAO=0;PQA=0;PQR=0;PRO=0;QA=2989;QR=28582;RO=723;RPL=75;RPP=165.871;RPPR=1572.98;RPR=0;RUN=1;SAF=75;SAP=165.871;SAR=0;SRF=723;SRP=1572.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:88:88,0:88:3462:0:0:0,-26.4906,-311.633 0/0:99:99,0:99:3919:0:0:0,-29.802,-352.704 0/0:233:233,0:233:9178:0:0:0,-70.14,-825.499 0/0:111:111,0:111:4382:0:0:0,-33.4143,-394.332 0/1:108:72,36:72:2869:36:1428:-96.2599,0,-225.8 0/1:159:120,39:120:4772:39:1561:-92.864,0,-381.521 dDocent_Contig_956 17 . A C 11450.3 . AB=0.0820611;ABP=798.018;AC=1;AF=0.0833333;AN=12;AO=43;CIGAR=1X3M1X;DP=524;DPB=524;DPRA=0;EPP=96.3836;EPPR=276.616;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.976744;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1686;QR=4842;RO=126;RPL=0;RPP=96.3836;RPPR=276.616;RPR=43;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=126;SRP=276.616;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:70:11,3,55:11:429:3,55:120,2179:-176.031,-169.457,-203.816,0,-25.3694,-18.6996 1|0:102:6,24,72:6:231:24,72:940,2832:-289.472,-213.986,-225.728,-58.3327,0,-55.6238 0|0:71:19,2,50:19:744:2,50:79,1948:-154.358,-153.576,-214.152,0,-54.6733,-46.1231 0|0:98:31,2,63:31:1197:2,63:81,2442:-191.335,-193.987,-291.692,0,-91.7025,-79.4185 0|0:76:25,10,41:25:960:10,41:387,1578:-122.01,-97.7473,-173.541,0,-47.013,-66.4596 0|0:107:34,2,71:34:1281:2,71:79,2752:-215.816,-219.55,-323.911,0,-98.4468,-83.5756 dDocent_Contig_957 98 . N C 287.436 . AB=0;ABP=0;AC=4;AF=0.666667;AN=6;AO=9;CIGAR=1X;DP=10;DPB=10;DPRA=4.5;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=305;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 0/0:1:0,0:0:0:0:0:0,0,0 ./.:.:.:.:.:.:.:. 1/1:6:0,6:0:0:6:201:-18.419,-1.80618,0 1/1:3:0,3:0:0:3:104:-9.70309,-0.90309,0 dDocent_Contig_958 98 . N C 301.217 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=12;CIGAR=1X;DP=16;DPB=16;DPRA=0;EPP=29.068;EPPR=0;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=318;QR=0;RO=0;RPL=12;RPP=29.068;RPPR=0;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,1:0:0:1:36:-3.38336,-0.30103,0 1/1:3:0,2:0:0:2:43:-3.84506,-0.60206,0 1/1:2:0,2:0:0:2:54:-5.12834,-0.60206,0 1/1:3:0,3:0:0:3:61:-5.69202,-0.90309,0 1/1:2:0,1:0:0:1:18:-1.61498,-0.30103,0 1/1:4:0,3:0:0:3:106:-9.6583,-0.90309,0 dDocent_Contig_960 107 . N T 2934.48 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=100;CIGAR=1X;DP=102;DPB=102;DPRA=0;EPP=220.158;EPPR=0;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=4.33681e-19;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3237;QR=0;RO=0;RPL=0;RPP=220.158;RPPR=0;RPR=100;RUN=1;SAF=0;SAP=220.158;SAR=100;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:107:-9.89472,-1.20412,0 1/1:8:0,7:0:0:7:226:-20.5555,-2.10721,0 1/1:2:0,2:0:0:2:26:-2.46997,-0.60206,0 1/1:6:0,6:0:0:6:189:-17.3207,-1.80618,0 1/1:4:0,3:0:0:3:91:-8.28073,-0.90309,0 1/1:78:0,78:0:0:78:2598:-234.076,-23.4803,0 dDocent_Contig_963 27 . C G 1555.55 . AB=0.176842;ABP=433.872;AC=1;AF=0.0833333;AN=12;AO=109;CIGAR=1X;DP=2597;DPB=2597;DPRA=1.25826;EPP=239.701;EPPR=5403.46;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999196;PAO=0;PQA=0;PQR=0;PRO=0;QA=4321;QR=99546;RO=2487;RPL=0;RPP=239.701;RPPR=5403.46;RPR=109;RUN=1;SAF=109;SAP=239.701;SAR=0;SRF=2487;SRP=5403.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:477:476,1:476:19006:1:40:0,-139.596,-1704.93 0/0:437:437,0:437:17574:0:0:0,-131.55,-1580.18 0/0:382:382,0:382:15184:0:0:0,-114.993,-1365.37 0/0:331:331,0:331:13214:0:0:0,-99.6409,-1188.26 0/0:495:470,24:470:18850:24:961:0,-62.3269,-1608.09 0/1:475:391,84:391:15718:84:3320:-155.874,0,-1270.34 dDocent_Contig_964 1 . N G 295.967 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=317;QR=0;RO=0;RPL=0;RPP=20.3821;RPPR=0;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:157:-14.5079,-1.20412,0 1/1:4:0,4:0:0:4:160:-14.7834,-1.20412,0 dDocent_Contig_965 22 . G A 1272.45 . AB=0.125148;ABP=1036.77;AC=1;AF=0.0833333;AN=12;AO=201;CIGAR=1X;DP=5051;DPB=5051;DPRA=0.76023;EPP=439.476;EPPR=10532.5;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999588;PAO=0;PQA=0;PQR=0;PRO=0;QA=8065;QR=194158;RO=4849;RPL=0;RPP=439.476;RPPR=10532.5;RPR=201;RUN=1;SAF=201;SAP=439.476;SAR=0;SRF=4849;SRP=10532.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:676:662,14:662:26574:14:562:0,-152.574,-2338.3 0/0:987:931,55:931:37364:55:2208:0,-98.3371,-3160.27 0/0:537:511,26:511:20478:26:1044:0,-67.4,-1746.99 0/1:847:741,106:741:29558:106:4251:-127.564,0,-2402.55 0/0:1047:1047,0:1047:41835:0:0:0,-315.178,-3761.14 0/0:957:957,0:957:38349:0:0:0,-288.086,-3447.73 dDocent_Contig_967 74 . T A 309.369 . AB=0.227848;ABP=53.8337;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1X;DP=1150;DPB=1150;DPRA=1.0504;EPP=44.2683;EPPR=2454.6;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=644;QR=38990;RO=1129;RPL=19;RPP=44.2683;RPPR=2454.6;RPR=0;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=1129;SRP=2454.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:114:114,0:114:3914:0:0:0,-34.3174,-352.466 0/0:317:315,1:315:10721:1:36:0,-91.887,-961.258 0/0:188:188,0:188:6556:0:0:0,-56.5936,-590.114 0/0:336:335,0:335:11751:0:0:0,-100.845,-1057.07 0/0:116:116,0:116:3959:0:0:0,-34.9195,-356.513 0/1:79:61,18:61:2089:18:608:-31.2557,0,-164.496 dDocent_Contig_968 84 . A T 64159.6 . AB=0.822753;ABP=1784.57;AC=7;AF=0.583333;AN=12;AO=2278;CIGAR=1X;DP=2628;DPB=2628;DPRA=0;EPP=4949.62;EPPR=758.683;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999122;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=77942;QR=11973;RO=348;RPL=2278;RPP=4949.62;RPPR=758.683;RPR=0;RUN=1;SAF=2278;SAP=4949.62;SAR=0;SRF=348;SRP=758.683;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:314:64,250:64:2209:250:8482:-668.925,0,-104.559 0/1:280:48,232:48:1647:232:7926:-629.132,0,-64.2309 0/1:139:13,126:13:462:126:4343:-349.227,0,-0.0735397 0/1:276:50,225:50:1743:225:7732:-612.935,0,-74.1234 1/1:659:1,658:1:34:658:22584:-2028.76,-194.98,0 0/1:960:172,787:172:5878:787:26875:-2129.45,0,-240.413 dDocent_Contig_972 87 . T C 170.384 . AB=0.153061;ABP=105.468;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=1X;DP=581;DPB=581;DPRA=0.949664;EPP=57.2971;EPPR=1210.35;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.976619;PAO=0;PQA=0;PQR=0;PRO=0;QA=857;QR=18900;RO=556;RPL=25;RPP=57.2971;RPPR=1210.35;RPR=0;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=556;SRP=1210.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:69:63,6:63:2127:6:207:0,-1.80283,-172.73 0/0:116:112,4:112:3818:4:133:0,-22.6208,-331.537 0/0:72:72,0:72:2418:0:0:0,-21.6742,-217.876 0/1:98:83,15:83:2858:15:517:-17.357,0,-227.97 0/0:88:88,0:88:2954:0:0:0,-26.4906,-266.098 0/0:138:138,0:138:4725:0:0:0,-41.5421,-425.435 dDocent_Contig_973 15 . G A 90.5903 . AB=0.103448;ABP=161.453;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=1X;DP=758;DPB=758;DPRA=1.16577;EPP=57.2971;EPPR=1590.36;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.961696;PAO=0;PQA=0;PQR=0;PRO=0;QA=1010;QR=29170;RO=731;RPL=0;RPP=57.2971;RPPR=1590.36;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=731;SRP=1590.36;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:116:103,12:103:4113:12:483:-9.07676,0,-335.425 0/0:152:147,4:147:5876:4:162:0,-30.8893,-513.667 0/0:108:104,4:104:4131:4:162:0,-17.5443,-356.791 0/0:147:143,4:143:5702:4:163:0,-29.193,-497.922 0/0:111:111,0:111:4427:0:0:0,-33.4143,-398.373 0/0:124:123,1:123:4921:1:40:0,-33.332,-438.784 dDocent_Contig_974 36 . A T 208.367 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=4;CIGAR=1X2M1X2M1X;DP=257;DPB=257;DPRA=0.818182;EPP=11.6962;EPPR=519.821;GTI=0;LEN=1;MEANALT=1;MQM=6;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.756303;PAO=0;PQA=0;PQR=0;PRO=0;QA=160;QR=9390;RO=238;RPL=0;RPP=11.6962;RPPR=519.821;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=238;SRP=519.821;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:39:35,4,0:35:1381:4,0:160,0:0,-9.52065,-122.335,-10.536,-123.54,-124.461 0|0:54:54,0,0:54:2125:0,0:0,0:0,-16.2556,-191.441,-16.2556,-191.441,-191.441 0|0:39:36,0,3:36:1432:0,3:0,122:0,-10.8371,-128.734,-0.367677,-118.67,-117.767 0|0:50:50,0,0:50:1954:0,0:0,0:0,-15.0515,-176.066,-15.0515,-176.066,-176.066 0|0:41:35,0,6:35:1380:0,6:0,243:-9.90537,-20.4414,-133.964,0,-113.926,-112.12 0|0:34:28,0,6:28:1118:0,6:0,240:-11.7401,-20.1689,-112.248,0,-92.4788,-90.6727 dDocent_Contig_975 33 . C A 10105.5 . AB=0.0272851;ABP=1425.72;AC=0;AF=0;AN=12;AO=20;CIGAR=1M1I10M1X7M;DP=934;DPB=998.684;DPRA=0;EPP=46.4397;EPPR=441.648;GTI=0;LEN=1;MEANALT=15.6;MQM=60;MQMR=60;NS=6;NUMALT=6;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=576;QR=7706;RO=202;RPL=0;RPP=46.4397;RPPR=441.648;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=202;SRP=441.648;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:160:26,3,1,47,51,15,2:26:1004:3,1,47,51,15,2:80,41,1845,1988,592,70:-224.864,-226.4,-307.956,-229.306,-305.474,-311.465,-80.9461,-157.12,-160.027,-149.263,-69.2915,-145.466,-148.372,0,-136.404,-183.977,-260.146,-263.053,-114.695,-103.041,-261.922,-226.997,-303.165,-306.072,-157.717,-146.063,-260.744,-308.854 0|0:132:24,3,1,43,34,19,1:24:906:3,1,43,34,19,1:84,36,1680,1311,739,34:-164.28,-164.853,-238.203,-168.567,-236.168,-242.519,-33.3929,-101,-104.714,-94.7075,-63.8616,-131.466,-135.181,0,-127.883,-110.773,-178.376,-182.09,-46.9164,-77.3848,-179.308,-168.747,-236.348,-240.063,-104.894,-135.36,-182.27,-242.699 0|0:76:8,7,2,30,9,8,4:8:302:7,2,30,9,8,4:269,81,1200,341,286,161:-99.6707,-79.9925,-102.637,-95.3984,-98.064,-119.548,-3.20076,-5.86694,-21.277,-18.9285,-74.1273,-76.7929,-92.1989,0,-96.1702,-78.7701,-81.4357,-96.8413,-4.6455,-75.5705,-101.114,-88.8069,-91.4725,-106.878,-14.6835,-85.6073,-90.2499,-112.355 0|0:174:36,5,3,60,37,19,0:36:1367:5,3,60,37,19,0:131,122,2354,1427,748,0:-187.825,-188.387,-298.979,-188.598,-290.42,-299.793,-5.06504,-106.896,-107.107,-99.1093,-81.4977,-183.323,-183.534,0,-182.46,-137.126,-238.95,-239.162,-55.6325,-132.063,-243.506,-198.662,-300.484,-300.696,-117.171,-193.598,-249.226,-310.76 0|0:201:57,0,4,46,58,5,5:57:2170:0,4,46,58,5,5:0,161,1814,2272,197,197:-169.667,-186.826,-364.815,-173.556,-351.545,-350.341,-37.5701,-215.567,-202.297,-201.719,0,-178,-164.73,-28.742,-160.54,-170.618,-348.607,-335.338,-199.359,-161.792,-347.102,-170.618,-348.607,-335.338,-199.359,-161.792,-332.4,-347.102 0|0:191:51,2,14,42,58,8,3:51:1957:2,14,42,58,8,3:12,551,1676,2236,318,118:-168.236,-183.116,-343.143,-138.259,-298.417,-294.677,-45.5485,-205.711,-160.855,-193.541,0,-160.164,-115.307,-22.5947,-143.177,-157.406,-317.562,-272.708,-180.001,-134.453,-315.629,-173.882,-334.038,-289.184,-196.477,-150.93,-308.33,-333.609 dDocent_Contig_976 1 . N A 194.05 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=199;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 1/1:3:0,3:0:0:3:97:-9.05117,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_977 51 . C T 130.035 . AB=0.123711;ABP=122.307;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=297;DPB=297;DPRA=0.97;EPP=29.068;EPPR=615.366;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.836879;PAO=0;PQA=0;PQR=0;PRO=0;QA=464;QR=10893;RO=282;RPL=12;RPP=29.068;RPPR=615.366;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=282;SRP=615.366;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:1146:0:0:0,-8.72987,-103.418 0/0:73:73,0:73:2842:0:0:0,-21.9752,-255.902 0/0:38:38,0:38:1474:0:0:0,-11.4391,-132.913 0/0:60:60,0:60:2328:0:0:0,-18.0618,-209.698 0/1:36:30,6:30:1154:6:239:-11.0473,0,-93.3019 0/1:61:52,6:52:1949:6:225:-2.76895,0,-157.765 dDocent_Contig_978 13 . T C 1055.45 . AB=0.106775;ABP=1826.89;AC=3;AF=0.25;AN=12;AO=179;CIGAR=1X;DP=2763;DPB=2763;DPRA=1.42053;EPP=391.704;EPPR=5611.92;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998839;PAO=0;PQA=0;PQR=0;PRO=0;QA=7060;QR=103893;RO=2583;RPL=0;RPP=391.704;RPPR=5611.92;RPR=179;RUN=1;SAF=179;SAP=391.704;SAR=0;SRF=2583;SRP=5611.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:341:341,0:341:13687:0:0:0,-102.651,-1230.77 0/0:556:549,6:549:22110:6:239:0,-145.552,-1966.04 0/1:354:312,42:312:12525:42:1635:-40.8178,0,-1019.73 0/0:508:480,28:480:19301:28:1095:0,-54.0857,-1636.58 0/1:525:468,57:468:18877:57:2259:-45.4375,0,-1539.22 0/1:479:433,46:433:17393:46:1832:-20.8997,0,-1419.72 dDocent_Contig_979 78 . T C 3417.82 . AB=0.215659;ABP=514.249;AC=3;AF=0.25;AN=12;AO=183;CIGAR=2M1X;DP=1712;DPB=1732.33;DPRA=0;EPP=400.39;EPPR=3182.05;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7119;QR=56994;RO=1464;RPL=183;RPP=400.39;RPPR=3182.05;RPR=0;RUN=1;SAF=183;SAP=400.39;SAR=0;SRF=1464;SRP=3182.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:193:130,19,44:130:4942:19,44:733,1707:-101.121,-80.0587,-479.63,0,-345.094,-392.046 0|1:236:174,18,44:174:6678:18,44:644,1653:-83.038,-82.917,-625.657,0,-495.672,-534.93 0|1:299:218,11,69:218:8551:11,69:422,2732:-159.233,-190.228,-890.081,0,-668.563,-682.423 0|0:271:244,11,15:244:9510:11,15:432,585:0,-37.912,-816.19,-25.3611,-771.424,-802.439 0|0:394:386,0,6:386:15086:0,6:0,243:0,-116.198,-1356.38,-96.0403,-1336.34,-1334.54 0|0:319:312,0,5:312:12227:0,5:0,199:0,-93.9214,-1099.31,-77.4667,-1082.93,-1081.42 dDocent_Contig_980 24 . T A 5541.11 . AB=0.297814;ABP=262.922;AC=6;AF=0.5;AN=12;AO=218;CIGAR=1X;DP=732;DPB=732;DPRA=0;EPP=476.391;EPPR=1119.15;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.87156;PAIREDR=0.90856;PAO=0;PQA=0;PQR=0;PRO=0;QA=8633;QR=20489;RO=514;RPL=0;RPP=476.391;RPPR=1119.15;RPR=218;RUN=1;SAF=218;SAP=476.391;SAR=0;SRF=514;SRP=1119.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:116:77,39:77:3051:39:1551:-104.914,0,-239.753 0/1:132:98,34:98:3895:34:1315:-78.8654,0,-310.814 0/1:110:95,15:95:3799:15:593:-20.5947,0,-308.795 0/1:130:80,50:80:3206:50:1970:-138.361,0,-249.476 0/1:108:70,38:70:2791:38:1538:-106.145,0,-218.78 0/1:136:94,42:94:3747:42:1666:-109.227,0,-296.299 dDocent_Contig_981 13 . T A 69492.6 . AB=0.852596;ABP=647.69;AC=10;AF=0.833333;AN=12;AO=2075;CIGAR=1X;DP=2243;DPB=2243;DPRA=0;EPP=4508.82;EPPR=365.646;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0.999518;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=82468;QR=6689;RO=167;RPL=0;RPP=4508.82;RPPR=365.646;RPR=2075;RUN=1;SAF=2075;SAP=4508.82;SAR=0;SRF=167;SRP=365.646;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:375:27,348:27:1071:348:13769:-1141.55,-16.2059,0 0/1:404:44,360:44:1767:360:14364:-1170.07,0,-37.6271 0/1:193:44,149:44:1755:149:5966:-478.618,0,-100.067 1/1:411:31,380:31:1256:380:15086:-1243.29,-10.418,0 1/1:423:4,418:4:159:418:16649:-1482.42,-112.703,0 1/1:437:17,420:17:681:420:16634:-1434.13,-69.9286,0 dDocent_Contig_982 21 . T A 6627.22 . AB=0.346972;ABP=127.289;AC=6;AF=0.5;AN=12;AO=212;CIGAR=12M2X2M;DP=611;DPB=509.5;DPRA=0;EPP=463.362;EPPR=606.68;GTI=0;LEN=1;MEANALT=2.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8465;QR=10899;RO=278;RPL=0;RPP=463.362;RPPR=606.68;RPR=212;RUN=1;SAF=212;SAP=463.362;SAR=0;SRF=278;SRP=606.68;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:65:45,6,14:45:1766:6,14:205,561:-32.7139,-29.641,-173.07,0,-128.655,-141.072 0|1:188:53,58,76:53:2099:58,76:2028,3051:-235.463,-86.4658,-241.767,0,-7.83529,-149.907 0|1:46:10,20,15:10:387:20,15:690,607:-71.2869,-18.2784,-44.038,-24.2248,0,-51.5087 0|1:176:140,16,19:140:5474:16,19:570,745:-19.1304,-14.8325,-460.053,0,-403.612,-444.347 0|1:66:0,10,54:0:0:10,54:353,2145:-205.386,-176.648,-173.638,-28.7682,0,-12.5126 0|1:70:30,6,34:30:1173:6,34:166,1356:-102.739,-98.6593,-193.288,0,-83.4238,-86.2983 dDocent_Contig_983 28 . G A 152.565 . AB=0.0914543;ABP=969.999;AC=1;AF=0.0833333;AN=12;AO=86;CIGAR=1X;DP=5192;DPB=5192;DPRA=0.87162;EPP=189.757;EPPR=11086.2;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=59.9592;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994318;PAO=0;PQA=0;PQR=0;PRO=0;QA=3362;QR=202537;RO=5104;RPL=0;RPP=189.757;RPPR=11086.2;RPR=86;RUN=1;SAF=86;SAP=189.757;SAR=0;SRF=5104;SRP=11086.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:667:606,61:606:23875:61:2399:-15.2742,0,-1945.83 0/0:1008:1006,2:1006:39945:2:82:0,-295.659,-3583.47 0/0:644:635,8:635:25270:8:314:0,-165.348,-2243.44 0/0:955:942,13:942:37469:13:490:0,-243.056,-3323.94 0/0:969:969,0:969:38454:0:0:0,-291.698,-3457.12 0/0:949:946,2:946:37524:2:77:0,-278.469,-3366.31 dDocent_Contig_984 40 . G A 681.025 . AB=0.125;ABP=589.308;AC=4;AF=0.333333;AN=12;AO=70;CIGAR=1X;DP=755;DPB=755;DPRA=0;EPP=155.013;EPPR=1488.3;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.942857;PAIREDR=0.935673;PAO=0;PQA=0;PQR=0;PRO=0;QA=2730;QR=26898;RO=684;RPL=0;RPP=155.013;RPPR=1488.3;RPR=70;RUN=1;SAF=70;SAP=155.013;SAR=0;SRF=684;SRP=1488.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:122:118,4:118:4620:4:156:0,-22.3115,-401.333 0/0:153:147,6:147:5758:6:199:0,-27.835,-499.84 0/1:90:80,10:80:3165:10:390:-8.36324,0,-257.835 0/1:128:111,16:111:4419:16:627:-18.1321,0,-359.031 0/1:124:110,14:110:4328:14:559:-13.3255,0,-352.169 0/1:138:118,20:118:4608:20:799:-30.6871,0,-373.118 dDocent_Contig_985 96 . A G 202.559 . AB=0.166667;ABP=101.45;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1X;DP=410;DPB=410;DPRA=0.805732;EPP=52.9542;EPPR=841.199;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.173913;PAIREDR=0.505181;PAO=0;PQA=0;PQR=0;PRO=0;QA=761;QR=13019;RO=386;RPL=23;RPP=52.9542;RPPR=841.199;RPR=0;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=386;SRP=841.199;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:48:42,6:42:1426:6:204:-4.24442,0,-114.186 0/0:87:82,5:82:2792:5:158:0,-11.657,-237.002 0/1:54:43,11:43:1453:11:364:-16.8251,0,-114.806 0/0:64:63,1:63:2115:1:35:0,-15.7673,-187.121 0/0:73:72,0:72:2441:0:0:0,-21.6742,-219.772 0/0:84:84,0:84:2792:0:0:0,-25.2865,-251.526 dDocent_Contig_986 89 . G C 1596.88 . AB=0.2;ABP=409.51;AC=3;AF=0.25;AN=12;AO=112;CIGAR=1X;DP=1120;DPB=1120;DPRA=1.12544;EPP=246.215;EPPR=2189.68;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.995035;PAO=0;PQA=0;PQR=0;PRO=0;QA=3800;QR=34715;RO=1007;RPL=112;RPP=246.215;RPPR=2189.68;RPR=0;RUN=1;SAF=112;SAP=246.215;SAR=0;SRF=1007;SRP=2189.68;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:173:146,26:146:5015:26:908:-29.9105,0,-399.402 0/1:216:162,54:162:5590:54:1810:-98.154,0,-438.233 0/1:131:107,24:107:3702:24:804:-33.2335,0,-293.967 0/0:208:206,2:206:7117:2:70:0,-55.9668,-633.99 0/0:169:169,0:169:5821:0:0:0,-50.8741,-524.04 0/0:223:217,6:217:7470:6:208:0,-48.07,-653.334 dDocent_Contig_987 17 . T A 44692.1 . AB=0.826211;ABP=976.294;AC=7;AF=0.583333;AN=12;AO=1371;CIGAR=1X;DP=1574;DPB=1574;DPRA=0;EPP=2980.1;EPPR=443.819;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.960591;PAO=0;PQA=0;PQR=0;PRO=0;QA=54062;QR=8177;RO=203;RPL=0;RPP=2980.1;RPPR=443.819;RPR=1371;RUN=1;SAF=1371;SAP=2980.1;SAR=0;SRF=203;SRP=443.819;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:157:34,123:34:1370:123:4835:-387.817,0,-76.2962 0/1:118:34,84:34:1369:84:3321:-263.442,0,-87.9448 0/1:104:41,63:41:1644:63:2497:-193.576,0,-116.883 0/1:201:29,172:29:1174:172:6793:-550.604,0,-45.4293 1/1:521:20,501:20:811:501:19736:-1701.42,-83.5308,0 0/1:473:45,428:45:1809:428:16880:-1375.56,0,-20.6349 dDocent_Contig_988 27 . T C 120.687 . AB=0.155556;ABP=49.3833;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=632;DPB=632;DPRA=0.408046;EPP=37.7539;EPPR=1340.64;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998377;PAO=0;PQA=0;PQR=0;PRO=0;QA=646;QR=24628;RO=616;RPL=0;RPP=37.7539;RPPR=1340.64;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=616;SRP=1340.64;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:70:65,5:65:2603:5:200:0,-2.69368,-216.023 0/0:68:66,2:66:2634:2:82:0,-12.6904,-229.411 0/1:45:38,7:38:1514:7:284:-12.3874,0,-122.96 0/0:101:99,2:99:3970:2:80:0,-22.8125,-349.695 0/0:148:148,0:148:5903:0:0:0,-44.5524,-531.07 0/0:200:200,0:200:8004:0:0:0,-60.206,-719.941 dDocent_Contig_989 1 . N A 4171.58 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=124;CIGAR=1X1M6I2M;DP=125;DPB=312.5;DPRA=0;EPP=272.273;EPPR=0;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4613;QR=0;RO=0;RPL=0;RPP=272.273;RPPR=0;RPR=124;RUN=1;SAF=124;SAP=272.273;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:27:0,26:0:0:26:950:-85.4954,-7.82678,0 1|1:17:0,17:0:0:17:632:-57.2162,-5.11751,0 1|1:44:0,44:0:0:44:1643:-148.148,-13.2453,0 1|1:36:0,36:0:0:36:1350:-121.795,-10.8371,0 .:.:.:.:.:.:.:. 1|1:1:0,1:0:0:1:38:-3.79727,-0.30103,0 dDocent_Contig_990 83 . T C 26459 . AB=0.670529;ABP=351.831;AC=6;AF=0.5;AN=12;AO=926;CIGAR=1X;DP=1381;DPB=1381;DPRA=0;EPP=2013.79;EPPR=982.344;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.988914;PAO=0;PQA=0;PQR=0;PRO=0;QA=34053;QR=16336;RO=451;RPL=926;RPP=2013.79;RPPR=982.344;RPR=0;RUN=1;SAF=926;SAP=2013.79;SAR=0;SRF=451;SRP=982.344;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:172:58,112:58:2047:112:4020:-310.586,0,-133.103 0/1:221:88,133:88:3104:133:4750:-361.1,0,-213.055 0/1:268:91,175:91:3426:175:6586:-512.262,0,-228.087 0/1:225:96,129:96:3532:129:4851:-368.91,0,-250.284 0/1:243:65,178:65:2281:178:6396:-502.544,0,-132.392 0/1:252:53,199:53:1946:199:7450:-594.501,0,-99.5206 dDocent_Contig_991 45 . A T 2265.42 . AB=0.234597;ABP=261.199;AC=6;AF=0.5;AN=12;AO=99;CIGAR=1X;DP=422;DPB=422;DPRA=0;EPP=209.388;EPPR=704.396;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.777778;PAIREDR=0.783282;PAO=0;PQA=0;PQR=0;PRO=0;QA=3951;QR=12553;RO=323;RPL=1;RPP=209.388;RPPR=704.396;RPR=98;RUN=1;SAF=99;SAP=217.986;SAR=0;SRF=323;SRP=704.396;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:62:48,14:48:1881:14:545:-30.7209,0,-150.848 0/1:82:70,12:70:2673:12:486:-19.4057,0,-216.045 0/1:57:47,10:47:1834:10:407:-19.8319,0,-148.128 0/1:80:60,20:60:2388:20:798:-48.0546,0,-191.003 0/1:66:48,18:48:1869:18:708:-44.1774,0,-148.57 0/1:75:50,25:50:1908:25:1007:-68.3484,0,-149.35 dDocent_Contig_992 44 . T C 13678 . AB=0.45229;ABP=23.7305;AC=6;AF=0.5;AN=12;AO=474;CIGAR=1X;DP=1048;DPB=1048;DPRA=0;EPP=1023.62;EPPR=1242.92;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.989492;PAO=0;PQA=0;PQR=0;PRO=0;QA=18738;QR=22710;RO=571;RPL=1;RPP=1023.62;RPPR=1242.92;RPR=473;RUN=1;SAF=474;SAP=1032.29;SAR=0;SRF=571;SRP=1242.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:123:69,54:69:2725:54:2152:-156.835,0,-208.352 0/1:153:131,22:131:5205:22:874:-32.9126,0,-422.268 0/1:103:84,18:84:3346:18:718:-34.1307,0,-270.392 0/1:190:160,30:160:6387:30:1198:-50.8999,0,-517.369 0/1:302:63,237:63:2522:237:9342:-749.498,0,-136.399 0/1:177:64,113:64:2525:113:4454:-347.522,0,-174.104 dDocent_Contig_993 40 . G A 428.699 . AB=0.103759;ABP=909.899;AC=3;AF=0.25;AN=12;AO=86;CIGAR=1X;DP=1457;DPB=1457;DPRA=0.82938;EPP=189.757;EPPR=2962.73;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3382;QR=53630;RO=1363;RPL=0;RPP=189.757;RPPR=2962.73;RPR=86;RUN=1;SAF=86;SAP=189.757;SAR=0;SRF=1363;SRP=2962.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:136:115,21:115:4467:21:815:-32.7225,0,-361.034 0/1:252:229,22:229:9071:22:874:-3.32023,0,-740.216 0/1:277:251,26:251:9940:26:1017:-8.43643,0,-810.604 0/0:244:226,17:226:8872:17:676:0,-12.335,-736.819 0/0:232:232,0:232:9119:0:0:0,-69.839,-820.194 0/0:316:310,0:310:12161:0:0:0,-93.3193,-1093.3 dDocent_Contig_994 7 . T G 59494.9 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=2132;CIGAR=1X;DP=2218;DPB=2218;DPRA=0;EPP=4632.59;EPPR=157.185;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.755629;PAIREDR=0.746479;PAO=0;PQA=0;PQR=0;PRO=0;QA=67185;QR=1065;RO=71;RPL=0;RPP=4632.59;RPPR=157.185;RPR=2132;RUN=1;SAF=2132;SAP=4632.59;SAR=0;SRF=71;SRP=157.185;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:273:9,262:9:159:262:8324:-734.62,-67.2158,0 1/1:406:10,394:10:132:394:12145:-1080.81,-109.718,0 1/1:265:7,257:7:95:257:8209:-730.07,-70.8998,0 1/1:415:13,398:13:179:398:12811:-1136.39,-107.783,0 1/1:355:17,336:17:268:336:10510:-921.469,-82.1958,0 1/1:504:15,485:15:232:485:15186:-1345.35,-129.642,0 dDocent_Contig_995 24 . G A 228.528 . AB=0.105991;ABP=295.619;AC=1;AF=0.0833333;AN=12;AO=38;CIGAR=1M1X5M;DP=1158;DPB=1185.71;DPRA=1.06417;EPP=85.5263;EPPR=2274.37;GTI=0;LEN=1;MEANALT=5.66667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1532;QR=39847;RO=1046;RPL=0;RPP=85.5263;RPPR=2274.37;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=1046;SRP=2274.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:182:157,5,6,12:157:5968:5,6,12:188,241,474:0,-32.0508,-519.965,-27.3998,-501.61,-515.02,-8.25339,-482.464,-477.82,-494.067 0|1:217:176,13,23,0:176:6689:13,23,0:502,924,0:-23.1715,-35.4267,-580.049,0,-507.82,-541.627,-76.1528,-583.963,-548.551,-624.693 0|0:138:123,0,0,10:123:4708:0,0,10:0,0,398:0,-37.0267,-423.378,-37.0267,-423.378,-423.378,-4.216,-390.605,-390.605,-387.595 0|0:198:178,4,9,4:178:6775:4,9,4:158,367,147:0,-40.7766,-595.24,-23.2948,-566.164,-576.263,-41.5751,-584.429,-566.958,-596.033 0|0:211:203,6,0,1:203:7720:6,0,1:232,0,40:0,-42.3256,-673.626,-61.1091,-675.432,-694.233,-57.8123,-672.137,-690.938,-690.637 0|0:212:209,0,0,0:209:7987:0,0,0:0,0,0:0,-62.9153,-718.258,-62.9153,-718.258,-718.258,-62.9153,-718.258,-718.258,-718.258 dDocent_Contig_996 19 . T G 16169 . AB=0.764444;ABP=413.013;AC=6;AF=0.5;AN=12;AO=516;CIGAR=2X;DP=675;DPB=675;DPRA=0;EPP=1123.49;EPPR=348.274;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.96124;PAIREDR=0.987421;PAO=0;PQA=0;PQR=0;PRO=0;QA=20263;QR=6355;RO=159;RPL=0;RPP=1123.49;RPPR=348.274;RPR=516;RUN=1;SAF=516;SAP=1123.49;SAR=0;SRF=159;SRP=348.274;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:89:21,68:21:837:68:2658:-212.577,0,-48.8537 0|1:100:28,72:28:1114:72:2830:-224.719,0,-70.4433 0|1:105:35,70:35:1397:70:2769:-217.724,0,-94.3784 0|1:125:30,95:30:1204:95:3735:-298.563,0,-71.0021 0|1:127:28,99:28:1116:99:3906:-313.316,0,-62.4973 0|1:129:17,112:17:687:112:4365:-353.996,0,-23.3274 dDocent_Contig_997 7 . T G 138057 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=4846;CIGAR=1X;DP=5051;DPB=5051;DPRA=0;EPP=10526;EPPR=400.39;GTI=0;LEN=1;MEANALT=2.66667;MQM=59.9944;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.800041;PAIREDR=0.863388;PAO=0;PQA=0;PQR=0;PRO=0;QA=155968;QR=2505;RO=183;RPL=0;RPP=10526;RPPR=400.39;RPR=4846;RUN=1;SAF=4846;SAP=10526;SAR=0;SRF=183;SRP=400.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:758:28,724:28:362:724:23198:-2053.78,-193.903,0 1/1:732:26,704:26:322:704:22628:-2006.68,-190.759,0 1/1:704:25,674:25:375:674:21584:-1907.98,-176.648,0 1/1:876:28,844:28:441:844:26981:-2387.48,-222.771,0 1/1:852:32,816:32:425:816:26483:-2344.14,-217.005,0 1/1:1129:44,1084:44:580:1084:35094:-3104.78,-287.401,0 dDocent_Contig_998 38 . T C 5556.03 . AB=0.150715;ABP=2449.81;AC=5;AF=0.416667;AN=12;AO=377;CIGAR=1X;DP=3074;DPB=3074;DPRA=0;EPP=821.655;EPPR=5857.3;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.931034;PAIREDR=0.999258;PAO=0;PQA=0;PQR=0;PRO=0;QA=15043;QR=100548;RO=2696;RPL=0;RPP=821.655;RPPR=5857.3;RPR=377;RUN=1;SAF=377;SAP=821.655;SAR=0;SRF=2696;SRP=5857.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:464:400,64:400:14856:64:2552:-90.1396,0,-1196.71 0/1:512:390,122:390:14560:122:4885:-285.417,0,-1155.64 0/1:279:249,30:249:9342:30:1189:-23.3005,0,-756.51 0/1:620:546,74:546:20250:74:2979:-81.5609,0,-1634.88 0/1:434:375,58:375:14021:58:2322:-78.3857,0,-1130.56 0/0:765:736,29:736:27519:29:1116:0,-129.575,-2374.46 dDocent_Contig_999 96 . C T 243.901 . AB=0.119748;ABP=600.822;AC=1;AF=0.0833333;AN=12;AO=143;CIGAR=1X;DP=2651;DPB=2651;DPRA=0;EPP=313.531;EPPR=5431.69;GTI=0;LEN=1;MEANALT=1.5;MQM=56.1608;MQMR=57.2592;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.3216;PAO=0;PQA=0;PQR=0;PRO=0;QA=4642;QR=83723;RO=2500;RPL=143;RPP=313.531;RPPR=5431.69;RPR=0;RUN=1;SAF=143;SAP=313.531;SAR=0;SRF=2500;SRP=5431.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:342:330,9:330:11055:9:301:0,-75.7208,-959.532 0/0:540:519,20:519:17371:20:656:0,-104.885,-1495.8 0/0:364:361,3:361:12066:3:104:0,-99.8718,-1066.8 0/0:452:435,13:435:14566:13:450:0,-96.6206,-1254.84 0/1:476:419,57:419:14079:57:1864:-24.7088,0,-1114.62 0/0:477:436,41:436:14586:41:1267:0,-34.1889,-1187.77 dDocent_Contig_1000 25 . G T 6031.47 . AB=0.346386;ABP=139.107;AC=2;AF=0.166667;AN=12;AO=246;CIGAR=1X;DP=1515;DPB=1515;DPRA=0;EPP=537.193;EPPR=2756.44;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9560;QR=49925;RO=1268;RPL=0;RPP=537.193;RPPR=2756.44;RPR=246;RUN=1;SAF=246;SAP=537.193;SAR=0;SRF=1268;SRP=2756.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:212:204,8:204:8062:8:306:0,-35.9185,-697.253 0/0:202:201,1:201:7864:1:40:0,-56.8124,-703.373 0/0:226:224,1:224:8826:1:41:0,-64.0417,-789.75 0/0:211:205,6:205:8111:6:241:0,-41.451,-707.509 0/1:349:208,141:208:8164:141:5501:-389.918,0,-629.274 0/1:315:226,89:226:8898:89:3431:-214.043,0,-705.477 dDocent_Contig_1001 192 . C T 1659.17 . AB=0.313364;ABP=68.6648;AC=4;AF=0.333333;AN=12;AO=68;CIGAR=1X;DP=781;DPB=781;DPRA=0.192376;EPP=150.67;EPPR=1551.27;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2582;QR=28072;RO=713;RPL=68;RPP=150.67;RPPR=1551.27;RPR=0;RUN=1;SAF=0;SAP=150.67;SAR=68;SRF=0;SRP=1551.27;SRR=713;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:45:33,12:33:1325:12:448:-27.101,0,-105.962 0/1:36:29,7:29:1141:7:285:-15.1873,0,-92.1314 0/1:33:25,8:25:989:8:292:-16.6825,0,-79.3696 0/1:103:62,41:62:2457:41:1557:-109.352,0,-190.271 0/0:270:270,0:270:10702:0:0:0,-81.2781,-962.464 0/0:294:294,0:294:11458:0:0:0,-88.5028,-1030.48 dDocent_Contig_1002 106 . N T 492.55 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=16;CIGAR=2X;DP=17;DPB=17;DPRA=0;EPP=37.7539;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=40;MQMR=0;NS=6;NUMALT=1;ODDS=2.1684e-19;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=533;QR=0;RO=0;RPL=0;RPP=37.7539;RPPR=0;RPR=16;RUN=1;SAF=0;SAP=37.7539;SAR=16;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:7:0,7:0:0:7:228:-20.3709,-2.10721,0 1|1:3:0,2:0:0:2:70:-6.26399,-0.60206,0 1|1:1:0,1:0:0:1:34:-3.30271,-0.30103,0 1|1:1:0,1:0:0:1:28:-2.77347,-0.30103,0 1|1:1:0,1:0:0:1:35:-3.3807,-0.30103,0 1|1:4:0,4:0:0:4:138:-12.3643,-1.20412,0 dDocent_Contig_1003 107 . N T 102.78 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=103;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 dDocent_Contig_1004 27 . C G 32.122 . AB=0.097561;ABP=60.6867;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=15M1X;DP=185;DPB=184.625;DPRA=1.42361;EPP=11.6962;EPPR=383.018;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.782857;PAO=0;PQA=0;PQR=0;PRO=0;QA=163;QR=6874;RO=175;RPL=0;RPP=11.6962;RPPR=383.018;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=175;SRP=383.018;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:27:26,1,0:26:1022:1,0:33,0:0,-4.82867,-88.9826,-7.82678,-89.2837,-91.9495 0|0:27:27,0,0:27:1055:0,0:0,0:0,-8.12781,-95.2493,-8.12781,-95.2493,-95.2493 0|0:21:21,0,0:21:832:0,0:0,0:0,-6.32163,-75.1988,-6.32163,-75.1988,-75.1988 0|1:41:33,3,4:33:1292:3,4:111,163:-3.53069,-4.39564,-109.717,0,-97.1709,-105.046 0|0:35:34,1,0:34:1339:1,0:37,0:0,-6.83822,-117.087,-10.235,-117.388,-120.414 0|0:34:34,0,0:34:1334:0,0:0,0:0,-10.235,-120.335,-10.235,-120.335,-120.335 dDocent_Contig_1005 3 . A G 7681.91 . AB=0.125285;ABP=538.414;AC=1;AF=0.0833333;AN=12;AO=55;CIGAR=1X5I1M1X7M;DP=549;DPB=938.1;DPRA=0;EPP=122.441;EPPR=0;GTI=0;LEN=1;MEANALT=9.5;MQM=44.4727;MQMR=0;NS=6;NUMALT=8;ODDS=0;PAIRED=0.981818;PAIREDR=0;PAO=42.5714;PQA=1599.43;PQR=3119.43;PRO=83.5714;QA=1781;QR=0;RO=0;RPL=0;RPP=122.441;RPPR=0;RPR=55;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:101:0,8,1,0,8,50,23,1,5:0:0:8,1,0,8,50,23,1,5:237,16,0,151,1157,768,21,132:-138.671,-120.113,-117.705,-137.8,-119.242,-137.499,-138.671,-120.113,-137.8,-138.671,-129.446,-110.889,-128.574,-129.446,-127.037,-60.2671,-41.7203,-59.3984,-60.2671,-51.0653,-45.2156,-78.3748,-59.815,-77.5035,-78.3748,-69.1508,0,-71.4511,-137.353,-118.795,-136.481,-137.353,-128.127,-58.9508,-77.0563,-137.052,-129.043,-110.486,-128.172,-129.043,-119.818,-50.6482,-68.7465,-127.725,-127.538 0|0:136:0,13,0,0,2,46,49,15,4:0:0:13,0,0,2,46,49,15,4:433,0,0,26,1103,1644,225,134:-207.24,-172.474,-168.561,-207.24,-172.474,-207.24,-207.24,-172.474,-207.24,-207.24,-206.027,-171.261,-206.027,-206.027,-205.425,-129.072,-94.3078,-129.072,-129.072,-127.861,-115.224,-78.1587,-43.385,-78.1587,-78.1587,-76.9465,0,-63.4082,-195.496,-160.732,-195.496,-195.496,-194.284,-117.346,-66.4234,-190.981,-196.602,-161.835,-196.602,-196.602,-195.388,-118.434,-67.5182,-184.858,-195.397 0|0:120:0,12,0,0,8,68,15,4,7:0:0:12,0,0,8,68,15,4,7:405,0,0,229,1526,505,60,230:-142.727,-110.168,-106.556,-142.727,-110.168,-142.727,-142.727,-110.168,-142.727,-142.727,-125.522,-92.9621,-125.522,-125.522,-123.114,-39.6335,-7.08098,-39.6335,-39.6335,-22.4393,-19.1634,-103.084,-70.5218,-103.084,-103.084,-85.8771,0,-98.5681,-139.595,-107.036,-139.595,-139.595,-122.39,-36.5137,-99.9515,-138.391,-124.535,-91.9752,-124.535,-124.535,-107.33,-21.4464,-84.8902,-121.403,-122.428 1|0:82:0,22,0,0,9,21,17,5,4:0:0:22,0,0,9,21,17,5,4:706,0,0,249,494,565,75,128:-100.575,-44.3427,-37.7201,-100.575,-44.3427,-100.575,-100.575,-44.3427,-100.575,-100.575,-82.5739,-26.3432,-82.5739,-82.5739,-79.8646,-66.7766,-10.5588,-66.7766,-66.7766,-48.7832,-60.455,-56.2372,0,-56.2372,-56.2372,-38.237,-22.4482,-51.1197,-96.6655,-40.4374,-96.6655,-96.6655,-78.6664,-62.8742,-52.3305,-95.1603,-90.6661,-34.4334,-90.6661,-90.6661,-72.6653,-56.8698,-46.3279,-86.7572,-89.462 0|0:72:0,0,7,0,1,33,0,0,28:0:0:0,7,0,1,33,0,0,28:0,246,0,15,712,0,0,959:-121.651,-121.651,-121.651,-102.139,-102.139,-100.032,-121.651,-121.651,-102.139,-121.651,-120.87,-120.87,-101.359,-120.87,-120.569,-75.2902,-75.2902,-55.8102,-75.2902,-74.5157,-65.3562,-121.651,-121.651,-102.139,-121.651,-120.87,-75.2902,-121.651,-121.651,-121.651,-102.139,-121.651,-120.87,-75.2902,-121.651,-121.651,-45.9667,-45.9667,-26.4584,-45.9667,-45.1882,0,-45.9667,-45.9667,-37.5379 0|0:38:0,0,2,2,0,12,1,1,17:0:0:0,2,2,0,12,1,1,17:0,70,54,0,261,32,15,572:-61.3238,-61.3238,-61.3238,-55.8464,-55.8464,-55.2444,-57.3709,-57.3709,-51.8946,-56.7689,-61.3238,-61.3238,-55.8464,-57.3709,-61.3238,-44.3074,-44.3074,-38.8426,-40.3695,-44.3074,-40.695,-58.8058,-58.8058,-53.3288,-54.8534,-58.8058,-41.7957,-58.5047,-60.5482,-60.5482,-55.0715,-56.5962,-60.5482,-43.5406,-58.0306,-60.2472,-16.6702,-16.6702,-11.2082,-12.7369,-16.6702,0,-14.16,-15.9069,-11.5527 dDocent_Contig_1007 11 . A G 373.525 . AB=0.238806;ABP=42.7126;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=148;DPB=148;DPRA=1.65432;EPP=37.7539;EPPR=289.645;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=640;QR=5102;RO=132;RPL=0;RPP=37.7539;RPPR=289.645;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=132;SRP=289.645;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:386:0:0:0,-3.0103,-35.0925 0/0:11:11,0:11:432:0:0:0,-3.31133,-39.2344 0/0:44:44,0:44:1691:0:0:0,-13.2453,-152.428 0/0:16:16,0:16:615:0:0:0,-4.81648,-55.6829 0/1:29:21,8:21:832:8:318:-20.2568,0,-66.4674 0/1:38:30,8:30:1146:8:322:-17.9094,0,-91.982 dDocent_Contig_1008 18 . A G 18402.4 . AB=0.438824;ABP=50.5675;AC=4;AF=0.333333;AN=12;AO=668;CIGAR=1X;DP=2246;DPB=2246;DPRA=0;EPP=1453.55;EPPR=3429.59;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=26394;QR=63222;RO=1578;RPL=0;RPP=1453.55;RPPR=3429.59;RPR=668;RUN=1;SAF=668;SAP=1453.55;SAR=0;SRF=1578;SRP=3429.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:381:198,183:198:7908:183:7279:-540.068,0,-596.601 0/1:382:233,149:233:9314:149:5885:-414.447,0,-722.68 0/1:232:124,108:124:4977:108:4271:-314.519,0,-377.961 0/1:468:266,202:266:10677:202:7943:-573.608,0,-819.31 0/0:422:399,23:399:15970:23:896:0,-46.0942,-1355.06 0/0:361:358,3:358:14376:3:120:0,-97.4845,-1281.5 dDocent_Contig_1009 27 . A G 124.304 . AB=0.109375;ABP=172.657;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=642;DPB=642;DPRA=1.24457;EPP=42.0968;EPPR=1358.01;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=0.9375;PAO=0;PQA=0;PQR=0;PRO=0;QA=728;QR=24845;RO=624;RPL=0;RPP=42.0968;RPPR=1358.01;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=624;SRP=1358.01;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:106:105,1:105:4168:1:41:0,-27.8146,-371 0/1:128:114,14:114:4517:14:566:-12.7492,0,-367.941 0/0:58:58,0:58:2335:0:0:0,-17.4597,-210.304 0/0:126:126,0:126:5073:0:0:0,-37.9298,-456.431 0/0:109:107,2:107:4234:2:81:0,-25.1265,-373.33 0/0:115:114,1:114:4518:1:40:0,-30.6228,-402.565 dDocent_Contig_1010 22 . T C 5816.7 . AB=0.169239;ABP=1788.55;AC=2;AF=0.166667;AN=12;AO=319;CIGAR=1X;DP=4807;DPB=4807;DPRA=1.32672;EPP=695.71;EPPR=9748.58;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.996865;PAIREDR=0.999777;PAO=0;PQA=0;PQR=0;PRO=0;QA=12796;QR=175822;RO=4488;RPL=0;RPP=695.71;RPPR=9748.58;RPR=319;RUN=1;SAF=319;SAP=695.71;SAR=0;SRF=4488;SRP=9748.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:664:664,0:664:25927:0:0:0,-199.884,-2331.39 0/0:862:861,1:861:33680:1:33:0,-256.189,-3025.16 0/0:598:598,0:598:23539:0:0:0,-180.016,-2116.59 0/0:804:804,0:804:31491:0:0:0,-242.028,-2831.57 0/1:953:764,189:764:29990:189:7578:-394.736,0,-2409.78 0/1:926:797,129:797:31195:129:5185:-187.748,0,-2526.21 dDocent_Contig_1011 19 . T C 38.2908 . AB=0.125;ABP=32.3252;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=283;DPB=283;DPRA=0.695238;EPP=11.6962;EPPR=608.851;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=0.25;PAIREDR=0.448029;PAO=0;PQA=0;PQR=0;PRO=0;QA=163;QR=11159;RO=279;RPL=0;RPP=11.6962;RPPR=608.851;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=279;SRP=608.851;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:52:52,0:52:2081:0:0:0,-15.6536,-187.462 0/0:52:52,0:52:2079:0:0:0,-15.6536,-187.293 0/1:24:21,3:21:842:3:122:-4.14777,0,-68.868 0/0:58:58,0:58:2328:0:0:0,-17.4597,-209.671 0/0:49:48,1:48:1919:1:41:0,-10.6559,-168.815 0/0:48:48,0:48:1910:0:0:0,-14.4494,-172.107 dDocent_Contig_1012 10 . T G 299.581 . AB=0.0945205;ABP=1045.51;AC=2;AF=0.166667;AN=12;AO=112;CIGAR=1X;DP=2216;DPB=2216;DPRA=0.900759;EPP=246.215;EPPR=4567.45;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999049;PAO=0;PQA=0;PQR=0;PRO=0;QA=4490;QR=75941;RO=2102;RPL=0;RPP=246.215;RPPR=4567.45;RPR=112;RUN=1;SAF=112;SAP=246.215;SAR=0;SRF=2102;SRP=4567.45;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:336:305,31:305:11110:31:1245:-11.17,0,-898.501 0/0:409:384,24:384:13889:24:960:0,-36.2369,-1162.96 0/0:286:267,19:267:9690:19:752:0,-18.0993,-803.945 0/1:394:356,38:356:12802:38:1533:-19.6017,0,-1033.28 0/0:465:464,0:464:16681:0:0:0,-139.678,-1500.43 0/0:326:326,0:326:11769:0:0:0,-98.1358,-1058.94 dDocent_Contig_1013 15 . T C 12968.1 . AB=0.580468;ABP=43.8979;AC=6;AF=0.5;AN=12;AO=422;CIGAR=1X;DP=727;DPB=727;DPRA=0;EPP=919.372;EPPR=665.309;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.78673;PAIREDR=0.767213;PAO=0;PQA=0;PQR=0;PRO=0;QA=16878;QR=12127;RO=305;RPL=0;RPP=919.372;RPPR=665.309;RPR=422;RUN=1;SAF=422;SAP=919.372;SAR=0;SRF=305;SRP=665.309;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:100:53,47:53:2122:47:1893:-140.467,0,-161.052 0/1:139:65,74:65:2574:74:2965:-225.097,0,-189.951 0/1:112:36,76:36:1425:76:2991:-235.568,0,-94.7892 0/1:133:42,91:42:1665:91:3622:-285.97,0,-110.032 0/1:99:48,51:48:1934:51:2060:-155.777,0,-144.453 0/1:144:61,83:61:2407:83:3347:-257.926,0,-173.427 dDocent_Contig_1014 9 . A G 5680.95 . AB=0.589506;ABP=25.5561;AC=6;AF=0.5;AN=12;AO=191;CIGAR=1X1M2X3M1X;DP=324;DPB=324.5;DPRA=0;EPP=417.762;EPPR=198.443;GTI=0;LEN=1;MEANALT=2.5;MQM=58.7435;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7370;QR=3506;RO=90;RPL=0;RPP=417.762;RPPR=198.443;RPR=191;RUN=1;SAF=191;SAP=417.762;SAR=0;SRF=90;SRP=198.443;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:35:21,12,2,0:21:803:12,2,0:463,75,0:-31.7094,0,-62.2764,-31.8891,-59.7459,-97.1669,-38.0311,-65.8888,-97.769,-103.912 0|1:81:16,57,7,0:16:631:57,7,0:2212,280,0:-174.517,0,-34.7544,-156.266,-28.8464,-206.079,-179.333,-51.9131,-208.186,-231.253 0|1:57:9,40,0,8:9:345:40,0,8:1532,0,302:-121.82,0,-16.2755,-124.529,-28.3167,-152.843,-99.7832,-3.57324,-128.097,-125.689 0|1:27:10,11,4,0:10:398:11,4,0:431,160,0:-30.028,0,-29.4848,-19.8472,-19.6104,-51.4346,-33.0383,-32.7961,-52.6387,-65.823 0|1:50:13,33,4,0:13:509:33,4,0:1277,160,0:-100.945,0,-31.9122,-91.6769,-28.6641,-132.327,-104.858,-41.8462,-133.531,-146.712 0|1:74:21,38,15,0:21:820:38,15,0:1455,592,0:-113.073,0,-55.9653,-70.6807,-18.6924,-133.575,-119.394,-67.4044,-138.09,-186.802 dDocent_Contig_1015 33 . T G 636.491 . AB=0.120155;ABP=649.671;AC=1;AF=0.0833333;AN=12;AO=152;CIGAR=2X;DP=2518;DPB=2518;DPRA=1.13228;EPP=333.074;EPPR=5116.83;GTI=0;LEN=1;MEANALT=2.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997452;PAO=0;PQA=0;PQR=0;PRO=0;QA=5909;QR=93612;RO=2355;RPL=0;RPP=333.074;RPPR=5116.83;RPR=152;RUN=1;SAF=152;SAP=333.074;SAR=0;SRF=2355;SRP=5116.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:393:361,30:361:14367:30:1169:0,-12.6157,-1186.47 0|0:573:533,39:533:21157:39:1490:0,-38.1336,-1768.02 0|0:384:365,18:365:14533:18:706:0,-51.8362,-1243.01 0|1:516:449,62:449:17828:62:2422:-63.9679,0,-1448.92 0|0:378:378,0:378:14994:0:0:0,-113.789,-1348.35 0|0:274:269,3:269:10733:3:122:0,-70.9128,-953.891 dDocent_Contig_1016 84 . C T 1824.01 . AB=0.253165;ABP=212.049;AC=6;AF=0.5;AN=12;AO=100;CIGAR=1X;DP=395;DPB=395;DPRA=0;EPP=220.158;EPPR=643.595;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.74;PAIREDR=0.637288;PAO=0;PQA=0;PQR=0;PRO=0;QA=3371;QR=10092;RO=295;RPL=96;RPP=186.804;RPPR=643.595;RPR=4;RUN=1;SAF=96;SAP=186.804;SAR=4;SRF=295;SRP=643.595;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:72:54,18:54:1856:18:605:-33.0928,0,-145.65 0/1:91:75,16:75:2565:16:534:-20.9843,0,-203.717 0/1:49:29,20:29:980:20:677:-46.4973,0,-73.7559 0/1:59:37,22:37:1269:22:728:-48.0675,0,-96.7509 0/1:32:27,5:27:936:5:167:-5.72614,0,-74.9222 0/1:92:73,19:73:2486:19:660:-32.0303,0,-196.306 dDocent_Contig_1017 23 . T A 272.702 . AB=0.179487;ABP=72.6088;AC=3;AF=0.25;AN=12;AO=15;CIGAR=1X;DP=157;DPB=157;DPRA=1.56579;EPP=35.5824;EPPR=311.359;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.533333;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=610;QR=5718;RO=142;RPL=0;RPP=35.5824;RPPR=311.359;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=142;SRP=311.359;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:29:21,8:21:841:8:327:-21.0702,0,-67.2693 0/1:25:22,3:22:879:3:120:-3.66156,0,-71.8943 0/0:41:40,1:40:1615:1:41:0,-8.24766,-141.479 0/0:25:25,0:25:1010:0:0:0,-7.52575,-91.1935 0/0:13:13,0:13:531:0:0:0,-3.91339,-48.1364 0/1:24:21,3:21:842:3:122:-4.14777,0,-68.8668 dDocent_Contig_1018 49 . T A 49.2114 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=24;CIGAR=2M1X;DP=2191;DPB=2182;DPRA=0.726846;EPP=55.1256;EPPR=4350.3;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.9995;PAO=0;PQA=0;PQR=0;PRO=0;QA=923;QR=78233;RO=2002;RPL=0;RPP=55.1256;RPPR=4350.3;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=2002;SRP=4350.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:325:282,17,18,1,7:282:11011:17,18,1,7:671,726,37,281:0,-29.6858,-929.702,-25.0426,-874.974,-924.763,-81.8641,-931.792,-927.155,-986.699,-61.7358,-911.665,-907.027,-963.846,-964.765 0|0:408:372,0,36,0,0:372:14550:0,36,0,0:0,1420,0,0:-5.23989,-117.223,-1313.47,0,-1196.64,-1185.8,-117.223,-1313.47,-1196.64,-1313.47,-117.223,-1313.47,-1196.64,-1313.47,-1313.47 0|0:281:255,0,11,0,15:255:9998:0,11,0,15:0,436,0,560:0,-76.7626,-898.956,-40.8673,-863.071,-859.759,-76.7626,-898.956,-863.071,-898.956,-30.9402,-853.122,-817.236,-853.122,-848.606 0|0:324:289,10,23,0,2:289:11274:10,23,0,2:404,910,0,82:0,-53.6894,-977.373,-12.1152,-905.494,-931.877,-86.9977,-980.383,-938.801,-1013.69,-80.2288,-973.615,-932.033,-1006.92,-1006.32 0|0:455:426,0,5,24,0:426:16588:0,5,24,0:0,204,977,0:0,-128.239,-1491.48,-111.407,-1474.65,-1473.15,-47.6452,-1410.89,-1394.06,-1403.66,-128.239,-1491.48,-1474.65,-1410.89,-1491.48 0|0:398:378,0,8,12,0:378:14812:0,8,12,0:0,323,487,0:0,-113.789,-1331.78,-87.1629,-1305.15,-1302.74,-73.6247,-1291.61,-1264.99,-1288,-113.789,-1331.78,-1305.15,-1291.61,-1331.78 dDocent_Contig_1019 1 . N G 952.387 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=27;CIGAR=1X;DP=27;DPB=27;DPRA=0;EPP=61.6401;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=46;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1063;QR=0;RO=0;RPL=0;RPP=61.6401;RPPR=0;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:81:-7.18985,-0.60206,0 1/1:6:0,6:0:0:6:217:-19.3954,-1.80618,0 1/1:4:0,4:0:0:4:161:-14.1687,-1.20412,0 1/1:8:0,8:0:0:8:322:-28.5911,-2.40824,0 1/1:5:0,5:0:0:5:203:-17.8092,-1.50515,0 1/1:2:0,2:0:0:2:79:-7.2992,-0.60206,0 dDocent_Contig_1020 96 . G A 251.064 . AB=0.47619;ABP=3.1137;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=186;DPB=186;DPRA=1.04918;EPP=26.8965;EPPR=383.018;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.594286;PAO=0;PQA=0;PQR=0;PRO=0;QA=384;QR=5899;RO=175;RPL=11;RPP=26.8965;RPPR=383.018;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=175;SRP=383.018;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:785:0:0:0,-6.92369,-70.9666 0/0:29:29,0:29:993:0:0:0,-8.72987,-89.6804 0/1:21:11,10:11:373:10:349:-25.4252,0,-27.5757 0/0:43:43,0:43:1449:0:0:0,-12.9443,-130.704 0/0:27:27,0:27:915:0:0:0,-8.12781,-82.6608 0/0:43:42,1:42:1384:1:35:0,-9.44566,-121.353 dDocent_Contig_1021 114 . C G 139.009 . AB=0.185185;ABP=49.4959;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=213;DPB=213;DPRA=1.69811;EPP=24.725;EPPR=443.819;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.9;PAIREDR=0.73399;PAO=0;PQA=0;PQR=0;PRO=0;QA=335;QR=6724;RO=203;RPL=0;RPP=24.725;RPPR=443.819;RPR=10;RUN=1;SAF=0;SAP=24.725;SAR=10;SRF=0;SRP=443.819;SRR=203;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1145:0:0:0,-10.536,-103.343 0/1:54:44,10:44:1428:10:335:-14.2197,0,-112.547 0/0:33:33,0:33:1055:0:0:0,-9.93399,-95.2363 0/0:34:34,0:34:1169:0:0:0,-10.235,-105.516 0/0:28:28,0:28:937:0:0:0,-8.42884,-84.6356 0/0:29:29,0:29:990:0:0:0,-8.72987,-89.41 dDocent_Contig_1022 125 . A C 114.627 . AB=0.145455;ABP=63.0614;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=163;DPB=163;DPRA=1.01852;EPP=20.3821;EPPR=339.589;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.25;PAIREDR=0.683871;PAO=0;PQA=0;PQR=0;PRO=0;QA=312;QR=6134;RO=155;RPL=8;RPP=20.3821;RPPR=339.589;RPR=0;RUN=1;SAF=0;SAP=20.3821;SAR=8;SRF=0;SRP=339.589;SRR=155;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:692:0:0:0,-5.11751,-62.6084 0/0:36:36,0:36:1409:0:0:0,-10.8371,-127.05 0/0:21:21,0:21:836:0:0:0,-6.32163,-75.5495 0/0:34:34,0:34:1360:0:0:0,-10.235,-122.658 0/1:26:21,5:21:811:5:196:-10.1855,0,-65.4664 0/1:29:26,3:26:1026:3:116:-2.08712,0,-83.8994 dDocent_Contig_1023 11 . G A 123.021 . AB=0.15;ABP=66.8516;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=289;DPB=289;DPRA=1.38012;EPP=24.725;EPPR=608.851;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.2;PAIREDR=0.516129;PAO=0;PQA=0;PQR=0;PRO=0;QA=376;QR=10497;RO=279;RPL=0;RPP=24.725;RPPR=608.851;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=279;SRP=608.851;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1057:0:0:0,-8.42884,-95.4296 0/0:58:58,0:58:2155:0:0:0,-17.4597,-194.183 0/0:43:43,0:43:1624:0:0:0,-12.9443,-146.429 0/0:42:42,0:42:1562:0:0:0,-12.6433,-140.854 0/1:60:51,9:51:1924:9:337:-12.6209,0,-155.346 0/0:58:57,1:57:2175:1:39:0,-13.5632,-192.078 dDocent_Contig_1024 19 . T C 47644.8 . AB=0.496248;ABP=3.40141;AC=6;AF=0.5;AN=12;AO=1587;CIGAR=1X;DP=3198;DPB=3198;DPRA=0;EPP=3449.14;EPPR=3431.77;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=0.99874;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=63635;QR=62047;RO=1579;RPL=0;RPP=3449.14;RPPR=3431.77;RPR=1587;RUN=1;SAF=1587;SAP=3449.14;SAR=0;SRF=1579;SRP=3431.77;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:279:141,138:141:5472:138:5497:-410.556,0,-408.372 0/1:423:224,178:224:8887:178:7107:-517.894,0,-677.964 0/1:297:206,90:206:8077:90:3614:-235.757,0,-637.052 0/1:442:254,178:254:9967:178:7179:-515.288,0,-766.046 0/1:905:473,432:473:18576:432:17253:-1278.91,0,-1398.06 0/1:852:281,571:281:11068:571:22985:-1810.07,0,-739.013 dDocent_Contig_1025 15 . A G 48.955 . AB=0.0888889;ABP=333.315;AC=1;AF=0.0833333;AN=12;AO=37;CIGAR=1X;DP=1140;DPB=1140;DPRA=1.29245;EPP=83.3548;EPPR=2393.8;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1455;QR=43671;RO=1101;RPL=0;RPP=83.3548;RPPR=2393.8;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=1101;SRP=2393.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:170:164,6:164:6416:6:242:0,-29.0181,-555.051 0/0:197:189,8:189:7539:8:284:0,-33.4131,-652.237 0/0:230:227,3:227:8963:3:122:0,-57.8644,-794.794 0/1:225:205,20:205:8203:20:807:-5.21425,0,-670.087 0/0:151:149,0:149:5909:0:0:0,-44.8535,-531.203 0/0:167:167,0:167:6641:0:0:0,-50.272,-597.415 dDocent_Contig_1026 1 . N G 135.078 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=45;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=141;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:74:-6.89824,-0.60206,0 1/1:2:0,2:0:0:2:67:-6.29148,-0.60206,0 dDocent_Contig_1027 8 . G A 226.462 . AB=0.0373832;ABP=400.816;AC=0;AF=0;AN=12;AO=90;CIGAR=1X3M2X;DP=1806;DPB=1806;DPRA=0;EPP=198.443;EPPR=3418.74;GTI=0;LEN=1;MEANALT=3.66667;MQM=26.5;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.994278;PAO=0;PQA=0;PQR=0;PRO=0;QA=3388;QR=57279;RO=1573;RPL=0;RPP=198.443;RPPR=3418.74;RPR=90;RUN=1;SAF=90;SAP=198.443;SAR=0;SRF=1573;SRP=3418.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:214:172,8,33:172:6194:8,33:311,1165:-22.6639,-58.4014,-561.429,0,-489.444,-495.549 0|0:263:246,8,9:246:9053:8,9:302,327:0,-57.8083,-795.693,-52.9075,-776.976,-790.525 0|0:292:252,10,25:252:9158:10,25:381,913:0,-54.8767,-799.785,-13.9027,-740.848,-754.314 0|0:268:224,18,22:224:8091:18,22:674,805:0,-30.8075,-685.802,-17.6915,-641.49,-671.499 0|0:412:366,24,20:366:13352:24,20:883,742:0,-60.7464,-1144.37,-60.5567,-1102,-1145.43 0|0:357:313,22,19:313:11431:22,19:837,695:0,-49.1182,-976.522,-49.4777,-938.413,-977.813 dDocent_Contig_1028 18 . T C 39.941 . AB=0.111111;ABP=50.3001;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=222;DPB=222;DPRA=1.43956;EPP=18.2106;EPPR=469.877;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.285714;PAIREDR=0.497674;PAO=0;PQA=0;PQR=0;PRO=0;QA=286;QR=8629;RO=215;RPL=0;RPP=18.2106;RPPR=469.877;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=215;SRP=469.877;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1399:0:0:0,-10.536,-126.165 0/0:50:49,1:49:1965:1:40:0,-11.0558,-173.051 0/0:45:43,2:43:1729:2:82:0,-5.76667,-148.044 0/1:36:32,4:32:1281:4:164:-4.31282,0,-104.717 0/0:26:26,0:26:1047:0:0:0,-7.82678,-94.5174 0/0:30:30,0:30:1208:0:0:0,-9.0309,-108.994 dDocent_Contig_1029 28 . C T 1216.51 . AB=0.191824;ABP=265.335;AC=4;AF=0.333333;AN=12;AO=63;CIGAR=1X;DP=477;DPB=477;DPRA=0.896552;EPP=139.813;EPPR=902;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.904762;PAIREDR=0.86715;PAO=0;PQA=0;PQR=0;PRO=0;QA=2507;QR=16608;RO=414;RPL=0;RPP=139.813;RPPR=902;RPR=63;RUN=1;SAF=63;SAP=139.813;SAR=0;SRF=414;SRP=902;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:56:48,8:48:1921:8:326:-12.8522,0,-156.235 0/1:97:70,27:70:2817:27:1062:-66.6724,0,-224.43 0/0:72:70,2:70:2835:2:80:0,-14.0826,-247.649 0/1:63:46,17:46:1850:17:676:-42.2007,0,-147.739 0/0:87:87,0:87:3507:0:0:0,-26.1896,-315.654 0/1:102:93,9:93:3678:9:363:-2.32923,0,-300.329 dDocent_Contig_1030 17 . A T 145.462 . AB=0.151515;ABP=72.629;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=393;DPB=393;DPRA=1.04651;EPP=33.4109;EPPR=825.998;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.214286;PAIREDR=0.580475;PAO=0;PQA=0;PQR=0;PRO=0;QA=519;QR=15079;RO=379;RPL=0;RPP=33.4109;RPPR=825.998;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=379;SRP=825.998;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:48,0:48:1895:0:0:0,-14.4494,-170.748 0/0:77:77,0:77:3081:0:0:0,-23.1793,-277.368 0/0:47:47,0:47:1870:0:0:0,-14.1484,-168.494 0/0:86:86,0:86:3392:0:0:0,-25.8886,-305.344 0/0:69:65,4:65:2604:4:137:0,-8.10753,-221.823 0/1:66:56,10:56:2237:10:382:-14.865,0,-181.628 dDocent_Contig_1031 11 . A T 714.725 . AB=0.329412;ABP=24.4951;AC=2;AF=0.166667;AN=12;AO=30;CIGAR=1X;DP=237;DPB=237;DPRA=0.991597;EPP=68.1545;EPPR=450.334;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.833333;PAIREDR=0.970874;PAO=0;PQA=0;PQR=0;PRO=0;QA=1160;QR=8033;RO=206;RPL=0;RPP=68.1545;RPPR=450.334;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=206;SRP=450.334;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:32,0:32:1252:0:0:0,-9.63296,-112.961 0/0:42:42,0:42:1614:0:0:0,-12.6433,-145.518 0/0:45:45,0:45:1753:0:0:0,-13.5463,-158.011 0/0:33:30,2:30:1182:2:80:0,-2.39451,-99.0941 0/1:36:24,12:24:939:12:444:-29.4619,0,-73.9785 0/1:49:33,16:33:1293:16:636:-42.8242,0,-101.898 dDocent_Contig_1032 38 . G C 10291.4 . AB=0.349586;ABP=216.62;AC=6;AF=0.5;AN=12;AO=380;CIGAR=1X;DP=1087;DPB=1087;DPRA=0;EPP=828.17;EPPR=1538.24;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=15106;QR=27913;RO=707;RPL=0;RPP=828.17;RPPR=1538.24;RPR=380;RUN=1;SAF=380;SAP=828.17;SAR=0;SRF=707;SRP=1538.24;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:108:20,88:20:804:88:3476:-280.369,0,-40.1666 0/1:223:124,99:124:4920:99:3934:-286.914,0,-375.57 0/1:173:107,66:107:4268:66:2646:-186.181,0,-331.992 0/1:219:159,60:159:6331:60:2380:-148.426,0,-503.596 0/1:209:172,37:172:6751:37:1457:-68.4652,0,-544.395 0/1:155:125,30:125:4839:30:1213:-62.7833,0,-388.759 dDocent_Contig_1033 1 . N G 1113.12 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=46;CIGAR=1X;DP=46;DPB=46;DPRA=0;EPP=102.898;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=28.1739;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.608696;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1737;QR=0;RO=0;RPL=0;RPP=102.898;RPPR=0;RPR=46;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:5:0,5:0:0:5:185:-16.2087,-1.50515,0 1/1:12:0,12:0:0:12:466:-34.6512,-3.61236,0 1/1:4:0,4:0:0:4:153:-10.4878,-1.20412,0 1/1:12:0,12:0:0:12:447:-21.9096,-3.61236,0 1/1:3:0,3:0:0:3:106:-7.94668,-0.90309,0 1/1:10:0,10:0:0:10:380:-19.3275,-3.0103,0 dDocent_Contig_1034 10 . G A 74.2423 . AB=0.125;ABP=71.4117;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=338;DPB=338;DPRA=0.992908;EPP=18.2106;EPPR=721.768;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.428571;PAIREDR=0.691843;PAO=0;PQA=0;PQR=0;PRO=0;QA=266;QR=13167;RO=331;RPL=0;RPP=18.2106;RPPR=721.768;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=331;SRP=721.768;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:56:49,7:49:1944:7:266:-7.44195,0,-158.294 0/0:64:64,0:64:2536:0:0:0,-19.2659,-228.37 0/0:48:48,0:48:1922:0:0:0,-14.4494,-173.177 0/0:63:63,0:63:2494:0:0:0,-18.9649,-224.606 0/0:47:47,0:47:1884:0:0:0,-14.1484,-169.761 0/0:60:60,0:60:2387:0:0:0,-18.0618,-214.981 dDocent_Contig_1035 22 . C T 1543.5 . AB=0.160069;ABP=586.15;AC=6;AF=0.5;AN=12;AO=93;CIGAR=1X;DP=581;DPB=581;DPRA=0;EPP=204.957;EPPR=1047.51;GTI=0;LEN=1;MEANALT=1.33333;MQM=59.1935;MQMR=59.0021;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0537634;PAIREDR=0.529897;PAO=0;PQA=0;PQR=0;PRO=0;QA=3681;QR=18986;RO=485;RPL=0;RPP=204.957;RPPR=1056.17;RPR=93;RUN=1;SAF=93;SAP=204.957;SAR=0;SRF=484;SRP=1047.51;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:43,11:43:1701:11:441:-23.6843,0,-136.895 0/1:134:115,19:115:4485:19:765:-28.6467,0,-363.216 0/1:63:50,13:50:1964:13:523:-28.3492,0,-156.797 0/1:152:123,27:123:4733:27:1076:-51.5709,0,-380.316 0/1:87:77,10:77:3062:10:393:-9.50986,0,-244.876 0/1:91:77,13:77:3041:13:483:-16.5859,0,-241.831 dDocent_Contig_1036 24 . A T 120.581 . AB=0.193548;ABP=28.2974;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=154;DPB=154;DPRA=1.14286;EPP=20.3821;EPPR=320.045;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.1096;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.575342;PAO=0;PQA=0;PQR=0;PRO=0;QA=313;QR=5780;RO=146;RPL=0;RPP=20.3821;RPPR=320.045;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=146;SRP=320.045;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:837:0:0:0,-6.32163,-75.4132 0/0:29:29,0:29:1153:0:0:0,-8.72987,-103.948 0/0:20:20,0:20:785:0:0:0,-6.0206,-70.7939 0/0:28:28,0:28:1113:0:0:0,-8.42884,-100.252 0/0:25:23,2:23:905:2:76:0,-0.311076,-74.5374 0/1:31:25,6:25:987:6:237:-12.3712,0,-79.7882 dDocent_Contig_1037 11 . G A 244.92 . AB=0.178082;ABP=68.7196;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=713;DPB=713;DPRA=0.570312;EPP=31.2394;EPPR=1523.04;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.992857;PAO=0;PQA=0;PQR=0;PRO=0;QA=516;QR=27569;RO=700;RPL=0;RPP=31.2394;RPPR=1523.04;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=700;SRP=1523.04;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:84:84,0:84:3303:0:0:0,-25.2865,-297.347 0/0:94:94,0:94:3678:0:0:0,-28.2968,-331.044 0/0:79:79,0:79:3161:0:0:0,-23.7814,-284.561 0/1:73:60,13:60:2334:13:516:-24.8108,0,-188.251 0/0:218:218,0:218:8554:0:0:0,-65.6245,-769.404 0/0:165:165,0:165:6539:0:0:0,-49.6699,-588.239 dDocent_Contig_1038 46 . T C 2120.26 . AB=0.234694;ABP=242.67;AC=6;AF=0.5;AN=12;AO=92;CIGAR=1X;DP=392;DPB=392;DPRA=0;EPP=202.786;EPPR=645.795;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3689;QR=11942;RO=300;RPL=0;RPP=202.786;RPPR=645.795;RPR=92;RUN=1;SAF=92;SAP=202.786;SAR=0;SRF=300;SRP=654.452;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:28,3:28:1117:3:122:-2.04056,0,-91.482 0/1:55:49,6:49:1917:6:241:-5.50982,0,-156.179 0/1:103:80,23:80:3198:23:930:-52.9973,0,-256.888 0/1:40:36,4:36:1440:4:153:-2.09851,0,-117.81 0/1:86:47,39:47:1860:39:1563:-115.019,0,-141.725 0/1:77:60,17:60:2410:17:680:-38.3502,0,-193.867 dDocent_Contig_1039 32 . G A 219.477 . AB=0.117021;ABP=242.519;AC=1;AF=0.0833333;AN=12;AO=54;CIGAR=1X;DP=3552;DPB=3552;DPRA=3.13934;EPP=120.27;EPPR=7592.31;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.999428;PAO=0;PQA=0;PQR=0;PRO=0;QA=2123;QR=139161;RO=3495;RPL=0;RPP=120.27;RPPR=7592.31;RPR=54;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=3495;SRP=7592.31;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:230:230,0:230:9106:0:0:0,-69.2369,-819.029 0/0:364:351,13:351:13999:13:521:0,-62.3387,-1211.63 0/1:188:165,22:165:6584:22:874:-22.2664,0,-535.569 0/0:258:258,0:258:10266:0:0:0,-77.6657,-923.297 0/0:1204:1186,16:1186:47207:16:612:0,-306.812,-4188.79 0/0:1308:1305,3:1305:51999:3:116:0,-382.932,-4664.11 dDocent_Contig_1040 16 . T G 60835.6 . AB=0.259402;ABP=1045.82;AC=5;AF=0.416667;AN=12;AO=538;CIGAR=1M1D2M1X2M;DP=2074;DPB=1793.29;DPRA=0;EPP=1171.26;EPPR=237.529;GTI=0;LEN=1;MEANALT=2.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=21437;QR=4235;RO=108;RPL=0;RPP=1171.26;RPPR=237.529;RPR=538;RUN=1;SAF=538;SAP=1171.26;SAR=0;SRF=108;SRP=237.529;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:190:20,28,142:20:756:28,142:1118,5551:-480.435,-394.376,-447.906,-30.1394,0,-49.3448 0|0:252:51,17,184:51:2003:17,184:683,7283:-584.003,-543.073,-702.687,0,-108.441,-109.336 1|0:139:12,36,89:12:480:36,89:1435,3448:-358.22,-243.663,-272.367,-78.6262,0,-91.3753 1|0:274:17,73,184:17:681:73,184:2896,7186:-767.803,-534.543,-568.673,-182.267,0,-182.983 1|0:711:6,226,477:6:241:226,477:8982,18673:-2252.96,-1515.31,-1467.14,-719.59,0,-595.858 1|0:508:2,158,347:2:74:158,347:6323,13730:-1644.14,-1123.88,-1082.37,-514.853,0,-416.448 dDocent_Contig_1041 1 . N G 731.008 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=21;CIGAR=1X;DP=21;DPB=21;DPRA=0;EPP=48.6112;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=50.0952;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0.619048;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=836;QR=0;RO=0;RPL=0;RPP=48.6112;RPPR=0;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:6:0,6:0:0:6:236:-19.3243,-1.80618,0 1/1:4:0,4:0:0:4:164:-14.1507,-1.20412,0 ./.:.:.:.:.:.:.:. 1/1:9:0,9:0:0:9:354:-30.7229,-2.70927,0 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 dDocent_Contig_1042 21 . C T 1803.91 . AB=0.331707;ABP=53.4414;AC=6;AF=0.5;AN=12;AO=68;CIGAR=1X;DP=205;DPB=205;DPRA=0;EPP=150.67;EPPR=300.502;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0.759124;PAO=0;PQA=0;PQR=0;PRO=0;QA=2711;QR=5396;RO=137;RPL=0;RPP=150.67;RPPR=300.502;RPR=68;RUN=1;SAF=68;SAP=150.67;SAR=0;SRF=137;SRP=300.502;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:18,15:18:706:15:602:-44.5849,0,-53.9256 0/1:54:37,17:37:1478:17:666:-44.0126,0,-117.013 0/1:22:11,11:11:439:11:446:-33.8733,0,-33.2424 0/1:38:26,12:26:1027:12:482:-32.2917,0,-81.2796 0/1:21:14,7:14:550:7:269:-18.2438,0,-43.5133 0/1:37:31,6:31:1196:6:246:-11.382,0,-96.7733 dDocent_Contig_1043 19 . T G 269.792 . AB=0.166667;ABP=89.8692;AC=3;AF=0.25;AN=12;AO=19;CIGAR=1X;DP=198;DPB=198;DPRA=1.85714;EPP=44.2683;EPPR=391.704;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.96648;PAO=0;PQA=0;PQR=0;PRO=0;QA=770;QR=7146;RO=179;RPL=0;RPP=44.2683;RPPR=391.704;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=179;SRP=391.704;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:401:0:0:0,-3.0103,-36.4477 0/1:27:24,3:24:936:3:118:-2.87491,0,-76.4042 0/1:24:20,4:20:804:4:163:-7.83371,0,-65.4524 0/0:32:32,0:32:1255:0:0:0,-9.63296,-113.218 0/0:66:62,4:62:2502:4:164:0,-4.71808,-210.16 0/1:39:31,8:31:1248:8:325:-17.8795,0,-100.848 dDocent_Contig_1045 35 . T A 8768.04 . AB=0.359909;ABP=152.679;AC=2;AF=0.166667;AN=12;AO=320;CIGAR=1X;DP=2579;DPB=2579;DPRA=1.14025;EPP=697.881;EPPR=4908.37;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9951;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=12845;QR=90484;RO=2259;RPL=0;RPP=697.881;RPPR=4908.37;RPR=320;RUN=1;SAF=320;SAP=697.881;SAR=0;SRF=2259;SRP=4908.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:433:433,0:433:17364:0:0:0,-130.346,-1561.31 0/0:496:492,4:492:19658:4:151:0,-135.355,-1753.6 0/0:414:414,0:414:16565:0:0:0,-124.626,-1489.47 0/0:358:358,0:358:14316:0:0:0,-107.769,-1287.33 0/1:403:301,102:301:12085:102:4095:-247.207,0,-965.432 0/1:475:261,214:261:10496:214:8599:-630.411,0,-800.905 dDocent_Contig_1046 90 . G T 168.603 . AB=0.264706;ABP=19.3602;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=444;DPB=444;DPRA=0.414634;EPP=22.5536;EPPR=945.429;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=301;QR=14876;RO=434;RPL=9;RPP=22.5536;RPPR=945.429;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=434;SRP=945.429;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:60:60,0:60:2033:0:0:0,-18.0618,-183.244 0/0:108:107,0:107:3683:0:0:0,-32.2102,-331.621 0/0:59:59,0:59:2009:0:0:0,-17.7608,-181.083 0/0:109:109,0:109:3731:0:0:0,-32.8123,-336.01 0/0:74:74,0:74:2558:0:0:0,-22.2762,-230.481 0/1:34:25,9:25:862:9:301:-17.1791,0,-67.6617 dDocent_Contig_1047 21 . C A 164.19 . AB=0.113095;ABP=221.45;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1X;DP=1067;DPB=1067;DPRA=0.934372;EPP=44.2683;EPPR=2276.54;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=741;QR=41085;RO=1047;RPL=0;RPP=44.2683;RPPR=2276.54;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=1047;SRP=2276.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:168:149,19:149:5847:19:741:-16.4367,0,-475.498 0/0:167:166,0:166:6508:0:0:0,-49.971,-585.088 0/0:124:124,0:124:4893:0:0:0,-37.3277,-440.282 0/0:113:113,0:113:4464:0:0:0,-34.0164,-401.728 0/0:246:246,0:246:9695:0:0:0,-74.0534,-872.006 0/0:249:249,0:249:9678:0:0:0,-74.9565,-870.516 dDocent_Contig_1048 96 . C A 10374.1 . AB=0.209195;ABP=2239.69;AC=4;AF=0.333333;AN=12;AO=732;CIGAR=1X;DP=4708;DPB=4708;DPRA=0;EPP=1592.53;EPPR=8499.98;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=24954;QR=134023;RO=3913;RPL=732;RPP=1592.53;RPPR=8499.98;RPR=0;RUN=1;SAF=732;SAP=1592.53;SAR=0;SRF=3913;SRP=8499.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:591:419,172:419:14331:172:5881:-351.534,0,-1111.76 0/1:952:814,137:814:27934:137:4664:-133.319,0,-2226.86 0/1:722:583,138:583:19976:138:4698:-205.894,0,-1580.42 0/1:780:590,190:590:20265:190:6486:-349.068,0,-1588.72 0/0:916:858,28:858:29372:28:971:0,-179.354,-2555.15 0/0:747:649,67:649:22145:67:2254:0,-12.7475,-1789.54 dDocent_Contig_1049 10 . A G 117617 . AB=0.271482;ABP=1095.69;AC=8;AF=0.666667;AN=12;AO=3559;CIGAR=1X;DP=5377;DPB=5377;DPRA=0;EPP=7731.28;EPPR=3946.4;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=141347;QR=71462;RO=1816;RPL=0;RPP=7731.28;RPPR=3946.4;RPR=3559;RUN=1;SAF=3559;SAP=7731.28;SAR=0;SRF=1816;SRP=3946.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:414:266,148:266:10394:148:5874:-403.837,0,-810.257 0/1:866:587,278:587:23091:278:11044:-732.726,0,-1815.87 0/1:524:402,122:402:16009:122:4877:-281.08,0,-1281.84 0/1:605:499,106:499:19530:106:4225:-198.088,0,-1574.13 1/1:1590:0,1589:0:0:1589:63165:-5678.34,-478.337,0 1/1:1378:62,1316:62:2438:1316:52162:-4470.07,-195.243,0 dDocent_Contig_1050 7 . T C 119.384 . AB=0.0755556;ABP=355.088;AC=1;AF=0.0833333;AN=12;AO=31;CIGAR=1X1M1X;DP=566;DPB=566;DPRA=2.00442;EPP=70.3259;EPPR=1088.75;GTI=0;LEN=1;MEANALT=2.75;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1174;QR=18954;RO=500;RPL=0;RPP=70.3259;RPPR=1088.75;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=500;SRP=1088.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:162:140,11,10:140:5292:11,10:417,378:0,-7.9491,-438.428,-11.1588,-410.756,-441.938 0|0:114:95,7,12:95:3600:7,12:259,467:-9.79535,-17.2113,-310.258,0,-273.983,-291.559 0|0:66:61,3,0:61:2326:3,0:117,0:0,-8.7452,-198.648,-18.3628,-199.551,-209.17 0|1:111:94,10,6:94:3560:10,6:381,229:-2.95619,0,-288.843,-12.4649,-273.065,-302.513 0|0:23:23,0,0:23:870:0,0:0,0:0,-6.92369,-78.6184,-6.92369,-78.6184,-78.6184 0|0:90:87,0,0:87:3306:0,0:0,0:0,-26.1896,-297.325,-26.1896,-297.325,-297.325 dDocent_Contig_1051 14 . G A 7857.14 . AB=0.188811;ABP=1807.23;AC=3;AF=0.25;AN=12;AO=456;CIGAR=1X;DP=3807;DPB=3807;DPRA=0;EPP=993.202;EPPR=7279.61;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=17952;QR=133305;RO=3351;RPL=0;RPP=993.202;RPPR=7279.61;RPR=456;RUN=1;SAF=456;SAP=993.202;SAR=0;SRF=3351;SRP=7279.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:470:469,1:469:18667:1:40:0,-137.488,-1674.5 0/0:645:610,35:610:24261:35:1393:0,-68.5321,-2055.75 0/0:547:532,15:532:21241:15:593:0,-110.955,-1856.15 0/1:587:509,78:509:20288:78:3069:-99.6069,0,-1647.5 0/1:828:621,207:621:24627:207:8118:-481.013,0,-1965.06 0/1:730:610,120:610:24221:120:4739:-206.704,0,-1958.02 dDocent_Contig_1052 1 . N G 74.1981 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.21888;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=78;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:78:-7.40278,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1053 12 . A G 22570.7 . AB=0.746849;ABP=506.874;AC=6;AF=0.5;AN=12;AO=711;CIGAR=1X;DP=952;DPB=952;DPRA=0;EPP=1546.93;EPPR=519.821;GTI=0;LEN=1;MEANALT=1.16667;MQM=58.557;MQMR=57.6933;NS=6;NUMALT=1;ODDS=0;PAIRED=0.54571;PAIREDR=0.739496;PAO=0;PQA=0;PQR=0;PRO=0;QA=28440;QR=9466;RO=238;RPL=0;RPP=1546.93;RPPR=519.821;RPR=711;RUN=1;SAF=711;SAP=1546.93;SAR=0;SRF=238;SRP=519.821;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:111:22,89:22:871:89:3506:-280.719,0,-45.0733 0/1:213:39,171:39:1551:171:6853:-548.912,0,-74.5646 0/1:134:30,104:30:1197:104:4220:-337.791,0,-67.405 0/1:176:50,126:50:1995:126:5038:-399.206,0,-126.368 0/1:156:44,112:44:1762:112:4480:-354.345,0,-108.984 0/1:162:53,109:53:2090:109:4343:-340.097,0,-134.633 dDocent_Contig_1055 14 . G A 124.098 . AB=0.117117;ABP=144.352;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=279;DPB=279;DPRA=1.22222;EPP=39.9253;EPPR=204.709;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=50.6527;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.647059;PAIREDR=0.492366;PAO=0;PQA=0;PQR=0;PRO=0;QA=669;QR=10371;RO=262;RPL=0;RPP=39.9253;RPPR=571.936;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=209;SRP=204.709;SRR=53;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:44,0:44:1727:0:0:0,-13.2453,-136.268 0/1:72:64,8:64:2563:8:306:-6.21952,0,-187.149 0/0:51:49,2:49:1949:2:78:0,-7.94923,-129.902 0/1:39:34,5:34:1325:5:204:-7.00386,0,-93.7634 0/0:37:37,0:37:1465:0:0:0,-11.1381,-115.865 0/0:36:34,2:34:1342:2:81:0,-3.15135,-106.68 dDocent_Contig_1056 10 . C A 576.893 . AB=0.0895522;ABP=101.051;AC=0;AF=0;AN=12;AO=6;CIGAR=1X1M1X2M1X;DP=180;DPB=180;DPRA=1.08065;EPP=16.0391;EPPR=293.988;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=216;QR=5245;RO=134;RPL=0;RPP=16.0391;RPPR=293.988;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=134;SRP=293.988;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:22:20,0,2,0:20:776:0,2,0:0,80,0:-0.969131,-6.98973,-70.733,0,-64.1418,-63.5397,-6.98973,-70.733,-64.1418,-70.733 0|0:45:35,2,8,0:35:1369:2,8,0:65,307,0:-14.7077,-20.0116,-131.969,0,-107.375,-110.207,-25.2438,-132.571,-112.615,-137.812 0|0:31:31,0,0,0:31:1206:0,0,0:0,0,0:0,-9.33193,-108.823,-9.33193,-108.823,-108.823,-9.33193,-108.823,-108.823,-108.823 0|0:22:12,4,4,0:12:471:4,4,0:151,160,0:-9.59369,-0.819561,-38.3803,0,-26.3982,-37.5707,-13.2061,-39.5844,-38.7748,-51.9598 0|0:40:30,0,6,4:30:1189:0,6,4:0,240,161:-10.7375,-19.7684,-117.634,0,-97.864,-96.0579,-6.4987,-104.365,-84.5946,-103.161 0|0:20:6,0,7,7:6:234:0,7,7:0,279,278:-24.8267,-26.6328,-45.8644,-3.65593,-22.8866,-20.7794,-3.75074,-22.9807,0,-20.8735 dDocent_Contig_1058 29 . T A 70361.5 . AB=0.8;ABP=2152.77;AC=6;AF=0.5;AN=12;AO=2200;CIGAR=1X;DP=2750;DPB=2750;DPRA=0;EPP=4780.25;EPPR=1190.81;GTI=0;LEN=1;MEANALT=1.5;MQM=59.9418;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=87531;QR=21946;RO=547;RPL=0;RPP=4780.25;RPPR=1190.81;RPR=2200;RUN=1;SAF=2200;SAP=4780.25;SAR=0;SRF=547;SRP=1190.81;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:291:68,221:68:2729:221:8733:-697.897,0,-158.314 0/1:391:103,288:103:4144:288:11407:-908.165,0,-255.206 0/1:264:78,186:78:3157:186:7448:-588.926,0,-204.713 0/1:382:104,278:104:4150:278:11067:-880.1,0,-258.464 0/1:801:83,717:83:3339:717:28602:-2329.01,0,-59.6234 0/1:621:111,510:111:4427:510:20274:-1636.05,0,-211.421 dDocent_Contig_1059 37 . C T 91.0917 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=11;CIGAR=1X3M1X;DP=427;DPB=427;DPRA=1.15447;EPP=26.8965;EPPR=862.913;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.853535;PAO=0;PQA=0;PQR=0;PRO=0;QA=437;QR=15583;RO=396;RPL=0;RPP=26.8965;RPPR=862.913;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=396;SRP=862.913;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:65:62,1,0:62:2428:1,0:39,0:0,-15.4113,-214.886,-18.6639,-215.187,-218.393 0|0:66:65,0,1:65:2568:0,1:0,39:0,-19.5669,-230.872,-15.9714,-227.666,-227.365 0|0:82:70,6,4:70:2727:6,4:238,160:0,-1.48253,-223.769,-7.89202,-212.395,-230.783 0|0:57:57,0,0:57:2261:0,0:0,0:0,-17.1587,-203.671,-17.1587,-203.671,-203.671 0|0:66:62,4,0:62:2436:4,0:160,0:0,-5.08397,-204.617,-18.6639,-205.821,-219.002 0|0:91:80,0,10:80:3163:0,10:0,403:-9.42755,-33.5099,-293.816,0,-260.598,-257.587 dDocent_Contig_1060 39 . A T 10859.3 . AB=0.186253;ABP=388.622;AC=2;AF=0.166667;AN=12;AO=84;CIGAR=1X3M1X;DP=584;DPB=584;DPRA=0;EPP=185.414;EPPR=307.016;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3172;QR=5165;RO=140;RPL=0;RPP=185.414;RPPR=307.016;RPR=84;RUN=1;SAF=84;SAP=185.414;SAR=0;SRF=140;SRP=307.016;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:73:19,24,29,0:19:695:24,29,0:902,1151,0:-106.167,-37.9939,-87.5516,-17.119,0,-65.1803,-111.886,-94.7763,-73.9101,-168.672 1|0:106:24,23,56,3:24:882:23,56,3:883,2199,122:-174.009,-108.755,-173.929,-0.391128,0,-55.6298,-171.17,-170.789,-62.4224,-242.367 0|0:179:45,33,99,2:45:1668:33,99,2:1232,3951,80:-311.859,-224.549,-351.078,0,-35.6061,-106.668,-318.815,-354.422,-129.879,-454.679 0|0:93:29,4,49,11:29:1074:4,49,11:155,1930,446:-150.021,-146.018,-232.665,0,-75.1056,-73.0898,-121.97,-197.088,-51.0527,-206.51 0|0:46:9,0,36,1:9:342:0,36,1:0,1427,41:-114.73,-117.44,-145.485,0,-28.0214,-17.1843,-114.055,-142.1,-24.6343,-141.799 0|0:87:14,0,73,0:14:504:0,73,0:0,2880,0:-233.109,-237.323,-278.434,0,-41.4764,-19.5012,-237.323,-278.434,-41.4764,-278.434 dDocent_Contig_1061 8 . G T 826.317 . AB=0.215789;ABP=136.316;AC=3;AF=0.25;AN=12;AO=45;CIGAR=1X;DP=370;DPB=370;DPRA=1.46809;EPP=100.727;EPPR=708.739;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.916923;PAO=0;PQA=0;PQR=0;PRO=0;QA=1716;QR=12410;RO=325;RPL=0;RPP=100.727;RPPR=708.739;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=325;SRP=708.739;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:37,0:37:1398:0:0:0,-11.1381,-126.097 0/0:57:57,0:57:2178:0:0:0,-17.1587,-196.241 0/1:50:44,6:44:1654:6:232:-6.19743,0,-134.073 0/1:54:46,8:46:1762:8:305:-11.5544,0,-142.581 0/0:86:82,4:82:3146:4:156:0,-11.4713,-268.873 0/1:86:59,27:59:2272:27:1023:-66.4893,0,-178.808 dDocent_Contig_1062 107 . N A 386.252 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=25;CIGAR=1X;DP=27;DPB=27;DPRA=0;EPP=57.2971;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=424;QR=0;RO=0;RPL=0;RPP=57.2971;RPPR=0;RPR=25;RUN=1;SAF=0;SAP=57.2971;SAR=25;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,3:0:0:3:65:-5.95979,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:23:0,22:0:0:22:359:-32.36,-6.62266,0 dDocent_Contig_1063 30 . C T 95.9537 . AB=0.113043;ABP=302.145;AC=2;AF=0.166667;AN=12;AO=47;CIGAR=1X;DP=633;DPB=633;DPRA=0;EPP=105.07;EPPR=1271.15;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994863;PAO=0;PQA=0;PQR=0;PRO=0;QA=1606;QR=23194;RO=584;RPL=0;RPP=105.07;RPPR=1271.15;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=584;SRP=1271.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:117:113,4:113:4489:4:121:0,-24.033,-392.758 0/1:203:182,21:182:7246:21:717:-3.73314,0,-590.677 0/0:91:86,5:86:3455:5:180:0,-10.8437,-294.436 0/0:176:163,11:163:6459:11:388:0,-17.5048,-545.77 0/0:19:18,1:18:689:1:39:0,-1.82301,-58.4257 0/1:27:22,5:22:856:5:161:-6.67559,0,-69.2138 dDocent_Contig_1064 8 . G A 6056.08 . AB=0.245567;ABP=637.273;AC=4;AF=0.333333;AN=12;AO=277;CIGAR=1X;DP=2003;DPB=2003;DPRA=0.644571;EPP=604.508;EPPR=3748.8;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10520;QR=65714;RO=1725;RPL=0;RPP=604.508;RPPR=3748.8;RPR=277;RUN=1;SAF=277;SAP=604.508;SAR=0;SRF=1725;SRP=3748.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:249:196,53:196:7487:53:2014:-106.543,0,-598.715 0/1:370:304,66:304:11559:66:2492:-113.107,0,-928.487 0/1:248:139,109:139:5278:109:4164:-300.187,0,-400.367 0/1:261:212,49:212:8036:49:1850:-88.1777,0,-644.488 0/0:411:410,0:410:15688:0:0:0,-123.422,-1410.78 0/0:464:464,0:464:17666:0:0:0,-139.678,-1589.07 dDocent_Contig_1065 77 . G T 195.971 . AB=0.25641;ABP=23.1103;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=206;DPB=206;DPRA=0.985507;EPP=26.8965;EPPR=426.447;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.636364;PAIREDR=0.533333;PAO=0;PQA=0;PQR=0;PRO=0;QA=355;QR=6540;RO=195;RPL=7;RPP=4.78696;RPPR=27.6092;RPR=4;RUN=1;SAF=7;SAP=4.78696;SAR=4;SRF=121;SRP=27.6092;SRR=74;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:28,1:28:944:1:7:0,-8.02987,-84.5683 0/0:41:41,0:41:1361:0:0:0,-12.3422,-122.781 0/1:39:29,10:29:951:10:348:-19.9159,0,-74.1488 0/0:38:38,0:38:1292:0:0:0,-11.4391,-116.579 0/0:20:20,0:20:675:0:0:0,-6.0206,-61.0656 0/0:39:39,0:39:1317:0:0:0,-11.7402,-118.825 dDocent_Contig_1066 57 . T A 12125.5 . AB=0.38296;ABP=141.267;AC=6;AF=0.5;AN=12;AO=445;CIGAR=1X;DP=1162;DPB=1162;DPRA=0;EPP=969.316;EPPR=1557.78;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=17398;QR=28392;RO=716;RPL=445;RPP=969.316;RPPR=1557.78;RPR=0;RUN=1;SAF=445;SAP=969.316;SAR=0;SRF=716;SRP=1557.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:122:92,30:92:3566:30:1152:-67.2274,0,-284.27 0/1:195:96,99:96:3840:99:3876:-290.151,0,-286.895 0/1:213:184,29:184:7331:29:1142:-38.9376,0,-595.322 0/1:180:99,81:99:3937:81:3178:-231.91,0,-300.14 0/1:194:129,64:129:5143:64:2505:-167.093,0,-404.242 0/1:258:116,142:116:4575:142:5545:-421.233,0,-334.011 dDocent_Contig_1067 20 . T C 445.968 . AB=0.100386;ABP=362.259;AC=2;AF=0.166667;AN=12;AO=56;CIGAR=1X2M;DP=978;DPB=978;DPRA=0;EPP=124.613;EPPR=1774.97;GTI=0;LEN=1;MEANALT=3.5;MQM=58.0893;MQMR=59.9745;NS=6;NUMALT=2;ODDS=1.11022e-16;PAIRED=0.285714;PAIREDR=0.61165;PAO=0;PQA=0;PQR=0;PRO=0;QA=2239;QR=32658;RO=824;RPL=0;RPP=124.613;RPPR=1792.3;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=822;SRP=1774.97;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:143:92,25,16:92:3630:25,16:973,629:-42.3509,0,-291.156,-18.3072,-246.959,-312.19 0|0:172:147,11,12:147:5819:11,12:426,488:0,-16.0148,-491.596,-4.183,-454.878,-479.53 0|1:116:97,6,10:97:3819:6,10:229,392:-3.0591,-15.0703,-327.441,0,-297.025,-311.204 0|0:175:152,15,5:152:6058:15,5:572,205:0,-3.87378,-498.246,-28.8203,-485.84,-526.23 0|0:222:201,14,7:201:7985:14,7:563,284:0,-14.1084,-667.163,-37.4334,-648.303,-692.594 0|0:150:135,7,6:135:5347:7,6:283,241:0,-17.3033,-455.269,-21.2322,-437.964,-459.491 dDocent_Contig_1068 12 . G A 13036.9 . AB=0.138996;ABP=4400.74;AC=4;AF=0.333333;AN=12;AO=562;CIGAR=1X3M2X;DP=5076;DPB=5076;DPRA=0;EPP=1223.38;EPPR=8547.75;GTI=0;LEN=1;MEANALT=4.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=4.44089e-16;PAIRED=0.951957;PAIREDR=0.998475;PAO=0;PQA=0;PQR=0;PRO=0;QA=21808;QR=154184;RO=3935;RPL=0;RPP=1223.38;RPPR=8547.75;RPR=562;RUN=1;SAF=562;SAP=1223.38;SAR=0;SRF=3935;SRP=8547.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:702:467,52,182:467:18220:52,182:2035,7268:-458.008,-431.268,-1913.21,0,-1330.28,-1442.81 0|1:929:649,160,116:649:25423:160,116:6190,4626:-313.057,0,-2042.24,-127.472,-1709.45,-2182.96 0|1:673:540,74,59:540:21140:74,59:2862,2381:-72.5022,0,-1715.84,-38.7767,-1541.84,-1759.14 0|1:687:521,99,65:521:20425:99,65:3860,2590:-160.433,0,-1649.77,-104.002,-1466.3,-1764.01 0|0:1191:1124,22,40:1124:44136:22,40:851,1600:0,-268.458,-3891.71,-206.552,-3766.54,-3824.4 0|1:894:634,155,99:634:24840:155,99:6010,3912:-302.889,0,-1995.83,-171.849,-1720.6,-2184.54 dDocent_Contig_1069 36 . C T 584.597 . AB=0.141176;ABP=383.248;AC=2;AF=0.166667;AN=12;AO=60;CIGAR=1X;DP=1220;DPB=1220;DPRA=0.710448;EPP=133.299;EPPR=2521.92;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999138;PAO=0;PQA=0;PQR=0;PRO=0;QA=2229;QR=46198;RO=1160;RPL=0;RPP=133.299;RPPR=2521.92;RPR=60;RUN=1;SAF=60;SAP=133.299;SAR=0;SRF=1160;SRP=2521.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:108:102,6:102:4003:6:201:0,-14.1011,-341.839 0/1:159:131,28:131:5237:28:1029:-45.0367,0,-423.313 0/1:181:161,20:161:6456:20:760:-14.2366,0,-526.271 0/0:149:144,5:144:5734:5:201:0,-26.3824,-497.393 0/0:268:268,0:268:10667:0:0:0,-80.676,-959.317 0/0:355:354,1:354:14101:1:38:0,-103.068,-1264.24 dDocent_Contig_1070 22 . T C 591.722 . AB=0.118143;ABP=603.345;AC=3;AF=0.25;AN=12;AO=69;CIGAR=1X;DP=1023;DPB=1023;DPRA=0.969143;EPP=152.842;EPPR=2074.59;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.884058;PAIREDR=0.984277;PAO=0;PQA=0;PQR=0;PRO=0;QA=2777;QR=38189;RO=954;RPL=0;RPP=152.842;RPPR=2074.59;RPR=69;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=954;SRP=2074.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:171:145,26:145:5841:26:1041:-42.5047,0,-473.99 0/1:203:185,18:185:7386:18:722:-4.19642,0,-603.247 0/1:100:88,12:88:3515:12:487:-14.0781,0,-286.272 0/0:149:137,12:137:5491:12:487:0,-0.671803,-449.829 0/0:175:175,0:175:7004:0:0:0,-52.6802,-630.028 0/0:225:224,1:224:8952:1:40:0,-63.7361,-801.15 dDocent_Contig_1071 31 . T A 118878 . AB=0.654118;ABP=792.144;AC=7;AF=0.583333;AN=12;AO=2993;CIGAR=1M1D7M1X8M;DP=4398;DPB=4175.5;DPRA=0;EPP=6502.23;EPPR=387.361;GTI=0;LEN=1;MEANALT=9.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.999332;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=112532;QR=6902;RO=177;RPL=0;RPP=6502.23;RPPR=387.361;RPR=2993;RUN=1;SAF=2993;SAP=6502.23;SAR=0;SRF=177;SRP=387.361;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:573:19,491,45:19:738:491,45:18486,1693:-1596,-87.1657,0,-1463.01,-9.10958,-1510.11 1|0:806:58,572,98:58:2244:572,98:21499,3689:-1861.56,-117.913,-130.043,-1576.79,0,-1731.6 1|0:693:45,503,143:45:1771:503,143:18799,5460:-1827.79,-302.233,-296.507,-1393.4,0,-1496.05 1|0:671:41,485,105:41:1603:485,105:18220,3950:-1671.88,-191.804,-177.596,-1360.63,0,-1460.81 1|0:863:0,553,290:0:0:553,290:20831,10843:-2594.47,-887.788,-721.318,-1706.7,0,-1619.4 1|0:792:14,389,382:14:546:389,382:14697,14444:-2339.26,-1139.01,-1066.79,-1159.6,0,-1089.49 dDocent_Contig_1072 46 . G A 41286.4 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=36;CIGAR=2X;DP=1589;DPB=1589;DPRA=0;EPP=81.1833;EPPR=201.373;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.951456;PAO=0;PQA=0;PQR=0;PRO=0;QA=1243;QR=3399;RO=103;RPL=0;RPP=81.1833;RPPR=193.278;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=102;SRP=218.07;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:353:21,9,323:21:689:9,323:309,10924:-920.83,-902.06,-955.021,-41.5725,-72.1374,0 0|0:478:25,8,445:25:823:8,445:272,15123:-1286.52,-1271.99,-1336.1,-67.4447,-111.892,0 0|0:271:21,2,248:21:686:2,248:64,8304:-685.381,-686.547,-741.344,-19.2494,-69.4996,0 0|0:301:18,8,275:18:595:8,275:276,9299:-783.068,-766.064,-811.77,-34.6779,-60.356,0 0|0:41:12,0,29:12:404:0,29:0,988:-76.8876,-80.4999,-113.234,0,-33.0722,-24.3423 0|0:145:6,9,130:6:202:9,130:322,4381:-375.97,-351.519,-365.177,-22.7746,-12.8645,0 dDocent_Contig_1073 33 . T C 456.548 . AB=0.201835;ABP=87.1798;AC=1;AF=0.0833333;AN=12;AO=32;CIGAR=1X;DP=475;DPB=475;DPRA=1.82128;EPP=72.4974;EPPR=964.973;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.71875;PAIREDR=0.975169;PAO=0;PQA=0;PQR=0;PRO=0;QA=1274;QR=17854;RO=443;RPL=0;RPP=72.4974;RPPR=964.973;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=443;SRP=964.973;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:47:47,0:47:1886:0:0:0,-14.1484,-169.942 0/0:87:84,3:84:3401:3:122:0,-14.8171,-294.746 0/0:67:66,1:66:2657:1:40:0,-16.1733,-235.248 0/0:82:80,2:80:3220:2:81:0,-16.9987,-282.17 0/0:83:79,4:79:3177:4:159:0,-10.2935,-271.291 0/1:109:87,22:87:3513:22:872:-45.9736,0,-283.379 dDocent_Contig_1074 98 . N T 76.4477 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=2;CIGAR=1X12I9X;DP=39;DPB=49.9;DPRA=3.47826;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=2;PQA=35;PQR=0;PRO=0;QA=76;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:1:0,0:0:0:0:0:0,0,0 1|1:10:0,0:0:0:0:0:0,0,0 1|1:2:0,0:0:0:0:0:0,0,0 1|1:16:0,2:0:0:2:76:-6.83724,-0.60206,0 1|1:6:0,0:0:0:0:0:0,0,0 1|1:4:0,0:0:0:0:0:0,0,0 dDocent_Contig_1075 19 . C T 2463.24 . AB=0.121726;ABP=2422.89;AC=5;AF=0.416667;AN=12;AO=263;CIGAR=1X;DP=2278;DPB=2278;DPRA=0;EPP=574.108;EPPR=4376.36;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=59.8798;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.985104;PAO=0;PQA=0;PQR=0;PRO=0;QA=10307;QR=79958;RO=2014;RPL=0;RPP=574.108;RPPR=4376.36;RPR=263;RUN=1;SAF=263;SAP=574.108;SAR=0;SRF=2014;SRP=4376.36;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:348:314,34:314:12526:34:1323:-14.5735,0,-1020.99 0/1:531:445,85:445:17754:85:3360:-142.81,0,-1436.01 0/0:331:305,26:305:12095:26:1036:0,-6.11108,-994.172 0/1:272:231,41:231:9122:41:1590:-61.4488,0,-738.563 0/1:417:375,42:375:14800:42:1644:-22.6615,0,-1204.72 0/1:379:344,35:344:13661:35:1354:-8.03152,0,-1114.11 dDocent_Contig_1076 1 . N G 328.163 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=3.25157;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0.444444;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=341;QR=0;RO=0;RPL=0;RPP=22.5536;RPPR=0;RPR=9;RUN=1;SAF=4;SAP=3.25157;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:118:-11.0016,-0.90309,0 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 1/1:3:0,3:0:0:3:108:-10.0752,-0.90309,0 1/1:2:0,2:0:0:2:74:-7.02588,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1077 7 . T C 6144.82 . AB=0.305147;ABP=272.113;AC=6;AF=0.5;AN=12;AO=249;CIGAR=2X;DP=816;DPB=816;DPRA=0;EPP=543.707;EPPR=1184.31;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=59.9745;NS=6;NUMALT=2;ODDS=0;PAIRED=0.991968;PAIREDR=0.79562;PAO=0;PQA=0;PQR=0;PRO=0;QA=9537;QR=20911;RO=548;RPL=0;RPP=543.707;RPPR=1192.98;RPR=249;RUN=1;SAF=249;SAP=543.707;SAR=0;SRF=547;SRP=1184.31;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:108:69,39,0:69:2644:39,0:1492,0:-102.047,0,-205.642,-122.818,-217.383,-339.818 0|1:170:129,41,0:129:4928:41,0:1561,0:-89.5886,0,-392.377,-128.422,-404.719,-532.76 0|1:143:102,37,2:102:3915:37,2:1425,77:-86.2994,0,-310.221,-110.682,-315.037,-431.441 0|1:116:67,42,4:67:2535:42,4:1616,152:-112.51,0,-195.165,-120.214,-195.343,-326.818 0|1:171:115,55,0:115:4360:55,0:2101,0:-137.759,0,-340.916,-172.377,-357.473,-529.859 0|1:108:66,35,7:66:2529:35,7:1342,273:-90.2754,0,-196.952,-87.7012,-185.046,-293.088 dDocent_Contig_1078 107 . N G 376.82 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=12;CIGAR=1X;DP=12;DPB=12;DPRA=0;EPP=29.068;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=10.1503;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=415;QR=0;RO=0;RPL=0;RPP=29.068;RPPR=0;RPR=12;RUN=1;SAF=0;SAP=29.068;SAR=12;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:12:0,12:0:0:12:415:-37.682,-3.61236,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1080 47 . G C 6935.74 . AB=0.216793;ABP=1015.26;AC=6;AF=0.5;AN=12;AO=315;CIGAR=1X;DP=1453;DPB=1453;DPRA=0;EPP=687.024;EPPR=2465.47;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.933333;PAIREDR=0.996485;PAO=0;PQA=0;PQR=0;PRO=0;QA=12599;QR=44915;RO=1138;RPL=0;RPP=687.024;RPPR=2465.47;RPR=315;RUN=1;SAF=315;SAP=687.024;SAR=0;SRF=1138;SRP=2474.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:252:203,49:203:8045:49:1988:-103.244,0,-647.767 0/1:261:180,81:180:7152:81:3238:-212.909,0,-564.782 0/1:188:138,50:138:5412:50:2014:-124.848,0,-430.359 0/1:234:176,58:176:6939:58:2295:-136.272,0,-553.78 0/1:248:211,37:211:8284:37:1487:-59.4203,0,-670.471 0/1:270:230,40:230:9083:40:1577:-60.8776,0,-735.667 dDocent_Contig_1081 98 . N C 281.097 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=12;CIGAR=1X;DP=13;DPB=13;DPRA=0;EPP=29.068;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=289;QR=0;RO=0;RPL=12;RPP=29.068;RPPR=0;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:10:-0.999996,-0.30103,0 1/1:4:0,4:0:0:4:109:-10.0806,-1.20412,0 1/1:2:0,2:0:0:2:52:-4.93868,-0.60206,0 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 1/1:3:0,2:0:0:2:44:-4.03311,-0.60206,0 1/1:2:0,2:0:0:2:42:-3.98934,-0.60206,0 dDocent_Contig_1082 1 . N G 77.0277 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.21888;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 dDocent_Contig_1083 34 . G A 639.704 . AB=0.112426;ABP=885.014;AC=1;AF=0.0833333;AN=12;AO=236;CIGAR=1X;DP=4158;DPB=4158;DPRA=0;EPP=515.478;EPPR=8515.18;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.99949;PAO=0;PQA=0;PQR=0;PRO=0;QA=9333;QR=154607;RO=3920;RPL=0;RPP=515.478;RPPR=8515.18;RPR=236;RUN=1;SAF=236;SAP=515.478;SAR=0;SRF=3920;SRP=8515.18;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:676:600,76:600:23654:76:2971:-63.9878,0,-1923.43 0/0:791:725,66:725:28666:66:2627:0,-1.54706,-2340.95 0/0:494:478,15:478:18909:15:605:0,-94.0284,-1645.53 0/0:674:633,41:633:24905:41:1630:0,-55.9608,-2092.47 0/0:771:744,26:744:29269:26:1020:0,-140.056,-2539.66 0/0:752:740,12:740:29204:12:480:0,-182.824,-2582.33 dDocent_Contig_1084 19 . G T 168.006 . AB=0.142857;ABP=34.0313;AC=0;AF=0;AN=12;AO=4;CIGAR=1X3M11I1X;DP=254;DPB=262.8;DPRA=0.724138;EPP=11.6962;EPPR=485.077;GTI=0;LEN=1;MEANALT=3;MQM=8;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0.810811;PAO=0;PQA=0;PQR=0;PRO=0;QA=157;QR=8502;RO=222;RPL=0;RPP=11.6962;RPPR=485.077;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=222;SRP=485.077;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:32:25,0,2,5:25:977:0,2,5:0,81,169:-6.1166,-13.6423,-93.9921,-6.94409,-87.3115,-86.7095,0,-80.3104,-73.6302,-78.8053 0|0:48:42,0,4,2:42:1625:0,4,2:0,148,79:0,-12.6433,-146.129,-0.556888,-134.027,-132.823,-6.13398,-139.627,-127.526,-139.025 0|0:28:18,4,1,5:18:690:4,1,5:157,37,198:-11.0071,-14.8753,-70.2939,-13.3872,-68.4716,-69.8002,0,-55.1984,-53.7919,-55.3156 0|0:78:70,0,0,7:70:2650:0,0,7:0,0,272:-1.25917,-22.3313,-239.552,-22.3313,-239.552,-239.552,0,-217.201,-217.201,-215.094 0|0:38:38,0,0,0:38:1466:0,0,0:0,0,0:0,-11.4391,-132.207,-11.4391,-132.207,-132.207,-11.4391,-132.207,-132.207,-132.207 0|0:30:29,0,0,0:29:1094:0,0,0:0,0,0:0,-8.72987,-98.3687,-8.72987,-98.3687,-98.3687,-8.72987,-98.3687,-98.3687,-98.3687 dDocent_Contig_1085 64 . C T 209.887 . AB=0.297297;ABP=16.2152;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=217;DPB=217;DPRA=1.23881;EPP=33.4109;EPPR=443.819;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.945813;PAO=0;PQA=0;PQR=0;PRO=0;QA=453;QR=6895;RO=203;RPL=14;RPP=33.4109;RPPR=443.819;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=203;SRP=443.819;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:46:43,3:43:1454:3:96:0,-4.88944,-122.196 0/0:27:27,0:27:937:0:0:0,-8.12781,-84.6452 0/0:58:58,0:58:1943:0:0:0,-17.4597,-175.144 0/0:24:24,0:24:824:0:0:0,-7.22472,-74.477 0/0:25:25,0:25:865:0:0:0,-7.52575,-78.1673 0/1:37:26,11:26:872:11:357:-21.3075,0,-67.6499 dDocent_Contig_1086 8 . G T 11879.8 . AB=0.316667;ABP=440.924;AC=2;AF=0.166667;AN=12;AO=475;CIGAR=1M1I1M2X;DP=5302;DPB=5421;DPRA=0.789058;EPP=1034.46;EPPR=10445.6;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=18222;QR=182715;RO=4809;RPL=0;RPP=1034.46;RPPR=10445.6;RPR=475;RUN=1;SAF=475;SAP=1034.46;SAR=0;SRF=4809;SRP=10445.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:882:880,0:880:33444:0:0:0,-264.906,-3007.84 0|0:1250:1247,0:1247:47382:0:0:0,-375.384,-4261.36 0|0:775:770,0:770:29221:0:0:0,-231.793,-2628.06 0|0:895:892,0:892:33922:0:0:0,-268.519,-3050.83 0|1:621:444,173:444:16878:173:6626:-410.295,0,-1332.3 0|1:879:576,302:576:21868:302:11596:-778.503,0,-1702.35 dDocent_Contig_1087 98 . N G 72.0005 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1.5;MQM=30.3333;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=107;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,2:0:0:2:73:-4.33685,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-2.53626,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_1088 98 . N G 39.3004 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=1;CIGAR=11X1M;DP=1;DPB=1.33333;DPRA=0;EPP=5.18177;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=2.52573;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=39;QR=0;RO=0;RPL=1;RPP=5.18177;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=5.18177;SAR=1;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:1:0,1:0:0:1:39:-3.89656,-0.30103,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_1090 78 . T C 194.54 . AB=0.155963;ABP=115.07;AC=4;AF=0.333333;AN=12;AO=17;CIGAR=1X;DP=151;DPB=151;DPRA=1.29762;EPP=39.9253;EPPR=293.988;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.764706;PAIREDR=0.716418;PAO=0;PQA=0;PQR=0;PRO=0;QA=592;QR=4623;RO=134;RPL=17;RPP=39.9253;RPPR=293.988;RPR=0;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=134;SRP=293.988;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:27:24,3:24:829:3:102:-1.38899,0,-66.7948 0/1:30:23,7:23:780:7:243:-13.178,0,-61.4797 0/0:21:21,0:21:705:0:0:0,-6.32163,-63.7599 0/1:34:30,4:30:1052:4:140:-2.70984,0,-84.7557 0/0:21:21,0:21:746:0:0:0,-6.32163,-67.4655 0/1:18:15,3:15:511:3:107:-4.56363,0,-40.8952 dDocent_Contig_1091 23 . A T 69997.2 . AB=0.0560079;ABP=6942.72;AC=0;AF=0;AN=12;AO=227;CIGAR=1X1M1X;DP=4053;DPB=4053;DPRA=0;EPP=495.935;EPPR=3184.22;GTI=0;LEN=1;MEANALT=4.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8909;QR=57493;RO=1465;RPL=0;RPP=495.935;RPPR=3184.22;RPR=227;RUN=1;SAF=227;SAP=495.935;SAR=0;SRF=1465;SRP=3184.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:562:227,20,311:227:8881:20,311:787,12051:-921.556,-925.154,-1649.26,0,-665.413,-636.529 0|0:885:192,61,629:192:7552:61,629:2412,24208:-1929.39,-1788.7,-2391.5,0,-422.672,-431.809 0|0:721:223,32,464:223:8753:32,464:1223,18265:-1435.26,-1402.07,-2112.26,0,-619.505,-580.153 0|0:721:215,19,477:215:8417:19,477:754,18522:-1456.96,-1459.62,-2145.93,0,-629.96,-548.435 0|0:621:343,36,239:343:13481:36,239:1418,9221:-653.869,-640.478,-1738.42,0,-992.141,-1036.84 0|0:543:265,59,219:265:10409:59,219:2315,8368:-606.677,-496.072,-1334.37,0,-665.681,-790.131 dDocent_Contig_1092 17 . A C 193.789 . AB=0.0965147;ABP=530.457;AC=1;AF=0.0833333;AN=12;AO=50;CIGAR=1X;DP=2233;DPB=2233;DPRA=1.10417;EPP=111.584;EPPR=4736.82;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=59.2298;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.972477;PAO=0;PQA=0;PQR=0;PRO=0;QA=2031;QR=87041;RO=2180;RPL=0;RPP=111.584;RPPR=4736.82;RPR=50;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=2180;SRP=4736.82;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:373:362,9:362:14478:9:366:0,-78.782,-1263.74 0/0:202:202,0:202:8089:0:0:0,-60.8081,-720.371 0/0:201:197,4:197:7878:4:159:0,-45.8151,-690.947 0/1:373:336,36:336:13374:36:1465:-19.6976,0,-1068.4 0/0:590:589,1:589:23507:1:41:0,-173.513,-2109.51 0/0:494:494,0:494:19715:0:0:0,-148.709,-1767.04 dDocent_Contig_1093 17 . T C 5584.76 . AB=0.0628931;ABP=794.614;AC=8;AF=0.666667;AN=12;AO=30;CIGAR=1X14M;DP=586;DPB=586;DPRA=0;EPP=68.1545;EPPR=261.416;GTI=0;LEN=1;MEANALT=11.6;MQM=60;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1196;QR=4584;RO=119;RPL=0;RPP=68.1545;RPPR=261.416;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=119;SRP=261.416;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:93:13,5,0,5,12,9,5,26,1,9:13:498:5,0,5,12,9,5,26,1,9:202,0,198,468,342,190,996,39,350:-77.814,-65.0728,-104.435,-81.7274,-105.94,-122.595,-65.4299,-89.6429,-106.297,-104.792,-43.2579,-67.4707,-84.1253,-67.8278,-80.513,-53.6824,-77.8952,-94.5497,-78.2523,-56.0803,-91.8404,-66.1473,-90.3602,-107.015,-90.7173,-68.5452,-78.9697,-105.51,0,-24.2122,-40.8669,-24.5694,-2.39745,-12.8223,-25.2871,-33.0402,-78.5214,-102.734,-119.389,-103.091,-80.9194,-91.3438,-103.809,-37.661,-119.088,-52.97,-77.1829,-93.8375,-77.54,-55.3679,-65.7924,-78.2574,-12.1096,-90.6315,-91.1282 1|1:146:25,19,0,0,8,26,1,44,0,10:25:963:19,0,0,8,26,1,44,0,10:735,0,0,315,1010,34,1643,0,407:-130.879,-78.0387,-151.391,-138.405,-157.11,-217.476,-138.405,-157.11,-217.476,-217.476,-112.491,-131.196,-191.562,-191.562,-189.154,-55.414,-74.1199,-134.486,-134.486,-108.572,-126.659,-135.647,-154.353,-214.718,-214.718,-188.804,-131.728,-214.417,-3.9191,-22.6245,-82.9894,-82.9894,-57.0757,0,-80.2319,-69.7441,-138.405,-157.11,-217.476,-217.476,-191.562,-134.486,-214.718,-82.9894,-217.476,-104.829,-123.534,-183.9,-183.9,-157.986,-100.91,-181.143,-49.4134,-183.9,-180.89 0|1:104:23,20,0,0,5,7,12,27,1,5:23:883:20,0,0,5,7,12,27,1,5:778,0,0,196,273,457,1031,40,199:-77.652,-20.649,-87.108,-84.5757,-93.1286,-157.055,-84.5757,-93.1286,-157.055,-157.055,-68.4572,-77.0101,-140.937,-140.937,-139.432,-62.1356,-70.6884,-134.615,-134.615,-118.497,-132.508,-47.0935,-55.6462,-119.573,-119.573,-103.454,-97.1327,-115.96,0,-8.55217,-72.4786,-72.4786,-56.3602,-50.0386,-34.9966,-64.3508,-81.2804,-89.8334,-153.76,-153.76,-137.642,-131.32,-116.278,-69.1833,-153.459,-68.1892,-76.7421,-140.669,-140.669,-124.55,-118.229,-103.186,-56.0921,-137.374,-139.164 1|1:72:13,13,0,0,4,5,2,15,5,5:13:506:13,0,0,4,5,2,15,5,5:513,0,0,159,200,78,599,201,199:-46.0523,-7.75241,-45.4274,-49.9657,-49.3408,-91.5531,-49.9657,-49.3408,-91.5531,-91.5531,-36.8735,-36.2485,-78.4611,-78.4611,-77.257,-33.4891,-32.8641,-75.0768,-75.0768,-61.9848,-73.5717,-43.5538,-42.9289,-85.1413,-85.1413,-72.0493,-68.665,-84.5392,-0.625282,0,-42.2143,-42.2143,-29.1218,-25.7373,-35.8023,-37.6988,-33.5382,-32.9132,-75.126,-75.126,-62.0339,-58.6496,-68.7141,-25.7865,-73.6208,-33.5791,-32.9541,-75.1669,-75.1669,-62.0748,-58.6905,-68.755,-25.8274,-58.7396,-73.6617 0|1:109:31,5,0,0,0,11,2,49,0,0:31:1183:5,0,0,0,11,2,49,0,0:192,0,0,0,436,77,1899,0,0:-146.675,-140.247,-235.791,-156.007,-237.296,-253.055,-156.007,-237.296,-253.055,-253.055,-156.007,-237.296,-253.055,-253.055,-253.055,-120.117,-201.407,-217.166,-217.166,-217.166,-213.855,-149.685,-230.974,-246.733,-246.733,-246.733,-210.844,-246.131,0,-81.293,-97.0529,-97.0529,-97.0529,-61.1611,-90.7305,-82.3024,-156.007,-237.296,-253.055,-253.055,-253.055,-217.166,-246.733,-97.0529,-253.055,-156.007,-237.296,-253.055,-253.055,-253.055,-217.166,-246.733,-97.0529,-253.055,-253.055 0|1:62:14,5,7,0,0,0,0,28,0,1:14:551:5,7,0,0,0,0,28,0,1:198,250,0,0,0,0,1068,0,41:-83.3838,-71.3016,-115.128,-67.2281,-96.262,-110.451,-87.5982,-116.633,-112.558,-132.929,-87.5982,-116.633,-112.558,-132.929,-132.929,-87.5982,-116.633,-112.558,-132.929,-132.929,-132.929,-87.5982,-116.633,-112.558,-132.929,-132.929,-132.929,-132.929,0,-29.0355,-24.9654,-45.3319,-45.3319,-45.3319,-45.3319,-36.9031,-87.5982,-116.633,-112.558,-132.929,-132.929,-132.929,-132.929,-45.3319,-132.929,-84.2136,-113.248,-109.173,-129.544,-129.544,-129.544,-129.544,-41.9472,-129.544,-129.243 dDocent_Contig_1094 1 . N G 398.203 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=12;CIGAR=1X;DP=12;DPB=12;DPRA=0;EPP=29.068;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=49.5;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=436;QR=0;RO=0;RPL=0;RPP=29.068;RPPR=0;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 1/1:3:0,3:0:0:3:123:-11.4648,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:7:0,7:0:0:7:231:-19.5451,-2.10721,0 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_1096 8 . G A 5882.43 . AB=0.0681818;ABP=573.121;AC=0;AF=0;AN=12;AO=24;CIGAR=1X4M1X1M1X2M1X3M;DP=401;DPB=401;DPRA=0;EPP=55.1256;EPPR=76.8404;GTI=0;LEN=1;MEANALT=6.8;MQM=37.3333;MQMR=21.4118;NS=6;NUMALT=7;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=723;QR=1307;RO=34;RPL=0;RPP=55.1256;RPPR=76.8404;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=34;SRP=76.8404;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:79:12,1,2,19,5,39,0,0:12:461:1,2,19,5,39,0,0:35,69,387,201,1400,0,0:-116.061,-116.87,-135.701,-114.145,-130.474,-132.675,-94.1569,-110.471,-107.747,-107.555,-103.173,-119.502,-116.776,-96.7746,-120.8,-6.38252,-22.7139,-19.9867,0,-9.00244,-13.7792,-119.673,-136.002,-133.277,-113.274,-122.305,-25.5194,-138.806,-119.673,-136.002,-133.277,-113.274,-122.305,-25.5194,-138.806,-138.806 0|0:70:5,2,5,24,2,25,3,0:5:192:2,5,24,2,25,3,0:74,118,447,78,979,115,0:-99.5693,-95.1564,-101.65,-92.5183,-93.6949,-98.1079,-73.4237,-74.5911,-71.9608,-73.2828,-94.6926,-95.8701,-93.2311,-74.1269,-101.186,-20.5569,-21.7335,-19.0939,0,-21.2693,-20.1299,-91.8696,-93.047,-90.4081,-71.3049,-92.5832,-18.4441,-98.0622,-101.074,-102.252,-99.613,-80.5076,-101.788,-27.6557,-98.9653,-108.17 0|0:70:6,0,7,12,7,32,5,0:6:236:0,7,12,7,32,5,0:0,160,364,266,1232,197,0:-115.025,-116.832,-128.763,-105.403,-117.333,-115.226,-89.187,-101.116,-89.6898,-97.5037,-95.1542,-107.086,-95.6561,-79.4385,-104.978,-15.7229,-27.6551,-16.2288,0,-5.963,-18.0222,-101.152,-113.084,-101.654,-85.4363,-91.405,-11.9654,-111.578,-116.832,-128.763,-117.333,-101.116,-107.086,-27.6551,-113.084,-128.763 0|0:74:7,5,5,37,0,15,2,0:7:259:5,5,37,0,15,2,0:190,192,637,0,557,80,0:-71.0453,-58.3957,-66.942,-57.7437,-53.0375,-66.29,-35.2847,-30.5566,-29.9035,-34.1716,-73.1525,-68.4471,-67.7952,-45.3097,-83.2032,-27.8373,-23.1295,-22.4773,0,-37.8914,-33.3759,-66.6648,-61.9592,-61.3072,-38.8226,-76.7159,-31.4016,-76.1138,-73.1525,-68.4471,-67.7952,-45.3097,-83.2032,-37.8914,-76.7159,-83.2032 0|0:59:1,5,5,18,0,20,10,0:1:40:5,5,18,0,20,10,0:190,184,351,0,777,385,0:-92.9282,-78.5175,-78.416,-78.5807,-65.2717,-78.4793,-70.7937,-57.4894,-57.5528,-66.7765,-93.2292,-79.9212,-79.9844,-72.195,-94.633,-29.3775,-16.0611,-16.1244,-8.36814,-30.7813,-24.7607,-62.4705,-49.1598,-49.2231,-41.4484,-63.8741,0,-60.8638,-93.2292,-79.9212,-79.9844,-72.195,-94.633,-30.7813,-63.8741,-94.633 0|0:49:3,0,0,1,6,22,13,4:3:119:0,0,1,6,22,13,4:0,0,40,235,767,514,76:-97.6112,-98.5143,-102.99,-98.5143,-102.99,-102.99,-95.2334,-99.7085,-99.7085,-99.4075,-79.1838,-83.6583,-83.6583,-80.3768,-81.8521,-36.9973,-41.4648,-41.4648,-38.1825,-22.1245,-34.8422,-57.0834,-61.5567,-61.5567,-58.2746,-42.2186,0,-57.6433,-93.9702,-98.4435,-98.4435,-95.1626,-79.1138,-36.933,-57.0147,-97.2393 dDocent_Contig_1098 130 . T C 530.041 . AB=0.132383;ABP=579.362;AC=2;AF=0.166667;AN=12;AO=101;CIGAR=1X;DP=1727;DPB=1727;DPRA=0.798266;EPP=222.329;EPPR=3525.14;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998767;PAO=0;PQA=0;PQR=0;PRO=0;QA=3487;QR=56470;RO=1622;RPL=0;RPP=222.329;RPPR=3525.14;RPR=101;RUN=1;SAF=0;SAP=222.329;SAR=101;SRF=0;SRP=3525.14;SRR=1622;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:256:246,7:246:8589:7:246:0,-54.0264,-750.551 0/1:327:283,43:283:9819:43:1484:-35.3727,0,-785.208 0/1:164:142,22:142:4964:22:750:-18.445,0,-397.55 0/0:332:304,28:304:10499:28:971:0,-12.2432,-857.16 0/0:346:346,0:346:12045:0:0:0,-104.156,-1083.95 0/0:302:301,1:301:10554:1:36:0,-87.3128,-946.206 dDocent_Contig_1099 54 . C T 859.581 . AB=0.173145;ABP=265.62;AC=2;AF=0.166667;AN=12;AO=51;CIGAR=1X;DP=695;DPB=695;DPRA=1.16511;EPP=113.755;EPPR=1399.27;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998445;PAO=0;PQA=0;PQR=0;PRO=0;QA=1983;QR=25345;RO=643;RPL=51;RPP=113.755;RPPR=1399.27;RPR=0;RUN=1;SAF=51;SAP=113.755;SAR=0;SRF=643;SRP=1399.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:91:89,2:89:3501:2:79:0,-19.8961,-307.634 0/0:103:102,0:102:4043:0:0:0,-30.7051,-363.78 0/0:113:113,0:113:4442:0:0:0,-34.0164,-399.734 0/0:105:105,0:105:4148:0:0:0,-31.6081,-373.293 0/1:133:112,21:112:4414:21:802:-32.4544,0,-357.178 0/1:150:122,28:122:4797:28:1102:-54.3173,0,-386.493 dDocent_Contig_1100 7 . T G 125.557 . AB=0.230769;ABP=19.3799;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=314;DPB=314;DPRA=1.05229;EPP=35.5824;EPPR=652.281;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.666667;PAIREDR=0.555184;PAO=0;PQA=0;PQR=0;PRO=0;QA=517;QR=11381;RO=299;RPL=0;RPP=35.5824;RPPR=652.281;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=299;SRP=652.281;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:67:64,3:64:2396:3:85:0,-12.2403,-207.925 0/0:68:62,6:62:2366:6:206:0,-1.59942,-194.283 0/1:26:20,6:20:774:6:226:-12.8742,0,-62.1604 0/0:48:48,0:48:1828:0:0:0,-14.4494,-164.772 0/0:49:49,0:49:1867:0:0:0,-14.7505,-168.279 0/0:56:56,0:56:2150:0:0:0,-16.8577,-193.728 dDocent_Contig_1101 20 . G A 33.9218 . AB=0.105263;ABP=54.4399;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=204;DPB=204;DPRA=1.1145;EPP=13.8677;EPPR=435.133;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.643216;PAO=0;PQA=0;PQR=0;PRO=0;QA=202;QR=7855;RO=199;RPL=0;RPP=13.8677;RPPR=435.133;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=199;SRP=435.133;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:34,1:34:1342:1:38:0,-6.73878,-117.243 0/1:38:34,4:34:1324:4:164:-3.71076,0,-107.976 0/0:20:20,0:20:801:0:0:0,-6.0206,-72.4074 0/0:32:32,0:32:1278:0:0:0,-9.63296,-115.282 0/0:35:35,0:35:1386:0:0:0,-10.536,-124.995 0/0:44:44,0:44:1724:0:0:0,-13.2453,-155.369 dDocent_Contig_1102 38 . T C 32919.5 . AB=0.618436;ABP=211.842;AC=6;AF=0.5;AN=12;AO=1060;CIGAR=1X3M;DP=1714;DPB=1714;DPRA=0;EPP=2304.77;EPPR=1288.52;GTI=0;LEN=1;MEANALT=2.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.993243;PAO=0;PQA=0;PQR=0;PRO=0;QA=42191;QR=23210;RO=592;RPL=0;RPP=2304.77;RPPR=1288.52;RPR=1060;RUN=1;SAF=1060;SAP=2304.77;SAR=0;SRF=592;SRP=1288.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:145:18,0,127:18:696:0,127:0,5047:-410.466,-415.884,-473.045,0,-57.5484,-19.3176 0|1:223:82,16,123:82:3197:16,123:601,4851:-374.4,-349.861,-607.799,0,-213.542,-225.739 0|1:102:11,10,81:11:437:10,81:392,3270:-266.261,-237.342,-270.305,0,-3.74725,-11.5937 0|1:230:66,0,163:66:2605:0,163:0,6504:-515.731,-535.599,-749.939,0,-214.336,-165.268 0|1:506:192,21,291:192:7514:21,291:812,11553:-893.198,-884.309,-1495.75,0,-551.08,-530.168 0|1:508:223,8,275:223:8761:8,275:321,10966:-835.889,-876.569,-1594.71,0,-694.093,-637.759 dDocent_Contig_1103 7 . T C 564.903 . AB=0.136628;ABP=397.537;AC=1;AF=0.0833333;AN=12;AO=80;CIGAR=1X;DP=1957;DPB=1957;DPRA=1.0631;EPP=176.728;EPPR=4072.35;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996265;PAO=0;PQA=0;PQR=0;PRO=0;QA=3057;QR=70870;RO=1874;RPL=0;RPP=176.728;RPPR=4072.35;RPR=80;RUN=1;SAF=80;SAP=176.728;SAR=0;SRF=1874;SRP=4072.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:290:290,0:290:10917:0:0:0,-87.2987,-982.143 0/0:295:286,8:286:10837:8:311:0,-60.2805,-946.638 0/0:349:336,12:336:12789:12:463:0,-62.8595,-1108.49 0/0:336:336,0:336:12686:0:0:0,-101.146,-1141.25 0/0:343:329,13:329:12437:13:504:0,-57.5402,-1073.14 0/1:344:297,47:297:11204:47:1779:-56.8091,0,-904.412 dDocent_Contig_1104 7 . T G 95591.6 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=3351;CIGAR=1X;DP=3488;DPB=3488;DPRA=0;EPP=7279.61;EPPR=261.416;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=107871;QR=1623;RO=119;RPL=0;RPP=7279.61;RPPR=261.416;RPR=3351;RUN=1;SAF=3351;SAP=7279.61;SAR=0;SRF=119;SRP=261.416;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:574:22,551:22:282:551:17573:-1555.57,-147.093,0 1/1:652:19,629:19:239:629:20270:-1802.02,-173.602,0 1/1:330:13,316:13:177:316:10467:-925.767,-83.0848,0 1/1:591:23,566:23:313:566:18486:-1634.87,-149.151,0 1/1:720:21,695:21:307:695:22060:-1956.91,-187.903,0 1/1:621:21,594:21:305:594:19015:-1683.18,-157.667,0 dDocent_Contig_1105 81 . T C 24437.1 . AB=0.254182;ABP=2575.86;AC=6;AF=0.5;AN=12;AO=1246;CIGAR=1X;DP=4902;DPB=4902;DPRA=0;EPP=2708.66;EPPR=7939.74;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999197;PAIREDR=0.998358;PAO=0;PQA=0;PQR=0;PRO=0;QA=43585;QR=127806;RO=3655;RPL=1246;RPP=2708.66;RPPR=7939.74;RPR=0;RUN=1;SAF=1246;SAP=2708.66;SAR=0;SRF=3655;SRP=7939.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:801:553,248:553:18954:248:8552:-528.616,0,-1464.46 0/1:859:590,269:590:20365:269:9309:-579.248,0,-1573.93 0/1:545:434,111:434:15278:111:3928:-189.656,0,-1210.71 0/1:761:533,227:533:18788:227:8022:-493.16,0,-1461.68 0/1:1098:892,206:892:31421:206:7262:-323.115,0,-2496.47 0/1:838:653,185:653:23000:185:6512:-333.912,0,-1817.18 dDocent_Contig_1106 27 . C A 114.18 . AB=0.140351;ABP=67.0497;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=639;DPB=639;DPRA=0.561122;EPP=26.8965;EPPR=1364.52;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995215;PAO=0;PQA=0;PQR=0;PRO=0;QA=438;QR=24498;RO=627;RPL=0;RPP=26.8965;RPPR=1364.52;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=627;SRP=1364.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:103:102,0:102:4003:0:0:0,-30.7051,-359.918 0/0:227:227,0:227:8920:0:0:0,-68.3338,-802.359 0/0:83:80,3:80:3123:3:121:0,-13.7053,-269.882 0/0:112:112,0:112:4344:0:0:0,-33.7154,-390.944 0/1:57:49,8:49:1853:8:317:-11.7368,0,-149.825 0/0:57:57,0:57:2255:0:0:0,-17.1587,-203.129 dDocent_Contig_1107 98 . N T 176.349 . AB=0;ABP=0;AC=6;AF=0.75;AN=8;AO=6;CIGAR=1X;DP=8;DPB=8;DPRA=2.33333;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=4.33681e-19;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=180;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 0/0:1:0,0:0:0:0:0:0,0,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:55:-5.22451,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:4:0,3:0:0:3:90:-8.18743,-0.90309,0 dDocent_Contig_1108 21 . C T 60.8938 . AB=0.1;ABP=128.087;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=197;DPB=197;DPRA=1.89706;EPP=24.725;EPPR=409.076;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=408;QR=7389;RO=187;RPL=0;RPP=24.725;RPPR=409.076;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=187;SRP=409.076;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1059:0:0:0,-8.12781,-95.5999 0/0:39:38,1:38:1523:1:41:0,-7.6456,-133.214 0/1:37:34,3:34:1324:3:123:-0.326678,0,-108.282 0/1:53:47,6:47:1849:6:244:-6.38424,0,-150.659 0/0:18:18,0:18:704:0:0:0,-5.41854,-63.681 0/0:23:23,0:23:930:0:0:0,-6.92369,-84.0031 dDocent_Contig_1109 1 . N G 146.509 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=151;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:70:-6.64712,-0.60206,0 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1110 46 . A G 4555.35 . AB=0.25498;ABP=395.666;AC=4;AF=0.333333;AN=12;AO=220;CIGAR=1X;DP=1217;DPB=1217;DPRA=0;EPP=480.734;EPPR=2152.78;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.990909;PAIREDR=0.970825;PAO=0;PQA=0;PQR=0;PRO=0;QA=8680;QR=39278;RO=994;RPL=0;RPP=480.734;RPPR=2152.78;RPR=220;RUN=1;SAF=220;SAP=480.734;SAR=0;SRF=994;SRP=2161.45;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:115:102,13:102:4039:13:509:-11.5334,0,-328.874 0/0:247:228,19:228:8943:19:735:0,-7.88453,-737.923 0/1:107:93,13:93:3708:13:524:-15.1888,0,-301.424 0/0:217:208,9:208:8227:9:352:0,-33.2858,-707.971 0/1:275:176,99:176:6959:99:3904:-268.597,0,-543.236 0/1:256:187,67:187:7402:67:2656:-162.621,0,-589.289 dDocent_Contig_1111 139 . T C 497.608 . AB=0.175439;ABP=159.471;AC=3;AF=0.25;AN=12;AO=36;CIGAR=1X;DP=343;DPB=343;DPRA=0.839394;EPP=81.1833;EPPR=669.652;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1361;QR=11605;RO=307;RPL=0;RPP=81.1833;RPPR=669.652;RPR=36;RUN=1;SAF=0;SAP=81.1833;SAR=36;SRF=0;SRP=669.652;SRR=307;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:27:23,4:23:867:4:154:-6.10565,0,-70.2206 0/0:65:60,5:60:2250:5:191:0,-2.00853,-185.16 0/0:41:40,1:40:1519:1:39:0,-8.44566,-133.084 0/0:66:66,0:66:2477:0:0:0,-19.868,-223.136 0/1:74:60,14:60:2251:14:533:-26.0377,0,-180.53 0/1:70:58,12:58:2241:12:444:-19.2268,0,-180.826 dDocent_Contig_1112 41 . C T 730.347 . AB=0.302083;ABP=35.6729;AC=1;AF=0.0833333;AN=12;AO=41;CIGAR=1X;DP=564;DPB=564;DPRA=1.54348;EPP=92.0407;EPPR=1138.69;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1581;QR=20937;RO=523;RPL=0;RPP=92.0407;RPPR=1138.69;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=523;SRP=1138.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:68:65,3:65:2600:3:107:0,-10.4892,-224.134 0/0:149:146,3:146:5854:3:117:0,-33.9449,-515.718 0/0:60:60,0:60:2413:0:0:0,-18.0618,-217.315 0/0:113:107,6:107:4240:6:224:0,-13.5008,-361.042 0/0:78:78,0:78:3143:0:0:0,-23.4803,-282.932 0/1:96:67,29:67:2687:29:1133:-73.3534,0,-213.044 dDocent_Contig_1113 45 . T C 32.1907 . AB=0.0921053;ABP=112.841;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=478;DPB=478;DPRA=0.888218;EPP=26.8965;EPPR=1017.09;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.972163;PAO=0;PQA=0;PQR=0;PRO=0;QA=449;QR=18380;RO=467;RPL=0;RPP=26.8965;RPPR=1017.09;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=467;SRP=1017.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:76:69,7:69:2718:7:286:-3.23654,0,-221.867 0/0:87:87,0:87:3428:0:0:0,-26.1896,-308.563 0/0:71:67,4:67:2656:4:163:0,-6.3147,-224.107 0/0:79:79,0:79:3056:0:0:0,-23.7814,-275.117 0/0:92:92,0:92:3627:0:0:0,-27.6948,-326.461 0/0:73:73,0:73:2895:0:0:0,-21.9752,-260.655 dDocent_Contig_1114 8 . G T 215.937 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=2;CIGAR=1X1M1X3M1I5M;DP=144;DPB=145.091;DPRA=1.06667;EPP=7.35324;EPPR=274.444;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=79;QR=4887;RO=125;RPL=0;RPP=7.35324;RPPR=274.444;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=125;SRP=274.444;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:32:29,2,0,0:29:1144:2,0,0:79,0,0:0,-2.23881,-95.7512,-8.72987,-96.3533,-102.854,-8.72987,-96.3533,-102.854,-102.854 0|0:23:21,0,0,2:21:810:0,0,2:0,0,80:-0.668101,-6.98973,-73.4914,-6.98973,-73.4914,-73.4914,0,-66.9,-66.9,-66.2979 0|0:30:29,0,0,1:29:1122:0,0,1:0,0,41:0,-8.72987,-100.864,-8.72987,-100.864,-100.864,-4.93633,-97.4787,-97.4787,-97.1777 0|0:23:17,0,6,0:17:665:0,6,0:0,225,0:-13.6541,-18.7716,-73.4596,0,-55.0665,-53.2603,-18.7716,-73.4596,-55.0665,-73.4596 0|0:13:9,0,1,3:9:357:0,1,3:0,41,108:-6.06132,-8.77059,-38.1754,-5.37407,-34.7896,-34.4886,0,-29.3762,-25.9908,-28.4732 0|0:23:20,0,3,0:20:789:0,3,0:0,116,0:-3.43678,-9.45738,-74.3972,0,-65.313,-64.4099,-9.45738,-74.3972,-65.313,-74.3972 dDocent_Contig_1115 14 . C T 6235.94 . AB=0.405204;ABP=45.0029;AC=5;AF=0.416667;AN=12;AO=229;CIGAR=1X;DP=675;DPB=675;DPRA=0;EPP=500.277;EPPR=969.316;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.8559;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.973799;PAIREDR=0.973034;PAO=0;PQA=0;PQR=0;PRO=0;QA=9210;QR=17774;RO=445;RPL=0;RPP=500.277;RPPR=969.316;RPR=229;RUN=1;SAF=229;SAP=500.277;SAR=0;SRF=445;SRP=969.316;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:89:43,45:43:1701:45:1808:-136.024,0,-126.413 0/1:133:64,69:64:2537:69:2779:-210.175,0,-188.425 0/1:115:81,34:81:3280:34:1365:-88.4895,0,-260.625 0/1:96:36,60:36:1456:60:2402:-186.72,0,-102.386 0/0:137:126,11:126:4992:11:449:0,-0.475233,-408.388 0/1:105:95,10:95:3808:10:407:-5.38224,0,-311.108 dDocent_Contig_1116 11 . A G 4097.32 . AB=0.261137;ABP=325.632;AC=2;AF=0.166667;AN=12;AO=195;CIGAR=1X;DP=1856;DPB=1856;DPRA=0.912481;EPP=426.447;EPPR=3605.48;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7700;QR=66327;RO=1659;RPL=0;RPP=426.447;RPPR=3605.48;RPR=195;RUN=1;SAF=195;SAP=426.447;SAR=0;SRF=1659;SRP=3605.48;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:342:342,0:342:13638:0:0:0,-102.952,-1226.41 0/0:229:225,4:225:9037:4:163:0,-53.8774,-797.718 0/0:319:298,21:298:11919:21:798:0,-23.9022,-999.728 0/0:315:314,0:314:12585:0:0:0,-94.5234,-1131.31 0/1:359:299,59:299:11896:59:2361:-104.465,0,-961.647 0/1:292:181,111:181:7252:111:4378:-306.08,0,-564.42 dDocent_Contig_1117 1 . N G 880.586 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=35;CIGAR=1X;DP=35;DPB=35;DPRA=0;EPP=79.0118;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=29.8;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1235;QR=0;RO=0;RPL=0;RPP=79.0118;RPPR=0;RPR=35;RUN=1;SAF=0;SAP=79.0118;SAR=35;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:61:-5.68071,-0.60206,0 1/1:8:0,8:0:0:8:283:-23.7103,-2.40824,0 1/1:5:0,5:0:0:5:178:-12.659,-1.50515,0 1/1:4:0,4:0:0:4:146:-12.3325,-1.20412,0 1/1:13:0,13:0:0:13:456:-26.1656,-3.91339,0 1/1:3:0,3:0:0:3:111:-6.66076,-0.90309,0 dDocent_Contig_1118 14 . T A 297.577 . AB=0.109718;ABP=425.059;AC=1;AF=0.0833333;AN=12;AO=48;CIGAR=1X;DP=2481;DPB=2481;DPRA=0.660643;EPP=107.241;EPPR=5284.03;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999589;PAO=0;PQA=0;PQR=0;PRO=0;QA=1914;QR=96340;RO=2432;RPL=0;RPP=107.241;RPPR=5284.03;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=2432;SRP=5284.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:319:284,35:284:11230:35:1395:-29.7755,0,-913.93 0/0:439:428,10:428:16899:10:397:0,-95.8922,-1483.55 0/0:229:226,3:226:9029:3:122:0,-57.5634,-800.702 0/0:444:444,0:444:17655:0:0:0,-133.657,-1587.55 0/0:621:621,0:621:24538:0:0:0,-186.94,-2206.35 0/0:429:429,0:429:16989:0:0:0,-129.142,-1527.7 dDocent_Contig_1119 11 . G T 2497.12 . AB=0.119576;ABP=2610.12;AC=3;AF=0.25;AN=12;AO=392;CIGAR=1X;DP=4389;DPB=4389;DPRA=0;EPP=854.227;EPPR=8678.04;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99975;PAO=0;PQA=0;PQR=0;PRO=0;QA=15387;QR=156900;RO=3995;RPL=0;RPP=854.227;RPPR=8678.04;RPR=392;RUN=1;SAF=392;SAP=854.227;SAR=0;SRF=3995;SRP=8678.04;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:506:470,36:470:18386:36:1419:0,-24.3609,-1525.37 0/1:832:741,91:741:29123:91:3559:-69.918,0,-2368.16 0/1:501:448,53:448:17516:53:2071:-35.7611,0,-1424.34 0/1:741:636,104:636:25116:104:4098:-145.643,0,-2035.14 0/0:947:874,73:874:34358:73:2881:0,-25.678,-2829.79 0/0:862:826,35:826:32401:35:1359:0,-137.022,-2790.68 dDocent_Contig_1121 7 . T G 1221.23 . AB=0.371212;ABP=22.0271;AC=4;AF=0.333333;AN=12;AO=57;CIGAR=1X2M4D2M3X;DP=367;DPB=347.583;DPRA=0.615556;EPP=126.784;EPPR=669.652;GTI=0;LEN=1;MEANALT=1.6;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=3;PQA=117;PQR=0;PRO=0;QA=2117;QR=11867;RO=307;RPL=0;RPP=126.784;RPPR=669.652;RPR=57;RUN=1;SAF=57;SAP=126.784;SAR=0;SRF=307;SRP=669.652;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:43:36,6:36:1377:6:227:-7.75253,0,-111.167 0|1:24:13,11:13:503:11:430:-31.4405,0,-38.0023 0|1:27:12,15:12:472:15:522:-39.1728,0,-34.704 0|1:38:20,17:20:781:17:637:-46.1624,0,-59.1169 0|0:145:136,8:136:5249:8:301:0,-16.1682,-444.949 0|0:90:90,0:90:3485:0:0:0,-27.0927,-313.755 dDocent_Contig_1122 98 . N A 252.61 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=253;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:3:0,3:0:0:3:84:-7.83769,-0.90309,0 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 1/1:2:0,2:0:0:2:58:-5.50886,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_1123 26 . T C 4929.73 . AB=0.158756;ABP=1857;AC=6;AF=0.5;AN=12;AO=291;CIGAR=1X;DP=1833;DPB=1833;DPRA=0;EPP=634.909;EPPR=3351.42;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.965636;PAIREDR=0.987678;PAO=0;PQA=0;PQR=0;PRO=0;QA=11640;QR=61305;RO=1542;RPL=0;RPP=634.909;RPPR=3351.42;RPR=291;RUN=1;SAF=291;SAP=634.909;SAR=0;SRF=1542;SRP=3351.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:271:245,26:245:9689:26:1037:-12.0405,0,-789.826 0/1:309:237,72:237:9479:72:2896:-167.715,0,-759.496 0/1:206:165,41:165:6577:41:1630:-84.9055,0,-529.637 0/1:364:325,39:325:12946:39:1561:-31.1515,0,-1054.6 0/1:323:264,59:264:10481:59:2349:-114.33,0,-845.378 0/1:360:306,54:306:12133:54:2167:-86.8281,0,-982.737 dDocent_Contig_1124 17 . A T 15056.9 . AB=0.80837;ABP=377.996;AC=7;AF=0.583333;AN=12;AO=463;CIGAR=1X;DP=553;DPB=553;DPRA=0;EPP=982.513;EPPR=181.457;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.987041;PAIREDR=0.955556;PAO=0;PQA=0;PQR=0;PRO=0;QA=18401;QR=3562;RO=90;RPL=0;RPP=1008.4;RPPR=198.443;RPR=463;RUN=1;SAF=460;SAP=982.513;SAR=3;SRF=88;SRP=181.457;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:95:24,71:24:968:71:2833:-226.47,0,-58.8209 0/1:107:27,80:27:1053:80:3184:-254.424,0,-62.848 0/1:56:6,50:6:229:50:2016:-164.766,0,-4.11433 0/1:100:18,82:18:717:82:3234:-261.018,0,-34.7508 0/1:96:12,84:12:477:84:3327:-270.585,0,-14.3785 1/1:99:3,96:3:118:96:3807:-331.632,-18.7993,0 dDocent_Contig_1125 9 . C G 256.053 . AB=0.119342;ABP=308.848;AC=2;AF=0.166667;AN=12;AO=45;CIGAR=1X;DP=590;DPB=590;DPRA=0;EPP=100.727;EPPR=1186.46;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1717;QR=20777;RO=545;RPL=0;RPP=100.727;RPPR=1186.46;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=545;SRP=1186.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:53,1:53:2009:1:39:0,-12.3591,-177.152 0/0:90:84,6:84:3198:6:234:0,-5.66159,-266.535 0/0:126:120,6:120:4603:6:227:0,-17.1373,-393.525 0/0:77:74,3:74:2832:3:116:0,-12.3616,-244.242 0/1:103:94,9:94:3596:9:349:-0.764801,0,-292.757 0/1:140:120,20:120:4539:20:752:-25.8615,0,-366.428 dDocent_Contig_1126 67 . T C 171.855 . AB=0.0972222;ABP=1321.94;AC=1;AF=0.0833333;AN=12;AO=219;CIGAR=1X;DP=5014;DPB=5014;DPRA=0;EPP=478.563;EPPR=10393.5;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.999582;PAO=0;PQA=0;PQR=0;PRO=0;QA=7974;QR=159351;RO=4785;RPL=219;RPP=478.563;RPPR=10393.5;RPR=0;RUN=1;SAF=219;SAP=478.563;SAR=0;SRF=4785;SRP=10393.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:687:679,6:679:22724:6:222:0,-186.08,-2024.44 0/0:953:939,12:939:30924:12:443:0,-246.185,-2742.39 0/0:712:688,23:688:23025:23:839:0,-138.387,-1995.99 0/0:786:726,58:726:24281:58:2088:0,-48.0507,-1996.66 0/1:936:845,91:845:28081:91:3323:-17.5043,0,-2244.98 0/0:940:908,29:908:30316:29:1059:0,-186.55,-2632.21 dDocent_Contig_1127 116 . G T 3291.14 . AB=0.492593;ABP=3.13898;AC=4;AF=0.333333;AN=12;AO=138;CIGAR=1X;DP=404;DPB=404;DPRA=0;EPP=302.673;EPPR=580.622;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.963768;PAIREDR=0.969925;PAO=0;PQA=0;PQR=0;PRO=0;QA=4747;QR=9217;RO=266;RPL=0;RPP=302.673;RPPR=580.622;RPR=138;RUN=1;SAF=0;SAP=302.673;SAR=138;SRF=0;SRP=580.622;SRR=266;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:33,21:33:1148:21:716:-48.5031,0,-87.3719 0/1:59:20,39:20:655:39:1344:-103.5,0,-41.4939 0/1:97:50,47:50:1734:47:1612:-116.172,0,-127.147 0/1:60:34,26:34:1173:26:901:-63.3443,0,-87.8131 0/0:72:68,4:68:2388:4:139:0,-8.82147,-202.328 0/0:62:61,1:61:2119:1:35:0,-15.1652,-187.484 dDocent_Contig_1128 12 . T C 563.859 . AB=0.131498;ABP=388.702;AC=1;AF=0.0833333;AN=12;AO=137;CIGAR=1X;DP=2590;DPB=2590;DPRA=0;EPP=300.502;EPPR=5327.46;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997961;PAO=0;PQA=0;PQR=0;PRO=0;QA=5509;QR=98450;RO=2452;RPL=0;RPP=300.502;RPPR=5327.46;RPR=137;RUN=1;SAF=137;SAP=300.502;SAR=0;SRF=2452;SRP=5327.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:327:284,43:284:11416:43:1718:-56.4036,0,-928.169 0/0:554:521,33:521:20918:33:1341:0,-45.8258,-1759.82 0/0:283:270,13:270:10831:13:525:0,-37.595,-926.416 0/0:396:371,25:371:14919:25:1000:0,-28.9131,-1251.2 0/0:547:545,1:545:21893:1:36:0,-161.109,-1964.84 0/0:483:461,22:461:18473:22:889:0,-65.0815,-1580.69 dDocent_Contig_1129 98 . N A 360.296 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=12;CIGAR=1X;DP=12;DPB=12;DPRA=0;EPP=29.068;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=370;QR=0;RO=0;RPL=12;RPP=29.068;RPPR=0;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:5:0,5:0:0:5:142:-13.0601,-1.50515,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 1/1:3:0,3:0:0:3:94:-8.77091,-0.90309,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 dDocent_Contig_1130 16 . G A 388.836 . AB=0.13242;ABP=260.027;AC=1;AF=0.0833333;AN=12;AO=91;CIGAR=1X;DP=1840;DPB=1840;DPRA=0;EPP=200.614;EPPR=3800.92;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.981704;PAO=0;PQA=0;PQR=0;PRO=0;QA=3618;QR=69111;RO=1749;RPL=0;RPP=200.614;RPPR=3800.92;RPR=91;RUN=1;SAF=91;SAP=200.614;SAR=0;SRF=1749;SRP=3800.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:270:269,1:269:10520:1:40:0,-77.2824,-942.184 0/0:431:419,12:419:16655:12:488:0,-85.4735,-1453.4 0/0:295:277,18:277:10915:18:712:0,-24.3952,-917.265 0/0:406:392,14:392:15489:14:563:0,-71.2073,-1341.83 0/0:219:202,17:202:7994:17:650:0,-7.09976,-660.238 0/1:219:190,29:190:7538:29:1165:-39.2024,0,-612.116 dDocent_Contig_1131 24 . A G 340.948 . AB=0.309524;ABP=16.2459;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=265;DPB=265;DPRA=0.715596;EPP=42.0968;EPPR=539.364;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.445344;PAO=0;PQA=0;PQR=0;PRO=0;QA=720;QR=9798;RO=247;RPL=0;RPP=42.0968;RPPR=539.364;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=247;SRP=539.364;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:32,1:32:1257:1:41:0,-5.83942,-109.306 0/0:53:53,0:53:2084:0:0:0,-15.9546,-187.75 0/0:35:33,2:33:1286:2:79:0,-3.03881,-108.512 0/0:56:56,0:56:2242:0:0:0,-16.8577,-201.945 0/0:46:44,2:44:1768:2:81:0,-6.16165,-151.649 0/1:42:29,13:29:1161:13:519:-34.4135,0,-92.1268 dDocent_Contig_1132 15 . T C 160551 . AB=0.82964;ABP=684.456;AC=11;AF=0.916667;AN=12;AO=4650;CIGAR=1X;DP=4903;DPB=4903;DPRA=0;EPP=10100.4;EPPR=548.05;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996016;PAO=0;PQA=0;PQR=0;PRO=0;QA=186187;QR=10115;RO=251;RPL=0;RPP=10100.4;RPPR=548.05;RPR=4650;RUN=1;SAF=4650;SAP=10100.4;SAR=0;SRF=251;SRP=548.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:722:123,599:123:4937:599:24014:-1941.8,0,-226.862 1/1:963:61,901:61:2467:901:36184:-3030.94,-67.5375,0 1/1:341:15,326:15:607:326:13024:-1116.24,-47.6841,0 1/1:730:28,702:28:1138:702:28107:-2424.37,-117.053,0 1/1:1176:24,1151:24:966:1151:46093:-4056.64,-266.882,0 1/1:971:0,971:0:0:971:38765:-3485.14,-292.3,0 dDocent_Contig_1133 19 . C T 107.174 . AB=0.2;ABP=22.5536;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=175;DPB=175;DPRA=0.833333;EPP=13.8677;EPPR=372.161;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.617647;PAO=0;PQA=0;PQR=0;PRO=0;QA=202;QR=6779;RO=170;RPL=0;RPP=13.8677;RPPR=372.161;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=170;SRP=372.161;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:1047:0:0:0,-7.82678,-94.5219 0/0:49:49,0:49:1960:0:0:0,-14.7505,-176.591 0/0:33:33,0:33:1296:0:0:0,-9.93399,-116.904 0/0:29:29,0:29:1147:0:0:0,-8.72987,-103.511 0/0:13:13,0:13:522:0:0:0,-3.91339,-47.3269 0/1:25:20,5:20:807:5:202:-11.0361,0,-65.4203 dDocent_Contig_1134 101 . N A 423.773 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=14;CIGAR=4X;DP=14;DPB=14;DPRA=0;EPP=33.4109;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0.785714;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=450;QR=0;RO=0;RPL=0;RPP=33.4109;RPPR=0;RPR=14;RUN=1;SAF=0;SAP=33.4109;SAR=14;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:7:0,7:0:0:7:234:-21.3877,-2.10721,0 1|1:3:0,3:0:0:3:87:-8.11768,-0.90309,0 1|1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 1|1:3:0,3:0:0:3:96:-8.95771,-0.90309,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_1135 23 . C T 3516.74 . AB=0.228198;ABP=444.488;AC=4;AF=0.333333;AN=12;AO=157;CIGAR=1X;DP=909;DPB=909;DPRA=1.55656;EPP=343.931;EPPR=1627.28;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.993631;PAIREDR=0.993351;PAO=0;PQA=0;PQR=0;PRO=0;QA=6225;QR=29869;RO=752;RPL=0;RPP=343.931;RPPR=1635.96;RPR=157;RUN=1;SAF=157;SAP=343.931;SAR=0;SRF=751;SRP=1627.28;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:195:165,30:165:6602:30:1172:-47.0444,0,-535.181 0/1:139:102,37:102:4027:37:1477:-91.3331,0,-320.572 0/1:216:159,57:159:6331:57:2273:-139.713,0,-504.515 0/1:138:105,33:105:4158:33:1303:-75.9889,0,-332.642 0/0:135:135,0:135:5337:0:0:0,-40.639,-480.178 0/0:86:86,0:86:3414:0:0:0,-25.8886,-307.303 dDocent_Contig_1136 98 . N T 1554.15 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=50;CIGAR=1X;DP=50;DPB=50;DPRA=0;EPP=111.584;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1696;QR=0;RO=0;RPL=50;RPP=111.584;RPPR=0;RPR=0;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:12:0,12:0:0:12:405:-36.775,-3.61236,0 1/1:7:0,7:0:0:7:238:-21.7527,-2.10721,0 1/1:4:0,4:0:0:4:140:-12.9449,-1.20412,0 1/1:8:0,8:0:0:8:272:-24.8119,-2.40824,0 1/1:5:0,5:0:0:5:173:-15.9102,-1.50515,0 1/1:14:0,14:0:0:14:468:-42.4407,-4.21442,0 dDocent_Contig_1137 20 . T C 321.534 . AB=0.229508;ABP=41.7764;AC=1;AF=0.0833333;AN=12;AO=24;CIGAR=1X;DP=297;DPB=297;DPRA=1.0913;EPP=55.1256;EPPR=595.822;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.375;PAIREDR=0.673993;PAO=0;PQA=0;PQR=0;PRO=0;QA=938;QR=10886;RO=273;RPL=0;RPP=55.1256;RPPR=595.822;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=273;SRP=595.822;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:49:47,2:47:1859:2:73:0,-7.8204,-160.583 0/0:49:48,1:48:1936:1:41:0,-10.6559,-170.337 0/0:46:46,0:46:1829:0:0:0,-13.8474,-164.823 0/0:47:44,3:44:1726:3:123:0,-2.68362,-144.09 0/0:45:41,4:41:1654:4:140:0,-0.610422,-136.15 0/1:61:47,14:47:1882:14:561:-32.4693,0,-151.216 dDocent_Contig_1138 8 . G A 5103.92 . AB=0.179328;ABP=1437.45;AC=4;AF=0.333333;AN=12;AO=335;CIGAR=1X;DP=2439;DPB=2439;DPRA=0;EPP=730.454;EPPR=4508.82;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=59.9976;NS=6;NUMALT=1;ODDS=0;PAIRED=0.964179;PAIREDR=0.982169;PAO=0;PQA=0;PQR=0;PRO=0;QA=12776;QR=78824;RO=2075;RPL=0;RPP=730.454;RPPR=4508.82;RPR=335;RUN=1;SAF=335;SAP=730.454;SAR=0;SRF=2075;SRP=4508.82;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:429:343,77:343:13026:77:2944:-138.339,0,-1045.02 0/1:580:469,105:469:17817:105:4003:-187.211,0,-1429.5 0/1:205:173,30:173:6593:30:1127:-40.2338,0,-531.784 0/1:392:305,76:305:11553:76:2910:-147.014,0,-924.282 0/0:422:402,19:402:15249:19:726:0,-61.454,-1306.06 0/0:411:383,28:383:14586:28:1066:0,-27.4786,-1215.84 dDocent_Contig_1139 23 . C T 142.71 . AB=0.173913;ABP=45.4956;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=262;DPB=262;DPRA=1.06481;EPP=20.3821;EPPR=554.564;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.598425;PAO=0;PQA=0;PQR=0;PRO=0;QA=312;QR=10277;RO=254;RPL=0;RPP=20.3821;RPPR=554.564;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=254;SRP=554.564;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1327:0:0:0,-9.93399,-119.689 0/1:46:38,8:38:1533:8:312:-14.5897,0,-124.359 0/0:40:40,0:40:1616:0:0:0,-12.0412,-145.664 0/0:52:52,0:52:2111:0:0:0,-15.6536,-190.158 0/0:45:45,0:45:1820:0:0:0,-13.5463,-164.004 0/0:46:46,0:46:1870:0:0:0,-13.8474,-168.496 dDocent_Contig_1140 93 . G T 488.801 . AB=0.115044;ABP=1166.61;AC=1;AF=0.0833333;AN=12;AO=108;CIGAR=1X;DP=5170;DPB=5170;DPRA=0.934517;EPP=237.529;EPPR=10986.3;GTI=0;LEN=1;MEANALT=1.5;MQM=59.9815;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999407;PAO=0;PQA=0;PQR=0;PRO=0;QA=3654;QR=170278;RO=5058;RPL=108;RPP=237.529;RPPR=10986.3;RPR=0;RUN=1;SAF=108;SAP=237.529;SAR=0;SRF=5058;SRP=10986.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:708:707,1:707:23668:1:35:0,-209.631,-2126.23 0/0:995:993,2:993:33476:2:41:0,-295.631,-3008.24 0/0:761:760,1:760:25774:1:13:0,-227.784,-2317.87 0/0:892:891,0:891:29882:0:0:0,-268.218,-2688.43 0/1:904:798,104:798:27064:104:3565:-49.1989,0,-2163.36 0/0:910:909,0:909:30414:0:0:0,-273.636,-2736.29 dDocent_Contig_1141 7 . T C 42112.4 . AB=0.503582;ABP=3.33702;AC=6;AF=0.5;AN=12;AO=1476;CIGAR=1X;DP=2931;DPB=2931;DPRA=0;EPP=3208.1;EPPR=3149.47;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997967;PAIREDR=0.99931;PAO=0;PQA=0;PQR=0;PRO=0;QA=56647;QR=54949;RO=1449;RPL=0;RPP=3208.1;RPPR=3149.47;RPR=1476;RUN=1;SAF=1476;SAP=3208.1;SAR=0;SRF=1449;SRP=3149.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:409:275,134:275:10464:134:5128:-338.407,0,-818.274 0/1:538:276,259:276:10411:259:9996:-738.004,0,-775.365 0/1:479:290,187:290:10930:187:7162:-500.567,0,-839.447 0/1:521:296,225:296:11277:225:8624:-619.076,0,-857.676 0/1:487:143,343:143:5437:343:13172:-1038.48,0,-342.916 0/1:497:169,328:169:6430:328:12565:-980.703,0,-429.006 dDocent_Contig_1142 44 . A G 10467.2 . AB=0.170753;ABP=3228.87;AC=4;AF=0.333333;AN=12;AO=586;CIGAR=1X;DP=5079;DPB=5079;DPRA=0.928667;EPP=1275.49;EPPR=9748.58;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=23147;QR=176615;RO=4492;RPL=0;RPP=1275.49;RPPR=9748.58;RPR=586;RUN=1;SAF=586;SAP=1275.49;SAR=0;SRF=4492;SRP=9757.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:744:625,119:625:24421:119:4674:-196.639,0,-1972.03 0/1:962:752,209:752:29569:209:8315:-458.511,0,-2369.4 0/1:743:639,104:639:25183:104:4127:-147.738,0,-2040.77 0/1:977:824,153:824:32238:153:6006:-246.237,0,-2604.71 0/0:753:752,1:752:29695:1:25:0,-224.176,-2667.58 0/0:900:900,0:900:35509:0:0:0,-270.927,-3192.76 dDocent_Contig_1143 8 . G C 95.9283 . AB=0.192308;ABP=24.391;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=225;DPB=225;DPRA=0.859504;EPP=18.2106;EPPR=476.391;GTI=0;LEN=1;MEANALT=1;MQM=59.5714;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.995413;PAO=0;PQA=0;PQR=0;PRO=0;QA=271;QR=8326;RO=218;RPL=0;RPP=18.2106;RPPR=476.391;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=218;SRP=476.391;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:26,1:26:992:1:39:0,-4.23125,-85.6958 0/0:26:26,0:26:996:0:0:0,-7.82678,-89.9505 0/1:26:21,5:21:806:5:193:-9.91159,0,-65.0394 0/0:40:40,0:40:1525:0:0:0,-12.0412,-137.521 0/0:55:55,0:55:2100:0:0:0,-16.5566,-189.231 0/0:51:50,1:50:1907:1:39:0,-11.456,-167.977 dDocent_Contig_1144 22 . T G 77768 . AB=0.796974;ABP=1217.95;AC=9;AF=0.75;AN=12;AO=2408;CIGAR=2X;DP=2817;DPB=2817;DPRA=0;EPP=5231.92;EPPR=854.227;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999585;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=95060;QR=15593;RO=392;RPL=0;RPP=5231.92;RPPR=854.227;RPR=2408;RUN=1;SAF=2408;SAP=5231.92;SAR=0;SRF=392;SRP=854.227;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:281:23,256:23:910:256:10078:-824.223,-2.18591,0 1|1:424:26,396:26:1038:396:15704:-1318.49,-33.7127,0 0|1:417:116,294:116:4607:294:11578:-917.439,0,-290.743 0|1:582:87,494:87:3444:494:19381:-1567.7,0,-134.91 1|1:526:33,492:33:1322:492:19409:-1626.06,-39.1865,0 0|1:587:107,476:107:4272:476:18910:-1524.51,0,-208.537 dDocent_Contig_1145 10 . A T 71.4141 . AB=0.104167;ABP=133.661;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=571;DPB=571;DPRA=1.01053;EPP=24.725;EPPR=1219.03;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=400;QR=21963;RO=560;RPL=0;RPP=24.725;RPPR=1219.03;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=560;SRP=1219.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:128:127,0:127:4988:0:0:0,-38.2308,-448.43 0/0:128:128,0:128:5057:0:0:0,-38.5318,-455.046 0/1:96:86,10:86:3366:10:400:-7.46014,0,-274.115 0/0:147:147,0:147:5710:0:0:0,-44.2514,-513.75 0/0:9:9,0:9:351:0:0:0,-2.70927,-31.9484 0/0:63:63,0:63:2491:0:0:0,-18.9649,-224.348 dDocent_Contig_1146 7 . A T 7871.46 . AB=0.267928;ABP=596.65;AC=6;AF=0.5;AN=12;AO=340;CIGAR=1X;DP=1269;DPB=1269;DPRA=0;EPP=741.311;EPPR=2000.8;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.917647;PAIREDR=0.727371;PAO=0;PQA=0;PQR=0;PRO=0;QA=13021;QR=35051;RO=928;RPL=0;RPP=741.311;RPPR=2018.14;RPR=340;RUN=1;SAF=340;SAP=741.311;SAR=0;SRF=926;SRP=2000.8;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:232:157,75:157:5911:75:2895:-190.881,0,-462.146 0/1:274:190,83:190:7179:83:3166:-202.523,0,-563.439 0/1:174:131,43:131:4954:43:1646:-96.0253,0,-393.52 0/1:255:197,58:197:7467:58:2196:-121.1,0,-595.143 0/1:170:133,37:133:5024:37:1417:-76.6334,0,-401.032 0/1:164:120,44:120:4516:44:1701:-103.98,0,-357.15 dDocent_Contig_1147 68 . A T 19045.2 . AB=0.462132;ABP=20.7719;AC=6;AF=0.5;AN=12;AO=659;CIGAR=1X;DP=1426;DPB=1426;DPRA=0;EPP=1434.01;EPPR=1668.53;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.996965;PAIREDR=0.993481;PAO=0;PQA=0;PQR=0;PRO=0;QA=25978;QR=30298;RO=767;RPL=659;RPP=1434.01;RPPR=1668.53;RPR=0;RUN=1;SAF=659;SAP=1434.01;SAR=0;SRF=767;SRP=1668.53;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:204:122,82:122:4829:82:3262:-232.238,0,-373.112 0/1:286:116,170:116:4548:170:6685:-515.293,0,-323.19 0/1:154:79,75:79:3149:75:2951:-219.318,0,-237.132 0/1:280:217,63:217:8622:63:2503:-141.131,0,-691.218 0/1:261:127,134:127:5036:134:5295:-397.836,0,-374.563 0/1:241:106,135:106:4114:135:5282:-402.703,0,-297.71 dDocent_Contig_1148 77 . T A 2797.05 . AB=0.331606;ABP=98.0825;AC=6;AF=0.5;AN=12;AO=128;CIGAR=1X;DP=386;DPB=386;DPRA=0;EPP=280.959;EPPR=563.25;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.515625;PAIREDR=0.635659;PAO=0;PQA=0;PQR=0;PRO=0;QA=4422;QR=8988;RO=258;RPL=82;RPP=24.9965;RPPR=20.8197;RPR=46;RUN=1;SAF=82;SAP=24.9965;SAR=46;SRF=152;SRP=20.8197;SRR=106;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:58:26,32:26:916:32:1048:-77.1537,0,-65.298 0/1:66:50,16:50:1730:16:566:-31.4036,0,-136.115 0/1:61:30,31:30:1059:31:1099:-80.8586,0,-77.2598 0/1:53:37,16:37:1297:16:556:-34.4131,0,-101.078 0/1:90:65,25:65:2268:25:875:-51.9749,0,-177.294 0/1:58:50,8:50:1718:8:278:-7.89814,0,-137.443 dDocent_Contig_1149 9 . C T 3481.91 . AB=0.133199;ABP=3494.85;AC=5;AF=0.416667;AN=12;AO=446;CIGAR=1X;DP=3756;DPB=3756;DPRA=0;EPP=971.487;EPPR=7177.56;GTI=0;LEN=1;MEANALT=1.5;MQM=51.7152;MQMR=54.6771;NS=6;NUMALT=1;ODDS=0;PAIRED=0.73991;PAIREDR=0.956416;PAO=0;PQA=0;PQR=0;PRO=0;QA=16537;QR=125941;RO=3304;RPL=0;RPP=971.487;RPPR=7177.56;RPR=446;RUN=1;SAF=446;SAP=971.487;SAR=0;SRF=3304;SRP=7177.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:468:404,64:404:15380:64:2362:-58.1547,0,-1181.45 0/1:750:627,123:627:23888:123:4563:-165.862,0,-1809.77 0/1:624:554,70:554:21145:70:2591:-24.4594,0,-1633.54 0/1:525:448,74:448:17001:74:2705:-71.2334,0,-1324.17 0/0:768:720,48:720:27457:48:1796:0,-80.8829,-2193.7 0/1:621:551,67:551:21070:67:2520:-31.6825,0,-1621.28 dDocent_Contig_1150 90 . G T 5553.17 . AB=0.0754717;ABP=583.777;AC=5;AF=0.416667;AN=12;AO=28;CIGAR=1X4M1X1M;DP=1601;DPB=1601.86;DPRA=0;EPP=63.8115;EPPR=1783.62;GTI=0;LEN=1;MEANALT=9;MQM=59.75;MQMR=59.9854;NS=6;NUMALT=6;ODDS=0;PAIRED=0.964286;PAIREDR=0.980488;PAO=0;PQA=0;PQR=13;PRO=0.5;QA=717;QR=24492;RO=820;RPL=28;RPP=63.8115;RPPR=1783.62;RPR=0;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=820;SRP=1783.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:228:100,53,0,10,7,14,38:100:2941:53,0,10,7,14,38:1618,0,314,202,453,1280:-94.1482,0,-218.58,-124.251,-234.534,-358.792,-99.3924,-209.675,-333.933,-330.922,-108.29,-218.573,-342.83,-317.971,-340.723,-87.7038,-197.987,-322.245,-297.386,-306.283,-318.03,-24.1699,-134.455,-258.714,-233.855,-242.752,-222.166,-247.275 0|1:316:196,50,0,9,4,13,35:196:5864:50,0,9,4,13,35:1325,0,292,113,436,1188:-39.3224,0,-453.606,-98.3243,-468.658,-567,-75.0973,-445.433,-543.775,-541.066,-89.9673,-460.301,-558.643,-535.418,-557.439,-63.0104,-433.348,-531.69,-508.465,-523.333,-527.777,-2.14936,-372.498,-470.84,-447.615,-462.483,-435.53,-460.304 0|0:197:102,30,0,6,4,15,32:102:3120:30,0,6,4,15,32:727,0,117,126,478,1073:-56.2243,-35.1178,-276.122,-86.9294,-285.152,-336.979,-79.0333,-277.254,-329.08,-327.274,-77.3443,-275.568,-327.395,-319.495,-326.191,-48.4296,-246.658,-298.484,-290.584,-288.899,-293.968,0,-198.242,-250.067,-242.168,-240.483,-211.571,-240.434 0|1:210:90,44,0,14,14,15,20:90:2656:44,0,14,14,15,20:1019,0,464,427,462,681:-45.1609,0,-198.655,-72.2536,-211.9,-284.171,-34.9311,-174.582,-246.853,-242.638,-39.8552,-179.505,-251.774,-214.455,-247.56,-35.195,-174.846,-247.115,-209.796,-214.718,-242.6,-18.5311,-158.185,-230.455,-193.135,-198.057,-193.398,-224.434 0|1:371:169,122,28,7,1,11,30:169:5029:122,28,7,1,11,30:3652,717,219,24,347,1019:-228.561,0,-364.937,-223.348,-345.574,-616.581,-261.896,-384.123,-607.471,-661.454,-277.582,-399.808,-623.155,-661.707,-678.945,-251.524,-373.751,-597.098,-635.65,-651.335,-649.877,-196.78,-319.01,-542.359,-580.91,-596.595,-570.538,-589.418 0|1:279:163,70,0,2,0,6,36:163:4882:70,0,2,0,6,36:1934,0,49,0,185,1203:-95.8961,0,-369.155,-144.964,-390.227,-535.212,-141.167,-386.43,-531.415,-530.813,-144.964,-390.227,-535.212,-531.415,-535.212,-130.122,-375.387,-520.372,-516.574,-520.372,-518.566,-47.6307,-292.91,-437.895,-434.098,-437.895,-423.055,-427.058 dDocent_Contig_1151 36 . A T 249.419 . AB=0.196721;ABP=51.7438;AC=1;AF=0.0833333;AN=12;AO=21;CIGAR=1X;DP=431;DPB=431;DPRA=0.664865;EPP=48.6112;EPPR=891.143;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.761905;PAIREDR=0.968215;PAO=0;PQA=0;PQR=0;PRO=0;QA=849;QR=16308;RO=409;RPL=0;RPP=48.6112;RPPR=891.143;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=409;SRP=891.143;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:43,1:43:1667:1:41:0,-9.15075,-146.158 0/0:63:61,2:61:2433:2:81:0,-11.2792,-211.425 0/1:61:48,12:48:1930:12:482:-25.2597,0,-155.425 0/0:78:72,6:72:2875:6:245:0,-1.05087,-236.42 0/0:93:93,0:93:3721:0:0:0,-27.9958,-334.896 0/0:92:92,0:92:3682:0:0:0,-27.6948,-331.399 dDocent_Contig_1152 33 . C T 336.513 . AB=0.128319;ABP=274.195;AC=3;AF=0.25;AN=12;AO=29;CIGAR=1X;DP=353;DPB=353;DPRA=1.77953;EPP=65.983;EPPR=706.567;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1136;QR=13055;RO=324;RPL=0;RPP=65.983;RPPR=706.567;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=324;SRP=706.567;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:61:54,7:54:2159:7:261:-5.47368,0,-176.118 0/0:40:40,0:40:1626:0:0:0,-12.0412,-146.563 0/1:112:96,16:96:3864:16:636:-23.858,0,-314.029 0/1:53:47,6:47:1891:6:239:-5.92909,0,-154.435 0/0:49:49,0:49:1995:0:0:0,-14.7505,-179.73 0/0:38:38,0:38:1520:0:0:0,-11.4391,-137.044 dDocent_Contig_1153 55 . C T 1315.3 . AB=0.291209;ABP=71.9247;AC=2;AF=0.166667;AN=12;AO=57;CIGAR=1X;DP=537;DPB=537;DPRA=0.820339;EPP=126.784;EPPR=1040.97;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2224;QR=18926;RO=478;RPL=57;RPP=126.784;RPPR=1040.97;RPR=0;RUN=1;SAF=57;SAP=126.784;SAR=0;SRF=478;SRP=1040.97;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:86:72,14:72:2802:14:547:-23.6711,0,-226.397 0/0:116:114,0:114:4540:0:0:0,-34.3174,-408.453 0/1:96:57,39:57:2295:39:1526:-108.672,0,-177.811 0/0:60:56,4:56:2179:4:151:0,-4.10963,-182.33 0/0:97:97,0:97:3862:0:0:0,-29.1999,-347.588 0/0:82:82,0:82:3248:0:0:0,-24.6845,-292.387 dDocent_Contig_1154 113 . C A 218.33 . AB=0.205882;ABP=54.1038;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=778;DPB=778;DPRA=0.354009;EPP=42.0968;EPPR=1651.16;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=599;QR=25859;RO=759;RPL=0;RPP=42.0968;RPPR=1651.16;RPR=18;RUN=1;SAF=0;SAP=42.0968;SAR=18;SRF=0;SRP=1651.16;SRR=759;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:110:110,0:110:3802:0:0:0,-33.1133,-342.398 0/0:202:202,0:202:6925:0:0:0,-60.8081,-623.362 0/0:175:174,0:174:5863:0:0:0,-52.3792,-527.48 0/0:174:174,0:174:5914:0:0:0,-52.3792,-532.407 0/1:68:54,14:54:1821:14:470:-22.1518,0,-143.698 0/0:49:45,4:45:1534:4:129:0,-2.82164,-126.42 dDocent_Contig_1155 18 . T A 389.651 . AB=0.137931;ABP=234.16;AC=1;AF=0.0833333;AN=12;AO=45;CIGAR=1X;DP=1228;DPB=1228;DPRA=0.849573;EPP=100.727;EPPR=2567.52;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996613;PAO=0;PQA=0;PQR=0;PRO=0;QA=1806;QR=47070;RO=1181;RPL=0;RPP=100.727;RPPR=2567.52;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=1181;SRP=2567.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:173:165,8:165:6584:8:326:0,-22.3683,-562.563 0/0:249:243,6:243:9688:6:245:0,-52.527,-848.904 0/0:146:145,1:145:5835:1:41:0,-39.8558,-520.836 0/1:203:174,28:174:6924:28:1112:-39.2838,0,-561.762 0/0:234:234,0:234:9306:0:0:0,-70.441,-836.992 0/0:223:220,2:220:8733:2:82:0,-59.4584,-777.684 dDocent_Contig_1156 98 . N G 475.732 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=16;CIGAR=1X;DP=16;DPB=16;DPRA=0;EPP=37.7539;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=500;QR=0;RO=0;RPL=16;RPP=37.7539;RPPR=0;RPR=0;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:94:-8.77067,-0.90309,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:6:0,6:0:0:6:207:-18.9682,-1.80618,0 1/1:1:0,1:0:0:1:24:-2.39989,-0.30103,0 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 1/1:3:0,3:0:0:3:76:-7.09164,-0.90309,0 dDocent_Contig_1158 7 . T C 19883.2 . AB=0.0942029;ABP=2371.61;AC=5;AF=0.416667;AN=12;AO=156;CIGAR=2X3M;DP=1919;DPB=1919;DPRA=0;EPP=341.76;EPPR=1931.28;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.998874;PAO=0;PQA=0;PQR=0;PRO=0;QA=5978;QR=34085;RO=888;RPL=0;RPP=341.76;RPPR=1931.28;RPR=156;RUN=1;SAF=156;SAP=341.76;SAR=0;SRF=888;SRP=1931.28;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:295:201,20,16,36:201:7691:20,16,36:762,615,1384:-53.1162,-51.1186,-676.222,-63.1337,-631.753,-689.442,0,-568.62,-580.635,-620.288 0|1:477:237,83,86,60:237:9114:83,86,60:3202,3322,2294:-201.496,-9.88286,-733.137,0,-485.283,-722.351,-84.6037,-569.886,-560.003,-814.781 0|1:319:237,11,45,22:237:9108:11,45,22:422,1747,850:-72.2105,-108.916,-853.312,0,-713.073,-734.165,-73.7403,-786.81,-677.898,-814.825 0|1:308:166,12,110,16:166:6352:12,110,16:458,4226,596:-296.948,-309.345,-826.984,0,-483.681,-488.142,-298.134,-781.81,-472.47,-814.568 0|1:257:21,210,0,22:21:814:210,0,22:8053,0,854:-657.939,-3.29583,-6.95563,-664.26,-70.1719,-731.137,-594.088,0,-660.965,-654.342 0|0:263:26,227,0,0:26:1006:227,0,0:8749,0,0:-710.602,0,-14.3076,-718.429,-82.6414,-801.066,-718.429,-82.6414,-801.066,-801.066 dDocent_Contig_1159 19 . T G 52.0427 . AB=0.125;ABP=42.0968;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=234;DPB=234;DPRA=1.41379;EPP=31.2394;EPPR=482.906;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=520;QR=8820;RO=221;RPL=0;RPP=31.2394;RPPR=482.906;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=221;SRP=482.906;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:24,1:24:969:1:41:0,-3.43118,-83.4136 0/1:32:28,4:28:1121:4:164:-5.51694,0,-91.539 0/0:86:82,4:82:3286:4:164:0,-10.7387,-280.645 0/0:23:21,2:21:851:2:70:0,-0.276574,-70.2542 0/0:39:37,2:37:1443:2:81:0,-4.05444,-122.424 0/0:29:29,0:29:1150:0:0:0,-8.72987,-103.781 dDocent_Contig_1160 47 . C T 669.452 . AB=0.243697;ABP=70.9099;AC=3;AF=0.25;AN=12;AO=35;CIGAR=1X;DP=241;DPB=241;DPRA=0;EPP=79.0118;EPPR=445.991;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.428571;PAIREDR=0.519608;PAO=0;PQA=0;PQR=0;PRO=0;QA=1387;QR=8082;RO=204;RPL=0;RPP=79.0118;RPPR=445.991;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=204;SRP=445.991;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:43:35,7:35:1361:7:272:-11.796,0,-109.692 0/1:49:40,9:40:1570:9:359:-17.9223,0,-126.78 0/1:27:14,13:14:557:13:518:-38.8363,0,-42.3437 0/0:45:42,3:42:1671:3:116:0,-2.72936,-139.801 0/0:26:25,1:25:1003:1:40:0,-3.8311,-86.5717 0/0:51:48,2:48:1920:2:82:0,-7.67469,-165.222 dDocent_Contig_1161 138 . T C 55.8906 . AB=0.109827;ABP=231.768;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=1055;DPB=1055;DPRA=1.32283;EPP=46.4397;EPPR=2239.63;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995146;PAO=0;PQA=0;PQR=0;PRO=0;QA=670;QR=34480;RO=1030;RPL=0;RPP=46.4397;RPPR=2239.63;RPR=20;RUN=1;SAF=0;SAP=46.4397;SAR=20;SRF=0;SRP=2239.63;SRR=1030;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:151:150,0:150:5042:0:0:0,-45.1545,-453.837 0/1:173:152,19:152:5164:19:637:-5.90781,0,-413.184 0/0:165:165,0:165:5655:0:0:0,-49.6699,-509.093 0/0:196:195,0:195:6489:0:0:0,-58.7008,-584.079 0/0:123:122,0:122:3954:0:0:0,-36.7257,-355.996 0/0:247:246,1:246:8176:1:33:0,-71.0553,-732.616 dDocent_Contig_1162 1 . N G 113.51 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=114;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:73:-6.93007,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1168 27 . A G 515.137 . AB=0.111111;ABP=747.825;AC=1;AF=0.0833333;AN=12;AO=94;CIGAR=1X;DP=2939;DPB=2939;DPRA=1.15311;EPP=207.129;EPPR=6176.51;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999648;PAO=0;PQA=0;PQR=0;PRO=0;QA=3668;QR=112679;RO=2843;RPL=0;RPP=207.129;RPPR=6176.51;RPR=94;RUN=1;SAF=94;SAP=207.129;SAR=0;SRF=2843;SRP=6176.51;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:415:415,0:415:16358:0:0:0,-124.927,-1470.96 0/0:512:511,1:511:20159:1:40:0,-150.132,-1808.7 0/0:448:448,0:448:17882:0:0:0,-134.861,-1607.91 0/0:502:502,0:502:19988:0:0:0,-151.117,-1797.27 0/1:567:503,63:503:19871:63:2472:-51.8325,0,-1616 0/0:495:464,30:464:18421:30:1156:0,-44.5008,-1552.08 dDocent_Contig_1169 1 . N G 360.309 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=10;CIGAR=1X;DP=10;DPB=10;DPRA=0;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0.9;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=377;QR=0;RO=0;RPL=0;RPP=24.725;RPPR=0;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:156:-14.4171,-1.20412,0 1/1:3:0,3:0:0:3:111:-10.3538,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.64622,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:40:-3.99568,-0.30103,0 dDocent_Contig_1170 8 . G C 144.781 . AB=0.149254;ABP=74.6041;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=424;DPB=424;DPRA=0.934256;EPP=35.5824;EPPR=888.971;GTI=0;LEN=1;MEANALT=1;MQM=54.6;MQMR=59.5368;NS=6;NUMALT=1;ODDS=0;PAIRED=0.6;PAIREDR=0.889706;PAO=0;PQA=0;PQR=0;PRO=0;QA=579;QR=15674;RO=408;RPL=0;RPP=35.5824;RPPR=888.971;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=408;SRP=888.971;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:79:79,0:79:3017:0:0:0,-23.7814,-271.531 0/0:62:62,0:62:2368:0:0:0,-18.6639,-213.29 0/0:64:63,0:63:2432:0:0:0,-18.9649,-218.553 0/0:84:84,0:84:3221:0:0:0,-25.2865,-290.013 0/0:68:63,5:63:2431:5:193:0,-2.77124,-201.249 0/1:67:57,10:57:2205:10:386:-14.7968,0,-178.5 dDocent_Contig_1171 10 . T A 24379.8 . AB=0.420218;ABP=114.58;AC=6;AF=0.5;AN=12;AO=848;CIGAR=1X3M;DP=2018;DPB=2018;DPRA=0;EPP=1844.42;EPPR=2346.03;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.991745;PAIREDR=0.998146;PAO=0;PQA=0;PQR=0;PRO=0;QA=33606;QR=42968;RO=1079;RPL=0;RPP=1844.42;RPPR=2346.03;RPR=848;RUN=1;SAF=848;SAP=1844.42;SAR=0;SRF=1079;SRP=2346.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:318:206,0,112:206:8186:0,112:0,4457:-305.347,-367.359,-1041.27,0,-674.306,-640.591 0|1:339:174,0,163:174:6929:0,163:0,6426:-476.353,-528.732,-1099.27,0,-570.638,-521.571 0|1:491:330,0,161:330:13167:0,161:0,6426:-430.276,-529.616,-1613.97,0,-1084.76,-1036.29 0|1:365:216,0,148:216:8602:0,148:0,5867:-417.869,-482.892,-1191.19,0,-708.299,-663.746 0|1:242:63,52,127:63:2503:52,127:2057,5014:-393.575,-243.261,-433.664,0,-36.7794,-167.826 0|1:263:90,36,137:90:3581:36,137:1427,5416:-418.561,-328.198,-612.202,0,-177.386,-253.599 dDocent_Contig_1172 51 . T A 1897.83 . AB=0.195072;ABP=396.323;AC=1;AF=0.0833333;AN=12;AO=152;CIGAR=1X;DP=2765;DPB=2765;DPRA=0;EPP=333.074;EPPR=5674.9;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.986842;PAIREDR=0.99196;PAO=0;PQA=0;PQR=0;PRO=0;QA=5972;QR=103863;RO=2612;RPL=152;RPP=333.074;RPPR=5674.9;RPR=0;RUN=1;SAF=152;SAP=333.074;SAR=0;SRF=2612;SRP=5674.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:439:433,6:433:17194:6:234:0,-110.723,-1524.66 0/0:542:510,31:510:20236:31:1222:0,-52.7889,-1709.3 0/0:224:222,2:222:8848:2:82:0,-59.651,-788.011 0/1:487:392,95:392:15560:95:3741:-190.101,0,-1252.58 0/0:519:518,1:518:20652:1:31:0,-153.135,-1853.82 0/0:554:537,17:537:21373:17:662:0,-106.87,-1861.86 dDocent_Contig_1173 146 . A G 555.715 . AB=0.261364;ABP=46.5385;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1X;DP=316;DPB=316;DPRA=0.77193;EPP=52.9542;EPPR=639.252;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=913;QR=11555;RO=293;RPL=0;RPP=52.9542;RPPR=639.252;RPR=23;RUN=1;SAF=0;SAP=52.9542;SAR=23;SRF=0;SRP=639.252;SRR=293;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:58:58,0:58:2284:0:0:0,-17.4597,-205.723 0/0:50:50,0:50:1971:0:0:0,-15.0515,-177.59 0/0:58:58,0:58:2302:0:0:0,-17.4597,-207.346 0/0:62:62,0:62:2470:0:0:0,-18.6639,-222.445 0/1:40:23,17:23:899:17:669:-48.4957,0,-69.1744 0/1:48:42,6:42:1629:6:244:-7.88939,0,-132.4 dDocent_Contig_1174 16 . G T 53545.8 . AB=0.72115;ABP=993.225;AC=6;AF=0.5;AN=12;AO=1681;CIGAR=1X;DP=2331;DPB=2331;DPRA=0;EPP=3653.26;EPPR=1412.3;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0.992267;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=67390;QR=25558;RO=649;RPL=0;RPP=3653.26;RPPR=1412.3;RPR=1681;RUN=1;SAF=1681;SAP=3653.26;SAR=0;SRF=649;SRP=1412.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:384:87,296:87:3379:296:11935:-957.638,0,-188.575 0/1:483:103,380:103:4046:380:15269:-1227.57,0,-218.752 0/1:263:41,222:41:1620:222:8938:-724.677,0,-66.8661 0/1:393:111,282:111:4373:282:11375:-904.611,0,-275.223 0/1:479:228,251:228:8997:251:9968:-752.288,0,-665.059 0/1:329:79,250:79:3143:250:9905:-791.791,0,-183.914 dDocent_Contig_1175 13 . C T 739.401 . AB=0.10782;ABP=1130.54;AC=1;AF=0.0833333;AN=12;AO=292;CIGAR=1X;DP=5400;DPB=5400;DPRA=0;EPP=637.08;EPPR=11094.9;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999804;PAO=0;PQA=0;PQR=0;PRO=0;QA=11715;QR=205214;RO=5108;RPL=0;RPP=637.08;RPPR=11094.9;RPR=292;RUN=1;SAF=292;SAP=637.08;SAR=0;SRF=5108;SRP=11094.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:676:639,37:639:25557:37:1488:0,-69.3344,-2163.65 0/0:1020:957,63:957:38529:63:2546:0,-77.7886,-3234.56 0/0:644:609,35:609:24427:35:1406:0,-67.0694,-2069.38 0/1:844:753,91:753:30339:91:3648:-74.2589,0,-2473.53 0/0:1230:1224,6:1224:49071:6:239:0,-348.382,-4389.63 0/0:986:926,60:926:37291:60:2388:0,-81.751,-3137.48 dDocent_Contig_1176 22 . T G 3401 . AB=0.213049;ABP=540.127;AC=3;AF=0.25;AN=12;AO=168;CIGAR=1X;DP=1761;DPB=1761;DPRA=0.508652;EPP=367.818;EPPR=3459.99;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996859;PAO=0;PQA=0;PQR=0;PRO=0;QA=6631;QR=63471;RO=1592;RPL=0;RPP=367.818;RPPR=3459.99;RPR=168;RUN=1;SAF=168;SAP=367.818;SAR=0;SRF=1592;SRP=3459.99;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:184:130,54:130:5173:54:2144:-137.74,0,-410.049 0/1:408:355,52:355:14175:52:2036:-60.4927,0,-1151.76 0/0:122:117,5:117:4695:5:204:0,-17.9816,-403.71 0/1:159:105,54:105:4203:54:2124:-143.477,0,-330.36 0/0:497:497,0:497:19766:0:0:0,-149.612,-1777.3 0/0:391:388,3:388:15459:3:123:0,-106.238,-1378.66 dDocent_Contig_1177 18 . T C 80955.2 . AB=0.837752;ABP=937.386;AC=9;AF=0.75;AN=12;AO=2314;CIGAR=1X3M1X;DP=2605;DPB=2605;DPRA=0;EPP=5027.8;EPPR=189.757;GTI=0;LEN=1;MEANALT=3.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.999136;PAIREDR=0.988372;PAO=0;PQA=0;PQR=0;PRO=0;QA=92206;QR=3408;RO=86;RPL=0;RPP=5027.8;RPPR=189.757;RPR=2314;RUN=1;SAF=2314;SAP=5027.8;SAR=0;SRF=86;SRP=189.757;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:306:7,281,18:7:277:281,18:11210,723:-982.865,-61.7938,0,-925.401,-25.0142,-942.779 0|1:408:38,338,29:38:1521:338,29:13488,1161:-1099.38,0,-23.5493,-1015.19,-29.6586,-1131.75 1|0:154:4,129,20:4:149:129,20:5149,815:-477.978,-55.1181,-28.475,-411.945,0,-418.116 1|0:381:6,323,48:6:239:323,48:12886,1934:-1199.12,-139.722,-62.1694,-1041.53,0,-1046.76 1|1:535:19,495,20:19:746:495,20:19741,801:-1707.65,-87.6599,0,-1647.39,-83.0184,-1702.72 1|1:821:12,748,57:12:476:748,57:29732,2253:-2630.13,-185.989,0,-2448.36,-39.7782,-2470.38 dDocent_Contig_1178 107 . N G 306.175 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=14;CIGAR=1X;DP=14;DPB=14;DPRA=0;EPP=33.4109;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=316;QR=0;RO=0;RPL=0;RPP=33.4109;RPPR=0;RPR=14;RUN=1;SAF=0;SAP=33.4109;SAR=14;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:54:-5.12867,-0.60206,0 1/1:2:0,2:0:0:2:42:-3.9887,-0.60206,0 1/1:3:0,3:0:0:3:94:-8.77091,-0.90309,0 1/1:2:0,2:0:0:2:41:-3.89396,-0.60206,0 1/1:3:0,3:0:0:3:58:-5.41278,-0.90309,0 1/1:2:0,2:0:0:2:27:-2.56496,-0.60206,0 dDocent_Contig_1179 7 . T G 130.1 . AB=0.158537;ABP=86.0559;AC=1;AF=0.0833333;AN=12;AO=23;CIGAR=1X;DP=571;DPB=571;DPRA=1.73559;EPP=52.9542;EPPR=1190.81;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=32.9031;NS=6;NUMALT=1;ODDS=0;PAIRED=0.478261;PAIREDR=0.341865;PAO=0;PQA=0;PQR=0;PRO=0;QA=755;QR=20848;RO=547;RPL=0;RPP=52.9542;RPPR=1190.81;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=547;SRP=1190.81;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:58,0:58:2197:0:0:0,-17.4597,-132.653 0/0:124:122,2:122:4640:2:60:0,-31.6286,-226.62 0/0:94:88,6:88:3370:6:227:0,-7.50368,-189.184 0/0:73:72,1:72:2757:1:10:0,-20.9752,-141.942 0/1:82:69,13:69:2605:13:419:-13.3288,0,-136.904 0/0:139:138,1:138:5279:1:39:0,-37.9466,-282.998 dDocent_Contig_1180 12 . G C 568.177 . AB=0.103666;ABP=1082.24;AC=2;AF=0.166667;AN=12;AO=142;CIGAR=1X;DP=2234;DPB=2234;DPRA=1.36167;EPP=311.359;EPPR=4543.56;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5704;QR=83385;RO=2091;RPL=0;RPP=311.359;RPPR=4543.56;RPR=142;RUN=1;SAF=142;SAP=311.359;SAR=0;SRF=2091;SRP=4543.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:448:397,51:397:15816:51:2035:-48.4758,0,-1287.35 0/0:494:454,39:454:18135:39:1580:0,-6.30254,-1488.23 0/1:343:312,31:312:12463:31:1246:-9.15547,0,-1017.52 0/0:349:328,21:328:13025:21:843:0,-28.8751,-1095.14 0/0:318:318,0:318:12669:0:0:0,-95.7275,-1139.29 0/0:282:282,0:282:11277:0:0:0,-84.8905,-1014.13 dDocent_Contig_1181 23 . T C 2069.1 . AB=0.177531;ABP=654.226;AC=4;AF=0.333333;AN=12;AO=152;CIGAR=1X2M1X;DP=1130;DPB=1130;DPRA=0;EPP=94.4407;EPPR=2074.59;GTI=0;LEN=1;MEANALT=2.16667;MQM=45.8092;MQMR=59.3459;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.977987;PAO=0;PQA=0;PQR=0;PRO=0;QA=5865;QR=37954;RO=954;RPL=0;RPP=333.074;RPPR=2074.59;RPR=152;RUN=1;SAF=116;SAP=94.4407;SAR=36;SRF=954;SRP=2074.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:154:145,7:145:5749:7:273:0,-22.7188,-490.736 0|1:220:168,44:168:6693:44:1669:-73.9197,0,-534.892 0|1:164:121,43:121:4813:43:1693:-100.208,0,-383.72 0|1:181:154,25:154:6117:25:972:-28.4304,0,-496.185 0|1:156:133,16:133:5286:16:612:-6.75813,0,-423.949 0|0:255:233,17:233:9296:17:646:0,-21.0317,-768.251 dDocent_Contig_1182 7 . C T 5921.67 . AB=0.334286;ABP=169.978;AC=6;AF=0.5;AN=12;AO=234;CIGAR=1X;DP=700;DPB=700;DPRA=0;EPP=511.135;EPPR=1012.74;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8948;QR=17726;RO=465;RPL=0;RPP=511.135;RPPR=1012.74;RPR=234;RUN=1;SAF=234;SAP=511.135;SAR=0;SRF=465;SRP=1012.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:164:101,63:101:3845:63:2394:-166.305,0,-296.784 0/1:93:52,40:52:1973:40:1547:-111.416,0,-149.73 0/1:132:85,47:85:3245:47:1794:-121.975,0,-252.461 0/1:105:90,15:90:3464:15:577:-20.6648,0,-280.28 0/1:132:105,27:105:3989:27:1036:-53.8124,0,-319.374 0/1:74:32,42:32:1210:42:1600:-121.992,0,-86.9133 dDocent_Contig_1183 34 . T C 183.253 . AB=0.0985075;ABP=472.055;AC=1;AF=0.0833333;AN=12;AO=100;CIGAR=1X;DP=3628;DPB=3628;DPRA=1.20971;EPP=220.158;EPPR=7659.62;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.99;PAIREDR=0.999716;PAO=0;PQA=0;PQR=0;PRO=0;QA=4006;QR=140867;RO=3526;RPL=0;RPP=220.158;RPPR=7659.62;RPR=100;RUN=1;SAF=100;SAP=220.158;SAR=0;SRF=3526;SRP=7659.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:456:456,0:456:18204:0:0:0,-137.27,-1636.85 0/0:713:672,41:672:26868:41:1655:0,-65.4642,-2266.5 0/1:335:301,33:301:12030:33:1326:-18.644,0,-980.874 0/0:605:604,0:604:24086:0:0:0,-181.822,-2165.22 0/0:707:692,15:692:27697:15:581:0,-160.209,-2437.53 0/0:812:801,11:801:31982:11:444:0,-204.121,-2835.12 dDocent_Contig_1184 1 . N G 190.95 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=200;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:119:-11.0954,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_1185 31 . C G 3129.27 . AB=0.0946746;ABP=967.658;AC=1;AF=0.0833333;AN=12;AO=105;CIGAR=2M1X8M1X;DP=3531;DPB=3537;DPRA=1.17802;EPP=231.015;EPPR=6198.22;GTI=0;LEN=1;MEANALT=10;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.998598;PAO=0;PQA=0;PQR=0;PRO=0;QA=4141;QR=112300;RO=2853;RPL=0;RPP=231.015;RPPR=6198.22;RPR=105;RUN=1;SAF=105;SAP=231.015;SAR=0;SRF=2853;SRP=6198.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:424:298,0,0,16,90:298:11705:0,0,16,90:0,0,622,3574:-204.493,-294.2,-1256.9,-294.2,-1256.9,-1256.9,-243.096,-1205.79,-1205.79,-1200.97,0,-962.702,-962.702,-911.597,-935.609 0|0:672:538,0,0,38,61:538:21206:0,0,38,61:0,0,1535,2435:-38.5775,-200.532,-1945.19,-200.532,-1945.19,-1945.19,-73.9832,-1818.65,-1818.65,-1807.21,0,-1744.67,-1744.67,-1618.12,-1726.3 0|0:267:218,0,0,18,26:218:8603:0,0,18,26:0,0,726,1045:-20.4943,-86.1188,-793.976,-86.1188,-793.976,-793.976,-26.2717,-734.132,-734.132,-728.713,0,-707.862,-707.862,-648.017,-700.035 0|0:646:539,0,0,37,41:539:21198:0,0,37,41:0,0,1480,1628:0,-162.255,-1905.91,-162.255,-1905.91,-1905.91,-40.3518,-1784,-1784,-1772.87,-28.246,-1771.9,-1771.9,-1649.99,-1759.56 0|1:676:522,64,58,17,0:522:20539:64,58,17,0:2538,2154,677,0:-51.7677,0,-1670.28,-32.6487,-1513.28,-1704.72,-153.158,-1633.8,-1666.43,-1837.58,-208.905,-1689.54,-1722.18,-1842.69,-1898.44 0|0:846:738,41,26,31,0:738:29049:41,26,31,0:1603,990,1247,0:0,-90.3812,-2467.69,-140.956,-2398.83,-2522.77,-119.387,-2377.26,-2427.83,-2499.71,-222.16,-2480.03,-2530.6,-2509.04,-2611.8 dDocent_Contig_1186 209 . N G 151.241 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=156;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 1/1:2:0,2:0:0:2:75:-7.12034,-0.60206,0 dDocent_Contig_1187 15 . A G 5415.89 . AB=0.360806;ABP=94.8962;AC=6;AF=0.5;AN=12;AO=197;CIGAR=1X;DP=546;DPB=546;DPRA=0;EPP=430.79;EPPR=718.047;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.832487;PAIREDR=0.902579;PAO=0;PQA=0;PQR=0;PRO=0;QA=7871;QR=13949;RO=349;RPL=0;RPP=430.79;RPPR=760.854;RPR=197;RUN=1;SAF=197;SAP=430.79;SAR=0;SRF=344;SRP=718.047;SRR=5;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:85:51,34:51:2049:34:1380:-98.8611,0,-159.007 0/1:118:89,29:89:3552:29:1130:-66.4533,0,-284.199 0/1:65:38,27:38:1495:27:1091:-78.9078,0,-115.229 0/1:117:77,40:77:3082:40:1600:-109.016,0,-242.239 0/1:72:31,41:31:1235:41:1652:-127.232,0,-89.7492 0/1:89:63,26:63:2536:26:1018:-65.1162,0,-201.576 dDocent_Contig_1188 45 . C T 4182.76 . AB=0.445122;ABP=11.5903;AC=6;AF=0.5;AN=12;AO=146;CIGAR=1X;DP=328;DPB=328;DPRA=0;EPP=320.045;EPPR=398.218;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.527397;PAIREDR=0.549451;PAO=0;PQA=0;PQR=0;PRO=0;QA=5769;QR=7219;RO=182;RPL=0;RPP=320.045;RPPR=398.218;RPR=146;RUN=1;SAF=146;SAP=320.045;SAR=0;SRF=182;SRP=398.218;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:20,15:20:760:15:590:-42.8999,0,-58.1667 0/1:68:31,37:31:1247:37:1464:-111.538,0,-92.0288 0/1:52:28,24:28:1117:24:951:-70.2359,0,-85.1612 0/1:62:28,34:28:1118:34:1317:-100.133,0,-82.2411 0/1:47:32,15:32:1249:15:597:-39.9197,0,-98.5245 0/1:64:43,21:43:1728:21:850:-57.5463,0,-136.475 dDocent_Contig_1189 46 . A G 3219.5 . AB=0.0492754;ABP=611.784;AC=0;AF=0;AN=12;AO=17;CIGAR=5M1X8M;DP=594;DPB=464.571;DPRA=1.29213;EPP=39.9253;EPPR=895.67;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=5.55112e-17;PAIRED=0.705882;PAIREDR=0.900709;PAO=0;PQA=0;PQR=0;PRO=0;QA=676;QR=16567;RO=423;RPL=0;RPP=39.9253;RPPR=895.67;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=423;SRP=921.543;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:90:78,11,0:78:3061:11,0:408,0:-9.87619,0,-248.424,-33.3565,-251.735,-285.116 0|0:103:74,25,4:74:2905:25,4:854,164:-46.9487,0,-231.375,-55.6792,-225.364,-293.431 0|0:70:56,14,0:56:2182:14,0:495,0:-23.7974,0,-175.512,-40.6551,-179.726,-220.021 0|0:89:82,7,0:82:3223:7,0:255,0:0,-3.49558,-266.881,-24.6845,-268.988,-289.811 0|0:108:50,53,4:50:1966:53,4:1993,161:-148.188,0,-145.752,-149.969,-148.437,-310.487 0|0:134:83,40,9:83:3230:40,9:1483,351:-96.3415,0,-253.421,-92.4757,-236.615,-355.222 dDocent_Contig_1190 107 . N T 6198.22 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=197;CIGAR=1X;DP=197;DPB=197;DPRA=0;EPP=430.79;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6858;QR=0;RO=0;RPL=0;RPP=430.79;RPPR=0;RPR=197;RUN=1;SAF=0;SAP=430.79;SAR=197;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:6:0,6:0:0:6:207:-18.9674,-1.80618,0 1/1:41:0,41:0:0:41:1445:-130.347,-12.3422,0 1/1:13:0,13:0:0:13:449:-40.7375,-3.91339,0 1/1:26:0,26:0:0:26:892:-80.5913,-7.82678,0 1/1:58:0,58:0:0:58:2044:-184.234,-17.4597,0 1/1:53:0,53:0:0:53:1821:-164.166,-15.9546,0 dDocent_Contig_1191 85 . A G 189.159 . AB=0.583333;ABP=3.73412;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=282;DPB=282;DPRA=0.222222;EPP=18.2106;EPPR=597.994;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=250;QR=9418;RO=274;RPL=7;RPP=18.2106;RPPR=597.994;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=274;SRP=597.994;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:45:45,0:45:1537:0:0:0,-13.5463,-138.624 0/0:116:116,0:116:3971:0:0:0,-34.9195,-357.606 0/0:27:27,0:27:933:0:0:0,-8.12781,-84.281 0/0:77:76,0:76:2629:0:0:0,-22.8783,-236.788 0/0:5:5,0:5:175:0:0:0,-1.50515,-16.0937 0/1:12:5,7:5:173:7:250:-19.2343,0,-12.2976 dDocent_Contig_1192 75 . C A 1374.06 . AB=0.269058;ABP=106.316;AC=2;AF=0.166667;AN=12;AO=61;CIGAR=1X;DP=408;DPB=408;DPRA=2.06767;EPP=135.47;EPPR=756.511;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2283;QR=12844;RO=347;RPL=61;RPP=135.47;RPPR=756.511;RPR=0;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=347;SRP=756.511;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:92:74,18:74:2665:18:658:-31.8584,0,-212.384 0/0:59:59,0:59:2148:0:0:0,-17.7608,-193.578 0/1:131:89,42:89:3404:42:1617:-106.361,0,-267.052 0/0:66:66,0:66:2496:0:0:0,-19.868,-224.842 0/0:52:51,1:51:1845:1:8:0,-14.8536,-165.519 0/0:8:8,0:8:286:0:0:0,-2.40824,-26.0755 dDocent_Contig_1193 11 . T A 386.489 . AB=0.253968;ABP=36.1339;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=377;DPB=377;DPRA=1.016;EPP=39.9253;EPPR=784.74;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.908333;PAO=0;PQA=0;PQR=0;PRO=0;QA=681;QR=14439;RO=360;RPL=0;RPP=39.9253;RPPR=784.74;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=360;SRP=784.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:52:52,0:52:2049:0:0:0,-15.6536,-184.593 0/0:45:45,0:45:1812:0:0:0,-13.5463,-163.29 0/0:103:103,0:103:4113:0:0:0,-31.0061,-370.123 0/0:50:50,0:50:2030:0:0:0,-15.0515,-182.879 0/0:64:63,1:63:2525:1:41:0,-15.1714,-223.293 0/1:63:47,16:47:1910:16:640:-38.9677,0,-153.127 dDocent_Contig_1194 28 . C T 270.523 . AB=0.255814;ABP=25.2805;AC=1;AF=0.0833333;AN=12;AO=21;CIGAR=1X;DP=974;DPB=974;DPRA=1.44024;EPP=48.6112;EPPR=2072.42;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=841;QR=38110;RO=953;RPL=0;RPP=48.6112;RPPR=2072.42;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=953;SRP=2072.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:150:145,5:145:5781:5:202:0,-26.5926,-501.526 0/0:302:298,4:298:11954:4:162:0,-75.9441,-1060.03 0/0:199:199,0:199:7920:0:0:0,-59.905,-712.352 0/0:228:227,1:227:9064:1:33:0,-65.3357,-811.902 0/0:52:52,0:52:2101:0:0:0,-15.6536,-189.267 0/1:43:32,11:32:1290:11:444:-27.3711,0,-103.414 dDocent_Contig_1195 25 . T C 145.504 . AB=0.163265;ABP=51.2702;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=255;DPB=255;DPRA=1.24658;EPP=31.2394;EPPR=528.507;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=521;QR=9646;RO=242;RPL=0;RPP=31.2394;RPPR=528.507;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=242;SRP=528.507;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:596:0:0:0,-4.51545,-53.9767 0/1:49:41,8:41:1644:8:325:-14.8692,0,-133.44 0/0:22:21,1:21:851:1:38:0,-2.82539,-73.104 0/0:45:43,2:43:1723:2:76:0,-6.33209,-148.077 0/0:66:64,2:64:2517:2:82:0,-12.0883,-218.89 0/0:58:58,0:58:2315:0:0:0,-17.4597,-208.511 dDocent_Contig_1196 18 . G C 21350 . AB=0.322749;ABP=681.965;AC=6;AF=0.5;AN=12;AO=803;CIGAR=1X2M1X3M;DP=2488;DPB=2487.86;DPRA=0;EPP=1746.7;EPPR=3195.07;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.967621;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=30982;QR=56319;RO=1470;RPL=0;RPP=1746.7;RPPR=3195.07;RPR=803;RUN=1;SAF=803;SAP=1746.7;SAR=0;SRF=1470;SRP=3195.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:365:216,1,140,0:216:8334:1,140,0:40,5368,0:-375.569,-437.297,-1121.38,0,-681.125,-642.276,-440.592,-1121.68,-684.42,-1124.97 0|1:557:289,0,248,0:289:11051:0,248,0:0,9574,0:-699.24,-786.237,-1692.98,0,-906.751,-832.095,-786.237,-1692.98,-906.751,-1692.98 0|1:336:213,0,97,20:213:8157:0,97,20:0,3759,792:-244.672,-308.792,-978.16,0,-669.364,-640.164,-243.619,-912.988,-604.192,-906.968 0|1:531:328,0,200,0:328:12578:0,200,0:0,7725,0:-535.714,-634.452,-1666.76,0,-1032.33,-972.127,-634.452,-1666.76,-1032.33,-1666.76 0|1:370:235,59,64,0:235:8963:59,64,0:2266,2459,0:-131.107,-15.844,-733.338,0,-549.25,-715.989,-201.849,-751.099,-735.255,-937.104 0|1:329:189,67,54,0:189:7236:67,54,0:2555,2097,0:-152.69,0,-573.614,-37.2864,-421.487,-614.817,-209.585,-593.783,-631.072,-803.368 dDocent_Contig_1197 74 . A G 1980.34 . AB=0.167376;ABP=680.513;AC=1;AF=0.0833333;AN=12;AO=118;CIGAR=1X;DP=3108;DPB=3108;DPRA=1.46692;EPP=259.244;EPPR=6491.37;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998996;PAO=0;PQA=0;PQR=0;PRO=0;QA=4562;QR=115346;RO=2988;RPL=118;RPP=259.244;RPPR=6491.37;RPR=0;RUN=1;SAF=118;SAP=259.244;SAR=0;SRF=2988;SRP=6491.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:547:547,0:547:21016:0:0:0,-164.663,-1890.06 0/0:502:501,0:501:19326:0:0:0,-150.816,-1737.81 0/0:327:327,0:327:12859:0:0:0,-98.4368,-1156.53 0/0:472:471,0:471:18172:0:0:0,-141.785,-1633.9 0/1:705:587,118:587:22555:118:4562:-198.353,0,-1816.18 0/0:555:555,0:555:21418:0:0:0,-167.072,-1926.16 dDocent_Contig_1198 14 . C T 46.2607 . AB=0.0989011;ABP=130.173;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=655;DPB=655;DPRA=0.949405;EPP=35.5824;EPPR=1392.75;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.990625;PAO=0;PQA=0;PQR=0;PRO=0;QA=596;QR=25264;RO=640;RPL=0;RPP=35.5824;RPPR=1392.75;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=640;SRP=1392.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:91:82,9:82:3227:9:352:-4.64379,0,-263.113 0/0:133:131,2:131:5180:2:81:0,-32.3513,-458.402 0/0:95:91,4:91:3574:4:163:0,-13.5394,-306.639 0/0:106:106,0:106:4178:0:0:0,-31.9092,-375.999 0/0:116:116,0:116:4624:0:0:0,-34.9195,-416.098 0/0:114:114,0:114:4481:0:0:0,-34.3174,-403.244 dDocent_Contig_1199 32 . C T 691.785 . AB=0.190217;ABP=156.382;AC=2;AF=0.166667;AN=12;AO=40;CIGAR=1X;DP=451;DPB=451;DPRA=0.983553;EPP=89.8692;EPPR=895.485;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.975;PAIREDR=0.885645;PAO=0;PQA=0;PQR=0;PRO=0;QA=1589;QR=16520;RO=411;RPL=0;RPP=89.8692;RPPR=895.485;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=411;SRP=895.485;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:42,2:42:1687:2:82:0,-5.46564,-144.273 0/1:115:88,27:88:3535:27:1075:-62.4115,0,-283.558 0/0:71:68,3:68:2734:3:121:0,-10.0931,-234.888 0/1:69:61,8:61:2456:8:311:-7.5806,0,-200.407 0/0:69:69,0:69:2769:0:0:0,-20.7711,-249.314 0/0:83:83,0:83:3339:0:0:0,-24.9855,-300.552 dDocent_Contig_1200 12 . G T 1762.64 . AB=0.192478;ABP=374.294;AC=3;AF=0.25;AN=12;AO=87;CIGAR=1X;DP=806;DPB=806;DPRA=1.27684;EPP=191.928;EPPR=1564.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.988506;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3473;QR=28669;RO=719;RPL=0;RPP=191.928;RPPR=1564.3;RPR=87;RUN=1;SAF=87;SAP=191.928;SAR=0;SRF=719;SRP=1564.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:159:146,13:146:5813:13:531:-0.272605,0,-475.119 0/1:229:164,65:164:6554:65:2590:-164.288,0,-520.635 0/0:92:92,0:92:3674:0:0:0,-27.6948,-330.666 0/1:64:55,9:55:2198:9:352:-12.7682,0,-178.722 0/0:120:120,0:120:4783:0:0:0,-36.1236,-430.374 0/0:142:142,0:142:5647:0:0:0,-42.7463,-508.031 dDocent_Contig_1201 45 . A T 181.322 . AB=0.228571;ABP=25.4075;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=344;DPB=344;DPRA=1.47482;EPP=31.2394;EPPR=721.768;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=515;QR=12961;RO=331;RPL=0;RPP=31.2394;RPPR=721.768;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=331;SRP=721.768;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:771:0:0:0,-6.0206,-69.7078 0/0:78:76,2:76:2966:2:81:0,-15.7946,-259.361 0/1:35:27,8:27:1071:8:318:-18.4509,0,-86.1468 0/0:92:89,3:89:3481:3:116:0,-16.8785,-302.533 0/0:65:65,0:65:2536:0:0:0,-19.5669,-228.397 0/0:54:54,0:54:2136:0:0:0,-16.2556,-192.431 dDocent_Contig_1202 10 . T C 1374.82 . AB=0.15233;ABP=588.856;AC=1;AF=0.0833333;AN=12;AO=189;CIGAR=1X;DP=2919;DPB=2919;DPRA=0;EPP=413.419;EPPR=5801.56;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994139;PAO=0;PQA=0;PQR=0;PRO=0;QA=7557;QR=107583;RO=2730;RPL=0;RPP=413.419;RPPR=5931.13;RPR=189;RUN=1;SAF=189;SAP=413.419;SAR=0;SRF=2715;SRP=5801.56;SRR=15;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:355:351,4:351:13858:4:154:0,-92.6342,-1232.05 0/0:588:561,27:561:22194:27:1073:0,-80.1442,-1898.82 0/0:428:405,23:405:16031:23:932:0,-44.6581,-1357.41 0/0:454:440,14:440:17313:14:560:0,-85.9238,-1506.13 0/1:558:473,85:473:18544:85:3397:-137.801,0,-1499.58 0/0:536:500,36:500:19643:36:1441:0,-31.4135,-1636.43 dDocent_Contig_1203 1 . N G 77.9671 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.21888;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1205 19 . T C 434.375 . AB=0.112676;ABP=558.112;AC=1;AF=0.0833333;AN=12;AO=119;CIGAR=1X;DP=2353;DPB=2353;DPRA=0;EPP=261.416;EPPR=4851.91;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.995074;PAO=0;PQA=0;PQR=0;PRO=0;QA=4755;QR=88980;RO=2233;RPL=0;RPP=261.416;RPPR=4851.91;RPR=119;RUN=1;SAF=119;SAP=261.416;SAR=0;SRF=2233;SRP=4851.91;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:342:336,6:336:13350:6:240:0,-80.9768,-1178.59 0/0:444:427,16:427:16972:16:650:0,-74.9322,-1467.32 0/0:203:195,8:195:7748:8:325:0,-31.4895,-667.316 0/1:426:378,48:378:15085:48:1909:-43.7562,0,-1228.23 0/0:504:488,16:488:19490:16:632:0,-94.5089,-1695.27 0/0:434:409,25:409:16335:25:999:0,-40.4407,-1378.66 dDocent_Contig_1206 93 . C A 5183.5 . AB=0.14585;ABP=4006.56;AC=5;AF=0.416667;AN=12;AO=592;CIGAR=1X;DP=4558;DPB=4558;DPRA=0;EPP=1288.52;EPPR=8612.9;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=19867;QR=124193;RO=3965;RPL=592;RPP=1288.52;RPPR=8612.9;RPR=0;RUN=1;SAF=592;SAP=1288.52;SAR=0;SRF=3965;SRP=8612.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:660:546,114:546:16943:114:3854:-148.398,0,-1326.12 0/0:883:827,56:827:25788:56:1795:0,-103.993,-2158.79 0/1:551:493,58:493:15454:58:1990:-13.5116,0,-1224.92 0/1:571:460,111:460:14343:111:3694:-160.791,0,-1118.96 0/1:1042:891,151:891:28051:151:5100:-145.509,0,-2210.56 0/1:851:748,102:748:23614:102:3434:-53.3414,0,-1869.05 dDocent_Contig_1207 27 . T C 652.632 . AB=0.205479;ABP=113.012;AC=1;AF=0.0833333;AN=12;AO=55;CIGAR=1X;DP=710;DPB=710;DPRA=2.09032;EPP=122.441;EPPR=1423.15;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.986239;PAO=0;PQA=0;PQR=0;PRO=0;QA=2190;QR=26046;RO=654;RPL=0;RPP=122.441;RPPR=1423.15;RPR=55;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=654;SRP=1423.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:123:118,5:118:4725:5:190:0,-19.5659,-407.694 0/0:91:89,2:89:3531:2:77:0,-20.0855,-310.52 0/0:62:62,0:62:2512:0:0:0,-18.6639,-226.209 0/0:135:126,8:126:5021:8:312:0,-12.2957,-423.332 0/1:146:116,30:116:4564:30:1214:-65.5819,0,-366.734 0/0:153:143,10:143:5693:10:397:0,-9.97042,-476.089 dDocent_Contig_1208 94 . C T 31003.6 . AB=0.032147;ABP=1658.98;AC=0;AF=0;AN=12;AO=28;CIGAR=1X2M1I8M1X;DP=1877;DPB=2049.75;DPRA=1.01161;EPP=63.8115;EPPR=1080.06;GTI=0;LEN=1;MEANALT=9;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=1317.5;PRO=38.5;QA=961;QR=16904;RO=496;RPL=28;RPP=63.8115;RPPR=1080.06;RPR=0;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=496;SRP=1080.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:253:14,8,22,188,9:14:483:8,22,188,9:278,774,6316,310:-531.175,-512.787,-549.619,-472.383,-489.021,-505.001,-23.7652,-40.4004,0,-6.40744,-510.208,-526.846,-486.442,-37.8227,-546.739 0|0:306:19,17,52,195,16:19:622:17,52,195,16:578,1825,6601,536:-627.74,-586.575,-631.7,-484.931,-488.289,-519.52,-98.2876,-101.644,0,-89.8254,-590.053,-593.411,-491.767,-105.122,-635.479 0|0:287:20,0,15,236,10:20:670:0,15,236,10:0,538,8027,335:-661.871,-667.891,-722.15,-624.009,-678.268,-673.753,-16.8011,-71.0431,-27.1635,0,-640.762,-695.021,-651.139,-43.9196,-692.01 0|0:312:41,3,14,229,12:41:1398:3,14,229,12:105,500,7716,392:-612.905,-616.704,-729.236,-584.481,-689.373,-693.702,0,-104.886,-72.662,-44.4931,-593.592,-698.483,-666.26,-81.7761,-703.414 0|0:382:161,0,1,214,0:161:5476:0,1,214,0:0,35,7214,0:-536.207,-584.673,-1028.88,-581.825,-1026.03,-1025.73,0,-444.274,-441.426,-379.853,-584.673,-1028.88,-1026.03,-444.274,-1028.88 0|0:337:241,0,7,75,0:241:8255:0,7,75,0:0,243,2543,0:-133.66,-206.208,-876.349,-186.453,-856.595,-854.488,0,-670.136,-650.382,-647.559,-206.208,-876.349,-856.595,-670.136,-876.349 dDocent_Contig_1209 79 . A C 73327.2 . AB=0.850838;ABP=1214.33;AC=10;AF=0.833333;AN=12;AO=2308;CIGAR=1X;DP=2525;DPB=2525;DPRA=0;EPP=5014.77;EPPR=467.705;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999567;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=87031;QR=8066;RO=214;RPL=2308;RPP=5014.77;RPPR=467.705;RPR=0;RUN=1;SAF=2308;SAP=5014.77;SAR=0;SRF=214;SRP=467.705;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:223:0,223:0:0:223:8129:-731.57,-67.1297,0 0/1:376:57,319:57:2094:319:11595:-930.148,0,-75.5342 1/1:238:10,228:10:388:228:8731:-750.255,-36.3673,0 1/1:352:9,342:9:327:342:13005:-1140.13,-76.1225,0 0/1:757:112,645:112:4266:645:24663:-1990.35,0,-156.137 1/1:579:26,551:26:991:551:20908:-1791.09,-84.4853,0 dDocent_Contig_1210 98 . N A 12700.9 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=418;CIGAR=1X;DP=420;DPB=420;DPRA=0;EPP=910.686;EPPR=0;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=14088;QR=0;RO=0;RPL=418;RPP=910.686;RPPR=0;RPR=0;RUN=1;SAF=418;SAP=910.686;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:103:0,103:0:0:103:3442:-310.009,-31.0061,0 1/1:133:0,133:0:0:133:4522:-407.175,-40.037,0 1/1:140:0,138:0:0:138:4674:-420.621,-41.5421,0 1/1:37:0,37:0:0:37:1230:-110.994,-11.1381,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:5:0,5:0:0:5:150:-13.7952,-1.50515,0 dDocent_Contig_1211 17 . A C 337.362 . AB=0.171429;ABP=101.471;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X;DP=305;DPB=305;DPRA=1.40625;EPP=50.7827;EPPR=617.537;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.727273;PAIREDR=0.904594;PAO=0;PQA=0;PQR=0;PRO=0;QA=891;QR=11221;RO=283;RPL=0;RPP=50.7827;RPPR=617.537;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=283;SRP=617.537;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:63:60,3:60:2350:3:123:0,-7.5001,-200.196 0/1:65:56,9:56:2210:9:365:-13.6479,0,-179.504 0/1:40:31,9:31:1224:9:362:-20.9019,0,-98.3918 0/0:57:56,1:56:2237:1:41:0,-13.0641,-197.407 0/0:39:39,0:39:1546:0:0:0,-11.7402,-139.378 0/0:41:41,0:41:1654:0:0:0,-12.3422,-149.087 dDocent_Contig_1212 94 . A G 962.181 . AB=0.428571;ABP=4.56135;AC=3;AF=0.5;AN=6;AO=15;CIGAR=1X3M3X;DP=35;DPB=35.1429;DPRA=0;EPP=35.5824;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=0;NS=3;NUMALT=2;ODDS=0;PAIRED=0.866667;PAIREDR=0;PAO=0;PQA=0;PQR=17;PRO=0.5;QA=510;QR=0;RO=0;RPL=15;RPP=35.5824;RPPR=0;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:17:0,10,7:0:0:10,7:340,243:-47.6773,-20.1017,-17.0914,-27.9197,0,-25.8125 1|0:8:0,2,6:0:0:2,6:68,208:-22.7678,-17.2535,-16.6514,-5.85587,0,-4.04969 .:.:.:.:.:.:.:. 1|0:10:0,3,7:0:0:3,7:102,236:-27.6834,-19.4111,-18.5081,-8.57375,0,-6.46654 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_1213 108 . G A 132.944 . AB=0.15942;ABP=72.5289;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=240;DPB=240;DPRA=0.807018;EPP=26.8965;EPPR=500.277;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.727273;PAIREDR=0.781659;PAO=0;PQA=0;PQR=0;PRO=0;QA=380;QR=7654;RO=229;RPL=0;RPP=26.8965;RPPR=500.277;RPR=11;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=500.277;SRR=229;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:49:49,0:49:1626:0:0:0,-14.7505,-146.623 0/0:52:52,0:52:1768:0:0:0,-15.6536,-159.406 0/0:32:32,0:32:1069:0:0:0,-9.63296,-96.5126 0/0:38:38,0:38:1251:0:0:0,-11.4391,-112.885 0/1:40:35,5:35:1184:5:175:-4.0525,0,-94.8209 0/1:29:23,6:23:756:6:205:-10.0555,0,-59.6175 dDocent_Contig_1214 8 . G T 369.137 . AB=0.167939;ABP=128.475;AC=3;AF=0.25;AN=12;AO=24;CIGAR=1X;DP=318;DPB=318;DPRA=0.585185;EPP=55.1256;EPPR=641.423;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.958333;PAIREDR=0.982993;PAO=0;PQA=0;PQR=0;PRO=0;QA=930;QR=11297;RO=294;RPL=0;RPP=55.1256;RPPR=641.423;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=294;SRP=641.423;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:24,8:24:918:8:310:-18.6307,0,-73.3022 0/1:57:50,7:50:1929:7:272:-7.68852,0,-156.693 0/0:62:61,1:61:2343:1:37:0,-14.966,-207.382 0/1:42:35,7:35:1336:7:272:-12.204,0,-107.883 0/0:44:43,1:43:1647:1:39:0,-9.34875,-144.597 0/0:81:81,0:81:3124:0:0:0,-24.3834,-281.313 dDocent_Contig_1215 29 . C A 1308.61 . AB=0.133423;ABP=869.071;AC=1;AF=0.0833333;AN=12;AO=312;CIGAR=1X;DP=5638;DPB=5638;DPRA=0.778819;EPP=680.51;EPPR=11555.2;GTI=0;LEN=1;MEANALT=1.6;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=12419;QR=212686;RO=5320;RPL=0;RPP=680.51;RPPR=11555.2;RPR=312;RUN=1;SAF=312;SAP=680.51;SAR=0;SRF=5320;SRP=11555.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:742:643,99:643:25537:99:3936:-130.879,0,-2072.79 0/0:1078:1011,66:1011:40519:66:2620:0,-88.6876,-3406.92 0/0:801:747,53:747:29794:53:2119:0,-50.3128,-2487.87 0/0:868:814,54:814:32488:54:2173:0,-65.5537,-2725.25 0/0:1152:1149,0:1149:46132:0:0:0,-345.883,-4147 0/0:997:956,40:956:38216:40:1571:0,-158.604,-3294.29 dDocent_Contig_1216 51 . C G 49.4518 . AB=0.108434;ABP=113.546;AC=1;AF=0.0833333;AN=12;AO=26;CIGAR=1X;DP=498;DPB=498;DPRA=1.11688;EPP=59.4686;EPPR=1025.77;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.807692;PAIREDR=0.785563;PAO=0;PQA=0;PQR=0;PRO=0;QA=1010;QR=18699;RO=471;RPL=26;RPP=59.4686;RPPR=1025.77;RPR=0;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=471;SRP=1025.77;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:83:74,9:74:2947:9:329:-4.95749,0,-240.332 0/0:98:90,8:90:3567:8:320:0,-0.333845,-291.901 0/0:70:68,2:68:2711:2:78:0,-13.6688,-236.704 0/0:93:86,7:86:3403:7:283:0,-2.15329,-280.474 0/0:78:78,0:78:3095:0:0:0,-23.4803,-278.637 0/0:76:75,0:75:2976:0:0:0,-22.5772,-267.522 dDocent_Contig_1217 11 . C T 93.8883 . AB=0.132075;ABP=65.3275;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=393;DPB=393;DPRA=0.935961;EPP=26.8965;EPPR=832.513;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.181818;PAIREDR=0.701571;PAO=0;PQA=0;PQR=0;PRO=0;QA=429;QR=15321;RO=382;RPL=0;RPP=26.8965;RPPR=832.513;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=382;SRP=832.513;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:63:63,0:63:2541:0:0:0,-18.9649,-228.82 0/0:72:70,2:70:2782:2:72:0,-14.8389,-243.643 0/0:57:57,0:57:2265:0:0:0,-17.1587,-204.015 0/0:65:63,2:63:2543:2:76:0,-12.3527,-221.783 0/0:83:83,0:83:3348:0:0:0,-24.9855,-301.361 0/1:53:46,7:46:1842:7:281:-9.70759,0,-150.032 dDocent_Contig_1218 41 . T C 273.291 . AB=0.15534;ABP=109.286;AC=2;AF=0.166667;AN=12;AO=24;CIGAR=1X;DP=371;DPB=371;DPRA=1.52558;EPP=55.1256;EPPR=756.511;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.691643;PAO=0;PQA=0;PQR=0;PRO=0;QA=973;QR=13871;RO=347;RPL=0;RPP=55.1256;RPPR=756.511;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=347;SRP=756.511;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:43:43,0:43:1707:0:0:0,-12.9443,-153.856 0/0:96:90,6:90:3606:6:243:0,-6.65091,-302.312 0/1:59:48,11:48:1932:11:446:-22.7352,0,-156.313 0/1:44:39,5:39:1561:5:203:-5.40753,0,-127.481 0/0:53:52,1:52:2068:1:41:0,-11.86,-182.207 0/0:76:75,1:75:2997:1:40:0,-18.8826,-265.824 dDocent_Contig_1219 12 . C T 1989.64 . AB=0.193798;ABP=423.232;AC=3;AF=0.25;AN=12;AO=107;CIGAR=1X;DP=904;DPB=904;DPRA=0;EPP=235.358;EPPR=1731.5;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998744;PAO=0;PQA=0;PQR=0;PRO=0;QA=4228;QR=31536;RO=796;RPL=0;RPP=235.358;RPPR=1731.5;RPR=107;RUN=1;SAF=107;SAP=235.358;SAR=0;SRF=796;SRP=1731.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:178:177,1:177:7067:1:36:0,-49.9851,-632.102 0/0:157:153,3:153:6091:3:123:0,-35.9053,-536.494 0/1:226:200,26:200:7899:26:1030:-24.9549,0,-642.475 0/1:263:194,69:194:7643:69:2732:-166.834,0,-608.33 0/1:27:22,5:22:884:5:184:-8.7846,0,-71.7416 0/0:53:50,3:50:1952:3:123:0,-4.4898,-164.412 dDocent_Contig_1220 98 . N G 234.407 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=236;QR=0;RO=0;RPL=8;RPP=20.3821;RPPR=0;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:23:-2.29991,-0.30103,0 1/1:3:0,3:0:0:3:93:-8.67838,-0.90309,0 1/1:1:0,1:0:0:1:18:-1.79997,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:67:-6.36304,-0.60206,0 dDocent_Contig_1221 8 . G A 13231.1 . AB=0.472472;ABP=9.58558;AC=6;AF=0.5;AN=12;AO=472;CIGAR=1X;DP=999;DPB=999;DPRA=0;EPP=976.492;EPPR=740.277;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.913136;PAIREDR=0.73814;PAO=0;PQA=0;PQR=0;PRO=0;QA=18076;QR=19956;RO=527;RPL=0;RPP=1027.95;RPPR=1147.38;RPR=472;RUN=1;SAF=466;SAP=976.492;SAR=6;SRF=475;SRP=740.277;SRR=52;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:104:35,69:35:1294:69:2629:-205.499,0,-85.4417 0/1:153:72,81:72:2718:81:3087:-231.937,0,-198.753 0/1:101:53,48:53:1980:48:1857:-136.972,0,-148.036 0/1:134:69,65:69:2603:65:2492:-184.144,0,-194.131 0/1:307:193,114:193:7347:114:4382:-302.027,0,-568.676 0/1:200:105,95:105:4014:95:3629:-266.528,0,-301.15 dDocent_Contig_1222 41 . A C 198.862 . AB=0.0460526;ABP=819.198;AC=0;AF=0;AN=12;AO=97;CIGAR=4M1X2M;DP=2413;DPB=2406.14;DPRA=0;EPP=4.10723;EPPR=4875.79;GTI=0;LEN=1;MEANALT=4.66667;MQM=53.9794;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.484536;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3539;QR=86630;RO=2244;RPL=0;RPP=213.643;RPPR=4875.79;RPR=97;RUN=1;SAF=45;SAP=4.10723;SAR=52;SRF=2244;SRP=4875.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:312:284,0,20:284:10948:0,20:0,677:0,-85.4925,-984.487,-31.5729,-930.605,-924.584 0|0:461:444,0,14:444:17212:0,14:0,519:0,-133.657,-1547.65,-91.5479,-1505.52,-1501.3 0|0:357:347,0,8:347:13362:0,8:0,315:0,-104.457,-1201.46,-78.5568,-1175.55,-1173.15 0|0:386:365,0,19:365:14078:0,19:0,713:0,-109.876,-1265.88,-51.9135,-1207.99,-1202.27 0|0:456:389,43,21:389:15060:43,21:1671,776:-20.2049,0,-1224.13,-74.223,-1173.98,-1304.96 0|0:441:415,5,15:415:15970:5,15:197,539:0,-108.706,-1418.33,-81.1584,-1376.11,-1387.8 dDocent_Contig_1223 46 . T A 8630.62 . AB=0.631808;ABP=72.2751;AC=5;AF=0.416667;AN=12;AO=304;CIGAR=1X;DP=671;DPB=671;DPRA=0;EPP=663.138;EPPR=799.941;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11695;QR=14479;RO=367;RPL=0;RPP=663.138;RPPR=799.941;RPR=304;RUN=1;SAF=304;SAP=663.138;SAR=0;SRF=367;SRP=799.941;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:10,26:10:398:26:986:-78.2086,0,-25.3425 0/1:103:14,89:14:536:89:3411:-276.098,0,-17.5735 0/1:57:14,43:14:545:43:1676:-133.929,0,-32.2305 0/1:116:20,96:20:786:96:3715:-299.52,0,-36.1388 0/0:212:198,14:198:7827:14:546:0,-14.3337,-654.575 0/1:147:111,36:111:4387:36:1361:-78.5078,0,-350.527 dDocent_Contig_1224 49 . T C 515.719 . AB=0.327586;ABP=17.986;AC=1;AF=0.0833333;AN=12;AO=22;CIGAR=1X;DP=288;DPB=288;DPRA=1.18232;EPP=50.7827;EPPR=580.622;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.545455;PAIREDR=0.75188;PAO=0;PQA=0;PQR=0;PRO=0;QA=889;QR=10664;RO=266;RPL=0;RPP=50.7827;RPPR=580.622;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=266;SRP=580.622;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1209:0:0:0,-9.0309,-109.083 0/0:68:68,0:68:2733:0:0:0,-20.47,-246.083 0/0:39:39,0:39:1543:0:0:0,-11.7402,-139.105 0/0:44:44,0:44:1783:0:0:0,-13.2453,-160.677 0/1:58:39,19:39:1546:19:767:-51.8907,0,-121.919 0/0:49:46,3:46:1850:3:122:0,-3.37798,-155.329 dDocent_Contig_1225 60 . G C 57.6341 . AB=0.100917;ABP=153.798;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=739;DPB=739;DPRA=0.819643;EPP=35.5824;EPPR=1575.16;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.933333;PAIREDR=0.993094;PAO=0;PQA=0;PQR=0;PRO=0;QA=587;QR=27608;RO=724;RPL=15;RPP=35.5824;RPPR=1575.16;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=724;SRP=1575.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:109:98,11:98:3717:11:425:-5.78114,0,-301.783 0/0:146:144,2:144:5450:2:80:0,-36.3586,-482.823 0/0:72:71,1:71:2727:1:41:0,-17.5796,-241.479 0/0:132:131,1:131:5016:1:41:0,-35.6414,-447.291 0/0:141:141,0:141:5341:0:0:0,-42.4452,-480.628 0/0:139:139,0:139:5357:0:0:0,-41.8432,-482.052 dDocent_Contig_1226 23 . A G 12302.9 . AB=0.528716;ABP=7.25054;AC=7;AF=0.583333;AN=12;AO=394;CIGAR=1X;DP=673;DPB=673;DPRA=0;EPP=858.57;EPPR=608.851;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=15677;QR=11030;RO=279;RPL=0;RPP=858.57;RPPR=608.851;RPR=394;RUN=1;SAF=394;SAP=858.57;SAR=0;SRF=279;SRP=608.851;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:106:60,46:60:2364:46:1826:-132.643,0,-181.024 0/1:137:56,81:56:2190:81:3232:-249.7,0,-156.04 0/1:110:80,30:80:3199:30:1211:-76.1466,0,-254.87 0/1:96:48,48:48:1898:48:1893:-141.676,0,-142.134 0/1:143:35,108:35:1379:108:4315:-345.251,0,-81.3289 1/1:81:0,81:0:0:81:3200:-288.079,-24.3834,0 dDocent_Contig_1227 13 . A C 10180.5 . AB=0.444444;ABP=24.2425;AC=6;AF=0.5;AN=12;AO=352;CIGAR=1X1M1X;DP=792;DPB=792;DPRA=0;EPP=767.369;EPPR=956.287;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.994318;PAIREDR=0.997722;PAO=0;PQA=0;PQR=0;PRO=0;QA=13992;QR=17378;RO=439;RPL=0;RPP=767.369;RPPR=956.287;RPR=352;RUN=1;SAF=352;SAP=767.369;SAR=0;SRF=439;SRP=956.287;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:132:104,28:104:4113:28:1119:-61.2605,0,-330.431 0|1:202:125,77:125:4947:77:3057:-214.405,0,-384.34 0|1:133:102,31:102:4067:31:1227:-70.6653,0,-325.976 0|1:88:70,17:70:2746:17:674:-34.6822,0,-220.976 0|1:117:10,107:10:402:107:4255:-347.702,0,-1.31994 0|1:120:28,92:28:1103:92:3660:-293.307,0,-63.4324 dDocent_Contig_1229 1 . N G 270.026 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=276;QR=0;RO=0;RPL=0;RPP=18.2106;RPPR=0;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:37:-3.69783,-0.30103,0 1/1:2:0,2:0:0:2:75:-7.1201,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:123:-11.4648,-0.90309,0 dDocent_Contig_1230 9 . A T 33.3548 . AB=0.0970149;ABP=192.026;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=783;DPB=783;DPRA=1.08876;EPP=33.4109;EPPR=1655.5;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.978975;PAO=0;PQA=0;PQR=0;PRO=0;QA=524;QR=28860;RO=761;RPL=0;RPP=33.4109;RPPR=1655.5;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=761;SRP=1655.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:143:141,0:141:5336:0:0:0,-42.4452,-479.844 0/0:172:172,0:172:6512:0:0:0,-51.7772,-586.005 0/0:80:78,0:78:2976:0:0:0,-23.4803,-267.622 0/0:112:112,0:112:4237:0:0:0,-33.7154,-381.417 0/0:142:137,1:137:5206:1:39:0,-38.0258,-464.695 0/1:134:121,13:121:4593:13:485:-3.65404,0,-373.091 dDocent_Contig_1231 16 . G C 473.162 . AB=0.139918;ABP=276.678;AC=4;AF=0.333333;AN=12;AO=38;CIGAR=1X;DP=316;DPB=316;DPRA=0;EPP=85.5263;EPPR=606.68;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.736842;PAIREDR=0.81295;PAO=0;PQA=0;PQR=0;PRO=0;QA=1507;QR=10897;RO=278;RPL=0;RPP=85.5263;RPPR=606.68;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=278;SRP=606.68;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:23,2:23:882:2:77:0,-0.216608,-72.3806 0/0:48:46,2:46:1825:2:81:0,-6.76371,-156.787 0/1:49:41,8:41:1620:8:317:-14.145,0,-131.284 0/1:64:54,10:54:2090:10:395:-16.6415,0,-169.03 0/1:66:57,9:57:2233:9:363:-13.1665,0,-181.284 0/1:64:57,7:57:2247:7:274:-5.76164,0,-183.145 dDocent_Contig_1232 24 . A C 117.788 . AB=0.155556;ABP=49.3833;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=285;DPB=285;DPRA=0.984293;EPP=20.3821;EPPR=602.337;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.992754;PAO=0;PQA=0;PQR=0;PRO=0;QA=323;QR=10964;RO=276;RPL=0;RPP=20.3821;RPPR=602.337;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=276;SRP=602.337;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:32,0:32:1292:0:0:0,-9.63296,-116.545 0/1:45:37,7:37:1466:7:282:-12.0976,0,-118.535 0/0:60:60,0:60:2385:0:0:0,-18.0618,-214.8 0/0:42:42,0:42:1659:0:0:0,-12.6433,-149.536 0/0:57:57,0:57:2245:0:0:0,-17.1587,-202.225 0/0:49:48,1:48:1917:1:41:0,-10.6559,-168.626 dDocent_Contig_1233 29 . G C 1896.41 . AB=0.121495;ABP=1600.81;AC=2;AF=0.166667;AN=12;AO=232;CIGAR=6M1X4M;DP=3749;DPB=3736.82;DPRA=1.2789;EPP=506.792;EPPR=7299.16;GTI=0;LEN=1;MEANALT=6;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9200;QR=130297;RO=3360;RPL=0;RPP=506.792;RPPR=7299.16;RPR=232;RUN=1;SAF=232;SAP=506.792;SAR=0;SRF=3360;SRP=7299.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:617:546,28,41:546:21224:28,41:1087,1578:0,-75.0473,-1810.66,-34.8363,-1689.56,-1766.53 0|1:638:509,35,89:509:19755:35,89:1334,3546:-138.789,-182.609,-1795.16,0,-1513.7,-1596.32 0|0:534:484,14,33:484:18672:14,33:540,1330:0,-101.364,-1630.38,-36.0532,-1524.97,-1559.37 0|1:646:557,17,67:557:21535:17,67:660,2664:-51.6656,-165.112,-1928.72,0,-1714.52,-1748.58 0|0:807:789,11,2:789:30613:11,2:425,82:0,-202.623,-2714.42,-230.742,-2710.96,-2745.26 0|0:507:475,28,0:475:18498:28,0:1075,0:0,-54.6598,-1566.63,-142.989,-1575.06,-1663.29 dDocent_Contig_1234 9 . A C 64.3903 . AB=0.0982659;ABP=245.525;AC=1;AF=0.0833333;AN=12;AO=61;CIGAR=1X;DP=1603;DPB=1603;DPRA=0.736883;EPP=135.47;EPPR=3349.25;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99416;PAO=0;PQA=0;PQR=0;PRO=0;QA=2324;QR=57962;RO=1541;RPL=0;RPP=135.47;RPPR=3349.25;RPR=61;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=1541;SRP=3349.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:220:204,16:204:7688:16:619:0,-10.1766,-635.725 0/0:258:245,13:245:9071:13:499:0,-32.4081,-770.933 0/0:274:274,0:274:10402:0:0:0,-82.4822,-935.833 0/1:173:156,17:156:5882:17:650:-6.75779,0,-477.279 0/0:374:374,0:374:14098:0:0:0,-112.585,-1268.24 0/0:304:288,15:288:10821:15:556:0,-41.2335,-923.174 dDocent_Contig_1235 8 . G A 1738.23 . AB=0.197505;ABP=385.302;AC=4;AF=0.333333;AN=12;AO=95;CIGAR=1X;DP=905;DPB=905;DPRA=0.567217;EPP=209.3;EPPR=1761.9;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3553;QR=31031;RO=810;RPL=0;RPP=209.3;RPPR=1761.9;RPR=95;RUN=1;SAF=95;SAP=209.3;SAR=0;SRF=810;SRP=1761.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:143:111,32:111:4250:32:1187:-64.0716,0,-339.53 0/1:116:99,17:99:3795:17:636:-22.6485,0,-306.737 0/1:79:70,9:70:2680:9:344:-7.53636,0,-217.602 0/1:143:106,37:106:4065:37:1386:-81.9719,0,-322.889 0/0:245:245,0:245:9402:0:0:0,-73.7523,-845.87 0/0:179:179,0:179:6839:0:0:0,-53.8844,-615.396 dDocent_Contig_1236 36 . C T 18947.7 . AB=0.358974;ABP=225.336;AC=7;AF=0.583333;AN=12;AO=638;CIGAR=1X;DP=1463;DPB=1463;DPRA=0;EPP=1388.41;EPPR=1770.59;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=25372;QR=32276;RO=814;RPL=0;RPP=1388.41;RPPR=1770.59;RPR=638;RUN=1;SAF=638;SAP=1388.41;SAR=0;SRF=814;SRP=1770.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:194:157,37:157:6193:37:1472:-74.3282,0,-498.746 0/1:289:212,74:212:8358:74:2967:-180.657,0,-665.313 0/1:281:170,107:170:6780:107:4233:-297.149,0,-526.11 0/1:316:240,72:240:9559:72:2871:-164.179,0,-765.412 1/1:176:0,176:0:0:176:7001:-629.764,-52.9813,0 0/1:207:35,172:35:1386:172:6828:-551.897,0,-62.6818 dDocent_Contig_1237 47 . A C 200.395 . AB=0.0942308;ABP=746.673;AC=1;AF=0.0833333;AN=12;AO=63;CIGAR=1X;DP=2871;DPB=2871;DPRA=1.02754;EPP=139.813;EPPR=6091.82;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997504;PAO=0;PQA=0;PQR=0;PRO=0;QA=2522;QR=110448;RO=2804;RPL=0;RPP=139.813;RPPR=6091.82;RPR=63;RUN=1;SAF=63;SAP=139.813;SAR=0;SRF=2804;SRP=6091.82;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:352:351,0:351:13744:0:0:0,-105.662,-1235.61 0/1:520:469,49:469:18450:49:1961:-20.3582,0,-1502.73 0/0:555:547,8:547:21597:8:321:0,-137.814,-1912.71 0/0:380:374,6:374:14830:6:240:0,-92.4156,-1311.64 0/0:596:596,0:596:23469:0:0:0,-179.414,-2110.33 0/0:468:467,0:467:18358:0:0:0,-140.581,-1650.42 dDocent_Contig_1238 17 . G A 343.583 . AB=0.125;ABP=296.159;AC=2;AF=0.166667;AN=12;AO=31;CIGAR=1X;DP=1468;DPB=1468;DPRA=0.378404;EPP=70.3259;EPPR=3119.07;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9993;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997909;PAO=0;PQA=0;PQR=0;PRO=0;QA=1225;QR=56845;RO=1435;RPL=0;RPP=70.3259;RPPR=3119.07;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=1435;SRP=3119.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:141:140,0:140:5506:0:0:0,-42.1442,-494.981 0/1:135:116,19:116:4571:19:747:-26.9146,0,-370.685 0/1:105:94,11:94:3705:11:439:-8.25738,0,-301.856 0/0:163:162,1:162:6389:1:39:0,-45.1713,-570.855 0/0:423:423,0:423:16773:0:0:0,-127.336,-1508.25 0/0:501:500,0:500:19901:0:0:0,-150.515,-1789.05 dDocent_Contig_1239 12 . C T 352.373 . AB=0.325;ABP=13.6505;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=1165;DPB=1165;DPRA=0.83455;EPP=35.5824;EPPR=2500.2;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.997391;PAO=0;PQA=0;PQR=0;PRO=0;QA=606;QR=45918;RO=1150;RPL=0;RPP=35.5824;RPPR=2500.2;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=1150;SRP=2500.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:195:195,0:195:7735:0:0:0,-58.7008,-695.752 0/0:303:301,2:301:12000:2:81:0,-83.5264,-1071.46 0/0:233:233,0:233:9349:0:0:0,-70.14,-840.815 0/0:215:215,0:215:8573:0:0:0,-64.7214,-771.073 0/0:179:179,0:179:7196:0:0:0,-53.8844,-647.278 0/1:40:27,13:27:1065:13:525:-35.556,0,-84.0941 dDocent_Contig_1240 98 . N A 128.546 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=132;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:67:-6.36304,-0.60206,0 1/1:2:0,2:0:0:2:65:-6.17345,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1241 1 . N G 120.026 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0.333333;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=121;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 1/1:1:0,1:0:0:1:39:-3.89656,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1243 18 . A T 2572.34 . AB=0.360697;ABP=70.7689;AC=2;AF=0.166667;AN=12;AO=145;CIGAR=1X1M1X3M1D3M1X1M1X3M6D1M1X;DP=783;DPB=740.417;DPRA=2.11024;EPP=317.874;EPPR=1355.84;GTI=0;LEN=1;MEANALT=3;MQM=29.5172;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5627;QR=24259;RO=623;RPL=0;RPP=317.874;RPPR=1355.84;RPR=145;RUN=1;SAF=145;SAP=317.874;SAR=0;SRF=623;SRP=1355.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:150:147,0:147:5702:0:0:0,-44.2514,-512.898 0|1:280:191,87:191:7432:87:3356:-140.39,0,-584.773 0|1:122:62,58:62:2441:58:2271:-117.658,0,-183.339 0|0:126:122,0:122:4763:0:0:0,-36.7257,-428.403 0|0:66:63,0:63:2427:0:0:0,-18.9649,-218.272 0|0:39:38,0:38:1494:0:0:0,-11.4391,-134.624 dDocent_Contig_1244 44 . A T 6606.95 . AB=0.460606;ABP=9.68264;AC=6;AF=0.5;AN=12;AO=228;CIGAR=1X;DP=495;DPB=495;DPRA=0;EPP=498.106;EPPR=582.793;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.977528;PAO=0;PQA=0;PQR=0;PRO=0;QA=9025;QR=10567;RO=267;RPL=0;RPP=498.106;RPPR=582.793;RPR=228;RUN=1;SAF=228;SAP=498.106;SAR=0;SRF=267;SRP=582.793;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:58:33,25:33:1311:25:1003:-73.1068,0,-100.795 0/1:74:59,15:59:2342:15:604:-32.4223,0,-188.664 0/1:59:43,16:43:1694:16:623:-38.632,0,-134.926 0/1:80:45,35:45:1793:35:1398:-101.99,0,-137.506 0/1:91:47,44:47:1850:44:1731:-128.619,0,-139.325 0/1:133:40,93:40:1577:93:3666:-289.922,0,-102.127 dDocent_Contig_1245 150 . G A 283.087 . AB=0.174419;ABP=82.1933;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=208;DPB=208;DPRA=1.40984;EPP=35.5824;EPPR=422.104;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.733333;PAIREDR=0.787565;PAO=0;PQA=0;PQR=0;PRO=0;QA=603;QR=7642;RO=193;RPL=0;RPP=35.5824;RPPR=422.104;RPR=15;RUN=1;SAF=0;SAP=35.5824;SAR=15;SRF=0;SRP=422.104;SRR=193;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:962:0:0:0,-7.22472,-86.8804 0/0:33:33,0:33:1326:0:0:0,-9.93399,-119.601 0/0:34:34,0:34:1311:0:0:0,-10.235,-118.239 0/0:31:31,0:31:1208:0:0:0,-9.33193,-108.989 0/1:54:48,6:48:1916:6:242:-5.90191,0,-156.379 0/1:32:23,9:23:919:9:361:-23.2204,0,-73.3768 dDocent_Contig_1246 17 . T A 1793.18 . AB=0.111289;ABP=2467.71;AC=3;AF=0.25;AN=12;AO=312;CIGAR=1X;DP=3272;DPB=3272;DPRA=0;EPP=680.51;EPPR=6430.57;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=12356;QR=118114;RO=2960;RPL=0;RPP=680.51;RPPR=6430.57;RPR=312;RUN=1;SAF=312;SAP=680.51;SAR=0;SRF=2960;SRP=6430.57;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:241:229,12:229:9096:12:489:0,-28.1869,-773.75 0/1:426:375,51:375:15062:51:2026:-54.2965,0,-1226.13 0/0:242:224,18:224:8938:18:718:0,-7.90582,-738.93 0/1:379:339,40:339:13505:40:1551:-25.7313,0,-1100.35 0/1:1073:955,118:955:38192:118:4711:-100.899,0,-3110.64 0/0:911:838,73:838:33321:73:2861:0,-16.6317,-2738.23 dDocent_Contig_1247 107 . N T 4274.87 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=149;CIGAR=1X;DP=151;DPB=151;DPRA=0;EPP=326.56;EPPR=0;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4723;QR=0;RO=0;RPL=0;RPP=326.56;RPPR=0;RPR=149;RUN=1;SAF=0;SAP=326.56;SAR=149;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:14:0,14:0:0:14:462:-41.8958,-4.21442,0 1/1:30:0,30:0:0:30:837:-75.5865,-9.0309,0 1/1:65:0,65:0:0:65:2195:-197.814,-19.567,0 1/1:33:0,32:0:0:32:974:-87.8602,-9.63296,0 1/1:3:0,3:0:0:3:106:-9.88916,-0.90309,0 1/1:6:0,5:0:0:5:149:-13.5943,-1.50515,0 dDocent_Contig_1248 33 . C T 1693.11 . AB=0.188679;ABP=449.186;AC=2;AF=0.166667;AN=12;AO=111;CIGAR=1X;DP=1771;DPB=1771;DPRA=1.41735;EPP=244.044;EPPR=3605.48;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.648649;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4063;QR=65833;RO=1659;RPL=0;RPP=244.044;RPPR=3605.48;RPR=111;RUN=1;SAF=111;SAP=244.044;SAR=0;SRF=1659;SRP=3605.48;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:248:247,1:247:9682:1:38:0,-70.8582,-866.973 0/0:506:504,2:504:20032:2:73:0,-145.39,-1794.25 0/0:219:219,0:219:8733:0:0:0,-65.9256,-785.455 0/0:268:260,8:260:10324:8:297:0,-53.5967,-901.421 0/1:314:261,52:261:10422:52:1896:-76.5806,0,-842.981 0/1:216:168,48:168:6640:48:1759:-93.544,0,-532.29 dDocent_Contig_1249 25 . G A 170.586 . AB=0.0909091;ABP=866.467;AC=1;AF=0.0833333;AN=12;AO=88;CIGAR=1X;DP=3094;DPB=3094;DPRA=1.04237;EPP=194.1;EPPR=6530.46;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998337;PAO=0;PQA=0;PQR=0;PRO=0;QA=3510;QR=119628;RO=3006;RPL=0;RPP=194.1;RPPR=6530.46;RPR=88;RUN=1;SAF=88;SAP=194.1;SAR=0;SRF=3006;SRP=6530.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:429:423,6:423:16747:6:242:0,-106.985,-1483.76 0/0:495:488,7:488:19501:7:247:0,-126.448,-1730.88 0/0:510:510,0:510:20319:0:0:0,-153.525,-1827 0/0:493:493,0:493:19709:0:0:0,-148.408,-1772.12 0/1:594:540,54:540:21436:54:2178:-17.3774,0,-1748.61 0/0:573:552,21:552:21916:21:843:0,-96.3083,-1894.4 dDocent_Contig_1251 125 . A T 129.872 . AB=0.222222;ABP=21.1059;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=228;DPB=228;DPRA=0.841176;EPP=31.2394;EPPR=469.877;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.538462;PAIREDR=0.734884;PAO=0;PQA=0;PQR=0;PRO=0;QA=507;QR=8629;RO=215;RPL=0;RPP=31.2394;RPPR=469.877;RPR=13;RUN=1;SAF=0;SAP=31.2394;SAR=13;SRF=0;SRP=469.877;SRR=215;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:28,1:28:1103:1:39:0,-4.83331,-95.6607 0/0:42:42,0:42:1701:0:0:0,-12.6433,-153.308 0/0:50:46,4:46:1845:4:156:0,-0.634211,-151.839 0/1:27:21,6:21:846:6:234:-13.3033,0,-68.325 0/0:37:35,2:35:1394:2:78:0,-3.73464,-118.308 0/0:43:43,0:43:1740:0:0:0,-12.9443,-156.812 dDocent_Contig_1252 30 . C A 1065.3 . AB=0.205645;ABP=189.652;AC=5;AF=0.416667;AN=12;AO=51;CIGAR=1X;DP=257;DPB=257;DPRA=5.51111;EPP=113.755;EPPR=450.334;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2029;QR=8156;RO=206;RPL=0;RPP=113.755;RPPR=450.334;RPR=51;RUN=1;SAF=51;SAP=113.755;SAR=0;SRF=206;SRP=450.334;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:76:62,14:62:2457:14:567:-28.4936,0,-198.399 0/1:50:45,5:45:1804:5:194:-2.77901,0,-147.521 0/1:51:40,11:40:1590:11:440:-24.6031,0,-127.979 0/1:50:37,13:37:1459:13:515:-31.6443,0,-116.512 0/1:21:13,8:13:479:8:313:-22.2104,0,-37.1115 0/0:9:9,0:9:367:0:0:0,-2.70927,-33.3953 dDocent_Contig_1253 39 . T C 6877.31 . AB=0.157975;ABP=2652.95;AC=3;AF=0.25;AN=12;AO=501;CIGAR=1X;DP=4594;DPB=4594;DPRA=0;EPP=1090.92;EPPR=8871.3;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999755;PAO=0;PQA=0;PQR=0;PRO=0;QA=19828;QR=140396;RO=4084;RPL=0;RPP=1090.92;RPPR=8871.3;RPR=501;RUN=1;SAF=501;SAP=1090.92;SAR=0;SRF=4084;SRP=8871.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:582:549,31:549:18892:31:1234:0,-63.3657,-1588.5 0/1:872:744,128:744:25523:128:5145:-200.405,0,-2033.82 0/0:644:631,12:631:21513:12:375:0,-159.642,-1901.61 0/0:760:711,46:711:24532:46:1838:0,-62.453,-2041.54 0/1:956:767,187:767:26348:187:7392:-377.653,0,-2083.24 0/1:780:682,97:682:23588:97:3844:-111.283,0,-1887.53 dDocent_Contig_1254 74 . C T 451.621 . AB=0.157068;ABP=198.113;AC=3;AF=0.25;AN=12;AO=41;CIGAR=1X;DP=463;DPB=463;DPRA=0;EPP=92.0407;EPPR=919.372;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.804878;PAIREDR=0.838863;PAO=0;PQA=0;PQR=0;PRO=0;QA=1571;QR=16316;RO=422;RPL=41;RPP=92.0407;RPPR=919.372;RPR=0;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=422;SRP=919.372;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:46:39,7:39:1473:7:270:-10.8179,0,-118.99 0/0:95:92,3:92:3467:3:116:0,-17.7801,-301.352 0/0:76:71,5:71:2800:5:190:0,-5.41648,-234.649 0/0:101:98,3:98:3791:3:118:0,-19.4013,-330.223 0/1:57:47,10:47:1827:10:365:-16.0202,0,-147.488 0/1:88:75,13:75:2958:13:512:-19.9335,0,-239.841 dDocent_Contig_1255 31 . C A 1349.34 . AB=0.263889;ABP=107.603;AC=5;AF=0.416667;AN=12;AO=60;CIGAR=1X;DP=253;DPB=253;DPRA=0;EPP=133.299;EPPR=422.104;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.984456;PAO=0;PQA=0;PQR=0;PRO=0;QA=2347;QR=7574;RO=193;RPL=0;RPP=133.299;RPPR=422.104;RPR=60;RUN=1;SAF=60;SAP=133.299;SAR=0;SRF=193;SRP=422.104;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:26,10:26:1021:10:379:-23.625,0,-81.3533 0/0:37:34,3:34:1341:3:114:0,-0.507192,-110.325 0/1:20:18,2:18:713:2:67:-0.341479,0,-58.475 0/1:77:57,20:57:2232:20:789:-48.1528,0,-177.89 0/1:36:23,13:23:886:13:516:-35.9508,0,-69.2135 0/1:47:35,12:35:1381:12:482:-29.5828,0,-110.412 dDocent_Contig_1256 28 . A G 1270.61 . AB=0.188366;ABP=307.528;AC=2;AF=0.166667;AN=12;AO=71;CIGAR=2X;DP=390;DPB=390;DPRA=0;EPP=157.185;EPPR=461.191;GTI=0;LEN=1;MEANALT=2.16667;MQM=15.8169;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.649289;PAO=0;PQA=0;PQR=0;PRO=0;QA=2429;QR=8305;RO=211;RPL=0;RPP=157.185;RPPR=461.191;RPR=71;RUN=1;SAF=0;SAP=157.185;SAR=71;SRF=211;SRP=461.191;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:29:23,3,3:23:898:3,3:101,90:0,-3.54594,-76.6316,-2.48489,-73.137,-75.604 0|0:66:45,7,14:45:1740:7,14:243,484:-3.64836,-9.26122,-150.22,0,-135.191,-138.883 0|0:61:44,5,12:44:1756:5,12:175,404:-3.74604,-11.3295,-154.603,0,-139.184,-141.218 0|0:124:47,11,66:47:1846:11,66:379,2251:-88.4326,-90.5683,-239.162,0,-140.045,-132.152 0|1:49:26,15,8:26:1023:15,8:504,272:-8.35149,0,-79.8028,-6.26363,-74.462,-88.1559 0|1:61:26,30,4:26:1042:30,4:1027,130:-26.0833,0,-76.9454,-27.6705,-79.7662,-112.419 dDocent_Contig_1257 98 . N G 106.253 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=6;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=111;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:53:-5.03367,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:5:0,4:0:0:4:58:-5.27984,-1.20412,0 dDocent_Contig_1258 22 . C T 297.051 . AB=0.111111;ABP=381.329;AC=2;AF=0.166667;AN=12;AO=55;CIGAR=1X;DP=678;DPB=678;DPRA=0;EPP=122.441;EPPR=1351.49;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.563636;PAIREDR=0.592593;PAO=0;PQA=0;PQR=0;PRO=0;QA=2201;QR=24992;RO=621;RPL=0;RPP=122.441;RPPR=1351.49;RPR=55;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=621;SRP=1351.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:117:109,7:109:4365:7:286:0,-8.94317,-366.694 0/1:147:130,17:130:5246:17:683:-17.5468,0,-427.715 0/0:81:75,6:75:3011:6:216:0,-4.60833,-251.289 0/1:141:126,15:126:5076:15:612:-12.9719,0,-414.246 0/0:85:83,2:83:3359:2:82:0,-17.8079,-294.564 0/0:107:98,8:98:3935:8:322:0,-2.88151,-324.781 dDocent_Contig_1259 16 . T C 9320.09 . AB=0.413924;ABP=53.8502;AC=5;AF=0.416667;AN=12;AO=336;CIGAR=1X;DP=899;DPB=899;DPRA=0;EPP=732.625;EPPR=1221.21;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13379;QR=22413;RO=561;RPL=0;RPP=732.625;RPPR=1221.21;RPR=336;RUN=1;SAF=336;SAP=732.625;SAR=0;SRF=561;SRP=1221.21;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:109:98,9:98:3896:9:353:0,-0.486332,-318.509 0/1:156:116,40:116:4612:40:1602:-97.4577,0,-368.047 0/1:87:76,11:76:3055:11:440:-13.7638,0,-248.839 0/1:119:93,26:93:3744:26:1035:-57.6196,0,-301.14 0/1:131:75,56:75:3008:56:2226:-161.08,0,-231.371 0/1:297:103,194:103:4098:194:7723:-605.286,0,-279.39 dDocent_Contig_1260 84 . A T 4522.15 . AB=0.2673;ABP=349.647;AC=4;AF=0.333333;AN=12;AO=210;CIGAR=1M1X5M;DP=1038;DPB=1028.71;DPRA=0;EPP=459.02;EPPR=1651.16;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7804;QR=26716;RO=759;RPL=210;RPP=459.02;RPPR=1651.16;RPR=0;RUN=1;SAF=210;SAP=459.02;SAR=0;SRF=759;SRP=1651.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:162:120,1,39:120:4204:1,39:37,1431:-81.0338,-114.13,-455.902,0,-339.22,-330.507 0|1:297:161,47,88:161:5619:47,88:1678,3232:-215.765,-127.439,-570.307,0,-320.225,-430.532 0|0:160:153,6,1:153:5362:6,1:222,39:0,-27.9125,-462.38,-42.8489,-460.98,-478.841 0|1:204:140,11,52:140:4987:11,52:401,1983:-120.542,-129.93,-533.08,0,-373.71,-390.817 0|1:74:56,0,18:56:1998:0,18:0,658:-37.2761,-54.1338,-217.007,0,-163.236,-157.818 0|0:141:129,0,12:129:4546:0,12:0,461:0,-38.8329,-408.932,-0.604845,-371.085,-367.473 dDocent_Contig_1261 98 . N T 49.2374 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=47;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:26:-2.59983,-0.30103,0 1/1:2:0,2:0:0:2:21:-1.99499,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1262 63 . G C 179664 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=5285;CIGAR=1X;DP=5431;DPB=5431;DPRA=0;EPP=11479.2;EPPR=320.045;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999811;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=205488;QR=5674;RO=146;RPL=5285;RPP=11479.2;RPPR=320.045;RPR=0;RUN=1;SAF=5285;SAP=11479.2;SAR=0;SRF=146;SRP=320.045;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:711:35,676:35:1365:676:26299:-2241.82,-90.9304,0 1/1:1047:26,1021:26:1003:1021:39507:-3461.9,-224.612,0 1/1:548:25,523:25:985:523:20397:-1745.28,-76.0186,0 1/1:899:56,843:56:2187:843:32709:-2744.27,-73.6227,0 1/1:1132:0,1132:0:0:1132:44007:-3957.02,-340.766,0 1/1:1094:4,1090:4:134:1090:42569:-3815.31,-316.946,0 dDocent_Contig_1263 18 . A T 4723.07 . AB=0.137846;ABP=2763.3;AC=3;AF=0.25;AN=12;AO=356;CIGAR=1X;DP=5259;DPB=5259;DPRA=0.702332;EPP=776.054;EPPR=10638.9;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999388;PAO=0;PQA=0;PQR=0;PRO=0;QA=14240;QR=196027;RO=4898;RPL=0;RPP=776.054;RPPR=10638.9;RPR=356;RUN=1;SAF=356;SAP=776.054;SAR=0;SRF=4898;SRP=10638.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:674:559,114:559:22300:114:4576:-208.892,0,-1802.23 0/1:967:827,138:827:33100:138:5486:-202.665,0,-2685.04 0/0:649:626,22:626:25068:22:870:0,-116.577,-2175.31 0/1:782:700,82:700:28015:82:3308:-62.3587,0,-2283.43 0/0:1150:1150,0:1150:45934:0:0:0,-346.184,-4129.7 0/0:1037:1036,0:1036:41610:0:0:0,-311.867,-3740.52 dDocent_Contig_1264 53 . C T 1084.56 . AB=0.122247;ABP=1128.44;AC=3;AF=0.25;AN=12;AO=140;CIGAR=1X;DP=1982;DPB=1982;DPRA=0;EPP=307.016;EPPR=3998.52;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995652;PAO=0;PQA=0;PQR=0;PRO=0;QA=5379;QR=72984;RO=1840;RPL=140;RPP=307.016;RPPR=3998.52;RPR=0;RUN=1;SAF=140;SAP=307.016;SAR=0;SRF=1840;SRP=3998.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:229:206,22:206:8203:22:873:-9.90565,0,-668.859 0/1:391:348,43:348:13819:43:1619:-28.2318,0,-1125.01 0/0:380:353,26:353:14082:26:1006:0,-23.6004,-1175.5 0/1:288:242,46:242:9561:46:1760:-71.9277,0,-773.231 0/0:315:314,1:314:12463:1:40:0,-90.8288,-1116.81 0/0:379:377,2:377:14856:2:81:0,-106.405,-1328.25 dDocent_Contig_1265 1 . N G 71.3663 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=3.0103;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.21888;PAIRED=0.5;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=75;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=1;SAP=3.0103;SAR=1;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:75:-7.11959,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1266 26 . T A 1052.45 . AB=0.114604;ABP=1275.06;AC=1;AF=0.0833333;AN=12;AO=178;CIGAR=1X;DP=4851;DPB=4851;DPRA=1.00672;EPP=389.532;EPPR=10141.6;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7021;QR=181699;RO=4669;RPL=0;RPP=389.532;RPPR=10141.6;RPR=178;RUN=1;SAF=178;SAP=389.532;SAR=0;SRF=4669;SRP=10141.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:804:802,0:802:31184:0:0:0,-241.426,-2803.91 0/0:819:796,23:796:30951:23:926:0,-162.899,-2699.62 0/0:677:664,13:664:25969:13:505:0,-158.004,-2289.39 0/0:892:891,1:891:34790:1:11:0,-267.419,-3127.22 0/1:986:872,113:872:33691:113:4470:-105.564,0,-2733.05 0/0:673:644,28:644:25114:28:1109:0,-102.605,-2158.34 dDocent_Contig_1267 1 . N G 497.443 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=17;CIGAR=1X;DP=17;DPB=17;DPRA=0;EPP=18.4661;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=37;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0.176471;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=588;QR=0;RO=0;RPL=0;RPP=39.9253;RPPR=0;RPR=17;RUN=1;SAF=3;SAP=18.4661;SAR=14;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:70:-5.47347,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:6:0,6:0:0:6:199:-16.092,-1.80618,0 1/1:7:0,7:0:0:7:249:-21.5901,-2.10721,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-5.97773,-0.60206,0 dDocent_Contig_1270 23 . T A 1464.88 . AB=0.251852;ABP=147.421;AC=3;AF=0.25;AN=12;AO=73;CIGAR=1X;DP=470;DPB=470;DPRA=1.25373;EPP=161.528;EPPR=865.085;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.931507;PAIREDR=0.891688;PAO=0;PQA=0;PQR=0;PRO=0;QA=2724;QR=15383;RO=397;RPL=0;RPP=161.528;RPPR=865.085;RPR=73;RUN=1;SAF=73;SAP=161.528;SAR=0;SRF=397;SRP=865.085;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:71:55,16:55:2109:16:603:-33.2343,0,-168.651 0/1:131:90,41:90:3467:41:1522:-97.8183,0,-272.701 0/0:66:61,5:61:2339:5:186:0,-2.76715,-193.61 0/1:68:57,11:57:2224:11:413:-17.0448,0,-179.888 0/0:62:62,0:62:2430:0:0:0,-18.6639,-218.878 0/0:72:72,0:72:2814:0:0:0,-21.6742,-253.404 dDocent_Contig_1271 17 . C T 1563.69 . AB=0.154255;ABP=783.816;AC=1;AF=0.0833333;AN=12;AO=327;CIGAR=1X;DP=4252;DPB=4252;DPRA=0;EPP=713.082;EPPR=8521.7;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999745;PAO=0;PQA=0;PQR=0;PRO=0;QA=11892;QR=155493;RO=3923;RPL=0;RPP=713.082;RPPR=8521.7;RPR=327;RUN=1;SAF=327;SAP=713.082;SAR=0;SRF=3923;SRP=8521.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:524:487,37:487:19257:37:1374:0,-33.7932,-1607.65 0/1:752:636,116:636:25156:116:4255:-156.688,0,-2035.54 0/0:641:585,56:585:23194:56:2012:0,-11.6418,-1904.17 0/0:614:563,50:563:22356:50:1776:0,-24.8291,-1850.11 0/0:866:819,46:819:32542:46:1673:0,-109.965,-2775.02 0/0:855:833,22:833:32988:22:802:0,-184.879,-2893.48 dDocent_Contig_1273 7 . T A 2186.43 . AB=0.32;ABP=80.4016;AC=3;AF=0.25;AN=12;AO=95;CIGAR=1X;DP=518;DPB=518;DPRA=2.15455;EPP=209.3;EPPR=915.029;GTI=0;LEN=1;MEANALT=1.6;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3628;QR=16106;RO=420;RPL=0;RPP=209.3;RPPR=915.029;RPR=95;RUN=1;SAF=95;SAP=209.3;SAR=0;SRF=420;SRP=915.029;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:44,0:44:1690:0:0:0,-13.2453,-152.358 0/0:107:104,2:104:3963:2:78:0,-24.8688,-349.377 0/1:84:56,28:56:2141:28:1077:-71.95,0,-167.631 0/0:92:87,5:87:3348:5:195:0,-9.77056,-283.533 0/1:82:61,20:61:2348:20:758:-43.9354,0,-186.925 0/1:109:68,40:68:2616:40:1520:-104.367,0,-202.929 dDocent_Contig_1274 43 . C G 215.782 . AB=0.113861;ABP=264.619;AC=3;AF=0.25;AN=12;AO=26;CIGAR=1X;DP=514;DPB=514;DPRA=0.753659;EPP=59.4686;EPPR=1058.35;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1040;QR=19155;RO=486;RPL=0;RPP=59.4686;RPPR=1058.35;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=486;SRP=1058.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:56:50,6:50:1989:6:242:-5.29985,0,-162.35 0/1:60:53,7:53:2110:7:278:-7.32658,0,-172.025 0/0:107:103,3:103:4003:3:119:0,-20.9812,-349.248 0/1:86:76,10:76:3024:10:401:-10.5613,0,-246.363 0/0:124:124,0:124:4839:0:0:0,-37.3277,-435.436 0/0:81:80,0:80:3190:0:0:0,-24.0824,-287.085 dDocent_Contig_1275 30 . T A 127.23 . AB=0.128205;ABP=96.662;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=463;DPB=463;DPRA=1.01299;EPP=24.725;EPPR=978.001;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.839644;PAO=0;PQA=0;PQR=0;PRO=0;QA=403;QR=18048;RO=449;RPL=0;RPP=24.725;RPPR=978.001;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=449;SRP=978.001;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:49:49,0:49:1970:0:0:0,-14.7505,-177.495 0/0:90:90,0:90:3619:0:0:0,-27.0927,-325.723 0/0:65:65,0:65:2585:0:0:0,-19.5669,-232.776 0/0:100:100,0:100:4037:0:0:0,-30.103,-363.292 0/0:81:78,0:78:3131:0:0:0,-23.4803,-281.45 0/1:78:67,10:67:2706:10:403:-13.0417,0,-220.056 dDocent_Contig_1276 98 . N A 518.784 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=20;CIGAR=1X;DP=20;DPB=20;DPRA=0;EPP=46.4397;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=553;QR=0;RO=0;RPL=20;RPP=46.4397;RPPR=0;RPR=0;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:116:-10.7264,-1.20412,0 1/1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:105:-9.71126,-1.20412,0 1/1:6:0,6:0:0:6:165:-15.1215,-1.80618,0 1/1:4:0,4:0:0:4:99:-9.15604,-1.20412,0 dDocent_Contig_1277 94 . G A 31.1011 . AB=0.129032;ABP=40.0654;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=277;DPB=277;DPRA=0.588785;EPP=16.0391;EPPR=591.479;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.649446;PAO=0;PQA=0;PQR=0;PRO=0;QA=207;QR=9193;RO=271;RPL=3;RPP=3.0103;RPPR=8.01831;RPR=3;RUN=1;SAF=3;SAP=3.0103;SAR=3;SRF=148;SRP=8.01831;SRR=123;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:847:0:0:0,-7.82678,-76.5293 0/0:83:83,0:83:2806:0:0:0,-24.9855,-252.79 0/0:52:52,0:52:1781:0:0:0,-15.6536,-160.574 0/0:53:53,0:53:1802:0:0:0,-15.9546,-162.461 0/0:32:30,2:30:1033:2:69:0,-3.0803,-86.7269 0/1:31:27,4:27:924:4:138:-3.42852,0,-74.1411 dDocent_Contig_1278 69 . A G 40.71 . AB=0.10084;ABP=167.695;AC=1;AF=0.0833333;AN=12;AO=33;CIGAR=1X;DP=1007;DPB=1007;DPRA=0.754502;EPP=74.6689;EPPR=2115.85;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.545455;PAIREDR=0.964029;PAO=0;PQA=0;PQR=0;PRO=0;QA=1182;QR=34698;RO=973;RPL=33;RPP=74.6689;RPPR=2115.85;RPR=0;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=973;SRP=2115.85;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:186:183,2:183:6352:2:59:0,-50.2646,-566.231 0/0:211:211,0:211:7340:0:0:0,-63.5173,-660.652 0/1:119:107,12:107:3874:12:443:-4.38973,0,-312.987 0/0:193:188,5:188:6836:5:170:0,-42.4678,-599.581 0/0:174:166,8:166:6088:8:286:0,-26.299,-521.831 0/0:124:118,6:118:4208:6:224:0,-16.8104,-358.329 dDocent_Contig_1279 27 . A G 16139.9 . AB=0.17729;ABP=4416.36;AC=5;AF=0.416667;AN=12;AO=879;CIGAR=1X;DP=5969;DPB=5969;DPRA=0;EPP=1911.73;EPPR=11047.1;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999803;PAO=0;PQA=0;PQR=0;PRO=0;QA=34839;QR=202271;RO=5086;RPL=0;RPP=1911.73;RPPR=11047.1;RPR=879;RUN=1;SAF=879;SAP=1911.73;SAR=0;SRF=5086;SRP=11047.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:989:800,189:800:31704:189:7563:-382.545,0,-2552.81 0/1:1069:842,225:842:33481:225:8849:-474.451,0,-2688.83 0/1:692:591,101:591:23608:101:3982:-150.057,0,-1914.32 0/1:993:749,243:749:29784:243:9660:-569.82,0,-2378.95 0/1:1136:1028,107:1028:40810:107:4246:-40.3206,0,-3327.33 0/0:1090:1076,14:1076:42884:14:539:0,-279.282,-3806.69 dDocent_Contig_1280 40 . A C 3356.53 . AB=0.131977;ABP=2258.22;AC=2;AF=0.166667;AN=12;AO=294;CIGAR=1X;DP=4012;DPB=4012;DPRA=0;EPP=641.423;EPPR=8070.03;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999192;PAO=0;PQA=0;PQR=0;PRO=0;QA=11803;QR=147927;RO=3715;RPL=0;RPP=641.423;RPPR=8070.03;RPR=294;RUN=1;SAF=294;SAP=641.423;SAR=0;SRF=3715;SRP=8070.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:368:363,5:363:14495:5:205:0,-91.944,-1284.6 0/0:703:681,22:681:27071:22:884:0,-131.758,-2354.12 0/0:392:386,6:386:15372:6:242:0,-95.8473,-1360.08 0/0:632:624,8:624:24735:8:321:0,-160.993,-2194.74 0/1:1026:883,142:883:35209:142:5717:-205.348,0,-2856.57 0/1:891:778,111:778:31045:111:4434:-131.118,0,-2523.35 dDocent_Contig_1281 98 . N A 34955.5 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=1159;CIGAR=1X;DP=1159;DPB=1159;DPRA=0;EPP=2519.75;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.992235;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=38821;QR=0;RO=0;RPL=1159;RPP=2519.75;RPPR=0;RPR=0;RUN=1;SAF=1159;SAP=2519.75;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:203:0,203:0:0:203:6851:-616.714,-61.1091,0 1/1:207:0,207:0:0:207:6920:-622.919,-62.3132,0 1/1:111:0,111:0:0:111:3706:-333.761,-33.4143,0 1/1:203:0,203:0:0:203:6842:-615.905,-61.1091,0 1/1:230:0,230:0:0:230:7646:-688.241,-69.2369,0 1/1:205:0,205:0:0:205:6856:-617.164,-61.7112,0 dDocent_Contig_1282 12 . T G 188.804 . AB=0.128;ABP=153.259;AC=1;AF=0.0833333;AN=12;AO=26;CIGAR=1X;DP=512;DPB=512;DPRA=1.70899;EPP=59.4686;EPPR=1054;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=59.5165;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.886364;PAO=0;PQA=0;PQR=0;PRO=0;QA=1022;QR=19314;RO=484;RPL=0;RPP=59.4686;RPPR=1054;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=484;SRP=1054;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:73:73,0:73:2915:0:0:0,-21.9752,-262.449 0/0:130:123,7:123:4865:7:280:0,-13.5623,-411.02 0/1:125:107,16:107:4268:16:625:-19.1992,0,-346.564 0/0:68:65,3:65:2600:3:117:0,-9.56021,-222.42 0/0:38:38,0:38:1534:0:0:0,-11.4391,-138.298 0/0:78:78,0:78:3132:0:0:0,-23.4803,-280.583 dDocent_Contig_1283 21 . A G 79.8379 . AB=0.105263;ABP=131.584;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=735;DPB=735;DPRA=0.742188;EPP=24.725;EPPR=1577.33;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.5959;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.935172;PAO=0;PQA=0;PQR=0;PRO=0;QA=406;QR=28961;RO=725;RPL=0;RPP=24.725;RPPR=1577.33;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=725;SRP=1577.33;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:114:114,0:114:4593:0:0:0,-34.3174,-413.156 0/0:176:176,0:176:7028:0:0:0,-52.9813,-632.088 0/1:95:85,10:85:3363:10:406:-8.30255,0,-273.809 0/0:132:132,0:132:5283:0:0:0,-39.736,-474.594 0/0:109:109,0:109:4352:0:0:0,-32.8123,-391.569 0/0:109:109,0:109:4342:0:0:0,-32.8123,-390.592 dDocent_Contig_1284 22 . A G 93.9887 . AB=0.103659;ABP=226.778;AC=1;AF=0.0833333;AN=12;AO=22;CIGAR=1X;DP=1078;DPB=1078;DPRA=0.635697;EPP=50.7827;EPPR=2296.09;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998106;PAO=0;PQA=0;PQR=0;PRO=0;QA=857;QR=42140;RO=1056;RPL=0;RPP=50.7827;RPPR=2296.09;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=1056;SRP=2296.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:126:126,0:126:5041:0:0:0,-37.9298,-453.562 0/0:149:149,0:149:5933:0:0:0,-44.8535,-533.749 0/0:96:91,5:91:3641:5:204:0,-10.1548,-308.959 0/1:164:147,17:147:5847:17:653:-9.71763,0,-476.657 0/0:308:308,0:308:12264:0:0:0,-92.7172,-1102.89 0/0:235:235,0:235:9414:0:0:0,-70.742,-846.666 dDocent_Contig_1285 107 . N T 70.2011 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=69;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:41:-3.8937,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:28:-2.79973,-0.30103,0 dDocent_Contig_1286 9 . G A 7206.85 . AB=0.473022;ABP=6.52527;AC=6;AF=0.5;AN=12;AO=263;CIGAR=1X;DP=556;DPB=556;DPRA=0;EPP=574.108;EPPR=637.08;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996575;PAO=0;PQA=0;PQR=0;PRO=0;QA=9892;QR=11090;RO=292;RPL=0;RPP=574.108;RPPR=637.08;RPR=263;RUN=1;SAF=263;SAP=574.108;SAR=0;SRF=292;SRP=637.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:131:82,49:82:3079:49:1844:-126.777,0,-237.839 0/1:104:58,46:58:2216:46:1731:-124.743,0,-168.356 0/1:83:45,38:45:1730:38:1424:-103.453,0,-130.973 0/1:85:56,29:56:2128:29:1078:-71.734,0,-166.166 0/1:64:23,41:23:865:41:1542:-119.786,0,-58.9009 0/1:89:28,60:28:1072:60:2273:-178.19,0,-70.1752 dDocent_Contig_1287 33 . G A 223.726 . AB=0.131783;ABP=154.929;AC=2;AF=0.166667;AN=12;AO=19;CIGAR=1X;DP=296;DPB=296;DPRA=2.78889;EPP=44.2683;EPPR=604.508;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=761;QR=11045;RO=277;RPL=0;RPP=44.2683;RPPR=604.508;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=277;SRP=604.508;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:49:40,9:40:1553:9:359:-17.9203,0,-125.251 0/0:81:80,1:80:3176:1:40:0,-20.3877,-281.916 0/1:80:72,8:72:2887:8:322:-5.26595,0,-235.84 0/0:41:40,1:40:1616:1:40:0,-8.34655,-141.674 0/0:25:25,0:25:1012:0:0:0,-7.52575,-91.3718 0/0:20:20,0:20:801:0:0:0,-6.0206,-72.4068 dDocent_Contig_1288 21 . T C 14655.8 . AB=0.80131;ABP=364.176;AC=7;AF=0.583333;AN=12;AO=460;CIGAR=1X;DP=557;DPB=557;DPRA=0;EPP=1001.89;EPPR=213.643;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.995652;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=18081;QR=3669;RO=97;RPL=0;RPP=1001.89;RPPR=213.643;RPR=460;RUN=1;SAF=460;SAP=1001.89;SAR=0;SRF=97;SRP=213.643;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:127:23,104:23:869:104:4065:-327.619,0,-40.294 0/1:123:17,106:17:647:106:4201:-341.044,0,-21.5374 0/1:55:5,50:5:196:50:1979:-161.753,0,-1.45728 1/1:99:6,93:6:232:93:3622:-304.771,-8.55337,0 0/1:85:34,51:34:1264:51:2031:-157.396,0,-88.459 0/1:68:12,56:12:461:56:2183:-176.182,0,-21.3707 dDocent_Contig_1289 98 . N T 231.222 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=10;CIGAR=1X;DP=11;DPB=11;DPRA=0;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=241;QR=0;RO=0;RPL=10;RPP=24.725;RPPR=0;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:77:-7.1218,-1.20412,0 1/1:3:0,3:0:0:3:97:-9.05117,-0.90309,0 1/1:2:0,1:0:0:1:20:-1.86496,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:47:-4.4648,-0.60206,0 dDocent_Contig_1290 14 . C A 9322.15 . AB=0.383562;ABP=106.17;AC=6;AF=0.5;AN=12;AO=336;CIGAR=1X;DP=876;DPB=876;DPRA=0;EPP=732.625;EPPR=1175.61;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.261905;PAIREDR=0.859259;PAO=0;PQA=0;PQR=0;PRO=0;QA=13321;QR=21691;RO=540;RPL=0;RPP=732.625;RPPR=1175.61;RPR=336;RUN=1;SAF=336;SAP=732.625;SAR=0;SRF=540;SRP=1175.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:165:89,76:89:3581:76:3026:-222.757,0,-272.64 0/1:210:160,50:160:6432:50:1977:-114.909,0,-515.383 0/1:113:89,24:89:3588:24:965:-53.1339,0,-288.922 0/1:191:119,72:119:4768:72:2876:-201.451,0,-371.52 0/1:85:47,38:47:1901:38:1494:-109.11,0,-145.7 0/1:112:36,76:36:1421:76:2983:-234.85,0,-94.4242 dDocent_Contig_1291 24 . C G 551.054 . AB=0.116279;ABP=607.942;AC=1;AF=0.0833333;AN=12;AO=105;CIGAR=1X;DP=2209;DPB=2209;DPRA=0;EPP=231.015;EPPR=4565.27;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.996192;PAO=0;PQA=0;PQR=0;PRO=0;QA=4142;QR=83603;RO=2101;RPL=0;RPP=231.015;RPPR=4565.27;RPR=105;RUN=1;SAF=105;SAP=231.015;SAR=0;SRF=2101;SRP=4565.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:326:317,9:317:12509:9:324:0,-68.6475,-1095.45 0/0:389:388,1:388:15433:1:31:0,-114.001,-1384.66 0/0:263:261,1:261:10417:1:35:0,-75.741,-933.317 0/0:340:313,27:313:12505:27:1076:0,-5.22915,-1027.42 0/1:473:418,55:418:16617:55:2196:-55.4241,0,-1351.81 0/0:418:404,12:404:16122:12:480:0,-82.0724,-1406.13 dDocent_Contig_1292 44 . A C 570.483 . AB=0.14741;ABP=274.046;AC=4;AF=0.333333;AN=12;AO=37;CIGAR=1X;DP=378;DPB=378;DPRA=0.988189;EPP=83.3548;EPPR=743.482;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.675676;PAIREDR=0.72434;PAO=0;PQA=0;PQR=0;PRO=0;QA=1484;QR=13624;RO=341;RPL=0;RPP=83.3548;RPPR=743.482;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=341;SRP=743.482;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:53:48,5:48:1911:5:197:-2.15093,0,-156.241 0/0:71:71,0:71:2842:0:0:0,-21.3731,-255.878 0/0:56:56,0:56:2259:0:0:0,-16.8577,-203.468 0/1:73:65,8:65:2619:8:325:-7.64444,0,-213.855 0/1:64:47,17:47:1886:17:676:-41.9031,0,-150.677 0/1:61:54,7:54:2107:7:286:-7.75199,0,-171.445 dDocent_Contig_1293 21 . C T 117735 . AB=0.0801724;ABP=7106.54;AC=1;AF=0.0833333;AN=12;AO=372;CIGAR=3M1X3M6D11M;DP=5649;DPB=4526.08;DPRA=0;EPP=810.798;EPPR=1271.15;GTI=0;LEN=1;MEANALT=20;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=14281;QR=22689;RO=584;RPL=0;RPP=810.798;RPPR=1271.15;RPR=372;RUN=1;SAF=372;SAP=810.798;SAR=0;SRF=584;SRP=1271.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:897:157,83,91,34,445,25:157:6084:83,91,34,445,25:3225,3495,1294,16311,943:-1285.55,-1067.82,-1542.63,-1045.93,-1280.74,-1518.33,-1226.69,-1461.49,-1439.6,-1716.25,0,-234.806,-212.913,-393.668,-365.835,-1255.56,-1490.36,-1468.47,-1649.22,-422.537,-1747.82 1|0:1144:131,62,135,68,677,7:131:5130:62,135,68,677,7:2436,5158,2507,25037,285:-2009.51,-1848.59,-2251.75,-1625.77,-1847.24,-2006.96,-1843.97,-2065.43,-1842.62,-2245.32,-1.34876,-222.812,0,-218.193,-219.374,-2025.44,-2246.9,-2024.09,-2242.28,-399.66,-2445.15 0|0:711:90,50,63,9,413,54:90:3469:50,63,9,413,54:1945,2434,342,15308,2090:-1225.09,-1092.35,-1362.13,-1052.28,-1177.28,-1318.15,-1224.14,-1349.14,-1309.06,-1506.26,0,-124.999,-84.9278,-256.782,-160.503,-1080.53,-1205.53,-1165.46,-1337.32,-113.179,-1349.11 0|0:929:199,18,80,0,561,59:199:7730:18,80,0,561,59:711,3076,0,20735,2320:-1635.78,-1637.18,-2266.92,-1443.18,-2019.83,-2054.25,-1695.69,-2272.33,-2078.34,-2330.84,0,-576.647,-382.65,-635.154,-466.276,-1504.87,-2081.52,-1887.52,-2140.02,-444.335,-2122.26 0|0:1009:0,177,0,0,778,32:0:0:177,0,0,778,32:6915,0,0,28841,1252:-2927.75,-2359.28,-2306,-2927.75,-2359.28,-2927.75,-2927.75,-2359.28,-2927.75,-2927.75,-568.497,0,-568.497,-568.497,-334.296,-2824.84,-2256.36,-2824.84,-2824.84,-465.581,-2815.2 0|0:959:7,231,3,4,658,43:7:276:231,3,4,658,43:9039,118,152,24171,1647:-2693.81,-1952.74,-1905.91,-2686.21,-1965.74,-2708.01,-2683.45,-1962.99,-2696.45,-2704.96,-720.48,0,-733.481,-730.724,-545.11,-2560.79,-1840.32,-2573.79,-2571.03,-608.058,-2570.55 dDocent_Contig_1294 10 . G A 79314.4 . AB=0.873846;ABP=792.077;AC=10;AF=0.833333;AN=12;AO=2325;CIGAR=1X;DP=2451;DPB=2451;DPRA=0;EPP=5051.68;EPPR=209.3;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.99957;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=91536;QR=3771;RO=95;RPL=0;RPP=5051.68;RPPR=209.3;RPR=2325;RUN=1;SAF=2325;SAP=5051.68;SAR=0;SRF=95;SRP=209.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:304:30,269:30:1195:269:10648:-867.319,0,-17.4688 0/1:346:35,299:35:1387:299:11777:-958.264,0,-24.1549 1/1:386:18,355:18:710:355:14023:-1196.86,-48.4539,0 1/1:438:11,426:11:439:426:16662:-1458.47,-92.0931,0 1/1:449:0,449:0:0:449:17654:-1587.54,-135.162,0 1/1:528:1,527:1:40:527:20772:-1863.81,-154.948,0 dDocent_Contig_1295 9 . A G 67.3264 . AB=0.122807;ABP=73.4498;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=217;DPB=217;DPRA=1.14493;EPP=20.3821;EPPR=456.848;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.7895;NS=6;NUMALT=1;ODDS=0;PAIRED=0.875;PAIREDR=0.703349;PAO=0;PQA=0;PQR=0;PRO=0;QA=303;QR=7942;RO=209;RPL=0;RPP=20.3821;RPPR=456.848;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=209;SRP=456.848;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:21,1:21:794:1:38:0,-2.82539,-67.9851 0/0:35:35,0:35:1346:0:0:0,-10.536,-121.424 0/0:15:15,0:15:571:0:0:0,-4.51545,-49.6471 0/1:57:50,7:50:1901:7:265:-7.05138,0,-154.176 0/0:50:50,0:50:1895:0:0:0,-15.0515,-170.796 0/0:38:38,0:38:1435:0:0:0,-11.4391,-129.426 dDocent_Contig_1296 18 . T G 80.1975 . AB=0.133333;ABP=55.5599;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=153;DPB=153;DPRA=1.51724;EPP=18.2106;EPPR=320.045;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.849315;PAO=0;PQA=0;PQR=0;PRO=0;QA=279;QR=5695;RO=146;RPL=0;RPP=18.2106;RPPR=320.045;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=146;SRP=320.045;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:13:13,0:13:505:0:0:0,-3.91339,-45.7966 0/0:27:27,0:27:1038:0:0:0,-8.12781,-93.7204 0/0:21:20,1:20:787:1:40:0,-2.32595,-67.1532 0/1:45:39,6:39:1537:6:239:-8.33845,0,-125.032 0/0:17:17,0:17:679:0:0:0,-5.11751,-61.4418 0/0:30:30,0:30:1149:0:0:0,-9.0309,-103.69 dDocent_Contig_1297 1 . N G 1513.39 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=48;CIGAR=1X;DP=48;DPB=48;DPRA=0;EPP=107.241;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1651;QR=0;RO=0;RPL=0;RPP=107.241;RPPR=0;RPR=48;RUN=1;SAF=0;SAP=107.241;SAR=48;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 1/1:7:0,7:0:0:7:242:-22.1176,-2.10721,0 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 1/1:7:0,7:0:0:7:240:-21.9351,-2.10721,0 1/1:21:0,21:0:0:21:723:-65.3906,-6.32163,0 1/1:10:0,10:0:0:10:348:-31.656,-3.0103,0 dDocent_Contig_1298 21 . G A 2818.17 . AB=0.664234;ABP=35.1069;AC=3;AF=0.25;AN=12;AO=91;CIGAR=1X;DP=233;DPB=233;DPRA=1.42708;EPP=200.614;EPPR=311.359;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992958;PAO=0;PQA=0;PQR=0;PRO=0;QA=3598;QR=5571;RO=142;RPL=0;RPP=200.614;RPPR=311.359;RPR=91;RUN=1;SAF=91;SAP=200.614;SAR=0;SRF=142;SRP=311.359;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:30,3:30:1180:3:120:-1.25391,0,-96.5413 0/0:18:18,0:18:729:0:0:0,-5.41854,-65.9349 0/0:66:66,0:66:2540:0:0:0,-19.868,-228.73 0/0:12:12,0:12:480:0:0:0,-3.61236,-43.5492 0/1:63:8,55:8:320:55:2196:-178.848,0,-10.2019 0/1:41:8,33:8:322:33:1282:-103.301,0,-17.0061 dDocent_Contig_1299 107 . N G 253.864 . AB=0.714286;ABP=5.80219;AC=10;AF=1;AN=10;AO=9;CIGAR=1X6M;DP=12;DPB=11.7143;DPRA=2.75;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1.25;MQM=40;MQMR=0;NS=5;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=250;QR=0;RO=0;RPL=0;RPP=22.5536;RPPR=0;RPR=9;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:1:0,0,1:0:0:0,1:0,12:-1.19936,-1.19936,-1.19936,-0.30103,-0.30103,0 1|1:2:0,0,2:0:0:0,2:0,64:-5.93517,-5.93517,-5.93517,-0.60206,-0.60206,0 .:.:.:.:.:.:.:. 1|1:7:0,2,5:0:0:2,5:50,145:-15.275,-11.4362,-10.8341,-4.09583,0,-2.59068 1|1:1:0,0,0:0:0:0,0:0,0:0,0,0,0,0,0 1|1:1:0,0,1:0:0:0,1:0,29:-2.86684,-2.86684,-2.86684,-0.30103,-0.30103,0 dDocent_Contig_1300 180 . G C 206.89 . AB=0.333333;ABP=5.18177;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X2M4I3M1X;DP=96;DPB=115.143;DPRA=0.519231;EPP=9.52472;EPPR=109.412;GTI=0;LEN=1;MEANALT=3;MQM=40;MQMR=59.4694;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.77551;PAO=0;PQA=0;PQR=805;PRO=24.5;QA=113;QR=1927;RO=49;RPL=3;RPP=9.52472;RPPR=109.412;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=109.412;SRR=49;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:22:11,0,0,4,0:11:439:0,0,4,0:0,0,141,0:-7.68433,-10.9957,-47.1488,-10.9957,-47.1488,-47.1488,0,-36.1297,-36.1297,-34.9256,-10.9957,-47.1488,-47.1488,-36.1297,-47.1488 0|0:13:2,0,2,0,3:2:78:0,2,0,3:0,71,0,103:-7.47421,-8.07627,-13.8656,-2.52751,-8.31699,-7.71493,-8.07627,-13.8656,-8.31699,-13.8656,0,-5.78883,-0.241619,-5.78883,-4.88574 0|1:9:4,3,0,0,0:4:160:3,0,0,0:113,0,0,0:-7.09946,0,-11.8367,-8.30358,-12.7398,-21.3779,-8.30358,-12.7398,-21.3779,-21.3779,-8.30358,-12.7398,-21.3779,-21.3779,-21.3779 0|0:20:12,0,0,0,0:12:474:0,0,0,0:0,0,0,0:0,-3.61236,-42.573,-3.61236,-42.573,-42.573,-3.61236,-42.573,-42.573,-42.573,-3.61236,-42.573,-42.573,-42.573,-42.573 0|0:13:6,0,0,0,0:6:239:0,0,0,0:0,0,0,0:0,-1.80618,-21.4468,-1.80618,-21.4468,-21.4468,-1.80618,-21.4468,-21.4468,-21.4468,-1.80618,-21.4468,-21.4468,-21.4468,-21.4468 0|0:19:14,0,0,0,0:14:537:0,0,0,0:0,0,0,0:0,-4.21442,-48.1754,-4.21442,-48.1754,-48.1754,-4.21442,-48.1754,-48.1754,-48.1754,-4.21442,-48.1754,-48.1754,-48.1754,-48.1754 dDocent_Contig_1301 56 . A G 730.426 . AB=0.510638;ABP=3.0565;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=1X;DP=322;DPB=322;DPRA=1.08134;EPP=57.2971;EPPR=645.766;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996622;PAO=0;PQA=0;PQR=0;PRO=0;QA=977;QR=11451;RO=296;RPL=25;RPP=57.2971;RPPR=645.766;RPR=0;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=296;SRP=645.766;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:47:47,0:47:1836:0:0:0,-14.1484,-165.466 0/0:66:65,1:65:2529:1:8:0,-19.068,-226.965 0/0:50:50,0:50:1926:0:0:0,-15.0515,-173.547 0/0:33:33,0:33:1275:0:0:0,-9.93399,-115.025 0/0:79:78,0:78:2980:0:0:0,-23.4803,-268.079 0/1:47:23,24:23:905:24:969:-73.3613,0,-67.61 dDocent_Contig_1302 18 . C T 194.924 . AB=0.174603;ABP=60.9507;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1M1D3M1X;DP=166;DPB=164.167;DPRA=1.2233;EPP=26.8965;EPPR=335.246;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.727273;PAIREDR=0.745098;PAO=0;PQA=0;PQR=0;PRO=0;QA=428;QR=6008;RO=153;RPL=0;RPP=26.8965;RPPR=335.246;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=153;SRP=335.246;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:30:29,0:29:1127:0:0:0,-8.72987,-101.607 0|0:19:19,0:19:757:0:0:0,-5.71957,-68.4534 0|0:31:31,0:31:1214:0:0:0,-9.33193,-109.54 0|0:23:23,0:23:886:0:0:0,-6.92369,-80.0476 0|1:38:31,7:31:1231:7:265:-12.7697,0,-99.6313 0|1:25:20,4:20:793:4:163:-7.53633,0,-64.1912 dDocent_Contig_1303 175 . C A 79.7427 . AB=0.333333;ABP=5.18177;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=88;DPB=88;DPRA=0.56962;EPP=9.52472;EPPR=187.585;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=118;QR=3303;RO=85;RPL=3;RPP=9.52472;RPPR=187.585;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=187.585;SRR=85;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:822:0:0:0,-6.32163,-74.294 0/0:7:7,0:7:257:0:0:0,-2.10721,-23.472 0/0:15:15,0:15:583:0:0:0,-4.51545,-52.8045 0/0:19:19,0:19:743:0:0:0,-5.71957,-67.1901 0/1:9:6,3:6:224:3:118:-8.29293,0,-17.8068 0/0:17:17,0:17:674:0:0:0,-5.11751,-60.9884 dDocent_Contig_1305 12 . G C 29264.8 . AB=0.850288;ABP=558.278;AC=9;AF=0.75;AN=12;AO=887;CIGAR=1X;DP=994;DPB=994;DPRA=0;EPP=1929.11;EPPR=235.358;GTI=0;LEN=1;MEANALT=1;MQM=59.9639;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.99549;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=35436;QR=4231;RO=107;RPL=0;RPP=1929.11;RPPR=235.358;RPR=887;RUN=1;SAF=887;SAP=1929.11;SAR=0;SRF=107;SRP=235.358;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:166:10,156:10:383:156:6225:-525.183,-15.1533,0 0/1:187:30,157:30:1197:157:6286:-508.956,0,-51.7163 1/1:97:6,91:6:224:91:3600:-303.514,-8.6858,0 0/1:149:24,125:24:955:125:4973:-402.501,0,-41.3954 1/1:210:13,197:13:522:197:7901:-663.319,-15.8897,0 0/1:185:24,161:24:950:161:6451:-524.616,0,-30.1117 dDocent_Contig_1306 107 . N C 229.888 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=235;QR=0;RO=0;RPL=0;RPP=22.5536;RPPR=0;RPR=9;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:100:-9.33053,-0.90309,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 1/1:1:0,1:0:0:1:12:-1.19999,-0.30103,0 1/1:2:0,2:0:0:2:46:-4.36869,-0.60206,0 dDocent_Contig_1308 36 . A C 14917.1 . AB=0.192449;ABP=3136.51;AC=6;AF=0.5;AN=12;AO=734;CIGAR=1X;DP=3814;DPB=3814;DPRA=0;EPP=1596.87;EPPR=6678.12;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998638;PAIREDR=0.996422;PAO=0;PQA=0;PQR=0;PRO=0;QA=29378;QR=121574;RO=3074;RPL=0;RPP=1596.87;RPPR=6678.12;RPR=734;RUN=1;SAF=734;SAP=1596.87;SAR=0;SRF=3074;SRP=6678.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:379:296,83:296:11633:83:3297:-182.689,0,-932.138 0/1:545:418,127:418:16496:127:5071:-292.181,0,-1319.33 0/1:680:580,99:580:22994:99:4002:-155.575,0,-1862.97 0/1:399:339,59:339:13392:59:2389:-94.9726,0,-1084.13 0/1:792:602,189:602:23698:189:7514:-437.348,0,-1892.38 0/1:1019:839,177:839:33361:177:7105:-332.945,0,-2693.37 dDocent_Contig_1309 7 . T C 14639.5 . AB=0.464764;ABP=15.0996;AC=6;AF=0.5;AN=12;AO=521;CIGAR=1X;DP=1121;DPB=1121;DPRA=0;EPP=1134.35;EPPR=1305.89;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.990403;PAIREDR=0.975;PAO=0;PQA=0;PQR=0;PRO=0;QA=20051;QR=23034;RO=600;RPL=0;RPP=1134.35;RPPR=1305.89;RPR=521;RUN=1;SAF=521;SAP=1134.35;SAR=0;SRF=600;SRP=1305.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:163:69,94:69:2663:94:3609:-275.858,0,-190.789 0/1:247:106,141:106:4071:141:5435:-414.777,0,-292.124 0/1:178:87,91:87:3321:91:3497:-261.269,0,-245.453 0/1:233:104,129:104:4016:129:4973:-377.446,0,-291.385 0/1:210:171,39:171:6540:39:1499:-71.9649,0,-525.294 0/1:90:63,27:63:2423:27:1038:-66.6358,0,-191.184 dDocent_Contig_1310 32 . G A 1788.64 . AB=0.266667;ABP=109.412;AC=5;AF=0.416666;AN=12;AO=66;CIGAR=1X4M1X;DP=346;DPB=346;DPRA=0;EPP=146.327;EPPR=563.25;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=0.030303;PAIREDR=0.984496;PAO=0;PQA=0;PQR=0;PRO=0;QA=2555;QR=9961;RO=258;RPL=0;RPP=146.327;RPPR=563.25;RPR=66;RUN=1;SAF=66;SAP=146.327;SAR=0;SRF=258;SRP=563.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:36:28,0,8:28:1068:0,8:0,313:-17.6958,-26.1246,-113.726,0,-87.9901,-85.5819 0|1:44:23,0,20:23:892:0,20:0,750:-54.7606,-61.6842,-134.981,0,-73.5677,-67.5471 0|0:121:115,0,6:115:4446:0,6:0,240:0,-34.6184,-399.743,-14.449,-379.973,-378.167 0|1:44:34,0,10:34:1301:0,10:0,396:-22.7509,-32.9859,-139.733,0,-107.139,-104.129 0|1:47:26,16,5:26:1018:16,5:614,199:-42.5547,0,-78.8851,-33.9923,-67.3147,-116.199 0|1:54:32,4,17:32:1236:4,17:162,657:-44.3031,-40.5747,-140.877,0,-88.1322,-96.3747 dDocent_Contig_1312 1 . N G 70.4189 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.21888;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=74;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:74:-7.02486,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1313 13 . A C 12737.9 . AB=0.194523;ABP=2578.08;AC=4;AF=0.333333;AN=12;AO=722;CIGAR=1X;DP=4835;DPB=4835;DPRA=0;EPP=1570.81;EPPR=8934.28;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=28993;QR=164676;RO=4113;RPL=0;RPP=1570.81;RPPR=8934.28;RPR=722;RUN=1;SAF=722;SAP=1570.81;SAR=0;SRF=4113;SRP=8934.28;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:819:655,164:655:26173:164:6591:-346.344,0,-2106.67 0/0:851:812,39:812:32502:39:1588:0,-113.03,-2779.01 0/0:807:742,65:742:29743:65:2587:0,-9.98561,-2441.17 0/1:825:745,80:745:29835:80:3223:-41.7726,0,-2434.02 0/1:701:463,238:463:18522:238:9532:-646.249,0,-1454.4 0/1:832:696,136:696:27901:136:5472:-241.832,0,-2258.08 dDocent_Contig_1314 34 . T A 27879 . AB=0.637907;ABP=236.589;AC=6;AF=0.5;AN=12;AO=902;CIGAR=1X;DP=1414;DPB=1414;DPRA=0;EPP=1961.68;EPPR=1112.63;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.9789;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998891;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=35765;QR=20277;RO=511;RPL=0;RPP=1961.68;RPPR=1112.63;RPR=902;RUN=1;SAF=902;SAP=1961.68;SAR=0;SRF=511;SRP=1112.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:139:25,114:25:1016:114:4477:-361.052,0,-49.8891 0/1:275:42,233:42:1672:233:9242:-748.473,0,-67.922 0/1:242:57,184:57:2270:184:7337:-587.028,0,-131.504 0/1:230:76,154:76:2995:154:6128:-482.059,0,-200.394 0/1:321:205,116:205:8102:116:4603:-317.577,0,-632.116 0/1:207:106,101:106:4222:101:3978:-295.706,0,-317.636 dDocent_Contig_1315 11 . T G 41176.9 . AB=0.0880734;ABP=1609.51;AC=3;AF=0.25;AN=12;AO=96;CIGAR=1M1X10M;DP=1568;DPB=1677.83;DPRA=1.14017;EPP=211.472;EPPR=246.215;GTI=0;LEN=1;MEANALT=7;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3791;QR=4372;RO=112;RPL=0;RPP=211.472;RPPR=246.215;RPR=96;RUN=1;SAF=96;SAP=211.472;SAR=0;SRF=112;SRP=246.215;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:209:0,0,19,183,4:0:0:0,19,183,4:0,736,6711,160:-608.913,-608.913,-608.913,-548.455,-548.455,-542.736,-60.4492,-60.4492,0,-5.36074,-595.733,-595.733,-535.274,-47.2673,-594.528 0|1:219:10,0,9,181,18:10:396:0,9,181,18:0,361,6666,709:-567.75,-570.76,-603.355,-541.015,-573.61,-570.9,-25.7306,-58.3247,-28.5784,-3.83829,-512.432,-545.028,-515.282,0,-539.609 0|0:133:8,0,1,123,0:8:314:0,1,123,0:0,40,4528,0:-379.006,-381.414,-407.239,-378.119,-403.944,-403.643,-11.0891,-37.0267,-33.7276,0,-381.414,-407.239,-403.944,-37.0267,-407.239 0|1:243:9,0,4,153,72:9:359:0,4,153,72:0,158,5537,2855:-654.659,-657.369,-686.936,-644.368,-673.935,-672.731,-205.442,-235.008,-222.008,-188.951,-422.359,-451.927,-438.925,0,-430.253 0|0:345:19,19,5,298,0:19:737:19,5,298,0:690,201,10968,0:-920.179,-869.568,-924.396,-909.334,-913.551,-968.377,-29.1502,-33.3826,-73.1392,0,-925.899,-930.116,-969.882,-89.7069,-986.446 0|0:419:66,4,0,336,2:66:2566:4,0,336,2:155,0,12348,67:-989.584,-996.718,-1206.38,-1009.45,-1207.58,-1220.31,0,-198.174,-210.908,-109.762,-1004.03,-1202.16,-1214.89,-205.485,-1214.29 dDocent_Contig_1316 98 . N A 59.0553 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.21888;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=62;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:62:-5.88849,-0.60206,0 dDocent_Contig_1317 77 . G A 782.756 . AB=0.145161;ABP=477.652;AC=3;AF=0.25;AN=12;AO=79;CIGAR=1X;DP=1058;DPB=1058;DPRA=0.629804;EPP=174.557;EPPR=2128.88;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2948;QR=36914;RO=979;RPL=79;RPP=174.557;RPPR=2128.88;RPR=0;RUN=1;SAF=79;SAP=174.557;SAR=0;SRF=979;SRP=2128.88;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:96:82,14:82:3054:14:494:-15.8807,0,-246.127 0/1:143:119,24:119:4463:24:889:-37.2762,0,-358.691 0/1:195:170,25:170:6428:25:946:-26.7282,0,-519.738 0/0:174:160,14:160:6050:14:544:0,-3.08117,-495.146 0/0:255:255,0:255:9588:0:0:0,-76.7626,-862.629 0/0:195:193,2:193:7331:2:75:0,-51.5813,-652.527 dDocent_Contig_1318 69 . T A 482.894 . AB=0.184932;ABP=128.896;AC=3;AF=0.25;AN=12;AO=27;CIGAR=1X;DP=260;DPB=260;DPRA=1.2807;EPP=61.6401;EPPR=508.963;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.888889;PAIREDR=0.969957;PAO=0;PQA=0;PQR=0;PRO=0;QA=1031;QR=8726;RO=233;RPL=27;RPP=61.6401;RPPR=508.963;RPR=0;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=233;SRP=508.963;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:23,12:23:885:12:448:-30.1197,0,-69.4305 0/1:26:21,5:21:780:5:197:-10.2785,0,-62.6911 0/0:25:25,0:25:933:0:0:0,-7.52575,-84.2773 0/0:20:20,0:20:742:0:0:0,-6.0206,-67.0969 0/0:69:69,0:69:2569:0:0:0,-20.7711,-231.402 0/1:85:75,10:75:2817:10:386:-9.50077,0,-228.089 dDocent_Contig_1319 29 . G A 34.182 . AB=0.108108;ABP=52.3673;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=182;DPB=182;DPRA=1.27586;EPP=11.6962;EPPR=389.532;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.853933;PAO=0;PQA=0;PQR=0;PRO=0;QA=161;QR=7147;RO=178;RPL=0;RPP=11.6962;RPPR=389.532;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=178;SRP=389.532;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:1007:0:0:0,-7.52575,-90.9254 0/0:32:32,0:32:1289:0:0:0,-9.63296,-116.275 0/0:26:26,0:26:1039:0:0:0,-7.82678,-93.8022 0/1:37:33,4:33:1335:4:161:-3.73679,0,-109.266 0/0:34:34,0:34:1367:0:0:0,-10.235,-123.285 0/0:28:28,0:28:1110:0:0:0,-8.42884,-100.184 dDocent_Contig_1320 98 . N C 513.075 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=16;CIGAR=1X;DP=16;DPB=16;DPRA=0;EPP=37.7539;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0.9375;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=548;QR=0;RO=0;RPL=16;RPP=37.7539;RPPR=0;RPR=0;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:68:-6.45788,-0.60206,0 1/1:12:0,12:0:0:12:410:-37.229,-3.61236,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1321 163 . G A 512.174 . AB=0.173913;ABP=172.952;AC=1;AF=0.0833333;AN=12;AO=60;CIGAR=1X;DP=734;DPB=734;DPRA=2.48374;EPP=133.299;EPPR=1455.74;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998514;PAO=0;PQA=0;PQR=0;PRO=0;QA=2187;QR=26511;RO=673;RPL=60;RPP=133.299;RPPR=1455.74;RPR=0;RUN=1;SAF=0;SAP=133.299;SAR=60;SRF=0;SRP=1464.41;SRR=673;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:97:89,8:89:3512:8:295:0,-2.30252,-289.222 0/0:188:173,15:173:6854:15:523:0,-9.21474,-569.166 0/1:184:152,32:152:5949:32:1185:-51.5361,0,-479.815 0/0:142:137,5:137:5359:5:184:0,-25.8306,-465.25 0/0:57:57,0:57:2235:0:0:0,-17.1587,-201.321 0/0:66:65,0:65:2602:0:0:0,-19.5669,-233.897 dDocent_Contig_1322 28 . C A 2080.62 . AB=0.231667;ABP=378.255;AC=2;AF=0.166667;AN=12;AO=227;CIGAR=1X2M1X2M5D1M;DP=1902;DPB=1807.42;DPRA=0.970462;EPP=495.935;EPPR=3583.77;GTI=0;LEN=1;MEANALT=3.6;MQM=31.7885;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8862;QR=64446;RO=1649;RPL=0;RPP=495.935;RPPR=3583.77;RPR=227;RUN=1;SAF=227;SAP=495.935;SAR=0;SRF=1649;SRP=3583.77;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:325:315,0:315:12283:0:0:0,-94.8244,-1104.49 0|0:443:393,46:393:15346:46:1757:0,-4.77198,-1252.54 0|0:374:344,25:344:13477:25:993:0,-40.7957,-1141.45 0|1:311:203,104:203:7953:104:4079:-197.689,0,-622.668 0|0:160:143,17:143:5552:17:669:0,-1.20248,-452.642 0|1:289:251,35:251:9835:35:1364:-11.1858,0,-798.166 dDocent_Contig_1323 160 . T A 208.302 . AB=0.189189;ABP=65.1027;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=314;DPB=314;DPRA=1.54167;EPP=33.4109;EPPR=148.962;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=479;QR=11435;RO=300;RPL=0;RPP=33.4109;RPPR=148.962;RPR=14;RUN=1;SAF=0;SAP=33.4109;SAR=14;SRF=0;SRP=654.452;SRR=300;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:40,0:40:1517:0:0:0,-12.0412,-136.779 0/0:51:51,0:51:1996:0:0:0,-15.3525,-179.844 0/0:47:47,0:47:1750:0:0:0,-14.1484,-157.732 0/0:41:41,0:41:1586:0:0:0,-12.3422,-142.98 0/1:74:60,14:60:2263:14:479:-21.149,0,-181.567 0/0:61:61,0:61:2323:0:0:0,-18.3628,-209.254 dDocent_Contig_1324 15 . T A 121.218 . AB=0.145455;ABP=63.0614;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=230;DPB=230;DPRA=0.916667;EPP=26.8965;EPPR=478.563;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=440;QR=8827;RO=219;RPL=0;RPP=26.8965;RPPR=478.563;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=219;SRP=478.563;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:29,3:29:1170:3:118:-1.36924,0,-95.9451 0/0:53:53,0:53:2134:0:0:0,-15.9546,-192.233 0/0:55:52,3:52:2089:3:121:0,-5.27645,-176.906 0/1:23:18,5:18:730:5:201:-11.5472,0,-59.0995 0/0:26:26,0:26:1048:0:0:0,-7.82678,-94.6107 0/0:41:41,0:41:1656:0:0:0,-12.3422,-149.264 dDocent_Contig_1325 28 . G T 2740.17 . AB=0.319018;ABP=95.7575;AC=2;AF=0.166667;AN=12;AO=104;CIGAR=2X;DP=517;DPB=517;DPRA=3.41361;EPP=228.843;EPPR=899.828;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4140;QR=16178;RO=413;RPL=0;RPP=228.843;RPPR=899.828;RPR=104;RUN=1;SAF=104;SAP=228.843;SAR=0;SRF=413;SRP=899.828;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:199:120,79:120:4737:79:3162:-224.746,0,-366.367 0|0:146:146,0:146:5666:0:0:0,-43.9504,-509.823 0|1:127:102,25:102:4015:25:978:-50.0855,0,-323.138 0|0:10:10,0:10:394:0:0:0,-3.0103,-35.8178 0|0:26:26,0:26:1019:0:0:0,-7.82678,-92.0028 0|0:9:9,0:9:347:0:0:0,-2.70927,-31.5803 dDocent_Contig_1326 14 . T C 79150.7 . AB=0.747829;ABP=1416.2;AC=8;AF=0.666666;AN=12;AO=2423;CIGAR=1X4M;DP=3201;DPB=3190.2;DPRA=0;EPP=5264.49;EPPR=786.912;GTI=0;LEN=1;MEANALT=9.66667;MQM=58.726;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.579034;PAIREDR=0.950139;PAO=0;PQA=0;PQR=0;PRO=0;QA=97313;QR=14295;RO=361;RPL=0;RPP=5264.49;RPPR=786.912;RPR=2423;RUN=1;SAF=2423;SAP=5264.49;SAR=0;SRF=361;SRP=786.912;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:507:67,22,6,378:67:2657:22,6,378:871,240,15163:-1224.56,-1173.04,-1385.13,-1224.96,-1371.98,-1441.86,0,-147.024,-198.941,-104.92 0|1:711:122,43,2,509:122:4861:43,2,509:1672,81,20415:-1634.78,-1534.13,-1921.47,-1664.83,-1927.74,-2064.52,0,-262.912,-393.614,-247.069 0|1:460:49,6,12,375:49:1926:6,12,375:240,479,15045:-1216.07,-1211.05,-1367.66,-1191.37,-1330.01,-1346.17,0,-138.64,-118.96,-45.5245 0|1:512:60,32,27,363:60:2367:32,27,363:1267,1071,14636:-1183.27,-1097.06,-1282.17,-1113.18,-1203.64,-1299.79,0,-90.4685,-106.585,-85.4696 1|1:459:25,21,33,356:25:978:21,33,356:831,1337,14330:-1202.26,-1141.4,-1215.48,-1099.54,-1111.55,-1170.01,-29.8474,-41.8635,0,-3.08669 1|1:552:38,21,19,442:38:1506:21,19,442:836,761,17724:-1457.33,-1399.94,-1517.58,-1406.08,-1461.2,-1524.32,-9.09475,-64.2234,-70.3627,0 dDocent_Contig_1327 18 . T C 19711.5 . AB=0.253048;ABP=1784.43;AC=6;AF=0.5;AN=12;AO=851;CIGAR=1X;DP=3363;DPB=3363;DPRA=0;EPP=1850.93;EPPR=5455.58;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998825;PAIREDR=0.998009;PAO=0;PQA=0;PQR=0;PRO=0;QA=33203;QR=98215;RO=2511;RPL=0;RPP=1850.93;RPPR=5455.58;RPR=851;RUN=1;SAF=851;SAP=1850.93;SAR=0;SRF=2511;SRP=5455.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:514:465,49:465:18132:49:1959:-21.7857,0,-1475.95 0/1:616:420,196:420:16440:196:7627:-500.701,0,-1293.08 0/1:381:301,80:301:11860:80:3079:-162.519,0,-952.009 0/1:606:462,144:462:18118:144:5631:-324.249,0,-1446.98 0/1:681:468,212:468:18260:212:8291:-540.733,0,-1437.07 0/1:565:395,170:395:15405:170:6616:-425.158,0,-1215.4 dDocent_Contig_1328 54 . C T 70.9226 . AB=0.190476;ABP=20.4855;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X1M1X;DP=270;DPB=270;DPRA=0.928571;EPP=24.725;EPPR=561.079;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.992218;PAO=0;PQA=0;PQR=0;PRO=0;QA=374;QR=9527;RO=257;RPL=10;RPP=24.725;RPPR=561.079;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=257;SRP=561.079;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:44:42,2,0:42:1544:2,0:75,0:0,-6.12498,-132.123,-12.6433,-132.725,-138.869 0|0:65:61,4,0:61:2279:4,0:153,0:0,-5.42534,-191.21,-18.3628,-192.414,-204.97 0|0:46:45,0,0:45:1649:0,0:0,0:0,-13.5463,-148.241,-13.5463,-148.241,-148.241 0|0:60:60,0,0:60:2212:0,0:0,0:0,-18.0618,-199.304,-18.0618,-199.304,-199.304 0|0:34:34,0,0:34:1284:0,0:0,0:0,-10.235,-115.854,-10.235,-115.854,-115.854 0|1:21:15,4,2:15:559:4,2:146,73:-7.41102,0,-44.5602,-5.9622,-39.801,-51.1238 dDocent_Contig_1329 98 . N G 141.499 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=140;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_1330 8 . G A 303.856 . AB=0.155039;ABP=136.345;AC=1;AF=0.0833333;AN=12;AO=34;CIGAR=1X;DP=843;DPB=843;DPRA=1.1996;EPP=76.8404;EPPR=1759.73;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1302;QR=30891;RO=809;RPL=0;RPP=76.8404;RPPR=1759.73;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=809;SRP=1759.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:109:109,0:109:4196:0:0:0,-32.8123,-377.715 0/1:129:109,20:109:4148:20:769:-30.7044,0,-334.577 0/0:106:102,4:102:3854:4:155:0,-17.5837,-332.633 0/0:186:178,8:178:6794:8:302:0,-28.4542,-583.813 0/0:139:139,0:139:5333:0:0:0,-41.8432,-479.965 0/0:174:172,2:172:6566:2:76:0,-45.1645,-583.635 dDocent_Contig_1331 94 . A T 1958.3 . AB=0.764706;ABP=23.7032;AC=8;AF=0.666667;AN=12;AO=55;CIGAR=1X3M1X;DP=67;DPB=68.2;DPRA=3.15;EPP=122.441;EPPR=0;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=0;NS=6;NUMALT=2;ODDS=0;PAIRED=0.0181818;PAIREDR=0;PAO=0;PQA=0;PQR=28.5;PRO=1.5;QA=1867;QR=0;RO=0;RPL=55;RPP=122.441;RPPR=0;RPR=0;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:14:0,8,6:0:0:8,6:278,198:-38.8945,-16.2879,-13.8796,-22.8973,0,-21.0911 1|1:18:0,18,0:0:0:18,0:609,0:-55.1307,-5.41854,0,-55.1307,-5.41854,-55.1307 1|0:20:0,18,2:0:0:18,2:601,72:-54.8652,-6.23458,-0.816036,-48.9878,0,-48.3858 1|1:6:0,6,0:0:0:6,0:207,0:-18.9682,-1.80618,0,-18.9682,-1.80618,-18.9682 1|1:5:0,5,0:0:0:5,0:172,0:-15.8185,-1.50515,0,-15.8185,-1.50515,-15.8185 0|0:4:0,0,4:0:0:0,4:0,140:-12.8997,-12.8997,-12.8997,-1.20412,-1.20412,0 dDocent_Contig_1332 17 . G C 6464.44 . AB=0.173514;ABP=1918.61;AC=2;AF=0.166667;AN=12;AO=360;CIGAR=1X;DP=5366;DPB=5366;DPRA=1.09609;EPP=784.74;EPPR=10869.1;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998801;PAO=0;PQA=0;PQR=0;PRO=0;QA=14129;QR=190477;RO=5004;RPL=0;RPP=784.74;RPPR=10869.1;RPR=360;RUN=1;SAF=360;SAP=784.74;SAR=0;SRF=5004;SRP=10869.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:753:753,0:753:28673:0:0:0,-226.676,-2578.84 0/0:959:958,0:958:36531:0:0:0,-288.387,-3285.04 0/0:737:736,1:736:28174:1:10:0,-220.859,-2532.89 0/0:848:848,0:848:32164:0:0:0,-255.273,-2892.78 0/1:1050:948,102:948:35929:102:4003:-44.2152,0,-2915.24 0/1:1019:761,257:761:29006:257:10116:-603.042,0,-2301.85 dDocent_Contig_1333 107 . N A 238.774 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=255;QR=0;RO=0;RPL=0;RPP=20.3821;RPPR=0;RPR=8;RUN=1;SAF=0;SAP=20.3821;SAR=8;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:6:0,6:0:0:6:195:-17.8687,-1.80618,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:60:-5.69857,-0.60206,0 dDocent_Contig_1334 37 . T C 2098.57 . AB=0.129984;ABP=1494.27;AC=2;AF=0.166667;AN=12;AO=249;CIGAR=1X;DP=3849;DPB=3849;DPRA=0.925439;EPP=543.707;EPPR=7820.31;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.184739;PAIREDR=0.481111;PAO=0;PQA=0;PQR=0;PRO=0;QA=10003;QR=143921;RO=3600;RPL=0;RPP=543.707;RPPR=7820.31;RPR=249;RUN=1;SAF=249;SAP=543.707;SAR=0;SRF=3600;SRP=7820.31;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:588:539,49:539:21652:49:1962:0,-0.246394,-1770 0/0:799:782,17:782:31297:17:691:0,-178.005,-2751.3 0/0:524:504,20:504:20138:20:816:0,-83.986,-1736.93 0/0:684:684,0:684:27325:0:0:0,-205.905,-2456.77 0/1:656:589,67:589:23486:67:2667:-42.6718,0,-1914.2 0/1:598:502,96:502:20023:96:3867:-167.993,0,-1620.36 dDocent_Contig_1335 67 . C T 14383.9 . AB=0.843636;ABP=567.135;AC=6;AF=0.5;AN=12;AO=464;CIGAR=1X;DP=550;DPB=550;DPRA=0;EPP=1010.57;EPPR=189.757;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.993534;PAIREDR=0.895349;PAO=0;PQA=0;PQR=0;PRO=0;QA=17854;QR=3400;RO=86;RPL=464;RPP=1010.57;RPPR=189.757;RPR=0;RUN=1;SAF=464;SAP=1010.57;SAR=0;SRF=86;SRP=189.757;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:56:10,46:10:392:46:1775:-143.127,0,-18.7759 0/1:138:34,104:34:1361:104:4045:-322.544,0,-81.2026 0/1:90:14,76:14:570:76:2946:-238.174,0,-24.5493 0/1:87:11,76:11:410:76:2913:-236.111,0,-11.0412 0/1:85:9,76:9:351:76:2866:-232.489,0,-6.35841 0/1:94:8,86:8:316:86:3309:-269.618,0,-0.507953 dDocent_Contig_1336 20 . G A 87.553 . AB=0.132075;ABP=65.3275;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1X;DP=311;DPB=311;DPRA=0.787302;EPP=44.2683;EPPR=637.08;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.421053;PAIREDR=0.633562;PAO=0;PQA=0;PQR=0;PRO=0;QA=736;QR=11728;RO=292;RPL=0;RPP=44.2683;RPPR=637.08;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=292;SRP=637.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:43:41,2:41:1642:2:82:0,-5.16461,-140.228 0/0:63:63,0:63:2542:0:0:0,-18.9649,-228.912 0/0:46:44,2:44:1762:2:65:0,-7.67518,-152.619 0/1:53:46,7:46:1832:7:274:-9.07106,0,-149.138 0/0:54:50,4:50:2022:4:152:0,-2.20914,-168.117 0/0:52:48,4:48:1928:4:163:0,-0.595132,-158.656 dDocent_Contig_1337 7 . C T 7466.56 . AB=0.132287;ABP=5986.82;AC=4;AF=0.333334;AN=12;AO=674;CIGAR=1X1M;DP=5095;DPB=5095;DPRA=0;EPP=1466.58;EPPR=6272.13;GTI=0;LEN=1;MEANALT=5.16667;MQM=28.0059;MQMR=48.9869;NS=6;NUMALT=3;ODDS=0;PAIRED=0.995549;PAIREDR=0.873753;PAO=0;PQA=0;PQR=0;PRO=0;QA=18337;QR=110990;RO=2907;RPL=0;RPP=1466.58;RPPR=6315.48;RPR=674;RUN=1;SAF=674;SAP=1466.58;SAR=0;SRF=2902;SRP=6272.13;SRR=5;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:853:495,138,113,100:495:18894:138,113,100:5237,4300,2735:-88.2164,-3.80202,-1370.42,0,-1174.75,-1374.16,-46.6771,-1221.42,-1217.63,-1424.74 0|0:974:563,129,149,104:563:21510:129,149,104:4904,5680,2864:-193.465,-134.16,-1636.47,0,-1312.38,-1496.32,-163.064,-1475.43,-1341.29,-1672.91 0|1:683:397,123,87,63:397:15181:123,87,63:4686,3320,1714:-101.804,0,-1073.6,-28.1879,-917.521,-1112.64,-102.49,-991.811,-1020.01,-1194.15 0|1:878:519,125,78,137:519:19833:125,78,137:4727,2953,3782:-107.73,-70.9466,-1495.65,-80.7739,-1350.1,-1519.65,0,-1269.33,-1279.17,-1421.11 0|1:845:427,117,132,166:427:16265:117,132,166:4467,5075,4386:-172.134,-43.7767,-1201.58,-44.122,-980.256,-1197.4,0,-936.132,-936.475,-1143.04 0|1:862:506,117,130,104:506:19307:117,130,104:4387,4946,2856:-87.3023,0,-1411.1,-23.8711,-1230.57,-1431.04,-40.6444,-1247.35,-1271.21,-1455.65 dDocent_Contig_1338 35 . C A 146.622 . AB=0.0932039;ABP=743.255;AC=1;AF=0.0833333;AN=12;AO=64;CIGAR=1X;DP=3228;DPB=3228;DPRA=0.931777;EPP=141.985;EPPR=6867.03;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999684;PAO=0;PQA=0;PQR=0;PRO=0;QA=2498;QR=126329;RO=3161;RPL=0;RPP=141.985;RPPR=6867.03;RPR=64;RUN=1;SAF=64;SAP=141.985;SAR=0;SRF=3161;SRP=6867.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:446:446,0:446:17758:0:0:0,-134.259,-1596.77 0/0:649:646,2:646:25877:2:65:0,-189.066,-2320.49 0/0:655:655,0:655:26187:0:0:0,-197.175,-2354.43 0/0:570:570,0:570:22785:0:0:0,-171.587,-2048.63 0/0:393:378,14:378:15063:14:545:0,-69.0225,-1305.09 0/1:515:466,48:466:18659:48:1888:-14.9809,0,-1522.59 dDocent_Contig_1339 36 . C A 21185.7 . AB=0.32167;ABP=697.717;AC=6;AF=0.5;AN=12;AO=809;CIGAR=1X;DP=2515;DPB=2515;DPRA=0;EPP=1759.73;EPPR=3701.03;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0.998764;PAIREDR=0.999413;PAO=0;PQA=0;PQR=0;PRO=0;QA=32001;QR=68086;RO=1703;RPL=0;RPP=1759.73;RPPR=3701.03;RPR=809;RUN=1;SAF=809;SAP=1759.73;SAR=0;SRF=1703;SRP=3701.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:361:317,44:317:12618:44:1746:-48.6867,0,-1026.05 0/1:501:391,110:391:15654:110:4361:-241.625,0,-1256.79 0/1:243:195,48:195:7850:48:1898:-97.8612,0,-632.911 0/1:373:315,58:315:12525:58:2306:-95.418,0,-1014.07 0/1:571:285,283:285:11405:283:11220:-837.65,0,-854.275 0/1:466:200,266:200:8034:266:10470:-801.324,0,-582.339 dDocent_Contig_1340 1 . N G 114.734 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.91202;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:123:-11.4648,-0.90309,0 ./.:.:.:.:.:.:.:. dDocent_Contig_1342 109 . G A 442.325 . AB=0.169014;ABP=205.691;AC=2;AF=0.166667;AN=12;AO=37;CIGAR=1X;DP=681;DPB=681;DPRA=0.929178;EPP=83.3548;EPPR=1397.1;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998442;PAO=0;PQA=0;PQR=0;PRO=0;QA=1242;QR=21456;RO=642;RPL=0;RPP=83.3548;RPPR=1397.1;RPR=37;RUN=1;SAF=0;SAP=83.3548;SAR=37;SRF=0;SRP=1397.1;SRR=642;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:84:84,0:84:2827:0:0:0,-25.2865,-254.676 0/0:91:90,0:90:3054:0:0:0,-27.0927,-274.815 0/0:178:177,0:177:5893:0:0:0,-53.2823,-530.451 0/0:115:114,1:114:3790:1:36:0,-31.0202,-337.719 0/1:111:89,22:89:2892:22:745:-33.9474,0,-227.104 0/1:102:88,14:88:3000:14:461:-11.0987,0,-239.543 dDocent_Contig_1343 98 . N T 96.0447 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=96;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:64:-6.07869,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1344 22 . A T 327.419 . AB=0.131579;ABP=227.015;AC=3;AF=0.25;AN=12;AO=32;CIGAR=1X;DP=362;DPB=362;DPRA=0;EPP=72.4974;EPPR=719.596;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.625;PAIREDR=0.575758;PAO=0;PQA=0;PQR=0;PRO=0;QA=1279;QR=13036;RO=330;RPL=0;RPP=72.4974;RPPR=719.596;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=330;SRP=719.596;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:51:49,2:49:1939:2:82:0,-7.57285,-166.933 0/0:66:62,4:62:2399:4:153:0,-5.73003,-201.929 0/1:66:58,8:58:2307:8:325:-9.75145,0,-187.924 0/1:60:52,8:52:2041:8:318:-10.9222,0,-165.82 0/1:64:55,9:55:2211:9:362:-13.6777,0,-179.892 0/0:55:54,1:54:2139:1:39:0,-12.6601,-188.787 dDocent_Contig_1345 1 . N G 218.236 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=231;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:197:-18.1055,-1.50515,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1346 8 . G A 1607.25 . AB=0.150868;ABP=796.015;AC=2;AF=0.166667;AN=12;AO=136;CIGAR=1X;DP=2344;DPB=2344;DPRA=0.760656;EPP=298.331;EPPR=4797.62;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5161;QR=84194;RO=2208;RPL=0;RPP=298.331;RPPR=4797.62;RPR=136;RUN=1;SAF=136;SAP=298.331;SAR=0;SRF=2208;SRP=4797.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:277:275,2:275:10500:2:78:0,-75.9818,-937.226 0/0:488:488,0:488:18625:0:0:0,-146.903,-1675.3 0/0:375:359,16:359:13599:16:614:0,-57.2866,-1167.72 0/1:323:276,47:276:10555:47:1781:-63.315,0,-852.324 0/1:426:360,66:360:13760:66:2514:-98.2236,0,-1109.55 0/0:455:450,5:450:17155:5:174:0,-120.971,-1527.1 dDocent_Contig_1347 19 . G T 10067.1 . AB=0.556856;ABP=19.8011;AC=6;AF=0.5;AN=12;AO=333;CIGAR=1X;DP=598;DPB=598;DPRA=0;EPP=726.111;EPPR=576.279;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.987988;PAIREDR=0.977273;PAO=0;PQA=0;PQR=0;PRO=0;QA=13219;QR=10390;RO=264;RPL=0;RPP=726.111;RPPR=576.279;RPR=333;RUN=1;SAF=333;SAP=726.111;SAR=0;SRF=264;SRP=576.279;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:83:33,49:33:1268:49:1907:-146.792,0,-89.3446 0/1:130:42,88:42:1671:88:3519:-277.621,0,-111.492 0/1:74:18,56:18:710:56:2244:-179.853,0,-41.9516 0/1:101:34,67:34:1343:67:2635:-206.888,0,-90.7342 0/1:95:78,17:78:3077:17:684:-33.2931,0,-248.431 0/1:115:59,56:59:2321:56:2230:-166.257,0,-174.454 dDocent_Contig_1348 11 . C T 87.6911 . AB=0.146341;ABP=47.552;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=476;DPB=476;DPRA=0.938272;EPP=31.2394;EPPR=1008.4;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=515;QR=18390;RO=463;RPL=0;RPP=31.2394;RPPR=1008.4;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=463;SRP=1008.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:55:55,0:55:2193:0:0:0,-16.5566,-197.544 0/0:96:96,0:96:3826:0:0:0,-28.8989,-344.348 0/1:41:35,6:35:1399:6:234:-9.08787,0,-113.826 0/0:55:55,0:55:2150:0:0:0,-16.5566,-193.676 0/0:111:104,7:104:4135:7:281:0,-7.75219,-346.469 0/0:118:118,0:118:4687:0:0:0,-35.5215,-421.756 dDocent_Contig_1350 98 . N G 737.578 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=26;CIGAR=1X;DP=26;DPB=26;DPRA=0;EPP=59.4686;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=796;QR=0;RO=0;RPL=26;RPP=59.4686;RPPR=0;RPR=0;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:43:-4.08417,-0.60206,0 1/1:1:0,1:0:0:1:10:-0.999996,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:21:0,21:0:0:21:673:-60.8715,-6.32163,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_1351 16 . T C 150296 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=4294;CIGAR=1X;DP=4423;DPB=4423;DPRA=0;EPP=9327.31;EPPR=283.13;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0.998836;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=172340;QR=5158;RO=129;RPL=0;RPP=9327.31;RPPR=283.13;RPR=4294;RUN=1;SAF=4294;SAP=9327.31;SAR=0;SRF=129;SRP=283.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:683:24,659:24:943:659:26510:-2298.3,-120.44,0 1/1:863:15,848:15:599:848:34106:-3012.01,-205.541,0 1/1:434:6,428:6:246:428:17211:-1524.99,-108.127,0 1/1:850:38,812:38:1536:812:32516:-2784.9,-117.4,0 1/1:812:46,766:46:1834:766:30670:-2592.17,-79.1719,0 1/1:781:0,781:0:0:781:31327:-2816.47,-235.104,0 dDocent_Contig_1352 20 . A G 18115.4 . AB=0.801128;ABP=561.434;AC=6;AF=0.5;AN=12;AO=568;CIGAR=1X;DP=709;DPB=709;DPRA=0;EPP=1236.41;EPPR=309.188;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.680851;PAO=0;PQA=0;PQR=0;PRO=0;QA=22543;QR=5575;RO=141;RPL=0;RPP=1236.41;RPPR=309.188;RPR=568;RUN=1;SAF=568;SAP=1236.41;SAR=0;SRF=141;SRP=309.188;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:83:19,64:19:740:64:2574:-206.798,0,-41.9349 0/1:139:45,94:45:1772:94:3734:-294.235,0,-117.856 0/1:74:17,57:17:669:57:2256:-180.926,0,-38.2604 0/1:59:15,44:15:596:44:1746:-139.597,0,-36.2174 0/1:173:22,151:22:880:151:5946:-482.872,0,-27.4323 0/1:181:23,158:23:918:158:6287:-511.108,0,-28.4407 dDocent_Contig_1353 13 . C T 3540.46 . AB=0.188635;ABP=1069.93;AC=4;AF=0.333333;AN=12;AO=275;CIGAR=1X;DP=1988;DPB=1988;DPRA=0;EPP=600.165;EPPR=3716.23;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.989091;PAIREDR=0.994152;PAO=0;PQA=0;PQR=0;PRO=0;QA=9427;QR=68266;RO=1710;RPL=0;RPP=600.165;RPPR=3716.23;RPR=275;RUN=1;SAF=275;SAP=600.165;SAR=0;SRF=1710;SRP=3716.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:420:397,23:397:15840:23:791:0,-54.9317,-1352.86 0/1:422:352,69:352:14078:69:2333:-83.0813,0,-1138.8 0/1:176:147,29:147:5874:29:1028:-39.8475,0,-475.453 0/0:301:286,13:286:11373:13:448:0,-49.5309,-982.166 0/1:339:249,90:249:9929:90:3056:-173.206,0,-790.928 0/1:330:279,51:279:11172:51:1771:-60.3169,0,-905.334 dDocent_Contig_1354 1 . N G 463.939 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=13;CIGAR=1X;DP=13;DPB=13;DPRA=0;EPP=31.2394;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=492;QR=0;RO=0;RPL=0;RPP=31.2394;RPPR=0;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:110:-10.2609,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:156:-14.4164,-1.20412,0 1/1:5:0,5:0:0:5:185:-17.0076,-1.50515,0 dDocent_Contig_1355 21 . C T 1322.15 . AB=0.23221;ABP=169.319;AC=4;AF=0.333333;AN=12;AO=65;CIGAR=1X;DP=449;DPB=449;DPRA=1.24839;EPP=144.156;EPPR=836.856;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.984615;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2492;QR=15118;RO=384;RPL=0;RPP=144.156;RPPR=836.856;RPR=65;RUN=1;SAF=65;SAP=144.156;SAR=0;SRF=384;SRP=836.856;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:78:70,8:70:2773:8:306:-4.41723,0,-226.219 0/0:120:117,3:117:4593:3:118:0,-25.1207,-402.325 0/1:74:50,24:50:1964:24:922:-61.0139,0,-154.693 0/0:62:62,0:62:2431:0:0:0,-18.6639,-218.953 0/1:66:48,18:48:1885:18:690:-42.5569,0,-149.993 0/1:49:37,12:37:1472:12:456:-26.632,0,-117.979 dDocent_Contig_1356 16 . G C 410.33 . AB=0.124204;ABP=388.177;AC=1;AF=0.0833333;AN=12;AO=57;CIGAR=1X;DP=1595;DPB=1595;DPRA=1.52876;EPP=126.784;EPPR=3338.39;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2201;QR=59880;RO=1536;RPL=0;RPP=126.784;RPPR=3338.39;RPR=57;RUN=1;SAF=57;SAP=126.784;SAR=0;SRF=1536;SRP=3338.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:274:274,0:274:10740:0:0:0,-82.4822,-965.978 0/0:262:262,0:262:10174:0:0:0,-78.8699,-915.109 0/0:132:131,0:131:5032:0:0:0,-39.4349,-452.391 0/0:236:236,0:236:9114:0:0:0,-71.0431,-819.818 0/0:377:358,18:358:14034:18:694:0,-50.8047,-1199.32 0/1:314:275,39:275:10786:39:1507:-41.3518,0,-875.56 dDocent_Contig_1357 98 . N G 344.391 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=13;CIGAR=1X;DP=13;DPB=13;DPRA=0;EPP=31.2394;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=353;QR=0;RO=0;RPL=13;RPP=31.2394;RPPR=0;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:30:-2.99957,-0.30103,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:6:0,6:0:0:6:133:-12.1896,-1.80618,0 1/1:2:0,2:0:0:2:64:-6.07855,-0.60206,0 1/1:2:0,2:0:0:2:58:-5.50886,-0.60206,0 dDocent_Contig_1358 43 . G C 379.356 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=7;CIGAR=1X3M13D1M;DP=358;DPB=352.833;DPRA=0.932331;EPP=18.2106;EPPR=700.053;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.857143;PAIREDR=0.330218;PAO=0;PQA=0;PQR=0;PRO=0;QA=242;QR=12478;RO=321;RPL=0;RPP=18.2106;RPPR=700.053;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=321;SRP=700.053;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:50:47,0,0:47:1845:0,0:0,0:0,-14.1484,-165.985,-14.1484,-165.985,-165.985 0|0:83:80,0,0:80:3084:0,0:0,0:0,-24.0824,-277.32,-24.0824,-277.32,-277.32 0|0:65:60,4,0:60:2332:4,0:122,0:0,-8.37896,-198.775,-18.0618,-199.979,-209.74 0|0:59:55,3,0:55:2146:3,0:120,0:0,-6.67162,-182.162,-16.5566,-183.065,-192.951 0|0:50:34,0,14:34:1304:0,14:0,557:-35.8029,-46.0379,-153.072,0,-107.205,-102.99 0|0:51:45,0,5:45:1767:0,5:0,199:-2.94582,-16.4922,-161.838,0,-145.452,-143.947 dDocent_Contig_1359 38 . A G 1019.08 . AB=0.180328;ABP=273.732;AC=2;AF=0.166667;AN=12;AO=60;CIGAR=1X;DP=865;DPB=865;DPRA=1.28719;EPP=133.299;EPPR=1751.05;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9901;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2352;QR=31718;RO=805;RPL=0;RPP=133.299;RPPR=1751.05;RPR=60;RUN=1;SAF=60;SAP=133.299;SAR=0;SRF=805;SRP=1751.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:143:139,4:139:5543:4:156:0,-28.6318,-484.291 0/0:175:174,1:174:6841:1:41:0,-48.5857,-611.318 0/1:138:125,13:125:4905:13:521:-5.69259,0,-399.822 0/0:147:147,0:147:5769:0:0:0,-44.2514,-519.037 0/1:167:125,42:125:4938:42:1634:-97.0294,0,-394.04 0/0:95:95,0:95:3722:0:0:0,-28.5978,-335.008 dDocent_Contig_1360 48 . C A 2799.83 . AB=0.597403;ABP=15.7007;AC=4;AF=0.333333;AN=12;AO=92;CIGAR=1X;DP=323;DPB=323;DPRA=0.455621;EPP=202.786;EPPR=504.62;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3639;QR=9123;RO=231;RPL=0;RPP=202.786;RPPR=504.62;RPR=92;RUN=1;SAF=92;SAP=202.786;SAR=0;SRF=231;SRP=504.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:27,3:27:1075:3:119:-2.06411,0,-88.0122 0/1:84:15,69:15:598:69:2715:-219.198,0,-28.8723 0/1:15:8,7:8:314:7:277:-20.7808,0,-24.1097 0/1:25:12,13:12:475:13:528:-40.3409,0,-35.5738 0/0:125:125,0:125:4912:0:0:0,-37.6287,-442.01 0/0:44:44,0:44:1749:0:0:0,-13.2453,-157.625 dDocent_Contig_1361 17 . C T 54733.2 . AB=0.511023;ABP=6.98355;AC=6;AF=0.5;AN=12;AO=1924;CIGAR=1X2M8I2M;DP=3765;DPB=6861;DPRA=0;EPP=4180.92;EPPR=3946.4;GTI=0;LEN=1;MEANALT=4.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.99896;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=73419;QR=71300;RO=1816;RPL=0;RPP=4180.92;RPPR=3946.4;RPR=1924;RUN=1;SAF=1924;SAP=4180.92;SAR=0;SRF=1816;SRP=3946.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:459:236,219:236:9264:219:8363:-615.201,0,-696.045 0|1:521:359,157:359:14101:157:5993:-383.653,0,-1112.52 0|1:498:322,171:322:12648:171:6533:-439.152,0,-988.811 0|1:401:236,165:236:9339:165:6326:-448.552,0,-719.316 0|1:922:326,591:326:12805:591:22512:-1748.51,0,-875.302 0|1:964:337,621:337:13143:621:23692:-1842.25,0,-893.345 dDocent_Contig_1362 21 . A T 873.696 . AB=0.211765;ABP=187.023;AC=2;AF=0.166667;AN=12;AO=65;CIGAR=1X;DP=917;DPB=917;DPRA=1.08884;EPP=144.156;EPPR=1850.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2156;QR=33032;RO=851;RPL=0;RPP=144.156;RPPR=1850.93;RPR=65;RUN=1;SAF=65;SAP=144.156;SAR=0;SRF=851;SRP=1850.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:114:86,28:86:3319:28:925:-49.2324,0,-264.488 0/0:223:212,11:212:8315:11:330:0,-37.1462,-717.982 0/1:141:115,26:115:4462:26:901:-38.9508,0,-359.116 0/0:247:246,0:246:9490:0:0:0,-74.0534,-853.26 0/0:83:83,0:83:3221:0:0:0,-24.9855,-289.98 0/0:109:109,0:109:4225:0:0:0,-32.8123,-380.254 dDocent_Contig_1363 14 . G T 875.524 . AB=0.0486486;ABP=330.363;AC=0;AF=0;AN=12;AO=9;CIGAR=1X3M2X4M1D1X3M1X2M2X2M;DP=467;DPB=466;DPRA=0;EPP=22.5536;EPPR=363.475;GTI=0;LEN=1;MEANALT=7;MQM=5;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=0;PAIREDR=0.981928;PAO=0;PQA=0;PQR=0;PRO=0;QA=45;QR=6460;RO=166;RPL=0;RPP=22.5536;RPPR=363.475;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=166;SRP=363.475;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:49:23,1,0,0,4,10,3,1,0,4:23:897:1,0,0,4,10,3,1,0,4:5,0,0,76,131,51,36,0,144:-3.98025,-10.964,-84.5022,-10.9039,-84.8032,-84.7435,-10.9039,-84.8032,-84.7435,-84.7435,-6.34204,-80.2515,-80.1911,-80.1911,-78.987,-4.75002,-78.6576,-78.5955,-78.5955,-74.0506,-75.5852,-8.02075,-81.9262,-81.866,-81.866,-77.315,-75.7238,-80.9629,-8.22909,-82.1339,-82.0741,-82.0741,-77.5218,-75.9269,-79.1967,-81.7731,-10.9039,-84.8032,-84.7435,-84.7435,-80.1911,-78.5955,-81.866,-82.0741,-84.7435,0,-73.9254,-73.8653,-73.8653,-69.3133,-67.7204,-70.9882,-71.1957,-73.8653,-72.6612 0|0:77:44,4,0,0,17,7,0,0,1,1:44:1714:4,0,0,17,7,0,0,1,1:20,0,0,317,116,0,0,36,35:-5.62794,-19.1079,-158.909,-18.8733,-160.113,-159.88,-18.8733,-160.113,-159.88,-159.88,0,-141.297,-141.058,-141.058,-135.94,-12.4043,-153.659,-153.424,-153.424,-134.611,-151.317,-18.8733,-160.113,-159.88,-159.88,-141.058,-153.424,-159.88,-18.8733,-160.113,-159.88,-159.88,-141.058,-153.424,-159.88,-159.88,-16.0589,-157.304,-157.071,-157.071,-138.249,-150.616,-157.071,-157.071,-156.77,-16.2896,-157.535,-157.302,-157.302,-138.48,-150.846,-157.302,-157.302,-154.493,-157.001 0|0:59:27,4,0,0,13,11,0,2,1,0:27:1055:4,0,0,13,11,0,2,1,0:20,0,0,246,184,0,72,33,0:-6.61491,-14.9792,-100.618,-14.7427,-101.822,-101.586,-14.7427,-101.822,-101.586,-101.586,0,-87.1214,-86.8777,-86.8777,-82.9643,-4.42175,-91.5289,-91.2864,-91.2864,-76.5973,-87.9751,-14.7427,-101.822,-101.586,-101.586,-86.8777,-91.2864,-101.586,-9.39464,-96.4839,-96.2477,-96.2477,-81.5397,-85.9484,-96.2477,-95.6457,-12.3398,-99.4235,-99.1875,-99.1875,-84.4793,-88.888,-99.1875,-93.8489,-98.8865,-14.7427,-101.822,-101.586,-101.586,-86.8777,-91.2864,-101.586,-96.2477,-99.1875,-101.586 0|0:113:42,0,0,0,9,42,0,9,5,0:42:1621:0,0,0,9,42,0,9,5,0:0,0,0,187,675,0,309,191,0:-24.2822,-36.9254,-170.118,-36.9254,-170.118,-170.118,-36.9254,-170.118,-170.118,-170.118,-25.2243,-158.424,-158.424,-158.424,-155.714,0,-133.197,-133.197,-133.197,-121.518,-120.554,-36.9254,-170.118,-170.118,-170.118,-158.424,-133.197,-170.118,-13.8614,-147.069,-147.069,-147.069,-135.375,-110.155,-147.069,-144.36,-22.0575,-155.259,-155.259,-155.259,-143.565,-118.341,-155.259,-132.209,-153.754,-36.9254,-170.118,-170.118,-170.118,-158.424,-133.197,-170.118,-147.069,-155.259,-170.118 0|0:77:13,0,8,6,13,21,5,0,7,2:13:510:0,8,6,13,21,5,0,7,2:0,315,240,246,359,125,0,279,79:-17.2562,-21.1696,-63.144,-8.5019,-50.4803,-48.072,-12.0217,-53.9988,-41.3357,-52.1927,-6.44273,-48.4216,-35.7606,-39.2785,-44.5082,-0.803981,-42.7838,-30.127,-33.6438,-28.079,-36.4622,-12.7746,-54.7515,-42.0882,-45.6067,-40.0306,-34.3951,-53.2464,-21.1696,-63.144,-50.4803,-53.9988,-48.4216,-42.7838,-54.7515,-63.144,0,-41.9815,-29.3163,-32.8353,-27.2578,-21.6203,-33.5881,-41.9815,-39.8743,-15.1557,-57.1318,-44.4678,-47.9865,-42.4092,-36.7715,-48.7392,-57.1318,-35.9686,-56.5298 0|0:92:17,0,0,0,35,20,0,4,7,3:17:663:0,0,0,35,20,0,4,7,3:0,0,0,654,353,0,133,260,118:-33.7768,-38.8943,-93.4257,-38.8943,-93.4257,-93.4257,-38.8943,-93.4257,-93.4257,-93.4257,0,-54.5403,-54.5403,-54.5403,-44.0043,-18.5091,-73.0452,-73.0452,-73.0452,-34.2106,-67.0246,-38.8943,-93.4257,-93.4257,-93.4257,-54.5403,-73.0452,-93.4257,-28.9389,-83.473,-83.473,-83.473,-44.5892,-63.093,-83.473,-82.2689,-18.996,-73.5332,-73.5332,-73.5332,-34.6484,-53.1526,-73.5332,-63.5798,-71.426,-29.8985,-84.4323,-84.4323,-84.4323,-45.5469,-64.0517,-84.4323,-74.4793,-64.5392,-83.5292 dDocent_Contig_1364 44 . G T 1901.23 . AB=0.365079;ABP=32.8939;AC=2;AF=0.166667;AN=12;AO=69;CIGAR=1X;DP=591;DPB=591;DPRA=0.940299;EPP=152.842;EPPR=1110.61;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2748;QR=20477;RO=522;RPL=0;RPP=152.842;RPPR=1110.61;RPR=69;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=522;SRP=1136.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:101:101,0:101:3948:0:0:0,-30.404,-355.34 0/0:137:137,0:137:5393:0:0:0,-41.2411,-485.237 0/0:79:79,0:79:3091:0:0:0,-23.7814,-278.289 0/0:85:85,0:85:3323:0:0:0,-25.5875,-299.149 0/1:102:61,41:61:2383:41:1643:-117.394,0,-183.932 0/1:87:59,28:59:2339:28:1105:-73.5428,0,-184.49 dDocent_Contig_1365 23 . A T 2351.38 . AB=0.206439;ABP=398.235;AC=1;AF=0.0833333;AN=12;AO=147;CIGAR=1X;DP=2666;DPB=2666;DPRA=1.31826;EPP=322.217;EPPR=5464.26;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998807;PAO=0;PQA=0;PQR=0;PRO=0;QA=5926;QR=100757;RO=2515;RPL=0;RPP=322.217;RPPR=5464.26;RPR=147;RUN=1;SAF=147;SAP=322.217;SAR=0;SRF=2515;SRP=5464.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:384:382,0:382:15230:0:0:0,-114.993,-1369.09 0/0:498:492,6:492:19698:6:246:0,-127.393,-1748.64 0/0:308:307,0:307:12340:0:0:0,-92.4162,-1109.26 0/0:458:457,0:457:18355:0:0:0,-137.571,-1649.97 0/0:490:458,32:458:18334:32:1297:0,-30.5125,-1531.54 0/1:528:419,109:419:16800:109:4383:-235.457,0,-1351.68 dDocent_Contig_1366 70 . T G 864.063 . AB=0.196296;ABP=219.321;AC=5;AF=0.416667;AN=12;AO=57;CIGAR=1X;DP=333;DPB=333;DPRA=0;EPP=126.784;EPPR=600.165;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.8421;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.912281;PAIREDR=0.730909;PAO=0;PQA=0;PQR=0;PRO=0;QA=2012;QR=9204;RO=275;RPL=57;RPP=126.784;RPPR=600.165;RPR=0;RUN=1;SAF=57;SAP=126.784;SAR=0;SRF=275;SRP=600.165;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:63:59,4:59:1994:4:140:0,-6.01996,-166.775 0/1:66:58,8:58:1912:8:279:-5.57244,0,-152.471 0/1:66:60,6:60:2003:6:220:-0.287482,0,-160.655 0/1:48:38,10:38:1296:10:346:-17.0191,0,-102.481 0/1:34:23,11:23:748:11:379:-24.2071,0,-57.3837 0/1:56:37,18:37:1251:18:648:-41.9911,0,-96.2323 dDocent_Contig_1367 30 . G A 1863.48 . AB=0.188912;ABP=412.375;AC=2;AF=0.166667;AN=12;AO=107;CIGAR=1X;DP=1684;DPB=1684;DPRA=0.642469;EPP=235.358;EPPR=3427.42;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4270;QR=62927;RO=1577;RPL=0;RPP=235.358;RPPR=3427.42;RPR=107;RUN=1;SAF=107;SAP=235.358;SAR=0;SRF=1577;SRP=3427.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:240:236,4:236:9347:4:160:0,-57.4634,-825.882 0/1:293:266,27:266:10707:27:1085:-9.731,0,-874.665 0/1:194:129,65:129:5157:65:2619:-177.431,0,-405.581 0/0:220:209,11:209:8345:11:406:0,-29.3531,-713.694 0/0:331:331,0:331:13194:0:0:0,-99.6409,-1186.46 0/0:406:406,0:406:16177:0:0:0,-122.218,-1454.62 dDocent_Contig_1368 8 . G T 130286 . AB=0.194559;ABP=985.957;AC=2;AF=0.166667;AN=12;AO=563;CIGAR=2X;DP=5675;DPB=5685;DPRA=0;EPP=1225.55;EPPR=335.246;GTI=0;LEN=1;MEANALT=5.66667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.994671;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=17942;QR=3190;RO=153;RPL=0;RPP=1225.55;RPPR=335.246;RPR=563;RUN=1;SAF=563;SAP=1225.55;SAR=0;SRF=153;SRP=335.246;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:912:27,74,4,797:27:589:74,4,797:2314,121,23692:-2078.49,-1900.73,-1923.33,-2076.94,-1935.93,-2120.61,-195.064,-53.9845,-230.241,0 0|0:1577:44,83,18,1419:44:896:83,18,1419:2642,630,42047:-3702.19,-3502.75,-3545.16,-3664.2,-3518.9,-3726.17,-359.802,-214.443,-375.913,0 0|0:750:22,61,2,660:22:465:61,2,660:1982,48,20233:-1778.37,-1625.06,-1641.92,-1781.28,-1656.57,-1815.9,-163.479,-38.6782,-194.965,0 0|0:1223:38,109,15,1050:38:803:109,15,1050:3507,548,31481:-2759.9,-2488.66,-2516.67,-2726.57,-2504.72,-2782.88,-255.281,-33.3673,-271.309,0 1|0:577:12,109,34,416:12:235:109,34,416:3500,1283,12819:-1288.9,-1010.46,-995.185,-1187.37,-922.85,-1194.67,-264.517,0,-176.888,-156.815 1|0:636:10,127,28,461:10:202:127,28,461:3997,1003,13974:-1421.53,-1103.19,-1080.13,-1342.76,-1036.58,-1349.49,-306.188,0,-239.562,-182.575 dDocent_Contig_1369 14 . T C 9585.16 . AB=0.08933;ABP=593.354;AC=0;AF=0;AN=12;AO=36;CIGAR=6M1X5M;DP=615;DPB=649;DPRA=0;EPP=81.1833;EPPR=443.819;GTI=0;LEN=1;MEANALT=5.25;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.972222;PAIREDR=0.995074;PAO=0;PQA=0;PQR=0;PRO=0;QA=1408;QR=7984;RO=203;RPL=0;RPP=81.1833;RPPR=443.819;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=203;SRP=443.819;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:88:22,56,5,1:22:871:56,5,1:2129,179,41:-168,0,-54.8599,-160.029,-57.1275,-230.217,-171.238,-68.3326,-228.338,-242.63 0|0:111:27,66,0,11:27:1060:66,0,11:2472,0,432:-194.325,0,-67.3241,-202.453,-87.1921,-289.637,-166.923,-51.6621,-254.108,-250.797 0|0:88:24,32,14,11:24:949:32,14,11:1228,537,430:-93.5697,0,-68.4699,-56.7174,-34.0277,-130.606,-65.4447,-42.7543,-99.4711,-140.236 0|0:116:35,64,1,13:35:1387:64,1,13:2355,37,505:-181.994,0,-94.9165,-189.504,-111.156,-303.377,-151.034,-72.6899,-262.184,-261.298 0|0:115:44,70,0,0:44:1733:70,0,0:2643,0,0:-203.553,0,-121.697,-216.798,-142.769,-359.375,-216.798,-142.769,-359.375,-359.375 0|0:97:51,45,0,0:51:1984:45,0,0:1668,0,0:-121.071,0,-149.474,-136.424,-163.02,-299.473,-136.424,-163.02,-299.473,-299.473 dDocent_Contig_1370 12 . T C 568.213 . AB=0.0869565;ABP=71.1757;AC=0;AF=0;AN=12;AO=4;CIGAR=2X;DP=234;DPB=234;DPRA=1.1405;EPP=11.6962;EPPR=448.162;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.985366;PAO=0;PQA=0;PQR=0;PRO=0;QA=158;QR=8065;RO=205;RPL=0;RPP=11.6962;RPPR=448.162;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=205;SRP=448.162;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:35:28,0,7:28:1110:0,7:0,280:-15.0351,-23.464,-114.825,0,-91.7594,-89.6522 0|0:45:45,0,0:45:1778:0,0:0,0:0,-13.5463,-160.239,-13.5463,-160.239,-160.239 0|0:30:30,0,0:30:1185:0,0:0,0:0,-9.0309,-106.932,-9.0309,-106.932,-106.932 0|0:46:46,0,0:46:1790:0,0:0,0:0,-13.8474,-161.322,-13.8474,-161.322,-161.322 0|0:46:28,4,14:28:1106:4,14:158,565:-38.1533,-33.5825,-123.373,0,-77.9988,-86.786 0|0:32:28,0,4:28:1096:0,4:0,161:-5.24231,-13.6712,-103.77,0,-90.4991,-89.2949 dDocent_Contig_1371 45 . T C 3075.41 . AB=0.0705882;ABP=139.149;AC=0;AF=0;AN=12;AO=6;CIGAR=10M1X2M;DP=196;DPB=170.462;DPRA=0;EPP=16.0391;EPPR=172.385;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.769231;PAO=0;PQA=0;PQR=0;PRO=0;QA=234;QR=3080;RO=78;RPL=0;RPP=16.0391;RPPR=172.385;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=78;SRP=172.385;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:25:12,13,0:12:475:13,0:484,0:-36.3722,0,-35.5765,-39.9845,-39.4899,-79.0903 0|0:33:17,15,0:17:669:15,0:562,0:-40.9157,0,-50.5397,-46.0332,-55.0552,-101.076 0|0:32:7,20,5:7:279:20,5:724,205:-56.9473,0,-16.949,-42.1246,-6.04445,-63.605 0|0:27:8,19,0:8:318:19,0:690,0:-54.2883,0,-20.8596,-56.6965,-26.5791,-82.8887 0|0:26:13,12,0:13:510:12,0:458,0:-33.9031,0,-38.5806,-37.8165,-42.193,-79.7723 0|0:53:21,31,1:21:829:31,1:1164,29:-89.1117,0,-58.981,-93.1273,-66.009,-161.047 dDocent_Contig_1372 16 . A T 44.9474 . AB=0.0883978;ABP=269.358;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=2M1X3M;DP=1097;DPB=1100.83;DPRA=0.358179;EPP=37.7539;EPPR=2285.23;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.978116;PAO=0;PQA=0;PQR=0;PRO=0;QA=649;QR=41705;RO=1051;RPL=0;RPP=37.7539;RPPR=2285.23;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=1051;SRP=2285.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:158:143,13,0:143:5651:13,0:527,0:-0.415802,0,-461.088,-43.4631,-465.002,-508.461 0|0:394:389,3,0:389:15431:3,0:120,0:0,-107.129,-1376.58,-117.101,-1377.49,-1387.37 0|0:158:151,7,0:151:6036:7,0:250,0:0,-24.7294,-520.199,-45.4555,-522.306,-542.673 0|0:206:206,0,0:206:8184:0,0:0,0:0,-62.0122,-736.165,-62.0122,-736.165,-736.165 0|1:88:78,0,8:78:3068:0,8:0,325:-3.56991,-27.0502,-279.449,0,-252.642,-250.233 0|1:93:84,0,8:84:3335:0,8:0,324:-1.70081,-26.9873,-301.557,0,-274.839,-272.431 dDocent_Contig_1373 26 . C A 94.0797 . AB=0.115789;ABP=124.818;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=1075;DPB=1075;DPRA=0.484694;EPP=26.8965;EPPR=2309.11;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.909091;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=422;QR=42534;RO=1062;RPL=0;RPP=26.8965;RPPR=2309.11;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=1062;SRP=2309.11;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:237:236,0:236:9462:0:0:0,-71.0431,-850.568 0/0:284:283,0:283:11387:0:0:0,-85.1915,-1023.58 0/0:74:74,0:74:2918:0:0:0,-22.2762,-262.702 0/0:260:260,0:260:10403:0:0:0,-78.2678,-935.557 0/0:125:125,0:125:4985:0:0:0,-37.6287,-448.518 0/1:95:84,11:84:3379:11:422:-9.72673,0,-275.551 dDocent_Contig_1374 24 . C G 365.011 . AB=0.128205;ABP=283.965;AC=2;AF=0.166667;AN=12;AO=47;CIGAR=1X;DP=771;DPB=771;DPRA=0.960227;EPP=105.07;EPPR=1572.98;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.957447;PAIREDR=0.982019;PAO=0;PQA=0;PQR=0;PRO=0;QA=1873;QR=29053;RO=723;RPL=0;RPP=105.07;RPPR=1572.98;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=723;SRP=1572.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:84:70,13:70:2810:13:513:-21.1204,0,-227.603 0/1:150:133,17:133:5358:17:678:-16.1942,0,-436.885 0/0:105:97,8:97:3913:8:326:0,-1.89828,-322.438 0/0:168:159,9:159:6389:9:356:0,-18.1715,-542.323 0/0:116:116,0:116:4660:0:0:0,-34.9195,-419.289 0/0:148:148,0:148:5923:0:0:0,-44.5524,-532.852 dDocent_Contig_1375 1 . N G 111.036 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.91202;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=119;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:119:-11.095,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1376 197 . G A 479.945 . AB=0.367347;ABP=10.4997;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=243;DPB=243;DPRA=1.26289;EPP=42.0968;EPPR=491.592;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=697;QR=8588;RO=225;RPL=18;RPP=42.0968;RPPR=491.592;RPR=0;RUN=1;SAF=0;SAP=42.0968;SAR=18;SRF=0;SRP=491.592;SRR=225;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:772:0:0:0,-6.0206,-69.808 0/0:66:66,0:66:2515:0:0:0,-19.868,-226.552 0/0:55:55,0:55:2104:0:0:0,-16.5566,-189.589 0/0:27:27,0:27:1027:0:0:0,-8.12781,-92.7382 0/0:26:26,0:26:998:0:0:0,-7.82678,-90.1313 0/1:49:31,18:31:1172:18:697:-48.3133,0,-91.0223 dDocent_Contig_1377 52 . C T 33.7713 . AB=0.111111;ABP=50.3001;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=318;DPB=318;DPRA=1.21212;EPP=16.0391;EPPR=680.51;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.573718;PAO=0;PQA=0;PQR=0;PRO=0;QA=232;QR=11677;RO=312;RPL=4;RPP=4.45795;RPPR=5.26529;RPR=2;RUN=1;SAF=4;SAP=4.45795;SAR=2;SRF=165;SRP=5.26529;SRR=147;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:32,4:32:1216:4:154:-3.39468,0,-98.8812 0/0:59:59,0:59:2237:0:0:0,-17.7608,-201.534 0/0:24:24,0:24:897:0:0:0,-7.22472,-81.0396 0/0:84:82,2:82:3026:2:78:0,-17.8832,-265.1 0/0:54:54,0:54:2041:0:0:0,-16.2556,-183.909 0/0:61:61,0:61:2260:0:0:0,-18.3628,-203.61 dDocent_Contig_1379 12 . C G 23275.1 . AB=0.735692;ABP=466.7;AC=8;AF=0.666667;AN=12;AO=707;CIGAR=1X3M;DP=961;DPB=961;DPRA=0;EPP=1538.24;EPPR=461.191;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=28314;QR=8445;RO=211;RPL=0;RPP=1538.24;RPPR=461.191;RPR=707;RUN=1;SAF=707;SAP=1538.24;SAR=0;SRF=211;SRP=461.191;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:143:22,2,119:22:882:2,119:78,4782:-387.435,-387.647,-459.712,0,-66.2669,-36.8545 0|1:219:35,0,184:35:1410:0,184:0,7372:-597.168,-607.704,-723.921,0,-116.619,-61.2295 0|1:135:36,3,94:36:1437:3,94:112,3787:-301.296,-302.966,-420.408,0,-109.19,-90.0593 0|1:247:108,4,133:108:4313:4,133:158,5287:-402.759,-422.268,-776.296,0,-342.263,-315.228 1|1:103:0,10,92:0:0:10,92:402,3680:-336.237,-303.108,-300.098,-33.1298,0,-5.43507 1|1:114:10,19,85:10:403:19,85:756,3406:-306.608,-247.372,-274.87,-29.0252,0,-36.6566 dDocent_Contig_1380 12 . C T 7654.23 . AB=0.037037;ABP=1108.85;AC=6;AF=0.5;AN=12;AO=22;CIGAR=5M5I1M1X;DP=1260;DPB=1515;DPRA=0;EPP=50.7827;EPPR=1514.36;GTI=0;LEN=1;MEANALT=8.66667;MQM=60;MQMR=60;NS=6;NUMALT=7;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=853;QR=26758;RO=696;RPL=0;RPP=50.7827;RPPR=1514.36;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=696;SRP=1514.36;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:249:189,11,1,6,29,0,5,0:189:7289:11,1,6,29,0,5,0:436,40,236,1145,0,200,0:-37.3229,-58.3285,-653.576,-90.9224,-653.592,-689.18,-74.8041,-637.473,-670.068,-671.557,0,-562.668,-595.262,-579.144,-589.828,-94.2176,-656.887,-689.481,-673.363,-598.558,-692.777,-77.7418,-640.412,-673.006,-656.887,-582.082,-676.301,-674.796,-94.2176,-656.887,-689.481,-673.363,-598.558,-692.777,-676.301,-692.777 0|1:238:109,14,0,94,8,1,0,3:109:4191:14,0,94,8,1,0,3:556,0,3710,311,40,0,115:-272.461,-259.499,-599.352,-305.273,-603.567,-649.341,0,-298.294,-344.07,-315.773,-279.72,-578.013,-623.787,-318.516,-621.379,-301.978,-600.271,-646.046,-340.775,-620.492,-645.745,-305.273,-603.567,-649.341,-344.07,-623.787,-646.046,-649.341,-295.836,-594.13,-639.904,-334.633,-614.35,-636.609,-639.904,-639.001 0|1:148:76,0,0,18,16,5,9,18:76:2905:0,0,18,16,5,9,18:0,0,717,634,197,360,698:-36.1663,-59.0446,-297.402,-59.0446,-297.402,-297.402,0,-238.357,-238.357,-232.939,-6.85878,-245.216,-245.216,-186.17,-240.399,-42.8373,-281.195,-281.195,-222.15,-229.008,-279.689,-29.3882,-267.746,-267.746,-208.7,-215.559,-251.538,-265.036,-1.70441,-240.059,-240.059,-181.014,-187.873,-223.852,-210.403,-234.641 0|1:208:76,1,0,94,13,8,0,1:76:2923:1,0,94,13,8,0,1:38,0,3686,515,320,0,40:-280.239,-300.001,-539.675,-303.117,-539.976,-543.092,0,-236.855,-239.971,-211.674,-260.727,-497.585,-500.702,-197.58,-496.788,-276.756,-513.614,-516.731,-213.61,-474.341,-514.323,-303.117,-539.976,-543.092,-239.971,-500.702,-516.731,-543.092,-299.822,-536.68,-539.797,-236.676,-497.407,-513.436,-539.797,-539.496 0|1:193:111,10,2,13,35,11,0,0:111:4287:10,2,13,35,11,0,0:394,78,517,1377,432,0,0:-79.8548,-80.8542,-429.933,-106.858,-426.531,-458.345,-70.7002,-390.374,-416.378,-418.876,0,-319.672,-345.676,-309.519,-341.552,-77.7386,-397.412,-423.416,-387.258,-316.557,-426.516,-113.269,-432.943,-458.947,-422.789,-352.088,-429.827,-465.358,-113.269,-432.943,-458.947,-422.789,-352.088,-429.827,-465.358,-465.358 0|1:224:135,0,3,32,18,0,0,0:135:5163:0,3,32,18,0,0,0:0,115,1264,715,0,0,0:-63.3745,-104.014,-527.663,-94.576,-518.225,-517.322,0,-423.648,-414.21,-414.015,-45.149,-468.798,-459.36,-364.783,-463.38,-104.014,-527.663,-518.225,-423.648,-468.798,-527.663,-104.014,-527.663,-518.225,-423.648,-468.798,-527.663,-527.663,-104.014,-527.663,-518.225,-423.648,-468.798,-527.663,-527.663,-527.663 dDocent_Contig_1382 126 . N G 82.1672 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=4;CIGAR=3X;DP=4;DPB=9.33333;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=24;MQMR=0;NS=1;NUMALT=1;ODDS=4.60517;PAIRED=1;PAIREDR=0;PAO=2;PQA=68;PQR=0;PRO=0;QA=116;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:4:0,4:0:0:4:116:-8.2124,-1.20412,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_1383 92 . T G 113.98 . AB=0.24;ABP=17.6895;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=195;DPB=195;DPRA=1.51351;EPP=24.725;EPPR=402.561;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=57.7935;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.722826;PAO=0;PQA=0;PQR=0;PRO=0;QA=350;QR=6230;RO=184;RPL=5;RPP=3.0103;RPPR=6.03148;RPR=5;RUN=1;SAF=5;SAP=3.0103;SAR=5;SRF=84;SRP=6.03148;SRR=100;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:40,0:40:1332:0:0:0,-12.0412,-119.788 0/0:18:18,0:18:601:0:0:0,-5.41854,-54.3345 0/1:25:19,6:19:635:6:210:-11.7167,0,-45.3192 0/0:59:55,4:55:1880:4:140:0,-4.81584,-154.572 0/0:21:21,0:21:712:0:0:0,-6.32163,-64.3964 0/0:31:31,0:31:1070:0:0:0,-9.33193,-96.5396 dDocent_Contig_1384 250 . N G 111.901 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:41:-3.74612,-0.30103,0 1/1:2:0,2:0:0:2:82:-7.11762,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1386 41 . A T 35.4364 . AB=0.181818;ABP=12.6832;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=82;DPB=82;DPRA=1.41667;EPP=9.52472;EPPR=105.289;GTI=0;LEN=1;MEANALT=1;MQM=54;MQMR=56.5063;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.924051;PAO=0;PQA=0;PQR=0;PRO=0;QA=118;QR=3001;RO=79;RPL=0;RPP=9.52472;RPPR=105.289;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=79;SRP=174.557;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:22,1:22:830:1:41:0,-2.82912,-70.2694 0/0:11:11,0:11:408:0:0:0,-3.31133,-36.59 0/0:7:7,0:7:275:0:0:0,-2.10721,-25.1178 0/1:11:9,2:9:354:2:77:-3.86216,0,-28.754 0/0:13:13,0:13:495:0:0:0,-3.91339,-44.6655 0/0:17:17,0:17:639:0:0:0,-5.11751,-56.3897 dDocent_Contig_1387 29 . G T 22282 . AB=0.529496;ABP=13.5146;AC=6;AF=0.5;AN=12;AO=736;CIGAR=1X;DP=1390;DPB=1390;DPRA=0;EPP=1601.21;EPPR=1418.81;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=29462;QR=25662;RO=652;RPL=0;RPP=1601.21;RPPR=1418.81;RPR=736;RUN=1;SAF=736;SAP=1601.21;SAR=0;SRF=652;SRP=1418.81;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:268:110,157:110:4357:157:6269:-483.171,0,-311.311 0/1:293:101,191:101:3976:191:7657:-600.41,0,-269.537 0/1:138:114,24:114:4440:24:954:-44.6114,0,-358.012 0/1:419:149,270:149:5868:270:10810:-846.012,0,-401.799 0/1:181:114,67:114:4493:67:2689:-187.635,0,-349.826 0/1:91:64,27:64:2528:27:1083:-70.3628,0,-200.277 dDocent_Contig_1388 83 . C T 3988.79 . AB=0.220056;ABP=491.755;AC=6;AF=0.5;AN=12;AO=158;CIGAR=1X4M;DP=718;DPB=718;DPRA=0;EPP=346.103;EPPR=1056.17;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.993671;PAIREDR=0.987629;PAO=0;PQA=0;PQR=0;PRO=0;QA=5779;QR=17214;RO=485;RPL=158;RPP=346.103;RPPR=1056.17;RPR=0;RUN=1;SAF=158;SAP=346.103;SAR=0;SRF=485;SRP=1056.17;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:119:84,2,33:84:2916:2,33:68,1184:-71.2982,-91.07,-327.502,0,-231.533,-227.115 0|1:116:47,12,57:47:1671:12,57:425,2074:-155.259,-134.789,-267.347,0,-101.555,-119.017 0|1:97:67,1,28:67:2386:1,28:37,1061:-66.9648,-84.1068,-278.264,0,-191.567,-186.166 0|1:115:88,10,17:88:3169:10,17:357,635:-25.5114,-22.9051,-278.459,0,-229.475,-253.461 0|1:142:104,28,10:104:3686:28,10:1000,364:-50.2139,0,-291.839,-51.787,-270.535,-349.051 0|1:129:95,21,13:95:3386:21,13:762,461:-33.6284,0,-269.676,-24.6721,-238.441,-296.75 dDocent_Contig_1389 1 . N G 74.1981 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.21888;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=78;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:78:-7.40278,-0.60206,0 dDocent_Contig_1390 25 . A C 2036.6 . AB=0.162983;ABP=717.269;AC=2;AF=0.166667;AN=12;AO=173;CIGAR=1X;DP=1959;DPB=1959;DPRA=0;EPP=378.675;EPPR=3879.09;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997759;PAO=0;PQA=0;PQR=0;PRO=0;QA=6893;QR=71106;RO=1785;RPL=0;RPP=378.675;RPPR=3879.09;RPR=173;RUN=1;SAF=173;SAP=378.675;SAR=0;SRF=1785;SRP=3879.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:330:319,11:319:12736:11:443:0,-59.1138,-1105.08 0/0:338:329,9:329:13096:9:357:0,-69.2574,-1145.2 0/0:216:201,15:201:8003:15:607:0,-10.0553,-664.881 0/0:351:331,20:331:13239:20:798:0,-33.5245,-1118.38 0/1:410:330,80:330:13021:80:3197:-164.371,0,-1047.53 0/1:314:275,38:275:11011:38:1491:-40.1027,0,-895.882 dDocent_Contig_1391 39 . G T 14547.1 . AB=0.323969;ABP=453.297;AC=4;AF=0.333333;AN=12;AO=561;CIGAR=1X;DP=2548;DPB=2548;DPRA=0;EPP=1221.21;EPPR=4313.38;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=59.9607;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997481;PAO=0;PQA=0;PQR=0;PRO=0;QA=22544;QR=79118;RO=1985;RPL=0;RPP=1221.21;RPPR=4313.38;RPR=561;RUN=1;SAF=561;SAP=1221.21;SAR=0;SRF=1985;SRP=4313.38;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:383:237,146:237:9358:146:5893:-414.834,0,-726.393 0/1:522:388,134:388:15503:134:5350:-324.198,0,-1235.96 0/1:379:269,110:269:10753:110:4434:-284.886,0,-852.948 0/1:389:236,152:236:9403:152:6118:-433.199,0,-728.553 0/0:460:451,9:451:18033:9:360:0,-105.712,-1588.7 0/0:415:404,10:404:16068:10:389:0,-89.3839,-1409.52 dDocent_Contig_1392 12 . A T 160.614 . AB=0.10628;ABP=281.725;AC=2;AF=0.166667;AN=12;AO=29;CIGAR=1X;DP=758;DPB=758;DPRA=0.546961;EPP=65.983;EPPR=1586.01;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.998628;PAO=0;PQA=0;PQR=0;PRO=0;QA=1155;QR=28843;RO=729;RPL=0;RPP=65.983;RPPR=1586.01;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=729;SRP=1586.01;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:77:73,4:73:2925:4:161:0,-8.30441,-248.471 0/1:128:113,15:113:4429:15:586:-14.5395,0,-360.034 0/1:79:72,7:72:2836:7:286:-2.33345,0,-231.57 0/0:112:109,3:109:4332:3:122:0,-22.3429,-378.466 0/0:164:164,0:164:6448:0:0:0,-49.3689,-580.09 0/0:198:198,0:198:7873:0:0:0,-59.6039,-708.172 dDocent_Contig_1393 152 . C A 155.176 . AB=0.115385;ABP=170.047;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=272;DPB=272;DPRA=3.5;EPP=46.4397;EPPR=550.221;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996032;PAO=0;PQA=0;PQR=0;PRO=0;QA=803;QR=9965;RO=252;RPL=0;RPP=46.4397;RPPR=550.221;RPR=20;RUN=1;SAF=0;SAP=46.4397;SAR=20;SRF=0;SRP=550.221;SRR=252;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:75:67,8:67:2674:8:325:-7.04239,0,-218.198 0/1:55:48,7:48:1898:7:283:-9.28635,0,-154.459 0/0:40:37,3:37:1490:3:122:0,-0.668707,-122.969 0/0:68:66,2:66:2555:2:73:0,-13.5409,-223.147 0/0:22:22,0:22:879:0:0:0,-6.62266,-79.4173 0/0:12:12,0:12:469:0:0:0,-3.61236,-42.5542 dDocent_Contig_1394 42 . T C 648.866 . AB=0.261682;ABP=55.7953;AC=3;AF=0.25;AN=12;AO=30;CIGAR=1X3M1X;DP=242;DPB=242;DPRA=0.768;EPP=68.1545;EPPR=454.677;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.7;PAIREDR=0.798077;PAO=0;PQA=0;PQR=0;PRO=0;QA=1165;QR=8059;RO=208;RPL=0;RPP=68.1545;RPPR=454.677;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=208;SRP=454.677;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:21:19,1:19:752:1:40:0,-2.42943,-64.006 0|1:44:33,11:33:1279:11:438:-26.5313,0,-102.147 0|1:33:26,7:26:1012:7:253:-13.1774,0,-81.4492 0|1:30:20,10:20:760:10:394:-26.7874,0,-59.6871 0|0:50:50,0:50:1935:0:0:0,-15.0515,-174.376 0|0:64:60,1:60:2321:1:40:0,-14.7617,-205.104 dDocent_Contig_1395 13 . T C 107667 . AB=0.830882;ABP=778.992;AC=12;AF=1;AN=12;AO=3100;CIGAR=1X4M;DP=3340;DPB=3340;DPRA=0;EPP=6734.57;EPPR=261.416;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=123672;QR=4724;RO=119;RPL=0;RPP=6734.57;RPPR=261.416;RPR=3100;RUN=1;SAF=3100;SAP=6734.57;SAR=0;SRF=119;SRP=261.416;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:440:28,52,360:28:1113:52,360:2064,14414:-1257.24,-1095.77,-1171.75,-78.2716,0,-61.536 1|1:631:17,21,593:17:680:21,593:835,23682:-2067.8,-2004.17,-2053.86,-122.495,-109.763,0 1|1:376:25,33,318:25:995:33,318:1319,12616:-1057.6,-956.486,-1028.48,-26.7152,0,-12.9144 1|1:726:49,9,666:49:1936:9,666:362,26526:-2210.57,-2195.49,-2352.09,-41.1801,-170.652,0 1|1:681:0,0,678:0:0:0,678:0,27076:-2434.04,-2434.04,-2434.04,-204.098,-204.098,0 1|1:486:0,1,485:0:0:1,485:41,19358:-1740.22,-1736.84,-1736.54,-146,-142.206,0 dDocent_Contig_1396 61 . T C 130582 . AB=0.907801;ABP=817.697;AC=11;AF=0.916667;AN=12;AO=3858;CIGAR=1X;DP=4027;DPB=4027;DPRA=0;EPP=8380.55;EPPR=361.303;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0.998963;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=151531;QR=6375;RO=165;RPL=3858;RPP=8380.55;RPPR=361.303;RPR=0;RUN=1;SAF=3858;SAP=8380.55;SAR=0;SRF=165;SRP=361.303;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:564:52,512:52:1976:512:20086:-1636.35,0,-8.26471 1/1:757:31,725:31:1222:725:28535:-2455.44,-117.421,0 1/1:354:18,336:18:691:336:13256:-1129.59,-44.0621,0 1/1:734:49,683:49:1906:683:26822:-2239.95,-48.7172,0 1/1:762:15,746:15:580:746:29289:-2580.97,-176.752,0 1/1:856:0,856:0:0:856:33543:-3015.93,-257.682,0 dDocent_Contig_1397 14 . G A 1370.73 . AB=0.135135;ABP=858.688;AC=2;AF=0.166667;AN=12;AO=100;CIGAR=1X;DP=1474;DPB=1474;DPRA=2.01635;EPP=220.158;EPPR=2986.61;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.622271;PAO=0;PQA=0;PQR=0;PRO=0;QA=4003;QR=54644;RO=1374;RPL=0;RPP=220.158;RPPR=2986.61;RPR=100;RUN=1;SAF=100;SAP=220.158;SAR=0;SRF=1374;SRP=2986.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:164:164,0:164:6470:0:0:0,-49.3689,-582.056 0/0:176:176,0:176:6981:0:0:0,-52.9813,-627.974 0/0:155:155,0:155:6164:0:0:0,-46.6596,-554.528 0/0:239:239,0:239:9552:0:0:0,-71.9462,-859.091 0/1:302:243,59:243:9654:59:2375:-122.99,0,-777.364 0/1:438:397,41:397:15823:41:1628:-14.8958,0,-1290.96 dDocent_Contig_1398 155 . T C 30.6155 . AB=0.0933333;ABP=110.744;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=184;DPB=184;DPRA=2.63077;EPP=33.4109;EPPR=372.161;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.747059;PAO=0;PQA=0;PQR=0;PRO=0;QA=546;QR=6681;RO=170;RPL=0;RPP=33.4109;RPPR=372.161;RPR=14;RUN=1;SAF=0;SAP=33.4109;SAR=14;SRF=0;SRP=372.161;SRR=170;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:19,1:19:750:1:40:0,-2.02492,-63.824 0/0:38:35,3:35:1357:3:100:0,-2.11412,-113.057 0/0:13:13,0:13:516:0:0:0,-3.91339,-46.7846 0/0:38:35,3:35:1396:3:121:0,-0.158943,-114.615 0/1:20:18,2:18:723:2:82:-1.75908,0,-59.3754 0/1:55:50,5:50:1939:5:203:-2.09641,0,-158.149 dDocent_Contig_1399 107 . N T 2281.1 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=84;CIGAR=1X;DP=84;DPB=84;DPRA=0;EPP=185.414;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2569;QR=0;RO=0;RPL=0;RPP=185.414;RPPR=0;RPR=84;RUN=1;SAF=0;SAP=185.414;SAR=84;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:19:0,19:0:0:19:573:-50.7766,-5.71957,0 1/1:29:0,29:0:0:29:872:-77.133,-8.72987,0 1/1:9:0,9:0:0:9:282:-25.1695,-2.70927,0 1/1:27:0,27:0:0:27:842:-74.4287,-8.12781,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1400 23 . C A 1509.61 . AB=0.203343;ABP=277.432;AC=3;AF=0.25;AN=12;AO=86;CIGAR=1X;DP=715;DPB=715;DPRA=0;EPP=189.757;EPPR=1368.87;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.977742;PAO=0;PQA=0;PQR=0;PRO=0;QA=3406;QR=25032;RO=629;RPL=0;RPP=189.757;RPPR=1368.87;RPR=86;RUN=1;SAF=86;SAP=189.757;SAR=0;SRF=629;SRP=1368.87;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:87:73,14:73:2906:14:555:-24.1031,0,-235.445 0/0:103:100,3:100:4055:3:119:0,-19.9111,-353.811 0/0:65:64,1:64:2522:1:39:0,-15.6704,-223.216 0/1:102:83,19:83:3268:19:751:-37.2042,0,-263.479 0/0:188:179,9:179:7117:9:362:0,-23.6493,-607.26 0/1:170:130,40:130:5164:40:1580:-91.2628,0,-413.451 dDocent_Contig_1401 11 . G A 137175 . AB=0.0547264;ABP=5541.41;AC=0;AF=0;AN=12;AO=176;CIGAR=1X3M1X;DP=5302;DPB=5302;DPRA=0;EPP=385.189;EPPR=1809.68;GTI=0;LEN=1;MEANALT=4.25;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.998798;PAO=0;PQA=0;PQR=0;PRO=0;QA=6925;QR=32940;RO=832;RPL=0;RPP=385.189;RPPR=1809.68;RPR=176;RUN=1;SAF=176;SAP=385.189;SAR=0;SRF=832;SRP=1809.68;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:693:134,46,510:134:5291:46,510:1800,20229:-1624.71,-1517.06,-1938.55,0,-287.353,-281.817 0|0:912:97,70,743:97:3894:70,743:2757,29404:-2390.52,-2192.93,-2492.72,0,-94.0744,-97.2012 0|0:713:114,32,564:114:4506:32,564:1269,22493:-1817.94,-1747.8,-2108.96,0,-266.335,-201.008 0|0:898:133,28,735:133:5260:28,735:1099,29129:-2357.38,-2307.04,-2731.48,0,-342.497,-211.617 0|0:972:227,0,740:227:8970:0,740:0,29531:-2363.67,-2432,-3170.11,0,-738.145,-515.382 0|0:1114:127,0,983:127:5019:0,983:0,38948:-3167.32,-3205.55,-3618.55,0,-413.065,-117.153 dDocent_Contig_1402 58 . A G 60597.8 . AB=0.579466;ABP=81.0062;AC=8;AF=0.666667;AN=12;AO=1898;CIGAR=1X;DP=2542;DPB=2542;DPRA=0;EPP=4124.46;EPPR=1399.27;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997366;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=73933;QR=24586;RO=643;RPL=1898;RPP=4124.46;RPPR=1399.27;RPR=0;RUN=1;SAF=1898;SAP=4124.46;SAR=0;SRF=643;SRP=1399.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:242:135,107:135:5114:107:4125:-298.414,0,-387.352 0/1:403:182,221:182:6909:221:8639:-655.773,0,-500.287 0/1:296:111,184:111:4280:184:7237:-562.122,0,-296.342 0/1:481:169,312:169:6516:312:12085:-942.091,0,-441.457 1/1:563:0,563:0:0:563:21918:-1970.94,-169.48,0 1/1:557:46,511:46:1767:511:19929:-1632.85,-8.40683,0 dDocent_Contig_1403 7 . T C 6187.24 . AB=0.5;ABP=3.0103;AC=6;AF=0.5;AN=12;AO=262;CIGAR=1X4M;DP=524;DPB=524;DPRA=0;EPP=571.936;EPPR=539.364;GTI=0;LEN=1;MEANALT=1.66667;MQM=44.8779;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=0.290076;PAIREDR=0.821862;PAO=0;PQA=0;PQR=0;PRO=0;QA=9023;QR=9492;RO=247;RPL=0;RPP=571.936;RPPR=539.364;RPR=262;RUN=1;SAF=262;SAP=571.936;SAR=0;SRF=247;SRP=539.364;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:45:32,1,12:32:1237:1,12:39,376:-18.0468,-24.4663,-125.84,0,-98.3955,-97.9891 0|1:114:60,2,52:60:2308:2,52:75,1721:-110.764,-122.68,-311.606,0,-183.354,-173.844 0|1:87:35,0,52:35:1350:0,52:0,1821:-130.523,-141.059,-251.942,0,-111.248,-95.5943 0|1:94:39,0,55:39:1489:0,55:0,1796:-124.036,-135.776,-257.971,0,-122.545,-105.988 0|1:103:39,7,57:39:1499:7,57:266,2066:-152.803,-143.662,-264.627,0,-102.199,-105.918 0|1:81:42,5,34:42:1609:5,34:185,1243:-86.5478,-88.0421,-218.603,0,-120.995,-121.907 dDocent_Contig_1404 17 . T C 36.2048 . AB=0.12;ABP=34.3664;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=278;DPB=278;DPRA=0.673077;EPP=16.0391;EPPR=593.651;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.422794;PAO=0;PQA=0;PQR=0;PRO=0;QA=246;QR=10702;RO=272;RPL=0;RPP=16.0391;RPPR=593.651;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=272;SRP=593.651;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1199:0:0:0,-9.0309,-108.19 0/0:45:42,3:42:1616:3:123:0,-2.08156,-134.211 0/1:25:22,3:22:876:3:123:-3.93904,0,-71.6207 0/0:69:69,0:69:2703:0:0:0,-20.7711,-243.402 0/0:50:50,0:50:1965:0:0:0,-15.0515,-177.043 0/0:59:59,0:59:2343:0:0:0,-17.7608,-211.032 dDocent_Contig_1405 85 . A T 50.3245 . AB=0.136364;ABP=53.5464;AC=1;AF=0.0833333;AN=12;AO=27;CIGAR=2X;DP=581;DPB=581;DPRA=1.10497;EPP=61.6401;EPPR=1171.51;GTI=0;LEN=1;MEANALT=1;MQM=59.7037;MQMR=59.9783;NS=6;NUMALT=1;ODDS=0;PAIRED=0.592593;PAIREDR=0.676895;PAO=0;PQA=0;PQR=0;PRO=0;QA=986;QR=20353;RO=554;RPL=11;RPP=5.02092;RPPR=18.0773;RPR=16;RUN=1;SAF=11;SAP=5.02092;SAR=16;SRF=304;SRP=14.4399;SRR=250;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:118:111,7:111:4112:7:261:0,-11.6748,-346.328 0|0:131:124,7:124:4504:7:263:0,-15.408,-381.412 0|1:44:38,6:38:1398:6:203:-5.35121,0,-112.845 0|0:107:100,7:100:3686:7:259:0,-8.55274,-308.188 0|0:81:81,0:81:2992:0:0:0,-24.3834,-269.445 0|0:100:100,0:100:3661:0:0:0,-30.103,-329.618 dDocent_Contig_1406 76 . T C 75429.5 . AB=0.727741;ABP=878.333;AC=8;AF=0.666667;AN=12;AO=2377;CIGAR=1X;DP=2975;DPB=2975;DPRA=0;EPP=5164.6;EPPR=1299.38;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=92846;QR=21524;RO=597;RPL=2377;RPP=5164.6;RPPR=1299.38;RPR=0;RUN=1;SAF=2377;SAP=5164.6;SAR=0;SRF=597;SRP=1299.38;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:509:64,445:64:2312:445:17203:-1393.82,0,-55.0892 1/1:554:42,512:42:1546:512:20056:-1664.06,-27.3599,0 0/1:377:46,331:46:1693:331:12937:-1049.94,0,-39.1475 1/1:478:26,451:26:883:451:17636:-1506.16,-63.9963,0 0/1:545:261,284:261:9318:284:11090:-833.344,0,-674.404 0/1:512:158,354:158:5772:354:13924:-1098.03,0,-365.35 dDocent_Contig_1407 13 . G A 605.404 . AB=0.132124;ABP=456.747;AC=1;AF=0.0833333;AN=12;AO=67;CIGAR=1X;DP=1640;DPB=1640;DPRA=1.37681;EPP=148.499;EPPR=2605.37;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=56.4946;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.917991;PAO=0;PQA=0;PQR=0;PRO=0;QA=2573;QR=62357;RO=1573;RPL=0;RPP=148.499;RPPR=3418.74;RPR=67;RUN=1;SAF=67;SAP=148.499;SAR=0;SRF=1473;SRP=2605.37;SRR=100;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:266:266,0:266:10530:0:0:0,-80.074,-904.294 0/0:303:302,1:302:11965:1:40:0,-87.2164,-1035.44 0/0:199:199,0:199:7889:0:0:0,-59.905,-658.599 0/0:225:225,0:225:8915:0:0:0,-67.7317,-771.519 0/0:261:246,15:246:9725:15:568:0,-27.1179,-789.632 0/1:386:335,51:335:13333:51:1965:-60.8592,0,-1061 dDocent_Contig_1408 98 . N T 191.555 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=192;QR=0;RO=0;RPL=8;RPP=20.3821;RPPR=0;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 1/1:2:0,2:0:0:2:19:-1.80499,-0.60206,0 1/1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:103:-9.61002,-0.90309,0 dDocent_Contig_1409 73 . A C 335.466 . AB=0.102564;ABP=752.113;AC=1;AF=0.0833333;AN=12;AO=280;CIGAR=1X;DP=4380;DPB=4380;DPRA=0;EPP=611.023;EPPR=8897.36;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10739;QR=157425;RO=4096;RPL=280;RPP=611.023;RPPR=8897.36;RPR=0;RUN=1;SAF=280;SAP=611.023;SAR=0;SRF=4096;SRP=8897.36;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:546:488,56:488:18908:56:2193:-33.5643,0,-1536.46 0/0:773:708,65:708:27092:65:2480:0,-9.32336,-2213.01 0/0:598:550,48:550:21171:48:1833:0,-14.8132,-1738.77 0/0:700:667,32:667:25363:32:1191:0,-103.046,-2173.46 0/0:856:833,23:833:31966:23:901:0,-176.281,-2793.19 0/0:907:850,56:850:32925:56:2141:0,-80.2518,-2767.82 dDocent_Contig_1410 26 . T A 120.866 . AB=0.0932203;ABP=511.797;AC=1;AF=0.0833333;AN=12;AO=108;CIGAR=1X;DP=2159;DPB=2159;DPRA=1.12087;EPP=237.529;EPPR=4456.7;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4341;QR=81795;RO=2051;RPL=0;RPP=237.529;RPPR=4456.7;RPR=108;RUN=1;SAF=108;SAP=237.529;SAR=0;SRF=2051;SRP=4456.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:321:297,24:297:11807:24:970:0,-9.03503,-974.212 0/0:377:351,26:351:13961:26:1054:0,-18.3404,-1160.3 0/1:354:321,33:321:12815:33:1319:-12.4053,0,-1045.81 0/0:441:416,25:416:16541:25:998:0,-42.6427,-1397.28 0/0:365:365,0:365:14659:0:0:0,-109.876,-1318.15 0/0:301:301,0:301:12012:0:0:0,-90.61,-1080.23 dDocent_Contig_1411 8 . C A 10330.6 . AB=0.261877;ABP=853.085;AC=2;AF=0.166667;AN=12;AO=453;CIGAR=1X;DP=4688;DPB=4688;DPRA=1.08356;EPP=986.687;EPPR=9197.02;GTI=0;LEN=1;MEANALT=1;MQM=59.9823;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=17301;QR=162718;RO=4234;RPL=0;RPP=986.687;RPPR=9197.02;RPR=453;RUN=1;SAF=453;SAP=986.687;SAR=0;SRF=4234;SRP=9197.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:722:722,0:722:27649:0:0:0,-217.344,-2486.77 0/0:1058:1058,0:1058:40627:0:0:0,-318.49,-3653.81 0/0:470:469,0:469:18062:0:0:0,-141.183,-1624.49 0/0:712:711,1:711:27308:1:35:0,-210.835,-2452.58 0/1:1024:743,281:743:28637:281:10696:-653.991,0,-2267.32 0/1:702:531,171:531:20435:171:6570:-379.88,0,-1626.69 dDocent_Contig_1413 19 . T C 545.183 . AB=0.114583;ABP=622.332;AC=1;AF=0.0833333;AN=12;AO=113;CIGAR=1X;DP=2840;DPB=2840;DPRA=0.637758;EPP=248.387;EPPR=5920.27;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4518;QR=108513;RO=2725;RPL=0;RPP=248.387;RPPR=5920.27;RPR=113;RUN=1;SAF=113;SAP=248.387;SAR=0;SRF=2725;SRP=5920.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:311:308,3:308:12285:3:122:0,-82.2478,-1093.4 0/0:429:396,33:396:15793:33:1302:0,-11.7001,-1302.7 0/1:480:425,55:425:16891:55:2213:-54.8371,0,-1374.33 0/0:304:291,12:291:11528:12:475:0,-48.513,-993.641 0/0:678:678,0:678:27016:0:0:0,-204.098,-2429.04 0/0:638:627,10:627:25000:10:406:0,-155.266,-2210.91 dDocent_Contig_1414 98 . N C 104.401 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=106;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:72:-6.71887,-0.90309,0 dDocent_Contig_1415 69 . A G 4219.09 . AB=0.456716;ABP=8.46167;AC=6;AF=0.5;AN=12;AO=153;CIGAR=1X;DP=335;DPB=335;DPRA=0;EPP=335.246;EPPR=398.218;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=55.1484;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.879121;PAO=0;PQA=0;PQR=0;PRO=0;QA=5833;QR=6095;RO=182;RPL=152;RPP=326.616;RPPR=398.218;RPR=1;RUN=1;SAF=152;SAP=326.616;SAR=1;SRF=0;SRP=398.218;SRR=182;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:19,15:19:643:15:588:-43.0261,0,-42.9997 0/1:81:44,37:44:1491:37:1436:-105.121,0,-105.825 0/1:65:33,32:33:1082:32:1201:-88.7975,0,-78.1079 0/1:38:23,15:23:763:15:540:-37.4718,0,-46.9853 0/1:68:37,31:37:1234:31:1207:-88.4436,0,-85.3689 0/1:49:26,23:26:882:23:861:-63.0468,0,-61.1016 dDocent_Contig_1416 31 . G A 141.253 . AB=0.177778;ABP=43.5927;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=526;DPB=526;DPRA=0.467775;EPP=20.3821;EPPR=1127.83;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=307;QR=19769;RO=518;RPL=0;RPP=20.3821;RPPR=1127.83;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=518;SRP=1127.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:103:103,0:103:3862:0:0:0,-31.0061,-347.674 0/0:32:32,0:32:1242:0:0:0,-9.63296,-112.068 0/1:45:37,8:37:1432:8:307:-14.4441,0,-115.609 0/0:14:14,0:14:539:0:0:0,-4.21442,-48.8523 0/0:165:165,0:165:6330:0:0:0,-49.6699,-569.589 0/0:167:167,0:167:6364:0:0:0,-50.272,-572.666 dDocent_Contig_1417 30 . G C 6161.85 . AB=0.289631;ABP=325.519;AC=6;AF=0.5;AN=12;AO=243;CIGAR=1X;DP=839;DPB=839;DPRA=0;EPP=530.678;EPPR=1292.86;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9682;QR=23502;RO=594;RPL=0;RPP=530.678;RPPR=1292.86;RPR=243;RUN=1;SAF=243;SAP=530.678;SAR=0;SRF=594;SRP=1292.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:81:58,22:58:2260:22:886:-55.7151,0,-179.235 0/1:162:117,44:117:4615:44:1719:-106.1,0,-366.469 0/1:252:165,87:165:6533:87:3514:-240.424,0,-511.849 0/1:84:55,29:55:2184:29:1160:-79.3944,0,-171.448 0/1:129:93,36:93:3679:36:1419:-89.1262,0,-292.314 0/1:131:106,25:106:4231:25:984:-49.422,0,-341.322 dDocent_Contig_1418 15 . A G 922.231 . AB=0.123664;ABP=808.772;AC=1;AF=0.0833333;AN=12;AO=180;CIGAR=1X;DP=4599;DPB=4599;DPRA=0;EPP=393.875;EPPR=9596.58;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=59.9656;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=1;PAIREDR=0.996605;PAO=0;PQA=0;PQR=0;PRO=0;QA=7146;QR=176620;RO=4418;RPL=0;RPP=393.875;RPPR=9596.58;RPR=180;RUN=1;SAF=180;SAP=393.875;SAR=0;SRF=4418;SRP=9596.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:653:606,47:606:24183:47:1875:0,-27.6163,-2005.36 0/0:783:768,15:768:30716:15:588:0,-182.455,-2707.22 0/0:614:579,35:579:23102:35:1382:0,-60.1993,-1952.13 0/1:655:573,81:573:22883:81:3219:-92.5418,0,-1860.13 0/0:1021:1020,1:1020:40787:1:41:0,-303.257,-3662.81 0/0:873:872,1:872:34949:1:41:0,-258.705,-3138.01 dDocent_Contig_1419 67 . T A 128.695 . AB=0.193548;ABP=28.2974;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=273;DPB=273;DPRA=0.587678;EPP=20.3821;EPPR=578.45;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.928302;PAO=0;PQA=0;PQR=0;PRO=0;QA=319;QR=10226;RO=265;RPL=8;RPP=20.3821;RPPR=578.45;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=265;SRP=578.45;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:29,2:29:1087:2:73:0,-2.40063,-91.2003 0/0:48:48,0:48:1810:0:0:0,-14.4494,-163.145 0/1:31:25,6:25:992:6:246:-13.1882,0,-80.2449 0/0:45:45,0:45:1765:0:0:0,-13.5463,-159.075 0/0:59:59,0:59:2232:0:0:0,-17.7608,-201.105 0/0:59:59,0:59:2340:0:0:0,-17.7608,-210.762 dDocent_Contig_1420 50 . C T 17081.9 . AB=0.0348259;ABP=1514.14;AC=0;AF=0;AN=12;AO=28;CIGAR=1X1M1X;DP=804;DPB=804;DPRA=0;EPP=63.8115;EPPR=491.592;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.5;PAIREDR=0.471111;PAO=0;PQA=0;PQR=0;PRO=0;QA=991;QR=8792;RO=225;RPL=28;RPP=63.8115;RPPR=491.592;RPR=0;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=225;SRP=491.592;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:102:32,2,66:32:1273:2,66:75,2567:-201.317,-204.806,-309.021,0,-98.7151,-84.9897 0|0:189:51,1,134:51:2002:1,134:37,5303:-421.222,-433.548,-597.894,0,-161.773,-124.461 0|0:163:43,5,115:43:1671:5,115:180,4552:-361.695,-359.955,-495.751,0,-122.646,-102.711 0|0:187:64,10,113:64:2488:10,113:344,4510:-352.215,-343.548,-544.974,0,-176.547,-170.462 0|0:75:13,5,57:13:511:5,57:175,2264:-182.501,-172.181,-212.704,0,-27.8339,-24.9007 0|0:88:22,5,61:22:847:5,61:180,2427:-193.238,-185.177,-253.198,0,-54.8672,-51.1863 dDocent_Contig_1421 60 . T A 47888.7 . AB=0.0734149;ABP=1423.98;AC=0;AF=0;AN=12;AO=66;CIGAR=1X2M1X3M1X10M;DP=2483;DPB=2319.33;DPRA=0;EPP=146.327;EPPR=611.023;GTI=0;LEN=1;MEANALT=24;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.992857;PAO=0;PQA=0;PQR=0;PRO=0;QA=2604;QR=10078;RO=280;RPL=66;RPP=146.327;RPPR=611.023;RPR=0;RUN=1;SAF=66;SAP=146.327;SAR=0;SRF=280;SRP=611.023;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:335:62,0,93,155:62:2213:0,93,155:0,3603,5816:-573.253,-591.917,-772.324,-295.956,-476.366,-448.37,-115.575,-295.986,0,-249.326 0|0:405:33,13,79,227:33:1208:13,79,227:519,3032,8556:-841.249,-808.436,-903.248,-602.348,-658.327,-677.293,-150.12,-206.098,0,-180.513 0|0:370:40,0,109,175:40:1454:0,109,175:0,4270,6575:-758.871,-770.912,-889.658,-419.828,-538.576,-505.764,-232.363,-351.11,0,-298.43 0|0:425:34,0,124,190:34:1230:0,124,190:0,4737,7132:-862.113,-872.348,-972.754,-483.751,-584.157,-546.83,-288.208,-388.615,0,-331.419 0|0:454:54,0,220,136:54:1932:0,220,136:0,8519,5097:-943.352,-959.608,-1117.14,-259.874,-417.411,-351.185,-542.218,-699.753,0,-658.813 0|0:494:57,53,151,165:57:2041:53,151,165:2085,5834,6319:-814.031,-659.679,-810.16,-352.096,-347.02,-473.076,-312.667,-307.59,0,-429.432 dDocent_Contig_1422 15 . G T 27446.3 . AB=0.248538;ABP=566.526;AC=2;AF=0.166667;AN=12;AO=255;CIGAR=2X;DP=1349;DPB=1349;DPRA=0;EPP=556.736;EPPR=930.229;GTI=0;LEN=1;MEANALT=2.6;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9911;QR=16975;RO=427;RPL=0;RPP=556.736;RPPR=930.229;RPR=255;RUN=1;SAF=255;SAP=556.736;SAR=0;SRF=427;SRP=930.229;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:165:100,5,60:100:3985:5,60:198,2377:-165.523,-179.329,-505.968,0,-311.848,-310.083 0|0:323:142,0,180:142:5643:0,180:0,7187:-549.154,-591.9,-1056.45,0,-464.542,-410.357 0|0:112:23,9,80:23:920:9,80:351,3164:-253.431,-231.505,-304.579,0,-46.9412,-51.707 0|0:422:158,15,248:158:6265:15,248:598,9847:-763.03,-761.345,-1272.51,0,-466.436,-441.028 1|0:209:4,170,34:4:162:170,34:6563,1379:-638.11,-100.379,-62.562,-525.589,0,-528.713 1|0:118:0,56,61:0:0:56,61:2201,2410:-379.376,-198.34,-181.482,-181.079,0,-162.716 dDocent_Contig_1423 10 . T C 2971.02 . AB=0.0434783;ABP=627.545;AC=3;AF=0.25;AN=12;AO=15;CIGAR=1X1M2X;DP=477;DPB=477;DPRA=0;EPP=35.5824;EPPR=736.968;GTI=0;LEN=1;MEANALT=2.25;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=578;QR=13183;RO=338;RPL=0;RPP=35.5824;RPPR=736.968;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=338;SRP=736.968;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:80:65,0,10,5:65:2527:0,10,5:0,380,194:-11.5892,-31.1561,-238.812,0,-207.652,-204.641,-15.2134,-222.872,-191.712,-221.367 0|0:113:64,1,3,45:64:2502:1,3,45:39,120,1732:-122.929,-138.989,-344.394,-132.308,-334.809,-337.112,0,-202.492,-195.812,-192.151 0|0:58:46,0,1,11:46:1806:0,1,11:0,38,423:-20.8837,-34.7311,-183.275,-31.615,-180.159,-179.858,0,-148.549,-145.433,-145.238 0|0:94:64,0,1,29:64:2490:0,1,29:0,40,1126:-73.2463,-92.5123,-297.144,-89.2168,-293.849,-293.548,0,-204.621,-201.326,-195.891 0|1:78:58,19,0,1:58:2265:19,0,1:737,0,39:-43.0878,0,-180.484,-60.5475,-186.203,-246.752,-57.3416,-182.997,-243.546,-243.245 0|1:54:41,13,0,0:41:1593:13,0,0:503,0,0:-29.3631,0,-127.374,-41.7053,-131.287,-172.606,-41.7053,-131.287,-172.606,-172.606 dDocent_Contig_1425 36 . A G 82.6665 . AB=0.16129;ABP=33.9012;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=176;DPB=176;DPRA=1.06897;EPP=13.8677;EPPR=372.161;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.982353;PAO=0;PQA=0;PQR=0;PRO=0;QA=196;QR=6636;RO=170;RPL=0;RPP=13.8677;RPPR=372.161;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=170;SRP=372.161;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:399:0:0:0,-3.0103,-36.2686 0/0:32:32,0:32:1230:0:0:0,-9.63296,-110.98 0/0:26:26,0:26:1027:0:0:0,-7.82678,-92.7259 0/0:34:34,0:34:1344:0:0:0,-10.235,-121.232 0/0:43:43,0:43:1663:0:0:0,-12.9443,-149.912 0/1:31:25,5:25:973:5:196:-8.5854,0,-78.4404 dDocent_Contig_1426 90 . G C 88.2159 . AB=0.12987;ABP=94.6352;AC=1;AF=0.0833333;AN=12;AO=23;CIGAR=1X;DP=686;DPB=686;DPRA=0.866534;EPP=52.9542;EPPR=1442.7;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=806;QR=23181;RO=663;RPL=23;RPP=52.9542;RPPR=1442.7;RPR=0;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=663;SRP=1442.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:77:67,10:67:2332:10:352:-8.83932,0,-186.965 0/0:108:102,6:102:3546:6:215:0,-12.8121,-299.656 0/0:87:81,6:81:2886:6:219:0,-6.12541,-239.899 0/0:101:101,0:101:3545:0:0:0,-30.404,-319.266 0/0:150:150,0:150:5257:0:0:0,-45.1545,-473.276 0/0:163:162,1:162:5615:1:20:0,-47.0679,-503.486 dDocent_Contig_1427 21 . C T 241.403 . AB=0.103371;ABP=611.066;AC=2;AF=0.166667;AN=12;AO=57;CIGAR=1X;DP=1768;DPB=1768;DPRA=0.748588;EPP=126.784;EPPR=3711.89;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996487;PAO=0;PQA=0;PQR=0;PRO=0;QA=2179;QR=68366;RO=1708;RPL=0;RPP=126.784;RPPR=3711.89;RPR=57;RUN=1;SAF=57;SAP=126.784;SAR=0;SRF=1708;SRP=3711.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:283:274,9:274:10950:9:339:0,-54.3378,-953.908 0/0:332:330,2:330:13198:2:80:0,-92.3502,-1179.27 0/1:200:177,23:177:7108:23:896:-20.7355,0,-579.164 0/1:245:221,23:221:8865:23:864:-4.21836,0,-723.479 0/0:321:321,0:321:12836:0:0:0,-96.6306,-1154.3 0/0:387:385,0:385:15409:0:0:0,-115.897,-1385.2 dDocent_Contig_1428 10 . C T 796.692 . AB=0.134146;ABP=384.342;AC=4;AF=0.333333;AN=12;AO=44;CIGAR=1X3M;DP=472;DPB=472;DPRA=1.13889;EPP=98.5551;EPPR=843.37;GTI=0;LEN=1;MEANALT=2.75;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1764;QR=15180;RO=387;RPL=0;RPP=98.5551;RPPR=843.37;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=387;SRP=843.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:63:51,7,4:51:2007:7,4:270,150:-6.82018,0,-163,-9.89587,-152.827,-173.792 0|1:110:81,14,15:81:3171:14,15:559,597:-24.769,-3.11296,-259.615,0,-214.675,-256.2 0|1:86:57,11,17:57:2215:11,17:432,689:-39.6646,-21.2985,-199.967,0,-146.458,-176.87 0|1:69:54,6,8:54:2124:6,8:242,328:-10.8208,-7.1307,-180.021,0,-154.753,-172.293 0|0:83:83,0,0:83:3247:0,0:0,0:0,-24.9855,-292.327,-24.9855,-292.327,-292.327 0|0:61:61,0,0:61:2416:0,0:0,0:0,-18.3628,-217.603,-18.3628,-217.603,-217.603 dDocent_Contig_1429 18 . C T 2518.39 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=25;CIGAR=2X8M;DP=2595;DPB=2764.6;DPRA=0;EPP=57.2971;EPPR=4241.72;GTI=0;LEN=1;MEANALT=12;MQM=34.92;MQMR=59.6101;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0.0471311;PAO=0;PQA=0;PQR=0;PRO=0;QA=873;QR=76093;RO=1952;RPL=0;RPP=57.2971;RPPR=4241.72;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=1952;SRP=4241.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:399:272,47,0,52:272:10592:47,0,52:1271,0,2097:-90.7526,-83.5404,-939.757,-172.633,-953.906,-1043.03,0,-781.323,-870.445,-854.791 0|0:478:356,39,0,54:356:13905:39,0,54:899,0,2175:-71.9245,-120.218,-1251.19,-179.091,-1262.93,-1321.84,0,-1083.9,-1142.81,-1126.55 0|0:472:357,37,0,43:357:13911:37,0,43:890,0,1728:-34.5941,-82.7807,-1214.76,-142.062,-1225.9,-1285.21,0,-1083.89,-1143.2,-1130.26 0|0:458:318,56,0,46:318:12378:56,0,46:1524,0,1854:-56.9715,-45.7199,-1045.94,-152.699,-1062.8,-1169.81,0,-910.143,-1017.15,-1003.3 0|0:316:260,14,17,13:260:10172:14,17,13:347,593,531:0,-55.0656,-886.897,-34.6187,-847.467,-865.577,-34.4432,-847.313,-826.896,-866.627 0|0:472:389,21,8,35:389:15135:21,8,35:466,280,1412:0,-87.1801,-1324.21,-96.476,-1309.91,-1337.46,-0.728416,-1214.22,-1223.55,-1233.64 dDocent_Contig_1430 17 . G T 176.975 . AB=0.0864198;ABP=123.353;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=5M1X;DP=398;DPB=419.333;DPRA=1.11558;EPP=20.3821;EPPR=810.798;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.862903;PAO=0;PQA=0;PQR=0;PRO=0;QA=316;QR=14768;RO=372;RPL=0;RPP=20.3821;RPPR=810.798;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=372;SRP=810.798;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:51:41,10,0:41:1633:10,0:353,0:-16.7526,0,-131.857,-29.0948,-134.867,-163.6 0|1:81:70,4,7:70:2783:4,7:140,277:-1.75065,-11.4497,-239.373,0,-217.784,-227.064 0|0:67:65,1,1:65:2575:1,1:39,39:0,-16.3611,-227.997,-16.3611,-225.093,-227.997 0|0:66:64,1,0:64:2529:1,0:37,0:0,-16.2587,-224.052,-19.2659,-224.353,-227.38 0|0:69:68,0,0:68:2701:0,0:0,0:0,-20.47,-242.864,-20.47,-242.864,-242.864 0|0:64:64,0,0:64:2547:0,0:0,0:0,-19.2659,-229.374,-19.2659,-229.374,-229.374 dDocent_Contig_1431 9 . T A 694.121 . AB=0.170732;ABP=234.669;AC=4;AF=0.333333;AN=12;AO=45;CIGAR=1X;DP=339;DPB=339;DPRA=1.10385;EPP=100.727;EPPR=641.423;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.266667;PAIREDR=0.496599;PAO=0;PQA=0;PQR=0;PRO=0;QA=1721;QR=11354;RO=294;RPL=0;RPP=100.727;RPPR=641.423;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=294;SRP=641.423;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:40:34,6:34:1307:6:232:-9.20786,0,-105.877 0/0:52:52,0:52:2018:0:0:0,-15.6536,-181.852 0/1:58:51,7:51:1968:7:272:-7.38749,0,-159.901 0/1:89:69,20:69:2659:20:756:-41.5736,0,-212.703 0/0:41:38,3:38:1474:3:116:0,-1.52453,-122.117 0/1:59:50,9:50:1928:9:345:-13.6481,0,-156 dDocent_Contig_1432 10 . T A 167.409 . AB=0.144737;ABP=86.3263;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=236;DPB=236;DPRA=0.95;EPP=26.8965;EPPR=491.592;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.636364;PAIREDR=0.493333;PAO=0;PQA=0;PQR=0;PRO=0;QA=441;QR=8990;RO=225;RPL=0;RPP=26.8965;RPPR=491.592;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=225;SRP=491.592;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:597:0:0:0,-4.51545,-54.068 0/1:50:42,8:42:1685:8:326:-14.6584,0,-136.82 0/1:26:23,3:23:938:3:115:-2.8956,0,-76.8931 0/0:40:40,0:40:1589:0:0:0,-12.0412,-143.242 0/0:47:47,0:47:1871:0:0:0,-14.1484,-168.592 0/0:58:58,0:58:2310:0:0:0,-17.4597,-208.055 dDocent_Contig_1433 13 . G A 603.799 . AB=0.132565;ABP=409.927;AC=3;AF=0.25;AN=12;AO=61;CIGAR=1X;DP=838;DPB=838;DPRA=1.10536;EPP=135.47;EPPR=1688.07;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2431;QR=30833;RO=776;RPL=0;RPP=135.47;RPPR=1688.07;RPR=61;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=776;SRP=1688.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:102:84,18:84:3364:18:713:-33.7878,0,-272.106 0/0:230:214,15:214:8499:15:593:0,-15.5753,-710.734 0/1:106:97,9:97:3846:9:366:-1.39577,0,-314.234 0/1:139:120,19:120:4771:19:759:-26.7879,0,-387.46 0/0:160:160,0:160:6368:0:0:0,-48.1648,-572.876 0/0:101:101,0:101:3985:0:0:0,-30.404,-358.654 dDocent_Contig_1434 14 . C A 58.3651 . AB=0.125;ABP=51.8684;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=230;DPB=230;DPRA=1.05263;EPP=13.8677;EPPR=491.592;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.702222;PAO=0;PQA=0;PQR=0;PRO=0;QA=198;QR=9063;RO=225;RPL=0;RPP=13.8677;RPPR=491.592;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=225;SRP=491.592;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1096:0:0:0,-8.12781,-98.9236 0/0:41:41,0:41:1632:0:0:0,-12.3422,-147.103 0/0:38:38,0:38:1544:0:0:0,-11.4391,-139.193 0/1:40:35,5:35:1412:5:198:-6.15527,0,-115.289 0/0:45:45,0:45:1812:0:0:0,-13.5463,-163.286 0/0:39:39,0:39:1567:0:0:0,-11.7402,-141.267 dDocent_Contig_1435 107 . N A 119.532 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=115;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:39:-3.70435,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_1436 9 . T A 183.478 . AB=0.120482;ABP=210.687;AC=1;AF=0.0833333;AN=12;AO=33;CIGAR=1X;DP=1100;DPB=1100;DPRA=1.04062;EPP=74.6689;EPPR=2319.97;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1247;QR=40956;RO=1067;RPL=0;RPP=74.6689;RPPR=2319.97;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=1067;SRP=2319.97;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:128:120,8:120:4587:8:297:0,-11.4526,-385.806 0/0:162:161,1:161:6192:1:39:0,-44.8703,-553.312 0/0:287:283,4:283:10872:4:152:0,-72.3464,-964.005 0/1:166:146,20:146:5579:20:759:-18.6666,0,-452.109 0/0:197:197,0:197:7553:0:0:0,-59.3029,-679.6 0/0:160:160,0:160:6173:0:0:0,-48.1648,-555.494 dDocent_Contig_1437 21 . T C 110.065 . AB=0.166667;ABP=101.45;AC=0;AF=0;AN=12;AO=50;CIGAR=1X2M1X2M4D2M2D2M2D1M;DP=651;DPB=605.737;DPRA=0;EPP=111.584;EPPR=1099.6;GTI=0;LEN=1;MEANALT=5.83333;MQM=7.88;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.431683;PAO=0;PQA=0;PQR=0;PRO=0;QA=1969;QR=19354;RO=505;RPL=0;RPP=111.584;RPPR=1099.6;RPR=50;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=505;SRP=1099.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:109:88,4,9:88:3371:4,9:159,274:0,-24.8449,-300.41,-6.92362,-282.108,-281.062 0|0:102:62,17,16:62:2397:17,16:669,431:-11.3194,-23.4903,-215.329,0,-190.523,-192.224 0|0:49:39,3,5:39:1504:3,5:120,158:0,-10.5413,-133.236,-0.307266,-122.788,-122.519 0|0:112:88,5,11:88:3356:5,11:188,338:0,-24.4342,-298.334,-1.63672,-275.053,-273.819 0|0:113:95,8,1:95:3658:8,1:317,25:0,-25.3407,-323.358,-26.9178,-324.089,-327.117 0|0:166:133,13,17:133:5068:13,17:516,476:0,-34.6618,-446.565,-6.23072,-416.759,-417.059 dDocent_Contig_1438 98 . N T 4222.3 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=180;CIGAR=1X;DP=180;DPB=180;DPRA=0;EPP=393.875;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4666;QR=0;RO=0;RPL=180;RPP=393.875;RPPR=0;RPR=0;RUN=1;SAF=180;SAP=393.875;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:27:0,27:0:0:27:712:-64.3265,-8.12781,0 1/1:40:0,40:0:0:40:1071:-96.6336,-12.0412,0 1/1:15:0,15:0:0:15:383:-34.7154,-4.51545,0 1/1:36:0,36:0:0:36:952:-85.9268,-10.8371,0 1/1:25:0,25:0:0:25:606:-54.7704,-7.52575,0 1/1:37:0,37:0:0:37:942:-85.0122,-11.1381,0 dDocent_Contig_1439 7 . T C 207.959 . AB=0.158537;ABP=86.0559;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=456;DPB=456;DPRA=1.09626;EPP=31.2394;EPPR=964.973;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.846154;PAIREDR=0.674944;PAO=0;PQA=0;PQR=0;PRO=0;QA=505;QR=16942;RO=443;RPL=0;RPP=31.2394;RPPR=964.973;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=443;SRP=964.973;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:36,0:36:1380:0:0:0,-10.8371,-124.482 0/0:93:93,0:93:3515:0:0:0,-27.9958,-316.481 0/1:82:69,13:69:2636:13:505:-21.1146,0,-212.746 0/0:78:78,0:78:3014:0:0:0,-23.4803,-271.419 0/0:61:61,0:61:2339:0:0:0,-18.3628,-210.717 0/0:106:106,0:106:4058:0:0:0,-31.9092,-365.305 dDocent_Contig_1440 98 . N T 129.052 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=126;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:36:-3.59827,-0.30103,0 1/1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:9:-0.899997,-0.30103,0 1/1:1:0,1:0:0:1:13:-1.29999,-0.30103,0 dDocent_Contig_1441 9 . T C 1148.73 . AB=0.162946;ABP=445.079;AC=6;AF=0.5;AN=12;AO=73;CIGAR=1X;DP=448;DPB=448;DPRA=0;EPP=161.528;EPPR=815.141;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=59.6684;NS=6;NUMALT=1;ODDS=0;PAIRED=0.753425;PAIREDR=0.860963;PAO=0;PQA=0;PQR=0;PRO=0;QA=2795;QR=14351;RO=374;RPL=0;RPP=161.528;RPPR=815.141;RPR=73;RUN=1;SAF=73;SAP=161.528;SAR=0;SRF=374;SRP=815.141;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:36,6:36:1390:6:233:-8.69682,0,-112.739 0/1:75:65,9:65:2498:9:335:-8.01269,0,-202.55 0/1:67:49,18:49:1899:18:683:-41.631,0,-150.983 0/1:77:58,19:58:2221:19:735:-43.3019,0,-176.705 0/1:74:66,8:66:2512:8:308:-5.80601,0,-202.458 0/1:113:100,13:100:3831:13:501:-11.4215,0,-310.873 dDocent_Contig_1442 44 . A G 142.157 . AB=0.12069;ABP=147.975;AC=2;AF=0.166667;AN=12;AO=25;CIGAR=1X;DP=418;DPB=418;DPRA=1.18548;EPP=17.6895;EPPR=30.8637;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.48;PAIREDR=0.62341;PAO=0;PQA=0;PQR=0;PRO=0;QA=983;QR=14765;RO=393;RPL=0;RPP=57.2971;RPPR=856.399;RPR=25;RUN=1;SAF=19;SAP=17.6895;SAR=6;SRF=232;SRP=30.8637;SRR=161;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:74:71,3:71:2649:3:123:0,-10.8114,-227.128 0/0:104:96,8:96:3626:8:314:0,-2.68472,-297.814 0/1:46:38,8:38:1394:8:311:-14.5032,0,-111.867 0/0:66:66,0:66:2506:0:0:0,-19.868,-225.724 0/1:70:64,6:64:2407:6:235:-0.446809,0,-195.751 0/0:58:58,0:58:2183:0:0:0,-17.4597,-196.684 dDocent_Contig_1443 107 . N A 2854.7 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=93;CIGAR=1X;DP=93;DPB=93;DPRA=0;EPP=204.957;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3149;QR=0;RO=0;RPL=0;RPP=204.957;RPPR=0;RPR=93;RUN=1;SAF=0;SAP=204.957;SAR=93;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:23:0,23:0:0:23:794:-71.7739,-6.92369,0 1/1:2:0,2:0:0:2:19:-1.80499,-0.60206,0 1/1:13:0,13:0:0:13:456:-41.3725,-3.91339,0 1/1:21:0,21:0:0:21:720:-65.1178,-6.32163,0 1/1:34:0,34:0:0:34:1160:-104.697,-10.235,0 ./.:.:.:.:.:.:.:. dDocent_Contig_1444 7 . T G 159155 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=5590;CIGAR=1X;DP=5761;DPB=5761;DPRA=0;EPP=12141.5;EPPR=317.874;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.90161;PAIREDR=0.910345;PAO=0;PQA=0;PQR=0;PRO=0;QA=178936;QR=2024;RO=145;RPL=0;RPP=12141.5;RPPR=317.874;RPR=5590;RUN=1;SAF=5590;SAP=12141.5;SAR=0;SRF=145;SRP=317.874;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:717:18,695:18:262:695:22316:-1983.98,-191.08,0 1/1:845:19,825:19:317:825:26137:-2322.74,-225.486,0 1/1:843:25,814:25:328:814:26442:-2349.17,-223.074,0 1/1:1136:35,1093:35:459:1093:34769:-3086.42,-298.292,0 1/1:803:11,788:11:127:788:25078:-2244.57,-229.153,0 1/1:1417:37,1375:37:531:1375:44194:-3927.75,-377.3,0 dDocent_Contig_1445 19 . A T 125.068 . AB=0.193548;ABP=28.2974;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=691;DPB=691;DPRA=0.399306;EPP=18.2106;EPPR=1488.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=283;QR=27182;RO=684;RPL=0;RPP=18.2106;RPPR=1488.3;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=684;SRP=1488.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:52:52,0:52:2064:0:0:0,-15.6536,-185.942 0/0:84:83,1:83:3294:1:41:0,-21.192,-292.43 0/1:31:25,6:25:1002:6:242:-12.8256,0,-81.1446 0/0:61:61,0:61:2450:0:0:0,-18.3628,-220.641 0/0:181:181,0:181:7173:0:0:0,-54.4864,-645.237 0/0:282:282,0:282:11199:0:0:0,-84.8905,-1007.14 dDocent_Contig_1446 15 . T C 15499.8 . AB=0.416729;ABP=82.9326;AC=6;AF=0.5;AN=12;AO=553;CIGAR=1X;DP=1327;DPB=1327;DPRA=0;EPP=1203.83;EPPR=1681.56;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.9837;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998706;PAO=0;PQA=0;PQR=0;PRO=0;QA=21703;QR=30345;RO=773;RPL=0;RPP=1203.83;RPPR=1681.56;RPR=553;RUN=1;SAF=553;SAP=1203.83;SAR=0;SRF=773;SRP=1681.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:244:190,54:190:7423:54:2129:-118.35,0,-594.31 0/1:199:169,29:169:6596:29:1136:-42.5095,0,-533.374 0/1:118:95,23:95:3779:23:926:-48.1227,0,-304.61 0/1:184:129,55:129:5097:55:2164:-139.552,0,-403.237 0/1:307:114,193:114:4456:193:7497:-582.003,0,-308.6 0/1:275:76,199:76:2994:199:7851:-623.439,0,-186.784 dDocent_Contig_1447 183 . G A 4740.78 . AB=0.509554;ABP=3.25926;AC=6;AF=0.5;AN=12;AO=160;CIGAR=1X;DP=314;DPB=314;DPRA=0;EPP=350.446;EPPR=337.417;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.975;PAIREDR=0.954545;PAO=0;PQA=0;PQR=0;PRO=0;QA=6343;QR=6060;RO=154;RPL=160;RPP=350.446;RPPR=337.417;RPR=0;RUN=1;SAF=0;SAP=350.446;SAR=160;SRF=0;SRP=337.417;SRR=154;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:64:15,49:15:576:49:1940:-155.531,0,-32.9013 0/1:67:37,30:37:1482:30:1194:-87.5671,0,-113.457 0/1:36:12,24:12:474:24:949:-74.8735,0,-32.1713 0/1:60:25,35:25:964:35:1387:-107.02,0,-68.9894 0/1:31:23,8:23:896:8:315:-19.3808,0,-71.6074 0/1:56:42,14:42:1668:14:558:-33.7024,0,-133.487 dDocent_Contig_1448 9 . T C 652.671 . AB=0.226277;ABP=92.1675;AC=6;AF=0.5;AN=12;AO=31;CIGAR=1X;DP=137;DPB=137;DPRA=0;EPP=70.3259;EPPR=233.186;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1203;QR=4054;RO=106;RPL=0;RPP=70.3259;RPPR=233.186;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=106;SRP=233.186;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:13,3:13:500:3:116:-6.00122,0,-40.5313 0/1:15:13,2:13:505:2:78:-2.88802,0,-41.2836 0/1:28:24,4:24:909:4:156:-5.98845,0,-73.6977 0/1:14:7,7:7:273:7:269:-20.3598,0,-20.7236 0/1:33:25,8:25:964:8:312:-18.5109,0,-77.14 0/1:31:24,7:24:903:7:272:-15.5153,0,-72.2508 dDocent_Contig_1449 10 . T G 55526 . AB=0.280014;ABP=1203.93;AC=6;AF=0.5;AN=12;AO=800;CIGAR=1X2M1X3M;DP=2857;DPB=2857;DPRA=0;EPP=1679.92;EPPR=539.364;GTI=0;LEN=1;MEANALT=14.5;MQM=59.8738;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.7775;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=30543;QR=9553;RO=247;RPL=0;RPP=1740.19;RPPR=539.364;RPR=800;RUN=1;SAF=793;SAP=1679.92;SAR=7;SRF=247;SRP=539.364;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:324:24,103,138,26:24:934:103,138,26:3930,5384,1023:-678.365,-363.189,-408.942,-245.642,0,-280.859,-601.576,-355.934,-238.387,-670.509 1|0:559:58,158,244,55:58:2222:158,244,55:6083,9517,2187:-1079.48,-597.505,-732.286,-317.089,0,-425.981,-916.877,-599.788,-319.371,-1082.67 1|0:319:34,80,124,36:34:1339:80,124,36:3012,4825,1421:-518.617,-283.067,-369.142,-135.623,0,-208.454,-411.975,-276.348,-128.903,-511.296 1|0:539:64,141,246,51:64:2487:141,246,51:5388,9608,1978:-1006.73,-583.927,-745.83,-237.716,0,-368.012,-863.501,-625.784,-279.573,-1052.5 1|0:538:46,135,235,59:46:1781:135,235,59:5138,9142,2271:-1011.22,-603.661,-709.32,-275.105,0,-350.661,-838.63,-563.524,-234.968,-967.167 1|0:578:21,183,236,66:21:790:183,236,66:6992,9241,2592:-1262.19,-694.852,-704.481,-508.943,0,-502.618,-1055.36,-546.415,-360.505,-1100.21 dDocent_Contig_1450 100 . N A 3469.46 . AB=0.8;ABP=26.4622;AC=12;AF=1;AN=12;AO=152;CIGAR=6X;DP=162;DPB=641.667;DPRA=0;EPP=333.074;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=35.0724;MQMR=0;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0;PAO=963.5;PQA=29643.5;PQR=0;PRO=0;QA=5168;QR=0;RO=0;RPL=152;RPP=333.074;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=333.074;SAR=152;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:30:0,4,2,24:0:0:4,2,24:126,68,823:-57.9664,-50.197,-48.9929,-54.828,-47.0587,-54.226,-7.76924,0,-4.63107,-0.544521 1|1:28:0,1,0,27:0:0:1,0,27:35,0,910:-56.6075,-56.3702,-56.0692,-56.6075,-56.3702,-56.6075,-8.12781,-7.89084,-8.12781,0 1|1:13:0,0,0,13:0:0:0,0,13:0,0,438:-29.8244,-29.8244,-29.8244,-29.8244,-29.8244,-29.8244,-3.91339,-3.91339,-3.91339,0 1|1:33:0,1,0,32:0:0:1,0,32:35,0,1091:-72.4778,-72.2404,-71.9393,-72.4778,-72.2404,-72.4778,-9.63296,-9.39584,-9.63296,0 1|1:30:0,0,0,30:0:0:0,0,30:0,0,1022:-69.9269,-69.9269,-69.9269,-69.9269,-69.9269,-69.9269,-9.0309,-9.0309,-9.0309,0 1|1:28:0,0,1,26:0:0:0,1,26:0,33,884:-59.8706,-59.8706,-59.8706,-58.3056,-58.3056,-58.0046,-7.82678,-7.82678,-6.26181,0 dDocent_Contig_1451 31 . T A 699.109 . AB=0.179104;ABP=182.789;AC=2;AF=0.166667;AN=12;AO=36;CIGAR=1X;DP=925;DPB=925;DPRA=0.555249;EPP=81.1833;EPPR=1926.93;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997743;PAO=0;PQA=0;PQR=0;PRO=0;QA=1452;QR=33886;RO=886;RPL=0;RPP=81.1833;RPPR=1926.93;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=886;SRP=1926.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:134:133,0:133:5074:0:0:0,-40.037,-456.274 0/0:205:205,0:205:7891:0:0:0,-61.7111,-709.929 0/0:195:195,0:195:7521:0:0:0,-58.7008,-676.643 0/0:190:189,0:189:7143:0:0:0,-56.8947,-642.487 0/1:115:96,18:96:3658:18:729:-31.2177,0,-294.591 0/1:86:68,18:68:2599:18:723:-39.5068,0,-208.194 dDocent_Contig_1452 36 . G A 4497.02 . AB=0.447826;ABP=8.44842;AC=7;AF=0.583333;AN=12;AO=150;CIGAR=1X;DP=281;DPB=281;DPRA=0;EPP=328.731;EPPR=287.473;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5948;QR=5167;RO=131;RPL=0;RPP=328.731;RPPR=287.473;RPR=150;RUN=1;SAF=150;SAP=328.731;SAR=0;SRF=131;SRP=287.473;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:27:12,15:12:448:15:580:-44.4081,0,-32.5222 0/1:65:37,28:37:1466:28:1083:-78.1925,0,-112.622 0/1:31:16,15:16:628:15:605:-45.4563,0,-47.5204 0/1:54:27,27:27:1075:27:1071:-80.4249,0,-80.7869 1/1:51:4,47:4:162:47:1891:-155.427,-0.385575,0 0/1:53:35,18:35:1388:18:718:-48.9901,0,-109.225 dDocent_Contig_1453 18 . G A 24044.8 . AB=0.280255;ABP=1451.7;AC=4;AF=0.333333;AN=12;AO=1117;CIGAR=1X;DP=5465;DPB=5465;DPRA=0;EPP=2428.54;EPPR=9440.23;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99931;PAO=0;PQA=0;PQR=0;PRO=0;QA=44192;QR=172228;RO=4346;RPL=0;RPP=2428.54;RPPR=9440.23;RPR=1117;RUN=1;SAF=1117;SAP=2428.54;SAR=0;SRF=4346;SRP=9440.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:843:777,66:777:30576:66:2601:0,-19.5278,-2515.01 0/0:1168:1085,83:1085:42915:83:3268:0,-57.4031,-3564.28 0/1:828:687,140:687:27292:140:5583:-252.927,0,-2204.51 0/1:1302:1087,214:1087:43109:214:8519:-374.21,0,-3483.81 0/1:522:197,325:197:7904:325:12773:-991.602,0,-553.779 0/1:802:513,289:513:20432:289:11448:-788.149,0,-1595.76 dDocent_Contig_1454 77 . T C 2575.57 . AB=0.153268;ABP=1392.9;AC=2;AF=0.166667;AN=12;AO=328;CIGAR=1X;DP=3429;DPB=3429;DPRA=0;EPP=715.253;EPPR=6732.4;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999355;PAO=0;PQA=0;PQR=0;PRO=0;QA=11791;QR=112178;RO=3099;RPL=328;RPP=715.253;RPPR=6732.4;RPR=0;RUN=1;SAF=328;SAP=715.253;SAR=0;SRF=3099;SRP=6732.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:389:353,36:353:12696:36:1277:0,-1.86707,-1027.2 0/1:523:457,65:457:16229:65:2266:-46.9683,0,-1303.04 0/0:373:342,31:342:12411:31:1119:0,-11.2677,-1015.73 0/0:630:599,31:599:21846:31:1138:0,-86.9193,-1862.69 0/0:706:680,26:680:24732:26:940:0,-127.61,-2140.1 0/1:808:668,139:668:24264:139:5051:-211.402,0,-1939.61 dDocent_Contig_1455 17 . C G 1432.07 . AB=0.119893;ABP=1416.08;AC=2;AF=0.166667;AN=12;AO=135;CIGAR=1X;DP=2940;DPB=2940;DPRA=1.24146;EPP=296.159;EPPR=6087.48;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997502;PAO=0;PQA=0;PQR=0;PRO=0;QA=5364;QR=112596;RO=2802;RPL=0;RPP=296.159;RPPR=6087.48;RPR=135;RUN=1;SAF=135;SAP=296.159;SAR=0;SRF=2802;SRP=6087.48;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:392:390,0:390:15652:0:0:0,-117.402,-1406.99 0/0:528:528,0:528:21130:0:0:0,-158.944,-1899.85 0/0:287:287,0:287:11549:0:0:0,-86.3956,-1038.57 0/0:607:607,0:607:24406:0:0:0,-182.725,-2194.33 0/1:549:471,77:471:18958:77:3060:-110.2,0,-1539.31 0/1:577:519,58:519:20901:58:2304:-33.8201,0,-1705.54 dDocent_Contig_1457 98 . N G 98.0886 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=98;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:2:0,2:0:0:2:63:-5.98383,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_1458 135 . C A 59.006 . AB=0.121951;ABP=53.9075;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=194;DPB=194;DPRA=1.33987;EPP=13.8677;EPPR=411.247;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.87234;PAO=0;PQA=0;PQR=0;PRO=0;QA=202;QR=7508;RO=188;RPL=5;RPP=13.8677;RPPR=411.247;RPR=0;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=411.247;SRR=188;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:31,0:31:1241:0:0:0,-9.33193,-111.96 0/0:35:34,0:34:1359:0:0:0,-10.235,-122.248 0/0:7:7,0:7:275:0:0:0,-2.10721,-25.1169 0/0:30:30,0:30:1203:0:0:0,-9.0309,-108.547 0/0:50:50,0:50:2002:0:0:0,-15.0515,-180.378 0/1:41:36,5:36:1428:5:202:-6.21926,0,-116.43 dDocent_Contig_1459 138 . G T 55.9133 . AB=0.105263;ABP=105.87;AC=3;AF=0.25;AN=12;AO=8;CIGAR=1X;DP=143;DPB=143;DPRA=1.13433;EPP=20.3821;EPPR=296.159;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.837037;PAO=0;PQA=0;PQR=0;PRO=0;QA=321;QR=5429;RO=135;RPL=8;RPP=20.3821;RPPR=296.159;RPR=0;RUN=1;SAF=0;SAP=20.3821;SAR=8;SRF=0;SRP=296.159;SRR=135;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:15:13,2:13:527:2:82:-3.26423,0,-43.2613 0/0:26:26,0:26:1033:0:0:0,-7.82678,-93.2588 0/1:32:29,3:29:1159:3:119:-1.46205,0,-94.9563 0/1:29:26,3:26:1050:3:120:-2.45744,0,-86.0607 0/0:21:21,0:21:852:0:0:0,-6.32163,-76.9899 0/0:20:20,0:20:808:0:0:0,-6.0206,-73.0324 dDocent_Contig_1460 12 . A C 3035.57 . AB=0.134791;ABP=1911.07;AC=3;AF=0.25;AN=12;AO=326;CIGAR=1X;DP=3799;DPB=3799;DPRA=0;EPP=710.91;EPPR=7542.36;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13098;QR=138885;RO=3472;RPL=0;RPP=710.91;RPPR=7542.36;RPR=326;RUN=1;SAF=326;SAP=710.91;SAR=0;SRF=3472;SRP=7542.36;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:346:313,33:313:12503:33:1331:-15.8899,0,-1020.22 0/1:569:505,64:505:20252:64:2554:-58.6992,0,-1649.66 0/0:268:248,20:248:9923:20:802:0,-8.1808,-819.91 0/1:732:606,125:606:24290:125:5013:-230.577,0,-1963.5 0/0:933:911,22:911:36374:22:893:0,-200.185,-3189.6 0/0:951:889,62:889:35543:62:2505:0,-60.6996,-2969.95 dDocent_Contig_1461 107 . N C 26460.6 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=874;CIGAR=1X;DP=874;DPB=874;DPRA=0;EPP=1900.88;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=29379;QR=0;RO=0;RPL=0;RPP=1900.88;RPPR=0;RPR=874;RUN=1;SAF=0;SAP=1900.88;SAR=874;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:43:0,43:0:0:43:1439:-129.801,-12.9443,0 1/1:92:0,92:0:0:92:3124:-281.401,-27.6948,0 1/1:81:0,81:0:0:81:2664:-240.013,-24.3834,0 1/1:91:0,91:0:0:91:3079:-277.352,-27.3937,0 1/1:208:0,208:0:0:208:6978:-628.14,-62.6142,0 1/1:359:0,359:0:0:359:12095:-1088.51,-108.07,0 dDocent_Contig_1462 71 . G C 101.028 . AB=0.114943;ABP=115.053;AC=1;AF=0.0833333;AN=12;AO=21;CIGAR=11M1X2M;DP=381;DPB=374.143;DPRA=1.11379;EPP=48.6112;EPPR=754.34;GTI=0;LEN=1;MEANALT=2.4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.809524;PAIREDR=0.895954;PAO=0;PQA=0;PQR=0;PRO=0;QA=842;QR=13514;RO=346;RPL=21;RPP=48.6112;RPPR=754.34;RPR=0;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=346;SRP=754.34;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:46:41,3,2:41:1595:3,2:85,81:0,-5.6737,-135.83,-5.61451,-130.054,-136.186 0|1:87:74,2,10:74:2878:2,10:71,397:-10.4216,-26.9208,-262.816,0,-230.737,-233.509 0|0:58:54,3,0:54:2126:3,0:81,0:0,-9.72889,-184.028,-16.2556,-184.931,-191.309 0|0:59:54,0,4:54:2090:0,4:0,161:0,-16.2556,-187.971,-2.72887,-174.7,-173.496 0|0:55:53,0,1:53:2068:0,1:0,41:0,-15.9546,-185.923,-12.5656,-182.538,-182.237 0|0:76:70,0,4:70:2757:0,4:0,162:0,-21.0721,-247.91,-7.63761,-234.551,-233.347 dDocent_Contig_1463 8 . C T 4347.24 . AB=0.318761;ABP=159.645;AC=6;AF=0.5;AN=12;AO=175;CIGAR=1X;DP=549;DPB=549;DPRA=0;EPP=383.018;EPPR=815.141;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.954286;PAIREDR=0.951872;PAO=0;PQA=0;PQR=0;PRO=0;QA=6691;QR=14391;RO=374;RPL=0;RPP=383.018;RPPR=815.141;RPR=175;RUN=1;SAF=175;SAP=383.018;SAR=0;SRF=374;SRP=815.141;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:76:45,31:45:1723:31:1159:-81.7199,0,-132.448 0/1:99:84,15:84:3238:15:565:-21.3851,0,-261.759 0/1:82:66,16:66:2524:16:620:-31.4556,0,-202.671 0/1:85:69,16:69:2681:16:620:-30.5527,0,-215.883 0/1:100:45,55:45:1706:55:2123:-161.194,0,-123.691 0/1:107:65,42:65:2519:42:1604:-112.413,0,-194.694 dDocent_Contig_1464 9 . T G 43.476 . AB=0.0912863;ABP=352.689;AC=1;AF=0.0833333;AN=12;AO=45;CIGAR=1X;DP=3124;DPB=3124;DPRA=1.28057;EPP=100.727;EPPR=6680.29;GTI=0;LEN=1;MEANALT=1.8;MQM=60;MQMR=59.9971;NS=6;NUMALT=1;ODDS=0;PAIRED=0.977778;PAIREDR=0.996098;PAO=0;PQA=0;PQR=0;PRO=0;QA=1712;QR=117857;RO=3075;RPL=0;RPP=100.727;RPPR=6680.29;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=3075;SRP=6680.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:241:218,22:218:8357:22:852:-4.36531,0,-679.269 0/0:422:422,0:422:16203:0:0:0,-127.035,-1457.45 0/0:267:256,11:256:9777:11:424:0,-41.8614,-841.085 0/0:508:497,10:497:19049:10:387:0,-117.824,-1678.21 0/0:892:890,1:890:34062:1:39:0,-264.711,-3059.59 0/0:794:792,1:792:30409:1:10:0,-237.962,-2733.82 dDocent_Contig_1465 9 . T G 43.4589 . AB=0.115385;ABP=69.8248;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=264;DPB=264;DPRA=0.638095;EPP=39.9253;EPPR=537.193;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.529412;PAIREDR=0.727642;PAO=0;PQA=0;PQR=0;PRO=0;QA=649;QR=9408;RO=246;RPL=0;RPP=39.9253;RPPR=537.193;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=246;SRP=537.193;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:34,3:34:1305:3:117:0,-0.617386,-106.824 0/0:52:48,4:48:1851:4:156:0,-1.23627,-152.422 0/1:16:14,2:14:542:2:78:-2.58699,0,-44.3096 0/0:59:55,4:55:2071:4:153:0,-3.61916,-172.477 0/1:36:32,4:32:1227:4:145:-2.56666,0,-99.888 0/0:63:63,0:63:2412:0:0:0,-18.9649,-217.289 dDocent_Contig_1466 98 . N G 119.426 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=117;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:52:-4.93894,-0.60206,0 dDocent_Contig_1467 10 . C G 8136.82 . AB=0.279863;ABP=496.327;AC=6;AF=0.5;AN=12;AO=328;CIGAR=1X;DP=1172;DPB=1172;DPRA=0;EPP=715.253;EPPR=1831.39;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998812;PAO=0;PQA=0;PQR=0;PRO=0;QA=12996;QR=33622;RO=842;RPL=0;RPP=715.253;RPPR=1831.39;RPR=328;RUN=1;SAF=328;SAP=715.253;SAR=0;SRF=842;SRP=1831.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:132:70,61:70:2759:61:2344:-171.286,0,-208.596 0/1:166:119,47:119:4752:47:1892:-120.512,0,-377.61 0/1:321:253,68:253:10153:68:2703:-146.76,0,-816.452 0/1:231:157,73:157:6252:73:2904:-191.806,0,-492.787 0/1:158:107,51:107:4269:51:2039:-136.134,0,-336.595 0/1:164:136,28:136:5437:28:1114:-51.1809,0,-439.791 dDocent_Contig_1468 1 . N G 355.945 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=10;CIGAR=1X;DP=10;DPB=10;DPRA=0;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=56.7;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=364;QR=0;RO=0;RPL=0;RPP=24.725;RPPR=0;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:40:-3.99568,-0.30103,0 1/1:1:0,1:0:0:1:40:-3.99568,-0.30103,0 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 1/1:3:0,3:0:0:3:119:-11.0925,-0.90309,0 1/1:3:0,3:0:0:3:116:-10.7399,-0.90309,0 1/1:1:0,1:0:0:1:8:-0.799998,-0.30103,0 dDocent_Contig_1469 1 . N G 76.0882 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.21888;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=80;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:80:-7.59179,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1470 10 . G A 67995.5 . AB=0.441055;ABP=164.286;AC=6;AF=0.5;AN=12;AO=2357;CIGAR=1X1M1X;DP=5344;DPB=5344;DPRA=0;EPP=5121.17;EPPR=6467.48;GTI=0;LEN=1;MEANALT=2.5;MQM=59.9805;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999576;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=93536;QR=117688;RO=2977;RPL=0;RPP=5121.17;RPPR=6467.48;RPR=2357;RUN=1;SAF=2357;SAP=5121.17;SAR=0;SRF=2977;SRP=6467.48;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:764:562,199:562:22230:199:7915:-482.594,0,-1769.58 0|1:917:692,222:692:27350:222:8784:-514.694,0,-2183.88 0|1:684:500,181:500:19842:181:7213:-443.436,0,-1578.84 0|1:1123:859,264:859:33903:264:10421:-598.447,0,-2710.38 0|1:827:141,686:141:5580:686:27248:-2201.06,0,-253.107 0|1:1029:223,805:223:8783:805:31955:-2563.32,0,-480.164 dDocent_Contig_1471 98 . N A 374.155 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=18;CIGAR=1X;DP=20;DPB=20;DPRA=0;EPP=42.0968;EPPR=0;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=399;QR=0;RO=0;RPL=18;RPP=42.0968;RPPR=0;RPR=0;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,2:0:0:2:46:-4.24651,-0.60206,0 1/1:3:0,3:0:0:3:84:-7.83919,-0.90309,0 1/1:7:0,7:0:0:7:211:-19.2867,-2.10721,0 1/1:4:0,4:0:0:4:44:-4.06997,-1.20412,0 1/1:3:0,2:0:0:2:14:-1.26,-0.60206,0 dDocent_Contig_1473 21 . G T 77236.5 . AB=0.894737;ABP=363.018;AC=11;AF=0.916667;AN=12;AO=2251;CIGAR=1X;DP=2350;DPB=2350;DPRA=0;EPP=4890.99;EPPR=215.815;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.9964;MQMR=59.9082;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=89594;QR=3871;RO=98;RPL=0;RPP=4890.99;RPPR=215.815;RPR=2251;RUN=1;SAF=2251;SAP=4890.99;SAR=0;SRF=98;SRP=215.815;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:266:28,238:28:1077:238:9474:-771.993,0,-17.143 1/1:372:0,372:0:0:372:14705:-1322.35,-111.983,0 1/1:533:26,507:26:1041:507:20254:-1727.16,-66.4917,0 1/1:332:13,319:13:518:319:12775:-1101.83,-52.9783,0 1/1:383:21,362:21:829:362:14416:-1221.4,-40.3718,0 1/1:464:10,453:10:406:453:17970:-1578.95,-102.886,0 dDocent_Contig_1474 36 . G T 249.377 . AB=0.0899251;ABP=1757.23;AC=2;AF=0.166667;AN=12;AO=153;CIGAR=1X;DP=4232;DPB=4232;DPRA=0.752812;EPP=335.246;EPPR=8845.25;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6067;QR=161762;RO=4072;RPL=0;RPP=335.246;RPPR=8845.25;RPR=153;RUN=1;SAF=153;SAP=335.246;SAR=0;SRF=4072;SRP=8845.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:524:468,51:468:18577:51:2015:-24.9123,0,-1513.78 0/0:645:608,37:608:24217:37:1465:0,-62.0728,-2045.33 0/1:677:619,57:619:24610:57:2270:-0.592494,0,-2008.9 0/0:697:688,8:688:27290:8:317:0,-181.004,-2424.81 0/0:838:838,0:838:33331:0:0:0,-252.263,-2996.74 0/0:851:851,0:851:33737:0:0:0,-256.177,-3033.27 dDocent_Contig_1475 18 . T A 2082.75 . AB=0.228856;ABP=259.719;AC=1;AF=0.0833333;AN=12;AO=146;CIGAR=1X;DP=2131;DPB=2131;DPRA=0.773059;EPP=320.045;EPPR=4309.04;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999496;PAO=0;PQA=0;PQR=0;PRO=0;QA=5803;QR=79084;RO=1983;RPL=0;RPP=320.045;RPPR=4309.04;RPR=146;RUN=1;SAF=146;SAP=320.045;SAR=0;SRF=1983;SRP=4309.04;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:299:278,21:278:11122:21:850:0,-13.1972,-923.384 0/0:438:438,0:438:17429:0:0:0,-131.851,-1567.21 0/0:236:230,5:230:9202:5:197:0,-52.7862,-809.545 0/0:392:391,1:391:15483:1:11:0,-116.904,-1391.15 0/0:364:337,27:337:13439:27:1085:0,-11.6362,-1110.54 0/1:402:309,92:309:12409:92:3660:-208.594,0,-995.048 dDocent_Contig_1476 7 . A T 9048.54 . AB=0.474551;ABP=6.76812;AC=6;AF=0.5;AN=12;AO=317;CIGAR=1X1M;DP=668;DPB=668;DPRA=0;EPP=691.367;EPPR=621.88;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.982456;PAO=0;PQA=0;PQR=0;PRO=0;QA=12033;QR=10813;RO=285;RPL=0;RPP=691.367;RPPR=621.88;RPR=317;RUN=1;SAF=317;SAP=691.367;SAR=0;SRF=285;SRP=621.88;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:146:66,15,65:66:2512:15,65:577,2486:-184.127,-156.621,-358.143,0,-158.662,-186.468 0|1:145:54,13,78:54:2051:13,78:496,2953:-225.823,-201.386,-365.668,0,-127.5,-144.713 0|1:76:17,2,57:17:633:2,57:75,2172:-173.056,-172.031,-223.241,0,-45.6678,-34.6527 0|1:119:38,5,76:38:1442:5,76:190,2886:-225.223,-221.08,-337.818,0,-102.661,-95.365 0|1:112:68,23,21:68:2581:23,21:877,782:-51.4804,0,-204.727,-7.94829,-147.646,-213.27 0|1:70:42,8,20:42:1594:8,20:304,754:-49.1417,-36.8525,-165.155,0,-105.777,-124.688 dDocent_Contig_1477 55 . A T 1485.73 . AB=0.0978648;ABP=1581.8;AC=4;AF=0.333333;AN=12;AO=115;CIGAR=4M1X2M;DP=1383;DPB=1418.57;DPRA=0;EPP=252.73;EPPR=2552.32;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.982609;PAIREDR=0.992334;PAO=0;PQA=0;PQR=0;PRO=0;QA=4535;QR=45430;RO=1174;RPL=115;RPP=252.73;RPPR=2552.32;RPR=0;RUN=1;SAF=115;SAP=252.73;SAR=0;SRF=1174;SRP=2552.32;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:188:146,17,24:146:5647:17,24:597,956:-34.7967,-30.1825,-488.877,0,-415.271,-456.626 0|1:296:266,2,25:266:10267:2,25:49,992:-1.73953,-78.0181,-920.552,0,-839.495,-835.772 0|1:149:118,16,14:118:4572:16,14:532,550:-9.73703,-2.24379,-373.01,0,-332.595,-371.417 0|1:252:207,8,35:207:7999:8,35:265,1400:-53.0734,-93.9651,-748.494,0,-635.581,-646.475 0|0:259:248,2,5:248:9577:2,5:75,196:0,-68.5096,-854.433,-58.5163,-838.919,-843.557 0|0:239:189,37,12:189:7368:37,12:1339,441:-52.4187,0,-594.502,-73.2718,-569.602,-675.287 dDocent_Contig_1478 39 . T C 47278.7 . AB=0.419869;ABP=223.646;AC=6;AF=0.5;AN=12;AO=1661;CIGAR=1X2M;DP=3956;DPB=3956;DPRA=0;EPP=3601.15;EPPR=4458.87;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.999398;PAIREDR=0.999513;PAO=0;PQA=0;PQR=0;PRO=0;QA=65059;QR=75702;RO=2052;RPL=1;RPP=3601.15;RPPR=4458.87;RPR=1660;RUN=1;SAF=1661;SAP=3609.83;SAR=0;SRF=2052;SRP=4458.87;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:646:386,0,258:386:14240:0,258:0,10109:-715.186,-831.384,-1995.9,0,-1164.76,-1087.09 0|1:629:387,0,240:387:14344:0,240:0,9441:-660.163,-776.661,-1950.23,0,-1173.7,-1101.46 0|1:484:267,0,216:267:9936:0,216:0,8501:-619.155,-699.53,-1512.75,0,-813.519,-748.496 0|1:663:484,0,178:484:17768:0,178:0,6957:-426.157,-571.856,-2024.24,0,-1452.36,-1398.78 0|1:820:259,106,453:259:9449:106,453:4181,17728:-1379.45,-1113.44,-1853.41,0,-427.884,-635.5 0|1:714:269,127,316:269:9965:127,316:5057,12323:-931.758,-596.345,-1373.38,0,-398.86,-720.132 dDocent_Contig_1479 66 . C G 115.405 . AB=0.352941;ABP=6.20364;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=84;DPB=84;DPRA=1.26866;EPP=16.0391;EPPR=172.385;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=182;QR=2758;RO=78;RPL=6;RPP=16.0391;RPPR=172.385;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=78;SRP=172.385;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:17:11,6:11:394:6:182:-11.5578,0,-30.6833 0/0:10:10,0:10:350:0:0:0,-3.0103,-31.8365 0/0:14:14,0:14:514:0:0:0,-4.21442,-46.601 0/0:28:28,0:28:970:0:0:0,-8.42884,-87.6067 0/0:5:5,0:5:179:0:0:0,-1.50515,-16.4604 0/0:10:10,0:10:351:0:0:0,-3.0103,-31.9275 dDocent_Contig_1480 17 . C A 23685.9 . AB=0.75549;ABP=390.254;AC=8;AF=0.666667;AN=12;AO=725;CIGAR=1X;DP=892;DPB=892;DPRA=0;EPP=1577.33;EPPR=363.475;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.998621;PAIREDR=0.993976;PAO=0;PQA=0;PQR=0;PRO=0;QA=28635;QR=6562;RO=166;RPL=0;RPP=1577.33;RPPR=363.475;RPR=725;RUN=1;SAF=725;SAP=1577.33;SAR=0;SRF=166;SRP=363.475;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:215:36,179:36:1430:179:6989:-564.01,0,-64.2352 1/1:141:0,141:0:0:141:5587:-502.669,-42.4452,0 1/1:68:0,68:0:0:68:2724:-245.279,-20.47,0 0/1:210:36,174:36:1442:174:6862:-554.087,0,-66.8147 0/1:116:39,76:39:1514:76:3011:-236.064,0,-101.485 0/1:142:55,87:55:2176:87:3462:-268.888,0,-153.27 dDocent_Contig_1481 10 . C A 1203.02 . AB=0.0212072;ABP=1223.6;AC=0;AF=0;AN=12;AO=30;CIGAR=1X2M1X;DP=1042;DPB=1042;DPRA=0;EPP=68.1545;EPPR=1824.89;GTI=0;LEN=1;MEANALT=5.66667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.7;PAIREDR=0.888493;PAO=0;PQA=0;PQR=0;PRO=0;QA=1174;QR=33139;RO=843;RPL=0;RPP=68.1545;RPPR=1833.56;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=842;SRP=1824.89;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:132:101,3,2,19:101:3943:3,2,19:119,79,734:-29.8773,-50.4846,-373.688,-53.7802,-368.09,-377.284,0,-314.31,-317.605,-318.386 0|0:147:119,3,3,20:119:4716:3,3,20:118,120,769:-27.2976,-53.4129,-440.683,-53.2337,-431.701,-440.505,0,-378.458,-378.279,-382.144 0|0:254:226,5,2,18:226:8862:5,2,18:197,82,684:0,-51.8236,-779.047,-61.2629,-773.783,-789.389,-11.96,-724.466,-733.906,-735.256 0|0:173:122,3,10,30:122:4790:3,10,30:115,402,1159:-58.4462,-85.7336,-478.761,-62.0416,-446.535,-452.964,0,-384.486,-360.796,-384.893 0|0:161:138,4,3,15:138:5428:4,3,15:157,114,591:-7.08643,-35.7156,-480.994,-39.282,-472.85,-484.859,0,-433.576,-437.14,-441.973 0|0:175:137,12,2,12:137:5400:12,2,12:468,75,465:0,-2.77342,-443.411,-35.0999,-440.882,-478.748,-3.04384,-408.825,-441.151,-443.681 dDocent_Contig_1482 13 . T A 8198.5 . AB=0.215819;ABP=1244.6;AC=4;AF=0.333333;AN=12;AO=423;CIGAR=1X;DP=3020;DPB=3020;DPRA=0;EPP=921.543;EPPR=5635.81;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=16678;QR=103714;RO=2594;RPL=0;RPP=921.543;RPPR=5635.81;RPR=423;RUN=1;SAF=423;SAP=921.543;SAR=0;SRF=2594;SRP=5635.81;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:432:356,76:356:14218:76:3006:-140.591,0,-1148.5 0/1:411:353,58:353:14132:58:2271:-80.8344,0,-1147.08 0/1:443:288,155:288:11527:155:6175:-422.167,0,-903.238 0/1:484:390,93:390:15639:93:3604:-178.663,0,-1260.51 0/0:515:489,24:489:19495:24:946:0,-69.3887,-1667.49 0/0:735:718,17:718:28703:17:676:0,-160.086,-2519.48 dDocent_Contig_1483 73 . A T 107.247 . AB=0.155844;ABP=82.2267;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=177;DPB=177;DPRA=1.54;EPP=29.068;EPPR=361.303;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993939;PAO=0;PQA=0;PQR=0;PRO=0;QA=379;QR=5496;RO=165;RPL=12;RPP=29.068;RPPR=361.303;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=165;SRP=361.303;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:603:0:0:0,-5.41854,-54.5881 0/0:15:15,0:15:500:0:0:0,-4.51545,-45.3189 0/0:52:52,0:52:1748:0:0:0,-15.6536,-157.604 0/1:68:58,10:58:1895:10:319:-8.5485,0,-150.357 0/0:15:15,0:15:517:0:0:0,-4.51545,-46.8581 0/1:9:7,2:7:233:2:60:-2.9893,0,-18.5875 dDocent_Contig_1484 35 . T A 129.287 . AB=0.11194;ABP=178.284;AC=1;AF=0.0833333;AN=12;AO=31;CIGAR=1X;DP=655;DPB=655;DPRA=1.98106;EPP=70.3259;EPPR=1355.84;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.806452;PAIREDR=0.756019;PAO=0;PQA=0;PQR=0;PRO=0;QA=1203;QR=24893;RO=623;RPL=0;RPP=70.3259;RPPR=1355.84;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=623;SRP=1355.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:78:76,2:76:3045:2:79:0,-15.9831,-266.635 0/0:109:102,7:102:4074:7:274:0,-7.78397,-341.598 0/0:40:40,0:40:1617:0:0:0,-12.0412,-145.756 0/0:92:92,0:92:3685:0:0:0,-27.6948,-331.664 0/1:134:118,15:118:4696:15:592:-13.2475,0,-382.191 0/0:202:195,7:195:7776:7:258:0,-37.2408,-675.858 dDocent_Contig_1485 16 . G A 57267 . AB=0.414368;ABP=125.364;AC=12;AF=1;AN=12;AO=796;CIGAR=1X3M;DP=1921;DPB=1921;DPRA=0;EPP=1731.5;EPPR=157.185;GTI=0;LEN=1;MEANALT=3.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.11022e-16;PAIRED=0.942211;PAIREDR=0.985915;PAO=0;PQA=0;PQR=0;PRO=0;QA=31751;QR=2701;RO=71;RPL=0;RPP=1731.5;RPPR=157.185;RPR=796;RUN=1;SAF=796;SAP=1731.5;SAR=0;SRF=71;SRP=157.185;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:355:16,195,141:16:610:195,141:7609,5593:-1030.93,-410.334,-401.671,-575.384,0,-582.977 1|1:399:12,194,191:12:462:194,191:7631,7615:-1213.25,-589.18,-568.713,-589.776,0,-570.212 1|1:188:6,78,103:6:233:78,103:3086,4141:-574.277,-322.114,-317.778,-234.831,0,-222.97 1|1:352:18,193,138:18:683:193,138:7594,5486:-1014.9,-395.665,-393.569,-568.668,0,-583.129 1|1:298:15,159,119:15:574:159,119:6248,4748:-853.279,-343.923,-343.159,-466.783,0,-478.061 1|1:329:4,221,104:4:139:221,104:8692,4168:-1044.06,-332.129,-276.897,-701.89,0,-681.879 dDocent_Contig_1486 40 . T G 2367.86 . AB=0.147114;ABP=1164.7;AC=4;AF=0.333333;AN=12;AO=185;CIGAR=1X;DP=1592;DPB=1592;DPRA=0;EPP=404.733;EPPR=3053.93;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.998577;PAO=0;PQA=0;PQR=0;PRO=0;QA=7290;QR=55645;RO=1405;RPL=0;RPP=404.733;RPPR=3053.93;RPR=185;RUN=1;SAF=185;SAP=404.733;SAR=0;SRF=1405;SRP=3053.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:375:310,65:310:12167:65:2538:-115.68,0,-981.322 0/0:343:325,18:325:12899:18:701:0,-39.8369,-1096.58 0/1:187:161,26:161:6383:26:1030:-36.6975,0,-517.926 0/1:301:265,36:265:10493:36:1445:-39.6887,0,-853.097 0/1:211:178,31:178:7093:31:1224:-47.1248,0,-574.713 0/0:175:166,9:166:6610:9:352:0,-20.6414,-562.581 dDocent_Contig_1487 19 . C T 2019.43 . AB=0.665105;ABP=104.113;AC=2;AF=0.166667;AN=12;AO=290;CIGAR=1X3M1X;DP=873;DPB=873;DPRA=1.78409;EPP=632.737;EPPR=1255.95;GTI=0;LEN=1;MEANALT=2;MQM=12.9621;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.857886;PAO=0;PQA=0;PQR=0;PRO=0;QA=11483;QR=22618;RO=577;RPL=0;RPP=632.737;RPPR=1255.95;RPR=290;RUN=1;SAF=290;SAP=632.737;SAR=0;SRF=577;SRP=1255.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:78:76,2:76:2995:2:81:0,-21.0117,-267.192 0|0:155:150,1:150:5852:1:38:0,-44.5097,-525.272 0|0:88:88,0:88:3486:0:0:0,-26.4906,-313.802 0|0:125:122,3:122:4765:3:117:0,-33.9917,-425.175 0|1:166:46,119:46:1813:119:4696:-89.257,0,-113.316 0|1:261:95,165:95:3707:165:6551:-113.499,0,-255.058 dDocent_Contig_1488 8 . C T 1800.92 . AB=0.262626;ABP=148.367;AC=6;AF=0.5;AN=12;AO=78;CIGAR=1X1M1X;DP=297;DPB=297;DPRA=0;EPP=172.385;EPPR=474.22;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.641026;PAIREDR=0.391705;PAO=0;PQA=0;PQR=0;PRO=0;QA=3013;QR=8354;RO=217;RPL=0;RPP=172.385;RPPR=474.22;RPR=78;RUN=1;SAF=78;SAP=172.385;SAR=0;SRF=217;SRP=474.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:29:24,5:24:929:5:190:-8.73687,0,-75.1959 0|1:46:37,9:37:1416:9:346:-17.652,0,-113.875 0|1:24:21,3:21:816:3:116:-3.59298,0,-66.5404 0|1:51:32,17:32:1232:17:662:-44.8038,0,-96.0627 0|1:77:59,18:59:2270:18:696:-39.7944,0,-181.337 0|1:70:44,26:44:1691:26:1003:-69.5089,0,-131.378 dDocent_Contig_1489 38 . G A 4661.24 . AB=0.457386;ABP=8.56236;AC=3;AF=0.25;AN=12;AO=162;CIGAR=1X;DP=1047;DPB=1047;DPRA=0.321821;EPP=354.789;EPPR=1924.76;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9672;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99887;PAO=0;PQA=0;PQR=0;PRO=0;QA=6408;QR=34729;RO=885;RPL=0;RPP=354.789;RPPR=1924.76;RPR=162;RUN=1;SAF=162;SAP=354.789;SAR=0;SRF=885;SRP=1924.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:117:53,64:53:2075:64:2533:-192.904,0,-151.718 0/1:177:115,62:115:4504:62:2441:-166.568,0,-352.036 0/1:58:23,35:23:895:35:1394:-108.262,0,-63.3981 0/0:58:57,1:57:2215:1:40:0,-13.4641,-194.845 0/0:404:404,0:404:15907:0:0:0,-121.616,-1430.51 0/0:233:233,0:233:9133:0:0:0,-70.14,-821.502 dDocent_Contig_1491 62 . G A 482.737 . AB=0.234234;ABP=71.1085;AC=4;AF=0.333333;AN=12;AO=28;CIGAR=1X;DP=164;DPB=164;DPRA=1.62222;EPP=63.8115;EPPR=298.331;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.785714;PAIREDR=0.808824;PAO=0;PQA=0;PQR=0;PRO=0;QA=991;QR=4939;RO=136;RPL=0;RPP=63.8115;RPPR=298.331;RPR=28;RUN=1;SAF=0;SAP=63.8115;SAR=28;SRF=0;SRP=298.331;SRR=136;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:10,15:10:367:15:529:-40.4163,0,-25.8526 0/1:32:28,4:28:1022:4:144:-3.68042,0,-82.6601 0/0:18:18,0:18:654:0:0:0,-5.41854,-59.1918 0/0:35:33,2:33:1192:2:72:0,-3.69933,-100.744 0/1:28:24,4:24:865:4:141:-4.60819,0,-69.741 0/1:26:23,3:23:839:3:105:-1.96919,0,-68.0069 dDocent_Contig_1492 37 . G C 32033.1 . AB=0.531789;ABP=20.8198;AC=6;AF=0.5;AN=12;AO=1079;CIGAR=1X;DP=2029;DPB=2029;DPRA=0;EPP=2346.03;EPPR=2052.88;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.99722;PAIREDR=0.996822;PAO=0;PQA=0;PQR=0;PRO=0;QA=42442;QR=36887;RO=944;RPL=0;RPP=2346.03;RPPR=2052.88;RPR=1079;RUN=1;SAF=1079;SAP=2346.03;SAR=0;SRF=944;SRP=2052.88;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:269:149,119:149:5846:119:4616:-334.541,0,-445.136 0/1:367:210,156:210:8166:156:6109:-439.032,0,-623.991 0/1:213:90,122:90:3525:122:4822:-369.68,0,-253.083 0/1:386:251,135:251:9817:135:5325:-362.929,0,-766.792 0/1:426:166,258:166:6499:258:10222:-791.388,0,-456.706 0/1:368:78,289:78:3034:289:11348:-909.732,0,-162.305 dDocent_Contig_1493 10 . T C 55405.5 . AB=0.833732;ABP=1620.52;AC=7;AF=0.583333;AN=12;AO=1678;CIGAR=1X1M;DP=1966;DPB=1966;DPRA=0;EPP=3620.73;EPPR=545.878;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.989273;PAIREDR=0.98;PAO=0;PQA=0;PQR=0;PRO=0;QA=67525;QR=9997;RO=250;RPL=0;RPP=3646.74;RPPR=545.878;RPR=1678;RUN=1;SAF=1675;SAP=3620.73;SAR=3;SRF=250;SRP=545.878;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:200:37,0,163:37:1468:0,163:0,6570:-530.775,-541.913,-662.752,0,-121.236,-72.1681 0|1:231:19,0,211:19:771:0,211:0,8488:-693.766,-699.486,-763.071,0,-63.581,-0.0636745 0|1:201:25,0,173:25:1007:0,173:0,7002:-569.794,-577.319,-660.316,0,-82.9937,-30.9155 1|1:294:10,0,284:10:399:0,284:0,11461:-994.384,-997.394,-1030.25,-52.2355,-85.4925,0 0|1:582:84,0,498:84:3335:0,498:0,19961:-1619.55,-1644.84,-1919.36,0,-274.917,-125.004 0|1:458:75,33,349:75:3017:33,349:1314,14043:-1134.73,-1049.11,-1287.81,0,-140.44,-143.575 dDocent_Contig_1494 98 . N T 804.6 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=27;CIGAR=4X;DP=29;DPB=29.5;DPRA=0;EPP=61.6401;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=1;PQA=36;PQR=0;PRO=0;QA=891;QR=0;RO=0;RPL=27;RPP=61.6401;RPPR=0;RPR=0;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:15:0,13:0:0:13:440:-39.6157,-3.91339,0 1|1:14:0,14:0:0:14:451:-40.5432,-4.21442,0 dDocent_Contig_1495 60 . G A 13211.3 . AB=0.390767;ABP=128.725;AC=5;AF=0.416667;AN=12;AO=487;CIGAR=1X;DP=1667;DPB=1667;DPRA=0;EPP=893.934;EPPR=2504.91;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.917864;PAIREDR=0.988136;PAO=0;PQA=0;PQR=0;PRO=0;QA=19251;QR=44410;RO=1180;RPL=487;RPP=1060.52;RPPR=2565.35;RPR=0;RUN=1;SAF=467;SAP=893.934;SAR=20;SRF=1173;SRP=2504.91;SRR=7;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:131:25,106:25:955:106:4209:-339.346,0,-46.8183 0/1:212:151,61:151:5686:61:2337:-146.677,0,-447.827 0/1:158:79,79:79:3079:79:3155:-236.469,0,-229.666 0/1:318:136,182:136:5104:182:7244:-555.888,0,-363.604 0/1:394:348,46:348:13173:46:1826:-45.9508,0,-1066.28 0/0:454:441,13:441:16413:13:480:0,-93.1397,-1432.74 dDocent_Contig_1496 10 . T C 5483.13 . AB=0.630435;ABP=43.7962;AC=6;AF=0.5;AN=12;AO=174;CIGAR=1X1M;DP=276;DPB=276;DPRA=0;EPP=380.846;EPPR=202.786;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=0.54023;PAIREDR=0.543478;PAO=0;PQA=0;PQR=0;PRO=0;QA=7017;QR=3701;RO=92;RPL=0;RPP=380.846;RPPR=202.786;RPR=174;RUN=1;SAF=174;SAP=380.846;SAR=0;SRF=92;SRP=202.786;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:51:18,0,33:18:725:0,33:0,1339:-105.415,-110.833,-170.584,0,-60.1543,-50.2203 0|1:49:11,7,31:11:448:7,31:270,1236:-98.4793,-79.6267,-114.48,0,-14.8131,-27.6391 0|1:35:15,0,20:15:598:0,20:0,817:-63.3071,-67.8226,-117.063,0,-49.6432,-43.6226 0|1:52:8,3,41:8:327:3,41:123,1642:-132.847,-125.102,-151.184,0,-16.8302,-14.6405 0|1:34:12,0,22:12:485:0,22:0,894:-70.5296,-74.142,-114.127,0,-40.3895,-33.7668 0|1:55:28,0,27:28:1118:0,27:0,1089:-81.7329,-90.1617,-182.237,0,-92.4761,-84.3483 dDocent_Contig_1497 64 . G T 631.485 . AB=0.298851;ABP=33.5856;AC=4;AF=0.333333;AN=12;AO=27;CIGAR=1X;DP=132;DPB=132;DPRA=1.12;EPP=61.6401;EPPR=228.843;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.961538;PAO=0;PQA=0;PQR=0;PRO=0;QA=1041;QR=3778;RO=104;RPL=27;RPP=61.6401;RPPR=228.843;RPR=0;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=104;SRP=228.843;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:721:0:0:0,-6.0206,-65.2169 0/0:25:24,1:24:848:1:37:0,-3.82792,-72.9362 0/1:44:37,7:37:1356:7:273:-11.6927,0,-109.078 0/1:11:9,2:9:347:2:77:-3.99781,0,-28.2786 0/1:21:7,13:7:257:13:498:-38.7573,0,-17.0761 0/1:11:7,4:7:249:4:156:-11.106,0,-19.4432 dDocent_Contig_1498 18 . G A 550.042 . AB=0.202899;ABP=108.815;AC=1;AF=0.0833333;AN=12;AO=48;CIGAR=1X;DP=1029;DPB=1029;DPRA=0.604077;EPP=107.241;EPPR=2131.05;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1843;QR=38514;RO=980;RPL=0;RPP=107.241;RPPR=2131.05;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=980;SRP=2131.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:130:122,8:122:4806:8:312:0,-10.6917,-404.011 0/0:155:153,1:153:5984:1:37:0,-42.9357,-534.775 0/0:140:129,11:129:5114:11:421:0,-3.90969,-421.892 0/1:138:110,28:110:4293:28:1073:-55.323,0,-344.807 0/0:247:247,0:247:9687:0:0:0,-74.3544,-871.293 0/0:219:219,0:219:8630:0:0:0,-65.9256,-776.231 dDocent_Contig_1499 63 . A C 15043.7 . AB=0.528846;ABP=6.01695;AC=8;AF=0.666667;AN=12;AO=469;CIGAR=1X;DP=666;DPB=666;DPRA=0;EPP=1021.43;EPPR=428.619;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997868;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=18127;QR=7616;RO=196;RPL=469;RPP=1021.43;RPPR=428.619;RPR=0;RUN=1;SAF=469;SAP=1021.43;SAR=0;SRF=196;SRP=428.619;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:111:66,45:66:2562:45:1763:-125.479,0,-197.314 0/1:111:75,36:75:2917:36:1370:-90.1498,0,-229.229 0/1:128:47,81:47:1821:81:3110:-241.46,0,-125.578 0/1:66:8,58:8:316:58:2264:-184.067,0,-8.93656 1/1:178:0,177:0:0:177:6879:-618.792,-53.2823,0 1/1:72:0,72:0:0:72:2741:-246.83,-21.6742,0 dDocent_Contig_1500 12 . G A 162.588 . AB=0.126214;ABP=128.007;AC=3;AF=0.25;AN=12;AO=16;CIGAR=1X;DP=239;DPB=239;DPRA=0.939759;EPP=37.7539;EPPR=487.249;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.4375;PAIREDR=0.695067;PAO=0;PQA=0;PQR=0;PRO=0;QA=653;QR=8896;RO=223;RPL=0;RPP=37.7539;RPPR=487.249;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=223;SRP=487.249;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:30,3:30:1180:3:123:-1.5308,0,-96.5417 0/0:53:50,3:50:1993:3:123:0,-4.4898,-168.094 0/1:34:28,6:28:1131:6:245:-12.1945,0,-91.8335 0/0:37:37,0:37:1492:0:0:0,-11.1381,-134.52 0/1:36:32,4:32:1249:4:162:-4.12988,0,-101.843 0/0:46:46,0:46:1851:0:0:0,-13.8474,-166.794 dDocent_Contig_1501 18 . G A 5191.51 . AB=0.242196;ABP=539.313;AC=3;AF=0.25;AN=12;AO=268;CIGAR=1X;DP=1604;DPB=1604;DPRA=0;EPP=584.965;EPPR=2901.93;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=59.9978;NS=6;NUMALT=1;ODDS=0;PAIRED=0.992537;PAIREDR=0.985019;PAO=0;PQA=0;PQR=0;PRO=0;QA=10565;QR=51901;RO=1335;RPL=0;RPP=584.965;RPPR=2901.93;RPR=268;RUN=1;SAF=268;SAP=584.965;SAR=0;SRF=1335;SRP=2901.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:258:236,22:236:9081:22:864:-0.407311,0,-739.176 0/0:234:215,19:215:8390:19:724:0,-4.96363,-689.189 0/0:162:158,4:158:6157:4:156:0,-34.3507,-539.535 0/0:279:259,20:259:10123:20:802:0,-11.4887,-838.02 0/1:290:226,63:226:8836:63:2460:-134.465,0,-707.695 0/1:381:241,140:241:9314:140:5559:-385.47,0,-723.109 dDocent_Contig_1502 18 . G A 3756.13 . AB=0.277174;ABP=241.07;AC=6;AF=0.5;AN=12;AO=153;CIGAR=1X;DP=552;DPB=552;DPRA=0;EPP=335.246;EPPR=867.256;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.764706;PAIREDR=0.811558;PAO=0;PQA=0;PQR=0;PRO=0;QA=6044;QR=15476;RO=398;RPL=0;RPP=335.246;RPPR=867.256;RPR=153;RUN=1;SAF=153;SAP=335.246;SAR=0;SRF=398;SRP=867.256;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:89:55,34:55:2123:34:1337:-93.806,0,-164.482 0/1:91:70,20:70:2783:20:797:-44.7086,0,-223.26 0/1:69:46,23:46:1773:23:923:-62.6048,0,-139.02 0/1:112:85,27:85:3305:27:1054:-61.4224,0,-263.807 0/1:77:56,21:56:2176:21:805:-49.5825,0,-172.856 0/1:114:86,28:86:3316:28:1128:-67.4857,0,-264.214 dDocent_Contig_1503 27 . T C 12090.2 . AB=0.554348;ABP=21.8927;AC=6;AF=0.5;AN=12;AO=408;CIGAR=1X;DP=736;DPB=736;DPRA=0;EPP=888.971;EPPR=713.082;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=15930;QR=12751;RO=327;RPL=0;RPP=888.971;RPPR=713.082;RPR=408;RUN=1;SAF=408;SAP=888.971;SAR=0;SRF=327;SRP=713.082;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:136:49,87:49:1910:87:3394:-264.589,0,-131.178 0/1:108:46,62:46:1770:62:2409:-184.467,0,-127.014 0/1:69:20,49:20:792:49:1905:-150.887,0,-50.8294 0/1:119:54,65:54:2085:65:2570:-195.621,0,-152.027 0/1:158:74,84:74:2899:84:3253:-245.285,0,-213.471 0/1:146:84,61:84:3295:61:2399:-172.173,0,-252.739 dDocent_Contig_1504 11 . T C 548.451 . AB=0.0561798;ABP=764.368;AC=6;AF=0.5;AN=12;AO=30;CIGAR=1X2M14I25M;DP=1648;DPB=1566.43;DPRA=0.623645;EPP=68.1545;EPPR=845.542;GTI=0;LEN=1;MEANALT=8;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1184;QR=15202;RO=388;RPL=0;RPP=68.1545;RPPR=845.542;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=388;SRP=845.542;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:224:97,14:97:3810:14:549:-15.9479,0,-309.155 0|0:533:153,0:153:5982:0:0:0,-46.0576,-537.861 0|1:221:47,11:47:1843:11:438:-21.9199,0,-148.248 0|0:286:91,0:91:3567:0:0:0,-27.3937,-320.724 1|1:196:0,0:0:0:0:0:0,0,0 1|1:188:0,5:0:0:5:197:-17.7139,-1.50515,0 dDocent_Contig_1505 31 . G C 55.3264 . AB=0.107692;ABP=89.9026;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=554;DPB=554;DPRA=0.78135;EPP=37.7539;EPPR=1171.26;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.981413;PAO=0;PQA=0;PQR=0;PRO=0;QA=622;QR=21110;RO=538;RPL=0;RPP=37.7539;RPPR=1171.26;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=538;SRP=1171.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:65:58,7:58:2242:7:275:-5.55037,0,-182.393 0/0:84:81,3:81:3103:3:123:0,-13.8217,-267.911 0/0:86:86,0:86:3401:0:0:0,-25.8886,-306.15 0/0:94:88,6:88:3479:6:224:0,-7.7842,-292.646 0/0:88:88,0:88:3475:0:0:0,-26.4906,-312.794 0/0:137:137,0:137:5410:0:0:0,-41.2411,-486.752 dDocent_Contig_1506 56 . G A 318.309 . AB=0.175258;ABP=91.8616;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=484;DPB=484;DPRA=1.00621;EPP=42.0968;EPPR=1014.92;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.611111;PAIREDR=0.665236;PAO=0;PQA=0;PQR=0;PRO=0;QA=713;QR=18458;RO=466;RPL=18;RPP=42.0968;RPPR=1014.92;RPR=0;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=466;SRP=1014.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:63:63,0:63:2450:0:0:0,-18.9649,-220.643 0/0:80:80,0:80:3177:0:0:0,-24.0824,-286 0/0:58:58,0:58:2272:0:0:0,-17.4597,-204.651 0/0:121:121,0:121:4810:0:0:0,-36.4246,-432.796 0/0:65:64,1:64:2560:1:35:0,-16.0683,-227.036 0/1:97:80,17:80:3189:17:678:-32.1496,0,-257.869 dDocent_Contig_1507 27 . T A 15534 . AB=0.530964;ABP=11.2134;AC=6;AF=0.5;AN=12;AO=523;CIGAR=1X;DP=985;DPB=985;DPRA=0;EPP=1138.69;EPPR=1006.23;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998088;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=20595;QR=18475;RO=462;RPL=0;RPP=1138.69;RPPR=1006.23;RPR=523;RUN=1;SAF=523;SAP=1138.69;SAR=0;SRF=462;SRP=1006.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:109:39,70:39:1574:70:2756:-215.359,0,-109.082 0/1:158:66,92:66:2646:92:3583:-274.963,0,-190.703 0/1:253:76,177:76:3050:177:6959:-549.87,0,-198.42 0/1:147:64,83:64:2568:83:3304:-253.17,0,-186.997 0/1:157:114,43:114:4507:43:1719:-107.676,0,-358.305 0/1:161:103,58:103:4130:58:2274:-156.363,0,-323.194 dDocent_Contig_1508 51 . C A 161.763 . AB=0.00775194;ABP=274.512;AC=0;AF=0;AN=12;AO=18;CIGAR=2M1X1M;DP=894;DPB=877.5;DPRA=1.40571;EPP=42.0968;EPPR=1829.22;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=700;QR=33032;RO=841;RPL=18;RPP=42.0968;RPPR=1829.22;RPR=0;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=841;SRP=1829.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:129:112,16,1:112:4376:16,1:609,41:-16.194,0,-354.892,-46.5236,-356.324,-405.959 0|0:201:200,1,0:200:7860:1,0:40,0:0,-56.5113,-703.061,-60.206,-703.363,-706.658 0|0:112:105,7,0:105:4153:7,0:273,0:0,-8.7802,-348.825,-31.6081,-350.932,-373.37 0|0:240:212,9,17:212:8344:9,17:351,659:0,-34.9689,-718.628,-9.69483,-667.211,-690.942 0|0:114:114,0,0:114:4474:0,0:0,0:0,-34.3174,-402.644,-34.3174,-402.644,-402.644 0|0:98:98,0,0:98:3825:0,0:0,0:0,-29.5009,-344.281,-29.5009,-344.281,-344.281 dDocent_Contig_1509 31 . C A 927.775 . AB=0.230769;ABP=117.597;AC=5;AF=0.416667;AN=12;AO=46;CIGAR=1X;DP=237;DPB=237;DPRA=0;EPP=102.898;EPPR=417.762;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.869565;PAIREDR=0.942408;PAO=0;PQA=0;PQR=0;PRO=0;QA=1818;QR=7682;RO=191;RPL=0;RPP=102.898;RPPR=417.762;RPR=46;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=191;SRP=417.762;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:12,4:12:488:4:161:-10.059,0,-39.4548 0/1:48:40,8:40:1608:8:313:-14.082,0,-130.503 0/1:31:23,8:23:929:8:321:-19.9256,0,-74.5772 0/1:47:31,16:31:1219:16:627:-42.6141,0,-95.8282 0/0:55:51,4:51:2066:4:163:0,-1.49822,-171.059 0/1:40:34,6:34:1372:6:233:-9.29767,0,-111.693 dDocent_Contig_1510 22 . A G 460.077 . AB=0.167702;ABP=157.428;AC=1;AF=0.0833333;AN=12;AO=56;CIGAR=1X;DP=899;DPB=899;DPRA=1.58102;EPP=37.909;EPPR=1833.56;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.303571;PAIREDR=0.967972;PAO=0;PQA=0;PQR=0;PRO=0;QA=2150;QR=33608;RO=843;RPL=0;RPP=124.613;RPPR=1833.56;RPR=56;RUN=1;SAF=43;SAP=37.909;SAR=13;SRF=843;SRP=1833.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:165:155,10:155:6130:10:407:0,-12.6796,-514.473 0/0:146:137,9:137:5464:9:318:0,-14.993,-462.643 0/0:80:80,0:80:3151:0:0:0,-24.0824,-283.66 0/1:161:134,27:134:5357:27:1050:-46.3265,0,-433.505 0/0:136:136,0:136:5452:0:0:0,-40.9401,-490.502 0/0:211:201,10:201:8054:10:375:0,-29.4253,-690.319 dDocent_Contig_1511 22 . T C 290.888 . AB=0.156522;ABP=120.855;AC=2;AF=0.166667;AN=12;AO=19;CIGAR=1X;DP=296;DPB=296;DPRA=0.986577;EPP=44.2683;EPPR=604.508;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.684211;PAIREDR=0.913357;PAO=0;PQA=0;PQR=0;PRO=0;QA=750;QR=11037;RO=277;RPL=0;RPP=44.2683;RPPR=604.508;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=277;SRP=604.508;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:60:53,7:53:2110:7:267:-6.32417,0,-172.022 0/0:60:60,0:60:2410:0:0:0,-18.0618,-217.048 0/0:32:31,1:31:1241:1:41:0,-5.53839,-107.869 0/1:55:44,11:44:1757:11:442:-23.5783,0,-141.797 0/0:28:28,0:28:1099:0:0:0,-8.42884,-99.1936 0/0:61:61,0:61:2420:0:0:0,-18.3628,-217.964 dDocent_Contig_1512 21 . C A 3304.9 . AB=0.465021;ABP=5.59283;AC=1;AF=0.0833333;AN=12;AO=143;CIGAR=1X;DP=2402;DPB=2402;DPRA=0.784547;EPP=313.531;EPPR=4906.2;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5649;QR=89736;RO=2258;RPL=0;RPP=313.531;RPPR=4906.2;RPR=143;RUN=1;SAF=143;SAP=313.531;SAR=0;SRF=2258;SRP=4906.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:351:351,0:351:13994:0:0:0,-105.662,-1258.41 0/0:655:637,17:637:25231:17:640:0,-139.365,-2210.69 0/0:406:406,0:406:16153:0:0:0,-122.218,-1452.49 0/0:589:589,0:589:23421:0:0:0,-177.307,-2105.88 0/0:158:145,13:145:5717:13:520:0,-0.416557,-467.206 0/1:243:130,113:130:5220:113:4489:-330.804,0,-396.492 dDocent_Contig_1513 72 . C T 144.964 . AB=0.25;ABP=20.3821;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=174;DPB=174;DPRA=1.27551;EPP=33.4109;EPPR=350.446;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.86875;PAO=0;PQA=0;PQR=0;PRO=0;QA=467;QR=5067;RO=160;RPL=14;RPP=33.4109;RPPR=350.446;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=160;SRP=350.446;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:26,2:26:829:2:66:0,-2.16053,-68.6416 0/1:32:24,8:24:730:8:268:-14.8139,0,-56.3581 0/0:18:18,0:18:589:0:0:0,-5.41854,-53.3216 0/0:33:30,3:30:952:3:96:0,-0.976183,-77.0166 0/0:31:31,0:31:979:0:0:0,-9.33193,-88.4055 0/0:32:31,1:31:988:1:37:0,-5.93513,-85.5185 dDocent_Contig_1514 107 . N G 455.493 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=15;CIGAR=1X;DP=15;DPB=15;DPRA=0;EPP=35.5824;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=485;QR=0;RO=0;RPL=0;RPP=35.5824;RPPR=0;RPR=15;RUN=1;SAF=0;SAP=35.5824;SAR=15;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:86:-8.02461,-0.90309,0 1/1:6:0,6:0:0:6:194:-17.7782,-1.80618,0 1/1:5:0,5:0:0:5:170:-15.6342,-1.50515,0 dDocent_Contig_1515 1 . N G 103.777 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=104;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_1516 98 . N C 101.833 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=102;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 dDocent_Contig_1517 52 . A T 208.819 . AB=0.171053;ABP=74.4403;AC=1;AF=0.0833333;AN=12;AO=22;CIGAR=1X;DP=393;DPB=393;DPRA=1;EPP=50.7827;EPPR=755.185;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8541;NS=6;NUMALT=1;ODDS=0;PAIRED=0.636364;PAIREDR=0.735135;PAO=0;PQA=0;PQR=0;PRO=0;QA=802;QR=13181;RO=370;RPL=13;RPP=4.58955;RPPR=3.22158;RPR=9;RUN=1;SAF=13;SAP=4.58955;SAR=9;SRF=188;SRP=3.22158;SRR=182;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:65:65,0:65:2328:0:0:0,-19.5669,-209.704 0/0:68:66,2:66:2425:2:76:0,-13.2565,-211.234 0/1:76:63,13:63:2224:13:486:-21.2006,0,-177.502 0/0:84:79,5:79:2760:5:165:0,-10.121,-233.416 0/0:34:32,2:32:1146:2:75:0,-3.11622,-96.1167 0/0:66:65,0:65:2298:0:0:0,-19.5669,-206.916 dDocent_Contig_1518 178 . T A 38.2184 . AB=0.106383;ABP=66.2602;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=329;DPB=329;DPRA=0.833333;EPP=13.8677;EPPR=706.567;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.888889;PAO=0;PQA=0;PQR=0;PRO=0;QA=199;QR=12789;RO=324;RPL=5;RPP=13.8677;RPPR=706.567;RPR=0;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=706.567;SRR=324;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:49:49,0:49:1936:0:0:0,-14.7505,-174.429 0/0:44:44,0:44:1761:0:0:0,-13.2453,-158.71 0/0:66:66,0:66:2634:0:0:0,-19.868,-237.194 0/0:51:51,0:51:1982:0:0:0,-15.3525,-178.584 0/1:47:42,5:42:1659:5:199:-4.14053,0,-135.388 0/0:72:72,0:72:2817:0:0:0,-21.6742,-253.648 dDocent_Contig_1519 98 . N C 3192.98 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=111;CIGAR=1X;DP=111;DPB=111;DPRA=0;EPP=244.044;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=5.42101e-20;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3522;QR=0;RO=0;RPL=111;RPP=244.044;RPPR=0;RPR=0;RUN=1;SAF=111;SAP=244.044;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:39:0,39:0:0:39:1244:-112.246,-11.7402,0 1/1:25:0,25:0:0:25:834:-75.3693,-7.52575,0 1/1:21:0,21:0:0:21:701:-63.4028,-6.32163,0 1/1:24:0,24:0:0:24:710:-64.1762,-7.22472,0 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 1/1:1:0,1:0:0:1:26:-2.59983,-0.30103,0 dDocent_Contig_1520 16 . A G 340.81 . AB=0.132653;ABP=232.743;AC=3;AF=0.25;AN=12;AO=31;CIGAR=1X;DP=382;DPB=382;DPRA=0.99375;EPP=70.3259;EPPR=765.197;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.806452;PAIREDR=0.703704;PAO=0;PQA=0;PQR=0;PRO=0;QA=1245;QR=14030;RO=351;RPL=0;RPP=70.3259;RPPR=765.197;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=351;SRP=765.197;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:44:37,7:37:1470:7:278:-12.1439,0,-119.305 0/1:82:74,8:74:2943:8:326:-5.02541,0,-240.281 0/0:44:43,1:43:1745:1:41:0,-9.15075,-153.167 0/1:70:59,11:59:2367:11:436:-18.5212,0,-192.113 0/0:78:74,4:74:2969:4:164:0,-8.33044,-252.147 0/0:64:64,0:64:2536:0:0:0,-19.2659,-228.384 dDocent_Contig_1521 52 . G T 1562.35 . AB=0.195876;ABP=314.717;AC=1;AF=0.0833333;AN=12;AO=105;CIGAR=1X;DP=1948;DPB=1948;DPRA=1.17411;EPP=231.015;EPPR=4000.69;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4193;QR=72998;RO=1841;RPL=105;RPP=231.015;RPPR=4000.69;RPR=0;RUN=1;SAF=105;SAP=231.015;SAR=0;SRF=1841;SRP=4000.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:225:225,0:225:8982:0:0:0,-67.7317,-807.849 0/0:334:334,0:334:13303:0:0:0,-100.544,-1196.29 0/0:269:264,4:264:10361:4:163:0,-65.915,-916.802 0/0:337:337,0:337:13379:0:0:0,-101.447,-1203.14 0/1:388:311,76:311:12319:76:3034:-156.554,0,-991.276 0/0:395:370,25:370:14654:25:996:0,-28.9743,-1227.82 dDocent_Contig_1522 18 . T C 57512.2 . AB=0.830023;ABP=2051.16;AC=6;AF=0.5;AN=12;AO=1797;CIGAR=1X;DP=2165;DPB=2165;DPRA=0;EPP=3905.15;EPPR=795.598;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998887;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=71239;QR=13785;RO=365;RPL=0;RPP=3905.15;RPPR=795.598;RPR=1797;RUN=1;SAF=1797;SAP=3905.15;SAR=0;SRF=365;SRP=795.598;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:268:61,207:61:2353:207:8184:-655.446,0,-131.296 0/1:538:95,441:95:3546:441:17558:-1417.21,0,-157.65 0/1:287:52,235:52:1948:235:9358:-755.247,0,-89.1446 0/1:446:66,380:66:2539:380:15066:-1220.56,0,-94.4306 0/1:154:45,109:45:1634:109:4305:-341.051,0,-100.951 0/1:472:46,425:46:1765:425:16768:-1365.71,0,-16.9827 dDocent_Contig_1523 54 . G A 1106.2 . AB=0.135225;ABP=695.304;AC=3;AF=0.25;AN=12;AO=112;CIGAR=1X;DP=1118;DPB=1118;DPRA=0;EPP=246.215;EPPR=2178.83;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997006;PAO=0;PQA=0;PQR=0;PRO=0;QA=4490;QR=39678;RO=1002;RPL=112;RPP=246.215;RPPR=2178.83;RPR=0;RUN=1;SAF=112;SAP=246.215;SAR=0;SRF=1002;SRP=2178.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:138:133,5:133:5236:5:204:0,-22.7981,-452.382 0/1:191:148,42:148:5807:42:1673:-93.2145,0,-464.855 0/0:219:203,16:203:8129:16:642:0,-7.81213,-673.045 0/1:187:168,16:168:6673:16:647:-2.79924,0,-544.529 0/0:162:152,10:152:6012:10:408:0,-11.6863,-503.773 0/1:221:198,23:198:7821:23:916:-16.2153,0,-636.97 dDocent_Contig_1524 1 . N G 151.542 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=4.60517;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=164;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:164:-15.1499,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1525 31 . G A 71.3508 . AB=0.107527;ABP=127.438;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=522;DPB=522;DPRA=1.20253;EPP=39.9253;EPPR=1093.09;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.529412;PAIREDR=0.653386;PAO=0;PQA=0;PQR=0;PRO=0;QA=676;QR=19853;RO=502;RPL=0;RPP=39.9253;RPPR=1093.09;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=502;SRP=1093.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:84:84,0:84:3322:0:0:0,-25.2865,-299.028 0/0:94:90,4:90:3566:4:164:0,-13.1469,-305.803 0/0:73:73,0:73:2880:0:0:0,-21.9752,-259.308 0/0:98:92,3:92:3618:3:122:0,-17.6282,-314.273 0/0:80:80,0:80:3166:0:0:0,-24.0824,-285.023 0/1:93:83,10:83:3301:10:390:-7.45384,0,-269.141 dDocent_Contig_1526 69 . C A 90302.7 . AB=0.12491;ABP=5100.13;AC=2;AF=0.166667;AN=12;AO=521;CIGAR=7M1X1M;DP=4171;DPB=3187.67;DPRA=0;EPP=1134.35;EPPR=1505.67;GTI=0;LEN=1;MEANALT=5.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=4.44089e-16;PAIRED=0.998081;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=19353;QR=26271;RO=692;RPL=521;RPP=1134.35;RPPR=1505.67;RPR=0;RUN=1;SAF=521;SAP=1134.35;SAR=0;SRF=692;SRP=1505.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:709:111,462,131:111:4208:462,131:16608,4754:-1364.31,-43.1114,-249.058,-1009.59,0,-1315.17 0|0:917:175,661,78:175:6589:661,78:24079,2935:-1913.87,0,-340.896,-1726.08,-299.405,-2242.47 0|0:498:96,370,26:96:3679:370,26:14017,989:-1120.17,0,-190.563,-1067.96,-220.832,-1362.06 0|0:764:204,489,69:204:7749:489,69:17801,2580:-1392.37,0,-488.234,-1242.52,-424.185,-1857.19 0|1:714:0,565,147:0:0:565,147:20565,5466:-2126.92,-447.475,-277.393,-1679.57,0,-1635.32 0|0:569:106,390,70:106:4046:390,70:14076,2629:-1116.63,0,-214.535,-933.167,-116.572,-1244.03 dDocent_Contig_1527 19 . T C 12854.2 . AB=0.322798;ABP=408.579;AC=6;AF=0.5;AN=12;AO=480;CIGAR=1X;DP=1487;DPB=1487;DPRA=0;EPP=1045.32;EPPR=2189.68;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.9875;PAIREDR=0.998014;PAO=0;PQA=0;PQR=0;PRO=0;QA=19297;QR=40381;RO=1007;RPL=0;RPP=1045.32;RPPR=2189.68;RPR=480;RUN=1;SAF=480;SAP=1045.32;SAR=0;SRF=1007;SRP=2189.68;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:281:159,122:159:6369:122:4893:-355.659,0,-488.351 0/1:453:353,100:353:14195:100:3998:-223.427,0,-1140.06 0/1:261:160,101:160:6403:101:4097:-290.106,0,-497.424 0/1:309:198,111:198:7914:111:4446:-307.047,0,-618.783 0/1:86:51,35:51:2028:35:1418:-101.977,0,-156.816 0/1:97:86,11:86:3472:11:445:-11.2053,0,-283.308 dDocent_Contig_1528 107 . N G 1794.45 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=58;CIGAR=1X;DP=59;DPB=59;DPRA=0;EPP=128.956;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1966;QR=0;RO=0;RPL=0;RPP=128.956;RPPR=0;RPR=58;RUN=1;SAF=0;SAP=128.956;SAR=58;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:16:0,16:0:0:16:557:-50.4572,-4.81648,0 1/1:16:0,16:0:0:16:553:-50.0952,-4.81648,0 1/1:3:0,2:0:0:2:56:-5.08502,-0.60206,0 1/1:14:0,14:0:0:14:474:-42.9818,-4.21442,0 1/1:6:0,6:0:0:6:200:-18.3268,-1.80618,0 1/1:4:0,4:0:0:4:126:-11.6502,-1.20412,0 dDocent_Contig_1529 22 . G A 74.3294 . AB=0.139535;ABP=51.5402;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=274;DPB=274;DPRA=1.0916;EPP=26.8965;EPPR=574.108;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.454545;PAIREDR=0.657795;PAO=0;PQA=0;PQR=0;PRO=0;QA=431;QR=10524;RO=263;RPL=0;RPP=26.8965;RPPR=574.108;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=263;SRP=574.108;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:33,1:33:1330:1:41:0,-6.14045,-115.866 0/1:43:37,6:37:1466:6:226:-7.7517,0,-119.248 0/0:49:49,0:49:1938:0:0:0,-14.7505,-174.615 0/0:66:62,4:62:2484:4:164:0,-4.71808,-208.552 0/0:36:36,0:36:1452:0:0:0,-10.8371,-130.925 0/0:46:46,0:46:1854:0:0:0,-13.8474,-167.065 dDocent_Contig_1530 10 . C A 28435.6 . AB=0.862715;ABP=735.501;AC=8;AF=0.666667;AN=12;AO=849;CIGAR=1X;DP=937;DPB=937;DPRA=0;EPP=1846.59;EPPR=189.757;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998822;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=33780;QR=3479;RO=86;RPL=0;RPP=1846.59;RPPR=189.757;RPR=849;RUN=1;SAF=849;SAP=1846.59;SAR=0;SRF=86;SRP=189.757;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:65:11,54:11:443:54:2153:-174.384,0,-20.6584 0/1:182:27,154:27:1092:154:6137:-497.202,0,-43.6703 0/1:176:19,156:19:770:156:6169:-501.896,0,-16.531 0/1:218:29,189:29:1174:189:7524:-611.162,0,-40.3118 1/1:144:0,144:0:0:144:5742:-516.59,-43.3483,0 1/1:152:0,152:0:0:152:6055:-544.735,-45.7566,0 dDocent_Contig_1531 15 . T C 22478.7 . AB=0.0257937;ABP=987.428;AC=6;AF=0.5;AN=12;AO=13;CIGAR=2X2M2X1M1X2M1D1M1X1M1X1M2X3M1X1M1X;DP=1311;DPB=1578.79;DPRA=0;EPP=31.2394;EPPR=713.082;GTI=0;LEN=1;MEANALT=10.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.996942;PAO=0;PQA=0;PQR=0;PRO=0;QA=497;QR=12653;RO=327;RPL=0;RPP=31.2394;RPPR=713.082;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=327;SRP=713.082;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:207:22,175,0,7:22:859:175,0,7:5686,0,270:-432.423,0,-17.9644,-439.046,-70.6446,-509.671,-416.87,-48.4696,-487.496,-485.389 0|1:259:65,180,0,4:65:2509:180,0,4:5529,0,157:-398.59,0,-152.044,-418.157,-206.23,-624.228,-405.243,-193.316,-611.316,-610.111 0|1:105:34,67,0,2:34:1327:67,0,2:2048,0,78:-149.377,0,-89.0016,-159.612,-109.171,-268.728,-153.198,-102.758,-262.315,-261.713 0|1:236:34,164,0,23:34:1304:164,0,23:5650,0,878:-439.473,0,-57.6762,-449.708,-107.045,-556.743,-377.679,-35.013,-484.715,-477.791 0|1:185:68,102,10,0:68:2640:102,10,0:3471,383,0:-254.673,0,-186.278,-243.706,-185.551,-457.641,-275.143,-216.983,-460.651,-492.084 0|1:319:104,199,3,0:104:4014:199,3,0:7489,114,0:-577.334,0,-269.866,-599.292,-320.422,-928.035,-608.641,-329.771,-928.938,-938.287 dDocent_Contig_1532 17 . T C 891.903 . AB=0.12693;ABP=707.808;AC=2;AF=0.166667;AN=12;AO=148;CIGAR=1X;DP=1808;DPB=1808;DPRA=0;EPP=324.388;EPPR=3596.8;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=59.9776;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995166;PAO=0;PQA=0;PQR=0;PRO=0;QA=5857;QR=65361;RO=1655;RPL=0;RPP=324.388;RPPR=3596.8;RPR=148;RUN=1;SAF=148;SAP=324.388;SAR=0;SRF=1655;SRP=3596.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:274:261,13:261:10391:13:508:0,-36.4245,-888.469 0/0:346:321,25:321:12619:25:993:0,-14.4887,-1045.17 0/0:242:225,17:225:8881:17:675:0,-11.7689,-737.632 0/0:363:344,19:344:13564:19:749:0,-41.5421,-1152.04 0/1:307:258,49:258:10250:49:1935:-81.9415,0,-829.43 0/1:276:246,25:246:9656:25:997:-8.06238,0,-786.517 dDocent_Contig_1533 17 . G A 2565.91 . AB=0.434555;ABP=10.1159;AC=2;AF=0.166667;AN=12;AO=83;CIGAR=1X2M1X;DP=543;DPB=543;DPRA=0.388211;EPP=183.243;EPPR=949.772;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=59.8693;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.981651;PAO=0;PQA=0;PQR=0;PRO=0;QA=3268;QR=17184;RO=436;RPL=0;RPP=183.243;RPPR=949.772;RPR=83;RUN=1;SAF=83;SAP=183.243;SAR=0;SRF=436;SRP=949.772;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:50:33,10,7:33:1306:10,7:381,274:-21.3136,0,-104.396,-8.71362,-84.8769,-114.02 0|1:68:22,0,46:22:876:0,46:0,1812:-142.843,-149.465,-221.6,0,-72.5309,-58.6835 0|0:24:19,5,0:19:740:5,0:189,0:-10.1496,0,-59.6722,-15.8692,-61.1774,-76.6666 0|1:73:43,0,30:43:1663:0,30:0,1182:-84.6899,-97.6342,-234.162,0,-136.918,-127.887 0|0:145:145,0,0:145:5719:0,0:0,0:0,-43.6493,-514.564,-43.6493,-514.564,-514.564 0|0:183:174,0,0:174:6880:0,0:0,0:0,-52.3792,-618.536,-52.3792,-618.536,-618.536 dDocent_Contig_1534 33 . C G 446.373 . AB=0.122159;ABP=439.501;AC=3;AF=0.25;AN=12;AO=52;CIGAR=1X;DP=736;DPB=736;DPRA=0.878277;EPP=115.927;EPPR=1486.13;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.903846;PAIREDR=0.98243;PAO=0;PQA=0;PQR=0;PRO=0;QA=2036;QR=27250;RO=683;RPL=0;RPP=115.927;RPPR=1486.13;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=683;SRP=1486.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:97:80,17:80:3168:17:650:-29.6184,0,-256.001 0/1:134:122,12:122:4885:12:472:-2.49089,0,-399.204 0/1:121:107,14:107:4270:14:558:-14.1361,0,-347.833 0/0:117:108,9:108:4306:9:356:0,-2.82048,-355.099 0/0:127:127,0:127:5082:0:0:0,-38.2308,-457.245 0/0:140:139,0:139:5539:0:0:0,-41.8432,-497.949 dDocent_Contig_1535 49 . G C 372.872 . AB=0.173913;ABP=109.224;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=1769;DPB=1769;DPRA=0.139057;EPP=46.4397;EPPR=3790.06;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.985698;PAO=0;PQA=0;PQR=0;PRO=0;QA=800;QR=68991;RO=1748;RPL=0;RPP=46.4397;RPPR=3790.06;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=1748;SRP=3798.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:234:234,0:234:9190:0:0:0,-70.441,-826.594 0/0:589:588,0:588:23240:0:0:0,-177.006,-2089.26 0/0:337:337,0:337:13335:0:0:0,-101.447,-1199.19 0/0:494:494,0:494:19454:0:0:0,-148.709,-1749.32 0/1:53:44,9:44:1732:9:360:-16.8092,0,-140.156 0/1:62:51,11:51:2040:11:440:-21.2916,0,-165.12 dDocent_Contig_1536 16 . A T 2111.43 . AB=0.408602;ABP=16.5061;AC=3;AF=0.25;AN=12;AO=85;CIGAR=1X3M1I4M1X1M1X4M;DP=376;DPB=380.067;DPRA=0;EPP=187.585;EPPR=584.965;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.988235;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3296;QR=10535;RO=268;RPL=0;RPP=187.585;RPPR=584.965;RPR=85;RUN=1;SAF=85;SAP=187.585;SAR=0;SRF=268;SRP=584.965;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:50:45,2,0,0:45:1787:2,0,0:72,0,0:0,-7.67821,-154.216,-13.5463,-154.818,-160.69,-13.5463,-154.818,-160.69,-160.69 0|0:63:56,5,0,0:56:2204:5,0,0:197,0,0:0,-0.662958,-180.446,-16.8577,-181.952,-198.158,-16.8577,-181.952,-198.158,-198.158 0|0:77:69,2,1,5:69:2706:2,1,5:78,40,197:0,-14.3612,-236.283,-17.4751,-233.59,-239.7,-4.56536,-220.68,-223.796,-225.586 0|1:56:35,13,4,3:35:1361:13,4,3:510,162,117:-31.402,0,-107.916,-28.5775,-98.47,-139.208,-32.3222,-102.213,-130.796,-143.252 0|1:49:21,25,2,0:21:837:25,2,0:950,81,0:-71.5628,0,-61.3989,-71.2036,-62.2449,-139.538,-77.8845,-68.9246,-140.14,-146.82 0|1:81:42,38,0,0:42:1640:38,0,0:1489,0,0:-109.785,0,-123.367,-122.428,-134.806,-257.243,-122.428,-134.806,-257.243,-257.243 dDocent_Contig_1537 15 . A G 132.363 . AB=0.117188;ABP=165.939;AC=4;AF=0.333333;AN=12;AO=17;CIGAR=1X;DP=186;DPB=186;DPRA=1.23077;EPP=39.9253;EPPR=369.989;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.588235;PAIREDR=0.532544;PAO=0;PQA=0;PQR=0;PRO=0;QA=666;QR=6776;RO=169;RPL=0;RPP=39.9253;RPPR=369.989;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=169;SRP=369.989;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:25,5:25:991:5:183:-7.78508,0,-80.4571 0/1:33:30,3:30:1213:3:122:-1.4385,0,-99.5063 0/0:26:26,0:26:1045:0:0:0,-7.82678,-94.3397 0/0:32:30,2:30:1220:2:81:0,-1.94723,-102.383 0/1:28:25,3:25:1003:3:116:-2.38818,0,-82.1343 0/1:37:33,4:33:1304:4:164:-4.01179,0,-106.487 dDocent_Contig_1538 16 . A G 19262.4 . AB=0.505864;ABP=3.3923;AC=6;AF=0.5;AN=12;AO=647;CIGAR=1X;DP=1279;DPB=1279;DPRA=0;EPP=1407.95;EPPR=1373.21;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.949;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0015456;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=25727;QR=24921;RO=631;RPL=0;RPP=1407.95;RPPR=1373.21;RPR=647;RUN=1;SAF=647;SAP=1407.95;SAR=0;SRF=631;SRP=1373.21;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:138:112,25:112:4395:25:938:-43.3254,0,-354.138 0/1:166:117,49:117:4664:49:1920:-123.018,0,-369.714 0/1:112:94,18:94:3704:18:724:-31.7596,0,-299.685 0/1:196:146,50:146:5777:50:1998:-120.994,0,-460.748 0/1:345:69,276:69:2730:276:11050:-889.869,0,-141.962 0/1:322:93,229:93:3651:229:9097:-721.267,0,-231.693 dDocent_Contig_1539 57 . G A 44.6529 . AB=0.0987654;ABP=116.275;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=401;DPB=401;DPRA=0.882629;EPP=24.725;EPPR=852.056;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.503836;PAO=0;PQA=0;PQR=0;PRO=0;QA=399;QR=15364;RO=391;RPL=10;RPP=24.725;RPPR=852.056;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=391;SRP=852.056;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:57:56,1:56:2214:1:41:0,-13.0641,-195.344 0/0:100:100,0:100:3972:0:0:0,-30.103,-357.486 0/0:47:47,0:47:1842:0:0:0,-14.1484,-166.001 0/1:81:73,8:73:2830:8:320:-4.78404,0,-230.443 0/0:66:66,0:66:2610:0:0:0,-19.868,-235.042 0/0:50:49,1:49:1896:1:38:0,-11.2542,-167.05 dDocent_Contig_1540 46 . A G 54845.8 . AB=0.799864;ABP=1154.24;AC=7;AF=0.583333;AN=12;AO=1723;CIGAR=1X;DP=2035;DPB=2035;DPRA=0;EPP=3735.78;EPPR=678.338;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=66631;QR=12057;RO=311;RPL=1;RPP=3735.78;RPPR=678.338;RPR=1722;RUN=1;SAF=1723;SAP=3744.46;SAR=0;SRF=311;SRP=678.338;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:186:34,152:34:1320:152:5892:-474.148,0,-63.0742 0/1:221:62,159:62:2406:159:6136:-485.538,0,-150.167 0/1:257:92,165:92:3547:165:6390:-497.549,0,-241.937 0/1:220:48,172:48:1839:172:6649:-531.968,0,-99.5074 0/1:590:58,531:58:2264:531:20435:-1660.14,0,-26.3873 1/1:561:17,544:17:681:544:21129:-1838.43,-107.259,0 dDocent_Contig_1541 36 . T A 32613.7 . AB=0.0926431;ABP=1589.92;AC=0;AF=0;AN=12;AO=107;CIGAR=1X3M1X;DP=1413;DPB=1413;DPRA=0;EPP=235.358;EPPR=641.423;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.934579;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4265;QR=11707;RO=294;RPL=0;RPP=235.358;RPPR=641.423;RPR=107;RUN=1;SAF=107;SAP=235.358;SAR=0;SRF=294;SRP=641.423;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:159:48,21,90:48:1909:21,90:824,3597:-281.798,-228.487,-379.336,0,-89.4149,-130.082 0|0:172:46,26,98:46:1836:26,98:1035,3977:-314.146,-242.776,-386.156,0,-65.9907,-121.709 0|0:255:79,33,143:79:3145:33,143:1328,5757:-450.68,-365.013,-614.029,0,-149.498,-215.901 0|0:210:38,15,156:38:1521:15,156:604,6275:-505.663,-467.32,-588.105,0,-75.5176,-78.3391 0|0:312:24,5,283:24:921:5,283:202,11358:-938.187,-928.758,-1002.84,-9.6238,-68.5346,0 0|0:305:59,7,238:59:2375:7,238:272,9606:-774.095,-769.506,-963.138,0,-173.4,-124.104 dDocent_Contig_1542 1 . N G 111.959 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.91202;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=120;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:120:-11.1873,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1543 28 . T C 262.454 . AB=0.23913;ABP=30.2009;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=172;DPB=172;DPRA=0.730159;EPP=26.8965;EPPR=352.617;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.818182;PAIREDR=0.84472;PAO=0;PQA=0;PQR=0;PRO=0;QA=446;QR=5900;RO=161;RPL=0;RPP=26.8965;RPPR=352.617;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=161;SRP=352.617;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1291:0:0:0,-10.536,-116.485 0/0:27:27,0:27:958:0:0:0,-8.12781,-86.5233 0/0:23:23,0:23:846:0:0:0,-6.92369,-76.4577 0/0:41:41,0:41:1524:0:0:0,-12.3422,-137.436 0/1:18:16,2:16:583:2:82:-2.36114,0,-47.3781 0/1:28:19,9:19:698:9:364:-24.6959,0,-54.7185 dDocent_Contig_1544 19 . A T 6778.53 . AB=0.193717;ABP=1403.68;AC=2;AF=0.166667;AN=12;AO=336;CIGAR=1X;DP=3947;DPB=3947;DPRA=1.54645;EPP=732.625;EPPR=7809.45;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999444;PAO=0;PQA=0;PQR=0;PRO=0;QA=13416;QR=142775;RO=3595;RPL=0;RPP=732.625;RPPR=7809.45;RPR=336;RUN=1;SAF=336;SAP=732.625;SAR=0;SRF=3595;SRP=7809.45;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:532:532,0:532:21189:0:0:0,-160.148,-1905.21 0/0:678:667,3:667:26426:3:122:0,-190.719,-2364.69 0/0:342:338,0:338:13513:0:0:0,-101.748,-1214.79 0/0:676:674,0:674:26686:0:0:0,-202.894,-2399.15 0/1:761:669,91:669:26531:91:3638:-98.5553,0,-2156.58 0/1:958:715,242:715:28430:242:9656:-580.112,0,-2267.83 dDocent_Contig_1545 19 . G T 321.773 . AB=0.132275;ABP=224.995;AC=2;AF=0.166667;AN=12;AO=31;CIGAR=1X;DP=549;DPB=549;DPRA=0.832524;EPP=70.3259;EPPR=1127.83;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990347;PAO=0;PQA=0;PQR=0;PRO=0;QA=1218;QR=19255;RO=518;RPL=0;RPP=70.3259;RPPR=1127.83;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=518;SRP=1127.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:67:65,2:65:2368:2:77:0,-12.8602,-206.037 0/0:87:83,4:83:3083:4:150:0,-12.3299,-263.779 0/1:67:55,12:55:2073:12:482:-23.5622,0,-166.643 0/1:122:109,13:109:4103:13:509:-9.42878,0,-332.646 0/0:105:105,0:105:3885:0:0:0,-31.6081,-349.78 0/0:101:101,0:101:3743:0:0:0,-30.404,-337.009 dDocent_Contig_1546 66 . A G 75.131 . AB=0.12;ABP=97.0785;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=511;DPB=511;DPRA=0.860092;EPP=22.5536;EPPR=1090.92;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.666667;PAIREDR=0.580838;PAO=0;PQA=0;PQR=0;PRO=0;QA=334;QR=18821;RO=501;RPL=6;RPP=5.18177;RPPR=121.011;RPR=3;RUN=1;SAF=6;SAP=5.18177;SAR=3;SRF=333;SRP=121.011;SRR=168;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:82:82,0:82:3067:0:0:0,-24.6845,-276.177 0/0:97:97,0:97:3599:0:0:0,-29.1999,-324.018 0/0:48:48,0:48:1761:0:0:0,-14.4494,-158.735 0/0:122:122,0:122:4640:0:0:0,-36.7257,-417.603 0/1:75:66,9:66:2463:9:334:-7.83185,0,-199.289 0/0:87:86,0:86:3291:0:0:0,-25.8886,-296.222 dDocent_Contig_1547 58 . T G 46.3465 . AB=0.0944882;ABP=184.405;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=842;DPB=842;DPRA=0.888112;EPP=29.068;EPPR=1805.33;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.987952;PAO=0;PQA=0;PQR=0;PRO=0;QA=476;QR=32943;RO=830;RPL=12;RPP=29.068;RPPR=1805.33;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=830;SRP=1805.33;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:136:136,0:136:5322:0:0:0,-40.9401,-478.856 0/0:95:95,0:95:3789:0:0:0,-28.5978,-341.021 0/1:127:115,12:115:4556:12:476:-4.9534,0,-371.74 0/0:97:97,0:97:3854:0:0:0,-29.1999,-346.87 0/0:154:154,0:154:6103:0:0:0,-46.3586,-549.038 0/0:233:233,0:233:9319:0:0:0,-70.14,-838.135 dDocent_Contig_1548 92 . A G 42591 . AB=0.485885;ABP=9.07891;AC=6;AF=0.5;AN=12;AO=1704;CIGAR=1X;DP=3507;DPB=3507;DPRA=0;EPP=3703.2;EPPR=3916;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997653;PAIREDR=0.99889;PAO=0;PQA=0;PQR=0;PRO=0;QA=59096;QR=62525;RO=1802;RPL=1704;RPP=3703.2;RPPR=3916;RPR=0;RUN=1;SAF=1704;SAP=3703.2;SAR=0;SRF=1802;SRP=3916;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:433:142,291:142:4844:291:9975:-767.42,0,-305.798 0/1:590:297,293:297:10154:293:10041:-726.094,0,-736.267 0/1:299:189,110:189:6634:110:3848:-256.511,0,-507.143 0/1:641:265,376:265:9225:376:13058:-982.12,0,-637.294 0/1:691:388,302:388:13546:302:10555:-742.114,0,-1011.2 0/1:853:521,332:521:18122:332:11619:-788.835,0,-1373.86 dDocent_Contig_1549 1 . N G 3143.09 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=98;CIGAR=1X;DP=98;DPB=98;DPRA=0;EPP=198.797;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0204082;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3461;QR=0;RO=0;RPL=0;RPP=215.815;RPPR=0;RPR=98;RUN=1;SAF=2;SAP=198.797;SAR=96;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:19:0,19:0:0:19:625:-56.5544,-5.71957,0 1/1:30:0,30:0:0:30:1055:-95.259,-9.0309,0 1/1:11:0,11:0:0:11:388:-35.2558,-3.31133,0 1/1:13:0,13:0:0:13:464:-42.0951,-3.91339,0 1/1:3:0,3:0:0:3:111:-10.3539,-0.90309,0 1/1:22:0,22:0:0:22:818:-73.9442,-6.62266,0 dDocent_Contig_1550 29 . T C 255.354 . AB=0.100897;ABP=620.059;AC=2;AF=0.166667;AN=12;AO=73;CIGAR=1X;DP=1398;DPB=1398;DPRA=0;EPP=161.528;EPPR=2880.21;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2855;QR=51988;RO=1325;RPL=0;RPP=161.528;RPPR=2880.21;RPR=73;RUN=1;SAF=73;SAP=161.528;SAR=0;SRF=1325;SRP=2880.21;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:193:182,11:182:7135:11:424:0,-19.5901,-603.379 0/1:255:226,29:226:8804:29:1132:-25.4062,0,-715.203 0/1:191:175,16:175:6872:16:645:-0.887926,0,-560.76 0/0:273:261,12:261:10195:12:470:0,-39.5294,-874.357 0/0:258:255,3:255:10073:3:119:0,-66.5706,-894.928 0/0:228:226,2:226:8909:2:65:0,-62.4633,-795.198 dDocent_Contig_1551 74 . T C 35.4414 . AB=0.0967742;ABP=134.349;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=813;DPB=813;DPRA=0.645833;EPP=22.5536;EPPR=1748.87;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.914179;PAO=0;PQA=0;PQR=0;PRO=0;QA=350;QR=30492;RO=804;RPL=9;RPP=22.5536;RPPR=1748.87;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=804;SRP=1748.87;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:101:101,0:101:3839:0:0:0,-30.404,-345.583 0/0:157:157,0:157:5941:0:0:0,-47.2617,-534.622 0/1:93:84,9:84:3227:9:350:-3.86277,0,-262.549 0/0:121:121,0:121:4554:0:0:0,-36.4246,-409.9 0/0:131:131,0:131:4977:0:0:0,-39.4349,-447.913 0/0:210:210,0:210:7954:0:0:0,-63.2163,-715.625 dDocent_Contig_1552 9 . C T 5591.77 . AB=0.413866;ABP=33.6846;AC=6;AF=0.5;AN=12;AO=197;CIGAR=1X2M;DP=476;DPB=494.667;DPRA=0;EPP=430.79;EPPR=426.447;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=5.55112e-17;PAIRED=0.969543;PAIREDR=0.892308;PAO=0;PQA=0;PQR=0;PRO=0;QA=7575;QR=7657;RO=195;RPL=0;RPP=430.79;RPPR=426.447;RPR=197;RUN=1;SAF=197;SAP=430.79;SAR=0;SRF=195;SRP=426.447;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:41:15,0,0,1,0,25:15:589:0,0,1,0,25:0,0,40,0,950:-73.3702,-77.8856,-126.333,-77.8856,-126.333,-126.333,-74.5898,-123.037,-123.037,-122.736,-77.8856,-126.333,-126.333,-123.037,-126.333,0,-48.4358,-48.4358,-45.1403,-48.4358,-40.9101 0|1:66:31,0,0,12,0,23:31:1228:0,0,12,0,23:0,0,473,0,888:-63.5928,-72.9247,-174.004,-72.9247,-174.004,-174.004,-34.0067,-135.088,-135.088,-131.476,-72.9247,-174.004,-174.004,-135.088,-174.004,0,-101.077,-101.077,-62.1627,-101.077,-94.1537 0|1:91:20,0,0,20,0,51:20:789:0,0,20,0,51:0,0,785,0,1981:-156.761,-162.781,-227.703,-162.781,-227.703,-227.703,-98.2185,-163.14,-163.14,-157.12,-162.781,-227.703,-227.703,-163.14,-227.703,0,-64.9211,-64.9211,-0.360295,-64.9211,-49.5685 0|1:89:38,0,0,4,0,47:38:1485:0,0,4,0,47:0,0,156,0,1801:-136.366,-147.805,-269.888,-147.805,-269.888,-269.888,-134.982,-257.065,-257.065,-255.861,-147.805,-269.888,-269.888,-257.065,-269.888,0,-122.081,-122.081,-109.258,-122.081,-107.932 0|1:68:35,4,4,7,0,18:35:1382:4,4,7,0,18:156,156,272,0,684:-45.5517,-43.2638,-155.787,-43.2639,-144.168,-155.787,-33.7355,-134.64,-134.64,-145.356,-56.0878,-156.991,-156.991,-147.463,-169.814,0,-100.902,-100.902,-91.3743,-113.725,-108.306 0|1:121:56,4,0,4,24,33:56:2184:4,0,4,24,33:154,0,157,937,1271:-87.5022,-91.7154,-270.028,-104.36,-271.232,-283.876,-91.447,-258.319,-270.964,-269.76,-27.3293,-194.203,-206.847,-193.934,-199.622,0,-166.871,-179.515,-166.603,-102.486,-169.581 dDocent_Contig_1553 68 . T C 111.089 . AB=0.145455;ABP=63.0614;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=301;DPB=301;DPRA=1.005;EPP=29.068;EPPR=630.566;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.416667;PAIREDR=0.422145;PAO=0;PQA=0;PQR=0;PRO=0;QA=470;QR=11531;RO=289;RPL=12;RPP=29.068;RPPR=630.566;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=289;SRP=630.566;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:46:45,1:45:1801:1:41:0,-9.75281,-158.208 0/1:55:47,8:47:1891:8:307:-11.4277,0,-153.836 0/0:32:31,1:31:1205:1:40:0,-5.63728,-104.719 0/0:68:66,2:66:2656:2:82:0,-12.6904,-231.377 0/0:60:60,0:60:2391:0:0:0,-18.0618,-215.341 0/0:40:40,0:40:1587:0:0:0,-12.0412,-143.068 dDocent_Contig_1554 47 . C A 5376.77 . AB=0.184818;ABP=1310.23;AC=3;AF=0.25;AN=12;AO=332;CIGAR=1X;DP=2850;DPB=2850;DPRA=0;EPP=723.939;EPPR=5453.41;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.999602;PAO=0;PQA=0;PQR=0;PRO=0;QA=13066;QR=99917;RO=2514;RPL=0;RPP=723.939;RPPR=5453.41;RPR=332;RUN=1;SAF=332;SAP=723.939;SAR=0;SRF=2514;SRP=5462.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:355:346,7:346:13658:7:281:0,-81.0024,-1202.56 0/0:476:465,11:465:18517:11:417:0,-105.423,-1627.16 0/1:445:401,44:401:15978:44:1762:-24.8397,0,-1302.79 0/0:504:469,34:469:18592:34:1312:0,-33.4515,-1553.44 0/1:466:328,138:328:13106:138:5432:-348.456,0,-1038.29 0/1:604:505,98:505:20066:98:3862:-165.99,0,-1622.66 dDocent_Contig_1555 1 . N G 114.734 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.91202;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:123:-11.4648,-0.90309,0 dDocent_Contig_1556 13 . T A 3178.47 . AB=0.457364;ABP=9.12072;AC=6;AF=0.5;AN=12;AO=177;CIGAR=1X1M1X;DP=387;DPB=387;DPRA=0;EPP=387.361;EPPR=439.476;GTI=0;LEN=1;MEANALT=1.66667;MQM=29.7006;MQMR=56.8507;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6946;QR=7724;RO=201;RPL=0;RPP=387.361;RPPR=439.476;RPR=177;RUN=1;SAF=177;SAP=387.361;SAR=0;SRF=201;SRP=439.476;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:61:30,31:30:1136:31:1222:-66.0291,0,-84.1144 0|1:58:34,23:34:1315:23:912:-41.7708,0,-100.853 0|1:69:36,33:36:1372:33:1281:-62.5386,0,-102.786 0|1:65:24,38:24:915:38:1496:-61.4421,0,-63.3464 0|1:38:16,21:16:621:21:826:-41.743,0,-41.1199 0|1:96:61,31:61:2365:31:1209:-48.321,0,-184.645 dDocent_Contig_1557 13 . C T 106685 . AB=0.0252966;ABP=8746.3;AC=0;AF=0;AN=12;AO=113;CIGAR=1M2I1M1X3M2X1M;DP=5697;DPB=6687.44;DPRA=0;EPP=248.387;EPPR=376.504;GTI=0;LEN=1;MEANALT=20.8;MQM=60;MQMR=60;NS=6;NUMALT=8;ODDS=1.77636e-15;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4361;QR=6704;RO=172;RPL=0;RPP=248.387;RPPR=376.504;RPR=113;RUN=1;SAF=113;SAP=248.387;SAR=0;SRF=172;SRP=376.504;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:829:34,4,5,350,180,63,0,37,75:34:1338:4,5,350,180,63,0,37,75:150,180,13353,6994,2302,0,1472,2976:-1549.79,-1547.74,-1656.6,-1545.34,-1643.12,-1653.9,-464.613,-562.395,-559.998,-469.32,-985.342,-1083.12,-1080.73,0,-1041.22,-1374.81,-1472.6,-1470.2,-389.475,-910.202,-1465.92,-1560.02,-1657.8,-1655.41,-574.681,-1095.41,-1484.88,-1670.09,-1438.83,-1536.61,-1534.21,-453.488,-974.217,-1363.69,-1548.9,-1537.76,-1315.05,-1412.84,-1410.44,-329.713,-850.442,-1239.91,-1425.12,-1303.93,-1402.54 0|0:1230:73,12,0,382,383,83,0,60,101:73:2840:12,0,382,383,83,0,60,101:466,0,14646,14829,2764,0,2392,4057:-2164.57,-2148.25,-2378.03,-2186.54,-2381.64,-2419.93,-984.72,-1179.82,-1218.11,-1103.12,-968.43,-1163.53,-1201.82,0,-1086.53,-1969.57,-2164.67,-2202.96,-1001.14,-984.852,-2177.97,-2186.54,-2381.64,-2419.93,-1218.11,-1201.82,-2202.96,-2419.93,-1989.58,-2184.68,-2222.97,-1021.15,-1004.86,-2005.99,-2222.97,-2204.91,-1852.25,-2047.35,-2085.64,-883.82,-867.53,-1868.67,-2085.64,-1888.68,-2055.24 0|0:743:26,47,2,263,214,41,0,30,65:26:1015:47,2,263,214,41,0,30,65:1804,79,10003,8276,1394,0,1201,2631:-1408.73,-1268.48,-1337.77,-1410.06,-1345.42,-1492.9,-596.218,-531.577,-673.156,-600.486,-736.905,-672.264,-813.843,0,-755.923,-1305.98,-1241.34,-1382.92,-569.077,-709.764,-1377.08,-1416.56,-1351.92,-1493.5,-679.657,-820.344,-1389.42,-1500,-1317.63,-1252.99,-1394.57,-580.723,-721.41,-1290.49,-1401.07,-1392.04,-1199.63,-1134.99,-1276.57,-462.723,-603.41,-1172.49,-1283.07,-1184.13,-1263.5 0|0:1093:38,16,3,398,262,48,0,80,100:38:1471:16,3,398,262,48,0,80,100:604,112,15094,10092,1565,0,3199,4026:-1933.72,-1895.66,-2011.68,-1935.99,-2007.32,-2055.92,-707.636,-778.968,-819.296,-708.655,-1116.7,-1188.03,-1228.36,0,-1158.66,-1823.18,-1894.51,-1934.84,-706.485,-1115.54,-1929.56,-1945.16,-2016.49,-2056.82,-828.465,-1237.53,-1944.01,-2065.99,-1681.67,-1753,-1793.33,-564.971,-974.032,-1680.51,-1802.5,-1778.41,-1613.36,-1684.69,-1725.02,-496.659,-905.72,-1612.2,-1734.19,-1470.69,-1704.08 0|0:920:0,12,57,448,143,45,25,49,89:0:0:12,57,448,143,45,25,49,89:468,2220,16995,5551,1146,935,1927,3598:-1849.55,-1811.07,-1807.46,-1667.09,-1628.62,-1649.93,-456.099,-417.628,-273.64,-321.238,-1393.45,-1354.98,-1210.99,0,-1350.4,-1768.29,-1729.82,-1585.83,-374.852,-1312.2,-1754.74,-1772.98,-1734.51,-1590.53,-379.538,-1316.89,-1691.73,-1765.46,-1691.06,-1652.59,-1508.6,-297.61,-1234.96,-1609.8,-1614.5,-1676.31,-1552.91,-1514.44,-1370.45,-159.456,-1096.81,-1471.65,-1476.35,-1394.42,-1526.11 0|0:882:1,1,46,316,247,39,48,84,34:1:40:1,46,316,247,39,48,84,34:39,1770,12019,9547,895,1749,3364,1343:-1766.14,-1763.24,-1766.23,-1621.12,-1621.21,-1610.57,-780.749,-780.838,-638.725,-688.918,-982.405,-982.494,-840.381,0,-911.345,-1707.36,-1707.45,-1565.34,-724.968,-926.622,-1698.92,-1623.58,-1623.67,-1481.56,-641.185,-842.841,-1567.8,-1612.43,-1489.33,-1489.42,-1347.3,-506.926,-708.582,-1433.54,-1349.76,-1467.34,-1655.95,-1656.03,-1513.92,-673.546,-875.202,-1600.16,-1516.38,-1382.12,-1649.01 dDocent_Contig_1560 29 . T C 271.81 . AB=0.133333;ABP=178.176;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X;DP=389;DPB=389;DPRA=0.805369;EPP=50.7827;EPPR=797.769;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.227273;PAIREDR=0.510929;PAO=0;PQA=0;PQR=0;PRO=0;QA=865;QR=14085;RO=366;RPL=0;RPP=50.7827;RPPR=797.769;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=366;SRP=797.769;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:32,1:32:1250:1:41:0,-5.83942,-108.69 0/0:70:70,0:70:2672:0:0:0,-21.0721,-240.654 0/1:57:49,7:49:1863:7:279:-8.21472,0,-150.64 0/1:93:80,13:80:3049:13:527:-19.7799,0,-246.539 0/0:57:56,1:56:2155:1:18:0,-15.3587,-192.352 0/0:79:79,0:79:3096:0:0:0,-23.7814,-278.762 dDocent_Contig_1561 86 . T A 63.1789 . AB=0.123457;ABP=102.764;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=481;DPB=481;DPRA=1.0125;EPP=24.725;EPPR=1023.6;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.955319;PAO=0;PQA=0;PQR=0;PRO=0;QA=341;QR=16192;RO=470;RPL=10;RPP=24.725;RPPR=1023.6;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=470;SRP=1023.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:76:75,0:75:2560:0:0:0,-22.5772,-230.584 0/0:76:76,0:76:2587:0:0:0,-22.8783,-233.086 0/0:87:87,0:87:3072:0:0:0,-26.1896,-276.712 0/0:45:45,0:45:1563:0:0:0,-13.5463,-140.964 0/1:81:71,10:71:2451:10:341:-6.63665,0,-196.47 0/0:116:116,0:116:3959:0:0:0,-34.9195,-356.521 dDocent_Contig_1562 13 . T A 9029.33 . AB=0.561717;ABP=21.5047;AC=6;AF=0.5;AN=12;AO=314;CIGAR=1X1M1X;DP=559;DPB=559;DPRA=0;EPP=684.853;EPPR=524.164;GTI=0;LEN=1;MEANALT=1.5;MQM=51.3854;MQMR=57.8208;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.954167;PAO=0;PQA=0;PQR=0;PRO=0;QA=12284;QR=9322;RO=240;RPL=0;RPP=684.853;RPPR=524.164;RPR=314;RUN=1;SAF=314;SAP=684.853;SAR=0;SRF=240;SRP=524.164;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:86:46,40:46:1767:40:1585:-112.037,0,-133.388 0|1:91:37,52:37:1445:52:2012:-149.3,0,-98.5223 0|1:56:24,32:24:940:32:1243:-91.382,0,-61.7316 0|1:140:56,82:56:2189:82:3192:-236.563,0,-138.79 0|1:67:23,44:23:891:44:1735:-131.933,0,-60.3382 0|1:119:54,64:54:2090:64:2517:-185.715,0,-152.378 dDocent_Contig_1563 20 . G A 247.988 . AB=0.106299;ABP=344.974;AC=2;AF=0.166667;AN=12;AO=38;CIGAR=1X1M1X;DP=503;DPB=503;DPRA=0;EPP=77.0689;EPPR=962.878;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.894737;PAIREDR=0.982222;PAO=0;PQA=0;PQR=0;PRO=0;QA=1480;QR=17543;RO=450;RPL=0;RPP=85.5263;RPPR=980.173;RPR=38;RUN=1;SAF=37;SAP=77.0689;SAR=1;SRF=448;SRP=962.878;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:75:73,1,1:73:2805:1,1:41,41:0,-18.5911,-248.499,-18.5911,-245.416,-248.499 0|0:75:64,5,6:64:2477:5,6:188,240:-0.516516,-4.39249,-206.326,0,-188.061,-201.655 0|1:58:45,11,2:45:1787:11,2:421,78:-20.9918,0,-143.81,-28.1255,-140.71,-174.649 0|0:72:65,4,3:65:2575:4,3:159,114:0,-6.46676,-217.216,-10.2261,-209.072,-221.26 0|1:121:107,11,0:107:4144:11,0:446,0:-4.58412,0,-337.083,-36.7943,-340.394,-377.176 0|0:102:96,6,0:96:3755:6,0:225,0:0,-10.0971,-317.4,-28.8989,-319.206,-337.633 dDocent_Contig_1564 10 . C A 9992.58 . AB=0.723502;ABP=191.318;AC=6;AF=0.5;AN=12;AO=314;CIGAR=1X;DP=434;DPB=434;DPRA=0;EPP=684.853;EPPR=263.587;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.856688;PAIREDR=0.858333;PAO=0;PQA=0;PQR=0;PRO=0;QA=12587;QR=4831;RO=120;RPL=0;RPP=684.853;RPPR=263.587;RPR=314;RUN=1;SAF=314;SAP=684.853;SAR=0;SRF=120;SRP=263.587;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:67:22,45:22:869:45:1823:-144.105,0,-58.3461 0/1:80:28,52:28:1138:52:2042:-159.895,0,-78.6161 0/1:46:10,36:10:408:36:1457:-117.527,0,-23.2332 0/1:76:27,49:27:1095:49:1970:-154.613,0,-75.9538 0/1:83:16,67:16:641:67:2691:-217.315,0,-33.0367 0/1:82:17,65:17:680:65:2604:-209.8,0,-36.8422 dDocent_Contig_1565 9 . T C 318.57 . AB=0.108597;ABP=591.155;AC=1;AF=0.0833333;AN=12;AO=164;CIGAR=1X;DP=3115;DPB=3115;DPRA=0;EPP=359.132;EPPR=6406.68;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6277;QR=112733;RO=2949;RPL=0;RPP=359.132;RPPR=6406.68;RPR=164;RUN=1;SAF=164;SAP=359.132;SAR=0;SRF=2949;SRP=6406.68;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:373:346,26:346:13234:26:990:0,-22.8564,-1101.07 0/0:458:418,40:418:16016:40:1528:0,-0.0790109,-1302.87 0/1:442:393,48:393:15058:48:1834:-32.1661,0,-1221.35 0/0:550:503,47:503:19155:47:1808:0,-2.594,-1559.99 0/0:626:625,1:625:23926:1:39:0,-184.548,-2148.1 0/0:666:664,2:664:25344:2:78:0,-193.082,-2272.11 dDocent_Contig_1566 1 . N T 94.3308 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=32;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=121;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-5.97045,-0.60206,0 1/1:1:0,1:0:0:1:40:-3.13615,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1567 32 . T C 829.497 . AB=0.205882;ABP=156.291;AC=2;AF=0.166667;AN=12;AO=42;CIGAR=1X;DP=445;DPB=445;DPRA=1.69295;EPP=94.2121;EPPR=843.715;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.97619;PAIREDR=0.942928;PAO=0;PQA=0;PQR=0;PRO=0;QA=1606;QR=14688;RO=403;RPL=0;RPP=94.2121;RPPR=878.114;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=399;SRP=843.715;SRR=4;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:62:62,0:62:2268:0:0:0,-18.6639,-204.341 0/0:82:82,0:82:2949:0:0:0,-24.6845,-265.598 0/0:57:57,0:57:2099:0:0:0,-17.1587,-189.143 0/0:40:40,0:40:1407:0:0:0,-12.0412,-126.888 0/1:106:93,13:93:3422:13:518:-15.0581,0,-276.222 0/1:98:69,29:69:2543:29:1088:-68.7052,0,-199.57 dDocent_Contig_1568 5 . T A 68.5367 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X7I1M1X1M1X1M1X;DP=2;DPB=4.85714;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.21888;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=72;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:72:-6.83664,-0.60206,0 dDocent_Contig_1569 8 . C T 1319.84 . AB=0.21843;ABP=204.779;AC=2;AF=0.166667;AN=12;AO=83;CIGAR=1X;DP=987;DPB=987;DPRA=0.709559;EPP=183.243;EPPR=1929.26;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99557;PAO=0;PQA=0;PQR=0;PRO=0;QA=3181;QR=34585;RO=903;RPL=0;RPP=183.243;RPPR=1963.85;RPR=83;RUN=1;SAF=83;SAP=183.243;SAR=0;SRF=899;SRP=1929.26;SRR=4;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:144:98,46:98:3748:46:1754:-114.766,0,-294.082 0/0:141:131,9:131:5059:9:350:0,-10.5467,-423.467 0/0:145:135,10:135:5157:10:382:0,-8.91443,-429.402 0/1:149:131,18:131:4965:18:695:-18.0307,0,-402.021 0/0:198:198,0:198:7588:0:0:0,-59.6039,-682.749 0/0:210:210,0:210:8068:0:0:0,-63.2163,-725.906 dDocent_Contig_1570 53 . T G 737.401 . AB=0.107143;ABP=1279.22;AC=1;AF=0.0833333;AN=12;AO=144;CIGAR=1X;DP=5082;DPB=5082;DPRA=1.46368;EPP=315.702;EPPR=10719.2;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999595;PAO=0;PQA=0;PQR=0;PRO=0;QA=5596;QR=196497;RO=4935;RPL=144;RPP=315.702;RPPR=10719.2;RPR=0;RUN=1;SAF=144;SAP=315.702;SAR=0;SRF=4935;SRP=10719.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:701:700,0:700:27906:0:0:0,-210.721,-2508.78 0/0:895:886,8:886:35225:8:291:0,-242.851,-3140.48 0/0:593:593,0:593:23630:0:0:0,-178.511,-2124.65 0/0:1014:1013,1:1013:40534:1:9:0,-304.344,-3643.28 0/0:927:893,33:893:35497:33:1289:0,-162.779,-3075.23 0/1:952:850,102:850:33705:102:4007:-74.0589,0,-2743.82 dDocent_Contig_1571 39 . C T 6270.58 . AB=0.132424;ABP=4132.8;AC=4;AF=0.333333;AN=12;AO=620;CIGAR=1X;DP=5737;DPB=5737;DPRA=0;EPP=1349.32;EPPR=11103.6;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999413;PAO=0;PQA=0;PQR=0;PRO=0;QA=24878;QR=202655;RO=5112;RPL=0;RPP=1349.32;RPPR=11103.6;RPR=620;RUN=1;SAF=620;SAP=1349.32;SAR=0;SRF=5112;SRP=11103.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:723:604,118:604:23942:118:4763:-210.812,0,-1935.04 0/1:862:784,77:784:31128:77:3103:-20.0651,0,-2539.5 0/1:805:632,172:632:25083:172:6900:-378.486,0,-2013.13 0/0:1055:971,83:971:38457:83:3280:0,-22.3318,-3162.39 0/1:1129:1030,99:1030:40833:99:4000:-20.1005,0,-3331.36 0/0:1163:1091,71:1091:43212:71:2832:0,-95.2209,-3630.13 dDocent_Contig_1572 30 . G A 747.242 . AB=0.193717;ABP=158.64;AC=3;AF=0.25;AN=12;AO=43;CIGAR=1X;DP=395;DPB=395;DPRA=1.21071;EPP=96.3836;EPPR=767.369;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.790698;PAIREDR=0.647727;PAO=0;PQA=0;PQR=0;PRO=0;QA=1706;QR=13950;RO=352;RPL=0;RPP=96.3836;RPPR=767.369;RPR=43;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=352;SRP=767.369;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:59:40,19:40:1585:19:755:-50.5086,0,-125.134 0/1:73:60,13:60:2386:13:518:-24.9906,0,-192.923 0/0:56:56,0:56:2219:0:0:0,-16.8577,-199.882 0/1:59:54,5:54:2152:5:199:-0.527287,0,-176.103 0/0:63:58,5:58:2273:5:196:0,-0.94984,-186.734 0/0:85:84,1:84:3335:1:38:0,-21.7903,-296.414 dDocent_Contig_1573 98 . N C 85.9665 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=86;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:20:-1.99996,-0.30103,0 1/1:2:0,2:0:0:2:66:-6.26831,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1574 8 . T C 124833 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=3774;CIGAR=1X;DP=3902;DPB=3902;DPRA=0;EPP=8198.15;EPPR=274.444;GTI=0;LEN=1;MEANALT=1.33333;MQM=59.3317;MQMR=59.608;NS=6;NUMALT=1;ODDS=0;PAIRED=0.988076;PAIREDR=0.976;PAO=0;PQA=0;PQR=0;PRO=0;QA=144879;QR=4720;RO=125;RPL=0;RPP=8198.15;RPPR=274.444;RPR=3774;RUN=1;SAF=3774;SAP=8198.15;SAR=0;SRF=125;SRP=274.444;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:506:8,498:8:296:498:19063:-1655.1,-125.328,0 1/1:686:15,670:15:564:670:25670:-2227.07,-157.484,0 1/1:597:22,575:22:846:575:22058:-1881.04,-103.253,0 1/1:713:31,682:31:1191:682:26126:-2233.5,-107.148,0 1/1:751:24,727:24:920:727:28003:-2423.84,-142.958,0 1/1:649:25,622:25:903:622:23959:-2062,-113.559,0 dDocent_Contig_1575 65 . A C 8008.16 . AB=0.278788;ABP=493.934;AC=1;AF=0.0833333;AN=12;AO=394;CIGAR=1X;DP=3791;DPB=3791;DPRA=1.84396;EPP=858.57;EPPR=7377.33;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.997644;PAO=0;PQA=0;PQR=0;PRO=0;QA=15630;QR=133702;RO=3396;RPL=394;RPP=858.57;RPPR=7377.33;RPR=0;RUN=1;SAF=394;SAP=858.57;SAR=0;SRF=3396;SRP=7377.33;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:352:352,0:352:13853:0:0:0,-105.963,-1245.83 0/0:322:321,0:321:12635:0:0:0,-96.6306,-1136.08 0/0:332:331,1:331:12966:1:13:0,-98.642,-1164.78 0/0:659:659,0:659:25861:0:0:0,-198.379,-2325.41 0/0:971:900,71:900:35495:71:2842:0,-36.4193,-2935.6 0/1:1155:833,322:833:32892:322:12775:-801.134,0,-2609.73 dDocent_Contig_1576 48 . A T 266.9 . AB=0.19697;ABP=55.6521;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=279;DPB=279;DPRA=1.5493;EPP=31.2394;EPPR=580.622;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.461538;PAIREDR=0.721805;PAO=0;PQA=0;PQR=0;PRO=0;QA=517;QR=10518;RO=266;RPL=0;RPP=31.2394;RPPR=580.622;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=266;SRP=580.622;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:53:53,0:53:2107:0:0:0,-15.9546,-189.813 0/0:47:47,0:47:1866:0:0:0,-14.1484,-168.153 0/0:32:32,0:32:1277:0:0:0,-9.63296,-115.2 0/0:56:56,0:56:2164:0:0:0,-16.8577,-194.937 0/0:25:25,0:25:1001:0:0:0,-7.52575,-90.387 0/1:66:53,13:53:2103:13:517:-27.0087,0,-169.59 dDocent_Contig_1577 31 . A T 77.1808 . AB=0.0980392;ABP=360.877;AC=1;AF=0.0833333;AN=12;AO=31;CIGAR=1X;DP=1308;DPB=1308;DPRA=2.1371;EPP=70.3259;EPPR=2771.64;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.985098;PAO=0;PQA=0;PQR=0;PRO=0;QA=1160;QR=50377;RO=1275;RPL=0;RPP=70.3259;RPPR=2771.64;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=1275;SRP=2771.64;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:153:153,0:153:6036:0:0:0,-46.0576,-543.04 0/0:217:213,4:213:8363:4:147:0,-51.7361,-738.665 0/0:95:94,0:94:3733:0:0:0,-28.2968,-335.891 0/0:278:277,1:277:10965:1:38:0,-79.8891,-982.355 0/1:255:229,25:229:9099:25:937:-8.03684,0,-741.806 0/0:310:309,1:309:12181:1:38:0,-89.522,-1091.66 dDocent_Contig_1578 9 . G A 841.188 . AB=0.120211;ABP=951.416;AC=2;AF=0.166667;AN=12;AO=124;CIGAR=1X;DP=2385;DPB=2385;DPRA=1.21543;EPP=272.273;EPPR=4910.54;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999558;PAO=0;PQA=0;PQR=0;PRO=0;QA=4718;QR=86445;RO=2260;RPL=0;RPP=272.273;RPPR=4910.54;RPR=124;RUN=1;SAF=124;SAP=272.273;SAR=0;SRF=2260;SRP=4910.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:236:223,13:223:8488:13:492:0,-26.4189,-719.065 0/0:475:456,19:456:17447:19:717:0,-78.1312,-1504.49 0/1:235:191,44:191:7243:44:1664:-79.2791,0,-580.991 0/1:522:475,47:475:18246:47:1806:-5.65332,0,-1484.05 0/0:337:337,0:337:12875:0:0:0,-101.447,-1158.2 0/0:580:578,1:578:22146:1:39:0,-170.789,-1988.01 dDocent_Contig_1579 1 . N G 109.177 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=110;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:30:-2.99957,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:80:-7.59157,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_1580 61 . A G 130.081 . AB=0.118812;ABP=130.482;AC=1;AF=0.0833333;AN=12;AO=28;CIGAR=1X;DP=864;DPB=864;DPRA=0.915743;EPP=63.8115;EPPR=1818.36;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1126;QR=32970;RO=836;RPL=28;RPP=63.8115;RPPR=1818.36;RPR=0;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=836;SRP=1818.36;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:117:109,8:109:4308:8:325:0,-5.60087,-358.071 0/0:110:110,0:110:4380:0:0:0,-33.1133,-394.14 0/0:195:187,8:187:7385:8:319:0,-29.6258,-635.231 0/1:101:89,12:89:3471:12:482:-13.3268,0,-282.045 0/0:165:165,0:165:6480:0:0:0,-49.6699,-582.982 0/0:176:176,0:176:6946:0:0:0,-52.9813,-624.861 dDocent_Contig_1581 209 . N G 332.155 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=357;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:8:0,8:0:0:8:316:-28.8027,-2.40824,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1582 71 . C T 110.643 . AB=0.133333;ABP=73.0765;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=455;DPB=455;DPRA=0.926045;EPP=24.725;EPPR=967.144;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.6;PAIREDR=0.783784;PAO=0;PQA=0;PQR=0;PRO=0;QA=402;QR=17390;RO=444;RPL=10;RPP=24.725;RPPR=967.144;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=444;SRP=967.144;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:79:79,0:79:2981:0:0:0,-23.7814,-268.452 0/0:99:99,0:99:3780:0:0:0,-29.802,-340.301 0/0:59:59,0:59:2353:0:0:0,-17.7608,-211.919 0/0:74:74,0:74:2982:0:0:0,-22.2762,-268.462 0/1:60:51,8:51:2043:8:322:-11.3831,0,-166.109 0/0:84:82,2:82:3251:2:80:0,-17.6947,-285.072 dDocent_Contig_1583 43 . T G 256.588 . AB=0.177215;ABP=74.504;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X2M1X;DP=345;DPB=345;DPRA=1.48496;EPP=33.4109;EPPR=3.01694;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.730887;PAO=0;PQA=0;PQR=0;PRO=0;QA=549;QR=12078;RO=327;RPL=0;RPP=33.4109;RPPR=713.082;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=164;SRP=3.01694;SRR=163;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:40:40,0:40:1472:0:0:0,-12.0412,-132.749 0|0:49:48,0:48:1732:0:0:0,-14.4494,-155.731 0|0:46:44,0:44:1645:0:0:0,-13.2453,-147.924 0|0:81:81,0:81:3019:0:0:0,-24.3834,-271.87 0|0:50:50,0:50:1840:0:0:0,-15.0515,-165.849 0|1:79:64,14:64:2370:14:549:-25.9775,0,-189.73 dDocent_Contig_1584 98 . N G 46.9331 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=2X;DP=3;DPB=23;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=24.6667;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=11;PQA=359;PQR=0;PRO=0;QA=86;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:1:0,1:0:0:1:19:-1.70469,-0.30103,0 .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:67:-2.6578,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_1585 10 . C T 361.51 . AB=0.136752;ABP=271.196;AC=2;AF=0.166667;AN=12;AO=42;CIGAR=1X;DP=532;DPB=532;DPRA=1.28523;EPP=94.2121;EPPR=1064.86;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1572;QR=19577;RO=489;RPL=0;RPP=94.2121;RPPR=1064.86;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=489;SRP=1064.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:71:56,15:56:2219:15:565:-29.8128,0,-178.503 0/0:76:70,6:70:2813:6:230:0,-1.81139,-232.203 0/1:163:146,17:146:5879:17:621:-7.15163,0,-479.806 0/0:73:69,4:69:2752:4:156:0,-7.55837,-233.359 0/0:65:65,0:65:2601:0:0:0,-19.5669,-234.219 0/0:84:83,0:83:3313:0:0:0,-24.9855,-297.837 dDocent_Contig_1586 98 . N G 209.342 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=12;CIGAR=1X;DP=12;DPB=12;DPRA=0;EPP=29.068;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=5.42101e-20;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=212;QR=0;RO=0;RPL=12;RPP=29.068;RPPR=0;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:20:-1.89999,-0.60206,0 1/1:2:0,2:0:0:2:56:-5.31947,-0.60206,0 1/1:1:0,1:0:0:1:27:-2.69978,-0.30103,0 1/1:2:0,2:0:0:2:25:-2.37496,-0.60206,0 1/1:4:0,4:0:0:4:76:-7.02929,-1.20412,0 1/1:1:0,1:0:0:1:8:-0.799998,-0.30103,0 dDocent_Contig_1587 51 . C T 259.967 . AB=0.122727;ABP=274.997;AC=1;AF=0.0833333;AN=12;AO=72;CIGAR=1X;DP=1710;DPB=1710;DPRA=4.02222;EPP=159.356;EPPR=3555.54;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2707;QR=63270;RO=1636;RPL=72;RPP=159.356;RPPR=3555.54;RPR=0;RUN=1;SAF=72;SAP=159.356;SAR=0;SRF=1636;SRP=3555.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:311:305,5:305:11567:5:201:0,-74.9907,-1021.96 0/0:418:405,13:405:15678:13:436:0,-86.293,-1370.47 0/1:220:193,27:193:7535:27:1025:-26.3155,0,-611.599 0/0:375:349,25:349:13584:25:964:0,-25.6139,-1134.63 0/0:81:81,0:81:3160:0:0:0,-24.3834,-284.482 0/0:305:303,2:303:11746:2:81:0,-84.1284,-1048.73 dDocent_Contig_1588 13 . T C 718.791 . AB=0.149206;ABP=339.699;AC=3;AF=0.25;AN=12;AO=53;CIGAR=1X;DP=620;DPB=620;DPRA=0.692086;EPP=118.098;EPPR=1234.24;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.962264;PAIREDR=0.950617;PAO=0;PQA=0;PQR=0;PRO=0;QA=2097;QR=22806;RO=567;RPL=0;RPP=118.098;RPPR=1234.24;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=567;SRP=1234.24;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:82:78,4:78:3138:4:158:0,-10.084,-267.884 0/1:104:87,17:87:3519:17:674:-29.6819,0,-285.421 0/1:94:82,12:82:3273:12:471:-14.4418,0,-266.324 0/1:117:99,18:99:3985:18:714:-29.3649,0,-323.401 0/0:84:82,2:82:3291:2:80:0,-17.6947,-288.652 0/0:139:139,0:139:5600:0:0:0,-41.8432,-503.797 dDocent_Contig_1589 11 . T C 3375.81 . AB=0.162386;ABP=1197.99;AC=5;AF=0.416667;AN=12;AO=211;CIGAR=1X;DP=1493;DPB=1493;DPRA=0;EPP=461.191;EPPR=2771.64;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999216;PAO=0;PQA=0;PQR=0;PRO=0;QA=8382;QR=50301;RO=1275;RPL=0;RPP=461.191;RPPR=2771.64;RPR=211;RUN=1;SAF=211;SAP=461.191;SAR=0;SRF=1275;SRP=2771.64;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:211:173,38:173:6854:38:1517:-73.26,0,-553.066 0/1:300:258,42:258:10192:42:1667:-59.9479,0,-826.354 0/1:185:150,35:150:5940:35:1393:-69.932,0,-478.717 0/1:332:273,52:273:10755:52:2058:-87.2943,0,-869.202 0/1:179:150,29:150:5910:29:1155:-50.3478,0,-477.851 0/0:286:271,15:271:10650:15:592:0,-32.4819,-904.247 dDocent_Contig_1590 7 . T C 13366.7 . AB=0.0747253;ABP=1432.55;AC=0;AF=0;AN=12;AO=68;CIGAR=4X2M1X6M;DP=910;DPB=910;DPRA=0;EPP=150.67;EPPR=524.164;GTI=0;LEN=1;MEANALT=6.16667;MQM=21.8088;MQMR=60;NS=6;NUMALT=7;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1471;QR=9326;RO=240;RPL=0;RPP=150.67;RPPR=524.164;RPR=68;RUN=1;SAF=68;SAP=150.67;SAR=0;SRF=240;SRP=524.164;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:154:30,14,5,4,69,13,9,8:30:1165:14,5,4,69,13,9,8:532,105,162,2731,505,346,311:-215.731,-181.214,-272.726,-218.173,-270.35,-312.392,-211.403,-263.582,-300.539,-305.926,0,-52.183,-89.1466,-82.3729,-74.9614,-183.264,-235.442,-272.4,-265.632,-54.2325,-275.077,-196.365,-248.543,-285.5,-278.732,-67.3341,-250.593,-289.382,-199.21,-251.388,-288.346,-281.578,-70.1794,-253.438,-266.539,-292.528 0|0:174:55,10,10,6,66,2,0,22:55:2130:10,10,6,66,2,0,22:387,223,236,2629,78,0,874:-199.948,-184.722,-356.687,-201.974,-345.161,-373.933,-197.092,-340.285,-357.531,-370.261,0,-143.206,-160.459,-155.576,-155.121,-210.093,-353.285,-370.531,-365.655,-168.577,-384.465,-216.505,-359.697,-376.943,-372.067,-174.989,-385.067,-391.479,-144.549,-287.743,-304.991,-300.113,-103.031,-313.114,-319.525,-312.903 0|0:109:34,13,1,0,50,0,5,6:34:1323:13,1,0,50,0,5,6:500,21,0,1991,0,196,239:-153.711,-124.537,-229.346,-162.629,-231.942,-271.051,-163.946,-233.259,-271.352,-272.669,0,-69.323,-107.417,-108.733,-93.6812,-163.946,-233.259,-271.352,-272.669,-108.733,-272.669,-147.83,-217.143,-255.236,-256.554,-92.6163,-256.554,-255.049,-144.265,-213.578,-251.671,-252.989,-89.0506,-252.989,-236.873,-251.182 0|0:150:75,9,3,10,40,4,0,7:75:2909:9,3,10,40,4,0,7:354,63,406,1574,156,0,273:-106.899,-100.369,-336.658,-125.526,-335.413,-363.615,-95.9872,-305.881,-331.032,-331.976,0,-209.903,-235.056,-205.522,-226.968,-116.652,-326.544,-351.695,-322.163,-226.185,-354.445,-129.476,-339.368,-364.518,-334.987,-239.009,-355.649,-368.473,-107.036,-316.928,-342.079,-312.547,-216.57,-333.21,-346.034,-343.927 0|0:132:15,0,29,0,88,0,0,0:15:580:0,29,0,88,0,0,0:0,639,0,3462,0,0,0:-280.369,-284.884,-332.528,-243.785,-291.424,-282.694,-284.884,-332.528,-291.424,-332.528,0,-47.7058,-6.68578,-47.7058,-21.2151,-284.884,-332.528,-291.424,-332.528,-47.7058,-332.528,-284.884,-332.528,-291.424,-332.528,-47.7058,-332.528,-332.528,-284.884,-332.528,-291.424,-332.528,-47.7058,-332.528,-332.528,-332.528 0|0:191:31,19,20,0,119,1,0,0:31:1219:19,20,0,119,1,0,0:737,420,0,4773,39,0,0:-384.006,-332.803,-427.361,-366.973,-406.714,-461.225,-393.338,-433.081,-467.245,-493.615,0,-39.7673,-73.986,-100.319,-64.4969,-390.132,-429.875,-464.04,-490.409,-97.1127,-490.108,-393.338,-433.081,-467.245,-493.615,-100.319,-490.409,-493.615,-393.338,-433.081,-467.245,-493.615,-100.319,-490.409,-493.615,-493.615 dDocent_Contig_1591 98 . N A 168.293 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0.6;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=169;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:103:-9.60997,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_1592 41 . C T 11165.2 . AB=0.242872;ABP=1130.87;AC=6;AF=0.5;AN=12;AO=477;CIGAR=1X;DP=1964;DPB=1964;DPRA=0;EPP=1038.8;EPPR=3229.82;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997308;PAO=0;PQA=0;PQR=0;PRO=0;QA=19015;QR=59533;RO=1486;RPL=0;RPP=1038.8;RPPR=3229.82;RPR=477;RUN=1;SAF=477;SAP=1038.8;SAR=0;SRF=1486;SRP=3229.82;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:253:177,76:177:7049:76:3035:-197.079,0,-557.9 0/1:342:236,106:236:9518:106:4190:-274.118,0,-753.042 0/1:314:211,103:211:8476:103:4124:-276.592,0,-667.811 0/1:317:236,80:236:9409:80:3158:-188.847,0,-750.776 0/1:403:358,45:358:14370:45:1797:-40.632,0,-1170.86 0/1:335:268,67:268:10711:67:2711:-143.252,0,-862.424 dDocent_Contig_1594 45 . C A 465.414 . AB=0.365385;ABP=11.1951;AC=1;AF=0.0833333;AN=12;AO=24;CIGAR=1X;DP=247;DPB=247;DPRA=1.04132;EPP=6.26751;EPPR=3.79904;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.583333;PAIREDR=0.654709;PAO=0;PQA=0;PQR=0;PRO=0;QA=873;QR=8073;RO=223;RPL=0;RPP=55.1256;RPPR=487.249;RPR=24;RUN=1;SAF=9;SAP=6.26751;SAR=15;SRF=107;SRP=3.79904;SRR=116;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:33,3:33:1150:3:110:0,-0.577901,-93.5259 0/0:38:36,2:36:1350:2:72:0,-4.60242,-114.94 0/0:48:48,0:48:1794:0:0:0,-14.4494,-161.701 0/1:52:33,19:33:1200:19:691:-46.8571,0,-92.6351 0/0:34:34,0:34:1185:0:0:0,-10.235,-106.929 0/0:39:39,0:39:1394:0:0:0,-11.7402,-125.733 dDocent_Contig_1595 17 . A T 3744.37 . AB=0.28;ABP=87.0897;AC=2;AF=0.166667;AN=12;AO=56;CIGAR=1X2M1X1M;DP=329;DPB=360.2;DPRA=0;EPP=124.613;EPPR=200.614;GTI=0;LEN=1;MEANALT=3.25;MQM=59.5179;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=1;PAIREDR=0.901099;PAO=0;PQA=0;PQR=0;PRO=0;QA=2121;QR=3556;RO=91;RPL=0;RPP=124.613;RPPR=200.614;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=91;SRP=200.614;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:38:6,0,14,3,7,8:6:239:0,14,3,7,8:0,522,122,283,314:-47.0427,-48.8489,-68.5315,-6.13656,-25.8173,-21.6029,-38.7837,-58.4668,-15.753,-57.5637,-25.5949,-45.2787,-2.56596,-35.2133,-43.1715,-23.0268,-42.7102,0,-32.6449,-19.4561,-40.3019 0|1:77:21,0,29,0,17,10:21:808:0,29,0,17,10:0,1097,0,669,389:-83.5966,-89.9183,-156.246,0,-66.3289,-57.599,-89.9183,-156.246,-66.3289,-156.246,-35.9028,-102.232,-12.3139,-102.232,-97.1146,-60.589,-126.915,-37.0012,-126.915,-72.9026,-123.905 0|0:42:20,0,7,0,10,5:20:800:0,7,0,10,5:0,267,0,399,193:-26.8478,-32.8684,-98.7722,-11.0754,-76.9779,-74.8707,-32.8684,-98.7722,-76.9779,-98.7722,0,-65.9109,-44.1173,-65.9109,-62.9006,-17.2954,-83.1985,-61.4051,-83.1985,-50.3376,-81.6934 0|0:43:14,0,6,0,18,5:14:557:0,6,0,18,5:0,235,0,717,198:-54.5149,-58.7293,-104.593,-39.4059,-85.2692,-83.463,-58.7293,-104.593,-85.2692,-104.593,0,-45.865,-26.5421,-45.865,-40.4465,-42.4349,-88.2985,-68.975,-88.2985,-29.5707,-86.7934 0|0:78:15,32,0,0,20,10:15:574:32,0,0,20,10:1263,0,0,812,374:-110.019,-13.7341,-51.202,-114.534,-60.8349,-161.632,-114.534,-60.8349,-161.632,-161.632,-53.7004,0,-100.798,-100.798,-94.7772,-84.1948,-30.4949,-131.292,-131.292,-70.4589,-128.282 0|0:51:15,19,0,0,17,0:15:578:19,0,0,17,0:696,0,0,676,0:-56.4126,-6.37029,-48.1078,-60.9281,-53.8273,-108.39,-60.9281,-53.8273,-108.39,-108.39,-7.08548,0,-54.5569,-54.5569,-49.4394,-60.9281,-53.8273,-108.39,-108.39,-54.5569,-108.39 dDocent_Contig_1598 107 . N G 62.9568 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=57.3333;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=61;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:2:0,2:0:0:2:26:-2.46996,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1599 107 . N C 159.427 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0.333333;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=162;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:60:-5.59895,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 dDocent_Contig_1602 107 . N T 120.328 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=126;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:31:-3.04854,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:95:-8.66183,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1603 107 . N T 98.2736 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=29.2;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:7:-0.699826,-0.30103,0 1/1:2:0,2:0:0:2:51:-4.12605,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:31:-3.04854,-0.30103,0 1/1:1:0,1:0:0:1:34:-1.29674,-0.30103,0 dDocent_Contig_1606 11 . G A 400.931 . AB=0.118902;ABP=416.782;AC=3;AF=0.25;AN=12;AO=56;CIGAR=1X;DP=698;DPB=698;DPRA=0;EPP=124.613;EPPR=1345.47;GTI=0;LEN=1;MEANALT=1;MQM=56.1786;MQMR=59.5639;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0892857;PAIREDR=0.506231;PAO=0;PQA=0;PQR=0;PRO=0;QA=2225;QR=25425;RO=642;RPL=0;RPP=124.613;RPPR=1397.1;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=636;SRP=1345.47;SRR=6;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:95:87,8:87:3452:8:322:-0.542462,0,-279.838 0/1:108:92,16:92:3662:16:628:-24.2437,0,-296.656 0/0:120:110,10:110:4376:10:392:0,-0.550933,-357.919 0/1:125:110,15:110:4385:15:600:-16.6215,0,-356.967 0/0:101:100,1:100:3908:1:41:0,-26.3095,-347.643 0/0:149:143,6:143:5642:6:242:0,-22.8065,-484.74 dDocent_Contig_1607 67 . T A 6116.49 . AB=0.240913;ABP=692.758;AC=2;AF=0.166667;AN=12;AO=298;CIGAR=11M1X1M;DP=3225;DPB=3144.54;DPRA=0.908297;EPP=650.109;EPPR=6085.3;GTI=0;LEN=1;MEANALT=7;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11221;QR=107530;RO=2801;RPL=298;RPP=650.109;RPPR=6085.3;RPR=0;RUN=1;SAF=298;SAP=650.109;SAR=0;SRF=2801;SRP=6085.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:410:372,25,6:372:14094:25,6:898,234:0,-38.6936,-1186.76,-92.7375,-1175.05,-1246.49 0|0:487:440,35,7:440:16656:35,7:1211,258:0,-34.0537,-1388.99,-111.352,-1378.43,-1474.71 0|0:516:477,35,0:477:18501:35,0:1269,0:0,-39.9293,-1549.47,-143.591,-1560.01,-1663.59 0|0:629:626,0,0:626:24025:0,0:0,0:0,-188.445,-2160.4,-188.445,-2160.4,-2160.4 0|1:496:367,0,123:367:14187:0,123:0,4587:-265.083,-375.561,-1540.78,0,-1165.3,-1128.27 0|1:687:519,0,162:519:20067:0,162:0,6142:-347.379,-503.614,-2151.78,0,-1648.2,-1599.43 dDocent_Contig_1608 18 . G C 395.837 . AB=0.220339;ABP=83.1708;AC=4;AF=0.333333;AN=12;AO=28;CIGAR=1X;DP=168;DPB=168;DPRA=1.26087;EPP=63.8115;EPPR=307.016;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.578571;PAO=0;PQA=0;PQR=0;PRO=0;QA=914;QR=5360;RO=140;RPL=0;RPP=63.8115;RPPR=307.016;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=140;SRP=307.016;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:25,2:25:950:2:67:0,-1.76467,-79.4368 0/1:44:35,9:35:1323:9:292:-13.3526,0,-106.075 0/1:25:19,6:19:693:6:195:-10.3443,0,-55.1433 0/0:23:23,0:23:913:0:0:0,-6.92369,-82.4757 0/1:28:20,8:20:773:8:264:-15.6546,0,-61.4566 0/1:21:18,3:18:708:3:96:-2.63633,0,-57.7213 dDocent_Contig_1609 105 . N C 98.9673 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=2X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=102;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:1:0,1:0:0:1:33:-3.22103,-0.30103,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:69:-6.34924,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_1610 50 . C T 258.361 . AB=0.166667;ABP=89.8692;AC=2;AF=0.166667;AN=12;AO=28;CIGAR=1X;DP=315;DPB=315;DPRA=1.06;EPP=63.8115;EPPR=626.223;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.958188;PAO=0;PQA=0;PQR=0;PRO=0;QA=1085;QR=11176;RO=287;RPL=28;RPP=63.8115;RPPR=626.223;RPR=0;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=287;SRP=626.223;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:74:68,6:68:2673:6:225:0,-1.66844,-220.102 0/1:49:42,7:42:1623:7:273:-10.1858,0,-131.546 0/1:41:33,8:33:1270:8:316:-16.4636,0,-102.214 0/0:59:55,4:55:2133:4:160:0,-2.97718,-177.372 0/0:42:39,3:39:1520:3:111:0,-2.29277,-126.686 0/0:50:50,0:50:1957:0:0:0,-15.0515,-176.34 dDocent_Contig_1611 17 . C T 6529.2 . AB=0.209478;ABP=1070.43;AC=5;AF=0.416667;AN=12;AO=322;CIGAR=1X;DP=1764;DPB=1764;DPRA=0;EPP=702.224;EPPR=3134.27;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=12846;QR=57556;RO=1442;RPL=0;RPP=702.224;RPPR=3134.27;RPR=322;RUN=1;SAF=322;SAP=702.224;SAR=0;SRF=1442;SRP=3134.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:237:194,43:194:7720:43:1730:-84.5741,0,-623.058 0/1:276:188,88:188:7474:88:3514:-233.213,0,-589.192 0/1:351:259,92:259:10430:92:3665:-224.207,0,-832.314 0/1:354:323,31:323:12887:31:1225:-3.95976,0,-1052.33 0/1:238:187,51:187:7478:51:2018:-110.168,0,-600.982 0/0:308:291,17:291:11567:17:694:0,-29.9296,-977.414 dDocent_Contig_1612 79 . G A 49.3625 . AB=0.12069;ABP=75.4926;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=309;DPB=309;DPRA=0.565517;EPP=26.8965;EPPR=650.109;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.909091;PAIREDR=0.919463;PAO=0;PQA=0;PQR=0;PRO=0;QA=365;QR=10292;RO=298;RPL=11;RPP=26.8965;RPPR=650.109;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=298;SRP=650.109;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:27,4:27:916:4:142:-3.79734,0,-73.4198 0/0:68:66,2:66:2242:2:72:0,-13.6333,-195.213 0/1:27:24,3:24:840:3:108:-1.94736,0,-67.79 0/0:122:122,0:122:4247:0:0:0,-36.7257,-382.421 0/0:23:23,0:23:806:0:0:0,-6.92369,-72.8602 0/0:38:36,2:36:1241:2:43:0,-7.35578,-107.906 dDocent_Contig_1613 7 . G T 5508.04 . AB=0.400749;ABP=48.7007;AC=2;AF=0.166667;AN=12;AO=289;CIGAR=1X;DP=1474;DPB=1474;DPRA=0;EPP=630.566;EPPR=2565.35;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.99654;PAIREDR=0.99661;PAO=0;PQA=0;PQR=0;PRO=0;QA=10177;QR=36996;RO=1180;RPL=0;RPP=630.566;RPPR=2565.35;RPR=289;RUN=1;SAF=289;SAP=630.566;SAR=0;SRF=1180;SRP=2565.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:237:220,17:220:6946:17:531:0,-23.2724,-577.086 0/0:259:239,19:239:7350:19:590:0,-24.5227,-608.094 0/0:173:154,18:154:4894:18:452:0,-10.984,-399.653 0/0:271:249,21:249:7738:21:694:0,-18.9024,-633.636 0/1:210:128,80:128:3938:80:2993:-206.591,0,-291.608 0/1:324:190,134:190:6130:134:4917:-345.026,0,-454.222 dDocent_Contig_1614 24 . A T 3646.85 . AB=0.0661765;ABP=669.972;AC=0;AF=0;AN=12;AO=27;CIGAR=1M10D3X;DP=655;DPB=635.643;DPRA=0.842975;EPP=61.6401;EPPR=991.03;GTI=0;LEN=1;MEANALT=3.25;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1060;QR=17841;RO=455;RPL=0;RPP=61.6401;RPPR=991.03;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=455;SRP=991.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:60:30,2,27:30:1175:2,27:76,976:-70.6934,-73.4899,-169.524,0,-90.4814,-88.586 0|0:108:69,13,25:69:2696:13,25:509,945:-56.6935,-35.6033,-253.34,0,-179.796,-214.124 0|0:100:66,3,30:66:2608:3,30:120,1132:-72.8848,-82.8662,-296.59,0,-204.723,-205.577 0|0:140:76,9,52:76:2966:9,52:355,1926:-134.699,-128.365,-369.478,0,-214.626,-228.181 0|0:126:95,0,20:95:3719:0,20:0,751:-32.9147,-61.5126,-367.311,0,-305.795,-299.774 0|0:121:119,0,2:119:4677:0,2:0,77:0,-35.8226,-420.518,-29.1155,-414.196,-413.594 dDocent_Contig_1615 9 . G C 9920.93 . AB=0.566667;ABP=26.1727;AC=2;AF=0.166667;AN=12;AO=364;CIGAR=1X;DP=1591;DPB=1591;DPRA=1.45936;EPP=793.426;EPPR=2658.72;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13947;QR=46906;RO=1223;RPL=0;RPP=793.426;RPPR=2658.72;RPR=364;RUN=1;SAF=364;SAP=793.426;SAR=0;SRF=1223;SRP=2658.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:143:143,0:143:5461:0:0:0,-43.0473,-491.474 0/0:294:290,4:290:11121:4:156:0,-74.0855,-986.048 0/0:263:262,0:262:10095:0:0:0,-78.8699,-907.81 0/0:291:271,20:271:10398:20:751:0,-19.6933,-867.539 0/1:234:105,128:105:4011:128:4883:-368.965,0,-290.553 0/1:366:152,212:152:5820:212:8157:-623.941,0,-413.788 dDocent_Contig_1616 21 . A T 124.828 . AB=0.123596;ABP=112.535;AC=1;AF=0.0833333;AN=12;AO=27;CIGAR=1X;DP=704;DPB=704;DPRA=1.04058;EPP=61.6401;EPPR=1473.1;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998523;PAO=0;PQA=0;PQR=0;PRO=0;QA=1078;QR=26833;RO=677;RPL=0;RPP=61.6401;RPPR=1473.1;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=677;SRP=1473.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:107:100,7:100:3976:7:286:0,-6.09539,-331.713 0/0:163:154,9:154:6103:9:356:0,-16.6685,-516.64 0/1:89:78,11:78:3110:11:436:-12.8016,0,-253.183 0/0:120:120,0:120:4741:0:0:0,-36.1236,-426.605 0/0:108:108,0:108:4274:0:0:0,-32.5112,-384.623 0/0:117:117,0:117:4629:0:0:0,-35.2205,-416.54 dDocent_Contig_1617 84 . G T 3550.54 . AB=0.609302;ABP=25.3209;AC=6;AF=0.5;AN=12;AO=131;CIGAR=1X;DP=215;DPB=215;DPRA=0;EPP=287.473;EPPR=185.414;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.862595;PAIREDR=0.833333;PAO=0;PQA=0;PQR=0;PRO=0;QA=4687;QR=2907;RO=84;RPL=131;RPP=287.473;RPPR=185.414;RPR=0;RUN=1;SAF=131;SAP=287.473;SAR=0;SRF=84;SRP=185.414;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:11,21:11:385:21:744:-57.6501,0,-25.3533 0/1:40:24,16:24:815:16:573:-39.8622,0,-61.623 0/1:36:24,12:24:834:12:429:-28.112,0,-64.5392 0/1:33:11,22:11:394:22:780:-60.5889,0,-25.8675 0/1:30:4,26:4:140:26:943:-76.158,0,-3.91368 0/1:44:10,34:10:339:34:1218:-96.6802,0,-17.5911 dDocent_Contig_1618 48 . G A 39684.6 . AB=0.888095;ABP=552.476;AC=10;AF=0.833333;AN=12;AO=1171;CIGAR=1X;DP=1237;DPB=1237;DPRA=0;EPP=2545.8;EPPR=139.813;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.959863;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=46229;QR=2495;RO=63;RPL=0;RPP=2545.8;RPPR=139.813;RPR=1171;RUN=1;SAF=1171;SAP=2545.8;SAR=0;SRF=63;SRP=139.813;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:184:22,162:22:848:162:6397:-520.11,0,-21.2404 0/1:236:24,211:24:960:211:8337:-679.088,0,-15.8668 1/1:134:5,129:5:200:129:5130:-443.186,-21.9585,0 1/1:276:12,263:12:487:263:10367:-888.26,-38.7068,0 1/1:158:0,157:0:0:157:6192:-556.672,-47.2617,0 1/1:249:0,249:0:0:249:9806:-881.954,-74.9565,0 dDocent_Contig_1619 21 . G C 6695.4 . AB=0.676596;ABP=66.6668;AC=7;AF=0.583333;AN=12;AO=206;CIGAR=1X;DP=282;DPB=282;DPRA=0;EPP=450.334;EPPR=168.042;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.912621;PAIREDR=0.934211;PAO=0;PQA=0;PQR=0;PRO=0;QA=8244;QR=3024;RO=76;RPL=0;RPP=450.334;RPPR=168.042;RPR=206;RUN=1;SAF=206;SAP=450.334;SAR=0;SRF=76;SRP=168.042;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:8,18:8:317:18:715:-56.8507,0,-21.0673 0/1:54:20,34:20:801:34:1369:-107.211,0,-56.1457 0/1:52:7,45:7:286:45:1787:-145.386,0,-10.4613 0/1:40:16,24:16:642:24:958:-74.4772,0,-46.0726 1/1:47:0,47:0:0:47:1890:-170.296,-14.1484,0 0/1:63:25,38:25:978:38:1525:-118.52,0,-69.3558 dDocent_Contig_1620 15 . T C 167.733 . AB=0.107143;ABP=265.758;AC=1;AF=0.0833333;AN=12;AO=28;CIGAR=1X;DP=1485;DPB=1485;DPRA=1.80718;EPP=63.8115;EPPR=3164.67;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1117;QR=58336;RO=1456;RPL=0;RPP=63.8115;RPPR=3164.67;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=1456;SRP=3164.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:93:93,0:93:3721:0:0:0,-27.9958,-334.9 0/0:268:267,1:267:10706:1:36:0,-77.0778,-959.205 0/0:114:114,0:114:4588:0:0:0,-34.3174,-412.831 0/1:196:175,21:175:6988:21:842:-17.0921,0,-569.585 0/0:492:486,6:486:19474:6:239:0,-126.222,-1729.08 0/0:322:321,0:321:12859:0:0:0,-96.6306,-1155.92 dDocent_Contig_1621 45 . T G 5200.13 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=20;CIGAR=1M1X3M;DP=3558;DPB=3373.8;DPRA=0.591706;EPP=46.4397;EPPR=6925.84;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.999689;PAO=0;PQA=0;PQR=0;PRO=0;QA=785;QR=126526;RO=3220;RPL=0;RPP=46.4397;RPPR=6925.84;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=3220;SRP=6995.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:346:323,0,20:323:12636:0,20:0,785:0,-97.2327,-1136.12,-32.6806,-1071.57,-1065.55 0|0:635:634,0,0:634:24858:0,0:0,0:0,-190.853,-2235.28,-190.853,-2235.28,-2235.28 0|0:341:340,0,0:340:13419:0,0:0,0:0,-102.35,-1206.67,-102.35,-1206.67,-1206.67 0|0:428:428,0,0:428:16818:0,0:0,0:0,-128.841,-1512.48,-128.841,-1512.48,-1512.48 0|0:873:641,231,0:641:25292:231,0:8706,0:-520.332,0,-2011.45,-713.292,-2080.99,-2794.31 0|0:935:854,76,0:854:33503:76,0:2914,0:0,-17.8323,-2750.22,-257.08,-2773.1,-3012.25 dDocent_Contig_1622 55 . C A 1271.74 . AB=0.103715;ABP=2646.53;AC=2;AF=0.166667;AN=12;AO=238;CIGAR=1X;DP=5120;DPB=5120;DPRA=0.922807;EPP=519.821;EPPR=10599.8;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999795;PAO=0;PQA=0;PQR=0;PRO=0;QA=9330;QR=194030;RO=4880;RPL=238;RPP=519.821;RPPR=10599.8;RPR=0;RUN=1;SAF=238;SAP=519.821;SAR=0;SRF=4880;SRP=10599.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:741:721,20:721:28566:20:784:0,-152.182,-2497.53 0/0:912:911,0:911:36418:0:0:0,-274.238,-3273.82 0/0:715:714,1:714:28444:1:8:0,-214.436,-2556.6 0/0:814:798,16:798:31753:16:633:0,-187.734,-2797.59 0/1:993:900,93:900:35737:93:3624:-27.2862,0,-2914.14 0/1:945:836,108:836:33112:108:4281:-100.702,0,-2692.52 dDocent_Contig_1623 133 . T A 135.38 . AB=0.127119;ABP=145.518;AC=1;AF=0.0833333;AN=12;AO=35;CIGAR=1X;DP=650;DPB=650;DPRA=0;EPP=79.0118;EPPR=1336.29;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1303;QR=23040;RO=614;RPL=0;RPP=79.0118;RPPR=1336.29;RPR=35;RUN=1;SAF=0;SAP=79.0118;SAR=35;SRF=0;SRP=1336.29;SRR=614;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:86:82,4:82:3088:4:154:0,-11.6553,-263.842 0/0:62:58,4:58:2184:4:145:0,-5.25882,-183.379 0/0:153:149,4:149:5616:4:155:0,-31.7321,-491.096 0/0:91:89,2:89:3367:2:78:0,-19.9903,-295.771 0/0:140:133,6:133:4945:6:226:0,-21.2469,-424.424 0/1:118:103,15:103:3840:15:545:-13.8568,0,-310.193 dDocent_Contig_1624 48 . G T 1643.74 . AB=0.129683;ABP=1242.98;AC=3;AF=0.25;AN=12;AO=137;CIGAR=1X;DP=2074;DPB=2074;DPRA=0.973011;EPP=291.88;EPPR=4198.3;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999483;PAO=0;PQA=0;PQR=0;PRO=0;QA=5401;QR=76532;RO=1936;RPL=1;RPP=291.88;RPPR=4198.3;RPR=136;RUN=1;SAF=137;SAP=300.502;SAR=0;SRF=1936;SRP=4206.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:256:213,43:213:8455:43:1699:-76.0755,0,-683.434 0/1:428:380,47:380:15027:47:1875:-40.0197,0,-1222.38 0/1:357:312,45:312:12368:45:1746:-49.8881,0,-1004.8 0/0:329:327,2:327:12922:2:81:0,-91.3531,-1154.4 0/0:320:320,0:320:12653:0:0:0,-96.3296,-1137.9 0/0:384:384,0:384:15107:0:0:0,-115.596,-1358.52 dDocent_Contig_1626 9 . C T 2705 . AB=0.225284;ABP=407.464;AC=6;AF=0.5;AN=12;AO=139;CIGAR=1X;DP=617;DPB=617;DPRA=0;EPP=57.3908;EPPR=922.933;GTI=0;LEN=1;MEANALT=1;MQM=52.295;MQMR=59.1506;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.533473;PAO=0;PQA=0;PQR=0;PRO=0;QA=5163;QR=18378;RO=478;RPL=0;RPP=304.845;RPPR=1040.97;RPR=139;RUN=1;SAF=99;SAP=57.3908;SAR=40;SRF=464;SRP=922.933;SRR=14;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:78:60,18:60:2296:18:672:-36.4415,0,-183.236 0/1:142:110,32:110:4259:32:1195:-64.0566,0,-339.412 0/1:83:68,15:68:2605:15:574:-26.7395,0,-209.613 0/1:95:66,29:66:2530:29:1045:-63.4659,0,-199.125 0/1:88:71,17:71:2743:17:631:-30.1987,0,-220.514 0/1:131:103,28:103:3945:28:1046:-53.5953,0,-315.713 dDocent_Contig_1627 12 . C T 1428.74 . AB=0.33125;ABP=42.5854;AC=5;AF=0.416667;AN=12;AO=54;CIGAR=1X;DP=177;DPB=177;DPRA=0;EPP=120.27;EPPR=270.101;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.777778;PAIREDR=0.585366;PAO=0;PQA=0;PQR=0;PRO=0;QA=2179;QR=4832;RO=123;RPL=0;RPP=120.27;RPPR=270.101;RPR=54;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=123;SRP=270.101;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:25,7:25:995:7:282:-16.1185,0,-80.2192 0/1:22:20,2:20:777:2:81:-1.06307,0,-63.6197 0/0:17:16,1:16:633:1:41:0,-1.02294,-53.211 0/1:42:35,7:35:1362:7:286:-13.4716,0,-110.204 0/1:39:12,27:12:467:27:1092:-86.8235,0,-30.6359 0/1:25:15,10:15:598:10:397:-28.5601,0,-46.6343 dDocent_Contig_1628 12 . C G 229.36 . AB=0.132353;ABP=162.677;AC=3;AF=0.25;AN=12;AO=20;CIGAR=1X;DP=262;DPB=262;DPRA=1.17949;EPP=46.4397;EPPR=528.507;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.7;PAIREDR=0.921488;PAO=0;PQA=0;PQR=0;PRO=0;QA=796;QR=9669;RO=242;RPL=0;RPP=46.4397;RPPR=528.507;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=242;SRP=528.507;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:43:36,7:36:1448:7:266:-11.3538,0,-117.621 0/0:48:46,2:46:1842:2:81:0,-6.76371,-158.305 0/1:36:30,6:30:1206:6:246:-11.683,0,-97.9775 0/1:57:52,5:52:2092:5:203:-1.49435,0,-171.3 0/0:45:45,0:45:1798:0:0:0,-13.5463,-162.03 0/0:33:33,0:33:1283:0:0:0,-9.93399,-115.732 dDocent_Contig_1629 19 . G A 53.8072 . AB=0.109091;ABP=76.0113;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1M1D1M1X;DP=181;DPB=179.5;DPRA=0.873016;EPP=16.0391;EPPR=383.018;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.64;PAO=0;PQA=0;PQR=0;PRO=0;QA=245;QR=6821;RO=175;RPL=0;RPP=16.0391;RPPR=383.018;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=175;SRP=383.018;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:40:40,0:40:1545:0:0:0,-12.0412,-139.309 0|1:36:33,3:33:1295:3:123:-0.627708,0,-105.994 0|1:19:16,3:16:636:3:122:-5.65292,0,-51.8568 0|0:33:33,0:33:1296:0:0:0,-9.93399,-116.921 0|0:26:26,0:26:1001:0:0:0,-7.82678,-90.3911 0|0:27:27,0:27:1048:0:0:0,-8.12781,-94.6234 dDocent_Contig_1630 25 . A T 2819.58 . AB=0.340836;ABP=71.4431;AC=1;AF=0.0833333;AN=12;AO=180;CIGAR=1X;DP=2954;DPB=2954;DPRA=0.876138;EPP=393.875;EPPR=6026.67;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99964;PAO=0;PQA=0;PQR=0;PRO=0;QA=7099;QR=109570;RO=2774;RPL=0;RPP=393.875;RPPR=6026.67;RPR=180;RUN=1;SAF=180;SAP=393.875;SAR=0;SRF=2774;SRP=6026.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:649:634,15:634:25118:15:580:0,-142.838,-2205.96 0/0:647:631,16:631:24787:16:642:0,-136.654,-2170.63 0/0:552:522,30:522:20737:30:1172:0,-60.4125,-1758.86 0/0:549:549,0:549:21707:0:0:0,-165.265,-1951.86 0/0:246:233,13:233:9158:13:528:0,-26.1863,-775.836 0/1:311:205,106:205:8063:106:4177:-282.277,0,-631.64 dDocent_Contig_1631 24 . C T 564.761 . AB=0.0990196;ABP=1427.5;AC=1;AF=0.0833333;AN=12;AO=131;CIGAR=1X;DP=5613;DPB=5613;DPRA=1.37827;EPP=287.473;EPPR=11902.7;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9995;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997993;PAO=0;PQA=0;PQR=0;PRO=0;QA=5228;QR=218092;RO=5480;RPL=0;RPP=287.473;RPPR=11902.7;RPR=131;RUN=1;SAF=131;SAP=287.473;SAR=0;SRF=5480;SRP=11902.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:799:799,0:799:31804:0:0:0,-240.523,-2859.5 0/0:1072:1071,0:1071:42636:0:0:0,-322.403,-3832.99 0/0:617:616,0:616:24505:0:0:0,-185.434,-2202.89 0/0:835:835,0:835:33155:0:0:0,-251.36,-2981 0/0:1270:1240,30:1240:49331:30:1185:0,-275.378,-4328.18 0/1:1020:919,101:919:36661:101:4043:-56.7948,0,-2989.03 dDocent_Contig_1632 14 . T C 214.119 . AB=0.164384;ABP=74.4309;AC=3;AF=0.25;AN=12;AO=14;CIGAR=1X;DP=143;DPB=143;DPRA=1.38158;EPP=33.4109;EPPR=283.13;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.714286;PAIREDR=0.581395;PAO=0;PQA=0;PQR=0;PRO=0;QA=569;QR=5156;RO=129;RPL=0;RPP=33.4109;RPPR=283.13;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=129;SRP=283.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:14,2:14:564:2:82:-2.9632,0,-46.2845 0/1:34:30,4:30:1201:4:164:-4.91488,0,-98.1305 0/0:20:20,0:20:813:0:0:0,-6.0206,-73.4846 0/1:23:17,6:17:687:6:241:-15.1426,0,-55.2361 0/0:18:18,0:18:702:0:0:0,-5.41854,-63.5057 0/0:32:30,2:30:1189:2:82:0,-1.85328,-99.5096 dDocent_Contig_1633 1 . N G 48.5687 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.21888;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=51;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:51:-4.83984,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1634 98 . N T 43.9915 . AB=0;ABP=0;AC=2;AF=0.5;AN=4;AO=2;CIGAR=1X;DP=3;DPB=3;DPRA=2;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=59.5;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=41;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:41:-3.89396,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 0/0:1:0,0:0:0:0:0:0,0,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1635 98 . N G 407.459 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=13;CIGAR=1X;DP=13;DPB=13;DPRA=0;EPP=31.2394;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=5.42101e-20;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=427;QR=0;RO=0;RPL=13;RPP=31.2394;RPPR=0;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:5:0,5:0:0:5:168:-15.4511,-1.50515,0 1/1:2:0,2:0:0:2:63:-5.98364,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:98:-9.14405,-0.90309,0 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 dDocent_Contig_1636 54 . T C 156.478 . AB=0.137255;ABP=119.589;AC=1;AF=0.0833333;AN=12;AO=21;CIGAR=1X;DP=489;DPB=489;DPRA=1.47177;EPP=48.6112;EPPR=1019.26;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=766;QR=18000;RO=468;RPL=21;RPP=48.6112;RPPR=1019.26;RPR=0;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=468;SRP=1019.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:38,1:38:1466:1:41:0,-7.6456,-128.102 0/0:53:53,0:53:2032:0:0:0,-15.9546,-183.083 0/0:164:163,1:163:6257:1:40:0,-45.3732,-558.95 0/0:71:71,0:71:2719:0:0:0,-21.3731,-244.865 0/0:60:55,5:55:2136:5:170:0,-2.43645,-176.806 0/1:102:88,14:88:3390:14:515:-15.9665,0,-274.487 dDocent_Contig_1637 27 . T G 117547 . AB=0.895484;ABP=1055.88;AC=11;AF=0.916667;AN=12;AO=3544;CIGAR=1X;DP=3815;DPB=3815;DPRA=0;EPP=7698.71;EPPR=528.507;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.995767;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=140399;QR=9723;RO=242;RPL=0;RPP=7698.71;RPPR=528.507;RPR=3544;RUN=1;SAF=3544;SAP=7698.71;SAR=0;SRF=242;SRP=528.507;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:451:33,417:33:1320:417:16448:-1359.99,-16.4913,0 1/1:691:36,655:36:1459:655:25994:-2205.62,-76.4577,0 1/1:491:12,479:12:490:479:19090:-1672.06,-103.355,0 1/1:660:39,608:39:1556:608:24073:-2024.24,-54.8886,0 0/1:775:66,694:66:2626:694:27504:-2243.75,0,-7.28663 1/1:747:56,691:56:2272:691:27290:-2249.09,-20.2359,0 dDocent_Contig_1638 16 . T A 161.399 . AB=0.133333;ABP=108.11;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=356;DPB=356;DPRA=1.69173;EPP=29.068;EPPR=749.997;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=480;QR=13625;RO=344;RPL=0;RPP=29.068;RPPR=749.997;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=344;SRP=749.997;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:40,0:40:1579:0:0:0,-12.0412,-142.348 0/1:90:78,12:78:3062:12:480:-16.4586,0,-248.583 0/0:26:26,0:26:1053:0:0:0,-7.82678,-95.0585 0/0:41:41,0:41:1569:0:0:0,-12.3422,-141.438 0/0:71:71,0:71:2855:0:0:0,-21.3731,-257.039 0/0:88:88,0:88:3507:0:0:0,-26.4906,-315.653 dDocent_Contig_1639 51 . G A 833.725 . AB=0.212291;ABP=131.709;AC=2;AF=0.166667;AN=12;AO=50;CIGAR=1X;DP=536;DPB=536;DPRA=1.58667;EPP=111.584;EPPR=1056.17;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.987629;PAO=0;PQA=0;PQR=0;PRO=0;QA=2010;QR=19325;RO=485;RPL=50;RPP=111.584;RPPR=1056.17;RPR=0;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=485;SRP=1056.17;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:79:53,26:53:2126:26:1037:-69.8379,0,-167.731 0/1:100:88,12:88:3504:12:490:-14.3481,0,-285.289 0/0:60:60,0:60:2381:0:0:0,-18.0618,-214.441 0/0:68:63,4:63:2485:4:163:0,-5.51954,-208.735 0/0:93:90,3:90:3619:3:120:0,-16.8085,-314.534 0/0:136:131,5:131:5210:5:200:0,-22.5617,-450.381 dDocent_Contig_1640 24 . T A 15629.2 . AB=0.611765;ABP=49.1222;AC=8;AF=0.666667;AN=12;AO=484;CIGAR=1X;DP=656;DPB=656;DPRA=0;EPP=1054;EPPR=374.332;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.896694;PAIREDR=0.912281;PAO=0;PQA=0;PQR=0;PRO=0;QA=19089;QR=6760;RO=171;RPL=0;RPP=1054;RPPR=374.332;RPR=484;RUN=1;SAF=484;SAP=1054;SAR=0;SRF=171;SRP=374.332;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:97:43,54:43:1721:54:2148:-164.299,0,-125.911 0/1:114:43,70:43:1716:70:2782:-216.083,0,-120.237 0/1:98:32,66:32:1236:66:2605:-205.078,0,-82.0023 0/1:116:46,70:46:1812:70:2779:-215.312,0,-128.368 1/1:108:0,108:0:0:108:4249:-382.383,-32.5112,0 1/1:123:7,116:7:275:116:4526:-382.176,-11.9112,0 dDocent_Contig_1642 41 . C T 43571.1 . AB=0.793143;ABP=656.112;AC=8;AF=0.666667;AN=12;AO=1311;CIGAR=1X;DP=1508;DPB=1508;DPRA=0;EPP=2849.81;EPPR=430.79;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=52044;QR=7857;RO=197;RPL=0;RPP=2849.81;RPPR=430.79;RPR=1311;RUN=1;SAF=1311;SAP=2849.81;SAR=0;SRF=197;SRP=430.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:163:49,114:49:1947:114:4517:-357.403,0,-126.364 0/1:227:48,179:48:1913:179:7095:-569.905,0,-104.033 0/1:250:54,196:54:2169:196:7806:-626.892,0,-120.124 0/1:235:30,205:30:1190:205:8129:-660.44,0,-36.6317 1/1:309:6,303:6:240:303:11969:-1054.43,-71.0428,0 1/1:324:10,314:10:398:314:12528:-1090.45,-61.356,0 dDocent_Contig_1643 25 . T A 1380.95 . AB=0.269058;ABP=106.316;AC=5;AF=0.416667;AN=12;AO=61;CIGAR=1M1D5M1X;DP=249;DPB=241.375;DPRA=0;EPP=135.47;EPPR=411.247;GTI=0;LEN=1;MEANALT=1;MQM=59.623;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.95082;PAIREDR=0.994681;PAO=0;PQA=0;PQR=0;PRO=0;QA=2316;QR=7438;RO=188;RPL=0;RPP=135.47;RPPR=411.247;RPR=61;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=188;SRP=411.247;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:26:25,1:25:992:1:19:0,-5.92681,-87.6824 0|1:44:31,13:31:1201:13:499:-32.0061,0,-95.1298 0|1:81:72,9:72:2868:9:340:-6.56736,0,-233.856 0|1:48:33,15:33:1307:15:579:-37.9735,0,-103.453 0|1:31:14,17:14:559:17:649:-49.4036,0,-41.3218 0|1:19:13,6:13:511:6:230:-15.3453,0,-40.617 dDocent_Contig_1644 98 . N G 240.258 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=9;CIGAR=2X;DP=9;DPB=43;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=46;PQA=1426;PQR=0;PRO=0;QA=260;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:56:-5.03273,-0.60206,0 1|1:1:0,1:0:0:1:15:-1.33933,-0.30103,0 1|1:1:0,1:0:0:1:15:-1.33846,-0.30103,0 1|1:5:0,5:0:0:5:174:-15.6821,-1.50515,0 dDocent_Contig_1645 47 . A G 8680.66 . AB=0.445588;ABP=20.497;AC=2;AF=0.166667;AN=12;AO=304;CIGAR=1X;DP=2122;DPB=2122;DPRA=1.03257;EPP=663.138;EPPR=3939.89;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11962;QR=71053;RO=1817;RPL=0;RPP=663.138;RPPR=3939.89;RPR=304;RUN=1;SAF=304;SAP=663.138;SAR=0;SRF=1817;SRP=3948.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:336:336,0:336:12969:0:0:0,-101.146,-1166.45 0/0:491:491,0:491:19213:0:0:0,-147.806,-1727.75 0/0:217:216,0:216:8494:0:0:0,-65.0225,-763.94 0/0:398:397,1:397:15563:1:29:0,-116.91,-1396.67 0/1:435:250,185:250:9813:185:7275:-523.481,0,-751.662 0/1:245:127,118:127:5001:118:4658:-345.399,0,-376.227 dDocent_Contig_1646 35 . C A 40.5761 . AB=0.0931677;ABP=234.468;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=874;DPB=874;DPRA=0.918197;EPP=46.4397;EPPR=1850.93;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.968273;PAO=0;PQA=0;PQR=0;PRO=0;QA=786;QR=33938;RO=851;RPL=0;RPP=46.4397;RPPR=1850.93;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=851;SRP=1850.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:136:135,0:135:5368:0:0:0,-40.639,-482.554 0/0:167:167,0:167:6696:0:0:0,-50.272,-602.325 0/0:114:109,5:109:4381:5:202:0,-15.7553,-375.658 0/1:161:145,15:145:5768:15:584:-4.37633,0,-470.382 0/0:140:140,0:140:5610:0:0:0,-42.1442,-504.706 0/0:156:155,0:155:6115:0:0:0,-46.6596,-549.678 dDocent_Contig_1647 98 . N T 370.909 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=14;CIGAR=1X;DP=14;DPB=14;DPRA=0;EPP=33.4109;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=386;QR=0;RO=0;RPL=14;RPP=33.4109;RPPR=0;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:72:-6.83672,-0.60206,0 1/1:5:0,5:0:0:5:176:-16.1854,-1.50515,0 1/1:1:0,1:0:0:1:36:-3.59827,-0.30103,0 1/1:3:0,3:0:0:3:64:-5.97167,-0.90309,0 1/1:1:0,1:0:0:1:18:-1.79997,-0.30103,0 1/1:2:0,2:0:0:2:20:-1.89999,-0.60206,0 dDocent_Contig_1649 1 . N G 77.9671 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.21888;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_1650 77 . T A 10190.3 . AB=0.560274;ABP=26.0458;AC=6;AF=0.5;AN=12;AO=409;CIGAR=1X;DP=730;DPB=730;DPRA=0;EPP=856.739;EPPR=700.053;GTI=0;LEN=1;MEANALT=1;MQM=59.687;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.987775;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13840;QR=10923;RO=321;RPL=409;RPP=891.143;RPPR=700.053;RPR=0;RUN=1;SAF=405;SAP=856.739;SAR=4;SRF=321;SRP=700.053;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:60:17,43:17:574:43:1463:-113.903,0,-33.9179 0/1:140:15,125:15:515:125:4249:-340.475,0,-4.53247 0/1:129:18,111:18:621:111:3744:-297.33,0,-17.3817 0/1:92:34,58:34:1162:58:1916:-143.914,0,-77.1898 0/1:213:165,48:165:5573:48:1637:-83.4992,0,-437.616 0/1:96:72,24:72:2478:24:831:-43.9107,0,-194.385 dDocent_Contig_1651 7 . T C 831.378 . AB=0.158645;ABP=570.802;AC=5;AF=0.416666;AN=12;AO=91;CIGAR=3X1M;DP=692;DPB=692;DPRA=0;EPP=200.614;EPPR=1127.83;GTI=0;LEN=1;MEANALT=3.16667;MQM=39.1319;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.527473;PAIREDR=0.942085;PAO=0;PQA=0;PQR=0;PRO=0;QA=2766;QR=19930;RO=518;RPL=0;RPP=200.614;RPPR=1127.83;RPR=91;RUN=1;SAF=91;SAP=200.614;SAR=0;SRF=518;SRP=1127.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:113:64,9,10,29:64:2452:9,10,29:346,386,886:-47.3395,-39.0654,-237.643,-38.6614,-212.417,-236.935,0,-173.735,-173.33,-192.532 0|1:157:119,6,14,17:119:4573:6,14,17:235,537,500:-1.68759,-19.534,-393.206,-0.265117,-357.783,-371.534,0,-357.489,-338.226,-370.337 0|1:96:64,2,11,19:64:2471:2,11,19:75,417,603:-27.1398,-41.1174,-243.49,-12.191,-209.901,-211.877,0,-197.663,-168.761,-197.231 0|1:80:60,9,1,9:60:2312:9,1,9:348,39,247:-3.64471,0,-187.226,-18.4954,-186.729,-208.117,-3.60992,-171.827,-190.308,-190.805 0|1:115:94,0,6,15:94:3619:0,6,15:0,234,461:-6.48127,-34.7781,-331.99,-19.3146,-316.538,-314.731,0,-297.204,-281.752,-292.688 0|0:131:117,0,12,2:117:4503:0,12,2:0,465,69:0,-35.2205,-405.006,-6.01241,-375.783,-372.17,-29.8827,-399.672,-370.449,-399.07 dDocent_Contig_1652 75 . A G 50.5073 . AB=0.100917;ABP=153.798;AC=1;AF=0.0833333;AN=12;AO=22;CIGAR=1X;DP=870;DPB=870;DPRA=0.75;EPP=50.7827;EPPR=1844.42;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=849;QR=32888;RO=848;RPL=22;RPP=50.7827;RPPR=1844.42;RPR=0;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=848;SRP=1844.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:109:98,11:98:3633:11:417:-5.06845,0,-294.294 0/0:162:158,4:158:5976:4:154:0,-34.5334,-523.583 0/0:152:150,2:150:5940:2:78:0,-38.3533,-527.013 0/0:99:94,5:94:3727:5:200:0,-11.4224,-317.092 0/0:156:156,0:156:6093:0:0:0,-46.9607,-548.198 0/0:192:192,0:192:7519:0:0:0,-57.7978,-676.404 dDocent_Contig_1653 32 . T A 108.734 . AB=0.162162;ABP=39.6906;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=4M1X4M;DP=210;DPB=210.667;DPRA=0.393617;EPP=16.0391;EPPR=432.962;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.929293;PAO=0;PQA=0;PQR=0;PRO=0;QA=242;QR=7716;RO=198;RPL=0;RPP=16.0391;RPPR=432.962;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=198;SRP=432.962;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:63:61,2,0:61:2358:2,0:72,0:0,-12.1285,-205.581,-18.3628,-206.183,-212.056 0|0:32:29,3,0:29:1135:3,0:115,0:-1.09177,0,-92.8119,-9.82164,-93.715,-103.153 0|0:33:33,0,0:33:1291:0,0:0,0:0,-9.93399,-116.474,-9.93399,-116.474,-116.474 0|0:45:45,0,0:45:1776:0,0:0,0:0,-13.5463,-160.076,-13.5463,-160.076,-160.076 0|1:14:12,0,2:12:453:0,2:0,81:-3.47131,-7.08367,-44.1835,0,-37.5004,-36.8983 0|1:23:18,1,4:18:703:1,4:36,161:-7.88455,-10.3741,-67.856,0,-54.8856,-56.6173 dDocent_Contig_1654 92 . A G 620.668 . AB=0.175573;ABP=242.535;AC=2;AF=0.166667;AN=12;AO=49;CIGAR=1X;DP=472;DPB=472;DPRA=3.5;EPP=109.412;EPPR=921.543;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9976;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1667;QR=14446;RO=423;RPL=49;RPP=109.412;RPPR=921.543;RPR=0;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=423;SRP=921.543;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:622:0:0:0,-5.71957,-56.2856 0/0:40:40,0:40:1397:0:0:0,-12.0412,-126.029 0/0:46:44,2:44:1495:2:69:0,-7.29472,-128.286 0/0:105:104,1:104:3553:1:30:0,-28.6086,-316.986 0/1:121:101,20:101:3480:20:673:-24.4602,0,-276.999 0/1:141:115,26:115:3899:26:895:-38.4201,0,-308.676 dDocent_Contig_1655 7 . T G 9960.52 . AB=0.0363336;ABP=2264.37;AC=0;AF=0;AN=12;AO=44;CIGAR=1X2M1X;DP=1605;DPB=1605;DPRA=0;EPP=98.5551;EPPR=2491.52;GTI=0;LEN=1;MEANALT=2.8;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.995637;PAO=0;PQA=0;PQR=0;PRO=0;QA=1525;QR=44011;RO=1146;RPL=0;RPP=98.5551;RPPR=2491.52;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=1146;SRP=2491.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:225:130,16,77:130:4992:16,77:537,3048:-211.733,-207.389,-612.344,0,-366.332,-386.635 0|0:239:109,10,117:109:4172:10,117:345,4696:-354.146,-358.938,-698.283,0,-314.364,-307.165 0|0:127:72,6,49:72:2774:6,49:230,1958:-139.597,-142.395,-368.362,0,-208.906,-213.033 0|0:204:109,7,87:109:4170:7,87:247,3489:-254.681,-267.386,-607.455,0,-322.101,-316.02 0|0:394:355,0,39:355:13655:0,39:0,1577:-23.5566,-130.422,-1251.48,0,-1121.46,-1109.72 0|0:416:371,5,39:371:14248:5,39:166,1554:-16.3357,-114.596,-1282.67,0,-1156.22,-1157.9 dDocent_Contig_1657 17 . G A 629.823 . AB=0.237705;ABP=75.9148;AC=3;AF=0.25;AN=12;AO=29;CIGAR=1X;DP=312;DPB=312;DPRA=0.642105;EPP=65.983;EPPR=617.537;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1114;QR=11183;RO=283;RPL=0;RPP=65.983;RPPR=617.537;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=283;SRP=617.537;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:24,10:24:924:10:372:-23.5892,0,-73.2233 0/1:53:44,9:44:1734:9:354:-16.2667,0,-140.333 0/1:35:25,10:25:1005:10:388:-24.7359,0,-80.2103 0/0:38:38,0:38:1504:0:0:0,-11.4391,-135.614 0/0:54:54,0:54:2114:0:0:0,-16.2556,-190.447 0/0:98:98,0:98:3902:0:0:0,-29.5009,-351.185 dDocent_Contig_1658 98 . N A 96.184 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.91202;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=103;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:103:-9.6098,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1659 16 . G T 3590.06 . AB=0.542781;ABP=8.95572;AC=6;AF=0.5;AN=12;AO=203;CIGAR=1X2M1X;DP=374;DPB=374;DPRA=0;EPP=443.819;EPPR=322.217;GTI=0;LEN=1;MEANALT=2;MQM=25.931;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=0;PAIREDR=0.85034;PAO=0;PQA=0;PQR=0;PRO=0;QA=8032;QR=5750;RO=147;RPL=0;RPP=443.819;RPPR=322.217;RPR=203;RUN=1;SAF=203;SAP=443.819;SAR=0;SRF=147;SRP=322.217;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:47:22,22,3:22:860:22,3:868,116:-38.9247,0,-64.0986,-36.5162,-61.7053,-106.377 0|1:85:30,50,5:30:1168:50,5:1943,196:-89.69,0,-80.9626,-84.2064,-81.5137,-178.738 0|1:55:12,36,7:12:473:36,7:1430,281:-69.1121,0,-28.1083,-53.0478,-19.3008,-89.8895 0|1:55:12,41,2:12:482:41,2:1626,82:-72.6354,0,-27.3689,-69.4908,-32.961,-108.642 0|1:75:35,35,5:35:1361:35,5:1409,187:-61.9268,0,-101.305,-57.197,-96.5905,-167.581 0|1:57:36,19,2:36:1406:19,2:756,82:-30.7144,0,-109.854,-35.0801,-109.113,-150.127 dDocent_Contig_1660 8 . C A 10441.4 . AB=0.244456;ABP=1102.84;AC=6;AF=0.5;AN=12;AO=474;CIGAR=1X;DP=1939;DPB=1939;DPRA=0;EPP=1032.29;EPPR=3169.02;GTI=0;LEN=1;MEANALT=1.66667;MQM=59.9325;MQMR=53.5645;NS=6;NUMALT=1;ODDS=0;PAIRED=0.99789;PAIREDR=0.962963;PAO=0;PQA=0;PQR=0;PRO=0;QA=18116;QR=55949;RO=1458;RPL=0;RPP=1032.29;RPPR=3169.02;RPR=474;RUN=1;SAF=474;SAP=1032.29;SAR=0;SRF=1458;SRP=3169.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:245:197,48:197:7579:48:1819:-90.2119,0,-591.909 0/1:360:262,94:262:10029:94:3569:-214.106,0,-763.592 0/1:233:190,42:190:7320:42:1607:-74.9894,0,-570.509 0/1:390:295,95:295:11305:95:3633:-208.757,0,-861.263 0/1:325:212,112:212:8176:112:4292:-288.547,0,-592.82 0/1:386:302,83:302:11540:83:3196:-171.526,0,-819.287 dDocent_Contig_1661 9 . T C 3761.42 . AB=0.345149;ABP=114.647;AC=6;AF=0.5;AN=12;AO=185;CIGAR=1M1X;DP=536;DPB=536;DPRA=0;EPP=404.733;EPPR=684.853;GTI=0;LEN=1;MEANALT=2.5;MQM=37.6541;MQMR=58.8344;NS=6;NUMALT=3;ODDS=0;PAIRED=0.989189;PAIREDR=0.968153;PAO=0;PQA=0;PQR=0;PRO=0;QA=7107;QR=11982;RO=314;RPL=0;RPP=404.733;RPPR=684.853;RPR=185;RUN=1;SAF=185;SAP=404.733;SAR=0;SRF=314;SRP=684.853;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:54:32,4,0,18:32:1214:4,0,18:155,0,689:-42.6195,-39.5126,-137.867,-52.2524,-139.071,-151.806,0,-86.8013,-99.5364,-94.1178 0|1:115:65,8,5,36:65:2494:8,5,36:307,189,1369:-60.9579,-55.3061,-257.681,-76.0248,-255.582,-279.28,0,-179.583,-200.284,-193.948 0|1:61:38,0,8,15:38:1453:0,8,15:0,310,578:-17.6298,-29.0689,-148.404,-21.9861,-141.309,-138.9,0,-119.433,-112.353,-114.917 0|1:131:72,0,5,54:72:2738:0,5,54:0,191,2073:-127.248,-148.922,-373.508,-144.6,-369.178,-367.672,0,-224.788,-220.465,-208.532 0|1:83:44,0,4,35:44:1690:0,4,35:0,152,1353:-87.7336,-100.979,-236.323,-97.5388,-232.871,-231.667,0,-135.545,-132.103,-125.009 0|1:92:63,1,1,27:63:2393:1,1,27:39,39,1045:-43.951,-59.7065,-243.376,-61.5144,-242.273,-245.179,0,-180.782,-182.586,-175.861 dDocent_Contig_1662 75 . T C 1433.58 . AB=0.340206;ABP=46.0368;AC=5;AF=0.416667;AN=12;AO=66;CIGAR=1X;DP=263;DPB=263;DPRA=0.562319;EPP=113.69;EPPR=430.79;GTI=0;LEN=1;MEANALT=1;MQM=59.1364;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.924242;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2265;QR=6900;RO=197;RPL=66;RPP=146.327;RPPR=430.79;RPR=0;RUN=1;SAF=62;SAP=113.69;SAR=4;SRF=197;SRP=430.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:69:69,0:69:2421:0:0:0,-20.7711,-218.149 0/1:48:26,22:26:914:22:749:-53.2771,0,-68.1272 0/1:55:44,11:44:1529:11:382:-17.6153,0,-121.343 0/1:57:38,19:38:1330:19:646:-41.3007,0,-102.842 0/1:19:7,12:7:250:12:419:-32.3249,0,-17.1272 0/1:15:13,2:13:456:2:69:-2.03721,0,-36.8587 dDocent_Contig_1663 107 . N C 399.344 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=16;CIGAR=1X;DP=16;DPB=16;DPRA=0;EPP=37.7539;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=426;QR=0;RO=0;RPL=0;RPP=37.7539;RPPR=0;RPR=16;RUN=1;SAF=0;SAP=37.7539;SAR=16;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:7:0,7:0:0:7:190:-17.3673,-2.10721,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:17:-1.69998,-0.30103,0 1/1:3:0,3:0:0:3:80:-7.46543,-0.90309,0 1/1:5:0,5:0:0:5:139:-12.7862,-1.50515,0 dDocent_Contig_1665 12 . A T 125531 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=3613;CIGAR=1X;DP=3752;DPB=3752;DPRA=0;EPP=7848.54;EPPR=300.502;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997509;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=145048;QR=5417;RO=137;RPL=0;RPP=7848.54;RPPR=300.502;RPR=3613;RUN=1;SAF=3613;SAP=7848.54;SAR=0;SRF=137;SRP=300.502;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:562:14,547:14:558:547:21902:-1918.66,-118.724,0 1/1:748:48,700:48:1901:700:28075:-2352.85,-53.8752,0 1/1:381:27,354:27:1049:354:14179:-1180.26,-19.9984,0 1/1:583:48,535:48:1909:535:21507:-1761.69,-3.482,0 1/1:854:0,853:0:0:853:34263:-3080.1,-256.779,0 1/1:624:0,624:0:0:624:25122:-2258.65,-187.843,0 dDocent_Contig_1666 15 . G A 1434.61 . AB=0.108348;ABP=2253.33;AC=2;AF=0.166667;AN=12;AO=390;CIGAR=1X;DP=4651;DPB=4651;DPRA=0;EPP=849.885;EPPR=9251.31;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998826;PAO=0;PQA=0;PQR=0;PRO=0;QA=15470;QR=170274;RO=4259;RPL=0;RPP=849.885;RPPR=9251.31;RPR=390;RUN=1;SAF=390;SAP=849.885;SAR=0;SRF=4259;SRP=9251.31;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:676:624,52:624:24979:52:2065:0,-17.4548,-2059.85 0/0:1023:944,79:944:37773:79:3120:0,-27.077,-3115.12 0/0:504:469,35:469:18727:35:1375:0,-27.7143,-1559.87 0/0:759:717,41:717:28744:41:1657:0,-78.9352,-2434.97 0/1:964:878,85:878:34945:85:3377:-13.684,0,-2851.52 0/1:725:627,98:627:25106:98:3876:-130.591,0,-2039.03 dDocent_Contig_1667 145 . G A 177.05 . AB=0.258065;ABP=18.771;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=146;DPB=146;DPRA=1.34783;EPP=20.3821;EPPR=302.673;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.625;PAIREDR=0.746377;PAO=0;PQA=0;PQR=0;PRO=0;QA=300;QR=5255;RO=138;RPL=8;RPP=20.3821;RPPR=302.673;RPR=0;RUN=1;SAF=0;SAP=20.3821;SAR=8;SRF=0;SRP=302.673;SRR=138;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:753:0:0:0,-6.0206,-68.0902 0/0:26:26,0:26:994:0:0:0,-7.82678,-89.7697 0/0:11:11,0:11:427:0:0:0,-3.31133,-38.7846 0/0:35:35,0:35:1336:0:0:0,-10.536,-120.517 0/0:23:23,0:23:869:0:0:0,-6.92369,-78.5211 0/1:31:23,8:23:876:8:300:-18.0237,0,-69.8277 dDocent_Contig_1668 1 . N G 150.627 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=4.60517;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=163;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:163:-15.0584,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1669 41 . T C 50.8647 . AB=0.102941;ABP=96.1281;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=406;DPB=406;DPRA=1;EPP=35.5824;EPPR=852.056;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.969309;PAO=0;PQA=0;PQR=0;PRO=0;QA=607;QR=14398;RO=391;RPL=0;RPP=35.5824;RPPR=852.056;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=391;SRP=852.056;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:68:61,7:61:2222:7:280:-5.09992,0,-179.731 0/0:71:68,3:68:2445:3:122:0,-10.0006,-208.889 0/0:64:59,5:59:2211:5:205:0,-0.43091,-180.383 0/0:73:73,0:73:2684:0:0:0,-21.9752,-241.765 0/0:76:76,0:76:2866:0:0:0,-22.8783,-258.111 0/0:54:54,0:54:1970:0:0:0,-16.2556,-177.547 dDocent_Contig_1670 35 . G A 551.717 . AB=0.0957372;ABP=2034.34;AC=4;AF=0.333333;AN=12;AO=198;CIGAR=1X;DP=2409;DPB=2409;DPRA=0;EPP=432.962;EPPR=4801.96;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.994949;PAIREDR=0.991855;PAO=0;PQA=0;PQR=0;PRO=0;QA=7800;QR=85957;RO=2210;RPL=0;RPP=432.962;RPPR=4801.96;RPR=198;RUN=1;SAF=198;SAP=432.962;SAR=0;SRF=2210;SRP=4801.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:387:347,40:347:13599:40:1601:-27.8292,0,-1106.55 0/1:431:389,42:389:15091:42:1655:-19.4459,0,-1227.47 0/1:232:210,22:210:8090:22:876:-9.31086,0,-657.9 0/1:381:347,33:347:13389:33:1283:-0.942386,0,-1089.4 0/0:569:541,28:541:21047:28:1090:0,-72.8919,-1794.29 0/0:409:376,33:376:14741:33:1295:0,-6.30347,-1208.86 dDocent_Contig_1671 10 . C T 253.716 . AB=0.125;ABP=61.6401;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X1M1X;DP=545;DPB=545;DPRA=0.621019;EPP=18.2106;EPPR=1106.12;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.998031;PAO=0;PQA=0;PQR=0;PRO=0;QA=279;QR=19710;RO=508;RPL=0;RPP=18.2106;RPPR=1106.12;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=508;SRP=1106.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:82:76,1,5:76:2960:1,5:39,199:0,-19.6737,-262.642,-6.48696,-246.558,-248.258 0|0:72:69,0,2:69:2672:0,2:0,82:0,-20.7711,-240.325,-13.8366,-233.557,-232.954 0|1:48:37,6,5:37:1434:6,5:240,199:-8.6329,0,-115.99,-3.38718,-101.41,-119.677 0|0:101:88,0,13:88:3415:0,13:0,529:-17.5522,-44.0429,-324.605,0,-280.966,-277.052 0|0:133:133,0,0:133:5145:0,0:0,0:0,-40.037,-463.018,-40.037,-463.018,-463.018 0|0:109:105,0,3:105:4084:0,3:0,122:0,-31.6081,-367.208,-21.5474,-357.144,-356.241 dDocent_Contig_1672 9 . C T 52.7681 . AB=0.137931;ABP=36.0317;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=215;DPB=215;DPRA=1.47126;EPP=16.0391;EPPR=313.967;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.564593;PAO=0;PQA=0;PQR=0;PRO=0;QA=233;QR=7895;RO=209;RPL=0;RPP=16.0391;RPPR=456.848;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=191;SRP=313.967;SRR=18;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:981:0:0:0,-8.12781,-88.5846 0/0:55:54,1:54:2030:1:39:0,-12.6601,-179.042 0/1:29:25,4:25:954:4:155:-5.59557,0,-77.4442 0/0:44:43,1:43:1631:1:39:0,-9.34875,-143.153 0/0:34:34,0:34:1301:0:0:0,-10.235,-117.377 0/0:26:26,0:26:998:0:0:0,-7.82678,-90.1304 dDocent_Contig_1673 45 . A G 1415.34 . AB=0.12069;ABP=1307.69;AC=2;AF=0.166667;AN=12;AO=226;CIGAR=1X;DP=2520;DPB=2520;DPRA=0;EPP=379.694;EPPR=1497.59;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.982301;PAIREDR=0.998691;PAO=0;PQA=0;PQR=0;PRO=0;QA=9032;QR=90244;RO=2292;RPL=14;RPP=379.694;RPPR=1497.59;RPR=212;RUN=1;SAF=226;SAP=493.763;SAR=0;SRF=2292;SRP=4980.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:251:231,20:231:9098:20:791:0,-4.05212,-746.819 0/0:438:403,35:403:15839:35:1383:0,-7.13388,-1299.63 0/1:558:497,60:497:19643:60:2425:-50.6226,0,-1598.53 0/0:290:271,19:271:10686:19:748:0,-19.6619,-893.446 0/0:497:471,26:471:18537:26:1044:0,-55.3602,-1572.64 0/1:486:419,66:419:16441:66:2641:-91.7251,0,-1332.41 dDocent_Contig_1674 39 . C A 956.364 . AB=0.147806;ABP=469.526;AC=1;AF=0.0833333;AN=12;AO=64;CIGAR=1X;DP=1339;DPB=1339;DPRA=2.38962;EPP=141.985;EPPR=2769.47;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2514;QR=50541;RO=1274;RPL=0;RPP=141.985;RPPR=2769.47;RPR=64;RUN=1;SAF=64;SAP=141.985;SAR=0;SRF=1274;SRP=2769.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:67:67,0:67:2676:0:0:0,-20.169,-240.962 0/0:119:119,0:119:4724:0:0:0,-35.8226,-425.087 0/0:122:122,0:122:4829:0:0:0,-36.7257,-434.512 0/0:178:178,0:178:7030:0:0:0,-53.5833,-632.405 0/1:433:368,64:368:14641:64:2514:-95.9552,0,-1186.15 0/0:420:420,0:420:16641:0:0:0,-126.433,-1496.4 dDocent_Contig_1675 48 . G T 1805.62 . AB=0.136456;ABP=1130.31;AC=4;AF=0.333333;AN=12;AO=134;CIGAR=1X;DP=1357;DPB=1357;DPRA=1.30933;EPP=293.988;EPPR=2656.55;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997545;PAO=0;PQA=0;PQR=0;PRO=0;QA=5306;QR=47339;RO=1222;RPL=0;RPP=293.988;RPPR=2656.55;RPR=134;RUN=1;SAF=134;SAP=293.988;SAR=0;SRF=1222;SRP=2656.55;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:266:228,38:228:8724:38:1521:-57.0595,0,-704.652 0/1:315:262,53:262:10207:53:2112:-95.4373,0,-823.236 0/1:186:169,17:169:6581:17:660:-3.73141,0,-536.061 0/1:215:189,26:189:7330:26:1013:-26.7388,0,-594.687 0/0:154:154,0:154:6012:0:0:0,-46.3586,-540.91 0/0:221:220,0:220:8485:0:0:0,-66.2266,-762.824 dDocent_Contig_1676 187 . T A 117.964 . AB=0.117021;ABP=122.765;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=219;DPB=219;DPRA=2.23333;EPP=37.7539;EPPR=443.819;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=643;QR=8115;RO=203;RPL=16;RPP=37.7539;RPPR=443.819;RPR=0;RUN=1;SAF=0;SAP=37.7539;SAR=16;SRF=0;SRP=443.819;SRR=203;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:13:11,2:11:433:2:82:-3.86629,0,-35.4062 0/0:35:33,2:33:1319:2:82:0,-2.75637,-111.194 0/0:26:24,2:24:961:2:75:0,-0.706436,-79.6677 0/0:18:18,0:18:720:0:0:0,-5.41854,-65.1254 0/1:81:72,9:72:2886:9:364:-8.74132,0,-235.46 0/0:46:45,1:45:1796:1:40:0,-9.8517,-157.848 dDocent_Contig_1677 40 . A C 10011.2 . AB=0.671548;ABP=125.194;AC=6;AF=0.5;AN=12;AO=321;CIGAR=1X;DP=478;DPB=478;DPRA=0;EPP=700.053;EPPR=343.931;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.975078;PAIREDR=0.968153;PAO=0;PQA=0;PQR=0;PRO=0;QA=12755;QR=6203;RO=157;RPL=0;RPP=700.053;RPPR=343.931;RPR=321;RUN=1;SAF=321;SAP=700.053;SAR=0;SRF=157;SRP=343.931;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:77:14,63:14:546:63:2497:-201.695,0,-26.2945 0/1:94:15,79:15:583:79:3149:-255.177,0,-24.512 0/1:56:5,51:5:201:51:1999:-163.236,0,-1.61284 0/1:80:24,56:24:942:56:2234:-177.141,0,-60.9927 0/1:74:44,30:44:1751:30:1214:-87.2544,0,-135.537 0/1:97:55,42:55:2180:42:1662:-120.602,0,-167.182 dDocent_Contig_1678 16 . G T 5591.23 . AB=0.210043;ABP=1195.54;AC=3;AF=0.25;AN=12;AO=375;CIGAR=1X;DP=3072;DPB=3072;DPRA=0.960076;EPP=817.312;EPPR=5857.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=12772;QR=107110;RO=2696;RPL=0;RPP=817.312;RPPR=5857.3;RPR=375;RUN=1;SAF=375;SAP=817.312;SAR=0;SRF=2696;SRP=5857.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:387:355,32:355:14035:32:1086:0,-18.4611,-1164.08 0/1:633:506,127:506:20133:127:4335:-199.775,0,-1619.75 0/1:384:309,75:309:12326:75:2557:-114.772,0,-992.859 0/1:616:475,141:475:18890:141:4794:-246.185,0,-1513.11 0/0:544:543,0:543:21576:0:0:0,-163.459,-1939.68 0/0:508:508,0:508:20150:0:0:0,-152.923,-1811.82 dDocent_Contig_1679 7 . T A 56.697 . AB=0.137931;ABP=36.0317;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=232;DPB=232;DPRA=0.974359;EPP=18.2106;EPPR=491.592;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=58.0667;NS=6;NUMALT=1;ODDS=0;PAIRED=0.857143;PAIREDR=0.915556;PAO=0;PQA=0;PQR=0;PRO=0;QA=273;QR=8617;RO=225;RPL=0;RPP=18.2106;RPPR=491.592;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=225;SRP=491.592;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:29:25,4:25:953:4:156:-5.68742,0,-77.3525 0/0:45:45,0:45:1720:0:0:0,-13.5463,-151.129 0/0:47:44,3:44:1683:3:117:0,-3.23803,-131.3 0/0:25:25,0:25:955:0:0:0,-7.52575,-84.5453 0/0:40:40,0:40:1541:0:0:0,-12.0412,-138.962 0/0:46:46,0:46:1765:0:0:0,-13.8474,-157.39 dDocent_Contig_1680 98 . N T 236.481 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=246;QR=0;RO=0;RPL=7;RPP=18.2106;RPPR=0;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:145:-13.4057,-1.20412,0 1/1:2:0,2:0:0:2:70:-6.64733,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_1681 32 . A G 1639.07 . AB=0.103448;ABP=82.2316;AC=0;AF=0;AN=12;AO=6;CIGAR=1X2M1X;DP=592;DPB=592;DPRA=0.659091;EPP=16.0391;EPPR=1077.89;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.99798;PAO=0;PQA=0;PQR=0;PRO=0;QA=230;QR=19621;RO=495;RPL=0;RPP=16.0391;RPPR=1077.89;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=495;SRP=1077.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:88:78,0,10:78:3097:0,10:0,402:-10.0489,-33.5292,-288.469,0,-255.34,-252.33 0|0:88:86,0,2:86:3414:0,2:0,82:0,-25.8886,-306.915,-18.711,-300.147,-299.545 0|0:58:45,6,6:45:1793:6,6:230,234:-5.68843,-0.361355,-146.206,0,-128.78,-145.849 0|0:89:77,0,12:77:3026:0,12:0,484:-17.1194,-40.2987,-289.166,0,-249.269,-245.657 0|0:100:72,0,28:72:2866:0,28:0,1096:-68.8209,-90.495,-326.485,0,-236.382,-227.954 0|0:169:137,0,32:137:5425:0,32:0,1289:-65.4004,-106.641,-553.114,0,-446.873,-437.241 dDocent_Contig_1682 92 . G A 336.318 . AB=0.261538;ABP=35.1147;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=376;DPB=376;DPRA=0.686099;EPP=46.4397;EPPR=776.054;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.95;PAIREDR=0.918539;PAO=0;PQA=0;PQR=0;PRO=0;QA=695;QR=12124;RO=356;RPL=20;RPP=46.4397;RPPR=776.054;RPR=0;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=356;SRP=776.054;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:45:44,1:44:1513:1:35:0,-10.0477,-132.966 0/0:78:78,0:78:2670:0:0:0,-23.4803,-240.557 0/0:69:69,0:69:2371:0:0:0,-20.7711,-213.656 0/0:76:76,0:76:2567:0:0:0,-22.8783,-231.288 0/0:43:41,2:41:1392:2:69:0,-6.39163,-119.023 0/1:65:48,17:48:1611:17:591:-33.9506,0,-125.708 dDocent_Contig_1683 10 . A C 13689.8 . AB=0.0541796;ABP=1118.25;AC=7;AF=0.583333;AN=12;AO=35;CIGAR=1X3M2X;DP=739;DPB=739;DPRA=1.38925;EPP=79.0118;EPPR=309.188;GTI=0;LEN=1;MEANALT=2.6;MQM=25.1429;MQMR=60;NS=6;NUMALT=2;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1381;QR=5556;RO=141;RPL=0;RPP=79.0118;RPPR=309.188;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=141;SRP=309.188;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:114:16,89,9:16:630:89,9:2816,353:-197.483,0,-25.2236,-197.111,-46.9162,-246.244 0|1:167:31,123,12:31:1230:123,12:4249,474:-304.744,0,-64.4015,-302.196,-89.5998,-399.848 0|1:90:25,61,4:25:975:61,4:2122,157:-150.416,0,-62.0571,-157.003,-79.5101,-235.955 0|1:163:49,105,9:49:1930:105,9:3566,356:-246.259,0,-127.194,-234.879,-132.682,-390.967 1|1:93:0,92,0:0:0:92,0:3180,0:-266.285,-27.6948,0,-266.285,-27.6948,-266.285 0|1:112:20,86,1:20:791:86,1:2896,41:-206.991,0,-39.2412,-209.652,-61.7698,-274.461 dDocent_Contig_1684 22 . T G 2766.26 . AB=0.221441;ABP=386.506;AC=5;AF=0.416667;AN=12;AO=129;CIGAR=1X;DP=631;DPB=631;DPRA=0;EPP=283.13;EPPR=1093.09;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5116;QR=19816;RO=502;RPL=0;RPP=283.13;RPPR=1093.09;RPR=129;RUN=1;SAF=129;SAP=283.13;SAR=0;SRF=502;SRP=1093.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:62:59,3:59:2357:3:120:0,-7.47596,-201.104 0/1:164:148,16:148:5820:16:609:-5.76429,0,-474.27 0/1:200:152,48:152:6017:48:1917:-112.53,0,-481.117 0/1:96:77,19:77:3039:19:745:-38.4733,0,-244.704 0/1:69:47,22:47:1843:22:879:-58.6472,0,-145.319 0/1:40:19,21:19:740:21:846:-64.412,0,-54.8811 dDocent_Contig_1685 98 . N T 936.482 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=32;CIGAR=1X;DP=32;DPB=32;DPRA=0;EPP=72.4974;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1020;QR=0;RO=0;RPL=32;RPP=72.4974;RPPR=0;RPR=0;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:14:0,14:0:0:14:457:-41.4443,-4.21442,0 1/1:10:0,10:0:0:10:317:-28.8393,-3.0103,0 1/1:7:0,7:0:0:7:226:-20.6578,-2.10721,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:20:-1.99996,-0.30103,0 dDocent_Contig_1686 28 . C T 78.537 . AB=0.151515;ABP=37.8197;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=187;DPB=187;DPRA=1.07143;EPP=13.8677;EPPR=398.218;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.945055;PAO=0;PQA=0;PQR=0;PRO=0;QA=197;QR=7172;RO=182;RPL=0;RPP=13.8677;RPPR=398.218;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=182;SRP=398.218;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:275:0:0:0,-2.10721,-25.1179 0/0:26:26,0:26:1031:0:0:0,-7.82678,-93.0794 0/0:46:46,0:46:1781:0:0:0,-13.8474,-160.494 0/0:28:28,0:28:1118:0:0:0,-8.42884,-100.907 0/0:47:47,0:47:1850:0:0:0,-14.1484,-166.704 0/1:33:28,5:28:1117:5:197:-8.17237,0,-90.8804 dDocent_Contig_1687 13 . T A 9361.63 . AB=0.205938;ABP=1596.83;AC=4;AF=0.333333;AN=12;AO=461;CIGAR=1X;DP=2509;DPB=2509;DPRA=0;EPP=1004.06;EPPR=4450.19;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998535;PAO=0;PQA=0;PQR=0;PRO=0;QA=18465;QR=81843;RO=2048;RPL=0;RPP=1004.06;RPPR=4450.19;RPR=461;RUN=1;SAF=461;SAP=1004.06;SAR=0;SRF=2048;SRP=4450.19;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:232:204,28:204:8152:28:1120:-31.2443,0,-663.378 0/1:348:277,71:277:11058:71:2847:-151.569,0,-889.696 0/0:147:137,10:137:5468:10:391:0,-8.70935,-456.395 0/0:240:226,14:226:9071:14:545:0,-22.8583,-766.444 0/1:860:658,202:658:26303:202:8107:-470.28,0,-2106.01 0/1:682:546,136:546:21791:136:5455:-285.475,0,-1754.01 dDocent_Contig_1688 98 . N A 1225.71 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=41;CIGAR=1X;DP=42;DPB=42;DPRA=0;EPP=92.0407;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.560976;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1334;QR=0;RO=0;RPL=41;RPP=92.0407;RPPR=0;RPR=0;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:128:-11.8361,-1.20412,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:2:0,2:0:0:2:52:-4.93868,-0.60206,0 1/1:15:0,15:0:0:15:513:-46.4957,-4.51545,0 1/1:16:0,16:0:0:16:504:-45.6605,-4.81648,0 1/1:3:0,2:0:0:2:67:-6.20475,-0.60206,0 dDocent_Contig_1689 19 . T G 2156.74 . AB=0.240106;ABP=225.366;AC=5;AF=0.416667;AN=12;AO=94;CIGAR=3M2X3M;DP=429;DPB=427.75;DPRA=0;EPP=207.129;EPPR=624.051;GTI=0;LEN=1;MEANALT=4;MQM=59.3617;MQMR=56.6399;NS=6;NUMALT=6;ODDS=0;PAIRED=0.776596;PAIREDR=0.755245;PAO=0;PQA=0;PQR=0;PRO=0;QA=3681;QR=11162;RO=286;RPL=0;RPP=207.129;RPPR=624.051;RPR=94;RUN=1;SAF=94;SAP=207.129;SAR=0;SRF=286;SRP=624.051;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:60:41,0,15,0,3,0,0:41:1598:0,15,0,3,0,0:0,591,0,122,0,0:-36.3266,-48.6688,-168.984,0,-120.356,-115.84,-48.6688,-168.984,-120.356,-168.984,-38.6408,-158.959,-110.329,-158.959,-158.056,-48.6688,-168.984,-120.356,-168.984,-158.959,-168.984,-48.6688,-168.984,-120.356,-168.984,-158.959,-168.984,-168.984 0|1:111:69,6,33,0,2,0,1:69:2710:6,33,0,2,0,1:243,1294,0,79,0,20:-85.6383,-86.3692,-302.502,0,-197.908,-208.013,-106.409,-304.308,-217.947,-324.346,-99.93,-297.829,-211.467,-317.867,-317.265,-106.409,-304.308,-217.947,-324.346,-317.867,-324.346,-105.185,-303.08,-216.72,-323.118,-316.639,-323.118,-322.817 0|1:64:46,0,10,5,2,0,0:46:1793:0,10,5,2,0,0:0,397,197,81,0,0:-18.9114,-32.7587,-174.486,0,-141.798,-138.788,-23.3389,-165.042,-132.355,-163.536,-26.0967,-167.832,-135.143,-158.387,-167.23,-32.7587,-174.486,-141.798,-165.042,-167.832,-174.486,-32.7587,-174.486,-141.798,-165.042,-167.832,-174.486,-174.486 0|1:75:44,0,27,0,0,1,1:44:1714:0,27,0,0,1,1:0,1047,0,0,40,23:-72.0747,-85.3201,-220.063,0,-134.811,-126.683,-85.3201,-220.063,-134.811,-220.063,-85.3201,-220.063,-134.811,-220.063,-220.063,-82.0241,-216.768,-131.515,-216.768,-216.768,-216.467,-83.8268,-218.567,-133.315,-218.567,-218.567,-215.271,-218.266 0|0:50:42,0,3,0,1,0,4:42:1638:0,3,0,1,0,4:0,119,0,41,0,88:0,-12.6433,-128.867,-2.78634,-119.067,-118.164,-12.6433,-128.867,-119.067,-128.867,-9.2428,-125.482,-115.681,-125.482,-125.181,-12.6433,-128.867,-119.067,-128.867,-125.482,-128.867,-7.11078,-123.242,-113.443,-123.242,-119.857,-123.242,-122.038 0|1:69:44,0,6,0,4,4,8:44:1709:0,6,0,4,4,8:0,233,0,164,163,167:-5.92408,-19.1694,-159.267,0,-140.121,-138.314,-19.1694,-159.267,-140.121,-159.267,-5.67078,-145.785,-126.638,-145.785,-144.581,-5.70306,-145.817,-126.67,-145.817,-132.334,-144.613,-8.75863,-148.82,-129.675,-148.82,-135.338,-135.371,-146.411 dDocent_Contig_1690 26 . T A 4501.63 . AB=0.433333;ABP=16.9077;AC=6;AF=0.5;AN=12;AO=156;CIGAR=1X;DP=360;DPB=360;DPRA=0;EPP=341.76;EPPR=445.991;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.871795;PAIREDR=0.730392;PAO=0;PQA=0;PQR=0;PRO=0;QA=6231;QR=8170;RO=204;RPL=0;RPP=341.76;RPPR=445.991;RPR=156;RUN=1;SAF=156;SAP=341.76;SAR=0;SRF=204;SRP=445.991;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:48:25,23:25:1016:23:918:-68.475,0,-77.2827 0/1:74:40,34:40:1595:34:1362:-100.561,0,-121.504 0/1:60:32,28:32:1272:28:1127:-83.645,0,-96.6828 0/1:57:30,27:30:1213:27:1051:-77.7165,0,-92.2801 0/1:61:30,31:30:1194:31:1247:-94.137,0,-89.3712 0/1:60:47,13:47:1880:13:526:-29.625,0,-151.341 dDocent_Contig_1691 30 . A G 1617.47 . AB=0.329787;ABP=50.3207;AC=6;AF=0.5;AN=12;AO=62;CIGAR=2X1M1X;DP=188;DPB=187.75;DPRA=0;EPP=137.642;EPPR=274.444;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.629032;PAIREDR=0.52;PAO=0;PQA=0;PQR=0;PRO=0;QA=2447;QR=4881;RO=125;RPL=0;RPP=137.642;RPPR=274.444;RPR=62;RUN=1;SAF=62;SAP=137.642;SAR=0;SRF=125;SRP=274.444;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:31:16,15:16:620:15:569:-42.2059,0,-46.7965 0|1:33:23,10:23:909:10:395:-25.9734,0,-72.1871 0|1:22:12,9:12:475:9:360:-26.1127,0,-36.4549 0|1:30:19,11:19:727:11:443:-31.1954,0,-56.7218 0|1:42:34,8:34:1335:8:317:-16.2526,0,-107.776 0|1:30:21,9:21:815:9:363:-24.0038,0,-64.6358 dDocent_Contig_1692 26 . A C 42186.2 . AB=0.159407;ABP=2177.4;AC=1;AF=0.0833333;AN=12;AO=344;CIGAR=1X3M2I6M1X4M1X;DP=5337;DPB=5886.12;DPRA=0;EPP=749.997;EPPR=2652.21;GTI=0;LEN=1;MEANALT=33;MQM=60;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=1;PAIREDR=0.998361;PAO=0;PQA=0;PQR=0;PRO=0;QA=12733;QR=47723;RO=1220;RPL=0;RPP=749.997;RPPR=2652.21;RPR=344;RUN=1;SAF=344;SAP=749.997;SAR=0;SRF=1220;SRP=2652.21;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:700:164,0,61,18,0,31,204,68,68,14:164:6435:0,61,18,0,31,204,68,68,14:0,2231,708,0,1158,7417,2573,2260,381:-556.229,-605.598,-1134.82,-423.318,-952.542,-934.179,-547.364,-1076.59,-894.308,-1071.17,-605.598,-1134.82,-952.542,-1076.59,-1134.82,-510.795,-1040.02,-857.74,-981.784,-1040.02,-1030.69,0,-529.226,-346.948,-470.992,-529.226,-434.425,-467.816,-394.699,-923.923,-741.644,-865.689,-923.923,-829.121,-318.329,-903.453,-422.769,-951.991,-769.713,-893.758,-951.991,-857.19,-346.4,-741.094,-931.521,-575.532,-1104.75,-922.475,-1046.52,-1104.75,-1009.95,-499.161,-893.856,-921.925,-1100.54 0|0:965:228,50,65,62,0,41,262,91,138,4:228:8894:50,65,62,0,41,262,91,138,4:1929,2441,2422,0,1523,9344,3375,4651,87:-692.838,-603.071,-1319.09,-561.523,-1134.19,-1273.02,-562.386,-1135.05,-1093.51,-1274.79,-761.473,-1334.14,-1292.59,-1293.45,-1492.54,-636.865,-1209.53,-1167.98,-1168.85,-1367.93,-1355.59,0,-572.668,-531.12,-531.983,-731.069,-606.462,-652.199,-485.359,-1058.03,-1016.48,-1017.34,-1216.43,-1091.82,-454.957,-1189.03,-384.64,-957.305,-915.758,-916.621,-1115.71,-991.099,-354.239,-839.594,-1074.16,-754.85,-1327.52,-1285.97,-1286.83,-1485.92,-1361.31,-724.446,-1209.8,-1109.08,-1484.71 0|0:671:207,25,52,0,0,61,223,24,50,14:207:8125:25,52,0,0,61,223,24,50,14:976,1966,0,0,2167,8097,885,1725,486:-598.705,-580.786,-1241.48,-499.871,-1087.86,-1152.44,-661.018,-1249.01,-1168.1,-1329.24,-661.018,-1249.01,-1168.1,-1329.24,-1329.24,-484.516,-1072.51,-991.595,-1152.74,-1152.74,-1134.38,0,-587.998,-507.084,-668.229,-668.229,-491.73,-601.099,-588.657,-1176.65,-1095.74,-1256.88,-1256.88,-1080.38,-595.868,-1249.66,-520.911,-1108.9,-1027.99,-1189.13,-1189.13,-1012.63,-528.124,-1116.77,-1174.08,-621.511,-1209.5,-1128.59,-1289.73,-1289.73,-1113.23,-628.723,-1217.37,-1149.63,-1285.52 0|0:843:251,26,24,67,0,55,207,107,26,1:251:9845:26,24,67,0,55,207,107,26,1:1020,909,2631,0,2073,7370,3985,879,13:-524.954,-516.631,-1318.43,-525.996,-1251.74,-1328.4,-384.136,-1109.88,-1119.25,-1173.59,-600.513,-1326.26,-1335.62,-1193.76,-1410.14,-430.662,-1156.41,-1165.77,-1023.91,-1240.29,-1223.73,0,-725.743,-735.109,-593.25,-809.625,-639.776,-747.312,-274.376,-1000.12,-1009.49,-867.627,-1084,-914.152,-483.491,-1051.79,-529.271,-1255.01,-1264.38,-1122.52,-1338.9,-1169.05,-738.384,-1012.76,-1331.07,-599.644,-1325.39,-1334.75,-1192.89,-1409.27,-1239.42,-808.756,-1083.13,-1338.03,-1408.97 0|0:1154:223,0,1,13,161,115,305,1,128,160:223:8714:0,1,13,161,115,305,1,128,160:0,24,515,5876,4315,11002,40,4172,4861:-830.502,-897.631,-1614.01,-895.773,-1612.15,-1611.85,-855.243,-1571.63,-1569.77,-1567.71,-417.669,-1134.05,-1132.19,-1091.67,-1085.59,-544.242,-1260.63,-1258.77,-1218.24,-780.665,-1226.01,0,-716.387,-714.529,-673.999,-236.426,-362.999,-624.573,-894.336,-1610.72,-1608.86,-1568.33,-1130.76,-1257.33,-713.092,-1610.42,-560.878,-1277.26,-1275.4,-1234.87,-797.3,-923.873,-379.635,-1273.96,-1238.73,-508.455,-1224.84,-1222.98,-1182.45,-744.878,-871.45,-327.213,-1221.54,-888.085,-1176.67 1|0:1004:147,32,0,42,183,3,174,0,359,29:147:5710:32,0,42,183,3,174,0,359,29:1207,0,1685,6857,113,6278,0,11999,888:-1019.39,-964.734,-1424.27,-1063.64,-1433.9,-1532.81,-924.803,-1295.07,-1393.97,-1381.33,-502.113,-872.378,-971.282,-832.447,-916.194,-1054.38,-1424.64,-1523.55,-1384.71,-962.023,-1522.64,-551.429,-921.693,-1020.6,-881.762,-459.073,-1011.34,-968.218,-1063.64,-1433.9,-1532.81,-1393.97,-971.282,-1523.55,-1020.6,-1532.81,-92.3541,-462.618,-561.521,-422.686,0,-552.262,-49.3171,-561.521,-453.452,-992.479,-1362.74,-1461.65,-1322.81,-900.123,-1452.39,-949.438,-1461.65,-490.364,-1452.92 dDocent_Contig_1695 124 . G A 912.151 . AB=0.296053;ABP=57.9257;AC=5;AF=0.416667;AN=12;AO=47;CIGAR=1X;DP=191;DPB=191;DPRA=0;EPP=105.07;EPPR=315.702;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.87234;PAIREDR=0.763889;PAO=0;PQA=0;PQR=0;PRO=0;QA=1610;QR=4905;RO=144;RPL=0;RPP=105.07;RPPR=315.702;RPR=47;RUN=1;SAF=0;SAP=105.07;SAR=47;SRF=0;SRP=315.702;SRR=144;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:21,7:21:720:7:238:-13.3235,0,-56.6896 0/0:39:37,2:37:1266:2:71:0,-4.99811,-107.499 0/1:38:32,6:32:1099:6:205:-7.34606,0,-87.7764 0/1:19:15,4:15:475:4:139:-7.13305,0,-37.333 0/1:33:18,15:18:602:15:512:-36.4711,0,-44.5606 0/1:34:21,13:21:743:13:445:-30.1428,0,-56.9592 dDocent_Contig_1697 7 . T A 594.097 . AB=0.139881;ABP=381.493;AC=3;AF=0.25;AN=12;AO=54;CIGAR=1X;DP=1074;DPB=1074;DPRA=0.458929;EPP=120.27;EPPR=2213.57;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=59.9676;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2059;QR=38821;RO=1018;RPL=0;RPP=120.27;RPPR=2213.57;RPR=54;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=1018;SRP=2213.57;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:107:90,16:90:3392:16:605:-22.5262,0,-273.157 0/0:178:171,7:171:6501:7:268:0,-29.0995,-560.526 0/1:99:90,9:90:3471:9:350:-2.05939,0,-282.714 0/1:130:108,22:108:4133:22:836:-36.4296,0,-332.923 0/0:306:305,0:305:11625:0:0:0,-91.8141,-1045.65 0/0:254:254,0:254:9699:0:0:0,-76.4616,-872.573 dDocent_Contig_1698 83 . C T 125.288 . AB=0.112426;ABP=444.012;AC=1;AF=0.0833333;AN=12;AO=54;CIGAR=1X;DP=784;DPB=784;DPRA=5.15982;EPP=120.27;EPPR=1588.19;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1830;QR=24810;RO=730;RPL=54;RPP=120.27;RPPR=1588.19;RPR=0;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=730;SRP=1588.19;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:61:61,0:61:2085:0:0:0,-18.3628,-187.924 0/0:44:44,0:44:1507:0:0:0,-13.2453,-135.922 0/0:27:27,0:27:932:0:0:0,-8.12781,-84.1942 0/0:87:87,0:87:2965:0:0:0,-26.1896,-267.095 0/1:338:300,38:300:10130:38:1270:-12.8476,0,-809.966 0/0:227:211,16:211:7191:16:560:0,-17.6037,-596.567 dDocent_Contig_1699 13 . T C 698.115 . AB=0.320988;ABP=25.5561;AC=2;AF=0.166667;AN=12;AO=26;CIGAR=1X;DP=166;DPB=166;DPRA=1.90588;EPP=59.4686;EPPR=307.016;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.95;PAO=0;PQA=0;PQR=0;PRO=0;QA=1048;QR=5594;RO=140;RPL=0;RPP=59.4686;RPPR=307.016;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=140;SRP=307.016;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:539:0:0:0,-4.21442,-48.8429 0/0:29:29,0:29:1163:0:0:0,-8.72987,-104.95 0/0:18:18,0:18:734:0:0:0,-5.41854,-66.3827 0/0:24:24,0:24:966:0:0:0,-7.22472,-87.241 0/1:33:24,9:24:959:9:358:-22.6462,0,-76.6723 0/1:48:31,17:31:1233:17:690:-47.9788,0,-96.7844 dDocent_Contig_1700 95 . C G 498.55 . AB=0.179688;ABP=231.151;AC=3;AF=0.25;AN=12;AO=55;CIGAR=1X;DP=582;DPB=582;DPRA=1.06522;EPP=122.441;EPPR=1147.38;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1696;QR=17716;RO=527;RPL=55;RPP=122.441;RPPR=1147.38;RPR=0;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=527;SRP=1147.38;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:116:115,1:115:3749:1:25:0,-32.4196,-335.128 0/0:118:110,8:110:3701:8:253:0,-12.4411,-310.236 0/1:149:127,22:127:4300:22:677:-16.3702,0,-342.355 0/1:64:46,18:46:1563:18:545:-30.0765,0,-121.695 0/1:43:37,6:37:1226:6:196:-5.01775,0,-97.6909 0/0:92:92,0:92:3177:0:0:0,-27.6948,-286.168 dDocent_Contig_1701 13 . A T 10551.2 . AB=0.648649;ABP=102.429;AC=6;AF=0.5;AN=12;AO=336;CIGAR=1X;DP=518;DPB=518;DPRA=0;EPP=732.625;EPPR=398.218;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.979167;PAIREDR=0.917582;PAO=0;PQA=0;PQR=0;PRO=0;QA=13490;QR=7261;RO=182;RPL=0;RPP=732.625;RPPR=398.218;RPR=336;RUN=1;SAF=336;SAP=732.625;SAR=0;SRF=182;SRP=398.218;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:69:21,48:21:820:48:1953:-155.184,0,-53.3422 0/1:110:24,86:24:957:86:3469:-279.121,0,-53.32 0/1:86:12,74:12:486:74:2978:-242.206,0,-18.2027 0/1:99:30,69:30:1190:69:2771:-219.696,0,-77.5734 0/1:68:49,19:49:1958:19:759:-48.1612,0,-155.947 0/1:86:46,40:46:1850:40:1560:-114.747,0,-140.816 dDocent_Contig_1702 24 . A G 3013.18 . AB=0.0393701;ABP=237.068;AC=0;AF=0;AN=12;AO=5;CIGAR=1X2M1X;DP=370;DPB=370;DPRA=0.992188;EPP=13.8677;EPPR=545.878;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.488;PAO=0;PQA=0;PQR=0;PRO=0;QA=198;QR=9890;RO=250;RPL=0;RPP=13.8677;RPPR=545.878;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=250;SRP=545.878;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:44:16,3,25:16:629:3,25:118,992:-76.8431,-71.9531,-122.787,0,-42.0314,-44.2125 0|0:83:57,2,24:57:2256:2,24:80,968:-62.6367,-73.2055,-258.269,0,-179.077,-178.443 0|0:49:24,0,25:24:955:0,25:0,1009:-76.353,-83.5777,-162.208,0,-79.03,-71.5043 0|0:81:58,0,23:58:2289:0,23:0,891:-56.1085,-73.5682,-261.907,0,-188.728,-181.804 0|0:49:36,0,13:36:1425:0,13:0,522:-32.5767,-43.4138,-160.687,0,-117.673,-113.76 0|0:64:59,0,5:59:2336:0,5:0,198:0,-17.7608,-210.02,-1.06945,-193.724,-192.219 dDocent_Contig_1703 105 . N A 97.1169 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=2X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.91202;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=104;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:3:0,3:0:0:3:104:-9.70309,-0.90309,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_1704 55 . A T 83.0875 . AB=0.151515;ABP=37.8197;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=182;DPB=182;DPRA=1.10738;EPP=13.8677;EPPR=387.361;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.813559;PAO=0;PQA=0;PQR=0;PRO=0;QA=202;QR=7073;RO=177;RPL=5;RPP=13.8677;RPPR=387.361;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=177;SRP=387.361;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:923:0:0:0,-6.92369,-83.3744 0/0:43:43,0:43:1707:0:0:0,-12.9443,-153.859 0/0:22:22,0:22:879:0:0:0,-6.62266,-79.4155 0/0:39:39,0:39:1551:0:0:0,-11.7402,-139.831 0/0:22:22,0:22:885:0:0:0,-6.62266,-79.9586 0/1:33:28,5:28:1128:5:202:-8.6275,0,-91.8681 dDocent_Contig_1705 12 . G T 571.481 . AB=0.028777;ABP=271.101;AC=0;AF=0;AN=12;AO=11;CIGAR=1X2M1X;DP=409;DPB=409;DPRA=0;EPP=26.8965;EPPR=771.712;GTI=0;LEN=1;MEANALT=2.25;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.909091;PAIREDR=0.943503;PAO=0;PQA=0;PQR=0;PRO=0;QA=426;QR=13909;RO=354;RPL=0;RPP=26.8965;RPPR=771.712;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=354;SRP=771.712;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:54:44,0,10:44:1740:0,10:0,397:-19.8318,-33.0771,-176.267,0,-143.587,-140.576 0|0:78:70,0,8:70:2755:0,8:0,327:-6.31977,-27.3919,-254.008,0,-227.023,-224.615 0|0:69:64,4,1:64:2481:4,1:159,41:0,-6.18469,-208.76,-15.8794,-206.579,-219.37 0|0:66:49,3,14:49:1916:3,14:120,555:-30.9258,-35.7904,-192.407,0,-147.63,-153.301 0|0:69:63,3,3:63:2496:3,3:112,123:0,-9.81295,-214.334,-8.79446,-205.084,-213.35 0|0:73:64,1,7:64:2521:1,7:35,265:-2.47459,-18.8957,-226.004,0,-204.584,-205.324 dDocent_Contig_1706 18 . T G 611.729 . AB=0.192308;ABP=131.294;AC=2;AF=0.166667;AN=12;AO=30;CIGAR=1X;DP=454;DPB=454;DPRA=1.04698;EPP=68.1545;EPPR=921.543;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.484634;PAO=0;PQA=0;PQR=0;PRO=0;QA=1203;QR=16719;RO=423;RPL=0;RPP=68.1545;RPPR=921.543;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=423;SRP=921.543;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:68:68,0:68:2703:0:0:0,-20.47,-243.393 0/0:82:82,0:82:3233:0:0:0,-24.6845,-291.051 0/0:69:69,0:69:2680:0:0:0,-20.7711,-241.317 0/0:79:78,0:78:3098:0:0:0,-23.4803,-278.8 0/1:69:53,16:53:2108:16:643:-37.4334,0,-169.134 0/1:87:73,14:73:2897:14:560:-24.5531,0,-234.638 dDocent_Contig_1707 12 . C A 6050.38 . AB=0.173293;ABP=1822;AC=6;AF=0.5;AN=12;AO=340;CIGAR=1X;DP=1962;DPB=1962;DPRA=0;EPP=741.311;EPPR=3520.8;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13315;QR=64955;RO=1620;RPL=0;RPP=741.311;RPPR=3520.8;RPR=340;RUN=1;SAF=340;SAP=741.311;SAR=0;SRF=1620;SRP=3520.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:319:277,42:277:11143:42:1636:-51.441,0,-906.05 0/1:401:335,66:335:13451:66:2567:-110.483,0,-1088.83 0/1:350:302,46:302:12113:46:1814:-58.3361,0,-984.125 0/1:385:327,58:327:13105:58:2245:-86.3268,0,-1062.56 0/1:218:174,44:174:6986:44:1736:-90.8468,0,-562.777 0/1:289:205,84:205:8157:84:3317:-211.602,0,-646.686 dDocent_Contig_1708 73 . A G 401.399 . AB=0.181818;ABP=128.758;AC=1;AF=0.0833333;AN=12;AO=55;CIGAR=1X;DP=985;DPB=985;DPRA=0.887324;EPP=122.441;EPPR=2018.14;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.945455;PAIREDR=0.913793;PAO=0;PQA=0;PQR=0;PRO=0;QA=1952;QR=33540;RO=928;RPL=55;RPP=122.441;RPPR=2018.14;RPR=0;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=928;SRP=2018.14;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:143:117,26:117:4103:26:921:-40.1577,0,-326.393 0/0:169:155,14:155:5366:14:470:0,-8.25792,-440.456 0/0:125:115,10:115:4253:10:372:0,-3.8006,-349.046 0/0:193:188,5:188:6891:5:189:0,-40.7234,-602.759 0/0:153:152,0:152:5552:0:0:0,-45.7566,-499.629 0/0:202:201,0:201:7375:0:0:0,-60.507,-663.263 dDocent_Contig_1709 25 . C T 300.207 . AB=0.206897;ABP=67.9298;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1X;DP=550;DPB=550;DPRA=0.344743;EPP=52.9542;EPPR=1147.38;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=800;QR=20475;RO=527;RPL=0;RPP=52.9542;RPPR=1147.38;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=527;SRP=1147.38;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:49,5:49:1892:5:174:0,-0.256677,-154.495 0/0:27:27,0:27:1058:0:0:0,-8.12781,-95.5113 0/1:51:39,12:39:1556:12:400:-20.9624,0,-124.93 0/1:36:30,6:30:1195:6:226:-9.86559,0,-96.9916 0/0:222:222,0:222:8539:0:0:0,-66.8287,-768.091 0/0:160:160,0:160:6235:0:0:0,-48.1648,-560.961 dDocent_Contig_1710 13 . T C 1124.83 . AB=0.133333;ABP=738.705;AC=1;AF=0.0833333;AN=12;AO=119;CIGAR=1X;DP=3741;DPB=3741;DPRA=0;EPP=261.416;EPPR=7861.57;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=59.9947;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992816;PAO=0;PQA=0;PQR=0;PRO=0;QA=4754;QR=142588;RO=3619;RPL=0;RPP=261.416;RPPR=7861.57;RPR=119;RUN=1;SAF=119;SAP=261.416;SAR=0;SRF=3619;SRP=7861.57;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:664:662,1:662:26103:1:36:0,-196.369,-2343.5 0/0:690:681,9:681:26796:9:360:0,-174.947,-2376.58 0/0:520:517,2:517:20426:2:78:0,-149.215,-1829.29 0/0:566:554,11:554:21880:11:432:0,-131.249,-1928.21 0/1:630:546,84:546:21490:84:3360:-112.802,0,-1742.73 0/0:671:659,12:659:25893:12:488:0,-157.72,-2283.97 dDocent_Contig_1711 14 . A T 2349.13 . AB=0.20794;ABP=394.947;AC=3;AF=0.25;AN=12;AO=115;CIGAR=1X;DP=764;DPB=764;DPRA=2.556;EPP=252.73;EPPR=1412.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.942989;PAO=0;PQA=0;PQR=0;PRO=0;QA=4592;QR=25711;RO=649;RPL=0;RPP=252.73;RPPR=1412.3;RPR=115;RUN=1;SAF=115;SAP=252.73;SAR=0;SRF=649;SRP=1412.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:189:119,70:119:4728:70:2801:-195.302,0,-368.546 0/1:248:216,32:216:8587:32:1267:-39.6475,0,-697.705 0/1:92:84,8:84:3294:8:321:-1.56155,0,-268.838 0/0:110:105,5:105:4138:5:203:0,-14.4602,-353.755 0/0:41:41,0:41:1630:0:0:0,-12.3422,-146.934 0/0:84:84,0:84:3334:0:0:0,-25.2865,-300.126 dDocent_Contig_1712 131 . C T 100.193 . AB=0.2;ABP=22.5536;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=233;DPB=233;DPRA=0.56044;EPP=18.2106;EPPR=493.763;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.714286;PAIREDR=0.876106;PAO=0;PQA=0;PQR=0;PRO=0;QA=269;QR=8487;RO=226;RPL=0;RPP=18.2106;RPPR=493.763;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=493.763;SRR=226;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:20,5:20:773:5:191:-10.0327,0,-62.372 0/0:26:24,2:24:909:2:78:0,-0.423307,-74.714 0/0:22:22,0:22:794:0:0:0,-6.62266,-71.7655 0/0:40:40,0:40:1521:0:0:0,-12.0412,-137.166 0/0:64:64,0:64:2410:0:0:0,-19.2659,-217.111 0/0:56:56,0:56:2080:0:0:0,-16.8577,-187.427 dDocent_Contig_1713 82 . G A 54.2535 . AB=0.166667;ABP=26.1727;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=244;DPB=244;DPRA=0.545455;EPP=11.6962;EPPR=524.164;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.9875;PAO=0;PQA=0;PQR=0;PRO=0;QA=137;QR=7700;RO=240;RPL=4;RPP=11.6962;RPPR=524.164;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=240;SRP=524.164;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:20,4:20:640:4:137:-5.44308,0,-50.6803 0/0:21:21,0:21:666:0:0:0,-6.32163,-60.2404 0/0:27:27,0:27:892:0:0:0,-8.12781,-80.5857 0/0:66:66,0:66:2116:0:0:0,-19.868,-190.708 0/0:16:16,0:16:496:0:0:0,-4.81648,-44.9385 0/0:90:90,0:90:2890:0:0:0,-27.0927,-260.349 dDocent_Contig_1714 107 . N C 460.294 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=18;CIGAR=1X;DP=18;DPB=18;DPRA=0;EPP=42.0968;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=495;QR=0;RO=0;RPL=0;RPP=42.0968;RPPR=0;RPR=18;RUN=1;SAF=0;SAP=42.0968;SAR=18;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:75:-6.99797,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:83:-7.67637,-1.20412,0 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 1/1:10:0,10:0:0:10:330:-30.0207,-3.0103,0 dDocent_Contig_1715 11 . T C 39086.9 . AB=0.749113;ABP=611.03;AC=8;AF=0.666667;AN=12;AO=1185;CIGAR=1X;DP=1468;DPB=1468;DPRA=0;EPP=2576.21;EPPR=617.537;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997468;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=47258;QR=11270;RO=283;RPL=0;RPP=2576.21;RPPR=617.537;RPR=1185;RUN=1;SAF=1185;SAP=2576.21;SAR=0;SRF=283;SRP=617.537;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:253:70,183:70:2772:183:7285:-579.134,0,-173.43 0/1:198:39,159:39:1552:159:6361:-512.62,0,-80.3149 0/1:391:87,304:87:3455:304:12113:-971.602,0,-193.289 0/1:286:87,199:87:3491:199:7903:-624.751,0,-228.125 1/1:159:0,159:0:0:159:6338:-570.154,-47.8638,0 1/1:181:0,181:0:0:181:7258:-652.832,-54.4864,0 dDocent_Contig_1716 61 . G C 5161.9 . AB=0.632959;ABP=44.008;AC=6;AF=0.5;AN=12;AO=169;CIGAR=1X;DP=267;DPB=267;DPRA=0;EPP=369.989;EPPR=215.815;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.822485;PAIREDR=0.72449;PAO=0;PQA=0;PQR=0;PRO=0;QA=6654;QR=3767;RO=98;RPL=169;RPP=369.989;RPPR=215.815;RPR=0;RUN=1;SAF=169;SAP=369.989;SAR=0;SRF=98;SRP=215.815;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:7,27:7:272:27:1058:-85.2723,0,-14.6087 0/1:63:26,37:26:1026:37:1486:-115.02,0,-73.671 0/1:20:9,11:9:344:11:446:-34.4739,0,-25.2947 0/1:54:28,26:28:1027:26:1019:-75.7415,0,-76.4569 0/1:30:12,18:12:469:18:723:-56.3658,0,-33.5262 0/1:66:16,50:16:629:50:1922:-153.314,0,-37.0748 dDocent_Contig_1717 107 . N A 250.773 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=11;CIGAR=1X;DP=11;DPB=11;DPRA=0;EPP=26.8965;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=261;QR=0;RO=0;RPL=0;RPP=26.8965;RPPR=0;RPR=11;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:75:-6.99847,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:66:-6.26831,-0.60206,0 1/1:3:0,3:0:0:3:74:-6.90474,-0.90309,0 1/1:3:0,3:0:0:3:46:-4.29301,-0.90309,0 dDocent_Contig_1718 107 . N C 250.153 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=10;CIGAR=1X;DP=10;DPB=10;DPRA=0;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=259;QR=0;RO=0;RPL=0;RPP=24.725;RPPR=0;RPR=10;RUN=1;SAF=0;SAP=24.725;SAR=10;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 1/1:3:0,3:0:0:3:83:-7.74457,-0.90309,0 1/1:2:0,2:0:0:2:51:-4.84444,-0.60206,0 1/1:4:0,4:0:0:4:92:-8.50905,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1719 22 . C T 513.006 . AB=0.11032;ABP=1114.89;AC=2;AF=0.166667;AN=12;AO=119;CIGAR=1X;DP=2475;DPB=2475;DPRA=0.853933;EPP=261.416;EPPR=5112.48;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4352;QR=93586;RO=2353;RPL=0;RPP=261.416;RPPR=5112.48;RPR=119;RUN=1;SAF=119;SAP=261.416;SAR=0;SRF=2353;SRP=5112.48;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:313:313,0:313:12387:0:0:0,-94.2224,-1113.98 0/1:382:332,48:332:13182:48:1779:-45.7316,0,-1070.82 0/0:297:271,26:271:10747:26:963:0,-2.42394,-879.56 0/1:461:416,45:416:16604:45:1610:-6.38256,0,-1354.26 0/0:428:428,0:428:17067:0:0:0,-128.841,-1534.68 0/0:594:593,0:593:23599:0:0:0,-178.511,-2121.72 dDocent_Contig_1720 38 . G T 23086.8 . AB=0.195386;ABP=4544.6;AC=6;AF=0.5;AN=12;AO=1101;CIGAR=1M1X1M;DP=5635;DPB=5581.67;DPRA=0;EPP=2393.8;EPPR=9468.46;GTI=0;LEN=1;MEANALT=4.33333;MQM=59.9882;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.000908265;PAIREDR=0.259234;PAO=0;PQA=0;PQR=0;PRO=0;QA=44010;QR=170554;RO=4359;RPL=0;RPP=2393.8;RPPR=9468.46;RPR=1101;RUN=1;SAF=1101;SAP=2393.8;SAR=0;SRF=4359;SRP=9468.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:883:713,24,144:713:27795:24,144:924,5819:-265.117,-403.902,-2681.07,0,-2208.56,-2241.07 0|1:978:777,22,178:777:30405:22,178:853,7077:-348.729,-512.562,-3005.73,0,-2429.74,-2446.22 0|1:902:781,7,113:781:30787:7,113:271,4543:-139.311,-352.159,-2882.83,0,-2510.57,-2498.81 0|1:1008:761,19,223:761:29703:19,223:731,8904:-504.217,-673.3,-3109.05,0,-2381.48,-2374.35 0|1:821:545,44,231:545:21267:44,231:1674,9233:-596.412,-623.215,-2358.03,0,-1610.81,-1678.54 0|1:1043:782,44,212:782:30597:44,212:1703,8434:-458.887,-554.432,-3056.7,0,-2375.67,-2451.71 dDocent_Contig_1721 107 . N A 464.408 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=15;CIGAR=1X4M1X;DP=20;DPB=20.1667;DPRA=1.13333;EPP=35.5824;EPPR=0;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=0;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0.5;PQA=5;PQR=0;PRO=0;QA=459;QR=0;RO=0;RPL=0;RPP=35.5824;RPPR=0;RPR=15;RUN=1;SAF=0;SAP=35.5824;SAR=15;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:2:0,0,2:0:0:0,2:0,59:-5.57787,-5.57787,-5.57787,-0.60206,-0.60206,0 1|1:6:0,0,6:0:0:0,6:0,182:-16.6787,-16.6787,-16.6787,-1.80618,-1.80618,0 1|1:1:0,0,1:0:0:0,1:0,35:-3.49863,-3.49863,-3.49863,-0.30103,-0.30103,0 1|1:6:0,0,4:0:0:0,4:0,117:-10.5692,-10.5692,-10.5692,-1.20412,-1.20412,0 1|1:2:0,0,2:0:0:0,2:0,66:-6.26831,-6.26831,-6.26831,-0.60206,-0.60206,0 1|1:3:0,2,0:0:0:2,0:35,0:-3.04003,-0.60206,0,-3.04003,-0.60206,-3.04003 dDocent_Contig_1724 10 . A C 14845.8 . AB=0.300921;ABP=675.66;AC=6;AF=0.5;AN=12;AO=588;CIGAR=1X1M1X;DP=1954;DPB=1954;DPRA=0;EPP=1279.84;EPPR=2600.09;GTI=0;LEN=1;MEANALT=3.66667;MQM=56.6548;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.392977;PAO=0;PQA=0;PQR=0;PRO=0;QA=22635;QR=45926;RO=1196;RPL=0;RPP=1279.84;RPPR=2600.09;RPR=588;RUN=1;SAF=588;SAP=1279.84;SAR=0;SRF=1196;SRP=2600.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:263:171,65,25:171:6558:65,25:2515,964:-154.772,0,-518.693,-127.086,-459.098,-657.821 0|1:292:178,80,29:178:6832:80,29:3066,1116:-195.492,0,-536.713,-157.446,-469.168,-709.512 0|1:247:158,77,12:158:6080:77,12:2970,453:-194.386,0,-476.016,-204.823,-462.07,-700.4 0|1:350:247,75,26:247:9495:75,26:2894,1003:-161.366,0,-756.914,-153.351,-697.122,-925.018 0|1:402:224,149,24:224:8577:149,24:5716,902:-399.233,0,-659.036,-392.767,-629.993,-1089.42 0|1:400:218,142,34:218:8384:142,34:5474,1308:-383.331,0,-645.572,-341.566,-580.929,-1019.65 dDocent_Contig_1725 129 . C T 6138.93 . AB=0.26805;ABP=566.117;AC=2;AF=0.166667;AN=12;AO=323;CIGAR=1X;DP=1679;DPB=1679;DPRA=5.08439;EPP=704.396;EPPR=2947.53;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99705;PAO=0;PQA=0;PQR=0;PRO=0;QA=10857;QR=44147;RO=1356;RPL=0;RPP=704.396;RPPR=2947.53;RPR=323;RUN=1;SAF=0;SAP=704.396;SAR=323;SRF=0;SRP=2947.53;SRR=1356;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:131:131,0:131:4304:0:0:0,-39.4349,-387.564 0/0:167:167,0:167:5549:0:0:0,-50.272,-499.579 0/0:90:90,0:90:2855:0:0:0,-27.0927,-257.19 0/0:86:86,0:86:2762:0:0:0,-25.8886,-248.827 0/1:700:514,186:514:16813:186:6288:-355.333,0,-1302.3 0/1:505:368,137:368:11864:137:4569:-259.374,0,-915.747 dDocent_Contig_1726 7 . T C 62.4008 . AB=0.102564;ABP=163.532;AC=1;AF=0.0833333;AN=12;AO=58;CIGAR=1X;DP=885;DPB=885;DPRA=0;EPP=104.246;EPPR=1783.62;GTI=0;LEN=1;MEANALT=1.66667;MQM=59.9483;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.896552;PAIREDR=0.99878;PAO=0;PQA=0;PQR=0;PRO=0;QA=2237;QR=31135;RO=820;RPL=0;RPP=128.956;RPPR=1783.62;RPR=58;RUN=1;SAF=55;SAP=104.246;SAR=3;SRF=820;SRP=1783.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:117:105,12:105:3995:12:457:-6.25767,0,-324.429 0/0:192:176,16:176:6683:16:617:0,-1.92978,-545.517 0/0:123:111,8:111:4223:8:308:0,-8.12001,-352.077 0/0:186:175,11:175:6659:11:426:0,-17.2969,-560.529 0/0:160:150,9:150:5679:9:351:0,-16.1759,-479.151 0/0:107:103,2:103:3896:2:78:0,-24.5943,-343.349 dDocent_Contig_1727 98 . N G 2405.74 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=91;CIGAR=1X;DP=91;DPB=91;DPRA=0;EPP=200.614;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=59.5165;MQMR=0;NS=6;NUMALT=1;ODDS=5.42101e-20;PAIRED=0.0879121;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2646;QR=0;RO=0;RPL=91;RPP=200.614;RPPR=0;RPR=0;RUN=1;SAF=91;SAP=200.614;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:21:0,21:0:0:21:657:-59.4259,-6.32163,0 1/1:11:0,11:0:0:11:317:-28.8111,-3.31133,0 1/1:14:0,14:0:0:14:371:-33.6487,-4.21442,0 1/1:21:0,21:0:0:21:635:-57.3561,-6.32163,0 1/1:15:0,15:0:0:15:405:-36.7118,-4.51545,0 1/1:9:0,9:0:0:9:261:-23.7751,-2.70927,0 dDocent_Contig_1728 98 . N C 209.325 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=217;QR=0;RO=0;RPL=7;RPP=18.2106;RPPR=0;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:52:-4.93894,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 1/1:4:0,4:0:0:4:133:-12.2986,-1.20412,0 dDocent_Contig_1729 24 . G A 5348.61 . AB=0.172515;ABP=1595.93;AC=4;AF=0.333333;AN=12;AO=338;CIGAR=1X;DP=2720;DPB=2720;DPRA=0;EPP=736.968;EPPR=5175.46;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13401;QR=94780;RO=2382;RPL=0;RPP=736.968;RPPR=5175.46;RPR=338;RUN=1;SAF=338;SAP=736.968;SAR=0;SRF=2382;SRP=5175.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:326:294,32:294:11711:32:1232:-13.0052,0,-954.999 0/0:484:483,1:483:19144:1:40:0,-141.703,-1717.39 0/1:381:289,92:289:11580:92:3698:-218.139,0,-926.674 0/0:526:484,42:484:19254:42:1676:0,-7.27655,-1580.18 0/1:495:395,100:395:15691:100:3909:-202.806,0,-1261.94 0/1:508:437,71:437:17400:71:2846:-103.316,0,-1411.65 dDocent_Contig_1730 146 . A G 322.232 . AB=0.175258;ABP=91.8616;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1X;DP=490;DPB=490;DPRA=0.480363;EPP=44.2683;EPPR=1021.43;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.982942;PAO=0;PQA=0;PQR=0;PRO=0;QA=727;QR=16811;RO=469;RPL=0;RPP=44.2683;RPPR=1021.43;RPR=19;RUN=1;SAF=0;SAP=44.2683;SAR=19;SRF=0;SRP=1021.43;SRR=469;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:26,1:26:982:1:40:0,-4.13213,-84.6932 0/0:98:98,0:98:3488:0:0:0,-29.5009,-314.084 0/0:35:34,1:34:1239:1:7:0,-9.83605,-111.097 0/1:97:79,17:79:2820:17:680:-32.542,0,-225.016 0/0:102:101,0:101:3578:0:0:0,-30.404,-322.085 0/0:131:131,0:131:4704:0:0:0,-39.4349,-423.452 dDocent_Contig_1731 98 . N C 136.18 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=5;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=4.33681e-19;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=136;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:26:-2.59983,-0.30103,0 1/1:3:0,2:0:0:2:61:-5.64523,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,1:0:0:1:20:-1.83996,-0.30103,0 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 dDocent_Contig_1732 46 . T C 66917.1 . AB=0.625648;ABP=478.847;AC=6;AF=0.5;AN=12;AO=2171;CIGAR=1X;DP=3470;DPB=3470;DPRA=0;EPP=4699.92;EPPR=2823.75;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999539;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=86074;QR=50965;RO=1299;RPL=2;RPP=4699.92;RPPR=2823.75;RPR=2169;RUN=1;SAF=2171;SAP=4717.28;SAR=0;SRF=1299;SRP=2823.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:359:108,251:108:4256:251:9953:-787.084,0,-274.947 0/1:595:94,501:94:3675:501:19912:-1611.32,0,-151.671 0/1:316:114,202:114:4395:202:8048:-628.753,0,-300.396 0/1:540:278,262:278:10864:262:10339:-767.322,0,-814.531 0/1:807:352,455:352:13924:455:18032:-1378.51,0,-1009.24 0/1:853:353,500:353:13851:500:19790:-1522.71,0,-988.873 dDocent_Contig_1733 98 . N A 307.038 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=15;CIGAR=1X;DP=15;DPB=15;DPRA=0;EPP=35.5824;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=322;QR=0;RO=0;RPL=15;RPP=35.5824;RPPR=0;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:101:-9.3401,-1.20412,0 1/1:3:0,3:0:0:3:82:-7.65196,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:18:-1.70999,-0.60206,0 1/1:3:0,3:0:0:3:37:-3.45329,-0.90309,0 1/1:3:0,3:0:0:3:84:-7.83836,-0.90309,0 dDocent_Contig_1734 12 . T A 36.2038 . AB=0.115385;ABP=36.4176;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=419;DPB=419;DPRA=0.610592;EPP=11.6962;EPPR=904.171;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=163;QR=16586;RO=415;RPL=0;RPP=11.6962;RPPR=904.171;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=415;SRP=904.171;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:23,3:23:912:3:123:-3.63801,0,-74.5592 0/0:75:75,0:75:3017:0:0:0,-22.5772,-271.61 0/0:65:65,0:65:2589:0:0:0,-19.5669,-233.135 0/0:56:56,0:56:2239:0:0:0,-16.8577,-201.674 0/0:72:71,1:71:2815:1:40:0,-17.6785,-249.457 0/0:125:125,0:125:5014:0:0:0,-37.6287,-451.122 dDocent_Contig_1735 55 . G T 80.0601 . AB=0.118812;ABP=130.482;AC=3;AF=0.25;AN=12;AO=12;CIGAR=1X;DP=271;DPB=271;DPRA=0.594118;EPP=29.068;EPPR=556.769;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.7143;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992278;PAO=0;PQA=0;PQR=0;PRO=0;QA=433;QR=10194;RO=259;RPL=12;RPP=29.068;RPPR=548.184;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=258;SRP=556.769;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:17,3:17:665:3:98:-3.12358,0,-54.159 0/1:29:25,4:25:1007:4:145:-4.674,0,-82.1957 0/0:38:38,0:38:1509:0:0:0,-11.4391,-136.057 0/1:52:47,5:47:1850:5:190:-1.81064,0,-151.06 0/0:63:63,0:63:2433:0:0:0,-18.9649,-219.119 0/0:69:69,0:69:2730:0:0:0,-20.7711,-243.349 dDocent_Contig_1736 98 . N T 2438.48 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=82;CIGAR=1X;DP=82;DPB=82;DPRA=0;EPP=181.071;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=59.8537;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2679;QR=0;RO=0;RPL=82;RPP=181.071;RPPR=0;RPR=0;RUN=1;SAF=82;SAP=181.071;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:138:-12.7526,-1.20412,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:2:0,2:0:0:2:65:-6.17303,-0.60206,0 1/1:18:0,18:0:0:18:518:-46.8945,-5.41854,0 1/1:23:0,23:0:0:23:782:-70.6916,-6.92369,0 1/1:34:0,34:0:0:34:1141:-102.985,-10.235,0 dDocent_Contig_1737 45 . T C 808.741 . AB=0.215569;ABP=120.361;AC=2;AF=0.166667;AN=12;AO=36;CIGAR=1X;DP=536;DPB=536;DPRA=0.905149;EPP=81.1833;EPPR=1088.75;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.861111;PAIREDR=0.85;PAO=0;PQA=0;PQR=0;PRO=0;QA=1459;QR=19891;RO=500;RPL=0;RPP=81.1833;RPPR=1088.75;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=500;SRP=1088.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:101:101,0:101:3964:0:0:0,-30.404,-356.751 0/0:94:94,0:94:3751:0:0:0,-28.2968,-337.598 0/0:76:76,0:76:3009:0:0:0,-22.8783,-270.899 0/0:98:98,0:98:3907:0:0:0,-29.5009,-351.63 0/1:82:65,17:65:2604:17:694:-38.1031,0,-209.797 0/1:85:66,19:66:2656:19:765:-43.5845,0,-213.57 dDocent_Contig_1738 32 . A T 86763.1 . AB=0.0361364;ABP=5536.93;AC=0;AF=0;AN=12;AO=107;CIGAR=1X3M1X;DP=4618;DPB=4618;DPRA=0;EPP=235.358;EPPR=3616.34;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.998197;PAO=0;PQA=0;PQR=0;PRO=0;QA=4193;QR=64272;RO=1664;RPL=0;RPP=235.358;RPPR=3616.34;RPR=107;RUN=1;SAF=107;SAP=235.358;SAR=0;SRF=1664;SRP=3616.34;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:816:290,57,465:290:11161:57,465:2229,18546:-1439.93,-1343.98,-2243.14,0,-733.072,-776.336 0|0:790:252,29,507:252:9826:29,507:1132,20195:-1586.96,-1569.77,-2368.69,0,-714.6,-655.026 0|0:453:146,8,296:146:5642:8,296:320,11702:-918.922,-936.513,-1397.47,0,-437.01,-374.265 0|0:902:248,13,608:248:9511:13,608:512,24269:-1923.97,-1956.51,-2733.2,0,-738.473,-597.568 0|0:722:296,0,423:296:11517:0,423:0,16877:-1300.87,-1389.97,-2336.39,0,-946.559,-819.224 0|0:935:432,0,498:432:16615:0,498:0,19908:-1509.66,-1639.7,-3003.67,0,-1363.96,-1214.05 dDocent_Contig_1739 11 . T A 18418.4 . AB=0.565666;ABP=42.9361;AC=6;AF=0.5;AN=12;AO=603;CIGAR=1X;DP=1066;DPB=1066;DPRA=0;EPP=1312.41;EPPR=1008.4;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.946932;PAIREDR=0.971922;PAO=0;PQA=0;PQR=0;PRO=0;QA=24076;QR=18398;RO=463;RPL=0;RPP=1312.41;RPPR=1008.4;RPR=603;RUN=1;SAF=603;SAP=1312.41;SAR=0;SRF=463;SRP=1008.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:175:84,91:84:3316:91:3661:-276.82,0,-245.83 0/1:215:89,126:89:3539:126:5048:-389.475,0,-253.821 0/1:95:34,61:34:1366:61:2458:-192.762,0,-94.602 0/1:218:96,122:96:3795:122:4840:-369.878,0,-275.936 0/1:143:82,61:82:3276:61:2395:-172.668,0,-251.85 0/1:220:78,142:78:3106:142:5674:-444.233,0,-213.39 dDocent_Contig_1740 34 . C A 275.193 . AB=0.100173;ABP=806.976;AC=2;AF=0.166667;AN=12;AO=106;CIGAR=1X;DP=1454;DPB=1454;DPRA=0;EPP=233.186;EPPR=2930.16;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=58.3724;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0283019;PAIREDR=0.960682;PAO=0;PQA=0;PQR=0;PRO=0;QA=4114;QR=52791;RO=1348;RPL=0;RPP=233.186;RPPR=2930.16;RPR=106;RUN=1;SAF=106;SAP=233.186;SAR=0;SRF=1348;SRP=2930.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:203:178,25:178:6941:25:968:-26.3104,0,-548.902 0/1:376:343,33:343:13477:33:1277:-2.01824,0,-1071.94 0/0:145:134,11:134:5240:11:433:0,-4.32465,-416.528 0/0:270:261,9:261:10279:9:349:0,-49.5118,-876.792 0/0:234:220,14:220:8601:14:542:0,-21.3195,-706.411 0/0:226:212,14:212:8253:14:545:0,-18.6414,-688.859 dDocent_Contig_1741 19 . T G 451.663 . AB=0.161491;ABP=163.254;AC=3;AF=0.25;AN=12;AO=29;CIGAR=1X;DP=311;DPB=311;DPRA=2.1037;EPP=65.983;EPPR=613.194;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.448276;PAIREDR=0.419929;PAO=0;PQA=0;PQR=0;PRO=0;QA=1167;QR=10662;RO=281;RPL=0;RPP=65.983;RPPR=613.194;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=281;SRP=613.194;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1011:0:0:0,-8.12781,-91.2933 0/0:54:52,2:52:1996:2:80:0,-8.66383,-172.274 0/1:50:45,5:45:1701:5:203:-3.60156,0,-138.282 0/0:69:67,1:67:2563:1:41:0,-16.78,-226.754 0/1:42:38,4:38:1411:4:161:-2.23164,0,-114.62 0/1:69:52,17:52:1980:17:682:-40.9398,0,-157.653 dDocent_Contig_1742 19 . A G 504.153 . AB=0.154229;ABP=211.742;AC=1;AF=0.0833333;AN=12;AO=54;CIGAR=1X;DP=998;DPB=998;DPRA=0.834197;EPP=120.27;EPPR=2050.71;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.99894;PAO=0;PQA=0;PQR=0;PRO=0;QA=2133;QR=37327;RO=943;RPL=0;RPP=120.27;RPPR=2050.71;RPR=54;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=943;SRP=2050.71;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:124:115,9:115:4455:9:359:0,-4.65453,-368.243 0/0:167:164,3:164:6530:3:112:0,-39.8266,-576.993 0/0:118:110,7:110:4368:7:275:0,-10.4944,-367.964 0/1:201:170,31:170:6744:31:1233:-50.7341,0,-546.158 0/0:193:193,0:193:7658:0:0:0,-58.0988,-688.837 0/0:195:191,4:191:7572:4:154:0,-44.4697,-666.88 dDocent_Contig_1743 1 . N G 110.111 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.91202;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=118;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:118:-11.0025,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1745 14 . C T 10978.6 . AB=0.295172;ABP=531.406;AC=6;AF=0.5;AN=12;AO=428;CIGAR=1X;DP=1450;DPB=1450;DPRA=0;EPP=932.4;EPPR=2222.26;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.214953;PAIREDR=0.257339;PAO=0;PQA=0;PQR=0;PRO=0;QA=17086;QR=41066;RO=1022;RPL=0;RPP=932.4;RPPR=2222.26;RPR=428;RUN=1;SAF=428;SAP=932.4;SAR=0;SRF=1022;SRP=2222.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:245:189,56:189:7572:56:2210:-125.318,0,-607.32 0/1:266:220,46:220:8900:46:1860:-87.5263,0,-720.346 0/1:154:118,36:118:4731:36:1447:-84.1167,0,-379.32 0/1:286:176,110:176:7044:110:4381:-308.139,0,-547.523 0/1:146:109,37:109:4399:37:1481:-89.5869,0,-351.88 0/1:353:210,143:210:8420:143:5707:-407.168,0,-651.039 dDocent_Contig_1746 98 . N C 87626.1 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=3433;CIGAR=2X;DP=3449;DPB=4212;DPRA=0;EPP=7448.99;EPPR=0;GTI=0;LEN=1;MEANALT=2.5;MQM=38.7096;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.92106;PAIREDR=0;PAO=1520;PQA=51153;PQR=0;PRO=0;QA=115733;QR=0;RO=0;RPL=3432;RPP=7448.99;RPPR=0;RPR=1;RUN=1;SAF=3433;SAP=7457.68;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:437:0,437:0:0:437:14708:-1118.39,-131.55,0 1|1:580:0,576:0:0:576:19572:-1519.89,-173.393,0 1|1:498:0,496:0:0:496:16693:-1258.75,-149.311,0 1|1:630:0,625:0:0:625:20976:-1583.67,-188.144,0 1|1:632:0,629:0:0:629:21171:-1593.2,-189.348,0 1|1:672:0,670:0:0:670:22613:-1687.87,-201.69,0 dDocent_Contig_1749 34 . T C 637.522 . AB=0.110119;ABP=890.264;AC=3;AF=0.25;AN=12;AO=102;CIGAR=1X;DP=1237;DPB=1237;DPRA=0;EPP=224.5;EPPR=2467.63;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.960784;PAIREDR=0.947137;PAO=0;PQA=0;PQR=0;PRO=0;QA=4062;QR=45310;RO=1135;RPL=0;RPP=224.5;RPPR=2467.63;RPR=102;RUN=1;SAF=102;SAP=224.5;SAR=0;SRF=1135;SRP=2467.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:164:154,10:154:6159:10:384:0,-14.4606,-519.153 0/1:221:200,21:200:7931:21:848:-10.1044,0,-646.845 0/0:127:124,3:124:4938:3:121:0,-26.9506,-433.029 0/1:205:184,21:184:7341:21:840:-14.2009,0,-598.625 0/0:274:259,15:259:10379:15:593:0,-28.7801,-879.72 0/1:246:214,32:214:8562:32:1276:-41.0565,0,-696.025 dDocent_Contig_1750 26 . A G 298.129 . AB=0.107246;ABP=465.257;AC=1;AF=0.0833333;AN=12;AO=37;CIGAR=1X;DP=1660;DPB=1660;DPRA=1.31179;EPP=83.3548;EPPR=3527.31;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995687;PAO=0;PQA=0;PQR=0;PRO=0;QA=1486;QR=64301;RO=1623;RPL=0;RPP=83.3548;RPPR=3527.31;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=1623;SRP=3527.31;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:273:273,0:273:10830:0:0:0,-82.1812,-974.02 0/0:317:317,0:317:12568:0:0:0,-95.4265,-1130.29 0/0:146:146,0:146:5835:0:0:0,-43.9504,-524.958 0/0:285:285,0:285:11287:0:0:0,-85.7935,-1015.09 0/0:294:294,0:294:11614:0:0:0,-88.5028,-1044.51 0/1:345:308,37:308:12167:37:1486:-30.1317,0,-990.363 dDocent_Contig_1751 59 . G A 90.9877 . AB=0.128571;ABP=86.8912;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=359;DPB=359;DPRA=1.33953;EPP=31.2394;EPPR=754.34;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.307692;PAIREDR=0.473988;PAO=0;PQA=0;PQR=0;PRO=0;QA=482;QR=13476;RO=346;RPL=13;RPP=31.2394;RPPR=754.34;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=346;SRP=754.34;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1584:0:0:0,-12.3422,-142.805 0/0:74:70,4:70:2684:4:147:0,-8.68878,-228.11 0/0:36:36,0:36:1432:0:0:0,-10.8371,-129.135 0/0:92:92,0:92:3613:0:0:0,-27.6948,-325.209 0/0:46:46,0:46:1799:0:0:0,-13.8474,-162.136 0/1:70:61,9:61:2364:9:335:-9.41753,0,-191.867 dDocent_Contig_1752 63 . C G 53.2543 . AB=0.119048;ABP=55.9529;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=314;DPB=314;DPRA=0.772059;EPP=13.8677;EPPR=673.995;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.909385;PAO=0;PQA=0;PQR=0;PRO=0;QA=199;QR=12251;RO=309;RPL=5;RPP=13.8677;RPPR=673.995;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=309;SRP=673.995;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:882:0:0:0,-6.62266,-79.6865 0/0:91:91,0:91:3598:0:0:0,-27.3937,-323.842 0/0:37:37,0:37:1489:0:0:0,-11.1381,-134.247 0/1:42:37,5:37:1473:5:199:-5.64418,0,-120.171 0/0:63:63,0:63:2497:0:0:0,-18.9649,-224.875 0/0:59:59,0:59:2312:0:0:0,-17.7608,-208.249 dDocent_Contig_1753 98 . N T 248.033 . AB=0;ABP=0;AC=8;AF=0.8;AN=10;AO=9;CIGAR=1X;DP=10;DPB=10;DPRA=2.25;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=255;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:32:-3.03987,-0.60206,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:1:0,1:0:0:1:22:-2.19993,-0.30103,0 ./.:.:.:.:.:.:.:. 0/0:1:0,0:0:0:0:0:0,0,0 1/1:4:0,4:0:0:4:131:-12.1142,-1.20412,0 dDocent_Contig_1754 9 . A T 1328.5 . AB=0.312139;ABP=56.0419;AC=2;AF=0.166667;AN=12;AO=60;CIGAR=1X;DP=513;DPB=513;DPRA=1.08333;EPP=133.299;EPPR=986.687;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995585;PAO=0;PQA=0;PQR=0;PRO=0;QA=2291;QR=17365;RO=453;RPL=0;RPP=133.299;RPPR=986.687;RPR=60;RUN=1;SAF=60;SAP=133.299;SAR=0;SRF=453;SRP=986.687;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:86:84,2:84:3207:2:78:0,-18.4851,-281.382 0/0:86:86,0:86:3304:0:0:0,-25.8886,-297.501 0/0:76:76,0:76:2926:0:0:0,-22.8783,-263.509 0/0:92:88,4:88:3365:4:156:0,-13.2775,-288.576 0/1:57:29,28:29:1102:28:1085:-80.7956,0,-82.3245 0/1:116:90,26:90:3461:26:972:-52.868,0,-276.703 dDocent_Contig_1755 71 . A T 7268.5 . AB=0.316258;ABP=266.344;AC=6;AF=0.5;AN=12;AO=284;CIGAR=1X;DP=898;DPB=898;DPRA=0;EPP=619.708;EPPR=1336.29;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11110;QR=23751;RO=614;RPL=284;RPP=619.708;RPPR=1336.29;RPR=0;RUN=1;SAF=284;SAP=619.708;SAR=0;SRF=614;SRP=1336.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:151:118,33:118:4587:33:1314:-73.0671,0,-367.34 0/1:111:60,51:60:2306:51:2009:-147.583,0,-174.302 0/1:138:122,16:122:4736:16:617:-14.3151,0,-384.642 0/1:159:132,27:132:5012:27:1061:-47.9139,0,-403.155 0/1:86:65,21:65:2558:21:827:-48.8578,0,-204.481 0/1:253:117,136:117:4552:136:5282:-399.11,0,-333.48 dDocent_Contig_1756 98 . N T 1197.39 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=38;CIGAR=2X;DP=38;DPB=42;DPRA=0;EPP=85.5263;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=5;PQA=145;PQR=0;PRO=0;QA=1319;QR=0;RO=0;RPL=38;RPP=85.5263;RPPR=0;RPR=0;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:17:0,17:0:0:17:590:-53.0804,-5.11751,0 1|1:4:0,4:0:0:4:139:-12.8526,-1.20412,0 .:.:.:.:.:.:.:. 1|1:17:0,17:0:0:17:590:-53.2034,-5.11751,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_1757 1 . N G 153.131 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=158;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:78:-7.40347,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:80:-7.59157,-0.60206,0 dDocent_Contig_1758 38 . A T 272.381 . AB=0.142857;ABP=142.605;AC=1;AF=0.0833333;AN=12;AO=31;CIGAR=1X;DP=946;DPB=946;DPRA=0.922764;EPP=70.3259;EPPR=1987.74;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1251;QR=36116;RO=914;RPL=0;RPP=70.3259;RPPR=1987.74;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=914;SRP=1987.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:131:131,0:131:5170:0:0:0,-39.4349,-465.168 0/1:126:108,18:108:4282:18:724:-27.5568,0,-347.424 0/0:178:167,11:167:6636:11:446:0,-13.0872,-556.451 0/0:150:147,2:147:5784:2:81:0,-37.4292,-512.775 0/0:175:175,0:175:6947:0:0:0,-52.6802,-624.921 0/0:186:186,0:186:7297:0:0:0,-55.9916,-656.395 dDocent_Contig_1759 11 . A T 4949.82 . AB=0.132915;ABP=1869.85;AC=4;AF=0.333333;AN=12;AO=212;CIGAR=1X4M;DP=1595;DPB=1595;DPRA=0;EPP=463.362;EPPR=2567.52;GTI=0;LEN=1;MEANALT=3.16667;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.999153;PAO=0;PQA=0;PQR=0;PRO=0;QA=8460;QR=46536;RO=1181;RPL=0;RPP=463.362;RPPR=2567.52;RPR=212;RUN=1;SAF=212;SAP=463.362;SAR=0;SRF=1181;SRP=2567.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:178:129,0,32,0,16:129:5081:0,32,0,16:0,1256,0,648:-64.4292,-103.262,-521.24,0,-417.97,-408.337,-103.262,-521.24,-417.97,-521.24,-49.828,-467.809,-364.539,-467.809,-462.992 0|1:226:152,0,56,1,17:152:6037:0,56,1,17:0,2231,41,674:-137.941,-183.697,-680.687,0,-496.991,-480.133,-180.313,-677.303,-493.607,-677.002,-128.223,-625.213,-441.516,-621.829,-620.095 0|1:294:215,15,34,0,30:215:8494:15,34,0,30:599,1376,0,1202:-48.7346,-64.1203,-758.528,0,-649.588,-688.69,-113.456,-763.043,-698.925,-812.38,-14.4351,-664.021,-599.902,-713.358,-704.327 0|1:261:216,0,36,0,9:216:8403:0,36,0,9:0,1425,0,356:-52.245,-117.267,-807.751,0,-690.483,-679.645,-117.267,-807.751,-690.483,-807.751,-87.9705,-778.454,-661.185,-778.454,-775.744 0|0:316:212,0,37,60,6:212:8378:0,37,60,6:0,1490,2368,235:-130.985,-194.804,-884.213,-71.9958,-761.408,-750.269,0,-689.407,-566.601,-671.345,-175.502,-864.911,-742.106,-670.105,-863.105 0|0:320:257,0,17,44,0:257:10143:0,17,44,0:0,682,1727,0:-64.6441,-142.009,-976.557,-85.8169,-920.368,-915.25,0,-834.548,-778.359,-821.303,-142.009,-976.557,-920.368,-834.548,-976.557 dDocent_Contig_1760 45 . G C 3815.21 . AB=0.116031;ABP=4196.92;AC=4;AF=0.333333;AN=12;AO=380;CIGAR=1X;DP=5424;DPB=5424;DPRA=0.761982;EPP=828.17;EPPR=10945.1;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.994737;PAIREDR=0.999206;PAO=0;PQA=0;PQR=0;PRO=0;QA=15216;QR=200417;RO=5039;RPL=0;RPP=828.17;RPPR=10945.1;RPR=380;RUN=1;SAF=380;SAP=828.17;SAR=0;SRF=5039;SRP=10945.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:860:730,129:730:28893:129:5178:-206.864,0,-2338.84 0/1:1012:901,111:901:35841:111:4465:-97.1305,0,-2917.73 0/1:469:408,60:408:16236:60:2378:-72.9082,0,-1318.69 0/1:934:851,80:851:33940:80:3195:-7.02306,0,-2770.88 0/0:1025:1025,0:1025:40720:0:0:0,-308.556,-3661.01 0/0:1124:1124,0:1124:44787:0:0:0,-338.358,-4026.53 dDocent_Contig_1761 31 . A G 15244.7 . AB=0.0218182;ABP=1095.36;AC=0;AF=0;AN=12;AO=12;CIGAR=1X1M1X;DP=750;DPB=750;DPRA=0;EPP=29.068;EPPR=545.878;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.833333;PAIREDR=0.912;PAO=0;PQA=0;PQR=0;PRO=0;QA=440;QR=9859;RO=250;RPL=0;RPP=29.068;RPPR=545.878;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=250;SRP=545.878;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:161:32,1,128:32:1222:1,128:18,5102:-410.7,-419.015,-518.955,0,-99.1264,-61.9074 0|0:149:40,2,107:40:1585:2,107:80,4280:-340.508,-345.959,-475.813,0,-123.863,-98.2427 0|0:74:14,0,60:14:549:0,60:0,2422:-195.847,-200.061,-245.206,0,-45.539,-27.4772 0|0:126:47,0,78:47:1859:0,78:0,3101:-241.332,-255.481,-408.464,0,-153.164,-129.684 0|0:115:55,7,53:55:2183:7,53:270,2121:-158.172,-152.557,-330.154,0,-157.544,-163.761 0|0:125:62,2,61:62:2461:2,61:72,2435:-181.908,-194.7,-396.683,0,-196.749,-184.259 dDocent_Contig_1762 108 . A G 480.566 . AB=0.339286;ABP=40.7009;AC=3;AF=0.25;AN=12;AO=61;CIGAR=1X;DP=385;DPB=385;DPRA=1.04194;EPP=41.7764;EPPR=287.297;GTI=0;LEN=1;MEANALT=1.4;MQM=24.5246;MQMR=22.4735;NS=6;NUMALT=1;ODDS=0;PAIRED=0.803279;PAIREDR=0.859813;PAO=0;PQA=0;PQR=0;PRO=0;QA=2302;QR=11230;RO=321;RPL=47;RPP=41.7764;RPPR=287.297;RPR=14;RUN=1;SAF=0;SAP=135.47;SAR=61;SRF=0;SRP=700.053;SRR=321;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:87:83,3:83:2873:3:122:0,-23.4668,-140.892 0/1:69:48,20:48:1635:20:757:-5.3022,0,-66.2183 0/1:32:18,14:18:662:14:507:-16.6506,0,-4.8171 0/1:67:44,23:44:1582:23:881:-27.7133,0,-32.2499 0/0:62:61,0:61:2109:0:0:0,-18.3628,-80.813 0/0:68:67,1:67:2369:1:35:0,-19.571,-122.667 dDocent_Contig_1763 20 . T G 365.305 . AB=0.393939;ABP=6.23461;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=244;DPB=244;DPRA=1.12174;EPP=39.9253;EPPR=428.896;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.352941;PAIREDR=0.431718;PAO=0;PQA=0;PQR=0;PRO=0;QA=679;QR=8987;RO=227;RPL=0;RPP=39.9253;RPPR=495.935;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=219;SRP=428.896;SRR=8;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:49,1:49:1905:1:41:0,-10.9569,-167.556 0/0:42:42,0:42:1678:0:0:0,-12.6433,-151.247 0/0:23:23,0:23:896:0:0:0,-6.92369,-80.9411 0/0:50:50,0:50:1986:0:0:0,-15.0515,-178.939 0/1:33:20,13:20:811:13:516:-36.8493,0,-63.3709 0/0:46:43,3:43:1711:3:122:0,-2.47489,-142.836 dDocent_Contig_1764 20 . G C 27614.1 . AB=0.559582;ABP=53.2103;AC=6;AF=0.5;AN=12;AO=911;CIGAR=1X;DP=1628;DPB=1628;DPRA=0;EPP=1981.22;EPPR=1559.96;GTI=0;LEN=1;MEANALT=1;MQM=59.9956;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998902;PAIREDR=0.997211;PAO=0;PQA=0;PQR=0;PRO=0;QA=36187;QR=28388;RO=717;RPL=0;RPP=1981.22;RPPR=1559.96;RPR=911;RUN=1;SAF=911;SAP=1981.22;SAR=0;SRF=717;SRP=1559.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:205:49,156:49:1933:156:6198:-495.871,0,-112.469 0/1:221:90,131:90:3543:131:5192:-400.632,0,-252.384 0/1:360:145,215:145:5781:215:8557:-661.273,0,-411.719 0/1:241:112,129:112:4385:129:5166:-392.249,0,-322.076 0/1:322:180,142:180:7161:142:5663:-412.543,0,-547.228 0/1:279:141,138:141:5585:138:5411:-402.844,0,-418.492 dDocent_Contig_1765 50 . A G 1035.09 . AB=0.187075;ABP=253.069;AC=4;AF=0.333333;AN=12;AO=64;CIGAR=1X;DP=442;DPB=442;DPRA=0;EPP=141.985;EPPR=821.655;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2479;QR=14832;RO=377;RPL=64;RPP=141.985;RPPR=821.655;RPR=0;RUN=1;SAF=64;SAP=141.985;SAR=0;SRF=377;SRP=821.655;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:58:44,14:44:1677:14:552:-32.5611,0,-133.694 0/1:96:73,23:73:2885:23:889:-51.4192,0,-230.867 0/1:92:80,12:80:3172:12:463:-14.3169,0,-257.87 0/0:67:65,2:65:2568:2:81:0,-12.4833,-223.582 0/0:81:73,7:73:2866:7:253:0,-1.37136,-234.942 0/1:48:42,6:42:1664:6:241:-7.61636,0,-135.538 dDocent_Contig_1766 19 . T C 15837.5 . AB=0.358736;ABP=282.767;AC=6;AF=0.5;AN=12;AO=579;CIGAR=1X;DP=1614;DPB=1614;DPRA=0;EPP=1260.29;EPPR=2248.31;GTI=0;LEN=1;MEANALT=1.16667;MQM=56.4991;MQMR=59.9981;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0328152;PAIREDR=0.757253;PAO=0;PQA=0;PQR=0;PRO=0;QA=23169;QR=41158;RO=1034;RPL=0;RPP=1260.29;RPPR=2248.31;RPR=579;RUN=1;SAF=579;SAP=1260.29;SAR=0;SRF=1034;SRP=2248.31;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:328:158,169:158:6246:169:6726:-505.853,0,-463.055 0/1:267:201,66:201:7992:66:2648:-158.068,0,-638.477 0/1:302:214,88:214:8556:88:3525:-226.289,0,-678.624 0/1:233:143,90:143:5705:90:3599:-253.796,0,-443.116 0/1:258:132,126:132:5251:126:5053:-368.018,0,-394.779 0/1:226:186,40:186:7408:40:1618:-75.727,0,-598.311 dDocent_Contig_1767 9 . A C 116.596 . AB=0.118812;ABP=130.482;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=674;DPB=674;DPRA=1.07763;EPP=35.5824;EPPR=1434.01;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=584;QR=25057;RO=659;RPL=0;RPP=35.5824;RPPR=1434.01;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=659;SRP=1434.01;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:122:122,0:122:4620:0:0:0,-36.7257,-415.861 0/0:135:132,3:132:5019:3:117:0,-29.7287,-440.825 0/0:70:70,0:70:2671:0:0:0,-21.0721,-240.579 0/0:142:142,0:142:5388:0:0:0,-42.7463,-484.927 0/1:101:89,12:89:3367:12:467:-11.9783,0,-272.765 0/0:104:104,0:104:3992:0:0:0,-31.3071,-359.371 dDocent_Contig_1768 14 . G A 48014.6 . AB=0.0344009;ABP=4764.99;AC=0;AF=0;AN=12;AO=87;CIGAR=1X1M1X;DP=3101;DPB=3101;DPRA=0;EPP=191.928;EPPR=3064.79;GTI=0;LEN=1;MEANALT=2.8;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.22045e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3400;QR=55313;RO=1410;RPL=0;RPP=191.928;RPPR=3064.79;RPR=87;RUN=1;SAF=87;SAP=191.928;SAR=0;SRF=1410;SRP=3064.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:415:147,1,267:147:5751:1,267:41,10583:-826.775,-867.643,-1340.14,0,-469.397,-392.406 0|0:572:256,0,315:256:9989:0,315:0,12562:-957.393,-1034.46,-1855.48,0,-821.022,-726.198 0|0:421:173,14,234:173:6817:14,234:530,9323:-715.616,-724.257,-1280.85,0,-517.383,-490.379 0|0:462:243,32,187:243:9605:32,187:1263,7454:-540.653,-509.887,-1290.63,0,-686.466,-734.09 0|0:496:255,14,227:255:10006:14,227:556,9047:-668.212,-699.202,-1517.84,0,-777.078,-754.518 0|0:735:336,26,369:336:13145:26,369:1010,14561:-1096.81,-1114.97,-2187.83,0,-997.707,-969.611 dDocent_Contig_1769 28 . C T 6936.7 . AB=0.447368;ABP=15.8106;AC=2;AF=0.166667;AN=12;AO=238;CIGAR=1X;DP=885;DPB=885;DPRA=3.01416;EPP=519.821;EPPR=1407.95;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9498;QR=25877;RO=647;RPL=0;RPP=519.821;RPPR=1407.95;RPR=238;RUN=1;SAF=238;SAP=519.821;SAR=0;SRF=647;SRP=1407.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:50,0:50:2023:0:0:0,-15.0515,-182.252 0/0:113:113,0:113:4511:0:0:0,-34.0164,-405.935 0/0:64:64,0:64:2553:0:0:0,-19.2659,-229.906 0/0:126:126,0:126:5035:0:0:0,-37.9298,-453.03 0/1:227:109,118:109:4365:118:4726:-356.907,0,-324.455 0/1:305:185,120:185:7390:120:4772:-337.576,0,-572.915 dDocent_Contig_1770 11 . A G 4849.79 . AB=0.669565;ABP=60.4505;AC=6;AF=0.5;AN=12;AO=154;CIGAR=1X;DP=230;DPB=230;DPRA=0;EPP=337.417;EPPR=168.042;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.642857;PAIREDR=0.513158;PAO=0;PQA=0;PQR=0;PRO=0;QA=6183;QR=3030;RO=76;RPL=0;RPP=337.417;RPPR=168.042;RPR=154;RUN=1;SAF=154;SAP=337.417;SAR=0;SRF=76;SRP=168.042;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:5,18:5:197:18:730:-59.0995,0,-11.1818 0/1:41:12,29:12:472:29:1173:-93.5015,0,-30.4842 0/1:29:8,21:8:311:21:811:-64.5691,0,-19.617 0/1:39:16,23:16:644:23:938:-72.9797,0,-46.5549 0/1:37:11,26:11:440:26:1051:-83.7413,0,-28.8175 0/1:61:24,37:24:966:37:1480:-115.085,0,-68.8765 dDocent_Contig_1771 14 . T C 121.792 . AB=0.122222;ABP=114.576;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=541;DPB=541;DPRA=1.07267;EPP=42.0968;EPPR=1138.69;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992352;PAO=0;PQA=0;PQR=0;PRO=0;QA=709;QR=20943;RO=523;RPL=0;RPP=42.0968;RPPR=1138.69;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=523;SRP=1138.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:49:48,1:48:1932:1:41:0,-10.6559,-169.983 0/1:90:79,11:79:3174:11:436:-12.4979,0,-258.632 0/0:152:149,3:149:5925:3:109:0,-35.5916,-522.855 0/0:78:75,3:75:3020:3:123:0,-12.0156,-260.409 0/0:72:72,0:72:2886:0:0:0,-21.6742,-259.834 0/0:100:100,0:100:4006:0:0:0,-30.103,-360.513 dDocent_Contig_1772 19 . A G 315.694 . AB=0.155738;ABP=128.6;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=2M1X;DP=497;DPB=494.667;DPRA=0.748744;EPP=50.7827;EPPR=1017.09;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.818182;PAIREDR=0.937901;PAO=0;PQA=0;PQR=0;PRO=0;QA=882;QR=18636;RO=467;RPL=0;RPP=50.7827;RPPR=1017.09;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=467;SRP=1017.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:72:58,0,14:58:2313:0,14:0,560:-29.0692,-46.529,-237.004,0,-190.874,-186.66 0|0:90:89,0,1:89:3564:0,1:0,40:0,-26.7917,-320.399,-23.097,-317.104,-316.803 0|1:50:44,0,5:44:1743:0,5:0,201:-3.31191,-16.5572,-160.003,0,-143.438,-141.933 0|0:86:77,7,2:77:3070:7,2:272,81:0,-0.845891,-251.542,-16.4965,-246.97,-268.713 0|0:91:91,0,0:91:3642:0,0:0,0:0,-27.3937,-327.802,-27.3937,-327.802,-327.802 0|0:108:108,0,0:108:4304:0,0:0,0:0,-32.5112,-387.326,-32.5112,-387.326,-387.326 dDocent_Contig_1773 98 . N G 52.4069 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.21888;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=55;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:55:-5.22366,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1774 68 . T A 1105.79 . AB=0.156463;ABP=455.075;AC=3;AF=0.25;AN=12;AO=69;CIGAR=1X;DP=643;DPB=643;DPRA=2.18317;EPP=152.842;EPPR=1247.26;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994764;PAO=0;PQA=0;PQR=0;PRO=0;QA=2709;QR=22589;RO=573;RPL=69;RPP=152.842;RPPR=1247.26;RPR=0;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=573;SRP=1247.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:158:158,0:158:6229:0:0:0,-47.5627,-560.393 0/1:238:203,34:203:8035:34:1336:-49.0704,0,-651.316 0/1:67:46,21:46:1823:21:826:-54.4839,0,-144.113 0/1:136:122,14:122:4799:14:547:-8.63411,0,-390.889 0/0:14:14,0:14:535:0:0:0,-4.21442,-48.4874 0/0:30:30,0:30:1168:0:0:0,-9.0309,-105.398 dDocent_Contig_1775 25 . A C 3681.85 . AB=0.112971;ABP=4667.36;AC=4;AF=0.333333;AN=12;AO=517;CIGAR=1X;DP=5154;DPB=5154;DPRA=0;EPP=1125.66;EPPR=10063.4;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998066;PAIREDR=0.999137;PAO=0;PQA=0;PQR=0;PRO=0;QA=20520;QR=184470;RO=4633;RPL=0;RPP=1125.66;RPPR=10063.4;RPR=517;RUN=1;SAF=517;SAP=1125.66;SAR=0;SRF=4633;SRP=10063.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:730:654,76:654:25902:76:3055:-55.2674,0,-2109.19 0/1:900:786,113:786:31315:113:4491:-133.093,0,-2544.48 0/0:540:494,46:494:19734:46:1788:0,-1.43139,-1613.27 0/1:848:758,89:758:30305:89:3538:-63.0722,0,-2469.3 0/1:1107:978,127:978:38909:127:5025:-119.158,0,-3165.21 0/0:1029:963,66:963:38305:66:2623:0,-73.5674,-3207.72 dDocent_Contig_1776 83 . A G 21090 . AB=0.788922;ABP=487.353;AC=8;AF=0.666667;AN=12;AO=686;CIGAR=1X;DP=828;DPB=828;DPRA=0;EPP=1492.64;EPPR=311.359;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.994169;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=25697;QR=5249;RO=142;RPL=686;RPP=1492.64;RPPR=311.359;RPR=0;RUN=1;SAF=686;SAP=1492.64;SAR=0;SRF=142;SRP=311.359;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:165:46,119:46:1656:119:4275:-335.228,0,-99.6515 0/1:118:18,100:18:655:100:3582:-287.048,0,-23.7604 0/1:162:25,137:25:946:137:5217:-420.769,0,-36.6856 0/1:223:52,171:52:1984:171:6532:-520.649,0,-111.674 1/1:138:1,137:1:8:137:5248:-471.519,-40.7421,0 1/1:22:0,22:0:0:22:843:-76.1921,-6.62266,0 dDocent_Contig_1777 26 . C A 50.4824 . AB=0.107143;ABP=78.0812;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=2X;DP=342;DPB=342;DPRA=0.923077;EPP=18.2106;EPPR=723.939;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.857143;PAIREDR=0.819277;PAO=0;PQA=0;PQR=0;PRO=0;QA=282;QR=13300;RO=332;RPL=0;RPP=18.2106;RPPR=723.939;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=332;SRP=723.939;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:55:54,0:54:2180:0:0:0,-16.2556,-195.956 0|0:66:65,0:65:2578:0:0:0,-19.5669,-231.886 0|0:49:49,0:49:1985:0:0:0,-14.7505,-178.838 0|0:64:64,0:64:2567:0:0:0,-19.2659,-231.159 0|1:56:49,6:49:1959:6:241:-5.367,0,-159.846 0|0:52:51,1:51:2031:1:41:0,-11.559,-178.877 dDocent_Contig_1778 48 . T C 45.2585 . AB=0.136364;ABP=28.2783;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=120;DPB=120;DPRA=0.904762;EPP=13.8677;EPPR=252.73;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.982609;PAO=0;PQA=0;PQR=0;PRO=0;QA=205;QR=4417;RO=115;RPL=0;RPP=13.8677;RPPR=252.73;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=115;SRP=252.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:583:0:0:0,-4.51545,-52.806 0/0:13:13,0:13:507:0:0:0,-3.91339,-45.9778 0/0:16:15,1:15:578:1:41:0,-0.721913,-48.2575 0/1:22:19,3:19:759:3:123:-4.84213,0,-62.0112 0/0:35:35,0:35:1317:0:0:0,-10.536,-118.809 0/0:19:18,1:18:673:1:41:0,-1.625,-56.7913 dDocent_Contig_1779 33 . G A 297.548 . AB=0.202703;ABP=59.8207;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=366;DPB=366;DPRA=1.26712;EPP=35.5824;EPPR=739.362;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.982906;PAO=0;PQA=0;PQR=0;PRO=0;QA=578;QR=13777;RO=351;RPL=0;RPP=35.5824;RPPR=713.973;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=348;SRP=739.362;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:96:96,0:96:3779:0:0:0,-28.8989,-340.155 0/0:58:58,0:58:2294:0:0:0,-17.4597,-206.638 0/1:74:59,15:59:2316:15:578:-30.0736,0,-186.344 0/0:44:44,0:44:1731:0:0:0,-13.2453,-156.021 0/0:40:40,0:40:1543:0:0:0,-12.0412,-139.122 0/0:54:54,0:54:2114:0:0:0,-16.2556,-190.463 dDocent_Contig_1780 13 . A C 55666.4 . AB=0.0310559;ABP=2770.75;AC=0;AF=0;AN=12;AO=45;CIGAR=1X2M2X;DP=2071;DPB=2071;DPRA=0;EPP=100.727;EPPR=226.672;GTI=0;LEN=1;MEANALT=4.75;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1803;QR=4106;RO=103;RPL=0;RPP=100.727;RPPR=226.672;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=103;SRP=226.672;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:309:19,0,131,17,135:19:764:0,131,17,135:0,5213,681,5445:-809.365,-815.085,-878.045,-385.867,-448.827,-409.392,-758.981,-821.941,-392.723,-816.824,-366.257,-429.218,0,-373.114,-388.579 0|0:467:0,0,284,13,155:0:0:0,284,13,155:0,11317,513,6149:-1438.02,-1438.02,-1438.02,-506.097,-506.097,-420.605,-1395.81,-1395.81,-463.888,-1391.9,-931.923,-931.923,0,-889.713,-885.263 0|0:380:8,0,175,0,196:8:320:0,175,0,196:0,6975,0,7859:-1193.07,-1195.48,-1221.84,-621.11,-647.469,-594.789,-1195.48,-1221.84,-647.469,-1221.84,-548.014,-574.373,0,-574.373,-515.371 0|0:338:9,9,149,9,149:9:360:9,149,9,149:365,5933,367,5960:-947.09,-919.698,-946.644,-461.273,-460.827,-446.075,-919.52,-919.075,-460.649,-946.466,-458.873,-458.427,0,-458.249,-443.675 0|0:242:48,0,127,0,59:48:1908:0,127,0,59:0,5055,0,2392:-441.935,-456.384,-613.471,-40.174,-197.258,-159.028,-456.384,-613.471,-197.258,-613.471,-259.127,-416.215,0,-416.215,-398.454 0|0:335:19,65,129,6,116:19:754:65,129,6,116:2565,5152,242,4667:-741.153,-535.841,-578.341,-322.544,-173.58,-345.779,-726.924,-577.959,-364.663,-787.185,-362.264,-213.298,0,-404.382,-389.411 dDocent_Contig_1783 7 . C T 140874 . AB=0.844945;ABP=2895.79;AC=9;AF=0.75;AN=12;AO=4473;CIGAR=1X;DP=5023;DPB=5023;DPRA=0;EPP=9716.01;EPPR=1186.46;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=0.999329;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=170378;QR=20741;RO=545;RPL=0;RPP=9716.01;RPPR=1186.46;RPR=4473;RUN=1;SAF=4473;SAP=9716.01;SAR=0;SRF=545;SRP=1186.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:887:93,793:93:3564:793:30239:-2452.62,0,-53.7813 1/1:893:19,873:19:721:873:33288:-2928.71,-203.686,0 1/1:564:45,519:45:1730:519:19711:-1617.02,-13.8232,0 1/1:767:50,716:50:1901:716:27360:-2289.48,-59.602,0 0/1:986:175,810:175:6647:810:30794:-2472.98,0,-301.464 0/1:926:163,762:163:6178:762:28986:-2328.25,0,-277.162 dDocent_Contig_1784 12 . G A 307.538 . AB=0.254902;ABP=29.6215;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=834;DPB=834;DPRA=0.822335;EPP=37.7539;EPPR=1779.27;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=634;QR=32664;RO=818;RPL=0;RPP=37.7539;RPPR=1779.27;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=818;SRP=1779.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:108:108,0:108:4286:0:0:0,-32.5112,-385.687 0/0:191:191,0:191:7643:0:0:0,-57.4967,-687.463 0/0:151:151,0:151:6000:0:0:0,-45.4555,-539.777 0/0:141:141,0:141:5651:0:0:0,-42.4452,-508.382 0/0:192:189,3:189:7555:3:122:0,-46.4253,-668.188 0/1:51:38,13:38:1529:13:512:-31.0726,0,-122.494 dDocent_Contig_1785 38 . A G 636.041 . AB=0.117647;ABP=736.968;AC=2;AF=0.166667;AN=12;AO=91;CIGAR=1X;DP=1819;DPB=1819;DPRA=0.851412;EPP=200.614;EPPR=3755.31;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3511;QR=67714;RO=1728;RPL=0;RPP=200.614;RPPR=3755.31;RPR=91;RUN=1;SAF=91;SAP=200.614;SAR=0;SRF=1728;SRP=3755.31;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:256:223,33:223:8763:33:1277:-38.1416,0,-711.182 0/0:347:331,16:331:12950:16:602:0,-49.9504,-1110.18 0/1:322:287,35:287:11253:35:1366:-26.2761,0,-915.137 0/0:221:214,7:214:8392:7:266:0,-42.2323,-730.561 0/0:383:383,0:383:15009:0:0:0,-115.294,-1349.78 0/0:290:290,0:290:11347:0:0:0,-87.2987,-1020.54 dDocent_Contig_1788 83 . A G 4271.73 . AB=0.170423;ABP=1719.18;AC=2;AF=0.166667;AN=12;AO=316;CIGAR=1X;DP=5389;DPB=5389;DPRA=0.805475;EPP=689.196;EPPR=10999.3;GTI=0;LEN=1;MEANALT=2.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11014;QR=174933;RO=5064;RPL=316;RPP=689.196;RPPR=10999.3;RPR=0;RUN=1;SAF=316;SAP=689.196;SAR=0;SRF=5064;SRP=10999.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:783:781,1:781:26697:1:8:0,-234.68,-2401.42 0/0:1162:1159,0:1159:39490:0:0:0,-348.894,-3552.94 0/0:723:717,5:717:24937:5:177:0,-201.184,-2227.5 0/0:902:901,0:901:31379:0:0:0,-271.228,-2822.93 0/1:769:595,172:595:20771:172:5985:-307.717,0,-1637.89 0/1:1050:911,138:911:31659:138:4844:-120.269,0,-2532.62 dDocent_Contig_1789 39 . T C 268.672 . AB=0.0572917;ABP=329.862;AC=2;AF=0.166667;AN=12;AO=27;CIGAR=1X4M;DP=624;DPB=624;DPRA=0;EPP=61.6401;EPPR=1212.52;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.964093;PAO=0;PQA=0;PQR=0;PRO=0;QA=1080;QR=21821;RO=557;RPL=0;RPP=61.6401;RPPR=1212.52;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=557;SRP=1212.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:114:93,13,8:93:3595:13,8:517,317:-14.5713,0,-291.314,-16.4776,-269.137,-309.296 0|0:112:105,3,4:105:4141:3,4:114,161:0,-22.2696,-362.061,-18.3266,-349.696,-357.839 0|1:78:65,10,3:65:2584:10,3:397,121:-13.1096,0,-209.723,-22.7008,-202.759,-234.537 0|0:117:110,3,3:110:4339:3,3:116,123:0,-23.5621,-379.71,-22.9194,-370.461,-379.084 0|0:96:86,5,4:86:3365:5,4:198,156:0,-9.57898,-284.76,-13.0627,-273.444,-288.537 0|0:107:98,4,5:98:3797:4,5:162,202:0,-16.1479,-326.834,-12.8486,-311.384,-323.232 dDocent_Contig_1790 29 . G A 4888.25 . AB=0.453333;ABP=10.1038;AC=6;AF=0.5;AN=12;AO=170;CIGAR=2X;DP=375;DPB=375;DPRA=0;EPP=372.161;EPPR=448.162;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.960976;PAO=0;PQA=0;PQR=0;PRO=0;QA=6711;QR=8136;RO=205;RPL=0;RPP=372.161;RPPR=448.162;RPR=170;RUN=1;SAF=170;SAP=372.161;SAR=0;SRF=205;SRP=448.162;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:39:26,13:26:1029:13:504:-33.9609,0,-81.1684 0|1:98:63,35:63:2508:35:1395:-96.311,0,-196.364 0|1:69:48,21:48:1909:21:838:-54.9659,0,-151.247 0|1:73:26,47:26:1021:47:1837:-143.574,0,-70.2043 0|1:33:11,22:11:438:22:861:-67.8687,0,-29.8413 0|1:63:31,32:31:1231:32:1276:-96.1418,0,-92.1012 dDocent_Contig_1791 14 . G T 35.1686 . AB=0.0985915;ABP=102.378;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=295;DPB=295;DPRA=1.56522;EPP=31.2394;EPPR=615.366;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.230769;PAIREDR=0.585106;PAO=0;PQA=0;PQR=0;PRO=0;QA=507;QR=11215;RO=282;RPL=0;RPP=31.2394;RPPR=615.366;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=282;SRP=615.366;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1197:0:0:0,-9.0309,-108.007 0/0:42:42,0:42:1680:0:0:0,-12.6433,-151.424 0/0:43:43,0:43:1712:0:0:0,-12.9443,-154.301 0/1:71:64,7:64:2552:7:276:-3.83549,0,-208.443 0/0:54:51,3:51:2042:3:108:0,-6.18493,-173.898 0/0:55:52,3:52:2032:3:123:0,-5.09186,-171.602 dDocent_Contig_1792 4 . T A 2562.25 . AB=0.187919;ABP=129.058;AC=0;AF=0;AN=12;AO=28;CIGAR=1X1M1D1X3M;DP=250;DPB=244;DPRA=0;EPP=63.8115;EPPR=263.587;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1035;QR=4569;RO=120;RPL=0;RPP=63.8115;RPPR=263.587;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=120;SRP=263.587;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:52:25,12,0,14:25:948:12,0,14:443,0,528:-35.7487,-7.04373,-81.1639,-43.2744,-84.7762,-121.009,0,-41.506,-77.7373,-73.5229 0|0:46:24,9,2,11:24:915:9,2,11:333,72,420:-27.2404,-7.22546,-79.5821,-28.5919,-76.4178,-103.057,0,-47.8323,-69.1993,-71.7617 0|0:56:39,0,0,17:39:1477:0,0,17:0,0,658:-42.6995,-54.4397,-175.525,-54.4397,-175.525,-175.525,0,-121.469,-121.469,-116.352 0|0:51:17,7,5,22:17:655:7,5,22:259,178,852:-64.8898,-48.8205,-100.5,-55.5046,-88.1037,-107.785,0,-32.6101,-39.2948,-47.1745 0|0:21:10,0,0,11:10:381:0,0,11:0,0,427:-32.4635,-35.4738,-66.7249,-35.4738,-66.7249,-66.7249,0,-31.6352,-31.6352,-28.3239 0|0:24:5,0,0,19:5:193:0,0,19:0,0,712:-57.1804,-58.6855,-74.5385,-58.6855,-74.5385,-74.5385,0,-16.2363,-16.2363,-10.5168 dDocent_Contig_1793 1 . N G 66.6443 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=3.21888;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=70;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1794 1 . N G 5116.2 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=176;CIGAR=1X;DP=176;DPB=176;DPRA=0;EPP=273.26;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=46.6307;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0170455;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6122;QR=0;RO=0;RPL=0;RPP=385.189;RPPR=0;RPR=176;RUN=1;SAF=14;SAP=273.26;SAR=162;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:42:0,42:0:0:42:1475:-126.095,-12.6433,0 1/1:41:0,41:0:0:41:1414:-106.252,-12.3422,0 1/1:36:0,36:0:0:36:1248:-110.149,-10.8371,0 1/1:21:0,21:0:0:21:719:-59.5905,-6.32163,0 1/1:19:0,19:0:0:19:662:-55.3908,-5.71957,0 1/1:17:0,17:0:0:17:604:-53.3644,-5.11751,0 dDocent_Contig_1796 106 . N T 1114.02 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=35;CIGAR=2X;DP=35;DPB=35;DPRA=0;EPP=79.0118;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1215;QR=0;RO=0;RPL=0;RPP=79.0118;RPPR=0;RPR=35;RUN=1;SAF=0;SAP=79.0118;SAR=35;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:4:0,4:0:0:4:140:-12.9449,-1.20412,0 1|1:6:0,6:0:0:6:209:-19.1511,-1.80618,0 1|1:22:0,22:0:0:22:761:-68.8105,-6.62266,0 1|1:3:0,3:0:0:3:105:-9.79616,-0.90309,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_1797 98 . N A 3512.51 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=137;CIGAR=1X;DP=141;DPB=141;DPRA=0;EPP=300.502;EPPR=0;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.992701;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3882;QR=0;RO=0;RPL=137;RPP=300.502;RPPR=0;RPR=0;RUN=1;SAF=137;SAP=300.502;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:16:0,16:0:0:16:431:-39.0516,-4.81648,0 1/1:21:0,20:0:0:20:587:-53.0283,-6.0206,0 1/1:15:0,15:0:0:15:444:-40.2441,-4.51545,0 1/1:30:0,29:0:0:29:764:-68.6587,-8.72987,0 1/1:26:0,25:0:0:25:709:-63.9975,-7.52575,0 1/1:33:0,32:0:0:32:947:-85.4259,-9.63296,0 dDocent_Contig_1798 21 . G T 231.807 . AB=0.144068;ABP=132.857;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=458;DPB=458;DPRA=0.694118;EPP=39.9253;EPPR=960.63;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.411765;PAIREDR=0.526077;PAO=0;PQA=0;PQR=0;PRO=0;QA=680;QR=17577;RO=441;RPL=0;RPP=39.9253;RPPR=960.63;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=441;SRP=960.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:61:61,0:61:2462:0:0:0,-18.3628,-221.719 0/0:95:95,0:95:3760:0:0:0,-28.5978,-338.418 0/0:89:89,0:89:3583:0:0:0,-26.7917,-322.485 0/0:95:95,0:95:3769:0:0:0,-28.5978,-339.215 0/1:45:36,9:36:1441:9:367:-19.8487,0,-116.397 0/1:73:65,8:65:2562:8:313:-6.55388,0,-208.747 dDocent_Contig_1799 37 . T C 284.343 . AB=0.168224;ABP=105.313;AC=3;AF=0.25;AN=12;AO=21;CIGAR=1X;DP=249;DPB=249;DPRA=0.590476;EPP=48.6112;EPPR=498.106;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.238095;PAIREDR=0.482456;PAO=0;PQA=0;PQR=0;PRO=0;QA=836;QR=8558;RO=228;RPL=0;RPP=48.6112;RPPR=498.106;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=228;SRP=498.106;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:25,7:25:911:7:282:-16.1196,0,-72.6584 0/0:40:39,1:39:1425:1:38:0,-8.24393,-124.716 0/1:30:27,3:27:1029:3:123:-2.43389,0,-83.8791 0/1:45:37,8:37:1415:8:314:-15.0768,0,-114.076 0/0:39:37,2:37:1387:2:79:0,-4.24293,-117.597 0/0:63:63,0:63:2391:0:0:0,-18.9649,-215.377 dDocent_Contig_1800 46 . A G 136.166 . AB=0.103175;ABP=347.688;AC=2;AF=0.166667;AN=12;AO=40;CIGAR=1X;DP=919;DPB=919;DPRA=0.735215;EPP=89.8692;EPPR=1909.56;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.9;PAIREDR=0.936219;PAO=0;PQA=0;PQR=0;PRO=0;QA=1577;QR=34540;RO=878;RPL=0;RPP=89.8692;RPPR=1909.56;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=878;SRP=1909.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:120:105,14:105:4136:14:541:-13.1137,0,-336.328 0/0:174:166,8:166:6550:8:315:0,-23.6635,-560.539 0/0:121:115,6:115:4551:6:242:0,-14.2677,-387.381 0/1:132:120,12:120:4690:12:479:-3.72342,0,-382.313 0/0:115:115,0:115:4537:0:0:0,-34.6184,-408.289 0/0:257:257,0:257:10076:0:0:0,-77.3647,-906.263 dDocent_Contig_1802 67 . C G 78.507 . AB=0.120879;ABP=116.619;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=4M1X19M;DP=388;DPB=387.792;DPRA=1.34483;EPP=31.2394;EPPR=791.255;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.834711;PAO=0;PQA=0;PQR=0;PRO=0;QA=471;QR=12699;RO=363;RPL=6;RPP=3.17734;RPPR=3.73412;RPR=7;RUN=1;SAF=6;SAP=3.17734;SAR=7;SRF=176;SRP=3.73412;SRR=187;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:91:78,0,11:78:2675:0,11:0,397:-9.07247,-32.5528,-249.737,0,-217.335,-214.024 0|0:65:63,0,2:63:2230:0,2:0,74:0,-18.9649,-200.597,-12.5415,-194.543,-193.941 0|0:32:32,0,0:32:1117:0,0:0,0:0,-9.63296,-100.836,-9.63296,-100.836,-100.836 0|0:92:92,0,0:92:3200:0,0:0,0:0,-27.6948,-288.227,-27.6948,-288.227,-288.227 0|0:50:46,0,0:46:1640:0,0:0,0:0,-13.8474,-147.597,-13.8474,-147.597,-147.597 0|0:58:52,5,0:52:1837:5,0:180,0:0,-0.998044,-149.062,-15.6536,-150.567,-165.248 dDocent_Contig_1803 9 . A G 10430 . AB=0.0588235;ABP=664.032;AC=0;AF=0;AN=12;AO=23;CIGAR=1X3M1X;DP=534;DPB=534;DPRA=1.30333;EPP=52.9542;EPPR=283.13;GTI=0;LEN=1;MEANALT=4.25;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.984496;PAO=0;PQA=0;PQR=0;PRO=0;QA=899;QR=4987;RO=129;RPL=0;RPP=52.9542;RPPR=283.13;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=129;SRP=283.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:68:28,7,8,24:28:1096:7,8,24:274,320,968:-71.3672,-57.2685,-145.274,-53.4373,-121.022,-141.143,0,-67.5855,-63.7542,-82.8899 0|0:127:38,2,7,74:38:1472:2,7,74:77,281,2930:-229.697,-234.814,-355.131,-217.982,-332.58,-336.794,0,-114.593,-97.7606,-98.639 0|0:76:23,3,5,44:23:878:3,5,44:120,196,1728:-135.175,-132.213,-203.336,-125.982,-188.121,-196.502,0,-62.1325,-55.9009,-58.7739 0|0:120:34,11,16,57:34:1318:11,16,57:428,645,2266:-176.322,-151.385,-256.348,-133.391,-206.492,-236.849,0,-73.0994,-55.1033,-91.1135 0|0:75:0,0,1,73:0:0:0,1,73:0,40,2839:-255.231,-255.231,-255.231,-251.936,-251.936,-251.635,-21.9752,-21.9752,-18.6801,0 0|0:68:6,0,7,55:6:223:0,7,55:0,281,2201:-184.433,-186.239,-204.487,-163.085,-181.332,-179.225,-4.93386,-23.1703,0,-6.61363 dDocent_Contig_1804 10 . G A 67.6964 . AB=0.142857;ABP=49.5419;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=180;DPB=180;DPRA=0.732877;EPP=20.3821;EPPR=376.504;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.813953;PAO=0;PQA=0;PQR=0;PRO=0;QA=325;QR=6856;RO=172;RPL=0;RPP=20.3821;RPPR=376.504;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=172;SRP=376.504;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:26,1:26:1044:1:41:0,-4.03324,-90.1572 0/0:40:40,0:40:1580:0:0:0,-12.0412,-142.436 0/0:38:37,1:37:1488:1:41:0,-7.34457,-130.067 0/0:33:33,0:33:1302:0:0:0,-9.93399,-117.448 0/1:22:18,4:18:731:4:161:-8.25282,0,-59.4903 0/1:20:18,2:18:711:2:82:-1.75908,0,-58.2902 dDocent_Contig_1805 28 . G A 310.163 . AB=0.131313;ABP=236.784;AC=2;AF=0.166667;AN=12;AO=35;CIGAR=1X;DP=545;DPB=545;DPRA=1.53016;EPP=79.0118;EPPR=1110.46;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.907843;PAO=0;PQA=0;PQR=0;PRO=0;QA=1389;QR=20184;RO=510;RPL=0;RPP=79.0118;RPPR=1110.46;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=510;SRP=1110.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:73:65,8:65:2582:8:318:-7.01143,0,-210.549 0/1:125:107,18:107:4235:18:717:-27.2267,0,-343.498 0/0:63:63,0:63:2520:0:0:0,-18.9649,-226.94 0/0:99:92,7:92:3625:7:272:0,-4.95803,-301.436 0/0:91:90,1:90:3510:1:41:0,-23.2992,-311.857 0/0:94:93,1:93:3712:1:41:0,-24.2023,-330.005 dDocent_Contig_1806 10 . G A 1008.58 . AB=0.145969;ABP=502.709;AC=2;AF=0.166667;AN=12;AO=67;CIGAR=1X;DP=965;DPB=965;DPRA=1.81423;EPP=148.499;EPPR=1935.62;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996629;PAO=0;PQA=0;PQR=0;PRO=0;QA=2667;QR=35254;RO=890;RPL=0;RPP=148.499;RPPR=1935.62;RPR=67;RUN=1;SAF=67;SAP=148.499;SAR=0;SRF=890;SRP=1935.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:129:128,0:128:5046:0:0:0,-38.5318,-453.623 0/0:89:89,0:89:3540:0:0:0,-26.7917,-318.641 0/0:81:81,0:81:3231:0:0:0,-24.3834,-290.859 0/0:207:207,0:207:8221:0:0:0,-62.3132,-739.468 0/1:225:193,32:193:7629:32:1269:-46.7438,0,-618.505 0/1:234:192,35:192:7587:35:1398:-57.3364,0,-613.731 dDocent_Contig_1807 98 . N T 6736.17 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=217;CIGAR=1X;DP=217;DPB=217;DPRA=0;EPP=474.22;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=7455;QR=0;RO=0;RPL=217;RPP=474.22;RPPR=0;RPR=0;RUN=1;SAF=217;SAP=474.22;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:51:0,51:0:0:51:1755:-158.237,-15.3525,0 1/1:62:0,62:0:0:62:2146:-193.415,-18.6639,0 1/1:20:0,20:0:0:20:688:-62.2417,-6.0206,0 1/1:80:0,80:0:0:80:2727:-245.682,-24.0824,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:3:0,3:0:0:3:105:-9.79594,-0.90309,0 dDocent_Contig_1808 55 . A T 125.936 . AB=0.133333;ABP=125.626;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=881;DPB=881;DPRA=0.719136;EPP=46.4397;EPPR=1872.65;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990708;PAO=0;PQA=0;PQR=0;PRO=0;QA=730;QR=32126;RO=861;RPL=20;RPP=46.4397;RPPR=1872.65;RPR=0;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=861;SRP=1872.65;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:105:91,14:91:3271:14:501:-13.8154,0,-262.99 0/0:120:120,0:120:4321:0:0:0,-36.1236,-389.049 0/0:76:76,0:76:2826:0:0:0,-22.8783,-254.522 0/0:128:122,6:122:4558:6:229:0,-17.5563,-389.324 0/0:253:253,0:253:9587:0:0:0,-76.1606,-862.554 0/0:199:199,0:199:7563:0:0:0,-59.905,-680.517 dDocent_Contig_1809 21 . T A 41669.8 . AB=0.770428;ABP=656.007;AC=8;AF=0.666667;AN=12;AO=1269;CIGAR=1X;DP=1517;DPB=1517;DPRA=0;EPP=2758.61;EPPR=539.364;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998424;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=50301;QR=9848;RO=247;RPL=0;RPP=2758.61;RPPR=539.364;RPR=1269;RUN=1;SAF=1269;SAP=2758.61;SAR=0;SRF=247;SRP=539.364;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:201:34,167:34:1343:167:6577:-531.169,0,-60.621 0/1:222:46,176:46:1823:176:6977:-560.783,0,-97.453 0/1:343:79,264:79:3157:264:10512:-842.148,0,-180.949 0/1:262:77,185:77:3081:185:7302:-577.973,0,-198.497 1/1:264:1,262:1:41:262:10380:-929.462,-75.4858,0 1/1:225:10,215:10:403:215:8553:-732.667,-31.1024,0 dDocent_Contig_1810 20 . C T 40.7762 . AB=0.107143;ABP=78.0812;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=499;DPB=499;DPRA=1.66957;EPP=29.068;EPPR=1060.52;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.681725;PAO=0;PQA=0;PQR=0;PRO=0;QA=486;QR=19394;RO=487;RPL=0;RPP=29.068;RPPR=1060.52;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=487;SRP=1060.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:56:50,6:50:1962:6:242:-5.29943,0,-159.926 0/0:55:55,0:55:2212:0:0:0,-16.5566,-199.244 0/0:60:60,0:60:2379:0:0:0,-18.0618,-214.258 0/0:76:72,4:72:2869:4:163:0,-7.81985,-243.256 0/0:119:118,1:118:4701:1:41:0,-31.728,-418.901 0/0:133:132,1:132:5271:1:40:0,-36.0413,-470.234 dDocent_Contig_1812 9 . A T 38.4954 . AB=0.0935961;ABP=294.234;AC=1;AF=0.0833333;AN=12;AO=23;CIGAR=1X;DP=1227;DPB=1227;DPRA=1.2332;EPP=52.9542;EPPR=2610.95;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.992506;PAO=0;PQA=0;PQR=0;PRO=0;QA=891;QR=45670;RO=1201;RPL=0;RPP=52.9542;RPPR=2610.95;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=1201;SRP=2610.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:200:199,0:199:7588:0:0:0,-59.905,-682.665 0/0:265:261,4:261:9902:4:156:0,-65.3557,-876.452 0/0:107:107,0:107:4081:0:0:0,-32.2102,-367.379 0/0:275:273,0:273:10364:0:0:0,-82.1812,-932.106 0/0:177:177,0:177:6753:0:0:0,-53.2823,-607.674 0/1:203:184,19:184:6982:19:735:-5.37236,0,-567.154 dDocent_Contig_1813 28 . G A 39.0264 . AB=0.125;ABP=42.0968;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=299;DPB=299;DPRA=0.599251;EPP=11.6962;EPPR=643.595;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99661;PAO=0;PQA=0;PQR=0;PRO=0;QA=163;QR=11641;RO=295;RPL=0;RPP=11.6962;RPPR=643.595;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=295;SRP=643.595;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:44,0:44:1730:0:0:0,-13.2453,-155.921 0/0:42:42,0:42:1665:0:0:0,-12.6433,-150.087 0/0:36:36,0:36:1418:0:0:0,-10.8371,-127.878 0/0:81:81,0:81:3202:0:0:0,-24.3834,-288.258 0/1:32:28,4:28:1104:4:163:-5.42547,0,-90.0165 0/0:64:64,0:64:2522:0:0:0,-19.2659,-227.133 dDocent_Contig_1814 26 . T C 3012.83 . AB=0.126459;ABP=2494.81;AC=3;AF=0.25;AN=12;AO=325;CIGAR=1X;DP=3798;DPB=3798;DPRA=0;EPP=708.739;EPPR=7540.19;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=12854;QR=136116;RO=3471;RPL=0;RPP=708.739;RPPR=7540.19;RPR=325;RUN=1;SAF=325;SAP=708.739;SAR=0;SRF=3471;SRP=7540.19;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:543:533,10:533:20872:10:372:0,-129.647,-1843.04 0/0:619:600,18:600:23486:18:707:0,-122.456,-2047.93 0/0:580:543,37:543:21353:37:1493:0,-39.9841,-1785.44 0/1:643:585,58:585:22993:58:2322:-15.574,0,-1873.96 0/1:655:537,117:537:21078:117:4595:-216.218,0,-1698.08 0/1:758:673,85:673:26334:85:3365:-74.7128,0,-2139.73 dDocent_Contig_1815 34 . T G 229.886 . AB=0.119048;ABP=267.723;AC=1;AF=0.0833333;AN=12;AO=51;CIGAR=1X;DP=1366;DPB=1366;DPRA=1.34097;EPP=113.755;EPPR=2847.64;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.461832;PAO=0;PQA=0;PQR=0;PRO=0;QA=2013;QR=45817;RO=1310;RPL=0;RPP=113.755;RPPR=2847.64;RPR=51;RUN=1;SAF=51;SAP=113.755;SAR=0;SRF=1310;SRP=2847.64;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:210:184,25:184:6414:25:966:-24.2104,0,-514.304 0/0:340:326,12:326:11390:12:486:0,-57.9758,-980.828 0/0:160:156,3:156:5556:3:121:0,-36.752,-488.913 0/0:285:274,11:274:9538:11:440:0,-45.8401,-818.36 0/0:167:166,0:166:5697:0:0:0,-49.971,-512.642 0/0:204:204,0:204:7222:0:0:0,-61.4101,-649.974 dDocent_Contig_1816 37 . G T 438.005 . AB=0.165644;ABP=161.288;AC=4;AF=0.333333;AN=12;AO=34;CIGAR=1X;DP=278;DPB=278;DPRA=0;EPP=76.8404;EPPR=530.678;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.823529;PAIREDR=0.925926;PAO=0;PQA=0;PQR=0;PRO=0;QA=1373;QR=9698;RO=243;RPL=0;RPP=76.8404;RPPR=530.678;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=243;SRP=530.678;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:38,4:38:1517:4:154:-1.58616,0,-124.129 0/1:39:35,4:35:1383:4:163:-3.31826,0,-112.982 0/0:61:58,3:58:2317:3:123:0,-6.89804,-197.223 0/1:44:34,10:34:1354:10:408:-23.8353,0,-108.871 0/1:38:28,9:28:1121:9:366:-21.8385,0,-89.7099 0/0:54:50,4:50:2006:4:159:0,-1.56479,-166.034 dDocent_Contig_1817 36 . C T 1237.54 . AB=0.179837;ABP=329.767;AC=1;AF=0.0833333;AN=12;AO=69;CIGAR=1X;DP=3208;DPB=3208;DPRA=1.10914;EPP=152.842;EPPR=6819.26;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.981841;PAO=0;PQA=0;PQR=0;PRO=0;QA=2686;QR=124883;RO=3139;RPL=0;RPP=152.842;RPPR=6819.26;RPR=69;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=3139;SRP=6819.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:225:225,0:225:8931:0:0:0,-67.7317,-803.286 0/1:367:301,66:301:11978:66:2618:-125.277,0,-966.716 0/0:275:274,1:274:10834:1:9:0,-81.8832,-973.445 0/0:305:305,0:305:12109:0:0:0,-91.8141,-1088.97 0/0:1045:1043,2:1043:41523:2:59:0,-308.975,-3727.6 0/0:991:991,0:991:39508:0:0:0,-298.321,-3552.06 dDocent_Contig_1818 19 . C A 5403.33 . AB=0.317293;ABP=195.827;AC=6;AF=0.5;AN=12;AO=211;CIGAR=1X;DP=665;DPB=665;DPRA=0;EPP=461.191;EPPR=988.859;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.995595;PAO=0;PQA=0;PQR=0;PRO=0;QA=8336;QR=18041;RO=454;RPL=0;RPP=461.191;RPPR=988.859;RPR=211;RUN=1;SAF=211;SAP=461.191;SAR=0;SRF=454;SRP=988.859;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:113:61,52:61:2426:52:2078:-153.187,0,-184.478 0/1:93:66,27:66:2604:27:1062:-67.862,0,-206.493 0/1:138:97,41:97:3850:41:1631:-105.474,0,-304.951 0/1:75:43,32:43:1711:32:1278:-92.7149,0,-131.634 0/1:135:109,26:109:4313:26:998:-49.4655,0,-347.487 0/1:111:78,33:78:3137:33:1289:-82.8521,0,-248.978 dDocent_Contig_1819 98 . N C 172.45 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=169;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_1820 20 . G C 4844.31 . AB=0.132316;ABP=3313.24;AC=6;AF=0.5;AN=12;AO=373;CIGAR=1X;DP=2819;DPB=2819;DPRA=0;EPP=812.97;EPPR=5297.06;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997319;PAIREDR=0.997539;PAO=0;PQA=0;PQR=0;PRO=0;QA=14923;QR=97171;RO=2438;RPL=0;RPP=812.97;RPPR=5297.06;RPR=373;RUN=1;SAF=373;SAP=812.97;SAR=0;SRF=2438;SRP=5297.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:461:402,58:402:16024:58:2314:-69.5285,0,-1301.99 0/1:685:620,64:620:24711:64:2559:-24.1213,0,-2015.46 0/1:318:265,52:265:10551:52:2082:-91.7273,0,-853.037 0/1:648:586,60:586:23399:60:2405:-21.7199,0,-1908.96 0/1:283:237,46:237:9428:46:1822:-78.9974,0,-762.742 0/1:424:328,93:328:13058:93:3741:-209.559,0,-1047.12 dDocent_Contig_1821 7 . T A 368.533 . AB=0.192661;ABP=92.4391;AC=2;AF=0.166667;AN=12;AO=32;CIGAR=1X;DP=329;DPB=329;DPRA=1.33023;EPP=72.4974;EPPR=647.938;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9461;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.922559;PAO=0;PQA=0;PQR=0;PRO=0;QA=1223;QR=11191;RO=297;RPL=0;RPP=72.4974;RPPR=647.938;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=297;SRP=647.938;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:44,4:44:1614:4:151:0,-0.49209,-131.562 0/0:80:77,3:77:2931:3:116:0,-13.2647,-253.146 0/0:43:43,0:43:1619:0:0:0,-12.9443,-145.973 0/0:49:45,4:45:1711:4:154:0,-0.517011,-139.999 0/1:69:57,12:57:2146:12:460:-20.9791,0,-172.597 0/1:40:31,9:31:1170:9:342:-19.0956,0,-93.5525 dDocent_Contig_1822 190 . C T 681.444 . AB=0.180328;ABP=219.588;AC=4;AF=0.333333;AN=12;AO=44;CIGAR=1X;DP=374;DPB=374;DPRA=0.938462;EPP=98.5551;EPPR=719.596;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990909;PAO=0;PQA=0;PQR=0;PRO=0;QA=1621;QR=13131;RO=330;RPL=44;RPP=98.5551;RPPR=719.596;RPR=0;RUN=1;SAF=0;SAP=98.5551;SAR=44;SRF=0;SRP=719.596;SRR=330;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:46:46,0:46:1827:0:0:0,-13.8474,-164.634 0/1:75:68,7:68:2658:7:252:-0.443714,0,-216.768 0/1:45:34,11:34:1370:11:407:-23.429,0,-110.007 0/1:56:38,18:38:1507:18:666:-43.4123,0,-119.012 0/1:68:60,8:60:2402:8:296:-6.52299,0,-195.856 0/0:84:84,0:84:3367:0:0:0,-25.2865,-303.069 dDocent_Contig_1823 9 . A T 731.211 . AB=0.196172;ABP=170.588;AC=4;AF=0.333333;AN=12;AO=44;CIGAR=1X;DP=290;DPB=290;DPRA=1.08889;EPP=98.5551;EPPR=537.193;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.704545;PAIREDR=0.621951;PAO=0;PQA=0;PQR=0;PRO=0;QA=1692;QR=9374;RO=246;RPL=0;RPP=98.5551;RPPR=537.193;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=246;SRP=537.193;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:33,3:33:1269:3:116:0,-0.0193751,-103.684 0/1:67:50,17:50:1912:17:658:-39.3881,0,-152.157 0/1:31:27,4:27:1018:4:151:-4.62542,0,-82.5953 0/0:45:45,0:45:1715:0:0:0,-13.5463,-154.611 0/1:49:36,13:36:1351:13:495:-30.1452,0,-107.121 0/1:62:55,7:55:2109:7:272:-6.18337,0,-171.374 dDocent_Contig_1824 98 . N T 227.007 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=231;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:4:0,4:0:0:4:114:-10.5417,-1.20412,0 dDocent_Contig_1825 25 . G A 110.338 . AB=0.117188;ABP=165.939;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=786;DPB=786;DPRA=0.972644;EPP=35.5824;EPPR=1677.22;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.967575;PAO=0;PQA=0;PQR=0;PRO=0;QA=564;QR=29969;RO=771;RPL=0;RPP=35.5824;RPPR=1677.22;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=771;SRP=1677.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:116:116,0:116:4464:0:0:0,-34.9195,-401.791 0/0:166:166,0:166:6439:0:0:0,-49.971,-579.362 0/0:69:69,0:69:2675:0:0:0,-20.7711,-240.919 0/0:122:122,0:122:4751:0:0:0,-36.7257,-427.568 0/1:128:113,15:113:4390:15:564:-12.5567,0,-356.592 0/0:185:185,0:185:7250:0:0:0,-55.6905,-652.245 dDocent_Contig_1826 1 . N G 97.4391 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=39.3333;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=115;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:74:-5.34667,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_1827 106 . N A 248.116 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=8;CIGAR=2X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=10.1503;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=272;QR=0;RO=0;RPL=0;RPP=20.3821;RPPR=0;RPR=8;RUN=1;SAF=0;SAP=20.3821;SAR=8;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:8:0,8:0:0:8:272:-24.8116,-2.40824,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_1828 42 . A G 624.897 . AB=0.230159;ABP=82.6999;AC=2;AF=0.166667;AN=12;AO=29;CIGAR=1X;DP=373;DPB=373;DPRA=1.02024;EPP=65.983;EPPR=749.997;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.551724;PAIREDR=0.633721;PAO=0;PQA=0;PQR=0;PRO=0;QA=1144;QR=13511;RO=344;RPL=0;RPP=65.983;RPPR=749.997;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=344;SRP=749.997;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:56:56,0:56:2198:0:0:0,-16.8577,-198.002 0/0:71:71,0:71:2786:0:0:0,-21.3731,-250.876 0/0:43:43,0:43:1678:0:0:0,-12.9443,-151.256 0/0:77:77,0:77:3029:0:0:0,-23.1793,-272.726 0/1:55:48,7:48:1878:7:276:-8.6509,0,-152.687 0/1:71:49,22:49:1942:22:868:-57.0606,0,-153.619 dDocent_Contig_1829 29 . T C 2677.38 . AB=0.15157;ABP=1178.78;AC=6;AF=0.5;AN=12;AO=169;CIGAR=1X;DP=1115;DPB=1115;DPRA=0;EPP=369.989;EPPR=2057.22;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998943;PAO=0;PQA=0;PQR=0;PRO=0;QA=6795;QR=37690;RO=946;RPL=0;RPP=369.989;RPPR=2057.22;RPR=169;RUN=1;SAF=169;SAP=369.989;SAR=0;SRF=946;SRP=2057.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:139:116,23:116:4599:23:930:-42.1594,0,-371.987 0/1:175:140,35:140:5567:35:1418:-75.1867,0,-448.179 0/1:245:199,46:199:7944:46:1822:-90.4355,0,-640.776 0/1:185:165,20:165:6571:20:802:-16.8063,0,-535.426 0/1:166:138,28:138:5515:28:1134:-52.369,0,-446.213 0/1:205:188,17:188:7494:17:689:-0.628334,0,-612.365 dDocent_Contig_1830 127 . G A 63.0455 . AB=0.235294;ABP=13.3567;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=106;DPB=106;DPRA=0.955056;EPP=11.6962;EPPR=224.5;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=140;QR=3405;RO=102;RPL=0;RPP=11.6962;RPPR=224.5;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=224.5;SRR=102;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:6:6,0:6:208:0:0:0,-1.80618,-19.0596 0/1:17:13,4:13:451:4:140:-7.82742,0,-35.8042 0/0:21:21,0:21:674:0:0:0,-6.32163,-60.9597 0/0:21:21,0:21:716:0:0:0,-6.32163,-64.7583 0/0:24:24,0:24:804:0:0:0,-7.22472,-72.6682 0/0:17:17,0:17:552:0:0:0,-5.11751,-49.989 dDocent_Contig_1831 198 . G A 2538.6 . AB=0.0555556;ABP=64.7766;AC=0;AF=0;AN=12;AO=2;CIGAR=1X3M1X;DP=203;DPB=203;DPRA=0;EPP=7.35324;EPPR=174.557;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.835443;PAO=0;PQA=0;PQR=0;PRO=0;QA=73;QR=2916;RO=79;RPL=2;RPP=7.35324;RPPR=174.557;RPR=0;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=174.557;SRR=79;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:20:4,0,14,1:4:148:0,14,1:0,511,35:-40.564,-41.7681,-53.8774,0,-12.1244,-7.90996,-38.9212,-51.0304,-9.27896,-50.7294 0|0:40:10,0,24,6:10:366:0,24,6:0,874,220:-68.3802,-71.3905,-101.3,0,-29.9091,-22.6844,-53.4072,-83.3172,-11.926,-81.5111 0|0:36:17,2,13,4:17:628:2,13,4:73,439,146:-30.4407,-29.5916,-80.3682,0,-45.4051,-47.4559,-23.6245,-69.0404,-39.4412,-73.8013 0|0:29:14,0,14,1:14:524:0,14,1:0,506,35:-37.0985,-41.3129,-84.2346,0,-42.9377,-38.7232,-38.4659,-81.3874,-40.0915,-81.0864 0|0:37:13,0,21,2:13:486:0,21,2:0,771,74:-59.1136,-63.027,-102.827,0,-39.8006,-33.479,-56.9728,-96.7727,-33.747,-96.1706 0|0:41:21,0,12,6:21:764:0,12,6:0,438,214:-29.4849,-35.8066,-98.2076,0,-62.4182,-58.8059,-18.3594,-80.7628,-44.9727,-78.9566 dDocent_Contig_1832 15 . T C 43234.9 . AB=0.0399709;ABP=5061.64;AC=0;AF=0;AN=12;AO=110;CIGAR=2M1D1M1X3M;DP=2752;DPB=2524.5;DPRA=0;EPP=241.872;EPPR=1318.92;GTI=0;LEN=1;MEANALT=9.83333;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.993399;PAO=0;PQA=0;PQR=0;PRO=0;QA=4419;QR=23972;RO=606;RPL=0;RPP=241.872;RPPR=1318.92;RPR=110;RUN=1;SAF=110;SAP=241.872;SAR=0;SRF=606;SRP=1318.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:350:60,15,216,11,36:60:2387:15,216,11,36:595,8388,431,1442:-671.078,-640.162,-832.189,0,-147.565,-131.521,-653.701,-801.266,-161.105,-846.932,-570.348,-717.912,-77.7507,-731.452,-756.053 0|0:574:139,13,314,38,47:139:5524:13,314,38,47:520,12187,1515,1868:-959.362,-958.371,-1409.25,0,-411.955,-360.266,-876.446,-1288.4,-330.031,-1319.8,-847.417,-1259.37,-301.002,-1177.45,-1288.06 0|0:250:36,9,145,22,23:36:1425:9,145,22,23:365,5623,874,910:-451.06,-431.796,-546.363,0,-87.1739,-73.6261,-389.948,-477.123,-45.3268,-500.602,-387.014,-474.19,-42.3936,-432.342,-497.367 0|0:420:103,11,206,21,61:103:4078:11,206,21,61:441,7969,829,2418:-623.468,-618.141,-950.462,0,-299.297,-273.619,-586.262,-885.561,-267.419,-915.573,-455.457,-754.757,-136.615,-722.878,-772.728 0|0:607:144,29,306,38,52:144:5633:29,306,38,52:1168,11826,1499,2061:-927.799,-874.881,-1329.28,0,-366.858,-371.01,-847.821,-1214.68,-339.799,-1299.51,-801.529,-1168.39,-293.507,-1141.33,-1249 0|0:551:124,33,231,42,81:124:4925:33,231,42,81:1330,8996,1633,3247:-701.948,-629.651,-1025.17,0,-295.83,-335.918,-605.102,-900.932,-271.282,-997.914,-471.766,-767.597,-137.945,-743.047,-852.838 dDocent_Contig_1833 32 . T A 227.196 . AB=0.126582;ABP=194.375;AC=1;AF=0.0833333;AN=12;AO=41;CIGAR=1X;DP=1137;DPB=1137;DPRA=0;EPP=92.0407;EPPR=2380.77;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995434;PAO=0;PQA=0;PQR=0;PRO=0;QA=1636;QR=43687;RO=1095;RPL=0;RPP=92.0407;RPPR=2380.77;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=1095;SRP=2380.77;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:158:138,20:138:5557:20:791:-23.9415,0,-452.37 0/0:162:157,5:157:6208:5:202:0,-30.2054,-539.911 0/0:97:95,2:95:3800:2:81:0,-21.5142,-334.316 0/0:153:147,6:147:5889:6:244:0,-23.7188,-507.44 0/0:306:301,5:301:12045:5:196:0,-74.1021,-1065.15 0/0:261:257,3:257:10188:3:122:0,-67.3039,-904.897 dDocent_Contig_1834 33 . C T 2740.53 . AB=0.112264;ABP=3527.45;AC=3;AF=0.25;AN=12;AO=412;CIGAR=1X;DP=4736;DPB=4736;DPRA=0;EPP=897.657;EPPR=9388.11;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=16490;QR=172994;RO=4322;RPL=0;RPP=897.657;RPPR=9388.11;RPR=412;RUN=1;SAF=412;SAP=897.657;SAR=0;SRF=4322;SRP=9388.11;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:430:358,72:358:14321:72:2897:-131.379,0,-1158.35 0/0:566:529,37:529:21156:37:1474:0,-37.4787,-1769.31 0/0:635:607,28:607:24267:28:1127:0,-89.4425,-2080.15 0/1:1034:919,114:919:36974:114:4567:-99.7329,0,-3012.87 0/0:836:792,44:792:31609:44:1757:0,-93.3163,-2683.54 0/1:1235:1117,117:1117:44667:117:4668:-48.163,0,-3643.82 dDocent_Contig_1835 15 . G A 1491.51 . AB=0.105364;ABP=2827.49;AC=2;AF=0.166667;AN=12;AO=329;CIGAR=1X;DP=4897;DPB=4897;DPRA=1.28845;EPP=717.425;EPPR=9917.95;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=59.998;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999781;PAO=0;PQA=0;PQR=0;PRO=0;QA=12989;QR=181549;RO=4566;RPL=0;RPP=717.425;RPPR=9917.95;RPR=329;RUN=1;SAF=329;SAP=717.425;SAR=0;SRF=4566;SRP=9917.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:829:789,39:789:31497:39:1522:0,-112.447,-2694.6 0/1:1139:1020,119:1020:40543:119:4726:-82.3739,0,-3302.23 0/0:602:564,38:564:22458:38:1505:0,-45.5231,-1883.56 0/1:949:848,101:848:33617:101:3952:-69.9994,0,-2736.79 0/0:658:657,0:657:26160:0:0:0,-197.777,-2351.7 0/0:720:688,32:688:27274:32:1284:0,-100.916,-2336.42 dDocent_Contig_1836 88 . T C 304.466 . AB=0.107732;ABP=1541.36;AC=3;AF=0.25;AN=12;AO=133;CIGAR=1X;DP=2077;DPB=2077;DPRA=1.07423;EPP=291.816;EPPR=4222.18;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999485;PAO=0;PQA=0;PQR=0;PRO=0;QA=4544;QR=65937;RO=1943;RPL=133;RPP=291.816;RPPR=4222.18;RPR=0;RUN=1;SAF=133;SAP=291.816;SAR=0;SRF=1943;SRP=4222.18;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:348:343,5:343:11674:5:175:0,-88.6647,-1034.53 0/1:466:416,49:416:14142:49:1672:-10.6937,0,-1132.6 0/1:296:264,32:264:8943:32:1084:-8.75975,0,-715.826 0/1:389:346,43:346:11697:43:1478:-16.215,0,-935.606 0/0:326:326,0:326:11016:0:0:0,-98.1358,-991.436 0/0:252:248,4:248:8465:4:135:0,-63.3763,-749.437 dDocent_Contig_1837 98 . N C 42678.6 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=1530;CIGAR=1X;DP=1532;DPB=1532;DPRA=0;EPP=3325.36;EPPR=0;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=2.1684e-19;PAIRED=0.999346;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=47405;QR=0;RO=0;RPL=1530;RPP=3325.36;RPPR=0;RPR=0;RUN=1;SAF=1530;SAP=3325.36;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:206:0,206:0:0:206:6309:-567.981,-62.0122,0 1/1:119:0,119:0:0:119:3736:-336.464,-35.8226,0 1/1:152:0,152:0:0:152:4729:-425.806,-45.7566,0 1/1:131:0,131:0:0:131:4034:-363.279,-39.4349,0 1/1:400:0,399:0:0:399:12368:-1113.06,-120.111,0 1/1:524:0,523:0:0:523:16229:-1460.49,-157.439,0 dDocent_Contig_1838 76 . A C 38.2196 . AB=0.117021;ABP=122.765;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=289;DPB=289;DPRA=1.30625;EPP=39.9253;EPPR=593.651;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.882353;PAIREDR=0.727941;PAO=0;PQA=0;PQR=0;PRO=0;QA=594;QR=9105;RO=272;RPL=9;RPP=3.13803;RPPR=4.1599;RPR=8;RUN=1;SAF=9;SAP=3.13803;SAR=8;SRF=142;SRP=4.1599;SRR=130;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:37,5:37:1256:5:175:-3.45044,0,-100.698 0/0:40:40,0:40:1358:0:0:0,-12.0412,-122.517 0/1:52:46,6:46:1554:6:210:-3.5889,0,-124.493 0/0:35:33,2:33:1077:2:69:0,-3.98339,-90.6712 0/0:40:40,0:40:1345:0:0:0,-12.0412,-121.345 0/0:80:76,4:76:2515:4:140:0,-11.1375,-213.658 dDocent_Contig_1839 58 . T C 679.608 . AB=0.133838;ABP=464.174;AC=2;AF=0.166667;AN=12;AO=73;CIGAR=1X;DP=1129;DPB=1129;DPRA=0.83105;EPP=161.528;EPPR=2296.09;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.996212;PAO=0;PQA=0;PQR=0;PRO=0;QA=2901;QR=42196;RO=1056;RPL=73;RPP=161.528;RPPR=2296.09;RPR=0;RUN=1;SAF=73;SAP=161.528;SAR=0;SRF=1056;SRP=2296.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:190:170,20:170:6749:20:796:-14.7601,0,-549.919 0/1:206:173,33:173:6942:33:1313:-56.4225,0,-562.43 0/0:83:82,1:82:3266:1:41:0,-20.8909,-289.903 0/0:205:196,9:196:7830:9:357:0,-29.2191,-671.786 0/0:219:219,0:219:8752:0:0:0,-65.9256,-787.166 0/0:226:216,10:216:8657:10:394:0,-32.2168,-742.787 dDocent_Contig_1840 18 . G T 207.147 . AB=0.173913;ABP=66.7383;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=288;DPB=288;DPRA=1.57534;EPP=29.068;EPPR=597.994;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.99635;PAO=0;PQA=0;PQR=0;PRO=0;QA=474;QR=10786;RO=274;RPL=0;RPP=29.068;RPPR=597.994;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=274;SRP=597.994;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:45:45,0:45:1737:0:0:0,-13.5463,-156.541 0/0:49:48,0:48:1936:0:0:0,-14.4494,-174.104 0/0:13:12,0:12:466:0:0:0,-3.61236,-41.8747 0/0:44:44,0:44:1732:0:0:0,-13.2453,-156.107 0/1:69:57,12:57:2269:12:474:-22.2376,0,-183.612 0/0:68:68,0:68:2646:0:0:0,-20.47,-238.274 dDocent_Contig_1841 98 . N G 4969.35 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=169;CIGAR=1X;DP=172;DPB=172;DPRA=0;EPP=369.989;EPPR=0;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5497;QR=0;RO=0;RPL=169;RPP=369.989;RPPR=0;RPR=0;RUN=1;SAF=169;SAP=369.989;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:87:-8.11888,-0.90309,0 1/1:3:0,3:0:0:3:92:-8.58501,-0.90309,0 1/1:2:0,1:0:0:1:35:-3.2887,-0.30103,0 1/1:3:0,3:0:0:3:86:-8.02461,-0.90309,0 1/1:27:0,26:0:0:26:806:-72.7506,-7.82678,0 1/1:134:0,133:0:0:133:4391:-395.322,-40.037,0 dDocent_Contig_1842 36 . C T 588.146 . AB=0.257732;ABP=52.4617;AC=2;AF=0.166667;AN=12;AO=25;CIGAR=1X;DP=222;DPB=222;DPRA=1.552;EPP=57.2971;EPPR=430.79;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994924;PAO=0;PQA=0;PQR=0;PRO=0;QA=1006;QR=7934;RO=197;RPL=0;RPP=57.2971;RPPR=430.79;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=197;SRP=430.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:16,8:16:640:8:319:-21.8522,0,-50.7084 0/1:73:56,17:56:2239:17:687:-40.1842,0,-179.698 0/0:17:17,0:17:690:0:0:0,-5.11751,-62.4287 0/0:19:19,0:19:770:0:0:0,-5.71957,-69.6203 0/0:42:42,0:42:1692:0:0:0,-12.6433,-152.503 0/0:47:47,0:47:1903:0:0:0,-14.1484,-171.465 dDocent_Contig_1843 1 . N G 117.425 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=34;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=136;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.04619,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:102:-8.39372,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1846 21 . A G 1470.9 . AB=0.210682;ABP=248.026;AC=4;AF=0.333333;AN=12;AO=94;CIGAR=1X;DP=695;DPB=695;DPRA=0;EPP=207.129;EPPR=1308.07;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3740;QR=23994;RO=601;RPL=0;RPP=207.129;RPPR=1308.07;RPR=94;RUN=1;SAF=94;SAP=207.129;SAR=0;SRF=601;SRP=1308.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:71:53,18:53:2123:18:717:-43.4811,0,-169.871 0/1:113:103,10:103:4113:10:400:-2.3395,0,-336.124 0/1:50:43,7:43:1738:7:280:-10.5192,0,-141.586 0/1:103:67,36:67:2676:36:1430:-97.9402,0,-209.947 0/0:205:194,11:194:7752:11:434:0,-22.2976,-657.859 0/0:153:141,12:141:5592:12:479:0,-2.60012,-459.647 dDocent_Contig_1847 11 . T C 53109.4 . AB=0.130435;ABP=657.851;AC=1;AF=0.0833333;AN=12;AO=109;CIGAR=1X2M1X;DP=2072;DPB=2072;DPRA=0;EPP=239.701;EPPR=552.526;GTI=0;LEN=1;MEANALT=6.5;MQM=56.3211;MQMR=57.9923;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.00383142;PAO=0;PQA=0;PQR=0;PRO=0;QA=4343;QR=10098;RO=261;RPL=0;RPP=239.701;RPPR=569.765;RPR=109;RUN=1;SAF=109;SAP=239.701;SAR=0;SRF=259;SRP=552.526;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:192:62,0,15,108:62:2406:0,15,108:0,594,4254:-323.619,-342.283,-538.22,-294.592,-490.53,-486.014,0,-195.974,-148.28,-163.463 0|0:288:96,0,0,173:96:3715:0,0,173:0,0,6900:-502.592,-531.491,-835.76,-531.491,-835.76,-835.76,0,-304.433,-304.433,-252.355 0|0:245:45,0,0,193:45:1737:0,0,193:0,0,7639:-562.071,-575.617,-718.15,-575.617,-718.15,-718.15,0,-142.667,-142.667,-84.5682 0|0:237:44,0,0,184:44:1693:0,0,184:0,0,7268:-552.167,-565.412,-704.286,-565.412,-704.286,-704.286,0,-139.038,-139.038,-83.6485 1|0:552:8,72,0,461:8:315:72,0,461:2859,0,18316:-1654.79,-1424.77,-1428.98,-1657.2,-1450.65,-1683.09,-206.652,0,-232.539,-93.7646 0|0:558:6,37,0,501:6:232:37,0,501:1484,0,19893:-1724.92,-1604.65,-1612.57,-1726.73,-1623.71,-1745.78,-131.756,-28.6432,-150.816,0 dDocent_Contig_1848 12 . G T 40.3349 . AB=0.121951;ABP=104.805;AC=2;AF=0.166667;AN=12;AO=18;CIGAR=1X;DP=272;DPB=272;DPRA=3.68571;EPP=42.0968;EPPR=554.564;GTI=0;LEN=1;MEANALT=1;MQM=36.1111;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=706;QR=10077;RO=254;RPL=0;RPP=42.0968;RPPR=554.564;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=254;SRP=554.564;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:62:60,2:60:2396:2:80:0,-12.6586,-209.791 0/1:51:45,6:45:1787:6:240:-3.86784,0,-145.697 0/0:67:65,2:65:2560:2:72:0,-14.0306,-224.403 0/1:31:27,4:27:1069:4:158:-3.38348,0,-87.1679 0/0:47:43,4:43:1727:4:156:0,-1.60012,-143.097 0/0:14:14,0:14:538:0:0:0,-4.21442,-48.7531 dDocent_Contig_1849 54 . A G 184.001 . AB=0.129771;ABP=158.975;AC=3;AF=0.25;AN=12;AO=18;CIGAR=1X;DP=216;DPB=216;DPRA=1.3;EPP=42.0968;EPPR=432.962;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=729;QR=7755;RO=198;RPL=18;RPP=42.0968;RPPR=432.962;RPR=0;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=198;SRP=432.962;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:13:11,2:11:426:2:80:-3.67819,0,-34.7726 0/1:28:22,6:22:842:6:244:-13.91,0,-67.6547 0/1:90:81,9:81:3170:9:364:-6.03226,0,-258.297 0/0:25:24,1:24:947:1:41:0,-3.43118,-81.438 0/0:19:19,0:19:738:0:0:0,-5.71957,-66.7345 0/0:41:41,0:41:1632:0:0:0,-12.3422,-147.118 dDocent_Contig_1850 28 . T C 138.531 . AB=0.151515;ABP=72.629;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=204;DPB=204;DPRA=0.956522;EPP=24.725;EPPR=424.276;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.2;PAIREDR=0.572165;PAO=0;PQA=0;PQR=0;PRO=0;QA=402;QR=7690;RO=194;RPL=0;RPP=24.725;RPPR=424.276;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=194;SRP=424.276;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1634:0:0:0,-12.3422,-147.292 0/0:37:37,0:37:1461:0:0:0,-11.1381,-131.739 0/0:14:14,0:14:564:0:0:0,-4.21442,-51.1025 0/0:46:46,0:46:1819:0:0:0,-13.8474,-163.93 0/1:38:32,6:32:1243:6:239:-10.4454,0,-100.702 0/1:28:24,4:24:969:4:163:-6.62959,0,-79.0809 dDocent_Contig_1851 64 . T C 4932.42 . AB=0.430952;ABP=20.4028;AC=5;AF=0.416667;AN=12;AO=189;CIGAR=1X;DP=520;DPB=520;DPRA=0;EPP=413.419;EPPR=721.768;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996979;PAO=0;PQA=0;PQR=0;PRO=0;QA=7284;QR=12825;RO=331;RPL=189;RPP=413.419;RPPR=721.768;RPR=0;RUN=1;SAF=189;SAP=413.419;SAR=0;SRF=331;SRP=721.768;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:78:69,9:69:2706:9:351:-8.4702,0,-220.204 0/1:74:40,34:40:1535:34:1315:-96.3448,0,-116.124 0/0:100:92,8:92:3577:8:311:0,-1.75207,-293.65 0/1:75:64,11:64:2461:11:435:-16.927,0,-199.094 0/1:74:49,25:49:1909:25:984:-66.5871,0,-149.751 0/1:119:17,102:17:637:102:3888:-314.135,0,-21.8334 dDocent_Contig_1852 27 . C T 32.5754 . AB=0.0934579;ABP=156.617;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=396;DPB=396;DPRA=1.23729;EPP=33.4109;EPPR=832.513;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=570;QR=15364;RO=382;RPL=0;RPP=33.4109;RPPR=832.513;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=382;SRP=832.513;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:54,0:54:2176:0:0:0,-16.2556,-196.008 0/0:67:67,0:67:2658:0:0:0,-20.169,-239.344 0/0:49:48,1:48:1949:1:41:0,-10.6559,-171.503 0/0:56:56,0:56:2272:0:0:0,-16.8577,-204.627 0/0:63:60,3:60:2416:3:122:0,-7.5924,-206.212 0/1:107:97,10:97:3893:10:407:-4.78018,0,-318.149 dDocent_Contig_1853 209 . N G 114.653 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:123:-11.4648,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1854 1 . N G 144.238 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=149;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:115:-10.7224,-0.90309,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1855 30 . G A 7667.35 . AB=0.427518;ABP=21.5825;AC=6;AF=0.5;AN=12;AO=174;CIGAR=1X1M1X;DP=407;DPB=411.333;DPRA=0;EPP=380.846;EPPR=196.271;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6895;QR=3371;RO=89;RPL=0;RPP=380.846;RPPR=196.271;RPR=174;RUN=1;SAF=174;SAP=380.846;SAR=0;SRF=89;SRP=196.271;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:70:9,1,41,0,19:9:349:1,41,0,19:38,1608,0,740:-161.669,-161.262,-189.634,-32.1468,-57.7036,-48.4775,-164.379,-189.935,-60.8198,-193.052,-103.561,-129.118,0,-132.234,-126.514 1|0:93:24,0,37,0,32:24:918:0,37,0,32:0,1464,0,1235:-139.352,-146.577,-221.897,-26.0921,-101.413,-90.275,-146.577,-221.897,-101.413,-221.897,-45.17,-120.487,0,-120.487,-110.854 1|0:65:12,0,35,0,18:12:456:0,35,0,18:0,1398,0,707:-132.299,-135.911,-173.304,-20.7635,-58.154,-47.618,-135.911,-173.304,-58.154,-173.304,-77.7673,-115.158,0,-115.158,-109.739 0|1:76:38,0,30,0,8:38:1443:0,30,0,8:0,1206,0,295:-87.9721,-99.4113,-217.729,0,-118.335,-109.304,-99.4113,-217.729,-118.335,-217.729,-75.3035,-193.617,-94.2219,-193.617,-191.209 1|0:58:3,7,13,1,34:3:98:7,13,1,34:278,519,38,1341:-144.281,-122.297,-128.097,-102.438,-87.4559,-106.431,-142.068,-127.087,-107.228,-149.674,-34.8557,-19.8673,0,-39.6414,-32.5225 1|0:45:3,0,18,4,20:3:107:0,18,4,20:0,700,153,784:-112.384,-113.287,-122.007,-55.7677,-64.4866,-59.068,-100.734,-109.454,-51.9341,-108.25,-48.8132,-57.5321,0,-44.9792,-51.5115 dDocent_Contig_1856 92 . T C 18841.9 . AB=0.0697279;ABP=948.546;AC=0;AF=0;AN=12;AO=41;CIGAR=2X1M;DP=932;DPB=932;DPRA=2.56209;EPP=92.0407;EPPR=393.875;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1414;QR=5907;RO=180;RPL=41;RPP=92.0407;RPPR=393.875;RPR=0;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=180;SRP=393.875;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:211:55,0,22,133:55:1825:0,22,133:0,757,4548:-352.579,-369.136,-516.775,-307.652,-455.291,-448.668,0,-147.633,-86.1464,-107.596 0|0:233:42,7,16,168:42:1384:7,16,168:243,556,5648:-444.917,-437.805,-547.576,-412.354,-504.477,-519.416,0,-92.1116,-66.659,-61.2946 0|0:144:54,0,3,86:54:1720:0,3,86:0,101,2919:-220.513,-236.768,-375.259,-228.585,-367.074,-366.171,0,-138.514,-130.329,-112.626 0|0:191:29,13,0,149:29:978:13,0,149:448,0,5091:-404.441,-376.778,-452.126,-413.171,-456.039,-492.432,0,-42.8623,-79.2568,-34.4034 0|0:100:0,0,0,100:0:0:0,0,100:0,0,3397:-305.961,-305.961,-305.961,-305.961,-305.961,-305.961,-30.103,-30.103,-30.103,0 0|0:53:0,0,0,53:0:0:0,0,53:0,0,1808:-163.003,-163.003,-163.003,-163.003,-163.003,-163.003,-15.9546,-15.9546,-15.9546,0 dDocent_Contig_1857 16 . G A 68.9516 . AB=0.147059;ABP=39.7976;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=247;DPB=247;DPRA=0.79096;EPP=16.0391;EPPR=524.164;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=0.958333;PAO=0;PQA=0;PQR=0;PRO=0;QA=244;QR=9508;RO=240;RPL=0;RPP=16.0391;RPPR=524.164;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=240;SRP=524.164;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:823:0:0:0,-6.32163,-74.3844 0/0:64:63,0:63:2485:0:0:0,-18.9649,-223.387 0/0:41:41,0:41:1635:0:0:0,-12.3422,-147.38 0/0:36:35,1:35:1391:1:41:0,-6.74251,-121.354 0/0:51:51,0:51:2022:0:0:0,-15.3525,-182.165 0/1:34:29,5:29:1152:5:203:-8.41804,0,-93.7313 dDocent_Contig_1858 7 . T C 98.2448 . AB=0.111111;ABP=192.17;AC=1;AF=0.0833333;AN=12;AO=23;CIGAR=1X;DP=702;DPB=702;DPRA=1.63731;EPP=52.9542;EPPR=1477.44;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.989691;PAO=0;PQA=0;PQR=0;PRO=0;QA=873;QR=25911;RO=679;RPL=0;RPP=52.9542;RPPR=1477.44;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=679;SRP=1477.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:111:111,0:111:4218:0:0:0,-33.4143,-379.7 0/0:116:116,0:116:4445:0:0:0,-34.9195,-400.112 0/0:76:76,0:76:2916:0:0:0,-22.8783,-262.614 0/0:83:83,0:83:3176:0:0:0,-24.9855,-285.996 0/0:172:165,7:165:6256:7:269:0,-27.2025,-538.405 0/1:144:128,16:128:4900:16:604:-11.3474,0,-397.686 dDocent_Contig_1859 47 . C T 20058.9 . AB=0.150847;ABP=627.747;AC=0;AF=0;AN=12;AO=89;CIGAR=1M3D20M1X2M1X2M1X4M;DP=1509;DPB=1186.26;DPRA=0;EPP=196.271;EPPR=237.529;GTI=0;LEN=1;MEANALT=13;MQM=60;MQMR=60;NS=6;NUMALT=9;ODDS=4.44089e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3397;QR=4208;RO=108;RPL=0;RPP=196.271;RPPR=237.529;RPR=89;RUN=1;SAF=89;SAP=196.271;SAR=0;SRF=108;SRP=237.529;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:258:25,0,34,40,19,17,61,44,0,9:25:957:0,34,40,19,17,61,44,0,9:0,1282,1442,708,668,2349,1607,0,358:-238.04,-245.566,-324.095,-140.523,-219.052,-208.817,-127.926,-206.455,-101.412,-194.413,-187.617,-266.147,-161.103,-148.506,-260.427,-190.624,-269.153,-164.11,-151.513,-211.205,-264.036,-52.7277,-131.258,-26.2134,-13.6172,-73.3087,-76.315,-112.895,-114.309,-192.838,-87.7947,-75.1983,-134.889,-137.896,0,-179.593,-245.566,-324.095,-219.052,-206.455,-266.147,-269.153,-131.258,-192.838,-324.095,-216.09,-294.62,-189.576,-176.979,-236.671,-239.678,-101.782,-163.362,-294.62,-291.91 0|0:286:41,0,27,30,14,1,109,18,2,33:41:1619:0,27,30,14,1,109,18,2,33:0,893,1125,519,40,4175,641,80,1268:-330.254,-342.597,-475.823,-270.42,-403.645,-395.518,-250.461,-383.687,-311.51,-374.656,-300.142,-433.368,-361.191,-341.233,-429.154,-339.301,-472.528,-400.35,-380.392,-430.073,-472.227,0,-133.231,-61.0556,-41.0939,-90.776,-129.936,-100.419,-290.371,-423.597,-351.42,-331.462,-381.143,-420.302,-81.0055,-418.179,-336.006,-469.232,-397.055,-377.097,-426.778,-465.937,-126.64,-417.007,-468.63,-238.517,-371.744,-299.567,-279.608,-329.289,-368.449,-29.1496,-319.518,-365.154,-361.81 0|0:151:27,0,14,14,11,6,30,23,11,13:27:1060:0,14,14,11,6,30,23,11,13:0,543,525,381,236,1138,883,404,498:-85.1686,-93.2964,-180.479,-48.6845,-135.868,-131.654,-50.302,-137.485,-92.8737,-133.271,-62.3425,-149.525,-104.914,-106.531,-146.214,-73.8829,-161.066,-116.455,-118.072,-130.112,-159.26,0,-87.1838,-42.5722,-44.1898,-56.2303,-67.7705,-78.1529,-20.8229,-108.007,-63.3951,-65.0125,-77.0529,-88.5934,-14.711,-101.083,-60.2783,-147.461,-102.85,-104.467,-116.507,-128.048,-54.166,-74.9887,-144.15,-52.4324,-139.616,-95.0042,-96.6215,-108.662,-120.202,-46.3201,-67.1429,-106.598,-135.702 0|0:224:10,0,40,27,18,0,56,19,8,33:10:389:0,40,27,18,0,56,19,8,33:0,1457,1027,671,0,2078,724,268,1241:-254.004,-257.015,-288.982,-138.04,-170.007,-157.966,-172.791,-204.758,-85.7834,-196.63,-202.094,-234.061,-115.086,-149.837,-228.642,-257.015,-288.982,-170.007,-204.758,-234.061,-288.982,-87.0067,-118.974,0,-34.7497,-64.0529,-118.974,-102.116,-197.633,-229.6,-110.626,-145.376,-174.679,-229.6,-59.5923,-223.881,-235.32,-267.287,-148.313,-183.064,-212.366,-267.287,-97.2799,-207.906,-264.879,-155.356,-187.323,-68.349,-103.099,-132.402,-187.323,-17.3153,-127.942,-165.629,-177.389 0|0:264:0,50,3,94,2,0,19,89,0,0:0:0:50,3,94,2,0,19,89,0,0:1879,114,3507,80,0,711,3318,0,0:-558.638,-404.733,-389.682,-549.289,-395.384,-548.386,-271.57,-117.665,-262.221,-243.273,-552.048,-398.143,-542.699,-264.979,-551.446,-558.638,-404.733,-549.289,-271.57,-552.048,-558.638,-500.421,-346.517,-491.072,-213.353,-493.831,-500.421,-494.702,-287.068,-133.162,-277.718,0,-280.477,-287.068,-228.851,-260.276,-558.638,-404.733,-549.289,-271.57,-552.048,-558.638,-500.421,-287.068,-558.638,-558.638,-404.733,-549.289,-271.57,-552.048,-558.638,-500.421,-287.068,-558.638,-558.638 0|0:326:5,39,59,127,6,0,18,49,0,2:5:183:39,59,127,6,0,18,49,0,2:1518,2180,4753,225,0,688,1831,0,77:-551.006,-427.758,-430.971,-374.229,-264.429,-371.422,-163.328,-53.5264,0,-140.051,-534.084,-424.284,-370.755,-159.854,-547.231,-552.511,-442.711,-389.183,-178.282,-549.037,-567.465,-496.068,-386.268,-332.739,-121.838,-492.594,-511.022,-505.603,-402.631,-292.83,-239.302,-28.4007,-399.157,-417.584,-361.141,-402.834,-552.511,-442.711,-389.183,-178.282,-549.037,-567.465,-511.022,-417.584,-567.465,-546.19,-436.39,-382.861,-171.96,-542.716,-561.143,-504.7,-411.262,-561.143,-560.541 dDocent_Contig_1860 71 . T C 63.8841 . AB=0.136364;ABP=78.8144;AC=1;AF=0.0833333;AN=12;AO=23;CIGAR=1X;DP=434;DPB=434;DPRA=0;EPP=52.9542;EPPR=895.485;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.944039;PAO=0;PQA=0;PQR=0;PRO=0;QA=763;QR=14093;RO=411;RPL=23;RPP=52.9542;RPPR=895.485;RPR=0;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=411;SRP=895.485;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:46,2:46:1603:2:72:0,-7.61272,-137.724 0/0:91:89,2:89:3068:2:62:0,-21.5055,-270.467 0/0:78:71,7:71:2459:7:226:0,-2.82474,-200.913 0/0:73:72,1:72:2456:1:33:0,-18.6761,-217.996 0/1:66:57,9:57:1956:9:305:-7.91129,0,-156.446 0/0:78:76,2:76:2551:2:65:0,-17.3069,-223.666 dDocent_Contig_1861 10 . T C 95576.4 . AB=0.614516;ABP=567.985;AC=6;AF=0.5;AN=12;AO=3048;CIGAR=1X3M1X;DP=4960;DPB=4960;DPRA=0;EPP=6621.66;EPPR=2660.89;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.995079;PAIREDR=0.999183;PAO=0;PQA=0;PQR=0;PRO=0;QA=119961;QR=48490;RO=1224;RPL=0;RPP=6621.66;RPPR=2660.89;RPR=3048;RUN=1;SAF=3048;SAP=6621.66;SAR=0;SRF=1224;SRP=2660.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:741:171,0,465,103:171:6718:0,465,103:0,18242,4059:-1448.68,-1500.16,-2052.67,0,-552.516,-412.537,-1166.23,-1718.75,-218.595,-1687.74 1|0:844:92,3,636,111:92:3666:3,636,111:110,25044,4376:-2090.63,-2109.33,-2410.31,-58.1244,-351.018,-168.553,-1758.31,-2051.21,0,-2026.78 1|0:546:80,0,384,82:80:3149:0,384,82:0,15146,3281:-1233.3,-1257.38,-1516.41,-11.2508,-270.277,-154.682,-987.108,-1246.14,0,-1221.45 0|1:864:147,0,610,103:147:5831:0,610,103:0,24047,4054:-1934.14,-1978.39,-2458.37,0,-479.98,-296.352,-1644.92,-2124.9,-146.513,-2093.9 0|1:966:448,48,455,9:448:17772:48,455,9:1850,17891,357:-1336.74,-1319.7,-2768.15,0,-1311.01,-1325.94,-1442.22,-2753.22,-1433.52,-2902.41 0|1:999:286,196,498,16:286:11354:196,498,16:7708,19591,635:-1525.37,-977.448,-1853.1,0,-300.639,-784.741,-1559.19,-1859.83,-882.38,-2489.03 dDocent_Contig_1862 15 . T C 297.828 . AB=0.222973;ABP=101.666;AC=4;AF=0.333333;AN=12;AO=42;CIGAR=1X;DP=293;DPB=293;DPRA=0;EPP=94.2121;EPPR=548.05;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1686;QR=9784;RO=251;RPL=0;RPP=94.2121;RPPR=548.05;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=251;SRP=548.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:21,4:21:829:4:161:-7.34915,0,-67.4003 0/0:45:43,2:43:1669:2:82:0,-5.76667,-142.67 0/1:10:8,2:8:318:2:82:-4.76938,0,-25.9756 0/1:32:29,3:29:1126:3:121:-1.64703,0,-91.9886 0/1:81:57,24:57:2233:24:970:-22.855,0,-176.761 0/0:100:93,7:93:3609:7:270:0,-8.63936,-303.412 dDocent_Contig_1863 20 . T C 247.632 . AB=0.23913;ABP=30.2009;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=254;DPB=254;DPRA=1.24779;EPP=37.7539;EPPR=519.821;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.8125;PAIREDR=0.94958;PAO=0;PQA=0;PQR=0;PRO=0;QA=635;QR=9578;RO=238;RPL=0;RPP=37.7539;RPPR=519.821;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=238;SRP=519.821;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:21,1:21:832:1:41:0,-2.52809,-71.101 0/1:46:35,11:35:1400:11:442:-26.2861,0,-112.405 0/0:25:25,0:25:1011:0:0:0,-7.52575,-91.2829 0/0:28:28,0:28:1122:0:0:0,-8.42884,-101.262 0/0:60:60,0:60:2434:0:0:0,-18.0618,-219.196 0/0:73:69,4:69:2779:4:152:0,-7.9284,-236.159 dDocent_Contig_1864 170 . G A 5897.74 . AB=0.661111;ABP=43.5927;AC=8;AF=0.666667;AN=12;AO=184;CIGAR=1X;DP=245;DPB=245;DPRA=0;EPP=402.561;EPPR=135.47;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7217;QR=2441;RO=61;RPL=184;RPP=402.561;RPPR=135.47;RPR=0;RUN=1;SAF=0;SAP=402.561;SAR=184;SRF=0;SRP=135.47;SRR=61;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:7,31:7:285:31:1224:-98.9988,0,-14.5853 1/1:38:0,38:0:0:38:1496:-134.875,-11.4391,0 0/1:43:24,19:24:968:19:749:-54.7894,0,-74.4739 0/1:54:23,31:23:908:31:1197:-91.7481,0,-65.7695 1/1:27:0,27:0:0:27:1059:-95.6015,-8.12781,0 0/1:45:7,38:7:280:38:1492:-120.983,0,-12.0254 dDocent_Contig_1865 113 . G A 74.8308 . AB=0.333333;ABP=6.62942;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X5M1X;DP=180;DPB=180;DPRA=1.71134;EPP=20.3821;EPPR=367.818;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=250;QR=5658;RO=168;RPL=0;RPP=20.3821;RPPR=367.818;RPR=8;RUN=1;SAF=0;SAP=20.3821;SAR=8;SRF=0;SRP=367.818;SRR=168;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:5:5,0,0:5:173:0,0:0,0:0,-1.50515,-15.9102,-1.50515,-15.9102,-15.9102 0|0:26:26,0,0:26:881:0,0:0,0:0,-7.82678,-79.6023,-7.82678,-79.6023,-79.6023 0|0:68:64,0,3:64:2131:0,3:0,103:0,-19.2659,-191.715,-10.9072,-183.351,-182.448 0|0:30:30,0,0:30:1012:0,0:0,0:0,-9.0309,-91.3869,-9.0309,-91.3869,-91.3869 0|0:36:33,2,0:33:1129:2,0:70,0:0,-4.23187,-95.2727,-9.93399,-95.8748,-101.571 0|1:15:10,0,5:10:332:0,5:0,147:-9.00592,-12.0162,-38.902,0,-27.1924,-25.6872 dDocent_Contig_1866 98 . N A 434.303 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=15;CIGAR=1X;DP=15;DPB=15;DPRA=0;EPP=35.5824;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=463;QR=0;RO=0;RPL=15;RPP=35.5824;RPPR=0;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:6:0,6:0:0:6:195:-17.8696,-1.80618,0 1/1:4:0,4:0:0:4:119:-11.0054,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:126:-11.6521,-1.20412,0 1/1:1:0,1:0:0:1:23:-2.29991,-0.30103,0 dDocent_Contig_1867 46 . C A 894.071 . AB=0.169329;ABP=300.28;AC=1;AF=0.0833333;AN=12;AO=83;CIGAR=1X;DP=1771;DPB=1771;DPRA=1.64927;EPP=183.243;EPPR=3267.26;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.938316;PAO=0;PQA=0;PQR=0;PRO=0;QA=3234;QR=66866;RO=1686;RPL=0;RPP=183.243;RPPR=3655.43;RPR=83;RUN=1;SAF=83;SAP=183.243;SAR=0;SRF=1640;SRP=3275.46;SRR=46;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:365:348,16:348:13800:16:621:0,-53.7315,-1184.81 0/0:427:422,4:422:16634:4:158:0,-114.037,-1481.21 0/0:254:244,10:244:9711:10:400:0,-40.1019,-837.044 0/1:313:260,53:260:10368:53:2055:-90.93,0,-838.256 0/0:177:177,0:177:6974:0:0:0,-53.2823,-627.37 0/0:235:235,0:235:9379:0:0:0,-70.742,-843.549 dDocent_Contig_1868 126 . C T 434.997 . AB=0.232759;ABP=74.9684;AC=2;AF=0.166667;AN=12;AO=30;CIGAR=1X;DP=301;DPB=301;DPRA=1.50833;EPP=68.1545;EPPR=591.479;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.966667;PAIREDR=0.837638;PAO=0;PQA=0;PQR=0;PRO=0;QA=996;QR=8973;RO=271;RPL=0;RPP=68.1545;RPPR=591.479;RPR=30;RUN=1;SAF=0;SAP=68.1545;SAR=30;SRF=0;SRP=591.479;SRR=271;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:40,0:40:1317:0:0:0,-12.0412,-118.82 0/0:65:62,3:62:2061:3:96:0,-10.6097,-176.804 0/0:30:30,0:30:1017:0:0:0,-9.0309,-91.8354 0/0:50:50,0:50:1677:0:0:0,-15.0515,-151.215 0/1:59:43,16:43:1393:16:530:-30.2546,0,-107.895 0/1:57:46,11:46:1508:11:370:-16.467,0,-118.843 dDocent_Contig_1869 13 . C A 818.397 . AB=0.214689;ABP=128.158;AC=2;AF=0.166667;AN=12;AO=41;CIGAR=1X;DP=835;DPB=835;DPRA=1.07547;EPP=92.0407;EPPR=1727.16;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.982368;PAO=0;PQA=0;PQR=0;PRO=0;QA=1620;QR=31785;RO=794;RPL=0;RPP=92.0407;RPPR=1727.16;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=794;SRP=1727.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:116:116,0:116:4681:0:0:0,-34.9195,-421.186 0/0:153:151,2:151:6060:2:80:0,-38.4658,-537.569 0/0:240:239,1:239:9573:1:10:0,-71.2472,-859.951 0/0:149:149,0:149:5977:0:0:0,-44.8535,-537.692 0/1:124:97,27:97:3807:27:1085:-60.6101,0,-305.302 0/1:53:42,11:42:1687:11:445:-24.4515,0,-136.097 dDocent_Contig_1870 98 . N A 221.965 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=225;QR=0;RO=0;RPL=7;RPP=18.2106;RPPR=0;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:120:-11.0968,-1.20412,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_1871 25 . T G 61.6397 . AB=0.147059;ABP=39.7976;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=328;DPB=328;DPRA=0.578231;EPP=13.8677;EPPR=704.396;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=195;QR=12688;RO=323;RPL=0;RPP=13.8677;RPPR=704.396;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=323;SRP=704.396;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:55:55,0:55:2189:0:0:0,-16.5566,-197.194 0/0:71:71,0:71:2776:0:0:0,-21.3731,-249.964 0/0:45:45,0:45:1792:0:0:0,-13.5463,-161.501 0/0:79:79,0:79:3043:0:0:0,-23.7814,-273.983 0/0:44:44,0:44:1760:0:0:0,-13.2453,-158.615 0/1:34:29,5:29:1128:5:195:-7.68685,0,-91.5657 dDocent_Contig_1872 39 . A T 2784.82 . AB=0.264501;ABP=210.63;AC=2;AF=0.166667;AN=12;AO=178;CIGAR=1X;DP=1849;DPB=1849;DPRA=0;EPP=389.532;EPPR=3631.54;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.11236;PAIREDR=0.0448833;PAO=0;PQA=0;PQR=0;PRO=0;QA=7096;QR=65899;RO=1671;RPL=0;RPP=389.532;RPPR=3631.54;RPR=178;RUN=1;SAF=178;SAP=389.532;SAR=0;SRF=1671;SRP=3631.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:262:249,13:249:9809:13:524:0,-31.363,-834.73 0/0:392:374,18:374:14703:18:713:0,-53.5093,-1257.7 0/0:287:265,22:265:10492:22:864:0,-8.32789,-865.555 0/0:477:466,11:466:18425:11:427:0,-104.809,-1618.02 0/1:226:168,58:168:6572:58:2336:-142.362,0,-523.2 0/1:205:149,56:149:5898:56:2232:-139.342,0,-468.919 dDocent_Contig_1873 8 . C T 3013.08 . AB=0.231511;ABP=392.465;AC=4;AF=0.333333;AN=12;AO=157;CIGAR=1X;DP=867;DPB=867;DPRA=0;EPP=343.931;EPPR=1544.76;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.980892;PAIREDR=0.957746;PAO=0;PQA=0;PQR=0;PRO=0;QA=5997;QR=27058;RO=710;RPL=0;RPP=343.931;RPPR=1544.76;RPR=157;RUN=1;SAF=157;SAP=343.931;SAR=0;SRF=710;SRP=1544.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:161:151,10:151:5764:10:384:0,-13.5496,-483.811 0/1:176:159,17:159:6012:17:640:-4.95273,0,-488.047 0/0:84:81,3:81:3088:3:117:0,-14.3761,-267.17 0/1:160:125,35:125:4794:35:1334:-72.1809,0,-383.327 0/1:171:118,53:118:4499:53:2022:-130.741,0,-353.497 0/1:115:76,39:76:2901:39:1500:-100.656,0,-226.645 dDocent_Contig_1874 13 . G A 424.098 . AB=0.116667;ABP=385.913;AC=4;AF=0.333333;AN=12;AO=39;CIGAR=3M1X;DP=427;DPB=430.25;DPRA=1.69778;EPP=87.6977;EPPR=812.97;GTI=0;LEN=1;MEANALT=1.8;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.683646;PAO=0;PQA=0;PQR=0;PRO=0;QA=1563;QR=14870;RO=373;RPL=0;RPP=87.6977;RPPR=812.97;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=373;SRP=812.97;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:82:64,10,7:64:2538:10,7:390,284:-12.7787,0,-205.894,-8.61771,-185.481,-215.427 0|0:82:78,0,4:78:3123:0,4:0,158:0,-23.4803,-280.757,-10.0846,-267.756,-266.552 0|0:45:44,1,0:44:1772:1,0:41,0:0,-9.45178,-155.601,-13.2453,-155.902,-159.286 0|1:56:43,2,10:43:1699:2,10:82,394:-19.4578,-25.6316,-164.834,0,-133.024,-136.783 0|1:75:68,0,7:68:2716:0,7:0,284:-3.35617,-23.8262,-247.519,0,-224.098,-221.99 0|1:87:76,0,11:76:3022:0,11:0,443:-14.0357,-36.914,-285.716,0,-249.204,-245.893 dDocent_Contig_1875 43 . T C 255.565 . AB=0.106667;ABP=506.937;AC=2;AF=0.166667;AN=12;AO=46;CIGAR=1X;DP=1696;DPB=1696;DPRA=0.661117;EPP=102.898;EPPR=3585.94;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.995758;PAO=0;PQA=0;PQR=0;PRO=0;QA=1810;QR=64912;RO=1650;RPL=0;RPP=102.898;RPPR=3585.94;RPR=46;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=1650;SRP=3585.94;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:267:267,0:267:10492:0:0:0,-80.375,-943.659 0/1:224:199,25:199:7917:25:972:-20.3452,0,-644.705 0/1:151:136,15:136:5292:15:595:-8.4332,0,-430.713 0/0:300:294,6:294:11532:6:243:0,-68.061,-1014.92 0/0:348:348,0:348:13753:0:0:0,-104.758,-1236.82 0/0:406:406,0:406:15926:0:0:0,-122.218,-1432.18 dDocent_Contig_1876 12 . T G 24757.7 . AB=0.0265625;ABP=2495.02;AC=0;AF=0;AN=12;AO=34;CIGAR=1X1M1X;DP=1486;DPB=1486;DPRA=0;EPP=76.8404;EPPR=1353.67;GTI=0;LEN=1;MEANALT=2.8;MQM=60;MQMR=59.9277;NS=6;NUMALT=2;ODDS=0;PAIRED=0.764706;PAIREDR=0.942122;PAO=0;PQA=0;PQR=0;PRO=0;QA=1359;QR=24819;RO=622;RPL=0;RPP=76.8404;RPPR=1353.67;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=622;SRP=1353.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:206:59,0,144:59:2360:0,144:0,5731:-454.133,-471.894,-666.291,0,-194.447,-151.099 0|0:251:104,5,133:104:4165:5,133:202,5262:-401.695,-416.349,-757.785,0,-326.28,-302.897 0|0:242:111,2,126:111:4440:2,126:81,5057:-383.251,-409.986,-775.093,0,-359.024,-327.774 0|0:270:104,2,161:104:4149:2,161:82,6461:-501.027,-525.566,-866.638,0,-334.898,-293.201 0|0:240:107,18,115:107:4231:18,115:711,4660:-352.066,-325.775,-668.515,0,-289.661,-313.545 0|0:277:137,7,133:137:5474:7,133:283,5296:-394.814,-412.723,-861.48,0,-427.528,-410.823 dDocent_Contig_1877 61 . A C 149.361 . AB=0.163934;ABP=62.8504;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=339;DPB=339;DPRA=0.801653;EPP=26.8965;EPPR=715.253;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.909091;PAIREDR=0.789634;PAO=0;PQA=0;PQR=0;PRO=0;QA=423;QR=12496;RO=328;RPL=6;RPP=3.20771;RPPR=3.67233;RPR=5;RUN=1;SAF=6;SAP=3.20771;SAR=5;SRF=169;SRP=3.67233;SRR=159;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:69:69,0:69:2632:0:0:0,-20.7711,-237.053 0/0:61:61,0:61:2339:0:0:0,-18.3628,-210.703 0/0:55:55,0:55:2090:0:0:0,-16.5566,-188.317 0/0:57:57,0:57:2187:0:0:0,-17.1587,-197.042 0/0:36:35,1:35:1303:1:40:0,-6.8414,-113.557 0/1:61:51,10:51:1945:10:383:-16.4589,0,-156.922 dDocent_Contig_1878 14 . T G 436.25 . AB=0.256757;ABP=41.0404;AC=2;AF=0.166667;AN=12;AO=19;CIGAR=1X;DP=529;DPB=529;DPRA=0.325275;EPP=44.2683;EPPR=1110.46;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=760;QR=20367;RO=510;RPL=0;RPP=44.2683;RPPR=1110.46;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=510;SRP=1110.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:95:95,0:95:3771:0:0:0,-28.5978,-339.398 0/0:86:86,0:86:3444:0:0:0,-25.8886,-309.99 0/0:93:93,0:93:3746:0:0:0,-27.9958,-337.141 0/0:181:181,0:181:7235:0:0:0,-54.4864,-650.78 0/1:50:38,12:38:1508:12:476:-28.1382,0,-120.9 0/1:24:17,7:17:663:7:284:-18.7087,0,-52.7678 dDocent_Contig_1880 74 . T C 64.6549 . AB=0.125;ABP=71.4117;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=478;DPB=478;DPRA=1.01577;EPP=20.3821;EPPR=1023.6;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=312;QR=18343;RO=470;RPL=8;RPP=20.3821;RPPR=1023.6;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=470;SRP=1023.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:61:61,0:61:2379:0:0:0,-18.3628,-214.276 0/0:65:65,0:65:2512:0:0:0,-19.5669,-226.249 0/0:105:104,1:104:4087:1:40:0,-27.6125,-363.845 0/1:56:49,7:49:1926:7:272:-7.98836,0,-156.693 0/0:114:114,0:114:4437:0:0:0,-34.3174,-399.326 0/0:77:77,0:77:3002:0:0:0,-23.1793,-270.305 dDocent_Contig_1881 59 . T C 868.086 . AB=0.24359;ABP=92.0963;AC=2;AF=0.166667;AN=12;AO=38;CIGAR=2X;DP=393;DPB=393;DPRA=1.31646;EPP=85.5263;EPPR=771.712;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.951977;PAO=0;PQA=0;PQR=0;PRO=0;QA=1515;QR=13933;RO=354;RPL=38;RPP=85.5263;RPPR=771.712;RPR=0;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=354;SRP=771.712;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:38:38,0:38:1441:0:0:0,-11.4391,-129.941 0|0:92:92,0:92:3645:0:0:0,-27.6948,-328.099 0|0:27:26,0:26:1041:0:0:0,-7.82678,-93.8928 0|0:80:80,0:80:3109:0:0:0,-24.0824,-279.918 0|1:58:46,12:46:1831:12:477:-25.82,0,-147.546 0|1:98:72,26:72:2866:26:1038:-64.2105,0,-228.551 dDocent_Contig_1882 60 . G A 2711.35 . AB=0.2723;ABP=194.854;AC=3;AF=0.25;AN=12;AO=165;CIGAR=1X;DP=1344;DPB=1344;DPRA=0;EPP=264.653;EPPR=2563.18;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.818182;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6361;QR=45826;RO=1179;RPL=165;RPP=361.303;RPPR=2563.18;RPR=0;RUN=1;SAF=153;SAP=264.653;SAR=12;SRF=1179;SRP=2563.18;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:135:116,19:116:4487:19:729:-25.288,0,-363.158 0/1:184:118,66:118:4589:66:2544:-173.739,0,-357.575 0/1:107:76,31:76:2893:31:1214:-77.3302,0,-228.287 0/0:259:241,18:241:9402:18:668:0,-17.5335,-785.235 0/0:369:347,22:347:13397:22:856:0,-33.7236,-1127.51 0/0:290:281,9:281:11058:9:350:0,-55.4394,-962.688 dDocent_Contig_1883 16 . T C 168566 . AB=0.763243;ABP=1116.54;AC=10;AF=0.833333;AN=12;AO=4891;CIGAR=1X;DP=5387;DPB=5387;DPRA=0;EPP=10623.7;EPPR=1077.89;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.9515;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999591;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=196088;QR=19771;RO=495;RPL=0;RPP=10623.7;RPPR=1077.89;RPR=4891;RUN=1;SAF=4891;SAP=10623.7;SAR=0;SRF=495;SRP=1077.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:808:12,796:12:472:796:31941:-2828.83,-200.405,0 1/1:1045:8,1037:8:322:1037:41530:-3703.04,-285.23,0 1/1:640:7,633:7:279:633:25361:-2254.42,-167.18,0 1/1:1044:31,1013:31:1246:1013:40619:-3538.97,-201.865,0 0/1:871:203,667:203:8062:667:26708:-2138.57,0,-462.861 0/1:979:234,745:234:9390:745:29929:-2396.04,0,-549.789 dDocent_Contig_1884 34 . G C 4580.92 . AB=0.356989;ABP=85.615;AC=2;AF=0.166667;AN=12;AO=167;CIGAR=1X;DP=939;DPB=939;DPRA=1.72965;EPP=365.646;EPPR=1677.22;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.997406;PAO=0;PQA=0;PQR=0;PRO=0;QA=6721;QR=30481;RO=771;RPL=0;RPP=365.646;RPPR=1677.22;RPR=167;RUN=1;SAF=167;SAP=365.646;SAR=0;SRF=771;SRP=1677.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:123:123,0:123:4892:0:0:0,-37.0267,-440.195 0/0:132:131,0:131:5161:0:0:0,-39.4349,-463.994 0/0:89:89,0:89:3545:0:0:0,-26.7917,-319.092 0/0:130:129,1:129:5080:1:41:0,-35.0393,-453.018 0/1:269:162,107:162:6426:107:4290:-305.076,0,-497.144 0/1:196:137,59:137:5377:59:2390:-156.238,0,-424.819 dDocent_Contig_1885 98 . N A 140.891 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=7;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=146;QR=0;RO=0;RPL=7;RPP=18.2106;RPPR=0;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:5:0,4:0:0:4:101:-9.23384,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:20:-1.99996,-0.30103,0 1/1:2:0,2:0:0:2:25:-2.37497,-0.60206,0 dDocent_Contig_1886 16 . C T 210.525 . AB=0.32;ABP=10.0459;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=151;DPB=151;DPRA=1.51163;EPP=22.5536;EPPR=311.359;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.929577;PAO=0;PQA=0;PQR=0;PRO=0;QA=368;QR=5653;RO=142;RPL=0;RPP=22.5536;RPPR=311.359;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=142;SRP=311.359;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:17,8:17:686:8:327:-22.2744,0,-54.5438 0/0:22:22,0:22:878:0:0:0,-6.62266,-79.3281 0/0:11:11,0:11:440:0:0:0,-3.31133,-39.952 0/0:40:39,1:39:1538:1:41:0,-7.94663,-134.566 0/0:27:27,0:27:1075:0:0:0,-8.12781,-97.0371 0/0:26:26,0:26:1036:0:0:0,-7.82678,-93.5261 dDocent_Contig_1887 58 . T C 9824.21 . AB=0.63189;ABP=79.7642;AC=6;AF=0.5;AN=12;AO=321;CIGAR=1X;DP=508;DPB=508;DPRA=0;EPP=700.053;EPPR=404.733;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.915888;PAIREDR=0.983784;PAO=0;PQA=0;PQR=0;PRO=0;QA=12725;QR=7400;RO=185;RPL=321;RPP=700.053;RPPR=404.733;RPR=0;RUN=1;SAF=321;SAP=700.053;SAR=0;SRF=185;SRP=404.733;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:70:27,43:27:1065:43:1683:-130.628,0,-75.0669 0/1:93:36,56:36:1435:56:2257:-175.511,0,-101.616 0/1:78:21,57:21:819:57:2230:-177.387,0,-50.5424 0/1:89:49,40:49:1982:40:1594:-116.906,0,-151.774 0/1:74:14,60:14:569:60:2360:-190.28,0,-29.276 0/1:104:38,65:38:1530:65:2601:-202.932,0,-106.651 dDocent_Contig_1888 33 . G A 1416.95 . AB=0.134639;ABP=950.296;AC=1;AF=0.0833333;AN=12;AO=177;CIGAR=1X;DP=3734;DPB=3734;DPRA=1.40316;EPP=387.361;EPPR=7700.9;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9185;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997189;PAO=0;PQA=0;PQR=0;PRO=0;QA=6925;QR=138456;RO=3557;RPL=0;RPP=387.361;RPPR=7726.94;RPR=177;RUN=1;SAF=177;SAP=387.361;SAR=0;SRF=3554;SRP=7700.9;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:528:517,11:517:20042:11:438:0,-119.168,-1762.57 0/0:584:582,2:582:22668:2:78:0,-168.398,-2031.01 0/0:433:433,0:433:16978:0:0:0,-130.346,-1526.81 0/0:548:548,0:548:21322:0:0:0,-164.964,-1917.45 0/1:817:707,110:707:27503:110:4324:-143.218,0,-2214.19 0/0:824:770,54:770:29943:54:2085:0,-60.2066,-2504.65 dDocent_Contig_1889 11 . T C 17334.4 . AB=0.6483;ABP=165.957;AC=6;AF=0.5;AN=12;AO=553;CIGAR=1X;DP=853;DPB=853;DPRA=0;EPP=1203.83;EPPR=654.452;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=22238;QR=12016;RO=300;RPL=0;RPP=1203.83;RPPR=654.452;RPR=553;RUN=1;SAF=553;SAP=1203.83;SAR=0;SRF=300;SRP=654.452;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:97:31,66:31:1250:66:2638:-208.34,0,-83.5688 0/1:146:50,96:50:2010:96:3864:-303.797,0,-137.139 0/1:221:62,159:62:2508:159:6376:-507.038,0,-159.322 0/1:136:61,75:61:2445:75:3022:-231.118,0,-179.247 0/1:125:66,59:66:2623:59:2375:-176.268,0,-198.572 0/1:128:30,98:30:1180:98:3963:-318.105,0,-67.9325 dDocent_Contig_1890 28 . G A 5266.75 . AB=0.055;ABP=347.015;AC=0;AF=0;AN=12;AO=11;CIGAR=2X3M;DP=393;DPB=393;DPRA=0;EPP=26.8965;EPPR=400.39;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.857923;PAO=0;PQA=0;PQR=0;PRO=0;QA=432;QR=7062;RO=183;RPL=0;RPP=26.8965;RPPR=400.39;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=183;SRP=400.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:80:34,5,0,40:34:1321:5,0,40:204,0,1546:-116.703,-110.104,-217.149,-126.938,-218.654,-235.486,0,-91.6996,-108.533,-96.4921 0|0:54:25,2,1,26:25:974:2,1,26:81,41,1022:-76.5034,-77.3492,-156.792,-80.6446,-154.01,-160.389,0,-73.3518,-76.6472,-72.2052 0|0:55:24,9,8,14:24:943:9,8,14:360,311,571:-39.8913,-17.4611,-92.3118,-21.5678,-69.4704,-96.7176,0,-47.9061,-52.0118,-73.3486 0|0:45:19,0,0,25:19:737:0,0,25:0,0,1008:-77.6579,-83.3775,-143.928,-83.3775,-143.928,-143.928,0,-60.8254,-60.8254,-53.2997 0|0:68:39,0,0,29:39:1499:0,0,29:0,0,1162:-84.388,-96.1282,-219.162,-96.1282,-219.162,-219.162,0,-123.427,-123.427,-114.697 0|0:91:42,0,2,47:42:1588:0,2,47:0,80,1886:-142.753,-155.397,-285.541,-148.807,-278.95,-278.348,0,-130.134,-123.543,-115.985 dDocent_Contig_1891 28 . T A 3516.63 . AB=0.138122;ABP=2061.83;AC=3;AF=0.25;AN=12;AO=303;CIGAR=1X;DP=4009;DPB=4009;DPRA=0;EPP=660.966;EPPR=8046.14;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=12147;QR=148231;RO=3704;RPL=0;RPP=660.966;RPPR=8046.14;RPR=303;RUN=1;SAF=303;SAP=660.966;SAR=0;SRF=3704;SRP=8046.14;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:571:492,79:492:19664:79:3186:-114.913,0,-1596.18 0/1:697:583,114:583:23356:114:4552:-199.792,0,-1890.14 0/1:542:483,57:483:19331:57:2276:-42.1797,0,-1575.32 0/0:666:635,31:635:25447:31:1244:0,-88.256,-2175.69 0/0:674:669,5:669:26673:5:203:0,-184.241,-2379.51 0/0:859:842,17:842:33760:17:686:0,-196.516,-2973.11 dDocent_Contig_1892 1 . N G 158.931 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=157;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 1/1:1:0,1:0:0:1:37:-3.69783,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:79:-7.49724,-0.60206,0 dDocent_Contig_1893 27 . T G 6211.62 . AB=0.153307;ABP=2686.11;AC=2;AF=0.166667;AN=12;AO=453;CIGAR=1X;DP=5709;DPB=5709;DPRA=0;EPP=986.687;EPPR=11401.1;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=17855;QR=209274;RO=5249;RPL=0;RPP=986.687;RPPR=11401.1;RPR=453;RUN=1;SAF=453;SAP=986.687;SAR=0;SRF=5249;SRP=11401.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:736:721,14:721:28796:14:555:0,-171.359,-2538.77 0/0:873:847,26:847:33763:26:1020:0,-170.706,-2943.5 0/0:589:584,3:584:23325:3:119:0,-166.011,-2086.11 0/0:941:924,16:924:36814:16:626:0,-226.688,-3253.22 0/1:1204:985,219:985:39280:219:8619:-412.816,0,-3169.09 0/1:1366:1188,175:1188:47296:175:6916:-211.568,0,-3841.64 dDocent_Contig_1894 21 . A G 53.5659 . AB=0.0878553;ABP=573.995;AC=1;AF=0.0833333;AN=12;AO=39;CIGAR=1X;DP=3185;DPB=3185;DPRA=1.63186;EPP=87.6977;EPPR=6827.95;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997773;PAO=0;PQA=0;PQR=0;PRO=0;QA=1572;QR=125072;RO=3143;RPL=0;RPP=87.6977;RPPR=6827.95;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=3143;SRP=6827.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:505:504,0:504:19897:0:0:0,-151.719,-1788.92 0/0:590:587,2:587:23413:2:82:0,-169.923,-2097.36 0/0:552:550,2:550:21970:2:82:0,-158.389,-1967.61 0/0:909:908,1:908:36070:1:40:0,-269.641,-3239.04 0/0:242:241,0:241:9642:0:0:0,-72.5482,-866.934 0/1:387:353,34:353:14080:34:1368:-6.87947,0,-1149.64 dDocent_Contig_1895 98 . N A 351.929 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=11;CIGAR=1X;DP=11;DPB=11;DPRA=0;EPP=26.8965;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=364;QR=0;RO=0;RPL=11;RPP=26.8965;RPPR=0;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:64:-6.07837,-0.60206,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:3:0,3:0:0:3:92:-8.58442,-0.90309,0 1/1:2:0,2:0:0:2:71:-6.74206,-0.60206,0 1/1:3:0,3:0:0:3:103:-9.61002,-0.90309,0 dDocent_Contig_1896 52 . T C 33595.3 . AB=0.594492;ABP=84.6746;AC=8;AF=0.666667;AN=12;AO=1080;CIGAR=1X1M1X;DP=1537;DPB=1537;DPRA=0;EPP=2348.2;EPPR=982.344;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997222;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=42049;QR=17602;RO=451;RPL=1080;RPP=2348.2;RPPR=982.344;RPR=0;RUN=1;SAF=1080;SAP=2348.2;SAR=0;SRF=451;SRP=982.344;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:265:88,177:88:3408:177:6905:-541.464,0,-227.042 0|1:216:117,98:117:4570:98:3803:-277.199,0,-346.156 0|1:113:69,44:69:2694:44:1720:-121.019,0,-208.593 0|1:459:149,307:149:5828:307:11951:-937.434,0,-386.894 1|1:322:18,303:18:706:303:11809:-998.283,-32.9988,0 1|1:162:10,151:10:396:151:5861:-491.358,-12.8746,0 dDocent_Contig_1897 17 . G A 60.886 . AB=0.112676;ABP=95.5273;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=448;DPB=448;DPRA=0.941645;EPP=20.3821;EPPR=958.458;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.5;PAIREDR=0.327273;PAO=0;PQA=0;PQR=0;PRO=0;QA=318;QR=17478;RO=440;RPL=0;RPP=20.3821;RPPR=958.458;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=440;SRP=958.458;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:76:76,0:76:3033:0:0:0,-22.8783,-273.054 0/0:59:59,0:59:2334:0:0:0,-17.7608,-210.229 0/0:73:73,0:73:2898:0:0:0,-21.9752,-260.925 0/1:71:63,8:63:2511:8:318:-7.61148,0,-204.753 0/0:77:77,0:77:3043:0:0:0,-23.1793,-273.958 0/0:92:92,0:92:3659:0:0:0,-27.6948,-329.327 dDocent_Contig_1898 32 . G A 240.863 . AB=0.134752;ABP=166.394;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=386;DPB=386;DPRA=1.18079;EPP=46.4397;EPPR=791.255;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=808;QR=14383;RO=363;RPL=0;RPP=46.4397;RPPR=791.255;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=363;SRP=791.255;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:38,0:38:1530:0:0:0,-11.4391,-137.941 0/0:67:66,0:66:2624:0:0:0,-19.868,-235.878 0/0:68:67,1:67:2682:1:41:0,-16.3755,-237.402 0/0:72:70,0:70:2726:0:0:0,-21.0721,-245.062 0/1:78:70,8:70:2757:8:324:-6.04848,0,-224.766 0/1:63:52,11:52:2064:11:443:-21.2597,0,-166.98 dDocent_Contig_1899 19 . G T 809.059 . AB=0.193694;ABP=183.927;AC=4;AF=0.333333;AN=12;AO=43;CIGAR=1X;DP=364;DPB=364;DPRA=0.78169;EPP=96.3836;EPPR=700.053;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.883721;PAIREDR=0.962617;PAO=0;PQA=0;PQR=0;PRO=0;QA=1706;QR=12670;RO=321;RPL=0;RPP=96.3836;RPPR=700.053;RPR=43;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=321;SRP=700.053;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:46:36,10:36:1433:10:407:-23.143,0,-115.375 0/1:90:78,12:78:3088:12:474:-15.9139,0,-250.908 0/1:37:29,8:29:1139:8:322:-18.21,0,-91.6562 0/1:49:36,13:36:1418:13:503:-30.8608,0,-113.13 0/0:63:63,0:63:2462:0:0:0,-18.9649,-221.735 0/0:79:79,0:79:3130:0:0:0,-23.7814,-281.785 dDocent_Contig_1900 13 . T C 3902.57 . AB=0.221681;ABP=555.397;AC=2;AF=0.166667;AN=12;AO=183;CIGAR=1X;DP=2268;DPB=2268;DPRA=1.30957;EPP=400.39;EPPR=4513.18;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997602;PAO=0;PQA=0;PQR=0;PRO=0;QA=7155;QR=83023;RO=2085;RPL=0;RPP=400.39;RPPR=4530.53;RPR=183;RUN=1;SAF=183;SAP=400.39;SAR=0;SRF=2083;SRP=4513.18;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:347:347,0:347:13841:0:0:0,-104.457,-1244.67 0/0:465:464,1:464:18415:1:38:0,-136.182,-1652.07 0/0:270:270,0:270:10818:0:0:0,-81.2781,-972.878 0/0:365:365,0:365:14517:0:0:0,-109.876,-1305.43 0/1:430:348,82:348:13888:82:3238:-162.06,0,-1119.45 0/1:391:291,100:291:11544:100:3879:-231.418,0,-920.474 dDocent_Contig_1901 18 . T A 120028 . AB=0.816541;ABP=2318.04;AC=8;AF=0.666667;AN=12;AO=3645;CIGAR=1X;DP=4137;DPB=4137;DPRA=0;EPP=7918.03;EPPR=1060.52;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=142505;QR=18359;RO=487;RPL=0;RPP=7918.03;RPPR=1060.52;RPR=3645;RUN=1;SAF=3645;SAP=7918.03;SAR=0;SRF=487;SRP=1060.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:530:114,415:114:4264:415:16183:-1295.78,0,-224.191 0/1:776:211,565:211:7948:565:22112:-1754.9,0,-481.526 0/1:609:87,522:87:3315:522:20537:-1663.45,0,-115.129 0/1:745:74,670:74:2795:670:26287:-2139.45,0,-27.3613 1/1:716:0,714:0:0:714:27880:-2506.93,-214.935,0 1/1:761:1,759:1:37:759:29506:-2649.52,-225.47,0 dDocent_Contig_1902 18 . G T 136.574 . AB=0.104712;ABP=262.234;AC=1;AF=0.0833333;AN=12;AO=38;CIGAR=1X;DP=1894;DPB=1894;DPRA=0.349782;EPP=85.5263;EPPR=4028.92;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0263158;PAIREDR=0.997303;PAO=0;PQA=0;PQR=0;PRO=0;QA=1535;QR=72603;RO=1854;RPL=0;RPP=85.5263;RPPR=4028.92;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=1854;SRP=4028.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:196:191,5:191:7427:5:201:0,-40.5314,-649.682 0/0:182:181,1:181:7096:1:41:0,-50.6929,-634.258 0/0:137:132,5:132:5163:5:205:0,-22.4061,-445.748 0/1:191:171,20:171:6745:20:804:-15.1803,0,-549.31 0/0:499:491,7:491:19263:7:284:0,-124.126,-1706.32 0/0:689:688,0:688:26909:0:0:0,-207.109,-2419.4 dDocent_Contig_1903 8 . T C 29506.3 . AB=0.879121;ABP=343.836;AC=10;AF=0.833333;AN=12;AO=915;CIGAR=1X;DP=983;DPB=983;DPRA=0;EPP=1989.91;EPPR=150.67;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=35102;QR=2622;RO=68;RPL=0;RPP=1989.91;RPPR=150.67;RPR=915;RUN=1;SAF=915;SAP=1989.91;SAR=0;SRF=68;SRP=150.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:110:14,96:14:540:96:3684:-298.558,0,-15.8318 1/1:160:8,152:8:310:152:5797:-493.417,-19.9012,0 1/1:178:14,164:14:546:164:6275:-515.191,-4.09697,0 0/1:163:19,144:19:733:144:5534:-448.969,0,-17.233 1/1:164:10,154:10:377:154:5928:-499.179,-15.0896,0 1/1:208:3,205:3:116:205:7884:-698.542,-51.7965,0 dDocent_Contig_1904 68 . T G 23994.3 . AB=0.792148;ABP=645.014;AC=8;AF=0.666667;AN=12;AO=829;CIGAR=1X;DP=1009;DPB=1009;DPRA=0;EPP=1803.16;EPPR=391.704;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=29629;QR=6407;RO=179;RPL=829;RPP=1803.16;RPPR=391.704;RPR=0;RUN=1;SAF=829;SAP=1803.16;SAR=0;SRF=179;SRP=391.704;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:62:0,62:0:0:62:2225:-200.506,-18.6639,0 0/1:137:21,116:21:765:116:4133:-330.902,0,-27.9355 0/1:94:15,79:15:545:79:2827:-226.363,0,-21.0897 1/1:81:0,81:0:0:81:2878:-259.249,-24.3834,0 0/1:339:72,267:72:2564:267:9509:-753.69,0,-128.945 0/1:296:71,224:71:2533:224:8057:-635.943,0,-139.036 dDocent_Contig_1905 168 . C T 103.157 . AB=0.333333;ABP=5.9056;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=157;DPB=157;DPRA=0.413793;EPP=11.6962;EPPR=335.246;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.784314;PAO=0;PQA=0;PQR=0;PRO=0;QA=164;QR=6131;RO=153;RPL=4;RPP=11.6962;RPPR=335.246;RPR=0;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=335.246;SRR=153;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:8,4:8:317:4:164:-11.5375,0,-25.2824 0/0:40:40,0:40:1610:0:0:0,-12.0412,-145.129 0/0:19:19,0:19:761:0:0:0,-5.71957,-68.8084 0/0:22:22,0:22:894:0:0:0,-6.62266,-80.7655 0/0:23:23,0:23:925:0:0:0,-6.92369,-83.5502 0/0:41:41,0:41:1624:0:0:0,-12.3422,-146.39 dDocent_Contig_1906 10 . C A 55687.8 . AB=0.81201;ABP=974.577;AC=8;AF=0.666667;AN=12;AO=1657;CIGAR=1X;DP=1882;DPB=1882;DPRA=0;EPP=3601.14;EPPR=491.592;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0.997586;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=66216;QR=9033;RO=225;RPL=0;RPP=3601.14;RPPR=491.592;RPR=1657;RUN=1;SAF=1657;SAP=3601.14;SAR=0;SRF=225;SRP=491.592;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:188:54,134:54:2160:134:5327:-422.675,0,-137.978 0/1:443:46,397:46:1840:397:15849:-1291.81,0,-32.451 0/1:198:54,144:54:2165:144:5783:-460.658,0,-135.416 0/1:320:62,258:62:2505:258:10320:-831.787,0,-129.249 1/1:434:0,434:0:0:434:17359:-1560.89,-130.647,0 1/1:299:9,290:9:363:290:11578:-1008.18,-56.9739,0 dDocent_Contig_1907 70 . G A 131.883 . AB=0.123711;ABP=122.307;AC=1;AF=0.0833333;AN=12;AO=44;CIGAR=1X;DP=891;DPB=891;DPRA=1.12985;EPP=98.5551;EPPR=1840.08;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.977273;PAIREDR=0.992908;PAO=0;PQA=0;PQR=0;PRO=0;QA=1710;QR=32463;RO=846;RPL=44;RPP=98.5551;RPPR=1840.08;RPR=0;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=846;SRP=1840.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:141:134,7:134:4964:7:273:0,-17.512,-421.864 0/0:236:228,7:228:8571:7:274:0,-45.837,-746.178 0/0:93:90,3:90:3575:3:120:0,-16.8085,-310.606 0/0:134:134,0:134:5203:0:0:0,-40.338,-468.165 0/1:97:85,12:85:3287:12:484:-14.7111,0,-266.705 0/0:190:175,15:175:6863:15:559:0,-6.55363,-566.744 dDocent_Contig_1908 33 . T C 484.191 . AB=0.106383;ABP=1141.51;AC=2;AF=0.166667;AN=12;AO=156;CIGAR=1X;DP=2989;DPB=2989;DPRA=0.786469;EPP=341.76;EPPR=6152.62;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5921;QR=112267;RO=2832;RPL=0;RPP=341.76;RPPR=6152.62;RPR=156;RUN=1;SAF=156;SAP=341.76;SAR=0;SRF=2832;SRP=6152.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:388:347,41:347:13697:41:1537:-21.7827,0,-1114.96 0/0:480:454,26:454:17969:26:954:0,-58.3399,-1529.65 0/0:467:430,37:430:17055:37:1450:0,-9.81477,-1402.86 0/1:458:409,49:409:16275:49:1861:-29.8583,0,-1325.61 0/0:606:605,0:605:23944:0:0:0,-182.123,-2152.83 0/0:590:587,3:587:23327:3:119:0,-166.513,-2086.35 dDocent_Contig_1909 14 . A G 1127.3 . AB=0.135364;ABP=685.54;AC=1;AF=0.0833333;AN=12;AO=88;CIGAR=1M3I3M1X;DP=3300;DPB=3352.8;DPRA=1.17822;EPP=194.1;EPPR=6912.64;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999686;PAO=0;PQA=0;PQR=0;PRO=0;QA=3521;QR=125760;RO=3182;RPL=0;RPP=194.1;RPPR=6912.64;RPR=88;RUN=1;SAF=88;SAP=194.1;SAR=0;SRF=3182;SRP=6912.64;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:520:516,0:516:20388:0:0:0,-155.331,-1833.01 0|0:470:465,5:465:18423:5:200:0,-123.104,-1638.34 0|0:544:541,0:541:21309:0:0:0,-162.857,-1915.87 0|0:451:451,0:451:17842:0:0:0,-135.765,-1604.48 0|0:724:712,3:712:28163:3:118:0,-204.631,-2521.39 0|1:591:497,80:497:19635:80:3203:-114.253,0,-1591.62 dDocent_Contig_1910 10 . A G 2470.25 . AB=0.0382979;ABP=438.127;AC=0;AF=0;AN=12;AO=9;CIGAR=1X1M1X;DP=340;DPB=340;DPRA=0;EPP=22.5536;EPPR=455.032;GTI=0;LEN=1;MEANALT=2;MQM=30.6667;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.909091;PAO=0;PQA=0;PQR=0;PRO=0;QA=344;QR=8678;RO=220;RPL=0;RPP=22.5536;RPPR=480.734;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=217;SRP=455.032;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:49:28,0,21:28:1102:0,21:0,770:-53.25,-61.6788,-152.344,0,-91.0382,-84.7166 0|0:75:42,1,32:42:1649:1,32:39,1221:-81.174,-91.8004,-227.133,0,-133.729,-126.113 0|0:34:21,1,12:21:817:1,12:38,452:-30.0955,-34.4107,-101.254,0,-65.248,-63.6448 0|0:56:41,0,14:41:1632:0,14:0,526:-29.8276,-42.1698,-176.566,0,-134.366,-130.151 0|0:49:37,1,11:37:1455:1,11:40,416:-20.7432,-29.3633,-148.77,0,-117.236,-116.444 0|0:77:51,6,20:51:2023:6,20:227,736:-43.1567,-43.8022,-208.546,0,-151.894,-160.583 dDocent_Contig_1911 42 . G C 89747.4 . AB=0.719478;ABP=1637.71;AC=6;AF=0.5;AN=12;AO=2811;CIGAR=1X1M;DP=3907;DPB=3907;DPRA=0;EPP=6080.99;EPPR=2183.17;GTI=0;LEN=1;MEANALT=2.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.999289;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=112733;QR=39281;RO=1004;RPL=3;RPP=6080.99;RPPR=2183.17;RPR=2808;RUN=1;SAF=2811;SAP=6107.02;SAR=0;SRF=1004;SRP=2183.17;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:545:219,0,325:219:8585:0,325:0,13073:-1011.66,-1077.58,-1783.51,0,-706.174,-608.34 0|1:621:187,38,394:187:7316:38,394:1513,15836:-1248.65,-1180.37,-1770.4,0,-476.893,-482.866 0|1:359:111,25,222:111:4392:25,222:1010,8970:-706.064,-656.213,-1010.12,0,-278.165,-294.602 0|1:556:217,21,317:217:8477:21,317:821,12645:-975.989,-973.826,-1664.33,0,-629.343,-601.403 0|1:855:109,0,745:109:4236:0,745:0,29847:-2426.04,-2458.86,-2806.89,0,-348.098,-123.831 0|1:971:161,1,808:161:6275:1,808:23,32362:-2617.55,-2664.25,-3179.66,0,-514.038,-272.574 dDocent_Contig_1912 33 . C T 53.5931 . AB=0.10084;ABP=167.695;AC=2;AF=0.166667;AN=12;AO=25;CIGAR=1X;DP=381;DPB=381;DPRA=2.62222;EPP=57.2971;EPPR=750.096;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.84;PAIREDR=0.90625;PAO=0;PQA=0;PQR=0;PRO=0;QA=1005;QR=13987;RO=352;RPL=0;RPP=57.2971;RPPR=767.369;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=350;SRP=750.096;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:75:68,7:68:2706:7:286:-3.53757,0,-221.084 0/0:110:100,7:100:3925:7:285:0,-6.5921,-327.22 0/1:44:39,5:39:1569:5:199:-5.04143,0,-128.202 0/0:83:78,4:78:3132:4:154:0,-10.7217,-267.747 0/0:42:40,2:40:1582:2:81:0,-4.95753,-134.935 0/0:27:27,0:27:1073:0:0:0,-8.12781,-96.8533 dDocent_Contig_1913 8 . C T 13158.2 . AB=0.0694165;ABP=1603.73;AC=0;AF=0;AN=12;AO=69;CIGAR=1X3M1X;DP=1129;DPB=1129;DPRA=0;EPP=152.842;EPPR=1297.21;GTI=0;LEN=1;MEANALT=2.4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.993289;PAO=0;PQA=0;PQR=0;PRO=0;QA=2681;QR=23117;RO=596;RPL=0;RPP=152.842;RPPR=1297.21;RPR=69;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=596;SRP=1297.21;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:235:95,22,118:95:3719:22,118:846,4647:-353.635,-312.782,-611.951,0,-236.347,-270.276 0|0:211:85,4,121:85:3330:4,121:152,4823:-371.547,-384.672,-657.293,0,-261.378,-237.416 0|0:135:66,0,66:66:2544:0,66:0,2668:-200.186,-220.054,-428.933,0,-208.961,-189.093 0|0:178:119,20,39:119:4579:20,39:776,1582:-94.6541,-66.7265,-436.615,0,-312.165,-364.181 0|0:188:127,4,57:127:4923:4,57:156,2215:-143.737,-169.145,-572.383,0,-391.617,-387.281 0|0:182:104,19,58:104:4022:19,58:751,2359:-163.286,-132.793,-457.409,0,-268.537,-312.882 dDocent_Contig_1914 15 . C A 39194.6 . AB=0.117057;ABP=2288.11;AC=3;AF=0.25;AN=12;AO=210;CIGAR=1M2D1M1X1M1X7M;DP=1794;DPB=1563.29;DPRA=0;EPP=459.02;EPPR=302.673;GTI=0;LEN=1;MEANALT=7;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8260;QR=5428;RO=138;RPL=0;RPP=459.02;RPPR=302.673;RPR=210;RUN=1;SAF=210;SAP=459.02;SAR=0;SRF=138;SRP=302.673;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:224:33,30,13,1,136:33:1307:30,13,1,136:1176,520,40,5212:-417.742,-330.972,-429.517,-384.841,-395.713,-488.503,-424.38,-435.253,-489.121,-531.655,0,-10.874,-64.7406,-104.281,-66.6356 1|0:334:23,48,0,5,250:23:913:48,0,5,250:1892,0,196,9709:-871.221,-722.49,-783.2,-878.144,-797.65,-953.304,-862.026,-781.532,-937.186,-935.681,-80.4948,0,-155.656,-139.538,-80.398 1|0:263:30,38,0,1,163:30:1173:38,0,1,163:1498,0,10,6344:-539.07,-424.858,-509.855,-548.101,-521.295,-644.537,-547.503,-520.697,-643.939,-643.638,-26.8081,0,-123.246,-122.65,-74.1778 1|0:378:35,46,9,40,212:35:1375:46,9,40,212:1809,361,1484,8110:-690.541,-552.28,-651.523,-671.333,-635.626,-781.714,-579.678,-543.971,-663.023,-680.726,-35.7073,0,-119.053,-27.4015,-84.9796 0|0:273:2,41,68,0,162:2:76:41,68,0,162:1608,2701,0,6206:-724.745,-593.114,-587.004,-502.993,-376.991,-488.755,-725.347,-599.346,-509.225,-731.579,-216.122,-90.1239,0,-222.354,-173.588 0|0:322:15,7,65,64,167:15:584:7,65,64,167:277,2559,2468,6447:-687.362,-669.08,-714.967,-481.376,-506.573,-509.804,-489.24,-514.437,-326.733,-517.968,-162.51,-187.707,0,-7.86741,-160.232 dDocent_Contig_1915 18 . T A 328.032 . AB=0.165289;ABP=120.754;AC=2;AF=0.166667;AN=12;AO=32;CIGAR=1X;DP=373;DPB=373;DPRA=1.35417;EPP=72.4974;EPPR=743.482;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.994135;PAO=0;PQA=0;PQR=0;PRO=0;QA=1287;QR=13677;RO=341;RPL=0;RPP=72.4974;RPPR=743.482;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=341;SRP=743.482;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:98:93,5:93:3712:5:205:0,-10.6659,-315.253 0/1:85:69,16:69:2761:16:636:-31.9858,0,-223.016 0/1:36:32,4:32:1290:4:161:-4.03819,0,-105.527 0/0:51:47,4:47:1891:4:162:0,-0.385574,-155.422 0/0:55:52,3:52:2107:3:123:0,-5.09186,-178.336 0/0:48:48,0:48:1916:0:0:0,-14.4494,-172.638 dDocent_Contig_1916 15 . G A 13286.9 . AB=0.281184;ABP=789.864;AC=6;AF=0.5;AN=12;AO=532;CIGAR=1X;DP=1892;DPB=1892;DPRA=0;EPP=1158.23;EPPR=2954.04;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=21212;QR=54211;RO=1359;RPL=0;RPP=1158.23;RPPR=2954.04;RPR=532;RUN=1;SAF=532;SAP=1158.23;SAR=0;SRF=1359;SRP=2954.04;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:189:118,71:118:4712:71:2837:-198.53,0,-367.095 0/1:278:187,91:187:7434:91:3659:-245.638,0,-584.999 0/1:267:192,75:192:7718:75:3020:-191.508,0,-613.823 0/1:432:284,148:284:11292:148:5859:-397.075,0,-885.465 0/1:376:328,48:328:13095:48:1919:-59.7158,0,-1064.4 0/1:350:250,99:250:9960:99:3918:-247.446,0,-790.597 dDocent_Contig_1917 23 . A T 417.277 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=45;CIGAR=1X2M1X;DP=1411;DPB=1411;DPRA=1.15111;EPP=100.727;EPPR=2908.44;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.964873;PAO=0;PQA=0;PQR=0;PRO=0;QA=1792;QR=52643;RO=1338;RPL=0;RPP=100.727;RPPR=2908.44;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=1338;SRP=2908.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:379:366,11,0:366:14317:11,0:441,0:0,-73.8295,-1247.55,-110.177,-1250.87,-1287.2 0|0:280:262,17,0:262:10356:17,0:686,0:0,-22.3261,-869.376,-78.8699,-874.494,-931.044 0|0:147:142,5,0:142:5614:5,0:199,0:0,-25.9625,-486.824,-42.7463,-488.329,-504.715 0|0:230:217,12,0:217:8510:12,0:466,0:0,-27.0566,-723.221,-65.3235,-726.834,-765.12 0|0:225:225,0,0:225:8860:0,0:0,0:0,-67.7317,-796.958,-67.7317,-796.958,-796.958 0|0:150:126,0,24:126:4986:0,24:0,979:-43.2506,-81.1803,-491.496,0,-410.721,-403.496 dDocent_Contig_1918 14 . G A 30.8404 . AB=0.103448;ABP=82.2316;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=408;DPB=408;DPRA=0.945848;EPP=22.5536;EPPR=869.428;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.777778;PAIREDR=0.759398;PAO=0;PQA=0;PQR=0;PRO=0;QA=362;QR=15939;RO=399;RPL=0;RPP=22.5536;RPPR=869.428;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=399;SRP=869.428;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:52:52,0:52:2074:0:0:0,-15.6536,-186.842 0/1:58:52,6:52:2090:6:241:-4.60656,0,-170.822 0/0:56:56,0:56:2216:0:0:0,-16.8577,-199.601 0/0:73:70,3:70:2808:3:121:0,-10.6952,-241.541 0/0:75:75,0:75:2991:0:0:0,-22.5772,-269.28 0/0:94:94,0:94:3760:0:0:0,-28.2968,-338.389 dDocent_Contig_1919 20 . C T 166.977 . AB=0.100427;ABP=652.021;AC=1;AF=0.0833333;AN=12;AO=117;CIGAR=1X;DP=3230;DPB=3230;DPRA=0;EPP=257.073;EPPR=6762.8;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.965812;PAIREDR=0.999679;PAO=0;PQA=0;PQR=0;PRO=0;QA=4378;QR=124251;RO=3113;RPL=0;RPP=257.073;RPPR=6762.8;RPR=117;RUN=1;SAF=117;SAP=257.073;SAR=0;SRF=3113;SRP=6762.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:556:531,25:531:21120:25:933:0,-83.0992,-1814.75 0/0:624:590,34:590:23601:34:1265:0,-73.7144,-2007.89 0/1:468:421,47:421:16817:47:1765:-18.2205,0,-1371.29 0/0:562:555,7:555:22258:7:267:0,-144.788,-1976.88 0/0:552:550,2:550:21905:2:73:0,-159.238,-1962.62 0/0:468:466,2:466:18550:2:75:0,-133.762,-1660.86 dDocent_Contig_1920 18 . C T 37158.8 . AB=0.00882168;ABP=3328.61;AC=0;AF=0;AN=12;AO=39;CIGAR=2M1X4M1X4M;DP=3037;DPB=3026.08;DPRA=0;EPP=87.6977;EPPR=480.734;GTI=0;LEN=1;MEANALT=22.6;MQM=19.5897;MQMR=56.7;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=764;QR=8449;RO=220;RPL=0;RPP=87.6977;RPPR=480.734;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=220;SRP=480.734;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:454:16,0,5,372:16:611:0,5,372:0,145,8669:-644.33,-649.146,-699.278,-638.94,-689.072,-687.567,-61.8242,-111.983,-101.777,0 0|0:633:53,0,0,506:53:2057:0,0,506:0,0,10745:-682.114,-698.069,-865.93,-698.069,-865.93,-865.93,0,-167.914,-167.914,-15.593 0|0:363:18,0,20,273:18:678:0,20,273:0,382,7239:-538.181,-543.6,-596.915,-520.615,-573.931,-567.91,-28.8437,-82.1812,-59.2174,0 0|0:602:56,0,3,454:56:2150:0,3,454:0,56,10209:-659.295,-676.153,-852.009,-672.821,-848.678,-847.774,0,-175.901,-172.571,-39.233 0|0:487:38,36,5,351:38:1457:36,5,351:1409,95,9248:-639.524,-543.657,-649.171,-645.262,-654.307,-760.106,0,-9.04827,-110.665,-10.7001 0|0:498:39,7,6,356:39:1496:7,6,356:275,86,8448:-559.661,-550.451,-665.21,-567.04,-662.955,-682.099,0,-95.9395,-112.536,-9.72641 dDocent_Contig_1921 18 . C A 36178.6 . AB=0.0304183;ABP=3529.08;AC=0;AF=0;AN=12;AO=56;CIGAR=1X1M1X;DP=3313;DPB=3313;DPRA=0;EPP=124.613;EPPR=4024.58;GTI=0;LEN=1;MEANALT=6.66667;MQM=45.1786;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.99946;PAO=0;PQA=0;PQR=0;PRO=0;QA=2226;QR=72946;RO=1852;RPL=0;RPP=124.613;RPPR=4024.58;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=1852;SRP=4024.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:509:256,0,216:256:10100:0,216:0,8637:-634.365,-711.429,-1542.39,0,-830.985,-765.962 0|0:862:467,26,342:467:18473:26,342:1036,13465:-966.993,-1024.91,-2537.29,0,-1437.57,-1417.28 0|0:422:213,0,182:213:8476:0,182:0,7287:-536.175,-600.294,-1298.16,0,-697.885,-643.098 0|0:605:373,10,207:373:14561:10,207:406,8294:-571.052,-650.801,-1844.65,0,-1164.37,-1134.59 0|0:374:242,20,97:242:9506:20,97:784,3825:-241.85,-252.807,-1028.6,0,-719.948,-752.64 0|0:541:301,0,235:301:11830:0,235:0,9343:-678.651,-769.261,-1742.22,0,-973.035,-902.293 dDocent_Contig_1922 60 . A G 568.515 . AB=0.219512;ABP=87.0622;AC=2;AF=0.166667;AN=12;AO=35;CIGAR=1X;DP=482;DPB=482;DPRA=0.987654;EPP=79.0118;EPPR=969.316;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.685714;PAIREDR=0.667416;PAO=0;PQA=0;PQR=0;PRO=0;QA=1388;QR=17120;RO=445;RPL=35;RPP=79.0118;RPPR=969.316;RPR=0;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=445;SRP=969.316;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:57:47,10:47:1812:10:399:-19.1092,0,-146.145 0/0:122:116,5:116:4497:5:197:0,-18.4529,-386.651 0/1:66:48,17:48:1857:17:670:-40.9641,0,-147.704 0/0:75:72,3:72:2778:3:122:0,-11.2048,-238.785 0/0:88:88,0:88:3369:0:0:0,-26.4906,-303.284 0/0:74:74,0:74:2807:0:0:0,-22.2762,-252.766 dDocent_Contig_1923 30 . G A 18186.4 . AB=0.252427;ABP=1648.06;AC=6;AF=0.5;AN=12;AO=780;CIGAR=1X;DP=3090;DPB=3090;DPRA=0;EPP=18.2551;EPPR=22.0894;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0384615;PAIREDR=0.0331969;PAO=0;PQA=0;PQR=0;PRO=0;QA=30326;QR=86844;RO=2199;RPL=0;RPP=1696.76;RPPR=4778.08;RPR=780;RUN=1;SAF=353;SAP=18.2551;SAR=427;SRF=1030;SRP=22.0894;SRR=1169;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:628:451,154:451:17774:154:5983:-355.81,0,-1415.77 0/1:736:478,224:478:18979:224:8752:-575.588,0,-1494.91 0/1:442:307,117:307:12118:117:4524:-279.119,0,-961.751 0/1:410:292,103:292:11526:103:4018:-242.344,0,-917.273 0/1:424:354,66:354:13803:66:2550:-102.843,0,-1114.48 0/1:450:317,116:317:12644:116:4499:-274.156,0,-1006.31 dDocent_Contig_1924 11 . A C 491.491 . AB=0.252874;ABP=49.1603;AC=3;AF=0.25;AN=12;AO=24;CIGAR=1X;DP=168;DPB=168;DPRA=1.02727;EPP=55.1256;EPPR=313.531;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.958333;PAIREDR=0.713287;PAO=0;PQA=0;PQR=0;PRO=0;QA=966;QR=5608;RO=143;RPL=0;RPP=55.1256;RPPR=313.531;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=143;SRP=313.531;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:12,4:12:478:4:162:-10.1503,0,-38.5548 0/0:26:24,2:24:919:2:82:0,-0.0471021,-75.2309 0/0:31:31,0:31:1226:0:0:0,-9.33193,-110.613 0/1:40:28,11:28:1072:11:446:-28.3469,0,-84.6099 0/1:31:24,7:24:952:7:276:-15.8731,0,-76.6529 0/0:24:24,0:24:961:0:0:0,-7.22472,-86.7915 dDocent_Contig_1925 98 . N T 1520.78 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=52;CIGAR=1X;DP=52;DPB=52;DPRA=0;EPP=115.927;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1665;QR=0;RO=0;RPL=52;RPP=115.927;RPPR=0;RPR=0;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:14:0,14:0:0:14:474:-42.9844,-4.21442,0 1/1:11:0,11:0:0:11:356:-32.3542,-3.31133,0 1/1:25:0,25:0:0:25:783:-70.761,-7.52575,0 1/1:1:0,1:0:0:1:17:-1.69998,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_1926 65 . G A 266.911 . AB=0.117424;ABP=338.634;AC=2;AF=0.166667;AN=12;AO=54;CIGAR=1X;DP=670;DPB=670;DPRA=1.27253;EPP=120.27;EPPR=1340.64;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.977273;PAO=0;PQA=0;PQR=0;PRO=0;QA=2079;QR=24206;RO=616;RPL=54;RPP=120.27;RPPR=1340.64;RPR=0;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=616;SRP=1340.64;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:91:91,0:91:3592:0:0:0,-27.3937,-323.323 0/0:152:139,13:139:5440:13:495:0,-0.861518,-444.564 0/0:64:61,3:61:2432:3:116:0,-8.44914,-208.211 0/0:99:92,7:92:3631:7:260:0,-6.05587,-303.085 0/1:108:94,14:94:3705:14:551:-17.4207,0,-300.982 0/1:156:139,17:139:5406:17:657:-12.4921,0,-439.438 dDocent_Contig_1927 19 . T C 6858.38 . AB=0.705521;ABP=62.8124;AC=8;AF=0.666667;AN=12;AO=204;CIGAR=1X;DP=252;DPB=252;DPRA=0;EPP=445.991;EPPR=107.241;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.583333;PAIREDR=0.6875;PAO=0;PQA=0;PQR=0;PRO=0;QA=8229;QR=1902;RO=48;RPL=0;RPP=445.991;RPPR=107.241;RPR=204;RUN=1;SAF=204;SAP=445.991;SAR=0;SRF=48;SRP=107.241;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:8,23:8:313:23:936:-75.2089,0,-19.1973 0/1:54:17,37:17:680:37:1503:-119.25,0,-45.2737 0/1:26:8,18:8:303:18:717:-57.0304,0,-19.7955 0/1:52:15,37:15:606:37:1489:-118.6,0,-39.2245 1/1:35:0,35:0:0:35:1399:-126.157,-10.5361,0 1/1:54:0,54:0:0:54:2185:-196.814,-16.2556,0 dDocent_Contig_1928 49 . T A 4564.2 . AB=0.1546;ABP=1906.58;AC=3;AF=0.25;AN=12;AO=331;CIGAR=1X;DP=4452;DPB=4452;DPRA=0;EPP=721.768;EPPR=7294.48;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13145;QR=163031;RO=4119;RPL=0;RPP=721.768;RPPR=7294.48;RPR=331;RUN=1;SAF=331;SAP=721.768;SAR=0;SRF=4119;SRP=8947.31;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:703:587,115:587:23190:115:4549:-197.773,0,-1873.58 0/0:748:705,43:705:27892:43:1716:0,-70.5054,-2353.2 0/1:401:346,55:346:13646:55:2165:-74.3089,0,-1106.42 0/1:733:618,114:618:24455:114:4560:-189.559,0,-1978.08 0/0:1037:1035,2:1035:40959:2:74:0,-305.144,-3675.52 0/0:830:828,2:828:32889:2:81:0,-242.169,-2949.3 dDocent_Contig_1929 98 . N A 102.493 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=103;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1930 20 . A G 1266.49 . AB=0.25;ABP=120.27;AC=3;AF=0.25;AN=12;AO=54;CIGAR=1X;DP=383;DPB=383;DPRA=1.29341;EPP=120.27;EPPR=717.425;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.4468;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.984802;PAO=0;PQA=0;PQR=0;PRO=0;QA=2177;QR=13105;RO=329;RPL=0;RPP=120.27;RPPR=717.425;RPR=54;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=329;SRP=717.425;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:55:47,8:47:1886:8:316:-12.2471,0,-153.385 0/0:37:37,0:37:1481:0:0:0,-11.1381,-133.535 0/0:38:38,0:38:1518:0:0:0,-11.4391,-136.86 0/0:92:92,0:92:3657:0:0:0,-27.6948,-329.153 0/1:104:67,37:67:2651:37:1503:-104.201,0,-200.211 0/1:57:48,9:48:1912:9:358:-15.4232,0,-152.866 dDocent_Contig_1931 13 . C T 546.46 . AB=0.198582;ABP=114.279;AC=4;AF=0.333333;AN=12;AO=28;CIGAR=1X;DP=203;DPB=203;DPRA=1.1371;EPP=63.8115;EPPR=383.018;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.964286;PAIREDR=0.788571;PAO=0;PQA=0;PQR=0;PRO=0;QA=1122;QR=6983;RO=175;RPL=0;RPP=63.8115;RPPR=383.018;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=175;SRP=383.018;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1086:0:0:0,-8.12781,-98.0274 0/1:35:32,3:32:1290:3:121:-0.744147,0,-105.825 0/0:35:35,0:35:1405:0:0:0,-10.536,-126.703 0/1:33:30,3:30:1174:3:122:-1.4385,0,-96.01 0/1:38:28,10:28:1122:10:403:-25.1904,0,-89.8224 0/1:35:23,12:23:906:12:476:-32.6542,0,-71.3093 dDocent_Contig_1932 98 . N G 150.706 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=5;CIGAR=2X;DP=5;DPB=5.5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=8.07091;PAIRED=0.8;PAIREDR=0;PAO=1;PQA=17;PQR=0;PRO=0;QA=166;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:5:0,5:0:0:5:166:-15.0705,-1.50515,0 .:.:.:.:.:.:.:. dDocent_Contig_1933 10 . A G 11585.5 . AB=0.418108;ABP=60.2705;AC=6;AF=0.5;AN=12;AO=411;CIGAR=1X;DP=983;DPB=983;DPRA=0;EPP=869.618;EPPR=965.186;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.7007;MQMR=59.5779;NS=6;NUMALT=1;ODDS=0;PAIRED=0.138686;PAIREDR=0.355517;PAO=0;PQA=0;PQR=0;PRO=0;QA=16288;QR=22553;RO=571;RPL=0;RPP=895.485;RPPR=1242.92;RPR=411;RUN=1;SAF=408;SAP=869.618;SAR=3;SRF=537;SRP=965.186;SRR=34;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:117:69,48:69:2719:48:1912:-137.058,0,-208.575 0/1:180:89,91:89:3492:91:3605:-269.666,0,-260.154 0/1:157:96,61:96:3796:61:2441:-172.556,0,-294.397 0/1:205:137,67:137:5402:67:2638:-175.548,0,-424.222 0/1:135:74,61:74:2916:61:2389:-174.531,0,-221.773 0/1:189:106,83:106:4228:83:3303:-240.415,0,-319.927 dDocent_Contig_1934 7 . T C 99.7891 . AB=0.113043;ABP=152.578;AC=1;AF=0.0833333;AN=12;AO=29;CIGAR=1X;DP=848;DPB=848;DPRA=0.833333;EPP=65.983;EPPR=1779.27;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.931034;PAIREDR=0.99511;PAO=0;PQA=0;PQR=0;PRO=0;QA=1115;QR=31317;RO=818;RPL=0;RPP=65.983;RPPR=1779.27;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=818;SRP=1779.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:115:101,13:101:3868:13:506:-11.2008,0,-313.53 0/0:100:95,5:95:3612:5:194:0,-12.2702,-307.366 0/0:180:172,8:172:6643:8:301:0,-26.7387,-570.311 0/0:135:132,3:132:5028:3:114:0,-30.0068,-441.915 0/0:160:160,0:160:6115:0:0:0,-48.1648,-550.292 0/0:158:158,0:158:6051:0:0:0,-47.5627,-544.535 dDocent_Contig_1935 12 . T A 19233.9 . AB=0.5039;ABP=3.17968;AC=6;AF=0.5;AN=12;AO=646;CIGAR=1X;DP=1282;DPB=1282;DPRA=0;EPP=1405.78;EPPR=1384.07;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998452;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=25787;QR=24815;RO=636;RPL=0;RPP=1405.78;RPPR=1384.07;RPR=646;RUN=1;SAF=646;SAP=1405.78;SAR=0;SRF=636;SRP=1384.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:248:80,168:80:3034:168:6707:-528.681,0,-198.57 0/1:307:120,187:120:4721:187:7479:-580.309,0,-332.442 0/1:177:89,88:89:3468:88:3529:-264.352,0,-258.919 0/1:175:87,88:87:3411:88:3477:-260.287,0,-254.399 0/1:122:82,40:82:3187:40:1617:-109.03,0,-250.214 0/1:253:178,75:178:6994:75:2978:-191.951,0,-553.036 dDocent_Contig_1936 16 . G A 18284.3 . AB=0.189617;ABP=4177.69;AC=6;AF=0.5;AN=12;AO=946;CIGAR=1X3M1X;DP=4989;DPB=4989;DPRA=0;EPP=2057.22;EPPR=8638.96;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=1;PAIREDR=0.999749;PAO=0;PQA=0;PQR=0;PRO=0;QA=36939;QR=152408;RO=3977;RPL=0;RPP=2057.22;RPPR=8638.96;RPR=946;RUN=1;SAF=946;SAP=2057.22;SAR=0;SRF=3977;SRP=8638.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:588:481,104:481:18445:104:4078:-190.598,0,-1482.58 0|1:955:760,190:760:29121:190:7384:-378.038,0,-2332.77 0|1:523:385,127:385:14699:127:4945:-290.513,0,-1167.69 0|1:937:762,168:762:29199:168:6561:-310.068,0,-2345.81 0|1:960:688,238:688:26450:238:9302:-557.638,0,-2099.71 0|1:1026:901,119:901:34494:119:4669:-112.794,0,-2794.8 dDocent_Contig_1937 98 . N T 203.359 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=209;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:36:-3.59827,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:138:-12.7602,-1.20412,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_1938 7 . T C 522.415 . AB=0.105205;ABP=1225.5;AC=1;AF=0.0833333;AN=12;AO=183;CIGAR=1X;DP=5484;DPB=5484;DPRA=0.698359;EPP=400.39;EPPR=11501;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.999811;PAO=0;PQA=0;PQR=0;PRO=0;QA=6987;QR=202627;RO=5295;RPL=0;RPP=400.39;RPPR=11501;RPR=183;RUN=1;SAF=183;SAP=400.39;SAR=0;SRF=5295;SRP=11501;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:787:728,57:728:27836:57:2183:0,-39.7267,-2306.93 0/0:887:887,0:887:33906:0:0:0,-267.014,-3049.48 0/0:565:534,31:534:20456:31:1188:0,-62.8667,-1732.72 0/1:903:807,95:807:30819:95:3616:-53.7644,0,-2500.08 0/0:1116:1116,0:1116:42833:0:0:0,-335.949,-3852.22 0/0:1226:1223,0:1223:46777:0:0:0,-368.16,-4206.71 dDocent_Contig_1939 33 . T G 24577.3 . AB=0.399728;ABP=195.491;AC=3;AF=0.25;AN=12;AO=884;CIGAR=1X;DP=3015;DPB=3015;DPRA=2.66702;EPP=1922.59;EPPR=4628.25;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.998122;PAO=0;PQA=0;PQR=0;PRO=0;QA=34874;QR=83651;RO=2130;RPL=0;RPP=1922.59;RPPR=4628.25;RPR=884;RUN=1;SAF=884;SAP=1922.59;SAR=0;SRF=2130;SRP=4628.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:248:248,0:248:9699:0:0:0,-74.6554,-872.379 0/1:431:385,46:385:15186:46:1833:-35.4382,0,-1235.9 0/0:228:228,0:228:8916:0:0:0,-68.6348,-801.952 0/0:335:331,3:331:12981:3:111:0,-90.593,-1157.05 0/1:940:633,307:633:24852:307:12065:-802.079,0,-1951.7 0/1:833:305,528:305:12017:528:20865:-1625.43,0,-829.967 dDocent_Contig_1940 11 . A T 1020.09 . AB=0.247253;ABP=103.996;AC=3;AF=0.25;AN=12;AO=52;CIGAR=1X;DP=376;DPB=376;DPRA=0;EPP=115.927;EPPR=706.567;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.807692;PAIREDR=0.635802;PAO=0;PQA=0;PQR=0;PRO=0;QA=2069;QR=12840;RO=324;RPL=0;RPP=115.927;RPPR=706.567;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=324;SRP=706.567;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:61:44,17:44:1716:17:672:-42.4463,0,-136.3 0/1:67:57,10:57:2265:10:397:-15.9189,0,-183.854 0/0:69:68,1:68:2705:1:41:0,-16.6765,-239.478 0/1:54:36,18:36:1453:18:720:-48.8659,0,-114.761 0/0:61:57,4:57:2258:4:158:0,-3.76347,-188.79 0/0:64:62,2:62:2443:2:81:0,-11.5802,-212.34 dDocent_Contig_1941 44 . T C 97.4844 . AB=0.208333;ABP=20.744;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=403;DPB=403;DPRA=1.1;EPP=24.725;EPPR=856.399;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=381;QR=15665;RO=393;RPL=0;RPP=24.725;RPPR=856.399;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=393;SRP=856.399;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:19,5:19:760:5:198:-10.9703,0,-61.4945 0/0:61:60,1:60:2385:1:41:0,-14.2683,-210.708 0/0:62:62,0:62:2483:0:0:0,-18.6639,-223.61 0/0:59:58,1:58:2283:1:19:0,-15.8608,-203.734 0/0:90:89,1:89:3558:1:41:0,-22.9981,-316.158 0/0:107:105,2:105:4196:2:82:0,-24.4305,-369.815 dDocent_Contig_1942 8 . C T 1815.83 . AB=0.180385;ABP=509.656;AC=2;AF=0.166667;AN=12;AO=120;CIGAR=1X;DP=1261;DPB=1261;DPRA=1.74;EPP=263.587;EPPR=2480.66;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4619;QR=43964;RO=1141;RPL=0;RPP=263.587;RPPR=2480.66;RPR=120;RUN=1;SAF=120;SAP=263.587;SAR=0;SRF=1141;SRP=2480.66;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:117:109,8:109:4209:8:310:0,-6.95693,-350.613 0/0:252:251,1:251:9711:1:39:0,-71.963,-869.744 0/0:130:130,0:130:5030:0:0:0,-39.1339,-452.703 0/0:191:183,8:183:7032:8:312:0,-29.0518,-604.298 0/1:249:217,32:217:8364:32:1226:-35.6767,0,-677.562 0/1:322:251,71:251:9618:71:2732:-149.128,0,-768.363 dDocent_Contig_1943 18 . A G 16736.2 . AB=0.186232;ABP=3965.67;AC=6;AF=0.5;AN=12;AO=863;CIGAR=1X;DP=4634;DPB=4634;DPRA=0;EPP=1876.99;EPPR=8182.95;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.993048;PAIREDR=0.999204;PAO=0;PQA=0;PQR=0;PRO=0;QA=34225;QR=149870;RO=3767;RPL=0;RPP=1876.99;RPPR=8182.95;RPR=863;RUN=1;SAF=863;SAP=1876.99;SAR=0;SRF=3767;SRP=8182.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:727:551,175:551:21885:175:6822:-395.025,0,-1749.19 0/1:805:604,199:604:24042:199:7894:-468.087,0,-1919.75 0/1:487:431,56:431:17118:56:2233:-54.5257,0,-1392.66 0/1:774:590,184:590:23480:184:7350:-428.127,0,-1878.2 0/1:1025:917,107:917:36565:107:4227:-72.0142,0,-2979.13 0/1:816:674,142:674:26780:142:5699:-267.067,0,-2162.24 dDocent_Contig_1944 72 . G A 5251.85 . AB=0.043956;ABP=496.173;AC=0;AF=0;AN=12;AO=12;CIGAR=1X1M1X;DP=337;DPB=337;DPRA=0;EPP=29.068;EPPR=298.331;GTI=0;LEN=1;MEANALT=2.4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=450;QR=4953;RO=136;RPL=12;RPP=29.068;RPPR=298.331;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=136;SRP=298.331;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:82:36,2,44:36:1309:2,44:78,1613:-120.963,-125.387,-231.673,0,-100.451,-93.619 0|0:42:18,1,23:18:651:1,23:38,884:-67.1577,-69.4599,-122.278,0,-49.9943,-46.1881 0|0:48:17,3,27:17:593:3,27:115,1045:-80.7303,-76.4108,-123.712,0,-38.7587,-40.0731 0|0:64:30,0,34:30:1111:0,34:0,1301:-98.1007,-107.132,-198.011,0,-91.2549,-81.0199 0|0:65:29,5,31:29:1086:5,31:179,1140:-84.4743,-78.61,-166.048,0,-74.361,-79.6221 0|0:36:6,1,28:6:203:1,28:40,1059:-84.9812,-83.4916,-99.6346,0,-13.1032,-7.97603 dDocent_Contig_1945 98 . N T 234.686 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=245;QR=0;RO=0;RPL=8;RPP=20.3821;RPPR=0;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:94:-8.77149,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:117:-10.8201,-1.20412,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 dDocent_Contig_1946 83 . T C 63305.7 . AB=0.717879;ABP=609.548;AC=11;AF=0.916667;AN=12;AO=1902;CIGAR=1X3M;DP=2327;DPB=2327;DPRA=0;EPP=4133.15;EPPR=274.444;GTI=0;LEN=1;MEANALT=2.83333;MQM=59.9937;MQMR=60;NS=6;NUMALT=2;ODDS=1.11022e-16;PAIRED=0.999474;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=68819;QR=4411;RO=125;RPL=1902;RPP=4133.15;RPPR=274.444;RPR=0;RUN=1;SAF=1902;SAP=4133.15;SAR=0;SRF=125;SRP=274.444;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:245:44,38,163:44:1530:38,163:1290,5779:-457.533,-366.164,-479.119,0,-19.7866,-75.3324 1|1:409:29,86,292:29:1021:86,292:3044,10376:-1001.57,-762.347,-819.577,-164.841,0,-160.059 1|1:247:15,71,161:15:533:71,161:2546,6017:-652.402,-449.274,-471.328,-164.222,0,-159.185 1|1:570:31,97,440:31:1110:97,440:3463,16370:-1522.25,-1249.27,-1310.59,-191.798,0,-149.862 1|1:428:0,0,426:0:0:0,426:0,15239:-1370.82,-1370.82,-1370.82,-128.239,-128.239,0 1|1:428:6,0,420:6:217:0,420:0,15038:-1333.21,-1335.02,-1352.73,-108.613,-126.433,0 dDocent_Contig_1947 33 . A G 317.095 . AB=0.186813;ABP=80.539;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1X;DP=596;DPB=596;DPRA=0.879227;EPP=44.2683;EPPR=1253.78;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.979167;PAO=0;PQA=0;PQR=0;PRO=0;QA=749;QR=22907;RO=576;RPL=0;RPP=44.2683;RPPR=1253.78;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=576;SRP=1253.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:86:86,0:86:3422:0:0:0,-25.8886,-308.029 0/0:82:82,0:82:3259:0:0:0,-24.6845,-293.383 0/0:89:89,0:89:3560:0:0:0,-26.7917,-320.428 0/0:157:157,0:157:6222:0:0:0,-47.2617,-559.733 0/1:91:74,17:74:2945:17:670:-33.2324,0,-237.753 0/0:91:88,2:88:3499:2:79:0,-19.787,-307.555 dDocent_Contig_1948 64 . C A 289.169 . AB=0.220779;ABP=55.1538;AC=2;AF=0.166667;AN=12;AO=19;CIGAR=1X;DP=186;DPB=186;DPRA=1.13793;EPP=44.2683;EPPR=365.646;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.994012;PAO=0;PQA=0;PQR=0;PRO=0;QA=652;QR=6057;RO=167;RPL=19;RPP=44.2683;RPPR=365.646;RPR=0;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=167;SRP=365.646;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:37,0:37:1291:0:0:0,-11.1381,-116.482 0/1:38:28,10:28:993:10:345:-19.9413,0,-78.2397 0/0:22:20,2:20:755:2:45:0,-2.35026,-64.0037 0/1:39:32,7:32:1223:7:262:-12.1974,0,-98.6228 0/0:29:29,0:29:1040:0:0:0,-8.72987,-93.9088 0/0:21:21,0:21:755:0:0:0,-6.32163,-68.2579 dDocent_Contig_1949 12 . A T 6032.28 . AB=0.193632;ABP=1257.71;AC=2;AF=0.166667;AN=12;AO=299;CIGAR=1X;DP=4491;DPB=4491;DPRA=0.986289;EPP=652.281;EPPR=9103.65;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11909;QR=167193;RO=4191;RPL=0;RPP=652.281;RPPR=9103.65;RPR=299;RUN=1;SAF=299;SAP=652.281;SAR=0;SRF=4191;SRP=9103.65;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:691:690,1:690:27495:1:17:0,-206.312,-2470.42 0/0:715:715,0:715:28504:0:0:0,-215.236,-2562.84 0/0:624:624,0:624:24998:0:0:0,-187.843,-2247.6 0/0:922:922,0:922:36876:0:0:0,-277.55,-3315.42 0/1:767:634,133:634:25206:133:5295:-245.509,0,-2035.48 0/1:772:606,165:606:24114:165:6597:-360.941,0,-1935.67 dDocent_Contig_1950 14 . A T 3654.28 . AB=0.174018;ABP=1530.57;AC=2;AF=0.166667;AN=12;AO=288;CIGAR=1X;DP=5703;DPB=5703;DPRA=0.817688;EPP=628.394;EPPR=11384.5;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.7143;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.988914;PAO=0;PQA=0;PQR=0;PRO=0;QA=9628;QR=212200;RO=5412;RPL=0;RPP=628.394;RPPR=11755;RPR=288;RUN=1;SAF=288;SAP=628.394;SAR=0;SRF=5369;SRP=11384.5;SRR=43;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:901:900,0:900:35272:0:0:0,-270.927,-3152.9 0/0:1163:1163,0:1163:45430:0:0:0,-350.098,-4078.09 0/0:834:834,0:834:32900:0:0:0,-251.059,-2947.11 0/0:1150:1148,0:1148:45080:0:0:0,-345.582,-4043.17 0/1:618:546,72:546:21376:72:2416:-31.6547,0,-1730.32 0/1:1037:821,216:821:32142:216:7212:-336.995,0,-2569.29 dDocent_Contig_1951 32 . G A 53.7193 . AB=0.142857;ABP=34.0313;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=96;DPB=96;DPRA=2.05882;EPP=11.6962;EPPR=202.786;GTI=0;LEN=1;MEANALT=1;MQM=55.5;MQMR=58.0761;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=163;QR=3607;RO=92;RPL=0;RPP=11.6962;RPPR=202.786;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=92;SRP=202.786;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:24,4:24:957:4:163:-6.59368,0,-74.9115 0/0:9:9,0:9:334:0:0:0,-2.70927,-30.4044 0/0:3:3,0:3:122:0:0:0,-0.90309,-11.3725 0/0:28:28,0:28:1078:0:0:0,-8.42884,-97.3015 0/0:7:7,0:7:276:0:0:0,-2.10721,-25.05 0/0:21:21,0:21:840:0:0:0,-6.32163,-70.9432 dDocent_Contig_1952 18 . T G 57.0914 . AB=0.153846;ABP=30.0702;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=79;DPB=79;DPRA=2.45283;EPP=11.6962;EPPR=165.871;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=163;QR=3012;RO=75;RPL=0;RPP=11.6962;RPPR=165.871;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=75;SRP=165.871;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:843:0:0:0,-6.32163,-76.1811 0/1:26:22,4:22:887:4:163:-7.23165,0,-72.3084 0/0:9:9,0:9:346:0:0:0,-2.70927,-31.4858 0/0:11:11,0:11:449:0:0:0,-3.31133,-40.7659 0/0:1:1,0:1:40:0:0:0,-0.30103,-3.99568 0/0:11:11,0:11:447:0:0:0,-3.31133,-40.5861 dDocent_Contig_1953 34 . C T 12374.1 . AB=0.307443;ABP=500.587;AC=4;AF=0.333333;AN=12;AO=511;CIGAR=1X;DP=2077;DPB=2077;DPRA=0;EPP=1095.33;EPPR=3403.54;GTI=0;LEN=1;MEANALT=1;MQM=59.9843;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.994129;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=20399;QR=62928;RO=1566;RPL=0;RPP=1112.63;RPPR=3403.54;RPR=511;RUN=1;SAF=509;SAP=1095.33;SAR=2;SRF=1566;SRP=3403.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:346:250,96:250:10009:96:3855:-242.782,0,-795.989 0/1:330:212,118:212:8463:118:4681:-321.865,0,-661.828 0/1:309:226,83:226:9137:83:3301:-204.123,0,-728.71 0/1:560:382,178:382:15378:178:7165:-475.865,0,-1214.17 0/0:183:177,6:177:7139:6:243:0,-32.8403,-619.877 0/0:349:319,30:319:12802:30:1154:0,-0.929314,-1047.08 dDocent_Contig_1954 31 . C G 7747.83 . AB=0.209065;ABP=1300.64;AC=3;AF=0.25;AN=12;AO=436;CIGAR=1X;DP=3112;DPB=3112;DPRA=0;EPP=949.772;EPPR=5809.53;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997008;PAO=0;PQA=0;PQR=0;PRO=0;QA=17223;QR=106297;RO=2674;RPL=0;RPP=949.772;RPPR=5809.53;RPR=436;RUN=1;SAF=436;SAP=949.772;SAR=0;SRF=2674;SRP=5809.53;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:429:383,46:383:15267:46:1803:-33.3396,0,-1243.72 0/0:504:473,31:473:18814:31:1215:0,-42.0935,-1582.11 0/0:280:271,9:271:10734:9:361:0,-51.435,-932.489 0/0:563:536,27:536:21261:27:1076:0,-72.3521,-1814.61 0/1:628:498,129:498:19784:129:5095:-269.49,0,-1590 0/1:708:513,194:513:20437:194:7673:-477.175,0,-1624.61 dDocent_Contig_1955 8 . C A 1541.46 . AB=0.164666;ABP=572.439;AC=2;AF=0.166667;AN=12;AO=133;CIGAR=1X;DP=1633;DPB=1633;DPRA=1.33333;EPP=291.816;EPPR=3260.22;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998667;PAO=0;PQA=0;PQR=0;PRO=0;QA=5121;QR=57874;RO=1500;RPL=0;RPP=291.816;RPPR=3260.22;RPR=133;RUN=1;SAF=133;SAP=291.816;SAR=0;SRF=1500;SRP=3260.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:213:213,0:213:8188:0:0:0,-64.1194,-736.7 0/0:265:255,10:255:9827:10:385:0,-44.7663,-849.071 0/0:231:220,11:220:8508:11:421:0,-31.2954,-727.217 0/0:341:325,16:325:12535:16:622:0,-46.3311,-1071.27 0/1:279:229,50:229:8852:50:1926:-89.5965,0,-712.409 0/1:304:258,46:258:9964:46:1767:-67.7713,0,-804.881 dDocent_Contig_1956 22 . T C 1444.14 . AB=0.141007;ABP=780.994;AC=1;AF=0.0833333;AN=12;AO=191;CIGAR=1X;DP=4410;DPB=4410;DPRA=0.783278;EPP=417.762;EPPR=9160.11;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999526;PAO=0;PQA=0;PQR=0;PRO=0;QA=7636;QR=169002;RO=4217;RPL=0;RPP=417.762;RPPR=9160.11;RPR=191;RUN=1;SAF=191;SAP=417.762;SAR=0;SRF=4217;SRP=9160.11;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:700:670,30:670:26751:30:1204:0,-102.09,-2296.56 0/0:871:827,44:827:33314:44:1752:0,-104.307,-2837.16 0/0:523:505,18:505:20189:18:697:0,-94.396,-1752.21 0/1:695:595,98:595:23859:98:3943:-145.937,0,-1936.24 0/0:897:897,0:897:35890:0:0:0,-270.024,-3226.67 0/0:724:723,1:723:28999:1:40:0,-213.95,-2603.2 dDocent_Contig_1957 98 . N C 2212.48 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=71;CIGAR=1X;DP=71;DPB=71;DPRA=0;EPP=157.185;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2432;QR=0;RO=0;RPL=71;RPP=157.185;RPPR=0;RPR=0;RUN=1;SAF=71;SAP=157.185;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:18:0,18:0:0:18:626:-56.6663,-5.41854,0 1/1:29:0,29:0:0:29:980:-88.5067,-8.72987,0 1/1:10:0,10:0:0:10:348:-31.656,-3.0103,0 1/1:13:0,13:0:0:13:449:-40.7406,-3.91339,0 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_1959 51 . T C 3946.4 . AB=0.230567;ABP=481.595;AC=5;AF=0.416667;AN=12;AO=184;CIGAR=1X;DP=919;DPB=919;DPRA=0;EPP=402.561;EPPR=1599.04;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998639;PAO=0;PQA=0;PQR=0;PRO=0;QA=7378;QR=29404;RO=735;RPL=184;RPP=402.561;RPPR=1599.04;RPR=0;RUN=1;SAF=184;SAP=402.561;SAR=0;SRF=735;SRP=1599.04;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:128:85,43:85:3415:43:1704:-115.056,0,-268.861 0/1:167:120,47:120:4818:47:1871:-118.325,0,-383.237 0/1:109:88,21:88:3512:21:836:-42.7375,0,-283.3 0/1:128:91,37:91:3586:37:1506:-97.2435,0,-284.241 0/1:227:200,27:200:7996:27:1095:-30.4999,0,-650.876 0/0:160:151,9:151:6077:9:366:0,-14.8598,-513.378 dDocent_Contig_1960 76 . G T 42.631 . AB=0.111111;ABP=109.412;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=600;DPB=600;DPRA=1.29885;EPP=29.068;EPPR=1277.66;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.936968;PAO=0;PQA=0;PQR=0;PRO=0;QA=412;QR=20968;RO=587;RPL=12;RPP=29.068;RPPR=1277.66;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=587;SRP=1277.66;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:81:72,9:72:2595:9:328:-5.48493,0,-209.402 0/0:134:131,2:131:4691:2:71:0,-33.6599,-415.577 0/0:77:77,0:77:2759:0:0:0,-23.1793,-248.541 0/0:92:92,0:92:3302:0:0:0,-27.6948,-297.381 0/0:124:123,1:123:4339:1:13:0,-36.0277,-389.362 0/0:92:92,0:92:3282:0:0:0,-27.6948,-295.585 dDocent_Contig_1961 76 . T C 87.8045 . AB=0.4;ABP=3.87889;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=117;DPB=117;DPRA=0.46729;EPP=11.6962;EPPR=231.322;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.982301;PAO=0;PQA=0;PQR=0;PRO=0;QA=144;QR=3811;RO=113;RPL=4;RPP=11.6962;RPPR=248.387;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=111;SRP=231.322;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:39,0:39:1280:0:0:0,-11.7402,-115.491 0/0:33:33,0:33:1123:0:0:0,-9.93399,-101.373 0/0:15:15,0:15:519:0:0:0,-4.51545,-47.0371 0/0:14:14,0:14:474:0:0:0,-4.21442,-42.9835 0/0:6:6,0:6:212:0:0:0,-1.80618,-19.425 0/1:10:6,4:6:203:4:144:-10.3033,0,-15.5917 dDocent_Contig_1962 63 . T A 3546.72 . AB=0.339901;ABP=93.3992;AC=6;AF=0.5;AN=12;AO=138;CIGAR=1X;DP=406;DPB=406;DPRA=0;EPP=302.673;EPPR=584.965;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.992754;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5403;QR=10401;RO=268;RPL=138;RPP=302.673;RPPR=584.965;RPR=0;RUN=1;SAF=138;SAP=302.673;SAR=0;SRF=268;SRP=584.965;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:65:55,10:55:2076:10:386:-15.53,0,-167.511 0/1:55:40,15:40:1519:15:569:-34.9937,0,-120.426 0/1:118:60,58:60:2352:58:2274:-169.307,0,-176.309 0/1:79:62,17:62:2433:17:670:-36.8503,0,-195.333 0/1:59:41,18:41:1622:18:706:-46.104,0,-128.454 0/1:30:10,20:10:399:20:798:-63.1082,0,-27.2375 dDocent_Contig_1963 107 . N T 692.906 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=23;CIGAR=1X;DP=23;DPB=23;DPRA=0;EPP=52.9542;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=749;QR=0;RO=0;RPL=0;RPP=52.9542;RPPR=0;RPR=23;RUN=1;SAF=0;SAP=52.9542;SAR=23;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:6:0,6:0:0:6:192:-17.596,-1.80618,0 1/1:8:0,8:0:0:8:262:-23.9006,-2.40824,0 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 1/1:8:0,8:0:0:8:263:-23.9921,-2.40824,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1964 119 . A T 9067.36 . AB=0.342061;ABP=259.545;AC=2;AF=0.166667;AN=12;AO=406;CIGAR=1X;DP=3306;DPB=3306;DPRA=1.12059;EPP=884.628;EPPR=6300.28;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999655;PAO=0;PQA=0;PQR=0;PRO=0;QA=14103;QR=100537;RO=2900;RPL=0;RPP=884.628;RPPR=6300.28;RPR=406;RUN=1;SAF=0;SAP=884.628;SAR=406;SRF=0;SRP=6300.28;SRR=2900;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:563:562,1:562:19510:1:34:0,-166.081,-1752.14 0/0:898:898,0:898:31081:0:0:0,-270.325,-2796.53 0/0:207:207,0:207:7174:0:0:0,-62.3132,-645.754 0/0:454:454,0:454:15557:0:0:0,-136.668,-1399.93 0/1:738:430,308:430:14970:308:10736:-744.025,0,-1124.93 0/1:446:349,97:349:12245:97:3333:-165.932,0,-967.669 dDocent_Contig_1965 12 . A G 887.734 . AB=0.12812;ABP=724.94;AC=1;AF=0.0833333;AN=12;AO=177;CIGAR=2X;DP=4047;DPB=4047;DPRA=0;EPP=387.361;EPPR=8397.92;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=59.9997;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6862;QR=152497;RO=3866;RPL=0;RPP=387.361;RPPR=8397.92;RPR=177;RUN=1;SAF=177;SAP=387.361;SAR=0;SRF=3866;SRP=8397.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:558:541,16:541:21385:16:602:0,-113.576,-1868.5 0|0:719:678,41:678:26825:41:1560:0,-75.779,-2271.38 0|0:553:544,9:544:21480:9:359:0,-133.795,-1898.85 0|1:601:524,77:524:20563:77:3012:-90.2963,0,-1668.23 0|0:891:883,7:883:34787:7:270:0,-243.581,-3103.24 0|0:725:696,27:696:27457:27:1059:0,-122.44,-2373.29 dDocent_Contig_1966 46 . C T 36.0203 . AB=0.117647;ABP=46.1843;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=247;DPB=247;DPRA=1.55396;EPP=24.725;EPPR=500.424;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.966245;PAO=0;PQA=0;PQR=0;PRO=0;QA=403;QR=9450;RO=237;RPL=0;RPP=24.725;RPPR=500.424;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=237;SRP=517.649;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:30,4:30:1193:4:163:-4.82341,0,-97.4157 0/0:74:68,6:68:2743:6:240:0,-0.301682,-225.002 0/0:50:50,0:50:1966:0:0:0,-15.0515,-177.139 0/0:42:42,0:42:1667:0:0:0,-12.6433,-150.257 0/0:19:19,0:19:756:0:0:0,-5.71957,-68.361 0/0:28:28,0:28:1125:0:0:0,-8.42884,-101.534 dDocent_Contig_1967 20 . C A 286.722 . AB=0.152318;ABP=161.557;AC=3;AF=0.25;AN=12;AO=30;CIGAR=2X3M2X;DP=316;DPB=316;DPRA=0;EPP=68.1545;EPPR=615.366;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.9;PAIREDR=0.971631;PAO=0;PQA=0;PQR=0;PRO=0;QA=1125;QR=11215;RO=282;RPL=0;RPP=68.1545;RPPR=615.366;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=282;SRP=615.366;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:50:49,1:49:1949:1:38:0,-11.2542,-171.819 0|1:58:48,10:48:1926:10:375:-16.6429,0,-156.084 0|0:59:53,5:53:2091:5:186:0,-0.753469,-171.282 0|0:56:55,1:55:2175:1:37:0,-13.1598,-192.238 0|1:49:41,8:41:1635:8:301:-12.6973,0,-132.638 0|1:44:36,5:36:1439:5:188:-4.55357,0,-117.026 dDocent_Contig_1968 49 . T C 2360.31 . AB=0.161125;ABP=393.015;AC=3;AF=0.25;AN=12;AO=63;CIGAR=1X2M1X4M;DP=391;DPB=391;DPRA=0;EPP=139.813;EPPR=374.332;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.994152;PAO=0;PQA=0;PQR=0;PRO=0;QA=2485;QR=6722;RO=171;RPL=63;RPP=139.813;RPPR=374.332;RPR=0;RUN=1;SAF=63;SAP=139.813;SAR=0;SRF=171;SRP=374.332;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:62:43,6,4,7:43:1707:6,4,7:222,161,272:-9.40572,-4.1963,-142.921,-9.0759,-131.458,-148.411,0,-122.381,-127.269,-138.431 0|1:83:28,19,16,17:28:1093:19,16,17:742,636,652:-52.5698,0,-84.1259,-8.63393,-37.4812,-93.6641,-7.50652,-36.3527,-44.9871,-92.2331 0|0:71:30,9,9,23:30:1167:9,9,23:347,363,924:-67.1144,-47.6551,-140.836,-46.2213,-113.621,-139.405,0,-67.4007,-65.9677,-88.9696 0|1:64:32,15,10,5:32:1249:15,10,5:585,394,202:-38.4489,0,-98.1399,-15.6665,-70.2399,-115.314,-31.4265,-86.0006,-101.669,-132.58 0|0:60:22,13,10,15:22:873:13,10,15:491,401,581:-41.1005,-7.4922,-75.4466,-14.6792,-46.3191,-83.5409,0,-31.6401,-38.8286,-67.3549 0|1:51:16,9,14,12:16:633:9,14,12:345,530,478:-38.6139,-15.1164,-64.506,0,-23.7857,-47.883,-4.06371,-27.8517,-12.7346,-52.5534 dDocent_Contig_1970 43 . A G 339.852 . AB=0.133641;ABP=255.992;AC=2;AF=0.166667;AN=12;AO=30;CIGAR=1X;DP=638;DPB=638;DPRA=1.0254;EPP=68.1545;EPPR=1269.49;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.950577;PAO=0;PQA=0;PQR=0;PRO=0;QA=1150;QR=24039;RO=607;RPL=0;RPP=68.1545;RPPR=1269.49;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=607;SRP=1321.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:106:104,1:104:4128:1:18:0,-29.9432,-369.742 0/0:119:119,0:119:4721:0:0:0,-35.8226,-424.81 0/0:86:86,0:86:3394:0:0:0,-25.8886,-305.52 0/1:96:86,10:86:3439:10:363:-4.10127,0,-280.646 0/0:110:110,0:110:4340:0:0:0,-33.1133,-390.561 0/1:121:102,19:102:4017:19:769:-33.1052,0,-325.092 dDocent_Contig_1971 1 . N G 146.917 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=7.37776;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=159;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:159:-14.6914,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1972 56 . G A 1423.4 . AB=0.184466;ABP=359.3;AC=2;AF=0.166667;AN=12;AO=76;CIGAR=1X;DP=1118;DPB=1118;DPRA=1.16714;EPP=168.042;EPPR=2263.51;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.998079;PAO=0;PQA=0;PQR=0;PRO=0;QA=2990;QR=40984;RO=1041;RPL=76;RPP=168.042;RPPR=2263.51;RPR=0;RUN=1;SAF=76;SAP=168.042;SAR=0;SRF=1041;SRP=2263.51;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:195:195,0:195:7606:0:0:0,-58.7008,-684.19 0/0:169:168,0:168:6598:0:0:0,-50.573,-593.472 0/0:158:158,0:158:6194:0:0:0,-47.5627,-557.241 0/0:184:184,0:184:7257:0:0:0,-55.3895,-652.816 0/1:249:194,55:194:7716:55:2145:-118.268,0,-619.103 0/1:163:142,21:142:5613:21:845:-27.2948,0,-455.94 dDocent_Contig_1973 29 . C T 657.683 . AB=0.128205;ABP=49.8362;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=3M1X3M;DP=345;DPB=343.143;DPRA=0.52;EPP=13.8677;EPPR=639.252;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.993174;PAO=0;PQA=0;PQR=0;PRO=0;QA=194;QR=11496;RO=293;RPL=0;RPP=13.8677;RPPR=639.252;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=293;SRP=639.252;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:39:32,2,0,5,0:32:1263:2,0,5,0:80,0,194,0:-6.29516,-9.33454,-112.663,-15.9281,-113.266,-119.856,0,-97.3298,-103.92,-102.415,-15.9281,-113.266,-119.856,-103.92,-119.856 0|0:52:33,2,12,0,5:33:1285:2,12,0,5:63,483,0,202:-29.8884,-34.7669,-139.761,0,-100.553,-102.002,-39.8224,-140.363,-105.614,-145.425,-23.1654,-123.709,-88.9583,-128.77,-127.265 0|0:43:37,5,0,0,0:37:1444:5,0,0,0:198,0,0,0:-5.17137,0,-117.195,-16.3095,-118.7,-134.997,-16.3095,-118.7,-134.997,-134.997,-16.3095,-118.7,-134.997,-134.997,-134.997 0|0:71:68,2,1,0,0:68:2683:2,1,0,0:79,38,0,0:0,-13.9595,-234.132,-17.3585,-231.617,-237.817,-20.47,-234.734,-238.118,-241.234,-20.47,-234.734,-238.118,-241.234,-241.234 0|0:79:78,0,1,0,0:78:3074:0,1,0,0:0,41,0,0:0,-23.4803,-276.366,-19.6868,-272.982,-272.681,-23.4803,-276.366,-272.982,-276.366,-23.4803,-276.366,-272.982,-276.366,-276.366 0|0:61:45,1,14,0,0:45:1747:1,14,0,0:41,548,0,0:-31.6351,-41.7949,-185.047,0,-140.292,-139.462,-45.1814,-185.348,-143.677,-188.732,-45.1814,-185.348,-143.677,-188.732,-188.732 dDocent_Contig_1974 36 . A T 1670.38 . AB=0.171533;ABP=516.556;AC=2;AF=0.166667;AN=12;AO=100;CIGAR=2X;DP=1384;DPB=1384;DPRA=1.17953;EPP=220.158;EPPR=2786.84;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99532;PAO=0;PQA=0;PQR=0;PRO=0;QA=3951;QR=50834;RO=1282;RPL=0;RPP=220.158;RPPR=2786.84;RPR=100;RUN=1;SAF=100;SAP=220.158;SAR=0;SRF=1282;SRP=2786.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:198:198,0:198:7833:0:0:0,-59.6039,-704.578 0|0:311:311,0:311:12293:0:0:0,-93.6203,-1105.54 0|0:126:124,0:124:4952:0:0:0,-37.3277,-445.256 0|0:201:195,6:195:7716:6:231:0,-39.3551,-672.914 0|1:306:255,51:255:10135:51:2023:-90.1473,0,-819.418 0|1:242:199,43:199:7905:43:1697:-80.1129,0,-638.202 dDocent_Contig_1975 13 . A T 751.549 . AB=0.124074;ABP=665.856;AC=3;AF=0.25;AN=12;AO=70;CIGAR=1X;DP=1373;DPB=1373;DPRA=0.556154;EPP=155.013;EPPR=2830.27;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998464;PAO=0;PQA=0;PQR=0;PRO=0;QA=2790;QR=52058;RO=1302;RPL=0;RPP=155.013;RPPR=2830.27;RPR=70;RUN=1;SAF=70;SAP=155.013;SAR=0;SRF=1302;SRP=2830.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:129:118,11:118:4717:11:429:-0.123834,0,-385.607 0/1:192:171,20:171:6806:20:815:-15.986,0,-554.566 0/1:219:183,36:183:7321:36:1423:-62.3899,0,-592.605 0/0:183:180,3:180:7233:3:123:0,-43.6237,-639.132 0/0:316:316,0:316:12651:0:0:0,-95.1255,-1137.65 0/0:334:334,0:334:13330:0:0:0,-100.544,-1198.7 dDocent_Contig_1976 8 . A G 126.066 . AB=0.2;ABP=30.3709;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=241;DPB=241;DPRA=1.38614;EPP=26.8965;EPPR=502.449;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.973913;PAO=0;PQA=0;PQR=0;PRO=0;QA=422;QR=8650;RO=230;RPL=0;RPP=26.8965;RPPR=502.449;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=230;SRP=502.449;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:37,0:37:1394:0:0:0,-11.1381,-125.743 0/1:35:28,7:28:1075:7:270:-14.1295,0,-86.5202 0/0:51:49,2:49:1825:2:74:0,-8.3271,-157.474 0/0:54:52,2:52:1972:2:78:0,-8.85215,-170.317 0/0:34:34,0:34:1246:0:0:0,-10.235,-112.425 0/0:30:30,0:30:1138:0:0:0,-9.0309,-102.717 dDocent_Contig_1977 53 . A G 12552.7 . AB=0.0438799;ABP=785.468;AC=0;AF=0;AN=12;AO=19;CIGAR=1X3M1X;DP=650;DPB=650;DPRA=1.33642;EPP=44.2683;EPPR=324.388;GTI=0;LEN=1;MEANALT=2.75;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.993243;PAO=0;PQA=0;PQR=0;PRO=0;QA=698;QR=5703;RO=148;RPL=19;RPP=44.2683;RPPR=324.388;RPR=0;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=148;SRP=324.388;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:92:26,4,61:26:984:4,61:143,1961:-150.242,-146.41,-225.874,0,-69.057,-62.3499 0|0:130:43,13,74:43:1682:13,74:479,2511:-190.64,-164.41,-298.808,0,-99.145,-116.034 0|0:78:19,1,57:19:731:1,57:39,1921:-150.039,-152.552,-212.274,0,-56.9392,-42.9873 0|0:133:46,1,85:46:1784:1,85:37,2786:-211.155,-221.975,-368.253,0,-143.544,-120.983 0|0:81:1,0,79:1:28:0,79:0,2659:-236.706,-237.007,-239.225,-21.6076,-23.7814,0 0|0:136:13,0,122:13:494:0,122:0,4071:-325.709,-329.623,-370.133,0,-40.6638,-3.93813 dDocent_Contig_1978 1 . N G 660.551 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=18;CIGAR=1X;DP=18;DPB=18;DPRA=0;EPP=42.0968;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=55.6667;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=709;QR=0;RO=0;RPL=0;RPP=42.0968;RPPR=0;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:116:-10.8155,-0.90309,0 1/1:3:0,3:0:0:3:111:-10.3392,-0.90309,0 1/1:4:0,4:0:0:4:164:-15.1301,-1.20412,0 1/1:3:0,3:0:0:3:116:-10.8095,-0.90309,0 1/1:2:0,2:0:0:2:82:-7.0064,-0.60206,0 1/1:3:0,3:0:0:3:120:-11.1756,-0.90309,0 dDocent_Contig_1979 7 . T A 562.386 . AB=0.114679;ABP=846.418;AC=2;AF=0.166667;AN=12;AO=146;CIGAR=1X;DP=2103;DPB=2103;DPRA=1.11028;EPP=320.045;EPPR=4246.07;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.979452;PAIREDR=0.949335;PAO=0;PQA=0;PQR=0;PRO=0;QA=5538;QR=74069;RO=1954;RPL=0;RPP=320.045;RPPR=4246.07;RPR=146;RUN=1;SAF=146;SAP=320.045;SAR=0;SRF=1954;SRP=4246.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:297:256,41:256:9644:41:1571:-52.2529,0,-778.278 0/0:392:361,31:361:13741:31:1173:0,-12.1348,-1130.23 0/1:357:323,34:323:12281:34:1271:-7.20754,0,-997.328 0/0:296:277,18:277:10472:18:686:0,-27.0068,-880.071 0/0:321:320,0:320:12126:0:0:0,-96.3296,-1090.61 0/0:440:417,22:417:15805:22:837:0,-56.6693,-1346.09 dDocent_Contig_1980 25 . T A 1886.28 . AB=0.487805;ABP=3.16919;AC=2;AF=0.166667;AN=12;AO=60;CIGAR=6M1X3M;DP=373;DPB=383.6;DPRA=1.2551;EPP=133.299;EPPR=606.68;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2329;QR=10840;RO=278;RPL=0;RPP=133.299;RPPR=606.68;RPR=60;RUN=1;SAF=60;SAP=133.299;SAR=0;SRF=278;SRP=606.68;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:59:57,0,0,0:57:2215:0,0,0:0,0,0:0,-17.1587,-199.268,-17.1587,-199.268,-199.268,-17.1587,-199.268,-199.268,-199.268 0|0:39:39,0,0,0:39:1530:0,0,0:0,0,0:0,-11.7402,-137.96,-11.7402,-137.96,-137.96,-11.7402,-137.96,-137.96,-137.96 0|0:30:22,8,0,0:22:864:8,0,0:294,0,0:-17.7774,0,-69.0466,-24.4,-71.4548,-95.4809,-24.4,-71.4548,-95.4809,-95.4809 0|0:122:108,0,11,0:108:4212:0,11,0:0,401,0:-0.299267,-32.8105,-379.056,0,-346.304,-342.992,-32.8105,-379.056,-346.304,-379.056 0|1:48:28,0,0,20:28:1097:0,0,20:0,0,757:-53.9838,-62.4127,-152.628,-62.4127,-152.628,-152.628,0,-90.599,-90.599,-84.5784 0|1:75:24,0,11,40:24:922:0,11,40:0,397,1572:-122.087,-129.312,-204.996,-96.9229,-172.604,-169.293,0,-75.7006,-43.3124,-63.6594 dDocent_Contig_1981 1 . N G 229.563 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=243;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:161:-14.8749,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 dDocent_Contig_1982 21 . A G 1531.98 . AB=0.159696;ABP=532.106;AC=4;AF=0.333333;AN=12;AO=85;CIGAR=5M1X11M;DP=554;DPB=553.529;DPRA=12.1111;EPP=187.585;EPPR=886.8;GTI=0;LEN=1;MEANALT=5.2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3385;QR=15765;RO=407;RPL=0;RPP=187.585;RPPR=886.8;RPR=85;RUN=1;SAF=85;SAP=187.585;SAR=0;SRF=407;SRP=886.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:104:81,6,14:81:3139:6,14:242,568:-22.4656,-26.9006,-282.956,0,-237.917,-253.651 0|1:143:106,10,16:106:4069:10,16:397,635:-20.3776,-19.5972,-350.584,0,-301.322,-329.188 0|1:163:126,5,20:126:4897:5,20:199,792:-27.2995,-48.8376,-449.761,0,-386.085,-396.45 0|1:116:69,8,34:69:2686:8,34:306,1349:-90.2767,-85.9425,-304.276,0,-195.641,-210.513 0|0:9:8,0,0:8:317:0,0:0,0:0,-2.40824,-28.489,-2.40824,-28.489,-28.489 0|0:19:17,0,1:17:657:0,1:0,41:0,-5.11751,-59.0692,-1.71856,-55.6839,-55.3828 dDocent_Contig_1983 98 . N C 63806.5 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=2106;CIGAR=1X;DP=2108;DPB=2108;DPRA=0;EPP=4576.13;EPPR=0;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=70896;QR=0;RO=0;RPL=2106;RPP=4576.13;RPPR=0;RPR=0;RUN=1;SAF=2106;SAP=4576.13;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:174:0,174:0:0:174:5817:-523.686,-52.3792,0 1/1:288:0,288:0:0:288:9631:-866.829,-86.6966,0 1/1:361:0,361:0:0:361:12151:-1093.55,-108.672,0 1/1:349:0,349:0:0:349:11795:-1061.53,-105.059,0 1/1:472:0,471:0:0:471:15924:-1432.66,-141.785,0 1/1:464:0,463:0:0:463:15578:-1401.62,-139.377,0 dDocent_Contig_1984 53 . C A 408.481 . AB=0.153509;ABP=240.767;AC=4;AF=0.333333;AN=12;AO=41;CIGAR=1X;DP=324;DPB=324;DPRA=2.11429;EPP=92.0407;EPPR=617.537;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.756098;PAIREDR=0.639576;PAO=0;PQA=0;PQR=0;PRO=0;QA=1472;QR=10379;RO=283;RPL=15;RPP=9.41879;RPPR=3.07936;RPR=26;RUN=1;SAF=15;SAP=9.41879;SAR=26;SRF=140;SRP=3.07936;SRR=143;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:68:62,6:62:2217:6:204:0,-1.78045,-181.064 0/1:69:62,7:62:2328:7:263:-3.2566,0,-188.954 0/0:28:28,0:28:1033:0:0:0,-8.42884,-93.2709 0/1:59:48,11:48:1769:11:400:-18.5814,0,-141.7 0/1:68:54,14:54:1951:14:493:-24.2233,0,-155.349 0/1:32:29,3:29:1081:3:112:-0.812944,0,-87.9522 dDocent_Contig_1985 120 . C T 159.569 . AB=0.177215;ABP=74.504;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=359;DPB=359;DPRA=2.15029;EPP=37.7539;EPPR=745.654;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=59.9561;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.976608;PAO=0;PQA=0;PQR=0;PRO=0;QA=525;QR=11574;RO=342;RPL=0;RPP=37.7539;RPPR=745.654;RPR=16;RUN=1;SAF=0;SAP=37.7539;SAR=16;SRF=0;SRP=745.654;SRR=342;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:78:78,0:78:2632:0:0:0,-23.4803,-237.131 0/0:38:38,0:38:1301:0:0:0,-11.4391,-117.39 0/0:107:104,2:104:3565:2:70:0,-25.4251,-314.521 0/0:30:30,0:30:1020:0:0:0,-9.0309,-92.1074 0/0:27:27,0:27:901:0:0:0,-8.12781,-81.3977 0/1:79:65,14:65:2155:14:455:-17.4798,0,-170.432 dDocent_Contig_1986 30 . G A 773.141 . AB=0.230263;ABP=99.0694;AC=2;AF=0.166667;AN=12;AO=35;CIGAR=1X;DP=488;DPB=488;DPRA=0.904762;EPP=79.0118;EPPR=986.687;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.914286;PAIREDR=0.94702;PAO=0;PQA=0;PQR=0;PRO=0;QA=1396;QR=17728;RO=453;RPL=0;RPP=79.0118;RPPR=986.687;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=453;SRP=986.687;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:69:69,0:69:2746:0:0:0,-20.7711,-247.265 0/0:93:93,0:93:3607:0:0:0,-27.9958,-324.662 0/0:86:86,0:86:3371:0:0:0,-25.8886,-303.451 0/0:88:88,0:88:3443:0:0:0,-26.4906,-309.923 0/1:71:49,22:49:1886:22:870:-57.2324,0,-148.573 0/1:81:68,13:68:2675:13:526:-23.3036,0,-216.495 dDocent_Contig_1987 60 . A T 2466.13 . AB=0.158896;ABP=1065.17;AC=2;AF=0.166667;AN=12;AO=167;CIGAR=1X;DP=2606;DPB=2606;DPRA=1.35177;EPP=365.646;EPPR=5297.06;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6289;QR=90288;RO=2438;RPL=167;RPP=365.646;RPPR=5297.06;RPR=0;RUN=1;SAF=167;SAP=365.646;SAR=0;SRF=2438;SRP=5297.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:329:329,0:329:12122:0:0:0,-99.0389,-1090.53 0/0:442:442,0:442:16078:0:0:0,-133.055,-1446.44 0/0:398:398,0:398:14848:0:0:0,-119.81,-1335.67 0/0:386:386,0:386:14245:0:0:0,-116.198,-1281.43 0/1:596:517,78:517:19386:78:2914:-82.9555,0,-1564.29 0/1:455:366,89:366:13609:89:3375:-166.88,0,-1087.27 dDocent_Contig_1988 11 . G T 8643.93 . AB=0.345946;ABP=193.689;AC=6;AF=0.5;AN=12;AO=320;CIGAR=3X;DP=925;DPB=925;DPRA=0;EPP=697.881;EPPR=1295.04;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.996875;PAIREDR=0.988235;PAO=0;PQA=0;PQR=0;PRO=0;QA=12790;QR=23310;RO=595;RPL=0;RPP=697.881;RPPR=1295.04;RPR=320;RUN=1;SAF=320;SAP=697.881;SAR=0;SRF=595;SRP=1295.04;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:130:71,59,0:71:2762:59,0:2348,0:-172.346,0,-209.595,-193.719,-227.356,-420.682 0|1:137:87,49,0:87:3423:49,0:1977,0:-136.768,0,-266.797,-162.958,-281.548,-444.516 0|1:120:53,59,8:53:2079:59,8:2369,314:-179.254,0,-153.199,-169.39,-145.139,-337.937 0|1:168:66,102,0:66:2627:102,0:4061,0:-314.908,0,-186.002,-334.776,-216.707,-551.086 0|1:244:211,32,0:211:8245:32,0:1273,0:-41.3666,0,-668.216,-104.884,-677.849,-782.659 0|1:126:107,19,0:107:4174:19,0:762,0:-30.9715,0,-337.739,-63.1817,-343.459,-406.241 dDocent_Contig_1989 27 . A T 25495.3 . AB=0.748954;ABP=260.334;AC=9;AF=0.75;AN=12;AO=802;CIGAR=1X;DP=944;DPB=944;DPRA=0;EPP=1744.53;EPPR=307.016;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.985037;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=30794;QR=5553;RO=140;RPL=0;RPP=1744.53;RPPR=307.016;RPR=802;RUN=1;SAF=802;SAP=1744.53;SAR=0;SRF=140;SRP=307.016;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:193:8,184:8:313:184:7054:-606.145,-29.645,0 1/1:175:8,167:8:322:167:6428:-549.022,-23.3315,0 1/1:98:4,93:4:160:93:3548:-304.69,-14.5764,0 0/1:135:18,117:18:697:117:4476:-362.224,0,-22.4141 0/1:202:67,135:67:2667:135:5223:-409.212,0,-179.359 0/1:141:35,106:35:1394:106:4065:-323.462,0,-83.2738 dDocent_Contig_1990 98 . N T 106.896 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=2X;DP=5;DPB=27;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=27;PQA=459;PQR=0;PRO=0;QA=113;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:2:0,2:0:0:2:56:-5.07104,-0.60206,0 1|1:1:0,1:0:0:1:16:-1.43985,-0.30103,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:41:-3.69491,-0.60206,0 .:.:.:.:.:.:.:. dDocent_Contig_1991 22 . T C 167.666 . AB=0.106195;ABP=307.439;AC=2;AF=0.166667;AN=12;AO=44;CIGAR=1X;DP=867;DPB=867;DPRA=0.863208;EPP=98.5551;EPPR=1785.79;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.98173;PAO=0;PQA=0;PQR=0;PRO=0;QA=1754;QR=32943;RO=821;RPL=0;RPP=98.5551;RPPR=1785.79;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=821;SRP=1785.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:169:161,8:161:6426:8:324:0,-21.3458,-548.535 0/0:154:142,12:142:5671:12:471:0,-3.62158,-467.455 0/1:97:88,8:88:3554:8:328:-0.582005,0,-290.57 0/1:129:113,16:113:4514:16:631:-18.2867,0,-367.326 0/0:156:156,0:156:6298:0:0:0,-46.9607,-566.535 0/0:162:161,0:161:6480:0:0:0,-48.4658,-582.814 dDocent_Contig_1992 45 . C T 4513.69 . AB=0.14087;ABP=2500.06;AC=2;AF=0.166667;AN=12;AO=315;CIGAR=1X;DP=5544;DPB=5544;DPRA=1.07952;EPP=687.024;EPPR=11344.6;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999809;PAO=0;PQA=0;PQR=0;PRO=0;QA=12548;QR=208664;RO=5227;RPL=0;RPP=687.024;RPPR=11344.6;RPR=315;RUN=1;SAF=315;SAP=687.024;SAR=0;SRF=5227;SRP=11353.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:764:762,0:762:30432:0:0:0,-229.385,-2736.03 0/0:1012:1012,0:1012:40456:0:0:0,-304.642,-3637.14 0/0:649:648,1:648:25870:1:36:0,-191.77,-2322.34 0/0:890:890,0:890:35546:0:0:0,-267.917,-3195.8 0/1:1180:969,211:969:38690:211:8433:-403.275,0,-3123.22 0/1:1049:946,103:946:37670:103:4079:-51.3161,0,-3071.02 dDocent_Contig_1993 25 . G A 75.5858 . AB=0.103448;ABP=161.453;AC=1;AF=0.0833333;AN=12;AO=23;CIGAR=1X;DP=463;DPB=463;DPRA=2.28916;EPP=52.9542;EPPR=958.458;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997727;PAO=0;PQA=0;PQR=0;PRO=0;QA=921;QR=17387;RO=440;RPL=0;RPP=52.9542;RPPR=958.458;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=440;SRP=958.458;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:63:62,1:62:2425:1:41:0,-14.8703,-214.307 0/0:132:124,8:124:4942:8:318:0,-10.7486,-415.675 0/1:116:104,12:104:4116:12:485:-9.08146,0,-335.5 0/0:69:67,2:67:2656:2:77:0,-13.4619,-231.849 0/0:31:31,0:31:1242:0:0:0,-9.33193,-112.05 0/0:52:52,0:52:2006:0:0:0,-15.6536,-180.733 dDocent_Contig_1994 1 . N G 161.56 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=161;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:40:-3.99568,-0.30103,0 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 1/1:1:0,1:0:0:1:40:-3.99568,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_1995 18 . C T 16443.9 . AB=0.738602;ABP=165.699;AC=8;AF=0.666667;AN=12;AO=556;CIGAR=1X3M2X;DP=645;DPB=645;DPRA=0;EPP=1210.35;EPPR=185.414;GTI=0;LEN=1;MEANALT=1.83333;MQM=45.777;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998201;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=22091;QR=3337;RO=84;RPL=0;RPP=1210.35;RPPR=185.414;RPR=556;RUN=1;SAF=556;SAP=1210.35;SAR=0;SRF=84;SRP=185.414;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:63:27,36:27:1078:36:1419:-99.8854,0,-78.3476 0|1:80:24,56:24:939:56:2221:-162.78,0,-60.7323 0|1:100:10,88:10:404:88:3543:-211.774,0,-7.0085 0|1:86:23,63:23:916:63:2496:-196.36,0,-56.8613 1|1:142:0,142:0:0:142:5598:-500.335,-42.7463,0 1|1:174:0,171:0:0:171:6814:-480.475,-51.4761,0 dDocent_Contig_1996 60 . T A 85866.6 . AB=0.873626;ABP=444.368;AC=11;AF=0.916667;AN=12;AO=2518;CIGAR=1X;DP=2628;DPB=2628;DPRA=0;EPP=5470.78;EPPR=239.701;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=99232;QR=4323;RO=109;RPL=2518;RPP=5470.78;RPPR=239.701;RPR=0;RUN=1;SAF=2518;SAP=5470.78;SAR=0;SRF=109;SRP=239.701;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:364:46,318:46:1825:318:12468:-1011.75,0,-54.8905 1/1:503:29,473:29:1153:473:18640:-1572.1,-47.4651,0 1/1:333:14,319:14:554:319:12599:-1082.85,-50.0424,0 1/1:411:18,393:18:731:393:15575:-1334.48,-57.6093,0 1/1:497:2,495:2:60:495:19468:-1744.94,-143.917,0 1/1:520:0,520:0:0:520:20482:-1841.76,-156.536,0 dDocent_Contig_1997 98 . N T 4439.48 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=152;CIGAR=1X;DP=153;DPB=153;DPRA=0;EPP=333.074;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=57.1184;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.993421;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4966;QR=0;RO=0;RPL=152;RPP=333.074;RPPR=0;RPR=0;RUN=1;SAF=152;SAP=333.074;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:30:0,30:0:0:30:978:-88.1303,-9.0309,0 1/1:28:0,28:0:0:28:915:-82.3873,-8.42884,0 1/1:16:0,15:0:0:15:499:-44.808,-4.51545,0 1/1:17:0,17:0:0:17:539:-48.3225,-5.11751,0 1/1:32:0,32:0:0:32:1051:-93.9532,-9.63296,0 1/1:30:0,30:0:0:30:984:-85.5016,-9.0309,0 dDocent_Contig_1998 7 . T A 4572.56 . AB=0.282235;ABP=290.516;AC=3;AF=0.25;AN=12;AO=216;CIGAR=1X;DP=1254;DPB=1254;DPRA=0;EPP=472.048;EPPR=2252.66;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8191;QR=39595;RO=1036;RPL=0;RPP=472.048;RPPR=2252.66;RPR=216;RUN=1;SAF=216;SAP=472.048;SAR=0;SRF=1036;SRP=2252.66;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:172:169,2:169:6434:2:78:0,-44.3959,-571.606 0/0:202:193,9:193:7373:9:342:0,-29.6707,-632.28 0/1:181:164,17:164:6318:17:639:-3.35679,0,-514.048 0/0:182:174,8:174:6600:8:306:0,-26.8864,-566.004 0/1:259:172,86:172:6552:86:3280:-217.518,0,-511.765 0/1:258:164,94:164:6318:94:3546:-241.6,0,-490.868 dDocent_Contig_2001 107 . N C 46.859 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=46;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:41:-3.81976,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:5:-0.499906,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_2002 7 . T A 161.482 . AB=0.096124;ABP=916.85;AC=1;AF=0.0833333;AN=12;AO=105;CIGAR=1X;DP=4131;DPB=4131;DPRA=0.857096;EPP=231.015;EPPR=8727.99;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999004;PAO=0;PQA=0;PQR=0;PRO=0;QA=3984;QR=153384;RO=4018;RPL=0;RPP=231.015;RPPR=8727.99;RPR=105;RUN=1;SAF=105;SAP=231.015;SAR=0;SRF=4018;SRP=8727.99;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:645:582,62:582:22111:62:2349:-17.37,0,-1794.54 0/0:649:623,23:623:23818:23:870:0,-116.108,-2063.67 0/0:556:535,19:535:20329:19:726:0,-101.431,-1762.89 0/0:602:602,0:602:23050:0:0:0,-181.22,-2073.21 0/0:920:918,0:918:35151:0:0:0,-276.346,-3161.2 0/0:759:758,1:758:28925:1:39:0,-224.585,-2597.67 dDocent_Contig_2003 18 . A G 1346.1 . AB=0.384615;ABP=18.0436;AC=1;AF=0.0833333;AN=12;AO=52;CIGAR=1X2M1X;DP=1372;DPB=1372;DPRA=1.11818;EPP=115.927;EPPR=2858.5;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2021;QR=51619;RO=1315;RPL=0;RPP=115.927;RPPR=2858.5;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=1315;SRP=2858.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:315:314,0:314:12349:0:0:0,-94.5234,-1110.27 0|0:362:360,2:360:14143:2:76:0,-101.758,-1264.74 0|0:216:214,0:214:8351:0:0:0,-64.4204,-750.862 0|0:269:267,0:267:10507:0:0:0,-80.375,-944.772 0|0:80:80,0:80:3132:0:0:0,-24.0824,-281.987 0|1:130:80,50:80:3137:50:1945:-136.133,0,-243.308 dDocent_Contig_2004 28 . T C 103632 . AB=0.72193;ABP=1953.8;AC=6;AF=0.5;AN=12;AO=3292;CIGAR=1X;DP=4560;DPB=4560;DPRA=0;EPP=7151.5;EPPR=2743.41;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=130639;QR=49732;RO=1262;RPL=0;RPP=7151.5;RPPR=2743.41;RPR=3292;RUN=1;SAF=3292;SAP=7151.5;SAR=0;SRF=1262;SRP=2743.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:638:119,517:119:4670:517:20434:-1645.55,0,-228.399 0/1:849:132,716:132:5185:716:28494:-2306.55,0,-211.184 0/1:674:166,506:166:6521:506:20129:-1607.28,0,-384.024 0/1:733:216,516:216:8542:516:20400:-1613.58,0,-547.594 0/1:883:331,552:331:13027:552:21977:-1710.27,0,-905.77 0/1:783:298,485:298:11787:485:19205:-1491.18,0,-824.394 dDocent_Contig_2005 40 . C T 76.9052 . AB=0.0874233;ABP=966.998;AC=1;AF=0.0833333;AN=12;AO=86;CIGAR=1X;DP=2629;DPB=2629;DPRA=1.36208;EPP=189.757;EPPR=5520.72;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=59.9969;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3432;QR=100437;RO=2541;RPL=0;RPP=189.757;RPPR=5520.72;RPR=86;RUN=1;SAF=86;SAP=189.757;SAR=0;SRF=2541;SRP=5520.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:339:337,1:337:13241:1:41:0,-98.0482,-1186.67 0/0:458:458,0:458:18095:0:0:0,-137.872,-1627.16 0/0:327:327,0:327:12879:0:0:0,-98.4368,-1158.21 0/0:328:328,0:328:13013:0:0:0,-98.7378,-1170.25 0/1:652:594,57:594:23581:57:2279:-9.2134,0,-1924.24 0/0:525:497,28:497:19628:28:1112:0,-57.6763,-1664.6 dDocent_Contig_2007 7 . C T 24424.8 . AB=0.8;ABP=636.212;AC=8;AF=0.666666;AN=12;AO=786;CIGAR=1X4M;DP=964;DPB=964;DPRA=0;EPP=1709.79;EPPR=322.217;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.997455;PAIREDR=0.993197;PAO=0;PQA=0;PQR=0;PRO=0;QA=30026;QR=5677;RO=147;RPL=0;RPP=1709.79;RPPR=322.217;RPR=786;RUN=1;SAF=786;SAP=1709.79;SAR=0;SRF=147;SRP=322.217;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:109:25,1,83:25:961:1,83:39,3152:-250.934,-255.254,-333.848,0,-75.6823,-53.9029 0|1:246:32,0,212:32:1243:0,212:0,8097:-654.763,-664.396,-766.538,0,-102.21,-38.3915 0|1:175:44,0,130:44:1698:0,130:0,4969:-394.75,-407.996,-547.445,0,-139.727,-100.593 0|1:123:25,2,95:25:968:2,95:78,3612:-288.721,-289.835,-368.755,0,-73.1302,-50.9445 1|1:157:11,18,128:11:419:18,128:691,4898:-420.982,-367.572,-396.522,-22.3556,0,-18.1914 1|1:154:10,5,138:10:388:5,138:192,5298:-441.557,-428.806,-459.181,-9.63123,-25.7746,0 dDocent_Contig_2008 95 . T A 568.905 . AB=0.583333;ABP=3.73412;AC=7;AF=0.583333;AN=12;AO=15;CIGAR=3X1M2X;DP=34;DPB=130.5;DPRA=1.625;EPP=35.5824;EPPR=0;GTI=0;LEN=1;MEANALT=2.75;MQM=60;MQMR=0;NS=6;NUMALT=2;ODDS=0;PAIRED=0.466667;PAIREDR=0;PAO=104;PQA=3519;PQR=1772;PRO=246;QA=544;QR=0;RO=0;RPL=15;RPP=35.5824;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=35.5824;SAR=15;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:2:0,2,0:0:0:2,0:78,0:-7.00958,-0.60206,0,-7.00958,-0.60206,-7.00958 1|1:9:0,0,5:0:0:0,5:0,183:-16.4702,-16.4702,-16.4702,-1.50515,-1.50515,0 0|0:6:0,0,0:0:0:0,0:0,0:0,0,0,0,0,0 0|1:12:0,1,7:0:0:1,7:39,253:-23.8685,-20.661,-20.3599,-3.20769,0,-1.10048 1|1:3:0,0,2:0:0:0,2:0,73:-6.57909,-6.57909,-6.57909,-0.60206,-0.60206,0 1|1:2:0,0,1:0:0:0,1:0,35:-3.15097,-3.15097,-3.15097,-0.30103,-0.30103,0 dDocent_Contig_2010 21 . T C 78238.2 . AB=0.890909;ABP=806.021;AC=10;AF=0.833333;AN=12;AO=2295;CIGAR=1X;DP=2437;DPB=2437;DPRA=0;EPP=4986.54;EPPR=311.359;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.99695;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=92173;QR=5732;RO=142;RPL=0;RPP=4986.54;RPPR=311.359;RPR=2295;RUN=1;SAF=2295;SAP=4986.54;SAR=0;SRF=142;SRP=311.359;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:385:28,357:28:1139:357:14247:-1178.32,-13.1095,0 1/1:432:18,414:18:734:414:16559:-1422.53,-63.6619,0 0/1:241:24,217:24:970:217:8745:-713.932,0,-15.045 0/1:364:42,322:42:1679:322:12949:-1054.82,0,-41.7545 1/1:557:27,530:27:1087:530:21296:-1816.6,-69.5578,0 1/1:458:3,455:3:123:455:18377:-1640.83,-126.407,0 dDocent_Contig_2011 45 . T G 77528 . AB=0.882614;ABP=1151.22;AC=10;AF=0.833333;AN=12;AO=2308;CIGAR=2X;DP=2445;DPB=2445;DPRA=0;EPP=5006.09;EPPR=291.816;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999133;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=90381;QR=5293;RO=133;RPL=1;RPP=5006.09;RPPR=291.816;RPR=2307;RUN=1;SAF=2308;SAP=5014.77;SAR=0;SRF=133;SRP=291.816;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:312:0,311:0:0:311:12171:-1094.23,-93.6203,0 1|1:491:0,489:0:0:489:19142:-1721.08,-147.204,0 1|1:285:5,280:5:202:280:11017:-972.295,-67.2315,0 0|1:471:68,402:68:2725:402:15713:-1271.29,0,-103.572 1|1:454:23,431:23:896:431:16806:-1430.39,-55.7183,0 0|1:432:37,395:37:1470:395:15532:-1266.71,0,-2.50722 dDocent_Contig_2012 107 . N C 111.623 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=5;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=111;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,1:0:0:1:25:-2.33987,-0.30103,0 1/1:1:0,1:0:0:1:30:-2.99957,-0.30103,0 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:4:0,2:0:0:2:49:-4.49726,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_2013 14 . C A 6544.01 . AB=0.355263;ABP=99.8123;AC=5;AF=0.416667;AN=12;AO=189;CIGAR=1X1M3D1X1M1X;DP=532;DPB=440.125;DPRA=0;EPP=413.419;EPPR=378.675;GTI=0;LEN=1;MEANALT=3.33333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.976879;PAO=0;PQA=0;PQR=0;PRO=0;QA=7458;QR=6861;RO=173;RPL=0;RPP=413.419;RPPR=378.675;RPR=189;RUN=1;SAF=189;SAP=413.419;SAR=0;SRF=173;SRP=378.675;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:100:27,51,9,13:27:1056:51,9,13:1987,362,527:-155.158,0,-71.4565,-133.451,-56.9749,-217.558,-119.824,-43.347,-176.806,-202.727 1|0:81:14,23,21,21:14:562:23,21,21:912,828,849:-94.5388,-23.6887,-63.0745,-30.6399,-1.88592,-70.6275,-28.7551,0,-6.95147,-68.7437 1|0:67:9,24,6,26:9:360:24,6,26:949,221,1055:-132.741,-57.3591,-79.7896,-117.386,-68.9515,-145.235,-48.4395,0,-60.0329,-70.2698 1|0:87:15,45,9,18:15:599:45,9,18:1786,366,723:-152.745,-10.2401,-46.0281,-127.07,-29.3834,-173.696,-97.685,0,-116.83,-141.602 0|0:88:51,14,5,18:51:2024:14,5,18:565,201,721:-44.0425,-12.8181,-175.215,-42.8308,-162.865,-207.936,0,-120.032,-150.045,-161.191 0|1:109:57,32,6,14:57:2260:32,6,14:1259,235,564:-86.3962,0,-176.39,-84.2321,-166.7,-268.451,-57.0683,-139.538,-223.772,-238.881 dDocent_Contig_2016 27 . C A 5425.43 . AB=0.451691;ABP=11.4025;AC=4;AF=0.333333;AN=12;AO=208;CIGAR=1X3M;DP=763;DPB=763;DPRA=0;EPP=454.677;EPPR=1175.61;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8285;QR=21222;RO=540;RPL=0;RPP=454.677;RPPR=1175.61;RPR=208;RUN=1;SAF=208;SAP=454.677;SAR=0;SRF=540;SRP=1175.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:141:36,11,94:36:1395:11,94:437,3746:-297.631,-272.494,-383.762,0,-78.5984,-86.2786 0|1:88:35,0,51:35:1379:0,51:0,2021:-155.876,-166.412,-279.859,0,-113.512,-98.1596 0|1:68:49,0,18:49:1918:0,18:0,736:-46.031,-60.7814,-218.455,0,-157.715,-152.296 0|1:117:93,0,24:93:3667:0,24:0,946:-50.2263,-78.2221,-379.914,0,-302.086,-294.861 0|0:170:159,0,11:159:6274:0,11:0,440:0,-47.8638,-564.058,-11.2216,-527.815,-524.503 0|0:179:168,0,10:168:6589:0,10:0,396:0,-50.573,-592.387,-17.9941,-559.795,-556.785 dDocent_Contig_2017 23 . T C 7082.34 . AB=0.509363;ABP=3.21362;AC=8;AF=0.666667;AN=12;AO=221;CIGAR=1X;DP=353;DPB=353;DPRA=0;EPP=482.906;EPPR=289.645;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.963801;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8872;QR=5345;RO=132;RPL=0;RPP=482.906;RPPR=289.645;RPR=221;RUN=1;SAF=221;SAP=482.906;SAR=0;SRF=132;SRP=289.645;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:55:31,24:31:1234:24:960:-70.139,0,-94.7665 0/1:74:33,41:33:1347:41:1646:-126.086,0,-99.2059 0/1:66:35,31:35:1430:31:1263:-94.0651,0,-109.074 0/1:72:32,40:32:1293:40:1602:-122.736,0,-94.9534 1/1:33:0,33:0:0:33:1323:-119.329,-9.93399,0 1/1:53:1,52:1:41:52:2078:-183.1,-11.86,0 dDocent_Contig_2018 8 . G A 26489.7 . AB=0.846847;ABP=118.998;AC=11;AF=0.916667;AN=12;AO=810;CIGAR=1X;DP=855;DPB=855;DPRA=0;EPP=1761.9;EPPR=96.3836;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=30827;QR=1645;RO=43;RPL=0;RPP=1761.9;RPPR=96.3836;RPR=810;RUN=1;SAF=810;SAP=1761.9;SAR=0;SRF=43;SRP=96.3836;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:131:8,123:8:311:123:4680:-392.896,-11.0806,0 1/1:129:6,123:6:232:123:4700:-401.797,-17.5839,0 0/1:111:17,94:17:651:94:3579:-288.818,0,-25.5108 1/1:172:11,159:11:412:159:6068:-508.653,-14.0519,0 1/1:184:0,184:0:0:184:6962:-626.476,-55.3895,0 1/1:128:1,127:1:39:127:4838:-431.557,-34.6353,0 dDocent_Contig_2020 109 . A G 4343.9 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=8;CIGAR=1X1M1X4M;DP=216;DPB=570;DPRA=1.5;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=5.75;MQM=40;MQMR=0;NS=6;NUMALT=5;ODDS=0;PAIRED=1;PAIREDR=0;PAO=119.75;PQA=823.5;PQR=2735.17;PRO=193.083;QA=75;QR=0;RO=0;RPL=0;RPP=20.3821;RPPR=0;RPR=8;RUN=1;SAF=0;SAP=20.3821;SAR=8;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:37:0,1,1,0,31,0:0:0:1,1,0,31,0:17,8,0,862,0:-74.6079,-73.389,-73.0879,-74.1998,-72.9814,-73.8987,-74.6079,-73.389,-74.1998,-74.6079,-9.33193,-8.36261,-9.18886,-9.33193,0,-74.6079,-73.389,-74.1998,-74.6079,-9.33193,-74.6079 0|0:51:0,2,3,0,41,3:0:0:2,3,0,41,3:31,28,0,1180,21:-103.153,-100.978,-100.376,-101.556,-99.3824,-100.653,-103.153,-100.978,-101.556,-103.153,-12.3422,-10.2983,-10.9824,-12.3422,0,-102.187,-100.013,-100.593,-102.187,-11.6196,-101.284 0|0:20:0,1,0,1,17,1:0:0:1,0,1,17,1:15,0,7,416,7:-35.8627,-34.8316,-34.5306,-35.8627,-34.8316,-35.8627,-35.5542,-34.5249,-35.5542,-35.2532,-5.11751,-4.30078,-5.11751,-5.03572,0,-35.5542,-34.5249,-35.5542,-35.2477,-5.03572,-35.2532 0|0:37:0,1,1,2,32,0:0:0:1,1,2,32,0:21,7,14,938,0:-81.1953,-79.6186,-79.3176,-80.8777,-79.3015,-80.5767,-80.5607,-78.9851,-80.2444,-79.9586,-9.63296,-8.31542,-9.59862,-9.71153,0,-81.1953,-79.6186,-80.8777,-80.5607,-9.63296,-81.1953 0|0:34:0,2,0,0,30,0:0:0:2,0,0,30,0:27,0,0,765,0:-65.8056,-63.999,-63.3969,-65.8056,-63.999,-65.8056,-65.8056,-63.999,-65.8056,-65.8056,-9.0309,-8.26088,-9.0309,-9.0309,0,-65.8056,-63.999,-65.8056,-65.8056,-9.0309,-65.8056 0|0:37:0,2,3,0,30,1:0:0:2,3,0,30,1:36,32,0,839,7:-72.9878,-70.3712,-69.7691,-71.0438,-68.4303,-70.1407,-72.9878,-70.3712,-71.0438,-72.9878,-9.0309,-6.63809,-7.4988,-9.0309,0,-72.6698,-70.0542,-70.7275,-72.6698,-8.82102,-72.3688 dDocent_Contig_2021 1 . N G 118.72 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=15.25;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=308;QR=0;RO=0;RPL=0;RPP=20.3821;RPPR=0;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:154:-4.61935,-1.20412,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:116:-5.85715,-0.90309,0 1/1:1:0,1:0:0:1:38:-0.899522,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_2022 209 . N G 127.512 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=7.37776;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=138;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:138:-12.7509,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_2023 21 . C A 1020.59 . AB=0.11101;ABP=1447.41;AC=1;AF=0.0833333;AN=12;AO=166;CIGAR=1X;DP=5573;DPB=5573;DPRA=0.751235;EPP=363.475;EPPR=11742;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.945616;PAO=0;PQA=0;PQR=0;PRO=0;QA=6600;QR=217211;RO=5406;RPL=0;RPP=363.475;RPPR=11742;RPR=166;RUN=1;SAF=166;SAP=363.475;SAR=0;SRF=5406;SRP=11742;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:837:819,18:819:32739:18:731:0,-185.849,-2877.31 0/1:1099:977,122:977:39289:122:4828:-103.582,0,-3201.32 0/0:605:584,20:584:23504:20:795:0,-110.363,-2041.33 0/0:805:799,6:799:32081:6:246:0,-219.809,-2861.71 0/0:894:894,0:894:35896:0:0:0,-269.121,-3227.17 0/0:1333:1333,0:1333:53702:0:0:0,-401.273,-4827.75 dDocent_Contig_2024 96 . C T 8744.61 . AB=0.419175;ABP=53.908;AC=6;AF=0.5;AN=12;AO=376;CIGAR=1X;DP=897;DPB=897;DPRA=0;EPP=819.484;EPPR=1134.35;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.994681;PAIREDR=0.998081;PAO=0;PQA=0;PQR=0;PRO=0;QA=12823;QR=17952;RO=521;RPL=376;RPP=819.484;RPPR=1134.35;RPR=0;RUN=1;SAF=376;SAP=819.484;SAR=0;SRF=521;SRP=1134.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:137:87,50:87:3006:50:1698:-111.864,0,-229.545 0/1:175:95,80:95:3293:80:2730:-193.273,0,-243.925 0/1:114:82,32:82:2831:32:1083:-63.4571,0,-220.723 0/1:141:91,50:91:3145:50:1725:-113.093,0,-240.845 0/1:197:117,80:117:4006:80:2758:-189.171,0,-301.45 0/1:133:49,84:49:1671:84:2829:-214.824,0,-110.638 dDocent_Contig_2025 44 . G A 1888.32 . AB=0.100791;ABP=2804.74;AC=1;AF=0.0833333;AN=12;AO=341;CIGAR=3M1X1M;DP=5657;DPB=5545.4;DPRA=0;EPP=743.482;EPPR=11077.5;GTI=0;LEN=1;MEANALT=5.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.999608;PAO=0;PQA=0;PQR=0;PRO=0;QA=13565;QR=199945;RO=5104;RPL=0;RPP=743.482;RPPR=11077.5;RPR=341;RUN=1;SAF=341;SAP=743.482;SAR=0;SRF=5104;SRP=11086.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:851:773,0,73:773:30229:0,73:0,2908:-6.80884,-239.505,-2724.73,0,-2485.28,-2463.31 0|0:1052:1040,0,7:1040:40692:0,7:0,283:0,-313.071,-3658.71,-289.687,-3635.37,-3633.27 0|0:557:538,0,14:538:21109:0,14:0,545:0,-161.954,-1897.96,-117.094,-1853.17,-1848.96 0|0:903:864,0,37:864:33745:0,37:0,1465:0,-260.09,-3034.1,-139.358,-2913.53,-2902.4 0|0:1173:896,144,131:896:35123:144,131:5542,5210:-185.245,0,-2844.87,-26.0379,-2459.3,-2874.84 0|0:1121:993,42,79:993:39047:42,79:1609,3154:0,-166.897,-3366.03,-39.1641,-3118.93,-3227.18 dDocent_Contig_2026 98 . N A 303.287 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=10;CIGAR=1X;DP=10;DPB=10;DPRA=0;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=312;QR=0;RO=0;RPL=10;RPP=24.725;RPPR=0;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:44:-4.17896,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:139:-12.8527,-1.20412,0 1/1:2:0,2:0:0:2:60:-5.69915,-0.60206,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_2027 29 . G T 334.314 . AB=0.135747;ABP=257.701;AC=3;AF=0.25;AN=12;AO=53;CIGAR=1X;DP=611;DPB=611;DPRA=0;EPP=118.098;EPPR=1214.69;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2096;QR=22238;RO=558;RPL=0;RPP=118.098;RPPR=1214.69;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=558;SRP=1214.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:127:117,10:117:4688:10:409:0,-1.06024,-384.659 0/0:134:128,6:128:5115:6:244:0,-17.9992,-437.875 0/1:119:105,14:105:4176:14:526:-11.8445,0,-339.992 0/0:129:122,7:122:4834:7:286:0,-12.7181,-408.854 0/1:24:18,6:18:729:6:243:-15.0235,0,-58.7104 0/1:78:68,10:68:2696:10:388:-11.7851,0,-219.276 dDocent_Contig_2028 25 . C G 1988.53 . AB=0.318548;ABP=73.9334;AC=6;AF=0.5;AN=12;AO=79;CIGAR=1X;DP=248;DPB=248;DPRA=0;EPP=174.557;EPPR=365.646;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.949367;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3139;QR=6657;RO=167;RPL=0;RPP=174.557;RPPR=365.646;RPR=79;RUN=1;SAF=79;SAP=174.557;SAR=0;SRF=167;SRP=365.646;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:29,11:29:1158:11:428:-26.6458,0,-92.2907 0/1:65:51,14:51:2036:14:552:-30.4524,0,-163.869 0/1:35:22,13:22:888:13:502:-34.9871,0,-69.6888 0/1:53:21,32:21:842:32:1292:-100.59,0,-60.1396 0/1:28:22,5:22:863:5:202:-10.167,0,-69.5977 0/1:26:22,4:22:870:4:163:-7.23165,0,-70.7804 dDocent_Contig_2029 11 . T C 10059.6 . AB=0.635108;ABP=83.3976;AC=6;AF=0.5;AN=12;AO=322;CIGAR=2X3M1X5M;DP=507;DPB=507;DPRA=0;EPP=702.224;EPPR=246.215;GTI=0;LEN=1;MEANALT=5.33333;MQM=59.9006;MQMR=60;NS=6;NUMALT=4;ODDS=5.55112e-17;PAIRED=0.987578;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=12770;QR=4406;RO=112;RPL=0;RPP=702.224;RPPR=246.215;RPR=322;RUN=1;SAF=322;SAP=702.224;SAR=0;SRF=112;SRP=246.215;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:59:13,6,4,1,33:13:509:6,4,1,33:235,161,40,1306:-103.569,-88.2299,-128.275,-94.2123,-116.812,-134.86,-104.187,-126.786,-132.769,-145.738,0,-22.5991,-28.5803,-38.556,-31.9174 0|1:97:9,6,5,0,76:9:354:6,5,0,76:244,192,0,3019:-245.71,-228.292,-255.604,-232.661,-241.653,-260.275,-248.419,-257.411,-261.78,-277.538,0,-8.98821,-13.3647,-29.1213,-6.24304 0|1:50:12,6,0,0,29:12:480:6,0,0,29:243,0,0,1154:-91.4028,-74.9768,-112.712,-95.0152,-114.518,-134.556,-95.0152,-114.518,-134.556,-134.556,0,-19.5011,-39.5401,-39.5401,-30.8102 0|1:70:11,3,2,0,48:11:432:3,2,0,48:121,79,0,1902:-153.247,-146.584,-181.211,-150.057,-175.613,-184.986,-156.558,-182.114,-185.588,-192.089,0,-25.5573,-29.0322,-35.5338,-21.0843 0|1:107:26,0,0,13,64:26:1027:0,0,13,64:0,0,498,2522:-199.531,-207.357,-291.867,-207.357,-291.867,-291.867,-166.497,-251.006,-251.006,-247.093,0,-84.5183,-84.5183,-43.6584,-65.2524 0|1:124:41,0,0,8,72:41:1604:0,0,8,72:0,0,318,2867:-223.726,-236.068,-367.942,-236.068,-367.942,-367.942,-209.886,-341.76,-341.76,-339.352,0,-131.872,-131.872,-105.689,-110.197 dDocent_Contig_2030 112 . G C 40.4955 . AB=0.153846;ABP=30.0702;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=141;DPB=141;DPRA=1.13043;EPP=11.6962;EPPR=275.015;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.846715;PAO=0;PQA=0;PQR=0;PRO=0;QA=145;QR=5214;RO=137;RPL=4;RPP=11.6962;RPPR=275.015;RPR=0;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=300.502;SRR=137;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:564:0:0:0,-4.51545,-51.0943 0/0:35:35,0:35:1299:0:0:0,-10.536,-117.174 0/0:24:24,0:24:920:0:0:0,-7.22472,-83.0999 0/0:14:14,0:14:516:0:0:0,-4.21442,-46.7778 0/0:27:27,0:27:1050:0:0:0,-8.12781,-94.7935 0/1:26:22,4:22:865:4:145:-5.57239,0,-70.3387 dDocent_Contig_2031 1 . N G 157.675 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=163;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_2032 30 . T C 95714.4 . AB=0.910039;ABP=1123.12;AC=10;AF=0.833333;AN=12;AO=2755;CIGAR=1X;DP=2855;DPB=2855;DPRA=0;EPP=5985.42;EPPR=217.986;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.997822;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=110254;QR=3941;RO=99;RPL=0;RPP=5985.42;RPPR=217.986;RPR=2755;RUN=1;SAF=2755;SAP=5985.42;SAR=0;SRF=99;SRP=217.986;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:373:15,358:15:557:358:14303:-1235.7,-61.8295,0 1/1:514:16,498:16:648:498:19859:-1726.97,-96.0762,0 0/1:215:22,193:22:882:193:7732:-630.736,0,-14.9649 0/1:552:46,505:46:1854:505:20206:-1650.58,0,-0.826408 1/1:640:0,640:0:0:640:25629:-2304.25,-192.659,0 1/1:561:0,561:0:0:561:22525:-2025.25,-168.878,0 dDocent_Contig_2033 11 . C A 52746.5 . AB=0.633965;ABP=422.49;AC=6;AF=0.5;AN=12;AO=1706;CIGAR=1X;DP=2691;DPB=2691;DPRA=0;EPP=3707.54;EPPR=2018.14;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.995311;PAIREDR=0.99569;PAO=0;PQA=0;PQR=0;PRO=0;QA=67617;QR=37018;RO=928;RPL=0;RPP=3707.54;RPPR=2018.14;RPR=1706;RUN=1;SAF=1706;SAP=3707.54;SAR=0;SRF=928;SRP=2018.14;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:449:87,356:87:3484:356:14099:-1134.13,0,-179.849 0/1:490:171,302:171:6830:302:11936:-930.674,0,-471.61 0/1:255:80,167:80:3187:167:6688:-526.872,0,-212.155 0/1:431:95,330:95:3746:330:13075:-1047.5,0,-208.831 0/1:496:222,263:222:8880:263:10394:-788.44,0,-652.263 0/1:570:273,288:273:10891:288:11425:-858.257,0,-810.184 dDocent_Contig_2034 46 . G A 5798.68 . AB=0.168301;ABP=1854.11;AC=3;AF=0.25;AN=12;AO=434;CIGAR=1X;DP=3849;DPB=3849;DPRA=0;EPP=936.763;EPPR=7351.4;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=1;PAIREDR=0.999707;PAO=0;PQA=0;PQR=0;PRO=0;QA=17251;QR=133834;RO=3412;RPL=1;RPP=936.763;RPPR=7351.4;RPR=433;RUN=1;SAF=434;SAP=945.429;SAR=0;SRF=3412;SRP=7412.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:575:479,94:479:18801:94:3731:-163.109,0,-1517.93 0/1:711:593,118:593:23329:118:4717:-210.405,0,-1883.66 0/0:631:584,47:584:22891:47:1867:0,-21.7141,-1890.09 0/1:651:537,114:537:21130:114:4529:-211.576,0,-1704.01 0/0:612:605,6:605:23677:6:232:0,-163.092,-2107.76 0/0:669:614,55:614:24006:55:2175:0,-5.45966,-1962.69 dDocent_Contig_2035 12 . G A 135.583 . AB=0.172043;ABP=89.8925;AC=1;AF=0.0833333;AN=12;AO=31;CIGAR=1X1M1X2M2X;DP=559;DPB=559;DPRA=0.776256;EPP=70.3259;EPPR=1134.35;GTI=0;LEN=1;MEANALT=1;MQM=30.3226;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1195;QR=20523;RO=521;RPL=0;RPP=70.3259;RPPR=1134.35;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=521;SRP=1134.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:93:77,16:77:3018:16:621:-14.7802,0,-243.749 0|0:96:92,4:92:3607:4:153:0,-17.7291,-313.535 0|0:74:67,7:67:2645:7:267:0,-3.49209,-219.418 0|0:77:73,4:73:2877:4:154:0,-11.9735,-247.853 0|0:107:106,0:106:4199:0:0:0,-31.9092,-377.505 0|0:112:106,0:106:4177:0:0:0,-31.9092,-375.546 dDocent_Contig_2036 20 . A G 33.8224 . AB=0.102941;ABP=96.1281;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=1X;DP=217;DPB=217;DPRA=0.912752;EPP=18.2106;EPPR=459.02;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.714286;PAIREDR=0.733333;PAO=0;PQA=0;PQR=0;PRO=0;QA=285;QR=8228;RO=210;RPL=0;RPP=18.2106;RPPR=459.02;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=210;SRP=459.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:20,2:20:777:2:81:-1.06307,0,-63.6248 0/0:44:44,0:44:1750:0:0:0,-13.2453,-157.723 0/0:44:44,0:44:1657:0:0:0,-13.2453,-149.399 0/0:38:38,0:38:1505:0:0:0,-11.4391,-135.693 0/0:23:23,0:23:909:0:0:0,-6.92369,-82.1123 0/1:46:41,5:41:1630:5:204:-4.89665,0,-133.084 dDocent_Contig_2037 72 . T C 30476.6 . AB=0.653701;ABP=330.093;AC=6;AF=0.5;AN=12;AO=1042;CIGAR=1X;DP=1594;DPB=1594;DPRA=0;EPP=2265.68;EPPR=1199.49;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998081;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=39324;QR=20407;RO=551;RPL=1042;RPP=2265.68;RPPR=1199.49;RPR=0;RUN=1;SAF=1042;SAP=2265.68;SAR=0;SRF=551;SRP=1199.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:189:66,123:66:2437:123:4598:-356.994,0,-162.658 0/1:353:161,192:161:5881:192:7243:-545.488,0,-423.041 0/1:169:66,102:66:2468:102:3896:-300.023,0,-171.672 0/1:191:58,133:58:2173:133:5139:-404.942,0,-138.302 0/1:461:104,357:104:3824:357:13273:-1055.28,0,-205.514 0/1:231:96,135:96:3624:135:5175:-396.152,0,-256.732 dDocent_Contig_2038 46 . T C 125.4 . AB=0.0977918;ABP=448.436;AC=2;AF=0.166667;AN=12;AO=38;CIGAR=1X;DP=602;DPB=602;DPRA=2.25405;EPP=85.5263;EPPR=1227.72;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.989362;PAO=0;PQA=0;PQR=0;PRO=0;QA=1503;QR=22382;RO=564;RPL=0;RPP=85.5263;RPPR=1227.72;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=564;SRP=1227.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:167:152,15:152:6034:15:599:-3.97466,0,-492.582 0/0:100:93,7:93:3669:7:275:0,-4.98551,-305.125 0/0:55:55,0:55:2152:0:0:0,-16.5566,-193.858 0/1:150:134,16:134:5368:16:629:-11.7864,0,-437.803 0/0:41:41,0:41:1651:0:0:0,-12.3422,-148.819 0/0:89:89,0:89:3508:0:0:0,-26.7917,-315.776 dDocent_Contig_2039 43 . C T 280.44 . AB=0.212121;ABP=50.5195;AC=3;AF=0.25;AN=12;AO=15;CIGAR=1X;DP=120;DPB=120;DPRA=1;EPP=35.5824;EPPR=231.015;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.266667;PAIREDR=0.580952;PAO=0;PQA=0;PQR=0;PRO=0;QA=605;QR=4216;RO=105;RPL=0;RPP=35.5824;RPPR=231.015;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=105;SRP=231.015;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:11:10,1:10:400:1:41:-0.783237,0,-33.0482 0/1:37:32,5:32:1272:5:200:-7.24092,0,-103.61 0/1:18:10,8:10:407:8:323:-24.02,0,-31.5715 0/0:14:13,1:13:526:1:41:0,-0.119853,-43.5922 0/0:21:21,0:21:850:0:0:0,-6.32163,-76.8116 0/0:19:19,0:19:761:0:0:0,-5.71957,-68.8039 dDocent_Contig_2040 9 . T C 189.434 . AB=0.208333;ABP=38.4777;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=221;DPB=221;DPRA=1.536;EPP=31.2394;EPPR=454.677;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.923077;PAIREDR=0.913462;PAO=0;PQA=0;PQR=0;PRO=0;QA=501;QR=7998;RO=208;RPL=0;RPP=31.2394;RPPR=454.677;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=208;SRP=454.677;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1081:0:0:0,-8.42884,-97.5955 0/0:40:40,0:40:1546:0:0:0,-12.0412,-139.41 0/0:25:25,0:25:957:0:0:0,-7.52575,-86.4436 0/0:32:32,0:32:1233:0:0:0,-9.63296,-111.262 0/0:48:45,3:45:1728:3:117:0,-3.53906,-144.869 0/1:48:38,10:38:1453:10:384:-20.4663,0,-116.597 dDocent_Contig_2041 57 . T C 60269.6 . AB=0.448748;ABP=109.628;AC=6;AF=0.5;AN=12;AO=2097;CIGAR=1X;DP=4673;DPB=4673;DPRA=0;EPP=4556.59;EPPR=5581.52;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=82770;QR=94819;RO=2569;RPL=2097;RPP=4556.59;RPPR=5581.52;RPR=0;RUN=1;SAF=2097;SAP=4556.59;SAR=0;SRF=2569;SRP=5581.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:638:342,296:342:12623:296:11645:-855.251,0,-943.536 0/1:699:330,368:330:12131:368:14506:-1094.29,0,-881.162 0/1:607:355,251:355:13039:251:9961:-713.355,0,-990.479 0/1:578:280,297:280:10382:297:11734:-881.486,0,-760.253 0/1:1227:740,486:740:27313:486:19162:-1353.84,0,-2087.5 0/1:924:522,399:522:19331:399:15762:-1139.95,0,-1461.39 dDocent_Contig_2042 61 . T A 184.913 . AB=0.153846;ABP=97.7199;AC=1;AF=0.0833333;AN=12;AO=24;CIGAR=1X;DP=1071;DPB=1071;DPRA=0.924202;EPP=55.1256;EPPR=2276.54;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.583333;PAIREDR=0.12894;PAO=0;PQA=0;PQR=0;PRO=0;QA=876;QR=40771;RO=1047;RPL=15;RPP=6.26751;RPPR=1367.12;RPR=9;RUN=1;SAF=15;SAP=6.26751;SAR=9;SRF=929;SRP=1367.12;SRR=118;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:207:207,0:207:8076:0:0:0,-62.3132,-726.474 0/0:293:292,1:292:11345:1:39:0,-84.3052,-1016.49 0/0:169:169,0:169:6665:0:0:0,-50.8741,-599.596 0/0:184:183,1:183:7149:1:7:0,-54.6895,-642.42 0/0:127:119,8:119:4606:8:307:0,-10.2422,-386.514 0/1:91:77,14:77:2930:14:523:-20.0142,0,-236.444 dDocent_Contig_2043 40 . C A 331.276 . AB=0.238806;ABP=42.7126;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=180;DPB=180;DPRA=1.18584;EPP=37.7539;EPPR=359.132;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.625;PAIREDR=0.804878;PAO=0;PQA=0;PQR=0;PRO=0;QA=620;QR=6486;RO=164;RPL=0;RPP=37.7539;RPPR=359.132;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=164;SRP=359.132;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:675:0:0:0,-5.11751,-61.0799 0/0:34:34,0:34:1347:0:0:0,-10.235,-121.493 0/0:22:22,0:22:844:0:0:0,-6.62266,-76.2562 0/0:40:40,0:40:1579:0:0:0,-12.0412,-142.347 0/1:46:33,13:33:1314:13:504:-31.8541,0,-104.676 0/1:21:18,3:18:727:3:116:-4.49515,0,-59.4331 dDocent_Contig_2044 17 . A T 43.6786 . AB=0.116279;ABP=58.0041;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=260;DPB=260;DPRA=1.24138;EPP=24.725;EPPR=545.878;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.7;PAIREDR=0.564;PAO=0;PQA=0;PQR=0;PRO=0;QA=410;QR=10048;RO=250;RPL=0;RPP=24.725;RPPR=545.878;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=250;SRP=545.878;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:34,0:34:1356:0:0:0,-10.235,-122.3 0/0:58:55,3:55:2226:3:123:0,-5.99495,-189.036 0/0:43:41,2:41:1651:2:82:0,-5.16461,-141.035 0/1:43:38,5:38:1514:5:205:-5.89072,0,-123.561 0/0:38:38,0:38:1522:0:0:0,-11.4391,-137.221 0/0:44:44,0:44:1779:0:0:0,-13.2453,-160.319 dDocent_Contig_2045 98 . N G 118.456 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,2:0:0:2:55:-5.0856,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 dDocent_Contig_2048 31 . T C 17430.8 . AB=0.487644;ABP=4.62012;AC=6;AF=0.5;AN=12;AO=592;CIGAR=1X;DP=1214;DPB=1214;DPRA=0;EPP=1288.52;EPPR=1349.32;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.97973;PAIREDR=0.996774;PAO=0;PQA=0;PQR=0;PRO=0;QA=23552;QR=24666;RO=620;RPL=0;RPP=1288.52;RPPR=1349.32;RPR=592;RUN=1;SAF=592;SAP=1288.52;SAR=0;SRF=620;SRP=1349.32;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:133:97,36:97:3832:36:1420:-88.0259,0,-304.842 0/1:327:166,161:166:6596:161:6416:-478.731,0,-494.908 0/1:244:99,145:99:3918:145:5755:-444.325,0,-279.164 0/1:170:66,103:66:2672:103:4148:-321.993,0,-189.307 0/1:196:110,85:110:4384:85:3321:-240.157,0,-335.713 0/1:144:82,62:82:3264:62:2492:-181.067,0,-250.468 dDocent_Contig_2049 107 . N T 172.96 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=175;QR=0;RO=0;RPL=0;RPP=18.2106;RPPR=0;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:12:-1.19999,-0.30103,0 1/1:2:0,2:0:0:2:42:-3.9887,-0.60206,0 1/1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 1/1:3:0,3:0:0:3:90:-8.3974,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_2050 1 . N G 77.8076 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_2051 11 . G A 6638.67 . AB=0.305104;ABP=287.408;AC=6;AF=0.5;AN=12;AO=263;CIGAR=1X;DP=862;DPB=862;DPRA=0;EPP=574.108;EPPR=1301.55;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.980989;PAIREDR=0.974916;PAO=0;PQA=0;PQR=0;PRO=0;QA=10370;QR=23528;RO=598;RPL=0;RPP=574.108;RPPR=1301.55;RPR=263;RUN=1;SAF=263;SAP=574.108;SAR=0;SRF=598;SRP=1301.55;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:120:85,35:85:3385:35:1367:-87.1734,0,-268.569 0/1:140:98,41:98:3817:41:1618:-103.625,0,-301.317 0/1:103:84,19:84:3290:19:767:-38.3425,0,-265.169 0/1:132:89,43:89:3529:43:1707:-114.125,0,-277.911 0/1:198:129,69:129:5078:69:2713:-184.696,0,-397.305 0/1:169:113,56:113:4429:56:2198:-147.127,0,-347.687 dDocent_Contig_2052 76 . G A 6025.15 . AB=0.18372;ABP=1913.67;AC=5;AF=0.416667;AN=12;AO=437;CIGAR=1X;DP=2651;DPB=2651;DPRA=0;EPP=951.944;EPPR=4799.79;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.999547;PAO=0;PQA=0;PQR=0;PRO=0;QA=15247;QR=76323;RO=2209;RPL=437;RPP=951.944;RPPR=4799.79;RPR=0;RUN=1;SAF=437;SAP=951.944;SAR=0;SRF=2209;SRP=4799.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:369:303,66:303:10449:66:2291:-95.3717,0,-829.296 0/0:452:419,33:419:14415:33:1115:0,-35.4201,-1196.52 0/1:295:255,40:255:8789:40:1392:-36.7695,0,-702.221 0/1:405:359,43:359:12415:43:1514:-15.3605,0,-996.051 0/1:477:400,76:400:13944:76:2690:-98.7072,0,-1111.14 0/1:653:473,179:473:16311:179:6245:-365.528,0,-1271.1 dDocent_Contig_2053 11 . C T 1762.55 . AB=0.459337;ABP=12.5465;AC=2;AF=0.166667;AN=12;AO=305;CIGAR=1X;DP=1142;DPB=1142;DPRA=2.77824;EPP=665.309;EPPR=1811.86;GTI=0;LEN=1;MEANALT=1;MQM=13.9049;MQMR=59.9438;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.988053;PAO=0;PQA=0;PQR=0;PRO=0;QA=10717;QR=33638;RO=837;RPL=0;RPP=665.309;RPPR=1820.53;RPR=305;RUN=1;SAF=0;SAP=665.309;SAR=305;SRF=836;SRP=1811.86;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:103:103,0:103:4166:0:0:0,-31.0061,-374.884 0/0:153:153,0:153:6151:0:0:0,-46.0576,-553.338 0/0:84:84,0:84:3352:0:0:0,-25.2865,-301.723 0/0:138:138,0:138:5545:0:0:0,-41.5421,-498.842 0/1:390:179,211:179:7190:211:7376:-143.465,0,-527.338 0/1:274:180,94:180:7234:94:3341:-36.0115,0,-568.207 dDocent_Contig_2054 17 . C T 1564.89 . AB=0.158249;ABP=605.598;AC=1;AF=0.0833333;AN=12;AO=199;CIGAR=1X;DP=4317;DPB=4317;DPRA=0.695643;EPP=435.133;EPPR=8945.13;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.999514;PAO=0;PQA=0;PQR=0;PRO=0;QA=7893;QR=165329;RO=4118;RPL=0;RPP=435.133;RPPR=8945.13;RPR=199;RUN=1;SAF=199;SAP=435.133;SAR=0;SRF=4118;SRP=8945.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:594:500,94:500:20020:94:3739:-157.711,0,-1621.27 0/0:824:770,54:770:30914:54:2142:0,-55.0903,-2586.37 0/0:540:505,35:505:20237:35:1375:0,-38.5482,-1695.56 0/0:636:621,15:621:24913:15:596:0,-137.477,-2185.91 0/0:964:964,0:964:38868:0:0:0,-290.193,-3494.29 0/0:759:758,1:758:30377:1:41:0,-224.387,-2726.97 dDocent_Contig_2055 101 . N T 2108 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=66;CIGAR=4X;DP=66;DPB=66;DPRA=0;EPP=146.327;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2332;QR=0;RO=0;RPL=66;RPP=146.327;RPPR=0;RPR=0;RUN=1;SAF=66;SAP=146.327;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:51:0,51:0:0:51:1794:-161.743,-15.3525,0 1|1:15:0,15:0:0:15:538:-48.7558,-4.51545,0 dDocent_Contig_2056 14 . G A 13455.2 . AB=0.0601266;ABP=534.086;AC=0;AF=0;AN=12;AO=19;CIGAR=3M1X3M2I2M1X1M2X;DP=524;DPB=391.846;DPRA=0.724771;EPP=44.2683;EPPR=146.327;GTI=0;LEN=1;MEANALT=2.75;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=722;QR=2589;RO=66;RPL=0;RPP=44.2683;RPPR=146.327;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=66;SRP=146.327;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:84:15,5,63:15:586:5,63:199,2346:-187.485,-175.613,-222.286,0,-31.7867,-29.2098 0|0:94:20,4,70:20:793:4,70:149,2622:-208.709,-202.534,-266.609,0,-53.1033,-44.2227 0|0:63:10,1,51:10:389:1,51:40,1952:-157.162,-156.877,-188.545,0,-28.6664,-16.6099 0|0:75:11,9,54:11:424:9,54:334,2054:-165.152,-141.139,-173.244,0,-7.49948,-18.563 0|0:109:1,0,108:1:41:0,108:0,4102:-365.179,-365.48,-368.864,-28.7177,-32.5112,0 0|0:99:9,0,90:9:356:0,90:0,3341:-271.039,-273.748,-303.047,0,-29.6925,-2.59983 dDocent_Contig_2057 16 . C A 44934.1 . AB=0.0714286;ABP=293.367;AC=0;AF=0;AN=12;AO=13;CIGAR=2X4M;DP=1616;DPB=1616;DPRA=0.840647;EPP=31.2394;EPPR=448.162;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=523;QR=8086;RO=205;RPL=0;RPP=31.2394;RPPR=448.162;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=205;SRP=448.162;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:294:49,10,0,233:49:1935:10,0,233:392,0,9223:-744.221,-726.736,-882.95,-758.972,-885.96,-918.196,0,-126.992,-159.227,-89.087 0|0:386:49,2,0,334:49:1936:2,0,334:62,0,13376:-1087.2,-1096.97,-1255.68,-1101.95,-1256.28,-1261.26,0,-154.386,-159.359,-58.8154 0|0:182:25,4,13,140:25:987:4,13,140:163,523,5604:-454.095,-448.173,-528.18,-418.519,-486.282,-495.816,0,-67.7576,-38.1024,-39.0617 0|0:321:74,19,0,228:74:2916:19,0,228:755,0,9148:-731.437,-691.557,-925.73,-753.713,-931.45,-993.606,0,-177.735,-239.892,-171.257 0|0:197:0,0,0,196:0:0:0,0,196:0,0,7806:-701.756,-701.756,-701.756,-701.756,-701.756,-701.756,-59.0019,-59.0019,-59.0019,0 0|0:236:8,0,0,228:8:312:0,0,228:0,0,9010:-781.93,-784.338,-809.983,-784.338,-809.983,-809.983,-42.5998,-68.6348,-68.6348,0 dDocent_Contig_2058 16 . A T 1912.63 . AB=0.189723;ABP=426.13;AC=2;AF=0.166667;AN=12;AO=112;CIGAR=1X;DP=1407;DPB=1407;DPRA=1.47612;EPP=246.215;EPPR=2815.07;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993822;PAO=0;PQA=0;PQR=0;PRO=0;QA=4492;QR=51725;RO=1295;RPL=0;RPP=246.215;RPPR=2815.07;RPR=112;RUN=1;SAF=112;SAP=246.215;SAR=0;SRF=1295;SRP=2815.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:230:230,0:230:9212:0:0:0,-69.2369,-828.52 0/0:254:252,2:252:10073:2:72:0,-69.6264,-899.082 0/0:126:126,0:126:5025:0:0:0,-37.9298,-452.125 0/0:291:277,14:277:11020:14:571:0,-35.8678,-939.345 0/1:244:194,50:194:7787:50:2000:-106.739,0,-626.963 0/1:262:216,46:216:8608:46:1849:-87.7457,0,-695.36 dDocent_Contig_2059 34 . C G 403.557 . AB=0.123077;ABP=404.065;AC=3;AF=0.25;AN=12;AO=47;CIGAR=1X;DP=793;DPB=793;DPRA=0.731366;EPP=105.07;EPPR=1620.76;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.87234;PAIREDR=0.973154;PAO=0;PQA=0;PQR=0;PRO=0;QA=1861;QR=29802;RO=745;RPL=0;RPP=105.07;RPPR=1620.76;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=745;SRP=1620.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:130:115,15:115:4600:15:599:-15.1156,0,-374.787 0/0:146:139,7:139:5538:7:279:0,-18.4701,-472.767 0/1:81:73,8:73:2937:8:323:-5.05465,0,-240.033 0/1:114:97,17:97:3864:17:660:-25.4072,0,-313.431 0/0:147:147,0:147:5914:0:0:0,-44.2514,-532.03 0/0:175:174,0:174:6949:0:0:0,-52.3792,-624.681 dDocent_Contig_2061 184 . C T 99.745 . AB=0.4;ABP=3.87889;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=430;DPB=430;DPRA=0.119048;EPP=11.6962;EPPR=928.058;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=157;QR=16816;RO=426;RPL=4;RPP=11.6962;RPPR=928.058;RPR=0;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=928.058;SRR=426;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:119:119,0:119:4663:0:0:0,-35.8226,-419.592 0/0:134:134,0:134:5328:0:0:0,-40.338,-479.369 0/0:76:76,0:76:3029:0:0:0,-22.8783,-272.692 0/0:23:23,0:23:917:0:0:0,-6.92369,-82.836 0/0:68:68,0:68:2638:0:0:0,-20.47,-237.553 0/1:10:6,4:6:241:4:157:-11.4974,0,-19.0566 dDocent_Contig_2062 151 . A C 10230.2 . AB=0.450687;ABP=19.9294;AC=6;AF=0.5;AN=12;AO=361;CIGAR=1X4M;DP=801;DPB=801.2;DPRA=0;EPP=662.037;EPPR=917.2;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=14114;QR=16453;RO=421;RPL=15;RPP=662.037;RPPR=917.2;RPR=346;RUN=1;SAF=0;SAP=786.912;SAR=361;SRF=0;SRP=917.2;SRR=421;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:56:25,0,30:25:1007:0,30:0,1139:-85.8119,-93.3376,-176.347,0,-82.9928,-73.9619 0|1:138:75,1,59:75:2930:1,59:40,2276:-164.285,-183.567,-424.12,0,-237.554,-223.089 0|1:228:109,13,106:109:4284:13,106:514,4159:-309.193,-299.705,-648.135,0,-310.041,-320.432 0|1:114:65,1,48:65:2551:1,48:40,1891:-135.978,-152.25,-361.734,0,-206.483,-195.329 0|1:147:82,0,65:82:3157:0,65:0,2563:-186.564,-211.249,-470.412,0,-259.553,-239.986 0|1:118:65,0,53:65:2524:0,53:0,2086:-152.413,-171.98,-379.345,0,-207.755,-191.801 dDocent_Contig_2063 98 . N T 2520 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=81;CIGAR=1X;DP=81;DPB=81;DPRA=0;EPP=178.9;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2779;QR=0;RO=0;RPL=81;RPP=178.9;RPPR=0;RPR=0;RUN=1;SAF=81;SAP=178.9;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:22:0,22:0:0:22:760:-68.7203,-6.62266,0 ./.:.:.:.:.:.:.:. 1/1:28:0,28:0:0:28:967:-87.3432,-8.42884,0 1/1:28:0,28:0:0:28:947:-85.5379,-8.42884,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:105:-9.79616,-0.90309,0 dDocent_Contig_2064 55 . T G 20451 . AB=0.299484;ABP=1086.32;AC=5;AF=0.416667;AN=12;AO=978;CIGAR=1X2M1X2M1X;DP=3892;DPB=3892;DPRA=0;EPP=2126.71;EPPR=6248.16;GTI=0;LEN=1;MEANALT=6.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998978;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=34867;QR=107952;RO=2876;RPL=978;RPP=2126.71;RPPR=6248.16;RPR=0;RUN=1;SAF=978;SAP=2126.71;SAR=0;SRF=2876;SRP=6248.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:500:360,139:360:13204:139:4851:-286.181,0,-1037.42 0|1:695:468,220:468:17305:220:7726:-487.989,0,-1349.43 0|1:526:328,193:328:12495:193:7031:-475.613,0,-966.868 0|1:661:374,281:374:14099:281:10143:-715.209,0,-1070.82 0|0:790:729,49:729:27508:49:1738:0,-77.8577,-2317.59 0|1:720:617,96:617:23341:96:3378:-89.3334,0,-1884.59 dDocent_Contig_2068 98 . N T 1843.84 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=65;CIGAR=1X;DP=65;DPB=65;DPRA=0;EPP=144.156;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=58.8154;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2030;QR=0;RO=0;RPL=65;RPP=144.156;RPPR=0;RPR=0;RUN=1;SAF=65;SAP=144.156;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:7:0,7:0:0:7:218:-19.9263,-2.10721,0 1/1:26:0,26:0:0:26:810:-73.1882,-7.82678,0 1/1:5:0,5:0:0:5:163:-14.9916,-1.50515,0 1/1:12:0,12:0:0:12:373:-32.9282,-3.61236,0 1/1:13:0,13:0:0:13:398:-36.114,-3.91339,0 1/1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 dDocent_Contig_2071 40 . T C 14913.9 . AB=0.629085;ABP=91.5865;AC=7;AF=0.583333;AN=12;AO=471;CIGAR=1X;DP=698;DPB=698;DPRA=0;EPP=1025.77;EPPR=493.763;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.983015;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=18714;QR=8428;RO=226;RPL=0;RPP=1025.77;RPPR=493.763;RPR=471;RUN=1;SAF=471;SAP=1025.77;SAR=0;SRF=226;SRP=493.763;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:101:48,53:48:1787:53:2125:-161.025,0,-130.677 0/1:158:64,93:64:2379:93:3714:-286.82,0,-166.853 0/1:79:22,57:22:840:57:2275:-181.134,0,-52.1363 0/1:136:72,64:72:2679:64:2537:-187.522,0,-200.363 1/1:86:0,86:0:0:86:3389:-305.064,-25.8886,0 0/1:138:20,118:20:743:118:4674:-379.05,0,-25.6501 dDocent_Contig_2072 98 . N A 114.712 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=111;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:46:-4.36917,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_2073 8 . T A 13063.1 . AB=0.712025;ABP=249.789;AC=6;AF=0.5;AN=12;AO=450;CIGAR=1X;DP=632;DPB=632;DPRA=0;EPP=980.173;EPPR=398.218;GTI=0;LEN=1;MEANALT=1;MQM=51.1333;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.785714;PAO=0;PQA=0;PQR=0;PRO=0;QA=17134;QR=6981;RO=182;RPL=0;RPP=980.173;RPPR=398.218;RPR=450;RUN=1;SAF=450;SAP=980.173;SAR=0;SRF=182;SRP=398.218;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:90:27,63:27:1022:63:2395:-184.709,0,-65.1925 0/1:71:37,34:37:1407:34:1297:-93.5702,0,-105.538 0/1:91:29,62:29:1124:62:2396:-179.979,0,-74.0682 0/1:64:38,26:38:1478:26:961:-67.1632,0,-114.028 0/1:176:27,149:27:1042:149:5690:-440.098,0,-41.1056 0/1:140:24,116:24:908:116:4395:-352.008,0,-39.8912 dDocent_Contig_2074 20 . A G 185.531 . AB=0.125926;ABP=167.093;AC=1;AF=0.0833333;AN=12;AO=26;CIGAR=1X;DP=656;DPB=656;DPRA=0.935103;EPP=59.4686;EPPR=1371.04;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.985714;PAO=0;PQA=0;PQR=0;PRO=0;QA=1033;QR=25248;RO=630;RPL=0;RPP=59.4686;RPPR=1371.04;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=630;SRP=1371.04;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:85:85,0:85:3402:0:0:0,-25.5875,-306.222 0/0:146:146,0:146:5849:0:0:0,-43.9504,-526.184 0/0:79:76,3:76:3018:3:117:0,-12.8717,-260.793 0/0:108:108,0:108:4331:0:0:0,-32.5112,-389.73 0/1:135:118,17:118:4750:17:671:-20.076,0,-386.76 0/0:103:97,6:97:3898:6:245:0,-8.57662,-328.383 dDocent_Contig_2075 14 . A T 43903.8 . AB=0.833333;ABP=1056.9;AC=8;AF=0.666667;AN=12;AO=1329;CIGAR=1X;DP=1526;DPB=1526;DPRA=0;EPP=2888.9;EPPR=430.79;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=53132;QR=7770;RO=197;RPL=0;RPP=2888.9;RPPR=430.79;RPR=1329;RUN=1;SAF=1329;SAP=2888.9;SAR=0;SRF=197;SRP=430.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:216:55,161:55:2194:161:6384:-509.279,0,-132.606 0/1:279:39,240:39:1539:240:9530:-773.128,0,-54.7642 1/1:180:15,165:15:578:165:6581:-539.652,-1.83491,0 0/1:239:45,194:45:1757:194:7778:-627.65,0,-86.4049 1/1:254:0,254:0:0:254:10217:-918.835,-76.4616,0 0/1:358:43,315:43:1702:315:12642:-1029.06,0,-45.6331 dDocent_Contig_2076 31 . A G 456.43 . AB=0.143498;ABP=249.185;AC=1;AF=0.0833333;AN=12;AO=32;CIGAR=1X;DP=1924;DPB=1924;DPRA=0.655497;EPP=72.4974;EPPR=4111.44;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.985729;PAO=0;PQA=0;PQR=0;PRO=0;QA=1267;QR=74961;RO=1892;RPL=0;RPP=72.4974;RPPR=4111.44;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=1892;SRP=4111.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:454:454,0:454:17845:0:0:0,-136.668,-1604.67 0/0:447:447,0:447:17757:0:0:0,-134.56,-1596.71 0/0:234:234,0:234:9297:0:0:0,-70.441,-836.178 0/0:398:398,0:398:15726:0:0:0,-119.81,-1414.17 0/0:168:168,0:168:6721:0:0:0,-50.573,-604.59 0/1:223:191,32:191:7615:32:1267:-47.1659,0,-617.857 dDocent_Contig_2077 15 . T A 5594.64 . AB=0.0750351;ABP=2239.88;AC=1;AF=0.0833333;AN=12;AO=107;CIGAR=5M1X2M1X1M2X4M;DP=1426;DPB=1424.62;DPRA=0;EPP=210.031;EPPR=424.32;GTI=0;LEN=1;MEANALT=29.3333;MQM=46.1776;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=0.00934579;PAIREDR=0.353535;PAO=0;PQA=0;PQR=0;PRO=0;QA=4047;QR=7718;RO=198;RPL=0;RPP=235.358;RPPR=432.962;RPR=107;RUN=1;SAF=104;SAP=210.031;SAR=3;SRF=197;SRP=424.32;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:200:42,4,37,37,0,9,13,2,5,10:42:1628:4,37,37,0,9,13,2,5,10:136,1296,1130,0,346,505,80,177,381:-88.539,-91.0051,-223.56,0,-123.588,-122.627,-18.8574,-142.442,-51.4438,-141.48,-101.182,-224.765,-133.765,-152.618,-234.941,-73.6369,-197.221,-106.221,-125.074,-207.398,-204.688,-61.5581,-185.143,-94.1422,-112.996,-195.32,-167.776,-191.406,-94.678,-218.261,-127.261,-146.114,-228.438,-200.894,-188.816,-227.835,-87.3687,-210.952,-119.952,-138.805,-221.128,-193.585,-181.507,-214.625,-219.623,-70.2954,-193.879,-102.879,-121.733,-204.056,-176.512,-164.434,-197.552,-190.243,-201.046 0|0:316:34,11,27,56,11,10,15,17,22,17:34:1325:11,27,56,11,10,15,17,22,17:391,903,1634,431,387,561,678,809,641:-107.835,-88.3125,-193.913,-48.8258,-127.981,-149.61,0,-79.155,-39.6697,-92.0539,-83.4716,-162.626,-123.14,-74.3138,-189.072,-87.2671,-166.422,-126.935,-78.1093,-161.581,-193.169,-75.4561,-154.611,-115.125,-66.2988,-149.77,-153.566,-179.853,-62.2314,-141.387,-101.9,-53.0739,-136.546,-140.341,-128.53,-166.026,-53.6399,-132.795,-93.3087,-44.483,-127.954,-131.75,-119.939,-106.714,-155.93,-67.7502,-146.905,-107.419,-58.593,-142.064,-145.86,-134.049,-120.825,-112.233,-171.545 0|0:192:40,5,17,49,0,5,5,3,5,5:40:1543:5,17,49,0,5,5,3,5,5:165,613,1429,0,191,198,118,186,191:-91.7142,-91.7225,-216.933,-55.5253,-170.211,-177.126,0,-114.684,-78.4897,-111.965,-103.755,-218.439,-182.244,-126.715,-230.471,-88.7512,-203.435,-167.24,-111.712,-215.468,-213.963,-88.098,-202.782,-166.587,-111.059,-214.815,-199.811,-213.31,-94.0471,-208.731,-172.536,-117.008,-220.763,-205.76,-205.107,-219.86,-88.804,-203.488,-167.293,-111.765,-215.52,-200.517,-199.864,-205.813,-214.015,-88.3728,-203.057,-166.862,-111.334,-215.089,-200.086,-199.433,-205.382,-200.139,-213.584 0|0:239:40,16,28,34,7,6,21,2,12,4:40:1574:16,28,34,7,6,21,2,12,4:550,970,956,273,230,751,43,311,151:-63.7292,-34.7179,-159.398,0,-88.4466,-121.069,-6.72288,-95.1683,-60.4523,-125.984,-53.8493,-142.294,-107.577,-114.298,-181.238,-57.3685,-145.813,-111.097,-117.818,-164.944,-185.058,-17.7757,-106.222,-71.505,-78.2269,-125.352,-128.872,-140.951,-72.5041,-160.948,-126.232,-132.953,-180.079,-183.598,-144.007,-201.397,-53.8333,-142.277,-107.561,-114.283,-161.408,-164.927,-125.336,-180.062,-179.716,-64.2837,-152.728,-118.012,-124.732,-171.859,-175.378,-135.787,-190.513,-171.842,-192.575 1|0:238:19,2,16,44,13,13,31,2,32,19:19:741:2,16,44,13,13,31,2,32,19:76,580,1149,505,466,1200,80,1187,698:-125.044,-125.025,-185.336,-85.6884,-140.863,-141.786,-52.4733,-107.647,-68.3126,-100.14,-90.1708,-145.346,-106.01,-72.7942,-147.171,-95.4568,-150.632,-111.296,-78.0807,-115.778,-152.457,-33.7655,-88.9414,-49.605,-16.3914,-54.0873,-59.3735,-85.3483,-124.184,-179.359,-140.023,-106.806,-144.505,-149.791,-88.1007,-184.495,-36.0839,-91.2596,-51.9234,-18.7105,-56.4056,-61.6919,0,-90.4189,-87.3655,-76.3012,-131.476,-92.1403,-58.9258,-96.6226,-101.909,-40.2177,-130.636,-42.5361,-131.495 0|0:241:23,6,18,43,27,5,22,6,36,9:23:907:6,18,43,27,5,22,6,36,9:228,628,1200,1038,180,832,235,1190,331:-93.8243,-83.2057,-156.033,-52.5656,-109.657,-121.781,-15.8933,-72.9843,-42.3457,-77.5818,-17.9639,-75.0564,-44.4164,-7.74464,-84.471,-87.1484,-144.24,-113.6,-76.927,-78.9991,-160.276,-34.959,-92.0511,-61.4112,-24.7393,-26.8098,-95.9938,-102.971,-81.4584,-138.55,-107.91,-71.2369,-73.3091,-142.492,-90.3039,-154.286,-10.2168,-67.3089,-36.6694,0,-2.06775,-71.2516,-19.0628,-65.5615,-74.0139,-74.9409,-132.032,-101.392,-64.7198,-66.7916,-135.975,-83.7864,-130.285,-59.0442,-146.865 dDocent_Contig_2078 44 . G A 134.446 . AB=0.125;ABP=130.041;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=1X;DP=880;DPB=880;DPRA=1.10526;EPP=57.2971;EPPR=1833.65;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=933;QR=34037;RO=855;RPL=0;RPP=57.2971;RPPR=1833.65;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=855;SRP=1859.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:104:91,13:91:3586:13:507:-14.6658,0,-291.452 0/0:129:129,0:129:5136:0:0:0,-38.8329,-462.113 0/0:232:231,1:231:9207:1:9:0,-68.939,-827.166 0/0:126:115,11:115:4565:11:417:0,-0.0602377,-372.916 0/0:123:123,0:123:4959:0:0:0,-37.0267,-446.182 0/0:166:166,0:166:6584:0:0:0,-49.971,-592.277 dDocent_Contig_2079 19 . T G 415.167 . AB=0.11358;ABP=528.287;AC=2;AF=0.166667;AN=12;AO=80;CIGAR=1X;DP=1317;DPB=1317;DPRA=0;EPP=176.728;EPPR=2684.78;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.7125;PAIREDR=0.99919;PAO=0;PQA=0;PQR=0;PRO=0;QA=3179;QR=49453;RO=1235;RPL=0;RPP=176.728;RPPR=2684.78;RPR=80;RUN=1;SAF=80;SAP=176.728;SAR=0;SRF=1235;SRP=2684.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:163:159,4:159:6374:4:126:0,-37.4213,-561.74 0/1:207:180,27:180:7163:27:1072:-34.4532,0,-582.012 0/0:153:148,4:148:5965:4:161:0,-31.2893,-521.732 0/1:198:179,19:179:7098:19:773:-10.2853,0,-578.897 0/0:360:350,9:350:14066:9:361:0,-75.6165,-1231.98 0/0:236:219,17:219:8787:17:686:0,-8.97341,-728.215 dDocent_Contig_2080 29 . C T 3387.29 . AB=0.0655738;ABP=302.994;AC=0;AF=0;AN=12;AO=12;CIGAR=1X1M1D17M;DP=318;DPB=308.2;DPRA=0;EPP=29.068;EPPR=248.387;GTI=0;LEN=1;MEANALT=7.33333;MQM=60;MQMR=60;NS=6;NUMALT=6;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=461;QR=4345;RO=113;RPL=0;RPP=29.068;RPPR=248.387;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=113;SRP=248.387;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:37:12,1,0,8,13,1,2:12:451:1,0,8,13,1,2:41,0,283,454,38,81:-33.2906,-33.5167,-70.1656,-36.9029,-70.4666,-73.852,-13.8585,-47.4225,-50.8081,-48.3999,0,-33.5612,-36.9469,-13.9094,-33.0335,-33.7855,-67.3496,-70.735,-47.6912,-33.83,-70.434,-30.2198,-63.785,-67.1705,-44.1262,-30.2648,-64.0535,-66.5684 0|0:64:34,4,0,6,12,3,1:34:1300:4,0,6,12,3,1:163,0,228,468,120,40:-28.246,-25.0274,-130.502,-38.481,-131.706,-145.156,-19.7792,-113.007,-126.457,-124.651,0,-93.2366,-106.687,-87.9873,-103.075,-28.5921,-121.82,-135.269,-116.57,-96.7999,-134.366,-35.1848,-128.411,-141.86,-123.161,-103.391,-131.974,-141.559 0|0:82:40,7,0,10,18,0,0:40:1554:7,0,10,18,0,0:257,0,382,705,0,0:-45.9406,-36.9828,-162.577,-57.9818,-164.684,-185.682,-26.6413,-133.347,-154.345,-151.335,0,-106.714,-127.713,-96.3748,-122.294,-57.9818,-164.684,-185.682,-154.345,-127.713,-185.682,-57.9818,-164.684,-185.682,-154.345,-127.713,-185.682,-185.682 0|0:46:18,0,0,3,25,0,0:18:693:0,0,3,25,0,0:0,0,115,967,0,0:-74.0029,-79.4214,-136.317,-79.4214,-136.317,-136.317,-69.9839,-126.879,-126.879,-125.976,0,-56.8974,-56.8974,-47.4597,-49.3716,-79.4214,-136.317,-136.317,-126.879,-56.8974,-136.317,-79.4214,-136.317,-136.317,-126.879,-56.8974,-136.317,-136.317 0|0:38:0,0,5,5,23,3,0:0:0:0,5,5,23,3,0:0,182,173,845,119,0:-83.9486,-83.9486,-83.9486,-69.0866,-69.0866,-67.5814,-69.8996,-69.8996,-55.0378,-68.3945,-14.8717,-14.8717,0,-0.819322,-7.948,-74.1496,-74.1496,-59.2869,-60.1002,-5.06255,-73.2465,-83.9486,-83.9486,-69.0866,-69.8996,-14.8717,-74.1496,-83.9486 0|0:51:9,0,0,4,25,12,0:9:347:0,0,4,25,12,0:0,0,161,970,441,0:-84.5115,-87.2208,-115.714,-87.2208,-115.714,-115.714,-73.9497,-102.443,-102.443,-101.239,-7.53718,-36.0328,-36.0328,-22.7597,-28.5071,-51.1835,-79.6753,-79.6753,-66.4046,0,-76.0629,-87.2208,-115.714,-115.714,-102.443,-36.0328,-79.6753,-115.714 dDocent_Contig_2081 18 . C T 13707 . AB=0.0774306;ABP=4469.88;AC=2;AF=0.166667;AN=12;AO=223;CIGAR=1X1M1X;DP=2880;DPB=2880;DPRA=0;EPP=487.249;EPPR=4467.56;GTI=0;LEN=1;MEANALT=3.66667;MQM=59.843;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.999514;PAO=0;PQA=0;PQR=0;PRO=0;QA=8872;QR=81553;RO=2056;RPL=0;RPP=487.249;RPPR=4467.56;RPR=223;RUN=1;SAF=223;SAP=487.249;SAR=0;SRF=2056;SRP=4467.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:475:346,65,60:346:13665:65,60:2577,2435:-107.95,0,-1104.79,-11.2828,-923.544,-1117.59 0|1:524:432,51,38:432:17146:51,38:2041,1539:-38.0835,0,-1396.06,-41.2247,-1284.51,-1441.2 0|0:331:242,22,66:242:9601:22,66:874,2641:-144.692,-145.593,-929.26,0,-718.343,-770.424 0|0:477:328,36,113:328:13023:36,113:1444,4554:-276.608,-256.372,-1317.57,0,-953.06,-1038.02 0|0:517:350,20,142:350:13914:20,142:786,5703:-364.548,-405.585,-1545.07,0,-1081.19,-1102.77 0|0:556:358,29,168:358:14204:29,168:1150,6768:-450.04,-463.161,-1623.61,0,-1074.54,-1118.61 dDocent_Contig_2082 98 . N T 619.492 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=20;CIGAR=1X;DP=20;DPB=20;DPRA=0;EPP=46.4397;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.95;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=657;QR=0;RO=0;RPL=20;RPP=46.4397;RPPR=0;RPR=0;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:98:-9.14405,-0.90309,0 1/1:4:0,4:0:0:4:139:-12.8527,-1.20412,0 1/1:7:0,7:0:0:7:233:-21.2957,-2.10721,0 1/1:4:0,4:0:0:4:118:-10.9133,-1.20412,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_2085 7 . C T 2371.7 . AB=0.468439;ABP=5.61462;AC=6;AF=0.5;AN=12;AO=141;CIGAR=1X3M1D1M2X;DP=301;DPB=283.375;DPRA=0;EPP=309.188;EPPR=341.76;GTI=0;LEN=1;MEANALT=1.66667;MQM=26.8723;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5412;QR=6049;RO=156;RPL=0;RPP=309.188;RPPR=341.76;RPR=141;RUN=1;SAF=141;SAP=309.188;SAR=0;SRF=156;SRP=341.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:53:34,18:34:1323:18:674:-27.3657,0,-103.482 0|1:58:32,24:32:1239:24:926:-39.7915,0,-94.7193 0|1:31:12,18:12:465:18:700:-33.8466,0,-32.9997 0|1:45:13,32:13:506:32:1232:-63.5822,0,-32.342 0|1:51:38,13:38:1480:13:492:-16.0215,0,-118.116 0|1:63:27,36:27:1036:36:1388:-67.7847,0,-74.578 dDocent_Contig_2087 7 . T C 2509.78 . AB=0.0593607;ABP=372.349;AC=0;AF=0;AN=12;AO=13;CIGAR=1X2M1X16M;DP=451;DPB=450;DPRA=0;EPP=31.2394;EPPR=152.842;GTI=0;LEN=1;MEANALT=23;MQM=60;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0.222222;PQA=0;PQR=0;PRO=0.222222;QA=490;QR=2648;RO=69;RPL=0;RPP=31.2394;RPPR=152.842;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=69;SRP=152.842;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:68:4,3,4,2,0,5,7,14,0,2:4:154:3,4,2,0,5,7,14,0,2:98,149,77,0,189,280,563,0,78:-55.6263,-48.9203,-60.6626,-44.701,-49.4364,-56.1425,-50.545,-55.2804,-51.0612,-62.5886,-56.8304,-61.5657,-57.3466,-63.1906,-69.476,-41.3378,-46.0734,-41.854,-47.6981,-53.9835,-52.4784,-33.7625,-38.4982,-34.2788,-40.1229,-46.4085,-30.9156,-44.3012,-10.4234,-15.1596,-10.9398,-16.7841,-23.0699,-7.57631,0,-18.8555,-56.8304,-61.5657,-57.3466,-63.1906,-69.476,-53.9835,-46.4085,-23.0699,-69.476,-50.418,-55.1533,-50.9341,-56.7782,-63.0636,-47.571,-39.9958,-16.657,-63.0636,-62.4615 0|0:89:29,11,5,3,0,0,1,7,4,5:29:1111:11,5,3,0,0,1,7,4,5:408,186,116,0,0,40,285,156,190:-24.6559,0,-87.8757,-18.2445,-76.0466,-107.925,-23.9144,-81.7163,-99.9594,-114.197,-33.3858,-91.187,-109.43,-115.1,-124.57,-33.3858,-91.187,-109.43,-115.1,-124.57,-124.57,-30.09,-87.8915,-106.135,-111.804,-121.275,-121.275,-120.974,-9.86861,-67.6723,-85.9157,-91.5855,-101.056,-101.056,-97.7608,-98.9491,-20.563,-78.3653,-96.6084,-102.278,-111.749,-111.749,-108.453,-88.2345,-110.545,-17.8022,-75.6045,-93.8476,-99.5174,-108.988,-108.988,-105.693,-85.4737,-96.1664,-107.483 0|0:53:9,4,5,4,0,0,11,5,0,1:9:343:4,5,4,0,0,11,5,0,1:152,192,154,0,0,434,204,0,39:-33.0078,-23.2502,-50.1823,-20.0469,-35.7166,-46.6781,-23.146,-38.8156,-35.6124,-50.0782,-35.717,-51.3864,-48.1832,-51.2823,-63.853,-35.717,-51.3864,-48.1832,-51.2823,-63.853,-63.853,0,-15.6708,-12.4673,-15.5666,-28.1381,-28.1381,-24.8268,-18.8809,-34.551,-31.3476,-34.4468,-47.0179,-47.0179,-11.3011,-45.5127,-35.717,-51.3864,-48.1832,-51.2823,-63.853,-63.853,-28.1381,-47.0179,-63.853,-32.5107,-48.1802,-44.977,-48.076,-60.6468,-60.6468,-24.9317,-43.8116,-60.6468,-60.3457 0|0:73:9,8,3,4,4,5,6,6,0,8:9:338:8,3,4,4,5,6,6,0,8:304,108,148,158,190,228,243,0,310:-22.7625,-0.537753,-25.8196,-16.6991,-19.4551,-43.4856,-13.462,-16.218,-32.379,-39.9475,-23.4553,-26.211,-42.3707,-39.1338,-49.9384,-9.88846,-12.6445,-28.8057,-25.5685,-35.5607,-36.0731,-6.77571,-9.53174,-25.693,-22.4558,-32.4483,-18.8824,-32.6594,-5.43018,-8.18625,-24.3477,-21.1105,-31.103,-17.537,-14.4242,-31.3142,-25.4718,-28.2278,-44.3887,-41.1516,-51.1425,-37.5783,-34.4656,-33.1204,-53.1613,0,-2.75605,-18.9175,-15.6803,-25.6734,-12.1068,-8.99404,-7.64855,-27.6902,-25.282 0|0:78:6,2,1,8,0,3,11,18,0,1:6:233:2,1,8,0,3,11,18,0,1:73,39,304,0,111,439,722,0,39:-74.7035,-70.5456,-89.0891,-73.3245,-86.506,-92.1691,-51.7217,-64.9034,-67.6822,-68.4592,-76.5097,-89.6912,-92.4701,-70.8674,-95.6553,-67.43,-80.6116,-83.3905,-61.7878,-86.5756,-85.6726,-40.3512,-53.5332,-56.3121,-34.709,-59.4974,-50.4176,-56.186,-17.0141,-30.1965,-32.9754,-11.3718,-36.1608,-27.0809,0,-30.7422,-76.5097,-89.6912,-92.4701,-70.8674,-95.6553,-86.5756,-59.4974,-36.1608,-95.6553,-73.3036,-86.4851,-89.2641,-67.6614,-92.4492,-83.3696,-56.2912,-32.9546,-92.4492,-92.1482 0|0:90:12,3,3,3,0,0,7,17,8,5:12:469:3,3,3,0,0,7,17,8,5:117,117,112,0,0,262,669,321,189:-51.4231,-45.4172,-83.0753,-45.4798,-74.4229,-83.1379,-45.9114,-74.8544,-74.917,-83.5694,-55.0354,-83.9784,-84.041,-84.4725,-93.5965,-55.0354,-83.9784,-84.041,-84.4725,-93.5965,-93.5965,-33.5839,-62.527,-62.5895,-63.0211,-72.145,-72.145,-70.0378,0,-28.944,-29.0065,-29.4382,-38.5623,-38.5623,-17.1105,-33.4448,-28.5837,-57.5272,-57.5897,-58.0213,-67.1453,-67.1453,-45.6937,-12.1101,-64.7371,-39.5428,-68.4859,-68.5484,-68.98,-78.104,-78.104,-56.6525,-23.0695,-51.6527,-76.5988 dDocent_Contig_2089 8 . T G 1392.78 . AB=0.0605263;ABP=640.486;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=2M2X5M1X2M2X1M1X6M;DP=380;DPB=378.773;DPRA=0;EPP=52.9542;EPPR=122.441;GTI=0;LEN=1;MEANALT=19.1667;MQM=56.4783;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0.1;PQA=4.1;PQR=4.1;PRO=0.1;QA=826;QR=2127;RO=55;RPL=0;RPP=52.9542;RPPR=122.441;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=55;SRP=122.441;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:67:1,2,2,2,8,6,8,5,9,1:1:40:2,2,2,8,6,8,5,9,1:77,76,78,299,224,264,165,362,41:-50.7286,-44.7064,-47.4001,-44.7961,-41.7686,-47.4897,-44.623,-41.5956,-41.6852,-47.3167,-26.5446,-23.517,-23.6067,-23.4336,-27.4321,-32.702,-29.6745,-29.7642,-29.5911,-11.5124,-34.1916,-31.8527,-28.8254,-28.9151,-28.742,-10.6644,-16.8216,-32.7401,-39.0438,-36.0164,-36.1061,-35.933,-17.8551,-24.0123,-23.164,-40.8343,-21.1904,-18.1628,-18.2525,-18.0794,0,-6.15779,-5.3098,-12.5007,-21.777,-47.6448,-44.6173,-44.7069,-44.5339,-26.4554,-32.6128,-31.7636,-38.9546,-21.1012,-50.6394 0|0:62:8,0,1,1,4,4,6,4,3,6:8:312:0,1,1,4,4,6,4,3,6:0,39,39,155,130,198,132,96,243:-17.6341,-20.0423,-45.6915,-16.836,-42.4853,-42.1843,-16.839,-42.4884,-39.2821,-42.1873,-7.30633,-32.956,-29.7498,-29.7528,-31.7519,-9.56133,-35.2104,-32.0041,-32.0072,-22.475,-34.0062,-5.66151,-31.3099,-28.1038,-28.1069,-18.5748,-20.8296,-29.5038,-10.4549,-36.1036,-32.8975,-32.9005,-23.3684,-25.623,-21.7231,-34.8995,-12.3158,-37.9649,-34.7586,-34.7617,-25.2295,-27.484,-23.5839,-28.3774,-37.0618,0,-25.6503,-22.4439,-22.447,-12.9143,-15.1691,-11.2691,-16.0626,-17.9237,-23.8441 1|0:53:7,2,0,0,8,3,4,4,9,4:7:271:2,0,0,8,3,4,4,9,4:78,0,0,304,116,132,132,363,158:-30.4948,-26.1888,-47.8523,-32.602,-48.4543,-54.8672,-32.602,-48.4543,-54.8672,-54.8672,-7.6666,-23.52,-29.9332,-29.9332,-27.5249,-23.0803,-38.933,-45.346,-45.346,-20.4114,-44.4429,-23.015,-38.8669,-45.2797,-45.2797,-20.3463,-35.7586,-44.0755,-23.015,-38.8669,-45.2797,-45.2797,-20.3463,-35.7586,-35.693,-44.0755,-2.66902,-18.5232,-24.9367,-24.9367,0,-15.4146,-15.3495,-15.3495,-22.2275,-19.5978,-35.4507,-41.8638,-41.8638,-16.9289,-32.3423,-32.2765,-32.2765,-11.9319,-40.6597 0|0:52:8,5,2,3,5,2,0,5,6,1:8:315:5,2,3,5,2,0,5,6,1:195,75,112,189,76,0,151,245,40:-17.8124,-4.18939,-28.6018,-14.0774,-23.9638,-39.3924,-11.0574,-20.9438,-30.8314,-36.0714,-4.72761,-14.6142,-24.5018,-21.4819,-29.1398,-13.9923,-23.8787,-33.7662,-30.7463,-24.4167,-39.3073,-20.2206,-30.107,-39.9944,-36.9745,-30.6449,-39.9094,-46.1376,-9.42173,-19.3073,-29.1941,-26.1745,-19.8454,-29.1091,-35.3368,-33.8316,0,-9.88695,-19.7749,-16.7549,-10.4251,-19.6898,-25.9182,-15.1186,-24.1121,-16.925,-26.8114,-36.6989,-33.679,-27.3494,-36.6139,-42.8421,-32.0415,-22.6226,-42.5411 0|0:57:21,1,2,2,4,1,3,7,3,0:21:795:1,2,2,4,1,3,7,3,0:39,69,78,145,39,99,231,119,0:-10.4615,-13.5751,-78.4636,-11.177,-73.1599,-75.7646,-10.3732,-72.357,-69.9591,-74.9618,-4.93998,-66.9254,-64.5275,-63.7246,-68.9281,-13.5782,-75.5608,-73.1629,-72.3601,-66.9284,-78.4666,-9.59015,-71.5723,-69.1745,-68.3716,-62.9401,-71.5754,-73.876,0,-61.983,-59.5854,-58.7823,-53.3509,-61.9861,-57.9983,-63.0826,-6.97998,-68.9655,-66.5675,-65.7646,-60.3329,-68.9685,-64.98,-55.3907,-71.2693,-16.7831,-78.7646,-76.3667,-75.5639,-70.1323,-78.7677,-74.7791,-65.1899,-72.1724,-81.9714 0|0:89:10,0,5,1,3,7,11,7,7,8:10:394:0,5,1,3,7,11,7,7,8:0,190,39,111,241,363,223,285,308:-23.3628,-26.3731,-58.7942,-10.788,-43.2098,-41.7046,-23.1696,-55.5909,-40.0064,-55.2899,-17.2913,-49.7128,-34.1282,-46.5094,-48.8097,-6.89506,-39.3168,-23.7322,-36.1134,-30.2352,-37.2096,0,-32.4212,-16.8369,-29.2179,-23.3399,-12.9444,-29.1098,-10.0973,-42.5184,-26.934,-39.3151,-33.437,-23.0414,-16.1467,-40.4112,-2.85602,-35.2785,-19.6935,-32.0751,-26.1968,-15.8006,-8.90528,-19.0026,-33.1713,-1.08329,-33.5057,-17.9208,-30.3023,-24.424,-14.0279,-7.13276,-17.2299,-9.98901,-31.0974 dDocent_Contig_2090 11 . C A 2695.13 . AB=0.0576923;ABP=91.3725;AC=0;AF=0;AN=12;AO=3;CIGAR=1X2M2X2M2X1M1X;DP=392;DPB=372.727;DPRA=0;EPP=9.52472;EPPR=385.189;GTI=0;LEN=1;MEANALT=2;MQM=21;MQMR=59.0341;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.926136;PAO=0;PQA=0;PQR=0;PRO=0;QA=119;QR=6853;RO=176;RPL=0;RPP=9.52472;RPPR=385.189;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=176;SRP=385.189;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:85:38,0,47:38:1471:0,47:0,1149:-65.4843,-76.9235,-195.883,0,-119.267,-105.118 0|0:106:48,0,57:48:1871:0,57:0,1227:-64.0707,-78.5202,-232.398,0,-154.01,-136.851 0|0:46:20,0,26:20:786:0,26:0,633:-36.4601,-42.4807,-107.208,0,-65.0427,-57.216 0|0:52:20,3,29:20:784:3,29:119,717:-41.9539,-43.2241,-106.865,0,-59.9043,-55.9018 0|0:54:25,0,29:25:970:0,29:0,669:-36.5279,-44.0536,-123.567,0,-79.8145,-71.0846 0|0:49:25,0,24:25:971:0,24:0,636:-36.2375,-43.7632,-122.726,0,-79.2711,-72.0464 dDocent_Contig_2091 9 . T C 673.16 . AB=0.0909091;ABP=50.9801;AC=0;AF=0;AN=12;AO=3;CIGAR=1M1D1X3M2X1M1X;DP=124;DPB=118.9;DPRA=0;EPP=9.52472;EPPR=148.499;GTI=0;LEN=1;MEANALT=2;MQM=27;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.761194;PAO=0;PQA=0;PQR=55.5;PRO=1.5;QA=120;QR=2617;RO=67;RPL=0;RPP=9.52472;RPPR=148.499;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=67;SRP=148.499;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:18:8,0,10:8:306:0,10:0,270:-16.2536,-18.6619,-43.8235,0,-25.3307,-22.3204 0|0:17:11,0,5:11:436:0,5:0,135:-5.958,-9.26933,-45.2564,0,-36.007,-34.5018 0|0:22:12,0,10:12:476:0,10:0,270:-15.2119,-18.8243,-58.0937,0,-39.5804,-36.5701 0|0:33:22,3,8:22:845:3,8:120,210:-7.68021,-7.96353,-76.5303,0,-63.1451,-67.0526 0|0:13:4,0,9:4:158:0,9:0,243:-15.7617,-16.9658,-30.0153,0,-13.3965,-10.6873 0|0:21:10,0,11:10:396:0,11:0,297:-17.6724,-20.6827,-53.3507,0,-32.9894,-29.6781 dDocent_Contig_2092 7 . C T 1267.27 . AB=0.480176;ABP=3.78514;AC=6;AF=0.5;AN=12;AO=109;CIGAR=1X3M1D1M2X;DP=227;DPB=213.375;DPRA=0;EPP=239.701;EPPR=257.073;GTI=0;LEN=1;MEANALT=1.16667;MQM=21;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4169;QR=4543;RO=117;RPL=0;RPP=239.701;RPPR=257.073;RPR=109;RUN=1;SAF=109;SAP=239.701;SAR=0;SRF=117;SRP=257.073;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:36:23,13:23:900:13:498:-13.8282,0,-70.4781 0|1:42:26,15:26:1009:15:573:-15.695,0,-78.3639 0|1:32:20,12:20:781:12:460:-13.167,0,-60.9804 0|1:26:10,16:10:396:16:608:-22.4909,0,-28.173 0|1:34:9,25:9:346:25:957:-37.0382,0,-21.2634 0|1:57:29,28:29:1111:28:1073:-35.7297,0,-83.1294 dDocent_Contig_2097 7 . C T 1640.41 . AB=0.432836;ABP=10.8859;AC=6;AF=0.5;AN=12;AO=87;CIGAR=1X3M1D1M2X3M;DP=201;DPB=193.091;DPRA=0;EPP=191.928;EPPR=246.215;GTI=0;LEN=1;MEANALT=1.16667;MQM=41.3793;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.666667;PAIREDR=0.580357;PAO=0;PQA=0;PQR=0;PRO=0;QA=2690;QR=4391;RO=112;RPL=0;RPP=191.928;RPPR=246.215;RPR=87;RUN=1;SAF=87;SAP=191.928;SAR=0;SRF=112;SRP=246.215;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:35:19,0,16:19:746:0,16:0,530:-36.2047,-41.9242,-103.318,0,-61.748,-56.9315 0|1:53:33,0,20:33:1296:0,20:0,529:-29.1516,-39.0855,-145.769,0,-106.987,-100.966 0|1:24:17,0,7:17:668:0,7:0,252:-15.4792,-20.5968,-75.5673,0,-55.3363,-53.2291 0|1:36:22,2,12:22:861:2,12:79,344:-19.2375,-19.3489,-89.6182,0,-64.2982,-67.1802 0|1:22:10,0,12:10:391:0,12:0,375:-26.2846,-29.2949,-61.4825,0,-32.5378,-28.9255 0|1:31:11,0,20:11:429:0,20:0,660:-48.9052,-52.2165,-87.5038,0,-35.6528,-29.6322 dDocent_Contig_2098 14 . G T 2026.77 . AB=0.129278;ABP=316.966;AC=0;AF=0;AN=12;AO=34;CIGAR=3M1X3M1X;DP=263;DPB=263;DPRA=0;EPP=76.8404;EPPR=168.042;GTI=0;LEN=1;MEANALT=5.5;MQM=48.7059;MQMR=59.9868;NS=6;NUMALT=8;ODDS=0;PAIRED=0.882353;PAIREDR=0.842105;PAO=0;PQA=0;PQR=0;PRO=0;QA=1314;QR=2945;RO=76;RPL=0;RPP=76.8404;RPPR=168.042;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=76;SRP=168.042;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:57:12,0,0,21,0,0,9,0,12:12:469:0,0,21,0,0,9,0,12:0,0,767,0,0,354,0,456:-57.1818,-60.7941,-99.3571,-60.7941,-99.3571,-99.3571,0,-38.5604,-38.5604,-32.2388,-60.7941,-99.3571,-99.3571,-38.5604,-99.3571,-60.7941,-99.3571,-99.3571,-38.5604,-99.3571,-99.3571,-31.767,-70.3319,-70.3319,-9.53691,-70.3319,-70.3319,-67.6227,-60.7941,-99.3571,-99.3571,-38.5604,-99.3571,-99.3571,-70.3319,-99.3571,-23.4011,-61.9658,-61.9658,-1.1742,-61.9658,-61.9658,-32.9394,-61.9658,-58.3535 0|0:72:17,1,0,16,0,8,14,0,14:17:661:1,0,16,0,8,14,0,14:39,0,584,0,220,536,0,557:-41.7779,-43.7733,-97.8021,-46.8954,-98.1031,-101.225,0,-51.2128,-54.3347,-49.5182,-46.8954,-98.1031,-101.225,-54.3347,-101.225,-30.875,-82.0803,-85.202,-38.3155,-85.202,-82.7937,-11.8655,-63.0728,-66.1945,-19.3076,-66.1945,-50.1766,-61.9801,-46.8954,-98.1031,-101.225,-54.3347,-101.225,-85.202,-66.1945,-101.225,-1.01362,-52.2292,-55.3512,-8.45645,-55.3512,-39.33,-20.3207,-55.3512,-51.1368 0|0:40:8,0,0,5,0,3,6,3,15:8:310:0,0,5,0,3,6,3,15:0,0,193,0,120,229,117,584:-44.4466,-46.8549,-72.3228,-46.8549,-72.3228,-72.3228,-31.0049,-56.473,-56.473,-54.9679,-46.8549,-72.3228,-72.3228,-56.473,-72.3228,-36.968,-62.4364,-62.4364,-46.5864,-62.4364,-61.5333,-28.1332,-53.6011,-53.6011,-37.7514,-53.6011,-43.7145,-51.7949,-37.2372,-62.7053,-62.7053,-46.8554,-62.7053,-52.8187,-43.9836,-61.8022,0,-25.4674,-25.4674,-9.61807,-25.4674,-15.5804,-6.74702,-15.8499,-20.952 0|0:52:23,0,0,16,0,0,2,0,4:23:889:0,0,16,0,0,2,0,4:0,0,582,0,0,74,0,156:-39.794,-46.7177,-119.749,-46.7177,-119.749,-119.749,0,-73.0406,-73.0406,-68.2241,-46.7177,-119.749,-119.749,-73.0406,-119.749,-46.7177,-119.749,-119.749,-73.0406,-119.749,-119.749,-40.6635,-113.696,-113.696,-66.9877,-113.696,-113.696,-113.094,-46.7177,-119.749,-119.749,-73.0406,-119.749,-119.749,-113.696,-119.749,-34.1152,-107.15,-107.15,-60.4414,-107.15,-107.15,-101.097,-107.15,-105.946 0|0:11:6,2,0,0,0,0,1,0,2:6:233:2,0,0,0,0,1,0,2:80,0,0,0,0,40,0,78:-4.60451,-0.0294832,-18.5693,-6.41069,-19.1714,-25.5543,-6.41069,-19.1714,-25.5543,-25.5543,-6.41069,-19.1714,-25.5543,-25.5543,-25.5543,-6.41069,-19.1714,-25.5543,-25.5543,-25.5543,-25.5543,-3.11347,-15.8751,-22.2582,-22.2582,-22.2582,-22.2582,-21.9571,-6.41069,-19.1714,-25.5543,-25.5543,-25.5543,-25.5543,-22.2582,-25.5543,0,-12.7598,-19.1426,-19.1426,-19.1426,-19.1426,-15.8462,-19.1426,-18.5405 0|0:31:10,0,2,10,2,2,2,0,3:10:383:0,2,10,2,2,2,0,3:0,81,366,78,79,81,0,116:-26.0204,-29.0307,-60.4648,-22.3484,-53.7838,-53.1817,0,-31.4271,-24.7462,-28.4168,-22.6605,-54.0952,-47.414,-25.0582,-53.4931,-22.5277,-53.9627,-47.2814,-24.9254,-47.5929,-53.3606,-22.5794,-54.0142,-47.333,-24.9771,-47.6445,-47.512,-53.4122,-29.0307,-60.4648,-53.7838,-31.4271,-54.0952,-53.9627,-54.0142,-60.4648,-19.5005,-50.9356,-44.2543,-21.8991,-44.5658,-44.4332,-44.4849,-50.9356,-50.0325 dDocent_Contig_2099 9 . A G 1931.84 . AB=0.114286;ABP=48.239;AC=0;AF=0;AN=12;AO=4;CIGAR=3M1X4M1X3M1X;DP=261;DPB=260.769;DPRA=0;EPP=11.6962;EPPR=150.67;GTI=0;LEN=1;MEANALT=11;MQM=57;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=156;QR=2629;RO=68;RPL=0;RPP=11.6962;RPPR=150.67;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=68;SRP=150.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:40:13,0,0,3,0,3,11,0,9,0:13:498:0,0,3,0,3,11,0,9,0:0,0,117,0,122,427,0,350,0:-31.1552,-35.0686,-75.9392,-35.0686,-75.9392,-75.9392,-27.3355,-68.2034,-68.2034,-67.3003,-35.0686,-75.9392,-75.9392,-68.2034,-75.9392,-25.0025,-65.8741,-65.8741,-58.1385,-65.8741,-64.971,0,-40.8719,-40.8719,-33.138,-40.8719,-30.8058,-37.5606,-35.0686,-75.9392,-75.9392,-68.2034,-75.9392,-65.8741,-40.8719,-75.9392,-6.3048,-47.1765,-47.1765,-39.4421,-47.1765,-37.1106,-12.1075,-47.1765,-44.4672,-35.0686,-75.9392,-75.9392,-68.2034,-75.9392,-65.8741,-40.8719,-75.9392,-47.1765,-75.9392 0|0:53:12,0,5,0,1,2,6,2,16,0:12:459:0,5,0,1,2,6,2,16,0:0,198,0,39,80,226,74,614,0:-46.7761,-50.3885,-88.0532,-34.0894,-71.7548,-70.2496,-50.3885,-88.0532,-71.7548,-88.0532,-47.1823,-84.8472,-68.5487,-84.8472,-84.5461,-43.7975,-81.4625,-65.1639,-81.4625,-78.2564,-80.8605,-32.5811,-70.2453,-53.9469,-70.2453,-67.0392,-63.6545,-68.4391,-44.335,-81.9997,-65.7012,-81.9997,-78.7937,-75.409,-64.1919,-81.3977,0,-37.6658,-21.3663,-37.6658,-34.4596,-31.0747,-19.8587,-31.6124,-32.8493,-50.3885,-88.0532,-71.7548,-88.0532,-84.8472,-81.4625,-70.2453,-81.9997,-37.6658,-88.0532 0|0:35:10,4,2,0,2,3,3,0,6,0:10:390:4,2,0,2,3,3,0,6,0:156,80,0,75,118,119,0,238,0:-16.5652,-6.76208,-37.6202,-12.9835,-32.2329,-44.4434,-19.5755,-38.8244,-45.0454,-51.6367,-13.433,-32.6819,-38.903,-45.4943,-44.8922,-9.86664,-29.1162,-35.3373,-41.9288,-35.7863,-41.0257,-9.78776,-29.0374,-35.2585,-41.85,-35.7075,-32.1418,-40.9469,-19.5755,-38.8244,-45.0454,-51.6367,-45.4943,-41.9288,-41.85,-51.6367,0,-19.2508,-25.4721,-32.0638,-25.9212,-22.3553,-22.2765,-32.0638,-30.2576,-19.5755,-38.8244,-45.0454,-51.6367,-45.4943,-41.9288,-41.85,-51.6367,-32.0638,-51.6367 0|0:44:8,0,2,0,0,14,9,0,6,1:8:306:0,2,0,0,14,9,0,6,1:0,80,0,0,556,344,0,233,40:-46.4505,-48.8588,-73.966,-42.268,-67.3753,-66.7732,-48.8588,-73.966,-67.3753,-73.966,-48.8588,-73.966,-67.3753,-73.966,-73.966,-3.08515,-28.1931,-21.6018,-28.1931,-28.1931,-23.9786,-20.6673,-45.7736,-39.1828,-45.7736,-45.7736,0,-43.0643,-48.8588,-73.966,-67.3753,-73.966,-73.966,-28.1931,-45.7736,-73.966,-29.7198,-54.8268,-48.236,-54.8268,-54.8268,-9.05288,-26.6348,-54.8268,-53.0207,-45.5634,-70.6707,-64.0799,-70.6707,-70.6707,-24.8974,-42.4782,-70.6707,-51.5314,-70.3696 0|0:51:13,0,3,0,0,7,13,0,7,0:13:505:0,3,0,0,7,13,0,7,0:0,118,0,0,281,508,0,276,0:-36.5434,-40.4568,-81.954,-30.7536,-72.2509,-71.3478,-40.4568,-81.954,-72.2509,-81.954,-40.4568,-81.954,-72.2509,-81.954,-81.954,-17.2993,-58.7974,-49.0941,-58.7974,-58.7974,-56.6902,0,-41.4957,-31.7927,-41.4957,-41.4957,-18.3389,-37.5823,-40.4568,-81.954,-72.2509,-81.954,-81.954,-58.7974,-41.4957,-81.954,-17.755,-59.2526,-49.5493,-59.2526,-59.2526,-36.0954,-18.7945,-59.2526,-57.1454,-40.4568,-81.954,-72.2509,-81.954,-81.954,-58.7974,-41.4957,-81.954,-59.2526,-81.954 0|0:38:12,0,4,0,0,10,3,2,1,2:12:471:0,4,0,0,10,3,2,1,2:0,160,0,0,373,121,78,41,78:-26.915,-30.5274,-69.2711,-17.3422,-56.0884,-54.8843,-30.5274,-69.2711,-56.0884,-69.2711,-30.5274,-69.2711,-56.0884,-69.2711,-69.2711,0,-38.7458,-25.5625,-38.7458,-38.7458,-35.7355,-20.5618,-59.3073,-46.1241,-59.3073,-59.3073,-28.7815,-58.4042,-24.1142,-62.8588,-49.6758,-62.8588,-62.8588,-32.3334,-52.8948,-62.2567,-27.1418,-65.8862,-52.7033,-65.8862,-65.8862,-35.3607,-55.9223,-59.4738,-65.5852,-24.1142,-62.8588,-49.6758,-62.8588,-62.8588,-32.3334,-52.8948,-56.4464,-59.4738,-62.2567 dDocent_Contig_2100 7 . C T 1143.73 . AB=0.496403;ABP=3.02592;AC=6;AF=0.5;AN=12;AO=69;CIGAR=1X3M1D1M2X;DP=139;DPB=130.25;DPRA=0;EPP=152.842;EPPR=152.842;GTI=0;LEN=1;MEANALT=1.16667;MQM=27;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2674;QR=2683;RO=69;RPL=0;RPP=152.842;RPPR=152.842;RPR=69;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=69;SRP=152.842;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:41:18,23:18:698:23:894:-43.2247,0,-50.8111 0|1:22:10,12:10:392:12:457:-22.384,0,-29.0161 0|1:26:13,13:13:507:13:504:-23.6954,0,-38.1505 0|1:23:11,11:11:433:11:427:-19.8208,0,-32.4268 0|1:12:7,5:7:272:5:197:-8.69544,0,-21.2347 0|1:15:10,5:10:381:5:195:-7.77436,0,-30.127 dDocent_Contig_2101 107 . N T 80.7036 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=80;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:46:-4.36869,-0.60206,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 dDocent_Contig_2102 13 . G A 3933.66 . AB=0.352403;ABP=85.7002;AC=6;AF=0.5;AN=12;AO=154;CIGAR=1X;DP=437;DPB=437;DPRA=0;EPP=337.417;EPPR=615.366;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.7273;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5942;QR=11237;RO=282;RPL=0;RPP=337.417;RPPR=615.366;RPR=154;RUN=1;SAF=154;SAP=337.417;SAR=0;SRF=282;SRP=615.366;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:62:46,16:46:1804:16:622:-37.6504,0,-143.896 0/1:89:57,31:57:2279:31:1186:-80.3375,0,-178.584 0/1:67:49,18:49:1957:18:713:-43.7694,0,-156.154 0/1:77:53,24:53:2111:24:926:-60.4676,0,-166.991 0/1:64:33,31:33:1313:31:1184:-87.5814,0,-99.1642 0/1:78:44,34:44:1773:34:1311:-94.782,0,-136.301 dDocent_Contig_2103 38 . G C 54869.8 . AB=0.592953;ABP=226.654;AC=6;AF=0.5;AN=12;AO=1767;CIGAR=1X;DP=2980;DPB=2980;DPRA=0;EPP=3840;EPPR=2634.83;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=0.999434;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=71119;QR=48273;RO=1212;RPL=0;RPP=3840;RPPR=2634.83;RPR=1767;RUN=1;SAF=1767;SAP=3840;SAR=0;SRF=1212;SRP=2634.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:442:157,285:157:6234:285:11521:-902.974,0,-427.756 0/1:555:152,402:152:6068:402:16204:-1289.81,0,-378.701 0/1:293:88,205:88:3527:205:8228:-651.832,0,-229.258 0/1:505:123,382:123:4884:382:15385:-1231.36,0,-287.427 0/1:657:423,234:423:16806:234:9406:-648.129,0,-1313.41 0/1:528:269,259:269:10754:259:10375:-774.102,0,-808.165 dDocent_Contig_2104 7 . C T 4595.06 . AB=0.194099;ABP=1049.88;AC=6;AF=0.5;AN=12;AO=250;CIGAR=1X;DP=1288;DPB=1288;DPRA=0;EPP=545.878;EPPR=2254.83;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=58.1109;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.955641;PAO=0;PQA=0;PQR=0;PRO=0;QA=9519;QR=39982;RO=1037;RPL=0;RPP=545.878;RPPR=2254.83;RPR=250;RUN=1;SAF=250;SAP=545.878;SAR=0;SRF=1037;SRP=2254.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:178:144,34:144:5559:34:1283:-62.1748,0,-443.626 0/1:210:183,27:183:7073:27:1033:-30.0615,0,-565.652 0/1:153:124,29:124:4797:29:1104:-53.6037,0,-365.625 0/1:230:179,51:179:6904:51:1928:-104.523,0,-536.88 0/1:248:179,69:179:6890:69:2636:-162.773,0,-529.296 0/1:269:228,40:228:8759:40:1535:-57.5912,0,-682.266 dDocent_Contig_2105 38 . C G 50692.1 . AB=0.602946;ABP=259.193;AC=6;AF=0.5;AN=12;AO=1678;CIGAR=1M2I4M1X5M;DP=2783;DPB=3146.82;DPRA=0;EPP=3646.74;EPPR=1655.5;GTI=0;LEN=1;MEANALT=10.3333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=64029;QR=29734;RO=761;RPL=0;RPP=3646.74;RPPR=1655.5;RPR=1678;RUN=1;SAF=1678;SAP=3646.74;SAR=0;SRF=761;SRP=1655.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:293:84,184,21:84:3293:184,21:6942,795:-543.538,0,-215.425,-503.659,-205.652,-768.138 0|1:637:273,306,45:273:10648:306,45:11461,1763:-856.228,0,-783.107,-793.445,-730.259,-1655.13 0|1:319:115,145,55:115:4490:145,55:5477,2139:-414.197,0,-325.451,-273.056,-193.344,-625.602 0|1:492:180,260,40:180:7056:260,40:9992,1586:-765.967,0,-501.973,-689.606,-449.695,-1257.8 1|0:422:43,310,59:43:1679:310,59:11917,2298:-1016.08,-50.8411,-95.5482,-840.167,0,-960.428 1|0:620:66,473,68:66:2568:473,68:18240,2649:-1484.42,-6.65777,-75.3035,-1286.61,0,-1477.16 dDocent_Contig_2106 38 . C G 289.348 . AB=0.0985663;ABP=784.055;AC=1;AF=0.0833333;AN=12;AO=74;CIGAR=1X;DP=3564;DPB=3564;DPRA=0.934541;EPP=163.699;EPPR=7579.28;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2964;QR=139056;RO=3489;RPL=0;RPP=163.699;RPPR=7579.28;RPR=74;RUN=1;SAF=74;SAP=163.699;SAR=0;SRF=3489;SRP=7579.28;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:583:583,0:583:23146:0:0:0,-175.5,-2081.13 0/0:723:722,0:722:28792:0:0:0,-217.344,-2588.33 0/0:348:348,0:348:13924:0:0:0,-104.758,-1252.11 0/0:775:775,0:775:30693:0:0:0,-233.298,-2759.62 0/0:577:558,19:558:22394:19:761:0,-104.882,-1944.65 0/1:558:503,55:503:20107:55:2203:-30.4577,0,-1639.95 dDocent_Contig_2107 27 . C T 417.232 . AB=0.198113;ABP=86.9193;AC=2;AF=0.166667;AN=12;AO=26;CIGAR=1X;DP=336;DPB=336;DPRA=0.833846;EPP=59.4686;EPPR=676.167;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1050;QR=12513;RO=310;RPL=0;RPP=59.4686;RPPR=676.167;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=310;SRP=676.167;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:40:27,13:27:1095:13:526:-35.6452,0,-86.7922 0/0:48:45,3:45:1805:3:122:0,-3.07695,-151.281 0/0:30:29,1:29:1178:1:41:0,-4.93633,-102.199 0/0:87:86,1:86:3484:1:41:0,-22.095,-309.484 0/1:66:58,8:58:2344:8:320:-9.29986,0,-191.241 0/0:65:65,0:65:2607:0:0:0,-19.5669,-234.756 dDocent_Contig_2108 7 . G T 112820 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=125;CIGAR=1X3M1X;DP=3608;DPB=3608;DPRA=0;EPP=274.444;EPPR=194.1;GTI=0;LEN=1;MEANALT=5.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3894;QR=2979;RO=88;RPL=0;RPP=274.444;RPPR=194.1;RPR=125;RUN=1;SAF=125;SAP=274.444;SAR=0;SRF=88;SRP=194.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:525:40,18,463:40:1357:18,463:567,17714:-1470.71,-1437.15,-1541.75,-29.3405,-93.7822,0 0|0:704:5,18,678:5:164:18,678:544,25675:-2293.83,-2251.8,-2259.63,-190.845,-160.586,0 0|0:298:8,19,270:8:287:19,270:595,10375:-907.091,-861.685,-879.369,-57.8579,-33.4723,0 0|0:412:0,12,396:0:0:12,396:370,15214:-1367.98,-1338.3,-1334.69,-119.208,-89.4953,0 0|0:901:22,32,841:22:754:32,841:1006,32089:-2817.41,-2743.14,-2794.71,-191.955,-172.285,0 0|0:768:13,26,722:13:417:26,722:812,27378:-2424.17,-2362.85,-2388.62,-183.744,-152.114,0 dDocent_Contig_2109 18 . C G 41158.9 . AB=0.0518617;ABP=1314.78;AC=1;AF=0.0833333;AN=12;AO=39;CIGAR=1X3M1X;DP=1419;DPB=1419;DPRA=1.06894;EPP=87.6977;EPPR=315.702;GTI=0;LEN=1;MEANALT=3.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.993056;PAO=0;PQA=0;PQR=0;PRO=0;QA=1547;QR=5750;RO=144;RPL=0;RPP=87.6977;RPPR=315.702;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=144;SRP=315.702;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:316:2,0,313:2:81:0,313:0,12467:-1113.45,-1114.05,-1120.73,-87.5333,-94.2224,0 0|0:367:75,2,289:75:2979:2,289:80,11560:-929.62,-945.607,-1190.24,0,-238.645,-158.237 0|0:198:21,0,177:21:831:0,177:0,7054:-574.918,-581.24,-649.629,0,-68.7846,-15.5022 0|0:224:20,13,190:20:809:13,190:512,7584:-618.544,-582.448,-645.237,0,-24.5951,-9.5117 0|0:153:9,0,144:9:362:0,144:0,5700:-479.859,-482.569,-512.402,-13.1134,-43.3483,0 1|0:161:17,24,118:17:688:24,118:955,4733:-406.721,-333.208,-382.71,-21.8978,0,-43.1054 dDocent_Contig_2110 107 . N T 124.484 . AB=0.2;ABP=6.91895;AC=6;AF=1;AN=6;AO=3;CIGAR=1X13M;DP=8;DPB=7.78571;DPRA=3.5;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=0;NS=3;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=87;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:5:0,2,1:0:0:2,1:62,23:-6.87358,-1.82222,-1.22016,-5.09668,0,-4.79565 1|1:1:0,0,0:0:0:0,0:0,0:0,0,0,0,0,0 1|1:2:0,0,2:0:0:0,2:0,64:-6.07866,-6.07866,-6.07866,-0.60206,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_2111 8 . A G 126.975 . AB=0.2;ABP=30.3709;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=130;DPB=130;DPRA=1.37662;EPP=20.3821;EPPR=267.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.92623;PAO=0;PQA=0;PQR=0;PRO=0;QA=310;QR=4649;RO=122;RPL=0;RPP=20.3821;RPPR=267.93;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=122;SRP=267.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:620:0:0:0,-4.81648,-56.1401 0/0:17:17,0:17:656:0:0:0,-5.11751,-59.3766 0/1:35:28,7:28:1063:7:271:-14.2204,0,-85.438 0/0:18:17,1:17:647:1:39:0,-1.52198,-54.6687 0/0:29:29,0:29:1105:0:0:0,-8.72987,-99.7509 0/0:15:15,0:15:558:0:0:0,-4.51545,-50.5556 dDocent_Contig_2113 117 . G A 3026.6 . AB=0.25;ABP=7.35324;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=4M1X3M3I2M;DP=112;DPB=147.2;DPRA=0.384615;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=6;MQM=60;MQMR=0;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0.25;PQA=1.75;PQR=28.25;PRO=1.25;QA=56;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:9:0,0,8,0:0:0:0,8,0:0,285,0:-25.6628,-25.6628,-25.6628,-2.40824,-2.40824,0,-25.6628,-25.6628,-2.40824,-25.6628 1|0:8:0,2,0,2:0:0:2,0,2:56,0,14:-5.11085,-0.633785,-0.0317245,-5.11085,-0.633785,-5.11085,-4.48248,0,-4.48248,-3.88042 0|0:12:0,0,12,0:0:0:0,12,0:0,428,0:-38.804,-38.804,-38.804,-3.61236,-3.61236,0,-38.804,-38.804,-3.61236,-38.804 0|0:22:0,0,21,0:0:0:0,21,0:0,732,0:-65.9179,-65.9179,-65.9179,-6.32163,-6.32163,0,-65.9179,-65.9179,-6.32163,-65.9179 0|0:26:0,0,23,0:0:0:0,23,0:0,721,0:-65.0285,-65.0285,-65.0285,-6.92369,-6.92369,0,-65.0285,-65.0285,-6.92369,-65.0285 0|0:35:0,0,33,0:0:0:0,33,0:0,1127,0:-101.388,-101.388,-101.388,-9.93399,-9.93399,0,-101.388,-101.388,-9.93399,-101.388 dDocent_Contig_2114 29 . T C 5721.29 . AB=0.17462;ABP=1756.68;AC=3;AF=0.25;AN=12;AO=442;CIGAR=1X;DP=3635;DPB=3635;DPRA=0;EPP=962.801;EPPR=6936.52;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999687;PAO=0;PQA=0;PQR=0;PRO=0;QA=16941;QR=124632;RO=3193;RPL=0;RPP=962.801;RPPR=6936.52;RPR=442;RUN=1;SAF=442;SAP=962.801;SAR=0;SRF=3193;SRP=6936.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:496:455,41:455:17694:41:1545:0,-10.0053,-1451.97 0/0:659:629,30:629:24512:30:1106:0,-98.5666,-2104.39 0/0:573:535,38:535:21064:38:1497:0,-37.5042,-1759.09 0/1:591:519,72:519:20229:72:2811:-75.2143,0,-1641.2 0/1:701:564,137:564:21977:137:5297:-265.628,0,-1765.25 0/1:615:491,124:491:19156:124:4685:-236.508,0,-1537.54 dDocent_Contig_2115 9 . T G 10422.9 . AB=0.0559006;ABP=1382.03;AC=0;AF=0;AN=12;AO=45;CIGAR=3X2M1X;DP=805;DPB=805;DPRA=0;EPP=100.727;EPPR=608.851;GTI=0;LEN=1;MEANALT=5.33333;MQM=45.6667;MQMR=60;NS=6;NUMALT=7;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1734;QR=10907;RO=279;RPL=0;RPP=100.727;RPPR=608.851;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=279;SRP=608.851;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:122:52,0,3,5,4,14,14,30:52:2034:0,3,5,4,14,14,30:0,119,195,161,564,563,1187:-82.0258,-97.6793,-264.909,-88.0341,-255.264,-254.361,-81.994,-249.223,-239.578,-247.718,-84.4097,-251.64,-241.994,-235.954,-250.435,-51.1933,-218.423,-208.778,-202.737,-205.154,-214.209,-51.2817,-218.512,-208.866,-202.826,-205.242,-172.026,-214.297,0,-167.228,-157.583,-151.542,-153.958,-120.742,-120.83,-158.197 0|0:128:72,0,2,7,1,16,0,30:72:2800:0,2,7,1,16,0,30:0,78,266,41,639,0,1200:-77.1775,-98.8516,-328.934,-92.44,-322.522,-321.92,-78.1619,-308.241,-301.83,-306.134,-95.4673,-325.55,-319.138,-304.857,-325.249,-46.2225,-276.305,-269.894,-255.613,-272.921,-271.489,-98.8516,-328.934,-322.522,-308.241,-325.55,-276.305,-328.934,0,-230.086,-223.674,-209.393,-226.701,-177.456,-230.086,-221.055 0|0:117:68,1,0,7,0,16,0,24:68:2669:1,0,7,0,16,0,24:40,0,276,0,640,0,969:-59.4183,-76.7809,-295.986,-79.8884,-296.287,-299.394,-57.7043,-274.101,-277.209,-275.102,-79.8884,-296.287,-299.394,-277.209,-299.394,-27.169,-243.568,-246.676,-224.491,-246.676,-241.86,-79.8884,-296.287,-299.394,-277.209,-299.394,-246.676,-299.394,0,-216.404,-219.511,-197.326,-219.511,-166.793,-219.511,-212.287 0|0:109:42,0,6,6,12,8,4,29:42:1648:0,6,6,12,8,4,29:0,227,238,477,322,162,1161:-82.9995,-95.6428,-231.176,-78.2097,-213.741,-211.935,-77.0339,-212.566,-195.132,-210.76,-56.3754,-191.909,-174.474,-173.299,-188.296,-69.1053,-204.639,-187.204,-186.029,-165.372,-202.231,-82.2838,-217.817,-200.383,-199.208,-178.55,-191.28,-216.613,0,-135.536,-118.102,-116.926,-96.2678,-108.998,-122.176,-126.806 0|0:176:29,0,6,11,0,0,9,121:29:1133:0,6,11,0,0,9,121:0,238,416,0,0,355,4886:-394.064,-402.794,-495.935,-383.527,-476.668,-474.862,-369.357,-462.496,-443.229,-459.185,-402.794,-495.935,-476.668,-462.496,-495.935,-402.794,-495.935,-476.668,-462.496,-495.935,-495.935,-373.59,-466.731,-447.464,-433.292,-466.731,-466.731,-464.021,0,-93.1455,-73.8779,-59.7094,-93.1455,-93.1455,-63.9399,-56.7209 0|0:153:16,9,10,9,0,0,0,109:16:623:9,10,9,0,0,0,109:351,389,343,0,0,0,4399:-357.823,-334.447,-382.939,-331.2,-354.209,-379.391,-335.395,-358.404,-355.157,-383.887,-362.64,-385.648,-382.401,-386.596,-413.841,-362.64,-385.648,-382.401,-386.596,-413.841,-413.841,-362.64,-385.648,-382.401,-386.596,-413.841,-413.841,-413.841,0,-23.0128,-19.7655,-23.9631,-51.2066,-51.2066,-51.2066,-18.3943 dDocent_Contig_2116 36 . T A 30432.6 . AB=0.742232;ABP=445.903;AC=8;AF=0.666667;AN=12;AO=954;CIGAR=1X;DP=1196;DPB=1196;DPRA=0;EPP=2074.59;EPPR=528.507;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997904;PAIREDR=0.991736;PAO=0;PQA=0;PQR=0;PRO=0;QA=37531;QR=9638;RO=242;RPL=0;RPP=2074.59;RPPR=528.507;RPR=954;RUN=1;SAF=954;SAP=2074.59;SAR=0;SRF=242;SRP=528.507;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:208:38,170:38:1496:170:6671:-537.513,0,-72.2645 0/1:198:41,157:41:1623:157:6223:-500.241,0,-86.6988 1/1:224:18,206:18:712:206:8068:-661.322,-3.02712,0 0/1:235:93,142:93:3738:142:5572:-430.596,0,-265.682 1/1:103:0,103:0:0:103:4058:-365.215,-31.0061,0 0/1:228:52,176:52:2069:176:6939:-555.594,0,-117.763 dDocent_Contig_2117 47 . T G 35519.1 . AB=0.351556;ABP=734.725;AC=6;AF=0.5;AN=12;AO=1344;CIGAR=1X;DP=3823;DPB=3823;DPRA=0;EPP=2921.47;EPPR=5377.4;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=1;PAIREDR=0.99798;PAO=0;PQA=0;PQR=0;PRO=0;QA=52405;QR=86227;RO=2475;RPL=0;RPP=2921.47;RPPR=5377.4;RPR=1344;RUN=1;SAF=1344;SAP=2921.47;SAR=0;SRF=2475;SRP=5377.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:732:521,210:521:18279:210:8207:-518.085,0,-1424.4 0/1:832:492,339:492:17170:339:13177:-934.797,0,-1294.55 0/1:617:459,158:459:15637:158:6157:-368.184,0,-1221.22 0/1:832:473,358:473:16522:358:14007:-1009.08,0,-1235.93 0/1:479:276,202:276:9667:202:7857:-562.542,0,-725.672 0/1:331:254,77:254:8952:77:3000:-170.452,0,-705.919 dDocent_Contig_2119 16 . C A 88063.1 . AB=0.585554;ABP=315.491;AC=6;AF=0.5;AN=12;AO=2878;CIGAR=1X;DP=4915;DPB=4915;DPRA=0;EPP=6252.51;EPPR=4424.13;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.9972;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=114518;QR=81829;RO=2036;RPL=0;RPP=6252.51;RPPR=4424.13;RPR=2878;RUN=1;SAF=2878;SAP=6252.51;SAR=0;SRF=2036;SRP=4424.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:681:206,475:206:8256:475:18956:-1499.46,0,-537.546 0/1:847:238,609:238:9537:609:24210:-1921.86,0,-602.737 0/1:485:151,334:151:6061:334:13325:-1052.24,0,-399.231 0/1:787:297,490:297:11954:490:19480:-1514.69,0,-838.06 0/1:1060:489,571:489:19690:571:22589:-1712.04,0,-1451.27 0/1:1055:655,399:655:26331:399:15958:-1117.25,0,-2049.65 dDocent_Contig_2120 40 . C T 104.462 . AB=0.155172;ABP=62.913;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=408;DPB=408;DPRA=0.990244;EPP=31.2394;EPPR=860.742;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.769231;PAIREDR=0.848101;PAO=0;PQA=0;PQR=0;PRO=0;QA=481;QR=15531;RO=395;RPL=0;RPP=31.2394;RPPR=860.742;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=395;SRP=860.742;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:58:49,9:49:1915:9:320:-11.6681,0,-155.108 0/0:74:74,0:74:2924:0:0:0,-22.2762,-263.275 0/0:61:59,2:59:2320:2:81:0,-10.6771,-201.287 0/0:84:82,2:82:3191:2:80:0,-17.6947,-279.692 0/0:49:49,0:49:1953:0:0:0,-14.7505,-175.976 0/0:82:82,0:82:3228:0:0:0,-24.6845,-290.613 dDocent_Contig_2121 12 . C A 15506 . AB=0.162602;ABP=1219.21;AC=7;AF=0.583333;AN=12;AO=200;CIGAR=1X4M1X;DP=1230;DPB=1230;DPRA=0;EPP=437.305;EPPR=1134.35;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7863;QR=20584;RO=521;RPL=0;RPP=437.305;RPPR=1134.35;RPR=200;RUN=1;SAF=200;SAP=437.305;SAR=0;SRF=521;SRP=1134.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:182:40,64,75:40:1554:64,75:2497,2904:-304.024,-110.821,-219.237,-77.563,0,-182.667 0|1:226:51,151,21:51:2020:151,21:5965,825:-475.491,0,-120.804,-422.996,-98.4126,-582.933 0|1:188:63,77,45:63:2498:77,45:3035,1774:-230.721,0,-182.441,-103.744,-59.6787,-295.817 0|1:183:58,86,39:58:2296:86,39:3402,1562:-262.51,0,-163.069,-151.291,-60.2791,-328.512 0|1:204:180,19,4:180:7095:19,4:741,160:-6.71412,0,-577.977,-47.7182,-570.517,-630.219 0|1:247:129,99,16:129:5121:99,16:3904,638:-282.366,0,-391.776,-268.658,-369.038,-685.414 dDocent_Contig_2122 38 . T C 8901.53 . AB=0.400253;ABP=71.4555;AC=2;AF=0.166667;AN=12;AO=323;CIGAR=1X;DP=1459;DPB=1459;DPRA=2.02422;EPP=704.396;EPPR=2467.63;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=12824;QR=45440;RO=1135;RPL=0;RPP=704.396;RPPR=2467.63;RPR=323;RUN=1;SAF=323;SAP=704.396;SAR=0;SRF=1135;SRP=2467.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:98:98,0:98:3927:0:0:0,-29.5009,-353.419 0/0:278:277,1:277:11096:1:38:0,-79.8891,-994.064 0/0:100:95,5:95:3789:5:204:0,-11.359,-322.273 0/0:191:191,0:191:7615:0:0:0,-57.4967,-684.954 0/1:435:251,183:251:10062:183:7305:-526.056,0,-773.87 0/1:357:223,134:223:8951:134:5277:-367.319,0,-697.569 dDocent_Contig_2123 7 . T G 14879.7 . AB=0.385159;ABP=35.4289;AC=4;AF=0.333333;AN=12;AO=109;CIGAR=2X;DP=655;DPB=655;DPRA=0;EPP=239.701;EPPR=283.13;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3517;QR=4948;RO=129;RPL=0;RPP=239.701;RPPR=283.13;RPR=109;RUN=1;SAF=109;SAP=239.701;SAR=0;SRF=129;SRP=283.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:59:0,22,36:0:0:22,36:713,1380:-170.957,-113.461,-106.839,-57.6535,0,-46.8164 1|0:119:7,39,72:7:268:39,72:1265,2738:-302.497,-202.569,-212.824,-80.0146,0,-80.3433 1|0:62:0,29,33:0:0:29,33:927,1276:-179.826,-105.196,-96.4664,-74.9802,0,-65.0462 1|0:43:9,19,15:9:346:19,15:612,573:-65.1982,-18.6047,-41.292,-20.8679,0,-44.7784 0|0:180:63,0,116:63:2416:0,116:0,4455:-346.773,-365.738,-564.039,0,-198.334,-163.415 0|0:192:50,0,142:50:1918:0,142:0,5464:-433.941,-448.993,-606.423,0,-157.814,-115.068 dDocent_Contig_2124 36 . T C 27733.3 . AB=0.36124;ABP=472.458;AC=6;AF=0.5;AN=12;AO=1014;CIGAR=1X;DP=2807;DPB=2807;DPRA=0;EPP=2204.88;EPPR=3894.29;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993862;PAO=0;PQA=0;PQR=0;PRO=0;QA=40349;QR=71122;RO=1792;RPL=0;RPP=2204.88;RPPR=3894.29;RPR=1014;RUN=1;SAF=1014;SAP=2204.88;SAR=0;SRF=1792;SRP=3894.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:221:84,137:84:3327:137:5487:-427.122,0,-232.952 0/1:292:129,163:129:5158:163:6538:-500.237,0,-376.177 0/1:227:86,141:86:3401:141:5589:-434.503,0,-237.815 0/1:342:68,273:68:2678:273:10839:-871.74,0,-138.103 0/1:1064:875,189:875:34596:189:7523:-356.399,0,-2790.23 0/1:661:550,111:550:21962:111:4373:-194.547,0,-1775.73 dDocent_Contig_2125 107 . N G 1369.79 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=44;CIGAR=1X;DP=44;DPB=44;DPRA=0;EPP=98.5551;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1496;QR=0;RO=0;RPL=0;RPP=98.5551;RPPR=0;RPR=44;RUN=1;SAF=0;SAP=98.5551;SAR=44;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:63:-5.98377,-0.60206,0 1/1:17:0,17:0:0:17:574:-51.9797,-5.11751,0 1/1:15:0,15:0:0:15:520:-47.1291,-4.51545,0 1/1:9:0,9:0:0:9:304:-27.6885,-2.70927,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_2126 98 . N A 95.4698 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=98;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 1/1:3:0,2:0:0:2:66:-6.04488,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_2127 28 . T A 462.774 . AB=0.180556;ABP=130.645;AC=2;AF=0.166667;AN=12;AO=26;CIGAR=1X;DP=296;DPB=296;DPRA=1.89474;EPP=59.4686;EPPR=589.308;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1024;QR=10750;RO=270;RPL=0;RPP=59.4686;RPPR=589.308;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=270;SRP=589.308;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1065:0:0:0,-8.12781,-96.1346 0/0:50:50,0:50:1989:0:0:0,-15.0515,-179.199 0/0:23:23,0:23:907:0:0:0,-6.92369,-81.9324 0/0:52:52,0:52:2064:0:0:0,-15.6536,-185.937 0/1:78:64,14:64:2552:14:541:-25.5465,0,-206.334 0/1:66:54,12:54:2173:12:483:-23.9527,0,-175.873 dDocent_Contig_2128 19 . G A 24947.9 . AB=0.542498;ABP=24.2355;AC=7;AF=0.583333;AN=12;AO=816;CIGAR=1X1M1X;DP=1435;DPB=1435;DPRA=0;EPP=1774.93;EPPR=1336.29;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=32347;QR=23597;RO=614;RPL=0;RPP=1774.93;RPPR=1336.29;RPR=816;RUN=1;SAF=816;SAP=1774.93;SAR=0;SRF=614;SRP=1336.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:82:0,82:0:0:82:3239:-291.583,-24.6845,0 0|1:126:18,108:18:691:108:4276:-346.898,0,-24.5903 0|1:56:15,41:15:564:41:1617:-128.918,0,-34.2327 0|1:134:16,118:16:601:118:4660:-378.997,0,-14.08 0|1:612:368,241:368:14123:241:9598:-679.7,0,-1086.78 0|1:425:197,226:197:7618:226:8957:-677.912,0,-557.643 dDocent_Contig_2129 7 . T C 2884.19 . AB=0.145305;ABP=1597.35;AC=3;AF=0.25;AN=12;AO=264;CIGAR=1X3M1X;DP=3308;DPB=3308;DPRA=0.90766;EPP=576.279;EPPR=6595.6;GTI=0;LEN=1;MEANALT=2;MQM=57.3636;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10172;QR=116568;RO=3036;RPL=0;RPP=576.279;RPPR=6595.6;RPR=264;RUN=1;SAF=264;SAP=576.279;SAR=0;SRF=3036;SRP=6595.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:358:325,33:325:12482:33:1283:-6.03767,0,-1015.08 0|1:724:609,115:609:23406:115:4427:-180.201,0,-1887.26 0|1:377:311,64:311:11926:64:2465:-107.403,0,-959.709 0|0:674:620,52:620:23831:52:1997:0,-22.8228,-1963.73 0|0:486:484,0:484:18546:0:0:0,-145.699,-1667.77 0|0:689:687,0:687:26377:0:0:0,-206.808,-2372.19 dDocent_Contig_2130 98 . N A 47.5083 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=50;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:50:-4.74974,-0.60206,0 dDocent_Contig_2131 14 . T C 97422.6 . AB=0.902062;ABP=547.804;AC=11;AF=0.916667;AN=12;AO=2799;CIGAR=1X;DP=2894;DPB=2894;DPRA=0;EPP=6080.96;EPPR=207.129;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999643;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=111927;QR=3785;RO=94;RPL=0;RPP=6080.96;RPPR=207.129;RPR=2799;RUN=1;SAF=2799;SAP=6080.96;SAR=0;SRF=94;SRP=207.129;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:391:19,372:19:765:372:14909:-1271.46,-48.5313,0 1/1:674:31,643:31:1242:643:25704:-2198.98,-90.8469,0 0/1:388:38,350:38:1532:350:13948:-1137.46,0,-21.3186 1/1:484:6,477:6:246:477:19085:-1693.54,-123.261,0 1/1:549:0,549:0:0:549:21930:-1971.78,-165.265,0 1/1:408:0,408:0:0:408:16351:-1470.26,-122.82,0 dDocent_Contig_2132 37 . A T 9678.71 . AB=0.245209;ABP=1003.33;AC=6;AF=0.5;AN=12;AO=435;CIGAR=1X;DP=1774;DPB=1774;DPRA=0;EPP=947.601;EPPR=2908.44;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997758;PAO=0;PQA=0;PQR=0;PRO=0;QA=16804;QR=51451;RO=1338;RPL=0;RPP=947.601;RPPR=2908.44;RPR=435;RUN=1;SAF=435;SAP=947.601;SAR=0;SRF=1338;SRP=2908.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:234:183,51:183:7038:51:1959:-106.089,0,-562.792 0/1:333:261,72:261:10011:72:2811:-152.874,0,-800.331 0/1:266:195,70:195:7500:70:2698:-162.819,0,-594.602 0/1:372:295,77:295:11253:77:2947:-153.383,0,-900.252 0/1:273:181,92:181:7035:92:3560:-238.295,0,-550.744 0/1:296:223,73:223:8614:73:2829:-165.634,0,-685.799 dDocent_Contig_2133 10 . C T 13607.6 . AB=0.807829;ABP=465.573;AC=6;AF=0.5;AN=12;AO=454;CIGAR=1X;DP=562;DPB=562;DPRA=0;EPP=988.859;EPPR=237.529;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=56.3704;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.972222;PAO=0;PQA=0;PQR=0;PRO=0;QA=17109;QR=4293;RO=108;RPL=0;RPP=988.859;RPPR=237.529;RPR=454;RUN=1;SAF=454;SAP=988.859;SAR=0;SRF=108;SRP=237.529;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:96:28,68:28:1132:68:2543:-200.168,0,-72.675 0/1:89:19,70:19:721:70:2639:-210.917,0,-36.9482 0/1:77:15,62:15:600:62:2361:-189.52,0,-31.1052 0/1:122:11,111:11:436:111:4201:-341.455,0,-2.65377 0/1:68:6,62:6:243:62:2293:-186.118,0,-1.77756 0/1:110:29,81:29:1161:81:3072:-243.522,0,-71.5252 dDocent_Contig_2134 18 . C G 3401.22 . AB=0.0227273;ABP=786.517;AC=6;AF=0.5;AN=12;AO=9;CIGAR=1X2M1X3M1X1M1X5M;DP=761;DPB=758.733;DPRA=0;EPP=22.5536;EPPR=1236.41;GTI=0;LEN=1;MEANALT=5.66667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.975352;PAO=0;PQA=0;PQR=0;PRO=0;QA=359;QR=22335;RO=568;RPL=0;RPP=22.5536;RPPR=1236.41;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=568;SRP=1236.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:123:107,0,13,0:107:4179:0,13,0:0,526,0:-11.1607,-43.3709,-386.894,0,-343.522,-339.609,-43.3709,-386.894,-343.522,-386.894 0|1:156:113,0,37,2:113:4449:0,37,2:0,1452,80:-85.435,-119.451,-485.452,0,-366.042,-354.904,-112.861,-478.861,-359.452,-478.259 0|1:100:69,3,20,5:69:2724:3,20,5:121,794,199:-44.6263,-55.4208,-278.672,0,-214.208,-218.162,-49.0076,-263.188,-207.796,-271.658 0|1:140:115,8,13,2:115:4519:8,13,2:313,521,80:-8.31071,-17.1999,-386.474,0,-345.957,-367.775,-36.3387,-382.292,-365.099,-407.422 0|1:119:76,0,42,0:76:2978:0,42,0:0,1658,0:-113.747,-136.625,-381.513,0,-245.095,-232.452,-136.625,-381.513,-245.095,-381.513 0|1:123:88,0,35,0:88:3486:0,35,0:0,1387,0:-88.0644,-114.555,-401.482,0,-287.323,-276.787,-114.555,-401.482,-287.323,-401.482 dDocent_Contig_2135 17 . G A 19375.3 . AB=0.31744;ABP=676.932;AC=6;AF=0.5;AN=12;AO=739;CIGAR=1X;DP=2328;DPB=2328;DPRA=0;EPP=1607.73;EPPR=3449.14;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.890392;PAIREDR=0.99937;PAO=0;PQA=0;PQR=0;PRO=0;QA=29445;QR=63252;RO=1587;RPL=0;RPP=1607.73;RPPR=3449.14;RPR=739;RUN=1;SAF=739;SAP=1607.73;SAR=0;SRF=1587;SRP=3449.14;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:367:289,78:289:11486:78:3102:-168.79,0,-922.493 0/1:547:333,214:333:13281:214:8483:-598.359,0,-1029.66 0/1:274:152,121:152:6073:121:4838:-352.766,0,-463.775 0/1:399:290,109:290:11503:109:4361:-272.332,0,-914.366 0/1:387:285,102:285:11374:102:4044:-247.45,0,-906.391 0/1:354:238,115:238:9535:115:4617:-309.056,0,-751.165 dDocent_Contig_2136 106 . N A 730.636 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=21;CIGAR=3X17I2M;DP=21;DPB=92.4;DPRA=0;EPP=48.6112;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=779;QR=0;RO=0;RPL=0;RPP=48.6112;RPPR=0;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:4:0,4:0:0:4:151:-13.9579,-1.20412,0 1|1:3:0,3:0:0:3:111:-10.3538,-0.90309,0 1|1:2:0,2:0:0:2:72:-6.83637,-0.60206,0 1|1:7:0,7:0:0:7:260:-23.7569,-2.10721,0 1|1:4:0,4:0:0:4:148:-13.6819,-1.20412,0 1|1:1:0,1:0:0:1:37:-3.69783,-0.30103,0 dDocent_Contig_2137 61 . G A 83331.7 . AB=0.83992;ABP=1501.41;AC=9;AF=0.75;AN=12;AO=2591;CIGAR=1X;DP=2868;DPB=2868;DPRA=0;EPP=5629.3;EPPR=600.165;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=99236;QR=10970;RO=275;RPL=2591;RPP=5629.3;RPPR=600.165;RPR=0;RUN=1;SAF=2591;SAP=5629.3;SAR=0;SRF=275;SRP=600.165;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:515:81,433:81:3257:433:16429:-1322.81,0,-138.375 0/1:543:109,433:109:4304:433:16550:-1324.91,0,-223.77 0/1:435:47,388:47:1890:388:15006:-1218.65,0,-39.3486 1/1:511:29,482:29:1162:482:18407:-1550.6,-48.9666,0 1/1:358:0,358:0:0:358:13657:-1228.37,-107.769,0 1/1:506:9,497:9:357:497:19187:-1693.05,-119.833,0 dDocent_Contig_2138 14 . C G 1752.56 . AB=0.428571;ABP=9.52472;AC=3;AF=0.25;AN=12;AO=63;CIGAR=1X;DP=226;DPB=226;DPRA=1.86076;EPP=139.813;EPPR=356.96;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8528;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.993865;PAO=0;PQA=0;PQR=0;PRO=0;QA=2483;QR=6579;RO=163;RPL=0;RPP=139.813;RPPR=356.96;RPR=63;RUN=1;SAF=63;SAP=139.813;SAR=0;SRF=163;SRP=356.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1420:0:0:0,-10.536,-128.047 0/0:18:18,0:18:728:0:0:0,-5.41854,-65.8441 0/0:26:26,0:26:1039:0:0:0,-7.82678,-93.7958 0/1:27:24,3:24:966:3:105:-1.66197,0,-78.7418 0/1:56:20,36:20:814:36:1424:-111.557,0,-56.7164 0/1:64:40,24:40:1612:24:954:-66.8894,0,-126.043 dDocent_Contig_2139 33 . G T 286.225 . AB=0.0246914;ABP=161.957;AC=0;AF=0;AN=12;AO=6;CIGAR=2M1X14M;DP=411;DPB=396.824;DPRA=0.962963;EPP=16.0391;EPPR=754.34;GTI=0;LEN=1;MEANALT=4.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.99422;PAO=0;PQA=0;PQR=0;PRO=0;QA=218;QR=13573;RO=346;RPL=0;RPP=16.0391;RPPR=754.34;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=346;SRP=754.34;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:75:66,4,4,1:66:2573:4,4,1:152,137,41:0,-7.39243,-217.705,-8.77411,-207.799,-219.059,-16.4785,-215.525,-216.879,-227.688 0|0:81:65,0,2,10:65:2561:0,2,10:0,81,408:-14.1184,-33.6854,-244.379,-27.0047,-237.7,-237.098,0,-210.714,-204.035,-207.704 0|0:45:35,2,0,7:35:1359:2,0,7:64,0,273:-11.9277,-17.3243,-128.379,-22.4638,-128.981,-134.132,0,-106.545,-111.696,-109.588 0|0:48:42,0,0,6:42:1640:0,0,6:0,0,243:-7.79816,-20.4414,-155.243,-20.4414,-155.243,-155.243,0,-135.204,-135.204,-133.398 0|0:96:80,7,0,4:80:3152:7,0,4:269,0,162:0,-2.00592,-259.213,-24.0824,-261.32,-283.401,-10.7195,-247.961,-270.042,-268.838 0|0:66:58,4,0,2:58:2288:4,0,2:156,0,82:0,-4.60582,-191.717,-17.4597,-192.921,-205.743,-10.6746,-186.152,-198.975,-198.373 dDocent_Contig_2140 170 . C T 36.2715 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=2;CIGAR=1X3M1X;DP=97;DPB=97;DPRA=1.83099;EPP=7.35324;EPPR=139.813;GTI=0;LEN=1;MEANALT=3;MQM=6;MQMR=6.88889;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=80;QR=2428;RO=63;RPL=0;RPP=7.35324;RPPR=139.813;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=139.813;SRR=63;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:13:13,0,0:13:506:0,0:0,0:0,-3.91339,-8.25724,-3.91339,-8.25724,-8.25724 0|0:14:9,0,5:9:338:0,5:0,192:0,-2.70927,-5.66002,-1.08754,-4.10693,-2.60178 0|0:11:3,0,8:3:115:0,8:0,318:-3.14934,-4.05243,-5.03864,-1.35205,-2.40824,0 0|0:14:9,0,5:9:350:0,5:0,198:0,-2.70927,-5.66796,-0.995304,-4.02397,-2.51882 0|0:26:15,2,8:15:585:2,8:80,311:0,-4.03956,-7.91716,-1.88055,-5.88813,-3.95683 0|0:19:14,0,5:14:534:0,5:0,193:0,-4.21442,-8.63499,-2.50071,-6.99087,-5.48572 dDocent_Contig_2141 98 . N C 100.497 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=101;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 dDocent_Contig_2142 8 . A T 2188.9 . AB=0.18626;ABP=563.021;AC=2;AF=0.166667;AN=12;AO=164;CIGAR=1X;DP=2107;DPB=2107;DPRA=0.632806;EPP=359.132;EPPR=4222.18;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9974;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998456;PAO=0;PQA=0;PQR=0;PRO=0;QA=6255;QR=73793;RO=1943;RPL=0;RPP=359.132;RPPR=4222.18;RPR=164;RUN=1;SAF=164;SAP=359.132;SAR=0;SRF=1943;SRP=4222.18;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:304:279,25:279:10665:25:943:0,-6.33265,-874.288 0/1:386:299,87:299:11370:87:3313:-182.114,0,-906.677 0/1:269:234,35:234:8839:35:1341:-39.9986,0,-714.303 0/0:301:286,15:286:10800:15:581:0,-37.977,-918.997 0/0:506:506,0:506:19248:0:0:0,-152.321,-1731.33 0/0:341:339,2:339:12871:2:77:0,-95.3421,-1150.56 dDocent_Contig_2143 76 . T C 840.593 . AB=0.192171;ABP=234.291;AC=3;AF=0.25;AN=12;AO=54;CIGAR=1X;DP=644;DPB=644;DPRA=0.774105;EPP=120.27;EPPR=1282.01;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1921;QR=20101;RO=589;RPL=54;RPP=120.27;RPPR=1282.01;RPR=0;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=589;SRP=1282.01;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:97:71,26:71:2316:26:876:-49.9393,0,-179.493 0/1:136:121,15:121:4065:15:553:-9.16979,0,-325.116 0/1:48:35,13:35:1233:13:492:-30.1721,0,-96.811 0/0:112:112,0:112:3906:0:0:0,-33.7154,-351.695 0/0:128:127,0:127:4377:0:0:0,-38.2308,-393.961 0/0:123:123,0:123:4204:0:0:0,-37.0267,-378.486 dDocent_Contig_2144 21 . G C 400.17 . AB=0.0963455;ABP=1280.98;AC=1;AF=0.0833333;AN=12;AO=129;CIGAR=1X;DP=5577;DPB=5577;DPRA=0.900552;EPP=283.13;EPPR=11818;GTI=0;LEN=1;MEANALT=2.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999816;PAO=0;PQA=0;PQR=0;PRO=0;QA=5164;QR=215284;RO=5441;RPL=0;RPP=283.13;RPPR=11818;RPR=129;RUN=1;SAF=129;SAP=283.13;SAR=0;SRF=5441;SRP=11818;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:743:732,10:732:28989:10:406:0,-186.864,-2569.55 0/1:903:814,87:814:32135:87:3478:-41.5399,0,-2617.83 0/0:805:805,0:805:31954:0:0:0,-242.329,-2872.98 0/0:942:911,31:911:36056:31:1253:0,-170.532,-3128.75 0/0:1186:1185,0:1185:46968:0:0:0,-356.721,-4222.33 0/0:998:994,1:994:39182:1:27:0,-297.122,-3520.11 dDocent_Contig_2145 13 . C T 61.2789 . AB=0.166667;ABP=26.1727;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=166;DPB=166;DPRA=0.721311;EPP=13.8677;EPPR=352.617;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=202;QR=6305;RO=161;RPL=0;RPP=13.8677;RPPR=352.617;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=161;SRP=352.617;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:745:0:0:0,-5.71957,-67.375 0/0:27:27,0:27:1074:0:0:0,-8.12781,-96.9533 0/0:44:44,0:44:1717:0:0:0,-13.2453,-154.77 0/1:24:20,4:20:785:4:161:-7.65076,0,-63.7488 0/0:32:32,0:32:1240:0:0:0,-9.63296,-111.868 0/0:20:19,1:19:744:1:41:0,-1.92603,-63.1871 dDocent_Contig_2146 110 . A T 235.015 . AB=0.375;ABP=6.26751;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1M1D1X2M1X;DP=167;DPB=165.333;DPRA=0.904348;EPP=24.725;EPPR=343.931;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.9;PAIREDR=0.726115;PAO=0;PQA=0;PQR=0;PRO=0;QA=392;QR=6219;RO=157;RPL=0;RPP=24.725;RPPR=343.931;RPR=10;RUN=1;SAF=0;SAP=24.725;SAR=10;SRF=0;SRP=343.931;SRR=157;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:24:15,9:15:597:9:351:-24.7234,0,-46.8461 0|0:28:27,1:27:1073:1:41:0,-4.33427,-92.7658 0|0:32:32,0:32:1279:0:0:0,-9.63296,-115.381 0|0:33:33,0:33:1301:0:0:0,-9.93399,-117.363 0|0:21:21,0:21:831:0:0:0,-6.32163,-75.1069 0|0:29:29,0:29:1138:0:0:0,-8.72987,-102.711 dDocent_Contig_2147 78 . G A 93438 . AB=0.772304;ABP=2147.07;AC=10;AF=0.833333;AN=12;AO=3006;CIGAR=1X1M;DP=3830;DPB=3830;DPRA=0;EPP=6530.46;EPPR=1058.35;GTI=0;LEN=1;MEANALT=2.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.999002;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=108016;QR=17357;RO=486;RPL=3006;RPP=6530.46;RPPR=1058.35;RPR=0;RUN=1;SAF=3006;SAP=6530.46;SAR=0;SRF=486;SRP=1058.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:501:34,31,435:34:1174:31,435:1063,15613:-1298.7,-1222.64,-1308.69,-35.562,-44.6547,0 1|1:703:26,75,602:26:881:75,602:2595,21800:-1911.14,-1708.11,-1756.96,-139.437,0,-29.6448 1|1:491:27,77,385:27:978:77,385:2696,13497:-1229.49,-1018.29,-1074.95,-139.484,0,-103.434 1|1:743:17,147,578:17:615:147,578:5209,20787:-2064.59,-1645.43,-1651.38,-374.076,0,-250.283 0|1:695:198,0,495:198:7031:0,495:0,17759:-1388.94,-1448.55,-2021.4,0,-573.136,-424.126 0|1:697:184,1,511:184:6678:1,511:39,18560:-1460.16,-1512.34,-2057.3,0,-542.15,-391.529 dDocent_Contig_2148 77 . C A 87978.7 . AB=0.829421;ABP=605.317;AC=10;AF=0.833333;AN=12;AO=2606;CIGAR=1X;DP=2781;DPB=2781;DPRA=0;EPP=5661.87;EPPR=380.846;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.986186;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=102621;QR=6912;RO=174;RPL=2606;RPP=5661.87;RPPR=380.846;RPR=0;RUN=1;SAF=2606;SAP=5661.87;SAR=0;SRF=174;SRP=380.846;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:365:54,311:54:2119:311:12367:-1002.3,0,-81.0076 1/1:427:29,398:29:1164:398:15666:-1303.77,-23.5032,0 0/1:274:55,219:55:2200:219:8702:-700.212,0,-115.688 1/1:348:24,324:24:948:324:12763:-1062.18,-19.1358,0 1/1:742:0,741:0:0:741:28961:-2603.68,-223.063,0 1/1:625:12,613:12:481:613:24162:-2128.95,-144.502,0 dDocent_Contig_2149 106 . N C 1318.67 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=44;CIGAR=2X;DP=44;DPB=44;DPRA=0;EPP=98.5551;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1455;QR=0;RO=0;RPL=0;RPP=98.5551;RPPR=0;RPR=44;RUN=1;SAF=0;SAP=98.5551;SAR=44;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:11:0,11:0:0:11:355:-32.2626,-3.31133,0 1|1:33:0,33:0:0:33:1100:-99.303,-9.93399,0 dDocent_Contig_2150 27 . T A 108463 . AB=0.907273;ABP=1587.82;AC=10;AF=0.833333;AN=12;AO=3154;CIGAR=1X;DP=3283;DPB=3283;DPRA=0;EPP=6851.83;EPPR=280.959;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999366;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=125392;QR=5112;RO=128;RPL=0;RPP=6851.83;RPPR=280.959;RPR=3154;RUN=1;SAF=3154;SAP=6851.83;SAR=0;SRF=128;SRP=280.959;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:457:8,448:8:319:448:17775:-1569.27,-108.603,0 0/1:553:53,500:53:2109:500:19946:-1627.04,0,-23.5127 1/1:466:5,461:5:202:461:18325:-1629.17,-121.718,0 0/1:547:49,498:49:1968:498:19862:-1621.28,0,-12.6511 1/1:670:0,670:0:0:670:26639:-2395.18,-201.69,0 1/1:590:13,577:13:514:577:22845:-2007.56,-131.001,0 dDocent_Contig_2151 115 . T C 20628.1 . AB=0.857143;ABP=507.102;AC=9;AF=0.75;AN=12;AO=734;CIGAR=1X;DP=813;DPB=813;DPRA=0;EPP=1596.87;EPPR=174.557;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=24973;QR=2660;RO=79;RPL=0;RPP=1596.87;RPPR=174.557;RPR=734;RUN=1;SAF=0;SAP=1596.87;SAR=734;SRF=0;SRP=174.557;SRR=79;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:161:14,147:14:483:147:4956:-402.419,-4.66672,0 0/1:195:27,168:27:881:168:5759:-459.763,0,-20.8896 0/1:124:16,108:16:546:108:3694:-295.353,0,-12.1364 0/1:136:22,114:22:750:114:3886:-309.013,0,-26.8778 1/1:99:0,99:0:0:99:3373:-303.803,-29.802,0 1/1:98:0,98:0:0:98:3305:-297.684,-29.5009,0 dDocent_Contig_2152 1 . N G 115.173 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=116;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:75:-7.1201,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_2153 106 . N C 804.098 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=25;CIGAR=2X;DP=25;DPB=25;DPRA=0;EPP=57.2971;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=866;QR=0;RO=0;RPL=0;RPP=57.2971;RPPR=0;RPR=25;RUN=1;SAF=0;SAP=57.2971;SAR=25;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 1|1:13:0,13:0:0:13:450:-40.8312,-3.91339,0 1|1:8:0,8:0:0:8:279:-25.449,-2.40824,0 1|1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 .:.:.:.:.:.:.:. 1|1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 dDocent_Contig_2154 25 . C T 2063.13 . AB=0.180095;ABP=565.689;AC=5;AF=0.416667;AN=12;AO=117;CIGAR=1X;DP=699;DPB=699;DPRA=0;EPP=257.073;EPPR=1266.81;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.984536;PAO=0;PQA=0;PQR=0;PRO=0;QA=4615;QR=23216;RO=582;RPL=0;RPP=257.073;RPPR=1266.81;RPR=117;RUN=1;SAF=117;SAP=257.073;SAR=0;SRF=582;SRP=1266.81;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:75:46,29:46:1844:29:1133:-79.6673,0,-143.593 0/1:53:45,8:45:1781:8:325:-13.665,0,-144.557 0/1:139:118,21:118:4710:21:834:-33.5332,0,-381.969 0/0:66:63,3:63:2504:3:120:0,-8.68067,-214.321 0/1:217:178,39:178:7097:39:1538:-73.3448,0,-573.069 0/1:149:132,17:132:5280:17:665:-15.3243,0,-430.204 dDocent_Contig_2155 81 . G T 25537.7 . AB=0.853383;ABP=291.539;AC=10;AF=0.833333;AN=12;AO=867;CIGAR=1X4M;DP=946;DPB=946;DPRA=0;EPP=1885.68;EPPR=118.098;GTI=0;LEN=1;MEANALT=2.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.989619;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=29944;QR=1757;RO=53;RPL=867;RPP=1885.68;RPPR=118.098;RPR=0;RUN=1;SAF=867;SAP=1885.68;SAR=0;SRF=53;SRP=118.098;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:133:13,0,120:13:420:0,120:0,4106:-331.64,-335.553,-369.427,-1.92475,-36.1236,0 0|1:174:22,0,147:22:736:0,147:0,5066:-404.901,-411.524,-471.119,0,-59.5874,-15.3359 0|1:92:11,1,80:11:368:1,80:35,2798:-224.32,-224.784,-254.279,0,-26.9345,-5.70116 1|1:130:7,10,107:7:233:10,107:332,3735:-315.058,-290.307,-306.153,-13.3539,-5.35203,0 1|1:190:0,0,188:0:0:0,188:0,6469:-581.982,-581.982,-581.982,-56.5936,-56.5936,0 1|1:227:0,0,225:0:0:0,225:0,7770:-699.089,-699.089,-699.089,-67.7318,-67.7318,0 dDocent_Contig_2156 19 . T G 79.5749 . AB=0.121212;ABP=85.263;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=388;DPB=388;DPRA=1.29586;EPP=35.5824;EPPR=812.97;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.873995;PAO=0;PQA=0;PQR=0;PRO=0;QA=602;QR=14854;RO=373;RPL=0;RPP=35.5824;RPPR=812.97;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=373;SRP=812.97;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:62:59,3:59:2344:3:121:0,-7.38366,-199.849 0/1:66:58,8:58:2301:8:322:-9.48037,0,-187.397 0/0:68:68,0:68:2727:0:0:0,-20.47,-245.545 0/0:91:87,4:87:3447:4:159:0,-12.7018,-295.6 0/0:34:34,0:34:1353:0:0:0,-10.235,-122.028 0/0:67:67,0:67:2682:0:0:0,-20.169,-241.495 dDocent_Contig_2157 28 . T G 21988.5 . AB=0.803545;ABP=544.823;AC=8;AF=0.666667;AN=12;AO=686;CIGAR=1X;DP=828;DPB=828;DPRA=0;EPP=1492.64;EPPR=307.016;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=27130;QR=5545;RO=140;RPL=0;RPP=1492.64;RPPR=307.016;RPR=686;RUN=1;SAF=686;SAP=1492.64;SAR=0;SRF=140;SRP=307.016;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:125:9,116:9:347:116:4550:-377.853,-6.04387,0 0/1:266:55,211:55:2162:211:8347:-670.71,0,-114.69 0/1:182:17,165:17:675:165:6523:-532.012,0,-6.29225 0/1:216:57,158:57:2281:158:6268:-499.057,0,-140.632 1/1:26:0,26:0:0:26:1051:-94.8803,-7.82678,0 0/1:13:2,10:2:80:10:391:-31.5596,0,-3.59951 dDocent_Contig_2158 11 . A C 269.834 . AB=0.108753;ABP=504.263;AC=4;AF=0.333333;AN=12;AO=41;CIGAR=1X;DP=747;DPB=747;DPRA=0.509459;EPP=92.0407;EPPR=1536.07;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997167;PAO=0;PQA=0;PQR=0;PRO=0;QA=1625;QR=27326;RO=706;RPL=0;RPP=92.0407;RPPR=1536.07;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=706;SRP=1536.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:86:78,8:78:3039:8:315:-2.82663,0,-247.755 0/1:125:113,12:113:4390:12:473:-5.29217,0,-357.486 0/1:60:51,9:51:1963:9:360:-14.7024,0,-158.835 0/1:106:94,12:94:3644:12:477:-11.3734,0,-296.131 0/0:210:210,0:210:8096:0:0:0,-63.2163,-728.383 0/0:160:160,0:160:6194:0:0:0,-48.1648,-557.35 dDocent_Contig_2159 67 . T C 4263.92 . AB=0.121336;ABP=4252.44;AC=4;AF=0.333333;AN=12;AO=416;CIGAR=1X;DP=5492;DPB=5492;DPRA=0;EPP=906.343;EPPR=11014.5;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=59.9949;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998817;PAO=0;PQA=0;PQR=0;PRO=0;QA=16274;QR=185287;RO=5071;RPL=416;RPP=906.343;RPPR=11014.5;RPR=0;RUN=1;SAF=416;SAP=906.343;SAR=0;SRF=5071;SRP=11014.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:818:690,128:690:25206:128:5044:-207.601,0,-2021.03 0/1:1032:920,110:920:33758:110:4260:-73.1379,0,-2726.13 0/1:734:647,87:647:23933:87:3453:-89.8648,0,-1931.79 0/1:828:739,89:739:26852:89:3469:-63.0109,0,-2165.41 0/0:1088:1085,1:1085:39160:1:8:0,-326.214,-3521.54 0/0:992:990,1:990:36378:1:40:0,-294.565,-3268.21 dDocent_Contig_2160 23 . T C 7315.41 . AB=0.172609;ABP=2144.3;AC=6;AF=0.5;AN=12;AO=397;CIGAR=1X;DP=2300;DPB=2300;DPRA=0;EPP=865.085;EPPR=4133.15;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=15936;QR=76208;RO=1902;RPL=0;RPP=865.085;RPPR=4133.15;RPR=397;RUN=1;SAF=397;SAP=865.085;SAR=0;SRF=1902;SRP=4133.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:271:203,68:203:8058:68:2728:-164.058,0,-643.192 0/1:398:327,71:327:13152:71:2863:-137.955,0,-1062.85 0/1:451:368,82:368:14786:82:3309:-162.277,0,-1193.99 0/1:336:269,67:269:10739:67:2676:-139.812,0,-864.634 0/1:439:401,38:401:16022:38:1541:-6.7699,0,-1308.53 0/1:405:334,71:334:13451:71:2819:-131.891,0,-1087.6 dDocent_Contig_2161 59 . T A 1731.2 . AB=0.75;ABP=44.2683;AC=3;AF=0.25;AN=12;AO=59;CIGAR=1X;DP=336;DPB=336;DPRA=0.297778;EPP=131.127;EPPR=602.337;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2283;QR=10993;RO=276;RPL=59;RPP=131.127;RPPR=602.337;RPR=0;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=276;SRP=602.337;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:13,1:13:526:1:40:0,-0.218741,-43.6919 0/1:23:6,17:6:242:17:672:-53.8881,0,-15.2338 0/1:42:7,35:7:278:35:1362:-110.207,0,-12.7457 0/1:11:6,5:6:239:5:191:-14.2466,0,-18.5736 0/0:135:134,0:134:5308:0:0:0,-40.338,-477.173 0/0:111:110,1:110:4400:1:18:0,-31.6144,-394.141 dDocent_Contig_2162 151 . G A 66.7048 . AB=0.235294;ABP=13.3567;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=142;DPB=142;DPRA=0.945205;EPP=18.2106;EPPR=296.159;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.571429;PAIREDR=0.711111;PAO=0;PQA=0;PQR=0;PRO=0;QA=214;QR=5387;RO=135;RPL=0;RPP=18.2106;RPPR=296.159;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=296.159;SRR=135;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:1050:0:0:0,-7.82678,-94.7904 0/0:29:27,2:27:1080:2:39:0,-5.02539,-93.7836 0/1:17:13,4:13:517:4:144:-8.19335,0,-41.7567 0/0:23:22,1:22:892:1:31:0,-3.82424,-77.4872 0/0:25:25,0:25:999:0:0:0,-7.52575,-90.204 0/0:22:22,0:22:849:0:0:0,-6.62266,-76.71 dDocent_Contig_2163 14 . T C 38.7552 . AB=0.0964912;ABP=164.233;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=815;DPB=815;DPRA=0.772109;EPP=31.2394;EPPR=1744.53;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.692308;PAIREDR=0.88404;PAO=0;PQA=0;PQR=0;PRO=0;QA=484;QR=29773;RO=802;RPL=0;RPP=31.2394;RPPR=1744.53;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=802;SRP=1744.53;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:114:103,11:103:3787:11:434:-5.09731,0,-306.628 0/0:177:177,0:177:6508:0:0:0,-53.2823,-585.646 0/0:113:111,2:111:4204:2:50:0,-29.2705,-373.687 0/0:110:110,0:110:4076:0:0:0,-33.1133,-366.924 0/0:165:165,0:165:6129:0:0:0,-49.6699,-551.566 0/0:136:136,0:136:5069:0:0:0,-40.9401,-456.233 dDocent_Contig_2165 107 . N C 101.644 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=102;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:67:-6.36304,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_2166 1 . N G 222.278 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=235;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:194:-17.8311,-1.50515,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 dDocent_Contig_2168 98 . N C 62.9349 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=62;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:42:-3.9887,-0.60206,0 1/1:1:0,1:0:0:1:20:-1.99996,-0.30103,0 dDocent_Contig_2169 17 . A G 1685.13 . AB=0.171233;ABP=551.292;AC=1;AF=0.0833333;AN=12;AO=102;CIGAR=1X;DP=1480;DPB=1480;DPRA=2.0382;EPP=224.5;EPPR=2993.13;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3921;QR=53510;RO=1377;RPL=0;RPP=224.5;RPPR=2993.13;RPR=102;RUN=1;SAF=102;SAP=224.5;SAR=0;SRF=1377;SRP=2993.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:143:143,0:143:5529:0:0:0,-43.0473,-497.542 0/0:163:161,2:161:6168:2:79:0,-41.5703,-547.491 0/0:58:58,0:58:2303:0:0:0,-17.4597,-207.438 0/0:28:28,0:28:1107:0:0:0,-8.42884,-99.9217 0/0:504:503,0:503:19467:0:0:0,-151.418,-1750.35 0/1:584:484,100:484:18936:100:3842:-170.036,0,-1527.17 dDocent_Contig_2170 19 . G T 69.1289 . AB=0.173913;ABP=24.253;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=186;DPB=186;DPRA=1.04918;EPP=16.0391;EPPR=389.532;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.61236;PAO=0;PQA=0;PQR=0;PRO=0;QA=245;QR=6952;RO=178;RPL=0;RPP=16.0391;RPPR=389.532;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=178;SRP=389.532;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:19,4:19:730:4:163:-8.13474,0,-59.0983 0/0:34:34,0:34:1339:0:0:0,-10.235,-120.779 0/0:41:38,2:38:1468:2:82:0,-4.65116,-124.592 0/0:34:34,0:34:1356:0:0:0,-10.235,-122.301 0/0:15:15,0:15:574:0:0:0,-4.51545,-51.9812 0/0:39:38,0:38:1485:0:0:0,-11.4391,-133.478 dDocent_Contig_2171 36 . A T 61.8143 . AB=0.0923077;ABP=284.533;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1M6D2M1X;DP=478;DPB=466.7;DPRA=1.0084;EPP=46.4397;EPPR=962.801;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.95;PAIREDR=0.957014;PAO=0;PQA=0;PQR=0;PRO=0;QA=799;QR=17390;RO=442;RPL=0;RPP=46.4397;RPPR=962.801;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=442;SRP=962.801;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:77:74,0:74:2907:0:0:0,-22.2762,-261.378 0|1:100:87,9:87:3435:9:356:-3.10222,0,-279.929 0|0:45:43,2:43:1696:2:79:0,-6.04872,-145.383 0|1:95:79,9:79:3099:9:364:-6.29537,0,-252.234 0|0:77:76,0:76:2985:0:0:0,-22.8783,-268.37 0|0:84:83,0:83:3268:0:0:0,-24.9855,-293.811 dDocent_Contig_2172 8 . A T 2697.49 . AB=0.12451;ABP=1252.15;AC=4;AF=0.333333;AN=12;AO=127;CIGAR=1X3M;DP=1020;DPB=1020;DPRA=0;EPP=278.787;EPPR=1625.1;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.965194;PAO=0;PQA=0;PQR=0;PRO=0;QA=4874;QR=28518;RO=747;RPL=0;RPP=278.787;RPPR=1625.1;RPR=127;RUN=1;SAF=127;SAP=278.787;SAR=0;SRF=747;SRP=1625.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:186:124,7,17,38:124:4729:7,17,38:269,652,1503:-86.3646,-101.61,-487.431,-70.1798,-436.023,-452.989,0,-365.85,-334.418,-376.495 0|1:232:147,13,38,33:147:5616:13,38,33:491,1460,1306:-75.6001,-79.6091,-536.466,0,-420.525,-449.33,-12.3728,-432.904,-353.293,-463.214 0|0:141:108,4,9,19:108:4185:4,9,19:152,347,772:-31.1763,-51.2244,-393.822,-35.1968,-366.532,-376.288,0,-331.35,-315.32,-338.095 0|1:202:151,7,25,18:151:5767:7,25,18:272,960,725:-33.3416,-56.446,-527.475,0,-450.778,-465.604,-19.0353,-469.824,-413.372,-486.758 0|1:116:101,0,15,0:101:3835:0,15,0:0,582,0:-17.8036,-48.2076,-362.673,0,-314.852,-310.337,-48.2076,-362.673,-314.852,-362.673 0|1:143:116,4,23,0:116:4386:4,23,0:143,873,0:-36.6846,-59.9493,-418.251,0,-347.869,-352.603,-71.6041,-419.455,-359.527,-431.112 dDocent_Contig_2173 1 . N G 72.0009 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=54;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=76;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:76:-7.19901,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_2177 47 . T C 20850 . AB=0.714464;ABP=323.413;AC=7;AF=0.583333;AN=12;AO=675;CIGAR=1X;DP=915;DPB=915;DPRA=0;EPP=1468.75;EPPR=524.164;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.991111;PAIREDR=0.995833;PAO=0;PQA=0;PQR=0;PRO=0;QA=26311;QR=9049;RO=240;RPL=0;RPP=1468.75;RPPR=524.164;RPR=675;RUN=1;SAF=675;SAP=1468.75;SAR=0;SRF=240;SRP=524.164;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:113:11,102:11:355:102:4016:-329.207,-1.76664,0 0/1:161:37,124:37:1432:124:4806:-384.028,0,-80.6855 0/1:100:21,79:21:797:79:3085:-247.649,0,-41.9488 0/1:101:38,63:38:1440:63:2416:-187.209,0,-99.4693 0/1:251:59,192:59:2214:192:7530:-601.814,0,-123.923 0/1:189:74,115:74:2811:115:4458:-344.317,0,-196.263 dDocent_Contig_2178 128 . G A 333.973 . AB=0.211111;ABP=68.251;AC=4;AF=0.333333;AN=12;AO=19;CIGAR=1X3M1X;DP=142;DPB=142;DPRA=0.865385;EPP=44.2683;EPPR=261.416;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.736842;PAIREDR=0.731092;PAO=0;PQA=0;PQR=0;PRO=0;QA=738;QR=4569;RO=119;RPL=19;RPP=44.2683;RPPR=261.416;RPR=0;RUN=1;SAF=0;SAP=44.2683;SAR=19;SRF=0;SRP=261.416;SRR=119;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:40:29,10:29:1114:10:388:-23.1755,0,-88.4621 0|1:21:17,3:17:662:3:117:-4.50012,0,-53.5069 0|1:16:13,2:13:500:2:77:-2.41231,0,-40.452 0|1:13:9,4:9:349:4:156:-10.5039,0,-27.8574 0|0:33:33,0:33:1254:0:0:0,-9.93399,-113.149 0|0:19:18,0:18:690:0:0:0,-5.41854,-62.035 dDocent_Contig_2179 1 . N G 156.772 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=162;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:121:-11.2802,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 dDocent_Contig_2180 70 . T G 103.509 . AB=0.170213;ABP=47.41;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=2X1M1I2M;DP=435;DPB=438.4;DPRA=1.17308;EPP=39.9253;EPPR=904.171;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.470588;PAIREDR=0.706024;PAO=0;PQA=0;PQR=0;PRO=0;QA=603;QR=14679;RO=415;RPL=11;RPP=6.20364;RPPR=17.7083;RPR=6;RUN=1;SAF=11;SAP=6.20364;SAR=6;SRF=234;SRP=17.7083;SRR=181;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:47:39,8:39:1407:8:282:-11.5727,0,-112.776 0|0:95:92,3:92:3178:3:105:0,-18.8018,-276.448 0|0:68:63,4:63:2236:4:146:0,-6.80826,-188.051 0|0:95:91,2:91:3228:2:70:0,-21.7082,-284.076 0|0:72:72,0:72:2536:0:0:0,-21.6742,-228.483 0|0:58:58,0:58:2094:0:0:0,-17.4597,-188.725 dDocent_Contig_2181 28 . G T 126.496 . AB=0.140845;ABP=82.5596;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=465;DPB=465;DPRA=0.623009;EPP=33.4109;EPPR=982.344;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.857143;PAIREDR=0.789357;PAO=0;PQA=0;PQR=0;PRO=0;QA=554;QR=17747;RO=451;RPL=0;RPP=33.4109;RPPR=982.344;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=451;SRP=982.344;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:61:60,1:60:2357:1:40:0,-14.3671,-208.29 0/1:71:61,10:61:2374:10:391:-14.1724,0,-192.446 0/0:49:48,1:48:1905:1:41:0,-10.6559,-167.556 0/0:60:59,1:59:2281:1:41:0,-13.9672,-201.363 0/0:111:110,1:110:4360:1:41:0,-29.3198,-388.269 0/0:113:113,0:113:4470:0:0:0,-34.0164,-402.245 dDocent_Contig_2182 29 . G A 51049.7 . AB=0.752435;ABP=684.916;AC=10;AF=0.833334;AN=12;AO=1440;CIGAR=7M1X4M;DP=1850;DPB=1855.17;DPRA=0;EPP=3129.93;EPPR=187.585;GTI=0;LEN=1;MEANALT=7.5;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=57126;QR=3242;RO=85;RPL=0;RPP=3129.93;RPPR=187.585;RPR=1440;RUN=1;SAF=1440;SAP=3129.93;SAR=0;SRF=85;SRP=187.585;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:323:31,0,0,1,288:31:1177:0,0,1,288:0,0,40,11379:-926.982,-936.314,-1032.83,-936.314,-1032.83,-1032.83,-933.019,-1029.54,-1029.54,-1029.24,0,-96.5417,-96.5417,-93.246,-9.84509 1|1:368:20,17,0,9,297:20:769:17,0,9,297:613,0,354,11787:-990.491,-946.502,-1004.52,-996.511,-1009.63,-1059.64,-967.392,-980.514,-1030.52,-1027.81,-26.2702,-39.3996,-89.4059,-60.2843,0 0|1:130:15,2,0,13,95:15:577:2,0,13,95:70,0,519,3769:-305.717,-304.538,-351.307,-310.232,-351.909,-357.603,-267.49,-309.167,-314.861,-310.948,0,-41.6762,-47.3687,-4.62153,-18.7709 1|1:250:6,10,0,3,216:6:227:10,0,3,216:383,0,121,8589:-751.722,-722.097,-737.695,-753.528,-740.706,-772.137,-743.554,-730.731,-762.163,-761.26,-46.4143,-33.5906,-65.0225,-55.0463,0 1|1:368:13,43,63,1,236:13:492:43,63,1,236:1612,2418,41,9392:-927.512,-799.41,-826.799,-732.958,-641.276,-754.326,-928.041,-836.359,-769.907,-968.073,-158.14,-66.458,0,-195.089,-127.431 1|1:411:0,31,64,0,308:0:0:31,64,0,308:1158,2492,0,12210:-1209.77,-1114.98,-1105.64,-1004.96,-910.168,-985.698,-1209.77,-1114.98,-1004.96,-1209.77,-204.823,-110.028,0,-204.823,-112.105 dDocent_Contig_2183 29 . G C 35645.2 . AB=0.345359;ABP=797.507;AC=6;AF=0.5;AN=12;AO=1321;CIGAR=1X;DP=3825;DPB=3825;DPRA=0;EPP=2871.53;EPPR=5436.03;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.980318;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=52560;QR=98185;RO=2502;RPL=0;RPP=2871.53;RPPR=5436.03;RPR=1321;RUN=1;SAF=1321;SAP=2871.53;SAR=0;SRF=2502;SRP=5436.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:510:399,111:399:15568:111:4413:-243.593,0,-1246.46 0/1:843:574,269:574:22608:269:10713:-709.687,0,-1779.1 0/1:467:312,154:312:12244:154:6082:-406.473,0,-960.455 0/1:683:418,265:418:16472:265:10568:-744.838,0,-1275.61 0/1:630:354,276:354:13917:276:11033:-802.567,0,-1061.9 0/1:692:445,246:445:17376:246:9751:-668.589,0,-1354.13 dDocent_Contig_2184 32 . C A 53868.1 . AB=0.668445;ABP=649.699;AC=6;AF=0.5;AN=12;AO=1754;CIGAR=1X3M1X;DP=2624;DPB=2624;DPRA=0;EPP=3811.77;EPPR=1709.79;GTI=0;LEN=1;MEANALT=4.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.987457;PAIREDR=0.97201;PAO=0;PQA=0;PQR=0;PRO=0;QA=68542;QR=30882;RO=786;RPL=0;RPP=3811.77;RPPR=1709.79;RPR=1754;RUN=1;SAF=1754;SAP=3811.77;SAR=0;SRF=786;SRP=1709.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:361:139,0,220:139:5439:0,220:0,8528:-658.704,-700.547,-1147.72,0,-447.152,-380.925 0|1:584:125,0,452:125:4899:0,452:0,17675:-1415.49,-1453.12,-1855.94,0,-402.838,-266.773 0|1:378:119,0,251:119:4722:0,251:0,9864:-775.472,-811.295,-1200,0,-388.696,-313.137 0|1:396:125,1,266:125:4927:1,266:41,10354:-813.244,-847.488,-1252.54,0,-401.964,-325.274 0|1:420:116,22,272:116:4569:22,272:860,10642:-840.022,-804.245,-1173.48,0,-305.165,-293.981 0|1:485:162,17,293:162:6326:17,293:665,11479:-895.104,-889.196,-1404.09,0,-465.33,-431.803 dDocent_Contig_2185 98 . N T 83.5611 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=83;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:49:-4.65446,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 dDocent_Contig_2196 1 . N G 188.94 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=198;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:119:-11.0945,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:79:-7.49763,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_2198 53 . T C 8240.11 . AB=0.285099;ABP=468.728;AC=2;AF=0.166667;AN=12;AO=332;CIGAR=1X;DP=3261;DPB=3261;DPRA=1.04068;EPP=723.939;EPPR=6354.57;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.996988;PAIREDR=0.997949;PAO=0;PQA=0;PQR=0;PRO=0;QA=13116;QR=111555;RO=2925;RPL=332;RPP=723.939;RPPR=6354.57;RPR=0;RUN=1;SAF=332;SAP=723.939;SAR=0;SRF=2925;SRP=6354.57;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:479:479,0:479:18248:0:0:0,-144.193,-1641.23 0/0:618:616,0:616:23547:0:0:0,-185.434,-2117.46 0/0:502:501,1:501:19161:1:40:0,-147.121,-1719.3 0/0:501:501,0:501:19043:0:0:0,-150.816,-1712.7 0/1:611:404,206:404:15389:206:8173:-551.421,0,-1200.44 0/1:550:424,125:424:16167:125:4903:-275.812,0,-1288.72 dDocent_Contig_2199 44 . T G 546.571 . AB=0.13253;ABP=392.41;AC=1;AF=0.0833333;AN=12;AO=96;CIGAR=1X;DP=1967;DPB=1967;DPRA=1.02937;EPP=211.472;EPPR=4063.66;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3798;QR=74915;RO=1870;RPL=0;RPP=211.472;RPPR=4063.66;RPR=96;RUN=1;SAF=96;SAP=211.472;SAR=0;SRF=1870;SRP=4063.66;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:332:288,44:288:11524:44:1729:-55.8789,0,-936.389 0/0:344:322,22:322:12889:22:883:0,-23.7755,-1079.25 0/0:270:258,12:258:10381:12:477:0,-37.9989,-890.289 0/0:494:477,17:477:19060:17:669:0,-88.1713,-1653.26 0/0:320:320,0:320:12763:0:0:0,-96.3296,-1147.73 0/0:207:205,1:205:8298:1:40:0,-58.421,-742.313 dDocent_Contig_2200 54 . C A 62.912 . AB=0.227273;ABP=17.2236;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=242;DPB=242;DPRA=0.5;EPP=13.8677;EPPR=515.478;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=157;QR=8555;RO=236;RPL=5;RPP=13.8677;RPPR=515.478;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=236;SRP=515.478;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:512:0:0:0,-4.21442,-46.4204 0/0:82:82,0:82:2955:0:0:0,-24.6845,-266.17 0/1:22:17,5:17:617:5:157:-7.81408,0,-49.241 0/0:37:36,0:36:1305:0:0:0,-10.8371,-117.668 0/0:49:49,0:49:1784:0:0:0,-14.7505,-160.835 0/0:38:38,0:38:1382:0:0:0,-11.4391,-124.677 dDocent_Contig_2201 33 . C A 9287.89 . AB=0.165485;ABP=3156.99;AC=5;AF=0.416667;AN=12;AO=583;CIGAR=1X;DP=3854;DPB=3854;DPRA=0;EPP=1268.98;EPPR=7101.55;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=59.6889;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.977669;PAO=0;PQA=0;PQR=0;PRO=0;QA=23120;QR=130846;RO=3269;RPL=0;RPP=1268.98;RPPR=7101.55;RPR=583;RUN=1;SAF=583;SAP=1268.98;SAR=0;SRF=3269;SRP=7101.55;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:559:507,52:507:20244:52:2081:-19.2018,0,-1648.93 0/1:736:608,127:608:24366:127:4976:-226.406,0,-1969.13 0/1:472:380,92:380:15272:92:3660:-187.341,0,-1231.15 0/1:735:594,141:594:23819:141:5598:-282.387,0,-1918.66 0/1:743:617,125:617:24640:125:4958:-222.676,0,-1989.71 0/0:609:563,46:563:22505:46:1847:0,-16.8892,-1857.06 dDocent_Contig_2202 37 . G A 183.96 . AB=0.14;ABP=115.579;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1X;DP=463;DPB=463;DPRA=1.27208;EPP=44.2683;EPPR=967.144;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990991;PAO=0;PQA=0;PQR=0;PRO=0;QA=740;QR=17494;RO=444;RPL=0;RPP=44.2683;RPPR=967.144;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=444;SRP=967.144;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:70:70,0:70:2709:0:0:0,-21.0721,-243.942 0/0:80:75,5:75:2943:5:188:0,-6.80141,-247.709 0/0:48:48,0:48:1930:0:0:0,-14.4494,-173.896 0/0:53:53,0:53:2084:0:0:0,-15.9546,-187.756 0/0:112:112,0:112:4432:0:0:0,-33.7154,-398.846 0/1:100:86,14:86:3396:14:552:-19.9189,0,-275.6 dDocent_Contig_2204 7 . T G 144341 . AB=0.175065;ABP=4261.94;AC=4;AF=0.333333;AN=12;AO=879;CIGAR=1X3M1X2M1X;DP=5786;DPB=5786;DPRA=0;EPP=1911.73;EPPR=1108.29;GTI=0;LEN=1;MEANALT=10.5;MQM=59.9192;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=31362;QR=19301;RO=509;RPL=0;RPP=1911.73;RPPR=1108.29;RPR=879;RUN=1;SAF=879;SAP=1911.73;SAR=0;SRF=509;SRP=1108.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:841:92,169,480,76:92:3473:169,480,76:5987,19179,3055:-1754.93,-1295,-1528.76,-202.98,0,-343.131,-1530.88,-1327.89,-235.869,-1792.64 0|0:1089:177,111,747,39:177:6724:111,747,39:3923,29780,1563:-2399,-2132.84,-2650.84,0,-231.985,-326.554,-2323.52,-2555.49,-422.652,-2863.19 1|0:756:67,228,351,97:67:2552:228,351,97:8235,13986,3870:-1593.88,-942.294,-1082.99,-462.416,0,-566.087,-1295.36,-832.94,-353.058,-1475.49 1|0:925:141,173,537,34:141:5336:173,537,34:6138,21482,1369:-1789.63,-1332.06,-1717.41,-62.5759,0,-338.359,-1719.25,-1656.66,-387.181,-2146.44 1|0:1033:15,132,876,0:15:565:132,876,0:4735,34979,0:-3216.17,-2834.53,-2841.09,-339.852,0,-122.448,-3220.69,-2880.82,-386.15,-3266.98 0|0:1142:17,66,1046,0:17:651:66,1046,0:2344,41695,0:-3689.74,-3503.9,-3537.46,-261.446,-123.93,0,-3694.85,-3557.32,-314.877,-3748.28 dDocent_Contig_2205 16 . C G 19646 . AB=0.184695;ABP=4697.16;AC=6;AF=0.5;AN=12;AO=1004;CIGAR=1X;DP=5436;DPB=5436;DPRA=0;EPP=2183.17;EPPR=9624.8;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999549;PAO=0;PQA=0;PQR=0;PRO=0;QA=40157;QR=178182;RO=4431;RPL=0;RPP=2183.17;RPPR=9624.8;RPR=1004;RUN=1;SAF=1004;SAP=2183.17;SAR=0;SRF=4431;SRP=9624.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:764:591,172:591:23766:172:6873:-388.185,0,-1906.72 0/1:907:778,129:778:31176:129:5167:-191.846,0,-2529.88 0/1:710:530,180:530:21311:180:7204:-434.259,0,-1702.36 0/1:831:652,179:652:26143:179:7154:-393.358,0,-2100.31 0/1:1198:1041,157:1041:41998:157:6289:-205.119,0,-3415.01 0/1:1026:839,187:839:33788:187:7470:-363.056,0,-2728.8 dDocent_Contig_2206 24 . G A 929.854 . AB=0.27673;ABP=71.8555;AC=4;AF=0.333333;AN=12;AO=49;CIGAR=1X;DP=234;DPB=234;DPRA=0;EPP=109.412;EPPR=404.733;GTI=0;LEN=1;MEANALT=1;MQM=47.898;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.55102;PAIREDR=0.756757;PAO=0;PQA=0;PQR=0;PRO=0;QA=1959;QR=7317;RO=185;RPL=0;RPP=109.412;RPPR=404.733;RPR=49;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=185;SRP=404.733;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:32,3:32:1271:3:122:0,-1.25428,-105.382 0/1:25:15,10:15:609:10:398:-26.5281,0,-47.6218 0/0:40:38,2:38:1462:2:81:0,-5.01378,-124.795 0/1:52:47,5:47:1860:5:202:-0.84766,0,-151.959 0/1:41:27,14:27:1068:14:557:-34.0668,0,-84.0671 0/1:41:26,15:26:1047:15:599:-37.6074,0,-82.1798 dDocent_Contig_2208 96 . A T 2310.34 . AB=0.591837;ABP=13.779;AC=2;AF=0.166667;AN=12;AO=87;CIGAR=1X;DP=271;DPB=271;DPRA=2.37097;EPP=191.928;EPPR=402.561;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3088;QR=6374;RO=184;RPL=87;RPP=191.928;RPPR=402.561;RPR=0;RUN=1;SAF=87;SAP=191.928;SAR=0;SRF=184;SRP=402.561;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:15,10:15:510:10:362:-25.3996,0,-38.696 0/0:41:41,0:41:1427:0:0:0,-12.3422,-128.726 0/0:23:23,0:23:817:0:0:0,-6.92369,-73.8528 0/0:21:21,0:21:744:0:0:0,-6.32163,-67.2853 0/0:39:39,0:39:1353:0:0:0,-11.7402,-122.066 0/1:122:45,77:45:1523:77:2726:-208.856,0,-100.626 dDocent_Contig_2209 94 . G A 5315.97 . AB=0.27109;ABP=483.182;AC=4;AF=0.333333;AN=12;AO=341;CIGAR=1X;DP=1661;DPB=1661;DPRA=0;EPP=743.482;EPPR=2869.35;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998485;PAO=0;PQA=0;PQR=0;PRO=0;QA=11344;QR=44797;RO=1320;RPL=341;RPP=743.482;RPPR=2869.35;RPR=0;RUN=1;SAF=341;SAP=743.482;SAR=0;SRF=1320;SRP=2869.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:224:185,39:185:6260:39:1311:-50.8544,0,-496.114 0/0:381:347,34:347:11695:34:1135:0,-12.2421,-950.077 0/1:270:209,61:209:7137:61:2029:-101.601,0,-561.168 0/1:261:229,32:229:7787:32:1081:-19.0253,0,-622.357 0/1:300:146,154:146:4944:154:5083:-367.338,0,-354.835 0/0:225:204,21:204:6974:21:705:0,-3.96706,-564.012 dDocent_Contig_2210 70 . C T 90.8525 . AB=0.2;ABP=22.5536;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=154;DPB=154;DPRA=0.968992;EPP=13.8677;EPPR=326.56;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.852349;PAO=0;PQA=0;PQR=0;PRO=0;QA=194;QR=5769;RO=149;RPL=5;RPP=13.8677;RPPR=326.56;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=149;SRP=326.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:20,5:20:767:5:194:-10.3071,0,-61.8325 0/0:24:24,0:24:911:0:0:0,-7.22472,-82.3043 0/0:20:20,0:20:789:0:0:0,-6.0206,-71.3301 0/0:32:32,0:32:1197:0:0:0,-9.63296,-108.005 0/0:38:38,0:38:1509:0:0:0,-11.4391,-136.06 0/0:15:15,0:15:596:0:0:0,-4.51545,-53.9765 dDocent_Contig_2211 18 . A G 33.9639 . AB=0.102941;ABP=96.1281;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=400;DPB=400;DPRA=1.0888;EPP=29.068;EPPR=845.542;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.765464;PAO=0;PQA=0;PQR=0;PRO=0;QA=476;QR=15556;RO=388;RPL=0;RPP=29.068;RPPR=845.542;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=388;SRP=845.542;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:72:72,0:72:2889:0:0:0,-21.6742,-260.106 0/0:69:69,0:69:2762:0:0:0,-20.7711,-248.686 0/0:61:61,0:61:2456:0:0:0,-18.3628,-221.182 0/0:57:57,0:57:2279:0:0:0,-17.1587,-205.267 0/0:73:68,5:68:2730:5:198:0,-3.77819,-227.613 0/1:68:61,7:61:2440:7:278:-4.9191,0,-199.278 dDocent_Contig_2212 19 . T C 85672.9 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=2443;CIGAR=1X;DP=2514;DPB=2514;DPRA=0;EPP=5281.89;EPPR=157.185;GTI=0;LEN=1;MEANALT=1;MQM=59.9836;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.990995;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=98135;QR=2838;RO=71;RPL=0;RPP=5307.92;RPPR=157.185;RPR=2443;RUN=1;SAF=2440;SAP=5281.89;SAR=3;SRF=71;SRP=157.185;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:364:11,353:11:442:353:14192:-1236.02,-69.4423,0 1/1:506:0,506:0:0:506:20298:-1825.05,-152.321,0 1/1:436:12,424:12:484:424:17002:-1484.75,-87.338,0 1/1:309:18,291:18:726:291:11730:-988.855,-27.3543,0 1/1:415:14,401:14:560:401:16085:-1395.58,-74.1863,0 1/1:484:16,468:16:626:468:18828:-1636.19,-89.0293,0 dDocent_Contig_2213 20 . A T 135.841 . AB=0.0625;ABP=189.214;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X1M1X;DP=376;DPB=376;DPRA=0.992063;EPP=37.7539;EPPR=756.511;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.375;PAIREDR=0.616715;PAO=0;PQA=0;PQR=0;PRO=0;QA=625;QR=13627;RO=347;RPL=0;RPP=37.7539;RPPR=756.511;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=347;SRP=756.511;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:39:33,5,1:33:1302:5,1:190,39:-5.63872,0,-105.623,-12.3652,-103.922,-119.2 0|0:73:62,2,9:62:2416:2,9:81,362:-11.1672,-23.1514,-221.098,0,-191.865,-195.836 0|0:70:69,0,0:69:2721:0,0:0,0:0,-20.7711,-244.63,-20.7711,-244.63,-244.63 0|0:81:74,5,2:74:2935:5,2:194,80:0,-6.34545,-246.427,-15.6827,-241.342,-256.678 0|0:57:53,4,0:53:2069:4,0:160,0:0,-2.3747,-171.624,-15.9546,-172.828,-186.009 0|0:56:56,0,0:56:2184:0,0:0,0:0,-16.8577,-196.748,-16.8577,-196.748,-196.748 dDocent_Contig_2214 1 . N G 76.8682 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_2215 1 . N C 206.181 . AB=0;ABP=0;AC=6;AF=0.999999;AN=6;AO=2;CIGAR=1X8M;DP=8;DPB=40.5556;DPRA=0.5;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=0;NS=3;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0;PAO=12.6667;PQA=427.833;PQR=427.833;PRO=12.6667;QA=41;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:3:0,0,2,1:0:0:0,2,1:0,69,7:-6.1095,-6.1095,-6.1095,-0.60206,-0.60206,0,-5.94254,-5.94254,-0.203092,-5.64151 1|1:4:0,4,0,0:0:0:4,0,0:130,0,0:-11.012,-1.20412,0,-11.012,-1.20412,-11.012,-11.012,-1.20412,-11.012,-11.012 .:.:.:.:.:.:.:. 1|1:1:0,0,0,1:0:0:0,0,1:0,0,34:-3.015,-3.015,-3.015,-3.015,-3.015,-3.015,-0.30103,-0.30103,-0.30103,0 dDocent_Contig_2216 40 . C T 9163.69 . AB=0.134165;ABP=5964.19;AC=6;AF=0.5;AN=12;AO=688;CIGAR=1X;DP=5128;DPB=5128;DPRA=0;EPP=1496.98;EPPR=9644.35;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997297;PAO=0;PQA=0;PQR=0;PRO=0;QA=27464;QR=177460;RO=4440;RPL=0;RPP=1496.98;RPPR=9644.35;RPR=688;RUN=1;SAF=688;SAP=1496.98;SAR=0;SRF=4440;SRP=9644.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:748:675,73:675:26789:73:2921:-37.8159,0,-2183.43 0/1:929:804,125:804:32271:125:5016:-171.647,0,-2621.67 0/1:657:579,78:579:23169:78:3104:-81.6565,0,-1885.36 0/1:1052:946,106:946:37816:106:4229:-63.8796,0,-3083.18 0/1:913:726,187:726:29066:187:7441:-394.475,0,-2338.4 0/1:829:710,119:710:28349:119:4753:-178.117,0,-2299.24 dDocent_Contig_2217 117 . T C 10795.6 . AB=0.780822;ABP=203.024;AC=8;AF=0.666667;AN=12;AO=396;CIGAR=1X;DP=466;DPB=466;DPRA=0;EPP=862.913;EPPR=107.365;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=56.4857;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.914286;PAO=0;PQA=0;PQR=0;PRO=0;QA=13246;QR=2379;RO=70;RPL=0;RPP=862.913;RPPR=155.013;RPR=396;RUN=1;SAF=0;SAP=862.913;SAR=396;SRF=6;SRP=107.365;SRR=64;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:76:19,57:19:648:57:1863:-145.066,0,-35.7626 0/1:77:16,61:16:537:61:1976:-154.928,0,-25.4707 0/1:83:15,68:15:493:68:2301:-182.37,0,-19.6969 1/1:87:6,81:6:208:81:2736:-227.432,-7.13002,0 0/1:56:14,42:14:493:42:1419:-111.146,0,-17.1243 1/1:87:0,87:0:0:87:2951:-265.835,-26.1896,0 dDocent_Contig_2218 19 . T G 131570 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=3848;CIGAR=1X;DP=4002;DPB=4002;DPRA=0;EPP=8358.84;EPPR=335.246;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0.99974;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=152477;QR=6132;RO=153;RPL=0;RPP=8358.84;RPPR=335.246;RPR=3848;RUN=1;SAF=3848;SAP=8358.84;SAR=0;SRF=153;SRP=335.246;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:603:45,558:45:1815:558:22052:-1819.31,-17.9647,0 1/1:756:40,716:40:1573:716:28531:-2423.45,-85.7746,0 1/1:600:28,572:28:1134:572:22646:-1933.91,-78.2797,0 1/1:516:6,510:6:240:510:20115:-1786.75,-133.356,0 1/1:758:0,757:0:0:757:30146:-2710.05,-227.88,0 1/1:769:34,735:34:1370:735:28987:-2482.76,-107.939,0 dDocent_Contig_2219 30 . G C 56.4955 . AB=0.092233;ABP=300.523;AC=1;AF=0.0833333;AN=12;AO=40;CIGAR=1X;DP=1282;DPB=1282;DPRA=0.6671;EPP=89.8692;EPPR=2652.38;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.780645;PAO=0;PQA=0;PQR=0;PRO=0;QA=1586;QR=49423;RO=1240;RPL=0;RPP=89.8692;RPPR=2695.64;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=1235;SRP=2652.38;SRR=5;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:130:130,0:130:5187:0:0:0,-39.1339,-466.696 0/1:206:185,19:185:7376:19:763:-7.17243,0,-601.658 0/0:157:145,12:145:5817:12:480:0,-3.71106,-479.765 0/0:150:141,9:141:5608:9:343:0,-13.931,-473.333 0/0:347:347,0:347:13832:0:0:0,-104.457,-1243.86 0/0:292:292,0:292:11603:0:0:0,-87.9008,-1043.47 dDocent_Contig_2220 106 . N C 1353.05 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=64;CIGAR=2X;DP=64;DPB=64.5;DPRA=0;EPP=141.985;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=24;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=1;PQA=32;PQR=0;PRO=0;QA=2145;QR=0;RO=0;RPL=0;RPP=141.985;RPPR=0;RPR=64;RUN=1;SAF=0;SAP=141.985;SAR=64;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:9:0,9:0:0:9:298:-19.1971,-2.70927,0 1|1:33:0,33:0:0:33:1091:-68.4997,-9.93399,0 1|1:10:0,10:0:0:10:343:-21.1687,-3.0103,0 1|1:12:0,12:0:0:12:413:-25.7404,-3.61236,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_2221 31 . G T 33.7975 . AB=0.0987654;ABP=116.275;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1X;DP=529;DPB=529;DPRA=0.771635;EPP=44.2683;EPPR=1110.46;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.736842;PAIREDR=0.964706;PAO=0;PQA=0;PQR=0;PRO=0;QA=758;QR=20339;RO=510;RPL=0;RPP=44.2683;RPPR=1110.46;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=510;SRP=1110.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:81:73,8:73:2893:8:318:-4.60142,0,-236.085 0/0:89:85,4:85:3364:4:163:0,-11.7332,-287.75 0/0:71:68,3:68:2702:3:119:0,-10.2781,-232.204 0/0:80:76,4:76:3051:4:158:0,-9.48192,-260.07 0/0:105:105,0:105:4220:0:0:0,-31.6081,-379.745 0/0:103:103,0:103:4109:0:0:0,-31.0061,-369.78 dDocent_Contig_2223 20 . C A 1413.49 . AB=0.142259;ABP=800.032;AC=5;AF=0.416667;AN=12;AO=110;CIGAR=1X;DP=942;DPB=942;DPRA=0;EPP=241.872;EPPR=1807.5;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.99639;PAO=0;PQA=0;PQR=0;PRO=0;QA=4381;QR=33439;RO=831;RPL=0;RPP=241.872;RPPR=1807.5;RPR=110;RUN=1;SAF=110;SAP=241.872;SAR=0;SRF=831;SRP=1807.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:109:97,12:97:3877:12:477:-10.4689,0,-316.103 0/1:108:83,25:83:3353:25:969:-54.9903,0,-269.294 0/1:183:154,28:154:6187:28:1123:-46.1582,0,-501.372 0/1:154:136,18:136:5463:18:717:-18.4922,0,-445.131 0/0:225:217,8:217:8754:8:326:0,-38.0219,-757.601 0/1:163:144,19:144:5805:19:769:-20.4611,0,-473.145 dDocent_Contig_2224 192 . A C 748.845 . AB=0.322581;ABP=36.9133;AC=5;AF=0.416667;AN=12;AO=40;CIGAR=2X;DP=132;DPB=132;DPRA=3.1;EPP=89.8692;EPPR=200.614;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1331;QR=3623;RO=91;RPL=40;RPP=89.8692;RPPR=200.614;RPR=0;RUN=1;SAF=0;SAP=89.8692;SAR=40;SRF=0;SRP=200.614;SRR=91;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:24:16,8:16:636:8:272:-17.5873,0,-50.35 0|1:22:19,3:19:745:3:102:-2.89429,0,-60.7474 0|1:37:28,9:28:1124:9:292:-15.4598,0,-90.3051 0|1:22:11,11:11:434:11:363:-26.368,0,-32.7891 0|0:8:7,0:7:285:0:0:0,-2.10721,-25.624 0|1:19:10,9:10:399:9:302:-21.7878,0,-30.5487 dDocent_Contig_2225 13 . A G 15757.5 . AB=0.31466;ABP=572.896;AC=6;AF=0.5;AN=12;AO=601;CIGAR=1X;DP=1910;DPB=1910;DPRA=0;EPP=1308.07;EPPR=2845.47;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.993344;PAIREDR=0.998472;PAO=0;PQA=0;PQR=0;PRO=0;QA=24023;QR=52343;RO=1309;RPL=0;RPP=1308.07;RPPR=2845.47;RPR=601;RUN=1;SAF=601;SAP=1308.07;SAR=0;SRF=1309;SRP=2845.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:286:159,127:159:6324:127:5103:-373.034,0,-482.822 0/1:363:286,77:286:11424:77:3098:-169.622,0,-918.1 0/1:192:162,30:162:6510:30:1178:-48.5013,0,-527.805 0/1:394:260,134:260:10425:134:5349:-362.639,0,-818.945 0/1:339:205,134:205:8193:134:5362:-380.367,0,-634.869 0/1:336:237,99:237:9467:99:3933:-252.81,0,-750.295 dDocent_Contig_2226 21 . C T 475.646 . AB=0.148472;ABP=248.804;AC=2;AF=0.166667;AN=12;AO=35;CIGAR=1X;DP=640;DPB=640;DPRA=1.19931;EPP=79.0118;EPPR=1314.58;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.828571;PAIREDR=0.930464;PAO=0;PQA=0;PQR=0;PRO=0;QA=1364;QR=24040;RO=604;RPL=0;RPP=79.0118;RPPR=1314.58;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=604;SRP=1314.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:100:100,0:100:3961:0:0:0,-30.103,-356.473 0/0:120:119,1:119:4759:1:41:0,-32.029,-424.107 0/0:104:104,0:104:4106:0:0:0,-31.3071,-369.507 0/0:87:86,0:86:3443:0:0:0,-25.8886,-309.717 0/1:93:82,11:82:3262:11:428:-10.8707,0,-265.648 0/1:136:113,23:113:4509:23:895:-39.9157,0,-364.8 dDocent_Contig_2227 27 . C T 29249.4 . AB=0.865096;ABP=543.698;AC=10;AF=0.833333;AN=12;AO=871;CIGAR=1X;DP=955;DPB=955;DPRA=0;EPP=1894.36;EPPR=185.414;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=34968;QR=3302;RO=84;RPL=0;RPP=1894.36;RPPR=185.414;RPR=871;RUN=1;SAF=871;SAP=1894.36;SAR=0;SRF=84;SRP=185.414;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:144:32,112:32:1253:112:4500:-361.568,0,-69.6932 1/1:227:7,220:7:279:220:8780:-764.185,-42.853,0 1/1:184:14,170:14:569:170:6844:-564.07,-3.83762,0 0/1:323:31,292:31:1201:292:11732:-957.787,0,-11.1234 1/1:30:0,30:0:0:30:1215:-109.621,-9.0309,0 1/1:47:0,47:0:0:47:1897:-170.927,-14.1484,0 dDocent_Contig_2228 97 . T C 1152.6 . AB=0.159091;ABP=624.841;AC=1;AF=0.0833333;AN=12;AO=190;CIGAR=1X;DP=4574;DPB=4574;DPRA=0.77735;EPP=415.59;EPPR=9516.23;GTI=0;LEN=1;MEANALT=1.6;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.984022;PAO=0;PQA=0;PQR=0;PRO=0;QA=6450;QR=152858;RO=4381;RPL=190;RPP=415.59;RPPR=9516.23;RPR=0;RUN=1;SAF=190;SAP=415.59;SAR=0;SRF=4381;SRP=9516.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:616:518,98:518:18074:98:3352:-116.482,0,-1440.89 0/0:731:682,48:682:23896:48:1639:0,-72.0276,-2002.26 0/0:511:509,2:509:17841:2:68:0,-147.368,-1598.87 0/0:633:591,41:591:20629:41:1373:0,-66.5042,-1732.32 0/0:936:936,0:936:32612:0:0:0,-281.764,-2934.17 0/0:1147:1145,1:1145:39806:1:18:0,-343.445,-3579.49 dDocent_Contig_2229 87 . A G 112.168 . AB=0.122807;ABP=214.329;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=1X;DP=1273;DPB=1273;DPRA=1.61934;EPP=57.2971;EPPR=2710.84;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=850;QR=42911;RO=1247;RPL=25;RPP=57.2971;RPPR=2710.84;RPR=0;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=1247;SRP=2710.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:119:119,0:119:4112:0:0:0,-35.8226,-370.287 0/0:236:232,3:232:7970:3:105:0,-61.0858,-707.652 0/0:110:110,0:110:3806:0:0:0,-33.1133,-342.759 0/1:171:150,21:150:5142:21:710:-12.7397,0,-411.478 0/0:380:379,1:379:13053:1:35:0,-110.893,-1171.18 0/0:257:257,0:257:8828:0:0:0,-77.3647,-794.571 dDocent_Contig_2230 90 . T G 960.851 . AB=0.328859;ABP=40.9163;AC=2;AF=0.166667;AN=12;AO=52;CIGAR=1X;DP=323;DPB=323;DPRA=1.44578;EPP=115.927;EPPR=591.479;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.942308;PAIREDR=0.937269;PAO=0;PQA=0;PQR=0;PRO=0;QA=1696;QR=9212;RO=271;RPL=52;RPP=115.927;RPPR=591.479;RPR=0;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=271;SRP=591.479;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:42:42,0:42:1419:0:0:0,-12.6433,-128.002 0/0:43:42,1:42:1432:1:32:0,-9.74498,-125.976 0/0:41:41,0:41:1367:0:0:0,-12.3422,-123.322 0/0:48:46,2:46:1545:2:69:0,-7.89678,-132.783 0/1:66:50,16:50:1712:16:533:-28.4197,0,-134.5 0/1:83:50,33:50:1737:33:1062:-70.8872,0,-131.633 dDocent_Contig_2231 34 . G A 289.075 . AB=0.134078;ABP=211.193;AC=2;AF=0.166667;AN=12;AO=31;CIGAR=1X;DP=494;DPB=494;DPRA=1.13576;EPP=70.3259;EPPR=1008.4;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.83871;PAIREDR=0.647948;PAO=0;PQA=0;PQR=0;PRO=0;QA=1227;QR=18540;RO=463;RPL=0;RPP=70.3259;RPPR=1008.4;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=463;SRP=1008.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:87:84,3:84:3372:3:119:0,-15.0946,-292.428 0/1:101:91,10:91:3636:10:386:-4.68618,0,-296.861 0/1:78:64,14:64:2585:14:562:-27.443,0,-209.293 0/0:77:73,4:73:2914:4:160:0,-8.39588,-247.58 0/0:68:68,0:68:2723:0:0:0,-20.47,-245.183 0/0:83:83,0:83:3310:0:0:0,-24.9855,-297.959 dDocent_Contig_2232 19 . A T 67.5629 . AB=0.0965909;ABP=251.792;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=680;DPB=680;DPRA=1.45178;EPP=42.0968;EPPR=1438.35;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992436;PAO=0;PQA=0;PQR=0;PRO=0;QA=716;QR=26398;RO=661;RPL=0;RPP=42.0968;RPPR=1438.35;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=661;SRP=1438.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:53:53,0:53:2139:0:0:0,-15.9546,-192.677 0/0:110:108,1:108:4311:1:39:0,-29.2904,-384.063 0/0:59:59,0:59:2359:0:0:0,-17.7608,-212.459 0/0:136:136,0:136:5431:0:0:0,-40.9401,-488.628 0/0:146:146,0:146:5796:0:0:0,-43.9504,-521.428 0/1:176:159,17:159:6362:17:677:-8.27917,0,-519.335 dDocent_Contig_2233 29 . G A 14099.8 . AB=0.260482;ABP=1120.2;AC=2;AF=0.166667;AN=12;AO=619;CIGAR=1X;DP=5285;DPB=5285;DPRA=1.07196;EPP=1347.15;EPPR=10135.1;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998384;PAIREDR=0.999571;PAO=0;PQA=0;PQR=0;PRO=0;QA=24574;QR=183935;RO=4666;RPL=0;RPP=1347.15;RPPR=10135.1;RPR=619;RUN=1;SAF=619;SAP=1347.15;SAR=0;SRF=4666;SRP=10135.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:831:831,0:831:32820:0:0:0,-250.156,-2950.92 0/0:910:893,17:893:35274:17:646:0,-215.475,-3113.05 0/0:513:512,1:512:20093:1:37:0,-150.731,-1803.05 0/0:789:772,17:772:30546:17:672:0,-176.703,-2685.65 0/1:1151:823,328:823:32381:328:13073:-829.126,0,-2564.98 0/1:1091:835,256:835:32821:256:10146:-584.078,0,-2622.54 dDocent_Contig_2234 35 . T A 33.1115 . AB=0.105263;ABP=105.87;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X2M1X;DP=433;DPB=433;DPRA=1.06443;EPP=20.3821;EPPR=923.715;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=302;QR=16353;RO=424;RPL=0;RPP=20.3821;RPPR=923.715;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=424;SRP=923.715;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:55:55,0:55:2113:0:0:0,-16.5566,-190.381 0|0:60:60,0:60:2309:0:0:0,-18.0618,-208.004 0|1:76:67,8:67:2568:8:302:-4.83382,0,-208.633 0|0:56:56,0:56:2176:0:0:0,-16.8577,-196.042 0|0:79:79,0:79:3051:0:0:0,-23.7814,-274.736 0|0:107:107,0:107:4136:0:0:0,-32.2102,-372.288 dDocent_Contig_2235 98 . N T 1839.19 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=62;CIGAR=1X;DP=63;DPB=63;DPRA=0;EPP=137.642;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.8548;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2018;QR=0;RO=0;RPL=62;RPP=137.642;RPPR=0;RPR=0;RUN=1;SAF=62;SAP=137.642;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:12:0,12:0:0:12:371:-33.6859,-3.61236,0 1/1:15:0,15:0:0:15:530:-48.0327,-4.51545,0 1/1:8:0,7:0:0:7:200:-17.9387,-2.10721,0 1/1:9:0,9:0:0:9:292:-26.5934,-2.70927,0 1/1:11:0,11:0:0:11:351:-31.8967,-3.31133,0 1/1:8:0,8:0:0:8:274:-24.993,-2.40824,0 dDocent_Contig_2237 15 . A G 709.142 . AB=0.154341;ABP=325.764;AC=3;AF=0.25;AN=12;AO=65;CIGAR=1X;DP=568;DPB=568;DPRA=0;EPP=144.156;EPPR=1090.92;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.978044;PAO=0;PQA=0;PQR=0;PRO=0;QA=2529;QR=20000;RO=501;RPL=0;RPP=144.156;RPPR=1090.92;RPR=65;RUN=1;SAF=65;SAP=144.156;SAR=0;SRF=501;SRP=1090.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:99:93,6:93:3717:6:240:0,-7.82743,-312.57 0/1:83:71,12:71:2841:12:482:-18.7454,0,-230.811 0/0:71:66,5:66:2659:5:188:0,-4.09355,-222.15 0/0:87:81,6:81:3266:6:228:0,-5.30602,-273.106 0/1:109:99,10:99:3933:10:405:-3.99727,0,-321.167 0/1:119:91,26:91:3584:26:986:-53.3927,0,-286.969 dDocent_Contig_2238 98 . N A 64.5902 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=68;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 dDocent_Contig_2239 12 . G A 8118.46 . AB=0.802691;ABP=180.477;AC=7;AF=0.583333;AN=12;AO=250;CIGAR=1X;DP=297;DPB=297;DPRA=0;EPP=545.878;EPPR=105.07;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9978;QR=1879;RO=47;RPL=0;RPP=545.878;RPPR=105.07;RPR=250;RUN=1;SAF=250;SAP=545.878;SAR=0;SRF=47;SRP=105.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:17:5,12:5:195:12:463:-36.8995,0,-12.8054 1/1:74:3,71:3:120:71:2829:-243.534,-11.0889,0 0/1:43:11,32:11:442:32:1285:-102.97,0,-27.1904 0/1:53:12,41:12:481:41:1631:-131.069,0,-27.687 0/1:55:10,45:10:404:45:1816:-147.09,0,-20.1638 0/1:55:6,49:6:237:49:1954:-159.506,0,-5.14467 dDocent_Contig_2240 10 . G T 36020.4 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=1057;CIGAR=1X;DP=1116;DPB=1116;DPRA=0;EPP=2298.26;EPPR=126.784;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=42332;QR=2276;RO=57;RPL=0;RPP=2298.26;RPPR=126.784;RPR=1057;RUN=1;SAF=1057;SAP=2298.26;SAR=0;SRF=57;SRP=126.784;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:156:6,150:6:235:150:6003:-518.522,-25.4412,0 1/1:180:15,165:15:595:165:6601:-539.903,-0.297531,0 1/1:193:8,185:8:318:185:7374:-634.285,-29.1131,0 1/1:217:15,202:15:601:202:8117:-675.632,-10.8956,0 1/1:208:13,193:13:527:193:7731:-647.613,-14.4411,0 1/1:162:0,162:0:0:162:6506:-585.243,-48.7669,0 dDocent_Contig_2241 37 . C T 86071.2 . AB=0.236254;ABP=2002.94;AC=4;AF=0.333333;AN=12;AO=782;CIGAR=1X2M1X;DP=3310;DPB=3310;DPRA=0;EPP=1701.1;EPPR=654.452;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=29083;QR=11877;RO=300;RPL=0;RPP=1701.1;RPPR=654.452;RPR=782;RUN=1;SAF=782;SAP=1701.1;SAR=0;SRF=300;SRP=654.452;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:540:90,73,376:90:3575:73,376:2690,14841:-1193.96,-1001.09,-1273.43,0,-74.3731,-181.141 1|0:643:63,165,414:63:2499:165,414:6132,16306:-1618.45,-1135.59,-1291.62,-296.112,0,-377.189 0|0:523:65,66,391:65:2581:66,391:2489,15530:-1258.86,-1074.45,-1267.05,0,-8.50214,-94.7721 1|0:515:67,97,350:67:2628:97,350:3600,13813:-1194.77,-920.366,-1107.27,-78.4565,0,-189.212 1|0:613:11,261,340:11:432:261,340:9709,13440:-1861.74,-1070.41,-1027.37,-759.111,0,-692.291 1|0:476:4,120,350:4:162:120,350:4463,13851:-1490.55,-1126.5,-1103.73,-351.902,0,-259.901 dDocent_Contig_2242 98 . N T 61.7453 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=65;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:65:-6.17345,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_2243 98 . N G 339.715 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=11;CIGAR=2X;DP=11;DPB=21;DPRA=0;EPP=26.8965;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=4;PQA=138;PQR=0;PRO=0;QA=365;QR=0;RO=0;RPL=11;RPP=26.8965;RPPR=0;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:2:0,2:0:0:2:65:-6.17329,-0.60206,0 1|1:3:0,3:0:0:3:98:-8.80981,-0.90309,0 .:.:.:.:.:.:.:. 1|1:6:0,6:0:0:6:202:-18.5108,-1.80618,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_2244 98 . N A 84.783 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=85;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:65:-6.17353,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:20:-1.99996,-0.30103,0 dDocent_Contig_2245 7 . C T 10919.6 . AB=0.645724;ABP=108.7;AC=6;AF=0.5;AN=12;AO=370;CIGAR=1X;DP=573;DPB=573;DPRA=0;EPP=806.455;EPPR=441.648;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=14158;QR=7770;RO=202;RPL=0;RPP=806.455;RPPR=441.648;RPR=370;RUN=1;SAF=370;SAP=806.455;SAR=0;SRF=202;SRP=441.648;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:69:22,46:22:845:46:1763:-138.349,0,-55.7904 0/1:76:20,56:20:763:56:2148:-170.67,0,-46.1192 0/1:179:58,121:58:2240:121:4636:-363.404,0,-147.932 0/1:81:25,56:25:959:56:2150:-169.343,0,-62.2403 0/1:92:42,50:42:1619:50:1916:-144.984,0,-118.28 0/1:76:35,41:35:1344:41:1545:-116.437,0,-98.3682 dDocent_Contig_2246 12 . T C 45802.5 . AB=0.579196;ABP=141.276;AC=6;AF=0.5;AN=12;AO=1470;CIGAR=1X3M;DP=2538;DPB=2538.25;DPRA=0;EPP=3195.07;EPPR=1786.61;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=58.1902;NS=6;NUMALT=2;ODDS=0;PAIRED=0.998639;PAIREDR=0.935823;PAO=0;PQA=0;PQR=0;PRO=0;QA=58867;QR=33842;RO=857;RPL=0;RPP=3195.07;RPPR=1863.96;RPR=1470;RUN=1;SAF=1470;SAP=3195.07;SAR=0;SRF=848;SRP=1786.61;SRR=9;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:332:135,0,195:135:5344:0,195:0,7779:-600.007,-640.646,-1068.88,0,-428.284,-369.583 0|1:326:119,0,205:119:4658:0,205:0,8226:-642.032,-677.855,-1057.7,0,-379.939,-318.228 0|1:450:143,0,306:143:5602:0,306:0,12198:-961.399,-1004.45,-1463.6,0,-459.171,-367.056 0|1:364:146,0,215:146:5757:0,215:0,8656:-669.443,-713.393,-1178.35,0,-464.952,-400.231 0|1:609:189,104,314:189:7489:104,314:4067,12584:-979.794,-702.347,-1283.28,0,-277.901,-517.72 0|1:457:125,91,235:125:4992:91,235:3589,9424:-738.802,-481.155,-847.895,0,-98.854,-323.394 dDocent_Contig_2247 8 . A G 32869.5 . AB=0.0472813;ABP=1509.07;AC=0;AF=0;AN=12;AO=40;CIGAR=1X3M1X1M;DP=2542;DPB=2542;DPRA=0;EPP=89.8692;EPPR=1911.73;GTI=0;LEN=1;MEANALT=6.5;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1579;QR=34209;RO=879;RPL=0;RPP=89.8692;RPPR=1911.73;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=879;SRP=1911.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:291:145,0,8,0,137:145:5655:0,8,0,137:0,320,0,5459:-405.306,-448.955,-913.769,-422.596,-887.41,-885.002,-448.955,-913.769,-887.41,-913.769,0,-464.813,-438.453,-464.813,-423.572 0|0:313:109,0,9,14,181:109:4278:0,9,14,181:0,349,531,7175:-556.916,-589.728,-941.56,-561.063,-912.895,-910.186,-546.191,-898.022,-869.357,-893.808,0,-351.841,-323.176,-308.303,-297.354 0|0:266:84,1,23,8,148:84:3264:1,23,8,148:40,927,305,5988:-468.431,-490.422,-758.314,-417.311,-682.208,-678.579,-468.698,-733.594,-660.483,-734.481,0,-264.902,-191.787,-243.177,-223.645 0|0:275:74,0,25,0,174:74:2866:0,25,0,174:0,997,0,6910:-544.909,-567.185,-802.613,-485.081,-720.509,-712.983,-567.185,-802.613,-720.509,-802.613,0,-235.421,-153.315,-235.421,-183.042 0|0:817:303,0,216,78,209:303:11770:0,216,78,209:0,8629,2985,8395:-619.479,-710.691,-1677.78,0,-967.089,-902.066,-465.743,-1432.83,-722.139,-1409.35,-18.961,-986.05,-275.356,-741.101,-923.135 0|0:580:164,39,108,40,226:164:6376:39,108,40,226:1539,4315,1520,9128:-703.128,-625.864,-1138.05,-397.118,-794.415,-888.536,-627.846,-1025.14,-796.397,-1139.73,0,-397.298,-168.549,-399.28,-455.899 dDocent_Contig_2249 108 . C A 42383.2 . AB=0.71403;ABP=448.251;AC=8;AF=0.666667;AN=12;AO=1483;CIGAR=1X;DP=1829;DPB=1829;DPRA=0;EPP=3223.3;EPPR=745.654;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997977;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=51790;QR=11238;RO=342;RPL=0;RPP=3223.3;RPPR=745.654;RPR=1483;RUN=1;SAF=0;SAP=3223.3;SAR=1483;SRF=0;SRP=745.654;SRR=342;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:271:13,258:13:428:258:9030:-773.872,-42.7439,0 1/1:439:13,426:13:445:426:14965:-1306.25,-91.7736,0 0/1:305:48,256:48:1584:256:8909:-709.936,0,-50.9593 0/1:422:82,338:82:2668:338:11769:-932.331,0,-113.59 0/1:241:90,151:90:2999:151:5242:-399.38,0,-197.611 0/1:151:96,54:96:3114:54:1875:-123.769,0,-235.242 dDocent_Contig_2250 9 . C G 98978.1 . AB=0.0522124;ABP=1971.06;AC=0;AF=0;AN=12;AO=59;CIGAR=1X1M16I2M;DP=3968;DPB=18079.8;DPRA=0.5667;EPP=131.127;EPPR=956.287;GTI=0;LEN=1;MEANALT=8;MQM=60;MQMR=59.9909;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.997722;PAO=0;PQA=0;PQR=0;PRO=0;QA=2320;QR=17291;RO=439;RPL=0;RPP=131.127;RPPR=956.287;RPR=59;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=439;SRP=956.287;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:410:64,16,323,0:64:2523:16,323,0:618,11683,0:-934.193,-902.705,-1105.47,0,-156.856,-110.377,-953.459,-1110.29,-207.609,-1161.04 0|0:716:84,0,615,0:84:3295:0,615,0:0,22265,0:-1791.89,-1817.18,-2088.16,0,-271.006,-85.8727,-1817.18,-2088.16,-271.006,-2088.16 0|0:471:51,0,409,0:51:2014:0,409,0:0,15044,0:-1214.41,-1229.77,-1395.5,0,-165.773,-42.6514,-1229.77,-1395.5,-165.773,-1395.5 0|0:720:141,43,497,0:141:5560:43,497,0:1702,18069,0:-1432.86,-1335.22,-1779.74,0,-317.382,-307.852,-1475.3,-1792.68,-457.464,-1932.77 0|0:997:39,0,897,50:39:1532:0,897,50:0,32935,1906:-2824.06,-2835.8,-2961.8,-144.019,-270.024,0,-2679.47,-2805.47,-113.692,-2790.41 0|0:654:60,0,578,1:60:2367:0,578,1:0,21146,10:-1709.61,-1727.68,-1922.43,0,-194.822,-20.8265,-1727.08,-1921.84,-194.227,-1921.53 dDocent_Contig_2251 24 . G T 2498.01 . AB=0.1407;ABP=1859.91;AC=3;AF=0.25;AN=12;AO=318;CIGAR=1X;DP=2961;DPB=2961;DPRA=0;EPP=693.539;EPPR=5740.04;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.990566;PAIREDR=0.998486;PAO=0;PQA=0;PQR=0;PRO=0;QA=11400;QR=103436;RO=2642;RPL=0;RPP=693.539;RPPR=5740.04;RPR=318;RUN=1;SAF=318;SAP=693.539;SAR=0;SRF=2642;SRP=5740.04;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:401:364,37:364:14259:37:1323:0,-1.35764,-1163 0/0:517:502,15:502:19702:15:553:0,-105.53,-1721.59 0/1:488:430,57:430:16827:57:2007:-33.8694,0,-1366.2 0/0:387:354,33:354:13839:33:1157:0,-12.0779,-1140.14 0/1:657:542,115:542:21292:115:4117:-172.875,0,-1716.85 0/1:511:450,61:450:17517:61:2243:-48.2786,0,-1421.42 dDocent_Contig_2252 192 . C T 61.356 . AB=0.109756;ABP=111.478;AC=3;AF=0.25;AN=12;AO=9;CIGAR=1X;DP=162;DPB=162;DPRA=1.025;EPP=22.5536;EPPR=335.246;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.986928;PAO=0;PQA=0;PQR=0;PRO=0;QA=360;QR=6113;RO=153;RPL=9;RPP=22.5536;RPPR=335.246;RPR=0;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=335.246;SRR=153;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:21,4:21:845:4:161:-7.34915,0,-68.8356 0/1:35:32,3:32:1280:3:121:-0.743936,0,-104.928 0/1:22:20,2:20:810:2:78:-0.780117,0,-66.5935 0/0:23:23,0:23:911:0:0:0,-6.92369,-82.2871 0/0:37:37,0:37:1456:0:0:0,-11.1381,-131.279 0/0:20:20,0:20:811:0:0:0,-6.0206,-73.3045 dDocent_Contig_2253 56 . C A 2646.09 . AB=0.164223;ABP=1004.84;AC=3;AF=0.25;AN=12;AO=181;CIGAR=1X;DP=1810;DPB=1810;DPRA=1.13088;EPP=396.047;EPPR=3540.34;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999386;PAO=0;PQA=0;PQR=0;PRO=0;QA=6928;QR=64469;RO=1629;RPL=181;RPP=396.047;RPPR=3540.34;RPR=0;RUN=1;SAF=181;SAP=396.047;SAR=0;SRF=1629;SRP=3540.34;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:391:301,90:301:11829:90:3486:-196.132,0,-946.162 0/1:389:345,44:345:13623:44:1647:-31.3785,0,-1108.04 0/0:180:169,11:169:6744:11:434:0,-14.7731,-567.26 0/1:243:209,34:209:8286:34:1280:-42.3203,0,-672.165 0/0:272:272,0:272:10786:0:0:0,-81.8802,-970.06 0/0:335:333,2:333:13201:2:81:0,-93.1593,-1179.5 dDocent_Contig_2254 61 . G A 483.879 . AB=0.205128;ABP=91.3725;AC=2;AF=0.166667;AN=12;AO=28;CIGAR=1X;DP=366;DPB=366;DPRA=0.64375;EPP=63.8115;EPPR=736.968;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.821429;PAIREDR=0.813609;PAO=0;PQA=0;PQR=0;PRO=0;QA=1119;QR=13328;RO=338;RPL=28;RPP=63.8115;RPPR=736.968;RPR=0;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=338;SRP=736.968;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:85:85,0:85:3363:0:0:0,-25.5875,-302.734 0/0:67:64,3:64:2515:3:121:0,-8.88881,-215.219 0/0:22:21,1:21:846:1:41:0,-2.52809,-72.3586 0/0:75:75,0:75:2968:0:0:0,-22.5772,-267.224 0/1:61:52,9:52:2061:9:363:-14.6715,0,-167.303 0/1:56:41,15:41:1575:15:594:-36.9383,0,-125.131 dDocent_Contig_2255 7 . T G 2463.23 . AB=0.237189;ABP=412.764;AC=5;AF=0.416667;AN=12;AO=175;CIGAR=1X;DP=810;DPB=810;DPRA=0;EPP=383.018;EPPR=1377.55;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=59.9779;NS=6;NUMALT=1;ODDS=0;PAIRED=0.982857;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5508;QR=23957;RO=633;RPL=0;RPP=383.018;RPPR=1377.55;RPR=175;RUN=1;SAF=175;SAP=383.018;SAR=0;SRF=633;SRP=1377.55;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:113:72,40:72:2699:40:1358:-88.3882,0,-208.994 0/1:166:143,23:143:5392:23:687:-12.1241,0,-435.304 0/1:84:61,23:61:2305:23:709:-38.8008,0,-182.374 0/1:130:85,44:85:3200:44:1329:-80.9064,0,-249.138 0/0:127:114,13:114:4323:13:400:0,-1.93702,-352.844 0/1:190:158,32:158:6038:32:1025:-35.3251,0,-486.173 dDocent_Contig_2257 23 . C T 2514.79 . AB=0.220561;ABP=365.873;AC=6;AF=0.5;AN=12;AO=118;CIGAR=1X;DP=535;DPB=535;DPRA=0;EPP=259.244;EPPR=908.514;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9568;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997602;PAO=0;PQA=0;PQR=0;PRO=0;QA=4687;QR=16790;RO=417;RPL=0;RPP=259.244;RPPR=908.514;RPR=118;RUN=1;SAF=118;SAP=259.244;SAR=0;SRF=417;SRP=908.514;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:53:45,8:45:1822:8:323:-13.484,0,-148.231 0/1:103:85,18:85:3432:18:705:-32.7659,0,-277.899 0/1:63:57,6:57:2284:6:234:-2.4641,0,-186.756 0/1:110:91,19:91:3668:19:745:-34.2571,0,-297.015 0/1:119:66,53:66:2644:53:2127:-155.786,0,-202.258 0/1:87:73,14:73:2940:14:553:-23.9203,0,-238.313 dDocent_Contig_2258 11 . C A 879.813 . AB=0.159763;ABP=342.865;AC=1;AF=0.0833333;AN=12;AO=85;CIGAR=1X;DP=2513;DPB=2513;DPRA=1.0565;EPP=187.585;EPPR=5273.17;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=59.9951;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999176;PAO=0;PQA=0;PQR=0;PRO=0;QA=3374;QR=97459;RO=2427;RPL=0;RPP=187.585;RPPR=5273.17;RPR=85;RUN=1;SAF=85;SAP=187.585;SAR=0;SRF=2427;SRP=5273.17;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:459:457,2:457:18245:2:82:0,-130.393,-1632.72 0/0:567:561,6:561:22594:6:244:0,-148.345,-2008.99 0/0:278:277,1:277:11096:1:41:0,-79.5918,-993.764 0/0:400:400,0:400:16124:0:0:0,-120.412,-1449.82 0/0:471:448,22:448:17949:22:884:0,-62.0267,-1534.01 0/1:338:284,54:284:11451:54:2123:-89.5041,0,-927.998 dDocent_Contig_2259 98 . N A 1959.42 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=64;CIGAR=1X;DP=64;DPB=64;DPRA=0;EPP=141.985;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2167;QR=0;RO=0;RPL=64;RPP=141.985;RPPR=0;RPR=0;RUN=1;SAF=64;SAP=141.985;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:35:0,35:0:0:35:1166:-105.238,-10.5361,0 1/1:29:0,29:0:0:29:1001:-90.4027,-8.72987,0 dDocent_Contig_2260 98 . N T 157.863 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=5;CIGAR=3X;DP=5;DPB=7.66667;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=4;PQA=133;PQR=0;PRO=0;QA=172;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:67:-6.03823,-0.60206,0 .:.:.:.:.:.:.:. 1|1:3:0,3:0:0:3:105:-9.44623,-0.90309,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_2262 13 . T C 4986.08 . AB=0.0504484;ABP=1568.82;AC=6;AF=0.5;AN=12;AO=45;CIGAR=1X4M1X3M1X1M;DP=892;DPB=892;DPRA=0;EPP=100.727;EPPR=1216.88;GTI=0;LEN=1;MEANALT=5.83333;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.989343;PAO=0;PQA=0;PQR=0;PRO=0;QA=1716;QR=21884;RO=563;RPL=0;RPP=100.727;RPPR=1225.55;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=562;SRP=1216.88;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:140:73,41,9,9,7:73:2827:41,9,9,7:1567,350,350,278:-106.589,0,-219.886,-99.8324,-203.498,-329.355,-99.801,-203.466,-303.302,-329.324,-105.675,-209.341,-309.177,-309.146,-335.801 0|1:158:99,36,2,6,6:99:3840:36,2,6,6:1382,70,221,238:-83.6399,0,-304.655,-107.749,-309.799,-422.634,-95.3746,-297.425,-405.168,-409.055,-93.8482,-295.9,-403.643,-391.269,-407.531 0|1:203:108,62,2,15,6:108:4220:62,2,15,6:2370,76,573,233:-161.958,0,-328.281,-188.237,-340.713,-534.57,-147.458,-299.936,-488.162,-489.879,-175.323,-327.8,-516.027,-475.249,-520.453 0|1:158:88,48,6,9,3:88:3413:48,6,9,3:1839,226,339,119:-124.447,0,-265.969,-132.423,-261.904,-411.021,-123.16,-252.641,-385.05,-400.855,-141.141,-270.622,-403.032,-393.769,-420.643 0|1:124:106,15,0,1,1:106:4109:15,0,1,1:565,0,38,40:-14.427,0,-333.11,-46.3362,-337.625,-383.916,-43.219,-334.509,-380.8,-380.498,-43.0392,-334.33,-380.621,-377.504,-380.32 0|1:109:89,15,0,5,0:89:3475:15,0,5,0:557,0,195,0:-18.7703,0,-281.149,-45.562,-285.665,-331.238,-29.5284,-269.636,-315.209,-313.704,-45.562,-285.665,-331.238,-315.209,-331.238 dDocent_Contig_2263 45 . T A 4454.25 . AB=0.282875;ABP=270.812;AC=4;AF=0.333333;AN=12;AO=197;CIGAR=1X;DP=994;DPB=994;DPRA=0;EPP=422.149;EPPR=1733.67;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.857868;PAIREDR=0.717691;PAO=0;PQA=0;PQR=0;PRO=0;QA=7652;QR=31787;RO=797;RPL=1;RPP=422.149;RPPR=1733.67;RPR=196;RUN=1;SAF=197;SAP=430.79;SAR=0;SRF=797;SRP=1733.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:205:117,88:117:4695:88:3410:-245.256,0,-360.742 0/1:226:186,40:186:7377:40:1528:-69.7444,0,-595.547 0/1:111:82,29:82:3267:29:1164:-71.6268,0,-260.675 0/1:112:84,28:84:3358:28:1105:-66.0194,0,-268.559 0/0:169:167,2:167:6650:2:74:0,-43.8492,-591.175 0/0:171:161,10:161:6440:10:371:0,-17.738,-545.596 dDocent_Contig_2264 1 . N G 76.8682 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_2265 44 . C T 1086.43 . AB=0.121296;ABP=1348.37;AC=1;AF=0.0833333;AN=12;AO=397;CIGAR=1X;DP=5665;DPB=5665;DPRA=0;EPP=865.085;EPPR=11409.8;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.992443;PAIREDR=0.99981;PAO=0;PQA=0;PQR=0;PRO=0;QA=14861;QR=207125;RO=5257;RPL=0;RPP=865.085;RPPR=11409.8;RPR=397;RUN=1;SAF=397;SAP=865.085;SAR=0;SRF=5257;SRP=11418.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:806:741,63:741:29178:63:2366:0,-28.9819,-2410.46 0/0:983:935,48:935:36901:48:1809:0,-132.863,-3154.81 0/0:688:657,30:657:25912:30:1157:0,-102.78,-2225.5 0/0:888:839,48:839:32959:48:1802:0,-104.776,-2801.13 0/0:1220:1139,77:1139:44913:77:2897:0,-105.475,-3777.23 0/1:1080:946,131:946:37262:131:4830:-110.166,0,-3025.76 dDocent_Contig_2266 98 . N C 157.162 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=159;QR=0;RO=0;RPL=8;RPP=20.3821;RPPR=0;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:83:-7.74541,-0.90309,0 1/1:2:0,2:0:0:2:42:-3.9887,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:27:-2.56496,-0.60206,0 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_2267 10 . T C 52.0017 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=19;CIGAR=1M1X1M;DP=927;DPB=963;DPRA=0.842884;EPP=44.2683;EPPR=1916.08;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=758;QR=34515;RO=881;RPL=0;RPP=44.2683;RPPR=1916.08;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=881;SRP=1916.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:115:115,0,0:115:4489:0,0:0,0:0,-34.6184,-404.014,-34.6184,-404.014,-404.014 0|0:143:135,0,8:135:5305:0,8:0,324:0,-40.639,-476.973,-13.5185,-450.257,-447.848 0|0:82:73,9,0:73:2866:9,0:345,0:-6.72304,0,-233.396,-28.6982,-236.105,-264.42 0|0:161:137,13,11:137:5355:13,11:479,434:0,-2.09259,-438.422,-5.52061,-406.626,-442.476 0|0:187:187,0,0:187:7341:0,0:0,0:0,-56.2926,-660.439,-56.2926,-660.439,-660.439 0|0:239:234,5,0:234:9159:5,0:192,0:0,-54.2962,-806.255,-70.441,-807.76,-823.521 dDocent_Contig_2268 17 . G A 9022.43 . AB=0.204312;ABP=742.684;AC=2;AF=0.166667;AN=12;AO=199;CIGAR=6M1X11M;DP=974;DPB=963.611;DPRA=0;EPP=435.133;EPPR=938.915;GTI=0;LEN=1;MEANALT=5.83333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7858;QR=16817;RO=431;RPL=0;RPP=435.133;RPPR=938.915;RPR=199;RUN=1;SAF=199;SAP=435.133;SAR=0;SRF=431;SRP=938.915;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:119:49,1,21,48:49:1882:1,21,48:40,838,1906:-142.144,-153.599,-307.774,-87.8775,-239.057,-236.031,0,-151.176,-85.4508,-140.022 0|0:123:57,5,7,48:57:2214:5,7,48:194,274,1877:-137.136,-138.356,-318.765,-131.77,-297.745,-311.577,0,-165.973,-159.387,-167.463 0|0:190:94,11,14,53:94:3680:11,14,53:429,550,2019:-137.258,-130.291,-429.574,-120.318,-387.65,-418.699,0,-267.331,-257.358,-286.639 0|0:174:69,2,38,54:69:2694:2,38,54:80,1471,2155:-156.713,-170.894,-391.748,-56.6683,-271.533,-266.684,0,-214.87,-100.642,-205.205 0|1:172:83,8,61,12:83:3267:8,61,12:302,2436,453:-175.668,-175.904,-442.254,0,-244.027,-250.413,-163.546,-407.554,-231.668,-428.691 0|1:196:79,0,58,54:79:3080:0,58,54:0,2289,2140:-164.546,-188.328,-441.477,0,-253.149,-235.689,-12.1936,-265.343,-77.0139,-249.088 dDocent_Contig_2269 10 . C T 12551.5 . AB=0.493039;ABP=3.37305;AC=6;AF=0.5;AN=12;AO=425;CIGAR=1X;DP=862;DPB=862;DPRA=0;EPP=925.886;EPPR=951.944;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995423;PAO=0;PQA=0;PQR=0;PRO=0;QA=16947;QR=17480;RO=437;RPL=0;RPP=925.886;RPPR=951.944;RPR=425;RUN=1;SAF=425;SAP=925.886;SAR=0;SRF=437;SRP=951.944;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:119:68,51:68:2708:51:2054:-149.217,0,-208.016 0/1:126:52,74:52:2065:74:2950:-227.668,0,-148.111 0/1:82:39,43:39:1573:43:1740:-132.128,0,-117.117 0/1:123:79,44:79:3186:44:1735:-119.342,0,-249.771 0/1:204:96,108:96:3822:108:4272:-323.029,0,-282.573 0/1:208:103,105:103:4126:105:4196:-314.985,0,-308.686 dDocent_Contig_2270 96 . C A 186.395 . AB=0.36;ABP=7.26639;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=378;DPB=378;DPRA=0.586207;EPP=29.068;EPPR=797.769;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=355;QR=12392;RO=366;RPL=12;RPP=29.068;RPPR=797.769;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=366;SRP=797.769;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:23,1:23:778:1:32:0,-4.02541,-67.1356 0/1:25:16,9:16:554:9:304:-20.1624,0,-42.6622 0/0:28:28,0:28:916:0:0:0,-8.42884,-82.7389 0/0:32:31,1:31:1046:1:12:0,-8.43297,-93.2454 0/0:146:146,0:146:4959:0:0:0,-43.9504,-446.497 0/0:123:122,1:122:4139:1:7:0,-36.3267,-372.022 dDocent_Contig_2271 98 . N A 422.746 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=16;CIGAR=1X;DP=17;DPB=17;DPRA=0;EPP=37.7539;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.9375;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=447;QR=0;RO=0;RPL=16;RPP=37.7539;RPPR=0;RPR=0;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:128:-11.8364,-1.20412,0 1/1:1:0,1:0:0:1:9:-0.899997,-0.30103,0 1/1:5:0,5:0:0:5:148:-13.6129,-1.50515,0 1/1:2:0,1:0:0:1:35:-3.2037,-0.30103,0 1/1:3:0,3:0:0:3:77:-7.18463,-0.90309,0 1/1:2:0,2:0:0:2:50:-4.74869,-0.60206,0 dDocent_Contig_2272 192 . G A 113.049 . AB=0.194444;ABP=32.2045;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=285;DPB=285;DPRA=0.722892;EPP=18.2106;EPPR=606.68;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996403;PAO=0;PQA=0;PQR=0;PRO=0;QA=259;QR=10992;RO=278;RPL=7;RPP=18.2106;RPPR=606.68;RPR=0;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=606.68;SRR=278;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1212:0:0:0,-9.0309,-109.35 0/1:36:29,7:29:1146:7:259:-12.8278,0,-92.5814 0/0:45:45,0:45:1802:0:0:0,-13.5463,-162.389 0/0:81:81,0:81:3225:0:0:0,-24.3834,-290.317 0/0:66:66,0:66:2613:0:0:0,-19.868,-235.287 0/0:27:27,0:27:994:0:0:0,-8.12781,-89.733 dDocent_Contig_2273 1 . N G 190.186 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=187;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:37:-3.69783,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:39:-3.89656,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:74:-7.02588,-0.60206,0 1/1:1:0,1:0:0:1:37:-3.69783,-0.30103,0 dDocent_Contig_2274 15 . T A 71.0713 . AB=0.146341;ABP=47.552;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=251;DPB=251;DPRA=1.22124;EPP=24.725;EPPR=517.649;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.2;PAIREDR=0.552743;PAO=0;PQA=0;PQR=0;PRO=0;QA=385;QR=8863;RO=237;RPL=0;RPP=24.725;RPPR=517.649;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=237;SRP=517.649;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:38,0:38:1418:0:0:0,-11.4391,-127.673 0/0:46:43,3:43:1639:3:116:0,-3.03039,-136.943 0/1:41:35,6:35:1277:6:229:-8.63001,0,-102.859 0/0:51:49,1:49:1830:1:40:0,-11.3056,-161.081 0/0:38:38,0:38:1415:0:0:0,-11.4391,-127.611 0/0:34:34,0:34:1284:0:0:0,-10.235,-115.83 dDocent_Contig_2275 16 . C T 976.022 . AB=0.0682196;ABP=976.238;AC=4;AF=0.333333;AN=12;AO=61;CIGAR=1M1X;DP=1058;DPB=1058;DPRA=0;EPP=135.47;EPPR=1926.93;GTI=0;LEN=1;MEANALT=2.83333;MQM=49.4262;MQMR=58.3014;NS=6;NUMALT=3;ODDS=1.11022e-16;PAIRED=0.262295;PAIREDR=0.1693;PAO=0;PQA=0;PQR=0;PRO=0;QA=2424;QR=35439;RO=886;RPL=0;RPP=135.47;RPPR=1926.93;RPR=61;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=886;SRP=1926.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:123:98,15,3,7:98:3899:15,3,7:611,115,266:-20.974,0,-316.341,-41.7667,-312.148,-361.652,-36.1072,-306.459,-348.158,-354.758 0|1:170:132,19,4,14:132:5272:19,4,14:761,163,548:-22.9871,0,-427.889,-56.2278,-427.1,-488.59,-19.439,-390.33,-446.515,-448.81 0|1:143:116,15,3,9:116:4650:15,3,9:600,120,358:-14.508,0,-378.216,-40.1271,-373.43,-421.95,-20.0037,-353.308,-393.429,-400.022 0|1:165:127,26,1,11:127:5087:26,1,11:1028,37,446:-46.3549,0,-411.23,-81.5595,-416.03,-500.318,-48.0075,-382.481,-464.043,-463.758 0|0:220:203,0,9,8:203:8147:0,9,8:0,349,324:0,-61.1091,-721.186,-42.4829,-702.493,-699.784,-34.6033,-694.744,-676.051,-692.336 0|0:237:210,0,15,12:210:8384:0,15,12:0,600,482:0,-63.2163,-693.468,-19.4938,-649.725,-645.21,-24.2525,-654.519,-610.776,-650.906 dDocent_Contig_2276 14 . C T 4532.87 . AB=0.0391389;ABP=945.714;AC=0;AF=0;AN=12;AO=24;CIGAR=1X1M1X;DP=840;DPB=840;DPRA=1.37716;EPP=55.1256;EPPR=1366.69;GTI=0;LEN=1;MEANALT=2;MQM=47.4167;MQMR=59.078;NS=6;NUMALT=2;ODDS=0;PAIRED=0.166667;PAIREDR=0.566879;PAO=0;PQA=0;PQR=0;PRO=0;QA=938;QR=25105;RO=628;RPL=0;RPP=55.1256;RPPR=1366.69;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=628;SRP=1366.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:135:108,3,24:108:4316:3,24:115,965:-46.8114,-74.4925,-428.482,0,-350.228,-347.849 0|0:200:131,8,61:131:5218:8,61:319,2458:-160.314,-173.701,-598.257,0,-400.918,-408.603 0|0:85:59,0,26:59:2352:0,26:0,1053:-64.8849,-82.6456,-276.318,0,-194.061,-186.235 0|0:176:97,9,70:97:3891:9,70:360,2802:-188.498,-188.21,-505.968,0,-290.972,-299.386 0|0:128:120,4,4:120:4803:4,4:144,133:0,-25.1124,-419.422,-25.3749,-409.876,-419.677 0|0:116:113,0,3:113:4525:0,3:0,122:0,-34.0164,-406.673,-23.5617,-396.624,-395.721 dDocent_Contig_2277 13 . T G 103.939 . AB=0.125;ABP=100.727;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=410;DPB=410;DPRA=1.21212;EPP=24.725;EPPR=871.599;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=396;QR=15335;RO=400;RPL=0;RPP=24.725;RPPR=871.599;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=400;SRP=871.599;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:55:55,0:55:2094:0:0:0,-16.5566,-188.675 0/0:46:46,0:46:1739:0:0:0,-13.8474,-156.747 0/0:45:45,0:45:1731:0:0:0,-13.5463,-156.038 0/1:80:70,10:70:2751:10:396:-11.9168,0,-223.653 0/0:152:152,0:152:5803:0:0:0,-45.7566,-522.197 0/0:32:32,0:32:1217:0:0:0,-9.63296,-109.819 dDocent_Contig_2278 11 . T C 423.095 . AB=0.0895522;ABP=101.051;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X1M1X;DP=253;DPB=253;DPRA=0.360215;EPP=16.0391;EPPR=498.106;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=241;QR=8854;RO=228;RPL=0;RPP=16.0391;RPPR=498.106;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=228;SRP=498.106;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:21:18,2,1:18:699:2,1:80,40:-1.17162,0,-56.8209,-3.29508,-54.1272,-60.4175 0|0:13:13,0,0:13:511:0,0:0,0:0,-3.91339,-46.338,-3.91339,-46.338,-46.338 0|0:22:9,2,11:9:353:2,11:80,444:-33.8951,-30.0147,-58.4385,0,-22.433,-25.7132 0|0:24:17,2,5:17:658:2,5:81,203:-11.6256,-10.0642,-63.4986,0,-47.354,-52.5299 0|0:118:116,0,2:116:4506:0,2:0,81:0,-34.9195,-405.151,-27.8358,-398.472,-397.87 0|0:55:55,0,0:55:2127:0,0:0,0:0,-16.5566,-191.642,-16.5566,-191.642,-191.642 dDocent_Contig_2279 8 . A G 542.225 . AB=0.0912409;ABP=400.659;AC=2;AF=0.166667;AN=12;AO=27;CIGAR=2X1M1X;DP=379;DPB=379;DPRA=1.15357;EPP=61.6401;EPPR=702.224;GTI=0;LEN=1;MEANALT=2.2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.993789;PAO=0;PQA=0;PQR=0;PRO=0;QA=1010;QR=12497;RO=322;RPL=0;RPP=61.6401;RPPR=702.224;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=322;SRP=702.224;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:45:32,10,2:32:1240:10,2:370,78:-20.6174,0,-98.8534,-23.8359,-95.4519,-125.114 0|1:90:80,9,0:80:3098:9,0:337,0:-3.56434,0,-251.85,-27.6467,-254.559,-282.156 0|0:49:47,2,0:47:1841:2,0:78,0:0,-7.347,-158.522,-14.1484,-159.124,-165.536 0|0:58:47,4,5:47:1833:4,5:154,191:-1.52148,-3.02433,-152.497,0,-138.03,-149.17 0|0:56:54,0,0:54:2088:0,0:0,0:0,-16.2556,-187.75,-16.2556,-187.75,-187.75 0|0:81:62,2,17:62:2397:2,17:71,656:-35.2373,-48.1197,-244.397,0,-191.126,-191.792 dDocent_Contig_2280 9 . A C 1916.81 . AB=0.101597;ABP=5268.13;AC=4;AF=0.333333;AN=12;AO=515;CIGAR=1X;DP=5466;DPB=5466;DPRA=0;EPP=1121.32;EPPR=10710.5;GTI=0;LEN=1;MEANALT=2;MQM=59.9903;MQMR=59.997;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999392;PAO=0;PQA=0;PQR=0;PRO=0;QA=19811;QR=186365;RO=4931;RPL=0;RPP=1121.32;RPPR=10710.5;RPR=515;RUN=1;SAF=515;SAP=1121.32;SAR=0;SRF=4931;SRP=10710.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:726:660,63:660:24911:63:2424:-0.341571,0,-2022.66 0/1:952:851,99:851:32090:99:3818:-57.3565,0,-2599.92 0/0:873:799,74:799:30332:74:2837:0,-7.29832,-2472.61 0/1:832:757,74:757:28630:74:2856:-6.78395,0,-2324.69 0/1:1309:1156,152:1156:43694:152:5855:-132.761,0,-3535.7 0/0:774:708,53:708:26708:53:2021:0,-47.3441,-2220.16 dDocent_Contig_2281 57 . A G 131.826 . AB=0.189189;ABP=34.0565;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=290;DPB=290;DPRA=0.9;EPP=20.3821;EPPR=615.366;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.971631;PAO=0;PQA=0;PQR=0;PRO=0;QA=324;QR=11081;RO=282;RPL=8;RPP=20.3821;RPPR=615.366;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=282;SRP=615.366;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:50,0:50:1960:0:0:0,-15.0515,-176.61 0/0:31:31,0:31:1230:0:0:0,-9.33193,-110.979 0/0:55:55,0:55:2127:0:0:0,-16.5566,-191.614 0/0:64:64,0:64:2519:0:0:0,-19.2659,-226.863 0/1:37:30,7:30:1174:7:283:-14.7055,0,-94.8006 0/0:53:52,1:52:2071:1:41:0,-11.86,-182.481 dDocent_Contig_2282 98 . N G 909.503 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=31;CIGAR=1X;DP=31;DPB=31;DPRA=0;EPP=70.3259;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=3.38813e-21;PAIRED=0.967742;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=980;QR=0;RO=0;RPL=31;RPP=70.3259;RPPR=0;RPR=0;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:105:-9.79616,-0.90309,0 1/1:9:0,9:0:0:9:275:-25.0484,-2.70927,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:14:0,14:0:0:14:443:-40.1748,-4.21442,0 1/1:2:0,2:0:0:2:68:-6.45788,-0.60206,0 1/1:2:0,2:0:0:2:54:-5.12867,-0.60206,0 dDocent_Contig_2283 9 . C T 119.061 . AB=0.113636;ABP=117.111;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1M7I2M1X2M1X;DP=608;DPB=623.429;DPRA=1.08333;EPP=35.5824;EPPR=1062.69;GTI=0;LEN=1;MEANALT=3.75;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.985656;PAO=0;PQA=0;PQR=0;PRO=0;QA=583;QR=18648;RO=488;RPL=0;RPP=35.5824;RPPR=1062.69;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=488;SRP=1062.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:60:42,1:42:1602:1:40:0,-9.34711,-140.471 0|1:88:61,10:61:2321:10:387:-13.429,0,-187.355 0|0:128:120,0:120:4570:0:0:0,-36.1236,-410.985 0|0:103:77,3:77:2954:3:119:0,-13.381,-254.951 0|0:165:143,1:143:5477:1:37:0,-40.0212,-489.206 0|0:64:45,0:45:1724:0:0:0,-13.5463,-155.038 dDocent_Contig_2284 149 . N G 112.805 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=121;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:121:-11.28,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_2285 27 . C A 15840 . AB=0.210412;ABP=2675.55;AC=6;AF=0.5;AN=12;AO=772;CIGAR=1X;DP=3669;DPB=3669;DPRA=0;EPP=1679.39;EPPR=6289.42;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=1;PAIREDR=0.997237;PAO=0;PQA=0;PQR=0;PRO=0;QA=30001;QR=113359;RO=2895;RPL=0;RPP=1679.39;RPPR=6289.42;RPR=772;RUN=1;SAF=772;SAP=1679.39;SAR=0;SRF=2895;SRP=6289.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:436:384,52:384:14977:52:1986:-47.6957,0,-1215.62 0/1:453:387,65:387:15186:65:2496:-88.3134,0,-1229.19 0/1:395:308,86:308:11991:86:3324:-180.528,0,-959.731 0/1:595:464,131:464:18229:131:5057:-275.944,0,-1460.13 0/1:954:789,165:789:30915:165:6414:-289.883,0,-2492.56 0/1:836:563,273:563:22061:273:10724:-712.861,0,-1732.07 dDocent_Contig_2286 98 . N G 190.551 . AB=0;ABP=0;AC=6;AF=0.75;AN=8;AO=11;CIGAR=1X;DP=13;DPB=13;DPRA=4;EPP=26.8965;EPPR=0;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=198;QR=0;RO=0;RPL=11;RPP=26.8965;RPPR=0;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:74:-6.8446,-1.20412,0 1/1:4:0,4:0:0:4:62:-5.73485,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 0/0:1:0,0:0:0:0:0:0,0,0 1/1:4:0,3:0:0:3:62:-5.6966,-0.90309,0 dDocent_Contig_2287 98 . N G 263.481 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=9;CIGAR=2X;DP=9;DPB=131.5;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0;PAO=161;PQA=4409;PQR=0;PRO=0;QA=285;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:4:0,4:0:0:4:140:-12.6009,-1.20412,0 1|1:1:0,1:0:0:1:35:-3.15103,-0.30103,0 1|1:2:0,2:0:0:2:42:-3.7752,-0.60206,0 .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:68:-6.12096,-0.60206,0 dDocent_Contig_2288 139 . T G 12295.9 . AB=0.695946;ABP=101.724;AC=8;AF=0.666667;AN=12;AO=371;CIGAR=1X;DP=461;DPB=461;DPRA=0;EPP=808.627;EPPR=196.271;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.927224;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=14724;QR=3379;RO=89;RPL=0;RPP=808.627;RPPR=196.271;RPR=371;RUN=1;SAF=0;SAP=808.627;SAR=371;SRF=0;SRP=196.271;SRR=89;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:94:35,59:35:1343:59:2349:-183.27,0,-92.827 0/1:30:6,24:6:208:24:943:-76.1356,0,-10.0154 0/1:113:40,73:40:1523:73:2864:-223.841,0,-103.284 0/1:59:8,50:8:305:50:1966:-159.293,0,-9.96413 1/1:94:0,94:0:0:94:3745:-337.048,-28.2968,0 1/1:71:0,71:0:0:71:2857:-257.225,-21.3731,0 dDocent_Contig_2289 98 . N G 158.482 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=160;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:94:-8.77109,-0.90309,0 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_2290 27 . C T 23465 . AB=0.0842105;ABP=288.319;AC=0;AF=0;AN=12;AO=16;CIGAR=1X2M1X;DP=1669;DPB=1668.75;DPRA=0;EPP=37.7539;EPPR=1846.59;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=633;QR=33448;RO=849;RPL=0;RPP=37.7539;RPPR=1846.59;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=849;SRP=1846.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:151:91,0,59:91:3561:0,59:0,2350:-166.091,-193.485,-486.26,0,-292.771,-275.01 0|0:283:181,0,101:181:7156:0,101:0,3940:-269.573,-324.06,-912.935,0,-589.114,-558.71 0|0:290:202,0,87:202:7989:0,87:0,3502:-227.87,-288.678,-946.106,0,-657.497,-631.307 0|0:190:154,16,19:154:6078:16,19:633,764:-16.6121,-10.8763,-506.148,0,-448.003,-494.376 0|0:399:139,0,259:139:5456:0,259:0,10349:-810.521,-852.364,-1301.06,0,-448.687,-370.72 0|0:356:82,0,271:82:3208:0,271:0,10827:-867.059,-891.744,-1155.47,0,-263.729,-182.15 dDocent_Contig_2291 15 . G C 143888 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=4144;CIGAR=1X;DP=4262;DPB=4262;DPRA=0;EPP=8958.21;EPPR=257.073;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.8938;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997104;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=164868;QR=4609;RO=117;RPL=0;RPP=9001.59;RPPR=257.073;RPR=4144;RUN=1;SAF=4139;SAP=8958.21;SAR=5;SRF=117;SRP=257.073;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:544:7,537:7:281:537:21225:-1875.2,-138.098,0 1/1:728:39,689:39:1538:689:27367:-2322.02,-80.4817,0 1/1:702:49,653:49:1925:653:26090:-2172.36,-37.8747,0 1/1:651:22,629:22:865:629:25053:-2174.47,-117.811,0 1/1:848:0,847:0:0:847:33769:-3027.86,-254.972,0 1/1:789:0,789:0:0:789:31364:-2816.05,-237.513,0 dDocent_Contig_2292 7 . C T 6308.99 . AB=0.465863;ABP=8.05091;AC=6;AF=0.5;AN=12;AO=232;CIGAR=1X;DP=498;DPB=498;DPRA=0;EPP=506.792;EPPR=580.622;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.844828;PAIREDR=0.868421;PAO=0;PQA=0;PQR=0;PRO=0;QA=8782;QR=10161;RO=266;RPL=0;RPP=506.792;RPPR=580.622;RPR=232;RUN=1;SAF=232;SAP=506.792;SAR=0;SRF=266;SRP=580.622;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:74:34,40:34:1297:40:1500:-112.997,0,-94.7421 0/1:89:38,51:38:1471:51:1942:-148.232,0,-105.874 0/1:54:25,29:25:938:29:1085:-81.6937,0,-68.471 0/1:101:59,42:59:2259:42:1600:-113.862,0,-173.125 0/1:97:51,46:51:1922:46:1749:-128.466,0,-144.012 0/1:83:59,24:59:2274:24:906:-56.8694,0,-179.891 dDocent_Contig_2293 181 . G A 798.839 . AB=0.259542;ABP=68.8009;AC=3;AF=0.25;AN=12;AO=37;CIGAR=1X;DP=263;DPB=263;DPRA=1.04706;EPP=83.3548;EPPR=493.763;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.810811;PAIREDR=0.676991;PAO=0;PQA=0;PQR=0;PRO=0;QA=1477;QR=8954;RO=226;RPL=37;RPP=83.3548;RPPR=493.763;RPR=0;RUN=1;SAF=0;SAP=83.3548;SAR=37;SRF=0;SRP=493.763;SRR=226;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:44:34,10:34:1349:10:404:-23.4751,0,-108.418 0/0:47:44,3:44:1756:3:105:0,-4.35761,-148.458 0/1:36:24,12:24:963:12:478:-32.532,0,-76.1308 0/1:51:39,12:39:1548:12:490:-29.0986,0,-124.205 0/0:52:52,0:52:2042:0:0:0,-15.6536,-183.963 0/0:33:33,0:33:1296:0:0:0,-9.93399,-116.9 dDocent_Contig_2294 9 . C G 1182.97 . AB=0.165948;ABP=452.748;AC=3;AF=0.25;AN=12;AO=80;CIGAR=1X;DP=792;DPB=792;DPRA=0.931429;EPP=176.728;EPPR=1549.1;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=58.6039;NS=6;NUMALT=1;ODDS=0;PAIRED=0.9875;PAIREDR=0.820225;PAO=0;PQA=0;PQR=0;PRO=0;QA=3031;QR=27342;RO=712;RPL=0;RPP=176.728;RPPR=1549.1;RPR=80;RUN=1;SAF=80;SAP=176.728;SAR=0;SRF=712;SRP=1549.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:101:99,2:99:3787:2:78:0,-23.0006,-330.899 0/1:150:135,15:135:5149:15:581:-7.47853,0,-410.84 0/0:140:140,0:140:5385:0:0:0,-42.1442,-480.171 0/0:87:86,1:86:3314:1:39:0,-22.293,-293.485 0/1:166:135,31:135:5199:31:1172:-55.8046,0,-417.438 0/1:148:117,31:117:4508:31:1161:-60.2356,0,-351.047 dDocent_Contig_2295 38 . T A 36.3896 . AB=0.097561;ABP=176.04;AC=3;AF=0.25;AN=12;AO=13;CIGAR=1X;DP=221;DPB=221;DPRA=1.25397;EPP=31.2394;EPPR=454.677;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995192;PAO=0;PQA=0;PQR=0;PRO=0;QA=527;QR=8275;RO=208;RPL=0;RPP=31.2394;RPPR=454.677;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=208;SRP=454.677;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:34,0:34:1322:0:0:0,-10.235,-119.238 0/1:33:29,4:29:1166:4:163:-5.12444,0,-95.2817 0/1:68:62,6:62:2444:6:241:-1.59605,0,-199.619 0/1:22:20,2:20:812:2:82:-1.15702,0,-66.7723 0/0:29:29,0:29:1167:0:0:0,-8.72987,-105.309 0/0:35:34,1:34:1364:1:41:0,-6.44148,-118.923 dDocent_Contig_2296 1 . N G 114.653 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:123:-11.4648,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_2297 1 . N G 194.524 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=204;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:123:-11.4648,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_2298 16 . A G 37908.6 . AB=0.0435685;ABP=2619.59;AC=0;AF=0;AN=12;AO=63;CIGAR=2X;DP=1772;DPB=1772;DPRA=0;EPP=139.813;EPPR=1099.6;GTI=0;LEN=1;MEANALT=2.4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2469;QR=19983;RO=505;RPL=0;RPP=139.813;RPPR=1099.6;RPR=63;RUN=1;SAF=63;SAP=139.813;SAR=0;SRF=505;SRP=1099.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:272:63,6,202:63:2504:6,202:227,8013:-640.632,-640.989,-845.328,0,-187.575,-145.374 0|0:290:58,10,221:58:2278:10,221:399,8816:-708.55,-693.149,-877.488,0,-154.49,-120.824 0|0:381:123,24,234:123:4878:24,234:949,9390:-736.632,-695.565,-1089.86,0,-323.425,-331.078 0|0:238:60,17,161:60:2371:17,161:655,6434:-511.877,-476.165,-666.144,0,-141.332,-146.64 0|0:326:79,0,247:79:3154:0,247:0,9870:-789.541,-813.323,-1073.09,0,-260.163,-185.809 0|0:265:122,6,137:122:4798:6,137:239,5482:-414.845,-431.89,-824.72,0,-374.954,-353.394 dDocent_Contig_2299 43 . G T 63105.8 . AB=0.443562;ABP=138.801;AC=6;AF=0.5;AN=12;AO=2177;CIGAR=1X;DP=4908;DPB=4908;DPRA=0;EPP=4730.31;EPPR=5920.27;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999633;PAO=0;PQA=0;PQR=0;PRO=0;QA=86732;QR=107722;RO=2725;RPL=0;RPP=4730.31;RPPR=5920.27;RPR=2177;RUN=1;SAF=2177;SAP=4730.31;SAR=0;SRF=2725;SRP=5920.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:690:454,234:454:18072:234:9296:-628.611,0,-1417.53 0/1:911:649,261:649:25652:261:10401:-661.294,0,-2032.37 0/1:679:383,296:383:15052:296:11798:-856.589,0,-1149.13 0/1:667:346,320:346:13694:320:12776:-948.006,0,-1030.58 0/1:1112:540,571:540:21289:571:22752:-1710.86,0,-1579.39 0/1:849:353,495:353:13963:495:19709:-1516.44,0,-999.946 dDocent_Contig_2300 11 . A C 116.44 . AB=0.131868;ABP=110.128;AC=3;AF=0.25;AN=12;AO=15;CIGAR=1X;DP=170;DPB=170;DPRA=1.34545;EPP=35.5824;EPPR=339.589;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.733333;PAIREDR=0.896774;PAO=0;PQA=0;PQR=0;PRO=0;QA=599;QR=6095;RO=155;RPL=0;RPP=35.5824;RPPR=339.589;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=155;SRP=339.589;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:25,1:25:972:1:40:0,-3.8311,-83.7827 0/1:34:30,4:30:1190:4:163:-4.82341,0,-97.1421 0/0:31:29,2:29:1157:2:80:0,-1.74014,-96.8189 0/1:22:18,4:18:702:4:161:-8.25282,0,-56.8861 0/0:22:22,0:22:856:0:0:0,-6.62266,-77.3487 0/1:35:31,4:31:1218:4:155:-3.78831,0,-99.3582 dDocent_Contig_2301 49 . A T 114555 . AB=0.798708;ABP=1562.33;AC=9;AF=0.75;AN=12;AO=3839;CIGAR=1M1D9M1X;DP=4309;DPB=3985.67;DPRA=0;EPP=8321.93;EPPR=832.513;GTI=0;LEN=1;MEANALT=6.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=135040;QR=14801;RO=382;RPL=2;RPP=8321.93;RPPR=832.513;RPR=3837;RUN=1;SAF=3839;SAP=8339.29;SAR=0;SRF=382;SRP=832.513;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:618:115,479:115:4481:479:16977:-1348.22,0,-224.124 0|1:692:127,546:127:4929:546:19196:-1523.98,0,-240.598 1|1:444:27,402:27:1060:402:14257:-1187.04,-33.8291,0 0|1:702:113,582:113:4331:582:20397:-1625.49,0,-180.285 1|1:1001:0,989:0:0:989:34534:-3106.35,-297.719,0 1|1:852:0,841:0:0:841:29679:-2669.6,-253.166,0 dDocent_Contig_2302 15 . G C 431.322 . AB=0.181102;ABP=115.192;AC=2;AF=0.166667;AN=12;AO=37;CIGAR=1X;DP=504;DPB=504;DPRA=1.02927;EPP=83.3548;EPPR=1017.09;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995717;PAO=0;PQA=0;PQR=0;PRO=0;QA=1501;QR=18486;RO=467;RPL=0;RPP=83.3548;RPPR=1017.09;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=467;SRP=1017.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:82:82,0:82:3245:0:0:0,-24.6845,-292.116 0/1:86:69,17:69:2710:17:691:-36.6299,0,-218.131 0/1:41:35,6:35:1413:6:241:-9.72407,0,-115.077 0/0:68:65,3:65:2482:3:123:0,-9.00525,-212.068 0/0:89:82,7:82:3247:7:284:0,-0.857882,-266.362 0/0:138:134,4:134:5389:4:162:0,-26.5752,-469.87 dDocent_Contig_2303 43 . T C 756.366 . AB=0.193069;ABP=168.3;AC=5;AF=0.416667;AN=12;AO=39;CIGAR=1X;DP=256;DPB=256;DPRA=0.748148;EPP=87.6977;EPPR=474.22;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.846154;PAIREDR=0.829493;PAO=0;PQA=0;PQR=0;PRO=0;QA=1561;QR=8646;RO=217;RPL=0;RPP=87.6977;RPPR=474.22;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=217;SRP=474.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:23,8:23:924:8:311:-19.0172,0,-74.1319 0/1:63:51,12:51:2022:12:485:-25.0366,0,-163.199 0/1:49:35,14:35:1411:14:569:-36.8014,0,-112.49 0/1:25:23,2:23:886:2:81:-0.159984,0,-72.5126 0/1:34:31,3:31:1243:3:115:-0.487365,0,-101.9 0/0:54:54,0:54:2160:0:0:0,-16.2556,-194.571 dDocent_Contig_2304 107 . N G 322.761 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=10;CIGAR=1X;DP=10;DPB=10;DPRA=0;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=337;QR=0;RO=0;RPL=0;RPP=24.725;RPPR=0;RPR=10;RUN=1;SAF=0;SAP=24.725;SAR=10;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:135:-12.4836,-1.20412,0 1/1:4:0,4:0:0:4:134:-12.3913,-1.20412,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_2305 7 . T A 7678.46 . AB=0.183347;ABP=2074.07;AC=5;AF=0.416667;AN=12;AO=436;CIGAR=1X;DP=3089;DPB=3089;DPRA=0.668917;EPP=949.772;EPPR=5753.07;GTI=0;LEN=1;MEANALT=1.6;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999245;PAO=0;PQA=0;PQR=0;PRO=0;QA=16576;QR=101006;RO=2648;RPL=0;RPP=949.772;RPPR=5753.07;RPR=436;RUN=1;SAF=436;SAP=949.772;SAR=0;SRF=2648;SRP=5753.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:407:331,75:331:12611:75:2860:-135.111,0,-1012.01 0/1:500:402,98:402:15386:98:3735:-185.755,0,-1233.49 0/1:423:353,70:353:13466:70:2634:-109.911,0,-1084.02 0/1:488:370,117:370:14111:117:4469:-255.56,0,-1122.65 0/0:711:709,0:709:27072:0:0:0,-213.43,-2434.53 0/1:560:483,76:483:18360:76:2878:-90.7311,0,-1483.01 dDocent_Contig_2306 22 . C T 7478.97 . AB=0.1787;ABP=1990.04;AC=4;AF=0.333333;AN=12;AO=398;CIGAR=1X;DP=3220;DPB=3220;DPRA=0.977331;EPP=867.256;EPPR=6130.91;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.999291;PAO=0;PQA=0;PQR=0;PRO=0;QA=15885;QR=113576;RO=2822;RPL=0;RPP=867.256;RPPR=6130.91;RPR=398;RUN=1;SAF=398;SAP=867.256;SAR=0;SRF=2822;SRP=6130.91;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:600:544,56:544:21874:56:2214:-18.8065,0,-1786.08 0/1:664:511,153:511:20586:153:6098:-348.694,0,-1651.04 0/1:347:253,94:253:10173:94:3759:-233.856,0,-810.404 0/1:605:512,93:512:20590:93:3732:-153.762,0,-1669.16 0/0:547:547,0:547:21990:0:0:0,-164.663,-1977.13 0/0:457:455,2:455:18363:2:82:0,-129.791,-1643.28 dDocent_Contig_2307 32 . T A 6631.93 . AB=0.183308;ABP=1704.35;AC=3;AF=0.25;AN=12;AO=471;CIGAR=2X;DP=3918;DPB=3918;DPRA=0;EPP=1025.77;EPPR=7477.22;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=0.997877;PAIREDR=0.997676;PAO=0;PQA=0;PQR=0;PRO=0;QA=18406;QR=136541;RO=3442;RPL=0;RPP=1025.77;RPPR=7477.22;RPR=471;RUN=1;SAF=471;SAP=1025.77;SAR=0;SRF=3442;SRP=7477.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:597:567,30:567:22466:30:1190:0,-72.3351,-1912.72 0|0:662:630,31:630:25025:31:1206:0,-90.5702,-2141.32 0|1:506:435,70:435:17259:70:2681:-89.009,0,-1399.53 0|1:633:574,58:574:22742:58:2277:-14.4528,0,-1854.25 0|1:814:582,230:582:23060:230:9002:-564.953,0,-1828.72 0|0:706:654,52:654:25989:52:2050:0,-27.8346,-2152.1 dDocent_Contig_2308 11 . T C 196.972 . AB=0.296296;ABP=12.7417;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=206;DPB=206;DPRA=1.27586;EPP=29.068;EPPR=424.276;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0833333;PAIREDR=0.458763;PAO=0;PQA=0;PQR=0;PRO=0;QA=471;QR=7747;RO=194;RPL=0;RPP=29.068;RPPR=424.276;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=194;SRP=424.276;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:33,1:33:1307:1:36:0,-6.63674,-114.3 0/0:44:43,1:43:1724:1:41:0,-9.15075,-151.283 0/1:27:19,8:19:752:8:322:-21.22,0,-59.8701 0/0:43:41,2:41:1627:2:72:0,-6.10997,-139.824 0/0:24:24,0:24:958:0:0:0,-7.22472,-86.5191 0/0:34:34,0:34:1379:0:0:0,-10.235,-124.361 dDocent_Contig_2309 18 . G C 2313.44 . AB=0.35124;ABP=49.5265;AC=2;AF=0.166667;AN=12;AO=106;CIGAR=1X;DP=654;DPB=654;DPRA=0;EPP=233.186;EPPR=1188.63;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.924528;PAIREDR=0.913919;PAO=0;PQA=0;PQR=0;PRO=0;QA=4258;QR=21821;RO=546;RPL=0;RPP=233.186;RPPR=1188.63;RPR=106;RUN=1;SAF=106;SAP=233.186;SAR=0;SRF=546;SRP=1188.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:66:64,2:64:2528:2:82:0,-12.0883,-219.879 0/0:133:125,8:125:5018:8:327:0,-10.2369,-421.69 0/0:86:81,5:81:3247:5:199:0,-7.60052,-273.997 0/0:127:121,6:121:4800:6:243:0,-15.9826,-409.666 0/1:108:84,24:84:3369:24:950:-53.2846,0,-270.747 0/1:134:71,61:71:2859:61:2457:-181.281,0,-217.422 dDocent_Contig_2310 98 . N A 2936.39 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=116;CIGAR=3X;DP=116;DPB=127.667;DPRA=0;EPP=254.901;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=37.5776;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=32;PQA=1071;PQR=0;PRO=0;QA=4286;QR=0;RO=0;RPL=116;RPP=254.901;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=254.901;SAR=116;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:29:0,29:0:0:29:1052:-81.2309,-8.72987,0 1|1:43:0,43:0:0:43:1605:-89.6499,-12.9443,0 1|1:9:0,9:0:0:9:337:-21.8621,-2.70927,0 1|1:18:0,18:0:0:18:667:-46.8645,-5.41854,0 1|1:11:0,11:0:0:11:401:-34.8123,-3.31133,0 1|1:6:0,6:0:0:6:224:-18.441,-1.80618,0 dDocent_Contig_2311 35 . T C 372.401 . AB=0.4;ABP=3.87889;AC=5;AF=0.5;AN=10;AO=13;CIGAR=1X2M1X1M2X2M1X;DP=24;DPB=24;DPRA=9.5;EPP=31.2394;EPPR=0;GTI=0;LEN=1;MEANALT=1.5;MQM=17;MQMR=0;NS=5;NUMALT=4;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=424;QR=0;RO=0;RPL=0;RPP=31.2394;RPPR=0;RPR=13;RUN=1;SAF=0;SAP=31.2394;SAR=13;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:3:0,0,1,0,2:0:0:0,1,0,2:0,33,0,69:-8.33041,-8.33041,-8.33041,-5.9472,-5.9472,-5.64617,-8.33041,-8.33041,-5.9472,-8.33041,-2.69805,-2.69805,0,-2.69805,-2.09599 .:.:.:.:.:.:.:. 1|1:1:0,0,0,0,0:0:0:0,0,0,0:0,0,0,0:0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 0|0:1:0,0,0,1,0:0:0:0,0,1,0:0,0,17,0:-1.40332,-1.40332,-1.40332,-1.40332,-1.40332,-1.40332,-0.30103,-0.30103,-0.30103,0,-1.40332,-1.40332,-1.40332,-0.30103,-1.40332 1|0:10:0,4,0,0,6:0:0:4,0,0,6:125,0,0,161:-16.6595,-11.8502,-10.6461,-16.6595,-11.8502,-16.6595,-16.6595,-11.8502,-16.6595,-16.6595,-5.00933,0,-5.00933,-5.00933,-3.20315 1|1:9:0,9,0,0,0:0:0:9,0,0,0:299,0,0,0:-13.8404,-2.70927,0,-13.8404,-2.70927,-13.8404,-13.8404,-2.70927,-13.8404,-13.8404,-13.8404,-2.70927,-13.8404,-13.8404,-13.8404 dDocent_Contig_2314 98 . N A 290.423 . AB=0;ABP=0;AC=10;AF=0.833333;AN=12;AO=14;CIGAR=1X;DP=17;DPB=17;DPRA=3.2;EPP=33.4109;EPPR=0;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=2.1684e-19;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=303;QR=0;RO=0;RPL=14;RPP=33.4109;RPPR=0;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:5:0,4:0:0:4:89:-8.1469,-1.20412,0 1/1:3:0,3:0:0:3:71:-6.62505,-0.90309,0 1/1:3:0,3:0:0:3:67:-6.25185,-0.90309,0 1/1:3:0,3:0:0:3:45:-4.19979,-0.90309,0 0/0:1:0,0:0:0:0:0:0,0,0 1/1:2:0,1:0:0:1:31:-2.91448,-0.30103,0 dDocent_Contig_2315 116 . C T 17520.1 . AB=0.511494;ABP=3.40965;AC=3;AF=0.25;AN=12;AO=639;CIGAR=1X;DP=1070;DPB=1070;DPRA=7.42731;EPP=1390.58;EPPR=938.915;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=21786;QR=14792;RO=431;RPL=0;RPP=1390.58;RPPR=938.915;RPR=639;RUN=1;SAF=0;SAP=1390.58;SAR=639;SRF=0;SRP=938.915;SRR=431;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:63:63,0:63:2167:0:0:0,-18.9649,-195.302 0/0:85:85,0:85:2947:0:0:0,-25.5875,-265.477 0/0:31:31,0:31:1053:0:0:0,-9.33193,-95.074 0/0:48:48,0:48:1664:0:0:0,-14.4494,-150.05 1/1:495:34,461:34:1138:461:15685:-1308.76,-46.2923,0 0/1:348:170,178:170:5823:178:6101:-444.475,0,-419.462 dDocent_Contig_2316 60 . A C 1041.9 . AB=0.109318;ABP=1810.01;AC=2;AF=0.166667;AN=12;AO=350;CIGAR=1X;DP=5329;DPB=5329;DPRA=0;EPP=763.026;EPPR=10806.1;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999799;PAO=0;PQA=0;PQR=0;PRO=0;QA=13625;QR=196536;RO=4975;RPL=350;RPP=763.026;RPPR=10806.1;RPR=0;RUN=1;SAF=350;SAP=763.026;SAR=0;SRF=4975;SRP=10806.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:692:632,59:632:24821:59:2285:0,-2.5963,-2026.02 0/1:944:843,100:843:33284:100:3841:-61.448,0,-2708.37 0/1:419:370,49:370:14704:49:1910:-45.9635,0,-1196.1 0/0:824:762,62:762:30163:62:2452:0,-27.2171,-2491.19 0/0:1229:1211,17:1211:47750:17:626:0,-313.416,-4236.47 0/0:1221:1157,63:1157:45814:63:2511:0,-141.45,-3892.88 dDocent_Contig_2317 69 . T G 409.797 . AB=0.174497;ABP=140.134;AC=3;AF=0.25;AN=12;AO=35;CIGAR=1X;DP=315;DPB=315;DPRA=1.76875;EPP=79.0118;EPPR=611.023;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1347;QR=11081;RO=280;RPL=35;RPP=79.0118;RPPR=611.023;RPR=0;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=280;SRP=611.023;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:53:43,10:43:1728:10:396:-20.0414,0,-139.785 0/0:69:65,4:65:2544:4:158:0,-6.17171,-214.497 0/1:55:45,10:45:1767:10:379:-17.8974,0,-142.689 0/0:65:60,5:60:2374:5:189:0,-2.19277,-196.446 0/0:32:32,0:32:1278:0:0:0,-9.63296,-115.283 0/1:41:35,6:35:1390:6:225:-8.26274,0,-113.009 dDocent_Contig_2318 174 . C T 689.777 . AB=0.157143;ABP=74.4828;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X2M1X3M1X;DP=154;DPB=154;DPRA=0;EPP=26.8965;EPPR=250.558;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.454545;PAIREDR=0.77193;PAO=0;PQA=0;PQR=0;PRO=0;QA=391;QR=4252;RO=114;RPL=11;RPP=26.8965;RPPR=250.558;RPR=0;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=250.558;SRR=114;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:15:12,0,2:12:450:0,2:0,74:-2.42842,-6.04078,-42.9005,0,-36.8473,-36.2453 0|0:26:14,0,12:14:528:0,12:0,444:-32.4796,-36.694,-79.9709,0,-43.6499,-40.0376 0|0:16:13,0,3:13:488:0,3:0,111:-5.53744,-9.45083,-49.4328,0,-40.3527,-39.4496 0|0:27:17,0,10:17:630:0,10:0,364:-24.9786,-30.0961,-81.6485,0,-51.9186,-48.9083 0|1:18:14,4,0:14:526:4,0:148,0:-8.26343,0,-42.265,-12.4778,-43.4691,-55.5759 0|1:52:44,7,0:44:1630:7,0:243,0:-6.48587,0,-131.256,-19.7312,-133.363,-153.111 dDocent_Contig_2319 19 . G A 176733 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=5129;CIGAR=1X;DP=5421;DPB=5421;DPRA=0;EPP=11140.5;EPPR=450.334;GTI=0;LEN=1;MEANALT=2.16667;MQM=59.9998;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=204613;QR=8024;RO=206;RPL=0;RPP=11140.5;RPPR=450.334;RPR=5129;RUN=1;SAF=5129;SAP=11140.5;SAR=0;SRF=206;SRP=450.334;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:752:59,691:59:2275:691:27565:-2273.45,-21.2539,0 1/1:1003:71,911:71:2764:911:36273:-3012.37,-47.1206,0 1/1:635:24,611:24:967:611:24451:-2111.1,-103.825,0 1/1:964:33,917:33:1262:917:36626:-3179.06,-172.52,0 1/1:1047:18,981:18:716:981:39033:-3444.58,-236.361,0 1/1:1020:1,1018:1:40:1018:40665:-3652.01,-303.158,0 dDocent_Contig_2320 70 . T C 800.896 . AB=0.23913;ABP=111.773;AC=2;AF=0.166667;AN=12;AO=50;CIGAR=1X3M;DP=416;DPB=416;DPRA=1.83708;EPP=111.584;EPPR=780.397;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=0.68;PAIREDR=0.617318;PAO=0;PQA=0;PQR=0;PRO=0;QA=1742;QR=12044;RO=358;RPL=29;RPP=5.78978;RPPR=5.94603;RPR=21;RUN=1;SAF=29;SAP=5.78978;SAR=21;SRF=190;SRP=5.94603;SRR=168;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:66:62,1,3:62:2049:1,3:34,103:0,-15.9067,-181.284,-10.2977,-173.221,-175.076 0|0:77:68,6,3:68:2265:6,3:204,105:0,-3.9289,-185.425,-11.9235,-178.687,-194.332 0|0:31:31,0,0:31:1056:0,0:0,0:0,-9.33193,-95.3481,-9.33193,-95.3481,-95.3481 0|1:122:85,0,37:85:2875:0,37:0,1297:-80.3072,-105.895,-338.963,0,-233.415,-222.277 0|1:62:55,0,7:55:1861:0,7:0,237:-2.99711,-19.5538,-170.429,0,-151.213,-149.106 0|0:58:57,0,0:57:1938:0,0:0,0:0,-17.1587,-174.617,-17.1587,-174.617,-174.617 dDocent_Contig_2321 10 . A T 216.826 . AB=0.144144;ABP=125.102;AC=2;AF=0.166667;AN=12;AO=18;CIGAR=1X;DP=268;DPB=268;DPRA=1.21488;EPP=42.0968;EPPR=543.707;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.995984;PAO=0;PQA=0;PQR=0;PRO=0;QA=721;QR=9986;RO=249;RPL=0;RPP=42.0968;RPPR=543.707;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=249;SRP=543.707;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:34,0:34:1339:0:0:0,-10.235,-120.767 0/0:36:34,2:34:1379:2:80:0,-3.24529,-116.771 0/1:83:71,12:71:2866:12:478:-18.3828,0,-233.046 0/1:28:23,4:23:934:4:163:-6.52165,0,-75.825 0/0:30:30,0:30:1186:0:0:0,-9.0309,-107.011 0/0:57:57,0:57:2282:0:0:0,-17.1587,-205.539 dDocent_Contig_2322 35 . T A 133.474 . AB=0.25;ABP=16.0391;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=492;DPB=492;DPRA=0.631016;EPP=22.5536;EPPR=1051.83;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=360;QR=19262;RO=483;RPL=0;RPP=22.5536;RPPR=1051.83;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=483;SRP=1051.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:18,6:18:730:6:238:-14.5692,0,-58.8003 0/0:80:80,0:80:3184:0:0:0,-24.0824,-286.63 0/0:153:153,0:153:6127:0:0:0,-46.0576,-551.189 0/0:37:37,0:37:1459:0:0:0,-11.1381,-131.547 0/0:94:91,3:91:3614:3:122:0,-16.9243,-313.914 0/0:104:104,0:104:4148:0:0:0,-31.3071,-373.289 dDocent_Contig_2323 38 . G A 10389.6 . AB=0.388128;ABP=74.4309;AC=6;AF=0.5;AN=12;AO=380;CIGAR=1X;DP=949;DPB=949;DPRA=0;EPP=828.17;EPPR=1238.58;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=14615;QR=22391;RO=569;RPL=0;RPP=828.17;RPPR=1238.58;RPR=380;RUN=1;SAF=380;SAP=828.17;SAR=0;SRF=569;SRP=1238.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:83:53,30:53:2085:30:1161:-79.7938,0,-162.849 0/1:233:141,92:141:5546:92:3560:-250.325,0,-428.831 0/1:205:172,33:172:6727:33:1217:-48.0915,0,-543.441 0/0:170:158,12:158:6279:12:451:0,-10.2498,-523.93 0/1:136:36,100:36:1408:100:3848:-305.44,0,-86.0295 1/1:122:9,113:9:346:113:4378:-362.527,-5.22946,0 dDocent_Contig_2324 36 . T C 14906.5 . AB=0.791789;ABP=255.188;AC=9;AF=0.75;AN=12;AO=502;CIGAR=1X;DP=587;DPB=587;DPRA=0;EPP=1093.09;EPPR=183.243;GTI=0;LEN=1;MEANALT=1.16667;MQM=39.7789;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=19815;QR=3183;RO=83;RPL=0;RPP=1093.09;RPPR=183.243;RPR=502;RUN=1;SAF=502;SAP=1093.09;SAR=0;SRF=83;SRP=183.243;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:84:7,77:7:273:77:3059:-230.417,-0.35023,0 0/1:95:13,82:13:498:82:3230:-241.357,0,-16.5649 0/1:156:29,127:29:1120:127:5044:-373.429,0,-54.1203 0/1:90:27,61:27:1043:61:2374:-172.094,0,-67.3222 1/1:66:4,62:4:144:62:2431:-188.83,-6.55707,0 1/1:96:3,93:3:105:93:3677:-289.748,-19.1081,0 dDocent_Contig_2325 38 . T C 21220.9 . AB=0.66289;ABP=247.07;AC=6;AF=0.5;AN=12;AO=702;CIGAR=1X;DP=1059;DPB=1059;DPRA=0;EPP=1527.38;EPPR=773.883;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.725071;PAIREDR=0.949296;PAO=0;PQA=0;PQR=0;PRO=0;QA=27243;QR=13682;RO=355;RPL=0;RPP=1527.38;RPPR=773.883;RPR=702;RUN=1;SAF=702;SAP=1527.38;SAR=0;SRF=355;SRP=773.883;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:153:46,107:46:1789:107:4163:-328.647,0,-115.191 0/1:246:57,189:57:2154:189:7311:-583.707,0,-120.015 0/1:183:57,126:57:2203:126:4932:-388.747,0,-143.378 0/1:160:40,120:40:1531:120:4611:-366.829,0,-89.8914 0/1:150:82,66:82:3166:66:2570:-186.532,0,-240.123 0/1:167:73,94:73:2839:94:3656:-278.85,0,-205.381 dDocent_Contig_2327 7 . T C 126.077 . AB=0.135802;ABP=96.33;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=441;DPB=441;DPRA=1.125;EPP=26.8965;EPPR=936.743;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.876744;PAO=0;PQA=0;PQR=0;PRO=0;QA=424;QR=16375;RO=430;RPL=0;RPP=26.8965;RPPR=936.743;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=430;SRP=936.743;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:91:91,0:91:3481:0:0:0,-27.3937,-313.42 0/0:55:55,0:55:2087:0:0:0,-16.5566,-188.06 0/0:37:37,0:37:1423:0:0:0,-11.1381,-128.351 0/0:76:76,0:76:2873:0:0:0,-22.8783,-258.746 0/0:101:101,0:101:3827:0:0:0,-30.404,-344.548 0/1:81:70,11:70:2684:11:424:-14.1306,0,-217.363 dDocent_Contig_2328 15 . G C 646.647 . AB=0.138028;ABP=407.02;AC=2;AF=0.166667;AN=12;AO=96;CIGAR=1X;DP=1306;DPB=1306;DPRA=1.61327;EPP=211.472;EPPR=2630.49;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9909;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999174;PAO=0;PQA=0;PQR=0;PRO=0;QA=3782;QR=47690;RO=1210;RPL=0;RPP=211.472;RPPR=2630.49;RPR=96;RUN=1;SAF=96;SAP=211.472;SAR=0;SRF=1210;SRP=2630.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:157:157,0:157:6234:0:0:0,-47.2617,-560.778 0/0:152:152,0:152:6031:0:0:0,-45.7566,-542.581 0/0:150:141,9:141:5577:9:350:0,-13.2953,-469.924 0/1:162:147,15:147:5757:15:589:-4.57981,0,-469.2 0/0:492:454,38:454:17839:38:1497:0,-13.1307,-1469.23 0/1:193:159,34:159:6252:34:1346:-63.3066,0,-504.368 dDocent_Contig_2329 172 . G T 4179.5 . AB=0.18702;ABP=999.345;AC=6;AF=0.5;AN=12;AO=219;CIGAR=1X;DP=1171;DPB=1171;DPRA=0;EPP=478.563;EPPR=2068.08;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.990868;PAIREDR=0.987382;PAO=0;PQA=0;PQR=0;PRO=0;QA=8670;QR=37581;RO=951;RPL=219;RPP=478.563;RPPR=2068.08;RPR=0;RUN=1;SAF=0;SAP=478.563;SAR=219;SRF=0;SRP=2068.08;SRR=951;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:176:160,16:160:6304:16:638:-4.77257,0,-514.135 0/1:206:161,45:161:6357:45:1776:-98.0436,0,-509.873 0/1:116:85,31:85:3327:31:1212:-74.4266,0,-264.56 0/1:223:191,32:191:7575:32:1254:-45.9959,0,-614.246 0/1:224:158,66:158:6219:66:2638:-170.116,0,-492.032 0/1:226:196,29:196:7799:29:1152:-35.8168,0,-633.367 dDocent_Contig_2330 20 . A G 13344.6 . AB=0.033938;ABP=3227.37;AC=0;AF=0;AN=12;AO=58;CIGAR=1M1X5M1X6M;DP=2083;DPB=2122.5;DPRA=0.913904;EPP=128.956;EPPR=3056.1;GTI=0;LEN=1;MEANALT=5.2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2262;QR=55175;RO=1406;RPL=0;RPP=128.956;RPPR=3056.1;RPR=58;RUN=1;SAF=58;SAP=128.956;SAR=0;SRF=1406;SRP=3056.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:261:183,8,51,15:183:7146:8,51,15:315,2002,598:-109.543,-138.719,-723.743,0,-561.521,-572.08,-115.388,-676.909,-538.191,-698.305 0|0:374:342,0,22,8:342:13445:0,22,8:0,851,311:0,-102.952,-1208.85,-33.064,-1138.96,-1132.34,-77.4003,-1183.3,-1113.41,-1180.89 0|0:260:178,6,64,6:178:6989:6,64,6:234,2494,243:-151.394,-185.744,-758.742,0,-555.577,-555.544,-184.939,-740.511,-554.773,-757.938 0|0:346:274,21,49,0:274:10748:21,49,0:811,1926,0:-75.9351,-91.8204,-969.381,0,-817.289,-869.137,-158.417,-975.703,-883.888,-1042.3 0|0:467:246,11,193,13:246:9644:11,193,13:441,7405,514:-533.647,-571.366,-1361.11,0,-756.728,-734.963,-565.404,-1322.13,-750.766,-1354.55 0|0:375:183,12,165,14:183:7203:12,165,14:461,6428,549:-473.158,-490.411,-1079.33,0,-554.703,-542.869,-483.106,-1037.81,-547.398,-1071.43 dDocent_Contig_2331 35 . A G 16709.8 . AB=0.750343;ABP=399.848;AC=6;AF=0.5;AN=12;AO=547;CIGAR=1X;DP=729;DPB=729;DPRA=0;EPP=1190.81;EPPR=398.218;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998172;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=21124;QR=7186;RO=182;RPL=0;RPP=1190.81;RPPR=398.218;RPR=547;RUN=1;SAF=547;SAP=1190.81;SAR=0;SRF=182;SRP=398.218;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:102:37,65:37:1446:65:2477:-192.402,0,-99.6838 0/1:168:19,149:19:766:149:5785:-469.958,0,-18.6866 0/1:74:11,63:11:439:63:2439:-197.407,0,-17.5888 0/1:81:17,64:17:675:64:2513:-201.948,0,-36.6979 0/1:130:50,80:50:1963:80:3099:-239.893,0,-137.74 0/1:174:48,126:48:1897:126:4811:-380.597,0,-118.559 dDocent_Contig_2334 17 . G A 34802.8 . AB=0.221016;ABP=1746.52;AC=2;AF=0.166667;AN=12;AO=570;CIGAR=1X2M1X2M1X;DP=2579;DPB=2579;DPRA=0;EPP=1240.75;EPPR=1290.69;GTI=0;LEN=1;MEANALT=4.5;MQM=59.8018;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.983137;PAO=0;PQA=0;PQR=0;PRO=0;QA=22371;QR=22945;RO=593;RPL=0;RPP=1240.75;RPPR=1290.69;RPR=570;RUN=1;SAF=570;SAP=1240.75;SAR=0;SRF=593;SRP=1290.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:297:70,45,57,125:70:2707:45,57,125:1742,2206,5022:-392.755,-270.741,-479.528,-232.641,-311.888,-437.815,0,-79.2478,-41.1472,-184.707 0|0:380:122,40,90,127:122:4780:40,90,127:1586,3552,5100:-383.496,-289.682,-670.696,-127.964,-390.478,-493.926,0,-262.515,-100.796,-354.825 0|0:319:166,32,32,88:166:6394:32,32,88:1262,1250,3551:-242.752,-188.895,-704.218,-189.968,-611.093,-705.29,0,-421.129,-422.202,-498.469 1|0:445:119,128,122,74:119:4607:128,122,74:5050,4727,2934:-389.398,-9.87993,-349.769,-36.9206,0,-378.615,-183.739,-146.819,-173.859,-539.884 1|0:516:58,186,155,113:58:2218:186,155,113:7298,6102,4518:-902.677,-319.978,-445.968,-418.177,0,-553.5,-548.012,-129.834,-228.033,-695.978 0|0:622:58,139,194,229:58:2239:139,194,229:5433,7551,9235:-1180.42,-751.904,-893.923,-577.355,-315.242,-702.818,-436.665,-174.55,0,-551.593 dDocent_Contig_2335 9 . C T 801.127 . AB=0.146283;ABP=456.181;AC=4;AF=0.333333;AN=12;AO=69;CIGAR=1X;DP=651;DPB=651;DPRA=0;EPP=152.842;EPPR=1266.81;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.811594;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2664;QR=22296;RO=582;RPL=0;RPP=152.842;RPPR=1266.81;RPR=69;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=582;SRP=1266.81;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:106:105,1:105:4025:1:39:0,-28.0126,-358.438 0/1:123:105,18:105:4050:18:694:-25.766,0,-327.556 0/1:71:63,8:63:2412:8:312:-7.07179,0,-195.909 0/1:149:123,26:123:4729:26:1003:-45.7268,0,-380.794 0/1:74:65,9:65:2502:9:341:-8.76997,0,-203.104 0/0:128:121,7:121:4578:7:275:0,-13.4126,-386.949 dDocent_Contig_2336 27 . A G 232.384 . AB=0.095791;ABP=980.8;AC=1;AF=0.0833333;AN=12;AO=193;CIGAR=1X;DP=3383;DPB=3383;DPRA=0;EPP=422.104;EPPR=6927.84;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7499;QR=126524;RO=3189;RPL=0;RPP=422.104;RPPR=6927.84;RPR=193;RUN=1;SAF=193;SAP=422.104;SAR=0;SRF=3189;SRP=6927.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:528:501,27:501:19899:27:1058:0,-63.4326,-1693.82 0/1:689:623,66:623:24666:66:2578:-24.7613,0,-2010.51 0/0:472:435,37:435:17231:37:1458:0,-10.6072,-1417.99 0/0:650:632,17:632:25139:17:660:0,-136.038,-2200.68 0/0:517:493,24:493:19538:24:890:0,-75.2347,-1676.48 0/0:527:505,22:505:20051:22:855:0,-81.3805,-1725.72 dDocent_Contig_2337 7 . T G 83669 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=2930;CIGAR=1X;DP=3038;DPB=3038;DPRA=0;EPP=6365.42;EPPR=198.443;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999659;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=94323;QR=1327;RO=90;RPL=0;RPP=6365.42;RPPR=198.443;RPR=2930;RUN=1;SAF=2930;SAP=6365.42;SAR=0;SRF=90;SRP=198.443;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:315:12,301:12:201:301:9902:-872.752,-76.1102,0 1/1:554:16,536:16:213:536:17298:-1537.01,-147.095,0 1/1:489:8,478:8:135:478:15174:-1352.9,-134.244,0 1/1:389:12,374:12:190:374:12076:-1069.33,-99.134,0 1/1:591:18,572:18:257:572:18576:-1647.98,-154.447,0 1/1:700:24,669:24:331:669:21297:-1886.15,-178.838,0 dDocent_Contig_2338 15 . C G 1484.67 . AB=0.183628;ABP=395.97;AC=4;AF=0.333333;AN=12;AO=104;CIGAR=1X;DP=846;DPB=846;DPRA=0;EPP=228.843;EPPR=1614.24;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.00961538;PAIREDR=0.993261;PAO=0;PQA=0;PQR=0;PRO=0;QA=4065;QR=29837;RO=742;RPL=0;RPP=228.843;RPPR=1614.24;RPR=104;RUN=1;SAF=104;SAP=228.843;SAR=0;SRF=742;SRP=1614.24;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:141:110,31:110:4440:31:1235:-68.9789,0,-357.077 0/1:119:103,16:103:4153:16:626:-20.85,0,-337.902 0/1:94:82,12:82:3267:12:459:-13.3471,0,-265.785 0/1:98:74,24:74:2959:24:908:-52.5126,0,-236.89 0/0:251:238,13:238:9614:13:510:0,-29.3146,-818.37 0/0:143:135,8:135:5404:8:327:0,-13.2472,-456.386 dDocent_Contig_2339 56 . T G 25485.7 . AB=0.838081;ABP=665.199;AC=8;AF=0.666667;AN=12;AO=786;CIGAR=1X;DP=895;DPB=895;DPRA=0;EPP=1709.79;EPPR=239.701;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=30681;QR=4224;RO=109;RPL=786;RPP=1709.79;RPPR=239.701;RPR=0;RUN=1;SAF=786;SAP=1709.79;SAR=0;SRF=109;SRP=239.701;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:131:30,101:30:1180:101:4010:-321.462,0,-67.051 0/1:152:40,112:40:1566:112:4351:-345.786,0,-95.4321 0/1:222:22,200:22:828:200:7805:-635.271,0,-7.99605 0/1:162:16,146:16:609:146:5703:-464.351,0,-6.36621 1/1:107:0,107:0:0:107:4154:-373.864,-32.2102,0 1/1:121:1,120:1:41:120:4658:-415.063,-32.3301,0 dDocent_Contig_2340 15 . C T 50241.3 . AB=0.648734;ABP=245.885;AC=8;AF=0.666667;AN=12;AO=1527;CIGAR=1X;DP=1992;DPB=1992;DPRA=0;EPP=3318.85;EPPR=1012.74;GTI=0;LEN=1;MEANALT=1;MQM=59.9935;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0.984283;PAIREDR=0.894624;PAO=0;PQA=0;PQR=0;PRO=0;QA=61005;QR=18390;RO=465;RPL=0;RPP=3318.85;RPPR=1012.74;RPR=1527;RUN=1;SAF=1527;SAP=3318.85;SAR=0;SRF=465;SRP=1012.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:256:77,179:77:3049:179:7167:-567.617,0,-197.448 0/1:370:148,222:148:5877:222:8814:-681.368,0,-417.357 0/1:328:122,206:122:4885:206:8255:-643.741,0,-340.804 0/1:310:97,213:97:3754:213:8512:-672.268,0,-244.581 1/1:414:0,414:0:0:414:16516:-1485.08,-124.626,0 1/1:314:21,293:21:825:293:11741:-981.278,-19.9672,0 dDocent_Contig_2341 113 . A T 62.3266 . AB=0.16;ABP=53.2147;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=159;DPB=159;DPRA=1.12;EPP=24.725;EPPR=326.56;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=335;QR=5126;RO=149;RPL=0;RPP=24.725;RPPR=326.56;RPR=10;RUN=1;SAF=0;SAP=24.725;SAR=10;SRF=0;SRP=326.56;SRR=149;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:27:23,4:23:802:4:126:-3.52334,0,-64.3728 0/1:23:19,4:19:647:4:139:-5.929,0,-51.626 0/0:15:15,0:15:527:0:0:0,-4.51545,-47.7618 0/0:34:34,0:34:1179:0:0:0,-10.235,-106.417 0/0:34:32,2:32:1071:2:70:0,-3.58762,-90.0429 0/0:26:26,0:26:900:0:0:0,-7.82678,-81.3151 dDocent_Contig_2342 14 . G A 133599 . AB=0.758668;ABP=2550.84;AC=12;AF=1;AN=12;AO=3326;CIGAR=1X2M;DP=4384;DPB=4384;DPRA=0;EPP=7225.33;EPPR=270.101;GTI=0;LEN=1;MEANALT=2.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.999699;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=130806;QR=4697;RO=123;RPL=0;RPP=7225.33;RPPR=270.101;RPR=3326;RUN=1;SAF=3326;SAP=7225.33;SAR=0;SRF=123;SRP=270.101;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:653:28,123,500:28:1075:123,500:4854,19677:-1921.24,-1530.31,-1581.51,-311.141,0,-248.861 1|1:816:22,100,694:22:827:100,694:3970,27272:-2495.39,-2175.21,-2212.85,-259.075,0,-117.904 1|1:562:19,84,458:19:719:84,458:3336,18137:-1702.65,-1433.75,-1467.39,-215.706,0,-136.765 1|1:742:54,129,559:54:2076:129,559:5115,21932:-2037.83,-1633.07,-1764.66,-250.609,0,-252.754 1|1:843:0,300,542:0:0:300,542:11895,21232:-2724.79,-1745.7,-1655.4,-979.106,0,-815.947 1|1:768:0,194,573:0:0:194,573:7697,22556:-2489.24,-1855.67,-1797.27,-633.855,0,-461.365 dDocent_Contig_2343 88 . A T 1802.87 . AB=0.212687;ABP=387.329;AC=5;AF=0.416667;AN=12;AO=120;CIGAR=1X;DP=712;DPB=712;DPRA=0;EPP=263.587;EPPR=1288.52;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4066;QR=19944;RO=592;RPL=120;RPP=263.587;RPPR=1288.52;RPR=0;RUN=1;SAF=120;SAP=263.587;SAR=0;SRF=592;SRP=1288.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:114:76,38:76:2545:38:1319:-84.6948,0,-194.991 0/0:176:170,6:170:5740:6:185:0,-36.029,-499.815 0/1:105:82,23:82:2758:23:793:-40.0803,0,-216.864 0/1:109:89,20:89:3011:20:687:-29.3383,0,-238.423 0/1:131:109,22:109:3640:22:707:-24.4963,0,-288.386 0/1:77:66,11:66:2250:11:375:-10.899,0,-179.592 dDocent_Contig_2344 11 . G T 12714 . AB=0.200529;ABP=2357.07;AC=5;AF=0.416667;AN=12;AO=630;CIGAR=1X;DP=4024;DPB=4024;DPRA=0;EPP=1371.04;EPPR=7372.99;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=25316;QR=135619;RO=3394;RPL=0;RPP=1371.04;RPPR=7372.99;RPR=630;RUN=1;SAF=630;SAP=1371.04;SAR=0;SRF=3394;SRP=7372.99;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:512:386,126:386:15329:126:5042:-299.515,0,-1224.29 0/1:674:516,158:516:20691:158:6337:-367.155,0,-1657.48 0/1:487:308,179:308:12318:179:7222:-502.989,0,-961.104 0/1:463:413,50:413:16531:50:1995:-40.3608,0,-1347.06 0/0:1002:978,24:978:39081:24:972:0,-213.855,-3425.8 0/1:886:793,93:793:31669:93:3748:-70.5994,0,-2580.54 dDocent_Contig_2345 107 . N G 95.8048 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=96;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:64:-6.07837,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_2346 50 . G C 330.771 . AB=0.119048;ABP=373.608;AC=3;AF=0.25;AN=12;AO=57;CIGAR=1M2D2X;DP=827;DPB=804.2;DPRA=0.790419;EPP=126.784;EPPR=1666.36;GTI=0;LEN=1;MEANALT=1.8;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2266;QR=30139;RO=766;RPL=0;RPP=126.784;RPPR=1666.36;RPR=57;RUN=1;SAF=57;SAP=126.784;SAR=0;SRF=766;SRP=1666.36;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:93:77,15:77:3035:15:601:-26.6251,0,-245.479 0|0:167:167,0:167:6523:0:0:0,-50.272,-586.864 0|0:227:208,19:208:8243:19:751:0,-0.422573,-673.576 0|1:68:61,6:61:2420:6:245:-1.87672,0,-197.421 0|0:139:134,3:134:5233:3:121:0,-30.3648,-459.608 0|1:133:119,14:119:4685:14:548:-9.62231,0,-381.574 dDocent_Contig_2347 48 . A G 2761.44 . AB=0.230519;ABP=391.563;AC=4;AF=0.333333;AN=12;AO=181;CIGAR=1X;DP=1114;DPB=1114;DPRA=0;EPP=17.7067;EPPR=1983.63;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.8895;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6562;QR=35466;RO=932;RPL=108;RPP=17.7067;RPPR=1983.63;RPR=73;RUN=1;SAF=181;SAP=396.047;SAR=0;SRF=932;SRP=2026.82;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:133:108,24:108:4045:24:865:-38.0792,0,-324.076 0/1:169:141,28:141:5223:28:979:-37.5375,0,-419.231 0/1:165:123,42:123:4755:42:1559:-90.9118,0,-378.236 0/1:149:101,48:101:3813:48:1794:-116.838,0,-298.392 0/0:259:236,23:236:9108:23:811:0,-4.66557,-746.004 0/0:239:223,16:223:8522:16:554:0,-21.7634,-716.443 dDocent_Contig_2348 8 . A G 282.224 . AB=0.0992806;ABP=972.359;AC=1;AF=0.0833333;AN=12;AO=119;CIGAR=1X;DP=3419;DPB=3419;DPRA=1.11248;EPP=261.416;EPPR=7166.7;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998788;PAO=0;PQA=0;PQR=0;PRO=0;QA=4556;QR=126044;RO=3299;RPL=0;RPP=261.416;RPPR=7166.7;RPR=119;RUN=1;SAF=119;SAP=261.416;SAR=0;SRF=3299;SRP=7166.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:378:376,2:376:14326:2:71:0,-107.048,-1281.97 0/0:735:706,29:706:27028:29:1107:0,-121.325,-2331.02 0/0:379:376,3:376:14396:3:111:0,-103.738,-1284.63 0/0:521:521,0:521:19939:0:0:0,-156.837,-1793.44 0/0:711:694,16:694:26420:16:614:0,-158.512,-2320.7 0/1:695:626,69:626:23935:69:2653:-29.7452,0,-1943.59 dDocent_Contig_2349 45 . G A 658.308 . AB=0.15;ABP=322.217;AC=2;AF=0.166667;AN=12;AO=59;CIGAR=1X;DP=822;DPB=822;DPRA=0.918367;EPP=131.127;EPPR=1623.11;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.976378;PAO=0;PQA=0;PQR=0;PRO=0;QA=2312;QR=30132;RO=762;RPL=0;RPP=131.127;RPPR=1623.11;RPR=59;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=762;SRP=1657.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:147:147,0:147:5740:0:0:0,-44.2514,-516.425 0/1:150:126,24:126:5020:24:920:-37.9379,0,-406.526 0/0:111:104,7:104:4057:7:263:0,-9.3913,-341.088 0/0:138:132,6:132:5232:6:244:0,-19.2033,-448.405 0/0:126:125,1:125:4951:1:41:0,-33.8352,-441.386 0/1:150:128,21:128:5132:21:844:-31.1148,0,-416.595 dDocent_Contig_2350 12 . G A 23776.3 . AB=0.384716;ABP=267.365;AC=6;AF=0.5;AN=12;AO=881;CIGAR=1X;DP=2290;DPB=2290;DPRA=0;EPP=1916.08;EPPR=3053.93;GTI=0;LEN=1;MEANALT=1.33333;MQM=55.7457;MQMR=59.9829;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=34524;QR=55815;RO=1405;RPL=0;RPP=1916.08;RPPR=3053.93;RPR=881;RUN=1;SAF=881;SAP=1916.08;SAR=0;SRF=1405;SRP=3053.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:255:147,108:147:5884:108:4230:-301.396,0,-452.58 0/1:411:226,185:226:9006:185:7183:-514.077,0,-686.286 0/1:268:188,80:188:7515:80:3107:-196.28,0,-595.292 0/1:317:219,98:219:8627:98:3806:-242.582,0,-680.528 0/1:540:293,246:293:11558:246:9731:-705.966,0,-876.817 0/1:499:332,164:332:13225:164:6467:-428.548,0,-1039.59 dDocent_Contig_2351 1 . N G 183.772 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=52;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=199;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:118:-11.0025,-0.90309,0 1/1:2:0,2:0:0:2:81:-7.07285,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_2354 24 . T C 1592.55 . AB=0.161512;ABP=582.204;AC=4;AF=0.333333;AN=12;AO=112;CIGAR=1X;DP=997;DPB=997;DPRA=0;EPP=246.215;EPPR=1924.76;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4510;QR=35391;RO=885;RPL=0;RPP=246.215;RPPR=1924.76;RPR=112;RUN=1;SAF=112;SAP=246.215;SAR=0;SRF=885;SRP=1924.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:151:134,17:134:5372:17:691:-17.0629,0,-437.854 0/1:116:100,16:100:3986:16:642:-23.195,0,-323.794 0/1:203:159,44:159:6338:44:1759:-97.4162,0,-509.044 0/1:112:95,17:95:3824:17:691:-28.8024,0,-310.432 0/0:210:204,6:204:8132:6:237:0,-41.5168,-709.733 0/0:205:193,12:193:7739:12:490:0,-17.26,-651.639 dDocent_Contig_2355 8 . A G 1368.06 . AB=0.247148;ABP=149.06;AC=6;AF=0.5;AN=12;AO=65;CIGAR=3M1X;DP=263;DPB=263.75;DPRA=0;EPP=144.156;EPPR=424.276;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=0.892308;PAIREDR=0.824742;PAO=0;PQA=0;PQR=0;PRO=0;QA=2496;QR=7458;RO=194;RPL=0;RPP=144.156;RPPR=424.276;RPR=65;RUN=1;SAF=65;SAP=144.156;SAR=0;SRF=194;SRP=424.276;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:23:17,0,6:17:650:0,6:0,232:-14.3252,-19.4427,-72.7773,0,-53.7197,-51.9136 0|1:57:37,3,17:37:1428:3,17:116,657:-42.8248,-44.4346,-160.808,0,-107.748,-112.159 0|1:49:40,0,9:40:1536:0,9:0,340:-16.2026,-28.2438,-154.338,0,-126.473,-123.763 0|1:55:40,0,14:40:1533:0,14:0,536:-31.948,-43.9892,-169.809,0,-125.822,-121.608 0|1:29:23,0,6:23:884:0,6:0,234:-12.7012,-19.6249,-92.1931,0,-72.9567,-71.1505 0|1:50:37,0,13:37:1427:0,13:0,497:-30.0256,-41.1637,-158.353,0,-117.572,-113.659 dDocent_Contig_2356 98 . N G 54.3599 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=51;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,2:0:0:2:20:-1.81999,-0.60206,0 1/1:1:0,1:0:0:1:6:-0.599999,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:25:-2.49986,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_2357 47 . T A 866.688 . AB=0.170667;ABP=356.289;AC=4;AF=0.333333;AN=12;AO=64;CIGAR=1X;DP=510;DPB=510;DPRA=1.38889;EPP=5.18177;EPPR=7.6997;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.46875;PAIREDR=0.476404;PAO=0;PQA=0;PQR=0;PRO=0;QA=2266;QR=16197;RO=445;RPL=0;RPP=141.985;RPPR=969.316;RPR=64;RUN=1;SAF=36;SAP=5.18177;SAR=28;SRF=238;SRP=7.6997;SRR=207;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:56:32,24:32:1188:24:887:-63.2702,0,-90.3485 0/1:94:78,15:78:2914:15:525:-19.3881,0,-234.243 0/1:98:89,9:89:3197:9:330:-0.539854,0,-258.38 0/1:127:111,16:111:4035:16:524:-9.2298,0,-325.002 0/0:50:50,0:50:1842:0:0:0,-15.0515,-166.024 0/0:85:85,0:85:3021:0:0:0,-25.5875,-272.045 dDocent_Contig_2358 11 . C T 2215.68 . AB=0.25;ABP=215.815;AC=5;AF=0.416667;AN=12;AO=98;CIGAR=1X;DP=448;DPB=448;DPRA=1.4;EPP=215.815;EPPR=763.026;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.897959;PAIREDR=0.888571;PAO=0;PQA=0;PQR=0;PRO=0;QA=3858;QR=13959;RO=350;RPL=0;RPP=215.815;RPPR=763.026;RPR=98;RUN=1;SAF=98;SAP=215.815;SAR=0;SRF=350;SRP=763.026;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:86:58,28:58:2310:28:1108:-74.1156,0,-182.172 0/1:101:81,20:81:3243:20:767:-38.9369,0,-261.528 0/0:56:56,0:56:2235:0:0:0,-16.8577,-201.316 0/1:63:46,17:46:1801:17:683:-42.8325,0,-143.344 0/1:94:77,17:77:3086:17:680:-33.2299,0,-249.524 0/1:48:32,16:32:1284:16:620:-41.6751,0,-101.379 dDocent_Contig_2359 37 . A G 16137.2 . AB=0.825449;ABP=566.959;AC=6;AF=0.5;AN=12;AO=506;CIGAR=1X;DP=613;DPB=613;DPRA=0;EPP=1101.78;EPPR=235.358;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.944664;PAIREDR=0.906542;PAO=0;PQA=0;PQR=0;PRO=0;QA=20102;QR=4218;RO=107;RPL=0;RPP=1101.78;RPPR=235.358;RPR=506;RUN=1;SAF=506;SAP=1101.78;SAR=0;SRF=107;SRP=235.358;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:82:14,68:14:544:68:2665:-215.291,0,-24.6115 0/1:129:25,104:25:939:104:4167:-336.161,0,-45.9646 0/1:77:12,65:12:489:65:2547:-206.183,0,-21.182 0/1:75:12,63:12:487:63:2492:-201.849,0,-21.6038 0/1:112:21,91:21:843:91:3611:-291.304,0,-42.4664 0/1:138:23,115:23:916:115:4620:-374.157,0,-41.2043 dDocent_Contig_2361 91 . G A 213.987 . AB=0.141975;ABP=183.377;AC=1;AF=0.0833333;AN=12;AO=45;CIGAR=1X;DP=990;DPB=990;DPRA=1.14751;EPP=100.727;EPPR=2055.05;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.985185;PAO=0;PQA=0;PQR=0;PRO=0;QA=1545;QR=31376;RO=945;RPL=45;RPP=100.727;RPPR=2055.05;RPR=0;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=945;SRP=2055.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:159:147,12:147:4887:12:414:0,-10.2723,-402.429 0/0:278:278,0:278:9329:0:0:0,-83.6863,-839.663 0/1:162:139,23:139:4631:23:793:-22.9215,0,-368.214 0/0:208:198,10:198:6496:10:338:0,-31.8671,-554.034 0/0:85:85,0:85:2846:0:0:0,-25.5875,-256.389 0/0:98:98,0:98:3187:0:0:0,-29.5009,-287.063 dDocent_Contig_2362 7 . T C 214.742 . AB=0.05;ABP=143.722;AC=0;AF=0;AN=12;AO=4;CIGAR=1X2M3X3M1X2M1X;DP=327;DPB=327;DPRA=0.647773;EPP=11.6962;EPPR=645.766;GTI=0;LEN=1;MEANALT=2.5;MQM=40;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.983108;PAO=0;PQA=0;PQR=0;PRO=0;QA=149;QR=11422;RO=296;RPL=0;RPP=11.6962;RPPR=645.766;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=296;SRP=645.766;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:50:48,0,2:48:1838:0,2:0,82:0,-14.4494,-165.264,-7.48821,-158.7,-158.098 0|0:61:58,0,2:58:2245:0,2:0,82:0,-17.4597,-201.924,-10.7579,-195.36,-194.758 0|0:46:44,0,2:44:1674:0,2:0,78:0,-13.2453,-150.534,-6.58748,-144.258,-143.656 0|0:40:34,2,4:34:1336:2,4:71,159:-2.56888,-7.29414,-116.586,0,-104.416,-108.735 0|0:40:27,2,10:27:1047:2,10:78,381:-22.1081,-24.2762,-109.701,0,-80.0642,-83.0132 0|0:90:85,0,5:85:3282:0,5:0,202:0,-25.5875,-295.116,-8.99684,-278.918,-277.413 dDocent_Contig_2363 13 . T C 70704.4 . AB=0.0693541;ABP=3719.24;AC=1;AF=0.0833333;AN=12;AO=160;CIGAR=1X2M1X;DP=2752;DPB=2756;DPRA=1.03685;EPP=350.446;EPPR=482.906;GTI=0;LEN=1;MEANALT=2.8;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6166;QR=8794;RO=221;RPL=0;RPP=350.446;RPPR=482.906;RPR=160;RUN=1;SAF=160;SAP=350.446;SAR=0;SRF=221;SRP=482.906;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:496:22,56,0,418:22:862:56,0,418:2168,0,15328:-1353.28,-1181.82,-1235.84,-1359.91,-1252.69,-1430.78,-107.207,0,-178.084,-52.2538 0|0:482:43,32,0,406:43:1728:32,0,406:1217,0,14867:-1201.9,-1115.03,-1247.8,-1214.84,-1257.43,-1357.24,0,-42.6109,-142.408,-20.1902 0|0:481:97,42,0,341:97:3870:42,0,341:1616,0,12584:-999.862,-896.392,-1202.46,-1029.06,-1215.11,-1347.78,0,-186.054,-318.718,-216.067 0|0:445:44,26,0,375:44:1739:26,0,375:1007,0,13654:-1101.87,-1032.39,-1167.67,-1115.11,-1175.49,-1258.22,0,-60.3851,-143.103,-30.217 0|0:445:11,0,32,402:11:438:0,32,402:0,1274,14575:-1271.46,-1274.77,-1310.84,-1169.87,-1205.94,-1196.3,-84.9485,-121.014,-16.1133,0 0|0:403:4,4,92,287:4:157:4,92,287:158,3599,10629:-1151.29,-1139.49,-1151.2,-856.599,-856.51,-841.817,-282.989,-282.899,0,-209.505 dDocent_Contig_2364 98 . N G 471.025 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=16;CIGAR=2X;DP=16;DPB=19.5;DPRA=0;EPP=37.7539;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0;PAIREDR=0;PAO=7;PQA=176;PQR=0;PRO=0;QA=506;QR=0;RO=0;RPL=16;RPP=37.7539;RPPR=0;RPR=0;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:5:0,5:0:0:5:150:-13.7962,-1.50515,0 1|1:1:0,1:0:0:1:35:-3.18374,-0.30103,0 1|1:5:0,5:0:0:5:149:-13.3802,-1.50515,0 1|1:3:0,3:0:0:3:102:-9.5169,-0.90309,0 1|1:1:0,1:0:0:1:35:-3.22039,-0.30103,0 1|1:1:0,1:0:0:1:35:-3.15874,-0.30103,0 dDocent_Contig_2365 79 . A G 781.404 . AB=0.088968;ABP=415.366;AC=0;AF=0;AN=12;AO=26;CIGAR=3M1X1M;DP=1518;DPB=1505;DPRA=1.54673;EPP=59.4686;EPPR=3090.84;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.97609;PAO=0;PQA=0;PQR=0;PRO=0;QA=922;QR=50715;RO=1422;RPL=26;RPP=59.4686;RPPR=3090.84;RPR=0;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=1422;SRP=3090.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:227:227,0,0:227:7947:0,0:0,0:0,-68.3338,-715.278,-68.3338,-715.278,-715.278 0|0:206:205,0,0:205:7089:0,0:0,0:0,-61.7111,-637.914,-61.7111,-637.914,-637.914 0|0:201:200,0,0:200:7214:0,0:0,0:0,-60.206,-649.202,-60.206,-649.202,-649.202 0|0:222:221,0,0:221:7962:0,0:0,0:0,-66.5276,-716.429,-66.5276,-716.429,-716.429 0|0:381:364,15,1:364:13136:15,1:512,15:0,-67.9254,-1135.6,-108.537,-1139.07,-1180.31 0|0:281:205,50,25:205:7367:50,25:1739,907:-79.6633,0,-585.928,-67.3099,-526.92,-660.774 dDocent_Contig_2366 7 . A T 28016 . AB=0.482307;ABP=8.6195;AC=6;AF=0.5;AN=12;AO=995;CIGAR=1X;DP=2063;DPB=2063;DPRA=0;EPP=2163.63;EPPR=2311.29;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.994975;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=38154;QR=40614;RO=1063;RPL=0;RPP=2163.63;RPPR=2311.29;RPR=995;RUN=1;SAF=995;SAP=2163.63;SAR=0;SRF=1063;SRP=2311.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:344:192,152:192:7314:152:5864:-424.154,0,-554.567 0/1:359:203,155:203:7770:155:5947:-427.305,0,-591.255 0/1:164:104,60:104:3997:60:2300:-157.845,0,-310.45 0/1:395:245,148:245:9343:148:5638:-388.838,0,-722.019 0/1:395:176,218:176:6744:218:8365:-633.748,0,-487.98 0/1:406:143,262:143:5446:262:10040:-780.937,0,-367.819 dDocent_Contig_2367 8 . A T 1003.93 . AB=0.12976;ABP=847.174;AC=3;AF=0.25;AN=12;AO=107;CIGAR=1X;DP=1579;DPB=1579;DPRA=0.81803;EPP=235.358;EPPR=3138.91;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9253;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993886;PAO=0;PQA=0;PQR=0;PRO=0;QA=4119;QR=56159;RO=1472;RPL=0;RPP=235.358;RPPR=3199.42;RPR=107;RUN=1;SAF=107;SAP=235.358;SAR=0;SRF=1465;SRP=3138.91;SRR=7;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:177:157,20:157:5991:20:775:-16.7959,0,-485.801 0/1:324:288,36:288:11036:36:1376:-26.5902,0,-895.233 0/1:208:172,36:172:6516:36:1384:-62.2284,0,-523.753 0/0:271:256,15:256:9755:15:584:0,-28.6759,-824.679 0/0:303:303,0:303:11580:0:0:0,-91.2121,-1041.7 0/0:296:296,0:296:11281:0:0:0,-89.1049,-1014.87 dDocent_Contig_2368 19 . C T 553.441 . AB=0.237624;ABP=63.403;AC=1;AF=0.0833333;AN=12;AO=24;CIGAR=8M1X5M;DP=330;DPB=329.143;DPRA=2.20524;EPP=55.1256;EPPR=647.938;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.989899;PAO=0;PQA=0;PQR=0;PRO=0;QA=964;QR=11698;RO=297;RPL=0;RPP=55.1256;RPPR=647.938;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=297;SRP=647.938;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:27:27,0,0:27:1066:0,0:0,0:0,-8.12781,-96.2378,-8.12781,-96.2378,-96.2378 0|0:43:41,0,0:41:1611:0,0:0,0:0,-12.3422,-144.833,-12.3422,-144.833,-144.833 0|0:42:40,0,0:40:1566:0,0:0,0:0,-12.0412,-140.784,-12.0412,-140.784,-140.784 0|0:38:35,3,0:35:1373:3,0:103,0:0,-1.83124,-114.231,-10.536,-115.134,-123.492 0|1:101:75,0,24:75:2978:0,24:0,964:-56.867,-79.4442,-324.606,0,-245.171,-237.947 0|0:79:79,0,0:79:3104:0,0:0,0:0,-23.7814,-279.476,-23.7814,-279.476,-279.476 dDocent_Contig_2369 32 . T G 142106 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=4215;CIGAR=1X3M;DP=4533;DPB=4533;DPRA=0;EPP=9155.77;EPPR=530.678;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.999763;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=167413;QR=9344;RO=243;RPL=0;RPP=9155.77;RPPR=530.678;RPR=4215;RUN=1;SAF=4215;SAP=9155.77;SAR=0;SRF=243;SRP=530.678;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:777:30,0,746:30:1148:0,746:0,29579:-2555.86,-2564.89,-2659.09,-130.381,-224.568,0 1|1:789:56,0,729:56:2134:0,729:0,29025:-2417.39,-2434.24,-2609.28,-44.3558,-219.451,0 1|1:578:42,0,533:42:1636:0,533:0,21221:-1760.63,-1773.27,-1907.73,-25.8527,-160.449,0 1|1:751:27,0,721:27:1021:0,721:0,28664:-2485.03,-2493.16,-2576.84,-133.221,-217.043,0 1|1:859:31,1,817:31:1190:1,817:31,32370:-2802.99,-2809.83,-2907.2,-148.24,-243.455,0 1|1:779:57,51,669:57:2215:51,669:1908,26554:-2187.95,-2048.87,-2215.52,-19.3697,-45.1478,0 dDocent_Contig_2370 44 . A T 44.7836 . AB=0.1875;ABP=16.582;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=156;DPB=156;DPRA=0.571429;EPP=9.52472;EPPR=335.246;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.856209;PAO=0;PQA=0;PQR=0;PRO=0;QA=116;QR=5843;RO=153;RPL=0;RPP=9.52472;RPPR=335.246;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=153;SRP=335.246;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:1127:0:0:0,-8.72987,-101.728 0/0:29:29,0:29:1067:0:0:0,-8.72987,-96.3233 0/0:18:18,0:18:695:0:0:0,-5.41854,-62.8779 0/0:50:50,0:50:1911:0:0:0,-15.0515,-172.227 0/0:14:14,0:14:552:0:0:0,-4.21442,-50.0248 0/1:16:13,3:13:491:3:116:-6.00122,0,-39.7141 dDocent_Contig_2371 26 . G A 444.65 . AB=0.127036;ABP=373.936;AC=4;AF=0.333333;AN=12;AO=43;CIGAR=1X;DP=485;DPB=485;DPRA=0.831915;EPP=96.3836;EPPR=962.801;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.91629;PAO=0;PQA=0;PQR=0;PRO=0;QA=1701;QR=17430;RO=442;RPL=0;RPP=96.3836;RPPR=962.801;RPR=43;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=442;SRP=962.801;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:58:50,8:50:1986:8:326:-12.2501,0,-161.466 0/1:103:94,9:94:3658:9:360:-1.75712,0,-298.243 0/0:84:80,4:80:3166:4:127:0,-13.5483,-273.264 0/1:69:63,6:63:2458:6:241:-1.29523,0,-200.594 0/0:94:94,0:94:3742:0:0:0,-28.2968,-336.795 0/1:77:61,16:61:2420:16:647:-35.3844,0,-194.774 dDocent_Contig_2372 44 . G A 80.1141 . AB=0.106195;ABP=155.225;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=430;DPB=430;DPRA=1.78233;EPP=29.068;EPPR=842.529;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997608;PAO=0;PQA=0;PQR=0;PRO=0;QA=480;QR=16544;RO=418;RPL=0;RPP=29.068;RPPR=842.529;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=418;SRP=910.686;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:71:71,0:71:2797:0:0:0,-21.3731,-251.849 0/1:113:101,12:101:3978:12:480:-9.53428,0,-323.995 0/0:51:51,0:51:2041:0:0:0,-15.3525,-183.879 0/0:79:79,0:79:3137:0:0:0,-23.7814,-282.406 0/0:72:72,0:72:2838:0:0:0,-21.6742,-255.535 0/0:44:44,0:44:1753:0:0:0,-13.2453,-157.987 dDocent_Contig_2373 9 . T A 8329.86 . AB=0.676329;ABP=114.815;AC=6;AF=0.5;AN=12;AO=280;CIGAR=1X;DP=414;DPB=414;DPRA=0;EPP=611.023;EPPR=291.816;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.7;PAIREDR=0.796992;PAO=0;PQA=0;PQR=0;PRO=0;QA=10749;QR=5087;RO=133;RPL=0;RPP=611.023;RPPR=291.816;RPR=280;RUN=1;SAF=280;SAP=611.023;SAR=0;SRF=133;SRP=291.816;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:74:22,52:22:838:52:1976:-155.799,0,-53.4644 0/1:72:26,46:26:988:46:1765:-137.432,0,-67.5501 0/1:86:49,37:49:1886:37:1428:-102.911,0,-144.097 0/1:64:23,40:23:883:40:1536:-119.157,0,-60.4346 0/1:66:7,59:7:271:59:2269:-184.557,0,-4.88833 0/1:52:6,46:6:221:46:1775:-144.351,0,-4.59052 dDocent_Contig_2374 10 . G A 3495.57 . AB=0.57561;ABP=13.1897;AC=6;AF=0.5;AN=12;AO=118;CIGAR=1X;DP=205;DPB=205;DPRA=0;EPP=259.244;EPPR=191.928;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.864407;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4673;QR=3485;RO=87;RPL=0;RPP=259.244;RPPR=191.928;RPR=118;RUN=1;SAF=118;SAP=259.244;SAR=0;SRF=87;SRP=191.928;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:74:28,46:28:1129:46:1804:-140.298,0,-79.6157 0/1:24:7,17:7:276:17:684:-54.6655,0,-17.9812 0/1:26:7,19:7:280:19:750:-59.995,0,-17.7448 0/1:40:15,25:15:609:25:999:-78.1654,0,-43.1064 0/1:21:18,3:18:717:3:122:-5.05086,0,-58.5335 0/1:20:12,8:12:474:8:314:-22.6034,0,-36.9851 dDocent_Contig_2375 11 . C T 26506.7 . AB=0.224582;ABP=3632.05;AC=6;AF=0.5;AN=12;AO=1237;CIGAR=1X;DP=5508;DPB=5508;DPRA=0;EPP=2689.12;EPPR=9273.03;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=59.9967;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999192;PAIREDR=0.999297;PAO=0;PQA=0;PQR=0;PRO=0;QA=48022;QR=170609;RO=4269;RPL=0;RPP=2689.12;RPPR=9273.03;RPR=1237;RUN=1;SAF=1237;SAP=2689.12;SAR=0;SRF=4269;SRP=9273.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:725:540,185:540:21605:185:7210:-430.42,0,-1724.32 0/1:1055:715,340:715:28581:340:13221:-871.528,0,-2252.05 0/1:536:432,104:432:17252:104:4025:-200.942,0,-1389.9 0/1:879:645,233:645:25734:233:8973:-542.485,0,-2049.08 0/1:1281:1143,138:1143:45786:138:5380:-98.5043,0,-3730.68 0/1:1032:794,237:794:31651:237:9213:-518.012,0,-2534.92 dDocent_Contig_2376 63 . C T 11305.9 . AB=0.0459231;ABP=1913.91;AC=0;AF=0;AN=12;AO=49;CIGAR=28M1X;DP=1476;DPB=1405.83;DPRA=0;EPP=45.5977;EPPR=666.587;GTI=0;LEN=1;MEANALT=21.5;MQM=60;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1870;QR=12859;RO=333;RPL=9;RPP=45.5977;RPPR=666.587;RPR=40;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=333;SRP=726.111;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:225:52,26,0,2,23,0,11,17,54,13:52:2024:26,0,2,23,0,11,17,54,13:864,0,81,875,0,387,617,2080,485:-155.113,-100.877,-259.393,-170.767,-267.22,-337.111,-164.087,-260.541,-330.431,-329.829,-99.0084,-195.464,-265.354,-258.674,-258.43,-170.767,-267.22,-337.111,-330.431,-265.354,-337.111,-139.269,-235.723,-305.613,-298.933,-233.856,-305.613,-302.302,-120.395,-216.85,-286.74,-280.06,-214.983,-286.74,-255.242,-281.622,0,-96.4594,-166.349,-159.669,-94.5911,-166.349,-134.851,-115.978,-150.093,-131.06,-227.515,-297.405,-290.725,-225.648,-297.405,-265.907,-247.034,-126.643,-293.492 0|0:309:33,11,0,1,37,21,40,38,95,10:33:1285:11,0,1,37,21,40,38,95,10:393,0,36,1364,785,1355,1319,3715,367:-301.395,-279.289,-381.591,-311.329,-384.902,-416.942,-308.391,-381.965,-414.005,-413.704,-199.801,-273.375,-305.414,-302.477,-294.276,-247.054,-320.628,-352.668,-349.73,-241.14,-346.346,-201.487,-275.06,-307.1,-304.163,-195.573,-242.826,-295.059,-204.143,-277.717,-309.757,-306.819,-198.229,-245.482,-199.916,-298.317,-5.91341,-79.4897,-111.53,-108.592,0,-47.254,-1.68775,-4.34371,-82.9319,-281.334,-354.907,-386.947,-384.01,-275.419,-322.672,-277.105,-279.762,-81.5342,-383.937 0|0:254:62,29,0,4,8,6,11,23,77,2:62:2377:29,0,4,8,6,11,23,77,2:999,0,138,314,218,384,856,2960,80:-224.305,-161.842,-348.192,-242.969,-356.921,-438.049,-231.759,-345.712,-426.839,-425.635,-217.143,-331.096,-412.224,-401.014,-409.816,-225.17,-339.123,-420.251,-409.041,-394.425,-418.444,-211.748,-325.7,-406.828,-395.618,-381.003,-389.029,-403.517,-172.919,-286.873,-368,-356.79,-342.174,-350.201,-336.779,-361.076,0,-113.959,-195.086,-183.876,-169.26,-177.287,-163.865,-125.036,-171.907,-236.378,-350.331,-431.459,-420.249,-405.633,-413.66,-400.238,-361.41,-188.495,-430.857 0|0:279:39,41,0,1,20,6,11,19,75,24:39:1497:41,0,1,20,6,11,19,75,24:1379,0,35,736,216,410,681,2866,938:-223.373,-123.411,-233.946,-235.113,-246.289,-357.991,-232.266,-243.441,-355.143,-354.842,-174.955,-186.13,-297.832,-294.985,-291.812,-217.493,-228.669,-340.371,-337.523,-280.212,-338.565,-201.549,-212.724,-324.426,-321.579,-264.268,-306.806,-321.115,-179.584,-190.759,-302.461,-299.613,-242.303,-284.841,-268.897,-296.742,0,-11.1786,-122.88,-120.032,-62.7209,-105.26,-89.3152,-67.3499,-100.303,-158.001,-169.176,-280.879,-278.031,-220.72,-263.259,-247.314,-225.349,-45.7662,-273.654 0|0:224:62,0,10,51,0,10,2,0,14,0:62:2400:0,10,51,0,10,2,0,14,0:0,390,1943,0,364,75,0,544,0:-140.688,-159.352,-356.493,-127.294,-324.436,-321.426,0,-197.143,-165.085,-181.791,-159.352,-356.493,-324.436,-197.143,-356.493,-129.626,-326.767,-294.709,-167.417,-326.767,-323.757,-153.209,-350.35,-318.293,-191,-350.35,-320.624,-349.748,-159.352,-356.493,-324.436,-197.143,-356.493,-326.767,-350.35,-356.493,-114.658,-311.8,-279.743,-152.45,-311.8,-282.074,-305.657,-311.8,-307.586,-159.352,-356.493,-324.436,-197.143,-356.493,-326.767,-350.35,-356.493,-311.8,-356.493 0|0:185:85,2,22,10,0,0,0,0,38,0:85:3276:2,22,10,0,0,0,0,38,0:71,803,361,0,0,0,0,1490,0:-96.939,-116.742,-385.133,-56.9354,-320.143,-319.305,-93.0709,-356.279,-296.472,-359.054,-122.527,-385.735,-325.928,-362.064,-391.52,-122.527,-385.735,-325.928,-362.064,-391.52,-391.52,-122.527,-385.735,-325.928,-362.064,-391.52,-391.52,-391.52,-122.527,-385.735,-325.928,-362.064,-391.52,-391.52,-391.52,-391.52,0,-263.215,-203.408,-239.544,-269,-269,-269,-269,-257.561,-122.527,-385.735,-325.928,-362.064,-391.52,-391.52,-391.52,-391.52,-269,-391.52 dDocent_Contig_2377 76 . T C 8789.55 . AB=0.488673;ABP=3.69899;AC=4;AF=0.333333;AN=12;AO=302;CIGAR=1X;DP=954;DPB=954;DPRA=0.919643;EPP=658.795;EPPR=1416.64;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11897;QR=25417;RO=651;RPL=302;RPP=658.795;RPPR=1416.64;RPR=0;RUN=1;SAF=302;SAP=658.795;SAR=0;SRF=651;SRP=1416.64;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:157:157,0:157:6145:0:0:0,-47.2617,-552.862 0/1:181:162,18:162:6335:18:695:-8.30451,0,-515.404 0/1:95:87,8:87:3410:8:323:-0.841108,0,-278.379 0/0:179:179,0:179:6979:0:0:0,-53.8844,-627.856 0/1:274:32,242:32:1271:242:9545:-776.014,0,-32.18 0/1:68:34,34:34:1277:34:1334:-99.8538,0,-94.7216 dDocent_Contig_2378 19 . G C 11423 . AB=0.353188;ABP=226.169;AC=4;AF=0.333333;AN=12;AO=431;CIGAR=1X;DP=1893;DPB=1893;DPRA=0.891066;EPP=938.915;EPPR=3177.7;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=17165;QR=58128;RO=1462;RPL=0;RPP=938.915;RPPR=3177.7;RPR=431;RUN=1;SAF=431;SAP=938.915;SAR=0;SRF=1462;SRP=3177.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:255:135,120:135:5379:120:4757:-351.272,0,-407.182 0/1:320:185,135:185:7278:135:5368:-386.642,0,-558.342 0/1:335:273,62:273:10863:62:2495:-123.835,0,-876.101 0/1:282:178,104:178:7117:104:4141:-287.774,0,-555.296 0/0:347:347,0:347:13782:0:0:0,-104.457,-1239.37 0/0:354:344,10:344:13709:10:404:0,-69.8442,-1196.06 dDocent_Contig_2379 92 . G A 66.0828 . AB=0.166667;ABP=37.7539;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=236;DPB=236;DPRA=0.9;EPP=16.0391;EPPR=500.277;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.951965;PAO=0;PQA=0;PQR=0;PRO=0;QA=207;QR=7689;RO=229;RPL=6;RPP=16.0391;RPPR=500.277;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=229;SRP=500.277;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:35,0:35:1180:0:0:0,-10.536,-106.425 0/0:52:52,0:52:1739:0:0:0,-15.6536,-156.795 0/0:37:37,0:37:1254:0:0:0,-11.1381,-113.16 0/1:36:30,6:30:1014:6:207:-8.13116,0,-80.7305 0/0:34:34,0:34:1135:0:0:0,-10.235,-102.45 0/0:41:41,0:41:1367:0:0:0,-12.3422,-123.323 dDocent_Contig_2380 70 . T G 19673.3 . AB=0.653962;ABP=208.285;AC=6;AF=0.5;AN=12;AO=652;CIGAR=1X;DP=997;DPB=997;DPRA=0;EPP=1418.81;EPPR=749.997;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998466;PAIREDR=0.982558;PAO=0;PQA=0;PQR=0;PRO=0;QA=25320;QR=13238;RO=344;RPL=652;RPP=1418.81;RPPR=749.997;RPR=0;RUN=1;SAF=652;SAP=1418.81;SAR=0;SRF=344;SRP=749.997;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:76:25,51:25:954:51:1966:-154.268,0,-63.2877 0/1:145:41,104:41:1573:104:4065:-322.2,0,-98.1756 0/1:89:40,49:40:1569:49:1912:-145.501,0,-114.66 0/1:106:34,72:34:1280:72:2837:-223.547,0,-83.5578 0/1:348:125,223:125:4839:223:8614:-670.092,0,-330.713 0/1:233:79,153:79:3023:153:5926:-462.947,0,-201.962 dDocent_Contig_2381 38 . C A 85.3592 . AB=0.25;ABP=11.6962;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=163;DPB=163;DPRA=0.650407;EPP=13.8677;EPPR=346.103;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=202;QR=6364;RO=158;RPL=0;RPP=13.8677;RPPR=346.103;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=158;SRP=346.103;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:731:0:0:0,-5.41854,-66.114 0/0:27:27,0:27:1088:0:0:0,-8.12781,-98.2048 0/0:24:23,1:23:934:1:41:0,-3.13015,-80.2665 0/1:16:12,4:12:483:4:161:-10.0588,0,-39.0035 0/0:44:44,0:44:1769:0:0:0,-13.2453,-159.424 0/0:34:34,0:34:1359:0:0:0,-10.235,-122.556 dDocent_Contig_2382 19 . T C 172.322 . AB=0.10084;ABP=661.751;AC=3;AF=0.25;AN=12;AO=76;CIGAR=1X;DP=935;DPB=935;DPRA=0;EPP=168.042;EPPR=1868.31;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2870;QR=31124;RO=859;RPL=0;RPP=168.042;RPPR=1868.31;RPR=76;RUN=1;SAF=76;SAP=168.042;SAR=0;SRF=859;SRP=1868.31;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:48,2:48:1739:2:76:0,-7.83683,-149.562 0/0:238:225,13:225:8136:13:485:0,-27.6543,-688.169 0/1:163:146,17:146:5304:17:657:-10.3982,0,-428.354 0/1:188:168,20:168:6063:20:737:-10.0528,0,-489.108 0/0:171:158,13:158:5686:13:494:0,-6.67023,-466.983 0/1:125:114,11:114:4196:11:421:-0.613849,0,-340.133 dDocent_Contig_2383 60 . T A 51.0758 . AB=0.1;ABP=128.087;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=229;DPB=229;DPRA=1.29496;EPP=22.5536;EPPR=438.292;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.45;NS=6;NUMALT=1;ODDS=0;PAIRED=0.444444;PAIREDR=0.459091;PAO=0;PQA=0;PQR=0;PRO=0;QA=367;QR=8755;RO=220;RPL=9;RPP=22.5536;RPPR=480.734;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=215;SRP=438.292;SRR=5;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1629:0:0:0,-12.3422,-145.038 0/0:50:50,0:50:1979:0:0:0,-15.0515,-177.975 0/0:17:17,0:17:685:0:0:0,-5.11751,-61.9802 0/0:31:31,0:31:1225:0:0:0,-9.33193,-110.109 0/1:62:57,5:57:2281:5:204:-0.0801727,0,-186.793 0/1:28:24,4:24:956:4:163:-6.62959,0,-77.9121 dDocent_Contig_2384 98 . N G 154.51 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=8.07091;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=168;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:168:-15.4509,-1.50515,0 ./.:.:.:.:.:.:.:. dDocent_Contig_2385 107 . N C 88.0277 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=84;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 1/1:2:0,2:0:0:2:46:-4.36869,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:11:-1.09999,-0.30103,0 1/1:1:0,1:0:0:1:20:-1.99996,-0.30103,0 dDocent_Contig_2386 35 . A G 93401 . AB=0.911504;ABP=667.827;AC=11;AF=0.916667;AN=12;AO=2676;CIGAR=1X;DP=2747;DPB=2747;DPRA=0;EPP=5813.87;EPPR=157.185;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998505;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=106590;QR=2780;RO=71;RPL=0;RPP=5813.87;RPPR=157.185;RPR=2676;RUN=1;SAF=2676;SAP=5813.87;SAR=0;SRF=71;SRP=157.185;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:452:40,412:40:1606:412:16296:-1329.33,0,-8.70585 1/1:589:7,582:7:279:582:23191:-2059.7,-151.826,0 1/1:335:3,332:3:120:332:13169:-1173.06,-89.6577,0 1/1:516:12,504:12:461:504:20079:-1763.59,-113.497,0 1/1:416:0,416:0:0:416:16635:-1495.82,-125.228,0 1/1:439:9,430:9:314:430:17220:-1519.83,-103.573,0 dDocent_Contig_2387 28 . A G 4150.31 . AB=0.0597826;ABP=312.728;AC=0;AF=0;AN=12;AO=11;CIGAR=2X1M1X;DP=617;DPB=617;DPRA=2.79848;EPP=26.8965;EPPR=993.202;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.989035;PAO=0;PQA=0;PQR=0;PRO=0;QA=425;QR=18050;RO=456;RPL=0;RPP=26.8965;RPPR=993.202;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=456;SRP=993.202;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:91:91,0,0:91:3617:0,0:0,0:0,-27.3937,-325.568,-27.3937,-325.568,-325.568 0|0:69:69,0,0:69:2720:0,0:0,0:0,-20.7711,-244.932,-20.7711,-244.932,-244.932 0|0:39:39,0,0:39:1551:0,0:0,0:0,-11.7402,-139.836,-11.7402,-139.836,-139.836 0|0:64:64,0,0:64:2540:0,0:0,0:0,-19.2659,-228.753,-19.2659,-228.753,-228.753 0|0:184:81,11,91:81:3196:11,91:425,3552:-267.552,-257.03,-516.669,0,-228.048,-235.559 0|0:170:112,0,57:112:4426:0,57:0,2240:-150.7,-184.416,-548.615,0,-364.398,-347.239 dDocent_Contig_2388 14 . C A 323.418 . AB=0.16129;ABP=126.574;AC=3;AF=0.25;AN=12;AO=26;CIGAR=1X;DP=224;DPB=224;DPRA=0;EPP=59.4686;EPPR=432.962;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.923077;PAIREDR=0.833333;PAO=0;PQA=0;PQR=0;PRO=0;QA=1037;QR=7855;RO=198;RPL=0;RPP=59.4686;RPPR=432.962;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=198;SRP=432.962;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:21,1:21:841:1:40:0,-2.62698,-72.0083 0/0:40:38,2:38:1487:2:82:0,-4.26152,-126.294 0/1:32:28,4:28:1123:4:161:-5.24231,0,-91.7185 0/0:38:35,3:35:1393:3:116:0,-0.623631,-114.809 0/1:55:42,13:42:1661:13:517:-30.3201,0,-133.153 0/1:37:34,3:34:1350:3:121:-0.141876,0,-110.623 dDocent_Contig_2390 11 . C A 18651.9 . AB=0.626159;ABP=137.246;AC=6;AF=0.5;AN=12;AO=608;CIGAR=1X;DP=971;DPB=971;DPRA=0;EPP=1323.27;EPPR=791.255;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.927632;PAIREDR=0.936639;PAO=0;PQA=0;PQR=0;PRO=0;QA=24097;QR=14469;RO=363;RPL=0;RPP=1323.27;RPPR=791.255;RPR=608;RUN=1;SAF=608;SAP=1323.27;SAR=0;SRF=363;SRP=791.255;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:150:64,86:64:2555:86:3434:-263.95,0,-184.929 0/1:241:112,129:112:4509:129:5086:-385.093,0,-333.172 0/1:99:34,65:34:1340:65:2618:-205.943,0,-91.0576 0/1:172:61,111:61:2418:111:4391:-343.38,0,-165.98 0/1:153:41,112:41:1637:112:4427:-352.334,0,-101.502 0/1:156:51,105:51:2010:105:4141:-325.711,0,-134.129 dDocent_Contig_2391 21 . T G 98.0346 . AB=0.181818;ABP=32.0291;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=213;DPB=213;DPRA=0.696203;EPP=18.2106;EPPR=448.162;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.285714;PAIREDR=0.585366;PAO=0;PQA=0;PQR=0;PRO=0;QA=270;QR=8054;RO=205;RPL=0;RPP=18.2106;RPPR=448.162;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=205;SRP=448.162;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:26,6:26:1033:6:230:-11.0253,0,-83.2194 0/0:45:45,0:45:1777:0:0:0,-13.5463,-160.146 0/0:29:29,0:29:1144:0:0:0,-8.72987,-103.246 0/0:46:46,0:46:1778:0:0:0,-13.8474,-160.241 0/0:22:21,1:21:806:1:40:0,-2.62698,-68.8538 0/0:38:38,0:38:1516:0:0:0,-11.4391,-136.686 dDocent_Contig_2392 12 . T G 13573.8 . AB=0.0245902;ABP=482.016;AC=0;AF=0;AN=12;AO=28;CIGAR=1M7I2M1X2M1X;DP=951;DPB=1829;DPRA=0;EPP=63.8115;EPPR=128.956;GTI=0;LEN=1;MEANALT=13.8;MQM=38.0714;MQMR=60;NS=6;NUMALT=4;ODDS=1.11022e-16;PAIRED=0.392857;PAIREDR=0.0344828;PAO=0;PQA=0;PQR=0;PRO=0;QA=1100;QR=2289;RO=58;RPL=0;RPP=63.8115;RPPR=128.956;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=58;SRP=128.956;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:98:9,1,2,68,0:9:357:1,2,68,0:40,38,1904,0:-132.891,-133.002,-162.1,-133.259,-160.06,-162.056,0,-26.8211,-27.0868,-8.94905,-135.6,-162.401,-162.658,-29.4191,-164.999 0|0:133:24,0,1,65,7:24:946:0,1,65,7:0,39,1905,273:-131.76,-138.984,-216.83,-135.778,-213.623,-213.322,0,-77.8517,-74.6452,-58.2848,-116.598,-194.446,-191.239,-55.4676,-192.339 0|0:146:9,5,8,92,7:9:355:5,8,92,7:196,286,2953,277:-215.238,-203.915,-231.624,-196.513,-211.696,-223.319,0,-15.1891,-7.78891,-1.52573,-195.155,-210.338,-202.936,-6.42468,-222.263 0|0:126:5,1,0,84,0:5:199:1,0,84,0:40,0,2623,0:-196.792,-195.699,-211.788,-198.297,-212.089,-214.687,-8.89193,-22.689,-25.2865,0,-198.297,-212.089,-214.687,-25.2865,-214.687 0|0:262:2,16,2,205,0:2:79:16,2,205,0:630,72,5151,0:-411.903,-370.132,-371.818,-407.168,-371.298,-413.068,-55.2081,-19.3473,-56.3752,0,-412.505,-376.635,-413.67,-61.7112,-419.007 0|0:186:9,5,0,139,0:9:353:5,0,139,0:194,0,3717,0:-273.519,-260.858,-288.388,-276.229,-289.893,-305.264,-12.8019,-26.4714,-41.8432,0,-276.229,-289.893,-305.264,-41.8432,-305.264 dDocent_Contig_2393 21 . C T 225.993 . AB=0.129213;ABP=215.571;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1X;DP=532;DPB=532;DPRA=1.00565;EPP=52.9542;EPPR=1108.29;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992141;PAO=0;PQA=0;PQR=0;PRO=0;QA=874;QR=20171;RO=509;RPL=0;RPP=52.9542;RPPR=1108.29;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=509;SRP=1108.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:96:87,9:87:3414:9:341:-2.14693,0,-278.421 0/0:83:83,0:83:3288:0:0:0,-24.9855,-295.987 0/0:60:60,0:60:2390:0:0:0,-18.0618,-215.255 0/1:82:68,14:68:2696:14:533:-23.6255,0,-218.076 0/0:108:108,0:108:4299:0:0:0,-32.5112,-386.868 0/0:103:103,0:103:4084:0:0:0,-31.0061,-367.551 dDocent_Contig_2394 62 . A G 146.231 . AB=0.105263;ABP=285.873;AC=1;AF=0.0833333;AN=12;AO=73;CIGAR=1X;DP=1321;DPB=1321;DPRA=3.87454;EPP=161.528;EPPR=2713.01;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.99359;PAO=0;PQA=0;PQR=0;PRO=0;QA=2846;QR=49673;RO=1248;RPL=73;RPP=161.528;RPPR=2713.01;RPR=0;RUN=1;SAF=73;SAP=161.528;SAR=0;SRF=1248;SRP=2713.01;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:333:318,15:318:12629:15:556:0,-49.88,-1085.36 0/0:508:472,36:472:18838:36:1415:0,-25.3247,-1566.26 0/0:202:202,0:202:8071:0:0:0,-60.8081,-725.954 0/1:209:187,22:187:7366:22:875:-16.1459,0,-599.681 0/0:22:22,0:22:883:0:0:0,-6.62266,-79.7776 0/0:47:47,0:47:1886:0:0:0,-14.1484,-169.94 dDocent_Contig_2395 7 . T G 136991 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=4775;CIGAR=1X;DP=4939;DPB=4939;DPRA=0;EPP=10371.8;EPPR=324.388;GTI=0;LEN=1;MEANALT=2.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.865759;PAIREDR=0.824324;PAO=0;PQA=0;PQR=0;PRO=0;QA=154276;QR=2004;RO=148;RPL=0;RPP=10371.8;RPPR=324.388;RPR=4775;RUN=1;SAF=4775;SAP=10371.8;SAR=0;SRF=148;SRP=324.388;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:699:18,680:18:280:680:22035:-1957.07,-184.956,0 1/1:1038:34,999:34:426:999:32204:-2858.72,-272.625,0 1/1:796:21,772:21:319:772:24953:-2216.03,-209.989,0 1/1:783:26,754:26:312:754:24356:-2162.99,-206.715,0 1/1:770:24,744:24:316:744:24139:-2143.09,-202.856,0 1/1:853:25,826:25:351:826:26589:-2360.35,-224.633,0 dDocent_Contig_2396 59 . T C 21433.3 . AB=0.450885;ABP=37.3524;AC=6;AF=0.5;AN=12;AO=739;CIGAR=1X;DP=1639;DPB=1639;DPRA=0;EPP=1607.73;EPPR=1957.34;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998647;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=29429;QR=35584;RO=900;RPL=739;RPP=1607.73;RPPR=1957.34;RPR=0;RUN=1;SAF=739;SAP=1607.73;SAR=0;SRF=900;SRP=1957.34;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:243:124,119:124:4917:119:4707:-350.406,0,-369.272 0/1:288:154,134:154:6032:134:5311:-391.139,0,-455.995 0/1:117:61,56:61:2396:56:2253:-167.706,0,-180.574 0/1:213:90,123:90:3553:123:4863:-373.444,0,-255.693 0/1:361:268,93:268:10646:93:3714:-225.599,0,-848.782 0/1:417:203,214:203:8040:214:8581:-646.255,0,-597.647 dDocent_Contig_2397 96 . T G 64999.9 . AB=0.845343;ABP=1771.28;AC=8;AF=0.666667;AN=12;AO=2353;CIGAR=1X;DP=2646;DPB=2646;DPRA=0;EPP=5112.48;EPPR=637.08;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.99915;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=78931;QR=9906;RO=292;RPL=2353;RPP=5112.48;RPPR=637.08;RPR=0;RUN=1;SAF=2353;SAP=5112.48;SAR=0;SRF=292;SRP=637.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:449:23,426:23:788:426:14274:-1213.33,-63.9256,0 0/1:460:59,401:59:2030:401:13512:-1077.53,0,-44.5035 0/1:258:50,208:50:1728:208:6984:-551.014,0,-78.1402 0/1:416:96,320:96:3282:320:10800:-846.775,0,-170.387 0/1:573:59,514:59:1957:514:17117:-1367.87,0,-3.90899 1/1:490:5,484:5:121:484:16244:-1450.7,-136.207,0 dDocent_Contig_2398 160 . T C 20388.7 . AB=0.0848214;ABP=673.763;AC=0;AF=0;AN=12;AO=38;CIGAR=1X3M1X;DP=1160;DPB=1160;DPRA=0;EPP=85.5263;EPPR=854.227;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1419;QR=15061;RO=392;RPL=38;RPP=85.5263;RPPR=854.227;RPR=0;RUN=1;SAF=0;SAP=85.5263;SAR=38;SRF=0;SRP=854.227;SRR=392;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:100:16,0,84:16:615:0,84:0,3077:-247.001,-251.817,-302.306,0,-50.8698,-25.5833 0|0:229:20,2,205:20:762:2,205:76,7554:-611.635,-611.423,-673.325,0,-56.2655,-0.787141 0|0:60:7,0,53:7:264:0,53:0,1949:-157.591,-159.698,-181.333,0,-22.0108,-6.05618 0|0:219:62,36,119:62:2409:36,119:1343,4309:-333.059,-241.776,-428.9,0,-88.0235,-162.14 0|0:298:154,0,142:154:5884:0,142:0,5236:-381.916,-428.275,-911.031,0,-482.874,-440.128 0|0:254:133,0,120:133:5127:0,120:0,4377:-317.671,-357.708,-778.713,0,-421.187,-385.064 dDocent_Contig_2399 24 . T A 458.584 . AB=0.109121;ABP=817.843;AC=2;AF=0.166667;AN=12;AO=67;CIGAR=1X;DP=1160;DPB=1160;DPRA=2.24908;EPP=148.499;EPPR=2369.92;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.950459;PAO=0;PQA=0;PQR=0;PRO=0;QA=2591;QR=40968;RO=1090;RPL=0;RPP=148.499;RPPR=2369.92;RPR=67;RUN=1;SAF=67;SAP=148.499;SAR=0;SRF=1090;SRP=2369.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:147:147,0:147:5564:0:0:0,-44.2514,-500.705 0/0:217:215,0:215:8162:0:0:0,-64.7214,-734.214 0/0:48:48,0:48:1819:0:0:0,-14.4494,-163.946 0/0:134:134,0:134:4984:0:0:0,-40.338,-448.542 0/1:234:206,27:206:7843:27:1048:-24.3503,0,-635.385 0/1:380:340,40:340:12596:40:1543:-24.7299,0,-1018.77 dDocent_Contig_2400 38 . T G 4378.24 . AB=0.166773;ABP=1518.22;AC=3;AF=0.25;AN=12;AO=329;CIGAR=2X;DP=3133;DPB=3133;DPRA=0;EPP=717.425;EPPR=6083.13;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=12752;QR=110707;RO=2800;RPL=0;RPP=717.425;RPPR=6083.13;RPR=329;RUN=1;SAF=329;SAP=717.425;SAR=0;SRF=2800;SRP=6083.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:370:339,31:339:13336:31:1200:0,-3.09419,-1091.03 0|1:575:510,64:510:20058:64:2510:-52.8748,0,-1630.46 0|1:452:316,136:316:12520:136:5267:-337.92,0,-989.87 0|1:544:482,62:482:18980:62:2398:-52.2511,0,-1542.96 0|0:635:609,26:609:24142:26:991:0,-101.657,-2081.3 0|0:557:544,10:544:21671:10:386:0,-131.941,-1913.51 dDocent_Contig_2401 13 . G A 109.33 . AB=0.147541;ABP=68.8308;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=239;DPB=239;DPRA=0.959016;EPP=26.8965;EPPR=498.106;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.454545;PAIREDR=0.447368;PAO=0;PQA=0;PQR=0;PRO=0;QA=435;QR=9095;RO=228;RPL=0;RPP=26.8965;RPPR=498.106;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=228;SRP=498.106;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1339:0:0:0,-9.93399,-120.767 0/0:56:54,2:54:2124:2:82:0,-9.078,-183.563 0/1:27:23,4:23:908:4:152:-5.91935,0,-73.8976 0/1:34:29,5:29:1157:5:201:-8.2355,0,-94.1748 0/0:33:33,0:33:1320:0:0:0,-9.93399,-119.06 0/0:56:56,0:56:2247:0:0:0,-16.8577,-202.393 dDocent_Contig_2402 90 . G T 106.924 . AB=0.142857;ABP=111.584;AC=3;AF=0.25;AN=12;AO=18;CIGAR=1X;DP=221;DPB=221;DPRA=0.702041;EPP=42.0968;EPPR=443.819;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=40;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=656;QR=7438;RO=203;RPL=18;RPP=42.0968;RPPR=443.819;RPR=0;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=203;SRP=443.819;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:33,2:33:1171:2:63:0,-4.7347,-95.8814 0/1:56:48,8:48:1703:8:285:-8.13761,0,-130.811 0/1:27:24,3:24:921:3:117:-2.08133,0,-70.1267 0/0:49:49,0:49:1824:0:0:0,-14.7505,-155.645 0/0:39:37,2:37:1371:2:75:0,-4.99459,-110.551 0/1:15:12,3:12:448:3:116:-5.63906,0,-34.0716 dDocent_Contig_2403 7 . A T 139014 . AB=0.386544;ABP=596.263;AC=12;AF=1;AN=12;AO=2051;CIGAR=1X3M;DP=5306;DPB=5306;DPRA=0;EPP=4456.7;EPPR=741.311;GTI=0;LEN=1;MEANALT=5.66667;MQM=59.4076;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.934178;PAIREDR=0.897059;PAO=0;PQA=0;PQR=0;PRO=0;QA=77763;QR=12945;RO=340;RPL=0;RPP=4456.7;RPPR=741.311;RPR=2051;RUN=1;SAF=2051;SAP=4456.7;SAR=0;SRF=340;SRP=741.311;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:731:35,364,321:35:1336:364,321:13926,11955:-1988.27,-865.199,-865.235,-1024,0,-1036.98 1|1:957:51,500,386:51:1954:500,386:19052,14710:-2566.45,-1045.05,-1054.9,-1376.38,0,-1420.56 1|1:1041:62,554,401:62:2360:554,401:21210,15208:-2752.13,-1053.08,-1079.88,-1524.14,0,-1597 1|1:787:58,402,317:58:2185:402,317:15372,12121:-2042.07,-815.474,-873.501,-1065.02,0,-1148.64 1|1:983:72,561,340:72:2738:561,340:21395,12945:-2507.64,-836.067,-891.744,-1468.69,0,-1590.9 1|1:807:62,449,286:62:2372:449,286:17132,10824:-2056.07,-690.5,-749.987,-1189.58,0,-1298.14 dDocent_Contig_2404 7 . T C 665.466 . AB=0.122592;ABP=709.446;AC=3;AF=0.25;AN=12;AO=89;CIGAR=1X;DP=1142;DPB=1142;DPRA=1.26235;EPP=196.271;EPPR=2242;GTI=0;LEN=1;MEANALT=1.5;MQM=52.9775;MQMR=55.3539;NS=6;NUMALT=1;ODDS=0;PAIRED=0.011236;PAIREDR=0.32255;PAO=0;PQA=0;PQR=0;PRO=0;QA=3437;QR=40233;RO=1051;RPL=0;RPP=196.271;RPPR=2285.23;RPR=89;RUN=1;SAF=89;SAP=196.271;SAR=0;SRF=1046;SRP=2242;SRR=5;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:157:133,24:133:5094:24:930:-36.5824,0,-404.567 0/0:247:227,19:227:8695:19:729:0,-9.42281,-706.416 0/1:146:125,20:125:4804:20:780:-26.1493,0,-379.605 0/1:268:242,26:242:9280:26:998:-9.03679,0,-744.366 0/0:141:141,0:141:5400:0:0:0,-42.4452,-480.171 0/0:183:183,0:183:6960:0:0:0,-55.0885,-622.471 dDocent_Contig_2405 115 . T A 298.155 . AB=0.159763;ABP=172.938;AC=3;AF=0.25;AN=12;AO=35;CIGAR=1X2M1X;DP=338;DPB=338;DPRA=0;EPP=79.0118;EPPR=619.708;GTI=0;LEN=1;MEANALT=2.83333;MQM=53.5429;MQMR=59.4613;NS=6;NUMALT=2;ODDS=0;PAIRED=0.628571;PAIREDR=0.954225;PAO=0;PQA=0;PQR=0;PRO=0;QA=1183;QR=9461;RO=284;RPL=0;RPP=79.0118;RPPR=619.708;RPR=35;RUN=1;SAF=0;SAP=79.0118;SAR=35;SRF=0;SRP=619.708;SRR=284;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:43:33,6,3:33:1113:6,3:207,105:-6.87647,0,-86.6415,-8.26552,-79.903,-95.8139 0|0:33:30,1,1:30:930:1,1:34,35:0,-6.23494,-80.6614,-6.13476,-78.1132,-80.5662 0|0:86:78,6,2:78:2580:6,2:202,67:0,-7.14202,-213.975,-18.0545,-210.355,-226.091 0|1:54:40,10,1:40:1369:10,1:324,35:-14.0742,0,-108.174,-23.2646,-108.336,-134.116 0|1:72:56,11,0:56:1891:11,0:381,0:-14.0867,0,-149.992,-30.9444,-153.304,-184.223 0|0:50:47,1,0:47:1578:1,0:35,0:0,-11.2608,-136.827,-14.1484,-137.128,-139.97 dDocent_Contig_2406 73 . G A 2363.15 . AB=0.221843;ABP=396.825;AC=5;AF=0.416667;AN=12;AO=142;CIGAR=1X;DP=826;DPB=826;DPRA=0;EPP=311.359;EPPR=1488.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998538;PAO=0;PQA=0;PQR=0;PRO=0;QA=5098;QR=23754;RO=684;RPL=142;RPP=311.359;RPPR=1488.3;RPR=0;RUN=1;SAF=142;SAP=311.359;SAR=0;SRF=684;SRP=1488.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:240:228,12:228:7838:12:427:0,-33.48,-666.644 0/1:187:154,33:154:5265:33:1122:-44.9721,0,-417.658 0/1:96:79,17:79:2821:17:622:-27.4135,0,-225.208 0/1:95:79,16:79:2727:16:587:-24.5667,0,-217.049 0/1:91:68,23:68:2399:23:845:-48.9751,0,-188.748 0/1:117:76,41:76:2704:41:1495:-99.6092,0,-208.364 dDocent_Contig_2407 21 . G A 340.335 . AB=0.123596;ABP=331.586;AC=1;AF=0.0833333;AN=12;AO=43;CIGAR=1X1M1X;DP=1093;DPB=1093;DPRA=1.4534;EPP=96.3836;EPPR=2278.71;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.907443;PAO=0;PQA=0;PQR=0;PRO=0;QA=1674;QR=39776;RO=1048;RPL=0;RPP=96.3836;RPPR=2278.71;RPR=43;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=1048;SRP=2278.71;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:129:129,0:129:4926:0:0:0,-38.8329,-443.367 0|0:168:168,0:168:6368:0:0:0,-50.573,-573.056 0|0:190:190,0:190:7197:0:0:0,-57.1957,-647.594 0|0:146:144,0:144:5464:0:0:0,-43.3483,-491.598 0|1:267:234,33:234:8863:33:1285:-35.5564,0,-717.04 0|0:193:183,10:183:6958:10:389:0,-22.7327,-590.732 dDocent_Contig_2408 98 . N G 207.806 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=7;CIGAR=2X;DP=7;DPB=91.5;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=57.4286;MQMR=0;NS=3;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0;PAO=79;PQA=2542;PQR=0;PRO=0;QA=226;QR=0;RO=0;RPL=7;RPP=18.2106;RPPR=0;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:68:-6.07512,-0.60206,0 .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:67:-6.03733,-0.60206,0 .:.:.:.:.:.:.:. 1|1:3:0,3:0:0:3:91:-8.19008,-0.90309,0 dDocent_Contig_2411 134 . T A 2544.66 . AB=0.204666;ABP=1431.85;AC=6;AF=0.5;AN=12;AO=386;CIGAR=1X;DP=1886;DPB=1886;DPRA=0;EPP=832.535;EPPR=3090.56;GTI=0;LEN=1;MEANALT=1.5;MQM=26.1062;MQMR=59.5626;NS=6;NUMALT=1;ODDS=0;PAIRED=0.246114;PAIREDR=0.589417;PAO=0;PQA=0;PQR=0;PRO=0;QA=13277;QR=54219;RO=1493;RPL=386;RPP=841.199;RPPR=3245.02;RPR=0;RUN=1;SAF=385;SAP=832.535;SAR=1;SRF=18;SRP=3090.56;SRR=1475;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:267:216,49:216:7852:49:1723:-24.9469,0,-626.474 0/1:400:294,106:294:10627:106:3599:-106.11,0,-834.746 0/1:262:210,52:210:7542:52:1794:-26.3421,0,-584.451 0/1:411:340,67:340:12358:67:2313:-19.6993,0,-989.065 0/1:299:237,62:237:8667:62:2130:-49.7194,0,-689.752 0/1:247:196,50:196:7173:50:1718:-38.8694,0,-566.12 dDocent_Contig_2413 19 . A T 162.402 . AB=0.111111;ABP=251.282;AC=1;AF=0.0833333;AN=12;AO=27;CIGAR=1X;DP=703;DPB=703;DPRA=1.30824;EPP=61.6401;EPPR=1470.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1062;QR=26124;RO=676;RPL=0;RPP=61.6401;RPPR=1470.93;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=676;SRP=1470.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:73:73,0:73:2838:0:0:0,-21.9752,-255.558 0/0:89:83,6:83:3225:6:236:0,-5.17919,-268.743 0/1:189:168,21:168:6494:21:826:-17.763,0,-527.395 0/0:96:96,0:96:3715:0:0:0,-28.8989,-334.426 0/0:154:154,0:154:5978:0:0:0,-46.3586,-537.873 0/0:102:102,0:102:3874:0:0:0,-30.7051,-348.727 dDocent_Contig_2414 19 . A T 24152.4 . AB=0.304484;ABP=1165.45;AC=6;AF=0.5;AN=12;AO=1066;CIGAR=1X;DP=3501;DPB=3501;DPRA=0;EPP=2317.8;EPPR=5288.37;GTI=0;LEN=1;MEANALT=1.16667;MQM=40.4812;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=42698;QR=97171;RO=2434;RPL=0;RPP=2317.8;RPPR=5288.37;RPR=1066;RUN=1;SAF=1066;SAP=2317.8;SAR=0;SRF=2434;SRP=5288.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:484:349,135:349:13842:135:5380:-295.306,0,-1099.05 0/1:619:414,205:414:16584:205:8269:-501.461,0,-1304.89 0/1:507:250,257:250:9959:257:10312:-666.115,0,-743.052 0/1:555:292,263:292:11736:263:10565:-686.299,0,-888.312 0/1:752:645,106:645:25757:106:4200:-134.033,0,-2089.59 0/1:584:484,100:484:19293:100:3972:-143.247,0,-1558.94 dDocent_Contig_2415 7 . T C 403.466 . AB=0.283582;ABP=30.2671;AC=4;AF=0.333333;AN=12;AO=20;CIGAR=1X;DP=101;DPB=101;DPRA=1.0625;EPP=38.1882;EPPR=178.9;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=768;QR=3077;RO=81;RPL=0;RPP=46.4397;RPPR=178.9;RPR=20;RUN=1;SAF=19;SAP=38.1882;SAR=1;SRF=81;SRP=178.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:17,1:17:655:1:32:0,-2.21923,-56.0868 0/1:12:7,5:7:262:5:192:-14.0376,0,-20.3234 0/1:19:13,6:13:495:6:234:-15.7115,0,-39.1768 0/1:22:16,6:16:608:6:232:-14.6256,0,-48.4327 0/1:14:12,2:12:461:2:78:-3.18905,0,-37.6261 0/0:16:16,0:16:596:0:0:0,-4.81648,-53.9732 dDocent_Contig_2416 9 . A G 342.727 . AB=0.147541;ABP=200.472;AC=3;AF=0.25;AN=12;AO=27;CIGAR=1X;DP=336;DPB=336;DPRA=1.19608;EPP=61.6401;EPPR=673.995;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1039;QR=11788;RO=309;RPL=0;RPP=61.6401;RPPR=673.995;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=309;SRP=673.995;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:55:47,8:47:1799:8:306:-11.3438,0,-145.609 0/1:94:81,13:81:3096:13:506:-17.5925,0,-250.506 0/0:81:81,0:81:3098:0:0:0,-24.3834,-278.979 0/1:34:28,6:28:1078:6:227:-10.5582,0,-87.0914 0/0:45:45,0:45:1695:0:0:0,-13.5463,-152.812 0/0:27:27,0:27:1022:0:0:0,-8.12781,-92.2844 dDocent_Contig_2417 32 . G A 3667.16 . AB=0.125954;ABP=321.405;AC=3;AF=0.25;AN=12;AO=35;CIGAR=13M1X5M;DP=300;DPB=302.632;DPRA=0;EPP=79.0118;EPPR=300.502;GTI=0;LEN=1;MEANALT=3.33333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1393;QR=5350;RO=137;RPL=0;RPP=79.0118;RPPR=300.502;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=137;SRP=300.502;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:20:17,0,2,0:17:663:0,2,0:0,81,0:-1.77133,-6.88884,-61.463,0,-54.7807,-54.1786,-6.88884,-61.463,-54.7807,-61.463 0|0:38:31,0,2,0:31:1203:0,2,0:0,78,0:0,-9.33193,-108.175,-2.91692,-101.763,-101.161,-9.33193,-108.175,-101.763,-108.175 0|1:25:19,3,3,0:19:736:3,3,0:111,120,0:-4.18057,-0.833979,-60.376,0,-51.3921,-59.5678,-9.90014,-61.2791,-60.4708,-70.3579 0|1:35:23,0,9,0:23:904:0,9,0:0,349,0:-21.7878,-28.7115,-103.083,0,-74.4168,-71.7075,-28.7115,-103.083,-74.4168,-103.083 0|0:68:23,0,11,33:23:897:0,11,33:0,443,1301:-100.105,-107.028,-180.756,-70.515,-144.243,-140.932,0,-73.722,-37.2068,-63.7881 0|0:114:24,0,8,79:24:947:0,8,79:0,322,3101:-247.814,-255.039,-332.961,-228.499,-306.422,-304.014,0,-77.9505,-51.4061,-54.1691 dDocent_Contig_2418 107 . N C 203.712 . AB=0;ABP=0;AC=8;AF=0.8;AN=10;AO=7;CIGAR=1X;DP=9;DPB=9;DPRA=2;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=208;QR=0;RO=0;RPL=0;RPP=18.2106;RPPR=0;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:1:0,0:0:0:0:0:0,0,0 1/1:2:0,1:0:0:1:23:-2.05992,-0.30103,0 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 1/1:1:0,1:0:0:1:23:-2.29991,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:93:-8.67784,-0.90309,0 dDocent_Contig_2419 7 . T A 605.054 . AB=0.321429;ABP=26.2761;AC=4;AF=0.333333;AN=12;AO=28;CIGAR=1X;DP=127;DPB=127;DPRA=1.13684;EPP=63.8115;EPPR=217.986;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.785714;PAIREDR=0.69697;PAO=0;PQA=0;PQR=0;PRO=0;QA=1056;QR=3804;RO=99;RPL=0;RPP=63.8115;RPPR=217.986;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=99;SRP=217.986;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:7,5:7:272:5:186:-13.4877,0,-21.2349 0/0:24:23,1:23:883:1:39:0,-3.32816,-75.8925 0/1:23:14,9:14:546:9:329:-23.0281,0,-42.5627 0/1:20:10,10:10:383:10:385:-28.9857,0,-28.8036 0/1:29:26,3:26:985:3:117:-2.18051,0,-80.2317 0/0:19:19,0:19:735:0:0:0,-5.71957,-66.4809 dDocent_Contig_2420 18 . A G 7077.3 . AB=0.208811;ABP=1223.37;AC=6;AF=0.5;AN=12;AO=346;CIGAR=1X;DP=1657;DPB=1657;DPRA=0;EPP=754.34;EPPR=2849.81;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996186;PAO=0;PQA=0;PQR=0;PRO=0;QA=13519;QR=51804;RO=1311;RPL=0;RPP=754.34;RPPR=2849.81;RPR=346;RUN=1;SAF=346;SAP=754.34;SAR=0;SRF=1311;SRP=2849.81;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:234:191,43:191:7558:43:1675:-80.5452,0,-609.417 0/1:274:218,56:218:8610:56:2230:-118.388,0,-691.96 0/1:300:246,54:246:9755:54:2119:-100.593,0,-787.055 0/1:228:198,30:198:7801:30:1169:-36.8563,0,-633.088 0/1:288:226,62:226:8884:62:2395:-129.01,0,-712.399 0/1:333:232,101:232:9196:101:3931:-253.559,0,-726.866 dDocent_Contig_2422 22 . T A 155.129 . AB=0.107692;ABP=263.687;AC=1;AF=0.0833333;AN=12;AO=35;CIGAR=1X;DP=1705;DPB=1705;DPRA=0.996491;EPP=79.0118;EPPR=3625.03;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998201;PAO=0;PQA=0;PQR=0;PRO=0;QA=1348;QR=64486;RO=1668;RPL=0;RPP=79.0118;RPPR=3625.03;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=1668;SRP=3625.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:237:232,4:232:9020:4:153:0,-57.3059,-797.25 0/0:280:277,3:277:10591:3:123:0,-72.8236,-941.205 0/0:305:300,5:300:11655:5:182:0,-75.0891,-1031.59 0/1:195:173,21:173:6673:21:839:-17.0358,0,-541.585 0/0:403:401,2:401:15553:2:51:0,-116.474,-1393.9 0/0:285:285,0:285:10994:0:0:0,-85.7935,-988.867 dDocent_Contig_2423 209 . N G 243.306 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=253;QR=0;RO=0;RPL=7;RPP=18.2106;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:40:-3.99568,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:121:-11.2802,-0.90309,0 1/1:3:0,3:0:0:3:92:-8.57652,-0.90309,0 dDocent_Contig_2424 13 . G C 14173.6 . AB=0.765408;ABP=310.768;AC=7;AF=0.583333;AN=12;AO=440;CIGAR=1X;DP=558;DPB=558;DPRA=0;EPP=958.458;EPPR=259.244;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=17527;QR=4677;RO=118;RPL=0;RPP=958.458;RPPR=259.244;RPR=440;RUN=1;SAF=440;SAP=958.458;SAR=0;SRF=118;SRP=259.244;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:73:17,56:17:686:56:2231:-178.98,0,-40.0941 0/1:106:21,85:21:828:85:3375:-271.891,0,-42.9228 0/1:115:44,71:44:1739:71:2809:-218.304,0,-122.11 0/1:109:14,95:14:548:95:3810:-310.084,0,-16.8433 0/1:100:22,78:22:876:78:3095:-248.526,0,-49.0437 1/1:55:0,55:0:0:55:2207:-198.799,-16.5567,0 dDocent_Contig_2425 82 . A G 666.448 . AB=0.201031;ABP=153.625;AC=2;AF=0.166667;AN=12;AO=39;CIGAR=1M2D1M1X;DP=598;DPB=582;DPRA=0.960396;EPP=87.6977;EPPR=1212.52;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.820513;PAIREDR=0.822262;PAO=0;PQA=0;PQR=0;PRO=0;QA=1416;QR=19746;RO=557;RPL=39;RPP=87.6977;RPPR=1212.52;RPR=0;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=557;SRP=1212.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:110:109,0:109:3848:0:0:0,-32.8123,-346.426 0|0:109:109,0:109:3806:0:0:0,-32.8123,-342.74 0|0:100:100,0:100:3583:0:0:0,-30.103,-322.664 0|0:85:85,0:85:3024:0:0:0,-25.5875,-272.382 0|1:109:89,19:89:3191:19:694:-30.1472,0,-254.769 0|1:85:65,20:65:2294:20:722:-39.7194,0,-181.119 dDocent_Contig_2426 9 . T A 50131 . AB=0.4399;ABP=91.2314;AC=12;AF=1;AN=12;AO=1237;CIGAR=1X3M1X1M2X3M1X;DP=2812;DPB=2816.33;DPRA=0;EPP=2689.12;EPPR=1216.86;GTI=0;LEN=1;MEANALT=9.16667;MQM=59.9636;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.991916;PAIREDR=0.989267;PAO=0;PQA=0;PQR=493;PRO=13;QA=48541;QR=21802;RO=559;RPL=0;RPP=2689.12;RPPR=1216.86;RPR=1237;RUN=1;SAF=1237;SAP=2689.12;SAR=0;SRF=559;SRP=1216.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:441:108,127,197:108:4212:127,197:4984,7690:-663.293,-285.907,-593.889,-63.6854,0,-350.595 1|1:576:129,172,262:129:5054:172,262:6698,10328:-945.738,-434.095,-797.912,-134.881,0,-471.607 1|1:217:47,73,88:47:1846:73,88:2844,3487:-354.543,-135.182,-265.037,-81.6791,0,-207.021 1|1:411:101,129,166:101:3925:129,166:5085,6486:-598.66,-210.7,-494.383,-95.8514,0,-368.395 1|1:632:83,227,299:83:3235:227,299:8893,11757:-1407.47,-701.191,-898.749,-465.376,0,-641.26 1|1:535:91,202,225:91:3530:202,225:7896,8793:-1054.62,-432.863,-662.076,-359.128,0,-581.417 dDocent_Contig_2427 13 . A T 1690.51 . AB=0.185263;ABP=411.709;AC=2;AF=0.166667;AN=12;AO=108;CIGAR=1X;DP=1575;DPB=1575;DPRA=0.809615;EPP=237.529;EPPR=3184.22;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4301;QR=58111;RO=1465;RPL=0;RPP=237.529;RPPR=3184.22;RPR=108;RUN=1;SAF=108;SAP=237.529;SAR=0;SRF=1465;SRP=3184.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:219:155,64:155:6107:64:2540:-162.806,0,-483.488 0/0:312:311,0:311:12368:0:0:0,-93.6203,-1111.85 0/0:238:228,10:228:9061:10:404:0,-34.9251,-778.237 0/1:256:231,24:231:9149:24:959:-9.46707,0,-745.732 0/0:286:283,3:283:11230:3:120:0,-74.9073,-998.762 0/0:264:257,7:257:10196:7:278:0,-54.0837,-891.611 dDocent_Contig_2428 19 . C T 6936.94 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=4;CIGAR=1X3M1X3M1X;DP=269;DPB=269;DPRA=1.7619;EPP=11.6962;EPPR=105.07;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=160;QR=1877;RO=47;RPL=0;RPP=11.6962;RPPR=105.07;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=47;SRP=105.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:40:11,0,29,0:11:443:0,29,0:0,1142,0:-91.0335,-94.3448,-130.86,0,-36.9149,-28.1851,-94.3448,-130.86,-36.9149,-130.86 0|0:29:16,0,13,0:16:637:0,13,0:0,503,0:-36.8863,-41.7027,-94.162,0,-52.8508,-48.9374,-41.7027,-94.162,-52.8508,-94.162 0|0:38:13,0,25,0:13:516:0,25,0:0,958,0:-75.0873,-79.0007,-121.482,0,-42.8736,-35.3478,-79.0007,-121.482,-42.8736,-121.482 0|0:46:7,0,39,0:7:281:0,39,0:0,1528,0:-123.93,-126.037,-149.193,0,-23.5555,-11.8154,-126.037,-149.193,-23.5555,-149.193 0|0:42:0,0,42,0:0:0:0,42,0:0,1623,0:-146.325,-146.325,-146.325,-12.6433,-12.6433,0,-146.325,-146.325,-12.6433,-146.325 0|0:74:0,4,66,4:0:0:4,66,4:160,2532,162:-227.653,-214.472,-213.268,-19.868,-6.69013,0,-214.294,-201.113,-6.50718,-213.09 dDocent_Contig_2429 119 . C G 37611.3 . AB=0.615497;ABP=161.515;AC=7;AF=0.583333;AN=12;AO=1350;CIGAR=1X;DP=1912;DPB=1912;DPRA=0;EPP=2934.5;EPPR=1221.21;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997037;PAIREDR=0.998217;PAO=0;PQA=0;PQR=0;PRO=0;QA=47713;QR=19675;RO=561;RPL=0;RPP=2934.5;RPPR=1221.21;RPR=1350;RUN=1;SAF=0;SAP=2934.5;SAR=1350;SRF=0;SRP=1221.21;SRR=561;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:188:94,94:94:3277:94:3343:-244.496,0,-238.561 0/1:78:15,63:15:533:63:2222:-176.768,0,-24.8232 0/1:161:101,60:101:3545:60:2106:-141.342,0,-270.798 0/1:207:138,69:138:4815:69:2437:-157.274,0,-371.196 1/1:544:36,508:36:1246:508:17944:-1502.15,-51.322,0 0/1:734:177,556:177:6259:556:19661:-1548.33,0,-342.689 dDocent_Contig_2430 50 . G A 134.213 . AB=0.2;ABP=30.3709;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=2X;DP=188;DPB=188;DPRA=1.14379;EPP=18.2106;EPPR=391.704;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=279;QR=7055;RO=179;RPL=7;RPP=18.2106;RPPR=391.704;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=179;SRP=391.704;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:35:34,0:34:1341:0:0:0,-10.235,-120.547 0|1:35:28,7:28:1077:7:279:-14.9442,0,-86.6845 0|0:13:13,0:13:519:0:0:0,-3.91339,-47.0574 0|0:11:11,0:11:438:0:0:0,-3.31133,-39.7755 0|0:33:33,0:33:1272:0:0:0,-9.93399,-114.747 0|0:61:60,0:60:2408:0:0:0,-18.0618,-216.787 dDocent_Contig_2431 107 . N A 14312.7 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=470;CIGAR=1X;DP=470;DPB=470;DPRA=0;EPP=905.622;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.93617;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=15877;QR=0;RO=0;RPL=0;RPP=1023.6;RPPR=0;RPR=470;RUN=1;SAF=14;SAP=905.622;SAR=456;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:44:0,44:0:0:44:1524:-137.454,-13.2453,0 1/1:31:0,31:0:0:31:1040:-93.9027,-9.33193,0 1/1:17:0,17:0:0:17:535:-48.4479,-5.11751,0 1/1:50:0,50:0:0:50:1664:-150.038,-15.0515,0 1/1:217:0,217:0:0:217:7369:-663.315,-65.3235,0 1/1:111:0,111:0:0:111:3745:-337.271,-33.4143,0 dDocent_Contig_2432 99 . N T 1220.36 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=36;CIGAR=2X6I4X;DP=37;DPB=74;DPRA=0;EPP=81.1833;EPPR=0;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0.361111;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1338;QR=0;RO=0;RPL=36;RPP=81.1833;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=81.1833;SAR=36;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:22:0,21:0:0:21:779:-70.0663,-6.32163,0 1|1:10:0,10:0:0:10:375:-34.1024,-3.0103,0 1|1:4:0,4:0:0:4:150:-13.8659,-1.20412,0 1|1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_2433 76 . A G 16692.9 . AB=0.309876;ABP=788.249;AC=6;AF=0.5;AN=12;AO=775;CIGAR=1X;DP=2501;DPB=2501;DPRA=0;EPP=1685.9;EPPR=3744.46;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=27028;QR=61821;RO=1723;RPL=775;RPP=1685.9;RPPR=3744.46;RPR=0;RUN=1;SAF=775;SAP=1685.9;SAR=0;SRF=1723;SRP=3744.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:456:317,138:317:11271:138:4798:-294.666,0,-876.915 0/1:404:263,141:263:9405:141:4924:-321.702,0,-724.758 0/1:259:197,62:197:7150:62:2160:-116.699,0,-565.542 0/1:286:213,72:213:7616:72:2482:-137.466,0,-599.269 0/1:606:432,173:432:15558:173:6016:-359.071,0,-1217.35 0/1:490:301,189:301:10821:189:6648:-450.907,0,-826.228 dDocent_Contig_2434 43 . A G 448.382 . AB=0.168539;ABP=172.873;AC=3;AF=0.25;AN=12;AO=35;CIGAR=1X;DP=405;DPB=405;DPRA=0.765625;EPP=79.0118;EPPR=806.455;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1301;QR=14389;RO=370;RPL=0;RPP=79.0118;RPPR=806.455;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=370;SRP=806.455;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:47:35,12:35:1349:12:425:-24.4219,0,-107.514 0/1:70:59,11:59:2271:11:438:-18.7026,0,-183.502 0/0:67:62,5:62:2415:5:161:0,-5.37149,-202.713 0/1:61:54,7:54:2088:7:277:-6.9355,0,-169.753 0/0:81:81,0:81:3155:0:0:0,-24.3834,-284.053 0/0:79:79,0:79:3111:0:0:0,-23.7814,-280.09 dDocent_Contig_2435 1 . N G 77.8076 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_2436 12 . A G 8063.06 . AB=0.139013;ABP=760.231;AC=0;AF=0;AN=12;AO=93;CIGAR=2X4M;DP=669;DPB=669;DPRA=0;EPP=204.957;EPPR=311.359;GTI=0;LEN=1;MEANALT=5;MQM=59.9032;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3671;QR=5580;RO=142;RPL=0;RPP=204.957;RPPR=311.359;RPR=93;RUN=1;SAF=93;SAP=204.957;SAR=0;SRF=142;SRP=311.359;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:79:12,3,15,12,35:12:481:3,15,12,35:117,579,481,1363:-116.292,-110.286,-149.015,-72.3591,-102.373,-107.475,-80.2721,-110.286,-72.3591,-116.292,-7.9098,-37.9244,0,-7.9098,-37.0056 0|0:118:24,10,19,12,53:24:944:10,19,12,53:393,732,467,2107:-166.236,-141.135,-215.774,-113.361,-158.685,-185.291,-135.085,-180.408,-152.635,-209.121,0,-45.325,-17.5522,-39.2749,-61.6967 0|0:92:17,15,16,7,36:17:665:15,16,7,36:578,633,278,1464:-115.649,-73.3122,-123.468,-68.671,-75.888,-118.526,-97.8807,-105.098,-100.457,-150.445,0,-7.21802,-2.57538,-31.7868,-43.8365 0|0:91:27,5,15,12,32:27:1074:5,15,12,32:194,589,479,1285:-97.7586,-89.9484,-176.869,-57.444,-129.932,-141.354,-66.4373,-138.925,-106.421,-151.251,0,-72.4897,-39.985,-48.9782,-78.7949 0|0:193:38,2,48,34,63:38:1471:2,48,34,63:72,1875,1325,2530:-230.353,-235.918,-356.134,-87.6563,-202.6,-194.024,-132.898,-247.841,-99.579,-243.48,-33.3196,-148.265,0,-45.2424,-135.173 0|0:96:24,12,9,16,31:24:945:12,9,16,31:472,353,641,1199:-91.2398,-59.6375,-133.762,-69.4338,-108.343,-144.461,-45.6859,-84.596,-94.3924,-118.607,0,-38.9088,-48.7049,-24.9572,-68.4032 dDocent_Contig_2437 62 . A T 458.257 . AB=0.173653;ABP=157.497;AC=3;AF=0.25;AN=12;AO=37;CIGAR=1M1D2X;DP=371;DPB=361.25;DPRA=2.11875;EPP=83.3548;EPPR=717.425;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99696;PAO=0;PQA=0;PQR=0;PRO=0;QA=1412;QR=12923;RO=329;RPL=37;RPP=83.3548;RPPR=717.425;RPR=0;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=329;SRP=717.425;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:76:73,3:73:2848:3:113:0,-12.3414,-245.926 0|0:96:89,5:89:3475:5:187:0,-11.3283,-295.693 0|1:68:50,17:50:1966:17:663:-39.4196,0,-156.578 0|1:62:55,7:55:2183:7:276:-6.54497,0,-177.995 0|0:32:32,0:32:1272:0:0:0,-9.63296,-114.753 0|1:37:30,5:30:1179:5:173:-5.08284,0,-95.6 dDocent_Contig_2438 32 . A T 185.003 . AB=0.444444;ABP=3.49285;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=2X;DP=245;DPB=245;DPRA=0.666667;EPP=33.4109;EPPR=504.62;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=474;QR=9059;RO=231;RPL=0;RPP=33.4109;RPPR=504.62;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=231;SRP=504.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:22:22,0:22:859:0:0:0,-6.62266,-77.6224 0|0:56:52,4:52:2037:4:151:0,-2.90001,-169.58 0|1:18:10,8:10:399:8:279:-20.0231,0,-30.8511 0|0:24:22,2:22:854:2:44:0,-3.04602,-72.9985 0|0:59:59,0:59:2305:0:0:0,-17.7608,-207.636 0|0:66:66,0:66:2605:0:0:0,-19.868,-234.594 dDocent_Contig_2439 29 . T A 184.834 . AB=0.0917431;ABP=1107.61;AC=1;AF=0.0833333;AN=12;AO=81;CIGAR=2M1X;DP=3706;DPB=3794.33;DPRA=1.27223;EPP=178.9;EPPR=7779.05;GTI=0;LEN=1;MEANALT=3.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3198;QR=141099;RO=3581;RPL=0;RPP=178.9;RPPR=7779.05;RPR=81;RUN=1;SAF=81;SAP=178.9;SAR=0;SRF=3581;SRP=7779.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:620:618,0,0:618:24256:0,0:0,0:0,-186.037,-2180.91,-186.037,-2180.91,-2180.91 0|0:799:785,10,1:785:30910:10,1:359,27:0,-206.932,-2746.74,-234.183,-2747.62,-2776.6 0|0:405:381,21,0:381:15052:21,0:746,0:0,-53.8954,-1286.16,-114.692,-1292.48,-1353.24 0|0:606:605,1,0:605:23932:1,0:32,0:0,-179.225,-2148.74,-182.123,-2149.04,-2151.62 0|1:763:692,0,70:692:27217:0,70:0,2774:-20.0062,-228.319,-2466.92,0,-2238.61,-2217.53 0|0:513:500,0,10:500:19732:0,10:0,397:0,-150.515,-1773.99,-117.766,-1741.31,-1738.3 dDocent_Contig_2440 98 . N G 111.555 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=110;QR=0;RO=0;RPL=8;RPP=20.3821;RPPR=0;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:5:0,5:0:0:5:61:-5.61194,-1.50515,0 ./.:.:.:.:.:.:.:. dDocent_Contig_2441 14 . C A 2452.47 . AB=0.121846;ABP=2317.01;AC=3;AF=0.25;AN=12;AO=328;CIGAR=1X;DP=4846;DPB=4846;DPRA=0;EPP=715.253;EPPR=9811.55;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=1;PAIREDR=0.999557;PAO=0;PQA=0;PQR=0;PRO=0;QA=13045;QR=181127;RO=4517;RPL=0;RPP=715.253;RPPR=9811.55;RPR=328;RUN=1;SAF=328;SAP=715.253;SAR=0;SRF=4517;SRP=9811.55;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:614:528,86:528:21182:86:3392:-120.503,0,-1719.67 0/0:722:691,31:691:27700:31:1233:0,-106.1,-2379.2 0/1:523:478,44:478:19160:44:1779:-2.99643,0,-1565.42 0/1:726:629,97:629:25302:97:3839:-126.962,0,-2056.29 0/0:1297:1272,25:1272:50936:25:999:0,-300.234,-4489.01 0/0:964:919,45:919:36847:45:1803:0,-127.718,-3150.21 dDocent_Contig_2442 56 . A G 150348 . AB=0.85164;ABP=3376.49;AC=8;AF=0.666667;AN=12;AO=4572;CIGAR=1X;DP=5062;DPB=5062;DPRA=0;EPP=9930.98;EPPR=1062.69;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999781;PAIREDR=0.997951;PAO=0;PQA=0;PQR=0;PRO=0;QA=178753;QR=19206;RO=488;RPL=4572;RPP=9930.98;RPPR=1062.69;RPR=0;RUN=1;SAF=4572;SAP=9930.98;SAR=0;SRF=488;SRP=1062.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:787:130,657:130:5094:657:25536:-2059.31,0,-221.443 0/1:939:116,823:116:4578:823:32146:-2607.76,0,-129.289 0/1:644:81,562:81:3202:562:21992:-1783.95,0,-94.611 0/1:771:137,633:137:5389:633:24777:-1995.74,0,-252.656 1/1:1029:14,1015:14:543:1015:39685:-3519.06,-260.548,0 1/1:892:10,882:10:400:882:34617:-3076.21,-232.16,0 dDocent_Contig_2443 35 . A C 897.374 . AB=0.153247;ABP=405.094;AC=4;AF=0.333333;AN=12;AO=59;CIGAR=1X;DP=623;DPB=623;DPRA=0.808824;EPP=131.127;EPPR=1227.72;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.983051;PAIREDR=0.989362;PAO=0;PQA=0;PQR=0;PRO=0;QA=2350;QR=22327;RO=564;RPL=0;RPP=131.127;RPPR=1227.72;RPR=59;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=564;SRP=1227.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:74:61,13:61:2434:13:524:-25.2308,0,-196.929 0/1:103:88,15:88:3463:15:591:-22.5211,0,-280.712 0/1:83:73,10:73:2873:10:402:-11.5528,0,-233.687 0/1:125:104,21:104:4120:21:833:-37.6545,0,-333.162 0/0:119:119,0:119:4746:0:0:0,-35.8226,-427.056 0/0:119:119,0:119:4691:0:0:0,-35.8226,-422.115 dDocent_Contig_2444 7 . A T 8617.34 . AB=0.242221;ABP=949.005;AC=6;AF=0.5;AN=12;AO=397;CIGAR=1X;DP=1639;DPB=1639;DPRA=0;EPP=865.085;EPPR=2695.64;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.962217;PAIREDR=0.980645;PAO=0;PQA=0;PQR=0;PRO=0;QA=15166;QR=47620;RO=1240;RPL=0;RPP=865.085;RPPR=2695.64;RPR=397;RUN=1;SAF=397;SAP=865.085;SAR=0;SRF=1240;SRP=2695.64;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:218:190,27:190:7293:27:1034:-27.8165,0,-590.676 0/1:257:225,32:225:8618:32:1243:-34.7974,0,-698.017 0/1:180:156,23:156:6014:23:877:-25.1955,0,-487.148 0/1:252:214,38:214:8232:38:1446:-54.5538,0,-664.797 0/1:379:276,103:276:10575:103:3945:-241.053,0,-837.269 0/1:353:179,174:179:6888:174:6621:-489.54,0,-513.531 dDocent_Contig_2445 25 . C A 13127.9 . AB=0.389163;ABP=132.978;AC=6;AF=0.5;AN=12;AO=474;CIGAR=1X;DP=1218;DPB=1218;DPRA=0;EPP=1032.29;EPPR=1618.59;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.966245;PAIREDR=0.995968;PAO=0;PQA=0;PQR=0;PRO=0;QA=18779;QR=29361;RO=744;RPL=0;RPP=1032.29;RPPR=1618.59;RPR=474;RUN=1;SAF=474;SAP=1032.29;SAR=0;SRF=744;SRP=1618.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:95:16,79:16:631:79:3128:-253.014,0,-28.5263 0/1:129:54,75:54:2142:75:2980:-229.472,0,-154.133 0/1:127:29,98:29:1147:98:3893:-312.15,0,-65.2834 0/1:127:37,90:37:1410:90:3547:-281.054,0,-88.9243 0/1:345:280,65:280:11050:65:2580:-128.495,0,-889.964 0/1:395:328,67:328:12981:67:2651:-119.826,0,-1048.51 dDocent_Contig_2446 48 . C T 942.564 . AB=0.288889;ABP=55.2704;AC=4;AF=0.333333;AN=12;AO=41;CIGAR=1X;DP=286;DPB=286;DPRA=0.605634;EPP=92.0407;EPPR=535.021;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.979592;PAO=0;PQA=0;PQR=0;PRO=0;QA=1639;QR=9820;RO=245;RPL=0;RPP=92.0407;RPPR=535.021;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=245;SRP=535.021;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:13,3:13:528:3:123:-6.64831,0,-43.0502 0/1:42:34,8:34:1358:8:321:-16.6146,0,-109.835 0/1:49:32,17:32:1282:17:679:-46.6913,0,-100.892 0/1:28:17,11:17:695:11:440:-31.524,0,-54.4481 0/0:80:78,2:78:3115:2:76:0,-16.8681,-273.198 0/0:71:71,0:71:2842:0:0:0,-21.3731,-255.882 dDocent_Contig_2447 30 . G A 45.3844 . AB=0.1;ABP=128.087;AC=1;AF=0.0833333;AN=12;AO=28;CIGAR=1X;DP=800;DPB=800;DPRA=0.703955;EPP=63.8115;EPPR=1679.39;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1108;QR=30635;RO=772;RPL=0;RPP=63.8115;RPPR=1679.39;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=772;SRP=1679.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:90:81,9:81:3232:9:361:-5.76028,0,-263.858 0/0:131:122,9:122:4799:9:356:0,-7.03612,-399.425 0/0:96:92,4:92:3647:4:155:0,-14.5754,-313.935 0/0:101:96,5:96:3818:5:195:0,-12.4807,-325.712 0/0:205:204,1:204:8114:1:41:0,-57.6166,-725.736 0/0:177:177,0:177:7025:0:0:0,-53.2823,-631.953 dDocent_Contig_2448 22 . A T 6141.82 . AB=0.167304;ABP=2014.28;AC=2;AF=0.166667;AN=12;AO=409;CIGAR=1X;DP=5102;DPB=5102;DPRA=0;EPP=891.143;EPPR=10191.6;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997555;PAIREDR=0.998082;PAO=0;PQA=0;PQR=0;PRO=0;QA=16210;QR=186507;RO=4692;RPL=0;RPP=891.143;RPPR=10191.6;RPR=409;RUN=1;SAF=409;SAP=891.143;SAR=0;SRF=4692;SRP=10191.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:747:728,19:728:28947:19:755:0,-156.595,-2534.43 0/0:896:883,13:883:35115:13:506:0,-223.844,-3111.3 0/0:565:556,9:556:22201:9:363:0,-137.047,-1963.16 0/0:802:784,18:784:31167:18:721:0,-176.21,-2737.05 0/1:1041:831,210:831:32932:210:8286:-431.928,0,-2647.62 0/1:1051:910,140:910:36145:140:5579:-185.476,0,-2933.28 dDocent_Contig_2449 44 . A T 220.124 . AB=0.138211;ABP=142.85;AC=3;AF=0.25;AN=12;AO=20;CIGAR=1X;DP=214;DPB=214;DPRA=1.7766;EPP=46.4397;EPPR=424.276;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.55;PAIREDR=0.762887;PAO=0;PQA=0;PQR=0;PRO=0;QA=802;QR=7668;RO=194;RPL=0;RPP=46.4397;RPPR=424.276;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=194;SRP=424.276;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:21,9:21:841:9:354:-23.1883,0,-66.9712 0/0:44:41,3:41:1640:3:122:0,-1.87283,-136.454 0/1:49:45,4:45:1746:4:163:-0.307958,0,-142.613 0/1:44:40,4:40:1569:4:163:-1.81311,0,-128.206 0/0:28:28,0:28:1130:0:0:0,-8.42884,-101.981 0/0:19:19,0:19:742:0:0:0,-5.71957,-67.0981 dDocent_Contig_2450 1 . N G 77.8076 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_2451 98 . N A 195.178 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=197;QR=0;RO=0;RPL=7;RPP=18.2106;RPPR=0;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:55:-5.22366,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 1/1:3:0,3:0:0:3:76:-7.09226,-0.90309,0 dDocent_Contig_2452 1 . N G 298.455 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=54.625;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=323;QR=0;RO=0;RPL=0;RPP=20.3821;RPPR=0;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:163:-14.7604,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:160:-14.7838,-1.20412,0 dDocent_Contig_2459 16 . C T 175.862 . AB=0.25;ABP=20.3821;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=221;DPB=221;DPRA=1.22628;EPP=24.725;EPPR=459.02;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.609524;PAO=0;PQA=0;PQR=0;PRO=0;QA=385;QR=8353;RO=210;RPL=0;RPP=24.725;RPPR=459.02;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=210;SRP=459.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:24,8:24:958:8:312:-18.808,0,-76.8885 0/0:31:31,0:31:1244:0:0:0,-9.33193,-112.23 0/0:32:32,0:32:1281:0:0:0,-9.63296,-115.552 0/0:52:50,2:50:1987:2:73:0,-8.72437,-172.096 0/0:22:21,0:21:840:0:0:0,-6.32163,-75.5045 0/0:52:52,0:52:2043:0:0:0,-15.6536,-184.061 dDocent_Contig_2460 32 . G A 120.772 . AB=0.127119;ABP=145.518;AC=4;AF=0.333333;AN=12;AO=16;CIGAR=1X;DP=168;DPB=168;DPRA=1.144;EPP=37.7539;EPPR=333.074;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.625;PAIREDR=0.756579;PAO=0;PQA=0;PQR=0;PRO=0;QA=629;QR=6125;RO=152;RPL=0;RPP=37.7539;RPPR=333.074;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=152;SRP=333.074;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:18,5:18:720:5:191:-10.6319,0,-58.2016 0/1:49:44,5:44:1788:5:197:-3.35274,0,-146.375 0/1:20:18,2:18:720:2:82:-1.75908,0,-59.1013 0/0:25:24,1:24:956:1:40:0,-3.53007,-82.3455 0/0:25:25,0:25:1011:0:0:0,-7.52575,-91.2822 0/1:26:23,3:23:930:3:119:-3.26823,0,-76.1747 dDocent_Contig_2461 24 . A G 8312.42 . AB=0.375155;ABP=111.991;AC=6;AF=0.5;AN=12;AO=302;CIGAR=1X3M;DP=805;DPB=805;DPRA=0;EPP=658.795;EPPR=1056.17;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11998;QR=19074;RO=485;RPL=0;RPP=658.795;RPPR=1056.17;RPR=302;RUN=1;SAF=302;SAP=658.795;SAR=0;SRF=485;SRP=1056.17;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:83:54,0,25:54:2141:0,25:0,972:-63.5883,-79.8439,-256.078,0,-176.221,-168.695 0|1:136:75,9,52:75:2908:9,52:347,2036:-144.816,-138.901,-375.07,0,-210.389,-223.228 0|1:140:74,3,63:74:2908:3,63:121,2510:-184.392,-196.694,-434.953,0,-229.18,-220.19 0|1:138:82,2,54:82:3246:2,54:80,2167:-153.863,-171.957,-438.496,0,-260.55,-250.884 0|1:201:110,0,91:110:4333:0,91:0,3633:-266.483,-299.596,-656.048,0,-356.848,-329.454 0|1:107:90,0,17:90:3538:0,17:0,680:-29.3209,-56.4136,-347.401,0,-291.386,-286.268 dDocent_Contig_2462 20 . C G 101.065 . AB=0.159091;ABP=47.4268;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=196;DPB=196;DPRA=1.37931;EPP=20.3821;EPPR=409.076;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.919786;PAO=0;PQA=0;PQR=0;PRO=0;QA=313;QR=7478;RO=187;RPL=0;RPP=20.3821;RPPR=409.076;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=187;SRP=409.076;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:648:0:0:0,-4.81648,-58.6537 0/0:29:29,0:29:1168:0:0:0,-8.72987,-105.399 0/0:36:36,0:36:1452:0:0:0,-10.8371,-130.927 0/0:35:35,0:35:1378:0:0:0,-10.536,-124.264 0/1:44:36,7:36:1445:7:272:-11.6294,0,-117.094 0/0:36:35,1:35:1387:1:41:0,-6.74251,-120.983 dDocent_Contig_2463 39 . G A 305.11 . AB=0.114286;ABP=410.068;AC=3;AF=0.25;AN=12;AO=39;CIGAR=1X;DP=783;DPB=783;DPRA=0.735016;EPP=87.6977;EPPR=1618.59;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99328;PAO=0;PQA=0;PQR=0;PRO=0;QA=1562;QR=29559;RO=744;RPL=0;RPP=87.6977;RPPR=1618.59;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=744;SRP=1618.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:96:87,9:87:3495:9:353:-3.22653,0,-285.684 0/1:139:126,13:126:4988:13:526:-5.84383,0,-406.958 0/1:80:66,14:66:2630:14:560:-26.6582,0,-212.744 0/0:151:148,3:148:5855:3:123:0,-33.9907,-515.271 0/0:151:151,0:151:6014:0:0:0,-45.4555,-541.028 0/0:166:166,0:166:6577:0:0:0,-49.971,-591.653 dDocent_Contig_2464 51 . G A 164711 . AB=0.0615791;ABP=7594.41;AC=2;AF=0.166667;AN=12;AO=280;CIGAR=2X1M;DP=5704;DPB=5704;DPRA=0.785998;EPP=611.023;EPPR=647.938;GTI=0;LEN=1;MEANALT=4.8;MQM=51.2179;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.996429;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10940;QR=11442;RO=297;RPL=280;RPP=611.023;RPPR=647.938;RPR=0;RUN=1;SAF=280;SAP=611.023;SAR=0;SRF=297;SRP=647.938;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:862:11,79,25,737:11:412:79,25,737:3115,981,29269:-2627.53,-2374.57,-2384.53,-2550.74,-2328.22,-2576.96,-222.533,0,-176.176,-34.4152 1|0:1027:18,71,93,825:18:671:71,93,825:2773,3629,32647:-2921.24,-2698.74,-2732.29,-2631.55,-2458.55,-2658.48,-240.185,-67.1831,0,-46.7622 0|0:684:0,67,29,587:0:0:67,29,587:2659,1135,23468:-2151.43,-1932.56,-1912.39,-2059.11,-1840.24,-2050.38,-218.883,0,-126.562,-42.178 1|0:834:19,63,99,653:19:746:63,99,653:2488,3860,25849:-2373.72,-2174.72,-2217.11,-2065.51,-1922.15,-2097.07,-252.566,-109.2,0,-117.35 0|0:1157:77,1,0,1077:77:2904:1,0,1077:40,0,42674:-3574.41,-3594.29,-3831.95,-3597.58,-3832.26,-3835.55,-86.2065,-320.914,-324.209,0 0|0:1140:172,50,34,883:172:6709:50,34,883:1970,1335,35038:-2831.95,-2721.68,-3258.09,-2774.03,-3163.45,-3315.27,0,-389.414,-441.773,-285.659 dDocent_Contig_2465 13 . G A 312.504 . AB=0.122137;ABP=327.936;AC=2;AF=0.166667;AN=12;AO=54;CIGAR=1X;DP=767;DPB=767;DPRA=1.06777;EPP=120.27;EPPR=1551.27;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.798;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.944444;PAIREDR=0.952314;PAO=0;PQA=0;PQR=0;PRO=0;QA=2139;QR=28441;RO=713;RPL=0;RPP=120.27;RPPR=1551.27;RPR=54;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=713;SRP=1551.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:131:124,7:124:4932:7:283:0,-13.5924,-416.938 0/1:147:126,21:126:5041:21:839:-31.5733,0,-409.306 0/0:150:138,12:138:5501:12:483:0,-1.33381,-449.618 0/1:115:104,11:104:4123:11:413:-2.88971,0,-335.935 0/0:121:121,0:121:4818:0:0:0,-36.4246,-433.521 0/0:103:100,3:100:4026:3:121:0,-19.7259,-351.035 dDocent_Contig_2466 30 . T G 780.744 . AB=0.127619;ABP=635.347;AC=1;AF=0.0833333;AN=12;AO=73;CIGAR=1X;DP=2493;DPB=2493;DPRA=1.2507;EPP=161.528;EPPR=5247.12;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2820;QR=90682;RO=2415;RPL=0;RPP=161.528;RPPR=5247.12;RPR=73;RUN=1;SAF=73;SAP=161.528;SAR=0;SRF=2415;SRP=5247.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:259:258,0:258:9567:0:0:0,-77.6657,-860.328 0/0:453:452,0:452:16838:0:0:0,-136.066,-1514.52 0/0:341:338,3:338:12763:3:89:0,-94.3518,-1139.78 0/0:447:443,2:443:16539:2:51:0,-129.348,-1482.87 0/0:468:466,1:466:17630:1:41:0,-136.896,-1581.63 0/1:525:458,67:458:17345:67:2639:-79.5973,0,-1402.08 dDocent_Contig_2467 16 . T C 10483.7 . AB=0.0794224;ABP=428.595;AC=0;AF=0;AN=12;AO=22;CIGAR=1X2M6I7M;DP=637;DPB=899.7;DPRA=0;EPP=50.7827;EPPR=417.762;GTI=0;LEN=1;MEANALT=3.66667;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=851;QR=7437;RO=191;RPL=0;RPP=50.7827;RPPR=417.762;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=191;SRP=417.762;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:87:27,5,0,52,0:27:1054:5,0,52,0:195,0,1766,0:-135.058,-127.152,-212.307,-143.186,-213.813,-229.844,0,-70.6387,-86.6692,-71.0156,-143.186,-213.813,-229.844,-86.6692,-229.844 0|0:69:14,0,1,54,0:14:549:0,1,54,0:0,37,1918,0:-152.037,-156.251,-201.407,-153.224,-198.38,-198.079,0,-45.1689,-42.1434,-28.9133,-156.251,-201.407,-198.38,-45.1689,-201.407 0|0:201:29,4,0,166,0:29:1137:4,0,166,0:150,0,5952,0:-476.73,-473.174,-565.477,-485.459,-566.682,-578.967,0,-81.3096,-93.5953,-43.6243,-485.459,-566.682,-578.967,-93.5953,-578.967 0|0:72:27,2,0,34,6:27:1039:2,0,34,6:77,0,1251,242:-94.1529,-95.9578,-180.66,-102.281,-181.263,-187.585,0,-78.9853,-85.3076,-75.0726,-82.3275,-161.312,-167.634,-65.3555,-165.828 0|0:114:43,7,10,53,0:43:1669:7,10,53,0:272,384,1802,0:-133.17,-123.76,-258.801,-114.589,-229.387,-248.728,0,-114.792,-105.624,-121.188,-146.114,-260.908,-251.739,-137.143,-283.26 0|0:94:51,0,11,29,0:51:1989:0,11,29,0:0,430,1029,0:-68.4481,-83.8006,-247.304,-48.4394,-211.949,-208.638,0,-163.49,-128.137,-154.76,-83.8006,-247.304,-211.949,-163.49,-247.304 dDocent_Contig_2469 12 . C A 1733.1 . AB=0.151639;ABP=774.595;AC=2;AF=0.166667;AN=12;AO=111;CIGAR=1X;DP=2532;DPB=2532;DPRA=0.813333;EPP=244.044;EPPR=5260.15;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9686;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997109;PAO=0;PQA=0;PQR=0;PRO=0;QA=4406;QR=97302;RO=2421;RPL=0;RPP=244.044;RPPR=5260.15;RPR=111;RUN=1;SAF=111;SAP=244.044;SAR=0;SRF=2421;SRP=5260.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:379:379,0:379:15275:0:0:0,-114.09,-1373.48 0/0:413:413,0:413:16552:0:0:0,-124.325,-1488.32 0/0:497:497,0:497:20000:0:0:0,-149.612,-1797.97 0/0:511:511,0:511:20543:0:0:0,-153.826,-1847.04 0/1:377:319,58:319:12834:58:2319:-95.376,0,-1040.48 0/1:355:302,53:302:12098:53:2087:-81.1563,0,-981.069 dDocent_Contig_2470 11 . T C 184.753 . AB=0.118421;ABP=195.243;AC=1;AF=0.0833333;AN=12;AO=31;CIGAR=1X;DP=894;DPB=894;DPRA=0.924528;EPP=70.3259;EPPR=1876.99;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.989571;PAO=0;PQA=0;PQR=0;PRO=0;QA=1254;QR=34485;RO=863;RPL=0;RPP=70.3259;RPPR=1876.99;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=863;SRP=1876.99;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:159:159,0:159:6347:0:0:0,-47.8638,-570.963 0/0:188:187,1:187:7492:1:41:0,-52.4991,-669.8 0/0:87:84,3:84:3398:3:123:0,-14.7248,-294.386 0/0:154:153,1:153:6124:1:41:0,-42.2641,-546.819 0/0:154:146,8:146:5763:8:322:0,-17.0121,-489.129 0/1:152:134,18:134:5361:18:727:-19.9982,0,-436.56 dDocent_Contig_2471 98 . N T 556.58 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=19;CIGAR=1X;DP=19;DPB=19;DPRA=0;EPP=44.2683;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=17.775;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=615;QR=0;RO=0;RPL=19;RPP=44.2683;RPPR=0;RPR=0;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:19:0,19:0:0:19:615:-55.658,-5.71957,0 ./.:.:.:.:.:.:.:. dDocent_Contig_2472 19 . T C 13998.1 . AB=0.642254;ABP=127.806;AC=6;AF=0.5;AN=12;AO=456;CIGAR=1X;DP=710;DPB=710;DPRA=0;EPP=993.202;EPPR=554.564;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.982456;PAIREDR=0.96063;PAO=0;PQA=0;PQR=0;PRO=0;QA=18047;QR=10111;RO=254;RPL=0;RPP=993.202;RPPR=554.564;RPR=456;RUN=1;SAF=456;SAP=993.202;SAR=0;SRF=254;SRP=554.564;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:88:17,71:17:675:71:2809:-226.425,0,-34.5891 0/1:155:56,99:56:2218:99:3848:-299.672,0,-153.117 0/1:79:26,53:26:1028:53:2136:-168.631,0,-69.027 0/1:130:51,79:51:2031:79:3173:-246.501,0,-143.841 0/1:119:66,53:66:2640:53:2065:-150.224,0,-201.904 0/1:139:38,101:38:1519:101:4016:-319.578,0,-95.1109 dDocent_Contig_2473 14 . T C 165.557 . AB=0.120301;ABP=169.561;AC=1;AF=0.0833333;AN=12;AO=22;CIGAR=1X;DP=419;DPB=419;DPRA=0.975352;EPP=50.7827;EPPR=862.913;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.982323;PAO=0;PQA=0;PQR=0;PRO=0;QA=823;QR=14392;RO=396;RPL=0;RPP=50.7827;RPPR=862.913;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=396;SRP=862.913;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:87:87,0:87:3109:0:0:0,-26.1896,-280 0/0:68:65,3:65:2379:3:122:0,-9.09755,-202.967 0/0:46:45,1:45:1634:1:10:0,-12.8474,-146.328 0/1:133:116,16:116:4210:16:640:-18.0786,0,-339.178 0/0:30:28,2:28:1042:2:51:0,-4.19106,-89.2484 0/0:55:55,0:55:2018:0:0:0,-16.5566,-181.869 dDocent_Contig_2474 32 . G A 2082.44 . AB=0.0438596;ABP=415.057;AC=0;AF=0;AN=12;AO=10;CIGAR=13M2X3M;DP=355;DPB=342.944;DPRA=0;EPP=24.725;EPPR=285.302;GTI=0;LEN=1;MEANALT=9;MQM=60;MQMR=60;NS=6;NUMALT=9;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=371;QR=5017;RO=130;RPL=0;RPP=24.725;RPPR=285.302;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=130;SRP=285.302;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:39:23,4,0,1,7,0,0,1,0,0:23:890:4,0,1,7,0,0,1,0,0:140,0,33,256,0,0,41,0,0:-13.9927,-9.53079,-81.4431,-20.9164,-82.6472,-94.0347,-18.2506,-79.9805,-91.3678,-91.0668,0,-61.7348,-73.1211,-70.4546,-71.0139,-20.9164,-82.6472,-94.0347,-91.3678,-73.1211,-94.0347,-20.9164,-82.6472,-94.0347,-91.3678,-73.1211,-94.0347,-94.0347,-17.5294,-79.2623,-90.6498,-87.9829,-69.7361,-90.6498,-90.6498,-90.3488,-20.9164,-82.6472,-94.0347,-91.3678,-73.1211,-94.0347,-94.0347,-90.6498,-94.0347,-20.9164,-82.6472,-94.0347,-91.3678,-73.1211,-94.0347,-94.0347,-90.6498,-94.0347,-94.0347 0|0:78:34,16,0,6,2,2,4,8,0,1:34:1324:16,0,6,2,2,4,8,0,1:568,0,236,78,79,161,290,0,41:-36.0406,0,-104.02,-46.2756,-108.837,-155.107,-26.856,-89.4215,-135.692,-133.886,-39.8621,-102.425,-148.695,-129.28,-148.093,-39.7726,-102.335,-148.606,-129.19,-142.193,-148.004,-33.0015,-95.5657,-141.836,-122.421,-135.424,-135.335,-140.632,-22.607,-85.1719,-131.442,-112.026,-125.029,-124.94,-118.171,-129.033,-46.2756,-108.837,-155.107,-135.692,-148.695,-148.606,-141.836,-131.442,-155.107,-42.8902,-105.452,-151.723,-132.307,-145.31,-145.221,-138.452,-128.057,-151.723,-151.422 0|0:111:38,25,0,5,13,11,5,1,8,3:38:1485:25,0,5,13,11,5,1,8,3:821,0,190,494,427,202,40,316,122:-54.8701,0,-114.562,-66.3092,-122.088,-188.404,-50.7263,-106.506,-172.821,-171.316,-25.8008,-81.5833,-147.897,-132.315,-143.984,-31.2231,-87.0051,-153.32,-137.737,-112.813,-150.008,-49.6538,-105.434,-171.749,-156.167,-131.243,-136.665,-170.244,-63.0137,-118.792,-185.108,-169.526,-144.602,-150.024,-168.454,-184.807,-40.3058,-96.0868,-162.402,-146.82,-121.895,-127.318,-145.748,-159.107,-159.994,-56.2444,-112.024,-178.34,-162.757,-137.833,-143.255,-161.685,-175.044,-152.338,-177.436 0|0:52:16,1,0,6,12,0,5,0,0,8:16:602:1,0,6,12,0,5,0,0,8:33,0,223,465,0,197,0,0,323:-33.3886,-35.5382,-84.5573,-38.2051,-84.8583,-87.5256,-19.9568,-66.61,-69.2771,-67.471,0,-46.6559,-49.3231,-31.0741,-45.7107,-38.2051,-84.8583,-87.5256,-69.2771,-49.3231,-87.5256,-21.9944,-68.6488,-71.316,-53.0673,-33.1123,-71.316,-69.8109,-38.2051,-84.8583,-87.5256,-69.2771,-49.3231,-87.5256,-71.316,-87.5256,-38.2051,-84.8583,-87.5256,-69.2771,-49.3231,-87.5256,-71.316,-87.5256,-87.5256,-11.5699,-58.2262,-60.8934,-42.6443,-22.6881,-60.8934,-44.6828,-60.8934,-60.8934,-58.4852 0|0:43:12,4,9,2,7,0,0,0,5,0:12:446:4,9,2,7,0,0,0,5,0:109,333,75,243,0,0,0,186,0:-23.6453,-18.6626,-53.9665,0,-27.9237,-33.8097,-21.1108,-49.0255,-30.3726,-57.0194,-7.5038,-35.4226,-16.7669,-37.8717,-41.9103,-27.2577,-55.1707,-36.5189,-57.6215,-44.0175,-63.7668,-27.2577,-55.1707,-36.5189,-57.6215,-44.0175,-63.7668,-63.7668,-27.2577,-55.1707,-36.5189,-57.6215,-44.0175,-63.7668,-63.7668,-63.7668,-12.0302,-39.9481,-21.2931,-42.398,-28.7933,-48.5438,-48.5438,-48.5438,-47.0387,-27.2577,-55.1707,-36.5189,-57.6215,-44.0175,-63.7668,-63.7668,-63.7668,-48.5438,-63.7668 0|0:32:7,0,0,4,19,0,0,0,0,0:7:270:0,0,4,19,0,0,0,0,0:0,0,160,727,0,0,0,0,0:-57.5285,-59.6357,-81.8075,-59.6357,-81.8075,-81.8075,-46.453,-68.6254,-68.6254,-67.4213,0,-22.1628,-22.1628,-8.97978,-16.4432,-59.6357,-81.8075,-81.8075,-68.6254,-22.1628,-81.8075,-59.6357,-81.8075,-81.8075,-68.6254,-22.1628,-81.8075,-81.8075,-59.6357,-81.8075,-81.8075,-68.6254,-22.1628,-81.8075,-81.8075,-81.8075,-59.6357,-81.8075,-81.8075,-68.6254,-22.1628,-81.8075,-81.8075,-81.8075,-81.8075,-59.6357,-81.8075,-81.8075,-68.6254,-22.1628,-81.8075,-81.8075,-81.8075,-81.8075,-81.8075 dDocent_Contig_2475 21 . G A 261.889 . AB=0.161905;ABP=107.262;AC=2;AF=0.166667;AN=12;AO=26;CIGAR=1X1M2I1X;DP=302;DPB=319.333;DPRA=1.93548;EPP=59.4686;EPPR=600.165;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1025;QR=10583;RO=275;RPL=0;RPP=59.4686;RPPR=600.165;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=275;SRP=600.165;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:35:29,6:29:1113:6:232:-10.7122,0,-89.9314 0|0:81:76,5:76:2923:5:197:0,-6.2774,-245.114 0|0:54:50,4:50:1917:4:160:0,-1.47182,-157.982 0|1:70:58,11:58:2229:11:436:-18.6985,0,-179.939 0|0:50:50,0:50:1933:0:0:0,-15.0515,-174.196 0|0:12:12,0:12:468:0:0:0,-3.61236,-42.4705 dDocent_Contig_2476 47 . A T 63391.4 . AB=0.469872;ABP=39.2546;AC=6;AF=0.5;AN=12;AO=2160;CIGAR=1X;DP=4597;DPB=4597;DPRA=0;EPP=4693.39;EPPR=5292.72;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999589;PAO=0;PQA=0;PQR=0;PRO=0;QA=86006;QR=95478;RO=2436;RPL=0;RPP=4693.39;RPPR=5292.72;RPR=2160;RUN=1;SAF=2160;SAP=4693.39;SAR=0;SRF=2436;SRP=5292.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:670:291,378:291:11411:378:15078:-1154.29,0,-824.721 0/1:864:297,567:297:11612:567:22505:-1763.46,0,-784.268 0/1:526:221,305:221:8724:305:12146:-933.945,0,-626.353 0/1:768:249,519:249:9684:519:20720:-1631.88,0,-639.881 0/1:864:642,222:642:25262:222:8851:-535.984,0,-2011.47 0/1:905:736,169:736:28785:169:6706:-330.807,0,-2315.91 dDocent_Contig_2477 10 . A G 5063.18 . AB=0.498525;ABP=3.01671;AC=6;AF=0.5;AN=12;AO=169;CIGAR=1X2M;DP=339;DPB=339;DPRA=0;EPP=369.989;EPPR=280.959;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.615385;PAIREDR=0.804688;PAO=0;PQA=0;PQR=0;PRO=0;QA=6752;QR=4986;RO=128;RPL=0;RPP=369.989;RPPR=280.959;RPR=169;RUN=1;SAF=169;SAP=369.989;SAR=0;SRF=128;SRP=280.959;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:38:16,6,16:16:626:6,16:242,649:-48.7064,-33.5752,-83.2336,0,-31.5114,-46.6465 0|1:85:28,10,47:28:1085:10,47:401,1861:-144.717,-120.108,-206.22,0,-56.0751,-74.9677 0|1:56:17,8,31:17:664:8,31:321,1248:-97.7384,-76.4071,-128.579,0,-28.1248,-45.2454 0|1:68:23,3,42:23:904:3,42:121,1680:-131.444,-128.393,-201.844,0,-64.3722,-61.7042 0|1:51:20,13,18:20:767:13,18:522,729:-54.092,-17.1004,-76.1208,0,-19.9135,-57.5156 0|1:41:24,2,15:24:940:2,15:81,585:-40.8418,-41.3856,-118.078,0,-70.6009,-72.7656 dDocent_Contig_2478 108 . A C 496.162 . AB=0.144304;ABP=437.09;AC=3;AF=0.25;AN=12;AO=64;CIGAR=1X;DP=696;DPB=696;DPRA=0;EPP=141.985;EPPR=1375.38;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.969937;PAO=0;PQA=0;PQR=0;PRO=0;QA=2138;QR=21504;RO=632;RPL=0;RPP=141.985;RPPR=1375.38;RPR=64;RUN=1;SAF=0;SAP=141.985;SAR=64;SRF=0;SRP=1375.38;SRR=632;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:105:103,2:103:3556:2:65:0,-25.4347,-314.095 0/1:125:112,13:112:3845:13:430:-1.39021,0,-308.641 0/0:85:81,4:81:2720:4:128:0,-13.7504,-233.211 0/0:111:110,1:110:3668:1:32:0,-30.215,-327.139 0/1:147:117,30:117:3958:30:1017:-47.5871,0,-312.179 0/1:123:109,14:109:3757:14:466:-5.23345,0,-301.323 dDocent_Contig_2479 107 . N C 672.596 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=23;CIGAR=1X;DP=23;DPB=23;DPRA=0;EPP=52.9542;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=733;QR=0;RO=0;RPL=0;RPP=52.9542;RPPR=0;RPR=23;RUN=1;SAF=0;SAP=52.9542;SAR=23;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:15:-1.49999,-0.30103,0 1/1:21:0,21:0:0:21:683:-61.7778,-6.32163,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_2480 21 . A G 233.625 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=3;CIGAR=1X1M1X2M1X;DP=251;DPB=251;DPRA=1.09091;EPP=9.52472;EPPR=504.62;GTI=0;LEN=1;MEANALT=2;MQM=56;MQMR=60;NS=6;NUMALT=2;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=119;QR=8884;RO=231;RPL=0;RPP=9.52472;RPPR=504.62;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=231;SRP=504.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:48:44,3,1:44:1707:3,1:119,40:0,-3.46896,-142.799,-9.94926,-140.407,-149.886 0|0:41:41,0,0:41:1600:0,0:0,0:0,-12.3422,-144.254,-12.3422,-144.254,-144.254 0|0:37:37,0,0:37:1410:0,0:0,0:0,-11.1381,-127.173,-11.1381,-127.173,-127.173 0|0:51:44,0,6:44:1653:0,6:0,238:-6.3448,-19.5901,-154.976,0,-135.382,-133.575 0|0:54:54,0,0:54:2091:0,0:0,0:0,-16.2556,-188.407,-16.2556,-188.407,-188.407 0|0:20:11,0,7:11:423:0,7:0,285:-20.2396,-23.5509,-58.2707,0,-34.7507,-32.6435 dDocent_Contig_2481 98 . N T 25254.6 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=829;CIGAR=2X;DP=829;DPB=829;DPRA=0;EPP=1803.16;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=28039;QR=0;RO=0;RPL=829;RPP=1803.16;RPPR=0;RPR=0;RUN=1;SAF=829;SAP=1803.16;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:217:0,217:0:0:217:7313:-658.282,-65.3235,0 1|1:188:0,188:0:0:188:6379:-574.254,-56.5936,0 1|1:124:0,124:0:0:124:4176:-376.049,-37.3277,0 1|1:160:0,160:0:0:160:5406:-486.714,-48.1648,0 1|1:80:0,80:0:0:80:2729:-245.864,-24.0824,0 1|1:60:0,60:0:0:60:2036:-183.517,-18.0618,0 dDocent_Contig_2482 7 . T G 927.543 . AB=0.0430622;ABP=382.041;AC=0;AF=0;AN=12;AO=9;CIGAR=1X3M1X2M1X;DP=293;DPB=293;DPRA=1.24405;EPP=22.5536;EPPR=502.449;GTI=0;LEN=1;MEANALT=2.5;MQM=46.6667;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.333333;PAIREDR=0.921739;PAO=0;PQA=0;PQR=0;PRO=0;QA=329;QR=8910;RO=230;RPL=0;RPP=22.5536;RPPR=502.449;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=230;SRP=502.449;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:48:32,2,13:32:1255:2,13:77,506:-31.9741,-35.2844,-137.899,0,-96.9205,-99.3292 0|0:65:56,2,6:56:2171:2,6:73,242:-3.12127,-14.6472,-192.387,0,-173.039,-176.579 0|0:42:40,0,2:40:1565:0,2:0,82:0,-12.0412,-140.703,-4.86358,-133.933,-133.331 0|0:54:46,3,5:46:1774:3,5:106,189:-1.659,-7.05885,-151.834,0,-137.251,-144.203 0|0:42:24,2,16:24:921:2,16:73,633:-44.913,-46.5172,-121.502,0,-70.0053,-70.812 0|0:42:32,0,9:32:1224:0,9:0,359:-19.9309,-29.5639,-129.989,0,-100.421,-97.7119 dDocent_Contig_2483 71 . C G 14217.4 . AB=0.438333;ABP=22.8286;AC=5;AF=0.416667;AN=12;AO=465;CIGAR=1X;DP=1083;DPB=1083;DPRA=0;EPP=1012.74;EPPR=1344.98;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995146;PAO=0;PQA=0;PQR=0;PRO=0;QA=18335;QR=24128;RO=618;RPL=465;RPP=1012.74;RPPR=1344.98;RPR=0;RUN=1;SAF=465;SAP=1012.74;SAR=0;SRF=618;SRP=1344.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:167:141,26:141:5371:26:988:-38.9585,0,-433.112 0/0:152:147,5:147:5622:5:195:0,-27.8324,-488.033 0/1:126:110,16:110:4394:16:644:-20.3653,0,-357.481 0/0:139:133,6:133:5308:6:233:0,-20.5072,-456.233 0/1:307:86,221:86:3394:221:8736:-693.369,0,-213.093 1/1:192:1,191:1:39:191:7539:-674.266,-53.9012,0 dDocent_Contig_2484 86 . C T 59532.9 . AB=0.825147;ABP=470.414;AC=10;AF=0.833333;AN=12;AO=1965;CIGAR=1X;DP=2096;DPB=2096;DPRA=0;EPP=4269.95;EPPR=283.13;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=69363;QR=4589;RO=129;RPL=1965;RPP=4269.95;RPPR=283.13;RPR=0;RUN=1;SAF=1965;SAP=4269.95;SAR=0;SRF=129;SRP=283.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:126:1,125:1:37:125:4404:-392.834,-34.232,0 1/1:262:10,252:10:354:252:8921:-770.67,-46.6704,0 0/1:234:34,199:34:1208:199:7017:-561.38,0,-38.8044 0/1:275:54,221:54:1922:221:7829:-621.856,0,-90.4714 1/1:653:0,652:0:0:652:22984:-2067.89,-196.272,0 1/1:546:30,516:30:1068:516:18208:-1541.88,-67.9318,0 dDocent_Contig_2485 1 . N G 119.841 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=121;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:40:-3.99568,-0.30103,0 dDocent_Contig_2486 34 . A G 2675.4 . AB=0.417021;ABP=17.0648;AC=2;AF=0.166667;AN=12;AO=99;CIGAR=1X;DP=577;DPB=577;DPRA=2.02094;EPP=217.986;EPPR=1040.97;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.98954;PAO=0;PQA=0;PQR=0;PRO=0;QA=3830;QR=18567;RO=478;RPL=0;RPP=217.986;RPPR=1040.97;RPR=99;RUN=1;SAF=99;SAP=217.986;SAR=0;SRF=478;SRP=1040.97;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:64:64,0:64:2506:0:0:0,-19.2659,-225.711 0/0:151:150,1:150:5817:1:40:0,-41.4598,-519.426 0/0:8:8,0:8:319:0:0:0,-2.40824,-29.0771 0/0:119:119,0:119:4609:0:0:0,-35.8226,-414.797 0/1:93:76,17:76:2982:17:617:-27.8401,0,-240.511 0/1:142:61,81:61:2334:81:3173:-242.921,0,-167.496 dDocent_Contig_2487 33 . A G 269.78 . AB=0.22807;ABP=39.6206;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=128;DPB=128;DPRA=1.60563;EPP=31.2394;EPPR=252.73;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=518;QR=4515;RO=115;RPL=0;RPP=31.2394;RPPR=252.73;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=115;SRP=252.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:594:0:0:0,-4.51545,-53.7982 0/0:10:10,0:10:361:0:0:0,-3.0103,-32.8165 0/0:32:32,0:32:1266:0:0:0,-9.63296,-114.208 0/0:14:14,0:14:558:0:0:0,-4.21442,-50.563 0/1:34:30,4:30:1178:4:155:-4.08864,0,-96.067 0/1:23:14,9:14:558:9:363:-26.1106,0,-43.6387 dDocent_Contig_2489 111 . G A 47.4381 . AB=0.131148;ABP=75.0961;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=382;DPB=382;DPRA=0.728507;EPP=29.068;EPPR=806.455;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.3919;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.856757;PAO=0;PQA=0;PQR=0;PRO=0;QA=409;QR=12320;RO=370;RPL=0;RPP=29.068;RPPR=806.455;RPR=12;RUN=1;SAF=0;SAP=29.068;SAR=12;SRF=0;SRP=806.455;SRR=370;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:64:64,0:64:2155:0:0:0,-19.2659,-193.762 0/0:56:54,2:54:1761:2:70:0,-10.2103,-150.942 0/1:61:53,8:53:1787:8:270:-6.26668,0,-142.619 0/0:44:42,2:42:1379:2:69:0,-6.69266,-117.845 0/0:79:79,0:79:2621:0:0:0,-23.7814,-235.689 0/0:78:78,0:78:2617:0:0:0,-23.4803,-235.787 dDocent_Contig_2490 41 . G C 143236 . AB=0.457158;ABP=32.4076;AC=10;AF=0.833333;AN=12;AO=4168;CIGAR=1X;DP=5217;DPB=5217;DPRA=0;EPP=9045.02;EPPR=2274.37;GTI=0;LEN=1;MEANALT=1.5;MQM=59.9974;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=167415;QR=41602;RO=1046;RPL=1;RPP=9045.02;RPPR=2274.37;RPR=4167;RUN=1;SAF=4168;SAP=9053.71;SAR=0;SRF=1046;SRP=2274.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:766:1,765:1:41:765:30671:-2753.41,-226.494,0 1/1:952:9,942:9:347:942:37891:-3374.92,-255.106,0 1/1:806:17,789:17:682:789:31663:-2784.92,-180.919,0 1/1:849:20,829:20:803:829:33319:-2922.95,-182.989,0 0/1:944:591,351:591:23506:351:14137:-987.237,0,-1829.53 0/1:900:408,492:408:16223:492:19734:-1503.4,0,-1187.85 dDocent_Contig_2491 83 . A G 5160.79 . AB=0.613208;ABP=38.4094;AC=6;AF=0.5;AN=12;AO=195;CIGAR=1X;DP=318;DPB=318;DPRA=0;EPP=426.447;EPPR=270.101;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6902;QR=4295;RO=123;RPL=195;RPP=426.447;RPPR=270.101;RPR=0;RUN=1;SAF=195;SAP=426.447;SAR=0;SRF=123;SRP=270.101;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:19,16:19:670:16:568:-40.9162,0,-50.0904 0/1:40:5,35:5:177:35:1229:-98.8718,0,-4.23578 0/1:40:17,23:17:573:23:826:-62.6226,0,-39.8451 0/1:47:13,34:13:466:34:1191:-93.3462,0,-28.1303 0/1:59:37,22:37:1290:22:780:-52.7626,0,-98.6399 0/1:97:32,65:32:1119:65:2308:-178.781,0,-71.8165 dDocent_Contig_2493 30 . G T 227.044 . AB=0.141667;ABP=136.845;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=465;DPB=465;DPRA=1.73913;EPP=39.9253;EPPR=975.83;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=667;QR=17918;RO=448;RPL=0;RPP=39.9253;RPPR=975.83;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=448;SRP=975.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:67:67,0:67:2696:0:0:0,-20.169,-242.75 0/0:89:89,0:89:3565:0:0:0,-26.7917,-320.871 0/0:43:43,0:43:1738:0:0:0,-12.9443,-156.635 0/0:55:55,0:55:2212:0:0:0,-16.5566,-199.242 0/0:91:91,0:91:3619:0:0:0,-27.3937,-325.722 0/1:120:103,17:103:4088:17:667:-24.2273,0,-331.775 dDocent_Contig_2494 32 . C T 349.747 . AB=0.175;ABP=113.104;AC=2;AF=0.166667;AN=12;AO=29;CIGAR=1X;DP=441;DPB=441;DPRA=1.08633;EPP=65.983;EPPR=897.657;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.931034;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1141;QR=15956;RO=412;RPL=0;RPP=65.983;RPPR=897.657;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=412;SRP=897.657;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:112:112,0:112:4377:0:0:0,-33.7154,-393.907 0/0:115:111,4:111:4311:4:162:0,-19.6515,-373.001 0/0:27:27,0:27:1041:0:0:0,-8.12781,-93.9802 0/0:67:63,4:63:2342:4:161:0,-5.29411,-196.083 0/1:56:50,6:50:1980:6:227:-3.93459,0,-161.537 0/1:64:49,15:49:1905:15:591:-34.2611,0,-152.393 dDocent_Contig_2495 20 . G C 29463.1 . AB=0.531671;ABP=15.9396;AC=10;AF=0.833333;AN=12;AO=789;CIGAR=1X2M;DP=1484;DPB=1484;DPRA=0;EPP=1716.3;EPPR=584.965;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=31473;QR=10296;RO=268;RPL=0;RPP=1716.3;RPPR=584.965;RPR=789;RUN=1;SAF=789;SAP=1716.3;SAR=0;SRF=268;SRP=584.965;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:303:4,54,12,231:4:152:54,12,231:2158,490,9196:-921.2,-744.662,-740.872,-881.973,-716.696,-890.826,-165.277,0,-137.309,-108.204 1|1:315:78,82,4,150:78:2989:82,4,150:3250,159,5952:-488.639,-244.622,-465.236,-499.029,-476.83,-743.125,-22.2067,0,-254.413,-222.349 0|1:221:64,44,0,113:64:2480:44,0,113:1741,0,4531:-354.034,-230.036,-420.523,-373.3,-433.768,-577.034,0,-60.4637,-203.733,-169.716 1|1:297:45,79,16,156:45:1712:79,16,156:3162,647,6216:-618.353,-371.429,-488.055,-578.556,-458.492,-714.147,-120.073,0,-207.132,-213.517 0|1:146:57,33,0,55:57:2207:33,0,55:1327,0,2197:-163.783,-71.5838,-242.94,-180.942,-252.874,-362.233,0,-71.924,-181.287,-164.73 1|1:202:20,35,63,84:20:756:35,63,84:1401,2445,3381:-411.526,-302.136,-353.564,-216.688,-163.24,-259.686,-138.897,-85.4468,0,-175.574 dDocent_Contig_2496 55 . C G 1268.61 . AB=0.161765;ABP=476.008;AC=2;AF=0.166667;AN=12;AO=78;CIGAR=1X;DP=1019;DPB=1019;DPRA=1.69577;EPP=172.385;EPPR=2046.37;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994687;PAO=0;PQA=0;PQR=0;PRO=0;QA=3041;QR=37452;RO=941;RPL=78;RPP=172.385;RPPR=2046.37;RPR=0;RUN=1;SAF=78;SAP=172.385;SAR=0;SRF=941;SRP=2046.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:130:130,0:130:5123:0:0:0,-39.1339,-460.932 0/0:153:153,0:153:6060:0:0:0,-46.0576,-545.202 0/0:95:95,0:95:3772:0:0:0,-28.5978,-339.491 0/0:165:164,1:164:6596:1:9:0,-48.77,-592.445 0/1:267:238,29:238:9449:29:1155:-23.8584,0,-769.462 0/1:209:161,48:161:6452:48:1877:-106.224,0,-517.481 dDocent_Contig_2499 19 . A T 332.784 . AB=0.351351;ABP=10.1116;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=120;DPB=120;DPRA=0.891566;EPP=31.2394;EPPR=235.358;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.990654;PAO=0;PQA=0;PQR=0;PRO=0;QA=521;QR=4147;RO=107;RPL=0;RPP=31.2394;RPPR=235.358;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=107;SRP=235.358;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:32,0:32:1236:0:0:0,-9.63296,-111.513 0/0:18:18,0:18:684:0:0:0,-5.41854,-61.8819 0/0:9:9,0:9:328:0:0:0,-2.70927,-29.8591 0/0:24:24,0:24:960:0:0:0,-7.22472,-86.7013 0/1:26:18,8:18:714:8:317:-21.0675,0,-56.76 0/1:11:6,5:6:225:5:204:-15.4327,0,-17.296 dDocent_Contig_2500 7 . C T 2122.29 . AB=0.0883978;ABP=2133.79;AC=5;AF=0.416667;AN=12;AO=151;CIGAR=1X7M;DP=1757;DPB=1757;DPRA=0;EPP=330.903;EPPR=3021.36;GTI=0;LEN=1;MEANALT=4.66667;MQM=60;MQMR=59.9813;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.992086;PAO=0;PQA=0;PQR=0;PRO=0;QA=5765;QR=53818;RO=1390;RPL=0;RPP=330.903;RPPR=3021.36;RPR=151;RUN=1;SAF=151;SAP=330.903;SAR=0;SRF=1390;SRP=3021.36;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:315:258,23,29:258:9980:23,29:906,1113:-13.6943,-17.14,-829.957,0,-745.521,-811.006 0|1:364:289,27,40:289:11257:27,40:1054,1520:-37.6554,-38.6161,-955.704,0,-839.183,-913.173 0|1:238:180,26,29:180:6987:26,29:1027,1107:-36.6324,-6.69806,-572.833,0,-489.841,-565.224 0|0:309:256,24,23:256:9871:24,23:931,883:0,-1.35125,-804.669,-4.58232,-739.412,-808.2 0|1:303:237,33,23:237:9179:33,23:1282,869:-32.9089,0,-744.114,-33.0244,-682.821,-780.142 0|1:228:170,47,7:170:6544:47,7:1852,273:-100.56,0,-523.153,-129.293,-514.86,-664.457 dDocent_Contig_2501 98 . N T 237.548 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=244;QR=0;RO=0;RPL=8;RPP=20.3821;RPPR=0;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:67:-6.36304,-0.60206,0 1/1:4:0,4:0:0:4:136:-12.5758,-1.20412,0 dDocent_Contig_2502 98 . N A 285.747 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=9;CIGAR=2X;DP=9;DPB=13;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=1.0842e-19;PAIRED=0.888889;PAIREDR=0;PAO=1;PQA=7;PQR=0;PRO=0;QA=302;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:1:0,1:0:0:1:34:-3.19397,-0.30103,0 .:.:.:.:.:.:.:. 1|1:5:0,5:0:0:5:171:-15.7267,-1.50515,0 .:.:.:.:.:.:.:. 1|1:3:0,3:0:0:3:97:-9.05117,-0.90309,0 .:.:.:.:.:.:.:. dDocent_Contig_2504 31 . C A 1985.23 . AB=0.160858;ABP=748.285;AC=4;AF=0.333333;AN=12;AO=140;CIGAR=1X;DP=1094;DPB=1094;DPRA=1.75357;EPP=307.016;EPPR=2068.08;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995794;PAO=0;PQA=0;PQR=0;PRO=0;QA=5523;QR=37890;RO=951;RPL=0;RPP=307.016;RPPR=2068.08;RPR=140;RUN=1;SAF=140;SAP=307.016;SAR=0;SRF=951;SRP=2068.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:200:171,29:171:6834:29:1154:-43.9362,0,-554.539 0/0:236:216,20:216:8540:20:758:0,-2.50408,-699.584 0/0:112:111,0:111:4474:0:0:0,-33.4143,-402.231 0/1:170:130,38:130:5175:38:1507:-85.0589,0,-414.789 0/1:184:166,18:166:6577:18:731:-10.7249,0,-536.259 0/1:192:157,35:157:6290:35:1373:-66.0252,0,-508.032 dDocent_Contig_2505 8 . C A 120.867 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=2;CIGAR=1M7I4M1X1M2D2M3D3M1X4M;DP=255;DPB=253.364;DPRA=2.88889;EPP=7.35324;EPPR=350.446;GTI=0;LEN=1;MEANALT=13;MQM=40;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=77;QR=6207;RO=160;RPL=0;RPP=7.35324;RPPR=350.446;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=160;SRP=350.446;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:63:34,0,0,5,0,0:34:1296:0,0,5,0,0:0,0,184,0,0:-4.03183,-14.2669,-120.589,-14.2669,-120.589,-120.589,0,-106.324,-106.324,-104.819,-14.2669,-120.589,-120.589,-106.324,-120.589,-14.2669,-120.589,-120.589,-106.324,-120.589,-120.589 0|0:65:42,0,2,0,2,2:42:1623:0,2,0,2,2:0,77,0,78,77:0,-12.6433,-145.953,-6.73507,-140.045,-139.443,-12.6433,-145.953,-140.045,-145.953,-6.68724,-139.997,-134.089,-139.997,-139.395,-6.73507,-140.045,-134.137,-140.045,-134.089,-139.443 0|0:30:22,2,0,1,0,0:22:864:2,0,1,0,0:74,0,33,0,0:0,-0.883739,-71.3709,-6.62266,-71.973,-77.7112,-4.02973,-69.3774,-75.1154,-74.8144,-6.62266,-71.973,-77.7112,-75.1154,-77.7112,-6.62266,-71.973,-77.7112,-75.1154,-77.7112,-77.7112 0|0:42:24,1,0,6,0,0:24:947:1,0,6,0,0:37,0,216,0,0:-9.51473,-13.8694,-91.5124,-16.7395,-91.8135,-94.6831,0,-75.0741,-77.9434,-76.1372,-16.7395,-91.8135,-94.6831,-77.9434,-94.6831,-16.7395,-91.8135,-94.6831,-77.9434,-94.6831,-94.6831 0|0:15:12,0,0,0,0,0:12:458:0,0,0,0,0:0,0,0,0,0:0,-3.61236,-41.1984,-3.61236,-41.1984,-41.1984,-3.61236,-41.1984,-41.1984,-41.1984,-3.61236,-41.1984,-41.1984,-41.1984,-41.1984,-3.61236,-41.1984,-41.1984,-41.1984,-41.1984,-41.1984 0|0:40:26,0,0,4,0,0:26:1019:0,0,4,0,0:0,0,150,0,0:-3.75996,-11.5867,-95.4073,-11.5867,-95.4073,-95.4073,0,-83.8234,-83.8234,-82.6193,-11.5867,-95.4073,-95.4073,-83.8234,-95.4073,-11.5867,-95.4073,-95.4073,-83.8234,-95.4073,-95.4073 dDocent_Contig_2506 21 . G A 1240.75 . AB=0.169811;ABP=404.528;AC=2;AF=0.166667;AN=12;AO=75;CIGAR=1X;DP=959;DPB=959;DPRA=1.38557;EPP=165.871;EPPR=1920.42;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998867;PAO=0;PQA=0;PQR=0;PRO=0;QA=2946;QR=33516;RO=883;RPL=0;RPP=165.871;RPPR=1920.42;RPR=75;RUN=1;SAF=75;SAP=165.871;SAR=0;SRF=883;SRP=1920.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:139:139,0:139:5277:0:0:0,-41.8432,-474.912 0/1:177:136,41:136:5045:41:1599:-90.858,0,-400.781 0/0:133:130,3:130:4972:3:121:0,-28.7568,-436.181 0/1:247:215,31:215:8142:31:1226:-36.439,0,-658.344 0/0:85:85,0:85:3293:0:0:0,-25.5875,-296.475 0/0:178:178,0:178:6787:0:0:0,-53.5833,-610.67 dDocent_Contig_2507 63 . G T 5596.28 . AB=0.625407;ABP=44.9473;AC=2;AF=0.166667;AN=12;AO=193;CIGAR=1X;DP=711;DPB=711;DPRA=1.19444;EPP=422.104;EPPR=1127.83;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.994819;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7318;QR=19321;RO=518;RPL=193;RPP=422.104;RPPR=1127.83;RPR=0;RUN=1;SAF=193;SAP=422.104;SAR=0;SRF=518;SRP=1127.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:90:90,0:90:3403:0:0:0,-27.0927,-306.414 0/0:91:91,0:91:3239:0:0:0,-27.3937,-291.712 0/0:80:79,1:79:3006:1:40:0,-20.0867,-266.714 0/0:143:143,0:143:5295:0:0:0,-43.0473,-476.561 0/1:206:40,166:40:1566:166:6291:-504.113,0,-79.1836 0/1:101:75,26:75:2812:26:987:-58.7371,0,-222.865 dDocent_Contig_2508 34 . T C 59916.6 . AB=0.190883;ABP=585.645;AC=2;AF=0.166667;AN=12;AO=135;CIGAR=1M1I5M1X1M;DP=1976;DPB=2211.62;DPRA=1.27889;EPP=296.159;EPPR=191.928;GTI=0;LEN=1;MEANALT=3.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5162;QR=3396;RO=87;RPL=0;RPP=296.159;RPPR=191.928;RPR=135;RUN=1;SAF=135;SAP=296.159;SAR=0;SRF=87;SRP=191.928;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:227:6,0,216:6:238:0,216:0,8107:-707.588,-709.394,-728.987,-45.3832,-65.0225,0 0|0:368:49,0,318:49:1892:0,318:0,12175:-984.263,-999.013,-1154.39,0,-155.387,-59.659 0|0:355:24,1,329:24:950:1,329:40,12645:-1051.54,-1055.47,-1133.36,-20.712,-95.7432,0 0|0:324:8,0,314:8:316:0,314:0,11984:-1049.15,-1051.56,-1077.56,-68.4879,-94.5234,0 1|0:333:0,86,245:0:0:86,245:3304,9471:-1049,-777.811,-751.922,-271.181,0,-197.428 1|0:369:0,48,320:0:0:48,320:1818,12262:-1155.35,-1006.34,-991.89,-149.142,0,-52.8126 dDocent_Contig_2509 8 . A G 2902.66 . AB=0.333333;ABP=88.4215;AC=4;AF=0.333333;AN=12;AO=121;CIGAR=1X;DP=481;DPB=481;DPRA=1.43051;EPP=265.758;EPPR=784.74;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.95;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.809917;PAIREDR=0.85;PAO=0;PQA=0;PQR=0;PRO=0;QA=4593;QR=13754;RO=360;RPL=0;RPP=265.758;RPPR=784.74;RPR=121;RUN=1;SAF=121;SAP=265.758;SAR=0;SRF=360;SRP=784.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:60:53,7:53:2038:7:271:-6.69464,0,-165.593 0/1:122:62,60:62:2372:60:2244:-165.455,0,-176.966 0/1:72:50,22:50:1897:22:843:-54.5186,0,-149.26 0/1:100:71,29:71:2695:29:1118:-70.8197,0,-212.636 0/0:59:59,0:59:2255:0:0:0,-17.7608,-203.171 0/0:68:65,3:65:2497:3:117:0,-9.55966,-214.021 dDocent_Contig_2510 32 . A T 139.209 . AB=0.131313;ABP=119.897;AC=1;AF=0.0833333;AN=12;AO=30;CIGAR=1X;DP=618;DPB=618;DPRA=1.0875;EPP=68.1545;EPPR=1279.84;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.935374;PAO=0;PQA=0;PQR=0;PRO=0;QA=1174;QR=23432;RO=588;RPL=0;RPP=68.1545;RPPR=1279.84;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=588;SRP=1279.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:72:71,1:71:2811:1:41:0,-17.5796,-249.008 0/0:149:144,5:144:5767:5:190:0,-27.3878,-501.363 0/0:101:98,3:98:3932:3:123:0,-18.9392,-342.399 0/0:96:96,0:96:3825:0:0:0,-28.8989,-344.246 0/1:99:86,13:86:3439:13:499:-15.4437,0,-279.754 0/0:101:93,8:93:3658:8:321:0,-1.14649,-299.985 dDocent_Contig_2511 16 . A T 7836.92 . AB=0.515539;ABP=4.15757;AC=6;AF=0.5;AN=12;AO=282;CIGAR=1X1M1X4M;DP=547;DPB=547;DPRA=0;EPP=615.366;EPPR=554.564;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.978723;PAIREDR=0.976378;PAO=0;PQA=0;PQR=0;PRO=0;QA=10617;QR=9904;RO=254;RPL=0;RPP=615.366;RPPR=554.564;RPR=282;RUN=1;SAF=282;SAP=615.366;SAR=0;SRF=254;SRP=554.564;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:76:31,0,45:31:1206:0,45:0,1663:-127.049,-136.381,-235.496,0,-99.4958,-85.9495 0|1:83:42,0,41:42:1617:0,41:0,1562:-115.866,-128.509,-261.263,0,-133.137,-120.794 0|1:58:22,4,31:22:863:4,31:162,1189:-90.9471,-84.2091,-153.978,0,-57.6,-61.6283 0|1:102:18,0,78:18:708:0,78:0,2913:-233.065,-238.483,-296.725,0,-58.2425,-34.7621 0|1:129:78,0,51:78:3041:0,51:0,1926:-134.746,-158.226,-408.183,0,-250.339,-234.986 0|1:99:63,0,36:63:2469:0,36:0,1364:-93.2416,-112.207,-315.244,0,-203.42,-192.583 dDocent_Contig_2512 107 . N G 545.425 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=18;CIGAR=1X;DP=18;DPB=18;DPRA=0;EPP=42.0968;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=588;QR=0;RO=0;RPL=0;RPP=42.0968;RPPR=0;RPR=18;RUN=1;SAF=0;SAP=42.0968;SAR=18;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:20:-1.99996,-0.30103,0 1/1:8:0,8:0:0:8:277:-25.267,-2.40824,0 ./.:.:.:.:.:.:.:. 1/1:8:0,8:0:0:8:277:-25.267,-2.40824,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:14:-1.39999,-0.30103,0 dDocent_Contig_2513 117 . T A 670.74 . AB=0.111913;ABP=1090.12;AC=2;AF=0.166667;AN=12;AO=142;CIGAR=1X;DP=2209;DPB=2209;DPRA=0;EPP=311.359;EPPR=4491.44;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5415;QR=78037;RO=2067;RPL=0;RPP=311.359;RPPR=4491.44;RPR=142;RUN=1;SAF=0;SAP=311.359;SAR=142;SRF=0;SRP=4491.44;SRR=2067;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:314:311,3:311:11796:3:113:0,-83.9844,-1050.65 0/0:364:352,12:352:13292:12:459:0,-67.9161,-1154.08 0/0:337:317,20:317:11970:20:752:0,-33.4502,-1008.85 0/0:363:349,14:349:13146:14:536:0,-60.6894,-1134.04 0/1:411:356,55:356:13405:55:2103:-65.7707,0,-1082.17 0/1:420:382,38:382:14428:38:1452:-4.52497,0,-1171.45 dDocent_Contig_2514 7 . A G 17001.3 . AB=0.350097;ABP=503.643;AC=6;AF=0.5;AN=12;AO=898;CIGAR=1X;DP=2565;DPB=2565;DPRA=0;EPP=1952.99;EPPR=3572.91;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=27520;QR=62413;RO=1644;RPL=0;RPP=1952.99;RPPR=3572.91;RPR=898;RUN=1;SAF=898;SAP=1952.99;SAR=0;SRF=1644;SRP=3572.91;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:357:171,180:171:6490:180:5330:-373.974,0,-478.205 0/1:320:182,134:182:6871:134:4077:-271.774,0,-523.008 0/1:396:152,240:152:5787:240:7377:-545.793,0,-402.656 0/1:357:167,187:167:6325:187:5912:-425.408,0,-462.462 0/1:632:536,92:536:20392:92:2956:-76.9967,0,-1645.01 0/1:503:436,65:436:16548:65:1868:-17.4067,0,-1337.62 dDocent_Contig_2515 98 . N T 124.32 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:19:-1.89997,-0.30103,0 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_2516 33 . G A 368.553 . AB=0.139013;ABP=255.417;AC=2;AF=0.166667;AN=12;AO=40;CIGAR=1X;DP=573;DPB=573;DPRA=1.03209;EPP=89.8692;EPPR=1151.74;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.913696;PAO=0;PQA=0;PQR=0;PRO=0;QA=1542;QR=20895;RO=533;RPL=0;RPP=89.8692;RPPR=1160.41;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=532;SRP=1151.74;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:80:74,6:74:2888:6:243:0,-1.83443,-237.798 0/1:125:106,19:106:4181:19:725:-27.9319,0,-338.659 0/1:98:86,12:86:3347:12:459:-12.1452,0,-271.809 0/0:83:80,3:80:3116:3:115:0,-14.2614,-269.807 0/0:108:108,0:108:4261:0:0:0,-32.5112,-383.478 0/0:79:79,0:79:3102:0:0:0,-23.7814,-279.281 dDocent_Contig_2517 10 . G T 12451 . AB=0.154229;ABP=211.742;AC=9;AF=0.75;AN=12;AO=34;CIGAR=1X7M;DP=509;DPB=459.875;DPRA=0;EPP=76.8404;EPPR=141.985;GTI=0;LEN=1;MEANALT=3.2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1235;QR=2459;RO=64;RPL=0;RPP=76.8404;RPPR=141.985;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=64;SRP=141.985;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:93:9,63,21,0:9:337:63,21,0:2415,753,0:-229.289,-33.7807,-42.4159,-170.613,0,-191.886,-231.999,-61.3807,-198.207,-259.594 1|1:143:9,128,2,3:9:349:128,2,3:4841,74,121:-403.941,-9.85416,0,-400.596,-32.4801,-428.668,-396.675,-28.553,-419.295,-424.446 0|1:57:17,33,4,3:17:664:33,4,3:1281,152,123:-100.127,0,-44.6506,-92.7799,-42.1212,-146.162,-95.0906,-44.4297,-137.213,-148.775 0|1:51:6,37,6,2:6:237:37,6,2:1413,218,79:-114.122,0,-8.37491,-98.1317,-1.72717,-115.83,-109.427,-13.0102,-111.135,-128.33 0|1:40:13,21,0,6:13:489:21,0,6:827,0,227:-64.1335,0,-33.7392,-68.0469,-40.0608,-108.105,-49.4481,-21.4579,-89.5036,-87.6974 1|1:125:10,109,1,4:10:383:109,1,4:4172,38,160:-340.708,-1.3894,0,-340.601,-29.6963,-371.732,-330.537,-19.6284,-358.852,-360.765 dDocent_Contig_2518 51 . C T 53.4267 . AB=0.153846;ABP=30.0702;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=123;DPB=123;DPRA=1.34021;EPP=11.6962;EPPR=261.416;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.831933;PAO=0;PQA=0;PQR=0;PRO=0;QA=159;QR=4618;RO=119;RPL=4;RPP=11.6962;RPPR=261.416;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=119;SRP=261.416;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:737:0:0:0,-6.0206,-66.6309 0/0:19:19,0:19:723:0:0:0,-5.71957,-65.3831 0/0:20:20,0:20:774:0:0:0,-6.0206,-69.9744 0/0:20:20,0:20:797:0:0:0,-6.0206,-72.0486 0/0:18:18,0:18:722:0:0:0,-5.41854,-65.3067 0/1:26:22,4:22:865:4:159:-6.86555,0,-70.3271 dDocent_Contig_2519 59 . G A 78.7981 . AB=0.100418;ABP=334.464;AC=2;AF=0.166667;AN=12;AO=94;CIGAR=1X;DP=1392;DPB=1392;DPRA=0;EPP=207.129;EPPR=2819.41;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3538;QR=48033;RO=1297;RPL=94;RPP=207.129;RPPR=2819.41;RPR=0;RUN=1;SAF=94;SAP=207.129;SAR=0;SRF=1297;SRP=2819.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:252:242,10:242:8701:10:367:0,-42.4817,-749.636 0/0:308:289,19:289:10441:19:694:0,-29.9267,-876.727 0/0:284:269,15:269:10134:15:575:0,-33.4003,-859.616 0/0:309:282,26:282:10648:26:987:0,-3.95503,-868.803 0/1:136:123,13:123:4611:13:500:-4.40798,0,-374.091 0/1:103:92,11:92:3498:11:415:-6.69339,0,-283.94 dDocent_Contig_2520 42 . C T 10750.2 . AB=0.0714286;ABP=114.686;AC=0;AF=0;AN=12;AO=5;CIGAR=2X;DP=427;DPB=427;DPRA=0.823529;EPP=13.8677;EPPR=187.585;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=185;QR=3359;RO=85;RPL=0;RPP=13.8677;RPPR=187.585;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=85;SRP=187.585;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:32:15,0,0,17:15:598:0,0,17:0,0,681:-51.9871,-56.5026,-105.746,-56.5026,-105.746,-105.746,0,-49.6428,-49.6428,-44.5253 0|0:62:9,0,0,53:9:353:0,0,53:0,0,2107:-171.154,-173.863,-202.892,-173.863,-202.892,-202.892,0,-29.4211,-29.4211,-13.4665 0|0:94:35,0,0,59:35:1384:0,0,59:0,0,2370:-185.159,-195.695,-309.584,-195.695,-309.584,-309.584,0,-114.286,-114.286,-96.5251 0|0:70:18,0,5,47:18:707:0,5,47:0,185,1854:-147.13,-152.548,-210.692,-137.421,-195.564,-194.059,0,-58.1611,-43.0363,-44.0127 0|0:85:1,5,0,79:1:39:5,0,79:194,0,3145:-279.232,-263.596,-265.297,-279.533,-266.802,-282.739,-20.5752,-7.84576,-23.7814,0 0|0:84:7,0,0,77:7:278:0,0,77:0,0,3032:-247.687,-249.794,-272.68,-249.794,-272.68,-272.68,0,-23.2821,-23.2821,-0.102834 dDocent_Contig_2521 1 . N G 219.445 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=232;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:192:-17.6466,-1.50515,0 1/1:1:0,1:0:0:1:40:-3.99568,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_2522 98 . N A 163.876 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=167;QR=0;RO=0;RPL=8;RPP=20.3821;RPPR=0;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 1/1:2:0,2:0:0:2:42:-3.9887,-0.60206,0 1/1:4:0,4:0:0:4:111:-10.2656,-1.20412,0 ./.:.:.:.:.:.:.:. dDocent_Contig_2523 107 . N C 89.1163 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=89;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:58:-5.50935,-0.60206,0 1/1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 dDocent_Contig_2524 12 . T A 116046 . AB=0.752929;ABP=2800.78;AC=6;AF=0.5;AN=12;AO=3791;CIGAR=1X;DP=5035;DPB=5035;DPRA=0;EPP=8235.06;EPPR=2682.61;GTI=0;LEN=1;MEANALT=1.83333;MQM=59.9559;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=0.999736;PAIREDR=0.997569;PAO=0;PQA=0;PQR=0;PRO=0;QA=146011;QR=48099;RO=1234;RPL=0;RPP=8235.06;RPPR=2682.61;RPR=3791;RUN=1;SAF=3791;SAP=8235.06;SAR=0;SRF=1234;SRP=2682.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:710:74,635:74:2885:635:24465:-1986.6,0,-46.2434 0/1:882:217,664:217:8462:664:25529:-2030.18,0,-495.588 0/1:720:232,488:232:8997:488:18877:-1480.87,0,-592.584 0/1:825:141,683:141:5508:683:26106:-2099.22,0,-247.158 0/1:970:171,795:171:6686:795:30602:-2460.28,0,-310.352 0/1:928:399,526:399:15561:526:20432:-1558.64,0,-1120.67 dDocent_Contig_2525 1 . N G 262.632 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=8;CIGAR=1X;DP=10;DPB=10;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=271;QR=0;RO=0;RPL=0;RPP=20.3821;RPPR=0;RPR=8;RUN=1;SAF=0;SAP=20.3821;SAR=8;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:3:0,3:0:0:3:101:-9.42373,-0.90309,0 1/1:2:0,1:0:0:1:34:-3.14397,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,1:0:0:1:34:-3.05902,-0.30103,0 dDocent_Contig_2526 15 . A T 1012.22 . AB=0.131621;ABP=737.341;AC=3;AF=0.25;AN=12;AO=90;CIGAR=1X;DP=1367;DPB=1367;DPRA=0.831698;EPP=198.443;EPPR=2775.98;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3574;QR=50345;RO=1277;RPL=0;RPP=198.443;RPPR=2775.98;RPR=90;RUN=1;SAF=90;SAP=198.443;SAR=0;SRF=1277;SRP=2775.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:199:177,22:177:6934:22:874:-19.0574,0,-563.904 0/0:214:207,7:207:8141:7:276:0,-39.2145,-707.105 0/1:182:158,24:158:6246:24:958:-31.7328,0,-507.144 0/1:242:206,36:206:8116:36:1425:-55.6534,0,-657.203 0/0:265:265,0:265:10488:0:0:0,-79.7729,-943.304 0/0:265:264,1:264:10420:1:41:0,-75.6784,-933.085 dDocent_Contig_2527 64 . T C 547.868 . AB=0.206107;ABP=101.29;AC=2;AF=0.166667;AN=12;AO=27;CIGAR=1X;DP=292;DPB=292;DPRA=1.62733;EPP=61.6401;EPPR=578.45;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.888889;PAIREDR=0.89434;PAO=0;PQA=0;PQR=0;PRO=0;QA=1075;QR=10544;RO=265;RPL=27;RPP=61.6401;RPPR=578.45;RPR=0;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=265;SRP=578.45;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1396:0:0:0,-10.536,-125.896 0/0:53:53,0:53:2107:0:0:0,-15.9546,-189.814 0/0:34:34,0:34:1366:0:0:0,-10.235,-123.195 0/0:39:39,0:39:1537:0:0:0,-11.7402,-138.57 0/1:32:26,6:26:1036:6:242:-12.5246,0,-83.8932 0/1:99:78,21:78:3102:21:833:-45.484,0,-249.451 dDocent_Contig_2528 7 . G A 7187.48 . AB=0.189417;ABP=1095.57;AC=2;AF=0.166667;AN=12;AO=247;CIGAR=1X1M1X;DP=1304;DPB=1304;DPRA=0;EPP=24.1184;EPPR=1477.44;GTI=0;LEN=1;MEANALT=5.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.376518;PAIREDR=0.929308;PAO=0;PQA=0;PQR=0;PRO=0;QA=8840;QR=21433;RO=679;RPL=0;RPP=539.364;RPPR=1477.44;RPR=247;RUN=1;SAF=148;SAP=24.1184;SAR=99;SRF=679;SRP=1477.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:142:69,32,37:69:2182:32,37:1139,1207:-76.6638,-4.59449,-170.496,0,-82.6839,-164.381 0|0:260:131,53,66:131:4116:53,66:1886,2273:-145.156,-30.8858,-345.783,0,-177.141,-310.979 0|0:129:59,21,48:59:1835:21,48:766,1647:-115.923,-71.0999,-212.091,0,-84.7023,-132.844 0|0:245:123,35,74:123:3841:35,74:1247,2566:-171.531,-106.919,-404.918,0,-206.903,-286.268 0|1:209:131,34,35:131:4191:34,35:1207,1121:-58.9204,0,-327.376,-8.06388,-247.315,-335.119 0|1:319:166,72,66:166:5268:72,66:2595,2324:-161.775,0,-402.278,-22.5695,-234.772,-426.648 dDocent_Contig_2530 7 . A G 1110.17 . AB=0.158322;ABP=752.374;AC=1;AF=0.0833333;AN=12;AO=257;CIGAR=1X;DP=5748;DPB=5748;DPRA=0;EPP=561.079;EPPR=11891.8;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99032;PAO=0;PQA=0;PQR=0;PRO=0;QA=8036;QR=208037;RO=5475;RPL=0;RPP=561.079;RPPR=11891.8;RPR=257;RUN=1;SAF=257;SAP=561.079;SAR=0;SRF=5475;SRP=11891.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:739:620,117:620:23483:117:3713:-112.239,0,-1890.15 0/0:937:905,28:905:34368:28:863:0,-203.11,-3013.17 0/0:711:693,17:693:26420:17:574:0,-162.049,-2324.35 0/0:1209:1186,19:1186:44963:19:579:0,-310.522,-3991.54 0/0:1178:1141,36:1141:43455:36:1083:0,-256.706,-3810.56 0/0:974:930,40:930:35348:40:1224:0,-181.767,-3068.82 dDocent_Contig_2531 48 . A C 162.944 . AB=0.131313;ABP=119.897;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=712;DPB=712;DPRA=0.770428;EPP=42.0968;EPPR=1507.84;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.974026;PAO=0;PQA=0;PQR=0;PRO=0;QA=714;QR=27308;RO=693;RPL=0;RPP=42.0968;RPPR=1507.84;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=693;SRP=1507.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:99:85,13:85:3399:13:523:-17.5163,0,-276.06 0/0:99:94,5:94:3660:5:191:0,-12.2492,-311.89 0/0:94:94,0:94:3717:0:0:0,-28.2968,-334.557 0/0:159:159,0:159:6268:0:0:0,-47.8638,-563.904 0/0:120:120,0:120:4707:0:0:0,-36.1236,-423.563 0/0:141:141,0:141:5557:0:0:0,-42.4452,-499.968 dDocent_Contig_2532 13 . G T 18784.4 . AB=0.621756;ABP=132.033;AC=6;AF=0.5;AN=12;AO=623;CIGAR=1X;DP=1002;DPB=1002;DPRA=0;EPP=1355.84;EPPR=799.941;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=24319;QR=14393;RO=367;RPL=0;RPP=1355.84;RPPR=799.941;RPR=623;RUN=1;SAF=623;SAP=1355.84;SAR=0;SRF=367;SRP=799.941;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:116:48,68:48:1906:68:2648:-203.547,0,-136.831 0/1:167:61,103:61:2385:103:4012:-311.36,0,-165.046 0/1:226:96,122:96:3736:122:4803:-366.194,0,-270.245 0/1:174:81,93:81:3174:93:3650:-276.187,0,-233.371 0/1:140:21,118:21:824:118:4551:-367.335,0,-32.2373 0/1:179:60,119:60:2368:119:4655:-365.035,0,-159.394 dDocent_Contig_2533 44 . G C 170.918 . AB=0.16092;ABP=89.8942;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=1X;DP=634;DPB=634;DPRA=0.785915;EPP=57.2971;EPPR=1325.44;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.988506;PAO=0;PQA=0;PQR=0;PRO=0;QA=918;QR=23915;RO=609;RPL=0;RPP=57.2971;RPPR=1325.44;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=609;SRP=1325.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:87:73,14:73:2878:14:491:-18.3136,0,-232.953 0/0:99:93,6:93:3624:6:228:0,-8.91921,-305.327 0/0:104:104,0:104:4084:0:0:0,-31.3071,-367.559 0/0:93:88,5:88:3455:5:199:0,-9.70773,-292.739 0/0:131:131,0:131:5164:0:0:0,-39.4349,-464.653 0/0:120:120,0:120:4710:0:0:0,-36.1236,-423.847 dDocent_Contig_2534 13 . A T 513.604 . AB=0.149826;ABP=308.689;AC=2;AF=0.166667;AN=12;AO=49;CIGAR=1X;DP=1177;DPB=1177;DPRA=0.865293;EPP=109.412;EPPR=2450.26;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1775;QR=43483;RO=1127;RPL=0;RPP=109.412;RPPR=2450.26;RPR=49;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=1127;SRP=2450.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:114:102,12:102:3893:12:447:-6.2565,0,-316.117 0/1:173:141,31:141:5458:31:1112:-48.3257,0,-439.098 0/0:246:246,0:246:9514:0:0:0,-74.0534,-855.814 0/0:259:253,6:253:9824:6:216:0,-58.1785,-863.891 0/0:155:155,0:155:5925:0:0:0,-46.6596,-533.117 0/0:230:230,0:230:8869:0:0:0,-69.2369,-797.803 dDocent_Contig_2535 106 . N G 541.565 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=18;CIGAR=2X;DP=19;DPB=19;DPRA=0;EPP=42.0968;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=17.0818;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=602;QR=0;RO=0;RPL=0;RPP=42.0968;RPPR=0;RPR=18;RUN=1;SAF=0;SAP=42.0968;SAR=18;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:19:0,18:0:0:18:602:-54.1565,-5.41854,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_2536 52 . T A 9429.14 . AB=0.508661;ABP=3.42408;AC=3;AF=0.25;AN=12;AO=331;CIGAR=1M1D2X;DP=886;DPB=802.5;DPRA=2.47315;EPP=721.768;EPPR=1195.15;GTI=0;LEN=1;MEANALT=2.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=12960;QR=20872;RO=549;RPL=331;RPP=721.768;RPPR=1195.15;RPR=0;RUN=1;SAF=331;SAP=721.768;SAR=0;SRF=549;SRP=1195.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:91:91,0:91:3453:0:0:0,-27.3937,-310.895 0|0:102:94,8:94:3604:8:308:0,-2.62603,-296.394 0|0:58:57,0:57:2180:0:0:0,-17.1587,-196.324 0|1:224:198,25:198:7571:25:982:-21.2771,0,-613.802 0|1:246:57,187:57:2130:187:7295:-582.592,0,-118.229 0|1:165:52,111:52:1934:111:4375:-344.266,0,-124.826 dDocent_Contig_2537 7 . A G 19581.3 . AB=0.395419;ABP=222.838;AC=6;AF=0.5;AN=12;AO=915;CIGAR=1X3M;DP=2314;DPB=2314;DPRA=0;EPP=1989.91;EPPR=2812.9;GTI=0;LEN=1;MEANALT=4.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=29282;QR=49766;RO=1294;RPL=0;RPP=1989.91;RPPR=2812.9;RPR=915;RUN=1;SAF=915;SAP=1989.91;SAR=0;SRF=1294;SRP=2812.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:300:123,2,167:123:4715:2,167:61,5408:-399.323,-431.464,-817.871,0,-382.313,-336.925 0|1:227:82,7,127:82:3165:7,127:210,3985:-295.619,-303.517,-561.37,0,-243.274,-221.825 0|1:240:64,8,158:64:2474:8,158:285,5281:-408.256,-404.298,-605.115,0,-180.08,-155.74 0|1:424:157,29,229:157:5993:29,229:989,7199:-531.389,-498.416,-981.394,0,-411.51,-422.801 0|1:563:467,3,90:467:17999:3,90:101,2808:-84.9208,-217.317,-1694.47,0,-1469.87,-1450.97 0|1:560:401,5,144:401:15420:5,144:168,4601:-249.849,-356.954,-1621.45,0,-1252.46,-1222.72 dDocent_Contig_2538 153 . G A 105.544 . AB=0.128205;ABP=96.662;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=285;DPB=285;DPRA=3.0625;EPP=39.9253;EPPR=580.622;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=644;QR=10444;RO=266;RPL=0;RPP=39.9253;RPPR=580.622;RPR=17;RUN=1;SAF=0;SAP=39.9253;SAR=17;SRF=0;SRP=580.622;SRR=266;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:78:67,10:67:2616:10:389:-11.7762,0,-211.997 0/0:37:35,2:35:1366:2:79:0,-3.64048,-115.706 0/0:95:92,3:92:3601:3:122:0,-17.2254,-312.751 0/0:35:33,2:33:1326:2:54:0,-5.41016,-114.477 0/0:15:14,0:14:570:0:0:0,-4.21442,-51.2607 0/0:25:25,0:25:965:0:0:0,-7.52575,-87.1479 dDocent_Contig_2539 52 . A T 16858.3 . AB=0.356328;ABP=317.485;AC=3;AF=0.25;AN=12;AO=640;CIGAR=1X;DP=3852;DPB=3852;DPRA=0.817701;EPP=1392.75;EPPR=6973.44;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0.629687;PAIREDR=0.681931;PAO=0;PQA=0;PQR=0;PRO=0;QA=25273;QR=126269;RO=3210;RPL=640;RPP=1392.75;RPPR=6973.44;RPR=0;RUN=1;SAF=640;SAP=1392.75;SAR=0;SRF=3210;SRP=6973.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:411:404,7:404:15824:7:284:0,-97.7895,-1397.13 0/1:582:372,210:372:14717:210:8295:-570.927,0,-1148.26 0/1:498:298,200:298:11719:200:7928:-563.201,0,-904.032 0/1:674:458,215:458:17935:215:8445:-556.924,0,-1410.16 0/0:757:756,0:756:29642:0:0:0,-227.579,-2665.08 0/0:930:922,8:922:36432:8:321:0,-250.7,-3246.44 dDocent_Contig_2540 10 . A T 2068.81 . AB=0.131072;ABP=1536.35;AC=3;AF=0.25;AN=12;AO=214;CIGAR=1X2M1X;DP=2693;DPB=2693;DPRA=0;EPP=467.705;EPPR=5064.71;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8178;QR=77717;RO=2331;RPL=0;RPP=467.705;RPPR=5064.71;RPR=214;RUN=1;SAF=214;SAP=467.705;SAR=0;SRF=2331;SRP=5064.71;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:377:308,62,5:308:10300:62,5:2387,63:-103.455,0,-815.309,-192.026,-829.812,-1024.31 0|1:394:319,62,10:319:10715:62,10:2378,177:-99.3233,0,-849.338,-182.46,-855.088,-1047.27 0|0:405:360,28,15:360:11970:28,15:1060,212:0,-21.3282,-981.502,-93.8808,-975.374,-1057.76 0|0:467:441,7,13:441:14595:7,13:268,219:0,-110.705,-1288.9,-117.022,-1275.22,-1293.3 0|1:526:445,46,23:445:14824:46,23:1746,321:-9.32533,0,-1185.87,-121.38,-1177.76,-1314.02 0|0:524:458,9,29:458:15313:9,29:339,434:0,-110.077,-1347.08,-107.636,-1319.47,-1338.52 dDocent_Contig_2541 32 . C T 62.1569 . AB=0.115942;ABP=91.4113;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=210;DPB=210;DPRA=0.978723;EPP=20.3821;EPPR=441.648;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.910891;PAO=0;PQA=0;PQR=0;PRO=0;QA=327;QR=7834;RO=202;RPL=0;RPP=20.3821;RPPR=441.648;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=202;SRP=441.648;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:1111:0:0:0,-8.72987,-100.28 0/1:35:31,4:31:1220:4:164:-4.61385,0,-99.5402 0/0:29:29,0:29:1138:0:0:0,-8.72987,-102.704 0/0:34:34,0:34:1307:0:0:0,-10.235,-117.905 0/0:49:49,0:49:1901:0:0:0,-14.7505,-171.303 0/1:34:30,4:30:1157:4:163:-4.82341,0,-94.1712 dDocent_Contig_2542 11 . T G 35.3664 . AB=0.109589;ABP=99.6557;AC=3;AF=0.25;AN=12;AO=8;CIGAR=1X;DP=130;DPB=130;DPRA=1.2807;EPP=7.35324;EPPR=210.617;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.5;PAIREDR=0.54918;PAO=0;PQA=0;PQR=0;PRO=0;QA=317;QR=4402;RO=122;RPL=0;RPP=20.3821;RPPR=267.93;RPR=8;RUN=1;SAF=6;SAP=7.35324;SAR=2;SRF=115;SRP=210.617;SRR=7;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:517:0:0:0,-4.51545,-46.8422 0/0:26:26,0:26:944:0:0:0,-7.82678,-85.2608 0/0:16:16,0:16:593:0:0:0,-4.81648,-53.7034 0/1:31:27,4:27:970:4:155:-4.99351,0,-78.2639 0/1:19:17,2:17:597:2:81:-1.96616,0,-48.328 0/1:23:21,2:21:781:2:81:-0.762044,0,-63.6819 dDocent_Contig_2543 21 . C A 253.614 . AB=0.122807;ABP=284.768;AC=3;AF=0.25;AN=12;AO=36;CIGAR=1X;DP=395;DPB=395;DPRA=6.38333;EPP=81.1833;EPPR=780.397;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.861111;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1396;QR=14388;RO=358;RPL=0;RPP=81.1833;RPPR=780.397;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=358;SRP=780.397;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:67:54,13:54:2130:13:512:-26.2551,0,-171.711 0/1:43:39,4:39:1581:4:153:-1.19366,0,-129.575 0/0:65:61,4:61:2469:4:162:0,-4.59999,-207.375 0/1:118:106,11:106:4271:11:416:-2.28158,0,-348.837 0/0:12:12,0:12:482:0:0:0,-3.61236,-43.73 0/0:90:86,4:86:3455:4:153:0,-12.9519,-296.842 dDocent_Contig_2544 7 . T G 125418 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=4514;CIGAR=1X;DP=4675;DPB=4675;DPRA=0;EPP=9805.04;EPPR=311.359;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998892;PAIREDR=0.992958;PAO=0;PQA=0;PQR=0;PRO=0;QA=141368;QR=1967;RO=142;RPL=0;RPP=9805.04;RPPR=311.359;RPR=4514;RUN=1;SAF=4514;SAP=9805.04;SAR=0;SRF=142;SRP=311.359;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:556:22,530:22:294:530:16753:-1480.73,-139.782,0 1/1:706:27,676:27:376:676:20895:-1845.99,-177.822,0 1/1:379:8,370:8:96:370:11692:-1043.3,-105.141,0 1/1:914:25,883:25:365:883:27728:-2461.59,-240.521,0 1/1:969:26,939:26:361:939:29298:-2603.21,-258.015,0 1/1:1151:34,1116:34:475:1116:35002:-3106.08,-303.407,0 dDocent_Contig_2545 41 . G A 286.572 . AB=0.115254;ABP=382.311;AC=1;AF=0.0833333;AN=12;AO=52;CIGAR=1X;DP=1488;DPB=1488;DPRA=0.633613;EPP=115.927;EPPR=3121.24;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.994429;PAO=0;PQA=0;PQR=0;PRO=0;QA=2008;QR=55164;RO=1436;RPL=0;RPP=115.927;RPPR=3121.24;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=1436;SRP=3121.24;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:185:182,3:182:6950:3:118:0,-44.6877,-614.352 0/0:238:226,12:226:8662:12:461:0,-29.8084,-737.446 0/0:139:137,2:137:5291:2:72:0,-35.0068,-469.313 0/0:274:273,1:273:10470:1:38:0,-78.6849,-938.052 0/1:295:261,34:261:10081:34:1319:-30.18,0,-818.053 0/0:357:357,0:357:13710:0:0:0,-107.468,-1233.18 dDocent_Contig_2546 26 . T C 455.604 . AB=0.176871;ABP=136.327;AC=2;AF=0.166667;AN=12;AO=28;CIGAR=1X;DP=447;DPB=447;DPRA=1.02262;EPP=63.8115;EPPR=908.514;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.971223;PAO=0;PQA=0;PQR=0;PRO=0;QA=1106;QR=15249;RO=417;RPL=0;RPP=63.8115;RPPR=908.514;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=417;SRP=908.514;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:79:76,2:76:2745:2:80:0,-16.0817,-239.758 0/0:70:70,0:70:2556:0:0:0,-21.0721,-230.254 0/0:61:61,0:61:2293:0:0:0,-18.3628,-206.589 0/0:90:89,0:89:3280:0:0:0,-26.7917,-295.269 0/1:61:49,12:49:1767:12:475:-24.7361,0,-140.921 0/1:86:72,14:72:2608:14:551:-24.0461,0,-209.043 dDocent_Contig_2547 21 . T A 139.138 . AB=0.0996885;ABP=449.813;AC=1;AF=0.0833333;AN=12;AO=34;CIGAR=1X;DP=1127;DPB=1127;DPRA=1.67101;EPP=76.8404;EPPR=2376.43;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.983532;PAO=0;PQA=0;PQR=0;PRO=0;QA=1322;QR=43335;RO=1093;RPL=0;RPP=76.8404;RPPR=2376.43;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=1093;SRP=2376.43;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:90:90,0:90:3576:0:0:0,-27.0927,-321.884 0/0:180:180,0:180:7169:0:0:0,-54.1854,-644.897 0/0:107:107,0:107:4257:0:0:0,-32.2102,-383.105 0/0:237:237,0:237:9379:0:0:0,-71.3441,-843.6 0/0:192:190,2:190:7508:2:80:0,-50.206,-667.802 0/1:321:289,32:289:11446:32:1242:-15.4367,0,-932.783 dDocent_Contig_2548 209 . N G 306.014 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=328;QR=0;RO=0;RPL=8;RPP=20.3821;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=20.3821;SAR=8;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 1/1:6:0,6:0:0:6:246:-22.5201,-1.80618,0 ./.:.:.:.:.:.:.:. dDocent_Contig_2549 42 . C T 9711.19 . AB=0.25563;ABP=855.223;AC=6;AF=0.5;AN=12;AO=420;CIGAR=1X;DP=1643;DPB=1643;DPRA=0;EPP=915.029;EPPR=2658.72;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.999182;PAO=0;PQA=0;PQR=0;PRO=0;QA=16402;QR=48541;RO=1223;RPL=0;RPP=915.029;RPPR=2658.72;RPR=420;RUN=1;SAF=420;SAP=915.029;SAR=0;SRF=1223;SRP=2658.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:254:187,67:187:7381:67:2626:-160.01,0,-587.472 0/1:392:265,127:265:10536:127:4995:-331.456,0,-829.548 0/1:217:158,59:158:6255:59:2319:-143.557,0,-497.391 0/1:436:361,75:361:14325:75:2912:-130.937,0,-1156.92 0/1:123:82,41:82:3264:41:1565:-104.054,0,-256.798 0/1:221:170,51:170:6780:51:1985:-112.326,0,-543.371 dDocent_Contig_2550 7 . G A 1111.92 . AB=0.150289;ABP=554.326;AC=3;AF=0.25;AN=12;AO=86;CIGAR=1X;DP=842;DPB=842;DPRA=1.44009;EPP=189.757;EPPR=1581.67;GTI=0;LEN=1;MEANALT=2;MQM=57.593;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.883721;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3286;QR=23071;RO=727;RPL=0;RPP=189.757;RPPR=1581.67;RPR=86;RUN=1;SAF=86;SAP=189.757;SAR=0;SRF=727;SRP=1581.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:99:94,0:94:2898:0:0:0,-28.2968,-260.84 0/1:162:143,15:143:4523:15:573:-3.79528,0,-359.493 0/0:106:95,8:95:3100:8:301:0,-4.27255,-252.257 0/0:118:114,0:114:3545:0:0:0,-34.3174,-319.098 0/1:140:109,25:109:3576:25:952:-44.9023,0,-281.523 0/1:217:172,38:172:5429:38:1460:-67.7154,0,-425.334 dDocent_Contig_2551 9 . A G 82781.6 . AB=0.0176887;ABP=1716.44;AC=9;AF=0.75;AN=12;AO=75;CIGAR=2M1X;DP=3757;DPB=3757;DPRA=0;EPP=165.871;EPPR=763.026;GTI=0;LEN=1;MEANALT=4.6;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.945714;PAO=0;PQA=0;PQR=0;PRO=0;QA=2875;QR=13299;RO=350;RPL=0;RPP=165.871;RPPR=763.026;RPR=75;RUN=1;SAF=75;SAP=165.871;SAR=0;SRF=350;SRP=763.026;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:399:83,295,16,4:83:3127:295,16,4:9446,424,152:-736.014,0,-167.507,-727.663,-222.989,-979.1,-748.533,-243.844,-971.45,-1003.58 0|1:681:69,572,36,0:69:2623:572,36,0:18181,1079,0:-1442.66,0,-42.9831,-1377.2,-128.963,-1581.49,-1463.43,-215.172,-1592.33,-1678.56 1|1:536:19,489,25,2:19:728:489,25,2:15585,743,78:-1336.58,-87.4234,0,-1282.98,-87.9257,-1335.21,-1335.89,-140.79,-1336.32,-1395.04 1|1:803:62,688,48,2:62:2355:688,48,2:22260,1508,71:-1790.73,-13.9454,0,-1688.19,-85.9278,-1866.87,-1803.61,-201.324,-1875.53,-1996.14 0|1:449:80,347,10,11:80:3047:347,10,11:11036,267,418:-864.284,0,-145.526,-867.351,-228.977,-1114.29,-854.085,-215.703,-1083.02,-1100.72 1|1:889:37,770,19,56:37:1419:770,19,56:24908,504,2156:-2113.11,-115.31,0,-2084.62,-192.176,-2195.37,-1947.23,-54.7464,-2024.07,-2046.84 dDocent_Contig_2552 90 . C A 222.448 . AB=0.285714;ABP=19.7617;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=245;DPB=245;DPRA=1.11207;EPP=42.0968;EPPR=495.935;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.713656;PAO=0;PQA=0;PQR=0;PRO=0;QA=597;QR=7708;RO=227;RPL=18;RPP=42.0968;RPPR=495.935;RPR=0;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=227;SRP=495.935;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:920:0:0:0,-8.12781,-83.1113 0/1:42:30,12:30:1031:12:401:-23.7677,0,-80.4562 0/0:34:32,2:32:1075:2:64:0,-4.15647,-90.9742 0/0:53:49,4:49:1672:4:132:0,-3.74859,-138.561 0/0:40:40,0:40:1384:0:0:0,-12.0412,-124.86 0/0:49:49,0:49:1626:0:0:0,-14.7505,-146.621 dDocent_Contig_2554 23 . C T 236.277 . AB=0.285714;ABP=8.59409;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X1M1X2M1X2M;DP=278;DPB=278;DPRA=0.323077;EPP=13.8677;EPPR=545.878;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=183;QR=9636;RO=250;RPL=0;RPP=13.8677;RPPR=545.878;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=250;SRP=545.878;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:25:24,1,0,0:24:909:1,0,0:37,0,0:0,-3.82792,-78.4199,-7.22472,-78.7209,-81.7476,-7.22472,-78.7209,-81.7476,-81.7476 0|0:28:26,0,1,0:26:1011:0,1,0:0,35,0:0,-7.82678,-90.9187,-5.0039,-88.0724,-87.7714,-7.82678,-90.9187,-88.0724,-90.9187 0|1:14:9,0,4,0:9:360:0,4,0:0,148,0:-9.37467,-12.0839,-41.7548,0,-29.6555,-28.4514,-12.0839,-41.7548,-29.6555,-41.7548 0|0:33:27,5,0,0:27:1053:5,0,0:192,0,0:-7.61989,0,-85.038,-15.7477,-86.5432,-102.303,-15.7477,-86.5432,-102.303,-102.303 0|0:105:101,4,0,0:101:3856:4,0,0:158,0,0:0,-17.0077,-332.526,-30.404,-333.73,-346.732,-30.404,-333.73,-346.732,-346.732 0|0:73:63,0,0,10:63:2447:0,0,10:0,0,372:-11.855,-30.8199,-231.893,-30.8199,-231.893,-231.893,0,-201.447,-201.447,-198.437 dDocent_Contig_2555 41 . C G 731.779 . AB=0.155063;ABP=329.583;AC=3;AF=0.25;AN=12;AO=80;CIGAR=1X;DP=738;DPB=738;DPRA=0;EPP=6.91895;EPPR=1271.57;GTI=0;LEN=1;MEANALT=1;MQM=59.9625;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.93617;PAO=0;PQA=0;PQR=0;PRO=0;QA=3144;QR=25824;RO=658;RPL=0;RPP=176.728;RPPR=1414.52;RPR=80;RUN=1;SAF=34;SAP=6.91895;SAR=46;SRF=641;SRP=1287.99;SRR=17;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:87:81,6:81:3213:6:238:0,-4.3955,-267.452 0/1:118:103,15:103:4027:15:590:-17.92,0,-326.905 0/1:106:88,18:88:3425:18:709:-32.2308,0,-276.4 0/0:170:156,14:156:6151:14:557:0,-0.701194,-502.912 0/0:165:154,11:154:6041:11:432:0,-10.4347,-504.265 0/1:92:76,16:76:2967:16:618:-28.2488,0,-239.443 dDocent_Contig_2556 9 . G A 893.823 . AB=0.156788;ABP=538.118;AC=1;AF=0.0833333;AN=12;AO=226;CIGAR=1X;DP=3270;DPB=3270;DPRA=0;EPP=493.763;EPPR=6608.63;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.99737;PAO=0;PQA=0;PQR=0;PRO=0;QA=7510;QR=105006;RO=3042;RPL=0;RPP=493.763;RPPR=6608.63;RPR=226;RUN=1;SAF=226;SAP=493.763;SAR=0;SRF=3042;SRP=6608.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:380:347,33:347:11719:33:1042:0,-20.3391,-960.448 0/0:513:497,16:497:16960:16:502:0,-108.954,-1480.43 0/0:549:522,27:522:18385:27:902:0,-83.7924,-1572.55 0/0:681:639,41:639:21919:41:1332:0,-84.9199,-1851.81 0/1:523:441,82:441:15198:82:2757:-90.9052,0,-1209.99 0/0:624:596,27:596:20825:27:975:0,-99.8514,-1785.45 dDocent_Contig_2558 37 . A T 54.4185 . AB=0.104651;ABP=119.765;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=447;DPB=447;DPRA=1.56897;EPP=33.4109;EPPR=941.086;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.142857;PAIREDR=0.724537;PAO=0;PQA=0;PQR=0;PRO=0;QA=525;QR=17121;RO=432;RPL=0;RPP=33.4109;RPPR=941.086;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=432;SRP=941.086;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:43:43,0:43:1717:0:0:0,-12.9443,-154.754 0/0:56:56,0:56:2229:0:0:0,-16.8577,-200.777 0/0:74:72,1:72:2880:1:41:0,-18.2901,-255.208 0/0:75:75,0:75:2951:0:0:0,-22.5772,-265.697 0/1:86:77,9:77:3044:9:361:-6.96473,0,-248.156 0/0:113:109,4:109:4300:4:123:0,-22.6477,-375.594 dDocent_Contig_2559 11 . T A 18280.4 . AB=0.0366399;ABP=2089.81;AC=0;AF=0;AN=12;AO=41;CIGAR=1X3M1X1M1X;DP=1119;DPB=1119;DPRA=0;EPP=92.0407;EPPR=261.416;GTI=0;LEN=1;MEANALT=6.16667;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1456;QR=4598;RO=119;RPL=0;RPP=92.0407;RPPR=261.416;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=119;SRP=261.416;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:105:18,1,37,47,0:18:688:1,37,47,0:40,1149,1477,0:-149.011,-151.133,-207.296,-62.205,-115.379,-107.537,-35.7132,-88.8913,0,-78.0391,-154.429,-207.598,-118.675,-92.1875,-210.893 0|0:280:38,8,87,127,7:38:1459:8,87,127,7:258,2762,3999,144:-412.537,-403.173,-520.536,-201.706,-300.679,-295.292,-102.471,-201.448,0,-184.02,-413.129,-512.097,-310.636,-211.407,-530.793 0|0:195:20,12,35,109,4:20:767:12,35,109,4:451,1104,3527,82:-304.235,-273.303,-332.65,-221.486,-247.493,-273.909,-25.7932,-51.8053,0,-55.9487,-304.083,-330.089,-278.273,-82.5915,-365.837 0|0:280:25,11,51,178,13:25:974:11,51,178,13:375,1601,5654,173:-496.106,-473.209,-549.961,-374.964,-424.606,-439.676,-48.5865,-98.2425,0,-75.084,-491.984,-541.625,-443.383,-117.037,-568.134 0|0:124:18,3,46,53,3:18:710:3,46,53,3:113,1453,1704,77:-190.289,-186.447,-243.975,-78.8535,-128.029,-123.443,-58.3816,-107.56,0,-100.866,-189.686,-238.856,-131.27,-110.801,-247.213 0|0:135:0,6,44,67,14:0:0:6,44,67,14:219,1471,2092,468:-287.085,-269.191,-267.385,-168.008,-150.112,-154.762,-119.073,-101.177,0,-98.9035,-249.211,-231.317,-130.132,-81.1997,-244.997 dDocent_Contig_2560 7 . G A 88.5238 . AB=0.0980392;ABP=360.877;AC=2;AF=0.166667;AN=12;AO=43;CIGAR=1X;DP=1145;DPB=1145;DPRA=1.38322;EPP=96.3836;EPPR=2304.77;GTI=0;LEN=1;MEANALT=2.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1635;QR=33869;RO=1060;RPL=0;RPP=96.3836;RPPR=2304.77;RPR=43;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=1060;SRP=2304.77;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:190:164,19:164:5118:19:719:-9.75201,0,-405.487 0/0:203:195,0:195:6287:0:0:0,-58.7008,-565.707 0/1:65:57,6:57:1713:6:234:-2.2863,0,-135.321 0/0:247:221,17:221:7265:17:647:0,-13.2846,-595.349 0/0:101:98,0:98:3100:0:0:0,-29.5009,-279.06 0/0:339:325,1:325:10386:1:35:0,-94.9727,-931.263 dDocent_Contig_2561 21 . T G 56.5664 . AB=0.112903;ABP=83.705;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=338;DPB=338;DPRA=0.742268;EPP=22.5536;EPPR=717.425;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.333333;PAIREDR=0.31307;PAO=0;PQA=0;PQR=0;PRO=0;QA=364;QR=11728;RO=329;RPL=0;RPP=22.5536;RPPR=717.425;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=329;SRP=717.425;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:46:45,1:45:1603:1:40:0,-9.8517,-140.545 0/1:62:55,7:55:1972:7:283:-7.17952,0,-159.065 0/0:36:35,1:35:1250:1:41:0,-6.74251,-108.699 0/0:86:86,0:86:3040:0:0:0,-25.8886,-273.798 0/0:35:35,0:35:1264:0:0:0,-10.536,-114.047 0/0:73:73,0:73:2599:0:0:0,-21.9752,-234.127 dDocent_Contig_2562 59 . T C 611.47 . AB=0.273684;ABP=45.274;AC=3;AF=0.25;AN=12;AO=26;CIGAR=1X;DP=183;DPB=183;DPRA=1.07955;EPP=59.4686;EPPR=343.931;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1043;QR=6131;RO=157;RPL=26;RPP=59.4686;RPPR=343.931;RPR=0;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=157;SRP=343.931;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:19,7:19:759:7:282:-17.9264,0,-60.8063 0/1:14:8,6:8:305:6:244:-18.1244,0,-23.5907 0/1:55:42,13:42:1644:13:517:-30.3181,0,-131.64 0/0:17:17,0:17:686:0:0:0,-5.11751,-62.0702 0/0:38:38,0:38:1454:0:0:0,-11.4391,-131.11 0/0:33:33,0:33:1283:0:0:0,-9.93399,-115.738 dDocent_Contig_2563 126 . T A 63.5554 . AB=0.121951;ABP=104.805;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=446;DPB=446;DPRA=1.10432;EPP=39.9253;EPPR=934.572;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990676;PAO=0;PQA=0;PQR=0;PRO=0;QA=606;QR=14677;RO=429;RPL=0;RPP=39.9253;RPPR=934.572;RPR=17;RUN=1;SAF=0;SAP=39.9253;SAR=17;SRF=0;SRP=934.572;SRR=429;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:51:51,0:51:1744:0:0:0,-15.3525,-157.246 0/0:123:120,3:120:4109:3:105:0,-27.2306,-360.218 0/0:46:45,1:45:1545:1:36:0,-10.2491,-135.744 0/1:82:72,10:72:2491:10:358:-7.87842,0,-199.767 0/0:56:53,3:53:1808:3:107:0,-6.87551,-153.019 0/0:88:88,0:88:2980:0:0:0,-26.4906,-268.445 dDocent_Contig_2564 7 . G T 973.972 . AB=0.165548;ABP=437.31;AC=4;AF=0.333333;AN=12;AO=85;CIGAR=1X;DP=815;DPB=815;DPRA=0;EPP=187.585;EPPR=1504.09;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.988235;PAIREDR=0.970793;PAO=0;PQA=0;PQR=0;PRO=0;QA=2786;QR=23048;RO=719;RPL=0;RPP=187.585;RPPR=1564.3;RPR=85;RUN=1;SAF=85;SAP=187.585;SAR=0;SRF=712;SRP=1504.09;SRR=7;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:77:57,20:57:1785:20:750:-44.6424,0,-137.705 0/1:132:104,27:104:3187:27:972:-47.9502,0,-247.186 0/1:109:95,14:95:3117:14:472:-9.97432,0,-247.896 0/1:129:115,13:115:3782:13:447:-1.88344,0,-301.879 0/0:165:156,6:156:4853:6:82:0,-41.4469,-429.328 0/0:203:192,5:192:6324:5:63:0,-53.7422,-563.27 dDocent_Contig_2565 50 . A G 620.082 . AB=0.165254;ABP=232.708;AC=3;AF=0.25;AN=12;AO=47;CIGAR=1X;DP=494;DPB=494;DPRA=0;EPP=105.07;EPPR=973.658;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.993289;PAO=0;PQA=0;PQR=0;PRO=0;QA=1847;QR=17693;RO=447;RPL=47;RPP=105.07;RPPR=973.658;RPR=0;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=447;SRP=973.658;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:57:36,21:36:1423:21:831:-57.9464,0,-111.165 0/1:77:69,8:69:2744:8:308:-4.89806,0,-223.896 0/0:64:61,3:61:2418:3:119:0,-8.17142,-206.676 0/1:102:92,10:92:3638:10:386:-4.38513,0,-296.735 0/0:76:73,3:73:2896:3:122:0,-11.5058,-249.377 0/0:118:116,2:116:4574:2:81:0,-27.8358,-403.922 dDocent_Contig_2566 9 . C T 576.421 . AB=0.175824;ABP=86.0751;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=2M1X;DP=182;DPB=182;DPRA=0.994536;EPP=37.7539;EPPR=302.673;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.75;PAIREDR=0.833333;PAO=0;PQA=0;PQR=0;PRO=0;QA=581;QR=4572;RO=138;RPL=0;RPP=37.7539;RPPR=302.673;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=138;SRP=302.673;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:28:26,0,1,0:26:897:0,1,0:0,39,0:0,-7.82678,-80.774,-4.48107,-77.5662,-77.2651,-7.82678,-80.774,-77.5662,-80.774 0|0:30:20,0,9,0:20:651:0,9,0:0,349,0:-22.9033,-28.9239,-81.4433,0,-52.7474,-50.0381,-28.9239,-81.4433,-52.7474,-81.4433 0|0:20:14,0,5,1:14:481:0,5,1:0,190,37:-11.3757,-15.5902,-54.6157,0,-39.0252,-37.52,-12.5648,-51.5879,-35.9964,-51.2868 0|1:42:32,0,4,6:32:1057:0,4,6:0,154,226:-8.88189,-18.5149,-103.927,-5.86689,-91.2775,-90.0733,0,-85.4011,-72.7503,-83.5949 0|1:29:14,2,3,9:14:505:2,3,9:58,117,318:-21.7031,-21.3074,-61.9237,-16.2864,-52.9034,-56.6131,0,-36.6337,-31.6193,-38.5354 0|0:33:32,0,1,0:32:981:0,1,0:0,35,0:0,-9.63296,-88.2102,-6.43536,-85.3612,-85.0602,-9.63296,-88.2102,-85.3612,-88.2102 dDocent_Contig_2567 7 . G A 2745.05 . AB=0.219551;ABP=429.301;AC=4;AF=0.333333;AN=12;AO=144;CIGAR=1X;DP=1530;DPB=1530;DPRA=0;EPP=315.702;EPPR=2901.93;GTI=0;LEN=1;MEANALT=2.33333;MQM=59.8125;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.979167;PAIREDR=0.997004;PAO=0;PQA=0;PQR=0;PRO=0;QA=5391;QR=42082;RO=1335;RPL=0;RPP=315.702;RPPR=2901.93;RPR=144;RUN=1;SAF=144;SAP=315.702;SAR=0;SRF=1335;SRP=2901.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:186:148,30:148:4630:30:1098:-45.3595,0,-363.121 0/1:103:71,30:71:2252:30:1143:-72.6382,0,-172.368 0/1:151:123,26:123:3664:26:981:-43.617,0,-284.949 0/1:184:126,51:126:3873:51:1926:-120.112,0,-295.267 0/0:399:378,5:378:11966:5:165:0,-100.458,-1061.76 0/0:507:489,2:489:15697:2:78:0,-140.765,-1405.14 dDocent_Contig_2568 7 . T G 139123 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=4925;CIGAR=1X;DP=5145;DPB=5145;DPRA=0;EPP=10697.5;EPPR=426.447;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=157415;QR=2774;RO=195;RPL=0;RPP=10697.5;RPPR=426.447;RPR=4925;RUN=1;SAF=4925;SAP=10697.5;SAR=0;SRF=195;SRP=426.447;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:790:41,746:41:533:746:23803:-2093.39,-188.997,0 1/1:910:37,866:37:515:866:27583:-2435.04,-225.475,0 1/1:595:22,572:22:326:572:18385:-1624.62,-149.436,0 1/1:943:24,918:24:415:918:29351:-2603.01,-246.431,0 1/1:963:42,914:42:600:914:29259:-2578.13,-233.788,0 1/1:944:29,909:29:385:909:29034:-2577.28,-247.747,0 dDocent_Contig_2569 23 . T A 24582.8 . AB=0.245963;ABP=2398.21;AC=6;AF=0.5;AN=12;AO=1051;CIGAR=1X;DP=4273;DPB=4273;DPRA=0;EPP=2285.23;EPPR=6995.15;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=59.9901;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997146;PAIREDR=0.971429;PAO=0;PQA=0;PQR=0;PRO=0;QA=41753;QR=128932;RO=3220;RPL=0;RPP=2285.23;RPPR=6995.15;RPR=1051;RUN=1;SAF=1051;SAP=2285.23;SAR=0;SRF=3220;SRP=6995.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:695:455,240:455:18163:240:9529:-647.842,0,-1423.97 0/1:664:445,219:445:17836:219:8693:-581.991,0,-1403.86 0/1:750:541,208:541:21689:208:8292:-520.013,0,-1724.29 0/1:835:628,207:628:25149:207:8219:-487.916,0,-2009.31 0/1:522:429,93:429:17138:93:3681:-174.183,0,-1383.9 0/1:807:722,84:722:28957:84:3339:-57.5561,0,-2360.44 dDocent_Contig_2570 71 . C T 68.9942 . AB=0.138462;ABP=76.807;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=228;DPB=228;DPRA=0.841176;EPP=26.8965;EPPR=474.22;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.818182;PAIREDR=0.907834;PAO=0;PQA=0;PQR=0;PRO=0;QA=395;QR=8288;RO=217;RPL=11;RPP=26.8965;RPPR=474.22;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=217;SRP=474.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:45:40,5:40:1501:5:179:-2.9131,0,-121.816 0/0:45:45,0:45:1698:0:0:0,-13.5463,-153.078 0/1:20:16,4:16:622:4:143:-7.19942,0,-50.2867 0/0:33:32,1:32:1222:1:34:0,-6.53508,-106.856 0/0:40:40,0:40:1512:0:0:0,-12.0412,-136.326 0/0:45:44,1:44:1733:1:39:0,-9.64978,-152.304 dDocent_Contig_2571 41 . C T 30.8872 . AB=0.0921986;ABP=206.682;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=812;DPB=812;DPRA=1.05067;EPP=31.2394;EPPR=1735.85;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998747;PAO=0;PQA=0;PQR=0;PRO=0;QA=519;QR=31838;RO=798;RPL=0;RPP=31.2394;RPPR=1735.85;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=798;SRP=1735.85;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:85:85,0:85:3379:0:0:0,-25.5875,-304.162 0/0:137:136,0:136:5390:0:0:0,-40.9401,-484.541 0/0:138:138,0:138:5496:0:0:0,-41.5421,-494.465 0/0:124:124,0:124:4949:0:0:0,-37.3277,-445.303 0/1:141:128,13:128:5151:13:519:-4.61124,0,-420.994 0/0:187:187,0:187:7473:0:0:0,-56.2926,-672.184 dDocent_Contig_2572 11 . T C 33506.1 . AB=0.310572;ABP=1376.88;AC=6;AF=0.5;AN=12;AO=1369;CIGAR=2M1X;DP=4408;DPB=4408;DPRA=0;EPP=2975.76;EPPR=6543.49;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997078;PAIREDR=0.999336;PAO=0;PQA=0;PQR=0;PRO=0;QA=52051;QR=107119;RO=3012;RPL=0;RPP=2975.76;RPPR=6543.49;RPR=1369;RUN=1;SAF=1369;SAP=2975.76;SAR=0;SRF=3012;SRP=6543.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:592:302,276:302:10694:276:10505:-770.589,0,-787.865 0|1:735:422,309:422:15141:309:11563:-819.714,0,-1141.76 0|1:572:349,222:349:12489:222:8547:-596.557,0,-951.313 0|1:981:606,375:606:21531:375:14384:-998.371,0,-1641.6 0|1:774:687,82:687:24325:82:3082:-45.6888,0,-1956.42 0|1:754:646,105:646:22939:105:3970:-130.917,0,-1837.13 dDocent_Contig_2573 40 . G A 145.59 . AB=0.125;ABP=169.128;AC=2;AF=0.166667;AN=12;AO=25;CIGAR=1X;DP=399;DPB=399;DPRA=2.86923;EPP=57.2971;EPPR=74.7387;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.941;NS=6;NUMALT=1;ODDS=0;PAIRED=0.68;PAIREDR=0.697051;PAO=0;PQA=0;PQR=0;PRO=0;QA=912;QR=13581;RO=373;RPL=0;RPP=57.2971;RPPR=812.97;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=242;SRP=74.7387;SRR=131;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:78:77,1:77:2822:1:6:0,-22.8803,-253.565 0/0:97:92,5:92:3258:5:190:0,-11.735,-275.895 0/1:70:59,11:59:2176:11:409:-16.0744,0,-175.003 0/1:66:60,6:60:2176:6:228:-1.01467,0,-176.205 0/0:26:25,0:25:938:0:0:0,-7.52575,-84.3566 0/0:62:60,2:60:2211:2:79:0,-11.1666,-191.708 dDocent_Contig_2574 58 . T A 2758.57 . AB=0.266284;ABP=250.675;AC=5;AF=0.416667;AN=12;AO=141;CIGAR=1X;DP=575;DPB=575;DPRA=0;EPP=309.188;EPPR=945.429;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.978723;PAIREDR=0.97235;PAO=0;PQA=0;PQR=0;PRO=0;QA=4966;QR=15296;RO=434;RPL=141;RPP=309.188;RPPR=945.429;RPR=0;RUN=1;SAF=141;SAP=309.188;SAR=0;SRF=434;SRP=945.429;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:53:51,2:51:1792:2:70:0,-9.30726,-154.911 0/1:101:90,11:90:3151:11:394:-5.39748,0,-253.414 0/1:48:41,7:41:1462:7:253:-8.67054,0,-117.425 0/1:163:117,46:117:4130:46:1599:-95.1285,0,-322.821 0/1:104:59,45:59:2094:45:1598:-112.803,0,-157.423 0/1:106:76,30:76:2667:30:1052:-63.079,0,-208.364 dDocent_Contig_2576 7 . A G 21634.3 . AB=0.78481;ABP=448.3;AC=8;AF=0.666667;AN=12;AO=795;CIGAR=1X1M1X;DP=943;DPB=943;DPRA=0;EPP=1729.33;EPPR=263.587;GTI=0;LEN=1;MEANALT=3.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997484;PAIREDR=0.958333;PAO=0;PQA=0;PQR=0;PRO=0;QA=26402;QR=4582;RO=120;RPL=0;RPP=1729.33;RPPR=263.587;RPR=795;RUN=1;SAF=795;SAP=1729.33;SAR=0;SRF=120;SRP=263.587;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:98:17,79:17:652:79:2674:-211.639,0,-29.7729 0|1:182:23,152:23:871:152:4964:-393.946,0,-25.7523 0|1:169:29,131:29:1112:131:4300:-338.695,0,-51.9052 0|1:183:45,134:45:1715:134:4516:-352.321,0,-100.359 1|1:143:6,135:6:232:135:4470:-381.219,-21.4915,0 1|1:168:0,164:0:0:164:5478:-492.837,-49.3689,0 dDocent_Contig_2577 47 . G T 36.9844 . AB=0.0854922;ABP=1731.19;AC=2;AF=0.166667;AN=12;AO=99;CIGAR=1X;DP=2678;DPB=2678;DPRA=1.52368;EPP=217.986;EPPR=5585.88;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999225;PAO=0;PQA=0;PQR=0;PRO=0;QA=3942;QR=101882;RO=2579;RPL=0;RPP=217.986;RPPR=5585.88;RPR=99;RUN=1;SAF=99;SAP=217.986;SAR=0;SRF=2579;SRP=5603.24;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:266:266,0:266:10536:0:0:0,-80.074,-947.579 0/0:372:372,0:372:14667:0:0:0,-111.983,-1318.96 0/0:440:440,0:440:17358:0:0:0,-132.453,-1560.88 0/0:442:442,0:442:17476:0:0:0,-133.055,-1571.47 0/1:541:494,47:494:19627:47:1865:-5.20412,0,-1601.95 0/1:617:565,52:565:22218:52:2077:-1.38219,0,-1812.09 dDocent_Contig_2578 7 . G A 429.571 . AB=0.151376;ABP=233.147;AC=3;AF=0.25;AN=12;AO=36;CIGAR=1X;DP=426;DPB=426;DPRA=0.98951;EPP=81.1833;EPPR=828.17;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1355;QR=11911;RO=380;RPL=0;RPP=81.1833;RPPR=828.17;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=380;SRP=828.17;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:47:39,6:39:1244:6:228:-7.16038,0,-98.5609 0/0:62:60,0:60:1877:0:0:0,-18.0618,-168.913 0/1:114:91,20:91:2956:20:754:-34.6285,0,-232.692 0/0:81:79,0:79:2509:0:0:0,-23.7814,-225.906 0/1:57:49,7:49:1465:7:256:-6.39002,0,-115.11 0/0:65:62,3:62:1860:3:117:0,-8.65657,-156.714 dDocent_Contig_2579 95 . T C 2817.54 . AB=0.414474;ABP=22.325;AC=6;AF=0.5;AN=12;AO=126;CIGAR=1X;DP=304;DPB=304;DPRA=0;EPP=276.616;EPPR=389.532;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.785714;PAIREDR=0.567416;PAO=0;PQA=0;PQR=0;PRO=0;QA=4251;QR=5994;RO=178;RPL=126;RPP=276.616;RPPR=389.532;RPR=0;RUN=1;SAF=126;SAP=276.616;SAR=0;SRF=178;SRP=389.532;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:45:36,9:36:1216:9:309:-14.5971,0,-96.1949 0/1:65:47,18:47:1547:18:615:-36.1058,0,-119.945 0/1:41:25,16:25:852:16:537:-36.3066,0,-64.6521 0/1:56:28,28:28:958:28:938:-67.8698,0,-69.6733 0/1:41:12,29:12:411:29:971:-75.3525,0,-24.977 0/1:56:30,26:30:1010:26:881:-62.7439,0,-74.3487 dDocent_Contig_2580 98 . N C 373.947 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=13;CIGAR=1X;DP=13;DPB=13;DPRA=0;EPP=31.2394;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=388;QR=0;RO=0;RPL=13;RPP=31.2394;RPPR=0;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:94:-8.77067,-0.90309,0 1/1:3:0,3:0:0:3:105:-9.79616,-0.90309,0 1/1:1:0,1:0:0:1:8:-0.799998,-0.30103,0 1/1:3:0,3:0:0:3:76:-7.09124,-0.90309,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 dDocent_Contig_2581 9 . C G 766.856 . AB=0.219512;ABP=143.097;AC=3;AF=0.25;AN=12;AO=49;CIGAR=1X;DP=302;DPB=302;DPRA=3.37179;EPP=109.412;EPPR=552.393;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1732;QR=8955;RO=253;RPL=0;RPP=109.412;RPPR=552.393;RPR=49;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=253;SRP=552.393;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:67:51,16:51:1817:16:567:-31.1832,0,-143.612 0/1:65:46,19:46:1639:19:675:-41.5035,0,-128.205 0/1:73:63,10:63:2191:10:343:-9.22078,0,-175.444 0/0:58:54,4:54:1927:4:147:0,-3.87044,-160.095 0/0:17:17,0:17:639:0:0:0,-5.11751,-57.8459 0/0:22:22,0:22:742:0:0:0,-6.62266,-67.0822 dDocent_Contig_2582 129 . C G 10746 . AB=0.858612;ABP=437.534;AC=8;AF=0.666667;AN=12;AO=354;CIGAR=1X;DP=409;DPB=409;DPRA=0;EPP=771.712;EPPR=122.441;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13307;QR=2066;RO=55;RPL=0;RPP=771.712;RPPR=122.441;RPR=354;RUN=1;SAF=0;SAP=771.712;SAR=354;SRF=0;SRP=122.441;SRR=55;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:78:18,60:18:684:60:2235:-177.889,0,-38.4111 0/1:66:7,59:7:273:59:2209:-179.16,0,-5.07003 0/1:101:13,88:13:488:88:3318:-268.353,0,-13.8571 0/1:144:17,127:17:621:127:4812:-389.767,0,-12.8722 1/1:9:0,9:0:0:9:327:-29.7689,-2.70927,0 1/1:11:0,11:0:0:11:406:-36.8806,-3.31133,0 dDocent_Contig_2583 7 . A G 25969 . AB=0.351432;ABP=705.656;AC=6;AF=0.5;AN=12;AO=1288;CIGAR=1X;DP=3665;DPB=3665;DPRA=0;EPP=2799.87;EPPR=5082.08;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999224;PAIREDR=0.999572;PAO=0;PQA=0;PQR=0;PRO=0;QA=41120;QR=88976;RO=2339;RPL=0;RPP=2799.87;RPPR=5082.08;RPR=1288;RUN=1;SAF=1288;SAP=2799.87;SAR=0;SRF=2339;SRP=5082.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:575:418,152:418:15902:152:4844:-264.309,0,-1258.72 0/1:814:572,236:572:21808:236:7722:-451.572,0,-1718.19 0/1:464:322,136:322:12305:136:4319:-250.825,0,-968.942 0/1:832:628,200:628:23838:200:6523:-337.659,0,-1894.69 0/1:396:158,229:158:5994:229:7080:-520.577,0,-422.763 0/1:584:241,335:241:9129:335:10632:-783.176,0,-647.79 dDocent_Contig_2584 7 . G A 10216.4 . AB=0.460772;ABP=13.7433;AC=4;AF=0.333333;AN=12;AO=376;CIGAR=1X;DP=1026;DPB=1026;DPRA=0;EPP=819.484;EPPR=1375.38;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998418;PAO=0;PQA=0;PQR=0;PRO=0;QA=14246;QR=19933;RO=632;RPL=0;RPP=819.484;RPPR=1375.38;RPR=376;RUN=1;SAF=376;SAP=819.484;SAR=0;SRF=632;SRP=1375.38;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:132:76,50:76:2417:50:1919:-134.863,0,-179.66 0/1:276:144,127:144:4521:127:4792:-349.6,0,-325.296 0/1:172:79,92:79:2434:92:3502:-263.717,0,-167.678 0/1:223:120,101:120:3945:101:3858:-280.686,0,-288.554 0/0:88:85,1:85:2548:1:11:0,-24.8986,-228.399 0/0:135:128,5:128:4068:5:164:0,-25.132,-351.237 dDocent_Contig_2585 27 . A T 1220.45 . AB=0.152174;ABP=631.416;AC=6;AF=0.5;AN=12;AO=91;CIGAR=1X;DP=598;DPB=598;DPRA=0;EPP=200.614;EPPR=1103.95;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.67033;PAIREDR=0.976331;PAO=0;PQA=0;PQR=0;PRO=0;QA=3456;QR=19300;RO=507;RPL=0;RPP=200.614;RPPR=1103.95;RPR=91;RUN=1;SAF=91;SAP=200.614;SAR=0;SRF=507;SRP=1103.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:83:65,18:65:2467:18:683:-36.8134,0,-197.238 0/1:162:145,17:145:5523:17:652:-10.2471,0,-448.26 0/1:59:51,8:51:1956:8:293:-8.95875,0,-158.508 0/1:147:123,24:123:4665:24:922:-39.0419,0,-375.631 0/1:52:37,15:37:1407:15:572:-36.1616,0,-111.248 0/1:95:86,9:86:3282:9:334:-1.80735,0,-266.9 dDocent_Contig_2586 27 . G A 13968.4 . AB=0.77492;ABP=207.178;AC=8;AF=0.666667;AN=12;AO=428;CIGAR=1X;DP=506;DPB=506;DPRA=0;EPP=932.4;EPPR=172.385;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=16946;QR=3109;RO=78;RPL=0;RPP=932.4;RPPR=172.385;RPR=428;RUN=1;SAF=428;SAP=932.4;SAR=0;SRF=78;SRP=172.385;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:71:2,69:2:82:69:2766:-241.276,-13.5935,0 1/1:124:6,118:6:240:118:4651:-396.546,-15.3523,0 0/1:88:11,77:11:444:77:3059:-248.907,0,-13.8247 0/1:92:8,84:8:308:84:3320:-271.169,0,-0.381686 0/1:38:15,23:15:601:23:929:-72.4741,0,-42.987 0/1:93:36,57:36:1434:57:2221:-172.069,0,-101.316 dDocent_Contig_2587 40 . T A 58017 . AB=0.522124;ABP=18.864;AC=6;AF=0.5;AN=12;AO=1947;CIGAR=1X;DP=3729;DPB=3729;DPRA=0;EPP=4230.87;EPPR=3855.22;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=77121;QR=68236;RO=1782;RPL=0;RPP=4230.87;RPPR=3855.22;RPR=1947;RUN=1;SAF=1947;SAP=4230.87;SAR=0;SRF=1782;SRP=3872.57;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:632:299,333:299:11327:333:13177:-994.741,0,-828.653 0/1:729:426,303:426:16223:303:12052:-864.395,0,-1239.68 0/1:509:295,214:295:11367:214:8394:-601.786,0,-869.232 0/1:679:402,277:402:15441:277:10932:-778.796,0,-1184.39 0/1:593:118,475:118:4569:475:18890:-1520.06,0,-232.695 0/1:587:242,345:242:9309:345:13676:-1053.15,0,-660.706 dDocent_Contig_2588 1 . N G 71.2068 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=75;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:75:-7.11959,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_2589 107 . N A 7073.67 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=321;CIGAR=1X4M;DP=342;DPB=342.2;DPRA=0;EPP=700.053;EPPR=0;GTI=0;LEN=1;MEANALT=2.5;MQM=40;MQMR=0;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0.5;PQA=2.5;PQR=2.5;PRO=0.5;QA=8009;QR=0;RO=0;RPL=0;RPP=700.053;RPPR=0;RPR=321;RUN=1;SAF=0;SAP=700.053;SAR=321;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:75:0,5,70:0:0:5,70:65,1784:-157.26,-152.928,-151.422,-21.0721,-16.6014,0 1|1:57:0,4,51:0:0:4,51:44,1199:-105.995,-103.249,-102.045,-15.3525,-12.5819,0 1|1:44:0,0,43:0:0:0,43:0,1153:-101.429,-101.429,-101.429,-12.9443,-12.9443,0 1|1:57:0,2,55:0:0:2,55:28,1375:-121.333,-119.42,-118.818,-16.5567,-14.5008,0 1|1:48:0,1,45:0:0:1,45:10,1105:-97.7415,-97.1456,-96.8446,-13.5464,-12.9377,0 1|1:61:0,3,57:0:0:3,57:34,1393:-122.83,-120.681,-119.778,-17.1587,-14.9712,0 dDocent_Contig_2590 14 . T G 51449.4 . AB=0.495369;ABP=3.67399;AC=6;AF=0.5;AN=12;AO=1765;CIGAR=1X;DP=3563;DPB=3563;DPRA=0;EPP=3835.66;EPPR=3896.46;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=69252;QR=70936;RO=1793;RPL=0;RPP=3835.66;RPPR=3896.46;RPR=1765;RUN=1;SAF=1765;SAP=3835.66;SAR=0;SRF=1793;SRP=3896.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:456:260,196:260:10286:196:7639:-549.914,0,-787.864 0/1:356:219,135:219:8677:135:5293:-369.317,0,-673.535 0/1:489:256,231:256:10056:231:9136:-674.774,0,-757.513 0/1:915:577,337:577:22831:337:13297:-920.274,0,-1777.39 0/1:633:156,477:156:6175:477:18733:-1494,0,-364.99 0/1:714:325,389:325:12911:389:15154:-1147.88,0,-946.169 dDocent_Contig_2591 48 . T G 63451.1 . AB=0.817803;ABP=633.761;AC=8;AF=0.666667;AN=12;AO=1836;CIGAR=1X;DP=1971;DPB=1971;DPRA=0;EPP=7.26809;EPPR=293.988;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.996187;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=73175;QR=5310;RO=134;RPL=948;RPP=7.26809;RPPR=293.988;RPR=888;RUN=1;SAF=1836;SAP=3989.83;SAR=0;SRF=134;SRP=293.988;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:229:40,189:40:1591:189:7491:-604.88,0,-74.4885 0/1:158:26,132:26:1035:132:5321:-431.153,0,-45.878 0/1:100:15,85:15:603:85:3386:-274.675,0,-24.5055 0/1:232:50,182:50:1959:182:7222:-579.815,0,-106.668 1/1:538:2,536:2:81:536:21386:-1915.23,-154.268,0 1/1:714:1,712:1:41:712:28369:-2546.58,-210.934,0 dDocent_Contig_2592 7 . G A 2709.21 . AB=0.55814;ABP=8.06024;AC=1;AF=0.0833333;AN=12;AO=98;CIGAR=1X;DP=553;DPB=553;DPRA=1.91053;EPP=215.815;EPPR=967.144;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3650;QR=14309;RO=444;RPL=0;RPP=215.815;RPPR=967.144;RPR=98;RUN=1;SAF=98;SAP=215.815;SAR=0;SRF=444;SRP=967.144;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:62:60,1:60:1865:1:19:0,-16.6129,-166.212 0/0:108:104,0:104:3414:0:0:0,-31.3071,-307.25 0/0:72:69,0:69:2238:0:0:0,-20.7711,-201.463 0/0:129:125,1:125:3893:1:30:0,-35.1827,-347.641 0/0:10:10,0:10:326:0:0:0,-3.0103,-29.6473 0/1:172:76,96:76:2573:96:3601:-272.443,0,-179.999 dDocent_Contig_2593 17 . C A 273.805 . AB=0.158333;ABP=124.685;AC=3;AF=0.25;AN=12;AO=25;CIGAR=1X;DP=284;DPB=284;DPRA=2.64;EPP=57.2971;EPPR=565.422;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.996139;PAO=0;PQA=0;PQR=0;PRO=0;QA=994;QR=10390;RO=259;RPL=0;RPP=57.2971;RPPR=565.422;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=259;SRP=565.422;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:28,3:28:1096:3:121:-1.94827,0,-89.5926 0/0:31:29,2:29:1161:2:81:0,-1.6462,-97.0786 0/0:113:109,4:109:4377:4:163:0,-18.958,-378.805 0/0:20:20,0:20:807:0:0:0,-6.0206,-72.9449 0/1:41:33,8:33:1338:8:306:-15.5533,0,-108.333 0/1:48:40,8:40:1611:8:323:-14.9891,0,-130.769 dDocent_Contig_2594 60 . T G 71.7581 . AB=0.119048;ABP=108.895;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=347;DPB=347;DPRA=0.730496;EPP=37.7539;EPPR=713.108;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.3125;PAIREDR=0.595166;PAO=0;PQA=0;PQR=0;PRO=0;QA=631;QR=13172;RO=331;RPL=16;RPP=37.7539;RPPR=721.768;RPR=0;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=330;SRP=713.108;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:39:35,4:35:1398:4:154:-2.49271,0,-114.326 0/1:45:39,6:39:1561:6:234:-7.88227,0,-127.179 0/0:75:70,5:70:2767:5:202:0,-4.01517,-230.584 0/0:47:46,1:46:1842:1:41:0,-10.0538,-161.888 0/0:39:39,0:39:1553:0:0:0,-11.7402,-140.009 0/0:102:102,0:102:4051:0:0:0,-30.7051,-364.562 dDocent_Contig_2595 47 . T G 254.426 . AB=0.09421;ABP=1460.45;AC=3;AF=0.25;AN=12;AO=117;CIGAR=1X;DP=1671;DPB=1671;DPRA=1.12619;EPP=257.073;EPPR=3360.13;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.974359;PAIREDR=0.996782;PAO=0;PQA=0;PQR=0;PRO=0;QA=4568;QR=62035;RO=1554;RPL=0;RPP=257.073;RPPR=3360.13;RPR=117;RUN=1;SAF=117;SAP=257.073;SAR=0;SRF=1554;SRP=3377.48;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:80:71,9:71:2802:9:352:-7.95271,0,-228.216 0/0:252:252,0:252:10038:0:0:0,-75.8596,-902.77 0/0:109:108,1:108:4304:1:41:0,-28.7177,-383.227 0/0:291:271,20:271:10813:20:787:0,-16.4488,-901.306 0/1:285:255,30:255:10171:30:1170:-19.7804,0,-828.946 0/1:654:597,57:597:23907:57:2218:-2.92274,0,-1952.65 dDocent_Contig_2596 123 . G A 36.2038 . AB=0.136364;ABP=28.2783;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=136;DPB=136;DPRA=0.964912;EPP=9.52472;EPPR=291.816;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.804511;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=5213;RO=133;RPL=0;RPP=9.52472;RPPR=291.816;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=291.816;SRR=133;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:19,3:19:752:3:123:-4.84213,0,-61.3797 0/0:24:24,0:24:945:0:0:0,-7.22472,-85.3491 0/0:15:15,0:15:582:0:0:0,-4.51545,-52.7078 0/0:15:15,0:15:569:0:0:0,-4.51545,-51.5415 0/0:33:33,0:33:1304:0:0:0,-9.93399,-117.625 0/0:27:27,0:27:1061:0:0:0,-8.12781,-95.7781 dDocent_Contig_2597 25 . T C 110.417 . AB=0.126316;ABP=118.235;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=244;DPB=244;DPRA=1.27517;EPP=29.068;EPPR=506.792;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.916667;PAIREDR=0.909483;PAO=0;PQA=0;PQR=0;PRO=0;QA=468;QR=9055;RO=232;RPL=0;RPP=29.068;RPPR=506.792;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=232;SRP=506.792;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:31,0:31:1223:0:0:0,-9.33193,-110.351 0/0:44:44,0:44:1728:0:0:0,-13.2453,-155.756 0/0:32:32,0:32:1260:0:0:0,-9.63296,-113.672 0/0:42:42,0:42:1590:0:0:0,-12.6433,-143.345 0/1:20:17,3:17:673:3:119:-5.07441,0,-54.8813 0/1:75:66,9:66:2581:9:349:-9.18903,0,-209.868 dDocent_Contig_2599 7 . T G 48662.8 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=1709;CIGAR=1X;DP=1774;DPB=1774;DPRA=0;EPP=3714.06;EPPR=128.956;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=54895;QR=818;RO=58;RPL=0;RPP=3714.06;RPPR=128.956;RPR=1709;RUN=1;SAF=1709;SAP=3714.06;SAR=0;SRF=58;SRP=128.956;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:324:15,309:15:229:309:9901:-870.198,-76.7715,0 1/1:371:11,359:11:141:359:11551:-1026.57,-98.867,0 1/1:313:12,299:12:174:299:9589:-847.097,-77.9649,0 1/1:310:9,299:9:115:299:9459:-840.708,-82.4591,0 1/1:129:2,126:2:22:126:4036:-361.284,-36.5518,0 1/1:327:9,317:9:137:317:10359:-919.648,-85.84,0 dDocent_Contig_2600 59 . T C 4088.51 . AB=0.489583;ABP=3.28173;AC=5;AF=0.416667;AN=12;AO=141;CIGAR=1X;DP=336;DPB=336;DPRA=1.2;EPP=309.188;EPPR=422.104;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5595;QR=7623;RO=193;RPL=141;RPP=309.188;RPPR=422.104;RPR=0;RUN=1;SAF=141;SAP=309.188;SAR=0;SRF=193;SRP=422.104;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:10,20:10:404:20:804:-63.6464,0,-27.6895 0/1:22:11,11:11:441:11:436:-32.9708,0,-33.4229 0/1:29:9,20:9:354:20:800:-63.5857,0,-23.4911 0/1:82:29,52:29:1151:52:2066:-161.351,0,-79.0882 0/1:125:86,38:86:3393:38:1489:-96.5194,0,-267.695 0/0:48:48,0:48:1880:0:0:0,-14.4494,-169.412 dDocent_Contig_2601 7 . T G 31929.8 . AB=0.858696;ABP=517.083;AC=10;AF=0.833333;AN=12;AO=1222;CIGAR=1X;DP=1358;DPB=1358;DPRA=0;EPP=2656.55;EPPR=289.645;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=39115;QR=4254;RO=132;RPL=0;RPP=2656.55;RPPR=289.645;RPR=1222;RUN=1;SAF=1222;SAP=2656.55;SAR=0;SRF=132;SRP=289.645;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:187:16,171:16:452:171:5343:-440.019,-15.3567,0 1/1:381:36,344:36:1219:344:11127:-891.272,-4.81028,0 1/1:171:9,160:9:253:160:5022:-429.017,-28.0932,0 0/1:318:38,279:38:1295:279:9014:-715.639,0,-21.2598 0/1:142:26,116:26:903:116:3665:-287.265,0,-38.8065 1/1:159:7,152:7:132:152:4944:-432.986,-35.8009,0 dDocent_Contig_2602 12 . G A 31456.8 . AB=0.661017;ABP=361.745;AC=6;AF=0.5;AN=12;AO=1053;CIGAR=1X;DP=1593;DPB=1593;DPRA=0;EPP=2289.57;EPPR=1173.43;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=40419;QR=20872;RO=539;RPL=0;RPP=2289.57;RPPR=1173.43;RPR=1053;RUN=1;SAF=1053;SAP=2289.57;SAR=0;SRF=539;SRP=1173.43;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:160:94,66:94:3678:66:2537:-180.334,0,-282.898 0/1:260:114,145:114:4405:145:5584:-424.114,0,-318.064 0/1:295:121,174:121:4669:174:6684:-512.56,0,-331.38 0/1:229:86,143:86:3305:143:5526:-428.328,0,-228.611 0/1:319:42,277:42:1629:277:10512:-849.541,0,-50.8164 0/1:330:82,248:82:3186:248:9576:-762.026,0,-187.495 dDocent_Contig_2603 87 . G C 2015.29 . AB=0.278515;ABP=163.647;AC=4;AF=0.333333;AN=12;AO=107;CIGAR=1X;DP=1168;DPB=1168;DPRA=0.44;EPP=235.358;EPPR=2306.94;GTI=0;LEN=1;MEANALT=1;MQM=57.1963;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.906542;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3677;QR=37200;RO=1061;RPL=107;RPP=235.358;RPPR=2306.94;RPR=0;RUN=1;SAF=107;SAP=235.358;SAR=0;SRF=1061;SRP=2306.94;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:27,3:27:960:3:105:-0.188597,0,-77.6863 0/1:121:87,34:87:3057:34:1164:-64.8,0,-238.939 0/1:50:37,13:37:1284:13:444:-25.2359,0,-100.807 0/1:176:121,55:121:4235:55:1894:-116.713,0,-328.354 0/0:365:365,0:365:12762:0:0:0,-109.876,-1148.44 0/0:426:424,2:424:14902:2:70:0,-121.591,-1334.3 dDocent_Contig_2604 41 . T C 133.233 . AB=0.0895522;ABP=885.374;AC=1;AF=0.0833333;AN=12;AO=55;CIGAR=1X;DP=3780;DPB=3780;DPRA=0.982249;EPP=122.441;EPPR=8076.55;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9962;NS=6;NUMALT=1;ODDS=0;PAIRED=0.272727;PAIREDR=0.287211;PAO=0;PQA=0;PQR=0;PRO=0;QA=2189;QR=148904;RO=3722;RPL=0;RPP=122.441;RPPR=8076.55;RPR=55;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=3722;SRP=8085.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:842:842,0:842:33661:0:0:0,-253.467,-3026.37 0/0:718:717,0:717:28640:0:0:0,-215.838,-2574.6 0/0:642:641,1:641:25696:1:9:0,-192.361,-2309.44 0/1:603:549,54:549:22010:54:2180:-14.8462,0,-1797.47 0/0:514:513,0:513:20477:0:0:0,-154.428,-1840.77 0/0:461:460,0:460:18420:0:0:0,-138.474,-1655.87 dDocent_Contig_2605 7 . G A 217.625 . AB=0.142857;ABP=150.36;AC=2;AF=0.166667;AN=12;AO=30;CIGAR=1X;DP=386;DPB=386;DPRA=1.31373;EPP=68.1545;EPPR=756.511;GTI=0;LEN=1;MEANALT=1.8;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.933333;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1112;QR=10782;RO=347;RPL=0;RPP=68.1545;RPPR=756.511;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=347;SRP=756.511;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:55:43,11:43:1327:11:406:-20.4033,0,-103.212 0/1:78:69,8:69:2156:8:306:-4.58091,0,-170.969 0/0:110:101,7:101:3075:7:273:0,-7.74537,-252.044 0/0:61:56,2:56:1792:2:49:0,-12.9983,-156.933 0/0:31:29,2:29:914:2:78:0,-1.92846,-75.1318 0/0:51:49,0:49:1518:0:0:0,-14.7505,-136.75 dDocent_Contig_2606 15 . T G 283.569 . AB=0.202899;ABP=55.9124;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=581;DPB=581;DPRA=0.934343;EPP=46.4397;EPPR=1216.86;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=801;QR=22353;RO=559;RPL=0;RPP=46.4397;RPPR=1216.86;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=559;SRP=1216.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:95:95,0:95:3822:0:0:0,-28.5978,-343.977 0/0:139:139,0:139:5554:0:0:0,-41.8432,-499.68 0/0:67:67,0:67:2661:0:0:0,-20.169,-239.602 0/0:95:95,0:95:3817:0:0:0,-28.5978,-343.524 0/0:116:108,6:108:4308:6:242:0,-12.557,-365.516 0/1:69:55,14:55:2191:14:559:-29.8798,0,-176.589 dDocent_Contig_2607 18 . G A 65.4182 . AB=0.133333;ABP=55.5599;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=195;DPB=195;DPRA=2.19355;EPP=18.2106;EPPR=411.247;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.989362;PAO=0;PQA=0;PQR=0;PRO=0;QA=274;QR=7528;RO=188;RPL=0;RPP=18.2106;RPPR=411.247;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=188;SRP=411.247;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:642:0:0:0,-4.81648,-58.1141 0/0:25:25,0:25:1008:0:0:0,-7.52575,-91.0125 0/0:24:24,0:24:957:0:0:0,-7.22472,-86.4283 0/0:28:28,0:28:1116:0:0:0,-8.42884,-100.72 0/1:45:39,6:39:1579:6:236:-8.0647,0,-128.795 0/0:57:56,1:56:2226:1:38:0,-13.3614,-196.709 dDocent_Contig_2608 56 . C T 473.315 . AB=0.276316;ABP=36.0395;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X;DP=405;DPB=405;DPRA=0.8;EPP=50.7827;EPPR=834.684;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=847;QR=14883;RO=383;RPL=22;RPP=50.7827;RPPR=834.684;RPR=0;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=383;SRP=834.684;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:89:89,0:89:3467:0:0:0,-26.7917,-312.109 0/0:104:103,1:103:4013:1:39:0,-27.4106,-357.32 0/0:60:60,0:60:2346:0:0:0,-18.0618,-211.33 0/0:76:76,0:76:2933:0:0:0,-22.8783,-264.118 0/1:30:26,4:26:1001:4:158:-5.569,0,-81.3627 0/1:46:29,17:29:1123:17:650:-44.9843,0,-87.5201 dDocent_Contig_2609 9 . T C 18127.6 . AB=0.299753;ABP=991.813;AC=5;AF=0.416667;AN=12;AO=865;CIGAR=1X;DP=3512;DPB=3512;DPRA=0;EPP=1881.33;EPPR=5746.55;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=30224;QR=84920;RO=2645;RPL=0;RPP=1881.33;RPPR=5746.55;RPR=865;RUN=1;SAF=865;SAP=1881.33;SAR=0;SRF=2645;SRP=5746.55;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:482:325,157:325:10438:157:5591:-358.113,0,-794.224 0/1:661:488,172:488:15654:172:5929:-334.839,0,-1209.76 0/1:457:351,106:351:11305:106:3789:-203.575,0,-879.737 0/1:641:389,252:389:12407:252:8747:-594.147,0,-923.473 0/0:673:658,14:658:21025:14:487:0,-158.261,-1847.64 0/1:598:434,164:434:14091:164:5681:-331.308,0,-1087.94 dDocent_Contig_2610 81 . A G 215.009 . AB=0.143791;ABP=171.633;AC=1;AF=0.0833333;AN=12;AO=37;CIGAR=1X;DP=759;DPB=759;DPRA=0;EPP=83.3548;EPPR=1564.3;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997218;PAO=0;PQA=0;PQR=0;PRO=0;QA=1231;QR=23545;RO=719;RPL=37;RPP=83.3548;RPPR=1564.3;RPR=0;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=719;SRP=1564.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:100:98,2:98:3137:2:55:0,-24.8793,-277.347 0/0:116:110,4:110:3692:4:140:0,-21.5491,-319.647 0/0:108:104,4:104:3460:4:110:0,-22.34,-301.457 0/0:154:149,4:149:4834:4:127:0,-34.617,-423.519 0/0:128:127,1:127:4191:1:35:0,-35.0332,-373.903 0/1:153:131,22:131:4231:22:764:-23.0238,0,-334.941 dDocent_Contig_2611 204 . C A 9156.48 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=5;CIGAR=1X3M1X;DP=482;DPB=490.6;DPRA=1.58333;EPP=13.8677;EPPR=272.273;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=173;QR=4313;RO=124;RPL=5;RPP=13.8677;RPPR=272.273;RPR=0;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=272.273;SRR=124;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:82:35,0,44:35:1225:0,44:0,1408:-102.931,-113.467,-213.144,0,-99.7149,-86.4696 0|0:87:31,0,56:31:1086:0,56:0,1847:-140.314,-149.646,-238.019,0,-88.7163,-71.8586 0|0:67:42,0,25:42:1434:0,25:0,810:-53.0351,-65.6784,-182.049,0,-116.701,-109.175 0|0:122:16,0,105:16:568:0,105:0,3446:-273.579,-278.396,-324.678,0,-46.2559,-14.6477 0|0:48:0,0,48:0:0:0,48:0,1562:-140.868,-140.868,-140.868,-14.4494,-14.4494,0 0|0:76:0,5,71:0:0:5,71:173,2358:-212.142,-198.082,-196.577,-21.3731,-6.96807,0 dDocent_Contig_2612 30 . G T 145.411 . AB=0.137255;ABP=61.2994;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=3X;DP=316;DPB=316;DPRA=1.49451;EPP=24.725;EPPR=632.737;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.962069;PAO=0;PQA=0;PQR=0;PRO=0;QA=362;QR=11252;RO=290;RPL=0;RPP=24.725;RPPR=632.737;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=290;SRP=632.737;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:34:33,0,1:33:1266:0,1:0,37:0,-9.93399,-113.847,-6.53719,-110.82,-110.519 0|0:97:91,1,5:91:3534:1,5:38,200:0,-24.2805,-314.325,-10.9035,-298.151,-299.763 0|0:57:57,0,0:57:2211:0,0:0,0:0,-17.1587,-199.175,-17.1587,-199.175,-199.175 0|0:56:54,2,0:54:2105:2,0:72,0:0,-10.0213,-182.815,-16.2556,-183.417,-189.29 0|0:21:17,0,4:17:657:0,4:0,162:-8.64533,-13.7628,-67.7041,0,-54.3423,-53.1382 0|1:51:38,7,6:38:1479:7,6:252,242:-9.09861,0,-119.409,-0.56997,-101.566,-120.317 dDocent_Contig_2613 57 . T A 4980.86 . AB=0.318885;ABP=187.068;AC=5;AF=0.416667;AN=12;AO=211;CIGAR=1X;DP=843;DPB=843;DPRA=0;EPP=461.191;EPPR=1373.21;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.981043;PAIREDR=0.982567;PAO=0;PQA=0;PQR=0;PRO=0;QA=7974;QR=23997;RO=631;RPL=211;RPP=461.191;RPPR=1373.21;RPR=0;RUN=1;SAF=211;SAP=461.191;SAR=0;SRF=631;SRP=1373.21;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:126:92,34:92:3499:34:1296:-78.9986,0,-277.108 0/1:194:112,82:112:4275:82:3091:-219.953,0,-326.421 0/1:85:61,24:61:2329:24:908:-56.4418,0,-184.233 0/1:151:95,55:95:3599:55:2068:-141.13,0,-278.821 0/1:90:79,11:79:2983:11:417:-10.7846,0,-241.54 0/0:197:192,5:192:7312:5:194:0,-41.4701,-640.098 dDocent_Contig_2614 89 . A G 2530.68 . AB=0.0419162;ABP=307.394;AC=0;AF=0;AN=12;AO=7;CIGAR=1X2M1X;DP=346;DPB=346;DPRA=0;EPP=18.2106;EPPR=456.848;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.732057;PAO=0;PQA=0;PQR=0;PRO=0;QA=236;QR=6892;RO=209;RPL=7;RPP=18.2106;RPPR=456.848;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=209;SRP=456.848;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:40:27,0,12:27:866:0,12:0,377:-22.1456,-30.2734,-100.064,0,-69.7603,-66.1479 0|0:67:49,0,15:49:1609:0,15:0,512:-26.802,-41.5525,-171.558,0,-130.007,-125.491 0|0:37:28,2,7:28:942:2,7:68,232:-10.3305,-13.2415,-88.9681,0,-70.8051,-74.2142 0|0:76:55,2,16:55:1821:2,16:65,541:-27.3088,-38.6202,-185.298,0,-142.041,-142.47 0|0:54:17,3,32:17:564:3,32:103,1090:-83.319,-80.0725,-124.794,0,-37.2582,-35.9906 0|0:72:33,0,38:33:1090:0,38:0,1286:-94.3841,-104.318,-192.452,0,-88.186,-76.7468 dDocent_Contig_2615 16 . C T 703.081 . AB=0.132678;ABP=479.993;AC=2;AF=0.166667;AN=12;AO=80;CIGAR=1X;DP=1170;DPB=1170;DPRA=1.3;EPP=176.728;EPPR=2369.92;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999083;PAO=0;PQA=0;PQR=0;PRO=0;QA=3226;QR=43135;RO=1090;RPL=0;RPP=176.728;RPPR=2369.92;RPR=80;RUN=1;SAF=80;SAP=176.728;SAR=0;SRF=1090;SRP=2369.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:199:173,26:173:6800:26:1043:-34.2555,0,-551.827 0/1:208:180,28:180:7159:28:1129:-39.2744,0,-581.372 0/0:202:187,15:187:7384:15:612:0,-5.39092,-608.796 0/0:236:225,11:225:8883:11:442:0,-30.9094,-758.849 0/0:178:178,0:178:7088:0:0:0,-53.5833,-637.598 0/0:147:147,0:147:5821:0:0:0,-44.2514,-523.71 dDocent_Contig_2616 11 . G T 562.436 . AB=0.146341;ABP=314.802;AC=1;AF=0.0833333;AN=12;AO=56;CIGAR=1X;DP=1156;DPB=1156;DPRA=1.37055;EPP=124.613;EPPR=2391.63;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999091;PAO=0;PQA=0;PQR=0;PRO=0;QA=2117;QR=40898;RO=1100;RPL=0;RPP=124.613;RPPR=2391.63;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=1100;SRP=2391.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:231:231,0:231:8654:0:0:0,-69.5379,-778.588 0/1:287:245,42:245:9057:42:1599:-57.7665,0,-728.45 0/0:184:183,1:183:6759:1:36:0,-51.7912,-604.574 0/0:231:221,10:221:8249:10:364:0,-36.4373,-709.059 0/0:78:78,0:78:2893:0:0:0,-23.4803,-260.52 0/0:145:142,3:142:5286:3:118:0,-32.6468,-464.711 dDocent_Contig_2617 7 . G A 108727 . AB=0.0913529;ABP=2083;AC=2;AF=0.166667;AN=12;AO=190;CIGAR=2X;DP=4329;DPB=4329;DPRA=0;EPP=415.59;EPPR=537.193;GTI=0;LEN=1;MEANALT=5.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7010;QR=8069;RO=246;RPL=0;RPP=415.59;RPPR=537.193;RPR=190;RUN=1;SAF=190;SAP=415.59;SAR=0;SRF=246;SRP=537.193;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:653:58,58,521:58:1918:58,521:2170,17653:-1436.25,-1276.02,-1413.64,-22.649,0,-20.8816 0|0:794:63,26,679:63:2084:26,679:982,22959:-1877.72,-1816.2,-1976.88,-35.8778,-123.9,0 0|0:618:38,28,540:38:1247:28,540:974,18573:-1558.48,-1490.75,-1583.06,-61.8098,-83.3692,0 1|0:781:38,73,633:38:1241:73,633:2740,21810:-1884.09,-1671.09,-1749.31,-124.29,0,-33.9333 0|0:857:37,3,788:37:1189:3,788:99,26921:-2314.65,-2317.79,-2412.7,-141.34,-229.207,0 0|0:626:12,2,593:12:390:2,593:45,20453:-1804.72,-1804.88,-1835.75,-147.006,-175.066,0 dDocent_Contig_2618 1 . N G 987.35 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=41;CIGAR=1X;DP=41;DPB=41;DPRA=0;EPP=92.0407;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=28;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0.487805;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1581;QR=0;RO=0;RPL=0;RPP=92.0407;RPPR=0;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:7:0,7:0:0:7:234:-18.1198,-2.10721,0 1/1:11:0,11:0:0:11:435:-27.6559,-3.31133,0 1/1:6:0,6:0:0:6:238:-12.3358,-1.80618,0 1/1:14:0,14:0:0:14:552:-31.4374,-4.21442,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:122:-8.40787,-0.90309,0 dDocent_Contig_2619 19 . G A 2271.03 . AB=0.159272;ABP=889.389;AC=5;AF=0.416667;AN=12;AO=156;CIGAR=1X;DP=1081;DPB=1081;DPRA=0;EPP=341.76;EPPR=2011.62;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.987179;PAIREDR=0.997838;PAO=0;PQA=0;PQR=0;PRO=0;QA=6193;QR=37025;RO=925;RPL=0;RPP=341.76;RPPR=2011.62;RPR=156;RUN=1;SAF=156;SAP=341.76;SAR=0;SRF=925;SRP=2011.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:154:126,28:126:5071:28:1121:-54.8151,0,-409.892 0/0:202:186,16:186:7446:16:643:0,-2.60555,-611.557 0/1:125:100,25:100:4025:25:990:-51.7723,0,-324.585 0/1:180:158,22:158:6256:22:867:-24.1482,0,-508.603 0/1:206:185,21:185:7440:21:844:-14.2614,0,-607.189 0/1:214:170,44:170:6787:44:1728:-91.3283,0,-546.101 dDocent_Contig_2620 23 . G T 495.378 . AB=0.122016;ABP=470.856;AC=1;AF=0.0833333;AN=12;AO=119;CIGAR=1X;DP=2591;DPB=2591;DPRA=0;EPP=261.416;EPPR=5370.89;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999595;PAO=0;PQA=0;PQR=0;PRO=0;QA=4778;QR=98400;RO=2472;RPL=0;RPP=261.416;RPPR=5370.89;RPR=119;RUN=1;SAF=119;SAP=261.416;SAR=0;SRF=2472;SRP=5370.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:445:421,24:421:16754:24:967:0,-46.63,-1419.21 0/1:377:331,46:331:13170:46:1826:-51.0607,0,-1070.85 0/0:376:371,5:371:14880:5:205:0,-94.3523,-1319.19 0/0:439:430,9:430:17031:9:369:0,-98.5767,-1497.88 0/0:429:415,14:415:16497:14:566:0,-77.8598,-1432.14 0/0:525:504,21:504:20068:21:845:0,-81.6777,-1728.07 dDocent_Contig_2621 8 . G A 486.899 . AB=0.145455;ABP=483.419;AC=3;AF=0.25;AN=12;AO=70;CIGAR=1X;DP=774;DPB=774;DPRA=1.09259;EPP=155.013;EPPR=1529.56;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2266;QR=24070;RO=703;RPL=0;RPP=155.013;RPPR=1529.56;RPR=70;RUN=1;SAF=70;SAP=155.013;SAR=0;SRF=703;SRP=1529.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:115:95,20:95:3261:20:607:-20.2904,0,-259.048 0/1:138:119,19:119:4107:19:622:-14.7384,0,-328.215 0/0:51:51,0:51:1720:0:0:0,-15.3525,-155.057 0/0:91:85,6:85:2855:6:205:0,-8.6132,-238.375 0/0:192:191,0:191:6537:0:0:0,-57.4967,-587.96 0/1:187:162,25:162:5590:25:832:-18.883,0,-446.856 dDocent_Contig_2622 86 . T A 915.655 . AB=0.270718;ABP=85.6582;AC=4;AF=0.333333;AN=12;AO=49;CIGAR=1X;DP=269;DPB=269;DPRA=1.02841;EPP=109.412;EPPR=480.734;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990909;PAO=0;PQA=0;PQR=0;PRO=0;QA=1685;QR=7385;RO=220;RPL=49;RPP=109.412;RPPR=480.734;RPR=0;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=220;SRP=480.734;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:568:0:0:0,-5.11751,-51.4368 0/1:36:12,24:12:416:24:825:-63.7299,0,-26.9357 0/1:16:14,2:14:450:2:69:-1.73618,0,-35.9916 0/1:24:13,11:13:446:11:383:-27.5803,0,-33.244 0/1:105:93,12:93:3121:12:408:-5.43941,0,-249.525 0/0:71:71,0:71:2384:0:0:0,-21.3731,-214.825 dDocent_Contig_2623 44 . A G 48.0569 . AB=0.137931;ABP=36.0317;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=234;DPB=234;DPRA=0.707317;EPP=11.6962;EPPR=502.449;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.804348;PAO=0;PQA=0;PQR=0;PRO=0;QA=163;QR=9156;RO=230;RPL=0;RPP=11.6962;RPPR=502.449;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=230;SRP=502.449;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:43:43,0:43:1719:0:0:0,-12.9443,-154.932 0/0:45:45,0:45:1796:0:0:0,-13.5463,-161.857 0/1:29:25,4:25:992:4:163:-6.32856,0,-80.8517 0/0:52:52,0:52:2058:0:0:0,-15.6536,-185.406 0/0:25:25,0:25:990:0:0:0,-7.52575,-89.3968 0/0:40:40,0:40:1601:0:0:0,-12.0412,-144.326 dDocent_Contig_2624 135 . G A 11593.6 . AB=0.117647;ABP=197.293;AC=0;AF=0;AN=12;AO=18;CIGAR=1X1M1X;DP=1350;DPB=1350;DPRA=0;EPP=42.0968;EPPR=1286.35;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=628;QR=21497;RO=591;RPL=0;RPP=42.0968;RPPR=1286.35;RPR=18;RUN=1;SAF=0;SAP=42.0968;SAR=18;SRF=0;SRP=1286.35;SRR=591;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:240:73,0,95,72:73:2686:0,95,72:0,3439,2612:-258.767,-280.743,-500.354,0,-219.612,-191.014,-67.4647,-287.076,-6.33669,-265.402 0|0:215:85,0,69,60:85:3057:0,69,60:0,2470,2201:-175.819,-201.407,-450.797,0,-249.387,-228.616,-21.4877,-270.88,-69.4693,-252.818 0|0:260:130,0,63,67:130:4709:0,63,67:0,2277,2483:-164.024,-203.158,-587.602,-17.3143,-401.755,-382.79,0,-384.446,-198.598,-364.277 0|0:315:175,0,59,80:175:6354:0,59,80:0,2116,2858:-180.316,-232.997,-751.858,-60.415,-579.277,-561.516,0,-518.861,-346.281,-494.779 0|0:153:49,18,10,76:49:1814:18,10,76:628,364,2740:-208.817,-172.492,-315.484,-193.834,-291.171,-339.236,0,-97.3452,-118.685,-125.539 0|0:167:79,0,17,71:79:2877:0,17,71:0,613,2535:-182.836,-206.617,-441.616,-156.594,-391.593,-386.476,0,-234.999,-184.976,-213.625 dDocent_Contig_2625 7 . T G 110380 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=3956;CIGAR=1X;DP=4119;DPB=4119;DPRA=0;EPP=8593.36;EPPR=313.531;GTI=0;LEN=1;MEANALT=2.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999747;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=124612;QR=1927;RO=143;RPL=0;RPP=8593.36;RPPR=313.531;RPR=3956;RUN=1;SAF=3956;SAP=8593.36;SAR=0;SRF=143;SRP=313.531;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:611:21,584:21:287:584:18281:-1618.87,-156.309,0 1/1:678:22,652:22:296:652:20310:-1800.57,-176.26,0 1/1:377:18,358:18:251:358:11289:-993.09,-90.57,0 1/1:803:27,774:27:319:774:24439:-2169.91,-212.408,0 1/1:754:26,725:26:372:725:22959:-2031.97,-192.565,0 1/1:896:29,863:29:402:863:27334:-2422.83,-232.315,0 dDocent_Contig_2626 29 . T C 45953.3 . AB=0.282362;ABP=1055.01;AC=4;AF=0.333333;AN=12;AO=722;CIGAR=2M1X2M1X;DP=2557;DPB=3331;DPRA=0;EPP=1570.81;EPPR=587.136;GTI=0;LEN=1;MEANALT=9.33333;MQM=59.8158;MQMR=60;NS=6;NUMALT=7;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=28704;QR=10506;RO=269;RPL=0;RPP=1570.81;RPPR=587.136;RPR=722;RUN=1;SAF=722;SAP=1570.81;SAR=0;SRF=269;SRP=587.136;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:340:30,6,66,36,81,78,5,18:30:1165:6,66,36,81,78,5,18:221,2595,1414,3220,3071,195,718:-412.984,-403.947,-497.86,-208.591,-286.241,-284.442,-305.732,-383.382,-188.026,-390.614,-156.914,-234.564,-39.2075,-136.349,-228.249,-169.383,-247.034,-51.6776,-148.819,0,-241.622,-405.988,-483.639,-288.283,-385.424,-236.606,-249.075,-500.202,-362.887,-440.537,-245.181,-342.322,-193.504,-205.974,-442.579,-453.187 1|0:405:17,22,148,5,93,44,45,15:17:657:22,148,5,93,44,45,15:835,5892,201,3668,1748,1749,609:-727.173,-663.837,-711.172,-247.825,-233.33,-257.23,-715.726,-701.23,-285.218,-768.178,-430.51,-416.015,0,-467.903,-456.471,-588.395,-573.9,-157.886,-625.788,-340.572,-629.107,-588.587,-574.092,-158.079,-625.98,-340.764,-498.65,-628.999,-682.063,-667.567,-251.554,-719.456,-434.239,-592.125,-592.317,-731.505 1|0:323:24,0,129,0,90,23,9,45:24:955:0,129,0,90,23,9,45:0,5103,0,3594,919,335,1825:-630.06,-637.285,-715.92,-217.375,-296.01,-257.177,-637.285,-715.92,-296.01,-715.92,-341.275,-419.91,0,-419.91,-392.817,-561.589,-640.224,-220.314,-640.224,-344.214,-633.3,-609.876,-688.511,-268.602,-688.511,-392.501,-612.815,-685.802,-486.78,-565.415,-145.505,-565.415,-269.404,-489.719,-538.006,-551.869 1|0:435:7,12,205,0,95,39,25,45:7:278:12,205,0,95,39,25,45:456,8165,0,3746,1541,1005,1820:-955.491,-920.208,-939.481,-285.303,-270.799,-246.477,-957.598,-943.093,-308.188,-980.483,-649.409,-634.905,0,-672.295,-643.697,-830.79,-816.285,-181.38,-853.675,-545.487,-841.935,-874.778,-860.273,-225.368,-897.663,-589.474,-770.855,-890.137,-807.544,-793.039,-158.133,-830.429,-522.24,-703.621,-747.608,-816.883 0|0:507:97,0,50,0,57,295,0,7:97:3787:0,50,0,57,295,0,7:0,1995,0,2261,11692,0,275:-933.153,-962.353,-1273.65,-798.064,-1109.36,-1094.3,-962.353,-1273.65,-1109.36,-1273.65,-776.238,-1087.53,-923.241,-1087.53,-1070.37,0,-311.291,-147,-311.291,-125.175,-222.487,-962.353,-1273.65,-1109.36,-1273.65,-1087.53,-311.291,-1273.65,-939.738,-1251.03,-1086.74,-1251.03,-1064.92,-288.676,-1251.03,-1248.92 1|0:547:94,0,124,0,58,267,0,0:94:3664:0,124,0,58,267,0,0:0,4954,0,2277,10561,0,0:-947.69,-975.987,-1277.13,-567.965,-869.105,-831.777,-975.987,-1277.13,-869.105,-1277.13,-788.726,-1089.87,-681.843,-1089.87,-1072.41,-106.886,-408.024,0,-408.024,-220.763,-327.649,-975.987,-1277.13,-869.105,-1277.13,-1089.87,-408.024,-1277.13,-975.987,-1277.13,-869.105,-1277.13,-1089.87,-408.024,-1277.13,-1277.13 dDocent_Contig_2627 13 . T C 6030.26 . AB=0.157377;ABP=2490.93;AC=4;AF=0.333333;AN=12;AO=397;CIGAR=1X;DP=4426;DPB=4426;DPRA=0;EPP=865.085;EPPR=8745.36;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999006;PAO=0;PQA=0;PQR=0;PRO=0;QA=15454;QR=150818;RO=4026;RPL=0;RPP=865.085;RPPR=8745.36;RPR=397;RUN=1;SAF=397;SAP=865.085;SAR=0;SRF=4026;SRP=8745.36;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:634:530,104:530:19987:104:4038:-172.607,0,-1606.92 0/1:692:581,111:581:21942:111:4305:-179.143,0,-1765.25 0/1:424:347,77:347:13005:77:3031:-145.267,0,-1042.26 0/1:690:598,92:598:22500:92:3565:-113.23,0,-1816.05 0/0:934:931,1:931:34605:1:37:0,-277.2,-3108.87 0/0:1052:1039,12:1039:38779:12:478:0,-273.291,-3444.43 dDocent_Contig_2629 38 . G A 569.263 . AB=0.173684;ABP=178.74;AC=3;AF=0.25;AN=12;AO=40;CIGAR=1X;DP=375;DPB=375;DPRA=0.557576;EPP=89.8692;EPPR=730.454;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1570;QR=13232;RO=335;RPL=0;RPP=89.8692;RPPR=730.454;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=335;SRP=730.454;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:34,3:34:1320:3:114:0,-0.508021,-108.44 0/1:69:54,15:54:2145:15:599:-33.477,0,-172.461 0/1:66:53,13:53:2044:13:513:-26.646,0,-164.283 0/0:49:45,4:45:1811:4:147:0,-1.16815,-149.616 0/1:55:50,5:50:1971:5:197:-1.54938,0,-161.032 0/0:99:99,0:99:3941:0:0:0,-29.802,-354.691 dDocent_Contig_2630 7 . T G 89038.3 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=3142;CIGAR=1X;DP=3273;DPB=3273;DPRA=0;EPP=6825.78;EPPR=246.215;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.650223;PAIREDR=0.633929;PAO=0;PQA=0;PQR=0;PRO=0;QA=100506;QR=1544;RO=112;RPL=0;RPP=6825.78;RPPR=246.215;RPR=3142;RUN=1;SAF=3142;SAP=6825.78;SAR=0;SRF=112;SRP=246.215;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:530:16,507:16:198:507:15978:-1419.65,-139.627,0 1/1:593:19,572:19:259:572:18380:-1630.2,-154.661,0 1/1:447:13,431:13:173:431:14030:-1246.65,-118.069,0 1/1:569:25,540:25:368:540:17222:-1516.24,-136.977,0 1/1:544:15,529:15:215:529:16947:-1505.27,-144.27,0 1/1:590:24,563:24:331:563:17949:-1584.97,-146.916,0 dDocent_Contig_2631 16 . A G 300.544 . AB=0.118881;ABP=363.839;AC=3;AF=0.25;AN=12;AO=39;CIGAR=1X;DP=504;DPB=504;DPRA=1.77647;EPP=87.6977;EPPR=1012.74;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.974359;PAIREDR=0.993548;PAO=0;PQA=0;PQR=0;PRO=0;QA=1518;QR=18542;RO=465;RPL=0;RPP=87.6977;RPPR=1012.74;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=465;SRP=1012.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:118:114,4:114:4568:4:154:0,-21.2892,-396.81 0/1:69:63,6:63:2508:6:236:-0.839603,0,-205.092 0/1:79:67,12:67:2686:12:463:-18.2281,0,-218.076 0/1:138:122,16:122:4846:16:625:-15.0431,0,-394.499 0/0:51:51,0:51:2024:0:0:0,-15.3525,-182.351 0/0:49:48,1:48:1910:1:40:0,-10.7548,-168.105 dDocent_Contig_2632 98 . N T 60.7946 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=64;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:64:-6.07837,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_2633 7 . A G 30534.1 . AB=0.852194;ABP=469.526;AC=10;AF=0.833333;AN=12;AO=1148;CIGAR=1X;DP=1278;DPB=1278;DPRA=0;EPP=2495.86;EPPR=198.443;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=36791;QR=3284;RO=90;RPL=0;RPP=2495.86;RPPR=198.443;RPR=1148;RUN=1;SAF=1148;SAP=2495.86;SAR=0;SRF=90;SRP=198.443;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:145:8,132:8:282:132:4301:-361.577,-16.6454,0 1/1:230:18,206:18:596:206:6672:-546.6,-13.6749,0 0/1:175:18,150:18:686:150:4703:-372.634,0,-11.2804 0/1:258:32,219:32:1183:219:6922:-547.252,0,-30.9953 1/1:215:14,197:14:537:197:6339:-521.912,-15.0132,0 1/1:255:0,244:0:0:244:7854:-706.653,-73.4513,0 dDocent_Contig_2634 12 . A G 3018.57 . AB=0.370968;ABP=47.8407;AC=5;AF=0.416667;AN=12;AO=118;CIGAR=1X1M;DP=363;DPB=363;DPRA=0;EPP=259.244;EPPR=506.792;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=0.949153;PAIREDR=0.939655;PAO=0;PQA=0;PQR=0;PRO=0;QA=4572;QR=9027;RO=232;RPL=0;RPP=259.244;RPPR=506.792;RPR=118;RUN=1;SAF=118;SAP=259.244;SAR=0;SRF=232;SRP=506.792;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:41:15,1,25:15:591:1,25:40,963:-74.5277,-75.7475,-124.069,0,-45.3181,-41.0878 0|1:68:30,6,32:30:1145:6,32:225,1228:-91.7604,-82.3669,-174.478,0,-75.4992,-84.2909 0|1:59:40,1,18:40:1545:1,18:41,703:-45.7325,-54.3886,-180.952,0,-123.46,-121.426 0|1:52:32,4,16:32:1247:4,16:136,609:-40.3455,-38.9611,-140.25,0,-91.5108,-97.7143 0|0:53:49,1,3:49:1924:1,3:40,119:0,-11.4546,-169.382,-4.95712,-159.887,-162.279 0|1:90:66,0,24:66:2575:0,24:0,950:-58.7129,-78.5808,-290.22,0,-212.033,-204.808 dDocent_Contig_2635 79 . C T 433.734 . AB=0.151852;ABP=287.264;AC=3;AF=0.25;AN=12;AO=47;CIGAR=1X;DP=471;DPB=471;DPRA=2.17614;EPP=105.07;EPPR=923.715;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997642;PAO=0;PQA=0;PQR=0;PRO=0;QA=1642;QR=14884;RO=424;RPL=47;RPP=105.07;RPPR=923.715;RPR=0;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=424;SRP=923.715;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:77:63,14:63:2220:14:488:-21.0704,0,-176.886 0/0:113:107,6:107:3738:6:210:0,-14.7743,-317.381 0/1:74:65,9:65:2305:9:315:-6.41228,0,-185.433 0/1:119:101,18:101:3510:18:629:-21.1126,0,-280.283 0/0:37:37,0:37:1308:0:0:0,-11.1381,-118.021 0/0:51:51,0:51:1803:0:0:0,-15.3525,-162.552 dDocent_Contig_2636 15 . T C 31674.9 . AB=0.827586;ABP=516.601;AC=9;AF=0.75;AN=12;AO=956;CIGAR=1X;DP=1071;DPB=1071;DPRA=0;EPP=2078.94;EPPR=248.387;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.998954;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=37912;QR=4421;RO=113;RPL=0;RPP=2078.94;RPPR=248.387;RPR=956;RUN=1;SAF=956;SAP=2078.94;SAR=0;SRF=113;SRP=248.387;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:169:6,163:6:245:163:6451:-557.918,-28.4446,0 0/1:120:21,98:21:829:98:3926:-317.117,0,-38.7062 0/1:240:54,185:54:2089:185:7330:-587.101,0,-115.935 0/1:191:18,173:18:715:173:6834:-557.291,0,-7.18118 1/1:161:2,159:2:77:159:6276:-557.328,-41.1567,0 1/1:190:12,178:12:466:178:7095:-595.952,-14.906,0 dDocent_Contig_2637 98 . N C 66.437 . AB=0;ABP=0;AC=4;AF=0.666667;AN=6;AO=3;CIGAR=1X;DP=4;DPB=4;DPRA=1.5;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=62;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:1:0,0:0:0:0:0:0,0,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:32:-3.03997,-0.60206,0 1/1:1:0,1:0:0:1:30:-2.99957,-0.30103,0 dDocent_Contig_2640 1 . N G 188.351 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=8.07091;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=205;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:205:-18.835,-1.50515,0 dDocent_Contig_2641 7 . G A 654.314 . AB=0.203488;ABP=134.359;AC=3;AF=0.25;AN=12;AO=51;CIGAR=1X;DP=437;DPB=437;DPRA=0;EPP=113.755;EPPR=782.939;GTI=0;LEN=1;MEANALT=2;MQM=59.0784;MQMR=57.096;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.980392;PAIREDR=0.906667;PAO=0;PQA=0;PQR=0;PRO=0;QA=1925;QR=12127;RO=375;RPL=0;RPP=113.755;RPPR=817.312;RPR=51;RUN=1;SAF=51;SAP=113.755;SAR=0;SRF=371;SRP=782.939;SRR=4;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:69:63,3:63:1981:3:113:0,-11.7913,-165.166 0/0:123:112,7:112:3592:7:250:0,-13.1821,-289.353 0/1:47:40,6:40:1210:6:228:-6.88825,0,-86.9098 0/0:73:65,6:65:2193:6:217:0,-1.6973,-176.903 0/1:60:41,18:41:1407:18:692:-44.7275,0,-104.978 0/1:65:54,11:54:1744:11:425:-19.0375,0,-134.899 dDocent_Contig_2642 107 . N G 113.608 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=111;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:43:-4.08396,-0.60206,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_2643 32 . G T 33.3073 . AB=0.0916667;ABP=176.8;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=884;DPB=884;DPRA=0.864198;EPP=37.7539;EPPR=1887.85;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997696;PAO=0;PQA=0;PQR=0;PRO=0;QA=651;QR=34368;RO=868;RPL=0;RPP=37.7539;RPPR=1887.85;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=868;SRP=1887.85;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:120:109,11:109:4272:11:448:-4.55238,0,-348.341 0/0:144:142,2:142:5580:2:82:0,-35.5686,-494.274 0/0:174:173,1:173:6843:1:40:0,-48.3835,-611.571 0/0:122:120,2:120:4763:2:81:0,-29.0399,-420.896 0/0:126:126,0:126:5016:0:0:0,-37.9298,-451.332 0/0:198:198,0:198:7894:0:0:0,-59.6039,-710.051 dDocent_Contig_2644 41 . G C 18936.9 . AB=0.363731;ABP=312.526;AC=5;AF=0.416667;AN=12;AO=714;CIGAR=1X;DP=2273;DPB=2273;DPRA=0;EPP=1553.44;EPPR=3386.16;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=28200;QR=60655;RO=1558;RPL=0;RPP=1553.44;RPPR=3386.16;RPR=714;RUN=1;SAF=714;SAP=1553.44;SAR=0;SRF=1558;SRP=3386.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:311:180,131:180:6954:131:5140:-368.871,0,-531.99 0/1:523:304,219:304:11783:219:8653:-620.875,0,-902.333 0/1:294:155,139:155:6063:139:5563:-411.992,0,-456.982 0/1:379:226,153:226:8858:153:5975:-423.476,0,-682.679 0/0:354:338,16:338:13121:16:632:0,-49.3503,-1122.87 0/1:412:355,56:355:13876:56:2237:-77.702,0,-1124.12 dDocent_Contig_2645 44 . G A 4712.59 . AB=0.5;ABP=3.0103;AC=11;AF=0.916667;AN=12;AO=134;CIGAR=1X;DP=136;DPB=136;DPRA=0;EPP=293.988;EPPR=7.35324;GTI=0;LEN=1;MEANALT=1;MQM=58.9627;MQMR=60;NS=6;NUMALT=1;ODDS=4.33681e-19;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5283;QR=69;RO=2;RPL=0;RPP=293.988;RPPR=7.35324;RPR=134;RUN=1;SAF=0;SAP=293.988;SAR=134;SRF=0;SRP=7.35324;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:34:0,34:0:0:34:1360:-122.658,-10.235,0 1/1:37:0,37:0:0:37:1456:-129.302,-11.1381,0 1/1:18:0,18:0:0:18:694:-62.7795,-5.41854,0 1/1:40:0,40:0:0:40:1595:-143.785,-12.0412,0 0/1:4:2,2:2:69:2:73:-4.73663,0,-5.34645 1/1:3:0,3:0:0:3:105:-9.21935,-0.90309,0 dDocent_Contig_2646 98 . N A 78.7158 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=2X;DP=3;DPB=4.5;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=78;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:46:-4.36947,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 dDocent_Contig_2647 98 . N G 1173.37 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=39;CIGAR=5X;DP=39;DPB=39;DPRA=0;EPP=87.6977;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0.461538;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1278;QR=0;RO=0;RPL=39;RPP=87.6977;RPPR=0;RPR=0;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:6:0,6:0:0:6:185:-16.9538,-1.80618,0 1|1:17:0,17:0:0:17:548:-49.6284,-5.11751,0 1|1:5:0,5:0:0:5:170:-15.6349,-1.50515,0 1|1:6:0,6:0:0:6:203:-18.6025,-1.80618,0 .:.:.:.:.:.:.:. 1|1:5:0,5:0:0:5:172:-15.8185,-1.50515,0 dDocent_Contig_2648 8 . G A 2534.2 . AB=0.261468;ABP=218.484;AC=5;AF=0.416667;AN=12;AO=114;CIGAR=1X;DP=502;DPB=502;DPRA=1.32121;EPP=250.558;EPPR=845.542;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.947368;PAIREDR=0.979381;PAO=0;PQA=0;PQR=0;PRO=0;QA=4359;QR=13524;RO=388;RPL=0;RPP=250.558;RPPR=845.542;RPR=114;RUN=1;SAF=114;SAP=250.558;SAR=0;SRF=388;SRP=845.542;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:66:66,0:66:2245:0:0:0,-19.868,-202.274 0/1:132:119,13:119:4232:13:503:-5.88272,0,-341.25 0/1:56:50,6:50:1770:6:214:-2.74725,0,-142.694 0/1:83:73,10:73:2547:10:372:-8.84051,0,-204.458 0/1:83:41,42:41:1469:42:1613:-120.451,0,-107.496 0/1:82:39,43:39:1261:43:1657:-124.708,0,-89.0781 dDocent_Contig_2649 7 . A G 2623.03 . AB=0.253669;ABP=254.414;AC=8;AF=0.666667;AN=12;AO=145;CIGAR=1X;DP=502;DPB=502;DPRA=0;EPP=317.874;EPPR=769.54;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4566;QR=13497;RO=353;RPL=0;RPP=317.874;RPPR=769.54;RPR=145;RUN=1;SAF=145;SAP=317.874;SAR=0;SRF=353;SRP=769.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:99:63,34:63:2390:34:1033:-63.8314,0,-185.919 0/1:195:152,43:152:5815:43:1407:-68.1883,0,-464.615 0/1:44:37,7:37:1417:7:229:-7.67608,0,-114.566 0/1:139:101,37:101:3875:37:1118:-59.2286,0,-307.2 1/1:13:0,13:0:0:13:419:-38.0121,-3.91339,0 1/1:12:0,11:0:0:11:360:-32.5884,-3.31133,0 dDocent_Contig_2650 7 . G A 190.811 . AB=0.117021;ABP=242.519;AC=1;AF=0.0833333;AN=12;AO=93;CIGAR=1X;DP=1310;DPB=1310;DPRA=2.11858;EPP=204.957;EPPR=2552.32;GTI=0;LEN=1;MEANALT=2.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999148;PAO=0;PQA=0;PQR=0;PRO=0;QA=3533;QR=37393;RO=1174;RPL=0;RPP=204.957;RPPR=2552.32;RPR=93;RUN=1;SAF=93;SAP=204.957;SAR=0;SRF=1174;SRP=2552.32;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:239:214,17:214:6992:17:616:0,-13.9879,-573.574 0/0:272:242,22:242:7548:22:851:0,-2.77233,-602.433 0/1:188:162,22:162:5050:22:843:-20.604,0,-399.015 0/0:380:343,24:343:11086:24:915:0,-28.0541,-914.927 0/0:118:105,8:105:3321:8:308:0,-6.15965,-271.063 0/0:113:108,0:108:3396:0:0:0,-32.5112,-305.651 dDocent_Contig_2651 10 . T A 6866.34 . AB=0.0445104;ABP=610.307;AC=0;AF=0;AN=12;AO=15;CIGAR=1X2M1X;DP=623;DPB=623;DPRA=0;EPP=35.5824;EPPR=693.539;GTI=0;LEN=1;MEANALT=5.33333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=579;QR=10790;RO=318;RPL=0;RPP=35.5824;RPPR=693.539;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=318;SRP=693.539;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:76:53,0,3,17:53:1702:0,3,17:0,116,659:-38.2586,-54.2132,-191.339,-44.6813,-181.808,-180.905,0,-137.181,-127.649,-132.063 0|0:104:68,1,1,31:68:2367:1,1,31:38,38,1187:-76.9942,-94.3476,-286.467,-94.3476,-283.651,-286.467,0,-189.345,-189.345,-183.13 0|0:111:49,7,2,51:49:1732:7,2,51:269,78,1958:-145.995,-138.661,-277.575,-154.333,-273.27,-294.753,0,-118.94,-134.615,-125.675 0|0:122:66,7,1,43:66:2257:7,1,43:272,39,1640:-114.691,-112.205,-293.231,-131.353,-292.132,-314.185,0,-160.784,-179.934,-170.196 0|0:113:35,0,3,71:35:1179:0,3,71:0,115,2667:-207.976,-218.512,-314.018,-209.073,-304.579,-303.676,0,-95.5291,-86.0866,-74.156 0|0:97:47,0,6,41:47:1553:0,6,41:0,232,1561:-113.941,-128.09,-253.615,-109.031,-234.556,-232.75,0,-125.553,-106.49,-113.211 dDocent_Contig_2652 9 . A C 97.7362 . AB=0.129412;ABP=104.405;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1X;DP=1174;DPB=1174;DPRA=0.800613;EPP=44.2683;EPPR=2508.89;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=684;QR=39733;RO=1154;RPL=0;RPP=44.2683;RPPR=2508.89;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=1154;SRP=2508.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:195:194,1:194:6681:1:37:0,-55.003,-597.588 0/0:204:204,0:204:6990:0:0:0,-61.4101,-629.069 0/1:85:74,11:74:2578:11:406:-11.2965,0,-206.64 0/0:242:235,7:235:8101:7:241:0,-50.8286,-706.985 0/0:288:287,0:287:9813:0:0:0,-86.3956,-882.658 0/0:160:160,0:160:5570:0:0:0,-48.1648,-501.346 dDocent_Contig_2653 98 . N G 110.957 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=107;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:41:-3.89396,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_2654 7 . G T 5540.33 . AB=0.327913;ABP=192.841;AC=6;AF=0.5;AN=12;AO=242;CIGAR=1X;DP=738;DPB=738;DPRA=0;EPP=528.507;EPPR=1069.2;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.958678;PAIREDR=0.940937;PAO=0;PQA=0;PQR=0;PRO=0;QA=8721;QR=15631;RO=491;RPL=0;RPP=528.507;RPPR=1069.2;RPR=242;RUN=1;SAF=242;SAP=528.507;SAR=0;SRF=491;SRP=1069.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:105:75,30:75:2369:30:1082:-66.0597,0,-181.807 0/1:140:59,80:59:1731:80:2963:-224.875,0,-114.057 0/1:72:38,34:38:1193:34:1268:-92.7261,0,-85.9588 0/1:138:99,38:99:3062:38:1373:-82.4782,0,-234.406 0/1:133:111,21:111:3700:21:650:-18.9167,0,-293.293 0/1:150:109,39:109:3576:39:1385:-80.1989,0,-277.284 dDocent_Contig_2655 9 . A T 888.993 . AB=0.300613;ABP=59.2954;AC=1;AF=0.0833333;AN=12;AO=74;CIGAR=1X;DP=1008;DPB=1008;DPRA=0.91573;EPP=163.699;EPPR=2031.17;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996788;PAO=0;PQA=0;PQR=0;PRO=0;QA=2275;QR=31013;RO=934;RPL=0;RPP=163.699;RPPR=2031.17;RPR=74;RUN=1;SAF=74;SAP=163.699;SAR=0;SRF=934;SRP=2031.17;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:138:138,0:138:4311:0:0:0,-41.5421,-388.13 0/0:167:154,13:154:5099:13:382:0,-15.6107,-424.344 0/0:100:91,9:91:3129:9:261:0,-6.33245,-258.032 0/1:163:114,49:114:3748:49:1547:-90.4222,0,-288.41 0/0:218:218,0:218:7205:0:0:0,-65.6245,-648.438 0/0:222:219,3:219:7521:3:85:0,-58.8969,-668.917 dDocent_Contig_2656 161 . G T 77.0727 . AB=0.16129;ABP=33.9012;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=204;DPB=204;DPRA=0.895954;EPP=13.8677;EPPR=435.133;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.4;PAIREDR=0.723618;PAO=0;PQA=0;PQR=0;PRO=0;QA=202;QR=7931;RO=199;RPL=5;RPP=13.8677;RPPR=435.133;RPR=0;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=435.133;SRR=199;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1207:0:0:0,-9.0309,-108.903 0/0:44:44,0:44:1748:0:0:0,-13.2453,-157.537 0/0:51:51,0:51:2052:0:0:0,-15.3525,-184.862 0/0:32:32,0:32:1281:0:0:0,-9.63296,-115.553 0/1:31:26,5:26:1007:5:202:-9.23015,0,-81.5775 0/0:16:16,0:16:636:0:0:0,-4.81648,-57.57 dDocent_Contig_2657 10 . T C 3411.18 . AB=0.139556;ABP=2445.01;AC=2;AF=0.166667;AN=12;AO=455;CIGAR=1X;DP=5955;DPB=5955;DPRA=1.00303;EPP=991.03;EPPR=11943.9;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997802;PAIREDR=0.996545;PAO=0;PQA=0;PQR=0;PRO=0;QA=16678;QR=201350;RO=5499;RPL=0;RPP=991.03;RPPR=11943.9;RPR=455;RUN=1;SAF=455;SAP=991.03;SAR=0;SRF=5499;SRP=11943.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:1041:874,167:874:32034:167:6073:-233.077,0,-2567.64 0/1:1123:988,135:988:36004:135:4993:-111.264,0,-2899.85 0/0:819:786,33:786:29002:33:1245:0,-134.225,-2495.95 0/0:1059:998,60:998:36867:60:2159:0,-124.092,-3120.99 0/0:990:990,0:990:36030:0:0:0,-298.02,-3240.29 0/0:923:863,60:863:31413:60:2208:0,-78.9466,-2626.22 dDocent_Contig_2658 7 . A G 21137 . AB=0.269948;ABP=2048.17;AC=6;AF=0.5;AN=12;AO=1201;CIGAR=1X;DP=4449;DPB=4449;DPRA=0;EPP=2610.95;EPPR=6956.06;GTI=0;LEN=1;MEANALT=2.5;MQM=59.9942;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998126;PAO=0;PQA=0;PQR=0;PRO=0;QA=38346;QR=121683;RO=3202;RPL=0;RPP=2610.95;RPPR=6956.06;RPR=1201;RUN=1;SAF=1201;SAP=2610.95;SAR=0;SRF=3202;SRP=6956.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:599:365,225:365:13870:225:6963:-448.895,0,-1069.93 0/1:778:507,263:507:19209:263:8393:-523.375,0,-1495.93 0/1:623:476,143:476:18152:143:4710:-237.497,0,-1446.27 0/1:742:438,291:438:16640:291:9265:-614.114,0,-1277.19 0/1:864:712,145:712:27033:145:4580:-154.137,0,-2173.31 0/1:843:704,134:704:26779:134:4435:-146.9,0,-2156.23 dDocent_Contig_2659 16 . A G 466.551 . AB=0.144068;ABP=262.704;AC=3;AF=0.25;AN=12;AO=42;CIGAR=1X;DP=404;DPB=404;DPRA=2.30556;EPP=94.2121;EPPR=789.083;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1663;QR=14518;RO=362;RPL=0;RPP=94.2121;RPPR=789.083;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=362;SRP=789.083;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:94:81,13:81:3248:13:520:-18.8496,0,-264.083 0/0:96:88,8:88:3560:8:309:0,-0.728921,-292.245 0/0:40:40,0:40:1592:0:0:0,-12.0412,-143.513 0/1:129:115,14:115:4595:14:551:-11.0972,0,-374.641 0/1:13:6,7:6:240:7:283:-21.93,0,-18.0623 0/0:32:32,0:32:1283:0:0:0,-9.63296,-115.735 dDocent_Contig_2661 55 . T C 1056.69 . AB=0.122573;ABP=1022.56;AC=3;AF=0.25;AN=12;AO=145;CIGAR=1X;DP=1828;DPB=1828;DPRA=0;EPP=317.874;EPPR=3640.23;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.999403;PAO=0;PQA=0;PQR=0;PRO=0;QA=5700;QR=64156;RO=1675;RPL=145;RPP=317.874;RPPR=3640.23;RPR=0;RUN=1;SAF=145;SAP=317.874;SAR=0;SRF=1675;SRP=3640.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:221:180,40:180:6891:40:1543:-72.4587,0,-553.358 0/1:288:248,34:248:9560:34:1348:-36.405,0,-774.793 0/0:354:332,22:332:12809:22:884:0,-26.6947,-1072.18 0/1:315:288,27:288:11066:27:1068:-1.58918,0,-900.543 0/0:322:305,17:305:11578:17:659:0,-37.2953,-981.765 0/0:328:322,5:322:12252:5:198:0,-80.6057,-1083.85 dDocent_Contig_2662 107 . N A 5527.18 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=178;CIGAR=1X;DP=178;DPB=178;DPRA=0;EPP=389.532;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.988764;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6112;QR=0;RO=0;RPL=0;RPP=389.532;RPPR=0;RPR=178;RUN=1;SAF=0;SAP=389.532;SAR=178;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:14:0,14:0:0:14:479:-43.437,-4.21442,0 1/1:39:0,39:0:0:39:1356:-122.341,-11.7402,0 1/1:30:0,30:0:0:30:1027:-92.7395,-9.0309,0 1/1:29:0,29:0:0:29:991:-89.5005,-8.72987,0 1/1:37:0,37:0:0:37:1264:-114.06,-11.1381,0 1/1:29:0,29:0:0:29:995:-89.8613,-8.72987,0 dDocent_Contig_2663 63 . C T 174.811 . AB=0.192982;ABP=49.6779;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=322;DPB=322;DPRA=1.28889;EPP=37.7539;EPPR=665.309;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996721;PAO=0;PQA=0;PQR=0;PRO=0;QA=569;QR=10898;RO=305;RPL=16;RPP=37.7539;RPPR=665.309;RPR=0;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=305;SRP=665.309;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:38,0:38:1370:0:0:0,-11.4391,-123.593 0/1:57:46,11:46:1644:11:398:-19.004,0,-131.08 0/0:60:58,2:58:2101:2:74:0,-11.0359,-182.328 0/0:54:52,1:52:1836:1:35:0,-12.6709,-162.13 0/0:52:52,0:52:1845:0:0:0,-15.6536,-166.32 0/0:61:59,2:59:2102:2:62:0,-12.4746,-183.549 dDocent_Contig_2666 15 . A G 5927.3 . AB=0.317614;ABP=211.33;AC=6;AF=0.5;AN=12;AO=229;CIGAR=1X;DP=721;DPB=721;DPRA=0;EPP=500.277;EPPR=1071.37;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.825328;PAIREDR=0.957317;PAO=0;PQA=0;PQR=0;PRO=0;QA=9106;QR=19388;RO=492;RPL=0;RPP=500.277;RPPR=1071.37;RPR=229;RUN=1;SAF=229;SAP=500.277;SAR=0;SRF=492;SRP=1071.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:82:58,24:58:2328:24:964:-62.3741,0,-184.99 0/1:116:89,27:89:3506:27:1056:-60.4094,0,-280.681 0/1:83:50,33:50:1983:33:1317:-93.8073,0,-153.679 0/1:165:123,42:123:4800:42:1672:-101.042,0,-382.261 0/1:111:70,41:70:2766:41:1618:-112.436,0,-215.641 0/1:164:102,62:102:4005:62:2479:-173.882,0,-311.099 dDocent_Contig_2667 182 . A G 18631.3 . AB=0.822064;ABP=509.342;AC=7;AF=0.583333;AN=12;AO=583;CIGAR=2X2M1D1M1X1M1X;DP=687;DPB=622.111;DPRA=0;EPP=1268.98;EPPR=220.158;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=22842;QR=3938;RO=100;RPL=583;RPP=1268.98;RPPR=220.158;RPR=0;RUN=1;SAF=0;SAP=1268.98;SAR=583;SRF=0;SRP=220.158;SRR=100;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:79:8,70:8:321:70:2761:-224.749,0,-5.37865 0|1:73:24,48:24:930:48:1885:-147.915,0,-62.045 0|1:40:7,32:7:280:32:1257:-101.55,0,-13.6856 0|1:170:35,135:35:1368:135:5309:-426.551,0,-72.2122 0|1:200:22,177:22:881:177:6938:-563.933,0,-19.3451 1|1:125:4,121:4:158:121:4692:-407.653,-23.0281,0 dDocent_Contig_2668 98 . N G 61.7773 . AB=0;ABP=0;AC=2;AF=0.5;AN=4;AO=2;CIGAR=1X;DP=3;DPB=3;DPRA=2;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=60;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 0/0:1:0,0:0:0:0:0:0,0,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:60:-5.6988,-0.60206,0 dDocent_Contig_2670 16 . C T 309.616 . AB=0.0978102;ABP=965.435;AC=2;AF=0.166667;AN=12;AO=130;CIGAR=1X;DP=2506;DPB=2506;DPRA=0;EPP=285.302;EPPR=5162.43;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.999579;PAO=0;PQA=0;PQR=0;PRO=0;QA=5176;QR=95002;RO=2376;RPL=0;RPP=285.302;RPPR=5162.43;RPR=130;RUN=1;SAF=130;SAP=285.302;SAR=0;SRF=2376;SRP=5162.43;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:407:385,22:385:15355:22:882:0,-42.8304,-1301.05 0/1:471:422,49:422:16990:49:1934:-32.472,0,-1385.89 0/1:214:196,18:196:7827:18:726:-1.24475,0,-639.574 0/0:393:364,29:364:14505:29:1147:0,-14.7933,-1200.84 0/0:497:490,7:490:19577:7:282:0,-123.859,-1734.53 0/0:524:519,5:519:20748:5:205:0,-138.905,-1846.71 dDocent_Contig_2671 16 . T A 131.259 . AB=0.0914634;ABP=716.26;AC=1;AF=0.0833333;AN=12;AO=112;CIGAR=1X;DP=2613;DPB=2613;DPRA=1.34615;EPP=246.215;EPPR=5394.78;GTI=0;LEN=1;MEANALT=1.8;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4404;QR=94589;RO=2483;RPL=0;RPP=246.215;RPPR=5394.78;RPR=112;RUN=1;SAF=112;SAP=246.215;SAR=0;SRF=2483;SRP=5394.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:266:238,22:238:8965:22:864:0,-0.569861,-728.49 0/0:510:487,22:487:18540:22:855:0,-76.3588,-1590.3 0/0:563:541,22:541:20680:22:860:0,-91.7742,-1782.26 0/1:492:447,45:447:17056:45:1806:-14.6486,0,-1385.99 0/0:338:338,0:338:12788:0:0:0,-101.748,-1150.36 0/0:444:432,1:432:16560:1:19:0,-128.652,-1487.43 dDocent_Contig_2672 23 . T C 4444.26 . AB=0.647321;ABP=45.2377;AC=6;AF=0.5;AN=12;AO=145;CIGAR=1X;DP=224;DPB=224;DPRA=0;EPP=317.874;EPPR=174.557;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.958621;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5792;QR=3167;RO=79;RPL=0;RPP=317.874;RPPR=174.557;RPR=145;RUN=1;SAF=145;SAP=317.874;SAR=0;SRF=79;SRP=174.557;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:17:11,6:11:440:6:236:-16.4943,0,-34.8383 0/1:21:8,13:8:327:13:521:-40.9153,0,-23.4785 0/1:55:13,42:13:518:42:1676:-134.512,0,-30.4106 0/1:29:11,18:11:447:18:727:-57.026,0,-31.8556 0/1:41:28,13:28:1111:13:529:-35.614,0,-87.9354 0/1:61:8,53:8:324:53:2103:-171.086,0,-11.166 dDocent_Contig_2673 7 . G A 79.4008 . AB=0.112245;ABP=130.994;AC=1;AF=0.0833333;AN=12;AO=34;CIGAR=1X;DP=1360;DPB=1360;DPRA=1.04201;EPP=76.8404;EPPR=2559.43;GTI=0;LEN=1;MEANALT=2.4;MQM=60;MQMR=59.9922;NS=6;NUMALT=1;ODDS=0;PAIRED=0.911765;PAIREDR=0.94622;PAO=0;PQA=0;PQR=0;PRO=0;QA=1281;QR=40379;RO=1283;RPL=0;RPP=76.8404;RPPR=2789.01;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=1256;SRP=2559.43;SRR=27;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:171:157,7:157:5043:7:259:0,-25.9613,-430.402 0/0:193:180,10:180:5752:10:364:0,-24.3423,-484.654 0/1:98:85,11:85:2552:11:424:-9.46296,0,-200.853 0/0:219:211,0:211:6725:0:0:0,-63.5173,-605.128 0/0:368:357,1:357:10971:1:39:0,-104.237,-983.547 0/0:311:293,5:293:9336:5:195:0,-72.1097,-822.374 dDocent_Contig_2674 19 . A T 46.7446 . AB=0.103896;ABP=107.946;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=431;DPB=431;DPRA=1.2379;EPP=33.4109;EPPR=908.514;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.997602;PAO=0;PQA=0;PQR=0;PRO=0;QA=557;QR=16352;RO=417;RPL=0;RPP=33.4109;RPPR=908.514;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=417;SRP=908.514;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:77:69,8:69:2694:8:319:-5.89577,0,-219.417 0/0:123:120,3:120:4640:3:116:0,-26.2104,-406.763 0/0:26:24,2:24:946:2:81:0,-0.141046,-77.754 0/0:81:80,1:80:3176:1:41:0,-20.2889,-281.827 0/0:65:65,0:65:2571:0:0:0,-19.5669,-231.538 0/0:59:59,0:59:2325:0:0:0,-17.7608,-209.424 dDocent_Contig_2675 7 . T G 97918.1 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=3472;CIGAR=1X;DP=3609;DPB=3609;DPRA=0;EPP=7542.36;EPPR=226.672;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.994816;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=110378;QR=1542;RO=103;RPL=0;RPP=7542.36;RPPR=226.672;RPR=3472;RUN=1;SAF=3472;SAP=7542.36;SAR=0;SRF=103;SRP=226.672;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:573:21,547:21:309:547:17356:-1533.57,-143.323,0 1/1:982:18,957:18:244:957:30825:-2751.01,-271.592,0 1/1:520:13,502:13:186:502:16097:-1431.39,-138.348,0 1/1:742:28,710:28:459:710:22327:-1967.24,-180.927,0 1/1:356:12,343:12:180:343:10686:-945.217,-90.703,0 1/1:436:11,413:11:164:413:13087:-1162.53,-112.977,0 dDocent_Contig_2676 57 . C A 220.079 . AB=0.111111;ABP=322.217;AC=1;AF=0.0833333;AN=12;AO=60;CIGAR=1X;DP=1334;DPB=1334;DPRA=0.723183;EPP=133.299;EPPR=2767.29;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.966667;PAIREDR=0.989002;PAO=0;PQA=0;PQR=0;PRO=0;QA=2366;QR=50265;RO=1273;RPL=60;RPP=133.299;RPPR=2767.29;RPR=0;RUN=1;SAF=60;SAP=133.299;SAR=0;SRF=1273;SRP=2767.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:200:187,13:187:7343:13:509:0,-14.0532,-614.387 0/0:271:255,15:255:10144:15:592:0,-28.0579,-858.702 0/0:120:118,2:118:4716:2:73:0,-29.1925,-417.417 0/1:243:216,27:216:8362:27:1071:-23.5308,0,-678.994 0/0:289:289,0:289:11449:0:0:0,-86.9977,-1029.63 0/0:211:208,3:208:8251:3:121:0,-52.2371,-730.865 dDocent_Contig_2678 15 . C T 206.955 . AB=0.0983982;ABP=615.202;AC=1;AF=0.0833333;AN=12;AO=44;CIGAR=1X;DP=1711;DPB=1711;DPRA=1.51335;EPP=98.5551;EPPR=3618.51;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999399;PAO=0;PQA=0;PQR=0;PRO=0;QA=1717;QR=66878;RO=1665;RPL=0;RPP=98.5551;RPPR=3618.51;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=1665;SRP=3618.51;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:282:282,0:282:11315:0:0:0,-84.8905,-1017.55 0/0:382:381,0:381:15320:0:0:0,-114.692,-1377.19 0/0:300:298,1:298:11969:1:11:0,-89.1628,-1075.09 0/1:437:394,43:394:15838:43:1706:-22.2183,0,-1292.6 0/0:220:220,0:220:8842:0:0:0,-66.2266,-795.245 0/0:90:90,0:90:3594:0:0:0,-27.0927,-323.492 dDocent_Contig_2679 43 . T C 1260.89 . AB=0.177378;ABP=354.694;AC=3;AF=0.25;AN=12;AO=107;CIGAR=1X;DP=993;DPB=993;DPRA=0;EPP=235.358;EPPR=1926.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.897196;PAIREDR=0.909707;PAO=0;PQA=0;PQR=0;PRO=0;QA=4254;QR=33719;RO=886;RPL=0;RPP=235.358;RPPR=1926.93;RPR=107;RUN=1;SAF=107;SAP=235.358;SAR=0;SRF=886;SRP=1926.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:179:169,10:169:6461:10:403:0,-17.2539,-544.721 0/0:216:205,11:205:7734:11:441:0,-24.9768,-655.804 0/1:131:118,13:118:4486:13:526:-8.25207,0,-364.319 0/0:209:192,17:192:7251:17:660:0,-3.1908,-592.672 0/1:103:79,24:79:3029:24:965:-56.1442,0,-241.744 0/1:155:123,32:123:4758:32:1259:-66.915,0,-381.555 dDocent_Contig_2680 14 . A T 9793.49 . AB=0.044898;ABP=443.766;AC=0;AF=0;AN=12;AO=11;CIGAR=1X2M1X13M;DP=751;DPB=825.647;DPRA=0;EPP=26.8965;EPPR=782.569;GTI=0;LEN=1;MEANALT=4.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.909091;PAIREDR=0.969359;PAO=0;PQA=0;PQR=0;PRO=0;QA=435;QR=14155;RO=359;RPL=0;RPP=26.8965;RPPR=782.569;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=359;SRP=782.569;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:136:79,8,34,14:79:3093:8,34,14:314,1328,527:-85.3838,-83.341,-335.253,0,-228.502,-244.09,-65.9975,-294.492,-211.156,-316.1 0|0:123:58,0,62,2:58:2289:0,62,2:0,2424,68:-181.894,-199.354,-387.703,0,-188.432,-169.768,-193.841,-382.19,-182.92,-381.588 0|0:109:43,3,60,1:43:1713:3,60,1:121,2322,41:-177.749,-180.718,-320.882,0,-131.082,-122.995,-187.309,-318.401,-137.672,-328.074 0|0:72:31,0,32,7:31:1214:0,32,7:0,1254,274:-93.8036,-103.135,-202.962,0,-99.8496,-90.2166,-80.6061,-180.434,-77.3201,-178.326 0|0:149:91,0,55,0:91:3596:0,55,0:0,2123,0:-147.016,-174.409,-470.334,0,-296.008,-279.451,-174.409,-470.334,-296.008,-470.334 0|0:162:57,0,103,0:57:2250:0,103,0:0,3925,0:-304.725,-321.883,-507.026,0,-185.133,-154.127,-321.883,-507.026,-185.133,-507.026 dDocent_Contig_2681 19 . C T 7036.9 . AB=0.52954;ABP=6.4742;AC=6;AF=0.5;AN=12;AO=242;CIGAR=1X4M;DP=457;DPB=457;DPRA=0;EPP=528.507;EPPR=452.505;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.966942;PAIREDR=0.951691;PAO=0;PQA=0;PQR=0;PRO=0;QA=9442;QR=8184;RO=207;RPL=0;RPP=528.507;RPPR=452.505;RPR=242;RUN=1;SAF=242;SAP=528.507;SAR=0;SRF=207;SRP=452.505;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:62:15,6,41:15:586:6,41:241,1582:-125.371,-110.025,-156.391,0,-28.301,-35.8212 0|1:67:43,0,24:43:1686:0,24:0,948:-65.4561,-78.4004,-217.044,0,-139.037,-131.813 0|1:85:29,1,55:29:1155:1,55:39,2162:-169.092,-174.616,-269.425,0,-91.9111,-78.5601 0|1:95:47,0,47:47:1857:0,47:0,1836:-136.783,-150.931,-303.741,0,-152.813,-138.664 0|1:44:20,0,24:20:794:0,24:0,905:-68.5007,-74.5213,-139.896,0,-65.7623,-58.5375 0|1:104:53,0,51:53:2106:0,51:0,2009:-149.71,-165.665,-339.052,0,-173.782,-158.43 dDocent_Contig_2682 7 . T G 117496 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=4172;CIGAR=1X;DP=4328;DPB=4328;DPRA=0;EPP=9062.39;EPPR=302.673;GTI=0;LEN=1;MEANALT=2.5;MQM=59.999;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.99976;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=132481;QR=1883;RO=138;RPL=0;RPP=9062.39;RPPR=302.673;RPR=4172;RUN=1;SAF=4172;SAP=9062.39;SAR=0;SRF=138;SRP=302.673;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:529:12,514:12:184:514:16207:-1441.52,-141.748,0 1/1:701:19,678:19:241:678:21302:-1894.71,-188.131,0 1/1:606:19,584:19:272:584:18447:-1635.08,-157.03,0 1/1:895:35,855:35:447:855:27521:-2435.56,-227.672,0 1/1:735:29,704:29:433:704:22248:-1962.51,-181.652,0 1/1:862:24,837:24:306:837:26756:-2379.43,-231.63,0 dDocent_Contig_2683 107 . N T 62.694 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=66;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:66:-6.26831,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_2684 16 . C A 3172.51 . AB=0.255597;ABP=281.105;AC=5;AF=0.416667;AN=12;AO=137;CIGAR=1X;DP=580;DPB=580;DPRA=2.43636;EPP=300.502;EPPR=960.63;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5402;QR=17150;RO=441;RPL=0;RPP=300.502;RPPR=960.63;RPR=137;RUN=1;SAF=137;SAP=300.502;SAR=0;SRF=441;SRP=960.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:79:58,21:58:2242:21:815:-49.8828,0,-178.185 0/1:158:119,39:119:4636:39:1563:-93.3432,0,-369.64 0/1:97:73,22:73:2786:22:874:-49.9746,0,-221.89 0/1:94:76,18:76:2966:18:724:-37.1876,0,-238.758 0/0:44:44,0:44:1725:0:0:0,-13.2453,-155.476 0/1:108:71,37:71:2795:37:1426:-96.0846,0,-219.169 dDocent_Contig_2685 98 . N C 1299.6 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=42;CIGAR=2X;DP=42;DPB=63.5;DPRA=0;EPP=94.2121;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=55.2857;MQMR=0;NS=1;NUMALT=1;ODDS=33.7174;PAIRED=0.0238095;PAIREDR=0;PAO=2;PQA=65;PQR=0;PRO=0;QA=1447;QR=0;RO=0;RPL=42;RPP=94.2121;RPPR=0;RPR=0;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:42:0,42:0:0:42:1447:-129.96,-12.6433,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_2688 7 . T G 82298.1 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=2891;CIGAR=1X;DP=3005;DPB=3005;DPRA=0;EPP=6280.74;EPPR=228.843;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998962;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=92884;QR=1413;RO=104;RPL=0;RPP=6280.74;RPPR=228.843;RPR=2891;RUN=1;SAF=2891;SAP=6280.74;SAR=0;SRF=104;SRP=228.843;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:477:14,458:14:190:458:14811:-1315.37,-124.979,0 1/1:553:24,528:24:316:528:16942:-1495.73,-137.709,0 1/1:300:10,290:10:146:290:9303:-823.86,-77.0232,0 1/1:501:16,485:16:263:485:15563:-1376.4,-126.985,0 1/1:637:25,610:25:319:610:19519:-1727.25,-162.465,0 1/1:537:15,520:15:179:520:16746:-1490.42,-144.933,0 dDocent_Contig_2689 56 . A G 3770.27 . AB=0.172908;ABP=1169.27;AC=2;AF=0.166667;AN=12;AO=306;CIGAR=1X;DP=4143;DPB=4143;DPRA=0;EPP=667.481;EPPR=8289.35;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11807;QR=150044;RO=3816;RPL=306;RPP=667.481;RPPR=8289.35;RPR=0;RUN=1;SAF=306;SAP=667.481;SAR=0;SRF=3816;SRP=8289.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:706:590,115:590:23138:115:4445:-187.654,0,-1868.25 0/0:765:714,50:714:28107:50:1909:0,-58.3746,-2355.3 0/1:549:447,102:447:17576:102:3976:-192.594,0,-1415.28 0/0:846:794,34:794:31132:34:1318:0,-130.76,-2680.38 0/0:552:549,2:549:21685:2:39:0,-162.275,-1946.27 0/0:725:722,3:722:28406:3:120:0,-207.059,-2543.01 dDocent_Contig_2690 7 . G A 4962.66 . AB=0.198012;ABP=1039.11;AC=4;AF=0.333333;AN=12;AO=266;CIGAR=1X;DP=1804;DPB=1804;DPRA=1.16667;EPP=580.622;EPPR=3205.93;GTI=0;LEN=1;MEANALT=2.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998644;PAO=0;PQA=0;PQR=0;PRO=0;QA=10055;QR=46871;RO=1475;RPL=0;RPP=580.622;RPPR=3205.93;RPR=266;RUN=1;SAF=266;SAP=580.622;SAR=0;SRF=1475;SRP=3205.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:332:193,129:193:6156:129:4916:-345.407,0,-457.035 0/1:393:334,44:334:10656:44:1644:-34.2178,0,-844.905 0/1:269:214,45:214:6848:45:1738:-78.5076,0,-538.198 0/1:314:263,41:263:8182:41:1520:-45.3556,0,-644.648 0/0:264:255,0:255:8153:0:0:0,-76.7626,-733.586 0/0:232:216,7:216:6876:7:237:0,-45.7279,-597.303 dDocent_Contig_2691 7 . T G 94716.7 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=3373;CIGAR=1X;DP=3491;DPB=3491;DPRA=0;EPP=7327.39;EPPR=235.358;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998814;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=106875;QR=1601;RO=107;RPL=0;RPP=7327.39;RPPR=235.358;RPR=3373;RUN=1;SAF=3373;SAP=7327.39;SAR=0;SRF=107;SRP=235.358;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:543:20,520:20:352:520:16529:-1455.32,-130.949,0 1/1:814:28,786:28:427:786:24770:-2189.96,-206.459,0 1/1:814:18,794:18:239:794:25164:-2242.27,-222.906,0 1/1:654:22,630:22:319:630:19713:-1744.75,-167.531,0 1/1:269:11,256:11:160:256:8200:-723.395,-65.9456,0 1/1:397:8,387:8:104:387:12499:-1115.2,-109.531,0 dDocent_Contig_2692 98 . N T 72.8398 . AB=0;ABP=0;AC=4;AF=0.666667;AN=6;AO=3;CIGAR=1X;DP=4;DPB=4;DPRA=1.5;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=69;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:25:-2.49986,-0.30103,0 ./.:.:.:.:.:.:.:. 0/0:1:0,0:0:0:0:0:0,0,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:44:-4.17981,-0.60206,0 dDocent_Contig_2693 22 . C T 3734.53 . AB=0.153992;ABP=1643.95;AC=3;AF=0.25;AN=12;AO=271;CIGAR=1X;DP=2429;DPB=2429;DPRA=0;EPP=591.479;EPPR=4593.83;GTI=0;LEN=1;MEANALT=1.66667;MQM=59.4465;MQMR=59.0177;NS=6;NUMALT=1;ODDS=0;PAIRED=0.00369004;PAIREDR=0.869302;PAO=0;PQA=0;PQR=0;PRO=0;QA=10577;QR=82884;RO=2150;RPL=0;RPP=591.479;RPPR=4671.68;RPR=271;RUN=1;SAF=271;SAP=591.479;SAR=0;SRF=2141;SRP=4593.83;SRR=9;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:197:192,5:192:7442:5:199:0,-41.0149,-648.814 0/0:280:265,15:265:10294:15:592:0,-30.6673,-866.405 0/1:276:248,27:248:9520:27:1057:-12.2191,0,-770.733 0/0:374:365,8:365:14054:8:317:0,-83.526,-1228.69 0/1:614:505,106:505:19529:106:4135:-187.886,0,-1567.74 0/1:688:575,110:575:22045:110:4277:-178.57,0,-1772.49 dDocent_Contig_2694 8 . C T 6865.56 . AB=0.367372;ABP=125.697;AC=5;AF=0.416667;AN=12;AO=295;CIGAR=1M1X3M;DP=803;DPB=803;DPRA=0;EPP=643.595;EPPR=975.83;GTI=0;LEN=1;MEANALT=4.33333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9805;QR=15865;RO=448;RPL=0;RPP=643.595;RPPR=975.83;RPR=295;RUN=1;SAF=295;SAP=643.595;SAR=0;SRF=448;SRP=975.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:114:51,0,58,0:51:1817:0,58,0:0,1982,0:-145.557,-160.909,-308.996,0,-148.186,-130.726,-160.909,-308.996,-148.186,-308.996 0|1:184:82,0,91,3:82:2900:0,91,3:0,3097,33:-226.565,-251.249,-487.408,0,-236.227,-208.833,-249.189,-485.345,-234.168,-484.442 0|1:143:95,0,38,2:95:3348:0,38,2:0,1300,30:-76.9678,-105.566,-378.122,0,-272.626,-261.187,-103.475,-376.027,-270.532,-375.425 0|1:223:117,0,93,1:117:4114:0,93,1:0,2889,11:-196.672,-231.892,-566.739,0,-334.854,-306.858,-231.205,-566.051,-334.167,-565.75 0|0:77:55,15,3,4:55:1979:15,3,4:579,105,52:-31.1047,0,-157.045,-39.1184,-153.02,-199.676,-44.2309,-158.099,-197.116,-204.452 0|1:62:48,0,12,1:48:1707:0,12,1:0,432,11:-20.9123,-35.3618,-174.456,0,-139.212,-135.6,-34.6905,-173.771,-138.528,-173.47 dDocent_Contig_2695 37 . T G 1751.88 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=57;CIGAR=1X;DP=57;DPB=57;DPRA=0;EPP=126.784;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=3.38813e-21;PAIRED=0.754386;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1916;QR=0;RO=0;RPL=0;RPP=126.784;RPPR=0;RPR=57;RUN=1;SAF=0;SAP=126.784;SAR=57;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:9:0,9:0:0:9:291:-26.5049,-2.70927,0 1/1:14:0,14:0:0:14:459:-41.6244,-4.21442,0 1/1:14:0,14:0:0:14:468:-42.4386,-4.21442,0 1/1:14:0,14:0:0:14:490:-44.4326,-4.21442,0 1/1:5:0,5:0:0:5:173:-15.9102,-1.50515,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_2696 98 . N G 75.9647 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=76;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 dDocent_Contig_2697 30 . T A 121527 . AB=0.656496;ABP=1271.93;AC=6;AF=0.5;AN=12;AO=3916;CIGAR=1X;DP=5965;DPB=5965;DPRA=0;EPP=8506.5;EPPR=4439.33;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=155249;QR=81462;RO=2043;RPL=0;RPP=8506.5;RPPR=4439.33;RPR=3916;RUN=1;SAF=3916;SAP=8506.5;SAR=0;SRF=2043;SRP=4439.33;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:691:257,433:257:10268:433:17145:-1333.96,0,-715.66 0/1:832:286,545:286:11426:545:21649:-1696.06,0,-776.974 0/1:693:252,441:252:10089:441:17548:-1369.3,0,-698.726 0/1:1215:532,682:532:21194:682:26951:-2057.74,0,-1540.08 0/1:1069:225,843:225:8958:843:33414:-2682.34,0,-483.779 0/1:1465:491,972:491:19527:972:38542:-3024.52,0,-1315 dDocent_Contig_2698 8 . C T 1592.86 . AB=0.198347;ABP=481.183;AC=2;AF=0.166667;AN=12;AO=147;CIGAR=1X1M1X;DP=1948;DPB=1948;DPRA=0.932558;EPP=322.217;EPPR=3913.83;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99889;PAO=0;PQA=0;PQR=0;PRO=0;QA=4642;QR=63142;RO=1801;RPL=0;RPP=322.217;RPPR=3913.83;RPR=147;RUN=1;SAF=147;SAP=322.217;SAR=0;SRF=1801;SRP=3913.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:263:250,13:250:8703:13:393:0,-43.5121,-747.486 0|1:280:243,37:243:8654:37:1143:-18.848,0,-694.427 0|0:221:210,11:210:7254:11:320:0,-37.4498,-623.726 0|1:325:242,83:242:8584:83:2681:-143.66,0,-674.573 0|0:344:344,0:344:12012:0:0:0,-103.554,-1080.75 0|0:515:512,3:512:17935:3:105:0,-145.236,-1603.71 dDocent_Contig_2699 7 . T G 78943.4 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=2781;CIGAR=1X;DP=2877;DPB=2877;DPRA=0;EPP=6041.88;EPPR=196.271;GTI=0;LEN=1;MEANALT=2;MQM=59.9356;MQMR=59.4719;NS=6;NUMALT=1;ODDS=0;PAIRED=0.992449;PAIREDR=0.977528;PAO=0;PQA=0;PQR=0;PRO=0;QA=89066;QR=1300;RO=89;RPL=0;RPP=6041.88;RPPR=196.271;RPR=2781;RUN=1;SAF=2781;SAP=6041.88;SAR=0;SRF=89;SRP=196.271;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:479:10,468:10:130:468:15067:-1341.84,-132.174,0 1/1:534:16,517:16:204:517:16601:-1475.14,-142.073,0 1/1:251:7,244:7:114:244:7717:-683.845,-65.1365,0 1/1:572:14,557:14:231:557:17757:-1576.9,-151.233,0 1/1:423:18,402:18:290:402:12814:-1126.48,-100.312,0 1/1:618:24,593:24:331:593:19110:-1689.37,-155.92,0 dDocent_Contig_2700 55 . G A 8347.61 . AB=0.205384;ABP=1515.38;AC=4;AF=0.333333;AN=12;AO=499;CIGAR=1X;DP=3214;DPB=3214;DPRA=0;EPP=1086.58;EPPR=5892.04;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999263;PAO=0;PQA=0;PQR=0;PRO=0;QA=19480;QR=104165;RO=2712;RPL=499;RPP=1086.58;RPPR=5892.04;RPR=0;RUN=1;SAF=499;SAP=1086.58;SAR=0;SRF=2712;SRP=5892.04;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:422:348,74:348:13327:74:2877:-132.021,0,-1071.69 0/1:478:374,104:374:14267:104:4104:-225.451,0,-1139.36 0/1:395:307,88:307:11893:88:3382:-185.527,0,-950.75 0/1:711:565,146:565:21671:146:5702:-298.984,0,-1734.91 0/0:488:454,33:454:17357:33:1267:0,-32.3774,-1446.76 0/0:720:664,54:664:25650:54:2148:0,-22.8931,-2113.22 dDocent_Contig_2701 7 . T G 165088 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=5800;CIGAR=1X;DP=5995;DPB=5995;DPRA=0;EPP=12597.6;EPPR=367.818;GTI=0;LEN=1;MEANALT=3;MQM=59.9988;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.99931;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=185810;QR=2302;RO=168;RPL=0;RPP=12597.6;RPPR=367.818;RPR=5800;RUN=1;SAF=5800;SAP=12597.6;SAR=0;SRF=168;SRP=367.818;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:760:20,735:20:272:735:23454:-2085.45,-202.884,0 1/1:830:22,803:22:316:803:25753:-2288.27,-219.955,0 1/1:774:23,747:23:325:747:24072:-2136.28,-202.537,0 1/1:1101:32,1064:32:460:1064:34592:-3070.37,-288.548,0 1/1:1185:38,1144:38:494:1144:36243:-3215.87,-311.47,0 1/1:1345:33,1307:33:435:1307:41696:-3711.7,-364.281,0 dDocent_Contig_2702 8 . C T 59.8972 . AB=0.134328;ABP=80.8268;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=301;DPB=301;DPRA=1.9802;EPP=35.5824;EPPR=624.051;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.866667;PAIREDR=0.993007;PAO=0;PQA=0;PQR=0;PRO=0;QA=510;QR=10003;RO=286;RPL=0;RPP=35.5824;RPPR=624.051;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=286;SRP=624.051;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:32,0:32:1137:0:0:0,-9.63296,-102.623 0/0:40:40,0:40:1417:0:0:0,-12.0412,-127.81 0/0:29:29,0:29:997:0:0:0,-8.72987,-90.0289 0/0:72:69,3:69:2465:3:110:0,-11.4137,-211.801 0/0:61:58,3:58:2037:3:96:0,-9.40745,-174.615 0/1:67:58,9:58:1950:9:304:-7.5126,0,-155.577 dDocent_Contig_2703 8 . C A 748.602 . AB=0.206897;ABP=154.489;AC=2;AF=0.166667;AN=12;AO=45;CIGAR=1X2M1X;DP=564;DPB=564;DPRA=0.993333;EPP=100.727;EPPR=1108.29;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.994106;PAO=0;PQA=0;PQR=0;PRO=0;QA=1576;QR=18417;RO=509;RPL=0;RPP=100.727;RPPR=1108.29;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=509;SRP=1108.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:66:57,0,9:57:2001:0,9:0,315:-8.81261,-25.9713,-188.781,0,-163.16,-160.45 0|1:90:72,18,0:72:2586:18,0:631,0:-30.0136,0,-205.841,-51.6877,-211.26,-262.596 0|1:113:89,24,0:89:3325:24,0:833,0:-41.2558,0,-265.384,-68.0475,-272.609,-340.304 0|0:95:92,3,0:92:3316:3,0:112,0:0,-18.1516,-288.156,-27.6948,-289.059,-298.23 0|0:66:66,0,0:66:2366:0,0:0,0:0,-19.868,-213.15,-19.868,-213.15,-213.15 0|0:134:133,0,0:133:4823:0,0:0,0:0,-40.037,-433.756,-40.037,-433.756,-433.756 dDocent_Contig_2704 90 . T C 710.079 . AB=0.166213;ABP=358.167;AC=3;AF=0.25;AN=12;AO=65;CIGAR=1X;DP=799;DPB=799;DPRA=0.858844;EPP=144.156;EPPR=1596.87;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995913;PAO=0;PQA=0;PQR=0;PRO=0;QA=2201;QR=24864;RO=734;RPL=65;RPP=144.156;RPPR=1596.87;RPR=0;RUN=1;SAF=65;SAP=144.156;SAR=0;SRF=734;SRP=1596.87;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:96:74,22:74:2490:22:735:-37.563,0,-195.458 0/0:138:134,4:134:4556:4:137:0,-28.8741,-397.564 0/1:111:95,16:95:3246:16:533:-14.8723,0,-258.964 0/1:160:137,23:137:4632:23:796:-23.7945,0,-368.905 0/0:139:139,0:139:4699:0:0:0,-41.8432,-423.099 0/0:155:155,0:155:5241:0:0:0,-46.6596,-471.861 dDocent_Contig_2705 157 . C T 44.6558 . AB=0.142857;ABP=34.0313;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=185;DPB=185;DPRA=0.89172;EPP=11.6962;EPPR=396.047;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994475;PAO=0;PQA=0;PQR=0;PRO=0;QA=156;QR=6678;RO=181;RPL=0;RPP=11.6962;RPPR=396.047;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=396.047;SRR=181;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:655:0:0:0,-5.41854,-59.2743 0/0:15:15,0:15:570:0:0:0,-4.51545,-51.6386 0/0:29:29,0:29:1066:0:0:0,-8.72987,-96.2383 0/1:28:24,4:24:897:4:156:-5.98845,0,-72.6159 0/0:46:46,0:46:1668:0:0:0,-13.8474,-150.376 0/0:49:49,0:49:1822:0:0:0,-14.7505,-164.237 dDocent_Contig_2706 24 . C A 1683.4 . AB=0.0581395;ABP=148.852;AC=0;AF=0;AN=12;AO=5;CIGAR=1X2M1X;DP=572;DPB=572;DPRA=0.928058;EPP=13.8677;EPPR=1038.8;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.976939;PAO=0;PQA=0;PQR=0;PRO=0;QA=196;QR=18811;RO=477;RPL=0;RPP=13.8677;RPPR=1038.8;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=477;SRP=1038.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:60:58,0,2:58:2308:0,2:0,82:0,-17.4597,-207.484,-10.2821,-200.715,-200.113 0|0:54:49,0,5:49:1929:0,5:0,205:-2.57939,-17.3299,-175.999,0,-159.077,-157.572 0|0:69:67,0,2:67:2658:0,2:0,80:0,-20.169,-238.96,-13.1795,-232.37,-231.768 0|0:149:137,0,11:137:5372:0,11:0,428:0,-41.2411,-483.005,-5.93015,-447.84,-444.529 0|0:86:42,5,38:42:1655:5,38:196,1531:-113.551,-110.078,-244.72,0,-120.037,-124.715 0|0:154:124,0,29:124:4889:0,29:0,1151:-57.4127,-94.7404,-496.97,0,-402.226,-393.496 dDocent_Contig_2707 10 . C T 477.31 . AB=0.157895;ABP=273.416;AC=2;AF=0.166667;AN=12;AO=77;CIGAR=1X;DP=986;DPB=986;DPRA=0;EPP=170.214;EPPR=1972.54;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.675325;PAIREDR=0.954796;PAO=0;PQA=0;PQR=0;PRO=0;QA=2616;QR=34253;RO=907;RPL=0;RPP=170.214;RPPR=1972.54;RPR=77;RUN=1;SAF=77;SAP=170.214;SAR=0;SRF=907;SRP=1972.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:140:130,10:130:4969:10:340:0,-11.2199,-416.242 0/0:179:167,12:167:6299:12:420:0,-15.7544,-528.646 0/0:206:204,2:204:7635:2:26:0,-59.5422,-684.431 0/0:195:182,11:182:6957:11:381:0,-23.8672,-591.295 0/1:87:67,20:67:2540:20:678:-35.1379,0,-202.587 0/1:179:157,22:157:5853:22:771:-15.815,0,-472.791 dDocent_Contig_2708 7 . G T 261.185 . AB=0.125926;ABP=331.176;AC=1;AF=0.0833333;AN=12;AO=148;CIGAR=1X;DP=3477;DPB=3477;DPRA=0;EPP=324.388;EPPR=7207.96;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999397;PAO=0;PQA=0;PQR=0;PRO=0;QA=3441;QR=106319;RO=3318;RPL=0;RPP=324.388;RPPR=7207.96;RPR=148;RUN=1;SAF=148;SAP=324.388;SAR=0;SRF=3318;SRP=7207.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:259:242,17:242:7551:17:512:0,-31.6102,-633.205 0/1:270:235,34:235:7570:34:1206:-27.6414,0,-600.101 0/0:565:541,22:541:17296:22:459:0,-128.095,-1514.66 0/0:806:779,24:779:24992:24:507:0,-196.026,-2202.63 0/0:654:626,25:626:20297:25:348:0,-164.625,-1794.61 0/0:923:895,26:895:28613:26:409:0,-240.53,-2537.19 dDocent_Contig_2709 13 . G A 41967.6 . AB=0.85228;ABP=1776.2;AC=6;AF=0.5;AN=12;AO=1402;CIGAR=1X;DP=1645;DPB=1645;DPRA=0;EPP=3047.41;EPPR=526.335;GTI=0;LEN=1;MEANALT=1.33333;MQM=59.9914;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.000713267;PAIREDR=0.709544;PAO=0;PQA=0;PQR=0;PRO=0;QA=52272;QR=9423;RO=241;RPL=0;RPP=3047.41;RPPR=526.335;RPR=1402;RUN=1;SAF=1402;SAP=3047.41;SAR=0;SRF=241;SRP=526.335;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:107:20,86:20:780:86:3182:-254.522,0,-38.5162 0/1:142:32,110:32:1261:110:4109:-327.141,0,-71.018 0/1:294:28,265:28:1092:265:9880:-800.374,0,-10.0872 0/1:379:68,311:68:2663:311:11518:-922.113,0,-125.728 0/1:324:40,284:40:1578:284:10493:-846.458,0,-44.7323 0/1:399:53,346:53:2049:346:13090:-1057.37,0,-64.4997 dDocent_Contig_2710 65 . T C 366.832 . AB=0.173913;ABP=66.7383;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=2M1X12M;DP=150;DPB=137.867;DPRA=5.44737;EPP=29.068;EPPR=263.587;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.666667;PAIREDR=0.991667;PAO=0;PQA=0;PQR=0;PRO=0;QA=437;QR=4033;RO=120;RPL=12;RPP=29.068;RPPR=263.587;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=120;SRP=263.587;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:27:22,5,0:22:742:5,0:174,0:-7.87414,0,-58.9676,-14.4968,-60.4727,-74.6236 0|1:69:51,3,12:51:1707:3,12:100,437:-20.4281,-27.6843,-165.021,0,-130.221,-134.703 0|0:11:11,0,0:11:383:0,0:0,0:0,-3.31133,-34.805,-3.31133,-34.805,-34.805 0|0:21:20,0,0:20:680:0,0:0,0:0,-6.0206,-61.1504,-6.0206,-61.1504,-61.1504 0|0:6:6,0,0:6:198:0,0:0,0:0,-1.80618,-18.1443,-1.80618,-18.1443,-18.1443 0|0:16:10,6,0:10:323:6,0:201,0:-13.6027,0,-24.568,-16.613,-26.3741,-42.6568 dDocent_Contig_2711 21 . T A 1660.21 . AB=0.0320802;ABP=7591.06;AC=1;AF=0.0833333;AN=12;AO=172;CIGAR=1X3M1X;DP=5423;DPB=5422.4;DPRA=0;EPP=342.568;EPPR=9854.98;GTI=0;LEN=1;MEANALT=8.66667;MQM=58.7384;MQMR=60;NS=6;NUMALT=2;ODDS=4.44089e-16;PAIRED=0.936047;PAIREDR=0.997798;PAO=0;PQA=0;PQR=0;PRO=0;QA=6752;QR=174856;RO=4541;RPL=0;RPP=376.504;RPPR=9863.67;RPR=172;RUN=1;SAF=168;SAP=342.568;SAR=4;SRF=4540;SRP=9854.98;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:938:804,16,77:804:31034:16,77:629,3063:-10.1612,-201.499,-2745.21,0,-2497.84,-2525.36 0|0:1454:1202,41,134:1202:46230:41,134:1601,5294:-73.7586,-304.331,-4087.15,0,-3663.91,-3754.84 0|0:809:674,11,53:674:25949:11,53:438,2098:0,-166.904,-2294.01,-30.2362,-2124.67,-2144.7 0|0:1043:883,13,93:883:34016:13,93:512,3687:-37.667,-261.479,-3050.45,0,-2750.9,-2764.9 0|1:555:449,58,45:449:17270:58,45:2272,1785:-51.6557,0,-1400.29,-39.8947,-1270.83,-1444.1 0|0:624:529,33,46:529:20357:33,46:1300,1798:0,-52.299,-1713.58,-11.4512,-1575.73,-1668.82 dDocent_Contig_2712 7 . G T 854.48 . AB=0.0625;ABP=56.2114;AC=0;AF=0;AN=12;AO=2;CIGAR=1X4M;DP=147;DPB=147;DPRA=0;EPP=7.35324;EPPR=213.643;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.917526;PAO=0;PQA=0;PQR=0;PRO=0;QA=77;QR=3452;RO=97;RPL=0;RPP=7.35324;RPPR=213.643;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=97;SRP=213.643;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:23:19,4,0,0:19:651:4,0,0:148,0,0:-6.72818,0,-51.9765,-12.4477,-53.1806,-65.264,-12.4477,-53.1806,-65.264,-65.264 0|0:24:17,6,1,0:17:621:6,1,0:213,31,0:-12.2732,0,-48.9818,-14.9086,-48.3026,-65.3511,-17.3907,-50.788,-65.6521,-68.1384 0|0:10:7,3,0,0:7:253:3,0,0:104,0,0:-6.67049,0,-20.1061,-8.7777,-21.0092,-29.4365,-8.7777,-21.0092,-29.4365,-29.4365 0|0:18:11,4,2,0:11:380:4,2,0:138,63,0:-7.9223,0,-29.7138,-6.16872,-25.854,-36.4547,-11.2336,-30.9179,-37.0568,-42.121 0|0:32:20,9,0,2:20:737:9,0,2:319,0,77:-19.9924,0,-57.5965,-26.013,-60.3058,-86.2908,-19.6828,-53.9812,-79.9667,-79.3647 0|0:40:23,17,0,0:23:810:17,0,0:609,0,0:-43.0833,0,-61.1712,-50.0069,-66.2887,-115.94,-50.0069,-66.2887,-115.94,-115.94 dDocent_Contig_2713 97 . A G 11226.8 . AB=0.392956;ABP=147.125;AC=6;AF=0.5;AN=12;AO=569;CIGAR=1X;DP=1448;DPB=1448;DPRA=0;EPP=1238.58;EPPR=1894.36;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998243;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=17406;QR=22831;RO=871;RPL=569;RPP=1238.58;RPPR=1894.36;RPR=0;RUN=1;SAF=569;SAP=1238.58;SAR=0;SRF=871;SRP=1894.36;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:170:97,73:97:2547:73:2136:-141.317,0,-178.282 0/1:205:121,83:121:2969:83:2513:-164.734,0,-205.736 0/1:313:218,93:218:5907:93:2883:-166.039,0,-438.14 0/1:255:148,104:148:3853:104:3186:-210.903,0,-270.905 0/1:218:112,104:112:2979:104:3270:-229.459,0,-203.253 0/1:287:175,112:175:4576:112:3418:-221.453,0,-325.64 dDocent_Contig_2714 19 . A C 16827.1 . AB=0.082397;ABP=811.888;AC=0;AF=0;AN=12;AO=44;CIGAR=1M1X6M;DP=2352;DPB=2424.5;DPRA=1.54113;EPP=98.5551;EPPR=3731.43;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=59.9499;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.995923;PAO=0;PQA=0;PQR=0;PRO=0;QA=1767;QR=67369;RO=1717;RPL=0;RPP=98.5551;RPPR=3731.43;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=1717;SRP=3731.43;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:279:279,0,0:279:10979:0,0:0,0:0,-83.9874,-987.295,-83.9874,-987.295,-987.295 0|0:358:356,0,0:356:13999:0,0:0,0:0,-107.167,-1258.71,-107.167,-1258.71,-1258.71 0|0:236:216,17,0:216:8430:17,0:658,0:0,-10.8237,-698.823,-65.0225,-703.94,-757.983 0|0:513:509,0,0:509:19936:0,0:0,0:0,-153.224,-1792.45,-153.224,-1792.45,-1792.45 0|0:534:179,309,44:179:7059:309,44:11989,1767:-930.991,0,-487.712,-839.272,-435.128,-1406.76 0|0:432:178,253,0:178:6966:253,0:9838,0:-754.945,0,-496.743,-808.529,-572.904,-1381.23 dDocent_Contig_2715 53 . G C 185.742 . AB=0.208333;ABP=38.4777;AC=1;AF=0.0833333;AN=12;AO=28;CIGAR=1X;DP=536;DPB=536;DPRA=1.06118;EPP=63.8115;EPPR=929.098;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.95858;PAO=0;PQA=0;PQR=0;PRO=0;QA=1080;QR=19720;RO=507;RPL=28;RPP=63.8115;RPPR=929.098;RPR=0;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=507;SRP=1103.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:73:70,3:70:2710:3:121:0,-10.6952,-232.753 0/0:120:112,8:112:4369:8:311:0,-7.77237,-364.836 0/1:48:38,10:38:1497:10:380:-20.0971,0,-120.524 0/0:91:85,6:85:3252:6:227:0,-6.60638,-271.962 0/0:85:85,0:85:3309:0:0:0,-25.5875,-297.894 0/0:119:117,1:117:4583:1:41:0,-31.8364,-408.304 dDocent_Contig_2716 7 . C G 12735.9 . AB=0.446388;ABP=35.84;AC=6;AF=0.5;AN=12;AO=587;CIGAR=1X;DP=1315;DPB=1315;DPRA=0;EPP=1277.66;EPPR=1527.38;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998575;PAO=0;PQA=0;PQR=0;PRO=0;QA=18586;QR=26850;RO=702;RPL=0;RPP=1277.66;RPPR=1527.38;RPR=587;RUN=1;SAF=587;SAP=1277.66;SAR=0;SRF=702;SRP=1527.38;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:202:108,94:108:4056:94:3059:-214.688,0,-304.32 0/1:241:109,127:109:4157:127:3953:-284.693,0,-303.001 0/1:222:93,124:93:3593:124:3996:-294.257,0,-257.957 0/1:240:110,122:110:4191:122:3752:-267.822,0,-307.259 0/1:207:131,69:131:5070:69:2247:-142.039,0,-395.893 0/1:203:151,51:151:5783:51:1579:-81.309,0,-459.387 dDocent_Contig_2717 7 . T G 65229 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=2304;CIGAR=1X;DP=2413;DPB=2413;DPRA=0;EPP=5006.08;EPPR=183.243;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999566;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=73655;QR=1161;RO=83;RPL=0;RPP=5006.08;RPPR=183.243;RPR=2304;RUN=1;SAF=2304;SAP=5006.08;SAR=0;SRF=83;SRP=183.243;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:365:13,351:13:194:351:11016:-973.658,-92.0792,0 1/1:554:15,535:15:197:535:17156:-1525.68,-147.836,0 1/1:391:17,372:17:256:372:11818:-1040.23,-94.0252,0 1/1:772:29,727:29:409:727:23326:-2061.58,-190.861,0 1/1:105:4,100:4:50:100:3237:-286.868,-26.7952,0 1/1:226:5,219:5:55:219:7102:-634.041,-62.6307,0 dDocent_Contig_2718 209 . N G 293.782 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=41;CIGAR=1X;DP=41;DPB=41;DPRA=0;EPP=92.0407;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=7.63415;MQMR=0;NS=6;NUMALT=1;ODDS=3.38813e-21;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1626;QR=0;RO=0;RPL=41;RPP=92.0407;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=92.0407;SAR=41;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:6:0,6:0:0:6:240:-6.75192,-1.80618,0 1/1:9:0,9:0:0:9:352:-4.73628,-2.70927,0 1/1:8:0,8:0:0:8:317:-7.19655,-2.40824,0 1/1:7:0,7:0:0:7:280:-3.83913,-2.10721,0 1/1:10:0,10:0:0:10:396:-5.45811,-3.0103,0 1/1:1:0,1:0:0:1:41:-0.599897,-0.30103,0 dDocent_Contig_2719 16 . C T 994.547 . AB=0.127726;ABP=775.824;AC=3;AF=0.25;AN=12;AO=117;CIGAR=1X;DP=1216;DPB=1216;DPRA=0;EPP=257.073;EPPR=2387.29;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.991453;PAIREDR=0.992714;PAO=0;PQA=0;PQR=0;PRO=0;QA=4689;QR=43888;RO=1098;RPL=0;RPP=257.073;RPPR=2387.29;RPR=117;RUN=1;SAF=117;SAP=257.073;SAR=0;SRF=1098;SRP=2387.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:146:137,9:137:5490:9:363:0,-10.9167,-460.882 0/1:196:161,35:161:6471:35:1401:-67.3356,0,-523.101 0/1:220:199,21:199:7935:21:851:-10.6741,0,-647.483 0/0:207:189,17:189:7576:17:668:0,-1.97664,-620.984 0/1:226:200,26:200:7959:26:1049:-26.6668,0,-647.828 0/0:221:212,9:212:8457:9:357:0,-34.0356,-728.152 dDocent_Contig_2720 64 . T A 25265 . AB=0.79661;ABP=544.038;AC=8;AF=0.666667;AN=12;AO=776;CIGAR=1X;DP=927;DPB=927;DPRA=0;EPP=1688.07;EPPR=330.903;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=30807;QR=5987;RO=151;RPL=776;RPP=1688.07;RPPR=330.903;RPR=0;RUN=1;SAF=776;SAP=1688.07;SAR=0;SRF=151;SRP=330.903;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:159:37,122:37:1457:122:4775:-381.806,0,-83.5235 0/1:118:14,104:14:553:104:4151:-338.037,0,-14.5912 1/1:125:7,118:7:274:118:4686:-396.634,-12.6037,0 0/1:185:38,147:38:1520:147:5834:-469.184,0,-81.3542 1/1:94:0,94:0:0:94:3776:-339.839,-28.2968,0 0/1:246:55,191:55:2183:191:7585:-608.225,0,-122.587 dDocent_Contig_2721 33 . T G 6085.55 . AB=0.287559;ABP=336.999;AC=2;AF=0.166667;AN=12;AO=251;CIGAR=1X;DP=1964;DPB=1964;DPRA=1.31331;EPP=548.05;EPPR=3720.57;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9895;QR=68440;RO=1712;RPL=0;RPP=548.05;RPPR=3720.57;RPR=251;RUN=1;SAF=251;SAP=548.05;SAR=0;SRF=1712;SRP=3720.57;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:231:231,0:231:9302:0:0:0,-69.5379,-836.587 0/0:263:257,6:257:10293:6:246:0,-56.6508,-903.173 0/0:263:263,0:263:10493:0:0:0,-79.1709,-943.685 0/0:355:354,0:354:14082:0:0:0,-106.565,-1266.22 0/1:295:249,46:249:9966:46:1832:-76.2907,0,-807.474 0/1:557:358,199:358:14304:199:7817:-535.486,0,-1118.58 dDocent_Contig_2722 57 . C T 14803.3 . AB=0.717836;ABP=284.933;AC=6;AF=0.5;AN=12;AO=491;CIGAR=1X;DP=684;DPB=684;DPRA=0;EPP=1069.2;EPPR=419.933;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.959267;PAIREDR=0.9375;PAO=0;PQA=0;PQR=0;PRO=0;QA=18851;QR=7236;RO=192;RPL=491;RPP=1069.2;RPPR=419.933;RPR=0;RUN=1;SAF=491;SAP=1069.2;SAR=0;SRF=192;SRP=419.933;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:109:40,69:40:1499:69:2646:-205.518,0,-102.366 0/1:155:51,104:51:1926:104:3968:-310.552,0,-126.925 0/1:94:25,68:25:985:68:2650:-210.357,0,-60.6722 0/1:135:34,101:34:1236:101:3894:-309.911,0,-70.8726 0/1:85:19,66:19:710:66:2531:-202.395,0,-38.6411 0/1:106:23,83:23:880:83:3162:-252.817,0,-47.6066 dDocent_Contig_2723 14 . A T 3874.43 . AB=0.376506;ABP=46.9892;AC=3;AF=0.25;AN=12;AO=127;CIGAR=1X2M;DP=597;DPB=597;DPRA=2.90236;EPP=278.787;EPPR=964.973;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.992126;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5052;QR=17349;RO=443;RPL=0;RPP=278.787;RPPR=964.973;RPR=127;RUN=1;SAF=127;SAP=278.787;SAR=0;SRF=443;SRP=964.973;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:59:58,0,0:58:2258:0,0:0,0:0,-17.4597,-203.006,-17.4597,-203.006,-203.006 0|1:67:49,18,0:49:1915:18,0:714,0:-44.4169,0,-152.397,-59.1674,-157.816,-216.589 0|0:40:40,0,0:40:1553:0,0:0,0:0,-12.0412,-140.02,-12.0412,-140.02,-140.02 0|0:99:92,5,2:92:3585:5,2:199,81:0,-11.3139,-304.43,-21.0136,-299.255,-315.04 0|1:148:80,0,65:80:3163:0,65:0,2595:-189.637,-213.719,-474.001,0,-260.28,-240.713 0|1:184:124,0,60:124:4875:0,60:0,2376:-158.611,-195.939,-596.913,0,-401.369,-383.308 dDocent_Contig_2724 7 . A G 60962.3 . AB=0.498338;ABP=3.14025;AC=6;AF=0.5;AN=12;AO=2698;CIGAR=1X1M;DP=5414;DPB=5414;DPRA=0;EPP=5861.64;EPPR=5092.94;GTI=0;LEN=1;MEANALT=4.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=84762;QR=89054;RO=2344;RPL=0;RPP=5861.64;RPPR=5092.94;RPR=2698;RUN=1;SAF=2698;SAP=5861.64;SAR=0;SRF=2344;SRP=5092.94;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:841:498,35,291:498:18938:35,291:1171,9314:-600.361,-655.465,-2198.18,0,-1458.49,-1465.7 0|1:769:383,133,236:383:14528:133,236:4260,7367:-476.394,-248.486,-1399.73,0,-848.102,-1120.24 0|1:628:340,50,230:340:12936:50,230:1622,7105:-467.559,-439.045,-1485.04,0,-930.208,-991.826 0|1:1035:445,45,516:445:16981:45,516:1445,16265:-1173.9,-1191.41,-2571.05,0,-1276.82,-1237.93 0|1:780:256,0,515:256:9629:0,515:0,15746:-1184.52,-1261.59,-2050.52,0,-789.138,-634.107 0|1:1361:422,0,910:422:16042:0,910:0,28965:-2204.72,-2331.75,-3647.41,0,-1315.86,-1041.92 dDocent_Contig_2725 169 . A T 491.169 . AB=0.144;ABP=278.214;AC=1;AF=0.0833333;AN=12;AO=36;CIGAR=1X;DP=1018;DPB=1018;DPRA=1.6276;EPP=81.1833;EPPR=2133.22;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.998981;PAO=0;PQA=0;PQR=0;PRO=0;QA=1396;QR=38290;RO=981;RPL=36;RPP=81.1833;RPPR=2133.22;RPR=0;RUN=1;SAF=0;SAP=81.1833;SAR=36;SRF=0;SRP=2133.22;SRR=981;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:114:114,0:114:4472:0:0:0,-34.3174,-402.424 0/0:139:139,0:139:5492:0:0:0,-41.8432,-494.13 0/0:80:80,0:80:3091:0:0:0,-24.0824,-278.285 0/0:236:236,0:236:9144:0:0:0,-71.0431,-822.488 0/0:199:198,0:198:7662:0:0:0,-59.6039,-688.835 0/1:250:214,36:214:8429:36:1396:-50.6398,0,-682.913 dDocent_Contig_2726 13 . T G 4354.11 . AB=0.111397;ABP=4583.37;AC=5;AF=0.416666;AN=12;AO=436;CIGAR=1X1M;DP=4265;DPB=4265;DPRA=0;EPP=949.772;EPPR=8117.8;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.998662;PAO=0;PQA=0;PQR=0;PRO=0;QA=17003;QR=147276;RO=3737;RPL=0;RPP=949.772;RPPR=8117.8;RPR=436;RUN=1;SAF=436;SAP=949.772;SAR=0;SRF=3737;SRP=8117.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:412:329,0,83:329:12887:0,83:0,3247:-168.291,-267.33,-1326.92,0,-1059.98,-1034.99 0|1:498:426,0,72:426:16824:0,72:0,2801:-102.317,-230.556,-1614.87,0,-1384.7,-1363.03 0|1:728:666,0,62:666:26326:0,62:0,2436:-0.252739,-200.739,-2367.04,0,-2166.7,-2148.03 0|1:773:658,0,115:658:25891:0,115:0,4456:-168.336,-366.414,-2496.06,0,-2130.03,-2095.41 0|0:773:725,0,47:725:28553:0,47:0,1835:0,-218.247,-2567.06,-67.2229,-2416.23,-2402.08 0|1:1081:933,91,57:933:36795:91,57:3469,2228:-3.6865,0,-2999.8,-101.388,-2844.04,-3111.43 dDocent_Contig_2727 22 . A T 182.869 . AB=0.108597;ABP=297.083;AC=1;AF=0.0833333;AN=12;AO=31;CIGAR=1X;DP=890;DPB=890;DPRA=1.14976;EPP=70.3259;EPPR=1866.13;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996503;PAO=0;PQA=0;PQR=0;PRO=0;QA=1238;QR=34167;RO=858;RPL=0;RPP=70.3259;RPPR=1866.13;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=858;SRP=1866.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:101:101,0:101:3986:0:0:0,-30.404,-358.736 0/0:78:72,6:72:2827:6:241:0,-1.41404,-232.47 0/0:112:112,0:112:4460:0:0:0,-33.7154,-401.344 0/1:221:197,24:197:7855:24:956:-19.8098,0,-640.002 0/0:201:201,0:201:8042:0:0:0,-60.507,-723.348 0/0:177:175,1:175:6997:1:41:0,-49.2962,-625.318 dDocent_Contig_2728 15 . C T 52.0251 . AB=0.111111;ABP=85.7675;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=403;DPB=403;DPRA=0.685294;EPP=24.725;EPPR=856.399;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.951654;PAO=0;PQA=0;PQR=0;PRO=0;QA=397;QR=15577;RO=393;RPL=0;RPP=24.725;RPPR=856.399;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=393;SRP=856.399;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:63:56,7:56:2202:7:278:-6.42436,0,-179.394 0/0:57:56,1:56:2225:1:41:0,-13.0641,-196.318 0/0:40:39,1:39:1550:1:40:0,-8.04552,-135.736 0/0:73:72,1:72:2881:1:38:0,-18.1779,-255.597 0/0:72:72,0:72:2836:0:0:0,-21.6742,-255.342 0/0:98:98,0:98:3883:0:0:0,-29.5009,-349.472 dDocent_Contig_2729 39 . G C 1156.85 . AB=0.139063;ABP=727.21;AC=1;AF=0.0833333;AN=12;AO=209;CIGAR=1X;DP=5687;DPB=5687;DPRA=1.22021;EPP=456.848;EPPR=11870.1;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0.995215;PAIREDR=0.999634;PAO=0;PQA=0;PQR=0;PRO=0;QA=8100;QR=207935;RO=5465;RPL=0;RPP=456.848;RPPR=11870.1;RPR=209;RUN=1;SAF=209;SAP=456.848;SAR=0;SRF=5465;SRP=11870.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:520:519,0:519:19543:0:0:0,-156.235,-1757.36 0/1:640:550,89:550:20997:89:3443:-117.208,0,-1695.73 0/0:529:493,25:493:18941:25:927:0,-72.5891,-1619.83 0/0:1453:1369,84:1369:52115:84:3298:0,-140.479,-4389.76 0/0:1133:1133,0:1133:42971:0:0:0,-341.067,-3864.52 0/0:1412:1401,11:1401:53368:11:432:0,-385.82,-4760.07 dDocent_Contig_2730 47 . T C 92.0861 . AB=0.147059;ABP=76.5849;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=260;DPB=260;DPRA=1.30088;EPP=31.2394;EPPR=539.364;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.538462;PAIREDR=0.623482;PAO=0;PQA=0;PQR=0;PRO=0;QA=448;QR=8329;RO=247;RPL=0;RPP=31.2394;RPPR=539.364;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=247;SRP=539.364;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:11:11,0:11:383:0:0:0,-3.31133,-34.8049 0/0:27:26,1:26:894:1:35:0,-4.62918,-77.2755 0/0:32:32,0:32:1083:0:0:0,-9.63296,-97.7747 0/1:68:58,10:58:1867:10:343:-10.7315,0,-147.826 0/0:52:50,2:50:1717:2:70:0,-9.00616,-148.171 0/0:70:70,0:70:2385:0:0:0,-21.0721,-214.915 dDocent_Contig_2731 7 . G A 12464.4 . AB=0.43197;ABP=45.26;AC=2;AF=0.166667;AN=12;AO=471;CIGAR=1X;DP=2956;DPB=2956;DPRA=0.843636;EPP=1025.77;EPPR=5216.72;GTI=0;LEN=1;MEANALT=2.75;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=17909;QR=76478;RO=2401;RPL=0;RPP=1025.77;RPPR=5216.72;RPR=471;RUN=1;SAF=471;SAP=1025.77;SAR=0;SRF=2401;SRP=5216.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:261:251,0:251:8063:0:0:0,-75.5585,-725.497 0/0:395:363,16:363:11634:16:549:0,-64.6108,-997.238 0/0:410:397,1:397:12632:1:11:0,-118.822,-1135.47 0/0:839:811,0:811:25754:0:0:0,-244.135,-2316.86 0/1:505:297,199:297:9537:199:7622:-536.335,0,-708.725 0/1:546:282,255:282:8858:255:9727:-713.323,0,-635.336 dDocent_Contig_2732 88 . A T 44.7546 . AB=0.106294;ABP=965.653;AC=1;AF=0.0833333;AN=12;AO=281;CIGAR=1X;DP=5142;DPB=5142;DPRA=1.08229;EPP=613.194;EPPR=10541.2;GTI=0;LEN=1;MEANALT=1.8;MQM=60;MQMR=59.9996;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999794;PAO=0;PQA=0;PQR=0;PRO=0;QA=8993;QR=157798;RO=4853;RPL=281;RPP=613.194;RPPR=10541.2;RPR=0;RUN=1;SAF=281;SAP=613.194;SAR=0;SRF=4853;SRP=10541.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:715:639,76:639:20620:76:2452:-5.69729,0,-1640.3 0/0:855:780,74:780:25573:74:2366:0,-43.9569,-2087.96 0/0:724:667,57:667:22038:57:1837:0,-52.3446,-1817.49 0/0:1349:1273,73:1273:41421:73:2333:0,-195.31,-3516.79 0/0:697:694,1:694:22697:1:5:0,-208.844,-2041.74 0/0:802:800,0:800:25449:0:0:0,-240.824,-2289.98 dDocent_Contig_2733 98 . N C 184.575 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=0.666667;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=188;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:3:0,3:0:0:3:105:-9.79616,-0.90309,0 1/1:2:0,2:0:0:2:48:-4.55964,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_2734 7 . A G 63043.5 . AB=0.706205;ABP=1348.11;AC=6;AF=0.5;AN=12;AO=2572;CIGAR=1X;DP=3642;DPB=3642;DPRA=0;EPP=5588.04;EPPR=2126.71;GTI=0;LEN=1;MEANALT=2.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.975505;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=82078;QR=37252;RO=978;RPL=0;RPP=5588.04;RPPR=2126.71;RPR=2572;RUN=1;SAF=2572;SAP=5588.04;SAR=0;SRF=978;SRP=2126.71;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:617:203,397:203:7742:397:12858:-976.122,0,-515.811 0/1:897:263,617:263:9993:617:19511:-1490.42,0,-634.003 0/1:351:57,279:57:2169:279:8659:-677.839,0,-94.0183 0/1:808:234,551:234:8901:551:17719:-1357.79,0,-564.376 0/1:475:127,341:127:4831:341:10875:-837.552,0,-293.807 0/1:494:94,387:94:3616:387:12456:-975.853,0,-180.599 dDocent_Contig_2735 21 . G A 286.296 . AB=0.202899;ABP=55.9124;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=167;DPB=167;DPRA=3.52041;EPP=33.4109;EPPR=335.246;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=562;QR=6116;RO=153;RPL=0;RPP=33.4109;RPPR=335.246;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=153;SRP=335.246;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:845:0:0:0,-6.62266,-76.3475 0/1:69:55,14:55:2205:14:562:-30.1525,0,-177.841 0/0:19:19,0:19:763:0:0:0,-5.71957,-68.9925 0/0:40:40,0:40:1611:0:0:0,-12.0412,-145.223 0/0:8:8,0:8:324:0:0:0,-2.40824,-29.5294 0/0:9:9,0:9:368:0:0:0,-2.70927,-33.4854 dDocent_Contig_2736 7 . A G 52267 . AB=0.429962;ABP=239.351;AC=6;AF=0.5;AN=12;AO=2385;CIGAR=2M1X1M;DP=5547;DPB=5721;DPRA=0;EPP=5181.97;EPPR=5926.79;GTI=0;LEN=1;MEANALT=4.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.999633;PAO=0;PQA=0;PQR=0;PRO=0;QA=75340;QR=104328;RO=2728;RPL=0;RPP=5181.97;RPPR=5926.79;RPR=2385;RUN=1;SAF=2385;SAP=5181.97;SAR=0;SRF=2728;SRP=5926.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:641:108,66,447:108:4119:66,447:2500,14072:-1098.75,-926.292,-1244.35,0,-132.966,-203.379 0|1:907:201,80,605:201:7681:80,605:3031,19401:-1502.55,-1314.55,-1920.73,0,-381.778,-448.158 0|1:677:129,53,477:129:4955:53,477:2029,14798:-1148.73,-1021.04,-1411.86,0,-240.278,-263.202 0|1:987:456,100,415:456:17408:100,415:3786,13308:-934.879,-761.76,-2159.93,0,-1117.89,-1303.34 0|1:1143:938,32,165:938:35897:32,165:1206,5176:-133.549,-317.078,-3253.35,0,-2847.05,-2896.21 0|1:1192:896,15,276:896:34268:15,276:565,8585:-419.459,-642.881,-3450.41,0,-2765.74,-2728.96 dDocent_Contig_2737 13 . C T 210.635 . AB=0.125;ABP=178.9;AC=1;AF=0.0833333;AN=12;AO=80;CIGAR=1X;DP=1182;DPB=1182;DPRA=0;EPP=176.728;EPPR=2393.8;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.9875;PAIREDR=0.991826;PAO=0;PQA=0;PQR=0;PRO=0;QA=3221;QR=43940;RO=1101;RPL=0;RPP=176.728;RPPR=2393.8;RPR=80;RUN=1;SAF=80;SAP=176.728;SAR=0;SRF=1101;SRP=2393.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:153:147,6:147:5887:6:242:0,-23.9001,-507.462 0/0:389:365,24:365:14594:24:965:0,-29.95,-1225.2 0/1:144:126,18:126:5039:18:729:-22.5859,0,-410.025 0/0:221:203,18:203:8069:18:733:0,-0.234131,-659.5 0/0:112:107,5:107:4274:5:204:0,-14.9713,-365.879 0/0:163:153,9:153:6077:9:348:0,-17.4804,-515.014 dDocent_Contig_2738 32 . C T 455.528 . AB=0.148718;ABP=212.017;AC=2;AF=0.166667;AN=12;AO=41;CIGAR=1X1M;DP=495;DPB=495;DPRA=1.70982;EPP=92.0407;EPPR=923.715;GTI=0;LEN=1;MEANALT=2.25;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.853659;PAIREDR=0.929245;PAO=0;PQA=0;PQR=0;PRO=0;QA=1632;QR=16825;RO=424;RPL=0;RPP=92.0407;RPPR=923.715;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=424;SRP=923.715;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:47:45,2,0:45:1759:2,0:82,0:0,-13.0086,-157.394,-13.5463,-157.996,-158.46 0|1:90:72,5,13:72:2873:5,13:198,525:-21.8549,-42.4303,-277.526,0,-235.749,-233.008 0|0:64:53,5,4:53:2131:5,4:197,162:0,-14.9171,-189.018,-2.50678,-177.165,-177.126 0|1:105:82,7,16:82:3273:7,16:278,625:-26.9197,-50.0328,-317.482,0,-268.216,-265.045 0|0:65:58,7,0:58:2309:7,0:278,0:0,-15.728,-204.135,-17.4597,-206.242,-207.878 0|0:124:114,2,8:114:4480:2,8:82,320:0,-33.9076,-401.74,-7.68626,-375.982,-374.045 dDocent_Contig_2740 48 . C A 18936.2 . AB=0.031348;ABP=1220.14;AC=0;AF=0;AN=12;AO=20;CIGAR=2M1X9M1X3M;DP=1277;DPB=1274.12;DPRA=0;EPP=46.4397;EPPR=726.111;GTI=0;LEN=1;MEANALT=10.6667;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=738;QR=12600;RO=333;RPL=20;RPP=46.4397;RPPR=726.111;RPR=0;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=333;SRP=726.111;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:95:6,5,0,12,5,58:6:225:5,0,12,5,58:178,0,413,185,2118:-186.355,-173.659,-190.584,-188.161,-192.09,-206.592,-154.62,-158.549,-173.05,-169.438,-173.026,-176.954,-191.456,-157.915,-189.951,-15.1039,-19.0345,-33.5362,0,-18.3996,-16.0765 0|0:110:5,18,7,9,5,61:5:191:18,7,9,5,61:650,259,320,179,2218:-217.013,-165.473,-175.728,-197.328,-159.957,-210.894,-192.441,-155.069,-186.924,-205.404,-203.921,-166.55,-198.404,-193.517,-218.089,-37.369,0,-31.8529,-26.9671,-38.4468,-34.6801 0|0:219:19,43,8,17,7,110:19:727:43,8,17,7,110:1568,286,597,256,4183:-405.768,-283.411,-330.123,-388.174,-319.755,-445.423,-362.901,-294.482,-399.245,-417.44,-390.571,-322.151,-426.914,-401.641,-448.12,-68.4189,0,-104.765,-79.493,-107.162,-94.9652 0|0:301:8,57,0,7,2,180:8:306:57,0,7,2,180:2080,0,258,76,6772:-697.241,-529.736,-537.688,-699.649,-554.847,-724.76,-678.55,-533.748,-703.661,-701.554,-693.416,-548.613,-718.527,-697.428,-717.925,-144.807,0,-169.919,-148.819,-163.686,-115.734 0|0:243:108,0,0,4,21,98:108:4068:0,0,4,21,98:0,0,146,774,3618:-263.367,-295.878,-629.22,-295.878,-629.22,-629.22,-283.949,-617.291,-617.291,-616.087,-232.583,-565.926,-565.926,-553.997,-559.604,0,-333.353,-333.353,-321.424,-270.059,-303.852 0|0:309:187,18,5,0,14,63:187:7083:18,5,0,14,63:678,193,0,520,2339:-135.098,-135.832,-711.109,-175.539,-700.676,-754.727,-191.39,-716.527,-756.233,-772.083,-148.834,-673.972,-713.677,-729.528,-725.313,0,-525.143,-564.848,-580.699,-538.144,-561.734 dDocent_Contig_2741 38 . T A 2025.04 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=33;CIGAR=3M1X2M;DP=2396;DPB=2278.5;DPRA=1.27475;EPP=74.6689;EPPR=4712.93;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.997695;PAO=0;PQA=0;PQR=0;PRO=0;QA=1272;QR=83558;RO=2169;RPL=0;RPP=74.6689;RPPR=4712.93;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=2169;SRP=4712.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:231:229,1,0:229:8814:1,0:30,0:0,-66.5323,-789.968,-68.9359,-790.269,-792.668 0|0:234:203,29,0:203:7805:29,0:1082,0:-27.5904,0,-632.141,-88.6995,-640.871,-729.449 0|0:339:286,51,0:286:11054:51,0:1859,0:-65.7978,0,-892.6,-151.892,-907.952,-1059.78 0|0:500:410,79,0:410:15834:79,0:2908,0:-114.338,0,-1276.62,-237.76,-1300.4,-1538.15 0|0:515:481,0,33:481:18516:0,33:0,1272:0,-144.795,-1664.98,-40.3886,-1560.56,-1550.62 0|0:577:560,16,0:560:21535:16,0:600,0:0,-119.466,-1882.49,-168.577,-1887.31,-1936.45 dDocent_Contig_2742 79 . A G 527.049 . AB=0.418182;ABP=6.20829;AC=1;AF=0.0833333;AN=12;AO=23;CIGAR=1X;DP=574;DPB=574;DPRA=0.529865;EPP=52.9542;EPPR=1199.49;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=783;QR=19349;RO=551;RPL=23;RPP=52.9542;RPPR=1199.49;RPR=0;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=551;SRP=1199.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:11:11,0:11:393:0:0:0,-3.31133,-35.711 0/0:9:9,0:9:322:0:0:0,-2.70927,-29.3243 0/1:55:32,23:32:1109:23:783:-54.2277,0,-83.558 0/0:50:50,0:50:1740:0:0:0,-15.0515,-156.881 0/0:140:140,0:140:4926:0:0:0,-42.1442,-443.499 0/0:309:309,0:309:10859:0:0:0,-93.0183,-977.24 dDocent_Contig_2743 34 . G T 1320.98 . AB=0.358108;ABP=28.8919;AC=1;AF=0.0833333;AN=12;AO=53;CIGAR=1X;DP=434;DPB=434;DPRA=2.58741;EPP=118.098;EPPR=830.341;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1977;QR=15106;RO=381;RPL=0;RPP=118.098;RPPR=830.341;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=381;SRP=830.341;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:985:0:0:0,-7.52575,-88.9475 0/0:43:43,0:43:1719:0:0:0,-12.9443,-154.932 0/0:59:59,0:59:2320:0:0:0,-17.7608,-208.953 0/0:86:86,0:86:3450:0:0:0,-25.8886,-310.537 0/1:148:95,53:95:3691:53:1977:-133.621,0,-287.672 0/0:73:73,0:73:2941:0:0:0,-21.9752,-264.778 dDocent_Contig_2744 35 . T A 14521.8 . AB=0.728814;ABP=244.485;AC=7;AF=0.583333;AN=12;AO=452;CIGAR=1X;DP=596;DPB=596;DPRA=0;EPP=984.516;EPPR=315.702;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=18008;QR=5792;RO=144;RPL=0;RPP=984.516;RPPR=315.702;RPR=452;RUN=1;SAF=452;SAP=984.516;SAR=0;SRF=144;SRP=315.702;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:39:8,31:8:314:31:1246:-100.671,0,-16.8774 0/1:68:15,53:15:601:53:2100:-168.715,0,-33.9572 0/1:112:22,90:22:884:90:3583:-288.782,0,-46.1514 0/1:258:76,182:76:3072:182:7264:-575.725,0,-198.878 1/1:65:0,65:0:0:65:2594:-233.597,-19.567,0 0/1:54:23,31:23:921:31:1221:-93.9113,0,-66.9362 dDocent_Contig_2745 81 . A G 299.874 . AB=0.118919;ABP=703.081;AC=2;AF=0.166667;AN=12;AO=100;CIGAR=1X;DP=1744;DPB=1744;DPRA=0.802299;EPP=220.158;EPPR=3566.4;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998781;PAO=0;PQA=0;PQR=0;PRO=0;QA=3279;QR=54620;RO=1641;RPL=100;RPP=220.158;RPPR=3566.4;RPR=0;RUN=1;SAF=100;SAP=220.158;SAR=0;SRF=1641;SRP=3566.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:254:218,34:218:7258:34:1140:-26.8766,0,-577.325 0/1:301:268,32:268:8867:32:1074:-6.33263,0,-707.473 0/0:325:297,28:297:9815:28:863:0,-19.8783,-805.432 0/0:233:230,3:230:7711:3:105:0,-60.3438,-684.292 0/0:283:280,3:280:9368:3:97:0,-76.1406,-834.124 0/0:348:348,0:348:11601:0:0:0,-104.758,-1044.08 dDocent_Contig_2746 22 . A G 34.9132 . AB=0.111111;ABP=73.9451;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=724;DPB=724;DPRA=0.402985;EPP=16.0391;EPPR=1562.13;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998607;PAO=0;PQA=0;PQR=0;PRO=0;QA=229;QR=28773;RO=718;RPL=0;RPP=16.0391;RPPR=1562.13;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=718;SRP=1562.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:48,6:48:1924:6:229:-4.71303,0,-157.101 0/0:89:89,0:89:3551:0:0:0,-26.7917,-319.627 0/0:80:80,0:80:3218:0:0:0,-24.0824,-289.681 0/0:177:177,0:177:7105:0:0:0,-53.2823,-639.109 0/0:94:94,0:94:3772:0:0:0,-28.2968,-339.485 0/0:230:230,0:230:9203:0:0:0,-69.2369,-827.714 dDocent_Contig_2747 52 . C G 375.488 . AB=0.272727;ABP=27.6861;AC=1;AF=0.0833333;AN=12;AO=27;CIGAR=1X;DP=572;DPB=572;DPRA=1.27888;EPP=61.6401;EPPR=1186.46;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.983486;PAO=0;PQA=0;PQR=0;PRO=0;QA=1097;QR=21753;RO=545;RPL=27;RPP=61.6401;RPPR=1186.46;RPR=0;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=545;SRP=1186.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:55:40,15:40:1620:15:611:-38.7706,0,-129.468 0/0:51:51,0:51:2026:0:0:0,-15.3525,-182.529 0/0:117:115,2:115:4610:2:82:0,-27.4408,-407.027 0/0:149:139,10:139:5489:10:404:0,-8.13341,-457.133 0/0:79:79,0:79:3157:0:0:0,-23.7814,-284.202 0/0:121:121,0:121:4851:0:0:0,-36.4246,-436.474 dDocent_Contig_2748 72 . G A 920.527 . AB=0.26484;ABP=108.203;AC=4;AF=0.333333;AN=12;AO=65;CIGAR=1X;DP=320;DPB=320;DPRA=0;EPP=144.156;EPPR=556.736;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.753846;PAIREDR=0.752941;PAO=0;PQA=0;PQR=0;PRO=0;QA=2052;QR=8375;RO=255;RPL=65;RPP=144.156;RPPR=556.736;RPR=0;RUN=1;SAF=65;SAP=144.156;SAR=0;SRF=255;SRP=556.736;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:40,1:40:1304:1:34:0,-8.94332,-114.252 0/1:39:31,8:31:1028:8:256:-11.6144,0,-81.0801 0/1:54:36,18:36:1212:18:557:-34.1685,0,-93.1256 0/1:81:57,24:57:1902:24:756:-43.9561,0,-147.073 0/1:45:37,8:37:1152:8:253:-9.5349,0,-90.4149 0/0:60:54,6:54:1777:6:196:0,-0.0999614,-142.248 dDocent_Contig_2749 48 . C G 201.364 . AB=0.130137;ABP=176.49;AC=1;AF=0.0833333;AN=12;AO=53;CIGAR=1X;DP=881;DPB=881;DPRA=2.12202;EPP=118.098;EPPR=1792.31;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2026;QR=32780;RO=828;RPL=0;RPP=118.098;RPPR=1792.31;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=828;SRP=1800.99;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:146:127,19:127:5025:19:722:-21.3582,0,-408.206 0/0:249:236,13:236:9369:13:497:0,-29.8811,-797.602 0/0:113:106,7:106:4185:7:270:0,-9.35214,-351.96 0/0:205:191,14:191:7567:14:537:0,-13.0399,-632.006 0/0:71:71,0:71:2777:0:0:0,-21.3731,-250.051 0/0:97:97,0:97:3857:0:0:0,-29.1999,-347.131 dDocent_Contig_2750 12 . T G 2682.35 . AB=0.088968;ABP=415.366;AC=6;AF=0.5;AN=12;AO=25;CIGAR=4M1X3M;DP=490;DPB=488.875;DPRA=0;EPP=57.2971;EPPR=689.196;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.996835;PAO=0;PQA=0;PQR=0;PRO=0;QA=1003;QR=11747;RO=316;RPL=0;RPP=57.2971;RPPR=689.196;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=316;SRP=689.196;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:64:52,0,11,0:52:1957:0,11,0:0,381,0:-14.169,-29.8226,-190.191,0,-160.318,-157.007,-29.8226,-190.191,-160.318,-190.191 0|1:84:44,0,33,7:44:1607:0,33,7:0,1256,280:-89.4749,-102.72,-233.993,0,-131.253,-121.319,-79.6517,-210.926,-108.183,-208.819 0|1:115:90,0,19,5:90:3339:0,19,5:0,594,205:-16.8346,-43.9273,-317.166,0,-273.2,-267.48,-26.9813,-300.244,-256.277,-298.739 0|1:86:50,5,29,0:50:1866:5,29,0:197,1065,0:-70.9835,-75.5136,-226.775,0,-142.319,-144.114,-86.035,-228.28,-152.844,-238.808 0|1:59:36,0,22,0:36:1339:0,22,0:0,763,0:-48.7119,-59.549,-169.158,0,-109.599,-102.976,-59.549,-169.158,-109.599,-169.158 0|1:82:44,0,24,13:44:1639:0,24,13:0,713,518:-39.2828,-52.5281,-186.711,0,-134.138,-126.913,-9.83529,-144.049,-91.4798,-140.136 dDocent_Contig_2751 50 . T C 1881.4 . AB=0.29249;ABP=97.6367;AC=2;AF=0.166667;AN=12;AO=74;CIGAR=1X;DP=526;DPB=526;DPRA=1.85348;EPP=163.699;EPPR=984.516;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997788;PAO=0;PQA=0;PQR=0;PRO=0;QA=2967;QR=17991;RO=452;RPL=74;RPP=163.699;RPPR=984.516;RPR=0;RUN=1;SAF=74;SAP=163.699;SAR=0;SRF=452;SRP=984.516;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:47:47,0:47:1865:0:0:0,-14.1484,-168.06 0/0:61:61,0:61:2450:0:0:0,-18.3628,-220.642 0/0:64:64,0:64:2557:0:0:0,-19.2659,-230.263 0/0:101:101,0:101:4035:0:0:0,-30.404,-363.138 0/1:149:94,55:94:3692:55:2203:-153.588,0,-287.453 0/1:104:85,19:85:3392:19:764:-37.7739,0,-274.025 dDocent_Contig_2752 10 . T C 140.54 . AB=0.160714;ABP=59.0033;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=140;DPB=140;DPRA=1.25806;EPP=24.725;EPPR=285.302;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.8;PAIREDR=0.784615;PAO=0;PQA=0;PQR=0;PRO=0;QA=393;QR=4831;RO=130;RPL=0;RPP=24.725;RPPR=285.302;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=130;SRP=285.302;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:690:0:0:0,-5.71957,-62.4094 0/0:19:19,0:19:734:0:0:0,-5.71957,-66.3766 0/1:32:25,7:25:917:7:276:-15.576,0,-73.1872 0/0:22:21,1:21:748:1:40:0,-2.62698,-63.6271 0/1:24:22,2:22:821:2:77:-0.0834803,0,-66.9739 0/0:24:24,0:24:921:0:0:0,-7.22472,-83.1954 dDocent_Contig_2753 35 . A G 341.983 . AB=0.132353;ABP=242.511;AC=1;AF=0.0833333;AN=12;AO=30;CIGAR=1X;DP=1403;DPB=1403;DPRA=0.73424;EPP=68.1545;EPPR=2984.44;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1193;QR=53042;RO=1373;RPL=0;RPP=68.1545;RPPR=2984.44;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=1373;SRP=2984.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:187:186,1:186:7204:1:36:0,-52.6943,-644.521 0/0:203:201,2:201:7864:2:81:0,-53.4234,-699.763 0/0:244:244,0:244:9450:0:0:0,-73.4513,-850.029 0/0:262:262,0:262:10043:0:0:0,-78.8699,-903.39 0/0:303:303,0:303:11699:0:0:0,-91.2121,-1052.29 0/1:204:177,27:177:6782:27:1076:-35.7211,0,-548.763 dDocent_Contig_2754 7 . G A 14556.5 . AB=0.538217;ABP=14.9603;AC=4;AF=0.333333;AN=12;AO=509;CIGAR=1X;DP=1165;DPB=1165;DPRA=2.22708;EPP=1108.29;EPPR=1371.04;GTI=0;LEN=1;MEANALT=2.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=19428;QR=20188;RO=630;RPL=0;RPP=1108.29;RPPR=1371.04;RPR=509;RUN=1;SAF=509;SAP=1108.29;SAR=0;SRF=630;SRP=1371.04;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:221:117,97:117:3811:97:3722:-270.486,0,-278.518 0/1:317:139,174:139:4358:174:6656:-504.589,0,-297.988 0/1:157:53,103:53:1760:103:3928:-306.546,0,-111.576 0/1:247:108,133:108:3452:133:5044:-381.255,0,-238.113 0/0:96:93,0:93:2981:0:0:0,-27.9958,-268.309 0/0:127:120,2:120:3826:2:78:0,-29.6365,-337.256 dDocent_Contig_2755 7 . T G 33876.8 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=1205;CIGAR=1X;DP=1255;DPB=1255;DPRA=0;EPP=2619.63;EPPR=109.412;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=38309;QR=669;RO=49;RPL=0;RPP=2619.63;RPPR=109.412;RPR=1205;RUN=1;SAF=1205;SAP=2619.63;SAR=0;SRF=49;SRP=109.412;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:137:4,133:4:72:133:4254:-376.334,-34.5813,0 1/1:169:7,162:7:95:162:5089:-449.392,-42.1885,0 1/1:140:6,134:6:82:134:4340:-383.193,-34.6276,0 1/1:159:6,153:6:80:153:4993:-442.124,-40.5306,0 1/1:418:18,400:18:230:400:12703:-1122.19,-105.003,0 1/1:232:8,223:8:110:223:6930:-613.662,-59.6137,0 dDocent_Contig_2756 11 . G A 112.38 . AB=0.160714;ABP=59.0033;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=181;DPB=181;DPRA=1.20732;EPP=29.068;EPPR=369.989;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.916667;PAIREDR=0.745562;PAO=0;PQA=0;PQR=0;PRO=0;QA=451;QR=6521;RO=169;RPL=0;RPP=29.068;RPPR=369.989;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=169;SRP=369.989;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:18,4:18:663:4:136:-5.9508,0,-53.3599 0/1:34:29,5:29:1130:5:204:-8.50901,0,-91.7561 0/0:32:32,0:32:1245:0:0:0,-9.63296,-112.327 0/0:43:40,3:40:1554:3:111:0,-2.59199,-129.754 0/0:34:34,0:34:1297:0:0:0,-10.235,-116.999 0/0:16:16,0:16:632:0:0:0,-4.81648,-57.2159 dDocent_Contig_2757 30 . G A 531.211 . AB=0.125926;ABP=495.259;AC=3;AF=0.25;AN=12;AO=62;CIGAR=1X;DP=802;DPB=802;DPRA=0.937589;EPP=137.642;EPPR=1603.39;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.995929;PAO=0;PQA=0;PQR=0;PRO=0;QA=2435;QR=28337;RO=737;RPL=0;RPP=137.642;RPPR=1603.39;RPR=62;RUN=1;SAF=62;SAP=137.642;SAR=0;SRF=737;SRP=1603.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:134:121,13:121:4588:13:512:-6.08733,0,-372.589 0/0:171:158,10:158:6136:10:406:0,-14.0714,-515.206 0/1:88:73,15:73:2871:15:588:-26.7618,0,-232.016 0/1:183:160,23:160:6106:23:892:-25.4939,0,-494.316 0/0:85:84,1:84:3191:1:37:0,-21.8897,-283.613 0/0:141:141,0:141:5445:0:0:0,-42.4452,-489.966 dDocent_Contig_2758 75 . A C 39166 . AB=0.813995;ABP=969.846;AC=9;AF=0.75;AN=12;AO=1417;CIGAR=1X;DP=1647;DPB=1647;DPRA=0;EPP=3079.99;EPPR=498.106;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998589;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=47986;QR=7781;RO=228;RPL=1417;RPP=3079.99;RPPR=498.106;RPR=0;RUN=1;SAF=1417;SAP=3079.99;SAR=0;SRF=228;SRP=498.106;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:178:11,166:11:381:166:5603:-469.814,-18.9258,0 1/1:183:8,175:8:251:175:5906:-508.796,-32.1922,0 0/1:117:13,104:13:450:104:3549:-284.415,0,-5.6106 1/1:157:0,157:0:0:157:5322:-479.15,-47.2617,0 0/1:611:79,531:79:2694:531:17942:-1430.57,0,-58.7357 0/1:401:117,284:117:4005:284:9664:-749.074,0,-239.95 dDocent_Contig_2760 17 . G A 1125.46 . AB=0.12114;ABP=1052.75;AC=1;AF=0.0833333;AN=12;AO=103;CIGAR=1X;DP=4521;DPB=4521;DPRA=0.960707;EPP=226.672;EPPR=9590.06;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.999773;PAO=0;PQA=0;PQR=0;PRO=0;QA=4094;QR=175304;RO=4415;RPL=0;RPP=226.672;RPPR=9590.06;RPR=103;RUN=1;SAF=103;SAP=226.672;SAR=0;SRF=4415;SRP=9590.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:763:762,0:762:30258:0:0:0,-229.385,-2720.17 0/0:1085:1084,0:1084:42970:0:0:0,-326.317,-3863.14 0/0:625:623,1:623:24702:1:10:0,-187.097,-2219.89 0/0:659:659,0:659:26186:0:0:0,-198.379,-2354.47 0/1:842:740,102:740:29439:102:4084:-114.069,0,-2393.41 0/0:547:547,0:547:21749:0:0:0,-164.663,-1955.59 dDocent_Contig_2761 19 . A G 1154.08 . AB=0.0172786;ABP=940.116;AC=0;AF=0;AN=12;AO=74;CIGAR=2M1X2M;DP=2745;DPB=2704;DPRA=0;EPP=163.699;EPPR=5340.49;GTI=0;LEN=1;MEANALT=3.6;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.999593;PAO=0;PQA=0;PQR=0;PRO=0;QA=2842;QR=95077;RO=2458;RPL=0;RPP=163.699;RPPR=5340.49;RPR=74;RUN=1;SAF=74;SAP=163.699;SAR=0;SRF=2458;SRP=5340.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:436:419,5,11:419:16217:5,11:186,438:0,-110.917,-1441.48,-90.0508,-1406.92,-1418.83 0|0:463:409,44,8:409:15849:44,8:1663,310:-13.1712,0,-1288.74,-110.828,-1276.52,-1410.42 0|0:572:490,81,0:490:18980:81,0:3084,0:-105.459,0,-1534.75,-252.963,-1559.13,-1812.08 0|0:341:318,17,6:318:12201:17,6:612,220:0,-45.8142,-1042.12,-77.7537,-1029.26,-1077.37 0|0:527:480,28,16:480:18594:28,16:1051,632:0,-58.4271,-1577.44,-92.4829,-1533.86,-1615.12 0|0:406:342,28,33:342:13236:28,33:1049,1242:0,-17.0388,-1095.84,-1.20583,-1002.53,-1078.5 dDocent_Contig_2762 16 . G C 174.772 . AB=0.233333;ABP=21.5402;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=2X;DP=211;DPB=211;DPRA=0.833333;EPP=10.7656;EPPR=267.779;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=59.016;NS=6;NUMALT=2;ODDS=0;PAIRED=0.285714;PAIREDR=0.529412;PAO=0;PQA=0;PQR=0;PRO=0;QA=248;QR=7281;RO=187;RPL=0;RPP=18.2106;RPPR=409.076;RPR=7;RUN=1;SAF=1;SAP=10.7656;SAR=6;SRF=169;SRP=267.779;SRR=18;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:27:27,0,0:27:1082:0,0:0,0:0,-8.12781,-97.6681,-8.12781,-97.6681,-97.6681 0|0:48:43,0,5:43:1697:0,5:0,204:-4.29459,-17.2389,-156.853,0,-140.02,-138.515 0|0:25:22,0,3:22:842:0,3:0,123:-3.93904,-10.5617,-79.5509,0,-69.3953,-68.4922 0|0:45:42,0,3:42:1649:0,3:0,122:0,-12.6433,-148.211,-2.17386,-138.146,-137.243 0|0:36:34,0,2:34:1280:0,2:0,77:0,-10.235,-114.877,-3.52888,-108.555,-107.953 0|1:30:19,7,4:19:731:7,4:248,154:-14.4642,0,-57.8979,-7.52927,-47.3617,-66.3526 dDocent_Contig_2763 87 . C T 607.749 . AB=0.206349;ABP=144.57;AC=4;AF=0.333333;AN=12;AO=44;CIGAR=1X;DP=312;DPB=312;DPRA=0;EPP=98.5551;EPPR=582.793;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.977273;PAIREDR=0.981273;PAO=0;PQA=0;PQR=0;PRO=0;QA=1544;QR=9566;RO=267;RPL=44;RPP=98.5551;RPPR=582.793;RPR=0;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=267;SRP=582.793;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:50:38,12:38:1352:12:425:-23.5359,0,-106.929 0/1:70:51,19:51:1771:19:648:-37.5641,0,-138.599 0/1:29:26,3:26:937:3:109:-1.43813,0,-75.9162 0/0:54:52,2:52:1887:2:67:0,-9.89309,-163.738 0/1:40:35,5:35:1255:5:184:-4.87723,0,-101.211 0/0:69:65,3:65:2364:3:111:0,-10.2536,-202.728 dDocent_Contig_2764 12 . A G 4251.66 . AB=0.308824;ABP=175.706;AC=2;AF=0.166667;AN=12;AO=169;CIGAR=1X;DP=1198;DPB=1198;DPRA=1.72893;EPP=369.989;EPPR=2235.28;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6606;QR=40385;RO=1028;RPL=0;RPP=369.989;RPPR=2235.28;RPR=169;RUN=1;SAF=169;SAP=369.989;SAR=0;SRF=1028;SRP=2235.28;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:167:167,0:167:6587:0:0:0,-50.272,-592.587 0/0:215:214,1:214:8398:1:27:0,-62.0217,-752.708 0/0:108:108,0:108:4229:0:0:0,-32.5112,-380.594 0/0:164:164,0:164:6402:0:0:0,-49.3689,-575.974 0/1:327:185,141:185:7316:141:5534:-399.375,0,-559.579 0/1:217:190,27:190:7453:27:1045:-29.0131,0,-605.131 dDocent_Contig_2765 7 . G A 3354.54 . AB=0.49187;ABP=3.15153;AC=6;AF=0.5;AN=12;AO=121;CIGAR=1X;DP=246;DPB=246;DPRA=0;EPP=265.758;EPPR=265.758;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.966942;PAIREDR=0.975207;PAO=0;PQA=0;PQR=0;PRO=0;QA=4644;QR=3876;RO=121;RPL=0;RPP=265.758;RPPR=265.758;RPR=121;RUN=1;SAF=121;SAP=265.758;SAR=0;SRF=121;SRP=265.758;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:19,22:19:656:22:846:-64.1209,0,-47.0094 0/1:39:17,22:17:528:22:848:-64.9023,0,-36.0705 0/1:41:34,7:34:1125:7:273:-12.5958,0,-89.1808 0/1:46:17,27:17:503:27:1029:-79.5125,0,-32.1329 0/1:40:15,24:15:474:24:915:-70.8067,0,-31.0887 0/1:39:19,19:19:590:19:733:-54.7379,0,-41.8225 dDocent_Contig_2766 19 . T A 2593.33 . AB=0.196319;ABP=525.283;AC=2;AF=0.166667;AN=12;AO=150;CIGAR=1X;DP=3054;DPB=3054;DPRA=0.900917;EPP=328.731;EPPR=6308.97;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5976;QR=115686;RO=2904;RPL=0;RPP=328.731;RPPR=6308.97;RPR=150;RUN=1;SAF=150;SAP=328.731;SAR=0;SRF=2904;SRP=6308.97;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:529:515,14:515:20472:14:558:0,-108.681,-1790.19 0/0:783:775,8:775:30924:8:323:0,-206.268,-2750.9 0/0:463:463,0:463:18436:0:0:0,-139.377,-1657.71 0/0:627:627,0:627:25004:0:0:0,-188.746,-2248.15 0/1:268:241,27:241:9559:27:1092:-17.8896,0,-779.05 0/1:384:283,101:283:11291:101:4003:-244.665,0,-899.827 dDocent_Contig_2767 21 . T C 19703.2 . AB=0.752994;ABP=374.384;AC=7;AF=0.583333;AN=12;AO=621;CIGAR=1X;DP=795;DPB=795;DPRA=0;EPP=1351.49;EPPR=380.846;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=24551;QR=6317;RO=174;RPL=0;RPP=1351.49;RPPR=380.846;RPR=621;RUN=1;SAF=621;SAP=1351.49;SAR=0;SRF=174;SRP=380.846;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:126:27,99:27:973:99:3910:-313.968,0,-49.9444 0/1:200:49,151:49:1786:151:5954:-475.466,0,-100.799 0/1:106:33,73:33:1186:73:2906:-229.729,0,-75.1298 0/1:147:25,122:25:878:122:4826:-389.998,0,-35.0749 0/1:89:31,58:31:1177:58:2283:-178.842,0,-79.437 1/1:127:9,118:9:317:118:4672:-391.538,-9.36474,0 dDocent_Contig_2768 7 . G A 48.7233 . AB=0.103448;ABP=121.842;AC=1;AF=0.0833333;AN=12;AO=38;CIGAR=1X;DP=2097;DPB=2097;DPRA=0;EPP=85.5263;EPPR=4309.04;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.999496;PAO=0;PQA=0;PQR=0;PRO=0;QA=1419;QR=61848;RO=1983;RPL=0;RPP=85.5263;RPPR=4309.04;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=1983;SRP=4309.04;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:609:582,4:582:18358:4:108:0,-166.669,-1641.85 0/0:554:529,6:529:16352:6:234:0,-139.948,-1450.05 0/0:345:328,11:328:10122:11:419:0,-64.2381,-872.855 0/0:393:370,3:370:11468:3:116:0,-101.823,-1021.31 0/0:109:99,5:99:3178:5:192:0,-13.904,-268.671 0/1:87:75,9:75:2370:9:350:-6.3952,0,-188.107 dDocent_Contig_2769 30 . C T 703.097 . AB=0.164062;ABP=253.951;AC=3;AF=0.25;AN=12;AO=45;CIGAR=1X;DP=385;DPB=385;DPRA=1.87654;EPP=100.727;EPPR=741.311;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1771;QR=13473;RO=340;RPL=0;RPP=100.727;RPPR=741.311;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=340;SRP=741.311;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:45,3:45:1765:3:98:0,-5.31293,-149.936 0/1:59:52,7:52:2071:7:280:-7.81049,0,-168.817 0/1:116:88,28:88:3490:28:1115:-65.7138,0,-279.221 0/1:81:74,7:74:2907:7:278:-1.00474,0,-237.358 0/0:19:19,0:19:768:0:0:0,-5.71957,-69.4405 0/0:62:62,0:62:2472:0:0:0,-18.6639,-222.63 dDocent_Contig_2771 98 . N G 194.253 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=190;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:1:0,1:0:0:1:25:-2.49986,-0.30103,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 dDocent_Contig_2772 54 . T C 458.301 . AB=0.154639;ABP=203.995;AC=1;AF=0.0833333;AN=12;AO=32;CIGAR=1X;DP=662;DPB=662;DPRA=3.5865;EPP=72.4974;EPPR=1368.87;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1246;QR=21598;RO=629;RPL=32;RPP=72.4974;RPPR=1368.87;RPR=0;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=629;SRP=1368.87;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:75:75,0:75:2569:0:0:0,-22.5772,-231.437 0/0:67:67,0:67:2304:0:0:0,-20.169,-207.599 0/0:14:14,0:14:456:0:0:0,-4.21442,-41.3478 0/0:81:80,0:80:2743:0:0:0,-24.0824,-246.994 0/1:194:164,30:164:5631:30:1172:-47.353,0,-448.49 0/0:231:229,2:229:7895:2:74:0,-62.5139,-703.52 dDocent_Contig_2773 107 . N T 120.974 . AB=0;ABP=0;AC=6;AF=0.75;AN=8;AO=6;CIGAR=1X;DP=7;DPB=7;DPRA=2;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=121;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:96:-8.87847,-1.20412,0 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 0/0:1:0,0:0:0:0:0:0,0,0 1/1:1:0,1:0:0:1:18:-1.79997,-0.30103,0 dDocent_Contig_2774 78 . G A 147.35 . AB=0.0645161;ABP=105.14;AC=0;AF=0;AN=12;AO=7;CIGAR=3M1X3M;DP=448;DPB=446;DPRA=0.765432;EPP=18.2106;EPPR=925.886;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=271;QR=15850;RO=425;RPL=7;RPP=18.2106;RPPR=925.886;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=425;SRP=925.886;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:45:42,3,0:42:1540:3,0:117,0:0,-2.63597,-127.972,-12.6433,-128.875,-138.494 0|0:59:59,0,0:59:2159:0,0:0,0:0,-17.7608,-194.563,-17.7608,-194.563,-194.563 0|0:162:160,1,0:160:6023:1,0:38,0:0,-45.0533,-538.238,-48.1648,-538.539,-541.656 0|0:58:57,0,0:57:2116:0,0:0,0:0,-17.1587,-190.322,-17.1587,-190.322,-190.322 0|0:62:48,10,4:48:1778:10,4:375,155:-16.2579,0,-142.432,-17.9696,-132.707,-162.22 0|0:62:59,0,3:59:2234:0,3:0,116:0,-17.7608,-200.902,-7.84615,-191.373,-190.47 dDocent_Contig_2775 10 . G A 180.444 . AB=0.107955;ABP=472.937;AC=3;AF=0.25;AN=12;AO=62;CIGAR=1X;DP=789;DPB=789;DPRA=0;EPP=137.642;EPPR=1581.67;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.7276;NS=6;NUMALT=1;ODDS=0;PAIRED=0.983871;PAIREDR=0.995873;PAO=0;PQA=0;PQR=0;PRO=0;QA=2183;QR=26696;RO=727;RPL=0;RPP=137.642;RPPR=1581.67;RPR=62;RUN=1;SAF=62;SAP=137.642;SAR=0;SRF=727;SRP=1581.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:69:66,3:66:2383:3:74:0,-13.8685,-207.74 0/1:88:80,8:80:3006:8:294:-0.314977,0,-244.193 0/1:115:102,13:102:3626:13:491:-9.90598,0,-291.717 0/0:174:166,8:166:6107:8:238:0,-30.6686,-526.263 0/0:194:181,13:181:6739:13:465:0,-16.2261,-564.16 0/1:149:132,17:132:4835:17:621:-11.3588,0,-390.248 dDocent_Contig_2776 49 . C T 58.2093 . AB=0.125;ABP=61.6401;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=384;DPB=384;DPRA=1.26809;EPP=18.2106;EPPR=821.655;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.984085;PAO=0;PQA=0;PQR=0;PRO=0;QA=268;QR=14988;RO=377;RPL=0;RPP=18.2106;RPPR=821.655;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=377;SRP=821.655;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:71:71,0:71:2814:0:0:0,-21.3731,-253.364 0/0:101:100,1:100:3973:1:30:0,-27.4045,-354.55 0/0:51:51,0:51:1990:0:0:0,-15.3525,-179.299 0/0:80:80,0:80:3226:0:0:0,-24.0824,-290.388 0/0:33:33,0:33:1331:0:0:0,-9.93399,-120.051 0/1:48:42,6:42:1654:6:238:-7.3438,0,-134.632 dDocent_Contig_2777 9 . T C 67218.9 . AB=0.475442;ABP=32.3401;AC=6;AF=0.5;AN=12;AO=2662;CIGAR=1X;DP=5599;DPB=5599;DPRA=0;EPP=5783.47;EPPR=6378.45;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999319;PAO=0;PQA=0;PQR=0;PRO=0;QA=93577;QR=102718;RO=2936;RPL=0;RPP=5783.47;RPPR=6378.45;RPR=2662;RUN=1;SAF=2662;SAP=5783.47;SAR=0;SRF=2936;SRP=6378.45;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:841:343,498:343:11927:498:17492:-1320.49,0,-819.944 0/1:875:506,369:506:17705:369:12858:-893.436,0,-1329.4 0/1:681:245,436:245:8645:436:15294:-1170.93,0,-572.893 0/1:913:309,604:309:10784:604:21172:-1629.77,0,-695.453 0/1:1200:838,361:838:29429:361:12794:-789.747,0,-2285.99 0/1:1089:695,394:695:24228:394:13967:-928.741,0,-1851.72 dDocent_Contig_2778 7 . G A 3028.22 . AB=0.281596;ABP=189.868;AC=2;AF=0.166667;AN=12;AO=135;CIGAR=1X;DP=981;DPB=981;DPRA=1.08235;EPP=296.159;EPPR=1794.48;GTI=0;LEN=1;MEANALT=2.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.941818;PAO=0;PQA=0;PQR=0;PRO=0;QA=5162;QR=26200;RO=825;RPL=0;RPP=296.159;RPPR=1794.48;RPR=135;RUN=1;SAF=135;SAP=296.159;SAR=0;SRF=825;SRP=1794.48;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:153:150,0:150:4740:0:0:0,-45.1545,-426.557 0/0:136:133,1:133:4324:1:39:0,-36.7512,-385.546 0/0:110:104,4:104:3352:4:155:0,-18.3882,-287.605 0/0:131:122,3:122:3818:3:87:0,-29.7589,-335.736 0/1:242:155,83:155:4958:83:3204:-216.713,0,-374.518 0/1:209:161,44:161:5008:44:1677:-89.331,0,-388.962 dDocent_Contig_2779 11 . T A 645.226 . AB=0.148734;ABP=341.678;AC=2;AF=0.166667;AN=12;AO=60;CIGAR=1X;DP=1037;DPB=1037;DPRA=1.3257;EPP=133.299;EPPR=2124.54;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.998976;PAO=0;PQA=0;PQR=0;PRO=0;QA=2295;QR=37435;RO=977;RPL=0;RPP=133.299;RPPR=2124.54;RPR=60;RUN=1;SAF=60;SAP=133.299;SAR=0;SRF=977;SRP=2124.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:204:195,9:195:7471:9:331:0,-31.2792,-641.993 0/0:233:229,4:229:8634:4:161:0,-55.2645,-761.843 0/0:176:176,0:176:6772:0:0:0,-52.9813,-609.249 0/0:108:108,0:108:4139:0:0:0,-32.5112,-372.511 0/1:177:159,18:159:6192:18:667:-7.06294,0,-503.823 0/1:139:110,29:110:4227:29:1136:-60.6816,0,-338.585 dDocent_Contig_2781 121 . C G 11022.3 . AB=0.778195;ABP=181.822;AC=8;AF=0.666667;AN=12;AO=388;CIGAR=1X;DP=447;DPB=447;DPRA=0;EPP=845.542;EPPR=131.127;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13199;QR=1997;RO=59;RPL=0;RPP=845.542;RPPR=131.127;RPR=388;RUN=1;SAF=0;SAP=845.542;SAR=388;SRF=0;SRP=131.127;SRR=59;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:73:19,54:19:635:54:1867:-146.338,0,-35.4899 0/1:54:15,39:15:506:39:1337:-104.373,0,-29.6065 0/1:38:7,31:7:238:31:1066:-84.809,0,-10.3136 0/1:101:18,83:18:618:83:2839:-225.356,0,-25.5391 1/1:103:0,103:0:0:103:3481:-313.517,-31.0061,0 1/1:78:0,78:0:0:78:2609:-235.059,-23.4803,0 dDocent_Contig_2782 75 . C T 925.005 . AB=0.168675;ABP=398.715;AC=1;AF=0.0833333;AN=12;AO=179;CIGAR=1X;DP=2868;DPB=2868;DPRA=1.35511;EPP=391.704;EPPR=5833.41;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999255;PAO=0;PQA=0;PQR=0;PRO=0;QA=6185;QR=94510;RO=2685;RPL=179;RPP=391.704;RPPR=5833.41;RPR=0;RUN=1;SAF=179;SAP=391.704;SAR=0;SRF=2685;SRP=5833.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:528:527,0:527:18389:0:0:0,-158.643,-1654.28 0/0:667:616,50:616:21513:50:1708:0,-46.5662,-1781.69 0/1:415:345,70:345:12234:70:2430:-94.0234,0,-975.975 0/0:583:550,32:550:19487:32:1110:0,-75.3351,-1653.17 0/0:245:245,0:245:8680:0:0:0,-73.7523,-781.194 0/0:430:402,27:402:14207:27:937:0,-44.8689,-1193.74 dDocent_Contig_2783 7 . G A 1842.23 . AB=0.203463;ABP=355.879;AC=2;AF=0.166667;AN=12;AO=98;CIGAR=1X;DP=1204;DPB=1204;DPRA=1.74194;EPP=215.815;EPPR=2337.34;GTI=0;LEN=1;MEANALT=2.2;MQM=58.949;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3736;QR=34410;RO=1075;RPL=0;RPP=215.815;RPPR=2337.34;RPR=98;RUN=1;SAF=98;SAP=215.815;SAR=0;SRF=1075;SRP=2337.34;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:124:123,0:123:3893:0:0:0,-37.0267,-350.308 0/0:228:218,2:218:6976:2:78:0,-59.1661,-620.62 0/0:226:219,1:219:7125:1:11:0,-65.2475,-640.054 0/0:164:156,1:156:4995:1:39:0,-43.7284,-445.909 0/1:230:192,34:192:6105:34:1303:-48.4794,0,-481.323 0/1:232:167,60:167:5316:60:2305:-138.965,0,-410.029 dDocent_Contig_2784 18 . C A 10845.6 . AB=0.497959;ABP=3.03689;AC=6;AF=0.5;AN=12;AO=366;CIGAR=1X;DP=735;DPB=735;DPRA=0;EPP=797.769;EPPR=804.284;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997268;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=14624;QR=14857;RO=369;RPL=0;RPP=797.769;RPPR=804.284;RPR=366;RUN=1;SAF=366;SAP=797.769;SAR=0;SRF=369;SRP=804.284;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:139:63,76:63:2527:76:3015:-229.597,0,-185.72 0/1:177:113,64:113:4556:64:2559:-177.155,0,-356.667 0/1:117:54,63:54:2170:63:2515:-191.267,0,-160.246 0/1:100:71,29:71:2866:29:1172:-75.6509,0,-227.918 0/1:96:23,73:23:931:73:2916:-233.645,0,-55.1938 0/1:106:45,61:45:1807:61:2447:-188.467,0,-130.933 dDocent_Contig_2785 11 . C G 9447.92 . AB=0.21696;ABP=1545.69;AC=4;AF=0.333333;AN=12;AO=603;CIGAR=1X;DP=3912;DPB=3912;DPRA=0;EPP=1312.41;EPPR=7181.9;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=0.998342;PAIREDR=0.99879;PAO=0;PQA=0;PQR=0;PRO=0;QA=22467;QR=124535;RO=3306;RPL=0;RPP=1312.41;RPPR=7181.9;RPR=603;RUN=1;SAF=603;SAP=1312.41;SAR=0;SRF=3306;SRP=7181.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:483:355,128:355:13250:128:4747:-281.812,0,-1046.4 0/1:535:460,75:460:17255:75:2859:-96.3975,0,-1390.82 0/1:566:506,60:506:19131:60:2237:-31.1463,0,-1550.13 0/1:633:415,218:415:15558:218:8150:-542.659,0,-1208.75 0/0:892:821,70:821:31088:70:2526:0,-40.7966,-2568.16 0/0:803:749,52:749:28253:52:1948:0,-65.9981,-2365.21 dDocent_Contig_2786 74 . A G 7835.23 . AB=0.282641;ABP=556.182;AC=6;AF=0.5;AN=12;AO=381;CIGAR=1X;DP=1348;DPB=1348;DPRA=0;EPP=830.341;EPPR=2100.65;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13323;QR=34888;RO=966;RPL=381;RPP=830.341;RPPR=2100.65;RPR=0;RUN=1;SAF=381;SAP=830.341;SAR=0;SRF=966;SRP=2100.65;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:202:140,62:140:4913:62:2182:-135.834,0,-381.502 0/1:295:215,79:215:7611:79:2754:-159.219,0,-596.153 0/1:174:108,66:108:3988:66:2315:-156.221,0,-306.659 0/1:283:221,62:221:8169:62:2108:-104.781,0,-649.842 0/1:164:128,36:128:4485:36:1284:-66.4898,0,-354.437 0/1:230:154,76:154:5722:76:2680:-172.2,0,-445.744 dDocent_Contig_2787 18 . A G 13123.7 . AB=0.363636;ABP=219.763;AC=5;AF=0.416667;AN=12;AO=508;CIGAR=1X;DP=1703;DPB=1703;DPRA=0;EPP=1106.12;EPPR=2593.58;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=19968;QR=47714;RO=1193;RPL=0;RPP=1106.12;RPPR=2593.58;RPR=508;RUN=1;SAF=508;SAP=1106.12;SAR=0;SRF=1193;SRP=2593.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:154:60,94:60:2394:94:3694:-286.131,0,-169.253 0/1:240:122,118:122:4866:118:4636:-344.927,0,-365.58 0/1:335:187,147:187:7497:147:5696:-411.54,0,-573.4 0/1:200:110,89:110:4417:89:3572:-261.24,0,-337.197 0/1:413:373,40:373:14940:40:1576:-17.7511,0,-1219.11 0/0:361:341,20:341:13600:20:794:0,-36.8962,-1151.22 dDocent_Contig_2788 98 . N G 608.963 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=19;CIGAR=1X;DP=19;DPB=19;DPRA=0;EPP=44.2683;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=660;QR=0;RO=0;RPL=19;RPP=44.2683;RPPR=0;RPR=0;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:138:-12.7604,-1.20412,0 ./.:.:.:.:.:.:.:. 1/1:6:0,6:0:0:6:210:-19.2425,-1.80618,0 1/1:9:0,9:0:0:9:312:-28.4161,-2.70927,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_2789 11 . G A 45767.6 . AB=0.445338;ABP=35.2961;AC=8;AF=0.666667;AN=12;AO=1475;CIGAR=1X;DP=2174;DPB=2174;DPRA=0;EPP=3205.93;EPPR=1520.87;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=55483;QR=26756;RO=699;RPL=0;RPP=3205.93;RPPR=1520.87;RPR=1475;RUN=1;SAF=1475;SAP=3205.93;SAR=0;SRF=699;SRP=1520.87;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:268:155,113:155:5893:113:4169:-294.557,0,-449.564 0/1:360:174,186:174:6667:186:6935:-515.576,0,-491.458 0/1:294:154,140:154:5952:140:5400:-397.379,0,-447.012 0/1:322:207,115:207:7887:115:4325:-292.32,0,-612.598 1/1:447:0,447:0:0:447:16786:-1509.68,-134.56,0 1/1:483:9,474:9:357:474:17868:-1574.47,-112.907,0 dDocent_Contig_2790 45 . G A 15173 . AB=0.477585;ABP=7.78039;AC=6;AF=0.5;AN=12;AO=522;CIGAR=1X;DP=1093;DPB=1093;DPRA=0;EPP=1136.52;EPPR=1234.25;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992995;PAO=0;PQA=0;PQR=0;PRO=0;QA=20636;QR=22527;RO=571;RPL=0;RPP=1136.52;RPPR=1234.25;RPR=522;RUN=1;SAF=522;SAP=1136.52;SAR=0;SRF=571;SRP=1242.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:151:48,103:48:1913:103:4042:-318.314,0,-126.915 0/1:204:83,121:83:3310:121:4775:-368.259,0,-236.543 0/1:186:97,89:97:3833:89:3556:-264.08,0,-288.99 0/1:199:86,113:86:3349:113:4390:-335.173,0,-241.571 0/1:186:152,34:152:6018:34:1371:-67.6555,0,-485.421 0/1:167:105,62:105:4104:62:2502:-175.041,0,-319.084 dDocent_Contig_2791 7 . A G 9458.19 . AB=0.266443;ABP=989.95;AC=6;AF=0.5;AN=12;AO=555;CIGAR=1X;DP=2083;DPB=2083;DPRA=0;EPP=1190.87;EPPR=3262.39;GTI=0;LEN=1;MEANALT=2.16667;MQM=59.5009;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.843243;PAIREDR=0.92938;PAO=0;PQA=0;PQR=0;PRO=0;QA=17524;QR=57075;RO=1501;RPL=0;RPP=1208.18;RPPR=3262.39;RPR=555;RUN=1;SAF=553;SAP=1190.87;SAR=2;SRF=1501;SRP=3262.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:251:160,84:160:6034:84:2575:-158.216,0,-469.4 0/1:450:303,142:303:11553:142:4585:-278.603,0,-905.212 0/1:190:121,68:121:4628:68:2135:-135.326,0,-359.561 0/1:376:237,131:237:8948:131:4171:-264.529,0,-694.137 0/1:426:371,54:371:14112:54:1696:-24.8284,0,-1141.41 0/1:390:309,76:309:11800:76:2362:-95.5382,0,-945.499 dDocent_Contig_2792 17 . T C 182.02 . AB=0.15942;ABP=72.5289;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=340;DPB=340;DPRA=1.41011;EPP=42.0968;EPPR=702.224;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.97205;PAO=0;PQA=0;PQR=0;PRO=0;QA=723;QR=12860;RO=322;RPL=0;RPP=42.0968;RPPR=702.224;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=322;SRP=702.224;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:76:72,4:72:2865:4:156:0,-8.46235,-243.547 0/0:69:67,2:67:2675:2:81:0,-13.0853,-233.188 0/0:37:36,1:36:1455:1:40:0,-7.14243,-127.196 0/1:69:58,11:58:2348:11:446:-19.7249,0,-190.697 0/0:35:35,0:35:1360:0:0:0,-10.536,-122.657 0/0:54:54,0:54:2157:0:0:0,-16.2556,-194.31 dDocent_Contig_2793 16 . T G 483.227 . AB=0.189781;ABP=117.528;AC=3;AF=0.25;AN=12;AO=33;CIGAR=1X;DP=398;DPB=398;DPRA=0.637895;EPP=74.6689;EPPR=793.426;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.983516;PAO=0;PQA=0;PQR=0;PRO=0;QA=1321;QR=14492;RO=364;RPL=0;RPP=74.6689;RPPR=793.426;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=364;SRP=793.426;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:43:37,6:37:1483:6:242:-9.21266,0,-120.772 0/0:95:95,0:95:3768:0:0:0,-28.5978,-339.138 0/1:40:32,8:32:1281:8:324:-17.4876,0,-103.517 0/1:54:42,12:42:1683:12:475:-26.8443,0,-135.442 0/0:103:99,4:99:3941:4:157:0,-16.4978,-340.182 0/0:63:59,3:59:2336:3:123:0,-7.58623,-198.939 dDocent_Contig_2794 16 . T C 11896.1 . AB=0.213439;ABP=1807.56;AC=5;AF=0.416667;AN=12;AO=599;CIGAR=1X;DP=3283;DPB=3283;DPRA=0;EPP=1303.72;EPPR=5822.56;GTI=0;LEN=1;MEANALT=1.33333;MQM=59.9499;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999627;PAO=0;PQA=0;PQR=0;PRO=0;QA=24162;QR=107776;RO=2680;RPL=0;RPP=1303.72;RPPR=5822.56;RPR=599;RUN=1;SAF=599;SAP=1303.72;SAR=0;SRF=2680;SRP=5822.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:465:297,168:297:11931:168:6802:-471.601,0,-932.933 0/1:546:408,136:408:16378:136:5472:-328.139,0,-1308.51 0/1:445:325,120:325:13111:120:4838:-301.338,0,-1044.99 0/1:366:315,49:315:12661:49:1966:-67.1456,0,-1028.55 0/0:753:694,59:694:27879:59:2377:0,-12.5996,-2292.43 0/1:708:641,67:641:25816:67:2707:-30.6106,0,-2107.88 dDocent_Contig_2795 98 . N G 75.5954 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:81:-7.559,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_2796 34 . T C 153.342 . AB=0.106383;ABP=319.26;AC=3;AF=0.25;AN=12;AO=31;CIGAR=1X;DP=647;DPB=647;DPRA=0;EPP=70.3259;EPPR=1321.15;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993496;PAO=0;PQA=0;PQR=0;PRO=0;QA=1220;QR=24282;RO=615;RPL=0;RPP=70.3259;RPPR=1338.47;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=613;SRP=1321.15;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:75:68,7:68:2717:7:275:-2.54018,0,-222.078 0/1:75:65,10:65:2573:10:403:-14.053,0,-209.133 0/0:156:153,3:153:6032:3:120:0,-35.7734,-531.483 0/1:85:76,8:76:2998:8:325:-3.94167,0,-244.248 0/0:155:154,1:154:6034:1:40:0,-42.664,-538.875 0/0:101:99,2:99:3928:2:57:0,-24.9942,-348.119 dDocent_Contig_2797 26 . C A 66846.9 . AB=0.78376;ABP=1587.82;AC=7;AF=0.583333;AN=12;AO=2072;CIGAR=1X;DP=2562;DPB=2562;DPRA=0;EPP=4502.3;EPPR=1060.52;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=82017;QR=19663;RO=487;RPL=0;RPP=4502.3;RPPR=1060.52;RPR=2072;RUN=1;SAF=2072;SAP=4502.3;SAR=0;SRF=487;SRP=1060.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:444:98,344:98:3953:344:13672:-1096.05,0,-222.306 0/1:582:145,436:145:5829:436:17258:-1376.89,0,-349.398 0/1:351:83,268:83:3368:268:10679:-854.752,0,-197.49 0/1:461:107,354:107:4323:354:13967:-1117.25,0,-250.228 1/1:296:0,296:0:0:296:11691:-1051.41,-89.1049,0 0/1:428:54,374:54:2190:374:14750:-1197.56,0,-68.4194 dDocent_Contig_2798 74 . G T 4896.48 . AB=0.355677;ABP=135.262;AC=4;AF=0.333333;AN=12;AO=266;CIGAR=1X;DP=896;DPB=896;DPRA=0;EPP=580.622;EPPR=1371.04;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8148;QR=21078;RO=630;RPL=266;RPP=580.622;RPPR=1371.04;RPR=0;RUN=1;SAF=266;SAP=580.622;SAR=0;SRF=630;SRP=1371.04;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:118:78,40:78:2581:40:1239:-76.272,0,-197.023 0/1:201:119,82:119:3953:82:2523:-166.82,0,-295.477 0/1:234:160,74:160:5408:74:2326:-139.164,0,-416.449 0/1:178:114,64:114:3859:64:1866:-114.614,0,-293.944 0/0:87:83,4:83:2734:4:129:0,-14.2599,-234.381 0/0:78:76,2:76:2543:2:65:0,-17.3071,-222.954 dDocent_Contig_2799 1 . N G 156.772 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=162;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:121:-11.2802,-0.90309,0 ./.:.:.:.:.:.:.:. dDocent_Contig_2800 18 . C G 940.178 . AB=0.195021;ABP=197.713;AC=2;AF=0.166667;AN=12;AO=54;CIGAR=1X;DP=925;DPB=925;DPRA=0.477656;EPP=120.27;EPPR=1885.68;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99654;PAO=0;PQA=0;PQR=0;PRO=0;QA=2165;QR=34685;RO=867;RPL=0;RPP=120.27;RPPR=1885.68;RPR=54;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=867;SRP=1885.68;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:123:120,3:120:4821:3:122:0,-25.6542,-422.41 0/1:181:147,33:147:5945:33:1315:-64.0197,0,-480.202 0/1:60:46,14:46:1859:14:566:-33.2199,0,-149.448 0/0:100:97,3:97:3898:3:121:0,-18.8228,-339.513 0/0:188:187,1:187:7400:1:41:0,-52.4991,-661.534 0/0:273:270,0:270:10762:0:0:0,-81.2781,-967.524 dDocent_Contig_2805 24 . G A 147.383 . AB=0.127451;ABP=125.975;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=418;DPB=418;DPRA=1.61392;EPP=31.2394;EPPR=882.457;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=518;QR=15911;RO=405;RPL=0;RPP=31.2394;RPPR=882.457;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=405;SRP=882.457;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:54,0:54:2128:0:0:0,-16.2556,-191.698 0/0:32:32,0:32:1252:0:0:0,-9.63296,-112.951 0/0:80:80,0:80:3171:0:0:0,-24.0824,-285.456 0/0:42:42,0:42:1642:0:0:0,-12.6433,-148.007 0/0:108:108,0:108:4213:0:0:0,-32.5112,-379.138 0/1:102:89,13:89:3505:13:518:-16.2612,0,-284.779 dDocent_Contig_2806 18 . G A 11904 . AB=0.292156;ABP=610.498;AC=5;AF=0.416667;AN=12;AO=478;CIGAR=1X;DP=1843;DPB=1843;DPRA=0;EPP=1040.97;EPPR=2967.07;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=18937;QR=53770;RO=1365;RPL=0;RPP=1040.97;RPPR=2967.07;RPR=478;RUN=1;SAF=478;SAP=1040.97;SAR=0;SRF=1365;SRP=2967.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:346:265,81:265:10465:81:3211:-184.907,0,-837.058 0/1:383:259,124:259:10122:124:4868:-322.747,0,-795.084 0/1:284:190,94:190:7385:94:3772:-253.993,0,-578.829 0/1:488:346,142:346:13735:142:5616:-358.388,0,-1088.27 0/0:224:219,5:219:8651:5:194:0,-49.6013,-760.297 0/1:118:86,32:86:3412:32:1276:-79.5869,0,-271.605 dDocent_Contig_2807 1 . N G 68.1232 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=76;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:76:-6.81123,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_2808 105 . N T 319.054 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=10;CIGAR=3X;DP=10;DPB=10;DPRA=0;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=338;QR=0;RO=0;RPL=0;RPP=24.725;RPPR=0;RPR=10;RUN=1;SAF=0;SAP=24.725;SAR=10;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 .:.:.:.:.:.:.:. 1|1:5:0,5:0:0:5:168:-15.4513,-1.50515,0 1|1:3:0,3:0:0:3:101:-9.42373,-0.90309,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_2809 54 . T G 23564.9 . AB=0.610401;ABP=119.041;AC=7;AF=0.583333;AN=12;AO=881;CIGAR=1X;DP=1308;DPB=1308;DPRA=0;EPP=1916.08;EPPR=917.2;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=29927;QR=12313;RO=421;RPL=881;RPP=1916.08;RPPR=917.2;RPR=0;RUN=1;SAF=881;SAP=1916.08;SAR=0;SRF=421;SRP=917.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:134:81,53:81:2330:53:1740:-116.537,0,-169.613 0/1:199:68,130:68:1999:130:4459:-341.564,0,-120.229 0/1:104:60,43:60:1847:43:1486:-102.954,0,-135.423 0/1:266:119,144:119:3439:144:4910:-362.709,0,-230.369 0/1:393:93,299:93:2698:299:10149:-795.358,0,-124.99 1/1:212:0,212:0:0:212:7183:-646.591,-63.8184,0 dDocent_Contig_2810 38 . G A 48.6917 . AB=0.122449;ABP=63.6786;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=146;DPB=146;DPRA=1.325;EPP=20.3821;EPPR=302.673;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.375;PAIREDR=0.731884;PAO=0;PQA=0;PQR=0;PRO=0;QA=305;QR=5406;RO=138;RPL=0;RPP=20.3821;RPPR=302.673;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=138;SRP=302.673;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:27:24,3:24:891:3:122:-3.24468,0,-72.3545 0/0:39:38,1:38:1490:1:41:0,-7.6456,-130.26 0/0:18:17,1:17:681:1:19:0,-3.51857,-59.7186 0/1:22:19,3:19:761:3:123:-4.84213,0,-62.1899 0/0:20:20,0:20:804:0:0:0,-6.0206,-72.6778 0/0:20:20,0:20:779:0:0:0,-6.0206,-70.4195 dDocent_Contig_2811 16 . G A 3218.98 . AB=0.259615;ABP=264.005;AC=2;AF=0.166667;AN=12;AO=138;CIGAR=1X;DP=1505;DPB=1505;DPRA=1.08421;EPP=302.673;EPPR=2971.41;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5450;QR=53995;RO=1367;RPL=0;RPP=302.673;RPPR=2971.41;RPR=138;RUN=1;SAF=138;SAP=302.673;SAR=0;SRF=1367;SRP=2971.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:216:216,0:216:8533:0:0:0,-65.0225,-767.54 0/0:266:264,2:264:10405:2:82:0,-72.2943,-928.044 0/0:244:243,1:243:9689:1:19:0,-71.5513,-869.513 0/0:259:259,0:259:10157:0:0:0,-77.9668,-913.556 0/1:232:157,75:157:6195:75:3003:-200.515,0,-487.488 0/1:288:228,60:228:9016:60:2346:-124.605,0,-724.24 dDocent_Contig_2812 188 . C T 1092.01 . AB=0.160377;ABP=427.799;AC=5;AF=0.416667;AN=12;AO=68;CIGAR=1X;DP=515;DPB=515;DPRA=0.931868;EPP=150.67;EPPR=971.487;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.867647;PAIREDR=0.899103;PAO=0;PQA=0;PQR=0;PRO=0;QA=2715;QR=17691;RO=446;RPL=68;RPP=150.67;RPPR=971.487;RPR=0;RUN=1;SAF=0;SAP=150.67;SAR=68;SRF=0;SRP=971.487;SRR=446;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:66:48,18:48:1910:18:729:-46.0671,0,-152.231 0/1:88:75,13:75:3001:13:516:-20.2899,0,-243.684 0/1:95:82,13:82:3247:13:515:-18.0981,0,-263.688 0/1:88:73,15:73:2837:15:593:-27.213,0,-228.954 0/0:91:90,0:90:3583:0:0:0,-27.0927,-322.398 0/1:87:78,9:78:3113:9:362:-6.75495,0,-254.058 dDocent_Contig_2813 98 . N G 153.968 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=158;QR=0;RO=0;RPL=7;RPP=18.2106;RPPR=0;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:102:-9.43334,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:23:-2.18499,-0.60206,0 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 dDocent_Contig_2814 15 . A G 1430.39 . AB=0.219269;ABP=209.055;AC=2;AF=0.166667;AN=12;AO=66;CIGAR=1X;DP=643;DPB=643;DPRA=1.76023;EPP=146.327;EPPR=1255.95;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2626;QR=22867;RO=577;RPL=0;RPP=146.327;RPPR=1255.95;RPR=66;RUN=1;SAF=66;SAP=146.327;SAR=0;SRF=577;SRP=1255.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1627:0:0:0,-12.3422,-146.667 0/0:124:124,0:124:4923:0:0:0,-37.3277,-442.975 0/0:71:71,0:71:2808:0:0:0,-21.3731,-252.829 0/0:106:106,0:106:4154:0:0:0,-31.9092,-373.867 0/1:126:103,23:103:4130:23:909:-44.1825,0,-333.743 0/1:175:132,43:132:5225:43:1717:-102.078,0,-417.449 dDocent_Contig_2815 7 . C G 20976.4 . AB=0.69556;ABP=317.254;AC=8;AF=0.666667;AN=12;AO=844;CIGAR=1X2M;DP=1148;DPB=1148;DPRA=0;EPP=1835.73;EPPR=543.707;GTI=0;LEN=1;MEANALT=3.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=5.55112e-17;PAIRED=0.998815;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=26637;QR=9455;RO=249;RPL=0;RPP=1835.73;RPPR=543.707;RPR=844;RUN=1;SAF=844;SAP=1835.73;SAR=0;SRF=249;SRP=543.707;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:68:0,0,64:0:0:0,64:0,2176:-195.921,-195.921,-195.921,-19.2659,-19.2659,0 0|1:197:21,24,147:21:794:24,147:754,4538:-357.667,-303.382,-361.249,0,-4.52589,-20.8687 1|1:134:6,0,122:6:229:0,122:0,3966:-336.184,-337.991,-356.782,-17.8292,-36.7257,0 0|1:197:22,0,166:22:839:0,166:0,5273:-417.883,-424.505,-493.344,0,-68.9912,-19.0202 0|1:211:62,0,148:62:2354:0,148:0,4607:-351.258,-369.922,-562.98,0,-193.165,-148.613 0|1:341:138,0,197:138:5239:0,197:0,6077:-445.947,-487.49,-917.13,0,-429.82,-370.517 dDocent_Contig_2816 11 . C T 21153.9 . AB=0.0402893;ABP=5333.66;AC=6;AF=0.5;AN=12;AO=117;CIGAR=1X3M;DP=5519;DPB=5519;DPRA=0;EPP=257.073;EPPR=8493.47;GTI=0;LEN=1;MEANALT=4.66667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=4.44089e-16;PAIRED=1;PAIREDR=0.998721;PAO=0;PQA=0;PQR=0;PRO=0;QA=3718;QR=150188;RO=3910;RPL=0;RPP=257.073;RPPR=8493.47;RPR=117;RUN=1;SAF=117;SAP=257.073;SAR=0;SRF=3910;SRP=8493.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:803:610,137,0,55:610:23252:137,0,55:4996,0,2106:-224.473,0,-1865.96,-408.101,-1907.2,-2315.31,-235.291,-1734.39,-2142.5,-2125.95 0|1:1009:746,159,0,102:746:28620:159,0,102:5752,0,3902:-244.92,0,-2301.04,-469.488,-2348.91,-2818.4,-149.322,-2028.75,-2498.24,-2467.54 0|1:668:338,253,1,75:338:13157:253,1,75:9238,38,2880:-652.967,0,-1005.08,-751.599,-1078.13,-1832.55,-518.348,-844.882,-1596.48,-1577.02 0|1:803:551,194,0,55:551:21250:194,0,55:6972,0,2094:-402.818,0,-1686.48,-568.685,-1744.88,-2313.57,-396.954,-1573.15,-2141.84,-2125.28 0|1:1147:842,138,102,62:842:32306:138,102,62:4998,3216,2330:-154.542,0,-2609.96,-149.396,-2392.88,-2770.16,-217.147,-2460.64,-2610.02,-2849.97 0|1:1089:823,233,14,18:823:31603:233,14,18:8503,464,689:-446.897,0,-2523.81,-657.118,-2556.42,-3246.84,-638.11,-2537.41,-3194.52,-3226.63 dDocent_Contig_2817 106 . N T 1332.58 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=43;CIGAR=2X;DP=43;DPB=43.5;DPRA=0;EPP=96.3836;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=4.33681e-19;PAIRED=1;PAIREDR=0;PAO=1;PQA=34;PQR=0;PRO=0;QA=1463;QR=0;RO=0;RPL=0;RPP=96.3836;RPPR=0;RPR=43;RUN=1;SAF=0;SAP=96.3836;SAR=43;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:17:0,17:0:0:17:579:-52.4326,-5.11751,0 1|1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 1|1:1:0,1:0:0:1:35:-3.15375,-0.30103,0 1|1:23:0,23:0:0:23:780:-70.5158,-6.92369,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_2818 7 . A G 102886 . AB=0.794867;ABP=3945.95;AC=6;AF=0.5;AN=12;AO=4150;CIGAR=1X;DP=5221;DPB=5221;DPRA=0;EPP=9014.62;EPPR=1955.16;GTI=0;LEN=1;MEANALT=3;MQM=59.9899;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=131408;QR=34003;RO=899;RPL=0;RPP=9014.62;RPPR=1955.16;RPR=4150;RUN=1;SAF=4150;SAP=9014.62;SAR=0;SRF=899;SRP=1955.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:611:97,501:97:3656:501:15868:-1247.56,0,-148.975 0/1:824:125,673:125:4759:673:21482:-1692.3,0,-187.918 0/1:493:61,416:61:2273:416:13185:-1042.61,0,-60.9995 0/1:940:91,813:91:3498:813:25472:-2019.37,0,-42.6152 0/1:1197:214,942:214:8070:942:29706:-2324.38,0,-377.941 0/1:1156:311,805:311:11747:805:25695:-1973.62,0,-720.591 dDocent_Contig_2819 34 . C A 104.393 . AB=0.128571;ABP=86.8912;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=491;DPB=491;DPRA=1.20915;EPP=42.0968;EPPR=1030.12;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.980973;PAO=0;PQA=0;PQR=0;PRO=0;QA=700;QR=18847;RO=473;RPL=0;RPP=42.0968;RPPR=1030.12;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=473;SRP=1030.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:77:77,0:77:3032:0:0:0,-23.1793,-272.975 0/0:115:106,9:106:4256:9:337:0,-3.9436,-352.32 0/0:62:62,0:62:2458:0:0:0,-18.6639,-221.356 0/0:98:98,0:98:3924:0:0:0,-29.5009,-353.147 0/0:69:69,0:69:2766:0:0:0,-20.7711,-249.054 0/1:70:61,9:61:2411:9:363:-11.9622,0,-196.079 dDocent_Contig_2820 12 . A C 74264.9 . AB=0.562068;ABP=153.155;AC=6;AF=0.5;AN=12;AO=2522;CIGAR=1X;DP=4487;DPB=4487;DPRA=0;EPP=5479.46;EPPR=4265.61;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=97719;QR=69710;RO=1963;RPL=0;RPP=5479.46;RPPR=4265.61;RPR=2522;RUN=1;SAF=2522;SAP=5479.46;SAR=0;SRF=1963;SRP=4265.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:717:348,369:348:12175:369:14331:-1073.02,0,-879.621 0/1:746:443,303:443:15747:303:11786:-835.487,0,-1192.11 0/1:655:348,305:348:12546:305:11718:-857.045,0,-931.853 0/1:828:176,652:176:6178:652:25336:-2029.07,0,-306.782 0/1:821:292,529:292:10370:529:20420:-1589.2,0,-685.919 0/1:720:356,364:356:12694:364:14128:-1053.89,0,-925.351 dDocent_Contig_2822 7 . T G 44703.5 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=1593;CIGAR=1X;DP=1660;DPB=1660;DPRA=0;EPP=3453.49;EPPR=128.956;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997489;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=50501;QR=825;RO=58;RPL=0;RPP=3462.17;RPPR=128.956;RPR=1593;RUN=1;SAF=1592;SAP=3453.49;SAR=1;SRF=58;SRP=128.956;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:264:11,253:11:152:253:8038:-709.555,-65.6548,0 1/1:293:13,277:13:209:277:8641:-758.65,-68.5238,0 1/1:396:17,376:17:249:376:12152:-1070.87,-95.9098,0 1/1:304:3,301:3:33:301:9520:-853.592,-88.4331,0 1/1:170:4,166:4:56:166:5204:-463.269,-45.9952,0 1/1:233:10,220:10:126:220:6946:-613.636,-58.0231,0 dDocent_Contig_2823 103 . N A 193.147 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=6;CIGAR=5X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=197;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:3:0,3:0:0:3:98:-9.14423,-0.90309,0 1|1:2:0,2:0:0:2:66:-6.26831,-0.60206,0 .:.:.:.:.:.:.:. dDocent_Contig_2824 98 . N A 114.421 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=112;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:47:-4.46457,-0.60206,0 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 dDocent_Contig_2825 15 . A C 219.773 . AB=0.173913;ABP=66.7383;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=419;DPB=419;DPRA=1.21693;EPP=42.0968;EPPR=873.771;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.9601;PAO=0;PQA=0;PQR=0;PRO=0;QA=722;QR=15985;RO=401;RPL=0;RPP=42.0968;RPPR=873.771;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=401;SRP=873.771;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:61:61,0:61:2443:0:0:0,-18.3628,-220.02 0/0:104:101,3:101:4009:3:117:0,-20.3985,-349.899 0/0:46:46,0:46:1817:0:0:0,-13.8474,-163.749 0/0:82:82,0:82:3299:0:0:0,-24.6845,-296.963 0/1:69:57,12:57:2274:12:488:-23.5002,0,-184.053 0/0:57:54,3:54:2143:3:117:0,-6.24901,-182.144 dDocent_Contig_2826 47 . T A 73502.9 . AB=0.0323427;ABP=6522.55;AC=0;AF=0;AN=12;AO=111;CIGAR=1X1M1X2M1X;DP=5370;DPB=5369.83;DPRA=0;EPP=244.044;EPPR=3262.4;GTI=0;LEN=1;MEANALT=9.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4143;QR=53216;RO=1505;RPL=111;RPP=244.044;RPPR=3262.4;RPR=0;RUN=1;SAF=111;SAP=244.044;SAR=0;SRF=1505;SRP=3271.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:865:290,40,292,199:290:10175:40,292,199:1468,10990,7539:-813.152,-780.465,-1596.42,0,-708.004,-740.09,-282.391,-990.397,-209.924,-1050.48 0|0:862:352,0,171,308:352:12445:0,171,308:0,6399,11657:-849.611,-955.574,-1969.08,-431.569,-1445.08,-1393.6,0,-1013.51,-489.498,-920.792 0|0:514:127,3,216,157:127:4475:3,216,157:115,8135,5904:-747.701,-776.493,-1139.88,-119.379,-474.228,-418.644,-302.276,-657.127,0,-619.304 0|0:1053:376,64,287,306:376:13380:64,287,306:2425,10808,11631:-840.616,-754.989,-1826.09,-68.2256,-959.773,-1072.19,0,-891.549,-204.779,-998.249 0|0:1076:169,0,410,487:169:5984:0,410,487:0,15488,18481:-2246.45,-2297.32,-2784.73,-1027.93,-1515.33,-1391.91,-782.017,-1269.42,0,-1122.82 0|0:1000:191,4,279,519:191:6757:4,279,519:135,10479,19679:-1863.98,-1910.54,-2459.65,-1063.1,-1602.46,-1529.42,-308.094,-847.46,0,-702.165 dDocent_Contig_2827 19 . A G 12735 . AB=0.452696;ABP=22.1162;AC=6;AF=0.5;AN=12;AO=445;CIGAR=1X;DP=983;DPB=983;DPRA=0;EPP=969.316;EPPR=1171.26;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=17556;QR=21324;RO=538;RPL=0;RPP=969.316;RPPR=1171.26;RPR=445;RUN=1;SAF=445;SAP=969.316;SAR=0;SRF=538;SRP=1171.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:133:48,85:48:1898:85:3317:-258.562,0,-130.988 0/1:197:103,94:103:4094:94:3750:-278.202,0,-309.147 0/1:210:141,69:141:5613:69:2711:-180.898,0,-441.777 0/1:179:124,55:124:4927:55:2171:-141.679,0,-389.442 0/1:109:45,64:45:1746:64:2569:-198.524,0,-124.546 0/1:155:77,78:77:3046:78:3038:-226.854,0,-227.561 dDocent_Contig_2828 78 . T A 497.703 . AB=0.179487;ABP=211.806;AC=3;AF=0.25;AN=12;AO=51;CIGAR=1X;DP=361;DPB=361;DPRA=0;EPP=113.755;EPPR=673.995;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1662;QR=10171;RO=309;RPL=51;RPP=113.755;RPPR=673.995;RPR=0;RUN=1;SAF=51;SAP=113.755;SAR=0;SRF=309;SRP=673.995;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:34,4:34:1134:4:134:-0.952192,0,-90.9224 0/0:57:52,5:52:1703:5:168:0,-1.70769,-138.102 0/1:125:106,18:106:3504:18:582:-15.2784,0,-278.193 0/1:71:51,20:51:1681:20:653:-37.7072,0,-130.202 0/0:39:38,1:38:1226:1:35:0,-8.24154,-107.134 0/0:31:28,3:28:923:3:90:0,-0.933408,-74.9752 dDocent_Contig_2829 107 . N G 141.237 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=140;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_2830 71 . T G 391.094 . AB=0.247423;ABP=56.7598;AC=3;AF=0.25;AN=12;AO=27;CIGAR=1X;DP=197;DPB=197;DPRA=1.25893;EPP=61.6401;EPPR=372.161;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.925926;PAIREDR=0.911765;PAO=0;PQA=0;PQR=0;PRO=0;QA=911;QR=5963;RO=170;RPL=27;RPP=61.6401;RPPR=372.161;RPR=0;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=170;SRP=372.161;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:49:42,7:42:1456:7:230:-6.27033,0,-116.579 0/0:44:41,3:41:1398:3:105:0,-3.44916,-116.311 0/0:15:15,0:15:548:0:0:0,-4.51545,-49.658 0/0:41:41,0:41:1460:0:0:0,-12.3422,-131.687 0/1:16:12,4:12:436:4:146:-8.68123,0,-34.7651 0/1:32:19,13:19:665:13:430:-29.3796,0,-50.5358 dDocent_Contig_2831 10 . C A 2818.93 . AB=0.22763;ABP=413.473;AC=4;AF=0.333333;AN=12;AO=145;CIGAR=1X;DP=977;DPB=977;DPRA=0.936765;EPP=317.874;EPPR=1807.5;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.99278;PAO=0;PQA=0;PQR=0;PRO=0;QA=5329;QR=30959;RO=831;RPL=0;RPP=317.874;RPPR=1807.5;RPR=145;RUN=1;SAF=145;SAP=317.874;SAR=0;SRF=831;SRP=1807.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:109:95,13:95:3559:13:493:-12.0818,0,-287.786 0/1:160:114,46:114:4295:46:1715:-106.422,0,-338.411 0/1:219:169,50:169:6249:50:1784:-94.866,0,-496.356 0/1:149:113,36:113:4259:36:1337:-75.7454,0,-338.48 0/0:171:171,0:171:6370:0:0:0,-51.4761,-573.155 0/0:169:169,0:169:6227:0:0:0,-50.8741,-560.322 dDocent_Contig_2832 33 . C G 8410.18 . AB=0.311069;ABP=327.936;AC=3;AF=0.25;AN=12;AO=372;CIGAR=1X;DP=2340;DPB=2340;DPRA=0;EPP=810.798;EPPR=4272.13;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=14710;QR=77738;RO=1966;RPL=0;RPP=810.798;RPPR=4272.13;RPR=372;RUN=1;SAF=372;SAP=810.798;SAR=0;SRF=1966;SRP=4272.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:353:336,17:336:13375:17:628:0,-49.425,-1145.94 0/1:337:301,36:301:11920:36:1432:-27.6829,0,-970.555 0/0:530:507,23:507:20028:23:931:0,-75.4543,-1716.8 0/0:409:403,6:403:15874:6:244:0,-100.782,-1405.13 0/1:329:194,133:194:7623:133:5237:-372.376,0,-586.895 0/1:382:225,157:225:8918:157:6238:-446.181,0,-687.123 dDocent_Contig_2833 33 . G A 2636.39 . AB=0.129467;ABP=2038.65;AC=4;AF=0.333333;AN=12;AO=221;CIGAR=1X;DP=2686;DPB=2686;DPRA=0.871808;EPP=482.906;EPPR=5355.69;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8711;QR=96854;RO=2465;RPL=0;RPP=482.906;RPPR=5355.69;RPR=221;RUN=1;SAF=221;SAP=482.906;SAR=0;SRF=2465;SRP=5355.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:338:288,50:288:11233:50:1984:-77.0139,0,-908.589 0/1:512:455,57:455:17828:57:2227:-46.4798,0,-1449.11 0/1:414:349,65:349:13696:65:2550:-105.019,0,-1107.1 0/1:443:394,49:394:15438:49:1950:-42.3483,0,-1254.98 0/0:427:427,0:427:16844:0:0:0,-128.54,-1514.73 0/0:552:552,0:552:21815:0:0:0,-166.169,-1961.6 dDocent_Contig_2835 21 . T C 24314.9 . AB=0.203769;ABP=4330.85;AC=6;AF=0.5;AN=12;AO=1157;CIGAR=1X;DP=5678;DPB=5678;DPRA=0;EPP=2515.4;EPPR=9818.07;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=1;PAIREDR=0.998673;PAO=0;PQA=0;PQR=0;PRO=0;QA=46161;QR=179600;RO=4520;RPL=0;RPP=2515.4;RPPR=9818.07;RPR=1157;RUN=1;SAF=1157;SAP=2515.4;SAR=0;SRF=4520;SRP=9818.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:813:685,128:685:27270:128:5076:-211.967,0,-2207.13 0/1:986:772,214:772:30718:214:8527:-470.14,0,-2465.05 0/1:554:415,139:415:16575:139:5564:-333.8,0,-1323.66 0/1:1076:840,236:840:33256:236:9428:-524.028,0,-2666.14 0/1:1120:874,245:874:34652:245:9821:-546.008,0,-2778.25 0/1:1129:934,195:934:37129:195:7745:-356.773,0,-2998.3 dDocent_Contig_2836 138 . G T 61.5807 . AB=0.150943;ABP=59.0998;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=150;DPB=150;DPRA=1.45902;EPP=22.5536;EPPR=309.188;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0;PAIREDR=0.921986;PAO=0;PQA=0;PQR=0;PRO=0;QA=309;QR=4521;RO=141;RPL=0;RPP=22.5536;RPPR=309.188;RPR=9;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=309.188;SRR=141;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:409:0:0:0,-3.61236,-37.1381 0/1:35:30,5:30:892:5:173:-5.37411,0,-70.0192 0/0:36:35,1:35:1145:1:35:0,-7.33845,-99.8456 0/0:34:34,0:34:1136:0:0:0,-10.235,-102.541 0/0:15:15,0:15:444:0:0:0,-4.51545,-40.2452 0/1:18:15,3:15:495:3:101:-4.00506,0,-39.4475 dDocent_Contig_2837 9 . G T 16236.8 . AB=0.0417559;ABP=1706.56;AC=0;AF=0;AN=12;AO=39;CIGAR=1M1X1M1X3M;DP=934;DPB=934;DPRA=0;EPP=87.6977;EPPR=515.478;GTI=0;LEN=1;MEANALT=5.66667;MQM=59.7949;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1415;QR=8775;RO=236;RPL=0;RPP=87.6977;RPPR=515.478;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=236;SRP=515.478;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:121:25,7,3,78:25:920:7,3,78:221,118,2736:-197.449,-187.216,-260.327,-195.266,-252.725,-269.581,0,-57.4863,-65.5295,-51.7596 0|0:204:59,2,3,130:59:2236:2,3,130:76,114,4489:-340.645,-352.172,-534.895,-349.056,-526.147,-531.477,0,-177.137,-174.021,-144.236 0|0:195:41,18,3,125:41:1520:18,3,125:677,121,4633:-361.133,-318.009,-436.949,-363.5,-432.393,-486.956,0,-68.8933,-114.385,-86.7321 0|0:176:35,8,2,127:35:1282:8,2,127:295,80,4554:-346.46,-332.871,-435.231,-350.405,-431.048,-454.571,0,-80.6952,-98.2317,-66.5933 0|0:124:48,1,3,69:48:1781:1,3,69:32,116,2580:-194.22,-206.092,-351.507,-199.146,-342.285,-343.96,0,-143.133,-136.187,-124.94 0|0:114:28,3,8,75:28:1036:3,8,75:114,300,2546:-194.991,-194.07,-277.912,-178.857,-254.253,-261.194,0,-75.3828,-60.1719,-62.1552 dDocent_Contig_2838 17 . G A 33276.1 . AB=0.859504;ABP=138.844;AC=11;AF=0.916667;AN=12;AO=965;CIGAR=1X;DP=1007;DPB=1007;DPRA=0;EPP=2098.48;EPPR=92.0407;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=38389;QR=1647;RO=41;RPL=0;RPP=2098.48;RPPR=92.0407;RPR=965;RUN=1;SAF=965;SAP=2098.48;SAR=0;SRF=41;SRP=92.0407;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:151:8,143:8:316:143:5677:-481.948,-16.6528,0 1/1:115:7,108:7:283:108:4281:-359.424,-8.77595,0 0/1:121:17,104:17:683:104:4158:-337.767,0,-25.3764 1/1:157:9,148:9:365:148:5879:-495.7,-14.0472,0 1/1:209:0,209:0:0:209:8334:-749.611,-62.9153,0 1/1:254:0,253:0:0:253:10060:-904.377,-76.1606,0 dDocent_Contig_2839 17 . T A 43459.1 . AB=0.705678;ABP=637.216;AC=7;AF=0.583333;AN=12;AO=1218;CIGAR=1X1M1X2M;DP=1726;DPB=1773.8;DPRA=0;EPP=2647.86;EPPR=250.558;GTI=0;LEN=1;MEANALT=5.16667;MQM=59.8342;MQMR=59.3509;NS=6;NUMALT=3;ODDS=0;PAIRED=0.780788;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=48162;QR=4480;RO=114;RPL=0;RPP=2647.86;RPPR=250.558;RPR=1218;RUN=1;SAF=1218;SAP=2647.86;SAR=0;SRF=114;SRP=250.558;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:240:18,12,177,22:18:705:12,177,22:472,7016,850:-583.313,-549.905,-604.262,-11.2736,-30.4173,-15.9628,-519.485,-538.628,0,-570.832 1|0:365:15,28,254,46:15:574:28,254,46:1115,10085,1829:-929.057,-841.782,-880.453,-103.417,-58.7234,-74.0542,-783.06,-738.369,0,-816.313 1|0:279:34,18,173,44:34:1351:18,173,44:713,6840,1715:-580.108,-531.657,-637.466,-27.6792,-80.2222,-86.8313,-451.431,-503.973,0,-549.414 1|0:317:36,21,212,45:36:1416:21,212,45:822,8299,1764:-702.021,-645.274,-752.618,-30.5643,-76.6446,-80.4113,-568.631,-614.713,0,-668.751 1|1:218:7,47,150,14:7:275:47,150,14:1832,5937,534:-614.386,-465.919,-474.39,-127.962,0,-105.427,-573.775,-445.821,-107.866,-592.18 1|0:307:4,7,252,43:4:159:7,252,43:273,9985,1713:-948.248,-927.016,-938,-127.638,-118.294,-64.8697,-808.727,-799.382,0,-808.874 dDocent_Contig_2840 107 . N G 418.533 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=15;CIGAR=1X;DP=15;DPB=15;DPRA=0;EPP=35.5824;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=437;QR=0;RO=0;RPL=0;RPP=35.5824;RPPR=0;RPR=15;RUN=1;SAF=0;SAP=35.5824;SAR=15;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:87:-8.11794,-0.90309,0 1/1:3:0,3:0:0:3:77:-7.18474,-0.90309,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:5:0,5:0:0:5:162:-14.8995,-1.50515,0 1/1:2:0,2:0:0:2:45:-4.27369,-0.60206,0 1/1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 dDocent_Contig_2841 17 . G A 647.016 . AB=0.197605;ABP=135.652;AC=2;AF=0.166667;AN=12;AO=55;CIGAR=1X;DP=601;DPB=601;DPRA=0;EPP=122.441;EPPR=1188.63;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.981685;PAO=0;PQA=0;PQR=0;PRO=0;QA=2191;QR=21704;RO=546;RPL=0;RPP=122.441;RPPR=1188.63;RPR=55;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=546;SRP=1188.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:109:106,3:106:4205:3:119:0,-21.7178,-367.326 0/1:76:60,16:60:2380:16:630:-34.1513,0,-191.473 0/1:91:74,17:74:2938:17:676:-33.7722,0,-237.119 0/0:110:103,7:103:4060:7:283:0,-7.2703,-339.546 0/0:87:82,5:82:3285:5:202:0,-7.62753,-277.152 0/0:128:121,7:121:4836:7:281:0,-12.8702,-409.482 dDocent_Contig_2842 7 . G T 51.6842 . AB=0.114407;ABP=307.789;AC=1;AF=0.0833333;AN=12;AO=69;CIGAR=1X;DP=1236;DPB=1236;DPRA=0;EPP=152.842;EPPR=2515.4;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.956522;PAIREDR=0.951599;PAO=0;PQA=0;PQR=0;PRO=0;QA=1855;QR=36815;RO=1157;RPL=0;RPP=152.842;RPPR=2515.4;RPR=69;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=1157;SRP=2515.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:98:93,2:93:2922:2:30:0,-25.9165,-260.278 0/1:236:206,27:206:6463:27:853:-6.69129,0,-511.357 0/0:316:298,17:298:9459:17:464:0,-52.9348,-809.186 0/0:221:206,13:206:6576:13:326:0,-36.4799,-562.285 0/0:162:156,5:156:5023:5:61:0,-42.9659,-446.544 0/0:203:198,5:198:6372:5:121:0,-49.979,-562.355 dDocent_Contig_2843 84 . T C 29588.6 . AB=0.763303;ABP=331.197;AC=8;AF=0.666667;AN=12;AO=991;CIGAR=1X;DP=1121;DPB=1121;DPRA=0;EPP=2154.94;EPPR=280.959;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.998991;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=34774;QR=4471;RO=128;RPL=991;RPP=2154.94;RPPR=280.959;RPR=0;RUN=1;SAF=991;SAP=2154.94;SAR=0;SRF=128;SRP=280.959;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:84:17,67:17:594:67:2360:-187.374,0,-28.5007 0/1:162:17,145:17:595:145:5084:-408.945,0,-5.1094 0/1:159:39,119:39:1353:119:4154:-326.413,0,-74.4238 0/1:140:54,85:54:1922:85:3013:-229.476,0,-131.33 1/1:294:0,294:0:0:294:10328:-929.463,-88.5028,0 1/1:282:1,281:1:7:281:9835:-884.411,-84.1905,0 dDocent_Contig_2844 52 . T C 107.446 . AB=0.152174;ABP=51.3492;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=349;DPB=349;DPRA=0.759076;EPP=18.2106;EPPR=745.654;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.643275;PAO=0;PQA=0;PQR=0;PRO=0;QA=286;QR=13547;RO=342;RPL=7;RPP=18.2106;RPPR=745.654;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=342;SRP=745.654;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:66:66,0:66:2636:0:0:0,-19.868,-237.374 0/0:68:68,0:68:2708:0:0:0,-20.47,-243.84 0/1:46:39,7:39:1514:7:286:-12.2674,0,-122.657 0/0:61:61,0:61:2411:0:0:0,-18.3628,-217.136 0/0:33:33,0:33:1308:0:0:0,-9.93399,-117.991 0/0:75:75,0:75:2970:0:0:0,-22.5772,-267.406 dDocent_Contig_2845 81 . C T 605.023 . AB=0.22093;ABP=119.361;AC=4;AF=0.333333;AN=12;AO=38;CIGAR=1X;DP=677;DPB=677;DPRA=0.170297;EPP=85.5263;EPPR=1390.58;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1303;QR=21516;RO=639;RPL=38;RPP=85.5263;RPPR=1390.58;RPR=0;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=639;SRP=1390.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:46:36,10:36:1198:10:348:-17.8087,0,-94.269 0/1:46:38,8:38:1292:8:274:-11.1466,0,-102.733 0/1:39:35,4:35:1186:4:139:-1.11252,0,-95.3011 0/1:41:25,16:25:864:16:542:-36.7596,0,-65.735 0/0:196:196,0:196:6574:0:0:0,-59.0019,-591.795 0/0:309:309,0:309:10402:0:0:0,-93.0183,-936.196 dDocent_Contig_2846 80 . G A 133.191 . AB=0.25;ABP=20.3821;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=160;DPB=160;DPRA=0.990654;EPP=22.5536;EPPR=330.903;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.444444;PAIREDR=0.768212;PAO=0;PQA=0;PQR=0;PRO=0;QA=301;QR=5250;RO=151;RPL=9;RPP=22.5536;RPPR=330.903;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=151;SRP=330.903;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:24,8:24:833:8:265:-14.541,0,-65.656 0/0:30:30,0:30:1020:0:0:0,-9.0309,-92.108 0/0:23:23,0:23:811:0:0:0,-6.92369,-73.3112 0/0:21:20,1:20:707:1:36:0,-2.72335,-60.357 0/0:27:27,0:27:935:0:0:0,-8.12781,-84.4621 0/0:27:27,0:27:944:0:0:0,-8.12781,-85.2747 dDocent_Contig_2847 7 . T G 98744.9 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=3494;CIGAR=1X;DP=3626;DPB=3626;DPRA=0;EPP=7590.13;EPPR=246.215;GTI=0;LEN=1;MEANALT=2.66667;MQM=59.581;MQMR=59.8125;NS=6;NUMALT=1;ODDS=0;PAIRED=0.970521;PAIREDR=0.973214;PAO=0;PQA=0;PQR=0;PRO=0;QA=111394;QR=1588;RO=112;RPL=0;RPP=7590.13;RPPR=246.215;RPR=3494;RUN=1;SAF=3494;SAP=7590.13;SAR=0;SRF=112;SRP=246.215;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:540:13,523:13:173:523:16454:-1464.4,-145.791,0 1/1:837:26,804:26:370:804:25606:-2268.84,-216.539,0 1/1:481:15,464:15:207:464:14999:-1329.43,-125.539,0 1/1:691:18,669:18:236:669:21523:-1913.99,-185.639,0 1/1:479:15,463:15:222:463:14633:-1296.03,-123.878,0 1/1:598:25,571:25:380:571:18179:-1600.95,-145.251,0 dDocent_Contig_2848 22 . T A 100457 . AB=0.899015;ABP=564.47;AC=11;AF=0.916667;AN=12;AO=2938;CIGAR=1X;DP=3070;DPB=3070;DPRA=0;EPP=6382.8;EPPR=285.302;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.993533;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=116531;QR=4948;RO=130;RPL=0;RPP=6382.8;RPPR=285.302;RPR=2938;RUN=1;SAF=2938;SAP=6382.8;SAR=0;SRF=130;SRP=285.302;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:406:41,365:41:1531:365:14555:-1186.64,0,-15.8436 1/1:486:12,474:12:459:474:18939:-1661.29,-104.641,0 1/1:307:6,301:6:229:301:11999:-1058.09,-71.4421,0 1/1:648:52,595:52:2000:595:23498:-1932.64,-14.9512,0 1/1:598:3,595:3:118:595:23442:-2096.85,-169.013,0 1/1:625:16,608:16:611:608:24098:-2111.47,-132.633,0 dDocent_Contig_2849 7 . T G 63356.5 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=2202;CIGAR=1X;DP=2285;DPB=2285;DPRA=0;EPP=4784.59;EPPR=163.699;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.772934;PAIREDR=0.864865;PAO=0;PQA=0;PQR=0;PRO=0;QA=71536;QR=1121;RO=74;RPL=0;RPP=4784.59;RPPR=163.699;RPR=2202;RUN=1;SAF=2202;SAP=4784.59;SAR=0;SRF=74;SRP=163.699;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:309:11,296:11:155:296:9567:-846.807,-78.4432,0 1/1:383:13,368:13:222:368:11796:-1041.25,-94.6609,0 1/1:303:13,290:13:159:290:9615:-850.766,-76.7799,0 1/1:386:8,377:8:126:377:12353:-1099.99,-104.586,0 1/1:423:19,403:19:327:403:13138:-1152.5,-97.5501,0 1/1:481:10,468:10:132:468:15067:-1343.57,-132.139,0 dDocent_Contig_2850 18 . C T 942.456 . AB=0.0901771;ABP=908.948;AC=4;AF=0.333334;AN=12;AO=85;CIGAR=1X3M;DP=1080;DPB=1080;DPRA=0;EPP=117.69;EPPR=1912.5;GTI=0;LEN=1;MEANALT=3.33333;MQM=54.3294;MQMR=59.7399;NS=6;NUMALT=2;ODDS=0;PAIRED=0.329412;PAIREDR=0.778142;PAO=0;PQA=0;PQR=0;PRO=0;QA=3307;QR=35922;RO=915;RPL=0;RPP=187.585;RPPR=1989.91;RPR=85;RUN=1;SAF=76;SAP=117.69;SAR=9;SRF=906;SRP=1912.5;SRR=9;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:170:140,11,12:140:5488:11,12:426,455:0,-7.15037,-454.817,-5.05943,-421.038,-452.419 0|0:289:263,6,17:263:10291:6,17:244,614:0,-59.0345,-903.006,-29.137,-854.757,-869.766 0|1:126:107,13,5:107:4206:13,5:502,204:-8.995,0,-341.014,-24.3721,-328.099,-367.813 0|1:231:196,22,7:196:7706:22,7:863,265:-11.969,0,-627.204,-49.6578,-612.51,-681.368 0|1:137:107,0,25:107:4196:0,25:0,1008:-49.3465,-81.5567,-426.397,0,-344.828,-337.302 0|1:127:102,0,19:102:4035:0,19:0,761:-31.157,-61.862,-393.931,0,-332.066,-326.346 dDocent_Contig_2851 18 . G A 690.909 . AB=0.183575;ABP=183.033;AC=5;AF=0.416667;AN=12;AO=38;CIGAR=1X;DP=244;DPB=244;DPRA=1.11892;EPP=85.5263;EPPR=448.162;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.921053;PAIREDR=0.843902;PAO=0;PQA=0;PQR=0;PRO=0;QA=1516;QR=8186;RO=205;RPL=0;RPP=85.5263;RPPR=448.162;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=205;SRP=448.162;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:33,5:33:1324:5:204:-7.30489,0,-107.984 0/1:52:31,20:31:1238:20:807:-57.4785,0,-96.2244 0/1:35:29,6:29:1175:6:219:-9.51752,0,-95.489 0/1:35:32,3:32:1247:3:123:-0.928738,0,-101.96 0/0:37:37,0:37:1472:0:0:0,-11.1381,-132.726 0/1:47:43,4:43:1730:4:163:-0.910018,0,-141.773 dDocent_Contig_2852 11 . G A 1515.35 . AB=0.50303;ABP=3.02346;AC=2;AF=0.166667;AN=12;AO=83;CIGAR=1X;DP=562;DPB=562;DPRA=0.831234;EPP=183.243;EPPR=520.016;GTI=0;LEN=1;MEANALT=2;MQM=49.8434;MQMR=59.3816;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.761006;PAO=0;PQA=0;PQR=0;PRO=0;QA=2263;QR=17748;RO=477;RPL=0;RPP=183.243;RPPR=1038.8;RPR=83;RUN=1;SAF=0;SAP=183.243;SAR=83;SRF=407;SRP=520.016;SRR=70;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:112:112,0:112:4257:0:0:0,-33.7154,-383.139 0/0:106:106,0:106:4044:0:0:0,-31.9092,-363.084 0/0:93:93,0:93:3455:0:0:0,-27.9958,-311.046 0/0:86:86,0:86:3186:0:0:0,-25.8886,-286.698 0/1:88:45,43:45:1564:43:1181:-79.9034,0,-114.256 0/1:77:35,40:35:1242:40:1082:-74.8535,0,-89.3981 dDocent_Contig_2853 7 . G A 5044.68 . AB=0.132625;ABP=3865.69;AC=4;AF=0.333333;AN=12;AO=548;CIGAR=1X;DP=5120;DPB=5120;DPRA=0;EPP=1192.98;EPPR=9592.23;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998868;PAO=0;PQA=0;PQR=0;PRO=0;QA=20450;QR=139862;RO=4416;RPL=0;RPP=1192.98;RPPR=9592.23;RPR=548;RUN=1;SAF=548;SAP=1192.98;SAR=0;SRF=4416;SRP=9592.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:790:643,124:643:19872:124:4661:-188.468,0,-1556.89 0/1:980:797,149:797:25818:149:5588:-217.943,0,-2037.79 0/1:632:531,85:531:16803:85:3193:-101.934,0,-1326.24 0/1:893:784,79:784:24681:79:2924:-3.34191,0,-1960.55 0/0:1003:910,66:910:28676:66:2459:0,-72.4972,-2358.4 0/0:822:751,45:751:24012:45:1625:0,-93.3379,-2013.88 dDocent_Contig_2854 30 . T A 4035.18 . AB=0.139692;ABP=2343.95;AC=3;AF=0.25;AN=12;AO=360;CIGAR=1X;DP=3938;DPB=3938;DPRA=1.40058;EPP=784.74;EPPR=7768.2;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=14233;QR=142357;RO=3576;RPL=0;RPP=784.74;RPPR=7768.2;RPR=360;RUN=1;SAF=360;SAP=784.74;SAR=0;SRF=3576;SRP=7768.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:661:545,116:545:21654:116:4612:-216.029,0,-1748.07 0/0:826:755,70:755:29985:70:2748:0,-1.28473,-2448.53 0/1:725:614,111:614:24532:111:4362:-174.284,0,-1987.48 0/1:690:627,63:627:24877:63:2511:-18.4263,0,-2029.1 0/0:588:588,0:588:23411:0:0:0,-177.006,-2104.98 0/0:448:447,0:447:17898:0:0:0,-134.56,-1608.93 dDocent_Contig_2855 106 . N C 135.579 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=2X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=138;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:1:0,1:0:0:1:19:-1.89661,-0.30103,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:1:0,1:0:0:1:31:-3.04854,-0.30103,0 1|1:3:0,3:0:0:3:88:-8.00802,-0.90309,0 dDocent_Contig_2856 31 . C T 123.952 . AB=0.131313;ABP=119.897;AC=1;AF=0.0833333;AN=12;AO=26;CIGAR=1X;DP=491;DPB=491;DPRA=0.928736;EPP=59.4686;EPPR=1012.74;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.884615;PAIREDR=0.948387;PAO=0;PQA=0;PQR=0;PRO=0;QA=926;QR=18484;RO=465;RPL=0;RPP=59.4686;RPPR=1012.74;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=465;SRP=1012.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:77:70,7:70:2764:7:234:0,-1.79736,-227.5 0/1:99:86,13:86:3415:13:482:-13.9181,0,-277.602 0/0:77:73,4:73:2931:4:144:0,-9.86613,-250.573 0/0:69:68,1:68:2702:1:28:0,-17.9713,-240.496 0/0:82:81,1:81:3189:1:38:0,-20.8872,-283.28 0/0:87:87,0:87:3483:0:0:0,-26.1896,-313.507 dDocent_Contig_2857 21 . C T 170.304 . AB=0.088813;ABP=1722.7;AC=2;AF=0.166667;AN=12;AO=212;CIGAR=1X;DP=4274;DPB=4274;DPRA=0;EPP=463.362;EPPR=8819.19;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8455;QR=162833;RO=4060;RPL=0;RPP=463.362;RPPR=8819.19;RPR=212;RUN=1;SAF=212;SAP=463.362;SAR=0;SRF=4060;SRP=8819.19;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:560:519,40:519:20792:40:1608:0,-23.725,-1724.5 0/0:654:609,45:609:24391:45:1791:0,-35.4723,-2031.6 0/1:491:445,46:445:17823:46:1846:-18.536,0,-1454.75 0/1:680:622,58:622:24921:58:2288:-1.38614,0,-2035.9 0/0:1100:1077,22:1077:43295:22:884:0,-251.344,-3812.44 0/0:789:788,1:788:31611:1:38:0,-233.715,-2838.21 dDocent_Contig_2858 10 . G A 135.779 . AB=0.157143;ABP=74.4828;AC=3;AF=0.25;AN=12;AO=13;CIGAR=1X1M1X;DP=317;DPB=317;DPRA=0.709924;EPP=31.2394;EPPR=660.966;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=510;QR=11513;RO=303;RPL=0;RPP=31.2394;RPPR=660.966;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=303;SRP=660.966;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:116:114,2:114:4316:2:80:0,-27.3279,-380.895 0|1:40:34,6:34:1282:6:236:-9.57145,0,-103.612 0|0:29:29,0:29:1111:0:0:0,-8.72987,-100.275 0|0:102:101,0:101:3848:0:0:0,-30.404,-346.312 0|1:18:16,2:16:609:2:81:-2.26719,0,-49.7221 0|1:12:9,3:9:347:3:113:-6.92366,0,-27.9742 dDocent_Contig_2859 33 . G C 64193.9 . AB=0.827187;ABP=885.422;AC=9;AF=0.75;AN=12;AO=1922;CIGAR=1X;DP=2118;DPB=2118;DPRA=0;EPP=4176.58;EPPR=426.447;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.996878;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=75902;QR=7661;RO=195;RPL=0;RPP=4176.58;RPPR=426.447;RPR=1922;RUN=1;SAF=1922;SAP=4176.58;SAR=0;SRF=195;SRP=426.447;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:313:55,258:55:2172:258:10078:-812.185,0,-101.438 0/1:303:56,246:56:2147:246:9716:-782.533,0,-102.091 1/1:215:12,203:12:484:203:8116:-686.081,-20.8098,0 0/1:333:52,281:52:2071:281:11114:-899.275,0,-86.3303 1/1:512:15,497:15:591:497:19623:-1710.93,-100.601,0 1/1:442:5,437:5:196:437:17255:-1533.6,-115.041,0 dDocent_Contig_2860 107 . N G 124.147 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=55;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=124;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.53536,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:19:-1.89997,-0.30103,0 dDocent_Contig_2861 7 . T G 66593.9 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=2367;CIGAR=1X;DP=2463;DPB=2463;DPRA=0;EPP=5142.89;EPPR=181.071;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.99831;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=75068;QR=1058;RO=82;RPL=0;RPP=5142.89;RPPR=181.071;RPR=2367;RUN=1;SAF=2367;SAP=5142.89;SAR=0;SRF=82;SRP=181.071;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:332:13,317:13:183:317:9913:-875.425,-82.9345,0 1/1:324:9,313:9:137:313:9916:-879.828,-84.6666,0 1/1:155:6,147:6:82:147:4786:-423.291,-38.7327,0 1/1:316:14,300:14:184:300:9614:-848.463,-77.9449,0 1/1:807:17,786:17:203:786:24730:-2206.54,-223.45,0 1/1:529:23,504:23:269:504:16109:-1425.07,-134.555,0 dDocent_Contig_2862 18 . A C 21564.7 . AB=0.0652174;ABP=909.364;AC=0;AF=0;AN=12;AO=36;CIGAR=1M1D6M1X6M1D8M;DP=1240;DPB=1144.79;DPRA=0.571429;EPP=81.1833;EPPR=511.135;GTI=0;LEN=1;MEANALT=10.3333;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1290;QR=8903;RO=234;RPL=0;RPP=81.1833;RPPR=511.135;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=234;SRP=511.135;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:238:82,105,19,0,0,27:82:3116:105,19,0,0,27:3857,654,0,0,1013:-290.589,0,-223.939,-262.178,-202.453,-511.991,-315.274,-255.547,-517.711,-570.807,-315.274,-255.547,-517.711,-570.807,-570.807,-232.31,-172.584,-434.749,-487.845,-487.845,-479.717 0|0:188:50,87,15,0,1,19:50:1916:87,15,0,1,19:3079,559,0,33,723:-235.678,0,-131.074,-204.969,-111.505,-357.708,-250.729,-157.264,-362.223,-407.982,-248.061,-154.596,-359.555,-405.314,-405.013,-191.439,-97.974,-302.935,-348.694,-346.026,-342.974 0|0:126:45,40,2,21,0,14:45:1693:40,2,21,0,14:1394,77,786,0,522:-99.7902,0,-126.672,-107.013,-132.39,-245.123,-48.9675,-74.3493,-181.361,-181.362,-113.337,-138.713,-245.725,-187.684,-252.048,-70.6024,-95.9821,-202.994,-144.952,-209.317,-205.102 0|0:222:52,141,0,4,0,20:52:1980:141,0,4,0,20:5100,0,158,0,761:-400.548,0,-119.96,-416.201,-162.405,-578.605,-403.199,-149.403,-565.603,-564.399,-416.201,-162.405,-578.605,-565.603,-578.605,-353.79,-99.9948,-516.194,-503.193,-516.194,-510.174 0|0:144:0,99,0,0,43,0:0:0:99,0,0,43,0:3449,0,0,1583,0:-409.787,-129.395,-99.5928,-409.787,-129.395,-409.787,-409.787,-129.395,-409.787,-409.787,-280.376,0,-280.376,-280.376,-267.431,-409.787,-129.395,-409.787,-409.787,-280.376,-409.787 0|0:322:5,233,0,0,0,0:5:198:233,0,0,0,0:8307,0,0,0,0:-729.3,-53.84,0,-730.805,-70.14,-747.102,-730.805,-70.14,-747.102,-747.102,-730.805,-70.14,-747.102,-747.102,-747.102,-730.805,-70.14,-747.102,-747.102,-747.102,-747.102 dDocent_Contig_2863 11 . A C 725.103 . AB=0.0547504;ABP=2141.68;AC=1;AF=0.0833333;AN=12;AO=87;CIGAR=3M1X1M;DP=2380;DPB=2352.4;DPRA=1.06005;EPP=191.928;EPPR=4437.16;GTI=0;LEN=1;MEANALT=5.75;MQM=60;MQMR=59.9897;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3435;QR=75045;RO=2042;RPL=0;RPP=191.928;RPPR=4437.16;RPR=87;RUN=1;SAF=87;SAP=191.928;SAR=0;SRF=2042;SRP=4437.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:242:202,27,0,0:202:7454:27,0,0:929,0,0:-14.6011,0,-601.409,-75.4092,-609.536,-684.969,-75.4092,-609.536,-684.969,-684.969 0|0:311:251,32,16,1:251:9128:32,16,1:1095,545,41:-13.3016,0,-735.766,-47.0011,-703.535,-787.577,-85.4749,-742.014,-789.009,-830.571 0|0:408:343,31,1,0:343:12726:31,1,0:1067,39,0:0,-16.6283,-1048.51,-100.047,-1054.63,-1140.97,-103.253,-1057.84,-1141.27,-1144.48 0|0:324:247,36,12,8:247:8983:36,12,8:1223,426,324:-24.8029,0,-722.697,-64.4505,-698.828,-794.384,-72.436,-706.818,-771.28,-803.578 0|1:607:540,0,0,59:540:19903:0,0,59:0,0,2306:-27.0265,-189.583,-1816.91,-189.583,-1816.91,-1816.91,0,-1627.35,-1627.35,-1609.59 0|0:488:459,0,8,19:459:16851:0,8,19:0,257,764:0,-138.173,-1515.44,-117.485,-1494.73,-1492.32,-75.1712,-1452.48,-1431.77,-1446.76 dDocent_Contig_2865 1 . N G 160.556 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=51.2;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=168;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:133:-12.2547,-1.20412,0 dDocent_Contig_2866 7 . A G 106079 . AB=0.252228;ABP=1977.58;AC=6;AF=0.5;AN=12;AO=934;CIGAR=1X2M1X1M;DP=3703;DPB=3705.4;DPRA=0;EPP=2031.17;EPPR=291.816;GTI=0;LEN=1;MEANALT=5.33333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=2.22045e-16;PAIRED=0.998929;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=32384;QR=5097;RO=133;RPL=0;RPP=2031.17;RPPR=291.816;RPR=934;RUN=1;SAF=934;SAP=2031.17;SAR=0;SRF=133;SRP=291.816;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:367:25,58,23,258:25:966:58,23,258:2038,919,10270:-924.533,-766.217,-828.098,-856.366,-769.866,-928.784,-86.4837,0,-90.1309,-88.1655 1|0:492:25,118,1,344:25:963:118,1,344:4158,37,13776:-1386.65,-1055.7,-1099.25,-1391.15,-1131.75,-1469.92,-259.384,0,-335.435,-234.908 1|0:361:34,83,1,241:34:1294:83,1,241:2807,41,9634:-904.468,-687.203,-768.347,-911.319,-789.948,-1017.15,-121.346,0,-224.105,-154.941 1|0:491:17,61,0,410:17:640:61,0,410:2160,0,16424:-1471.23,-1300.44,-1334.51,-1476.35,-1352.87,-1528.79,-123.466,0,-175.908,-52.4859 1|0:1085:13,366,0,680:13:499:366,0,680:12647,0,27230:-3225.72,-2202.23,-2133.01,-3229.63,-2243.19,-3270.59,-986.478,0,-1027.44,-822.74 1|0:907:19,248,0,633:19:735:248,0,633:8574,0,25214:-2706.53,-2015.71,-2001.43,-2712.25,-2076.09,-2772.63,-636.164,0,-696.542,-505.99 dDocent_Contig_2867 7 . T G 74848 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=2654;CIGAR=1X3M;DP=2828;DPB=2828;DPRA=0;EPP=5766.1;EPPR=185.414;GTI=0;LEN=1;MEANALT=4.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=85619;QR=2421;RO=84;RPL=0;RPP=5766.1;RPPR=185.414;RPR=2654;RUN=1;SAF=2654;SAP=5766.1;SAR=0;SRF=84;SRP=185.414;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:412:10,35,363:10:276:35,363:1222,11915:-1046.97,-950.594,-961.884,-87.458,-9.82161,0 1|1:578:18,1,557:18:526:1,557:25,17860:-1559.27,-1562.74,-1604.35,-125.643,-165.726,0 1|1:414:10,31,372:10:269:31,372:1070,11976:-1053.08,-969.177,-981.041,-90.8027,-25.0107,0 1|1:452:13,4,431:13:385:4,431:146,13892:-1214.98,-1206.97,-1236.49,-99.043,-117.803,0 1|1:407:13,0,392:13:381:0,392:0,12453:-1085.94,-1089.85,-1120.22,-87.6461,-118.004,0 1|1:565:20,2,539:20:584:2,539:77,17523:-1523.72,-1523.42,-1569.35,-115.677,-155.924,0 dDocent_Contig_2868 98 . N C 174528 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=5709;CIGAR=2M1X;DP=5792;DPB=7881.67;DPRA=0;EPP=12399.9;EPPR=0;GTI=0;LEN=1;MEANALT=2.33333;MQM=59.9154;MQMR=0;NS=6;NUMALT=1;ODDS=4.44089e-16;PAIRED=0.94027;PAIREDR=0;PAO=2104.5;PQA=70338.5;PQR=70338.5;PRO=2104.5;QA=194306;QR=0;RO=0;RPL=5709;RPP=12399.9;RPPR=0;RPR=0;RUN=1;SAF=5709;SAP=12399.9;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:797:0,772:0:0:772:26174:-2352.86,-232.395,0 1|1:1133:0,1120:0:0:1120:38054:-3419.27,-337.154,0 1|1:702:0,691:0:0:691:23571:-2118,-208.012,0 1|1:974:0,952:0:0:952:32413:-2913.92,-286.581,0 1|1:1037:0,1028:0:0:1028:34927:-3138.44,-309.459,0 1|1:1149:0,1146:0:0:1146:39167:-3509.49,-344.98,0 dDocent_Contig_2870 35 . G A 157.555 . AB=0.4;ABP=4.31318;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=93;DPB=93;DPRA=1.2069;EPP=18.2106;EPPR=189.757;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=275;QR=3343;RO=86;RPL=0;RPP=18.2106;RPPR=189.757;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=86;SRP=189.757;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:6:6,0:6:240:0:0:0,-1.80618,-21.9751 0/0:20:19,1:19:750:1:37:0,-2.32277,-64.1247 0/1:15:9,6:9:355:6:238:-17.2783,0,-27.7956 0/0:12:12,0:12:466:0:0:0,-3.61236,-42.2859 0/0:19:19,0:19:734:0:0:0,-5.71957,-66.377 0/0:21:21,0:21:798:0:0:0,-6.32163,-72.1273 dDocent_Contig_2871 78 . C A 18958.8 . AB=0.601518;ABP=50.1852;AC=8;AF=0.666667;AN=12;AO=688;CIGAR=1X;DP=921;DPB=921;DPRA=0;EPP=1496.98;EPPR=506.792;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=23643;QR=7951;RO=232;RPL=688;RPP=1496.98;RPPR=506.792;RPR=0;RUN=1;SAF=688;SAP=1496.98;SAR=0;SRF=232;SRP=506.792;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:134:50,83:50:1732:83:2803:-212.24,0,-115.889 0/1:191:50,141:50:1724:141:4839:-378.198,0,-97.9517 0/1:65:46,19:46:1586:19:656:-39.7964,0,-123.464 0/1:137:63,74:63:2166:74:2541:-187.707,0,-153.972 1/1:163:6,157:6:168:157:5430:-473.47,-33.6724,0 1/1:231:17,214:17:575:214:7374:-611.691,-17.4669,0 dDocent_Contig_2872 29 . T C 101.686 . AB=0.238095;ABP=15.5221;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=2M1X;DP=330;DPB=329.333;DPRA=1.25532;EPP=24.725;EPPR=693.539;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=399;QR=12506;RO=318;RPL=0;RPP=24.725;RPPR=693.539;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=318;SRP=693.539;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:64:64,0,0:64:2486:0,0:0,0:0,-19.2659,-223.906,-19.2659,-223.906,-223.906 0|0:62:61,0,1:61:2406:0,1:0,40:0,-18.3628,-216.314,-14.6682,-213.019,-212.718 0|0:30:28,2,0:28:1117:2,0:79,0:0,-1.53327,-93.3229,-8.42884,-93.925,-100.426 0|0:47:46,0,1:46:1812:0,1:0,41:0,-13.8474,-162.897,-10.0538,-159.513,-159.212 0|0:106:103,0,3:103:4050:0,3:0,122:0,-31.0061,-364.123,-20.5367,-354.059,-353.156 0|1:21:16,0,5:16:635:0,5:0,196:-11.6914,-16.5079,-68.7858,0,-52.6706,-51.1655 dDocent_Contig_2873 79 . T C 17312 . AB=0.558272;ABP=39.1997;AC=6;AF=0.5;AN=12;AO=685;CIGAR=1X;DP=1227;DPB=1227;DPRA=0;EPP=1490.47;EPPR=1179.95;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=23450;QR=19102;RO=542;RPL=685;RPP=1490.47;RPPR=1179.95;RPR=0;RUN=1;SAF=685;SAP=1490.47;SAR=0;SRF=542;SRP=1179.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:180:40,140:40:1411:140:4794:-377.458,0,-73.1015 0/1:244:41,203:41:1433:203:6926:-550.004,0,-55.8138 0/1:221:105,116:105:3663:116:4010:-294.583,0,-263.351 0/1:249:95,154:95:3363:154:5244:-397.177,0,-227.933 0/1:135:107,28:107:3784:28:963:-46.3431,0,-300.123 0/1:198:154,44:154:5448:44:1513:-76.8591,0,-430.852 dDocent_Contig_2874 12 . G C 1291.1 . AB=0.118289;ABP=1511.56;AC=2;AF=0.166667;AN=12;AO=186;CIGAR=1X;DP=2970;DPB=2970;DPRA=1.16552;EPP=406.904;EPPR=6044.05;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999281;PAO=0;PQA=0;PQR=0;PRO=0;QA=7178;QR=108359;RO=2782;RPL=0;RPP=406.904;RPPR=6044.05;RPR=186;RUN=1;SAF=186;SAP=406.904;SAR=0;SRF=2782;SRP=6044.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:379:377,2:377:14525:2:78:0,-106.687,-1298.9 0/1:656:585,71:585:22810:71:2734:-48.7276,0,-1853.69 0/0:515:481,34:481:18726:34:1295:0,-38.2079,-1567.14 0/1:536:465,70:465:18132:70:2721:-83.6044,0,-1469.15 0/0:435:434,0:434:16962:0:0:0,-130.647,-1525.09 0/0:449:440,9:440:17204:9:350:0,-103.305,-1515.25 dDocent_Contig_2876 74 . G A 406.31 . AB=0.215686;ABP=74.6263;AC=1;AF=0.0833333;AN=12;AO=22;CIGAR=1X;DP=1046;DPB=1046;DPRA=0.540254;EPP=50.7827;EPPR=2224.43;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.29521;PAO=0;PQA=0;PQR=0;PRO=0;QA=806;QR=37430;RO=1023;RPL=22;RPP=50.7827;RPPR=724.476;RPR=0;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=803;SRP=724.476;SRR=220;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:248:248,0:248:9099:0:0:0,-74.6554,-818.733 0/0:160:160,0:160:5822:0:0:0,-48.1648,-524.019 0/0:152:152,0:152:5610:0:0:0,-45.7566,-504.924 0/0:209:208,0:208:7620:0:0:0,-62.6142,-685.312 0/1:102:80,22:80:2886:22:806:-42.1539,0,-229.242 0/0:175:175,0:175:6393:0:0:0,-52.6802,-575.364 dDocent_Contig_2877 98 . N C 92.0128 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=92;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:60:-5.69918,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 dDocent_Contig_2878 32 . T C 7297.3 . AB=0.348214;ABP=159.899;AC=6;AF=0.5;AN=12;AO=273;CIGAR=1X1M;DP=784;DPB=784;DPRA=0;EPP=595.822;EPPR=1099.6;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.992674;PAIREDR=0.99604;PAO=0;PQA=0;PQR=0;PRO=0;QA=10828;QR=20040;RO=505;RPL=0;RPP=595.822;RPPR=1099.6;RPR=273;RUN=1;SAF=273;SAP=595.822;SAR=0;SRF=505;SRP=1099.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:114:80,0,34:80:3210:0,34:0,1354:-87.8039,-111.886,-376.377,0,-264.889,-254.654 0|1:169:124,1,44:124:4923:1,44:29,1765:-108.206,-143.227,-548.186,0,-403.061,-392.123 0|1:73:47,5,21:47:1837:5,21:203,843:-55.3087,-52.7138,-202.212,0,-134.253,-144.675 0|1:131:81,0,50:81:3222:0,50:0,1972:-138.254,-162.638,-427.916,0,-265.674,-250.622 0|1:147:82,0,65:82:3225:0,65:0,2563:-186.573,-211.258,-476.514,0,-265.65,-246.083 0|1:150:91,0,59:91:3623:0,59:0,2331:-164.806,-192.2,-490.516,0,-298.712,-280.952 dDocent_Contig_2880 29 . A T 298.574 . AB=0.190476;ABP=72.911;AC=2;AF=0.166667;AN=12;AO=18;CIGAR=1X;DP=264;DPB=264;DPRA=1.0625;EPP=42.0968;EPPR=537.193;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.944444;PAIREDR=0.934959;PAO=0;PQA=0;PQR=0;PRO=0;QA=722;QR=9736;RO=246;RPL=0;RPP=42.0968;RPPR=537.193;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=246;SRP=537.193;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:57:57,0:57:2262:0:0:0,-17.1587,-203.753 0/0:52:50,2:50:1970:2:82:0,-7.87388,-169.713 0/0:53:53,0:53:2095:0:0:0,-15.9546,-188.734 0/1:54:49,5:49:1961:5:203:-2.39744,0,-160.43 0/0:18:18,0:18:717:0:0:0,-5.41854,-64.8533 0/1:30:19,11:19:731:11:437:-30.6537,0,-57.0699 dDocent_Contig_2881 60 . G A 1061.65 . AB=0.134036;ABP=775.44;AC=2;AF=0.166667;AN=12;AO=125;CIGAR=1X;DP=2173;DPB=2173;DPRA=0.776629;EPP=274.444;EPPR=4445.84;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4772;QR=78068;RO=2046;RPL=125;RPP=274.444;RPPR=4445.84;RPR=0;RUN=1;SAF=125;SAP=274.444;SAR=0;SRF=2046;SRP=4445.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:297:241,56:241:9133:56:2166:-105.723,0,-732.172 0/0:381:351,30:351:13253:30:1117:0,-13.8921,-1091.22 0/0:331:326,5:326:12590:5:190:0,-82.1784,-1114.85 0/1:367:332,33:332:12741:33:1261:-3.66167,0,-1035.86 0/0:445:445,0:445:17086:0:0:0,-133.958,-1536.58 0/0:352:351,1:351:13265:1:38:0,-102.165,-1189.29 dDocent_Contig_2882 63 . T G 87.6306 . AB=0.153846;ABP=57.1301;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=195;DPB=195;DPRA=0.911765;EPP=24.725;EPPR=404.733;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.891892;PAO=0;PQA=0;PQR=0;PRO=0;QA=378;QR=7023;RO=185;RPL=10;RPP=24.725;RPPR=404.733;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=185;SRP=404.733;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:34,0:34:1293:0:0:0,-10.235,-116.657 0/0:41:39,2:39:1434:2:79:0,-4.8446,-121.842 0/1:19:16,3:16:639:3:119:-5.37582,0,-52.1273 0/1:33:28,5:28:1081:5:180:-6.60906,0,-87.6526 0/0:27:27,0:27:1040:0:0:0,-8.12781,-93.8958 0/0:41:41,0:41:1536:0:0:0,-12.3422,-138.487 dDocent_Contig_2883 34 . G T 302.148 . AB=0.458333;ABP=3.37221;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=176;DPB=176;DPRA=1.95506;EPP=29.068;EPPR=359.132;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=470;QR=6400;RO=164;RPL=0;RPP=29.068;RPPR=359.132;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=164;SRP=359.132;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:821:0:0:0,-6.32163,-74.2044 0/0:20:20,0:20:763:0:0:0,-6.0206,-68.9872 0/0:63:62,1:62:2416:1:41:0,-14.8703,-213.503 0/1:24:13,11:13:521:11:429:-31.7377,0,-40.0111 0/0:31:31,0:31:1219:0:0:0,-9.33193,-109.984 0/0:17:17,0:17:660:0:0:0,-5.11751,-59.7246 dDocent_Contig_2884 9 . A T 4699.97 . AB=0.0526316;ABP=69.0688;AC=0;AF=0;AN=12;AO=2;CIGAR=2X1M1X;DP=427;DPB=427;DPRA=0;EPP=7.35324;EPPR=550.221;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=58.9524;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=0;PAIREDR=0.015873;PAO=0;PQA=0;PQR=0;PRO=0;QA=71;QR=9333;RO=252;RPL=0;RPP=7.35324;RPPR=550.221;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=252;SRP=550.221;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:85:52,0,32:52:1851:0,32:0,1243:-85.6046,-101.258,-251.453,0,-150.189,-140.556 0|0:105:72,0,33:72:2690:0,33:0,1293:-85.0314,-106.706,-326.934,0,-220.614,-210.68 0|0:48:20,0,28:20:758:0,28:0,1083:-83.3021,-89.3227,-151.393,0,-62.4521,-54.0233 0|0:106:63,0,43:63:2364:0,43:0,1702:-121.311,-140.276,-333.662,0,-193.773,-180.828 0|0:45:23,0,22:23:852:0,22:0,884:-66.3236,-73.2473,-141.564,0,-68.6999,-62.0772 0|0:38:22,2,14:22:818:2,14:71,561:-39.6463,-40.7092,-106.7,0,-61.0715,-62.4217 dDocent_Contig_2885 31 . A G 18743.4 . AB=0.284366;ABP=1072.48;AC=6;AF=0.5;AN=12;AO=753;CIGAR=1X;DP=2648;DPB=2648;DPRA=0;EPP=1638.13;EPPR=4115.78;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999472;PAO=0;PQA=0;PQR=0;PRO=0;QA=29816;QR=75346;RO=1894;RPL=0;RPP=1638.13;RPPR=4115.78;RPR=753;RUN=1;SAF=753;SAP=1638.13;SAR=0;SRF=1894;SRP=4115.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:425:351,73:351:13889:73:2895:-132.613,0,-1120.96 0/1:671:458,213:458:18246:213:8461:-559.032,0,-1438.67 0/1:516:360,156:360:14350:156:6216:-403.86,0,-1135.09 0/1:536:422,114:422:16775:114:4484:-242.153,0,-1347.08 0/1:238:135,103:135:5398:103:4052:-293.041,0,-414.02 0/1:262:168,94:168:6688:94:3708:-254.86,0,-522.746 dDocent_Contig_2886 106 . N G 1679.67 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=55;CIGAR=2X;DP=55;DPB=55;DPRA=0;EPP=122.441;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1856;QR=0;RO=0;RPL=0;RPP=122.441;RPPR=0;RPR=55;RUN=1;SAF=0;SAP=122.441;SAR=55;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:5:0,5:0:0:5:173:-15.9102,-1.50515,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:50:0,50:0:0:50:1683:-151.756,-15.0515,0 dDocent_Contig_2887 26 . T C 2490.6 . AB=0.173028;ABP=732.901;AC=5;AF=0.416667;AN=12;AO=136;CIGAR=1X;DP=857;DPB=857;DPRA=2.21408;EPP=298.331;EPPR=1568.64;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.977941;PAIREDR=0.979196;PAO=0;PQA=0;PQR=0;PRO=0;QA=5483;QR=28697;RO=721;RPL=0;RPP=298.331;RPPR=1568.64;RPR=136;RUN=1;SAF=136;SAP=298.331;SAR=0;SRF=721;SRP=1568.64;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:145:107,38:107:4255:38:1539:-95.0929,0,-339.26 0/1:220:180,40:180:7187:40:1600:-78.0081,0,-580.261 0/1:105:84,21:84:3339:21:854:-45.5619,0,-268.95 0/1:184:163,21:163:6504:21:842:-20.7018,0,-529.699 0/0:71:71,0:71:2838:0:0:0,-21.3731,-255.525 0/1:132:116,16:116:4574:16:648:-18.9172,0,-371.865 dDocent_Contig_2888 7 . T G 66621.2 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=2388;CIGAR=1X;DP=2477;DPB=2477;DPRA=0;EPP=5188.49;EPPR=181.071;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=75168;QR=1128;RO=82;RPL=0;RPP=5188.49;RPPR=181.071;RPR=2388;RUN=1;SAF=2388;SAP=5188.49;SAR=0;SRF=82;SRP=181.071;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:583:20,561:20:266:561:17549:-1554.87,-150.938,0 1/1:498:14,484:14:200:484:15278:-1356.51,-131.77,0 1/1:344:14,329:14:184:329:10367:-916.179,-86.6735,0 1/1:497:20,475:20:261:475:14718:-1300.67,-125.502,0 1/1:230:6,224:6:107:224:7254:-643.029,-59.4291,0 1/1:325:8,315:8:110:315:10002:-890.006,-87.3429,0 dDocent_Contig_2889 11 . C T 658.887 . AB=0.174528;ABP=198.074;AC=3;AF=0.25;AN=12;AO=41;CIGAR=1X4M;DP=695;DPB=695;DPRA=1.92727;EPP=92.0407;EPPR=1336.29;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.998371;PAO=0;PQA=0;PQR=0;PRO=0;QA=1432;QR=23723;RO=614;RPL=0;RPP=92.0407;RPPR=1336.29;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=614;SRP=1336.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:67:67,0,0:67:2584:0,0:0,0:0,-20.169,-232.737,-20.169,-232.737,-232.737 0|1:153:137,16,0:137:5340:16,0:607,0:-8.90892,0,-434.472,-50.15,-439.289,-489.059 0|1:59:52,7,0:52:1971:7,0:270,0:-6.90357,0,-159.858,-22.5571,-161.965,-184.138 0|0:98:98,0,0:98:3804:0,0:0,0:0,-29.5009,-342.432,-29.5009,-342.432,-342.432 0|1:212:162,11,37:162:6244:11,37:427,1281:-55.2981,-68.9705,-578.37,0,-477.607,-501.553 0|0:106:98,4,4:98:3780:4,4:157,151:0,-16.5808,-325.77,-17.1324,-314.599,-326.308 dDocent_Contig_2890 23 . G T 101.334 . AB=0.100719;ABP=387.97;AC=1;AF=0.0833333;AN=12;AO=28;CIGAR=1X;DP=1851;DPB=1851;DPRA=0.883662;EPP=63.8115;EPPR=3961.6;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.938563;PAO=0;PQA=0;PQR=0;PRO=0;QA=1056;QR=72083;RO=1823;RPL=0;RPP=63.8115;RPPR=3961.6;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=1823;SRP=3961.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:350:350,0:350:13854:0:0:0,-105.36,-1245.85 0/0:412:412,0:412:16254:0:0:0,-124.024,-1461.63 0/0:257:257,0:257:10222:0:0:0,-77.3647,-919.328 0/0:339:339,0:339:13338:0:0:0,-102.049,-1199.47 0/1:278:250,28:250:9897:28:1056:-11.6563,0,-806.443 0/0:215:215,0:215:8518:0:0:0,-64.7214,-766.158 dDocent_Contig_2891 17 . A G 5950.54 . AB=0.288528;ABP=338.23;AC=5;AF=0.416667;AN=12;AO=257;CIGAR=1X;DP=959;DPB=959;DPRA=0;EPP=561.079;EPPR=1527.38;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.995726;PAO=0;PQA=0;PQR=0;PRO=0;QA=9889;QR=27852;RO=702;RPL=0;RPP=561.079;RPPR=1527.38;RPR=257;RUN=1;SAF=257;SAP=561.079;SAR=0;SRF=702;SRP=1527.38;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:154:110,44:110:4347:44:1711:-107.862,0,-344.822 0/1:238:180,58:180:7108:58:2234:-129.599,0,-567.758 0/0:96:88,8:88:3457:8:300:0,-1.55047,-283.83 0/1:162:131,31:131:5259:31:1162:-56.0854,0,-424.393 0/1:145:85,60:85:3412:60:2298:-163.348,0,-263.474 0/1:164:108,56:108:4269:56:2184:-147.381,0,-334.798 dDocent_Contig_2892 180 . C T 57.8201 . AB=0.131579;ABP=47.8112;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=158;DPB=158;DPRA=1.58333;EPP=13.8677;EPPR=335.246;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=204;QR=6084;RO=153;RPL=5;RPP=13.8677;RPPR=335.246;RPR=0;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=335.246;SRR=153;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:42:42,0:42:1665:0:0:0,-12.6433,-150.074 0/0:33:33,0:33:1328:0:0:0,-9.93399,-119.78 0/0:18:18,0:18:718:0:0:0,-5.41854,-64.9461 0/0:13:13,0:13:524:0:0:0,-3.91339,-47.5055 0/1:38:33,5:33:1303:5:204:-7.30489,0,-106.089 0/0:14:14,0:14:546:0:0:0,-4.21442,-49.4778 dDocent_Contig_2894 90 . C A 48772.8 . AB=0.0592264;ABP=4191.4;AC=0;AF=0;AN=12;AO=147;CIGAR=1X2M1X1M1X;DP=2975;DPB=2975;DPRA=0;EPP=322.217;EPPR=2033.34;GTI=0;LEN=1;MEANALT=4.8;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.993197;PAIREDR=0.997861;PAO=0;PQA=0;PQR=0;PRO=0;QA=4961;QR=31274;RO=935;RPL=147;RPP=322.217;RPPR=2033.34;RPR=0;RUN=1;SAF=147;SAP=322.217;SAR=0;SRF=935;SRP=2033.34;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:396:158,28,206:158:5239:28,206:946,7013:-521.399,-492.277,-907.648,0,-347.132,-361.805 0|0:588:217,63,302:217:7257:63,302:2135,10243:-765.316,-657.517,-1226.15,0,-414.484,-496.696 0|0:444:179,10,253:179:6017:10,253:343,8589:-642.708,-668.743,-1153.2,0,-459.636,-411.325 0|0:489:176,32,281:176:5915:32,281:1073,9566:-723.07,-689.146,-1158.71,0,-392.295,-394.611 0|0:493:106,0,383:106:3534:0,383:0,12923:-1015.58,-1047.48,-1333.54,0,-286.162,-170.868 0|0:565:99,14,450:99:3312:14,450:464,15402:-1220.43,-1212.7,-1476.67,0,-230.657,-132.726 dDocent_Contig_2895 38 . C T 36894.5 . AB=0.519698;ABP=11.4793;AC=6;AF=0.5;AN=12;AO=1306;CIGAR=1X;DP=2513;DPB=2513;DPRA=0;EPP=2838.95;EPPR=2615.29;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=49536;QR=46872;RO=1203;RPL=0;RPP=2838.95;RPPR=2615.29;RPR=1306;RUN=1;SAF=1306;SAP=2838.95;SAR=0;SRF=1203;SRP=2615.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:295:122,173:122:4765:173:6595:-504.598,0,-340.014 0/1:489:335,154:335:12994:154:5778:-372.75,0,-1021.49 0/1:402:258,144:258:10186:144:5542:-377.656,0,-795.121 0/1:414:252,161:252:9752:161:6095:-423.892,0,-752.651 0/1:498:100,397:100:3873:397:14950:-1194.99,0,-198.908 0/1:415:136,277:136:5302:277:10576:-826.781,0,-352.529 dDocent_Contig_2896 7 . G A 399.177 . AB=0.109562;ABP=667.706;AC=2;AF=0.166667;AN=12;AO=138;CIGAR=1X;DP=2014;DPB=2014;DPRA=0;EPP=302.673;EPPR=3916;GTI=0;LEN=1;MEANALT=2.33333;MQM=54.8261;MQMR=58.9267;NS=6;NUMALT=1;ODDS=0;PAIRED=0.224638;PAIREDR=0.261376;PAO=0;PQA=0;PQR=0;PRO=0;QA=5058;QR=57205;RO=1802;RPL=0;RPP=302.673;RPPR=3916;RPR=138;RUN=1;SAF=138;SAP=302.673;SAR=0;SRF=1802;SRP=3916;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:357:338,10:338:10950:10:333:0,-75.3252,-955.314 0/0:494:442,30:442:13878:30:1042:0,-49.197,-1154.07 0/0:268:236,23:236:7484:23:864:0,-1.7011,-596.647 0/0:393:358,20:358:11438:20:707:0,-50.246,-964.756 0/1:233:198,26:198:6302:26:1002:-22.1376,0,-499.357 0/1:269:230,29:230:7153:29:1110:-21.002,0,-564.963 dDocent_Contig_2897 27 . G A 4449.68 . AB=0.271111;ABP=310.172;AC=2;AF=0.166667;AN=12;AO=209;CIGAR=1X;DP=1784;DPB=1784;DPRA=0.855621;EPP=456.848;EPPR=3420.91;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998729;PAO=0;PQA=0;PQR=0;PRO=0;QA=8267;QR=62397;RO=1574;RPL=0;RPP=456.848;RPPR=3420.91;RPR=209;RUN=1;SAF=209;SAP=456.848;SAR=0;SRF=1574;SRP=3420.91;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:236:229,7:229:9063:7:286:0,-44.9283,-789.042 0/1:334:242,92:242:9576:92:3632:-226.362,0,-760.733 0/0:182:171,11:171:6781:11:438:0,-15.014,-570.231 0/1:341:250,91:250:9973:91:3605:-221.829,0,-794.299 0/0:338:337,0:337:13333:0:0:0,-101.447,-1198.62 0/0:353:345,8:345:13671:8:306:0,-78.3719,-1201.52 dDocent_Contig_2898 15 . C T 60.005 . AB=0.125;ABP=22.5536;AC=3;AF=0.25;AN=12;AO=2;CIGAR=1X1M1X4M;DP=125;DPB=125;DPRA=0.774194;EPP=7.35324;EPPR=248.387;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.840708;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=4414;RO=113;RPL=0;RPP=7.35324;RPPR=248.387;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=113;SRP=248.387;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:18:16,2,0:16:632:2,0:78,0:-1.98424,0,-51.7992,-6.80072,-52.4013,-58.8118 0|0:23:22,0,0:22:858:0,0:0,0:0,-6.62266,-77.1381,-6.62266,-77.1381,-77.1381 0|0:21:21,0,0:21:794:0,0:0,0:0,-6.32163,-71.7663,-6.32163,-71.7663,-71.7663 0|1:29:25,4,0:25:995:4,0:159,0:-5.96246,0,-81.122,-13.4882,-82.3261,-95.4171 0|1:16:12,2,2:12:467:2,2:78,82:-3.16572,-0.376901,-38.1314,0,-31.9623,-37.7715 0|0:18:17,1,0:17:668:1,0:37,0:0,-1.72071,-56.7562,-5.11751,-57.0572,-60.083 dDocent_Contig_2899 79 . T C 9354.16 . AB=0.522963;ABP=6.10183;AC=2;AF=0.166667;AN=12;AO=353;CIGAR=1X;DP=1016;DPB=1016;DPRA=3.95894;EPP=769.54;EPPR=1442.7;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.994334;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=12686;QR=23916;RO=663;RPL=353;RPP=769.54;RPPR=1442.7;RPR=0;RUN=1;SAF=353;SAP=769.54;SAR=0;SRF=663;SRP=1442.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1488:0:0:0,-12.3422,-134.211 0/0:72:72,0:72:2607:0:0:0,-21.6742,-234.866 0/0:90:90,0:90:3238:0:0:0,-27.0927,-291.622 0/0:138:138,0:138:4969:0:0:0,-41.5421,-447.337 0/1:269:152,117:152:5543:117:4235:-300.326,0,-417.982 0/1:406:170,236:170:6071:236:8451:-638.312,0,-424.238 dDocent_Contig_2900 109 . C T 1352.72 . AB=0.118227;ABP=1544.97;AC=3;AF=0.25;AN=12;AO=203;CIGAR=1X;DP=2142;DPB=2142;DPRA=0;EPP=294.234;EPPR=2174.11;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=58.1584;NS=6;NUMALT=1;ODDS=0;PAIRED=0.344828;PAIREDR=0.315789;PAO=0;PQA=0;PQR=0;PRO=0;QA=7948;QR=74984;RO=1938;RPL=203;RPP=443.819;RPPR=4211.32;RPR=0;RUN=1;SAF=19;SAP=294.234;SAR=184;SRF=273;SRP=2174.11;SRR=1665;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:299:283,16:283:10879:16:625:0,-33.4291,-919.599 0/0:398:373,24:373:14374:24:948:0,-34.3004,-1200.03 0/0:227:208,19:208:8090:19:747:0,-0.782473,-656.93 0/1:419:375,44:375:14549:44:1699:-27.0019,0,-1173.68 0/1:296:260,36:260:10183:36:1445:-41.1961,0,-818.546 0/1:503:439,64:439:16909:64:2484:-72.2959,0,-1363.24 dDocent_Contig_2901 17 . T A 332.17 . AB=0.227273;ABP=45.6501;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=289;DPB=289;DPRA=1.47982;EPP=35.5824;EPPR=597.994;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.908759;PAO=0;PQA=0;PQR=0;PRO=0;QA=603;QR=10876;RO=274;RPL=0;RPP=35.5824;RPPR=597.994;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=274;SRP=597.994;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1630:0:0:0,-12.3422,-146.924 0/0:36:36,0:36:1435:0:0:0,-10.8371,-129.393 0/0:44:44,0:44:1778:0:0:0,-13.2453,-160.222 0/0:48:48,0:48:1846:0:0:0,-14.4494,-166.342 0/1:66:51,15:51:2042:15:603:-34.7399,0,-164.091 0/0:54:54,0:54:2145:0:0:0,-16.2556,-193.22 dDocent_Contig_2902 31 . G A 125.527 . AB=0.153846;ABP=57.1301;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=3M1X1M;DP=303;DPB=299.4;DPRA=1.03483;EPP=20.3821;EPPR=617.537;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.893993;PAO=0;PQA=0;PQR=0;PRO=0;QA=312;QR=11094;RO=283;RPL=0;RPP=20.3821;RPPR=617.537;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=283;SRP=617.537;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:30:29,0,0:29:1128:0,0:0,0:0,-8.72987,-101.433,-8.72987,-101.433,-101.433 0|0:34:34,0,0:34:1326:0,0:0,0:0,-10.235,-119.615,-10.235,-119.615,-119.615 0|0:54:53,1,0:53:2094:1,0:40,0:0,-12.2599,-184.66,-15.9546,-184.961,-188.256 0|0:50:44,5,0:44:1728:5,0:197,0:-2.9818,0,-140.63,-16.2271,-142.135,-158.342 0|0:83:79,0,0:79:3078:0,0:0,0:0,-23.7814,-276.736,-23.7814,-276.736,-276.736 0|1:52:44,0,8:44:1740:0,8:0,312:-12.7853,-26.0306,-169.227,0,-143.587,-141.179 dDocent_Contig_2903 37 . T A 604.846 . AB=0.153846;ABP=287.139;AC=2;AF=0.166667;AN=12;AO=74;CIGAR=1X;DP=990;DPB=990;DPRA=0;EPP=163.699;EPPR=1992.08;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2864;QR=36455;RO=916;RPL=0;RPP=163.699;RPPR=1992.08;RPR=74;RUN=1;SAF=74;SAP=163.699;SAR=0;SRF=916;SRP=1992.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:115:106,9:106:4191:9:361:0,-1.76486,-344.304 0/1:180:150,30:150:6019:30:1130:-47.7917,0,-487.29 0/1:93:81,12:81:3232:12:484:-15.9147,0,-262.954 0/0:173:162,11:162:6418:11:433:0,-12.7548,-538.054 0/0:210:203,7:203:8081:7:277:0,-37.9169,-701.567 0/0:219:214,5:214:8514:5:179:0,-49.4681,-749.33 dDocent_Contig_2904 1 . N G 75.9266 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=80;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:80:-7.59157,-0.60206,0 dDocent_Contig_2905 107 . N G 60.7946 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=64;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:64:-6.07837,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_2907 122 . C G 645.409 . AB=0.191489;ABP=197.288;AC=2;AF=0.166667;AN=12;AO=48;CIGAR=1X;DP=722;DPB=722;DPRA=1.09884;EPP=107.241;EPPR=1462.24;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1637;QR=22748;RO=672;RPL=0;RPP=107.241;RPPR=1462.24;RPR=48;RUN=1;SAF=0;SAP=107.241;SAR=48;SRF=0;SRP=1462.24;SRR=672;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:67:66,0:66:2249:0:0:0,-19.868,-202.603 0/1:134:102,32:102:3475:32:1100:-58.9694,0,-272.641 0/1:101:88,13:88:3015:13:432:-8.79334,0,-241.191 0/0:143:139,3:139:4644:3:105:0,-33.1726,-408.392 0/0:118:118,0:118:3965:0:0:0,-35.5215,-357.062 0/0:159:159,0:159:5400:0:0:0,-47.8638,-486.167 dDocent_Contig_2908 7 . A G 33063.2 . AB=0.45249;ABP=67.1799;AC=6;AF=0.5;AN=12;AO=1481;CIGAR=1X;DP=3273;DPB=3273;DPRA=0;EPP=3218.96;EPPR=3768.34;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=59.9977;NS=6;NUMALT=1;ODDS=0;PAIRED=0.991222;PAIREDR=0.99654;PAO=0;PQA=0;PQR=0;PRO=0;QA=47629;QR=65935;RO=1734;RPL=0;RPP=3218.96;RPPR=3768.34;RPR=1481;RUN=1;SAF=1481;SAP=3218.96;SAR=0;SRF=1734;SRP=3768.34;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:471:201,261:201:7633:261:8403:-616.969,0,-547.561 0/1:521:211,302:211:8046:302:9684:-716.846,0,-569.352 0/1:395:164,220:164:6252:220:7186:-530.93,0,-446.812 0/1:585:220,356:220:8389:356:11262:-839.849,0,-581.243 0/1:679:533,137:533:20270:137:4496:-202.916,0,-1621.43 0/1:622:405,205:405:15345:205:6598:-410.03,0,-1196.55 dDocent_Contig_2909 18 . G A 36.9312 . AB=0.117647;ABP=46.1843;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=827;DPB=827;DPRA=0.310056;EPP=10.7656;EPPR=1755.48;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.714286;PAIREDR=0.986569;PAO=0;PQA=0;PQR=0;PRO=0;QA=270;QR=32102;RO=819;RPL=0;RPP=18.2106;RPPR=1781.45;RPR=7;RUN=1;SAF=6;SAP=10.7656;SAR=1;SRF=816;SRP=1755.48;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:30,4:30:1169:4:164:-4.91488,0,-95.2527 0/0:77:74,3:74:2888:3:106:0,-13.2926,-250.154 0/0:38:38,0:38:1515:0:0:0,-11.4391,-136.593 0/0:31:31,0:31:1232:0:0:0,-9.33193,-111.157 0/0:340:340,0:340:13408:0:0:0,-102.35,-1205.79 0/0:307:306,0:306:11890:0:0:0,-92.1152,-1069.01 dDocent_Contig_2910 32 . G C 15514.8 . AB=0.589372;ABP=60.4547;AC=6;AF=0.5;AN=12;AO=488;CIGAR=2X;DP=828;DPB=828;DPRA=0;EPP=1062.69;EPPR=485.077;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.995902;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=19465;QR=8786;RO=222;RPL=0;RPP=1062.69;RPPR=485.077;RPR=488;RUN=1;SAF=488;SAP=1062.69;SAR=0;SRF=222;SRP=485.077;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:114:24,66,24:24:957:66,24:2631,898:-209.453,0,-58.9542,-143.158,-5.30838,-214.743 1|0:114:34,37,43:34:1344:37,43:1478,1669:-138.029,-26.5308,-125.989,-11.139,0,-108.786 0|1:176:64,84,28:64:2535:84,28:3392,1088:-260.372,0,-183.357,-190.242,-119.246,-390.448 0|1:117:53,50,14:53:2096:50,14:1968,543:-145.922,0,-157.439,-117.269,-127.884,-285.541 0|1:161:27,129,5:27:1070:129,5:5123,195:-413.609,0,-49.2369,-405.708,-72.0417,-492.267 0|1:146:20,122,4:20:784:122,4:4873,161:-395.318,0,-27.7313,-388.069,-51.1861,-451.33 dDocent_Contig_2911 37 . G T 461.839 . AB=0.296875;ABP=25.9465;AC=2;AF=0.166667;AN=12;AO=19;CIGAR=1X;DP=204;DPB=204;DPRA=0.914286;EPP=44.2683;EPPR=404.733;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.940541;PAO=0;PQA=0;PQR=0;PRO=0;QA=755;QR=7308;RO=185;RPL=0;RPP=44.2683;RPPR=404.733;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=185;SRP=404.733;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:830:0:0:0,-6.32163,-75.0126 0/0:35:35,0:35:1381:0:0:0,-10.536,-124.551 0/0:41:41,0:41:1596:0:0:0,-12.3422,-143.892 0/0:43:43,0:43:1713:0:0:0,-12.9443,-154.397 0/1:37:27,10:27:1070:10:389:-24.2284,0,-85.4538 0/1:27:18,9:18:718:9:366:-25.1773,0,-56.8195 dDocent_Contig_2912 68 . A G 208.186 . AB=0.196721;ABP=51.7438;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=148;DPB=148;DPRA=1.4023;EPP=29.068;EPPR=298.331;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.333333;PAIREDR=0.830882;PAO=0;PQA=0;PQR=0;PRO=0;QA=463;QR=5182;RO=136;RPL=7;RPP=3.73412;RPPR=3.07417;RPR=5;RUN=1;SAF=7;SAP=3.73412;SAR=5;SRF=69;SRP=3.07417;SRR=67;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:715:0:0:0,-5.71957,-64.6739 0/0:22:22,0:22:826:0:0:0,-6.62266,-74.6541 0/0:21:21,0:21:811:0:0:0,-6.32163,-73.3094 0/0:25:25,0:25:946:0:0:0,-7.52575,-85.4458 0/1:30:26,4:26:1003:4:154:-5.20209,0,-81.5401 0/1:31:23,8:23:881:8:309:-18.8383,0,-70.2734 dDocent_Contig_2913 96 . T C 54800.5 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=1884;CIGAR=1X;DP=1988;DPB=1988;DPRA=0;EPP=4094.06;EPPR=228.843;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998938;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=64484;QR=3585;RO=104;RPL=1884;RPP=4094.06;RPPR=228.843;RPR=0;RUN=1;SAF=1884;SAP=4094.06;SAR=0;SRF=104;SRP=228.843;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:266:17,249:17:584:249:8621:-723.066,-27.1892,0 1/1:372:0,372:0:0:372:12742:-1146.71,-111.983,0 1/1:392:31,361:31:1075:361:12390:-1017.98,-20.9431,0 1/1:314:13,301:13:437:301:10212:-879.444,-54.8717,0 1/1:298:22,276:22:762:276:9437:-780.468,-20.8059,0 1/1:346:21,325:21:727:325:11082:-931.612,-38.4044,0 dDocent_Contig_2914 115 . G A 5401.52 . AB=0.448944;ABP=15.8709;AC=6;AF=0.5;AN=12;AO=255;CIGAR=1X3M1X;DP=568;DPB=568;DPRA=0;EPP=556.736;EPPR=673.995;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.992157;PAIREDR=0.993528;PAO=0;PQA=0;PQR=0;PRO=0;QA=8000;QR=10068;RO=309;RPL=0;RPP=556.736;RPPR=673.995;RPR=255;RUN=1;SAF=0;SAP=556.736;SAR=255;SRF=0;SRP=673.995;SRR=309;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:114:84,29:84:2754:29:912:-48.2816,0,-214.023 0|1:110:60,50:60:1989:50:1563:-107.836,0,-146.175 0|1:44:25,18:25:764:18:570:-38.5212,0,-55.9658 0|1:80:20,60:20:615:60:1903:-147.463,0,-31.5606 0|1:146:94,50:94:3087:50:1577:-98.5213,0,-234.385 0|1:74:26,48:26:859:48:1475:-110.751,0,-55.3393 dDocent_Contig_2915 8 . A G 1477.27 . AB=0.150881;ABP=964.284;AC=1;AF=0.0833333;AN=12;AO=138;CIGAR=1X;DP=3680;DPB=3680;DPRA=1.25376;EPP=302.673;EPPR=7692.19;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99887;PAO=0;PQA=0;PQR=0;PRO=0;QA=4716;QR=116815;RO=3541;RPL=0;RPP=302.673;RPPR=7692.19;RPR=138;RUN=1;SAF=138;SAP=302.673;SAR=0;SRF=3541;SRP=7692.19;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:548:548,0:548:18207:0:0:0,-164.964,-1638.09 0/0:510:509,1:509:16680:1:21:0,-151.425,-1498.63 0/0:374:374,0:374:12379:0:0:0,-112.585,-1113.84 0/0:557:557,0:557:18189:0:0:0,-167.674,-1636.48 0/0:783:783,0:783:25844:0:0:0,-235.706,-2325.08 0/1:908:770,137:770:25516:137:4695:-149.25,0,-2022.15 dDocent_Contig_2916 12 . T G 245.674 . AB=0.230769;ABP=35.7494;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=314;DPB=314;DPRA=0.992366;EPP=29.068;EPPR=658.795;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=460;QR=11828;RO=302;RPL=0;RPP=29.068;RPPR=658.795;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=302;SRP=658.795;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:52:52,0:52:2027:0:0:0,-15.6536,-182.638 0/0:78:78,0:78:3050:0:0:0,-23.4803,-274.594 0/0:37:37,0:37:1470:0:0:0,-11.1381,-132.546 0/0:50:50,0:50:1930:0:0:0,-15.0515,-173.909 0/1:52:40,12:40:1583:12:460:-26.0903,0,-127.05 0/0:45:45,0:45:1768:0:0:0,-13.5463,-159.347 dDocent_Contig_2917 137 . C T 8070.42 . AB=0.328267;ABP=255.845;AC=4;AF=0.333333;AN=12;AO=345;CIGAR=3M1X2M1X;DP=1408;DPB=1391.29;DPRA=0;EPP=752.168;EPPR=2137.57;GTI=0;LEN=1;MEANALT=4.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=12960;QR=35844;RO=983;RPL=0;RPP=752.168;RPPR=2137.57;RPR=345;RUN=1;SAF=0;SAP=752.168;SAR=345;SRF=0;SRP=2137.57;SRR=983;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:175:158,11,4:158:5708:11,4:395,152:0,-15.339,-477.902,-35.089,-468.747,-499.758 0|1:199:166,6,26:166:6052:6,26:229,976:-30.0101,-61.1896,-553.781,0,-475.634,-486.597 0|1:276:207,11,46:207:7580:11,46:412,1735:-79.909,-108.476,-724.651,0,-585.774,-605.671 0|0:246:218,10,17:218:7946:10,17:384,639:0,-34.099,-680.17,-13.2768,-630.828,-657.234 0|1:287:122,0,151:122:4476:0,151:0,5669:-427.677,-464.402,-830.27,0,-365.882,-320.426 0|1:225:112,0,101:112:4082:0,101:0,3789:-276.668,-310.384,-643.824,0,-333.461,-303.057 dDocent_Contig_2918 98 . N C 228.56 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=10;CIGAR=1X;DP=10;DPB=10;DPRA=0;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=231;QR=0;RO=0;RPL=10;RPP=24.725;RPPR=0;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:27:-2.56498,-0.60206,0 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:1:0,1:0:0:1:17:-1.69998,-0.30103,0 1/1:2:0,2:0:0:2:47:-4.46457,-0.60206,0 1/1:2:0,2:0:0:2:63:-5.98377,-0.60206,0 dDocent_Contig_2919 22 . A G 183.534 . AB=0.109589;ABP=292.946;AC=1;AF=0.0833333;AN=12;AO=35;CIGAR=1X;DP=1138;DPB=1138;DPRA=0.986038;EPP=79.0118;EPPR=2398.14;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.972801;PAO=0;PQA=0;PQR=0;PRO=0;QA=1397;QR=44074;RO=1103;RPL=0;RPP=79.0118;RPPR=2398.14;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=1103;SRP=2398.14;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:157:153,4:153:6096:4:162:0,-32.2948,-533.431 0/1:219:195,24:195:7829:24:950:-19.8763,0,-638.255 0/0:189:182,7:182:7290:7:285:0,-30.8703,-629.695 0/0:209:209,0:209:8385:0:0:0,-62.9153,-754.154 0/0:183:183,0:183:7260:0:0:0,-55.0885,-653.046 0/0:181:181,0:181:7214:0:0:0,-54.4864,-648.915 dDocent_Contig_2920 26 . T C 47162.1 . AB=0.331218;ABP=1250.6;AC=5;AF=0.416667;AN=12;AO=1670;CIGAR=8M1X2M;DP=5042;DPB=4731.73;DPRA=0;EPP=3629.37;EPPR=6243.82;GTI=0;LEN=1;MEANALT=8.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=66114;QR=112755;RO=2874;RPL=0;RPP=3629.37;RPPR=6243.82;RPR=1670;RUN=1;SAF=1670;SAP=3629.37;SAR=0;SRF=2874;SRP=6243.82;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:863:467,23,356:467:18246:23,356:857,14095:-1019.4,-1089.83,-2582.89,0,-1429.86,-1392.84 0|1:1015:515,9,483:515:20213:9,483:345,19102:-1416.88,-1543.6,-3203.23,0,-1634.08,-1517 0|1:614:411,16,182:411:16101:16,182:626,7218:-470.42,-542.678,-1861.81,0,-1272.52,-1269.2 0|1:869:546,37,279:546:21437:37,279:1387,11029:-743.181,-793.979,-2545.9,0,-1649.52,-1679.1 0|1:932:483,130,263:483:18939:130,263:4832,10476:-717.208,-467.303,-1985.61,0,-1162.15,-1478.29 0|0:749:452,162,107:452:17819:162,107:6095,4194:-360.349,0,-1417.27,-151.566,-1121.19,-1585.4 dDocent_Contig_2921 7 . C G 50079.2 . AB=0.46457;ABP=56.4032;AC=6;AF=0.5;AN=12;AO=2275;CIGAR=1X;DP=4897;DPB=4897;DPRA=0;EPP=4943.11;EPPR=5561.98;GTI=0;LEN=1;MEANALT=2.83333;MQM=59.3367;MQMR=59.993;NS=6;NUMALT=1;ODDS=0;PAIRED=0.992088;PAIREDR=0.998828;PAO=0;PQA=0;PQR=0;PRO=0;QA=72106;QR=98162;RO=2560;RPL=0;RPP=4943.11;RPPR=5561.98;RPR=2275;RUN=1;SAF=2275;SAP=4943.11;SAR=0;SRF=2560;SRP=5561.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:752:450,295:450:17253:295:9133:-596.622,0,-1327.41 0/1:860:469,385:469:17953:385:12243:-842.426,0,-1357.57 0/1:572:235,328:235:9049:328:10292:-751.63,0,-644.482 0/1:718:359,348:359:13799:348:11163:-791.036,0,-1028.29 0/1:919:554,354:554:21207:354:11145:-727.981,0,-1633.95 0/1:1076:493,565:493:18901:565:18130:-1309.45,0,-1381.46 dDocent_Contig_2922 144 . C T 92.8106 . AB=0.25;ABP=13.8677;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=103;DPB=103;DPRA=1.61404;EPP=16.0391;EPPR=213.643;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.927835;PAO=0;PQA=0;PQR=0;PRO=0;QA=219;QR=3663;RO=97;RPL=0;RPP=16.0391;RPPR=213.643;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=213.643;SRR=97;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:384:0:0:0,-3.0103,-34.9151 0/0:13:13,0:13:498:0:0:0,-3.91339,-45.1671 0/0:25:25,0:25:951:0:0:0,-7.52575,-85.9041 0/0:26:25,1:25:955:1:36:0,-4.2285,-82.663 0/0:9:9,0:9:295:0:0:0,-2.70927,-26.8595 0/1:20:15,5:15:580:5:183:-10.8039,0,-46.5223 dDocent_Contig_2923 11 . T C 931.474 . AB=0.110169;ABP=937.553;AC=5;AF=0.416666;AN=12;AO=85;CIGAR=1X2M;DP=841;DPB=841;DPRA=0;EPP=187.585;EPPR=1473.1;GTI=0;LEN=1;MEANALT=3.16667;MQM=59.2;MQMR=59.8907;NS=6;NUMALT=3;ODDS=0;PAIRED=0.952941;PAIREDR=0.642541;PAO=0;PQA=0;PQR=0;PRO=0;QA=3434;QR=27039;RO=677;RPL=0;RPP=187.585;RPPR=1473.1;RPR=85;RUN=1;SAF=85;SAP=187.585;SAR=0;SRF=677;SRP=1473.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:117:97,3,10,7:97:3864:3,10,7:122,405,285:-4.19471,-23.3313,-340.591,0,-308.098,-315.151,-9.88344,-317.983,-294.65,-325.939 0|1:165:137,8,16,4:137:5470:8,16,4:319,652,164:-12.5506,-27.5234,-475.607,0,-424.225,-445.68,-40.2546,-464.478,-436.959,-489.545 0|0:133:117,8,7,1:117:4696:8,7,1:325,284,40:0,-8.41424,-392.929,-11.7994,-371.916,-396.615,-31.9258,-392.043,-395.427,-418.548 0|1:173:143,17,13,0:143:5705:17,13,0:678,532,0:-12.7785,0,-464.417,-11.9173,-425.63,-477.548,-55.8258,-469.535,-481.462,-525.366 0|1:127:98,9,17,3:98:3919:9,17,3:355,682,122:-26.69,-26.9863,-346.989,0,-293.51,-317.599,-46.1269,-339.635,-312.653,-367.939 0|1:126:85,9,22,8:85:3385:9,22,8:363,879,322:-46.155,-41.8183,-317.796,0,-248.763,-272.063,-45.203,-293.967,-252.147,-321.482 dDocent_Contig_2924 1 . N G 191.887 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=6.91895;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0.2;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=195;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=1;SAP=6.91895;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:40:-3.99568,-0.30103,0 1/1:1:0,1:0:0:1:39:-3.89656,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:116:-10.8177,-0.90309,0 dDocent_Contig_2925 27 . G C 69696.5 . AB=0.616874;ABP=431.914;AC=6;AF=0.5;AN=12;AO=2230;CIGAR=1X;DP=3615;DPB=3615;DPRA=0;EPP=4845.39;EPPR=3003.99;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999552;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=89736;QR=55135;RO=1382;RPL=0;RPP=4845.39;RPPR=3003.99;RPR=2230;RUN=1;SAF=2230;SAP=4845.39;SAR=0;SRF=1382;SRP=3003.99;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:472:106,364:106:4202:364:14587:-1169.92,0,-236.408 0/1:640:184,455:184:7350:455:18247:-1447.91,0,-468.359 0/1:409:104,305:104:4153:305:12309:-983.72,0,-250.605 0/1:552:126,426:126:5021:426:17165:-1377.19,0,-285.605 0/1:827:472,355:472:18881:355:14323:-1038.96,0,-1448.75 0/1:715:390,325:390:15528:325:13105:-963.172,0,-1181.07 dDocent_Contig_2926 28 . T A 38325.2 . AB=0.731796;ABP=772.112;AC=6;AF=0.5;AN=12;AO=1206;CIGAR=1X4M;DP=1648;DPB=1648;DPRA=0;EPP=2621.81;EPPR=736.968;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.998342;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=47926;QR=13378;RO=338;RPL=0;RPP=2621.81;RPPR=736.968;RPR=1206;RUN=1;SAF=1206;SAP=2621.81;SAR=0;SRF=338;SRP=736.968;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:263:47,29,187:47:1853:29,187:1138,7412:-595.881,-516.445,-660.166,0,-58.8676,-96.16 0|1:301:60,30,210:60:2383:30,210:1185,8360:-670.263,-590.816,-777.958,0,-98.6669,-132.959 0|1:164:24,11,129:24:962:11,129:436,5168:-418.522,-389.86,-465.807,0,-43.3763,-40.4289 0|1:281:78,28,175:78:3089:28,175:1097,6920:-545.936,-479.211,-725.023,0,-164.039,-201.564 0|1:370:65,4,301:65:2545:4,301:158,11986:-967.344,-973.91,-1181.95,0,-196.244,-118.636 0|1:269:64,0,204:64:2546:0,204:0,8080:-645.799,-665.065,-874.695,0,-209.735,-148.325 dDocent_Contig_2927 141 . A G 487.796 . AB=0.13522;ABP=370.549;AC=1;AF=0.0833333;AN=12;AO=59;CIGAR=1X;DP=1702;DPB=1702;DPRA=1.30679;EPP=131.127;EPPR=3568.57;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999391;PAO=0;PQA=0;PQR=0;PRO=0;QA=2199;QR=62972;RO=1642;RPL=0;RPP=131.127;RPPR=3568.57;RPR=59;RUN=1;SAF=0;SAP=131.127;SAR=59;SRF=0;SRP=3568.57;SRR=1642;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:396:396,0:396:15215:0:0:0,-119.208,-1368.38 0/0:336:323,13:323:12424:13:490:0,-56.7101,-1073.01 0/0:433:431,2:431:16472:2:81:0,-122.66,-1473.69 0/1:318:275,43:275:10584:43:1620:-50.3025,0,-856.256 0/0:75:74,0:74:2826:0:0:0,-22.2762,-254.308 0/0:144:143,1:143:5451:1:8:0,-42.5483,-489.687 dDocent_Contig_2928 209 . N G 74.0456 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=78;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:78:-7.40347,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_2929 66 . A C 481.728 . AB=0.148936;ABP=254.578;AC=2;AF=0.166667;AN=12;AO=46;CIGAR=1X;DP=1034;DPB=1034;DPRA=1.03543;EPP=102.898;EPPR=2146.25;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1704;QR=39253;RO=987;RPL=46;RPP=102.898;RPPR=2146.25;RPR=0;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=987;SRP=2146.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:107:92,15:92:3668:15:567:-19.1401,0,-297.937 0/0:59:59,0:59:2342:0:0:0,-17.7608,-210.938 0/1:128:108,20:108:4312:20:783:-32.2546,0,-349.502 0/0:74:74,0:74:2910:0:0:0,-22.2762,-262.003 0/0:375:374,0:374:14887:0:0:0,-112.585,-1338.33 0/0:291:280,11:280:11134:11:354:0,-55.4497,-969.176 dDocent_Contig_2930 18 . T G 17200.4 . AB=0.522124;ABP=4.93196;AC=9;AF=0.75;AN=12;AO=553;CIGAR=1X2M1X9M;DP=810;DPB=783.077;DPRA=0;EPP=1203.83;EPPR=244.044;GTI=0;LEN=1;MEANALT=6.16667;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=20486;QR=4243;RO=111;RPL=0;RPP=1203.83;RPPR=244.044;RPR=553;RUN=1;SAF=553;SAP=1203.83;SAR=0;SRF=111;SRP=244.044;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:86:23,10,9,37,6:23:879:10,9,37,6:382,331,1392,231:-107.127,-82.7061,-151.82,-86.9895,-127.769,-156.404,0,-40.7803,-45.0645,-60.9864,-95.0839,-135.864,-140.146,-53.1578,-165.402 1|1:127:22,23,6,72,2:22:840:23,6,72,2:866,227,2631,75:-210.384,-146.046,-208.043,-198.397,-196.356,-265.51,-2.03849,0,-52.3518,-49.2877,-210.863,-208.823,-261.173,-64.8184,-279.181 0|1:135:33,8,9,75,2:33:1266:8,9,75,2:309,331,2798,77:-219.136,-203.69,-305.193,-202.008,-280.54,-303.209,0,-78.5322,-76.8516,-81.334,-222.747,-301.279,-299.596,-97.5887,-326.056 0|1:104:29,8,9,52,4:29:1102:8,9,52,4:305,330,1937,157:-149.825,-133.532,-221.498,-131.583,-196.935,-219.247,0,-65.3533,-63.4055,-74.7217,-145.641,-210.993,-209.044,-77.4619,-234.811 1|1:218:2,0,11,199,1:2:77:0,11,199,1:0,391,7362,38:-655.236,-655.838,-662.161,-623.98,-630.302,-626.991,-53.5788,-59.905,-28.0425,0,-652.722,-659.044,-627.186,-56.787,-658.743 1|1:140:2,0,4,118,11:2:79:0,4,118,11:0,154,4366,428:-385.558,-386.16,-392.661,-373.515,-380.017,-378.813,-29.0197,-35.5215,-22.8776,0,-350.987,-357.488,-344.844,-0.347256,-354.177 dDocent_Contig_2931 175 . A C 147.684 . AB=0.141026;ABP=90.3146;AC=1;AF=0.0833333;AN=12;AO=23;CIGAR=1X;DP=509;DPB=509;DPRA=0.853723;EPP=52.9542;EPPR=1058.35;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.94856;PAO=0;PQA=0;PQR=0;PRO=0;QA=928;QR=19432;RO=486;RPL=23;RPP=52.9542;RPPR=1058.35;RPR=0;RUN=1;SAF=0;SAP=52.9542;SAR=23;SRF=0;SRP=1058.35;SRR=486;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:80:79,1:79:3156:1:41:0,-19.9878,-280.014 0/0:100:100,0:100:3978:0:0:0,-30.103,-358.008 0/0:75:71,4:71:2829:4:163:0,-7.51882,-239.65 0/1:78:67,11:67:2673:11:438:-16.291,0,-217.217 0/0:88:88,0:88:3557:0:0:0,-26.4906,-320.146 0/0:88:81,7:81:3239:7:286:0,-0.375821,-265.455 dDocent_Contig_2932 135 . A G 720.248 . AB=0.382716;ABP=12.6881;AC=1;AF=0.0833333;AN=12;AO=31;CIGAR=1X;DP=1192;DPB=1192;DPRA=0.364536;EPP=70.3259;EPPR=2517.58;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9845;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990501;PAO=0;PQA=0;PQR=0;PRO=0;QA=1085;QR=43829;RO=1158;RPL=0;RPP=70.3259;RPPR=2517.58;RPR=31;RUN=1;SAF=0;SAP=70.3259;SAR=31;SRF=0;SRP=2517.58;SRR=1158;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:206:206,0:206:7806:0:0:0,-62.0122,-702.363 0/0:271:270,0:270:10148:0:0:0,-81.2781,-912.561 0/0:166:165,0:165:6237:0:0:0,-49.6699,-561.181 0/0:262:261,0:261:9965:0:0:0,-78.5688,-896.123 0/1:81:50,31:50:1904:31:1085:-73.5477,0,-147.22 0/0:206:206,0:206:7769:0:0:0,-62.0122,-699.034 dDocent_Contig_2934 23 . T G 73.6644 . AB=0.108911;ABP=137.19;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=319;DPB=319;DPRA=1.27222;EPP=39.9253;EPPR=658.795;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.652318;PAO=0;PQA=0;PQR=0;PRO=0;QA=687;QR=12109;RO=302;RPL=0;RPP=39.9253;RPPR=658.795;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=302;SRP=658.795;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:50,0:50:1995:0:0:0,-15.0515,-179.736 0/0:61:57,4:57:2269:4:159:0,-3.67108,-189.684 0/0:67:65,2:65:2604:2:81:0,-12.4833,-226.801 0/0:40:40,0:40:1625:0:0:0,-12.0412,-146.474 0/1:55:49,6:49:1984:6:243:-5.69153,0,-162.187 0/1:46:41,5:41:1632:5:204:-4.89665,0,-133.263 dDocent_Contig_2935 50 . A T 1963.85 . AB=0.108586;ABP=3164.81;AC=3;AF=0.25;AN=12;AO=364;CIGAR=1X;DP=5088;DPB=5088;DPRA=0;EPP=793.426;EPPR=10256.7;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999788;PAO=0;PQA=0;PQR=0;PRO=0;QA=14318;QR=187300;RO=4722;RPL=364;RPP=793.426;RPPR=10256.7;RPR=0;RUN=1;SAF=364;SAP=793.426;SAR=0;SRF=4722;SRP=10256.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:728:695,33:695:27550:33:1286:0,-103.151,-2361.14 0/0:854:808,46:808:32042:46:1798:0,-95.0396,-2718.9 0/1:714:636,77:636:25240:77:3037:-58.689,0,-2054.72 0/1:716:616,100:616:24437:100:3916:-136.903,0,-1981.76 0/0:1130:1103,27:1103:43747:27:1053:0,-245.107,-3838.17 0/1:946:864,81:864:34284:81:3228:-6.01497,0,-2797.91 dDocent_Contig_2936 30 . G T 77.555 . AB=0.104762;ABP=145.48;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=700;DPB=700;DPRA=0.941176;EPP=39.9253;EPPR=1483.95;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992669;PAO=0;PQA=0;PQR=0;PRO=0;QA=688;QR=27213;RO=682;RPL=0;RPP=39.9253;RPPR=1483.95;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=682;SRP=1483.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:105:94,11:94:3686:11:447:-8.97735,0,-300.149 0/0:119:113,6:113:4513:6:241:0,-13.7563,-384.034 0/0:196:195,0:195:7851:0:0:0,-58.7008,-705.727 0/0:69:69,0:69:2756:0:0:0,-20.7711,-248.155 0/0:131:131,0:131:5237:0:0:0,-39.4349,-471.178 0/0:80:80,0:80:3170:0:0:0,-24.0824,-285.377 dDocent_Contig_2937 24 . T A 477.593 . AB=0.119777;ABP=453.812;AC=1;AF=0.0833333;AN=12;AO=43;CIGAR=1X;DP=1790;DPB=1790;DPRA=1.25437;EPP=96.3836;EPPR=3796.57;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997138;PAO=0;PQA=0;PQR=0;PRO=0;QA=1746;QR=70065;RO=1747;RPL=0;RPP=96.3836;RPPR=3796.57;RPR=43;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=1747;SRP=3796.57;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:347:347,0:347:13903:0:0:0,-104.457,-1250.17 0/0:211:211,0:211:8487:0:0:0,-63.5173,-763.316 0/0:199:199,0:199:8053:0:0:0,-59.905,-724.285 0/0:285:285,0:285:11348:0:0:0,-85.7935,-1020.53 0/0:389:389,0:389:15602:0:0:0,-117.101,-1402.88 0/1:359:316,43:316:12672:43:1746:-49.2821,0,-1031.44 dDocent_Contig_2938 98 . N T 91.7726 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=102;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,3:0:0:3:102:-9.17671,-0.90309,0 ./.:.:.:.:.:.:.:. dDocent_Contig_2939 12 . T A 17646 . AB=0.177305;ABP=768.2;AC=2;AF=0.166667;AN=12;AO=150;CIGAR=2X1M1X;DP=846;DPB=846;DPRA=0;EPP=328.731;EPPR=311.359;GTI=0;LEN=1;MEANALT=3.33333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5811;QR=5511;RO=142;RPL=0;RPP=328.731;RPPR=311.359;RPR=150;RUN=1;SAF=150;SAP=328.731;SAR=0;SRF=142;SRP=311.359;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:90:35,0,16,38:35:1367:0,16,38:0,618,1536:-116.109,-126.645,-239.018,-75.8995,-188.269,-183.453,0,-112.378,-61.6291,-100.939 0|0:177:34,0,30,110:34:1309:0,30,110:0,1183,4311:-344.211,-354.446,-461.915,-257.115,-364.583,-355.552,0,-107.465,-10.1306,-74.3516 0|0:108:34,0,25,47:34:1347:0,25,47:0,966,1883:-144.901,-155.136,-266.007,-75.8066,-186.676,-179.15,0,-110.876,-31.5462,-96.7274 1|0:213:31,0,46,132:31:1177:0,46,132:0,1764,5237:-470.003,-479.335,-575.842,-334.569,-431.074,-417.227,-48.2641,-144.771,0,-105.035 1|0:111:7,0,11,92:7:273:0,11,92:0,425,3631:-309.099,-311.207,-333.647,-276.304,-298.744,-295.433,-12.461,-34.9038,0,-7.20908 0|0:147:1,23,22,98:1:38:23,22,98:919,855,3879:-391.502,-316.106,-312.298,-321.553,-248.972,-318.047,-72.5865,0,-5.45479,-46.2018 dDocent_Contig_2940 53 . G T 1633.21 . AB=0.135266;ABP=1198.95;AC=2;AF=0.166667;AN=12;AO=221;CIGAR=1X;DP=4069;DPB=4069;DPRA=0.592405;EPP=482.906;EPPR=8347.98;GTI=0;LEN=1;MEANALT=1.6;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.99948;PAO=0;PQA=0;PQR=0;PRO=0;QA=8395;QR=150528;RO=3843;RPL=221;RPP=482.906;RPPR=8347.98;RPR=0;RUN=1;SAF=221;SAP=482.906;SAR=0;SRF=3843;SRP=8347.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:462:388,73:388:15169:73:2791:-112.43,0,-1225.21 0/0:664:609,55:609:23768:55:2083:0,-12.1964,-1949.55 0/0:459:436,23:436:17195:23:895:0,-57.3066,-1465.34 0/1:573:503,67:503:19705:67:2507:-54.1131,0,-1600.28 0/0:1027:1027,0:1027:40364:0:0:0,-309.158,-3629.19 0/0:884:880,3:880:34327:3:119:0,-255.046,-3075.43 dDocent_Contig_2941 35 . T G 6312.34 . AB=0.220077;ABP=884.385;AC=4;AF=0.333333;AN=12;AO=318;CIGAR=1X3M;DP=2120;DPB=2218.5;DPRA=0;EPP=693.539;EPPR=3705.37;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.998827;PAO=0;PQA=0;PQR=0;PRO=0;QA=12499;QR=66548;RO=1705;RPL=0;RPP=693.539;RPPR=3705.37;RPR=318;RUN=1;SAF=318;SAP=693.539;SAR=0;SRF=1705;SRP=3705.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:313:215,0,98:215:8304:0,98:0,3910:-257.678,-322.4,-1004.34,0,-682.331,-652.831 0|1:290:227,8,51:227:8899:8,51:315,2029:-98.7414,-141.161,-870.531,0,-705.884,-716.446 0|1:256:154,20,81:154:6026:20,81:759,3138:-211.397,-195.528,-684.949,0,-433.232,-471.076 0|1:436:342,16,55:342:13301:16,55:625,2115:-70.639,-122.209,-1210.39,0,-1041.61,-1076.44 0|0:432:401,0,31:401:15697:0,31:0,1225:0,-120.713,-1411.35,-19.5362,-1310.56,-1301.23 0|0:393:366,4,2:366:14321:4,2:156,82:0,-97.3554,-1273.58,-103.408,-1268.02,-1280.24 dDocent_Contig_2942 32 . G A 424.753 . AB=0.172414;ABP=138.166;AC=2;AF=0.166667;AN=12;AO=26;CIGAR=1X;DP=447;DPB=447;DPRA=1.52542;EPP=59.4686;EPPR=917.2;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1026;QR=16718;RO=421;RPL=0;RPP=59.4686;RPPR=917.2;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=421;SRP=917.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:110:110,0:110:4399:0:0:0,-33.1133,-395.853 0/0:125:124,1:124:4920:1:41:0,-33.5342,-438.607 0/1:37:33,4:33:1319:4:156:-3.27863,0,-107.83 0/0:39:39,0:39:1548:0:0:0,-11.7402,-139.558 0/1:108:87,21:87:3450:21:829:-42.4147,0,-278.031 0/0:28:28,0:28:1082:0:0:0,-8.42884,-97.6704 dDocent_Contig_2943 31 . A G 1913.73 . AB=0.0789474;ABP=61.5258;AC=5;AF=0.416667;AN=12;AO=3;CIGAR=1X3M;DP=294;DPB=294;DPRA=0.808511;EPP=9.52472;EPPR=452.505;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.990338;PAO=0;PQA=0;PQR=0;PRO=0;QA=121;QR=7869;RO=207;RPL=0;RPP=9.52472;RPPR=452.505;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=207;SRP=452.505;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:44:8,36,0:8:300:36,0:1319,0:-105.748,0,-14.1075,-108.156,-24.9446,-132.727 0|1:68:55,12,0:55:2054:12,0:464,0:-21.5422,0,-164.515,-38.0989,-168.127,-206.241 0|1:38:28,7,3:28:1102:7,3:262,121:-13.0056,0,-88.5357,-11.4517,-80.668,-101.216 0|1:54:34,20,0:34:1305:20,0:729,0:-49.6745,0,-101.48,-59.9096,-107.5,-167.039 0|1:43:36,7,0:36:1363:7,0:258,0:-10.6246,0,-110.008,-21.4617,-112.115,-133.207 0|0:47:46,1,0:46:1745:1,0:32,0:0,-10.9491,-154.095,-13.8474,-154.396,-156.973 dDocent_Contig_2944 27 . G C 20490 . AB=0.795699;ABP=214.904;AC=9;AF=0.75;AN=12;AO=606;CIGAR=1X;DP=672;DPB=672;DPRA=0;EPP=1318.92;EPPR=146.327;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.993399;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=24126;QR=2597;RO=66;RPL=0;RPP=1318.92;RPPR=146.327;RPR=606;RUN=1;SAF=606;SAP=1318.92;SAR=0;SRF=66;SRP=146.327;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:96:27,69:27:1041:69:2759:-219.523,0,-65.0756 1/1:123:9,114:9:363:114:4538:-375.31,-3.99351,0 0/1:85:14,71:14:572:71:2854:-231.365,0,-26.234 0/1:98:16,82:16:621:82:3269:-264.769,0,-26.72 1/1:118:0,118:0:0:118:4698:-422.745,-35.5215,0 1/1:152:0,152:0:0:152:6008:-540.506,-45.7566,0 dDocent_Contig_2945 7 . C A 35.6637 . AB=0.0962343;ABP=341.442;AC=3;AF=0.25;AN=12;AO=41;CIGAR=1X;DP=532;DPB=532;DPRA=0;EPP=92.0407;EPPR=1067.03;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997959;PAO=0;PQA=0;PQR=0;PRO=0;QA=1567;QR=18802;RO=490;RPL=0;RPP=92.0407;RPPR=1067.03;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=490;SRP=1067.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:66:60,6:60:2318:6:228:-1.01674,0,-188.965 0/0:76:69,6:69:2656:6:227:0,-2.13918,-218.439 0/1:51:46,5:46:1771:5:188:-1.9302,0,-144.291 0/0:81:77,4:77:2965:4:156:0,-9.96614,-252.598 0/1:122:110,12:110:4207:12:460:-5.02495,0,-341.98 0/0:136:128,8:128:4885:8:308:0,-12.8583,-411.593 dDocent_Contig_2946 13 . T C 111060 . AB=0.354738;ABP=650.907;AC=12;AF=1;AN=12;AO=1254;CIGAR=1X3M;DP=3535;DPB=3535;DPRA=0;EPP=2726.04;EPPR=148.499;GTI=0;LEN=1;MEANALT=2.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.22045e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=50133;QR=2661;RO=67;RPL=0;RPP=2726.04;RPPR=148.499;RPR=1254;RUN=1;SAF=1254;SAP=2726.04;SAR=0;SRF=67;SRP=148.499;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:550:16,259,273:16:632:259,273:10243,10966:-1689.68,-851.597,-825.634,-790.903,0,-760.726 1|1:672:17,391,263:17:678:391,263:15614,10483:-2088.24,-807.366,-745.499,-1230.15,0,-1206.82 1|1:501:25,238,238:25:990:238,238:9433,9504:-1470.12,-701.251,-711.084,-694.915,0,-704.748 1|1:547:6,264,277:6:240:264,277:10506,11066:-1754.84,-891.617,-831.915,-845.26,0,-781.644 1|1:590:0,486,103:0:0:486,103:19357,4102:-1931.69,-337.798,-191.498,-1593.94,0,-1562.94 1|1:675:3,570,100:3:121:570,100:22631,4012:-2182.63,-320.581,-158.968,-1852.98,0,-1832.85 dDocent_Contig_2947 72 . G A 44.7305 . AB=0.16;ABP=28.1125;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=222;DPB=222;DPRA=0.923077;EPP=29.068;EPPR=459.02;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.490476;PAO=0;PQA=0;PQR=0;PRO=0;QA=417;QR=7967;RO=210;RPL=12;RPP=29.068;RPPR=459.02;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=210;SRP=459.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:21,4:21:777:4:143:-5.69475,0,-62.721 0/0:49:45,4:45:1691:4:151:0,-0.792796,-138.489 0/0:37:37,0:37:1421:0:0:0,-11.1381,-128.168 0/0:41:38,3:38:1440:3:115:0,-1.6175,-119.149 0/0:29:28,1:28:1058:1:8:0,-7.92987,-94.7178 0/0:41:41,0:41:1580:0:0:0,-12.3422,-142.462 dDocent_Contig_2948 92 . T C 142055 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=4639;CIGAR=1X;DP=4766;DPB=4766;DPRA=0;EPP=10076.5;EPPR=272.273;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999784;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=162119;QR=4227;RO=124;RPL=4639;RPP=10076.5;RPPR=272.273;RPR=0;RUN=1;SAF=4639;SAP=10076.5;SAR=0;SRF=124;SRP=272.273;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:735:66,668:66:2246:668:22917:-1859.7,-18.9,0 1/1:931:24,907:24:808:907:31348:-2747.57,-207.23,0 1/1:434:6,428:6:211:428:15180:-1346.6,-111.313,0 1/1:719:10,709:10:354:709:25069:-2223.36,-184.241,0 1/1:1059:18,1040:18:608:1040:36408:-3220.65,-263.538,0 1/1:888:0,887:0:0:887:31197:-2806.8,-267.014,0 dDocent_Contig_2949 7 . C T 430.709 . AB=0.150215;ABP=250.623;AC=5;AF=0.416667;AN=12;AO=38;CIGAR=1X;DP=275;DPB=275;DPRA=0;EPP=85.5263;EPPR=517.649;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.710526;PAIREDR=0.751055;PAO=0;PQA=0;PQR=0;PRO=0;QA=1441;QR=9128;RO=237;RPL=0;RPP=85.5263;RPPR=517.649;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=237;SRP=517.649;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:42:39,3:39:1503:3:117:0,-1.73288,-124.632 0/1:46:40,6:40:1527:6:232:-7.40168,0,-123.855 0/1:44:40,4:40:1541:4:149:-0.527011,0,-125.716 0/1:30:19,11:19:740:11:410:-28.2141,0,-57.9001 0/1:45:40,5:40:1547:5:184:-3.37076,0,-125.954 0/1:68:59,9:59:2270:9:349:-11.3007,0,-184.046 dDocent_Contig_2950 109 . G A 85.9727 . AB=0.2;ABP=26.4622;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=327;DPB=327;DPRA=0.868421;EPP=18.2106;EPPR=695.71;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996865;PAO=0;PQA=0;PQR=0;PRO=0;QA=216;QR=10778;RO=319;RPL=0;RPP=18.2106;RPPR=695.71;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=695.71;SRR=319;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:50,0:50:1717:0:0:0,-15.0515,-154.818 0/0:115:114,0:114:3832:0:0:0,-34.3174,-344.842 0/0:69:68,1:68:2277:1:7:0,-20.0711,-204.495 0/0:51:51,0:51:1722:0:0:0,-15.3525,-155.261 0/1:30:24,6:24:813:6:209:-10.1202,0,-64.4528 0/0:12:12,0:12:417:0:0:0,-3.61236,-37.8633 dDocent_Contig_2951 42 . A T 1022.76 . AB=0.0722892;ABP=134.895;AC=0;AF=0;AN=12;AO=6;CIGAR=4M1X1M;DP=156;DPB=178;DPRA=0.813725;EPP=16.0391;EPPR=231.015;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.87619;PAO=0;PQA=0;PQR=0;PRO=0;QA=241;QR=4136;RO=105;RPL=0;RPP=16.0391;RPPR=231.015;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=105;SRP=231.015;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:13:11,2,0:11:437:2,0:75,0:-3.20695,0,-35.7731,-6.51828,-36.3751,-42.5153 0|0:40:28,9,2:28:1097:9,2:351,78:-20.4999,0,-87.5901,-22.5119,-83.887,-112.138 0|0:34:32,2,0:32:1265:2,0:74,0:0,-3.20925,-107.103,-9.63296,-107.705,-113.758 0|0:26:19,7,0:19:746:7,0:277,0:-17.4719,0,-59.64,-23.1915,-61.7472,-84.5443 0|0:26:8,17,1:8:319:17,1:644,41:-50.3565,0,-21.1434,-49.3789,-22.8756,-75.3551 0|0:17:7,7,3:7:272:7,3:269,122:-19.9583,0,-20.2302,-11.9956,-12.2688,-33.4446 dDocent_Contig_2952 9 . T A 916.962 . AB=0.102019;ABP=2592.17;AC=3;AF=0.25;AN=12;AO=281;CIGAR=1X;DP=3576;DPB=3576;DPRA=0;EPP=613.194;EPPR=7151.5;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=59.9945;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10750;QR=126214;RO=3292;RPL=0;RPP=613.194;RPPR=7151.5;RPR=281;RUN=1;SAF=281;SAP=613.194;SAR=0;SRF=3292;SRP=7151.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:702:655,46:655:25057:46:1776:0,-51.1235,-2093.6 0/1:642:580,62:580:22219:62:2385:-21.5984,0,-1805.08 0/0:356:354,2:354:13594:2:78:0,-99.7632,-1215.44 0/0:636:595,41:595:22797:41:1535:0,-53.0367,-1912.03 0/1:725:641,84:641:24658:84:3208:-70.6253,0,-1999.53 0/1:515:467,46:467:17889:46:1768:-4.69422,0,-1454.41 dDocent_Contig_2953 13 . C T 34.2959 . AB=0.1;ABP=100.292;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=584;DPB=584;DPRA=1.08995;EPP=22.5536;EPPR=1238.59;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.977312;PAO=0;PQA=0;PQR=0;PRO=0;QA=366;QR=23158;RO=573;RPL=0;RPP=22.5536;RPPR=1247.26;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=572;SRP=1238.59;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:81:81,0:81:3271:0:0:0,-24.3834,-294.435 0/0:136:133,2:133:5404:2:81:0,-33.3611,-478.47 0/0:53:52,0:52:2106:0:0:0,-15.6536,-189.595 0/0:90:90,0:90:3642:0:0:0,-27.0927,-327.783 0/1:70:63,7:63:2537:7:285:-4.95231,0,-207.386 0/0:154:154,0:154:6198:0:0:0,-46.3586,-557.546 dDocent_Contig_2954 35 . C T 107.994 . AB=0.277778;ABP=10.7311;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=126;DPB=126;DPRA=0.833333;EPP=13.8677;EPPR=265.758;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=193;QR=4734;RO=121;RPL=0;RPP=13.8677;RPPR=265.758;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=121;SRP=265.758;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:31,0:31:1224:0:0:0,-9.33193,-110.441 0/0:50:50,0:50:1942:0:0:0,-15.0515,-174.998 0/0:11:11,0:11:430:0:0:0,-3.31133,-39.0455 0/1:18:13,5:13:512:5:193:-12.3222,0,-41.0095 0/0:5:5,0:5:201:0:0:0,-1.50515,-18.4711 0/0:11:11,0:11:425:0:0:0,-3.31133,-38.5968 dDocent_Contig_2955 98 . N G 435.136 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=17;CIGAR=1X;DP=17;DPB=17;DPRA=0;EPP=39.9253;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0.764706;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=461;QR=0;RO=0;RPL=17;RPP=39.9253;RPPR=0;RPR=0;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:5:0,5:0:0:5:96:-8.83051,-1.50515,0 1/1:6:0,6:0:0:6:185:-16.953,-1.80618,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:1:0,1:0:0:1:17:-1.69998,-0.30103,0 1/1:4:0,4:0:0:4:129:-11.9295,-1.20412,0 dDocent_Contig_2956 12 . A G 2431.32 . AB=0.2494;ABP=230.473;AC=2;AF=0.166667;AN=12;AO=131;CIGAR=1X;DP=1185;DPB=1185;DPRA=0;EPP=287.473;EPPR=2291.74;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999051;PAO=0;PQA=0;PQR=0;PRO=0;QA=5208;QR=41478;RO=1054;RPL=0;RPP=287.473;RPPR=2291.74;RPR=131;RUN=1;SAF=131;SAP=287.473;SAR=0;SRF=1054;SRP=2291.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:162:156,6:156:6106:6:235:0,-27.2466,-527.838 0/0:181:172,9:172:6747:9:362:0,-21.5427,-574.022 0/0:245:242,3:242:9644:3:122:0,-62.3799,-855.998 0/0:180:171,9:171:6730:9:361:0,-21.3324,-572.597 0/1:233:158,75:158:6156:75:3007:-200.574,0,-483.698 0/1:184:155,29:155:6095:29:1121:-45.7806,0,-492.962 dDocent_Contig_2957 7 . T C 130782 . AB=0.898839;ABP=836.168;AC=11;AF=0.916667;AN=12;AO=3990;CIGAR=1X;DP=4206;DPB=4206;DPRA=0;EPP=8667.19;EPPR=459.02;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=59.6667;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=153153;QR=8003;RO=210;RPL=0;RPP=8667.19;RPPR=459.02;RPR=3990;RUN=1;SAF=3990;SAP=8667.19;SAR=0;SRF=210;SRP=459.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:603:61,542:61:2298:542:20816:-1690.76,0,-25.5141 1/1:737:59,678:59:2256:678:26036:-2138.47,-18.6287,0 1/1:456:9,444:9:339:444:17004:-1498.65,-105.901,0 1/1:531:37,493:37:1430:493:18895:-1571.35,-31.4543,0 1/1:955:44,911:44:1680:911:35049:-3000.73,-136.021,0 1/1:924:0,922:0:0:922:35353:-3179.42,-277.55,0 dDocent_Contig_2958 9 . T G 21543.1 . AB=0.492652;ABP=3.7443;AC=6;AF=0.5;AN=12;AO=771;CIGAR=1X;DP=1565;DPB=1565;DPRA=0;EPP=1677.22;EPPR=1727.16;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998741;PAO=0;PQA=0;PQR=0;PRO=0;QA=29294;QR=30347;RO=794;RPL=0;RPP=1677.22;RPPR=1727.16;RPR=771;RUN=1;SAF=771;SAP=1677.22;SAR=0;SRF=794;SRP=1727.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:280:154,126:154:5830:126:4775:-345.501,0,-440.374 0/1:237:163,74:163:6246:74:2797:-180.568,0,-490.716 0/1:212:127,85:127:4841:85:3241:-228.017,0,-371.905 0/1:278:147,131:147:5640:131:4998:-366.154,0,-423.88 0/1:263:130,133:130:4981:133:5071:-377.235,0,-369.138 0/1:295:73,222:73:2809:222:8412:-668.059,0,-164.182 dDocent_Contig_2959 12 . C A 5737.78 . AB=0.33694;ABP=152.432;AC=6;AF=0.5;AN=12;AO=218;CIGAR=1X;DP=647;DPB=647;DPRA=0;EPP=476.391;EPPR=925.886;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.963303;PAIREDR=0.790588;PAO=0;PQA=0;PQR=0;PRO=0;QA=8643;QR=16694;RO=425;RPL=0;RPP=476.391;RPPR=925.886;RPR=218;RUN=1;SAF=218;SAP=476.391;SAR=0;SRF=425;SRP=925.886;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:102:66,33:66:2607:33:1296:-86.6983,0,-204.561 0/1:145:106,39:106:4161:39:1583:-99.0502,0,-330.83 0/1:125:60,65:60:2373:65:2536:-190.755,0,-176.103 0/1:125:92,33:92:3607:33:1314:-80.8933,0,-287.05 0/1:78:59,18:59:2318:18:724:-41.8964,0,-185.195 0/1:72:42,30:42:1628:30:1190:-85.7071,0,-125.087 dDocent_Contig_2960 43 . A C 5266.37 . AB=0.052381;ABP=368.479;AC=0;AF=0;AN=12;AO=11;CIGAR=7M1X10M;DP=946;DPB=833.667;DPRA=0;EPP=26.8965;EPPR=1440.53;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.995468;PAO=0;PQA=0;PQR=0;PRO=0;QA=417;QR=25825;RO=662;RPL=0;RPP=26.8965;RPPR=1440.53;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=662;SRP=1440.53;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:102:73,7,22,0:73:2863:7,22,0:268,824,0:-45.4879,-45.474,-278.829,0,-213.471,-228.834,-67.4631,-280.936,-235.457,-302.923 0|0:184:164,1,19,0:164:6363:1,19,0:41,692,0:-7.10183,-53.0844,-575.574,0,-519.364,-517.028,-56.4707,-575.875,-522.748,-579.26 0|0:196:175,2,18,0:175:6811:2,18,0:80,649,0:-0.234012,-46.3206,-605.474,0,-553.128,-554.3,-52.9143,-606.076,-559.718,-612.666 0|0:133:103,4,24,0:103:4008:4,24,0:161,855,0:-38.6365,-56.3672,-384.568,0,-316.114,-322.159,-69.6426,-385.772,-329.383,-399.042 0|0:121:68,0,50,0:68:2656:0,50,0:0,1887,0:-134.141,-154.611,-372.961,0,-218.332,-203.281,-154.611,-372.961,-218.332,-372.961 0|0:210:79,4,114,11:79:3124:4,114,11:160,4099,417:-310.491,-321.091,-576.995,0,-243.922,-222.785,-300.088,-544.017,-222.922,-553.886 dDocent_Contig_2962 17 . A T 6964.7 . AB=0.327522;ABP=210.501;AC=2;AF=0.166667;AN=12;AO=312;CIGAR=1X;DP=1795;DPB=1795;DPRA=1.73011;EPP=680.51;EPPR=3221.13;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.996795;PAIREDR=0.997301;PAO=0;PQA=0;PQR=0;PRO=0;QA=12369;QR=58968;RO=1482;RPL=0;RPP=680.51;RPPR=3221.13;RPR=312;RUN=1;SAF=312;SAP=680.51;SAR=0;SRF=1482;SRP=3221.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:186:186,0:186:7331:0:0:0,-55.9916,-659.449 0/0:304:283,21:283:11269:21:828:0,-16.6792,-938.626 0/0:142:141,1:141:5660:1:27:0,-40.0465,-506.5 0/1:368:292,75:292:11619:75:2990:-158.334,0,-934.066 0/1:435:247,188:247:9798:188:7474:-541.358,0,-750.262 0/0:360:333,27:333:13291:27:1050:0,-13.583,-1100.43 dDocent_Contig_2963 64 . A G 3098.81 . AB=0.218373;ABP=460.445;AC=2;AF=0.166667;AN=12;AO=160;CIGAR=1X;DP=1599;DPB=1599;DPRA=1.36364;EPP=350.446;EPPR=3125.59;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6283;QR=57060;RO=1438;RPL=160;RPP=350.446;RPPR=3125.59;RPR=0;RUN=1;SAF=160;SAP=350.446;SAR=0;SRF=1438;SRP=3125.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:223:220,3:220:8653:3:120:0,-55.9424,-767.081 0/0:270:270,0:270:10729:0:0:0,-81.2781,-964.908 0/0:159:159,0:159:6350:0:0:0,-47.8638,-571.231 0/0:283:271,12:271:10772:12:468:0,-42.7266,-926.302 0/1:289:224,65:224:8906:65:2549:-142.546,0,-714.026 0/1:375:294,80:294:11650:80:3146:-170.556,0,-935.047 dDocent_Contig_2964 8 . T A 191.387 . AB=0.121212;ABP=249.769;AC=2;AF=0.166667;AN=12;AO=24;CIGAR=1X;DP=405;DPB=405;DPRA=1.91304;EPP=55.1256;EPPR=830.341;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=903;QR=14647;RO=381;RPL=0;RPP=55.1256;RPPR=830.341;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=381;SRP=830.341;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:57:57,0:57:2164:0:0:0,-17.1587,-194.989 0/1:49:43,6:43:1663:6:228:-6.13299,0,-135.181 0/1:149:131,18:131:5063:18:675:-16.2276,0,-410.822 0/0:63:63,0:63:2417:0:0:0,-18.9649,-217.738 0/0:42:42,0:42:1601:0:0:0,-12.6433,-144.359 0/0:45:45,0:45:1739:0:0:0,-13.5463,-156.766 dDocent_Contig_2965 25 . A C 85.6921 . AB=0.142857;ABP=57.2971;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=306;DPB=306;DPRA=0.943396;EPP=31.2394;EPPR=639.252;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.769231;PAIREDR=0.825939;PAO=0;PQA=0;PQR=0;PRO=0;QA=513;QR=11702;RO=293;RPL=0;RPP=31.2394;RPPR=639.252;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=293;SRP=639.252;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:43:40,3:40:1588:3:119:0,-1.84911,-132.059 0/0:54:53,1:53:2113:1:41:0,-12.1611,-186.255 0/1:49:42,7:42:1690:7:272:-10.0921,0,-137.571 0/0:45:45,0:45:1790:0:0:0,-13.5463,-161.318 0/0:54:52,2:52:2065:2:81:0,-8.56989,-178.339 0/0:61:61,0:61:2456:0:0:0,-18.3628,-221.182 dDocent_Contig_2967 49 . A G 443.419 . AB=0.122024;ABP=419.959;AC=2;AF=0.166667;AN=12;AO=50;CIGAR=1X;DP=956;DPB=956;DPRA=1.02972;EPP=111.584;EPPR=1856.9;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1993;QR=35848;RO=905;RPL=0;RPP=111.584;RPPR=1856.9;RPR=50;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=905;SRP=1968.19;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:95:95,0:95:3795:0:0:0,-28.5978,-341.554 0/0:149:140,9:140:5530:9:363:0,-11.8194,-464.501 0/0:150:149,0:149:5880:0:0:0,-44.8535,-528.802 0/1:130:106,24:106:4203:24:941:-45.8632,0,-339.105 0/0:226:226,0:226:8969:0:0:0,-68.0328,-806.688 0/1:206:189,17:189:7471:17:689:-0.326729,0,-609.999 dDocent_Contig_2968 107 . N T 198.512 . AB=0;ABP=0;AC=8;AF=0.8;AN=10;AO=8;CIGAR=1X;DP=10;DPB=10;DPRA=2.25;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=2.1684e-19;PAIRED=0.75;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=204;QR=0;RO=0;RPL=0;RPP=20.3821;RPPR=0;RPR=8;RUN=1;SAF=0;SAP=20.3821;SAR=8;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,3:0:0:3:81:-7.40103,-0.90309,0 1/1:3:0,3:0:0:3:95:-8.86456,-0.90309,0 ./.:.:.:.:.:.:.:. 0/0:1:0,0:0:0:0:0:0,0,0 1/1:1:0,1:0:0:1:13:-1.29999,-0.30103,0 1/1:1:0,1:0:0:1:15:-1.49999,-0.30103,0 dDocent_Contig_2969 43 . G A 24889.7 . AB=0.383825;ABP=276.975;AC=6;AF=0.5;AN=12;AO=897;CIGAR=1X;DP=2337;DPB=2337;DPRA=0;EPP=1950.82;EPPR=3023.53;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0.99777;PAIREDR=0.987779;PAO=0;PQA=0;PQR=0;PRO=0;QA=35463;QR=55504;RO=1391;RPL=0;RPP=1950.82;RPPR=3023.53;RPR=897;RUN=1;SAF=897;SAP=1950.82;SAR=0;SRF=1391;SRP=3023.53;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:320:172,134:172:6796:134:5310:-385.255,0,-518.799 0/1:461:345,107:345:13789:107:4197:-241.239,0,-1103.5 0/1:146:106,40:106:4236:40:1581:-98.5694,0,-337.233 0/1:318:234,84:234:9388:84:3315:-202.687,0,-748.599 0/1:538:174,355:174:6938:355:14022:-1101.38,0,-464.472 0/1:554:360,177:360:14357:177:7038:-471.058,0,-1128.98 dDocent_Contig_2970 10 . G A 71.2298 . AB=0.108911;ABP=137.19;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=505;DPB=505;DPRA=1.32237;EPP=33.4109;EPPR=1069.2;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.959267;PAO=0;PQA=0;PQR=0;PRO=0;QA=551;QR=19667;RO=491;RPL=0;RPP=33.4109;RPPR=1069.2;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=491;SRP=1069.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:75:75,0:75:3007:0:0:0,-22.5772,-270.713 0/0:105:105,0:105:4226:0:0:0,-31.6081,-380.281 0/0:52:52,0:52:2071:0:0:0,-15.6536,-186.568 0/0:72:72,0:72:2879:0:0:0,-21.6742,-259.21 0/1:101:90,11:90:3629:11:430:-8.64585,0,-296.219 0/0:100:97,3:97:3855:3:121:0,-18.8228,-335.659 dDocent_Contig_2971 55 . T A 4685.44 . AB=0.292383;ABP=155.392;AC=6;AF=0.5;AN=12;AO=189;CIGAR=1X;DP=827;DPB=827;DPRA=0;EPP=413.419;EPPR=1388.41;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.867725;PAIREDR=0.996865;PAO=0;PQA=0;PQR=0;PRO=0;QA=7169;QR=24015;RO=638;RPL=189;RPP=413.419;RPPR=1388.41;RPR=0;RUN=1;SAF=189;SAP=413.419;SAR=0;SRF=638;SRP=1388.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:40:15,25:15:555:25:939:-72.7794,0,-38.2402 1/1:58:1,57:1:34:57:2105:-186.283,-14.0608,0 0/1:34:9,25:9:358:25:974:-77.7244,0,-22.3477 0/1:64:21,43:21:816:43:1674:-131.63,0,-54.4854 0/0:362:349,13:349:13129:13:499:0,-63.7156,-1135.83 0/1:269:243,26:243:9123:26:978:-7.34989,0,-739.831 dDocent_Contig_2972 26 . G T 859.92 . AB=0.138365;ABP=544.854;AC=2;AF=0.166667;AN=12;AO=90;CIGAR=1X;DP=1458;DPB=1458;DPRA=0.901923;EPP=198.443;EPPR=2971.41;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.776884;PAO=0;PQA=0;PQR=0;PRO=0;QA=3500;QR=53751;RO=1367;RPL=0;RPP=198.443;RPPR=2971.41;RPR=90;RUN=1;SAF=90;SAP=198.443;SAR=0;SRF=1367;SRP=2971.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:198:186,12:186:7380:12:456:0,-18.2176,-622.457 0/0:263:251,12:251:9910:12:463:0,-37.1538,-849.288 0/1:190:164,26:164:6395:26:1012:-34.1866,0,-518.101 0/1:287:246,40:246:9695:40:1569:-55.0272,0,-785.55 0/0:289:289,0:289:11276:0:0:0,-86.9977,-1014.12 0/0:231:231,0:231:9095:0:0:0,-69.5379,-818.029 dDocent_Contig_2973 86 . G A 132434 . AB=0.805617;ABP=2198.33;AC=9;AF=0.75;AN=12;AO=4542;CIGAR=1X;DP=5094;DPB=5094;DPRA=0;EPP=9865.84;EPPR=1192.98;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998899;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=157145;QR=18479;RO=548;RPL=4542;RPP=9865.84;RPPR=1192.98;RPR=0;RUN=1;SAF=4542;SAP=9865.84;SAR=0;SRF=548;SRP=1192.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:662:80,582:80:2734:582:20081:-1607.63,0,-47.0318 1/1:960:14,945:14:487:945:32754:-2902.86,-244.615,0 1/1:592:3,589:3:93:589:20468:-1833.03,-169.532,0 1/1:836:8,828:8:264:828:28404:-2531.59,-227.578,0 0/1:949:197,752:197:6679:752:26107:-2063.34,0,-315.56 0/1:1095:246,846:246:8222:846:29331:-2310.22,0,-411.217 dDocent_Contig_2974 49 . T C 1028.91 . AB=0.11807;ABP=1237.08;AC=2;AF=0.166667;AN=12;AO=115;CIGAR=1X;DP=1957;DPB=1957;DPRA=1.98169;EPP=252.73;EPPR=3987.67;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4431;QR=66458;RO=1839;RPL=0;RPP=252.73;RPPR=3987.67;RPR=115;RUN=1;SAF=115;SAP=252.73;SAR=0;SRF=1839;SRP=3996.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:178:178,0:178:6351:0:0:0,-53.5833,-571.594 0/0:279:279,0:279:10053:0:0:0,-83.9874,-904.547 0/0:261:260,0:260:9492:0:0:0,-78.2678,-853.861 0/0:265:265,0:265:9507:0:0:0,-79.7729,-855.449 0/1:362:315,46:315:11344:46:1783:-51.6394,0,-911.603 0/1:612:542,69:542:19711:69:2648:-54.4736,0,-1589.15 dDocent_Contig_2975 65 . T C 503.425 . AB=0.190476;ABP=125.337;AC=4;AF=0.333333;AN=12;AO=29;CIGAR=1X4M;DP=219;DPB=219;DPRA=1.16875;EPP=65.983;EPPR=404.733;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.482759;PAIREDR=0.502703;PAO=0;PQA=0;PQR=0;PRO=0;QA=1148;QR=7192;RO=185;RPL=29;RPP=65.983;RPPR=404.733;RPR=0;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=185;SRP=404.733;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:39:32,2,5:32:1245:2,5:79,199:-6.7548,-9.88802,-111.585,0,-95.8001,-100.796 0|1:35:26,0,9:26:1011:0,9:0,345:-20.8626,-28.6894,-111.772,0,-83.467,-80.7578 0|1:41:28,3,10:28:1095:3,10:119,400:-24.5214,-23.1553,-112.271,0,-80.2241,-87.01 0|1:32:28,0,4:28:1104:0,4:0,163:-5.42547,-13.8543,-104.675,0,-91.2262,-90.0221 0|0:32:32,0,0:32:1247:0,0:0,0:0,-9.63296,-112.507,-9.63296,-112.507,-112.507 0|0:40:39,0,1:39:1490:0,1:0,41:0,-11.7402,-133.946,-7.94663,-130.562,-130.261 dDocent_Contig_2976 7 . C T 21296.7 . AB=0.0681277;ABP=3403.47;AC=0;AF=0;AN=12;AO=143;CIGAR=1X1M1X1M1X3M1X;DP=2099;DPB=2102.56;DPRA=0;EPP=313.531;EPPR=1779.27;GTI=0;LEN=1;MEANALT=12.6667;MQM=42.1329;MQMR=59.956;NS=6;NUMALT=5;ODDS=0;PAIRED=0.748252;PAIREDR=0.466993;PAO=0;PQA=0;PQR=0;PRO=0;QA=5521;QR=31306;RO=818;RPL=0;RPP=313.531;RPPR=1779.27;RPR=143;RUN=1;SAF=143;SAP=313.531;SAR=0;SRF=818;SRP=1779.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:335:135,8,22,116,19,10:135:5149:8,22,116,19,10:314,860,4498,764,398:-328.882,-343.695,-763.693,-313.065,-709.643,-728.846,0,-396.587,-365.956,-387.493,-306.559,-703.14,-672.507,-359.45,-723.246,-336.748,-733.329,-702.696,-389.64,-696.193,-756.145 0|0:419:183,39,25,126,17,14:183:6995:39,25,126,17,14:1501,963,4843,688,548:-342.46,-274.313,-836.534,-334.447,-785.17,-900.879,0,-450.73,-510.863,-536.036,-340.818,-791.545,-851.676,-517.236,-909.662,-352.683,-803.409,-863.54,-529.101,-869.915,-922.43 0|0:290:125,15,15,90,15,0:125:4782:15,15,90,15,0:573,572,3519,595,0:-250.718,-241.335,-629.226,-264.296,-609.685,-652.18,0,-345.416,-368.374,-365.335,-239.372,-584.769,-607.723,-343.454,-627.264,-288.347,-633.742,-656.695,-392.428,-631.78,-680.752 0|0:425:144,16,32,157,22,25:144:5525:16,32,157,22,25:610,1236,6058,891,952:-452.803,-446.111,-894.305,-416.347,-819.315,-859.721,0,-402.977,-373.213,-405.755,-422.679,-825.65,-795.883,-379.544,-869.067,-418.089,-821.06,-791.293,-374.955,-797.628,-863.574 0|0:297:113,0,33,115,4,2:113:4318:0,33,115,4,2:0,1276,4411,158,82:-327.445,-361.461,-715.759,-267.077,-621.373,-611.439,0,-354.306,-259.922,-319.687,-348.46,-702.758,-608.372,-341.305,-701.554,-354.694,-708.992,-614.606,-347.539,-695.991,-708.389 0|0:333:118,0,16,153,15,13:118:4537:0,16,153,15,13:0,614,5809,606,515:-438.584,-474.105,-846.578,-431.021,-803.492,-798.675,0,-372.474,-329.391,-326.416,-424.145,-796.618,-753.532,-322.513,-792.102,-432.143,-804.616,-761.53,-330.512,-754.656,-800.703 dDocent_Contig_2977 115 . T C 516.228 . AB=0.254237;ABP=64.9157;AC=3;AF=0.25;AN=12;AO=31;CIGAR=1X2M1X10M;DP=192;DPB=190.929;DPRA=1.9;EPP=70.3259;EPPR=322.217;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.580645;PAIREDR=0.795918;PAO=0;PQA=0;PQR=0;PRO=0;QA=1015;QR=4853;RO=147;RPL=0;RPP=70.3259;RPPR=322.217;RPR=31;RUN=1;SAF=0;SAP=70.3259;SAR=31;SRF=0;SRP=322.217;SRR=147;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:28:17,10,0:17:560:10,0:346,0:-23.2516,0,-42.502,-28.3691,-45.5123,-73.6417 0|1:52:36,12,0:36:1191:12,0:369,0:-18.8362,0,-92.8313,-29.6733,-96.4437,-126.03 0|0:10:9,0,0:9:303:0,0:0,0:0,-2.70927,-27.2496,-2.70927,-27.2496,-27.2496 0|1:38:23,8,5:23:765:8,5:267,133:-14.7568,0,-59.5913,-11.2235,-51.5451,-71.6599 0|0:34:32,1,0:32:1050:1,0:33,0:0,-6.87481,-91.586,-9.63296,-91.8871,-94.5555 0|0:30:30,0,0:30:984:0,0:0,0:0,-9.0309,-88.8613,-9.0309,-88.8613,-88.8613 dDocent_Contig_2978 16 . C T 28307 . AB=0.210427;ABP=1539.8;AC=3;AF=0.25;AN=12;AO=444;CIGAR=2X2M1D1M;DP=2110;DPB=2031.5;DPRA=0;EPP=967.144;EPPR=1371.04;GTI=0;LEN=1;MEANALT=6.83333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=17564;QR=24911;RO=630;RPL=0;RPP=967.144;RPPR=1371.04;RPR=444;RUN=1;SAF=444;SAP=967.144;SAR=0;SRF=630;SRP=1371.04;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:280:78,81,109,9:78:3086:81,109,9:3189,4213,309:-330.855,-92.0117,-321.602,-8.34948,0,-229.509,-329.886,-321.536,-237.873,-581.147 0|0:385:157,42,180,3:157:6201:42,180,3:1668,7068,105:-534.006,-443.953,-941.556,0,-372.931,-456.061,-572.728,-945.659,-501.706,-1082.07 0|0:283:108,54,115,2:108:4278:54,115,2:2142,4546,57:-341.569,-197.763,-533.602,0,-175.778,-317.477,-369.591,-545.368,-347.606,-721.083 1|0:351:83,90,164,7:83:3285:90,164,7:3535,6404,246:-521.796,-256.055,-499.32,-20.3669,0,-241.357,-526.783,-506.415,-270.729,-795.033 1|0:377:108,107,123,21:108:4243:107,123,21:4256,4812,708:-364.544,-46.6383,-363.401,-1.44556,0,-313.391,-339.767,-338.323,-293.129,-682.414 0|0:434:96,70,242,20:96:3818:70,242,20:2774,9464,681:-749.145,-549.727,-843.01,0,-86.041,-241.51,-723.059,-809.097,-259.377,-1031.39 dDocent_Contig_2979 20 . T C 656.024 . AB=0.169565;ABP=221.139;AC=5;AF=0.416667;AN=12;AO=40;CIGAR=1X;DP=267;DPB=267;DPRA=0;EPP=89.8692;EPPR=495.935;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.525;PAIREDR=0.54185;PAO=0;PQA=0;PQR=0;PRO=0;QA=1621;QR=9068;RO=227;RPL=0;RPP=89.8692;RPPR=495.935;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=227;SRP=495.935;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:28,8:28:1127:8:325:-18.7823,0,-90.8725 0/1:47:35,12:35:1417:12:481:-29.4928,0,-113.629 0/1:28:25,3:25:957:3:123:-3.03595,0,-77.9833 0/1:55:46,9:46:1841:9:366:-16.7483,0,-149.337 0/0:37:36,1:36:1443:1:41:0,-7.04354,-126.025 0/1:64:57,7:57:2283:7:285:-6.75828,0,-186.364 dDocent_Contig_2980 96 . G A 14449 . AB=0.435196;ABP=33.6872;AC=7;AF=0.583333;AN=12;AO=555;CIGAR=1X;DP=1030;DPB=1030;DPRA=0;EPP=1208.18;EPPR=1034.46;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998198;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=18954;QR=16368;RO=475;RPL=555;RPP=1208.18;RPPR=1034.46;RPR=0;RUN=1;SAF=555;SAP=1208.18;SAR=0;SRF=475;SRP=1034.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:175:115,60:115:3945:60:2039:-131.105,0,-302.585 0/1:123:81,42:81:2782:42:1422:-91.2459,0,-213.607 0/1:109:63,46:63:2184:46:1555:-107.425,0,-164.021 0/1:234:160,74:160:5510:74:2518:-156.438,0,-425.622 1/1:189:0,189:0:0:189:6503:-585.402,-56.8947,0 0/1:200:56,144:56:1947:144:4917:-382.506,0,-115.306 dDocent_Contig_2981 116 . C T 939.22 . AB=0.189041;ABP=309.569;AC=3;AF=0.25;AN=12;AO=77;CIGAR=1X;DP=661;DPB=661;DPRA=1.58649;EPP=170.214;EPPR=1271.15;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2578;QR=19337;RO=584;RPL=0;RPP=170.214;RPPR=1271.15;RPR=77;RUN=1;SAF=0;SAP=170.214;SAR=77;SRF=0;SRP=1271.15;SRR=584;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:74:74,0:74:2413:0:0:0,-22.2762,-217.425 0/1:111:98,13:98:3274:13:441:-6.60115,0,-261.48 0/0:77:75,2:75:2506:2:70:0,-16.5319,-219.152 0/1:150:115,35:115:3792:35:1150:-58.6409,0,-296.344 0/1:104:83,21:83:2768:21:721:-33.9018,0,-218.065 0/0:145:139,6:139:4584:6:196:0,-25.6886,-394.791 dDocent_Contig_2982 52 . T A 154.472 . AB=0.16129;ABP=64.7922;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=300;DPB=300;DPRA=1.30252;EPP=24.725;EPPR=632.737;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=392;QR=11598;RO=290;RPL=10;RPP=24.725;RPPR=632.737;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=290;SRP=632.737;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:44,0:44:1755:0:0:0,-13.2453,-158.164 0/0:78:78,0:78:3090:0:0:0,-23.4803,-278.191 0/0:47:47,0:47:1865:0:0:0,-14.1484,-168.058 0/0:53:53,0:53:2135:0:0:0,-15.9546,-192.323 0/0:16:16,0:16:651:0:0:0,-4.81648,-58.9231 0/1:62:52,10:52:2102:10:392:-16.9701,0,-170.692 dDocent_Contig_2983 39 . A C 290.648 . AB=0.119342;ABP=308.848;AC=2;AF=0.166667;AN=12;AO=43;CIGAR=1X;DP=690;DPB=690;DPRA=0.979487;EPP=96.3836;EPPR=1405.78;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.982972;PAO=0;PQA=0;PQR=0;PRO=0;QA=1727;QR=25167;RO=646;RPL=0;RPP=96.3836;RPPR=1405.78;RPR=43;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=646;SRP=1405.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:116:113,2:113:4437:2:82:0,-27.2482,-391.531 0/0:117:117,0:117:4545:0:0:0,-35.2205,-409.029 0/0:100:96,4:96:3738:4:161:0,-15.2277,-321.601 0/0:114:106,8:106:4158:8:320:0,-5.15065,-345.06 0/1:120:107,13:107:4125:13:526:-11.5628,0,-335.149 0/1:123:107,16:107:4164:16:638:-20.7238,0,-337.748 dDocent_Contig_2985 11 . C T 169.06 . AB=0.135417;ABP=113.846;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=335;DPB=335;DPRA=2.00837;EPP=31.2394;EPPR=702.224;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=522;QR=12974;RO=322;RPL=0;RPP=31.2394;RPPR=702.224;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=322;SRP=702.224;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:32,0:32:1279:0:0:0,-9.63296,-115.373 0/0:44:44,0:44:1758:0:0:0,-13.2453,-158.426 0/0:51:51,0:51:2073:0:0:0,-15.3525,-186.74 0/0:45:45,0:45:1812:0:0:0,-13.5463,-163.289 0/0:67:67,0:67:2693:0:0:0,-20.169,-242.478 0/1:96:83,13:83:3359:13:522:-18.4288,0,-273.443 dDocent_Contig_2986 98 . N T 385.636 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=15;CIGAR=1X;DP=15;DPB=15;DPRA=0;EPP=35.5824;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=401;QR=0;RO=0;RPL=15;RPP=35.5824;RPPR=0;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:36:-3.59827,-0.30103,0 1/1:2:0,2:0:0:2:43:-4.08336,-0.60206,0 1/1:2:0,2:0:0:2:42:-3.9887,-0.60206,0 1/1:2:0,2:0:0:2:67:-6.36284,-0.60206,0 1/1:6:0,6:0:0:6:143:-13.1039,-1.80618,0 1/1:2:0,2:0:0:2:70:-6.64733,-0.60206,0 dDocent_Contig_2987 19 . T G 10561.9 . AB=0.0700902;ABP=2316.32;AC=0;AF=0;AN=12;AO=101;CIGAR=2M1X2M1D6M;DP=2447;DPB=2608.92;DPRA=0;EPP=222.329;EPPR=3423.08;GTI=0;LEN=1;MEANALT=7.75;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.977143;PAO=0;PQA=0;PQR=0;PRO=0;QA=3924;QR=61957;RO=1575;RPL=0;RPP=222.329;RPPR=3423.08;RPR=101;RUN=1;SAF=101;SAP=222.329;SAR=0;SRF=1575;SRP=3423.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:317:144,22,92,55:144:5656:22,92,55:844,3487,2102:-242.499,-216.573,-675.142,0,-395.921,-437.499,-113.398,-509.318,-292.748,-562.034 0|0:486:250,29,112,88:250:9788:29,112,88:1122,4332,3305:-280.53,-263.627,-1059.7,0,-712.644,-771.088,-85.084,-797.723,-534.1,-863.391 0|0:235:98,23,90,18:98:3894:23,90,18:893,3456,706:-254.146,-210.282,-523.953,0,-247.232,-293.503,-225.586,-472.816,-262.536,-540.763 0|0:403:189,27,93,87:189:7439:27,93,87:1065,3557,3231:-234.953,-204.218,-808.048,0,-524.332,-583.964,-27.5057,-551.833,-347.619,-613.271 0|0:503:453,0,47,0:453:17847:0,47,0:0,1824,0:-13.6335,-150,-1618.26,0,-1468.41,-1454.26,-150,-1618.26,-1468.41,-1618.26 0|0:503:441,0,56,3:441:17333:0,56,3:0,2127,116:-41.6488,-174.403,-1600.07,0,-1425.68,-1408.82,-164.874,-1590.54,-1416.15,-1589.64 dDocent_Contig_2988 33 . C T 748.292 . AB=0.104536;ABP=1380.43;AC=2;AF=0.166667;AN=12;AO=215;CIGAR=1X;DP=3325;DPB=3325;DPRA=0;EPP=469.877;EPPR=6751.95;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=1;PAIREDR=0.998713;PAO=0;PQA=0;PQR=0;PRO=0;QA=8625;QR=124365;RO=3108;RPL=0;RPP=469.877;RPPR=6751.95;RPR=215;RUN=1;SAF=215;SAP=469.877;SAR=0;SRF=3108;SRP=6751.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:572:505,67:505:20175:67:2704:-71.2802,0,-1641.82 0/0:760:705,54:705:28233:54:2177:0,-32.7901,-2342.27 0/0:386:374,12:374:14994:12:487:0,-72.0159,-1304.07 0/0:620:578,42:578:23075:42:1665:0,-36.564,-1924.6 0/0:545:543,1:543:21709:1:41:0,-160.07,-1947.82 0/1:442:403,39:403:16179:39:1551:-6.77086,0,-1321.71 dDocent_Contig_2989 32 . C T 22778.9 . AB=0.0462822;ABP=2359.69;AC=0;AF=0;AN=12;AO=61;CIGAR=1X2M1X1M;DP=1318;DPB=1318;DPRA=0;EPP=135.47;EPPR=769.54;GTI=0;LEN=1;MEANALT=3.83333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.0491803;PAIREDR=0.88102;PAO=0;PQA=0;PQR=0;PRO=0;QA=2440;QR=13919;RO=353;RPL=0;RPP=135.47;RPPR=769.54;RPR=61;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=353;SRP=769.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:170:58,5,1,104:58:2295:5,1,104:198,38,4132:-320.309,-321.472,-508.841,-334.781,-507.359,-523.354,0,-172.579,-185.888,-157.569 0|0:217:69,10,2,135:69:2749:10,2,135:400,75,5334:-413.14,-400.96,-624.319,-428.01,-621.428,-653.777,0,-193.431,-220.481,-185.743 0|0:143:25,10,0,107:25:990:10,0,107:404,0,4198:-331.136,-305.353,-383.829,-338.662,-386.839,-420.147,0,-48.1699,-81.4786,-49.2684 0|0:190:31,12,0,145:31:1237:12,0,145:478,0,5699:-451.204,-421.174,-519.441,-460.536,-523.053,-562.415,0,-62.5165,-101.877,-58.228 0|0:311:61,15,97,134:61:2395:15,97,134:600,3610,5350:-517.621,-486.558,-679.013,-240.536,-388.079,-408.304,-98.4722,-246.021,0,-255.11 0|0:287:109,9,78,91:109:4253:9,78,91:360,2927,3540:-255.704,-258.86,-605.728,-48.7844,-368.704,-374.879,0,-319.924,-109.849,-322.186 dDocent_Contig_2990 43 . G C 1961.14 . AB=0.25;ABP=44.2683;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1X3M2X;DP=197;DPB=197;DPRA=2.23529;EPP=44.2683;EPPR=224.582;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.315789;PAIREDR=0.679245;PAO=0;PQA=0;PQR=0;PRO=0;QA=753;QR=4106;RO=106;RPL=0;RPP=44.2683;RPPR=233.186;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=105;SRP=224.582;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:32:17,0,15:17:647:0,15:0,589:-43.7086,-48.8261,-101.88,0,-53.4404,-48.925 0|0:36:22,0,14:22:858:0,14:0,550:-39.0037,-45.6264,-116.144,0,-70.9088,-66.6943 0|0:17:16,0,1:16:630:0,1:0,33:0,-4.81648,-56.7038,-1.81837,-54.0393,-53.7383 0|0:36:20,0,16:20:773:0,16:0,628:-46.0139,-52.0345,-115.514,0,-63.8694,-59.0529 0|1:32:16,8,7:16:627:8,7:319,278:-21.4548,0,-49.1463,-3.3868,-28.6676,-52.8335 0|0:44:15,11,18:15:571:11,18:434,724:-55.1545,-23.9657,-67.4765,0,-11.1109,-41.4053 dDocent_Contig_2991 100 . T A 995.118 . AB=0.5;ABP=3.0103;AC=5;AF=0.416667;AN=12;AO=36;CIGAR=1X;DP=77;DPB=77;DPRA=4.93333;EPP=81.1833;EPPR=92.0407;GTI=0;LEN=1;MEANALT=1;MQM=46;MQMR=14.3902;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.682927;PAO=0;PQA=0;PQR=0;PRO=0;QA=1392;QR=1555;RO=41;RPL=0;RPP=81.1833;RPPR=92.0407;RPR=36;RUN=1;SAF=0;SAP=81.1833;SAR=36;SRF=0;SRP=92.0407;SRR=41;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:7,5:7:254:5:202:-14.4801,0,-3.83393 1/1:19:3,16:3:104:16:612:-50.1396,-1.61603,0 0/1:9:7,2:7:266:2:82:-4.85402,0,-5.09997 0/0:17:16,1:16:638:1:41:0,-1.13683,-12.9221 0/0:3:3,0:3:109:0:0:0,-0.90309,-2.42417 0/1:17:5,12:5:184:12:455:-35.2583,0,-5.12159 dDocent_Contig_2992 98 . N T 69.0896 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=2;CIGAR=3X;DP=3;DPB=25.3333;DPRA=2;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=14;PQA=446;PQR=0;PRO=0;QA=70;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:70:-6.30555,-0.60206,0 1|1:1:0,0:0:0:0:0:0,0,0 .:.:.:.:.:.:.:. dDocent_Contig_2994 98 . N T 1336.92 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=59;CIGAR=1X;DP=61;DPB=61;DPRA=0;EPP=131.127;EPPR=0;GTI=0;LEN=1;MEANALT=1.33333;MQM=35.6271;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.186441;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1942;QR=0;RO=0;RPL=59;RPP=131.127;RPPR=0;RPR=0;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:16:0,16:0:0:16:537:-35.9042,-4.81648,0 1/1:9:0,9:0:0:9:284:-17.009,-2.70927,0 1/1:7:0,6:0:0:6:199:-12.0807,-1.80618,0 1/1:12:0,11:0:0:11:361:-30.8721,-3.31133,0 1/1:11:0,11:0:0:11:370:-26.1699,-3.31133,0 1/1:6:0,6:0:0:6:191:-10.878,-1.80618,0 dDocent_Contig_2995 38 . T A 523.851 . AB=0.211864;ABP=88.1026;AC=1;AF=0.0833333;AN=12;AO=44;CIGAR=1X;DP=845;DPB=845;DPRA=1.0803;EPP=98.5551;EPPR=1742.36;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.2846;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.947566;PAO=0;PQA=0;PQR=0;PRO=0;QA=1701;QR=29773;RO=801;RPL=0;RPP=98.5551;RPPR=1742.36;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=801;SRP=1742.36;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:118:93,25:93:3491:25:987:-53.6069,0,-277.115 0/0:165:153,12:153:5759:12:477:0,-6.38945,-472.033 0/0:133:132,1:132:4908:1:35:0,-36.5384,-438.225 0/0:147:142,5:142:5295:5:193:0,-26.5139,-455.133 0/0:150:149,1:149:5476:1:9:0,-44.2545,-480.156 0/0:132:132,0:132:4844:0:0:0,-39.736,-435.994 dDocent_Contig_2996 37 . T C 19353.8 . AB=0.868195;ABP=413.966;AC=9;AF=0.75;AN=12;AO=584;CIGAR=1X;DP=647;DPB=647;DPRA=0;EPP=1271.15;EPPR=139.813;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.989726;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=23359;QR=2356;RO=63;RPL=0;RPP=1271.15;RPPR=139.813;RPR=584;RUN=1;SAF=584;SAP=1271.15;SAR=0;SRF=63;SRP=139.813;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:91:8,83:8:298:83:3301:-269.966,-0.222701,0 1/1:111:8,103:8:299:103:4149:-346.104,-6.15207,0 0/1:87:21,66:21:773:66:2640:-211.531,0,-43.6872 0/1:125:13,112:13:490:112:4460:-363.707,0,-6.8104 1/1:96:1,95:1:41:95:3824:-340.059,-24.8043,0 0/1:137:12,125:12:455:125:4985:-407.283,0,-0.0536867 dDocent_Contig_2997 98 . N T 179.91 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=10;CIGAR=1X;DP=10;DPB=10;DPRA=0;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=186;QR=0;RO=0;RPL=10;RPP=24.725;RPPR=0;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:22:-2.08999,-0.60206,0 1/1:1:0,1:0:0:1:10:-0.999996,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:40:-3.79967,-0.60206,0 1/1:5:0,5:0:0:5:114:-10.4866,-1.50515,0 ./.:.:.:.:.:.:.:. dDocent_Contig_2998 1 . N A 832.016 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=24;CIGAR=1X1M10I2M;DP=24;DPB=84;DPRA=0;EPP=55.1256;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=54.5417;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=909;QR=0;RO=0;RPL=0;RPP=55.1256;RPPR=0;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:4:0,4:0:0:4:151:-13.9241,-1.20412,0 1|1:15:0,15:0:0:15:567:-51.2702,-4.51545,0 1|1:5:0,5:0:0:5:191:-17.5301,-1.50515,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_2999 32 . G T 824.212 . AB=0.21466;ABP=138.085;AC=4;AF=0.333333;AN=12;AO=47;CIGAR=2X1M1X;DP=307;DPB=307;DPRA=0;EPP=105.07;EPPR=567.593;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.87234;PAIREDR=0.942308;PAO=0;PQA=0;PQR=0;PRO=0;QA=1848;QR=9850;RO=260;RPL=0;RPP=105.07;RPPR=567.593;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=260;SRP=567.593;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:56:49,7:49:1880:7:278:-8.53255,0,-152.582 0|0:60:57,3:57:2176:3:109:0,-7.89486,-185.893 0|1:38:27,11:27:1038:11:435:-28.0658,0,-82.2867 0|0:56:53,3:53:1961:3:120:0,-5.66978,-165.536 0|1:42:30,12:30:1126:12:476:-30.5483,0,-88.9862 0|1:55:44,11:44:1669:11:430:-22.4965,0,-133.906 dDocent_Contig_3000 9 . A T 35954.4 . AB=0.77861;ABP=633.413;AC=8;AF=0.666667;AN=12;AO=1134;CIGAR=1X;DP=1351;DPB=1351;DPRA=0;EPP=2465.46;EPPR=472.048;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=43554;QR=8223;RO=216;RPL=0;RPP=2465.46;RPPR=472.048;RPR=1134;RUN=1;SAF=1134;SAP=2465.46;SAR=0;SRF=216;SRP=472.048;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:173:36,137:36:1386:137:5273:-422.484,0,-72.9447 0/1:202:70,132:70:2670:132:5100:-398.195,0,-179.682 0/1:285:65,220:65:2445:220:8462:-675.542,0,-134.459 0/1:275:35,239:35:1340:239:9147:-740.072,0,-38.0155 1/1:261:0,261:0:0:261:9994:-899.114,-78.5688,0 1/1:155:10,145:10:382:145:5578:-467.255,-11.9247,0 dDocent_Contig_3001 8 . T A 58.708 . AB=0.0921053;ABP=552.164;AC=1;AF=0.0833333;AN=12;AO=42;CIGAR=1X;DP=2244;DPB=2244;DPRA=1.36376;EPP=94.2121;EPPR=4784.59;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9991;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.998638;PAO=0;PQA=0;PQR=0;PRO=0;QA=1596;QR=83376;RO=2202;RPL=0;RPP=94.2121;RPPR=4784.59;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=2202;SRP=4784.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:406:402,4:402:15254:4:156:0,-107.801,-1357.76 0/0:475:474,1:474:17936:1:32:0,-139.79,-1610.19 0/1:380:345,35:345:12977:35:1350:-7.39367,0,-1053.04 0/0:472:471,1:471:17828:1:39:0,-138.19,-1599.76 0/0:224:223,1:223:8489:1:19:0,-65.5308,-761.895 0/0:287:287,0:287:10892:0:0:0,-86.3956,-979.896 dDocent_Contig_3002 18 . C A 379.003 . AB=0.170543;ABP=124.63;AC=1;AF=0.0833333;AN=12;AO=50;CIGAR=1X;DP=624;DPB=624;DPRA=0;EPP=111.584;EPPR=1249.44;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.78;PAIREDR=0.87108;PAO=0;PQA=0;PQR=0;PRO=0;QA=1914;QR=22811;RO=574;RPL=0;RPP=111.584;RPPR=1249.44;RPR=50;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=574;SRP=1249.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:89:86,3:86:3425:3:110:0,-16.5316,-298.042 0/0:102:98,4:98:3896:4:131:0,-18.5998,-338.548 0/0:100:94,6:94:3766:6:223:0,-9.68001,-318.533 0/0:104:96,8:96:3822:8:313:0,-2.7746,-315.469 0/0:100:93,7:93:3680:7:271:0,-5.34902,-306.483 0/1:129:107,22:107:4222:22:866:-39.4232,0,-341.133 dDocent_Contig_3003 26 . A C 70082.7 . AB=0.0501587;ABP=5539.61;AC=0;AF=0;AN=12;AO=158;CIGAR=3X1M3X3M;DP=3807;DPB=3806.6;DPRA=0;EPP=346.103;EPPR=341.76;GTI=0;LEN=1;MEANALT=20;MQM=57.538;MQMR=60;NS=6;NUMALT=6;ODDS=0;PAIRED=0.943038;PAIREDR=0.99359;PAO=0;PQA=0;PQR=0;PRO=0;QA=6089;QR=6100;RO=156;RPL=0;RPP=346.103;RPPR=341.76;RPR=158;RUN=1;SAF=158;SAP=346.103;SAR=0;SRF=156;SRP=341.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:562:33,63,15,31,46,292,31:33:1289:63,15,31,46,292,31:2498,590,1230,1795,11404,1183:-1025.89,-830.212,-917.213,-987.295,-887.646,-1088.75,-934.932,-835.283,-992.365,-1031.57,-888.817,-789.167,-946.25,-893.887,-980.935,-99.6499,0,-157.083,-104.72,-58.6054,-117.715,-939.344,-839.695,-996.777,-944.414,-898.299,-109.133,-1035.98 0|0:786:41,105,17,60,69,400,44:41:1614:105,17,60,69,400,44:4157,661,2355,2669,15745,1633:-1490.82,-1161.03,-1262.19,-1449.12,-1239.76,-1576.77,-1310.02,-1100.66,-1388.75,-1424.73,-1284.76,-1075.4,-1363.49,-1224.4,-1396.76,-209.363,0,-288.091,-148.996,-123.738,-221.724,-1371.2,-1161.84,-1449.93,-1310.84,-1285.58,-210.178,-1490.73 0|0:350:22,25,5,24,35,179,27:22:862:25,5,24,35,179,27:998,199,838,1372,7037,1057:-612.873,-537.301,-600.654,-603.109,-591.793,-672.483,-552.876,-541.56,-607.368,-616.53,-506.675,-495.36,-561.168,-510.935,-567.018,-41.9418,-30.6252,-96.4353,-46.2052,0,-58.9374,-532.874,-521.558,-587.367,-537.134,-490.933,-26.1995,-595.625 0|0:717:42,92,15,51,53,349,47:42:1647:92,15,51,53,349,47:3649,568,2020,2060,13700,1854:-1278.17,-990.449,-1098.2,-1244.26,-1079.34,-1375.19,-1125.38,-960.452,-1214.27,-1245.47,-1121.82,-956.898,-1210.71,-1091.83,-1241.31,-164.924,0,-253.814,-134.928,-131.374,-195.309,-1138.28,-973.358,-1227.17,-1108.29,-1104.73,-147.834,-1259.58 0|0:657:5,64,46,45,46,347,0:5:186:64,46,45,46,347,0:2523,1774,1764,1784,13609,0:-1309.55,-1103.49,-1099.44,-1166.26,-973.909,-1167.63,-1166.74,-974.394,-1037.16,-1168.42,-1164.5,-972.154,-1034.92,-1035.41,-1165.88,-192.349,0,-62.7716,-63.2564,-61.016,-103.113,-1311.06,-1118.71,-1181.48,-1181.96,-1179.72,-207.571,-1326.28 0|0:735:13,100,56,50,80,317,9:13:502:100,56,50,80,317,9:3953,2169,1917,3103,12438,362:-1302.18,-980.8,-991.923,-1129.42,-845.345,-1153.78,-1150.09,-866.017,-1014.63,-1176.26,-1053.09,-769.02,-917.635,-938.306,-1070.23,-284.072,0,-148.617,-169.288,-72.291,-229.871,-1276.27,-992.197,-1140.81,-1161.48,-1064.49,-295.469,-1314.78 dDocent_Contig_3004 27 . C T 381.387 . AB=0.0946626;ABP=1420.1;AC=1;AF=0.0833333;AN=12;AO=205;CIGAR=1X;DP=4719;DPB=4719;DPRA=0;EPP=448.162;EPPR=9800.69;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.999557;PAO=0;PQA=0;PQR=0;PRO=0;QA=8191;QR=181161;RO=4512;RPL=0;RPP=448.162;RPPR=9800.69;RPR=205;RUN=1;SAF=205;SAP=448.162;SAR=0;SRF=4512;SRP=9800.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:674:667,5:667:26807:5:202:0,-184.067,-2391.62 0/0:789:783,6:783:31424:6:244:0,-215.174,-2802.86 0/0:469:464,5:464:18690:5:204:0,-122.439,-1661.72 0/0:749:725,24:725:29119:24:973:0,-137.604,-2530.1 0/1:993:899,94:899:36091:94:3762:-39.6616,0,-2945.8 0/0:1045:974,71:974:39030:71:2806:0,-61.9448,-3256.33 dDocent_Contig_3005 9 . T C 1635.37 . AB=0.265683;ABP=132.249;AC=3;AF=0.25;AN=12;AO=93;CIGAR=1X;DP=669;DPB=669;DPRA=0;EPP=204.957;EPPR=1249.44;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.994774;PAO=0;PQA=0;PQR=0;PRO=0;QA=3590;QR=21912;RO=574;RPL=0;RPP=204.957;RPPR=1249.44;RPR=93;RUN=1;SAF=93;SAP=204.957;SAR=0;SRF=574;SRP=1249.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:103:98,5:98:3724:5:195:0,-13.0819,-317.353 0/1:106:76,30:76:2909:30:1157:-72.5189,0,-230.075 0/1:49:31,18:31:1170:18:689:-47.5931,0,-90.8473 0/1:116:92,24:92:3541:24:925:-48.6473,0,-283.891 0/0:185:168,15:168:6443:15:585:0,-2.36149,-526.808 0/0:110:109,1:109:4125:1:39:0,-29.2167,-367.44 dDocent_Contig_3006 49 . A T 58.1766 . AB=0.103093;ABP=135.739;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=2X;DP=392;DPB=392;DPRA=1.64407;EPP=24.725;EPPR=815.232;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.994764;PAO=0;PQA=0;PQR=0;PRO=0;QA=402;QR=14805;RO=382;RPL=10;RPP=24.725;RPPR=815.232;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=382;SRP=832.513;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:53:53,0:53:2093:0:0:0,-15.9546,-188.568 0|0:68:68,0:68:2637:0:0:0,-20.47,-237.482 0|1:97:87,10:87:3359:10:402:-7.34054,0,-273.185 0|0:68:68,0:68:2638:0:0:0,-20.47,-237.585 0|0:38:38,0:38:1455:0:0:0,-11.4391,-131.206 0|0:68:68,0:68:2623:0:0:0,-20.47,-236.232 dDocent_Contig_3007 10 . G A 5372.69 . AB=0.451691;ABP=11.4025;AC=6;AF=0.5;AN=12;AO=187;CIGAR=1X;DP=414;DPB=414;DPRA=0;EPP=409.076;EPPR=495.935;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.86631;PAIREDR=0.9163;PAO=0;PQA=0;PQR=0;PRO=0;QA=7461;QR=9016;RO=227;RPL=0;RPP=409.076;RPPR=495.935;RPR=187;RUN=1;SAF=187;SAP=409.076;SAR=0;SRF=227;SRP=495.935;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:63:36,27:36:1439:27:1079:-78.4373,0,-110.797 0/1:93:62,31:62:2455:31:1236:-83.5171,0,-193.101 0/1:37:26,11:26:1017:11:448:-29.5379,0,-80.682 0/1:68:33,35:33:1322:35:1396:-105.427,0,-98.7711 0/1:56:31,25:31:1233:25:1004:-73.7929,0,-94.3808 0/1:97:39,58:39:1550:58:2298:-177.779,0,-110.54 dDocent_Contig_3008 96 . A G 42.7389 . AB=0.135593;ABP=71.062;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=241;DPB=241;DPRA=0.97541;EPP=24.725;EPPR=504.62;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.6;PAIREDR=0.943723;PAO=0;PQA=0;PQR=0;PRO=0;QA=342;QR=7992;RO=231;RPL=10;RPP=24.725;RPPR=504.62;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=231;SRP=504.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:28,4:28:963:4:134:-2.75825,0,-77.3456 0/0:60:58,2:58:2015:2:69:0,-11.5091,-175.071 0/1:27:23,4:23:816:4:139:-4.72488,0,-65.6339 0/0:36:36,0:36:1239:0:0:0,-10.8371,-111.807 0/0:41:41,0:41:1431:0:0:0,-12.3422,-129.087 0/0:45:45,0:45:1528:0:0:0,-13.5463,-137.802 dDocent_Contig_3009 7 . T C 54182.2 . AB=0.796976;ABP=357.692;AC=10;AF=0.833333;AN=12;AO=1661;CIGAR=1X;DP=1807;DPB=1807;DPRA=0;EPP=3609.83;EPPR=315.702;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.996388;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=63719;QR=5487;RO=144;RPL=0;RPP=3609.83;RPPR=315.702;RPR=1661;RUN=1;SAF=1661;SAP=3609.83;SAR=0;SRF=144;SRP=315.702;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:194:10,184:10:388:184:7080:-601.782,-23.1219,0 1/1:259:16,243:16:586:243:9307:-784.264,-24.8997,0 0/1:189:18,171:18:691:171:6486:-526.753,0,-5.62874 0/1:274:76,198:76:2906:198:7609:-602.15,0,-179.224 1/1:449:6,443:6:234:443:16989:-1506.7,-113.731,0 1/1:442:18,422:18:682:422:16248:-1399.79,-71.0258,0 dDocent_Contig_3010 54 . G T 63.8632 . AB=0.10084;ABP=167.695;AC=1;AF=0.0833333;AN=12;AO=21;CIGAR=1X;DP=778;DPB=778;DPRA=0.823956;EPP=48.6112;EPPR=1627.28;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.989362;PAO=0;PQA=0;PQR=0;PRO=0;QA=802;QR=29479;RO=752;RPL=21;RPP=48.6112;RPPR=1635.96;RPR=0;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=751;SRP=1627.28;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:111:107,0:107:4209:0:0:0,-32.2102,-378.416 0/0:138:137,0:137:5385:0:0:0,-41.2411,-484.148 0/0:188:188,0:188:7425:0:0:0,-56.5936,-667.911 0/0:114:114,0:114:4429:0:0:0,-34.3174,-398.59 0/1:119:107,12:107:4163:12:482:-7.9092,0,-338.848 0/0:108:99,9:99:3868:9:320:0,-3.3839,-319.001 dDocent_Contig_3011 9 . G T 71955.6 . AB=0.729258;ABP=1152.99;AC=7;AF=0.583333;AN=12;AO=2351;CIGAR=1X2M;DP=3099;DPB=3099;DPRA=0;EPP=5108.14;EPPR=1418.81;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.22045e-16;PAIRED=0.999149;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=90145;QR=25561;RO=652;RPL=0;RPP=5108.14;RPPR=1418.81;RPR=2351;RUN=1;SAF=2351;SAP=5108.14;SAR=0;SRF=652;SRP=1418.81;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:453:147,18,288:147:5776:18,288:703,11039:-861.753,-848.216,-1317.88,0,-417.292,-388.383 0|1:482:148,35,298:148:5788:35,298:1386,11446:-895.033,-825.507,-1290.84,0,-361.785,-386.156 0|1:345:117,13,215:117:4579:13,215:517,8248:-641.765,-634.417,-1007,0,-333.916,-311.763 0|1:473:120,9,344:120:4699:9,344:354,13156:-1043.4,-1050.4,-1434.07,0,-357.255,-282.82 0|1:766:73,0,692:73:2867:0,692:0,26578:-2159.77,-2181.75,-2417.55,0,-235.809,-27.4962 1|1:580:47,18,514:47:1852:18,514:716,19678:-1603.06,-1558.25,-1705.2,-2.35994,-95.7731,0 dDocent_Contig_3012 41 . A T 3881.82 . AB=0.185083;ABP=938.495;AC=6;AF=0.5;AN=12;AO=201;CIGAR=1X;DP=1086;DPB=1086;DPRA=0;EPP=439.476;EPPR=1924.76;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.328358;PAIREDR=0.932203;PAO=0;PQA=0;PQR=0;PRO=0;QA=8053;QR=35086;RO=885;RPL=201;RPP=439.476;RPPR=1924.76;RPR=0;RUN=1;SAF=201;SAP=439.476;SAR=0;SRF=885;SRP=1924.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:99:68,31:68:2704:31:1239:-81.9785,0,-213.679 0/1:201:165,36:165:6526:36:1453:-70.5058,0,-526.574 0/1:160:116,44:116:4590:44:1769:-111.257,0,-364.867 0/1:175:133,42:133:5283:42:1682:-98.9233,0,-422.651 0/1:258:235,23:235:9278:23:920:-5.43989,0,-756.822 0/1:193:168,25:168:6705:25:990:-31.299,0,-545.071 dDocent_Contig_3013 35 . G A 32.5812 . AB=0.102564;ABP=110.025;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=411;DPB=411;DPRA=1.08629;EPP=26.8965;EPPR=871.599;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.8975;PAO=0;PQA=0;PQR=0;PRO=0;QA=431;QR=15724;RO=400;RPL=0;RPP=26.8965;RPPR=871.599;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=400;SRP=871.599;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:73:71,2:71:2798:2:81:0,-14.2895,-244.264 0/0:63:62,1:62:2420:1:40:0,-14.9692,-213.966 0/0:39:39,0:39:1548:0:0:0,-11.7402,-139.559 0/1:78:70,8:70:2772:8:310:-4.78076,0,-226.122 0/0:78:78,0:78:3106:0:0:0,-23.4803,-279.626 0/0:80:80,0:80:3080:0:0:0,-24.0824,-277.291 dDocent_Contig_3014 20 . A G 212.396 . AB=0.130435;ABP=194.005;AC=2;AF=0.166667;AN=12;AO=24;CIGAR=1X;DP=382;DPB=382;DPRA=1.24706;EPP=55.1256;EPPR=780.397;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997207;PAO=0;PQA=0;PQR=0;PRO=0;QA=890;QR=13623;RO=358;RPL=0;RPP=55.1256;RPPR=780.397;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=358;SRP=780.397;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:43:43,0:43:1638:0:0:0,-12.9443,-147.684 0/0:69:69,0:69:2615:0:0:0,-20.7711,-235.541 0/1:120:103,17:103:3911:17:650:-22.7096,0,-315.97 0/1:41:37,4:37:1388:4:154:-1.89082,0,-112.855 0/0:58:58,0:58:2239:0:0:0,-17.4597,-201.724 0/0:51:48,3:48:1832:3:86:0,-7.33096,-157.104 dDocent_Contig_3015 90 . C G 241.041 . AB=0.265306;ABP=26.4533;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=386;DPB=386;DPRA=0.615063;EPP=42.0968;EPPR=799.941;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.948229;PAO=0;PQA=0;PQR=0;PRO=0;QA=620;QR=12684;RO=367;RPL=18;RPP=42.0968;RPPR=799.941;RPR=0;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=367;SRP=799.941;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:45:41,4:41:1428:4:140:0,-0.601421,-115.87 0/0:53:52,1:52:1757:1:35:0,-12.456,-154.913 0/1:49:36,13:36:1248:13:445:-25.6268,0,-97.874 0/0:44:44,0:44:1536:0:0:0,-13.2453,-138.535 0/0:76:75,0:75:2578:0:0:0,-22.5772,-231.925 0/0:119:119,0:119:4137:0:0:0,-35.8226,-372.537 dDocent_Contig_3016 11 . T A 431.963 . AB=0.154286;ABP=184.682;AC=1;AF=0.0833333;AN=12;AO=48;CIGAR=1X;DP=990;DPB=990;DPRA=0.759542;EPP=107.241;EPPR=2048.54;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.991507;PAO=0;PQA=0;PQR=0;PRO=0;QA=1918;QR=37657;RO=942;RPL=0;RPP=107.241;RPPR=2048.54;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=942;SRP=2048.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:136:134,2:134:5352:2:82:0,-33.1604,-473.736 0/1:175:148,27:148:5912:27:1079:-44.7192,0,-479.173 0/0:101:94,7:94:3752:7:286:0,-4.28921,-311.571 0/0:185:173,12:173:6910:12:471:0,-12.9538,-578.836 0/0:201:201,0:201:8042:0:0:0,-60.507,-723.317 0/0:192:192,0:192:7689:0:0:0,-57.7978,-691.588 dDocent_Contig_3017 32 . T C 7365.55 . AB=0.52795;ABP=6.28774;AC=6;AF=0.5;AN=12;AO=255;CIGAR=1X;DP=483;DPB=483;DPRA=0;EPP=556.736;EPPR=498.106;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9909;QR=9061;RO=228;RPL=0;RPP=556.736;RPPR=498.106;RPR=255;RUN=1;SAF=255;SAP=556.736;SAR=0;SRF=228;SRP=498.106;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:63:23,40:23:913:40:1564:-122.032,0,-63.5102 0/1:97:44,53:44:1740:53:2079:-158.104,0,-127.625 0/1:143:68,75:68:2706:75:2861:-214.536,0,-200.613 0/1:101:46,55:46:1823:55:2152:-163.459,0,-133.877 0/1:36:23,13:23:916:13:518:-36.1262,0,-71.9099 0/1:43:24,19:24:963:19:735:-53.5198,0,-74.0249 dDocent_Contig_3018 1 . N G 75.9287 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=80;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:80:-7.59179,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_3019 16 . G A 1109.71 . AB=0.247423;ABP=110.509;AC=2;AF=0.166667;AN=12;AO=48;CIGAR=1X;DP=598;DPB=598;DPRA=0.960396;EPP=107.241;EPPR=1197.32;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996364;PAO=0;PQA=0;PQR=0;PRO=0;QA=1911;QR=21777;RO=550;RPL=0;RPP=107.241;RPPR=1197.32;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=550;SRP=1197.32;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:55:55,0:55:2187:0:0:0,-16.5566,-197.007 0/0:157:157,0:157:6218:0:0:0,-47.2617,-559.399 0/0:92:92,0:92:3636:0:0:0,-27.6948,-327.261 0/0:100:100,0:100:3949:0:0:0,-30.103,-355.401 0/1:128:106,22:106:4189:22:861:-39.2706,0,-338.449 0/1:66:40,26:40:1598:26:1050:-74.9222,0,-124.186 dDocent_Contig_3020 98 . N G 279.695 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=9;CIGAR=2X;DP=10;DPB=77;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=73;PQA=2081;PQR=0;PRO=0;QA=304;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:3:0,3:0:0:3:104:-9.36485,-0.90309,0 1|1:4:0,4:0:0:4:133:-11.9684,-1.20412,0 1|1:3:0,2:0:0:2:67:-6.03368,-0.60206,0 .:.:.:.:.:.:.:. dDocent_Contig_3022 24 . G T 91627.2 . AB=0.783398;ABP=1078.71;AC=9;AF=0.75;AN=12;AO=2735;CIGAR=5M1X;DP=3176;DPB=3161.5;DPRA=0;EPP=5941.99;EPPR=691.367;GTI=0;LEN=1;MEANALT=4.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=108953;QR=12502;RO=317;RPL=0;RPP=5941.99;RPPR=691.367;RPR=2735;RUN=1;SAF=2735;SAP=5941.99;SAR=0;SRF=317;SRP=691.367;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:494:8,14,470:8:318:14,470:563,18672:-1649.99,-1606,-1627.97,-115.297,-95.0654,0 1|1:605:28,16,557:28:1098:16,557:634,22162:-1893.6,-1849.84,-1935.32,-77.3766,-115.489,0 1|1:535:16,5,500:16:624:5,500:202,20005:-1742.24,-1730.4,-1780.19,-99.2259,-133.859,0 0|1:582:91,41,448:91:3565:41,448:1600,17810:-1438.79,-1334.67,-1615.46,0,-161.617,-158.267 0|1:495:116,11,354:116:4585:11,354:427,14082:-1124.43,-1124.27,-1498.27,0,-342.233,-270.749 0|1:465:58,0,406:58:2312:0,406:0,16222:-1318.89,-1336.35,-1526.75,0,-190.69,-68.4717 dDocent_Contig_3023 98 . N C 328.535 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=13;CIGAR=1X;DP=13;DPB=13;DPRA=0;EPP=31.2394;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=58.0769;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0.923077;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=343;QR=0;RO=0;RPL=13;RPP=31.2394;RPPR=0;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:75:-6.99121,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:43:-4.08434,-0.60206,0 1/1:2:0,2:0:0:2:49:-4.65433,-0.60206,0 1/1:3:0,3:0:0:3:81:-7.55929,-0.90309,0 1/1:3:0,3:0:0:3:95:-8.86458,-0.90309,0 dDocent_Contig_3024 59 . A T 21156.1 . AB=0.0394265;ABP=517.073;AC=0;AF=0;AN=12;AO=12;CIGAR=1X1M1X;DP=897;DPB=897;DPRA=0;EPP=9.52472;EPPR=428.619;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.25;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=462;QR=7654;RO=196;RPL=12;RPP=29.068;RPPR=428.619;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=9;SRF=196;SRP=428.619;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:103:50,10,43:50:1949:10,43:391,1623:-117.928,-100.838,-258.02,0,-128.046,-147.24 0|0:107:55,0,52:55:2166:0,52:0,1967:-145.027,-161.583,-339.78,0,-178.582,-162.928 0|0:114:16,0,98:16:618:0,98:0,3747:-300.761,-305.577,-356.33,0,-51.137,-21.6361 0|0:203:34,0,169:34:1299:0,169:0,6504:-517.578,-527.813,-634.376,0,-106.945,-56.0706 0|0:194:0,1,192:0:0:1,192:31,7243:-646.943,-644.455,-644.154,-57.7978,-55.2793,0 0|0:176:41,1,132:41:1622:1,132:40,5000:-396.595,-405.642,-538.835,0,-130.289,-93.8489 dDocent_Contig_3025 23 . G A 40486.6 . AB=0.0480094;ABP=1518.42;AC=0;AF=0;AN=12;AO=41;CIGAR=3X;DP=1822;DPB=1822;DPRA=0;EPP=92.0407;EPPR=984.516;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1567;QR=17280;RO=452;RPL=0;RPP=92.0407;RPPR=984.516;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=452;SRP=984.516;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:162:39,109,13:39:1487:109,13:4126,491:-326.447,0,-89.1877,-297.948,-81.7598,-416.018 0|0:240:95,122,22:95:3652:122,22:4726,841:-359.597,0,-263.076,-319.205,-230.811,-612.376 0|0:151:46,105,0:46:1754:105,0:3992,0:-313.836,0,-112.657,-327.683,-144.265,-471.567 0|0:295:57,238,0:57:2175:238,0:9246,0:-742.863,0,-107.167,-760.022,-178.812,-938.451 0|0:522:104,416,0:104:3984:416,0:16061,0:-1287.72,0,-201.966,-1319.02,-327.194,-1645.97 0|0:452:111,335,6:111:4228:335,6:12943,235:-1029.42,0,-245.932,-1043.52,-327.454,-1388.5 dDocent_Contig_3026 8 . T C 92.9667 . AB=0.113043;ABP=152.578;AC=1;AF=0.0833333;AN=12;AO=26;CIGAR=1X;DP=664;DPB=664;DPRA=1.33425;EPP=59.4686;EPPR=1388.41;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996865;PAO=0;PQA=0;PQR=0;PRO=0;QA=1002;QR=24494;RO=638;RPL=0;RPP=59.4686;RPPR=1388.41;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=638;SRP=1388.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:52:52,0:52:2002:0:0:0,-15.6536,-180.416 0/0:140:129,11:129:4963:11:424:0,-3.63016,-408.173 0/0:75:74,1:74:2850:1:39:0,-18.6807,-252.777 0/1:115:102,13:102:3897:13:501:-10.8195,0,-316.214 0/0:129:129,0:129:4923:0:0:0,-38.8329,-443.098 0/0:153:152,1:152:5859:1:38:0,-42.2603,-523.459 dDocent_Contig_3027 12 . A T 834.315 . AB=0.133333;ABP=213.209;AC=5;AF=0.416667;AN=12;AO=26;CIGAR=1X1M;DP=222;DPB=222;DPRA=0;EPP=59.4686;EPPR=346.103;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.307692;PAIREDR=0.607595;PAO=0;PQA=0;PQR=0;PRO=0;QA=1055;QR=6198;RO=158;RPL=0;RPP=59.4686;RPPR=346.103;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=158;SRP=346.103;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:39:24,8,7:24:955:8,7:305,285:-17.7806,0,-76.2148,-1.4828,-55.1104,-78.0181 0|1:58:40,13,5:40:1577:13,5:510,204:-29.8858,0,-125.814,-25.0913,-112.895,-153.327 0|1:26:19,3,4:19:737:3,4:123,163:-7.72634,-3.29261,-62.9159,0,-50.3683,-59.3194 0|1:32:17,11,4:17:650:11,4:421,164:-29.4008,0,-49.9982,-20.9748,-39.7679,-73.1022 0|1:25:18,3,4:18:715:3,4:117,161:-7.85729,-3.66396,-61.6184,0,-49.2518,-57.6638 0|0:42:40,0,2:40:1564:0,2:0,78:0,-12.0412,-140.623,-5.24048,-134.212,-133.61 dDocent_Contig_3028 85 . G A 299.454 . AB=0.196078;ABP=84.845;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=375;DPB=375;DPRA=0.747253;EPP=46.4397;EPPR=769.54;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.988669;PAO=0;PQA=0;PQR=0;PRO=0;QA=698;QR=12074;RO=353;RPL=20;RPP=46.4397;RPPR=769.54;RPR=0;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=353;SRP=769.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:60:53,7:53:1828:7:245:-4.32943,0,-146.742 0/1:42:27,13:27:925:13:453:-28.8375,0,-71.3073 0/0:16:16,0:16:540:0:0:0,-4.81648,-48.9206 0/0:45:45,0:45:1545:0:0:0,-13.5463,-139.343 0/0:119:119,0:119:4090:0:0:0,-35.8226,-368.311 0/0:93:93,0:93:3146:0:0:0,-27.9958,-283.377 dDocent_Contig_3029 107 . N A 205.789 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=209;QR=0;RO=0;RPL=0;RPP=18.2106;RPPR=0;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:63:-5.98364,-0.60206,0 1/1:2:0,2:0:0:2:52:-4.93894,-0.60206,0 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:25:-2.49986,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_3030 75 . G T 84.2962 . AB=0.105556;ABP=246.263;AC=1;AF=0.0833333;AN=12;AO=46;CIGAR=1X;DP=1806;DPB=1806;DPRA=0.627027;EPP=102.898;EPPR=3818.29;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99317;PAO=0;PQA=0;PQR=0;PRO=0;QA=1698;QR=62896;RO=1757;RPL=46;RPP=102.898;RPPR=3818.29;RPR=0;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=1757;SRP=3818.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:211:209,0:209:7512:0:0:0,-62.9153,-675.719 0/0:243:238,4:238:8564:4:142:0,-60.087,-757.579 0/1:180:161,19:161:5982:19:709:-9.9525,0,-484.17 0/0:273:250,23:250:8883:23:847:0,-5.64249,-722.875 0/0:422:422,0:422:15019:0:0:0,-127.035,-1351.36 0/0:477:477,0:477:16936:0:0:0,-143.591,-1523.81 dDocent_Contig_3031 12 . G A 15107.9 . AB=0.258867;ABP=1241.88;AC=6;AF=0.5;AN=12;AO=635;CIGAR=1X;DP=2453;DPB=2453;DPRA=0;EPP=1381.9;EPPR=3950.75;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.99615;PAO=0;PQA=0;PQR=0;PRO=0;QA=25118;QR=71571;RO=1818;RPL=0;RPP=1381.9;RPPR=3950.75;RPR=635;RUN=1;SAF=635;SAP=1381.9;SAR=0;SRF=1818;SRP=3950.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:291:178,113:178:6948:113:4465:-314.183,0,-537.433 0/1:428:289,139:289:11305:139:5509:-366.802,0,-887.884 0/1:383:308,75:308:12136:75:2992:-154.075,0,-976.137 0/1:369:260,109:260:10256:109:4309:-276.68,0,-811.323 0/1:531:443,88:443:17560:88:3456:-151.252,0,-1419.18 0/1:451:340,111:340:13366:111:4387:-259.017,0,-1066.23 dDocent_Contig_3032 12 . G A 373.839 . AB=0.125475;ABP=323.439;AC=1;AF=0.0833333;AN=12;AO=61;CIGAR=1X;DP=1412;DPB=1412;DPRA=0.742958;EPP=135.47;EPPR=2934.5;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.982963;PAO=0;PQA=0;PQR=0;PRO=0;QA=2388;QR=53173;RO=1350;RPL=0;RPP=135.47;RPPR=2934.5;RPR=61;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=1350;SRP=2934.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:187:175,12:175:6823:12:458:0,-14.7312,-572.236 0/1:263:230,33:230:9018:33:1309:-38.9067,0,-731.96 0/0:150:143,6:143:5647:6:227:0,-24.4673,-487.269 0/0:244:234,10:234:9231:10:394:0,-37.6348,-794.428 0/0:292:292,0:292:11594:0:0:0,-87.9008,-1042.66 0/0:276:276,0:276:10860:0:0:0,-83.0843,-976.733 dDocent_Contig_3033 49 . G A 114371 . AB=0.905429;ABP=818.24;AC=11;AF=0.916667;AN=12;AO=3297;CIGAR=1X;DP=3400;DPB=3400;DPRA=0;EPP=4829.28;EPPR=211.559;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.996967;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=130951;QR=3967;RO=100;RPL=295;RPP=4829.28;RPPR=211.559;RPR=3002;RUN=1;SAF=3297;SAP=7162.35;SAR=0;SRF=100;SRP=220.158;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:449:7,441:7:285:441:17604:-1556.94,-108.967,0 0/1:571:54,517:54:2155:517:20463:-1668.08,0,-22.2393 1/1:434:16,416:16:651:416:16495:-1424.36,-71.3227,0 1/1:515:21,494:21:810:494:19629:-1691.79,-81.8225,0 1/1:754:2,752:2:66:752:29810:-2674,-220.712,0 1/1:677:0,677:0:0:677:26950:-2423.12,-203.797,0 dDocent_Contig_3034 77 . C T 497.367 . AB=0.252525;ABP=55.674;AC=2;AF=0.166667;AN=12;AO=25;CIGAR=1X;DP=219;DPB=219;DPRA=1.65;EPP=57.2971;EPPR=424.276;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.84;PAIREDR=0.891753;PAO=0;PQA=0;PQR=0;PRO=0;QA=912;QR=6974;RO=194;RPL=25;RPP=57.2971;RPPR=424.276;RPR=0;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=194;SRP=424.276;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:603:0:0:0,-5.11751,-54.5979 0/0:46:46,0:46:1660:0:0:0,-13.8474,-149.684 0/0:31:31,0:31:1133:0:0:0,-9.33193,-102.279 0/0:26:26,0:26:938:0:0:0,-7.82678,-84.7356 0/1:60:42,18:42:1510:18:661:-41.7617,0,-118.126 0/1:39:32,7:32:1130:7:251:-11.1968,0,-90.261 dDocent_Contig_3035 13 . G T 20322.6 . AB=0.117845;ABP=379.757;AC=1;AF=0.0833333;AN=12;AO=35;CIGAR=1X1M1X;DP=695;DPB=695;DPRA=1.49246;EPP=79.0118;EPPR=144.156;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1389;QR=2575;RO=65;RPL=0;RPP=79.0118;RPPR=144.156;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=65;SRP=144.156;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:112:1,0,111:1:40:0,111:0,4448:-396.242,-396.543,-399.838,-29.7197,-33.4143,0 1|0:109:16,26,67:16:624:26,67:1034,2674:-249.243,-168.932,-212.387,-33.8521,0,-64.9636 0|0:188:34,9,144:34:1363:9,144:355,5771:-465.208,-446.238,-555.824,0,-83.0969,-68.9526 0|0:80:5,0,75:5:204:0,75:0,3005:-251.784,-253.289,-270.121,-5.33837,-22.5773,0 0|0:100:8,0,91:8:317:0,91:0,3595:-294.694,-297.102,-323.194,-1.30494,-27.3937,0 0|0:106:1,0,105:1:27:0,105:0,4234:-378.308,-378.609,-380.736,-29.2094,-31.6082,0 dDocent_Contig_3036 65 . T A 97.0614 . AB=0.155172;ABP=62.913;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=259;DPB=259;DPRA=1.44279;EPP=22.5536;EPPR=545.878;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.888889;PAIREDR=0.944;PAO=0;PQA=0;PQR=0;PRO=0;QA=315;QR=8603;RO=250;RPL=9;RPP=22.5536;RPPR=545.878;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=250;SRP=545.878;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:45:45,0:45:1541:0:0:0,-13.5463,-138.983 0/1:58:49,9:49:1665:9:315:-11.229,0,-132.673 0/0:50:50,0:50:1739:0:0:0,-15.0515,-156.798 0/0:39:39,0:39:1352:0:0:0,-11.7402,-121.98 0/0:33:33,0:33:1145:0:0:0,-9.93399,-103.356 0/0:34:34,0:34:1161:0:0:0,-10.235,-104.793 dDocent_Contig_3037 20 . T A 4077.64 . AB=0.2014;ABP=998.956;AC=6;AF=0.5;AN=12;AO=259;CIGAR=1X;DP=1286;DPB=1286;DPRA=0;EPP=4.89671;EPPR=2204.96;GTI=0;LEN=1;MEANALT=1.16667;MQM=51.7915;MQMR=59.9259;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.995127;PAO=0;PQA=0;PQR=0;PRO=0;QA=8995;QR=40971;RO=1026;RPL=0;RPP=565.422;RPPR=2230.94;RPR=259;RUN=1;SAF=137;SAP=4.89671;SAR=122;SRF=1023;SRP=2204.96;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:216:149,67:149:5960:67:2270:-138.347,0,-471.156 0/1:273:217,55:217:8657:55:1881:-86.1205,0,-696.359 0/1:112:79,33:79:3193:33:1119:-66.7769,0,-253.704 0/1:167:130,37:130:5191:37:1381:-73.7182,0,-414.555 0/1:267:232,35:232:9213:35:1233:-29.8854,0,-748.213 0/1:251:219,32:219:8757:32:1111:-24.138,0,-712.033 dDocent_Contig_3038 93 . G A 12795.3 . AB=0.273799;ABP=1020.75;AC=5;AF=0.416667;AN=12;AO=655;CIGAR=1X;DP=2679;DPB=2679;DPRA=0;EPP=1425.32;EPPR=4395.9;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=59.9916;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.97825;PAO=0;PQA=0;PQR=0;PRO=0;QA=22930;QR=69143;RO=2023;RPL=655;RPP=1425.32;RPPR=4395.9;RPR=0;RUN=1;SAF=655;SAP=1425.32;SAR=0;SRF=2023;SRP=4395.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:369:314,55:314:10679:55:1912:-61.2752,0,-850.024 0/1:467:385,82:385:13120:82:2888:-119.578,0,-1040.14 0/0:389:361,28:361:12417:28:962:0,-30.2129,-1030.57 0/1:461:395,66:395:13510:66:2323:-70.557,0,-1077 0/1:504:290,214:290:9926:214:7512:-524.421,0,-741.642 0/1:489:278,210:278:9491:210:7333:-512.925,0,-707.107 dDocent_Contig_3039 39 . G A 126.469 . AB=0.194444;ABP=32.2045;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=220;DPB=220;DPRA=0.978261;EPP=18.2106;EPPR=463.362;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.95283;PAO=0;PQA=0;PQR=0;PRO=0;QA=274;QR=8303;RO=212;RPL=0;RPP=18.2106;RPPR=463.362;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=212;SRP=463.362;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:1030:0:0:0,-7.82678,-92.9979 0/0:43:43,0:43:1660:0:0:0,-12.9443,-149.639 0/0:35:35,0:35:1393:0:0:0,-10.536,-125.629 0/0:30:30,0:30:1192:0:0:0,-9.0309,-107.563 0/0:50:50,0:50:1950:0:0:0,-15.0515,-175.702 0/1:36:28,7:28:1078:7:274:-14.1698,0,-86.4533 dDocent_Contig_3040 56 . T A 16347.6 . AB=0.0569801;ABP=601.378;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1M1D3M1X6M;DP=713;DPB=665.917;DPRA=2.83065;EPP=46.4397;EPPR=285.302;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=766;QR=4845;RO=130;RPL=20;RPP=46.4397;RPPR=285.302;RPR=0;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=130;SRP=285.302;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:100:27,0,65:27:998:0,65:0,2381:-186.473,-194.6,-276.237,0,-81.6583,-62.0913 0|0:62:1,0,60:1:39:0,60:0,2172:-191.865,-192.166,-195.372,-14.8085,-18.0618,0 0|0:94:19,0,70:19:707:0,70:0,2634:-210.178,-215.897,-273.762,0,-57.9385,-36.8664 0|0:106:47,0,58:47:1770:0,58:0,2065:-154.059,-168.207,-313.252,0,-145.014,-127.554 0|0:166:24,1,141:24:889:1,141:39,5220:-419.785,-423.804,-496.234,0,-69.5065,-30.268 1|0:185:12,19,153:12:442:19,153:727,5646:-481.626,-425.579,-456.001,-23.5314,0,-13.6112 dDocent_Contig_3041 98 . N C 3379.58 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=121;CIGAR=1X;DP=122;DPB=122;DPRA=0;EPP=265.758;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=43.562;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.975207;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4049;QR=0;RO=0;RPL=121;RPP=265.758;RPPR=0;RPR=0;RUN=1;SAF=121;SAP=265.758;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:23:0,22:0:0:22:708:-46.6378,-6.62266,0 1/1:13:0,13:0:0:13:441:-39.0253,-3.91339,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:5:0,5:0:0:5:168:-14.1022,-1.50515,0 1/1:48:0,48:0:0:48:1600:-140.029,-14.4494,0 1/1:32:0,32:0:0:32:1097:-93.8199,-9.63296,0 dDocent_Contig_3042 13 . G A 35785.9 . AB=0.0920727;ABP=3503.7;AC=1;AF=0.0833333;AN=12;AO=223;CIGAR=1X1M1X2M1X3M;DP=2422;DPB=2422.56;DPRA=0;EPP=487.249;EPPR=163.699;GTI=0;LEN=1;MEANALT=9;MQM=47.2556;MQMR=60;NS=6;NUMALT=5;ODDS=4.44089e-16;PAIRED=0.955157;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8448;QR=2822;RO=74;RPL=0;RPP=487.249;RPPR=163.699;RPR=223;RUN=1;SAF=223;SAP=487.249;SAR=0;SRF=74;SRP=163.699;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:390:15,62,26,123,0,129:15:571:62,26,123,0,129:2246,1033,2226,0,5005:-526.464,-351.367,-379.542,-499.214,-366.44,-538.224,-396.808,-264.043,-411.888,-406.617,-530.98,-398.206,-546.051,-443.643,-577.817,-132.791,0,-147.867,-45.478,-179.633,-140.8 0|0:383:13,39,21,178,0,93:13:487:39,21,178,0,93:1443,826,3769,0,3468:-475.44,-363.202,-391.349,-446.538,-370.273,-480.102,-235.979,-159.718,-243.059,-222.28,-479.353,-403.089,-486.424,-275.863,-519.239,-203.478,-127.208,-210.55,0,-243.367,-215.371 0|0:175:8,7,6,90,0,55:8:306:7,6,90,0,55:276,239,1897,0,2066:-260.295,-240.478,-263.487,-256.421,-259.313,-279.731,-139.957,-142.849,-158.8,-137.978,-262.703,-265.595,-281.537,-165.071,-287.819,-97.5999,-100.492,-116.439,0,-122.722,-106.165 0|0:334:16,27,1,159,0,106:16:616:27,1,159,0,106:1061,40,3518,0,3869:-484.457,-404.84,-447.296,-488.226,-454.376,-538.507,-254.646,-220.798,-304.179,-257.362,-489.273,-455.423,-538.809,-305.226,-539.856,-183.996,-150.142,-233.536,0,-234.584,-202.674 0|0:577:18,40,54,217,17,224:18:685:40,54,217,17,224:1549,2135,4914,373,8071:-904.092,-785.909,-830.054,-852.96,-785.545,-892.89,-578.397,-510.981,-578.048,-569.258,-885.645,-818.229,-885.28,-610.72,-936.713,-274.931,-207.509,-274.572,0,-307.255,-263.69 0|0:563:4,48,15,210,63,201:4:157:48,15,210,63,201:1873,577,5448,1461,7262:-939.069,-789.69,-788.154,-921.138,-783.469,-929.536,-556.535,-418.864,-550.316,-506.232,-844.085,-706.416,-837.865,-473.275,-838.034,-370.828,-233.149,-364.608,0,-287.555,-323.235 dDocent_Contig_3043 52 . A T 526.194 . AB=0.359375;ABP=14.0034;AC=2;AF=0.166667;AN=12;AO=28;CIGAR=1X;DP=256;DPB=256;DPRA=0.639344;EPP=63.8115;EPPR=498.106;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=991;QR=8785;RO=228;RPL=28;RPP=63.8115;RPPR=498.106;RPR=0;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=228;SRP=498.106;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:8,14:8:301:14:501:-38.8001,0,-20.8196 0/1:42:33,9:33:1268:9:326:-17.0411,0,-101.747 0/0:16:15,1:15:598:1:40:0,-0.820801,-50.1634 0/0:30:28,2:28:1063:2:77:0,-1.72207,-88.6469 0/0:61:61,0:61:2383:0:0:0,-18.3628,-214.648 0/0:85:83,2:83:3172:2:47:0,-21.1258,-281.127 dDocent_Contig_3045 13 . A G 21913.7 . AB=0.0784431;ABP=7736.3;AC=6;AF=0.5;AN=12;AO=393;CIGAR=1X3M;DP=5010;DPB=5010;DPRA=0;EPP=856.399;EPPR=6649.89;GTI=0;LEN=1;MEANALT=11.8333;MQM=59.8982;MQMR=59.9931;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.96047;PAO=0;PQA=0;PQR=0;PRO=0;QA=15582;QR=119870;RO=3061;RPL=0;RPP=856.399;RPPR=6649.89;RPR=393;RUN=1;SAF=393;SAP=856.399;SAR=0;SRF=3061;SRP=6649.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:674:412,169,57,19:412:16092:169,57,19:6488,2254,695:-358.491,0,-1271.97,-297.025,-1137.36,-1602.73,-428.001,-1268.33,-1565.37,-1745.13 0|1:970:661,157,71,54:661:25922:157,71,54:6085,2802,1987:-257.446,0,-2084.37,-225.891,-1901.1,-2336.16,-305.018,-1980.22,-2206.12,-2420.39 0|1:996:551,255,101,49:551:21622:255,101,49:9736,4020,1845:-545.882,0,-1701.37,-380.758,-1447.15,-2128.51,-569.765,-1636.15,-2016.93,-2333.16 0|1:904:542,211,63,47:542:21271:211,63,47:8054,2510,1763:-418.694,0,-1685.8,-375.168,-1542.64,-2105.54,-445.157,-1612.62,-1987.81,-2180.34 0|1:768:469,181,57,41:469:18429:181,57,41:6829,2241,1549:-292.55,0,-1461.26,-249.413,-1331.44,-1748.04,-325.457,-1407.48,-1656.92,-1828.89 0|1:698:426,181,44,32:426:16534:181,44,32:6905,1755,1203:-329.532,0,-1303.9,-313.722,-1214.35,-1658.89,-385.818,-1286.44,-1600.18,-1734.58 dDocent_Contig_3046 11 . A G 211.924 . AB=0.175676;ABP=70.6194;AC=3;AF=0.25;AN=12;AO=13;CIGAR=1X;DP=165;DPB=165;DPRA=0.813187;EPP=31.2394;EPPR=333.074;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.947368;PAO=0;PQA=0;PQR=0;PRO=0;QA=525;QR=6058;RO=152;RPL=0;RPP=31.2394;RPPR=333.074;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=152;SRP=333.074;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:809:0:0:0,-6.0206,-73.1262 0/1:22:19,3:19:762:3:122:-4.74983,0,-62.2796 0/1:20:18,2:18:720:2:82:-1.75908,0,-59.1011 0/1:32:24,8:24:956:8:321:-19.6247,0,-76.7075 0/0:32:32,0:32:1248:0:0:0,-9.63296,-112.583 0/0:39:39,0:39:1563:0:0:0,-11.7402,-140.907 dDocent_Contig_3048 98 . N T 94.5703 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=2X;DP=3;DPB=9.5;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=2;PQA=36;PQR=0;PRO=0;QA=104;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:3:0,3:0:0:3:104:-9.45649,-0.90309,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_3049 98 . N T 200.808 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=6;CIGAR=2X;DP=6;DPB=7;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=212;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:71:-6.74206,-0.60206,0 .:.:.:.:.:.:.:. 1|1:4:0,4:0:0:4:141:-13.037,-1.20412,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_3050 98 . N A 107.532 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=2X;DP=4;DPB=55.5;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0;PAO=63;PQA=1816;PQR=0;PRO=0;QA=114;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:69:-6.21486,-0.60206,0 1|1:1:0,1:0:0:1:10:-0.891323,-0.30103,0 1|1:1:0,1:0:0:1:35:-3.14988,-0.30103,0 dDocent_Contig_3051 107 . N G 17568.3 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=610;CIGAR=1X;DP=616;DPB=616;DPRA=0;EPP=1327.61;EPPR=0;GTI=0;LEN=1;MEANALT=1.83333;MQM=59.9984;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=19502;QR=0;RO=0;RPL=0;RPP=1327.61;RPPR=0;RPR=610;RUN=1;SAF=0;SAP=1327.61;SAR=610;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:65:0,63:0:0:63:1946:-175.295,-18.9649,0 1/1:135:0,134:0:0:134:4296:-386.757,-40.338,0 1/1:61:0,61:0:0:61:2024:-182.428,-18.3628,0 1/1:142:0,140:0:0:140:4580:-412.172,-42.1442,0 1/1:84:0,84:0:0:84:2564:-230.992,-25.2865,0 1/1:129:0,128:0:0:128:4092:-368.405,-38.5318,0 dDocent_Contig_3052 15 . G T 230.662 . AB=0.22449;ABP=35.3165;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=149;DPB=149;DPRA=0.98;EPP=26.8965;EPPR=302.673;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.84058;PAO=0;PQA=0;PQR=0;PRO=0;QA=443;QR=5506;RO=138;RPL=0;RPP=26.8965;RPPR=302.673;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=138;SRP=302.673;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:18,2:18:718:2:77:-1.28823,0,-58.9232 0/1:29:20,9:20:814:9:366:-24.5753,0,-64.8443 0/0:14:14,0:14:551:0:0:0,-4.21442,-49.9288 0/0:22:22,0:22:874:0:0:0,-6.62266,-78.9711 0/0:30:30,0:30:1168:0:0:0,-9.0309,-105.398 0/0:34:34,0:34:1381:0:0:0,-10.235,-124.542 dDocent_Contig_3053 13 . A C 754.382 . AB=0.156695;ABP=362.33;AC=1;AF=0.0833333;AN=12;AO=112;CIGAR=1X;DP=1563;DPB=1563;DPRA=0;EPP=229.154;EPPR=3132.13;GTI=0;LEN=1;MEANALT=1.33333;MQM=40.1429;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0625;PAIREDR=0.996549;PAO=0;PQA=0;PQR=0;PRO=0;QA=4427;QR=57831;RO=1449;RPL=0;RPP=246.215;RPPR=3149.47;RPR=112;RUN=1;SAF=110;SAP=229.154;SAR=2;SRF=1447;SRP=3132.13;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:206:194,12:194:7747:12:451:0,-23.6944,-658.504 0/1:351:296,55:296:11848:55:2162:-76.9611,0,-959.813 0/0:232:223,9:223:8884:9:367:0,-40.3142,-769.515 0/0:235:220,15:220:8775:15:602:0,-20.3121,-738.816 0/0:295:293,2:293:11707:2:78:0,-82.2998,-1046.28 0/0:244:223,19:223:8870:19:767:0,-15.0915,-739.651 dDocent_Contig_3054 11 . T G 10276.8 . AB=0.351768;ABP=213.521;AC=6;AF=0.5;AN=12;AO=388;CIGAR=2X1M4I2X3M3I5M;DP=1103;DPB=1313.31;DPRA=0;EPP=845.542;EPPR=1538.24;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=15220;QR=27604;RO=707;RPL=0;RPP=845.542;RPPR=1538.24;RPR=388;RUN=1;SAF=388;SAP=845.542;SAR=0;SRF=707;SRP=1538.24;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:142:79,62:79:3058:62:2419:-175.06,0,-232.524 0|1:153:103,49:103:4056:49:1916:-126.508,0,-318.921 0|1:241:107,132:107:4171:132:5196:-395.231,0,-303.086 0|1:150:91,58:91:3569:58:2272:-159.487,0,-276.107 0|1:215:161,53:161:6280:53:2080:-122.579,0,-500.234 0|1:202:166,34:166:6470:34:1337:-60.0321,0,-521.575 dDocent_Contig_3055 1 . N G 217.475 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=230;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:118:-11.0022,-0.90309,0 1/1:3:0,3:0:0:3:112:-10.4437,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_3056 163 . G C 66.4865 . AB=0.151515;ABP=37.8197;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=188;DPB=188;DPRA=1.06452;EPP=13.8677;EPPR=400.39;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.79235;PAO=0;PQA=0;PQR=0;PRO=0;QA=197;QR=7337;RO=183;RPL=5;RPP=13.8677;RPPR=400.39;RPR=0;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=400.39;SRR=183;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:878:0:0:0,-6.62266,-79.3315 0/0:38:38,0:38:1521:0:0:0,-11.4391,-137.134 0/1:33:28,5:28:1113:5:197:-8.17153,0,-90.5134 0/0:29:29,0:29:1158:0:0:0,-8.72987,-104.499 0/0:25:25,0:25:1011:0:0:0,-7.52575,-91.2849 0/0:41:41,0:41:1656:0:0:0,-12.3422,-149.266 dDocent_Contig_3057 89 . G T 102.656 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=2X1M3I1M1X1M2X1M5X;DP=6;DPB=7.78571;DPRA=1;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=1;PQA=0;PQR=173;PRO=6;QA=111;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:3:0,0:0:0:0:0:0,0,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:3:0,3:0:0:3:111:-10.0879,-0.90309,0 .:.:.:.:.:.:.:. dDocent_Contig_3058 54 . G A 596.719 . AB=0.230769;ABP=76.6733;AC=3;AF=0.25;AN=12;AO=31;CIGAR=1X;DP=563;DPB=563;DPRA=0.288515;EPP=70.3259;EPPR=1158.23;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1251;QR=21164;RO=532;RPL=31;RPP=70.3259;RPPR=1158.23;RPR=0;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=532;SRP=1158.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:19,2:19:761:2:81:-1.3641,0,-62.4895 0/0:89:85,4:85:3439:4:158:0,-12.1923,-294.935 0/1:58:38,20:38:1515:20:811:-55.8459,0,-119.13 0/1:38:33,5:33:1292:5:201:-7.03138,0,-105.099 0/0:94:94,0:94:3713:0:0:0,-28.2968,-334.183 0/0:263:263,0:263:10444:0:0:0,-79.1709,-939.279 dDocent_Contig_3059 98 . N C 67.6498 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=67;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:48:-4.55964,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:19:-1.89997,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_3060 1 . N G 144.158 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=7.37776;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=156;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:156:-14.4155,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_3061 33 . A T 103975 . AB=0.0920716;ABP=568.154;AC=1;AF=0.0833333;AN=12;AO=37;CIGAR=1X1M1X;DP=3049;DPB=3049;DPRA=0.81793;EPP=83.3548;EPPR=94.2121;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1429;QR=1636;RO=42;RPL=0;RPP=83.3548;RPPR=94.2121;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=42;SRP=94.2121;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:391:0,36,355:0:0:36,355:1393,14073:-1273.1,-1158.69,-1147.85,-114.795,0,-7.92976 0|0:494:11,1,478:11:426:1,478:36,19084:-1677.32,-1677.69,-1712.38,-108.877,-140.956,0 0|0:508:15,0,486:15:586:0,486:0,19297:-1682.09,-1686.61,-1734.78,-98.1325,-146.301,0 0|0:506:7,0,496:7:280:0,496:0,19662:-1742.46,-1744.56,-1767.63,-126.184,-149.311,0 0|0:579:9,0,568:9:344:0,568:0,22514:-1993.05,-1995.76,-2023.99,-142.784,-170.985,0 0|0:571:0,0,569:0:0:0,569:0,22587:-2030.67,-2030.67,-2030.67,-171.286,-171.286,0 dDocent_Contig_3062 137 . C A 1753.01 . AB=0.556034;ABP=9.33752;AC=6;AF=0.5;AN=12;AO=129;CIGAR=1X2M1X;DP=232;DPB=232;DPRA=0;EPP=283.13;EPPR=224.5;GTI=0;LEN=1;MEANALT=1.16667;MQM=22.124;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.735294;PAO=0;PQA=0;PQR=0;PRO=0;QA=4518;QR=3829;RO=102;RPL=0;RPP=283.13;RPPR=224.5;RPR=129;RUN=1;SAF=0;SAP=283.13;SAR=129;SRF=0;SRP=224.5;SRR=102;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:14:12,2:12:463:2:73:-0.119475,0,-37.8068 0|1:21:12,9:12:430:9:312:-9.92415,0,-32.7082 0|1:22:18,4:18:687:4:139:-1.73063,0,-55.5394 0|1:43:15,28:15:577:28:977:-41.7129,0,-39.328 0|1:41:24,16:24:888:16:562:-18.6172,0,-67.9599 0|1:91:21,70:21:784:70:2455:-112.231,0,-43.4894 dDocent_Contig_3063 107 . N T 44.8535 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X1M1I2M;DP=3;DPB=3.75;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=19;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=57;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:3:0,3:0:0:3:57:-4.48479,-0.90309,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_3064 24 . A T 7789.36 . AB=0.18652;ABP=2016.56;AC=2;AF=0.166667;AN=12;AO=559;CIGAR=1X;DP=5483;DPB=5483;DPRA=0;EPP=1216.86;EPPR=10688.8;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997765;PAO=0;PQA=0;PQR=0;PRO=0;QA=21124;QR=196703;RO=4921;RPL=0;RPP=1216.86;RPPR=10688.8;RPR=559;RUN=1;SAF=559;SAP=1216.86;SAR=0;SRF=4921;SRP=10688.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:727:689,37:689:27447:37:1388:0,-93.7763,-2342.62 0/0:899:875,23:875:34896:23:863:0,-192.707,-3059.48 0/0:602:570,32:570:22844:32:1254:0,-68.0786,-1940.8 0/0:896:868,27:868:34769:27:1032:0,-176.644,-3032.78 0/1:1152:1006,146:1006:40183:146:5543:-152.027,0,-3265.87 0/1:1207:913,294:913:36564:294:11044:-630.13,0,-2923.97 dDocent_Contig_3065 16 . C T 523.664 . AB=0.183544;ABP=140.445;AC=4;AF=0.333333;AN=12;AO=32;CIGAR=1X;DP=224;DPB=224;DPRA=0;EPP=72.4974;EPPR=419.933;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.974;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.989583;PAO=0;PQA=0;PQR=0;PRO=0;QA=1297;QR=7679;RO=192;RPL=0;RPP=72.4974;RPPR=419.933;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=192;SRP=419.933;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:34,1:34:1372:1:41:0,-6.44148,-119.631 0/1:44:36,8:36:1440:8:321:-16.0123,0,-116.603 0/1:42:34,8:34:1368:8:326:-17.0664,0,-110.728 0/0:31:29,2:29:1152:2:82:0,-1.55225,-96.1778 0/1:51:42,9:42:1657:9:363:-17.6813,0,-134.007 0/1:21:17,4:17:690:4:164:-8.82827,0,-56.1072 dDocent_Contig_3066 8 . T G 36946 . AB=0.522454;ABP=13.9321;AC=6;AF=0.5;AN=12;AO=1303;CIGAR=1X3M;DP=2494;DPB=2494;DPRA=0;EPP=2832.44;EPPR=2458.95;GTI=0;LEN=1;MEANALT=2.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.99079;PAIREDR=0.98939;PAO=0;PQA=0;PQR=0;PRO=0;QA=49355;QR=43552;RO=1131;RPL=0;RPP=2832.44;RPPR=2458.95;RPR=1303;RUN=1;SAF=1303;SAP=2832.44;SAR=0;SRF=1131;SRP=2458.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:318:166,0,151:166:6412:0,151:0,5745:-421.22,-471.191,-997.811,0,-526.623,-481.167 0|1:367:163,26,178:163:6227:26,178:970,6716:-501.332,-470.99,-974.073,0,-431.505,-457.332 0|1:306:140,0,165:140:5418:0,165:0,6227:-468.172,-510.316,-955.366,0,-445.043,-395.373 0|1:378:143,3,230:143:5520:3,230:116,8735:-673.274,-706.793,-1159.22,0,-443.83,-384.122 0|1:658:288,0,365:288:11066:0,365:0,13828:-1046.98,-1133.67,-2042.07,0,-908.397,-798.521 0|1:467:231,21,214:231:8909:21,214:766,8104:-594.843,-601.811,-1327.08,0,-669.035,-667.184 dDocent_Contig_3067 7 . T C 138615 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=4127;CIGAR=1X;DP=4236;DPB=4236;DPRA=0;EPP=8964.68;EPPR=235.358;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=158234;QR=4102;RO=107;RPL=0;RPP=8964.68;RPPR=235.358;RPR=4127;RUN=1;SAF=4127;SAP=8964.68;SAR=0;SRF=107;SRP=235.358;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:515:16,498:16:617:498:19029:-1655.74,-98.9861,0 1/1:769:33,736:33:1275:736:28220:-2423.08,-116.451,0 1/1:503:16,487:16:622:487:18663:-1622.37,-95.098,0 1/1:711:18,693:18:690:693:26563:-2326.67,-151.599,0 1/1:895:24,871:24:898:871:33380:-2921,-188.287,0 1/1:843:0,842:0:0:842:32379:-2911.83,-253.467,0 dDocent_Contig_3068 32 . G T 3979.63 . AB=0.136364;ABP=28.2783;AC=0;AF=0;AN=12;AO=3;CIGAR=1M1I1M1X1M;DP=544;DPB=586.75;DPRA=0;EPP=9.52472;EPPR=804.284;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=2.77556e-17;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=115;QR=14512;RO=369;RPL=0;RPP=9.52472;RPPR=804.284;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=369;SRP=804.284;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:90:74,0,16,0:74:2884:0,16,0:0,625,0:-29.4873,-51.7635,-288.793,0,-237.42,-232.603,-51.7635,-288.793,-237.42,-288.793 0|0:138:95,0,43,0:95:3740:0,43,0:0,1671,0:-109.085,-137.683,-445.354,0,-308.061,-295.116,-137.683,-445.354,-308.061,-445.354 0|0:123:88,0,31,0:88:3495:0,31,0:0,1160,0:-68.4501,-94.9408,-382.674,0,-287.712,-278.38,-94.9408,-382.674,-287.712,-382.674 0|0:126:71,0,55,0:71:2795:0,55,0:0,2149,0:-155.675,-177.048,-406.975,0,-230.319,-213.762,-177.048,-406.975,-230.319,-406.975 0|0:22:11,3,6,2:11:430:3,6,2:115,214,68:-14.122,-7.98687,-42.459,0,-25.932,-33.5639,-11.9222,-37.8504,-29.8605,-46.6871 0|0:45:30,0,13,1:30:1168:0,13,1:0,504,39:-32.3647,-41.3956,-137.379,0,-95.978,-92.0646,-38.1896,-134.173,-92.7721,-133.872 dDocent_Contig_3069 26 . T A 391.954 . AB=0.0439024;ABP=373.421;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X2M1X;DP=382;DPB=382;DPRA=1.08466;EPP=22.5536;EPPR=721.768;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.666667;PAIREDR=0.694864;PAO=0;PQA=0;PQR=0;PRO=0;QA=355;QR=12845;RO=331;RPL=0;RPP=22.5536;RPPR=721.768;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=331;SRP=721.768;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:39:31,4,3:31:1196:4,3:155,123:-3.39449,0,-96.9848,-2.56527,-88.0346,-99.8656 0|0:85:72,4,9:72:2803:4,9:160,350:-7.0738,-15.5644,-244.716,0,-217.165,-227.636 0|0:57:49,0,8:49:1923:0,8:0,316:-11.6449,-26.3953,-184.543,0,-158.542,-156.134 0|0:81:71,1,9:71:2750:1,9:40,343:-6.73968,-24.8158,-250.412,0,-222.584,-223.17 0|0:57:47,0,10:47:1840:0,10:0,404:-19.5613,-33.7098,-184.992,0,-151.684,-148.674 0|0:63:61,0,2:61:2333:0,2:0,72:0,-18.3628,-209.801,-12.1306,-203.929,-203.327 dDocent_Contig_3070 7 . T C 5532.92 . AB=0.595745;ABP=29.2066;AC=6;AF=0.5;AN=12;AO=196;CIGAR=1X1M1X;DP=329;DPB=329;DPRA=0;EPP=428.619;EPPR=289.645;GTI=0;LEN=1;MEANALT=1.16667;MQM=48.5408;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.287879;PAO=0;PQA=0;PQR=0;PRO=0;QA=7466;QR=5006;RO=132;RPL=0;RPP=428.619;RPPR=289.645;RPR=196;RUN=1;SAF=196;SAP=428.619;SAR=0;SRF=132;SRP=289.645;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:59:11,48:11:425:48:1825:-144.086,0,-20.8435 0|1:35:7,28:7:268:28:1069:-84.0347,0,-13.9479 0|1:35:5,30:5:194:30:1147:-92.2222,0,-7.29679 0|1:50:14,36:14:538:36:1368:-105.15,0,-33.7138 0|1:51:44,7:44:1658:7:270:-9.17777,0,-134.135 0|1:99:51,47:51:1923:47:1787:-129.843,0,-143.434 dDocent_Contig_3071 54 . G A 316.998 . AB=0.245614;ABP=35.049;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=214;DPB=214;DPRA=1.34375;EPP=35.5824;EPPR=435.133;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.866667;PAIREDR=0.738693;PAO=0;PQA=0;PQR=0;PRO=0;QA=596;QR=7887;RO=199;RPL=15;RPP=35.5824;RPPR=435.133;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=199;SRP=435.133;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:39,0:39:1551:0:0:0,-11.7402,-139.83 0/0:34:34,0:34:1364:0:0:0,-10.235,-123.021 0/0:29:28,1:28:1099:1:40:0,-4.73419,-95.1997 0/0:22:22,0:22:876:0:0:0,-6.62266,-79.1473 0/0:33:33,0:33:1308:0:0:0,-9.93399,-117.982 0/1:57:43,14:43:1689:14:556:-33.2227,0,-135.075 dDocent_Contig_3072 7 . C T 2186.86 . AB=0.211099;ABP=669.246;AC=5;AF=0.416667;AN=12;AO=220;CIGAR=1X;DP=1214;DPB=1214;DPRA=0;EPP=480.734;EPPR=2159.28;GTI=0;LEN=1;MEANALT=1.16667;MQM=38.4;MQMR=57.7724;NS=6;NUMALT=1;ODDS=0;PAIRED=0.677273;PAIREDR=0.964753;PAO=0;PQA=0;PQR=0;PRO=0;QA=8380;QR=38217;RO=993;RPL=0;RPP=480.734;RPPR=2159.28;RPR=220;RUN=1;SAF=220;SAP=480.734;SAR=0;SRF=993;SRP=2159.28;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:131:103,28:103:3951:28:1071:-38.259,0,-312.018 0/1:190:133,57:133:5143:57:2177:-77.478,0,-381.269 0/1:109:80,29:80:3086:29:1117:-50.8348,0,-242.362 0/1:210:167,42:167:6391:42:1593:-35.5044,0,-478.388 0/0:295:269,26:269:10339:26:992:0,-15.2334,-835.505 0/1:279:241,38:241:9307:38:1430:-25.8319,0,-736.957 dDocent_Contig_3073 10 . C A 11176.9 . AB=0.358772;ABP=200.508;AC=6;AF=0.5;AN=12;AO=409;CIGAR=1X;DP=1140;DPB=1140;DPRA=0;EPP=891.143;EPPR=1588.19;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.591687;PAIREDR=0.524658;PAO=0;PQA=0;PQR=0;PRO=0;QA=16350;QR=29300;RO=730;RPL=0;RPP=891.143;RPPR=1588.19;RPR=409;RUN=1;SAF=409;SAP=891.143;SAR=0;SRF=730;SRP=1588.19;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:175:125,49:125:4961:49:1958:-123.638,0,-393.603 0/1:257:153,104:153:6168:104:4195:-300.132,0,-477.491 0/1:137:91,46:91:3670:46:1818:-122.589,0,-289.06 0/1:189:116,73:116:4663:73:2885:-202.86,0,-362.679 0/1:163:95,68:95:3827:68:2716:-195.489,0,-295.346 0/1:219:150,69:150:6011:69:2778:-184.202,0,-474.824 dDocent_Contig_3074 98 . N T 285.19 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=10;CIGAR=1X;DP=10;DPB=10;DPRA=0;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=298;QR=0;RO=0;RPL=10;RPP=24.725;RPPR=0;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:45:-4.27434,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:21:-2.09995,-0.30103,0 1/1:3:0,3:0:0:3:106:-9.8891,-0.90309,0 1/1:4:0,4:0:0:4:126:-11.6517,-1.20412,0 dDocent_Contig_3075 10 . A G 1242.52 . AB=0.135211;ABP=823.656;AC=1;AF=0.0833333;AN=12;AO=114;CIGAR=1X;DP=4292;DPB=4292;DPRA=0.966849;EPP=250.558;EPPR=9075.42;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9966;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998803;PAO=0;PQA=0;PQR=0;PRO=0;QA=4446;QR=165859;RO=4178;RPL=0;RPP=250.558;RPPR=9075.42;RPR=114;RUN=1;SAF=114;SAP=250.558;SAR=0;SRF=4178;SRP=9075.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:683:683,0:683:27044:0:0:0,-205.603,-2431.67 0/0:932:931,1:931:37053:1:10:0,-279.56,-3330.37 0/0:369:364,5:364:14464:5:197:0,-92.9745,-1282.6 0/0:780:780,0:780:31004:0:0:0,-234.803,-2787.62 0/1:710:614,96:614:24341:96:3772:-125.774,0,-1974.92 0/0:818:806,12:806:31953:12:467:0,-203.867,-2830.56 dDocent_Contig_3076 27 . T C 7485.28 . AB=0.40367;ABP=55.7233;AC=6;AF=0.5;AN=12;AO=264;CIGAR=1X;DP=654;DPB=654;DPRA=0;EPP=576.279;EPPR=847.713;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.537275;PAO=0;PQA=0;PQR=0;PRO=0;QA=10613;QR=15648;RO=389;RPL=0;RPP=576.279;RPPR=847.713;RPR=264;RUN=1;SAF=264;SAP=576.279;SAR=0;SRF=389;SRP=847.713;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:80:31,49:31:1229:49:1966:-153.048,0,-86.7907 0/1:156:72,84:72:2899:84:3346:-254.226,0,-214.03 0/1:92:71,21:71:2868:21:856:-49.6541,0,-230.518 0/1:93:36,57:36:1435:57:2306:-179.691,0,-101.403 0/1:83:63,19:63:2552:19:764:-44.2809,0,-205.01 0/1:150:116,34:116:4665:34:1375:-78.8494,0,-374.596 dDocent_Contig_3077 32 . G C 81056.1 . AB=0.877023;ABP=1147.54;AC=10;AF=0.833333;AN=12;AO=2357;CIGAR=1X;DP=2495;DPB=2495;DPRA=0;EPP=5121.17;EPPR=302.673;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=94253;QR=5496;RO=138;RPL=0;RPP=5121.17;RPPR=302.673;RPR=2357;RUN=1;SAF=2357;SAP=5121.17;SAR=0;SRF=138;SRP=302.673;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:305:6,299:6:244:299:11932:-1050.7,-69.4753,0 1/1:373:3,370:3:121:370:14803:-1319.83,-101.004,0 1/1:514:2,512:2:78:512:20615:-1846.12,-147.327,0 1/1:376:13,363:13:511:363:14497:-1257.27,-66.8507,0 0/1:514:54,460:54:2165:460:18338:-1494.2,0,-40.2873 0/1:413:60,353:60:2377:353:14068:-1140.72,0,-89.7503 dDocent_Contig_3078 7 . C T 1222.44 . AB=0.174208;ABP=410.5;AC=6;AF=0.5;AN=12;AO=77;CIGAR=1X;DP=442;DPB=442;DPRA=0;EPP=170.214;EPPR=795.598;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.805195;PAIREDR=0.824658;PAO=0;PQA=0;PQR=0;PRO=0;QA=2938;QR=14086;RO=365;RPL=0;RPP=170.214;RPPR=795.598;RPR=77;RUN=1;SAF=77;SAP=170.214;SAR=0;SRF=365;SRP=795.598;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:75:67,8:67:2592:8:310:-5.68633,0,-210.892 0/1:84:63,21:63:2410:21:800:-47.0387,0,-191.821 0/1:73:66,7:66:2550:7:268:-2.50864,0,-207.72 0/1:86:66,20:66:2558:20:769:-43.6501,0,-204.523 0/1:63:49,14:49:1893:14:523:-28.4399,0,-151.649 0/1:61:54,7:54:2083:7:268:-6.12057,0,-169.338 dDocent_Contig_3079 28 . T G 81.736 . AB=0.101351;ABP=207.305;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X1M1X;DP=784;DPB=784;DPRA=1.16352;EPP=35.5824;EPPR=1670.7;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=599;QR=30509;RO=768;RPL=0;RPP=35.5824;RPPR=1670.7;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=768;SRP=1670.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:102:102,0:102:4071:0:0:0,-30.7051,-366.38 0|0:124:124,0:124:4923:0:0:0,-37.3277,-442.984 0|0:116:116,0:116:4584:0:0:0,-34.9195,-412.501 0|0:136:136,0:136:5387:0:0:0,-40.9401,-484.693 0|0:158:157,0:157:6272:0:0:0,-47.2617,-564.151 0|1:148:133,15:133:5272:15:599:-9.69647,0,-429.809 dDocent_Contig_3080 39 . C A 15233.3 . AB=0.420597;ABP=72.6681;AC=6;AF=0.5;AN=12;AO=535;CIGAR=1X;DP=1272;DPB=1272;DPRA=0;EPP=1164.75;EPPR=1599.04;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.955102;PAO=0;PQA=0;PQR=0;PRO=0;QA=21299;QR=29344;RO=735;RPL=0;RPP=1164.75;RPPR=1599.04;RPR=535;RUN=1;SAF=535;SAP=1164.75;SAR=0;SRF=735;SRP=1599.04;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:170:122,48:122:4863:48:1866:-116.975,0,-386.39 0/1:203:119,84:119:4669:84:3362:-241.528,0,-359.026 0/1:206:111,95:111:4473:95:3812:-281.064,0,-340.478 0/1:218:114,104:114:4514:104:4115:-304.7,0,-340.561 0/1:232:128,104:128:5171:104:4176:-305.966,0,-395.391 0/1:243:141,100:141:5654:100:3968:-284.317,0,-435.858 dDocent_Contig_3081 9 . T C 184.892 . AB=0.144231;ABP=117.347;AC=2;AF=0.166667;AN=12;AO=24;CIGAR=1X;DP=389;DPB=389;DPRA=0.961194;EPP=55.1256;EPPR=795.598;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0.665753;PAO=0;PQA=0;PQR=0;PRO=0;QA=929;QR=13995;RO=365;RPL=0;RPP=55.1256;RPPR=795.598;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=365;SRP=795.598;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:46:43,3:43:1648:3:117:0,-2.937,-137.67 0/0:100:95,5:95:3606:5:192:0,-12.453,-307.014 0/1:44:38,6:38:1473:6:230:-7.82101,0,-119.599 0/0:67:67,0:67:2598:0:0:0,-20.169,-234.008 0/1:60:51,9:51:1956:9:351:-13.89,0,-158.219 0/0:72:71,1:71:2714:1:39:0,-17.7776,-240.546 dDocent_Contig_3082 8 . T G 17771.9 . AB=0.372853;ABP=256.466;AC=6;AF=0.5;AN=12;AO=673;CIGAR=1X;DP=1805;DPB=1805;DPRA=0;EPP=1464.41;EPPR=2458.95;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998514;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=25903;QR=43341;RO=1131;RPL=0;RPP=1464.41;RPPR=2458.95;RPR=673;RUN=1;SAF=673;SAP=1464.41;SAR=0;SRF=1131;SRP=2458.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:251:136,115:136:5210:115:4431:-323.288,0,-393.342 0/1:325:187,138:187:7182:138:5318:-380.776,0,-548.395 0/1:206:129,77:129:4920:77:2952:-203.831,0,-380.81 0/1:308:202,106:202:7733:106:4083:-274.836,0,-603.065 0/1:317:186,131:186:7113:131:5057:-359.708,0,-544.614 0/1:398:291,106:291:11183:106:4062:-245.969,0,-886.343 dDocent_Contig_3083 54 . T A 212.214 . AB=0.137931;ABP=135.096;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=460;DPB=460;DPRA=2.22018;EPP=46.4397;EPPR=956.287;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.9;PAIREDR=0.835991;PAO=0;PQA=0;PQR=0;PRO=0;QA=800;QR=17403;RO=439;RPL=20;RPP=46.4397;RPPR=956.287;RPR=0;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=439;SRP=956.287;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:45:45,0:45:1786:0:0:0,-13.5463,-160.951 0/0:72:72,0:72:2869:0:0:0,-21.6742,-258.317 0/0:45:45,0:45:1799:0:0:0,-13.5463,-162.124 0/0:56:56,0:56:2177:0:0:0,-16.8577,-196.102 0/1:116:99,16:99:3946:16:638:-22.7443,0,-320.129 0/0:126:122,4:122:4826:4:162:0,-22.963,-419.292 dDocent_Contig_3084 9 . C T 2263.65 . AB=0.245413;ABP=248.466;AC=6;AF=0.5;AN=12;AO=107;CIGAR=1X;DP=436;DPB=436;DPRA=0;EPP=235.358;EPPR=717.425;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4076;QR=12595;RO=329;RPL=0;RPP=235.358;RPPR=717.425;RPR=107;RUN=1;SAF=107;SAP=235.358;SAR=0;SRF=329;SRP=717.425;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:68:50,18:50:1908:18:687:-41.6924,0,-151.493 0/1:102:81,21:81:3076:21:805:-42.0702,0,-246.297 0/1:57:48,9:48:1849:9:347:-14.4311,0,-149.496 0/1:68:51,17:51:1964:17:640:-37.4615,0,-156.531 0/1:55:35,20:35:1356:20:761:-52.2584,0,-105.767 0/1:86:64,22:64:2442:22:836:-49.6733,0,-194.098 dDocent_Contig_3085 10 . A C 731.005 . AB=0.298969;ABP=37.0599;AC=2;AF=0.166667;AN=12;AO=32;CIGAR=1X;DP=293;DPB=293;DPRA=1.01031;EPP=72.4974;EPPR=569.765;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.56705;PAO=0;PQA=0;PQR=0;PRO=0;QA=1286;QR=10339;RO=261;RPL=0;RPP=72.4974;RPPR=569.765;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=261;SRP=569.765;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:32,0:32:1260:0:0:0,-9.63296,-113.67 0/0:64:62,2:62:2461:2:81:0,-11.5802,-213.95 0/0:35:34,1:34:1364:1:40:0,-6.54037,-119.021 0/0:65:65,0:65:2588:0:0:0,-19.5669,-233.059 0/1:57:33,24:33:1279:24:968:-70.2595,0,-98.2111 0/1:40:35,5:35:1387:5:197:-6.06283,0,-113.047 dDocent_Contig_3086 8 . T C 96.1173 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=19;CIGAR=1M1X11M;DP=1237;DPB=1236.92;DPRA=0.977064;EPP=44.2683;EPPR=2324.31;GTI=0;LEN=1;MEANALT=6.5;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=1;PAIREDR=0.996258;PAO=0;PQA=0;PQR=0;PRO=0;QA=741;QR=41806;RO=1069;RPL=0;RPP=44.2683;RPPR=2324.31;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=1069;SRP=2324.31;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:193:170,7,10,0,0,2:170:6644:7,10,0,0,2:271,375,0,0,77:0,-28.9115,-573.032,-20.4662,-544.426,-563.677,-51.1751,-575.14,-566.687,-597.401,-51.1751,-575.14,-566.687,-597.401,-597.401,-44.8524,-568.817,-560.365,-591.079,-591.079,-590.476 0|0:243:209,18,4,0,6,0:209:8176:18,4,0,6,0:700,159,0,228,0:0,-5.36332,-672.22,-49.8197,-664.547,-720.867,-62.9153,-677.638,-722.071,-735.163,-44.2137,-658.94,-703.373,-716.465,-714.658,-62.9153,-677.638,-722.071,-735.163,-716.465,-735.163 0|0:116:87,10,0,0,6,8:87:3400:10,0,0,6,8:382,0,0,232,324:-5.1434,0,-276.513,-31.333,-279.523,-310.857,-31.333,-279.523,-310.857,-310.857,-12.2764,-260.467,-291.801,-291.801,-289.995,-4.60968,-252.806,-284.14,-284.14,-265.084,-281.732 0|0:259:217,23,7,0,3,8:217:8443:23,7,0,3,8:889,274,0,113,323:-7.69013,0,-686.917,-50.4858,-671.313,-742.223,-73.0136,-693.84,-744.33,-766.858,-63.7546,-684.581,-735.07,-757.598,-756.695,-46.3828,-667.212,-717.702,-740.23,-730.97,-737.822 0|0:233:213,0,1,7,0,0:213:8378:0,1,7,0,0:0,41,273,0,0:0,-64.1194,-753.309,-60.7333,-749.925,-749.623,-41.668,-730.868,-727.483,-728.76,-64.1194,-753.309,-749.925,-730.868,-753.309,-64.1194,-753.309,-749.925,-730.868,-753.309,-753.309 0|0:193:173,0,2,12,0,2:173:6765:0,2,12,0,2:0,81,468,0,80:0,-52.0782,-608.273,-45.3975,-601.594,-600.992,-13.6099,-569.803,-563.123,-566.19,-52.0782,-608.273,-601.594,-569.803,-608.273,-45.4871,-601.683,-595.004,-563.212,-601.683,-601.081 dDocent_Contig_3087 107 . N A 882.298 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=29;CIGAR=1X;DP=29;DPB=29;DPRA=0;EPP=65.983;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0.965517;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=970;QR=0;RO=0;RPL=0;RPP=65.983;RPPR=0;RPR=29;RUN=1;SAF=0;SAP=65.983;SAR=29;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:9:0,9:0:0:9:284:-25.8685,-2.70927,0 1/1:20:0,20:0:0:20:686:-62.0603,-6.0206,0 dDocent_Contig_3088 107 . A C 71.7998 . AB=0.115789;ABP=124.818;AC=3;AF=0.25;AN=12;AO=13;CIGAR=1M1D1X;DP=212;DPB=207.333;DPRA=0.777108;EPP=31.2394;EPPR=432.962;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.769231;PAIREDR=0.762626;PAO=0;PQA=0;PQR=0;PRO=0;QA=523;QR=7899;RO=198;RPL=0;RPP=31.2394;RPPR=432.962;RPR=13;RUN=1;SAF=0;SAP=31.2394;SAR=13;SRF=0;SRP=432.962;SRR=198;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:28:27,0:27:1062:0:0:0,-8.12781,-95.4612 0|0:34:32,2:32:1289:2:81:0,-2.54929,-108.59 0|1:28:25,3:25:1009:3:123:-3.03595,0,-82.6766 0|1:31:28,3:28:1103:3:123:-2.13286,0,-90.223 0|1:36:31,5:31:1243:5:196:-7.17685,0,-101.306 0|0:55:55,0:55:2193:0:0:0,-16.5566,-197.543 dDocent_Contig_3089 7 . T C 76522 . AB=0.877911;ABP=1760.79;AC=9;AF=0.75;AN=12;AO=2399;CIGAR=1X;DP=2636;DPB=2636;DPRA=0;EPP=5212.37;EPPR=511.135;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=92244;QR=8977;RO=234;RPL=0;RPP=5212.37;RPPR=511.135;RPR=2399;RUN=1;SAF=2399;SAP=5212.37;SAR=0;SRF=234;SRP=511.135;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:355:24,330:24:922:330:12634:-1053.24,-23.3785,0 0/1:514:84,430:84:3243:430:16580:-1336.61,0,-137.285 0/1:417:39,377:39:1500:377:14481:-1177.27,0,-9.93888 1/1:455:21,433:21:794:433:16669:-1427.59,-65.0018,0 0/1:486:49,437:49:1871:437:16776:-1362.67,0,-22.339 1/1:409:17,392:17:647:392:15104:-1300.04,-64.5553,0 dDocent_Contig_3090 98 . N C 204.188 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=204;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:2:0,2:0:0:2:66:-6.26831,-0.60206,0 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 dDocent_Contig_3091 27 . T A 34268.1 . AB=0.911602;ABP=269.358;AC=11;AF=0.916667;AN=12;AO=1006;CIGAR=1X;DP=1059;DPB=1059;DPRA=0;EPP=2187.51;EPPR=113.755;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=40104;QR=2010;RO=51;RPL=0;RPP=2187.51;RPPR=113.755;RPR=1006;RUN=1;SAF=1006;SAP=2187.51;SAR=0;SRF=51;SRP=113.755;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:228:14,214:14:551:214:8544:-718.552,-18.7057,0 1/1:229:14,215:14:552:215:8531:-717.296,-18.9163,0 0/1:181:16,165:16:633:165:6592:-538.511,0,-2.8155 1/1:123:7,115:7:274:115:4597:-388.627,-12.1095,0 1/1:144:0,144:0:0:144:5740:-516.407,-43.3483,0 1/1:154:0,153:0:0:153:6100:-548.617,-46.0576,0 dDocent_Contig_3092 36 . T G 31301 . AB=0.650925;ABP=313.043;AC=6;AF=0.5;AN=12;AO=1020;CIGAR=1X;DP=1567;DPB=1567;DPRA=0;EPP=2217.91;EPPR=1186.46;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.99633;PAO=0;PQA=0;PQR=0;PRO=0;QA=40162;QR=21904;RO=545;RPL=0;RPP=2217.91;RPPR=1186.46;RPR=1020;RUN=1;SAF=1020;SAP=2217.91;SAR=0;SRF=545;SRP=1186.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:282:61,221:61:2455:221:8733:-700.606,0,-136.194 0/1:364:95,269:95:3793:269:10669:-849.956,0,-231.795 0/1:121:39,82:39:1577:82:3251:-256.213,0,-105.734 0/1:316:60,255:60:2421:255:10008:-805.227,0,-123.107 0/1:232:140,91:140:5620:91:3596:-253.734,0,-435.662 0/1:252:150,102:150:6038:102:3905:-275.581,0,-467.307 dDocent_Contig_3093 8 . T C 99248.6 . AB=0.0369536;ABP=8268.16;AC=0;AF=0;AN=12;AO=164;CIGAR=2X1M;DP=4438;DPB=4438;DPRA=0;EPP=359.132;EPPR=1394.92;GTI=0;LEN=1;MEANALT=5.66667;MQM=60;MQMR=59.9891;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.985959;PAO=0;PQA=0;PQR=0;PRO=0;QA=6259;QR=24340;RO=641;RPL=0;RPP=359.132;RPPR=1394.92;RPR=164;RUN=1;SAF=164;SAP=359.132;SAR=0;SRF=641;SRP=1394.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:647:97,22,33,485,8:97:3648:22,33,485,8:845,1243,18687,310:-1505.26,-1465.09,-1757.34,-1432.6,-1662.12,-1721.55,0,-229.513,-197.03,-152.882,-1508.99,-1738.5,-1706.02,-273.412,-1805.46 0|0:869:119,51,28,632,26:119:4547:51,28,632,26:1926,1055,24339,952:-1962.64,-1840.98,-2198.72,-1912.02,-2127.62,-2276.68,0,-215.606,-286.647,-182.844,-1920.68,-2136.28,-2207.32,-295.304,-2285.94 0|0:556:91,35,12,389,29:91:3471:35,12,389,29:1346,462,14964,1116:-1201.16,-1118.04,-1392.26,-1190.62,-1364.87,-1471.76,0,-174.247,-246.821,-167.654,-1136.93,-1311.17,-1383.75,-193.128,-1412.95 0|0:668:105,47,40,455,9:105:3961:47,40,455,9:1794,1529,17358,333:-1392.38,-1276.8,-1587.27,-1298.53,-1475.96,-1611.11,0,-177.432,-199.158,-187.65,-1396.75,-1574.18,-1595.91,-297.381,-1718.66 0|0:915:106,23,30,687,68:106:4019:23,30,687,68:871,1157,26439,2593:-2138.83,-2099.33,-2421.93,-2075.72,-2333.84,-2396.22,0,-258.121,-234.515,-122.722,-1958.02,-2216.14,-2192.53,-116.813,-2267.08 0|0:783:123,12,21,563,63:123:4694:12,21,563,63:460,813,21599,2355:-1735.82,-1735.09,-2116.57,-1706.06,-2053.4,-2084.83,0,-347.34,-318.307,-215.615,-1580.02,-1927.36,-1898.33,-192.276,-1946.15 dDocent_Contig_3094 24 . A T 1271.89 . AB=0.286458;ABP=79.0571;AC=5;AF=0.416667;AN=12;AO=57;CIGAR=1X;DP=223;DPB=223;DPRA=0;EPP=126.784;EPPR=363.475;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2219;QR=6521;RO=166;RPL=0;RPP=126.784;RPPR=363.475;RPR=57;RUN=1;SAF=57;SAP=126.784;SAR=0;SRF=166;SRP=363.475;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:28,13:28:1126:13:514:-34.2647,0,-89.2814 0/1:34:26,8:26:1013:8:326:-19.4748,0,-81.2289 0/1:30:17,13:17:673:13:520:-38.1164,0,-51.869 0/1:35:21,14:21:820:14:565:-40.6576,0,-63.572 0/1:52:45,7:45:1736:7:214:-3.89662,0,-140.815 0/0:31:29,2:29:1153:2:80:0,-1.74035,-96.4632 dDocent_Contig_3095 97 . C G 102.889 . AB=0.16129;ABP=64.7922;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=371;DPB=371;DPRA=0.8;EPP=33.4109;EPPR=756.511;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.936599;PAO=0;PQA=0;PQR=0;PRO=0;QA=456;QR=11440;RO=347;RPL=14;RPP=33.4109;RPPR=756.511;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=347;SRP=756.511;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:40,4:40:1327:4:121:0,-2.05477,-108.535 0/1:62:52,10:52:1719:10:335:-11.8118,0,-136.33 0/0:30:29,0:29:980:0:0:0,-8.72987,-88.1599 0/0:58:57,0:57:1871:0:0:0,-17.1587,-168.59 0/0:82:79,0:79:2595:0:0:0,-23.7814,-233.475 0/0:95:90,0:90:2948:0:0:0,-27.0927,-265.279 dDocent_Contig_3096 1 . N G 113.73 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=122;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:122:-11.3725,-0.90309,0 ./.:.:.:.:.:.:.:. dDocent_Contig_3098 13 . A C 138.3 . AB=0.114458;ABP=217.332;AC=2;AF=0.166667;AN=12;AO=19;CIGAR=1X;DP=485;DPB=485;DPRA=1.04075;EPP=44.2683;EPPR=1014.92;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=737;QR=18455;RO=466;RPL=0;RPP=44.2683;RPPR=1014.92;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=466;SRP=1014.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:54,0:54:2115:0:0:0,-16.2556,-190.537 0/0:83:83,0:83:3267:0:0:0,-24.9855,-294.105 0/0:62:62,0:62:2438:0:0:0,-18.6639,-219.568 0/0:120:120,0:120:4774:0:0:0,-36.1236,-429.577 0/1:97:87,10:87:3460:10:399:-7.06599,0,-282.24 0/1:69:60,9:60:2401:9:338:-9.9859,0,-195.474 dDocent_Contig_3099 98 . N T 155.942 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=4X;DP=5;DPB=26;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0.6;PAIREDR=0;PAO=48;PQA=1611;PQR=0;PRO=0;QA=168;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:2:0,2:0:0:2:67:-6.02748,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:1:0,1:0:0:1:34:-3.05894,-0.30103,0 .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:67:-6.02908,-0.60206,0 dDocent_Contig_3100 106 . N G 190.357 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=6;CIGAR=2X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=195;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 .:.:.:.:.:.:.:. 1|1:4:0,4:0:0:4:125:-11.5597,-1.20412,0 .:.:.:.:.:.:.:. 1|1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_3101 63 . C T 435.129 . AB=0.162679;ABP=209.57;AC=2;AF=0.166667;AN=12;AO=34;CIGAR=1X;DP=899;DPB=899;DPRA=0.605797;EPP=76.8404;EPPR=1881.33;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1211;QR=30387;RO=865;RPL=34;RPP=76.8404;RPPR=1881.33;RPR=0;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=865;SRP=1881.33;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:138:118,20:118:4190:20:713:-22.9552,0,-335.743 0/0:230:230,0:230:8118:0:0:0,-69.2369,-730.651 0/1:71:57,14:57:2000:14:498:-23.7795,0,-158.884 0/0:199:199,0:199:6932:0:0:0,-59.905,-623.964 0/0:197:197,0:197:6886:0:0:0,-59.3029,-619.818 0/0:64:64,0:64:2261:0:0:0,-19.2659,-203.752 dDocent_Contig_3102 80 . C T 110.935 . AB=0.186047;ABP=39.8243;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=347;DPB=347;DPRA=0.707237;EPP=20.3821;EPPR=739.139;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.693215;PAO=0;PQA=0;PQR=0;PRO=0;QA=277;QR=12488;RO=339;RPL=5;RPP=4.09604;RPPR=7.01375;RPR=3;RUN=1;SAF=5;SAP=4.09604;SAR=3;SRF=182;SRP=7.01375;SRR=157;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:43:35,8:35:1272:8:277:-12.3154,0,-101.821 0/0:66:66,0:66:2448:0:0:0,-19.868,-220.526 0/0:61:61,0:61:2263:0:0:0,-18.3628,-203.881 0/0:57:57,0:57:2123:0:0:0,-17.1587,-191.293 0/0:58:58,0:58:2117:0:0:0,-17.4597,-190.76 0/0:62:62,0:62:2265:0:0:0,-18.6639,-204.052 dDocent_Contig_3103 85 . C T 8483.39 . AB=0.645946;ABP=71.4645;AC=7;AF=0.583333;AN=12;AO=315;CIGAR=2X1M;DP=452;DPB=452;DPRA=0;EPP=687.024;EPPR=283.13;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.831746;PAIREDR=0.744186;PAO=0;PQA=0;PQR=0;PRO=0;QA=10749;QR=4357;RO=129;RPL=315;RPP=687.024;RPPR=283.13;RPR=0;RUN=1;SAF=315;SAP=687.024;SAR=0;SRF=129;SRP=283.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:67:22,0,45:22:753:0,45:0,1529:-117.732,-124.354,-185.479,0,-61.4663,-47.92 0|1:103:49,0,54:49:1641:0,54:0,1855:-136.227,-150.978,-283.864,0,-133.225,-116.969 0|1:63:24,0,39:24:815:0,39:0,1309:-99.1412,-106.366,-172.468,0,-66.4402,-54.7001 0|1:69:26,0,42:26:873:0,42:0,1435:-108.714,-116.541,-187.256,0,-70.7902,-58.1469 0|1:68:8,0,59:8:275:0,59:0,2020:-161.744,-164.152,-186.486,0,-22.4963,-4.73556 1|1:82:0,6,76:0:0:6,76:208,2601:-234.003,-217.095,-215.289,-22.8783,-5.62482,0 dDocent_Contig_3104 136 . A G 109.271 . AB=0.25;ABP=13.8677;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=194;DPB=194;DPRA=0.694444;EPP=18.2106;EPPR=409.076;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.764706;PAO=0;PQA=0;PQR=0;PRO=0;QA=283;QR=7504;RO=187;RPL=7;RPP=18.2106;RPPR=409.076;RPR=0;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=409.076;SRR=187;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1133:0:0:0,-8.42884,-102.25 0/0:61:61,0:61:2429:0:0:0,-18.3628,-218.744 0/0:19:19,0:19:775:0:0:0,-5.71957,-70.0683 0/1:20:15,5:15:598:5:201:-12.4499,0,-48.1361 0/0:30:28,2:28:1119:2:82:0,-1.25122,-93.2147 0/0:36:36,0:36:1450:0:0:0,-10.8371,-130.745 dDocent_Contig_3105 22 . G A 7715.47 . AB=0.310484;ABP=312.48;AC=2;AF=0.166667;AN=12;AO=310;CIGAR=1X;DP=2122;DPB=2122;DPRA=1.16562;EPP=676.167;EPPR=3933.38;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.998895;PAO=0;PQA=0;PQR=0;PRO=0;QA=12003;QR=71517;RO=1810;RPL=0;RPP=676.167;RPPR=3933.38;RPR=310;RUN=1;SAF=310;SAP=676.167;SAR=0;SRF=1810;SRP=3933.38;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:187:186,1:186:7348:1:38:0,-52.4953,-657.163 0/0:467:467,0:467:18359:0:0:0,-140.581,-1650.88 0/0:170:170,0:170:6819:0:0:0,-51.1751,-613.389 0/0:306:305,1:305:12022:1:40:0,-88.1195,-1077.15 0/1:550:364,185:364:14303:185:7182:-480.783,0,-1120.88 0/1:442:318,123:318:12666:123:4743:-293.985,0,-1006.16 dDocent_Contig_3106 63 . T C 3547.1 . AB=0.542601;ABP=6.52555;AC=6;AF=0.5;AN=12;AO=121;CIGAR=1X;DP=223;DPB=223;DPRA=0;EPP=265.758;EPPR=224.5;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.917355;PAIREDR=0.754902;PAO=0;PQA=0;PQR=0;PRO=0;QA=4791;QR=4016;RO=102;RPL=121;RPP=265.758;RPPR=224.5;RPR=0;RUN=1;SAF=121;SAP=265.758;SAR=0;SRF=102;SRP=224.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:18,16:18:719:16:634:-47.1547,0,-54.8009 0/1:38:23,15:23:884:15:579:-40.9971,0,-68.4227 0/1:41:17,24:17:675:24:970:-75.2568,0,-48.7365 0/1:47:24,23:24:948:23:902:-67.3323,0,-71.4769 0/1:23:11,12:11:444:12:471:-35.8129,0,-33.3921 0/1:40:9,31:9:346:31:1235:-99.3777,0,-19.4498 dDocent_Contig_3107 98 . N A 103.54 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=104;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_3108 36 . A G 6872.35 . AB=0.298673;ABP=321.275;AC=6;AF=0.5;AN=12;AO=270;CIGAR=1X;DP=904;DPB=904;DPRA=0;EPP=589.308;EPPR=1379.72;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.996296;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10770;QR=25324;RO=634;RPL=0;RPP=589.308;RPPR=1379.72;RPR=270;RUN=1;SAF=270;SAP=589.308;SAR=0;SRF=634;SRP=1379.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:133:108,25:108:4343:25:1016:-51.694,0,-350.778 0/1:184:121,63:121:4819:63:2483:-168.232,0,-378.216 0/1:121:90,31:90:3594:31:1226:-74.1861,0,-287.057 0/1:211:158,53:158:6302:53:2130:-128.36,0,-503.417 0/1:66:40,26:40:1606:26:1044:-74.3832,0,-124.902 0/1:189:117,72:117:4660:72:2871:-201.601,0,-362.427 dDocent_Contig_3109 8 . C T 8792.92 . AB=0.827586;ABP=327.383;AC=6;AF=0.5;AN=12;AO=288;CIGAR=1X;DP=348;DPB=348;DPRA=0;EPP=628.394;EPPR=133.299;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.927083;PAIREDR=0.833333;PAO=0;PQA=0;PQR=0;PRO=0;QA=11042;QR=2323;RO=60;RPL=0;RPP=628.394;RPPR=133.299;RPR=288;RUN=1;SAF=288;SAP=628.394;SAR=0;SRF=60;SRP=133.299;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:52:11,41:11:429:41:1571:-126.005,0,-23.3121 0/1:57:8,49:8:310:49:1861:-150.581,0,-11.1049 0/1:56:7,49:7:273:49:1886:-153.129,0,-8.08033 0/1:82:15,67:15:579:67:2574:-207.167,0,-27.7684 0/1:41:11,30:11:426:30:1153:-91.7279,0,-26.3525 0/1:60:8,52:8:306:52:1997:-161.904,0,-9.83866 dDocent_Contig_3110 45 . C A 419.714 . AB=0.181818;ABP=119.085;AC=2;AF=0.166667;AN=12;AO=29;CIGAR=1X;DP=365;DPB=365;DPRA=1.22561;EPP=65.983;EPPR=732.625;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1133;QR=13373;RO=336;RPL=0;RPP=65.983;RPPR=732.625;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=336;SRP=732.625;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:69:64,5:64:2548:5:197:0,-2.66555,-211.348 0/0:72:72,0:72:2835:0:0:0,-21.6742,-255.263 0/1:122:102,20:102:4070:20:780:-33.7878,0,-329.558 0/0:75:75,0:75:3002:0:0:0,-22.5772,-270.269 0/0:17:17,0:17:678:0:0:0,-5.11751,-61.3494 0/1:10:6,4:6:240:4:156:-11.4054,0,-18.9635 dDocent_Contig_3111 38 . A G 192.825 . AB=0.146067;ABP=99.8482;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=472;DPB=472;DPRA=1.16188;EPP=31.2394;EPPR=999.716;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.769231;PAIREDR=0.59695;PAO=0;PQA=0;PQR=0;PRO=0;QA=525;QR=18253;RO=459;RPL=0;RPP=31.2394;RPPR=999.716;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=459;SRP=999.716;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:66:66,0:66:2630:0:0:0,-19.868,-236.824 0/0:120:120,0:120:4801:0:0:0,-36.1236,-431.998 0/0:55:55,0:55:2202:0:0:0,-16.5566,-198.354 0/0:81:81,0:81:3219:0:0:0,-24.3834,-289.767 0/0:61:61,0:61:2430:0:0:0,-18.3628,-218.847 0/1:89:76,13:76:2971:13:525:-20.8054,0,-240.705 dDocent_Contig_3112 33 . C G 1490.99 . AB=0.118081;ABP=1719.72;AC=3;AF=0.25;AN=12;AO=274;CIGAR=1X;DP=4117;DPB=4117;DPRA=0;EPP=597.994;EPPR=8332.78;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.963504;PAIREDR=0.990094;PAO=0;PQA=0;PQR=0;PRO=0;QA=10735;QR=150795;RO=3836;RPL=0;RPP=597.994;RPPR=8332.78;RPR=274;RUN=1;SAF=274;SAP=597.994;SAR=0;SRF=3836;SRP=8332.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:357:288,69:288:11398:69:2677:-133.605,0,-917.634 0/0:578:537,38:537:21139:38:1499:0,-38.1289,-1765.73 0/1:426:390,36:390:15392:36:1447:-2.24029,0,-1255.91 0/1:572:517,55:517:20269:55:2116:-18.4362,0,-1650.5 0/0:1002:950,51:950:37204:51:2004:0,-120.866,-3164.73 0/0:1182:1154,25:1154:45393:25:992:0,-265.742,-3991.82 dDocent_Contig_3113 12 . A T 6211.01 . AB=0.313878;ABP=234.997;AC=6;AF=0.5;AN=12;AO=242;CIGAR=1X;DP=771;DPB=771;DPRA=0;EPP=528.507;EPPR=1151.72;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9587;QR=20566;RO=529;RPL=0;RPP=528.507;RPPR=1151.72;RPR=242;RUN=1;SAF=242;SAP=528.507;SAR=0;SRF=529;SRP=1151.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:123:103,20:103:4020:20:791:-34.4838,0,-324.811 0/1:138:126,12:126:4892:12:479:-1.91958,0,-398.708 0/1:113:86,27:86:3359:27:1079:-63.3853,0,-268.394 0/1:175:126,49:126:4863:49:1927:-120.965,0,-384.964 0/1:41:22,19:22:856:19:739:-54.4868,0,-65.015 0/1:181:66,115:66:2576:115:4572:-356.945,0,-177.522 dDocent_Contig_3114 16 . C A 871.185 . AB=0.248031;ABP=143.079;AC=4;AF=0.333333;AN=12;AO=78;CIGAR=1X;DP=503;DPB=503;DPRA=0;EPP=172.385;EPPR=917.221;GTI=0;LEN=1;MEANALT=1;MQM=33.5769;MQMR=59.9247;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990588;PAO=0;PQA=0;PQR=0;PRO=0;QA=3050;QR=16923;RO=425;RPL=0;RPP=172.385;RPPR=925.886;RPR=78;RUN=1;SAF=78;SAP=172.385;SAR=0;SRF=424;SRP=917.221;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:47:40,7:40:1607:7:269:-9.11169,0,-130.717 0/1:62:54,8:54:2155:8:308:-6.04445,0,-175.467 0/1:51:26,25:26:1014:25:973:-40.3322,0,-76.194 0/0:98:97,1:97:3853:1:40:0,-25.7548,-342.734 0/0:151:137,14:137:5492:14:550:0,-6.6278,-455.283 0/1:94:71,23:71:2802:23:910:-38.852,0,-224.006 dDocent_Contig_3115 23 . C A 136606 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=3882;CIGAR=1X;DP=3956;DPB=3956;DPRA=0;EPP=8432.67;EPPR=150.67;GTI=0;LEN=1;MEANALT=1.5;MQM=59.9925;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=154530;QR=2578;RO=68;RPL=0;RPP=8432.67;RPPR=150.67;RPR=3882;RUN=1;SAF=3882;SAP=8432.67;SAR=0;SRF=68;SRP=150.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:674:1,672:1:10:672:26641:-2394.26,-201.848,0 1/1:716:11,705:11:417:705:28013:-2480.85,-177.66,0 1/1:474:0,474:0:0:474:18934:-1701.64,-142.688,0 1/1:714:14,698:14:511:698:27748:-2448.54,-168.391,0 1/1:625:9,613:9:349:613:24459:-2167.4,-155.8,0 1/1:753:33,720:33:1291:720:28735:-2467.11,-110.211,0 dDocent_Contig_3116 107 . N T 530.675 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=18;CIGAR=1X;DP=18;DPB=18;DPRA=0;EPP=42.0968;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=565;QR=0;RO=0;RPL=0;RPP=42.0968;RPPR=0;RPR=18;RUN=1;SAF=0;SAP=42.0968;SAR=18;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 1/1:3:0,3:0:0:3:83:-7.74436,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:6:0,6:0:0:6:207:-18.9682,-1.80618,0 1/1:5:0,5:0:0:5:148:-13.6115,-1.50515,0 1/1:3:0,3:0:0:3:98:-9.14405,-0.90309,0 dDocent_Contig_3117 8 . T A 980.979 . AB=0.0512821;ABP=480.456;AC=4;AF=0.333333;AN=12;AO=20;CIGAR=1X3M;DP=556;DPB=556;DPRA=0;EPP=46.4397;EPPR=973.658;GTI=0;LEN=1;MEANALT=3.2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.3;PAIREDR=0.997763;PAO=0;PQA=0;PQR=0;PRO=0;QA=768;QR=16856;RO=447;RPL=0;RPP=46.4397;RPPR=973.658;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=447;SRP=973.658;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:87:79,2,4,1:79:2928:2,4,1:78,157,38:0,-17.3613,-256.321,-10.8414,-244.009,-249.218,-20.6627,-253.806,-247.305,-259.918 0|1:78:67,0,11,0:67:2491:0,11,0:0,404,0:-13.2202,-33.3892,-237.25,0,-204.229,-200.918,-33.3892,-237.25,-204.229,-237.25 0|0:118:108,0,4,5:108:4102:0,4,5:0,156,191:0,-32.5112,-368.894,-19.6753,-356.07,-354.866,-16.829,-353.222,-340.398,-351.717 0|1:111:92,0,15,4:92:3483:0,15,4:0,578,154:-19.7664,-47.4612,-332.991,0,-285.529,-281.014,-34.8166,-320.346,-272.884,-319.142 0|1:85:54,16,12,2:54:2037:16,12,2:614,470,76:-34.1418,0,-162.11,-11.7451,-128.276,-175.065,-44.1649,-160.694,-172.444,-210.493 0|1:77:47,5,17,8:47:1815:5,17,8:195,639,309:-38.1914,-36.3087,-183.872,0,-133.033,-143.945,-26.959,-159.998,-123.684,-173.619 dDocent_Contig_3118 47 . T A 115.526 . AB=0.142857;ABP=80.5629;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=193;DPB=193;DPRA=1.13821;EPP=24.725;EPPR=400.39;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.6;PAIREDR=0.655738;PAO=0;PQA=0;PQR=0;PRO=0;QA=390;QR=7327;RO=183;RPL=0;RPP=24.725;RPPR=400.39;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=183;SRP=400.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:1034:0:0:0,-7.82678,-93.3447 0/0:55:55,0:55:2185:0:0:0,-16.5566,-196.82 0/0:11:11,0:11:445:0:0:0,-3.31133,-40.4046 0/0:31:31,0:31:1254:0:0:0,-9.33193,-113.128 0/1:32:28,4:28:1129:4:159:-5.05899,0,-92.2589 0/1:38:32,6:32:1280:6:231:-9.71535,0,-104.025 dDocent_Contig_3119 209 . N G 219.755 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=8.76405;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=240;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:6:0,6:0:0:6:240:-21.9754,-1.80618,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_3120 98 . N C 661.159 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=22;CIGAR=1X;DP=23;DPB=23;DPRA=0;EPP=50.7827;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.954545;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=706;QR=0;RO=0;RPL=22;RPP=50.7827;RPPR=0;RPR=0;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:63:-5.98364,-0.60206,0 1/1:2:0,2:0:0:2:61:-5.79402,-0.60206,0 1/1:4:0,3:0:0:3:87:-7.9927,-0.90309,0 1/1:2:0,2:0:0:2:66:-6.26818,-0.60206,0 1/1:10:0,10:0:0:10:341:-31.0207,-3.0103,0 1/1:3:0,3:0:0:3:88:-8.21101,-0.90309,0 dDocent_Contig_3122 34 . T C 58984.2 . AB=0.372283;ABP=817.817;AC=6;AF=0.5;AN=12;AO=2141;CIGAR=1X;DP=5751;DPB=5751;DPRA=0;EPP=4652.13;EPPR=7835.51;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=0.982718;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=84963;QR=144091;RO=3607;RPL=0;RPP=4652.13;RPPR=7835.51;RPR=2141;RUN=1;SAF=2141;SAP=4652.13;SAR=0;SRF=3607;SRP=7835.51;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:842:592,250:592:23648:250:9924:-639.057,0,-1872.77 0/1:1070:787,282:787:31364:282:11204:-685.699,0,-2498.01 0/1:731:383,348:383:15310:348:13892:-1029.16,0,-1156.62 0/1:714:291,423:291:11582:423:16814:-1296.96,0,-826.612 0/1:1142:709,432:709:28377:432:17015:-1186.47,0,-2207.76 0/1:1252:845,406:845:33810:406:16114:-1072.3,0,-2663.04 dDocent_Contig_3123 107 . N A 108.201 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=7.37776;PAIRED=0.5;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=117;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:117:-10.8198,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_3124 11 . C T 56169.7 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=48;CIGAR=2X;DP=1695;DPB=1695;DPRA=1.66509;EPP=107.241;EPPR=72.4974;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1729;QR=1271;RO=32;RPL=0;RPP=107.241;RPPR=72.4974;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=32;SRP=72.4974;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:274:12,0,262:12:460:0,262:0,10346:-888.745,-892.357,-930.103,-40.7409,-78.8699,0 0|0:280:5,1,274:5:202:1,274:31,10904:-962.082,-961.099,-977.451,-65.751,-80.0093,0 0|0:137:0,0,137:0:0:0,137:0,5433:-488.828,-488.828,-488.828,-41.2411,-41.2411,0 0|0:225:7,0,217:7:285:0,217:0,8593:-746.882,-748.989,-772.499,-41.6411,-65.3235,0 0|0:350:0,28,322:0:0:28,322:990,12751:-1146.32,-1065.7,-1057.28,-96.9317,-15.9582,0 0|0:429:8,19,396:8:324:19,396:708,15711:-1383.27,-1327.72,-1348.72,-92.4855,-61.2716,0 dDocent_Contig_3125 8 . C T 21173.1 . AB=0.59292;ABP=45.3828;AC=8;AF=0.666667;AN=12;AO=671;CIGAR=2X4M;DP=921;DPB=920.667;DPRA=0;EPP=1460.07;EPPR=435.133;GTI=0;LEN=1;MEANALT=4.16667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=25411;QR=7716;RO=199;RPL=0;RPP=1460.07;RPPR=435.133;RPR=671;RUN=1;SAF=671;SAP=1460.07;SAR=0;SRF=199;SRP=435.133;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:130:86,8,30,0:86:3314:8,30,0:312,1151,0:-68.5888,-68.83,-338.534,0,-246.465,-263.08,-94.4774,-340.942,-272.111,-366.589 0|1:149:17,0,125,0:17:661:0,125,0:0,4719,0:-381.635,-386.752,-441.072,0,-54.316,-16.6873,-386.752,-441.072,-54.316,-441.072 0|1:88:11,0,75,0:11:433:0,75,0:0,2817,0:-227.436,-230.747,-266.371,0,-35.616,-13.0387,-230.747,-266.371,-35.616,-266.371 0|1:198:85,2,105,0:85:3308:2,105,0:80,3991,0:-301.714,-320.711,-591.968,0,-265.266,-240.248,-327.302,-592.57,-271.856,-599.161 1|1:127:0,1,113,7:0:0:1,113,7:38,4284,261:-385.272,-382.155,-381.854,-34.0164,-30.8997,0,-363.907,-360.79,-12.6553,-361.8 1|1:229:0,0,223,1:0:0:0,223,1:0,8449,25:-759.888,-759.888,-759.888,-67.1297,-67.1297,0,-757.94,-757.94,-65.1955,-757.639 dDocent_Contig_3126 9 . C G 20787.6 . AB=0.801282;ABP=371.994;AC=8;AF=0.666667;AN=12;AO=667;CIGAR=1X;DP=780;DPB=780;DPRA=0;EPP=1451.38;EPPR=246.215;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=25520;QR=4325;RO=112;RPL=0;RPP=1451.38;RPPR=246.215;RPR=667;RUN=1;SAF=667;SAP=1451.38;SAR=0;SRF=112;SRP=246.215;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:125:8,117:8:311:117:4491:-375.893,-9.27444,0 0/1:74:12,62:12:462:62:2388:-192.853,0,-19.6545 0/1:73:18,55:18:700:55:2124:-169.413,0,-41.359 0/1:187:39,147:39:1504:147:5559:-443.909,0,-79.2506 0/1:134:23,111:23:886:111:4216:-339.186,0,-39.7217 1/1:187:12,175:12:462:175:6742:-564.733,-14.3627,0 dDocent_Contig_3127 30 . A G 187.648 . AB=0.258065;ABP=18.771;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=307;DPB=307;DPRA=0.561594;EPP=20.3821;EPPR=652.281;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9532;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.531773;PAO=0;PQA=0;PQR=0;PRO=0;QA=325;QR=11853;RO=299;RPL=0;RPP=20.3821;RPPR=652.281;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=299;SRP=652.281;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1626:0:0:0,-12.3422,-146.571 0/0:55:55,0:55:2167:0:0:0,-16.5566,-195.21 0/0:37:37,0:37:1473:0:0:0,-11.1381,-132.816 0/0:82:82,0:82:3244:0:0:0,-24.6845,-292.031 0/1:31:23,8:23:926:8:325:-20.2877,0,-74.3132 0/0:61:61,0:61:2417:0:0:0,-18.3628,-217.687 dDocent_Contig_3128 107 . N G 184.246 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=184;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:63:-5.98377,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:52:-4.93952,-0.60206,0 dDocent_Contig_3130 43 . A T 671.35 . AB=0.218543;ABP=106.91;AC=4;AF=0.333333;AN=12;AO=35;CIGAR=1X;DP=198;DPB=198;DPRA=0;EPP=79.0118;EPPR=356.96;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.857143;PAIREDR=0.656442;PAO=0;PQA=0;PQR=0;PRO=0;QA=1396;QR=6415;RO=163;RPL=0;RPP=79.0118;RPPR=356.96;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=163;SRP=356.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:25,1:25:953:1:40:0,-3.8311,-82.0615 0/1:39:33,6:33:1292:6:243:-10.5074,0,-104.805 0/1:31:26,5:26:1025:5:202:-9.22956,0,-83.2085 0/0:21:20,1:20:796:1:41:0,-2.22706,-67.8633 0/1:30:20,10:20:807:10:392:-26.6038,0,-63.9151 0/1:51:39,12:39:1542:12:478:-28.016,0,-123.669 dDocent_Contig_3131 98 . N A 123.823 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=124;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:63:-5.98364,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:25:-2.49986,-0.30103,0 1/1:2:0,2:0:0:2:36:-3.41967,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_3132 1 . N G 118.945 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=120;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:79:-7.49724,-0.60206,0 dDocent_Contig_3133 29 . T G 65702.8 . AB=0.599443;ABP=311.369;AC=6;AF=0.5;AN=12;AO=2152;CIGAR=1X;DP=3590;DPB=3590;DPRA=0;EPP=4676.02;EPPR=3116.9;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=85197;QR=52517;RO=1434;RPL=0;RPP=4676.02;RPPR=3116.9;RPR=2152;RUN=1;SAF=2152;SAP=4676.02;SAR=0;SRF=1434;SRP=3116.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:526:133,393:133:4922:393:15564:-1241.24,0,-284.698 0/1:574:152,422:152:5590:422:16755:-1333.86,0,-330.335 0/1:471:118,351:118:4336:351:13857:-1104.69,0,-248.887 0/1:633:210,423:210:7664:423:16700:-1311.16,0,-499.082 0/1:696:389,305:389:14319:305:12152:-883.678,0,-1078.99 0/1:690:432,258:432:15686:258:10169:-706.882,0,-1203.4 dDocent_Contig_3134 40 . C T 80.9356 . AB=0.103448;ABP=201.064;AC=2;AF=0.166667;AN=12;AO=25;CIGAR=1X;DP=571;DPB=571;DPRA=0.971649;EPP=57.2971;EPPR=1186.46;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=59.956;NS=6;NUMALT=1;ODDS=0;PAIRED=0.88;PAIREDR=0.93945;PAO=0;PQA=0;PQR=0;PRO=0;QA=999;QR=21908;RO=545;RPL=0;RPP=57.2971;RPPR=1186.46;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=545;SRP=1186.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:74:64,9:64:2605:9:347:-9.30878,0,-212.241 0/0:130:122,8:122:4874:8:326:0,-9.42403,-408.826 0/1:71:65,6:65:2596:6:244:-0.965695,0,-212.394 0/0:102:100,2:100:4024:2:82:0,-22.9254,-354.353 0/0:76:76,0:76:3061:0:0:0,-22.8783,-275.558 0/0:118:118,0:118:4748:0:0:0,-35.5215,-427.207 dDocent_Contig_3135 22 . G A 70381 . AB=0.0448;ABP=1127.87;AC=0;AF=0;AN=12;AO=56;CIGAR=1X1M1X;DP=2248;DPB=2248;DPRA=0.52283;EPP=124.613;EPPR=257.073;GTI=0;LEN=1;MEANALT=2.4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.982143;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2230;QR=4622;RO=117;RPL=0;RPP=124.613;RPPR=257.073;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=117;SRP=257.073;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:370:48,4,317:48:1896:4,317:161,12458:-1010.13,-1011.31,-1166.11,0,-142.739,-60.5821 0|0:328:26,3,299:26:1020:3,299:119,11796:-968.752,-966.783,-1049.76,-6.13007,-80.2118,0 0|0:319:14,24,281:14:554:24,281:965,11133:-951.015,-875.705,-914.073,-38.999,-5.06114,0 0|0:255:29,24,201:29:1152:24,201:945,7940:-644.57,-575.563,-663.178,0,-17.1063,-34.3378 0|0:354:0,1,353:0:0:1,353:40,13914:-1250.88,-1247.58,-1247.28,-106.264,-102.569,0 0|0:622:0,0,620:0:0:0,620:0,24650:-2215.98,-2215.98,-2215.98,-186.639,-186.639,0 dDocent_Contig_3136 9 . G T 2461.46 . AB=0.354717;ABP=51.5939;AC=1;AF=0.0833333;AN=12;AO=114;CIGAR=1X;DP=2482;DPB=2482;DPRA=0.597593;EPP=250.558;EPPR=5142.89;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999155;PAO=0;PQA=0;PQR=0;PRO=0;QA=4410;QR=90229;RO=2367;RPL=0;RPP=250.558;RPPR=5142.89;RPR=114;RUN=1;SAF=114;SAP=250.558;SAR=0;SRF=2367;SRP=5142.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:409:409,0:409:15574:0:0:0,-123.121,-1400.95 0/0:504:504,0:504:19174:0:0:0,-151.719,-1724.68 0/0:475:475,0:475:18174:0:0:0,-142.989,-1634.73 0/0:523:522,0:522:19858:0:0:0,-157.138,-1785.8 0/1:265:171,94:171:6575:94:3637:-247.669,0,-511.879 0/0:306:286,20:286:10874:20:773:0,-22.2167,-908.368 dDocent_Contig_3137 67 . G A 64241.9 . AB=0.164896;ABP=2298.08;AC=5;AF=0.416667;AN=12;AO=388;CIGAR=2X;DP=2353;DPB=2353;DPRA=0;EPP=845.542;EPPR=298.331;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.22045e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=14657;QR=5129;RO=136;RPL=388;RPP=845.542;RPPR=298.331;RPR=0;RUN=1;SAF=388;SAP=845.542;SAR=0;SRF=136;SRP=298.331;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:451:24,106,321:24:870:106,321:3980,11999:-1230.25,-911.448,-950.569,-255.009,0,-229.408 1|0:475:11,80,384:11:410:80,384:3018,14484:-1397.43,-1153.41,-1162.89,-213.769,0,-131.738 1|0:260:13,61,186:13:505:61,186:2371,6995:-722.482,-531.563,-554.695,-153.335,0,-138.838 1|0:462:32,68,362:32:1218:68,362:2523,13642:-1214.74,-1017.95,-1097.39,-106.511,0,-97.4432 0|0:398:38,25,335:38:1434:25,335:945,12711:-1030.8,-964.781,-1074.78,0,-40.0617,-16.6762 1|0:307:18,48,241:18:692:48,241:1820,9177:-839.71,-695.906,-738.268,-92.4063,0,-76.671 dDocent_Contig_3138 98 . N T 361.334 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=16;CIGAR=1X;DP=18;DPB=18;DPRA=0;EPP=37.7539;EPPR=0;GTI=0;LEN=1;MEANALT=1.33333;MQM=59.4375;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=381;QR=0;RO=0;RPL=16;RPP=37.7539;RPPR=0;RPR=0;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,2:0:0:2:62:-5.75185,-0.60206,0 1/1:5:0,5:0:0:5:116:-10.6693,-1.50515,0 1/1:2:0,2:0:0:2:34:-3.22979,-0.60206,0 1/1:3:0,2:0:0:2:51:-4.65871,-0.60206,0 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 1/1:4:0,4:0:0:4:111:-10.2656,-1.20412,0 dDocent_Contig_3139 14 . T A 5627.03 . AB=0.351261;ABP=117.347;AC=6;AF=0.5;AN=12;AO=209;CIGAR=1X;DP=595;DPB=595;DPRA=0;EPP=456.848;EPPR=841.199;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.727273;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=8350;QR=15277;RO=386;RPL=0;RPP=456.848;RPPR=841.199;RPR=209;RUN=1;SAF=209;SAP=456.848;SAR=0;SRF=386;SRP=841.199;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:79:57,22:57:2239:22:875:-55.2773,0,-177.899 0/1:109:75,34:75:2963:34:1364:-90.2049,0,-233.961 0/1:135:123,12:123:4903:12:487:-3.54241,0,-400.534 0/1:170:117,53:117:4618:53:2110:-138.904,0,-364.381 0/1:56:6,50:6:243:50:1996:-162.975,0,-5.38992 0/1:46:8,38:8:311:38:1518:-123.019,0,-14.5008 dDocent_Contig_3140 98 . N A 2171.48 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=80;CIGAR=1X;DP=80;DPB=80;DPRA=0;EPP=176.728;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=59.95;MQMR=0;NS=6;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2385;QR=0;RO=0;RPL=80;RPP=176.728;RPPR=0;RPR=0;RUN=1;SAF=80;SAP=176.728;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:15:0,15:0:0:15:460:-41.6965,-4.51545,0 1/1:9:0,9:0:0:9:253:-23.0467,-2.70927,0 1/1:14:0,14:0:0:14:436:-39.5417,-4.21442,0 1/1:16:0,16:0:0:16:477:-43.2157,-4.81648,0 1/1:9:0,9:0:0:9:247:-22.5009,-2.70927,0 1/1:17:0,17:0:0:17:512:-46.3687,-5.11751,0 dDocent_Contig_3141 17 . A G 3979.3 . AB=0.302505;ABP=178.841;AC=4;AF=0.333333;AN=12;AO=169;CIGAR=1X;DP=903;DPB=903;DPRA=4.96;EPP=369.989;EPPR=1596.87;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.7793;NS=6;NUMALT=1;ODDS=0;PAIRED=0.994083;PAIREDR=0.97139;PAO=0;PQA=0;PQR=0;PRO=0;QA=6688;QR=29125;RO=734;RPL=0;RPP=369.989;RPPR=1596.87;RPR=169;RUN=1;SAF=169;SAP=369.989;SAR=0;SRF=734;SRP=1596.87;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:120:95,25:95:3767:25:996:-53.8079,0,-302.917 0/1:241:164,77:164:6524:77:3051:-202.125,0,-511.557 0/1:128:77,51:77:3035:51:2016:-143.1,0,-234.712 0/0:349:337,12:337:13369:12:461:0,-63.2315,-1160.43 0/0:35:35,0:35:1388:0:0:0,-10.536,-119.138 0/1:30:26,4:26:1042:4:164:-6.119,0,-85.0381 dDocent_Contig_3142 58 . C T 845.784 . AB=0.1;ABP=58.6;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X2M1X;DP=224;DPB=224;DPRA=2.26415;EPP=11.6962;EPPR=402.561;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=158;QR=7265;RO=184;RPL=4;RPP=11.6962;RPPR=402.561;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=184;SRP=402.561;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:28:28,0,0:28:1087:0,0:0,0:0,-8.42884,-98.1194,-8.42884,-98.1194,-98.1194 0|0:94:69,0,25:69:2748:0,25:0,999:-61.9106,-82.6817,-308.956,0,-226.673,-219.147 0|0:37:27,0,10:27:1057:0,10:0,401:-25.3107,-33.4385,-120.332,0,-87.2916,-84.2813 0|1:40:36,4,0:36:1421:4,0:158,0:-2.55945,0,-116.113,-13.3965,-117.317,-130.319 0|0:6:6,0,0:6:242:0,0:0,0:0,-1.80618,-22.1575,-1.80618,-22.1575,-22.1575 0|0:19:18,0,1:18:710:0,1:0,38:0,-5.41854,-63.8452,-1.9223,-60.7295,-60.4284 dDocent_Contig_3143 43 . G A 163595 . AB=0.834034;ABP=3460.01;AC=8;AF=0.666667;AN=12;AO=5109;CIGAR=1X;DP=5819;DPB=5819;DPRA=0;EPP=11097.1;EPPR=1542.58;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=198553;QR=27382;RO=709;RPL=0;RPP=11097.1;RPPR=1542.58;RPR=5109;RUN=1;SAF=5109;SAP=11097.1;SAR=0;SRF=709;SRP=1542.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:878:90,788:90:3419:788:30387:-2468.33,0,-43.499 0/1:1089:217,872:217:8316:872:33916:-2722,0,-420.308 0/1:729:171,557:171:6625:557:21800:-1741.17,0,-376.799 0/1:871:113,758:113:4422:758:29563:-2396.23,0,-135.779 1/1:1108:84,1024:84:3273:1024:39742:-3279.06,-38.8724,0 1/1:1144:34,1110:34:1327:1110:43145:-3759.92,-224.673,0 dDocent_Contig_3144 22 . C T 285.126 . AB=0.150794;ABP=136.47;AC=2;AF=0.166667;AN=12;AO=31;CIGAR=1X;DP=400;DPB=400;DPRA=0;EPP=70.3259;EPPR=804.284;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1239;QR=14698;RO=369;RPL=0;RPP=70.3259;RPPR=804.284;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=369;SRP=804.284;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:104:102,2:102:4047:2:81:0,-23.6214,-356.525 0/1:59:47,12:47:1885:12:483:-26.0603,0,-152.091 0/1:67:60,7:60:2367:7:283:-5.67399,0,-193.012 0/0:66:63,3:63:2495:3:109:0,-9.70499,-214.519 0/0:52:49,3:49:1964:3:122:0,-4.28107,-165.581 0/0:52:48,4:48:1940:4:161:0,-0.778075,-159.916 dDocent_Contig_3145 30 . T A 84852.4 . AB=0.0549748;ABP=4446.33;AC=1;AF=0.0833333;AN=12;AO=171;CIGAR=1X3M1X;DP=3024;DPB=3024;DPRA=0;EPP=374.332;EPPR=532.85;GTI=0;LEN=1;MEANALT=3.33333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6663;QR=9520;RO=244;RPL=0;RPP=374.332;RPPR=532.85;RPR=171;RUN=1;SAF=171;SAP=374.332;SAR=0;SRF=244;SRP=532.85;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:451:61,19,0,370:61:2413:19,0,370:716,0,14602:-1182.99,-1142.69,-1335.56,-1201.35,-1341.27,-1399.94,0,-139.945,-198.603,-87.2216 0|0:509:74,29,0,405:74:2835:29,0,405:1127,0,15821:-1278.18,-1207.85,-1431.76,-1300.46,-1440.49,-1533.09,0,-140.029,-232.635,-110.718 0|0:520:49,38,0,433:49:1925:38,0,433:1499,0,17167:-1398.2,-1289.61,-1436.5,-1412.95,-1447.94,-1571.27,0,-34.9883,-158.322,-27.976 0|0:495:50,2,0,439:50:1950:2,0,439:81,0,17238:-1402.61,-1410.98,-1570.65,-1417.66,-1571.25,-1577.93,0,-153.667,-160.347,-28.1953 1|0:608:8,54,31,515:8:317:54,31,515:2100,1213,20208:-1805.79,-1635.63,-1645.47,-1708.47,-1562,-1725.23,-146.468,0,-72.8345,-17.5314 0|0:441:2,29,0,406:2:80:29,0,406:1140,0,15949:-1426.7,-1333.53,-1331.39,-1427.3,-1340.12,-1433.89,-115.627,-28.4086,-122.218,0 dDocent_Contig_3146 22 . T G 162863 . AB=0.853901;ABP=3502.7;AC=8;AF=0.666667;AN=12;AO=4842;CIGAR=1X;DP=5318;DPB=5318;DPRA=0;EPP=10517.3;EPPR=1021.43;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999793;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=192150;QR=18681;RO=469;RPL=0;RPP=10517.3;RPPR=1021.43;RPR=4842;RUN=1;SAF=4842;SAP=10517.3;SAR=0;SRF=469;SRP=1021.43;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:803:101,698:101:4027:698:27702:-2249.95,0,-121.618 0/1:950:145,805:145:5763:805:31930:-2584.85,0,-232.49 0/1:522:80,442:80:3187:442:17531:-1419.25,0,-129.76 0/1:942:139,802:139:5542:802:31958:-2589.6,0,-214.917 1/1:1007:0,1006:0:0:1006:40053:-3600.89,-302.836,0 1/1:1094:4,1089:4:162:1089:42976:-3848.97,-314.22,0 dDocent_Contig_3147 13 . T C 98406 . AB=0.733445;ABP=1983.04;AC=6;AF=0.5;AN=12;AO=3068;CIGAR=1X4M;DP=4183;DPB=4182.8;DPRA=0;EPP=6665.09;EPPR=2141.91;GTI=0;LEN=1;MEANALT=4.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.999674;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=123168;QR=39070;RO=985;RPL=0;RPP=6665.09;RPPR=2141.91;RPR=3068;RUN=1;SAF=3068;SAP=6665.09;SAR=0;SRF=985;SRP=2141.91;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:550:77,7,463:77:3053:7,463:283,18624:-1511.59,-1511.44,-1760.62,0,-227.95,-111.906 0|1:706:155,26,522:155:6151:26,522:1033,20978:-1681.95,-1643.57,-2142.08,0,-421.299,-349.206 0|1:509:159,12,335:159:6300:12,335:481,13407:-1056.49,-1064.73,-1579.64,0,-478.898,-417.683 0|1:623:153,0,467:153:6101:0,467:0,18752:-1499.04,-1545.1,-2047.53,0,-502.435,-361.854 0|1:754:159,15,578:159:6303:15,578:592,23229:-1866.24,-1865.39,-2379.68,0,-470.097,-344.813 0|1:1041:282,53,703:282:11162:53,703:2098,28178:-2236.5,-2148.73,-3051.39,0,-745.954,-706.998 dDocent_Contig_3148 20 . C T 24722 . AB=0.449704;ABP=29.0037;AC=6;AF=0.5;AN=12;AO=532;CIGAR=1M1X1M;DP=1183;DPB=1037.67;DPRA=0;EPP=1158.23;EPPR=443.819;GTI=0;LEN=1;MEANALT=2.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.992481;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=21328;QR=8075;RO=203;RPL=0;RPP=1158.23;RPPR=443.819;RPR=532;RUN=1;SAF=532;SAP=1158.23;SAR=0;SRF=203;SRP=443.819;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:143:0,41,102:0:0:41,102:1626,4114:-473.339,-339.513,-327.17,-134.225,0,-103.52 0|1:251:58,80,112:58:2313:80,112:3196,4487:-424.922,-179.16,-345.556,-72.7433,0,-229.507 0|1:84:15,32,37:15:595:32,37:1269,1453:-170.436,-70.5001,-109.845,-55.4727,0,-93.3109 0|1:144:15,51,78:15:601:51,78:2067,3159:-376.9,-210.971,-245.132,-120.935,0,-146.968 0|1:241:47,116,75:47:1865:116,75:4651,2988:-461.53,-92.5101,-211.114,-229.647,0,-360.593 0|1:320:68,121,128:68:2701:121,128:4819,5127:-576.296,-199.997,-385.93,-174.412,0,-358.238 dDocent_Contig_3149 165 . T A 408.341 . AB=0.380952;ABP=8.18047;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=110;DPB=110;DPRA=1.2;EPP=39.9253;EPPR=204.957;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.941176;PAIREDR=0.774194;PAO=0;PQA=0;PQR=0;PRO=0;QA=663;QR=3659;RO=93;RPL=17;RPP=39.9253;RPPR=204.957;RPR=0;RUN=1;SAF=0;SAP=39.9253;SAR=17;SRF=0;SRP=204.957;SRR=93;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:904:0:0:0,-6.92369,-81.6692 0/0:18:17,1:17:683:1:41:0,-1.32397,-57.7054 0/1:15:7,8:7:280:8:321:-24.7427,0,-21.0545 0/1:27:19,8:19:744:8:301:-19.3133,0,-59.1505 0/0:16:16,0:16:620:0:0:0,-4.81648,-56.1308 0/0:11:11,0:11:428:0:0:0,-3.31133,-38.8659 dDocent_Contig_3150 23 . C T 10875.8 . AB=0.187601;ABP=2614.72;AC=2;AF=0.166667;AN=12;AO=660;CIGAR=1X;DP=5959;DPB=5959;DPRA=1.34378;EPP=1436.18;EPPR=11385.9;GTI=0;LEN=1;MEANALT=1.6;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999618;PAO=0;PQA=0;PQR=0;PRO=0;QA=25670;QR=208259;RO=5242;RPL=0;RPP=1436.18;RPPR=11385.9;RPR=660;RUN=1;SAF=660;SAP=1436.18;SAR=0;SRF=5242;SRP=11385.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:820:745,56:745:29508:56:2198:0,-43.5077,-2455.19 0/0:772:735,0:735:29181:0:0:0,-221.257,-2623.39 0/0:556:530,25:530:21128:25:998:0,-77.3608,-1809.65 0/0:730:729,1:729:28911:1:34:0,-216.353,-2596.16 0/1:1556:1343,213:1343:53449:213:8355:-283.148,0,-4337.05 0/1:1525:1160,365:1160:46082:365:14085:-807.652,0,-3684.14 dDocent_Contig_3151 26 . A G 4831.38 . AB=0.270889;ABP=341.315;AC=3;AF=0.25;AN=12;AO=247;CIGAR=1X;DP=1421;DPB=1421;DPRA=0;EPP=539.364;EPPR=2547.98;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998294;PAO=0;PQA=0;PQR=0;PRO=0;QA=9683;QR=46314;RO=1172;RPL=0;RPP=539.364;RPPR=2547.98;RPR=247;RUN=1;SAF=247;SAP=539.364;SAR=0;SRF=1172;SRP=2547.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:203:179,24:179:7153:24:938:-23.6159,0,-582.319 0/0:220:204,15:204:8072:15:577:0,-13.7664,-673.827 0/0:210:197,13:197:7769:13:489:0,-18.877,-654.511 0/0:249:231,18:231:9046:18:716:0,-10.1917,-748.869 0/1:305:219,85:219:8666:85:3340:-209.073,0,-687.872 0/1:234:142,92:142:5608:92:3623:-255.671,0,-434.11 dDocent_Contig_3152 41 . T C 132409 . AB=0.728197;ABP=1159.56;AC=11;AF=0.916667;AN=12;AO=3572;CIGAR=1X3M;DP=4450;DPB=4450;DPRA=0;EPP=7759.51;EPPR=428.619;GTI=0;LEN=1;MEANALT=6;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.99972;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=139989;QR=7616;RO=196;RPL=0;RPP=7759.51;RPPR=428.619;RPR=3572;RUN=1;SAF=3572;SAP=7759.51;SAR=0;SRF=196;SRP=428.619;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:635:14,0,588:14:538:0,588:0,23115:-2029.8,-2034.02,-2078.18,-132.838,-177.006,0 0|1:791:80,1,678:80:3078:1,678:22,26420:-2147.19,-2169.6,-2421.98,0,-251.014,-48.5928 1|1:538:18,0,496:18:702:0,496:0,19630:-1701.67,-1707.09,-1764.79,-91.6148,-149.311,0 1|1:720:36,28,626:36:1420:28,626:1085,24347:-2061.32,-1983.03,-2091.44,-71.6072,-99.3145,0 1|1:875:23,300,547:23:895:300,547:11626,21520:-2644.68,-1696.55,-1679.79,-881.506,0,-790.393 1|1:891:25,220,637:25:983:220,637:8497,24957:-2661.41,-1971.13,-1985.76,-616.945,0,-506.048 dDocent_Contig_3153 110 . C A 219.274 . AB=0.20339;ABP=48.096;AC=3;AF=0.25;AN=12;AO=14;CIGAR=1X;DP=117;DPB=117;DPRA=1.03158;EPP=33.4109;EPPR=226.672;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.571429;PAIREDR=0.61165;PAO=0;PQA=0;PQR=0;PRO=0;QA=542;QR=4137;RO=103;RPL=0;RPP=33.4109;RPPR=226.672;RPR=14;RUN=1;SAF=0;SAP=33.4109;SAR=14;SRF=0;SRP=226.672;SRR=103;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:23,1:23:914:1:39:0,-3.32816,-78.6703 0/1:13:12,1:12:488:1:40:-0.0822893,0,-40.3581 0/1:24:21,3:21:843:3:120:-3.96297,0,-68.9588 0/1:22:14,8:14:560:8:305:-21.1845,0,-44.1202 0/0:15:14,1:14:562:1:38:0,-0.718181,-47.1263 0/0:19:19,0:19:770:0:0:0,-5.71957,-69.6201 dDocent_Contig_3154 98 . N C 62.694 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=66;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:66:-6.26831,-0.60206,0 dDocent_Contig_3155 9 . G A 83.0469 . AB=0.106383;ABP=192.76;AC=1;AF=0.0833333;AN=12;AO=50;CIGAR=1X;DP=1130;DPB=1130;DPRA=0.836697;EPP=111.584;EPPR=2348.2;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.984259;PAO=0;PQA=0;PQR=0;PRO=0;QA=1931;QR=41192;RO=1080;RPL=0;RPP=111.584;RPPR=2348.2;RPR=50;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=1080;SRP=2348.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:179:177,2:177:6764:2:78:0,-46.4809,-601.254 0/0:218:218,0:218:8341:0:0:0,-65.6245,-750.466 0/0:146:134,12:134:5044:12:462:0,-2.01912,-412.048 0/0:227:224,3:224:8586:3:116:0,-57.5161,-761.681 0/0:219:201,18:201:7654:18:698:0,-2.77153,-625.536 0/1:141:126,15:126:4803:15:577:-9.82756,0,-389.863 dDocent_Contig_3156 17 . C T 6493.79 . AB=0.568238;ABP=19.3098;AC=6;AF=0.5;AN=12;AO=229;CIGAR=1X;DP=403;DPB=403;DPRA=0;EPP=500.277;EPPR=378.675;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.720524;PAIREDR=0.624277;PAO=0;PQA=0;PQR=0;PRO=0;QA=8671;QR=6760;RO=173;RPL=0;RPP=500.277;RPPR=378.675;RPR=229;RUN=1;SAF=229;SAP=500.277;SAR=0;SRF=173;SRP=378.675;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:46:10,36:10:387:36:1334:-106.488,0,-21.3374 0/1:61:20,40:20:778:40:1553:-121.572,0,-51.8851 0/1:79:29,50:29:1145:50:1870:-144.76,0,-79.5568 0/1:67:35,32:35:1364:32:1209:-88.9293,0,-102.852 0/1:67:39,28:39:1533:28:1048:-74.4539,0,-118.059 0/1:83:40,43:40:1553:43:1657:-124.397,0,-115.027 dDocent_Contig_3157 48 . T C 60886.1 . AB=0.761236;ABP=214.034;AC=11;AF=0.916667;AN=12;AO=1852;CIGAR=1X;DP=2058;DPB=2058;DPRA=0;EPP=4015.9;EPPR=448.162;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.99892;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=73626;QR=7947;RO=205;RPL=1;RPP=4015.9;RPPR=448.162;RPR=1851;RUN=1;SAF=1852;SAP=4024.58;SAR=0;SRF=205;SRP=448.162;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:289:23,266:23:903:266:10598:-871.536,-5.422,0 1/1:338:26,312:26:1035:312:12400:-1021.69,-8.30876,0 1/1:366:22,343:22:879:343:13564:-1140.34,-30.8663,0 1/1:369:20,349:20:774:349:13873:-1177.57,-41.1033,0 1/1:340:29,311:29:1105:311:12389:-1014.39,-2.60436,0 0/1:356:85,271:85:3251:271:10802:-864.292,0,-185.567 dDocent_Contig_3158 7 . C A 107.863 . AB=0.2;ABP=26.4622;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=216;DPB=216;DPRA=0.805195;EPP=18.2106;EPPR=456.848;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.980861;PAO=0;PQA=0;PQR=0;PRO=0;QA=272;QR=8059;RO=209;RPL=0;RPP=18.2106;RPPR=456.848;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=209;SRP=456.848;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:655:0:0:0,-5.11751,-59.2855 0/0:20:20,0:20:772:0:0:0,-6.0206,-69.8085 0/0:32:31,1:31:1184:1:39:0,-5.7364,-102.957 0/1:30:24,6:24:924:6:233:-12.3092,0,-74.4461 0/0:61:61,0:61:2353:0:0:0,-18.3628,-211.979 0/0:56:56,0:56:2171:0:0:0,-16.8577,-195.61 dDocent_Contig_3159 98 . N A 4382.07 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=148;CIGAR=1M1D4M1X;DP=152;DPB=136.571;DPRA=33.1111;EPP=324.388;EPPR=0;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=295;PRO=9;QA=4857;QR=0;RO=0;RPL=148;RPP=324.388;RPPR=0;RPR=0;RUN=1;SAF=148;SAP=324.388;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:1:0,0:0:0:0:0:0,0,0 1|1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 .:.:.:.:.:.:.:. 1|1:2:0,0:0:0:0:0:0,0,0 1|1:83:0,83:0:0:83:2695:-242.464,-24.9855,0 1|1:65:0,64:0:0:64:2128:-191.44,-19.2659,0 dDocent_Contig_3160 16 . G A 954.233 . AB=0.382979;ABP=14.1911;AC=3;AF=0.25;AN=12;AO=36;CIGAR=1X;DP=166;DPB=166;DPRA=1.30556;EPP=81.1833;EPPR=285.302;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.944444;PAIREDR=0.976923;PAO=0;PQA=0;PQR=0;PRO=0;QA=1419;QR=5176;RO=130;RPL=0;RPP=81.1833;RPPR=285.302;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=130;SRP=285.302;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:13:13,0:13:521:0:0:0,-3.91339,-47.2374 0/1:63:31,32:31:1246:32:1261:-94.8029,0,-93.448 0/1:19:17,2:17:658:2:80:-1.87222,0,-53.8224 0/1:12:10,2:10:397:2:78:-3.79042,0,-32.4754 0/0:33:33,0:33:1309:0:0:0,-9.93399,-118.071 0/0:26:26,0:26:1045:0:0:0,-7.82678,-94.3427 dDocent_Contig_3161 48 . A C 353.67 . AB=0.102009;ABP=893.163;AC=2;AF=0.166667;AN=12;AO=110;CIGAR=1X;DP=2337;DPB=2337;DPRA=0.712891;EPP=233.265;EPPR=4194.8;GTI=0;LEN=1;MEANALT=1.6;MQM=60;MQMR=59.8363;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992806;PAO=0;PQA=0;PQR=0;PRO=0;QA=4335;QR=87955;RO=2224;RPL=1;RPP=233.265;RPPR=4194.8;RPR=109;RUN=1;SAF=110;SAP=241.872;SAR=0;SRF=2224;SRP=4832.36;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:320:297,22:297:11765:22:885:0,-16.4832,-977.44 0/1:435:394,40:394:15568:40:1553:-9.25384,0,-1269.23 0/1:212:185,26:185:7377:26:1030:-29.335,0,-599.93 0/0:407:387,20:387:15321:20:785:0,-51.552,-1306.81 0/0:512:512,0:512:20185:0:0:0,-154.127,-1812.42 0/0:451:449,2:449:17739:2:82:0,-127.985,-1582.63 dDocent_Contig_3162 16 . T C 88.1644 . AB=0.0941558;ABP=443.65;AC=1;AF=0.0833333;AN=12;AO=84;CIGAR=1X;DP=3343;DPB=3343;DPRA=1.13453;EPP=185.414;EPPR=7073.32;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999386;PAO=0;PQA=0;PQR=0;PRO=0;QA=3354;QR=130408;RO=3256;RPL=0;RPP=185.414;RPPR=7073.32;RPR=84;RUN=1;SAF=84;SAP=185.414;SAR=0;SRF=3256;SRP=7073.32;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:498:479,16:479:19184:16:630:0,-92.3662,-1667.91 0/0:501:501,0:501:20075:0:0:0,-150.816,-1805.02 0/1:308:279,29:279:11187:29:1142:-10.3393,0,-913.31 0/0:578:553,25:553:22088:25:1015:0,-82.3525,-1894.34 0/0:651:639,12:639:25663:12:485:0,-151.972,-2263.33 0/0:807:805,2:805:32211:2:82:0,-235.152,-2888.2 dDocent_Contig_3163 22 . C G 68.8493 . AB=0.1125;ABP=107.35;AC=1;AF=0.0833333;AN=12;AO=43;CIGAR=1X;DP=1464;DPB=1464;DPRA=1.66497;EPP=96.3836;EPPR=3086.5;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1726;QR=56842;RO=1420;RPL=0;RPP=96.3836;RPPR=3086.5;RPR=43;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=1420;SRP=3086.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:174:169,5:169:6726:5:199:0,-34.0918,-586.724 0/0:116:114,2:114:4542:2:80:0,-27.3279,-401.098 0/1:80:71,9:71:2862:9:357:-8.40781,0,-233.59 0/0:157:157,0:157:6331:0:0:0,-47.2617,-569.498 0/0:556:546,10:546:21804:10:402:0,-130.832,-1923.89 0/0:381:363,17:363:14577:17:688:0,-52.3256,-1248.51 dDocent_Contig_3164 107 . N C 207.219 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0.714286;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=206;QR=0;RO=0;RPL=0;RPP=18.2106;RPPR=0;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 1/1:2:0,2:0:0:2:53:-5.03451,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:23:-2.29991,-0.30103,0 1/1:2:0,2:0:0:2:62:-5.88849,-0.60206,0 dDocent_Contig_3165 79 . T C 52112.7 . AB=0.825243;ABP=1611.86;AC=7;AF=0.583333;AN=12;AO=1783;CIGAR=1X;DP=2103;DPB=2103;DPRA=0;EPP=3874.75;EPPR=693.539;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.996635;PAIREDR=0.996855;PAO=0;PQA=0;PQR=0;PRO=0;QA=64357;QR=10864;RO=318;RPL=1783;RPP=3874.75;RPPR=693.539;RPR=0;RUN=1;SAF=1783;SAP=3874.75;SAR=0;SRF=318;SRP=693.539;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:334:58,275:58:1984:275:9880:-788.78,0,-78.5108 1/1:352:14,338:14:486:338:12223:-1055.78,-61.8918,0 0/1:191:54,137:54:1832:137:4924:-385.79,0,-107.663 0/1:348:78,270:78:2640:270:9699:-768.051,0,-133.098 0/1:443:65,377:65:2243:377:13616:-1092.01,0,-68.9966 0/1:435:49,386:49:1679:386:14015:-1130.08,0,-20.4432 dDocent_Contig_3166 12 . G T 91204.4 . AB=0.775693;ABP=1551.14;AC=8;AF=0.666667;AN=12;AO=2811;CIGAR=1X;DP=3399;DPB=3399;DPRA=0;EPP=6107.02;EPPR=1277.66;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997154;PAIREDR=0.97615;PAO=0;PQA=0;PQR=0;PRO=0;QA=111806;QR=22998;RO=587;RPL=0;RPP=6107.02;RPPR=1277.66;RPR=2811;RUN=1;SAF=2811;SAP=6107.02;SAR=0;SRF=587;SRP=1277.66;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:619:68,551:68:2640:551:21826:-1776.19,0,-51.4037 0/1:674:205,469:205:8072:469:18686:-1477.33,0,-523.191 0/1:450:115,335:115:4536:335:13289:-1059.59,0,-272.73 0/1:602:137,464:137:5311:464:18516:-1483.89,0,-296.859 1/1:513:23,490:23:915:490:19567:-1676.74,-71.7728,0 1/1:541:39,502:39:1524:502:19922:-1653.92,-25.4466,0 dDocent_Contig_3168 28 . T A 2390.22 . AB=0.146432;ABP=1174.62;AC=3;AF=0.25;AN=12;AO=185;CIGAR=1X;DP=2264;DPB=2264;DPRA=1.03388;EPP=404.733;EPPR=4517.5;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7400;QR=83200;RO=2079;RPL=0;RPP=404.733;RPPR=4517.5;RPR=185;RUN=1;SAF=185;SAP=404.733;SAR=0;SRF=2079;SRP=4517.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:421:376,45:376:15017:45:1788:-34.3925,0,-1223.63 0/0:447:420,27:420:16796:27:1083:0,-36.8023,-1412.51 0/1:287:241,46:241:9668:46:1861:-81.2879,0,-783.097 0/1:371:304,67:304:12224:67:2668:-128.563,0,-987.56 0/0:287:287,0:287:11506:0:0:0,-86.3956,-1034.72 0/0:451:451,0:451:17989:0:0:0,-135.765,-1617.53 dDocent_Contig_3169 80 . G C 4221.9 . AB=0.139449;ABP=2747.95;AC=3;AF=0.25;AN=12;AO=341;CIGAR=1X;DP=3977;DPB=3977;DPRA=1.65841;EPP=743.482;EPPR=7894.14;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=12894;QR=136931;RO=3634;RPL=341;RPP=743.482;RPPR=7894.14;RPR=0;RUN=1;SAF=341;SAP=743.482;SAR=0;SRF=3634;SRP=7894.14;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:425:387,37:387:14536:37:1431:-1.04213,0,-1179.59 0/0:551:550,1:550:20696:1:13:0,-164.568,-1860.32 0/0:428:428,0:428:16135:0:0:0,-128.841,-1451.41 0/0:567:566,1:566:21424:1:12:0,-169.484,-1925.83 0/1:988:807,180:807:30345:180:6828:-316.91,0,-2431.8 0/1:1018:896,122:896:33795:122:4610:-108.493,0,-2733.12 dDocent_Contig_3170 46 . C A 1025.24 . AB=0.135671;ABP=759.331;AC=3;AF=0.25;AN=12;AO=108;CIGAR=1X;DP=1683;DPB=1683;DPRA=0.4375;EPP=237.529;EPPR=3392.7;GTI=0;LEN=1;MEANALT=1.8;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.990741;PAIREDR=0.992989;PAO=0;PQA=0;PQR=0;PRO=0;QA=4108;QR=60340;RO=1569;RPL=0;RPP=237.529;RPPR=3392.7;RPR=108;RUN=1;SAF=108;SAP=237.529;SAR=0;SRF=1569;SRP=3410.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:224:199,24:199:7495:24:860:-10.1939,0,-606.883 0/0:221:205,15:205:7739:15:568:0,-15.1564,-644.883 0/1:261:223,35:223:8744:35:1342:-42.9817,0,-708.464 0/1:171:140,30:140:5377:30:1175:-54.5705,0,-432.381 0/0:528:528,0:528:20388:0:0:0,-158.944,-1833.42 0/0:278:274,4:274:10597:4:163:0,-68.6279,-938.102 dDocent_Contig_3171 2 . A G 460.198 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=14;CIGAR=1I2X3M1X2M1X;DP=14;DPB=15.5556;DPRA=0;EPP=33.4109;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=500;QR=0;RO=0;RPL=0;RPP=33.4109;RPPR=0;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:6:0,6:0:0:6:214:-19.2099,-1.80618,0 1|1:4:0,4:0:0:4:142:-12.1241,-1.20412,0 1|1:1:0,1:0:0:1:36:-3.52101,-0.30103,0 1|1:1:0,1:0:0:1:36:-3.4236,-0.30103,0 1|1:1:0,1:0:0:1:36:-3.4807,-0.30103,0 1|1:1:0,1:0:0:1:36:-3.4807,-0.30103,0 dDocent_Contig_3172 78 . G T 49.104 . AB=0.117647;ABP=89.3583;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=364;DPB=364;DPRA=1.14865;EPP=20.3821;EPPR=773.883;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.616901;PAO=0;PQA=0;PQR=0;PRO=0;QA=295;QR=12729;RO=355;RPL=2;RPP=7.35324;RPPR=49.3085;RPR=6;RUN=1;SAF=2;SAP=7.35324;SAR=6;SRF=221;SRP=49.3085;SRR=134;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:75:75,0:75:2662:0:0:0,-22.5772,-239.817 0/0:76:76,0:76:2719:0:0:0,-22.8783,-244.95 0/0:37:36,0:36:1319:0:0:0,-10.8371,-118.922 0/0:47:47,0:47:1713:0:0:0,-14.1484,-154.449 0/1:68:60,8:60:2127:8:295:-6.43327,0,-171.214 0/0:61:61,0:61:2189:0:0:0,-18.3628,-197.262 dDocent_Contig_3173 115 . C G 15489.3 . AB=0.0169492;ABP=361.745;AC=0;AF=0;AN=12;AO=13;CIGAR=1M1I1X4M;DP=697;DPB=800.333;DPRA=1.68394;EPP=31.2394;EPPR=161.528;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=442;QR=2350;RO=73;RPL=0;RPP=31.2394;RPPR=161.528;RPR=13;RUN=1;SAF=0;SAP=31.2394;SAR=13;SRF=0;SRP=161.528;SRR=73;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:74:2,0,72:2:65:0,72:0,2334:-204.146,-204.748,-209.995,-16.1027,-21.6742,0 0|0:81:12,0,67:12:382:0,67:0,2092:-164.555,-168.167,-198.928,0,-30.861,-10.692 0|0:119:11,0,104:11:349:0,104:0,3300:-265.515,-268.827,-296.918,-3.19902,-31.3071,0 0|0:98:23,0,74:23:747:0,74:0,2311:-178.706,-185.63,-245.922,0,-60.2749,-37.9987 0|0:148:4,10,134:4:131:10,134:339,4296:-374.728,-348.442,-356.015,-29.7584,-12.8409,0 0|0:177:21,3,151:21:676:3,151:103,4648:-366.501,-364.458,-418.061,0,-46.2059,-9.11909 dDocent_Contig_3174 50 . T G 113.402 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=110;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 1/1:1:0,1:0:0:1:12:-1.19999,-0.30103,0 1/1:3:0,3:0:0:3:57:-5.31871,-0.90309,0 dDocent_Contig_3175 29 . A T 170.707 . AB=0.141176;ABP=98.0697;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1X;DP=424;DPB=424;DPRA=1.09398;EPP=44.2683;EPPR=882.457;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=764;QR=16102;RO=405;RPL=0;RPP=44.2683;RPPR=882.457;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=405;SRP=882.457;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:54,0:54:2145:0:0:0,-16.2556,-193.232 0/0:63:61,2:61:2433:2:81:0,-11.2792,-211.433 0/1:85:73,12:73:2843:12:487:-18.5935,0,-230.385 0/0:64:60,4:60:2411:4:155:0,-4.94413,-202.813 0/0:79:79,0:79:3177:0:0:0,-23.7814,-285.989 0/0:79:78,1:78:3093:1:41:0,-19.6868,-274.35 dDocent_Contig_3176 9 . G T 303.383 . AB=0.142857;ABP=189.137;AC=2;AF=0.166667;AN=12;AO=28;CIGAR=1X;DP=584;DPB=584;DPRA=0.877358;EPP=63.8115;EPPR=1210.35;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1082;QR=21228;RO=556;RPL=0;RPP=63.8115;RPPR=1210.35;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=556;SRP=1210.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:96:81,15:81:3107:15:578:-23.4634,0,-250.892 0/0:130:130,0:130:4946:0:0:0,-39.1339,-445.171 0/0:82:82,0:82:3122:0:0:0,-24.6845,-281.139 0/0:98:95,3:95:3630:3:116:0,-18.6832,-316.003 0/0:106:105,1:105:3989:1:39:0,-28.0126,-355.209 0/1:72:63,9:63:2434:9:349:-10.0967,0,-197.588 dDocent_Contig_3177 19 . T C 2259.86 . AB=0.208661;ABP=377.529;AC=2;AF=0.166667;AN=12;AO=152;CIGAR=1X;DP=1488;DPB=1488;DPRA=0;EPP=333.074;EPPR=2901.93;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.994007;PAO=0;PQA=0;PQR=0;PRO=0;QA=6103;QR=53362;RO=1335;RPL=0;RPP=333.074;RPPR=2901.93;RPR=152;RUN=1;SAF=152;SAP=333.074;SAR=0;SRF=1335;SRP=2901.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:186:148,38:148:5853:38:1518:-80.8659,0,-470.567 0/0:286:264,21:264:10570:21:847:0,-9.6435,-874.046 0/0:95:90,5:90:3590:5:199:0,-10.3104,-304.835 0/1:322:254,68:254:10141:68:2724:-148.342,0,-815.086 0/0:271:268,3:268:10696:3:123:0,-70.1143,-950.432 0/0:328:311,17:311:12512:17:692:0,-36.13,-1062.52 dDocent_Contig_3178 67 . G C 391.186 . AB=0.178808;ABP=138.317;AC=2;AF=0.166667;AN=12;AO=33;CIGAR=1X;DP=453;DPB=453;DPRA=0.951923;EPP=74.6689;EPPR=908.514;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.424242;PAIREDR=0.618705;PAO=0;PQA=0;PQR=0;PRO=0;QA=1165;QR=15236;RO=417;RPL=15;RPP=3.60252;RPPR=11.7639;RPR=18;RUN=1;SAF=15;SAP=3.60252;SAR=18;SRF=229;SRP=11.7639;SRR=188;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:77:77,0:77:2848:0:0:0,-23.1793,-256.51 0/0:81:79,2:79:2899:2:72:0,-17.5491,-254.274 0/0:79:79,0:79:2883:0:0:0,-23.7814,-259.66 0/0:65:61,4:61:2228:4:131:0,-7.45769,-188.651 0/1:71:50,18:50:1801:18:638:-36.9242,0,-141.544 0/1:80:71,9:71:2577:9:324:-5.41622,0,-208.062 dDocent_Contig_3179 106 . N A 3211.34 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=103;CIGAR=2X;DP=104;DPB=104;DPRA=0;EPP=226.672;EPPR=0;GTI=0;LEN=1;MEANALT=1.2;MQM=47.0194;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3577;QR=0;RO=0;RPL=0;RPP=226.672;RPPR=0;RPR=103;RUN=1;SAF=0;SAP=226.672;SAR=103;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:7:0,6:0:0:6:212:-19.3061,-1.80618,0 1|1:49:0,49:0:0:49:1686:-150.526,-14.7505,0 1|1:37:0,37:0:0:37:1293:-115.509,-11.1381,0 1|1:7:0,7:0:0:7:244:-22.0967,-2.10721,0 .:.:.:.:.:.:.:. 1|1:4:0,4:0:0:4:142:-12.997,-1.20412,0 dDocent_Contig_3180 70 . T C 250.521 . AB=0.186813;ABP=80.539;AC=1;AF=0.0833333;AN=12;AO=28;CIGAR=1X;DP=522;DPB=522;DPRA=0.851064;EPP=63.8115;EPPR=1075.72;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.642857;PAIREDR=0.487854;PAO=0;PQA=0;PQR=0;PRO=0;QA=977;QR=16826;RO=494;RPL=10;RPP=7.97367;RPPR=52.4003;RPR=18;RUN=1;SAF=10;SAP=7.97367;SAR=18;SRF=300;SRP=52.4003;SRR=194;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:94:94,0:94:3192:0:0:0,-28.2968,-287.51 0/1:91:74,17:74:2447:17:596:-26.575,0,-193.091 0/0:49:47,2:47:1600:2:71:0,-8.00857,-137.547 0/0:100:91,9:91:3147:9:310:0,-1.86894,-255.232 0/0:118:118,0:118:4043:0:0:0,-35.5215,-364.065 0/0:70:70,0:70:2397:0:0:0,-21.0721,-215.988 dDocent_Contig_3181 8 . T A 89.3442 . AB=0.111111;ABP=180.347;AC=1;AF=0.0833333;AN=12;AO=30;CIGAR=1X;DP=1199;DPB=1199;DPRA=1.2227;EPP=68.1545;EPPR=2404.39;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.929;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.919589;PAO=0;PQA=0;PQR=0;PRO=0;QA=1138;QR=44822;RO=1169;RPL=0;RPP=68.1545;RPPR=2541.46;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=1153;SRP=2404.39;SRR=16;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:230:229,1:229:8791:1:39:0,-65.3403,-787.032 0/0:231:220,11:220:8468:11:422:0,-31.2048,-723.269 0/1:135:120,15:120:4615:15:564:-10.4573,0,-374.752 0/0:255:252,3:252:9644:3:113:0,-66.2237,-857.105 0/0:226:226,0:226:8668:0:0:0,-68.0328,-779.861 0/0:122:122,0:122:4636:0:0:0,-36.7257,-417.233 dDocent_Contig_3182 43 . G A 10784.9 . AB=0.407249;ABP=73.0993;AC=2;AF=0.166667;AN=12;AO=389;CIGAR=1X;DP=1668;DPB=1668;DPRA=2.13534;EPP=847.713;EPPR=2778.15;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=15447;QR=50521;RO=1278;RPL=0;RPP=847.713;RPPR=2778.15;RPR=389;RUN=1;SAF=389;SAP=847.713;SAR=0;SRF=1278;SRP=2778.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:225:225,0:225:8838:0:0:0,-67.7317,-794.938 0/0:198:191,7:191:7585:7:284:0,-33.6699,-656.345 0/0:149:149,0:149:5883:0:0:0,-44.8535,-529.278 0/0:158:158,0:158:6236:0:0:0,-47.5627,-561.001 0/1:536:373,163:373:14763:163:6460:-419.791,0,-1166.22 0/1:402:182,219:182:7216:219:8703:-661.919,0,-528.237 dDocent_Contig_3183 7 . G C 115672 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=3501;CIGAR=1X;DP=3680;DPB=3680;DPRA=0;EPP=7605.34;EPPR=376.504;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.989717;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=133942;QR=5329;RO=172;RPL=0;RPP=7605.34;RPPR=376.504;RPR=3501;RUN=1;SAF=3501;SAP=7605.34;SAR=0;SRF=172;SRP=376.504;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:528:40,488:40:1277:488:18715:-1568.18,-43.7575,0 1/1:653:57,593:57:1814:593:22681:-1876.53,-32.3683,0 1/1:516:21,495:21:620:495:18966:-1649.87,-99.2614,0 1/1:504:43,458:43:1249:458:17523:-1463.54,-38.2804,0 1/1:829:0,829:0:0:829:31713:-2852.25,-249.554,0 1/1:650:11,638:11:369:638:24344:-2156.06,-162.115,0 dDocent_Contig_3184 36 . T C 42705.8 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=1248;CIGAR=1X;DP=1303;DPB=1303;DPRA=0;EPP=2713.01;EPPR=122.441;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.996795;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=49675;QR=2183;RO=55;RPL=0;RPP=2713.01;RPPR=122.441;RPR=1248;RUN=1;SAF=1248;SAP=2713.01;SAR=0;SRF=55;SRP=122.441;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:153:9,144:9:356:144:5713:-481.59,-13.6564,0 1/1:260:18,242:18:715:242:9668:-804.841,-13.5903,0 1/1:213:4,209:4:162:209:8251:-727.195,-49.1524,0 1/1:179:5,174:5:197:174:6930:-605.274,-35.778,0 1/1:259:0,259:0:0:259:10331:-929.118,-77.9668,0 1/1:239:19,220:19:753:220:8782:-721.782,-3.8552,0 dDocent_Contig_3185 33 . T G 21140.4 . AB=0.672862;ABP=142.646;AC=8;AF=0.666667;AN=12;AO=636;CIGAR=9M1X4M;DP=836;DPB=850.643;DPRA=0;EPP=1384.07;EPPR=176.728;GTI=0;LEN=1;MEANALT=4.16667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.998428;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=24232;QR=3132;RO=80;RPL=0;RPP=1384.07;RPPR=176.728;RPR=636;RUN=1;SAF=636;SAP=1384.07;SAR=0;SRF=80;SRP=176.728;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:114:29,12,8,64:29:1132:12,8,64:474,291,2432:-190.692,-160.418,-249.866,-175.658,-229.714,-266.309,0,-54.0586,-69.3012,-73.797 0|1:145:12,29,2,101:12:476:29,2,101:1138,64,3835:-365.24,-275.265,-305.721,-363.696,-309.295,-402.279,-54.4014,0,-88.4345,-63.1837 0|1:207:24,0,33,146:24:933:0,33,146:0,1194,5655:-478.102,-485.327,-561.998,-387.883,-464.553,-454.619,-20.7583,-97.442,0,-53.4916 0|1:72:15,0,5,51:15:591:0,5,51:0,168,1937:-154.368,-158.884,-207.511,-145.281,-193.907,-192.402,0,-48.6787,-35.0834,-33.3262 1|1:129:0,0,5,123:0:0:0,5,123:0,171,4624:-415.847,-415.847,-415.847,-401.973,-401.973,-400.468,-37.0267,-37.0267,-23.1584,0 1|1:169:0,4,12,151:0:0:4,12,151:157,390,5749:-517.009,-504.096,-502.892,-485.544,-472.631,-481.931,-45.4555,-32.5292,-14.0209,0 dDocent_Contig_3186 22 . A T 9041.01 . AB=0.359033;ABP=153.002;AC=4;AF=0.333333;AN=12;AO=312;CIGAR=2X2M1X4M;DP=869;DPB=868.667;DPRA=0;EPP=671.852;EPPR=763.026;GTI=0;LEN=1;MEANALT=6.33333;MQM=55.1218;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.971154;PAIREDR=0.991429;PAO=0;PQA=0;PQR=0;PRO=0;QA=12123;QR=13534;RO=350;RPL=0;RPP=680.51;RPPR=763.026;RPR=312;RUN=1;SAF=311;SAP=671.852;SAR=1;SRF=350;SRP=763.026;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:101:41,6,36,14:41:1576:6,36,14:230,1386,569:-101.223,-94.6896,-222.256,0,-110.494,-118.533,-66.6276,-177.127,-82.433,-191.789 0|0:93:45,8,15,18:45:1714:8,15,18:316,584,715:-45.318,-32.8592,-171.029,-10.9706,-125.542,-147.032,0,-114.574,-92.6845,-135.161 0|0:237:112,2,56,62:112:4335:2,56,62:77,2210,2499:-172.271,-199.664,-555.135,-24.4299,-374.179,-363.644,0,-349.755,-174.517,-337.413 0|1:117:30,3,46,29:30:1167:3,46,29:118,1810,1154:-138.712,-138.036,-233.035,0,-86.1944,-82.0539,-52.7232,-138.919,-0.880494,-139.896 0|1:188:61,9,104,12:61:2363:9,104,12:335,3972,484:-300.282,-291.225,-482.633,0,-166.696,-162.806,-278.745,-445.444,-154.214,-469.251 0|1:133:61,3,55,10:61:2379:3,55,10:118,2161,380:-157.509,-166.166,-360.813,0,-185.848,-178.998,-144.721,-330.565,-164.404,-337.261 dDocent_Contig_3187 7 . C A 486.202 . AB=0.177914;ABP=149.884;AC=1;AF=0.0833333;AN=12;AO=60;CIGAR=1X;DP=1133;DPB=1133;DPRA=0.948849;EPP=133.299;EPPR=2333;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999068;PAO=0;PQA=0;PQR=0;PRO=0;QA=2263;QR=41165;RO=1073;RPL=0;RPP=133.299;RPPR=2333;RPR=60;RUN=1;SAF=60;SAP=133.299;SAR=0;SRF=1073;SRP=2333;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:178:177,1:177:6827:1:19:0,-51.6834,-612.407 0/0:251:230,21:230:8792:21:801:0,-3.14542,-718.609 0/1:163:134,29:134:5152:29:1099:-50.1431,0,-414.616 0/0:150:141,9:141:5413:9:344:0,-13.8366,-455.836 0/0:214:214,0:214:8230:0:0:0,-64.4204,-740.468 0/0:177:177,0:177:6751:0:0:0,-53.2823,-607.484 dDocent_Contig_3188 74 . A C 8639.97 . AB=0.851562;ABP=140.424;AC=5;AF=0.416667;AN=12;AO=228;CIGAR=1M1D1M1X11M1X3M1X7M1X;DP=314;DPB=374.571;DPRA=2.74317;EPP=498.106;EPPR=0;GTI=0;LEN=1;MEANALT=3.33333;MQM=60;MQMR=0;NS=6;NUMALT=5;ODDS=0;PAIRED=1;PAIREDR=0;PAO=450.833;PQA=17108.8;PQR=854.083;PRO=26.3333;QA=7515;QR=0;RO=0;RPL=228;RPP=498.106;RPPR=0;RPR=0;RUN=1;SAF=228;SAP=498.106;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:1:0,0,0,1,0,0:0:0:0,0,1,0,0:0,0,17,0,0:-1.52618,-1.52618,-1.52618,-1.52618,-1.52618,-1.52618,-0.30103,-0.30103,-0.30103,0,-1.52618,-1.52618,-1.52618,-0.30103,-1.52618,-1.52618,-1.52618,-1.52618,-0.30103,-1.52618,-1.52618 0|0:60:0,0,0,0,0,59:0:0:0,0,0,0,59:0,0,0,0,1946:-175.052,-175.052,-175.052,-175.052,-175.052,-175.052,-175.052,-175.052,-175.052,-175.052,-175.052,-175.052,-175.052,-175.052,-175.052,-17.7608,-17.7608,-17.7608,-17.7608,-17.7608,0 0|0:1:0,1,0,0,0,0:0:0:1,0,0,0,0:35,0,0,0,0:-3.14352,-0.30103,0,-3.14352,-0.30103,-3.14352,-3.14352,-0.30103,-3.14352,-3.14352,-3.14352,-0.30103,-3.14352,-3.14352,-3.14352,-3.14352,-0.30103,-3.14352,-3.14352,-3.14352,-3.14352 0|0:2:0,1,1,0,0,0:0:0:1,1,0,0,0:35,32,0,0,0:-5.42436,-2.57722,-2.27619,-2.84711,0,-2.54608,-5.42436,-2.57722,-2.84711,-5.42436,-5.42436,-2.57722,-2.84711,-5.42436,-5.42436,-5.42436,-2.57722,-2.84711,-5.42436,-5.42436,-5.42436 1|1:122:0,0,0,118,0,0:0:0:0,0,118,0,0:0,0,3914,0,0:-352.133,-352.133,-352.133,-352.133,-352.133,-352.133,-35.5215,-35.5215,-35.5215,0,-352.133,-352.133,-352.133,-35.5215,-352.133,-352.133,-352.133,-352.133,-35.5215,-352.133,-352.133 1|0:128:0,0,0,109,16,0:0:0:0,0,109,16,0:0,0,3584,501,0:-329.871,-329.871,-329.871,-329.871,-329.871,-329.871,-40.2469,-40.2469,-40.2469,-7.4346,-289.613,-289.613,-289.613,0,-284.797,-329.871,-329.871,-329.871,-40.2469,-289.613,-329.871 dDocent_Contig_3189 50 . A C 28706.7 . AB=0.239938;ABP=3053.61;AC=6;AF=0.5;AN=12;AO=1246;CIGAR=1X;DP=5193;DPB=5193;DPRA=0;EPP=2699.99;EPPR=8567.3;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999197;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=49417;QR=155545;RO=3944;RPL=1245;RPP=2699.99;RPPR=8567.3;RPR=1;RUN=1;SAF=1246;SAP=2708.66;SAR=0;SRF=3944;SRP=8567.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:718:588,128:588:23248:128:5060:-239.361,0,-1874.45 0/1:944:810,134:810:31931:134:5275:-190.444,0,-2586.87 0/1:481:371,110:371:14598:110:4352:-246.833,0,-1167.99 0/1:750:558,191:558:22092:191:7510:-449.822,0,-1760.77 0/1:1101:720,381:720:28395:381:15207:-1036.04,0,-2221.74 0/1:1199:897,302:897:35281:302:12013:-719.398,0,-2811.24 dDocent_Contig_3190 45 . C T 74.792 . AB=0.123077;ABP=83.2212;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=205;DPB=205;DPRA=0.928571;EPP=20.3821;EPPR=430.79;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0.522843;PAO=0;PQA=0;PQR=0;PRO=0;QA=327;QR=7848;RO=197;RPL=0;RPP=20.3821;RPPR=430.79;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=197;SRP=430.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:17,2:17:669:2:82:-2.06011,0,-54.8198 0/1:46:40,6:40:1581:6:245:-8.58209,0,-128.676 0/0:27:27,0:27:1089:0:0:0,-8.12781,-98.2957 0/0:38:38,0:38:1508:0:0:0,-11.4391,-135.954 0/0:41:41,0:41:1624:0:0:0,-12.3422,-146.388 0/0:34:34,0:34:1377:0:0:0,-10.235,-124.183 dDocent_Contig_3191 50 . C A 43.5899 . AB=0.106383;ABP=129.51;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=1008;DPB=1008;DPRA=0.742857;EPP=26.8965;EPPR=2165.8;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998996;PAO=0;PQA=0;PQR=0;PRO=0;QA=385;QR=39390;RO=996;RPL=11;RPP=26.8965;RPPR=2165.8;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=996;SRP=2165.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:181:180,0:180:7109:0:0:0,-54.1854,-639.406 0/0:221:221,0:221:8695:0:0:0,-66.5276,-782.085 0/0:234:234,0:234:9242:0:0:0,-70.441,-831.255 0/0:179:178,1:178:7056:1:9:0,-52.9844,-633.82 0/1:94:84,10:84:3333:10:376:-5.88185,0,-271.734 0/0:99:99,0:99:3955:0:0:0,-29.802,-355.936 dDocent_Contig_3192 43 . G A 96756.7 . AB=0.844403;ABP=1678.22;AC=9;AF=0.75;AN=12;AO=2952;CIGAR=1X;DP=3285;DPB=3285;DPRA=0;EPP=6413.2;EPPR=710.91;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=116170;QR=12728;RO=326;RPL=0;RPP=6413.2;RPPR=710.91;RPR=2952;RUN=1;SAF=2952;SAP=6413.2;SAR=0;SRF=326;SRP=710.91;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:469:33,435:33:1309:435:17161:-1425.12,-23.2009,0 1/1:609:18,591:18:713:591:23237:-2024.98,-118.835,0 1/1:581:27,553:27:1048:553:21907:-1875.23,-80.0929,0 0/1:522:62,459:62:2433:459:18004:-1462.1,0,-62.195 0/1:619:140,479:140:5410:479:18905:-1513.67,0,-300.443 0/1:485:46,435:46:1815:435:16956:-1379.8,0,-18.558 dDocent_Contig_3193 27 . A G 1666.91 . AB=0.212534;ABP=266.433;AC=3;AF=0.25;AN=12;AO=91;CIGAR=1X;DP=899;DPB=899;DPRA=0;EPP=200.614;EPPR=1757.56;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3648;QR=32262;RO=808;RPL=0;RPP=200.614;RPPR=1757.56;RPR=91;RUN=1;SAF=91;SAP=200.614;SAR=0;SRF=808;SRP=1757.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:138:97,41:97:3866:41:1648:-107.006,0,-306.401 0/0:167:158,9:158:6295:9:363:0,-17.2377,-533.266 0/1:78:70,8:70:2801:8:318:-5.50599,0,-228.715 0/1:151:122,29:122:4858:29:1162:-59.4013,0,-391.662 0/0:183:182,1:182:7283:1:41:0,-50.9939,-651.017 0/0:182:179,3:179:7159:3:116:0,-43.9701,-633.143 dDocent_Contig_3194 13 . T C 47516.2 . AB=0.540185;ABP=42.452;AC=6;AF=0.5;AN=12;AO=1519;CIGAR=1X3M;DP=2812;DPB=2812;DPRA=0;EPP=3301.48;EPPR=2007.28;GTI=0;LEN=1;MEANALT=4.83333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.999342;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=61161;QR=35974;RO=923;RPL=0;RPP=3301.48;RPPR=2007.28;RPR=1519;RUN=1;SAF=1519;SAP=3301.48;SAR=0;SRF=923;SRP=2007.28;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:450:149,0,58,242:149:5812:0,58,242:0,2304,9772:-760.717,-805.57,-1283.3,-615.907,-1093.63,-1076.17,0,-477.725,-288.058,-404.876 0|1:509:171,18,7,311:171:6692:18,7,311:704,275,12505:-979.015,-972.608,-1517.41,-1007.87,-1500.21,-1555.99,0,-492.343,-527.609,-456.606 0|1:300:89,6,16,180:89:3442:6,16,180:227,635,7247:-570.486,-578.672,-859.55,-545.007,-809.086,-822.875,0,-264.079,-230.413,-228.5 0|1:450:145,7,7,285:145:5647:7,7,285:274,273,11476:-902.172,-923.292,-1385.27,-923.384,-1364.94,-1385.37,0,-441.562,-441.655,-378.299 0|1:572:188,69,0,310:188:7313:69,0,310:2701,0,12490:-972.852,-807.36,-1387.53,-1029.45,-1408.3,-1630.39,0,-378.861,-600.95,-507.631 0|1:531:181,157,0,191:181:7068:157,0,191:6116,0,7671:-577.601,-129.419,-663.163,-632.088,-710.425,-1213.1,0,-78.3379,-581.011,-523.515 dDocent_Contig_3195 19 . C A 91824 . AB=0.135874;ABP=4385.01;AC=0;AF=0;AN=12;AO=542;CIGAR=7M1X2M;DP=4674;DPB=2168;DPRA=0;EPP=1179.95;EPPR=2078.94;GTI=0;LEN=1;MEANALT=7.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=21489;QR=37300;RO=956;RPL=0;RPP=1179.95;RPPR=2078.94;RPR=542;RUN=1;SAF=542;SAP=1179.95;SAR=0;SRF=956;SRP=2078.94;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:883:201,507,167:201:7787:507,167:18384,6629:-1440.29,0,-487.05,-955.123,-93.9965,-1544.53 0|0:969:241,615,101:241:9386:615,101:22406,4025:-1757.48,0,-586.25,-1498.58,-439.944,-2239.57 0|0:554:135,347,68:135:5308:347,68:12553,2707:-983.885,0,-332.142,-801.633,-213.713,-1217.77 0|0:764:205,378,176:205:8021:378,176:13721,6951:-1058.54,0,-545.688,-548.341,-87.5742,-1154.85 0|0:869:26,814,25:26:1017:814,25:29783,979:-2587.16,-161.421,0,-2514.49,-164.543,-2590.58 0|0:635:148,474,5:148:5781:474,5:17251,198:-1364.27,0,-332.565,-1392.52,-458.956,-1866.26 dDocent_Contig_3196 27 . T A 1686.63 . AB=0.115385;ABP=1940.63;AC=2;AF=0.166667;AN=12;AO=333;CIGAR=1X;DP=4297;DPB=4297;DPRA=0;EPP=726.111;EPPR=8606.38;GTI=0;LEN=1;MEANALT=1.33333;MQM=55.6937;MQMR=59.3884;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999495;PAO=0;PQA=0;PQR=0;PRO=0;QA=13308;QR=157489;RO=3962;RPL=0;RPP=726.111;RPPR=8606.38;RPR=333;RUN=1;SAF=333;SAP=726.111;SAR=0;SRF=3962;SRP=8606.38;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:558:528,30:528:21065:30:1191:0,-60.7982,-1785.86 0/0:739:704,35:704:28083:35:1407:0,-95.7679,-2388.69 0/1:802:692,109:692:27596:109:4373:-151.086,0,-2236.22 0/0:631:600,31:600:23777:31:1216:0,-80.8282,-2027.65 0/0:861:797,63:797:31603:63:2524:0,-32.4389,-2612.44 0/1:706:641,65:641:25365:65:2597:-20.7988,0,-2066.66 dDocent_Contig_3197 11 . T C 21821.4 . AB=0.606742;ABP=117.513;AC=6;AF=0.5;AN=12;AO=702;CIGAR=1X;DP=1157;DPB=1157;DPRA=0;EPP=1527.38;EPPR=988.859;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=28249;QR=18273;RO=454;RPL=0;RPP=1527.38;RPPR=988.859;RPR=702;RUN=1;SAF=702;SAP=1527.38;SAR=0;SRF=454;SRP=988.859;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:210:91,119:91:3666:119:4787:-367.497,0,-266.732 0/1:201:65,136:65:2597:136:5473:-431.864,0,-173.337 0/1:216:98,117:98:3925:117:4726:-360.096,0,-288.095 0/1:210:94,116:94:3814:116:4665:-356.529,0,-280.02 0/1:181:56,125:56:2256:125:5013:-396.549,0,-148.714 0/1:139:50,89:50:2015:89:3585:-280.825,0,-139.686 dDocent_Contig_3198 29 . C A 468.38 . AB=0.163043;ABP=184.47;AC=3;AF=0.25;AN=12;AO=38;CIGAR=1X;DP=359;DPB=359;DPRA=1.39556;EPP=85.5263;EPPR=691.394;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.973684;PAIREDR=0.987539;PAO=0;PQA=0;PQR=0;PRO=0;QA=1475;QR=12516;RO=321;RPL=0;RPP=85.5263;RPPR=700.053;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=320;SRP=691.394;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:70:65,5:65:2561:5:187:0,-3.88373,-213.433 0/0:60:57,3:57:2206:3:106:0,-8.17327,-188.827 0/1:84:67,17:67:2581:17:666:-34.9794,0,-207.154 0/1:54:48,6:48:1925:6:243:-5.99256,0,-157.193 0/0:45:45,0:45:1740:0:0:0,-13.5463,-156.818 0/1:46:39,7:39:1503:7:273:-11.0879,0,-121.675 dDocent_Contig_3199 33 . G C 19759.9 . AB=0.114597;ABP=3909.62;AC=3;AF=0.25;AN=12;AO=347;CIGAR=2M1X1M;DP=3028;DPB=3353;DPRA=0;EPP=756.511;EPPR=4398.07;GTI=0;LEN=1;MEANALT=3.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13898;QR=78799;RO=2024;RPL=0;RPP=756.511;RPPR=4398.07;RPR=347;RUN=1;SAF=347;SAP=756.511;SAR=0;SRF=2024;SRP=4398.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:189:164,8,17:164:6311:8,17:288,691:-7.65766,-33.546,-549.219,0,-494.63,-513.007 0|1:492:310,9,172:310:12037:9,172:347,6848:-470.559,-535.385,-1521.66,0,-960.523,-937.24 0|1:151:138,0,13:138:5388:0,13:0,528:-2.41136,-43.9535,-486.85,0,-443.301,-439.388 0|0:356:316,37,2:316:12255:37,2:1369,80:-16.8381,0,-995.651,-105.372,-1000.2,-1111.57 0|0:942:604,306,28:604:23584:306,28:11388,1109:-750.133,0,-1846.57,-840.68,-1847.41,-2770.94 0|0:898:492,288,115:492:19224:288,115:10836,4642:-739.59,0,-1493.65,-505.032,-1197.69,-2050.78 dDocent_Contig_3200 9 . C A 1620.95 . AB=0.0859107;ABP=436.417;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=2M1X3M1X4M;DP=325;DPB=319.364;DPRA=0;EPP=57.2971;EPPR=333.074;GTI=0;LEN=1;MEANALT=6;MQM=59.84;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=964;QR=5874;RO=152;RPL=0;RPP=57.2971;RPPR=333.074;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=152;SRP=333.074;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:73:26,4,7,13,16:26:990:4,7,13,16:130,263,516,650:-44.7166,-43.1355,-123.145,-30.9955,-102.805,-110.107,-19.9241,-91.7287,-79.5924,-97.2228,0,-71.8219,-59.6839,-48.6087,-76.4142 0|0:54:16,4,4,14,14:16:618:4,4,14,14:87,156,539,554:-39.5472,-38.8068,-88.3701,-31.5341,-76.7488,-81.105,-7.55231,-52.772,-45.5006,-54.1127,0,-45.2313,-37.9599,-13.9785,-46.5743 0|0:34:23,1,0,4,5:23:898:1,0,4,5:37,0,159,201:-9.67991,-13.8464,-87.3954,-16.6036,-87.6964,-90.4534,-6.87388,-77.9516,-80.7081,-79.5039,0,-71.1326,-73.8895,-64.1454,-72.3844 0|0:71:39,0,3,8,14:39:1493:0,3,8,14:0,115,318,567:-35.0674,-46.8075,-169.352,-37.3642,-159.912,-159.009,-30.275,-152.808,-143.369,-150.399,0,-122.587,-113.147,-106.045,-118.373 0|1:50:34,2,6,2,5:34:1327:2,6,2,5:60,231,80,181:-8.74422,-14.7347,-123.235,0,-104.876,-107.322,-14.1008,-118.955,-104.246,-122.605,-4.21014,-109.074,-94.3645,-108.444,-111.82 0|0:43:14,7,5,4,12:14:548:7,5,4,12:230,199,158,483:-35.5614,-23.0932,-66.0579,-23.3793,-51.7749,-66.9544,-29.1324,-57.5243,-57.8166,-73.0035,0,-28.4121,-28.7003,-34.4525,-41.4839 dDocent_Contig_3201 107 . N T 570.393 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=19;CIGAR=1X;DP=19;DPB=19;DPRA=0;EPP=44.2683;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=624;QR=0;RO=0;RPL=0;RPP=44.2683;RPPR=0;RPR=19;RUN=1;SAF=0;SAP=44.2683;SAR=19;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:77:-7.18411,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:16:0,16:0:0:16:547:-49.5539,-4.81648,0 ./.:.:.:.:.:.:.:. dDocent_Contig_3202 15 . T G 63.2395 . AB=0.178571;ABP=28.1373;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=188;DPB=188;DPRA=1.41026;EPP=22.5536;EPPR=391.704;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.555556;PAIREDR=0.865922;PAO=0;PQA=0;PQR=0;PRO=0;QA=336;QR=6669;RO=179;RPL=0;RPP=22.5536;RPPR=391.704;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=179;SRP=391.704;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1014:0:0:0,-8.12781,-91.5621 0/0:56:54,2:54:2018:2:78:0,-9.4549,-174.451 0/0:15:15,0:15:550:0:0:0,-4.51545,-49.8284 0/1:28:23,5:23:872:5:177:-7.8463,0,-70.3692 0/0:36:36,0:36:1325:0:0:0,-10.8371,-119.53 0/0:26:24,2:24:890:2:81:0,-0.141046,-72.7274 dDocent_Contig_3203 66 . T G 125686 . AB=0.728416;ABP=795.618;AC=10;AF=0.833333;AN=12;AO=3892;CIGAR=1X;DP=4486;DPB=4486;DPRA=0;EPP=8454.38;EPPR=1279.84;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999486;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=150310;QR=23298;RO=588;RPL=3892;RPP=8454.38;RPPR=1279.84;RPR=0;RUN=1;SAF=3892;SAP=8454.38;SAR=0;SRF=588;SRP=1279.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:702:33,669:33:1309:669:25893:-2210.25,-93.2502,0 1/1:830:29,801:29:1147:801:31019:-2685.67,-146.345,0 1/1:494:14,479:14:569:479:17761:-1546,-96.957,0 1/1:711:41,669:41:1617:669:25862:-2179.79,-68.1592,0 0/1:925:231,694:231:9169:694:27078:-2156.37,0,-546.22 0/1:824:240,580:240:9487:580:22697:-1793.72,0,-606.03 dDocent_Contig_3204 9 . C T 789.083 . AB=0.15051;ABP=418.892;AC=4;AF=0.333333;AN=12;AO=66;CIGAR=1X;DP=549;DPB=549;DPRA=0;EPP=146.327;EPPR=1051.83;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.939394;PAIREDR=0.956522;PAO=0;PQA=0;PQR=0;PRO=0;QA=2520;QR=18634;RO=483;RPL=0;RPP=146.327;RPPR=1051.83;RPR=66;RUN=1;SAF=66;SAP=146.327;SAR=0;SRF=483;SRP=1051.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:72:70,2:70:2695:2:72:0,-14.8382,-235.895 0/1:137:124,13:124:4770:13:503:-4.3777,0,-388.085 0/0:85:80,5:80:3095:5:195:0,-7.66335,-260.775 0/1:63:51,12:51:1976:12:463:-23.056,0,-159.11 0/1:92:81,11:81:3131:11:413:-9.82156,0,-254.245 0/1:100:77,23:77:2967:23:874:-48.8745,0,-237.092 dDocent_Contig_3205 9 . C G 553.051 . AB=0.123007;ABP=544.944;AC=1;AF=0.0833333;AN=12;AO=77;CIGAR=1X;DP=2102;DPB=2102;DPRA=1.23855;EPP=170.214;EPPR=4361.16;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=59.995;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990533;PAO=0;PQA=0;PQR=0;PRO=0;QA=2899;QR=77140;RO=2007;RPL=0;RPP=170.214;RPPR=4361.16;RPR=77;RUN=1;SAF=77;SAP=170.214;SAR=0;SRF=2007;SRP=4361.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:291:290,0:290:11171:0:0:0,-87.2987,-1004.56 0/0:334:334,0:334:12858:0:0:0,-100.544,-1156.65 0/0:314:309,0:309:11819:0:0:0,-93.0183,-1062.83 0/0:299:298,1:298:11489:1:10:0,-89.008,-1032.54 0/1:439:375,54:375:14402:54:2068:-56.828,0,-1165.97 0/0:425:401,22:401:15401:22:821:0,-53.5219,-1311.1 dDocent_Contig_3206 107 . N C 114.863 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=111;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:2:0,2:0:0:2:45:-4.27417,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:20:-1.99996,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:11:-1.09999,-0.30103,0 dDocent_Contig_3207 31 . A G 2517.72 . AB=0.0482759;ABP=260.008;AC=6;AF=0.5;AN=12;AO=7;CIGAR=1X3M;DP=351;DPB=351;DPRA=0;EPP=18.2106;EPPR=519.821;GTI=0;LEN=1;MEANALT=2;MQM=51;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=0.142857;PAIREDR=0.735294;PAO=0;PQA=0;PQR=0;PRO=0;QA=279;QR=9340;RO=238;RPL=0;RPP=18.2106;RPPR=519.821;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=238;SRP=519.821;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:56:35,19,2:35:1380:19,2:731,78:-48.4019,0,-107.827,-52.5681,-107.178,-165.517 0|1:71:44,23,4:44:1730:23,4:909,161:-61.5534,0,-135.372,-61.6391,-129.136,-202.735 0|1:18:12,5,1:12:458:5,1:200,40:-12.8649,0,-36.0445,-13.2086,-34.2793,-50.4585 0|1:53:43,10,0:43:1714:10,0:392,0:-19.6826,0,-138.537,-32.6269,-141.548,-173.782 0|1:67:41,25,0:41:1585:25,0:979,0:-68.448,0,-122.945,-80.7903,-130.47,-210.966 0|1:86:63,22,0:63:2473:22,0:863,0:-52.0434,0,-196.804,-71.0083,-203.427,-274.395 dDocent_Contig_3208 40 . G A 5820.21 . AB=0.223368;ABP=776.711;AC=2;AF=0.166667;AN=12;AO=350;CIGAR=1X;DP=3405;DPB=3405;DPRA=1.63065;EPP=763.026;EPPR=6632.52;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13929;QR=122192;RO=3053;RPL=0;RPP=763.026;RPPR=6632.52;RPR=350;RUN=1;SAF=350;SAP=763.026;SAR=0;SRF=3053;SRP=6632.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:618:600,18:600:24005:18:724:0,-120.552,-2092.85 0/0:635:588,46:588:23505:46:1758:0,-32.8159,-1954.92 0/0:372:372,0:372:14936:0:0:0,-111.983,-1343.04 0/0:616:590,26:590:23561:26:1049:0,-90.7333,-2023.73 0/1:528:399,129:399:16002:129:5164:-305.668,0,-1279.93 0/1:636:504,131:504:20183:131:5234:-279.574,0,-1623.41 dDocent_Contig_3209 1 . N G 77.8076 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_3210 8 . T A 119.571 . AB=0.13;ABP=121.92;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=224;DPB=224;DPRA=1.03636;EPP=33.4109;EPPR=456.848;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=534;QR=7980;RO=209;RPL=0;RPP=33.4109;RPPR=456.848;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=209;SRP=456.848;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:13,1:13:496:1:39:0,-0.317855,-41.09 0/0:40:40,0:40:1527:0:0:0,-12.0412,-137.703 0/1:73:64,9:64:2446:9:339:-8.88912,0,-198.37 0/1:27:23,4:23:882:4:156:-6.28948,0,-71.5726 0/0:27:27,0:27:1041:0:0:0,-8.12781,-93.9983 0/0:43:42,0:42:1588:0:0:0,-12.6433,-142.792 dDocent_Contig_3211 32 . T C 512.363 . AB=0.159794;ABP=198.04;AC=1;AF=0.0833333;AN=12;AO=36;CIGAR=1X;DP=925;DPB=925;DPRA=1.96474;EPP=81.1833;EPPR=1933.45;GTI=0;LEN=1;MEANALT=1;MQM=59.6667;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994376;PAO=0;PQA=0;PQR=0;PRO=0;QA=1430;QR=34727;RO=889;RPL=0;RPP=81.1833;RPPR=1933.45;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=889;SRP=1933.45;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:177:177,0:177:6929:0:0:0,-53.2823,-623.366 0/0:181:180,1:180:7005:1:40:0,-50.5503,-626.269 0/0:59:59,0:59:2294:0:0:0,-17.7608,-206.631 0/0:76:76,0:76:2989:0:0:0,-22.8783,-269.12 0/1:194:163,31:163:6379:31:1232:-52.7592,0,-515.492 0/0:238:234,4:234:9131:4:158:0,-57.0458,-806.731 dDocent_Contig_3212 75 . T G 76.1298 . AB=0;ABP=0;AC=2;AF=0.2;AN=10;AO=2;CIGAR=3M1I1M1X3M1X2M8I1M;DP=46;DPB=47.5833;DPRA=0.181818;EPP=7.35324;EPPR=92.0407;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=76;QR=1366;RO=41;RPL=2;RPP=7.35324;RPPR=92.0407;RPR=0;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=41;SRP=92.0407;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:6:6,0:6:204:0:0:0,-1.80618,-18.694 0|0:13:13,0:13:434:0:0:0,-3.91339,-39.3818 1|1:2:0,2:0:0:2:76:-7.21481,-0.60206,0 0|0:14:11,0:11:363:0:0:0,-3.31133,-32.7083 .:.:.:.:.:.:.:. 0|0:11:11,0:11:365:0:0:0,-3.31133,-33.172 dDocent_Contig_3213 115 . T C 208.244 . AB=0.179104;ABP=62.9365;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=214;DPB=214;DPRA=1.0381;EPP=31.2394;EPPR=439.476;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=58.9303;NS=6;NUMALT=1;ODDS=0;PAIRED=0.692308;PAIREDR=0.711443;PAO=0;PQA=0;PQR=0;PRO=0;QA=522;QR=7921;RO=201;RPL=13;RPP=31.2394;RPPR=397.127;RPR=0;RUN=1;SAF=0;SAP=31.2394;SAR=13;SRF=5;SRP=397.127;SRR=196;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:42:41,1:41:1577:1:39:0,-8.74669,-137.063 0/1:42:33,9:33:1312:9:367:-20.752,0,-105.698 0/0:29:29,0:29:1143:0:0:0,-8.72987,-103.153 0/1:25:22,3:22:860:3:116:-3.29053,0,-66.1124 0/0:41:41,0:41:1623:0:0:0,-12.3422,-146.303 0/0:35:35,0:35:1406:0:0:0,-10.536,-122.468 dDocent_Contig_3215 23 . A G 170439 . AB=0.0335495;ABP=6706.28;AC=0;AF=0;AN=12;AO=144;CIGAR=1X3M1X;DP=5994;DPB=5994;DPRA=0.779412;EPP=315.702;EPPR=730.454;GTI=0;LEN=1;MEANALT=5.8;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5583;QR=13255;RO=335;RPL=0;RPP=315.702;RPPR=730.454;RPR=144;RUN=1;SAF=144;SAP=315.702;SAR=0;SRF=335;SRP=730.454;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:925:43,34,675,169:43:1711:34,675,169:1320,26699,6729:-2597.22,-2501.71,-2632.36,-413.166,-445.592,-350.853,-2056.12,-2088.55,0,-2146.13 0|0:1053:69,57,771,155:69:2706:57,771,155:2219,30470,6180:-2772.77,-2611.18,-2816.54,-286.389,-326.544,-276.814,-2284.64,-2324.79,0,-2460.5 0|0:594:98,7,410,76:98:3880:7,410,76:280,16067,3016:-1291.5,-1297.94,-1615.16,0,-296.262,-195.905,-1072.74,-1369,-71.0654,-1369.19 0|0:975:119,21,696,136:119:4724:21,696,136:813,27515,5428:-2286.39,-2255.44,-2638,-58.1309,-380.234,-237.498,-1875.2,-2197.31,0,-2223.15 0|0:1223:1,25,1109,84:1:32:25,1109,84:951,43796,3340:-3934.38,-3856.69,-3851.74,-331.265,-255.854,0,-3659.71,-3584.3,-58.8529,-3637.01 0|0:1224:5,0,1174,44:5:202:0,1174,44:0,46575,1770:-4168.88,-4170.39,-4187.04,-336.755,-353.409,0,-4024.52,-4041.18,-207.514,-4027.93 dDocent_Contig_3216 98 . N G 294.914 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=13;CIGAR=1X;DP=13;DPB=13;DPRA=0;EPP=31.2394;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=306;QR=0;RO=0;RPL=13;RPP=31.2394;RPPR=0;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:5:0,5:0:0:5:105:-9.65811,-1.50515,0 1/1:1:0,1:0:0:1:25:-2.49986,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:41:-3.89396,-0.60206,0 1/1:4:0,4:0:0:4:101:-9.3401,-1.20412,0 dDocent_Contig_3217 40 . T G 269.506 . AB=0.0662461;ABP=521.047;AC=0;AF=0;AN=12;AO=53;CIGAR=1X1M1X1M1X;DP=1859;DPB=1859;DPRA=0.979104;EPP=109.576;EPPR=3229.87;GTI=0;LEN=1;MEANALT=4;MQM=14.6604;MQMR=59.8084;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0.798398;PAO=0;PQA=0;PQR=0;PRO=0;QA=1834;QR=55196;RO=1498;RPL=1;RPP=109.576;RPPR=3229.87;RPR=52;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=1498;SRP=3255.88;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:269:219,12,38,0:219:7917:12,38,0:391,1347,0:0,-50.9722,-693.742,-20.36,-651.813,-655.316,-65.9256,-697.354,-666.755,-712.299 0|0:384:307,14,44,12:307:11005:14,44,12:481,1590,426:0,-73.6484,-967.086,-62.2286,-941.044,-946.56,-58.6343,-937.548,-926.054,-952.699 0|0:212:138,0,44,22:138:5158:0,44,22:0,1661,611:-2.25461,-43.7967,-466.283,-19.4534,-441.885,-428.64,0,-422.527,-398.14,-415.905 0|0:335:281,0,39,11:281:10511:0,39,11:0,1478,296:0,-84.5894,-945.464,-61.5179,-922.29,-910.55,-63.4049,-924.307,-901.135,-920.996 0|0:342:308,6,17,10:308:11488:6,17,10:193,652,352:0,-87.4786,-1025.91,-52.2045,-987.228,-987.376,-64.2337,-999.263,-964.04,-1001.52 0|0:317:245,21,11,38:245:9117:21,11,38:769,419,1305:-27.8793,-87.1536,-827.037,-86.6119,-818.335,-829.539,0,-731.829,-731.319,-734.903 dDocent_Contig_3218 33 . T G 1383.66 . AB=0.185819;ABP=353.679;AC=6;AF=0.5;AN=12;AO=76;CIGAR=1X;DP=409;DPB=409;DPRA=0;EPP=168.042;EPPR=717.451;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.105263;PAIREDR=0.864865;PAO=0;PQA=0;PQR=0;PRO=0;QA=3007;QR=13060;RO=333;RPL=0;RPP=168.042;RPPR=726.111;RPR=76;RUN=1;SAF=76;SAP=168.042;SAR=0;SRF=332;SRP=717.451;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:48:41,7:41:1614:7:279:-11.0313,0,-131.059 0/1:51:43,8:43:1660:8:304:-12.3594,0,-134.28 0/1:102:91,11:91:3609:11:434:-8.7094,0,-294.153 0/1:84:62,22:62:2399:22:881:-54.3149,0,-190.79 0/1:45:39,6:39:1541:6:242:-8.61118,0,-125.391 0/1:79:57,22:57:2237:22:867:-54.5621,0,-177.733 dDocent_Contig_3219 10 . G A 21370.2 . AB=0.422093;ABP=48.3486;AC=5;AF=0.416667;AN=12;AO=363;CIGAR=1X2M1X;DP=860;DPB=860;DPRA=0;EPP=791.255;EPPR=207.129;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=14242;QR=3635;RO=94;RPL=0;RPP=791.255;RPPR=207.129;RPR=363;RUN=1;SAF=363;SAP=791.255;SAR=0;SRF=94;SRP=207.129;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:168:18,44,106:18:697:44,106:1723,4165:-420.95,-284.7,-328.707,-84.4199,0,-109.763 1|0:201:10,124,66:10:390:124,66:4858,2588:-577.182,-180.743,-175.473,-367.395,0,-379.585 1|0:121:3,43,75:3:121:43,75:1704,2967:-373.283,-233.936,-230.967,-130.268,0,-117.665 1|0:169:9,91,69:9:347:91,69:3586,2708:-486.508,-194.206,-195.303,-266.528,0,-274.247 0|0:109:38,35,35:38:1462:35,35:1357,1368:-101.02,-0.988499,-110.465,0,-8.54008,-109.478 1|0:92:16,26,50:16:618:26,50:1014,1964:-189.288,-110.762,-153.683,-32.5978,0,-68.2947 dDocent_Contig_3220 10 . G A 232.533 . AB=0.0816327;ABP=300.989;AC=0;AF=0;AN=12;AO=16;CIGAR=1X1M;DP=867;DPB=867;DPRA=1.46051;EPP=37.7539;EPPR=1722.82;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.991162;PAO=0;PQA=0;PQR=0;PRO=0;QA=639;QR=31198;RO=792;RPL=0;RPP=37.7539;RPPR=1722.82;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=792;SRP=1722.82;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:86:86,0,0,0:86:3394:0,0,0:0,0,0:0,-25.8886,-305.533,-25.8886,-305.533,-305.533,-25.8886,-305.533,-305.533,-305.533 0|0:192:183,5,4,0:183:7194:5,4,0:198,156,0:0,-38.7883,-628.986,-42.2707,-617.671,-632.764,-55.0885,-630.491,-633.968,-646.788 0|0:87:87,0,0,0:87:3435:0,0,0:0,0,0:0,-26.1896,-309.21,-26.1896,-309.21,-309.21,-26.1896,-309.21,-309.21,-309.21 0|0:165:156,1,8,0:156:6142:1,8,0:40,316,0:0,-43.665,-548.601,-20.9636,-522.9,-523.787,-46.9607,-548.902,-526.196,-552.197 0|0:141:123,8,10,0:123:4835:8,10,0:327,369,0:0,-10.0255,-405.294,-6.87799,-377.534,-401.508,-37.0267,-407.703,-404.518,-434.687 0|0:196:157,1,22,16:157:6198:1,22,16:40,875,639:-24.7762,-68.7428,-578.406,0,-506.668,-503.34,-19.4074,-526.077,-457.333,-524.556 dDocent_Contig_3221 10 . G A 380.064 . AB=0.15;ABP=194.534;AC=4;AF=0.333333;AN=12;AO=32;CIGAR=1X;DP=257;DPB=257;DPRA=0;EPP=72.4974;EPPR=487.249;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.7812;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.6875;PAIREDR=0.834081;PAO=0;PQA=0;PQR=0;PRO=0;QA=1286;QR=8940;RO=223;RPL=0;RPP=72.4974;RPPR=487.249;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=223;SRP=487.249;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:24,8:24:970:8:325:-19.9867,0,-77.9662 0/1:21:17,4:17:677:4:160:-8.44967,0,-54.9394 0/1:46:37,7:37:1495:7:284:-12.2802,0,-121.134 0/0:30:28,2:28:1128:2:81:0,-1.34517,-94.1162 0/1:81:73,8:73:2916:8:317:-4.51148,0,-238.155 0/0:47:44,3:44:1754:3:119:0,-3.0534,-146.982 dDocent_Contig_3222 22 . T A 11503.8 . AB=0.355631;ABP=216.813;AC=5;AF=0.416667;AN=12;AO=430;CIGAR=1X;DP=1397;DPB=1397;DPRA=0;EPP=936.743;EPPR=2102.82;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997674;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=17219;QR=38798;RO=967;RPL=0;RPP=936.743;RPPR=2102.82;RPR=430;RUN=1;SAF=430;SAP=936.743;SAR=0;SRF=967;SRP=2102.82;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:214:121,93:121:4859:93:3700:-268.601,0,-372.772 0/1:312:155,157:155:6257:157:6273:-470.402,0,-468.932 0/1:157:104,53:104:4210:53:2133:-144.878,0,-331.575 0/1:208:116,92:116:4625:92:3718:-272.006,0,-353.539 0/0:216:206,10:206:8231:10:387:0,-29.8421,-705.148 0/1:290:265,25:265:10616:25:1008:-3.71489,0,-867.404 dDocent_Contig_3223 1 . N A 1082.17 . AB=0.180328;ABP=57.1547;AC=12;AF=1;AN=12;AO=11;CIGAR=1X1M5I2M;DP=108;DPB=156.75;DPRA=2.59574;EPP=26.8965;EPPR=0;GTI=0;LEN=1;MEANALT=3;MQM=38.1818;MQMR=0;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=347;QR=0;RO=0;RPL=0;RPP=26.8965;RPPR=0;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:19:0,4,0:0:0:4,0:150,0:-12.8041,-1.20412,0,-12.8041,-1.20412,-12.8041 1|1:18:0,3,0:0:0:3,0:113,0:-9.63534,-0.90309,0,-9.63534,-0.90309,-9.63534 1|1:4:0,4,0:0:0:4,0:151,0:-13.2149,-1.20412,0,-13.2149,-1.20412,-13.2149 1|1:6:0,2,0:0:0:2,0:75,0:-6.40584,-0.60206,0,-6.40584,-0.60206,-6.40584 1|1:22:0,11,3:0:0:11,3:415,90:-38.4157,-6.36521,-3.05388,-32.042,0,-31.1389 1|1:39:0,4,8:0:0:4,8:150,257:-30.956,-19.3568,-18.1527,-11.5991,0,-9.1909 dDocent_Contig_3226 7 . C A 36920.4 . AB=0.133813;ABP=812.488;AC=2;AF=0.166667;AN=12;AO=94;CIGAR=1X3M2D4M;DP=1277;DPB=1037;DPRA=1.00991;EPP=207.129;EPPR=150.67;GTI=0;LEN=1;MEANALT=4.25;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3608;QR=2657;RO=68;RPL=0;RPP=207.129;RPPR=150.67;RPR=94;RUN=1;SAF=94;SAP=207.129;SAR=0;SRF=68;SRP=150.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:133:17,0,114:17:666:0,114:0,4322:-349.411,-354.529,-409.297,0,-54.9328,-20.6154 0|0:227:16,0,207:16:622:0,207:0,7733:-639.493,-644.31,-695.423,-11.1894,-62.3132,0 0|0:252:29,2,213:29:1136:2,213:78,8041:-650.271,-652.589,-745.4,0,-87.0091,-29.3015 0|0:222:6,1,213:6:233:1,213:32,8052:-703.163,-702.391,-721.236,-44.9662,-61.5491,0 1|0:215:0,67,148:0:0:67,148:2568,5577:-668.128,-457.36,-437.191,-211.149,0,-166.596 1|0:228:0,24,197:0:0:24,197:930,7469:-688.796,-612.391,-605.166,-76.4183,0,-17.1154 dDocent_Contig_3227 11 . T A 460.415 . AB=0.0988095;ABP=1177.35;AC=1;AF=0.0833333;AN=12;AO=83;CIGAR=1X;DP=3729;DPB=3729;DPRA=1.45379;EPP=183.243;EPPR=7889.8;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999725;PAO=0;PQA=0;PQR=0;PRO=0;QA=3295;QR=144582;RO=3632;RPL=0;RPP=183.243;RPPR=7889.8;RPR=83;RUN=1;SAF=83;SAP=183.243;SAR=0;SRF=3632;SRP=7889.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:645:645,0:645:25551:0:0:0,-194.164,-2297.4 0/0:674:674,0:674:26847:0:0:0,-202.894,-2413.86 0/0:415:415,0:415:16517:0:0:0,-124.927,-1485.22 0/0:592:592,0:592:23497:0:0:0,-178.21,-2112.72 0/0:563:563,0:563:22477:0:0:0,-169.48,-2020.99 0/1:840:743,83:743:29693:83:3295:-47.5643,0,-2420.63 dDocent_Contig_3228 12 . G A 2711.99 . AB=0.138985;ABP=1632.02;AC=5;AF=0.416667;AN=12;AO=207;CIGAR=1X;DP=1896;DPB=1896;DPRA=0;EPP=452.505;EPPR=3670.63;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.915927;PAO=0;PQA=0;PQR=0;PRO=0;QA=8192;QR=67622;RO=1689;RPL=0;RPP=452.505;RPPR=3670.63;RPR=207;RUN=1;SAF=207;SAP=452.505;SAR=0;SRF=1689;SRP=3670.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:279:221,58:221:8845:58:2292:-122.454,0,-711.517 0/1:353:319,34:319:12755:34:1330:-13.6943,0,-1040.75 0/1:178:159,19:159:6353:19:738:-13.1541,0,-517.891 0/1:270:218,52:218:8699:52:2076:-105.74,0,-701.109 0/0:457:450,7:450:18045:7:276:0,-112.362,-1597.32 0/1:359:322,37:322:12925:37:1480:-25.3793,0,-1054.2 dDocent_Contig_3229 11 . T G 207.913 . AB=0.195652;ABP=40.0197;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1M1X6M;DP=376;DPB=370.75;DPRA=1.07865;EPP=33.4109;EPPR=708.739;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.963077;PAO=0;PQA=0;PQR=0;PRO=0;QA=558;QR=12841;RO=325;RPL=0;RPP=33.4109;RPPR=708.739;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=325;SRP=708.739;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:53:49,4,0,0,0:49:1950:4,0,0,0:146,0,0,0:0,-2.45745,-162.211,-14.7505,-163.415,-175.341,-14.7505,-163.415,-175.341,-175.341,-14.7505,-163.415,-175.341,-175.341,-175.341 0|0:73:73,0,0,0,0:73:2888:0,0,0,0:0,0,0,0:0,-21.9752,-260.047,-21.9752,-260.047,-260.047,-21.9752,-260.047,-260.047,-260.047,-21.9752,-260.047,-260.047,-260.047,-260.047 0|0:82:67,4,5,6,0:67:2642:4,5,6,0:147,193,235,0:0,-8.15724,-224.323,-4.3211,-209.681,-220.192,-0.840721,-206.205,-202.375,-216.415,-20.169,-225.527,-221.698,-218.221,-237.544 0|1:46:26,6,9,5,0:26:1013:6,9,5,0:227,365,195,0:-22.2832,-11.5079,-92.9469,0,-64.6494,-80.5468,-14.0863,-78.7288,-67.231,-95.8299,-30.11,-94.7531,-83.2561,-97.3351,-113.36 0|0:70:62,0,0,0,6:62:2446:0,0,0,6:0,0,0,246:-1.64433,-20.3082,-221.546,-20.3082,-221.546,-221.546,-20.3082,-221.546,-221.546,-221.546,0,-201.24,-201.24,-201.24,-199.434 0|0:52:48,0,0,0,4:48:1902:0,0,0,4:0,0,0,158:0,-14.4494,-171.002,-14.4494,-171.002,-171.002,-14.4494,-171.002,-171.002,-171.002,-1.0542,-158.001,-158.001,-158.001,-156.797 dDocent_Contig_3230 50 . A G 224.45 . AB=0.297297;ABP=16.2152;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=188;DPB=188;DPRA=1.21368;EPP=31.2394;EPPR=372.211;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.538462;PAIREDR=0.752874;PAO=0;PQA=0;PQR=0;PRO=0;QA=453;QR=5807;RO=174;RPL=13;RPP=31.2394;RPPR=372.211;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=174;SRP=380.846;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:26,11:26:866:11:383:-23.6668,0,-67.1116 0/0:22:22,0:22:696:0:0:0,-6.62266,-62.9377 0/0:31:31,0:31:1035:0:0:0,-9.33193,-93.4488 0/0:34:32,2:32:1090:2:70:0,-3.58762,-91.7553 0/0:26:26,0:26:908:0:0:0,-7.82678,-82.0359 0/0:38:37,0:37:1212:0:0:0,-11.1381,-109.292 dDocent_Contig_3231 34 . C T 64.2021 . AB=0.0888889;ABP=795.742;AC=1;AF=0.0833333;AN=12;AO=126;CIGAR=1X;DP=3093;DPB=3093;DPRA=0;EPP=276.616;EPPR=6439.25;GTI=0;LEN=1;MEANALT=1.5;MQM=48.7302;MQMR=59.9933;NS=6;NUMALT=1;ODDS=0;PAIRED=0.396825;PAIREDR=0.983468;PAO=0;PQA=0;PQR=0;PRO=0;QA=4903;QR=116492;RO=2964;RPL=0;RPP=276.616;RPPR=6439.25;RPR=126;RUN=1;SAF=126;SAP=276.616;SAR=0;SRF=2964;SRP=6439.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:587:573,14:573:22462:14:488:0,-134.781,-1977.85 0/0:598:588,10:588:23206:10:388:0,-148.209,-2054.83 0/0:349:333,15:333:13176:15:589:0,-57.264,-1137.02 0/0:625:600,25:600:23603:25:978:0,-105.436,-2039.61 0/1:540:491,48:491:19200:48:1907:-7.94309,0,-1563.9 0/0:394:379,14:379:14845:14:553:0,-69.717,-1286.03 dDocent_Contig_3232 9 . G C 30027.9 . AB=0.7569;ABP=543.011;AC=8;AF=0.666667;AN=12;AO=967;CIGAR=1M1X8M;DP=1230;DPB=1190.8;DPRA=0;EPP=2102.82;EPPR=430.79;GTI=0;LEN=1;MEANALT=3.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.11022e-16;PAIRED=0.995863;PAIREDR=0.989848;PAO=0;PQA=0;PQR=0;PRO=0;QA=37190;QR=7701;RO=197;RPL=0;RPP=2102.82;RPPR=430.79;RPR=967;RUN=1;SAF=967;SAP=2102.82;SAR=0;SRF=197;SRP=430.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:135:7,7,118:7:275:7,118:257,4498:-379.767,-360.865,-381.378,-12.8965,-14.5235,0 0|1:234:38,17,174:38:1476:17,174:595,6721:-540.598,-503.633,-619.793,0,-72.9045,-68.9236 0|1:99:9,9,80:9:349:9,80:320,3101:-252.085,-228.721,-254.682,0,-2.62278,-4.60077 1|1:153:12,5,136:12:464:5,136:175,5207:-426.525,-415.902,-452.509,-2.80274,-26.714,0 0|1:324:99,0,223:99:3878:0,223:0,8589:-675.703,-705.505,-1024.39,0,-319.159,-252.029 0|1:285:32,11,236:32:1259:11,236:402,9074:-735.331,-712.116,-812.373,0,-70.744,-32.5446 dDocent_Contig_3233 40 . A T 31.58 . AB=0.142857;ABP=26.2761;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=234;DPB=234;DPRA=0.802395;EPP=16.0391;EPPR=495.935;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.166667;PAIREDR=0.519824;PAO=0;PQA=0;PQR=0;PRO=0;QA=240;QR=8994;RO=227;RPL=0;RPP=16.0391;RPPR=495.935;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=227;SRP=495.935;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:49,0:49:1939:0:0:0,-14.7505,-174.307 0/0:46:43,3:43:1696:3:122:0,-2.47489,-141.494 0/1:21:18,3:18:724:3:118:-4.68057,0,-59.163 0/0:36:36,0:36:1405:0:0:0,-10.8371,-126.698 0/0:38:38,0:38:1508:0:0:0,-11.4391,-135.963 0/0:43:43,0:43:1722:0:0:0,-12.9443,-155.196 dDocent_Contig_3234 10 . C T 618.687 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=47;CIGAR=2X;DP=3533;DPB=3533;DPRA=0;EPP=105.07;EPPR=7021.21;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.22045e-16;PAIRED=1;PAIREDR=0.999381;PAO=0;PQA=0;PQR=0;PRO=0;QA=1860;QR=129645;RO=3232;RPL=0;RPP=105.07;RPPR=7021.21;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=3232;SRP=7021.21;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:574:536,5,9:536:21450:5,9:199,364:0,-144.968,-1910.38,-131.339,-1881.87,-1895.55 0|0:651:617,14,4:617:24737:14,4:571,160:0,-138.623,-2172.39,-172.556,-2163.42,-2209.33 0|0:306:272,18,6:272:10896:18,6:712,243:0,-23.2917,-915.477,-61.842,-900.859,-957.644 0|0:492:450,10,25:450:18082:10,25:378,971:0,-104.484,-1591.48,-55.7022,-1514.73,-1538.18 0|0:744:671,0,68:671:26957:0,68:0,2705:-20.7079,-222.699,-2443.96,0,-2221.25,-2200.78 0|0:766:686,0,77:686:27523:0,77:0,3048:-44.3827,-250.889,-2518.55,0,-2267.71,-2244.54 dDocent_Contig_3235 139 . T A 2535.41 . AB=0.150895;ABP=416.917;AC=3;AF=0.25;AN=12;AO=59;CIGAR=2X2M1X;DP=391;DPB=391;DPRA=0;EPP=131.127;EPPR=504.62;GTI=0;LEN=1;MEANALT=2.83333;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0;PAIREDR=0.995671;PAO=0;PQA=0;PQR=0;PRO=0;QA=2251;QR=8959;RO=231;RPL=0;RPP=131.127;RPPR=504.62;RPR=59;RUN=1;SAF=0;SAP=131.127;SAR=59;SRF=0;SRP=504.62;SRR=231;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:69:44,0,5,13,7:44:1710:0,5,13,7:0,198,507,215:-28.4525,-41.6978,-182.219,-25.3941,-165.921,-164.416,0,-140.543,-124.244,-136.629,-24.4849,-164.991,-148.693,-123.316,-162.883 0|1:52:38,0,4,8,2:38:1466:0,4,8,2:0,160,315,67:-14.4836,-25.9227,-146.302,-12.7373,-133.12,-131.916,0,-120.386,-107.205,-117.978,-20.5053,-140.878,-127.696,-114.963,-140.276 0|1:52:32,0,5,15,0:32:1260:0,5,15,0:0,198,571,0:-37.1888,-46.8218,-150.482,-30.5212,-134.184,-132.679,0,-103.653,-87.3554,-99.1371,-46.8218,-150.482,-134.184,-103.653,-150.482 0|0:58:37,0,14,4,2:37:1440:0,14,4,2:0,533,131,67:-32.617,-43.7551,-162.112,0,-118.396,-114.182,-33.1824,-151.535,-107.821,-150.331,-38.3317,-156.687,-112.972,-146.111,-156.085 0|0:69:36,0,22,11,0:36:1359:0,22,11,0:0,867,414,0:-60.5037,-71.3408,-182.701,0,-111.367,-104.744,-37.4295,-148.785,-77.4499,-145.474,-71.3408,-182.701,-111.367,-148.785,-182.701 0|0:91:44,5,34,8,0:44:1724:5,34,8,0:197,1279,313,0:-91.5171,-88.5535,-228.818,0,-125.555,-131.528,-79.0243,-204.587,-116.027,-218.387,-104.762,-230.323,-141.763,-220.795,-246.531 dDocent_Contig_3236 55 . A T 7296.39 . AB=0.556452;ABP=9.87495;AC=8;AF=0.666667;AN=12;AO=277;CIGAR=1X3M;DP=402;DPB=402;DPRA=0;EPP=604.508;EPPR=244.044;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9446;QR=3815;RO=111;RPL=0;RPP=604.508;RPPR=244.044;RPR=277;RUN=1;SAF=0;SAP=604.508;SAR=277;SRF=0;SRP=244.044;SRR=111;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:74:17,0,56:17:579:0,56:0,1934:-152.183,-157.301,-204.274,0,-47.1252,-30.2675 1|1:84:8,0,75:8:267:0,75:0,2554:-205.765,-208.174,-229.787,-0.924503,-22.5773,0 1|1:70:6,0,64:6:208:0,64:0,2202:-179.391,-181.198,-198.105,-2.01251,-19.2659,0 0|1:76:18,0,58:18:616:0,58:0,1955:-153.347,-158.765,-208.768,0,-50.3439,-32.8841 0|1:57:38,5,14:38:1318:5,14:178,481:-27.6119,-24.5401,-130.174,0,-92.6198,-102.914 0|1:41:24,6,10:24:827:6,10:208,320:-18.5619,-8.86238,-74.2662,0,-50.2971,-64.1962 dDocent_Contig_3237 106 . N A 5313.05 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=172;CIGAR=2X;DP=172;DPB=172;DPRA=0;EPP=376.504;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5889;QR=0;RO=0;RPL=0;RPP=376.504;RPPR=0;RPR=172;RUN=1;SAF=0;SAP=376.504;SAR=172;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:104:0,104:0:0:104:3570:-321.529,-31.3071,0 1|1:67:0,67:0:0:67:2287:-206.099,-20.169,0 dDocent_Contig_3238 35 . T A 5370.93 . AB=0.209796;ABP=899.112;AC=6;AF=0.5;AN=12;AO=257;CIGAR=1X;DP=1225;DPB=1225;DPRA=0;EPP=561.079;EPPR=2105;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998967;PAO=0;PQA=0;PQR=0;PRO=0;QA=10175;QR=38534;RO=968;RPL=0;RPP=561.079;RPPR=2105;RPR=257;RUN=1;SAF=257;SAP=561.079;SAR=0;SRF=968;SRP=2105;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:221:193,28:193:7725:28:1122:-34.7336,0,-628.316 0/1:279:181,98:181:7192:98:3882:-265.395,0,-562.946 0/1:299:263,36:263:10452:36:1433:-39.2112,0,-849.952 0/1:206:169,37:169:6701:37:1471:-70.6234,0,-540.768 0/1:144:110,34:110:4365:34:1367:-79.9352,0,-349.443 0/1:76:52,24:52:2099:24:900:-58.4159,0,-166.206 dDocent_Contig_3239 37 . T G 6726.21 . AB=0.488273;ABP=3.57053;AC=6;AF=0.5;AN=12;AO=229;CIGAR=1X;DP=469;DPB=469;DPRA=0;EPP=500.277;EPPR=524.164;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.995633;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9151;QR=9586;RO=240;RPL=0;RPP=500.277;RPPR=524.164;RPR=229;RUN=1;SAF=229;SAP=500.277;SAR=0;SRF=240;SRP=524.164;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:48:28,20:28:1124:20:781:-56.1535,0,-86.9953 0/1:81:34,47:34:1358:47:1852:-142.51,0,-98.095 0/1:160:77,83:77:3085:83:3354:-253.734,0,-229.555 0/1:72:42,30:42:1689:30:1207:-87.2311,0,-130.551 0/1:55:25,30:25:995:30:1183:-90.1908,0,-73.2864 0/1:53:34,19:34:1335:19:774:-54.0244,0,-104.447 dDocent_Contig_3240 107 . N C 121.237 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=117;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:23:-2.29991,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:27:-2.69978,-0.30103,0 1/1:2:0,2:0:0:2:57:-5.41438,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:10:-0.999996,-0.30103,0 dDocent_Contig_3241 98 . N A 57.5652 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=2X;DP=2;DPB=7;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=4;PQA=132;PQR=0;PRO=0;QA=64;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:64:-5.75544,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_3242 19 . C T 14477.1 . AB=0.779271;ABP=355.952;AC=8;AF=0.666667;AN=12;AO=406;CIGAR=1X3M;DP=521;DPB=521;DPRA=0;EPP=884.628;EPPR=118.098;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.953202;PAIREDR=0.90566;PAO=0;PQA=0;PQR=0;PRO=0;QA=16209;QR=2039;RO=53;RPL=0;RPP=884.628;RPPR=118.098;RPR=406;RUN=1;SAF=406;SAP=884.628;SAR=0;SRF=53;SRP=118.098;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:63:11,7,45:11:422:7,45:265,1798:-144.789,-126.382,-158.907,0,-12.9192,-21.0916 0|1:112:11,4,97:11:416:4,97:163,3829:-311.702,-301.565,-334.45,0,-20.6138,-4.86895 0|1:100:15,7,78:15:588:7,78:282,3143:-254.533,-235.805,-282.048,0,-25.0973,-24.8639 0|1:99:16,1,81:16:613:1,81:40,3249:-262.864,-264.386,-314.381,0,-46.9887,-25.9012 1|1:81:0,15,66:0:0:15,66:601,2650:-268.267,-218.754,-214.238,-49.9134,0,-30.0454 1|1:66:0,27,39:0:0:27,39:1088,1540:-216.782,-127.101,-118.973,-90.0798,0,-78.3396 dDocent_Contig_3243 107 . N A 1169.52 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=39;CIGAR=1X;DP=39;DPB=39;DPRA=0;EPP=87.6977;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1282;QR=0;RO=0;RPL=0;RPP=87.6977;RPPR=0;RPR=39;RUN=1;SAF=0;SAP=87.6977;SAR=39;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:17:0,17:0:0:17:564:-51.0754,-5.11751,0 1/1:21:0,21:0:0:21:683:-61.7755,-6.32163,0 dDocent_Contig_3244 22 . A G 926.435 . AB=0.202381;ABP=196.892;AC=5;AF=0.416667;AN=12;AO=56;CIGAR=1X;DP=339;DPB=339;DPRA=0;EPP=124.613;EPPR=617.537;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.928571;PAIREDR=0.766784;PAO=0;PQA=0;PQR=0;PRO=0;QA=2110;QR=11201;RO=283;RPL=0;RPP=124.613;RPPR=617.537;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=283;SRP=617.537;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:46:28,18:28:1124:18:662:-46.0332,0,-87.5964 0/1:40:25,15:25:948:15:592:-41.5733,0,-73.5721 0/1:19:15,4:15:607:4:161:-9.1557,0,-49.2487 0/1:52:47,5:47:1832:5:204:-3.09047,0,-149.441 0/0:87:82,5:82:3274:5:166:0,-10.9324,-279.468 0/1:95:86,9:86:3416:9:325:-0.982477,0,-278.895 dDocent_Contig_3245 48 . T C 247.347 . AB=0.194444;ABP=61.3988;AC=3;AF=0.25;AN=12;AO=20;CIGAR=1X;DP=197;DPB=197;DPRA=0.738095;EPP=46.4397;EPPR=387.361;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.55;PAIREDR=0.610169;PAO=0;PQA=0;PQR=0;PRO=0;QA=801;QR=6532;RO=177;RPL=0;RPP=46.4397;RPPR=387.361;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=177;SRP=387.361;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:42:42,0:42:1579:0:0:0,-12.6433,-142.37 0/0:63:58,5:58:2101:5:200:0,-0.585856,-170.93 0/1:23:19,4:19:709:4:159:-7.76775,0,-57.2127 0/1:35:29,6:29:1064:6:243:-11.7115,0,-85.5189 0/1:14:10,4:10:386:4:159:-10.477,0,-30.8817 0/0:20:19,1:19:693:1:40:0,-2.02492,-58.6954 dDocent_Contig_3246 17 . C T 37.5975 . AB=0.102941;ABP=96.1281;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=332;DPB=332;DPRA=1.35354;EPP=20.3821;EPPR=706.567;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.4074;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.975309;PAO=0;PQA=0;PQR=0;PRO=0;QA=321;QR=12938;RO=324;RPL=0;RPP=20.3821;RPPR=706.567;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=324;SRP=706.567;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:44,0:44:1766:0:0:0,-13.2453,-159.156 0/0:66:65,1:65:2614:1:39:0,-15.9714,-231.484 0/0:34:34,0:34:1370:0:0:0,-10.235,-123.239 0/1:68:61,7:61:2418:7:282:-5.28255,0,-197.302 0/0:57:57,0:57:2248:0:0:0,-17.1587,-196.711 0/0:63:63,0:63:2522:0:0:0,-18.9649,-224.5 dDocent_Contig_3247 74 . C T 24490.5 . AB=0.862884;ABP=486.838;AC=9;AF=0.75;AN=12;AO=797;CIGAR=1X;DP=886;DPB=886;DPRA=0;EPP=1733.67;EPPR=196.271;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.984944;PAIREDR=0.966292;PAO=0;PQA=0;PQR=0;PRO=0;QA=29844;QR=3383;RO=89;RPL=797;RPP=1733.67;RPPR=196.271;RPR=0;RUN=1;SAF=797;SAP=1733.67;SAR=0;SRF=89;SRP=196.271;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:135:6,129:6:221:129:4873:-418.367,-20.3922,0 1/1:187:17,170:17:621:170:6150:-497.343,-0.0677638,0 0/1:108:20,88:20:773:88:3293:-264.005,0,-37.3863 0/1:158:15,143:15:579:143:5423:-440.498,0,-4.88964 0/1:157:23,134:23:880:134:5061:-408.256,0,-32.2568 1/1:141:8,133:8:309:133:5044:-425.803,-14.2725,0 dDocent_Contig_3248 49 . T A 448.257 . AB=0.0980392;ABP=74.5837;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X4M2X3M1X;DP=275;DPB=275;DPRA=0;EPP=22.5536;EPPR=480.734;GTI=0;LEN=1;MEANALT=3.8;MQM=27;MQMR=60;NS=6;NUMALT=6;ODDS=0;PAIRED=0;PAIREDR=0.868182;PAO=0;PQA=0;PQR=0;PRO=0;QA=238;QR=7858;RO=220;RPL=9;RPP=22.5536;RPPR=455.032;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=217;SRP=455.032;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:28:19,4,0,0,0,2,0:19:680:4,0,0,0,2,0:142,0,0,0,74,0:-0.464448,0,-54.2528,-6.18402,-55.457,-61.6832,-6.18402,-55.457,-61.6832,-61.6832,-6.18402,-55.457,-61.6832,-61.6832,-61.6832,-0.106247,-49.4018,-55.6265,-55.6265,-55.6265,-55.0245,-6.18402,-55.457,-61.6832,-61.6832,-61.6832,-55.6265,-61.6832 0|0:82:72,1,0,1,2,0,4:72:2550:1,0,1,2,0,4:39,0,22,68,0,156:0,-20.1008,-227.552,-21.6742,-227.853,-229.434,-20.1116,-226.283,-227.864,-227.563,-16.1469,-222.337,-223.918,-222.348,-223.316,-21.6742,-227.853,-229.434,-227.864,-223.918,-229.434,-8.78727,-215.027,-216.609,-215.038,-211.093,-216.609,-215.404 0|0:48:45,0,0,1,0,0,0:45:1638:0,0,1,0,0,0:0,0,27,0,0,0:0,-13.5463,-147.363,-13.5463,-147.363,-147.363,-11.7345,-145.507,-145.507,-145.206,-13.5463,-147.363,-147.363,-145.507,-147.363,-13.5463,-147.363,-147.363,-145.507,-147.363,-147.363,-13.5463,-147.363,-147.363,-145.507,-147.363,-147.363,-147.363 0|0:66:62,0,0,2,0,0,0:62:2209:0,0,2,0,0,0:0,0,54,0,0,0:0,-18.6639,-198.76,-18.6639,-198.76,-198.76,-15.0007,-195.046,-195.046,-194.444,-18.6639,-198.76,-198.76,-195.046,-198.76,-18.6639,-198.76,-198.76,-195.046,-198.76,-198.76,-18.6639,-198.76,-198.76,-195.046,-198.76,-198.76,-198.76 0|0:22:9,0,0,2,0,0,10:9:316:0,0,2,0,0,10:0,0,54,0,0,387:-29.2052,-31.9145,-57.6308,-31.9145,-57.6308,-57.6308,-28.2174,-53.9249,-53.9249,-53.3228,-31.9145,-57.6308,-57.6308,-53.9249,-57.6308,-31.9145,-57.6308,-57.6308,-53.9249,-57.6308,-57.6308,0,-25.8112,-25.8112,-22.1102,-25.8112,-25.8112,-22.8009 0|0:29:13,0,2,3,2,0,7:13:465:0,2,3,2,0,7:0,69,81,80,0,276:-18.8386,-22.752,-60.6738,-20.7052,-58.6148,-58.0128,-17.1988,-55.1107,-53.0545,-54.2076,-16.1527,-54.0796,-52.0215,-48.517,-53.4775,-22.752,-60.6738,-58.6148,-55.1107,-54.0796,-60.6738,0,-37.9515,-35.8962,-32.3905,-31.3544,-37.9515,-35.8443 dDocent_Contig_3249 21 . C A 96.8628 . AB=0.121622;ABP=95.0338;AC=1;AF=0.0833333;AN=12;AO=26;CIGAR=1X;DP=1222;DPB=1222;DPRA=0.789474;EPP=59.4686;EPPR=2600.09;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1046;QR=47726;RO=1196;RPL=0;RPP=59.4686;RPPR=2600.09;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=1196;SRP=2600.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:247:247,0:247:9816:0:0:0,-74.3544,-882.822 0/0:266:263,3:263:10495:3:119:0,-68.979,-932.754 0/0:308:302,6:302:12063:6:233:0,-71.3798,-1063.47 0/0:248:246,2:246:9833:2:82:0,-66.8758,-876.561 0/0:79:73,6:73:2924:6:244:0,-1.44254,-240.914 0/1:74:65,9:65:2595:9:368:-11.2091,0,-211.41 dDocent_Contig_3250 110 . T C 342.765 . AB=0.151111;ABP=240.898;AC=1;AF=0.0833333;AN=12;AO=54;CIGAR=1X;DP=1238;DPB=1238;DPRA=1.00243;EPP=120.27;EPPR=2571.86;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998309;PAO=0;PQA=0;PQR=0;PRO=0;QA=1832;QR=39957;RO=1183;RPL=0;RPP=120.27;RPPR=2571.86;RPR=54;RUN=1;SAF=0;SAP=120.27;SAR=54;SRF=0;SRP=2571.86;SRR=1183;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:215:214,0:214:7238:0:0:0,-64.4204,-651.459 0/0:197:197,0:197:6667:0:0:0,-59.3029,-600.162 0/0:96:90,6:90:2985:6:210:0,-9.65642,-249.647 0/0:204:191,13:191:6441:13:446:0,-20.9417,-539.353 0/0:301:300,1:300:10173:1:29:0,-87.7104,-912.691 0/1:225:191,34:191:6453:34:1147:-35.7994,0,-513.173 dDocent_Contig_3251 98 . N A 65.5375 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0.5;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=69;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_3252 61 . C T 247.426 . AB=0.123656;ABP=231.832;AC=2;AF=0.166667;AN=12;AO=24;CIGAR=1X;DP=323;DPB=323;DPRA=2.23;EPP=55.1256;EPPR=652.281;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.983278;PAO=0;PQA=0;PQR=0;PRO=0;QA=960;QR=11890;RO=299;RPL=24;RPP=55.1256;RPPR=652.281;RPR=0;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=299;SRP=652.281;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:32,0:32:1286:0:0:0,-9.63296,-116.002 0/1:39:34,5:34:1352:5:204:-7.00386,0,-110.198 0/1:147:129,18:129:5126:18:721:-20.9606,0,-416.959 0/0:43:43,0:43:1721:0:0:0,-12.9443,-155.107 0/0:25:25,0:25:967:0:0:0,-7.52575,-87.3255 0/0:37:36,1:36:1438:1:35:0,-7.63948,-126.174 dDocent_Contig_3253 15 . G A 16894.6 . AB=0.246022;ABP=1834.01;AC=6;AF=0.5;AN=12;AO=804;CIGAR=1X;DP=3268;DPB=3268;DPRA=0;EPP=1748.87;EPPR=5329.63;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999185;PAO=0;PQA=0;PQR=0;PRO=0;QA=29803;QR=95276;RO=2453;RPL=0;RPP=1748.87;RPPR=5329.63;RPR=804;RUN=1;SAF=804;SAP=1748.87;SAR=0;SRF=2453;SRP=5329.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:514:311,195:311:12063:195:7094:-485.694,0,-932.259 0/1:557:429,128:429:16582:128:4697:-255.111,0,-1323.59 0/1:354:271,82:271:10593:82:3114:-173.788,0,-846.13 0/1:484:427,57:427:16673:57:2089:-42.5396,0,-1353.68 0/1:751:515,235:515:19911:235:8847:-569.783,0,-1564.37 0/1:608:500,107:500:19454:107:3962:-173.763,0,-1566.52 dDocent_Contig_3254 47 . G A 511.341 . AB=0.220472;ABP=89.2024;AC=5;AF=0.416667;AN=12;AO=29;CIGAR=1X;DP=155;DPB=155;DPRA=0;EPP=65.983;EPPR=276.616;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.857143;PAO=0;PQA=0;PQR=0;PRO=0;QA=1114;QR=4950;RO=126;RPL=0;RPP=65.983;RPPR=276.616;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=126;SRP=276.616;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:13,6:13:527:6:231:-15.4378,0,-42.0572 0/0:28:27,1:27:1028:1:39:0,-4.53228,-88.9092 0/1:24:20,4:20:763:4:159:-7.46723,0,-61.7528 0/1:26:23,3:23:926:3:119:-3.26823,0,-75.8178 0/1:33:27,6:27:1077:6:212:-9.48346,0,-87.2839 0/1:25:16,9:16:629:9:354:-24.6954,0,-49.4197 dDocent_Contig_3255 12 . A G 24475.4 . AB=0.108087;ABP=1718.68;AC=0;AF=0;AN=12;AO=139;CIGAR=1X2M1X1M1X;DP=1286;DPB=1286;DPRA=0;EPP=304.845;EPPR=539.364;GTI=0;LEN=1;MEANALT=4.33333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=2.22045e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5438;QR=9483;RO=247;RPL=0;RPP=304.845;RPPR=539.364;RPR=139;RUN=1;SAF=139;SAP=304.845;SAR=0;SRF=247;SRP=539.364;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:223:59,36,59,68:59:2270:36,59,68:1401,2322,2693:-208.495,-111.126,-286.656,-35.2575,-106.494,-203.863,-4.63385,-75.8703,0,-170.531 0|0:208:83,17,15,92:83:3172:17,15,92:679,590,3644:-274.908,-243.966,-499.098,-251.365,-455.686,-507.098,0,-204.315,-211.715,-232.55 0|0:215:63,39,27,86:63:2421:39,27,86:1511,1075,3416:-262.237,-157.089,-344.078,-192.685,-267.302,-383.288,0,-74.6158,-110.212,-172.842 0|0:191:32,26,6,124:32:1235:26,6,124:1026,229,4861:-390.021,-315.232,-408.826,-380.873,-397.872,-480.488,0,-16.9947,-82.6397,-64.0926 0|0:193:0,6,128,57:0:0:6,128,57:239,5057,2277:-603.639,-583.957,-582.151,-187.533,-167.852,-149.002,-416.105,-396.423,0,-398.946 0|0:256:10,15,161,69:10:385:15,161,69:582,6370,2788:-719.461,-674.654,-701.748,-198.253,-182.046,-181.395,-492.62,-476.412,0,-503.458 dDocent_Contig_3256 12 . G A 11689.4 . AB=0.511111;ABP=4.36144;AC=6;AF=0.5;AN=12;AO=644;CIGAR=1X;DP=1260;DPB=1260;DPRA=0;EPP=1401.44;EPPR=1340.64;GTI=0;LEN=1;MEANALT=1;MQM=29.4984;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=25404;QR=24294;RO=616;RPL=0;RPP=1401.44;RPPR=1340.64;RPR=644;RUN=1;SAF=644;SAP=1401.44;SAR=0;SRF=616;SRP=1340.64;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:196:83,113:83:3276:113:4407:-184.52,0,-235.909 0/1:337:194,143:194:7645:143:5654:-215.799,0,-586.224 0/1:193:105,88:105:4126:88:3487:-142.927,0,-313.235 0/1:243:123,120:123:4849:120:4764:-223.811,0,-363.171 0/1:131:61,70:61:2412:70:2775:-157.628,0,-177.79 0/1:160:50,110:50:1986:110:4317:-255.472,0,-130.772 dDocent_Contig_3257 12 . A G 947.526 . AB=0.108206;ABP=1481.65;AC=3;AF=0.25;AN=12;AO=178;CIGAR=1X;DP=2179;DPB=2179;DPRA=0;EPP=389.532;EPPR=4343.78;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993497;PAO=0;PQA=0;PQR=0;PRO=0;QA=7130;QR=79297;RO=1999;RPL=0;RPP=389.532;RPPR=4343.78;RPR=178;RUN=1;SAF=178;SAP=389.532;SAR=0;SRF=1999;SRP=4343.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:280:260,20:260:10285:20:803:0,-11.704,-852.432 0/1:358:328,30:328:12962:30:1207:-1.13158,0,-1057.91 0/1:201:170,30:170:6743:30:1189:-46.6689,0,-545.965 0/0:288:276,11:276:10912:11:435:0,-47.2015,-941.884 0/0:502:475,27:475:18961:27:1088:0,-52.9109,-1606.72 0/1:550:490,60:490:19434:60:2408:-51.2959,0,-1581.93 dDocent_Contig_3258 16 . G A 506.807 . AB=0.138889;ABP=329.214;AC=3;AF=0.25;AN=12;AO=46;CIGAR=1X;DP=526;DPB=526;DPRA=0;EPP=102.898;EPPR=1045.32;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99375;PAO=0;PQA=0;PQR=0;PRO=0;QA=1797;QR=18501;RO=480;RPL=0;RPP=102.898;RPPR=1045.32;RPR=46;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=480;SRP=1045.32;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:52,2:52:1952:2:79:0,-8.75837,-168.409 0/1:48:41,7:41:1577:7:273:-10.4861,0,-127.733 0/1:138:115,23:115:4448:23:908:-40.4854,0,-358.786 0/0:51:49,2:49:1902:2:82:0,-7.57285,-163.628 0/1:102:92,10:92:3566:10:392:-4.93093,0,-290.325 0/0:133:131,2:131:5056:2:63:0,-34.0547,-449.013 dDocent_Contig_3259 209 . N G 814.35 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=22;CIGAR=1X;DP=22;DPB=22;DPRA=0;EPP=50.7827;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=875;QR=0;RO=0;RPL=22;RPP=50.7827;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=50.7827;SAR=22;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:163:-15.0584,-1.20412,0 1/1:4:0,4:0:0:4:152:-14.048,-1.20412,0 1/1:4:0,4:0:0:4:164:-15.1499,-1.20412,0 1/1:8:0,8:0:0:8:315:-28.7145,-2.40824,0 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_3260 16 . A G 15751.5 . AB=0.657471;ABP=96.7031;AC=8;AF=0.666667;AN=12;AO=481;CIGAR=1X;DP=630;DPB=630;DPRA=0;EPP=1047.49;EPPR=326.56;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=19032;QR=5920;RO=149;RPL=0;RPP=1047.49;RPPR=326.56;RPR=481;RUN=1;SAF=481;SAP=1047.49;SAR=0;SRF=149;SRP=326.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:110:52,58:52:2047:58:2318:-175.668,0,-151.305 0/1:148:50,98:50:1979:98:3845:-301.5,0,-133.757 0/1:82:14,68:14:569:68:2698:-218.256,0,-26.868 0/1:95:33,62:33:1325:62:2470:-193.841,0,-90.9129 1/1:100:0,100:0:0:100:3970:-357.295,-30.103,0 1/1:95:0,95:0:0:95:3731:-335.816,-28.5979,0 dDocent_Contig_3261 7 . C A 914.836 . AB=0.107768;ABP=1912.57;AC=4;AF=0.333333;AN=12;AO=164;CIGAR=1X;DP=1894;DPB=1894;DPRA=0;EPP=359.132;EPPR=2572.71;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=55.5069;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.878472;PAO=0;PQA=0;PQR=0;PRO=0;QA=6234;QR=65744;RO=1728;RPL=0;RPP=359.132;RPPR=3755.31;RPR=164;RUN=1;SAF=164;SAP=359.132;SAR=0;SRF=1579;SRP=2572.71;SRR=149;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:220:185,35:185:7039:35:1325:-53.3105,0,-553.009 0/0:267:260,7:260:9958:7:264:0,-56.2554,-843.885 0/0:198:194,3:194:7440:3:116:0,-48.7693,-651.437 0/1:276:248,28:248:9448:28:1082:-14.6007,0,-745.297 0/1:542:484,57:484:18329:57:2128:-28.7802,0,-1386.87 0/1:391:357,34:357:13530:34:1319:-1.29393,0,-1022.6 dDocent_Contig_3262 10 . G A 7972.42 . AB=0.673629;ABP=103.301;AC=6;AF=0.5;AN=12;AO=258;CIGAR=1X;DP=383;DPB=383;DPRA=0;EPP=563.25;EPPR=274.444;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.976744;PAIREDR=0.976;PAO=0;PQA=0;PQR=0;PRO=0;QA=10249;QR=4946;RO=125;RPL=0;RPP=563.25;RPPR=274.444;RPR=258;RUN=1;SAF=258;SAP=563.25;SAR=0;SRF=125;SRP=274.444;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:70:33,37:33:1312:37:1447:-109.41,0,-97.2743 0/1:58:19,39:19:752:39:1542:-121.564,0,-50.5362 0/1:48:14,34:14:564:34:1361:-108.297,0,-36.6534 0/1:72:19,53:19:754:53:2117:-169.039,0,-46.5063 0/1:88:23,65:23:916:65:2600:-207.641,0,-56.2512 0/1:47:17,30:17:648:30:1182:-92.5124,0,-44.4867 dDocent_Contig_3263 119 . C T 703.646 . AB=0.276119;ABP=61.3484;AC=3;AF=0.25;AN=12;AO=46;CIGAR=1X;DP=355;DPB=355;DPRA=0;EPP=102.898;EPPR=671.824;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.987013;PAO=0;PQA=0;PQR=0;PRO=0;QA=1566;QR=10359;RO=308;RPL=0;RPP=102.898;RPPR=671.824;RPR=46;RUN=1;SAF=0;SAP=102.898;SAR=46;SRF=0;SRP=671.824;SRR=308;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:27:20,7:20:658:7:245:-14.2634,0,-51.4007 0/0:24:22,2:22:736:2:53:0,-2.19105,-61.5184 0/1:79:63,16:63:2111:16:545:-25.5923,0,-166.478 0/1:28:14,14:14:438:14:487:-35.7307,0,-31.2915 0/0:122:116,5:116:3930:5:167:0,-21.4127,-338.55 0/0:75:73,2:73:2486:2:69:0,-16.0246,-217.449 dDocent_Contig_3264 7 . C T 1499.3 . AB=0.106926;ABP=3103.1;AC=2;AF=0.166667;AN=12;AO=248;CIGAR=1X;DP=4922;DPB=4922;DPRA=1.54762;EPP=541.535;EPPR=10141.6;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.991935;PAIREDR=0.995931;PAO=0;PQA=0;PQR=0;PRO=0;QA=9461;QR=178988;RO=4669;RPL=0;RPP=541.535;RPPR=10141.6;RPR=248;RUN=1;SAF=248;SAP=541.535;SAR=0;SRF=4669;SRP=10141.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:611:609,0:609:23464:0:0:0,-183.327,-2110.15 0/0:680:679,1:679:26036:1:38:0,-200.903,-2337.93 0/0:605:605,0:605:23215:0:0:0,-182.123,-2088.02 0/0:716:716,0:716:27459:0:0:0,-215.537,-2469.68 0/1:1149:1005,142:1005:38517:142:5422:-142.475,0,-3118.6 0/1:1161:1055,105:1055:40297:105:4001:-10.6766,0,-3274.66 dDocent_Contig_3265 11 . T G 14236.9 . AB=0.558195;ABP=27.7785;AC=5;AF=0.416667;AN=12;AO=479;CIGAR=1X;DP=1009;DPB=1009;DPRA=0;EPP=1043.15;EPPR=1151.72;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.995825;PAIREDR=0.99811;PAO=0;PQA=0;PQR=0;PRO=0;QA=19092;QR=21133;RO=529;RPL=0;RPP=1043.15;RPPR=1151.72;RPR=479;RUN=1;SAF=479;SAP=1043.15;SAR=0;SRF=529;SRP=1151.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:204:84,119:84:3343:119:4748:-365.715,0,-239.412 0/1:164:46,118:46:1836:118:4715:-374.894,0,-116.081 0/1:111:34,77:34:1370:77:3060:-242.07,0,-90.1384 0/1:156:62,94:62:2482:94:3747:-290.283,0,-176.556 0/1:207:145,62:145:5762:62:2468:-159.956,0,-456.064 0/0:167:158,9:158:6340:9:354:0,-18.0528,-538.103 dDocent_Contig_3266 19 . G T 4017.85 . AB=0.043454;ABP=3252.74;AC=0;AF=0;AN=12;AO=78;CIGAR=1M1X1M;DP=1795;DPB=1708;DPRA=0;EPP=163.811;EPPR=2690.16;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=59.9241;NS=6;NUMALT=2;ODDS=2.22045e-16;PAIRED=0.217949;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3146;QR=56182;RO=1423;RPL=0;RPP=172.385;RPPR=3093.02;RPR=78;RUN=1;SAF=77;SAP=163.811;SAR=1;SRF=1375;SRP=2690.16;SRR=48;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:240:176,40,21:176:6984:40,21:1576,850:-76.6106,0,-562.831,-59.5032,-504.786,-628.062 0|0:379:332,40,4:332:13143:40,4:1547,160:-27.1001,0,-1067.73,-113.861,-1066.59,-1192.43 0|0:289:231,34,14:231:9175:34,14:1295,572:-36.6587,0,-745.088,-58.9885,-708.123,-810.103 0|0:326:245,55,12:245:9605:55,12:2150,487:-102.992,0,-772.801,-136.578,-749.194,-922.314 0|0:251:205,26,17:205:8068:26,17:1034,683:-23.4366,0,-655.842,-28.8562,-607.388,-687.4 0|0:310:234,66,10:234:9207:66,10:2632,394:-146.208,0,-736.408,-184.237,-723.864,-937.5 dDocent_Contig_3267 19 . A G 106.896 . AB=0.123596;ABP=112.535;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=629;DPB=629;DPRA=1.67836;EPP=42.0968;EPPR=1327.61;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=707;QR=24226;RO=610;RPL=0;RPP=42.0968;RPPR=1327.61;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=610;SRP=1327.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:89:77,11:77:3034:11:427:-11.9114,0,-246.29 0/0:198:191,7:191:7590:7:280:0,-34.0335,-657.162 0/0:44:44,0:44:1760:0:0:0,-13.2453,-158.615 0/0:119:119,0:119:4742:0:0:0,-35.8226,-426.698 0/0:72:72,0:72:2845:0:0:0,-21.6742,-256.158 0/0:107:107,0:107:4255:0:0:0,-32.2102,-382.912 dDocent_Contig_3268 15 . G A 643.992 . AB=0.134177;ABP=462.159;AC=2;AF=0.166667;AN=12;AO=67;CIGAR=1X;DP=1396;DPB=1396;DPRA=0.858855;EPP=148.499;EPPR=2886.73;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996988;PAO=0;PQA=0;PQR=0;PRO=0;QA=2597;QR=52427;RO=1328;RPL=0;RPP=148.499;RPPR=2886.73;RPR=67;RUN=1;SAF=67;SAP=148.499;SAR=0;SRF=1328;SRP=2886.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:250:236,14:236:9293:14:531:0,-27.135,-787.724 0/1:245:214,31:214:8458:31:1223:-36.597,0,-687.028 0/1:150:128,22:128:5067:22:843:-31.024,0,-410.761 0/0:211:211,0:211:8328:0:0:0,-63.5173,-749.091 0/0:319:318,0:318:12505:0:0:0,-95.7275,-1124.42 0/0:221:221,0:221:8776:0:0:0,-66.5276,-789.355 dDocent_Contig_3269 98 . N A 300.269 . AB=0;ABP=0;AC=10;AF=0.833333;AN=12;AO=10;CIGAR=1X;DP=11;DPB=11;DPRA=2;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=308;QR=0;RO=0;RPL=10;RPP=24.725;RPPR=0;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:54:-5.12867,-0.60206,0 0/0:1:0,0:0:0:0:0:0,0,0 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 1/1:1:0,1:0:0:1:20:-1.99996,-0.30103,0 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 1/1:4:0,4:0:0:4:133:-12.2989,-1.20412,0 dDocent_Contig_3270 106 . N G 93.3115 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=2X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=100;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:3:0,3:0:0:3:100:-9.3306,-0.90309,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_3272 11 . G A 48258.5 . AB=0.326007;ABP=1498.43;AC=6;AF=0.5;AN=12;AO=1854;CIGAR=1X;DP=5687;DPB=5687;DPRA=0;EPP=4028.92;EPPR=8261.12;GTI=0;LEN=1;MEANALT=1.83333;MQM=59.0512;MQMR=49.533;NS=6;NUMALT=1;ODDS=0;PAIRED=0.897519;PAIREDR=0.714173;PAO=0;PQA=0;PQR=0;PRO=0;QA=73587;QR=142651;RO=3803;RPL=0;RPP=4028.92;RPPR=8261.12;RPR=1854;RUN=1;SAF=1854;SAP=4028.92;SAR=0;SRF=3803;SRP=8261.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:951:605,333:605:22500:333:13207:-895.028,0,-1538.81 0/1:1288:913,362:913:33927:362:14299:-876.229,0,-2359.42 0/1:696:509,187:509:19654:187:7425:-453.769,0,-1411.88 0/1:1140:825,312:825:30753:312:12355:-754.238,0,-2198.58 0/1:798:506,291:506:19071:291:11559:-781.014,0,-1358.36 0/1:814:445,369:445:16746:369:14742:-1076.79,0,-1100.81 dDocent_Contig_3275 15 . A T 1454.89 . AB=0.17161;ABP=445.126;AC=4;AF=0.333333;AN=12;AO=81;CIGAR=1X;DP=778;DPB=778;DPRA=0.771242;EPP=178.9;EPPR=1516.53;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.985653;PAO=0;PQA=0;PQR=0;PRO=0;QA=3261;QR=27662;RO=697;RPL=0;RPP=178.9;RPPR=1516.53;RPR=81;RUN=1;SAF=81;SAP=178.9;SAR=0;SRF=697;SRP=1516.53;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:123:87,36:87:3435:36:1455:-94.1714,0,-272.177 0/1:130:105,25:105:4184:25:998:-50.9838,0,-337.404 0/1:105:95,10:95:3766:10:406:-5.29246,0,-307.338 0/1:114:104,10:104:4145:10:402:-2.22208,0,-338.712 0/0:112:112,0:112:4432:0:0:0,-33.7154,-398.834 0/0:194:194,0:194:7700:0:0:0,-58.3998,-692.615 dDocent_Contig_3276 9 . T C 6949.82 . AB=0.608924;ABP=42.2735;AC=6;AF=0.5;AN=12;AO=232;CIGAR=1X2M3X;DP=381;DPB=381;DPRA=0;EPP=506.792;EPPR=326.56;GTI=0;LEN=1;MEANALT=1;MQM=59.9612;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.431034;PAIREDR=0.536913;PAO=0;PQA=0;PQR=0;PRO=0;QA=9104;QR=5782;RO=149;RPL=0;RPP=506.792;RPPR=326.56;RPR=232;RUN=1;SAF=232;SAP=506.792;SAR=0;SRF=149;SRP=326.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:79:27,52:27:1034:52:2030:-159.117,0,-69.5769 0|1:68:34,34:34:1316:34:1347:-101.033,0,-98.2469 0|1:48:19,29:19:738:29:1150:-89.3407,0,-52.2998 0|1:53:19,34:19:739:34:1338:-104.74,0,-50.8829 0|1:67:32,35:32:1258:35:1366:-103.042,0,-93.3342 0|1:66:18,48:18:697:48:1873:-148.932,0,-43.1892 dDocent_Contig_3277 98 . N T 72.1489 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=72;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:60:-5.6988,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:12:-1.19999,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_3278 13 . A T 3998.41 . AB=0.0596026;ABP=257.389;AC=0;AF=0;AN=12;AO=9;CIGAR=1M2D3X2M1X;DP=450;DPB=448;DPRA=0;EPP=22.5536;EPPR=624.051;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.555556;PAIREDR=0.762238;PAO=0;PQA=0;PQR=0;PRO=0;QA=355;QR=11219;RO=286;RPL=0;RPP=22.5536;RPPR=624.051;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=286;SRP=624.051;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:73:58,0,14:58:2287:0,14:0,568:-29.3789,-46.8386,-234.989,0,-188.144,-183.929 0|0:74:48,0,26:48:1883:0,26:0,1056:-73.0512,-87.5007,-242.342,0,-155.242,-147.416 0|0:69:49,0,20:49:1918:0,20:0,805:-51.997,-66.7475,-224.436,0,-158.087,-152.067 0|0:83:56,0,25:56:2207:0,25:0,1008:-66.2827,-83.1404,-264.708,0,-181.618,-174.092 0|0:92:48,5,38:48:1857:5,38:199,1500:-108.947,-107.01,-258.019,0,-136.122,-141.069 0|0:59:27,4,27:27:1067:4,27:156,1086:-81.4064,-76.7124,-163.311,0,-75.0105,-79.7054 dDocent_Contig_3279 98 . N C 137.821 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=135;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:27:-2.69978,-0.30103,0 1/1:2:0,2:0:0:2:68:-6.45788,-0.60206,0 dDocent_Contig_3280 13 . T G 611.753 . AB=0.215278;ABP=104.406;AC=3;AF=0.25;AN=12;AO=31;CIGAR=1X;DP=267;DPB=267;DPRA=1.17073;EPP=70.3259;EPPR=515.478;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.193548;PAIREDR=0.567797;PAO=0;PQA=0;PQR=0;PRO=0;QA=1208;QR=9486;RO=236;RPL=0;RPP=70.3259;RPPR=515.478;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=236;SRP=515.478;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:29,7:29:1171:7:240:-11.086,0,-94.8297 0/1:76:60,16:60:2406:16:644:-35.4153,0,-193.808 0/0:24:24,0:24:959:0:0:0,-7.22472,-86.6096 0/1:32:24,8:24:949:8:324:-19.8959,0,-76.076 0/0:56:56,0:56:2265:0:0:0,-16.8577,-204.006 0/0:43:43,0:43:1736:0:0:0,-12.9443,-156.455 dDocent_Contig_3281 19 . T C 13925.2 . AB=0.185626;ABP=3323.45;AC=6;AF=0.5;AN=12;AO=718;CIGAR=1M3D2M1X2M4I2M;DP=3868;DPB=3933.27;DPRA=0;EPP=1562.13;EPPR=6291.59;GTI=0;LEN=1;MEANALT=5.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=27706;QR=113213;RO=2896;RPL=0;RPP=1562.13;RPPR=6291.59;RPR=718;RUN=1;SAF=718;SAP=1562.13;SAR=0;SRF=2896;SRP=6291.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:560:457,89,0:457:17848:89,0:3437,0:-144.728,0,-1440.46,-282.299,-1467.26,-1749.54 0|1:615:527,83,0:527:20585:83,0:3194,0:-103.793,0,-1667.47,-262.436,-1692.46,-1954.7 0|1:550:456,77,0:456:17857:77,0:2960,0:-105.745,0,-1445.15,-243.015,-1468.33,-1711.33 0|1:617:535,76,0:535:20907:76,0:2937,0:-80.1644,0,-1695.9,-241.215,-1718.77,-1960 0|1:739:471,143,122:471:18385:143,122:5530,4930:-312.441,0,-1468.24,-47.7784,-1104.84,-1522.35 0|1:787:450,250,84:450:17631:250,84:9648,3376:-656.87,0,-1374.53,-514.136,-1171.59,-1938.65 dDocent_Contig_3282 19 . A T 58797.4 . AB=0.777564;ABP=1046.93;AC=7;AF=0.583333;AN=12;AO=1770;CIGAR=1X;DP=2117;DPB=2117;DPRA=0;EPP=3846.52;EPPR=754.34;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0.99209;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=70708;QR=13674;RO=346;RPL=0;RPP=3846.52;RPPR=754.34;RPR=1770;RUN=1;SAF=1770;SAP=3846.52;SAR=0;SRF=346;SRP=754.34;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:247:55,192:55:2155:192:7658:-614.459,0,-119.79 0/1:334:96,237:96:3811:237:9451:-749.349,0,-242.359 0/1:292:76,216:76:3015:216:8590:-684.703,0,-183.533 0/1:340:71,269:71:2829:269:10728:-862.448,0,-152.371 1/1:557:0,557:0:0:557:22305:-2005.5,-167.674,0 0/1:347:48,299:48:1864:299:11976:-972.507,0,-63.515 dDocent_Contig_3283 39 . C A 146.093 . AB=0.152941;ABP=91.9385;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=547;DPB=547;DPRA=0.886544;EPP=35.5824;EPPR=1158.23;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=541;QR=20978;RO=532;RPL=0;RPP=35.5824;RPPR=1158.23;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=532;SRP=1158.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:52:52,0:52:2060:0:0:0,-15.6536,-185.579 0/0:146:146,0:146:5807:0:0:0,-43.9504,-522.434 0/0:99:99,0:99:3891:0:0:0,-29.802,-350.201 0/0:82:82,0:82:3210:0:0:0,-24.6845,-288.978 0/0:83:81,2:81:3171:2:81:0,-17.2998,-277.794 0/1:85:72,13:72:2839:13:460:-16.1321,0,-230.043 dDocent_Contig_3284 15 . C T 1216.48 . AB=0.178771;ABP=323.879;AC=2;AF=0.166667;AN=12;AO=79;CIGAR=1X;DP=1131;DPB=1131;DPRA=2.062;EPP=174.557;EPPR=2287.4;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.973384;PAO=0;PQA=0;PQR=0;PRO=0;QA=3169;QR=42020;RO=1052;RPL=0;RPP=174.557;RPPR=2287.4;RPR=79;RUN=1;SAF=79;SAP=174.557;SAR=0;SRF=1052;SRP=2287.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:199:192,7:192:7689:7:273:0,-34.9689,-666.676 0/0:249:248,1:248:9949:1:38:0,-71.1592,-890.975 0/0:100:100,0:100:4000:0:0:0,-30.103,-359.985 0/0:225:218,7:218:8636:7:279:0,-42.2515,-751.284 0/1:158:134,24:134:5349:24:961:-39.2281,0,-433.701 0/1:200:160,40:160:6397:40:1618:-85.6418,0,-515.255 dDocent_Contig_3285 24 . T A 66.5543 . AB=0.11236;ABP=119.172;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=413;DPB=413;DPRA=0.795181;EPP=37.7539;EPPR=865.085;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.97733;PAO=0;PQA=0;PQR=0;PRO=0;QA=611;QR=15761;RO=397;RPL=0;RPP=37.7539;RPPR=865.085;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=397;SRP=865.085;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:75:74,1:74:2902:1:41:0,-18.4827,-257.189 0/0:83:83,0:83:3294:0:0:0,-24.9855,-296.505 0/1:34:30,4:30:1218:4:162:-4.73173,0,-99.6547 0/1:55:49,6:49:1964:6:237:-5.14536,0,-160.393 0/0:93:90,3:90:3530:3:91:0,-19.5116,-309.25 0/0:73:71,2:71:2853:2:80:0,-14.3834,-249.28 dDocent_Contig_3286 16 . A G 291.457 . AB=0.229508;ABP=41.7764;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=306;DPB=306;DPRA=1.2449;EPP=33.4109;EPPR=637.08;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0;PAIREDR=0.136986;PAO=0;PQA=0;PQR=0;PRO=0;QA=541;QR=11286;RO=292;RPL=0;RPP=33.4109;RPPR=637.08;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=292;SRP=637.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:36,0:36:1377:0:0:0,-10.8371,-124.207 0/0:61:61,0:61:2367:0:0:0,-18.3628,-213.229 0/0:29:29,0:29:1135:0:0:0,-8.72987,-102.444 0/1:61:47,14:47:1838:14:541:-30.6686,0,-147.292 0/0:48:48,0:48:1856:0:0:0,-14.4494,-167.269 0/0:71:71,0:71:2713:0:0:0,-21.3731,-244.339 dDocent_Contig_3287 46 . C T 924.774 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=146;CIGAR=1X;DP=147;DPB=147;DPRA=0;EPP=320.045;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=7;MQMR=7;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5445;QR=34;RO=1;RPL=146;RPP=320.045;RPPR=5.18177;RPR=0;RUN=1;SAF=146;SAP=320.045;SAR=0;SRF=1;SRP=5.18177;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:11:0,11:0:0:11:401:-6.9953,-3.31133,0 1/1:28:0,28:0:0:28:1056:-17.7006,-8.42884,0 1/1:14:0,14:0:0:14:524:-8.88165,-4.21442,0 1/1:27:0,27:0:0:27:967:-17.0537,-8.12781,0 1/1:28:1,27:1:34:27:1017:-16.372,-7.72953,0 1/1:39:0,39:0:0:39:1480:-24.629,-11.7402,0 dDocent_Contig_3288 18 . T C 5091.47 . AB=0.778626;ABP=91.3445;AC=8;AF=0.666667;AN=12;AO=178;CIGAR=1X2M1X;DP=220;DPB=220;DPRA=0;EPP=389.532;EPPR=48.6112;GTI=0;LEN=1;MEANALT=2.5;MQM=41.5;MQMR=48.5238;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6993;QR=829;RO=21;RPL=0;RPP=389.532;RPPR=48.6112;RPR=178;RUN=1;SAF=178;SAP=389.532;SAR=0;SRF=21;SRP=48.6112;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:54:8,44,2:8:315:44,2:1743,81:-118.826,0,-12.3281,-115.235,-19.5795,-140.196 1|1:50:4,43,2:4:155:43,2:1678,81:-124.048,-0.619839,0,-120.876,-8.58681,-132.543 1|0:19:0,16,3:0:0:16,3:616,121:-47.6808,-9.34474,-4.52826,-38.6916,0,-37.7885 1|0:31:2,26,3:2:80:26,3:1024,116:-75.6561,-2.05627,-0.625059,-67.7824,0,-73.2613 1|1:39:2,33,2:2:80:33,2:1306,82:-101.951,-3.51972,0,-98.9808,-6.40154,-104.763 0|1:27:5,16,6:5:199:16,6:626,231:-46.8287,0,-11.3284,-43.249,-11.1371,-57.4744 dDocent_Contig_3292 21 . G A 706.662 . AB=0.785714;ABP=12.937;AC=10;AF=0.833333;AN=12;AO=28;CIGAR=1X;DP=31;DPB=31;DPRA=0;EPP=63.8115;EPPR=9.52472;GTI=0;LEN=1;MEANALT=1;MQM=44.0714;MQMR=41.6667;NS=6;NUMALT=1;ODDS=0;PAIRED=0.785714;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1011;QR=113;RO=3;RPL=0;RPP=63.8115;RPPR=9.52472;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=3;SRP=9.52472;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:6:1,5:1:38:5:173:-9.10732,0,-1.99109 1/1:7:0,7:0:0:7:250:-20.2872,-2.10721,0 1/1:1:0,1:0:0:1:37:-0.899399,-0.30103,0 1/1:2:0,2:0:0:2:74:-7.02588,-0.60206,0 0/1:8:2,6:2:75:6:220:-17.6886,0,-1.76827 1/1:7:0,7:0:0:7:257:-18.4776,-2.10721,0 dDocent_Contig_3299 11 . A G 252.441 . AB=0.147826;ABP=126.898;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=808;DPB=808;DPRA=0.916968;EPP=42.0968;EPPR=1716.3;GTI=0;LEN=1;MEANALT=1;MQM=59.3333;MQMR=59.9772;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=689;QR=30979;RO=789;RPL=0;RPP=42.0968;RPPR=1716.3;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=789;SRP=1716.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:130:130,0:130:5095:0:0:0,-39.1339,-458.454 0/0:171:171,0:171:6712:0:0:0,-51.4761,-603.837 0/0:117:116,0:116:4551:0:0:0,-34.9195,-409.226 0/0:139:138,1:138:5397:1:10:0,-40.8432,-484.62 0/0:136:136,0:136:5357:0:0:0,-40.9401,-482.02 0/1:115:98,17:98:3867:17:679:-26.767,0,-313.433 dDocent_Contig_3300 20 . C T 1351.76 . AB=0.233129;ABP=204.677;AC=5;AF=0.416667;AN=12;AO=83;CIGAR=1X;DP=505;DPB=505;DPRA=0;EPP=22.0826;EPPR=919.372;GTI=0;LEN=1;MEANALT=1;MQM=46.2771;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.349398;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3137;QR=16959;RO=422;RPL=0;RPP=183.243;RPPR=919.372;RPR=83;RUN=1;SAF=55;SAP=22.0826;SAR=28;SRF=422;SRP=919.372;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:53:40,13:40:1597:13:499:-21.0414,0,-128.003 0/1:52:42,10:42:1661:10:377:-13.3142,0,-134.057 0/1:42:21,21:21:854:21:804:-55.0988,0,-64.5262 0/1:89:66,23:66:2660:23:899:-52.9348,0,-212.721 0/0:179:172,7:172:6927:7:244:0,-31.7826,-600.978 0/1:90:81,9:81:3260:9:314:-1.10325,0,-266.354 dDocent_Contig_3301 80 . G T 600.085 . AB=0.188889;ABP=154.338;AC=3;AF=0.25;AN=12;AO=39;CIGAR=1X;DP=337;DPB=337;DPRA=1.25521;EPP=87.6977;EPPR=650.109;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.846154;PAIREDR=0.885906;PAO=0;PQA=0;PQR=0;PRO=0;QA=1510;QR=11432;RO=298;RPL=0;RPP=87.6977;RPPR=650.109;RPR=39;RUN=1;SAF=0;SAP=87.6977;SAR=39;SRF=0;SRP=650.109;SRR=298;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:61:56,5:56:2135:5:195:0,-0.438633,-174.439 0/1:43:30,13:30:1141:13:503:-32.6745,0,-90.0437 0/1:77:62,15:62:2384:15:578:-29.1831,0,-191.579 0/1:60:54,6:54:2060:6:234:-3.3693,0,-167.565 0/0:49:49,0:49:1890:0:0:0,-14.7505,-170.342 0/0:47:47,0:47:1822:0:0:0,-14.1484,-164.227 dDocent_Contig_3302 67 . G A 155.162 . AB=0.148936;ABP=103.637;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=433;DPB=433;DPRA=1.4502;EPP=37.7539;EPPR=908.514;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.875;PAIREDR=0.63789;PAO=0;PQA=0;PQR=0;PRO=0;QA=570;QR=14607;RO=417;RPL=9;RPP=3.55317;RPPR=71.8777;RPR=7;RUN=1;SAF=9;SAP=3.55317;SAR=7;SRF=266;SRP=71.8777;SRR=151;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:49:49,0:49:1693:0:0:0,-14.7505,-152.659 0/0:88:86,2:86:2888:2:70:0,-19.8433,-253.515 0/0:65:65,0:65:2305:0:0:0,-19.5669,-207.705 0/1:94:80,14:80:2854:14:500:-17.0391,0,-228.793 0/0:51:51,0:51:1773:0:0:0,-15.3525,-159.856 0/0:86:86,0:86:3094:0:0:0,-25.8886,-278.68 dDocent_Contig_3303 73 . T G 195.739 . AB=0.193548;ABP=53.5846;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=365;DPB=365;DPRA=1.0231;EPP=29.068;EPPR=765.197;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.85755;PAO=0;PQA=0;PQR=0;PRO=0;QA=438;QR=12754;RO=351;RPL=5;RPP=3.73412;RPPR=3.75887;RPR=7;RUN=1;SAF=5;SAP=3.73412;SAR=7;SRF=170;SRP=3.75887;SRR=181;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:57:55,0:55:2032:0:0:0,-16.5566,-182.742 0/0:57:57,0:57:2063:0:0:0,-17.1587,-185.918 0/0:51:51,0:51:1765:0:0:0,-15.3525,-159.085 0/1:62:50,12:50:1881:12:438:-21.0968,0,-150.862 0/0:50:50,0:50:1791:0:0:0,-15.0515,-161.446 0/0:88:88,0:88:3222:0:0:0,-26.4906,-290.154 dDocent_Contig_3304 9 . C T 258.077 . AB=0.128205;ABP=237.14;AC=2;AF=0.166667;AN=12;AO=38;CIGAR=1X;DP=457;DPB=457;DPRA=0;EPP=85.5263;EPPR=912.857;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.657895;PAIREDR=0.498807;PAO=0;PQA=0;PQR=0;PRO=0;QA=1473;QR=16212;RO=419;RPL=0;RPP=85.5263;RPPR=912.857;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=419;SRP=912.857;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:68:64,4:64:2467:4:156:0,-6.05275,-207.813 0/0:85:82,3:82:3175:3:116:0,-14.7698,-275.078 0/0:43:40,3:40:1536:3:117:0,-2.03391,-127.599 0/0:66:63,3:63:2448:3:117:0,-8.9576,-209.609 0/1:113:97,16:97:3752:16:618:-21.9432,0,-303.767 0/1:82:73,9:73:2834:9:349:-7.0863,0,-230.544 dDocent_Contig_3305 45 . A C 2852.24 . AB=0.155417;ABP=1164.3;AC=5;AF=0.416667;AN=12;AO=184;CIGAR=1X;DP=1294;DPB=1294;DPRA=0;EPP=402.561;EPPR=2413.34;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9946;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.983696;PAIREDR=0.991892;PAO=0;PQA=0;PQR=0;PRO=0;QA=7391;QR=44317;RO=1110;RPL=0;RPP=402.561;RPPR=2413.34;RPR=184;RUN=1;SAF=184;SAP=402.561;SAR=0;SRF=1110;SRP=2413.34;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:168:159,9:159:6355:9:367:0,-17.1778,-538.288 0/1:244:216,28:216:8628:28:1132:-28.7095,0,-702.568 0/1:100:86,14:86:3433:14:558:-20.4588,0,-278.91 0/1:201:182,19:182:7314:19:761:-8.30404,0,-597.352 0/1:267:239,28:239:9499:28:1115:-20.2534,0,-773.965 0/1:314:228,86:228:9088:86:3458:-216.72,0,-722.843 dDocent_Contig_3306 54 . T A 96.3345 . AB=0.102273;ABP=244.833;AC=1;AF=0.0833333;AN=12;AO=31;CIGAR=1X;DP=1141;DPB=1141;DPRA=0.823318;EPP=70.3259;EPPR=2413.34;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.935484;PAIREDR=0.977477;PAO=0;PQA=0;PQR=0;PRO=0;QA=1197;QR=44019;RO=1110;RPL=31;RPP=70.3259;RPPR=2413.34;RPR=0;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=1110;SRP=2413.34;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:174:171,3:171:6752:3:120:0,-41.1913,-596.206 0/0:176:173,3:173:6899:3:117:0,-42.072,-609.7 0/0:145:141,4:141:5630:4:129:0,-31.7294,-494.597 0/1:176:158,18:158:6277:18:709:-11.1563,0,-511.704 0/0:223:223,0:223:8819:0:0:0,-67.1297,-793.227 0/0:247:244,3:244:9642:3:122:0,-62.9819,-855.838 dDocent_Contig_3307 28 . A G 1590.62 . AB=0.176471;ABP=451.228;AC=3;AF=0.25;AN=12;AO=99;CIGAR=1X;DP=888;DPB=888;DPRA=0;EPP=217.986;EPPR=1698.97;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.980989;PAO=0;PQA=0;PQR=0;PRO=0;QA=3919;QR=31301;RO=789;RPL=0;RPP=217.986;RPPR=1716.3;RPR=99;RUN=1;SAF=99;SAP=217.986;SAR=0;SRF=787;SRP=1698.97;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:127:114,13:114:4512:13:514:-8.37577,0,-367.793 0/0:121:120,1:120:4787:1:41:0,-32.3301,-426.634 0/0:83:76,7:76:3007:7:262:0,-1.05572,-246.793 0/0:191:187,4:187:7414:4:151:0,-43.5399,-652.949 0/1:197:158,39:158:6279:39:1544:-79.8984,0,-505.563 0/1:169:134,35:134:5302:35:1407:-76.01,0,-426.162 dDocent_Contig_3308 23 . A G 205.747 . AB=0.137615;ABP=127.342;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=1X;DP=707;DPB=707;DPRA=1.12312;EPP=57.2971;EPPR=1483.95;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998534;PAO=0;PQA=0;PQR=0;PRO=0;QA=1002;QR=27143;RO=682;RPL=0;RPP=57.2971;RPPR=1483.95;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=682;SRP=1483.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:109:94,15:94:3745:15:603:-21.7966,0,-304.247 0/0:172:172,0:172:6824:0:0:0,-51.7772,-613.857 0/0:151:149,2:149:5925:2:81:0,-37.7698,-525.351 0/0:114:106,8:106:4245:8:318:0,-5.33257,-353.016 0/0:88:88,0:88:3513:0:0:0,-26.4906,-316.202 0/0:73:73,0:73:2891:0:0:0,-21.9752,-260.297 dDocent_Contig_3309 12 . A T 180.307 . AB=0.103846;ABP=357.428;AC=1;AF=0.0833333;AN=12;AO=113;CIGAR=2X;DP=1851;DPB=1851;DPRA=0;EPP=248.387;EPPR=3777.03;GTI=0;LEN=1;MEANALT=1;MQM=56.4867;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.982301;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4525;QR=68719;RO=1738;RPL=0;RPP=248.387;RPPR=3777.03;RPR=113;RUN=1;SAF=113;SAP=248.387;SAR=0;SRF=1738;SRP=3777.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:218:215,3:215:8462:3:120:0,-54.44,-749.975 0|1:260:233,27:233:9187:27:1084:-19.5536,0,-748.078 0|0:161:154,7:154:6124:7:280:0,-22.9018,-525.384 0|0:258:240,18:240:9504:18:729:0,-18.2829,-795.431 0|0:527:492,35:492:19458:35:1395:0,-36.2467,-1627.31 0|0:427:404,23:404:15984:23:917:0,-47.788,-1356.64 dDocent_Contig_3310 107 . N T 64.5902 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=68;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_3311 98 . N A 1460.57 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=49;CIGAR=1X;DP=49;DPB=49;DPRA=0;EPP=109.412;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1594;QR=0;RO=0;RPL=49;RPP=109.412;RPPR=0;RPR=0;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 1/1:3:0,3:0:0:3:58:-5.41298,-0.90309,0 1/1:16:0,16:0:0:16:540:-48.922,-4.81648,0 1/1:26:0,26:0:0:26:862:-77.887,-7.82678,0 dDocent_Contig_3312 43 . G A 30.1924 . AB=0.130435;ABP=30.2953;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=194;DPB=194;DPRA=1.425;EPP=22.5536;EPPR=396.094;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.816216;PAO=0;PQA=0;PQR=0;PRO=0;QA=363;QR=7338;RO=185;RPL=0;RPP=22.5536;RPPR=404.733;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=184;SRP=396.094;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:872:0:0:0,-6.62266,-78.7876 0/0:30:29,1:29:1150:1:41:0,-4.93633,-99.6908 0/0:25:25,0:25:1003:0:0:0,-7.52575,-90.5649 0/0:33:33,0:33:1316:0:0:0,-9.93399,-118.702 0/0:61:56,5:56:2247:5:199:0,-0.0742658,-184.102 0/1:23:20,3:20:750:3:123:-4.5411,0,-60.8795 dDocent_Contig_3313 13 . G A 147.64 . AB=0.112299;ABP=247.156;AC=1;AF=0.0833333;AN=12;AO=31;CIGAR=1X;DP=1107;DPB=1107;DPRA=1.58083;EPP=70.3259;EPPR=2339.51;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992565;PAO=0;PQA=0;PQR=0;PRO=0;QA=1185;QR=43141;RO=1076;RPL=0;RPP=70.3259;RPPR=2339.51;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=1076;SRP=2339.51;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:144:144,0:144:5773:0:0:0,-43.3483,-519.348 0/0:252:244,8:244:9744:8:301:0,-48.4154,-848.883 0/0:122:122,0:122:4931:0:0:0,-36.7257,-443.644 0/1:187:166,21:166:6660:21:803:-16.2869,0,-542.794 0/0:203:202,1:202:8072:1:40:0,-57.1134,-722.027 0/0:199:198,1:198:7961:1:41:0,-55.8104,-711.929 dDocent_Contig_3314 13 . T C 943.478 . AB=0.242775;ABP=102.434;AC=3;AF=0.25;AN=12;AO=44;CIGAR=1X;DP=316;DPB=316;DPRA=1.45062;EPP=98.5551;EPPR=589.308;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.954545;PAIREDR=0.937037;PAO=0;PQA=0;PQR=0;PRO=0;QA=1746;QR=10905;RO=270;RPL=0;RPP=98.5551;RPPR=589.308;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=270;SRP=589.308;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:61:53,8:53:2134:8:301:-9.07581,0,-173.871 0/0:48:47,0:47:1899:0:0:0,-14.1484,-170.697 0/0:33:33,0:33:1342:0:0:0,-9.93399,-121.035 0/1:80:50,30:50:2014:30:1208:-84.9097,0,-157.367 0/0:62:60,2:60:2427:2:73:0,-11.7347,-211.637 0/1:32:27,4:27:1089:4:164:-5.58408,0,-88.7667 dDocent_Contig_3315 12 . A T 1329.75 . AB=0.210526;ABP=224.272;AC=6;AF=0.5;AN=12;AO=64;CIGAR=1X;DP=304;DPB=304;DPRA=0;EPP=141.985;EPPR=521.992;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.78125;PAIREDR=0.702929;PAO=0;PQA=0;PQR=0;PRO=0;QA=2595;QR=9526;RO=239;RPL=0;RPP=141.985;RPPR=521.992;RPR=64;RUN=1;SAF=64;SAP=141.985;SAR=0;SRF=239;SRP=521.992;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:56:41,15:41:1624:15:607:-38.1093,0,-129.539 0/1:67:55,12:55:2193:12:486:-23.9217,0,-177.375 0/1:34:25,9:25:994:9:368:-23.2503,0,-79.5228 0/1:43:33,10:33:1332:10:404:-23.7747,0,-107.197 0/1:49:42,7:42:1667:7:283:-11.0925,0,-135.508 0/1:55:43,11:43:1716:11:447:-24.0481,0,-138.133 dDocent_Contig_3316 53 . T C 6759.02 . AB=0.248485;ABP=637.646;AC=2;AF=0.166667;AN=12;AO=291;CIGAR=1X;DP=3671;DPB=3671;DPRA=1.01703;EPP=634.909;EPPR=7327.39;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=59.9941;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999704;PAO=0;PQA=0;PQR=0;PRO=0;QA=11574;QR=128690;RO=3373;RPL=291;RPP=634.909;RPPR=7327.39;RPR=0;RUN=1;SAF=291;SAP=634.909;SAR=0;SRF=3373;SRP=7327.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:640:638,0:638:24259:0:0:0,-192.057,-2181.33 0/0:696:691,4:691:26535:4:163:0,-194.479,-2371.29 0/0:485:484,0:484:18389:0:0:0,-145.699,-1653.51 0/0:695:693,0:693:26387:0:0:0,-208.614,-2372.84 0/1:718:518,200:518:19739:200:7935:-497.593,0,-1559.16 0/1:437:349,87:349:13381:87:3476:-181.532,0,-1072.21 dDocent_Contig_3317 8 . T C 3891.81 . AB=0.182353;ABP=1045.93;AC=1;AF=0.0833333;AN=12;AO=391;CIGAR=1X;DP=5548;DPB=5548;DPRA=0;EPP=852.056;EPPR=11197;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998642;PAO=0;PQA=0;PQR=0;PRO=0;QA=14996;QR=197401;RO=5155;RPL=0;RPP=852.056;RPPR=11197;RPR=391;RUN=1;SAF=391;SAP=852.056;SAR=0;SRF=5155;SRP=11197;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:796:783,13:783:30044:13:500:0,-194.272,-2656.81 0/0:995:986,9:986:37768:9:349:0,-267.754,-3364.99 0/0:631:626,4:626:23917:4:156:0,-175.621,-2136.77 0/0:874:815,59:815:31185:59:2267:0,-58.8536,-2600.54 0/1:1190:973,217:973:37251:217:8324:-390.704,0,-2992.04 0/0:1062:972,89:972:37236:89:3400:0,-13.645,-3042.79 dDocent_Contig_3318 29 . C A 109307 . AB=0.903101;ABP=731.278;AC=11;AF=0.916667;AN=12;AO=3213;CIGAR=1X;DP=3351;DPB=3351;DPRA=0;EPP=6979.95;EPPR=302.673;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=126823;QR=5518;RO=138;RPL=0;RPP=6979.95;RPPR=302.673;RPR=3213;RUN=1;SAF=3213;SAP=6979.95;SAR=0;SRF=138;SRP=302.673;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:504:26,478:26:1039:478:18979:-1612.8,-57.9196,0 1/1:595:35,560:35:1373:560:22107:-1864.01,-55.2898,0 0/1:516:50,466:50:2009:466:18467:-1505.23,0,-25.6648 1/1:504:27,477:27:1097:477:18722:-1584.52,-52.7057,0 1/1:627:0,627:0:0:627:24660:-2217.37,-188.746,0 1/1:605:0,605:0:0:605:23888:-2147.97,-182.123,0 dDocent_Contig_3320 52 . G A 22258.1 . AB=0.818182;ABP=457.638;AC=8;AF=0.666667;AN=12;AO=676;CIGAR=1X;DP=773;DPB=773;DPRA=0;EPP=1470.93;EPPR=209.3;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=26655;QR=3748;RO=95;RPL=676;RPP=1470.93;RPPR=209.3;RPR=0;RUN=1;SAF=676;SAP=1470.93;SAR=0;SRF=95;SRP=209.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:119:21,98:21:831:98:3886:-313.932,0,-39.2804 0/1:131:14,115:14:552:115:4535:-369.163,0,-11.0613 0/1:177:35,142:35:1384:142:5609:-451.365,0,-71.5351 0/1:90:22,68:22:868:68:2728:-218.546,0,-51.3404 1/1:125:0,125:0:0:125:4866:-437.872,-37.6288,0 1/1:131:3,128:3:113:128:5031:-442.154,-28.8973,0 dDocent_Contig_3321 15 . C T 1174.55 . AB=0.173745;ABP=242.468;AC=4;AF=0.333334;AN=12;AO=47;CIGAR=1X1M;DP=553;DPB=553;DPRA=0.644275;EPP=105.07;EPPR=1014.99;GTI=0;LEN=1;MEANALT=1.8;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.989451;PAO=0;PQA=0;PQR=0;PRO=0;QA=1856;QR=18792;RO=474;RPL=0;RPP=105.07;RPPR=1032.29;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=472;SRP=1014.99;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:41:29,3,9:29:1153:3,9:122,363:-21.1893,-19.8551,-113.874,0,-84.8539,-92.2087 0|1:64:54,8,2:54:2145:8,2:306,82:-8.82893,0,-174.161,-18.3109,-169.801,-194.303 0|1:55:36,12,7:36:1422:12,7:467,285:-27.5251,0,-113.386,-14.845,-93.4857,-129.751 0|1:99:63,9,27:63:2510:9,27:344,1048:-67.1331,-57.8787,-261.861,0,-178.48,-198.571 0|0:163:161,0,2:161:6391:0,2:0,78:0,-48.4658,-574.563,-41.6651,-568.152,-567.55 0|0:131:131,0,0:131:5171:0,0:0,0:0,-39.4349,-465.278,-39.4349,-465.278,-465.278 dDocent_Contig_3322 10 . T A 11640.9 . AB=0.239886;ABP=1237.73;AC=6;AF=0.5;AN=12;AO=504;CIGAR=1X;DP=2101;DPB=2101;DPRA=0;EPP=1097.43;EPPR=3470.85;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8284;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998016;PAIREDR=0.991234;PAO=0;PQA=0;PQR=0;PRO=0;QA=20083;QR=63761;RO=1597;RPL=0;RPP=1097.43;RPPR=3470.85;RPR=504;RUN=1;SAF=504;SAP=1097.43;SAR=0;SRF=1597;SRP=3470.85;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:291:246,45:246:9819:45:1795:-74.1553,0,-795.48 0/1:400:344,56:344:13680:56:2218:-79.3798,0,-1109.77 0/1:312:238,74:238:9557:74:2921:-169.073,0,-765.593 0/1:377:319,58:319:12736:58:2320:-95.4681,0,-1031.83 0/1:331:189,142:189:7540:142:5670:-410.468,0,-574.209 0/1:390:261,129:261:10429:129:5159:-346.77,0,-820.53 dDocent_Contig_3323 16 . T C 215.601 . AB=0.123377;ABP=192.746;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1X;DP=495;DPB=495;DPRA=2.25806;EPP=44.2683;EPPR=1036.63;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.989496;PAO=0;PQA=0;PQR=0;PRO=0;QA=768;QR=18823;RO=476;RPL=0;RPP=44.2683;RPPR=1036.63;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=476;SRP=1036.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:75:75,0:75:3006:0:0:0,-22.5772,-270.622 0/0:43:43,0:43:1710:0:0:0,-12.9443,-154.119 0/0:36:36,0:36:1388:0:0:0,-10.8371,-125.175 0/0:50:50,0:50:1978:0:0:0,-15.0515,-178.208 0/0:137:137,0:137:5398:0:0:0,-41.2411,-485.678 0/1:154:135,19:135:5343:19:768:-23.083,0,-434.359 dDocent_Contig_3324 40 . T A 867.27 . AB=0.0909091;ABP=66.97;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=8M1X4M;DP=198;DPB=199.462;DPRA=0;EPP=11.6962;EPPR=287.473;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.992366;PAO=0;PQA=0;PQR=0;PRO=0;QA=161;QR=5056;RO=131;RPL=0;RPP=11.6962;RPPR=287.473;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=131;SRP=287.473;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:38:30,3,0,4,0:30:1139:3,0,4,0:110,0,160,0:-4.16185,-4.2146,-96.6866,-13.1928,-97.5897,-106.579,0,-84.4071,-93.3965,-92.1924,-13.1928,-97.5897,-106.579,-93.3965,-106.579 0|0:48:33,1,7,7,0:33:1276:1,7,7,0:40,281,253,0:-13.2365,-19.8742,-124.379,0,-101.523,-102.712,-2.54615,-104.042,-84.1804,-105.23,-23.1705,-124.68,-104.819,-107.337,-127.976 0|0:22:17,5,0,0,0:17:664:5,0,0,0:187,0,0,0:-10.568,0,-53.4709,-15.6855,-54.9761,-70.2842,-15.6855,-54.9761,-70.2842,-70.2842,-15.6855,-54.9761,-70.2842,-70.2842,-70.2842 0|0:46:24,1,18,3,0:24:921:1,18,3,0:39,681,119,0:-48.5781,-52.5965,-127.893,0,-72.3801,-70.1677,-46.0047,-118.397,-65.7892,-120.7,-55.8028,-128.194,-75.5862,-121.603,-131.4 0|1:20:15,0,2,0,3:15:584:0,2,0,3:0,67,0,120:-5.40801,-9.92346,-57.9311,-4.52314,-52.5105,-51.9084,-9.92346,-57.9311,-52.5105,-57.9311,0,-48.0439,-42.6241,-48.0439,-47.1408 0|0:24:12,4,6,0,1:12:472:4,6,0,1:136,238,0,41:-15.9957,-8.59902,-46.2177,0,-27.8301,-37.0405,-19.608,-47.4218,-38.8467,-58.4414,-16.2212,-44.037,-35.461,-55.0563,-54.7553 dDocent_Contig_3325 20 . G A 1057.49 . AB=0.295775;ABP=54.4528;AC=2;AF=0.166667;AN=12;AO=42;CIGAR=1X;DP=920;DPB=920;DPRA=0.365039;EPP=94.2121;EPPR=1907.39;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1680;QR=34704;RO=877;RPL=0;RPP=94.2121;RPPR=1907.39;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=877;SRP=1907.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:192:192,0:192:7616:0:0:0,-57.7978,-685.057 0/0:204:204,0:204:8133:0:0:0,-61.4101,-731.514 0/0:214:214,0:214:8399:0:0:0,-64.4204,-755.462 0/0:168:168,0:168:6627:0:0:0,-50.573,-596.145 0/1:60:35,25:35:1377:25:996:-71.8731,0,-106.128 0/1:82:64,17:64:2552:17:684:-37.098,0,-205.023 dDocent_Contig_3326 11 . A C 97397.3 . AB=0.86074;ABP=2202.62;AC=8;AF=0.666667;AN=12;AO=2890;CIGAR=1X;DP=3175;DPB=3175;DPRA=0;EPP=6278.57;EPPR=619.708;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.9962;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999654;PAIREDR=0.992958;PAO=0;PQA=0;PQR=0;PRO=0;QA=115482;QR=11349;RO=284;RPL=0;RPP=6278.57;RPPR=619.708;RPR=2890;RUN=1;SAF=2890;SAP=6278.57;SAR=0;SRF=284;SRP=619.708;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:434:71,362:71:2874:362:14494:-1172.59,0,-127.995 0/1:562:102,460:102:4053:460:18359:-1481.61,0,-195.574 0/1:532:58,474:58:2316:474:18990:-1547.33,0,-48.4398 0/1:418:39,379:39:1550:379:15145:-1236.05,0,-13.9131 1/1:676:2,674:2:82:674:26947:-2414.98,-195.717,0 1/1:553:12,541:12:474:541:21547:-1894.39,-123.462,0 dDocent_Contig_3327 17 . T C 1032 . AB=0.123077;ABP=965.541;AC=2;AF=0.166667;AN=12;AO=142;CIGAR=1X;DP=2057;DPB=2057;DPRA=1.13774;EPP=311.359;EPPR=4161.38;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999478;PAO=0;PQA=0;PQR=0;PRO=0;QA=5616;QR=76509;RO=1915;RPL=0;RPP=311.359;RPPR=4161.38;RPR=142;RUN=1;SAF=142;SAP=311.359;SAR=0;SRF=1915;SRP=4161.38;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:315:290,25:290:11577:25:1007:0,-3.89916,-950.187 0/0:334:313,21:313:12529:21:822:0,-26.2524,-1052.4 0/1:487:433,54:433:17335:54:2127:-45.0044,0,-1412.09 0/1:293:251,42:251:10018:42:1660:-61.4177,0,-812.771 0/0:342:342,0:342:13598:0:0:0,-102.952,-1222.81 0/0:286:286,0:286:11452:0:0:0,-86.0946,-1029.85 dDocent_Contig_3328 76 . C A 153.072 . AB=0.209302;ABP=34.5724;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=291;DPB=291;DPRA=0.984694;EPP=31.2394;EPPR=604.508;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.953069;PAO=0;PQA=0;PQR=0;PRO=0;QA=476;QR=10018;RO=277;RPL=13;RPP=31.2394;RPPR=604.508;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=277;SRP=604.508;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:33,1:33:1195:1:37:0,-6.88205,-104.18 0/0:67:65,2:65:2338:2:73:0,-13.2377,-203.732 0/1:43:34,9:34:1267:9:327:-16.8301,0,-101.369 0/0:48:47,1:47:1704:1:39:0,-10.5529,-149.744 0/0:35:35,0:35:1254:0:0:0,-10.536,-113.16 0/0:63:63,0:63:2260:0:0:0,-18.9649,-203.651 dDocent_Contig_3330 69 . G A 599.376 . AB=0.129032;ABP=521.782;AC=4;AF=0.333333;AN=12;AO=58;CIGAR=1X;DP=728;DPB=728;DPRA=0.656471;EPP=128.956;EPPR=1457.9;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.982759;PAIREDR=0.998507;PAO=0;PQA=0;PQR=0;PRO=0;QA=2263;QR=26214;RO=670;RPL=58;RPP=128.956;RPPR=1457.9;RPR=0;RUN=1;SAF=58;SAP=128.956;SAR=0;SRF=670;SRP=1457.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:77:63,14:63:2406:14:559:-27.4736,0,-193.515 0/1:86:77,9:77:3014:9:341:-5.14497,0,-245.476 0/1:157:142,15:142:5540:15:587:-5.90276,0,-451.189 0/1:114:96,18:96:3800:18:696:-28.638,0,-307.701 0/0:170:170,0:170:6691:0:0:0,-51.1751,-601.925 0/0:124:122,2:122:4763:2:80:0,-29.7361,-421.005 dDocent_Contig_3331 133 . C A 2297.29 . AB=0.387597;ABP=31.3236;AC=2;AF=0.166667;AN=12;AO=100;CIGAR=1X;DP=435;DPB=435;DPRA=2.91525;EPP=220.158;EPPR=730.454;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3445;QR=11288;RO=335;RPL=0;RPP=220.158;RPPR=730.454;RPR=100;RUN=1;SAF=0;SAP=220.158;SAR=100;SRF=0;SRP=730.454;SRR=335;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:47:47,0:47:1568:0:0:0,-14.1484,-141.405 0/0:60:60,0:60:2070:0:0:0,-18.0618,-186.57 0/0:45:45,0:45:1532:0:0:0,-13.5463,-138.171 0/0:25:25,0:25:841:0:0:0,-7.52575,-76.001 0/1:149:86,63:86:2877:63:2172:-150.892,0,-214.321 0/1:109:72,37:72:2400:37:1273:-82.0584,0,-183.449 dDocent_Contig_3332 40 . C A 83896 . AB=0.881057;ABP=1720.81;AC=9;AF=0.75;AN=12;AO=2503;CIGAR=1X;DP=2697;DPB=2697;DPRA=0;EPP=5438.21;EPPR=422.104;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998801;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=99212;QR=7731;RO=193;RPL=0;RPP=5438.21;RPPR=422.104;RPR=2503;RUN=1;SAF=2503;SAP=5438.21;SAR=0;SRF=193;SRP=422.104;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:403:71,332:71:2797:332:13213:-1066.88,0,-130.524 0/1:525:51,473:51:2075:473:18605:-1515.01,0,-28.9384 0/1:434:39,395:39:1566:395:15654:-1277.05,0,-10.5263 1/1:454:32,422:32:1293:422:16793:-1393.42,-20.037,0 1/1:511:0,511:0:0:511:20251:-1820.92,-153.826,0 1/1:370:0,370:0:0:370:14696:-1321.54,-111.381,0 dDocent_Contig_3333 98 . N G 1411.17 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=50;CIGAR=1X;DP=50;DPB=50;DPRA=0;EPP=111.584;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1539;QR=0;RO=0;RPL=50;RPP=111.584;RPPR=0;RPR=0;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:31:0,31:0:0:31:985:-88.9416,-9.33193,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:4:0,4:0:0:4:136:-12.5758,-1.20412,0 1/1:5:0,5:0:0:5:166:-15.2675,-1.50515,0 1/1:3:0,3:0:0:3:61:-5.6923,-0.90309,0 1/1:6:0,6:0:0:6:156:-14.2959,-1.80618,0 dDocent_Contig_3334 37 . T A 1048.06 . AB=0.275641;ABP=71.2168;AC=2;AF=0.166667;AN=12;AO=45;CIGAR=1X;DP=475;DPB=475;DPRA=1.16895;EPP=100.727;EPPR=934.572;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.955556;PAIREDR=0.979021;PAO=0;PQA=0;PQR=0;PRO=0;QA=1795;QR=15870;RO=429;RPL=0;RPP=100.727;RPPR=934.572;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=429;SRP=934.572;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:88:88,0:88:3227:0:0:0,-26.4906,-290.577 0/0:100:98,2:98:3585:2:82:0,-22.3233,-315.012 0/0:47:47,0:47:1765:0:0:0,-14.1484,-159.098 0/0:84:84,0:84:3120:0:0:0,-25.2865,-280.97 0/1:80:59,21:59:2160:21:847:-52.46,0,-170.542 0/1:76:53,22:53:2013:22:866:-55.5683,0,-158.729 dDocent_Contig_3335 24 . G C 22673 . AB=0.0508475;ABP=416.547;AC=0;AF=0;AN=12;AO=12;CIGAR=2X;DP=1083;DPB=1083;DPRA=0;EPP=29.068;EPPR=710.91;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.978528;PAO=0;PQA=0;PQR=0;PRO=0;QA=482;QR=11985;RO=326;RPL=0;RPP=29.068;RPPR=710.91;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=326;SRP=710.91;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:152:75,0,77:75:2741:0,77:0,2977:-222.31,-244.888,-468.829,0,-224.317,-201.137 0|0:262:89,0,173:89:3283:0,173:0,6711:-524.934,-551.726,-820.206,0,-268.855,-216.777 0|0:197:28,0,168:28:1020:0,168:0,6530:-528.407,-536.836,-620.143,0,-83.565,-32.992 0|0:236:43,0,193:43:1592:0,193:0,7507:-604.321,-617.265,-747.502,0,-130.61,-72.5109 0|0:137:67,4,66:67:2455:4,66:161,2573:-191.283,-198.182,-397.604,0,-187.333,-180.736 0|0:99:24,8,67:24:894:8,67:321,2610:-207.267,-188.041,-258.807,0,-46.7005,-52.9881 dDocent_Contig_3336 21 . T A 3863.71 . AB=0.145981;ABP=1994.05;AC=3;AF=0.25;AN=12;AO=303;CIGAR=1X;DP=3919;DPB=3919;DPRA=0.84581;EPP=660.966;EPPR=7855.05;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11905;QR=143857;RO=3616;RPL=0;RPP=660.966;RPPR=7855.05;RPR=303;RUN=1;SAF=303;SAP=660.966;SAR=0;SRF=3616;SRP=7855.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:645:550,95:550:21824:95:3678:-136.892,0,-1768.17 0/1:729:608,121:608:24172:121:4739:-206.987,0,-1953.93 0/1:455:404,51:404:16185:51:2050:-47.7132,0,-1318.37 0/0:634:598,36:598:23794:36:1438:0,-61.1785,-2009.74 0/0:812:812,0:812:32344:0:0:0,-244.436,-2908.01 0/0:644:644,0:644:25538:0:0:0,-193.863,-2296.17 dDocent_Contig_3337 12 . A G 235.352 . AB=0.184615;ABP=59.1679;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=162;DPB=162;DPRA=1.34021;EPP=29.068;EPPR=328.731;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=491;QR=5953;RO=150;RPL=0;RPP=29.068;RPPR=328.731;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=150;SRP=328.731;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1091:0:0:0,-8.12781,-98.4736 0/0:15:15,0:15:599:0:0:0,-4.51545,-54.248 0/0:7:7,0:7:269:0:0:0,-2.10721,-24.5704 0/0:48:48,0:48:1911:0:0:0,-14.4494,-172.195 0/1:37:34,3:34:1346:3:123:-0.326678,0,-110.26 0/1:28:19,9:19:737:9:368:-25.0565,0,-58.2151 dDocent_Contig_3338 33 . A C 13222.1 . AB=0.141414;ABP=1219.28;AC=1;AF=0.0833333;AN=12;AO=154;CIGAR=1X3M1X;DP=1716;DPB=1727.2;DPRA=0;EPP=311.867;EPPR=2243.97;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.941558;PAIREDR=0.998062;PAO=0;PQA=0;PQR=0;PRO=0;QA=6080;QR=40510;RO=1032;RPL=0;RPP=337.417;RPPR=2243.97;RPR=154;RUN=1;SAF=151;SAP=311.867;SAR=3;SRF=1032;SRP=2243.97;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:171:97,0,74:97:3794:0,74:0,2911:-210.639,-239.839,-551.759,0,-312.312,-290.036 0|0:334:230,3,96:230:9027:3,96:120,3747:-238.746,-298.098,-1039.58,0,-732.498,-713.485 0|0:196:126,0,70:126:4934:0,70:0,2697:-183.877,-221.807,-627.487,0,-406.068,-384.995 0|0:260:138,0,112:138:5440:0,112:0,4259:-307.745,-349.287,-796.852,0,-447.639,-413.923 0|0:424:321,45,57:321:12599:45,57:1785,2212:-85.0904,-34.7849,-1057.38,0,-889.204,-1018.98 0|1:331:120,106,100:120:4716:106,100:4175,3897:-307.33,0,-355.974,-23.1868,-67.6164,-380.965 dDocent_Contig_3339 11 . T A 281.191 . AB=0.173469;ABP=93.769;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=282;DPB=282;DPRA=1.06522;EPP=39.9253;EPPR=578.45;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8566;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.981132;PAO=0;PQA=0;PQR=0;PRO=0;QA=668;QR=10072;RO=265;RPL=0;RPP=39.9253;RPPR=578.45;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=265;SRP=578.45;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:48,0:48:1846:0:0:0,-14.4494,-166.375 0/0:83:83,0:83:3099:0:0:0,-24.9855,-279.048 0/0:24:24,0:24:913:0:0:0,-7.22472,-82.4794 0/0:29:29,0:29:1070:0:0:0,-8.72987,-96.5878 0/1:49:42,7:42:1632:7:280:-10.8213,0,-131.023 0/1:49:39,10:39:1512:10:388:-20.5196,0,-121.591 dDocent_Contig_3340 9 . A T 18225.8 . AB=0.0509915;ABP=621.166;AC=0;AF=0;AN=12;AO=18;CIGAR=2X;DP=650;DPB=650;DPRA=1.126;EPP=42.0968;EPPR=198.443;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.955556;PAO=0;PQA=0;PQR=0;PRO=0;QA=694;QR=3508;RO=90;RPL=0;RPP=42.0968;RPPR=198.443;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=90;SRP=198.443;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:119:24,5,90:24:929:5,90:197,3636:-292.539,-283.556,-358.359,0,-60.0969,-49.2131 0|0:133:19,5,109:19:739:5,109:181,4355:-352.987,-343.937,-403.16,0,-45.9852,-27.9388 0|0:101:20,8,73:20:784:8,73:316,2889:-231.712,-211.729,-273.793,0,-38.4662,-42.4956 0|0:88:27,0,61:27:1056:0,61:0,2445:-193.703,-201.831,-288.653,0,-87.2155,-68.8527 0|0:110:0,0,110:0:0:0,110:0,4444:-399.883,-399.883,-399.883,-33.1133,-33.1133,0 0|0:99:0,0,99:0:0:0,99:0,3989:-358.977,-358.977,-358.977,-29.802,-29.802,0 dDocent_Contig_3341 98 . N A 279.24 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=12;CIGAR=1X;DP=13;DPB=13;DPRA=0;EPP=29.068;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=285;QR=0;RO=0;RPL=12;RPP=29.068;RPPR=0;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,2:0:0:2:64:-5.91872,-0.60206,0 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 1/1:2:0,2:0:0:2:30:-2.84992,-0.60206,0 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:5:0,5:0:0:5:90:-8.27864,-1.50515,0 dDocent_Contig_3342 98 . N G 416.296 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=16;CIGAR=1X;DP=16;DPB=16;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=59.125;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0.875;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=440;QR=0;RO=0;RPL=14;RPP=22.5536;RPPR=0;RPR=2;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:100:-9.31789,-0.90309,0 1/1:1:0,1:0:0:1:6:-0.599999,-0.30103,0 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 1/1:3:0,3:0:0:3:91:-8.49171,-0.90309,0 1/1:8:0,8:0:0:8:214:-19.5235,-2.40824,0 ./.:.:.:.:.:.:.:. dDocent_Contig_3344 14 . C A 145.565 . AB=0.18;ABP=47.4821;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=252;DPB=252;DPRA=1.21053;EPP=31.2394;EPPR=521.992;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.615385;PAIREDR=0.405858;PAO=0;PQA=0;PQR=0;PRO=0;QA=506;QR=9495;RO=239;RPL=0;RPP=31.2394;RPPR=521.992;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=239;SRP=521.992;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:36,0:36:1435:0:0:0,-10.8371,-129.395 0/0:49:47,2:47:1846:2:82:0,-6.97079,-158.565 0/0:39:37,2:37:1481:2:82:0,-3.96049,-125.759 0/1:50:41,9:41:1632:9:342:-16.0793,0,-132.058 0/0:47:47,0:47:1870:0:0:0,-14.1484,-168.507 0/0:31:31,0:31:1231:0:0:0,-9.33193,-111.059 dDocent_Contig_3345 23 . G A 609.239 . AB=0.146758;ABP=320.571;AC=2;AF=0.166667;AN=12;AO=61;CIGAR=1X;DP=791;DPB=791;DPRA=0;EPP=135.47;EPPR=1586.01;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.934156;PAO=0;PQA=0;PQR=0;PRO=0;QA=2416;QR=28780;RO=729;RPL=0;RPP=135.47;RPPR=1586.01;RPR=61;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=729;SRP=1586.01;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:117:111,6:111:4337:6:245:0,-12.791,-367.87 0/0:162:154,7:154:6088:7:280:0,-23.3028,-522.145 0/0:88:87,1:87:3450:1:41:0,-22.3961,-306.458 0/0:131:127,4:127:5002:4:164:0,-24.285,-434.941 0/1:142:127,15:127:4997:15:580:-9.77634,0,-406.894 0/1:151:123,28:123:4906:28:1106:-54.3695,0,-395.992 dDocent_Contig_3346 8 . T C 1977.5 . AB=0.0378007;ABP=1082.94;AC=0;AF=0;AN=12;AO=46;CIGAR=3M2X;DP=1180;DPB=1205.2;DPRA=0;EPP=102.898;EPPR=2178.83;GTI=0;LEN=1;MEANALT=2.66667;MQM=30.1957;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1771;QR=38113;RO=1002;RPL=0;RPP=102.898;RPPR=2178.83;RPR=46;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=1002;SRP=2178.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:234:146,70,15:146:5552:70,15:2629,577:-171.476,0,-434.367,-180.121,-420.129,-630.97 0|0:348:301,39,7:301:11407:39,7:1465,270:-29.4959,0,-923.64,-104.309,-919.573,-1037.48 0|0:129:111,8,8:111:4230:8,8:299,312:0,-8.90081,-353.563,-14.969,-337.497,-359.57 0|0:176:155,8,12:155:5904:8,12:287,466:0,-23.2365,-505.194,-18.1858,-479.098,-498.887 0|0:173:172,0,1:172:6549:0,1:0,39:0,-51.7772,-589.015,-48.7975,-586.364,-586.063 0|0:120:117,0,3:117:4471:0,3:0,107:0,-35.2205,-402.158,-27.6776,-394.918,-394.015 dDocent_Contig_3347 93 . A G 420.88 . AB=0.0423729;ABP=217.655;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1M1X;DP=197;DPB=197;DPRA=0;EPP=13.8677;EPPR=315.761;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0;PAIREDR=0.459459;PAO=0;PQA=0;PQR=0;PRO=0;QA=137;QR=5098;RO=148;RPL=5;RPP=13.8677;RPPR=45.7942;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=100;SRP=42.6837;SRR=48;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:18:11,4,1,2,0:11:369:4,1,2,0:132,29,80,0:-7.34243,0,-28.659,-8.35412,-27.5584,-37.9264,-4.04345,-23.2653,-31.6316,-33.3355,-10.6538,-29.8631,-38.2275,-33.9375,-40.5333 0|0:35:26,2,1,2,4:26:897:2,1,2,4:61,33,66,134:-3.02829,-5.97648,-78.2569,-8.18646,-76.1912,-80.7727,-5.51772,-73.5234,-75.738,-77.8038,0,-68.0116,-70.2261,-67.5583,-71.6898 0|0:24:14,0,2,1,7:14:481:0,2,1,7:0,66,34,272:-18.1729,-22.3873,-61.431,-17.0615,-56.097,-55.4949,-19.6329,-58.6737,-53.3399,-58.3727,0,-39.0686,-33.7338,-36.3107,-36.9614 0|0:41:35,0,1,5,0:35:1201:0,1,5,0:0,9,157,0:-2.26503,-12.8011,-110.368,-12.3294,-109.865,-109.564,0,-97.7559,-97.254,-96.2507,-12.8011,-110.368,-109.865,-97.7559,-110.368 0|0:52:40,1,0,11,0:40:1391:1,0,11,0:8,0,384,0:-19.434,-31.0786,-143.873,-31.4752,-144.174,-144.588,0,-112.945,-113.358,-110.046,-31.4752,-144.174,-144.588,-113.358,-144.588 0|0:27:22,0,0,3,2:22:759:0,0,3,2:0,0,117,70:-3.01708,-9.63973,-71.2767,-9.63973,-71.2767,-71.2767,0,-61.6559,-61.6559,-60.7528,-3.96015,-65.5813,-65.5813,-55.96,-64.9792 dDocent_Contig_3348 24 . C T 111.819 . AB=0.092511;ABP=657.8;AC=1;AF=0.0833333;AN=12;AO=100;CIGAR=1X;DP=2272;DPB=2272;DPRA=0;EPP=220.158;EPPR=4719.45;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996317;PAO=0;PQA=0;PQR=0;PRO=0;QA=3934;QR=85678;RO=2172;RPL=0;RPP=220.158;RPPR=4719.45;RPR=100;RUN=1;SAF=100;SAP=220.158;SAR=0;SRF=2172;SRP=4719.45;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:383:358,25:358:14070:25:978:0,-26.9665,-1177.06 0/0:350:345,5:345:13611:5:183:0,-88.5365,-1207.28 0/0:240:230,10:230:9108:10:396:0,-36.2498,-783.235 0/0:356:341,15:341:13550:15:604:0,-52.4676,-1163.87 0/1:454:412,42:412:16206:42:1657:-12.7048,0,-1320.75 0/0:489:486,3:486:19133:3:116:0,-136.388,-1709.74 dDocent_Contig_3349 28 . G C 276.999 . AB=0.121849;ABP=298.623;AC=3;AF=0.25;AN=12;AO=50;CIGAR=1X;DP=521;DPB=521;DPRA=0;EPP=111.584;EPPR=1025.77;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9682;NS=6;NUMALT=1;ODDS=0;PAIRED=0.64;PAIREDR=0.484076;PAO=0;PQA=0;PQR=0;PRO=0;QA=1982;QR=18636;RO=471;RPL=0;RPP=111.584;RPPR=1025.77;RPR=50;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=471;SRP=1025.77;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:47:41,6:41:1605:6:235:-7.37062,0,-130.529 0/1:107:94,13:94:3738:13:527:-15.566,0,-304.212 0/0:68:64,4:64:2502:4:163:0,-5.41161,-210.269 0/0:76:70,6:70:2799:6:241:0,-0.812483,-229.933 0/1:84:74,10:74:2938:10:388:-9.98492,0,-239.228 0/0:139:128,11:128:5054:11:428:0,-2.97466,-415.876 dDocent_Contig_3350 95 . C T 27019.2 . AB=0.285441;ABP=1887.14;AC=6;AF=0.5;AN=12;AO=1345;CIGAR=1X;DP=4712;DPB=4712;DPRA=0;EPP=2923.64;EPPR=7310.01;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=45899;QR=115394;RO=3365;RPL=1345;RPP=2923.64;RPPR=7310.01;RPR=0;RUN=1;SAF=1345;SAP=2923.64;SAR=0;SRF=3365;SRP=7310.01;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:854:740,113:740:25392:113:3845:-89.3047,0,-2027.82 0/1:961:743,218:743:25473:218:7482:-384.182,0,-2002.79 0/1:749:592,157:592:20340:157:5329:-254.302,0,-1604.8 0/1:924:793,130:793:27141:130:4389:-117.073,0,-2164.02 0/1:726:281,445:281:9601:445:15198:-1149.12,0,-645.57 0/1:498:216,282:216:7447:282:9656:-719.159,0,-520.418 dDocent_Contig_3352 46 . A G 31.6788 . AB=0.109091;ABP=76.0113;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=274;DPB=274;DPRA=1.17073;EPP=29.068;EPPR=571.936;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.538168;PAO=0;PQA=0;PQR=0;PRO=0;QA=471;QR=10290;RO=262;RPL=0;RPP=29.068;RPPR=571.936;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=262;SRP=571.936;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:52:49,3:49:1925:3:119:0,-4.55816,-162.368 0/0:48:46,2:46:1799:2:80:0,-6.85786,-154.54 0/0:37:36,1:36:1412:1:40:0,-7.14243,-123.343 0/1:55:49,6:49:1932:6:232:-4.69046,0,-157.532 0/0:33:33,0:33:1274:0:0:0,-9.93399,-114.924 0/0:49:49,0:49:1948:0:0:0,-14.7505,-175.525 dDocent_Contig_3353 93 . A C 39334.3 . AB=0.847059;ABP=447.651;AC=10;AF=0.833333;AN=12;AO=1322;CIGAR=1X;DP=1448;DPB=1448;DPRA=0;EPP=2873.7;EPPR=272.273;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997731;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=47178;QR=4309;RO=124;RPL=1322;RPP=2873.7;RPPR=272.273;RPR=0;RUN=1;SAF=1322;SAP=2873.7;SAR=0;SRF=124;SRP=272.273;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:187:32,155:32:1112:155:5402:-430.032,0,-44.0951 1/1:487:45,442:45:1532:442:15648:-1269.88,-8.43824,0 1/1:180:13,167:13:468:167:6067:-503.637,-11.7268,0 0/1:238:33,205:33:1190:205:7382:-592.74,0,-35.7563 1/1:174:0,174:0:0:174:6141:-552.799,-52.3792,0 1/1:182:1,179:1:7:179:6538:-587.567,-53.652,0 dDocent_Contig_3354 100 . A G 2840.06 . AB=0.136691;ABP=1437.26;AC=6;AF=0.5;AN=12;AO=171;CIGAR=2X;DP=1251;DPB=1276.5;DPRA=0;EPP=241.352;EPPR=1169.7;GTI=0;LEN=1;MEANALT=5.5;MQM=56.3567;MQMR=57.0712;NS=6;NUMALT=3;ODDS=0;PAIRED=0.0643275;PAIREDR=0.565836;PAO=0;PQA=0;PQR=557.667;PRO=17;QA=6715;QR=32586;RO=843;RPL=171;RPP=374.332;RPPR=1824.89;RPR=0;RUN=1;SAF=154;SAP=241.352;SAR=17;SRF=84;SRP=1176.65;SRR=759;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:235:184,24,7,19:184:7146:24,7,19:934,272,725:-21.2294,0,-575.324,-54.2696,-560.199,-634.716,-17.4776,-523.399,-577.674,-594.305 0|1:259:151,38,27,34:151:5875:38,27,34:1468,1052,1260:-74.6861,0,-463.839,-33.6839,-388.822,-500.835,-17.1753,-372.309,-405.993,-482.214 0|1:159:99,33,2,22:99:3770:33,2,22:1296,80,850:-76.2858,0,-295.058,-99.4972,-298.402,-403.889,-36.3902,-235.291,-334.79,-334.758 0|1:184:130,24,14,14:130:5043:24,14,14:934,541,530:-35.9871,0,-404.207,-37.3431,-373.642,-444.546,-33.6397,-369.946,-407.276,-440.85 0|1:218:140,35,6,31:140:5353:35,6,31:1403,232,1179:-73.1394,0,-418.25,-96.2295,-409.731,-523.207,-18.6143,-332.108,-428.335,-438.058 0|1:196:139,17,10,13:139:5399:17,10,13:680,398,515:-13.9005,0,-434.666,-22.9643,-407.011,-459.73,-13.7138,-397.763,-420.719,-449.578 dDocent_Contig_3355 32 . C A 102266 . AB=0.668574;ABP=1210.99;AC=6;AF=0.5;AN=12;AO=3272;CIGAR=1X;DP=4894;DPB=4894;DPRA=0;EPP=7108.07;EPPR=3518.62;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996912;PAO=0;PQA=0;PQR=0;PRO=0;QA=130242;QR=64521;RO=1619;RPL=0;RPP=7108.07;RPPR=3518.62;RPR=3272;RUN=1;SAF=3272;SAP=7108.07;SAR=0;SRF=1619;SRP=3518.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:757:298,459:298:11869:459:18255:-1413.6,0,-839.486 0/1:802:308,494:308:12210:494:19605:-1521.41,0,-856.603 0/1:580:143,435:143:5736:435:17324:-1383.49,0,-341.759 0/1:808:186,621:186:7387:621:24693:-1976.94,0,-421.142 0/1:1022:366,656:366:14610:656:26130:-2041.77,0,-1006.1 0/1:925:318,607:318:12709:607:24235:-1900.59,0,-864.414 dDocent_Contig_3356 53 . T C 9974.92 . AB=0.451407;ABP=19.0492;AC=6;AF=0.5;AN=12;AO=353;CIGAR=1X;DP=782;DPB=782;DPRA=0;EPP=769.54;EPPR=932.4;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997167;PAIREDR=0.995327;PAO=0;PQA=0;PQR=0;PRO=0;QA=13810;QR=15858;RO=428;RPL=353;RPP=769.54;RPPR=932.4;RPR=0;RUN=1;SAF=353;SAP=769.54;SAR=0;SRF=428;SRP=932.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:110:72,38:72:2664:38:1511:-103.125,0,-206.835 0/1:210:128,82:128:4745:82:3252:-229.531,0,-363.889 0/1:93:66,27:66:2478:27:1078:-69.3136,0,-195.226 0/1:153:72,81:72:2645:81:3145:-237.081,0,-192.198 0/1:92:44,47:44:1627:47:1827:-137.152,0,-119.193 0/1:124:46,78:46:1699:78:2997:-232.51,0,-115.841 dDocent_Contig_3357 1 . N G 59449.5 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=1655;CIGAR=1X;DP=1655;DPB=1655;DPRA=0;EPP=3596.8;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998187;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=66096;QR=0;RO=0;RPL=0;RPP=3596.8;RPPR=0;RPR=1655;RUN=1;SAF=1655;SAP=3596.8;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:257:0,257:0:0:257:10328:-928.819,-77.3647,0 1/1:355:0,355:0:0:355:14079:-1266.06,-106.866,0 1/1:149:0,149:0:0:149:5937:-534.099,-44.8535,0 1/1:248:0,248:0:0:248:9953:-895.111,-74.6554,0 1/1:374:0,374:0:0:374:14922:-1341.84,-112.585,0 1/1:272:0,272:0:0:272:10877:-978.174,-81.8802,0 dDocent_Contig_3358 122 . T C 36.7241 . AB=0.121951;ABP=53.9075;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=170;DPB=170;DPRA=0.896774;EPP=26.8965;EPPR=348.274;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.855346;PAO=0;PQA=0;PQR=0;PRO=0;QA=412;QR=6361;RO=159;RPL=0;RPP=26.8965;RPPR=348.274;RPR=11;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=348.274;SRR=159;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:37,2:37:1475:2:75:0,-4.62007,-125.881 0/0:31:31,0:31:1249:0:0:0,-9.33193,-112.68 0/0:36:33,3:33:1317:3:103:0,-1.23029,-109.187 0/0:23:22,1:22:885:1:39:0,-3.02713,-76.0627 0/1:19:16,3:16:627:3:117:-5.19081,0,-51.0418 0/1:22:20,2:20:808:2:78:-0.780813,0,-66.4143 dDocent_Contig_3360 173 . G T 99.6147 . AB=0.145833;ABP=55.3066;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=281;DPB=281;DPRA=1.03004;EPP=18.2106;EPPR=597.994;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.79927;PAO=0;PQA=0;PQR=0;PRO=0;QA=284;QR=10935;RO=274;RPL=7;RPP=18.2106;RPPR=597.994;RPR=0;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=597.994;SRR=274;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:57:57,0:57:2279:0:0:0,-17.1587,-205.27 0/0:66:66,0:66:2645:0:0:0,-19.868,-238.169 0/0:41:41,0:41:1649:0:0:0,-12.3422,-148.634 0/1:48:41,7:41:1610:7:284:-11.4843,0,-130.67 0/0:45:45,0:45:1782:0:0:0,-13.5463,-160.582 0/0:24:24,0:24:970:0:0:0,-7.22472,-87.5987 dDocent_Contig_3361 10 . C T 578.71 . AB=0.156951;ABP=230.956;AC=1;AF=0.0833333;AN=12;AO=35;CIGAR=1X;DP=2516;DPB=2516;DPRA=0.486263;EPP=79.0118;EPPR=5390.43;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1403;QR=99552;RO=2481;RPL=0;RPP=79.0118;RPPR=5390.43;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=2481;SRP=5390.43;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:575:575,0:575:23025:0:0:0,-173.092,-2070.25 0/0:468:468,0:468:18774:0:0:0,-140.882,-1688.08 0/0:418:418,0:418:16757:0:0:0,-125.831,-1506.76 0/0:654:654,0:654:26266:0:0:0,-196.874,-2361.55 0/0:178:178,0:178:7175:0:0:0,-53.5833,-645.382 0/1:223:188,35:188:7555:35:1403:-59.3939,0,-612.416 dDocent_Contig_3362 79 . G A 7465.86 . AB=0.69;ABP=128.435;AC=6;AF=0.5;AN=12;AO=276;CIGAR=1X;DP=400;DPB=400;DPRA=0;EPP=602.337;EPPR=272.273;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.971014;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9718;QR=4198;RO=124;RPL=276;RPP=602.337;RPPR=272.273;RPR=0;RUN=1;SAF=276;SAP=602.337;SAR=0;SRF=124;SRP=272.273;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:39:4,35:4:128:35:1217:-98.0906,0,-0.0966483 0/1:54:7,47:7:226:47:1630:-130.73,0,-4.40187 0/1:32:5,27:5:180:27:954:-76.5358,0,-6.91894 0/1:73:34,39:34:1163:39:1381:-102.607,0,-82.9936 0/1:106:45,61:45:1501:61:2170:-163.65,0,-103.465 0/1:96:29,67:29:1000:67:2366:-184.289,0,-61.4105 dDocent_Contig_3363 77 . G T 86095.5 . AB=0.0454228;ABP=2571.45;AC=1;AF=0.0833333;AN=12;AO=65;CIGAR=1X3M1X;DP=3369;DPB=3369;DPRA=0.669944;EPP=144.156;EPPR=765.197;GTI=0;LEN=1;MEANALT=4.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2292;QR=12472;RO=351;RPL=65;RPP=144.156;RPPR=765.197;RPR=0;RUN=1;SAF=65;SAP=144.156;SAR=0;SRF=351;SRP=765.197;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:559:37,51,468:37:1309:51,468:1807,16451:-1368.5,-1232.43,-1323.7,-40.5858,0,-6.3236 0|0:573:74,0,492:74:2627:0,492:0,17279:-1384.13,-1406.4,-1620.45,0,-214.129,-66.0227 0|0:343:54,12,275:54:1906:12,275:411,9955:-796.443,-779.337,-930.925,0,-121.855,-72.4329 0|0:529:93,2,432:93:3271:2,432:74,15656:-1250.29,-1272.23,-1537.89,0,-260.249,-136.258 0|0:712:28,0,678:28:1000:0,678:0,24440:-2108.48,-2116.91,-2198.43,-122.506,-204.098,0 0|0:653:65,0,584:65:2359:0,584:0,21191:-1710.93,-1730.49,-1923.13,0,-192.768,-16.9667 dDocent_Contig_3364 11 . T G 290.281 . AB=0.141892;ABP=167.866;AC=1;AF=0.0833333;AN=12;AO=33;CIGAR=1X;DP=1018;DPB=1018;DPRA=1.1084;EPP=74.6689;EPPR=2141.91;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.998985;PAO=0;PQA=0;PQR=0;PRO=0;QA=1313;QR=39212;RO=985;RPL=0;RPP=74.6689;RPPR=2141.91;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=985;SRP=2141.91;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:207:207,0:207:8171:0:0:0,-62.3132,-734.958 0/0:226:226,0:226:9008:0:0:0,-68.0328,-810.184 0/0:130:130,0:130:5195:0:0:0,-39.1339,-467.409 0/0:92:92,0:92:3674:0:0:0,-27.6948,-330.678 0/1:148:127,21:127:5022:21:831:-30.551,0,-407.324 0/0:215:203,12:203:8142:12:482:0,-20.9906,-688.588 dDocent_Contig_3365 17 . T C 5371.3 . AB=0.269767;ABP=101.999;AC=7;AF=0.583333;AN=12;AO=58;CIGAR=1X3M;DP=399;DPB=399;DPRA=0;EPP=128.956;EPPR=350.446;GTI=0;LEN=1;MEANALT=2.75;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=5.55112e-17;PAIRED=0.965517;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2264;QR=6178;RO=160;RPL=0;RPP=128.956;RPPR=350.446;RPR=58;RUN=1;SAF=58;SAP=128.956;SAR=0;SRF=160;SRP=350.446;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:51:9,16,0,26:9:358:16,0,26:621,0,996:-100.536,-52.2238,-76.887,-103.245,-81.7035,-132.723,-21.5341,0,-51.0134,-43.1867 0|1:63:20,21,5,14:20:735:21,5,14:831,155,555:-62.3853,0,-53.7546,-57.3281,-48.9969,-115.889,-22.7184,-14.3816,-71.711,-78.5773 0|1:31:11,13,0,7:11:416:13,0,7:519,0,286:-39.4291,0,-30.1662,-42.7404,-34.0796,-76.8299,-19.1376,-10.4683,-53.2261,-51.1189 0|1:70:26,31,2,11:26:1016:31,2,11:1223,60,427:-92.8139,0,-74.2043,-96.3099,-79.206,-179.23,-65.5568,-48.451,-144.749,-145.77 0|1:124:65,59,0,0:65:2527:59,0,0:2284,0,0:-168.424,0,-190.268,-187.991,-208.029,-395.632,-187.991,-208.029,-395.632,-395.632 0|1:60:29,29,0,0:29:1126:29,0,0:1137,0,0:-84.7634,0,-83.7771,-93.4932,-92.507,-186.005,-93.4932,-92.507,-186.005,-186.005 dDocent_Contig_3366 12 . T G 8069.78 . AB=0.314083;ABP=299.336;AC=6;AF=0.5;AN=12;AO=310;CIGAR=1X;DP=987;DPB=987;DPRA=0;EPP=676.167;EPPR=1473.1;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.980798;PAO=0;PQA=0;PQR=0;PRO=0;QA=12380;QR=27098;RO=677;RPL=0;RPP=676.167;RPPR=1473.1;RPR=310;RUN=1;SAF=310;SAP=676.167;SAR=0;SRF=677;SRP=1473.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:177:125,52:125:5006:52:2045:-130.962,0,-397.127 0/1:191:153,38:153:6126:38:1527:-80.1761,0,-493.599 0/1:91:64,27:64:2585:27:1093:-71.2616,0,-205.377 0/1:208:118,90:118:4698:90:3614:-262.66,0,-360.119 0/1:123:98,25:98:3930:25:989:-52.2823,0,-316.654 0/1:197:119,78:119:4753:78:3112:-220.858,0,-368.372 dDocent_Contig_3367 21 . A T 11882.5 . AB=0.366894;ABP=183.368;AC=2;AF=0.166667;AN=12;AO=432;CIGAR=1X;DP=2241;DPB=2241;DPRA=1.59049;EPP=941.086;EPPR=3931.2;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998894;PAO=0;PQA=0;PQR=0;PRO=0;QA=17251;QR=72206;RO=1809;RPL=0;RPP=941.086;RPPR=3931.2;RPR=432;RUN=1;SAF=432;SAP=941.086;SAR=0;SRF=1809;SRP=3931.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:273:272,1:272:10917:1:40:0,-78.1855,-977.764 0/0:260:259,1:259:10312:1:41:0,-74.1732,-923.324 0/0:192:192,0:192:7643:0:0:0,-57.7978,-687.456 0/0:344:344,0:344:13691:0:0:0,-103.554,-1231.17 0/1:600:343,257:343:13648:257:10280:-743.883,0,-1046.67 0/1:572:399,173:399:15995:173:6890:-447.594,0,-1266.07 dDocent_Contig_3368 46 . A C 5412.35 . AB=0.265089;ABP=408.032;AC=4;AF=0.333333;AN=12;AO=258;CIGAR=1X;DP=1340;DPB=1340;DPRA=0;EPP=563.25;EPPR=2350.37;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10284;QR=42674;RO=1081;RPL=0;RPP=563.25;RPPR=2350.37;RPR=258;RUN=1;SAF=258;SAP=563.25;SAR=0;SRF=1081;SRP=2350.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:150:139,11:139:5479:11:445:0,-4.74842,-452.555 0/1:109:86,23:86:3408:23:933:-51.4594,0,-273.964 0/1:113:80,33:80:3168:33:1328:-85.7667,0,-251.189 0/1:341:202,138:202:8002:138:5458:-388.294,0,-616.999 0/1:282:252,30:252:9967:30:1195:-22.9372,0,-811.547 0/0:345:322,23:322:12650:23:925:0,-20.3028,-1054.12 dDocent_Contig_3369 9 . G A 113654 . AB=0.752002;ABP=2758.78;AC=6;AF=0.5;AN=12;AO=3757;CIGAR=1X2M;DP=4996;DPB=4996;DPRA=0;EPP=8135.2;EPPR=1792.3;GTI=0;LEN=1;MEANALT=3.66667;MQM=59.091;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.980037;PAIREDR=0.985437;PAO=0;PQA=0;PQR=0;PRO=0;QA=142088;QR=32223;RO=824;RPL=0;RPP=8161.23;RPPR=1792.3;RPR=3757;RUN=1;SAF=3754;SAP=8135.2;SAR=3;SRF=824;SRP=1792.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:664:89,81,489:89:3504:81,489:3145,18552:-1492.64,-1261.03,-1524.91,0,-29.8643,-141.06 0|1:842:150,90,600:150:5834:90,600:3546,22670:-1808.1,-1563.27,-2015.6,0,-189.436,-298.799 0|1:525:122,53,347:122:4775:53,347:2088,13265:-1051.07,-916.033,-1292.69,0,-220.848,-288.153 0|1:648:122,62,464:122:4774:62,464:2360,17419:-1385.2,-1231.68,-1605.54,0,-202.293,-252.858 0|1:1235:180,46,1004:180:7031:46,1004:1777,38082:-3065.05,-2973.3,-3537.45,0,-432.065,-275.767 0|1:1082:161,66,853:161:6305:66,853:2574,32100:-2574.61,-2411.5,-2910.07,0,-306.867,-261.66 dDocent_Contig_3370 87 . C G 290.891 . AB=0.195876;ABP=80.9371;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=810;DPB=810;DPRA=0.608696;EPP=46.4397;EPPR=1718.47;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.993671;PAO=0;PQA=0;PQR=0;PRO=0;QA=686;QR=27848;RO=790;RPL=20;RPP=46.4397;RPPR=1718.47;RPR=0;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=790;SRP=1718.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:153:153,0:153:5352:0:0:0,-46.0576,-481.819 0/0:192:192,0:192:6806:0:0:0,-57.7978,-612.622 0/0:96:96,0:96:3382:0:0:0,-28.8989,-304.595 0/0:180:180,0:180:6357:0:0:0,-54.1854,-572.228 0/0:92:91,1:91:3209:1:25:0,-25.1949,-286.538 0/1:97:78,19:78:2742:19:661:-30.612,0,-217.825 dDocent_Contig_3371 16 . G A 353.576 . AB=0.246914;ABP=48.0751;AC=3;AF=0.25;AN=12;AO=25;CIGAR=1X;DP=311;DPB=311;DPRA=0.471875;EPP=7.26639;EPPR=624.051;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=896;QR=11397;RO=286;RPL=0;RPP=57.2971;RPPR=624.051;RPR=25;RUN=1;SAF=9;SAP=7.26639;SAR=16;SRF=286;SRP=624.051;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:27:23,4:23:898:4:150:-5.73688,0,-72.992 0/1:29:17,12:17:668:12:401:-27.6761,0,-51.7134 0/0:70:65,5:65:2588:5:186:0,-3.97773,-215.948 0/1:25:21,4:21:845:4:159:-7.16637,0,-68.8368 0/0:87:87,0:87:3501:0:0:0,-26.1896,-315.123 0/0:73:73,0:73:2897:0:0:0,-21.9752,-260.822 dDocent_Contig_3372 69 . T A 339.895 . AB=0.215909;ABP=64.6999;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=313;DPB=313;DPRA=0.588832;EPP=46.4397;EPPR=639.252;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.9;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=733;QR=10630;RO=293;RPL=20;RPP=46.4397;RPPR=639.252;RPR=0;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=293;SRP=639.252;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:27,1:27:992:1:37:0,-4.73101,-85.8991 0/1:59:43,16:43:1546:16:588:-35.4966,0,-121.665 0/0:80:80,0:80:2912:0:0:0,-24.0824,-262.299 0/1:29:26,3:26:953:3:108:-1.34521,0,-77.3584 0/0:69:69,0:69:2505:0:0:0,-20.7711,-225.69 0/0:48:48,0:48:1722:0:0:0,-14.4494,-155.256 dDocent_Contig_3373 1 . N G 74.0386 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=78;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:78:-7.40278,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_3374 38 . T C 16198.6 . AB=0.68617;ABP=229.398;AC=6;AF=0.5;AN=12;AO=516;CIGAR=1X;DP=752;DPB=752;DPRA=0;EPP=1123.49;EPPR=515.478;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.965116;PAIREDR=0.983051;PAO=0;PQA=0;PQR=0;PRO=0;QA=20636;QR=8972;RO=236;RPL=0;RPP=1123.49;RPPR=515.478;RPR=516;RUN=1;SAF=516;SAP=1123.49;SAR=0;SRF=236;SRP=515.478;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:104:36,68:36:1348:68:2677:-209.74,0,-90.2867 0/1:141:26,115:26:1001:115:4624:-373.622,0,-47.9528 0/1:102:19,83:19:735:83:3324:-268.51,0,-35.775 0/1:134:25,109:25:955:109:4395:-355.142,0,-45.9212 0/1:119:53,66:53:1995:66:2623:-200.366,0,-143.944 0/1:152:77,75:77:2938:75:2993:-223.7,0,-218.813 dDocent_Contig_3375 157 . T C 32.3566 . AB=0.121951;ABP=53.9075;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=171;DPB=171;DPRA=1.57692;EPP=13.8677;EPPR=363.475;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.722892;PAO=0;PQA=0;PQR=0;PRO=0;QA=186;QR=6568;RO=166;RPL=5;RPP=13.8677;RPPR=363.475;RPR=0;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=363.475;SRR=166;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:554:0:0:0,-4.21442,-50.2019 0/0:26:26,0:26:1025:0:0:0,-7.82678,-92.5458 0/0:32:32,0:32:1249:0:0:0,-9.63296,-112.683 0/0:32:32,0:32:1275:0:0:0,-9.63296,-115.02 0/0:26:26,0:26:1033:0:0:0,-7.82678,-93.2636 0/1:41:36,5:36:1432:5:186:-4.75829,0,-116.792 dDocent_Contig_3376 25 . T C 63911 . AB=0.44061;ABP=155.703;AC=6;AF=0.5;AN=12;AO=2196;CIGAR=1X;DP=4984;DPB=4984;DPRA=0;EPP=4771.56;EPPR=6048.39;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999545;PAIREDR=0.999641;PAO=0;PQA=0;PQR=0;PRO=0;QA=87883;QR=111031;RO=2784;RPL=0;RPP=4771.56;RPPR=6048.39;RPR=2196;RUN=1;SAF=2196;SAP=4771.56;SAR=0;SRF=2784;SRP=6048.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:919:627,292:627:25006:292:11692:-774.804,0,-1971.68 0/1:894:626,266:626:25005:266:10686:-692.071,0,-1979.32 0/1:521:378,143:378:15089:143:5705:-356.414,0,-1199.99 0/1:1008:728,280:728:28994:280:11239:-707.283,0,-2303.41 0/1:836:211,624:211:8385:624:24888:-1986,0,-502.474 0/1:806:214,591:214:8552:591:23673:-1885.75,0,-526.445 dDocent_Contig_3380 48 . C T 284.154 . AB=0.172043;ABP=89.8925;AC=1;AF=0.0833333;AN=12;AO=41;CIGAR=1X;DP=1048;DPB=1048;DPRA=0.779439;EPP=92.0407;EPPR=2170.17;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.986083;PAO=0;PQA=0;PQR=0;PRO=0;QA=1642;QR=40085;RO=1006;RPL=0;RPP=92.0407;RPPR=2170.17;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=1006;SRP=2187.51;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:180:166,14:166:6634:14:562:0,-3.26742,-545.843 0/0:221:217,3:217:8661:3:122:0,-55.0231,-767.701 0/1:93:77,16:77:3064:16:640:-29.9382,0,-247.834 0/0:181:175,6:175:6940:6:237:0,-32.7853,-602.565 0/0:159:157,2:157:6221:2:81:0,-40.178,-551.965 0/0:214:214,0:214:8565:0:0:0,-64.4204,-770.347 dDocent_Contig_3381 8 . T C 510.095 . AB=0.112228;ABP=782.736;AC=2;AF=0.166667;AN=12;AO=67;CIGAR=1X;DP=1536;DPB=1536;DPRA=1.27157;EPP=148.499;EPPR=3192.9;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998639;PAO=0;PQA=0;PQR=0;PRO=0;QA=2593;QR=56454;RO=1469;RPL=0;RPP=148.499;RPPR=3192.9;RPR=67;RUN=1;SAF=67;SAP=148.499;SAR=0;SRF=1469;SRP=3192.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:266:266,0:266:10239:0:0:0,-80.074,-921.135 0/0:253:253,0:253:9754:0:0:0,-76.1606,-877.515 0/0:136:136,0:136:5230:0:0:0,-40.9401,-470.69 0/0:284:284,0:284:10872:0:0:0,-85.4925,-978.067 0/1:254:230,24:230:8848:24:933:-7.82436,0,-719.577 0/1:343:300,43:300:11511:43:1660:-46.407,0,-932.278 dDocent_Contig_3382 30 . T C 3716.88 . AB=0.138249;ABP=2469.58;AC=4;AF=0.333333;AN=12;AO=355;CIGAR=1X;DP=3499;DPB=3499;DPRA=0;EPP=773.883;EPPR=6793.2;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997183;PAIREDR=0.99968;PAO=0;PQA=0;PQR=0;PRO=0;QA=13508;QR=101985;RO=3127;RPL=0;RPP=773.883;RPPR=6793.2;RPR=355;RUN=1;SAF=355;SAP=773.883;SAR=0;SRF=3127;SRP=6793.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:526:431,92:431:13862:92:3547:-161.763,0,-1089.93 0/1:571:504,64:504:16506:64:2353:-40.8386,0,-1314.25 0/1:551:464,84:464:15050:84:3225:-125.265,0,-1189.26 0/1:522:461,60:461:15124:60:2309:-51.0433,0,-1204.05 0/0:716:703,11:703:23051:11:435:0,-175.725,-2034.65 0/0:613:564,44:564:18392:44:1639:0,-35.4054,-1507.26 dDocent_Contig_3383 8 . G T 2176.19 . AB=0.222004;ABP=1028.03;AC=2;AF=0.166667;AN=12;AO=672;CIGAR=1X;DP=4754;DPB=4754;DPRA=0;EPP=1462.24;EPPR=8864.79;GTI=0;LEN=1;MEANALT=1.16667;MQM=22.9509;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.946429;PAIREDR=0.999755;PAO=0;PQA=0;PQR=0;PRO=0;QA=25798;QR=156297;RO=4081;RPL=0;RPP=1462.24;RPPR=8864.79;RPR=672;RUN=1;SAF=672;SAP=1462.24;SAR=0;SRF=4081;SRP=8864.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:763:571,192:571:21774:192:7377:-161.931,0,-1728.78 0/0:928:800,127:800:30556:127:4883:0,-16.3399,-2485.16 0/0:534:503,31:503:19280:31:1197:0,-105.369,-1678.79 0/1:764:617,147:617:23662:147:5634:-58.9097,0,-1898.22 0/0:992:909,83:909:34886:83:3174:0,-119.716,-2958.65 0/0:773:681,92:681:26139:92:3533:0,-35.4704,-2153.75 dDocent_Contig_3384 89 . T C 228.133 . AB=0.152672;ABP=140.277;AC=2;AF=0.166667;AN=12;AO=27;CIGAR=1X;DP=417;DPB=417;DPRA=0.974648;EPP=5.02092;EPPR=83.1877;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.518519;PAIREDR=0.4;PAO=0;PQA=0;PQR=0;PRO=0;QA=972;QR=14070;RO=390;RPL=27;RPP=61.6401;RPPR=849.885;RPR=0;RUN=1;SAF=16;SAP=5.02092;SAR=11;SRF=255;SRP=83.1877;SRR=135;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:55:51,4:51:1868:4:141:0,-3.5227,-155.318 0/0:107:105,2:105:3806:2:76:0,-24.9967,-335.467 0/0:53:52,1:52:1868:1:35:0,-12.456,-164.877 0/0:71:71,0:71:2565:0:0:0,-21.3731,-231.07 0/1:72:60,12:60:2122:12:438:-18.0778,0,-169.535 0/1:59:51,8:51:1841:8:282:-7.95733,0,-148.185 dDocent_Contig_3385 143 . T A 1494.43 . AB=0.136929;ABP=1106.77;AC=3;AF=0.25;AN=12;AO=148;CIGAR=1X;DP=1412;DPB=1412;DPRA=4.84848;EPP=324.388;EPPR=2747.75;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5537;QR=47109;RO=1264;RPL=0;RPP=324.388;RPPR=2747.75;RPR=148;RUN=1;SAF=0;SAP=324.388;SAR=148;SRF=0;SRP=2747.75;SRR=1264;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:316:300,16:300:11087:16:603:0,-40.5197,-942.865 0/1:503:429,74:429:15939:74:2778:-98.7946,0,-1282.41 0/1:188:167,21:167:6229:21:784:-14.2901,0,-503.983 0/1:273:236,37:236:8866:37:1372:-41.5798,0,-715.542 0/0:28:28,0:28:1065:0:0:0,-8.42884,-96.156 0/0:104:104,0:104:3923:0:0:0,-31.3071,-353.177 dDocent_Contig_3386 12 . A C 46118 . AB=0.375853;ABP=571.827;AC=6;AF=0.5;AN=12;AO=1597;CIGAR=3X;DP=4249;DPB=4249;DPRA=0;EPP=3470.85;EPPR=4721.62;GTI=0;LEN=1;MEANALT=3.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=62698;QR=85529;RO=2173;RPL=0;RPP=3470.85;RPPR=4721.62;RPR=1597;RUN=1;SAF=1597;SAP=3470.85;SAR=0;SRF=2173;SRP=4721.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:154:61,13,80:61:2405:13,80:511,3173:-242.816,-219.151,-413.097,0,-155.833,-173.779 0|1:460:144,172,142:144:5682:172,142:6689,5570:-506.276,0,-415.725,-91.5839,-9.46484,-516.342 0|1:274:190,20,64:190:7558:20,64:792,2511:-149.288,-141.303,-757.564,0,-557.099,-603.013 0|1:385:144,124,116:144:5674:124,116:4908,4554:-360.573,0,-429.443,-29.4129,-92.2612,-461.262 0|1:1580:858,54,665:858:33770:54,665:2088,26122:-1890.03,-1976.84,-4738.44,0,-2606.4,-2577.68 0|1:1396:776,86,530:776:30440:86,530:3363,20768:-1474.05,-1431.18,-3908.46,0,-2226.7,-2343.63 dDocent_Contig_3387 11 . G T 41.5363 . AB=0.166667;ABP=20.3821;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=165;DPB=165;DPRA=1.14286;EPP=16.0391;EPPR=343.931;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=59.5159;NS=6;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=0.77707;PAO=0;PQA=0;PQR=0;PRO=0;QA=241;QR=6234;RO=157;RPL=0;RPP=16.0391;RPPR=343.931;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=157;SRP=343.931;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:22,1:22:887:1:40:0,-2.92801,-76.1415 0/0:47:44,2:44:1717:2:82:0,-6.47716,-146.973 0/1:18:15,3:15:611:3:119:-5.67647,0,-49.9085 0/0:23:23,0:23:908:0:0:0,-6.92369,-78.6785 0/0:27:26,0:26:1051:0:0:0,-7.82678,-94.5674 0/0:27:27,0:27:1060:0:0:0,-8.12781,-95.6875 dDocent_Contig_3388 7 . C A 1797.13 . AB=0.171924;ABP=595.733;AC=3;AF=0.25;AN=12;AO=153;CIGAR=1X;DP=1415;DPB=1415;DPRA=0;EPP=335.246;EPPR=2743.41;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995246;PAO=0;PQA=0;PQR=0;PRO=0;QA=5846;QR=48614;RO=1262;RPL=0;RPP=335.246;RPPR=2743.41;RPR=153;RUN=1;SAF=153;SAP=335.246;SAR=0;SRF=1262;SRP=2743.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:302:292,10:292:11244:10:370:0,-57.263,-977.865 0/0:257:235,22:235:9051:22:849:0,-0.631692,-737.568 0/1:205:179,26:179:6914:26:991:-27.7889,0,-560.413 0/1:246:207,39:207:7975:39:1493:-60.5916,0,-643.491 0/0:222:210,12:210:8052:12:461:0,-24.9879,-682.632 0/1:183:139,44:139:5378:44:1682:-96.5544,0,-428.912 dDocent_Contig_3389 32 . T A 340.623 . AB=0.102113;ABP=784.068;AC=2;AF=0.166667;AN=12;AO=96;CIGAR=1X;DP=1985;DPB=1985;DPRA=0.437239;EPP=211.472;EPPR=4102.75;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.989583;PAIREDR=0.994174;PAO=0;PQA=0;PQR=0;PRO=0;QA=3765;QR=75381;RO=1888;RPL=0;RPP=211.472;RPPR=4102.75;RPR=96;RUN=1;SAF=96;SAP=211.472;SAR=0;SRF=1888;SRP=4102.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:192:188,4:188:7537:4:157:0,-43.2901,-663.423 0/1:285:261,24:261:10441:24:952:-0.187261,0,-853.187 0/0:101:97,4:97:3837:4:158:0,-15.8047,-330.726 0/1:283:249,34:249:9957:34:1339:-35.5841,0,-810.286 0/0:623:622,0:622:24767:0:0:0,-187.241,-2226.47 0/0:501:471,30:471:18842:30:1159:0,-46.2365,-1589.63 dDocent_Contig_3391 9 . A T 33.5177 . AB=0.109091;ABP=76.0113;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=221;DPB=221;DPRA=1.37405;EPP=18.2106;EPPR=467.705;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.663551;PAO=0;PQA=0;PQR=0;PRO=0;QA=273;QR=8140;RO=214;RPL=0;RPP=18.2106;RPPR=467.705;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=214;SRP=467.705;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:31,0:31:1190:0:0:0,-9.33193,-107.397 0/0:39:39,0:39:1492:0:0:0,-11.7402,-134.555 0/0:21:21,0:21:808:0:0:0,-6.32163,-73.046 0/0:40:40,0:40:1497:0:0:0,-12.0412,-135 0/0:35:34,1:34:1284:1:39:0,-6.63949,-111.952 0/1:55:49,6:49:1869:6:234:-4.87445,0,-151.904 dDocent_Contig_3392 24 . A T 1273.4 . AB=0.137982;ABP=770.255;AC=1;AF=0.0833333;AN=12;AO=238;CIGAR=1X;DP=4452;DPB=4452;DPRA=0;EPP=519.821;EPPR=9149.25;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9450;QR=168210;RO=4212;RPL=0;RPP=519.821;RPPR=9149.25;RPR=238;RUN=1;SAF=238;SAP=519.821;SAR=0;SRF=4212;SRP=9149.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:696:647,49:647:25915:49:1966:0,-32.3812,-2152.87 0/0:713:659,53:659:26318:53:2116:0,-24.1181,-2175.61 0/0:444:412,32:412:16372:32:1269:0,-19.1762,-1357.7 0/1:674:581,93:581:23251:93:3686:-128.863,0,-1887.63 0/0:1016:1005,10:1005:40076:10:375:0,-271.822,-3568.96 0/0:909:908,1:908:36278:1:38:0,-269.839,-3257.82 dDocent_Contig_3393 21 . G A 1088.6 . AB=0.20073;ABP=216.163;AC=3;AF=0.25;AN=12;AO=59;CIGAR=1X;DP=526;DPB=526;DPRA=0.968889;EPP=131.127;EPPR=1017.09;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.991435;PAO=0;PQA=0;PQR=0;PRO=0;QA=2334;QR=18452;RO=467;RPL=0;RPP=131.127;RPPR=1017.09;RPR=59;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=467;SRP=1017.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:66:65,1:65:2571:1:40:0,-15.8723,-227.527 0/0:96:93,3:93:3677:3:121:0,-17.6187,-319.681 0/1:99:90,9:90:3554:9:354:-2.41719,0,-290.093 0/0:90:90,0:90:3527:0:0:0,-27.0927,-317.468 0/1:66:35,31:35:1379:31:1235:-91.5559,0,-104.5 0/1:109:94,15:94:3744:15:584:-20.0824,0,-304.165 dDocent_Contig_3394 8 . C T 4138.23 . AB=0.175872;ABP=1258.65;AC=4;AF=0.333333;AN=12;AO=298;CIGAR=1X;DP=2265;DPB=2265;DPRA=0;EPP=650.109;EPPR=4267.78;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999491;PAO=0;PQA=0;PQR=0;PRO=0;QA=11412;QR=75350;RO=1964;RPL=0;RPP=650.109;RPPR=4267.78;RPR=298;RUN=1;SAF=298;SAP=650.109;SAR=0;SRF=1964;SRP=4267.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:351:292,58:292:11190:58:2223:-94.5534,0,-900.927 0/1:426:358,68:358:13733:68:2621:-107.843,0,-1107.1 0/1:262:234,28:234:8932:28:1070:-17.7337,0,-724.743 0/1:337:249,88:249:9601:88:3358:-200.915,0,-762.31 0/0:513:480,32:480:18413:32:1217:0,-44.5764,-1546.38 0/0:376:351,24:351:13481:24:923:0,-29.611,-1129.3 dDocent_Contig_3395 16 . G C 2410.33 . AB=0.133858;ABP=1629.72;AC=2;AF=0.166667;AN=12;AO=268;CIGAR=2X;DP=3872;DPB=3872;DPRA=0.814941;EPP=584.965;EPPR=7815.97;GTI=0;LEN=1;MEANALT=1.8;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99861;PAO=0;PQA=0;PQR=0;PRO=0;QA=10572;QR=141347;RO=3598;RPL=0;RPP=584.965;RPPR=7815.97;RPR=268;RUN=1;SAF=268;SAP=584.965;SAR=0;SRF=3598;SRP=7815.97;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:565:511,53:511:19946:53:2097:-18.728,0,-1623.48 0|1:832:696,134:696:27323:134:5288:-225.527,0,-2206.59 0|0:335:309,25:309:12155:25:995:0,-11.0945,-1003.32 0|0:666:613,53:613:24221:53:2075:0,-13.5408,-1990.97 0|0:763:762,0:762:30060:0:0:0,-229.385,-2702.63 0|0:711:707,3:707:27642:3:117:0,-203.225,-2474.65 dDocent_Contig_3396 8 . T G 309.253 . AB=0.143646;ABP=202.654;AC=2;AF=0.166667;AN=12;AO=26;CIGAR=1X;DP=531;DPB=531;DPRA=1.03429;EPP=59.4686;EPPR=1095.26;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.846154;PAIREDR=0.954274;PAO=0;PQA=0;PQR=0;PRO=0;QA=979;QR=19317;RO=503;RPL=0;RPP=59.4686;RPPR=1095.26;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=503;SRP=1095.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:101:101,0:101:3887:0:0:0,-30.404,-349.928 0/0:123:123,0:123:4719:0:0:0,-37.0267,-424.746 0/0:43:43,0:43:1649:0:0:0,-12.9443,-148.673 0/0:83:83,0:83:3201:0:0:0,-24.9855,-288.238 0/1:58:43,14:43:1651:14:522:-29.7821,0,-131.313 0/1:123:110,12:110:4210:12:457:-4.36473,0,-341.864 dDocent_Contig_3397 22 . T A 4356.53 . AB=0.0528846;ABP=2531.23;AC=3;AF=0.25;AN=12;AO=80;CIGAR=1X5M;DP=2807;DPB=2807;DPRA=1.06816;EPP=176.728;EPPR=5138.54;GTI=0;LEN=1;MEANALT=5.75;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3128;QR=92714;RO=2365;RPL=0;RPP=176.728;RPPR=5138.54;RPR=80;RUN=1;SAF=80;SAP=176.728;SAR=0;SRF=2365;SRP=5138.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:382:339,38,2,3:339:13303:38,2,3:1471,80,121:-18.7614,0,-1082.59,-114.22,-1087.44,-1207.66,-110.835,-1084.05,-1198.29,-1203.97 0|0:440:426,12,0,0:426:16650:12,0,0:465,0,0:0,-89.9257,-1455.23,-128.239,-1458.85,-1497.05,-128.239,-1458.85,-1497.05,-1497.05 0|0:455:430,25,0,0:430:16846:25,0,0:997,0,0:0,-46.9377,-1424.99,-129.443,-1432.52,-1514.62,-129.443,-1432.52,-1514.62,-1514.62 0|0:456:425,22,0,3:425:16672:22,0,3:855,0,118:0,-57.6216,-1422.11,-127.938,-1428.73,-1498.99,-118.228,-1419.03,-1489.28,-1488.38 0|1:535:330,127,34,40:330:12957:127,34,40:4979,1330,1523:-310.107,0,-1027.4,-300.099,-956.284,-1355.49,-284.559,-940.743,-1240.84,-1338.14 0|1:539:415,74,0,34:415:16286:74,0,34:2883,0,1366:-112.006,0,-1317.08,-236.934,-1339.36,-1576.29,-124.365,-1226.79,-1463.73,-1453.49 dDocent_Contig_3398 19 . A G 303.957 . AB=0.265306;ABP=26.4533;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=357;DPB=357;DPRA=1.02841;EPP=46.4397;EPPR=732.625;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=767;QR=13267;RO=336;RPL=0;RPP=46.4397;RPPR=732.625;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=336;SRP=732.625;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:57,2:57:2242:2:61:0,-11.9684,-196.159 0/0:73:68,5:68:2709:5:191:0,-4.41928,-226.375 0/1:49:35,13:35:1397:13:515:-31.9186,0,-111.216 0/0:62:62,0:62:2448:0:0:0,-18.6639,-220.478 0/0:58:58,0:58:2277:0:0:0,-17.4597,-205.1 0/0:56:56,0:56:2194:0:0:0,-16.8577,-197.641 dDocent_Contig_3399 49 . A G 30874 . AB=0.882514;ABP=468.156;AC=10;AF=0.833333;AN=12;AO=941;CIGAR=1X;DP=1019;DPB=1019;DPRA=0;EPP=15.3076;EPPR=163.811;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997875;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=36923;QR=2952;RO=78;RPL=507;RPP=15.3076;RPPR=163.811;RPR=434;RUN=1;SAF=941;SAP=2046.37;SAR=0;SRF=78;SRP=172.385;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:145:16,129:16:583:129:5102:-415.408,0,-9.14838 1/1:129:9,120:9:333:120:4728:-395.132,-8.5164,0 1/1:147:7,140:7:272:140:5559:-475.311,-19.4045,0 1/1:176:4,172:4:150:172:6765:-594.714,-39.118,0 0/1:221:27,194:27:1040:194:7510:-609.06,0,-27.3785 1/1:201:15,186:15:574:186:7259:-600.992,-8.50958,0 dDocent_Contig_3401 19 . A C 1635.14 . AB=0.147256;ABP=810.347;AC=5;AF=0.416667;AN=12;AO=119;CIGAR=1X;DP=914;DPB=914;DPRA=0;EPP=261.416;EPPR=1727.16;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.92437;PAIREDR=0.939547;PAO=0;PQA=0;PQR=0;PRO=0;QA=4742;QR=31695;RO=794;RPL=0;RPP=261.416;RPPR=1727.16;RPR=119;RUN=1;SAF=119;SAP=261.416;SAR=0;SRF=794;SRP=1727.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:122:102,20:102:4077:20:792:-34.8684,0,-330.183 0/0:167:158,9:158:6331:9:341:0,-19.2355,-538.487 0/1:130:114,16:114:4559:16:652:-19.8783,0,-371.093 0/1:199:170,29:170:6721:29:1163:-45.042,0,-544.683 0/1:128:113,14:113:4512:14:566:-12.7356,0,-367.477 0/1:168:137,31:137:5495:31:1228:-60.2115,0,-443.781 dDocent_Contig_3402 46 . A G 90.488 . AB=0.0874233;ABP=966.998;AC=2;AF=0.166667;AN=12;AO=77;CIGAR=1X;DP=1475;DPB=1475;DPRA=1.09287;EPP=122.159;EPPR=3025.71;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994269;PAO=0;PQA=0;PQR=0;PRO=0;QA=3079;QR=54754;RO=1396;RPL=71;RPP=122.159;RPPR=3025.71;RPR=6;RUN=1;SAF=77;SAP=170.214;SAR=0;SRF=1396;SRP=3034.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:254:254,0:254:9911:0:0:0,-76.4616,-891.403 0/1:314:287,26:287:11365:26:1048:-0.296393,0,-927.804 0/0:105:101,4:101:3953:4:161:0,-16.7333,-340.91 0/1:338:307,31:307:11998:31:1245:-10.5702,0,-977.324 0/0:255:239,16:239:9328:16:625:0,-20.1795,-782.434 0/0:209:208,0:208:8199:0:0:0,-62.6142,-737.428 dDocent_Contig_3403 88 . T C 759.399 . AB=0.152993;ABP=474.711;AC=4;AF=0.333333;AN=12;AO=69;CIGAR=1X;DP=662;DPB=662;DPRA=1.06872;EPP=152.842;EPPR=1290.69;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994941;PAO=0;PQA=0;PQR=0;PRO=0;QA=2418;QR=20580;RO=593;RPL=69;RPP=152.842;RPPR=1290.69;RPR=0;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=593;SRP=1290.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:91:78,13:78:2661:13:444:-12.8932,0,-212.351 0/1:104:93,11:93:3162:11:383:-3.49782,0,-253.512 0/1:157:126,31:126:4434:31:1097:-51.7771,0,-351.978 0/1:99:85,14:85:2933:14:494:-14.9914,0,-234.406 0/0:99:99,0:99:3412:0:0:0,-29.802,-307.311 0/0:112:112,0:112:3978:0:0:0,-33.7154,-358.216 dDocent_Contig_3404 13 . G C 57950.6 . AB=0.725266;ABP=582.175;AC=11;AF=0.916667;AN=12;AO=1623;CIGAR=1X1M;DP=2010;DPB=2010;DPRA=0;EPP=3527.31;EPPR=330.903;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.998152;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=65399;QR=5795;RO=151;RPL=0;RPP=3527.31;RPPR=330.903;RPR=1623;RUN=1;SAF=1623;SAP=3527.31;SAR=0;SRF=151;SRP=330.903;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:338:28,99,211:28:1072:99,211:3952,8495:-929.195,-612.16,-670.327,-237.51,0,-261.96 1|1:387:35,38,312:35:1360:38,312:1532,12600:-1042.69,-926.95,-1027.26,-14.539,0,-32.3662 1|1:230:30,36,164:30:1148:36,164:1456,6610:-561.637,-450.625,-533.99,-25.8593,0,-70.6853 0|1:359:51,42,266:51:1946:42,266:1691,10712:-867.488,-743.476,-890.468,0,-20.2531,-79.5532 1|1:340:0,0,338:0:0:0,338:0,13622:-1224.49,-1224.49,-1224.49,-101.748,-101.748,0 1|1:356:7,14,332:7:269:14,332:556,13360:-1176.78,-1133.11,-1150.98,-77.8639,-54.168,0 dDocent_Contig_3405 98 . N T 1320.11 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=43;CIGAR=1X;DP=43;DPB=43;DPRA=0;EPP=96.3836;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1446;QR=0;RO=0;RPL=43;RPP=96.3836;RPPR=0;RPR=0;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:6:0,6:0:0:6:193:-17.6859,-1.80618,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:93:-8.67792,-0.90309,0 1/1:33:0,33:0:0:33:1126:-101.646,-9.93399,0 dDocent_Contig_3406 7 . C A 22953.8 . AB=0.312479;ABP=915.945;AC=6;AF=0.5;AN=12;AO=934;CIGAR=1X;DP=2989;DPB=2989;DPRA=0;EPP=2031.17;EPPR=4458.87;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997076;PAO=0;PQA=0;PQR=0;PRO=0;QA=35625;QR=79074;RO=2052;RPL=0;RPP=2031.17;RPPR=4458.87;RPR=934;RUN=1;SAF=934;SAP=2031.17;SAR=0;SRF=2052;SRP=4458.87;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:477:314,162:314:12117:162:6218:-416.165,0,-946.622 0/1:600:382,218:382:14704:218:8269:-563.395,0,-1142.04 0/1:377:262,115:262:10091:115:4401:-282.665,0,-794.328 0/1:584:378,206:378:14538:206:7901:-535.1,0,-1131.93 0/1:389:314,74:314:12133:74:2811:-136.26,0,-974.532 0/1:562:402,159:402:15491:159:6025:-373.013,0,-1224.23 dDocent_Contig_3407 17 . G A 80369.8 . AB=0.859599;ABP=395.002;AC=11;AF=0.916667;AN=12;AO=2343;CIGAR=2X1M1X;DP=2635;DPB=2635;DPRA=0;EPP=5090.77;EPPR=144.156;GTI=0;LEN=1;MEANALT=5.66667;MQM=59.9603;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.997012;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=91956;QR=2594;RO=65;RPL=0;RPP=5090.77;RPPR=144.156;RPR=2343;RUN=1;SAF=2343;SAP=5090.77;SAR=0;SRF=65;SRP=144.156;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:349:29,0,300,0:29:1165:0,300,0:0,11754,0:-957.759,-966.488,-1062.49,0,-96.0078,-5.69877,-966.488,-1062.49,-96.0078,-1062.49 1|1:474:11,3,432,12:11:432:3,432,12:112,16961,478:-1485.9,-1480.04,-1514.66,-94.5165,-120.878,0,-1449.85,-1476.21,-90.6832,-1481.76 1|1:259:4,0,233,3:4:160:0,233,3:0,9210,117:-813.655,-814.859,-828.039,-56.956,-70.14,0,-805.243,-818.423,-60.522,-817.52 1|1:417:5,5,380,0:5:197:5,380,0:199,14885,0:-1318.88,-1304,-1318.7,-98.1849,-98.0046,0,-1320.39,-1320.21,-114.391,-1336.59 1|1:650:14,14,571,34:14:559:14,571,34:542,22363,1333:-1960.38,-1920.09,-1961.91,-125.848,-127.377,0,-1854.99,-1856.52,-62.2816,-1890.79 1|1:486:2,32,427,12:2:81:32,427,12:1266,16783,476:-1501.63,-1398.05,-1395.1,-121.86,-24.3507,0,-1463.05,-1365.55,-89.3561,-1466.12 dDocent_Contig_3409 83 . G A 38810.2 . AB=0.463574;ABP=43.5082;AC=6;AF=0.5;AN=12;AO=1629;CIGAR=1X2M1X;DP=3514;DPB=3514;DPRA=0;EPP=3540.34;EPPR=3805.26;GTI=0;LEN=1;MEANALT=6.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.996931;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=54567;QR=58192;RO=1751;RPL=1629;RPP=3540.34;RPPR=3805.26;RPR=0;RUN=1;SAF=1629;SAP=3540.34;SAR=0;SRF=1751;SRP=3805.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:417:200,209,7:200:6562:209,7:7004,222:-507.056,0,-467.293,-549.395,-512.341,-1077.48 0|1:503:283,170,43:283:9367:170,43:5700,1393:-376.484,0,-706.421,-349.293,-645.213,-1093.93 0|1:301:108,159,32:108:3618:159,32:5398,1039:-405.287,0,-245.152,-353.956,-209.173,-637.321 0|1:567:238,310,16:238:7830:310,16:10248,516:-757.071,0,-539.529,-787.107,-591.238,-1415.12 0|1:846:434,396,1:434:14487:396,1:13269,28:-944.077,0,-1053.67,-1072.51,-1170.66,-2244.96 0|1:880:488,385,0:488:16328:385,0:12948,0:-902.267,0,-1206.37,-1049.17,-1322.27,-2371.3 dDocent_Contig_3410 45 . T G 138.719 . AB=0.110345;ABP=194.235;AC=1;AF=0.0833333;AN=12;AO=39;CIGAR=1X;DP=848;DPB=848;DPRA=1.49061;EPP=79.2345;EPPR=1759.73;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.923077;PAIREDR=0.986403;PAO=0;PQA=0;PQR=0;PRO=0;QA=1559;QR=32349;RO=809;RPL=1;RPP=79.2345;RPPR=1759.73;RPR=38;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=809;SRP=1759.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:145:129,16:129:5146:16:649:-15.0938,0,-419.361 0/0:168:167,1:167:6720:1:27:0,-47.8733,-601.779 0/0:122:114,8:114:4550:8:320:0,-7.55799,-380.246 0/0:200:186,14:186:7463:14:563:0,-9.19311,-620.267 0/0:92:92,0:92:3683:0:0:0,-27.6948,-331.48 0/0:121:121,0:121:4787:0:0:0,-36.4246,-430.731 dDocent_Contig_3411 17 . G T 1813.83 . AB=0.777778;ABP=27.1378;AC=3;AF=0.25;AN=12;AO=54;CIGAR=1X;DP=257;DPB=257;DPRA=0.809859;EPP=120.27;EPPR=443.819;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2184;QR=8067;RO=203;RPL=0;RPP=120.27;RPPR=443.819;RPR=54;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=203;SRP=443.819;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:1021:0:0:0,-7.82678,-92.1864 0/0:64:64,0:64:2548:0:0:0,-19.2659,-229.463 0/0:52:52,0:52:2046:0:0:0,-15.6536,-184.32 0/0:54:53,1:53:2128:1:41:0,-12.1611,-187.6 1/1:25:0,25:0:0:25:1007:-90.9237,-7.52575,0 0/1:36:8,28:8:324:28:1136:-91.6814,0,-18.6917 dDocent_Contig_3413 7 . G A 795.916 . AB=0.28;ABP=55.5599;AC=3;AF=0.25;AN=12;AO=37;CIGAR=1X;DP=188;DPB=188;DPRA=2.26471;EPP=83.3548;EPPR=326.56;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=57.8389;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.946309;PAO=0;PQA=0;PQR=0;PRO=0;QA=1421;QR=4914;RO=149;RPL=0;RPP=83.3548;RPPR=326.56;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=149;SRP=326.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:726:0:0:0,-6.62266,-65.6337 0/1:42:32,9:32:1100:9:343:-18.7474,0,-82.3092 0/1:22:11,11:11:360:11:427:-32.1624,0,-26.0896 0/1:61:45,15:45:1455:15:575:-33.9036,0,-112.4 0/0:12:12,0:12:390:0:0:0,-3.61236,-35.4059 0/0:29:27,2:27:883:2:76:0,-1.5152,-67.8268 dDocent_Contig_3414 23 . T G 21153.3 . AB=0.818293;ABP=724.585;AC=6;AF=0.5;AN=12;AO=671;CIGAR=1X;DP=820;DPB=820;DPRA=0;EPP=1460.07;EPPR=322.217;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=26369;QR=5846;RO=147;RPL=0;RPP=1460.07;RPPR=322.217;RPR=671;RUN=1;SAF=671;SAP=1460.07;SAR=0;SRF=147;SRP=322.217;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:108:23,85:23:913:85:3357:-269.688,0,-49.9658 0/1:97:31,65:31:1230:65:2537:-199.476,0,-81.9645 0/1:144:30,114:30:1204:114:4502:-361.775,0,-65.2849 0/1:63:10,53:10:402:53:2070:-167.535,0,-17.5746 0/1:241:25,215:25:984:215:8431:-686.02,0,-16.4989 0/1:167:28,139:28:1113:139:5472:-442.059,0,-50.177 dDocent_Contig_3415 19 . T C 44477.3 . AB=0.190245;ABP=4291.67;AC=6;AF=0.5;AN=12;AO=979;CIGAR=1X3M;DP=5896;DPB=5896;DPRA=0;EPP=2128.88;EPPR=8387.07;GTI=0;LEN=1;MEANALT=4.6;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.998979;PAIREDR=0.999482;PAO=0;PQA=0;PQR=0;PRO=0;QA=38999;QR=151897;RO=3861;RPL=0;RPP=2128.88;RPPR=8387.07;RPR=979;RUN=1;SAF=979;SAP=2128.88;SAR=0;SRF=3861;SRP=8387.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:750:597,150,0:597:23504:150,0:5901,0:-305.699,0,-1888.28,-485.414,-1933.44,-2418.83 0|1:975:696,244,31:696:27425:244,31:9692,1219:-588.377,0,-2182.68,-697.629,-2155.86,-2944.42 0|1:601:406,166,27:406:16047:166,27:6541,1074:-415.885,0,-1270.5,-449.678,-1232.05,-1762.03 0|1:964:718,243,1:718:28254:243,1:9496,40:-564.458,0,-2250.9,-777.302,-2320.76,-3101.07 0|1:1315:658,117,537:658:25763:117,537:4565,21385:-1562.73,-1385.6,-3468.57,0,-1742.99,-1956.55 0|1:1291:786,120,383:786:30904:120,383:4735,15281:-1021.8,-868.833,-3374.57,0,-2152.28,-2426.57 dDocent_Contig_3416 12 . G A 59.0719 . AB=0.102564;ABP=163.532;AC=1;AF=0.0833333;AN=12;AO=30;CIGAR=1X;DP=690;DPB=690;DPRA=0;EPP=68.1545;EPPR=1427.51;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9955;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.989394;PAO=0;PQA=0;PQR=0;PRO=0;QA=1194;QR=26210;RO=660;RPL=0;RPP=68.1545;RPPR=1436.18;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=659;SRP=1427.51;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:68:67,1:67:2652:1:40:0,-16.4744,-234.822 0/0:78:75,3:75:2957:3:122:0,-12.1078,-254.854 0/0:60:58,2:58:2302:2:73:0,-11.1307,-200.411 0/1:117:105,12:105:4164:12:470:-7.43007,0,-339.524 0/0:217:210,7:210:8376:7:285:0,-39.2991,-727.354 0/0:150:145,5:145:5759:5:204:0,-26.4105,-499.387 dDocent_Contig_3417 40 . C A 642.15 . AB=0.165323;ABP=244.289;AC=2;AF=0.166667;AN=12;AO=41;CIGAR=1X;DP=800;DPB=800;DPRA=0.898551;EPP=92.0407;EPPR=1648.99;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1572;QR=29427;RO=758;RPL=0;RPP=92.0407;RPPR=1648.99;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=758;SRP=1648.99;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:276:276,0:276:10776:0:0:0,-83.0843,-969.222 0/1:189:157,32:157:6171:32:1234:-54.437,0,-498.29 0/1:59:50,9:50:1897:9:338:-12.9998,0,-153.175 0/0:126:125,0:125:4881:0:0:0,-37.6287,-438.818 0/0:86:86,0:86:3260:0:0:0,-25.8886,-293.476 0/0:64:64,0:64:2442:0:0:0,-19.2659,-219.938 dDocent_Contig_3418 1 . N G 177.383 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=8.07091;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=193;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:193:-17.7382,-1.50515,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_3419 64 . G C 1197.55 . AB=0.0769231;ABP=184.913;AC=0;AF=0;AN=12;AO=9;CIGAR=2M1X2M;DP=357;DPB=342.6;DPRA=1.00862;EPP=22.5536;EPPR=578.45;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.222222;PAIREDR=0.607547;PAO=0;PQA=0;PQR=0;PRO=0;QA=358;QR=9526;RO=265;RPL=8;RPP=14.8328;RPPR=3.21516;RPR=1;RUN=1;SAF=8;SAP=14.8328;SAR=1;SRF=130;SRP=3.21516;SRR=135;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:47:33,0,2,12:33:1160:0,2,12:0,75,432:-25.3001,-35.2341,-129.637,-29.0891,-123.493,-122.891,0,-94.3882,-88.244,-90.7758 0|0:71:39,15,0,17:39:1437:15,0,17:512,0,624:-39.2783,-9.48658,-122.479,-51.0185,-126.995,-168.533,0,-75.9905,-117.527,-112.409 0|0:45:37,0,0,8:37:1360:0,0,8:0,0,280:-11.9926,-23.1307,-134.322,-23.1307,-134.322,-134.322,0,-111.544,-111.544,-109.136 0|0:70:51,9,7,3:51:1843:9,7,3:292,283,108:-8.17928,0,-147.677,-0.173803,-127.049,-148.5,-14.7208,-141.576,-141.796,-164.23 0|0:66:47,0,0,19:47:1660:0,0,19:0,0,708:-44.1802,-58.3286,-193.475,-58.3286,-193.475,-193.475,0,-135.513,-135.513,-129.793 0|0:58:58,0,0,0:58:2066:0,0,0:0,0,0:0,-17.4597,-186.182,-17.4597,-186.182,-186.182,-17.4597,-186.182,-186.182,-186.182 dDocent_Contig_3420 49 . G A 319.467 . AB=0.150327;ABP=165.502;AC=2;AF=0.166667;AN=12;AO=37;CIGAR=1X;DP=476;DPB=476;DPRA=0.99;EPP=83.3548;EPPR=936.763;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.756757;PAIREDR=0.912442;PAO=0;PQA=0;PQR=0;PRO=0;QA=1446;QR=16724;RO=434;RPL=0;RPP=83.3548;RPPR=936.763;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=434;SRP=945.429;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:77:61,13:61:2403:13:506:-23.2254,0,-193.791 0/0:104:99,5:99:3779:5:198:0,-13.1097,-321.99 0/0:67:61,4:61:2351:4:158:0,-5.3545,-197.175 0/0:72:67,5:67:2532:5:201:0,-3.20364,-209.576 0/0:80:80,0:80:3128:0:0:0,-24.0824,-281.638 0/1:76:66,10:66:2531:10:383:-11.9431,0,-205.085 dDocent_Contig_3421 12 . C T 2253.56 . AB=0.110465;ABP=456.394;AC=3;AF=0.25;AN=12;AO=42;CIGAR=3M1X;DP=658;DPB=658;DPRA=0;EPP=94.2121;EPPR=932.4;GTI=0;LEN=1;MEANALT=3.75;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.992991;PAO=0;PQA=0;PQR=0;PRO=0;QA=1646;QR=16647;RO=428;RPL=0;RPP=94.2121;RPPR=932.4;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=428;SRP=932.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:135:82,14,16,21,2:82:3196:14,16,21,2:549,624,795,82:-40.4813,-20.016,-278.484,-13.8734,-231.407,-271.739,0,-217.529,-211.387,-256.356,-58.3967,-275.93,-269.787,-255.909,-320.476 0|0:101:73,7,5,16,0:73:2846:7,5,16,0:274,190,605,0:-27.6126,-27.0551,-258.882,-34.007,-245.408,-266.433,0,-211.398,-218.347,-229.111,-49.5878,-260.989,-267.938,-233.928,-283.519 0|1:81:52,17,10,2,0:52:2024:17,10,2,0:660,398,78,0:-38.5704,0,-161.206,-21.4485,-133.549,-184.768,-47.8124,-159.911,-181.366,-213.538,-54.224,-166.323,-187.778,-214.14,-220.551 0|0:132:107,9,9,3,4:107:4161:9,9,3,4:333,354,108,146:0,-4.97886,-344.208,-3.08082,-317.797,-342.321,-23.4021,-338.107,-336.221,-364.438,-20.2853,-334.991,-333.104,-353.415,-361.02 0|1:122:61,32,0,5,24:61:2379:32,0,5,24:1249,0,194,948:-84.3093,0,-185.91,-102.672,-195.543,-298.216,-86.7324,-179.603,-282.276,-280.771,-24.6723,-117.543,-220.217,-204.277,-212.993 0|1:87:53,19,1,2,12:53:2041:19,1,2,12:726,39,77,470:-43.6043,0,-161.839,-56.3529,-164.353,-223.614,-53.2365,-161.236,-217.593,-220.197,-20.9166,-128.918,-185.275,-182.159,-184.869 dDocent_Contig_3422 19 . C G 29197.1 . AB=0.761741;ABP=522.495;AC=8;AF=0.666667;AN=12;AO=904;CIGAR=1X;DP=1112;DPB=1112;DPRA=0;EPP=1966.02;EPPR=452.505;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=35453;QR=8085;RO=207;RPL=0;RPP=1966.02;RPPR=452.505;RPR=904;RUN=1;SAF=904;SAP=1966.02;SAR=0;SRF=207;SRP=452.505;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:231:26,205:26:1015:205:8046:-654.245,0,-22.1148 0/1:268:113,155:113:4397:155:5979:-457.289,0,-315.064 0/1:153:28,124:28:1109:124:4916:-396.188,0,-53.944 0/1:221:40,181:40:1564:181:7149:-576.613,0,-74.4869 1/1:81:0,81:0:0:81:3172:-285.581,-24.3834,0 1/1:158:0,158:0:0:158:6191:-557.013,-47.5627,0 dDocent_Contig_3423 28 . G A 27380.7 . AB=0.14121;ABP=1554.98;AC=0;AF=0;AN=12;AO=196;CIGAR=1X1M2X2M;DP=1388;DPB=1388;DPRA=0;EPP=428.619;EPPR=137.642;GTI=0;LEN=1;MEANALT=9.16667;MQM=59.7806;MQMR=59.7097;NS=6;NUMALT=6;ODDS=0;PAIRED=0;PAIREDR=0.564516;PAO=0;PQA=0;PQR=0;PRO=0;QA=7684;QR=2423;RO=62;RPL=0;RPP=428.619;RPPR=137.642;RPR=196;RUN=1;SAF=196;SAP=428.619;SAR=0;SRF=62;SRP=137.642;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:188:13,8,29,5,1,62,62:13:514:8,29,5,1,62,62:304,1152,196,16,2410,2409:-346.045,-325.03,-364.922,-255.117,-272.49,-288.688,-336.349,-353.721,-283.809,-377.144,-348.82,-366.193,-296.28,-377.511,-390.82,-153.984,-171.357,-101.442,-182.676,-195.147,-177.621,-153.675,-171.048,-101.133,-182.367,-194.838,0,-177.311 0|0:294:10,5,54,9,1,94,110:10:396:5,54,9,1,94,110:195,2140,354,41,3694,4170:-604.093,-591.074,-622.129,-431.028,-447.559,-447.332,-582.042,-598.573,-438.527,-611.893,-603.726,-620.257,-460.211,-611.225,-635.985,-305.381,-321.912,-161.863,-312.881,-334.564,-309.644,-269.16,-285.691,-125.645,-276.66,-298.343,0,-268.606 0|0:272:15,3,56,8,3,73,100:15:583:3,56,8,3,73,100:103,2192,321,116,2883,3749:-484.846,-481.001,-528,-309.158,-348.701,-340.203,-471.219,-510.761,-338.919,-516.713,-480.007,-519.549,-347.707,-509.767,-527.006,-253.895,-293.438,-121.592,-283.657,-292.444,-279.823,-187.564,-227.106,-55.2637,-217.326,-226.112,0,-205.363 0|0:223:15,2,33,12,0,78,77:15:576:2,33,12,0,78,77:80,1278,463,0,3043,2913:-432.815,-430.741,-477.412,-332.38,-373.063,-369.719,-401.919,-442.602,-344.241,-445.58,-437.331,-478.014,-379.653,-449.192,-484.604,-189.559,-230.242,-131.88,-201.421,-236.832,-213.352,-200.5,-241.183,-142.822,-212.362,-247.773,0,-224.594 0|0:220:6,13,12,15,0,50,103:6:235:13,12,15,0,50,103:510,478,565,0,1987,3996:-467.889,-427.755,-443.166,-430.334,-407.718,-446.046,-427.101,-404.484,-407.064,-441.909,-469.696,-447.079,-449.659,-446.425,-489.02,-307.107,-284.491,-287.07,-283.837,-326.431,-311.38,-143.268,-120.652,-123.231,-120,-162.593,0,-131.586 0|0:191:3,5,12,10,14,47,91:3:119:5,12,10,14,47,91:197,444,396,520,1822,3402:-413.606,-398.301,-406.592,-378.203,-371.791,-384.387,-382.088,-375.677,-355.578,-388.874,-372.609,-366.197,-346.099,-349.984,-378.19,-266.592,-260.18,-240.082,-243.967,-234.488,-262.24,-138.12,-131.709,-111.611,-115.495,-106.018,0,-120.523 dDocent_Contig_3424 113 . A G 86.4495 . AB=0.175;ABP=39.7082;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=208;DPB=208;DPRA=0.840708;EPP=26.8965;EPPR=430.79;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.725888;PAO=0;PQA=0;PQR=0;PRO=0;QA=372;QR=6468;RO=197;RPL=0;RPP=26.8965;RPPR=430.79;RPR=11;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=430.79;SRR=197;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:28,3:28:881:3:94:0,-0.561256,-70.8101 0/0:37:37,0:37:1237:0:0:0,-11.1381,-111.629 0/0:24:23,1:23:767:1:35:0,-3.72609,-65.8433 0/1:40:33,7:33:1080:7:243:-10.1676,0,-85.4574 0/0:48:48,0:48:1595:0:0:0,-14.4494,-143.838 0/0:28:28,0:28:908:0:0:0,-8.42884,-82.0194 dDocent_Contig_3425 75 . C A 161811 . AB=0.110865;ABP=1189.39;AC=1;AF=0.0833333;AN=12;AO=345;CIGAR=1X1M1X;DP=5960;DPB=5960;DPRA=1.0077;EPP=752.168;EPPR=354.789;GTI=0;LEN=1;MEANALT=4.2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11990;QR=5643;RO=162;RPL=345;RPP=752.168;RPPR=354.789;RPR=0;RUN=1;SAF=345;SAP=752.168;SAR=0;SRF=162;SRP=354.789;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:902:30,100,771:30:1028:100,771:3445,26254:-2317.22,-2046.42,-2099.77,-196.376,0,-47.7359 0|0:1127:50,79,995:50:1746:79,995:2762,33766:-2880.74,-2671.09,-2789.34,-157.499,-74.8255,0 0|0:850:38,58,752:38:1343:58,752:2045,25677:-2189.22,-2034.15,-2126.07,-116.996,-59.8623,0 0|0:988:30,47,908:30:1070:47,908:1629,30889:-2682.7,-2559.34,-2632.42,-186.103,-140.936,0 0|0:987:10,0,973:10:342:0,973:0,33036:-2941.37,-2944.38,-2972.13,-265.125,-292.902,0 0|0:1106:4,61,1039:4:114:61,1039:2109,35361:-3171.05,-3000.88,-2991.57,-303.721,-141.327,0 dDocent_Contig_3426 20 . T A 848.439 . AB=0.261194;ABP=69.3861;AC=1;AF=0.0833333;AN=12;AO=35;CIGAR=1X;DP=736;DPB=736;DPRA=1.11296;EPP=79.0118;EPPR=1525.21;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9929;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1405;QR=28088;RO=701;RPL=0;RPP=79.0118;RPPR=1525.21;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=701;SRP=1525.21;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:121:121,0:121:4824:0:0:0,-36.4246,-434.059 0/0:108:108,0:108:4308:0:0:0,-32.5112,-387.664 0/0:62:62,0:62:2474:0:0:0,-18.6639,-222.794 0/0:231:231,0:231:9305:0:0:0,-69.5379,-836.831 0/0:80:80,0:80:3230:0:0:0,-24.0824,-290.749 0/1:134:99,35:99:3947:35:1405:-86.3668,0,-314.865 dDocent_Contig_3427 1 . N G 112.807 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=121;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:121:-11.2802,-0.90309,0 dDocent_Contig_3428 48 . G A 2350.9 . AB=0.378049;ABP=34.7879;AC=6;AF=0.5;AN=12;AO=93;CIGAR=1X;DP=246;DPB=246;DPRA=0;EPP=204.957;EPPR=335.246;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.677419;PAIREDR=0.575163;PAO=0;PQA=0;PQR=0;PRO=0;QA=3537;QR=5806;RO=153;RPL=0;RPP=204.957;RPPR=335.246;RPR=93;RUN=1;SAF=93;SAP=204.957;SAR=0;SRF=153;SRP=335.246;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:45:35,10:35:1332:10:377:-20.7354,0,-106.619 0/1:53:37,16:37:1362:16:580:-36.5792,0,-106.918 0/1:31:19,12:19:730:12:465:-32.87,0,-56.6969 0/1:41:28,13:28:1078:13:505:-33.4568,0,-84.9833 0/1:36:11,25:11:420:25:957:-75.6056,0,-27.315 0/1:40:23,17:23:884:17:653:-47.0648,0,-67.8387 dDocent_Contig_3429 98 . N T 207.47 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=7;CIGAR=3X;DP=7;DPB=9.66667;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=9.4572;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=227;QR=0;RO=0;RPL=7;RPP=18.2106;RPPR=0;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:7:0,7:0:0:7:227:-20.747,-2.10721,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_3430 19 . C T 1036.52 . AB=0.530303;ABP=3.53672;AC=2;AF=0.166667;AN=12;AO=35;CIGAR=1X;DP=175;DPB=175;DPRA=1.21101;EPP=79.0118;EPPR=307.016;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.985714;PAO=0;PQA=0;PQR=0;PRO=0;QA=1401;QR=5567;RO=140;RPL=0;RPP=79.0118;RPPR=307.016;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=140;SRP=307.016;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1325:0:0:0,-9.93399,-119.513 0/0:31:31,0:31:1231:0:0:0,-9.33193,-111.063 0/0:19:19,0:19:771:0:0:0,-5.71957,-69.709 0/0:26:26,0:26:1006:0:0:0,-7.82678,-90.8299 0/1:24:11,13:11:430:13:525:-40.3714,0,-31.8212 0/1:42:20,22:20:804:22:876:-66.5027,0,-60.0324 dDocent_Contig_3431 39 . T C 4871.86 . AB=0.348315;ABP=56.37;AC=8;AF=0.666666;AN=12;AO=112;CIGAR=1X2M;DP=286;DPB=286.667;DPRA=0;EPP=246.215;EPPR=250.558;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=1;PQA=37;PQR=0;PRO=0;QA=4481;QR=4504;RO=114;RPL=0;RPP=246.215;RPPR=250.558;RPR=112;RUN=1;SAF=112;SAP=246.215;SAR=0;SRF=114;SRP=250.558;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:28:13,0,15:13:517:0,15:0,607:-46.5383,-50.4517,-93.0154,0,-42.9641,-38.4487 0|1:61:29,1,28:29:1125:1,28:38,1129:-84.3397,-89.9538,-182.057,0,-89.2909,-83.9783 0|1:56:37,8,10:37:1470:8,10:317,399:-21.7224,-6.77074,-125.38,0,-94.9289,-118.009 0|1:59:35,0,24:35:1392:0,24:0,964:-69.2977,-79.8337,-194.44,0,-115.006,-107.781 1|1:19:0,0,19:0:0:0,19:0,738:-66.6188,-66.6188,-66.6188,-5.71957,-5.71957,0 1|1:63:0,47,16:0:0:47,16:1875,644:-207.891,-53.4783,-39.3299,-154.813,0,-149.997 dDocent_Contig_3432 37 . T A 2699 . AB=0.298883;ABP=128.786;AC=2;AF=0.166667;AN=12;AO=109;CIGAR=1X;DP=2418;DPB=2418;DPRA=1.10558;EPP=239.701;EPPR=5014.77;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999567;PAO=0;PQA=0;PQR=0;PRO=0;QA=4310;QR=90987;RO=2308;RPL=0;RPP=239.701;RPPR=5014.77;RPR=109;RUN=1;SAF=109;SAP=239.701;SAR=0;SRF=2308;SRP=5014.77;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:334:334,0:334:13164:0:0:0,-100.544,-1183.85 0/0:419:419,0:419:16490:0:0:0,-126.132,-1482.88 0/0:572:571,1:571:22503:1:41:0,-168.095,-2019.34 0/0:735:733,1:733:28905:1:41:0,-217.266,-2594.91 0/1:215:165,50:165:6511:50:1983:-113.943,0,-521.018 0/1:143:86,57:86:3414:57:2245:-159.179,0,-264.268 dDocent_Contig_3433 98 . N A 94.0081 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=94;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:2:0,2:0:0:2:60:-5.69915,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_3435 1 . N G 366.175 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=11;CIGAR=1X;DP=11;DPB=11;DPRA=0;EPP=12.6832;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0.181818;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=390;QR=0;RO=0;RPL=0;RPP=26.8965;RPPR=0;RPR=11;RUN=1;SAF=2;SAP=12.6832;SAR=9;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:139:-12.8527,-1.20412,0 ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:182:-16.7345,-1.50515,0 dDocent_Contig_3437 7 . C T 192.838 . AB=0.0992248;ABP=902.872;AC=3;AF=0.25;AN=12;AO=72;CIGAR=1X;DP=1152;DPB=1152;DPRA=0.819469;EPP=159.356;EPPR=2343.86;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2716;QR=40978;RO=1078;RPL=0;RPP=159.356;RPPR=2343.86;RPR=72;RUN=1;SAF=72;SAP=159.356;SAR=0;SRF=1078;SRP=2343.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:142:135,7:135:5153:7:260:0,-18.9915,-440.027 0/1:159:142,16:142:5401:16:615:-7.86943,0,-438.274 0/1:218:195,23:195:7411:23:845:-10.7361,0,-601.224 0/1:268:242,25:242:9259:25:957:-5.90014,0,-752.488 0/0:226:226,0:226:8594:0:0:0,-68.0328,-773.232 0/0:139:138,1:138:5160:1:39:0,-37.9466,-460.529 dDocent_Contig_3438 23 . C T 1978.75 . AB=0.276451;ABP=130.193;AC=3;AF=0.25;AN=12;AO=95;CIGAR=1X;DP=580;DPB=580;DPRA=0;EPP=184.065;EPPR=1056.17;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.957895;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3791;QR=19415;RO=485;RPL=0;RPP=209.3;RPPR=1056.17;RPR=95;RUN=1;SAF=92;SAP=184.065;SAR=3;SRF=485;SRP=1056.17;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:98:91,7:91:3641:7:280:0,-3.92988,-302.127 0/0:94:89,5:89:3576:5:203:0,-9.64376,-303.205 0/1:61:55,6:55:2167:6:246:-4.15729,0,-176.836 0/0:95:93,2:93:3723:2:81:0,-20.9121,-327.389 0/1:113:73,40:73:2962:40:1598:-110.036,0,-232.64 0/1:119:84,35:84:3346:35:1383:-88.9026,0,-265.371 dDocent_Contig_3439 31 . T C 129477 . AB=0.777632;ABP=3570.79;AC=6;AF=0.5;AN=12;AO=4144;CIGAR=1X;DP=5329;DPB=5329;DPRA=0;EPP=9001.59;EPPR=2576.21;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999035;PAIREDR=0.995781;PAO=0;PQA=0;PQR=0;PRO=0;QA=161953;QR=46002;RO=1185;RPL=0;RPP=9001.59;RPPR=2576.21;RPR=4144;RUN=1;SAF=4144;SAP=9001.59;SAR=0;SRF=1185;SRP=2576.21;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:786:251,535:251:9781:535:20865:-1639.74,0,-643.159 0/1:954:219,735:219:8520:735:28649:-2288.97,0,-479.218 0/1:845:259,586:259:10160:586:23034:-1816.86,0,-659.43 0/1:811:238,573:238:9131:573:22351:-1765.84,0,-577.217 0/1:946:123,823:123:4757:823:32270:-2616.9,0,-143.323 0/1:987:95,892:95:3653:892:34784:-2830.6,0,-31.7094 dDocent_Contig_3441 73 . G C 65072.8 . AB=0.783201;ABP=1844.21;AC=7;AF=0.583333;AN=12;AO=2577;CIGAR=1X;DP=3191;DPB=3191;DPRA=0;EPP=5598.89;EPPR=1323.27;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=0.999612;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=82482;QR=18865;RO=608;RPL=2577;RPP=5598.89;RPPR=1323.27;RPR=0;RUN=1;SAF=2577;SAP=5598.89;SAR=0;SRF=608;SRP=1323.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:472:67,404:67:2072:404:12755:-1006.1,0,-44.8963 1/1:548:41,507:41:1247:507:16262:-1350.98,-52.4567,0 0/1:547:99,448:99:3056:448:14296:-1121.94,0,-110.614 0/1:516:73,442:73:2301:442:14266:-1128.81,0,-52.2665 0/1:541:129,410:129:3975:410:13158:-1021.77,0,-195.53 0/1:567:199,366:199:6214:366:11745:-886.901,0,-389.259 dDocent_Contig_3442 8 . G A 634.672 . AB=0.126506;ABP=606.418;AC=3;AF=0.25;AN=12;AO=98;CIGAR=1X;DP=1120;DPB=1120;DPRA=0;EPP=215.815;EPPR=2213.57;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.144401;PAO=0;PQA=0;PQR=0;PRO=0;QA=3760;QR=38967;RO=1018;RPL=0;RPP=215.815;RPPR=2213.57;RPR=98;RUN=1;SAF=98;SAP=215.815;SAR=0;SRF=1018;SRP=2213.57;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:193:186,7:186:7128:7:261:0,-34.2539,-617.54 0/0:201:186,15:186:7094:15:585:0,-7.51375,-585.333 0/0:228:212,13:212:8121:13:498:0,-22.9539,-685.516 0/1:182:163,19:163:6259:19:732:-11.4236,0,-508.446 0/1:153:135,17:135:5118:17:653:-13.2335,0,-414.774 0/1:163:136,27:136:5247:27:1031:-44.0319,0,-423.148 dDocent_Contig_3443 79 . T C 37.0972 . AB=0.122807;ABP=73.4498;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=234;DPB=234;DPRA=1.61017;EPP=18.2106;EPPR=495.935;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.428571;PAIREDR=0.625551;PAO=0;PQA=0;PQR=0;PRO=0;QA=245;QR=7236;RO=227;RPL=7;RPP=18.2106;RPPR=495.935;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=227;SRP=495.935;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1137:0:0:0,-10.536,-102.625 0/1:57:50,7:50:1600:7:245:-5.23252,0,-127.118 0/0:47:47,0:47:1570:0:0:0,-14.1484,-141.59 0/0:40:40,0:40:1222:0:0:0,-12.0412,-110.256 0/0:23:23,0:23:743:0:0:0,-6.92369,-67.1738 0/0:32:32,0:32:964:0:0:0,-9.63296,-87.038 dDocent_Contig_3444 16 . T A 912.646 . AB=0.182796;ABP=246.846;AC=5;AF=0.416667;AN=12;AO=56;CIGAR=1X;DP=354;DPB=354;DPRA=0;EPP=124.613;EPPR=650.109;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.660714;PAIREDR=0.765101;PAO=0;PQA=0;PQR=0;PRO=0;QA=2235;QR=11988;RO=298;RPL=0;RPP=124.613;RPPR=650.109;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=298;SRP=650.109;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:36,6:36:1443:6:230:-8.41701,0,-117.471 0/1:81:66,15:66:2641:15:607:-30.5838,0,-213.411 0/0:75:70,5:70:2832:5:205:0,-3.74224,-236.136 0/1:41:35,6:35:1412:6:241:-9.72386,0,-114.983 0/1:57:41,16:41:1644:16:631:-39.9646,0,-131.025 0/1:58:50,8:50:2016:8:321:-11.7973,0,-164.157 dDocent_Contig_3445 54 . A T 212.901 . AB=0.20339;ABP=48.096;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=1X;DP=397;DPB=397;DPRA=0;EPP=57.2971;EPPR=804.284;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.56;PAIREDR=0.517615;PAO=0;PQA=0;PQR=0;PRO=0;QA=941;QR=13616;RO=369;RPL=25;RPP=57.2971;RPPR=804.284;RPR=0;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=369;SRP=804.284;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:88:85,2:85:3107:2:75:0,-19.3011,-272.746 0/0:59:57,2:57:2055:2:75:0,-10.6407,-178.067 0/0:74:70,4:70:2681:4:159:0,-7.5841,-226.75 0/0:69:66,2:66:2422:2:73:0,-13.7137,-211.361 0/1:59:47,12:47:1719:12:447:-22.813,0,-137.206 0/0:48:44,3:44:1632:3:112:0,-4.08801,-136.69 dDocent_Contig_3446 7 . C G 1807.32 . AB=0.169601;ABP=1026.1;AC=1;AF=0.0833333;AN=12;AO=272;CIGAR=1X;DP=5852;DPB=5852;DPRA=1.05579;EPP=593.651;EPPR=12089.4;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999281;PAO=0;PQA=0;PQR=0;PRO=0;QA=8283;QR=210977;RO=5566;RPL=0;RPP=593.651;RPPR=12089.4;RPR=272;RUN=1;SAF=272;SAP=593.651;SAR=0;SRF=5566;SRP=12089.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:932:932,0:932:35327:0:0:0,-280.56,-3177.33 0/0:1071:1070,1:1070:40554:1:10:0,-321.403,-3646.41 0/0:576:574,1:574:21811:1:17:0,-171.627,-1960.06 0/0:1034:1030,1:1030:39130:1:16:0,-308.953,-3517.61 0/0:1160:1069,86:1069:40333:86:2622:0,-111.691,-3391.42 0/1:1079:891,183:891:33822:183:5618:-182.255,0,-2718.56 dDocent_Contig_3447 16 . T A 149869 . AB=0.763089;ABP=3218.23;AC=11;AF=0.916667;AN=12;AO=4081;CIGAR=1X2M;DP=5348;DPB=5380.67;DPRA=0;EPP=8864.79;EPPR=810.798;GTI=0;LEN=1;MEANALT=4;MQM=59.9956;MQMR=60;NS=6;NUMALT=2;ODDS=4.44089e-16;PAIRED=0.999265;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=162922;QR=14874;RO=372;RPL=0;RPP=8864.79;RPPR=810.798;RPR=4081;RUN=1;SAF=4081;SAP=8864.79;SAR=0;SRF=372;SRP=810.798;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:801:88,91,615:88:3532:91,615:3614,24579:-2004.39,-1733.38,-1997.01,-6.47546,0,-112.376 0|1:902:95,68,723:95:3792:68,723:2707,28831:-2345.56,-2151.27,-2443.09,0,-89.4066,-94.655 1|1:741:77,109,553:77:3072:109,553:4369,22138:-1907.38,-1570.61,-1790.79,-106.957,0,-193.476 1|1:884:101,142,638:101:4041:142,638:5666,25484:-2202.18,-1765.97,-2056.09,-133.747,0,-274.565 1|1:1147:0,293,852:0:0:293,852:11621,34050:-3761.17,-2804.6,-2716.4,-956.684,0,-700.206 1|1:873:11,160,700:11:437:160,700:6372,27840:-2777.43,-2256.07,-2243.87,-488.738,0,-313.99 dDocent_Contig_3451 13 . T C 9173.36 . AB=0.253004;ABP=796.801;AC=2;AF=0.166667;AN=12;AO=386;CIGAR=1X;DP=2962;DPB=2962;DPRA=1.13725;EPP=841.199;EPPR=5594.55;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.922718;PAO=0;PQA=0;PQR=0;PRO=0;QA=15522;QR=103069;RO=2575;RPL=0;RPP=841.199;RPPR=5594.55;RPR=386;RUN=1;SAF=386;SAP=841.199;SAR=0;SRF=2575;SRP=5594.55;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:321:320,1:320:12846:1:36:0,-93.0323,-1151.57 0/0:455:450,5:450:18028:5:197:0,-118.864,-1602.91 0/0:245:244,1:244:9790:1:41:0,-69.6578,-876.357 0/0:443:442,0:442:17600:0:0:0,-133.055,-1582.23 0/1:901:661,240:661:26467:240:9651:-596.739,0,-2108.44 0/1:597:458,139:458:18338:139:5597:-323.819,0,-1469.18 dDocent_Contig_3452 52 . C G 3767.26 . AB=0.151907;ABP=1714.31;AC=2;AF=0.166667;AN=12;AO=289;CIGAR=1X;DP=3853;DPB=3853;DPRA=1.03296;EPP=630.566;EPPR=7661.79;GTI=0;LEN=1;MEANALT=2.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11236;QR=139832;RO=3527;RPL=289;RPP=630.566;RPPR=7661.79;RPR=0;RUN=1;SAF=289;SAP=630.566;SAR=0;SRF=3527;SRP=7661.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:592:566,25:566:22499:25:1006:0,-87.4332,-1932.22 0/0:655:637,15:637:25296:15:583:0,-143.85,-2221.68 0/0:355:352,2:352:13968:2:80:0,-99.166,-1248.61 0/0:625:624,0:624:24784:0:0:0,-187.843,-2228.35 0/1:859:738,110:738:29152:110:4302:-131.484,0,-2365.48 0/1:767:610,137:610:24133:137:5265:-248.464,0,-1944.66 dDocent_Contig_3453 1 . N G 635.971 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=20;CIGAR=1X;DP=20;DPB=20;DPRA=0;EPP=46.4397;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=680;QR=0;RO=0;RPL=0;RPP=46.4397;RPPR=0;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:39:-3.89656,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:6:0,6:0:0:6:205:-18.7799,-1.80618,0 1/1:3:0,3:0:0:3:110:-10.2608,-0.90309,0 1/1:7:0,7:0:0:7:238:-21.7508,-2.10721,0 1/1:3:0,3:0:0:3:88:-8.20947,-0.90309,0 dDocent_Contig_3454 128 . T G 908.565 . AB=0.185185;ABP=305.167;AC=3;AF=0.25;AN=12;AO=80;CIGAR=1X;DP=847;DPB=847;DPRA=0.749263;EPP=176.728;EPPR=1666.36;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=58.1384;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.93342;PAO=0;PQA=0;PQR=0;PRO=0;QA=2724;QR=26135;RO=766;RPL=0;RPP=176.728;RPPR=1666.36;RPR=80;RUN=1;SAF=0;SAP=176.728;SAR=80;SRF=0;SRP=1666.36;SRR=766;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:157:142,15:142:4774:15:514:0,-0.67575,-374.921 0/1:136:100,36:100:3437:36:1237:-70.6928,0,-258.575 0/1:101:84,17:84:2837:17:594:-23.3845,0,-212.212 0/1:114:102,12:102:3490:12:379:-0.0974535,0,-267.582 0/0:174:173,0:173:5918:0:0:0,-52.0782,-530.854 0/0:165:165,0:165:5679:0:0:0,-49.6699,-504.513 dDocent_Contig_3455 1 . N G 76.8682 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_3456 70 . C T 80251.9 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=2764;CIGAR=1X;DP=2892;DPB=2892;DPRA=0;EPP=6004.96;EPPR=267.93;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=93251;QR=4064;RO=122;RPL=2764;RPP=6004.96;RPPR=267.93;RPR=0;RUN=1;SAF=2764;SAP=6004.96;SAR=0;SRF=122;SRP=267.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:284:15,269:15:504:269:9069:-770.584,-39.8114,0 1/1:383:28,354:28:881:354:11888:-990.318,-35.5225,0 1/1:131:7,124:7:242:124:4198:-355.907,-17.3172,0 1/1:439:0,438:0:0:438:14896:-1340.43,-131.851,0 1/1:1035:71,963:71:2418:963:32512:-2707.53,-93.4552,0 1/1:620:1,616:1:19:616:20688:-1859.65,-184.045,0 dDocent_Contig_3457 10 . T A 542.94 . AB=0.158371;ABP=227.045;AC=2;AF=0.166667;AN=12;AO=41;CIGAR=1X;DP=813;DPB=813;DPRA=1.36468;EPP=92.0407;EPPR=1679.39;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1588;QR=30353;RO=772;RPL=0;RPP=92.0407;RPPR=1679.39;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=772;SRP=1679.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:99:99,0:99:3869:0:0:0,-29.802,-348.231 0/0:183:182,1:182:7240:1:41:0,-50.9939,-647.181 0/1:54:45,9:45:1778:9:363:-16.7788,0,-143.984 0/0:119:119,0:119:4655:0:0:0,-35.8226,-418.906 0/1:167:141,26:141:5496:26:1008:-40.737,0,-444.244 0/0:191:186,5:186:7315:5:176:0,-41.317,-641.862 dDocent_Contig_3458 8 . A G 46616 . AB=0.697351;ABP=756.386;AC=6;AF=0.5;AN=12;AO=1553;CIGAR=1X;DP=2227;DPB=2227;DPRA=0;EPP=3375.31;EPPR=1466.58;GTI=0;LEN=1;MEANALT=1;MQM=59.9923;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998068;PAIREDR=0.997033;PAO=0;PQA=0;PQR=0;PRO=0;QA=59392;QR=25743;RO=674;RPL=0;RPP=3375.31;RPPR=1466.58;RPR=1553;RUN=1;SAF=1553;SAP=3375.31;SAR=0;SRF=674;SRP=1466.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:279:84,195:84:3210:195:7463:-587.525,0,-205.068 0/1:384:108,276:108:4139:276:10570:-835.312,0,-256.999 0/1:433:155,278:155:5914:278:10594:-822.69,0,-401.867 0/1:313:102,211:102:3906:211:8041:-629.263,0,-257.417 0/1:415:142,273:142:5395:273:10435:-813.851,0,-360.616 0/1:403:83,320:83:3179:320:12289:-984.179,0,-164.948 dDocent_Contig_3459 24 . T C 30059 . AB=0.487327;ABP=5.9274;AC=6;AF=0.5;AN=12;AO=1019;CIGAR=1X;DP=2091;DPB=2091;DPRA=0;EPP=2215.74;EPPR=2326.49;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999065;PAO=0;PQA=0;PQR=0;PRO=0;QA=40536;QR=42858;RO=1070;RPL=0;RPP=2215.74;RPPR=2326.49;RPR=1019;RUN=1;SAF=1019;SAP=2215.74;SAR=0;SRF=1070;SRP=2326.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:255:107,148:107:4285:148:5897:-453.76,0,-308.835 0/1:313:151,162:151:6076:162:6439:-485.008,0,-452.37 0/1:418:195,221:195:7805:221:8801:-665.926,0,-576.394 0/1:294:158,136:158:6330:136:5404:-397.691,0,-480.928 0/1:393:214,179:214:8581:179:7143:-524.203,0,-653.478 0/1:418:245,173:245:9781:173:6852:-490.531,0,-753.829 dDocent_Contig_3460 90 . C G 48752.4 . AB=0.811268;ABP=600.514;AC=10;AF=0.833333;AN=12;AO=1709;CIGAR=1X;DP=1887;DPB=1887;DPRA=0;EPP=3714.06;EPPR=389.532;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=58103;QR=6122;RO=178;RPL=1709;RPP=3714.06;RPPR=389.532;RPR=0;RUN=1;SAF=1709;SAP=3714.06;SAR=0;SRF=178;SRP=389.532;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:367:77,290:77:2654:290:9719:-764.263,0,-128.639 1/1:441:19,422:19:654:422:14373:-1234.27,-73.5717,0 1/1:312:25,287:25:864:287:9810:-804.849,-15.8448,0 0/1:343:57,286:57:1950:286:9710:-770.678,0,-72.5236 1/1:196:0,196:0:0:196:6701:-603.215,-59.0019,0 1/1:228:0,228:0:0:228:7790:-701.188,-68.6348,0 dDocent_Contig_3461 149 . T A 33.3821 . AB=0.176471;ABP=18.4661;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=151;DPB=151;DPRA=0.634328;EPP=9.52472;EPPR=324.388;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.709459;PAO=0;PQA=0;PQR=0;PRO=0;QA=107;QR=5563;RO=148;RPL=3;RPP=9.52472;RPPR=324.388;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=324.388;SRR=148;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:922:0:0:0,-7.22472,-83.2953 0/0:37:37,0:37:1398:0:0:0,-11.1381,-126.088 0/1:17:14,3:14:532:3:107:-4.86089,0,-43.1046 0/0:23:23,0:23:840:0:0:0,-6.92369,-75.9108 0/0:19:19,0:19:700:0:0:0,-5.71957,-63.3195 0/0:31:31,0:31:1171:0:0:0,-9.33193,-105.689 dDocent_Contig_3462 98 . N A 1862.74 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=72;CIGAR=1X;DP=74;DPB=74;DPRA=0;EPP=159.356;EPPR=0;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2049;QR=0;RO=0;RPL=72;RPP=159.356;RPPR=0;RPR=0;RUN=1;SAF=72;SAP=159.356;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:6:0,6:0:0:6:167:-15.3029,-1.80618,0 1/1:6:0,6:0:0:6:146:-13.3795,-1.80618,0 1/1:13:0,13:0:0:13:357:-32.395,-3.91339,0 1/1:24:0,23:0:0:23:714:-64.4683,-6.92369,0 1/1:25:0,24:0:0:24:665:-60.0291,-7.22472,0 dDocent_Contig_3463 1 . N G 992.727 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=31;CIGAR=1X;DP=31;DPB=31;DPRA=0;EPP=70.3259;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1071;QR=0;RO=0;RPL=0;RPP=70.3259;RPPR=0;RPR=31;RUN=1;SAF=0;SAP=70.3259;SAR=31;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:8:0,8:0:0:8:278:-25.358,-2.40824,0 1/1:6:0,6:0:0:6:206:-18.8766,-1.80618,0 1/1:5:0,5:0:0:5:175:-16.0937,-1.50515,0 1/1:6:0,6:0:0:6:207:-18.9682,-1.80618,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:4:0,4:0:0:4:135:-12.4835,-1.20412,0 dDocent_Contig_3464 69 . T C 907.328 . AB=0.148235;ABP=459.791;AC=5;AF=0.416667;AN=12;AO=67;CIGAR=1X;DP=508;DPB=508;DPRA=0;EPP=148.499;EPPR=732.866;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.75737;PAO=0;PQA=0;PQR=0;PRO=0;QA=2665;QR=16975;RO=441;RPL=67;RPP=148.499;RPPR=960.63;RPR=0;RUN=1;SAF=0;SAP=148.499;SAR=67;SRF=413;SRP=732.866;SRR=28;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:59:53,6:53:2041:6:227:-3.0226,0,-166.13 0/1:98:89,9:89:3392:9:359:-3.17127,0,-275.868 0/0:83:79,4:79:3021:4:152:0,-10.9381,-257.96 0/1:92:79,13:79:3104:13:506:-18.1878,0,-251.765 0/1:109:91,18:91:3436:18:728:-33.0326,0,-276.518 0/1:67:50,17:50:1981:17:693:-42.5288,0,-158.326 dDocent_Contig_3465 70 . G A 1616.72 . AB=0.152371;ABP=1043.22;AC=4;AF=0.333333;AN=12;AO=181;CIGAR=1X;DP=1735;DPB=1735;DPRA=0;EPP=396.047;EPPR=3377.48;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.996139;PAO=0;PQA=0;PQR=0;PRO=0;QA=6202;QR=53307;RO=1554;RPL=181;RPP=396.047;RPPR=3377.48;RPR=0;RUN=1;SAF=181;SAP=396.047;SAR=0;SRF=1554;SRP=3377.48;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:277:231,46:231:7811:46:1575:-58.6555,0,-619.697 0/0:346:329,17:329:11080:17:579:0,-51.7236,-944.748 0/1:145:127,18:127:4365:18:634:-13.7385,0,-349.389 0/1:283:232,51:232:8103:51:1745:-72.1377,0,-644.128 0/0:398:385,13:385:13356:13:445:0,-79.4343,-1161.52 0/1:286:250,36:250:8592:36:1224:-24.3617,0,-687.22 dDocent_Contig_3466 25 . T C 7038.2 . AB=0.677812;ABP=93.3607;AC=7;AF=0.583333;AN=12;AO=223;CIGAR=1X2M;DP=329;DPB=329;DPRA=0;EPP=487.249;EPPR=202.786;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.865471;PAIREDR=0.771739;PAO=0;PQA=0;PQR=0;PRO=0;QA=8793;QR=3587;RO=92;RPL=0;RPP=487.249;RPPR=202.786;RPR=223;RUN=1;SAF=223;SAP=487.249;SAR=0;SRF=92;SRP=202.786;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:50:17,0,33:17:661:0,33:0,1305:-102.657,-107.774,-162.087,0,-54.7036,-44.7696 0|1:95:20,0,75:20:781:0,75:0,3013:-242.654,-248.675,-312.876,0,-64.5939,-42.0167 0|1:29:11,0,18:11:430:0,18:0,700:-54.5875,-57.8989,-93.2516,0,-35.7425,-30.324 0|1:53:15,0,38:15:591:0,38:0,1496:-118.933,-123.448,-172.07,0,-49.0155,-37.5763 1|1:49:6,11,32:6:227:11,32:442,1244:-118.235,-83.6146,-98.9101,-17.8377,0,-26.805 0|1:53:23,3,27:23:897:3,27:123,1035:-77.976,-74.7448,-147.573,0,-63.5562,-65.5829 dDocent_Contig_3467 20 . T G 8042.31 . AB=0.781155;ABP=228.903;AC=6;AF=0.5;AN=12;AO=257;CIGAR=1X;DP=329;DPB=329;DPRA=0;EPP=561.079;EPPR=159.356;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10146;QR=2846;RO=72;RPL=0;RPP=561.079;RPPR=159.356;RPR=257;RUN=1;SAF=257;SAP=561.079;SAR=0;SRF=72;SRP=159.356;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:57:13,44:13:500:44:1758:-141.283,0,-28.1789 0/1:65:13,52:13:515:52:2053:-165.392,0,-27.1286 0/1:44:9,35:9:347:35:1370:-110.309,0,-18.3366 0/1:64:10,54:10:398:54:2110:-170.82,0,-16.9111 0/1:52:19,33:19:761:33:1303:-101.879,0,-53.1576 0/1:47:8,39:8:325:39:1552:-125.771,0,-15.4712 dDocent_Contig_3468 86 . T C 1282.19 . AB=0.218487;ABP=248.752;AC=5;AF=0.416667;AN=12;AO=79;CIGAR=1X;DP=413;DPB=413;DPRA=0;EPP=174.557;EPPR=728.282;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.967066;PAO=0;PQA=0;PQR=0;PRO=0;QA=2736;QR=11544;RO=334;RPL=79;RPP=174.557;RPPR=728.282;RPR=0;RUN=1;SAF=79;SAP=174.557;SAR=0;SRF=334;SRP=728.282;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:77:58,19:58:1994:19:663:-36.8165,0,-156.556 0/1:89:66,23:66:2285:23:798:-45.3481,0,-179.128 0/1:53:42,11:42:1471:11:371:-17.7614,0,-116.733 0/1:62:53,9:53:1835:9:315:-10.0249,0,-146.771 0/1:76:60,16:60:2050:16:556:-27.4903,0,-161.897 0/0:56:55,1:55:1909:1:33:0,-13.5585,-168.793 dDocent_Contig_3469 8 . G A 1039.68 . AB=0.131215;ABP=858.271;AC=4;AF=0.333333;AN=12;AO=96;CIGAR=1X;DP=1103;DPB=1103;DPRA=1.48397;EPP=211.472;EPPR=2189.68;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9662;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993049;PAO=0;PQA=0;PQR=0;PRO=0;QA=3682;QR=38455;RO=1007;RPL=0;RPP=211.472;RPPR=2189.68;RPR=96;RUN=1;SAF=96;SAP=211.472;SAR=0;SRF=1007;SRP=2189.68;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:52:39,13:39:1499:13:494:-29.1505,0,-119.452 0/1:261:229,32:229:8753:32:1226:-32.0645,0,-708.952 0/1:187:162,25:162:6226:25:961:-30.5116,0,-503.978 0/1:224:199,25:199:7610:25:962:-19.4631,0,-617.294 0/0:131:131,0:131:4987:0:0:0,-39.4349,-448.859 0/0:248:247,1:247:9380:1:39:0,-70.7589,-840.018 dDocent_Contig_3470 122 . N G 47.2129 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=7;CIGAR=1I1M8X5I1X;DP=10;DPB=14.7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=2.5;MQM=7;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=258;QR=0;RO=0;RPL=7;RPP=18.2106;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:4:0,2:0:0:2:74:-1.25937,-0.60206,0 .:.:.:.:.:.:.:. 1|1:6:0,5:0:0:5:184:-3.14835,-1.50515,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_3471 98 . N C 756.756 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=34;CIGAR=1X;DP=36;DPB=36;DPRA=0;EPP=76.8404;EPPR=0;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=818;QR=0;RO=0;RPL=34;RPP=76.8404;RPPR=0;RPR=0;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:6:0,6:0:0:6:150:-13.7483,-1.80618,0 1/1:7:0,7:0:0:7:163:-14.901,-2.10721,0 1/1:3:0,3:0:0:3:69:-6.43868,-0.90309,0 1/1:6:0,5:0:0:5:139:-12.6649,-1.50515,0 1/1:4:0,3:0:0:3:72:-6.6063,-0.90309,0 1/1:10:0,10:0:0:10:225:-20.4711,-3.0103,0 dDocent_Contig_3472 107 . N G 278.322 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=12;CIGAR=1X;DP=12;DPB=12;DPRA=0;EPP=29.068;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=285;QR=0;RO=0;RPL=0;RPP=29.068;RPPR=0;RPR=12;RUN=1;SAF=0;SAP=29.068;SAR=12;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:4:0,4:0:0:4:90:-8.32413,-1.20412,0 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 1/1:3:0,3:0:0:3:76:-7.09167,-0.90309,0 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_3473 12 . T A 8665.63 . AB=0.621145;ABP=60.8843;AC=6;AF=0.5;AN=12;AO=282;CIGAR=1X;DP=454;DPB=454;DPRA=0;EPP=615.366;EPPR=376.504;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.366279;PAO=0;PQA=0;PQR=0;PRO=0;QA=11258;QR=6848;RO=172;RPL=0;RPP=615.366;RPPR=376.504;RPR=282;RUN=1;SAF=282;SAP=615.366;SAR=0;SRF=172;SRP=376.504;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:62:29,33:29:1125:33:1321:-100.487,0,-82.8616 0/1:96:36,60:36:1426:60:2392:-186.535,0,-99.692 0/1:65:18,47:18:720:47:1855:-147.597,0,-45.5575 0/1:82:38,44:38:1530:44:1756:-133.571,0,-113.256 0/1:57:15,42:15:603:42:1676:-133.907,0,-37.4496 0/1:92:36,56:36:1444:56:2258:-175.687,0,-102.516 dDocent_Contig_3474 98 . N C 343.674 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=20;CIGAR=1X;DP=21;DPB=21;DPRA=0;EPP=46.4397;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=362;QR=0;RO=0;RPL=20;RPP=46.4397;RPPR=0;RPR=0;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:5:0,5:0:0:5:86:-7.91175,-1.50515,0 1/1:5:0,5:0:0:5:42:-3.86396,-1.50515,0 1/1:2:0,2:0:0:2:37:-3.51435,-0.60206,0 1/1:3:0,2:0:0:2:42:-3.83321,-0.60206,0 1/1:3:0,3:0:0:3:71:-6.62632,-0.90309,0 1/1:3:0,3:0:0:3:84:-7.83907,-0.90309,0 dDocent_Contig_3475 14 . A G 637.411 . AB=0.204969;ABP=124.734;AC=3;AF=0.25;AN=12;AO=41;CIGAR=1X;DP=358;DPB=358;DPRA=3.66279;EPP=92.0407;EPPR=691.367;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1572;QR=12578;RO=317;RPL=0;RPP=92.0407;RPPR=691.367;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=317;SRP=691.367;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:20,6:20:790:6:241:-14.2397,0,-63.5886 0/1:100:81,19:81:3203:19:731:-36.0017,0,-258.251 0/1:35:27,8:27:1079:8:321:-18.7216,0,-86.8614 0/0:154:146,8:146:5795:8:279:0,-20.9216,-495.922 0/0:23:23,0:23:901:0:0:0,-6.92369,-81.3967 0/0:20:20,0:20:810:0:0:0,-6.0206,-73.2148 dDocent_Contig_3476 77 . G T 120.608 . AB=0.159574;ABP=97.6311;AC=3;AF=0.25;AN=12;AO=16;CIGAR=1X;DP=339;DPB=339;DPRA=0.546296;EPP=37.7539;EPPR=704.396;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.98452;PAO=0;PQA=0;PQR=0;PRO=0;QA=532;QR=11273;RO=323;RPL=16;RPP=37.7539;RPPR=704.396;RPR=0;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=323;SRP=704.396;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:29,4:29:1004:4:138:-2.82605,0,-80.7343 0/0:52:52,0:52:1843:0:0:0,-15.6536,-166.151 0/1:12:9,3:9:326:3:72:-3.10554,0,-26.0744 0/1:49:41,8:41:1409:8:286:-11.3349,0,-112.351 0/0:83:82,1:82:2870:1:36:0,-21.3872,-254.942 0/0:110:110,0:110:3821:0:0:0,-33.1133,-344.089 dDocent_Contig_3477 8 . G T 144.674 . AB=0.115854;ABP=213.219;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1X;DP=434;DPB=434;DPRA=1.30833;EPP=52.9542;EPPR=895.485;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.869565;PAIREDR=0.895377;PAO=0;PQA=0;PQR=0;PRO=0;QA=872;QR=15754;RO=411;RPL=0;RPP=52.9542;RPPR=895.485;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=411;SRP=895.485;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:56:51,5:51:1954:5:195:-1.06652,0,-159.247 0/1:108:94,14:94:3601:14:535:-15.982,0,-291.698 0/0:74:72,2:72:2759:2:78:0,-14.8727,-241.091 0/0:76:74,2:74:2807:2:64:0,-16.8017,-246.733 0/0:52:52,0:52:2008:0:0:0,-15.6536,-180.956 0/0:68:68,0:68:2625:0:0:0,-20.47,-236.44 dDocent_Contig_3478 107 . N A 156.783 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0.333333;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=151;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:28:-2.79973,-0.30103,0 1/1:1:0,1:0:0:1:30:-2.99957,-0.30103,0 1/1:1:0,1:0:0:1:20:-1.99996,-0.30103,0 1/1:2:0,2:0:0:2:40:-3.79918,-0.60206,0 dDocent_Contig_3479 30 . T C 204.26 . AB=0.0995146;ABP=576.975;AC=2;AF=0.166667;AN=12;AO=43;CIGAR=1X;DP=1308;DPB=1308;DPRA=1.35676;EPP=96.3836;EPPR=2745.58;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999208;PAO=0;PQA=0;PQR=0;PRO=0;QA=1684;QR=49715;RO=1263;RPL=0;RPP=96.3836;RPPR=2745.58;RPR=43;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=1263;SRP=2745.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:186:186,0:186:7258:0:0:0,-55.9916,-652.914 0/0:151:150,0:150:5856:0:0:0,-45.1545,-526.467 0/0:341:338,2:338:13484:2:50:0,-97.7486,-1207.85 0/0:218:218,0:218:8547:0:0:0,-65.6245,-768.812 0/1:217:194,23:194:7635:23:939:-19.4858,0,-621.467 0/1:195:177,18:177:6935:18:695:-4.16155,0,-565.169 dDocent_Contig_3480 68 . C T 76.1966 . AB=0.135593;ABP=71.062;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=378;DPB=378;DPRA=0.924765;EPP=20.3821;EPPR=806.455;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.978378;PAO=0;PQA=0;PQR=0;PRO=0;QA=295;QR=13403;RO=370;RPL=8;RPP=20.3821;RPPR=806.455;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=370;SRP=806.455;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:61:61,0:61:2210:0:0:0,-18.3628,-199.155 0/0:52:52,0:52:1878:0:0:0,-15.6536,-169.291 0/0:44:44,0:44:1634:0:0:0,-13.2453,-147.321 0/0:86:86,0:86:3120:0:0:0,-25.8886,-281.013 0/0:76:76,0:76:2708:0:0:0,-22.8783,-243.952 0/1:59:51,8:51:1853:8:295:-9.14254,0,-149.28 dDocent_Contig_3481 41 . C T 1400.59 . AB=0.111111;ABP=1977.36;AC=2;AF=0.166667;AN=12;AO=167;CIGAR=1X;DP=3168;DPB=3168;DPRA=1.80541;EPP=365.646;EPPR=6502.24;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6618;QR=120685;RO=3001;RPL=0;RPP=365.646;RPPR=6502.24;RPR=167;RUN=1;SAF=167;SAP=365.646;SAR=0;SRF=3001;SRP=6519.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:375:375,0:375:15055:0:0:0,-112.886,-1353.74 0/0:451:451,0:451:18102:0:0:0,-135.765,-1627.63 0/0:316:316,0:316:12736:0:0:0,-95.1255,-1145.25 0/0:523:523,0:523:20998:0:0:0,-157.439,-1887.95 0/1:872:774,98:774:31158:98:3858:-84.7245,0,-2538.75 0/1:631:562,69:562:22636:69:2760:-58.5559,0,-1845.23 dDocent_Contig_3482 20 . G T 2750.19 . AB=0.150538;ABP=298.961;AC=2;AF=0.166667;AN=12;AO=42;CIGAR=1X3M2X;DP=279;DPB=279;DPRA=0;EPP=94.2121;EPPR=324.388;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=0.333333;PAIREDR=0.594595;PAO=0;PQA=0;PQR=0;PRO=0;QA=1647;QR=5846;RO=148;RPL=0;RPP=94.2121;RPPR=324.388;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=148;SRP=324.388;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:39:23,7,8:23:903:7,8:277,321:-19.5272,-3.65637,-75.8077,0,-51.4638,-71.8535 0|0:62:20,9,33:20:796:9,33:360,1337:-104.233,-80.5992,-143.425,0,-35.88,-55.602 0|0:40:21,4,14:21:826:4,14:146,562:-40.0042,-34.4079,-101.14,0,-56.0356,-63.7423 0|0:63:28,6,29:28:1110:6,29:231,1161:-87.2236,-76.6911,-166.247,0,-72.4112,-82.6432 0|1:38:29,7,1:29:1145:7,1:280,41:-14.3584,0,-92.1248,-19.7021,-90.8474,-113.613 0|1:37:27,9,1:27:1066:9,1:353,40:-20.8945,0,-85.0003,-25.7264,-84.4143,-113.142 dDocent_Contig_3483 8 . C G 299.359 . AB=0.157143;ABP=145.955;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1X;DP=416;DPB=416;DPRA=1.26087;EPP=52.9542;EPPR=856.399;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.826087;PAIREDR=0.829517;PAO=0;PQA=0;PQR=0;PRO=0;QA=868;QR=15046;RO=393;RPL=0;RPP=52.9542;RPPR=856.399;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=393;SRP=856.399;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:66:57,9:57:2177:9:330:-10.176,0,-176.286 0/1:74:61,13:61:2347:13:499:-22.9817,0,-189.163 0/0:92:91,1:91:3494:1:39:0,-23.7982,-310.688 0/0:70:70,0:70:2691:0:0:0,-21.0721,-242.376 0/0:53:53,0:53:2032:0:0:0,-15.9546,-183.112 0/0:61:61,0:61:2305:0:0:0,-18.3628,-207.664 dDocent_Contig_3484 81 . T C 377.975 . AB=0.15311;ABP=221.456;AC=2;AF=0.166667;AN=12;AO=45;CIGAR=1X;DP=1055;DPB=1055;DPRA=0.535662;EPP=100.727;EPPR=2194.03;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999009;PAO=0;PQA=0;PQR=0;PRO=0;QA=1585;QR=35449;RO=1009;RPL=45;RPP=100.727;RPPR=2194.03;RPR=0;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=1009;SRP=2194.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:145:119,26:119:4157:26:915:-39.0174,0,-330.67 0/0:159:145,13:145:5084:13:455:0,-6.63898,-416.43 0/1:64:58,6:58:2045:6:215:-0.433251,0,-165.055 0/0:183:183,0:183:6412:0:0:0,-55.0885,-577.179 0/0:249:249,0:249:8782:0:0:0,-74.9565,-790.385 0/0:255:255,0:255:8969:0:0:0,-76.7626,-807.211 dDocent_Contig_3485 22 . C T 24502.5 . AB=0.263287;ABP=1394.97;AC=6;AF=0.5;AN=12;AO=753;CIGAR=1M1X4M;DP=2860;DPB=2860;DPRA=0;EPP=1638.13;EPPR=2250.48;GTI=0;LEN=1;MEANALT=7.66667;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=0.191235;PAIREDR=0.849275;PAO=0;PQA=0;PQR=0;PRO=0;QA=29822;QR=40067;RO=1035;RPL=0;RPP=1638.13;RPPR=2250.48;RPR=753;RUN=1;SAF=753;SAP=1638.13;SAR=0;SRF=1035;SRP=2250.48;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:337:169,0,24,58,80,0:169:6535:0,24,58,80,0:0,867,2066,3181,0:-211.032,-261.906,-798.643,-191.157,-727.892,-720.668,-93.5342,-630.265,-559.515,-612.805,0,-536.75,-465.999,-368.372,-512.667,-261.906,-798.643,-727.892,-630.265,-536.75,-798.643 0|1:552:193,0,22,164,162,0:193:7523:0,22,164,162,0:0,823,5867,6386,0:-467.245,-525.344,-1143.68,-457.952,-1076.29,-1069.67,-46.999,-665.331,-597.94,-615.962,0,-618.347,-550.955,-139.999,-569.58,-525.344,-1143.68,-1076.29,-665.331,-618.347,-1143.68 0|1:556:282,0,28,148,92,0:282:10857:0,28,148,92,0:0,1042,5237,3672,0:-341.613,-426.503,-1317.87,-341.222,-1232.59,-1224.16,0,-891.358,-806.078,-846.806,-124.079,-1015.46,-930.175,-588.945,-987.762,-426.503,-1317.87,-1232.59,-891.358,-1015.46,-1317.87 0|1:420:195,0,29,69,117,1:195:7535:0,29,69,117,1:0,1068,2500,4652,38:-324.305,-383.006,-1001.84,-295.685,-914.52,-905.791,-178.917,-797.749,-710.429,-776.978,0,-618.849,-531.527,-414.757,-583.628,-379.889,-998.725,-911.404,-794.633,-615.732,-998.424 1|0:567:94,0,0,128,207,133:94:3649:0,0,128,207,133:0,0,4609,8226,5106:-768.114,-796.41,-1096.22,-796.41,-1096.22,-1096.22,-420.383,-720.193,-720.193,-681.662,-119.219,-419.035,-419.035,-43.0076,-356.722,-377.38,-677.192,-677.192,-301.166,0,-637.155 0|1:428:102,32,0,129,95,65:102:3968:32,0,129,95,65:1251,0,4655,3705,2461:-349.162,-277.014,-593.46,-379.867,-603.093,-705.945,0,-223.225,-326.077,-287.244,-75.3729,-298.602,-401.454,-21.5873,-372.856,-178.158,-401.385,-504.237,-124.371,-199.746,-484.67 dDocent_Contig_3486 24 . C T 33013.1 . AB=0.781293;ABP=502.661;AC=8;AF=0.666666;AN=12;AO=941;CIGAR=1X1M;DP=1119;DPB=1119;DPRA=0;EPP=2046.37;EPPR=259.244;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=37640;QR=4725;RO=118;RPL=0;RPP=2046.37;RPPR=259.244;RPR=941;RUN=1;SAF=941;SAP=2046.37;SAR=0;SRF=118;SRP=259.244;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:56:22,0,34:22:856:0,34:0,1341:-104.092,-110.715,-181.049,0,-70.725,-60.49 0|1:148:56,0,92:56:2260:0,92:0,3715:-289.799,-306.657,-492.95,0,-186.697,-159.002 0|1:110:16,0,94:16:645:0,94:0,3767:-305.906,-310.722,-363.888,0,-53.5676,-25.2708 0|1:121:24,1,96:24:964:1,96:26,3864:-311.362,-316.55,-395.684,0,-77.5377,-50.672 1|1:392:0,19,373:0:0:19,373:765,14909:-1340.23,-1277.18,-1271.46,-112.284,-48.8328,0 1|1:292:0,40,252:0:0:40,252:1599,10044:-959.146,-827.445,-815.404,-132.099,0,-56.2398 dDocent_Contig_3487 85 . T A 137.112 . AB=0.140625;ABP=146.599;AC=2;AF=0.166667;AN=12;AO=25;CIGAR=1X;DP=377;DPB=377;DPRA=0.805333;EPP=57.2971;EPPR=767.369;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.88;PAIREDR=0.789773;PAO=0;PQA=0;PQR=0;PRO=0;QA=862;QR=12135;RO=352;RPL=11;RPP=3.79203;RPPR=3.40511;RPR=14;RUN=1;SAF=11;SAP=3.79203;SAR=14;SRF=172;SRP=3.40511;SRR=180;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:63:55,8:55:1914:8:262:-4.93546,0,-153.578 0/0:57:56,1:56:1924:1:35:0,-13.6601,-169.941 0/0:51:49,2:49:1683:2:74:0,-8.3271,-144.73 0/1:65:55,10:55:1903:10:347:-11.9975,0,-151.985 0/0:75:75,0:75:2570:0:0:0,-22.5772,-231.558 0/0:66:62,4:62:2141:4:144:0,-6.55453,-179.65 dDocent_Contig_3488 57 . A G 3051.08 . AB=0.411765;ABP=22.5536;AC=4;AF=0.333333;AN=12;AO=120;CIGAR=1X;DP=388;DPB=388;DPRA=1.84211;EPP=263.587;EPPR=584.965;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.65;PAIREDR=0.626866;PAO=0;PQA=0;PQR=0;PRO=0;QA=4459;QR=9719;RO=268;RPL=62;RPP=3.29983;RPPR=3.82055;RPR=58;RUN=1;SAF=62;SAP=3.29983;SAR=58;SRF=139;SRP=3.82055;SRR=129;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:48:36,12:36:1338:12:424:-24.0415,0,-106.245 0/1:91:35,56:35:1259:56:2105:-162.275,0,-86.19 0/1:51:31,20:31:1114:20:760:-53.3661,0,-85.1813 0/1:99:68,31:68:2451:31:1135:-72.647,0,-190.998 0/0:38:38,0:38:1370:0:0:0,-11.4391,-123.579 0/0:61:60,1:60:2187:1:35:0,-14.8642,-193.546 dDocent_Contig_3489 27 . C G 763.209 . AB=0.105516;ABP=566.661;AC=2;AF=0.166667;AN=12;AO=44;CIGAR=10M1X2M;DP=796;DPB=759.538;DPRA=0.550132;EPP=98.5551;EPPR=1531.73;GTI=0;LEN=1;MEANALT=2.25;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1743;QR=27647;RO=704;RPL=0;RPP=98.5551;RPPR=1531.73;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=704;SRP=1531.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:73:50,5,18:50:1966:5,18:169,714:-43.7679,-45.1339,-205.339,0,-148.069,-156.344 0|0:101:80,13,8:80:3150:13,8:494,313:-16.4236,0,-255.229,-14.7688,-233.41,-271.513 0|1:99:76,11,12:76:2979:11,12:417,478:-16.4893,-5.1885,-246.837,0,-210.79,-241.364 0|0:144:123,14,6:123:4856:14,6:535,238:-6.86192,0,-395.357,-24.2961,-379.983,-422.073 0|0:199:198,0,0:198:7804:0,0:0,0:0,-59.6039,-701.654,-59.6039,-701.654,-701.654 0|0:180:177,0,0:177:6892:0,0:0,0:0,-53.2823,-619.759,-53.2823,-619.759,-619.759 dDocent_Contig_3491 1 . N G 76.8682 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_3492 182 . N G 584.486 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=16;CIGAR=1X;DP=16;DPB=16;DPRA=0;EPP=37.7539;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=620;QR=0;RO=0;RPL=16;RPP=37.7539;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=37.7539;SAR=16;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:73:-6.92919,-0.60206,0 1/1:6:0,6:0:0:6:236:-21.6124,-1.80618,0 ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:198:-18.1969,-1.50515,0 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 1/1:2:0,2:0:0:2:72:-6.83664,-0.60206,0 dDocent_Contig_3493 18 . G A 26189.6 . AB=0.365414;ABP=413.329;AC=6;AF=0.5;AN=12;AO=953;CIGAR=1X;DP=2608;DPB=2608;DPRA=0;EPP=2072.42;EPPR=3592.45;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=59.9958;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.999395;PAO=0;PQA=0;PQR=0;PRO=0;QA=37961;QR=65710;RO=1653;RPL=0;RPP=2072.42;RPPR=3592.45;RPR=953;RUN=1;SAF=953;SAP=2072.42;SAR=0;SRF=1653;SRP=3592.45;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:391:268,123:268:10588:123:4881:-321.48,0,-834.555 0/1:655:410,243:410:16364:243:9594:-666.038,0,-1274.6 0/1:247:136,111:136:5447:111:4455:-326.518,0,-415.707 0/1:491:301,190:301:11946:190:7636:-539.026,0,-926.496 0/1:374:195,179:195:7782:179:7114:-527.343,0,-587.393 0/1:450:343,107:343:13583:107:4281:-249.778,0,-1086.03 dDocent_Contig_3495 78 . C T 1289.4 . AB=0.261905;ABP=147.775;AC=4;AF=0.333333;AN=12;AO=85;CIGAR=1X;DP=425;DPB=425;DPRA=0;EPP=187.585;EPPR=739.139;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.941176;PAIREDR=0.864307;PAO=0;PQA=0;PQR=0;PRO=0;QA=2750;QR=11562;RO=339;RPL=85;RPP=187.585;RPPR=739.139;RPR=0;RUN=1;SAF=85;SAP=187.585;SAR=0;SRF=339;SRP=739.139;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:56:43,13:43:1473:13:378:-17.4432,0,-116.007 0/1:89:69,19:69:2342:19:632:-30.3911,0,-184.247 0/0:53:51,2:51:1758:2:70:0,-9.30719,-151.86 0/0:78:72,6:72:2479:6:197:0,-5.42752,-205.32 0/1:82:57,25:57:1932:25:823:-49.6905,0,-149.473 0/1:67:47,20:47:1578:20:650:-38.6369,0,-122.137 dDocent_Contig_3496 72 . A G 6811.66 . AB=0.372294;ABP=101.178;AC=2;AF=0.166667;AN=12;AO=259;CIGAR=1X;DP=1614;DPB=1614;DPRA=1.46037;EPP=565.422;EPPR=2945.36;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997786;PAO=0;PQA=0;PQR=0;PRO=0;QA=9949;QR=50621;RO=1355;RPL=259;RPP=565.422;RPPR=2945.36;RPR=0;RUN=1;SAF=259;SAP=565.422;SAR=0;SRF=1355;SRP=2945.36;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:226:226,0:226:8503:0:0:0,-68.0328,-765.041 0/0:265:264,1:264:9826:1:26:0,-77.1731,-881.44 0/0:171:171,0:171:6371:0:0:0,-51.4761,-573.345 0/0:259:259,0:259:9734:0:0:0,-77.9668,-875.752 0/1:222:160,62:160:5980:62:2393:-148.726,0,-471.335 0/1:471:275,196:275:10207:196:7530:-535.661,0,-776.523 dDocent_Contig_3497 1 . N G 77.8076 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_3498 7 . C G 1786.18 . AB=0.222222;ABP=364.922;AC=6;AF=0.5;AN=12;AO=120;CIGAR=1X;DP=540;DPB=540;DPRA=0;EPP=254.973;EPPR=904.171;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.975;PAIREDR=0.990361;PAO=0;PQA=0;PQR=0;PRO=0;QA=3886;QR=15888;RO=415;RPL=0;RPP=263.587;RPPR=904.171;RPR=120;RUN=1;SAF=119;SAP=254.973;SAR=1;SRF=415;SRP=904.171;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:109:86,22:86:3268:22:696:-30.2911,0,-261.644 0/1:108:70,37:70:2686:37:1194:-75.3208,0,-209.523 0/1:55:38,15:38:1476:15:476:-27.0074,0,-116.995 0/1:66:54,12:54:2074:12:365:-13.271,0,-167.025 0/1:88:74,14:74:2853:14:475:-16.5746,0,-230.451 0/1:114:93,20:93:3531:20:680:-27.3746,0,-283.793 dDocent_Contig_3499 35 . T A 175050 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=5083;CIGAR=1X;DP=5168;DPB=5168;DPRA=0;EPP=11040.6;EPPR=181.071;GTI=0;LEN=1;MEANALT=1.5;MQM=59.9919;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998426;PAIREDR=0.97561;PAO=0;PQA=0;PQR=0;PRO=0;QA=197940;QR=3255;RO=82;RPL=0;RPP=11040.6;RPPR=181.071;RPR=5083;RUN=1;SAF=5083;SAP=11040.6;SAR=0;SRF=82;SRP=181.071;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:930:26,904:26:1011:904:35173:-3071.52,-188.683,0 1/1:1028:14,1013:14:561:1013:39415:-3493.39,-258.435,0 1/1:723:0,722:0:0:722:28132:-2529.35,-217.344,0 1/1:1021:20,1001:20:798:1001:38969:-3431.99,-235.211,0 1/1:680:6,674:6:240:674:26163:-2330.78,-182.725,0 1/1:786:16,769:16:645:769:30088:-2647.21,-178.324,0 dDocent_Contig_3500 56 . C A 941.36 . AB=0.172414;ABP=300.352;AC=4;AF=0.333333;AN=12;AO=55;CIGAR=1X;DP=463;DPB=463;DPRA=1.10764;EPP=122.441;EPPR=886.8;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.981818;PAIREDR=0.965602;PAO=0;PQA=0;PQR=0;PRO=0;QA=2178;QR=16141;RO=407;RPL=55;RPP=122.441;RPPR=886.8;RPR=0;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=407;SRP=886.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:69:68,0:68:2656:0:0:0,-20.47,-238.765 0/0:75:75,0:75:2984:0:0:0,-22.5772,-268.659 0/1:64:58,6:58:2317:6:242:-2.89103,0,-189.425 0/1:82:70,12:70:2774:12:479:-18.7711,0,-225.096 0/1:63:45,18:45:1782:18:686:-43.0899,0,-141.631 0/1:110:91,19:91:3628:19:771:-36.5967,0,-293.441 dDocent_Contig_3501 21 . A C 957.274 . AB=0.28;ABP=66.0699;AC=2;AF=0.166667;AN=12;AO=53;CIGAR=1X;DP=432;DPB=432;DPRA=1;EPP=118.098;EPPR=825.998;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.90566;PAIREDR=0.899736;PAO=0;PQA=0;PQR=0;PRO=0;QA=2016;QR=13965;RO=379;RPL=0;RPP=118.098;RPPR=825.998;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=379;SRP=825.998;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:72:68,4:68:2479:4:155:0,-7.34872,-209.017 0/0:72:72,0:72:2649:0:0:0,-21.6742,-238.63 0/0:49:47,2:47:1735:2:75:0,-7.63013,-149.301 0/0:89:84,5:84:3078:5:192:0,-9.14153,-259.56 0/1:70:48,22:48:1785:22:820:-53.0436,0,-139.844 0/1:80:60,20:60:2239:20:774:-45.9056,0,-177.665 dDocent_Contig_3502 15 . G A 1818.78 . AB=0.466667;ABP=4.31318;AC=3;AF=0.25;AN=12;AO=65;CIGAR=1X;DP=513;DPB=513;DPRA=0.279635;EPP=144.156;EPPR=975.83;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2572;QR=17852;RO=448;RPL=0;RPP=144.156;RPPR=975.83;RPR=65;RUN=1;SAF=65;SAP=144.156;SAR=0;SRF=448;SRP=975.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:49:47,2:47:1857:2:52:0,-9.81564,-162.398 0/1:51:27,24:27:1081:24:950:-70.4477,0,-82.2196 0/1:34:8,26:8:320:26:1045:-84.1068,0,-18.9321 0/1:50:37,13:37:1463:13:525:-32.5457,0,-116.858 0/0:157:157,0:157:6272:0:0:0,-47.2617,-564.226 0/0:172:172,0:172:6859:0:0:0,-51.7772,-616.99 dDocent_Contig_3503 108 . C T 562.763 . AB=0.333333;ABP=18.9344;AC=3;AF=0.25;AN=12;AO=23;CIGAR=1X;DP=134;DPB=134;DPRA=1.13415;EPP=52.9542;EPPR=244.044;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.608696;PAIREDR=0.63964;PAO=0;PQA=0;PQR=0;PRO=0;QA=928;QR=4341;RO=111;RPL=0;RPP=52.9542;RPPR=244.044;RPR=23;RUN=1;SAF=0;SAP=52.9542;SAR=23;SRF=0;SRP=244.044;SRR=111;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:639:0:0:0,-5.11751,-57.8277 0/1:22:14,8:14:547:8:327:-23.1774,0,-42.9397 0/0:24:24,0:24:966:0:0:0,-7.22472,-87.2368 0/0:27:26,1:26:1035:1:41:0,-4.03324,-89.3496 0/1:25:13,12:13:515:12:483:-36.2935,0,-39.1682 0/1:19:17,2:17:639:2:77:-1.58863,0,-52.1039 dDocent_Contig_3504 10 . T C 4346.13 . AB=0.225731;ABP=561.653;AC=2;AF=0.166667;AN=12;AO=196;CIGAR=1M1X1M2X;DP=1526;DPB=1528.2;DPRA=2.815;EPP=428.619;EPPR=2849.81;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=59.9939;NS=6;NUMALT=2;ODDS=0;PAIRED=0.994898;PAIREDR=0.999237;PAO=0;PQA=0;PQR=0;PRO=0;QA=7840;QR=51559;RO=1311;RPL=0;RPP=428.619;RPPR=2849.81;RPR=196;RUN=1;SAF=196;SAP=428.619;SAR=0;SRF=1311;SRP=2849.81;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:164:149,0,10:149:5844:0,10:0,385:0,-44.8535,-525.472,-13.2042,-493.861,-490.851 0|0:271:268,3,0:268:10571:3,0:121,0:0,-70.2991,-939.555,-80.676,-940.458,-950.432 0|0:103:103,0,0:103:4043:0,0:0,0:0,-31.0061,-363.897,-31.0061,-363.897,-363.897 0|0:133:132,0,0:132:5195:0,0:0,0:0,-39.736,-467.071,-39.736,-467.071,-467.071 0|1:472:365,104,0:365:14319:104,0:4152,0:-232.064,0,-1146.24,-341.94,-1177.54,-1519.49 0|1:383:294,89,0:294:11587:89,0:3567,0:-205.771,0,-926.89,-294.274,-953.681,-1247.56 dDocent_Contig_3506 29 . C A 4539.42 . AB=0.16785;ABP=1487.35;AC=2;AF=0.166667;AN=12;AO=401;CIGAR=1X;DP=5078;DPB=5078;DPRA=0;EPP=873.771;EPPR=10135.1;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=0.997506;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=15792;QR=185441;RO=4666;RPL=0;RPP=873.771;RPPR=10135.1;RPR=401;RUN=1;SAF=401;SAP=873.771;SAR=0;SRF=4666;SRP=10135.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:759:629,130:629:24896:130:5148:-234.72,0,-2010.03 0/0:899:826,73:826:32759:73:2876:0,-11.6698,-2686.45 0/1:790:658,130:658:26206:130:5113:-222.443,0,-2118.61 0/0:799:778,21:778:30955:21:826:0,-165.87,-2708.56 0/0:912:889,22:889:35417:22:844:0,-198.176,-3108.04 0/0:919:886,25:886:35208:25:985:0,-185.692,-3076.57 dDocent_Contig_3507 147 . N G 972.053 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=26;CIGAR=1X;DP=26;DPB=26;DPRA=0;EPP=59.4686;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0.576923;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1051;QR=0;RO=0;RPL=26;RPP=59.4686;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=59.4686;SAR=26;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 1/1:10:0,10:0:0:10:405:-36.81,-3.0103,0 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 1/1:11:0,11:0:0:11:442:-40.1354,-3.31133,0 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_3508 19 . G A 90.4594 . AB=0.0903361;ABP=696.878;AC=1;AF=0.0833333;AN=12;AO=55;CIGAR=1X;DP=3477;DPB=3477;DPRA=0.985722;EPP=122.441;EPPR=7427.27;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2165;QR=134796;RO=3419;RPL=0;RPP=122.441;RPPR=7427.27;RPR=55;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=3419;SRP=7427.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:561:560,0:560:21909:0:0:0,-168.577,-1969.68 0/0:700:699,0:699:27497:0:0:0,-210.42,-2472.04 0/0:490:490,0:490:19382:0:0:0,-147.505,-1742.82 0/0:539:538,1:538:21348:1:26:0,-159.655,-1916.97 0/1:476:433,43:433:17041:43:1707:-10.5688,0,-1389.12 0/0:711:699,11:699:27619:11:432:0,-174.9,-2444.14 dDocent_Contig_3509 98 . N C 403.555 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=14;CIGAR=1X;DP=15;DPB=15;DPRA=0;EPP=33.4109;EPPR=0;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0.714286;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=429;QR=0;RO=0;RPL=14;RPP=33.4109;RPPR=0;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:66:-6.26836,-0.60206,0 1/1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 1/1:4:0,4:0:0:4:127:-11.7448,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:8:0,7:0:0:7:205:-18.6399,-2.10721,0 dDocent_Contig_3510 27 . G A 514.753 . AB=0.247312;ABP=54.5886;AC=2;AF=0.166667;AN=12;AO=25;CIGAR=1X;DP=332;DPB=332;DPRA=0.551402;EPP=57.2971;EPPR=669.652;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993485;PAO=0;PQA=0;PQR=0;PRO=0;QA=990;QR=12258;RO=307;RPL=0;RPP=57.2971;RPPR=669.652;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=307;SRP=669.652;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:23,2:23:915:2:79:0,-0.0285055,-75.1582 0/0:84:84,0:84:3326:0:0:0,-25.2865,-299.402 0/1:30:21,9:21:851:9:363:-24.0034,0,-67.8706 0/1:63:49,14:49:1981:14:548:-30.6931,0,-159.513 0/0:54:54,0:54:2152:0:0:0,-16.2556,-193.852 0/0:76:76,0:76:3033:0:0:0,-22.8783,-273.058 dDocent_Contig_3511 121 . A C 19597.1 . AB=0.63125;ABP=74.8317;AC=8;AF=0.666667;AN=12;AO=722;CIGAR=1X;DP=934;DPB=934;DPRA=0;EPP=1570.81;EPPR=461.191;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.995845;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=24661;QR=7378;RO=211;RPL=0;RPP=1570.81;RPPR=461.191;RPR=722;RUN=1;SAF=0;SAP=1570.81;SAR=722;SRF=0;SRP=461.191;SRR=211;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:91:35,56:35:1204:56:1933:-146.85,0,-81.2613 0/1:129:77,52:77:2676:52:1774:-121.102,0,-202.253 0/1:93:21,72:21:750:72:2451:-192.839,0,-39.8304 0/1:167:44,123:44:1542:123:4131:-321.701,0,-88.7989 1/1:277:24,252:24:851:252:8609:-697.928,-6.53459,0 1/1:177:10,167:10:355:167:5763:-486.514,-20.9919,0 dDocent_Contig_3512 106 . N A 6784.36 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=230;CIGAR=2X;DP=230;DPB=230;DPRA=0;EPP=502.449;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=59.6913;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=7511;QR=0;RO=0;RPL=0;RPP=502.449;RPPR=0;RPR=230;RUN=1;SAF=0;SAP=502.449;SAR=230;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:27:0,27:0:0:27:911:-82.3009,-8.12781,0 1|1:48:0,48:0:0:48:1562:-140.801,-14.4494,0 1|1:13:0,13:0:0:13:444:-40.2879,-3.91339,0 1|1:61:0,61:0:0:61:1961:-176.76,-18.3628,0 1|1:53:0,53:0:0:53:1738:-156.67,-15.9546,0 1|1:28:0,28:0:0:28:895:-80.8384,-8.42884,0 dDocent_Contig_3513 47 . G C 112450 . AB=0.692288;ABP=1260.67;AC=7;AF=0.583333;AN=12;AO=3527;CIGAR=1X;DP=4748;DPB=4748;DPRA=0;EPP=7661.79;EPPR=2632.69;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=138895;QR=47503;RO=1219;RPL=0;RPP=7661.79;RPPR=2632.69;RPR=3527;RUN=1;SAF=3527;SAP=7661.79;SAR=0;SRF=1219;SRP=2650.04;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:692:264,427:264:10195:427:16770:-1299.99,0,-708.929 0/1:824:297,527:297:11626:527:20726:-1615.68,0,-797.569 0/1:657:244,413:244:9566:413:16394:-1276.44,0,-662.613 0/1:857:278,578:278:10819:578:22738:-1786.84,0,-715.344 1/1:832:16,816:16:627:816:32084:-2828.07,-193.694,0 0/1:886:120,766:120:4670:766:30183:-2447.19,0,-153.55 dDocent_Contig_3514 9 . T A 569.24 . AB=0.132832;ABP=470.225;AC=3;AF=0.25;AN=12;AO=56;CIGAR=1X;DP=761;DPB=761;DPRA=0.992157;EPP=124.613;EPPR=1531.73;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.990057;PAO=0;PQA=0;PQR=0;PRO=0;QA=2131;QR=26987;RO=704;RPL=0;RPP=124.613;RPPR=1531.73;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=704;SRP=1531.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:129:115,14:115:4421:14:534:-9.57083,0,-359.117 0/0:163:163,0:163:6249:0:0:0,-49.0679,-562.336 0/0:92:92,0:92:3550:0:0:0,-27.6948,-319.62 0/0:107:104,3:104:4002:3:117:0,-21.2998,-349.359 0/1:105:92,12:92:3513:12:464:-10.4978,0,-284.689 0/1:165:138,27:138:5252:27:1016:-42.0772,0,-423.012 dDocent_Contig_3515 26 . C T 49.1102 . AB=0.0921053;ABP=442.333;AC=1;AF=0.0833333;AN=12;AO=47;CIGAR=1X;DP=1715;DPB=1715;DPRA=1.06193;EPP=105.07;EPPR=3625.03;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996403;PAO=0;PQA=0;PQR=0;PRO=0;QA=1810;QR=66032;RO=1668;RPL=0;RPP=105.07;RPPR=3625.03;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=1668;SRP=3625.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:222:214,8:214:8450:8:295:0,-39.935,-733.151 0/1:304:276,28:276:11060:28:1085:-6.43389,0,-903.141 0/0:114:114,0:114:4497:0:0:0,-34.3174,-404.674 0/0:249:239,10:239:9403:10:391:0,-39.4086,-810.195 0/0:435:435,0:435:17215:0:0:0,-130.948,-1548 0/0:391:390,1:390:15407:1:39:0,-113.806,-1381.58 dDocent_Contig_3516 28 . A G 25678.4 . AB=0.230884;ABP=3367.86;AC=6;AF=0.5;AN=12;AO=1235;CIGAR=2X3M1X;DP=5349;DPB=5349;DPRA=0;EPP=2684.78;EPPR=8890.85;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.996761;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=46509;QR=160852;RO=4093;RPL=0;RPP=2684.78;RPPR=8890.85;RPR=1235;RUN=1;SAF=1235;SAP=2684.78;SAR=0;SRF=4093;SRP=8890.85;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:837:582,251:582:22788:251:9435:-597.766,0,-1798.16 0|1:981:719,258:719:28204:258:9715:-579.64,0,-2241.79 0|1:630:461,163:461:18154:163:6193:-369.114,0,-1444.39 0|1:962:690,270:690:27083:270:10169:-625.691,0,-2146.19 0|1:1036:935,98:935:36869:98:3658:-18.1262,0,-3003.97 0|1:903:706,195:706:27754:195:7339:-388.728,0,-2224.08 dDocent_Contig_3517 67 . T G 531.663 . AB=0.146154;ABP=285.769;AC=2;AF=0.166667;AN=12;AO=45;CIGAR=1X;DP=838;DPB=838;DPRA=0.910774;EPP=100.727;EPPR=1722.82;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.977778;PAIREDR=0.901515;PAO=0;PQA=0;PQR=0;PRO=0;QA=1767;QR=31030;RO=792;RPL=45;RPP=100.727;RPPR=1722.82;RPR=0;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=792;SRP=1722.82;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:130:130,0:130:5081:0:0:0,-39.1339,-457.216 0/0:149:145,4:145:5634:4:159:0,-30.1615,-492.231 0/0:132:129,3:129:5133:3:119:0,-28.6415,-450.769 0/0:167:166,0:166:6502:0:0:0,-49.971,-584.546 0/1:146:127,19:127:4995:19:760:-24.7725,0,-405.521 0/1:114:95,19:95:3685:19:729:-31.6157,0,-297.374 dDocent_Contig_3518 33 . G C 987.043 . AB=0.122807;ABP=918.724;AC=2;AF=0.166667;AN=12;AO=160;CIGAR=1X2M1X;DP=1988;DPB=1988;DPRA=0;EPP=350.446;EPPR=3918.18;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.98125;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6320;QR=71246;RO=1803;RPL=0;RPP=350.446;RPPR=3918.18;RPR=160;RUN=1;SAF=160;SAP=350.446;SAR=0;SRF=1803;SRP=3918.18;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:243:219,11:219:8653:11:425:0,-31.0215,-739.743 0|0:362:335,26:335:13162:26:1034:0,-15.7144,-1090.37 0|1:394:331,60:331:13107:60:2360:-94.5587,0,-1060.75 0|1:347:309,31:309:12263:31:1220:-7.36746,0,-1000.17 0|0:286:279,7:279:10979:7:277:0,-60.7948,-962.18 0|0:356:330,25:330:13082:25:1004:0,-16.6164,-1085.84 dDocent_Contig_3519 44 . G C 420.652 . AB=0.198113;ABP=86.9193;AC=1;AF=0.0833333;AN=12;AO=36;CIGAR=1X;DP=1142;DPB=1142;DPRA=0.4275;EPP=81.1833;EPPR=2404.66;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1426;QR=43644;RO=1106;RPL=0;RPP=81.1833;RPPR=2404.66;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=1106;SRP=2404.66;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:106:85,21:85:3342:21:832:-43.287,0,-268.935 0/0:109:102,7:102:4031:7:269:0,-8.24687,-338.233 0/0:127:119,8:119:4661:8:325:0,-8.61138,-389.803 0/0:184:184,0:184:7280:0:0:0,-55.3895,-654.878 0/0:320:320,0:320:12535:0:0:0,-96.3296,-1127.34 0/0:296:296,0:296:11795:0:0:0,-89.1049,-1060.75 dDocent_Contig_3521 10 . G C 107558 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=3085;CIGAR=1X;DP=3168;DPB=3168;DPRA=0;EPP=6702;EPPR=178.9;GTI=0;LEN=1;MEANALT=1.33333;MQM=59.836;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.994814;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=123025;QR=3252;RO=81;RPL=0;RPP=6702;RPPR=178.9;RPR=3085;RUN=1;SAF=3085;SAP=6702;SAR=0;SRF=81;SRP=178.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:587:16,570:16:641:570:22660:-1976.46,-118.498,0 1/1:785:32,753:32:1269:753:30112:-2588.67,-121.832,0 1/1:606:8,598:8:319:598:23881:-2116.75,-153.35,0 1/1:653:13,639:13:533:639:25497:-2242.08,-148.356,0 1/1:188:3,185:3:122:185:7410:-653.627,-45.2211,0 1/1:349:9,340:9:368:340:13465:-1177.37,-71.5741,0 dDocent_Contig_3522 17 . T C 1566.96 . AB=0.204787;ABP=287.635;AC=3;AF=0.25;AN=12;AO=80;CIGAR=1X;DP=741;DPB=741;DPRA=0.773196;EPP=176.728;EPPR=1378.2;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.9875;PAIREDR=0.959153;PAO=0;PQA=0;PQR=0;PRO=0;QA=3170;QR=26393;RO=661;RPL=0;RPP=176.728;RPPR=1438.35;RPR=80;RUN=1;SAF=80;SAP=176.728;SAR=0;SRF=654;SRP=1378.2;SRR=7;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:119:84,35:84:3321:35:1375:-88.1795,0,-263.126 0/1:152:124,28:124:4966:28:1109:-54.3341,0,-401.058 0/0:74:71,3:71:2809:3:123:0,-10.8114,-241.444 0/1:105:91,14:91:3657:14:563:-19.4042,0,-297.527 0/0:137:137,0:137:5482:0:0:0,-41.2411,-493.203 0/0:154:154,0:154:6158:0:0:0,-46.3586,-553.956 dDocent_Contig_3523 1 . N G 76.8682 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_3524 24 . C T 11225.4 . AB=0.379406;ABP=139.181;AC=6;AF=0.5;AN=12;AO=409;CIGAR=1X;DP=1078;DPB=1078;DPRA=0;EPP=891.143;EPPR=1453.55;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.9829;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.745721;PAIREDR=0.726048;PAO=0;PQA=0;PQR=0;PRO=0;QA=16193;QR=26664;RO=668;RPL=0;RPP=891.143;RPPR=1453.55;RPR=409;RUN=1;SAF=409;SAP=891.143;SAR=0;SRF=668;SRP=1453.55;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:142:85,57:85:3436:57:2226:-157.766,0,-266.52 0/1:216:126,90:126:5041:90:3577:-256.944,0,-388.539 0/1:160:107,53:107:4230:53:2074:-138.682,0,-332.493 0/1:196:111,85:111:4399:85:3389:-246.053,0,-336.849 0/1:173:119,53:119:4788:53:2077:-135.222,0,-378.931 0/1:191:120,71:120:4770:71:2850:-199.095,0,-371.71 dDocent_Contig_3525 209 . N G 157.675 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=163;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_3526 36 . C A 110.686 . AB=0.140625;ABP=74.8046;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=443;DPB=443;DPRA=1.07009;EPP=26.8965;EPPR=941.086;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=431;QR=17240;RO=432;RPL=0;RPP=26.8965;RPPR=941.086;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=432;SRP=941.086;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:48,0:48:1919:0:0:0,-14.4494,-172.909 0/0:60:60,0:60:2383:0:0:0,-18.0618,-214.623 0/1:64:55,9:55:2197:9:350:-12.5915,0,-178.639 0/0:52:51,1:51:2043:1:41:0,-11.559,-179.958 0/0:106:106,0:106:4220:0:0:0,-31.9092,-379.773 0/0:113:112,1:112:4478:1:40:0,-30.0207,-398.964 dDocent_Contig_3527 98 . N G 324.392 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=10;CIGAR=1X;DP=10;DPB=10;DPRA=0;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=344;QR=0;RO=0;RPL=10;RPP=24.725;RPPR=0;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:7:0,7:0:0:7:243:-22.2089,-2.10721,0 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_3528 61 . T A 39.0264 . AB=0.121212;ABP=44.1367;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=199;DPB=199;DPRA=1.40171;EPP=13.8677;EPPR=424.276;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.57732;PAO=0;PQA=0;PQR=0;PRO=0;QA=204;QR=7589;RO=194;RPL=5;RPP=13.8677;RPPR=424.276;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=194;SRP=424.276;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:29,4:29:1154:4:163:-5.12444,0,-94.207 0/0:31:31,0:31:1174:0:0:0,-9.33193,-105.921 0/0:23:23,0:23:884:0:0:0,-6.92369,-79.8531 0/0:34:34,0:34:1358:0:0:0,-10.235,-122.48 0/0:29:29,0:29:1104:0:0:0,-8.72987,-99.6404 0/0:49:48,1:48:1915:1:41:0,-10.6559,-168.461 dDocent_Contig_3529 30 . C A 3260.86 . AB=0.161937;ABP=1192.24;AC=1;AF=0.0833333;AN=12;AO=222;CIGAR=1X;DP=5819;DPB=5819;DPRA=1.06421;EPP=485.077;EPPR=12156.7;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998749;PAO=0;PQA=0;PQR=0;PRO=0;QA=8773;QR=223514;RO=5597;RPL=0;RPP=485.077;RPPR=12156.7;RPR=222;RUN=1;SAF=222;SAP=485.077;SAR=0;SRF=5597;SRP=12156.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:871:871,0:871:34736:0:0:0,-262.197,-3122.99 0/0:978:978,0:978:39125:0:0:0,-294.407,-3517.51 0/0:636:635,1:635:25356:1:41:0,-187.361,-2275.64 0/0:970:970,0:970:38889:0:0:0,-291.999,-3496.27 0/1:1198:1004,194:1004:39973:194:7651:-327.609,0,-3233.15 0/0:1166:1139,27:1139:45435:27:1081:0,-253.422,-3987.22 dDocent_Contig_3530 99 . G A 10006.4 . AB=0.324597;ABP=400.652;AC=6;AF=0.5;AN=12;AO=483;CIGAR=1X;DP=1488;DPB=1488;DPRA=0;EPP=1051.83;EPPR=2086.5;GTI=0;LEN=1;MEANALT=1.33333;MQM=58.7267;MQMR=52.8524;NS=6;NUMALT=1;ODDS=0;PAIRED=0.10352;PAIREDR=0.629113;PAO=0;PQA=0;PQR=0;PRO=0;QA=16320;QR=34259;RO=1003;RPL=431;RPP=648.792;RPPR=1337.12;RPR=52;RUN=1;SAF=431;SAP=648.792;SAR=52;SRF=98;SRP=1412.95;SRR=905;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:207:154,52:154:5260:52:1742:-94.9247,0,-396.891 0/1:178:147,31:147:5003:31:1058:-41.9434,0,-384.606 0/1:178:142,36:142:4906:36:1234:-57.2222,0,-376.78 0/1:266:206,59:206:7095:59:1983:-89.8479,0,-546.409 0/1:348:172,176:172:5762:176:5959:-430.472,0,-401.341 0/1:311:182,129:182:6233:129:4344:-297.451,0,-449.934 dDocent_Contig_3531 83 . T A 5394.34 . AB=0.559796;ABP=15.2159;AC=6;AF=0.5;AN=12;AO=220;CIGAR=1X2M2X;DP=393;DPB=393.6;DPRA=0;EPP=480.734;EPPR=367.818;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.618182;PAIREDR=0.77381;PAO=0;PQA=0;PQR=0;PRO=0;QA=7407;QR=5760;RO=168;RPL=220;RPP=480.734;RPPR=367.818;RPR=0;RUN=1;SAF=220;SAP=480.734;SAR=0;SRF=0;SRP=367.818;SRR=168;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:79:36,43:36:1237:43:1427:-104.94,0,-87.8525 0|1:73:19,53:19:646:53:1794:-139.721,0,-36.4354 0|1:60:29,30:29:997:30:1029:-74.81,0,-71.9316 0|1:75:36,38:36:1217:38:1281:-93.1295,0,-87.371 0|1:52:24,26:24:826:26:846:-61.3009,0,-59.5145 0|1:54:24,30:24:837:30:1030:-76.7548,0,-59.3941 dDocent_Contig_3532 15 . T A 37276.6 . AB=0.781746;ABP=1045.52;AC=6;AF=0.5;AN=12;AO=1182;CIGAR=1X;DP=1512;DPB=1512;DPRA=0;EPP=2569.69;EPPR=717.425;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=46625;QR=13115;RO=329;RPL=0;RPP=2569.69;RPPR=717.425;RPR=1182;RUN=1;SAF=1182;SAP=2569.69;SAR=0;SRF=329;SRP=717.425;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:92:28,64:28:1113:64:2547:-201.673,0,-72.7641 0/1:151:32,119:32:1275:119:4702:-377.66,0,-69.5637 0/1:125:18,107:18:724:107:4251:-344.936,0,-27.8575 0/1:118:24,94:24:963:94:3680:-295.708,0,-51.4514 0/1:481:127,353:127:5062:353:13880:-1103.45,0,-310.669 0/1:545:100,445:100:3978:445:17565:-1415.45,0,-193.957 dDocent_Contig_3533 66 . A C 852.523 . AB=0.129433;ABP=675.72;AC=5;AF=0.416667;AN=12;AO=78;CIGAR=1X;DP=688;DPB=688;DPRA=0;EPP=172.385;EPPR=1325.44;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995074;PAO=0;PQA=0;PQR=0;PRO=0;QA=3102;QR=23907;RO=609;RPL=78;RPP=172.385;RPPR=1325.44;RPR=0;RUN=1;SAF=78;SAP=172.385;SAR=0;SRF=609;SRP=1325.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:124:119,5:119:4696:5:187:0,-20.141,-405.393 0/1:141:126,15:126:4898:15:602:-12.0741,0,-398.305 0/1:87:76,10:76:2958:10:405:-10.8305,0,-240.376 0/1:124:100,24:100:3940:24:954:-48.8308,0,-317.275 0/1:112:100,12:100:3908:12:486:-10.3763,0,-318.012 0/1:100:88,12:88:3507:12:468:-12.3624,0,-285.566 dDocent_Contig_3534 30 . G T 15197.8 . AB=0.180965;ABP=3867.31;AC=6;AF=0.5;AN=12;AO=791;CIGAR=1X;DP=4371;DPB=4371;DPRA=0;EPP=1720.64;EPPR=7772.54;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998736;PAIREDR=0.998882;PAO=0;PQA=0;PQR=0;PRO=0;QA=31640;QR=142067;RO=3578;RPL=0;RPP=1720.64;RPPR=7772.54;RPR=791;RUN=1;SAF=791;SAP=1720.64;SAR=0;SRF=3578;SRP=7772.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:948:794,154:794:31546:154:6164:-269.139,0,-2550.9 0/1:1112:898,214:898:35623:214:8509:-430.578,0,-2868.02 0/1:845:723,122:723:28750:122:4901:-186.598,0,-2330.58 0/1:867:646,220:646:25623:220:8821:-532.305,0,-2042.77 0/1:335:302,33:302:11992:33:1302:-16.5952,0,-977.604 0/1:264:215,48:215:8533:48:1943:-95.7834,0,-688.21 dDocent_Contig_3535 23 . C T 128.126 . AB=0.195122;ABP=36.112;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=143;DPB=143;DPRA=0.803922;EPP=20.3821;EPPR=296.159;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.807407;PAO=0;PQA=0;PQR=0;PRO=0;QA=307;QR=5424;RO=135;RPL=0;RPP=20.3821;RPPR=296.159;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=135;SRP=296.159;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:791:0:0:0,-6.0206,-71.5037 0/0:31:31,0:31:1240:0:0:0,-9.33193,-111.869 0/0:35:35,0:35:1412:0:0:0,-10.536,-127.327 0/0:16:16,0:16:643:0:0:0,-4.81648,-58.2009 0/1:18:13,5:13:529:5:189:-11.9547,0,-42.5381 0/1:23:20,3:20:809:3:118:-4.0792,0,-66.2026 dDocent_Contig_3536 49 . C A 57025.3 . AB=0.762572;ABP=1455.8;AC=6;AF=0.5;AN=12;AO=1850;CIGAR=1X;DP=2426;DPB=2426;DPRA=0;EPP=3994.22;EPPR=1251.61;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.977297;PAIREDR=0.968696;PAO=0;PQA=0;PQR=0;PRO=0;QA=71646;QR=22633;RO=575;RPL=3;RPP=3994.22;RPPR=1251.61;RPR=1847;RUN=1;SAF=1850;SAP=4020.23;SAR=0;SRF=575;SRP=1251.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:378:78,300:78:3045:300:11663:-935.227,0,-160.352 0/1:466:137,328:137:5398:328:12738:-1005.36,0,-345.361 0/1:287:73,214:73:2930:214:8246:-655.396,0,-177.393 0/1:435:104,331:104:4068:331:12844:-1024.24,0,-235.154 0/1:415:90,325:90:3537:325:12449:-994.786,0,-193.439 0/1:445:93,352:93:3655:352:13706:-1098.74,0,-195.02 dDocent_Contig_3537 12 . G A 47895.5 . AB=0.238031;ABP=1322.76;AC=10;AF=0.833333;AN=12;AO=527;CIGAR=1X3M;DP=2214;DPB=2214;DPRA=0;EPP=1147.38;EPPR=763.026;GTI=0;LEN=1;MEANALT=3.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.996205;PAIREDR=0.991429;PAO=0;PQA=0;PQR=0;PRO=0;QA=20945;QR=13606;RO=350;RPL=0;RPP=1147.38;RPPR=763.026;RPR=527;RUN=1;SAF=527;SAP=1147.38;SAR=0;SRF=350;SRP=763.026;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:438:56,283,94:56:2188:283,94:11186,3775:-1034.81,-131.193,-225.872,-740.61,0,-892.186 1|1:500:72,296,109:72:2786:296,109:11678,4318:-1065.69,-126.547,-266.274,-731.991,0,-928.012 0|1:444:80,289,58:80:3119:289,58:11399,2282:-913.766,0,-169.363,-750.165,-68.6747,-989.065 0|1:441:91,273,71:91:3551:273,71:10741,2842:-856.101,0,-209.71,-649.386,-57.78,-919.908 1|1:187:8,77,102:8:313:77,102:3011,4075:-555.015,-309.899,-312.454,-221.793,0,-216.823 1|1:204:43,68,93:43:1649:68,93:2711,3653:-375.393,-165.082,-279.941,-87.9359,0,-195.267 dDocent_Contig_3538 25 . A G 62.2911 . AB=0.114754;ABP=81.6461;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=406;DPB=406;DPRA=0.884058;EPP=18.2106;EPPR=865.085;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.959698;PAO=0;PQA=0;PQR=0;PRO=0;QA=286;QR=15876;RO=397;RPL=0;RPP=18.2106;RPPR=865.085;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=397;SRP=865.085;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:56:54,0:54:2164:0:0:0,-16.2556,-194.533 0/0:101:101,0:101:4012:0:0:0,-30.404,-361.061 0/0:49:49,0:49:1968:0:0:0,-14.7505,-177.311 0/0:62:62,0:62:2493:0:0:0,-18.6639,-224.509 0/0:77:77,0:77:3061:0:0:0,-23.1793,-275.578 0/1:61:54,7:54:2178:7:286:-7.75199,0,-177.826 dDocent_Contig_3539 19 . G A 7850.5 . AB=0.26634;ABP=583.46;AC=5;AF=0.416667;AN=12;AO=344;CIGAR=1X;DP=1492;DPB=1492;DPRA=0;EPP=749.997;EPPR=2493.69;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.991279;PAIREDR=0.99041;PAO=0;PQA=0;PQR=0;PRO=0;QA=13641;QR=45435;RO=1147;RPL=0;RPP=749.997;RPPR=2493.69;RPR=344;RUN=1;SAF=344;SAP=749.997;SAR=0;SRF=1147;SRP=2493.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:279:191,88:191:7604:88:3486:-229.795,0,-599.991 0/1:291:176,115:176:6941:115:4591:-325.506,0,-536.807 0/1:134:92,42:92:3652:42:1686:-111.628,0,-288.372 0/1:231:195,36:195:7734:36:1403:-56.981,0,-626.139 0/0:268:249,18:249:9870:18:729:0,-14.5938,-821.777 0/1:289:244,45:244:9634:45:1746:-70.3616,0,-779.492 dDocent_Contig_3540 32 . T C 208.51 . AB=0.0571429;ABP=62.6327;AC=3;AF=0.25;AN=12;AO=2;CIGAR=1X1M;DP=138;DPB=138;DPRA=1.98113;EPP=7.35324;EPPR=267.93;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.631148;PAO=0;PQA=0;PQR=0;PRO=0;QA=78;QR=4837;RO=122;RPL=0;RPP=7.35324;RPPR=267.93;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=122;SRP=267.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:21:21,0,0:21:813:0,0:0,0:0,-6.32163,-73.4808,-6.32163,-73.4808,-73.4808 0|1:35:26,7,2:26:1035:7,2:280,78:-15.2448,0,-83.1195,-16.6622,-78.8157,-101.278 0|0:11:11,0,0:11:436:0,0:0,0:0,-3.31133,-39.5929,-3.31133,-39.5929,-39.5929 0|1:26:22,4,0:22:870:4,0:159,0:-6.86466,0,-70.785,-13.4873,-71.9891,-85.0797 0|0:21:21,0,0:21:842:0,0:0,0:0,-6.32163,-76.0939,-6.32163,-76.0939,-76.0939 0|1:24:21,3,0:21:841:3,0:120,0:-3.96259,0,-68.7789,-10.2842,-69.682,-79.5666 dDocent_Contig_3541 21 . A G 166.326 . AB=0.0923913;ABP=799.61;AC=1;AF=0.0833333;AN=12;AO=134;CIGAR=1X;DP=3422;DPB=3422;DPRA=0.739855;EPP=293.988;EPPR=7142.81;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.992537;PAIREDR=0.999088;PAO=0;PQA=0;PQR=0;PRO=0;QA=5362;QR=130315;RO=3288;RPL=0;RPP=293.988;RPPR=7142.81;RPR=134;RUN=1;SAF=134;SAP=293.988;SAR=0;SRF=3288;SRP=7142.81;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:527:495,32:495:19615:32:1294:0,-41.9211,-1647.03 0/0:604:571,33:571:22564:33:1320:0,-62.7575,-1909.83 0/0:359:341,18:341:13554:18:702:0,-44.5707,-1155.38 0/1:552:501,51:501:19842:51:2046:-18.1555,0,-1617.98 0/0:730:730,0:730:28976:0:0:0,-219.752,-2605.3 0/0:650:650,0:650:25764:0:0:0,-195.669,-2316.54 dDocent_Contig_3542 27 . A C 66166.9 . AB=0.833333;ABP=1247.99;AC=9;AF=0.75;AN=12;AO=2019;CIGAR=1X;DP=2297;DPB=2297;DPRA=0;EPP=4387.21;EPPR=602.337;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=80429;QR=10939;RO=276;RPL=0;RPP=4387.21;RPPR=602.337;RPR=2019;RUN=1;SAF=2019;SAP=4387.21;SAR=0;SRF=276;SRP=602.337;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:312:18,294:18:721:294:11712:-988.068,-28.705,0 1/1:340:15,324:15:575:324:12928:-1110.5,-50.3528,0 0/1:327:83,244:83:3271:244:9655:-769.91,0,-196.018 1/1:355:29,326:29:1164:326:13022:-1066,-1.82886,0 0/1:503:77,426:77:3036:426:16944:-1372.19,0,-121.915 0/1:460:54,405:54:2172:405:16168:-1315.24,0,-57.0655 dDocent_Contig_3543 9 . T A 661.563 . AB=0.25641;ABP=63.3104;AC=1;AF=0.0833333;AN=12;AO=38;CIGAR=1X;DP=545;DPB=545;DPRA=1.38509;EPP=85.5263;EPPR=1103.95;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.990138;PAO=0;PQA=0;PQR=0;PRO=0;QA=1444;QR=19241;RO=507;RPL=0;RPP=85.5263;RPPR=1103.95;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=507;SRP=1103.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:91:91,0:91:3484:0:0:0,-27.3937,-313.692 0/0:80:80,0:80:3005:0:0:0,-24.0824,-270.618 0/0:49:49,0:49:1874:0:0:0,-14.7505,-168.909 0/0:102:102,0:102:3863:0:0:0,-30.7051,-347.781 0/0:106:98,8:98:3716:8:304:0,-4.19063,-306.842 0/1:117:87,30:87:3299:30:1140:-67.6792,0,-261.836 dDocent_Contig_3545 153 . T C 8182.82 . AB=0.723757;ABP=160.436;AC=6;AF=0.5;AN=12;AO=262;CIGAR=1X1M;DP=362;DPB=362;DPRA=0;EPP=571.936;EPPR=204.957;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.881679;PAIREDR=0.903226;PAO=0;PQA=0;PQR=0;PRO=0;QA=10404;QR=3610;RO=93;RPL=0;RPP=571.936;RPPR=204.957;RPR=262;RUN=1;SAF=0;SAP=571.936;SAR=262;SRF=0;SRP=204.957;SRR=93;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:46:9,0,36:9:358:0,36:0,1442:-116.068,-118.777,-148.253,0,-29.466,-18.6289 0|1:75:11,0,64:11:437:0,64:0,2492:-201.831,-205.142,-241.118,0,-36.3714,-17.1055 0|1:63:11,0,51:11:446:0,51:0,2053:-166.18,-169.492,-206.273,0,-37.0592,-21.7067 0|1:47:14,0,33:14:537:0,33:0,1335:-106.26,-110.474,-154.537,0,-44.4518,-34.5178 0|1:51:18,4,29:18:709:4,29:135,1113:-85.9551,-80.448,-137.571,0,-47.4487,-49.6398 0|1:80:30,1,49:30:1123:1,49:41,1969:-153.21,-158.856,-250.477,0,-88.5123,-77.1471 dDocent_Contig_3546 14 . T C 173.964 . AB=0.304348;ABP=10.6577;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=220;DPB=220;DPRA=0.875817;EPP=20.3821;EPPR=463.362;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=0.625;PAIREDR=0.448113;PAO=0;PQA=0;PQR=0;PRO=0;QA=324;QR=8480;RO=212;RPL=0;RPP=20.3821;RPPR=463.362;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=212;SRP=463.362;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:50,0:50:1984:0:0:0,-15.0515,-178.76 0/0:46:46,0:46:1838:0:0:0,-13.8474,-165.622 0/1:23:16,7:16:651:7:283:-18.9193,0,-51.9994 0/0:44:43,1:43:1717:1:41:0,-9.15075,-150.657 0/0:33:33,0:33:1336:0:0:0,-9.93399,-120.497 0/0:24:24,0:24:954:0:0:0,-7.22472,-86.1633 dDocent_Contig_3547 11 . A C 47776.6 . AB=0.729938;ABP=958.676;AC=6;AF=0.5;AN=12;AO=1519;CIGAR=1X;DP=2081;DPB=2081;DPRA=0;EPP=3301.48;EPPR=1223.38;GTI=0;LEN=1;MEANALT=1;MQM=59.8894;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999342;PAIREDR=0.996441;PAO=0;PQA=0;PQR=0;PRO=0;QA=60242;QR=22544;RO=562;RPL=0;RPP=3301.48;RPPR=1223.38;RPR=1519;RUN=1;SAF=1519;SAP=3301.48;SAR=0;SRF=562;SRP=1223.38;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:434:93,341:93:3738:341:13453:-1079.12,0,-205.776 0/1:532:168,364:168:6757:364:14492:-1143.02,0,-447.663 0/1:243:86,157:86:3453:157:6219:-486.277,0,-237.656 0/1:456:101,355:101:4066:355:14109:-1128.93,0,-228.643 0/1:168:36,132:36:1437:132:5278:-424.288,0,-79.0073 0/1:248:78,170:78:3093:170:6691:-527.244,0,-203.785 dDocent_Contig_3548 7 . C T 130.416 . AB=0.137931;ABP=102.074;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=892;DPB=892;DPRA=1.22604;EPP=39.9253;EPPR=1903.05;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=638;QR=33541;RO=875;RPL=0;RPP=39.9253;RPPR=1903.05;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=875;SRP=1903.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:104:104,0:104:3991:0:0:0,-31.3071,-359.283 0/1:87:75,12:75:2898:12:449:-14.5645,0,-234.799 0/0:72:72,0:72:2745:0:0:0,-21.6742,-247.236 0/0:88:88,0:88:3363:0:0:0,-26.4906,-302.809 0/0:289:289,0:289:11070:0:0:0,-86.9977,-995.875 0/0:252:247,5:247:9474:5:189:0,-58.4843,-834.97 dDocent_Contig_3549 44 . A T 583.232 . AB=0.182857;ABP=155.894;AC=3;AF=0.25;AN=12;AO=33;CIGAR=1X;DP=435;DPB=435;DPRA=0.506944;EPP=74.6689;EPPR=873.771;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.969697;PAIREDR=0.947631;PAO=0;PQA=0;PQR=0;PRO=0;QA=1319;QR=15698;RO=401;RPL=0;RPP=74.6689;RPPR=873.771;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=401;SRP=873.771;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:57:49,7:49:1927:7:283:-8.73418,0,-156.546 0/1:60:46,14:46:1755:14:565:-33.1309,0,-140.117 0/0:44:43,1:43:1726:1:40:0,-9.24964,-151.564 0/1:58:47,11:47:1850:11:431:-21.68,0,-149.255 0/0:137:137,0:137:5318:0:0:0,-41.2411,-478.506 0/0:79:79,0:79:3122:0:0:0,-23.7814,-281.071 dDocent_Contig_3550 79 . T C 1321.17 . AB=0.164384;ABP=574.375;AC=2;AF=0.166667;AN=12;AO=106;CIGAR=1X;DP=1682;DPB=1682;DPRA=1.13938;EPP=233.186;EPPR=3425.25;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992386;PAO=0;PQA=0;PQR=0;PRO=0;QA=3758;QR=55248;RO=1576;RPL=106;RPP=233.186;RPPR=3425.25;RPR=0;RUN=1;SAF=106;SAP=233.186;SAR=0;SRF=1576;SRP=3425.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:282:280,2:280:9730:2:71:0,-78.1484,-868.938 0/0:345:345,0:345:11848:0:0:0,-103.855,-1066.23 0/0:168:168,0:168:5913:0:0:0,-50.573,-532.251 0/0:303:295,8:295:10482:8:236:0,-69.6886,-921.736 0/1:295:244,51:244:8567:51:1831:-76.2546,0,-682.204 0/1:289:244,45:244:8708:45:1620:-59.0846,0,-696.685 dDocent_Contig_3551 11 . T C 31194.9 . AB=0.710187;ABP=537.928;AC=6;AF=0.5;AN=12;AO=990;CIGAR=1X;DP=1394;DPB=1394;DPRA=0;EPP=2152.77;EPPR=878.114;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.986869;PAIREDR=0.995037;PAO=0;PQA=0;PQR=0;PRO=0;QA=39466;QR=15961;RO=403;RPL=0;RPP=2152.77;RPPR=878.114;RPR=990;RUN=1;SAF=990;SAP=2152.77;SAR=0;SRF=403;SRP=878.114;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:197:56,141:56:2223:141:5587:-443.353,0,-140.938 0/1:228:97,130:97:3868:130:5226:-401.667,0,-279.601 0/1:278:95,183:95:3773:183:7287:-571.782,0,-255.889 0/1:200:40,160:40:1576:160:6375:-513.287,0,-81.8774 0/1:234:77,157:77:2995:157:6278:-494.316,0,-199.21 0/1:257:38,219:38:1526:219:8713:-706.308,0,-60.2134 dDocent_Contig_3552 11 . A C 324.752 . AB=0.27451;ABP=25.534;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=240;DPB=240;DPRA=0.539683;EPP=33.4109;EPPR=493.763;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.928571;PAIREDR=0.615044;PAO=0;PQA=0;PQR=0;PRO=0;QA=559;QR=8989;RO=226;RPL=0;RPP=33.4109;RPPR=493.763;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=226;SRP=493.763;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:59,0:59:2339:0:0:0,-17.7608,-210.671 0/0:54:54,0:54:2145:0:0:0,-16.2556,-193.22 0/0:31:31,0:31:1229:0:0:0,-9.33193,-110.88 0/0:45:45,0:45:1801:0:0:0,-13.5463,-162.303 0/1:13:6,7:6:242:7:275:-21.2024,0,-18.2436 0/1:38:31,7:31:1233:7:284:-14.4946,0,-99.8033 dDocent_Contig_3553 11 . A C 1686.04 . AB=0.261029;ABP=137.929;AC=4;AF=0.333333;AN=12;AO=73;CIGAR=1X;DP=370;DPB=370;DPRA=1.12143;EPP=161.528;EPPR=647.938;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.917808;PAIREDR=0.892256;PAO=0;PQA=0;PQR=0;PRO=0;QA=2931;QR=11888;RO=297;RPL=0;RPP=161.528;RPPR=647.938;RPR=73;RUN=1;SAF=73;SAP=161.528;SAR=0;SRF=297;SRP=647.938;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:42:40,2:40:1591:2:82:0,-4.86358,-135.642 0/1:79:71,8:71:2844:8:326:-5.9285,0,-232.276 0/1:59:50,9:50:1991:9:354:-14.457,0,-161.619 0/0:56:56,0:56:2226:0:0:0,-16.8577,-200.505 0/1:54:32,22:32:1301:22:888:-63.969,0,-101.094 0/1:80:48,32:48:1935:32:1281:-91.4715,0,-150.259 dDocent_Contig_3554 98 . N C 266.398 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=276;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:6:0,6:0:0:6:187:-17.1375,-1.80618,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:20:-1.99996,-0.30103,0 dDocent_Contig_3555 98 . N A 5729.72 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=194;CIGAR=1X;DP=195;DPB=195;DPRA=0;EPP=424.276;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.6598;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6341;QR=0;RO=0;RPL=194;RPP=424.276;RPPR=0;RPR=0;RUN=1;SAF=194;SAP=424.276;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:46:0,46:0:0:46:1539:-138.781,-13.8474,0 1/1:26:0,26:0:0:26:817:-73.8209,-7.82678,0 1/1:22:0,22:0:0:22:725:-65.4838,-6.62266,0 1/1:39:0,39:0:0:39:1276:-115.128,-11.7402,0 1/1:24:0,23:0:0:23:748:-67.4548,-6.92369,0 1/1:38:0,38:0:0:38:1236:-111.526,-11.4391,0 dDocent_Contig_3556 34 . C G 80.5047 . AB=0.0923077;ABP=472.215;AC=2;AF=0.166667;AN=12;AO=93;CIGAR=1X;DP=1291;DPB=1291;DPRA=0;EPP=204.957;EPPR=2600.09;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.150538;PAIREDR=0.120401;PAO=0;PQA=0;PQR=0;PRO=0;QA=3663;QR=47604;RO=1196;RPL=0;RPP=204.957;RPPR=2600.09;RPR=93;RUN=1;SAF=93;SAP=204.957;SAR=0;SRF=1196;SRP=2600.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:225:215,10:215:8527:10:402:0,-31.1935,-730.409 0/0:275:255,19:255:10158:19:739:0,-16.0371,-846.753 0/0:250:234,16:234:9323:16:628:0,-18.4027,-781.637 0/0:216:197,18:197:7815:18:705:0,-1.34793,-639.191 0/1:153:140,13:140:5599:13:511:-0.278755,0,-457.676 0/1:172:155,17:155:6182:17:678:-9.57195,0,-504.36 dDocent_Contig_3557 122 . G T 1181.2 . AB=0.273543;ABP=102.343;AC=4;AF=0.333333;AN=12;AO=63;CIGAR=1X;DP=369;DPB=369;DPRA=1.00984;EPP=139.813;EPPR=667.481;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.968254;PAIREDR=0.964052;PAO=0;PQA=0;PQR=0;PRO=0;QA=2196;QR=11095;RO=306;RPL=0;RPP=139.813;RPPR=667.481;RPR=63;RUN=1;SAF=0;SAP=139.813;SAR=63;SRF=0;SRP=667.481;SRR=306;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:39:25,14:25:895:14:497:-33.3252,0,-69.1238 0/1:62:45,17:45:1635:17:594:-35.1231,0,-128.765 0/1:58:42,16:42:1536:16:561:-33.3604,0,-121.068 0/1:64:50,14:50:1802:14:472:-23.5332,0,-143.188 0/0:61:61,0:61:2193:0:0:0,-18.3628,-197.626 0/0:85:83,2:83:3034:2:72:0,-18.7508,-266.438 dDocent_Contig_3558 90 . T C 58.9886 . AB=0.148936;ABP=53.3238;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1X;DP=487;DPB=487;DPRA=1.56316;EPP=44.2683;EPPR=1019.26;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=606;QR=16029;RO=468;RPL=19;RPP=44.2683;RPPR=1019.26;RPR=0;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=468;SRP=1019.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:119:117,2:117:4023:2:42:0,-31.8339,-358.293 0/0:131:121,10:121:4126:10:328:0,-9.5953,-341.708 0/0:72:72,0:72:2501:0:0:0,-21.6742,-225.353 0/1:47:40,7:40:1361:7:236:-7.42174,0,-108.638 0/0:21:21,0:21:730:0:0:0,-6.32163,-66.0228 0/0:97:97,0:97:3288:0:0:0,-29.1999,-296.152 dDocent_Contig_3559 138 . T A 26114.1 . AB=0.521359;ABP=10.7094;AC=6;AF=0.5;AN=12;AO=1013;CIGAR=1X;DP=1943;DPB=1943;DPRA=0;EPP=2202.71;EPPR=2015.97;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.994077;PAIREDR=0.995685;PAO=0;PQA=0;PQR=0;PRO=0;QA=35626;QR=31588;RO=927;RPL=0;RPP=2202.71;RPPR=2015.97;RPR=1013;RUN=1;SAF=0;SAP=2202.71;SAR=1013;SRF=0;SRP=2015.97;SRR=927;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:240:48,192:48:1589:192:6708:-531.556,0,-71.0444 0/1:372:105,267:105:3534:267:9418:-735.591,0,-206.304 0/1:192:49,143:49:1672:143:5010:-393.234,0,-92.9708 0/1:345:103,242:103:3518:242:8506:-661.68,0,-212.991 0/1:394:353,41:353:12073:41:1441:-11.3743,0,-967.911 0/1:400:269,128:269:9202:128:4543:-289.193,0,-708.383 dDocent_Contig_3560 86 . A C 46.6093 . AB=0.230769;ABP=11.1951;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=281;DPB=281;DPRA=0.601852;EPP=13.8677;EPPR=602.337;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.92029;PAO=0;PQA=0;PQR=0;PRO=0;QA=175;QR=9260;RO=276;RPL=5;RPP=13.8677;RPPR=602.337;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=276;SRP=602.337;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:13:10,3:10:338:3:105:-5.88277,0,-26.834 0/0:95:95,0:95:3158:0:0:0,-28.5978,-284.455 0/0:52:50,2:50:1659:2:70:0,-9.00616,-142.944 0/0:78:78,0:78:2644:0:0:0,-23.4803,-238.217 0/0:12:12,0:12:416:0:0:0,-3.61236,-37.7727 0/0:31:31,0:31:1045:0:0:0,-9.33193,-94.3549 dDocent_Contig_3561 12 . C T 30.4217 . AB=0.136364;ABP=28.2783;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=233;DPB=233;DPRA=0.617978;EPP=11.6962;EPPR=500.277;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=0.5;PAIREDR=0.50655;PAO=0;PQA=0;PQR=0;PRO=0;QA=161;QR=9207;RO=229;RPL=0;RPP=11.6962;RPPR=500.277;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=229;SRP=500.277;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:32,0:32:1292:0:0:0,-9.63296,-116.541 0/0:51:51,0:51:2040:0:0:0,-15.3525,-183.789 0/1:22:19,3:19:771:3:120:-4.56465,0,-63.087 0/0:33:32,1:32:1276:1:41:0,-5.83942,-111.007 0/0:43:43,0:43:1728:0:0:0,-12.9443,-155.738 0/0:52:52,0:52:2100:0:0:0,-15.6536,-189.171 dDocent_Contig_3562 19 . C T 1598.49 . AB=0.187739;ABP=224.06;AC=3;AF=0.25;AN=12;AO=60;CIGAR=1X3M;DP=642;DPB=642;DPRA=1.73166;EPP=133.299;EPPR=1173.43;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.996289;PAO=0;PQA=0;PQR=0;PRO=0;QA=2404;QR=21238;RO=539;RPL=0;RPP=133.299;RPPR=1173.43;RPR=60;RUN=1;SAF=60;SAP=133.299;SAR=0;SRF=539;SRP=1173.43;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:134:108,0,18,8:108:4258:0,18,8:0,719,326:-26.6971,-59.2083,-409.509,0,-350.294,-344.876,-32.3112,-382.613,-323.399,-380.205 0|0:152:136,0,11,5:136:5386:0,11,5:0,445,197:0,-40.9401,-484.221,-4.24217,-447.53,-444.218,-24.7388,-468.016,-431.325,-466.511 0|0:106:100,0,0,6:100:3960:0,0,6:0,0,225:0,-30.103,-356.037,-30.103,-356.037,-356.037,-11.3057,-337.616,-337.616,-335.809 0|1:127:96,0,31,0:96:3767:0,31,0:0,1240,0:-73.6389,-102.538,-412.31,0,-310.17,-300.838,-102.538,-412.31,-310.17,-412.31 0|1:70:46,24,0,0:46:1796:24,0,0:950,0,0:-64.7346,0,-140.793,-78.582,-148.017,-226.206,-78.582,-148.017,-226.206,-226.206 0|0:53:53,0,0,0:53:2071:0,0,0:0,0,0:0,-15.9546,-186.593,-15.9546,-186.593,-186.593,-15.9546,-186.593,-186.593,-186.593 dDocent_Contig_3563 16 . C G 641.317 . AB=0;ABP=0;AC=1;AF=0.0833333;AN=12;AO=35;CIGAR=1X1M1X3M2X;DP=1748;DPB=1748;DPRA=2.0732;EPP=79.0118;EPPR=3477.37;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1364;QR=62959;RO=1600;RPL=0;RPP=79.0118;RPPR=3477.37;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=1600;SRP=3477.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:157:152,5,0:152:5979:5,0:193,0:0,-29.5222,-520.219,-45.7566,-521.724,-537.573 0|0:411:385,18,0:385:15095:18,0:719,0:0,-56.5852,-1292.59,-115.897,-1298.01,-1357.23 0|0:130:125,5,0:125:4924:5,0:201,0:0,-20.6628,-424.635,-37.6287,-426.14,-442.705 0|0:149:149,0,0:149:5851:0,0:0,0:0,-44.8535,-526.461,-44.8535,-526.461,-526.461 0|1:462:401,58,0:401:15788:58,0:2267,0:-65.6546,0,-1281.3,-186.368,-1298.76,-1485.13 0|0:439:388,15,35:388:15322:15,35:584,1364:0,-68.8057,-1325.05,-4.69233,-1217.46,-1254.92 dDocent_Contig_3564 54 . A T 104.487 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=105;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_3565 20 . T C 43.1859 . AB=0.131579;ABP=47.8112;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=249;DPB=249;DPRA=1.41748;EPP=24.725;EPPR=521.992;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.2;PAIREDR=0.502092;PAO=0;PQA=0;PQR=0;PRO=0;QA=390;QR=9403;RO=239;RPL=0;RPP=24.725;RPPR=521.992;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=239;SRP=521.992;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:45:45,0:45:1745:0:0:0,-13.5463,-157.276 0/0:63:61,2:61:2431:2:80:0,-11.3731,-211.349 0/1:38:33,5:33:1308:5:188:-5.84144,0,-106.548 0/0:45:42,3:42:1636:3:122:0,-2.17386,-136.116 0/0:19:19,0:19:752:0:0:0,-5.71957,-68.0004 0/0:39:39,0:39:1531:0:0:0,-11.7402,-138.033 dDocent_Contig_3566 38 . T G 4601.76 . AB=0.263158;ABP=373.303;AC=6;AF=0.5;AN=12;AO=200;CIGAR=2X;DP=760;DPB=760;DPRA=0;EPP=437.305;EPPR=1219.03;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.985;PAIREDR=0.982143;PAO=0;PQA=0;PQR=0;PRO=0;QA=7761;QR=22386;RO=560;RPL=0;RPP=437.305;RPPR=1219.03;RPR=200;RUN=1;SAF=200;SAP=437.305;SAR=0;SRF=560;SRP=1219.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:123:71,52:71:2831:52:2006:-143.738,0,-217.875 0|1:163:129,34:129:5178:34:1318:-69.8322,0,-416.812 0|1:113:95,18:95:3777:18:699:-29.2211,0,-305.93 0|1:129:78,51:78:3121:51:1985:-140.043,0,-242.135 0|1:112:79,33:79:3156:33:1285:-82.2174,0,-250.407 0|1:120:108,12:108:4323:12:468:-6.34582,0,-352.897 dDocent_Contig_3567 87 . C T 560.291 . AB=0.12628;ABP=1069.35;AC=1;AF=0.0833333;AN=12;AO=304;CIGAR=1X;DP=4787;DPB=4787;DPRA=1.15035;EPP=663.138;EPPR=9731.21;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9766;QR=142240;RO=4480;RPL=304;RPP=663.138;RPPR=9731.21;RPR=0;RUN=1;SAF=304;SAP=663.138;SAR=0;SRF=4480;SRP=9731.21;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:709:708,0:708:22535:0:0:0,-213.129,-2027.82 0/0:829:767,61:767:24431:61:1897:0,-78.3322,-2027.49 0/0:692:673,19:673:21492:19:619:0,-152.292,-1878.02 0/0:768:730,37:730:23205:37:1183:0,-124.207,-1981.43 0/1:879:768,111:768:24365:111:3577:-57.552,0,-1927.95 0/0:910:834,76:834:26212:76:2490:0,-49.5778,-2134.37 dDocent_Contig_3568 28 . C T 381.079 . AB=0.258065;ABP=34.5317;AC=1;AF=0.0833333;AN=12;AO=29;CIGAR=1X;DP=1090;DPB=1090;DPRA=0.505747;EPP=65.983;EPPR=2302.6;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1121;QR=42493;RO=1059;RPL=0;RPP=65.983;RPPR=2302.6;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=1059;SRP=2302.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:331:331,0:331:13339:0:0:0,-99.6409,-1199.47 0/0:90:89,0:89:3582:0:0:0,-26.7917,-322.312 0/0:110:110,0:110:4372:0:0:0,-33.1133,-393.406 0/0:339:338,0:338:13573:0:0:0,-101.748,-1220.35 0/0:158:145,13:145:5770:13:477:0,-4.30768,-475.835 0/1:62:46,16:46:1857:16:644:-39.6308,0,-148.668 dDocent_Contig_3569 21 . C A 926.566 . AB=0.215962;ABP=152.271;AC=2;AF=0.166667;AN=12;AO=46;CIGAR=1X;DP=618;DPB=618;DPRA=1.05185;EPP=102.898;EPPR=1245.09;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1771;QR=22847;RO=572;RPL=0;RPP=102.898;RPPR=1245.09;RPR=46;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=572;SRP=1245.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:69:69,0:69:2746:0:0:0,-20.7711,-247.26 0/0:125:125,0:125:4965:0:0:0,-37.6287,-446.735 0/0:109:109,0:109:4382:0:0:0,-32.8123,-394.303 0/0:102:102,0:102:4064:0:0:0,-30.7051,-365.735 0/1:95:66,29:66:2646:29:1124:-72.8518,0,-209.661 0/1:118:101,17:101:4044:17:647:-23.0266,0,-328.42 dDocent_Contig_3570 62 . C T 92.7831 . AB=0.24;ABP=17.6895;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=192;DPB=192;DPRA=0.577181;EPP=18.2106;EPPR=404.733;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.571429;PAIREDR=0.735135;PAO=0;PQA=0;PQR=0;PRO=0;QA=235;QR=6173;RO=185;RPL=0;RPP=18.2106;RPPR=404.733;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=404.733;SRR=185;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:43:43,0:43:1426:0:0:0,-12.9443,-128.629 0/0:44:44,0:44:1459:0:0:0,-13.2453,-131.599 0/0:18:17,1:17:559:1:35:0,-1.91991,-47.1219 0/1:25:19,6:19:651:6:200:-10.8012,0,-51.3861 0/0:39:39,0:39:1309:0:0:0,-11.7402,-118.106 0/0:23:23,0:23:769:0:0:0,-6.92369,-69.5222 dDocent_Contig_3571 26 . C G 222.243 . AB=0.113821;ABP=321.669;AC=2;AF=0.166667;AN=12;AO=31;CIGAR=1X;DP=689;DPB=689;DPRA=1.01762;EPP=70.3259;EPPR=1414.52;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.972644;PAO=0;PQA=0;PQR=0;PRO=0;QA=1220;QR=26123;RO=658;RPL=0;RPP=70.3259;RPPR=1431.84;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=656;SRP=1414.52;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:89:88,1:88:3506:1:40:0,-22.796,-311.577 0/0:79:79,0:79:3085:0:0:0,-23.7814,-277.724 0/0:127:125,2:125:4967:2:82:0,-30.4511,-439.137 0/1:112:99,13:99:3970:13:517:-13.1612,0,-323.567 0/0:148:148,0:148:5814:0:0:0,-44.5524,-523.066 0/1:134:119,15:119:4781:15:581:-12.2849,0,-389.852 dDocent_Contig_3572 98 . N A 93.312 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=2X;DP=3;DPB=8.5;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=100;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:3:0,3:0:0:3:100:-9.33066,-0.90309,0 dDocent_Contig_3573 7 . C T 449.576 . AB=0.0633299;ABP=1624.46;AC=2;AF=0.166667;AN=12;AO=62;CIGAR=2M1X3M;DP=1467;DPB=1452.67;DPRA=1.00307;EPP=137.642;EPPR=2834.61;GTI=0;LEN=1;MEANALT=3.25;MQM=60;MQMR=59.9678;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.972393;PAO=0;PQA=0;PQR=0;PRO=0;QA=2351;QR=50160;RO=1304;RPL=0;RPP=137.642;RPPR=2834.61;RPR=62;RUN=1;SAF=62;SAP=137.642;SAR=0;SRF=1304;SRP=2834.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:237:227,10,0:227:8739:10,0:369,0:0,-38.064,-752.97,-68.3338,-755.981,-785.884 0|0:211:190,19,1:190:7318:19,1:710,38:-0.366414,0,-595.165,-54.4452,-597.768,-655.041 0|0:177:151,23,3:151:5799:23,3:839,105:-22.5322,0,-469.135,-59.4486,-467.519,-534.59 0|0:251:226,22,0:226:8685:22,0:826,0:0,-0.568365,-707.022,-68.0328,-713.644,-781.031 0|1:299:261,6,26:261:10050:6,26:189,1011:-4.56122,-68.2181,-891.378,0,-810.099,-817.193 0|1:292:249,5,32:249:9569:5,32:150,1197:-23.0839,-86.8726,-870.93,0,-774.421,-775.965 dDocent_Contig_3574 8 . C T 361.471 . AB=0.227848;ABP=53.8337;AC=2;AF=0.166667;AN=12;AO=18;CIGAR=1X;DP=253;DPB=253;DPRA=0.908046;EPP=42.0968;EPPR=511.135;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=693;QR=9039;RO=234;RPL=0;RPP=42.0968;RPPR=511.135;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=234;SRP=511.135;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:50,0:50:1938:0:0:0,-15.0515,-174.659 0/0:53:53,0:53:2027:0:0:0,-15.9546,-182.662 0/0:33:32,0:32:1239:0:0:0,-9.63296,-111.413 0/0:38:38,0:38:1468:0:0:0,-11.4391,-132.395 0/1:39:25,14:25:973:14:541:-37.2951,0,-76.1425 0/1:40:36,4:36:1394:4:152:-2.008,0,-113.7 dDocent_Contig_3575 107 . N A 161.847 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=169;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:4:0,4:0:0:4:135:-12.4835,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_3576 57 . G C 99.7865 . AB=0.101523;ABP=274.709;AC=3;AF=0.25;AN=12;AO=24;CIGAR=1X;DP=317;DPB=317;DPRA=1.14894;EPP=55.1256;EPPR=639.252;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=959;QR=11324;RO=293;RPL=24;RPP=55.1256;RPPR=639.252;RPR=0;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=293;SRP=639.252;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:33,2:33:1265:2:79:0,-3.03842,-106.614 0/1:35:32,3:32:1275:3:122:-0.836443,0,-104.487 0/1:114:104,10:104:3967:10:403:-2.31265,0,-322.741 0/1:48:41,7:41:1599:7:277:-10.8494,0,-129.706 0/0:47:47,0:47:1834:0:0:0,-14.1484,-165.283 0/0:38:36,2:36:1384:2:78:0,-4.03567,-117.418 dDocent_Contig_3577 64 . G C 2901.01 . AB=0.319444;ABP=104.949;AC=6;AF=0.5;AN=12;AO=115;CIGAR=1X;DP=360;DPB=360;DPRA=0;EPP=252.73;EPPR=535.021;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.530435;PAIREDR=0.6;PAO=0;PQA=0;PQR=0;PRO=0;QA=4531;QR=9671;RO=245;RPL=115;RPP=252.73;RPPR=535.021;RPR=0;RUN=1;SAF=115;SAP=252.73;SAR=0;SRF=245;SRP=535.021;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:46:34,12:34:1319:12:457:-27.6223,0,-105.131 0/1:64:35,29:35:1394:29:1162:-85.5959,0,-106.454 0/1:47:33,14:33:1293:14:557:-36.3244,0,-102.487 0/1:49:26,23:26:1050:23:888:-65.478,0,-80.0408 0/1:74:45,29:45:1769:29:1169:-83.2125,0,-137.152 0/1:80:72,8:72:2846:8:298:-3.08415,0,-232.171 dDocent_Contig_3578 98 . N T 172.72 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=175;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 dDocent_Contig_3579 1 . N G 263.804 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=275;QR=0;RO=0;RPL=0;RPP=20.3821;RPPR=0;RPR=8;RUN=1;SAF=0;SAP=20.3821;SAR=8;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:136:-12.5758,-1.20412,0 1/1:3:0,3:0:0:3:104:-9.70309,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_3580 9 . G A 127.838 . AB=0.0960784;ABP=725.744;AC=1;AF=0.0833333;AN=12;AO=52;CIGAR=1X;DP=2028;DPB=2028;DPRA=0.639326;EPP=115.927;EPPR=4291.67;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1930;QR=75108;RO=1975;RPL=0;RPP=115.927;RPPR=4291.67;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=1975;SRP=4291.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:91:90,1:90:3397:1:39:0,-23.4972,-301.967 0/0:322:320,1:320:12167:1:10:0,-95.8106,-1093.47 0/0:215:214,1:214:8139:1:19:0,-62.8215,-730.405 0/0:234:234,0:234:8923:0:0:0,-70.441,-802.807 0/0:656:656,0:656:25068:0:0:0,-197.476,-2254.7 0/1:510:461,49:461:17414:49:1862:-14.3067,0,-1412.89 dDocent_Contig_3581 8 . C T 268.471 . AB=0.185185;ABP=72.7387;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=2X;DP=460;DPB=460;DPRA=0.779456;EPP=37.7539;EPPR=962.801;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=618;QR=16848;RO=442;RPL=0;RPP=37.7539;RPPR=962.801;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=442;SRP=962.801;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:81:66,15:66:2489:15:579:-28.069,0,-199.83 0|0:52:50,0:50:1926:0:0:0,-15.0515,-173.236 0|0:37:37,0:37:1418:0:0:0,-11.1381,-127.901 0|0:48:47,1:47:1769:1:39:0,-10.5529,-155.57 0|0:46:46,0:46:1752:0:0:0,-13.8474,-157.937 0|0:196:196,0:196:7494:0:0:0,-59.0019,-674.309 dDocent_Contig_3582 13 . C T 7270.58 . AB=0.294715;ABP=363.192;AC=6;AF=0.5;AN=12;AO=290;CIGAR=1X3M1X;DP=984;DPB=984;DPRA=0;EPP=632.737;EPPR=1486.13;GTI=0;LEN=1;MEANALT=2.5;MQM=57.7966;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.768966;PAIREDR=0.903367;PAO=0;PQA=0;PQR=0;PRO=0;QA=11533;QR=26960;RO=683;RPL=0;RPP=632.737;RPPR=1486.13;RPR=290;RUN=1;SAF=290;SAP=632.737;SAR=0;SRF=683;SRP=1486.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:190:154,33:154:6079:33:1326:-61.417,0,-490.248 0|1:197:157,38:157:6227:38:1489:-73.5798,0,-501.131 0|1:158:117,37:117:4630:37:1492:-87.4087,0,-369.896 0|1:203:124,77:124:4853:77:3046:-212.413,0,-375.797 0|1:95:48,47:48:1894:47:1873:-139.905,0,-142.083 0|1:141:83,58:83:3277:58:2307:-163.557,0,-252.574 dDocent_Contig_3583 7 . C T 280.314 . AB=0.127193;ABP=278.254;AC=3;AF=0.25;AN=12;AO=33;CIGAR=1X;DP=452;DPB=452;DPRA=0.793407;EPP=74.6689;EPPR=908.514;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.990408;PAO=0;PQA=0;PQR=0;PRO=0;QA=1269;QR=15869;RO=417;RPL=0;RPP=74.6689;RPPR=908.514;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=417;SRP=908.514;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:58:52,6:52:1987:6:232:-3.78932,0,-161.609 0/1:94:81,11:81:3064:11:424:-10.5908,0,-248.024 0/0:47:44,3:44:1681:3:114:0,-3.51619,-140.919 0/1:76:64,12:64:2474:12:460:-18.8719,0,-199.979 0/0:91:91,0:91:3438:0:0:0,-27.3937,-309.554 0/0:86:85,1:85:3225:1:39:0,-21.992,-286.504 dDocent_Contig_3584 8 . C T 350.051 . AB=0.192661;ABP=92.4391;AC=2;AF=0.166667;AN=12;AO=28;CIGAR=1X;DP=313;DPB=313;DPRA=1.3631;EPP=63.8115;EPPR=617.537;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.498233;PAO=0;PQA=0;PQR=0;PRO=0;QA=1049;QR=10864;RO=283;RPL=0;RPP=63.8115;RPPR=617.537;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=283;SRP=617.537;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:43,0:43:1668:0:0:0,-12.9443,-150 0/0:62:58,4:58:2228:4:150:0,-4.79806,-186.876 0/0:40:40,0:40:1539:0:0:0,-12.0412,-138.782 0/0:58:55,3:55:2093:3:117:0,-6.54936,-177.692 0/1:62:49,13:49:1892:13:486:-25.4183,0,-151.86 0/1:47:38,8:38:1444:8:296:-12.8086,0,-116.061 dDocent_Contig_3585 7 . C A 2283.71 . AB=0.181548;ABP=594.943;AC=3;AF=0.25;AN=12;AO=134;CIGAR=1X2M1X;DP=1920;DPB=1920;DPRA=0.583673;EPP=293.988;EPPR=3466.51;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.998746;PAO=0;PQA=0;PQR=0;PRO=0;QA=5048;QR=61098;RO=1595;RPL=0;RPP=293.988;RPPR=3466.51;RPR=134;RUN=1;SAF=134;SAP=293.988;SAR=0;SRF=1595;SRP=3466.51;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:208:162,26,2,7:162:6194:26,2,7:978,77,281:-31.355,0,-500.412,-73.7996,-501.917,-581.444,-56.9645,-485.084,-558.892,-563.106 0|1:170:111,33,6,14:111:4261:33,6,14:1250,228,545:-69.0776,0,-339.846,-83.7944,-331.083,-431.761,-57.7057,-304.997,-388.785,-403.268 0|0:209:178,4,10,13:178:6827:4,10,13:145,375,510:0,-41.7477,-600.894,-22.8737,-571.386,-580.214,-11.638,-560.16,-541.286,-568.085 0|1:294:203,63,15,7:203:7782:63,15,7:2371,572,272:-133.161,0,-619.744,-147.348,-591.788,-781.546,-171.926,-616.366,-763.718,-808.533 0|0:549:517,8,5,18:517:19779:8,5,18:304,189,713:0,-130.701,-1751.35,-140.14,-1738.26,-1761.69,-96.932,-1695.08,-1704.51,-1714.59 0|0:490:424,0,11,19:424:16255:0,11,19:0,418,761:0,-127.637,-1461.76,-93.3608,-1427.49,-1424.17,-64.9379,-1399.07,-1364.79,-1393.35 dDocent_Contig_3586 63 . C T 176.162 . AB=0.189655;ABP=51.5315;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=201;DPB=201;DPRA=2.51685;EPP=33.4109;EPPR=409.076;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.973262;PAO=0;PQA=0;PQR=0;PRO=0;QA=521;QR=7298;RO=187;RPL=14;RPP=33.4109;RPPR=409.076;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=187;SRP=409.076;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:655:0:0:0,-5.11751,-59.2846 0/0:32:32,0:32:1221:0:0:0,-9.63296,-110.181 0/0:13:13,0:13:518:0:0:0,-3.91339,-46.9652 0/0:27:27,0:27:1036:0:0:0,-8.12781,-93.5279 0/0:54:51,3:51:2002:3:118:0,-5.25311,-169.367 0/1:58:47,11:47:1866:11:403:-19.1391,0,-150.692 dDocent_Contig_3588 43 . T C 226.727 . AB=0.243902;ABP=26.3669;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=250;DPB=250;DPRA=0.941176;EPP=31.2394;EPPR=517.649;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.769231;PAIREDR=0.71308;PAO=0;PQA=0;PQR=0;PRO=0;QA=524;QR=9529;RO=237;RPL=0;RPP=31.2394;RPPR=517.649;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=237;SRP=517.649;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:45:45,0:45:1810:0:0:0,-13.5463,-163.111 0/0:42:42,0:42:1691:0:0:0,-12.6433,-152.412 0/0:32:32,0:32:1299:0:0:0,-9.63296,-117.169 0/0:51:51,0:51:2029:0:0:0,-15.3525,-182.799 0/0:39:36,3:36:1450:3:122:0,-0.367677,-119.376 0/1:41:31,10:31:1250:10:402:-24.1953,0,-100.425 dDocent_Contig_3589 20 . A C 1502.63 . AB=0.402878;ABP=14.3988;AC=6;AF=0.5;AN=12;AO=56;CIGAR=1X;DP=139;DPB=139;DPRA=0;EPP=124.613;EPPR=183.243;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.857143;PAIREDR=0.807229;PAO=0;PQA=0;PQR=0;PRO=0;QA=2235;QR=3297;RO=83;RPL=0;RPP=124.613;RPPR=183.243;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=83;SRP=183.243;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:17,9:17:678:9:366:-25.4784,0,-53.5234 0/1:45:25,20:25:984:20:780:-56.9611,0,-75.3099 0/1:20:9,11:9:363:11:444:-34.2946,0,-27.0126 0/1:15:10,5:10:398:5:204:-14.2286,0,-31.6604 0/1:17:8,9:8:325:9:359:-27.5513,0,-24.5019 0/1:16:14,2:14:549:2:82:-2.9632,0,-44.9294 dDocent_Contig_3590 8 . C T 479.352 . AB=0.125;ABP=530.678;AC=4;AF=0.333333;AN=12;AO=54;CIGAR=1X;DP=621;DPB=621;DPRA=1.14286;EPP=120.27;EPPR=1234.24;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2042;QR=21812;RO=567;RPL=0;RPP=120.27;RPPR=1234.24;RPR=54;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=567;SRP=1234.24;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:36,0:36:1358:0:0:0,-10.8371,-122.5 0/1:92:72,20:72:2751:20:765:-41.4828,0,-220.082 0/1:104:92,12:92:3570:12:434:-8.08944,0,-290.107 0/1:48:43,5:43:1652:5:194:-3.3834,0,-134.493 0/0:153:153,0:153:5896:0:0:0,-46.0576,-530.582 0/1:188:171,17:171:6585:17:649:-2.15044,0,-535.947 dDocent_Contig_3591 30 . G A 321.323 . AB=0.304348;ABP=18.305;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=285;DPB=285;DPRA=0.374233;EPP=39.9253;EPPR=582.793;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=659;QR=10587;RO=267;RPL=0;RPP=39.9253;RPPR=582.793;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=267;SRP=582.793;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:14,10:14:569:10:383:-27.5948,0,-44.3278 0/0:50:49,1:49:1948:1:41:0,-10.9569,-171.424 0/1:22:17,4:17:670:4:154:-7.75887,0,-54.2045 0/0:26:24,2:24:955:2:81:0,-0.141046,-78.5649 0/0:112:112,0:112:4472:0:0:0,-33.7154,-402.407 0/0:51:51,0:51:1973:0:0:0,-15.3525,-177.772 dDocent_Contig_3592 11 . C T 47817.7 . AB=0.186143;ABP=830.391;AC=0;AF=0;AN=12;AO=180;CIGAR=1M1X4M1X2M1X1M;DP=2740;DPB=2627.82;DPRA=0;EPP=393.875;EPPR=1394.92;GTI=0;LEN=1;MEANALT=8.5;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=4.44089e-16;PAIRED=1;PAIREDR=0.99532;PAO=0;PQA=0;PQR=0;PRO=0;QA=6644;QR=24900;RO=641;RPL=0;RPP=393.875;RPPR=1394.92;RPR=180;RUN=1;SAF=180;SAP=393.875;SAR=0;SRF=641;SRP=1394.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:380:97,0,33,0,237,0:97:3827:0,33,0,237,0:0,1165,0,9330,0:-738.258,-767.458,-1082.35,-672.614,-987.501,-977.567,-767.458,-1082.35,-987.501,-1082.35,0,-314.913,-220.074,-314.913,-243.569,-767.458,-1082.35,-987.501,-1082.35,-314.913,-1082.35 0|0:529:122,0,25,0,367,0:122:4719:0,25,0,367,0:0,908,0,14508,0:-1157.12,-1193.85,-1581.44,-1119.71,-1507.3,-1499.77,-1193.85,-1581.44,-1507.3,-1581.44,0,-387.609,-313.471,-387.609,-277.131,-1193.85,-1581.44,-1507.3,-1581.44,-387.609,-1581.44 0|0:393:112,0,45,0,201,0:112:4362:0,45,0,201,0:0,1636,0,7962,0:-621.581,-655.297,-1013.78,-521.71,-880.196,-866.65,-655.297,-1013.78,-880.196,-1013.78,0,-358.498,-224.912,-358.498,-297.991,-655.297,-1013.78,-880.196,-1013.78,-358.498,-1013.78 0|0:471:110,0,29,0,291,0:110:4267:0,29,0,291,0:0,1100,0,11522,0:-915.15,-948.264,-1298.82,-858.069,-1208.63,-1199.9,-948.264,-1298.82,-1208.63,-1298.82,0,-350.572,-260.376,-350.572,-262.972,-948.264,-1298.82,-1208.63,-1298.82,-350.572,-1298.82 0|0:505:94,82,0,0,274,52:94:3623:82,0,0,274,52:2988,0,0,10867,2065:-866.189,-650.432,-923.221,-894.486,-947.905,-1191.96,-894.486,-947.905,-1191.96,-1191.96,0,-53.4281,-297.481,-297.481,-214.999,-724.498,-777.918,-1021.97,-1021.97,-127.489,-1006.32 0|0:462:106,98,0,64,162,18:106:4102:98,0,64,162,18:3656,0,2532,6400,721:-494.69,-227.293,-534.718,-526.599,-564.219,-863.527,-318.227,-355.848,-655.155,-635.89,0,-37.6228,-336.93,-128.556,-288.163,-467.201,-504.821,-804.129,-595.757,-277.531,-798.71 dDocent_Contig_3593 8 . C T 1035.1 . AB=0.15625;ABP=462.82;AC=2;AF=0.166667;AN=12;AO=108;CIGAR=1X;DP=1477;DPB=1477;DPRA=1.00407;EPP=237.529;EPPR=2975.76;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4138;QR=52360;RO=1369;RPL=0;RPP=237.529;RPPR=2975.76;RPR=108;RUN=1;SAF=108;SAP=237.529;SAR=0;SRF=1369;SRP=2975.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:127:127,0:127:4846:0:0:0,-38.2308,-436.172 0/0:346:324,22:324:12360:22:841:0,-28.1441,-1035.87 0/1:204:171,33:171:6568:33:1269:-53.0909,0,-529.608 0/1:244:207,37:207:7927:37:1409:-53.6409,0,-639.786 0/0:364:364,0:364:13919:0:0:0,-109.575,-1252.09 0/0:192:176,16:176:6740:16:619:0,-1.74764,-550.446 dDocent_Contig_3594 12 . A T 17600.9 . AB=0.272006;ABP=1198.14;AC=5;AF=0.416667;AN=12;AO=746;CIGAR=1X;DP=2955;DPB=2955;DPRA=0;EPP=1622.93;EPPR=4791.11;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.995979;PAIREDR=0.945125;PAO=0;PQA=0;PQR=0;PRO=0;QA=29540;QR=87288;RO=2205;RPL=0;RPP=1622.93;RPPR=4791.11;RPR=746;RUN=1;SAF=746;SAP=1622.93;SAR=0;SRF=2205;SRP=4791.11;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:402:252,150:252:10032:150:5933:-412.747,0,-781.239 0/1:255:231,24:231:9174:24:932:-7.42334,0,-748.371 0/1:206:128,78:128:5103:78:3101:-217.159,0,-397.131 0/0:308:282,26:282:11152:26:1024:0,-0.264292,-910.497 0/1:1050:763,285:763:30146:285:11313:-701.695,0,-2394.77 0/1:734:549,183:549:21681:183:7237:-430.289,0,-1728.8 dDocent_Contig_3595 189 . T A 1513.83 . AB=0.24812;ABP=149.593;AC=4;AF=0.333333;AN=12;AO=66;CIGAR=1X;DP=358;DPB=358;DPRA=1.44565;EPP=146.327;EPPR=637.08;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2637;QR=11632;RO=292;RPL=66;RPP=146.327;RPPR=637.08;RPR=0;RUN=1;SAF=0;SAP=146.327;SAR=66;SRF=0;SRP=637.08;SRR=292;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:63:43,20:43:1707:20:786:-52.0898,0,-134.879 0/1:115:83,32:83:3264:32:1290:-81.7464,0,-259.192 0/1:34:25,9:25:999:9:358:-22.3428,0,-79.9703 0/1:54:49,5:49:1950:5:203:-2.39744,0,-159.446 0/0:27:27,0:27:1090:0:0:0,-8.12781,-98.3863 0/0:65:65,0:65:2622:0:0:0,-19.5669,-236.097 dDocent_Contig_3596 27 . C T 1457.51 . AB=0.335329;ABP=42.3439;AC=4;AF=0.333333;AN=12;AO=56;CIGAR=1X;DP=215;DPB=215;DPRA=1.73958;EPP=124.613;EPPR=348.274;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.517857;PAIREDR=0.522013;PAO=0;PQA=0;PQR=0;PRO=0;QA=2243;QR=6282;RO=159;RPL=0;RPP=124.613;RPPR=348.274;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=159;SRP=348.274;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:32,6:32:1246:6:242:-10.7178,0,-100.967 0/1:47:42,5:42:1676:5:205:-4.6866,0,-136.919 0/0:21:21,0:21:819:0:0:0,-6.32163,-74.0184 0/0:27:27,0:27:1069:0:0:0,-8.12781,-96.4968 0/1:52:25,27:25:993:27:1065:-80.4854,0,-74.016 0/1:30:12,18:12:479:18:731:-57.0829,0,-34.427 dDocent_Contig_3597 13 . T A 10713.5 . AB=0.163569;ABP=3705.44;AC=5;AF=0.416667;AN=12;AO=630;CIGAR=2X;DP=4757;DPB=4757;DPRA=0;EPP=1371.04;EPPR=8723.64;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=25051;QR=160238;RO=4016;RPL=0;RPP=1371.04;RPPR=8723.64;RPR=630;RUN=1;SAF=630;SAP=1371.04;SAR=0;SRF=4016;SRP=8723.64;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:785:654,130,1:654:26095:130,1:5199,36:-231.413,0,-2109.91,-425.35,-2146.11,-2574.06 0|1:795:655,139,0:655:26150:139,0:5468,0:-252.556,0,-2111.81,-449.73,-2153.65,-2603.39 0|1:693:606,87,0:606:24214:87,0:3460,0:-102.826,0,-1968.52,-285.25,-1994.71,-2279.56 0|1:600:453,145,1:453:18024:145,1:5778,41:-339.407,0,-1440.32,-472.389,-1480.58,-1956.07 0|0:991:909,14,67:909:36247:14,67:569,2655:0,-226.703,-3207.4,-55.1352,-2993.1,-3019.86 0|1:893:739,115,39:739:29508:115,39:4577,1563:-154.373,0,-2395.6,-248.07,-2301.46,-2666.55 dDocent_Contig_3599 32 . C T 903.625 . AB=0.225806;ABP=124.473;AC=2;AF=0.166667;AN=12;AO=65;CIGAR=1X;DP=849;DPB=849;DPRA=0.874684;EPP=144.156;EPPR=1703.27;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.7433;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.795658;PAO=0;PQA=0;PQR=0;PRO=0;QA=2561;QR=31135;RO=783;RPL=0;RPP=144.156;RPPR=1703.27;RPR=65;RUN=1;SAF=65;SAP=144.156;SAR=0;SRF=783;SRP=1703.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:118:108,10:108:4276:10:383:0,-0.702378,-347.475 0/0:230:223,7:223:8878:7:281:0,-43.5758,-769.971 0/0:157:151,6:151:6007:6:242:0,-25.1048,-515.644 0/0:158:157,0:157:6285:0:0:0,-47.2617,-565.014 0/1:100:68,32:68:2713:32:1261:-83.658,0,-211.033 0/1:86:76,10:76:2976:10:394:-9.92623,0,-242.054 dDocent_Contig_3600 98 . N A 3692 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=139;CIGAR=1X;DP=139;DPB=139;DPRA=0;EPP=304.845;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4075;QR=0;RO=0;RPL=139;RPP=304.845;RPPR=0;RPR=0;RUN=1;SAF=139;SAP=304.845;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:95:-8.86438,-0.90309,0 1/1:19:0,19:0:0:19:561:-50.7713,-5.71957,0 1/1:13:0,13:0:0:13:380:-34.4828,-3.91339,0 1/1:21:0,21:0:0:21:652:-58.9735,-6.32163,0 1/1:31:0,31:0:0:31:763:-68.9019,-9.33193,0 1/1:52:0,52:0:0:52:1624:-146.428,-15.6536,0 dDocent_Contig_3601 98 . N A 99.6983 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=100;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:66:-6.26818,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_3602 98 . N C 294.317 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=309;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:172:-15.8185,-1.50515,0 dDocent_Contig_3603 49 . C G 635.583 . AB=0.106095;ABP=1197.08;AC=1;AF=0.0833333;AN=12;AO=137;CIGAR=1X;DP=5670;DPB=5670;DPRA=1.20623;EPP=300.502;EPPR=9916.41;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999277;PAO=0;PQA=0;PQR=0;PRO=0;QA=5394;QR=218717;RO=5531;RPL=0;RPP=300.502;RPPR=9916.41;RPR=137;RUN=1;SAF=137;SAP=300.502;SAR=0;SRF=5531;SRP=12013.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:929:929,0:929:36606:0:0:0,-279.657,-3291.23 0/0:1018:1017,1:1017:40201:1:39:0,-302.552,-3610.49 0/0:747:747,0:747:29467:0:0:0,-224.869,-2649.4 0/0:894:893,0:893:35227:0:0:0,-268.82,-3166.82 0/0:1196:1153,42:1153:45709:42:1669:0,-209.38,-3959.12 0/1:886:792,94:792:31507:94:3686:-65.0812,0,-2566.05 dDocent_Contig_3604 24 . C T 519.374 . AB=0.228571;ABP=70.2019;AC=3;AF=0.25;AN=12;AO=24;CIGAR=1X;DP=204;DPB=204;DPRA=1.06061;EPP=55.1256;EPPR=393.875;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.677778;PAO=0;PQA=0;PQR=0;PRO=0;QA=974;QR=7227;RO=180;RPL=0;RPP=55.1256;RPPR=393.875;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=180;SRP=393.875;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:36,0:36:1450:0:0:0,-10.8371,-130.747 0/1:39:32,7:32:1292:7:284:-14.1932,0,-104.803 0/1:28:21,7:21:852:7:285:-17.5956,0,-68.5616 0/1:38:28,10:28:1120:10:405:-25.3704,0,-89.6441 0/0:26:26,0:26:1028:0:0:0,-7.82678,-92.8076 0/0:37:37,0:37:1485:0:0:0,-11.1381,-133.892 dDocent_Contig_3606 28 . C T 98.9508 . AB=0.126761;ABP=88.9211;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=692;DPB=692;DPRA=1.11011;EPP=24.725;EPPR=1483.95;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.941349;PAO=0;PQA=0;PQR=0;PRO=0;QA=397;QR=27265;RO=682;RPL=0;RPP=24.725;RPPR=1483.95;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=682;SRP=1483.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:71:62,9:62:2449:9:357:-11.1169,0,-199.189 0/0:112:112,0:112:4483:0:0:0,-33.7154,-403.399 0/0:31:31,0:31:1262:0:0:0,-9.33193,-113.843 0/0:29:29,0:29:1134:0:0:0,-8.72987,-102.338 0/0:273:273,0:273:10936:0:0:0,-82.1812,-983.475 0/0:176:175,1:175:7001:1:40:0,-48.9856,-625.757 dDocent_Contig_3607 22 . T C 73593.2 . AB=0.805979;ABP=1444.81;AC=8;AF=0.666667;AN=12;AO=2294;CIGAR=1X;DP=2698;DPB=2698;DPRA=0;EPP=4984.37;EPPR=871.599;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999564;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=90179;QR=15660;RO=400;RPL=0;RPP=4984.37;RPPR=871.599;RPR=2294;RUN=1;SAF=2294;SAP=4984.37;SAR=0;SRF=400;SRP=871.599;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:368:74,293:74:2887:293:11560:-928.838,0,-149.1 0/1:487:76,410:76:2974:410:16144:-1305.42,0,-121.382 0/1:494:78,415:78:3076:415:16282:-1315.76,0,-128.436 0/1:424:113,311:113:4395:311:12239:-973.101,0,-267.908 1/1:527:30,497:30:1174:497:19457:-1643.78,-52.7004,0 1/1:398:29,368:29:1154:368:14497:-1199.63,-15.762,0 dDocent_Contig_3608 107 . N C 2574.92 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=85;CIGAR=1X;DP=85;DPB=85;DPRA=0;EPP=187.585;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2835;QR=0;RO=0;RPL=0;RPP=187.585;RPPR=0;RPR=85;RUN=1;SAF=0;SAP=187.585;SAR=85;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 1/1:2:0,2:0:0:2:60:-5.69915,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:68:-6.45788,-0.60206,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:78:0,78:0:0:78:2604:-234.61,-23.4803,0 dDocent_Contig_3609 18 . T C 4575.43 . AB=0.228729;ABP=581.464;AC=6;AF=0.5;AN=12;AO=207;CIGAR=1X;DP=905;DPB=905;DPRA=0;EPP=452.505;EPPR=1516.53;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8196;QR=26176;RO=697;RPL=0;RPP=452.505;RPPR=1516.53;RPR=207;RUN=1;SAF=207;SAP=452.505;SAR=0;SRF=697;SRP=1516.53;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:141:99,42:99:3709:42:1701:-110.863,0,-291.477 0/1:151:107,44:107:4044:44:1750:-112.263,0,-318.597 0/1:100:59,41:59:2282:41:1553:-109.892,0,-175.48 0/1:116:96,20:96:3574:20:811:-38.3855,0,-286.854 0/1:223:203,19:203:7526:19:742:-0.158853,0,-610.274 0/1:174:133,41:133:5041:41:1639:-95.3609,0,-401.324 dDocent_Contig_3610 43 . G C 3213.77 . AB=0.465986;ABP=5.96468;AC=6;AF=0.5;AN=12;AO=137;CIGAR=1X1M1X;DP=294;DPB=294;DPRA=0;EPP=300.502;EPPR=339.589;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.00729927;PAIREDR=0.548387;PAO=0;PQA=0;PQR=0;PRO=0;QA=4656;QR=5133;RO=155;RPL=0;RPP=300.502;RPPR=339.589;RPR=137;RUN=1;SAF=0;SAP=300.502;SAR=137;SRF=0;SRP=339.589;SRR=155;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:52:21,31:21:677:31:1040:-78.2507,0,-45.5823 0|1:52:32,20:32:1053:20:688:-46.5884,0,-79.4178 0|1:55:34,21:34:1119:21:711:-47.7481,0,-84.4521 0|1:53:23,30:23:777:30:1016:-75.7932,0,-54.291 0|1:39:23,15:23:772:15:512:-34.8793,0,-58.2736 0|1:43:22,20:22:735:20:689:-49.3395,0,-53.4719 dDocent_Contig_3611 34 . C A 1631.7 . AB=0.183544;ABP=415.315;AC=3;AF=0.25;AN=12;AO=99;CIGAR=1X;DP=1081;DPB=1081;DPRA=0.748246;EPP=217.986;EPPR=2135.4;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3926;QR=38790;RO=982;RPL=0;RPP=217.986;RPPR=2135.4;RPR=99;RUN=1;SAF=99;SAP=217.986;SAR=0;SRF=982;SRP=2135.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:161:132,29:132:5220:29:1137:-54.1493,0,-421.2 0/1:195:151,44:151:6016:44:1748:-98.8417,0,-482.526 0/0:151:140,11:140:5552:11:438:0,-5.681,-459.735 0/1:118:104,14:104:4124:14:562:-15.4008,0,-335.629 0/0:228:228,0:228:8982:0:0:0,-68.6348,-807.886 0/0:228:227,1:227:8896:1:41:0,-64.5403,-796.059 dDocent_Contig_3612 14 . T G 120207 . AB=0.775369;ABP=2281.22;AC=8;AF=0.666667;AN=12;AO=3781;CIGAR=1X;DP=4610;DPB=4610;DPRA=0;EPP=8213.35;EPPR=1796.65;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999736;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=147405;QR=32500;RO=826;RPL=0;RPP=8213.35;RPPR=1796.65;RPR=3781;RUN=1;SAF=3781;SAP=8213.35;SAR=0;SRF=826;SRP=1796.65;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:675:16,659:16:629:659:25675:-2251.85,-146.252,0 0/1:798:82,716:82:3220:716:27838:-2263.07,0,-49.6537 1/1:476:36,440:36:1434:440:17245:-1421.51,-13.9744,0 0/1:711:76,634:76:2977:634:24760:-2012.4,0,-53.9026 0/1:993:326,665:326:12790:665:26027:-2041.68,0,-851.547 0/1:957:290,667:290:11450:667:25860:-2037.37,0,-741.695 dDocent_Contig_3613 45 . A T 112.238 . AB=0.166667;ABP=43.5445;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=214;DPB=214;DPRA=1.19841;EPP=29.068;EPPR=439.476;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=474;QR=7991;RO=201;RPL=0;RPP=29.068;RPPR=439.476;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=201;SRP=439.476;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:16,1:16:630:1:41:0,-1.02294,-52.9396 0/0:34:34,0:34:1331:0:0:0,-10.235,-120.045 0/0:69:66,3:66:2653:3:120:0,-9.58376,-227.704 0/0:29:29,0:29:1147:0:0:0,-8.72987,-103.513 0/0:23:21,1:21:848:1:35:0,-3.49875,-73.1081 0/1:42:35,7:35:1382:7:278:-12.7466,0,-112.002 dDocent_Contig_3614 13 . T G 42.4748 . AB=0.102941;ABP=96.1281;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=8M1X3M;DP=640;DPB=638.083;DPRA=1.07792;EPP=35.5824;EPPR=1277.72;GTI=0;LEN=1;MEANALT=2.66667;MQM=46.0667;MQMR=59.5697;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0.858824;PAO=0;PQA=0;PQR=0;PRO=0;QA=614;QR=23165;RO=595;RPL=0;RPP=35.5824;RPPR=1295.04;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=593;SRP=1277.72;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:85:81,0,1,0:81:3152:0,1,0:0,39,0:0,-24.3834,-279.696,-21.1568,-276.49,-276.189,-24.3834,-279.696,-276.49,-279.696 0|0:143:140,0,0,1:140:5466:0,0,1:0,0,41:0,-42.1442,-491.069,-42.1442,-491.069,-491.069,-38.725,-487.704,-487.704,-487.403 0|1:68:56,0,4,7:56:2181:0,4,7:0,149,287:-5.77033,-22.628,-201.884,-10.4368,-189.69,-188.486,0,-179.272,-167.078,-177.165 0|0:126:115,4,6,0:115:4497:4,6,0:162,233,0:0,-21.2484,-389.805,-15.4462,-371.864,-383.406,-34.6184,-391.009,-385.212,-404.358 0|0:97:92,5,0,0:92:3580:5,0,0:187,0,0:0,-12.0125,-305.107,-27.6948,-306.612,-321.92,-27.6948,-306.612,-321.92,-321.92 0|0:121:111,3,0,7:111:4289:3,0,7:122,0,286:0,-23.3484,-374.691,-33.4143,-375.594,-385.658,-10.4989,-352.672,-362.736,-360.628 dDocent_Contig_3615 16 . C T 660.996 . AB=0.151943;ABP=300.794;AC=2;AF=0.166667;AN=12;AO=76;CIGAR=1X;DP=951;DPB=951;DPRA=0;EPP=168.042;EPPR=1864.12;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0.920962;PAO=0;PQA=0;PQR=0;PRO=0;QA=3001;QR=34126;RO=873;RPL=0;RPP=168.042;RPPR=1898.71;RPR=76;RUN=1;SAF=76;SAP=168.042;SAR=0;SRF=869;SRP=1864.12;SRR=4;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:148:136,12:136:5278:12:468:0,-2.08489,-432.447 0/1:172:144,28:144:5606:28:1125:-49.7542,0,-452.627 0/0:147:144,3:144:5678:3:122:0,-32.8789,-499.489 0/1:111:96,15:96:3819:15:585:-19.5673,0,-310.318 0/0:181:176,3:176:6891:3:115:0,-43.4355,-609.268 0/0:192:177,15:177:6854:15:586:0,-4.72443,-563.558 dDocent_Contig_3616 8 . C G 933.542 . AB=0.192727;ABP=228.535;AC=4;AF=0.333333;AN=12;AO=53;CIGAR=1X;DP=395;DPB=395;DPRA=1.14583;EPP=118.098;EPPR=745.654;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.641509;PAIREDR=0.459064;PAO=0;PQA=0;PQR=0;PRO=0;QA=2022;QR=13106;RO=342;RPL=0;RPP=118.098;RPPR=745.654;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=342;SRP=745.654;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:70:62,8:62:2366:8:302:-6.4637,0,-192.079 0/1:69:62,7:62:2387:7:267:-3.62072,0,-194.267 0/1:59:50,9:50:1903:9:348:-13.9195,0,-153.755 0/1:77:48,29:48:1845:29:1105:-76.5703,0,-143.122 0/0:46:46,0:46:1764:0:0:0,-13.8474,-159.017 0/0:74:74,0:74:2841:0:0:0,-22.2762,-255.866 dDocent_Contig_3617 4 . T A 436.586 . AB=0.193798;ABP=108.066;AC=1;AF=0.0833333;AN=12;AO=32;CIGAR=1X1M1D1X8M;DP=591;DPB=587.917;DPRA=1.63692;EPP=72.4974;EPPR=1199.49;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1183;QR=21212;RO=551;RPL=0;RPP=72.4974;RPPR=1199.49;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=551;SRP=1199.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:32:30,0,2:30:1142:0,2:0,77:0,-9.0309,-102.692,-2.32382,-96.3695,-95.7675 0|1:129:101,25,0:101:3892:25,0:924,0:-45.1814,0,-312.078,-75.5855,-319.604,-395.187 0|0:63:63,0,0:63:2431:0,0:0,0:0,-18.9649,-218.994,-18.9649,-218.994,-218.994 0|0:137:130,7,0:130:5019:7,0:259,0:0,-17.575,-428.056,-39.1339,-430.163,-451.352 0|0:84:83,0,0:83:3194:0,0:0,0:0,-24.9855,-287.2,-24.9855,-287.2,-287.2 0|0:146:144,0,0:144:5534:0,0:0,0:0,-43.3483,-497.64,-43.3483,-497.64,-497.64 dDocent_Contig_3618 12 . A C 1948.16 . AB=0.105469;ABP=349.123;AC=1;AF=0.0833333;AN=12;AO=46;CIGAR=7M1X1M;DP=1083;DPB=1033.56;DPRA=0;EPP=102.898;EPPR=1920.42;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1855;QR=33943;RO=883;RPL=0;RPP=102.898;RPPR=1920.42;RPR=46;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=883;SRP=1920.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:228:208,12,6:208:7980:12,6:435,235:0,-27.1099,-678.498,-43.2865,-662.791,-696.501 0|1:256:205,16,27:205:7863:16,27:549,1091:-28.2603,-45.5284,-686.086,0,-600.957,-637.286 0|0:79:62,16,0:62:2399:16,0:586,0:-29.2081,0,-192.245,-47.8719,-197.062,-244.952 0|0:209:179,14,13:179:6905:14,13:505,529:0,-12.6901,-575.514,-10.2281,-536.09,-573.387 0|0:185:134,46,0:134:5151:46,0:1647,0:-93.8376,0,-409.067,-134.176,-422.914,-557.066 0|0:126:95,28,0:95:3645:28,0:976,0:-50.732,0,-290.813,-79.3299,-299.242,-378.545 dDocent_Contig_3619 105 . N T 4694.61 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=159;CIGAR=2X;DP=159;DPB=159;DPRA=0;EPP=348.274;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5191;QR=0;RO=0;RPL=0;RPP=348.274;RPPR=0;RPR=159;RUN=1;SAF=0;SAP=348.274;SAR=159;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:13:0,13:0:0:13:433:-39.2914,-3.91339,0 1|1:26:0,26:0:0:26:811:-73.2833,-7.82678,0 1|1:47:0,47:0:0:47:1535:-138.435,-14.1484,0 1|1:52:0,52:0:0:52:1731:-156.076,-15.6536,0 .:.:.:.:.:.:.:. 1|1:21:0,21:0:0:21:681:-61.5968,-6.32163,0 dDocent_Contig_3622 107 . N T 53.2044 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=56;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:56:-5.31935,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_3623 80 . T C 11348.1 . AB=0.232584;ABP=1661.45;AC=3;AF=0.25;AN=12;AO=768;CIGAR=1M1D1M1X;DP=4962;DPB=4769.5;DPRA=0;EPP=1670.7;EPPR=9051.54;GTI=0;LEN=1;MEANALT=4.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=1;PAIREDR=0.99976;PAO=0;PQA=0;PQR=0;PRO=0;QA=26635;QR=146194;RO=4167;RPL=768;RPP=1670.7;RPPR=9051.54;RPR=0;RUN=1;SAF=768;SAP=1670.7;SAR=0;SRF=4167;SRP=9051.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:696:669,27:669:23488:27:953:0,-123.43,-2027.28 0|0:911:821,84:821:28815:84:2917:0,-9.88485,-2329.84 0|0:685:646,36:646:22807:36:1222:0,-95.3603,-1941.81 0|1:724:646,75:646:22496:75:2611:-17.9419,0,-1806.85 0|1:1003:706,287:706:24780:287:9984:-599.352,0,-1930.41 0|1:943:679,259:679:23808:259:8948:-522.74,0,-1859.55 dDocent_Contig_3624 98 . N G 307.612 . AB=0;ABP=0;AC=10;AF=0.833333;AN=12;AO=12;CIGAR=1X;DP=13;DPB=13;DPRA=2.4;EPP=29.068;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=318;QR=0;RO=0;RPL=12;RPP=29.068;RPPR=0;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:67:-6.36304,-0.60206,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:1:0,1:0:0:1:15:-1.49999,-0.30103,0 0/0:1:0,0:0:0:0:0:0,0,0 1/1:4:0,4:0:0:4:105:-9.71009,-1.20412,0 1/1:3:0,3:0:0:3:61:-5.69228,-0.90309,0 dDocent_Contig_3625 51 . A G 405.457 . AB=0.126374;ABP=444.368;AC=3;AF=0.25;AN=12;AO=67;CIGAR=1X;DP=731;DPB=731;DPRA=0;EPP=148.499;EPPR=1442.7;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2555;QR=25439;RO=663;RPL=67;RPP=148.499;RPPR=1442.7;RPR=0;RUN=1;SAF=67;SAP=148.499;SAR=0;SRF=663;SRP=1442.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:95:84,11:84:3162:11:410:-8.64697,0,-256.143 0/0:96:94,2:94:3531:2:78:0,-21.4954,-310.531 0/0:123:113,10:113:4412:10:397:0,-0.939502,-360.958 0/1:100:89,11:89:3483:11:418:-7.85603,0,-283.432 0/1:169:144,24:144:5411:24:888:-29.2645,0,-436.03 0/0:148:139,9:139:5440:9:364:0,-11.4281,-456.341 dDocent_Contig_3626 98 . N T 297.591 . AB=0;ABP=0;AC=10;AF=0.833333;AN=12;AO=14;CIGAR=1X;DP=15;DPB=15;DPRA=2.8;EPP=33.4109;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=310;QR=0;RO=0;RPL=14;RPP=33.4109;RPPR=0;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:36:-3.41967,-0.60206,0 0/0:1:0,0:0:0:0:0:0,0,0 1/1:1:0,1:0:0:1:10:-0.999996,-0.30103,0 1/1:4:0,4:0:0:4:81:-7.49184,-1.20412,0 1/1:3:0,3:0:0:3:83:-7.7459,-0.90309,0 1/1:4:0,4:0:0:4:100:-9.24921,-1.20412,0 dDocent_Contig_3627 15 . A T 423.414 . AB=0.144279;ABP=223.928;AC=2;AF=0.166667;AN=12;AO=29;CIGAR=1X;DP=577;DPB=577;DPRA=1.06915;EPP=65.983;EPPR=1192.98;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.862069;PAIREDR=0.925182;PAO=0;PQA=0;PQR=0;PRO=0;QA=1171;QR=21312;RO=548;RPL=0;RPP=65.983;RPPR=1192.98;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=548;SRP=1192.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:87:87,0:87:3403:0:0:0,-26.1896,-306.36 0/0:119:119,0:119:4560:0:0:0,-35.8226,-410.4 0/0:72:72,0:72:2817:0:0:0,-21.6742,-253.669 0/0:98:98,0:98:3830:0:0:0,-29.5009,-344.743 0/1:90:76,14:76:2926:14:568:-24.3695,0,-236.378 0/1:111:96,15:96:3776:15:603:-21.1938,0,-306.48 dDocent_Contig_3628 79 . A C 310.385 . AB=0.137809;ABP=325.47;AC=3;AF=0.25;AN=12;AO=51;CIGAR=1X;DP=546;DPB=546;DPRA=2.43548;EPP=113.755;EPPR=1077.89;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.99596;PAO=0;PQA=0;PQR=0;PRO=0;QA=1740;QR=16923;RO=495;RPL=51;RPP=113.755;RPPR=1077.89;RPR=0;RUN=1;SAF=51;SAP=113.755;SAR=0;SRF=495;SRP=1077.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:928:0:0:0,-8.12781,-83.8337 0/1:66:59,7:59:2020:7:241:-2.15842,0,-162.208 0/1:63:51,12:51:1751:12:405:-17.81,0,-138.913 0/0:66:66,0:66:2246:0:0:0,-19.868,-202.408 0/0:170:158,12:158:5368:12:402:0,-14.6731,-446.791 0/1:154:134,20:134:4610:20:692:-16.2443,0,-368.736 dDocent_Contig_3629 30 . A G 107.564 . AB=0.115942;ABP=179.812;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=436;DPB=436;DPRA=1.10294;EPP=46.4397;EPPR=906.343;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.7;PAIREDR=0.75;PAO=0;PQA=0;PQR=0;PRO=0;QA=765;QR=16539;RO=416;RPL=0;RPP=46.4397;RPPR=906.343;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=416;SRP=906.343;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:76:66,10:66:2609:10:367:-10.4829,0,-212.066 0/1:62:56,6:56:2228:6:242:-3.49309,0,-182.022 0/0:75:73,2:73:2909:2:74:0,-15.5532,-254.875 0/0:87:85,2:85:3388:2:82:0,-18.4099,-297.183 0/0:71:71,0:71:2828:0:0:0,-21.3731,-254.611 0/0:65:65,0:65:2577:0:0:0,-19.5669,-232.055 dDocent_Contig_3630 117 . A G 68.6279 . AB=0.307692;ABP=7.18621;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=83;DPB=83;DPRA=2.19231;EPP=16.0391;EPPR=170.214;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=198;QR=2641;RO=77;RPL=0;RPP=16.0391;RPPR=170.214;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=170.214;SRR=77;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:13:12,1:12:419:1:35:0,-0.414761,-34.5459 0/0:6:6,0:6:206:0:0:0,-1.80618,-18.8768 0/0:12:12,0:12:412:0:0:0,-3.61236,-37.41 0/0:8:8,0:8:277:0:0:0,-2.40824,-25.2669 0/0:31:30,1:30:1030:1:30:0,-6.33236,-90.0105 0/1:13:9,4:9:297:4:133:-8.38537,0,-23.1369 dDocent_Contig_3631 98 . N A 194.813 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=198;QR=0;RO=0;RPL=7;RPP=18.2106;RPPR=0;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:95:-8.86398,-0.90309,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 1/1:2:0,2:0:0:2:61:-5.79402,-0.60206,0 dDocent_Contig_3632 7 . C G 290.378 . AB=0.229167;ABP=64.1734;AC=2;AF=0.166667;AN=12;AO=29;CIGAR=1X;DP=277;DPB=277;DPRA=1.2987;EPP=65.983;EPPR=541.535;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.896552;PAIREDR=0.947581;PAO=0;PQA=0;PQR=0;PRO=0;QA=889;QR=9518;RO=248;RPL=0;RPP=65.983;RPPR=541.535;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=248;SRP=541.535;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:46,2:46:1760:2:72:0,-7.61307,-151.82 0/0:56:51,5:51:1960:5:144:0,-3.61918,-163.401 0/1:46:37,9:37:1392:9:289:-12.4713,0,-111.713 0/1:50:37,13:37:1427:13:384:-19.7883,0,-113.657 0/0:27:27,0:27:1046:0:0:0,-8.12781,-94.4474 0/0:50:50,0:50:1933:0:0:0,-15.0515,-174.211 dDocent_Contig_3633 45 . T C 22690.2 . AB=0.0504077;ABP=2371.46;AC=0;AF=0;AN=12;AO=68;CIGAR=7M1X3M1X1M;DP=1483;DPB=1488.54;DPRA=0;EPP=150.67;EPPR=1305.95;GTI=0;LEN=1;MEANALT=5.8;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.976974;PAO=0;PQA=0;PQR=0;PRO=0;QA=2645;QR=23694;RO=608;RPL=0;RPP=150.67;RPPR=1323.27;RPR=68;RUN=1;SAF=68;SAP=150.67;SAR=0;SRF=606;SRP=1305.95;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:218:78,0,14,125:78:3000:0,14,125:0,553,4826:-372.799,-396.279,-642.56,-350.772,-597.053,-592.839,0,-246.289,-200.781,-208.66 0|0:239:108,2,2,121:108:4214:2,2,121:63,79,4734:-356.72,-384.165,-729.956,-382.73,-724.057,-728.521,0,-341.368,-339.933,-310.009 0|0:134:36,14,0,82:36:1417:14,0,82:518,0,3252:-256.88,-225.345,-337.699,-267.717,-341.913,-384.285,0,-74.2318,-116.604,-91.9191 0|0:248:85,0,11,147:85:3313:0,11,147:0,423,5842:-455.432,-481.019,-753.323,-446.293,-718.597,-715.285,0,-272.364,-237.636,-228.112 0|0:338:184,0,1,149:184:7178:0,1,149:0,36,5816:-422.794,-478.183,-1068.2,-475.246,-1065.27,-1064.97,0,-590.151,-587.213,-545.297 0|0:306:117,0,40,143:117:4572:0,40,143:0,1554,5493:-415.616,-450.836,-826.707,-323.147,-699.019,-686.978,0,-375.878,-248.19,-332.831 dDocent_Contig_3634 36 . T A 2590.65 . AB=0.135279;ABP=1745.37;AC=5;AF=0.416667;AN=12;AO=226;CIGAR=1X;DP=1922;DPB=1922;DPRA=0;EPP=493.763;EPPR=3683.66;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99882;PAO=0;PQA=0;PQR=0;PRO=0;QA=8844;QR=67513;RO=1695;RPL=0;RPP=493.763;RPPR=3683.66;RPR=226;RUN=1;SAF=226;SAP=493.763;SAR=0;SRF=1695;SRP=3683.66;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:274:223,51:223:8854:51:2022:-99.6935,0,-713.883 0/1:363:329,33:329:13054:33:1259:-4.27219,0,-1064.61 0/1:275:233,42:233:9303:42:1645:-65.4914,0,-753.928 0/1:291:239,52:239:9491:52:2047:-96.8264,0,-766 0/0:414:392,22:392:15701:22:848:0,-47.9925,-1335.2 0/1:305:279,26:279:11110:26:1023:-0.548726,0,-907.349 dDocent_Contig_3635 1 . N G 77.8076 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_3636 30 . T C 249.623 . AB=0.0983607;ABP=772.246;AC=1;AF=0.0833333;AN=12;AO=82;CIGAR=1X3M1D5M;DP=3851;DPB=3842.4;DPRA=0.721764;EPP=181.071;EPPR=8102.6;GTI=0;LEN=1;MEANALT=5.75;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3212;QR=144221;RO=3730;RPL=0;RPP=181.071;RPPR=8102.6;RPR=82;RUN=1;SAF=82;SAP=181.071;SAR=0;SRF=3730;SRP=8102.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:522:508,8:508:19514:8:321:0,-126.415,-1725.9 0|0:654:640,6:640:24772:6:237:0,-173.142,-2206.19 0|1:549:489,54:489:18980:54:2112:-26.4852,0,-1543.24 0|0:550:532,14:532:20537:14:542:0,-115.602,-1797.96 0|0:891:881,0:881:34020:0:0:0,-265.207,-3059.22 0|0:685:680,0:680:26398:0:0:0,-204.7,-2373.67 dDocent_Contig_3637 11 . T C 147409 . AB=0.85887;ABP=3149.72;AC=9;AF=0.75;AN=12;AO=4451;CIGAR=1X;DP=4974;DPB=4974;DPRA=0;EPP=9668.23;EPPR=1134.35;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999101;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=178434;QR=20682;RO=521;RPL=0;RPP=9668.23;RPPR=1134.35;RPR=4451;RUN=1;SAF=4451;SAP=9668.23;SAR=0;SRF=521;SRP=1134.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:780:54,726:54:2102:726:29114:-2428.2,-45.4335,0 0/1:891:77,814:77:3057:814:32622:-2664.71,0,-6.988 1/1:582:24,558:24:962:558:22315:-1919.5,-88.3208,0 1/1:799:48,751:48:1922:751:30172:-2539.45,-67.34,0 0/1:1064:158,905:158:6290:905:36193:-2933.55,0,-245.45 0/1:858:160,697:160:6349:697:28018:-2260.7,0,-312.844 dDocent_Contig_3638 22 . A G 246.875 . AB=0.119266;ABP=277.492;AC=1;AF=0.0833333;AN=12;AO=66;CIGAR=1X;DP=1398;DPB=1398;DPRA=0.690446;EPP=146.327;EPPR=2895.41;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999249;PAO=0;PQA=0;PQR=0;PRO=0;QA=2539;QR=52174;RO=1332;RPL=0;RPP=146.327;RPPR=2895.41;RPR=66;RUN=1;SAF=66;SAP=146.327;SAR=0;SRF=1332;SRP=2895.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:231:215,16:215:8390:16:598:0,-15.3905,-700.581 0/1:218:192,26:192:7506:26:1017:-26.2104,0,-609.635 0/0:176:166,10:166:6482:10:378:0,-18.6122,-548.799 0/0:179:167,12:167:6513:12:471:0,-11.1428,-543.235 0/0:314:314,0:314:12313:0:0:0,-94.5234,-1107.44 0/0:280:278,2:278:10970:2:75:0,-77.1683,-979.536 dDocent_Contig_3639 26 . G A 99.3969 . AB=0.138889;ABP=84.5612;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=281;DPB=281;DPRA=0.688995;EPP=24.725;EPPR=565.71;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.885609;PAO=0;PQA=0;PQR=0;PRO=0;QA=379;QR=10746;RO=271;RPL=0;RPP=24.725;RPPR=591.479;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=268;SRP=565.71;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:35,6:35:1374:6:220:-7.80199,0,-111.569 0/0:60:60,0:60:2390:0:0:0,-18.0618,-215.249 0/1:31:27,4:27:1046:4:159:-5.35951,0,-85.0928 0/0:62:62,0:62:2478:0:0:0,-18.6639,-223.161 0/0:40:40,0:40:1587:0:0:0,-12.0412,-143.068 0/0:47:47,0:47:1871:0:0:0,-14.1484,-168.599 dDocent_Contig_3641 55 . A G 1547.12 . AB=0.213904;ABP=268.905;AC=3;AF=0.25;AN=12;AO=83;CIGAR=1X;DP=662;DPB=662;DPRA=1.72148;EPP=183.243;EPPR=1260.29;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3134;QR=21841;RO=579;RPL=83;RPP=183.243;RPPR=1260.29;RPR=0;RUN=1;SAF=83;SAP=183.243;SAR=0;SRF=579;SRP=1260.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:133:119,14:119:4527:14:521:-7.18836,0,-367.443 0/0:139:136,3:136:5075:3:116:0,-31.0255,-445.935 0/1:114:84,30:84:3133:30:1136:-68.2119,0,-247.798 0/1:127:91,36:91:3448:36:1361:-84.5335,0,-272.218 0/0:82:82,0:82:3126:0:0:0,-24.6845,-281.484 0/0:67:67,0:67:2532:0:0:0,-20.169,-228.063 dDocent_Contig_3642 33 . C T 467.569 . AB=0.22;ABP=71.1077;AC=3;AF=0.25;AN=12;AO=22;CIGAR=1X;DP=211;DPB=211;DPRA=0.900901;EPP=50.7827;EPPR=413.419;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.909091;PAIREDR=0.793651;PAO=0;PQA=0;PQR=0;PRO=0;QA=885;QR=7602;RO=189;RPL=0;RPP=50.7827;RPPR=413.419;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=189;SRP=413.419;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:31,3:31:1253:3:117:-0.674267,0,-102.802 0/0:46:46,0:46:1857:0:0:0,-13.8474,-167.333 0/1:30:21,9:21:848:9:364:-24.0935,0,-67.6002 0/1:36:26,10:26:1033:10:404:-25.8819,0,-82.4213 0/0:15:15,0:15:610:0:0:0,-4.51545,-55.2376 0/0:50:50,0:50:2001:0:0:0,-15.0515,-180.279 dDocent_Contig_3644 75 . C T 500.441 . AB=0.193548;ABP=129.446;AC=3;AF=0.25;AN=12;AO=47;CIGAR=1X;DP=580;DPB=580;DPRA=0.568212;EPP=105.07;EPPR=1158.23;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1766;QR=20006;RO=532;RPL=47;RPP=105.07;RPPR=1158.23;RPR=0;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=532;SRP=1158.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:53:43,10:43:1579:10:367:-17.416,0,-126.413 0/1:40:33,7:33:1208:7:255:-11.2579,0,-96.9642 0/1:62:49,13:49:1838:13:499:-26.5921,0,-146.999 0/0:54:52,1:52:1988:1:39:0,-12.2929,-175.41 0/0:220:204,16:204:7674:16:606:0,-11.3487,-635.621 0/0:151:151,0:151:5719:0:0:0,-45.4555,-514.673 dDocent_Contig_3645 27 . C T 7837.42 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=3;CIGAR=1X2M1X2M1X;DP=235;DPB=235;DPRA=1.12821;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=53;MQMR=0;NS=6;NUMALT=3;ODDS=6.93889e-18;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=118;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:42:0,0,42,0:0:0:0,42,0:0,1663,0:-149.767,-149.767,-149.767,-12.6433,-12.6433,0,-149.767,-149.767,-12.6433,-149.767 0|0:44:0,0,41,3:0:0:0,41,3:0,1614,99:-145.149,-145.149,-145.149,-12.3422,-12.3422,0,-137.149,-137.149,-4.00774,-136.246 0|0:44:0,3,41,0:0:0:3,41,0:118,1632,0:-146.726,-137.06,-136.157,-12.3422,-2.28425,0,-146.726,-137.06,-12.3422,-146.726 0|0:35:0,0,30,5:0:0:0,30,5:0,1145,156:-106.824,-106.824,-106.824,-12.8422,-12.8422,-3.81135,-94.3038,-94.3038,0,-92.7987 0|0:32:0,0,30,2:0:0:0,30,2:0,1165,68:-104.727,-104.727,-104.727,-9.0309,-9.0309,0,-99.2143,-99.2143,-3.17508,-98.6123 0|0:38:0,0,38,0:0:0:0,38,0:0,1462,0:-131.767,-131.767,-131.767,-11.4391,-11.4391,0,-131.767,-131.767,-11.4391,-131.767 dDocent_Contig_3646 11 . C G 11695.7 . AB=0.329085;ABP=341.487;AC=4;AF=0.333333;AN=12;AO=470;CIGAR=1X;DP=2109;DPB=2109;DPRA=0;EPP=1023.6;EPPR=3557.71;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0.993617;PAIREDR=0.997557;PAO=0;PQA=0;PQR=0;PRO=0;QA=18760;QR=63667;RO=1637;RPL=0;RPP=1023.6;RPPR=3557.71;RPR=470;RUN=1;SAF=470;SAP=1023.6;SAR=0;SRF=1637;SRP=3557.71;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:387:246,141:246:9578:141:5646:-391.449,0,-745.045 0/1:403:277,126:277:10771:126:5014:-329.831,0,-847.481 0/1:243:167,76:167:6480:76:3019:-198.639,0,-509.843 0/1:301:205,96:205:7926:96:3861:-256.872,0,-622.396 0/0:355:332,22:332:12975:22:878:0,-27.4899,-1087.63 0/0:420:410,9:410:15937:9:342:0,-95.1308,-1402.17 dDocent_Contig_3647 27 . G T 65.1379 . AB=0.0322581;ABP=120.83;AC=0;AF=0;AN=12;AO=5;CIGAR=1M12D2M1X13M;DP=272;DPB=264.483;DPRA=1.54206;EPP=13.8677;EPPR=535.021;GTI=0;LEN=1;MEANALT=4.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.97551;PAO=0;PQA=0;PQR=0;PRO=0;QA=191;QR=9576;RO=245;RPL=0;RPP=13.8677;RPPR=535.021;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=245;SRP=535.021;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:42:40,0,2:40:1561:0,2:0,72:0,-12.0412,-140.382,-5.80735,-134.51,-133.908 0|0:43:41,0,0:41:1614:0,0:0,0:0,-12.3422,-145.209,-12.3422,-145.209,-145.209 0|0:22:21,0,1:21:812:0,1:0,35:0,-6.32163,-73.0462,-3.12403,-70.2001,-69.8991 0|0:34:28,2,2:28:1091:2,2:78,78:0,-2.01791,-91.082,-2.01791,-85.2723,-91.082 0|0:69:67,1,0:67:2626:1,0:34,0:0,-17.2861,-233.224,-20.169,-233.525,-236.282 0|0:62:48,2,7:48:1872:2,7:79,273:-8.03666,-15.9768,-169.286,0,-147.446,-151.84 dDocent_Contig_3648 11 . C G 11742.3 . AB=0.403475;ABP=86.8509;AC=5;AF=0.416667;AN=12;AO=420;CIGAR=1X;DP=1063;DPB=1063;DPRA=0;EPP=915.029;EPPR=1397.1;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.995238;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=16693;QR=25619;RO=642;RPL=0;RPP=915.029;RPPR=1397.1;RPR=420;RUN=1;SAF=420;SAP=915.029;SAR=0;SRF=642;SRP=1397.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:238:67,171:67:2708:171:6741:-534.761,0,-172.182 0/1:238:150,88:150:5982:88:3524:-245.546,0,-466.504 0/1:152:111,41:111:4405:41:1615:-99.8197,0,-350.631 0/1:211:144,67:144:5733:67:2711:-180.581,0,-452.255 0/1:197:145,51:145:5794:51:2021:-122.744,0,-461.901 0/0:27:25,2:25:997:2:81:0,-0.442076,-82.3412 dDocent_Contig_3649 19 . C G 1463.17 . AB=0.390977;ABP=16.7412;AC=2;AF=0.166667;AN=12;AO=52;CIGAR=1X;DP=383;DPB=383;DPRA=1.064;EPP=115.927;EPPR=717.425;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.93921;PAO=0;PQA=0;PQR=0;PRO=0;QA=2100;QR=13052;RO=329;RPL=0;RPP=115.927;RPPR=717.425;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=329;SRP=717.425;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:49:47,0:47:1822:0:0:0,-14.1484,-163.789 0/0:88:88,0:88:3435:0:0:0,-26.4906,-309.2 0/0:54:54,0:54:2165:0:0:0,-16.2556,-195.019 0/0:59:59,0:59:2369:0:0:0,-17.7608,-213.357 0/1:104:61,43:61:2454:43:1741:-125.597,0,-189.692 0/1:29:20,9:20:807:9:359:-23.9423,0,-64.2172 dDocent_Contig_3650 107 . N A 719.389 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=23;CIGAR=1X;DP=23;DPB=23;DPRA=0;EPP=52.9542;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0.826087;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=775;QR=0;RO=0;RPL=0;RPP=52.9542;RPPR=0;RPR=23;RUN=1;SAF=0;SAP=52.9542;SAR=23;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:106:-9.88916,-0.90309,0 1/1:1:0,1:0:0:1:36:-3.59827,-0.30103,0 1/1:13:0,13:0:0:13:453:-41.1018,-3.91339,0 1/1:5:0,5:0:0:5:169:-15.5429,-1.50515,0 1/1:1:0,1:0:0:1:11:-1.09999,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_3651 15 . T C 142.678 . AB=0.140845;ABP=82.5596;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=200;DPB=200;DPRA=1.05;EPP=33.4109;EPPR=406.904;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.857143;PAIREDR=0.876344;PAO=0;PQA=0;PQR=0;PRO=0;QA=560;QR=7301;RO=186;RPL=0;RPP=33.4109;RPPR=406.904;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=186;SRP=406.904;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:32,0:32:1241:0:0:0,-9.63296,-111.971 0/0:45:44,1:44:1709:1:41:0,-9.45178,-149.955 0/0:30:28,2:28:1117:2:72:0,-2.19658,-93.9814 0/1:37:34,3:34:1352:3:122:-0.234383,0,-110.806 0/0:22:21,1:21:832:1:40:0,-2.62698,-71.1984 0/1:34:27,7:27:1050:7:285:-15.7894,0,-84.555 dDocent_Contig_3652 27 . T C 41021.5 . AB=0.585004;ABP=146.986;AC=6;AF=0.5;AN=12;AO=1342;CIGAR=1X;DP=2294;DPB=2294;DPRA=0;EPP=2917.13;EPPR=2065.91;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996842;PAO=0;PQA=0;PQR=0;PRO=0;QA=53411;QR=36289;RO=950;RPL=0;RPP=2917.13;RPPR=2065.91;RPR=1342;RUN=1;SAF=1342;SAP=2917.13;SAR=0;SRF=950;SRP=2065.91;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:290:180,109:180:6829:109:4352:-304.231,0,-527.054 0/1:340:196,143:196:7557:143:5666:-407.596,0,-577.753 0/1:205:97,108:97:3746:108:4258:-321.477,0,-275.519 0/1:181:89,92:89:3431:92:3697:-278.247,0,-254.412 0/1:715:255,460:255:9691:460:18306:-1430.8,0,-656.57 0/1:563:133,430:133:5035:430:17132:-1371.02,0,-283.655 dDocent_Contig_3653 19 . G C 519.828 . AB=0.120482;ABP=522.202;AC=1;AF=0.0833333;AN=12;AO=133;CIGAR=1X;DP=3374;DPB=3374;DPRA=0;EPP=291.816;EPPR=7036.41;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998148;PAO=0;PQA=0;PQR=0;PRO=0;QA=5226;QR=124547;RO=3239;RPL=0;RPP=291.816;RPPR=7036.41;RPR=133;RUN=1;SAF=133;SAP=291.816;SAR=0;SRF=3239;SRP=7036.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:415:365,50:365:14006:50:1977:-53.2046,0,-1134.88 0/0:491:478,12:478:18571:12:443:0,-107.701,-1629.98 0/0:572:556,16:556:21303:16:620:0,-116.059,-1859.83 0/0:398:373,25:373:14475:25:992:0,-30.235,-1212.34 0/0:827:820,6:820:31324:6:235:0,-227.537,-2795.62 0/0:671:647,24:647:24868:24:959:0,-115.379,-2149.89 dDocent_Contig_3654 63 . G A 3487.65 . AB=0.192797;ABP=776.827;AC=6;AF=0.5;AN=12;AO=182;CIGAR=1X;DP=944;DPB=944;DPRA=0;EPP=398.218;EPPR=1657.67;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.983516;PAIREDR=0.981627;PAO=0;PQA=0;PQR=0;PRO=0;QA=7139;QR=30070;RO=762;RPL=182;RPP=398.218;RPPR=1657.67;RPR=0;RUN=1;SAF=182;SAP=398.218;SAR=0;SRF=762;SRP=1657.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:127:94,33:94:3765:33:1276:-76.8746,0,-300.63 0/1:175:139,36:139:5422:36:1409:-74.388,0,-435.155 0/1:92:77,15:77:3065:15:584:-25.2,0,-248.24 0/1:131:90,41:90:3551:41:1567:-101.829,0,-280.209 0/1:212:186,26:186:7307:26:1047:-30.7033,0,-593.501 0/1:207:176,31:176:6960:31:1256:-50.9927,0,-563.792 dDocent_Contig_3655 57 . A G 98.3766 . AB=0.128571;ABP=86.8912;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=418;DPB=418;DPRA=0.985714;EPP=24.725;EPPR=880.285;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.2;PAIREDR=0.443069;PAO=0;PQA=0;PQR=0;PRO=0;QA=391;QR=15318;RO=404;RPL=10;RPP=24.725;RPPR=880.285;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=404;SRP=880.285;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:70:61,9:61:2317:9:353:-11.0595,0,-187.654 0/0:85:85,0:85:3220:0:0:0,-25.5875,-289.932 0/0:43:43,0:43:1684:0:0:0,-12.9443,-151.801 0/0:68:65,1:65:2452:1:38:0,-16.4537,-217.049 0/0:41:40,0:40:1459:0:0:0,-12.0412,-131.21 0/0:111:110,0:110:4186:0:0:0,-33.1133,-376.685 dDocent_Contig_3656 1 . N G 194.54 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=204;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:122:-11.3725,-0.90309,0 ./.:.:.:.:.:.:.:. dDocent_Contig_3657 30 . C T 204.951 . AB=0.130435;ABP=166.72;AC=2;AF=0.166667;AN=12;AO=26;CIGAR=1X;DP=545;DPB=545;DPRA=1.19744;EPP=59.4686;EPPR=1130;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9711;NS=6;NUMALT=1;ODDS=0;PAIRED=0.769231;PAIREDR=0.890173;PAO=0;PQA=0;PQR=0;PRO=0;QA=1041;QR=20636;RO=519;RPL=0;RPP=59.4686;RPPR=1130;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=519;SRP=1130;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:95:94,1:94:3772:1:41:0,-24.5033,-335.318 0/0:144:140,4:140:5564:4:162:0,-28.3814,-485.614 0/1:62:56,6:56:2182:6:238:-3.12971,0,-177.883 0/1:76:64,12:64:2549:12:479:-20.5819,0,-206.664 0/0:78:78,0:78:3127:0:0:0,-23.4803,-281.496 0/0:90:87,3:87:3442:3:121:0,-15.8125,-298.525 dDocent_Contig_3658 26 . T C 87.1083 . AB=0.0878136;ABP=826.458;AC=1;AF=0.0833333;AN=12;AO=131;CIGAR=1X;DP=3138;DPB=3138;DPRA=0;EPP=287.473;EPPR=6532.63;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999002;PAO=0;PQA=0;PQR=0;PRO=0;QA=5276;QR=121107;RO=3007;RPL=0;RPP=287.473;RPPR=6532.63;RPR=131;RUN=1;SAF=131;SAP=287.473;SAR=0;SRF=3007;SRP=6532.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:346:335,11:335:13464:11:446:0,-63.6608,-1170.2 0/0:493:455,38:455:18351:38:1541:0,-9.48417,-1511.08 0/0:320:301,19:301:12121:19:769:0,-26.7993,-1020.46 0/1:558:509,49:509:20583:49:1978:-10.2337,0,-1682.62 0/0:777:765,12:765:30709:12:462:0,-191.983,-2718.98 0/0:644:642,2:642:25879:2:80:0,-186.272,-2319.1 dDocent_Contig_3659 11 . T C 398.919 . AB=0.131474;ABP=299.101;AC=3;AF=0.25;AN=12;AO=44;CIGAR=1X;DP=520;DPB=520;DPRA=1.16842;EPP=98.5551;EPPR=1036.63;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.681818;PAIREDR=0.581933;PAO=0;PQA=0;PQR=0;PRO=0;QA=1769;QR=18253;RO=476;RPL=0;RPP=98.5551;RPPR=1036.63;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=476;SRP=1036.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:75:64,11:64:2413:11:436:-17.0149,0,-194.786 0/0:143:135,8:135:5183:8:317:0,-14.1509,-437.548 0/0:50:47,3:47:1820:3:123:0,-3.58671,-152.568 0/1:94:82,12:82:3143:12:490:-16.1543,0,-254.716 0/0:76:76,0:76:2911:0:0:0,-22.8783,-262.133 0/1:82:72,10:72:2783:10:403:-11.9445,0,-225.947 dDocent_Contig_3660 36 . G A 133.833 . AB=0.186047;ABP=39.8243;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=189;DPB=189;DPRA=0.62931;EPP=22.5536;EPPR=393.875;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.888889;PAIREDR=0.705556;PAO=0;PQA=0;PQR=0;PRO=0;QA=347;QR=7017;RO=180;RPL=0;RPP=22.5536;RPPR=393.875;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=180;SRP=393.875;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:17,6:17:664:6:235:-14.5979,0,-53.1656 0/0:42:42,0:42:1604:0:0:0,-12.6433,-144.611 0/1:20:18,2:18:701:2:74:-1.00483,0,-57.3932 0/0:30:29,1:29:1147:1:38:0,-5.23363,-99.7199 0/0:30:30,0:30:1175:0:0:0,-9.0309,-106.036 0/0:44:44,0:44:1726:0:0:0,-13.2453,-155.576 dDocent_Contig_3661 10 . G C 2037.38 . AB=0.124636;ABP=1682.1;AC=2;AF=0.166667;AN=12;AO=229;CIGAR=1X;DP=3836;DPB=3836;DPRA=0.946786;EPP=500.277;EPPR=7829;GTI=0;LEN=1;MEANALT=1.6;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9228;QR=143392;RO=3604;RPL=0;RPP=500.277;RPPR=7829;RPR=229;RUN=1;SAF=229;SAP=500.277;SAR=0;SRF=3604;SRP=7829;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:481:469,12:469:18689:12:484:0,-100.885,-1636.58 0/0:669:669,0:669:26723:0:0:0,-201.389,-2402.71 0/0:574:538,36:538:21396:36:1459:0,-41.2399,-1792.3 0/1:628:548,78:548:21870:78:3136:-93.6056,0,-1777.75 0/1:744:651,93:651:25793:93:3748:-113.354,0,-2095.22 0/0:740:729,10:729:28921:10:401:0,-186.141,-2563.97 dDocent_Contig_3662 98 . N A 130.905 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=131;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:28:-2.65997,-0.60206,0 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 dDocent_Contig_3663 8 . C T 859.189 . AB=0.134168;ABP=652.824;AC=2;AF=0.166667;AN=12;AO=82;CIGAR=1X;DP=1442;DPB=1442;DPRA=0.778369;EPP=181.071;EPPR=2951.87;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999264;PAO=0;PQA=0;PQR=0;PRO=0;QA=3126;QR=52133;RO=1358;RPL=0;RPP=181.071;RPPR=2951.87;RPR=82;RUN=1;SAF=82;SAP=181.071;SAR=0;SRF=1358;SRP=2951.87;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:107:106,1:106:4069:1:38:0,-28.4129,-362.497 0/0:212:206,6:206:7841:6:234:0,-42.3873,-684.074 0/0:105:105,0:105:4051:0:0:0,-31.6081,-364.671 0/1:210:185,25:185:7122:25:952:-22.7749,0,-577.618 0/0:459:457,0:457:17584:0:0:0,-137.571,-1581.25 0/1:349:299,50:299:11466:50:1902:-66.3659,0,-926.422 dDocent_Contig_3664 21 . C A 333.982 . AB=0.123596;ABP=331.586;AC=1;AF=0.0833333;AN=12;AO=44;CIGAR=1X;DP=1013;DPB=1013;DPRA=1.67989;EPP=98.5551;EPPR=2102.82;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997932;PAO=0;PQA=0;PQR=0;PRO=0;QA=1720;QR=38459;RO=967;RPL=0;RPP=98.5551;RPPR=2102.82;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=967;SRP=2102.82;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:173:166,7:166:6635:7:279:0,-26.5982,-571.396 0/1:267:234,33:234:9339:33:1278:-34.9211,0,-759.582 0/0:102:102,0:102:4012:0:0:0,-30.7051,-361.089 0/0:195:189,4:189:7510:4:163:0,-43.376,-660.517 0/0:138:138,0:138:5522:0:0:0,-41.5421,-496.809 0/0:138:138,0:138:5441:0:0:0,-41.5421,-489.538 dDocent_Contig_3665 1 . N G 74.0456 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=78;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:78:-7.40347,-0.60206,0 dDocent_Contig_3666 21 . A G 1016.03 . AB=0.195489;ABP=217.251;AC=2;AF=0.166667;AN=12;AO=52;CIGAR=1X;DP=423;DPB=423;DPRA=3.38854;EPP=115.927;EPPR=808.627;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997305;PAO=0;PQA=0;PQR=0;PRO=0;QA=2048;QR=14328;RO=371;RPL=0;RPP=115.927;RPPR=808.627;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=371;SRP=808.627;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:57:57,0:57:2163:0:0:0,-17.1587,-194.862 0/0:44:44,0:44:1685:0:0:0,-13.2453,-151.888 0/0:35:35,0:35:1350:0:0:0,-10.536,-121.77 0/0:21:21,0:21:824:0:0:0,-6.32163,-74.4782 0/1:129:109,20:109:4258:20:771:-30.8679,0,-344.385 0/1:137:105,32:105:4048:32:1277:-73.9567,0,-323.113 dDocent_Contig_3667 10 . G T 11858.8 . AB=0.0893015;ABP=1660.01;AC=1;AF=0.0833333;AN=12;AO=101;CIGAR=2X;DP=1131;DPB=1131;DPRA=0;EPP=222.329;EPPR=1358.01;GTI=0;LEN=1;MEANALT=2.16667;MQM=58.2772;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.980198;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4035;QR=24766;RO=624;RPL=0;RPP=222.329;RPPR=1358.01;RPR=101;RUN=1;SAF=101;SAP=222.329;SAR=0;SRF=624;SRP=1358.01;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:135:74,20,41:74:2934:20,41:806,1648:-113.53,-70.3059,-305.781,0,-175.997,-229.156 0|0:190:99,22,69:99:3950:22,69:875,2764:-197.904,-155.667,-474.339,0,-253.257,-304.525 0|1:141:109,26,6:109:4295:26,6:1023,245:-46.8822,0,-345.467,-59.4726,-333.078,-410.989 0|0:173:67,4,102:67:2651:4,102:161,4045:-312.769,-319.668,-536.625,0,-204.885,-187.449 0|0:249:132,1,116:132:5248:1,116:40,4567:-335.927,-372.368,-804.133,0,-428.766,-397.142 0|0:243:143,28,71:143:5688:28,71:1130,2831:-190.086,-139.981,-599.846,0,-375.138,-446.916 dDocent_Contig_3668 98 . N A 60.9423 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=3X;DP=2;DPB=30.6667;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=48;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=7;PQA=236;PQR=0;PRO=0;QA=68;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:2:0,2:0:0:2:68:-6.09314,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_3669 10 . G A 7010.19 . AB=0.177828;ABP=1995.44;AC=6;AF=0.5;AN=12;AO=393;CIGAR=1X;DP=2210;DPB=2210;DPRA=0;EPP=856.399;EPPR=3861.76;GTI=0;LEN=1;MEANALT=2.33333;MQM=55.3791;MQMR=43.0738;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0.994911;PAIREDR=0.975405;PAO=0;PQA=0;PQR=0;PRO=0;QA=15669;QR=71269;RO=1789;RPL=0;RPP=856.399;RPPR=3887.77;RPR=393;RUN=1;SAF=393;SAP=856.399;SAR=0;SRF=1786;SRP=3861.76;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:333:253,79:253:9930:79:3144:-179.531,0,-679.506 0/1:411:340,70:340:13598:70:2833:-127.402,0,-980.266 0/1:252:202,49:202:8054:49:1948:-96.0522,0,-565.466 0/1:290:233,55:233:9323:55:2200:-103.941,0,-691.72 0/1:496:413,71:413:16420:71:2817:-105.373,0,-1016.75 0/1:428:348,69:348:13944:69:2727:-99.9414,0,-851.826 dDocent_Contig_3671 14 . G A 49.4064 . AB=0.1875;ABP=16.582;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=120;DPB=120;DPRA=0.769231;EPP=9.52472;EPPR=257.073;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=121;QR=4543;RO=117;RPL=0;RPP=9.52472;RPPR=257.073;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=117;SRP=257.073;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:272:0:0:0,-2.10721,-24.8419 0/1:16:13,3:13:506:3:121:-6.46351,0,-41.0675 0/0:12:12,0:12:463:0:0:0,-3.61236,-42.0135 0/0:16:16,0:16:597:0:0:0,-4.81648,-54.0557 0/0:48:48,0:48:1868:0:0:0,-14.4494,-168.323 0/0:21:21,0:21:837:0:0:0,-6.32163,-75.644 dDocent_Contig_3672 77 . C T 104.181 . AB=0.16;ABP=53.2147;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=414;DPB=414;DPRA=0.686813;EPP=20.3821;EPPR=878.114;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.605459;PAO=0;PQA=0;PQR=0;PRO=0;QA=296;QR=14392;RO=403;RPL=4;RPP=3.0103;RPPR=57.976;RPR=4;RUN=1;SAF=4;SAP=3.0103;SAR=4;SRF=252;SRP=57.976;SRR=151;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:66:66,0:66:2313:0:0:0,-19.868,-208.422 0/0:100:99,0:99:3536:0:0:0,-29.802,-318.075 0/0:67:67,0:67:2398:0:0:0,-20.169,-216.051 0/1:50:42,8:42:1498:8:296:-11.941,0,-120.049 0/0:80:78,0:78:2770:0:0:0,-23.4803,-249.128 0/0:51:51,0:51:1877:0:0:0,-15.3525,-169.191 dDocent_Contig_3673 12 . C T 225.254 . AB=0.160305;ABP=134.31;AC=2;AF=0.166667;AN=12;AO=33;CIGAR=1X;DP=467;DPB=467;DPRA=0;EPP=74.6689;EPPR=928.138;GTI=0;LEN=1;MEANALT=1;MQM=59.4848;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.995392;PAO=0;PQA=0;PQR=0;PRO=0;QA=1115;QR=17209;RO=434;RPL=0;RPP=74.6689;RPPR=945.429;RPR=33;RUN=1;SAF=0;SAP=74.6689;SAR=33;SRF=432;SRP=928.138;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:91:89,2:89:3537:2:52:0,-22.4551,-313.419 0/0:121:118,3:118:4681:3:103:0,-26.8148,-411.594 0/0:48:46,2:46:1805:2:68:0,-7.99156,-156.212 0/1:78:68,10:68:2711:10:336:-7.07919,0,-220.624 0/0:76:71,5:71:2810:5:175:0,-6.78477,-236.924 0/1:53:42,11:42:1665:11:381:-18.6681,0,-134.125 dDocent_Contig_3674 15 . T C 3722.61 . AB=0.160289;ABP=1391.31;AC=6;AF=0.5;AN=12;AO=222;CIGAR=1X;DP=1385;DPB=1385;DPRA=0;EPP=485.077;EPPR=2528.43;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.869369;PAIREDR=0.99914;PAO=0;PQA=0;PQR=0;PRO=0;QA=8859;QR=45905;RO=1163;RPL=0;RPP=485.077;RPPR=2528.43;RPR=222;RUN=1;SAF=222;SAP=485.077;SAR=0;SRF=1163;SRP=2528.43;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:154:129,25:129:5110:25:985:-42.5878,0,-413.43 0/1:196:116,80:116:4539:80:3194:-228.521,0,-349.445 0/1:178:150,28:150:5926:28:1108:-46.4112,0,-479.554 0/1:252:216,36:216:8560:36:1461:-55.874,0,-694.083 0/1:265:243,22:243:9671:22:887:-0.364784,0,-790.034 0/1:340:309,31:309:12099:31:1224:-8.08669,0,-985.775 dDocent_Contig_3676 19 . G A 6644.02 . AB=0.249339;ABP=622.427;AC=3;AF=0.25;AN=12;AO=346;CIGAR=1X;DP=2399;DPB=2399;DPRA=0;EPP=754.34;EPPR=4461.04;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998539;PAO=0;PQA=0;PQR=0;PRO=0;QA=13734;QR=80893;RO=2053;RPL=0;RPP=754.34;RPPR=4461.04;RPR=346;RUN=1;SAF=346;SAP=754.34;SAR=0;SRF=2053;SRP=4461.04;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:307:276,31:276:10816:31:1232:-18.737,0,-880.313 0/0:382:356,26:356:13969:26:1044:0,-20.7423,-1162 0/0:374:357,17:357:14115:17:647:0,-54.0387,-1210.76 0/0:508:488,20:488:19260:20:807:0,-79.9765,-1658.91 0/1:497:354,143:354:13969:143:5682:-361.597,0,-1106.6 0/1:331:222,109:222:8764:109:4322:-289.29,0,-688.622 dDocent_Contig_3677 14 . A G 1275.1 . AB=0.296703;ABP=68.3454;AC=5;AF=0.416667;AN=12;AO=54;CIGAR=1X;DP=211;DPB=211;DPRA=1.25517;EPP=120.27;EPPR=343.931;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.759259;PAIREDR=0.872611;PAO=0;PQA=0;PQR=0;PRO=0;QA=2109;QR=6290;RO=157;RPL=0;RPP=120.27;RPPR=343.931;RPR=54;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=157;SRP=343.931;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:14,8:14:568:8:309:-21.5459,0,-44.8401 0/1:31:27,4:27:1082:4:161:-5.54334,0,-88.3343 0/1:35:18,17:18:712:17:663:-49.4581,0,-53.8645 0/1:72:51,21:51:2057:21:838:-54.0567,0,-163.639 0/1:22:18,4:18:720:4:138:-6.12828,0,-58.5035 0/0:29:29,0:29:1151:0:0:0,-8.72987,-103.87 dDocent_Contig_3678 48 . A G 7724.02 . AB=0.459322;ABP=11.4901;AC=4;AF=0.333333;AN=12;AO=280;CIGAR=1X;DP=753;DPB=753;DPRA=4.9931;EPP=602.368;EPPR=1030.12;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10988;QR=18611;RO=473;RPL=1;RPP=602.368;RPPR=1030.12;RPR=279;RUN=1;SAF=280;SAP=611.023;SAR=0;SRF=473;SRP=1030.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:200:87,113:87:3438:113:4350:-331.274,0,-249.268 0/1:130:67,63:67:2663:63:2517:-187.53,0,-200.654 0/1:78:60,18:60:2357:18:727:-42.2749,0,-188.801 0/1:182:105,77:105:4053:77:3036:-218.546,0,-309.998 0/0:29:29,0:29:1121:0:0:0,-8.72987,-101.169 0/0:134:125,9:125:4979:9:358:0,-7.75591,-415.411 dDocent_Contig_3679 11 . A C 3999.05 . AB=0.227684;ABP=500.907;AC=3;AF=0.25;AN=12;AO=192;CIGAR=1X;DP=1274;DPB=1274;DPRA=0;EPP=419.933;EPPR=2352.54;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.979167;PAIREDR=0.986137;PAO=0;PQA=0;PQR=0;PRO=0;QA=7687;QR=42945;RO=1082;RPL=0;RPP=419.933;RPPR=2352.54;RPR=192;RUN=1;SAF=192;SAP=419.933;SAR=0;SRF=1082;SRP=2352.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:157:154,3:154:6134:3:118:0,-36.2601,-540.831 0/0:147:146,1:146:5755:1:41:0,-40.1568,-513.68 0/1:106:97,9:97:3820:9:364:-1.2152,0,-311.892 0/0:197:185,12:185:7323:12:455:0,-18.0198,-617.45 0/1:305:229,76:229:9161:76:3056:-183.298,0,-732.119 0/1:362:271,91:271:10752:91:3653:-219.817,0,-858.013 dDocent_Contig_3680 91 . G A 96.6347 . AB=0.141176;ABP=98.0697;AC=1;AF=0.0833333;AN=12;AO=45;CIGAR=1X;DP=634;DPB=634;DPRA=1.04314;EPP=100.727;EPPR=1282.01;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.933333;PAIREDR=0.881154;PAO=0;PQA=0;PQR=0;PRO=0;QA=1570;QR=19879;RO=589;RPL=45;RPP=100.727;RPPR=1282.01;RPR=0;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=589;SRP=1282.01;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:102:102,0:102:3425:0:0:0,-30.7051,-308.477 0/0:131:125,6:125:4206:6:213:0,-19.9185,-359.23 0/0:82:76,6:76:2534:6:210:0,-5.44235,-209.072 0/1:85:73,12:73:2462:12:405:-11.1859,0,-196.25 0/0:116:106,10:106:3653:10:353:0,-2.81026,-296.886 0/0:118:107,11:107:3599:11:389:0,-0.17303,-288.788 dDocent_Contig_3681 63 . C A 635.11 . AB=0.108355;ABP=1023.55;AC=1;AF=0.0833333;AN=12;AO=147;CIGAR=1X;DP=3768;DPB=3768;DPRA=1.53641;EPP=322.217;EPPR=7857.23;GTI=0;LEN=1;MEANALT=1.8;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.979265;PAO=0;PQA=0;PQR=0;PRO=0;QA=5702;QR=140687;RO=3617;RPL=147;RPP=322.217;RPPR=7857.23;RPR=0;RUN=1;SAF=147;SAP=322.217;SAR=0;SRF=3617;SRP=7857.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:434:434,0:434:16855:0:0:0,-130.647,-1515.74 0/0:647:644,2:644:24957:2:69:0,-188.235,-2237.72 0/0:713:710,1:710:27788:1:7:0,-213.514,-2497.77 0/0:528:516,11:516:19956:11:402:0,-122.234,-1758.13 0/1:766:683,83:683:26605:83:3284:-65.0339,0,-2161.73 0/0:680:630,50:630:24526:50:1940:0,-29.892,-2030.64 dDocent_Contig_3682 98 . N T 123.073 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=122;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:5:-0.499999,-0.30103,0 1/1:1:0,1:0:0:1:15:-1.49999,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:6:-0.599999,-0.30103,0 1/1:3:0,3:0:0:3:96:-8.95796,-0.90309,0 dDocent_Contig_3683 11 . A G 15601.7 . AB=0.192833;ABP=3364.72;AC=5;AF=0.416667;AN=12;AO=821;CIGAR=1X;DP=5087;DPB=5087;DPRA=0;EPP=1785.79;EPPR=9264.34;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=32355;QR=170196;RO=4265;RPL=0;RPP=1785.79;RPPR=9264.34;RPR=821;RUN=1;SAF=821;SAP=1785.79;SAR=0;SRF=4265;SRP=9264.34;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:820:607,213:607:24232:213:8351:-504.309,0,-1931.9 0/1:924:681,242:681:27186:242:9555:-581.118,0,-2166.06 0/1:771:650,121:650:25889:121:4773:-197.386,0,-2095.64 0/1:881:742,139:742:29620:139:5492:-228.915,0,-2397.91 0/0:985:955,30:955:38114:30:1183:0,-189.766,-3319.96 0/1:706:630,76:630:25155:76:3001:-57.6606,0,-2049.2 dDocent_Contig_3684 10 . G T 148.728 . AB=0.130435;ABP=112.15;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=367;DPB=367;DPRA=1.63366;EPP=42.0968;EPPR=752.193;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.7192;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.991404;PAO=0;PQA=0;PQR=0;PRO=0;QA=721;QR=13895;RO=349;RPL=0;RPP=42.0968;RPPR=760.854;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=348;SRP=752.193;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:60:60,0:60:2391:0:0:0,-18.0618,-215.335 0/1:92:80,12:80:3187:12:486:-16.3954,0,-253.978 0/0:57:57,0:57:2310:0:0:0,-17.1587,-208.049 0/0:73:67,6:67:2655:6:235:0,-0.455925,-217.556 0/0:43:43,0:43:1681:0:0:0,-12.9443,-151.518 0/0:42:42,0:42:1671:0:0:0,-12.6433,-150.62 dDocent_Contig_3685 7 . C A 1243.98 . AB=0.261682;ABP=108.58;AC=2;AF=0.166667;AN=12;AO=56;CIGAR=1X;DP=603;DPB=603;DPRA=1.10026;EPP=124.613;EPPR=1188.63;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.941392;PAO=0;PQA=0;PQR=0;PRO=0;QA=2127;QR=20950;RO=546;RPL=0;RPP=124.613;RPPR=1188.63;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=546;SRP=1188.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:91:90,0:90:3454:0:0:0,-27.0927,-310.599 0/0:133:133,0:133:5087:0:0:0,-40.037,-457.839 0/0:67:67,0:67:2579:0:0:0,-20.169,-232.305 0/0:98:98,0:98:3763:0:0:0,-29.5009,-338.777 0/1:98:66,32:66:2501:32:1211:-79.7825,0,-195.792 0/1:116:92,24:92:3566:24:916:-47.8373,0,-286.135 dDocent_Contig_3686 54 . T A 54.5902 . AB=0.108108;ABP=101.724;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=502;DPB=502;DPRA=0.864486;EPP=20.3821;EPPR=1075.72;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993927;PAO=0;PQA=0;PQR=0;PRO=0;QA=321;QR=19537;RO=494;RPL=8;RPP=20.3821;RPPR=1075.72;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=494;SRP=1075.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:104:104,0:104:4078:0:0:0,-31.3071,-367.009 0/0:66:66,0:66:2627:0:0:0,-19.868,-236.557 0/0:113:113,0:113:4496:0:0:0,-34.0164,-404.58 0/0:62:62,0:62:2431:0:0:0,-18.6639,-218.945 0/0:83:83,0:83:3281:0:0:0,-24.9855,-295.357 0/1:74:66,8:66:2624:8:321:-6.98189,0,-214.017 dDocent_Contig_3687 9 . A G 123621 . AB=0.79792;ABP=3932.44;AC=6;AF=0.5;AN=12;AO=4067;CIGAR=1X2M;DP=5097;DPB=5097;DPRA=0;EPP=8834.39;EPPR=1570.81;GTI=0;LEN=1;MEANALT=5;MQM=58.9511;MQMR=59.5651;NS=6;NUMALT=2;ODDS=0;PAIRED=0.994836;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=153929;QR=28170;RO=722;RPL=0;RPP=8834.39;RPPR=1570.81;RPR=4067;RUN=1;SAF=4067;SAP=8834.39;SAR=0;SRF=722;SRP=1570.81;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:896:126,82,686:126:4900:82,686:3167,25874:-2077.5,-1855.4,-2231.93,0,-141.189,-194.71 0|1:1043:197,43,795:197:7685:43,795:1675,29964:-2388.91,-2310.55,-2925.22,0,-489.961,-388.308 0|1:634:88,38,505:88:3455:38,505:1479,19091:-1532.49,-1437.44,-1704.37,0,-156.831,-126.352 0|1:801:122,40,632:122:4730:40,632:1576,23942:-1919.78,-1826.84,-2202.83,0,-258.361,-197.77 0|1:969:116,13,827:116:4543:13,827:496,31440:-2541.44,-2535.67,-2905.32,0,-332.879,-124.616 0|1:754:73,27,622:73:2857:27,622:1052,23618:-1913.23,-1848.74,-2075.52,0,-148.448,-47.6685 dDocent_Contig_3688 54 . T C 713.037 . AB=0.209302;ABP=129.259;AC=3;AF=0.25;AN=12;AO=43;CIGAR=1X;DP=396;DPB=396;DPRA=0.966667;EPP=96.3836;EPPR=769.54;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9207;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994334;PAO=0;PQA=0;PQR=0;PRO=0;QA=1690;QR=14013;RO=353;RPL=43;RPP=96.3836;RPPR=760.879;RPR=0;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=352;SRP=760.879;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:77:77,0:77:3075:0:0:0,-23.1793,-276.823 0/1:52:42,10:42:1652:10:396:-20.3435,0,-132.398 0/0:89:82,7:82:3242:7:276:0,-1.58551,-266.64 0/1:100:78,22:78:3098:22:854:-47.0527,0,-248.8 0/0:58:58,0:58:2304:0:0:0,-17.4597,-207.504 0/1:20:16,4:16:642:4:164:-9.1293,0,-52.0941 dDocent_Contig_3689 75 . T A 44796.9 . AB=0.44707;ABP=108.062;AC=6;AF=0.5;AN=12;AO=1930;CIGAR=1X;DP=4317;DPB=4317;DPRA=0;EPP=4193.95;EPPR=5151.57;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999156;PAO=0;PQA=0;PQR=0;PRO=0;QA=64296;QR=79375;RO=2371;RPL=1930;RPP=4193.95;RPPR=5151.57;RPR=0;RUN=1;SAF=1930;SAP=4193.95;SAR=0;SRF=2371;SRP=5151.57;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:751:547,204:547:18305:204:6837:-389.391,0,-1421.16 0/1:692:456,235:456:15293:235:7762:-490.326,0,-1167.88 0/1:765:459,305:459:15456:305:10203:-688.261,0,-1160.86 0/1:705:400,304:400:13260:304:10074:-694.449,0,-981.091 0/1:759:271,476:271:9113:476:15904:-1206.02,0,-595.016 0/1:645:238,406:238:7948:406:13516:-1022.47,0,-521.504 dDocent_Contig_3690 98 . N T 332.02 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=10;CIGAR=1X;DP=10;DPB=10;DPRA=0;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=347;QR=0;RO=0;RPL=10;RPP=24.725;RPPR=0;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 1/1:3:0,3:0:0:3:106:-9.8891,-0.90309,0 1/1:3:0,3:0:0:3:106:-9.88916,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:66:-6.26818,-0.60206,0 dDocent_Contig_3691 45 . C G 16214.7 . AB=0.494263;ABP=3.3342;AC=6;AF=0.5;AN=12;AO=560;CIGAR=1X;DP=1133;DPB=1133;DPRA=0;EPP=1219.03;EPPR=1245.09;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996503;PAO=0;PQA=0;PQR=0;PRO=0;QA=21929;QR=22878;RO=572;RPL=0;RPP=1219.03;RPPR=1245.09;RPR=560;RUN=1;SAF=560;SAP=1219.03;SAR=0;SRF=572;SRP=1245.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:128:40,88:40:1597:88:3416:-268.974,0,-105.436 0/1:197:35,162:35:1406:162:6357:-512.612,0,-67.49 0/1:130:43,87:43:1714:87:3425:-269.178,0,-115.35 0/1:126:24,102:24:975:102:3917:-314.622,0,-50.1168 0/1:319:272,46:272:10912:46:1826:-68.4284,0,-885.198 0/1:233:158,75:158:6274:75:2988:-198.879,0,-494.261 dDocent_Contig_3692 98 . N C 621.276 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=21;CIGAR=1X;DP=21;DPB=21;DPRA=0;EPP=48.6112;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=665;QR=0;RO=0;RPL=21;RPP=48.6112;RPPR=0;RPR=0;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:107:-9.89483,-1.20412,0 ./.:.:.:.:.:.:.:. 1/1:9:0,9:0:0:9:298:-27.1422,-2.70927,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:3:0,3:0:0:3:104:-9.70309,-0.90309,0 1/1:4:0,4:0:0:4:121:-11.1892,-1.20412,0 dDocent_Contig_3693 79 . G C 8904.56 . AB=0.514158;ABP=4.17856;AC=6;AF=0.5;AN=12;AO=345;CIGAR=1X;DP=671;DPB=671;DPRA=0;EPP=752.168;EPPR=710.91;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.950725;PAIREDR=0.920245;PAO=0;PQA=0;PQR=0;PRO=0;QA=12245;QR=11584;RO=326;RPL=345;RPP=752.168;RPPR=710.91;RPR=0;RUN=1;SAF=345;SAP=752.168;SAR=0;SRF=326;SRP=710.91;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:118:49,69:49:1742:69:2348:-176.064,0,-121.544 0/1:131:52,79:52:1801:79:2721:-205.708,0,-122.933 0/1:79:33,46:33:1183:46:1691:-128.689,0,-82.9923 0/1:109:72,37:72:2587:37:1320:-86.2839,0,-200.252 0/1:106:51,55:51:1795:55:2011:-149.347,0,-129.908 0/1:128:69,59:69:2476:59:2154:-155.585,0,-184.551 dDocent_Contig_3694 12 . G A 5013.94 . AB=0.285315;ABP=289.247;AC=5;AF=0.416667;AN=12;AO=212;CIGAR=1X;DP=827;DPB=827;DPRA=0;EPP=463.362;EPPR=1338.47;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.995122;PAO=0;PQA=0;PQR=0;PRO=0;QA=8372;QR=24487;RO=615;RPL=0;RPP=463.362;RPPR=1338.47;RPR=212;RUN=1;SAF=212;SAP=463.362;SAR=0;SRF=615;SRP=1338.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:129:104,25:104:4113:25:983:-49.9341,0,-331.317 0/0:112:104,8:104:4085:8:320:0,-4.54806,-338.463 0/1:179:137,42:137:5516:42:1657:-95.4726,0,-442.358 0/1:145:89,56:89:3534:56:2189:-153.542,0,-274.443 0/1:140:103,37:103:4123:37:1467:-90.1381,0,-328.899 0/1:122:78,44:78:3116:44:1756:-121.529,0,-243.794 dDocent_Contig_3695 1 . N G 117.802 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=119;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:37:-3.69783,-0.30103,0 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_3696 51 . C T 2009.2 . AB=0.127203;ABP=1578.33;AC=3;AF=0.25;AN=12;AO=196;CIGAR=1X;DP=2811;DPB=2811;DPRA=0.887427;EPP=428.619;EPPR=5681.41;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0.994898;PAIREDR=0.999618;PAO=0;PQA=0;PQR=0;PRO=0;QA=7831;QR=104483;RO=2615;RPL=196;RPP=428.619;RPPR=5681.41;RPR=0;RUN=1;SAF=196;SAP=428.619;SAR=0;SRF=2615;SRP=5681.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:469:440,29:440:17566:29:1151:0,-37.314,-1475.61 0/1:520:438,82:438:17509:82:3302:-140.693,0,-1417.81 0/1:345:311,34:311:12407:34:1378:-20.4168,0,-1011.86 0/1:440:390,50:390:15724:50:1970:-45.0327,0,-1281.4 0/0:520:519,1:519:20612:1:30:0,-153.536,-1850.29 0/0:517:517,0:517:20665:0:0:0,-155.633,-1858.05 dDocent_Contig_3697 14 . T C 20592 . AB=0.593778;ABP=88.9446;AC=6;AF=0.5;AN=12;AO=668;CIGAR=1X;DP=1125;DPB=1125;DPRA=0;EPP=1453.55;EPPR=995.373;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=26773;QR=16954;RO=457;RPL=0;RPP=1453.55;RPPR=995.373;RPR=668;RUN=1;SAF=668;SAP=1453.55;SAR=0;SRF=457;SRP=995.373;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:233:124,109:124:4607:109:4338:-320.219,0,-344.57 0/1:254:67,187:67:2481:187:7533:-601.094,0,-147.037 0/1:195:48,147:48:1790:147:5893:-471.441,0,-102.652 0/1:218:58,160:58:2131:160:6402:-510.265,0,-126.399 0/1:112:100,12:100:3722:12:464:-8.38269,0,-301.398 0/1:113:60,53:60:2223:53:2143:-159.02,0,-166.278 dDocent_Contig_3698 36 . T A 70.1859 . AB=0.172414;ABP=30.0414;AC=2;AF=0.166667;AN=12;AO=5;CIGAR=2X;DP=126;DPB=126;DPRA=0.597938;EPP=13.8677;EPPR=265.758;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=202;QR=4843;RO=121;RPL=0;RPP=13.8677;RPPR=265.758;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=121;SRP=265.758;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:16:16,0:16:635:0:0:0,-4.81648,-57.4839 0|0:18:18,0:18:719:0:0:0,-5.41854,-65.034 0|0:50:50,0:50:2004:0:0:0,-15.0515,-180.551 0|0:13:13,0:13:527:0:0:0,-3.91339,-47.7768 0|1:15:13,2:13:525:2:80:-3.07634,0,-43.0817 0|1:14:11,3:11:433:3:122:-7.15807,0,-35.1045 dDocent_Contig_3699 98 . N C 385.837 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=12;CIGAR=1X;DP=12;DPB=12;DPRA=0;EPP=29.068;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=407;QR=0;RO=0;RPL=12;RPP=29.068;RPPR=0;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:104:-9.70309,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:102:-9.5168,-0.90309,0 1/1:4:0,4:0:0:4:131:-12.1138,-1.20412,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 dDocent_Contig_3700 25 . C G 7948.54 . AB=0.244089;ABP=821.006;AC=4;AF=0.333333;AN=12;AO=381;CIGAR=1X;DP=1836;DPB=1836;DPRA=0;EPP=830.341;EPPR=3158.16;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999312;PAO=0;PQA=0;PQR=0;PRO=0;QA=14896;QR=57717;RO=1453;RPL=0;RPP=830.341;RPPR=3158.16;RPR=381;RUN=1;SAF=381;SAP=830.341;SAR=0;SRF=1453;SRP=3158.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:190:140,50:140:5541:50:1954:-118.877,0,-441.32 0/1:272:225,46:225:8913:46:1784:-78.9989,0,-719.887 0/0:121:112,9:112:4450:9:353:0,-4.29487,-368.315 0/0:277:255,21:255:10065:21:825:0,-8.92886,-830.682 0/1:601:446,155:446:17794:155:6070:-365.182,0,-1419.11 0/1:375:275,100:275:10954:100:3910:-239.018,0,-872.247 dDocent_Contig_3701 107 . N A 160.075 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=167;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:132:-12.2066,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_3702 98 . N A 206.982 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=207;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_3703 1 . N A 96612.1 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=3139;CIGAR=1X;DP=3139;DPB=3139;DPRA=0;EPP=6819.26;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=53.1211;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.681427;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=114258;QR=0;RO=0;RPL=0;RPP=6819.26;RPPR=0;RPR=3139;RUN=1;SAF=3139;SAP=6819.26;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:369:0,369:0:0:369:13385:-1116.23,-111.08,0 1/1:780:0,780:0:0:780:28375:-2445.13,-234.803,0 1/1:474:0,474:0:0:474:17271:-1449.86,-142.688,0 1/1:544:0,544:0:0:544:19883:-1730.58,-163.76,0 1/1:490:0,490:0:0:490:17758:-1499.94,-147.505,0 1/1:482:0,482:0:0:482:17586:-1418.69,-145.096,0 dDocent_Contig_3705 27 . G A 694.086 . AB=0.107692;ABP=1132.61;AC=3;AF=0.25;AN=12;AO=117;CIGAR=1X;DP=1347;DPB=1347;DPRA=0;EPP=257.073;EPPR=2671.75;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994304;PAO=0;PQA=0;PQR=0;PRO=0;QA=4684;QR=48854;RO=1229;RPL=0;RPP=257.073;RPPR=2671.75;RPR=117;RUN=1;SAF=117;SAP=257.073;SAR=0;SRF=1229;SRP=2671.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:146:137,9:137:5464:9:359:0,-11.2776,-458.918 0/0:203:195,8:195:7806:8:319:0,-32.034,-673.038 0/0:153:144,9:144:5670:9:362:0,-13.114,-477.171 0/1:172:157,15:157:6283:15:599:-2.47265,0,-513.43 0/1:400:355,44:355:14121:44:1767:-39.0279,0,-1149.6 0/1:273:241,32:241:9510:32:1278:-33.1062,0,-773.149 dDocent_Contig_3706 23 . C T 159.62 . AB=0.109375;ABP=257.48;AC=1;AF=0.0833333;AN=12;AO=21;CIGAR=1X;DP=1577;DPB=1577;DPRA=0.693141;EPP=48.6112;EPPR=3381.82;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996787;PAO=0;PQA=0;PQR=0;PRO=0;QA=833;QR=62231;RO=1556;RPL=0;RPP=48.6112;RPPR=3381.82;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=1556;SRP=3381.82;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:271:271,0:271:10857:0:0:0,-81.5791,-976.386 0/0:431:431,0:431:17235:0:0:0,-129.744,-1549.75 0/0:283:283,0:283:11301:0:0:0,-85.1915,-1016.31 0/0:269:269,0:269:10753:0:0:0,-80.9771,-967.044 0/0:131:131,0:131:5221:0:0:0,-39.4349,-469.746 0/1:192:171,21:171:6864:21:833:-17.4849,0,-559.645 dDocent_Contig_3707 10 . C A 1172.8 . AB=0.114312;ABP=1393.28;AC=1;AF=0.0833333;AN=12;AO=183;CIGAR=1X;DP=3961;DPB=3961;DPRA=0;EPP=400.39;EPPR=8195.98;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99947;PAO=0;PQA=0;PQR=0;PRO=0;QA=7307;QR=152093;RO=3773;RPL=0;RPP=400.39;RPPR=8195.98;RPR=183;RUN=1;SAF=183;SAP=400.39;SAR=0;SRF=3773;SRP=8195.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:384:374,10:374:15088:10:406:0,-78.6949,-1319.79 0/0:439:435,4:435:17531:4:162:0,-117.185,-1561.32 0/0:297:290,7:290:11691:7:280:0,-63.8343,-1025.74 0/0:517:508,7:508:20427:7:279:0,-129.942,-1811.15 0/0:1248:1215,32:1215:48989:32:1262:0,-261.943,-4290.23 0/1:1076:951,123:951:38367:123:4918:-118.803,0,-3125.55 dDocent_Contig_3708 8 . C G 351.789 . AB=0.135135;ABP=259.714;AC=1;AF=0.0833333;AN=12;AO=30;CIGAR=1X;DP=1156;DPB=1156;DPRA=1.18844;EPP=68.1545;EPPR=2448.09;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997336;PAO=0;PQA=0;PQR=0;PRO=0;QA=1147;QR=43426;RO=1126;RPL=0;RPP=68.1545;RPPR=2448.09;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=1126;SRP=2448.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:118:118,0:118:4549:0:0:0,-35.5215,-409.456 0/0:220:220,0:220:8481:0:0:0,-66.2266,-763.033 0/0:175:175,0:175:6725:0:0:0,-52.6802,-605.131 0/1:222:192,30:192:7408:30:1147:-36.7018,0,-599.719 0/0:137:137,0:137:5258:0:0:0,-41.2411,-473.218 0/0:284:284,0:284:11005:0:0:0,-85.4925,-989.997 dDocent_Contig_3709 98 . N A 5932.02 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=200;CIGAR=1X;DP=200;DPB=200;DPRA=0;EPP=437.305;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6562;QR=0;RO=0;RPL=200;RPP=437.305;RPPR=0;RPR=0;RUN=1;SAF=200;SAP=437.305;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:33:0,33:0:0:33:1114:-100.564,-9.93399,0 1/1:70:0,70:0:0:70:2302:-207.443,-21.0721,0 1/1:19:0,19:0:0:19:638:-57.7372,-5.71957,0 1/1:28:0,28:0:0:28:929:-83.915,-8.42884,0 1/1:31:0,31:0:0:31:976:-88.1282,-9.33193,0 1/1:19:0,19:0:0:19:603:-54.5701,-5.71957,0 dDocent_Contig_3711 30 . C A 45.3901 . AB=0.135135;ABP=45.7942;AC=2;AF=0.166667;AN=12;AO=5;CIGAR=1X;DP=136;DPB=136;DPRA=0.747475;EPP=13.8677;EPPR=287.473;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.816794;PAO=0;PQA=0;PQR=0;PRO=0;QA=201;QR=5241;RO=131;RPL=0;RPP=13.8677;RPPR=287.473;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=131;SRP=287.473;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:32,0:32:1271:0:0:0,-9.63296,-114.652 0/0:15:15,0:15:604:0:0:0,-4.51545,-54.6975 0/0:18:18,0:18:715:0:0:0,-5.41854,-64.6725 0/0:34:34,0:34:1371:0:0:0,-10.235,-123.644 0/1:20:17,3:17:691:3:122:-5.35189,0,-56.4971 0/1:17:15,2:15:589:2:79:-2.37973,0,-48.224 dDocent_Contig_3712 142 . C T 43.5095 . AB=0.126984;ABP=79.1497;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X4M;DP=227;DPB=227;DPRA=1.52222;EPP=24.725;EPPR=467.705;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.939252;PAO=0;PQA=0;PQR=0;PRO=0;QA=341;QR=7185;RO=214;RPL=0;RPP=24.725;RPPR=467.705;RPR=10;RUN=1;SAF=0;SAP=24.725;SAR=10;SRF=0;SRP=467.705;SRR=214;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:14:14,0,0:14:466:0,0:0,0:0,-4.21442,-42.2595,-4.21442,-42.2595,-42.2595 0|0:74:72,0,2:72:2416:0,2:0,61:0,-21.6742,-217.397,-16.4821,-212.511,-211.909 0|0:42:41,0,0:41:1355:0,0:0,0:0,-12.3422,-121.892,-12.3422,-121.892,-121.892 0|1:29:24,2,3:24:805:2,3:67,105:-1.32747,-3.13209,-67.7191,0,-59.7763,-64.2993 0|1:34:29,0,5:29:987:0,5:0,175:-5.85867,-14.5885,-94.6499,0,-80.4098,-78.9047 0|0:34:34,0,0:34:1156:0,0:0,0:0,-10.235,-104.344,-10.235,-104.344,-104.344 dDocent_Contig_3714 40 . G A 2724.49 . AB=0.193265;ABP=561.174;AC=5;AF=0.416667;AN=12;AO=133;CIGAR=1X1M;DP=795;DPB=795;DPRA=0;EPP=291.816;EPPR=1303.72;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=5.55112e-17;PAIRED=0.984962;PAIREDR=0.96828;PAO=0;PQA=0;PQR=0;PRO=0;QA=5245;QR=22886;RO=599;RPL=0;RPP=291.816;RPPR=1303.72;RPR=133;RUN=1;SAF=133;SAP=291.816;SAR=0;SRF=599;SRP=1303.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:104:61,9,34:61:2339:9,34:351,1325:-90.5195,-80.0343,-269.286,0,-163.11,-181.724 0|1:158:86,23,49:86:3287:23,49:921,1927:-132.603,-82.6173,-345.374,0,-193.797,-254.922 0|1:79:58,9,12:58:2225:9,12:360,480:-22.0789,-9.88387,-189.774,0,-152.942,-178.986 0|1:162:134,5,23:134:5152:5,23:191,909:-34.4687,-59.1382,-480.553,0,-407.26,-416.007 0|0:112:106,5,1:106:4026:5,1:180,40:0,-17.2611,-345.852,-28.6075,-344.062,-358.441 0|1:180:154,12,14:154:5857:12,14:472,564:-0.131955,-7.67437,-484.352,0,-441.477,-476.084 dDocent_Contig_3715 23 . T C 76509.5 . AB=0.481462;ABP=20.1587;AC=6;AF=0.5;AN=12;AO=2766;CIGAR=1X;DP=5745;DPB=5745;DPRA=0;EPP=6009.3;EPPR=6452.28;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=104393;QR=117268;RO=2970;RPL=0;RPP=6009.3;RPPR=6452.28;RPR=2766;RUN=1;SAF=2766;SAP=6009.3;SAR=0;SRF=2970;SRP=6452.28;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:848:416,429:416:16477:429:16024:-1186.74,0,-1227.1 0/1:955:630,323:630:24817:323:12111:-802.465,0,-1944.48 0/1:744:435,309:435:17339:309:11730:-831.172,0,-1335.17 0/1:1009:380,627:380:14885:627:23364:-1798.15,0,-1035.32 0/1:896:420,476:420:16596:476:18198:-1367.01,0,-1222.66 0/1:1293:689,602:689:27154:602:22966:-1676.63,0,-2052.72 dDocent_Contig_3716 9 . A T 336.441 . AB=0.144928;ABP=229.693;AC=5;AF=0.416667;AN=12;AO=30;CIGAR=1X;DP=232;DPB=232;DPRA=1.656;EPP=68.1545;EPPR=439.476;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0;PAIREDR=0.40796;PAO=0;PQA=0;PQR=0;PRO=0;QA=1140;QR=7607;RO=201;RPL=0;RPP=68.1545;RPPR=439.476;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=201;SRP=439.476;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:33,5:33:1202:5:192:-6.21087,0,-97.0288 0/1:44:40,4:40:1518:4:156:-1.17197,0,-123.641 0/0:25:25,0:25:960:0:0:0,-7.52575,-86.7148 0/1:40:34,6:34:1295:6:229:-8.93454,0,-104.797 0/1:38:29,9:29:1101:9:329:-18.5158,0,-87.9546 0/1:47:40,6:40:1531:6:234:-7.19407,0,-123.826 dDocent_Contig_3717 11 . T C 545.902 . AB=0.114723;ABP=677.325;AC=3;AF=0.25;AN=12;AO=83;CIGAR=1X;DP=1217;DPB=1217;DPRA=0;EPP=183.243;EPPR=2458.95;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.987952;PAIREDR=0.994695;PAO=0;PQA=0;PQR=0;PRO=0;QA=3297;QR=44897;RO=1131;RPL=0;RPP=183.243;RPPR=2458.95;RPR=83;RUN=1;SAF=83;SAP=183.243;SAR=0;SRF=1131;SRP=2458.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:209:206,3:206:8080:3:92:0,-54.3387,-718.212 0/0:288:275,13:275:10961:13:531:0,-38.5603,-937.618 0/1:140:128,12:128:5111:12:480:-1.40587,0,-417.707 0/0:197:190,7:190:7527:7:283:0,-33.4599,-651.224 0/1:172:141,28:141:5592:28:1105:-48.4537,0,-451.835 0/1:211:191,20:191:7626:20:806:-9.34024,0,-622.44 dDocent_Contig_3718 11 . T C 46181.7 . AB=0.658667;ABP=495.014;AC=6;AF=0.5;AN=12;AO=1482;CIGAR=1X;DP=2250;DPB=2250;DPRA=0;EPP=3177.85;EPPR=1668.53;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0.992578;PAIREDR=0.994785;PAO=0;PQA=0;PQR=0;PRO=0;QA=59006;QR=30568;RO=767;RPL=0;RPP=3221.13;RPPR=1668.53;RPR=1482;RUN=1;SAF=1477;SAP=3177.85;SAR=5;SRF=767;SRP=1668.53;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:405:128,276:128:5064:276:11023:-869.303,0,-333.629 0/1:368:173,195:173:6885:195:7769:-588.027,0,-508.565 0/1:337:104,233:104:4137:233:9283:-733.443,0,-270.843 0/1:471:138,333:138:5508:333:13214:-1046.52,0,-353.76 0/1:342:95,247:95:3792:247:9786:-777.185,0,-238.338 0/1:327:129,198:129:5182:198:7931:-614.91,0,-367.791 dDocent_Contig_3719 98 . N C 663.621 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=23;CIGAR=1X;DP=23;DPB=23;DPRA=0;EPP=52.9542;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=709;QR=0;RO=0;RPL=23;RPP=52.9542;RPPR=0;RPR=0;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:5:0,5:0:0:5:174:-16.002,-1.50515,0 1/1:4:0,4:0:0:4:139:-12.8527,-1.20412,0 1/1:2:0,2:0:0:2:54:-5.12892,-0.60206,0 1/1:4:0,4:0:0:4:138:-12.7604,-1.20412,0 1/1:2:0,2:0:0:2:43:-4.08484,-0.60206,0 1/1:6:0,6:0:0:6:161:-14.7546,-1.80618,0 dDocent_Contig_3721 17 . A T 13491 . AB=0.270729;ABP=917.072;AC=4;AF=0.333333;AN=12;AO=568;CIGAR=1X;DP=2962;DPB=2962;DPRA=0;EPP=1236.41;EPPR=5195;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=22832;QR=95735;RO=2391;RPL=0;RPP=1236.41;RPPR=5195;RPR=568;RUN=1;SAF=568;SAP=1236.41;SAR=0;SRF=2391;SRP=5195;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:513:373,140:373:14879:140:5610:-350.28,0,-1183.53 0/1:540:384,154:384:15399:154:6175:-393.181,0,-1222.38 0/1:515:379,135:379:15196:135:5433:-333.645,0,-1211.3 0/1:434:321,113:321:12857:113:4555:-279.214,0,-1025.52 0/0:486:471,15:471:18828:15:611:0,-90.9731,-1637.62 0/0:474:463,11:463:18576:11:448:0,-102.012,-1629.57 dDocent_Contig_3722 25 . T C 148.879 . AB=0.11;ABP=267.235;AC=1;AF=0.0833333;AN=12;AO=40;CIGAR=1X;DP=735;DPB=735;DPRA=1.1048;EPP=89.8692;EPPR=1512.18;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997122;PAO=0;PQA=0;PQR=0;PRO=0;QA=1548;QR=27536;RO=695;RPL=0;RPP=89.8692;RPPR=1512.18;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=695;SRP=1512.18;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:82:79,3:79:3168:3:113:0,-14.1475,-274.648 0/0:115:106,9:106:4146:9:363:0,-1.58379,-340.094 0/1:200:178,22:178:7072:22:848:-16.4108,0,-575.929 0/0:109:103,6:103:4011:6:224:0,-12.2972,-340.465 0/0:101:101,0:101:4011:0:0:0,-30.404,-360.976 0/0:128:128,0:128:5128:0:0:0,-38.5318,-461.386 dDocent_Contig_3723 25 . T C 4086.69 . AB=0.45;ABP=9.95901;AC=6;AF=0.5;AN=12;AO=144;CIGAR=1X;DP=320;DPB=320;DPRA=0;EPP=315.702;EPPR=385.189;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5716;QR=6993;RO=176;RPL=0;RPP=315.702;RPPR=385.189;RPR=144;RUN=1;SAF=144;SAP=315.702;SAR=0;SRF=176;SRP=385.189;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:11,25:11:428:25:999:-79.3674,0,-28.0319 0/1:63:37,26:37:1477:26:1047:-75.5534,0,-114.217 0/1:19:10,9:10:406:9:351:-26.2262,0,-31.1808 0/1:47:24,23:24:960:23:908:-67.8787,0,-72.5523 0/1:95:68,27:68:2687:27:1045:-65.7366,0,-213.367 0/1:60:26,34:26:1035:34:1366:-105.128,0,-75.3812 dDocent_Contig_3724 36 . T A 1269.53 . AB=0.216912;ABP=192.344;AC=2;AF=0.166667;AN=12;AO=59;CIGAR=1X;DP=1286;DPB=1286;DPRA=0.536489;EPP=131.127;EPPR=2667.41;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997555;PAO=0;PQA=0;PQR=0;PRO=0;QA=2350;QR=48982;RO=1227;RPL=0;RPP=131.127;RPPR=2667.41;RPR=59;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=1227;SRP=2667.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:231:231,0:231:9231:0:0:0,-69.5379,-830.233 0/0:415:415,0:415:16560:0:0:0,-124.927,-1489.04 0/0:181:181,0:181:7214:0:0:0,-54.4864,-648.901 0/0:187:187,0:187:7481:0:0:0,-56.2926,-672.907 0/1:164:134,30:134:5354:30:1200:-58.9073,0,-432.319 0/1:108:79,29:79:3142:29:1150:-71.268,0,-250.331 dDocent_Contig_3725 41 . T C 7486.31 . AB=0.405286;ABP=56.0727;AC=6;AF=0.5;AN=12;AO=276;CIGAR=1X1M1X1M2X;DP=681;DPB=681;DPRA=0;EPP=602.337;EPPR=878.114;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.962779;PAO=0;PQA=0;PQR=0;PRO=0;QA=10706;QR=15460;RO=403;RPL=0;RPP=602.337;RPPR=878.114;RPR=276;RUN=1;SAF=276;SAP=602.337;SAR=0;SRF=403;SRP=878.114;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:101:42,58:42:1605:58:2233:-170.763,0,-114.31 0|1:114:93,21:93:3515:21:810:-38.9029,0,-282.153 0|1:47:16,31:16:621:31:1220:-95.9326,0,-42.0782 0|1:54:26,28:26:1010:28:1089:-82.052,0,-74.9517 0|1:201:131,70:131:5049:70:2703:-182.921,0,-393.896 0|1:164:95,68:95:3660:68:2651:-189.282,0,-280.035 dDocent_Contig_3726 98 . N A 2191.66 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=77;CIGAR=1X;DP=77;DPB=77;DPRA=0;EPP=170.214;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2407;QR=0;RO=0;RPL=77;RPP=170.214;RPPR=0;RPR=0;RUN=1;SAF=77;SAP=170.214;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:41:0,41:0:0:41:1327:-119.717,-12.3422,0 1/1:6:0,6:0:0:6:181:-16.5861,-1.80618,0 1/1:12:0,12:0:0:12:366:-33.2361,-3.61236,0 1/1:6:0,6:0:0:6:173:-15.8554,-1.80618,0 1/1:6:0,6:0:0:6:179:-16.4052,-1.80618,0 1/1:6:0,6:0:0:6:181:-16.5887,-1.80618,0 dDocent_Contig_3727 12 . G A 3867.49 . AB=0.397222;ABP=36.0408;AC=6;AF=0.5;AN=12;AO=143;CIGAR=1X;DP=360;DPB=360;DPRA=0;EPP=313.531;EPPR=474.22;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.447552;PAIREDR=0.488479;PAO=0;PQA=0;PQR=0;PRO=0;QA=5606;QR=8642;RO=217;RPL=0;RPP=313.531;RPPR=474.22;RPR=143;RUN=1;SAF=143;SAP=313.531;SAR=0;SRF=217;SRP=474.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:67:38,29:38:1527:29:1142:-82.8885,0,-117.495 0/1:66:32,34:32:1261:34:1321:-99.2928,0,-93.8896 0/1:62:41,21:41:1633:21:794:-53.1,0,-128.537 0/1:54:44,10:44:1741:10:404:-20.4642,0,-140.654 0/1:46:23,23:23:916:23:924:-69.6143,0,-68.8989 0/1:65:39,26:39:1564:26:1021:-72.6106,0,-121.431 dDocent_Contig_3728 150 . G A 1147.42 . AB=0.18806;ABP=286.151;AC=6;AF=0.5;AN=12;AO=63;CIGAR=1X;DP=335;DPB=335;DPRA=0;EPP=139.813;EPPR=593.651;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.952381;PAIREDR=0.845588;PAO=0;PQA=0;PQR=0;PRO=0;QA=2493;QR=10696;RO=272;RPL=0;RPP=139.813;RPPR=593.651;RPR=63;RUN=1;SAF=0;SAP=139.813;SAR=63;SRF=0;SRP=593.651;SRR=272;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:55:46,9:46:1791:9:332:-13.6567,0,-144.846 0/1:48:43,5:43:1706:5:197:-3.65535,0,-139.315 0/1:50:38,12:38:1481:12:489:-29.3098,0,-118.479 0/1:53:48,5:48:1890:5:192:-1.69215,0,-154.35 0/1:50:40,10:40:1569:10:403:-21.5789,0,-126.389 0/1:79:57,22:57:2259:22:880:-55.7275,0,-179.705 dDocent_Contig_3729 26 . C A 153477 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=4473;CIGAR=1X;DP=4621;DPB=4621;DPRA=0;EPP=9716.01;EPPR=320.045;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999776;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=176465;QR=5756;RO=146;RPL=0;RPP=9716.01;RPPR=320.045;RPR=4473;RUN=1;SAF=4473;SAP=9716.01;SAR=0;SRF=146;SRP=320.045;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:785:18,767:18:712:767:30190:-2650.14,-171.908,0 1/1:745:15,728:15:602:728:28739:-2529.51,-169.555,0 1/1:631:10,621:10:407:621:24563:-2171.61,-152.959,0 1/1:657:19,638:19:746:638:25193:-2197.79,-130.317,0 1/1:958:51,907:51:2002:907:35761:-3035,-108.019,0 1/1:845:33,812:33:1287:812:32019:-2762.87,-138.283,0 dDocent_Contig_3730 8 . C A 64.4031 . AB=0.108333;ABP=162.903;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1X;DP=490;DPB=490;DPRA=1.46102;EPP=52.9542;EPPR=1017.09;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.987152;PAO=0;PQA=0;PQR=0;PRO=0;QA=876;QR=17959;RO=467;RPL=0;RPP=52.9542;RPPR=1017.09;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=467;SRP=1017.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:61:60,1:60:2298:1:38:0,-14.5656,-203.24 0/1:56:49,7:49:1878:7:271:-7.89863,0,-152.41 0/0:175:170,5:170:6517:5:190:0,-35.2131,-568.972 0/1:64:58,6:58:2255:6:232:-1.98301,0,-183.898 0/0:75:71,4:71:2739:4:145:0,-9.17301,-233.286 0/0:59:59,0:59:2272:0:0:0,-17.7608,-204.697 dDocent_Contig_3731 61 . T C 367.247 . AB=0.138462;ABP=224.4;AC=1;AF=0.0833333;AN=12;AO=29;CIGAR=1X;DP=1137;DPB=1137;DPRA=1.36875;EPP=65.983;EPPR=2406.83;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99458;PAO=0;PQA=0;PQR=0;PRO=0;QA=1118;QR=40236;RO=1107;RPL=29;RPP=65.983;RPPR=2406.83;RPR=0;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=1107;SRP=2406.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:141:141,0:141:5118:0:0:0,-42.4452,-460.658 0/0:223:222,1:222:8040:1:7:0,-66.4297,-722.758 0/0:239:237,1:237:8681:1:37:0,-68.1672,-777.556 0/0:198:198,0:198:7202:0:0:0,-59.6039,-648.105 0/1:195:168,27:168:6115:27:1074:-38.2476,0,-491.639 0/0:141:141,0:141:5080:0:0:0,-42.4452,-457.247 dDocent_Contig_3732 39 . C A 990.332 . AB=0.137457;ABP=667.451;AC=3;AF=0.25;AN=12;AO=103;CIGAR=1X;DP=1297;DPB=1297;DPRA=0.958036;EPP=226.672;EPPR=2595.75;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999162;PAO=0;PQA=0;PQR=0;PRO=0;QA=3979;QR=46295;RO=1194;RPL=0;RPP=226.672;RPPR=2595.75;RPR=103;RUN=1;SAF=103;SAP=226.672;SAR=0;SRF=1194;SRP=2595.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:236:196,40:196:7637:40:1542:-67.9967,0,-616.028 0/1:156:139,17:139:5414:17:671:-13.7639,0,-440.224 0/1:190:167,23:167:6482:23:882:-22.4945,0,-526.025 0/0:263:241,22:241:9304:22:845:0,-2.80406,-760.593 0/0:224:224,0:224:8709:0:0:0,-67.4307,-783.462 0/0:228:227,1:227:8749:1:39:0,-64.7383,-783.161 dDocent_Contig_3733 11 . C T 1053.04 . AB=0.107519;ABP=1782.53;AC=3;AF=0.25;AN=12;AO=176;CIGAR=1X;DP=2970;DPB=2970;DPRA=0;EPP=385.189;EPPR=6065.76;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999642;PAO=0;PQA=0;PQR=0;PRO=0;QA=6978;QR=111993;RO=2792;RPL=0;RPP=385.189;RPPR=6065.76;RPR=176;RUN=1;SAF=176;SAP=385.189;SAR=0;SRF=2792;SRP=6065.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:491:439,52:439:17628:52:2086:-40.108,0,-1437.22 0/1:503:443,60:443:17736:60:2364:-61.5095,0,-1443.33 0/1:336:304,31:304:12173:31:1221:-8.90847,0,-993.43 0/0:406:384,21:384:15367:21:828:0,-47.4782,-1306.98 0/0:647:636,11:636:25568:11:441:0,-154.721,-2258.73 0/0:587:586,1:586:23521:1:38:0,-172.907,-2110.98 dDocent_Contig_3734 17 . A C 5631.18 . AB=0.284173;ABP=340.448;AC=5;AF=0.416667;AN=12;AO=240;CIGAR=1X;DP=952;DPB=952;DPRA=0;EPP=524.164;EPPR=1549.1;GTI=0;LEN=1;MEANALT=1;MQM=59.9292;MQMR=59.9986;NS=6;NUMALT=1;ODDS=0;PAIRED=0.779167;PAIREDR=0.691011;PAO=0;PQA=0;PQR=0;PRO=0;QA=9260;QR=27964;RO=712;RPL=0;RPP=524.164;RPPR=1549.1;RPR=240;RUN=1;SAF=240;SAP=524.164;SAR=0;SRF=712;SRP=1549.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:118:115,3:115:4531:3:122:0,-24.149,-396.368 0/1:167:131,36:131:5158:36:1404:-76.2515,0,-413.813 0/1:128:103,25:103:4034:25:977:-49.6912,0,-324.528 0/1:174:138,36:138:5457:36:1412:-74.9576,0,-438.607 0/1:165:113,52:113:4466:52:1939:-125.045,0,-352.218 0/1:200:112,88:112:4318:88:3406:-246.395,0,-328.391 dDocent_Contig_3735 15 . T A 1705.22 . AB=0.218182;ABP=268.601;AC=5;AF=0.416667;AN=12;AO=84;CIGAR=1X;DP=509;DPB=509;DPRA=0.620968;EPP=185.414;EPPR=925.886;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.988095;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3267;QR=17034;RO=425;RPL=0;RPP=185.414;RPPR=925.886;RPR=84;RUN=1;SAF=84;SAP=185.414;SAR=0;SRF=425;SRP=925.886;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:124:124,0:124:4975:0:0:0,-37.3277,-447.634 0/1:121:108,13:108:4294:13:470:-6.19324,0,-349.997 0/1:105:75,30:75:3023:30:1183:-75.1397,0,-240.539 0/1:79:63,16:63:2544:16:615:-31.895,0,-205.307 0/1:41:23,18:23:918:18:727:-53.4136,0,-70.5804 0/1:39:32,7:32:1280:7:272:-13.1026,0,-103.723 dDocent_Contig_3737 8 . C A 57.6012 . AB=0.102941;ABP=189.246;AC=1;AF=0.0833333;AN=12;AO=37;CIGAR=1X;DP=1013;DPB=1013;DPRA=1.01647;EPP=83.3548;EPPR=2122.37;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.895492;PAO=0;PQA=0;PQR=0;PRO=0;QA=1409;QR=37568;RO=976;RPL=0;RPP=83.3548;RPPR=2122.37;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=976;SRP=2122.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:157:157,0:157:6042:0:0:0,-47.2617,-543.711 0/0:224:213,11:213:8190:11:414:0,-29.822,-699.261 0/0:151:148,3:148:5710:3:113:0,-34.9166,-503.32 0/0:177:177,0:177:6847:0:0:0,-53.2823,-616.098 0/1:136:122,14:122:4690:14:532:-7.28299,0,-381.196 0/0:168:159,9:159:6089:9:350:0,-18.7117,-516.075 dDocent_Contig_3738 151 . T G 497.616 . AB=0.259259;ABP=57.3775;AC=3;AF=0.25;AN=12;AO=32;CIGAR=1X;DP=215;DPB=215;DPRA=0.902564;EPP=72.4974;EPPR=400.39;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.90625;PAIREDR=0.885246;PAO=0;PQA=0;PQR=0;PRO=0;QA=1099;QR=6258;RO=183;RPL=0;RPP=72.4974;RPPR=400.39;RPR=32;RUN=1;SAF=0;SAP=72.4974;SAR=32;SRF=0;SRP=400.39;SRR=183;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:20,2:20:655:2:68:0,-0.164784,-52.7993 0/1:60:46,14:46:1572:14:475:-25.0131,0,-123.709 0/1:33:23,10:23:791:10:346:-21.5405,0,-61.5743 0/0:46:44,2:44:1510:2:70:0,-7.19998,-129.546 0/1:15:11,4:11:381:4:140:-8.42948,0,-30.1077 0/0:39:39,0:39:1349:0:0:0,-11.7402,-121.707 dDocent_Contig_3739 24 . T C 159.874 . AB=0.142857;ABP=96.0734;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=223;DPB=223;DPRA=0.94359;EPP=35.5824;EPPR=454.677;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.933333;PAIREDR=0.841346;PAO=0;PQA=0;PQR=0;PRO=0;QA=601;QR=7855;RO=208;RPL=0;RPP=35.5824;RPPR=454.677;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=208;SRP=454.677;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:40:34,6:34:1292:6:241:-10.0251,0,-104.523 0/0:27:26,1:26:986:1:41:0,-4.03324,-84.9471 0/1:44:38,6:38:1459:6:245:-9.18415,0,-118.339 0/0:42:41,1:41:1515:1:36:0,-9.04498,-133.025 0/0:31:30,1:30:1120:1:38:0,-5.53466,-97.2945 0/0:39:39,0:39:1483:0:0:0,-11.7402,-133.744 dDocent_Contig_3741 22 . T A 90.6155 . AB=0.148936;ABP=53.3238;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=1X;DP=139;DPB=139;DPRA=1.02174;EPP=18.2106;EPPR=289.645;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=54.4697;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.878788;PAO=0;PQA=0;PQR=0;PRO=0;QA=285;QR=5262;RO=132;RPL=0;RPP=18.2106;RPPR=289.645;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=132;SRP=289.645;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1061:0:0:0,-8.12781,-79.1779 0/1:14:11,3:11:449:3:123:-7.25037,0,-36.5512 0/0:31:31,0:31:1232:0:0:0,-9.33193,-106.733 0/0:15:15,0:15:598:0:0:0,-4.51545,-38.5784 0/1:33:29,4:29:1174:4:162:-5.03297,0,-96.0015 0/0:19:19,0:19:748:0:0:0,-5.71957,-67.6421 dDocent_Contig_3742 70 . G A 1526.56 . AB=0.169492;ABP=506.829;AC=3;AF=0.25;AN=12;AO=90;CIGAR=1X;DP=1046;DPB=1046;DPRA=1.03107;EPP=198.443;EPPR=2076.77;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3521;QR=37617;RO=955;RPL=90;RPP=198.443;RPPR=2076.77;RPR=0;RUN=1;SAF=90;SAP=198.443;SAR=0;SRF=955;SRP=2076.77;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:184:138,46:138:5457:46:1808:-107.54,0,-435.597 0/1:194:173,21:173:6854:21:816:-15.3575,0,-558.173 0/1:153:130,23:130:5078:23:897:-34.9797,0,-410.851 0/0:204:204,0:204:8009:0:0:0,-61.4101,-720.413 0/0:101:101,0:101:3912:0:0:0,-30.404,-352.097 0/0:210:209,0:209:8307:0:0:0,-62.9153,-746.787 dDocent_Contig_3743 29 . A G 2943.18 . AB=0.349206;ABP=77.6676;AC=6;AF=0.5;AN=12;AO=132;CIGAR=1X;DP=378;DPB=378;DPRA=0;EPP=167.516;EPPR=39.1662;GTI=0;LEN=1;MEANALT=1;MQM=50.6439;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.69697;PAIREDR=0.674797;PAO=0;PQA=0;PQR=0;PRO=0;QA=5180;QR=9007;RO=246;RPL=0;RPP=289.645;RPPR=537.193;RPR=132;RUN=1;SAF=116;SAP=167.516;SAR=16;SRF=91;SRP=39.1662;SRR=155;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:80:52,28:52:1939:28:1101:-60.2525,0,-150.666 0/1:67:51,16:51:1866:16:610:-27.9502,0,-148.022 0/1:50:32,18:32:1128:18:729:-40.2979,0,-86.7627 0/1:45:28,17:28:1007:17:666:-36.2897,0,-77.3822 0/1:50:27,23:27:999:23:887:-64.3392,0,-75.1651 0/1:86:56,30:56:2068:30:1187:-76.4105,0,-160.458 dDocent_Contig_3744 18 . T A 7225.94 . AB=0.238095;ABP=803.767;AC=2;AF=0.166667;AN=12;AO=345;CIGAR=1X;DP=3005;DPB=3005;DPRA=0.913452;EPP=752.168;EPPR=5776.96;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999248;PAO=0;PQA=0;PQR=0;PRO=0;QA=13555;QR=105227;RO=2659;RPL=0;RPP=752.168;RPPR=5776.96;RPR=345;RUN=1;SAF=345;SAP=752.168;SAR=0;SRF=2659;SRP=5776.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:293:292,1:292:11548:1:24:0,-85.8019,-1036.15 0/0:475:475,0:475:18790:0:0:0,-142.989,-1689.62 0/0:305:281,24:281:11159:24:966:0,-4.57316,-916.332 0/0:588:587,0:587:23108:0:0:0,-176.705,-2077.54 0/1:775:610,165:610:24248:165:6507:-352.076,0,-1946.98 0/1:569:414,155:414:16374:155:6058:-373.739,0,-1301.14 dDocent_Contig_3745 123 . A G 293.305 . AB=0.164474;ABP=151.642;AC=5;AF=0.416667;AN=12;AO=26;CIGAR=1X;DP=179;DPB=179;DPRA=0;EPP=59.4686;EPPR=335.246;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.923077;PAIREDR=0.921569;PAO=0;PQA=0;PQR=0;PRO=0;QA=939;QR=5452;RO=153;RPL=0;RPP=59.4686;RPPR=335.246;RPR=26;RUN=1;SAF=0;SAP=59.4686;SAR=26;SRF=0;SRP=335.246;SRR=153;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:22,8:22:760:8:297:-18.0531,0,-59.679 0/1:24:21,3:21:729:3:100:-2.10367,0,-58.697 0/0:27:26,1:26:937:1:39:0,-4.23125,-80.7495 0/1:36:29,7:29:1047:7:251:-12.0998,0,-83.7036 0/1:20:17,3:17:613:3:110:-4.23997,0,-49.482 0/1:42:38,4:38:1366:4:142:-0.485946,0,-110.596 dDocent_Contig_3746 1 . N G 155.645 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=161;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:38:-3.79727,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:123:-11.4648,-0.90309,0 dDocent_Contig_3747 8 . C T 536.641 . AB=0.0895522;ABP=101.051;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1M1X2M;DP=378;DPB=360.5;DPRA=1.14857;EPP=16.0391;EPPR=728.282;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=234;QR=12821;RO=334;RPL=0;RPP=16.0391;RPPR=728.282;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=334;SRP=728.282;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:68:63,5,0:63:2422:5,0:192,0:0,-2.82003,-200.538,-18.9649,-202.043,-217.804 0|0:76:53,21,0:53:2033:21,0:784,0:-48.2177,0,-160.541,-64.1723,-166.862,-231.046 0|0:60:52,8,0:52:2009:8,0:293,0:-8.65746,0,-162.984,-24.311,-165.393,-189.335 0|1:67:60,1,6:60:2298:1,6:38,234:-1.18198,-16.1287,-204.412,0,-185.478,-186.788 0|0:47:46,0,0:46:1750:0,0:0,0:0,-13.8474,-157.653,-13.8474,-157.653,-157.653 0|0:60:60,0,0:60:2309:0,0:0,0:0,-18.0618,-208.025,-18.0618,-208.025,-208.025 dDocent_Contig_3748 86 . T A 447.881 . AB=0.514286;ABP=3.07234;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=244;DPB=244;DPRA=0.837321;EPP=42.0968;EPPR=493.763;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.845133;PAO=0;PQA=0;PQR=0;PRO=0;QA=628;QR=7977;RO=226;RPL=9;RPP=3.0103;RPPR=3.16403;RPR=9;RUN=1;SAF=9;SAP=3.0103;SAR=9;SRF=115;SRP=3.16403;SRR=111;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:948:0:0:0,-8.12781,-85.6356 0/0:63:63,0:63:2191:0:0:0,-18.9649,-197.459 0/0:16:16,0:16:565:0:0:0,-4.81648,-51.1807 0/0:66:66,0:66:2356:0:0:0,-19.868,-212.297 0/0:37:37,0:37:1315:0:0:0,-11.1381,-118.647 0/1:35:17,18:17:602:18:628:-46.311,0,-43.9743 dDocent_Contig_3749 98 . N G 217.427 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=218;QR=0;RO=0;RPL=8;RPP=20.3821;RPPR=0;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:53:-5.03367,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 1/1:3:0,3:0:0:3:87:-8.1184,-0.90309,0 1/1:1:0,1:0:0:1:36:-3.59827,-0.30103,0 dDocent_Contig_3750 20 . A T 495.117 . AB=0.10462;ABP=1002.37;AC=3;AF=0.25;AN=12;AO=123;CIGAR=1X;DP=1645;DPB=1645;DPRA=0;EPP=270.101;EPPR=3301.48;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=59.9908;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996708;PAO=0;PQA=0;PQR=0;PRO=0;QA=4864;QR=59835;RO=1519;RPL=0;RPP=270.101;RPPR=3301.48;RPR=123;RUN=1;SAF=123;SAP=270.101;SAR=0;SRF=1519;SRP=3301.48;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:283:256,26:256:10110:26:1035:-8.1576,0,-824.049 0/1:296:259,37:259:10147:37:1473:-43.7183,0,-823.568 0/1:157:143,14:143:5626:14:553:-2.84742,0,-458.951 0/0:290:269,21:269:10640:21:820:0,-13.1826,-882.859 0/0:308:298,9:298:11689:9:353:0,-60.6936,-1019.15 0/0:311:294,16:294:11623:16:630:0,-36.6829,-988.247 dDocent_Contig_3751 18 . C A 3278.43 . AB=0.0426357;ABP=471.779;AC=0;AF=0;AN=12;AO=19;CIGAR=10M1X;DP=680;DPB=692.455;DPRA=0.969907;EPP=44.2683;EPPR=1130;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.986513;PAO=0;PQA=0;PQR=0;PRO=0;QA=752;QR=20273;RO=519;RPL=0;RPP=44.2683;RPPR=1130;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=519;SRP=1130;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:116:93,13,9:93:3639:13,9:476,352:-10.8878,0,-295.287,-9.93926,-270.264,-306.451 0|0:108:103,3,0:103:4005:3,0:110,0:0,-21.946,-350.289,-31.0061,-351.192,-360.181 0|0:86:83,0,3:83:3271:0,3:0,122:0,-24.9855,-294.089,-14.5161,-284.025,-283.122 0|0:75:70,0,5:70:2727:0,5:0,199:0,-21.0721,-245.196,-4.28869,-228.809,-227.304 0|0:142:72,68,2:72:2806:68,2:2564,79:-188.428,0,-210.159,-203.601,-224.128,-433.639 0|0:153:98,53,0:98:3825:53,0:1993,0:-133.749,0,-298.452,-163.249,-314.407,-477.684 dDocent_Contig_3752 98 . N A 332.693 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=12;CIGAR=1X;DP=12;DPB=12;DPRA=0;EPP=29.068;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=346;QR=0;RO=0;RPL=12;RPP=29.068;RPPR=0;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:42:-3.98934,-0.60206,0 1/1:4:0,4:0:0:4:117:-10.8201,-1.20412,0 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 1/1:2:0,2:0:0:2:63:-5.98364,-0.60206,0 1/1:2:0,2:0:0:2:55:-5.22366,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_3753 30 . T A 7690.62 . AB=0.576923;ABP=25.7272;AC=6;AF=0.5;AN=12;AO=255;CIGAR=1X;DP=442;DPB=442;DPRA=0;EPP=556.736;EPPR=406.904;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10131;QR=7450;RO=186;RPL=0;RPP=556.736;RPPR=406.904;RPR=255;RUN=1;SAF=255;SAP=556.736;SAR=0;SRF=186;SRP=406.904;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:76:25,50:25:1009:50:1977:-155.458,0,-68.4249 0/1:90:38,52:38:1529:52:2074:-159.753,0,-110.759 0/1:75:43,32:43:1719:32:1265:-91.5297,0,-132.344 0/1:81:39,42:39:1564:42:1670:-126.141,0,-116.606 0/1:45:15,30:15:608:30:1206:-95.2663,0,-41.5119 0/1:75:26,49:26:1021:49:1939:-152.136,0,-69.6061 dDocent_Contig_3754 44 . A G 6531.01 . AB=0.672026;ABP=82.9498;AC=6;AF=0.5;AN=12;AO=209;CIGAR=1X1M;DP=311;DPB=311;DPRA=0;EPP=456.848;EPPR=200.614;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.502392;PAIREDR=0.769231;PAO=0;PQA=0;PQR=0;PRO=0;QA=8381;QR=3563;RO=91;RPL=0;RPP=456.848;RPPR=200.614;RPR=209;RUN=1;SAF=209;SAP=456.848;SAR=0;SRF=91;SRP=200.614;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:69:20,0,49:20:768:0,49:0,1972:-156.904,-162.925,-225.944,0,-63.4086,-48.6581 0|1:41:12,8,21:12:475:8,21:296,850:-66.4981,-45.9114,-82.5899,0,-14.9071,-32.7838 0|1:56:14,0,42:14:545:0,42:0,1691:-135.553,-139.767,-184.548,0,-45.1729,-32.5296 0|1:49:14,0,35:14:561:0,35:0,1386:-110.247,-114.462,-160.682,0,-46.6191,-36.083 0|1:35:15,2,18:15:597:2,18:78,721:-54.8905,-52.9953,-101.547,0,-42.7515,-43.7438 0|1:61:16,0,44:16:617:0,44:0,1761:-140.23,-145.046,-195.704,0,-50.6383,-37.393 dDocent_Contig_3755 104 . N C 3238.2 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=104;CIGAR=3X;DP=104;DPB=104;DPRA=0;EPP=228.843;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3567;QR=0;RO=0;RPL=0;RPP=228.843;RPPR=0;RPR=104;RUN=1;SAF=0;SAP=228.843;SAR=104;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:24:0,24:0:0:24:818:-73.9342,-7.22472,0 1|1:36:0,36:0:0:36:1225:-110.548,-10.8371,0 1|1:9:0,9:0:0:9:310:-28.2343,-2.70927,0 1|1:14:0,14:0:0:14:481:-43.6167,-4.21442,0 1|1:9:0,9:0:0:9:315:-28.6886,-2.70927,0 1|1:12:0,12:0:0:12:418:-37.9534,-3.61236,0 dDocent_Contig_3756 28 . C A 285.167 . AB=0.103865;ABP=567.299;AC=1;AF=0.0833333;AN=12;AO=72;CIGAR=1X;DP=2779;DPB=2779;DPRA=1.0355;EPP=159.356;EPPR=5881.19;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998153;PAO=0;PQA=0;PQR=0;PRO=0;QA=2883;QR=108742;RO=2707;RPL=0;RPP=159.356;RPPR=5881.19;RPR=72;RUN=1;SAF=72;SAP=159.356;SAR=0;SRF=2707;SRP=5881.19;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:426:426,0:426:17081:0:0:0,-128.239,-1535.85 0/0:610:610,0:610:24467:0:0:0,-183.628,-2199.78 0/0:273:273,0:273:11029:0:0:0,-82.1812,-991.801 0/0:522:522,0:522:20970:0:0:0,-157.138,-1885.45 0/0:534:505,29:505:20253:29:1167:0,-55.441,-1715.71 0/1:414:371,43:371:14942:43:1716:-30.0395,0,-1218.94 dDocent_Contig_3757 24 . T C 1779.48 . AB=0.261818;ABP=138.518;AC=1;AF=0.0833333;AN=12;AO=103;CIGAR=1X;DP=1867;DPB=1867;DPRA=1.13199;EPP=226.672;EPPR=3811.78;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997725;PAO=0;PQA=0;PQR=0;PRO=0;QA=4146;QR=69897;RO=1758;RPL=0;RPP=226.672;RPPR=3820.46;RPR=103;RUN=1;SAF=103;SAP=226.672;SAR=0;SRF=1757;SRP=3811.78;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:282:268,8:268:10655:8:312:0,-55.0208,-929.813 0/0:413:396,17:396:15766:17:678:0,-62.9746,-1356.34 0/1:275:203,72:203:8109:72:2913:-179.471,0,-646.573 0/0:325:319,6:319:12656:6:243:0,-75.5868,-1115.87 0/0:225:225,0:225:8965:0:0:0,-67.7317,-806.314 0/0:347:347,0:347:13746:0:0:0,-104.457,-1236.11 dDocent_Contig_3758 98 . N C 97.0363 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=2X;DP=3;DPB=5;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=104;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:3:0,3:0:0:3:104:-9.70309,-0.90309,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_3759 15 . A T 125.053 . AB=0.110294;ABP=182.412;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1X;DP=845;DPB=845;DPRA=0.869469;EPP=44.2683;EPPR=1794.48;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=769;QR=32963;RO=825;RPL=0;RPP=44.2683;RPPR=1794.48;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=825;SRP=1794.48;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:105:103,2:103:4126:2:80:0,-24.0164,-363.719 0/0:152:150,2:150:5959:2:82:0,-37.9769,-528.313 0/0:180:179,0:179:7146:0:0:0,-53.8844,-642.42 0/0:105:105,0:105:4202:0:0:0,-31.6081,-378.139 0/0:167:167,0:167:6680:0:0:0,-50.272,-600.905 0/1:136:121,15:121:4850:15:607:-14.0282,0,-395.456 dDocent_Contig_3760 7 . C A 38747.5 . AB=0.431301;ABP=138.165;AC=6;AF=0.5;AN=12;AO=1422;CIGAR=1X;DP=3297;DPB=3297;DPRA=0;EPP=3090.84;EPPR=4061.49;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99893;PAO=0;PQA=0;PQR=0;PRO=0;QA=54213;QR=71717;RO=1869;RPL=0;RPP=3090.84;RPPR=4061.49;RPR=1422;RUN=1;SAF=1422;SAP=3090.84;SAR=0;SRF=1869;SRP=4061.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:501:232,268:232:8898:268:10227:-769.382,0,-649.865 0/1:678:300,378:300:11534:378:14385:-1089.91,0,-833.494 0/1:667:349,317:349:13405:317:12129:-890.244,0,-1004.97 0/1:609:335,272:335:12882:272:10365:-749.639,0,-975.945 0/1:479:359,118:359:13748:118:4480:-259.452,0,-1092.89 0/1:363:294,69:294:11250:69:2627:-127.35,0,-902.788 dDocent_Contig_3761 26 . C G 33.1959 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=3;CIGAR=5M1X;DP=169;DPB=167;DPRA=1.15663;EPP=9.52472;EPPR=354.789;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9691;NS=6;NUMALT=2;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.919753;PAO=0;PQA=0;PQR=0;PRO=0;QA=122;QR=6463;RO=162;RPL=0;RPP=9.52472;RPPR=354.789;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=162;SRP=354.789;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:25:25,0,0:25:1000:0,0:0,0:0,-7.52575,-90.2965,-7.52575,-90.2965,-90.2965 0|0:36:35,0,1:35:1403:0,1:0,41:0,-10.536,-126.109,-6.74251,-122.725,-122.424 0|0:28:26,0,2:26:1034:0,2:0,81:0,-7.82678,-92.9497,-0.743106,-86.27,-85.668 0|0:28:27,0,0:27:1072:0,0:0,0:0,-8.12781,-96.3709,-8.12781,-96.3709,-96.3709 0|0:22:19,3,0:19:767:3,0:123,0:-4.84213,0,-62.7292,-10.5617,-63.6323,-73.7854 0|0:30:30,0,0:30:1187:0,0:0,0:0,-9.0309,-107.11,-9.0309,-107.11,-107.11 dDocent_Contig_3762 36 . G A 133.343 . AB=0.2;ABP=34.2795;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=235;DPB=235;DPRA=1.02564;EPP=20.3821;EPPR=495.935;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.493392;PAO=0;PQA=0;PQR=0;PRO=0;QA=295;QR=8948;RO=227;RPL=0;RPP=20.3821;RPPR=495.935;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=227;SRP=495.935;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1129:0:0:0,-8.42884,-101.892 0/0:47:47,0:47:1850:0:0:0,-14.1484,-166.709 0/0:35:35,0:35:1360:0:0:0,-10.536,-122.656 0/0:37:37,0:37:1461:0:0:0,-11.1381,-131.739 0/0:48:48,0:48:1891:0:0:0,-14.4494,-170.393 0/1:40:32,8:32:1257:8:295:-14.8572,0,-101.358 dDocent_Contig_3763 8 . A G 486.668 . AB=0.184713;ABP=138.568;AC=3;AF=0.25;AN=12;AO=35;CIGAR=1X;DP=304;DPB=304;DPRA=0;EPP=79.0118;EPPR=587.136;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=51.487;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.571429;PAIREDR=0.35316;PAO=0;PQA=0;PQR=0;PRO=0;QA=1331;QR=10223;RO=269;RPL=0;RPP=79.0118;RPPR=587.136;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=269;SRP=587.136;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:42,2:42:1606:2:78:0,-5.84185,-135.309 0/1:58:50,8:50:1892:8:309:-10.7132,0,-143.944 0/1:51:45,6:45:1724:6:231:-5.80538,0,-133.209 0/1:48:33,15:33:1250:15:572:-37.37,0,-92.686 0/0:42:40,2:40:1508:2:65:0,-6.47169,-118.698 0/0:61:59,2:59:2243:2:76:0,-11.1482,-183.18 dDocent_Contig_3764 16 . C A 1887.27 . AB=0.169408;ABP=580.179;AC=1;AF=0.0833333;AN=12;AO=166;CIGAR=1X;DP=3836;DPB=3836;DPRA=1.22793;EPP=363.475;EPPR=7861.91;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994001;PAO=0;PQA=0;PQR=0;PRO=0;QA=6586;QR=146362;RO=3667;RPL=0;RPP=363.475;RPPR=7965.8;RPR=166;RUN=1;SAF=166;SAP=363.475;SAR=0;SRF=3655;SRP=7861.91;SRR=12;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:630:630,0:630:25175:0:0:0,-189.649,-2263.51 0/0:615:613,2:613:24482:2:79:0,-177.636,-2193.75 0/0:480:479,0:479:19209:0:0:0,-144.193,-1726.76 0/0:588:586,1:586:23437:1:11:0,-175.859,-2106.06 0/0:915:854,60:854:34033:60:2348:0,-64.0612,-2848.35 0/1:608:505,103:505:20026:103:4148:-190.25,0,-1617.69 dDocent_Contig_3765 209 . N G 76.8682 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_3766 13 . T G 76.6984 . AB=0.163265;ABP=51.2702;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=216;DPB=216;DPRA=0.959459;EPP=31.2394;EPPR=209.685;GTI=0;LEN=1;MEANALT=1;MQM=35.4615;MQMR=53.9015;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0;PAIREDR=0.778325;PAO=0;PQA=0;PQR=0;PRO=0;QA=516;QR=7800;RO=203;RPL=0;RPP=31.2394;RPPR=443.819;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=171;SRP=209.685;SRR=32;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:60:58,2:58:2231:2:80:0,-12.0565,-189.513 0/1:22:19,3:19:711:3:122:-3.09883,0,-42.3377 0/0:28:28,0:28:1096:0:0:0,-8.42884,-98.9357 0/0:33:30,3:30:1161:3:113:0,-0.610248,-89.5594 0/0:46:46,0:46:1759:0:0:0,-13.8474,-149.144 0/1:27:22,5:22:842:5:201:-7.78696,0,-60.3214 dDocent_Contig_3767 76 . T C 51.7758 . AB=0.123077;ABP=83.2212;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=361;DPB=361;DPRA=1.09797;EPP=20.3821;EPPR=769.54;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.6374;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.985836;PAO=0;PQA=0;PQR=0;PRO=0;QA=288;QR=12388;RO=353;RPL=8;RPP=20.3821;RPPR=769.54;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=353;SRP=769.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1149:0:0:0,-9.93399,-103.719 0/0:32:32,0:32:1099:0:0:0,-9.63296,-99.2163 0/0:24:24,0:24:844:0:0:0,-7.22472,-73.9657 0/1:65:57,8:57:2004:8:288:-6.70046,0,-158.544 0/0:108:108,0:108:3792:0:0:0,-32.5112,-341.486 0/0:99:99,0:99:3500:0:0:0,-29.802,-315.215 dDocent_Contig_3768 50 . C A 893.824 . AB=0.208738;ABP=154.803;AC=2;AF=0.166667;AN=12;AO=48;CIGAR=1X;DP=551;DPB=551;DPRA=0.920103;EPP=107.241;EPPR=1095.26;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1903;QR=20171;RO=503;RPL=48;RPP=107.241;RPPR=1095.26;RPR=0;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=503;SRP=1095.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:95:71,24:71:2839:24:967:-58.7329,0,-227.019 0/1:111:92,19:92:3725:19:744:-33.8713,0,-301.828 0/0:40:38,2:38:1507:2:80:0,-4.44941,-128.279 0/0:111:108,3:108:4356:3:112:0,-22.969,-381.526 0/0:99:99,0:99:3972:0:0:0,-29.802,-357.454 0/0:95:95,0:95:3772:0:0:0,-28.5978,-339.477 dDocent_Contig_3770 123 . A G 2015.42 . AB=0.353383;ABP=52.6766;AC=6;AF=0.5;AN=12;AO=94;CIGAR=1X;DP=266;DPB=266;DPRA=0;EPP=207.129;EPPR=376.504;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.840426;PAIREDR=0.813953;PAO=0;PQA=0;PQR=0;PRO=0;QA=3232;QR=6003;RO=172;RPL=0;RPP=207.129;RPPR=376.504;RPR=94;RUN=1;SAF=0;SAP=207.129;SAR=94;SRF=0;SRP=376.504;SRR=172;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:15,13:15:491:13:449:-32.3117,0,-36.0702 0/1:35:21,14:21:725:14:478:-32.8098,0,-55.0336 0/1:58:45,13:45:1584:13:449:-23.2808,0,-125.392 0/1:51:29,22:29:1023:22:760:-53.3676,0,-77.0305 0/1:49:33,16:33:1162:16:549:-34.9852,0,-90.1367 0/1:45:29,16:29:1018:16:547:-36.0083,0,-78.3856 dDocent_Contig_3771 35 . A G 41.0785 . AB=0.1875;ABP=16.582;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=155;DPB=155;DPRA=0.897196;EPP=16.0391;EPPR=326.56;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.926174;PAO=0;PQA=0;PQR=0;PRO=0;QA=214;QR=5396;RO=149;RPL=0;RPP=16.0391;RPPR=326.56;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=149;SRP=326.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:818:0:0:0,-7.22472,-73.9209 0/0:32:29,3:29:1060:3:102:0,-0.117267,-86.1897 0/0:18:18,0:18:647:0:0:0,-5.41854,-58.5556 0/0:29:29,0:29:1080:0:0:0,-8.72987,-97.5074 0/1:16:13,3:13:485:3:112:-5.63015,0,-39.1764 0/0:36:36,0:36:1306:0:0:0,-10.8371,-117.824 dDocent_Contig_3772 13 . T C 8239.41 . AB=0.0375635;ABP=1832.6;AC=3;AF=0.25;AN=12;AO=37;CIGAR=4M2X4M;DP=985;DPB=1032.9;DPRA=0;EPP=83.3548;EPPR=663.138;GTI=0;LEN=1;MEANALT=7.83333;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1497;QR=11930;RO=304;RPL=0;RPP=83.3548;RPPR=663.138;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=304;SRP=663.138;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:185:39,54,10,33,32,7:39:1532:54,10,33,32,7:2112,145,1265,1283,286:-158.828,0,-109.758,-163.18,-118.628,-286.175,-66.7387,-22.184,-185.362,-182.816,-64.8852,-20.3298,-183.509,-87.0683,-181.265,-146.967,-102.412,-265.585,-169.149,-167.296,-270.869 0|1:164:58,30,7,5,53,9:58:2265:30,7,5,53,9:1154,98,194,2073,366:-152.856,-77.1599,-254.333,-165.448,-258.493,-349.535,-154.375,-247.424,-335.703,-339.071,0,-93.0602,-181.347,-170.275,-170.261,-140.122,-233.172,-321.452,-310.385,-156.023,-323.616 0|0:151:71,22,8,16,18,6:71:2788:22,8,16,18,6:862,120,575,707,238:-48.9913,0,-222.705,-64.1166,-223.07,-291.015,-23.4674,-182.433,-246.53,-247.972,-12.401,-171.371,-235.469,-194.832,-236.309,-50.7701,-209.736,-273.832,-233.196,-222.135,-278.285 0|1:189:30,51,14,40,43,5:30:1177:51,14,40,43,5:1997,210,1483,1697,203:-196.675,-42.766,-124.22,-194.75,-128.62,-287.334,-84.3708,-18.2356,-170.221,-169.134,-66.1374,0,-151.989,-41.6067,-149.999,-188.962,-122.829,-274.805,-164.431,-146.199,-284.26 0|1:151:62,37,5,0,38,1:62:2439:37,5,0,38,1:1445,89,0,1540,40:-108.344,-8.79341,-198.296,-121.851,-204.274,-320.977,-127.008,-209.434,-322.482,-327.645,0,-82.4336,-195.487,-200.648,-189.209,-123.713,-206.139,-319.187,-324.35,-197.353,-324.049 0|0:145:44,57,0,0,21,9:44:1729:57,0,0,21,9:2236,0,0,808,364:-169.468,0,-125.053,-182.714,-142.212,-324.924,-182.714,-142.212,-324.924,-324.924,-116.385,-75.8842,-258.596,-258.596,-252.274,-152.7,-112.198,-294.912,-294.912,-228.583,-292.202 dDocent_Contig_3773 44 . A T 17142.1 . AB=0.356296;ABP=320.677;AC=3;AF=0.25;AN=12;AO=688;CIGAR=1X;DP=3182;DPB=3182;DPRA=0;EPP=1496.98;EPPR=5412.15;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=27246;QR=98829;RO=2491;RPL=0;RPP=1496.98;RPPR=5412.15;RPR=688;RUN=1;SAF=688;SAP=1496.98;SAR=0;SRF=2491;SRP=5412.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:414:368,46:368:14578:46:1813:-38.7408,0,-1186.31 0/0:543:514,28:514:20383:28:1072:0,-66.8091,-1736.03 0/0:394:375,19:375:14963:19:726:0,-52.9626,-1279.85 0/0:474:464,10:464:18379:10:406:0,-105.788,-1615.74 0/1:799:441,358:441:17513:358:14200:-1036.4,0,-1334.25 0/1:558:329,227:329:13013:227:9029:-644.296,0,-1002.45 dDocent_Contig_3774 74 . T C 2156.63 . AB=0.38009;ABP=30.6106;AC=1;AF=0.0833333;AN=12;AO=101;CIGAR=1X;DP=1072;DPB=1072;DPRA=0.958919;EPP=222.329;EPPR=2111.51;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.990099;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3806;QR=37257;RO=971;RPL=101;RPP=222.329;RPPR=2111.51;RPR=0;RUN=1;SAF=101;SAP=222.329;SAR=0;SRF=971;SRP=2111.51;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:167:155,12:155:5959:12:456:0,-8.88942,-494.833 0/0:419:416,3:416:15938:3:119:0,-115.036,-1422.43 0/0:185:185,0:185:7086:0:0:0,-55.6905,-637.568 0/1:221:137,84:137:5275:84:3151:-217.186,0,-408.19 0/0:18:17,1:17:656:1:40:0,-1.42286,-55.3763 0/0:62:61,1:61:2343:1:40:0,-14.6682,-207.074 dDocent_Contig_3776 24 . A C 48.8987 . AB=0.115385;ABP=69.8248;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=228;DPB=228;DPRA=1.47727;EPP=16.0391;EPPR=485.077;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.671171;PAO=0;PQA=0;PQR=0;PRO=0;QA=241;QR=8831;RO=222;RPL=0;RPP=16.0391;RPPR=485.077;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=222;SRP=485.077;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:59,0:59:2319:0:0:0,-17.7608,-208.87 0/1:52:46,6:46:1851:6:241:-6.41274,0,-151.144 0/0:24:24,0:24:940:0:0:0,-7.22472,-84.8976 0/0:40:40,0:40:1608:0:0:0,-12.0412,-144.954 0/0:22:22,0:22:866:0:0:0,-6.62266,-78.2482 0/0:31:31,0:31:1247:0:0:0,-9.33193,-112.496 dDocent_Contig_3777 13 . G A 100.198 . AB=0.0962963;ABP=385.222;AC=1;AF=0.0833333;AN=12;AO=57;CIGAR=1X2M1X;DP=1963;DPB=1963;DPRA=0;EPP=126.784;EPPR=4115.78;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.894737;PAIREDR=0.961457;PAO=0;PQA=0;PQR=0;PRO=0;QA=2247;QR=74066;RO=1894;RPL=0;RPP=126.784;RPPR=4115.78;RPR=57;RUN=1;SAF=57;SAP=126.784;SAR=0;SRF=1894;SRP=4115.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:354:349,4:349:13605:4:160:0,-91.8791,-1208.88 0|0:469:456,13:456:17854:13:510:0,-94.9385,-1559.44 0|0:404:392,2:392:15353:2:76:0,-111.774,-1373.57 0|0:272:263,9:263:10307:9:355:0,-49.5682,-894.799 0|1:270:244,26:244:9525:26:1028:-11.5427,0,-775.53 0|0:194:190,3:190:7422:3:118:0,-47.494,-656.719 dDocent_Contig_3778 52 . T C 121.928 . AB=0.113208;ABP=209.628;AC=3;AF=0.25;AN=12;AO=18;CIGAR=1X;DP=331;DPB=331;DPRA=0.924419;EPP=42.0968;EPPR=682.681;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=711;QR=12387;RO=313;RPL=18;RPP=42.0968;RPPR=682.681;RPR=0;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=313;SRP=682.681;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:22,4:22:888:4:161:-7.04812,0,-72.4006 0/1:31:26,5:26:1035:5:192:-8.31558,0,-84.1072 0/1:102:93,9:93:3677:9:358:-1.87364,0,-300.255 0/0:41:41,0:41:1580:0:0:0,-12.3422,-142.422 0/0:75:75,0:75:2980:0:0:0,-22.5772,-268.29 0/0:56:56,0:56:2227:0:0:0,-16.8577,-200.605 dDocent_Contig_3779 44 . C T 2697.38 . AB=0.158465;ABP=1032.4;AC=1;AF=0.0833333;AN=12;AO=254;CIGAR=1X;DP=5469;DPB=5469;DPRA=1.43391;EPP=520.368;EPPR=11078.7;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99904;PAO=0;PQA=0;PQR=0;PRO=0;QA=10118;QR=208152;RO=5208;RPL=4;RPP=520.368;RPPR=11078.7;RPR=250;RUN=1;SAF=254;SAP=554.564;SAR=0;SRF=5208;SRP=11312;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:827:827,0:827:33003:0:0:0,-248.952,-2967.2 0/0:941:933,8:933:37322:8:326:0,-253.559,-3325.72 0/0:584:584,0:584:23331:0:0:0,-175.802,-2097.73 0/0:836:833,0:833:33234:0:0:0,-250.758,-2987.59 0/0:1265:1177,85:1177:47056:85:3379:0,-76.1353,-3926.32 0/1:1016:854,161:854:34206:161:6413:-271.261,0,-2769.67 dDocent_Contig_3780 98 . N G 1633.98 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=56;CIGAR=1X;DP=56;DPB=56;DPRA=0;EPP=124.613;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1795;QR=0;RO=0;RPL=56;RPP=124.613;RPPR=0;RPR=0;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:95:-8.86398,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:50:0,50:0:0:50:1604:-144.638,-15.0515,0 1/1:2:0,2:0:0:2:61:-5.79407,-0.60206,0 dDocent_Contig_3781 36 . A G 437.242 . AB=0.105939;ABP=843.3;AC=1;AF=0.0833333;AN=12;AO=69;CIGAR=1X;DP=2061;DPB=2061;DPRA=3.69337;EPP=152.842;EPPR=4326.41;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2701;QR=78211;RO=1991;RPL=0;RPP=152.842;RPPR=4326.41;RPR=69;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=1991;SRP=4326.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:123:123,0:123:4748:0:0:0,-37.0267,-427.261 0/0:201:201,0:201:7961:0:0:0,-60.507,-716.09 0/0:196:196,0:196:7763:0:0:0,-59.0019,-698.285 0/0:204:203,0:203:7951:0:0:0,-61.1091,-714.811 0/0:714:711,3:711:27879:3:116:0,-204.118,-2495.99 0/1:623:557,66:557:21909:66:2585:-45.2471,0,-1782.52 dDocent_Contig_3782 81 . A G 74.9447 . AB=0.162162;ABP=39.6906;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=348;DPB=348;DPRA=0.687259;EPP=22.5536;EPPR=739.139;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.935103;PAO=0;PQA=0;PQR=0;PRO=0;QA=329;QR=12305;RO=339;RPL=9;RPP=22.5536;RPPR=739.139;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=339;SRP=739.139;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:69:69,0:69:2490:0:0:0,-20.7711,-224.342 0/0:83:83,0:83:2975:0:0:0,-24.9855,-267.969 0/0:64:64,0:64:2394:0:0:0,-19.2659,-215.673 0/0:43:43,0:43:1583:0:0:0,-12.9443,-142.733 0/1:37:31,6:31:1107:6:220:-9.01735,0,-88.7981 0/0:52:49,3:49:1756:3:109:0,-5.48556,-148.146 dDocent_Contig_3783 98 . N T 489.271 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=18;CIGAR=1X;DP=18;DPB=18;DPRA=0;EPP=42.0968;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=515;QR=0;RO=0;RPL=18;RPP=42.0968;RPPR=0;RPR=0;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:107:-9.89621,-1.20412,0 1/1:3:0,3:0:0:3:96:-8.95796,-0.90309,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:3:0,3:0:0:3:90:-8.3974,-0.90309,0 1/1:2:0,2:0:0:2:66:-6.26831,-0.60206,0 1/1:5:0,5:0:0:5:121:-11.1297,-1.50515,0 dDocent_Contig_3784 50 . A T 245.478 . AB=0.173913;ABP=87.981;AC=2;AF=0.166667;AN=12;AO=24;CIGAR=1X;DP=307;DPB=307;DPRA=1.97581;EPP=55.1256;EPPR=617.537;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.734982;PAO=0;PQA=0;PQR=0;PRO=0;QA=858;QR=10541;RO=283;RPL=9;RPP=6.26751;RPPR=3.20213;RPR=15;RUN=1;SAF=9;SAP=6.26751;SAR=15;SRF=139;SRP=3.20213;SRR=144;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:72:67,5:67:2476:5:161:0,-6.86645,-208.24 0/1:45:41,4:41:1530:4:158:-1.05231,0,-124.421 0/1:47:35,12:35:1308:12:443:-26.0626,0,-103.857 0/0:81:78,3:78:2885:3:96:0,-15.4262,-250.874 0/0:26:26,0:26:986:0:0:0,-7.82678,-89.0463 0/0:36:36,0:36:1356:0:0:0,-10.8371,-122.318 dDocent_Contig_3785 92 . C T 4599.18 . AB=0.192078;ABP=1520.83;AC=2;AF=0.166667;AN=12;AO=393;CIGAR=1X;DP=4575;DPB=4575;DPRA=0;EPP=856.399;EPPR=9060.22;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99976;PAO=0;PQA=0;PQR=0;PRO=0;QA=12493;QR=135081;RO=4171;RPL=393;RPP=856.399;RPPR=9060.22;RPR=0;RUN=1;SAF=393;SAP=856.399;SAR=0;SRF=4171;SRP=9060.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:720:713,5:713:23002:5:145:0,-202.965,-2056.58 0/0:809:805,2:805:25872:2:53:0,-238.065,-2323.15 0/0:506:488,18:488:15938:18:608:0,-97.2812,-1379.25 0/0:697:683,14:683:22234:14:401:0,-173.45,-1964.4 0/1:1007:831,171:831:26938:171:5453:-189.186,0,-2122.22 0/1:836:651,183:651:21097:183:5833:-273.954,0,-1647.28 dDocent_Contig_3786 67 . C A 168.649 . AB=0.111111;ABP=322.217;AC=3;AF=0.25;AN=12;AO=36;CIGAR=1X;DP=2711;DPB=2711;DPRA=0.0802654;EPP=81.1833;EPPR=5807.36;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1383;QR=102289;RO=2673;RPL=36;RPP=81.1833;RPPR=5807.36;RPR=0;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=2673;SRP=5807.36;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:132:123,9:123:4710:9:347:0,-8.14954,-392.295 0/1:99:88,11:88:3308:11:413:-7.71708,0,-268.07 0/1:43:36,7:36:1382:7:277:-12.3555,0,-111.7 0/1:101:91,9:91:3497:9:346:-1.3013,0,-284.65 0/0:1262:1261,0:1261:48324:0:0:0,-379.599,-4345.04 0/0:1074:1074,0:1074:41068:0:0:0,-323.306,-3692.91 dDocent_Contig_3787 1 . N G 222.219 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=29.1111;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=284;QR=0;RO=0;RPL=0;RPP=22.5536;RPPR=0;RPR=9;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:76:-4.19278,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:104:-8.39768,-0.90309,0 1/1:3:0,3:0:0:3:104:-9.15376,-0.90309,0 dDocent_Contig_3788 17 . T A 8106.92 . AB=0.239541;ABP=876.265;AC=3;AF=0.25;AN=12;AO=404;CIGAR=1X;DP=2595;DPB=2595;DPRA=0;EPP=880.285;EPPR=4760.71;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.999544;PAO=0;PQA=0;PQR=0;PRO=0;QA=15961;QR=87675;RO=2191;RPL=0;RPP=880.285;RPPR=4760.71;RPR=404;RUN=1;SAF=404;SAP=880.285;SAR=0;SRF=2191;SRP=4760.71;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:405:392,13:392:15627:13:513:0,-75.4029,-1358.66 0/1:516:462,54:462:18550:54:2137:-37.1827,0,-1512.57 0/0:352:326,26:326:13060:26:1022:0,-13.6876,-1082.13 0/0:356:346,10:346:13896:10:401:0,-70.7171,-1213.09 0/1:564:349,215:349:13916:215:8474:-592.434,0,-1081.6 0/1:402:316,86:316:12626:86:3414:-186.298,0,-1014.39 dDocent_Contig_3789 98 . N A 394.943 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=17;CIGAR=1X;DP=17;DPB=17;DPRA=0;EPP=39.9253;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=414;QR=0;RO=0;RPL=17;RPP=39.9253;RPPR=0;RPR=0;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:99:-9.23712,-0.90309,0 1/1:4:0,4:0:0:4:43:-3.97747,-1.20412,0 1/1:3:0,3:0:0:3:74:-6.90474,-0.90309,0 1/1:1:0,1:0:0:1:18:-1.79997,-0.30103,0 1/1:3:0,3:0:0:3:80:-7.46437,-0.90309,0 1/1:3:0,3:0:0:3:100:-9.33053,-0.90309,0 dDocent_Contig_3790 24 . T C 7560.83 . AB=0.141639;ABP=3011.42;AC=6;AF=0.5;AN=12;AO=382;CIGAR=4M1X1M;DP=2697;DPB=2721.5;DPRA=0;EPP=832.513;EPPR=3559.88;GTI=0;LEN=1;MEANALT=10.5;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=0.986911;PAIREDR=0.992674;PAO=0;PQA=0;PQR=0;PRO=0;QA=15300;QR=64079;RO=1638;RPL=0;RPP=832.513;RPPR=3559.88;RPR=382;RUN=1;SAF=382;SAP=832.513;SAR=0;SRF=1638;SRP=3559.88;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:429:276,27,9,30,27,45:276:10780:27,9,30,27,45:1060,366,1223,1087,1764:-61.9405,-57.8495,-935.878,-114.835,-913.816,-998.283,-44.1234,-843.106,-900.092,-921.251,-55.4377,-854.419,-911.406,-840.696,-933.468,0,-798.979,-855.966,-785.255,-796.569,-872.609 0|1:640:416,49,26,35,16,79:416:16307:49,26,35,16,79:1928,1024,1385,646,3157:-134.796,-101.426,-1427.61,-175.802,-1358.14,-1508.91,-146.058,-1328.39,-1402.77,-1476.46,-206.771,-1389.11,-1463.48,-1433.74,-1542.89,0,-1182.34,-1256.71,-1226.97,-1287.68,-1317.15 0|1:284:176,12,5,23,8,50:176:6921:12,5,23,8,50:450,204,918,323,1993:-111.134,-127.264,-692.922,-147.283,-679.703,-715.05,-88.5118,-620.932,-640.953,-650.861,-137.487,-669.907,-689.928,-631.157,-704.351,0,-532.423,-552.444,-493.673,-542.647,-554.224 0|1:496:303,23,7,38,23,88:303:11859:23,7,38,23,88:903,281,1537,879,3546:-201.058,-218.006,-1186.1,-269.116,-1169.87,-1242.03,-165.545,-1066.3,-1117.42,-1129.13,-220.168,-1120.92,-1172.04,-1068.47,-1188.27,0,-900.761,-951.871,-848.301,-902.921,-948.534 0|1:445:247,11,31,37,33,58:247:9669:11,31,37,33,58:410,1238,1461,1302,2338:-118.359,-159.159,-950.823,-90.7536,-852.175,-876.398,-72.5085,-833.93,-765.525,-856.346,-85.5895,-847.011,-778.606,-760.36,-870.631,0,-761.423,-693.018,-674.772,-687.853,-777.518 0|1:403:220,24,14,55,18,62:220:8543:24,14,55,18,62:938,556,2205,722,2502:-140.017,-129.132,-823.796,-160.475,-785.252,-858.15,-24.5863,-649.364,-680.708,-709.92,-146.756,-771.534,-802.877,-666.989,-843.227,0,-624.779,-656.123,-520.234,-642.404,-683.228 dDocent_Contig_3791 1 . N G 326.551 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=351;QR=0;RO=0;RPL=0;RPP=22.5536;RPPR=0;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:8:0,8:0:0:8:310:-28.2583,-2.40824,0 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_3792 44 . G A 867.501 . AB=0.0115607;ABP=361.504;AC=0;AF=0;AN=12;AO=10;CIGAR=1X1M1X2M1X;DP=559;DPB=559;DPRA=1.2378;EPP=24.725;EPPR=878.838;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.8625;PAO=0;PQA=0;PQR=0;PRO=0;QA=385;QR=18193;RO=480;RPL=0;RPP=24.725;RPPR=1045.32;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=460;SRP=878.838;SRR=20;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:93:88,2,2:88:3358:2,2:80,78:0,-19.8726,-294.796,-20.0576,-288.986,-294.975 0|0:173:132,2,34:132:5016:2,34:74,1298:-66.8187,-100.501,-511.243,0,-405.36,-401.179 0|0:71:57,0,13:57:2128:0,13:0,492:-23.1533,-40.312,-214.507,0,-174.175,-170.261 0|0:102:94,4,3:94:3541:4,3:152,118:0,-15.8378,-304.745,-18.5859,-296.242,-307.804 0|0:82:76,0,0:76:2895:0,0:0,0:0,-22.8783,-260.347,-22.8783,-260.347,-260.347 0|0:38:33,2,2:33:1255:2,2:79,77:0,-3.43236,-105.746,-3.61755,-100.025,-105.925 dDocent_Contig_3794 30 . A G 782.001 . AB=0.367089;ABP=15.1321;AC=1;AF=0.0833333;AN=12;AO=34;CIGAR=1X;DP=413;DPB=413;DPRA=1.10714;EPP=76.8404;EPPR=823.827;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.970899;PAO=0;PQA=0;PQR=0;PRO=0;QA=1326;QR=15177;RO=378;RPL=0;RPP=76.8404;RPPR=823.827;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=378;SRP=823.827;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:44,0:44:1756:0:0:0,-13.2453,-158.259 0/0:74:74,0:74:2983:0:0:0,-22.2762,-268.553 0/0:70:69,1:69:2801:1:18:0,-19.2721,-250.383 0/0:78:77,0:77:3068:0:0:0,-23.1793,-275.799 0/1:79:50,29:50:2015:29:1147:-79.7229,0,-157.756 0/0:68:64,4:64:2554:4:161:0,-5.59514,-215.122 dDocent_Contig_3795 11 . C A 40960.4 . AB=0.040747;ABP=2161.07;AC=0;AF=0;AN=12;AO=48;CIGAR=1X1M1X;DP=1603;DPB=1603;DPRA=1.38588;EPP=107.241;EPPR=632.737;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.958333;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1917;QR=11429;RO=290;RPL=0;RPP=107.241;RPPR=632.737;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=290;SRP=632.737;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:214:20,5,189:20:782:5,189:200,7603:-620.55,-610.095,-672.878,0,-47.8044,-7.38656 0|0:263:16,0,246:16:603:0,246:0,9766:-823.718,-828.534,-877.942,-24.6755,-74.0534,0 0|0:162:11,0,151:11:438:0,151:0,6071:-506.363,-509.674,-545.739,-8.99244,-45.4555,0 0|0:277:97,10,170:97:3839:10,170:404,6794:-530.368,-526.261,-839.196,0,-282.632,-264.764 0|0:424:81,12,331:81:3195:12,331:478,13211:-1063.59,-1048.61,-1307.86,0,-223.503,-163.222 0|0:263:65,21,177:65:2572:21,177:835,7025:-558.68,-509.5,-714.845,0,-142.918,-158.383 dDocent_Contig_3796 61 . T C 54704.1 . AB=0.421512;ABP=254.23;AC=6;AF=0.5;AN=12;AO=1979;CIGAR=1X;DP=4695;DPB=4695;DPRA=0;EPP=4300.35;EPPR=5889.87;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999631;PAO=0;PQA=0;PQR=0;PRO=0;QA=76657;QR=106903;RO=2711;RPL=1979;RPP=4300.35;RPPR=5889.87;RPR=0;RUN=1;SAF=1979;SAP=4300.35;SAR=0;SRF=2711;SRP=5889.87;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:633:383,249:383:15079:249:9538:-667.294,0,-1165.32 0/1:868:390,478:390:15268:478:18486:-1401.12,0,-1111.71 0/1:746:399,347:399:15694:347:13377:-978.539,0,-1186.72 0/1:686:353,332:353:14019:332:12826:-947.105,0,-1054.24 0/1:957:665,291:665:26193:291:11378:-735.456,0,-2067.3 0/1:805:521,282:521:20650:282:11052:-752.123,0,-1614.93 dDocent_Contig_3797 86 . G A 1048.46 . AB=0.256881;ABP=114.931;AC=5;AF=0.416667;AN=12;AO=59;CIGAR=1X;DP=251;DPB=251;DPRA=0;EPP=131.127;EPPR=419.933;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.440678;PAIREDR=0.552083;PAO=0;PQA=0;PQR=0;PRO=0;QA=2060;QR=6528;RO=192;RPL=59;RPP=131.127;RPPR=419.933;RPR=0;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=192;SRP=419.933;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:30,3:30:1024:3:101:0,-0.51026,-83.0457 0/1:34:25,9:25:848:9:309:-17.9086,0,-66.3971 0/1:32:26,6:26:864:6:216:-10.1576,0,-68.4334 0/1:65:39,26:39:1359:26:902:-61.9263,0,-103.045 0/1:45:34,11:34:1128:11:392:-22.0739,0,-88.2725 0/1:42:38,4:38:1305:4:140:-0.301534,0,-105.107 dDocent_Contig_3798 39 . C T 1047.35 . AB=0.111611;ABP=1458.68;AC=2;AF=0.166667;AN=12;AO=127;CIGAR=1X;DP=2777;DPB=2777;DPRA=1.45102;EPP=278.787;EPPR=5755.24;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997735;PAO=0;PQA=0;PQR=0;PRO=0;QA=5030;QR=104279;RO=2649;RPL=0;RPP=278.787;RPPR=5755.24;RPR=127;RUN=1;SAF=127;SAP=278.787;SAR=0;SRF=2649;SRP=5755.24;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:372:372,0:372:14638:0:0:0,-111.983,-1316.39 0/0:533:530,3:530:20791:3:117:0,-149.54,-1858.63 0/0:279:279,0:279:11012:0:0:0,-83.9874,-990.382 0/0:482:482,0:482:18955:0:0:0,-145.096,-1704.48 0/1:641:584,57:584:23072:57:2269:-11.4119,0,-1881.62 0/1:470:402,67:402:15811:67:2644:-96.5448,0,-1280.28 dDocent_Contig_3799 17 . G A 9056.48 . AB=0.0425273;ABP=2995.1;AC=0;AF=0;AN=12;AO=70;CIGAR=1X14M3I13M;DP=2448;DPB=2373.36;DPRA=0;EPP=155.013;EPPR=2554.49;GTI=0;LEN=1;MEANALT=22.75;MQM=60;MQMR=60;NS=6;NUMALT=9;ODDS=4.44089e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2538;QR=44965;RO=1175;RPL=0;RPP=155.013;RPPR=2554.49;RPR=70;RUN=1;SAF=70;SAP=155.013;SAR=0;SRF=1175;SRP=2554.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:353:86,8,42,34,0,5,17,13,0,21:86:3264:8,42,34,0,5,17,13,0,21:313,1669,1184,0,176,641,495,0,802:-111.526,-111.678,-376.912,0,-241.908,-255.002,-41.1653,-283.071,-171.396,-298.573,-137.415,-379.32,-267.645,-308.808,-405.057,-123.091,-364.996,-253.321,-294.484,-390.733,-389.228,-84.8921,-326.798,-215.123,-256.286,-352.535,-338.211,-347.418,-96.8136,-338.72,-227.045,-268.207,-364.457,-350.132,-311.934,-360.543,-137.415,-379.32,-267.645,-308.808,-405.057,-390.733,-352.535,-364.457,-405.057,-71.6136,-313.52,-201.845,-243.008,-339.257,-324.933,-286.735,-298.656,-339.257,-332.935 0|0:417:205,20,6,19,0,19,73,17,0,0:205:7827:20,6,19,0,19,73,17,0,0:753,238,710,0,715,2712,645,0,0:-160.172,-160.188,-796.322,-202.291,-782.751,-842.639,-163.751,-744.212,-786.314,-800.186,-221.883,-802.343,-844.445,-805.905,-864.036,-163.308,-743.768,-785.871,-747.331,-805.462,-799.743,0,-580.463,-622.565,-584.026,-642.157,-583.582,-620.181,-168.997,-749.457,-791.559,-753.02,-811.151,-752.577,-589.271,-806.033,-221.883,-802.343,-844.445,-805.905,-864.036,-805.462,-642.157,-811.151,-864.036,-221.883,-802.343,-844.445,-805.905,-864.036,-805.462,-642.157,-811.151,-864.036,-864.036 0|0:515:235,22,10,4,7,5,9,61,0,4:235:8987:22,10,4,7,5,9,61,0,4:844,403,159,242,192,335,2239,0,146:-112.248,-113.715,-844.504,-149.771,-817.908,-884.171,-169.899,-838.036,-874.091,-906.105,-163.331,-831.468,-867.523,-887.65,-898.634,-167.228,-835.365,-871.42,-891.548,-884.98,-903.133,-155.572,-823.709,-859.764,-879.891,-873.324,-877.221,-890.273,0,-668.14,-704.195,-724.322,-717.755,-721.652,-709.996,-719.05,-182.99,-851.127,-887.182,-907.309,-900.741,-904.639,-892.982,-737.413,-920.4,-171.063,-839.2,-875.255,-895.382,-888.814,-892.712,-881.056,-725.487,-908.473,-907.269 0|0:361:120,8,17,13,2,6,81,39,16,3:120:4619:8,17,13,2,6,81,39,16,3:305,676,485,74,236,3071,1401,569,113:-215.644,-226.748,-603.57,-196.111,-550.322,-570.225,-212.062,-566.273,-535.637,-587.38,-245.714,-599.924,-569.288,-585.239,-624.342,-232.354,-586.565,-555.929,-571.88,-605.531,-609.779,0,-354.214,-323.578,-339.529,-373.181,-359.821,-354.851,-137.51,-491.72,-461.084,-477.035,-510.687,-497.327,-264.977,-505,-205.407,-559.617,-528.981,-544.932,-578.584,-565.224,-332.874,-470.38,-579.821,-242.509,-596.72,-566.084,-582.035,-615.686,-602.327,-369.976,-507.482,-575.379,-620.837 0|0:441:352,0,0,0,0,0,17,0,0,51:352:13487:0,0,0,0,0,17,0,0,51:0,0,0,0,0,650,0,0,1782:-38.9684,-144.931,-1251.81,-144.931,-1251.81,-1251.81,-144.931,-1251.81,-1251.81,-1251.81,-144.931,-1251.81,-1251.81,-1251.81,-1251.81,-144.931,-1251.81,-1251.81,-1251.81,-1251.81,-1251.81,-91.5934,-1198.48,-1198.48,-1198.48,-1198.48,-1198.48,-1193.36,-144.931,-1251.81,-1251.81,-1251.81,-1251.81,-1251.81,-1198.48,-1251.81,-144.931,-1251.81,-1251.81,-1251.81,-1251.81,-1251.81,-1198.48,-1251.81,-1251.81,0,-1106.88,-1106.88,-1106.88,-1106.88,-1106.88,-1053.55,-1106.88,-1106.88,-1091.53 0|0:361:177,1,0,0,18,0,19,0,0,113:177:6781:1,0,0,18,0,19,0,0,113:41,0,0,620,0,704,0,0,4065:-278.311,-328.209,-884.416,-331.593,-884.717,-888.101,-331.593,-884.717,-888.101,-888.101,-281.244,-834.368,-837.752,-837.752,-832.333,-331.593,-884.717,-888.101,-888.101,-837.752,-888.101,-274.005,-827.129,-830.514,-830.514,-780.165,-830.514,-824.794,-331.593,-884.717,-888.101,-888.101,-837.752,-888.101,-830.514,-888.101,-331.593,-884.717,-888.101,-888.101,-837.752,-888.101,-830.514,-888.101,-888.101,0,-553.137,-556.521,-556.521,-506.173,-556.521,-498.934,-556.521,-556.521,-522.504 dDocent_Contig_3800 40 . G C 450.451 . AB=0.115663;ABP=535.471;AC=1;AF=0.0833333;AN=12;AO=70;CIGAR=1X;DP=3266;DPB=3266;DPRA=0.782751;EPP=155.013;EPPR=6936.52;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.999687;PAO=0;PQA=0;PQR=0;PRO=0;QA=2761;QR=126163;RO=3193;RPL=0;RPP=155.013;RPPR=6936.52;RPR=70;RUN=1;SAF=70;SAP=155.013;SAR=0;SRF=3193;SRP=6936.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:671:670,0:670:26472:0:0:0,-201.69,-2379.84 0/0:736:734,1:734:28958:1:30:0,-218.607,-2600.68 0/0:561:561,0:561:22226:0:0:0,-168.878,-1998.46 0/0:600:600,0:600:23714:0:0:0,-180.618,-2132.28 0/0:283:262,21:262:10352:21:827:0,-10.4517,-856.293 0/1:415:366,48:366:14441:48:1904:-46.568,0,-1173.64 dDocent_Contig_3801 24 . T A 3378.3 . AB=0.155573;ABP=1334.3;AC=2;AF=0.166667;AN=12;AO=412;CIGAR=1X;DP=4349;DPB=4349;DPRA=0;EPP=897.657;EPPR=8549.93;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997967;PAO=0;PQA=0;PQR=0;PRO=0;QA=16569;QR=158289;RO=3936;RPL=0;RPP=897.657;RPPR=8549.93;RPR=412;RUN=1;SAF=412;SAP=897.657;SAR=0;SRF=3936;SRP=8549.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:606:572,34:572:23036:34:1346:0,-61.0223,-1949.72 0/0:839:769,70:769:31033:70:2792:0,-1.18375,-2538.6 0/1:570:506,63:506:20352:63:2536:-56.6727,0,-1658.16 0/1:722:584,138:584:23498:138:5577:-284.379,0,-1895.31 0/0:911:838,73:838:33594:73:2950:0,-8.65747,-2754.67 0/0:701:667,34:667:26776:34:1368:0,-87.6473,-2283.97 dDocent_Contig_3802 98 . N T 1904.6 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=63;CIGAR=5X;DP=64;DPB=74;DPRA=0;EPP=139.813;EPPR=0;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=10;PQA=320;PQR=0;PRO=0;QA=2113;QR=0;RO=0;RPL=63;RPP=139.813;RPPR=0;RPR=0;RUN=1;SAF=63;SAP=139.813;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:17:0,17:0:0:17:571:-51.3873,-5.11751,0 1|1:47:0,46:0:0:46:1542:-138.772,-13.8474,0 .:.:.:.:.:.:.:. dDocent_Contig_3804 98 . N A 213.178 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=213;QR=0;RO=0;RPL=8;RPP=20.3821;RPPR=0;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:25:-2.49986,-0.30103,0 1/1:3:0,3:0:0:3:49:-4.57205,-0.90309,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 dDocent_Contig_3805 73 . A T 1132.35 . AB=0.157047;ABP=764.107;AC=3;AF=0.25;AN=12;AO=181;CIGAR=1X;DP=1569;DPB=1569;DPRA=0;EPP=396.047;EPPR=3014.84;GTI=0;LEN=1;MEANALT=1.16667;MQM=58.5856;MQMR=59.6748;NS=6;NUMALT=1;ODDS=0;PAIRED=0.569061;PAIREDR=0.658976;PAO=0;PQA=0;PQR=0;PRO=0;QA=5894;QR=46388;RO=1387;RPL=181;RPP=396.047;RPPR=3014.84;RPR=0;RUN=1;SAF=181;SAP=396.047;SAR=0;SRF=1387;SRP=3014.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:259:242,17:242:8149:17:540:0,-29.0766,-684.517 0/0:270:251,19:251:8388:19:644:0,-23.0044,-696.665 0/1:277:238,39:238:7948:39:1274:-31.5551,0,-632.006 0/0:295:267,28:267:8939:28:913:0,-6.34287,-721.696 0/1:264:219,44:219:7272:44:1397:-46.6951,0,-575.334 0/1:204:170,34:170:5692:34:1126:-40.2068,0,-448.296 dDocent_Contig_3806 135 . T A 309.113 . AB=0.116477;ABP=452.727;AC=1;AF=0.0833333;AN=12;AO=50;CIGAR=1X;DP=2627;DPB=2627;DPRA=0.878904;EPP=111.584;EPPR=5583.69;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994942;PAO=0;PQA=0;PQR=0;PRO=0;QA=1867;QR=95949;RO=2570;RPL=0;RPP=111.584;RPPR=5583.69;RPR=50;RUN=1;SAF=0;SAP=111.584;SAR=50;SRF=0;SRP=5583.69;SRR=2570;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:535:532,0:532:19810:0:0:0,-160.148,-1781.62 0/0:518:516,0:516:19330:0:0:0,-155.331,-1738.37 0/0:357:357,0:357:13456:0:0:0,-107.468,-1210.46 0/0:415:415,0:415:15353:0:0:0,-124.927,-1381.18 0/1:352:310,41:310:11582:41:1533:-32.4342,0,-936.175 0/0:450:440,9:440:16418:9:334:0,-104.866,-1446.5 dDocent_Contig_3807 10 . T G 216.86 . AB=0.164706;ABP=86.0116;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=321;DPB=321;DPRA=0.720339;EPP=33.4109;EPPR=669.652;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.928571;PAIREDR=0.957655;PAO=0;PQA=0;PQR=0;PRO=0;QA=553;QR=12225;RO=307;RPL=0;RPP=33.4109;RPPR=669.652;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=307;SRP=669.652;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:77:77,0:77:3066:0:0:0,-23.1793,-276.019 0/0:61:61,0:61:2406:0:0:0,-18.3628,-216.693 0/1:54:44,10:44:1771:10:402:-20.2839,0,-143.347 0/1:31:27,4:27:1091:4:151:-4.62376,0,-89.1423 0/0:37:37,0:37:1484:0:0:0,-11.1381,-133.804 0/0:61:61,0:61:2407:0:0:0,-18.3628,-216.787 dDocent_Contig_3808 7 . C T 12763.1 . AB=0.0851911;ABP=1880.17;AC=0;AF=0;AN=12;AO=107;CIGAR=1X2M1X1M;DP=1256;DPB=1256;DPRA=0;EPP=235.358;EPPR=943.258;GTI=0;LEN=1;MEANALT=3.66667;MQM=34.4766;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0.990762;PAO=0;PQA=0;PQR=0;PRO=0;QA=3676;QR=16620;RO=433;RPL=0;RPP=235.358;RPPR=943.258;RPR=107;RUN=1;SAF=107;SAP=235.358;SAR=0;SRF=433;SRP=943.258;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:168:64,11,31,57:64:2466:11,31,57:376,1220,2284:-168.91,-160.524,-359.698,-87.8266,-262.662,-280.985,0,-174.843,-102.144,-185.338 0|0:201:89,3,58,51:89:3419:3,58,51:101,2315,2022:-163.872,-183.212,-462.972,0,-273.212,-263.205,-24.2508,-297.461,-114.247,-289.561 0|0:119:46,3,30,40:46:1771:3,30,40:105,1183,1599:-117.863,-123.979,-268.482,-34.3862,-172.061,-170.762,0,-137.678,-48.0804,-133.368 0|0:157:62,6,52,37:62:2358:6,52,37:205,2105,1467:-154.91,-158.449,-350.025,0,-178.262,-177.735,-52.8388,-231.095,-72.6461,-235.084 0|0:362:90,61,69,137:90:3451:61,69,137:2084,2687,5426:-419.462,-293.729,-558.608,-225.744,-356.165,-488.221,0,-130.432,-62.4394,-242.015 0|0:249:82,23,87,57:82:3155:23,87,57:805,3486,2300:-262.512,-227.912,-480.014,0,-199.748,-232.845,-97.5985,-297.343,-69.4311,-339.472 dDocent_Contig_3809 98 . N A 157.204 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=56.8;MQMR=0;NS=1;NUMALT=1;ODDS=8.07091;PAIRED=0.2;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=171;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:171:-15.7203,-1.50515,0 dDocent_Contig_3810 23 . A G 419.866 . AB=0.114973;ABP=484.589;AC=1;AF=0.0833333;AN=12;AO=61;CIGAR=1X;DP=2304;DPB=2304;DPRA=0.827121;EPP=135.47;EPPR=4873.62;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2436;QR=89802;RO=2243;RPL=0;RPP=135.47;RPPR=4873.62;RPR=61;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=2243;SRP=4873.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:328:328,0:328:13120:0:0:0,-98.7378,-1179.81 0/1:374:331,43:331:13288:43:1732:-43.5094,0,-1082.32 0/0:313:310,3:310:12467:3:123:0,-82.7576,-1109.62 0/0:356:341,15:341:13603:15:581:0,-54.5479,-1170.63 0/0:493:493,0:493:19717:0:0:0,-148.408,-1772.88 0/0:440:440,0:440:17607:0:0:0,-132.453,-1583.17 dDocent_Contig_3811 1 . N G 75.9266 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=80;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:80:-7.59157,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_3813 57 . A T 264.922 . AB=0.149606;ABP=138.445;AC=2;AF=0.166667;AN=12;AO=26;CIGAR=2M1X2M;DP=384;DPB=386.8;DPRA=0.653333;EPP=59.4686;EPPR=760.854;GTI=0;LEN=1;MEANALT=1.8;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.461538;PAIREDR=0.636103;PAO=0;PQA=0;PQR=0;PRO=0;QA=1002;QR=12930;RO=349;RPL=20;RPP=19.3799;RPPR=4.06182;RPR=6;RUN=1;SAF=20;SAP=19.3799;SAR=6;SRF=168;SRP=4.06182;SRR=181;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:73:66,0,7:66:2456:0,7:0,272:-2.8705,-22.7385,-223.735,0,-201.384,-199.276 0|1:54:36,6,12:36:1269:6,12:219,459:-26.8338,-19.7849,-121.257,0,-85.3965,-99.6777 0|0:40:36,1,3:36:1334:1,3:40,118:0,-7.54033,-116.349,-1.13649,-106.942,-109.335 0|0:51:47,0,3:47:1781:0,3:0,112:0,-14.1484,-160.152,-5.00904,-150.986,-150.083 0|0:90:90,0,0:90:3328:0,0:0,0:0,-27.0927,-299.679,-27.0927,-299.679,-299.679 0|0:76:74,0,1:74:2762:0,1:0,41:0,-22.2762,-248.353,-18.8921,-244.969,-244.667 dDocent_Contig_3814 28 . T A 44110.9 . AB=0.533455;ABP=29.7439;AC=6;AF=0.5;AN=12;AO=1467;CIGAR=1X;DP=2750;DPB=2750;DPRA=0;EPP=3188.56;EPPR=2786.84;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.96319;PAIREDR=0.99922;PAO=0;PQA=0;PQR=0;PRO=0;QA=58376;QR=51252;RO=1282;RPL=0;RPP=3188.56;RPPR=2786.84;RPR=1467;RUN=1;SAF=1467;SAP=3188.56;SAR=0;SRF=1282;SRP=2786.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:365:135,229:135:5408:229:9097:-708.215,0,-376.576 0/1:538:145,393:145:5812:393:15611:-1241.85,0,-360.9 0/1:281:139,142:139:5589:142:5635:-422.382,0,-418.228 0/1:474:240,234:240:9590:234:9288:-692.688,0,-719.812 0/1:571:338,233:338:13458:233:9304:-664.905,0,-1038.32 0/1:521:285,236:285:11395:236:9441:-692.265,0,-867.922 dDocent_Contig_3815 28 . C T 3436.22 . AB=0.246644;ABP=335.304;AC=3;AF=0.25;AN=12;AO=171;CIGAR=1X;DP=1056;DPB=1056;DPRA=0;EPP=374.332;EPPR=1924.76;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.982456;PAIREDR=0.99209;PAO=0;PQA=0;PQR=0;PRO=0;QA=6812;QR=35086;RO=885;RPL=0;RPP=374.332;RPPR=1924.76;RPR=171;RUN=1;SAF=171;SAP=374.332;SAR=0;SRF=885;SRP=1924.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:153:142,11:142:5577:11:426:0,-7.37136,-463.081 0/0:196:189,7:189:7518:7:285:0,-32.9777,-650.219 0/0:111:105,6:105:4206:6:238:0,-11.6218,-356.707 0/1:158:138,20:138:5402:20:808:-25.4736,0,-438.471 0/1:250:176,74:176:6977:74:2966:-191.773,0,-552.347 0/1:188:135,53:135:5406:53:2089:-131.597,0,-429.776 dDocent_Contig_3816 20 . G C 42294.1 . AB=0.714589;ABP=756.956;AC=6;AF=0.5;AN=12;AO=1347;CIGAR=1X;DP=1885;DPB=1885;DPRA=0;EPP=2927.98;EPPR=1171.26;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=53457;QR=21359;RO=538;RPL=0;RPP=2927.98;RPPR=1171.26;RPR=1347;RUN=1;SAF=1347;SAP=2927.98;SAR=0;SRF=538;SRP=1171.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:250:95,155:95:3805:155:6166:-479.456,0,-267.194 0/1:385:85,300:85:3364:300:11904:-954.647,0,-186.908 0/1:185:32,153:32:1268:153:6071:-490.468,0,-58.6961 0/1:296:82,214:82:3251:214:8523:-677.498,0,-203.554 0/1:380:96,284:96:3808:284:11304:-902.217,0,-228.339 0/1:389:148,241:148:5863:241:9489:-736.352,0,-410.374 dDocent_Contig_3817 62 . A C 95.9222 . AB=0.133333;ABP=90.593;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=223;DPB=223;DPRA=1.35833;EPP=37.7539;EPPR=452.505;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.942029;PAO=0;PQA=0;PQR=0;PRO=0;QA=582;QR=8186;RO=207;RPL=16;RPP=37.7539;RPPR=452.505;RPR=0;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=207;SRP=452.505;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:42,2:42:1681:2:77:0,-5.93618,-144.204 0/0:44:40,4:40:1584:4:120:0,-2.15451,-131.703 0/1:34:30,4:30:1195:4:157:-4.27378,0,-97.5866 0/1:41:35,6:35:1366:6:228:-8.5399,0,-110.861 0/0:18:18,0:18:717:0:0:0,-5.41854,-64.8554 0/0:42:42,0:42:1643:0:0:0,-12.6433,-148.107 dDocent_Contig_3818 201 . C T 435.681 . AB=0.333333;ABP=16.763;AC=1;AF=0.0833333;AN=12;AO=23;CIGAR=1X;DP=339;DPB=339;DPRA=1.25962;EPP=52.9542;EPPR=689.196;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.913043;PAIREDR=0.974684;PAO=0;PQA=0;PQR=0;PRO=0;QA=832;QR=11379;RO=316;RPL=23;RPP=52.9542;RPPR=689.196;RPR=0;RUN=1;SAF=0;SAP=52.9542;SAR=23;SRF=0;SRP=689.196;SRR=316;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:53:53,0:53:1870:0:0:0,-15.9546,-168.566 0/0:68:68,0:68:2465:0:0:0,-20.47,-222.095 0/0:49:49,0:49:1777:0:0:0,-14.7505,-160.208 0/0:38:38,0:38:1369:0:0:0,-11.4391,-123.507 0/0:74:70,4:70:2516:4:144:0,-8.96277,-213.366 0/1:57:38,19:38:1382:19:688:-45.091,0,-107.516 dDocent_Contig_3819 45 . T C 160.651 . AB=0.117647;ABP=197.293;AC=2;AF=0.166667;AN=12;AO=32;CIGAR=1X;DP=647;DPB=647;DPRA=2.11071;EPP=30.1537;EPPR=1336.29;GTI=0;LEN=1;MEANALT=1.2;MQM=59.625;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.895765;PAO=0;PQA=0;PQR=0;PRO=0;QA=1281;QR=24635;RO=614;RPL=6;RPP=30.1537;RPPR=1336.29;RPR=26;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=614;SRP=1336.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:87:78,9:78:3124:9:362:-6.75408,0,-255.044 0/0:78:73,5:73:2943:5:201:0,-5.00982,-246.484 0/0:56:56,0:56:2237:0:0:0,-16.8577,-201.499 0/1:66:57,9:57:2275:9:356:-12.5329,0,-185.04 0/0:215:212,3:212:8531:3:119:0,-53.6261,-756.186 0/0:145:138,6:138:5525:6:243:0,-21.538,-474.847 dDocent_Contig_3820 11 . T A 391.069 . AB=0.233766;ABP=50.4161;AC=2;AF=0.166667;AN=12;AO=18;CIGAR=1X;DP=190;DPB=190;DPRA=1.36283;EPP=42.0968;EPPR=374.332;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.777778;PAIREDR=0.590643;PAO=0;PQA=0;PQR=0;PRO=0;QA=721;QR=6674;RO=171;RPL=0;RPP=42.0968;RPPR=374.332;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=171;SRP=374.332;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1181:0:0:0,-9.0309,-106.567 0/1:42:32,9:32:1253:9:366:-20.5538,0,-100.287 0/0:17:17,0:17:638:0:0:0,-5.11751,-57.7423 0/1:35:26,9:26:1009:9:355:-21.775,0,-80.5703 0/0:36:36,0:36:1417:0:0:0,-10.8371,-127.79 0/0:30:30,0:30:1176:0:0:0,-9.0309,-106.115 dDocent_Contig_3821 16 . C A 294.407 . AB=0.126263;ABP=243.232;AC=1;AF=0.0833333;AN=12;AO=53;CIGAR=1X;DP=1626;DPB=1626;DPRA=0.658047;EPP=118.098;EPPR=3416.56;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=59.8531;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996819;PAO=0;PQA=0;PQR=0;PRO=0;QA=2063;QR=62567;RO=1572;RPL=0;RPP=118.098;RPPR=3416.56;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=1572;SRP=3416.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:278:260,18:260:10372:18:672:0,-22.8938,-866.624 0/0:379:379,0:379:15075:0:0:0,-114.09,-1355.59 0/1:198:173,25:173:6865:25:1003:-30.9636,0,-557.946 0/0:217:216,1:216:8629:1:41:0,-61.2289,-767.77 0/0:329:324,5:324:12943:5:199:0,-80.7514,-1143.47 0/0:225:220,4:220:8683:4:148:0,-53.9529,-767.329 dDocent_Contig_3822 73 . C T 1505.35 . AB=0.117344;ABP=2224.91;AC=2;AF=0.166667;AN=12;AO=365;CIGAR=1X;DP=4782;DPB=4782;DPRA=0;EPP=795.598;EPPR=9590.06;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13400;QR=157589;RO=4415;RPL=365;RPP=795.598;RPPR=9590.06;RPR=0;RUN=1;SAF=365;SAP=795.598;SAR=0;SRF=4415;SRP=9590.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:743:700,43:700:24346:43:1512:0,-87.309,-2054.15 0/1:773:677,96:677:23886:96:3473:-80.0656,0,-1916.38 0/0:586:540,46:540:19393:46:1738:0,-19.7245,-1588.01 0/0:640:605,35:605:21771:35:1313:0,-74.2021,-1840.12 0/0:1066:1029,36:1029:36674:36:1291:0,-204.198,-3182.88 0/1:974:864,109:864:31519:109:4073:-73.6912,0,-2542.24 dDocent_Contig_3823 98 . N A 558.855 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=20;CIGAR=1X;DP=20;DPB=20;DPRA=0;EPP=46.4397;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0.95;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=611;QR=0;RO=0;RPL=20;RPP=46.4397;RPPR=0;RPR=0;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:9:0,9:0:0:9:278:-25.3209,-2.70927,0 1/1:11:0,11:0:0:11:333:-30.2636,-3.31133,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_3824 21 . T C 208.684 . AB=0.129252;ABP=178.515;AC=3;AF=0.25;AN=12;AO=25;CIGAR=1X;DP=289;DPB=289;DPRA=0;EPP=57.2971;EPPR=576.279;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.16;PAIREDR=0.568182;PAO=0;PQA=0;PQR=0;PRO=0;QA=1013;QR=10574;RO=264;RPL=0;RPP=57.2971;RPPR=576.279;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=264;SRP=576.279;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:30,4:30:1204:4:164:-4.91488,0,-98.3949 0/1:61:53,8:53:2121:8:321:-10.8949,0,-172.702 0/1:52:45,7:45:1771:7:284:-10.2804,0,-143.945 0/0:55:54,1:54:2177:1:40:0,-12.561,-192.101 0/0:36:34,2:34:1373:2:82:0,-3.0574,-116.044 0/0:51:48,3:48:1928:3:122:0,-3.98004,-162.345 dDocent_Contig_3826 12 . G A 215.078 . AB=0.12;ABP=253.859;AC=2;AF=0.166667;AN=12;AO=32;CIGAR=1X;DP=800;DPB=800;DPRA=0;EPP=72.4974;EPPR=1670.7;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1231;QR=29927;RO=768;RPL=0;RPP=72.4974;RPPR=1670.7;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=768;SRP=1670.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:73:63,10:63:2406:10:386:-13.12,0,-194.727 0/1:127:113,14:113:4439:14:550:-11.6097,0,-361.247 0/0:118:114,4:114:4521:4:162:0,-20.5546,-391.865 0/0:110:108,2:108:4250:2:82:0,-25.3336,-374.706 0/0:225:224,1:224:8669:1:41:0,-63.6372,-775.706 0/0:147:146,1:146:5642:1:10:0,-43.2514,-506.64 dDocent_Contig_3827 22 . G A 158.912 . AB=0.148148;ABP=90.1105;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=243;DPB=243;DPRA=0.944;EPP=31.2394;EPPR=502.449;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.986957;PAO=0;PQA=0;PQR=0;PRO=0;QA=516;QR=9025;RO=230;RPL=0;RPP=31.2394;RPPR=502.449;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=230;SRP=502.449;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:39,0:39:1502:0:0:0,-11.7402,-135.427 0/0:46:46,0:46:1799:0:0:0,-13.8474,-162.132 0/1:38:31,7:31:1236:7:277:-13.8603,0,-100.072 0/1:43:38,5:38:1509:5:198:-5.25271,0,-123.111 0/0:40:40,0:40:1567:0:0:0,-12.0412,-141.279 0/0:37:36,1:36:1412:1:41:0,-7.04354,-123.232 dDocent_Contig_3828 43 . G A 60.0744 . AB=0.192308;ABP=24.391;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=799;DPB=799;DPRA=0.276358;EPP=24.725;EPPR=1716.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.9;PAIREDR=0.264892;PAO=0;PQA=0;PQR=0;PRO=0;QA=342;QR=27797;RO=789;RPL=0;RPP=24.725;RPPR=1716.3;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=789;SRP=1716.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:68:66,2:66:2268:2:68:0,-14.0126,-197.933 0/0:79:76,3:76:2599:3:107:0,-13.7996,-224.188 0/0:48:48,0:48:1703:0:0:0,-14.4494,-153.551 0/1:26:21,5:21:724:5:167:-7.53032,0,-57.6451 0/0:283:283,0:283:9965:0:0:0,-85.1915,-896.766 0/0:295:295,0:295:10538:0:0:0,-88.8038,-948.3 dDocent_Contig_3830 33 . A C 4044.09 . AB=0.160774;ABP=1501.3;AC=3;AF=0.25;AN=12;AO=309;CIGAR=1X;DP=2982;DPB=2982;DPRA=0.821233;EPP=673.995;EPPR=5805.18;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998503;PAO=0;PQA=0;PQR=0;PRO=0;QA=12244;QR=106012;RO=2672;RPL=0;RPP=673.995;RPPR=5805.18;RPR=309;RUN=1;SAF=309;SAP=673.995;SAR=0;SRF=2672;SRP=5805.18;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:482:383,99:383:15208:99:3906:-206.442,0,-1222.48 0/1:537:452,85:452:17949:85:3386:-143.125,0,-1452.35 0/0:355:328,27:328:13030:27:1045:0,-12.5383,-1077.43 0/1:480:422,57:422:16737:57:2271:-60.0645,0,-1360.55 0/0:584:584,0:584:23133:0:0:0,-175.802,-2080.05 0/0:544:503,41:503:19955:41:1636:0,-16.2867,-1646.87 dDocent_Contig_3831 1 . N G 74.0456 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=78;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:78:-7.40347,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_3832 98 . N T 6142.68 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=202;CIGAR=1X;DP=206;DPB=206;DPRA=0;EPP=441.648;EPPR=0;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.79703;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6811;QR=0;RO=0;RPL=202;RPP=441.648;RPPR=0;RPR=0;RUN=1;SAF=202;SAP=441.648;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:29:0,29:0:0:29:976:-88.1447,-8.72987,0 1/1:55:0,55:0:0:55:1875:-169.032,-16.5567,0 1/1:34:0,33:0:0:33:1103:-99.2319,-9.93399,0 1/1:37:0,36:0:0:36:1196:-107.586,-10.8371,0 1/1:28:0,27:0:0:27:915:-82.3112,-8.12781,0 1/1:23:0,22:0:0:22:746:-67.1166,-6.62266,0 dDocent_Contig_3833 50 . G T 305.27 . AB=0.182796;ABP=84.2887;AC=2;AF=0.166667;AN=12;AO=25;CIGAR=1X;DP=278;DPB=278;DPRA=0.726667;EPP=57.2971;EPPR=552.393;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.96;PAIREDR=0.889328;PAO=0;PQA=0;PQR=0;PRO=0;QA=1002;QR=10079;RO=253;RPL=25;RPP=57.2971;RPPR=552.393;RPR=0;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=253;SRP=552.393;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:36,2:36:1446:2:80:0,-3.84735,-122.798 0/0:60:60,0:60:2344:0:0:0,-18.0618,-211.097 0/0:26:24,2:24:978:2:81:0,-0.141046,-80.6297 0/0:61:57,4:57:2259:4:163:0,-3.3044,-188.419 0/1:35:26,9:26:1045:9:353:-21.5884,0,-83.8057 0/1:58:50,8:50:2007:8:325:-12.1599,0,-163.358 dDocent_Contig_3834 98 . N C 860.613 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=32;CIGAR=1X;DP=32;DPB=32;DPRA=0;EPP=72.4974;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=936;QR=0;RO=0;RPL=32;RPP=72.4974;RPPR=0;RPR=0;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:8:0,8:0:0:8:218:-19.888,-2.40824,0 1/1:9:0,9:0:0:9:276:-25.141,-2.70927,0 1/1:11:0,11:0:0:11:341:-30.9926,-3.31133,0 1/1:4:0,4:0:0:4:101:-9.34069,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_3835 98 . N A 129.054 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=133;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:104:-9.70309,-0.90309,0 dDocent_Contig_3836 8 . A T 46.0129 . AB=0.101796;ABP=233.017;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=761;DPB=761;DPRA=1.40572;EPP=39.9253;EPPR=1616.41;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=623;QR=28368;RO=743;RPL=0;RPP=39.9253;RPPR=1616.41;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=743;SRP=1616.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:120:120,0:120:4536:0:0:0,-36.1236,-408.301 0/0:74:74,0:74:2849:0:0:0,-22.2762,-256.587 0/0:113:113,0:113:4326:0:0:0,-34.0164,-389.409 0/0:81:81,0:81:3122:0:0:0,-24.3834,-281.131 0/0:206:205,0:205:7804:0:0:0,-61.7111,-701.858 0/1:167:150,17:150:5731:17:623:-6.12416,0,-465.489 dDocent_Contig_3837 21 . G A 839.326 . AB=0.184739;ABP=217.969;AC=4;AF=0.333333;AN=12;AO=52;CIGAR=1X;DP=335;DPB=335;DPRA=0;EPP=115.927;EPPR=617.537;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.480769;PAIREDR=0.512367;PAO=0;PQA=0;PQR=0;PRO=0;QA=2071;QR=11043;RO=283;RPL=0;RPP=115.927;RPPR=617.537;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=283;SRP=617.537;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:49:45,4:45:1792:4:159:0,-0.0585147,-146.806 0/1:90:73,17:73:2823:17:674:-33.8966,0,-227.104 0/1:46:34,12:34:1341:12:473:-29.0721,0,-107.105 0/1:53:42,11:42:1626:11:442:-24.1803,0,-130.622 0/0:37:35,2:35:1397:2:82:0,-3.35843,-118.203 0/1:60:54,6:54:2064:6:241:-4.004,0,-167.889 dDocent_Contig_3838 98 . N C 121.912 . AB=0;ABP=0;AC=4;AF=0.666667;AN=6;AO=4;CIGAR=1X;DP=5;DPB=5;DPRA=2;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=122;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:58:-5.50918,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:64:-6.07837,-0.60206,0 0/0:1:0,0:0:0:0:0:0,0,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_3839 9 . T C 1419.83 . AB=0.257028;ABP=130.691;AC=5;AF=0.416667;AN=12;AO=67;CIGAR=1X2M1X;DP=302;DPB=302;DPRA=0;EPP=148.499;EPPR=502.449;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.626866;PAIREDR=0.973913;PAO=0;PQA=0;PQR=0;PRO=0;QA=2609;QR=8978;RO=230;RPL=0;RPP=148.499;RPPR=502.449;RPR=67;RUN=1;SAF=67;SAP=148.499;SAR=0;SRF=230;SRP=502.449;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:52:39,13:39:1540:13:501:-29.7803,0,-123.202 0|1:52:35,16:35:1371:16:607:-39.2024,0,-107.897 0|1:23:12,9:12:478:9:356:-25.7147,0,-36.686 0|0:53:50,3:50:1951:3:119:0,-4.85919,-164.717 0|1:54:36,18:36:1387:18:708:-47.7953,0,-108.849 0|1:68:58,8:58:2251:8:318:-8.71261,0,-182.513 dDocent_Contig_3840 98 . N T 187.362 . AB=0;ABP=0;AC=8;AF=0.8;AN=10;AO=9;CIGAR=1X;DP=10;DPB=10;DPRA=2.25;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=191;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 0/0:1:0,0:0:0:0:0:0,0,0 1/1:1:0,1:0:0:1:26:-2.59983,-0.30103,0 1/1:2:0,2:0:0:2:36:-3.41983,-0.60206,0 1/1:5:0,5:0:0:5:122:-11.2224,-1.50515,0 dDocent_Contig_3841 12 . C T 573.765 . AB=0.153527;ABP=254.297;AC=3;AF=0.25;AN=12;AO=44;CIGAR=1X;DP=445;DPB=445;DPRA=0.926582;EPP=98.5551;EPPR=873.771;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1760;QR=15867;RO=401;RPL=0;RPP=98.5551;RPPR=873.771;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=401;SRP=873.771;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:79:79,0:79:3121:0:0:0,-23.7814,-280.983 0/0:71:67,4:67:2656:4:163:0,-6.3147,-224.116 0/0:54:51,3:51:2024:3:107:0,-6.27581,-172.378 0/1:80:72,8:72:2862:8:319:-4.99355,0,-233.601 0/1:82:69,13:69:2757:13:530:-23.3622,0,-223.56 0/1:79:63,16:63:2447:16:641:-34.2426,0,-196.61 dDocent_Contig_3842 83 . C A 9673.23 . AB=0.261136;ABP=893.077;AC=6;AF=0.5;AN=12;AO=469;CIGAR=1X;DP=1796;DPB=1796;DPRA=0;EPP=1021.43;EPPR=2880.21;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0.985075;PAIREDR=0.988679;PAO=0;PQA=0;PQR=0;PRO=0;QA=16861;QR=47425;RO=1325;RPL=469;RPP=1021.43;RPPR=2880.21;RPR=0;RUN=1;SAF=469;SAP=1021.43;SAR=0;SRF=1325;SRP=2880.21;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:240:184,55:184:6493:55:1932:-102.132,0,-512.444 0/1:410:298,112:298:10501:112:3960:-233.175,0,-821.605 0/1:169:130,39:130:4716:39:1432:-78.2996,0,-373.696 0/1:278:198,80:198:7065:80:2901:-177.625,0,-552.189 0/1:327:249,78:249:8967:78:2817:-155.32,0,-708.517 0/1:372:266,105:266:9683:105:3819:-231.994,0,-759.467 dDocent_Contig_3843 43 . T A 660.401 . AB=0.0549451;ABP=159.571;AC=0;AF=0;AN=12;AO=5;CIGAR=1M1D1M1X6M1X5M;DP=420;DPB=419.812;DPRA=1.18182;EPP=13.8677;EPPR=702.224;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.885093;PAO=0;PQA=0;PQR=0;PRO=0;QA=187;QR=12661;RO=322;RPL=5;RPP=13.8677;RPPR=702.224;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=322;SRP=702.224;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:55:33,0,8,12,1:33:1280:0,8,12,1:0,307,458,39:-27.6376,-37.5716,-142.732,-12.3701,-117.534,-115.126,0,-105.167,-79.9697,-101.555,-34.3651,-139.526,-114.328,-101.961,-139.225 0|0:91:67,5,9,8,0:67:2645:5,9,8,0:187,363,318,0:-9.76547,-14.6245,-230.764,0,-202.345,-214.947,-3.74643,-206.087,-191.475,-218.99,-29.9345,-232.269,-217.656,-221.399,-247.58 0|0:77:64,0,2,5,5:64:2514:0,2,5,5:0,78,202,200:0,-19.2659,-226.047,-12.8522,-219.636,-219.034,-2.59525,-209.393,-202.982,-207.888,-2.77572,-209.572,-203.16,-192.918,-208.066 0|0:66:43,0,11,8,0:43:1691:0,11,8,0:0,427,318,0:-22.1376,-35.0819,-174.179,0,-139.098,-135.787,-8.89631,-147.998,-112.917,-145.589,-35.0819,-174.179,-139.098,-147.998,-174.179 0|0:66:58,0,8,0,0:58:2279:0,8,0,0:0,301,0,0:-7.57468,-25.0344,-212.496,0,-187.84,-185.432,-25.0344,-212.496,-187.84,-212.496,-25.0344,-212.496,-187.84,-212.496,-212.496 0|0:65:57,0,8,0,0:57:2252:0,8,0,0:0,304,0,0:-8.14664,-25.3053,-210.634,0,-185.71,-183.302,-25.3053,-210.634,-185.71,-210.634,-25.3053,-210.634,-185.71,-210.634,-210.634 dDocent_Contig_3844 84 . A G 98.1005 . AB=0.151515;ABP=72.629;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=297;DPB=297;DPRA=1.28177;EPP=35.5824;EPPR=615.366;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.4;PAIREDR=0.744681;PAO=0;PQA=0;PQR=0;PRO=0;QA=481;QR=9693;RO=282;RPL=8;RPP=3.15506;RPPR=3.1335;RPR=7;RUN=1;SAF=8;SAP=3.15506;SAR=7;SRF=143;SRP=3.1335;SRR=139;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:44,0:44:1519:0:0:0,-13.2453,-136.997 0/1:66:56,10:56:1918:10:343:-11.3329,0,-153.023 0/0:50:45,5:45:1548:5:138:0,-2.35997,-126.914 0/0:44:44,0:44:1510:0:0:0,-13.2453,-136.184 0/0:47:47,0:47:1610:0:0:0,-14.1484,-145.188 0/0:46:46,0:46:1588:0:0:0,-13.8474,-143.211 dDocent_Contig_3845 128 . T C 376.857 . AB=0.238938;ABP=69.9032;AC=5;AF=0.416667;AN=12;AO=27;CIGAR=1X;DP=127;DPB=127;DPRA=1.61429;EPP=61.6401;EPPR=220.158;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.703704;PAIREDR=0.86;PAO=0;PQA=0;PQR=0;PRO=0;QA=881;QR=3371;RO=100;RPL=0;RPP=61.6401;RPPR=220.158;RPR=27;RUN=1;SAF=0;SAP=61.6401;SAR=27;SRF=0;SRP=220.158;SRR=100;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:12,4:12:396:4:138:-7.94392,0,-31.1416 0/1:14:10,4:10:342:4:138:-8.54598,0,-26.8968 0/1:21:15,6:15:510:6:208:-12.738,0,-39.9029 0/1:24:19,5:19:667:5:170:-8.40984,0,-53.1309 0/0:14:14,0:14:474:0:0:0,-4.21442,-42.9844 0/1:38:30,8:30:982:8:227:-9.2699,0,-77.2397 dDocent_Contig_3846 14 . G A 34.6719 . AB=0.0970874;ABP=148.246;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=830;DPB=830;DPRA=0.897033;EPP=26.8965;EPPR=1781.45;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=434;QR=32405;RO=819;RPL=0;RPP=26.8965;RPPR=1781.45;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=819;SRP=1781.45;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:154:153,1:153:6055:1:38:0,-42.5613,-540.946 0/0:186:186,0:186:7390:0:0:0,-55.9916,-664.741 0/0:118:118,0:118:4680:0:0:0,-35.5215,-421.129 0/0:208:208,0:208:8199:0:0:0,-62.6142,-737.496 0/1:103:93,10:93:3680:10:396:-4.98992,0,-300.213 0/0:61:61,0:61:2401:0:0:0,-18.3628,-216.248 dDocent_Contig_3847 35 . C T 224.768 . AB=0.119522;ABP=318.618;AC=1;AF=0.0833333;AN=12;AO=83;CIGAR=1X;DP=1509;DPB=1509;DPRA=0;EPP=183.243;EPPR=2892.41;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=59.3874;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.930526;PAO=0;PQA=0;PQR=0;PRO=0;QA=3116;QR=56483;RO=1425;RPL=0;RPP=183.243;RPPR=3097.36;RPR=83;RUN=1;SAF=83;SAP=183.243;SAR=0;SRF=1401;SRP=2892.41;SRR=24;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:276:271,4:271:10708:4:129:0,-70.9932,-951.086 0/0:288:265,23:265:10495:23:876:0,-7.53891,-860.53 0/1:251:221,30:221:8734:30:1103:-23.9997,0,-699.948 0/0:222:209,13:209:8321:13:508:0,-20.7602,-695.385 0/0:264:260,4:260:10344:4:147:0,-65.8845,-916.691 0/0:208:199,9:199:7881:9:353:0,-30.4828,-676.36 dDocent_Contig_3848 25 . C A 33.1946 . AB=0.136364;ABP=28.2783;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=138;DPB=138;DPRA=0.948276;EPP=9.52472;EPPR=296.159;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.8;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=5303;RO=135;RPL=0;RPP=9.52472;RPPR=296.159;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=135;SRP=296.159;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:678:0:0:0,-5.11751,-61.35 0/0:21:21,0:21:844:0:0:0,-6.32163,-76.2741 0/0:31:31,0:31:1218:0:0:0,-9.33193,-109.895 0/0:21:21,0:21:806:0:0:0,-6.32163,-72.8523 0/0:26:26,0:26:1039:0:0:0,-7.82678,-93.8029 0/1:22:19,3:19:718:3:123:-4.84213,0,-58.3043 dDocent_Contig_3849 26 . A T 885.71 . AB=0.0497238;ABP=321.761;AC=2;AF=0.166667;AN=12;AO=31;CIGAR=1X3M;DP=1046;DPB=1046;DPRA=0.671667;EPP=70.3259;EPPR=2072.42;GTI=0;LEN=1;MEANALT=1.8;MQM=57.6774;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.870968;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1221;QR=37646;RO=953;RPL=0;RPP=70.3259;RPPR=2072.42;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=953;SRP=2072.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:158:154,0,3:154:6084:0,3:0,123:0,-46.3586,-547.05,-35.9743,-536.897,-535.994 0|0:215:206,3,6:206:8123:3,6:119,225:0,-54.2644,-721.672,-43.5513,-704.15,-710.109 0|0:252:239,0,13:239:9471:0,13:0,527:0,-71.9462,-851.473,-28.2711,-808.201,-804.288 0|0:240:231,9,0:231:9116:9,0:357,0:0,-50.2993,-798.03,-69.5379,-800.739,-819.705 0|1:59:49,9,1:49:1941:9,1:347,41:-8.89403,0,-157.053,-20.4782,-156.602,-179.988 0|1:122:74,40,8:74:2911:40,8:1558,305:-82.8988,0,-227.411,-80.5982,-214.885,-317.669 dDocent_Contig_3850 107 . N G 89.3873 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=91;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:32:-3.13615,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:59:-5.49977,-0.60206,0 dDocent_Contig_3851 19 . G T 276.432 . AB=0.105793;ABP=538.872;AC=2;AF=0.166667;AN=12;AO=80;CIGAR=1X;DP=1325;DPB=1325;DPRA=1.05592;EPP=176.728;EPPR=2706.49;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3195;QR=49312;RO=1245;RPL=0;RPP=176.728;RPPR=2706.49;RPR=80;RUN=1;SAF=80;SAP=176.728;SAR=0;SRF=1245;SRP=2706.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:211:211,0:211:8349:0:0:0,-63.5173,-750.958 0/0:272:252,20:252:9953:20:807:0,-8.93319,-822.227 0/1:112:99,13:99:3926:13:501:-11.7087,0,-319.619 0/1:285:256,29:256:10167:29:1163:-19.1564,0,-828.609 0/0:246:232,14:232:9124:14:561:0,-23.2235,-769.814 0/0:199:195,4:195:7793:4:163:0,-44.8465,-685.908 dDocent_Contig_3852 1 . N G 113.816 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=115;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_3853 26 . A T 85627.7 . AB=0.111663;ABP=5011.99;AC=0;AF=0;AN=12;AO=427;CIGAR=1X1M1X4M;DP=3824;DPB=3824;DPRA=0;EPP=930.229;EPPR=630.566;GTI=0;LEN=1;MEANALT=8;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=16490;QR=11258;RO=289;RPL=0;RPP=930.229;RPPR=630.566;RPR=427;RUN=1;SAF=427;SAP=930.229;SAR=0;SRF=289;SRP=630.566;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:507:72,59,231,5,119:72:2759:59,231,5,119:2269,8923,199,4702:-871.617,-707.015,-915.656,-160.499,-200.625,-317.362,-876.905,-917.031,-370.514,-1101.8,-506.393,-546.519,0,-716.409,-696.973 0|0:696:44,103,207,35,300:44:1728:103,207,35,300:3962,7993,1340,11834:-1474.58,-1162.58,-1273.69,-831.427,-648.301,-911.237,-1377.87,-1194.74,-863.595,-1509.46,-514.279,-331.151,0,-546.446,-566.093 0|0:334:13,19,121,22,158:13:504:19,121,22,158:743,4717,841,6217:-853.726,-796.551,-832.235,-469.934,-450.249,-474.913,-788.638,-768.953,-442.337,-823.419,-346.305,-326.62,0,-318.708,-340.145 0|0:636:91,65,201,9,249:91:3587:65,201,9,249:2483,7763,336,9908:-1130.79,-954.47,-1230.01,-520.654,-612.055,-755.258,-1130.67,-1222.07,-788.257,-1423.07,-342.416,-433.818,0,-610.02,-562.572 0|0:809:31,83,126,1,562:31:1200:83,126,1,562:3231,4867,41,22147:-2113.65,-1857.45,-1931.02,-1723.28,-1556.31,-1783.91,-2119.6,-1952.63,-1818.46,-2217.86,-301.142,-134.17,0,-396.321,-230.526 0|0:842:38,98,167,0,533:38:1480:98,167,0,533:3802,6405,0,21107:-2129.63,-1828.71,-1920.84,-1615.41,-1424.68,-1686.77,-2141.07,-1950.34,-1737.04,-2262.71,-404.029,-213.299,0,-525.664,-365.215 dDocent_Contig_3855 98 . N A 713.63 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=25;CIGAR=1X;DP=25;DPB=25;DPRA=0;EPP=57.2971;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=769;QR=0;RO=0;RPL=25;RPP=57.2971;RPPR=0;RPR=0;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:6:0,6:0:0:6:205:-18.7854,-1.80618,0 1/1:2:0,2:0:0:2:41:-3.89396,-0.60206,0 1/1:5:0,5:0:0:5:139:-12.7844,-1.50515,0 1/1:3:0,3:0:0:3:100:-9.33066,-0.90309,0 1/1:9:0,9:0:0:9:284:-25.8692,-2.70927,0 dDocent_Contig_3856 209 . N G 229.923 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=237;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:155:-14.3245,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 dDocent_Contig_3857 78 . G T 845.167 . AB=0.248756;ABP=113.215;AC=2;AF=0.166667;AN=12;AO=50;CIGAR=1X;DP=347;DPB=347;DPRA=2.75342;EPP=111.584;EPPR=645.766;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996622;PAO=0;PQA=0;PQR=0;PRO=0;QA=1638;QR=9965;RO=296;RPL=50;RPP=111.584;RPPR=645.766;RPR=0;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=296;SRP=645.766;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:44,0:44:1509:0:0:0,-13.2453,-136.104 0/0:26:26,0:26:875:0:0:0,-7.82678,-79.0603 0/0:32:32,0:32:1079:0:0:0,-9.63296,-97.4131 0/0:44:44,0:44:1482:0:0:0,-13.2453,-133.669 0/1:67:42,24:42:1401:24:768:-49.4723,0,-106.436 0/1:134:108,26:108:3619:26:870:-38.2663,0,-285.595 dDocent_Contig_3858 15 . T C 604.014 . AB=0.132275;ABP=446.979;AC=4;AF=0.333333;AN=12;AO=53;CIGAR=1X;DP=561;DPB=561;DPRA=0.88932;EPP=118.098;EPPR=1097.45;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.981132;PAIREDR=0.972441;PAO=0;PQA=0;PQR=0;PRO=0;QA=2108;QR=20208;RO=508;RPL=0;RPP=118.098;RPPR=1106.12;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=507;SRP=1097.45;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:103:103,0:103:4107:0:0:0,-31.0061,-369.593 0/1:105:96,9:96:3830:9:359:-1.06406,0,-313.094 0/1:91:83,8:83:3298:8:318:-1.58946,0,-269.484 0/0:80:77,3:77:3035:3:123:0,-12.6176,-261.779 0/1:59:48,11:48:1895:11:436:-21.8316,0,-152.996 0/1:123:101,22:101:4043:22:872:-41.7566,0,-326.821 dDocent_Contig_3859 21 . A T 3289.7 . AB=0.448819;ABP=8.78949;AC=2;AF=0.166667;AN=12;AO=134;CIGAR=1X;DP=1198;DPB=1198;DPRA=0;EPP=293.988;EPPR=2311.29;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5305;QR=42275;RO=1063;RPL=0;RPP=293.988;RPPR=2311.29;RPR=134;RUN=1;SAF=134;SAP=293.988;SAR=0;SRF=1063;SRP=2311.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:191:189,2:189:7451:2:81:0,-49.811,-662.55 0/0:277:263,13:263:10458:13:485:0,-39.226,-896.594 0/0:283:280,3:280:11155:3:120:0,-74.0042,-992.009 0/0:193:191,2:191:7594:2:82:0,-50.3191,-675.293 0/1:136:76,60:76:3055:60:2410:-176.107,0,-234.081 0/1:118:64,54:64:2562:54:2127:-156.084,0,-195.189 dDocent_Contig_3860 98 . N T 1112.08 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=36;CIGAR=1X;DP=36;DPB=36;DPRA=0;EPP=81.1833;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1206;QR=0;RO=0;RPL=36;RPP=81.1833;RPPR=0;RPR=0;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:13:0,13:0:0:13:455:-41.2838,-3.91339,0 1/1:6:0,6:0:0:6:182:-16.6778,-1.80618,0 1/1:1:0,1:0:0:1:25:-2.49986,-0.30103,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:8:0,8:0:0:8:277:-25.267,-2.40824,0 1/1:6:0,6:0:0:6:197:-18.0529,-1.80618,0 dDocent_Contig_3861 98 . N G 116.536 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=115;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:30:-2.99957,-0.30103,0 1/1:2:0,2:0:0:2:65:-6.17353,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:20:-1.99996,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_3862 1 . N G 110.956 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=119;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:119:-11.095,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_3863 98 . N T 220.529 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=229;QR=0;RO=0;RPL=8;RPP=20.3821;RPPR=0;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:5:0,5:0:0:5:158:-14.5314,-1.50515,0 1/1:2:0,2:0:0:2:36:-3.41987,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_3864 18 . A G 374.347 . AB=0.111639;ABP=554.539;AC=3;AF=0.25;AN=12;AO=47;CIGAR=1X;DP=806;DPB=806;DPRA=1.09351;EPP=105.07;EPPR=1648.99;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.914894;PAIREDR=0.977573;PAO=0;PQA=0;PQR=0;PRO=0;QA=1871;QR=30397;RO=758;RPL=0;RPP=105.07;RPPR=1648.99;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=758;SRP=1648.99;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:105:94,11:94:3775:11:446:-8.88746,0,-308.141 0/1:176:159,17:159:6376:17:684:-8.90825,0,-520.593 0/0:70:69,0:69:2758:0:0:0,-20.7711,-248.016 0/1:140:121,19:121:4854:19:741:-24.8608,0,-394.602 0/0:182:182,0:182:7281:0:0:0,-54.7875,-654.912 0/0:133:133,0:133:5353:0:0:0,-40.037,-481.599 dDocent_Contig_3865 12 . A C 141.142 . AB=0.0904437;ABP=856.777;AC=1;AF=0.0833333;AN=12;AO=62;CIGAR=1X;DP=3643;DPB=3643;DPRA=1.22813;EPP=137.642;EPPR=7416.35;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=59.8698;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.97905;PAO=0;PQA=0;PQR=0;PRO=0;QA=2487;QR=142219;RO=3580;RPL=0;RPP=137.642;RPPR=7776.88;RPR=62;RUN=1;SAF=62;SAP=137.642;SAR=0;SRF=3538;SRP=7416.35;SRR=42;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:591:591,0:591:23434:0:0:0,-177.909,-2104.91 0/0:824:823,1:823:32640:1:39:0,-244.152,-2930.81 0/0:382:382,0:382:15206:0:0:0,-114.993,-1366.7 0/0:662:662,0:662:26300:0:0:0,-199.282,-2363.68 0/0:598:590,8:590:23441:8:315:0,-151.301,-2078.93 0/1:586:532,53:532:21198:53:2133:-15.6371,0,-1728.14 dDocent_Contig_3866 9 . T G 39000.7 . AB=0.209969;ABP=1175.69;AC=12;AF=1;AN=12;AO=337;CIGAR=1X1M;DP=1605;DPB=1605;DPRA=0;EPP=734.797;EPPR=352.617;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.22045e-16;PAIRED=0.970326;PAIREDR=0.975155;PAO=0;PQA=0;PQR=0;PRO=0;QA=12825;QR=6300;RO=161;RPL=0;RPP=734.797;RPPR=352.617;RPR=337;RUN=1;SAF=337;SAP=734.797;SAR=0;SRF=161;SRP=352.617;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:201:21,134,46:21:826:134,46:5112,1734:-487.179,-74.1252,-101.74,-351.413,0,-405.515 1|1:315:30,196,85:30:1164:196,85:7517,3241:-778.102,-170.234,-206.868,-521.257,0,-591.304 1|1:201:18,135,44:18:711:135,44:5132,1654:-492.41,-76.9764,-94.8504,-362.328,0,-407.592 1|1:254:8,192,50:8:315:192,50:7293,1917:-727.057,-131.42,-99.5378,-572.125,0,-582.988 1|1:345:46,235,63:46:1805:235,63:8973,2404:-770.909,-48.7596,-126.47,-587.539,0,-717.023 1|1:289:38,202,49:38:1479:202,49:7735,1875:-655.64,-32.3127,-93.0516,-513.216,0,-620.01 dDocent_Contig_3867 17 . T A 236.024 . AB=0.111111;ABP=369.507;AC=1;AF=0.0833333;AN=12;AO=67;CIGAR=1X;DP=1786;DPB=1786;DPRA=0.884496;EPP=148.499;EPPR=3733.6;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.991851;PAO=0;PQA=0;PQR=0;PRO=0;QA=2639;QR=68632;RO=1718;RPL=0;RPP=148.499;RPPR=3733.6;RPR=67;RUN=1;SAF=67;SAP=148.499;SAR=0;SRF=1718;SRP=3733.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:279:248,31:248:9899:31:1206:-24.8242,0,-806.288 0/0:358:336,22:336:13393:22:880:0,-28.2591,-1124.85 0/0:221:218,3:218:8729:3:123:0,-55.0628,-773.616 0/0:283:271,11:271:10863:11:430:0,-46.2507,-937.863 0/0:347:347,0:347:13889:0:0:0,-104.457,-1248.93 0/0:298:298,0:298:11859:0:0:0,-89.7069,-1066.47 dDocent_Contig_3868 12 . C A 44693.7 . AB=0.527215;ABP=21.0935;AC=6;AF=0.5;AN=12;AO=1482;CIGAR=1X;DP=2811;DPB=2811;DPRA=0;EPP=3221.13;EPPR=2880.21;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0.97031;PAIREDR=0.997736;PAO=0;PQA=0;PQR=0;PRO=0;QA=59223;QR=53249;RO=1325;RPL=0;RPP=3221.13;RPPR=2880.21;RPR=1482;RUN=1;SAF=1482;SAP=3221.13;SAR=0;SRF=1325;SRP=2880.21;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:472:232,240:232:9293:240:9558:-717.539,0,-693.696 0/1:515:237,276:237:9574:276:11047:-838.711,0,-706.23 0/1:260:120,140:120:4825:140:5562:-422.122,0,-355.861 0/1:470:226,242:226:9080:242:9687:-730.001,0,-675.4 0/1:579:276,303:276:11087:303:12151:-918.405,0,-822.725 0/1:515:234,281:234:9390:281:11218:-853.818,0,-689.448 dDocent_Contig_3869 44 . T G 425.123 . AB=0.517241;ABP=3.08518;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=105;DPB=105;DPRA=1.1;EPP=37.7539;EPPR=196.271;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=638;QR=3575;RO=89;RPL=0;RPP=37.7539;RPPR=196.271;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=89;SRP=196.271;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:15:7,8:7:282:8:315:-24.1971,0,-21.2371 0/0:26:25,1:25:1001:1:41:0,-3.73221,-86.2909 0/0:16:16,0:16:631:0:0:0,-4.81648,-57.1169 0/0:16:16,0:16:649:0:0:0,-4.81648,-58.7431 0/0:18:18,0:18:726:0:0:0,-5.41854,-65.6652 0/1:14:7,7:7:286:7:282:-21.5371,0,-21.9004 dDocent_Contig_3870 10 . C G 294.092 . AB=0.177778;ABP=84.1751;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=630;DPB=630;DPRA=0.833333;EPP=37.7539;EPPR=1336.29;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=641;QR=24623;RO=614;RPL=0;RPP=37.7539;RPPR=1336.29;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=614;SRP=1336.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:98:98,0:98:3945:0:0:0,-29.5009,-355.031 0/0:129:129,0:129:5163:0:0:0,-38.8329,-464.522 0/0:104:104,0:104:4187:0:0:0,-31.3071,-376.786 0/0:154:154,0:154:6175:0:0:0,-46.3586,-555.492 0/1:90:74,16:74:2938:16:641:-30.932,0,-237.427 0/0:55:55,0:55:2215:0:0:0,-16.5566,-199.516 dDocent_Contig_3871 45 . G T 1098.46 . AB=0.146067;ABP=584.038;AC=3;AF=0.25;AN=12;AO=85;CIGAR=1X;DP=1039;DPB=1039;DPRA=0.767073;EPP=187.585;EPPR=2074.59;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995807;PAO=0;PQA=0;PQR=0;PRO=0;QA=3340;QR=37478;RO=954;RPL=0;RPP=187.585;RPPR=2074.59;RPR=85;RUN=1;SAF=85;SAP=187.585;SAR=0;SRF=954;SRP=2074.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:144:130,14:130:5129:14:549:-6.39715,0,-418.142 0/1:144:114,30:114:4440:30:1155:-60.8805,0,-356.222 0/1:246:212,34:212:8415:34:1351:-47.7902,0,-682.852 0/0:95:88,7:88:3479:7:285:0,-2.57344,-287.14 0/0:195:195,0:195:7672:0:0:0,-58.7008,-690.109 0/0:215:215,0:215:8343:0:0:0,-64.7214,-750.471 dDocent_Contig_3872 61 . A G 2051.33 . AB=0.149563;ABP=980.088;AC=4;AF=0.333333;AN=12;AO=137;CIGAR=1X;DP=1947;DPB=1947;DPRA=0.444229;EPP=300.502;EPPR=3931.2;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.999447;PAO=0;PQA=0;PQR=0;PRO=0;QA=5412;QR=71195;RO=1809;RPL=137;RPP=300.502;RPPR=3931.2;RPR=0;RUN=1;SAF=137;SAP=300.502;SAR=0;SRF=1809;SRP=3931.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:92:70,22:70:2721:22:883:-52.0851,0,-217.322 0/1:384:321,62:321:12612:62:2396:-100.173,0,-1018.63 0/1:213:186,27:186:7361:27:1090:-34.2676,0,-598.019 0/1:227:201,26:201:7935:26:1043:-25.8296,0,-645.436 0/0:613:613,0:613:24198:0:0:0,-184.531,-2175.86 0/0:418:418,0:418:16368:0:0:0,-125.831,-1471.95 dDocent_Contig_3873 96 . A G 1123.1 . AB=0.0595238;ABP=144.57;AC=0;AF=0;AN=12;AO=5;CIGAR=2X;DP=411;DPB=411;DPRA=0.545455;EPP=13.8677;EPPR=741.311;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.4;PAIREDR=0.626471;PAO=0;PQA=0;PQR=0;PRO=0;QA=204;QR=12456;RO=340;RPL=0;RPP=13.8677;RPPR=36.1189;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=206;SRP=36.1189;SRR=134;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:80:59,0,21:59:2132:0,21:0,753:-43.9974,-61.7582,-235.75,0,-174.351,-168.03 0|0:72:60,0,12:60:2159:0,12:0,456:-19.7086,-37.7704,-213.881,0,-176.487,-172.874 0|0:98:86,0,12:86:3182:0,12:0,442:-10.6126,-36.5012,-296.775,0,-260.642,-257.03 0|0:77:77,0,0:77:2836:0,0:0,0:0,-23.1793,-255.426,-23.1793,-255.426,-255.426 0|0:37:20,4,13:20:746:4,13:164,486:-33.7411,-26.2169,-86.0796,0,-47.4942,-57.1232 0|0:47:38,1,8:38:1401:1,8:40,304:-13.472,-21.6139,-135.859,0,-111.229,-112.116 dDocent_Contig_3874 34 . T C 127169 . AB=0.790234;ABP=3853.74;AC=6;AF=0.5;AN=12;AO=4159;CIGAR=1X;DP=5263;DPB=5263;DPRA=0;EPP=9034.16;EPPR=2278.71;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999046;PAO=0;PQA=0;PQR=0;PRO=0;QA=158981;QR=38258;RO=1048;RPL=0;RPP=9034.16;RPPR=2278.71;RPR=4159;RUN=1;SAF=4159;SAP=9034.16;SAR=0;SRF=1048;SRP=2278.71;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:829:108,694:108:3955:694:26518:-2142.92,0,-114.266 0/1:960:151,798:151:5533:798:30391:-2446.96,0,-211.934 0/1:646:79,551:79:2902:551:21115:-1708.92,0,-71.3749 0/1:874:193,681:193:7068:681:26136:-2087.31,0,-372.93 0/1:1111:333,776:333:12083:776:29801:-2345.75,0,-752.917 0/1:843:184,659:184:6717:659:25020:-1996.26,0,-350.684 dDocent_Contig_3875 29 . G T 435.887 . AB=0.10775;ABP=709.97;AC=2;AF=0.166667;AN=12;AO=82;CIGAR=1X;DP=1977;DPB=1977;DPRA=0.760842;EPP=181.071;EPPR=4115.78;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=59.9974;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3272;QR=73536;RO=1894;RPL=0;RPP=181.071;RPPR=4115.78;RPR=82;RUN=1;SAF=82;SAP=181.071;SAR=0;SRF=1894;SRP=4115.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:340:306,34:306:11950:34:1367:-20.9381,0,-972.41 0/0:353:339,14:339:13230:14:564:0,-55.1603,-1138.77 0/1:189:165,23:165:6431:23:914:-25.8725,0,-521.868 0/0:311:300,11:300:11517:11:427:0,-54.8376,-997.109 0/0:397:397,0:397:15345:0:0:0,-119.509,-1380.03 0/0:387:387,0:387:15063:0:0:0,-116.499,-1354.64 dDocent_Contig_3876 32 . C T 338.4 . AB=0.108511;ABP=628.69;AC=4;AF=0.333333;AN=12;AO=57;CIGAR=1X;DP=599;DPB=599;DPRA=1.97818;EPP=126.784;EPPR=1175.61;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.994444;PAO=0;PQA=0;PQR=0;PRO=0;QA=2244;QR=21505;RO=540;RPL=0;RPP=126.784;RPPR=1175.61;RPR=57;RUN=1;SAF=57;SAP=126.784;SAR=0;SRF=540;SRP=1175.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:100:91,9:91:3600:9:345:-1.30271,0,-293.926 0/1:101:89,11:89:3547:11:436:-9.08863,0,-288.764 0/0:74:68,6:68:2744:6:240:0,-0.301071,-225.091 0/1:161:141,19:141:5612:19:744:-19.0099,0,-456.622 0/0:55:55,0:55:2162:0:0:0,-16.5566,-194.738 0/1:108:96,12:96:3840:12:479:-10.9487,0,-313.09 dDocent_Contig_3877 50 . C A 7718.65 . AB=0.0480769;ABP=556.485;AC=0;AF=0;AN=12;AO=15;CIGAR=1X2M1X;DP=1190;DPB=1189.75;DPRA=0;EPP=35.5824;EPPR=1857.45;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=590;QR=34072;RO=854;RPL=15;RPP=35.5824;RPPR=1857.45;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=854;SRP=1857.45;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:128:97,0,31:97:3898:0,31:0,1238:-73.1572,-102.357,-423.572,0,-321.614,-312.283 0|0:163:139,4,20:139:5543:4,20:156,781:-22.3405,-51.361,-506.635,0,-443.657,-450.458 0|0:85:57,0,27:57:2285:0,27:0,1082:-72.0866,-89.2453,-277.501,0,-188.362,-180.234 0|0:149:116,11,22:116:4614:11,22:434,886:-38.1107,-37.3239,-413.889,0,-344.175,-373.261 0|0:336:196,0,138:196:7834:0,138:0,5498:-393.744,-452.745,-1098.01,0,-645.285,-603.743 0|0:329:249,0,79:249:9898:0,79:0,3138:-183.648,-258.605,-1073.49,0,-815.183,-791.402 dDocent_Contig_3878 7 . C T 96400.2 . AB=0.147923;ABP=2128.39;AC=3;AF=0.25;AN=12;AO=339;CIGAR=1X1M2X;DP=3521;DPB=3521;DPRA=0.900313;EPP=739.139;EPPR=628.394;GTI=0;LEN=1;MEANALT=3.4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.996528;PAO=0;PQA=0;PQR=0;PRO=0;QA=12948;QR=10962;RO=288;RPL=0;RPP=739.139;RPPR=628.394;RPR=339;RUN=1;SAF=339;SAP=739.139;SAR=0;SRF=288;SRP=628.394;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:482:32,24,408:32:1215:24,408:908,16120:-1339.96,-1275.16,-1367.57,-23.188,-48.3891,0 0|0:640:50,0,587:50:1912:0,587:0,23299:-1922.64,-1937.69,-2094.59,-19.7519,-176.705,0 0|0:425:21,23,373:21:806:23,373:871,14695:-1248.61,-1183.52,-1242.76,-46.1237,-40.8801,0 1|0:626:54,63,500:54:2061:63,500:2401,19843:-1644.98,-1464.28,-1614.4,-27.8671,0,-46.4412 1|0:703:59,98,546:59:2231:98,546:3745,21662:-1889.72,-1600.2,-1753.58,-124.409,0,-142.922 1|0:645:72,131,440:72:2737:131,440:5023,17415:-1599.33,-1208.73,-1393.76,-187.814,0,-279.824 dDocent_Contig_3879 36 . A G 128.77 . AB=0.147541;ABP=68.8308;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=333;DPB=333;DPRA=1.12132;EPP=22.5536;EPPR=706.567;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.444444;PAIREDR=0.848765;PAO=0;PQA=0;PQR=0;PRO=0;QA=360;QR=12951;RO=324;RPL=0;RPP=22.5536;RPPR=706.567;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=324;SRP=706.567;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:59,0:59:2374:0:0:0,-17.7608,-213.812 0/1:61:52,9:52:2057:9:360:-14.3998,0,-166.957 0/0:53:53,0:53:2132:0:0:0,-15.9546,-192.055 0/0:55:55,0:55:2202:0:0:0,-16.5566,-198.349 0/0:53:53,0:53:2117:0:0:0,-15.9546,-190.709 0/0:52:52,0:52:2069:0:0:0,-15.6536,-186.398 dDocent_Contig_3880 67 . C T 1651.32 . AB=0.252632;ABP=154.488;AC=4;AF=0.333333;AN=12;AO=72;CIGAR=1X;DP=426;DPB=426;DPRA=1.01064;EPP=159.356;EPPR=771.712;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.972222;PAIREDR=0.923729;PAO=0;PQA=0;PQR=0;PRO=0;QA=2854;QR=13910;RO=354;RPL=72;RPP=159.356;RPPR=771.712;RPR=0;RUN=1;SAF=72;SAP=159.356;SAR=0;SRF=354;SRP=771.712;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:49:43,6:43:1640:6:234:-6.67617,0,-133.079 0/1:102:78,24:78:3069:24:956:-55.6354,0,-245.591 0/1:70:40,30:40:1582:30:1205:-87.6535,0,-121.538 0/1:64:52,12:52:2053:12:459:-22.3888,0,-165.698 0/0:56:56,0:56:2201:0:0:0,-16.8577,-198.261 0/0:85:85,0:85:3365:0:0:0,-25.5875,-302.903 dDocent_Contig_3881 9 . T A 21671 . AB=0.589865;ABP=91.604;AC=6;AF=0.5;AN=12;AO=745;CIGAR=1X;DP=1263;DPB=1263;DPRA=0;EPP=1620.76;EPPR=1123.49;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997315;PAIREDR=0.972868;PAO=0;PQA=0;PQR=0;PRO=0;QA=28424;QR=19740;RO=516;RPL=0;RPP=1620.76;RPPR=1123.49;RPR=745;RUN=1;SAF=745;SAP=1620.76;SAR=0;SRF=516;SRP=1123.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:195:42,153:42:1616:153:5823:-465.336,0,-87.0054 0/1:250:71,178:71:2719:178:6806:-537.086,0,-169.552 0/1:196:53,143:53:2031:143:5462:-432.565,0,-124.023 0/1:224:75,148:75:2903:148:5639:-440.26,0,-194.204 0/1:218:137,81:137:5220:81:3096:-213.172,0,-404.186 0/1:180:138,42:138:5251:42:1598:-89.9021,0,-418.409 dDocent_Contig_3882 107 . N A 87.7145 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=94;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:94:-8.77091,-0.90309,0 ./.:.:.:.:.:.:.:. dDocent_Contig_3883 1 . N G 174.663 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=8.07091;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=190;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:190:-17.4662,-1.50515,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_3884 26 . C A 8138.43 . AB=0.4;ABP=61.2058;AC=4;AF=0.333333;AN=12;AO=268;CIGAR=1X1M1X2M;DP=840;DPB=840;DPRA=1.92529;EPP=584.965;EPPR=998.193;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.856846;PAO=0;PQA=0;PQR=0;PRO=0;QA=10508;QR=18516;RO=482;RPL=0;RPP=584.965;RPPR=1049.66;RPR=268;RUN=1;SAF=268;SAP=584.965;SAR=0;SRF=476;SRP=998.193;SRR=6;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:182:101,14,62,5:101:3862:14,62,5:534,2441,174:-170.408,-157.013,-469.669,0,-273.082,-298.219,-186.675,-459.744,-302.744,-502.039 0|1:182:70,5,96,9:70:2722:5,96,9:196,3730,327:-285.427,-290.383,-512.562,0,-207.595,-194.812,-279.808,-487.376,-197.02,-500.782 0|1:145:71,4,62,7:71:2719:4,62,7:157,2453,284:-180.517,-188.978,-410.894,0,-210.219,-204.468,-178.467,-388.676,-199.708,-399.481 0|1:161:97,8,48,7:97:3709:8,48,7:321,1884,277:-125.733,-128.482,-430.383,0,-277.851,-289.853,-132.139,-409.997,-281.508,-434.34 0|0:83:58,0,0,24:58:2233:0,0,24:0,0,953:-60.9796,-78.4394,-261.755,-78.4394,-261.755,-261.755,0,-183.309,-183.309,-176.085 0|0:87:85,0,0,0:85:3271:0,0,0:0,0,0:0,-25.5875,-294.264,-25.5875,-294.264,-294.264,-25.5875,-294.264,-294.264,-294.264 dDocent_Contig_3885 16 . C T 18072.9 . AB=0.0235294;ABP=841.071;AC=0;AF=0;AN=12;AO=10;CIGAR=1X2M1X2M1X;DP=1032;DPB=1032;DPRA=0;EPP=24.725;EPPR=637.08;GTI=0;LEN=1;MEANALT=4;MQM=37.3;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=393;QR=11351;RO=292;RPL=0;RPP=24.725;RPPR=637.08;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=292;SRP=637.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:192:76,4,108:76:2947:4,108:158,4213:-261.885,-274.625,-515.552,0,-232.078,-209.702 0|0:170:53,2,110:53:2082:2,110:77,4299:-260.113,-269.766,-440.426,0,-164.987,-138.174 0|0:63:18,4,40:18:689:4,40:158,1566:-90.0542,-84.8266,-140.183,0,-45.9778,-44.5731 0|0:138:36,0,101:36:1413:0,101:0,3935:-257.432,-268.269,-384.495,0,-116.396,-85.992 0|0:217:56,0,159:56:2157:0,159:0,6298:-417.461,-434.319,-611.424,0,-177.093,-129.229 0|0:252:53,0,195:53:2063:0,195:0,7665:-531.567,-547.522,-717.075,0,-169.756,-111.055 dDocent_Contig_3886 15 . G A 8039.24 . AB=0.223039;ABP=1090.36;AC=5;AF=0.416667;AN=12;AO=397;CIGAR=1X;DP=2132;DPB=2132;DPRA=0;EPP=865.085;EPPR=3770.51;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997118;PAO=0;PQA=0;PQR=0;PRO=0;QA=15807;QR=69066;RO=1735;RPL=0;RPP=865.085;RPPR=3770.51;RPR=397;RUN=1;SAF=397;SAP=865.085;SAR=0;SRF=1735;SRP=3770.51;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:229:182,47:182:7200:47:1872:-99.7472,0,-578.722 0/1:223:193,30:193:7679:30:1185:-39.7978,0,-623.577 0/1:170:152,18:152:6042:18:727:-14.5802,0,-492.379 0/1:357:314,43:314:12566:43:1712:-46.8387,0,-1022.57 0/1:653:427,226:427:16969:226:8992:-612.182,0,-1329.29 0/0:500:467,33:467:18610:33:1319:0,-31.5431,-1554.4 dDocent_Contig_3887 8 . A G 109.983 . AB=0.102459;ABP=337.951;AC=1;AF=0.0833333;AN=12;AO=27;CIGAR=1X;DP=1306;DPB=1306;DPRA=0.755274;EPP=61.6401;EPPR=2775.98;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994518;PAO=0;PQA=0;PQR=0;PRO=0;QA=1026;QR=48862;RO=1277;RPL=0;RPP=61.6401;RPPR=2775.98;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=1277;SRP=2775.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:244:218,25:218:8313:25:949:-12.2201,0,-674.458 0/0:217:217,0:217:8288:0:0:0,-65.3235,-745.706 0/0:114:112,2:112:4299:2:77:0,-27.0083,-379.671 0/0:225:225,0:225:8544:0:0:0,-67.7317,-768.731 0/0:250:250,0:250:9624:0:0:0,-75.2575,-865.837 0/0:256:255,0:255:9794:0:0:0,-76.7626,-880.831 dDocent_Contig_3888 7 . C T 481.859 . AB=0.103448;ABP=82.2316;AC=0;AF=0;AN=12;AO=6;CIGAR=1X3M1X2M1X;DP=493;DPB=493;DPRA=0.64684;EPP=16.0391;EPPR=928.058;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.931925;PAO=0;PQA=0;PQR=0;PRO=0;QA=230;QR=16596;RO=426;RPL=0;RPP=16.0391;RPPR=928.058;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=426;SRP=928.058;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:41:41,0,0,0:41:1604:0,0,0:0,0,0:0,-12.3422,-144.616,-12.3422,-144.616,-144.616,-12.3422,-144.616,-144.616,-144.616 0|0:109:94,13,0,0:94:3670:13,0,0:498,0,0:-12.5908,0,-297.811,-40.8876,-301.725,-342.592,-40.8876,-301.725,-342.592,-342.592 0|0:58:37,15,6,0:37:1432:15,6,0:579,230,0:-36.4115,0,-113.114,-28.6756,-98.7557,-144.497,-47.5496,-117.63,-146.303,-165.177 0|0:57:49,6,0,0:49:1905:6,0,0:233,0,0:-4.40526,0,-154.754,-19.1557,-156.56,-175.702,-19.1557,-156.56,-175.702,-175.702 0|0:67:64,3,0,0:64:2484:3,0,0:120,0,0:0,-8.98111,-212.555,-19.2659,-213.458,-223.344,-19.2659,-213.458,-223.344,-223.344 0|0:161:141,9,0,10:141:5501:9,0,10:344,0,405:0,-14.2359,-463.698,-42.4452,-466.407,-494.626,-9.03867,-433.011,-461.229,-458.219 dDocent_Contig_3889 98 . N T 258.907 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=266;QR=0;RO=0;RPL=8;RPP=20.3821;RPPR=0;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:130:-12.0217,-1.20412,0 1/1:2:0,2:0:0:2:66:-6.26818,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_3890 7 . C T 96.5967 . AB=0.0909091;ABP=1250.23;AC=1;AF=0.0833333;AN=12;AO=186;CIGAR=2X;DP=5575;DPB=5575;DPRA=0.968763;EPP=406.904;EPPR=11679;GTI=0;LEN=1;MEANALT=2.6;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999628;PAO=0;PQA=0;PQR=0;PRO=0;QA=7076;QR=205598;RO=5377;RPL=0;RPP=406.904;RPPR=11679;RPR=186;RUN=1;SAF=186;SAP=406.904;SAR=0;SRF=5377;SRP=11679;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:858:777,78:777:29698:78:2983:-10.8815,0,-2413.34 0|0:1037:993,44:993:37952:44:1680:0,-160.704,-3261.91 0|0:778:750,24:750:28749:24:909:0,-151.258,-2503.6 0|0:784:774,9:774:29604:9:338:0,-205.259,-2631.87 0|0:1164:1131,31:1131:43194:31:1166:0,-244.891,-3779.56 0|0:954:952,0:952:36401:0:0:0,-286.581,-3273.64 dDocent_Contig_3891 60 . C T 3690.88 . AB=0.150564;ABP=2165.56;AC=2;AF=0.166667;AN=12;AO=311;CIGAR=1X;DP=5844;DPB=5844;DPRA=1.12786;EPP=678.338;EPPR=12009.1;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999457;PAO=0;PQA=0;PQR=0;PRO=0;QA=11085;QR=214803;RO=5529;RPL=311;RPP=678.338;RPPR=12009.1;RPR=0;RUN=1;SAF=311;SAP=678.338;SAR=0;SRF=5529;SRP=12009.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:885:882,1:882:34260:1:38:0,-262.302,-3076.96 0/0:1125:1122,3:1122:43495:3:95:0,-329.797,-3902.02 0/0:772:772,0:772:30106:0:0:0,-232.395,-2707.01 0/0:1023:1023,0:1023:39653:0:0:0,-307.954,-3565.48 0/1:1080:913,165:913:35622:165:5904:-206.605,0,-2878.23 0/1:959:817,142:817:31667:142:5048:-165.705,0,-2558.75 dDocent_Contig_3892 20 . T C 156.151 . AB=0.148649;ABP=82.3571;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=1382;DPB=1382;DPRA=0.701857;EPP=29.068;EPPR=2977.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=474;QR=51120;RO=1370;RPL=0;RPP=29.068;RPPR=2977.93;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=1370;SRP=2977.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:285:284,1:284:10572:1:40:0,-81.7979,-947.139 0/0:426:426,0:426:15918:0:0:0,-128.239,-1431.91 0/0:148:148,0:148:5600:0:0:0,-44.5524,-503.982 0/0:409:409,0:409:15189:0:0:0,-123.121,-1366.39 0/1:74:63,11:63:2362:11:434:-17.138,0,-190.523 0/0:40:40,0:40:1479:0:0:0,-12.0412,-133.371 dDocent_Contig_3893 12 . A T 4779.58 . AB=0.395294;ABP=43.4814;AC=3;AF=0.25;AN=12;AO=169;CIGAR=1X;DP=827;DPB=827;DPRA=1.16734;EPP=369.989;EPPR=1431.84;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6823;QR=26170;RO=658;RPL=0;RPP=369.989;RPPR=1431.84;RPR=169;RUN=1;SAF=169;SAP=369.989;SAR=0;SRF=658;SRP=1431.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:129:52,77:52:2070:77:3111:-241.215,0,-147.658 0/1:142:102,40:102:4065:40:1613:-102.652,0,-323.087 0/0:154:153,1:153:6101:1:38:0,-42.5613,-545.056 0/1:154:103,51:103:4082:51:2061:-139.313,0,-321.014 0/0:112:112,0:112:4472:0:0:0,-33.7154,-402.412 0/0:136:136,0:136:5380:0:0:0,-40.9401,-484.058 dDocent_Contig_3894 41 . T C 488.375 . AB=0.311475;ABP=21.8416;AC=1;AF=0.0833333;AN=12;AO=21;CIGAR=1X;DP=374;DPB=374;DPRA=0.947917;EPP=48.6112;EPPR=769.54;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994334;PAO=0;PQA=0;PQR=0;PRO=0;QA=842;QR=13964;RO=353;RPL=0;RPP=48.6112;RPPR=769.54;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=353;SRP=769.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:61:61,0:61:2402:0:0:0,-18.3628,-216.337 0/1:61:42,19:42:1692:19:760:-50.3604,0,-134.136 0/0:37:36,1:36:1373:1:41:0,-7.04354,-119.735 0/0:84:83,1:83:3303:1:41:0,-21.192,-293.242 0/0:61:61,0:61:2443:0:0:0,-18.3628,-220.019 0/0:70:70,0:70:2751:0:0:0,-21.0721,-247.708 dDocent_Contig_3897 16 . G C 54485.1 . AB=0.569116;ABP=131.182;AC=6;AF=0.5;AN=12;AO=1758;CIGAR=1X7M1X3M;DP=3089;DPB=3108.33;DPRA=0;EPP=3820.46;EPPR=1768.42;GTI=0;LEN=1;MEANALT=6.66667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.998294;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=69339;QR=31555;RO=813;RPL=0;RPP=3820.46;RPPR=1768.42;RPR=1758;RUN=1;SAF=1758;SAP=3820.46;SAR=0;SRF=813;SRP=1768.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:386:101,51,14,218:101:3894:51,14,218:2011,546,8547:-672.379,-537.335,-841.733,-657.908,-812.21,-973.445,0,-154.299,-274.875,-254.126 0|1:502:205,81,33,177:205:7979:81,33,177:3213,1266,6993:-513.679,-310.913,-942.279,-471.505,-862.777,-1117.32,0,-391.273,-551.865,-602.469 0|1:399:100,37,38,208:100:3912:37,38,208:1461,1454,8215:-645.816,-555.703,-866.21,-556.645,-758.074,-866.851,0,-201.43,-202.374,-259.033 0|1:440:161,52,0,223:161:6230:52,0,223:2062,0,8819:-677.25,-555.988,-1052.07,-725.716,-1067.72,-1237.45,0,-342.001,-511.731,-444.601 0|1:721:149,30,82,455:149:5763:30,82,455:1193,3254,17977:-1434.32,-1380.94,-1845.27,-1211.32,-1586.45,-1659.99,0,-375.131,-205.5,-336.389 0|1:641:97,0,63,477:97:3777:0,63,477:0,2483,18788:-1516.29,-1545.49,-1855.91,-1341.22,-1651.64,-1632.67,0,-310.419,-106.147,-166.828 dDocent_Contig_3898 62 . G A 1217.9 . AB=0.123299;ABP=1542.48;AC=5;AF=0.416667;AN=12;AO=168;CIGAR=1X;DP=1571;DPB=1571;DPRA=0;EPP=367.818;EPPR=3049.59;GTI=0;LEN=1;MEANALT=1;MQM=59.631;MQMR=59.9401;NS=6;NUMALT=1;ODDS=0;PAIRED=0.982143;PAIREDR=0.983607;PAO=0;PQA=0;PQR=0;PRO=0;QA=6146;QR=51137;RO=1403;RPL=168;RPP=367.818;RPPR=3049.59;RPR=0;RUN=1;SAF=168;SAP=367.818;SAR=0;SRF=1403;SRP=3049.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:262:236,26:236:8651:26:964:-8.19732,0,-699.515 0/0:322:308,14:308:11156:14:528:0,-49.07,-955.771 0/1:137:122,15:122:4335:15:505:-4.51864,0,-348.995 0/1:248:223,25:223:8103:25:893:-6.0054,0,-654.406 0/1:309:261,48:261:9610:48:1760:-65.5968,0,-771.599 0/1:293:253,40:253:9282:40:1496:-46.6939,0,-746.928 dDocent_Contig_3899 23 . G A 617.747 . AB=0.107477;ABP=1148.57;AC=3;AF=0.25;AN=12;AO=107;CIGAR=1X;DP=1750;DPB=1750;DPRA=0.929032;EPP=235.358;EPPR=3570.74;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996348;PAO=0;PQA=0;PQR=0;PRO=0;QA=4207;QR=64594;RO=1643;RPL=0;RPP=235.358;RPPR=3570.74;RPR=107;RUN=1;SAF=107;SAP=235.358;SAR=0;SRF=1643;SRP=3570.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:358:319,39:319:12530:39:1525:-29.722,0,-1019.1 0/1:325:287,38:287:11203:38:1473:-34.9797,0,-909.77 0/1:173:158,15:158:6239:15:600:-2.25649,0,-509.208 0/0:264:260,4:260:10299:4:164:0,-64.322,-911.16 0/0:320:309,11:309:12195:11:445:0,-55.9233,-1056.34 0/0:310:310,0:310:12128:0:0:0,-93.3193,-1090.74 dDocent_Contig_3900 12 . A T 118.949 . AB=0.118812;ABP=130.482;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=613;DPB=613;DPRA=0.986328;EPP=29.068;EPPR=1305.89;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.951667;PAO=0;PQA=0;PQR=0;PRO=0;QA=483;QR=23594;RO=600;RPL=0;RPP=29.068;RPPR=1305.89;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=600;SRP=1305.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:73:72,0:72:2875:0:0:0,-21.6742,-258.44 0/0:142:142,0:142:5553:0:0:0,-42.7463,-499.63 0/0:80:80,0:80:3119:0:0:0,-24.0824,-280.787 0/1:101:89,12:89:3501:12:483:-13.4178,0,-284.739 0/0:128:128,0:128:5044:0:0:0,-38.5318,-453.86 0/0:89:89,0:89:3502:0:0:0,-26.7917,-315.228 dDocent_Contig_3901 114 . G A 368.184 . AB=0.15534;ABP=321.837;AC=2;AF=0.166667;AN=12;AO=51;CIGAR=1X;DP=951;DPB=951;DPRA=0.774799;EPP=113.755;EPPR=1957.34;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1563;QR=30247;RO=900;RPL=0;RPP=113.755;RPPR=1957.34;RPR=51;RUN=1;SAF=0;SAP=113.755;SAR=51;SRF=0;SRP=1957.34;SRR=900;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:128:127,1:127:4286:1:25:0,-36.032,-383.446 0/0:135:135,0:135:4505:0:0:0,-40.639,-405.649 0/0:238:238,0:238:8061:0:0:0,-71.6451,-725.577 0/0:141:139,2:139:4619:2:66:0,-36.1769,-409.636 0/1:146:121,25:121:4087:25:722:-21.3018,0,-324.092 0/1:163:140,23:140:4689:23:750:-18.7385,0,-373.138 dDocent_Contig_3902 98 . N G 2006.48 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=64;CIGAR=1X;DP=66;DPB=66;DPRA=0;EPP=141.985;EPPR=0;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=8.67362e-19;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2205;QR=0;RO=0;RPL=64;RPP=141.985;RPPR=0;RPR=0;RUN=1;SAF=64;SAP=141.985;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:141:-13.0371,-1.20412,0 1/1:22:0,21:0:0:21:701:-63.1273,-6.32163,0 1/1:6:0,6:0:0:6:209:-19.1509,-1.80618,0 1/1:19:0,19:0:0:19:665:-60.1762,-5.71957,0 1/1:12:0,11:0:0:11:384:-34.5824,-3.31133,0 1/1:3:0,3:0:0:3:105:-9.79609,-0.90309,0 dDocent_Contig_3903 107 . N T 133.126 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=137;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:67:-6.36304,-0.60206,0 dDocent_Contig_3904 62 . T C 227.638 . AB=0.0853659;ABP=247.91;AC=1;AF=0.0833333;AN=12;AO=47;CIGAR=1M1X9M1X4M;DP=952;DPB=966.938;DPRA=0;EPP=105.07;EPPR=1742.36;GTI=0;LEN=1;MEANALT=5.2;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.998752;PAO=0;PQA=0;PQR=0;PRO=0;QA=1763;QR=30620;RO=801;RPL=47;RPP=105.07;RPPR=1742.36;RPR=0;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=801;SRP=1742.36;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:151:130,10,0,7,0:130:4960:10,0,7,0:370,0,250,0:0,-8.86288,-412.768,-39.1339,-415.779,-446.047,-18.7581,-395.399,-425.667,-423.56,-39.1339,-415.779,-446.047,-425.667,-446.047 0|0:199:158,13,0,10,12:158:6038:13,0,10,12:489,0,327,449:0,-7.48882,-499.007,-47.5627,-502.92,-542.984,-21.1688,-476.521,-516.584,-513.574,-10.7869,-466.153,-506.217,-479.817,-502.604 0|0:77:57,0,0,4,14:57:2175:0,0,4,14:0,0,142,507:-24.2852,-41.4439,-219.898,-41.4439,-219.898,-219.898,-29.872,-208.331,-208.331,-207.127,0,-178.512,-178.512,-166.945,-174.297 0|1:164:140,14,0,8,1:140:5369:14,0,8,1:519,0,292,38:-0.324988,0,-436.456,-42.4692,-440.671,-483.133,-18.6151,-416.817,-459.279,-456.871,-39.3521,-437.554,-480.016,-456.162,-479.715 0|0:177:155,6,12,0,0:155:5923:6,12,0,0:230,471,0,0:0,-27.7792,-511.945,-7.90322,-475.014,-490.279,-46.6596,-513.751,-493.892,-532.629,-46.6596,-513.751,-493.892,-532.629,-532.629 0|0:184:161,4,14,0,0:161:6155:4,14,0,0:155,539,0,0:0,-35.7261,-539.562,-4.17202,-496.513,-505.032,-48.4658,-540.766,-509.247,-553.5,-48.4658,-540.766,-509.247,-553.5,-553.5 dDocent_Contig_3905 14 . G C 500.247 . AB=0.147186;ABP=252.767;AC=3;AF=0.25;AN=12;AO=40;CIGAR=1X;DP=401;DPB=401;DPRA=4.51765;EPP=89.8692;EPPR=765.294;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=59.8496;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.727019;PAO=0;PQA=0;PQR=0;PRO=0;QA=1606;QR=14167;RO=359;RPL=0;RPP=89.8692;RPPR=782.569;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=357;SRP=765.294;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:73:68,5:68:2708:5:203:0,-3.32213,-225.164 0/1:92:84,8:84:3301:8:325:-1.92488,0,-269.463 0/1:53:48,5:48:1864:5:201:-2.51651,0,-152.012 0/0:80:77,1:77:3077:1:30:0,-20.8139,-273.946 0/0:17:17,0:17:636:0:0:0,-5.11751,-57.555 0/1:86:65,21:65:2581:21:847:-50.6541,0,-204.283 dDocent_Contig_3906 169 . C T 19139.1 . AB=0.389228;ABP=194.96;AC=6;AF=0.5;AN=12;AO=701;CIGAR=1X;DP=1801;DPB=1801;DPRA=0;EPP=1381.13;EPPR=2229.45;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.972896;PAIREDR=0.987273;PAO=0;PQA=0;PQR=0;PRO=0;QA=27418;QR=43051;RO=1100;RPL=684;RPP=1381.13;RPPR=2229.45;RPR=17;RUN=1;SAF=0;SAP=1525.21;SAR=701;SRF=0;SRP=2391.63;SRR=1100;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:287:183,104:183:7154:104:4040:-277.2,0,-557.157 0/1:385:281,104:281:10869:104:4056:-249.144,0,-861.677 0/1:217:88,129:88:3467:129:5043:-388.436,0,-246.744 0/1:300:172,128:172:6722:128:5011:-360.577,0,-514.406 0/1:314:204,110:204:8086:110:4370:-298.73,0,-632.799 0/1:298:172,126:172:6753:126:4898:-351.041,0,-517.773 dDocent_Contig_3907 9 . T C 586.862 . AB=0.186441;ABP=154.167;AC=2;AF=0.166667;AN=12;AO=42;CIGAR=1X;DP=508;DPB=508;DPRA=1.10256;EPP=94.2121;EPPR=1006.23;GTI=0;LEN=1;MEANALT=1.6;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.238095;PAIREDR=0.487013;PAO=0;PQA=0;PQR=0;PRO=0;QA=1588;QR=17610;RO=462;RPL=0;RPP=94.2121;RPPR=1006.23;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=462;SRP=1006.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:78:78,0:78:2965:0:0:0,-23.4803,-267.019 0/0:100:96,3:96:3679:3:116:0,-19.3731,-320.411 0/0:82:78,4:78:2957:4:134:0,-12.299,-253.919 0/0:71:69,2:69:2625:2:67:0,-15.0101,-230.083 0/1:107:84,22:84:3194:22:849:-44.4338,0,-255.316 0/1:70:57,11:57:2190:11:422:-17.4742,0,-176.464 dDocent_Contig_3908 38 . T C 981.859 . AB=0.107143;ABP=340.829;AC=2;AF=0.166667;AN=12;AO=42;CIGAR=1X2M;DP=593;DPB=593;DPRA=1.19529;EPP=94.2121;EPPR=1080.06;GTI=0;LEN=1;MEANALT=2.2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.880952;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1677;QR=19395;RO=496;RPL=0;RPP=94.2121;RPPR=1080.06;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=496;SRP=1080.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:101:92,0,7:92:3616:0,7:0,281:0,-27.6948,-325.148,-4.36889,-301.993,-299.886 0|0:70:66,0,4:66:2582:0,4:0,161:0,-19.868,-232.139,-6.19661,-218.869,-217.665 0|0:85:80,0,4:80:3143:0,4:0,162:0,-24.0824,-282.603,-10.5925,-269.244,-268.04 0|0:85:82,0,0:82:3221:0,0:0,0:0,-24.6845,-289.591,-24.6845,-289.591,-289.591 0|1:127:86,28,12:86:3349:28,12:1099,482:-64.4881,0,-266.782,-50.6573,-235.493,-322.263 0|1:125:90,20,15:90:3484:20,15:779,591:-36.9196,0,-280.141,-15.391,-237.541,-297.041 dDocent_Contig_3909 59 . G T 756.708 . AB=0.300971;ABP=38.4496;AC=3;AF=0.25;AN=12;AO=31;CIGAR=1X;DP=181;DPB=181;DPRA=1.32051;EPP=70.3259;EPPR=328.731;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1231;QR=5925;RO=150;RPL=31;RPP=70.3259;RPPR=328.731;RPR=0;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=150;SRP=328.731;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:27,3:27:1077:3:121:-2.2493,0,-88.1861 0/0:22:22,0:22:866:0:0:0,-6.62266,-78.2488 0/1:37:22,15:22:851:15:599:-43.11,0,-65.756 0/1:36:23,13:23:911:13:511:-35.4943,0,-71.455 0/0:11:11,0:11:436:0:0:0,-3.31133,-39.5918 0/0:45:45,0:45:1784:0:0:0,-13.5463,-160.779 dDocent_Contig_3910 45 . G T 45.8884 . AB=0.111111;ABP=73.9451;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=404;DPB=404;DPRA=1.13178;EPP=20.3821;EPPR=862.913;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.727273;PAO=0;PQA=0;PQR=0;PRO=0;QA=322;QR=15728;RO=396;RPL=0;RPP=20.3821;RPPR=862.913;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=396;SRP=862.913;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:48,6:48:1906:6:241:-5.81068,0,-155.487 0/0:92:90,2:90:3592:2:81:0,-20.009,-315.62 0/0:63:63,0:63:2538:0:0:0,-18.9649,-228.554 0/0:61:61,0:61:2385:0:0:0,-18.3628,-214.809 0/0:63:63,0:63:2484:0:0:0,-18.9649,-223.706 0/0:71:71,0:71:2823:0:0:0,-21.3731,-254.181 dDocent_Contig_3911 36 . A T 4856.17 . AB=0.0216486;ABP=2390;AC=0;AF=0;AN=12;AO=26;CIGAR=7M1X12M;DP=1684;DPB=1642.4;DPRA=0;EPP=59.4686;EPPR=1308.07;GTI=0;LEN=1;MEANALT=40;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.998336;PAO=0;PQA=0;PQR=0;PRO=0;QA=964;QR=23502;RO=601;RPL=0;RPP=59.4686;RPPR=1308.07;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=601;SRP=1308.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:215:89,28,12,8,2:89:3516:28,12,8,2:1099,463,289,74:-63.5959,0,-280.911,-52.3679,-251.32,-338.093,-66.8141,-265.766,-318.131,-353.742,-84.3341,-283.286,-335.652,-350.097,-373.068 0|0:261:76,40,29,22,0:76:2934:40,29,22,0:1490,1052,866,0:-99.0655,0,-228.904,-36.0687,-155.07,-268.283,-50.7114,-169.714,-205.782,-285.034,-121.944,-240.945,-277.013,-291.657,-362.888 0|0:440:162,52,37,28,3:162:6347:52,37,28,3:1976,1389,1108,111:-113.25,0,-506.264,-48.2603,-408.161,-559.039,-70.8358,-430.737,-478.997,-584.325,-152.936,-512.837,-561.097,-583.673,-673.95 0|0:222:67,34,22,11,0:67:2631:34,22,11,0:1308,829,431,0:-87.2091,0,-206.161,-39.4557,-148.475,-249.228,-71.9397,-180.958,-220.413,-285.024,-107.378,-216.396,-255.851,-288.335,-323.773 0|0:289:131,14,31,21,8:131:5103:14,31,21,8:529,1191,839,297:-58.3238,-54.4006,-469.594,0,-376.052,-410.077,-28.651,-404.703,-350.304,-441.739,-73.4543,-449.504,-395.105,-423.756,-490.453 0|0:257:76,11,32,23,13:76:2971:11,32,23,13:423,1200,903,482:-75.3947,-63.5457,-304.496,0,-209.536,-234.63,-24.0075,-233.544,-169.999,-261.347,-58.8348,-268.37,-204.825,-228.833,-299.183 dDocent_Contig_3912 1 . N G 76.8682 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_3913 13 . A T 6551.38 . AB=0.267155;ABP=517.729;AC=6;AF=0.5;AN=12;AO=292;CIGAR=1X;DP=1093;DPB=1093;DPRA=0;EPP=637.08;EPPR=1735.85;GTI=0;LEN=1;MEANALT=1.33333;MQM=57.8973;MQMR=59.9211;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.972431;PAO=0;PQA=0;PQR=0;PRO=0;QA=11082;QR=31682;RO=798;RPL=0;RPP=637.08;RPPR=1735.85;RPR=292;RUN=1;SAF=292;SAP=637.08;SAR=0;SRF=798;SRP=1735.85;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:135:95,40:95:3753:40:1524:-96.529,0,-297.138 0/1:181:144,37:144:5676:37:1423:-72.0436,0,-456.09 0/1:154:105,49:105:4239:49:1885:-123.035,0,-335.024 0/1:193:123,67:123:4880:67:2553:-171.705,0,-381.555 0/1:201:145,56:145:5721:56:2097:-127.877,0,-454.195 0/1:229:186,43:186:7413:43:1600:-75.1694,0,-597.867 dDocent_Contig_3914 1 . N G 15591.4 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=508;CIGAR=1X;DP=508;DPB=508;DPRA=0;EPP=1088.81;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=17298;QR=0;RO=0;RPL=0;RPP=1106.12;RPPR=0;RPR=508;RUN=1;SAF=2;SAP=1088.81;SAR=506;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:95:0,95:0:0:95:3227:-290.661,-28.5979,0 1/1:114:0,114:0:0:114:3914:-352.473,-34.3174,0 1/1:69:0,69:0:0:69:2322:-209.244,-20.7711,0 1/1:83:0,83:0:0:83:2842:-256.03,-24.9855,0 1/1:68:0,68:0:0:68:2332:-210.147,-20.47,0 1/1:79:0,79:0:0:79:2661:-239.743,-23.7814,0 dDocent_Contig_3916 107 . N T 141.764 . AB=0;ABP=0;AC=6;AF=0.75;AN=8;AO=5;CIGAR=1X;DP=6;DPB=6;DPRA=1.66667;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=139;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 1/1:3:0,3:0:0:3:75:-6.99797,-0.90309,0 0/0:1:0,0:0:0:0:0:0,0,0 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_3917 33 . A G 338.161 . AB=0.107551;ABP=587.613;AC=1;AF=0.0833333;AN=12;AO=67;CIGAR=1X;DP=1887;DPB=1887;DPRA=1.46023;EPP=148.499;EPPR=3952.92;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.985075;PAIREDR=0.99945;PAO=0;PQA=0;PQR=0;PRO=0;QA=2634;QR=72553;RO=1819;RPL=0;RPP=148.499;RPPR=3952.92;RPR=67;RUN=1;SAF=67;SAP=148.499;SAR=0;SRF=1819;SRP=3952.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:234:234,0:234:9374:0:0:0,-70.441,-843.088 0/0:299:298,0:298:11903:0:0:0,-89.7069,-1070.35 0/0:234:234,0:234:9416:0:0:0,-70.441,-846.829 0/0:227:225,2:225:8868:2:68:0,-61.8792,-791.172 0/1:437:390,47:390:15557:47:1852:-35.339,0,-1267.37 0/0:456:438,18:438:17435:18:714:0,-72.6854,-1503.17 dDocent_Contig_3918 20 . A T 543.815 . AB=0.187919;ABP=129.058;AC=1;AF=0.0833333;AN=12;AO=50;CIGAR=1X;DP=907;DPB=907;DPRA=0.874242;EPP=111.584;EPPR=1861.79;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.964953;PAO=0;PQA=0;PQR=0;PRO=0;QA=2009;QR=34079;RO=856;RPL=0;RPP=111.584;RPPR=1861.79;RPR=50;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=856;SRP=1861.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:149:121,28:121:4853:28:1113:-55.6033,0,-391.808 0/0:115:110,5:110:4350:5:202:0,-16.0564,-372.904 0/0:102:97,5:97:3877:5:205:0,-11.87,-330.097 0/0:211:198,12:198:7866:12:489:0,-18.9786,-663.203 0/0:178:178,0:178:7104:0:0:0,-53.5833,-639.037 0/0:152:152,0:152:6029:0:0:0,-45.7566,-542.406 dDocent_Contig_3919 7 . C T 1782.62 . AB=0.463203;ABP=5.72699;AC=6;AF=0.5;AN=12;AO=107;CIGAR=1X3M1D1M2X;DP=231;DPB=217.5;DPRA=0;EPP=235.358;EPPR=261.416;GTI=0;LEN=1;MEANALT=1.66667;MQM=27;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4125;QR=4643;RO=119;RPL=0;RPP=235.358;RPPR=261.416;RPR=107;RUN=1;SAF=107;SAP=235.358;SAR=0;SRF=119;SRP=261.416;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:42:28,13:28:1102:13:497:-18.7432,0,-86.745 0|1:49:25,22:25:977:22:859:-38.8049,0,-73.8384 0|1:11:6,5:6:231:5:195:-8.98667,0,-17.8454 0|1:42:25,16:25:960:16:624:-26.2891,0,-74.2379 0|1:44:17,26:17:667:26:991:-49.3963,0,-47.1465 0|1:43:18,25:18:706:25:959:-47.2638,0,-50.9281 dDocent_Contig_3920 107 . N A 34.941 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=11;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=90;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:31:-0.897611,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:59:-2.26604,-0.60206,0 dDocent_Contig_3922 13 . C G 2750.62 . AB=0.465517;ABP=5.40641;AC=6;AF=0.5;AN=12;AO=108;CIGAR=1X3M1D1M2X;DP=232;DPB=217.5;DPRA=0;EPP=237.529;EPPR=257.073;GTI=0;LEN=1;MEANALT=1.66667;MQM=54.4259;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.833333;PAIREDR=0.82906;PAO=0;PQA=0;PQR=0;PRO=0;QA=4125;QR=4545;RO=117;RPL=0;RPP=237.529;RPPR=257.073;RPR=108;RUN=1;SAF=108;SAP=237.529;SAR=0;SRF=117;SRP=257.073;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:24:9,0,15:9:353:0,15:0,579:-44.5953,-47.3046,-76.3398,0,-29.423,-24.9076 0|1:40:22,0,18:22:862:0,18:0,679:-40.8177,-47.4403,-118.362,0,-71.2765,-65.8579 0|1:19:13,0,6:13:509:0,6:0,235:-12.5259,-16.4393,-58.3333,0,-42.2445,-40.4383 0|1:70:34,0,34:34:1305:0,34:0,1292:-92.2571,-102.492,-209.615,0,-107.152,-96.9173 0|1:37:17,0,19:17:653:0,19:0,740:-55.713,-60.8305,-114.43,0,-53.6054,-47.8859 0|1:42:22,4,16:22:863:4,16:158,600:-40.3751,-33.9889,-103.778,0,-57.9701,-66.1559 dDocent_Contig_3924 82 . A C 3167.91 . AB=0.320197;ABP=117.018;AC=2;AF=0.166667;AN=12;AO=130;CIGAR=1X;DP=821;DPB=821;DPRA=1.95663;EPP=285.302;EPPR=1503.5;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9349;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995658;PAO=0;PQA=0;PQR=0;PRO=0;QA=4909;QR=25623;RO=691;RPL=130;RPP=285.302;RPPR=1503.5;RPR=0;RUN=1;SAF=130;SAP=285.302;SAR=0;SRF=691;SRP=1503.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:104:104,0:104:3761:0:0:0,-31.3071,-338.113 0/0:134:134,0:134:4817:0:0:0,-40.338,-433.662 0/0:76:76,0:76:2860:0:0:0,-22.8783,-257.482 0/0:101:101,0:101:3789:0:0:0,-30.404,-341.135 0/1:207:119,88:119:4478:88:3331:-237.628,0,-340.774 0/1:199:157,42:157:5918:42:1578:-82.3841,0,-472.699 dDocent_Contig_3925 23 . T C 9109.2 . AB=0.272861;ABP=610.664;AC=3;AF=0.25;AN=12;AO=463;CIGAR=1X;DP=2565;DPB=2565;DPRA=0;EPP=1008.4;EPPR=4556.59;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=59.9967;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997139;PAO=0;PQA=0;PQR=0;PRO=0;QA=18372;QR=78260;RO=2097;RPL=0;RPP=1008.4;RPPR=4556.59;RPR=463;RUN=1;SAF=463;SAP=1008.4;SAR=0;SRF=2097;SRP=4556.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:369:339,30:339:12509:30:1193:0,-3.42953,-1017.69 0/0:483:447,34:447:16535:34:1349:0,-23.3551,-1365.71 0/1:523:461,61:461:17264:61:2438:-62.0466,0,-1395.35 0/0:357:327,29:327:12291:29:1113:0,-6.83314,-1005.22 0/1:459:348,110:348:12986:110:4395:-257.522,0,-1030.2 0/1:374:175,199:175:6675:199:7884:-596.573,0,-488.003 dDocent_Contig_3926 7 . C T 21854.2 . AB=0.0630631;ABP=187.077;AC=0;AF=0;AN=12;AO=7;CIGAR=1X3M1X3M1X;DP=849;DPB=849;DPRA=0.837736;EPP=18.2106;EPPR=265.758;GTI=0;LEN=1;MEANALT=2;MQM=15;MQMR=60;NS=6;NUMALT=3;ODDS=5.55112e-17;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=277;QR=4709;RO=121;RPL=0;RPP=18.2106;RPPR=265.758;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=121;SRP=265.758;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:124:20,0,1,103:20:785:0,1,103:0,40,4106:-332.096,-338.116,-402.676,-334.821,-399.381,-399.08,0,-64.5534,-61.258,-33.5473 0|0:139:24,0,14,101:24:946:0,14,101:0,560,3995:-321.521,-328.745,-406.576,-282.617,-360.448,-356.233,0,-77.8276,-31.6971,-47.4236 0|0:210:32,0,14,155:32:1239:0,14,155:0,548,6084:-490.673,-500.306,-602.081,-455.254,-557.029,-552.814,0,-101.785,-56.729,-55.125 0|0:111:29,7,0,75:29:1115:7,0,75:277,0,2978:-236.64,-238.057,-327.478,-245.37,-329.586,-336.904,0,-84.4327,-91.7206,-69.1434 0|0:126:6,0,3,116:6:237:0,3,116:0,111,4546:-387.405,-389.211,-408.714,-380.133,-399.636,-398.733,-15.3987,-34.9195,-25.8466,0 0|0:139:10,0,0,128:10:387:0,0,128:0,0,5107:-424.307,-427.317,-459.104,-427.317,-459.104,-459.104,-6.76449,-38.5318,-38.5318,0 dDocent_Contig_3927 33 . A G 22980 . AB=0.576362;ABP=69.0061;AC=6;AF=0.5;AN=12;AO=751;CIGAR=1X;DP=1303;DPB=1303;DPRA=0;EPP=1633.79;EPPR=1201.66;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.998668;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=30025;QR=22002;RO=552;RPL=0;RPP=1633.79;RPPR=1201.66;RPR=751;RUN=1;SAF=751;SAP=1633.79;SAR=0;SRF=552;SRP=1201.66;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:305:131,174:131:5195:174:6941:-532.555,0,-375.611 0/1:381:172,209:172:6924:209:8366:-637.754,0,-508.128 0/1:199:66,133:66:2613:133:5320:-418.733,0,-175.391 0/1:285:126,159:126:5001:159:6345:-484.98,0,-364.185 0/1:23:19,4:19:753:4:156:-7.49275,0,-61.1637 0/1:110:38,72:38:1516:72:2897:-227.706,0,-103.567 dDocent_Contig_3928 42 . G T 1156.83 . AB=0.149171;ABP=777.014;AC=2;AF=0.166667;AN=12;AO=157;CIGAR=1X;DP=2070;DPB=2070;DPRA=0.79759;EPP=343.931;EPPR=2074.82;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.985886;PAO=0;PQA=0;PQR=0;PRO=0;QA=5425;QR=75164;RO=1913;RPL=157;RPP=343.931;RPPR=2074.82;RPR=0;RUN=1;SAF=157;SAP=343.931;SAR=0;SRF=1913;SRP=4157.04;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:265:241,24:241:9392:24:834:0,-4.40358,-769.412 0/1:372:333,39:333:13095:39:1369:-11.514,0,-1065.7 0/1:352:283,69:283:11138:69:2368:-107.391,0,-895.767 0/0:347:327,20:327:12914:20:672:0,-43.6712,-1100.61 0/0:415:415,0:415:16326:0:0:0,-124.927,-1468.18 0/0:319:314,5:314:12299:5:182:0,-79.295,-1089.38 dDocent_Contig_3929 98 . N T 64.3255 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=63;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:34:-3.22983,-0.60206,0 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_3930 62 . A C 31068.4 . AB=0.449898;ABP=34.9962;AC=4;AF=0.333333;AN=12;AO=660;CIGAR=1M1D1X12M;DP=1467;DPB=1367.73;DPRA=0;EPP=1436.18;EPPR=591.479;GTI=0;LEN=1;MEANALT=9;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=26261;QR=9659;RO=271;RPL=660;RPP=1436.18;RPPR=591.479;RPR=0;RUN=1;SAF=660;SAP=1436.18;SAR=0;SRF=271;SRP=591.479;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:119:38,7,68,2:38:1362:7,68,2:285,2686,63:-209.603,-197.53,-306.495,0,-87.5757,-90.6247,-215.98,-303.539,-106.032,-326.45 1|0:89:28,27,30,1:28:969:27,30,1:1068,1200,38:-99.6217,-20.1518,-90.7555,-9.18738,0,-78.8904,-104.934,-95.7664,-84.8043,-183.365 1|0:154:26,33,92,1:26:916:33,92,1:1320,3624,38:-324.467,-223.562,-288.194,-34.1986,0,-81.0584,-329.178,-295.011,-105.637,-403.444 0|0:179:52,10,99,8:52:1876:10,99,8:406,3893,316:-304.573,-286.739,-436.826,0,-119.637,-123.329,-294.222,-413.832,-127.122,-444.91 0|1:444:103,255,30,36:103:3661:255,30,36:10110,1209,1405:-801.136,0,-221.559,-732.491,-198.664,-1021.78,-716.657,-182.829,-915.321,-1004.13 1|0:482:24,328,0,119:24:875:328,0,119:13072,0,4635:-1378.66,-309.478,-282.222,-1385.88,-380.96,-1457.36,-1004.97,0,-1076.45,-1040.63 dDocent_Contig_3931 36 . G T 2684.64 . AB=0.298343;ABP=130.875;AC=6;AF=0.5;AN=12;AO=108;CIGAR=1X;DP=362;DPB=362;DPRA=0;EPP=237.529;EPPR=554.564;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9449;NS=6;NUMALT=1;ODDS=0;PAIRED=0.851852;PAIREDR=0.850394;PAO=0;PQA=0;PQR=0;PRO=0;QA=4294;QR=10118;RO=254;RPL=0;RPP=237.529;RPPR=554.564;RPR=108;RUN=1;SAF=108;SAP=237.529;SAR=0;SRF=254;SRP=554.564;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:49,5:49:1965:5:196:-1.75868,0,-160.79 0/1:89:64,25:64:2532:25:986:-62.2401,0,-201.233 0/1:41:27,14:27:1093:14:527:-35.4107,0,-86.2093 0/1:83:63,20:63:2500:20:809:-48.1404,0,-200.158 0/1:33:15,18:15:585:18:729:-56.0009,0,-43.0468 0/1:62:36,26:36:1443:26:1047:-75.8543,0,-111.454 dDocent_Contig_3932 26 . A G 1148.43 . AB=0.217899;ABP=180.657;AC=4;AF=0.333333;AN=12;AO=73;CIGAR=1X;DP=1234;DPB=1234;DPRA=0;EPP=161.528;EPPR=2519.75;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.0136986;PAIREDR=0.886972;PAO=0;PQA=0;PQR=0;PRO=0;QA=2859;QR=45988;RO=1159;RPL=0;RPP=161.528;RPPR=2519.75;RPR=73;RUN=1;SAF=73;SAP=161.528;SAR=0;SRF=1159;SRP=2519.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:33,4:33:1295:4:163:-3.92032,0,-105.67 0/1:30:19,11:19:727:11:436:-30.5624,0,-56.7144 0/1:157:119,37:119:4709:37:1450:-83.3757,0,-376.358 0/1:33:29,4:29:1183:4:153:-4.20486,0,-96.8076 0/0:466:458,8:458:18193:8:293:0,-113.574,-1609.23 0/0:511:501,9:501:19881:9:364:0,-120.809,-1754.57 dDocent_Contig_3933 116 . C T 10803.1 . AB=0.528395;ABP=5.84662;AC=6;AF=0.5;AN=12;AO=419;CIGAR=1X;DP=682;DPB=682;DPRA=0;EPP=912.857;EPPR=571.936;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996183;PAO=0;PQA=0;PQR=0;PRO=0;QA=14099;QR=8927;RO=262;RPL=0;RPP=912.857;RPPR=571.936;RPR=419;RUN=1;SAF=0;SAP=912.857;SAR=419;SRF=0;SRP=571.936;SRR=262;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:59:19,40:19:654:40:1334:-102.589,0,-41.4212 0/1:113:88,25:88:3012:25:837:-41.6233,0,-237.309 0/0:64:58,6:58:1975:6:208:0,-0.206275,-158.966 0/1:67:48,19:48:1632:19:619:-35.8467,0,-126.999 0/1:166:35,130:35:1189:130:4392:-345.702,0,-57.5252 1/1:213:14,199:14:465:199:6709:-561.769,-21.9513,0 dDocent_Contig_3934 106 . N T 10823.7 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=355;CIGAR=2X;DP=355;DPB=355;DPRA=0;EPP=773.883;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=12014;QR=0;RO=0;RPL=0;RPP=773.883;RPPR=0;RPR=355;RUN=1;SAF=0;SAP=773.883;SAR=355;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:10:0,10:0:0:10:327:-29.746,-3.0103,0 .:.:.:.:.:.:.:. 1|1:273:0,273:0:0:273:9233:-831.023,-82.1812,0 1|1:72:0,72:0:0:72:2454:-221.124,-21.6742,0 dDocent_Contig_3936 119 . T A 504.481 . AB=0.160093;ABP=435.536;AC=1;AF=0.0833333;AN=12;AO=115;CIGAR=1X;DP=2079;DPB=2079;DPRA=1.53571;EPP=252.73;EPPR=4256.92;GTI=0;LEN=1;MEANALT=2.5;MQM=40;MQMR=44.5937;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3482;QR=65735;RO=1959;RPL=0;RPP=252.73;RPPR=4256.92;RPR=115;RUN=1;SAF=0;SAP=252.73;SAR=115;SRF=0;SRP=4256.92;SRR=1959;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:186:186,0:186:6168:0:0:0,-55.9916,-541.981 0/0:314:313,0:313:10432:0:0:0,-94.2224,-920.873 0/0:460:459,0:459:15438:0:0:0,-138.173,-1353.14 0/0:216:216,0:216:7294:0:0:0,-65.0225,-642.62 0/0:472:424,46:424:14241:46:1424:0,-15.9672,-1117.08 0/1:431:361,69:361:12162:69:2058:-51.971,0,-937.825 dDocent_Contig_3937 17 . T C 69.2856 . AB=0.119403;ABP=87.3088;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=312;DPB=312;DPRA=1.36735;EPP=20.3821;EPPR=612.051;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.960526;PAO=0;PQA=0;PQR=0;PRO=0;QA=314;QR=12121;RO=304;RPL=0;RPP=20.3821;RPPR=663.138;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=298;SRP=612.051;SRR=6;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1213:0:0:0,-9.0309,-109.441 0/0:73:73,0:73:2904:0:0:0,-21.9752,-261.464 0/0:25:25,0:25:1003:0:0:0,-7.52575,-90.5663 0/1:67:59,8:59:2333:8:314:-8.45144,0,-189.959 0/0:49:49,0:49:1963:0:0:0,-14.7505,-176.868 0/0:68:68,0:68:2705:0:0:0,-20.47,-243.575 dDocent_Contig_3938 51 . C A 1726.2 . AB=0.18835;ABP=437.478;AC=4;AF=0.333333;AN=12;AO=97;CIGAR=1X;DP=797;DPB=797;DPRA=0.913121;EPP=213.643;EPPR=1523.04;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.974286;PAO=0;PQA=0;PQR=0;PRO=0;QA=3707;QR=27169;RO=700;RPL=97;RPP=213.643;RPPR=1523.04;RPR=0;RUN=1;SAF=97;SAP=213.643;SAR=0;SRF=700;SRP=1523.04;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:150:117,33:117:4462:33:1259:-68.4398,0,-356.442 0/1:150:134,16:134:5146:16:616:-10.6207,0,-417.916 0/1:98:61,37:61:2420:37:1411:-97.7578,0,-188.466 0/1:117:106,11:106:4112:11:421:-3.0168,0,-334.88 0/0:166:166,0:166:6455:0:0:0,-49.971,-580.764 0/0:116:116,0:116:4574:0:0:0,-34.9195,-411.623 dDocent_Contig_3939 27 . G A 105.354 . AB=0.206897;ABP=24.6501;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=191;DPB=191;DPRA=1.44144;EPP=20.3821;EPPR=400.39;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.540984;PAO=0;PQA=0;PQR=0;PRO=0;QA=308;QR=7149;RO=183;RPL=0;RPP=20.3821;RPPR=400.39;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=183;SRP=400.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:40,0:40:1575:0:0:0,-12.0412,-141.996 0/0:51:49,2:49:1851:2:81:0,-7.6668,-159.125 0/0:23:23,0:23:906:0:0:0,-6.92369,-81.8447 0/1:29:23,6:23:928:6:227:-12.0583,0,-75.0943 0/0:22:22,0:22:865:0:0:0,-6.62266,-78.16 0/0:26:26,0:26:1024:0:0:0,-7.82678,-92.455 dDocent_Contig_3940 40 . G A 122.823 . AB=0.10396;ABP=278.207;AC=2;AF=0.166667;AN=12;AO=25;CIGAR=1X;DP=673;DPB=673;DPRA=0.693262;EPP=57.2971;EPPR=1407.95;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.981453;PAO=0;PQA=0;PQR=0;PRO=0;QA=999;QR=25598;RO=647;RPL=0;RPP=57.2971;RPPR=1407.95;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=647;SRP=1407.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:79:75,3:75:2979:3:118:0,-12.802,-257.232 0/1:91:81,10:81:3208:10:406:-9.5063,0,-261.401 0/0:110:109,1:109:4257:1:41:0,-29.0187,-379.011 0/1:111:100,11:100:3945:11:434:-5.99785,0,-321.647 0/0:145:145,0:145:5821:0:0:0,-43.6493,-523.682 0/0:137:137,0:137:5388:0:0:0,-41.2411,-484.769 dDocent_Contig_3941 9 . T A 1230.76 . AB=0.27551;ABP=88.8056;AC=3;AF=0.25;AN=12;AO=61;CIGAR=1X;DP=394;DPB=394;DPRA=0.850667;EPP=135.47;EPPR=726.111;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.934426;PAIREDR=0.918919;PAO=0;PQA=0;PQR=0;PRO=0;QA=2340;QR=12775;RO=333;RPL=0;RPP=135.47;RPPR=726.111;RPR=61;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=333;SRP=726.111;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:56:33,23:33:1249:23:878:-62.4817,0,-95.8407 0/0:55:52,3:52:1976:3:116:0,-5.73894,-167.265 0/1:74:53,21:53:2052:21:809:-50.8585,0,-162.635 0/1:66:56,10:56:2138:10:383:-14.9574,0,-172.777 0/0:68:64,4:64:2451:4:154:0,-6.23645,-206.562 0/0:75:75,0:75:2909:0:0:0,-22.5772,-261.975 dDocent_Contig_3942 86 . C T 6392.75 . AB=0.531049;ABP=6.92081;AC=5;AF=0.416667;AN=12;AO=248;CIGAR=1X;DP=506;DPB=506;DPRA=2.39487;EPP=541.535;EPPR=563.25;GTI=0;LEN=1;MEANALT=1;MQM=59.9919;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8752;QR=9074;RO=258;RPL=248;RPP=541.535;RPPR=563.25;RPR=0;RUN=1;SAF=248;SAP=541.535;SAR=0;SRF=258;SRP=563.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:109:21,88:21:726:88:3081:-244.7,0,-32.8464 0/1:82:50,32:50:1742:32:1102:-74.7944,0,-132.377 0/1:36:18,18:18:639:18:642:-47.2707,0,-47.0022 0/1:147:52,95:52:1826:95:3389:-260.973,0,-120.366 0/1:93:78,15:78:2755:15:538:-20.7591,0,-220.198 0/0:39:39,0:39:1386:0:0:0,-11.7402,-125.04 dDocent_Contig_3943 98 . N A 370.675 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=15;CIGAR=1X;DP=16;DPB=16;DPRA=0;EPP=35.5824;EPPR=0;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=392;QR=0;RO=0;RPL=15;RPP=35.5824;RPPR=0;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:81:-7.55744,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 1/1:6:0,6:0:0:6:166:-15.2116,-1.80618,0 1/1:4:0,3:0:0:3:69:-6.32896,-0.90309,0 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 dDocent_Contig_3944 30 . T G 1542.76 . AB=0.141732;ABP=852.552;AC=1;AF=0.0833333;AN=12;AO=212;CIGAR=1X;DP=4465;DPB=4465;DPRA=0.885785;EPP=463.362;EPPR=9236.11;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999294;PAO=0;PQA=0;PQR=0;PRO=0;QA=8432;QR=170789;RO=4252;RPL=0;RPP=463.362;RPPR=9236.11;RPR=212;RUN=1;SAF=212;SAP=463.362;SAR=0;SRF=4252;SRP=9236.11;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:762:654,108:654:26281:108:4277:-155.498,0,-2133.48 0/0:791:753,38:753:30367:38:1502:0,-102.691,-2594.68 0/0:493:486,7:486:19603:7:286:0,-122.293,-1736.41 0/0:808:748,59:748:30001:59:2367:0,-30.1617,-2484.09 0/0:920:920,0:920:36759:0:0:0,-276.948,-3304.85 0/0:691:691,0:691:27778:0:0:0,-208.012,-2497.43 dDocent_Contig_3945 28 . C G 861.548 . AB=0.125206;ABP=743.618;AC=1;AF=0.0833333;AN=12;AO=316;CIGAR=1X;DP=4680;DPB=4680;DPRA=0;EPP=689.196;EPPR=9466.29;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999771;PAO=0;PQA=0;PQR=0;PRO=0;QA=12570;QR=171901;RO=4358;RPL=0;RPP=689.196;RPPR=9466.29;RPR=316;RUN=1;SAF=316;SAP=689.196;SAR=0;SRF=4358;SRP=9466.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:607:531,76:531:21066:76:3000:-87.3766,0,-1711.49 0/0:758:726,30:726:28633:30:1171:0,-122.018,-2468.83 0/0:500:489,10:489:19424:10:400:0,-113.984,-1710.22 0/0:712:672,39:672:26399:39:1562:0,-73.6219,-2232.89 0/0:1109:1018,89:1018:39993:89:3547:0,-14.2373,-3276.58 0/0:994:922,72:922:36386:72:2890:0,-39.0281,-3011.3 dDocent_Contig_3946 10 . T A 192.065 . AB=0.212766;ABP=36.6912;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=170;DPB=170;DPRA=0.764228;EPP=24.725;EPPR=350.446;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=398;QR=6077;RO=160;RPL=0;RPP=24.725;RPPR=350.446;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=160;SRP=350.446;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:461:0:0:0,-3.61236,-41.837 0/0:62:62,0:62:2344:0:0:0,-18.6639,-211.159 0/0:17:17,0:17:659:0:0:0,-5.11751,-59.6448 0/0:32:32,0:32:1209:0:0:0,-9.63296,-109.1 0/1:13:8,5:8:289:5:196:-14.1013,0,-22.4406 0/1:34:29,5:29:1115:5:202:-8.32706,0,-90.4095 dDocent_Contig_3947 13 . A T 29947.9 . AB=0.095648;ABP=2972.54;AC=6;AF=0.5;AN=12;AO=200;CIGAR=1X2M2X;DP=2387;DPB=2387;DPRA=0;EPP=437.305;EPPR=2511.06;GTI=0;LEN=1;MEANALT=2.8;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.999134;PAO=0;PQA=0;PQR=0;PRO=0;QA=7980;QR=45534;RO=1155;RPL=0;RPP=437.305;RPPR=2511.06;RPR=200;RUN=1;SAF=200;SAP=437.305;SAR=0;SRF=1155;SRP=2511.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:352:226,106,19:226:8940:106,19:4213,763:-278.818,0,-703.809,-283.977,-672.845,-1013.98 0|1:551:259,240,52:259:10176:240,52:9521,2048:-705.761,0,-764.707,-615.249,-668.475,-1436.55 0|1:380:172,178,30:172:6754:178,30:7054,1211:-528.807,0,-501.881,-480.752,-455.632,-1027.19 0|1:384:164,159,59:164:6495:159,59:6295,2356:-468.721,0,-486.704,-324.046,-340.524,-840.854 0|1:424:277,106,40:277:10920:106,40:4212,1602:-263.378,0,-866.492,-214.785,-766.423,-1101.15 0|1:296:57,238,0:57:2249:238,0:9445,0:-760.527,0,-113.589,-777.686,-185.235,-962.73 dDocent_Contig_3948 7 . C T 229.908 . AB=0.12381;ABP=261.147;AC=2;AF=0.166667;AN=12;AO=26;CIGAR=1X;DP=791;DPB=791;DPRA=0.722892;EPP=59.4686;EPPR=1664.19;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=986;QR=29390;RO=765;RPL=0;RPP=59.4686;RPPR=1664.19;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=765;SRP=1664.19;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:100:100,0:100:3846:0:0:0,-30.103,-346.237 0/1:133:120,13:120:4607:13:501:-5.40101,0,-374.636 0/1:77:64,13:64:2475:13:485:-20.8116,0,-199.77 0/0:55:55,0:55:2127:0:0:0,-16.5566,-191.656 0/0:211:211,0:211:8096:0:0:0,-63.5173,-728.421 0/0:215:215,0:215:8239:0:0:0,-64.7214,-741.276 dDocent_Contig_3949 9 . G A 67179.7 . AB=0.428449;ABP=261.859;AC=6;AF=0.5;AN=12;AO=2494;CIGAR=1X;DP=5821;DPB=5821;DPRA=0;EPP=5418.66;EPPR=7227.5;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998797;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=94286;QR=126649;RO=3327;RPL=0;RPP=5418.66;RPPR=7227.5;RPR=2494;RUN=1;SAF=2494;SAP=5418.66;SAR=0;SRF=3327;SRP=7227.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:878:494,384:494:18800:384:14512:-1041.16,0,-1426.75 0/1:1052:703,349:703:26810:349:13142:-865.569,0,-2094.69 0/1:628:400,228:400:15101:228:8677:-591.654,0,-1169.38 0/1:929:559,370:559:21337:370:13986:-978.5,0,-1639.53 0/1:1303:600,703:600:22843:703:26596:-1999.92,0,-1662.39 0/1:1031:571,460:571:21758:460:17373:-1252.39,0,-1646.69 dDocent_Contig_3950 20 . C A 234.06 . AB=0.0977597;ABP=693.039;AC=1;AF=0.0833333;AN=12;AO=48;CIGAR=1X;DP=2195;DPB=2195;DPRA=1.44073;EPP=107.241;EPPR=4665.16;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996274;PAO=0;PQA=0;PQR=0;PRO=0;QA=1917;QR=85385;RO=2147;RPL=0;RPP=107.241;RPPR=4665.16;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=2147;SRP=4665.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:316:316,0:316:12542:0:0:0,-95.1255,-1127.92 0/0:378:378,0:378:15099:0:0:0,-113.789,-1357.75 0/0:238:238,0:238:9469:0:0:0,-71.6451,-851.642 0/0:328:328,0:328:13060:0:0:0,-98.7378,-1174.47 0/1:491:443,48:443:17586:48:1917:-24.9289,0,-1433.53 0/0:444:444,0:444:17629:0:0:0,-133.657,-1585.23 dDocent_Contig_3951 24 . G A 276.328 . AB=0.0977218;ABP=2347.58;AC=2;AF=0.166667;AN=12;AO=434;CIGAR=1X;DP=4947;DPB=4947;DPRA=0;EPP=945.429;EPPR=9796.35;GTI=0;LEN=1;MEANALT=1.5;MQM=47.3871;MQMR=59.5831;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0529954;PAIREDR=0.813747;PAO=0;PQA=0;PQR=0;PRO=0;QA=17020;QR=176912;RO=4510;RPL=0;RPP=945.429;RPPR=9796.35;RPR=434;RUN=1;SAF=434;SAP=945.429;SAR=0;SRF=4510;SRP=9796.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:807:733,74:733:28793:74:2938:0,-0.982986,-2331.7 0/0:1152:1046,104:1046:41057:104:4061:0,-22.04,-3336.1 0/0:609:561,48:561:21832:48:1881:0,-25.8915,-1800.59 0/1:923:833,90:833:32659:90:3532:-17.2966,0,-2646.02 0/1:745:671,73:671:26499:73:2890:-13.558,0,-2145.03 0/0:711:666,45:666:26072:45:1718:0,-76.8516,-2200.61 dDocent_Contig_3952 27 . C T 18553.8 . AB=0.559383;ABP=36.7951;AC=6;AF=0.5;AN=12;AO=617;CIGAR=1X;DP=1103;DPB=1103;DPRA=0;EPP=1342.81;EPPR=1058.35;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998379;PAIREDR=0.893004;PAO=0;PQA=0;PQR=0;PRO=0;QA=24430;QR=19485;RO=486;RPL=0;RPP=1342.81;RPPR=1058.35;RPR=617;RUN=1;SAF=617;SAP=1342.81;SAR=0;SRF=486;SRP=1058.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:145:58,87:58:2322:87:3425:-264.657,0,-165.485 0/1:245:69,176:69:2784:176:7013:-557.093,0,-176.909 0/1:102:18,84:18:712:84:3325:-268.615,0,-33.6995 0/1:199:53,146:53:2128:146:5773:-459.484,0,-131.792 0/1:170:115,55:115:4605:55:2168:-144.136,0,-363.176 0/1:242:173,69:173:6934:69:2726:-172.616,0,-550.882 dDocent_Contig_3953 14 . T C 315.339 . AB=0.122363;ABP=296.581;AC=1;AF=0.0833333;AN=12;AO=29;CIGAR=1X;DP=718;DPB=718;DPRA=2.46362;EPP=65.983;EPPR=1496.98;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.976744;PAO=0;PQA=0;PQR=0;PRO=0;QA=1157;QR=27515;RO=688;RPL=0;RPP=65.983;RPPR=1496.98;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=688;SRP=1496.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:94:94,0:94:3739:0:0:0,-28.2968,-336.522 0/0:54:54,0:54:2159:0:0:0,-16.2556,-194.484 0/0:71:70,0:70:2805:0:0:0,-21.0721,-252.146 0/0:23:23,0:23:923:0:0:0,-6.92369,-83.3747 0/1:237:208,29:208:8350:29:1157:-33.0568,0,-679.675 0/0:239:239,0:239:9539:0:0:0,-71.9462,-857.919 dDocent_Contig_3954 17 . A G 944.486 . AB=0.21028;ABP=159.032;AC=3;AF=0.25;AN=12;AO=51;CIGAR=1X;DP=405;DPB=405;DPRA=0.60198;EPP=113.755;EPPR=771.712;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.991525;PAO=0;PQA=0;PQR=0;PRO=0;QA=2052;QR=14095;RO=354;RPL=0;RPP=113.755;RPPR=771.712;RPR=51;RUN=1;SAF=51;SAP=113.755;SAR=0;SRF=354;SRP=771.712;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:101:101,0:101:3958:0:0:0,-30.404,-356.218 0/0:58:54,4:54:2164:4:164:0,-2.30984,-179.782 0/1:30:25,5:25:1001:5:205:-9.80411,0,-81.3589 0/0:32:30,2:30:1215:2:76:0,-2.4187,-102.407 0/1:70:56,14:56:2267:14:559:-29.5774,0,-183.115 0/1:114:88,26:88:3490:26:1048:-60.289,0,-279.831 dDocent_Contig_3956 13 . C T 287.387 . AB=0.10387;ABP=672.235;AC=1;AF=0.0833333;AN=12;AO=102;CIGAR=1X;DP=3020;DPB=3020;DPRA=0.922677;EPP=224.5;EPPR=6335.02;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3939;QR=113187;RO=2916;RPL=0;RPP=224.5;RPPR=6335.02;RPR=102;RUN=1;SAF=102;SAP=224.5;SAR=0;SRF=2916;SRP=6335.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:509:501,8:501:19430:8:318:0,-124.237,-1718.51 0/0:538:537,0:537:20790:0:0:0,-161.653,-1869.69 0/0:495:493,1:493:19163:1:40:0,-145.118,-1719.43 0/0:490:488,2:488:18952:2:75:0,-140.384,-1697.38 0/1:491:440,51:440:17063:51:1976:-30.2616,0,-1386.86 0/0:497:457,40:457:17789:40:1530:0,-11.6444,-1461.95 dDocent_Contig_3957 46 . G A 99256.9 . AB=0.637733;ABP=834.461;AC=6;AF=0.5;AN=12;AO=3218;CIGAR=1X;DP=5046;DPB=5046;DPRA=0;EPP=6990.81;EPPR=3968.12;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999378;PAIREDR=0.999452;PAO=0;PQA=0;PQR=0;PRO=0;QA=127403;QR=72211;RO=1826;RPL=0;RPP=6990.81;RPPR=3968.12;RPR=3218;RUN=1;SAF=3218;SAP=6990.81;SAR=0;SRF=1826;SRP=3968.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:683:262,421:262:10363:421:16502:-1278.33,0,-726.411 0/1:831:259,572:259:10308:572:22692:-1790.24,0,-676.894 0/1:466:165,301:165:6478:301:11987:-937.728,0,-442.489 0/1:813:153,660:153:6096:660:26190:-2110.11,0,-303.665 0/1:1094:464,629:464:18423:629:24911:-1910.75,0,-1327.46 0/1:1159:523,635:523:20543:635:25121:-1909.75,0,-1498.2 dDocent_Contig_3958 7 . C T 401.693 . AB=0.212121;ABP=74.2741;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=1X;DP=929;DPB=929;DPRA=0.451187;EPP=57.2971;EPPR=1955.16;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.968854;PAO=0;PQA=0;PQR=0;PRO=0;QA=936;QR=34420;RO=899;RPL=0;RPP=57.2971;RPPR=1955.16;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=899;SRP=1955.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:197:197,0:197:7549:0:0:0,-59.3029,-679.247 0/0:239:239,0:239:9128:0:0:0,-71.9462,-821.239 0/0:152:151,0:151:5800:0:0:0,-45.4555,-521.571 0/0:170:170,0:170:6526:0:0:0,-51.1751,-587.243 0/0:72:68,4:68:2626:4:155:0,-7.34872,-222.204 0/1:99:74,21:74:2791:21:781:-41.6922,0,-222.454 dDocent_Contig_3959 107 . N A 243.561 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=10;CIGAR=1X4M;DP=13;DPB=13;DPRA=1.375;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=0;NS=5;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=238;QR=0;RO=0;RPL=0;RPP=24.725;RPPR=0;RPR=10;RUN=1;SAF=0;SAP=24.725;SAR=10;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:3:0,0,3:0:0:0,3:0,74:-6.90499,-6.90499,-6.90499,-0.90309,-0.90309,0 1|1:2:0,0,2:0:0:0,2:0,61:-5.79353,-5.79353,-5.79353,-0.60206,-0.60206,0 1|1:2:0,0,2:0:0:0,2:0,18:-1.70999,-1.70999,-1.70999,-0.60206,-0.60206,0 1|1:2:0,2,0:0:0:2,0:15,0:-1.425,-0.60206,0,-1.425,-0.60206,-1.425 1|1:4:0,0,3:0:0:0,3:0,85:-7.80888,-7.80888,-7.80888,-0.90309,-0.90309,0 .:.:.:.:.:.:.:. dDocent_Contig_3960 28 . C A 41699.3 . AB=0.363057;ABP=693.497;AC=6;AF=0.5;AN=12;AO=1539;CIGAR=1X;DP=4239;DPB=4239;DPRA=0;EPP=3344.91;EPPR=5850.79;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=60663;QR=106240;RO=2693;RPL=0;RPP=3344.91;RPPR=5850.79;RPR=1539;RUN=1;SAF=1539;SAP=3344.91;SAR=0;SRF=2693;SRP=5850.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:632:404,228:404:15825:228:8932:-613.145,0,-1232.84 0/1:730:474,256:474:18671:256:10043:-683.561,0,-1459.15 0/1:754:319,433:319:12613:433:17169:-1317.19,0,-907.572 0/1:625:364,259:364:14405:259:10169:-726.768,0,-1107.54 0/1:759:624,135:624:24676:135:5342:-252.174,0,-1990.29 0/1:739:508,228:508:20050:228:9008:-588.313,0,-1580.93 dDocent_Contig_3961 10 . T A 41.9698 . AB=0.111111;ABP=73.9451;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=275;DPB=275;DPRA=0.923077;EPP=24.725;EPPR=578.45;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.89434;PAO=0;PQA=0;PQR=0;PRO=0;QA=396;QR=10350;RO=265;RPL=0;RPP=24.725;RPPR=578.45;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=265;SRP=578.45;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1605:0:0:0,-12.3422,-144.694 0/0:47:44,3:44:1727:3:118:0,-3.1459,-144.666 0/0:57:57,0:57:2215:0:0:0,-17.1587,-199.538 0/0:31:30,1:30:1158:1:38:0,-5.53466,-100.702 0/1:54:48,6:48:1888:6:240:-5.71983,0,-153.877 0/0:45:45,0:45:1757:0:0:0,-13.5463,-158.367 dDocent_Contig_3962 66 . A T 1705.86 . AB=0.110701;ABP=359.749;AC=1;AF=0.0833333;AN=12;AO=30;CIGAR=2X;DP=490;DPB=490;DPRA=1.2723;EPP=68.1545;EPPR=817.312;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.8;PAIREDR=0.765333;PAO=0;PQA=0;PQR=0;PRO=0;QA=1005;QR=12645;RO=375;RPL=14;RPP=3.29983;RPPR=3.47934;RPR=16;RUN=1;SAF=14;SAP=3.29983;SAR=16;SRF=192;SRP=3.47934;SRR=183;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:77:46,0,2,29:46:1560:0,2,29:0,70,981:-65.6704,-79.5177,-206.023,-73.8215,-200.328,-199.726,0,-126.495,-120.799,-117.765 0|0:112:90,5,0,17:90:3069:5,0,17:171,0,572:-19.2483,-32.4601,-279.981,-46.341,-281.486,-295.366,0,-235.141,-249.021,-243.904 0|0:43:41,0,0,2:41:1388:0,0,2:0,0,70:0,-12.3422,-124.865,-12.3422,-124.865,-124.865,-6.29689,-119.169,-119.169,-118.567 0|0:87:52,5,5,25:52:1771:5,5,25:171,145,857:-53.942,-55.7147,-197.896,-58.0627,-187.864,-200.239,0,-129.823,-132.167,-136.177 0|0:99:97,0,0,2:97:3216:0,0,2:0,0,70:0,-29.1999,-289.325,-29.1999,-289.325,-289.325,-23.1546,-283.629,-283.629,-283.027 0|1:72:49,20,0,3:49:1641:20,0,3:663,0,76:-38.9471,0,-126.946,-53.6976,-132.966,-186.596,-47.7731,-127.036,-180.665,-179.762 dDocent_Contig_3963 18 . C G 3007.56 . AB=0.325967;ABP=98.2432;AC=6;AF=0.5;AN=12;AO=118;CIGAR=1X;DP=362;DPB=362;DPRA=0;EPP=259.244;EPPR=530.678;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.932203;PAIREDR=0.888889;PAO=0;PQA=0;PQR=0;PRO=0;QA=4655;QR=9804;RO=243;RPL=0;RPP=259.244;RPPR=530.678;RPR=118;RUN=1;SAF=118;SAP=259.244;SAR=0;SRF=243;SRP=530.678;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:48:41,7:41:1656:7:284:-11.4843,0,-134.81 0/1:92:65,26:65:2627:26:1024:-64.8643,0,-208.957 0/1:55:43,12:43:1734:12:478:-26.8111,0,-139.721 0/1:59:50,9:50:2015:9:362:-15.1834,0,-163.775 0/1:59:18,41:18:729:41:1636:-129.701,0,-48.174 0/1:49:26,23:26:1043:23:871:-63.9333,0,-79.4058 dDocent_Contig_3964 98 . N A 103.54 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=104;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 dDocent_Contig_3965 31 . A T 85.5512 . AB=0.091314;ABP=654.399;AC=1;AF=0.0833333;AN=12;AO=103;CIGAR=1X;DP=2659;DPB=2659;DPRA=0.790317;EPP=226.672;EPPR=5551.12;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996869;PAO=0;PQA=0;PQR=0;PRO=0;QA=3978;QR=99649;RO=2555;RPL=0;RPP=226.672;RPPR=5551.12;RPR=103;RUN=1;SAF=103;SAP=226.672;SAR=0;SRF=2555;SRP=5551.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:379:372,7:372:14485:7:236:0,-92.53,-1281.12 0/1:449:408,41:408:16044:41:1611:-10.078,0,-1307.67 0/0:271:264,7:264:10254:7:275:0,-56.4599,-897.197 0/0:495:469,26:469:18365:26:1014:0,-57.4448,-1559.93 0/0:528:506,22:506:19806:22:842:0,-82.8467,-1704.96 0/0:537:536,0:536:20695:0:0:0,-161.352,-1860.65 dDocent_Contig_3966 97 . C A 317.43 . AB=0.130435;ABP=521.426;AC=2;AF=0.166667;AN=12;AO=87;CIGAR=1X;DP=1249;DPB=1249;DPRA=0.711679;EPP=191.928;EPPR=2491.52;GTI=0;LEN=1;MEANALT=1.6;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2752;QR=35388;RO=1146;RPL=87;RPP=191.928;RPPR=2491.52;RPR=0;RUN=1;SAF=87;SAP=191.928;SAR=0;SRF=1146;SRP=2491.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:143:129,14:129:3941:14:444:0,-2.77982,-314.652 0/1:195:157,30:157:4826:30:970:-30.9916,0,-377.944 0/1:242:209,27:209:6606:27:834:-3.9725,0,-523.325 0/0:140:133,7:133:4024:7:225:0,-21.5779,-341.817 0/0:274:273,0:273:8393:0:0:0,-82.1812,-755.434 0/0:255:245,9:245:7598:9:279:0,-51.1331,-658.584 dDocent_Contig_3967 75 . C A 148.132 . AB=0.122807;ABP=143.889;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=705;DPB=705;DPRA=0.87169;EPP=46.4397;EPPR=1490.47;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.932847;PAO=0;PQA=0;PQR=0;PRO=0;QA=800;QR=27091;RO=685;RPL=20;RPP=46.4397;RPPR=1490.47;RPR=0;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=685;SRP=1490.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:120:120,0:120:4707:0:0:0,-36.1236,-423.559 0/0:144:144,0:144:5698:0:0:0,-43.3483,-512.649 0/0:88:88,0:88:3459:0:0:0,-26.4906,-311.363 0/0:139:139,0:139:5557:0:0:0,-41.8432,-499.951 0/1:114:100,14:100:3944:14:559:-16.3361,0,-320.638 0/0:100:94,6:94:3726:6:241:0,-8.03691,-313.297 dDocent_Contig_3968 9 . G A 1423.55 . AB=0.27234;ABP=108.803;AC=1;AF=0.0833333;AN=12;AO=108;CIGAR=1X;DP=1373;DPB=1373;DPRA=1.67247;EPP=237.529;EPPR=2747.75;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.927215;PAO=0;PQA=0;PQR=0;PRO=0;QA=4049;QR=48248;RO=1264;RPL=0;RPP=237.529;RPPR=2747.75;RPR=108;RUN=1;SAF=108;SAP=237.529;SAR=0;SRF=1264;SRP=2747.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:261:242,19:242:9241:19:728:0,-12.7175,-765.558 0/0:267:266,1:266:10157:1:39:0,-76.4784,-909.892 0/0:294:270,24:270:10355:24:899:0,-7.27699,-850.349 0/1:235:170,64:170:6466:64:2383:-143.878,0,-511.052 0/0:96:96,0:96:3663:0:0:0,-28.8989,-329.79 0/0:220:220,0:220:8366:0:0:0,-66.2266,-752.728 dDocent_Contig_3969 14 . A T 1821.64 . AB=0.237852;ABP=236.402;AC=4;AF=0.333333;AN=12;AO=102;CIGAR=1X;DP=551;DPB=551;DPRA=0;EPP=224.5;EPPR=978.001;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.892157;PAIREDR=0.870824;PAO=0;PQA=0;PQR=0;PRO=0;QA=3729;QR=17662;RO=449;RPL=0;RPP=224.5;RPPR=978.001;RPR=102;RUN=1;SAF=102;SAP=224.5;SAR=0;SRF=449;SRP=978.001;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:88:75,13:75:2907:13:469:-16.0541,0,-235.252 0/1:135:99,36:99:3930:36:1287:-75.4808,0,-313.074 0/1:80:58,22:58:2274:22:822:-50.2185,0,-180.749 0/1:88:66,22:66:2618:22:820:-47.6326,0,-209.272 0/0:77:71,6:71:2786:6:224:0,-2.65986,-230.35 0/0:83:80,3:80:3147:3:107:0,-15.0044,-273.34 dDocent_Contig_3970 20 . T A 423.303 . AB=0.140187;ABP=243.658;AC=1;AF=0.0833333;AN=12;AO=53;CIGAR=1X;DP=1529;DPB=1529;DPRA=1.00131;EPP=118.098;EPPR=3208.1;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2100;QR=59147;RO=1476;RPL=0;RPP=118.098;RPPR=3208.1;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=1476;SRP=3208.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:197:197,0:197:7878:0:0:0,-59.3029,-708.584 0/0:379:379,0:379:15220:0:0:0,-114.09,-1368.57 0/0:189:186,3:186:7471:3:123:0,-45.4299,-660.529 0/0:362:342,20:342:13701:20:777:0,-38.7302,-1161.79 0/1:214:184,30:184:7369:30:1200:-43.8532,0,-598.401 0/0:188:188,0:188:7508:0:0:0,-56.5936,-675.318 dDocent_Contig_3971 98 . N A 102.486 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=98;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:25:-2.49986,-0.30103,0 1/1:1:0,1:0:0:1:11:-1.09999,-0.30103,0 1/1:2:0,2:0:0:2:55:-5.22446,-0.60206,0 dDocent_Contig_3972 69 . T A 127.882 . AB=0.135802;ABP=96.33;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=373;DPB=373;DPRA=1.21552;EPP=29.068;EPPR=786.912;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.916667;PAIREDR=0.481994;PAO=0;PQA=0;PQR=0;PRO=0;QA=465;QR=13661;RO=361;RPL=7;RPP=3.73412;RPPR=57.2971;RPR=5;RUN=1;SAF=7;SAP=3.73412;SAR=5;SRF=228;SRP=57.2971;SRR=133;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:48,0:48:1809:0:0:0,-14.4494,-163.062 0/0:81:81,0:81:3060:0:0:0,-24.3834,-275.57 0/0:42:42,0:42:1600:0:0:0,-12.6433,-144.262 0/0:61:61,0:61:2312:0:0:0,-18.3628,-208.301 0/0:60:59,1:59:2246:1:39:0,-14.1652,-198.461 0/1:81:70,11:70:2634:11:426:-14.311,0,-212.864 dDocent_Contig_3974 98 . N T 334.616 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=13;CIGAR=1X;DP=14;DPB=14;DPRA=0;EPP=31.2394;EPPR=0;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=2.1684e-19;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=350;QR=0;RO=0;RPL=13;RPP=31.2394;RPPR=0;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:27:-2.69978,-0.30103,0 1/1:3:0,2:0:0:2:64:-5.90525,-0.60206,0 1/1:6:0,6:0:0:6:133:-12.1892,-1.80618,0 1/1:2:0,2:0:0:2:57:-5.41438,-0.60206,0 dDocent_Contig_3975 61 . A C 315.9 . AB=0.15528;ABP=169.189;AC=1;AF=0.0833333;AN=12;AO=35;CIGAR=1X;DP=650;DPB=650;DPRA=2.51351;EPP=79.0118;EPPR=1334.12;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.857143;PAIREDR=0.985318;PAO=0;PQA=0;PQR=0;PRO=0;QA=1271;QR=23014;RO=613;RPL=35;RPP=79.0118;RPPR=1334.12;RPR=0;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=613;SRP=1334.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:77:77,0:77:2892:0:0:0,-23.1793,-260.455 0/0:99:97,1:97:3622:1:24:0,-27.4159,-323.645 0/0:40:40,0:40:1577:0:0:0,-12.0412,-142.165 0/0:68:68,0:68:2565:0:0:0,-20.47,-231.05 0/1:161:136,25:136:5082:25:903:-33.1129,0,-408.952 0/0:205:195,9:195:7276:9:344:0,-30.454,-623.411 dDocent_Contig_3976 98 . N G 106.925 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=105;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:43:-4.08336,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:44:-4.17836,-0.60206,0 1/1:1:0,1:0:0:1:8:-0.799998,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:10:-0.999996,-0.30103,0 dDocent_Contig_3977 98 . N T 39.8982 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0.5;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=42;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:42:-3.9887,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_3978 9 . G A 24454.3 . AB=0.264302;ABP=1934.59;AC=6;AF=0.5;AN=12;AO=1058;CIGAR=1X2M;DP=4003;DPB=4003;DPRA=0;EPP=2300.43;EPPR=6161.31;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=40349;QR=110387;RO=2836;RPL=0;RPP=2300.43;RPPR=6161.31;RPR=1058;RUN=1;SAF=1058;SAP=2300.43;SAR=0;SRF=2836;SRP=6161.31;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:681:498,38,145:498:19409:38,145:1473,5539:-304.545,-333.447,-1917.26,0,-1474.24,-1551.6 0|1:682:538,22,119:538:20870:22,119:866,4508:-207.624,-298.333,-2006.32,0,-1643.36,-1678.78 0|1:471:304,31,134:304:11876:31,134:1200,5126:-329.111,-322.053,-1289.03,0,-877.739,-935.971 0|1:431:351,10,70:351:13697:10,70:391,2668:-113.19,-186.704,-1309.59,0,-1093.74,-1104.81 0|1:966:703,0,263:703:27333:0,263:0,10075:-615.61,-827.234,-3073.27,0,-2246.42,-2167.25 0|1:772:442,0,327:442:17202:0,327:0,12433:-886.577,-1019.63,-2433.31,0,-1413.67,-1315.24 dDocent_Contig_3979 38 . T G 817.371 . AB=0.310345;ABP=39.2514;AC=4;AF=0.333333;AN=12;AO=39;CIGAR=1X;DP=168;DPB=168;DPRA=3.53333;EPP=3.06598;EPPR=274.512;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.589744;PAIREDR=0.689922;PAO=0;PQA=0;PQR=0;PRO=0;QA=1459;QR=5164;RO=129;RPL=0;RPP=87.6977;RPPR=283.13;RPR=39;RUN=1;SAF=19;SAP=3.06598;SAR=20;SRF=128;SRP=274.512;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:31,3:31:1239:3:121:-1.04497,0,-101.54 0/1:29:20,9:20:789:9:320:-20.4075,0,-62.5971 0/0:9:9,0:9:364:0:0:0,-2.70927,-33.1244 0/0:43:40,3:40:1598:3:109:0,-2.77856,-133.886 0/1:24:11,13:11:443:13:486:-36.8533,0,-33.0001 0/1:29:18,11:18:731:11:423:-29.6903,0,-57.3842 dDocent_Contig_3980 42 . C T 2584.38 . AB=0.236938;ABP=497.697;AC=5;AF=0.416667;AN=12;AO=215;CIGAR=1X;DP=1190;DPB=1190;DPRA=0;EPP=469.877;EPPR=2120.2;GTI=0;LEN=1;MEANALT=1;MQM=59.814;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.539535;PAIREDR=0.765128;PAO=0;PQA=0;PQR=0;PRO=0;QA=6290;QR=38190;RO=975;RPL=0;RPP=469.877;RPPR=2120.2;RPR=215;RUN=1;SAF=215;SAP=469.877;SAR=0;SRF=975;SRP=2120.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:120:90,30:90:3539:30:868:-42.2691,0,-282.428 0/1:117:72,45:72:2852:45:1279:-80.1472,0,-221.572 0/1:110:84,26:84:3243:26:771:-36.5522,0,-258.823 0/1:125:90,35:90:3433:35:1001:-52.7259,0,-271.411 0/0:367:347,20:347:13621:20:560:0,-59.8096,-1174.28 0/1:351:292,59:292:11502:59:1811:-55.9655,0,-928.774 dDocent_Contig_3981 29 . G A 37014.7 . AB=0.285742;ABP=2061.3;AC=6;AF=0.5;AN=12;AO=1475;CIGAR=1X;DP=5162;DPB=5162;DPRA=0;EPP=3205.93;EPPR=8000.54;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=0.998644;PAIREDR=0.999185;PAO=0;PQA=0;PQR=0;PRO=0;QA=58555;QR=145553;RO=3683;RPL=0;RPP=3205.93;RPPR=8000.54;RPR=1475;RUN=1;SAF=1475;SAP=3205.93;SAR=0;SRF=3683;SRP=8000.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:740:557,182:557:21933:182:7230:-427.506,0,-1749.33 0/1:966:728,238:728:28868:238:9421:-556.536,0,-2304.79 0/1:480:314,165:314:12420:165:6564:-446.183,0,-972.649 0/1:829:582,247:582:22851:247:9798:-631.643,0,-1805.2 0/1:1033:736,297:736:29219:297:11807:-750.857,0,-2316.15 0/1:1114:766,346:766:30262:346:13735:-899.969,0,-2385.77 dDocent_Contig_3982 143 . N G 70.2696 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=74;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:74:-7.02588,-0.60206,0 dDocent_Contig_3983 12 . T C 125.208 . AB=0.142857;ABP=111.584;AC=1;AF=0.0833333;AN=12;AO=34;CIGAR=1X;DP=514;DPB=514;DPRA=0;EPP=4.03217;EPPR=1043.15;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.529412;PAIREDR=0.951983;PAO=0;PQA=0;PQR=0;PRO=0;QA=1235;QR=18939;RO=479;RPL=0;RPP=76.8404;RPPR=1043.15;RPR=34;RUN=1;SAF=19;SAP=4.03217;SAR=15;SRF=479;SRP=1043.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:98:84,14:84:3256:14:477:-13.7426,0,-263.626 0/0:137:130,6:130:5166:6:242:0,-19.1575,-442.661 0/0:71:69,2:69:2755:2:77:0,-14.0643,-240.758 0/0:57:52,5:52:2020:5:165:0,-1.98464,-166.826 0/0:81:76,5:76:3031:5:193:0,-6.64495,-255.139 0/0:70:68,2:68:2711:2:81:0,-13.3864,-236.422 dDocent_Contig_3984 49 . G T 168.33 . AB=0.128205;ABP=190.314;AC=2;AF=0.166667;AN=12;AO=28;CIGAR=1X;DP=528;DPB=528;DPRA=1.29592;EPP=63.8115;EPPR=1080.08;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.928571;PAIREDR=0.972;PAO=0;PQA=0;PQR=0;PRO=0;QA=1038;QR=19317;RO=500;RPL=0;RPP=63.8115;RPPR=1080.08;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=500;SRP=1088.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:72:63,9:63:2422:9:320:-7.46314,0,-196.48 0/0:104:101,3:101:3936:3:115:0,-20.5824,-343.548 0/0:54:54,0:54:2101:0:0:0,-16.2556,-189.3 0/0:121:116,5:116:4471:5:186:0,-19.3249,-385.285 0/1:84:73,11:73:2831:11:417:-12.5917,0,-229.631 0/0:93:93,0:93:3556:0:0:0,-27.9958,-320.108 dDocent_Contig_3985 10 . G A 873.107 . AB=0.149606;ABP=409.315;AC=2;AF=0.166667;AN=12;AO=57;CIGAR=1X;DP=809;DPB=809;DPRA=1.78037;EPP=126.784;EPPR=1635.96;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99867;PAO=0;PQA=0;PQR=0;PRO=0;QA=2274;QR=29598;RO=752;RPL=0;RPP=126.784;RPPR=1635.96;RPR=57;RUN=1;SAF=57;SAP=126.784;SAR=0;SRF=752;SRP=1635.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:95:95,0:95:3764:0:0:0,-28.5978,-338.778 0/0:139:139,0:139:5464:0:0:0,-41.8432,-491.625 0/0:109:109,0:109:4246:0:0:0,-32.8123,-382.134 0/0:85:85,0:85:3320:0:0:0,-25.5875,-298.871 0/1:190:159,31:159:6280:31:1246:-55.2134,0,-507.785 0/1:191:165,26:165:6524:26:1028:-35.3192,0,-529.417 dDocent_Contig_3986 42 . C T 438.926 . AB=0.28;ABP=34.5401;AC=1;AF=0.0833333;AN=12;AO=24;CIGAR=1X;DP=288;DPB=288;DPRA=1.49091;EPP=55.1256;EPPR=576.279;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.708333;PAIREDR=0.594697;PAO=0;PQA=0;PQR=0;PRO=0;QA=870;QR=10466;RO=264;RPL=0;RPP=55.1256;RPPR=576.279;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=264;SRP=576.279;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:37,0:37:1461:0:0:0,-11.1381,-131.734 0/0:58:58,0:58:2298:0:0:0,-17.4597,-206.97 0/0:33:33,0:33:1308:0:0:0,-9.93399,-117.979 0/0:37:37,0:37:1463:0:0:0,-11.1381,-131.908 0/1:75:54,21:54:2158:21:752:-45.4155,0,-171.817 0/0:48:45,3:45:1778:3:118:0,-3.44672,-149.225 dDocent_Contig_3987 186 . G A 318.181 . AB=0.114035;ABP=445.534;AC=3;AF=0.25;AN=12;AO=41;CIGAR=1X;DP=806;DPB=806;DPRA=0.641643;EPP=92.0407;EPPR=1664.19;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998693;PAO=0;PQA=0;PQR=0;PRO=0;QA=1621;QR=30405;RO=765;RPL=41;RPP=92.0407;RPPR=1664.19;RPR=0;RUN=1;SAF=0;SAP=92.0407;SAR=41;SRF=0;SRP=1664.19;SRR=765;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:118:104,14:104:4143:14:543:-13.6868,0,-337.309 0/0:111:109,2:109:4360:2:77:0,-26.1061,-385.031 0/1:116:101,15:101:4043:15:601:-19.5056,0,-328.929 0/1:108:98,10:98:3912:10:400:-3.84649,0,-319.56 0/0:170:170,0:170:6715:0:0:0,-51.1751,-604.066 0/0:183:183,0:183:7232:0:0:0,-55.0885,-650.528 dDocent_Contig_3988 98 . N A 257.306 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=10;CIGAR=1X;DP=10;DPB=10;DPRA=0;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=267;QR=0;RO=0;RPL=10;RPP=24.725;RPPR=0;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:59:-5.60384,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:65:-6.06586,-0.90309,0 1/1:3:0,3:0:0:3:74:-6.90538,-0.90309,0 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 dDocent_Contig_3989 98 . N C 189.91 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=189;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:65:-6.17345,-0.60206,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:56:-5.31935,-0.60206,0 dDocent_Contig_3991 9 . G A 561.513 . AB=0.13012;ABP=496.165;AC=2;AF=0.166667;AN=12;AO=83;CIGAR=1X;DP=1256;DPB=1256;DPRA=0;EPP=183.243;EPPR=2550.15;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.831325;PAIREDR=0.886616;PAO=0;PQA=0;PQR=0;PRO=0;QA=3148;QR=44551;RO=1173;RPL=0;RPP=183.243;RPPR=2550.15;RPR=83;RUN=1;SAF=83;SAP=183.243;SAR=0;SRF=1173;SRP=2550.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:249:244,5:244:9251:5:186:0,-57.8561,-815.217 0/0:272:264,8:264:9958:8:307:0,-53.889,-867.923 0/0:130:128,2:128:4882:2:77:0,-31.8248,-432.102 0/1:184:156,28:156:5937:28:1058:-40.1316,0,-478.901 0/1:231:205,26:205:7834:26:983:-19.2415,0,-635.34 0/0:190:176,14:176:6689:14:537:0,-8.52095,-553.239 dDocent_Contig_3992 98 . N T 119.515 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=116;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 1/1:2:0,2:0:0:2:50:-4.74974,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_3994 9 . G A 1630.53 . AB=0.126374;ABP=1547.76;AC=2;AF=0.166667;AN=12;AO=287;CIGAR=1X;DP=4920;DPB=4920;DPRA=0;EPP=626.223;EPPR=10063.4;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.996516;PAIREDR=0.999568;PAO=0;PQA=0;PQR=0;PRO=0;QA=10889;QR=176403;RO=4633;RPL=0;RPP=626.223;RPPR=10063.4;RPR=287;RUN=1;SAF=287;SAP=626.223;SAR=0;SRF=4633;SRP=10063.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:719:699,20:699:26619:20:755:0,-148.164,-2325.91 0/1:801:703,98:703:26706:98:3706:-92.5399,0,-2160.9 0/1:473:410,63:410:15636:63:2399:-73.7349,0,-1264.13 0/0:858:793,65:793:30184:65:2474:0,-35.4212,-2491.95 0/0:1088:1052,36:1052:40053:36:1362:0,-204.656,-3479.44 0/0:981:976,5:976:37205:5:193:0,-277.569,-3328.43 dDocent_Contig_3995 24 . T G 150.936 . AB=0.191489;ABP=41.8658;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=295;DPB=295;DPRA=0.935323;EPP=24.725;EPPR=621.88;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8386;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.859649;PAO=0;PQA=0;PQR=0;PRO=0;QA=379;QR=11129;RO=285;RPL=0;RPP=24.725;RPPR=621.88;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=285;SRP=621.88;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:55:55,0:55:2124:0:0:0,-16.5566,-191.343 0/0:52:52,0:52:1988:0:0:0,-15.6536,-179.121 0/0:47:47,0:47:1856:0:0:0,-14.1484,-167.253 0/0:47:47,0:47:1858:0:0:0,-14.1484,-166.449 0/0:47:46,1:46:1820:1:41:0,-10.0538,-159.921 0/1:47:38,9:38:1483:9:338:-16.6165,0,-119.566 dDocent_Contig_3996 15 . C A 2984.59 . AB=0.0261324;ABP=5600.72;AC=0;AF=0;AN=12;AO=75;CIGAR=1X2M1X;DP=2870;DPB=2870;DPRA=0;EPP=165.871;EPPR=5069.06;GTI=0;LEN=1;MEANALT=6.33333;MQM=60;MQMR=59.9807;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.997;PAO=0;PQA=0;PQR=0;PRO=0;QA=2915;QR=91566;RO=2333;RPL=0;RPP=165.871;RPPR=5069.06;RPR=75;RUN=1;SAF=75;SAP=165.871;SAR=0;SRF=2333;SRP=5069.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:380:317,8,45:317:12407:8,45:310,1722:-45.8738,-115.834,-1133.01,0,-994.115,-1006.03 0|0:530:434,28,51:434:17089:28,51:1096,1932:-27.7318,-68.2575,-1465.62,0,-1315.66,-1390.43 0|0:409:323,14,51:323:12664:14,51:532,1932:-61.1552,-114.763,-1151.92,0,-997.752,-1026.02 0|0:461:398,4,46:398:15608:4,46:156,1707:-19.8757,-126.861,-1409.16,0,-1270.69,-1269.67 0|0:540:407,7,84:407:15942:7,84:276,3136:-134.199,-234.009,-1542.73,0,-1288.11,-1285.54 0|0:550:454,14,50:454:17856:14,50:545,1919:-20.8457,-112.722,-1577.23,0,-1423.93,-1453.67 dDocent_Contig_3997 98 . N G 99.4983 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=100;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:30:-2.99957,-0.30103,0 dDocent_Contig_3998 9 . G A 703.925 . AB=0.232258;ABP=99.5217;AC=4;AF=0.333333;AN=12;AO=38;CIGAR=1X;DP=223;DPB=223;DPRA=0;EPP=85.5263;EPPR=404.733;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9784;NS=6;NUMALT=1;ODDS=0;PAIRED=0.736842;PAIREDR=0.735135;PAO=0;PQA=0;PQR=0;PRO=0;QA=1443;QR=7064;RO=185;RPL=0;RPP=85.5263;RPPR=404.733;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=185;SRP=404.733;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:25,1:25:965:1:39:0,-3.93022,-83.2672 0/0:42:41,1:41:1526:1:39:0,-8.74669,-133.709 0/1:25:20,5:20:774:5:192:-10.1243,0,-62.4621 0/1:36:31,5:31:1195:5:189:-6.53748,0,-97.0095 0/1:38:22,16:22:849:16:600:-42.8959,0,-65.2922 0/1:56:46,10:46:1755:10:384:-18.0568,0,-141.345 dDocent_Contig_3999 98 . N T 200.362 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=56.6667;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=202;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:2:0,2:0:0:2:64:-5.98716,-0.60206,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_4000 13 . A C 585.938 . AB=0.130435;ABP=466.856;AC=2;AF=0.166667;AN=12;AO=95;CIGAR=2X;DP=1419;DPB=1419;DPRA=0;EPP=209.3;EPPR=2875.87;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.989474;PAIREDR=0.99093;PAO=0;PQA=0;PQR=0;PRO=0;QA=3690;QR=52172;RO=1323;RPL=0;RPP=209.3;RPPR=2875.87;RPR=95;RUN=1;SAF=95;SAP=209.3;SAR=0;SRF=1323;SRP=2875.87;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:206:199,6:199:7879:6:237:0,-40.1529,-687.066 0|0:271:254,17:254:9959:17:647:0,-23.0201,-837.194 0|1:142:114,28:114:4522:28:1105:-56.9935,0,-364.176 0|0:293:279,14:279:11014:14:539:0,-39.3548,-941.746 0|1:249:226,23:226:8875:23:883:-4.82199,0,-723.325 0|0:258:251,7:251:9923:7:279:0,-52.184,-867.012 dDocent_Contig_4001 61 . G T 1358.64 . AB=0.102797;ABP=3629.03;AC=3;AF=0.25;AN=12;AO=367;CIGAR=1X;DP=5432;DPB=5432;DPRA=1.21033;EPP=799.941;EPPR=11001.5;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999605;PAO=0;PQA=0;PQR=0;PRO=0;QA=13978;QR=191486;RO=5065;RPL=367;RPP=799.941;RPPR=11001.5;RPR=0;RUN=1;SAF=367;SAP=799.941;SAR=0;SRF=5065;SRP=11001.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:976:867,109:867:32641:109:4147:-79.5083,0,-2642.02 0/0:1198:1103,95:1103:41483:95:3564:0,-39.7388,-3410.08 0/1:742:677,65:677:26467:65:2562:-7.35984,0,-2156.53 0/1:928:830,98:830:31226:98:3705:-54.2179,0,-2529.18 0/0:922:922,0:922:34728:0:0:0,-277.55,-3123.52 0/0:666:666,0:666:24941:0:0:0,-200.486,-2243.36 dDocent_Contig_4002 22 . T C 116554 . AB=0.0149796;ABP=4504.42;AC=8;AF=0.666667;AN=12;AO=92;CIGAR=1X6M1X2M;DP=4500;DPB=4499.9;DPRA=0;EPP=202.786;EPPR=1169.09;GTI=0;LEN=1;MEANALT=9;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.998138;PAO=0;PQA=0;PQR=0;PRO=0;QA=3520;QR=20899;RO=537;RPL=0;RPP=202.786;RPPR=1169.09;RPR=92;RUN=1;SAF=92;SAP=202.786;SAR=0;SRF=537;SRP=1169.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:505:99,1,394,2:99:3819:1,394,2:39,15218,62:-1219.99,-1246.59,-1559.88,0,-310.425,-195.025,-1244.82,-1555.21,-308.66,-1557.81 0|1:543:76,0,442,18:76:2964:0,442,18:0,17103,679:-1381.94,-1404.82,-1648.44,0,-243.638,-110.582,-1349.18,-1592.81,-188.005,-1587.39 0|1:452:93,9,330,0:93:3615:9,330,0:358,12803,0:-1023.85,-1022.37,-1316.71,0,-267.586,-197.724,-1051.85,-1319.42,-297.064,-1348.9 1|1:618:45,24,495,43:45:1753:24,495,43:938,19223,1641:-1570.83,-1507.26,-1644.11,-4.93868,-71.8954,0,-1449.77,-1516.73,-14.4076,-1580.89 1|1:1227:74,0,1115,16:74:2881:0,1115,16:0,43133,624:-3619.33,-3641.6,-3878.38,-98.8727,-335.648,0,-3590.32,-3827.09,-284.36,-3822.27 0|1:1155:150,78,905,13:150:5867:78,905,13:3032,35192,514:-2846.7,-2642.72,-3101.61,0,-233.238,-209.944,-2849.56,-3082.79,-440.079,-3328.02 dDocent_Contig_4003 20 . T G 60.3381 . AB=0.103516;ABP=702.106;AC=3;AF=0.25;AN=12;AO=60;CIGAR=1X;DP=1295;DPB=1295;DPRA=0.41844;EPP=133.299;EPPR=2684.78;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995951;PAO=0;PQA=0;PQR=0;PRO=0;QA=2058;QR=49504;RO=1235;RPL=0;RPP=133.299;RPPR=2684.78;RPR=60;RUN=1;SAF=60;SAP=133.299;SAR=0;SRF=1235;SRP=2684.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:133:119,14:119:4801:14:477:-3.21028,0,-391.932 0/1:212:191,21:191:7667:21:745:-3.55227,0,-625.792 0/0:78:71,7:71:2838:7:231:0,-2.37176,-234.402 0/1:167:149,18:149:5954:18:605:-4.48644,0,-485.36 0/0:371:371,0:371:14888:0:0:0,-111.682,-1338.72 0/0:334:334,0:334:13356:0:0:0,-100.544,-1201.02 dDocent_Contig_4004 78 . A T 125.886 . AB=0.139241;ABP=92.3155;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=226;DPB=226;DPRA=1.19417;EPP=31.2394;EPPR=465.534;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.846154;PAIREDR=0.525822;PAO=0;PQA=0;PQR=0;PRO=0;QA=497;QR=7987;RO=213;RPL=13;RPP=31.2394;RPPR=465.534;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=213;SRP=465.534;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:42,2:42:1561:2:78:0,-5.84185,-133.354 0/0:44:44,0:44:1619:0:0:0,-13.2453,-145.976 0/0:19:19,0:19:733:0:0:0,-5.71957,-66.2975 0/1:44:36,8:36:1375:8:300:-14.1089,0,-110.777 0/1:35:32,3:32:1219:3:119:-0.559345,0,-99.4501 0/0:40:40,0:40:1480:0:0:0,-12.0412,-133.462 dDocent_Contig_4005 7 . C T 470.864 . AB=0.132686;ABP=365.126;AC=1;AF=0.0833333;AN=12;AO=82;CIGAR=1X;DP=1908;DPB=1908;DPRA=0.81768;EPP=181.071;EPPR=3957.26;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.841463;PAIREDR=0.89017;PAO=0;PQA=0;PQR=0;PRO=0;QA=3145;QR=69965;RO=1821;RPL=0;RPP=181.071;RPPR=3957.26;RPR=82;RUN=1;SAF=82;SAP=181.071;SAR=0;SRF=1821;SRP=3957.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:309:267,41:267:10241:41:1567:-48.3083,0,-828.326 0/0:346:336,8:336:12932:8:310:0,-75.5282,-1135.08 0/0:189:177,12:177:6814:12:465:0,-14.6928,-570.933 0/0:340:318,21:318:12241:21:803:0,-29.835,-1028.56 0/0:353:353,0:353:13554:0:0:0,-106.264,-1219.24 0/0:371:370,0:370:14183:0:0:0,-111.381,-1275.44 dDocent_Contig_4006 83 . C A 1402.84 . AB=0.515873;ABP=3.28604;AC=7;AF=0.583333;AN=12;AO=403;CIGAR=1X;DP=863;DPB=863;DPRA=1.03014;EPP=878.114;EPPR=999.716;GTI=0;LEN=1;MEANALT=1.25;MQM=7.01489;MQMR=7.0719;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13696;QR=15799;RO=459;RPL=403;RPP=878.114;RPPR=999.716;RPR=0;RUN=1;SAF=403;SAP=878.114;SAR=0;SRF=459;SRP=999.716;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:164:22,142:22:767:142:4859:-76.0224,-35.4503,0 1/1:173:51,121:51:1752:121:4119:-41.3506,-17.1808,0 1/1:118:43,75:43:1488:75:2514:-19.6569,-8.38556,0 0/1:126:61,65:61:2123:65:2204:-3.01124,0,-0.538395 0/0:124:124,0:124:4298:0:0:0,-37.3277,-78.1189 0/0:158:158,0:158:5371:0:0:0,-47.5627,-99.2543 dDocent_Contig_4007 19 . A C 271.096 . AB=0.111782;ABP=436.314;AC=2;AF=0.166667;AN=12;AO=37;CIGAR=1X;DP=881;DPB=881;DPRA=1.20364;EPP=83.3548;EPPR=1835.73;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.998815;PAO=0;PQA=0;PQR=0;PRO=0;QA=1437;QR=32932;RO=844;RPL=0;RPP=83.3548;RPPR=1835.73;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=844;SRP=1835.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:133:133,0:133:5151:0:0:0,-40.037,-463.53 0/0:203:203,0:203:7917:0:0:0,-61.1091,-712.204 0/0:74:74,0:74:2884:0:0:0,-22.2762,-259.691 0/0:140:140,0:140:5461:0:0:0,-42.1442,-491.388 0/1:176:155,21:155:6094:21:822:-21.3117,0,-495.308 0/1:155:139,16:139:5425:16:615:-9.01969,0,-441.477 dDocent_Contig_4008 14 . C T 220.237 . AB=0.150685;ABP=80.3802;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X2M1X1M;DP=165;DPB=165;DPRA=0.852459;EPP=31.2394;EPPR=307.016;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.923077;PAIREDR=0.942857;PAO=0;PQA=0;PQR=0;PRO=0;QA=514;QR=5559;RO=140;RPL=0;RPP=31.2394;RPPR=307.016;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=140;SRP=307.016;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:27:19,4,4:19:761:4,4:158,162:-7.64372,-0.367599,-61.8515,0,-49.6965,-61.4921 0|0:31:21,4,6:21:841:4,6:156,233:-12.8223,-6.32134,-74.4095,0,-56.4714,-67.4855 0|1:15:11,3,1:11:433:3,1:122,41:-6.74944,0,-34.7011,-6.67587,-32.2187,-41.9837 0|0:31:29,2,0:29:1135:2,0:78,0:0,-1.92846,-95.0363,-8.72987,-95.6384,-102.05 0|0:20:20,0,0:20:799:0,0:0,0:0,-6.0206,-72.229,-6.0206,-72.229,-72.229 0|0:41:40,0,1:40:1590:0,1:0,41:0,-12.0412,-142.932,-8.24766,-139.548,-139.247 dDocent_Contig_4009 71 . G T 48.6136 . AB=0.113208;ABP=71.8828;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=298;DPB=298;DPRA=1.15556;EPP=31.2394;EPPR=621.88;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.307692;PAIREDR=0.691228;PAO=0;PQA=0;PQR=0;PRO=0;QA=516;QR=11112;RO=285;RPL=2;RPP=16.5402;RPPR=15.8182;RPR=11;RUN=1;SAF=2;SAP=16.5402;SAR=11;SRF=122;SRP=15.8182;SRR=163;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:37,2:37:1407:2:80:0,-4.14838,-119.309 0/0:58:55,3:55:2158:3:114:0,-6.82752,-183.782 0/1:53:47,6:47:1846:6:244:-6.38424,0,-150.407 0/0:58:56,2:56:2185:2:78:0,-10.0564,-189.437 0/0:29:29,0:29:1135:0:0:0,-8.72987,-102.434 0/0:61:61,0:61:2381:0:0:0,-18.3628,-214.464 dDocent_Contig_4010 1 . N G 99.981 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=100;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:59:-5.60086,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 dDocent_Contig_4011 94 . T C 329.642 . AB=0.137184;ABP=319.724;AC=1;AF=0.0833333;AN=12;AO=327;CIGAR=1X;DP=3903;DPB=3903;DPRA=0;EPP=713.082;EPPR=7763.85;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99972;PAO=0;PQA=0;PQR=0;PRO=0;QA=11258;QR=123046;RO=3574;RPL=327;RPP=713.082;RPPR=7763.85;RPR=0;RUN=1;SAF=327;SAP=713.082;SAR=0;SRF=3574;SRP=7763.85;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:277:239,38:239:8249:38:1303:-34.1858,0,-659.098 0/0:706:653,52:653:22446:52:1780:0,-52.0905,-1859.26 0/0:468:422,45:422:14488:45:1556:0,-0.599912,-1163.45 0/0:614:555,59:555:19096:59:2041:0,-0.868595,-1534.38 0/0:825:759,66:759:26124:66:2305:0,-40.6374,-2142.93 0/0:1013:946,67:946:32643:67:2273:0,-100.121,-2732.31 dDocent_Contig_4012 18 . T G 783.393 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=36;CIGAR=2M1X9M;DP=2396;DPB=2409.75;DPRA=1.09497;EPP=81.1833;EPPR=4732.48;GTI=0;LEN=1;MEANALT=9;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.999541;PAO=0;PQA=0;PQR=0;PRO=0;QA=1408;QR=84638;RO=2178;RPL=0;RPP=81.1833;RPPR=4732.48;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=2178;SRP=4732.48;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:351:322,17,0:322:12523:17,0:668,0:0,-41.9256,-1066,-96.9317,-1071.12,-1126.06 0|0:391:346,7,26:346:13454:7,26:262,1034:0,-82.7038,-1186.2,-18.9644,-1103.17,-1116.79 0|0:337:316,9,7:316:12367:9,7:340,276:0,-67.2354,-1081.43,-72.3926,-1061.43,-1087.19 0|0:365:359,2,0:359:13899:2,0:74,0:0,-101.998,-1243.17,-108.07,-1243.78,-1249.83 0|0:504:429,66,0:429:16631:66,0:2544,0:-79.8622,0,-1346.55,-209.004,-1366.42,-1575.29 0|0:448:406,31,3:406:15764:31,3:1182,98:0,-25.175,-1311.21,-114.311,-1312.64,-1408.68 dDocent_Contig_4013 7 . C T 85.4139 . AB=0.181818;ABP=22.3561;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X1M;DP=308;DPB=308;DPRA=0.436364;EPP=13.8677;EPPR=619.708;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=59.2535;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.93662;PAO=0;PQA=0;PQR=0;PRO=0;QA=192;QR=10830;RO=284;RPL=0;RPP=13.8677;RPPR=619.708;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=284;SRP=619.708;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:22:15,3,0,4:15:567:3,0,4:115,0,153:-8.07606,-4.91403,-50.4398,-12.5915,-51.3429,-59.0394,0,-38.7866,-46.4815,-45.2774 0|0:24:21,0,3,0:21:798:0,3,0:0,117,0:-3.68566,-10.0073,-75.4406,0,-65.8217,-64.9186,-10.0073,-75.4406,-65.8217,-75.4406 0|0:42:41,0,0,1:41:1552:0,0,1:0,0,39:0,-12.3422,-138.34,-12.3422,-138.34,-138.34,-8.74669,-135.134,-135.134,-134.833 0|0:28:26,0,2,0:26:985:0,2,0:0,78,0:0,-7.82678,-88.1545,-1.50121,-82.1944,-81.5924,-7.82678,-88.1545,-82.1944,-88.1545 0|0:126:121,1,4,0:121:4633:1,4,0:37,150,0:0,-34.1029,-414.076,-25.9796,-403.959,-405.082,-36.4246,-414.377,-406.286,-416.704 0|0:66:60,0,3,0:60:2295:0,3,0:0,108,0:0,-18.0618,-206.014,-9.74251,-197.674,-196.77,-18.0618,-206.014,-197.674,-206.014 dDocent_Contig_4014 69 . G A 249.977 . AB=0.122137;ABP=490.398;AC=1;AF=0.0833333;AN=12;AO=118;CIGAR=1X;DP=4583;DPB=4583;DPRA=0;EPP=259.244;EPPR=9694.29;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.999328;PAO=0;PQA=0;PQR=0;PRO=0;QA=3938;QR=150396;RO=4463;RPL=118;RPP=259.244;RPPR=9694.29;RPR=0;RUN=1;SAF=118;SAP=259.244;SAR=0;SRF=4463;SRP=9694.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:536:528,8:528:17788:8:270:0,-136.723,-1576.07 0/0:700:649,51:649:21903:51:1727:0,-55.0071,-1815.2 0/1:393:345,48:345:11700:48:1606:-26.5205,0,-934.661 0/0:626:620,6:620:20910:6:200:0,-170.117,-1863.26 0/0:1264:1262,2:1262:42501:2:38:0,-376.893,-3820.47 0/0:1064:1059,3:1059:35594:3:97:0,-310.967,-3193.63 dDocent_Contig_4015 8 . A G 31.4483 . AB=0.120482;ABP=106.849;AC=1;AF=0.0833333;AN=12;AO=23;CIGAR=1X;DP=430;DPB=430;DPRA=1.30877;EPP=52.9542;EPPR=884.628;GTI=0;LEN=1;MEANALT=1.2;MQM=37.0435;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.559113;PAO=0;PQA=0;PQR=0;PRO=0;QA=771;QR=15443;RO=406;RPL=0;RPP=52.9542;RPPR=884.628;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=406;SRP=884.628;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:57:57,0:57:2148:0:0:0,-17.1587,-193.544 0/0:103:99,4:99:3775:4:134:0,-20.4582,-329.316 0/0:67:63,3:63:2406:3:96:0,-12.7249,-209.22 0/1:83:73,10:73:2771:10:339:-4.66739,0,-224.594 0/0:47:43,4:43:1642:4:137:0,-1.94233,-135.84 0/0:73:71,2:71:2701:2:65:0,-15.9415,-237.242 dDocent_Contig_4016 53 . C G 76.0098 . AB=0.123288;ABP=92.9925;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=189;DPB=189;DPRA=1.25862;EPP=22.5536;EPPR=393.875;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.333333;PAIREDR=0.838889;PAO=0;PQA=0;PQR=0;PRO=0;QA=356;QR=7020;RO=180;RPL=9;RPP=22.5536;RPPR=393.875;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=180;SRP=393.875;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:583:0:0:0,-4.51545,-52.8047 0/1:40:35,5:35:1359:5:198:-6.15639,0,-110.523 0/0:27:27,0:27:1067:0:0:0,-8.12781,-96.3262 0/1:33:29,4:29:1110:4:158:-4.66628,0,-90.2505 0/0:31:31,0:31:1231:0:0:0,-9.33193,-111.065 0/0:43:43,0:43:1670:0:0:0,-12.9443,-150.533 dDocent_Contig_4017 1 . N G 759.801 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=29;CIGAR=1X;DP=29;DPB=29;DPRA=0;EPP=65.983;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=39.5517;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=951;QR=0;RO=0;RPL=0;RPP=65.983;RPPR=0;RPR=29;RUN=1;SAF=0;SAP=65.983;SAR=29;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:100:-8.11404,-0.90309,0 1/1:6:0,6:0:0:6:195:-15.8378,-1.80618,0 ./.:.:.:.:.:.:.:. 1/1:8:0,8:0:0:8:256:-22.008,-2.40824,0 1/1:4:0,4:0:0:4:133:-12.2986,-1.20412,0 1/1:8:0,8:0:0:8:267:-16.9433,-2.40824,0 dDocent_Contig_4018 9 . G T 238.754 . AB=0.120536;ABP=283.169;AC=1;AF=0.0833333;AN=12;AO=50;CIGAR=1X;DP=1016;DPB=1016;DPRA=1.532;EPP=111.584;EPPR=2100.65;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1918;QR=36372;RO=966;RPL=0;RPP=111.584;RPPR=2100.65;RPR=50;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=966;SRP=2100.65;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:162:162,0:162:6096:0:0:0,-48.7669,-548.606 0/0:178:177,1:177:6624:1:39:0,-49.6868,-592.197 0/0:88:88,0:88:3312:0:0:0,-26.4906,-298.227 0/0:114:109,5:109:4141:5:194:0,-16.4846,-354.947 0/1:224:197,27:197:7395:27:1028:-25.3983,0,-598.006 0/0:250:233,17:233:8804:17:657:0,-15.7909,-732.67 dDocent_Contig_4019 98 . N T 307.325 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=11;CIGAR=1X;DP=11;DPB=11;DPRA=0;EPP=26.8965;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=326;QR=0;RO=0;RPL=11;RPP=26.8965;RPPR=0;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:117:-10.8189,-1.20412,0 1/1:6:0,6:0:0:6:175:-16.0366,-1.80618,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_4020 27 . T A 115135 . AB=0.752502;ABP=2658.98;AC=6;AF=0.5;AN=12;AO=3609;CIGAR=6M2X2M;DP=4796;DPB=4770.3;DPRA=0;EPP=7839.85;EPPR=2215.74;GTI=0;LEN=1;MEANALT=7;MQM=59.9925;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=143690;QR=39506;RO=1019;RPL=0;RPP=7839.85;RPPR=2215.74;RPR=3609;RUN=1;SAF=3609;SAP=7839.85;SAR=0;SRF=1019;SRP=2215.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:707:123,0,577:123:4720:0,577:0,22927:-1850.48,-1887.51,-2274.9,0,-387.446,-213.752 0|1:815:247,5,540:247:9580:5,540:191,21440:-1690.56,-1749.25,-2534.79,0,-771.393,-624.507 0|1:570:107,0,441:107:4162:0,441:0,17633:-1420.22,-1452.43,-1794.44,0,-342.028,-209.274 0|1:736:167,0,564:167:6492:0,564:0,22433:-1796.73,-1847,-2380.48,0,-533.585,-363.804 0|1:1026:164,0,857:164:6355:0,857:0,34109:-2759.07,-2808.44,-3330.5,0,-522.141,-264.158 0|1:942:211,59,630:211:8197:59,630:2179,25148:-2007.61,-1892.94,-2548.7,0,-495.34,-483.876 dDocent_Contig_4021 98 . N A 611.848 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=19;CIGAR=1X;DP=19;DPB=19;DPRA=0;EPP=44.2683;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=658;QR=0;RO=0;RPL=19;RPP=44.2683;RPPR=0;RPR=0;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:3:0,3:0:0:3:102:-9.5168,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:104:-9.70309,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:12:0,12:0:0:12:417:-37.8633,-3.61236,0 dDocent_Contig_4022 12 . T A 24264.4 . AB=0.630659;ABP=189.7;AC=6;AF=0.5;AN=12;AO=794;CIGAR=1X;DP=1259;DPB=1259;DPRA=0;EPP=1727.16;EPPR=1012.74;GTI=0;LEN=1;MEANALT=1;MQM=59.5756;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.808602;PAO=0;PQA=0;PQR=0;PRO=0;QA=31394;QR=18665;RO=465;RPL=0;RPP=1727.16;RPPR=1012.74;RPR=794;RUN=1;SAF=794;SAP=1727.16;SAR=0;SRF=465;SRP=1012.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:110:81,29:81:3228:29:1172:-71.3935,0,-257.464 0/1:183:80,103:80:3182:103:4076:-309.669,0,-231.363 0/1:145:78,67:78:3147:67:2644:-194.437,0,-239.643 0/1:151:80,71:80:3218:71:2815:-204.293,0,-244.222 0/1:394:78,316:78:3155:316:12425:-997.821,0,-165.405 0/1:276:68,208:68:2735:208:8262:-660.051,0,-163.172 dDocent_Contig_4023 85 . C T 341.842 . AB=0.21875;ABP=68.9688;AC=3;AF=0.25;AN=12;AO=23;CIGAR=1X;DP=205;DPB=205;DPRA=0.964286;EPP=52.9542;EPPR=398.218;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.173913;PAIREDR=0.450549;PAO=0;PQA=0;PQR=0;PRO=0;QA=786;QR=6398;RO=182;RPL=23;RPP=52.9542;RPPR=398.218;RPR=0;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=182;SRP=398.218;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:27,9:27:939:9:315:-17.8517,0,-73.9884 0/0:39:37,2:37:1289:2:55:0,-6.51651,-111.09 0/0:22:22,0:22:780:0:0:0,-6.62266,-70.5228 0/1:39:29,10:29:1024:10:344:-19.552,0,-80.7327 0/1:21:19,2:19:656:2:72:-0.515093,0,-53.04 0/0:48:48,0:48:1710:0:0:0,-14.4494,-154.185 dDocent_Contig_4024 38 . T C 17496.2 . AB=0.264137;ABP=1353.09;AC=5;AF=0.416667;AN=12;AO=773;CIGAR=1X;DP=3210;DPB=3210;DPRA=0;EPP=1604.3;EPPR=4788.95;GTI=0;LEN=1;MEANALT=2.83333;MQM=52.9754;MQMR=57.5092;NS=6;NUMALT=1;ODDS=0;PAIRED=0.221216;PAIREDR=0.465776;PAO=0;PQA=0;PQR=0;PRO=0;QA=30730;QR=94820;RO=2396;RPL=0;RPP=1681.56;RPPR=5205.86;RPR=773;RUN=1;SAF=764;SAP=1604.3;SAR=9;SRF=2347;SRP=4788.95;SRR=49;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:590:387,190:387:15193:190:7554:-497.075,0,-1178.33 0/1:670:465,203:465:18413:203:8124:-512.915,0,-1426.5 0/1:500:379,113:379:15068:113:4487:-248.792,0,-1180.87 0/1:682:498,172:498:19774:172:6790:-400.707,0,-1562.53 0/0:416:379,35:379:14970:35:1377:0,-4.01987,-1205.37 0/1:352:288,60:288:11402:60:2398:-99.3531,0,-911.739 dDocent_Contig_4027 98 . N T 229.273 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=240;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:72:-6.65896,-1.20412,0 1/1:4:0,4:0:0:4:134:-12.3913,-1.20412,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_4028 24 . A G 142.448 . AB=0.113095;ABP=221.45;AC=2;AF=0.166667;AN=12;AO=19;CIGAR=1X;DP=341;DPB=341;DPRA=1.9422;EPP=44.2683;EPPR=700.053;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.616822;PAO=0;PQA=0;PQR=0;PRO=0;QA=748;QR=12785;RO=321;RPL=0;RPP=44.2683;RPPR=700.053;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=321;SRP=700.053;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:52:52,0:52:2056:0:0:0,-15.6536,-185.224 0/1:87:79,8:79:3132:8:322:-3.15874,0,-255.77 0/1:81:70,11:70:2823:11:426:-14.3029,0,-229.78 0/0:49:48,0:48:1913:0:0:0,-14.4494,-172.036 0/0:36:36,0:36:1426:0:0:0,-10.8371,-128.587 0/0:36:36,0:36:1435:0:0:0,-10.8371,-129.405 dDocent_Contig_4029 26 . C T 3701.91 . AB=0.184676;ABP=882.188;AC=3;AF=0.25;AN=12;AO=218;CIGAR=1X;DP=3313;DPB=3313;DPRA=0.422841;EPP=476.391;EPPR=6719.37;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.984804;PAO=0;PQA=0;PQR=0;PRO=0;QA=8739;QR=124418;RO=3093;RPL=0;RPP=476.391;RPPR=6719.37;RPR=218;RUN=1;SAF=218;SAP=476.391;SAR=0;SRF=3093;SRP=6719.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:363:278,84:278:11196:84:3371:-194.059,0,-897.439 0/0:500:470,30:470:18924:30:1166:0,-45.2975,-1596.28 0/1:349:312,37:312:12600:37:1501:-30.2675,0,-1027.96 0/1:306:239,67:239:9599:67:2701:-151.086,0,-771.158 0/0:1249:1248,0:1248:50089:0:0:0,-375.685,-4502.58 0/0:546:546,0:546:22010:0:0:0,-164.362,-1978.9 dDocent_Contig_4030 48 . T G 155.487 . AB=0.125;ABP=149.585;AC=2;AF=0.166667;AN=12;AO=72;CIGAR=1X;DP=2000;DPB=2000;DPRA=4.4505;EPP=159.356;EPPR=4185.27;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2867;QR=76656;RO=1926;RPL=0;RPP=159.356;RPPR=4185.27;RPR=72;RUN=1;SAF=72;SAP=159.356;SAR=0;SRF=1926;SRP=4185.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:63:53,10:53:2118:10:393:-16.7609,0,-171.836 0/0:136:136,0:136:5399:0:0:0,-40.9401,-485.755 0/1:57:52,5:52:2056:5:199:-1.12873,0,-168.061 0/0:66:66,0:66:2626:0:0:0,-19.868,-236.456 0/0:1036:1009,25:1009:40212:25:996:0,-221.733,-3525.38 0/0:642:610,32:610:24245:32:1279:0,-77.8822,-2064.57 dDocent_Contig_4032 41 . A T 5453.77 . AB=0.587097;ABP=23.4362;AC=6;AF=0.5;AN=12;AO=182;CIGAR=1X;DP=310;DPB=310;DPRA=0;EPP=398.218;EPPR=280.959;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7203;QR=5089;RO=128;RPL=0;RPP=398.218;RPPR=280.959;RPR=182;RUN=1;SAF=182;SAP=398.218;SAR=0;SRF=128;SRP=280.959;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:53:20,33:20:804:33:1297:-101.041,0,-56.7204 0/1:61:16,45:16:635:45:1785:-142.5,0,-39.1208 0/1:116:55,61:55:2206:61:2389:-180.24,0,-163.792 0/1:59:23,36:23:909:36:1451:-113.076,0,-64.3559 0/1:11:6,5:6:236:5:200:-15.0671,0,-18.2992 0/1:10:8,2:8:299:2:81:-4.67543,0,-24.2489 dDocent_Contig_4033 41 . G A 6252.62 . AB=0.338959;ABP=163.171;AC=4;AF=0.333333;AN=12;AO=248;CIGAR=1X;DP=1281;DPB=1281;DPRA=0;EPP=541.535;EPPR=2237.46;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.987903;PAIREDR=0.998064;PAO=0;PQA=0;PQR=0;PRO=0;QA=9673;QR=40788;RO=1033;RPL=0;RPP=541.535;RPPR=2237.46;RPR=248;RUN=1;SAF=248;SAP=541.535;SAR=0;SRF=1033;SRP=2246.14;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:187:93,94:93:3643:94:3687:-275.594,0,-271.6 0/1:233:153,80:153:6047:80:3105:-209.414,0,-473.877 0/1:89:57,32:57:2254:32:1264:-87.2452,0,-176.248 0/1:202:167,35:167:6645:35:1342:-60.231,0,-536.97 0/0:312:310,2:310:12207:2:77:0,-86.6125,-1090.5 0/0:258:253,5:253:9992:5:198:0,-59.4686,-880.492 dDocent_Contig_4034 51 . A G 3009.09 . AB=0.272727;ABP=205.352;AC=6;AF=0.5;AN=12;AO=123;CIGAR=1X9M;DP=451;DPB=445;DPRA=0;EPP=270.101;EPPR=667.481;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.96748;PAIREDR=0.996732;PAO=0;PQA=0;PQR=0;PRO=0;QA=4904;QR=11987;RO=306;RPL=123;RPP=270.101;RPPR=667.481;RPR=0;RUN=1;SAF=123;SAP=270.101;SAR=0;SRF=306;SRP=667.481;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:72:51,0,21:51:2013:0,21:0,836:-53.8792,-69.2318,-234.867,0,-166.032,-159.71 0|1:67:52,0,14:52:2044:0,14:0,558:-30.2864,-45.9399,-214.062,0,-168.111,-163.896 0|1:78:45,0,32:45:1736:0,32:0,1283:-92.1515,-105.698,-248.237,0,-142.533,-132.901 0|1:64:38,0,25:38:1505:0,25:0,1005:-71.4021,-82.8413,-206.71,0,-123.887,-116.362 0|1:91:69,3,18:69:2696:3,18:118,716:-38.1831,-49.2486,-269.968,0,-211.918,-216.205 0|1:79:51,12,13:51:1993:12,13:463,506:-26.2289,-3.57489,-163.803,0,-125.834,-159.929 dDocent_Contig_4035 22 . A T 965.381 . AB=0.229592;ABP=127.493;AC=2;AF=0.166667;AN=12;AO=45;CIGAR=1X1M1X;DP=578;DPB=578;DPRA=1.02618;EPP=100.727;EPPR=1156.06;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.909605;PAO=0;PQA=0;PQR=0;PRO=0;QA=1757;QR=20308;RO=531;RPL=0;RPP=100.727;RPPR=1156.06;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=531;SRP=1156.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:68:68,0:68:2579:0:0:0,-20.47,-232.291 0|0:132:132,0:132:5076:0:0:0,-39.736,-456.831 0|0:78:77,0:77:2959:0:0:0,-23.1793,-266.352 0|0:104:103,0:103:3925:0:0:0,-31.0061,-353.22 0|1:109:82,27:82:3125:27:1045:-61.5398,0,-248.58 0|1:87:69,18:69:2644:18:712:-38.2202,0,-211.942 dDocent_Contig_4036 98 . N A 148.802 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=145;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 1/1:2:0,2:0:0:2:44:-4.17917,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 dDocent_Contig_4037 48 . C T 418.504 . AB=0.106122;ABP=993.441;AC=1;AF=0.0833333;AN=12;AO=110;CIGAR=1X;DP=4691;DPB=4691;DPRA=0.992998;EPP=241.872;EPPR=9898.41;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999781;PAO=0;PQA=0;PQR=0;PRO=0;QA=4091;QR=177422;RO=4557;RPL=0;RPP=241.872;RPPR=9898.41;RPR=110;RUN=1;SAF=110;SAP=241.872;SAR=0;SRF=4557;SRP=9898.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:735:644,78:644:24992:78:2896:-43.0722,0,-2029.62 0/0:911:900,10:900:35139:10:374:0,-240.045,-3125.63 0/0:672:661,11:661:25725:11:417:0,-164.413,-2275.36 0/0:802:790,11:790:30616:11:404:0,-204.562,-2716.31 0/0:738:738,0:738:28815:0:0:0,-222.16,-2591.02 0/0:833:824,0:824:32135:0:0:0,-248.049,-2889.15 dDocent_Contig_4038 50 . A C 2552.56 . AB=0.41629;ABP=16.4616;AC=5;AF=0.416667;AN=12;AO=95;CIGAR=1X;DP=277;DPB=277;DPRA=0;EPP=209.3;EPPR=398.218;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.947368;PAIREDR=0.934066;PAO=0;PQA=0;PQR=0;PRO=0;QA=3782;QR=7184;RO=182;RPL=95;RPP=209.3;RPPR=398.218;RPR=0;RUN=1;SAF=95;SAP=209.3;SAR=0;SRF=182;SRP=398.218;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:56:53,3:53:2097:3:122:0,-5.48519,-177.541 0/1:56:45,11:45:1777:11:435:-22.6445,0,-143.3 0/1:35:25,10:25:988:10:397:-25.5497,0,-78.6848 0/1:32:24,8:24:922:8:322:-19.7149,0,-73.6389 0/1:52:16,36:16:644:36:1441:-114.281,0,-42.6413 0/1:46:19,27:19:756:27:1065:-82.2883,0,-54.5151 dDocent_Contig_4039 88 . A G 789.888 . AB=0.126961;ABP=850.315;AC=1;AF=0.0833333;AN=12;AO=137;CIGAR=1X;DP=3914;DPB=3914;DPRA=1.28908;EPP=300.502;EPPR=8200.32;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=59.9995;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4965;QR=136551;RO=3775;RPL=137;RPP=300.502;RPPR=8200.32;RPR=0;RUN=1;SAF=137;SAP=300.502;SAR=0;SRF=3775;SRP=8200.32;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:544:543,0:543:19522:0:0:0,-163.459,-1756.32 0/0:641:641,0:641:23100:0:0:0,-192.96,-2078.25 0/0:605:605,0:605:21967:0:0:0,-182.123,-1976.31 0/0:590:590,0:590:21372:0:0:0,-177.608,-1922.8 0/0:833:784,48:784:28477:48:1728:0,-94.7922,-2406.11 0/1:701:612,89:612:22113:89:3237:-80.5117,0,-1778.43 dDocent_Contig_4040 107 . N C 1159.41 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=38;CIGAR=1X;DP=38;DPB=38;DPRA=0;EPP=85.5263;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1263;QR=0;RO=0;RPL=0;RPP=85.5263;RPPR=0;RPR=38;RUN=1;SAF=0;SAP=85.5263;SAR=38;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:13:0,13:0:0:13:446:-40.468,-3.91339,0 1/1:13:0,13:0:0:13:445:-40.3775,-3.91339,0 1/1:8:0,8:0:0:8:270:-24.6288,-2.40824,0 1/1:2:0,2:0:0:2:56:-5.31935,-0.60206,0 1/1:2:0,2:0:0:2:46:-4.36896,-0.60206,0 dDocent_Contig_4041 9 . C T 15287.2 . AB=0.0314637;ABP=1396.87;AC=0;AF=0;AN=12;AO=23;CIGAR=1X3M1X;DP=1138;DPB=1138;DPRA=0;EPP=52.9542;EPPR=1088.75;GTI=0;LEN=1;MEANALT=4.25;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=1;PAIREDR=0.998;PAO=0;PQA=0;PQR=0;PRO=0;QA=892;QR=19374;RO=500;RPL=0;RPP=52.9542;RPPR=1088.75;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=500;SRP=1088.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:186:52,4,10,0,0,120:52:2019:4,10,0,0,120:154,390,0,0,4637:-365.149,-368.185,-532.872,-348.744,-502.018,-511.626,-380.803,-534.076,-514.636,-546.694,-380.803,-534.076,-514.636,-546.694,-546.694,0,-153.273,-133.832,-165.891,-165.891,-129.767 0|0:225:111,4,3,0,0,105:111:4306:4,3,0,0,105:157,117,0,0,4097:-303.37,-323.872,-676.443,-327.167,-668.029,-680.039,-336.785,-677.647,-680.942,-690.559,-336.785,-677.647,-680.942,-690.559,-690.559,0,-340.888,-344.183,-353.8,-353.8,-322.192 0|0:137:49,8,6,0,0,72:49:1915:8,6,0,0,72:318,230,0,0,2799:-215.231,-203.798,-358.829,-211.105,-342.361,-366.737,-229.981,-361.237,-368.543,-387.42,-229.981,-361.237,-368.543,-387.42,-387.42,0,-131.254,-138.562,-157.438,-157.438,-135.763 0|0:183:88,11,4,0,0,74:88:3366:11,4,0,0,74:407,155,0,0,2855:-207.949,-201.422,-474.299,-221.705,-464.876,-496.69,-234.439,-477.61,-497.894,-510.628,-234.439,-477.61,-497.894,-510.628,-510.628,0,-243.176,-263.46,-276.194,-276.194,-253.918 0|0:224:105,4,0,0,24,87:105:4061:4,0,0,24,87:156,0,0,939,3404:-248.264,-267.049,-599.399,-279.872,-600.603,-613.426,-279.872,-600.603,-613.426,-613.426,-202.678,-523.409,-536.231,-536.231,-529.007,0,-320.729,-333.552,-333.552,-256.357,-307.362 0|0:183:95,3,0,13,0,72:95:3707:3,0,13,0,72:94,0,523,0,2783:-199.974,-221.563,-525.387,-228.572,-526.29,-533.3,-185.467,-483.187,-490.197,-486.284,-228.572,-526.29,-533.3,-490.197,-533.3,0,-297.724,-304.733,-261.629,-304.733,-283.059 dDocent_Contig_4042 28 . G A 139.411 . AB=0.110465;ABP=229.702;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=613;DPB=613;DPRA=0.977419;EPP=46.4397;EPPR=1288.52;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.6875;PAO=0;PQA=0;PQR=0;PRO=0;QA=799;QR=23367;RO=592;RPL=0;RPP=46.4397;RPPR=1288.52;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=592;SRP=1288.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:69:68,0:68:2673:0:0:0,-20.47,-240.289 0/1:88:78,10:78:3039:10:396:-9.50638,0,-247.098 0/0:38:38,0:38:1498:0:0:0,-11.4391,-135.057 0/1:84:75,9:75:3016:9:362:-7.65656,0,-246.235 0/0:131:130,1:130:5150:1:41:0,-35.3404,-459.262 0/0:203:203,0:203:7991:0:0:0,-61.1091,-718.77 dDocent_Contig_4043 25 . C A 33.448 . AB=0.0944882;ABP=184.405;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=577;DPB=577;DPRA=1.12915;EPP=33.4109;EPPR=1225.55;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.923623;PAO=0;PQA=0;PQR=0;PRO=0;QA=556;QR=22436;RO=563;RPL=0;RPP=33.4109;RPPR=1225.55;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=563;SRP=1225.55;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:78:78,0:78:3071:0:0:0,-23.4803,-276.472 0/1:127:115,12:115:4600:12:475:-4.86748,0,-375.676 0/0:109:108,1:108:4330:1:41:0,-28.7177,-385.546 0/0:70:69,1:69:2731:1:40:0,-17.0764,-241.909 0/0:74:74,0:74:2980:0:0:0,-22.2762,-268.279 0/0:119:119,0:119:4724:0:0:0,-35.8226,-425.058 dDocent_Contig_4044 9 . C A 1290.72 . AB=0.0789474;ABP=120.041;AC=0;AF=0;AN=12;AO=6;CIGAR=1X2M3D1M;DP=470;DPB=434.286;DPRA=1.11765;EPP=16.0391;EPPR=836.856;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.666667;PAIREDR=0.942708;PAO=0;PQA=0;PQR=0;PRO=0;QA=236;QR=15096;RO=384;RPL=0;RPP=16.0391;RPPR=836.856;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=384;SRP=836.856;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:68:63,0,4:63:2474:0,4:0,155:0,-18.9649,-222.458,-6.18771,-209.727,-208.523 0|0:102:82,0,18:82:3227:0,18:0,699:-32.7814,-57.4658,-322.932,0,-265.501,-260.083 0|0:65:47,0,18:47:1846:0,18:0,692:-43.0351,-57.1835,-209.018,0,-152.221,-146.803 0|0:68:57,0,11:57:2239:0,11:0,421:-17.7686,-34.9273,-219.089,0,-184.546,-181.234 0|0:91:82,0,9:82:3235:0,9:0,355:-4.91583,-29.6003,-295.774,0,-266.568,-263.858 0|0:76:53,6,17:53:2075:6,17:236,677:-39.7931,-36.3356,-205.137,0,-151.198,-165.494 dDocent_Contig_4046 10 . T C 1158.99 . AB=0.19708;ABP=112.202;AC=0;AF=0;AN=12;AO=27;CIGAR=2X;DP=2491;DPB=2491;DPRA=0.311895;EPP=61.6401;EPPR=4895.34;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.995561;PAO=0;PQA=0;PQR=0;PRO=0;QA=1056;QR=88244;RO=2253;RPL=0;RPP=61.6401;RPPR=4895.34;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=2253;SRP=4895.34;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:533:495,0,1,36:495:19403:0,1,36:0,39,1378:0,-149.01,-1744.61,-145.804,-1741.4,-1741.1,-35.931,-1631.53,-1628.32,-1620.69 0|0:590:550,0,0,39:550:21572:0,0,39:0,0,1502:0,-165.566,-1939.61,-165.566,-1939.61,-1939.61,-42.2614,-1816.28,-1816.28,-1804.54 0|0:449:413,0,2,34:413:16212:0,2,34:0,54,1302:0,-124.325,-1457.69,-120.076,-1453.43,-1452.83,-17.3683,-1350.84,-1346.58,-1340.6 0|0:597:544,0,1,52:544:21277:0,1,52:0,35,1995:-0.0231534,-163.783,-1913.13,-160.936,-1910.29,-1909.99,0,-1749.38,-1746.54,-1733.73 0|0:137:66,27,44,0:66:2588:27,44,0:1056,1674,0:-117.421,-50.466,-255.171,0,-126.008,-199.581,-137.289,-263.299,-212.827,-350.119 0|0:185:185,0,0,0:185:7192:0,0,0:0,0,0:0,-55.6905,-647.064,-55.6905,-647.064,-647.064,-55.6905,-647.064,-647.064,-647.064 dDocent_Contig_4047 66 . T A 289.408 . AB=0.132597;ABP=215.227;AC=2;AF=0.166667;AN=12;AO=24;CIGAR=1X;DP=463;DPB=463;DPRA=1.28369;EPP=55.1256;EPPR=956.287;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.489749;PAO=0;PQA=0;PQR=0;PRO=0;QA=955;QR=17138;RO=439;RPL=10;RPP=4.45795;RPPR=30.8338;RPR=14;RUN=1;SAF=10;SAP=4.45795;SAR=14;SRF=257;SRP=30.8338;SRR=182;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:49:49,0:49:1946:0:0:0,-14.7505,-175.345 0/0:102:102,0:102:3984:0:0:0,-30.7051,-358.569 0/0:53:53,0:53:2109:0:0:0,-15.9546,-189.994 0/0:78:78,0:78:3021:0:0:0,-23.4803,-271.982 0/1:79:67,12:67:2594:12:470:-18.8665,0,-209.799 0/1:102:90,12:90:3484:12:485:-13.2962,0,-282.923 dDocent_Contig_4048 8 . A T 1452.29 . AB=0.162162;ABP=589.895;AC=4;AF=0.333333;AN=12;AO=110;CIGAR=1X;DP=978;DPB=978;DPRA=0;EPP=241.872;EPPR=1885.68;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4192;QR=33030;RO=867;RPL=0;RPP=241.872;RPPR=1885.68;RPR=110;RUN=1;SAF=110;SAP=241.872;SAR=0;SRF=867;SRP=1885.68;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:109:91,18:91:3466:18:697:-30.2519,0,-279.262 0/1:135:112,23:112:4299:23:863:-37.3463,0,-346.344 0/1:197:176,21:176:6739:21:817:-14.5521,0,-547.104 0/1:151:117,34:117:4440:34:1283:-70.3003,0,-354.218 0/0:234:231,3:231:8780:3:117:0,-59.5306,-779.063 0/0:152:140,11:140:5306:11:415:0,-7.88058,-439.869 dDocent_Contig_4049 50 . T C 65.2637 . AB=0.122807;ABP=73.4498;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=1X;DP=398;DPB=398;DPRA=1.60909;EPP=57.2971;EPPR=795.691;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.4;PAIREDR=0.729223;PAO=0;PQA=0;PQR=0;PRO=0;QA=975;QR=14523;RO=373;RPL=25;RPP=57.2971;RPPR=787.121;RPR=0;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=372;SRP=804.307;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:83:76,7:76:2898:7:268:0,-0.507,-236.476 0/0:83:80,3:80:3128:3:122:0,-13.613,-270.248 0/0:44:44,0:44:1718:0:0:0,-13.2453,-154.847 0/0:40:39,1:39:1532:1:40:0,-8.04552,-134.127 0/0:91:84,7:84:3301:7:269:0,-2.82367,-272.589 0/1:57:50,7:50:1946:7:276:-8.04902,0,-158.182 dDocent_Contig_4050 47 . G A 10327.8 . AB=0.403034;ABP=78.3907;AC=6;AF=0.5;AN=12;AO=372;CIGAR=1X1M1X;DP=923;DPB=925;DPRA=0;EPP=810.798;EPPR=1104.21;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.887097;PAIREDR=0.801147;PAO=0;PQA=0;PQR=0;PRO=0;QA=14607;QR=20324;RO=523;RPL=0;RPP=810.798;RPPR=1104.21;RPR=372;RUN=1;SAF=372;SAP=810.798;SAR=0;SRF=523;SRP=1138.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:132:97,34:97:3805:34:1326:-79.7658,0,-302.652 0|1:173:76,90:76:2953:90:3577:-271.608,0,-215.526 0|1:154:90,53:90:3506:53:2091:-144.966,0,-272.185 0|1:139:91,41:91:3469:41:1619:-105.816,0,-272.159 0|1:181:100,80:100:3901:80:3095:-224.052,0,-296.539 0|1:144:69,74:69:2690:74:2899:-217.797,0,-199.002 dDocent_Contig_4051 11 . C T 35897.1 . AB=0.432103;ABP=127.742;AC=6;AF=0.5;AN=12;AO=1346;CIGAR=1X;DP=3115;DPB=3115;DPRA=0;EPP=2925.81;EPPR=3840;GTI=0;LEN=1;MEANALT=1.33333;MQM=50.1924;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999434;PAO=0;PQA=0;PQR=0;PRO=0;QA=53759;QR=70554;RO=1767;RPL=0;RPP=2925.81;RPPR=3840;RPR=1346;RUN=1;SAF=1346;SAP=2925.81;SAR=0;SRF=1767;SRP=3840;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:465:266,199:266:10669:199:7948:-517.991,0,-819.498 0/1:497:356,141:356:14125:141:5627:-324.008,0,-1120.57 0/1:477:222,255:222:8888:255:10207:-712.317,0,-655.784 0/1:495:310,185:310:12336:185:7355:-437.896,0,-960.339 0/1:641:357,282:357:14290:282:11202:-761.561,0,-1092.25 0/1:540:256,284:256:10246:284:11420:-847.161,0,-758.892 dDocent_Contig_4052 50 . G A 973.5 . AB=0.118824;ABP=1075.73;AC=2;AF=0.166667;AN=12;AO=181;CIGAR=1X;DP=2588;DPB=2588;DPRA=1.11038;EPP=396.047;EPPR=5229.74;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7052;QR=95334;RO=2407;RPL=181;RPP=396.047;RPPR=5229.74;RPR=0;RUN=1;SAF=181;SAP=396.047;SAR=0;SRF=2407;SRP=5229.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:402:390,12:390:15460:12:454:0,-79.8144,-1349.03 0/0:497:461,36:461:18284:36:1376:0,-25.515,-1519.99 0/1:396:355,41:355:14064:41:1635:-28.1691,0,-1145.5 0/0:444:412,32:412:16419:32:1266:0,-19.445,-1362.21 0/1:454:394,60:394:15577:60:2321:-72.4028,0,-1264.1 0/0:395:395,0:395:15530:0:0:0,-118.907,-1396.55 dDocent_Contig_4053 35 . T A 218.448 . AB=0.103806;ABP=397.039;AC=2;AF=0.166667;AN=12;AO=45;CIGAR=6M1X2M;DP=979;DPB=969;DPRA=1.05513;EPP=100.727;EPPR=1955.16;GTI=0;LEN=1;MEANALT=2.8;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.996663;PAO=0;PQA=0;PQR=0;PRO=0;QA=1790;QR=35636;RO=899;RPL=0;RPP=100.727;RPPR=1955.16;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=899;SRP=1955.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:206:199,1,5:199:7902:1,5:41,193:0,-56.5181,-706.739,-44.0724,-691.191,-693.07 0|1:197:169,11,16:169:6676:11,16:436,641:-1.93573,-16.9233,-562.943,0,-513.446,-544.518 0|1:92:77,0,14:77:3041:0,14:0,564:-23.3093,-46.4886,-296.702,0,-250.215,-246 0|0:180:166,4,9:166:6535:4,9:164,351:0,-36.4204,-572.822,-21.0959,-545.18,-556.007 0|0:156:150,6,0:150:5997:6,0:239,0:0,-25.0759,-517.651,-45.1545,-519.457,-539.137 0|0:148:138,8,1:138:5485:8,1:321,41:0,-15.1007,-464.255,-38.1573,-463.28,-489.427 dDocent_Contig_4054 7 . C T 9964.6 . AB=0.214069;ABP=1638.44;AC=3;AF=0.25;AN=12;AO=624;CIGAR=1X;DP=4320;DPB=4320;DPRA=0;EPP=1358.01;EPPR=8022.26;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995126;PAO=0;PQA=0;PQR=0;PRO=0;QA=23822;QR=141866;RO=3693;RPL=0;RPP=1358.01;RPPR=8022.26;RPR=624;RUN=1;SAF=624;SAP=1358.01;SAR=0;SRF=3693;SRP=8022.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:641:590,51:590:22535:51:1957:0,-16.5895,-1850.53 0/0:615:562,52:562:21543:52:1958:0,-8.4731,-1761.21 0/1:434:395,39:395:15233:39:1498:-4.44732,0,-1239.56 0/0:761:733,28:733:28219:28:1077:0,-131.848,-2440.76 0/1:896:640,254:640:24619:254:9685:-602.075,0,-1945.01 0/1:973:773,200:773:29717:200:7647:-395.159,0,-2379.81 dDocent_Contig_4055 1 . N G 68.3772 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=72;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:72:-6.83664,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_4056 128 . N G 154.722 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=160;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:122:-11.3725,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:38:-3.79727,-0.30103,0 dDocent_Contig_4057 11 . A T 3907.43 . AB=0.576577;ABP=14.3176;AC=2;AF=0.166667;AN=12;AO=129;CIGAR=1X;DP=382;DPB=382;DPRA=2.6381;EPP=283.13;EPPR=552.393;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.992248;PAIREDR=0.956522;PAO=0;PQA=0;PQR=0;PRO=0;QA=5151;QR=10080;RO=253;RPL=0;RPP=283.13;RPPR=552.393;RPR=129;RUN=1;SAF=129;SAP=283.13;SAR=0;SRF=253;SRP=552.393;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:57:57,0:57:2261:0:0:0,-17.1587,-203.658 0/0:55:54,1:54:2154:1:34:0,-13.1577,-190.635 0/0:11:11,0:11:434:0:0:0,-3.31133,-39.4106 0/0:37:37,0:37:1491:0:0:0,-11.1381,-134.433 0/1:111:53,58:53:2113:58:2314:-175.005,0,-156.939 0/1:111:41,70:41:1627:70:2803:-218.959,0,-113.248 dDocent_Contig_4058 23 . C T 13489.1 . AB=0.213338;ABP=2100.76;AC=6;AF=0.5;AN=12;AO=627;CIGAR=1X;DP=2939;DPB=2939;DPRA=0;EPP=1364.52;EPPR=5006.08;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.987241;PAIREDR=0.992188;PAO=0;PQA=0;PQR=0;PRO=0;QA=24928;QR=91132;RO=2304;RPL=0;RPP=1364.52;RPPR=5006.08;RPR=627;RUN=1;SAF=627;SAP=1364.52;SAR=0;SRF=2304;SRP=5006.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:367:326,40:326:12833:40:1575:-31.3932,0,-1043.49 0/1:602:496,106:496:19678:106:4206:-197.288,0,-1588.18 0/1:495:431,63:431:17071:63:2513:-77.4868,0,-1386.23 0/1:458:362,96:362:14364:96:3835:-207.282,0,-1153.81 0/1:482:345,131:345:13613:131:5215:-325.545,0,-1080.53 0/1:535:344,191:344:13573:191:7584:-521.134,0,-1059.55 dDocent_Contig_4059 94 . A C 10691.2 . AB=0.573187;ABP=37.0201;AC=2;AF=0.166667;AN=12;AO=434;CIGAR=1X;DP=1305;DPB=1305;DPRA=1.13846;EPP=945.429;EPPR=1894.36;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0;PAIREDR=0.998852;PAO=0;PQA=0;PQR=0;PRO=0;QA=14869;QR=29899;RO=871;RPL=434;RPP=945.429;RPPR=1894.36;RPR=0;RUN=1;SAF=434;SAP=945.429;SAR=0;SRF=871;SRP=1894.36;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:195:195,0:195:6732:0:0:0,-58.7008,-605.978 0/0:99:98,1:98:3268:1:35:0,-26.3033,-290.854 0/0:124:117,7:117:4017:7:246:0,-14.8456,-339.245 0/0:156:149,7:149:5178:7:230:0,-25.9398,-445.161 0/1:494:155,339:155:5341:339:11578:-893.242,0,-332.136 0/1:237:157,80:157:5363:80:2780:-179.103,0,-411.475 dDocent_Contig_4060 14 . G C 2014.99 . AB=0.212254;ABP=331.672;AC=6;AF=0.5;AN=12;AO=97;CIGAR=1X;DP=457;DPB=457;DPRA=0;EPP=213.643;EPPR=784.74;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3870;QR=14275;RO=360;RPL=0;RPP=213.643;RPPR=784.74;RPR=97;RUN=1;SAF=97;SAP=213.643;SAR=0;SRF=360;SRP=784.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:63:53,10:53:2073:10:405:-17.8452,0,-167.789 0/1:91:66,25:66:2604:25:972:-60.3779,0,-207.111 0/1:72:60,12:60:2396:12:488:-22.5968,0,-194.12 0/1:70:58,12:58:2320:12:479:-22.3853,0,-187.891 0/1:72:58,14:58:2273:14:563:-29.3379,0,-183.068 0/1:89:65,24:65:2609:24:963:-60.1781,0,-208.133 dDocent_Contig_4061 9 . C A 1201.8 . AB=0.176322;ABP=364.279;AC=1;AF=0.0833333;AN=12;AO=74;CIGAR=1X;DP=1481;DPB=1481;DPRA=1.0095;EPP=163.699;EPPR=3056.1;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2834;QR=54230;RO=1406;RPL=0;RPP=163.699;RPPR=3056.1;RPR=74;RUN=1;SAF=74;SAP=163.699;SAR=0;SRF=1406;SRP=3056.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:145:145,0:145:5598:0:0:0,-43.6493,-503.784 0/0:140:137,3:137:5280:3:118:0,-31.1413,-464.187 0/0:90:90,0:90:3463:0:0:0,-27.0927,-311.797 0/0:207:206,1:206:7956:1:38:0,-58.5159,-712.028 0/0:502:501,0:501:19315:0:0:0,-150.816,-1736.88 0/1:397:327,70:327:12618:70:2678:-121.702,0,-1015.54 dDocent_Contig_4062 98 . N C 48362.1 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=1620;CIGAR=1X;DP=1622;DPB=1622;DPRA=0;EPP=3520.8;EPPR=0;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=53723;QR=0;RO=0;RPL=1620;RPP=3520.8;RPPR=0;RPR=0;RUN=1;SAF=1620;SAP=3520.8;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:345:0,344:0:0:344:11245:-1011.98,-103.554,0 1/1:460:0,460:0:0:460:15273:-1374.47,-138.474,0 1/1:371:0,370:0:0:370:12284:-1105.47,-111.381,0 1/1:305:0,305:0:0:305:10153:-913.8,-91.8142,0 1/1:81:0,81:0:0:81:2741:-246.945,-24.3834,0 1/1:60:0,60:0:0:60:2027:-182.705,-18.0618,0 dDocent_Contig_4063 98 . N A 581.934 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=23;CIGAR=1X;DP=24;DPB=24;DPRA=0;EPP=52.9542;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=4.33681e-19;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=623;QR=0;RO=0;RPL=23;RPP=52.9542;RPPR=0;RPR=0;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:27:-2.69978,-0.30103,0 1/1:7:0,7:0:0:7:216:-19.7421,-2.10721,0 1/1:5:0,5:0:0:5:59:-5.42786,-1.50515,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:6:0,6:0:0:6:186:-17.046,-1.80618,0 1/1:4:0,3:0:0:3:101:-9.09964,-0.90309,0 dDocent_Contig_4064 47 . G C 379.626 . AB=0.127273;ABP=334.851;AC=2;AF=0.166667;AN=12;AO=46;CIGAR=1X;DP=1217;DPB=1217;DPRA=0.683852;EPP=102.898;EPPR=2537.13;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997438;PAO=0;PQA=0;PQR=0;PRO=0;QA=1812;QR=45615;RO=1171;RPL=0;RPP=102.898;RPPR=2537.13;RPR=46;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=1171;SRP=2545.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:187:160,27:160:6196:27:1052:-38.666,0,-501.125 0/0:230:225,5:225:8774:5:201:0,-50.7664,-770.715 0/1:88:80,8:80:3099:8:318:-2.49598,0,-252.503 0/0:198:192,6:192:7450:6:241:0,-37.5376,-648.077 0/0:259:259,0:259:10246:0:0:0,-77.9668,-921.487 0/0:255:255,0:255:9850:0:0:0,-76.7626,-885.927 dDocent_Contig_4065 1 . N G 963.13 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=29;CIGAR=1X;DP=29;DPB=29;DPRA=0;EPP=19.8579;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0.241379;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1043;QR=0;RO=0;RPL=0;RPP=65.983;RPPR=0;RPR=29;RUN=1;SAF=7;SAP=19.8579;SAR=22;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:7:0,7:0:0:7:243:-22.2089,-2.10721,0 1/1:6:0,6:0:0:6:210:-19.2425,-1.80618,0 1/1:9:0,9:0:0:9:324:-29.502,-2.70927,0 1/1:5:0,5:0:0:5:196:-18.0131,-1.50515,0 ./.:.:.:.:.:.:.:. dDocent_Contig_4066 9 . C T 392.625 . AB=0.171975;ABP=149.744;AC=5;AF=0.416667;AN=12;AO=29;CIGAR=1X;DP=211;DPB=211;DPRA=0;EPP=65.983;EPPR=398.218;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.931034;PAIREDR=0.857143;PAO=0;PQA=0;PQR=0;PRO=0;QA=1097;QR=7019;RO=182;RPL=0;RPP=65.983;RPPR=398.218;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=182;SRP=398.218;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:31,3:31:1200:3:110:-0.0245924,0,-98.0612 0/1:30:19,11:19:724:11:427:-29.7542,0,-56.4591 0/1:30:27,3:27:1038:3:116:-1.7868,0,-84.697 0/1:44:38,6:38:1472:6:212:-6.1734,0,-119.509 0/0:54:52,2:52:2011:2:78:0,-8.85215,-173.821 0/1:19:15,4:15:574:4:154:-8.51389,0,-46.2827 dDocent_Contig_4067 39 . G A 152.939 . AB=0.105528;ABP=271.978;AC=1;AF=0.0833333;AN=12;AO=59;CIGAR=1X;DP=2667;DPB=2667;DPRA=0.891489;EPP=131.127;EPPR=5666.21;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.99885;PAO=0;PQA=0;PQR=0;PRO=0;QA=2370;QR=102884;RO=2608;RPL=0;RPP=131.127;RPPR=5666.21;RPR=59;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=2608;SRP=5666.21;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:422:388,34:388:15378:34:1365:0,-3.92773,-1259.77 0/0:445:445,0:445:17560:0:0:0,-133.958,-1579.03 0/1:199:178,21:178:7033:21:849:-16.8168,0,-572.751 0/0:393:393,0:393:15370:0:0:0,-118.305,-1382.2 0/0:572:572,0:572:22603:0:0:0,-172.189,-2032.4 0/0:636:632,4:632:24940:4:156:0,-177.039,-2228.12 dDocent_Contig_4068 9 . C T 1392.91 . AB=0.155556;ABP=652.232;AC=2;AF=0.166667;AN=12;AO=140;CIGAR=1X;DP=1621;DPB=1621;DPRA=1.49738;EPP=307.016;EPPR=3216.79;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994595;PAO=0;PQA=0;PQR=0;PRO=0;QA=5279;QR=56416;RO=1480;RPL=0;RPP=307.016;RPPR=3216.79;RPR=140;RUN=1;SAF=140;SAP=307.016;SAR=0;SRF=1480;SRP=3216.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:191:191,0:191:7280:0:0:0,-57.4967,-655.061 0/0:256:243,13:243:9213:13:476:0,-33.8871,-785.709 0/1:389:324,64:324:12370:64:2413:-100.2,0,-995.598 0/1:241:207,34:207:7921:34:1273:-42.3129,0,-640.139 0/0:242:235,7:235:8956:7:271:0,-48.0929,-781.028 0/0:302:280,22:280:10676:22:846:0,-14.4483,-883.995 dDocent_Contig_4069 42 . A C 229.99 . AB=0.5;ABP=3.0103;AC=7;AF=0.875;AN=8;AO=8;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=20.3821;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=1.0842e-19;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=243;QR=7;RO=1;RPL=0;RPP=20.3821;RPPR=5.18177;RPR=8;RUN=1;SAF=0;SAP=20.3821;SAR=8;SRF=0;SRP=5.18177;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 1/1:3:0,3:0:0:3:103:-9.61002,-0.90309,0 ./.:.:.:.:.:.:.:. 0/1:2:1,1:1:7:1:31:-2.49739,0,-0.0979383 1/1:3:0,3:0:0:3:77:-7.1855,-0.90309,0 ./.:.:.:.:.:.:.:. dDocent_Contig_4071 7 . C T 25081.2 . AB=0.229734;ABP=3681.54;AC=6;AF=0.5;AN=12;AO=1332;CIGAR=1X;DP=5798;DPB=5798;DPRA=0;EPP=2895.41;EPPR=9683.43;GTI=0;LEN=1;MEANALT=2;MQM=52.0901;MQMR=59.498;NS=6;NUMALT=1;ODDS=0;PAIRED=0.965465;PAIREDR=0.948632;PAO=0;PQA=0;PQR=0;PRO=0;QA=50632;QR=169772;RO=4458;RPL=0;RPP=2895.41;RPPR=9683.43;RPR=1332;RUN=1;SAF=1332;SAP=2895.41;SAR=0;SRF=4458;SRP=9683.43;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:891:714,174:714:27185:174:6635:-283.748,0,-2171.37 0/1:1222:960,262:960:36609:262:9957:-438.975,0,-2907.07 0/1:785:600,184:600:22755:184:6951:-344.107,0,-1805.25 0/1:1017:781,235:781:29848:235:8958:-452.219,0,-2365.89 0/1:972:740,230:740:28126:230:8762:-454.301,0,-2234.95 0/1:911:663,247:663:25249:247:9369:-545.991,0,-1994.69 dDocent_Contig_4072 36 . C T 294.803 . AB=0.120623;ABP=324.295;AC=4;AF=0.333333;AN=12;AO=32;CIGAR=1X;DP=391;DPB=391;DPRA=0.614583;EPP=72.4974;EPPR=782.569;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8125;PAIREDR=0.807799;PAO=0;PQA=0;PQR=0;PRO=0;QA=1276;QR=14375;RO=359;RPL=0;RPP=72.4974;RPPR=782.569;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=359;SRP=782.569;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:60:54,6:54:2163:6:244:-4.27703,0,-176.782 0/1:62:51,11:51:2061:11:428:-20.2029,0,-167.006 0/1:51:44,7:44:1744:7:280:-10.2187,0,-141.825 0/0:38:37,1:37:1478:1:40:0,-7.44346,-129.27 0/1:84:77,7:77:3087:7:284:-0.647268,0,-252.617 0/0:96:96,0:96:3842:0:0:0,-28.8989,-345.777 dDocent_Contig_4073 7 . C A 113.844 . AB=0.131868;ABP=110.128;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=1X;DP=650;DPB=650;DPRA=1.06214;EPP=57.2971;EPPR=1360.18;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.72;PAIREDR=0.7728;PAO=0;PQA=0;PQR=0;PRO=0;QA=916;QR=23962;RO=625;RPL=0;RPP=57.2971;RPPR=1360.18;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=625;SRP=1360.18;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:85:80,5:80:3081:5:192:0,-7.93754,-259.793 0/0:158:155,3:155:5901:3:87:0,-39.448,-522.923 0/0:92:90,2:90:3467:2:78:0,-20.2913,-304.756 0/1:91:79,12:79:3014:12:444:-12.9073,0,-244.027 0/0:103:103,0:103:3964:0:0:0,-31.0061,-356.85 0/0:121:118,3:118:4535:3:115:0,-25.6997,-397.477 dDocent_Contig_4074 15 . C T 65.7186 . AB=0.0949721;ABP=258.067;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=1X;DP=599;DPB=599;DPRA=1.36025;EPP=57.2971;EPPR=1247.26;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=991;QR=22782;RO=573;RPL=0;RPP=57.2971;RPPR=1247.26;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=573;SRP=1247.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:70:66,4:66:2588:4:150:0,-7.2084,-219.2 0/0:105:103,2:103:4083:2:74:0,-24.5841,-360.424 0/1:179:162,17:162:6468:17:685:-8.09474,0,-527.966 0/0:84:82,2:82:3296:2:82:0,-17.5068,-288.914 0/0:82:82,0:82:3232:0:0:0,-24.6845,-290.945 0/0:79:78,0:78:3115:0:0:0,-23.4803,-280.015 dDocent_Contig_4075 20 . T A 9192.72 . AB=0.175919;ABP=2533.63;AC=3;AF=0.25;AN=12;AO=581;CIGAR=1X;DP=5393;DPB=5393;DPRA=0;EPP=1264.64;EPPR=10447.8;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99605;PAO=0;PQA=0;PQR=0;PRO=0;QA=23247;QR=191558;RO=4810;RPL=0;RPP=1264.64;RPPR=10447.8;RPR=581;RUN=1;SAF=581;SAP=1264.64;SAR=0;SRF=4810;SRP=10447.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:876:845,31:845:33605:31:1252:0,-150.756,-2908.41 0/0:945:928,17:928:36955:17:659:0,-224.842,-3262.87 0/1:594:535,59:535:21424:59:2352:-33.0208,0,-1747.46 0/0:798:753,45:753:29917:45:1779:0,-79.8927,-2529.51 0/1:1274:982,292:982:39084:292:11691:-667.818,0,-3130.41 0/1:906:767,137:767:30573:137:5514:-223.655,0,-2476.36 dDocent_Contig_4076 20 . G T 228.906 . AB=0.130178;ABP=203.775;AC=4;AF=0.333333;AN=12;AO=22;CIGAR=1X;DP=259;DPB=259;DPRA=0.938889;EPP=50.7827;EPPR=517.649;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.954545;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=883;QR=9418;RO=237;RPL=0;RPP=50.7827;RPPR=517.649;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=237;SRP=517.649;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:30,5:30:1195:5:203:-8.11701,0,-97.2857 0/1:65:57,8:57:2287:8:320:-9.59913,0,-186.425 0/1:23:20,3:20:795:3:123:-4.5411,0,-64.9421 0/1:46:40,6:40:1569:6:237:-7.85504,0,-127.592 0/0:36:36,0:36:1424:0:0:0,-10.8371,-128.41 0/0:54:54,0:54:2148:0:0:0,-16.2556,-193.496 dDocent_Contig_4077 37 . T C 1568.35 . AB=0.140373;ABP=907.317;AC=3;AF=0.25;AN=12;AO=122;CIGAR=1X;DP=1360;DPB=1360;DPRA=1.28947;EPP=267.93;EPPR=2691.29;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4849;QR=49157;RO=1238;RPL=0;RPP=267.93;RPPR=2691.29;RPR=122;RUN=1;SAF=122;SAP=267.93;SAR=0;SRF=1238;SRP=2691.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:163:163,0:163:6455:0:0:0,-49.0679,-580.696 0/1:244:210,34:210:8351:34:1355:-48.7611,0,-677.688 0/0:175:166,9:166:6634:9:364:0,-19.5555,-563.639 0/0:217:217,0:217:8588:0:0:0,-65.3235,-772.449 0/1:160:139,21:139:5478:21:827:-26.5705,0,-444.686 0/1:401:343,58:343:13651:58:2303:-86.7248,0,-1106.85 dDocent_Contig_4078 13 . T C 48548.2 . AB=0.57757;ABP=114.855;AC=10;AF=0.833333;AN=12;AO=1236;CIGAR=1X5M1X;DP=2140;DPB=2140;DPRA=0;EPP=2686.95;EPPR=880.285;GTI=0;LEN=1;MEANALT=4.5;MQM=59.8981;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.998382;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=48538;QR=15640;RO=404;RPL=0;RPP=2686.95;RPPR=880.285;RPR=1236;RUN=1;SAF=1236;SAP=2686.95;SAR=0;SRF=404;SRP=880.285;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:270:38,92,135:38:1477:92,135:3529,5251:-588.263,-310.087,-403.764,-168.245,0,-248.979 1|1:355:32,109,214:32:1228:109,214:4174,8465:-928.663,-595.786,-663.764,-241.722,0,-278.094 1|1:164:21,61,80:21:828:61,80:2372,3148:-372.926,-190.81,-240.571,-120.31,0,-164.356 1|1:415:49,198,163:49:1903:198,163:7669,6418:-979.279,-371.241,-467.995,-466.431,0,-573.723 0|1:506:141,13,348:141:5450:13,348:504,13622:-1077.45,-1078.49,-1522.19,0,-406.204,-342.851 0|1:430:123,10,296:123:4754:10,296:392,11634:-919.459,-924.261,-1311.69,0,-358.213,-301.333 dDocent_Contig_4079 9 . C T 469.823 . AB=0.146552;ABP=128.881;AC=1;AF=0.0833333;AN=12;AO=24;CIGAR=1M1X12M;DP=345;DPB=343.286;DPRA=1.61579;EPP=55.1256;EPPR=595.822;GTI=0;LEN=1;MEANALT=4.2;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=0.75;PAIREDR=0.644689;PAO=0;PQA=0;PQR=0;PRO=0;QA=915;QR=10633;RO=273;RPL=0;RPP=55.1256;RPPR=595.822;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=273;SRP=595.822;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:50:47,0,0,0,2,0:47:1831:0,0,0,2,0:0,0,0,78,0:0,-14.1484,-164.634,-14.1484,-164.634,-164.634,-14.1484,-164.634,-164.634,-164.634,-7.74326,-158.222,-158.222,-158.222,-157.62,-14.1484,-164.634,-164.634,-164.634,-158.222,-164.634 0|0:63:55,4,0,0,3,0:55:2152:4,0,0,3,0:148,0,0,110,0:0,-4.45327,-180.197,-16.5566,-181.401,-193.507,-16.5566,-181.401,-193.507,-193.507,-7.57077,-172.413,-184.518,-184.518,-183.615,-16.5566,-181.401,-193.507,-193.507,-184.518,-193.507 0|0:38:34,0,2,1,0,0:34:1311:0,2,1,0,0:0,82,41,0,0:0,-10.235,-117.862,-3.46439,-111.093,-110.491,-6.85011,-114.478,-107.708,-114.177,-10.235,-117.862,-111.093,-114.478,-117.862,-10.235,-117.862,-111.093,-114.478,-117.862,-117.862 0|0:78:66,0,2,4,2,0:66:2557:0,2,4,2,0:0,33,152,78,0:0,-19.868,-229.948,-17.5368,-227.586,-226.984,-7.39036,-217.486,-215.125,-216.282,-13.4479,-223.536,-221.174,-211.074,-222.934,-19.868,-229.948,-227.586,-217.486,-223.536,-229.948 0|1:82:50,0,0,0,14,8:50:1959:0,0,0,14,8:0,0,0,533,314:-28.6669,-43.7184,-204.815,-43.7184,-204.815,-204.815,-43.7184,-204.815,-204.815,-204.815,0,-161.1,-161.1,-161.1,-156.886,-17.8929,-178.994,-178.994,-178.994,-135.279,-176.585 0|0:34:21,0,0,1,3,9:21:823:0,0,1,3,9:0,0,38,116,340:-21.5373,-27.8589,-95.5437,-27.8589,-95.5437,-95.5437,-24.7424,-92.4274,-92.4274,-92.1264,-18.3287,-86.0155,-86.0155,-82.8992,-85.1124,0,-67.6832,-67.6832,-64.5671,-58.1555,-64.9739 dDocent_Contig_4080 23 . G C 1070.9 . AB=0.120585;ABP=1029.58;AC=1;AF=0.0833333;AN=12;AO=151;CIGAR=1X;DP=3382;DPB=3382;DPRA=1.27043;EPP=330.903;EPPR=7006.01;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.84887;PAO=0;PQA=0;PQR=0;PRO=0;QA=6030;QR=127281;RO=3229;RPL=0;RPP=330.903;RPPR=7014.69;RPR=151;RUN=1;SAF=151;SAP=330.903;SAR=0;SRF=3228;SRP=7006.01;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:528:515,13:515:20253:13:532:0,-110.718,-1772.99 0/1:821:722,99:722:28458:99:3953:-108.613,0,-2311.72 0/0:518:490,27:490:19315:27:1063:0,-59.9492,-1640.91 0/0:631:622,9:622:24449:9:359:0,-157.278,-2165.78 0/0:460:460,0:460:18227:0:0:0,-138.474,-1639.01 0/0:424:420,3:420:16579:3:123:0,-116.273,-1479.4 dDocent_Contig_4081 107 . N T 38.0033 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=40;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:40:-3.79918,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_4082 8 . A T 810.589 . AB=0.355556;ABP=19.3205;AC=2;AF=0.166667;AN=12;AO=33;CIGAR=1X;DP=266;DPB=266;DPRA=1.48598;EPP=74.6689;EPPR=508.963;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.787879;PAIREDR=0.592275;PAO=0;PQA=0;PQR=0;PRO=0;QA=1269;QR=8897;RO=233;RPL=0;RPP=74.6689;RPPR=508.963;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=233;SRP=508.963;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1271:0:0:0,-9.93399,-114.681 0/0:69:68,1:68:2586:1:39:0,-16.8745,-229.045 0/0:24:24,0:24:911:0:0:0,-7.22472,-82.3076 0/0:50:50,0:50:1902:0:0:0,-15.0515,-171.426 0/1:38:30,8:30:1147:8:302:-16.0976,0,-92.0891 0/1:52:28,24:28:1080:24:928:-68.1831,0,-81.8518 dDocent_Contig_4083 22 . A T 17438.8 . AB=0.752033;ABP=410.188;AC=5;AF=0.416667;AN=12;AO=555;CIGAR=1X;DP=745;DPB=745;DPRA=21.0857;EPP=1208.18;EPPR=415.59;GTI=0;LEN=1;MEANALT=1;MQM=59.9748;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.996396;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=21951;QR=7495;RO=190;RPL=0;RPP=1208.18;RPPR=415.59;RPR=555;RUN=1;SAF=555;SAP=1208.18;SAR=0;SRF=190;SRP=415.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:165:43,122:43:1690:122:4797:-381.947,0,-102.649 0/1:192:72,120:72:2847:120:4769:-371.32,0,-198.544 0/1:175:17,158:17:647:158:6193:-504.45,0,-5.86515 0/1:110:12,98:12:465:98:3905:-318.319,0,-9.07774 0/1:96:39,57:39:1571:57:2287:-177.067,0,-112.725 0/0:7:7,0:7:275:0:0:0,-2.10721,-25.1164 dDocent_Contig_4084 60 . A G 1520.13 . AB=0.126943;ABP=469.618;AC=3;AF=0.25;AN=12;AO=52;CIGAR=1X2M1X;DP=964;DPB=964;DPRA=0;EPP=115.927;EPPR=1644.64;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1852;QR=28863;RO=756;RPL=52;RPP=115.927;RPPR=1644.64;RPR=0;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=756;SRP=1644.64;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:120:96,22,0,2:96:3678:22,0,2:775,0,72:-34.18,0,-295.238,-63.0788,-301.861,-364.941,-57.2037,-295.987,-359.067,-358.465 0|1:126:103,14,1,8:103:3934:14,1,8:522,38,325:-11.7085,0,-318.527,-39.5983,-319.625,-362.056,-15.8982,-295.934,-335.55,-336.258 0|0:96:86,3,1,4:86:3270:3,1,4:113,40,153:0,-16.6325,-283.882,-22.592,-281.49,-290.448,-13.3381,-272.232,-278.197,-280.288 0|1:140:116,13,4,4:116:4442:13,4,4:442,160,157:-0.897632,0,-360.593,-22.6296,-351.325,-385.961,-22.899,-351.593,-374.253,-386.229 0|0:295:212,0,37,46:212:8065:0,37,46:0,1417,1802:-84.3434,-148.162,-809.566,-31.9054,-693.305,-682.167,0,-661.407,-545.147,-647.56 0|0:187:143,0,20,22:143:5474:0,20,22:0,787,875:-28.9976,-72.0449,-521.227,-7.31569,-456.495,-450.474,0,-449.182,-384.45,-442.56 dDocent_Contig_4085 98 . N A 219.972 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=7;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=230;QR=0;RO=0;RPL=7;RPP=18.2106;RPPR=0;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:5:0,4:0:0:4:138:-12.6355,-1.20412,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:63:-5.98364,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_4086 12 . T G 4554.53 . AB=0.414508;ABP=27.5153;AC=1;AF=0.0833333;AN=12;AO=160;CIGAR=1X;DP=1384;DPB=1384;DPRA=1.93387;EPP=350.446;EPPR=2654.38;GTI=0;LEN=1;MEANALT=2;MQM=59.775;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.975;PAIREDR=0.958231;PAO=0;PQA=0;PQR=0;PRO=0;QA=6373;QR=48542;RO=1221;RPL=0;RPP=350.446;RPPR=2654.38;RPR=160;RUN=1;SAF=160;SAP=350.446;SAR=0;SRF=1221;SRP=2654.38;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:170:170,0:170:6736:0:0:0,-51.1751,-605.963 0/0:190:190,0:190:7527:0:0:0,-57.1957,-677.086 0/0:219:219,0:219:8748:0:0:0,-65.9256,-786.825 0/0:172:170,0:170:6767:0:0:0,-51.1751,-608.337 0/1:386:225,160:225:8938:160:6373:-456.976,0,-687.681 0/0:247:247,0:247:9826:0:0:0,-74.3544,-883.748 dDocent_Contig_4087 136 . N G 112.807 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=121;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:121:-11.2802,-0.90309,0 dDocent_Contig_4088 12 . G C 254.184 . AB=0.12037;ABP=273.399;AC=2;AF=0.166667;AN=12;AO=32;CIGAR=1X;DP=768;DPB=768;DPRA=0.632743;EPP=72.4974;EPPR=1599.04;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.96875;PAIREDR=0.985034;PAO=0;PQA=0;PQR=0;PRO=0;QA=1275;QR=29358;RO=735;RPL=0;RPP=72.4974;RPPR=1599.04;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=735;SRP=1599.04;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:101:97,4:97:3884:4:161:0,-15.5291,-334.678 0/1:141:126,15:126:5009:15:591:-11.0821,0,-408.247 0/1:75:64,11:64:2570:11:442:-17.5582,0,-208.854 0/0:112:110,2:110:4395:2:81:0,-26.0296,-387.796 0/0:167:167,0:167:6672:0:0:0,-50.272,-600.182 0/0:172:171,0:171:6828:0:0:0,-51.4761,-613.791 dDocent_Contig_4089 98 . N A 3199.26 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=104;CIGAR=1X;DP=104;DPB=104;DPRA=0;EPP=228.843;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3530;QR=0;RO=0;RPL=104;RPP=228.843;RPPR=0;RPR=0;RUN=1;SAF=104;SAP=228.843;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:15:0,15:0:0:15:530:-48.0316,-4.51545,0 1/1:20:0,20:0:0:20:667:-60.3423,-6.0206,0 1/1:12:0,12:0:0:12:420:-38.1347,-3.61236,0 1/1:55:0,55:0:0:55:1858:-167.495,-16.5567,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:55:-5.22333,-0.60206,0 dDocent_Contig_4090 118 . A G 4678.6 . AB=0.482234;ABP=4.09052;AC=6;AF=0.5;AN=12;AO=190;CIGAR=1X;DP=394;DPB=394;DPRA=0;EPP=415.59;EPPR=443.819;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.926316;PAIREDR=0.916256;PAO=0;PQA=0;PQR=0;PRO=0;QA=6621;QR=7058;RO=203;RPL=0;RPP=415.59;RPPR=443.819;RPR=190;RUN=1;SAF=0;SAP=415.59;SAR=190;SRF=0;SRP=443.819;SRR=203;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:88:45,42:45:1563:42:1472:-106.244,0,-114.43 0/1:79:44,35:44:1526:35:1216:-85.9594,0,-113.847 0/1:62:25,37:25:866:37:1285:-97.2849,0,-59.5879 0/1:62:30,32:30:1068:32:1113:-81.8128,0,-77.7689 0/1:43:21,22:21:719:22:750:-54.8678,0,-52.0825 0/1:60:38,22:38:1316:22:785:-52.9128,0,-100.673 dDocent_Contig_4091 7 . C T 1021.41 . AB=0.117476;ABP=1312.1;AC=2;AF=0.166667;AN=12;AO=129;CIGAR=1X;DP=3855;DPB=3855;DPRA=0.771438;EPP=283.13;EPPR=8083.06;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=59.9989;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999194;PAO=0;PQA=0;PQR=0;PRO=0;QA=4893;QR=141946;RO=3721;RPL=0;RPP=283.13;RPPR=8083.06;RPR=129;RUN=1;SAF=129;SAP=283.13;SAR=0;SRF=3721;SRP=8083.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:778:771,7:771:29379:7:264:0,-210.083,-2618.28 0/0:825:824,0:824:31457:0:0:0,-248.049,-2829.1 0/0:531:527,1:527:20023:1:17:0,-157.438,-1799.25 0/0:691:691,0:691:26394:0:0:0,-208.012,-2373.95 0/1:597:516,80:516:19750:80:3030:-93.061,0,-1596.65 0/1:433:392,41:392:14943:41:1582:-12.3024,0,-1213.84 dDocent_Contig_4093 66 . G C 5577.69 . AB=0.302041;ABP=253.191;AC=6;AF=0.5;AN=12;AO=222;CIGAR=1X;DP=735;DPB=735;DPRA=0;EPP=485.077;EPPR=1116.98;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.927928;PAIREDR=0.966862;PAO=0;PQA=0;PQR=0;PRO=0;QA=8764;QR=20215;RO=513;RPL=222;RPP=485.077;RPPR=1116.98;RPR=0;RUN=1;SAF=222;SAP=485.077;SAR=0;SRF=513;SRP=1116.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:117:80,37:80:3192:37:1448:-95.3507,0,-252.131 0/1:215:168,47:168:6578:47:1852:-102.166,0,-527.06 0/1:89:64,25:64:2525:25:992:-62.7834,0,-200.603 0/1:108:65,43:65:2570:43:1701:-120.804,0,-198.925 0/1:80:40,40:40:1583:40:1566:-117.092,0,-118.63 0/1:126:96,30:96:3767:30:1205:-70.7945,0,-301.127 dDocent_Contig_4094 106 . N T 93.3124 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=2X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=100;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:3:0,3:0:0:3:100:-9.3307,-0.90309,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_4095 30 . C T 6716.17 . AB=0.127749;ABP=5147.24;AC=5;AF=0.416667;AN=12;AO=596;CIGAR=1X;DP=5052;DPB=5052;DPRA=0;EPP=1297.21;EPPR=9620.46;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.548658;PAIREDR=0.741928;PAO=0;PQA=0;PQR=0;PRO=0;QA=23780;QR=177070;RO=4429;RPL=0;RPP=1297.21;RPPR=9620.46;RPR=596;RUN=1;SAF=596;SAP=1297.21;SAR=0;SRF=4429;SRP=9620.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:767:678,85:678:27034:85:3376:-73.8126,0,-2200.54 0/1:1124:929,178:929:37156:178:7151:-309.584,0,-3006.91 0/1:784:660,121:660:26330:121:4827:-198.816,0,-2131.83 0/1:854:755,96:755:30221:96:3792:-84.7272,0,-2460.55 0/1:745:679,66:679:27090:66:2645:-13.8989,0,-2211.39 0/0:778:728,50:728:29239:50:1989:0,-55.0063,-2449.6 dDocent_Contig_4096 16 . A G 4272.71 . AB=0.364679;ABP=72.358;AC=6;AF=0.5;AN=12;AO=159;CIGAR=1X;DP=436;DPB=436;DPRA=0;EPP=348.274;EPPR=604.508;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.993711;PAIREDR=0.99639;PAO=0;PQA=0;PQR=0;PRO=0;QA=6311;QR=11032;RO=277;RPL=0;RPP=348.274;RPPR=604.508;RPR=159;RUN=1;SAF=159;SAP=348.274;SAR=0;SRF=277;SRP=604.508;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:87:51,36:51:2047:36:1417:-101.598,0,-158.221 0/1:103:48,55:48:1927:55:2194:-166.628,0,-142.623 0/1:65:49,16:49:1968:16:645:-38.8166,0,-157.746 0/1:111:74,37:74:2925:37:1442:-96.6085,0,-229.937 0/1:16:11,5:11:445:5:203:-13.8366,0,-35.5896 0/1:54:44,10:44:1720:10:410:-21.0049,0,-138.763 dDocent_Contig_4098 19 . G A 237.546 . AB=0.206897;ABP=46.29;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=304;DPB=304;DPRA=1.17886;EPP=29.068;EPPR=637.08;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=471;QR=11734;RO=292;RPL=0;RPP=29.068;RPPR=637.08;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=292;SRP=637.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:38,0:38:1534:0:0:0,-11.4391,-138.297 0/0:83:83,0:83:3325:0:0:0,-24.9855,-299.298 0/0:48:48,0:48:1926:0:0:0,-14.4494,-173.537 0/1:58:46,12:46:1849:12:471:-25.2775,0,-149.155 0/0:32:32,0:32:1301:0:0:0,-9.63296,-117.35 0/0:45:45,0:45:1799:0:0:0,-13.5463,-162.12 dDocent_Contig_4099 21 . T A 233.624 . AB=0.109966;ABP=387.525;AC=2;AF=0.166667;AN=12;AO=35;CIGAR=1X;DP=1139;DPB=1139;DPRA=1.05225;EPP=79.0118;EPPR=2395.97;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.881125;PAO=0;PQA=0;PQR=0;PRO=0;QA=1381;QR=44041;RO=1102;RPL=0;RPP=79.0118;RPPR=2395.97;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=1102;SRP=2395.97;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:151:151,0:151:6047:0:0:0,-45.4555,-543.988 0/0:217:216,0:216:8579:0:0:0,-65.0225,-771.212 0/0:293:290,3:290:11676:3:120:0,-77.0139,-1038.8 0/0:187:187,0:187:7466:0:0:0,-56.2926,-671.555 0/1:168:151,16:151:6008:16:637:-7.12215,0,-489.959 0/1:123:107,16:107:4265:16:624:-19.4621,0,-346.774 dDocent_Contig_4100 18 . C T 228.134 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=2;CIGAR=1X3M1X;DP=582;DPB=582;DPRA=0.357798;EPP=7.35324;EPPR=1175.61;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.957407;PAO=0;PQA=0;PQR=0;PRO=0;QA=79;QR=20551;RO=540;RPL=0;RPP=7.35324;RPPR=1175.61;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=540;SRP=1175.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:86:81,0,3:81:3055:0,3:0,123:0,-24.3834,-274.701,-14.2282,-264.548,-263.644 0|0:115:111,0,1:111:4221:0,1:0,36:0,-33.4143,-379.65,-30.4611,-376.713,-376.412 0|0:39:35,2,2:35:1345:2,2:79,79:0,-4.03509,-113.831,-4.03509,-107.932,-113.831 0|0:126:123,0,3:123:4657:0,3:0,120:0,-37.0267,-418.778,-26.7421,-408.892,-407.989 0|0:116:102,0,13:102:3928:0,13:0,519:-12.3175,-43.0226,-365.544,0,-322.797,-318.883 0|0:100:88,0,12:88:3345:0,12:0,483:-13.7177,-40.2083,-314.5,0,-274.691,-271.079 dDocent_Contig_4101 84 . C A 252.125 . AB=0.177966;ABP=109.302;AC=4;AF=0.333333;AN=12;AO=26;CIGAR=1X;DP=226;DPB=226;DPRA=0;EPP=59.4686;EPPR=437.305;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.49;PAO=0;PQA=0;PQR=0;PRO=0;QA=919;QR=7046;RO=200;RPL=26;RPP=59.4686;RPPR=437.305;RPR=0;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=200;SRP=437.305;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:27:23,4:23:777:4:141:-4.90922,0,-62.1101 0/0:74:72,2:72:2553:2:72:0,-15.4395,-223.186 0/1:31:27,4:27:968:4:135:-3.15145,0,-78.1045 0/0:34:31,3:31:1100:3:108:0,-0.15985,-89.2358 0/1:16:14,2:14:475:2:72:-2.02024,0,-38.255 0/1:44:33,11:33:1173:11:391:-22.2844,0,-92.6325 dDocent_Contig_4102 8 . A C 380.838 . AB=0.137778;ABP=259.427;AC=1;AF=0.0833333;AN=12;AO=70;CIGAR=1X;DP=1218;DPB=1218;DPRA=0.909722;EPP=155.013;EPPR=2493.69;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992153;PAO=0;PQA=0;PQR=0;PRO=0;QA=2690;QR=43797;RO=1147;RPL=0;RPP=155.013;RPPR=2493.69;RPR=70;RUN=1;SAF=70;SAP=155.013;SAR=0;SRF=1147;SRP=2493.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:225:194,31:194:7383:31:1186:-39.3057,0,-596.594 0/0:229:214,15:214:8202:15:578:0,-16.5736,-685.607 0/0:127:119,8:119:4577:8:310:0,-9.9671,-383.713 0/0:205:188,16:188:7185:16:616:0,-6.00143,-590.743 0/0:222:222,0:222:8449:0:0:0,-66.8287,-760.189 0/0:210:210,0:210:8001:0:0:0,-63.2163,-719.905 dDocent_Contig_4103 13 . G A 284.493 . AB=0.11215;ABP=422.429;AC=3;AF=0.25;AN=12;AO=38;CIGAR=1X;DP=570;DPB=570;DPRA=1.38742;EPP=85.5263;EPPR=1158.23;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994361;PAO=0;PQA=0;PQR=0;PRO=0;QA=1499;QR=21193;RO=532;RPL=0;RPP=85.5263;RPPR=1158.23;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=532;SRP=1158.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:83:83,0:83:3302:0:0:0,-24.9855,-297.233 0/1:160:142,18:142:5609:18:712:-16.2362,0,-456.478 0/1:70:64,6:64:2587:6:234:-0.354538,0,-211.879 0/1:91:79,12:79:3163:12:472:-15.4333,0,-257.347 0/0:68:68,0:68:2706:0:0:0,-20.47,-243.666 0/0:98:96,2:96:3826:2:81:0,-21.8152,-336.659 dDocent_Contig_4104 26 . T A 740.423 . AB=0.116883;ABP=886.518;AC=3;AF=0.25;AN=12;AO=94;CIGAR=1X;DP=1259;DPB=1259;DPRA=1.05817;EPP=207.129;EPPR=2530.6;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3701;QR=46283;RO=1164;RPL=0;RPP=207.129;RPPR=2530.6;RPR=94;RUN=1;SAF=94;SAP=207.129;SAR=0;SRF=1164;SRP=2530.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:177:154,23:154:6109:23:901:-28.111,0,-496.293 0/1:276:248,28:248:9899:28:1102:-16.3868,0,-807.202 0/0:162:149,13:149:5951:13:512:0,-2.34096,-488.936 0/1:240:210,30:210:8366:30:1186:-34.7663,0,-680.23 0/0:146:146,0:146:5760:0:0:0,-43.9504,-518.209 0/0:258:257,0:257:10198:0:0:0,-77.3647,-916.768 dDocent_Contig_4105 44 . G A 208.058 . AB=0.125;ABP=198.443;AC=3;AF=0.25;AN=12;AO=20;CIGAR=1X;DP=311;DPB=311;DPRA=1.0596;EPP=46.4397;EPPR=634.909;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.95;PAIREDR=0.652921;PAO=0;PQA=0;PQR=0;PRO=0;QA=793;QR=11376;RO=291;RPL=0;RPP=46.4397;RPPR=634.909;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=291;SRP=634.909;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:49:42,7:42:1636:7:271:-10.0034,0,-132.736 0/1:50:42,8:42:1648:8:319:-14.0228,0,-133.508 0/0:50:50,0:50:1937:0:0:0,-15.0515,-174.541 0/1:61:56,5:56:2168:5:203:-0.290226,0,-176.94 0/0:52:52,0:52:2041:0:0:0,-15.6536,-183.877 0/0:49:49,0:49:1946:0:0:0,-14.7505,-175.341 dDocent_Contig_4106 25 . A C 358.646 . AB=0.0111111;ABP=376.697;AC=0;AF=0;AN=12;AO=17;CIGAR=11M4I3M1X;DP=1456;DPB=1470.93;DPRA=0.543002;EPP=39.9253;EPPR=2582.72;GTI=0;LEN=1;MEANALT=9.33333;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.995791;PAO=0;PQA=0;PQR=0;PRO=0;QA=669;QR=46783;RO=1188;RPL=0;RPP=39.9253;RPPR=2582.72;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=1188;SRP=2582.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:187:149,9,6,4,9:149:5868:9,6,4,9:356,221,148,349:0,-15.5464,-495.59,-26.7858,-480.233,-507.725,-32.7489,-486.196,-497.427,-514.29,-16.1781,-469.63,-480.862,-486.825,-496.22 0|0:238:202,0,9,5,14:202:7974:0,9,5,14:0,352,189,515:0,-60.8081,-716.961,-31.858,-688.022,-685.312,-45.3191,-701.475,-672.536,-699.97,-18.7039,-674.863,-645.924,-659.378,-670.649 0|0:116:88,6,4,4,7:88:3452:6,4,4,7:236,139,163,280:0,-7.06901,-289.173,-15.2009,-279.688,-297.898,-13.0358,-277.531,-285.654,-295.74,-3.41316,-267.913,-276.036,-273.878,-285.219 0|0:180:133,2,4,15,10:133:5233:2,4,15,10:77,148,587,354:-8.22815,-41.9427,-471.813,-36.1613,-460.311,-465.429,0,-424.156,-418.374,-425.963,-19.4444,-443.59,-437.808,-401.654,-446.902 0|0:355:299,0,26,27,0:299:11789:0,26,27,0:0,1023,1056,0:0,-90.008,-1059.94,-5.85474,-975.797,-967.971,-3.19288,-973.134,-888.987,-965.006,-90.008,-1059.94,-975.797,-973.134,-1059.94 0|0:380:317,0,39,19,0:317:12467:0,39,19,0:0,1535,757,0:-30.8583,-126.285,-1151.76,0,-1025.49,-1013.75,-63.941,-1089.42,-963.157,-1083.7,-126.285,-1151.76,-1025.49,-1089.42,-1151.76 dDocent_Contig_4107 10 . A T 874.305 . AB=0.261146;ABP=80.8099;AC=5;AF=0.416667;AN=12;AO=47;CIGAR=1X1M2X;DP=251;DPB=251;DPRA=0;EPP=105.07;EPPR=443.819;GTI=0;LEN=1;MEANALT=1.16667;MQM=48.5319;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1847;QR=8010;RO=203;RPL=0;RPP=105.07;RPPR=443.819;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=203;SRP=443.819;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:24:13,11:13:522:11:439:-31.964,0,-40.1028 0|0:94:87,6:87:3450:6:239:0,-6.64623,-288.912 0|1:17:14,3:14:551:3:121:-6.07523,0,-44.8124 0|1:43:36,7:36:1420:7:260:-10.3394,0,-115.117 0|1:26:13,13:13:512:13:509:-37.2864,0,-38.6006 0|1:47:40,7:40:1555:7:279:-10.9873,0,-126.049 dDocent_Contig_4108 11 . C T 396.549 . AB=0.103393;ABP=848.73;AC=2;AF=0.166667;AN=12;AO=94;CIGAR=1X;DP=1890;DPB=1890;DPRA=0.787466;EPP=207.129;EPPR=3900.8;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.989415;PAO=0;PQA=0;PQR=0;PRO=0;QA=3748;QR=72283;RO=1795;RPL=0;RPP=207.129;RPPR=3900.8;RPR=94;RUN=1;SAF=94;SAP=207.129;SAR=0;SRF=1795;SRP=3900.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:285:257,27:257:10326:27:1083:-11.8618,0,-842.737 0/0:355:336,19:336:13513:19:762:0,-37.964,-1146.21 0/0:182:171,11:171:6890:11:444:0,-14.4728,-579.434 0/1:334:297,37:297:11963:37:1459:-31.0149,0,-975.219 0/0:395:395,0:395:15919:0:0:0,-118.907,-1431.39 0/0:339:339,0:339:13672:0:0:0,-102.049,-1229.39 dDocent_Contig_4109 98 . N T 682.359 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=23;CIGAR=1X;DP=24;DPB=24;DPRA=0;EPP=52.9542;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=732;QR=0;RO=0;RPL=23;RPP=52.9542;RPPR=0;RPR=0;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:6:0,5:0:0:5:151:-13.5622,-1.50515,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:3:0,3:0:0:3:93:-8.67736,-0.90309,0 1/1:5:0,5:0:0:5:165:-15.1754,-1.50515,0 1/1:4:0,4:0:0:4:115:-10.6346,-1.20412,0 1/1:4:0,4:0:0:4:138:-12.7604,-1.20412,0 dDocent_Contig_4111 10 . A C 59618.2 . AB=0.744732;ABP=1311.39;AC=6;AF=0.5;AN=12;AO=1873;CIGAR=1X;DP=2515;DPB=2515;DPRA=0;EPP=4070.18;EPPR=1388.41;GTI=0;LEN=1;MEANALT=1.5;MQM=59.9904;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998398;PAIREDR=0.99373;PAO=0;PQA=0;PQR=0;PRO=0;QA=74842;QR=25526;RO=638;RPL=0;RPP=4070.18;RPPR=1388.41;RPR=1873;RUN=1;SAF=1873;SAP=4070.18;SAR=0;SRF=638;SRP=1388.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:466:82,382:82:3247:382:15226:-1229.06,0,-152.224 0/1:485:99,386:99:3940:386:15387:-1237.63,0,-208.584 0/1:396:55,340:55:2228:340:13559:-1100.01,0,-81.3907 0/1:391:83,307:83:3344:307:12308:-989.037,0,-183.22 0/1:455:154,301:154:6167:301:12042:-945.721,0,-417.807 0/1:322:165,157:165:6600:157:6320:-471.591,0,-496.769 dDocent_Contig_4112 39 . G A 3450.14 . AB=0.218878;ABP=504.799;AC=5;AF=0.416667;AN=12;AO=165;CIGAR=1X;DP=905;DPB=905;DPRA=0;EPP=361.303;EPPR=1609.9;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.981818;PAIREDR=0.964865;PAO=0;PQA=0;PQR=0;PRO=0;QA=6569;QR=29434;RO=740;RPL=0;RPP=361.303;RPPR=1609.9;RPR=165;RUN=1;SAF=165;SAP=361.303;SAR=0;SRF=740;SRP=1609.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:129:88,41:88:3516:41:1638:-108.82,0,-277.645 0/1:168:145,23:145:5693:23:922:-32.712,0,-461.617 0/1:121:93,28:93:3702:28:1132:-65.7369,0,-296.771 0/1:155:116,39:116:4625:39:1543:-92.4528,0,-369.498 0/0:174:169,5:169:6754:5:203:0,-33.7262,-588.894 0/1:158:129,29:129:5144:29:1131:-54.5141,0,-415.254 dDocent_Contig_4113 54 . A G 1687.62 . AB=0.300813;ABP=87.786;AC=5;AF=0.416667;AN=12;AO=74;CIGAR=1X;DP=274;DPB=274;DPRA=1.75714;EPP=163.699;EPPR=437.305;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.635135;PAIREDR=0.595;PAO=0;PQA=0;PQR=0;PRO=0;QA=2782;QR=7650;RO=200;RPL=74;RPP=163.699;RPPR=437.305;RPR=0;RUN=1;SAF=74;SAP=163.699;SAR=0;SRF=200;SRP=437.305;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1066:0:0:0,-8.42884,-96.239 0/1:50:31,19:31:1176:19:705:-48.7155,0,-91.071 0/1:43:23,20:23:881:20:794:-58.8364,0,-66.6514 0/1:49:32,17:32:1234:17:615:-40.9161,0,-96.5954 0/1:49:43,6:43:1669:6:241:-7.31583,0,-135.703 0/1:55:43,12:43:1624:12:427:-22.2,0,-129.858 dDocent_Contig_4114 49 . T C 164.172 . AB=0.105263;ABP=285.873;AC=1;AF=0.0833333;AN=12;AO=29;CIGAR=1X;DP=779;DPB=779;DPRA=2.56891;EPP=65.983;EPPR=1631.61;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993333;PAO=0;PQA=0;PQR=0;PRO=0;QA=1171;QR=29735;RO=750;RPL=0;RPP=65.983;RPPR=1631.61;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=750;SRP=1631.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:95:95,0:95:3780:0:0:0,-28.5978,-340.204 0/0:82:82,0:82:3222:0:0:0,-24.6845,-290.057 0/0:92:92,0:92:3663:0:0:0,-27.6948,-329.68 0/0:72:72,0:72:2898:0:0:0,-21.6742,-260.909 0/0:229:222,7:222:8786:7:276:0,-43.7291,-765.045 0/1:209:187,22:187:7386:22:895:-17.9401,0,-601.479 dDocent_Contig_4115 1 . N A 592.736 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=17;CIGAR=1X;DP=17;DPB=17;DPRA=0;EPP=39.9253;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=59.5882;MQMR=0;NS=1;NUMALT=1;ODDS=16.3887;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=655;QR=0;RO=0;RPL=0;RPP=39.9253;RPPR=0;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:17:0,17:0:0:17:655:-59.2736,-5.11751,0 dDocent_Contig_4116 43 . A G 187.529 . AB=0.134328;ABP=158.643;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=390;DPB=390;DPRA=2.61719;EPP=42.0968;EPPR=810.798;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=670;QR=14753;RO=372;RPL=0;RPP=42.0968;RPPR=810.798;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=372;SRP=810.798;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1397:0:0:0,-10.536,-125.986 0/0:108:108,0:108:4294:0:0:0,-32.5112,-386.416 0/0:25:25,0:25:999:0:0:0,-7.52575,-90.2042 0/0:62:62,0:62:2461:0:0:0,-18.6639,-221.632 0/1:134:116,18:116:4627:18:670:-20.2758,0,-376.017 0/0:26:26,0:26:975:0:0:0,-7.82678,-88.0333 dDocent_Contig_4117 98 . N A 213.147 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=219;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:49:-4.57269,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:93:-8.67784,-0.90309,0 dDocent_Contig_4118 13 . C A 515.302 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=1X3M;DP=496;DPB=496;DPRA=1.15278;EPP=18.2106;EPPR=997.545;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.941048;PAO=0;PQA=0;PQR=0;PRO=0;QA=279;QR=18085;RO=458;RPL=0;RPP=18.2106;RPPR=997.545;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=458;SRP=997.545;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:67:67,0,0:67:2651:0,0:0,0:0,-20.169,-238.729,-20.169,-238.729,-238.729 0|0:80:79,0,1:79:3138:0,1:0,36:0,-23.7814,-282.145,-20.4841,-279.208,-278.907 0|0:77:77,0,0:77:3041:0,0:0,0:0,-23.1793,-273.786,-23.1793,-273.786,-273.786 0|0:86:80,0,6:80:3155:0,6:0,243:0,-24.0824,-283.636,-3.64098,-263.599,-261.793 0|1:76:63,13,0:63:2494:13,0:517,0:-23.9994,0,-201.737,-42.9643,-205.651,-248.218 0|1:110:92,18,0:92:3606:18,0:706,0:-30.7526,0,-291.483,-58.4474,-296.902,-354.957 dDocent_Contig_4119 74 . C T 310.817 . AB=0.186992;ABP=107.682;AC=2;AF=0.166667;AN=12;AO=27;CIGAR=1X;DP=297;DPB=297;DPRA=1.65179;EPP=61.6401;EPPR=578.483;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=59.6803;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.97026;PAO=0;PQA=0;PQR=0;PRO=0;QA=921;QR=9219;RO=269;RPL=27;RPP=61.6401;RPPR=587.136;RPR=0;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=268;SRP=578.483;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:313:0:0:0,-2.70927,-28.507 0/1:44:30,14:30:1021:14:473:-29.6468,0,-78.9515 0/0:31:31,0:31:1069:0:0:0,-9.33193,-96.5195 0/1:79:69,9:69:2382:9:310:-4.65657,0,-191.092 0/0:72:72,0:72:2482:0:0:0,-21.6742,-222.015 0/0:62:58,4:58:1952:4:138:0,-5.90346,-161.563 dDocent_Contig_4120 17 . A C 94.1312 . AB=0.0983607;ABP=259.422;AC=1;AF=0.0833333;AN=12;AO=27;CIGAR=1X;DP=775;DPB=775;DPRA=1.27696;EPP=61.6401;EPPR=1627.27;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.998663;PAO=0;PQA=0;PQR=0;PRO=0;QA=1086;QR=29804;RO=748;RPL=0;RPP=61.6401;RPPR=1627.27;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=748;SRP=1627.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:114:114,0:114:4584:0:0:0,-34.3174,-412.471 0/0:89:89,0:89:3555:0:0:0,-26.7917,-319.983 0/0:119:110,9:110:4396:9:356:0,-3.42135,-363.175 0/0:144:144,0:144:5694:0:0:0,-43.3483,-512.275 0/1:183:165,18:165:6550:18:730:-10.936,0,-534.138 0/0:126:126,0:126:5025:0:0:0,-37.9298,-452.124 dDocent_Contig_4121 14 . G A 4395.76 . AB=0.0406577;ABP=6133.33;AC=0;AF=0;AN=12;AO=153;CIGAR=2M1X1M;DP=4123;DPB=3891;DPRA=0;EPP=335.246;EPPR=7592.31;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.993464;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6083;QR=137948;RO=3495;RPL=0;RPP=335.246;RPPR=7592.31;RPR=153;RUN=1;SAF=153;SAP=335.246;SAR=0;SRF=3495;SRP=7592.31;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:680:543,107,28:543:21330:107,28:4176,1106:-179.782,0,-1722.06,-252.243,-1663.27,-1998.08 0|0:752:637,90,22:637:25154:90,22:3524,865:-97.9784,0,-2042.66,-218.594,-1998.61,-2281.72 0|0:629:518,85,26:518:20456:85,26:3307,1041:-115.773,0,-1657.56,-185.949,-1597.39,-1861.28 0|0:591:505,66,18:505:19919:66,18:2504,715:-53.2488,0,-1618.96,-146.403,-1579.96,-1779.82 0|0:778:699,60,17:699:27570:60,17:2310,683:0,-20.7862,-2271.02,-154.133,-2232.8,-2417.31 0|0:693:593,56,42:593:23519:56,42:2188,1673:-1.34621,0,-1919.1,-42.0959,-1798.21,-1965.42 dDocent_Contig_4122 15 . G A 114.018 . AB=0.0889621;ABP=893.783;AC=1;AF=0.0833333;AN=12;AO=151;CIGAR=1X;DP=3924;DPB=3924;DPRA=0.78717;EPP=330.903;EPPR=8193.8;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99894;PAO=0;PQA=0;PQR=0;PRO=0;QA=6008;QR=149965;RO=3772;RPL=0;RPP=330.903;RPPR=8193.8;RPR=151;RUN=1;SAF=151;SAP=330.903;SAR=0;SRF=3772;SRP=8193.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:579:570,8:570:22662:8:319:0,-145.32,-2008.58 0/1:607:553,54:553:22048:54:2172:-12.9247,0,-1799.7 0/0:528:491,37:491:19391:37:1483:0,-25.2288,-1609.9 0/0:664:614,50:614:24385:50:2014:0,-18.438,-2011.08 0/0:795:795,0:795:31599:0:0:0,-239.319,-2841.06 0/0:751:749,2:749:29880:2:20:0,-224.174,-2684.6 dDocent_Contig_4123 11 . A G 2197.91 . AB=0.173913;ABP=682.776;AC=6;AF=0.5;AN=12;AO=128;CIGAR=1X3M1X;DP=736;DPB=736;DPRA=0;EPP=280.959;EPPR=1316.75;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5011;QR=23815;RO=605;RPL=0;RPP=280.959;RPPR=1316.75;RPR=128;RUN=1;SAF=128;SAP=280.959;SAR=0;SRF=605;SRP=1316.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:115:92,23:92:3619:23:893:-46.0588,0,-291.158 0|1:139:118,20:118:4633:20:775:-28.1209,0,-374.995 0|1:104:91,13:91:3604:13:514:-15.3012,0,-293.111 0|1:136:105,30:105:4150:30:1189:-66.247,0,-332.459 0|1:126:103,22:103:4034:22:877:-41.2151,0,-325.072 0|1:116:96,20:96:3775:20:763:-34.0701,0,-304.882 dDocent_Contig_4124 19 . A G 1621.77 . AB=0.109012;ABP=2463.47;AC=2;AF=0.166667;AN=12;AO=243;CIGAR=1X;DP=5975;DPB=5975;DPRA=0;EPP=530.678;EPPR=12447.7;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999826;PAO=0;PQA=0;PQR=0;PRO=0;QA=9671;QR=227884;RO=5731;RPL=0;RPP=530.678;RPPR=12447.7;RPR=243;RUN=1;SAF=243;SAP=530.678;SAR=0;SRF=5731;SRP=12447.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:933:825,108:825:32679:108:4346:-110.218,0,-2657.33 0/0:1118:1088,29:1088:43220:29:1168:0,-231.263,-3780.4 0/0:738:730,8:730:29122:8:326:0,-192.45,-2588.62 0/1:920:826,94:826:32946:94:3690:-55.1805,0,-2685.2 0/0:1218:1217,1:1217:48406:1:40:0,-362.659,-4347.98 0/0:1048:1045,3:1045:41511:3:101:0,-306.063,-3722.73 dDocent_Contig_4126 107 . N C 254.114 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=11;CIGAR=1X;DP=13;DPB=13;DPRA=0;EPP=26.8965;EPPR=0;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=260;QR=0;RO=0;RPL=0;RPP=26.8965;RPPR=0;RPR=11;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:41:-3.89396,-0.60206,0 1/1:3:0,3:0:0:3:88:-8.21187,-0.90309,0 1/1:1:0,1:0:0:1:30:-2.99957,-0.30103,0 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 1/1:3:0,2:0:0:2:20:-1.81999,-0.60206,0 1/1:3:0,2:0:0:2:52:-4.80563,-0.60206,0 dDocent_Contig_4127 20 . A G 1737.73 . AB=0.15302;ABP=782.085;AC=1;AF=0.0833333;AN=12;AO=186;CIGAR=1X;DP=2557;DPB=2557;DPRA=0;EPP=324.715;EPPR=5045.7;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0.946237;PAIREDR=0.983122;PAO=0;PQA=0;PQR=0;PRO=0;QA=7220;QR=92132;RO=2370;RPL=0;RPP=406.904;RPPR=5149.4;RPR=186;RUN=1;SAF=176;SAP=324.715;SAR=10;SRF=2358;SRP=5045.7;SRR=12;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:319:304,15:304:11795:15:584:0,-43.133,-1008 0/0:343:338,5:338:13230:5:197:0,-85.1501,-1171.77 0/0:311:286,25:286:11202:25:959:0,-7.02155,-920.939 0/0:317:306,11:306:11905:11:396:0,-59.4503,-1034.78 0/1:745:630,114:630:24398:114:4441:-175.295,0,-1969.71 0/0:522:506,16:506:19602:16:643:0,-98.934,-1704.62 dDocent_Contig_4128 51 . G A 157.068 . AB=0.12844;ABP=133.717;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=477;DPB=477;DPRA=0.773234;EPP=39.9253;EPPR=997.545;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.962882;PAO=0;PQA=0;PQR=0;PRO=0;QA=687;QR=18136;RO=458;RPL=17;RPP=39.9253;RPPR=997.545;RPR=0;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=458;SRP=997.545;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:34,8:34:1362:8:324:-16.8861,0,-110.191 0/1:67:60,6:60:2354:6:241:-1.79004,0,-191.738 0/0:93:93,0:93:3692:0:0:0,-27.9958,-332.299 0/0:99:96,3:96:3783:3:122:0,-18.4295,-329.104 0/0:77:77,0:77:3078:0:0:0,-23.1793,-277.099 0/0:99:98,0:98:3867:0:0:0,-29.5009,-347.652 dDocent_Contig_4129 36 . C G 81.1701 . AB=0.222222;ABP=15.074;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=200;DPB=200;DPRA=2.49438;EPP=13.8677;EPPR=426.447;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.6;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=204;QR=7765;RO=195;RPL=0;RPP=13.8677;RPPR=426.447;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=195;SRP=426.447;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:93:92,1:92:3688:1:41:0,-23.9012,-327.837 0/0:14:14,0:14:563:0:0:0,-4.21442,-51.0105 0/0:18:18,0:18:678:0:0:0,-5.41854,-61.3382 0/0:44:44,0:44:1776:0:0:0,-13.2453,-160.053 0/0:13:13,0:13:491:0:0:0,-3.91339,-44.5212 0/1:18:14,4:14:569:4:163:-9.63989,0,-46.1323 dDocent_Contig_4130 13 . A C 59.9731 . AB=0.132075;ABP=65.3275;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=285;DPB=285;DPRA=1.13187;EPP=20.3821;EPPR=604.508;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.875;PAIREDR=0.545126;PAO=0;PQA=0;PQR=0;PRO=0;QA=297;QR=11056;RO=277;RPL=0;RPP=20.3821;RPPR=604.508;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=277;SRP=604.508;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1655:0:0:0,-12.3422,-149.175 0/0:52:52,0:52:2097:0:0:0,-15.6536,-188.904 0/0:50:50,0:50:1965:0:0:0,-15.0515,-177.049 0/0:39:39,0:39:1557:0:0:0,-11.7402,-140.366 0/1:53:46,7:46:1823:7:257:-7.52019,0,-148.328 0/0:50:49,1:49:1959:1:40:0,-11.0558,-172.51 dDocent_Contig_4131 18 . A G 1026.97 . AB=0.143713;ABP=555.409;AC=1;AF=0.0833333;AN=12;AO=127;CIGAR=1X;DP=4989;DPB=4989;DPRA=0.491061;EPP=278.787;EPPR=10554.2;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.999794;PAO=0;PQA=0;PQR=0;PRO=0;QA=4941;QR=193601;RO=4859;RPL=0;RPP=278.787;RPPR=10554.2;RPR=127;RUN=1;SAF=127;SAP=278.787;SAR=0;SRF=4859;SRP=10554.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:501:429,72:429:17067:72:2829:-103.919,0,-1383.89 0/0:876:847,29:847:33719:29:1082:0,-166.052,-2934 0/0:474:472,1:472:18768:1:35:0,-139.113,-1684.25 0/0:621:595,25:595:23663:25:995:0,-96.9064,-2037.84 0/0:1380:1379,0:1379:55072:0:0:0,-415.12,-4950.77 0/0:1137:1137,0:1137:45312:0:0:0,-342.271,-4073.81 dDocent_Contig_4132 25 . G A 284.28 . AB=0.194805;ABP=65.3062;AC=2;AF=0.166667;AN=12;AO=21;CIGAR=1X;DP=352;DPB=352;DPRA=0.39661;EPP=48.6112;EPPR=721.768;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=842;QR=13051;RO=331;RPL=0;RPP=48.6112;RPPR=721.768;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=331;SRP=721.768;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:35,6:35:1350:6:242:-9.81472,0,-109.412 0/0:42:40,2:40:1577:2:78:0,-5.23996,-134.765 0/1:36:27,9:27:1088:9:359:-21.8351,0,-87.3696 0/0:62:59,3:59:2299:3:122:0,-7.29137,-195.704 0/0:118:118,0:118:4693:0:0:0,-35.5215,-422.284 0/0:53:52,1:52:2044:1:41:0,-11.86,-180.054 dDocent_Contig_4133 98 . N T 259.961 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=262;QR=0;RO=0;RPL=8;RPP=20.3821;RPPR=0;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:105:-9.79616,-0.90309,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:2:0,2:0:0:2:55:-5.22366,-0.60206,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 dDocent_Contig_4134 17 . C T 42.9514 . AB=0.129032;ABP=40.0654;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=454;DPB=454;DPRA=0.459807;EPP=22.5536;EPPR=967.144;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.222222;PAIREDR=0.984234;PAO=0;PQA=0;PQR=0;PRO=0;QA=368;QR=17918;RO=444;RPL=0;RPP=22.5536;RPPR=967.144;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=444;SRP=967.144;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:57:56,1:56:2267:1:40:0,-13.163,-200.186 0/0:55:51,4:51:2060:4:164:0,-1.40675,-170.426 0/1:31:27,4:27:1103:4:164:-5.81797,0,-90.218 0/0:60:60,0:60:2422:0:0:0,-18.0618,-218.116 0/0:142:141,0:141:5681:0:0:0,-42.4452,-510.78 0/0:109:109,0:109:4385:0:0:0,-32.8123,-394.571 dDocent_Contig_4135 26 . T A 2099.45 . AB=0.276527;ABP=137.914;AC=2;AF=0.166667;AN=12;AO=88;CIGAR=1X;DP=879;DPB=879;DPRA=0.953333;EPP=194.1;EPPR=1716.3;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99493;PAO=0;PQA=0;PQR=0;PRO=0;QA=3427;QR=27291;RO=789;RPL=0;RPP=194.1;RPPR=1716.3;RPR=88;RUN=1;SAF=88;SAP=194.1;SAR=0;SRF=789;SRP=1716.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:123:123,0:123:4205:0:0:0,-37.0267,-378.598 0/0:177:177,0:177:6115:0:0:0,-53.2823,-550.423 0/0:118:116,2:116:4077:2:26:0,-33.0516,-364.607 0/0:150:150,0:150:5178:0:0:0,-45.1545,-466.132 0/1:180:124,54:124:4306:54:2122:-137.225,0,-333.742 0/1:131:99,32:99:3410:32:1279:-75.9417,0,-267.652 dDocent_Contig_4136 43 . A C 35.4729 . AB=0.116279;ABP=58.0041;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=205;DPB=205;DPRA=1.32716;EPP=13.8677;EPPR=437.305;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.4;PAIREDR=0.785;PAO=0;PQA=0;PQR=0;PRO=0;QA=196;QR=7920;RO=200;RPL=0;RPP=13.8677;RPPR=437.305;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=200;SRP=437.305;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1142:0:0:0,-9.0309,-103.055 0/1:43:38,5:38:1508:5:196:-5.07004,0,-123.019 0/0:25:25,0:25:1000:0:0:0,-7.52575,-90.2941 0/0:51:51,0:51:2009:0:0:0,-15.3525,-181.005 0/0:27:27,0:27:1078:0:0:0,-8.12781,-97.3099 0/0:29:29,0:29:1183:0:0:0,-8.72987,-106.742 dDocent_Contig_4137 58 . T G 34131.5 . AB=0.570918;ABP=88.6328;AC=6;AF=0.5;AN=12;AO=1119;CIGAR=1X2M;DP=1960;DPB=1960;DPRA=0;EPP=2432.89;EPPR=1644.64;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.991957;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=44366;QR=29809;RO=756;RPL=1119;RPP=2432.89;RPPR=1644.64;RPR=0;RUN=1;SAF=1119;SAP=2432.89;SAR=0;SRF=756;SRP=1644.64;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:304:106,13,185:106:4156:13,185:514,7290:-567.758,-557.368,-895.209,0,-299.452,-286.061 0|1:402:135,11,256:135:5326:11,256:437,10185:-797.918,-802.582,-1237.46,0,-402.214,-361.125 0|1:243:122,0,120:122:4838:0,120:0,4820:-360.435,-397.161,-795.366,0,-398.204,-362.08 0|1:381:201,0,180:201:7882:0,180:0,7073:-521.565,-582.072,-1230.19,0,-648.512,-594.327 0|1:325:67,38,220:67:2672:38,220:1509,8765:-701.544,-597.487,-806.086,0,-95.8131,-153.812 0|1:305:125,22,158:125:4935:22,158:864,6233:-475.152,-441.722,-841.143,0,-334.986,-358.482 dDocent_Contig_4138 24 . G A 1454.92 . AB=0.173729;ABP=439.439;AC=2;AF=0.166667;AN=12;AO=109;CIGAR=1X;DP=1224;DPB=1224;DPRA=1.04937;EPP=239.701;EPPR=2422.03;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996409;PAO=0;PQA=0;PQR=0;PRO=0;QA=4276;QR=43902;RO=1114;RPL=0;RPP=239.701;RPPR=2422.03;RPR=109;RUN=1;SAF=109;SAP=239.701;SAR=0;SRF=1114;SRP=2422.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:169:156,13:156:6139:13:512:0,-4.44854,-505.864 0/0:188:174,14:174:6875:14:552:0,-6.57245,-568.452 0/1:300:232,67:232:9153:67:2636:-147.013,0,-732.887 0/1:172:157,15:157:6138:15:576:-0.392324,0,-500.422 0/0:226:226,0:226:8891:0:0:0,-68.0328,-799.705 0/0:169:169,0:169:6706:0:0:0,-50.8741,-603.265 dDocent_Contig_4139 28 . C A 313.677 . AB=0.100529;ABP=788.911;AC=1;AF=0.0833333;AN=12;AO=76;CIGAR=1X;DP=3360;DPB=3360;DPRA=0.765432;EPP=168.042;EPPR=7131.95;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.998477;PAO=0;PQA=0;PQR=0;PRO=0;QA=3016;QR=131030;RO=3283;RPL=0;RPP=168.042;RPPR=7131.95;RPR=76;RUN=1;SAF=76;SAP=168.042;SAR=0;SRF=3283;SRP=7131.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:490:490,0:490:19523:0:0:0,-147.505,-1755.47 0/0:655:655,0:655:26063:0:0:0,-197.175,-2343.39 0/0:363:344,19:344:13818:19:756:0,-40.9116,-1174.2 0/0:504:504,0:504:20179:0:0:0,-151.719,-1814.42 0/0:781:780,0:780:31061:0:0:0,-234.803,-2792.31 0/1:567:510,57:510:20386:57:2260:-32.8906,0,-1662.34 dDocent_Contig_4140 186 . C G 4433.85 . AB=0.379391;ABP=56.9615;AC=2;AF=0.166667;AN=12;AO=162;CIGAR=1X;DP=1137;DPB=1137;DPRA=1.20282;EPP=354.789;EPPR=2115.85;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.987667;PAO=0;PQA=0;PQR=0;PRO=0;QA=6389;QR=38280;RO=973;RPL=162;RPP=354.789;RPPR=2115.85;RPR=0;RUN=1;SAF=0;SAP=354.789;SAR=162;SRF=0;SRP=2115.85;SRR=973;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:171:171,0:171:6732:0:0:0,-51.4761,-605.593 0/0:184:182,0:182:7140:0:0:0,-54.7875,-642.011 0/0:127:127,0:127:5044:0:0:0,-38.2308,-453.832 0/0:228:228,0:228:9039:0:0:0,-68.6348,-812.998 0/1:236:141,95:141:5495:95:3748:-266.29,0,-423.337 0/1:191:124,67:124:4830:67:2641:-180.316,0,-377.107 dDocent_Contig_4141 18 . T A 152.5 . AB=0.102362;ABP=351.848;AC=2;AF=0.166667;AN=12;AO=57;CIGAR=1X;DP=766;DPB=766;DPRA=0;EPP=126.784;EPPR=1542.58;GTI=0;LEN=1;MEANALT=1;MQM=57.2982;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.987306;PAO=0;PQA=0;PQR=0;PRO=0;QA=2274;QR=28142;RO=709;RPL=0;RPP=126.784;RPPR=1542.58;RPR=57;RUN=1;SAF=57;SAP=126.784;SAR=0;SRF=709;SRP=1542.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:139:135,4:135:5401:4:159:0,-27.1768,-471.249 0/0:157:146,11:146:5715:11:441:0,-7.24743,-474.171 0/0:121:112,9:112:4440:9:363:0,-3.6139,-366.738 0/1:147:133,14:133:5267:14:565:-6.90332,0,-429.636 0/1:107:95,12:95:3799:12:483:-11.5685,0,-309.706 0/0:95:88,7:88:3520:7:263:0,-4.62753,-292.865 dDocent_Contig_4142 1 . N G 193.617 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=203;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:121:-11.2802,-0.90309,0 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_4143 77 . C T 75.918 . AB=0.235294;ABP=13.3567;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=334;DPB=334;DPRA=0.553488;EPP=16.0391;EPPR=715.253;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=55.3476;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.911585;PAO=0;PQA=0;PQR=0;PRO=0;QA=233;QR=12608;RO=328;RPL=6;RPP=16.0391;RPPR=715.253;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=328;SRP=715.253;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:76:75,1:75:2853:1:39:0,-18.9817,-253.047 0/0:91:91,0:91:3399:0:0:0,-27.3937,-272.999 0/0:50:50,0:50:1985:0:0:0,-15.0515,-171.721 0/0:74:74,0:74:2876:0:0:0,-22.2762,-225.276 0/1:17:13,4:13:517:4:154:-9.11467,0,-41.7572 0/0:26:25,1:25:978:1:40:0,-3.8311,-81.7812 dDocent_Contig_4144 98 . N T 26322.7 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=859;CIGAR=1X;DP=863;DPB=863;DPRA=0;EPP=1868.31;EPPR=0;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=29231;QR=0;RO=0;RPL=859;RPP=1868.31;RPPR=0;RPR=0;RUN=1;SAF=859;SAP=1868.31;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:104:0,104:0:0:104:3521:-317.116,-31.3071,0 1/1:185:0,185:0:0:185:6334:-570.201,-55.6906,0 1/1:114:0,114:0:0:114:3875:-348.967,-34.3174,0 1/1:73:0,70:0:0:70:2352:-211.604,-21.0721,0 1/1:312:0,312:0:0:312:10630:-956.705,-93.9214,0 1/1:75:0,74:0:0:74:2519:-226.899,-22.2762,0 dDocent_Contig_4145 12 . A T 35538 . AB=0.751519;ABP=816.799;AC=6;AF=0.5;AN=12;AO=1113;CIGAR=1X;DP=1481;DPB=1481;DPRA=0;EPP=2419.86;EPPR=797.769;GTI=0;LEN=1;MEANALT=1.33333;MQM=59.9964;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994536;PAO=0;PQA=0;PQR=0;PRO=0;QA=44592;QR=14643;RO=366;RPL=0;RPP=2419.86;RPPR=797.769;RPR=1113;RUN=1;SAF=1113;SAP=2419.86;SAR=0;SRF=366;SRP=797.769;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:149:68,80:68:2724:80:3186:-241.994,0,-200.468 0/1:222:67,155:67:2659:155:6224:-493.061,0,-172.606 0/1:108:52,56:52:2105:56:2216:-167.095,0,-157.113 0/1:199:70,128:70:2817:128:5093:-398.225,0,-193.618 0/1:518:65,453:65:2568:453:18162:-1477.11,0,-75.322 0/1:285:44,241:44:1770:241:9711:-787.538,0,-73.7188 dDocent_Contig_4146 23 . C G 48.7339 . AB=0.109375;ABP=87.8334;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=697;DPB=697;DPRA=0.428571;EPP=22.5536;EPPR=1477.49;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.555556;PAIREDR=0.902475;PAO=0;PQA=0;PQR=0;PRO=0;QA=360;QR=27676;RO=687;RPL=0;RPP=22.5536;RPPR=1494.81;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=685;SRP=1477.49;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:57,2:57:2295:2:79:0,-10.2631,-199.202 0/1:64:57,7:57:2298:7:281:-6.39626,0,-187.707 0/0:73:72,0:72:2913:0:0:0,-21.6742,-261.846 0/0:103:103,0:103:4128:0:0:0,-31.0061,-371.484 0/0:277:277,0:277:11174:0:0:0,-83.3853,-1004.85 0/0:121:121,0:121:4868:0:0:0,-36.4246,-437.993 dDocent_Contig_4147 15 . T A 24519.3 . AB=0.060241;ABP=700.105;AC=0;AF=0;AN=12;AO=25;CIGAR=2X;DP=1151;DPB=1151;DPRA=0;EPP=57.2971;EPPR=713.082;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.987768;PAO=0;PQA=0;PQR=0;PRO=0;QA=986;QR=12968;RO=327;RPL=0;RPP=57.2971;RPPR=713.082;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=327;SRP=713.082;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:175:60,0,115:60:2365:0,115:0,4556:-357.292,-375.354,-569.907,0,-194.947,-160.329 0|0:236:66,5,157:66:2602:5,157:199,6261:-495.718,-499.202,-711.755,0,-197.669,-166.792 0|0:179:49,20,110:49:1964:20,110:787,4347:-342.915,-292.936,-448.724,0,-97.0846,-128.699 0|0:210:62,0,143:62:2459:0,143:0,5637:-445.041,-463.705,-666.115,0,-202.401,-159.353 0|0:194:56,0,138:56:2227:0,138:0,5414:-428.729,-445.587,-628.941,0,-183.75,-142.208 0|0:157:34,0,123:34:1351:0,123:0,4898:-393.46,-403.695,-514.912,0,-111.614,-74.5872 dDocent_Contig_4148 61 . G A 975.762 . AB=0.154709;ABP=464.882;AC=3;AF=0.25;AN=12;AO=102;CIGAR=1X;DP=969;DPB=969;DPRA=0;EPP=224.5;EPPR=1851.09;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.931373;PAIREDR=0.94579;PAO=0;PQA=0;PQR=0;PRO=0;QA=3902;QR=34087;RO=867;RPL=102;RPP=224.5;RPPR=1885.68;RPR=0;RUN=1;SAF=102;SAP=224.5;SAR=0;SRF=863;SRP=1851.09;SRR=4;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:149:108,41:108:4221:41:1546:-94.5377,0,-335.024 0/0:156:145,11:145:5666:11:430:0,-7.90954,-470.74 0/1:192:175,17:175:6866:17:661:-2.02058,0,-559.852 0/1:105:94,11:94:3689:11:416:-6.17574,0,-300.432 0/0:195:185,10:185:7277:10:372:0,-24.8767,-620.798 0/0:172:160,12:160:6368:12:477:0,-8.49851,-529.577 dDocent_Contig_4149 55 . A G 681.051 . AB=0.252101;ABP=66.5304;AC=2;AF=0.166667;AN=12;AO=30;CIGAR=1X;DP=450;DPB=450;DPRA=0.719033;EPP=68.1545;EPPR=915.029;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=0.702381;PAO=0;PQA=0;PQR=0;PRO=0;QA=1183;QR=16252;RO=420;RPL=30;RPP=68.1545;RPPR=915.029;RPR=0;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=420;SRP=915.029;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:69:69,0:69:2633:0:0:0,-20.7711,-237.121 0/0:79:79,0:79:3106:0:0:0,-23.7814,-279.641 0/0:84:84,0:84:3243:0:0:0,-25.2865,-291.975 0/0:99:99,0:99:3801:0:0:0,-29.802,-342.144 0/1:61:50,11:50:1924:11:441:-21.6826,0,-155.007 0/1:58:39,19:39:1545:19:742:-49.6443,0,-121.833 dDocent_Contig_4150 18 . A C 209.362 . AB=0.152941;ABP=91.9385;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=973;DPB=973;DPRA=0.469543;EPP=35.5824;EPPR=2083.28;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=609;QR=35382;RO=958;RPL=0;RPP=35.5824;RPPR=2083.28;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=958;SRP=2083.28;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:55:55,0:55:2037:0:0:0,-16.5566,-183.571 0/0:100:98,2:98:3637:2:79:0,-22.6054,-319.987 0/1:85:72,13:72:2668:13:530:-22.4591,0,-214.735 0/0:108:108,0:108:3938:0:0:0,-32.5112,-354.574 0/0:373:373,0:373:13813:0:0:0,-112.284,-1242.7 0/0:252:252,0:252:9289:0:0:0,-75.8596,-835.834 dDocent_Contig_4151 12 . A C 770.071 . AB=0.18894;ABP=185.384;AC=3;AF=0.25;AN=12;AO=47;CIGAR=1X;DP=419;DPB=419;DPRA=0;EPP=105.07;EPPR=810.798;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1867;QR=14791;RO=372;RPL=0;RPP=105.07;RPPR=810.798;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=372;SRP=810.798;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:79:62,17:62:2476:17:677:-37.48,0,-199.205 0/0:82:78,4:78:3081:4:157:0,-10.1762,-262.87 0/1:50:40,10:40:1588:10:398:-21.1267,0,-128.11 0/1:88:74,14:74:2932:14:553:-23.6222,0,-237.495 0/0:82:81,1:81:3234:1:41:0,-20.5899,-287.039 0/0:38:37,1:37:1480:1:41:0,-7.34457,-129.347 dDocent_Contig_4152 113 . C T 42.3989 . AB=0.121212;ABP=85.263;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=458;DPB=458;DPRA=0.841837;EPP=20.3821;EPPR=980.173;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.966667;PAO=0;PQA=0;PQR=0;PRO=0;QA=281;QR=15919;RO=450;RPL=0;RPP=20.3821;RPPR=980.173;RPR=8;RUN=1;SAF=0;SAP=20.3821;SAR=8;SRF=0;SRP=980.173;SRR=450;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:85:85,0:85:3016:0:0:0,-25.5875,-271.674 0/0:95:95,0:95:3391:0:0:0,-28.5978,-305.406 0/0:51:51,0:51:1814:0:0:0,-15.3525,-163.542 0/1:66:58,8:58:2042:8:281:-5.76274,0,-164.183 0/0:89:89,0:89:3112:0:0:0,-26.7917,-280.308 0/0:72:72,0:72:2544:0:0:0,-21.6742,-229.211 dDocent_Contig_4153 27 . G A 2134.49 . AB=0.132597;ABP=1488.53;AC=2;AF=0.166667;AN=12;AO=278;CIGAR=1X;DP=4873;DPB=4873;DPRA=0;EPP=606.68;EPPR=9974.41;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11028;QR=182148;RO=4592;RPL=0;RPP=606.68;RPPR=9974.41;RPR=278;RUN=1;SAF=278;SAP=606.68;SAR=0;SRF=4592;SRP=9974.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:618:548,70:548:21778:70:2772:-63.5625,0,-1772.15 0/0:904:840,64:840:33207:64:2545:0,-42.946,-2756.51 0/0:652:633,19:633:25230:19:758:0,-127.729,-2199.94 0/1:649:550,98:550:21809:98:3873:-153.108,0,-1765.54 0/0:1181:1180,1:1180:46790:1:34:0,-352.117,-4203.36 0/0:869:841,26:841:33334:26:1046:0,-166.955,-2902.64 dDocent_Contig_4154 12 . T C 322.992 . AB=0.179245;ABP=97.7357;AC=3;AF=0.25;AN=12;AO=27;CIGAR=1X;DP=268;DPB=268;DPRA=1.58667;EPP=61.6401;EPPR=526.335;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.925926;PAIREDR=0.966805;PAO=0;PQA=0;PQR=0;PRO=0;QA=1082;QR=9254;RO=241;RPL=0;RPP=61.6401;RPPR=526.335;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=241;SRP=526.335;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:20,5:20:775:5:199:-10.7628,0,-62.5465 0/0:30:30,0:30:1158:0:0:0,-9.0309,-104.509 0/0:93:87,6:87:3301:6:242:0,-5.83884,-275.051 0/0:39:37,2:37:1431:2:81:0,-4.05444,-121.376 0/1:39:30,9:30:1157:9:359:-20.931,0,-92.6843 0/1:42:37,5:37:1432:5:201:-5.82726,0,-116.507 dDocent_Contig_4155 25 . C T 49.4048 . AB=0.114754;ABP=81.6461;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=1X;DP=169;DPB=169;DPRA=1.12963;EPP=18.2106;EPPR=354.789;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.714286;PAIREDR=0.635802;PAO=0;PQA=0;PQR=0;PRO=0;QA=286;QR=6381;RO=162;RPL=0;RPP=18.2106;RPPR=354.789;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=162;SRP=354.789;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:840:0:0:0,-6.32163,-75.9127 0/1:38:34,4:34:1334:4:163:-3.61929,0,-108.875 0/0:27:27,0:27:1079:0:0:0,-8.12781,-97.3995 0/1:23:20,3:20:753:3:123:-4.5411,0,-61.1473 0/0:23:23,0:23:918:0:0:0,-6.92369,-82.9213 0/0:37:37,0:37:1457:0:0:0,-11.1381,-131.371 dDocent_Contig_4156 106 . N A 3149.76 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=103;CIGAR=2X;DP=103;DPB=103;DPRA=0;EPP=226.672;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3469;QR=0;RO=0;RPL=0;RPP=226.672;RPPR=0;RPR=103;RUN=1;SAF=0;SAP=226.672;SAR=103;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:25:0,25:0:0:25:841:-75.9989,-7.52575,0 1|1:22:0,22:0:0:22:752:-67.9971,-6.62266,0 1|1:4:0,4:0:0:4:138:-12.7604,-1.20412,0 1|1:20:0,20:0:0:20:651:-58.8956,-6.0206,0 1|1:10:0,10:0:0:10:349:-31.7468,-3.0103,0 1|1:22:0,22:0:0:22:738:-66.7325,-6.62266,0 dDocent_Contig_4157 11 . G A 399.511 . AB=0.182609;ABP=103.634;AC=1;AF=0.0833333;AN=12;AO=38;CIGAR=1X;DP=985;DPB=985;DPRA=1.53512;EPP=85.5263;EPPR=2059.39;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998944;PAO=0;PQA=0;PQR=0;PRO=0;QA=1529;QR=37321;RO=947;RPL=0;RPP=85.5263;RPPR=2059.39;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=947;SRP=2059.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:201:196,5:196:7700:5:203:0,-41.854,-674.002 0/0:251:242,9:242:9602:9:365:0,-42.3437,-830.397 0/1:115:94,21:94:3735:21:842:-41.4739,0,-301.546 0/0:176:173,3:173:6817:3:119:0,-41.8861,-602.154 0/0:118:118,0:118:4597:0:0:0,-35.5215,-413.674 0/0:124:124,0:124:4870:0:0:0,-37.3277,-438.212 dDocent_Contig_4158 11 . G T 2527.74 . AB=0.226824;ABP=331.639;AC=5;AF=0.416667;AN=12;AO=118;CIGAR=1X;DP=571;DPB=571;DPRA=0;EPP=259.244;EPPR=978.021;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9117;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995585;PAO=0;PQA=0;PQR=0;PRO=0;QA=4710;QR=17989;RO=453;RPL=0;RPP=259.244;RPPR=986.687;RPR=118;RUN=1;SAF=118;SAP=259.244;SAR=0;SRF=452;SRP=978.021;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:74:62,12:62:2440:12:475:-20.8224,0,-197.48 0/1:79:66,13:66:2588:13:525:-23.8153,0,-209.255 0/0:64:61,3:61:2397:3:120:0,-8.07861,-204.694 0/1:95:67,28:67:2681:28:1127:-73.1086,0,-212.803 0/1:88:69,19:69:2766:19:753:-41.6008,0,-222.56 0/1:171:128,43:128:5117:43:1710:-102.649,0,-408.925 dDocent_Contig_4159 12 . A T 475.296 . AB=0.0307971;ABP=1058.55;AC=1;AF=0.0833333;AN=12;AO=23;CIGAR=4X3M;DP=1502;DPB=1505.86;DPRA=0.952602;EPP=52.9542;EPPR=2508.89;GTI=0;LEN=1;MEANALT=6.75;MQM=33.3043;MQMR=56.5901;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0.545927;PAO=0;PQA=0;PQR=0;PRO=0;QA=765;QR=44587;RO=1154;RPL=0;RPP=52.9542;RPPR=2508.89;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=1154;SRP=2508.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:208:145,29,0,18:145:5589:29,0,18:1129,0,724:-16.0144,-8.44706,-457.533,-59.6637,-466.263,-517.519,0,-406.638,-457.892,-452.473 0|0:325:229,46,3,28:229:8788:46,3,28:1812,105,1128:-24.0116,-4.47335,-708.477,-85.17,-714.548,-802.149,0,-629.416,-710.142,-709.49 0|1:227:142,35,14,14:142:5533:35,14,14:1361,462,560:-12.7255,0,-441.74,-21.8965,-418.709,-469.996,-9.3342,-406.158,-428.09,-457.447 0|0:258:214,12,2,11:214:8233:12,2,11:454,66,444:0,-40.4843,-710.588,-59.6253,-709.404,-732.759,-28.2742,-678.077,-697.238,-698.722 0|0:269:245,13,0,9:245:9517:13,0,9:505,0,366:0,-47.5357,-822.093,-73.7523,-826.007,-852.283,-43.5072,-795.816,-822.092,-819.383 0|0:215:179,9,4,15:179:6927:9,4,15:356,132,603:0,-34.9406,-598.886,-44.2961,-592.004,-609.761,-4.18104,-551.938,-561.308,-566.383 dDocent_Contig_4160 14 . C T 7224.69 . AB=0.0431034;ABP=844.344;AC=0;AF=0;AN=12;AO=20;CIGAR=1X2M1X;DP=1545;DPB=1545;DPRA=1.54667;EPP=46.4397;EPPR=2558.83;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.95;PAIREDR=0.995752;PAO=0;PQA=0;PQR=0;PRO=0;QA=778;QR=46168;RO=1177;RPL=0;RPP=46.4397;RPPR=2558.83;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=1177;SRP=2558.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:333:240,0,0,92:240:9443:0,0,92:0,0,3586:-222.591,-294.838,-1071.59,-294.838,-1071.59,-1071.59,0,-776.871,-776.871,-749.176 0|0:375:317,0,0,57:317:12384:0,0,57:0,0,2249:-89.591,-185.018,-1203.03,-185.018,-1203.03,-1203.03,0,-1018,-1018,-1000.84 0|0:251:128,1,0,121:128:5070:1,0,121:41,0,4756:-352.751,-387.898,-804.887,-391.283,-805.188,-808.572,0,-414.042,-417.426,-381.001 0|0:213:152,19,19,23:152:5949:19,19,23:737,748,903:-28.5056,-13.7195,-497.111,-12.7318,-441.301,-496.125,0,-428.569,-427.583,-482.189 0|0:223:191,0,0,31:191:7444:0,0,31:0,0,1169:-38.2527,-95.7494,-707.556,-95.7494,-707.556,-707.556,0,-611.786,-611.786,-602.455 0|0:150:149,0,0,1:149:5878:0,0,1:0,0,40:0,-44.8535,-528.466,-44.8535,-528.466,-528.466,-41.1588,-525.17,-525.17,-524.869 dDocent_Contig_4161 98 . N T 98351.7 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=3237;CIGAR=1X;DP=3241;DPB=3241;DPRA=0;EPP=7032.07;EPPR=0;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=109292;QR=0;RO=0;RPL=3237;RPP=7032.07;RPPR=0;RPR=0;RUN=1;SAF=3237;SAP=7032.07;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:390:0,390:0:0:390:13136:-1182.17,-117.402,0 1/1:484:0,484:0:0:484:16390:-1474.94,-145.699,0 1/1:300:0,300:0:0:300:10090:-908.128,-90.309,0 1/1:383:0,380:0:0:380:12680:-1140.89,-114.391,0 1/1:1059:0,1058:0:0:1058:35863:-3226.56,-318.49,0 1/1:625:0,625:0:0:625:21133:-1901.65,-188.144,0 dDocent_Contig_4162 116 . G A 6286.7 . AB=0.371274;ABP=109.23;AC=4;AF=0.333333;AN=12;AO=283;CIGAR=1X;DP=889;DPB=889;DPRA=10.2588;EPP=617.537;EPPR=1314.58;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9845;QR=20702;RO=604;RPL=0;RPP=617.537;RPPR=1314.58;RPR=283;RUN=1;SAF=0;SAP=617.537;SAR=283;SRF=0;SRP=1314.58;SRR=604;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:134:124,9:124:4219:9:322:0,-10.8119,-350.603 0/1:247:126,121:126:4404:121:4216:-305.261,0,-322.187 0/1:180:126,54:126:4311:54:1844:-112.041,0,-333.988 0/1:244:151,92:151:5157:92:3217:-216.245,0,-390.784 0/0:17:17,0:17:562:0:0:0,-5.11751,-50.8903 0/1:67:60,7:60:2049:7:246:-2.31207,0,-164.51 dDocent_Contig_4163 43 . G A 246.672 . AB=0.180723;ABP=76.5003;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=360;DPB=360;DPRA=1.78947;EPP=37.7539;EPPR=749.997;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=606;QR=13592;RO=344;RPL=0;RPP=37.7539;RPPR=749.997;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=344;SRP=749.997;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:69:69,0:69:2737:0:0:0,-20.7711,-246.439 0/0:87:86,1:86:3402:1:41:0,-22.095,-302.142 0/1:83:68,15:68:2671:15:565:-26.1901,0,-215.544 0/0:48:48,0:48:1895:0:0:0,-14.4494,-170.761 0/0:35:35,0:35:1390:0:0:0,-10.536,-125.355 0/0:38:38,0:38:1497:0:0:0,-11.4391,-134.981 dDocent_Contig_4164 23 . A G 5495.35 . AB=0.425764;ABP=24.9336;AC=6;AF=0.5;AN=12;AO=195;CIGAR=1X;DP=458;DPB=458;DPRA=0;EPP=426.447;EPPR=571.936;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.994872;PAIREDR=0.992366;PAO=0;PQA=0;PQR=0;PRO=0;QA=7743;QR=10413;RO=262;RPL=0;RPP=426.447;RPPR=571.936;RPR=195;RUN=1;SAF=195;SAP=426.447;SAR=0;SRF=262;SRP=571.936;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:69:37,32:37:1475:32:1281:-94.7873,0,-112.222 0/1:102:57,45:57:2271:45:1778:-129.519,0,-173.856 0/1:61:41,20:41:1610:20:794:-53.4143,0,-126.767 0/1:94:55,39:55:2179:39:1555:-111.885,0,-167.98 0/1:59:38,21:38:1527:21:831:-57.3383,0,-119.912 0/1:73:34,38:34:1351:38:1504:-113.813,0,-100.056 dDocent_Contig_4165 1 . N G 70.2696 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=74;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:74:-7.02588,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_4166 14 . G A 55430.6 . AB=0.433708;ABP=172.873;AC=6;AF=0.5;AN=12;AO=1930;CIGAR=1X5M1X4M;DP=4450;DPB=4392.09;DPRA=0;EPP=4193.95;EPPR=4602.19;GTI=0;LEN=1;MEANALT=7.33333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=75330;QR=81161;RO=2118;RPL=0;RPP=4193.95;RPPR=4602.19;RPR=1930;RUN=1;SAF=1930;SAP=4193.95;SAR=0;SRF=2118;SRP=4602.19;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:700:376,0,276,45:376:14388:0,276,45:0,10693,1751:-765.142,-878.329,-2059,0,-1180.67,-1097.59,-734.447,-1915.12,-1036.79,-1901.57 0|1:595:279,0,296,16:279:10686:0,296,16:0,11497,646:-860.601,-944.589,-1821.55,0,-876.963,-787.858,-891.333,-1768.3,-823.707,-1763.48 0|1:496:246,26,194,26:246:9503:26,194,26:1045,7599,1029:-550.771,-538.71,-1311.35,0,-694.358,-722.073,-540.144,-1234.5,-695.792,-1312.79 0|1:619:182,9,357,65:182:7011:9,357,65:335,13939,2588:-1090.97,-1118.34,-1691.29,0,-548.244,-468.189,-932.66,-1480.91,-362.558,-1488.75 0|1:1104:661,31,317,89:661:25211:31,317,89:1243,12473,3472:-826.998,-923.566,-2982.41,0,-1965.76,-1972.75,-740.623,-2706.39,-1782.82,-2782.01 0|1:936:374,25,490,40:374:14362:25,490,40:992,19129,1575:-1459.8,-1490.72,-2662.11,0,-1097.25,-1031.41,-1442.84,-2540.09,-1049.37,-2609.71 dDocent_Contig_4167 9 . A T 4429.02 . AB=0.352459;ABP=95.2801;AC=2;AF=0.166667;AN=12;AO=173;CIGAR=1X;DP=1315;DPB=1315;DPRA=1.14169;EPP=378.675;EPPR=2480.66;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6625;QR=43177;RO=1141;RPL=0;RPP=378.675;RPPR=2480.66;RPR=173;RUN=1;SAF=173;SAP=378.675;SAR=0;SRF=1141;SRP=2480.66;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:186:186,0:186:7043:0:0:0,-55.9916,-633.748 0/0:213:212,1:212:8024:1:39:0,-60.2228,-718.076 0/0:250:250,0:250:9512:0:0:0,-75.2575,-855.794 0/0:178:177,0:177:6696:0:0:0,-53.2823,-602.159 0/1:252:167,85:167:6309:85:3232:-215.171,0,-491.892 0/1:236:149,87:149:5593:87:3354:-230.953,0,-432.317 dDocent_Contig_4168 17 . C T 4845.96 . AB=0.209804;ABP=749.111;AC=4;AF=0.333333;AN=12;AO=231;CIGAR=1X3M1X;DP=1481;DPB=1481;DPRA=1.27363;EPP=504.62;EPPR=2363.4;GTI=0;LEN=1;MEANALT=3.4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.22045e-16;PAIRED=1;PAIREDR=0.99908;PAO=0;PQA=0;PQR=0;PRO=0;QA=9059;QR=42355;RO=1087;RPL=0;RPP=504.62;RPPR=2363.4;RPR=231;RUN=1;SAF=231;SAP=504.62;SAR=0;SRF=1087;SRP=2363.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:273:191,46,35:191:7446:46,35:1798,1338:-90.3274,0,-598.176,-38.0516,-502.251,-639.53 0|1:312:192,68,49:192:7506:68,49:2658,1927:-160.722,0,-596.618,-60.0137,-458.583,-662.352 0|1:177:139,23,15:139:5426:23,15:900,579:-32.1572,0,-439.104,-26.4562,-398.482,-467.964 0|1:258:138,77,42:138:5399:77,42:3040,1617:-208.611,0,-420.727,-117.408,-311.16,-548.664 0|0:260:230,17,11:230:8966:17,11:663,437:0,-14.7455,-746.558,-33.2583,-715.7,-766.883 0|0:201:197,0,2:197:7612:0,2:0,74:0,-59.3029,-684.451,-53.2642,-678.398,-677.796 dDocent_Contig_4169 16 . G A 6806 . AB=0.255435;ABP=576.562;AC=2;AF=0.166667;AN=12;AO=282;CIGAR=1X;DP=3625;DPB=3625;DPRA=0.875843;EPP=615.366;EPPR=7262.24;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99641;PAO=0;PQA=0;PQR=0;PRO=0;QA=11295;QR=132980;RO=3343;RPL=0;RPP=615.366;RPPR=7262.24;RPR=282;RUN=1;SAF=282;SAP=615.366;SAR=0;SRF=3343;SRP=7262.24;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:572:572,0:572:22725:0:0:0,-172.189,-2043.3 0/0:818:818,0:818:32437:0:0:0,-246.243,-2916.37 0/0:505:505,0:505:20178:0:0:0,-152.02,-1814.3 0/0:626:626,0:626:24938:0:0:0,-188.445,-2242.24 0/1:618:479,139:479:19061:139:5568:-314.896,0,-1527.88 0/1:486:343,143:343:13641:143:5727:-368.926,0,-1080.38 dDocent_Contig_4170 51 . G A 398.283 . AB=0.164286;ABP=140.061;AC=1;AF=0.0833333;AN=12;AO=23;CIGAR=1X;DP=1115;DPB=1115;DPRA=0.717949;EPP=52.9542;EPPR=2374.26;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=921;QR=42614;RO=1092;RPL=23;RPP=52.9542;RPPR=2374.26;RPR=0;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=1092;SRP=2374.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:140:117,23:117:4532:23:921:-41.0502,0,-365.711 0/0:198:198,0:198:7641:0:0:0,-59.6039,-687.368 0/0:117:117,0:117:4674:0:0:0,-35.2205,-420.584 0/0:125:125,0:125:4872:0:0:0,-37.6287,-438.422 0/0:376:376,0:376:14654:0:0:0,-113.187,-1317.83 0/0:159:159,0:159:6241:0:0:0,-47.8638,-561.497 dDocent_Contig_4171 48 . T A 2050.5 . AB=0.150562;ABP=946.952;AC=4;AF=0.333333;AN=12;AO=151;CIGAR=1X;DP=1317;DPB=1317;DPRA=0;EPP=330.903;EPPR=2493.81;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996561;PAO=0;PQA=0;PQR=0;PRO=0;QA=5970;QR=45716;RO=1163;RPL=0;RPP=330.903;RPPR=2528.43;RPR=151;RUN=1;SAF=151;SAP=330.903;SAR=0;SRF=1159;SRP=2493.81;SRR=4;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:173:150,23:150:5943:23:889:-28.2317,0,-482.6 0/1:290:233,57:233:9232:57:2283:-118.334,0,-743.05 0/1:213:193,20:193:7535:20:795:-7.74876,0,-613.681 0/0:152:144,8:144:5703:8:294:0,-18.9495,-486.284 0/0:275:265,9:265:10336:9:356:0,-50.456,-897.209 0/1:214:178,34:178:6967:34:1353:-57.9577,0,-562.694 dDocent_Contig_4172 98 . N A 409.034 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=14;CIGAR=1X;DP=14;DPB=14;DPRA=0;EPP=33.4109;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=428;QR=0;RO=0;RPL=14;RPP=33.4109;RPPR=0;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:104:-9.70309,-0.90309,0 1/1:1:0,1:0:0:1:20:-1.99996,-0.30103,0 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 1/1:3:0,3:0:0:3:101:-9.42373,-0.90309,0 1/1:2:0,2:0:0:2:63:-5.98364,-0.60206,0 1/1:4:0,4:0:0:4:133:-12.2988,-1.20412,0 dDocent_Contig_4173 83 . T A 2189.24 . AB=0.164315;ABP=973.947;AC=4;AF=0.333333;AN=12;AO=176;CIGAR=1X;DP=1334;DPB=1334;DPRA=0;EPP=385.189;EPPR=2515.4;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6284;QR=41702;RO=1157;RPL=176;RPP=385.189;RPPR=2515.4;RPR=0;RUN=1;SAF=176;SAP=385.189;SAR=0;SRF=1157;SRP=2515.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:114:101,13:101:3589:13:442:-5.7873,0,-288.901 0/1:196:176,20:176:6188:20:707:-4.9539,0,-498.027 0/0:173:167,6:167:6025:6:209:0,-32.9281,-523.167 0/0:169:161,7:161:5895:7:257:0,-27.2049,-507.167 0/1:381:326,55:326:11806:55:1977:-63.5019,0,-947.629 0/1:301:226,75:226:8199:75:2692:-151.902,0,-647.261 dDocent_Contig_4174 49 . G A 370.835 . AB=0.5;ABP=3.0103;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=238;DPB=238;DPRA=0.666667;EPP=33.4109;EPPR=489.42;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=519;QR=8738;RO=224;RPL=0;RPP=33.4109;RPPR=489.42;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=224;SRP=489.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:46:46,0:46:1785:0:0:0,-13.8474,-160.882 0/0:51:51,0:51:2005:0:0:0,-15.3525,-180.653 0/0:52:52,0:52:2032:0:0:0,-15.6536,-183.08 0/0:45:45,0:45:1745:0:0:0,-13.5463,-157.273 0/1:28:14,14:14:557:14:519:-38.6064,0,-42.0432 0/0:16:16,0:16:614:0:0:0,-4.81648,-55.5948 dDocent_Contig_4175 12 . G T 66038.7 . AB=0.0288233;ABP=5689.66;AC=4;AF=0.333333;AN=12;AO=85;CIGAR=2X2M2X;DP=3389;DPB=3389;DPRA=0;EPP=187.585;EPPR=1234.24;GTI=0;LEN=1;MEANALT=5.2;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=4.44089e-16;PAIRED=0.941176;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3336;QR=22091;RO=567;RPL=0;RPP=187.585;RPPR=1234.24;RPR=85;RUN=1;SAF=85;SAP=187.585;SAR=0;SRF=567;SRP=1234.24;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:332:55,41,12,224,0:55:2138:41,12,224,0:1618,469,8879,0:-714.254,-597.682,-761.024,-692.254,-734.81,-864.326,0,-42.5518,-137.126,-108.252,-730.811,-773.366,-867.939,-175.683,-906.495 1|0:573:121,128,5,303,15:121:4709:128,5,303,15:5079,182,11978,600:-980.332,-598.662,-947.112,-1001.89,-970.782,-1387.37,-31.117,0,-403.236,-326.886,-967.332,-936.219,-1339.45,-368.673,-1349.8 1|0:390:50,65,8,265,0:50:1933:65,8,265,0:2587,312,10528,0:-905.905,-707.947,-847.134,-895.314,-841.057,-1051.66,-54.2645,0,-187.372,-133.243,-920.957,-866.701,-1054.07,-213.016,-1079.71 0|0:440:79,68,0,292,0:79:3091:68,0,292,0:2698,0,11589,0:-930.173,-731.861,-965.528,-953.955,-985.998,-1208.09,0,-32.0388,-254.135,-166.234,-953.955,-985.998,-1208.09,-254.135,-1208.09 1|0:914:138,550,3,167,53:138:5345:550,3,167,53:21614,121,6613,2076:-1841.17,-105.172,-378.666,-1872.73,-534.258,-2310.89,-1338.48,0,-1767.57,-1727.27,-1712.03,-373.549,-2141.11,-1606.86,-2135.13 0|1:740:124,395,57,92,70:124:4875:395,57,92,70:15566,2252,3620,2727:-1243.26,0,-282.075,-1095.27,-215.669,-1479.1,-982.838,-103.234,-1198.51,-1356.13,-1056.47,-176.868,-1272.14,-1159.71,-1436.38 dDocent_Contig_4176 54 . A G 261.226 . AB=0.142857;ABP=142.605;AC=1;AF=0.0833333;AN=12;AO=23;CIGAR=1X;DP=666;DPB=666;DPRA=0.785714;EPP=52.9542;EPPR=1399.27;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.998445;PAO=0;PQA=0;PQR=0;PRO=0;QA=929;QR=25434;RO=643;RPL=23;RPP=52.9542;RPPR=1399.27;RPR=0;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=643;SRP=1399.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:115:114,1:114:4541:1:41:0,-30.5239,-404.539 0/0:102:102,0:102:4051:0:0:0,-30.7051,-364.567 0/0:84:83,1:83:3268:1:40:0,-21.2908,-290.189 0/1:126:108,18:108:4211:18:725:-27.6455,0,-341.043 0/0:82:79,3:79:3171:3:123:0,-13.2197,-273.992 0/0:157:157,0:157:6192:0:0:0,-47.2617,-557.051 dDocent_Contig_4177 106 . N A 1475.71 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=49;CIGAR=2X;DP=49;DPB=49;DPRA=0;EPP=109.412;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1619;QR=0;RO=0;RPL=0;RPP=109.412;RPPR=0;RPR=49;RUN=1;SAF=0;SAP=109.412;SAR=49;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:10:0,10:0:0:10:336:-30.5657,-3.0103,0 1|1:25:0,25:0:0:25:838:-75.7304,-7.52575,0 1|1:6:0,6:0:0:6:187:-17.1376,-1.80618,0 1|1:8:0,8:0:0:8:258:-23.535,-2.40824,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_4178 22 . T C 1641.77 . AB=0.219101;ABP=246.996;AC=1;AF=0.0833333;AN=12;AO=116;CIGAR=1X;DP=2002;DPB=2002;DPRA=1.50306;EPP=254.901;EPPR=4098.41;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.997879;PAO=0;PQA=0;PQR=0;PRO=0;QA=4539;QR=74895;RO=1886;RPL=0;RPP=254.901;RPPR=4098.41;RPR=116;RUN=1;SAF=116;SAP=254.901;SAR=0;SRF=1886;SRP=4098.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:282:282,0:282:11144:0:0:0,-84.8905,-1002.23 0/0:382:382,0:382:15211:0:0:0,-114.993,-1367.85 0/0:163:163,0:163:6491:0:0:0,-49.0679,-583.928 0/0:316:316,0:316:12555:0:0:0,-95.1255,-1129.07 0/0:503:465,38:465:18460:38:1508:0,-15.4485,-1523.94 0/1:356:278,78:278:11034:78:3031:-165.7,0,-885.159 dDocent_Contig_4179 19 . A G 84.108 . AB=0.134328;ABP=80.8268;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=244;DPB=244;DPRA=0;EPP=39.9253;EPPR=495.935;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.982379;PAO=0;PQA=0;PQR=0;PRO=0;QA=667;QR=9058;RO=227;RPL=0;RPP=39.9253;RPPR=495.935;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=227;SRP=495.935;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:41,3:41:1658:3:119:0,-2.15031,-138.349 0/0:34:32,2:32:1292:2:82:0,-2.45534,-108.766 0/0:34:33,1:33:1338:1:40:0,-6.23934,-116.681 0/1:28:25,3:25:978:3:122:-2.94365,0,-79.8822 0/0:65:63,2:63:2481:2:81:0,-11.8812,-215.744 0/1:39:33,6:33:1311:6:223:-8.68082,0,-106.514 dDocent_Contig_4180 98 . N A 207.032 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=208;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:104:-9.70309,-0.90309,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 dDocent_Contig_4181 27 . T C 6149.58 . AB=0.314815;ABP=228.2;AC=5;AF=0.416667;AN=12;AO=245;CIGAR=1X;DP=888;DPB=888;DPRA=0;EPP=535.021;EPPR=1399.27;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990669;PAO=0;PQA=0;PQR=0;PRO=0;QA=9740;QR=25655;RO=643;RPL=0;RPP=535.021;RPPR=1399.27;RPR=245;RUN=1;SAF=245;SAP=535.021;SAR=0;SRF=643;SRP=1399.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:185:117,68:117:4682:68:2682:-185.808,0,-365.601 0/1:216:142,74:142:5678:74:2976:-202.9,0,-445.798 0/1:104:85,19:85:3397:19:758:-37.234,0,-274.455 0/1:164:106,58:106:4208:58:2320:-159.586,0,-329.311 0/0:132:125,7:125:4980:7:287:0,-13.5307,-421.877 0/1:87:68,19:68:2710:19:717:-38.6517,0,-217.823 dDocent_Contig_4182 50 . T A 9482.25 . AB=0.38796;ABP=100.814;AC=6;AF=0.5;AN=12;AO=348;CIGAR=1X;DP=897;DPB=897;DPRA=0;EPP=758.683;EPPR=1192.98;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13647;QR=21736;RO=548;RPL=348;RPP=758.683;RPPR=1192.98;RPR=0;RUN=1;SAF=348;SAP=758.683;SAR=0;SRF=548;SRP=1192.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:151:94,57:94:3720:57:2226:-155.071,0,-289.364 0/1:119:78,41:78:3064:41:1626:-110.75,0,-240.038 0/1:195:102,92:102:4064:92:3627:-267.979,0,-307.251 0/1:114:66,48:66:2635:48:1879:-135.002,0,-202.962 0/1:167:111,56:111:4396:56:2180:-146.106,0,-345.328 0/1:151:97,54:97:3857:54:2109:-144.54,0,-301.681 dDocent_Contig_4184 98 . N C 126.807 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=124;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:64:-6.07837,-0.60206,0 1/1:1:0,1:0:0:1:25:-2.49986,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_4185 20 . C A 9488.84 . AB=0.320141;ABP=322.488;AC=6;AF=0.5;AN=12;AO=364;CIGAR=1X;DP=1137;DPB=1137;DPRA=0;EPP=793.426;EPPR=1679.39;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993523;PAO=0;PQA=0;PQR=0;PRO=0;QA=14461;QR=31024;RO=772;RPL=0;RPP=793.426;RPPR=1679.39;RPR=364;RUN=1;SAF=364;SAP=793.426;SAR=0;SRF=772;SRP=1679.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:129:117,12:117:4707:12:472:-3.99595,0,-384.699 0/1:141:128,13:128:5149:13:517:-4.43184,0,-420.822 0/1:150:112,38:112:4484:38:1505:-90.5357,0,-358.334 0/1:147:106,40:106:4265:40:1591:-99.165,0,-339.531 0/1:260:163,97:163:6529:97:3889:-271.731,0,-509.033 0/1:310:146,164:146:5890:164:6487:-490.246,0,-436.53 dDocent_Contig_4186 40 . C T 1835.08 . AB=0.525424;ABP=3.67278;AC=4;AF=0.333333;AN=12;AO=63;CIGAR=1X;DP=155;DPB=155;DPRA=2.61818;EPP=139.813;EPPR=202.786;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.603175;PAIREDR=0.793478;PAO=0;PQA=0;PQR=0;PRO=0;QA=2540;QR=3669;RO=92;RPL=0;RPP=139.813;RPPR=202.786;RPR=63;RUN=1;SAF=63;SAP=139.813;SAR=0;SRF=92;SRP=202.786;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:11,15:11:430:15:604:-46.8692,0,-31.2224 0/1:34:21,13:21:844:13:529:-37.7216,0,-66.0377 0/1:41:13,28:13:511:28:1123:-89.0086,0,-33.9872 0/1:17:11,6:11:445:6:243:-17.1301,0,-35.2864 0/0:26:25,1:25:995:1:41:0,-3.73221,-85.7464 0/0:11:11,0:11:444:0:0:0,-3.31133,-40.314 dDocent_Contig_4187 20 . G A 511.644 . AB=0.31746;ABP=21.2438;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=167;DPB=167;DPRA=1.21154;EPP=46.4397;EPPR=322.217;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.857143;PAO=0;PQA=0;PQR=0;PRO=0;QA=807;QR=5880;RO=147;RPL=0;RPP=46.4397;RPPR=322.217;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=147;SRP=322.217;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:1159:0:0:0,-8.72987,-104.591 0/0:29:29,0:29:1160:0:0:0,-8.72987,-104.676 0/0:9:9,0:9:362:0:0:0,-2.70927,-32.9424 0/0:37:37,0:37:1469:0:0:0,-11.1381,-132.451 0/1:31:24,7:24:961:7:285:-16.6923,0,-77.4522 0/1:32:19,13:19:769:13:522:-37.694,0,-59.8976 dDocent_Contig_4188 41 . G A 78.4332 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=12;CIGAR=1M3I1X;DP=746;DPB=771.5;DPRA=1.33655;EPP=29.068;EPPR=1540.42;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.97191;PAO=0;PQA=0;PQR=0;PRO=0;QA=477;QR=27922;RO=712;RPL=0;RPP=29.068;RPPR=1540.42;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=712;SRP=1549.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:116:115,0,0:115:4526:0,0:0,0:0,-34.6184,-406.927,-34.6184,-406.927,-406.927 0|0:124:111,0,13:111:4381:0,13:0,515:-9.3662,-42.7805,-403.238,0,-360.853,-356.94 0|0:91:88,0,3:88:3445:0,3:0,120:0,-26.4906,-309.703,-16.206,-299.818,-298.915 0|0:119:108,6,0:108:4211:6,0:235,0:0,-13.1893,-357.473,-32.5112,-359.279,-378.604 0|0:163:160,3,0:160:6214:3,0:119,0:0,-37.9729,-547.988,-48.1648,-548.891,-558.687 0|0:133:130,3,0:130:5145:3,0:123,0:0,-28.5722,-451.476,-39.1339,-452.379,-462.531 dDocent_Contig_4189 105 . A T 186.718 . AB=0.20339;ABP=48.096;AC=3;AF=0.25;AN=12;AO=12;CIGAR=1X;DP=103;DPB=103;DPRA=1.34091;EPP=29.068;EPPR=200.614;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.666667;PAIREDR=0.736264;PAO=0;PQA=0;PQR=0;PRO=0;QA=439;QR=3352;RO=91;RPL=0;RPP=29.068;RPPR=200.614;RPR=12;RUN=1;SAF=0;SAP=29.068;SAR=12;SRF=0;SRP=200.614;SRR=91;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:9:5,4:5:184:4:148:-10.9727,0,-14.2092 0/0:10:10,0:10:369:0:0:0,-3.0103,-33.5597 0/1:31:25,6:25:918:6:221:-10.9149,0,-73.6086 0/1:19:17,2:17:628:2:70:-0.927546,0,-51.1368 0/0:21:21,0:21:774:0:0:0,-6.32163,-69.9885 0/0:13:13,0:13:479:0:0:0,-3.91339,-43.4536 dDocent_Contig_4190 98 . N G 237.674 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=250;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:71:-6.62506,-0.90309,0 1/1:5:0,5:0:0:5:172:-15.8185,-1.50515,0 dDocent_Contig_4191 55 . A G 2857 . AB=0.109774;ABP=4509.3;AC=4;AF=0.333333;AN=12;AO=388;CIGAR=1X;DP=5574;DPB=5574;DPRA=0;EPP=845.542;EPPR=11249.1;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999614;PAO=0;PQA=0;PQR=0;PRO=0;QA=15185;QR=202118;RO=5179;RPL=388;RPP=845.542;RPPR=11249.1;RPR=0;RUN=1;SAF=388;SAP=845.542;SAR=0;SRF=5179;SRP=11249.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:779:689,90:689:26679:90:3508:-81.2742,0,-2164.52 0/1:963:855,107:855:33272:107:4174:-85.6768,0,-2701.78 0/1:756:664,91:664:26017:91:3592:-95.655,0,-2111.72 0/1:909:821,86:821:32200:86:3372:-30.3155,0,-2622.06 0/0:1185:1171,12:1171:45764:12:457:0,-314.771,-4073.34 0/0:982:979,2:979:38186:2:82:0,-287.721,-3425.85 dDocent_Contig_4192 15 . C T 131.641 . AB=0.0938628;ABP=796.734;AC=1;AF=0.0833333;AN=12;AO=142;CIGAR=1X;DP=3331;DPB=3331;DPRA=1.48038;EPP=311.359;EPPR=6847.71;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=59.9871;NS=6;NUMALT=1;ODDS=0;PAIRED=0.056338;PAIREDR=0.716437;PAO=0;PQA=0;PQR=0;PRO=0;QA=5560;QR=126608;RO=3188;RPL=0;RPP=311.359;RPPR=6925.66;RPR=142;RUN=1;SAF=142;SAP=311.359;SAR=0;SRF=3179;SRP=6847.71;SRR=9;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:585:544,41:544:21476:41:1614:0,-30.5952,-1785.57 0/0:767:740,27:740:29367:27:1048:0,-136.277,-2545.68 0/0:584:561,22:561:22361:22:884:0,-96.0388,-1930.7 0/1:554:502,52:502:19959:52:2014:-14.687,0,-1627.88 0/0:416:416,0:416:16621:0:0:0,-125.228,-1494.55 0/0:425:425,0:425:16824:0:0:0,-127.938,-1512.77 dDocent_Contig_4195 21 . T C 24598.5 . AB=0.343122;ABP=556.236;AC=6;AF=0.5;AN=12;AO=888;CIGAR=1X2M;DP=2588;DPB=2588;DPRA=0;EPP=1931.28;EPPR=3303.65;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.998684;PAO=0;PQA=0;PQR=0;PRO=0;QA=35549;QR=58788;RO=1520;RPL=0;RPP=1931.28;RPPR=3303.65;RPR=888;RUN=1;SAF=888;SAP=1931.28;SAR=0;SRF=1520;SRP=3303.65;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:369:172,37,160:172:6687:37,160:1432,6355:-471.352,-405.519,-943.876,0,-431.888,-501.335 0|1:474:268,58,148:268:10405:58,148:2321,5937:-408.475,-297.957,-1135.39,0,-663.695,-810.338 0|1:322:150,30,142:150:5802:30,142:1200,5668:-421.622,-367.933,-835.43,0,-377.677,-433.776 0|1:317:146,52,118:146:5671:52,118:2066,4725:-345.29,-219.156,-669.459,0,-295.869,-430.435 0|1:649:467,0,181:467:17962:0,181:0,7299:-461.044,-601.625,-2076.16,0,-1474.52,-1420.04 0|1:457:317,0,139:317:12261:0,139:0,5565:-363.29,-458.717,-1465.77,0,-1007.34,-965.5 dDocent_Contig_4196 30 . C T 231.035 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=2;CIGAR=12M1X;DP=178;DPB=176.692;DPRA=1.07547;EPP=7.35324;EPPR=346.103;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=6227;RO=158;RPL=0;RPP=7.35324;RPPR=346.103;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=158;SRP=346.103;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:22:18,4,0:18:699:4,0:157,0:-7.88563,0,-56.6135,-13.3042,-57.8177,-70.7305 0|0:38:36,0,2:36:1428:0,2:0,81:0,-10.8371,-128.379,-3.75341,-121.7,-121.098 0|0:50:45,4,0:45:1794:4,0:156,0:0,-0.564188,-147.303,-13.5463,-148.507,-161.329 0|0:39:38,1,0:38:1477:1,0:36,0:0,-8.14189,-129.597,-11.4391,-129.898,-132.834 0|0:12:5,6,0:5:197:6,0:239,0:-18.4395,0,-14.6542,-19.9446,-16.4604,-36.1685 0|0:17:16,1,0:16:632:1,0:41,0:0,-1.02294,-53.1233,-4.81648,-53.4244,-56.8093 dDocent_Contig_4197 84 . C T 229.492 . AB=0.3;ABP=16.9077;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=127;DPB=127;DPRA=1.15254;EPP=31.2394;EPPR=250.558;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=453;QR=3977;RO=114;RPL=13;RPP=31.2394;RPPR=250.558;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=114;SRP=250.558;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:15:8,7:8:270:7:240:-17.4198,0,-20.114 0/0:12:12,0:12:417:0:0:0,-3.61236,-37.8632 0/1:25:20,5:20:708:5:177:-8.75123,0,-56.5202 0/0:12:12,0:12:425:0:0:0,-3.61236,-38.5872 0/0:35:35,0:35:1215:0:0:0,-10.536,-109.656 0/0:28:27,1:27:942:1:36:0,-4.83056,-81.4977 dDocent_Contig_4198 17 . T C 385.348 . AB=0.23;ABP=66.3304;AC=5;AF=0.416667;AN=12;AO=23;CIGAR=1X3M1X2M1X;DP=116;DPB=116;DPRA=1.25;EPP=52.9542;EPPR=194.1;GTI=0;LEN=1;MEANALT=1.6;MQM=40;MQMR=7;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=874;QR=3393;RO=88;RPL=0;RPP=52.9542;RPPR=194.1;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=88;SRP=194.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:18:13,5,0:13:491:5,0:193,0:-11.2207,0,-2.83563,-15.1341,-4.34078,-19.1942 0|1:30:22,7,1:22:848:7,1:269,7:-14.2824,0,-5.14768,-20.8455,-7.15688,-27.5543 0|1:9:5,1,3:5:184:1,3:31,21:-1.00261,0,-1.358,-2.40568,-1.37123,-2.94995 0|0:16:16,0,0:16:622:0,0:0,0:0,-4.81648,-10.1466,-4.81648,-10.1466,-10.1466 0|1:17:13,3,1:13:502:3,1:117,7:-5.26292,0,-3.3941,-9.15718,-4.19989,-12.8904 0|1:26:19,7,0:19:746:7,0:264,0:-14.9394,0,-4.2093,-20.6589,-6.31651,-26.6966 dDocent_Contig_4199 98 . N G 83.9218 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:68:-6.45788,-0.60206,0 1/1:1:0,1:0:0:1:8:-0.799998,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:6:-0.599999,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_4200 31 . G A 132838 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=3878;CIGAR=1X;DP=4008;DPB=4008;DPRA=0;EPP=8423.98;EPPR=278.787;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999484;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=152603;QR=4854;RO=127;RPL=0;RPP=8423.98;RPPR=278.787;RPR=3878;RUN=1;SAF=3878;SAP=8423.98;SAR=0;SRF=127;SRP=278.787;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:591:16,575:16:594:575:22513:-1970.62,-124.129,0 1/1:682:28,654:28:1087:654:25667:-2209.82,-107.178,0 1/1:569:26,543:26:1012:543:21464:-1838.65,-79.9087,0 1/1:594:6,586:6:242:586:23061:-2051.47,-156.457,0 1/1:865:10,855:10:392:855:33722:-2996.41,-224.755,0 1/1:707:41,665:41:1527:665:26176:-2216.02,-75.2654,0 dDocent_Contig_4201 12 . A T 106.771 . AB=0.0988142;ABP=356.703;AC=1;AF=0.0833333;AN=12;AO=57;CIGAR=1X;DP=1648;DPB=1648;DPRA=1.04887;EPP=126.784;EPPR=3453.48;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2175;QR=60504;RO=1589;RPL=0;RPP=126.784;RPPR=3453.48;RPR=57;RUN=1;SAF=57;SAP=126.784;SAR=0;SRF=1589;SRP=3453.48;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:253:228,25:228:8712:25:975:-11.8989,0,-707.645 0/0:301:299,2:299:11409:2:78:0,-83.2067,-1018.93 0/0:324:314,10:314:11967:10:374:0,-63.5282,-1042.52 0/0:238:217,20:217:8262:20:748:0,-3.88219,-675.704 0/0:267:267,0:267:10102:0:0:0,-80.375,-908.838 0/0:265:264,0:264:10052:0:0:0,-79.4719,-903.96 dDocent_Contig_4202 54 . T A 36.421 . AB=0.138889;ABP=43.7857;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=203;DPB=203;DPRA=0.951923;EPP=18.2106;EPPR=428.619;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.714286;PAIREDR=0.591837;PAO=0;PQA=0;PQR=0;PRO=0;QA=227;QR=6728;RO=196;RPL=7;RPP=18.2106;RPPR=428.619;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=196;SRP=428.619;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:40,0:40:1369:0:0:0,-12.0412,-123.507 0/0:43:42,1:42:1442:1:18:0,-11.1443,-128.276 0/0:29:29,0:29:1012:0:0:0,-8.72987,-91.3938 0/0:35:35,0:35:1203:0:0:0,-10.536,-108.574 0/0:20:19,1:19:652:1:35:0,-2.52197,-55.5034 0/1:36:31,5:31:1050:5:174:-5.16487,0,-83.9676 dDocent_Contig_4203 1 . N G 77.8076 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_4204 134 . A C 1283.94 . AB=0.354286;ABP=35.2846;AC=4;AF=0.333333;AN=12;AO=67;CIGAR=1X;DP=242;DPB=242;DPRA=0;EPP=148.499;EPPR=383.018;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.80597;PAIREDR=0.897143;PAO=0;PQA=0;PQR=0;PRO=0;QA=2257;QR=6330;RO=175;RPL=0;RPP=148.499;RPPR=383.018;RPR=67;RUN=1;SAF=0;SAP=148.499;SAR=67;SRF=0;SRP=383.018;SRR=175;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:17,5:17:626:5:175:-9.4709,0,-50.0529 0/1:47:30,17:30:1098:17:524:-33.3047,0,-84.9772 0/0:39:36,3:36:1277:3:107:0,-1.758,-105.243 0/0:28:26,2:26:933:2:72:0,-1.59212,-77.4498 0/1:40:23,17:23:833:17:588:-41.2045,0,-63.2514 0/1:66:43,23:43:1563:23:791:-51.636,0,-121.087 dDocent_Contig_4205 16 . T A 7232.45 . AB=0.13423;ABP=4755.86;AC=5;AF=0.416667;AN=12;AO=613;CIGAR=1X;DP=4997;DPB=4997;DPRA=0;EPP=1334.12;EPPR=9511.89;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=24337;QR=173725;RO=4379;RPL=0;RPP=1334.12;RPPR=9511.89;RPR=613;RUN=1;SAF=613;SAP=1334.12;SAR=0;SRF=4379;SRP=9511.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:752:650,102:650:25752:102:4057:-138.736,0,-2089.12 0/0:907:841,64:841:33402:64:2518:0,-45.9971,-2776.44 0/1:733:645,86:645:25725:86:3413:-86.7661,0,-2092.51 0/1:794:665,128:665:26401:128:5120:-221.651,0,-2134.78 0/1:979:857,122:857:33926:122:4831:-139.991,0,-2755.59 0/1:832:721,111:721:28519:111:4398:-145.323,0,-2313.76 dDocent_Contig_4206 13 . G C 2413.78 . AB=0.722222;ABP=10.7311;AC=3;AF=0.75;AN=4;AO=75;CIGAR=1X;DP=81;DPB=81;DPRA=0;EPP=165.871;EPPR=16.0391;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=40;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3044;QR=243;RO=6;RPL=0;RPP=165.871;RPPR=16.0391;RPR=75;RUN=1;SAF=75;SAP=165.871;SAR=0;SRF=6;SRP=16.0391;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:18:5,13:5:204:13:526:-38.4654,0,-11.7702 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:63:1,62:1:39:62:2518:-204.612,-15.3188,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_4207 12 . C T 2981.67 . AB=0.290954;ABP=158.257;AC=4;AF=0.333333;AN=12;AO=121;CIGAR=1X;DP=751;DPB=751;DPRA=0.625275;EPP=265.758;EPPR=1371.04;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998413;PAO=0;PQA=0;PQR=0;PRO=0;QA=4831;QR=25083;RO=630;RPL=0;RPP=265.758;RPPR=1371.04;RPR=121;RUN=1;SAF=121;SAP=265.758;SAR=0;SRF=630;SRP=1371.04;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:69:26,43:26:1051:43:1707:-133.081,0,-74.1085 0/1:178:139,39:139:5513:39:1569:-87.8607,0,-442.42 0/1:64:48,16:48:1920:16:627:-37.4964,0,-153.72 0/1:98:77,21:77:3066:21:846:-46.951,0,-246.52 0/0:160:158,2:158:6319:2:82:0,-40.3851,-560.655 0/0:182:182,0:182:7214:0:0:0,-54.7875,-648.906 dDocent_Contig_4208 23 . G T 1337.2 . AB=0.279793;ABP=84.2999;AC=5;AF=0.416667;AN=12;AO=54;CIGAR=1M1X1M;DP=229;DPB=224.333;DPRA=0;EPP=120.27;EPPR=352.617;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.777778;PAIREDR=0.84472;PAO=0;PQA=0;PQR=0;PRO=0;QA=2167;QR=6339;RO=161;RPL=0;RPP=120.27;RPPR=352.617;RPR=54;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=161;SRP=352.617;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:22:16,0,6:16:618:0,6:0,241:-15.4434,-20.2599,-71.0025,0,-51.1397,-49.3335 0|1:41:20,9,12:20:784:9,12:359,483:-33.7883,-10.247,-72.0022,0,-34.9008,-60.854 0|1:58:42,0,16:42:1655:0,16:0,650:-41.3725,-54.0158,-190.155,0,-136.542,-131.726 0|1:33:21,1,11:21:828:1,11:41,440:-29.911,-32.8477,-100.661,0,-64.7186,-64.792 0|1:39:30,0,9:30:1193:0,9:0,353:-20.3872,-29.4181,-127.644,0,-98.6191,-95.9098 0|0:36:32,4,0:32:1261:4,0:161,0:-4.0384,0,-102.926,-13.6714,-104.131,-117.401 dDocent_Contig_4209 70 . C A 5785.76 . AB=0.226621;ABP=954.013;AC=4;AF=0.333333;AN=12;AO=332;CIGAR=1X;DP=2111;DPB=2111;DPRA=1.1339;EPP=723.939;EPPR=3861.72;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11397;QR=61740;RO=1777;RPL=332;RPP=723.939;RPPR=3861.72;RPR=0;RUN=1;SAF=332;SAP=723.939;SAR=0;SRF=1777;SRP=3861.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:317:249,68:249:8491:68:2305:-112.29,0,-668.825 0/1:410:308,101:308:10558:101:3454:-187.768,0,-826.893 0/1:386:289,97:289:10150:97:3366:-186.963,0,-797.25 0/1:352:286,66:286:10016:66:2272:-98.7769,0,-795.444 0/0:393:392,0:392:13599:0:0:0,-118.004,-1223.37 0/0:253:253,0:253:8926:0:0:0,-76.1606,-803.336 dDocent_Contig_4210 7 . C T 1196.94 . AB=0.168514;ABP=433.458;AC=4;AF=0.333333;AN=12;AO=89;CIGAR=1X;DP=709;DPB=709;DPRA=0;EPP=196.271;EPPR=1344.98;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993528;PAO=0;PQA=0;PQR=0;PRO=0;QA=3407;QR=23597;RO=618;RPL=0;RPP=196.271;RPPR=1344.98;RPR=89;RUN=1;SAF=89;SAP=196.271;SAR=0;SRF=618;SRP=1344.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:136:123,13:123:4738:13:503:-4.67818,0,-385.514 0/1:136:111,25:111:4271:25:962:-45.9539,0,-343.521 0/1:86:64,22:64:2467:22:837:-49.765,0,-196.342 0/0:97:92,4:92:3492:4:154:0,-14.8702,-300.211 0/0:161:151,9:151:5766:9:349:0,-16.7833,-487.133 0/1:93:77,16:77:2863:16:602:-26.5189,0,-229.849 dDocent_Contig_4211 21 . A C 1066.05 . AB=0.283784;ABP=63.1073;AC=1;AF=0.0833333;AN=12;AO=50;CIGAR=1X;DP=873;DPB=873;DPRA=0.994854;EPP=111.584;EPPR=1790.13;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.98;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1996;QR=32798;RO=823;RPL=0;RPP=111.584;RPPR=1790.13;RPR=50;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=823;SRP=1790.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:93:93,0:93:3735:0:0:0,-27.9958,-336.154 0/0:123:123,0:123:4832:0:0:0,-37.0267,-434.768 0/0:150:150,0:150:6025:0:0:0,-45.1545,-542.006 0/0:142:134,8:134:5374:8:302:0,-15.2195,-455.968 0/0:217:217,0:217:8652:0:0:0,-65.3235,-778.19 0/1:148:106,42:106:4180:42:1694:-108.128,0,-331.628 dDocent_Contig_4212 98 . N T 274.395 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=277;QR=0;RO=0;RPL=8;RPP=20.3821;RPPR=0;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:70:-6.64733,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:102:-9.51673,-0.90309,0 dDocent_Contig_4213 14 . T C 649.114 . AB=0.118353;ABP=740.585;AC=4;AF=0.333333;AN=12;AO=77;CIGAR=1X;DP=1029;DPB=1029;DPRA=0;EPP=170.214;EPPR=2070.25;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99895;PAO=0;PQA=0;PQR=0;PRO=0;QA=3039;QR=37004;RO=952;RPL=0;RPP=170.214;RPPR=2070.25;RPR=77;RUN=1;SAF=77;SAP=170.214;SAR=0;SRF=952;SRP=2070.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:134:116,18:116:4498:18:724:-25.1473,0,-364.474 0/1:209:190,19:190:7371:19:760:-5.80633,0,-600.223 0/1:116:101,15:101:3893:15:592:-18.6942,0,-315.504 0/1:124:107,17:107:4105:17:661:-22.4854,0,-332.161 0/0:234:228,6:228:8964:6:223:0,-50.0223,-785.904 0/0:212:210,2:210:8173:2:79:0,-56.3211,-727.714 dDocent_Contig_4214 98 . N A 460.408 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=15;CIGAR=2X;DP=15;DPB=31;DPRA=0;EPP=35.5824;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=17;PQA=504;PQR=0;PRO=0;QA=508;QR=0;RO=0;RPL=15;RPP=35.5824;RPPR=0;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:6:0,6:0:0:6:207:-18.6458,-1.80618,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:9:0,9:0:0:9:301:-27.0939,-2.70927,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_4215 12 . T G 323.185 . AB=0.061086;ABP=1482.21;AC=1;AF=0.0833333;AN=12;AO=151;CIGAR=1M1D3M1X;DP=2544;DPB=2507.5;DPRA=0;EPP=330.903;EPPR=5021.28;GTI=0;LEN=1;MEANALT=3.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5828;QR=88495;RO=2311;RPL=0;RPP=330.903;RPPR=5021.28;RPR=151;RUN=1;SAF=151;SAP=330.903;SAR=0;SRF=2311;SRP=5021.28;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:327:314,0,12:314:12034:0,12:0,452:0,-94.5234,-1082.19,-57.4975,-1045.15,-1041.54 0|0:368:331,33,2:331:12672:33,2:1278,78:-5.35987,0,-1029.99,-98.5887,-1033.52,-1137.89 0|0:409:363,21,24:363:13968:21,24:820,922:0,-41.8617,-1182.34,-33.5907,-1112.98,-1173.16 0|0:367:329,11,24:329:12626:11,24:437,917:0,-63.053,-1096.13,-23.7991,-1024.2,-1052.96 0|0:557:519,0,37:519:19805:0,37:0,1426:0,-156.235,-1781.02,-39.1484,-1663.93,-1652.79 0|1:516:455,3,52:455:17390:3,52:118,2033:-30.1805,-157.442,-1583.41,0,-1417.16,-1411.21 dDocent_Contig_4216 1 . N G 116.915 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=118;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:80:-7.59157,-0.60206,0 1/1:1:0,1:0:0:1:38:-3.79727,-0.30103,0 dDocent_Contig_4217 98 . N G 163.715 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=171;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:102:-9.51695,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 dDocent_Contig_4218 36 . C T 56.5627 . AB=0.123457;ABP=102.764;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=566;DPB=566;DPRA=0.659824;EPP=35.5824;EPPR=1195.15;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=508;QR=21490;RO=549;RPL=0;RPP=35.5824;RPPR=1195.15;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=549;SRP=1195.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:57:53,3:53:2084:3:100:0,-7.67839,-178.464 0/0:87:85,2:85:3300:2:61:0,-20.3968,-291.273 0/0:146:145,0:145:5730:0:0:0,-43.6493,-515.422 0/1:81:71,10:71:2782:10:347:-7.17915,0,-226.123 0/0:91:91,0:91:3555:0:0:0,-27.3937,-319.993 0/0:104:104,0:104:4039:0:0:0,-31.3071,-363.509 dDocent_Contig_4219 21 . T A 1831.49 . AB=0.104881;ABP=3364.62;AC=3;AF=0.25;AN=12;AO=327;CIGAR=1X;DP=5421;DPB=5421;DPRA=0;EPP=713.082;EPPR=10814.8;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993573;PAO=0;PQA=0;PQR=0;PRO=0;QA=12914;QR=192322;RO=4979;RPL=0;RPP=713.082;RPPR=10814.8;RPR=327;RUN=1;SAF=327;SAP=713.082;SAR=0;SRF=4979;SRP=10814.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:880:781,84:781:30080:84:3347:-40.5011,0,-2444.21 0/1:1127:992,122:992:38467:122:4778:-94.2085,0,-3123.35 0/1:472:411,54:411:15910:54:2154:-53.6611,0,-1290.54 0/0:807:727,54:727:28002:54:2107:0,-45.6882,-2328.31 0/0:1013:967,10:967:37332:10:407:0,-257.519,-3320.02 0/0:1122:1101,3:1101:42531:3:121:0,-321.458,-3813.13 dDocent_Contig_4220 24 . C T 2645.88 . AB=0.186667;ABP=642.581;AC=6;AF=0.5;AN=12;AO=140;CIGAR=1X;DP=750;DPB=750;DPRA=0;EPP=307.016;EPPR=1325.44;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99179;PAO=0;PQA=0;PQR=0;PRO=0;QA=5533;QR=24393;RO=609;RPL=0;RPP=307.016;RPPR=1325.44;RPR=140;RUN=1;SAF=140;SAP=307.016;SAR=0;SRF=609;SRP=1325.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:104:88,16:88:3516:16:616:-24.4564,0,-285.158 0/1:143:117,26:117:4741:26:1046:-51.3831,0,-383.523 0/1:83:63,20:63:2511:20:808:-48.0518,0,-201.13 0/1:107:98,9:98:3917:9:355:-0.101027,0,-320.309 0/1:151:107,44:107:4290:44:1728:-110.286,0,-340.584 0/1:162:136,25:136:5418:25:980:-39.6319,0,-438.595 dDocent_Contig_4221 63 . A G 400.517 . AB=0.121896;ABP=553.108;AC=1;AF=0.0833333;AN=12;AO=109;CIGAR=1X;DP=2866;DPB=2866;DPRA=0.630126;EPP=239.701;EPPR=5987.59;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3974;QR=106955;RO=2756;RPL=109;RPP=239.701;RPPR=5987.59;RPR=0;RUN=1;SAF=109;SAP=239.701;SAR=0;SRF=2756;SRP=5987.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:408:404,4:404:15397:4:133:0,-110.523,-1372.71 0/1:443:389,54:389:14894:54:1941:-41.5745,0,-1206.37 0/0:409:388,21:388:15353:21:786:0,-52.0708,-1309.55 0/0:338:308,30:308:12195:30:1114:0,-1.18682,-996.167 0/0:702:701,0:701:26646:0:0:0,-211.022,-2396.56 0/0:566:566,0:566:22470:0:0:0,-170.383,-2020.4 dDocent_Contig_4222 98 . N T 357.297 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=15;CIGAR=1X;DP=16;DPB=16;DPRA=0;EPP=35.5824;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=374;QR=0;RO=0;RPL=15;RPP=35.5824;RPPR=0;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:107:-9.89479,-1.20412,0 1/1:3:0,2:0:0:2:40:-3.69919,-0.60206,0 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 1/1:2:0,2:0:0:2:50:-4.74916,-0.60206,0 1/1:5:0,5:0:0:5:138:-12.6937,-1.50515,0 dDocent_Contig_4223 33 . C T 710.039 . AB=0.227586;ABP=96.4735;AC=3;AF=0.25;AN=12;AO=35;CIGAR=1X;DP=285;DPB=285;DPRA=0.819444;EPP=79.0118;EPPR=545.878;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.657143;PAIREDR=0.72;PAO=0;PQA=0;PQR=0;PRO=0;QA=1402;QR=9931;RO=250;RPL=0;RPP=79.0118;RPPR=545.878;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=250;SRP=545.878;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:29,12:29:1154:12:474:-30.6665,0,-91.7983 0/1:52:47,5:47:1877:5:200:-2.72547,0,-153.486 0/1:52:36,16:36:1426:16:646:-42.8204,0,-112.94 0/0:32:30,2:30:1147:2:82:0,-1.85328,-95.7195 0/0:46:46,0:46:1841:0:0:0,-13.8474,-165.901 0/0:62:62,0:62:2486:0:0:0,-18.6639,-223.884 dDocent_Contig_4224 98 . N T 95.1727 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=102;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:102:-9.51673,-0.90309,0 dDocent_Contig_4225 8 . A T 17536.6 . AB=0.0353535;ABP=374.31;AC=0;AF=0;AN=12;AO=7;CIGAR=1X3M1X3M;DP=709;DPB=709;DPRA=0;EPP=18.2106;EPPR=270.101;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=279;QR=4818;RO=123;RPL=0;RPP=18.2106;RPPR=270.101;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=123;SRP=270.101;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:103:18,0,10,75:18:710:0,10,75:0,400,3041:-245.358,-250.777,-309.192,-217.827,-276.243,-273.232,0,-58.4139,-25.4618,-35.8366 0|0:175:41,0,1,130:41:1601:0,1,130:0,40,5201:-416.092,-428.434,-560.044,-425.139,-556.749,-556.448,0,-131.64,-128.345,-92.506 0|0:86:8,0,14,63:8:320:0,14,63:0,555,2489:-221.687,-224.096,-250.457,-178.415,-204.776,-200.561,-19.3164,-45.6779,0,-26.7131 0|0:147:25,0,6,116:25:979:0,6,116:0,237,4680:-378.249,-385.775,-466.271,-366.274,-446.771,-444.964,0,-80.4958,-60.9942,-45.5763 0|0:105:11,1,4,89:11:430:1,4,89:40,154,3578:-291.551,-291.567,-326.617,-282.22,-314.275,-316.366,0,-32.0575,-22.7119,-8.56156 0|0:93:20,6,0,67:20:778:6,0,67:239,0,2649:-211.942,-198.282,-260.41,-217.963,-262.216,-281.897,0,-44.2453,-63.9287,-43.7597 dDocent_Contig_4226 77 . C A 6310.07 . AB=0.259542;ABP=595.126;AC=4;AF=0.333333;AN=12;AO=366;CIGAR=1X;DP=1939;DPB=1939;DPRA=0;EPP=797.769;EPPR=3418.74;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9917;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996821;PAO=0;PQA=0;PQR=0;PRO=0;QA=13196;QR=56611;RO=1573;RPL=366;RPP=797.769;RPPR=3418.74;RPR=0;RUN=1;SAF=366;SAP=797.769;SAR=0;SRF=1573;SRP=3418.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:380:354,26:354:12707:26:945:0,-29.0242,-1058.01 0/0:380:346,34:346:12410:34:1226:0,-3.74952,-1006.03 0/1:357:321,36:321:11574:36:1298:-9.65062,0,-933.975 0/1:253:225,28:225:8118:28:986:-12.8857,0,-654.411 0/1:321:172,149:172:6189:149:5403:-389.731,0,-460.399 0/1:248:155,93:155:5613:93:3338:-225.961,0,-430.598 dDocent_Contig_4227 39 . C A 16774.6 . AB=0.381832;ABP=167.234;AC=8;AF=0.666666;AN=12;AO=517;CIGAR=3M1X;DP=1354;DPB=1354;DPRA=0;EPP=1125.66;EPPR=1386.24;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.990329;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=20339;QR=25313;RO=637;RPL=0;RPP=1125.66;RPPR=1386.24;RPR=517;RUN=1;SAF=517;SAP=1125.66;SAR=0;SRF=637;SRP=1386.24;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:179:46,16,1,115:46:1840:16,1,115:629,41,4537:-359.413,-321.525,-468.276,-369.876,-469.708,-521.143,0,-99.8394,-148.19,-116.955 1|1:209:19,44,0,144:19:760:44,0,144:1755,0,5719:-546.982,-408.169,-457.53,-552.702,-470.775,-615.307,-81.9248,0,-144.531,-101.182 0|1:79:18,6,6,48:18:693:6,6,48:243,238,1854:-146.805,-132.185,-187.263,-132.631,-169.477,-187.71,0,-36.8358,-37.2835,-42.427 1|1:183:8,12,15,147:8:321:12,15,147:485,584,5751:-491.907,-454.329,-477.166,-446.319,-432.783,-468.254,-21.5411,-8.0023,0,-3.74077 0|1:368:266,65,0,37:266:10554:65,0,37:2595,0,1441:-133.658,0,-849.192,-213.732,-868.759,-1082.49,-95.3274,-750.352,-964.078,-952.94 0|1:336:280,29,0,26:280:11145:29,0,26:1145,0,1037:-9.91956,0,-908.913,-94.208,-917.643,-1011.85,-8.80692,-832.246,-926.453,-918.626 dDocent_Contig_4228 205 . T C 157.459 . AB=0.227273;ABP=31.4368;AC=3;AF=0.25;AN=12;AO=13;CIGAR=1X;DP=116;DPB=116;DPRA=2.02174;EPP=31.2394;EPPR=226.672;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=479;QR=3760;RO=103;RPL=13;RPP=31.2394;RPPR=226.672;RPR=0;RUN=1;SAF=0;SAP=31.2394;SAR=13;SRF=0;SRP=226.672;SRR=103;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5045 0/1:22:16,6:16:573:6:220:-13.5328,0,-45.2799 0/0:49:46,3:46:1689:3:111:0,-4.39655,-141.937 0/0:14:14,0:14:516:0:0:0,-4.21442,-46.7817 0/1:13:11,2:11:403:2:74:-3.11249,0,-32.7027 0/1:9:7,2:7:255:2:74:-4.31661,0,-20.5926 dDocent_Contig_4229 1 . N G 75.9287 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=80;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:80:-7.59179,-0.60206,0 dDocent_Contig_4230 38 . G A 122.789 . AB=0.175;ABP=39.7082;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=149;DPB=149;DPRA=1.87013;EPP=22.5536;EPPR=307.016;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.664286;PAO=0;PQA=0;PQR=0;PRO=0;QA=365;QR=5559;RO=140;RPL=0;RPP=22.5536;RPPR=307.016;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=140;SRP=307.016;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:722:0:0:0,-5.41854,-65.3057 0/0:13:13,0:13:514:0:0:0,-3.91339,-46.6034 0/0:19:19,0:19:764:0:0:0,-5.71957,-69.0815 0/1:40:33,7:33:1309:7:283:-13.8018,0,-106.039 0/0:32:30,2:30:1164:2:82:0,-1.85328,-97.2516 0/0:27:27,0:27:1086:0:0:0,-8.12781,-98.0281 dDocent_Contig_4231 35 . G A 32.2721 . AB=0.136364;ABP=28.2783;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=258;DPB=258;DPRA=1.08982;EPP=16.0391;EPPR=550.221;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.900794;PAO=0;PQA=0;PQR=0;PRO=0;QA=228;QR=9950;RO=252;RPL=0;RPP=16.0391;RPPR=550.221;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=252;SRP=550.221;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:870:0:0:0,-6.62266,-78.6064 0/1:22:19,3:19:762:3:122:-4.74983,0,-62.2793 0/0:34:34,0:34:1348:0:0:0,-10.235,-121.579 0/0:36:36,0:36:1446:0:0:0,-10.8371,-130.391 0/0:75:75,0:75:2908:0:0:0,-22.5772,-261.825 0/0:69:66,3:66:2616:3:106:0,-10.888,-225.687 dDocent_Contig_4232 107 . N T 46.5542 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=49;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:49:-4.65433,-0.60206,0 dDocent_Contig_4233 24 . C T 496.159 . AB=0.190789;ABP=129.241;AC=2;AF=0.166667;AN=12;AO=33;CIGAR=1X;DP=456;DPB=456;DPRA=1.0177;EPP=74.6689;EPPR=921.543;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.909091;PAIREDR=0.907801;PAO=0;PQA=0;PQR=0;PRO=0;QA=1237;QR=16811;RO=423;RPL=0;RPP=74.6689;RPPR=921.543;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=423;SRP=921.543;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:71:71,0:71:2800:0:0:0,-21.3731,-252.117 0/0:83:83,0:83:3285:0:0:0,-24.9855,-295.722 0/0:78:74,4:74:2977:4:149:0,-9.70738,-254.236 0/0:72:72,0:72:2867:0:0:0,-21.6742,-258.136 0/1:82:61,21:61:2402:21:787:-46.4642,0,-191.659 0/1:70:62,8:62:2480:8:301:-6.37349,0,-202.27 dDocent_Contig_4234 15 . C T 841.488 . AB=0.136161;ABP=518.134;AC=1;AF=0.0833333;AN=12;AO=132;CIGAR=1X;DP=3448;DPB=3448;DPRA=0.793323;EPP=289.645;EPPR=7168.89;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998792;PAO=0;PQA=0;PQR=0;PRO=0;QA=5286;QR=132437;RO=3312;RPL=0;RPP=289.645;RPPR=7194.93;RPR=132;RUN=1;SAF=132;SAP=289.645;SAR=0;SRF=3309;SRP=7168.89;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:483:454,29:454:18224:29:1184:0,-38.5671,-1531.79 0/1:448:385,61:385:15411:61:2445:-85.6717,0,-1251.24 0/0:265:265,0:265:10629:0:0:0,-79.7729,-955.887 0/0:439:406,31:406:16229:31:1223:0,-21.4747,-1348.97 0/0:1068:1068,0:1068:42554:0:0:0,-321.5,-3825.8 0/0:745:734,11:734:29390:11:434:0,-184.856,-2602.97 dDocent_Contig_4235 16 . T C 314.64 . AB=0.0945802;ABP=1346.44;AC=2;AF=0.166667;AN=12;AO=176;CIGAR=1X;DP=3188;DPB=3188;DPRA=0;EPP=385.189;EPPR=6539.14;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6982;QR=120162;RO=3010;RPL=0;RPP=385.189;RPPR=6539.14;RPR=176;RUN=1;SAF=176;SAP=385.189;SAR=0;SRF=3010;SRP=6539.14;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:426:389,37:389:15605:37:1444:-1.96966,0,-1274.97 0/1:515:461,52:461:18378:52:2084:-32.9242,0,-1497.71 0/0:471:442,29:442:17612:29:1137:0,-39.1781,-1481.03 0/0:454:433,21:433:17259:21:831:0,-61.5635,-1476.81 0/0:707:685,22:685:27366:22:877:0,-133.597,-2381.25 0/0:615:600,15:600:23942:15:609:0,-129.985,-2097.54 dDocent_Contig_4236 1 . N G 68.3633 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=72;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:72:-6.83524,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_4237 60 . G A 2585.67 . AB=0.298851;ABP=125.312;AC=5;AF=0.416667;AN=12;AO=107;CIGAR=1X;DP=394;DPB=394;DPRA=0;EPP=235.358;EPPR=626.223;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.841121;PAIREDR=0.752613;PAO=0;PQA=0;PQR=0;PRO=0;QA=4241;QR=11022;RO=287;RPL=107;RPP=235.358;RPPR=626.223;RPR=0;RUN=1;SAF=107;SAP=235.358;SAR=0;SRF=287;SRP=626.223;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:73:41,32:41:1580:32:1245:-90.3493,0,-120.465 0/1:71:49,22:49:1833:22:862:-56.5053,0,-143.809 0/1:82:63,19:63:2412:19:768:-44.757,0,-192.545 0/1:55:37,18:37:1429:18:724:-48.9307,0,-112.308 0/1:67:54,13:54:2121:13:523:-27.247,0,-170.901 0/0:46:43,3:43:1647:3:119:0,-2.75237,-137.368 dDocent_Contig_4238 7 . C A 5634.77 . AB=0.145763;ABP=3218.34;AC=5;AF=0.416667;AN=12;AO=469;CIGAR=1X;DP=3504;DPB=3504;DPRA=0;EPP=1021.43;EPPR=6563.05;GTI=0;LEN=1;MEANALT=1.33333;MQM=58.8188;MQMR=59.9199;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997868;PAIREDR=0.995054;PAO=0;PQA=0;PQR=0;PRO=0;QA=17767;QR=116015;RO=3033;RPL=0;RPP=1021.43;RPPR=6589.09;RPR=469;RUN=1;SAF=469;SAP=1021.43;SAR=0;SRF=3030;SRP=6563.05;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:437:381,56:381:14570:56:2127:-57.0197,0,-1179.08 0/1:623:533,90:533:20468:90:3412:-117.379,0,-1649.06 0/0:554:514,39:514:19583:39:1461:0,-37.6446,-1632.2 0/1:486:439,47:439:16817:47:1813:-17.0631,0,-1366.37 0/1:823:698,124:698:26728:124:4682:-171.698,0,-2156.13 0/1:581:468,113:468:17849:113:4272:-209.539,0,-1430.54 dDocent_Contig_4239 7 . C T 2582.24 . AB=0.368613;ABP=44.0939;AC=5;AF=0.416667;AN=12;AO=101;CIGAR=1X;DP=294;DPB=294;DPRA=2.74;EPP=222.329;EPPR=422.104;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.989637;PAO=0;PQA=0;PQR=0;PRO=0;QA=3870;QR=7430;RO=193;RPL=0;RPP=222.329;RPPR=422.104;RPR=101;RUN=1;SAF=101;SAP=222.329;SAR=0;SRF=193;SRP=422.104;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:29:24,5:24:929:5:189:-8.64552,0,-75.1951 0/1:32:14,18:14:541:18:685:-52.348,0,-39.4029 0/1:19:15,4:15:572:4:153:-8.42204,0,-46.1003 0/0:20:20,0:20:760:0:0:0,-6.0206,-68.7273 0/1:111:73,38:73:2806:38:1456:-97.9032,0,-219.302 0/1:83:47,36:47:1822:36:1387:-100.127,0,-139.243 dDocent_Contig_4240 66 . T G 6528.4 . AB=0.265907;ABP=504.22;AC=6;AF=0.5;AN=12;AO=280;CIGAR=1X;DP=1053;DPB=1053;DPRA=0;EPP=611.023;EPPR=1681.56;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10886;QR=30546;RO=773;RPL=280;RPP=611.023;RPPR=1681.56;RPR=0;RUN=1;SAF=280;SAP=611.023;SAR=0;SRF=773;SRP=1681.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:131:101,30:101:3998:30:1196:-68.4836,0,-320.374 0/1:140:115,25:115:4508:25:970:-45.4486,0,-363.524 0/1:212:151,61:151:6024:61:2369:-149.557,0,-478.098 0/1:97:67,30:67:2662:30:1180:-77.2784,0,-210.505 0/1:274:203,71:203:8057:71:2731:-163.437,0,-642.227 0/1:199:136,63:136:5297:63:2440:-159.857,0,-416.684 dDocent_Contig_4241 37 . C G 1013.51 . AB=0.287671;ABP=60.1825;AC=4;AF=0.333333;AN=12;AO=44;CIGAR=1X;DP=205;DPB=205;DPRA=1.21379;EPP=98.5551;EPPR=352.617;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.681818;PAIREDR=0.900621;PAO=0;PQA=0;PQR=0;PRO=0;QA=1758;QR=6482;RO=161;RPL=0;RPP=98.5551;RPPR=352.617;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=161;SRP=352.617;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:22,12:22:876:12:481:-33.4038,0,-68.9117 0/1:36:27,9:27:1089:9:356:-21.5626,0,-87.4594 0/1:41:31,10:31:1244:10:410:-24.9183,0,-99.8853 0/1:35:24,11:24:966:11:432:-28.6882,0,-76.7024 0/0:29:29,0:29:1178:0:0:0,-8.72987,-106.294 0/0:30:28,2:28:1129:2:79:0,-1.53366,-94.3927 dDocent_Contig_4243 14 . G A 22247.3 . AB=0.725773;ABP=432.478;AC=6;AF=0.5;AN=12;AO=704;CIGAR=1X;DP=970;DPB=970;DPRA=0;EPP=1531.73;EPPR=580.622;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.988722;PAO=0;PQA=0;PQR=0;PRO=0;QA=28094;QR=10566;RO=266;RPL=0;RPP=1531.73;RPPR=580.622;RPR=704;RUN=1;SAF=704;SAP=1531.73;SAR=0;SRF=266;SRP=580.622;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:131:27,104:27:1071:104:4165:-335.373,0,-57.2451 0/1:233:53,180:53:2083:180:7156:-573.567,0,-117.511 0/1:127:69,58:69:2730:58:2348:-173.237,0,-207.585 0/1:187:57,130:57:2275:130:5176:-409.414,0,-148.627 0/1:182:25,157:25:998:157:6248:-507.292,0,-35.3271 0/1:110:35,75:35:1409:75:3001:-237.069,0,-93.946 dDocent_Contig_4244 106 . N C 64.5902 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=2X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=68;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_4245 80 . G A 14091.4 . AB=0.484767;ABP=5.2596;AC=6;AF=0.5;AN=12;AO=541;CIGAR=1X;DP=1116;DPB=1116;DPRA=0;EPP=1177.78;EPPR=1251.61;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=19501;QR=20304;RO=575;RPL=541;RPP=1177.78;RPPR=1251.61;RPR=0;RUN=1;SAF=541;SAP=1177.78;SAR=0;SRF=575;SRP=1251.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:128:79,49:79:2751:49:1759:-120.061,0,-209.304 0/1:183:122,61:122:4267:61:2164:-139.938,0,-329.127 0/1:222:105,117:105:3793:117:4207:-311.952,0,-274.723 0/1:162:89,73:89:3130:73:2697:-194.175,0,-233.143 0/1:231:78,153:78:2771:153:5505:-426.015,0,-180.087 0/1:190:102,88:102:3592:88:3169:-228.225,0,-266.278 dDocent_Contig_4246 24 . A T 32.2026 . AB=0.0987654;ABP=116.275;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=237;DPB=237;DPRA=0.862069;EPP=24.725;EPPR=495.935;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.488987;PAO=0;PQA=0;PQR=0;PRO=0;QA=403;QR=9067;RO=227;RPL=0;RPP=24.725;RPPR=495.935;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=227;SRP=495.935;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:35,1:35:1397:1:41:0,-6.74251,-121.89 0/0:33:32,1:32:1260:1:41:0,-5.83942,-109.573 0/0:45:45,0:45:1806:0:0:0,-13.5463,-162.751 0/0:42:42,0:42:1682:0:0:0,-12.6433,-151.604 0/1:36:33,3:33:1298:3:122:-0.535413,0,-106.246 0/1:45:40,5:40:1624:5:199:-4.7404,0,-132.837 dDocent_Contig_4247 9 . A G 1593.37 . AB=0.185185;ABP=444.623;AC=5;AF=0.416667;AN=12;AO=102;CIGAR=1X;DP=603;DPB=603;DPRA=0;EPP=224.5;EPPR=1090.92;GTI=0;LEN=1;MEANALT=1;MQM=55.5;MQMR=59.9401;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.509804;PAIREDR=0.848303;PAO=0;PQA=0;PQR=0;PRO=0;QA=3867;QR=19200;RO=501;RPL=0;RPP=224.5;RPPR=1090.92;RPR=102;RUN=1;SAF=102;SAP=224.5;SAR=0;SRF=501;SRP=1090.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:63:53,10:53:2023:10:387:-15.8932,0,-163.34 0/1:138:106,32:106:4068:32:1229:-68.6202,0,-324.539 0/1:134:113,21:113:4343:21:788:-30.787,0,-350.599 0/1:82:67,15:67:2563:15:556:-25.4987,0,-206.183 0/0:90:83,7:83:3173:7:270:0,-2.48647,-261.117 0/1:96:79,17:79:3030:17:637:-27.7601,0,-243.961 dDocent_Contig_4248 98 . N C 339.725 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=11;CIGAR=1X;DP=11;DPB=11;DPRA=0;EPP=26.8965;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=3.38813e-21;PAIRED=0.909091;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=353;QR=0;RO=0;RPL=11;RPP=26.8965;RPPR=0;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:135:-12.4835,-1.20412,0 1/1:1:0,1:0:0:1:23:-2.29991,-0.30103,0 1/1:1:0,1:0:0:1:27:-2.69978,-0.30103,0 1/1:3:0,3:0:0:3:100:-9.3306,-0.90309,0 1/1:2:0,2:0:0:2:68:-6.45788,-0.60206,0 dDocent_Contig_4249 9 . A G 1151.45 . AB=0.204545;ABP=236.542;AC=4;AF=0.333333;AN=12;AO=63;CIGAR=1X;DP=427;DPB=427;DPRA=1.29412;EPP=139.813;EPPR=791.255;GTI=0;LEN=1;MEANALT=1;MQM=59.619;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.920635;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2379;QR=13916;RO=363;RPL=0;RPP=139.813;RPPR=791.255;RPR=63;RUN=1;SAF=63;SAP=139.813;SAR=0;SRF=363;SRP=791.255;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:27,8:27:1033:8:311:-17.4444,0,-82.7433 0/0:93:92,0:92:3535:0:0:0,-27.6948,-317.884 0/0:26:26,0:26:1001:0:0:0,-7.82678,-90.402 0/1:79:63,16:63:2435:16:602:-30.7361,0,-195.572 0/1:64:44,20:44:1674:20:739:-47.5605,0,-131.654 0/1:130:111,19:111:4238:19:727:-26.6259,0,-342.368 dDocent_Contig_4250 209 . N G 113.273 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=114;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 1/1:2:0,2:0:0:2:73:-6.93007,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_4251 51 . G A 432.823 . AB=0.212389;ABP=84.2003;AC=5;AF=0.416667;AN=12;AO=24;CIGAR=1X;DP=168;DPB=168;DPRA=0.410909;EPP=55.1256;EPPR=315.702;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.986111;PAO=0;PQA=0;PQR=0;PRO=0;QA=927;QR=5665;RO=144;RPL=24;RPP=55.1256;RPPR=315.702;RPR=0;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=144;SRP=315.702;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:21,4:21:825:4:156:-6.89069,0,-67.0382 0/1:20:14,6:14:562:6:226:-14.6772,0,-44.9029 0/1:11:10,1:10:402:1:41:-0.783237,0,-33.2282 0/1:18:11,7:11:448:7:264:-18.6964,0,-35.2574 0/0:55:55,0:55:2146:0:0:0,-16.5566,-193.325 0/1:39:33,6:33:1282:6:240:-10.2355,0,-103.905 dDocent_Contig_4252 12 . A C 17006.1 . AB=0.2302;ABP=2054.7;AC=6;AF=0.5;AN=12;AO=747;CIGAR=1X;DP=3245;DPB=3245;DPRA=0;EPP=1625.1;EPPR=5423.01;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998661;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=29885;QR=99423;RO=2496;RPL=0;RPP=1625.1;RPPR=5423.01;RPR=747;RUN=1;SAF=747;SAP=1625.1;SAR=0;SRF=2496;SRP=5423.01;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:377:323,53:323:12836:53:2126:-77.9285,0,-1040.74 0/1:659:560,99:560:22355:99:3963:-158.261,0,-1811.66 0/1:417:381,36:381:15156:36:1419:-2.43289,0,-1237.35 0/1:456:351,105:351:14031:105:4182:-239.067,0,-1124.47 0/1:811:545,265:545:21676:265:10592:-708.305,0,-1704.76 0/1:525:336,189:336:13369:189:7603:-525.812,0,-1044.21 dDocent_Contig_4253 98 . N C 225.328 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=228;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:67:-6.36314,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:2:0,2:0:0:2:18:-1.70999,-0.60206,0 1/1:2:0,2:0:0:2:54:-5.12954,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:54:-5.12954,-0.60206,0 dDocent_Contig_4254 14 . T C 14460.6 . AB=0.276074;ABP=925.913;AC=2;AF=0.166667;AN=12;AO=646;CIGAR=1X;DP=5271;DPB=5271;DPRA=0;EPP=1405.78;EPPR=10041.7;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999784;PAO=0;PQA=0;PQR=0;PRO=0;QA=25603;QR=177172;RO=4623;RPL=0;RPP=1405.78;RPPR=10041.7;RPR=646;RUN=1;SAF=646;SAP=1405.78;SAR=0;SRF=4623;SRP=10041.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:722:720,1:720:27357:1:40:0,-213.442,-2456.32 0/0:979:948,31:948:36489:31:1217:0,-184.913,-3171.57 0/0:735:716,19:716:27644:19:741:0,-154.253,-2419.03 0/0:716:705,10:705:26978:10:397:0,-179.407,-2390.11 0/1:1103:770,333:770:29392:333:13203:-855.308,0,-2311.2 0/1:1016:764,252:764:29312:252:10005:-593.971,0,-2330.24 dDocent_Contig_4255 4 . G T 3389.35 . AB=0.208333;ABP=56.2114;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X2M1X;DP=138;DPB=349.75;DPRA=1.09091;EPP=35.5824;EPPR=0;GTI=0;LEN=1;MEANALT=3.66667;MQM=59.6;MQMR=0;NS=6;NUMALT=4;ODDS=0;PAIRED=0;PAIREDR=0;PAO=527;PQA=18089;PQR=2137.75;PRO=63.5;QA=491;QR=0;RO=0;RPL=0;RPP=35.5824;RPPR=0;RPR=15;RUN=1;SAF=0;SAP=35.5824;SAR=15;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:16:0,1,6,0,9:0:0:1,6,0,9:35,204,0,281:-39.0963,-36.2487,-35.9476,-22.55,-19.7024,-20.7439,-39.0963,-36.2487,-22.55,-39.0963,-16.5456,-13.6981,0,-16.5456,-13.8364 0|0:47:0,6,5,4,30:0:0:6,5,4,30:191,150,140,1024:-98.0438,-83.0666,-81.2604,-86.0552,-71.0781,-84.55,-86.653,-71.6759,-74.6645,-85.4489,-14.9767,0,-2.98855,-3.58605,-5.9458 1|0:9:0,0,4,0,5:0:0:0,4,0,5:0,137,0,175:-25.358,-25.358,-25.358,-14.2375,-14.2375,-13.0334,-25.358,-25.358,-14.2375,-25.358,-11.1203,-11.1203,0,-11.1203,-9.61516 0|0:31:0,1,0,0,30:0:0:1,0,0,30:34,0,0,1031:-92.7299,-89.9721,-89.671,-92.7299,-89.9721,-92.7299,-92.7299,-89.9721,-92.7299,-92.7299,-9.0309,-6.27321,-9.0309,-9.0309,0 0|0:9:0,0,0,0,9:0:0:0,0,0,9:0,0,0,273:-24.3667,-24.3667,-24.3667,-24.3667,-24.3667,-24.3667,-24.3667,-24.3667,-24.3667,-24.3667,-2.70927,-2.70927,-2.70927,-2.70927,0 0|0:26:0,3,0,0,21:0:0:3,0,0,21:80,0,0,718:-64.5619,-58.2687,-57.3656,-64.5619,-58.2687,-64.5619,-64.5619,-58.2687,-64.5619,-64.5619,-6.32163,-0.0288748,-6.32163,-6.32163,0 dDocent_Contig_4256 107 . N A 151.065 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=148;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:59:-5.60384,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:25:-2.49986,-0.30103,0 dDocent_Contig_4257 81 . T C 146.451 . AB=0.175439;ABP=55.1637;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=197;DPB=197;DPRA=1.19828;EPP=35.5824;EPPR=398.218;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.533333;PAIREDR=0.730769;PAO=0;PQA=0;PQR=0;PRO=0;QA=575;QR=6896;RO=182;RPL=0;RPP=35.5824;RPPR=398.218;RPR=15;RUN=1;SAF=0;SAP=35.5824;SAR=15;SRF=0;SRP=398.218;SRR=182;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:23,2:23:888:2:78:0,-0.122277,-72.8356 0/1:35:29,6:29:1097:6:229:-10.4396,0,-88.4946 0/1:22:18,4:18:694:4:152:-7.42686,0,-56.1708 0/0:37:37,0:37:1383:0:0:0,-11.1381,-124.744 0/0:21:21,0:21:768:0:0:0,-6.32163,-69.4326 0/0:57:54,3:54:2066:3:116:0,-6.341,-175.355 dDocent_Contig_4258 15 . A G 1849.11 . AB=0.136961;ABP=1223.35;AC=5;AF=0.416667;AN=12;AO=161;CIGAR=1X;DP=1435;DPB=1435;DPRA=0;EPP=352.617;EPPR=2769.47;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.913043;PAIREDR=0.986656;PAO=0;PQA=0;PQR=0;PRO=0;QA=6318;QR=50876;RO=1274;RPL=0;RPP=352.617;RPPR=2769.47;RPR=161;RUN=1;SAF=161;SAP=352.617;SAR=0;SRF=1274;SRP=2769.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:159:135,24:135:5425:24:948:-37.7567,0,-440.215 0/1:245:215,30:215:8621:30:1184:-33.0879,0,-701.616 0/1:148:114,34:114:4584:34:1341:-76.3978,0,-367.914 0/1:176:150,26:150:5971:26:995:-36.8546,0,-484.178 0/1:338:306,32:306:12179:32:1239:-10.0356,0,-993.507 0/0:369:354,15:354:14096:15:611:0,-55.7526,-1212.27 dDocent_Contig_4259 25 . A G 105.2 . AB=0.112903;ABP=164.4;AC=2;AF=0.166667;AN=12;AO=27;CIGAR=1X;DP=462;DPB=462;DPRA=0;EPP=53.2759;EPPR=665.94;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=59.0968;NS=6;NUMALT=1;ODDS=0;PAIRED=0.777778;PAIREDR=0.753456;PAO=0;PQA=0;PQR=0;PRO=0;QA=1066;QR=17082;RO=434;RPL=0;RPP=61.6401;RPPR=860.572;RPR=27;RUN=1;SAF=26;SAP=53.2759;SAR=1;SRF=399;SRP=665.94;SRR=35;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:84:74,10:74:2881:10:402:-11.2518,0,-230.164 0/0:126:121,5:121:4761:5:188:0,-20.6519,-407.176 0/0:82:80,2:80:3143:2:74:0,-17.6587,-270.178 0/0:70:67,2:67:2645:2:82:0,-13.3943,-226.718 0/0:60:56,4:56:2214:4:163:0,-3.00337,-184.377 0/1:40:36,4:36:1438:4:157:-2.46598,0,-117.631 dDocent_Contig_4260 98 . N T 91.4209 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=93;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:24:-2.39989,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:69:-6.43895,-0.90309,0 dDocent_Contig_4261 108 . T G 253.23 . AB=0.10365;ABP=937.691;AC=1;AF=0.0833333;AN=12;AO=227;CIGAR=1X;DP=4221;DPB=4221;DPRA=1.09877;EPP=495.935;EPPR=8673.7;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.999249;PAO=0;PQA=0;PQR=0;PRO=0;QA=8471;QR=151318;RO=3993;RPL=0;RPP=495.935;RPPR=8673.7;RPR=227;RUN=1;SAF=0;SAP=495.935;SAR=227;SRF=0;SRP=8673.7;SRR=3993;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:685:614,71:614:23286:71:2584:-26.5449,0,-1888.24 0/0:662:624,38:624:23720:38:1452:0,-68.3261,-2002.49 0/0:550:509,41:509:19345:41:1553:0,-25.5313,-1599.98 0/0:650:650,0:650:24440:0:0:0,-195.669,-2198.25 0/0:946:899,46:899:34139:46:1723:0,-129.226,-2915.15 0/0:728:697,31:697:26388:31:1159:0,-114.551,-2268.81 dDocent_Contig_4262 16 . T G 18450 . AB=0.034181;ABP=6895.46;AC=0;AF=0;AN=12;AO=125;CIGAR=7I2M1X3M1X;DP=3657;DPB=3803.57;DPRA=0;EPP=274.444;EPPR=5019.73;GTI=0;LEN=1;MEANALT=9.83333;MQM=9.28;MQMR=59.4403;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0.356901;PAO=0.5;PQA=18.5;PQR=0;PRO=0;QA=4393;QR=90584;RO=2362;RPL=0;RPP=274.444;RPPR=5132.03;RPR=125;RUN=1;SAF=125;SAP=274.444;SAR=0;SRF=2349;SRP=5019.73;SRR=13;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:544:358,25,31,96:358:13694:25,31,96:884,1210,3710:-196.617,-293.166,-1406,-204.948,-1314.1,-1316.01,0,-1109.19,-1021,-1091.53 0|0:778:529,31,51,129:529:20259:31,51,129:1087,2011,5019:-239.114,-386.425,-2030.41,-233.269,-1874.66,-1871.27,0,-1641.43,-1488.31,-1614.55 0|0:472:345,7,21,75:345:13215:7,21,75:250,803,2988:-137.896,-238.39,-1313,-175.875,-1249.24,-1246.29,0,-1073.4,-1010.89,-1054.19 0|0:689:399,36,38,191:399:15324:36,38,191:1254,1480,7340:-477.337,-579.58,-1814.47,-475.836,-1703.7,-1710.15,0,-1227.94,-1124.21,-1188.32 0|0:608:395,8,18,173:395:15167:8,18,173:281,709,6686:-430.138,-544.185,-1780.5,-490.992,-1724.85,-1724.3,0,-1233.92,-1180.73,-1186.71 0|0:566:336,18,18,151:336:12925:18,18,151:637,723,5806:-375.123,-459.473,-1509.81,-416.687,-1455.65,-1467.04,0,-1039.01,-996.233,-1010.36 dDocent_Contig_4263 98 . N T 285.503 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=292;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:36:-3.59827,-0.30103,0 1/1:1:0,1:0:0:1:10:-0.999996,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:72:-6.83672,-0.60206,0 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 1/1:4:0,4:0:0:4:142:-13.1293,-1.20412,0 dDocent_Contig_4264 110 . G T 281.913 . AB=0.183673;ABP=88.1852;AC=2;AF=0.166667;AN=12;AO=28;CIGAR=1X;DP=300;DPB=300;DPRA=0;EPP=63.8115;EPPR=591.479;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.464286;PAIREDR=0.472325;PAO=0;PQA=0;PQR=0;PRO=0;QA=1047;QR=10467;RO=271;RPL=28;RPP=63.8115;RPPR=591.479;RPR=0;RUN=1;SAF=0;SAP=63.8115;SAR=28;SRF=0;SRP=591.479;SRR=271;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:42,1:42:1626:1:36:0,-9.66092,-143.043 0/0:63:61,2:61:2347:2:78:0,-11.5614,-204.018 0/1:43:34,9:34:1313:9:332:-17.2857,0,-105.502 0/0:57:53,4:53:2056:4:154:0,-2.92525,-171.024 0/0:38:35,3:35:1352:3:110:0,-1.17872,-111.702 0/1:55:46,9:46:1773:9:337:-14.1273,0,-143.261 dDocent_Contig_4265 7 . C T 3635.82 . AB=0.0620438;ABP=459.495;AC=0;AF=0;AN=12;AO=18;CIGAR=1X1M3I3M1X;DP=716;DPB=808.5;DPRA=0;EPP=42.0968;EPPR=1149.55;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=711;QR=20438;RO=528;RPL=0;RPP=42.0968;RPPR=1149.55;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=528;SRP=1149.55;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:128:92,0,35:92:3542:0,35:0,1341:-82.3399,-110.035,-400.852,0,-290.801,-280.265 0|0:200:128,0,71:128:4957:0,71:0,2759:-188.151,-226.683,-633.892,0,-407.188,-385.815 0|0:102:69,13,20:69:2680:13,20:516,776:-42.9762,-21.2645,-237.566,0,-177.727,-214.187 0|0:114:103,1,9:103:3976:1,9:40,358:0,-27.7109,-353.923,-1.53461,-324.746,-325.331 0|0:77:60,3,14:60:2346:3,14:116,553:-27.4498,-35.985,-227.964,0,-183.361,-188.675 0|0:95:76,1,17:76:2937:1,17:39,666:-31.8876,-51.5601,-292.476,0,-238.012,-236.1 dDocent_Contig_4266 39 . T C 11033 . AB=0.228147;ABP=1471.73;AC=6;AF=0.5;AN=12;AO=522;CIGAR=1X;DP=2288;DPB=2288;DPRA=0;EPP=1136.52;EPPR=3692.34;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=0.00957854;PAIREDR=0.682166;PAO=0;PQA=0;PQR=0;PRO=0;QA=19828;QR=60184;RO=1699;RPL=0;RPP=1136.52;RPPR=3692.34;RPR=522;RUN=1;SAF=522;SAP=1136.52;SAR=0;SRF=1699;SRP=3692.34;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:334:229,92:229:7979:92:3506:-218.647,0,-621.044 0/1:434:293,128:293:10465:128:4880:-312.118,0,-814.542 0/1:301:217,70:217:7754:70:2660:-152.814,0,-611.018 0/1:337:238,89:238:8308:89:3370:-204.66,0,-648.874 0/1:491:401,77:401:14299:77:2912:-117.977,0,-1142.24 0/1:391:321,66:321:11379:66:2500:-108.302,0,-906.947 dDocent_Contig_4267 25 . G A 153.716 . AB=0.0979228;ABP=476.23;AC=1;AF=0.0833333;AN=12;AO=63;CIGAR=1X;DP=1915;DPB=1915;DPRA=0.616631;EPP=139.813;EPPR=4024.58;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99892;PAO=0;PQA=0;PQR=0;PRO=0;QA=2509;QR=73227;RO=1852;RPL=0;RPP=139.813;RPPR=4024.58;RPR=63;RUN=1;SAF=63;SAP=139.813;SAR=0;SRF=1852;SRP=4024.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:229:222,7:222:8669:7:281:0,-43.2735,-754.096 0/0:328:325,3:325:12874:3:123:0,-87.273,-1146.3 0/1:337:304,33:304:12031:33:1312:-16.8944,0,-980.534 0/0:350:332,18:332:13140:18:718:0,-40.4156,-1116.75 0/0:469:469,0:469:18540:0:0:0,-141.183,-1667.14 0/0:202:200,2:200:7973:2:75:0,-53.6893,-710.045 dDocent_Contig_4268 11 . T C 115139 . AB=0.866423;ABP=4796.18;AC=6;AF=0.5;AN=12;AO=3561;CIGAR=1X;DP=4110;DPB=4110;DPRA=0;EPP=7735.62;EPPR=1195.15;GTI=0;LEN=1;MEANALT=1;MQM=59.9992;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998877;PAIREDR=0.992714;PAO=0;PQA=0;PQR=0;PRO=0;QA=141942;QR=21978;RO=549;RPL=0;RPP=7735.62;RPPR=1195.15;RPR=3561;RUN=1;SAF=3561;SAP=7735.62;SAR=0;SRF=549;SRP=1195.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:657:65,592:65:2589:592:23480:-1913.41,0,-35.3625 0/1:721:63,658:63:2530:658:26126:-2132.01,0,-10.788 0/1:430:48,382:48:1917:382:15337:-1249.64,0,-43.2765 0/1:755:67,688:67:2682:688:27525:-2247.47,0,-14.2196 0/1:812:196,616:196:7852:616:24528:-1960.91,0,-461.809 0/1:735:110,625:110:4408:625:24946:-2021.66,0,-175.395 dDocent_Contig_4269 13 . T A 2430.03 . AB=0.239819;ABP=262.899;AC=2;AF=0.166667;AN=12;AO=119;CIGAR=1X2M;DP=971;DPB=971;DPRA=1.09467;EPP=261.416;EPPR=1803.16;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4723;QR=33066;RO=829;RPL=0;RPP=261.416;RPPR=1803.16;RPR=119;RUN=1;SAF=119;SAP=261.416;SAR=0;SRF=829;SRP=1803.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:109:94,8,6:94:3739:8,6:319,246:0,-2.02582,-307.468,-7.98484,-289.571,-314.035 0|0:150:145,5,0:145:5785:5,0:197,0:0,-27.0485,-502.364,-43.6493,-503.87,-520.077 0|0:149:143,3,3:143:5721:3,3:120,123:0,-33.1672,-503.516,-32.8901,-494.266,-503.248 0|0:121:113,4,4:113:4484:4,4:155,146:0,-21.2717,-389.205,-22.1024,-378.485,-390.014 0|1:227:174,0,53:174:6943:0,53:0,2121:-122.735,-175.114,-746.901,0,-572.186,-556.231 0|1:215:160,2,53:160:6394:2,53:81,2087:-123.49,-164.975,-691.031,0,-519.969,-510.694 dDocent_Contig_4270 107 . N C 5623.87 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=185;CIGAR=1X;DP=185;DPB=185;DPRA=0;EPP=404.733;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6225;QR=0;RO=0;RPL=0;RPP=404.733;RPPR=0;RPR=185;RUN=1;SAF=0;SAP=404.733;SAR=185;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:30:-2.99957,-0.30103,0 1/1:1:0,1:0:0:1:27:-2.69978,-0.30103,0 1/1:1:0,1:0:0:1:30:-2.99957,-0.30103,0 1/1:91:0,91:0:0:91:3075:-276.995,-27.3937,0 1/1:91:0,91:0:0:91:3063:-275.914,-27.3937,0 dDocent_Contig_4271 7 . C T 237.768 . AB=0.154545;ABP=117.032;AC=1;AF=0.0833333;AN=12;AO=49;CIGAR=1X;DP=807;DPB=807;DPRA=2.15234;EPP=109.412;EPPR=1642.47;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1857;QR=29082;RO=755;RPL=0;RPP=109.412;RPPR=1642.47;RPR=49;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=755;SRP=1642.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:110:93,17:93:3580:17:642:-24.9987,0,-289.206 0/0:276:251,22:251:9672:22:845:0,-6.1972,-793.764 0/0:181:181,0:181:6986:0:0:0,-54.4864,-628.6 0/0:165:155,10:155:5987:10:370:0,-16.0259,-505.122 0/0:37:37,0:37:1415:0:0:0,-11.1381,-127.63 0/0:38:38,0:38:1442:0:0:0,-11.4391,-130.055 dDocent_Contig_4272 9 . A T 11149.7 . AB=0.705298;ABP=113.568;AC=6;AF=0.5;AN=12;AO=362;CIGAR=1X;DP=471;DPB=471;DPRA=7.04615;EPP=789.083;EPPR=239.701;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13742;QR=4105;RO=109;RPL=0;RPP=789.083;RPPR=239.701;RPR=362;RUN=1;SAF=362;SAP=789.083;SAR=0;SRF=109;SRP=239.701;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:13:13,0:13:477:0:0:0,-3.91339,-43.2668 0/1:72:13,59:13:490:59:2270:-182.843,0,-22.7659 0/1:55:13,42:13:495:42:1594:-127.169,0,-28.34 0/1:71:40,31:40:1501:31:1159:-83.231,0,-113.994 1/1:156:7,149:7:269:149:5678:-486.413,-22.3859,0 0/1:104:23,81:23:873:81:3041:-242.541,0,-47.5809 dDocent_Contig_4273 33 . T C 32.8302 . AB=0.108696;ABP=64.1892;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=276;DPB=276;DPRA=1;EPP=13.8677;EPPR=591.479;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.354244;PAO=0;PQA=0;PQR=0;PRO=0;QA=203;QR=10750;RO=271;RPL=0;RPP=13.8677;RPPR=591.479;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=271;SRP=591.479;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1414:0:0:0,-10.536,-127.508 0/0:67:67,0:67:2648:0:0:0,-20.169,-238.436 0/0:23:23,0:23:917:0:0:0,-6.92369,-82.8353 0/1:46:41,5:41:1638:5:203:-4.80568,0,-133.801 0/0:48:48,0:48:1892:0:0:0,-14.4494,-170.48 0/0:57:57,0:57:2241:0:0:0,-17.1587,-201.866 dDocent_Contig_4274 11 . T G 142.792 . AB=0.149254;ABP=74.6041;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=137;DPB=137;DPRA=1.91429;EPP=24.725;EPPR=278.787;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=410;QR=5064;RO=127;RPL=0;RPP=24.725;RPPR=278.787;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=127;SRP=278.787;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:813:0:0:0,-6.0206,-73.4846 0/0:23:23,0:23:904:0:0:0,-6.92369,-81.6574 0/0:12:12,0:12:487:0:0:0,-3.61236,-44.1806 0/1:43:37,6:37:1495:6:246:-9.57583,0,-121.845 0/0:15:15,0:15:570:0:0:0,-4.51545,-51.626 0/1:24:20,4:20:795:4:164:-7.92518,0,-64.6395 dDocent_Contig_4275 54 . C A 56807.8 . AB=0.385784;ABP=674.143;AC=6;AF=0.5;AN=12;AO=2285;CIGAR=1X;DP=5923;DPB=5923;DPRA=0;EPP=4964.82;EPPR=7881.11;GTI=0;LEN=1;MEANALT=1.5;MQM=59.9978;MQMR=60;NS=6;NUMALT=1;ODDS=4.44089e-16;PAIRED=1;PAIREDR=0.999724;PAO=0;PQA=0;PQR=0;PRO=0;QA=83068;QR=134304;RO=3628;RPL=2285;RPP=4964.82;RPPR=7881.11;RPR=0;RUN=1;SAF=2285;SAP=4964.82;SAR=0;SRF=3628;SRP=7881.11;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:781:404,370:404:14983:370:13273:-960.741,0,-1114.46 0/1:1013:433,580:433:15940:580:21178:-1600.11,0,-1128.96 0/1:645:246,399:246:9105:399:14635:-1122.4,0,-625.036 0/1:911:448,462:448:16690:462:16649:-1223.5,0,-1227.07 0/1:1312:1017,295:1017:37824:295:10804:-577.084,0,-3007.04 0/1:1261:1080,179:1080:39762:179:6529:-208.157,0,-3196.93 dDocent_Contig_4277 164 . A G 137.989 . AB=0.103448;ABP=42.621;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=4M1X;DP=127;DPB=119.2;DPRA=1.61111;EPP=9.52472;EPPR=224.816;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.881818;PAO=0;PQA=0;PQR=0;PRO=0;QA=101;QR=4206;RO=110;RPL=3;RPP=9.52472;RPPR=224.816;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=241.872;SRR=110;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:16:14,1,0:14:534:1,0:34,0:0,-1.48131,-44.9783,-4.21442,-45.2793,-48.0347 0|1:29:24,2,3:24:923:2,3:68,101:-0.953855,-2.66121,-77.8763,0,-70.303,-74.9125 0|0:24:16,8,0:16:618:8,0:247,0:-15.3081,0,-48.7339,-20.1246,-51.1422,-70.9324 0|0:20:18,2,0:18:674:2,0:74,0:-1.00528,0,-54.9674,-6.42382,-55.5695,-61.6231 0|0:16:16,0,0:16:615:0,0:0,0:0,-4.81648,-55.6834,-4.81648,-55.6834,-55.6834 0|0:22:22,0,0:22:842:0,0:0,0:0,-6.62266,-76.0989,-6.62266,-76.0989,-76.0989 dDocent_Contig_4278 7 . C A 423.267 . AB=0.235294;ABP=65.0889;AC=4;AF=0.333333;AN=12;AO=25;CIGAR=1X;DP=139;DPB=139;DPRA=1.12381;EPP=57.2971;EPPR=250.558;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.6;PAIREDR=0.815789;PAO=0;PQA=0;PQR=0;PRO=0;QA=915;QR=4377;RO=114;RPL=0;RPP=57.2971;RPPR=250.558;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=114;SRP=250.558;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:27:21,6:21:803:6:232:-13.1211,0,-64.4667 0/1:28:18,10:18:690:10:356:-23.9422,0,-54.0039 0/0:21:21,0:21:811:0:0:0,-6.32163,-73.3151 0/1:23:18,5:18:697:5:171:-8.79796,0,-56.1406 0/1:24:21,3:21:791:3:117:-3.68566,0,-64.2859 0/0:16:15,1:15:585:1:39:0,-0.919915,-49.0967 dDocent_Contig_4279 16 . T C 27043.2 . AB=0.370455;ABP=383.894;AC=2;AF=0.166667;AN=12;AO=972;CIGAR=1X;DP=5412;DPB=5412;DPRA=1.68402;EPP=2113.68;EPPR=9633.49;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=39019;QR=176962;RO=4435;RPL=0;RPP=2113.68;RPPR=9633.49;RPR=972;RUN=1;SAF=972;SAP=2113.68;SAR=0;SRF=4435;SRP=9633.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:724:722,1:722:28834:1:40:0,-214.054,-2588.43 0/0:836:832,3:832:33163:3:121:0,-240.488,-2970.32 0/0:534:533,0:533:21273:0:0:0,-160.449,-1912.33 0/0:705:705,0:705:28066:0:0:0,-212.226,-2523.43 0/1:1358:897,459:897:35793:459:18419:-1247.6,0,-2809.49 0/1:1255:746,509:746:29833:509:20439:-1459.94,0,-2304.46 dDocent_Contig_4280 13 . T A 3909.69 . AB=0.199797;ABP=774.839;AC=4;AF=0.333333;AN=12;AO=202;CIGAR=1X;DP=1519;DPB=1519;DPRA=0.933582;EPP=441.648;EPPR=2862.84;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996203;PAO=0;PQA=0;PQR=0;PRO=0;QA=7914;QR=45703;RO=1317;RPL=0;RPP=441.648;RPPR=2862.84;RPR=202;RUN=1;SAF=202;SAP=441.648;SAR=0;SRF=1317;SRP=2862.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:238:189,49:189:6463:49:1872:-97.0496,0,-510.107 0/1:320:263,57:263:9239:57:2232:-104.733,0,-735.098 0/1:148:115,33:115:3970:33:1306:-73.2544,0,-312.903 0/1:280:222,58:222:7720:58:2303:-123.154,0,-610.508 0/0:268:268,0:268:9199:0:0:0,-80.676,-827.863 0/0:265:260,5:260:9112:5:201:0,-61.3024,-801.561 dDocent_Contig_4281 32 . C T 60.862 . AB=0.113636;ABP=117.111;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=529;DPB=529;DPRA=1.08383;EPP=42.0968;EPPR=1110.46;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996078;PAO=0;PQA=0;PQR=0;PRO=0;QA=677;QR=19977;RO=510;RPL=0;RPP=42.0968;RPPR=1110.46;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=510;SRP=1110.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:97:93,4:93:3597:4:154:0,-14.9666,-309.538 0/0:114:112,2:112:4382:2:76:0,-27.1027,-387.129 0/1:88:78,10:78:3092:10:375:-7.60908,0,-251.873 0/0:63:60,2:60:2369:2:72:0,-12.0012,-206.617 0/0:90:90,0:90:3512:0:0:0,-27.0927,-316.135 0/0:77:77,0:77:3025:0:0:0,-23.1793,-272.334 dDocent_Contig_4282 98 . N C 714.375 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=24;CIGAR=3X;DP=24;DPB=34.6667;DPRA=0;EPP=55.1256;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=21.2407;PAIRED=1;PAIREDR=0;PAO=4;PQA=133;PQR=0;PRO=0;QA=794;QR=0;RO=0;RPL=24;RPP=55.1256;RPPR=0;RPR=0;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:24:0,24:0:0:24:794:-71.4375,-7.22472,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_4283 107 . N A 1031.86 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=34;CIGAR=1X;DP=34;DPB=34;DPRA=0;EPP=76.8404;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1120;QR=0;RO=0;RPL=0;RPP=76.8404;RPPR=0;RPR=34;RUN=1;SAF=0;SAP=76.8404;SAR=34;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:126:-11.6522,-1.20412,0 1/1:6:0,6:0:0:6:178:-16.312,-1.80618,0 1/1:15:0,15:0:0:15:502:-45.4951,-4.51545,0 1/1:6:0,6:0:0:6:208:-19.0595,-1.80618,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:106:-9.88889,-0.90309,0 dDocent_Contig_4284 42 . G C 145337 . AB=0.879036;ABP=2901.85;AC=9;AF=0.75;AN=12;AO=4357;CIGAR=1X;DP=4766;DPB=4766;DPRA=0;EPP=9464.12;EPPR=882.457;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999311;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=174480;QR=16093;RO=405;RPL=0;RPP=9464.12;RPPR=882.457;RPR=4357;RUN=1;SAF=4357;SAP=9464.12;SAR=0;SRF=405;SRP=882.457;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:846:24,822:24:949:822:32865:-2869.05,-168.96,0 0/1:1015:123,891:123:4885:891:35672:-2901.53,0,-134.003 0/1:573:60,513:60:2394:513:20587:-1678.53,0,-43.1203 1/1:797:41,755:41:1637:755:30201:-2567.7,-92.4583,0 0/1:735:97,638:97:3835:638:25580:-2078.63,0,-123.907 1/1:800:60,738:60:2393:738:29575:-2443.47,-25.1051,0 dDocent_Contig_4285 7 . C T 95.2419 . AB=0.0928196;ABP=825.299;AC=1;AF=0.0833333;AN=12;AO=85;CIGAR=1X;DP=3522;DPB=3522;DPRA=0.930658;EPP=187.585;EPPR=7464.19;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998545;PAO=0;PQA=0;PQR=0;PRO=0;QA=3261;QR=131790;RO=3436;RPL=0;RPP=187.585;RPPR=7464.19;RPR=85;RUN=1;SAF=85;SAP=187.585;SAR=0;SRF=3436;SRP=7464.19;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:562:555,7:555:21240:7:266:0,-144.877,-1886.13 0/0:623:622,0:622:23846:0:0:0,-187.241,-2144.38 0/0:616:593,23:593:22849:23:888:0,-105.194,-1974.84 0/1:571:518,53:518:19915:53:2030:-11.0471,0,-1619.37 0/0:516:515,1:515:19686:1:38:0,-151.534,-1766.88 0/0:634:633,1:633:24254:1:39:0,-186.956,-2177.57 dDocent_Contig_4286 1 . N G 743.392 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=20;CIGAR=1X;DP=20;DPB=20;DPRA=0;EPP=46.4397;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.35;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=791;QR=0;RO=0;RPL=0;RPP=46.4397;RPPR=0;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:162:-14.9667,-1.20412,0 1/1:2:0,2:0:0:2:78:-7.4033,-0.60206,0 1/1:5:0,5:0:0:5:193:-17.7406,-1.50515,0 1/1:3:0,3:0:0:3:119:-11.095,-0.90309,0 1/1:4:0,4:0:0:4:157:-14.5083,-1.20412,0 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 dDocent_Contig_4287 50 . C T 69.0706 . AB=0.115942;ABP=91.4113;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=284;DPB=284;DPRA=0.64186;EPP=20.3821;EPPR=602.337;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.952899;PAO=0;PQA=0;PQR=0;PRO=0;QA=317;QR=10958;RO=276;RPL=8;RPP=20.3821;RPPR=602.337;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=276;SRP=602.337;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:46:40,6:40:1587:6:240:-8.12716,0,-129.22 0/0:54:54,0:54:2103:0:0:0,-16.2556,-189.457 0/0:33:33,0:33:1324:0:0:0,-9.93399,-119.421 0/1:23:21,2:21:811:2:77:-0.38451,0,-66.3712 0/0:65:65,0:65:2631:0:0:0,-19.5669,-236.906 0/0:63:63,0:63:2502:0:0:0,-18.9649,-225.322 dDocent_Contig_4288 48 . A T 2860.24 . AB=0.397222;ABP=36.0408;AC=6;AF=0.5;AN=12;AO=143;CIGAR=1X;DP=360;DPB=360;DPRA=0;EPP=288.02;EPPR=474.22;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.965035;PAIREDR=0.995392;PAO=0;PQA=0;PQR=0;PRO=0;QA=4487;QR=8307;RO=217;RPL=0;RPP=313.531;RPPR=474.22;RPR=143;RUN=1;SAF=140;SAP=288.02;SAR=3;SRF=217;SRP=474.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:82:45,37:45:1733:37:1190:-82.6988,0,-131.519 0/1:79:63,16:63:2426:16:530:-24.2245,0,-194.742 0/1:57:39,18:39:1515:18:569:-34.3479,0,-119.444 0/1:89:32,57:32:1198:57:1701:-126.554,0,-81.3007 0/1:21:13,8:13:485:8:274:-18.6706,0,-37.6654 0/1:32:25,7:25:950:7:223:-10.7505,0,-76.165 dDocent_Contig_4289 7 . C G 1276.15 . AB=0.196078;ABP=371.266;AC=2;AF=0.166667;AN=12;AO=169;CIGAR=1X;DP=1583;DPB=1583;DPRA=0;EPP=369.989;EPPR=3053.93;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998577;PAO=0;PQA=0;PQR=0;PRO=0;QA=5400;QR=54006;RO=1405;RPL=0;RPP=369.989;RPPR=3053.93;RPR=169;RUN=1;SAF=169;SAP=369.989;SAR=0;SRF=1405;SRP=3053.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:244:220,23:220:8438:23:760:0,-4.84016,-690.49 0/0:317:282,35:282:10818:35:1041:0,-1.49251,-879.278 0/1:165:131,32:131:5051:32:1058:-46.1888,0,-405.298 0/1:294:231,58:231:8862:58:1906:-84.6484,0,-710.197 0/0:293:286,7:286:11046:7:227:0,-67.4569,-972.95 0/0:270:255,14:255:9791:14:408:0,-44.1065,-843.869 dDocent_Contig_4290 20 . A G 3556.69 . AB=0.141553;ABP=1958.25;AC=3;AF=0.25;AN=12;AO=291;CIGAR=1X;DP=3472;DPB=3472;DPRA=0;EPP=634.909;EPPR=6906.12;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999685;PAO=0;PQA=0;PQR=0;PRO=0;QA=11581;QR=126296;RO=3179;RPL=0;RPP=634.909;RPPR=6906.12;RPR=291;RUN=1;SAF=291;SAP=634.909;SAR=0;SRF=3179;SRP=6906.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:579:550,28:550:21868:28:1112:0,-74.0124,-1865.94 0/1:647:572,75:572:22730:75:2968:-72.4534,0,-1849.01 0/1:507:414,93:414:16487:93:3687:-179.23,0,-1329.93 0/1:598:518,80:518:20563:80:3213:-109.207,0,-1668.98 0/0:663:652,11:652:25960:11:449:0,-158.817,-2293.37 0/0:478:473,4:473:18688:4:152:0,-129.939,-1666.35 dDocent_Contig_4292 22 . T G 332.255 . AB=0.159091;ABP=136.26;AC=2;AF=0.166667;AN=12;AO=26;CIGAR=1X;DP=307;DPB=307;DPRA=0.961905;EPP=59.4686;EPPR=611.023;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1037;QR=11079;RO=280;RPL=0;RPP=59.4686;RPPR=611.023;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=280;SRP=611.023;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:47:36,11:36:1417:11:436:-25.442,0,-113.637 0/0:40:37,3:37:1478:3:117:0,-1.13191,-122.359 0/1:85:74,10:74:2929:10:403:-11.0052,0,-238.095 0/0:30:28,2:28:1113:2:81:0,-1.34517,-92.7688 0/0:64:64,0:64:2528:0:0:0,-19.2659,-227.662 0/0:41:41,0:41:1614:0:0:0,-12.3422,-145.493 dDocent_Contig_4293 61 . T A 57899.4 . AB=0.78322;ABP=1638.92;AC=6;AF=0.5;AN=12;AO=1839;CIGAR=1X;DP=2348;DPB=2348;DPRA=0;EPP=3996.35;EPPR=1106.12;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999456;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=72362;QR=19967;RO=508;RPL=1839;RPP=3996.35;RPPR=1106.12;RPR=0;RUN=1;SAF=1839;SAP=3996.35;SAR=0;SRF=508;SRP=1106.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:362:47,315:47:1842:315:12391:-1005.38,0,-57.0112 0/1:473:85,387:85:3326:387:15127:-1218.15,0,-157.177 0/1:423:104,319:104:4117:319:12677:-1012.7,0,-243.178 0/1:312:66,246:66:2561:246:9711:-779.501,0,-136.712 0/1:407:123,284:123:4879:284:11181:-883.079,0,-316.5 0/1:371:83,288:83:3242:288:11275:-902.349,0,-180.176 dDocent_Contig_4294 9 . A G 242.526 . AB=0.0983982;ABP=1227.39;AC=1;AF=0.0833333;AN=12;AO=176;CIGAR=1X;DP=5348;DPB=5348;DPRA=1.49778;EPP=385.189;EPPR=11227.4;GTI=0;LEN=1;MEANALT=1.6;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999613;PAO=0;PQA=0;PQR=0;PRO=0;QA=6602;QR=196812;RO=5169;RPL=0;RPP=385.189;RPPR=11227.4;RPR=176;RUN=1;SAF=176;SAP=385.189;SAR=0;SRF=5169;SRP=11227.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:814:813,1:813:30887:1:39:0,-241.142,-2774.15 0/0:1091:1063,27:1063:40585:27:1025:0,-235.921,-3557.59 0/0:630:630,0:630:24002:0:0:0,-189.649,-2158.85 0/0:908:905,1:905:34451:1:27:0,-270.295,-3095.85 0/0:1031:970,61:970:36899:61:2303:0,-102.878,-3111.22 0/1:874:788,86:788:29988:86:3208:-25.7754,0,-2434.07 dDocent_Contig_4295 14 . T A 606.87 . AB=0.172727;ABP=207.681;AC=5;AF=0.416667;AN=12;AO=40;CIGAR=1X;DP=344;DPB=344;DPRA=0;EPP=89.8692;EPPR=663.138;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1574;QR=12046;RO=304;RPL=0;RPP=89.8692;RPPR=663.138;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=304;SRP=663.138;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:27,3:27:1087:3:122:-2.34159,0,-89.0857 0/1:45:33,12:33:1322:12:451:-27.3736,0,-105.694 0/1:41:35,6:35:1386:6:236:-9.26768,0,-112.647 0/1:43:36,7:36:1436:7:284:-12.9891,0,-116.548 0/0:124:122,2:122:4812:2:82:0,-29.548,-425.217 0/1:61:51,10:51:2003:10:399:-17.9051,0,-162.102 dDocent_Contig_4296 15 . A T 827.335 . AB=0.196078;ABP=166.68;AC=1;AF=0.0833333;AN=12;AO=67;CIGAR=1X;DP=1123;DPB=1123;DPRA=1.85924;EPP=148.499;EPPR=2287.4;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2716;QR=42138;RO=1052;RPL=0;RPP=148.499;RPPR=2287.4;RPR=67;RUN=1;SAF=67;SAP=148.499;SAR=0;SRF=1052;SRP=2287.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:140:139,0:139:5564:0:0:0,-41.8432,-500.161 0/0:229:226,3:226:9090:3:122:0,-57.5634,-806.156 0/0:98:98,0:98:3910:0:0:0,-29.5009,-351.887 0/0:158:157,1:157:6325:1:41:0,-43.4682,-564.873 0/0:294:268,23:268:10676:23:937:0,-3.37575,-875.485 0/1:204:164,40:164:6573:40:1616:-84.2564,0,-529.86 dDocent_Contig_4297 98 . N A 220.815 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=7;CIGAR=3X;DP=7;DPB=63.6667;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0.571429;PAIREDR=0;PAO=45;PQA=1502;PQR=0;PRO=0;QA=242;QR=0;RO=0;RPL=7;RPP=18.2106;RPPR=0;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:1:0,1:0:0:1:35:-3.14914,-0.30103,0 1|1:6:0,6:0:0:6:207:-18.63,-1.80618,0 dDocent_Contig_4298 98 . N A 148.82 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=150;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:72:-6.71957,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:48:-4.55979,-0.60206,0 1/1:1:0,1:0:0:1:30:-2.99957,-0.30103,0 dDocent_Contig_4299 1 . N G 148.755 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=7.37776;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=161;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:161:-14.8753,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_4300 53 . T G 5355.24 . AB=0.467822;ABP=6.64375;AC=6;AF=0.5;AN=12;AO=189;CIGAR=1X;DP=404;DPB=404;DPRA=0;EPP=413.419;EPPR=467.705;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.820106;PAIREDR=0.836449;PAO=0;PQA=0;PQR=0;PRO=0;QA=7406;QR=7058;RO=214;RPL=189;RPP=413.419;RPPR=467.705;RPR=0;RUN=1;SAF=189;SAP=413.419;SAR=0;SRF=214;SRP=467.705;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:59:29,30:29:933:30:1146:-85.6487,0,-66.4942 0/1:70:51,18:51:1628:18:726:-44.8077,0,-125.936 0/1:86:36,50:36:1211:50:1992:-153.577,0,-83.3874 0/1:48:27,21:27:924:21:810:-58.7628,0,-69.0155 0/1:95:46,49:46:1552:49:1911:-143.595,0,-111.359 0/1:46:25,21:25:810:21:821:-60.3554,0,-59.3481 dDocent_Contig_4301 62 . T C 2557.26 . AB=0.15347;ABP=1070.03;AC=1;AF=0.0833333;AN=12;AO=234;CIGAR=1X;DP=5746;DPB=5746;DPRA=0.898662;EPP=511.135;EPPR=11970;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9339;QR=220677;RO=5511;RPL=234;RPP=511.135;RPPR=11970;RPR=0;RUN=1;SAF=234;SAP=511.135;SAR=0;SRF=5511;SRP=11970;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:827:825,2:825:32979:2:81:0,-241.266,-2957.32 0/0:1046:1046,0:1046:41950:0:0:0,-314.877,-3771.4 0/0:716:697,18:697:27936:18:722:0,-150.344,-2446.34 0/0:976:963,13:963:38427:13:521:0,-246.569,-3407.53 0/0:1158:1114,44:1114:44541:44:1732:0,-192.489,-3848.27 0/1:1023:866,157:866:34844:157:6283:-257.249,0,-2824.64 dDocent_Contig_4302 13 . C T 535.269 . AB=0.135889;ABP=333.505;AC=1;AF=0.0833333;AN=12;AO=49;CIGAR=1X;DP=1874;DPB=1874;DPRA=1.13903;EPP=109.412;EPPR=3965.95;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1909;QR=73384;RO=1825;RPL=0;RPP=109.412;RPPR=3965.95;RPR=49;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=1825;SRP=3965.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:249:249,0:249:9975:0:0:0,-74.9565,-897.074 0/0:351:351,0:351:14163:0:0:0,-105.662,-1273.53 0/0:335:335,0:335:13477:0:0:0,-100.845,-1211.85 0/0:259:259,0:259:10461:0:0:0,-77.9668,-940.745 0/0:393:383,10:383:15353:10:340:0,-87.397,-1349.62 0/1:287:248,39:248:9955:39:1569:-55.0498,0,-808.885 dDocent_Contig_4303 25 . C T 606.861 . AB=0.168317;ABP=196.035;AC=1;AF=0.0833333;AN=12;AO=53;CIGAR=1X;DP=2951;DPB=2951;DPRA=0.464379;EPP=118.098;EPPR=6293.77;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996203;PAO=0;PQA=0;PQR=0;PRO=0;QA=2076;QR=115064;RO=2897;RPL=0;RPP=118.098;RPPR=6293.77;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=2897;SRP=6293.77;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:570:569,1:569:22616:1:40:0,-167.591,-2029.52 0/0:910:910,0:910:36131:0:0:0,-273.937,-3248.47 0/0:380:378,2:378:14952:2:51:0,-109.552,-1339.75 0/0:620:619,0:619:24576:0:0:0,-186.338,-2209.5 0/1:202:168,34:168:6698:34:1364:-62.209,0,-541.723 0/0:269:253,16:253:10091:16:621:0,-24.7578,-851.322 dDocent_Contig_4304 12 . A T 141.418 . AB=0.155172;ABP=62.913;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=338;DPB=338;DPRA=1.03571;EPP=22.5536;EPPR=717.425;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=364;QR=13180;RO=329;RPL=0;RPP=22.5536;RPPR=717.425;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=329;SRP=717.425;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:50,0:50:1987:0:0:0,-15.0515,-179.021 0/0:77:77,0:77:3063:0:0:0,-23.1793,-275.742 0/0:36:36,0:36:1444:0:0:0,-10.8371,-130.207 0/0:67:67,0:67:2715:0:0:0,-20.169,-244.454 0/1:58:49,9:49:1964:9:364:-15.6646,0,-159.499 0/0:50:50,0:50:2007:0:0:0,-15.0515,-180.814 dDocent_Contig_4305 106 . N C 698.958 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=38;CIGAR=2X1M1X;DP=38;DPB=39.5;DPRA=0;EPP=85.5263;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=20.5263;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=2;PQA=69;PQR=35;PRO=3;QA=1274;QR=0;RO=0;RPL=0;RPP=85.5263;RPPR=0;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:8:0,8:0:0:8:268:-14.3487,-2.40824,0 1|1:10:0,10:0:0:10:338:-21.7592,-3.0103,0 1|1:5:0,5:0:0:5:167:-8.00197,-1.50515,0 1|1:5:0,5:0:0:5:170:-7.90568,-1.50515,0 1|1:6:0,6:0:0:6:195:-13.0414,-1.80618,0 1|1:4:0,4:0:0:4:136:-4.0606,-1.20412,0 dDocent_Contig_4306 98 . N T 409.402 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=13;CIGAR=1X;DP=13;DPB=13;DPRA=0;EPP=31.2394;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=429;QR=0;RO=0;RPL=13;RPP=31.2394;RPPR=0;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:19:-1.89997,-0.30103,0 1/1:4:0,4:0:0:4:133:-12.2986,-1.20412,0 1/1:5:0,5:0:0:5:173:-15.9102,-1.50515,0 dDocent_Contig_4307 1 . N G 151.736 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=157;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:122:-11.3725,-0.90309,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_4308 21 . G A 2092.78 . AB=0.134263;ABP=1586.62;AC=2;AF=0.166667;AN=12;AO=235;CIGAR=1M4I1X;DP=4193;DPB=4663;DPRA=0.720314;EPP=513.306;EPPR=8584.67;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999747;PAO=0;PQA=0;PQR=0;PRO=0;QA=8865;QR=155734;RO=3952;RPL=0;RPP=513.306;RPPR=8584.67;RPR=235;RUN=1;SAF=235;SAP=513.306;SAR=0;SRF=3952;SRP=8584.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:589:500,86:500:19711:86:3246:-115.507,0,-1595.7 0|1:774:676,97:676:26669:97:3666:-96.9928,0,-2164.95 0|0:532:507,25:507:19999:25:940:0,-75.2295,-1713.46 0|0:580:553,27:553:21835:27:1013:0,-83.1133,-1871.96 0|0:895:893,0:893:35128:0:0:0,-268.82,-3158.4 0|0:823:823,0:823:32392:0:0:0,-247.748,-2912.58 dDocent_Contig_4309 98 . N C 136.791 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=2X;DP=4;DPB=4.5;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=1;PQA=35;PQR=0;PRO=0;QA=139;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:1:0,1:0:0:1:35:-3.14877,-0.30103,0 .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 .:.:.:.:.:.:.:. 1|1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 .:.:.:.:.:.:.:. dDocent_Contig_4310 158 . N G 118.85 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=120;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:39:-3.89656,-0.30103,0 dDocent_Contig_4311 1 . N G 70.251 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=74;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:74:-7.02402,-0.60206,0 dDocent_Contig_4312 22 . T C 3019.61 . AB=0.147566;ABP=1443.31;AC=5;AF=0.416667;AN=12;AO=228;CIGAR=1X;DP=1751;DPB=1751;DPRA=0;EPP=498.106;EPPR=3310.16;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9161;QR=60786;RO=1523;RPL=0;RPP=498.106;RPPR=3310.16;RPR=228;RUN=1;SAF=228;SAP=498.106;SAR=0;SRF=1523;SRP=3310.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:443:397,46:397:15790:46:1845:-32.9021,0,-1286.5 0/0:416:385,31:385:15398:31:1251:0,-12.3744,-1271.72 0/1:223:201,22:201:8013:22:872:-11.657,0,-653.582 0/1:425:385,40:385:15418:40:1623:-18.3546,0,-1258.45 0/1:164:97,67:97:3891:67:2702:-193.921,0,-300.805 0/1:80:58,22:58:2276:22:868:-54.348,0,-180.922 dDocent_Contig_4313 13 . T G 475.898 . AB=0.15736;ABP=203.899;AC=2;AF=0.166667;AN=12;AO=37;CIGAR=2X;DP=678;DPB=678;DPRA=1.07925;EPP=83.3548;EPPR=1392.75;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.810811;PAIREDR=0.8375;PAO=0;PQA=0;PQR=0;PRO=0;QA=1443;QR=24043;RO=640;RPL=0;RPP=83.3548;RPPR=1392.75;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=640;SRP=1392.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:99:95,3:95:3531:3:119:0,-18.58,-306.911 0|0:157:155,2:155:5804:2:80:0,-39.6699,-514.77 0|0:106:106,0:106:4031:0:0:0,-31.9092,-362.881 0|0:119:118,1:118:4454:1:28:0,-33.0228,-398.141 0|1:98:78,20:78:2913:20:788:-41.7412,0,-232.846 0|1:99:88,11:88:3310:11:428:-9.07041,0,-268.25 dDocent_Contig_4314 13 . T A 239.939 . AB=0.126016;ABP=301.861;AC=3;AF=0.25;AN=12;AO=42;CIGAR=1X;DP=459;DPB=459;DPRA=0;EPP=94.2121;EPPR=906.343;GTI=0;LEN=1;MEANALT=1.16667;MQM=46.7143;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997596;PAO=0;PQA=0;PQR=0;PRO=0;QA=1667;QR=14897;RO=416;RPL=0;RPP=94.2121;RPPR=906.343;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=416;SRP=906.343;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:64:58,6:58:2045:6:240:-2.43316,0,-165.031 0/1:145:125,20:125:4497:20:800:-19.3917,0,-361.205 0/0:49:45,4:45:1654:4:157:0,-0.399796,-134.777 0/0:134:129,5:129:4548:5:190:0,-23.0629,-392.166 0/1:37:31,5:31:1122:5:201:-7.36463,0,-90.2646 0/0:30:28,2:28:1031:2:79:0,-1.59683,-85.6653 dDocent_Contig_4315 98 . N C 898.875 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=29;CIGAR=2X;DP=30;DPB=32.5;DPRA=0;EPP=65.983;EPPR=0;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=990;QR=0;RO=0;RPL=29;RPP=65.983;RPPR=0;RPR=0;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:6:0,6:0:0:6:192:-17.5948,-1.80618,0 1|1:24:0,23:0:0:23:798:-71.9916,-6.92369,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_4316 12 . G A 422.855 . AB=0.191304;ABP=98.1963;AC=1;AF=0.0833333;AN=12;AO=40;CIGAR=1X;DP=550;DPB=550;DPRA=0;EPP=89.8692;EPPR=1110.46;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.996078;PAO=0;PQA=0;PQR=0;PRO=0;QA=1591;QR=20239;RO=510;RPL=0;RPP=89.8692;RPPR=1110.46;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=510;SRP=1110.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:64:61,3:61:2384:3:121:0,-7.98593,-203.426 0/0:103:97,6:97:3840:6:243:0,-8.75791,-323.371 0/0:57:55,2:55:2207:2:82:0,-9.37903,-191.017 0/0:78:77,1:77:3053:1:41:0,-19.3858,-270.761 0/0:133:127,6:127:5053:6:236:0,-18.4255,-433.036 0/1:115:93,22:93:3702:22:868:-43.8083,0,-298.578 dDocent_Contig_4317 72 . A G 31.443 . AB=0.121951;ABP=53.9075;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=246;DPB=246;DPRA=1.29091;EPP=29.068;EPPR=511.135;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.916667;PAIREDR=0.905983;PAO=0;PQA=0;PQR=0;PRO=0;QA=429;QR=8056;RO=234;RPL=12;RPP=29.068;RPPR=511.135;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=234;SRP=511.135;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:35,1:35:1130:1:37:0,-7.13925,-98.292 0/0:51:49,2:49:1679:2:70:0,-8.70541,-144.748 0/0:44:43,1:43:1456:1:39:0,-9.34875,-127.427 0/1:41:36,5:36:1260:5:185:-4.66686,0,-101.349 0/0:33:33,0:33:1179:0:0:0,-9.93399,-106.408 0/0:41:38,3:38:1352:3:98:0,-3.20202,-112.829 dDocent_Contig_4318 37 . T G 14970 . AB=0.0539546;ABP=2821.56;AC=1;AF=0.0833333;AN=12;AO=88;CIGAR=1X3M1X2M;DP=2762;DPB=3019.86;DPRA=0;EPP=194.1;EPPR=4196.12;GTI=0;LEN=1;MEANALT=4.75;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3406;QR=76120;RO=1931;RPL=0;RPP=194.1;RPPR=4196.12;RPR=88;RUN=1;SAF=88;SAP=194.1;SAR=0;SRF=1931;SRP=4196.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:452:291,25,109,26:291:11455:25,109,26:949,4129,1034:-250.857,-260.646,-1195.42,0,-864.487,-909.485,-253.325,-1117.82,-857.168,-1187.8 0|0:496:368,17,108,1:368:14533:17,108,1:661,4169,41:-231.578,-288.037,-1478.76,0,-1141.53,-1163.33,-338.973,-1480.49,-1192.46,-1534.51 0|1:269:238,24,4,2:238:9413:24,4,2:939,155,78:-5.59597,0,-767.454,-64.5064,-761.945,-837.947,-70.8289,-768.267,-832.739,-844.871 0|0:414:306,22,75,8:306:12017:22,75,8:857,2845,318:-141.125,-162.802,-1144.5,0,-917.879,-965.737,-207.058,-1124.94,-962.133,-1192.96 0|0:592:330,0,0,258:330:12967:0,0,258:0,0,10297:-748.802,-848.141,-1914.65,-848.141,-1914.65,-1914.65,0,-1066.65,-1066.65,-988.982 0|0:539:398,0,63,75:398:15735:0,63,75:0,2396,3033:-130.263,-250.073,-1544.94,-53.6035,-1348.46,-1329.49,0,-1294.88,-1098.4,-1272.3 dDocent_Contig_4319 97 . T G 14156 . AB=0.229529;ABP=2998.34;AC=5;AF=0.416667;AN=12;AO=1154;CIGAR=1X;DP=5410;DPB=5410;DPRA=0;EPP=2508.89;EPPR=9236.11;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=59.9984;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=1;PAIREDR=0.999765;PAO=0;PQA=0;PQR=0;PRO=0;QA=33689;QR=134493;RO=4252;RPL=1154;RPP=2508.89;RPPR=9236.11;RPR=0;RUN=1;SAF=1154;SAP=2508.89;SAR=0;SRF=4252;SRP=9236.11;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:800:697,103:697:21925:103:2997:-29.146,0,-1732.25 0/1:893:784,108:784:24514:108:3149:-14.9254,0,-1937.31 0/1:632:492,139:492:15706:139:4171:-185.604,0,-1223.48 0/0:696:623,72:623:19594:72:2107:0,-19.4649,-1573.45 0/1:1251:855,395:855:27212:395:11513:-659.922,0,-2072.43 0/1:1138:801,337:801:25542:337:9752:-535.226,0,-1955.92 dDocent_Contig_4320 98 . N A 84.1013 . AB=0;ABP=0;AC=2;AF=0.5;AN=4;AO=3;CIGAR=1X;DP=4;DPB=4;DPRA=3;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=85;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:85:-7.93139,-0.90309,0 0/0:1:0,0:0:0:0:0:0,0,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_4321 46 . G A 192.529 . AB=0.149425;ABP=95.8844;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=1168;DPB=1168;DPRA=0.294695;EPP=39.9253;EPPR=2493.7;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998262;PAO=0;PQA=0;PQR=0;PRO=0;QA=682;QR=45100;RO=1151;RPL=0;RPP=39.9253;RPPR=2493.7;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=1151;SRP=2502.38;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:238:238,0:238:9263:0:0:0,-71.6451,-833.171 0/0:247:247,0:247:9712:0:0:0,-74.3544,-873.544 0/0:183:183,0:183:7235:0:0:0,-55.0885,-650.822 0/0:350:350,0:350:13710:0:0:0,-105.36,-1232.96 0/1:87:74,13:74:2908:13:518:-20.7758,0,-235.629 0/0:63:59,4:59:2272:4:164:0,-3.81499,-189.498 dDocent_Contig_4322 20 . T A 4481.52 . AB=0.144423;ABP=2307.03;AC=5;AF=0.416667;AN=12;AO=338;CIGAR=1X;DP=2530;DPB=2530;DPRA=0;EPP=736.968;EPPR=4762.88;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0976331;PAIREDR=0.968066;PAO=0;PQA=0;PQR=0;PRO=0;QA=13475;QR=87324;RO=2192;RPL=0;RPP=736.968;RPPR=4762.88;RPR=338;RUN=1;SAF=338;SAP=736.968;SAR=0;SRF=2192;SRP=4762.88;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:325:277,48:277:10996:48:1940:-76.958,0,-891.078 0/1:500:413,87:413:16512:87:3454:-160.381,0,-1334.24 0/1:486:428,58:428:17172:58:2320:-62.662,0,-1397.75 0/1:376:320,56:320:12756:56:2234:-88.0416,0,-1033.93 0/0:432:397,35:397:15769:35:1384:0,-5.23003,-1293.15 0/1:411:357,54:357:14119:54:2143:-69.3314,0,-1145.93 dDocent_Contig_4323 49 . G A 3586.81 . AB=0.109855;ABP=1639.78;AC=2;AF=0.166667;AN=12;AO=136;CIGAR=1X2M1X4M;DP=1238;DPB=1238;DPRA=0;EPP=298.331;EPPR=2042.02;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5291;QR=35950;RO=939;RPL=136;RPP=298.331;RPPR=2042.02;RPR=0;RUN=1;SAF=136;SAP=298.331;SAR=0;SRF=939;SRP=2042.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:247:218,3,2,24:218:8352:3,2,24:115,73,952:-12.7499,-68.9371,-753.438,-72.4126,-748.377,-757.214,0,-675.982,-679.457,-678.196 0|0:261:206,7,8,39:206:7841:7,8,39:280,282,1557:-66.2332,-105.179,-746.162,-105.295,-725.313,-745.97,0,-620.038,-620.147,-631.364 0|0:109:83,8,0,17:83:3138:8,0,17:317,0,691:-32.0213,-30.9166,-285.685,-57.0068,-288.093,-314.186,0,-231.093,-257.187,-252.069 0|0:165:83,34,11,37:83:3202:34,11,37:1305,420,1457:-94.8596,-12.7429,-265.443,-85.3869,-241.22,-345.013,0,-155.836,-228.482,-251.802 0|1:219:156,55,0,7:156:6003:55,0,7:2155,0,282:-130.233,0,-476.267,-177.194,-492.823,-670.024,-153.949,-469.579,-646.781,-644.673 0|1:237:193,29,0,12:193:7414:29,0,12:1119,0,467:-33.8058,0,-599.875,-91.9046,-608.605,-700.491,-53.5238,-570.228,-662.115,-658.503 dDocent_Contig_4324 11 . A T 1906.96 . AB=0.201717;ABP=363.139;AC=4;AF=0.333333;AN=12;AO=94;CIGAR=1X;DP=596;DPB=596;DPRA=1.79231;EPP=207.129;EPPR=1060.67;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=56.4489;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.675351;PAO=0;PQA=0;PQR=0;PRO=0;QA=3739;QR=19965;RO=499;RPL=0;RPP=207.129;RPPR=1086.58;RPR=94;RUN=1;SAF=94;SAP=207.129;SAR=0;SRF=496;SRP=1060.67;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:69:52,17:52:2079:17:651:-38.1365,0,-165.967 0/1:200:169,31:169:6742:31:1225:-50.3164,0,-536.188 0/1:117:79,35:79:3171:35:1423:-93.5926,0,-248.563 0/1:80:69,11:69:2771:11:440:-15.8722,0,-222.922 0/0:64:64,0:64:2551:0:0:0,-19.2659,-228.182 0/0:66:66,0:66:2651:0:0:0,-19.868,-238.388 dDocent_Contig_4325 14 . A T 5374.38 . AB=0.367347;ABP=85.3933;AC=6;AF=0.5;AN=12;AO=198;CIGAR=1X;DP=539;DPB=539;DPRA=0;EPP=432.962;EPPR=743.482;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.969697;PAIREDR=0.970674;PAO=0;PQA=0;PQR=0;PRO=0;QA=7882;QR=13559;RO=341;RPL=0;RPP=432.962;RPPR=743.482;RPR=198;RUN=1;SAF=198;SAP=432.962;SAR=0;SRF=341;SRP=743.482;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:81:61,20:61:2446:20:732:-41.799,0,-195.9 0/1:97:51,46:51:2028:46:1842:-136.784,0,-153.512 0/1:89:63,26:63:2473:26:1029:-66.1096,0,-195.917 0/1:65:50,15:50:2005:15:596:-34.4092,0,-161.078 0/1:100:73,27:73:2890:27:1081:-67.4745,0,-230.108 0/1:107:43,64:43:1717:64:2602:-202.083,0,-122.544 dDocent_Contig_4326 13 . T A 869.144 . AB=0.175676;ABP=273.447;AC=2;AF=0.166667;AN=12;AO=71;CIGAR=1X;DP=730;DPB=730;DPRA=5.3871;EPP=157.185;EPPR=1434.01;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2736;QR=26035;RO=659;RPL=0;RPP=157.185;RPPR=1434.01;RPR=71;RUN=1;SAF=71;SAP=157.185;SAR=0;SRF=659;SRP=1434.01;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:153:142,11:142:5660:11:439:0,-6.19242,-469.376 0/0:219:211,8:211:8319:8:312:0,-37.4858,-719.89 0/1:140:110,30:110:4369:30:1136:-60.3785,0,-351.038 0/1:156:134,22:134:5235:22:849:-29.7577,0,-424.091 0/0:35:35,0:35:1386:0:0:0,-10.536,-125.003 0/0:27:27,0:27:1066:0:0:0,-8.12781,-96.2343 dDocent_Contig_4327 98 . N A 421.463 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=13;CIGAR=1X;DP=13;DPB=13;DPRA=0;EPP=31.2394;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=441;QR=0;RO=0;RPL=13;RPP=31.2394;RPPR=0;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:105:-9.79616,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:140:-12.9449,-1.20412,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:3:0,3:0:0:3:98:-9.14405,-0.90309,0 1/1:2:0,2:0:0:2:63:-5.98364,-0.60206,0 dDocent_Contig_4328 17 . T C 37667.6 . AB=0.588302;ABP=122.276;AC=7;AF=0.583333;AN=12;AO=1197;CIGAR=1X;DP=1931;DPB=1931;DPRA=0;EPP=2602.26;EPPR=1596.87;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998329;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=48236;QR=29377;RO=734;RPL=0;RPP=2602.26;RPPR=1596.87;RPR=1197;RUN=1;SAF=1197;SAP=2602.26;SAR=0;SRF=734;SRP=1596.87;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:230:65,165:65:2587:165:6630:-527.149,0,-163.73 0/1:282:67,215:67:2682:215:8634:-691.643,0,-156.603 0/1:207:39,168:39:1570:168:6751:-544.945,0,-79.2196 1/1:170:9,161:9:355:161:6516:-553.821,-18.8673,0 0/1:574:301,273:301:12074:273:11025:-818.652,0,-912.977 0/1:468:253,215:253:10109:215:8680:-639.774,0,-768.236 dDocent_Contig_4329 12 . A G 591.144 . AB=0.178218;ABP=184.683;AC=3;AF=0.25;AN=12;AO=40;CIGAR=1X2M1X;DP=378;DPB=378;DPRA=0.756962;EPP=89.8692;EPPR=734.797;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997033;PAO=0;PQA=0;PQR=0;PRO=0;QA=1535;QR=13240;RO=337;RPL=0;RPP=89.8692;RPPR=734.797;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=337;SRP=734.797;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:40:31,9:31:1189:9:352:-20.0006,0,-95.2534 0|1:62:52,9:52:2027:9:343:-12.5539,0,-163.971 0|1:100:82,18:82:3250:18:684:-31.7817,0,-262.475 0|0:43:41,2:41:1619:2:78:0,-5.54082,-138.549 0|0:54:52,2:52:2067:2:78:0,-8.85215,-178.824 0|0:79:79,0:79:3088:0:0:0,-23.7814,-278.022 dDocent_Contig_4330 18 . G A 967.388 . AB=0.140684;ABP=592.875;AC=3;AF=0.25;AN=12;AO=84;CIGAR=1X;DP=1140;DPB=1140;DPRA=0.710191;EPP=185.414;EPPR=2296.09;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8883;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.971591;PAO=0;PQA=0;PQR=0;PRO=0;QA=3261;QR=40136;RO=1056;RPL=0;RPP=185.414;RPPR=2296.09;RPR=84;RUN=1;SAF=84;SAP=185.414;SAR=0;SRF=1056;SRP=2296.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:143:133,10:133:5053:10:379:0,-8.58743,-420.045 0/1:196:161,35:161:6104:35:1353:-63.0449,0,-490.314 0/1:204:184,20:184:7018:20:785:-9.55904,0,-569.571 0/1:126:107,19:107:4117:19:744:-29.3567,0,-332.676 0/0:255:255,0:255:9716:0:0:0,-76.7626,-874.105 0/0:216:216,0:216:8128:0:0:0,-65.0225,-731.334 dDocent_Contig_4331 19 . G C 6334.88 . AB=0.142857;ABP=289.955;AC=0;AF=0;AN=12;AO=37;CIGAR=2M1X25M;DP=546;DPB=533.107;DPRA=0;EPP=83.3548;EPPR=454.677;GTI=0;LEN=1;MEANALT=6.5;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=1;PAIREDR=0.966346;PAO=0;PQA=0;PQR=0;PRO=0;QA=1435;QR=7942;RO=208;RPL=0;RPP=83.3548;RPPR=454.677;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=208;SRP=454.677;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:76:52,6,0,4,14,0:52:1970:6,0,4,14,0:227,0,146,545,0:-29.1395,-26.1877,-185.884,-44.793,-187.69,-206.297,-32.8691,-175.764,-194.37,-193.166,0,-142.905,-161.511,-149.585,-157.297,-44.793,-187.69,-206.297,-194.37,-161.511,-206.297 0|0:62:30,6,0,8,17,0:30:1146:6,0,8,17,0:209,0,254,647,0:-44.0502,-36.0945,-128.317,-53.0811,-130.123,-147.11,-32.6545,-109.692,-126.677,-124.269,0,-77.0626,-94.0489,-73.619,-88.9314,-53.0811,-130.123,-147.11,-126.677,-94.0489,-147.11 0|0:67:34,4,5,1,22,0:34:1302:4,5,1,22,0:153,196,36,836,0:-58.318,-55.9965,-161.644,-52.4314,-146.729,-157.78,-65.616,-159.911,-156.348,-172.166,0,-94.3093,-90.7449,-103.928,-100.242,-68.5531,-162.849,-159.285,-172.467,-106.865,-175.404 0|0:82:40,12,0,6,22,0:40:1523:12,0,6,22,0:451,0,205,867,0:-59.306,-34.4001,-155.708,-71.3472,-159.321,-196.267,-54.7175,-142.689,-179.635,-177.828,0,-87.9876,-124.935,-108.303,-118.313,-71.3472,-159.321,-196.267,-179.635,-124.935,-196.267 0|0:139:31,11,0,0,70,23:31:1203:11,0,0,70,23:427,0,0,2702,888:-212.542,-186.788,-282.321,-221.874,-285.632,-320.718,-221.874,-285.632,-320.718,-320.718,0,-63.766,-98.8538,-98.8538,-77.7817,-148.954,-212.714,-247.8,-247.8,-25.9301,-240.876 0|0:120:21,4,0,0,78,14:21:798:4,0,0,78,14:147,0,0,3016,547:-241.354,-235.66,-299.894,-247.676,-301.098,-313.114,-247.676,-301.098,-313.114,-313.114,0,-53.4204,-65.4359,-65.4359,-41.9555,-202.709,-256.131,-268.148,-268.148,-20.4665,-263.933 dDocent_Contig_4332 12 . A G 20982.3 . AB=0.351316;ABP=440.813;AC=4;AF=0.333333;AN=12;AO=805;CIGAR=1X;DP=2909;DPB=2909;DPRA=1.56303;EPP=1751.05;EPPR=4571.79;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9976;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999049;PAO=0;PQA=0;PQR=0;PRO=0;QA=31193;QR=83519;RO=2104;RPL=0;RPP=1751.05;RPPR=4571.79;RPR=805;RUN=1;SAF=805;SAP=1751.05;SAR=0;SRF=2104;SRP=4571.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:640:366,274:366:14544:274:10638:-764.207,0,-1115.22 0/1:719:462,257:462:18315:257:9920:-675.844,0,-1430.47 0/1:458:313,145:313:12369:145:5587:-364.834,0,-974.499 0/1:463:338,125:338:13409:125:4889:-300.568,0,-1066.48 0/0:330:330,0:330:13122:0:0:0,-99.3399,-1180.06 0/0:299:295,4:295:11760:4:159:0,-75.3171,-1042.91 dDocent_Contig_4333 98 . N A 260.847 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=265;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:3:0,3:0:0:3:77:-7.18463,-0.90309,0 1/1:2:0,2:0:0:2:50:-4.74945,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_4334 179 . C A 39.941 . AB=0.125;ABP=42.0968;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=188;DPB=188;DPRA=1.02564;EPP=11.6962;EPPR=402.561;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.793478;PAO=0;PQA=0;PQR=0;PRO=0;QA=164;QR=7330;RO=184;RPL=4;RPP=11.6962;RPPR=402.561;RPR=0;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=402.561;SRR=184;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:941:0:0:0,-7.22472,-84.9906 0/0:31:31,0:31:1241:0:0:0,-9.33193,-111.96 0/0:41:41,0:41:1658:0:0:0,-12.3422,-149.442 0/1:32:28,4:28:1102:4:164:-5.51694,0,-89.8242 0/0:37:37,0:37:1463:0:0:0,-11.1381,-131.912 0/0:23:23,0:23:925:0:0:0,-6.92369,-83.5523 dDocent_Contig_4336 17 . C A 4445.33 . AB=0.127119;ABP=145.518;AC=0;AF=0;AN=12;AO=15;CIGAR=1M1I8M2X1M;DP=407;DPB=424;DPRA=0;EPP=35.5824;EPPR=452.505;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.932367;PAO=0;PQA=0;PQR=0;PRO=0;QA=556;QR=8126;RO=207;RPL=0;RPP=35.5824;RPPR=452.505;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=207;SRP=452.505;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:60:35,0,0,24:35:1370:0,0,24:0,0,895:-62.7536,-73.2896,-185.949,-73.2896,-185.949,-185.949,0,-112.689,-112.689,-105.464 0|0:97:37,0,6,50:37:1455:0,6,50:0,225,1868:-141.807,-152.945,-272.635,-134.514,-254.206,-252.4,0,-119.698,-101.27,-104.647 0|0:62:32,0,0,30:32:1263:0,0,30:0,0,1138:-84.058,-93.6909,-197.622,-93.6909,-197.622,-197.622,0,-104.317,-104.317,-95.2864 0|0:70:41,0,0,27:41:1612:0,0,27:0,0,1021:-71.358,-83.7002,-216.305,-83.7002,-216.305,-216.305,0,-132.618,-132.618,-124.49 0|0:61:39,7,0,13:39:1538:7,0,13:265,0,495:-28.8761,-18.8877,-143.344,-40.6162,-145.451,-167.175,0,-104.85,-126.574,-122.661 0|0:57:23,8,0,24:23:888:8,0,24:291,0,901:-66.9032,-50.0635,-120.589,-73.8269,-122.998,-146.76,0,-49.1924,-72.9535,-65.7288 dDocent_Contig_4337 186 . G C 221.212 . AB=0.136752;ABP=137.103;AC=1;AF=0.0833333;AN=12;AO=21;CIGAR=1X;DP=698;DPB=698;DPRA=1.35811;EPP=48.6112;EPPR=1473.1;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.980798;PAO=0;PQA=0;PQR=0;PRO=0;QA=842;QR=27377;RO=677;RPL=21;RPP=48.6112;RPPR=1473.1;RPR=0;RUN=1;SAF=0;SAP=48.6112;SAR=21;SRF=0;SRP=1473.1;SRR=677;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:117:101,16:101:4114:16:647:-23.3431,0,-334.976 0/0:141:139,2:139:5610:2:76:0,-35.2304,-497.469 0/0:73:73,0:73:2932:0:0:0,-21.9752,-263.962 0/0:144:141,3:141:5694:3:119:0,-32.2538,-501.13 0/0:122:122,0:122:4955:0:0:0,-36.7257,-445.799 0/0:101:101,0:101:4072:0:0:0,-30.404,-366.439 dDocent_Contig_4338 98 . N A 1988 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=75;CIGAR=1X;DP=75;DPB=75;DPRA=0;EPP=165.871;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2184;QR=0;RO=0;RPL=75;RPP=165.871;RPPR=0;RPR=0;RUN=1;SAF=75;SAP=165.871;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:17:0,17:0:0:17:431:-39.0359,-5.11751,0 1/1:4:0,4:0:0:4:73:-6.75186,-1.20412,0 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 1/1:2:0,2:0:0:2:17:-1.61499,-0.60206,0 1/1:38:0,38:0:0:38:1222:-110.266,-11.4391,0 1/1:13:0,13:0:0:13:412:-37.3844,-3.91339,0 dDocent_Contig_4339 15 . G T 165.669 . AB=0.142857;ABP=103.829;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=367;DPB=367;DPRA=1.02762;EPP=33.4109;EPPR=743.704;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.983003;PAO=0;PQA=0;PQR=0;PRO=0;QA=555;QR=14005;RO=353;RPL=0;RPP=33.4109;RPPR=769.54;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=350;SRP=743.704;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:47:41,6:41:1642:6:240:-7.82674,0,-133.864 0/1:44:37,7:37:1475:7:276:-11.962,0,-119.753 0/0:36:36,0:36:1422:0:0:0,-10.8371,-128.23 0/0:91:91,0:91:3581:0:0:0,-27.3937,-322.338 0/0:95:94,1:94:3738:1:39:0,-24.7013,-332.539 0/0:54:54,0:54:2147:0:0:0,-16.2556,-193.41 dDocent_Contig_4340 14 . A C 335.039 . AB=0.254545;ABP=31.7922;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=370;DPB=370;DPRA=0.873016;EPP=33.4109;EPPR=776.054;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.714286;PAIREDR=0.808989;PAO=0;PQA=0;PQR=0;PRO=0;QA=566;QR=13890;RO=356;RPL=0;RPP=33.4109;RPPR=776.054;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=356;SRP=776.054;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:55:41,14:41:1610:14:566:-34.7257,0,-128.594 0/0:84:84,0:84:3289:0:0:0,-25.2865,-296.103 0/0:28:28,0:28:1113:0:0:0,-8.42884,-100.461 0/0:66:66,0:66:2521:0:0:0,-19.868,-227.063 0/0:70:70,0:70:2753:0:0:0,-21.0721,-247.914 0/0:67:67,0:67:2604:0:0:0,-20.169,-234.519 dDocent_Contig_4341 1 . N G 66.4848 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=70;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_4342 88 . C G 4111.73 . AB=0.197379;ABP=1034.71;AC=3;AF=0.25;AN=12;AO=282;CIGAR=1X;DP=2220;DPB=2220;DPRA=0;EPP=615.366;EPPR=4211.32;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9864;QR=67139;RO=1938;RPL=282;RPP=615.366;RPPR=4211.32;RPR=0;RUN=1;SAF=282;SAP=615.366;SAR=0;SRF=1938;SRP=4211.32;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:325:322,3:322:10937:3:105:0,-88.0386,-974.53 0/0:323:315,8:315:10682:8:278:0,-71.8747,-936.022 0/1:388:344,44:344:12011:44:1530:-21.1871,0,-964.08 0/0:275:260,15:260:9042:15:524:0,-35.2942,-766.289 0/1:438:327,111:327:11464:111:3887:-218.178,0,-899.812 0/1:471:370,101:370:13003:101:3540:-177.03,0,-1028.33 dDocent_Contig_4343 56 . A G 89.79 . AB=0.117647;ABP=110.945;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=556;DPB=556;DPRA=0.635071;EPP=26.8965;EPPR=1186.46;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.924771;PAO=0;PQA=0;PQR=0;PRO=0;QA=438;QR=21568;RO=545;RPL=11;RPP=26.8965;RPPR=1186.46;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=545;SRP=1186.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:91:91,0:91:3601:0:0:0,-27.3937,-324.111 0/1:85:75,10:75:2920:10:397:-10.5019,0,-237.311 0/0:49:48,1:48:1953:1:41:0,-10.6559,-171.86 0/0:77:77,0:77:3060:0:0:0,-23.1793,-275.492 0/0:138:138,0:138:5474:0:0:0,-41.5421,-492.496 0/0:116:116,0:116:4560:0:0:0,-34.9195,-410.344 dDocent_Contig_4344 36 . A G 7985.92 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=12;CIGAR=8M1X4M;DP=1032;DPB=1054.92;DPRA=0.909871;EPP=29.068;EPPR=1486.13;GTI=0;LEN=1;MEANALT=6;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=482;QR=26722;RO=683;RPL=0;RPP=29.068;RPPR=1486.13;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=683;SRP=1486.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:134:57,74,3,0:57:2243:74,3,0:2878,111,0:-219.335,0,-162.256,-227.414,-175.453,-411.023,-236.494,-184.532,-411.926,-421.006 0|0:172:100,62,0,0:100:3864:62,0,0:2424,0,0:-169.218,0,-298.713,-199.321,-317.376,-516.655,-199.321,-317.376,-516.655,-516.655 0|0:148:58,81,5,0:58:2275:81,5,0:3174,198,0:-243.512,0,-162.719,-244.675,-170.806,-430.259,-260.971,-187.102,-431.764,-448.06 0|0:133:63,59,9,0:63:2500:59,9,0:2341,364,0:-173.749,0,-188.054,-162.701,-175.802,-365.797,-192.714,-205.815,-368.506,-398.519 0|0:233:216,12,0,0:216:8460:12,0,0:461,0,0:0,-27.1501,-719.217,-65.0225,-722.829,-760.669,-65.0225,-722.829,-760.669,-760.669 0|0:212:189,4,0,12:189:7380:4,0,12:157,0,482:0,-43.9844,-649.436,-56.8947,-650.64,-663.551,-17.1735,-610.921,-623.832,-620.22 dDocent_Contig_4345 9 . T A 129.076 . AB=0.0979228;ABP=476.23;AC=1;AF=0.0833333;AN=12;AO=110;CIGAR=1M1D1X;DP=2505;DPB=2468;DPRA=0;EPP=241.872;EPPR=5184.14;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4204;QR=90432;RO=2386;RPL=0;RPP=241.872;RPPR=5184.14;RPR=110;RUN=1;SAF=110;SAP=241.872;SAR=0;SRF=2386;SRP=5184.14;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:479:469,9:469:17715:9:349:0,-112.502,-1561.79 0|0:445:433,10:433:16446:10:386:0,-98.4692,-1444.34 0|0:500:479,18:479:18145:18:672:0,-89.0304,-1571.43 0|0:467:436,31:436:16517:31:1183:0,-33.8125,-1379.03 0|0:277:268,9:268:10154:9:337:0,-52.7038,-882.877 0|1:337:301,33:301:11455:33:1277:-14.4305,0,-929.772 dDocent_Contig_4346 109 . G A 677.391 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=23;CIGAR=1X;DP=24;DPB=24;DPRA=0;EPP=52.9542;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=58;NS=4;NUMALT=1;ODDS=0;PAIRED=0.695652;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=770;QR=35;RO=1;RPL=0;RPP=52.9542;RPPR=5.18177;RPR=23;RUN=1;SAF=0;SAP=52.9542;SAR=23;SRF=0;SRP=5.18177;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:5:0,5:0:0:5:170:-15.6348,-1.50515,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:3:0,3:0:0:3:101:-9.4236,-0.90309,0 1/1:15:1,14:1:35:14:464:-38.5791,-1.01762,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_4347 31 . T A 1901.99 . AB=0.352657;ABP=42.0444;AC=6;AF=0.5;AN=12;AO=73;CIGAR=1X;DP=207;DPB=207;DPRA=0;EPP=161.528;EPPR=293.988;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.863014;PAIREDR=0.977612;PAO=0;PQA=0;PQR=0;PRO=0;QA=2903;QR=5396;RO=134;RPL=0;RPP=161.528;RPPR=293.988;RPR=73;RUN=1;SAF=73;SAP=161.528;SAR=0;SRF=134;SRP=293.988;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:15,19:15:596:19:766:-59.0268,0,-43.7353 0/1:26:20,6:20:812:6:238:-13.9663,0,-65.5678 0/1:21:11,10:11:448:10:402:-30.2184,0,-34.3543 0/1:33:11,22:11:443:22:858:-67.5992,0,-30.2908 0/1:57:52,5:52:2098:5:205:-1.6763,0,-171.838 0/1:36:25,11:25:999:11:434:-28.5767,0,-79.3676 dDocent_Contig_4348 32 . T C 5232.96 . AB=0.303338;ABP=234.469;AC=6;AF=0.5;AN=12;AO=209;CIGAR=1X;DP=689;DPB=689;DPRA=0;EPP=456.848;EPPR=1043.15;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.990431;PAIREDR=0.983299;PAO=0;PQA=0;PQR=0;PRO=0;QA=8227;QR=18887;RO=479;RPL=0;RPP=456.848;RPPR=1043.15;RPR=209;RUN=1;SAF=209;SAP=456.848;SAR=0;SRF=479;SRP=1043.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:71:48,23:48:1880:23:923:-62.0041,0,-148.042 0/1:89:58,30:58:2282:30:1191:-80.5746,0,-178.661 0/1:165:108,57:108:4280:57:2229:-151.126,0,-335.514 0/1:91:61,30:61:2404:30:1169:-78.1065,0,-189.12 0/1:126:90,36:90:3525:36:1406:-88.8756,0,-279.382 0/1:147:114,33:114:4516:33:1309:-73.8316,0,-362.15 dDocent_Contig_4349 98 . N A 9197.98 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=299;CIGAR=2X;DP=299;DPB=299.5;DPRA=0;EPP=652.281;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=1;PQA=35;PQR=0;PRO=0;QA=10196;QR=0;RO=0;RPL=299;RPP=652.281;RPPR=0;RPR=0;RUN=1;SAF=299;SAP=652.281;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1|1:13:0,13:0:0:13:445:-40.3784,-3.91339,0 1|1:3:0,3:0:0:3:103:-9.61002,-0.90309,0 1|1:40:0,40:0:0:40:1349:-121.704,-12.0412,0 1|1:142:0,142:0:0:142:4856:-437.226,-42.7463,0 1|1:100:0,100:0:0:100:3408:-306.602,-30.103,0 dDocent_Contig_4350 12 . G A 4712.86 . AB=0.236343;ABP=544.617;AC=2;AF=0.166667;AN=12;AO=212;CIGAR=1M1D3M1X;DP=2960;DPB=2924.5;DPRA=0.869607;EPP=463.362;EPPR=5941.99;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999269;PAO=0;PQA=0;PQR=0;PRO=0;QA=8257;QR=105636;RO=2735;RPL=0;RPP=463.362;RPPR=5941.99;RPR=212;RUN=1;SAF=212;SAP=463.362;SAR=0;SRF=2735;SRP=5941.99;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:490:489,0:489:18817:0:0:0,-147.204,-1692.15 0|0:532:530,0:530:20513:0:0:0,-159.546,-1844.74 0|0:412:411,0:411:15885:0:0:0,-123.723,-1428.51 0|0:629:627,0:627:24211:0:0:0,-188.746,-2177.2 0|1:548:407,139:407:15698:139:5419:-322.895,0,-1247.23 0|1:349:271,73:271:10512:73:2838:-151.613,0,-841.677 dDocent_Contig_4351 15 . G T 375.581 . AB=0.102293;ABP=781.987;AC=1;AF=0.0833333;AN=12;AO=85;CIGAR=1X;DP=2859;DPB=2859;DPRA=0.775201;EPP=187.585;EPPR=6020.16;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998196;PAO=0;PQA=0;PQR=0;PRO=0;QA=3415;QR=110130;RO=2771;RPL=0;RPP=187.585;RPPR=6020.16;RPR=85;RUN=1;SAF=85;SAP=187.585;SAR=0;SRF=2771;SRP=6020.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:472:470,2:470:18588:2:82:0,-134.306,-1663.68 0/1:567:509,58:509:20185:58:2329:-39.081,0,-1644.29 0/0:273:255,17:255:10164:17:684:0,-20.3524,-852.207 0/0:426:418,8:418:16619:8:320:0,-99.0717,-1465.24 0/0:559:557,0:557:22157:0:0:0,-167.674,-1991.85 0/0:562:562,0:562:22417:0:0:0,-169.179,-2015.63 dDocent_Contig_4352 30 . G A 5772.49 . AB=0.516971;ABP=3.96847;AC=6;AF=0.5;AN=12;AO=198;CIGAR=1X;DP=383;DPB=383;DPRA=0;EPP=432.962;EPPR=404.733;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.853535;PAIREDR=0.805405;PAO=0;PQA=0;PQR=0;PRO=0;QA=7802;QR=7322;RO=185;RPL=0;RPP=432.962;RPPR=404.733;RPR=198;RUN=1;SAF=198;SAP=432.962;SAR=0;SRF=185;SRP=404.733;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:59:41,18:41:1599:18:689:-44.5679,0,-126.385 0/1:76:41,35:41:1613:35:1346:-98.5141,0,-122.528 0/1:67:46,21:46:1823:21:841:-55.8356,0,-144.114 0/1:67:21,46:21:838:46:1834:-145.106,0,-55.5661 0/1:53:8,45:8:313:45:1765:-143.117,0,-12.5781 0/1:61:28,33:28:1136:33:1327:-101.33,0,-84.1554 dDocent_Contig_4353 78 . A T 96.2382 . AB=0.11828;ABP=120.713;AC=1;AF=0.0833333;AN=12;AO=23;CIGAR=1X;DP=1328;DPB=1328;DPRA=0.72963;EPP=52.9542;EPPR=2823.75;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.976135;PAO=0;PQA=0;PQR=0;PRO=0;QA=900;QR=49350;RO=1299;RPL=23;RPP=52.9542;RPPR=2823.75;RPR=0;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=1299;SRP=2823.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:199:191,7:191:7207:7:272:0,-34.9015,-623.693 0/0:294:292,1:292:10948:1:39:0,-84.66,-981.09 0/1:93:82,11:82:3219:11:431:-11.1467,0,-261.787 0/0:202:198,4:198:7740:4:158:0,-46.2087,-681.645 0/0:250:247,0:247:9305:0:0:0,-74.3544,-836.831 0/0:290:289,0:289:10931:0:0:0,-86.9977,-983.034 dDocent_Contig_4354 45 . C A 1366.75 . AB=0.126305;ABP=1165.03;AC=3;AF=0.25;AN=12;AO=157;CIGAR=1X;DP=2252;DPB=2252;DPRA=0;EPP=343.931;EPPR=4552.24;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6210;QR=84035;RO=2095;RPL=0;RPP=343.931;RPPR=4552.24;RPR=157;RUN=1;SAF=157;SAP=343.931;SAR=0;SRF=2095;SRP=4552.24;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:306:273,33:273:10958:33:1276:-23.0016,0,-893.337 0/1:370:313,57:313:12627:57:2264:-92.5531,0,-1024.09 0/0:169:157,12:157:6302:12:470:0,-8.2237,-524.258 0/1:282:251,31:251:10064:31:1233:-26.3423,0,-820.215 0/0:719:698,21:698:28048:21:852:0,-139.45,-2444.72 0/0:406:403,3:403:16036:3:115:0,-111.493,-1431.24 dDocent_Contig_4355 89 . A T 51.0044 . AB=0.190476;ABP=20.4855;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=182;DPB=182;DPRA=0.75;EPP=20.3821;EPPR=380.846;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.625;PAIREDR=0.747126;PAO=0;PQA=0;PQR=0;PRO=0;QA=279;QR=5881;RO=174;RPL=8;RPP=20.3821;RPPR=380.846;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=174;SRP=380.846;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:37,3:37:1204:3:104:0,-2.33811,-98.9443 0/1:21:17,4:17:584:4:140:-6.6233,0,-46.5633 0/0:17:16,1:16:525:1:35:0,-1.61888,-44.0641 0/0:32:32,0:32:1103:0:0:0,-9.63296,-99.5786 0/0:38:38,0:38:1308:0:0:0,-11.4391,-118.021 0/0:34:34,0:34:1157:0:0:0,-10.235,-104.434 dDocent_Contig_4356 30 . G A 53.3439 . AB=0.0941558;ABP=443.65;AC=3;AF=0.25;AN=12;AO=48;CIGAR=1X;DP=889;DPB=889;DPRA=0.793296;EPP=107.241;EPPR=1816.19;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.994012;PAO=0;PQA=0;PQR=0;PRO=0;QA=1871;QR=32653;RO=835;RPL=0;RPP=107.241;RPPR=1816.19;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=835;SRP=1816.19;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:136:123,13:123:4805:13:510:-5.30263,0,-391.437 0/0:162:153,9:153:6097:9:358:0,-16.1844,-515.918 0/1:61:55,6:55:2141:6:236:-3.24854,0,-174.508 0/1:111:101,10:101:3955:10:369:-0.131004,0,-322.531 0/0:240:228,10:228:8873:10:398:0,-35.8361,-761.938 0/0:179:175,0:175:6782:0:0:0,-52.6802,-609.762 dDocent_Contig_4357 24 . C A 8701.48 . AB=0.193462;ABP=1825.53;AC=3;AF=0.25;AN=12;AO=626;CIGAR=1X;DP=5156;DPB=5156;DPRA=0;EPP=1362.35;EPPR=9828.92;GTI=0;LEN=1;MEANALT=1.5;MQM=59.9968;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.995208;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=24816;QR=180708;RO=4525;RPL=0;RPP=1362.35;RPPR=9828.92;RPR=626;RUN=1;SAF=626;SAP=1362.35;SAR=0;SRF=4525;SRP=9828.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:768:682,84:682:27144:84:3313:-67.2423,0,-2209.55 0/0:919:873,46:873:34866:46:1823:0,-112.362,-2970.42 0/1:673:599,72:599:23885:72:2875:-56.4665,0,-1945.19 0/0:881:820,60:820:32764:60:2338:0,-54.724,-2735.12 0/0:1123:1035,88:1035:41409:88:3458:0,-26.7903,-3411.62 0/1:792:516,276:516:20640:276:11009:-751.661,0,-1617.42 dDocent_Contig_4359 22 . A G 197.632 . AB=0.147727;ABP=97.8642;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=567;DPB=567;DPRA=0.91858;EPP=31.2394;EPPR=1206.01;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.944043;PAO=0;PQA=0;PQR=0;PRO=0;QA=527;QR=22138;RO=554;RPL=0;RPP=31.2394;RPPR=1206.01;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=554;SRP=1206.01;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:88:88,0:88:3515:0:0:0,-26.4906,-316.385 0/0:128:128,0:128:5120:0:0:0,-38.5318,-460.67 0/0:73:73,0:73:2932:0:0:0,-21.9752,-263.966 0/0:101:101,0:101:4040:0:0:0,-30.404,-363.578 0/0:89:89,0:89:3533:0:0:0,-26.7917,-318.009 0/1:88:75,13:75:2998:13:527:-21.2861,0,-243.408 dDocent_Contig_4360 24 . T G 919.211 . AB=0.109375;ABP=427.126;AC=6;AF=0.5;AN=12;AO=35;CIGAR=7M1X;DP=456;DPB=443.875;DPRA=0;EPP=79.0118;EPPR=765.197;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1399;QR=13847;RO=351;RPL=0;RPP=79.0118;RPPR=765.197;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=351;SRP=765.197;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:82:57,2,7,14:57:2231:2,7,14:80,278,559:-28.8816,-39.45,-222.275,-23.1549,-199.991,-204.474,0,-176.836,-160.54,-179.212 0|1:79:69,1,9,0:69:2717:1,9,0:41,362,0:-9.05533,-26.4415,-249.642,0,-220.109,-220.784,-29.8264,-249.943,-223.493,-253.327 0|1:94:61,6,13,13:61:2417:6,13,13:234,529,525:-25.2771,-24.4082,-221.531,0,-179.699,-195.019,-0.358549,-180.056,-155.651,-195.377 0|1:105:84,5,15,1:84:3317:5,15,1:201,589,34:-23.1544,-31.8738,-303.315,0,-256.381,-268.43,-45.6856,-302.063,-270.188,-318.327 0|1:57:52,0,5,0:52:2049:0,5,0:0,201,0:-1.30847,-16.962,-185.52,0,-168.959,-167.454,-16.962,-185.52,-168.959,-185.52 0|1:39:28,0,3,7:28:1116:0,3,7:0,120,281:-14.7303,-23.1591,-115.061,-13.2734,-105.176,-104.273,0,-91.9069,-82.0216,-89.7996 dDocent_Contig_4361 12 . A G 31917.4 . AB=0.490817;ABP=4.6055;AC=5;AF=0.416667;AN=12;AO=1070;CIGAR=1X;DP=2413;DPB=2413;DPRA=0;EPP=2326.49;EPPR=2919.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999065;PAIREDR=0.997766;PAO=0;PQA=0;PQR=0;PRO=0;QA=42905;QR=52635;RO=1343;RPL=0;RPP=2326.49;RPPR=2919.3;RPR=1070;RUN=1;SAF=1070;SAP=2326.49;SAR=0;SRF=1343;SRP=2919.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:409:119,290:119:4645:290:11595:-919.609,0,-294.897 0/1:537:228,309:228:8929:309:12401:-953.5,0,-641.532 0/1:526:243,283:243:9627:283:11376:-864.671,0,-707.552 0/1:453:301,152:301:11662:152:6102:-412.557,0,-912.554 0/1:253:218,35:218:8530:35:1406:-50.6259,0,-691.131 0/0:235:234,1:234:9242:1:25:0,-68.2422,-828.785 dDocent_Contig_4362 14 . A G 4916.52 . AB=0.201653;ABP=938.509;AC=6;AF=0.5;AN=12;AO=244;CIGAR=1X;DP=1210;DPB=1210;DPRA=0;EPP=532.85;EPPR=2100.65;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9845;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.973085;PAO=0;PQA=0;PQR=0;PRO=0;QA=9619;QR=38279;RO=966;RPL=0;RPP=532.85;RPPR=2100.65;RPR=244;RUN=1;SAF=244;SAP=532.85;SAR=0;SRF=966;SRP=2100.65;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:196:137,59:137:5361:59:2303:-148.434,0,-423.352 0/1:208:168,40:168:6706:40:1566:-78.5625,0,-540.634 0/1:161:127,34:127:4991:34:1347:-73.0235,0,-400.606 0/1:179:129,50:129:5102:50:2000:-126.307,0,-405.117 0/1:260:221,39:221:8766:39:1525:-59.2277,0,-710.185 0/1:206:184,22:184:7353:22:878:-17.3195,0,-599.392 dDocent_Contig_4363 120 . A T 896.213 . AB=0.142222;ABP=753.5;AC=1;AF=0.0833333;AN=12;AO=147;CIGAR=1X;DP=3283;DPB=3283;DPRA=0.991652;EPP=322.217;EPPR=6812.75;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998724;PAO=0;PQA=0;PQR=0;PRO=0;QA=5048;QR=113988;RO=3136;RPL=0;RPP=322.217;RPPR=6812.75;RPR=147;RUN=1;SAF=0;SAP=322.217;SAR=147;SRF=0;SRP=6812.75;SRR=3136;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:551:551,0:551:20081:0:0:0,-165.868,-1806.66 0/0:562:559,3:559:20301:3:104:0,-159.476,-1816.76 0/0:291:286,5:286:10399:5:176:0,-71.4145,-919.578 0/0:557:547,10:547:19853:10:353:0,-135.564,-1754.06 0/1:675:579,96:579:21067:96:3268:-91.1442,0,-1692.16 0/0:647:614,33:614:22287:33:1147:0,-91.2316,-1901.56 dDocent_Contig_4364 69 . A G 8108.61 . AB=0.72335;ABP=173.73;AC=6;AF=0.5;AN=12;AO=285;CIGAR=1X;DP=394;DPB=394;DPRA=0;EPP=621.88;EPPR=237.529;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990741;PAO=0;PQA=0;PQR=0;PRO=0;QA=10432;QR=4058;RO=108;RPL=285;RPP=621.88;RPPR=237.529;RPR=0;RUN=1;SAF=285;SAP=621.88;SAR=0;SRF=108;SRP=237.529;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:12,30:12:442:30:1049:-82.0714,0,-27.4821 0/1:107:11,95:11:401:95:3343:-269.076,0,-4.42208 0/1:48:21,27:21:789:27:1024:-78.0193,0,-56.8849 0/1:99:23,76:23:886:76:2901:-231.462,0,-50.2577 0/1:71:32,39:32:1212:39:1438:-108.322,0,-88.0045 0/1:27:9,18:9:328:18:677:-53.1319,0,-21.7357 dDocent_Contig_4365 89 . A T 158.597 . AB=0.222222;ABP=33.1696;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=185;DPB=185;DPRA=1.03279;EPP=26.8965;EPPR=380.846;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.727273;PAIREDR=0.632184;PAO=0;PQA=0;PQR=0;PRO=0;QA=374;QR=6025;RO=174;RPL=11;RPP=26.8965;RPPR=380.846;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=174;SRP=380.846;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:17,1:17:588:1:34:0,-2.01963,-49.8474 0/0:42:42,0:42:1459:0:0:0,-12.6433,-131.608 0/1:45:35,10:35:1223:10:340:-17.3825,0,-96.8299 0/0:33:33,0:33:1139:0:0:0,-9.93399,-102.818 0/0:33:33,0:33:1132:0:0:0,-9.93399,-102.186 0/0:14:14,0:14:484:0:0:0,-4.21442,-43.8896 dDocent_Contig_4366 94 . G T 1090.08 . AB=0.0920502;ABP=348.492;AC=0;AF=0;AN=12;AO=22;CIGAR=1X1M1X;DP=437;DPB=437;DPRA=1.17157;EPP=50.7827;EPPR=726.111;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.987988;PAO=0;PQA=0;PQR=0;PRO=0;QA=750;QR=11448;RO=333;RPL=22;RPP=50.7827;RPPR=726.111;RPR=0;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=333;SRP=726.111;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:62:49,0,0,13:49:1671:0,0,13:0,0,424:-19.8112,-34.5617,-170.161,-34.5617,-170.161,-170.161,0,-135.928,-135.928,-132.015 0|0:85:60,2,0,23:60:2014:2,0,23:68,0,769:-44.1984,-56.7438,-219.279,-62.2602,-219.881,-225.397,0,-157.616,-163.132,-156.209 0|0:67:41,11,0,15:41:1440:11,0,15:370,0,514:-29.389,-11.7564,-125.656,-41.7312,-128.967,-158.942,0,-87.2417,-117.216,-112.701 0|0:87:57,9,8,13:57:1969:9,8,13:312,275,426:-17.2489,-9.04351,-166.325,-12.0727,-146.701,-169.654,0,-134.622,-137.65,-156.069 0|0:68:67,0,0,1:67:2306:0,0,1:0,0,34:0,-20.169,-207.47,-20.169,-207.47,-207.47,-17.0711,-204.712,-204.712,-204.411 0|0:68:59,0,0,9:59:2048:0,0,9:0,0,308:-7.58225,-25.343,-191.835,-25.343,-191.835,-191.835,0,-166.835,-166.835,-164.125 dDocent_Contig_4367 187 . C T 33.6241 . AB=0.108696;ABP=186.547;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=2X;DP=623;DPB=623;DPRA=1.00966;EPP=37.7539;EPPR=1314.58;GTI=0;LEN=1;MEANALT=1;MQM=35.5625;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=638;QR=23400;RO=604;RPL=16;RPP=37.7539;RPPR=1314.58;RPR=0;RUN=1;SAF=0;SAP=37.7539;SAR=16;SRF=0;SRP=1314.58;SRR=604;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:56:56,0:56:2159:0:0:0,-16.8577,-194.495 0|0:165:164,0:164:6340:0:0:0,-49.3689,-569.99 0|0:117:116,0:116:4520:0:0:0,-34.9195,-406.681 0|0:76:75,0:75:2951:0:0:0,-22.5772,-265.595 0|1:138:123,15:123:4707:15:598:-4.8851,0,-382.043 0|0:71:70,1:70:2723:1:40:0,-17.9186,-241.753 dDocent_Contig_4368 27 . A T 2012.4 . AB=0.149502;ABP=966.56;AC=3;AF=0.25;AN=12;AO=157;CIGAR=1X;DP=1392;DPB=1392;DPRA=0;EPP=343.931;EPPR=2684.78;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998381;PAO=0;PQA=0;PQR=0;PRO=0;QA=6170;QR=48550;RO=1235;RPL=0;RPP=343.931;RPPR=2684.78;RPR=157;RUN=1;SAF=157;SAP=343.931;SAR=0;SRF=1235;SRP=2684.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:122:120,2:120:4720:2:82:0,-28.946,-416.954 0/0:169:159,10:159:6235:10:401:0,-14.4251,-524.499 0/0:198:188,10:188:7350:10:380:0,-25.0542,-626.656 0/1:180:154,26:154:6066:26:1029:-38.7222,0,-491.553 0/1:371:320,51:320:12647:51:1999:-68.429,0,-1025.7 0/1:352:294,58:294:11532:58:2279:-99.3109,0,-931.207 dDocent_Contig_4369 67 . A G 74.7181 . AB=0.146341;ABP=47.552;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=335;DPB=335;DPRA=0.730556;EPP=39.9253;EPPR=693.539;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.470588;PAIREDR=0.572327;PAO=0;PQA=0;PQR=0;PRO=0;QA=620;QR=11616;RO=318;RPL=13;RPP=13.3567;RPPR=36.4701;RPR=4;RUN=1;SAF=13;SAP=13.3567;SAR=4;SRF=194;SRP=36.4701;SRR=124;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:66:62,4:62:2222:4:154:0,-5.63439,-185.995 0/0:46:44,2:44:1567:2:75:0,-6.72728,-134.188 0/1:41:35,6:35:1302:6:233:-8.99469,0,-105.116 0/0:58:54,4:54:2018:4:123:0,-6.0915,-170.48 0/0:72:72,0:72:2642:0:0:0,-21.6742,-237.985 0/0:52:51,1:51:1865:1:35:0,-12.1549,-164.602 dDocent_Contig_4370 32 . T A 60.2208 . AB=0.107143;ABP=115.617;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=240;DPB=240;DPRA=1.07692;EPP=22.5536;EPPR=504.62;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.777778;PAIREDR=0.727273;PAO=0;PQA=0;PQR=0;PRO=0;QA=364;QR=9179;RO=231;RPL=0;RPP=22.5536;RPPR=504.62;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=231;SRP=504.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:37,0:37:1487:0:0:0,-11.1381,-134.077 0/0:36:36,0:36:1419:0:0:0,-10.8371,-127.951 0/1:36:31,5:31:1233:5:200:-7.54134,0,-100.403 0/1:48:44,4:44:1765:4:164:-0.700459,0,-144.616 0/0:30:30,0:30:1187:0:0:0,-9.0309,-107.106 0/0:53:53,0:53:2088:0:0:0,-15.9546,-188.097 dDocent_Contig_4371 32 . A T 10673 . AB=0.326938;ABP=328.452;AC=2;AF=0.166667;AN=12;AO=439;CIGAR=1X2M1X;DP=2799;DPB=2799;DPRA=1.37852;EPP=956.287;EPPR=5105.97;GTI=0;LEN=1;MEANALT=2.75;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999149;PAO=0;PQA=0;PQR=0;PRO=0;QA=17270;QR=92658;RO=2350;RPL=0;RPP=956.287;RPPR=5105.97;RPR=439;RUN=1;SAF=439;SAP=956.287;SAR=0;SRF=2350;SRP=5105.97;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:330:329,0:329:12940:0:0:0,-99.0389,-1163.68 0|0:516:494,20:494:19494:20:794:0,-83.3412,-1681.24 0|0:287:276,10:276:10873:10:395:0,-50.5841,-942.029 0|0:415:413,0:413:16288:0:0:0,-124.325,-1464.39 0|1:648:464,182:464:18342:182:7163:-449.545,0,-1454.55 0|1:603:374,227:374:14721:227:8918:-620.973,0,-1142.65 dDocent_Contig_4372 41 . A G 56.7988 . AB=0.130435;ABP=57.5803;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=187;DPB=187;DPRA=0.714286;EPP=22.5536;EPPR=389.532;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=367;QR=7054;RO=178;RPL=0;RPP=22.5536;RPPR=389.532;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=178;SRP=389.532;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:16,3:16:632:3:122:-5.65292,0,-51.4945 0/0:32:30,2:30:1198:2:82:0,-1.85328,-100.314 0/0:32:31,1:31:1207:1:41:0,-5.53839,-104.801 0/1:27:24,3:24:958:3:122:-3.24468,0,-78.3911 0/0:41:41,0:41:1644:0:0:0,-12.3422,-148.186 0/0:36:36,0:36:1415:0:0:0,-10.8371,-127.6 dDocent_Contig_4373 17 . C T 877.569 . AB=0.264286;ABP=70.5741;AC=2;AF=0.166667;AN=12;AO=49;CIGAR=1X;DP=1228;DPB=1228;DPRA=0.604317;EPP=109.412;EPPR=2563.18;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.996607;PAO=0;PQA=0;PQR=0;PRO=0;QA=1956;QR=46955;RO=1179;RPL=0;RPP=109.412;RPPR=2563.18;RPR=49;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=1179;SRP=2563.18;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:302:302,0:302:12088:0:0:0,-90.9111,-1087.04 0/0:324:321,3:321:12881:3:122:0,-86.1612,-1146.96 0/0:254:254,0:254:10071:0:0:0,-76.4616,-905.763 0/0:208:199,9:199:7863:9:362:0,-29.6701,-674.329 0/1:67:37,30:37:1450:30:1193:-87.4729,0,-110.577 0/1:73:66,7:66:2602:7:279:-3.5036,0,-212.339 dDocent_Contig_4374 14 . T C 1511.32 . AB=0.234043;ABP=176.266;AC=4;AF=0.333333;AN=12;AO=66;CIGAR=1X1M1X;DP=362;DPB=362;DPRA=1.7625;EPP=146.327;EPPR=571.936;GTI=0;LEN=1;MEANALT=2.5;MQM=56.4697;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.637405;PAO=0;PQA=0;PQR=0;PRO=0;QA=2605;QR=10403;RO=262;RPL=0;RPP=146.327;RPPR=571.936;RPR=66;RUN=1;SAF=66;SAP=146.327;SAR=0;SRF=262;SRP=571.936;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:54:42,10,2:42:1650:10,2:397,72:-20.0264,0,-132.723,-26.8032,-129.862,-161.9 0|1:72:55,13,4:55:2187:13,4:517,144:-25.9891,0,-176.182,-30.8095,-168.353,-209.666 0|1:61:31,22,7:31:1225:22,7:870,274:-61.8389,0,-94.181,-48.6473,-78.2803,-147.343 0|1:95:56,21,17:56:2238:21,17:821,677:-50.4995,0,-178.017,-11.6114,-128.596,-190.838 0|0:43:41,0,2:41:1633:0,2:0,82:0,-12.3422,-146.803,-5.16461,-140.034,-139.432 0|0:37:37,0,0:37:1470:0,0:0,0:0,-11.1381,-132.556,-11.1381,-132.556,-132.556 dDocent_Contig_4376 74 . C A 542.349 . AB=0.154728;ABP=364.389;AC=4;AF=0.333333;AN=12;AO=58;CIGAR=1X;DP=490;DPB=490;DPRA=0;EPP=128.956;EPPR=941.086;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.888889;PAO=0;PQA=0;PQR=0;PRO=0;QA=1971;QR=14748;RO=432;RPL=58;RPP=128.956;RPPR=941.086;RPR=0;RUN=1;SAF=58;SAP=128.956;SAR=0;SRF=432;SRP=941.086;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:70:67,3:67:2232:3:103:0,-11.4621,-191.535 0/0:71:70,1:70:2374:1:33:0,-18.074,-210.626 0/1:146:131,15:131:4486:15:510:-2.27437,0,-359.988 0/1:70:60,10:60:2081:10:336:-9.49375,0,-166.495 0/1:78:55,23:55:1893:23:782:-47.2152,0,-147.171 0/1:55:49,6:49:1682:6:207:-2.41153,0,-135.11 dDocent_Contig_4377 11 . G A 31768.4 . AB=0.26761;ABP=1661.22;AC=6;AF=0.5;AN=12;AO=946;CIGAR=1X7M1X;DP=3535;DPB=3312.33;DPRA=0;EPP=2057.22;EPPR=3401.36;GTI=0;LEN=1;MEANALT=5.33333;MQM=59.9968;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.959831;PAIREDR=0.998083;PAO=0;PQA=0;PQR=0;PRO=0;QA=37329;QR=62054;RO=1565;RPL=0;RPP=2057.22;RPPR=3401.36;RPR=946;RUN=1;SAF=946;SAP=2057.22;SAR=0;SRF=1565;SRP=3401.36;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:465:133,210,121:133:5280:210,121:8326,4806:-645.295,0,-371.447,-289.703,-39.0342,-687.941 0|1:635:237,218,170:237:9396:218,170:8609,6715:-637.029,0,-707.777,-155.849,-220.878,-878.076 0|1:338:148,84,104:148:5850:84,104:3305,4112:-293.813,-66.5147,-522.616,0,-209.539,-450.082 0|1:602:239,175,180:239:9520:175,180:6943,7014:-504.466,-4.88414,-736.137,0,-212.405,-729.744 0|1:740:375,202,160:375:14834:202,160:8040,6315:-549.122,0,-1159.96,-142.437,-701.195,-1315.04 0|1:755:433,108,211:433:17174:108,211:4274,8367:-558.337,-336.942,-1718.1,0,-1061.93,-1350.15 dDocent_Contig_4378 50 . A C 360.286 . AB=0.116147;ABP=454.781;AC=2;AF=0.166667;AN=12;AO=49;CIGAR=1X;DP=1385;DPB=1385;DPRA=1.08837;EPP=109.412;EPPR=2901.93;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=59.997;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.974532;PAO=0;PQA=0;PQR=0;PRO=0;QA=1896;QR=52653;RO=1335;RPL=49;RPP=109.412;RPPR=2790.11;RPR=0;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=1322;SRP=2790.11;SRR=13;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:199:197,2:197:7715:2:76:0,-52.6914,-686.782 0/0:266:260,5:260:10310:5:201:0,-61.6609,-908.797 0/0:352:351,1:351:13828:1:9:0,-105.063,-1242.63 0/0:215:215,0:215:8467:0:0:0,-64.7214,-761.582 0/1:211:186,25:186:7304:25:982:-25.1481,0,-593.52 0/1:142:126,16:126:5029:16:628:-14.1024,0,-409.745 dDocent_Contig_4379 80 . T G 5934 . AB=0.42069;ABP=34.6988;AC=6;AF=0.5;AN=12;AO=244;CIGAR=1X3M1X;DP=580;DPB=580;DPRA=0;EPP=532.85;EPPR=719.596;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8623;QR=11409;RO=330;RPL=244;RPP=532.85;RPPR=719.596;RPR=0;RUN=1;SAF=244;SAP=532.85;SAR=0;SRF=330;SRP=719.596;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:85:47,38:47:1586:38:1296:-91.3463,0,-117.443 0|1:139:46,90:46:1570:90:3182:-245.348,0,-100.332 0|1:135:81,54:81:2821:54:1934:-133.686,0,-213.49 0|1:145:108,34:108:3759:34:1223:-67.5335,0,-295.691 0|1:57:33,24:33:1147:24:845:-59.2057,0,-86.3774 0|1:19:15,4:15:526:4:143:-7.50172,0,-41.9512 dDocent_Contig_4380 16 . C A 55.6806 . AB=0.0942408;ABP=276.15;AC=2;AF=0.166667;AN=12;AO=32;CIGAR=1X;DP=555;DPB=555;DPRA=0;EPP=72.4974;EPPR=1138.69;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.965583;PAO=0;PQA=0;PQR=0;PRO=0;QA=1270;QR=20505;RO=523;RPL=0;RPP=72.4974;RPPR=1138.69;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=523;SRP=1138.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:64:62,2:62:2455:2:67:0,-12.9031,-214.74 0/0:109:104,5:104:4048:5:195:0,-14.8908,-346.402 0/1:56:51,5:51:2001:5:203:-1.79538,0,-163.42 0/0:98:95,3:95:3743:3:121:0,-18.221,-325.625 0/1:135:122,13:122:4823:13:526:-7.04795,0,-393.331 0/0:93:89,4:89:3435:4:158:0,-13.3964,-294.598 dDocent_Contig_4381 28 . A T 3126.85 . AB=0.166195;ABP=1027.95;AC=3;AF=0.25;AN=12;AO=210;CIGAR=1X;DP=2114;DPB=2114;DPRA=0.686373;EPP=459.02;EPPR=4135.32;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.984235;PAO=0;PQA=0;PQR=0;PRO=0;QA=8421;QR=75219;RO=1903;RPL=0;RPP=459.02;RPPR=4135.32;RPR=210;RUN=1;SAF=210;SAP=459.02;SAR=0;SRF=1903;SRP=4135.32;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:418:325,93:325:12812:93:3736:-210.417,0,-1026.38 0/0:477:476,0:476:18828:0:0:0,-143.29,-1692.92 0/1:295:270,25:270:10684:25:1008:-2.20692,0,-872.072 0/0:430:402,28:402:15828:28:1122:0,-28.1802,-1322.12 0/0:148:142,6:142:5573:6:230:0,-23.4922,-480.338 0/1:346:288,58:288:11494:58:2325:-105.24,0,-929.51 dDocent_Contig_4383 14 . C T 158.243 . AB=0.111111;ABP=215.815;AC=1;AF=0.0833333;AN=12;AO=30;CIGAR=1X;DP=1307;DPB=1307;DPRA=0.699083;EPP=68.1545;EPPR=2775.98;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.133333;PAIREDR=0.614722;PAO=0;PQA=0;PQR=0;PRO=0;QA=1218;QR=50920;RO=1277;RPL=0;RPP=68.1545;RPPR=2775.98;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=1277;SRP=2775.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:185:183,2:183:7264:2:80:0,-48.099,-645.797 0/0:279:272,7:272:10788:7:285:0,-57.963,-944.192 0/0:136:133,3:133:5330:3:122:0,-29.5676,-468.156 0/0:337:337,0:337:13433:0:0:0,-101.447,-1207.97 0/1:162:144,18:144:5768:18:731:-17.3472,0,-470.143 0/0:208:208,0:208:8337:0:0:0,-62.6142,-749.844 dDocent_Contig_4384 32 . C A 511.821 . AB=0.114625;ABP=655.739;AC=4;AF=0.333333;AN=12;AO=58;CIGAR=1X;DP=888;DPB=888;DPRA=0.662304;EPP=128.956;EPPR=1805.33;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.984337;PAO=0;PQA=0;PQR=0;PRO=0;QA=2309;QR=33430;RO=830;RPL=0;RPP=128.956;RPPR=1805.33;RPR=58;RUN=1;SAF=58;SAP=128.956;SAR=0;SRF=830;SRP=1805.33;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:145:133,12:133:5327:12:486:-0.442288,0,-435.621 0/1:160:143,17:143:5762:17:674:-12.8239,0,-470.192 0/1:68:57,11:57:2311:11:432:-18.7597,0,-187.67 0/1:133:115,18:115:4618:18:717:-24.8184,0,-375.495 0/0:227:227,0:227:9154:0:0:0,-68.3338,-823.252 0/0:155:155,0:155:6258:0:0:0,-46.6596,-562.933 dDocent_Contig_4385 10 . T A 79.9106 . AB=0.135135;ABP=88.5781;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=2X;DP=228;DPB=228;DPRA=1.55385;EPP=39.9253;EPPR=459.02;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.529412;PAIREDR=0.685714;PAO=0;PQA=0;PQR=0;PRO=0;QA=617;QR=8435;RO=210;RPL=0;RPP=39.9253;RPPR=459.02;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=210;SRP=459.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:44:42,2:42:1665:2:72:0,-6.40868,-143.24 0|0:26:26,0:26:1043:0:0:0,-7.82678,-94.161 0|1:30:27,3:27:1097:3:111:-1.32302,0,-89.9825 0|0:41:38,3:38:1536:3:110:0,-2.08122,-128.217 0|0:43:41,2:41:1656:2:74:0,-5.91841,-142.24 0|1:44:36,7:36:1438:7:250:-9.49897,0,-116.319 dDocent_Contig_4386 44 . A G 448.048 . AB=0.162651;ABP=167.1;AC=2;AF=0.166667;AN=12;AO=30;CIGAR=3M1X1M;DP=459;DPB=466;DPRA=1.03;EPP=68.1545;EPPR=904.192;GTI=0;LEN=1;MEANALT=2.25;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=0.966667;PAIREDR=0.973747;PAO=0;PQA=0;PQR=0;PRO=0;QA=1177;QR=16409;RO=419;RPL=0;RPP=68.1545;RPPR=904.192;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=419;SRP=912.857;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:61:54,2,5:54:2116:2,5:80,198:-0.0385483,-9.70287,-183.095,0,-167.4,-172.485 0|1:105:81,1,22:81:3145:1,22:40,860:-46.3269,-67.4148,-325.506,0,-255.106,-251.779 0|0:67:64,0,2:64:2521:0,2:0,79:0,-19.2659,-226.66,-12.762,-220.159,-219.557 0|0:76:71,4,1:71:2774:4,1:153,40:0,-8.8319,-235.66,-18.0746,-233.569,-245.822 0|0:86:86,0,0:86:3367:0,0:0,0:0,-25.8886,-303.119,-25.8886,-303.119,-303.119 0|0:64:63,0,0:63:2486:0,0:0,0:0,-18.9649,-223.825,-18.9649,-223.825,-223.825 dDocent_Contig_4387 14 . G T 2126.53 . AB=0.21663;ABP=321.751;AC=6;AF=0.5;AN=12;AO=99;CIGAR=1X;DP=457;DPB=457;DPRA=0;EPP=217.986;EPPR=780.397;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.616162;PAIREDR=0.606145;PAO=0;PQA=0;PQR=0;PRO=0;QA=3994;QR=14193;RO=358;RPL=0;RPP=217.986;RPPR=780.397;RPR=99;RUN=1;SAF=99;SAP=217.986;SAR=0;SRF=358;SRP=780.397;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:74:58,16:58:2262:16:642:-35.837,0,-181.475 0/1:95:74,21:74:2942:21:845:-47.7631,0,-236.279 0/1:69:55,14:55:2216:14:566:-30.5104,0,-178.833 0/1:87:64,23:64:2556:23:931:-57.9026,0,-203.977 0/1:74:64,10:64:2509:10:407:-14.7138,0,-203.667 0/1:58:43,15:43:1708:15:603:-37.1475,0,-136.475 dDocent_Contig_4388 8 . T C 1360.84 . AB=0.118617;ABP=1611.3;AC=4;AF=0.333333;AN=12;AO=201;CIGAR=1X;DP=2014;DPB=2014;DPRA=0;EPP=439.476;EPPR=3939.89;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.985075;PAIREDR=0.996139;PAO=0;PQA=0;PQR=0;PRO=0;QA=7764;QR=69492;RO=1813;RPL=0;RPP=439.476;RPPR=3939.89;RPR=201;RUN=1;SAF=201;SAP=439.476;SAR=0;SRF=1813;SRP=3939.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:310:278,32:278:10645:32:1241:-18.6629,0,-864.342 0/1:426:379,47:379:14477:47:1824:-36.1685,0,-1174.02 0/1:188:166,22:166:6334:22:836:-18.9642,0,-513.389 0/1:349:299,50:299:11506:50:1937:-69.5099,0,-930.022 0/0:403:371,32:371:14219:32:1233:0,-10.0524,-1167.78 0/0:338:320,18:320:12311:18:693:0,-39.0454,-1044.77 dDocent_Contig_4389 26 . A G 2456.3 . AB=0.201342;ABP=464.762;AC=2;AF=0.166667;AN=12;AO=130;CIGAR=1X;DP=1707;DPB=1707;DPRA=0.915423;EPP=285.302;EPPR=3425.25;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.130769;PAIREDR=0.950508;PAO=0;PQA=0;PQR=0;PRO=0;QA=5123;QR=62345;RO=1576;RPL=0;RPP=285.302;RPPR=3425.25;RPR=130;RUN=1;SAF=130;SAP=285.302;SAR=0;SRF=1576;SRP=3425.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:265:265,0:265:10463:0:0:0,-79.7729,-941.019 0/0:338:338,0:338:13362:0:0:0,-101.748,-1201.64 0/0:212:205,7:205:8191:7:249:0,-41.075,-713.992 0/0:296:292,3:292:11566:3:119:0,-78.1081,-1029.08 0/1:324:243,81:243:9538:81:3202:-190.719,0,-760.359 0/1:272:233,39:233:9225:39:1553:-58.1328,0,-747.846 dDocent_Contig_4390 20 . C T 15348.7 . AB=0.249333;ABP=1434.56;AC=4;AF=0.333333;AN=12;AO=703;CIGAR=1X;DP=4455;DPB=4455;DPRA=0;EPP=1529.56;EPPR=8135.17;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=0.998578;PAIREDR=0.999466;PAO=0;PQA=0;PQR=0;PRO=0;QA=27852;QR=149354;RO=3745;RPL=0;RPP=1529.56;RPPR=8135.17;RPR=703;RUN=1;SAF=703;SAP=1529.56;SAR=0;SRF=3745;SRP=8135.17;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:623:499,123:499:19847:123:4866:-250.508,0,-1597.23 0/1:720:513,207:513:20521:207:8118:-513.461,0,-1628.39 0/1:576:375,200:375:14908:200:7991:-545.235,0,-1167.05 0/1:704:577,124:577:23064:124:4937:-232.887,0,-1862.42 0/0:989:945,44:945:37659:44:1743:0,-140.634,-3228.71 0/0:843:836,5:836:33355:5:197:0,-235.467,-2980.7 dDocent_Contig_4391 29 . C T 474.452 . AB=0.168142;ABP=219.197;AC=3;AF=0.25;AN=12;AO=48;CIGAR=1X;DP=370;DPB=370;DPRA=0;EPP=107.241;EPPR=702.224;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.645833;PAIREDR=0.5;PAO=0;PQA=0;PQR=0;PRO=0;QA=1683;QR=11336;RO=322;RPL=0;RPP=107.241;RPPR=702.224;RPR=48;RUN=1;SAF=0;SAP=107.241;SAR=48;SRF=0;SRP=702.224;SRR=322;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:59:44,15:44:1553:15:521:-29.4572,0,-122.301 0/1:99:87,12:87:3059:12:429:-9.14763,0,-245.742 0/1:68:57,11:57:2016:11:380:-14.0622,0,-161.245 0/0:91:83,8:83:2910:8:281:0,-1.76322,-236.508 0/0:22:21,1:21:744:1:36:0,-3.02438,-63.686 0/0:31:30,1:30:1054:1:36:0,-5.73365,-91.5727 dDocent_Contig_4392 7 . A G 43.3199 . AB=0.147059;ABP=39.7976;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=227;DPB=227;DPRA=1.69167;EPP=29.068;EPPR=469.877;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.95814;PAO=0;PQA=0;PQR=0;PRO=0;QA=366;QR=8201;RO=215;RPL=0;RPP=29.068;RPPR=469.877;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=215;SRP=469.877;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:36,1:36:1358:1:38:0,-7.34084,-118.702 0/0:24:24,0:24:922:0:0:0,-7.22472,-83.2969 0/0:56:54,2:54:2088:2:55:0,-11.6353,-182.926 0/0:36:35,1:35:1329:1:27:0,-8.1373,-117.199 0/1:34:29,5:29:1107:5:175:-5.85485,0,-89.698 0/0:40:37,3:37:1397:3:71:0,-5.41781,-119.388 dDocent_Contig_4393 17 . C A 1220.82 . AB=0.15587;ABP=511.152;AC=3;AF=0.25;AN=12;AO=104;CIGAR=1X;DP=954;DPB=954;DPRA=0;EPP=228.843;EPPR=1848.76;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4128;QR=34230;RO=850;RPL=0;RPP=228.843;RPPR=1848.76;RPR=104;RUN=1;SAF=104;SAP=228.843;SAR=0;SRF=850;SRP=1848.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:136:125,11:125:5058:11:446:0,-0.444474,-414.571 0/0:176:167,9:167:6717:9:358:0,-20.3994,-571.621 0/1:228:208,20:208:8372:20:801:-3.77365,0,-684.331 0/0:148:141,7:141:5673:7:267:0,-20.1655,-485.959 0/1:146:112,34:112:4492:34:1361:-78.802,0,-360.249 0/1:120:97,23:97:3918:23:895:-44.7272,0,-316.474 dDocent_Contig_4394 10 . T C 45158 . AB=0.0902527;ABP=406.959;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=3M1X2M1X;DP=1593;DPB=1612.86;DPRA=0.802899;EPP=57.2971;EPPR=226.672;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=989;QR=4016;RO=103;RPL=0;RPP=57.2971;RPPR=226.672;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=103;SRP=226.672;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:277:8,2,25,240:8:309:2,25,240:64,989,9569:-841.601,-838.854,-863.629,-762.619,-782.84,-780.47,-56.0266,-76.2512,0,-9.15579 0|0:276:7,24,0,243:7:274:24,0,243:916,0,9688:-848.302,-775.26,-790.565,-850.409,-797.79,-872.939,-52.6329,0,-75.1672,-2.01693 0|0:125:12,6,0,107:12:471:6,0,107:220,0,4260:-347.161,-332.794,-369.725,-350.774,-371.531,-389.51,0,-20.7818,-38.7542,-6.54399 0|0:193:9,35,0,149:9:356:35,0,149:1232,0,5938:-557.214,-459.651,-478.414,-559.923,-488.95,-589.222,-70.9382,0,-100.246,-55.3925 0|0:345:17,24,0,304:17:665:24,0,304:892,0,12164:-1033.71,-965.833,-1013.28,-1038.83,-1020.51,-1093.51,-36.8289,-18.5259,-91.5131,0 0|0:377:50,47,0,278:50:1941:47,0,278:1754,0,11080:-896.97,-768.425,-913.751,-912.021,-927.9,-1071.5,0,-15.8914,-159.486,-75.7996 dDocent_Contig_4395 38 . T C 12367.4 . AB=0.777336;ABP=339.053;AC=5;AF=0.416667;AN=12;AO=391;CIGAR=1X;DP=531;DPB=531;DPRA=3.59286;EPP=852.056;EPPR=307.016;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0920716;PAIREDR=0.878571;PAO=0;PQA=0;PQR=0;PRO=0;QA=15522;QR=5616;RO=140;RPL=0;RPP=852.056;RPPR=307.016;RPR=391;RUN=1;SAF=391;SAP=852.056;SAR=0;SRF=140;SRP=307.016;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:19,3:19:744:3:122:-4.74983,0,-60.6592 0/1:42:26,16:26:1043:16:645:-45.7409,0,-81.5105 0/1:35:11,24:11:442:24:972:-77.2413,0,-29.5993 0/0:28:28,0:28:1135:0:0:0,-8.42884,-102.429 0/1:185:33,152:33:1335:152:6000:-484.09,0,-64.7182 0/1:219:23,196:23:917:196:7783:-634.137,0,-16.9088 dDocent_Contig_4396 78 . G C 914.309 . AB=0.296053;ABP=57.9257;AC=4;AF=0.333333;AN=12;AO=50;CIGAR=1X;DP=513;DPB=513;DPRA=0;EPP=111.584;EPPR=1001.89;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.72;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1772;QR=16622;RO=460;RPL=50;RPP=111.584;RPPR=1001.89;RPR=0;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=460;SRP=1001.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:10:5,5:5:178:5:175:-13.083,0,-13.3583 0/1:53:30,23:30:1068:23:814:-57.627,0,-80.4782 0/1:32:23,9:23:839:9:308:-18.4156,0,-66.2003 0/1:57:47,8:47:1705:8:290:-9.52718,0,-136.81 0/0:221:218,3:218:7894:3:111:0,-56.1737,-700.084 0/0:140:137,2:137:4938:2:74:0,-34.9939,-437.611 dDocent_Contig_4397 28 . C A 7942.79 . AB=0.357494;ABP=146.594;AC=2;AF=0.166667;AN=12;AO=306;CIGAR=1X;DP=2135;DPB=2135;DPRA=0.891786;EPP=667.481;EPPR=3972.46;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995624;PAO=0;PQA=0;PQR=0;PRO=0;QA=12192;QR=73110;RO=1828;RPL=0;RPP=667.481;RPPR=3972.46;RPR=306;RUN=1;SAF=306;SAP=667.481;SAR=0;SRF=1828;SRP=3972.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:222:208,14:208:8321:14:564:0,-15.7277,-697.315 0/0:332:331,1:331:13182:1:40:0,-95.9463,-1181.41 0/0:356:356,0:356:14288:0:0:0,-107.167,-1284.8 0/0:411:410,0:410:16346:0:0:0,-123.422,-1469.42 0/1:435:271,164:271:10854:164:6559:-459.094,0,-845.173 0/1:379:252,127:252:10119:127:5029:-338.407,0,-795.952 dDocent_Contig_4398 171 . A G 14319.8 . AB=0.571184;ABP=28.6694;AC=7;AF=0.583333;AN=12;AO=461;CIGAR=1X;DP=721;DPB=721;DPRA=0;EPP=1004.06;EPPR=567.593;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.991323;PAIREDR=0.980769;PAO=0;PQA=0;PQR=0;PRO=0;QA=18364;QR=10331;RO=260;RPL=461;RPP=1004.06;RPPR=567.593;RPR=0;RUN=1;SAF=0;SAP=1004.06;SAR=461;SRF=0;SRP=567.593;SRR=260;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:138:44,94:44:1740:94:3760:-296.869,0,-115.267 1/1:138:10,128:10:402:128:5102:-422.514,-5.00256,0 0/1:103:20,83:20:807:83:3266:-262.993,0,-41.9386 0/1:153:56,97:56:2235:97:3883:-303.408,0,-155.247 0/1:116:88,28:88:3462:28:1120:-66.1625,0,-276.704 0/1:73:42,31:42:1685:31:1233:-89.2568,0,-129.896 dDocent_Contig_4399 97 . G A 129.887 . AB=0.134146;ABP=193.676;AC=3;AF=0.25;AN=12;AO=32;CIGAR=1X;DP=357;DPB=357;DPRA=0;EPP=72.4974;EPPR=708.739;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.34375;PAIREDR=0.553846;PAO=0;PQA=0;PQR=0;PRO=0;QA=1062;QR=10655;RO=325;RPL=32;RPP=72.4974;RPPR=708.739;RPR=0;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=325;SRP=708.739;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:53:52,1:52:1738:1:35:0,-12.456,-153.206 0/1:64:54,10:54:1757:10:326:-10.3916,0,-139.144 0/1:51:46,5:46:1518:5:174:-0.649424,0,-121.556 0/0:89:83,6:83:2748:6:205:0,-8.0064,-228.788 0/0:51:48,3:48:1562:3:97:0,-6.30155,-131.812 0/1:49:42,7:42:1332:7:225:-5.8157,0,-105.413 dDocent_Contig_4400 96 . C T 129.641 . AB=0.136364;ABP=154.619;AC=1;AF=0.0833333;AN=12;AO=35;CIGAR=1X;DP=1561;DPB=1561;DPRA=0.906306;EPP=79.0118;EPPR=3312.33;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992782;PAO=0;PQA=0;PQR=0;PRO=0;QA=1140;QR=52709;RO=1524;RPL=35;RPP=79.0118;RPPR=3312.33;RPR=0;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=1524;SRP=3312.33;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:249:249,0:249:8488:0:0:0,-74.9565,-763.986 0/0:265:252,13:252:8615:13:422:0,-41.4796,-737.119 0/1:132:114,18:114:3991:18:599:-14.487,0,-319.649 0/0:288:285,3:285:9898:3:106:0,-76.8075,-880.907 0/0:321:318,1:318:11051:1:13:0,-94.8386,-993.26 0/0:306:306,0:306:10666:0:0:0,-92.1152,-959.888 dDocent_Contig_4401 33 . C T 274.739 . AB=0.224138;ABP=41.348;AC=1;AF=0.0833333;AN=12;AO=21;CIGAR=1X;DP=445;DPB=445;DPRA=0.859524;EPP=48.6112;EPPR=923.715;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.904762;PAIREDR=0.964623;PAO=0;PQA=0;PQR=0;PRO=0;QA=830;QR=16954;RO=424;RPL=0;RPP=48.6112;RPPR=923.715;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=424;SRP=923.715;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:58:45,13:45:1777:13:509:-28.6958,0,-142.674 0/0:91:88,3:88:3526:3:122:0,-16.0212,-305.999 0/0:62:60,2:60:2423:2:80:0,-11.0721,-210.621 0/0:76:74,2:74:2942:2:79:0,-15.3806,-257.378 0/0:84:84,0:84:3343:0:0:0,-25.2865,-300.917 0/0:74:73,1:73:2943:1:40:0,-18.2805,-260.952 dDocent_Contig_4402 168 . N G 566.909 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=17;CIGAR=1X;DP=17;DPB=17;DPRA=0;EPP=3.13803;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=613;QR=0;RO=0;RPL=17;RPP=39.9253;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=3.13803;SAR=8;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:5:0,5:0:0:5:185:-17.0067,-1.50515,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:71:-6.73943,-0.60206,0 1/1:10:0,10:0:0:10:357:-32.4673,-3.0103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_4403 97 . T A 3900.91 . AB=0.837838;ABP=39.6906;AC=10;AF=0.833333;AN=12;AO=130;CIGAR=2X;DP=144;DPB=146.5;DPRA=0;EPP=285.302;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=0;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=71;PRO=2.5;QA=4320;QR=0;RO=0;RPL=130;RPP=285.302;RPPR=0;RPR=0;RUN=1;SAF=130;SAP=285.302;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:30:0,30,0:0:0:30,0:957,0:-86.3668,-9.0309,0,-86.3668,-9.0309,-86.3668 1|1:20:0,18,2:0:0:18,2:604,41:-54.435,-5.41854,0,-51.3614,-2.15462,-50.7593 1|0:27:0,24,3:0:0:24,3:810,101:-74.1701,-8.52068,-1.29596,-65.9861,0,-65.083 1|0:10:0,7,3:0:0:7,3:244,51:-23.8259,-3.85672,-1.74951,-20.1927,0,-19.2896 1|1:18:0,15,2:0:0:15,2:495,40:-44.6603,-4.51545,0,-41.6763,-1.47843,-41.0742 1|1:39:0,36,3:0:0:36,3:1210,94:-108.848,-10.8371,0,-101.295,-3.04885,-100.392 dDocent_Contig_4404 10 . T A 9960.03 . AB=0.169852;ABP=3074.24;AC=4;AF=0.333333;AN=12;AO=551;CIGAR=1X3M2I1X;DP=3743;DPB=3963.8;DPRA=1.3002;EPP=1199.49;EPPR=6801.89;GTI=0;LEN=1;MEANALT=2.6;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=20687;QR=124305;RO=3131;RPL=0;RPP=1199.49;RPPR=6801.89;RPR=551;RUN=1;SAF=551;SAP=1199.49;SAR=0;SRF=3131;SRP=6801.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:700:508,190,1:508:20151:190,1:7155,40:-433.372,0,-1601.51,-583,-1655.41,-2241.42 0|1:760:583,175,1:583:23094:175,1:6547,40:-360.78,0,-1848.17,-532.985,-1897.56,-2433.42 0|1:578:483,93,0:483:19190:93,0:3502,0:-141.71,0,-1551.97,-287.108,-1579.97,-1866.94 0|1:569:500,68,0:500:19861:68,0:2549,0:-58.2383,0,-1614.55,-208.753,-1635.02,-1843.8 0|0:499:499,0,0:499:19841:0,0:0,0:0,-150.214,-1784.12,-150.214,-1784.12,-1784.12 0|0:637:558,25,54:558:22168:25,54:934,2173:-11.1241,-102.628,-1920.03,0,-1748.48,-1808.7 dDocent_Contig_4405 105 . N G 64.5896 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=2X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=68;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:68:-6.45788,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_4406 20 . T A 14270.9 . AB=0.229331;ABP=1773.31;AC=6;AF=0.5;AN=12;AO=638;CIGAR=1X;DP=2782;DPB=2782;DPRA=0;EPP=1388.41;EPPR=4658.65;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9949;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999067;PAO=0;PQA=0;PQR=0;PRO=0;QA=25288;QR=85742;RO=2144;RPL=0;RPP=1388.41;RPPR=4658.65;RPR=638;RUN=1;SAF=638;SAP=1388.41;SAR=0;SRF=2144;SRP=4658.65;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:409:286,123:286:11427:123:4872:-315.279,0,-904.488 0/1:435:312,123:312:12431:123:4900:-309.95,0,-986.94 0/1:280:202,78:202:8130:78:3063:-191.485,0,-646.936 0/1:381:304,77:304:12208:77:3039:-158.909,0,-983.121 0/1:587:509,78:509:20304:78:3086:-101.12,0,-1648.92 0/1:690:531,159:531:21242:159:6328:-361.57,0,-1702.23 dDocent_Contig_4407 16 . C T 134.569 . AB=0.0914454;ABP=985.989;AC=3;AF=0.25;AN=12;AO=100;CIGAR=1X;DP=1367;DPB=1367;DPRA=0;EPP=211.559;EPPR=2401.55;GTI=0;LEN=1;MEANALT=1;MQM=59.79;MQMR=57.6496;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.164957;PAO=0;PQA=0;PQR=0;PRO=0;QA=3979;QR=50601;RO=1267;RPL=0;RPP=220.158;RPPR=2754.27;RPR=100;RUN=1;SAF=99;SAP=211.559;SAR=1;SRF=1225;SRP=2401.55;SRR=42;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:223:207,16:207:8234:16:636:0,-9.57577,-659.458 0/1:238:217,21:217:8587:21:837:-3.99401,0,-669.436 0/0:188:182,6:182:7302:6:241:0,-34.5272,-610.458 0/1:179:161,18:161:6430:18:715:-10.7759,0,-512.369 0/1:261:238,23:238:9580:23:913:-3.9072,0,-774.763 0/0:278:262,16:262:10468:16:637:0,-26.0296,-874.023 dDocent_Contig_4408 26 . A G 42.3902 . AB=0.109375;ABP=87.8334;AC=1;AF=0.0833333;AN=12;AO=23;CIGAR=1X;DP=483;DPB=483;DPRA=1.2;EPP=52.9542;EPPR=1001.89;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=913;QR=17710;RO=460;RPL=0;RPP=52.9542;RPPR=1001.89;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=460;SRP=1001.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:66:63,3:63:2421:3:120:0,-8.68029,-206.899 0/0:69:69,0:69:2671:0:0:0,-20.7711,-240.558 0/0:73:71,2:71:2731:2:81:0,-14.2895,-238.265 0/0:140:130,10:130:4979:10:398:0,-5.96448,-411.92 0/1:64:57,7:57:2194:7:274:-5.76188,0,-178.398 0/0:71:70,1:70:2714:1:40:0,-17.3774,-240.428 dDocent_Contig_4409 115 . C A 50.3285 . AB=0.118519;ABP=173.656;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=331;DPB=331;DPRA=1.37755;EPP=37.7539;EPPR=682.681;GTI=0;LEN=1;MEANALT=2;MQM=59.25;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.964856;PAO=0;PQA=0;PQR=0;PRO=0;QA=515;QR=9666;RO=313;RPL=0;RPP=37.7539;RPPR=682.681;RPR=16;RUN=1;SAF=0;SAP=37.7539;SAR=16;SRF=0;SRP=682.681;SRR=313;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:47:47,0:47:1469:0:0:0,-14.1484,-132.483 0/1:63:56,6:56:1711:6:207:-0.192155,0,-135.512 0/0:26:26,0:26:794:0:0:0,-7.82678,-71.7428 0/0:63:63,0:63:1900:0:0:0,-18.9649,-171.248 0/1:72:61,10:61:1837:10:308:-6.5546,0,-144.139 0/0:60:60,0:60:1955:0:0:0,-18.0618,-176.222 dDocent_Contig_4410 9 . T G 4044.2 . AB=0.306695;ABP=153.283;AC=6;AF=0.5;AN=12;AO=142;CIGAR=1X4M;DP=463;DPB=463;DPRA=0;EPP=311.359;EPPR=543.707;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=5.55112e-17;PAIRED=0.901408;PAIREDR=0.855422;PAO=0;PQA=0;PQR=0;PRO=0;QA=5415;QR=9756;RO=249;RPL=0;RPP=311.359;RPPR=543.707;RPR=142;RUN=1;SAF=142;SAP=311.359;SAR=0;SRF=249;SRP=543.707;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:43:32,4,7:32:1242:4,7:157,258:-11.4497,-8.1614,-109.019,0,-89.1287,-99.9345 0|1:73:37,13,21:37:1457:13,21:486,805:-54.9359,-26.2821,-142.24,0,-80.0877,-113.557 0|1:85:43,24,18:43:1692:24,18:932,690:-63.6391,0,-131.968,-19.9545,-82.5644,-153.725 0|1:104:68,22,14:68:2657:22,14:851,530:-49.435,0,-211.821,-26.4604,-174.998,-240.682 0|1:61:30,1,30:30:1177:1,30:39,1135:-83.9972,-89.8218,-186.325,0,-93.5937,-87.7686 0|1:97:39,6,52:39:1531:6,52:233,1997:-152.185,-144.779,-268.889,0,-106.771,-110.263 dDocent_Contig_4411 175 . N G 185.9 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0.2;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=189;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:78:-7.4033,-0.60206,0 1/1:2:0,2:0:0:2:77:-7.30914,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_4413 22 . T C 4303.07 . AB=0.154755;ABP=1755.79;AC=2;AF=0.166667;AN=12;AO=289;CIGAR=1X;DP=4027;DPB=4027;DPRA=1.57011;EPP=630.566;EPPR=8119.97;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11559;QR=148719;RO=3738;RPL=0;RPP=630.566;RPPR=8119.97;RPR=289;RUN=1;SAF=289;SAP=630.566;SAR=0;SRF=3738;SRP=8119.97;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:537:536,1:536:21274:1:40:0,-157.657,-1908.95 0/0:732:727,5:727:28918:5:205:0,-201.519,-2581.27 0/0:455:455,0:455:18116:0:0:0,-136.969,-1628.98 0/0:610:589,21:589:23400:21:831:0,-108.528,-2028.93 0/1:815:641,174:641:25553:174:6951:-379.925,0,-2052.24 0/1:878:790,88:790:31458:88:3532:-53.6039,0,-2564.1 dDocent_Contig_4414 12 . G T 4265.21 . AB=0.244032;ABP=217.56;AC=7;AF=0.583334;AN=12;AO=92;CIGAR=3X1M2I3X3M;DP=477;DPB=521;DPRA=0;EPP=202.786;EPPR=545.878;GTI=0;LEN=1;MEANALT=3.2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.902174;PAIREDR=0.992;PAO=0;PQA=0;PQR=0;PRO=0;QA=3614;QR=9595;RO=250;RPL=0;RPP=202.786;RPPR=545.878;RPR=92;RUN=1;SAF=92;SAP=202.786;SAR=0;SRF=250;SRP=545.878;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:80:44,19,15:44:1684:19,15:745,599:-48.0186,0,-132.459,-11.9245,-88.8385,-145.593 0|1:104:70,19,12:70:2703:19,12:750,470:-40.6437,0,-216.263,-23.0687,-183.334,-241.437 0|1:58:35,19,4:35:1348:19,4:731,148:-49.3928,0,-104.973,-47.8274,-98.5898,-157.303 0|1:100:67,33,0:67:2564:33,0:1290,0:-86.2221,0,-200.848,-106.391,-210.782,-316.785 0|1:69:19,13,35:19:721:13,35:506,1369:-106.838,-70.9732,-126.174,0,-17.5248,-48.5778 1|1:66:15,23,26:15:575:23,26:897,1028:-106.628,-37.4179,-77.6825,-26.5417,0,-65.9049 dDocent_Contig_4415 18 . A G 2747.27 . AB=0.283887;ABP=161.628;AC=4;AF=0.333333;AN=12;AO=114;CIGAR=1X;DP=624;DPB=624;DPRA=1.12766;EPP=250.558;EPPR=1110.46;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990196;PAO=0;PQA=0;PQR=0;PRO=0;QA=4551;QR=20441;RO=510;RPL=0;RPP=250.558;RPPR=1110.46;RPR=114;RUN=1;SAF=114;SAP=250.558;SAR=0;SRF=510;SRP=1110.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:108:74,34:74:2975:34:1325:-86.9957,0,-235.324 0/1:110:73,37:73:2919:37:1491:-101.32,0,-229.697 0/1:61:44,17:44:1781:17:690:-44.066,0,-142.136 0/1:112:89,23:89:3538:23:922:-49.5672,0,-284.736 0/0:139:136,3:136:5461:3:123:0,-30.3784,-479.847 0/0:94:94,0:94:3767:0:0:0,-28.2968,-339.025 dDocent_Contig_4417 16 . G A 6966.93 . AB=0.148185;ABP=3260.52;AC=4;AF=0.333333;AN=12;AO=523;CIGAR=1X;DP=4589;DPB=4589;DPRA=0;EPP=1138.69;EPPR=8767.07;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=20892;QR=161575;RO=4036;RPL=0;RPP=1138.69;RPPR=8767.07;RPR=523;RUN=1;SAF=523;SAP=1138.69;SAR=0;SRF=4036;SRP=8767.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:621:498,123:498:19966:123:4938:-257.366,0,-1608.28 0/1:777:701,74:701:27950:74:2891:-26.5972,0,-2279.28 0/0:677:622,54:622:24950:54:2184:0,-7.18192,-2046.52 0/1:738:631,92:631:25253:92:3669:-112.188,0,-2052.43 0/0:882:850,20:850:34053:20:797:0,-190.252,-2989.52 0/1:894:734,160:734:29403:160:6413:-307.764,0,-2374.4 dDocent_Contig_4418 21 . T G 183.804 . AB=0.0930233;ABP=1116.52;AC=3;AF=0.25;AN=12;AO=86;CIGAR=1X;DP=1356;DPB=1356;DPRA=2.04132;EPP=189.757;EPPR=2760.78;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.976744;PAIREDR=0.988189;PAO=0;PQA=0;PQR=0;PRO=0;QA=3377;QR=50746;RO=1270;RPL=0;RPP=189.757;RPPR=2760.78;RPR=86;RUN=1;SAF=86;SAP=189.757;SAR=0;SRF=1270;SRP=2760.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:296:283,13:283:11274:13:505:0,-43.3095,-968.089 0/1:265:237,28:237:9440:28:1089:-18.5139,0,-769.223 0/1:167:153,14:153:6120:14:567:-1.10027,0,-500.294 0/1:342:312,30:312:12494:30:1175:-3.07344,0,-1020.59 0/0:121:121,0:121:4832:0:0:0,-36.4246,-434.784 0/0:165:164,1:164:6586:1:41:0,-45.5754,-588.343 dDocent_Contig_4419 16 . G A 181.373 . AB=0.149425;ABP=95.8844;AC=2;AF=0.166667;AN=12;AO=19;CIGAR=1X;DP=309;DPB=309;DPRA=0.756098;EPP=44.2683;EPPR=632.737;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.975862;PAO=0;PQA=0;PQR=0;PRO=0;QA=762;QR=11708;RO=290;RPL=0;RPP=44.2683;RPPR=632.737;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=290;SRP=632.737;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:48:40,8:40:1618:8:315:-14.2643,0,-131.397 0/0:54:50,4:50:2017:4:161:0,-1.38014,-166.835 0/1:39:34,5:34:1373:5:205:-7.09484,0,-112.081 0/0:45:43,2:43:1741:2:81:0,-5.86062,-149.216 0/0:73:73,0:73:2935:0:0:0,-21.9752,-264.236 0/0:50:50,0:50:2024:0:0:0,-15.0515,-182.341 dDocent_Contig_4420 42 . C A 2149.71 . AB=0.323077;ABP=73.7001;AC=6;AF=0.5;AN=12;AO=84;CIGAR=1X;DP=260;DPB=260;DPRA=0;EPP=185.414;EPPR=385.189;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.607143;PAIREDR=0.630682;PAO=0;PQA=0;PQR=0;PRO=0;QA=3360;QR=7075;RO=176;RPL=0;RPP=185.414;RPPR=385.189;RPR=84;RUN=1;SAF=84;SAP=185.414;SAR=0;SRF=176;SRP=385.189;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:20,12:20:806:12:482:-34.0988,0,-63.2232 0/1:52:41,11:41:1637:11:441:-24.3923,0,-131.905 0/1:36:31,5:31:1233:5:203:-7.81598,0,-100.407 0/1:44:26,18:26:1055:18:712:-51.1624,0,-81.9922 0/1:38:25,13:25:1014:13:517:-35.4359,0,-80.1129 0/1:58:33,25:33:1330:25:1005:-73.2873,0,-102.498 dDocent_Contig_4421 16 . G T 1038.79 . AB=0.145833;ABP=525.973;AC=2;AF=0.166667;AN=12;AO=107;CIGAR=1X;DP=2011;DPB=2011;DPRA=0.668683;EPP=235.358;EPPR=4133.15;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.983701;PAO=0;PQA=0;PQR=0;PRO=0;QA=4289;QR=75901;RO=1902;RPL=0;RPP=235.358;RPPR=4133.15;RPR=107;RUN=1;SAF=107;SAP=235.358;SAR=0;SRF=1902;SRP=4133.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:315:260,54:260:10366:54:2156:-99.2924,0,-837.323 0/0:319:293,26:293:11704:26:1054:0,-0.88291,-957.402 0/1:165:149,16:149:5954:16:635:-7.80825,0,-485.956 0/0:352:349,2:349:13905:2:82:0,-98.2913,-1242.6 0/0:397:388,9:388:15466:9:362:0,-86.5673,-1357.79 0/0:463:463,0:463:18506:0:0:0,-139.377,-1663.98 dDocent_Contig_4422 14 . C T 29649.4 . AB=0.0151815;ABP=3096.05;AC=0;AF=0;AN=12;AO=23;CIGAR=1X3M1X;DP=1795;DPB=1795;DPRA=0;EPP=24.253;EPPR=1564.3;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.826087;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=904;QR=28603;RO=719;RPL=0;RPP=52.9542;RPPR=1564.3;RPR=23;RUN=1;SAF=19;SAP=24.253;SAR=4;SRF=719;SRP=1564.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:51:18,0,33,0:18:714:0,33,0:0,1311,0:-102.899,-108.318,-167.091,0,-59.1692,-49.2352,-108.318,-167.091,-59.1692,-167.091 0|0:74:16,4,49,5:16:642:4,49,5:160,1958,205:-156.445,-148.081,-199.775,0,-39.7151,-38.144,-144.34,-184.058,-35.9723,-195.732 0|0:61:24,0,37,0:24:954:0,37,0:0,1471,0:-114.272,-121.497,-200.039,0,-78.9388,-67.8007,-121.497,-200.039,-78.9388,-200.039 0|0:168:45,0,118,5:45:1789:0,118,5:0,4709,193:-374.254,-387.801,-535.089,0,-147.299,-111.777,-371.954,-519.242,-131.452,-517.737 0|0:693:265,16,342,69:265:10565:16,342,69:623,13671,2804:-1046.21,-1074.78,-1939.99,0,-818.825,-767.071,-894.707,-1713.54,-638.75,-1743.96 0|0:748:351,3,389,2:351:13939:3,389,2:121,15628,82:-1182.09,-1277.77,-2424.32,0,-1137.48,-1030.35,-1280.98,-2418.46,-1140.68,-2427.83 dDocent_Contig_4423 13 . G A 866.139 . AB=0.0632184;ABP=579.674;AC=5;AF=0.416667;AN=12;AO=23;CIGAR=9M1X;DP=491;DPB=498.2;DPRA=0;EPP=52.9542;EPPR=858.57;GTI=0;LEN=1;MEANALT=2.4;MQM=60;MQMR=59.9213;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.989848;PAO=0;PQA=0;PQR=0;PRO=0;QA=909;QR=15144;RO=394;RPL=0;RPP=52.9542;RPPR=858.57;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=394;SRP=858.57;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:63:61,1,1:61:2329:1,1:35,38:0,-15.53,-206.31,-15.2314,-203.495,-206.041 0|1:82:67,7,8:67:2581:7,8:255,317:-5.93946,-5.5755,-215.388,0,-191.405,-209.544 0|1:111:93,15,2:93:3586:15,2:511,74:-12.4993,0,-290.005,-34.4385,-288.468,-328.362 0|1:60:50,4,6:50:1925:4,6:133,237:-4.4989,-9.63275,-166.476,0,-148.18,-156.32 0|1:95:61,27,6:61:2346:27,6:879,243:-47.2609,0,-183.711,-45.5678,-171.799,-235.649 0|1:80:62,18,0:62:2377:18,0:591,0:-25.6369,0,-190.06,-44.3007,-195.479,-239.457 dDocent_Contig_4424 43 . T C 576.55 . AB=0.182927;ABP=146.222;AC=1;AF=0.0833333;AN=12;AO=73;CIGAR=1X;DP=1652;DPB=1652;DPRA=0;EPP=161.528;EPPR=3427.42;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999366;PAO=0;PQA=0;PQR=0;PRO=0;QA=2910;QR=61441;RO=1577;RPL=0;RPP=161.528;RPPR=3427.42;RPR=73;RUN=1;SAF=73;SAP=161.528;SAR=0;SRF=1577;SRP=3427.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:206:199,6:199:7739:6:242:0,-39.6889,-674.118 0/0:301:288,13:288:11268:13:502:0,-45.092,-967.989 0/1:164:134,30:134:5167:30:1203:-59.1779,0,-415.611 0/0:248:233,15:233:9115:15:600:0,-20.3171,-765.571 0/0:414:410,4:410:15914:4:164:0,-109.477,-1416.11 0/0:319:313,5:313:12238:5:199:0,-77.732,-1082.46 dDocent_Contig_4425 19 . G A 1108.96 . AB=0.213992;ABP=175.665;AC=3;AF=0.25;AN=12;AO=59;CIGAR=2X;DP=412;DPB=412;DPRA=0;EPP=131.127;EPPR=750.096;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=59.8977;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.957386;PAO=0;PQA=0;PQR=0;PRO=0;QA=2374;QR=13803;RO=352;RPL=0;RPP=131.127;RPPR=767.369;RPR=59;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=350;SRP=750.096;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:46:44,2:44:1723:2:82:0,-6.0677,-147.428 0|0:56:53,2:53:2081:2:77:0,-9.63643,-180.174 0|0:67:64,3:64:2524:3:123:0,-8.70422,-215.854 0|1:70:63,7:63:2441:7:284:-4.86189,0,-198.79 0|1:84:65,19:65:2549:19:770:-44.3336,0,-204.283 0|1:89:63,26:63:2485:26:1038:-66.9223,0,-197.014 dDocent_Contig_4426 29 . G A 6755.24 . AB=0.234873;ABP=769.865;AC=4;AF=0.333333;AN=12;AO=317;CIGAR=1X;DP=2194;DPB=2194;DPRA=0.76652;EPP=691.367;EPPR=4076.69;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998401;PAO=0;PQA=0;PQR=0;PRO=0;QA=12658;QR=74382;RO=1876;RPL=0;RPP=691.367;RPPR=4076.69;RPR=317;RUN=1;SAF=317;SAP=691.367;SAR=0;SRF=1876;SRP=4076.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:350:276,74:276:10943:74:2957:-160.862,0,-878.811 0/1:368:253,115:253:10095:115:4634:-306.194,0,-797.125 0/1:184:131,53:131:5217:53:2100:-133.79,0,-414.006 0/1:354:301,53:301:11837:53:2092:-81.9,0,-957.969 0/0:454:454,0:454:18015:0:0:0,-136.668,-1619.9 0/0:484:461,22:461:18275:22:875:0,-66.6885,-1564.23 dDocent_Contig_4427 24 . T C 361.775 . AB=0.0765172;ABP=1183.75;AC=2;AF=0.166667;AN=12;AO=112;CIGAR=1X1M;DP=2050;DPB=2050;DPRA=0;EPP=246.215;EPPR=3992.01;GTI=0;LEN=1;MEANALT=2.5;MQM=57.0179;MQMR=59.6293;NS=6;NUMALT=2;ODDS=0;PAIRED=0.946429;PAIREDR=0.966249;PAO=0;PQA=0;PQR=0;PRO=0;QA=4411;QR=72834;RO=1837;RPL=0;RPP=246.215;RPPR=3992.01;RPR=112;RUN=1;SAF=112;SAP=246.215;SAR=0;SRF=1837;SRP=3992.01;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:241:222,7,9:222:8773:7,9:283,359:0,-43.4941,-760.474,-37.2903,-733.042,-753.665 0|1:402:331,33,38:331:13155:33,38:1299,1527:-25.4428,-18.2397,-1089.2,0,-974.052,-1069.46 0|0:261:224,9,22:224:8875:9,22:343,822:0,-39.3046,-765.194,-0.960839,-701.424,-722.926 0|1:356:303,32,20:303:11986:32,20:1277,798:-13.9564,0,-973.536,-39.5833,-917.583,-1016.73 0|0:359:341,0,9:341:13542:0,9:0,357:0,-102.651,-1215.28,-73.2594,-1185.9,-1183.19 0|0:431:416,1,14:416:16503:1,14:40,548:0,-121.933,-1478.02,-80.5379,-1433.62,-1432.7 dDocent_Contig_4428 34 . A G 4075.51 . AB=0.270866;ABP=292.589;AC=6;AF=0.5;AN=12;AO=172;CIGAR=1X;DP=635;DPB=635;DPRA=0;EPP=376.504;EPPR=1006.23;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.947674;PAIREDR=0.965368;PAO=0;PQA=0;PQR=0;PRO=0;QA=6756;QR=17955;RO=462;RPL=0;RPP=376.504;RPPR=1006.23;RPR=172;RUN=1;SAF=172;SAP=376.504;SAR=0;SRF=462;SRP=1006.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:106:59,46:59:2245:46:1848:-134.832,0,-170.557 0/1:124:92,32:92:3604:32:1278:-77.9624,0,-287.095 0/1:88:63,25:63:2481:25:1011:-64.7926,0,-196.958 0/1:121:74,47:74:2876:47:1746:-120.918,0,-222.543 0/1:102:90,12:90:3507:12:488:-13.5664,0,-284.992 0/1:94:84,10:84:3242:10:385:-6.70151,0,-263.587 dDocent_Contig_4429 67 . A T 392.21 . AB=0.114754;ABP=474.825;AC=1;AF=0.0833333;AN=12;AO=78;CIGAR=1X;DP=2627;DPB=2627;DPRA=1.10835;EPP=172.385;EPPR=5535.92;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3106;QR=100226;RO=2548;RPL=78;RPP=172.385;RPPR=5535.92;RPR=0;RUN=1;SAF=78;SAP=172.385;SAR=0;SRF=2548;SRP=5535.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:366:324,42:324:12788:42:1671:-40.4429,0,-1039.89 0/0:524:524,0:524:20607:0:0:0,-157.74,-1853.04 0/0:478:468,9:468:18445:9:347:0,-112.196,-1627.05 0/0:537:510,27:510:20017:27:1088:0,-63.4452,-1701.81 0/0:339:339,0:339:13240:0:0:0,-102.049,-1190.75 0/0:383:383,0:383:15129:0:0:0,-115.294,-1360.53 dDocent_Contig_4430 96 . C T 2545.75 . AB=0.280435;ABP=195.629;AC=6;AF=0.5;AN=12;AO=129;CIGAR=1X;DP=460;DPB=460;DPRA=0;EPP=283.13;EPPR=719.596;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.937984;PAIREDR=0.79697;PAO=0;PQA=0;PQR=0;PRO=0;QA=4464;QR=11685;RO=330;RPL=129;RPP=283.13;RPPR=719.596;RPR=0;RUN=1;SAF=129;SAP=283.13;SAR=0;SRF=330;SRP=719.596;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:82:67,15:67:2336:15:505:-21.0843,0,-185.81 0/1:81:72,8:72:2562:8:283:-1.62832,0,-206.669 0/1:43:35,8:35:1242:8:286:-13.1412,0,-99.1388 0/1:89:63,26:63:2265:26:878:-52.5335,0,-177.318 0/1:72:39,33:39:1379:33:1152:-82.3103,0,-102.732 0/1:93:54,39:54:1901:39:1360:-94.6975,0,-143.365 dDocent_Contig_4431 68 . T G 8041.92 . AB=0.21044;ABP=1328.46;AC=2;AF=0.166667;AN=12;AO=457;CIGAR=1X;DP=4301;DPB=4301;DPRA=0;EPP=995.373;EPPR=8341.46;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0.997812;PAIREDR=0.99974;PAO=0;PQA=0;PQR=0;PRO=0;QA=17913;QR=151442;RO=3840;RPL=457;RPP=995.373;RPPR=8341.46;RPR=0;RUN=1;SAF=457;SAP=995.373;SAR=0;SRF=3840;SRP=8341.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:527:523,3:523:20592:3:98:0,-149.565,-1842.5 0/0:733:716,16:716:28315:16:645:0,-162.379,-2487.55 0/0:480:446,34:446:17623:34:1265:0,-30.3795,-1470.57 0/0:741:718,21:718:28306:21:839:0,-147.028,-2469.36 0/1:898:692,206:692:27326:206:8119:-459.997,0,-2186.72 0/1:922:745,177:745:29280:177:6947:-347.417,0,-2355.23 dDocent_Contig_4432 32 . T C 279.46 . AB=0.197183;ABP=59.5603;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=305;DPB=305;DPRA=0.606838;EPP=33.4109;EPPR=634.909;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=565;QR=11604;RO=291;RPL=0;RPP=33.4109;RPPR=634.909;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=291;SRP=634.909;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:608:0:0:0,-4.51545,-55.0574 0/1:46:42,4:42:1675:4:158:-0.751277,0,-137.133 0/1:25:15,10:15:606:10:407:-29.4648,0,-47.3523 0/0:19:19,0:19:763:0:0:0,-5.71957,-68.9925 0/0:101:101,0:101:3986:0:0:0,-30.404,-358.736 0/0:99:99,0:99:3966:0:0:0,-29.802,-356.922 dDocent_Contig_4433 16 . G A 951.639 . AB=0.141975;ABP=544.109;AC=2;AF=0.166667;AN=12;AO=70;CIGAR=1X;DP=1274;DPB=1274;DPRA=1.10927;EPP=155.013;EPPR=2617.46;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998339;PAO=0;PQA=0;PQR=0;PRO=0;QA=2753;QR=48101;RO=1204;RPL=0;RPP=155.013;RPPR=2617.46;RPR=70;RUN=1;SAF=70;SAP=155.013;SAR=0;SRF=1204;SRP=2617.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:228:228,0:228:9144:0:0:0,-68.6348,-822.396 0/0:277:277,0:277:11089:0:0:0,-83.3853,-997.249 0/1:202:166,36:166:6593:36:1438:-68.8608,0,-532.273 0/1:284:251,33:251:9987:33:1275:-29.5249,0,-812.718 0/0:99:99,0:99:3976:0:0:0,-29.802,-357.818 0/0:184:183,1:183:7312:1:40:0,-51.3938,-653.708 dDocent_Contig_4434 1 . N G 93.107 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=93;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:58:-5.50935,-0.60206,0 dDocent_Contig_4435 30 . C T 46.3535 . AB=0.0793651;ABP=99.8304;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=2M1X2M;DP=388;DPB=380;DPRA=1.17373;EPP=10.8276;EPPR=674.342;GTI=0;LEN=1;MEANALT=2.25;MQM=60;MQMR=59.9449;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.881543;PAO=0;PQA=0;PQR=0;PRO=0;QA=406;QR=14330;RO=363;RPL=0;RPP=24.725;RPPR=791.255;RPR=10;RUN=1;SAF=8;SAP=10.8276;SAR=2;SRF=349;SRP=674.342;SRR=14;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:52:46,6,0:46:1810:6,0:235,0:-5.85643,0,-147.468,-19.7038,-149.274,-168.586 0|0:68:64,1,2:64:2537:1,2:38,81:0,-16.1535,-224.67,-12.5744,-218.292,-220.806 0|1:63:56,2,5:56:2227:2,5:68,204:-0.0221248,-11.3863,-194.12,0,-177.89,-181.896 0|0:59:58,1,0:58:2291:1,0:21,0:0,-15.6608,-204.266,-17.4597,-204.567,-206.153 0|0:82:77,3,1:77:3014:3,1:113,40:0,-13.9566,-260.837,-19.8811,-258.445,-267.383 0|0:64:62,0,2:62:2451:0,2:0,81:0,-18.6639,-220.34,-11.5802,-213.661,-213.059 dDocent_Contig_4436 27 . C T 1711.1 . AB=0.118257;ABP=1833.32;AC=4;AF=0.333333;AN=12;AO=175;CIGAR=1X;DP=2142;DPB=2142;DPRA=0.939362;EPP=383.018;EPPR=4267.78;GTI=0;LEN=1;MEANALT=1.6;MQM=59.1086;MQMR=59.9109;NS=6;NUMALT=1;ODDS=0;PAIRED=0.971429;PAIREDR=0.991853;PAO=0;PQA=0;PQR=0;PRO=0;QA=6967;QR=78839;RO=1964;RPL=0;RPP=383.018;RPPR=4267.78;RPR=175;RUN=1;SAF=175;SAP=383.018;SAR=0;SRF=1964;SRP=4267.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:389:350,38:350:13996:38:1507:-18.9767,0,-1141.66 0/1:377:341,35:341:13680:35:1399:-12.591,0,-1116.58 0/1:254:220,33:220:8851:33:1324:-42.8527,0,-717.749 0/1:426:361,65:361:14450:65:2578:-103.912,0,-1168.41 0/0:320:316,4:316:12702:4:159:0,-88.5808,-1131.84 0/0:376:376,0:376:15160:0:0:0,-113.187,-1363.15 dDocent_Contig_4437 40 . C A 97.4888 . AB=0.108491;ABP=285.261;AC=1;AF=0.0833333;AN=12;AO=31;CIGAR=1X;DP=882;DPB=882;DPRA=1.49858;EPP=70.3259;EPPR=1848.76;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.998824;PAO=0;PQA=0;PQR=0;PRO=0;QA=1145;QR=32735;RO=850;RPL=0;RPP=70.3259;RPPR=1848.76;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=850;SRP=1848.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:90:87,3:87:3351:3:115:0,-16.3677,-290.995 0/0:101:101,0:101:3869:0:0:0,-30.404,-348.3 0/0:68:67,0:67:2580:0:0:0,-20.169,-232.016 0/0:184:184,0:184:7053:0:0:0,-55.3895,-634.615 0/1:212:189,23:189:7288:23:831:-11.2718,0,-591.919 0/0:227:222,5:222:8594:5:199:0,-50.0451,-754.88 dDocent_Contig_4439 13 . G A 115431 . AB=0.837695;ABP=4317.72;AC=6;AF=0.5;AN=12;AO=3649;CIGAR=1X;DP=4356;DPB=4356;DPRA=0;EPP=7926.71;EPPR=1536.07;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999452;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=143071;QR=27816;RO=706;RPL=0;RPP=7926.71;RPPR=1536.07;RPR=3649;RUN=1;SAF=3649;SAP=7926.71;SAR=0;SRF=706;SRP=1536.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:666:96,570:96:3812:570:22260:-1801.31,0,-142.611 0/1:639:123,516:123:4881:516:20314:-1634.41,0,-246.844 0/1:630:108,522:108:4230:522:20542:-1657.6,0,-191.053 0/1:669:95,574:95:3730:574:22545:-1825.98,0,-134.35 0/1:827:140,687:140:5560:687:26808:-2161.74,0,-251.294 0/1:925:144,780:144:5603:780:30602:-2473.24,0,-225.618 dDocent_Contig_4440 10 . G A 38537.5 . AB=0.620347;ABP=256.501;AC=6;AF=0.5;AN=12;AO=1250;CIGAR=1X;DP=2015;DPB=2015;DPRA=0;EPP=2717.35;EPPR=1664.19;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.992;PAIREDR=0.997386;PAO=0;PQA=0;PQR=0;PRO=0;QA=49714;QR=30508;RO=765;RPL=0;RPP=2717.35;RPPR=1664.19;RPR=1250;RUN=1;SAF=1250;SAP=2717.35;SAR=0;SRF=765;SRP=1664.19;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:266:152,114:152:6050:114:4536:-328.098,0,-464.197 0/1:316:147,169:147:5879:169:6722:-509.563,0,-433.762 0/1:214:101,113:101:4049:113:4494:-339.969,0,-299.956 0/1:417:169,248:169:6700:248:9913:-766.008,0,-477.176 0/1:324:89,235:89:3542:235:9317:-740.44,0,-221.278 0/1:478:107,371:107:4288:371:14732:-1180.9,0,-241.964 dDocent_Contig_4441 87 . A G 3038.92 . AB=0.0863309;ABP=209.613;AC=0;AF=0;AN=12;AO=12;CIGAR=1X2M1X;DP=263;DPB=263;DPRA=0;EPP=29.068;EPPR=272.273;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.975806;PAO=0;PQA=0;PQR=0;PRO=0;QA=412;QR=4285;RO=124;RPL=12;RPP=29.068;RPPR=272.273;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=124;SRP=272.273;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:24:15,0,9:15:518:0,9:0,311:-21.1006,-25.616,-67.7034,0,-42.4328,-39.7235 0|0:39:22,0,17:22:753:0,17:0,575:-40.3292,-46.9518,-108.077,0,-61.4653,-56.3478 0|0:61:36,0,25:36:1245:0,25:0,859:-59.2629,-70.1,-171.273,0,-101.517,-93.9912 0|0:36:23,2,11:23:803:2,11:68,378:-23.7757,-25.1839,-89.904,0,-59.8116,-62.0155 0|0:54:20,8,26:20:687:8,26:275,895:-66.6738,-50.3614,-103.74,0,-33.4542,-47.9606 0|0:49:8,2,39:8:279:2,39:69,1313:-103.972,-100.774,-122.866,0,-17.0902,-10.955 dDocent_Contig_4442 98 . N A 209.956 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=219;QR=0;RO=0;RPL=8;RPP=20.3821;RPPR=0;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:138:-12.6927,-1.50515,0 1/1:1:0,1:0:0:1:26:-2.59983,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:55:-5.22451,-0.60206,0 dDocent_Contig_4443 114 . C T 2958.58 . AB=0.417445;ABP=22.0124;AC=6;AF=0.5;AN=12;AO=134;CIGAR=1X;DP=321;DPB=321;DPRA=0;EPP=293.988;EPPR=409.076;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.865672;PAIREDR=0.935829;PAO=0;PQA=0;PQR=0;PRO=0;QA=4465;QR=6389;RO=187;RPL=0;RPP=293.988;RPPR=409.076;RPR=134;RUN=1;SAF=0;SAP=293.988;SAR=134;SRF=0;SRP=409.076;SRR=187;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:29,13:29:982:13:427:-26.1019,0,-76.0445 0/1:67:44,23:44:1537:23:790:-51.2491,0,-118.455 0/1:51:29,22:29:988:22:726:-50.2939,0,-73.8754 0/1:47:34,13:34:1126:13:446:-26.3199,0,-87.4865 0/1:55:30,25:30:1034:25:797:-55.4695,0,-76.8139 0/1:59:21,38:21:722:38:1279:-97.6457,0,-47.5397 dDocent_Contig_4444 8 . T C 741.295 . AB=0.227545;ABP=110.687;AC=4;AF=0.333333;AN=12;AO=41;CIGAR=1X;DP=244;DPB=244;DPRA=0;EPP=92.0407;EPPR=443.819;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.682927;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1564;QR=7778;RO=203;RPL=0;RPP=92.0407;RPPR=443.819;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=203;SRP=443.819;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:30,11:30:1149:11:424:-26.1718,0,-91.3669 0/0:28:27,1:27:1040:1:39:0,-4.53228,-90.0083 0/1:46:39,7:39:1497:7:273:-11.0906,0,-121.157 0/1:29:23,6:23:865:6:204:-9.95503,0,-69.4372 0/0:49:47,2:47:1818:2:78:0,-7.347,-156.466 0/1:51:37,14:37:1409:14:546:-34.1338,0,-111.73 dDocent_Contig_4445 61 . T G 7654.43 . AB=0.235744;ABP=875.223;AC=5;AF=0.416667;AN=12;AO=367;CIGAR=1X3M;DP=1796;DPB=1795.75;DPRA=0;EPP=799.941;EPPR=2973.58;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=14305;QR=52856;RO=1368;RPL=367;RPP=799.941;RPPR=2973.58;RPR=0;RUN=1;SAF=367;SAP=799.941;SAR=0;SRF=1368;SRP=2973.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:344:240,1,102:240:9176:1,102:36,4008:-257.411,-326.721,-1079.32,0,-749.982,-722.214 0|0:358:327,1,28:327:12427:1,28:34,1072:0,-95.6797,-1114.51,-10.3224,-1026.85,-1021.18 0|1:286:247,10,27:247:9625:10,27:361,1086:-15.1831,-60.0913,-848.129,0,-761.64,-782.965 0|1:359:222,30,104:222:8648:30,104:1135,4038:-264.94,-238.728,-940.441,0,-617.722,-679.455 0|1:228:154,0,72:154:6000:0,72:0,2766:-180.848,-227.206,-720.335,0,-493.323,-471.649 0|1:221:178,8,34:178:6980:8,34:254,1335:-56.2834,-89.4397,-661.032,0,-553.65,-563.852 dDocent_Contig_4447 67 . A G 1216.33 . AB=0.105231;ABP=2228.38;AC=2;AF=0.166667;AN=12;AO=237;CIGAR=1X;DP=4525;DPB=4525;DPRA=0;EPP=517.649;EPPR=9307.77;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997666;PAO=0;PQA=0;PQR=0;PRO=0;QA=9389;QR=167025;RO=4285;RPL=237;RPP=517.649;RPPR=9307.77;RPR=0;RUN=1;SAF=237;SAP=517.649;SAR=0;SRF=4285;SRP=9307.77;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:647:631,15:631:24620:15:592:0,-140.94,-2160.29 0/1:780:713,67:713:27793:67:2646:-3.47216,0,-2264.42 0/0:502:484,18:484:18899:18:698:0,-87.9828,-1636.45 0/0:827:813,13:813:31684:13:499:0,-203.688,-2803.79 0/0:905:886,18:886:34462:18:715:0,-207.862,-3034.17 0/1:864:758,106:758:29567:106:4239:-121.38,0,-2398.64 dDocent_Contig_4448 107 . N A 61.7453 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=65;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:65:-6.17345,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_4449 148 . C T 1718.4 . AB=0.47619;ABP=3.63072;AC=4;AF=0.333333;AN=12;AO=60;CIGAR=1X;DP=176;DPB=176;DPRA=1.26;EPP=133.299;EPPR=254.901;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.866667;PAIREDR=0.87931;PAO=0;PQA=0;PQR=0;PRO=0;QA=2396;QR=4608;RO=116;RPL=0;RPP=133.299;RPPR=254.901;RPR=60;RUN=1;SAF=0;SAP=133.299;SAR=60;SRF=0;SRP=254.901;SRR=116;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:13,15:13:510:15:610:-46.8084,0,-37.8104 0/1:28:16,12:16:642:12:475:-34.671,0,-49.6837 0/1:30:16,14:16:633:14:563:-41.982,0,-48.2693 0/1:40:21,19:21:827:19:748:-55.6002,0,-62.7019 0/0:17:17,0:17:679:0:0:0,-5.11751,-61.4385 0/0:33:33,0:33:1317:0:0:0,-9.93399,-118.792 dDocent_Contig_4450 15 . G C 516.797 . AB=0.111722;ABP=717.989;AC=3;AF=0.25;AN=12;AO=80;CIGAR=2X;DP=998;DPB=998;DPRA=2.05897;EPP=176.728;EPPR=1994.25;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.9875;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3199;QR=36312;RO=917;RPL=0;RPP=176.728;RPPR=1994.25;RPR=80;RUN=1;SAF=80;SAP=176.728;SAR=0;SRF=917;SRP=1994.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:189:165,24:165:6549:24:964:-30.1637,0,-532.251 0|0:257:238,19:238:9380:19:751:0,-9.45375,-775.768 0|1:124:109,15:109:4328:15:602:-17.1908,0,-352.153 0|1:233:211,22:211:8344:22:882:-9.54713,0,-680.399 0|0:106:105,0:105:4200:0:0:0,-31.6081,-377.867 0|0:89:89,0:89:3511:0:0:0,-26.7917,-316.049 dDocent_Contig_4451 17 . C T 11322.8 . AB=0.537464;ABP=11.4709;AC=2;AF=0.166667;AN=12;AO=376;CIGAR=1X;DP=1073;DPB=1073;DPRA=2.03066;EPP=819.484;EPPR=1510.01;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=15064;QR=27712;RO=694;RPL=0;RPP=819.484;RPPR=1510.01;RPR=376;RUN=1;SAF=376;SAP=819.484;SAR=0;SRF=694;SRP=1510.01;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:22,1:22:872:1:40:0,-2.92801,-74.7959 0/0:144:141,2:141:5652:2:76:0,-36.0329,-501.351 0/0:84:84,0:84:3401:0:0:0,-25.2865,-306.117 0/0:128:127,0:127:5035:0:0:0,-38.2308,-452.919 0/1:288:131,157:131:5222:157:6290:-479.135,0,-383.138 0/1:406:189,216:189:7530:216:8658:-656.371,0,-554.993 dDocent_Contig_4452 91 . T A 1931.06 . AB=0.176136;ABP=804.728;AC=6;AF=0.5;AN=12;AO=155;CIGAR=1X3M;DP=880;DPB=881.75;DPRA=0;EPP=339.589;EPPR=1551.27;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5176;QR=24019;RO=713;RPL=155;RPP=339.589;RPPR=1551.27;RPR=0;RUN=1;SAF=155;SAP=339.589;SAR=0;SRF=713;SRP=1551.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:89:73,0,15:73:2469:0,15:0,522:-20.4697,-42.4449,-242.599,0,-200.151,-195.636 0|1:98:86,1,11:86:2908:1,11:34,367:-3.81389,-26.9439,-262.392,0,-232.985,-232.432 0|1:76:40,6,29:40:1332:6,29:204,920:-61.9858,-57.4757,-163.478,0,-91.2454,-99.064 0|1:229:197,0,31:197:6684:0,31:0,1044:-25.2911,-84.594,-626.653,0,-542.056,-532.724 0|1:241:188,0,52:188:6304:0,52:0,1743:-84.544,-141.138,-651.721,0,-510.559,-494.906 0|1:147:129,0,17:129:4322:0,17:0,580:-8.22237,-47.0552,-397.07,0,-350.006,-344.888 dDocent_Contig_4453 18 . A T 2505.08 . AB=0.184767;ABP=614.97;AC=4;AF=0.333333;AN=12;AO=140;CIGAR=1X3M;DP=1110;DPB=1110;DPRA=1.576;EPP=307.016;EPPR=2057.22;GTI=0;LEN=1;MEANALT=1.8;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5547;QR=37393;RO=946;RPL=0;RPP=307.016;RPPR=2057.22;RPR=140;RUN=1;SAF=140;SAP=307.016;SAR=0;SRF=946;SRP=2057.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:125:117,7,0:117:4624:7,0:279,0:0,-12.2284,-390.635,-35.2205,-392.742,-415.718 0|1:203:167,0,36:167:6567:0,36:0,1437:-68.4766,-118.749,-658.891,0,-540.54,-529.703 0|1:113:77,5,31:77:3076:5,31:201,1212:-76.4503,-83.0637,-334.922,0,-236.79,-244.023 0|1:214:172,4,38:172:6820:4,38:158,1512:-72.7205,-111.496,-671.664,0,-548.373,-549.935 0|1:179:152,1,26:152:5973:1,26:41,1042:-40.0825,-82.4546,-573.407,0,-487.859,-483.417 0|0:276:261,6,9:261:10333:6,9:240,344:0,-58.7915,-907.413,-50.3573,-880.998,-898.059 dDocent_Contig_4454 22 . C A 87.1499 . AB=0.134328;ABP=80.8268;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=438;DPB=438;DPRA=0.902965;EPP=22.5536;EPPR=932.4;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995327;PAO=0;PQA=0;PQR=0;PRO=0;QA=334;QR=16703;RO=428;RPL=0;RPP=22.5536;RPPR=932.4;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=428;SRP=932.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:65:65,0:65:2494:0:0:0,-19.5669,-224.632 0/0:87:87,0:87:3378:0:0:0,-26.1896,-304.123 0/0:55:54,0:54:2120:0:0:0,-16.2556,-190.903 0/0:88:88,0:88:3445:0:0:0,-26.4906,-310.127 0/0:76:76,0:76:2975:0:0:0,-22.8783,-267.869 0/1:67:58,9:58:2291:9:334:-10.2379,0,-186.201 dDocent_Contig_4455 8 . T C 31365.3 . AB=0.850972;ABP=498.392;AC=9;AF=0.75;AN=12;AO=985;CIGAR=1X2M;DP=1092;DPB=1092;DPRA=0;EPP=2141.91;EPPR=207.129;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.994924;PAIREDR=0.978723;PAO=0;PQA=0;PQR=0;PRO=0;QA=37804;QR=3587;RO=94;RPL=0;RPP=2141.91;RPPR=207.129;RPR=985;RUN=1;SAF=985;SAP=2141.91;SAR=0;SRF=94;SRP=207.129;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:140:17,10,113:17:645:10,113:388,4363:-353.208,-326.445,-376.321,0,-20.9989,-18.8657 0|1:217:19,0,198:19:728:0,198:0,7592:-617.784,-623.503,-683.25,0,-60.1295,-0.525562 0|1:106:22,1,83:22:838:1,83:28,3205:-256.706,-261.111,-329.547,0,-66.6194,-43.8482 1|1:200:16,0,182:16:610:0,182:0,6973:-572.209,-577.025,-627.066,-4.74086,-54.7875,0 1|1:199:11,0,188:11:419:0,188:0,7213:-610.971,-614.283,-648.652,-21.8439,-56.5936,0 1|1:230:9,0,221:9:347:0,221:0,8458:-729.4,-732.109,-760.604,-37.6473,-66.5276,0 dDocent_Contig_4456 47 . G C 364.19 . AB=0.141361;ABP=216.394;AC=1;AF=0.0833333;AN=12;AO=42;CIGAR=1X;DP=1496;DPB=1496;DPRA=0.764151;EPP=94.2121;EPPR=3147.31;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.40427;PAO=0;PQA=0;PQR=0;PRO=0;QA=1655;QR=57309;RO=1452;RPL=0;RPP=94.2121;RPPR=3147.31;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=1452;SRP=3155.99;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:191:164,27:164:6424:27:1054:-37.6409,0,-520.421 0/0:396:396,0:396:15638:0:0:0,-119.208,-1406.24 0/0:178:164,14:164:6543:14:560:0,-2.84116,-537.839 0/0:242:241,0:241:9451:0:0:0,-72.5482,-849.79 0/0:210:210,0:210:8287:0:0:0,-63.2163,-745.394 0/0:279:277,1:277:10966:1:41:0,-80.0012,-982.137 dDocent_Contig_4457 130 . G A 739.639 . AB=0.157895;ABP=389.304;AC=4;AF=0.333333;AN=12;AO=60;CIGAR=1X;DP=521;DPB=521;DPRA=1.34752;EPP=133.299;EPPR=1004.06;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=45.4946;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.984816;PAO=0;PQA=0;PQR=0;PRO=0;QA=2299;QR=17462;RO=461;RPL=0;RPP=133.299;RPPR=1004.06;RPR=60;RUN=1;SAF=0;SAP=133.299;SAR=60;SRF=0;SRP=1004.06;SRR=461;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:98:83,15:83:3096:15:574:-19.2951,0,-242.724 0/1:83:72,11:72:2723:11:426:-11.3015,0,-208.631 0/1:64:47,17:47:1799:17:651:-35.9589,0,-127.054 0/1:135:118,17:118:4481:17:648:-14.6301,0,-348.623 0/0:83:83,0:83:3172:0:0:0,-24.9855,-273.55 0/0:58:58,0:58:2191:0:0:0,-17.4597,-187.431 dDocent_Contig_4458 43 . G A 31185.6 . AB=0.399929;ABP=247.258;AC=6;AF=0.5;AN=12;AO=1123;CIGAR=1X;DP=2808;DPB=2808;DPRA=0;EPP=2441.57;EPPR=3657.6;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997029;PAO=0;PQA=0;PQR=0;PRO=0;QA=44185;QR=66390;RO=1683;RPL=0;RPP=2441.57;RPPR=3657.6;RPR=1123;RUN=1;SAF=1123;SAP=2441.57;SAR=0;SRF=1683;SRP=3657.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:352:264,88:264:10385:88:3476:-206.932,0,-828.068 0/1:464:351,112:351:13898:112:4379:-254.605,0,-1110.37 0/1:252:226,26:226:8938:26:1020:-16.2315,0,-728.059 0/1:547:363,184:363:14284:184:7278:-490.035,0,-1119.91 0/1:515:185,330:185:7367:330:12956:-1010.12,0,-507.658 0/1:678:294,383:294:11518:383:15076:-1151.86,0,-832.002 dDocent_Contig_4459 14 . A T 10803.4 . AB=0.126406;ABP=2266.4;AC=4;AF=0.333333;AN=12;AO=236;CIGAR=1X3M2X3M1X;DP=1867;DPB=1867;DPRA=0;EPP=515.478;EPPR=2706.49;GTI=0;LEN=1;MEANALT=6;MQM=57.9534;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0.899598;PAO=0;PQA=0;PQR=0;PRO=0;QA=9084;QR=48430;RO=1245;RPL=0;RPP=515.478;RPPR=2706.49;RPR=236;RUN=1;SAF=236;SAP=515.478;SAR=0;SRF=1245;SRP=2706.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:155:118,32,4,0:118:4572:32,4,0:1236,153,0:-65.9447,0,-365.98,-88.9799,-363.127,-463.368,-101.466,-375.613,-464.572,-477.059 0|1:208:139,57,10,0:139:5372:57,10,0:2177,378,0:-136.59,0,-424.085,-148.299,-411.11,-586.504,-178.433,-441.244,-589.514,-619.648 0|1:182:133,23,6,13:133:5176:23,6,13:872,230,515:-31.28,0,-418.441,-52.5083,-406.556,-476.073,-28.9271,-382.978,-435.492,-450.388 0|1:204:138,46,15,0:138:5370:46,15,0:1768,566,0:-103.43,0,-427.504,-99.8025,-396.181,-536.612,-144.972,-441.351,-541.127,-586.297 0|0:422:245,37,6,126:245:9526:37,6,126:1428,231,5094:-346.23,-302.947,-1074.59,-401.529,-1067.28,-1182.51,0,-665.759,-764.343,-744.868 0|0:696:472,41,0,166:472:18414:41,0,166:1603,0,6676:-408.086,-418.866,-1920.13,-550.173,-1932.48,-2063.78,0,-1382.32,-1513.63,-1463.66 dDocent_Contig_4460 118 . G A 33.201 . AB=0.185185;ABP=26.2531;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=245;DPB=245;DPRA=1.81609;EPP=18.2106;EPPR=49.1976;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=54.8819;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.637131;PAO=0;PQA=0;PQR=0;PRO=0;QA=200;QR=8546;RO=237;RPL=0;RPP=18.2106;RPPR=517.649;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=83;SRP=49.1976;SRR=154;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1515:0:0:0,-12.3422,-134.81 0/0:65:64,1:64:2312:1:31:0,-16.4675,-202.012 0/0:21:21,0:21:744:0:0:0,-6.32163,-67.0393 0/0:66:64,1:64:2359:1:28:0,-16.9772,-206.084 0/1:27:22,5:22:762:5:141:-4.84277,0,-60.7729 0/0:25:25,0:25:854:0:0:0,-7.52575,-77.1735 dDocent_Contig_4461 98 . N G 398.141 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=14;CIGAR=2X;DP=14;DPB=15.5;DPRA=0;EPP=33.4109;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=14.3092;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=439;QR=0;RO=0;RPL=14;RPP=33.4109;RPPR=0;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:14:0,14:0:0:14:439:-39.8141,-4.21442,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_4462 98 . N T 261.456 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=9;CIGAR=2X;DP=9;DPB=14.5;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0.111111;PAIREDR=0;PAO=6;PQA=181;PQR=0;PRO=0;QA=285;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:1:0,1:0:0:1:35:-3.15375,-0.30103,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:1:0,1:0:0:1:30:-2.69295,-0.30103,0 1|1:7:0,7:0:0:7:220:-19.8199,-2.10721,0 dDocent_Contig_4463 31 . C T 777.366 . AB=0.219653;ABP=121.111;AC=2;AF=0.166667;AN=12;AO=38;CIGAR=1X;DP=456;DPB=456;DPRA=1.22261;EPP=85.5263;EPPR=910.686;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.973684;PAIREDR=0.837321;PAO=0;PQA=0;PQR=0;PRO=0;QA=1471;QR=16567;RO=418;RPL=0;RPP=85.5263;RPPR=910.686;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=418;SRP=910.686;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:59,0:59:2362:0:0:0,-17.7608,-212.737 0/0:103:103,0:103:4034:0:0:0,-31.0061,-363.048 0/0:53:53,0:53:2114:0:0:0,-15.9546,-190.447 0/0:68:68,0:68:2682:0:0:0,-20.47,-241.5 0/1:80:60,20:60:2420:20:771:-45.6269,0,-193.858 0/1:93:75,18:75:2955:18:700:-35.3316,0,-238.052 dDocent_Contig_4464 18 . T A 704.409 . AB=0.122677;ABP=668.32;AC=2;AF=0.166667;AN=12;AO=117;CIGAR=1X;DP=1498;DPB=1498;DPRA=0;EPP=257.073;EPPR=3001.81;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.982906;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4648;QR=55643;RO=1381;RPL=0;RPP=257.073;RPPR=3001.81;RPR=117;RUN=1;SAF=117;SAP=257.073;SAR=0;SRF=1381;SRP=3001.81;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:167:140,27:140:5648:27:1074:-46.6807,0,-457.827 0/0:217:205,12:205:8284:12:475:0,-22.2219,-701.953 0/0:198:193,5:193:7761:5:205:0,-40.7689,-679.205 0/0:254:236,18:236:9525:18:723:0,-11.0659,-791.206 0/0:291:275,16:275:11002:16:633:0,-30.2941,-932.085 0/1:371:332,39:332:13423:39:1538:-26.9821,0,-1095.31 dDocent_Contig_4465 19 . T C 236.888 . AB=0.100218;ABP=640.207;AC=1;AF=0.0833333;AN=12;AO=122;CIGAR=1X;DP=4964;DPB=4964;DPRA=0.747863;EPP=267.93;EPPR=10515.1;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999587;PAO=0;PQA=0;PQR=0;PRO=0;QA=4780;QR=189484;RO=4841;RPL=0;RPP=267.93;RPPR=10515.1;RPR=122;RUN=1;SAF=122;SAP=267.93;SAR=0;SRF=4841;SRP=10515.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:486:466,19:466:18148:19:719:0,-81.0915,-1567.07 0/0:695:639,56:639:24712:56:2212:0,-9.96096,-2023.05 0/1:459:413,46:413:16319:46:1813:-25.2117,0,-1329.35 0/0:665:665,0:665:26016:0:0:0,-200.185,-2339.36 0/0:1335:1334,1:1334:52389:1:36:0,-398.277,-4706.81 0/0:1324:1324,0:1324:51900:0:0:0,-398.564,-4666.45 dDocent_Contig_4467 107 . N C 239.524 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=244;QR=0;RO=0;RPL=0;RPP=18.2106;RPPR=0;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:139:-12.8527,-1.20412,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_4468 52 . G T 135.864 . AB=0.13;ABP=121.92;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=309;DPB=309;DPRA=0.956938;EPP=31.2394;EPPR=645.766;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.769231;PAIREDR=0.844595;PAO=0;PQA=0;PQR=0;PRO=0;QA=513;QR=11124;RO=296;RPL=13;RPP=31.2394;RPPR=645.766;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=296;SRP=645.766;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:977:0:0:0,-8.42884,-88.2227 0/0:53:53,0:53:1904:0:0:0,-15.9546,-171.595 0/0:53:53,0:53:2030:0:0:0,-15.9546,-182.888 0/0:75:75,0:75:2889:0:0:0,-22.5772,-260.121 0/1:37:31,6:31:1179:6:236:-10.473,0,-95.2471 0/1:63:56,7:56:2145:7:277:-6.33523,0,-174.266 dDocent_Contig_4469 27 . A G 859.327 . AB=0.160112;ABP=360.23;AC=2;AF=0.166667;AN=12;AO=80;CIGAR=1X;DP=1102;DPB=1102;DPRA=0.654264;EPP=176.728;EPPR=2220.08;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.975;PAIREDR=0.984329;PAO=0;PQA=0;PQR=0;PRO=0;QA=3074;QR=40345;RO=1021;RPL=0;RPP=176.728;RPPR=2220.08;RPR=80;RUN=1;SAF=80;SAP=176.728;SAR=0;SRF=1021;SRP=2220.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:138:128,10:128:5033:10:383:0,-6.72139,-418.062 0/1:171:146,25:146:5763:25:985:-37.4705,0,-467.04 0/0:144:132,12:132:5206:12:476:0,-0.156479,-425.234 0/1:185:153,32:153:6053:32:1190:-51.6835,0,-488.885 0/0:258:258,0:258:10200:0:0:0,-77.6657,-917.402 0/0:206:204,1:204:8090:1:40:0,-58.12,-723.691 dDocent_Contig_4470 98 . N T 97.0363 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=104;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:104:-9.70309,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_4471 13 . G C 71522.5 . AB=0.592319;ABP=294.091;AC=6;AF=0.5;AN=12;AO=2329;CIGAR=1X;DP=3932;DPB=3932;DPRA=0;EPP=5060.37;EPPR=3481.71;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997503;PAO=0;PQA=0;PQR=0;PRO=0;QA=92827;QR=63430;RO=1602;RPL=0;RPP=5060.37;RPPR=3481.71;RPR=2329;RUN=1;SAF=2329;SAP=5060.37;SAR=0;SRF=1602;SRP=3481.71;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:505:233,272:233:9186:272:10713:-811.473,0,-674.202 0/1:721:328,393:328:13022:393:15703:-1194.99,0,-954.002 0/1:304:153,151:153:6045:151:6014:-449.525,0,-452.308 0/1:786:389,396:389:15370:396:15798:-1183.88,0,-1145.46 0/1:728:193,535:193:7661:535:21269:-1693.27,0,-469.957 0/1:888:306,582:306:12146:582:23330:-1830.33,0,-824.99 dDocent_Contig_4472 14 . A C 984.422 . AB=0.128728;ABP=765.681;AC=3;AF=0.25;AN=12;AO=93;CIGAR=1X;DP=1278;DPB=1278;DPRA=0;EPP=204.957;EPPR=2574.03;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.989247;PAIREDR=0.945946;PAO=0;PQA=0;PQR=0;PRO=0;QA=3713;QR=47326;RO=1184;RPL=0;RPP=204.957;RPPR=2574.03;RPR=93;RUN=1;SAF=93;SAP=204.957;SAR=0;SRF=1184;SRP=2574.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:162:141,21:141:5669:21:844:-27.504,0,-461.242 0/1:221:188,33:188:7507:33:1304:-51.0903,0,-608.719 0/0:136:129,7:129:5122:7:285:0,-14.9157,-434.833 0/1:254:226,28:226:9045:28:1125:-25.0698,0,-737.041 0/0:217:213,3:213:8530:3:123:0,-53.7201,-755.815 0/0:288:287,1:287:11453:1:32:0,-83.4973,-1026.79 dDocent_Contig_4473 27 . C T 20927.8 . AB=0.438421;ABP=58.9043;AC=5;AF=0.416667;AN=12;AO=744;CIGAR=1X;DP=1955;DPB=1955;DPRA=1.3155;EPP=1618.59;EPPR=2571.86;GTI=0;LEN=1;MEANALT=2.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.995968;PAIREDR=0.999155;PAO=0;PQA=0;PQR=0;PRO=0;QA=28968;QR=44241;RO=1183;RPL=0;RPP=1618.59;RPPR=2571.86;RPR=744;RUN=1;SAF=744;SAP=1618.59;SAR=0;SRF=1183;SRP=2571.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:326:157,160:157:5798:160:6179:-460.129,0,-426.009 0/1:453:291,160:291:10797:160:6222:-423.632,0,-835.165 0/1:188:85,102:85:3157:102:3985:-301.993,0,-227.604 0/1:390:185,191:185:6949:191:7466:-558.044,0,-511.704 0/0:258:257,0:257:9685:0:0:0,-77.3647,-871.194 0/1:340:208,131:208:7855:131:5116:-358.2,0,-604.594 dDocent_Contig_4474 1 . N G 74.9833 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=79;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:79:-7.49724,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_4475 70 . A T 114.218 . AB=0.2;ABP=30.3709;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=240;DPB=240;DPRA=0.840237;EPP=22.5536;EPPR=504.62;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.888889;PAIREDR=0.692641;PAO=0;PQA=0;PQR=0;PRO=0;QA=329;QR=8641;RO=231;RPL=9;RPP=22.5536;RPPR=495.972;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=230;SRP=495.972;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1504:0:0:0,-12.3422,-135.651 0/0:36:34,2:34:1228:2:72:0,-4.00044,-103.985 0/1:35:28,7:28:1075:7:257:-12.9447,0,-86.5194 0/0:47:47,0:47:1797:0:0:0,-14.1484,-161.985 0/0:32:32,0:32:1201:0:0:0,-9.63296,-108.387 0/0:49:49,0:49:1836:0:0:0,-14.7505,-165.486 dDocent_Contig_4476 98 . N C 174.869 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=180;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:132:-12.2066,-1.20412,0 1/1:1:0,1:0:0:1:19:-1.89997,-0.30103,0 dDocent_Contig_4477 28 . T A 560.2 . AB=0.216;ABP=90.5814;AC=2;AF=0.166667;AN=12;AO=28;CIGAR=1X;DP=460;DPB=460;DPRA=0.862348;EPP=63.8115;EPPR=941.086;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.928571;PAIREDR=0.972222;PAO=0;PQA=0;PQR=0;PRO=0;QA=1095;QR=17247;RO=432;RPL=0;RPP=63.8115;RPPR=941.086;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=432;SRP=941.086;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:88:87,1:87:3462:1:40:0,-22.495,-307.623 0/0:82:82,0:82:3293:0:0:0,-24.6845,-296.418 0/0:62:62,0:62:2479:0:0:0,-18.6639,-223.253 0/0:103:103,0:103:4113:0:0:0,-31.0061,-370.143 0/1:70:48,22:48:1918:22:870:-57.5409,0,-151.749 0/1:55:50,5:50:1982:5:185:-0.450101,0,-162.016 dDocent_Contig_4478 21 . G A 244.731 . AB=0.158879;ABP=111.158;AC=3;AF=0.25;AN=12;AO=20;CIGAR=1X;DP=208;DPB=208;DPRA=0.745455;EPP=46.4397;EPPR=411.247;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9468;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.9;PAIREDR=0.707447;PAO=0;PQA=0;PQR=0;PRO=0;QA=787;QR=7437;RO=188;RPL=0;RPP=46.4397;RPPR=411.247;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=188;SRP=411.247;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:27,1:27:1035:1:32:0,-5.22953,-90.2408 0/1:39:33,6:33:1332:6:226:-8.95635,0,-108.399 0/1:18:16,2:16:642:2:81:-2.26719,0,-52.6945 0/1:50:41,9:41:1633:9:368:-18.4339,0,-132.146 0/0:29:27,2:27:1051:2:80:0,-1.13829,-87.2797 0/0:44:44,0:44:1744:0:0:0,-13.2453,-157.169 dDocent_Contig_4479 49 . A T 38508.1 . AB=0.098473;ABP=4496.81;AC=0;AF=0;AN=12;AO=316;CIGAR=1X1M1X;DP=3882;DPB=3882;DPRA=0;EPP=689.196;EPPR=4708.59;GTI=0;LEN=1;MEANALT=2.8;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.986156;PAO=0;PQA=0;PQR=0;PRO=0;QA=12451;QR=84894;RO=2167;RPL=316;RPP=689.196;RPPR=4708.59;RPR=0;RUN=1;SAF=316;SAP=689.196;SAR=0;SRF=2167;SRP=4708.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:526:302,29,195:302:11823:29,195:1144,7734:-545.666,-542.461,-1505.78,0,-877.928,-913.345 0|0:835:457,131,245:457:17924:131,245:5164,9566:-648.695,-361.434,-1795.94,0,-1049.11,-1400.18 0|0:346:165,72,109:165:6498:72,109:2863,4305:-304.549,-118.502,-631.366,0,-298.819,-501.723 0|0:761:302,73,386:302:11813:73,386:2840,15253:-1164.17,-1021.71,-1970.9,0,-737.798,-854.969 0|0:673:445,0,227:445:17469:0,227:0,8961:-603.288,-737.247,-2173.87,0,-1436.61,-1368.28 0|0:741:496,11,232:496:19367:11,232:440,9063:-595.667,-708.733,-2297.37,0,-1555.73,-1522.14 dDocent_Contig_4480 1 . N G 366.996 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=10;CIGAR=1X;DP=10;DPB=10;DPRA=0;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=396;QR=0;RO=0;RPL=0;RPP=24.725;RPPR=0;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:8:0,8:0:0:8:315:-28.7123,-2.40824,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_4481 29 . G A 481.326 . AB=0.256098;ABP=45.3805;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1X;DP=217;DPB=217;DPRA=1.1194;EPP=52.9542;EPPR=422.104;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.434783;PAIREDR=0.61658;PAO=0;PQA=0;PQR=0;PRO=0;QA=919;QR=7663;RO=193;RPL=0;RPP=52.9542;RPPR=422.104;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=193;SRP=422.104;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:547:0:0:0,-4.21442,-49.5682 0/0:53:52,0:52:2049:0:0:0,-15.6536,-184.192 0/0:21:20,1:20:801:1:41:0,-2.22706,-68.3103 0/0:47:46,1:46:1831:1:41:0,-10.0538,-160.904 0/1:31:23,8:23:914:8:314:-19.2904,0,-73.2303 0/1:51:38,13:38:1521:13:523:-32.0641,0,-121.782 dDocent_Contig_4482 25 . T C 7466.74 . AB=0.527897;ABP=6.16033;AC=2;AF=0.166667;AN=12;AO=247;CIGAR=1X;DP=807;DPB=807;DPRA=2.21514;EPP=539.364;EPPR=1219.03;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.969643;PAO=0;PQA=0;PQR=0;PRO=0;QA=9934;QR=22393;RO=560;RPL=0;RPP=539.364;RPPR=1219.03;RPR=247;RUN=1;SAF=247;SAP=539.364;SAR=0;SRF=560;SRP=1219.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:72:72,0:72:2842:0:0:0,-21.6742,-255.874 0/0:90:89,1:89:3563:1:40:0,-23.097,-316.698 0/0:88:88,0:88:3568:0:0:0,-26.4906,-321.129 0/0:91:91,0:91:3667:0:0:0,-27.3937,-330.031 0/1:235:120,115:120:4779:115:4609:-343.963,0,-359.267 0/1:231:100,131:100:3974:131:5285:-405.932,0,-288.103 dDocent_Contig_4483 31 . C T 21675.2 . AB=0.0400867;ABP=1698.78;AC=0;AF=0;AN=12;AO=37;CIGAR=2X;DP=1622;DPB=1622;DPRA=0;EPP=83.3548;EPPR=1814.02;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.997602;PAO=0;PQA=0;PQR=0;PRO=0;QA=1281;QR=32401;RO=834;RPL=0;RPP=83.3548;RPPR=1814.02;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=834;SRP=1814.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:160:94,10,56:94:3658:10,56:347,2218:-154.291,-154.388,-451.985,0,-272.446,-283.792 0|0:257:141,5,111:141:5496:5,111:152,4427:-322.223,-352.502,-802.705,0,-439.628,-418.381 0|0:247:130,19,97:130:5067:19,97:681,3788:-272.256,-255.858,-666.588,0,-360.943,-387.276 0|0:259:143,3,112:143:5504:3,112:101,4399:-318.834,-353.699,-804.651,0,-443.784,-418.252 0|0:324:116,0,208:116:4505:0,208:0,8209:-640.879,-675.799,-1045.95,0,-370.538,-307.924 0|0:375:210,0,164:210:8171:0,164:0,6481:-470.253,-533.469,-1204.95,0,-671.658,-622.289 dDocent_Contig_4484 51 . G A 1286.13 . AB=0.215488;ABP=211.83;AC=3;AF=0.25;AN=12;AO=71;CIGAR=1X;DP=567;DPB=567;DPRA=0;EPP=157.185;EPPR=1080.06;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.901408;PAIREDR=0.792339;PAO=0;PQA=0;PQR=0;PRO=0;QA=2745;QR=19153;RO=496;RPL=71;RPP=157.185;RPPR=1080.06;RPR=0;RUN=1;SAF=71;SAP=157.185;SAR=0;SRF=496;SRP=1080.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:65:61,4:61:2321:4:154:0,-5.33396,-194.836 0/0:97:95,2:95:3665:2:80:0,-21.6081,-322.315 0/0:108:107,1:107:4174:1:41:0,-28.4167,-371.563 0/1:101:85,16:85:3254:16:624:-26.0914,0,-262.574 0/1:78:69,9:69:2666:9:351:-8.46825,0,-216.601 0/1:118:79,39:79:3073:39:1495:-99.2748,0,-241.149 dDocent_Contig_4485 13 . C T 87.1028 . AB=0.123077;ABP=83.2212;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=440;DPB=440;DPRA=1.4469;EPP=31.2394;EPPR=930.229;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992974;PAO=0;PQA=0;PQR=0;PRO=0;QA=528;QR=16939;RO=427;RPL=0;RPP=31.2394;RPPR=930.229;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=427;SRP=930.229;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:44,0:44:1740:0:0:0,-13.2453,-156.831 0/0:69:69,0:69:2760:0:0:0,-20.7711,-248.514 0/0:80:78,2:78:3112:2:80:0,-16.4906,-272.574 0/0:77:75,2:75:2936:2:81:0,-15.4936,-256.673 0/1:65:57,8:57:2259:8:327:-10.2332,0,-183.92 0/0:105:104,1:104:4132:1:40:0,-27.6125,-367.873 dDocent_Contig_4486 36 . T A 3417.54 . AB=0.0708861;ABP=634.777;AC=0;AF=0;AN=12;AO=28;CIGAR=6M1X1M1X;DP=994;DPB=905.111;DPRA=0;EPP=63.8115;EPPR=1477.45;GTI=0;LEN=1;MEANALT=4.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.994143;PAO=0;PQA=0;PQR=0;PRO=0;QA=1077;QR=26718;RO=683;RPL=0;RPP=63.8115;RPPR=1486.13;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=682;SRP=1477.45;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:143:108,0,7,27:108:4248:0,7,27:0,269,1082:-56.6352,-89.1465,-438.57,-67.0685,-416.489,-414.382,0,-349.433,-327.352,-341.305 0|0:194:120,0,35,30:120:4684:0,35,30:0,1295,1202:-69.7835,-105.907,-490.935,0,-385.021,-374.485,-6.8703,-391.909,-285.995,-382.878 0|0:103:59,0,27,12:59:2331:0,27,12:0,1030,480:-66.716,-84.4768,-276.297,0,-191.814,-183.686,-44.9337,-236.758,-152.275,-233.146 0|0:255:185,12,33,16:185:7172:12,33,16:469,1225,634:-44.5292,-61.6604,-647.244,0,-550.629,-579.253,-48.0348,-598.675,-537.005,-632.416 0|0:140:103,16,19,0:103:4051:16,19,0:608,713,0:-27.3897,-8.54416,-336.96,0,-283.38,-327.51,-58.3958,-341.777,-333.229,-391.626 0|0:159:108,0,39,0:108:4232:0,39,0:0,1470,0:-87.9219,-120.433,-468.434,0,-348,-336.26,-120.433,-468.434,-348,-468.434 dDocent_Contig_4487 20 . T C 341.534 . AB=0.109785;ABP=557.171;AC=2;AF=0.166667;AN=12;AO=66;CIGAR=1X;DP=1314;DPB=1314;DPRA=0;EPP=146.327;EPPR=2713.01;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.969697;PAIREDR=0.984776;PAO=0;PQA=0;PQR=0;PRO=0;QA=2611;QR=48253;RO=1248;RPL=0;RPP=146.327;RPPR=2713.01;RPR=66;RUN=1;SAF=66;SAP=146.327;SAR=0;SRF=1248;SRP=2713.01;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:154:150,4:150:5857:4:162:0,-31.3917,-512.021 0/0:208:206,2:206:7904:2:82:0,-54.8346,-703.271 0/0:164:159,5:159:6066:5:202:0,-30.8074,-527.258 0/0:369:360,9:360:13951:9:355:0,-78.7703,-1222.41 0/1:239:211,28:211:8164:28:1108:-28.057,0,-662.475 0/1:180:162,18:162:6311:18:702:-9.31824,0,-513.635 dDocent_Contig_4488 30 . C T 1513.31 . AB=0.123606;ABP=1327.08;AC=1;AF=0.0833333;AN=12;AO=204;CIGAR=1X;DP=5877;DPB=5877;DPRA=1.33826;EPP=445.991;EPPR=12306.6;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999647;PAO=0;PQA=0;PQR=0;PRO=0;QA=8041;QR=224939;RO=5666;RPL=0;RPP=445.991;RPPR=12306.6;RPR=204;RUN=1;SAF=204;SAP=445.991;SAR=0;SRF=5666;SRP=12306.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:758:758,0:758:30094:0:0:0,-228.181,-2705.81 0/0:941:941,0:941:37372:0:0:0,-283.269,-3360.04 0/0:698:698,0:698:27763:0:0:0,-210.119,-2496.2 0/0:1124:1122,0:1122:44498:0:0:0,-337.756,-4000.46 0/1:1076:943,133:943:37275:133:5299:-152.854,0,-3027.49 0/0:1280:1204,71:1204:47937:71:2742:0,-137.201,-4062.88 dDocent_Contig_4490 36 . G A 70.57 . AB=0.2;ABP=18.6449;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=248;DPB=248;DPRA=0.725275;EPP=13.8677;EPPR=530.678;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=0.2;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=199;QR=9557;RO=243;RPL=0;RPP=13.8677;RPPR=530.678;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=243;SRP=530.678;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:1034:0:0:0,-7.82678,-93.3532 0/0:33:33,0:33:1309:0:0:0,-9.93399,-118.082 0/0:46:45,1:45:1753:1:41:0,-9.75281,-153.908 0/1:20:16,4:16:609:4:158:-8.57988,0,-49.1162 0/0:69:69,0:69:2707:0:0:0,-20.7711,-243.764 0/0:54:54,0:54:2145:0:0:0,-16.2556,-193.237 dDocent_Contig_4491 119 . T C 69.8328 . AB=0.122951;ABP=153.661;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X;DP=339;DPB=339;DPRA=1.30319;EPP=50.7827;EPPR=691.367;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.909091;PAIREDR=0.886435;PAO=0;PQA=0;PQR=0;PRO=0;QA=757;QR=10978;RO=317;RPL=0;RPP=50.7827;RPPR=691.367;RPR=22;RUN=1;SAF=0;SAP=50.7827;SAR=22;SRF=0;SRP=691.367;SRR=317;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:43:43,0:43:1495:0:0:0,-12.9443,-134.843 0/1:77:68,9:68:2297:9:304:-4.50878,0,-183.804 0/0:67:64,3:64:2223:3:103:0,-10.559,-190.725 0/0:56:52,4:52:1803:4:140:0,-3.91275,-149.603 0/1:45:39,6:39:1359:6:210:-5.69611,0,-109.06 0/0:51:51,0:51:1801:0:0:0,-15.3525,-162.372 dDocent_Contig_4493 18 . A G 12132.9 . AB=0.705455;ABP=204.665;AC=3;AF=0.25;AN=12;AO=388;CIGAR=1X;DP=775;DPB=775;DPRA=2.44444;EPP=845.542;EPPR=843.37;GTI=0;LEN=1;MEANALT=1;MQM=59.8144;MQMR=59.2326;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.891473;PAO=0;PQA=0;PQR=0;PRO=0;QA=15384;QR=15293;RO=387;RPL=0;RPP=845.542;RPPR=843.37;RPR=388;RUN=1;SAF=388;SAP=845.542;SAR=0;SRF=387;SRP=843.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:67:67,0:67:2645:0:0:0,-20.169,-238.145 0/0:87:87,0:87:3466:0:0:0,-26.1896,-311.779 0/0:71:71,0:71:2808:0:0:0,-21.3731,-252.483 0/1:112:87,25:87:3439:25:1007:-57.2092,0,-275.589 0/1:184:34,150:34:1331:150:5896:-475.059,0,-64.6287 0/1:254:41,213:41:1604:213:8481:-686.247,0,-65.6507 dDocent_Contig_4494 187 . C T 2301.72 . AB=0.634146;ABP=22.2358;AC=3;AF=0.25;AN=12;AO=78;CIGAR=1X;DP=226;DPB=226;DPRA=1.19417;EPP=172.385;EPPR=324.388;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3017;QR=5517;RO=148;RPL=78;RPP=172.385;RPPR=324.388;RPR=0;RUN=1;SAF=0;SAP=172.385;SAR=78;SRF=0;SRP=324.388;SRR=148;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:39,0:39:1468:0:0:0,-11.7402,-132.375 0/0:23:23,0:23:879:0:0:0,-6.92369,-79.4176 0/1:36:23,13:23:880:13:506:-35.0473,0,-68.6699 0/0:41:41,0:41:1495:0:0:0,-12.3422,-134.793 0/1:56:7,49:7:250:49:1897:-154.094,0,-5.98014 0/1:31:15,16:15:545:16:614:-46.2526,0,-40.0405 dDocent_Contig_4495 77 . T C 97.4704 . AB=0.254902;ABP=29.6215;AC=1;AF=0.0833333;AN=12;AO=35;CIGAR=1X;DP=360;DPB=360;DPRA=1.18462;EPP=79.0118;EPPR=708.739;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.885714;PAIREDR=0.818462;PAO=0;PQA=0;PQR=0;PRO=0;QA=837;QR=11079;RO=325;RPL=35;RPP=79.0118;RPPR=708.739;RPR=0;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=325;SRP=708.739;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:51:38,13:38:1313:13:290:-10.9688,0,-103.12 0/0:59:51,8:51:1718:8:186:0,-0.789254,-137.936 0/0:69:68,1:68:2327:1:29:0,-17.8714,-206.798 0/0:65:57,8:57:1924:8:190:0,-2.23086,-156.102 0/0:52:52,0:52:1784:0:0:0,-15.6536,-160.846 0/0:64:59,5:59:2013:5:142:0,-6.20409,-168.387 dDocent_Contig_4496 14 . G C 185.764 . AB=0.0915119;ABP=1095.82;AC=1;AF=0.0833333;AN=12;AO=78;CIGAR=1X;DP=4175;DPB=4175;DPRA=1.20827;EPP=172.385;EPPR=8890.85;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999511;PAO=0;PQA=0;PQR=0;PRO=0;QA=3107;QR=162590;RO=4093;RPL=0;RPP=172.385;RPPR=8890.85;RPR=78;RUN=1;SAF=78;SAP=172.385;SAR=0;SRF=4093;SRP=8890.85;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:548:548,0:548:21665:0:0:0,-164.964,-1948.08 0/0:696:695,1:695:27663:1:41:0,-205.422,-2483.11 0/0:663:662,1:662:26365:1:41:0,-195.488,-2366.43 0/0:674:671,0:671:26621:0:0:0,-201.991,-2393.17 0/0:840:832,7:832:33102:7:281:0,-227.31,-2950.49 0/1:754:685,69:685:27174:69:2744:-20.0993,0,-2216.32 dDocent_Contig_4497 15 . G C 23518.6 . AB=0.353355;ABP=453.914;AC=6;AF=0.5;AN=12;AO=853;CIGAR=1M2D1X;DP=2414;DPB=1987.5;DPRA=0;EPP=1855.28;EPPR=3381.82;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=59.9826;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.999357;PAO=0;PQA=0;PQR=0;PRO=0;QA=34346;QR=62050;RO=1556;RPL=0;RPP=1855.28;RPPR=3381.82;RPR=853;RUN=1;SAF=853;SAP=1855.28;SAR=0;SRF=1556;SRP=3381.82;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:537:338,198:338:13499:198:7952:-553.456,0,-1052.17 0|1:533:372,160:372:14856:160:6494:-423.632,0,-1175.42 0|1:502:289,213:289:11543:213:8592:-621.613,0,-886.973 0|1:529:310,217:310:12300:217:8692:-622.737,0,-947.053 0|1:113:101,12:101:4014:12:478:-9.35151,0,-327.247 0|1:200:146,53:146:5838:53:2138:-132.292,0,-464.927 dDocent_Contig_4498 7 . A G 525.453 . AB=0.157895;ABP=369.989;AC=1;AF=0.0833333;AN=12;AO=150;CIGAR=1X;DP=2635;DPB=2635;DPRA=0;EPP=328.731;EPPR=5375.23;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4833;QR=94386;RO=2474;RPL=0;RPP=328.731;RPPR=5375.23;RPR=150;RUN=1;SAF=150;SAP=328.731;SAR=0;SRF=2474;SRP=5375.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:384:371,11:371:14197:11:364:0,-82.0639,-1244.05 0/0:431:418,10:418:15950:10:290:0,-102.616,-1408.4 0/0:530:487,42:487:18602:42:1450:0,-28.5924,-1542.46 0/0:397:385,10:385:14634:10:311:0,-90.762,-1288.14 0/0:532:512,20:512:19528:20:621:0,-103.976,-1700.33 0/1:361:301,57:301:11475:57:1797:-54.0682,0,-924.441 dDocent_Contig_4499 11 . T C 4369.82 . AB=0.312849;ABP=166.38;AC=3;AF=0.25;AN=12;AO=172;CIGAR=1X;DP=941;DPB=941;DPRA=0.770103;EPP=376.504;EPPR=1672.87;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994798;PAO=0;PQA=0;PQR=0;PRO=0;QA=6853;QR=30877;RO=769;RPL=0;RPP=376.504;RPPR=1672.87;RPR=172;RUN=1;SAF=172;SAP=376.504;SAR=0;SRF=769;SRP=1672.87;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:95:93,2:93:3759:2:81:0,-20.9121,-330.612 0/1:121:64,57:64:2578:57:2250:-166.245,0,-195.71 0/1:249:163,86:163:6492:86:3463:-236.744,0,-509.053 0/1:167:142,25:142:5677:25:991:-39.2157,0,-460.451 0/0:194:194,0:194:7839:0:0:0,-58.3998,-705.053 0/0:115:113,2:113:4532:2:68:0,-28.1638,-401.334 dDocent_Contig_4500 13 . T C 200.954 . AB=0.151163;ABP=93.9091;AC=1;AF=0.0833333;AN=12;AO=39;CIGAR=1X;DP=828;DPB=828;DPRA=0.926531;EPP=87.6977;EPPR=1698.97;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992395;PAO=0;PQA=0;PQR=0;PRO=0;QA=1565;QR=31610;RO=789;RPL=0;RPP=87.6977;RPPR=1716.3;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=787;SRP=1698.97;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:85:80,5:80:3214:5:205:0,-6.75254,-270.482 0/1:86:73,13:73:2881:13:524:-21.6183,0,-233.502 0/0:254:238,16:238:9588:16:644:0,-18.1703,-803.999 0/0:108:104,4:104:4186:4:159:0,-17.8204,-362 0/0:147:147,0:147:5914:0:0:0,-44.2514,-532.03 0/0:148:147,1:147:5827:1:33:0,-41.2533,-520.945 dDocent_Contig_4501 17 . T G 5506.54 . AB=0.244604;ABP=554.267;AC=5;AF=0.416667;AN=12;AO=244;CIGAR=1X;DP=1153;DPB=1153;DPRA=0;EPP=532.85;EPPR=1976.88;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9706;QR=36263;RO=909;RPL=0;RPP=532.85;RPPR=1976.88;RPR=244;RUN=1;SAF=244;SAP=532.85;SAR=0;SRF=909;SRP=1976.88;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:155:118,37:118:4726:37:1467:-85.6172,0,-378.583 0/1:176:133,43:133:5266:43:1705:-100.693,0,-420.811 0/1:271:177,94:177:7071:94:3753:-256.2,0,-554.476 0/1:208:167,41:167:6693:41:1616:-83.0589,0,-539.439 0/0:180:174,6:174:6982:6:242:0,-32.0284,-605.889 0/1:163:140,23:140:5525:23:923:-34.3067,0,-448.012 dDocent_Contig_4502 34 . G A 122.345 . AB=0.110294;ABP=182.412;AC=1;AF=0.0833333;AN=12;AO=24;CIGAR=1X;DP=533;DPB=533;DPRA=1.58203;EPP=55.1256;EPPR=1099.62;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.97053;PAO=0;PQA=0;PQR=0;PRO=0;QA=965;QR=20175;RO=509;RPL=0;RPP=55.1256;RPPR=1090.99;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=508;SRP=1099.62;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:90:85,5:85:3368:5:198:0,-8.89769,-284.974 0/1:136:121,15:121:4755:15:604:-13.7574,0,-386.918 0/0:53:52,1:52:2066:1:41:0,-11.86,-182.028 0/0:126:123,3:123:4915:3:122:0,-26.5573,-430.856 0/0:60:60,0:60:2354:0:0:0,-18.0618,-212.002 0/0:68:68,0:68:2717:0:0:0,-20.47,-244.648 dDocent_Contig_4503 98 . N T 265.527 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=8;CIGAR=2X;DP=8;DPB=16;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0;PAO=10;PQA=255;PQR=0;PRO=0;QA=281;QR=0;RO=0;RPL=8;RPP=20.3821;RPPR=0;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:1:0,1:0:0:1:35:-3.17125,-0.30103,0 .:.:.:.:.:.:.:. 1|1:3:0,3:0:0:3:105:-9.79616,-0.90309,0 1|1:2:0,2:0:0:2:71:-6.40119,-0.60206,0 .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:70:-6.48411,-0.60206,0 dDocent_Contig_4504 1 . N G 571.962 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=15;CIGAR=1X;DP=15;DPB=15;DPRA=0;EPP=35.5824;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=59.8;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=606;QR=0;RO=0;RPL=0;RPP=35.5824;RPPR=0;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:122:-11.3685,-0.90309,0 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 1/1:1:0,1:0:0:1:40:-3.99568,-0.30103,0 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 1/1:8:0,8:0:0:8:321:-29.2576,-2.40824,0 dDocent_Contig_4505 134 . C A 660.704 . AB=0.252033;ABP=68.7018;AC=4;AF=0.333333;AN=12;AO=31;CIGAR=1X;DP=167;DPB=167;DPRA=1.39773;EPP=70.3259;EPPR=296.159;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=58.2074;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.948148;PAO=0;PQA=0;PQR=0;PRO=0;QA=1207;QR=5184;RO=135;RPL=0;RPP=70.3259;RPPR=296.159;RPR=31;RUN=1;SAF=0;SAP=70.3259;SAR=31;SRF=0;SRP=296.159;SRR=135;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:19,7:19:707:7:268:-16.6554,0,-56.1123 0/0:28:28,0:28:1088:0:0:0,-8.42884,-98.2099 0/1:41:24,17:24:919:17:671:-48.374,0,-61.787 0/0:16:16,0:16:625:0:0:0,-4.81648,-55.2955 0/1:37:31,5:31:1191:5:190:-6.22923,0,-96.1431 0/1:19:17,2:17:654:2:78:-1.68373,0,-53.4696 dDocent_Contig_4506 98 . N A 12169.1 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=400;CIGAR=2X;DP=401;DPB=404.5;DPRA=0;EPP=871.599;EPPR=0;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=2;PQA=44;PQR=0;PRO=0;QA=13518;QR=0;RO=0;RPL=400;RPP=871.599;RPPR=0;RPR=0;RUN=1;SAF=400;SAP=871.599;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:209:0,208:0:0:208:7043:-633.722,-62.6142,0 1|1:192:0,192:0:0:192:6475:-582.891,-57.7978,0 dDocent_Contig_4507 12 . A T 853.704 . AB=0.173745;ABP=242.468;AC=1;AF=0.0833333;AN=12;AO=65;CIGAR=1X5M;DP=1302;DPB=1301.5;DPRA=1.16071;EPP=144.156;EPPR=2561;GTI=0;LEN=1;MEANALT=4.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.591681;PAO=0;PQA=0;PQR=0;PRO=0;QA=2610;QR=46285;RO=1178;RPL=0;RPP=144.156;RPPR=2561;RPR=65;RUN=1;SAF=65;SAP=144.156;SAR=0;SRF=1178;SRP=2561;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:226:215,0,0:215:8448:0,0:0,0:0,-64.7214,-759.592,-64.7214,-759.592,-759.592 0|0:286:280,0,4:280:10984:0,4:0,163:0,-84.2884,-987.587,-70.7696,-974.14,-972.936 0|0:216:196,0,13:196:7707:0,13:0,528:0,-59.0019,-692.924,-15.4389,-649.376,-645.462 0|1:259:203,4,45:203:7959:4,45:157,1797:-86.8933,-135.09,-788.361,0,-641.568,-640.934 0|0:166:149,7,0:149:5860:7,0:278,0:0,-21.9383,-501.907,-44.8535,-504.014,-526.902 0|0:149:135,8,3:135:5327:8,3:320,122:0,-14.2729,-450.17,-30.5728,-442.515,-467.972 dDocent_Contig_4508 98 . N T 148.001 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=9;CIGAR=1X;DP=10;DPB=10;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0.888889;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=150;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:27:-2.69978,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:4:0,3:0:0:3:36:-3.29246,-0.90309,0 1/1:2:0,2:0:0:2:51:-4.84444,-0.60206,0 1/1:3:0,3:0:0:3:36:-3.35996,-0.90309,0 ./.:.:.:.:.:.:.:. dDocent_Contig_4509 18 . G A 167870 . AB=0.869886;ABP=5318.57;AC=7;AF=0.583333;AN=12;AO=5116;CIGAR=1X;DP=5753;DPB=5753;DPRA=0;EPP=11112.3;EPPR=1381.9;GTI=0;LEN=1;MEANALT=1.33333;MQM=59.9951;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998632;PAIREDR=0.99685;PAO=0;PQA=0;PQR=0;PRO=0;QA=204005;QR=25272;RO=635;RPL=0;RPP=11112.3;RPPR=1381.9;RPR=5116;RUN=1;SAF=5116;SAP=11112.3;SAR=0;SRF=635;SRP=1381.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:950:166,784:166:6585:784:31280:-2526.41,0,-306.402 0/1:908:89,819:89:3535:819:32637:-2661.02,0,-44.8424 0/1:641:110,530:110:4374:530:21059:-1700.68,0,-200.754 0/1:1003:114,889:114:4535:889:35402:-2880.96,0,-106.145 0/1:971:101,869:101:4034:869:34743:-2831.27,0,-70.6655 1/1:1280:55,1225:55:2209:1225:48884:-4195.87,-186.345,0 dDocent_Contig_4510 12 . A T 19047.9 . AB=0.436864;ABP=60.8656;AC=2;AF=0.166667;AN=12;AO=837;CIGAR=1X;DP=4295;DPB=4295;DPRA=0;EPP=1820.53;EPPR=7503.28;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99971;PAO=0;PQA=0;PQR=0;PRO=0;QA=30656;QR=132668;RO=3454;RPL=0;RPP=1820.53;RPPR=7503.28;RPR=837;RUN=1;SAF=837;SAP=1820.53;SAR=0;SRF=3454;SRP=7503.28;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:601:576,23:576:22058:23:843:0,-104.32,-1907.56 0/0:690:658,31:658:25358:31:1080:0,-110.004,-2182.92 0/0:629:591,38:591:22833:38:1386:0,-64.3305,-1928.32 0/0:704:689,15:689:26514:15:550:0,-162.096,-2334.54 0/1:830:508,322:508:19424:322:11842:-815.558,0,-1497.06 0/1:841:432,408:432:16481:408:14955:-1092.45,0,-1229.34 dDocent_Contig_4511 77 . A G 2228.68 . AB=0.146974;ABP=1129.89;AC=2;AF=0.166667;AN=12;AO=153;CIGAR=2X;DP=2664;DPB=2664;DPRA=1.28281;EPP=335.246;EPPR=5440.38;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.980032;PAO=0;PQA=0;PQR=0;PRO=0;QA=5985;QR=97437;RO=2504;RPL=153;RPP=335.246;RPPR=5440.38;RPR=0;RUN=1;SAF=153;SAP=335.246;SAR=0;SRF=2504;SRP=5440.38;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:362:361,0:361:13731:0:0:0,-108.672,-1235.07 0|0:459:459,0:459:17491:0:0:0,-138.173,-1573.35 0|0:335:334,0:334:13154:0:0:0,-100.544,-1182.75 0|0:467:465,0:465:18274:0:0:0,-139.979,-1643.09 0|1:523:436,84:436:17123:84:3259:-136.55,0,-1382.96 0|1:518:449,69:449:17664:69:2726:-89.5402,0,-1432.51 dDocent_Contig_4512 17 . A T 19799.9 . AB=0.268642;ABP=1430.79;AC=4;AF=0.333333;AN=12;AO=870;CIGAR=1X;DP=4577;DPB=4577;DPRA=0;EPP=1892.19;EPPR=8052.66;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=34151;QR=146555;RO=3707;RPL=0;RPP=1892.19;RPPR=8052.66;RPR=870;RUN=1;SAF=870;SAP=1892.19;SAR=0;SRF=3707;SRP=8052.66;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:684:453,231:453:17889:231:9014:-604.919,0,-1402.77 0/1:814:553,261:553:21845:261:10229:-674.971,0,-1719.27 0/1:712:525,187:525:20833:187:7396:-450.963,0,-1658.93 0/1:861:715,146:715:28283:146:5730:-256.361,0,-2283.88 0/0:803:759,44:759:30072:44:1746:0,-84.3604,-2546.54 0/0:703:702,1:702:27633:1:36:0,-208.026,-2481.08 dDocent_Contig_4513 22 . A T 35.0462 . AB=0.157895;ABP=22.325;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=131;DPB=131;DPRA=0.848214;EPP=9.52472;EPPR=280.959;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=39.1875;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.984375;PAO=0;PQA=0;PQR=0;PRO=0;QA=112;QR=5091;RO=128;RPL=0;RPP=9.52472;RPPR=280.959;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=128;SRP=280.959;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:16,3:16:642:3:112:-4.72633,0,-45.8026 0/0:31:31,0:31:1234:0:0:0,-9.33193,-102.899 0/0:29:29,0:29:1146:0:0:0,-8.72987,-95.8802 0/0:15:15,0:15:603:0:0:0,-4.51545,-44.9585 0/0:12:12,0:12:462:0:0:0,-3.61236,-38.7363 0/0:25:25,0:25:1004:0:0:0,-7.52575,-83.6079 dDocent_Contig_4514 25 . C T 105.985 . AB=0.227273;ABP=17.2236;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=167;DPB=167;DPRA=0.929825;EPP=16.0391;EPPR=352.617;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.695652;PAO=0;PQA=0;PQR=0;PRO=0;QA=242;QR=6434;RO=161;RPL=0;RPP=16.0391;RPPR=352.617;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=161;SRP=352.617;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:957:0:0:0,-7.22472,-86.4323 0/0:44:44,0:44:1758:0:0:0,-13.2453,-158.438 0/1:22:17,5:17:674:5:204:-12.1214,0,-54.3608 0/0:31:30,1:30:1198:1:38:0,-5.53466,-104.297 0/0:12:12,0:12:481:0:0:0,-3.61236,-43.6416 0/0:34:34,0:34:1366:0:0:0,-10.235,-123.197 dDocent_Contig_4515 36 . C A 181.962 . AB=0.116022;ABP=234.806;AC=1;AF=0.0833333;AN=12;AO=21;CIGAR=1X;DP=1003;DPB=1003;DPRA=1.10097;EPP=48.6112;EPPR=2135.4;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=821;QR=39139;RO=982;RPL=0;RPP=48.6112;RPPR=2135.4;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=982;SRP=2135.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:106:106,0:106:4175:0:0:0,-31.9092,-375.717 0/0:147:147,0:147:5857:0:0:0,-44.2514,-526.911 0/0:255:255,0:255:10168:0:0:0,-76.7626,-914.455 0/1:181:160,21:160:6374:21:821:-19.719,0,-518.919 0/0:143:143,0:143:5769:0:0:0,-43.0473,-518.991 0/0:171:171,0:171:6796:0:0:0,-51.4761,-611.333 dDocent_Contig_4517 22 . T C 3640.85 . AB=0.194111;ABP=748.275;AC=2;AF=0.166667;AN=12;AO=192;CIGAR=5M1X;DP=3227;DPB=3187;DPRA=0.592417;EPP=419.933;EPPR=6326.34;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7690;QR=114105;RO=2912;RPL=0;RPP=419.933;RPPR=6326.34;RPR=192;RUN=1;SAF=192;SAP=419.933;SAR=0;SRF=2912;SRP=6326.34;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:421:409,0,12:409:15978:0,12:0,470:0,-123.121,-1436.61,-84.0868,-1397.96,-1394.35 0|1:429:352,0,75:352:13753:0,75:0,2977:-139.252,-245.215,-1375.82,0,-1130.78,-1108.2 0|0:412:408,0,2:408:16077:0,2:0,82:0,-122.82,-1445.44,-116.052,-1438.67,-1438.07 0|1:488:382,0,103:382:14956:0,103:0,4161:-228.055,-343.048,-1572.77,0,-1229.73,-1198.72 0|0:687:653,13,0:653:25562:13,0:503,0:0,-155.265,-2253.09,-196.573,-2257,-2298.31 0|0:790:708,65,0:708:27779:65,0:2497,0:0,-8.16217,-2273.12,-213.129,-2292.69,-2497.64 dDocent_Contig_4518 195 . T A 119.731 . AB=0.333333;ABP=6.62942;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=74;DPB=74;DPRA=1.27119;EPP=13.8677;EPPR=152.842;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=196;QR=2732;RO=69;RPL=5;RPP=13.8677;RPPR=152.842;RPR=0;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=152.842;SRR=69;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:368:0:0:0,-2.70927,-33.4854 0/0:17:17,0:17:672:0:0:0,-5.11751,-60.8104 0/0:18:18,0:18:728:0:0:0,-5.41854,-65.8448 0/0:9:9,0:9:353:0:0:0,-2.70927,-32.1285 0/1:15:10,5:10:403:5:196:-13.4959,0,-32.1144 0/0:6:6,0:6:208:0:0:0,-1.80618,-19.0478 dDocent_Contig_4519 11 . C T 93.3629 . AB=0.145455;ABP=63.0614;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=434;DPB=434;DPRA=0.290237;EPP=20.3821;EPPR=925.886;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=315;QR=16959;RO=425;RPL=0;RPP=20.3821;RPPR=925.886;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=425;SRP=925.886;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:11:9,2:9:352:2:81:-4.3744,0,-28.723 0/0:46:46,0:46:1823:0:0:0,-13.8474,-164.283 0/0:54:53,0:53:2141:0:0:0,-15.9546,-192.483 0/1:44:38,6:38:1495:6:234:-8.18343,0,-121.55 0/0:153:153,0:153:6086:0:0:0,-46.0576,-547.506 0/0:126:126,0:126:5062:0:0:0,-37.9298,-455.441 dDocent_Contig_4520 98 . N T 262.433 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=8;CIGAR=2X4I2X1I5X;DP=8;DPB=46.8889;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0;PAO=76;PQA=2458;PQR=0;PRO=0;QA=285;QR=0;RO=0;RPL=8;RPP=20.3821;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=20.3821;SAR=8;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:2:0,2:0:0:2:63:-5.7907,-0.60206,0 1|1:4:0,4:0:0:4:148:-13.3169,-1.20412,0 .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:74:-6.65774,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_4521 72 . T G 232.081 . AB=0.208333;ABP=56.2114;AC=1;AF=0.0833333;AN=12;AO=22;CIGAR=1X;DP=349;DPB=349;DPRA=1.40488;EPP=50.7827;EPPR=713.082;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=746;QR=11125;RO=327;RPL=22;RPP=50.7827;RPPR=713.082;RPR=0;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=327;SRP=713.082;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:39,0:39:1277:0:0:0,-11.7402,-115.22 0/0:20:20,0:20:652:0:0:0,-6.0206,-58.987 0/0:71:71,0:71:2457:0:0:0,-21.3731,-221.38 0/0:75:75,0:75:2581:0:0:0,-22.5772,-232.535 0/0:72:65,7:65:2212:7:234:0,-0.286473,-177.95 0/1:72:57,15:57:1946:15:512:-24.7306,0,-153.733 dDocent_Contig_4522 10 . C A 213.702 . AB=0.0899772;ABP=1285.12;AC=2;AF=0.166667;AN=12;AO=143;CIGAR=1X;DP=2584;DPB=2584;DPRA=1.98059;EPP=313.531;EPPR=5299.23;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=59.9996;NS=6;NUMALT=1;ODDS=0;PAIRED=0.965035;PAIREDR=0.99877;PAO=0;PQA=0;PQR=0;PRO=0;QA=5753;QR=97766;RO=2439;RPL=0;RPP=313.531;RPPR=5299.23;RPR=143;RUN=1;SAF=143;SAP=313.531;SAR=0;SRF=2439;SRP=5299.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:242:241,1:241:9597:1:40:0,-68.8536,-859.134 0/0:237:237,0:237:9490:0:0:0,-71.3441,-853.507 0/1:294:267,27:267:10706:27:1096:-10.4216,0,-874.298 0/0:431:410,21:410:16438:21:810:0,-56.5424,-1404.87 0/1:584:531,52:531:21293:52:2110:-14.1704,0,-1738.61 0/0:796:753,42:753:30242:42:1697:0,-86.7304,-2566 dDocent_Contig_4524 46 . G A 11879.9 . AB=0.589869;ABP=45.943;AC=7;AF=0.583333;AN=12;AO=361;CIGAR=1X3M;DP=612;DPB=612;DPRA=0;EPP=786.912;EPPR=302.673;GTI=0;LEN=1;MEANALT=3.66667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=14279;QR=5324;RO=138;RPL=0;RPP=786.912;RPPR=302.673;RPR=361;RUN=1;SAF=361;SAP=786.912;SAR=0;SRF=138;SRP=302.673;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:67:23,11,1,32:23:859:11,1,32:419,40,1269:-97.5406,-70.1059,-137.099,-101.169,-137.115,-171.176,0,-35.944,-67.0126,-60.6754 0|1:68:24,3,5,35:24:935:3,5,35:120,198,1370:-105.408,-102.747,-178.684,-96.3353,-163.289,-171.67,0,-66.9489,-60.5372,-66.2989 0|1:154:26,11,8,108:26:1004:11,8,108:439,319,4296:-345.857,-317.528,-396.661,-327.413,-373.702,-407.45,0,-46.2812,-56.1676,-49.9283 0|1:60:17,13,1,29:17:662:13,1,29:515,40,1156:-90.0801,-52.8096,-103.299,-91.9025,-103.918,-146.005,0,-12.0112,-51.1073,-45.6727 1|1:130:27,47,0,54:27:1046:47,0,54:1844,0,2142:-233.918,-90.4043,-162.175,-242.046,-176.324,-327.967,-65.7269,0,-151.648,-135.392 0|1:133:21,5,3,103:21:818:5,3,103:199,122,4046:-326.404,-316.34,-382.058,-322.662,-373.5,-388.983,0,-50.8286,-57.1508,-36.2094 dDocent_Contig_4525 12 . T C 65570.1 . AB=0.389149;ABP=640.408;AC=6;AF=0.5;AN=12;AO=2324;CIGAR=1X;DP=5972;DPB=5972;DPRA=0;EPP=5049.51;EPPR=7920.2;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998629;PAO=0;PQA=0;PQR=0;PRO=0;QA=93040;QR=145178;RO=3646;RPL=0;RPP=5049.51;RPPR=7920.2;RPR=2324;RUN=1;SAF=2324;SAP=5049.51;SAR=0;SRF=3646;SRP=7920.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:877:583,294:583:23176:294:11799:-797.049,0,-1819.87 0/1:1000:734,266:734:29106:266:10644:-656.22,0,-2315.94 0/1:676:488,187:488:19506:187:7467:-468.036,0,-1550.3 0/1:878:712,165:712:28358:165:6560:-325.733,0,-2285.32 0/1:1373:515,858:515:20561:858:34454:-2684.28,0,-1435.44 0/1:1168:614,554:614:24471:554:22116:-1636.91,0,-1848.66 dDocent_Contig_4526 69 . G A 8489.16 . AB=0.174621;ABP=2430.72;AC=6;AF=0.5;AN=12;AO=461;CIGAR=1M1X;DP=2640;DPB=2770.5;DPRA=0;EPP=1004.06;EPPR=4274.3;GTI=0;LEN=1;MEANALT=4.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.22045e-16;PAIRED=0.629067;PAIREDR=0.609049;PAO=0;PQA=0;PQR=0;PRO=0;QA=17693;QR=76086;RO=1967;RPL=261;RPP=20.5375;RPPR=184.086;RPR=200;RUN=1;SAF=261;SAP=20.5375;SAR=200;SRF=1186;SRP=184.086;SRR=781;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:481:362,31,70:362:13868:31,70:1141,2653:-108.543,-124.231,-1252.95,0,-1044.78,-1116.99 0|1:591:397,31,146:397:15256:31,146:1159,5539:-334.658,-359.26,-1602.23,0,-1157.4,-1208.36 0|1:243:177,11,47:177:7029:11,47:416,1825:-96.665,-115.85,-691.164,0,-544.537,-564.486 0|1:475:353,22,87:353:13545:22,87:821,3397:-172.985,-212.042,-1317.06,0,-1044.45,-1085.47 0|1:383:287,25,60:287:11163:25,60:929,2302:-102.561,-112.931,-1022.72,0,-841.296,-899.26 0|1:467:391,22,51:391:15225:22,51:826,1977:-44.7261,-94.7683,-1339.34,0,-1183.55,-1235.86 dDocent_Contig_4527 11 . A G 315.038 . AB=0.108571;ABP=468.797;AC=1;AF=0.0833333;AN=12;AO=162;CIGAR=1X;DP=3421;DPB=3421;DPRA=0;EPP=354.789;EPPR=7079.84;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.993827;PAIREDR=0.995704;PAO=0;PQA=0;PQR=0;PRO=0;QA=6483;QR=129878;RO=3259;RPL=0;RPP=354.789;RPPR=7079.84;RPR=162;RUN=1;SAF=162;SAP=354.789;SAR=0;SRF=3259;SRP=7079.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:555:518,37:518:20570:37:1494:0,-32.3726,-1714.89 0/0:520:519,1:519:20744:1:41:0,-152.441,-1861.1 0/1:350:312,38:312:12496:38:1535:-33.0267,0,-1018.36 0/0:677:670,7:670:26583:7:272:0,-178.952,-2365.34 0/0:647:611,36:611:24404:36:1434:0,-65.4611,-2064.93 0/0:672:629,43:629:25081:43:1707:0,-48.4467,-2101.24 dDocent_Contig_4528 209 . G A 13085.3 . AB=0.793561;ABP=398.235;AC=6;AF=0.5;AN=12;AO=419;CIGAR=1X;DP=528;DPB=528;DPRA=0;EPP=912.857;EPPR=222.648;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990826;PAO=0;PQA=0;PQR=0;PRO=0;QA=16422;QR=4260;RO=109;RPL=0;RPP=912.857;RPPR=231.095;RPR=419;RUN=1;SAF=0;SAP=912.857;SAR=419;SRF=1;SRP=231.095;SRR=108;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:96:13,83:13:513:83:3242:-262.956,0,-17.6154 0/1:136:12,124:12:487:124:4850:-395.467,0,-3.24101 0/1:133:27,106:27:1062:106:4179:-336.056,0,-55.8294 0/1:112:23,89:23:850:89:3489:-280.331,0,-43.0674 0/1:33:22,11:22:865:11:432:-29.2948,0,-68.2202 0/1:18:12,6:12:483:6:230:-15.6408,0,-38.403 dDocent_Contig_4529 29 . C T 4419.88 . AB=0.192042;ABP=955.272;AC=4;AF=0.333333;AN=12;AO=222;CIGAR=1X;DP=2712;DPB=2712;DPRA=0.371465;EPP=485.077;EPPR=5403.46;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998392;PAO=0;PQA=0;PQR=0;PRO=0;QA=8848;QR=99261;RO=2487;RPL=0;RPP=485.077;RPPR=5403.46;RPR=222;RUN=1;SAF=222;SAP=485.077;SAR=0;SRF=2487;SRP=5403.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:223:183,40:183:7180:40:1605:-77.5548,0,-578.746 0/1:318:274,44:274:10924:44:1755:-62.4388,0,-886.69 0/1:248:206,42:206:8238:42:1688:-77.4853,0,-666.291 0/1:367:269,96:269:10718:96:3800:-231.731,0,-853.63 0/0:766:766,0:766:30672:0:0:0,-230.589,-2757.67 0/0:790:789,0:789:31529:0:0:0,-237.513,-2834.63 dDocent_Contig_4530 64 . T G 7196.42 . AB=0.201912;ABP=1375.26;AC=2;AF=0.166667;AN=12;AO=386;CIGAR=1X;DP=4659;DPB=4659;DPRA=1.22683;EPP=841.199;EPPR=9277.37;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999532;PAO=0;PQA=0;PQR=0;PRO=0;QA=15050;QR=165903;RO=4271;RPL=386;RPP=841.199;RPPR=9277.37;RPR=0;RUN=1;SAF=386;SAP=841.199;SAR=0;SRF=4271;SRP=9277.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:575:575,0:575:21838:0:0:0,-173.092,-1964.25 0/0:774:774,0:774:29165:0:0:0,-232.997,-2623.18 0/0:765:752,12:752:29598:12:467:0,-187.851,-2618.86 0/0:767:751,15:751:29372:15:598:0,-176.783,-2586.83 0/1:814:733,81:733:28927:81:3172:-40.5286,0,-2355.92 0/1:964:686,278:686:27003:278:10813:-682.335,0,-2137.79 dDocent_Contig_4532 1 . N G 76.8682 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_4533 60 . C T 428.112 . AB=0.113333;ABP=587.397;AC=2;AF=0.166667;AN=12;AO=89;CIGAR=1X;DP=1268;DPB=1268;DPRA=0;EPP=196.271;EPPR=2561;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.94382;PAIREDR=0.98472;PAO=0;PQA=0;PQR=0;PRO=0;QA=3442;QR=46451;RO=1178;RPL=89;RPP=196.271;RPPR=2561;RPR=0;RUN=1;SAF=89;SAP=196.271;SAR=0;SRF=1178;SRP=2561;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:227:199,28:199:7866:28:1104:-31.3155,0,-639.201 0/1:223:200,23:200:7866:23:906:-14.7176,0,-640.414 0/0:155:148,7:148:5825:7:258:0,-23.0989,-500.491 0/0:249:232,16:232:9180:16:627:0,-17.9706,-768.917 0/0:179:171,8:171:6796:8:318:0,-24.8983,-582.362 0/0:235:228,7:228:8918:7:229:0,-49.8208,-781.199 dDocent_Contig_4534 6 . C A 128.614 . AB=0.15625;ABP=68.6973;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=269;DPB=269;DPRA=1.56098;EPP=24.725;EPPR=565.422;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.861004;PAO=0;PQA=0;PQR=0;PRO=0;QA=370;QR=10077;RO=259;RPL=0;RPP=24.725;RPPR=565.422;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=259;SRP=565.422;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:45:45,0:45:1751:0:0:0,-13.5463,-157.842 0/0:40:40,0:40:1555:0:0:0,-12.0412,-140.218 0/0:42:42,0:42:1638:0:0:0,-12.6433,-147.68 0/1:64:54,10:54:2106:10:370:-14.3843,0,-170.497 0/0:31:31,0:31:1199:0:0:0,-9.33193,-108.206 0/0:47:47,0:47:1828:0:0:0,-14.1484,-164.766 dDocent_Contig_4536 24 . A C 2240.13 . AB=0.28012;ABP=142.429;AC=5;AF=0.416667;AN=12;AO=93;CIGAR=1X;DP=361;DPB=361;DPRA=2.28966;EPP=204.957;EPPR=582.793;GTI=0;LEN=1;MEANALT=1.2;MQM=59.8817;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.978495;PAIREDR=0.940075;PAO=0;PQA=0;PQR=0;PRO=0;QA=3686;QR=10595;RO=267;RPL=0;RPP=204.957;RPPR=582.793;RPR=93;RUN=1;SAF=93;SAP=204.957;SAR=0;SRF=267;SRP=582.793;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:74:52,22:52:2092:22:877:-56.9637,0,-166.183 0/1:60:49,11:49:1953:11:429:-20.8963,0,-157.907 0/1:39:32,7:32:1269:7:279:-13.7408,0,-102.736 0/1:70:59,11:59:2276:11:423:-17.3375,0,-183.935 0/0:29:29,0:29:1161:0:0:0,-8.72987,-104.772 0/1:89:46,42:46:1844:42:1678:-124.297,0,-139.277 dDocent_Contig_4537 92 . G T 129.55 . AB=0.195652;ABP=40.0197;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=380;DPB=380;DPRA=0.688623;EPP=22.5536;EPPR=808.627;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.994609;PAO=0;PQA=0;PQR=0;PRO=0;QA=311;QR=12303;RO=371;RPL=9;RPP=22.5536;RPPR=808.627;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=371;SRP=808.627;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:40,0:40:1322:0:0:0,-12.0412,-119.273 0/0:74:74,0:74:2445:0:0:0,-22.2762,-220.311 0/1:46:37,9:37:1255:9:311:-14.4779,0,-99.4023 0/0:76:76,0:76:2526:0:0:0,-22.8783,-227.595 0/0:62:62,0:62:2075:0:0:0,-18.6639,-187.021 0/0:82:82,0:82:2680:0:0:0,-24.6845,-241.45 dDocent_Contig_4538 119 . G A 7692.69 . AB=0.451253;ABP=17.8295;AC=4;AF=0.333333;AN=12;AO=341;CIGAR=1X;DP=1215;DPB=1215;DPRA=0;EPP=743.482;EPPR=1898.71;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11602;QR=28868;RO=873;RPL=0;RPP=743.482;RPPR=1898.71;RPR=341;RUN=1;SAF=0;SAP=743.482;SAR=341;SRF=0;SRP=1898.71;SRR=873;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:144:83,61:83:2826:61:2083:-144.396,0,-211.241 0/1:194:124,70:124:4099:70:2387:-156.696,0,-310.721 0/1:189:73,116:73:2347:116:3954:-299.18,0,-154.588 0/1:191:114,77:114:3800:77:2594:-176.219,0,-284.719 0/0:203:201,1:201:6707:1:35:0,-57.5194,-600.4 0/0:294:278,16:278:9089:16:549:0,-38.7673,-768.327 dDocent_Contig_4539 107 . N T 100.496 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=101;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.64733,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_4540 8 . T C 6042.47 . AB=0.196429;ABP=1302.95;AC=2;AF=0.166667;AN=12;AO=356;CIGAR=1X;DP=3852;DPB=3852;DPRA=1.34837;EPP=776.054;EPPR=7583.62;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.994382;PAIREDR=0.999141;PAO=0;PQA=0;PQR=0;PRO=0;QA=13600;QR=133441;RO=3491;RPL=0;RPP=776.054;RPPR=7583.62;RPR=356;RUN=1;SAF=356;SAP=776.054;SAR=0;SRF=3491;SRP=7583.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:409:409,0:409:15611:0:0:0,-123.121,-1404.25 0/0:633:633,0:633:24139:0:0:0,-190.552,-2171.17 0/0:594:583,10:583:22320:10:387:0,-143.703,-1972.37 0/0:592:565,27:565:21530:27:1036:0,-84.6616,-1842.99 0/1:782:634,145:634:24362:145:5499:-260.05,0,-1956.33 0/1:842:667,174:667:25479:174:6678:-347.419,0,-2038.15 dDocent_Contig_4542 20 . G A 97114.5 . AB=0.573632;ABP=265.55;AC=6;AF=0.5;AN=12;AO=3198;CIGAR=1X;DP=5575;DPB=5575;DPRA=0;EPP=6947.38;EPPR=5164.6;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999062;PAIREDR=0.984013;PAO=0;PQA=0;PQR=0;PRO=0;QA=126793;QR=94224;RO=2377;RPL=0;RPP=6947.38;RPPR=5164.6;RPR=3198;RUN=1;SAF=3198;SAP=6947.38;SAR=0;SRF=2377;SRP=5164.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:898:470,428:470:18487:428:16900:-1249.39,0,-1392.05 0/1:1051:538,513:538:21363:513:20371:-1515.35,0,-1604.49 0/1:655:339,316:339:13465:316:12594:-935.372,0,-1013.67 0/1:1040:549,491:549:21769:491:19442:-1435.16,0,-1644.33 0/1:905:250,655:250:9929:655:25966:-2062.26,0,-620.557 0/1:1026:231,795:231:9211:795:31520:-2525.14,0,-519.579 dDocent_Contig_4543 32 . A G 3049.64 . AB=0.155071;ABP=1235.87;AC=1;AF=0.0833333;AN=12;AO=257;CIGAR=1X;DP=5592;DPB=5592;DPRA=0.865143;EPP=561.079;EPPR=11574.8;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999812;PAO=0;PQA=0;PQR=0;PRO=0;QA=10266;QR=212253;RO=5329;RPL=0;RPP=561.079;RPPR=11574.8;RPR=257;RUN=1;SAF=257;SAP=561.079;SAR=0;SRF=5329;SRP=11574.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:783:781,1:781:31104:1:24:0,-233.33,-2794.07 0/0:889:885,4:885:35163:4:164:0,-252.466,-3146.31 0/0:596:593,2:593:23642:2:82:0,-171.563,-2118.03 0/0:1050:1050,0:1050:41939:0:0:0,-316.081,-3770.53 0/0:1081:1015,65:1015:40444:65:2605:0,-90.7255,-3401.58 0/1:1193:1005,185:1005:39961:185:7391:-306.487,0,-3234.45 dDocent_Contig_4544 9 . T C 86520.9 . AB=0.564836;ABP=194.484;AC=6;AF=0.5;AN=12;AO=2962;CIGAR=1X;DP=5244;DPB=5244;DPRA=0;EPP=6434.91;EPPR=4951.8;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=113866;QR=87275;RO=2279;RPL=0;RPP=6434.91;RPPR=4951.8;RPR=2962;RUN=1;SAF=2962;SAP=6434.91;SAR=0;SRF=2279;SRP=4951.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:774:360,413:360:13789:413:15865:-1193.98,0,-1007.3 0/1:925:391,534:391:14974:534:20534:-1568.47,0,-1068.5 0/1:834:242,592:242:9282:592:22764:-1796.4,0,-584.015 0/1:902:351,551:351:13420:551:21170:-1632.58,0,-935.676 0/1:783:446,335:446:17058:335:12860:-921.342,0,-1298.87 0/1:1026:489,537:489:18752:537:20673:-1550.55,0,-1377.84 dDocent_Contig_4545 98 . N C 122.937 . AB=0;ABP=0;AC=6;AF=0.75;AN=8;AO=5;CIGAR=1X;DP=6;DPB=6;DPRA=1.66667;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=120;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:30:-2.99957,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:17:-1.69998,-0.30103,0 0/0:1:0,0:0:0:0:0:0,0,0 1/1:3:0,3:0:0:3:73:-6.81297,-0.90309,0 ./.:.:.:.:.:.:.:. dDocent_Contig_4546 159 . C T 48.361 . AB=0.108434;ABP=113.546;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=685;DPB=685;DPRA=0.689369;EPP=3.25157;EPPR=67.7819;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=341;QR=25642;RO=676;RPL=5;RPP=3.25157;RPPR=67.7819;RPR=4;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=1470.93;SRR=676;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:83:74,9:74:2831:9:341:-6.05794,0,-229.939 0/0:72:72,0:72:2777:0:0:0,-21.6742,-250.074 0/0:71:71,0:71:2693:0:0:0,-21.3731,-242.535 0/0:141:141,0:141:5324:0:0:0,-42.4452,-479.125 0/0:189:189,0:189:7109:0:0:0,-56.8947,-639.644 0/0:129:129,0:129:4908:0:0:0,-38.8329,-441.716 dDocent_Contig_4547 55 . T A 27449.8 . AB=0.0526316;ABP=894.8;AC=0;AF=0;AN=12;AO=27;CIGAR=1X3M1X;DP=2528;DPB=2528;DPRA=0;EPP=61.6401;EPPR=3266.73;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1028;QR=58403;RO=1503;RPL=27;RPP=61.6401;RPPR=3266.73;RPR=0;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=1503;SRP=3266.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:323:231,0,92:231:8922:0,92:0,3631:-229.61,-299.148,-1031.84,0,-733.079,-705.384 0|0:359:242,0,115:242:9386:0,115:0,4536:-300.586,-373.435,-1144.53,0,-771.334,-736.715 0|0:394:201,0,193:201:7937:0,193:0,7639:-568.56,-629.067,-1282.16,0,-653.489,-595.39 0|0:389:161,0,228:161:6234:0,228:0,8855:-679.416,-727.882,-1239.95,0,-512.457,-443.822 0|0:550:328,0,220:328:12658:0,220:0,8638:-611.943,-710.681,-1750.09,0,-1039.72,-973.489 0|0:513:340,27,146:340:13266:27,146:1028,5699:-366.09,-384.131,-1466.44,0,-1006.13,-1046.49 dDocent_Contig_4548 32 . G A 1204.91 . AB=0.211111;ABP=198.732;AC=1;AF=0.0833333;AN=12;AO=90;CIGAR=1X;DP=1343;DPB=1343;DPRA=0.859312;EPP=198.443;EPPR=2723.87;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.977778;PAIREDR=0.992019;PAO=0;PQA=0;PQR=0;PRO=0;QA=3580;QR=49358;RO=1253;RPL=0;RPP=198.443;RPPR=2723.87;RPR=90;RUN=1;SAF=90;SAP=198.443;SAR=0;SRF=1253;SRP=2723.87;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:174:163,11:163:6403:11:443:0,-12.1544,-535.819 0/1:270:213,57:213:8316:57:2257:-122.014,0,-666.723 0/0:118:109,9:109:4359:9:368:0,-2.03619,-358.772 0/0:291:291,0:291:11454:0:0:0,-87.5997,-1030.12 0/0:203:203,0:203:8009:0:0:0,-61.1091,-720.392 0/0:287:274,13:274:10817:13:512:0,-39.9748,-926.399 dDocent_Contig_4549 52 . G C 14891.4 . AB=0.35871;ABP=271.774;AC=6;AF=0.5;AN=12;AO=556;CIGAR=1X;DP=1550;DPB=1550;DPRA=0;EPP=1210.35;EPPR=2159.28;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=21853;QR=38574;RO=993;RPL=556;RPP=1210.35;RPPR=2159.28;RPR=0;RUN=1;SAF=556;SAP=1210.35;SAR=0;SRF=993;SRP=2159.28;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:229:171,58:171:6608:58:2292:-137.516,0,-525.59 0/1:256:137,119:137:5311:119:4676:-343.73,0,-400.837 0/1:307:216,91:216:8398:91:3584:-230.194,0,-663.036 0/1:282:147,135:147:5702:135:5258:-388.229,0,-428.179 0/1:202:156,46:156:6116:46:1820:-103.211,0,-489.466 0/1:274:166,107:166:6439:107:4223:-297.477,0,-496.735 dDocent_Contig_4550 19 . T A 25747.9 . AB=0.191264;ABP=1254;AC=6;AF=0.5;AN=12;AO=291;CIGAR=1X4M;DP=1554;DPB=1554;DPRA=0;EPP=634.909;EPPR=943.258;GTI=0;LEN=1;MEANALT=3.16667;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0.996564;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11044;QR=16665;RO=433;RPL=0;RPP=634.909;RPPR=943.258;RPR=291;RUN=1;SAF=291;SAP=634.909;SAR=0;SRF=433;SRP=943.258;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:30:18,0,2,5,5:18:689:0,2,5,5:0,78,197,191:-10.7926,-16.2112,-72.7492,-9.79923,-66.3373,-65.7352,0,-56.5403,-50.1281,-55.0351,-0.544537,-57.0787,-50.6667,-40.8695,-55.5735 0|1:68:50,0,0,8,10:50:1943:0,0,8,10:0,0,318,391:-17.0909,-32.1424,-191.798,-32.1424,-191.798,-191.798,-5.95761,-165.615,-165.615,-163.207,0,-159.652,-159.652,-133.469,-156.642 0|0:43:38,0,0,3,2:38:1448:0,0,3,2:0,0,101,81:0,-11.4391,-130.223,-11.4391,-130.223,-130.223,-3.30094,-122.047,-122.047,-121.144,-4.73272,-123.543,-123.543,-115.367,-122.94 0|1:87:41,0,0,8,37:41:1593:0,0,8,37:0,0,310,1380:-100.609,-112.951,-243.857,-112.951,-243.857,-243.857,-87.4811,-218.39,-218.39,-215.982,0,-130.915,-130.915,-105.448,-119.777 1|1:534:118,1,0,225,189:118:4484:1,0,225,189:35,0,8715,7174:-900.828,-933.502,-1300.9,-936.35,-1301.2,-1304.05,-220.469,-585.317,-588.165,-520.433,-348.188,-713.034,-715.882,0,-658.987 0|1:792:168,71,0,503,48:168:6508:71,0,503,48:2681,0,19537,1827:-1554.67,-1385.53,-1898.78,-1605.25,-1920.15,-2139.87,0,-314.912,-534.627,-383.209,-1455.41,-1770.32,-1990.03,-384.794,-1975.59 dDocent_Contig_4551 45 . A T 2906.38 . AB=0.158845;ABP=1123.11;AC=2;AF=0.166667;AN=12;AO=176;CIGAR=1X;DP=3027;DPB=3027;DPRA=1.15477;EPP=385.189;EPPR=6189.54;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6969;QR=112657;RO=2849;RPL=0;RPP=385.189;RPPR=6189.54;RPR=176;RUN=1;SAF=176;SAP=385.189;SAR=0;SRF=2849;SRP=6189.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:337:337,0:337:13322:0:0:0,-101.447,-1198.04 0/0:517:517,0:517:20426:0:0:0,-155.633,-1836.71 0/0:525:525,0:525:20860:0:0:0,-158.041,-1875.68 0/0:540:539,0:539:21274:0:0:0,-162.255,-1912.62 0/1:570:479,90:479:18921:90:3553:-148.338,0,-1529.94 0/1:538:452,86:452:17854:86:3416:-145.522,0,-1443.5 dDocent_Contig_4552 9 . T C 13809.9 . AB=0.28313;ABP=838.437;AC=2;AF=0.166667;AN=12;AO=581;CIGAR=1X;DP=4586;DPB=4586;DPRA=1.3749;EPP=1264.64;EPPR=8697.59;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998751;PAO=0;PQA=0;PQR=0;PRO=0;QA=22306;QR=153732;RO=4004;RPL=0;RPP=1264.64;RPPR=8697.59;RPR=581;RUN=1;SAF=581;SAP=1264.64;SAR=0;SRF=4004;SRP=8697.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:619:617,1:617:23725:1:39:0,-182.39,-2130.12 0/0:699:698,1:698:26737:1:37:0,-206.722,-2401.06 0/0:581:581,0:581:22305:0:0:0,-174.898,-2006.18 0/0:642:642,0:642:24659:0:0:0,-193.261,-2217.88 0/1:983:644,339:644:24747:339:13029:-876.108,0,-1929.87 0/1:1062:822,240:822:31559:240:9201:-508.103,0,-2518.66 dDocent_Contig_4554 7 . A C 51.7183 . AB=0.103774;ABP=147.557;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=1X;DP=443;DPB=443;DPRA=1.65049;EPP=57.2971;EPPR=858.909;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=59.5732;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.980488;PAO=0;PQA=0;PQR=0;PRO=0;QA=971;QR=15691;RO=410;RPL=0;RPP=57.2971;RPPR=893.314;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=406;SRP=858.909;SRR=4;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:48,0:48:1848:0:0:0,-14.4494,-166.179 0/0:82:78,3:78:2960:3:117:0,-13.6455,-255.546 0/0:48:44,3:44:1692:3:117:0,-3.46294,-141.681 0/1:106:95,11:95:3637:11:425:-6.69471,0,-292.283 0/0:53:52,0:52:1988:0:0:0,-15.6536,-178.587 0/0:104:93,8:93:3566:8:312:0,-2.34877,-289.558 dDocent_Contig_4555 36 . C T 4914.15 . AB=0.0337478;ABP=1066.09;AC=2;AF=0.166667;AN=12;AO=108;CIGAR=3M3I1X;DP=4510;DPB=4889.5;DPRA=1.61783;EPP=237.529;EPPR=8667.19;GTI=0;LEN=1;MEANALT=4.75;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4089;QR=157332;RO=3990;RPL=0;RPP=237.529;RPPR=8667.19;RPR=108;RUN=1;SAF=108;SAP=237.529;SAR=0;SRF=3990;SRP=8667.19;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:859:771,32,49:771:30363:32,49:1197,1840:0,-134.08,-2622.2,-81.3668,-2481.11,-2564.37 0|0:847:806,26,14:806:31838:26,14:1007,542:0,-159.909,-2771.85,-198.107,-2735.15,-2813.66 0|1:563:494,48,19:494:19488:48,19:1869,726:-4.90367,0,-1588.91,-94.0533,-1543.8,-1691.69 0|0:889:791,69,26:791:31304:69,26:2642,981:0,-21.296,-2576.8,-157.72,-2517.18,-2726.16 0|0:488:488,0,0:488:19260:0,0:0,0:0,-146.903,-1731.96,-146.903,-1731.96,-1731.96 0|1:864:640,218,0:640:25079:218,0:8317,0:-489.733,0,-1996.63,-682.392,-2062.25,-2744.53 dDocent_Contig_4556 1 . N G 482.08 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=15;CIGAR=1X;DP=15;DPB=15;DPRA=0;EPP=35.5824;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=519;QR=0;RO=0;RPL=0;RPP=35.5824;RPPR=0;RPR=15;RUN=1;SAF=0;SAP=35.5824;SAR=15;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:104:-9.70309,-0.90309,0 1/1:5:0,5:0:0:5:173:-15.9102,-1.50515,0 ./.:.:.:.:.:.:.:. 1/1:7:0,7:0:0:7:242:-22.1174,-2.10721,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_4557 111 . C A 2073.08 . AB=0.265207;ABP=199.811;AC=4;AF=0.333333;AN=12;AO=112;CIGAR=1X;DP=618;DPB=618;DPRA=0.664336;EPP=246.215;EPPR=1099.6;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3839;QR=17177;RO=505;RPL=0;RPP=246.215;RPPR=1099.6;RPR=112;RUN=1;SAF=0;SAP=246.215;SAR=112;SRF=0;SRP=1099.6;SRR=505;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:52:42,10:42:1424:10:335:-14.8204,0,-112.802 0/1:136:78,58:78:2638:58:2001:-139.429,0,-196.734 0/1:94:82,12:82:2786:12:414:-9.29448,0,-222.693 0/1:129:99,29:99:3329:29:994:-50.9861,0,-261.06 0/0:64:61,3:61:2092:3:95:0,-10.4019,-179.691 0/0:143:143,0:143:4908:0:0:0,-43.0473,-441.903 dDocent_Contig_4558 35 . C T 113 . AB=0.169811;ABP=53.2;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=378;DPB=378;DPRA=0.789668;EPP=33.4109;EPPR=793.426;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=490;QR=14040;RO=364;RPL=0;RPP=33.4109;RPPR=793.426;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=364;SRP=793.426;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:49,5:49:1875:5:174:0,-0.254791,-152.979 0/0:65:65,0:65:2535:0:0:0,-19.5669,-228.321 0/0:79:79,0:79:3052:0:0:0,-23.7814,-274.827 0/0:75:75,0:75:2841:0:0:0,-22.5772,-255.839 0/0:52:52,0:52:2042:0:0:0,-15.6536,-183.995 0/1:53:44,9:44:1695:9:316:-12.8225,0,-136.846 dDocent_Contig_4559 26 . T C 121.326 . AB=0.166667;ABP=43.5445;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=1X;DP=146;DPB=146;DPRA=0.807692;EPP=18.2106;EPPR=304.845;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.714286;PAIREDR=0.76259;PAO=0;PQA=0;PQR=0;PRO=0;QA=282;QR=5505;RO=139;RPL=0;RPP=18.2106;RPPR=304.845;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=139;SRP=304.845;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:17:12,5:12:463:5:201:-13.3534,0,-36.8977 0/0:20:20,0:20:781:0:0:0,-6.0206,-70.611 0/0:26:26,0:26:1039:0:0:0,-7.82678,-93.8045 0/0:39:39,0:39:1550:0:0:0,-11.7402,-139.743 0/1:25:23,2:23:913:2:81:-0.159984,0,-74.9547 0/0:19:19,0:19:759:0:0:0,-5.71957,-68.6318 dDocent_Contig_4560 38 . G C 36.4032 . AB=0.1875;ABP=16.582;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=393;DPB=393;DPRA=0.535484;EPP=11.6962;EPPR=847.713;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=148;QR=15522;RO=389;RPL=0;RPP=11.6962;RPPR=847.713;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=389;SRP=847.713;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:406:0:0:0,-3.0103,-36.9006 0/0:46:46,0:46:1822:0:0:0,-13.8474,-164.193 0/1:16:13,3:13:527:3:107:-5.1631,0,-42.9603 0/0:67:66,1:66:2655:1:41:0,-16.0744,-234.969 0/0:121:121,0:121:4805:0:0:0,-36.4246,-432.349 0/0:133:133,0:133:5307:0:0:0,-40.037,-477.48 dDocent_Contig_4561 11 . G T 47.1877 . AB=0.111111;ABP=85.7675;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=330;DPB=330;DPRA=1.14286;EPP=22.5536;EPPR=700.053;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.222222;PAIREDR=0.794393;PAO=0;PQA=0;PQR=0;PRO=0;QA=358;QR=12875;RO=321;RPL=0;RPP=22.5536;RPPR=700.053;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=321;SRP=700.053;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:47:47,0:47:1849:0:0:0,-14.1484,-166.62 0/0:57:55,2:55:2214:2:82:0,-9.37903,-191.638 0/0:36:36,0:36:1447:0:0:0,-10.8371,-130.472 0/1:63:56,7:56:2243:7:276:-6.24164,0,-183.069 0/0:59:59,0:59:2379:0:0:0,-17.7608,-214.253 0/0:68:68,0:68:2743:0:0:0,-20.47,-246.975 dDocent_Contig_4563 9 . T A 11741.6 . AB=0.233234;ABP=1450.04;AC=2;AF=0.166667;AN=12;AO=660;CIGAR=1X;DP=5537;DPB=5537;DPRA=0;EPP=1436.18;EPPR=10588.9;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=25295;QR=185826;RO=4875;RPL=0;RPP=1436.18;RPPR=10588.9;RPR=660;RUN=1;SAF=660;SAP=1436.18;SAR=0;SRF=4875;SRP=10588.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:736:721,15:721:27333:15:578:0,-169.196,-2406.07 0/0:900:869,31:869:33207:31:1184:0,-164.072,-2879.77 0/0:646:634,12:634:24232:12:454:0,-153.257,-2138.31 0/0:914:858,56:858:32759:56:2161:0,-80.4287,-2751.64 0/1:1166:872,294:872:33141:294:11293:-664.92,0,-2629.72 0/1:1175:921,252:921:35154:252:9625:-512.465,0,-2808.23 dDocent_Contig_4564 18 . A C 3903.35 . AB=0.262726;ABP=300.816;AC=5;AF=0.416667;AN=12;AO=161;CIGAR=1X;DP=705;DPB=705;DPRA=0;EPP=352.617;EPPR=1182.12;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992634;PAO=0;PQA=0;PQR=0;PRO=0;QA=6503;QR=21392;RO=543;RPL=0;RPP=352.617;RPPR=1182.12;RPR=161;RUN=1;SAF=161;SAP=352.617;SAR=0;SRF=543;SRP=1182.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:96:95,1:95:3752:1:40:0,-24.9032,-333.715 0/1:100:76,24:76:2998:24:971:-57.5845,0,-239.806 0/1:93:72,21:72:2869:21:858:-49.5326,0,-230.319 0/1:136:108,28:108:4215:28:1137:-61.669,0,-338.388 0/1:115:77,38:77:3019:38:1523:-102.693,0,-237.192 0/1:165:115,49:115:4539:49:1974:-128.077,0,-358.662 dDocent_Contig_4566 50 . C T 522.775 . AB=0.197279;ABP=120.019;AC=2;AF=0.166667;AN=12;AO=29;CIGAR=1X;DP=434;DPB=434;DPRA=1.02439;EPP=65.983;EPPR=882.457;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1101;QR=16189;RO=405;RPL=29;RPP=65.983;RPPR=882.457;RPR=0;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=405;SRP=882.457;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:60:60,0:60:2411:0:0:0,-18.0618,-217.141 0/0:61:61,0:61:2449:0:0:0,-18.3628,-220.555 0/0:121:121,0:121:4822:0:0:0,-36.4246,-433.891 0/0:45:45,0:45:1774:0:0:0,-13.5463,-159.862 0/1:72:63,9:63:2531:9:363:-11.3605,0,-206.248 0/1:75:55,20:55:2202:20:738:-44.1389,0,-175.778 dDocent_Contig_4567 31 . C T 3352.47 . AB=0.250444;ABP=307.56;AC=5;AF=0.416667;AN=12;AO=141;CIGAR=1X;DP=600;DPB=600;DPRA=3.04324;EPP=309.188;EPPR=999.716;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5695;QR=18249;RO=459;RPL=0;RPP=309.188;RPPR=999.716;RPR=141;RUN=1;SAF=141;SAP=309.188;SAR=0;SRF=459;SRP=999.716;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:83:44,39:44:1769:39:1568:-116.369,0,-134.439 0/1:138:90,48:90:3527:48:1933:-132.623,0,-275.919 0/1:54:46,8:46:1809:8:323:-13.183,0,-146.757 0/1:194:177,17:177:7097:17:692:-4.20841,0,-579.976 0/0:37:37,0:37:1471:0:0:0,-11.1381,-132.636 0/1:94:65,29:65:2576:29:1179:-78.0858,0,-203.666 dDocent_Contig_4568 33 . G T 1444.32 . AB=0.155477;ABP=586.546;AC=2;AF=0.166667;AN=12;AO=89;CIGAR=1X;DP=1722;DPB=1722;DPRA=0.972509;EPP=196.271;EPPR=3540.34;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996317;PAO=0;PQA=0;PQR=0;PRO=0;QA=3571;QR=64842;RO=1629;RPL=0;RPP=196.271;RPPR=3540.34;RPR=89;RUN=1;SAF=89;SAP=196.271;SAR=0;SRF=1629;SRP=3540.34;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:189:187,0:187:7453:0:0:0,-56.2926,-670.064 0/0:283:281,1:281:11172:1:41:0,-81.0456,-1000.8 0/0:375:375,0:375:14990:0:0:0,-112.886,-1347.94 0/0:309:309,0:309:12342:0:0:0,-93.0183,-1109.9 0/1:224:176,47:176:6855:47:1879:-101.792,0,-549.167 0/1:342:301,41:301:12030:41:1651:-45.862,0,-978.884 dDocent_Contig_4569 107 . N G 150.013 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=6;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=155;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:84:-7.83769,-0.90309,0 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,2:0:0:2:42:-3.78539,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_4570 80 . T A 2384.47 . AB=0.256356;ABP=246.381;AC=6;AF=0.5;AN=12;AO=121;CIGAR=1X;DP=472;DPB=472;DPRA=0;EPP=265.758;EPPR=763.026;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.595041;PAIREDR=0.76;PAO=0;PQA=0;PQR=0;PRO=0;QA=4332;QR=12785;RO=350;RPL=121;RPP=265.758;RPPR=763.026;RPR=0;RUN=1;SAF=121;SAP=265.758;SAR=0;SRF=350;SRP=763.026;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:70:39,31:39:1423:31:1130:-80.9368,0,-107.291 0/1:90:67,23:67:2424:23:793:-44.5855,0,-191.312 0/1:56:44,11:44:1624:11:407:-20.0519,0,-129.518 0/1:84:51,33:51:1866:33:1175:-80.7622,0,-142.926 0/1:70:60,10:60:2195:10:356:-11.3077,0,-176.733 0/1:102:89,13:89:3253:13:471:-12.0246,0,-262.266 dDocent_Contig_4571 15 . A C 38589.1 . AB=0.0686275;ABP=1651.63;AC=0;AF=0;AN=12;AO=70;CIGAR=1X2M1X;DP=1740;DPB=1740;DPRA=0.708333;EPP=155.013;EPPR=988.859;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2759;QR=17751;RO=454;RPL=0;RPP=155.013;RPPR=988.859;RPR=70;RUN=1;SAF=70;SAP=155.013;SAR=0;SRF=454;SRP=988.859;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:217:87,15,115:87:3393:15,115:587,4479:-341.857,-319.786,-594.151,0,-230.618,-244.26 0|0:300:174,18,108:174:6793:18,108:717,4211:-293.697,-287.033,-840.004,0,-499.34,-525.871 0|0:210:48,27,135:48:1900:27,135:1061,5365:-427.222,-354.407,-502.654,0,-69.1122,-115.737 0|0:293:98,10,185:98:3848:10,185:394,7323:-573.134,-570.221,-883.681,0,-284.056,-260.78 0|0:329:15,0,313:15:593:0,313:0,12370:-1058.76,-1063.27,-1112.07,-45.2871,-94.2224,0 0|0:391:32,0,359:32:1224:0,359:0,14255:-1171.47,-1181.1,-1281.52,-7.26555,-108.07,0 dDocent_Contig_4572 98 . N C 148.75 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0.2;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=146;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_4573 14 . A T 14840 . AB=0.227782;ABP=1842.56;AC=5;AF=0.416667;AN=12;AO=669;CIGAR=1X;DP=3241;DPB=3241;DPRA=0;EPP=1455.73;EPPR=5583.69;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=26895;QR=102259;RO=2570;RPL=0;RPP=1455.73;RPPR=5583.69;RPR=669;RUN=1;SAF=669;SAP=1455.73;SAR=0;SRF=2570;SRP=5583.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:377:341,36:341:13526:36:1430:-15.4612,0,-1102.91 0/1:524:451,72:451:17965:72:2887:-102.075,0,-1457.56 0/0:383:365,18:365:14585:18:736:0,-48.7321,-1244.98 0/1:591:517,73:517:20457:73:2936:-86.6115,0,-1661.76 0/1:635:393,242:393:15679:242:9744:-685.14,0,-1218.73 0/1:731:503,228:503:20047:228:9162:-603.939,0,-1582.51 dDocent_Contig_4574 40 . T C 16899.7 . AB=0.639151;ABP=145.631;AC=4;AF=0.333333;AN=12;AO=548;CIGAR=1X;DP=1772;DPB=1772;DPRA=0.503175;EPP=1192.98;EPPR=2658.72;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.946034;PAO=0;PQA=0;PQR=0;PRO=0;QA=21934;QR=48829;RO=1223;RPL=0;RPP=1192.98;RPPR=2658.72;RPR=548;RUN=1;SAF=548;SAP=1192.98;SAR=0;SRF=1223;SRP=2658.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:199:84,114:84:3373:114:4536:-348.259,0,-243.708 0/1:276:77,199:77:3083:199:8032:-639.319,0,-194.462 0/1:141:85,56:85:3394:56:2212:-156.812,0,-263.051 0/1:232:59,173:59:2316:173:6922:-552.799,0,-138.763 0/0:504:504,0:504:20086:0:0:0,-151.719,-1806.03 0/0:420:414,6:414:16577:6:232:0,-105.191,-1469.33 dDocent_Contig_4575 9 . T A 491.055 . AB=0.184049;ABP=144.343;AC=4;AF=0.333333;AN=12;AO=34;CIGAR=1X;DP=231;DPB=231;DPRA=0;EPP=76.8404;EPPR=428.619;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.970588;PAIREDR=0.928571;PAO=0;PQA=0;PQR=0;PRO=0;QA=1309;QR=7546;RO=196;RPL=0;RPP=76.8404;RPPR=428.619;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=196;SRP=428.619;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:18,7:18:690:7:265:-16.3753,0,-54.6027 0/0:25:24,1:24:914:1:37:0,-3.82792,-78.8752 0/1:32:24,8:24:928:8:311:-18.7214,0,-74.2037 0/0:43:40,3:40:1530:3:117:0,-2.03391,-127.059 0/1:55:49,6:49:1895:6:232:-4.69228,0,-154.237 0/1:50:41,9:41:1589:9:347:-16.5383,0,-128.224 dDocent_Contig_4576 21 . G A 75.0789 . AB=0.0900901;ABP=489.009;AC=1;AF=0.0833333;AN=12;AO=62;CIGAR=1X;DP=2010;DPB=2010;DPRA=1.12249;EPP=137.642;EPPR=4228.7;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999486;PAO=0;PQA=0;PQR=0;PRO=0;QA=2483;QR=76722;RO=1946;RPL=0;RPP=137.642;RPPR=4228.7;RPR=62;RUN=1;SAF=62;SAP=137.642;SAR=0;SRF=1946;SRP=4228.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:215:215,0:215:8415:0:0:0,-64.7214,-756.956 0/0:345:343,2:343:13559:2:81:0,-96.1696,-1211.69 0/0:380:380,0:380:15074:0:0:0,-114.391,-1355.51 0/0:352:351,0:351:13829:0:0:0,-105.662,-1243.48 0/1:333:302,30:302:11911:30:1209:-9.03077,0,-971.152 0/0:385:355,30:355:13934:30:1193:0,-8.24992,-1145.45 dDocent_Contig_4577 18 . A G 1072.62 . AB=0.161137;ABP=423.905;AC=4;AF=0.333333;AN=12;AO=68;CIGAR=1X;DP=686;DPB=686;DPRA=0.799242;EPP=150.67;EPPR=1344.98;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.955882;PAIREDR=0.928803;PAO=0;PQA=0;PQR=0;PRO=0;QA=2669;QR=24470;RO=618;RPL=0;RPP=150.67;RPPR=1344.98;RPR=68;RUN=1;SAF=68;SAP=150.67;SAR=0;SRF=618;SRP=1344.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:99:77,22:77:3036:22:834:-45.5568,0,-243.522 0/1:97:77,20:77:3084:20:797:-42.8487,0,-248.442 0/1:102:91,11:91:3553:11:439:-9.15838,0,-289.109 0/1:124:109,15:109:4335:15:599:-16.9201,0,-352.784 0/0:106:106,0:106:4162:0:0:0,-31.9092,-374.562 0/0:158:158,0:158:6300:0:0:0,-47.5627,-566.75 dDocent_Contig_4578 11 . C A 7890.12 . AB=0.140496;ABP=274.678;AC=1;AF=0.0833333;AN=12;AO=41;CIGAR=1X3M1X2M1X;DP=1374;DPB=1374;DPRA=0;EPP=92.0407;EPPR=1861.79;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1613;QR=33754;RO=856;RPL=0;RPP=92.0407;RPPR=1861.79;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=856;SRP=1861.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:260:120,0,41,99:120:4727:0,41,99:0,1601,3898:-284.491,-320.615,-709.485,-189.012,-577.882,-565.539,0,-388.872,-257.269,-359.07 0|0:226:115,0,39,71:115:4524:0,39,71:0,1531,2855:-200.66,-235.279,-607.404,-109.375,-481.497,-469.757,0,-372.128,-246.221,-350.755 0|0:145:53,0,40,52:53:2100:0,40,52:0,1570,2069:-154.387,-170.341,-343.187,-41.2258,-214.071,-202.03,0,-172.848,-43.732,-157.195 0|0:306:207,0,46,50:207:8189:0,46,50:0,1802,2005:-102.876,-165.19,-839.122,-17.023,-690.954,-677.106,0,-673.938,-525.769,-658.886 0|1:242:179,34,0,29:179:7043:34,0,29:1334,0,1155:-55.8191,0,-569.109,-109.703,-579.344,-689.05,-14.6029,-484.245,-593.952,-585.222 0|0:195:182,7,4,2:182:7171:7,4,2:279,150,82:0,-31.8049,-619.657,-42.5106,-609.48,-631.252,-48.0162,-614.996,-625.688,-637.37 dDocent_Contig_4579 96 . G C 106583 . AB=0.505372;ABP=4.2468;AC=6;AF=0.5;AN=12;AO=2493;CIGAR=1X1M1X;DP=4933;DPB=4936.67;DPRA=0;EPP=5416.49;EPPR=0;GTI=0;LEN=1;MEANALT=3.33333;MQM=60;MQMR=0;NS=6;NUMALT=3;ODDS=0;PAIRED=0.993181;PAIREDR=0;PAO=6;PQA=42;PQR=33.1667;PRO=1.33333;QA=84122;QR=0;RO=0;RPL=2493;RPP=5416.49;RPPR=0;RPR=0;RUN=1;SAF=2493;SAP=5416.49;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:725:0,300,195,230:0:0:300,195,230:10079,6563,7716:-1441.46,-624.966,-534.657,-909.691,-93.1933,-850.991,-816.497,0,-284.725,-747.261 1|0:1122:0,612,232,276:0:0:612,232,276:20663,7824,9265:-2425.3,-750.487,-566.256,-1791.22,-116.4,-1721.38,-1674.82,0,-1040.73,-1591.73 1|0:578:0,313,102,163:0:0:313,102,163:10614,3450,5494:-1305.93,-445.223,-351,-1026.25,-165.534,-995.541,-860.712,0,-581.023,-811.644 1|0:1213:0,628,286,299:0:0:628,286,299:21281,9732,10083:-2542.75,-817.154,-628.107,-1753.26,-27.6689,-1667.17,-1725.59,0,-936.11,-1635.59 1|0:659:0,297,87,250:0:0:297,87,250:9984,2951,8391:-1488.54,-679.681,-590.275,-1249.23,-440.371,-1223.04,-808.859,0,-569.549,-733.602 1|0:636:0,343,96,197:0:0:343,96,197:11501,3233,6595:-1465.55,-534.047,-430.793,-1203.57,-272.075,-1174.68,-931.497,0,-669.526,-872.194 dDocent_Contig_4580 11 . A C 87.9231 . AB=0.178571;ABP=28.1373;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=101;DPB=101;DPRA=1.91781;EPP=13.8677;EPPR=194.462;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.927083;PAO=0;PQA=0;PQR=0;PRO=0;QA=204;QR=3817;RO=96;RPL=0;RPP=13.8677;RPPR=211.472;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=94;SRP=194.462;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:13:13,0:13:518:0:0:0,-3.91339,-46.9663 0/0:16:16,0:16:642:0:0:0,-4.81648,-58.1138 0/0:11:11,0:11:442:0:0:0,-3.31133,-40.1358 0/1:28:23,5:23:902:5:204:-10.3152,0,-73.0592 0/0:10:10,0:10:402:0:0:0,-3.0103,-36.5401 0/0:23:23,0:23:911:0:0:0,-6.92369,-82.2918 dDocent_Contig_4581 17 . A G 718.301 . AB=0.146853;ABP=467.721;AC=5;AF=0.416667;AN=12;AO=67;CIGAR=1X;DP=509;DPB=509;DPRA=0;EPP=148.499;EPPR=962.801;GTI=0;LEN=1;MEANALT=1;MQM=59.4627;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.985075;PAIREDR=0.9819;PAO=0;PQA=0;PQR=0;PRO=0;QA=2496;QR=17332;RO=442;RPL=0;RPP=148.499;RPPR=962.801;RPR=67;RUN=1;SAF=67;SAP=148.499;SAR=0;SRF=442;SRP=962.801;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:67:58,9:58:2281:9:344:-11.1453,0,-185.298 0/1:95:85,10:85:3351:10:361:-4.22893,0,-273.056 0/1:83:68,15:68:2654:15:584:-27.913,0,-214.006 0/1:96:85,11:85:3318:11:405:-6.34015,0,-269.79 0/1:88:70,18:70:2700:18:640:-31.4241,0,-216.637 0/0:80:76,4:76:3028:4:162:0,-9.11544,-257.646 dDocent_Contig_4582 12 . T C 74449.1 . AB=0.594214;ABP=314.794;AC=6;AF=0.5;AN=12;AO=2403;CIGAR=1X;DP=4044;DPB=4044;DPRA=0;EPP=5221.06;EPPR=3564.23;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998171;PAO=0;PQA=0;PQR=0;PRO=0;QA=96462;QR=65297;RO=1640;RPL=0;RPP=5221.06;RPPR=3564.23;RPR=2403;RUN=1;SAF=2403;SAP=5221.06;SAR=0;SRF=1640;SRP=3564.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:469:219,250:219:8643:250:9994:-757.611,0,-636.238 0/1:741:299,441:299:11919:441:17687:-1367.16,0,-848.736 0/1:356:150,206:150:5937:206:8259:-635.653,0,-426.971 0/1:775:410,365:410:16281:365:14667:-1085.54,0,-1230.77 0/1:884:277,607:277:11087:607:24407:-1928.29,0,-730.951 0/1:819:285,534:285:11430:534:21448:-1681.87,0,-781.349 dDocent_Contig_4583 31 . G A 72.1899 . AB=0.127273;ABP=69.3784;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=654;DPB=654;DPRA=0.440299;EPP=24.725;EPPR=1388.41;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996865;PAO=0;PQA=0;PQR=0;PRO=0;QA=399;QR=25202;RO=638;RPL=0;RPP=24.725;RPPR=1388.41;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=638;SRP=1388.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:79:79,0:79:3080:0:0:0,-23.7814,-277.294 0/0:207:203,0:203:8063:0:0:0,-61.1091,-724.84 0/0:113:113,0:113:4386:0:0:0,-34.0164,-394.706 0/0:137:135,0:135:5364:0:0:0,-40.639,-482.206 0/1:55:48,7:48:1897:7:277:-8.74187,0,-154.379 0/0:63:60,3:60:2412:3:122:0,-7.5924,-205.854 dDocent_Contig_4584 26 . T C 649.005 . AB=0.292135;ABP=36.4119;AC=3;AF=0.25;AN=12;AO=27;CIGAR=1X;DP=143;DPB=143;DPRA=1.48611;EPP=61.6401;EPPR=254.901;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.814815;PAIREDR=0.948276;PAO=0;PQA=0;PQR=0;PRO=0;QA=1091;QR=4640;RO=116;RPL=0;RPP=61.6401;RPPR=254.901;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=116;SRP=254.901;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:922:0:0:0,-6.92369,-83.2829 0/0:18:17,1:17:680:1:40:0,-1.42286,-57.5339 0/0:13:13,0:13:529:0:0:0,-3.91339,-47.9564 0/1:47:29,18:29:1166:18:727:-51.6065,0,-91.0707 0/1:11:10,1:10:392:1:41:-0.783237,0,-32.3239 0/1:31:24,7:24:951:7:283:-16.5114,0,-76.5585 dDocent_Contig_4585 86 . T A 6823.33 . AB=0.155803;ABP=3602.55;AC=5;AF=0.416667;AN=12;AO=583;CIGAR=1X;DP=4331;DPB=4331;DPRA=0;EPP=1268.98;EPPR=8135.17;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999733;PAO=0;PQA=0;PQR=0;PRO=0;QA=20678;QR=138270;RO=3745;RPL=583;RPP=1268.98;RPPR=8135.17;RPR=0;RUN=1;SAF=583;SAP=1268.98;SAR=0;SRF=3745;SRP=8135.17;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:564:414,150:414:15018:150:5287:-306.162,0,-1181.46 0/1:673:550,123:550:20004:123:4370:-190.867,0,-1597.15 0/1:434:385,49:385:14673:49:1812:-32.6943,0,-1189.24 0/1:847:730,116:730:27824:116:4107:-114.906,0,-2247.65 0/0:833:794,38:794:28933:38:1304:0,-133.178,-2485.24 0/1:980:872,107:872:31818:107:3798:-46.9254,0,-2567.31 dDocent_Contig_4586 15 . T C 655.179 . AB=0.114192;ABP=795.541;AC=1;AF=0.0833333;AN=12;AO=145;CIGAR=1X;DP=4677;DPB=4677;DPRA=0.840614;EPP=317.874;EPPR=9844.12;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998676;PAO=0;PQA=0;PQR=0;PRO=0;QA=5749;QR=180560;RO=4532;RPL=0;RPP=317.874;RPPR=9844.12;RPR=145;RUN=1;SAF=145;SAP=317.874;SAR=0;SRF=4532;SRP=9844.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:510:510,0:510:20167:0:0:0,-153.525,-1813.4 0/1:613:543,70:543:21708:70:2794:-67.0408,0,-1767.3 0/0:613:609,4:609:24238:4:136:0,-171.96,-2166.71 0/0:910:839,71:839:33539:71:2819:0,-20.1303,-2761.58 0/0:948:948,0:948:37852:0:0:0,-285.376,-3403.09 0/0:1083:1083,0:1083:43056:0:0:0,-326.015,-3870.97 dDocent_Contig_4588 16 . G A 65076.3 . AB=0.465557;ABP=51.924;AC=6;AF=0.5;AN=12;AO=2210;CIGAR=1X;DP=4747;DPB=4747;DPRA=0;EPP=4801.96;EPPR=5509.86;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998643;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=88384;QR=100458;RO=2536;RPL=0;RPP=4801.96;RPPR=5509.86;RPR=2210;RUN=1;SAF=2210;SAP=4801.96;SAR=0;SRF=2536;SRP=5509.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:679:486,193:486:19269:193:7753:-492.94,0,-1528.25 0/1:720:465,255:465:18503:255:10207:-701.205,0,-1447.01 0/1:594:312,282:312:12489:282:11253:-833.167,0,-944.281 0/1:820:471,349:471:18584:349:14008:-1012.79,0,-1424.22 0/1:930:389,541:389:15443:541:21515:-1654.56,0,-1108.72 0/1:1004:413,590:413:16170:590:23648:-1824.2,0,-1152.06 dDocent_Contig_4589 22 . G T 4260.8 . AB=0.147577;ABP=492.787;AC=2;AF=0.166667;AN=12;AO=99;CIGAR=1M1X8M;DP=2347;DPB=2568.5;DPRA=0;EPP=217.986;EPPR=4141.84;GTI=0;LEN=1;MEANALT=6.75;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.990031;PAO=0;PQA=0;PQR=0;PRO=0;QA=3895;QR=73441;RO=1906;RPL=0;RPP=217.986;RPPR=4141.84;RPR=99;RUN=1;SAF=99;SAP=217.986;SAR=0;SRF=1906;SRP=4141.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:159:109,0,0,35,13:109:4192:0,0,35,13:0,0,1388,499:-81.4522,-114.264,-458.412,-114.264,-458.412,-458.412,0,-344.167,-344.167,-333.631,-73.3059,-417.452,-417.452,-303.207,-413.539 0|0:376:341,0,17,7,6:341:13097:0,17,7,6:0,554,271,231:0,-102.651,-1177.77,-57.9343,-1133.05,-1127.93,-80.3768,-1155.51,-1110.79,-1153.4,-83.6719,-1158.8,-1114.08,-1136.54,-1156.99 0|1:295:240,0,8,32,12:240:9241:0,8,32,12:0,282,1246,458:-30.1463,-102.393,-861.099,-79.4382,-838.14,-835.731,0,-758.718,-735.759,-749.085,-64.8179,-823.524,-800.565,-721.143,-819.911 0|0:393:333,0,23,25,3:333:12840:0,23,25,3:0,811,990,110:0,-100.243,-1154.59,-34.221,-1088.56,-1081.64,-18.7452,-1073.11,-1007.08,-1065.59,-91.2521,-1145.6,-1079.57,-1064.12,-1144.7 0|0:572:453,112,0,0,0:453:17511:112,0,0,0:3656,0,0,0:-158.9,0,-1404.66,-295.267,-1438.37,-1733.55,-295.267,-1438.37,-1733.55,-1733.55,-295.267,-1438.37,-1733.55,-1733.55,-1733.55 0|0:552:430,106,6,0,1:430:16560:106,6,0,1:3603,194,0,41:-162.803,0,-1327.82,-276.599,-1344.08,-1634.47,-292.246,-1359.72,-1636.28,-1651.92,-288.861,-1356.34,-1632.89,-1648.54,-1648.24 dDocent_Contig_4590 55 . A G 407.19 . AB=0.128713;ABP=365.818;AC=4;AF=0.333333;AN=12;AO=39;CIGAR=1X;DP=404;DPB=404;DPRA=1.5;EPP=87.6977;EPPR=793.426;GTI=0;LEN=1;MEANALT=1.25;MQM=59.6923;MQMR=59.9973;NS=6;NUMALT=1;ODDS=0;PAIRED=0.74359;PAIREDR=0.634615;PAO=0;PQA=0;PQR=0;PRO=0;QA=1516;QR=14280;RO=364;RPL=39;RPP=87.6977;RPPR=793.426;RPR=0;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=364;SRP=793.426;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:43:35,8:35:1380:8:285:-13.0332,0,-111.517 0/1:59:54,5:54:2076:5:200:-0.618563,0,-169.268 0/0:42:42,0:42:1658:0:0:0,-12.6433,-149.453 0/1:109:98,10:98:3854:10:388:-2.3638,0,-313.972 0/0:59:59,0:59:2304:0:0:0,-17.7608,-207.54 0/1:92:76,16:76:3008:16:643:-30.5108,0,-243.127 dDocent_Contig_4591 15 . G T 2482.15 . AB=0.181818;ABP=612.404;AC=2;AF=0.166667;AN=12;AO=162;CIGAR=1X;DP=2060;DPB=2060;DPRA=0.746973;EPP=354.789;EPPR=4124.46;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.975309;PAIREDR=0.993678;PAO=0;PQA=0;PQR=0;PRO=0;QA=6559;QR=75614;RO=1898;RPL=0;RPP=354.789;RPPR=4124.46;RPR=162;RUN=1;SAF=162;SAP=354.789;SAR=0;SRF=1898;SRP=4124.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:265:222,43:222:8791:43:1744:-77.398,0,-710.919 0/0:357:335,22:335:13366:22:880:0,-27.9643,-1122.43 0/0:184:170,14:170:6775:14:570:0,-3.74791,-557.794 0/1:428:345,83:345:13662:83:3365:-174.039,0,-1099.74 0/0:384:384,0:384:15361:0:0:0,-115.596,-1381.29 0/0:442:442,0:442:17659:0:0:0,-133.055,-1587.87 dDocent_Contig_4592 28 . G T 183.922 . AB=0.130769;ABP=156.951;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=263;DPB=263;DPRA=2.09412;EPP=46.4397;EPPR=530.678;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=787;QR=9606;RO=243;RPL=0;RPP=46.4397;RPPR=530.678;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=243;SRP=530.678;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1600:0:0:0,-12.3422,-144.244 0/0:17:17,0:17:687:0:0:0,-5.11751,-62.1599 0/1:96:84,12:84:3319:12:469:-13.654,0,-269.868 0/1:34:29,5:29:1151:5:198:-7.95999,0,-93.6401 0/0:27:27,0:27:1077:0:0:0,-8.12781,-97.2202 0/0:48:45,3:45:1772:3:120:0,-3.26213,-148.513 dDocent_Contig_4593 24 . T C 803.566 . AB=0.131805;ABP=413.966;AC=2;AF=0.166667;AN=12;AO=46;CIGAR=1M1I2X1M1X;DP=641;DPB=650.2;DPRA=0.981716;EPP=102.898;EPPR=1255.95;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.956522;PAIREDR=0.979203;PAO=0;PQA=0;PQR=0;PRO=0;QA=1771;QR=22899;RO=577;RPL=0;RPP=102.898;RPPR=1255.95;RPR=46;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=577;SRP=1255.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:111:95,4,12:95:3785:4,12:153,480:-10.9537,-27.0019,-337.474,0,-299.139,-308.08 0|1:133:105,28,0:105:4168:28,0:1083,0:-57.7334,0,-335.069,-89.3416,-343.498,-432.451 0|0:55:50,0,5:50:1981:0,5:0,191:-0.995158,-16.0467,-179.097,0,-163.434,-161.928 0|1:105:91,14,0:91:3622:14,0:535,0:-16.8842,0,-294.414,-44.2779,-298.628,-342.522 0|0:110:110,0,0:110:4361:0,0:0,0:0,-33.1133,-392.461,-33.1133,-392.461,-392.461 0|0:127:126,0,0:126:4982:0,0:0,0:0,-37.9298,-447.894,-37.9298,-447.894,-447.894 dDocent_Contig_4594 28 . A C 51.1541 . AB=0.107692;ABP=89.9026;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=340;DPB=340;DPRA=1.18182;EPP=18.2106;EPPR=726.111;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=287;QR=12938;RO=333;RPL=0;RPP=18.2106;RPPR=726.111;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=333;SRP=726.111;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:49:49,0:49:1914:0:0:0,-14.7505,-172.461 0/1:65:58,7:58:2214:7:287:-6.63828,0,-179.874 0/0:48:48,0:48:1925:0:0:0,-14.4494,-173.454 0/0:73:73,0:73:2857:0:0:0,-21.9752,-257.241 0/0:60:60,0:60:2317:0:0:0,-18.0618,-208.699 0/0:45:45,0:45:1711:0:0:0,-13.5463,-154.21 dDocent_Contig_4595 23 . G A 2513.17 . AB=0.113523;ABP=780.133;AC=1;AF=0.0833333;AN=12;AO=68;CIGAR=1M1X3M;DP=1177;DPB=1164.8;DPRA=0;EPP=150.67;EPPR=1672.87;GTI=0;LEN=1;MEANALT=7;MQM=60;MQMR=59.9948;NS=6;NUMALT=7;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2626;QR=30314;RO=769;RPL=0;RPP=150.67;RPPR=1672.87;RPR=68;RUN=1;SAF=68;SAP=150.67;SAR=0;SRF=769;SRP=1672.87;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:140:94,14,0,5,0,0,15,9:94:3672:14,0,5,0,0,15,9:558,0,202,0,0,591,366:-20.3202,-2.66333,-300.291,-48.6171,-304.505,-350.457,-31.9621,-287.851,-333.803,-332.297,-48.6171,-304.505,-350.457,-333.803,-350.457,-48.6171,-304.505,-350.457,-333.803,-350.457,-350.457,0,-255.889,-301.84,-285.186,-301.84,-301.84,-297.325,-18.4242,-274.315,-320.266,-303.612,-320.266,-320.266,-271.65,-317.557 0|0:224:148,8,0,0,0,13,29,21:148:5848:8,0,0,0,13,29,21:311,0,0,0,515,1159,813:-50.9172,-69.9132,-548.731,-95.4696,-551.14,-576.695,-95.4696,-551.14,-576.695,-576.695,-95.4696,-551.14,-576.695,-576.695,-576.695,-53.0791,-508.751,-534.307,-534.307,-534.307,-530.394,0,-455.679,-481.234,-481.234,-481.234,-438.846,-472.505,-28.694,-484.366,-509.922,-509.922,-509.922,-467.533,-414.46,-503.6 0|0:117:55,5,7,1,10,1,19,17:55:2193:5,7,1,10,1,19,17:199,254,37,393,31,758,691:-45.8701,-46.04,-225.137,-41.6997,-205.914,-220.193,-59.4001,-223.616,-219.273,-239.701,-30.1024,-194.319,-189.977,-207.678,-207.695,-59.9396,-224.155,-219.813,-237.514,-208.217,-240.24,0,-164.219,-159.877,-177.578,-148.282,-178.118,-174.886,-5.42498,-169.645,-165.303,-183.004,-153.708,-183.544,-123.607,-180.914 0|0:214:150,0,5,0,0,1,32,25:150:5907:0,5,0,0,1,32,25:0,204,0,0,40,1252,979:-57.7772,-102.932,-588.861,-86.0991,-572.029,-570.524,-102.932,-588.861,-572.029,-588.861,-102.932,-588.861,-572.029,-588.861,-588.861,-99.6365,-585.566,-568.734,-585.566,-585.566,-585.264,0,-485.927,-469.096,-485.927,-485.927,-482.632,-476.295,-22.4543,-508.382,-491.551,-508.382,-508.382,-505.087,-405.449,-500.857 0|1:269:194,4,0,26,27,0,3,13:194:7637:4,0,26,27,0,3,13:158,0,1006,1048,0,119,524:-27.6925,-73.0901,-700.097,-86.0924,-701.301,-714.303,-3.48239,-618.69,-631.692,-623.865,0,-615.208,-628.21,-545.6,-620.082,-86.0924,-701.301,-714.303,-631.692,-628.21,-714.303,-76.2964,-691.505,-704.507,-621.896,-618.414,-704.507,-703.604,-42.8986,-658.109,-671.111,-588.501,-585.019,-671.111,-661.316,-667.198 0|0:213:128,1,0,17,31,0,30,5:128:5057:1,0,17,31,0,30,5:40,0,655,1185,0,1196,202:-59.9579,-95.1945,-511.001,-98.4897,-511.302,-514.597,-44.7249,-457.537,-460.832,-455.715,-1.28826,-414.098,-417.393,-363.628,-408.061,-98.4897,-511.302,-514.597,-460.832,-417.393,-514.597,0,-412.816,-416.111,-362.346,-318.908,-416.111,-407.081,-81.8356,-494.649,-497.944,-444.179,-400.74,-497.944,-399.458,-496.439 dDocent_Contig_4596 12 . T A 8293.85 . AB=0.221126;ABP=1166.91;AC=4;AF=0.333333;AN=12;AO=381;CIGAR=1X3M1X;DP=2819;DPB=2819;DPRA=0.78604;EPP=830.341;EPPR=5271;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997527;PAO=0;PQA=0;PQR=0;PRO=0;QA=15051;QR=95797;RO=2426;RPL=0;RPP=830.341;RPPR=5271;RPR=381;RUN=1;SAF=381;SAP=830.341;SAR=0;SRF=2426;SRP=5271;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:428:367,59:367:14473:59:2336:-81.7698,0,-1172.99 0|1:441:233,206:233:9243:206:8139:-599.566,0,-698.833 0|1:319:289,29:289:11441:29:1159:-8.51599,0,-932.917 0|1:535:446,87:446:17614:87:3417:-146.755,0,-1423.16 0|0:447:444,0:444:17519:0:0:0,-133.657,-1575.07 0|0:649:647,0:647:25507:0:0:0,-194.766,-2293.39 dDocent_Contig_4597 35 . C T 3961.53 . AB=0.312245;ABP=153.046;AC=5;AF=0.416667;AN=12;AO=157;CIGAR=1X;DP=564;DPB=564;DPRA=0;EPP=343.931;EPPR=886.8;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.936306;PAIREDR=0.970516;PAO=0;PQA=0;PQR=0;PRO=0;QA=6291;QR=16326;RO=407;RPL=0;RPP=343.931;RPPR=886.8;RPR=157;RUN=1;SAF=157;SAP=343.931;SAR=0;SRF=407;SRP=886.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:49:40,9:40:1605:9:364:-18.3739,0,-129.931 0/1:102:88,14:88:3567:14:560:-20.0369,0,-290.333 0/1:72:52,20:52:2092:20:815:-51.9896,0,-166.783 0/0:74:70,4:70:2772:4:163:0,-7.21779,-234.525 0/1:115:69,46:69:2772:46:1828:-130.109,0,-214.969 0/1:152:88,64:88:3518:64:2561:-184.865,0,-270.878 dDocent_Contig_4598 98 . N T 264.405 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=279;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:20:-1.99996,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:107:-9.98217,-0.90309,0 1/1:5:0,5:0:0:5:152:-13.9788,-1.50515,0 dDocent_Contig_4599 17 . T C 136.393 . AB=0.0936255;ABP=723.074;AC=1;AF=0.0833333;AN=12;AO=78;CIGAR=1X;DP=2804;DPB=2804;DPRA=1.10037;EPP=172.385;EPPR=5920.27;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.987179;PAIREDR=0.992661;PAO=0;PQA=0;PQR=0;PRO=0;QA=3066;QR=104941;RO=2725;RPL=0;RPP=172.385;RPPR=5920.27;RPR=78;RUN=1;SAF=78;SAP=172.385;SAR=0;SRF=2725;SRP=5920.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:504:481,23:481:18422:23:905:0,-69.959,-1575.11 0/1:502:455,47:455:17587:47:1845:-15.1622,0,-1430.63 0/0:463:455,8:455:17626:8:316:0,-110.571,-1556.38 0/0:647:647,0:647:24763:0:0:0,-194.766,-2227.01 0/0:368:367,0:367:14124:0:0:0,-110.478,-1270 0/0:320:320,0:320:12419:0:0:0,-96.3296,-1117.04 dDocent_Contig_4600 13 . T C 5408.07 . AB=0.460396;ABP=8.51423;AC=6;AF=0.5;AN=12;AO=186;CIGAR=1X;DP=404;DPB=404;DPRA=0;EPP=406.904;EPPR=474.22;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.994624;PAIREDR=0.995392;PAO=0;PQA=0;PQR=0;PRO=0;QA=7465;QR=8306;RO=217;RPL=0;RPP=406.904;RPPR=474.22;RPR=186;RUN=1;SAF=186;SAP=406.904;SAR=0;SRF=217;SRP=474.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:108:48,60:48:1840:60:2400:-183.63,0,-133.334 0/1:85:47,38:47:1805:38:1521:-111.54,0,-137.107 0/1:81:40,40:40:1537:40:1600:-120.032,0,-114.395 0/1:78:39,39:39:1490:39:1576:-118.586,0,-110.889 0/1:27:23,4:23:880:4:164:-7.02209,0,-71.3864 0/1:25:20,5:20:754:5:204:-11.2183,0,-60.6519 dDocent_Contig_4601 69 . A G 518.974 . AB=0.217054;ABP=92.714;AC=3;AF=0.25;AN=12;AO=32;CIGAR=1X;DP=251;DPB=251;DPRA=1.34559;EPP=72.4974;EPPR=478.563;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.4375;PAIREDR=0.6621;PAO=0;PQA=0;PQR=0;PRO=0;QA=1201;QR=7826;RO=219;RPL=22;RPP=12.7819;RPPR=16.5845;RPR=10;RUN=1;SAF=22;SAP=12.7819;SAR=10;SRF=128;SRP=16.5845;SRR=91;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:31,0:31:1090:0:0:0,-9.33193,-98.388 0/0:54:50,4:50:1751:4:147:0,-2.66769,-144.244 0/1:29:26,3:26:925:3:120:-2.45782,0,-74.8208 0/0:37:37,0:37:1333:0:0:0,-11.1381,-120.249 0/1:50:31,19:31:1147:19:713:-49.4447,0,-88.4701 0/1:50:44,6:44:1580:6:221:-5.19211,0,-127.412 dDocent_Contig_4602 38 . A G 2004.15 . AB=0.206544;ABP=368.781;AC=6;AF=0.5;AN=12;AO=101;CIGAR=1X;DP=489;DPB=489;DPRA=0;EPP=222.329;EPPR=845.542;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.950495;PAIREDR=0.840206;PAO=0;PQA=0;PQR=0;PRO=0;QA=3963;QR=14816;RO=388;RPL=0;RPP=222.329;RPPR=845.542;RPR=101;RUN=1;SAF=101;SAP=222.329;SAR=0;SRF=388;SRP=845.542;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:62:49,13:49:1887:13:503:-26.9484,0,-151.398 0/1:65:43,22:43:1634:22:856:-57.7764,0,-127.749 0/1:66:60,6:60:2278:6:237:-1.83334,0,-185.347 0/1:111:89,22:89:3360:22:858:-44.1165,0,-269.1 0/1:75:54,21:54:2070:21:844:-53.6914,0,-163.929 0/1:110:93,17:93:3587:17:665:-27.0576,0,-289.812 dDocent_Contig_4603 1 . N C 1432.26 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=39;CIGAR=1X;DP=39;DPB=39;DPRA=0;EPP=87.6977;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1581;QR=0;RO=0;RPL=0;RPP=87.6977;RPPR=0;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:29:0,29:0:0:29:1176:-106.115,-8.72987,0 1/1:10:0,10:0:0:10:405:-36.81,-3.0103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_4604 1 . N G 75.9266 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=80;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:80:-7.59157,-0.60206,0 dDocent_Contig_4605 37 . G A 1588.28 . AB=0.200957;ABP=327.692;AC=2;AF=0.166667;AN=12;AO=85;CIGAR=1X;DP=1070;DPB=1070;DPRA=1.13573;EPP=187.585;EPPR=2141.91;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996954;PAO=0;PQA=0;PQR=0;PRO=0;QA=3231;QR=38825;RO=985;RPL=0;RPP=187.585;RPPR=2141.91;RPR=85;RUN=1;SAF=85;SAP=187.585;SAR=0;SRF=985;SRP=2141.91;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:151:150,1:150:5961:1:38:0,-41.6583,-532.464 0/0:160:160,0:160:6355:0:0:0,-48.1648,-571.689 0/0:92:92,0:92:3640:0:0:0,-27.6948,-327.632 0/0:249:249,0:249:9794:0:0:0,-74.9565,-880.86 0/1:218:185,33:185:7380:33:1254:-47.5147,0,-598.22 0/1:200:149,51:149:5695:51:1939:-114.535,0,-452.161 dDocent_Contig_4606 10 . T C 841.542 . AB=0.208333;ABP=144.88;AC=2;AF=0.166667;AN=12;AO=49;CIGAR=1X;DP=480;DPB=480;DPRA=1.56897;EPP=109.412;EPPR=936.743;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1969;QR=16758;RO=430;RPL=0;RPP=109.412;RPPR=936.743;RPR=49;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=430;SRP=936.743;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:63:59,4:59:2294:4:161:0,-4.08961,-191.765 0/1:108:86,22:86:3366:22:881:-47.0866,0,-270.524 0/1:84:66,18:66:2568:18:725:-40.2894,0,-205.999 0/0:109:104,5:104:4030:5:202:0,-14.2508,-344.175 0/0:76:76,0:76:2982:0:0:0,-22.8783,-268.498 0/0:40:39,0:39:1518:0:0:0,-11.7402,-136.479 dDocent_Contig_4607 19 . G A 161.327 . AB=0.192308;ABP=45.7716;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=124;DPB=124;DPRA=1.44444;EPP=24.725;EPPR=250.558;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8421;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.894737;PAO=0;PQA=0;PQR=0;PRO=0;QA=379;QR=4463;RO=114;RPL=0;RPP=24.725;RPPR=250.558;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=114;SRP=250.558;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:482:0:0:0,-3.61236,-43.6995 0/0:15:15,0:15:579:0:0:0,-4.51545,-52.4426 0/0:11:11,0:11:432:0:0:0,-3.31133,-39.2346 0/0:34:34,0:34:1338:0:0:0,-10.235,-120.661 0/1:32:24,8:24:923:8:299:-17.6295,0,-73.7471 0/1:20:18,2:18:709:2:80:-1.57119,0,-58.1163 dDocent_Contig_4608 98 . N C 3443.9 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=115;CIGAR=1X;DP=116;DPB=116;DPRA=0;EPP=252.73;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3802;QR=0;RO=0;RPL=115;RPP=252.73;RPPR=0;RPR=0;RUN=1;SAF=115;SAP=252.73;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:35:-3.32487,-0.60206,0 1/1:3:0,3:0:0:3:98:-9.14405,-0.90309,0 1/1:1:0,1:0:0:1:10:-0.999996,-0.30103,0 1/1:3:0,3:0:0:3:84:-7.83873,-0.90309,0 1/1:56:0,55:0:0:55:1858:-167.416,-16.5567,0 1/1:51:0,51:0:0:51:1717:-154.814,-15.3525,0 dDocent_Contig_4609 98 . N A 3741.41 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=127;CIGAR=2X;DP=130;DPB=178;DPRA=0;EPP=278.787;EPPR=0;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=0;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=0.984252;PAIREDR=0;PAO=48;PQA=1557.5;PQR=0;PRO=0;QA=4191;QR=0;RO=0;RPL=127;RPP=278.787;RPPR=0;RPR=0;RUN=1;SAF=127;SAP=278.787;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:24:0,2,22:0:0:2,22:67,709:-63.3955,-57.9715,-57.3694,-6.62266,-1.28287,0 1|1:27:0,0,27:0:0:0,27:0,901:-80.9943,-80.9943,-80.9943,-8.12781,-8.12781,0 1|1:4:0,0,4:0:0:0,4:0,136:-12.3955,-12.3955,-12.3955,-1.20412,-1.20412,0 1|1:27:0,0,27:0:0:0,27:0,910:-80.3324,-80.3324,-80.3324,-8.12781,-8.12781,0 1|1:26:0,0,26:0:0:0,26:0,853:-76.3228,-76.3228,-76.3228,-7.82678,-7.82678,0 1|1:22:0,1,21:0:0:1,21:33,682:-59.9223,-57.2572,-56.9561,-6.32163,-3.32353,0 dDocent_Contig_4611 152 . A G 646.133 . AB=0.115702;ABP=779.087;AC=3;AF=0.25;AN=12;AO=79;CIGAR=1X;DP=1592;DPB=1592;DPRA=0.448749;EPP=174.557;EPPR=3275.42;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998673;PAO=0;PQA=0;PQR=0;PRO=0;QA=3129;QR=58588;RO=1507;RPL=0;RPP=174.557;RPPR=3275.42;RPR=79;RUN=1;SAF=0;SAP=174.557;SAR=79;SRF=0;SRP=3275.42;SRR=1507;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:148:138,9:138:5304:9:345:0,-13.1941,-445.869 0/1:234:211,22:211:8147:22:878:-9.03227,0,-662.588 0/1:118:100,18:100:3932:18:700:-27.7999,0,-318.376 0/1:253:221,30:221:8590:30:1206:-33.0029,0,-696.883 0/0:428:427,0:427:16598:0:0:0,-128.54,-1492.4 0/0:411:410,0:410:16017:0:0:0,-123.422,-1440.33 dDocent_Contig_4612 50 . G A 51.2572 . AB=0.1875;ABP=16.582;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=76;DPB=76;DPRA=1.30435;EPP=11.6962;EPPR=159.356;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0.819444;PAO=0;PQA=0;PQR=0;PRO=0;QA=161;QR=2864;RO=72;RPL=4;RPP=11.6962;RPPR=159.356;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=72;SRP=159.356;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:556:0:0:0,-4.21442,-50.3759 0/1:16:13,3:13:498:3:123:-6.64831,0,-40.3362 0/0:14:14,0:14:566:0:0:0,-4.21442,-51.2826 0/0:14:13,1:13:512:1:38:0,-0.417151,-42.6294 0/0:7:7,0:7:284:0:0:0,-2.10721,-25.934 0/0:11:11,0:11:448:0:0:0,-3.31133,-40.676 dDocent_Contig_4613 13 . A G 3713.09 . AB=0.184038;ABP=926.506;AC=6;AF=0.5;AN=12;AO=196;CIGAR=1X;DP=1065;DPB=1065;DPRA=0;EPP=428.619;EPPR=1890.02;GTI=0;LEN=1;MEANALT=1;MQM=59.8265;MQMR=59.9827;NS=6;NUMALT=1;ODDS=0;PAIRED=0.994898;PAIREDR=0.993096;PAO=0;PQA=0;PQR=0;PRO=0;QA=7799;QR=33312;RO=869;RPL=0;RPP=428.619;RPPR=1890.02;RPR=196;RUN=1;SAF=196;SAP=428.619;SAR=0;SRF=869;SRP=1890.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:105:78,27:78:2898:27:1067:-64.7127,0,-229.365 0/1:180:149,31:149:5733:31:1230:-56.7895,0,-461.677 0/1:185:130,55:130:4946:55:2183:-140.955,0,-389.442 0/1:165:126,39:126:4789:39:1555:-90.1409,0,-381.337 0/1:212:190,22:190:7410:22:879:-15.5987,0,-602.704 0/1:218:196,22:196:7536:22:885:-14.3343,0,-612.343 dDocent_Contig_4614 12 . A T 1095.64 . AB=0.137221;ABP=669.459;AC=2;AF=0.166667;AN=12;AO=107;CIGAR=1X;DP=2004;DPB=2004;DPRA=0.887812;EPP=235.358;EPPR=4122.29;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.990654;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4285;QR=75207;RO=1897;RPL=0;RPP=235.358;RPPR=4122.29;RPR=107;RUN=1;SAF=107;SAP=235.358;SAR=0;SRF=1897;SRP=4122.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:202:177,25:177:6971:25:1001:-29.5765,0,-566.282 0/0:290:277,13:277:10971:13:518:0,-40.3316,-939.701 0/0:409:395,14:395:15670:14:569:0,-71.569,-1357.59 0/1:381:326,55:326:12922:55:2197:-83.2096,0,-1047.4 0/0:308:308,0:308:12193:0:0:0,-92.7172,-1096.53 0/0:414:414,0:414:16480:0:0:0,-124.626,-1481.92 dDocent_Contig_4615 18 . T C 9429.37 . AB=0.211295;ABP=1490.05;AC=6;AF=0.5;AN=12;AO=434;CIGAR=1X;DP=2054;DPB=2054;DPRA=0;EPP=945.429;EPPR=3518.62;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998147;PAO=0;PQA=0;PQR=0;PRO=0;QA=17465;QR=64839;RO=1619;RPL=0;RPP=945.429;RPPR=3518.62;RPR=434;RUN=1;SAF=434;SAP=945.429;SAR=0;SRF=1619;SRP=3518.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:251:172,79:172:6833:79:3193:-211.863,0,-539.119 0/1:360:265,95:265:10626:95:3804:-233.982,0,-847.25 0/1:403:330,73:330:13270:73:2957:-144.89,0,-1071.96 0/1:360:243,116:243:9752:116:4636:-308.888,0,-768.793 0/1:346:307,39:307:12264:39:1588:-38.9898,0,-998.71 0/1:334:302,32:302:12094:32:1287:-15.5463,0,-987.03 dDocent_Contig_4616 22 . G C 3895.47 . AB=0.179839;ABP=1107.02;AC=4;AF=0.333333;AN=12;AO=250;CIGAR=1X;DP=1709;DPB=1709;DPRA=0;EPP=545.878;EPPR=3169.02;GTI=0;LEN=1;MEANALT=1.16667;MQM=55.22;MQMR=54.9554;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0.96;PAIREDR=0.904664;PAO=0;PQA=0;PQR=0;PRO=0;QA=10031;QR=58027;RO=1458;RPL=0;RPP=545.878;RPPR=3169.02;RPR=250;RUN=1;SAF=250;SAP=545.878;SAR=0;SRF=1458;SRP=3169.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:117:107,10:107:4237:10:404:0,-5.10592,-351.178 0/1:155:130,25:130:5162:25:1017:-19.0143,0,-417.781 0/1:158:134,24:134:5382:24:952:-28.8354,0,-436.094 0/0:352:335,17:335:13300:17:682:0,-46.6775,-1136.73 0/1:430:338,92:338:13448:92:3707:-204.18,0,-1044.09 0/1:497:414,82:414:16498:82:3269:-144.739,0,-1300.73 dDocent_Contig_4617 14 . A C 479.365 . AB=0.109155;ABP=756.664;AC=1;AF=0.0833333;AN=12;AO=99;CIGAR=1X;DP=3833;DPB=3833;DPRA=0.953619;EPP=217.986;EPPR=8102.6;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3904;QR=147788;RO=3730;RPL=0;RPP=217.986;RPPR=8102.6;RPR=99;RUN=1;SAF=99;SAP=217.986;SAR=0;SRF=3730;SRP=8102.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:568:505,62:505:20050:62:2443:-49.1583,0,-1632.04 0/0:759:738,20:738:29281:20:790:0,-157.146,-2561.35 0/0:544:526,17:526:20691:17:671:0,-103.138,-1799.87 0/0:829:828,0:828:32906:0:0:0,-249.253,-2958.31 0/0:591:591,0:591:23368:0:0:0,-177.909,-2101.22 0/0:542:542,0:542:21492:0:0:0,-163.158,-1932.54 dDocent_Contig_4618 98 . N C 172.575 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=168;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 1/1:1:0,1:0:0:1:11:-1.09999,-0.30103,0 1/1:2:0,2:0:0:2:65:-6.17345,-0.60206,0 dDocent_Contig_4619 10 . T C 185.48 . AB=0.114833;ABP=272.325;AC=3;AF=0.25;AN=12;AO=30;CIGAR=1X;DP=355;DPB=355;DPRA=0;EPP=68.1545;EPPR=706.567;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.533333;PAIREDR=0.515432;PAO=0;PQA=0;PQR=0;PRO=0;QA=1181;QR=12375;RO=324;RPL=0;RPP=68.1545;RPPR=706.567;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=324;SRP=706.567;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:67:64,2:64:2432:2:71:0,-13.5198,-212.323 0/1:86:76,10:76:2931:10:395:-10.0165,0,-238.038 0/0:52:50,2:50:1925:2:81:0,-7.96783,-165.797 0/1:55:48,7:48:1828:7:278:-8.8326,0,-148.211 0/0:27:25,2:25:968:2:78:0,-0.724509,-80.0262 0/1:68:61,7:61:2291:7:278:-4.92049,0,-185.925 dDocent_Contig_4620 1 . N G 74.9833 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=79;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:79:-7.49724,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_4621 9 . G A 146.569 . AB=0.119718;ABP=181.377;AC=1;AF=0.0833333;AN=12;AO=27;CIGAR=1X;DP=705;DPB=705;DPRA=1.42233;EPP=61.6401;EPPR=1475.27;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995575;PAO=0;PQA=0;PQR=0;PRO=0;QA=1031;QR=25777;RO=678;RPL=0;RPP=61.6401;RPPR=1475.27;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=678;SRP=1475.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:80:80,0:80:3031:0:0:0,-24.0824,-272.958 0/0:122:122,0:122:4643:0:0:0,-36.7257,-417.922 0/0:75:75,0:75:2827:0:0:0,-22.5772,-254.61 0/0:135:135,0:135:5161:0:0:0,-40.639,-464.505 0/0:151:141,10:141:5367:10:380:0,-10.9025,-448.467 0/1:142:125,17:125:4748:17:651:-16.1798,0,-384.622 dDocent_Contig_4622 54 . G T 78.1071 . AB=0.145833;ABP=55.3066;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=343;DPB=343;DPRA=1.18137;EPP=37.7539;EPPR=710.91;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5625;PAIREDR=0.601227;PAO=0;PQA=0;PQR=0;PRO=0;QA=594;QR=12648;RO=326;RPL=16;RPP=37.7539;RPPR=710.91;RPR=0;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=326;SRP=710.91;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:48:41,7:41:1565:7:257:-9.03256,0,-126.64 0/0:68:66,2:66:2571:2:78:0,-13.0666,-224.135 0/0:48:45,3:45:1780:3:113:0,-3.91047,-149.878 0/0:77:73,4:73:2774:4:146:0,-9.68273,-236.281 0/0:48:48,0:48:1847:0:0:0,-14.4494,-166.447 0/0:54:53,0:53:2111:0:0:0,-15.9546,-189.774 dDocent_Contig_4623 7 . A C 370.636 . AB=0.236559;ABP=59.0716;AC=3;AF=0.25;AN=12;AO=28;CIGAR=1X;DP=172;DPB=172;DPRA=0;EPP=55.4358;EPPR=307.077;GTI=0;LEN=1;MEANALT=1;MQM=47.4286;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.107143;PAIREDR=0.958333;PAO=0;PQA=0;PQR=0;PRO=0;QA=1085;QR=5517;RO=144;RPL=0;RPP=63.8115;RPPR=315.702;RPR=28;RUN=1;SAF=27;SAP=55.4358;SAR=1;SRF=143;SRP=307.077;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:24,2:24:914:2:78:0,-0.533395,-75.2801 0/1:42:34,8:34:1297:8:309:-12.6872,0,-104.374 0/0:20:18,2:18:693:2:78:0,-0.0906316,-56.7744 0/1:23:17,6:17:652:6:231:-11.8183,0,-52.0918 0/0:33:31,2:31:1201:2:78:0,-2.65345,-101.105 0/1:28:20,8:20:760:8:311:-17.779,0,-60.298 dDocent_Contig_4625 19 . C T 55.0888 . AB=0.131579;ABP=47.8112;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X1M1X;DP=208;DPB=208;DPRA=1.10448;EPP=16.0391;EPPR=441.648;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.955446;PAO=0;PQA=0;PQR=0;PRO=0;QA=241;QR=8002;RO=202;RPL=0;RPP=16.0391;RPPR=441.648;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=202;SRP=441.648;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:26:26,0:26:1039:0:0:0,-7.82678,-93.8059 0|0:33:33,0:33:1322:0:0:0,-9.93399,-119.247 0|0:36:35,1:35:1385:1:40:0,-6.8414,-120.913 0|0:41:41,0:41:1617:0:0:0,-12.3422,-145.767 0|1:38:33,5:33:1292:5:201:-7.03175,0,-105.111 0|0:34:34,0:34:1347:0:0:0,-10.235,-121.497 dDocent_Contig_4626 50 . T A 174.436 . AB=0.111111;ABP=298.572;AC=1;AF=0.0833333;AN=12;AO=28;CIGAR=1X;DP=1107;DPB=1107;DPRA=1.42724;EPP=63.8115;EPPR=2346.03;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1077;QR=40155;RO=1079;RPL=28;RPP=63.8115;RPPR=2346.03;RPR=0;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=1079;SRP=2346.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:134:134,0:134:5023:0:0:0,-40.338,-452.079 0/0:187:187,0:187:6885:0:0:0,-56.2926,-619.541 0/0:116:116,0:116:4334:0:0:0,-34.9195,-390.115 0/0:209:209,0:209:7806:0:0:0,-62.9153,-702.349 0/0:236:233,3:233:8678:3:117:0,-60.1338,-769.874 0/1:225:200,25:200:7429:25:960:-18.9665,0,-600.723 dDocent_Contig_4627 15 . G A 175.462 . AB=0.209302;ABP=34.5724;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=146;DPB=146;DPRA=0.931373;EPP=26.8965;EPPR=296.159;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.818182;PAIREDR=0.681481;PAO=0;PQA=0;PQR=0;PRO=0;QA=444;QR=5401;RO=135;RPL=0;RPP=26.8965;RPPR=296.159;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=135;SRP=296.159;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:14:12,2:12:474:2:81:-3.47131,0,-38.789 0/0:29:28,1:28:1123:1:40:0,-4.73419,-97.3547 0/0:23:22,1:22:869:1:38:0,-3.12642,-74.7181 0/0:20:20,0:20:789:0:0:0,-6.0206,-71.3284 0/0:31:31,0:31:1253:0:0:0,-9.33193,-113.036 0/1:29:22,7:22:893:7:285:-17.2943,0,-71.9468 dDocent_Contig_4628 10 . T A 24255.9 . AB=0.643436;ABP=223.529;AC=6;AF=0.5;AN=12;AO=794;CIGAR=1X;DP=1234;DPB=1234;DPRA=0;EPP=1727.16;EPPR=936.743;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.994962;PAIREDR=0.993023;PAO=0;PQA=0;PQR=0;PRO=0;QA=31190;QR=16635;RO=430;RPL=0;RPP=1727.16;RPPR=936.743;RPR=794;RUN=1;SAF=794;SAP=1727.16;SAR=0;SRF=430;SRP=936.743;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:167:43,124:43:1659:124:4915:-392.002,0,-99.2879 0/1:304:60,238:60:2322:238:9333:-749.374,0,-119.058 0/1:141:85,55:85:3314:55:2192:-154.902,0,-255.811 0/1:278:96,179:96:3728:179:7054:-551.387,0,-252.401 0/1:114:50,64:50:1919:64:2496:-190.479,0,-138.613 0/1:230:96,134:96:3693:134:5200:-398.665,0,-263.213 dDocent_Contig_4629 44 . C A 16497.6 . AB=0.405478;ABP=119.183;AC=6;AF=0.5;AN=12;AO=607;CIGAR=1X;DP=1497;DPB=1497;DPRA=0;EPP=1321.09;EPPR=1935.62;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=23459;QR=35146;RO=890;RPL=0;RPP=1321.09;RPPR=1935.62;RPR=607;RUN=1;SAF=607;SAP=1321.09;SAR=0;SRF=890;SRP=1935.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:208:127,81:127:4981:81:3095:-216.056,0,-385.614 0/1:284:146,138:146:5718:138:5326:-393.777,0,-428.995 0/1:126:72,54:72:2839:54:2101:-151.372,0,-217.714 0/1:284:202,82:202:8025:82:3188:-201.543,0,-636.373 0/1:249:136,113:136:5383:113:4383:-319.523,0,-409.407 0/1:346:207,139:207:8200:139:5366:-378.714,0,-633.468 dDocent_Contig_4630 18 . T G 68921.1 . AB=0.463642;ABP=60.9603;AC=6;AF=0.5;AN=12;AO=2340;CIGAR=1X4M;DP=5047;DPB=5047;DPRA=0;EPP=5084.26;EPPR=4962.65;GTI=0;LEN=1;MEANALT=5.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=92271;QR=89451;RO=2284;RPL=0;RPP=5084.26;RPPR=4962.65;RPR=2340;RUN=1;SAF=2340;SAP=5084.26;SAR=0;SRF=2284;SRP=4962.65;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:610:147,52,409:147:5743:52,409:2033,16047:-1275.31,-1152.42,-1608.87,0,-304.966,-348.982 0|1:786:237,160,379:237:9350:160,379:6264,14923:-1156.19,-712.492,-1433.62,0,-254.248,-655.202 0|1:727:287,62,375:287:11229:62,375:2431,14818:-1132.85,-1019.34,-1923.87,0,-723.291,-810.312 0|1:938:476,6,452:476:18654:6,452:235,17895:-1329.39,-1453.36,-2985.46,0,-1514.61,-1397.86 0|1:885:580,24,280:580:22677:24,280:939,11050:-734.521,-831.917,-2688.99,0,-1787.09,-1780.01 0|1:1101:557,84,445:557:21798:84,445:3290,17538:-1275.08,-1172.24,-2939.14,0,-1521.68,-1658.23 dDocent_Contig_4632 133 . A T 82.0269 . AB=0.126761;ABP=88.9211;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=245;DPB=245;DPRA=0.76259;EPP=24.725;EPPR=513.306;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.825532;PAO=0;PQA=0;PQR=0;PRO=0;QA=387;QR=8685;RO=235;RPL=0;RPP=24.725;RPPR=513.306;RPR=10;RUN=1;SAF=0;SAP=24.725;SAR=10;SRF=0;SRP=513.306;SRR=235;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:42:42,0:42:1536:0:0:0,-12.6433,-138.521 0/1:38:32,6:32:1213:6:231:-9.71877,0,-98.0271 0/0:35:34,1:34:1215:1:39:0,-6.63949,-105.743 0/1:33:30,3:30:1126:3:117:-0.976391,0,-91.7123 0/0:68:68,0:68:2526:0:0:0,-20.47,-227.555 0/0:29:29,0:29:1069:0:0:0,-8.72987,-96.5217 dDocent_Contig_4633 98 . N A 375.015 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=13;CIGAR=1X;DP=13;DPB=13;DPRA=0;EPP=31.2394;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=393;QR=0;RO=0;RPL=13;RPP=31.2394;RPPR=0;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:105:-9.79616,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:2:0,2:0:0:2:46:-4.36869,-0.60206,0 1/1:1:0,1:0:0:1:20:-1.99996,-0.30103,0 1/1:6:0,6:0:0:6:187:-17.137,-1.80618,0 dDocent_Contig_4634 16 . G C 550.972 . AB=0.208;ABP=95.5845;AC=1;AF=0.0833333;AN=12;AO=39;CIGAR=1X;DP=804;DPB=804;DPRA=0.811321;EPP=87.6977;EPPR=1664.19;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.975163;PAO=0;PQA=0;PQR=0;PRO=0;QA=1565;QR=30733;RO=765;RPL=0;RPP=87.6977;RPPR=1664.19;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=765;SRP=1664.19;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:104:103,1:103:4117:1:41:0,-27.2126,-366.405 0/1:125:99,26:99:3967:26:1044:-56.6201,0,-319.382 0/0:99:95,4:95:3834:4:160:0,-15.0191,-330.26 0/0:113:109,4:109:4387:4:162:0,-19.0494,-379.787 0/0:159:159,0:159:6394:0:0:0,-47.8638,-575.175 0/0:204:200,4:200:8034:4:158:0,-46.8108,-708.006 dDocent_Contig_4635 10 . T A 29841 . AB=0.379394;ABP=365.992;AC=6;AF=0.5;AN=12;AO=1090;CIGAR=1X;DP=2873;DPB=2873;DPRA=0;EPP=2369.92;EPPR=3870.4;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998165;PAIREDR=0.998877;PAO=0;PQA=0;PQR=0;PRO=0;QA=42909;QR=69421;RO=1781;RPL=0;RPP=2369.92;RPPR=3870.4;RPR=1090;RUN=1;SAF=1090;SAP=2369.92;SAR=0;SRF=1781;SRP=3870.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:266:167,99:167:6471:99:3897:-270.664,0,-502.128 0/1:405:191,212:191:7438:212:8274:-622.537,0,-547.405 0/1:269:205,64:205:8038:64:2516:-145.612,0,-642.104 0/1:304:226,78:226:8849:78:3101:-187.668,0,-704.479 0/1:816:531,285:531:20615:285:11224:-763.805,0,-1608.29 0/1:813:461,352:461:18010:352:13897:-1005.03,0,-1374.95 dDocent_Contig_4636 41 . G C 47492.6 . AB=0.388056;ABP=475.077;AC=6;AF=0.5;AN=12;AO=1683;CIGAR=2X;DP=4337;DPB=4337;DPRA=0;EPP=3657.6;EPPR=5750.9;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.992276;PAIREDR=0.997355;PAO=0;PQA=0;PQR=0;PRO=0;QA=67453;QR=105027;RO=2647;RPL=0;RPP=3657.6;RPPR=5750.9;RPR=1683;RUN=1;SAF=1683;SAP=3657.6;SAR=0;SRF=2647;SRP=5750.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:568:421,145:421:16606:145:5819:-352.813,0,-1322.62 0|1:794:490,303:490:19446:303:12173:-855.562,0,-1509.47 0|1:461:281,179:281:11206:179:7155:-504.762,0,-868.958 0|1:829:547,281:547:21756:281:11219:-759.458,0,-1706.74 0|1:780:370,409:370:14701:409:16439:-1243.24,0,-1087.1 0|1:905:538,366:538:21312:366:14648:-1044.65,0,-1643.81 dDocent_Contig_4637 15 . G A 4628.17 . AB=0.137529;ABP=2940.45;AC=4;AF=0.333333;AN=12;AO=388;CIGAR=1X;DP=3253;DPB=3253;DPRA=0;EPP=845.542;EPPR=6222.11;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=59.9832;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998603;PAO=0;PQA=0;PQR=0;PRO=0;QA=15150;QR=113640;RO=2864;RPL=0;RPP=845.542;RPPR=6222.11;RPR=388;RUN=1;SAF=388;SAP=845.542;SAR=0;SRF=2864;SRP=6222.11;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:289:267,22:267:10637:22:852:0,-10.0081,-879.645 0/0:390:378,12:378:14956:12:468:0,-74.9333,-1302.43 0/1:509:419,90:419:16586:90:3485:-160.494,0,-1338.2 0/1:570:519,50:519:20642:50:1965:-5.38018,0,-1684.37 0/1:804:693,111:693:27442:111:4323:-147.037,0,-2224.9 0/1:691:588,103:588:23377:103:4057:-157.127,0,-1893.89 dDocent_Contig_4639 82 . G A 8526.85 . AB=0.236658;ABP=1120.39;AC=4;AF=0.333333;AN=12;AO=514;CIGAR=1X;DP=2900;DPB=2900;DPRA=0;EPP=1119.15;EPPR=5179.8;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=59.9891;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997903;PAO=0;PQA=0;PQR=0;PRO=0;QA=18460;QR=80337;RO=2384;RPL=514;RPP=1119.15;RPPR=5179.8;RPR=0;RUN=1;SAF=514;SAP=1119.15;SAR=0;SRF=2384;SRP=5179.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:443:409,34:409:13736:34:1211:0,-24.0672,-1126.87 0/1:502:439,63:439:14731:63:2242:-50.9168,0,-1174.56 0/1:260:233,27:233:7911:27:993:-11.4192,0,-633.808 0/0:602:560,41:560:18917:41:1498:0,-46.1769,-1567.17 0/1:545:409,136:409:13853:136:4910:-277.964,0,-1082.62 0/1:548:334,213:334:11189:213:7606:-519.607,0,-841.521 dDocent_Contig_4640 18 . A T 274.214 . AB=0.098646;ABP=726.379;AC=1;AF=0.0833333;AN=12;AO=64;CIGAR=1X;DP=2770;DPB=2770;DPRA=1.08463;EPP=141.985;EPPR=5872.5;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.9963;PAO=0;PQA=0;PQR=0;PRO=0;QA=2570;QR=107894;RO=2703;RPL=0;RPP=141.985;RPPR=5872.5;RPR=64;RUN=1;SAF=64;SAP=141.985;SAR=0;SRF=2703;SRP=5872.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:368:368,0:368:14651:0:0:0,-110.779,-1317.49 0/1:517:465,51:465:18451:51:2050:-28.9443,0,-1503.37 0/0:457:444,13:444:17761:13:520:0,-90.4256,-1549.89 0/0:477:477,0:477:19058:0:0:0,-143.591,-1713.63 0/0:363:363,0:363:14502:0:0:0,-109.274,-1304.06 0/0:588:586,0:586:23471:0:0:0,-176.404,-2110.1 dDocent_Contig_4641 8 . T A 1078.1 . AB=0.167082;ABP=389.05;AC=2;AF=0.166667;AN=12;AO=97;CIGAR=1X;DP=929;DPB=929;DPRA=2.45429;EPP=213.643;EPPR=1144.72;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.78219;PAO=0;PQA=0;PQR=0;PRO=0;QA=3715;QR=31455;RO=831;RPL=0;RPP=213.643;RPPR=1807.5;RPR=97;RUN=1;SAF=97;SAP=213.643;SAR=0;SRF=746;SRP=1144.72;SRR=85;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:155:114,40:114:4375:40:1541:-92.4368,0,-347.292 0/1:246:219,27:219:8282:27:1026:-18.5952,0,-671.139 0/0:184:169,15:169:6424:15:573:0,-3.47834,-526.181 0/0:191:178,13:178:6694:13:499:0,-12.2391,-557.123 0/0:70:70,0:70:2628:0:0:0,-21.0721,-236.72 0/0:83:81,2:81:3052:2:76:0,-17.7708,-267.631 dDocent_Contig_4642 10 . T C 116.73 . AB=0.0961538;ABP=371.325;AC=1;AF=0.0833333;AN=12;AO=59;CIGAR=1X;DP=1602;DPB=1602;DPRA=1.17511;EPP=131.127;EPPR=3353.59;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2367;QR=60538;RO=1543;RPL=0;RPP=131.127;RPPR=3353.59;RPR=59;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=1543;SRP=3353.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:236:232,4:232:9095:4:163:0,-55.9846,-803.065 0/1:260:235,25:235:9213:25:1013:-13.1959,0,-750.441 0/0:324:302,22:302:11808:22:883:0,-17.7553,-982.261 0/0:258:253,5:253:9924:5:203:0,-59.0127,-873.99 0/0:233:233,0:233:9210:0:0:0,-70.14,-828.419 0/0:291:288,3:288:11288:3:105:0,-77.8089,-1005.49 dDocent_Contig_4643 50 . T C 203.133 . AB=0.121693;ABP=237.954;AC=2;AF=0.166667;AN=12;AO=35;CIGAR=1X;DP=621;DPB=621;DPRA=0.861538;EPP=79.0118;EPPR=1258.18;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994881;PAO=0;PQA=0;PQR=0;PRO=0;QA=1349;QR=23449;RO=586;RPL=35;RPP=79.0118;RPPR=1258.18;RPR=0;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=586;SRP=1275.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:73:65,8:65:2610:8:323:-7.46397,0,-213.04 0/1:116:101,15:101:3999:15:563:-16.0711,0,-324.986 0/0:78:74,4:74:2980:4:155:0,-9.15631,-253.952 0/0:88:82,6:82:3312:6:231:0,-5.33686,-276.971 0/0:149:147,2:147:5853:2:77:0,-37.5453,-519.251 0/0:117:117,0:117:4695:0:0:0,-35.2205,-422.448 dDocent_Contig_4644 8 . T C 2476.81 . AB=0.0421053;ABP=176.02;AC=0;AF=0;AN=12;AO=4;CIGAR=1X3M1X;DP=258;DPB=258;DPRA=1.03261;EPP=11.6962;EPPR=359.132;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.75;PAIREDR=0.5;PAO=0;PQA=0;PQR=0;PRO=0;QA=155;QR=6217;RO=164;RPL=0;RPP=11.6962;RPPR=359.132;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=164;SRP=359.132;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:34:20,0,14:20:748:0,14:0,555:-40.0593,-46.0799,-107.315,0,-61.6222,-57.4078 0|0:55:15,1,39:15:565:1,39:38,1563:-124.276,-125.675,-171.664,0,-43.177,-34.5536 0|0:40:18,3,19:18:689:3,19:117,741:-55.4798,-51.2807,-106.915,0,-46.9161,-50.8152 0|0:42:30,0,12:30:1135:0,12:0,480:-30.9081,-39.939,-132.966,0,-93.4202,-89.8078 0|0:41:35,0,5:35:1328:0,5:0,200:-6.18008,-16.7161,-125.631,0,-109.153,-107.648 0|0:46:46,0,0:46:1752:0,0:0,0:0,-13.8474,-157.94,-13.8474,-157.94,-157.94 dDocent_Contig_4645 18 . T A 39.5459 . AB=0.085034;ABP=1322.2;AC=1;AF=0.0833333;AN=12;AO=204;CIGAR=1X;DP=3621;DPB=3621;DPRA=0;EPP=445.991;EPPR=7418.59;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99795;PAO=0;PQA=0;PQR=0;PRO=0;QA=8102;QR=135797;RO=3415;RPL=0;RPP=445.991;RPPR=7418.59;RPR=204;RUN=1;SAF=204;SAP=445.991;SAR=0;SRF=3415;SRP=7418.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:431:422,9:422:16787:9:363:0,-96.7093,-1476.47 0/0:674:621,52:621:24862:52:2039:0,-19.3047,-2051.68 0/0:363:348,15:348:13833:15:605:0,-54.4857,-1189.15 0/1:882:807,75:807:32010:75:3010:-5.47742,0,-2612.51 0/0:493:468,24:468:18530:24:940:0,-63.6202,-1581.34 0/0:778:749,29:749:29775:29:1145:0,-130.866,-2573.77 dDocent_Contig_4646 32 . A C 1703.23 . AB=0.190578;ABP=391.369;AC=4;AF=0.333333;AN=12;AO=97;CIGAR=1X;DP=626;DPB=626;DPRA=0;EPP=213.643;EPPR=1151.72;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.948454;PAIREDR=0.992439;PAO=0;PQA=0;PQR=0;PRO=0;QA=3833;QR=20597;RO=529;RPL=0;RPP=213.643;RPPR=1151.72;RPR=97;RUN=1;SAF=97;SAP=213.643;SAR=0;SRF=529;SRP=1151.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:74:66,8:66:2563:8:318:-6.70918,0,-208.556 0/1:97:72,25:72:2830:25:988:-60.0221,0,-225.626 0/0:84:79,5:79:3064:5:191:0,-7.73243,-258.316 0/1:119:98,21:98:3795:21:833:-39.463,0,-305.765 0/0:75:72,3:72:2813:3:121:0,-11.2971,-242.027 0/1:177:142,35:142:5532:35:1382:-71.3508,0,-444.482 dDocent_Contig_4648 40 . A T 87.6033 . AB=0.0954357;ABP=345.625;AC=1;AF=0.0833333;AN=12;AO=24;CIGAR=1X;DP=556;DPB=556;DPRA=1.98566;EPP=55.1256;EPPR=1156.06;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=957;QR=21239;RO=531;RPL=0;RPP=55.1256;RPPR=1156.06;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=531;SRP=1156.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:65:64,0:64:2554:0:0:0,-19.2659,-229.9 0/0:63:63,0:63:2545:0:0:0,-18.9649,-229.177 0/0:34:34,0:34:1351:0:0:0,-10.235,-121.852 0/0:36:35,1:35:1394:1:40:0,-6.8414,-121.718 0/0:117:117,0:117:4665:0:0:0,-35.2205,-419.769 0/1:241:218,23:218:8730:23:917:-10.2832,0,-712.637 dDocent_Contig_4649 52 . G A 91.5256 . AB=0.104478;ABP=185.09;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=862;DPB=862;DPRA=0.573134;EPP=35.5824;EPPR=1842.25;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=603;QR=33488;RO=847;RPL=15;RPP=35.5824;RPPR=1842.25;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=847;SRP=1842.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:81:81,0:81:3181:0:0:0,-24.3834,-286.365 0/1:134:120,14:120:4721:14:563:-10.6754,0,-384.485 0/0:58:57,1:57:2271:1:40:0,-13.4641,-200.561 0/0:117:117,0:117:4526:0:0:0,-35.2205,-407.308 0/0:246:246,0:246:9750:0:0:0,-74.0534,-876.911 0/0:226:226,0:226:9039:0:0:0,-68.0328,-812.975 dDocent_Contig_4650 7 . A G 818.047 . AB=0.126738;ABP=1483.04;AC=1;AF=0.0833333;AN=12;AO=235;CIGAR=1X;DP=3532;DPB=3532;DPRA=3.36588;EPP=513.306;EPPR=7153.67;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7574;QR=126092;RO=3293;RPL=0;RPP=513.306;RPPR=7153.67;RPR=235;RUN=1;SAF=235;SAP=513.306;SAR=0;SRF=3293;SRP=7153.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:236:236,0:236:9021:0:0:0,-71.0431,-811.621 0/0:452:451,1:451:17251:1:34:0,-132.667,-1548.34 0/0:179:179,0:179:6853:0:0:0,-53.8844,-616.657 0/0:394:394,0:394:15079:0:0:0,-118.606,-1356.42 0/0:1048:967,79:967:37034:79:2529:0,-87.1924,-3102.96 0/1:1223:1066,155:1066:40854:155:5011:-83.3275,0,-3306.53 dDocent_Contig_4651 22 . G A 5686.96 . AB=0.251361;ABP=594.754;AC=4;AF=0.333333;AN=12;AO=281;CIGAR=1X;DP=2459;DPB=2459;DPRA=0.512754;EPP=613.194;EPPR=4730.31;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9968;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10225;QR=80023;RO=2177;RPL=0;RPP=613.194;RPPR=4730.31;RPR=281;RUN=1;SAF=281;SAP=613.194;SAR=0;SRF=2177;SRP=4730.31;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:207:158,49:158:5725:49:1770:-97.254,0,-452.982 0/1:276:224,52:224:8217:52:1911:-89.1656,0,-656.334 0/1:251:194,57:194:7145:57:2098:-113.509,0,-567.436 0/1:368:249,119:249:9167:119:4296:-275.99,0,-714.08 0/0:690:689,0:689:25249:0:0:0,-207.41,-2271.03 0/0:667:663,4:663:24520:4:150:0,-186.921,-2191.84 dDocent_Contig_4652 19 . G A 45157.3 . AB=0.864532;ABP=1877.45;AC=6;AF=0.5;AN=12;AO=1404;CIGAR=1X;DP=1624;DPB=1624;DPRA=0;EPP=3051.76;EPPR=478.563;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.996439;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=55766;QR=8777;RO=219;RPL=0;RPP=3051.76;RPPR=478.563;RPR=1404;RUN=1;SAF=1404;SAP=3051.76;SAR=0;SRF=219;SRP=478.563;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:186:42,144:42:1672:144:5720:-458.624,0,-94.7124 0/1:270:26,244:26:1058:244:9670:-788.445,0,-14.2286 0/1:116:15,101:15:601:101:4057:-330.179,0,-19.5061 0/1:298:46,252:46:1851:252:10037:-812.99,0,-77.0895 0/1:311:43,268:43:1712:268:10629:-862.293,0,-60.6809 0/1:443:47,395:47:1883:395:15653:-1274.42,0,-36.5169 dDocent_Contig_4653 98 . N T 112.773 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=111;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:18:-1.79997,-0.30103,0 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 1/1:3:0,3:0:0:3:64:-5.97256,-0.90309,0 dDocent_Contig_4654 18 . C G 33.2076 . AB=0.104167;ABP=68.3354;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=353;DPB=353;DPRA=0.238596;EPP=16.0391;EPPR=756.511;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=246;QR=13981;RO=347;RPL=0;RPP=16.0391;RPPR=756.511;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=347;SRP=756.511;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:20,3:20:787:3:123:-4.5411,0,-64.2235 0/0:20:19,1:19:773:1:41:0,-1.92603,-65.7943 0/1:25:23,2:23:933:2:82:-0.253928,0,-76.7453 0/0:19:19,0:19:766:0:0:0,-5.71957,-69.26 0/0:152:152,0:152:6129:0:0:0,-45.7566,-551.343 0/0:114:114,0:114:4593:0:0:0,-34.3174,-413.267 dDocent_Contig_4655 78 . A G 2086.99 . AB=0.243848;ABP=257.762;AC=6;AF=0.5;AN=12;AO=109;CIGAR=1X;DP=447;DPB=447;DPRA=0;EPP=239.701;EPPR=736.968;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.458716;PAIREDR=0.64497;PAO=0;PQA=0;PQR=0;PRO=0;QA=3915;QR=12234;RO=338;RPL=71;RPP=24.7051;RPPR=32.7171;RPR=38;RUN=1;SAF=71;SAP=24.7051;SAR=38;SRF=203;SRP=32.7171;SRR=135;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:63:42,21:42:1456:21:758:-49.5771,0,-112.325 0/1:91:73,18:73:2674:18:647:-31.1579,0,-213.442 0/1:48:32,16:32:1146:16:583:-38.3518,0,-88.9857 0/1:94:65,29:65:2359:29:1038:-65.422,0,-184.231 0/1:55:40,15:40:1482:15:551:-33.3653,0,-117.092 0/1:96:86,10:86:3117:10:338:-1.83854,0,-251.808 dDocent_Contig_4656 108 . T C 2790.42 . AB=0.273616;ABP=276.333;AC=4;AF=0.333333;AN=12;AO=193;CIGAR=1X;DP=1037;DPB=1037;DPRA=0;EPP=422.104;EPPR=1833.56;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994069;PAO=0;PQA=0;PQR=0;PRO=0;QA=6024;QR=27459;RO=843;RPL=0;RPP=422.104;RPPR=1833.56;RPR=193;RUN=1;SAF=0;SAP=422.104;SAR=193;SRF=0;SRP=1833.56;SRR=843;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:124:99,25:99:3171:25:800:-34.9715,0,-248.295 0/1:169:116,53:116:3745:53:1596:-93.0315,0,-286.397 0/1:92:74,18:74:2439:18:565:-23.4549,0,-192.073 0/1:229:157,72:157:5193:72:2261:-134.806,0,-398.616 0/0:198:193,5:193:6303:5:157:0,-45.1637,-552.981 0/0:225:204,20:204:6608:20:645:0,-9.40486,-536.507 dDocent_Contig_4657 18 . T G 1020.47 . AB=0.122293;ABP=975.744;AC=3;AF=0.25;AN=12;AO=103;CIGAR=1X3M1X;DP=2379;DPB=2379;DPRA=0.51234;EPP=226.672;EPPR=4917.05;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4080;QR=90023;RO=2263;RPL=0;RPP=226.672;RPPR=4917.05;RPR=103;RUN=1;SAF=103;SAP=226.672;SAR=0;SRF=2263;SRP=4917.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:217:195,21:195:7735:21:825:-9.4204,0,-630.65 0|1:299:258,38:258:10281:38:1518:-47.3546,0,-835.148 0|1:269:232,37:232:9164:37:1458:-50.4939,0,-743.286 0|0:419:410,7:410:16330:7:279:0,-100.424,-1442.99 0|0:566:564,0:564:22514:0:0:0,-169.781,-2023.99 0|0:609:604,0:604:23999:0:0:0,-181.822,-2157.58 dDocent_Contig_4658 7 . A C 35.9497 . AB=0.116667;ABP=79.5909;AC=3;AF=0.25;AN=12;AO=7;CIGAR=1X;DP=137;DPB=137;DPRA=0.779221;EPP=18.2106;EPPR=285.302;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.571429;PAIREDR=0.553846;PAO=0;PQA=0;PQR=0;PRO=0;QA=270;QR=4935;RO=130;RPL=0;RPP=18.2106;RPPR=285.302;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=130;SRP=285.302;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:36,0:36:1361:0:0:0,-10.8371,-122.776 0/1:20:18,2:18:679:2:76:-1.19407,0,-55.4156 0/1:19:16,3:16:613:3:116:-5.09813,0,-49.7891 0/0:28:28,0:28:1081:0:0:0,-8.42884,-97.5953 0/0:13:13,0:13:482:0:0:0,-3.91339,-43.7164 0/1:21:19,2:19:719:2:78:-1.08184,0,-58.7186 dDocent_Contig_4660 45 . G A 3305.68 . AB=0.571429;ABP=11.6962;AC=4;AF=0.333333;AN=12;AO=112;CIGAR=1X;DP=340;DPB=340;DPRA=0.680556;EPP=246.215;EPPR=498.106;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4396;QR=8925;RO=228;RPL=0;RPP=246.215;RPPR=498.106;RPR=112;RUN=1;SAF=112;SAP=246.215;SAR=0;SRF=228;SRP=498.106;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:17,6:17:661:6:241:-15.1432,0,-52.8925 0/1:39:9,30:9:358:30:1166:-93.4798,0,-20.842 0/1:46:10,36:10:390:36:1420:-114.208,0,-21.6028 0/1:88:48,40:48:1878:40:1569:-114.959,0,-142.735 0/0:34:34,0:34:1352:0:0:0,-10.235,-121.942 0/0:110:110,0:110:4286:0:0:0,-33.1133,-385.727 dDocent_Contig_4661 21 . T C 33.9231 . AB=0.117647;ABP=46.1843;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1M1X3M;DP=172;DPB=173.2;DPRA=1.23188;EPP=11.6962;EPPR=352.67;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.460606;PAO=0;PQA=0;PQR=0;PRO=0;QA=164;QR=6457;RO=165;RPL=0;RPP=11.6962;RPPR=361.303;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=164;SRP=352.67;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:26:26,0,0:26:1029:0,0:0,0:0,-7.82678,-92.9093,-7.82678,-92.9093,-92.9093 0|0:35:32,3,0:32:1237:3,0:105,0:0,-0.74345,-101.817,-9.63296,-102.72,-111.257 0|0:10:10,0,0:10:391:0,0:0,0:0,-3.0103,-35.5463,-3.0103,-35.5463,-35.5463 0|1:34:30,0,4:30:1169:0,4:0,164:-4.91488,-13.9458,-110.006,0,-96.4675,-95.2634 0|0:22:22,0,0:22:868:0,0:0,0:0,-6.62266,-78.4305,-6.62266,-78.4305,-78.4305 0|0:45:45,0,0:45:1763:0,0:0,0:0,-13.5463,-158.903,-13.5463,-158.903,-158.903 dDocent_Contig_4662 21 . T A 32768.1 . AB=0.591253;ABP=136.962;AC=6;AF=0.5;AN=12;AO=1095;CIGAR=1X2M1X;DP=1852;DPB=1852;DPRA=0;EPP=2380.77;EPPR=1635.96;GTI=0;LEN=1;MEANALT=1.83333;MQM=59.9945;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.975342;PAIREDR=0.956117;PAO=0;PQA=0;PQR=0;PRO=0;QA=42739;QR=29697;RO=752;RPL=0;RPP=2380.77;RPPR=1635.96;RPR=1095;RUN=1;SAF=1095;SAP=2380.77;SAR=0;SRF=752;SRP=1635.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:276:111,164:111:4362:164:6360:-489.072,0,-309.416 0|1:374:143,230:143:5608:230:8961:-693.516,0,-392.029 0|1:218:98,120:98:3893:120:4699:-357.255,0,-284.764 0|1:372:140,232:140:5572:232:9095:-706.13,0,-389.355 0|1:292:110,182:110:4323:182:7098:-550.681,0,-301.154 0|1:320:150,167:150:5939:167:6526:-491.378,0,-438.562 dDocent_Contig_4663 15 . G T 176.681 . AB=0.135922;ABP=121.598;AC=1;AF=0.0833333;AN=12;AO=26;CIGAR=1X;DP=773;DPB=773;DPRA=0.60745;EPP=59.4686;EPPR=1625.1;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1032;QR=29571;RO=747;RPL=0;RPP=59.4686;RPPR=1625.1;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=747;SRP=1625.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:67:64,3:64:2526:3:120:0,-8.98111,-216.292 0/0:155:148,7:148:5890:7:277:0,-21.3597,-504.6 0/1:103:89,14:89:3564:14:554:-19.191,0,-289.782 0/0:99:97,2:97:3830:2:81:0,-22.1162,-337.032 0/0:168:168,0:168:6634:0:0:0,-50.573,-596.801 0/0:181:181,0:181:7127:0:0:0,-54.4864,-641.117 dDocent_Contig_4664 90 . T C 108.305 . AB=0.120968;ABP=157.745;AC=2;AF=0.166667;AN=12;AO=19;CIGAR=1X;DP=334;DPB=334;DPRA=1.03211;EPP=44.2683;EPPR=687.024;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.421053;PAIREDR=0.663492;PAO=0;PQA=0;PQR=0;PRO=0;QA=710;QR=11588;RO=315;RPL=11;RPP=4.03889;RPPR=20.9405;RPR=8;RUN=1;SAF=11;SAP=4.03889;SAR=8;SRF=183;SRP=20.9405;SRR=132;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1278:0:0:0,-10.536,-115.31 0/1:59:52,7:52:1862:7:263:-6.26614,0,-150.074 0/1:65:57,8:57:2086:8:300:-7.78621,0,-168.402 0/0:57:55,2:55:2033:2:73:0,-10.2295,-176.286 0/0:44:42,2:42:1582:2:74:0,-6.22046,-135.623 0/0:74:74,0:74:2747:0:0:0,-22.2762,-247.429 dDocent_Contig_4665 37 . A G 68.156 . AB=0.133333;ABP=55.5599;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=282;DPB=282;DPRA=0.575342;EPP=18.2106;EPPR=600.165;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996364;PAO=0;PQA=0;PQR=0;PRO=0;QA=280;QR=10881;RO=275;RPL=0;RPP=18.2106;RPPR=600.165;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=275;SRP=600.165;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:17,1:17:664:1:41:0,-1.32397,-55.9932 0/0:63:63,0:63:2506:0:0:0,-18.9649,-225.676 0/0:25:25,0:25:1001:0:0:0,-7.52575,-90.3847 0/1:45:39,6:39:1525:6:239:-8.33845,0,-123.949 0/0:61:61,0:61:2402:0:0:0,-18.3628,-216.335 0/0:70:70,0:70:2783:0:0:0,-21.0721,-250.591 dDocent_Contig_4666 10 . G A 371.589 . AB=0.05;ABP=143.722;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X2M1X;DP=192;DPB=192;DPRA=1.66667;EPP=11.6962;EPPR=352.617;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.5;PAIREDR=0.658385;PAO=0;PQA=0;PQR=0;PRO=0;QA=153;QR=6218;RO=161;RPL=0;RPP=11.6962;RPPR=352.617;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=161;SRP=352.617;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:15:13,0,2:13:489:0,2:0,78:-2.88733,-6.80072,-46.8496,0,-40.4367,-39.8346 0|0:24:22,0,2:22:837:0,2:0,74:0,-6.62266,-75.2772,-0.200703,-69.2258,-68.6237 0|1:16:14,2,0:14:538:2,0:74,0:-2.20838,0,-43.9426,-6.4228,-44.5446,-50.5959 0|0:64:48,2,14:48:1856:2,14:79,551:-30.8727,-38.821,-190.653,0,-145.93,-148.217 0|0:24:21,0,3:21:818:0,3:0,113:-3.31409,-9.63572,-76.8768,0,-67.6191,-66.716 0|0:49:43,0,6:43:1680:0,6:0,238:-7.04368,-19.988,-158.091,0,-138.499,-136.693 dDocent_Contig_4667 21 . T A 117276 . AB=0.786773;ABP=3329.57;AC=6;AF=0.5;AN=12;AO=3664;CIGAR=1X;DP=4657;DPB=4657;DPRA=0;EPP=7959.29;EPPR=2152.77;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=146154;QR=39604;RO=990;RPL=0;RPP=7959.29;RPPR=2152.77;RPR=3664;RUN=1;SAF=3664;SAP=7959.29;SAR=0;SRF=990;SRP=2152.77;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:536:137,398:137:5445:398:15778:-1257.32,0,-328.425 0/1:781:251,529:251:10072:529:21065:-1658.86,0,-670.592 0/1:682:163,519:163:6554:519:20749:-1660.34,0,-384.25 0/1:889:186,703:186:7461:703:28041:-2253.55,0,-403.486 0/1:789:74,715:74:2954:715:28513:-2326.11,0,-28.4318 0/1:980:179,800:179:7118:800:32008:-2582.66,0,-345.155 dDocent_Contig_4668 45 . C T 170.277 . AB=0.434783;ABP=3.86001;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=224;DPB=224;DPRA=0.516854;EPP=26.8965;EPPR=412.722;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.636364;PAIREDR=0.962264;PAO=0;PQA=0;PQR=0;PRO=0;QA=306;QR=8158;RO=212;RPL=0;RPP=26.8965;RPPR=396.497;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=210;SRP=446.155;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:858:0:0:0,-6.62266,-77.536 0/0:11:11,0:11:434:0:0:0,-3.31133,-39.4112 0/1:23:13,10:13:513:10:280:-18.5506,0,-39.5864 0/0:23:22,1:22:832:1:26:0,-4.32386,-72.5813 0/0:98:97,0:97:3710:0:0:0,-29.1999,-333.603 0/0:47:47,0:47:1811:0:0:0,-14.1484,-163.207 dDocent_Contig_4669 18 . T C 36.6786 . AB=0.15;ABP=24.2907;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=183;DPB=183;DPRA=0.613497;EPP=9.52472;EPPR=393.875;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=0;PAIREDR=0.6;PAO=0;PQA=0;PQR=0;PRO=0;QA=117;QR=7160;RO=180;RPL=0;RPP=9.52472;RPPR=393.875;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=180;SRP=393.875;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:17,3:17:683:3:117:-4.88961,0,-55.7788 0/0:46:46,0:46:1820:0:0:0,-13.8474,-164.01 0/0:26:26,0:26:1022:0:0:0,-7.82678,-92.2628 0/0:29:29,0:29:1162:0:0:0,-8.72987,-104.859 0/0:16:16,0:16:647:0:0:0,-4.81648,-58.5639 0/0:46:46,0:46:1826:0:0:0,-13.8474,-164.55 dDocent_Contig_4670 10 . G T 546.182 . AB=0.177143;ABP=161.453;AC=1;AF=0.0833333;AN=12;AO=51;CIGAR=1X;DP=1122;DPB=1122;DPRA=1.53943;EPP=113.755;EPPR=2328.66;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9981;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999066;PAO=0;PQA=0;PQR=0;PRO=0;QA=1994;QR=42294;RO=1071;RPL=0;RPP=113.755;RPPR=2328.66;RPR=51;RUN=1;SAF=51;SAP=113.755;SAR=0;SRF=1071;SRP=2328.66;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:148:148,0:148:5839:0:0:0,-44.5524,-525.329 0/0:313:293,20:293:11557:20:788:0,-22.9842,-968.141 0/1:175:144,31:144:5727:31:1206:-56.1411,0,-462.568 0/0:248:248,0:248:9801:0:0:0,-74.6554,-881.503 0/0:173:173,0:173:6831:0:0:0,-52.0782,-614.495 0/0:65:65,0:65:2539:0:0:0,-19.5669,-228.654 dDocent_Contig_4671 132 . T C 71.3161 . AB=0.15625;ABP=35.8538;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=174;DPB=174;DPRA=0.92437;EPP=16.0391;EPPR=367.818;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.761905;PAO=0;PQA=0;PQR=0;PRO=0;QA=240;QR=6721;RO=168;RPL=6;RPP=16.0391;RPPR=367.818;RPR=0;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=367.818;SRR=168;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:644:0:0:0,-5.11751,-58.2739 0/0:23:22,1:22:887:1:41:0,-2.82912,-76.0426 0/0:42:42,0:42:1665:0:0:0,-12.6433,-150.075 0/0:30:30,0:30:1221:0:0:0,-9.0309,-110.158 0/0:30:30,0:30:1209:0:0:0,-9.0309,-109.084 0/1:32:27,5:27:1095:5:199:-8.65448,0,-89.2017 dDocent_Contig_4672 40 . T C 81.979 . AB=0.0984456;ABP=273.319;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=1321;DPB=1321;DPRA=0.704197;EPP=46.4397;EPPR=2823.75;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=759;QR=44612;RO=1299;RPL=0;RPP=46.4397;RPPR=2823.75;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=1299;SRP=2823.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:151:150,1:150:5073:1:9:0,-44.5555,-455.784 0/0:292:290,0:290:9932:0:0:0,-87.2987,-893.714 0/0:246:246,0:246:8642:0:0:0,-74.0534,-777.716 0/0:154:154,0:154:5322:0:0:0,-46.3586,-479.092 0/1:193:174,19:174:5924:19:750:-9.72078,0,-475.153 0/0:285:285,0:285:9719:0:0:0,-85.7935,-874.615 dDocent_Contig_4673 16 . T A 1611.29 . AB=0.0609756;ABP=140.29;AC=0;AF=0;AN=12;AO=5;CIGAR=4M1X13M;DP=354;DPB=359.389;DPRA=0;EPP=13.8677;EPPR=396.047;GTI=0;LEN=1;MEANALT=10;MQM=60;MQMR=60;NS=6;NUMALT=7;ODDS=0;PAIRED=1;PAIREDR=0.928177;PAO=0;PQA=0;PQR=0;PRO=0;QA=202;QR=6895;RO=181;RPL=0;RPP=13.8677;RPPR=396.047;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=181;SRP=396.047;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:45:22,0,0,4,8,1,0,4:22:842:0,0,4,8,1,0,4:0,0,155,316,40,0,161:-19.4165,-26.0391,-95.16,-26.0391,-95.16,-95.16,-13.2942,-82.4245,-82.4245,-81.2204,0,-69.1481,-69.1481,-56.4108,-66.7399,-22.7407,-91.8639,-91.8639,-79.1282,-65.8515,-91.5628,-26.0391,-95.16,-95.16,-82.4245,-69.1481,-91.8639,-95.16,-12.7546,-81.8865,-81.8865,-69.1502,-55.8725,-78.5902,-81.8865,-80.6824 0|0:63:23,0,0,3,20,7,0,9:23:874:0,0,3,20,7,0,9:0,0,116,779,276,0,367:-57.1047,-64.0284,-135.7,-64.0284,-135.7,-135.7,-54.5008,-126.173,-126.173,-125.27,0,-71.6727,-71.6727,-62.1448,-65.6521,-41.3181,-112.991,-112.991,-103.463,-48.9617,-110.883,-64.0284,-135.7,-135.7,-126.173,-71.6727,-112.991,-135.7,-33.7435,-105.418,-105.418,-95.8898,-41.3871,-82.7071,-105.418,-102.709 0|0:43:18,0,0,3,14,1,0,3:18:696:0,0,3,14,1,0,3:0,0,120,533,40,0,122:-38.3453,-43.7638,-100.951,-43.7638,-100.951,-100.951,-33.8709,-91.0637,-91.0637,-90.1606,0,-57.23,-57.23,-47.3394,-53.0156,-40.4662,-97.6554,-97.6554,-87.7675,-53.9331,-97.3544,-43.7638,-100.951,-100.951,-91.0637,-57.23,-97.6554,-100.951,-33.6914,-90.8847,-90.8847,-80.9964,-47.1601,-87.5884,-90.8847,-89.9816 0|0:74:46,0,0,11,9,1,0,3:46:1740:0,0,11,9,1,0,3:0,0,425,351,40,0,121:-21.0657,-34.9131,-177.553,-34.9131,-177.553,-177.553,0,-142.648,-142.648,-139.337,-6.0531,-148.7,-148.7,-113.795,-145.991,-31.6169,-174.257,-174.257,-139.353,-145.405,-173.956,-34.9131,-177.553,-177.553,-142.648,-148.7,-174.257,-177.553,-24.9348,-167.577,-167.577,-132.673,-138.725,-164.282,-167.577,-166.674 0|0:47:30,5,2,2,2,0,0,5:30:1151:5,2,2,2,0,0,5:196,74,75,78,0,0,203:-7.72526,-0.629381,-93.6096,-10.7042,-89.0629,-104.581,-10.6137,-88.9728,-99.0411,-104.491,-10.3421,-88.7024,-98.7707,-98.6807,-104.221,-16.7562,-95.1147,-105.183,-105.093,-104.823,-111.235,-16.7562,-95.1147,-105.183,-105.093,-104.823,-111.235,-111.235,0,-78.3688,-88.4375,-88.3475,-88.077,-94.4895,-94.4895,-92.9843 0|0:82:42,3,8,3,13,2,5,3:42:1592:3,8,3,13,2,5,3:117,302,110,503,80,202,121:-28.6766,-31.7011,-161.327,-16.5709,-137.482,-144.691,-32.3304,-153.24,-138.11,-161.955,0,-120.914,-105.784,-121.543,-126.619,-34.7284,-155.639,-140.509,-156.268,-123.941,-164.655,-24.6622,-145.575,-130.444,-146.203,-113.877,-148.602,-153.688,-31.3435,-152.255,-137.125,-152.883,-120.557,-155.282,-145.218,-160.97 dDocent_Contig_4674 12 . T C 7276.07 . AB=0.419367;ABP=151.138;AC=6;AF=0.5;AN=12;AO=1100;CIGAR=1X;DP=2623;DPB=2623;DPRA=0;EPP=2391.63;EPPR=3245.3;GTI=0;LEN=1;MEANALT=1.33333;MQM=15.6582;MQMR=58.5595;NS=6;NUMALT=1;ODDS=0;PAIRED=0.996364;PAIREDR=0.979619;PAO=0;PQA=0;PQR=0;PRO=0;QA=43283;QR=57539;RO=1521;RPL=0;RPP=2391.63;RPPR=3305.82;RPR=1100;RUN=1;SAF=1100;SAP=2391.63;SAR=0;SRF=1514;SRP=3245.3;SRR=7;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:327:185,142:185:6941:142:5577:-96.5484,0,-512.367 0/1:420:275,145:275:10444:145:5710:-72.7812,0,-782.805 0/1:262:192,70:192:7350:70:2730:-21.0139,0,-570.672 0/1:509:325,184:325:12239:184:7202:-103.872,0,-935.848 0/1:572:244,327:244:9262:327:12939:-282.723,0,-659.388 0/1:533:300,232:300:11303:232:9125:-161.89,0,-846.849 dDocent_Contig_4675 90 . C G 200.029 . AB=0.107492;ABP=824.647;AC=1;AF=0.0833333;AN=12;AO=238;CIGAR=1X;DP=3982;DPB=3982;DPRA=0;EPP=519.821;EPPR=8130.83;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.995798;PAIREDR=0.99813;PAO=0;PQA=0;PQR=0;PRO=0;QA=8277;QR=131925;RO=3743;RPL=238;RPP=519.821;RPPR=8130.83;RPR=0;RUN=1;SAF=238;SAP=519.821;SAR=0;SRF=3743;SRP=8130.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:476:436,40:436:15444:40:1390:0,-17.8941,-1264.3 0/1:614:548,66:548:19276:66:2290:-21.5258,0,-1549.6 0/0:498:452,46:452:15962:46:1632:0,-2.74352,-1289.13 0/0:654:605,49:605:21320:49:1684:0,-45.0348,-1766.47 0/0:778:742,36:742:26129:36:1268:0,-119.779,-2236.5 0/0:962:960,1:960:33794:1:13:0,-288.11,-3039.18 dDocent_Contig_4676 67 . C T 233.488 . AB=0.245902;ABP=37.2199;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=402;DPB=402;DPRA=0.894428;EPP=35.5824;EPPR=843.37;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994832;PAO=0;PQA=0;PQR=0;PRO=0;QA=477;QR=12774;RO=387;RPL=15;RPP=35.5824;RPPR=843.37;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=387;SRP=843.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:988:0:0:0,-8.72987,-89.2304 0/1:61:46,15:46:1526:15:477:-24.8717,0,-119.267 0/0:132:132,0:132:4306:0:0:0,-39.736,-387.758 0/0:63:63,0:63:2078:0:0:0,-18.9649,-187.293 0/0:59:59,0:59:1928:0:0:0,-17.7608,-173.795 0/0:58:58,0:58:1948:0:0:0,-17.4597,-175.6 dDocent_Contig_4677 76 . C G 209.051 . AB=0.139423;ABP=237.905;AC=4;AF=0.333333;AN=12;AO=36;CIGAR=1X;DP=321;DPB=321;DPRA=0;EPP=81.1833;EPPR=621.88;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.805556;PAIREDR=0.642105;PAO=0;PQA=0;PQR=0;PRO=0;QA=1227;QR=9708;RO=285;RPL=25;RPP=14.8328;RPPR=13.441;RPR=11;RUN=1;SAF=25;SAP=14.8328;SAR=11;SRF=161;SRP=13.441;SRR=124;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:46:39,7:39:1315:7:235:-7.63069,0,-104.8 0/1:46:38,8:38:1298:8:272:-10.9642,0,-103.271 0/0:39:37,2:37:1256:2:68:0,-5.28229,-106.881 0/1:81:71,10:71:2433:10:347:-7.18181,0,-194.848 0/1:35:31,4:31:1060:4:139:-2.31664,0,-85.1719 0/0:74:69,5:69:2346:5:166:0,-7.00873,-196.138 dDocent_Contig_4678 12 . G T 35.2201 . AB=0.0965909;ABP=251.792;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=571;DPB=571;DPRA=2.22785;EPP=39.9253;EPPR=1206.01;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=641;QR=22013;RO=554;RPL=0;RPP=39.9253;RPPR=1206.01;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=554;SRP=1206.01;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:975:0:0:0,-7.22472,-88.0474 0/0:72:72,0:72:2844:0:0:0,-21.6742,-256.067 0/0:28:28,0:28:1084:0:0:0,-8.42884,-97.8452 0/0:81:81,0:81:3206:0:0:0,-24.3834,-288.61 0/0:190:190,0:190:7599:0:0:0,-57.1957,-683.519 0/1:176:159,17:159:6305:17:641:-5.04476,0,-514.216 dDocent_Contig_4679 11 . G A 689.97 . AB=0.12993;ABP=515.705;AC=1;AF=0.0833333;AN=12;AO=67;CIGAR=1X;DP=3451;DPB=3451;DPRA=0.759816;EPP=148.499;EPPR=7349.1;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.999409;PAO=0;PQA=0;PQR=0;PRO=0;QA=2660;QR=134295;RO=3383;RPL=0;RPP=148.499;RPPR=7349.1;RPR=67;RUN=1;SAF=67;SAP=148.499;SAR=0;SRF=3383;SRP=7349.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:431:375,56:375:14910:56:2220:-70.2189,0,-1211.01 0/0:690:686,3:686:27162:3:117:0,-196.673,-2431.36 0/0:369:361,8:361:14344:8:323:0,-81.642,-1260.45 0/0:669:669,0:669:26560:0:0:0,-201.389,-2388.05 0/0:628:628,0:628:24909:0:0:0,-189.047,-2239.64 0/0:664:664,0:664:26410:0:0:0,-199.884,-2374.57 dDocent_Contig_4680 98 . N T 1833.29 . AB=0;ABP=0;AC=8;AF=0.8;AN=10;AO=87;CIGAR=1X;DP=91;DPB=91;DPRA=22.5;EPP=191.928;EPPR=0;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2021;QR=0;RO=0;RPL=87;RPP=191.928;RPPR=0;RPR=0;RUN=1;SAF=87;SAP=191.928;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:25:-2.37497,-0.60206,0 1/1:3:0,3:0:0:3:77:-7.18599,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:3:0,2:0:0:2:54:-4.99288,-0.60206,0 0/0:1:0,0:0:0:0:0:0,0,0 1/1:82:0,80:0:0:80:1865:-167.996,-24.0824,0 dDocent_Contig_4681 24 . G A 34.9408 . AB=0.105882;ABP=117.69;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=248;DPB=248;DPRA=0;EPP=39.9253;EPPR=504.62;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.941176;PAIREDR=0.761905;PAO=0;PQA=0;PQR=0;PRO=0;QA=658;QR=8656;RO=231;RPL=0;RPP=39.9253;RPPR=504.62;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=231;SRP=504.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:34,1:34:1287:1:40:0,-6.54037,-112.126 0/0:42:39,3:39:1441:3:114:0,-2.01104,-119.334 0/1:44:39,5:39:1494:5:198:-4.95222,0,-121.486 0/0:51:49,2:49:1817:2:78:0,-7.94906,-156.388 0/0:35:33,2:33:1228:2:73:0,-3.60535,-103.882 0/1:41:37,4:37:1389:4:155:-1.98321,0,-112.953 dDocent_Contig_4682 10 . G C 728.181 . AB=0.220126;ABP=111.188;AC=4;AF=0.333333;AN=12;AO=37;CIGAR=1X2M3D1M;DP=217;DPB=201.143;DPRA=1.2;EPP=83.3548;EPPR=393.875;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.864865;PAIREDR=0.816667;PAO=0;PQA=0;PQR=0;PRO=0;QA=1485;QR=7158;RO=180;RPL=0;RPP=83.3548;RPPR=393.875;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=180;SRP=393.875;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:22:17,5:17:679:5:197:-11.4832,0,-54.8206 0|1:49:40,9:40:1574:9:362:-18.1937,0,-127.153 0|0:27:25,2:25:1006:2:80:0,-0.536235,-83.2467 0|1:38:27,11:27:1070:11:447:-29.1469,0,-85.1523 0|0:31:31,0:31:1241:0:0:0,-9.33193,-111.964 0|1:50:40,10:40:1588:10:399:-21.2159,0,-128.11 dDocent_Contig_4684 37 . T C 1571.28 . AB=0.313433;ABP=63.7791;AC=6;AF=0.5;AN=12;AO=63;CIGAR=1X;DP=201;DPB=201;DPRA=0;EPP=139.813;EPPR=294.051;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.698413;PAIREDR=0.666667;PAO=0;PQA=0;PQR=0;PRO=0;QA=2519;QR=5459;RO=138;RPL=0;RPP=139.813;RPPR=302.673;RPR=63;RUN=1;SAF=63;SAP=139.813;SAR=0;SRF=137;SRP=294.051;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:16,15:16:642:15:614:-46.2645,0,-48.7815 0/1:48:26,22:26:1030:22:859:-63.1707,0,-78.5458 0/1:30:24,6:24:960:6:241:-13.0354,0,-77.6696 0/1:41:35,6:35:1375:6:246:-10.1779,0,-111.664 0/1:22:12,10:12:468:10:397:-29.464,0,-35.8402 0/1:29:25,4:25:984:4:162:-6.23709,0,-80.1264 dDocent_Contig_4685 107 . N G 459.024 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=14;CIGAR=1X;DP=14;DPB=14;DPRA=0;EPP=33.4109;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0.857143;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=487;QR=0;RO=0;RPL=0;RPP=33.4109;RPPR=0;RPR=14;RUN=1;SAF=0;SAP=33.4109;SAR=14;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:6:0,6:0:0:6:209:-19.1511,-1.80618,0 1/1:3:0,3:0:0:3:105:-9.79616,-0.90309,0 1/1:3:0,3:0:0:3:104:-9.70309,-0.90309,0 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_4686 15 . C T 110.759 . AB=0.159091;ABP=47.4268;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=314;DPB=314;DPRA=1.80882;EPP=35.5824;EPPR=652.281;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.989967;PAO=0;PQA=0;PQR=0;PRO=0;QA=606;QR=11909;RO=299;RPL=0;RPP=35.5824;RPPR=652.281;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=299;SRP=652.281;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:13,1:13:532:1:41:0,-0.119853,-44.1316 0/1:44:37,7:37:1446:7:283:-12.5983,0,-117.136 0/0:16:16,0:16:650:0:0:0,-4.81648,-58.8329 0/0:108:104,4:104:4147:4:164:0,-17.3613,-358.049 0/0:52:52,0:52:2074:0:0:0,-15.6536,-186.845 0/0:80:77,3:77:3060:3:118:0,-13.0808,-264.468 dDocent_Contig_4687 22 . T C 35990.3 . AB=0.462788;ABP=34.8474;AC=6;AF=0.5;AN=12;AO=1225;CIGAR=1X;DP=2647;DPB=2647;DPRA=0;EPP=2663.06;EPPR=3082.16;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=48996;QR=56649;RO=1418;RPL=0;RPP=2663.06;RPPR=3082.16;RPR=1225;RUN=1;SAF=1225;SAP=2663.06;SAR=0;SRF=1418;SRP=3082.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:377:285,92:285:11358:92:3635:-213.693,0,-907.962 0/1:597:267,330:267:10652:330:13168:-1004.42,0,-778.25 0/1:259:133,125:133:5340:125:4961:-368.296,0,-402.354 0/1:467:319,147:319:12819:147:5934:-393.353,0,-1012.29 0/1:497:256,239:256:10184:239:9547:-709.235,0,-766.489 0/1:450:158,292:158:6296:292:11751:-921.256,0,-430.92 dDocent_Contig_4688 98 . N A 558.099 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=18;CIGAR=1X;DP=18;DPB=18;DPRA=0;EPP=42.0968;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=593;QR=0;RO=0;RPL=18;RPP=42.0968;RPPR=0;RPR=0;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:6:0,6:0:0:6:182:-16.6787,-1.80618,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:6:0,6:0:0:6:203:-18.602,-1.80618,0 1/1:4:0,4:0:0:4:139:-12.8527,-1.20412,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_4689 116 . A T 129.399 . AB=0.194444;ABP=32.2045;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=193;DPB=193;DPRA=0.622093;EPP=26.8965;EPPR=398.218;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.727273;PAIREDR=0.846154;PAO=0;PQA=0;PQR=0;PRO=0;QA=429;QR=7178;RO=182;RPL=11;RPP=26.8965;RPPR=398.218;RPR=0;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=398.218;SRR=182;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:13,1:13:512:1:41:0,-0.119853,-42.3317 0/0:49:49,0:49:1909:0:0:0,-14.7505,-172.027 0/0:27:25,2:25:990:2:72:0,-1.29257,-82.5675 0/1:36:29,7:29:1146:7:277:-14.4622,0,-92.5898 0/0:30:29,1:29:1155:1:39:0,-5.13434,-100.339 0/0:37:37,0:37:1466:0:0:0,-11.1381,-132.197 dDocent_Contig_4690 174 . T C 32.5045 . AB=0.0921659;ABP=316.513;AC=1;AF=0.0833333;AN=12;AO=53;CIGAR=1X;DP=1519;DPB=1519;DPRA=0.705556;EPP=118.098;EPPR=3186.39;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.962264;PAIREDR=0.999318;PAO=0;PQA=0;PQR=0;PRO=0;QA=2068;QR=57792;RO=1466;RPL=53;RPP=118.098;RPPR=3186.39;RPR=0;RUN=1;SAF=0;SAP=118.098;SAR=53;SRF=0;SRP=3186.39;SRR=1466;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:217:197,20:197:7736:20:772:-4.47205,0,-630.543 0/0:301:279,22:279:11004:22:862:0,-12.7206,-911.759 0/0:113:112,1:112:4470:1:36:0,-30.4181,-398.644 0/0:258:248,10:248:9802:10:398:0,-41.4874,-845.408 0/0:294:294,0:294:11584:0:0:0,-88.5028,-1041.79 0/0:336:336,0:336:13196:0:0:0,-101.146,-1186.7 dDocent_Contig_4691 98 . N G 515.553 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=19;CIGAR=1X;DP=20;DPB=20;DPRA=0;EPP=44.2683;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=2.1684e-19;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=549;QR=0;RO=0;RPL=19;RPP=44.2683;RPPR=0;RPR=0;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:60:-5.69857,-0.60206,0 1/1:6:0,6:0:0:6:201:-18.4192,-1.80618,0 1/1:2:0,2:0:0:2:44:-4.17896,-0.60206,0 1/1:4:0,3:0:0:3:101:-9.25696,-0.90309,0 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 1/1:5:0,5:0:0:5:136:-12.5084,-1.50515,0 dDocent_Contig_4692 107 . N A 110.954 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=115;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:38:-3.60948,-0.60206,0 1/1:3:0,3:0:0:3:77:-7.18404,-0.90309,0 dDocent_Contig_4693 143 . G C 714.733 . AB=0.178082;ABP=200.138;AC=1;AF=0.0833333;AN=12;AO=42;CIGAR=1X;DP=1088;DPB=1088;DPRA=1.60287;EPP=94.2121;EPPR=2272.2;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996172;PAO=0;PQA=0;PQR=0;PRO=0;QA=1649;QR=41220;RO=1045;RPL=0;RPP=94.2121;RPPR=2272.2;RPR=42;RUN=1;SAF=0;SAP=94.2121;SAR=42;SRF=0;SRP=2272.2;SRR=1045;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:125:124,0:124:4912:0:0:0,-37.3277,-441.877 0/0:136:136,0:136:5284:0:0:0,-40.9401,-475.419 0/0:264:263,1:263:10272:1:35:0,-75.9733,-920.308 0/0:157:157,0:157:6254:0:0:0,-47.2617,-562.596 0/0:187:185,2:185:7382:2:73:0,-49.3634,-657.056 0/1:219:180,39:180:7116:39:1541:-72.9962,0,-574.171 dDocent_Contig_4694 14 . T C 15613.1 . AB=0.258141;ABP=1282.37;AC=6;AF=0.5;AN=12;AO=650;CIGAR=1X;DP=2518;DPB=2518;DPRA=0;EPP=1414.47;EPPR=4059.32;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998394;PAO=0;PQA=0;PQR=0;PRO=0;QA=25898;QR=73254;RO=1868;RPL=0;RPP=1414.47;RPPR=4059.32;RPR=650;RUN=1;SAF=650;SAP=1414.47;SAR=0;SRF=1868;SRP=4059.32;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:305:257,48:257:10136:48:1906:-79.9241,0,-819.839 0/1:549:472,77:472:18455:77:3056:-109.856,0,-1494.3 0/1:320:273,47:273:10747:47:1853:-70.6539,0,-870.229 0/1:447:390,57:390:15290:57:2287:-71.4334,0,-1240.44 0/1:457:194,263:194:7661:263:10501:-806.825,0,-551.566 0/1:440:282,158:282:10965:158:6295:-433.843,0,-853.761 dDocent_Contig_4695 98 . N T 523.583 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=20;CIGAR=1X;DP=21;DPB=21;DPRA=0;EPP=46.4397;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=556;QR=0;RO=0;RPL=20;RPP=46.4397;RPPR=0;RPR=0;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:73:-6.81167,-0.90309,0 1/1:3:0,3:0:0:3:100:-9.33053,-0.90309,0 1/1:4:0,4:0:0:4:130:-12.0211,-1.20412,0 1/1:2:0,2:0:0:2:31:-2.94487,-0.60206,0 1/1:4:0,3:0:0:3:79:-7.25272,-0.90309,0 1/1:5:0,5:0:0:5:143:-13.1518,-1.50515,0 dDocent_Contig_4696 98 . N G 38083.1 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=1384;CIGAR=1X;DP=1430;DPB=1430;DPRA=0;EPP=3008.33;EPPR=0;GTI=0;LEN=1;MEANALT=2.5;MQM=58.6402;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.945809;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=42562;QR=0;RO=0;RPL=1384;RPP=3008.33;RPPR=0;RPR=0;RUN=1;SAF=1384;SAP=3008.33;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:134:0,133:0:0:133:4021:-359.784,-40.037,0 1/1:271:0,262:0:0:262:8095:-721.725,-78.8699,0 1/1:131:0,128:0:0:128:4074:-365.733,-38.5318,0 1/1:202:0,193:0:0:193:5769:-514.432,-58.0988,0 1/1:327:0,312:0:0:312:9790:-877.668,-93.9214,0 1/1:365:0,356:0:0:356:10813:-968.188,-107.167,0 dDocent_Contig_4697 8 . T C 24431.2 . AB=0.447769;ABP=51.3269;AC=6;AF=0.5;AN=12;AO=913;CIGAR=1X3M;DP=2039;DPB=2039;DPRA=0;EPP=1985.56;EPPR=2013.79;GTI=0;LEN=1;MEANALT=5.83333;MQM=55.5192;MQMR=58.1955;NS=6;NUMALT=3;ODDS=2.22045e-16;PAIRED=0.704272;PAIREDR=0.919006;PAO=0;PQA=0;PQR=0;PRO=0;QA=33777;QR=35729;RO=926;RPL=0;RPP=1985.56;RPPR=2013.79;RPR=913;RUN=1;SAF=913;SAP=1985.56;SAR=0;SRF=926;SRP=2013.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:319:98,16,180,23:98:3756:16,180,23:613,6775,885:-523.835,-503.032,-794.468,0,-245.942,-242.061,-481.656,-727.605,-224.567,-770.986 0|1:361:149,14,179,11:149:5763:14,179,11:528,6731,439:-502.982,-504.569,-970.585,0,-426.961,-416.343,-512.145,-939.109,-434.537,-979.064 0|1:234:101,27,91,11:101:3907:27,91,11:1052,3460,439:-251.053,-194.987,-505.324,0,-231.99,-291.064,-245.62,-477.616,-282.622,-560.772 0|1:348:125,2,175,29:125:4852:2,175,29:78,6451,1127:-480.203,-511.42,-903.086,0,-385.855,-339.586,-426.235,-812.092,-300.672,-809.774 0|1:367:227,4,126,8:227:8745:4,126,8:157,4443,322:-287.173,-342.593,-1058.07,0,-703.74,-678.723,-329.239,-1033.01,-690.387,-1043.51 0|1:410:226,1,162,17:226:8706:1,162,17:39,5917,677:-409.094,-473.93,-1179.81,0,-702.965,-657.395,-421.913,-1124.9,-650.95,-1122.98 dDocent_Contig_4699 37 . C T 155.913 . AB=0.28;ABP=13.5202;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=113;DPB=113;DPRA=1.21212;EPP=22.5536;EPPR=228.843;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.888889;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=366;QR=4130;RO=104;RPL=0;RPP=22.5536;RPPR=228.843;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=104;SRP=228.843;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:547:0:0:0,-4.21442,-49.5665 0/0:19:19,0:19:755:0:0:0,-5.71957,-68.2686 0/0:16:15,1:15:605:1:41:0,-0.721913,-50.694 0/1:10:8,2:8:317:2:81:-4.67543,0,-25.884 0/1:15:10,5:10:404:5:203:-14.1374,0,-32.2041 0/0:39:38,1:38:1502:1:41:0,-7.6456,-131.334 dDocent_Contig_4700 11 . A T 300.717 . AB=0.170543;ABP=124.63;AC=1;AF=0.0833333;AN=12;AO=22;CIGAR=1X;DP=580;DPB=580;DPRA=1.43016;EPP=50.7827;EPPR=1214.69;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998208;PAO=0;PQA=0;PQR=0;PRO=0;QA=779;QR=22244;RO=558;RPL=0;RPP=50.7827;RPPR=1214.69;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=558;SRP=1214.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:108:108,0:108:4299:0:0:0,-32.5112,-386.862 0/0:62:62,0:62:2464:0:0:0,-18.6639,-221.904 0/0:123:123,0:123:4930:0:0:0,-37.0267,-443.583 0/1:129:107,22:107:4271:22:779:-31.5946,0,-345.514 0/0:107:107,0:107:4284:0:0:0,-32.2102,-385.517 0/0:51:51,0:51:1996:0:0:0,-15.3525,-179.835 dDocent_Contig_4701 163 . C A 82.9983 . AB=0.159091;ABP=47.4268;AC=3;AF=0.25;AN=12;AO=7;CIGAR=1X2M;DP=95;DPB=95;DPRA=2.2;EPP=10.7656;EPPR=187.585;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.823529;PAO=0;PQA=0;PQR=0;PRO=0;QA=244;QR=3300;RO=85;RPL=1;RPP=10.7656;RPPR=187.585;RPR=6;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=187.585;SRR=85;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:15:12,0,3:12:461:0,3:0,100:-4.81492,-8.42728,-46.3073,0,-38.2233,-37.3202 0|1:29:25,0,4:25:977:0,4:0,144:-4.58177,-12.1075,-92.4538,0,-80.7103,-79.5062 0|0:12:12,0,0:12:474:0,0:0,0:0,-3.61236,-43.0126,-3.61236,-43.0126,-43.0126 0|1:21:18,3,0:18:685:3,0:112,0:-4.12411,0,-55.652,-9.54264,-56.5551,-65.7236 0|0:13:13,0,0:13:504:0,0:0,0:0,-3.91339,-45.7076,-3.91339,-45.7076,-45.7076 0|0:5:5,0,0:5:199:0,0:0,0:0,-1.50515,-18.2886,-1.50515,-18.2886,-18.2886 dDocent_Contig_4702 26 . G T 1997.15 . AB=0.131174;ABP=1462.24;AC=3;AF=0.25;AN=12;AO=185;CIGAR=1X;DP=2051;DPB=2051;DPRA=0;EPP=404.733;EPPR=4052.81;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99571;PAO=0;PQA=0;PQR=0;PRO=0;QA=7304;QR=73912;RO=1865;RPL=0;RPP=404.733;RPPR=4052.81;RPR=185;RUN=1;SAF=185;SAP=404.733;SAR=0;SRF=1865;SRP=4052.81;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:226:201,25:201:7893:25:1007:-22.8918,0,-641.939 0/0:310:297,13:297:11731:13:511:0,-46.9886,-1008.66 0/0:141:136,5:136:5397:5:197:0,-24.3412,-467.463 0/0:365:360,5:360:14322:5:194:0,-92.0454,-1270.09 0/1:455:393,61:393:15625:61:2374:-76.835,0,-1268.09 0/1:554:478,76:478:18944:76:3021:-105.21,0,-1536.67 dDocent_Contig_4704 24 . C T 626.878 . AB=0.140878;ABP=488.061;AC=1;AF=0.0833333;AN=12;AO=128;CIGAR=1X;DP=2659;DPB=2659;DPRA=0.934196;EPP=280.959;EPPR=5499.01;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99921;PAO=0;PQA=0;PQR=0;PRO=0;QA=4432;QR=99635;RO=2531;RPL=0;RPP=280.959;RPPR=5499.01;RPR=128;RUN=1;SAF=128;SAP=280.959;SAR=0;SRF=2531;SRP=5499.01;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:364:359,5:359:14158:5:155:0,-95.3207,-1258.95 0/0:575:575,0:575:22557:0:0:0,-173.092,-2028.29 0/0:352:352,0:352:13860:0:0:0,-105.963,-1246.41 0/0:469:447,22:447:17619:22:730:0,-75.18,-1518.32 0/0:466:426,40:426:16726:40:1388:0,-15.0753,-1378.84 0/1:433:372,61:372:14715:61:2159:-64.2107,0,-1192.88 dDocent_Contig_4705 10 . G A 111.799 . AB=0.129412;ABP=104.405;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=243;DPB=243;DPRA=1.07595;EPP=26.8965;EPPR=506.792;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.636364;PAIREDR=0.676724;PAO=0;PQA=0;PQR=0;PRO=0;QA=436;QR=9237;RO=232;RPL=0;RPP=26.8965;RPPR=506.792;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=232;SRP=506.792;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:34,0:34:1357:0:0:0,-10.235,-122.39 0/0:36:36,0:36:1419:0:0:0,-10.8371,-127.962 0/0:39:39,0:39:1585:0:0:0,-11.7402,-142.877 0/0:49:49,0:49:1936:0:0:0,-14.7505,-174.431 0/1:40:34,6:34:1370:6:239:-9.8433,0,-111.515 0/1:45:40,5:40:1570:5:197:-4.55823,0,-127.983 dDocent_Contig_4706 52 . T A 32061.9 . AB=0.259353;ABP=2598.04;AC=6;AF=0.5;AN=12;AO=1338;CIGAR=1X;DP=5159;DPB=5159;DPRA=0;EPP=2908.44;EPPR=8298.03;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=53039;QR=151652;RO=3820;RPL=1338;RPP=2908.44;RPPR=8298.03;RPR=0;RUN=1;SAF=1338;SAP=2908.44;SAR=0;SRF=3820;SRP=8298.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:801:639,161:639:25376:161:6371:-331.98,0,-2040.43 0/1:619:483,136:483:19221:136:5363:-296.182,0,-1541.97 0/1:713:565,148:565:22318:148:5893:-315.512,0,-1792.16 0/1:827:585,242:585:23320:242:9525:-607.75,0,-1847.83 0/1:961:689,272:689:27255:272:10773:-679.581,0,-2161.3 0/1:1238:859,379:859:34162:379:15114:-986.408,0,-2698.79 dDocent_Contig_4707 67 . C T 911.388 . AB=0.113166;ABP=1197.49;AC=2;AF=0.166667;AN=12;AO=131;CIGAR=1X;DP=2643;DPB=2643;DPRA=0.654148;EPP=287.473;EPPR=5457.75;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.992366;PAIREDR=0.816879;PAO=0;PQA=0;PQR=0;PRO=0;QA=5197;QR=99743;RO=2512;RPL=131;RPP=287.473;RPPR=5457.75;RPR=0;RUN=1;SAF=131;SAP=287.473;SAR=0;SRF=2512;SRP=5457.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:295:279,16:279:10995:16:639:0,-30.9622,-930.999 0/1:416:368,48:368:14567:48:1902:-46.1579,0,-1184.75 0/0:284:273,11:273:10903:11:440:0,-45.5391,-940.591 0/1:503:447,56:447:17739:56:2216:-48.2028,0,-1443.72 0/0:652:652,0:652:25927:0:0:0,-196.272,-2331.22 0/0:493:493,0:493:19612:0:0:0,-148.408,-1763.49 dDocent_Contig_4708 47 . G A 957.973 . AB=0.139579;ABP=593.123;AC=1;AF=0.0833333;AN=12;AO=138;CIGAR=1X;DP=2839;DPB=2839;DPRA=0.992639;EPP=302.673;EPPR=5863.81;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5338;QR=105103;RO=2699;RPL=0;RPP=302.673;RPPR=5863.81;RPR=138;RUN=1;SAF=138;SAP=302.673;SAR=0;SRF=2699;SRP=5863.81;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:445:445,0:445:17292:0:0:0,-133.958,-1555.07 0/0:654:617,36:617:24060:36:1400:0,-70.7066,-2037.27 0/0:257:247,10:247:9615:10:389:0,-42.0003,-829.487 0/0:454:435,19:435:17045:19:722:0,-71.3702,-1467.53 0/0:506:506,0:506:19560:0:0:0,-152.321,-1758.99 0/1:523:449,73:449:17531:73:2827:-97.3201,0,-1419.31 dDocent_Contig_4709 57 . C T 2981.39 . AB=0.139535;ABP=1798.62;AC=4;AF=0.333333;AN=12;AO=223;CIGAR=1X;DP=2567;DPB=2567;DPRA=0.547307;EPP=487.249;EPPR=5092.94;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9782;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.988055;PAO=0;PQA=0;PQR=0;PRO=0;QA=8747;QR=92177;RO=2344;RPL=223;RPP=487.249;RPPR=5092.94;RPR=0;RUN=1;SAF=223;SAP=487.249;SAR=0;SRF=2344;SRP=5092.94;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:291:246,45:246:9656:45:1759:-70.9388,0,-780.885 0/1:282:235,47:235:9349:47:1865:-83.1704,0,-755.973 0/1:450:388,62:388:15155:62:2382:-79.1059,0,-1227.43 0/1:568:500,68:500:19686:68:2700:-72.1464,0,-1598.22 0/0:289:288,1:288:11281:1:41:0,-82.9031,-1010.49 0/0:687:687,0:687:27050:0:0:0,-206.808,-2432.22 dDocent_Contig_4710 118 . T G 551.088 . AB=0.230263;ABP=99.0694;AC=6;AF=0.5;AN=12;AO=35;CIGAR=1X;DP=152;DPB=152;DPRA=0;EPP=79.0118;EPPR=257.073;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1203;QR=3994;RO=117;RPL=0;RPP=79.0118;RPPR=257.073;RPR=35;RUN=1;SAF=0;SAP=79.0118;SAR=35;SRF=0;SRP=257.073;SRR=117;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:12,4:12:400:4:140:-8.12845,0,-31.5046 0/1:21:9,12:9:315:12:419:-31.7229,0,-22.3671 0/1:11:10,1:10:338:1:35:-0.187299,0,-27.4365 0/1:14:11,3:11:367:3:91:-4.277,0,-29.1385 0/1:43:36,7:36:1227:7:242:-9.17342,0,-97.7844 0/1:47:39,8:39:1347:8:276:-11.0275,0,-107.383 dDocent_Contig_4712 10 . C T 467.141 . AB=0.18;ABP=136.426;AC=2;AF=0.166667;AN=12;AO=27;CIGAR=1X;DP=341;DPB=341;DPRA=1.57068;EPP=61.6401;EPPR=684.853;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993631;PAO=0;PQA=0;PQR=0;PRO=0;QA=1049;QR=12534;RO=314;RPL=0;RPP=61.6401;RPPR=684.853;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=314;SRP=684.853;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1083:0:0:0,-8.12781,-97.7545 0/0:30:30,0:30:1210:0:0:0,-9.0309,-109.172 0/0:64:64,0:64:2539:0:0:0,-19.2659,-228.637 0/0:70:70,0:70:2787:0:0:0,-21.0721,-250.947 0/1:67:49,18:49:1964:18:697:-42.8872,0,-156.779 0/1:83:74,9:74:2951:9:352:-7.04866,0,-240.694 dDocent_Contig_4713 55 . A T 3412.72 . AB=0.150035;ABP=1527.45;AC=2;AF=0.166667;AN=12;AO=256;CIGAR=1X;DP=3549;DPB=3549;DPRA=0;EPP=558.907;EPPR=7053.78;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.999076;PAO=0;PQA=0;PQR=0;PRO=0;QA=10262;QR=127850;RO=3247;RPL=256;RPP=558.907;RPPR=7053.78;RPR=0;RUN=1;SAF=256;SAP=558.907;SAR=0;SRF=3247;SRP=7053.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:490:465,11:465:18167:11:428:0,-104.796,-1594.8 0/0:594:581,1:581:22962:1:40:0,-171.601,-2060.72 0/0:396:380,8:380:15049:8:327:0,-87.4028,-1323.48 0/0:636:606,21:606:23722:21:853:0,-112.066,-2056.01 0/1:709:614,95:614:24123:95:3837:-131.885,0,-1955.66 0/1:724:601,120:601:23827:120:4777:-212.608,0,-1925.24 dDocent_Contig_4714 184 . T C 2987.26 . AB=0.460993;ABP=6.73722;AC=6;AF=0.5;AN=12;AO=130;CIGAR=1X;DP=282;DPB=282;DPRA=0;EPP=285.302;EPPR=333.074;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.746154;PAIREDR=0.940789;PAO=0;PQA=0;PQR=0;PRO=0;QA=4366;QR=5123;RO=152;RPL=130;RPP=285.302;RPPR=333.074;RPR=0;RUN=1;SAF=0;SAP=285.302;SAR=130;SRF=0;SRP=333.074;SRR=152;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:46:22,24:22:756:24:808:-59.1869,0,-54.5118 0/1:46:20,26:20:678:26:869:-64.6731,0,-47.4895 0/1:76:58,18:58:1926:18:612:-32.524,0,-150.738 0/1:21:11,10:11:374:10:340:-24.6085,0,-27.6666 0/1:41:18,23:18:621:23:769:-57.1816,0,-43.8722 0/1:52:23,29:23:768:29:968:-71.7742,0,-53.7761 dDocent_Contig_4715 35 . G A 9489.08 . AB=0.388339;ABP=101.453;AC=6;AF=0.5;AN=12;AO=353;CIGAR=1X;DP=909;DPB=909;DPRA=0;EPP=769.54;EPPR=1210.35;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13696;QR=21432;RO=556;RPL=0;RPP=769.54;RPPR=1210.35;RPR=353;RUN=1;SAF=353;SAP=769.54;SAR=0;SRF=556;SRP=1210.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:104:78,26:78:2999:26:1026:-61.3331,0,-238.729 0/1:240:125,115:125:4699:115:4461:-329.231,0,-350.632 0/1:122:87,35:87:3432:35:1363:-86.2172,0,-272.228 0/1:223:158,65:158:6168:65:2501:-158.129,0,-487.842 0/1:69:35,34:35:1373:34:1305:-96.9549,0,-103.065 0/1:151:73,78:73:2761:78:3040:-228.265,0,-203.179 dDocent_Contig_4716 22 . A T 554.015 . AB=0.104403;ABP=1083.67;AC=2;AF=0.166667;AN=12;AO=112;CIGAR=1X;DP=2056;DPB=2056;DPRA=0;EPP=246.215;EPPR=4211.32;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=59.9788;NS=6;NUMALT=1;ODDS=0;PAIRED=0.991071;PAIREDR=0.995356;PAO=0;PQA=0;PQR=0;PRO=0;QA=4474;QR=77157;RO=1938;RPL=0;RPP=246.215;RPPR=4211.32;RPR=112;RUN=1;SAF=112;SAP=246.215;SAR=0;SRF=1938;SRP=4211.32;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:274:264,9:264:10430:9:362:0,-49.367,-905.118 0/1:383:349,33:349:13887:33:1307:-2.52328,0,-1133.43 0/0:202:195,7:195:7801:7:286:0,-34.6932,-675.565 0/0:372:360,9:360:14310:9:358:0,-78.8285,-1254.25 0/0:413:408,4:408:16200:4:162:0,-109.41,-1439.8 0/1:412:362,50:362:14529:50:1999:-56.0789,0,-1182.45 dDocent_Contig_4717 29 . A G 370.704 . AB=0.294118;ABP=21.7871;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=184;DPB=184;DPRA=0.766917;EPP=35.5824;EPPR=369.989;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.866667;PAIREDR=0.887574;PAO=0;PQA=0;PQR=0;PRO=0;QA=610;QR=6718;RO=169;RPL=0;RPP=35.5824;RPPR=369.989;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=169;SRP=369.989;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1093:0:0:0,-8.42884,-98.6577 0/0:27:27,0:27:1057:0:0:0,-8.12781,-95.4176 0/0:38:38,0:38:1539:0:0:0,-11.4391,-138.746 0/0:40:40,0:40:1604:0:0:0,-12.0412,-144.595 0/1:25:22,3:22:862:3:122:-3.84674,0,-70.3508 0/1:26:14,12:14:563:12:488:-36.4445,0,-43.1835 dDocent_Contig_4718 26 . A C 62.4315 . AB=0.127273;ABP=69.3784;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=527;DPB=527;DPRA=0.933333;EPP=46.4397;EPPR=1103.95;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=793;QR=20290;RO=507;RPL=0;RPP=46.4397;RPPR=1103.95;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=507;SRP=1103.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:55:48,7:48:1920:7:263:-7.465,0,-156.444 0/0:66:64,2:64:2561:2:81:0,-12.1822,-222.929 0/0:77:76,1:76:3023:1:41:0,-19.0847,-268.05 0/0:74:71,3:71:2822:3:123:0,-10.8114,-242.626 0/0:93:93,0:93:3743:0:0:0,-27.9958,-336.873 0/0:162:155,7:155:6221:7:285:0,-22.7425,-533.615 dDocent_Contig_4719 98 . N T 215.117 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=219;QR=0;RO=0;RPL=8;RPP=20.3821;RPPR=0;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:81:-7.55936,-0.90309,0 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 1/1:2:0,2:0:0:2:66:-6.26818,-0.60206,0 1/1:2:0,2:0:0:2:43:-4.08448,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_4720 8 . T A 19816.7 . AB=0.505384;ABP=3.36104;AC=6;AF=0.5;AN=12;AO=704;CIGAR=1X;DP=1393;DPB=1393;DPRA=0;EPP=1531.73;EPPR=1496.98;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=26799;QR=26226;RO=688;RPL=0;RPP=1531.73;RPPR=1496.98;RPR=704;RUN=1;SAF=704;SAP=1531.73;SAR=0;SRF=688;SRP=1496.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:136:75,61:75:2873:61:2327:-168.709,0,-217.804 0/1:255:163,92:163:6217:92:3515:-239.718,0,-482.704 0/1:169:91,78:91:3483:78:2949:-214.714,0,-262.732 0/1:201:90,111:90:3409:111:4241:-321.263,0,-246.44 0/1:369:157,212:157:5973:212:8072:-615.214,0,-426.445 0/1:263:112,150:112:4271:150:5695:-433.273,0,-305.208 dDocent_Contig_4721 29 . A G 145.3 . AB=0.103586;ABP=345.61;AC=1;AF=0.0833333;AN=12;AO=26;CIGAR=1X3M1X;DP=1790;DPB=1790.6;DPRA=0.815465;EPP=59.4686;EPPR=3796.57;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.999428;PAO=0;PQA=0;PQR=0;PRO=0;QA=1012;QR=68978;RO=1747;RPL=0;RPP=59.4686;RPPR=3796.57;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=1747;SRP=3796.57;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:255:254,0:254:10028:0:0:0,-76.4616,-901.576 0|0:375:375,0:375:14803:0:0:0,-112.886,-1331.28 0|0:290:276,0:276:10882:0:0:0,-83.0843,-978.365 0|0:299:299,0:299:11793:0:0:0,-90.008,-1060.66 0|1:251:223,26:223:8827:26:1012:-16.0529,0,-718.657 0|0:320:320,0:320:12645:0:0:0,-96.3296,-1137.24 dDocent_Contig_4722 7 . A C 296.747 . AB=0.122222;ABP=337.707;AC=2;AF=0.166667;AN=12;AO=78;CIGAR=1X;DP=1210;DPB=1210;DPRA=0;EPP=172.385;EPPR=2458.95;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.769231;PAO=0;PQA=0;PQR=0;PRO=0;QA=3004;QR=43357;RO=1131;RPL=0;RPP=172.385;RPPR=2458.95;RPR=78;RUN=1;SAF=78;SAP=172.385;SAR=0;SRF=1131;SRP=2458.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:140:119,21:119:4544:21:799:-30.0885,0,-366.875 0/0:167:161,6:161:6158:6:232:0,-29.0231,-532.911 0/0:231:214,16:214:8213:16:619:0,-13.5388,-682.907 0/1:130:118,12:118:4543:12:462:-2.79668,0,-369.788 0/0:302:296,6:296:11334:6:233:0,-69.571,-998.285 0/0:240:223,17:223:8565:17:659:0,-12.6,-710.954 dDocent_Contig_4723 116 . C T 215.51 . AB=0.147436;ABP=171.439;AC=2;AF=0.166667;AN=12;AO=27;CIGAR=1X;DP=395;DPB=395;DPRA=1.18803;EPP=61.6401;EPPR=789.107;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=59.1885;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.972678;PAO=0;PQA=0;PQR=0;PRO=0;QA=919;QR=11742;RO=366;RPL=0;RPP=61.6401;RPPR=797.769;RPR=27;RUN=1;SAF=0;SAP=61.6401;SAR=27;SRF=1;SRP=789.107;SRR=365;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:46:45,1:45:1425:1:35:0,-10.3487,-125.031 0/1:70:63,7:63:2068:7:242:-1.04562,0,-164.039 0/1:86:69,16:69:2178:16:538:-23.0659,0,-168.002 0/0:76:73,3:73:2255:3:104:0,-13.1752,-189.308 0/0:66:65,0:65:2140:0:0:0,-19.5669,-192.761 0/0:51:51,0:51:1676:0:0:0,-15.3525,-151.119 dDocent_Contig_4724 21 . G T 129.341 . AB=0.333333;ABP=7.35324;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=149;DPB=149;DPRA=0.687023;EPP=16.0391;EPPR=313.531;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=217;QR=5637;RO=143;RPL=0;RPP=16.0391;RPPR=313.531;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=143;SRP=313.531;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:988:0:0:0,-7.52575,-89.222 0/0:41:41,0:41:1632:0:0:0,-12.3422,-147.116 0/0:23:23,0:23:903:0:0:0,-6.92369,-81.573 0/0:26:26,0:26:1014:0:0:0,-7.82678,-91.5572 0/1:18:12,6:12:469:6:217:-14.457,0,-37.1393 0/0:16:16,0:16:631:0:0:0,-4.81648,-57.1239 dDocent_Contig_4725 9 . G T 2354.98 . AB=0.262338;ABP=191.895;AC=4;AF=0.333333;AN=12;AO=112;CIGAR=2X;DP=656;DPB=656;DPRA=2.85116;EPP=246.215;EPPR=1184.29;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998162;PAO=0;PQA=0;PQR=0;PRO=0;QA=4369;QR=20993;RO=544;RPL=0;RPP=246.215;RPPR=1184.29;RPR=112;RUN=1;SAF=112;SAP=246.215;SAR=0;SRF=544;SRP=1184.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:43:43,0:43:1670:0:0:0,-12.9443,-150.551 0|1:82:65,17:65:2499:17:666:-35.5887,0,-200.409 0|1:42:38,4:38:1491:4:157:-1.86554,0,-121.81 0|1:102:83,19:83:3192:19:742:-36.4024,0,-256.71 0|1:159:98,61:98:3714:61:2404:-168.679,0,-286.491 0|0:228:217,11:217:8427:11:400:0,-32.3023,-721.792 dDocent_Contig_4726 13 . T G 72.6939 . AB=0.133333;ABP=55.5599;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=209;DPB=209;DPRA=1.37195;EPP=16.0391;EPPR=443.819;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.694581;PAO=0;PQA=0;PQR=0;PRO=0;QA=244;QR=8160;RO=203;RPL=0;RPP=16.0391;RPPR=443.819;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=203;SRP=443.819;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:880:0:0:0,-6.62266,-79.507 0/0:45:45,0:45:1814:0:0:0,-13.5463,-163.462 0/0:39:39,0:39:1575:0:0:0,-11.7402,-141.978 0/1:45:39,6:39:1568:6:244:-8.79227,0,-127.808 0/0:31:31,0:31:1244:0:0:0,-9.33193,-112.228 0/0:27:27,0:27:1079:0:0:0,-8.12781,-97.3966 dDocent_Contig_4727 98 . N A 108.869 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=106;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:67:-6.36304,-0.60206,0 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 dDocent_Contig_4728 50 . A G 757.329 . AB=0.133612;ABP=561.523;AC=4;AF=0.333333;AN=12;AO=64;CIGAR=1X;DP=717;DPB=717;DPRA=1.0063;EPP=141.985;EPPR=1418.81;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.96875;PAIREDR=0.943252;PAO=0;PQA=0;PQR=0;PRO=0;QA=2507;QR=25428;RO=652;RPL=64;RPP=141.985;RPPR=1418.81;RPR=0;RUN=1;SAF=64;SAP=141.985;SAR=0;SRF=652;SRP=1418.81;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:100:89,11:89:3453:11:429:-8.85158,0,-280.738 0/1:149:127,21:127:4994:21:818:-29.282,0,-404.742 0/1:93:78,15:78:3023:15:589:-25.348,0,-244.181 0/1:137:120,17:120:4700:17:671:-19.4732,0,-381.698 0/0:105:105,0:105:4092:0:0:0,-31.6081,-368.285 0/0:133:133,0:133:5166:0:0:0,-40.037,-464.846 dDocent_Contig_4729 39 . C T 31687.2 . AB=0.463372;ABP=29.8934;AC=2;AF=0.166667;AN=12;AO=1069;CIGAR=1X;DP=5031;DPB=5031;DPRA=1.69383;EPP=2324.31;EPPR=8528.35;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998129;PAIREDR=0.995958;PAO=0;PQA=0;PQR=0;PRO=0;QA=43003;QR=158964;RO=3958;RPL=0;RPP=2324.31;RPPR=8459.29;RPR=1069;RUN=1;SAF=1069;SAP=2324.31;SAR=0;SRF=3950;SRP=8528.35;SRR=8;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:513:513,0:513:20589:0:0:0,-154.428,-1851.2 0/0:886:884,0:884:35554:0:0:0,-266.111,-3196.19 0/0:562:562,0:562:22549:0:0:0,-169.179,-2027.39 0/0:763:761,0:761:30603:0:0:0,-229.084,-2751.23 0/1:1144:549,595:549:22019:595:23991:-1812.59,0,-1635.37 0/1:1163:689,474:689:27650:474:19012:-1359.35,0,-2135.82 dDocent_Contig_4730 62 . T C 17593.1 . AB=0.705;ABP=295.03;AC=6;AF=0.5;AN=12;AO=564;CIGAR=1X;DP=800;DPB=800;DPRA=0;EPP=1227.72;EPPR=515.478;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=22347;QR=9236;RO=236;RPL=564;RPP=1227.72;RPPR=515.478;RPR=0;RUN=1;SAF=564;SAP=1227.72;SAR=0;SRF=236;SRP=515.478;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:100:24,76:24:948:76:3006:-240.532,0,-55.5234 0/1:116:35,81:35:1380:81:3228:-255.667,0,-89.5432 0/1:208:61,147:61:2393:147:5796:-458.844,0,-152.91 0/1:151:41,110:41:1569:110:4371:-347.886,0,-95.9955 0/1:116:26,90:26:1016:90:3553:-284.892,0,-56.8129 0/1:109:49,60:49:1930:60:2393:-182.711,0,-141.096 dDocent_Contig_4731 67 . G C 743.551 . AB=0.367089;ABP=15.1321;AC=1;AF=0.0833333;AN=12;AO=33;CIGAR=1X;DP=1058;DPB=1058;DPRA=0.188764;EPP=74.6689;EPPR=2228.77;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1255;QR=38695;RO=1025;RPL=33;RPP=74.6689;RPPR=2228.77;RPR=0;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=1025;SRP=2228.77;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:87:87,0:87:3320:0:0:0,-26.1896,-298.947 0/0:48:45,3:45:1691:3:115:0,-3.72455,-141.724 0/0:41:40,1:40:1529:1:36:0,-8.74395,-134.279 0/1:79:50,29:50:1892:29:1104:-75.878,0,-146.739 0/0:316:316,0:316:11912:0:0:0,-95.1255,-1071.63 0/0:487:487,0:487:18351:0:0:0,-146.602,-1650.7 dDocent_Contig_4732 98 . N C 398.86 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=15;CIGAR=1X;DP=15;DPB=15;DPRA=0;EPP=35.5824;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=424;QR=0;RO=0;RPL=15;RPP=35.5824;RPPR=0;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:8:0,8:0:0:8:229:-20.8906,-2.40824,0 1/1:2:0,2:0:0:2:57:-5.41432,-0.60206,0 1/1:2:0,2:0:0:2:61:-5.79353,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:77:-7.18487,-0.90309,0 ./.:.:.:.:.:.:.:. dDocent_Contig_4733 98 . N C 222.073 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=7;CIGAR=2X;DP=7;DPB=11;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=9.4572;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=243;QR=0;RO=0;RPL=7;RPP=18.2106;RPPR=0;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:7:0,7:0:0:7:243:-22.2073,-2.10721,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_4734 30 . T C 1666.11 . AB=0.188889;ABP=381.329;AC=3;AF=0.25;AN=12;AO=101;CIGAR=1X;DP=702;DPB=702;DPRA=0;EPP=222.329;EPPR=1308.07;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4046;QR=24103;RO=601;RPL=0;RPP=222.329;RPPR=1308.07;RPR=101;RUN=1;SAF=101;SAP=222.329;SAR=0;SRF=601;SRP=1308.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:70:65,5:65:2596:5:203:0,-2.41904,-215.106 0/0:67:65,2:65:2602:2:81:0,-12.4833,-226.622 0/1:36:28,8:28:1131:8:315:-17.8754,0,-91.2321 0/1:97:88,9:88:3527:9:367:-4.19535,0,-288.254 0/0:115:106,9:106:4270:9:357:0,-2.12715,-351.746 0/1:317:249,68:249:9977:68:2723:-149.761,0,-801.83 dDocent_Contig_4735 63 . A G 1779.99 . AB=0.314655;ABP=72.2353;AC=4;AF=0.333333;AN=12;AO=81;CIGAR=1X;DP=371;DPB=371;DPRA=0;EPP=178.9;EPPR=632.737;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3148;QR=11445;RO=290;RPL=81;RPP=178.9;RPPR=632.737;RPR=0;RUN=1;SAF=81;SAP=178.9;SAR=0;SRF=290;SRP=632.737;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:61:35,26:35:1350:26:998:-71.7367,0,-103.387 0/1:64:53,11:53:2086:11:404:-17.4253,0,-168.659 0/1:26:16,10:16:641:10:406:-29.0736,0,-50.1983 0/1:81:55,26:55:2176:26:1012:-66.985,0,-171.63 0/0:56:52,4:52:2063:4:164:0,-1.70778,-170.706 0/0:83:79,4:79:3129:4:164:0,-9.83559,-266.534 dDocent_Contig_4736 15 . T A 3883.21 . AB=0.139695;ABP=2295.42;AC=3;AF=0.25;AN=12;AO=297;CIGAR=1X;DP=3501;DPB=3501;DPRA=1.13881;EPP=647.938;EPPR=6956.06;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.981262;PAO=0;PQA=0;PQR=0;PRO=0;QA=11688;QR=127144;RO=3202;RPL=0;RPP=647.938;RPPR=6956.06;RPR=297;RUN=1;SAF=297;SAP=647.938;SAR=0;SRF=3202;SRP=6956.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:648:564,84:564:22409:84:3318:-103.627,0,-1819.88 0/1:714:623,90:623:24648:90:3537:-103.328,0,-2001.2 0/0:459:450,9:450:17883:9:358:0,-105.59,-1575.46 0/1:671:560,110:560:22354:110:4319:-186.588,0,-1807.86 0/0:523:523,0:523:20752:0:0:0,-157.439,-1865.97 0/0:486:482,4:482:19098:4:156:0,-131.886,-1702.9 dDocent_Contig_4737 37 . C A 3866.49 . AB=0.188592;ABP=918.603;AC=2;AF=0.166667;AN=12;AO=301;CIGAR=1X;DP=3812;DPB=3812;DPRA=0.734314;EPP=656.623;EPPR=7622.71;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.996678;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11645;QR=136252;RO=3509;RPL=0;RPP=656.623;RPPR=7622.71;RPR=301;RUN=1;SAF=301;SAP=656.623;SAR=0;SRF=3509;SRP=7622.71;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:453:423,30:423:16452:30:1164:0,-31.3197,-1374.61 0/1:616:510,106:510:19802:106:4105:-184.025,0,-1595.4 0/1:471:372,99:372:14410:99:3862:-205.846,0,-1154.26 0/0:608:563,45:563:21671:45:1694:0,-30.3391,-1796.25 0/0:816:815,0:815:31892:0:0:0,-245.339,-2867.41 0/0:848:826,21:826:32025:21:820:0,-181.186,-2805.72 dDocent_Contig_4738 129 . T A 531.349 . AB=0.158416;ABP=310.091;AC=3;AF=0.25;AN=12;AO=55;CIGAR=1X;DP=718;DPB=718;DPRA=0.591185;EPP=122.441;EPPR=1442.7;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1879;QR=22983;RO=663;RPL=0;RPP=122.441;RPPR=1442.7;RPR=55;RUN=1;SAF=0;SAP=122.441;SAR=55;SRF=0;SRP=1442.7;SRR=663;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:86:79,7:79:2780:7:228:0,-5.05022,-229.603 0/1:87:65,22:65:2250:22:755:-42.0792,0,-176.573 0/1:79:70,9:70:2433:9:310:-4.45284,0,-195.446 0/1:137:120,17:120:4178:17:586:-11.8244,0,-334.962 0/0:164:164,0:164:5671:0:0:0,-49.3689,-510.522 0/0:165:165,0:165:5671:0:0:0,-49.6699,-510.52 dDocent_Contig_4739 27 . G A 154.6 . AB=0.122951;ABP=153.661;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1X;DP=803;DPB=803;DPRA=2.02516;EPP=44.2683;EPPR=1705.44;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.5421;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.959184;PAO=0;PQA=0;PQR=0;PRO=0;QA=754;QR=31123;RO=784;RPL=0;RPP=44.2683;RPPR=1705.44;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=784;SRP=1705.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:87:87,0:87:3398:0:0:0,-26.1896,-305.89 0/0:109:107,2:107:4290:2:80:0,-25.2205,-373.376 0/1:122:107,15:107:4237:15:593:-16.9829,0,-339.734 0/0:292:291,1:291:11536:1:40:0,-83.9051,-1032.16 0/0:72:72,0:72:2864:0:0:0,-21.6742,-257.849 0/0:121:120,1:120:4798:1:41:0,-32.3301,-426.559 dDocent_Contig_4740 24 . T C 162.49 . AB=0.176471;ABP=49.3776;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=320;DPB=320;DPRA=1.13265;EPP=31.2394;EPPR=669.652;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.769231;PAIREDR=0.954397;PAO=0;PQA=0;PQR=0;PRO=0;QA=526;QR=12353;RO=307;RPL=0;RPP=31.2394;RPPR=669.652;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=307;SRP=669.652;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:58:57,1:57:2302:1:40:0,-13.4641,-203.332 0/1:51:42,9:42:1691:9:364:-17.7719,0,-137.058 0/0:42:40,2:40:1619:2:81:0,-4.95753,-138.251 0/0:71:70,1:70:2808:1:41:0,-17.2786,-248.728 0/0:37:37,0:37:1490:0:0:0,-11.1381,-134.341 0/0:61:61,0:61:2443:0:0:0,-18.3628,-220.015 dDocent_Contig_4741 9 . G A 191.977 . AB=0.151261;ABP=128.718;AC=1;AF=0.0833333;AN=12;AO=54;CIGAR=1X7M3I3M1X1M1X;DP=787;DPB=807.357;DPRA=0;EPP=120.27;EPPR=1488.3;GTI=0;LEN=1;MEANALT=3.33333;MQM=12.0185;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.925439;PAO=0;PQA=0;PQR=0;PRO=0;QA=649;QR=26740;RO=684;RPL=0;RPP=120.27;RPPR=1488.3;RPR=54;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=684;SRP=1488.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:117:107,0,6:107:4177:0,6:0,76:0,-32.2102,-375.828,-28.7375,-372.352,-370.546 0|0:119:106,3,4:106:4114:3,4:120,56:0,-24.5497,-361.858,-29.1652,-359.987,-366.108 0|0:111:101,2,8:101:3970:2,8:76,105:0,-25.5283,-351.738,-25.5883,-347.386,-349.812 0|0:147:144,0,3:144:5671:0,3:0,40:0,-43.3483,-510.17,-41.3322,-508.264,-507.361 0|1:119:77,18,18:77:3013:18,18:708,217:-20.7206,0,-242.545,-34.4546,-238.501,-276.878 0|0:174:149,10,15:149:5795:10,15:397,155:0,-20.3689,-493.848,-39.2615,-491.158,-511.03 dDocent_Contig_4742 8 . T G 30365.3 . AB=0.254604;ABP=656.311;AC=6;AF=0.5;AN=12;AO=318;CIGAR=2X;DP=1249;DPB=1249;DPRA=0;EPP=693.539;EPPR=289.645;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.930818;PAIREDR=0.969697;PAO=0;PQA=0;PQR=0;PRO=0;QA=12066;QR=5047;RO=132;RPL=0;RPP=693.539;RPPR=289.645;RPR=318;RUN=1;SAF=318;SAP=693.539;SAR=0;SRF=132;SRP=289.645;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:140:14,42,84:14:510:42,84:1600,3195:-347.431,-220.399,-249.408,-89.6083,0,-105.972 1|0:195:19,69,107:19:731:69,107:2625,4102:-486.224,-276.649,-315.896,-155.273,0,-183.081 1|0:171:17,55,99:17:662:55,99:2090,3792:-423.058,-256.778,-294.633,-116.978,0,-141.589 1|0:220:21,60,139:21:805:60,139:2276,5330:-551.697,-371.397,-419.405,-120.549,0,-144.777 1|0:225:31,41,153:31:1186:41,153:1536,5854:-499.511,-383.051,-468.032,-28.4621,0,-79.7308 1|0:298:30,51,216:30:1153:51,216:1939,8335:-739.836,-589.842,-669.145,-64.3661,0,-94.0011 dDocent_Contig_4743 1 . N G 76.8682 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_4744 106 . N T 3122.4 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=117;CIGAR=2X;DP=117;DPB=117;DPRA=0;EPP=257.073;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3449;QR=0;RO=0;RPL=0;RPP=257.073;RPPR=0;RPR=117;RUN=1;SAF=0;SAP=257.073;SAR=117;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:44:0,44:0:0:44:1306:-117.815,-13.2453,0 1|1:50:0,50:0:0:50:1450:-130.766,-15.0515,0 1|1:15:0,15:0:0:15:452:-40.9729,-4.51545,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:8:0,8:0:0:8:241:-21.9871,-2.40824,0 dDocent_Contig_4745 16 . G A 118.955 . AB=0.166667;ABP=49.335;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=103;DPB=103;DPRA=1.74545;EPP=20.3821;EPPR=209.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.989474;PAO=0;PQA=0;PQR=0;PRO=0;QA=320;QR=3794;RO=95;RPL=0;RPP=20.3821;RPPR=209.3;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=95;SRP=209.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:8,4:8:311:4:157:-10.8956,0,-24.7381 0/0:8:8,0:8:317:0:0:0,-2.40824,-28.8955 0/0:9:9,0:9:361:0:0:0,-2.70927,-32.853 0/0:14:14,0:14:571:0:0:0,-4.21442,-51.7319 0/0:24:24,0:24:972:0:0:0,-7.22472,-87.7781 0/1:36:32,4:32:1262:4:163:-4.22135,0,-103.005 dDocent_Contig_4747 140 . N G 8140.29 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=244;CIGAR=1X;DP=244;DPB=244;DPRA=0;EPP=532.85;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=0;NS=6;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=9779;QR=0;RO=0;RPL=244;RPP=532.85;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=532.85;SAR=244;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:29:0,29:0:0:29:1170:-97.2827,-8.72987,0 1/1:74:0,74:0:0:74:2977:-247.196,-22.2762,0 1/1:35:0,35:0:0:35:1389:-115.846,-10.5361,0 1/1:60:0,60:0:0:60:2399:-199.378,-18.0618,0 1/1:22:0,22:0:0:22:871:-72.6745,-6.62266,0 1/1:24:0,24:0:0:24:973:-80.8065,-7.22472,0 dDocent_Contig_4749 10 . C T 5780.91 . AB=0.17714;ABP=1674.39;AC=4;AF=0.333333;AN=12;AO=370;CIGAR=1X;DP=3187;DPB=3187;DPRA=0.838111;EPP=806.455;EPPR=6113.53;GTI=0;LEN=1;MEANALT=1.6;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992182;PAO=0;PQA=0;PQR=0;PRO=0;QA=14307;QR=111455;RO=2814;RPL=0;RPP=806.455;RPPR=6113.53;RPR=370;RUN=1;SAF=370;SAP=806.455;SAR=0;SRF=2814;SRP=6113.53;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:302:243,59:243:9553:59:2331:-119.053,0,-768.296 0/1:481:418,62:418:16643:62:2413:-72.7494,0,-1351.94 0/1:451:390,61:390:15420:61:2351:-76.0121,0,-1250.88 0/1:612:465,145:465:18421:145:5573:-317.498,0,-1472.41 0/0:614:614,0:614:24251:0:0:0,-184.832,-2180.53 0/0:727:684,43:684:27167:43:1639:0,-71.1006,-2294.9 dDocent_Contig_4750 10 . C G 684.417 . AB=0.2;ABP=143.722;AC=3;AF=0.25;AN=12;AO=36;CIGAR=1X;DP=958;DPB=958;DPRA=0.231362;EPP=81.1833;EPPR=2005.11;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.995662;PAO=0;PQA=0;PQR=0;PRO=0;QA=1409;QR=36837;RO=922;RPL=0;RPP=81.1833;RPPR=2005.11;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=922;SRP=2005.11;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:40,0:40:1578:0:0:0,-12.0412,-142.256 0/1:54:41,13:41:1658:13:512:-30.1667,0,-133.185 0/1:42:27,15:27:1072:15:584:-40.2495,0,-84.126 0/1:84:76,8:76:3041:8:313:-3.24311,0,-248.486 0/0:424:424,0:424:17029:0:0:0,-127.637,-1531.16 0/0:314:314,0:314:12459:0:0:0,-94.5234,-1120.41 dDocent_Contig_4751 52 . A G 872.999 . AB=0.171141;ABP=282.941;AC=3;AF=0.25;AN=12;AO=67;CIGAR=1X;DP=627;DPB=627;DPRA=0;EPP=148.499;EPPR=1219.03;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.940299;PAIREDR=0.894643;PAO=0;PQA=0;PQR=0;PRO=0;QA=2651;QR=22171;RO=560;RPL=67;RPP=148.499;RPPR=1219.03;RPR=0;RUN=1;SAF=67;SAP=148.499;SAR=0;SRF=560;SRP=1219.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:67:49,18:49:1911:18:708:-43.8707,0,-152.027 0/0:137:128,9:128:5078:9:364:0,-8.11635,-423.776 0/0:62:60,2:60:2417:2:78:0,-11.2611,-210.27 0/1:141:120,21:120:4777:21:823:-31.9224,0,-387.397 0/1:90:78,12:78:3033:12:483:-16.7286,0,-245.982 0/0:130:125,5:125:4955:5:195:0,-21.2118,-427.929 dDocent_Contig_4752 20 . G A 38.8467 . AB=0.0924855;ABP=252.554;AC=1;AF=0.0833333;AN=12;AO=34;CIGAR=1X;DP=1293;DPB=1293;DPRA=0;EPP=76.8404;EPPR=2736.89;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.264706;PAIREDR=0.699762;PAO=0;PQA=0;PQR=0;PRO=0;QA=1348;QR=50165;RO=1259;RPL=0;RPP=76.8404;RPPR=2736.89;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=1259;SRP=2736.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:196:195,1:195:7738:1:41:0,-54.9073,-691.93 0/0:194:190,4:190:7529:4:145:0,-45.0004,-663.838 0/1:173:157,16:157:6285:16:635:-5.40749,0,-513.302 0/0:318:314,4:314:12501:4:162:0,-80.7608,-1109.23 0/0:266:260,6:260:10381:6:242:0,-57.9167,-911.435 0/0:146:143,3:143:5731:3:123:0,-32.4856,-504.126 dDocent_Contig_4753 18 . C T 105.571 . AB=0.0953757;ABP=495.043;AC=2;AF=0.166667;AN=12;AO=34;CIGAR=1X;DP=685;DPB=685;DPRA=2.32524;EPP=76.8404;EPPR=1414.47;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.970588;PAIREDR=0.996923;PAO=0;PQA=0;PQR=0;PRO=0;QA=1344;QR=26162;RO=650;RPL=0;RPP=76.8404;RPPR=1414.47;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=650;SRP=1414.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:65:64,0:64:2572:0:0:0,-19.2659,-231.418 0/0:133:132,1:132:5303:1:41:0,-35.9424,-473.008 0/0:37:37,0:37:1497:0:0:0,-11.1381,-134.972 0/0:104:104,0:104:4182:0:0:0,-31.3071,-376.333 0/1:118:107,11:107:4299:11:438:-4.25074,0,-351.327 0/1:228:206,22:206:8309:22:865:-9.5278,0,-678.66 dDocent_Contig_4754 13 . T C 200.644 . AB=0.147727;ABP=97.8642;AC=1;AF=0.0833333;AN=12;AO=30;CIGAR=1X;DP=894;DPB=894;DPRA=0.795181;EPP=68.1545;EPPR=1879.16;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.989583;PAO=0;PQA=0;PQR=0;PRO=0;QA=1221;QR=34640;RO=864;RPL=0;RPP=68.1545;RPPR=1879.16;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=864;SRP=1879.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:88:75,13:75:3000:13:527:-21.2863,0,-243.593 0/0:134:134,0:134:5380:0:0:0,-40.338,-484.022 0/0:163:156,7:156:6298:7:284:0,-23.1341,-540.593 0/0:145:135,10:135:5385:10:410:0,-6.38879,-447.222 0/0:152:152,0:152:6086:0:0:0,-45.7566,-547.481 0/0:212:212,0:212:8491:0:0:0,-63.8184,-763.684 dDocent_Contig_4755 50 . T C 1301.09 . AB=0.185792;ABP=316.865;AC=2;AF=0.166667;AN=12;AO=98;CIGAR=1X;DP=1349;DPB=1349;DPRA=0.726364;EPP=215.815;EPPR=2719.52;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999201;PAO=0;PQA=0;PQR=0;PRO=0;QA=3895;QR=47833;RO=1251;RPL=98;RPP=215.815;RPPR=2719.52;RPR=0;RUN=1;SAF=98;SAP=215.815;SAR=0;SRF=1251;SRP=2719.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:180:166,14:166:6335:14:564:0,-3.08457,-518.908 0/0:253:237,16:237:9163:16:631:0,-19.0364,-767.163 0/1:165:120,45:120:4587:45:1795:-112.096,0,-363.164 0/1:201:178,23:178:6780:23:905:-21.2344,0,-549.53 0/0:276:276,0:276:10489:0:0:0,-83.0843,-943.553 0/0:274:274,0:274:10479:0:0:0,-82.4822,-942.652 dDocent_Contig_4756 15 . T G 494.085 . AB=0.114851;ABP=653.682;AC=1;AF=0.0833333;AN=12;AO=145;CIGAR=3X1M1X;DP=2643;DPB=2642.8;DPRA=0;EPP=317.874;EPPR=5399.12;GTI=0;LEN=1;MEANALT=2.83333;MQM=55.3655;MQMR=59.8789;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.987525;PAO=0;PQA=0;PQR=0;PRO=0;QA=5704;QR=97926;RO=2485;RPL=0;RPP=317.874;RPPR=5399.12;RPR=145;RUN=1;SAF=145;SAP=317.874;SAR=0;SRF=2485;SRP=5399.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:286:279,7:279:10958:7:279:0,-60.6485,-959.882 0|0:435:399,35:399:15711:35:1395:0,-5.94611,-1287.81 0|1:505:445,58:445:17576:58:2262:-50.9313,0,-1428.93 0|0:470:443,25:443:17434:25:973:0,-54.9012,-1480.84 0|0:480:467,7:467:18368:7:283:0,-117.21,-1625.81 0|0:467:452,13:452:17879:13:512:0,-93.989,-1561.41 dDocent_Contig_4757 1 . N G 77.8076 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_4758 25 . G T 91.9824 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=103;CIGAR=5M1X;DP=2286;DPB=2269.17;DPRA=1.43644;EPP=226.672;EPPR=3919.31;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=59.9535;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.964775;PAO=0;PQA=0;PQR=0;PRO=0;QA=4138;QR=80154;RO=2044;RPL=0;RPP=226.672;RPPR=4441.5;RPR=103;RUN=1;SAF=103;SAP=226.672;SAR=0;SRF=1982;SRP=3919.31;SRR=62;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:375:352,17,0:352:13759:17,0:558,0:0,-60.7883,-1186.98,-105.963,-1192.1,-1237.18 0|0:510:443,26,37:443:17351:26,37:900,1494:0,-60.2442,-1478.84,-10.1619,-1363.51,-1425.5 0|0:609:549,3,39:549:21672:3,39:79,1577:0,-159.068,-1941.34,-35.2304,-1812.23,-1806.69 0|0:497:445,20,27:445:17340:20,27:719,1067:0,-75.314,-1494.39,-46.1323,-1412.61,-1463.13 0|0:142:123,16,0:123:4844:16,0:579,0:-10.2886,0,-393.77,-47.3153,-398.586,-445.843 0|0:153:132,16,0:132:5188:16,0:519,0:-2.07445,0,-421.881,-41.8104,-426.697,-468.561 dDocent_Contig_4759 18 . G T 83.9294 . AB=0.114286;ABP=138.696;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=338;DPB=338;DPRA=0.888268;EPP=33.4109;EPPR=706.567;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.785714;PAIREDR=0.549383;PAO=0;PQA=0;PQR=0;PRO=0;QA=553;QR=12768;RO=324;RPL=0;RPP=33.4109;RPPR=706.567;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=324;SRP=706.567;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:63:63,0:63:2465:0:0:0,-18.9649,-222.021 0/1:73:66,7:66:2608:7:279:-3.50592,0,-212.896 0/0:47:47,0:47:1864:0:0:0,-14.1484,-167.973 0/0:54:52,2:52:2022:2:81:0,-8.56989,-174.489 0/1:32:27,5:27:1055:5:193:-8.10662,0,-85.6102 0/0:69:69,0:69:2754:0:0:0,-20.7711,-247.976 dDocent_Contig_4760 27 . G A 228.92 . AB=0.234043;ABP=31.8863;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=152;DPB=152;DPRA=0.6875;EPP=33.4109;EPPR=302.673;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.642857;PAIREDR=0.702899;PAO=0;PQA=0;PQR=0;PRO=0;QA=554;QR=5510;RO=138;RPL=0;RPP=33.4109;RPPR=302.673;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=138;SRP=302.673;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:17,6:17:691:6:241:-15.1424,0,-55.5946 0/1:24:19,5:19:768:5:198:-10.971,0,-62.2163 0/0:14:14,0:14:534:0:0:0,-4.21442,-48.3848 0/0:25:23,2:23:938:2:76:0,-0.312213,-77.5063 0/0:16:15,1:15:597:1:39:0,-0.919915,-50.1684 0/0:50:50,0:50:1982:0:0:0,-15.0515,-178.58 dDocent_Contig_4761 54 . G C 2744.88 . AB=0.293963;ABP=143.495;AC=4;AF=0.333333;AN=12;AO=112;CIGAR=1X;DP=617;DPB=617;DPRA=0.807203;EPP=246.215;EPPR=1095.26;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4393;QR=19853;RO=503;RPL=112;RPP=246.215;RPPR=1095.26;RPR=0;RUN=1;SAF=112;SAP=246.215;SAR=0;SRF=503;SRP=1095.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:85:52,32:52:2028:32:1226:-84.918,0,-157.038 0/1:131:95,36:95:3760:36:1432:-89.7008,0,-298.988 0/1:84:70,14:70:2760:14:542:-23.8262,0,-223.238 0/1:81:51,30:51:2014:30:1193:-83.2652,0,-157.077 0/0:211:210,0:210:8298:0:0:0,-63.2163,-745.981 0/0:25:25,0:25:993:0:0:0,-7.52575,-89.6694 dDocent_Contig_4762 14 . C T 6605.24 . AB=0.162557;ABP=1086.01;AC=3;AF=0.25;AN=12;AO=178;CIGAR=1X5M1X;DP=1095;DPB=1095;DPRA=0;EPP=389.532;EPPR=1082.36;GTI=0;LEN=1;MEANALT=7.83333;MQM=56.8989;MQMR=58.5;NS=6;NUMALT=5;ODDS=0;PAIRED=0.994382;PAIREDR=0.977941;PAO=0;PQA=0;PQR=0;PRO=0;QA=6931;QR=21257;RO=544;RPL=0;RPP=389.532;RPPR=1184.29;RPR=178;RUN=1;SAF=178;SAP=389.532;SAR=0;SRF=532;SRP=1082.36;SRR=12;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:136:67,0,0,11,8,42:67:2624:0,0,11,8,42:0,0,430,324,1677:-117.009,-137.178,-351.161,-137.178,-351.161,-351.161,-102.373,-316.355,-316.355,-313.044,-110.995,-324.978,-324.978,-290.172,-322.569,0,-213.987,-213.987,-179.181,-187.803,-201.344 0|0:247:111,0,0,44,11,77:111:4359:0,0,44,11,77:0,0,1684,417,3059:-215.261,-248.675,-603.9,-248.675,-603.9,-603.9,-110.534,-465.759,-465.759,-452.513,-217.194,-572.418,-572.418,-434.277,-569.106,0,-355.233,-355.233,-217.091,-323.751,-332.054 0|1:112:61,0,3,23,6,10:61:2369:0,3,23,6,10:0,117,906,241,402:-55.3884,-73.7513,-256.454,-64.1329,-246.836,-245.933,0,-182.713,-173.095,-175.789,-54.9584,-237.661,-228.044,-163.92,-235.855,-40.6154,-223.322,-213.704,-149.58,-204.53,-220.312 0|0:225:107,0,2,36,17,53:107:4191:0,2,36,17,53:0,72,1369,654,2109:-138.208,-170.418,-514.408,-164.544,-508.535,-507.933,-58.6406,-402.632,-396.758,-391.795,-119.353,-463.343,-457.469,-351.566,-458.225,0,-343.998,-338.124,-232.221,-292.932,-328.043 0|1:160:78,9,14,30,15,4:78:3044:9,14,30,15,4:361,553,1195,599,147:-73.8497,-70.0672,-317.039,-51.822,-274.242,-297.291,0,-222.423,-204.179,-240.655,-51.9595,-274.377,-256.133,-204.315,-297.124,-85.3135,-307.731,-289.488,-237.669,-289.623,-333.79 0|1:215:120,4,18,34,19,15:120:4670:4,18,34,19,15:159,718,1347,757,605:-72.0296,-96.0893,-478.473,-49.0187,-420.544,-427.19,0,-371.523,-324.455,-373.353,-50.7725,-422.293,-375.225,-326.205,-428.638,-58.2805,-429.806,-382.737,-333.716,-384.487,-437.355 dDocent_Contig_4763 8 . T C 15715.2 . AB=0.0434286;ABP=3171.63;AC=0;AF=0;AN=12;AO=76;CIGAR=2X4M1X10M;DP=1750;DPB=1749.76;DPRA=0;EPP=168.042;EPPR=1108.29;GTI=0;LEN=1;MEANALT=18;MQM=35.7895;MQMR=60;NS=6;NUMALT=8;ODDS=0;PAIRED=0;PAIREDR=0.998035;PAO=0;PQA=0;PQR=0;PRO=0;QA=2528;QR=19793;RO=509;RPL=0;RPP=168.042;RPPR=1108.29;RPR=76;RUN=1;SAF=76;SAP=168.042;SAR=0;SRF=509;SRP=1108.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:188:61,16,0,14,12,4,2,0,57:61:2361:16,0,14,12,4,2,0,57:598,0,519,449,136,78,0,2273:-168.07,-137.468,-326.589,-186.433,-331.405,-380.37,-144.836,-289.808,-338.773,-334.559,-149.664,-294.636,-343.601,-302.004,-339.989,-175.848,-320.819,-369.784,-328.187,-333.015,-368.58,-180.022,-324.993,-373.959,-332.361,-337.19,-363.373,-373.357,-186.433,-331.405,-380.37,-338.773,-343.601,-369.784,-373.959,-380.37,0,-144.978,-193.944,-152.346,-157.174,-183.358,-187.532,-193.944,-176.785 0|0:319:92,31,9,2,0,15,9,0,119:92:3558:31,9,2,0,15,9,0,119:1144,357,77,0,476,358,0,4646:-351.47,-285.611,-568.518,-349.776,-548.461,-639.305,-373.111,-571.796,-635.961,-664.747,-379.165,-577.85,-642.015,-665.349,-671.403,-343.932,-542.616,-606.78,-630.115,-636.169,-631.653,-349.687,-548.372,-612.537,-635.872,-641.926,-606.691,-639.216,-379.165,-577.85,-642.015,-665.349,-671.403,-636.169,-641.926,-671.403,0,-198.693,-262.858,-286.194,-292.248,-257.015,-262.769,-292.248,-256.425 0|0:204:43,24,20,2,0,14,1,0,71:43:1686:24,20,2,0,14,1,0,71:928,784,78,0,472,39,0,2828:-219.684,-156.401,-287.828,-168.154,-230.579,-300.785,-226.667,-289.092,-300.845,-364.716,-232.628,-295.052,-306.805,-365.318,-371.279,-197.788,-260.212,-271.964,-330.476,-336.437,-332.223,-229.422,-291.847,-303.599,-362.112,-368.073,-333.231,-367.772,-232.628,-295.052,-306.805,-365.318,-371.279,-336.437,-368.073,-371.279,0,-62.4281,-74.181,-132.695,-138.656,-103.817,-135.45,-138.656,-117.283 0|0:359:150,38,5,22,2,17,4,0,93:150:5849:38,5,22,2,17,4,0,93:1447,191,837,77,572,147,0,3534:-242.522,-168.991,-638.324,-272.005,-634.092,-751.27,-219.918,-582.006,-685.018,-694.067,-281.354,-643.441,-746.453,-694.367,-761.522,-245.028,-607.114,-710.126,-658.04,-719.474,-720.679,-275.663,-637.75,-740.762,-688.676,-750.11,-713.783,-755.229,-287.676,-649.763,-752.776,-700.689,-762.124,-725.797,-756.433,-768.447,0,-362.093,-465.105,-413.019,-474.454,-438.128,-468.763,-480.776,-452.781 0|0:316:107,14,0,23,13,9,11,22,86:107:4157:14,0,23,13,9,11,22,86:533,0,860,496,298,433,687,3431:-250.134,-238.626,-575.993,-282.344,-580.208,-623.925,-212.464,-510.328,-554.046,-547.122,-241.651,-539.515,-583.232,-513.353,-579.319,-260.041,-557.904,-601.622,-531.742,-560.929,-598.912,-246.723,-544.587,-588.305,-518.425,-547.612,-566.001,-584.993,-230.714,-528.576,-572.293,-502.414,-531.6,-549.99,-536.673,-565.67,0,-297.873,-341.591,-271.711,-300.898,-319.288,-305.97,-289.96,-315.702 0|0:364:56,35,0,23,10,17,35,19,116:56:2182:35,0,23,10,17,35,19,116:1311,0,853,370,574,1361,562,4499:-350.864,-260.354,-429.159,-367.722,-439.695,-547.063,-298.122,-370.095,-477.463,-470.539,-337.457,-409.43,-516.797,-447.198,-513.787,-324.755,-396.728,-504.095,-434.495,-473.83,-498.978,-255.882,-327.855,-435.223,-365.623,-404.958,-392.256,-424.687,-327.018,-398.991,-506.358,-436.758,-476.093,-463.391,-394.519,-500.638,0,-71.9757,-179.344,-109.744,-149.079,-136.378,-67.5025,-138.642,-144.424 dDocent_Contig_4764 9 . G C 546.167 . AB=0.226891;ABP=80.1067;AC=2;AF=0.166667;AN=12;AO=27;CIGAR=1X;DP=303;DPB=303;DPRA=1.29348;EPP=61.6401;EPPR=602.337;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1033;QR=10520;RO=276;RPL=0;RPP=61.6401;RPPR=602.337;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=276;SRP=602.337;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:942:0:0:0,-7.52575,-85.0883 0/1:46:37,9:37:1406:9:351:-18.1044,0,-112.974 0/0:40:40,0:40:1523:0:0:0,-12.0412,-137.342 0/1:73:55,18:55:2086:18:682:-39.7341,0,-165.998 0/0:38:38,0:38:1465:0:0:0,-11.4391,-132.126 0/0:81:81,0:81:3098:0:0:0,-24.3834,-278.978 dDocent_Contig_4765 62 . C T 692.457 . AB=0.242647;ABP=81.2472;AC=1;AF=0.0833333;AN=12;AO=41;CIGAR=1X;DP=492;DPB=492;DPRA=2.51376;EPP=92.0407;EPPR=980.173;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997778;PAO=0;PQA=0;PQR=0;PRO=0;QA=1509;QR=16573;RO=450;RPL=41;RPP=92.0407;RPPR=980.173;RPR=0;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=450;SRP=980.173;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:63:63,0:63:2293:0:0:0,-18.9649,-206.58 0/1:136:103,33:103:3857:33:1238:-70.7686,0,-306.276 0/0:78:77,0:77:2871:0:0:0,-23.1793,-258.408 0/0:138:130,8:130:4749:8:271:0,-16.829,-402.734 0/0:39:39,0:39:1416:0:0:0,-11.7402,-127.702 0/0:38:38,0:38:1387:0:0:0,-11.4391,-125.095 dDocent_Contig_4766 18 . T C 87.3163 . AB=0.0914634;ABP=478.51;AC=1;AF=0.0833333;AN=12;AO=30;CIGAR=1X;DP=2134;DPB=2134;DPRA=0.908084;EPP=68.1545;EPPR=4567.45;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998097;PAO=0;PQA=0;PQR=0;PRO=0;QA=1208;QR=84343;RO=2102;RPL=0;RPP=68.1545;RPPR=4567.45;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=2102;SRP=4567.45;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:268:268,0:268:10785:0:0:0,-80.676,-969.89 0/1:328:298,30:298:12001:30:1208:-10.2545,0,-980.45 0/0:184:184,0:184:7341:0:0:0,-55.3895,-660.304 0/0:404:403,0:403:16112:0:0:0,-121.315,-1448.39 0/0:342:341,0:341:13635:0:0:0,-102.651,-1225.94 0/0:608:608,0:608:24469:0:0:0,-183.026,-2199.97 dDocent_Contig_4767 33 . T G 1206.17 . AB=0.278409;ABP=78.0742;AC=2;AF=0.166667;AN=12;AO=69;CIGAR=1X;DP=710;DPB=710;DPRA=1.59747;EPP=152.842;EPPR=1392.75;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996875;PAO=0;PQA=0;PQR=0;PRO=0;QA=2740;QR=25418;RO=640;RPL=0;RPP=152.842;RPPR=1392.75;RPR=69;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=640;SRP=1392.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:79:79,0:79:3131:0:0:0,-23.7814,-281.859 0/0:147:143,4:143:5655:4:163:0,-29.193,-493.719 0/0:159:152,7:152:6056:7:276:0,-22.6579,-519.605 0/0:149:139,9:139:5508:9:343:0,-13.7119,-464.321 0/1:65:41,24:41:1641:24:962:-67.3146,0,-128.351 0/1:111:86,25:86:3427:25:996:-56.5243,0,-275.059 dDocent_Contig_4768 63 . G A 3200.04 . AB=0.338422;ABP=92.1291;AC=5;AF=0.416667;AN=12;AO=133;CIGAR=1X;DP=455;DPB=455;DPRA=1.26774;EPP=291.816;EPPR=693.539;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.971698;PAO=0;PQA=0;PQR=0;PRO=0;QA=4946;QR=11485;RO=318;RPL=133;RPP=291.816;RPPR=693.539;RPR=0;RUN=1;SAF=133;SAP=291.816;SAR=0;SRF=318;SRP=693.539;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:139:104,31:104:3571:31:1120:-60.1206,0,-280.592 0/1:50:41,9:41:1445:9:318:-13.9073,0,-115.291 0/0:62:62,0:62:2313:0:0:0,-18.6639,-208.385 0/1:27:14,13:14:513:13:487:-36.0436,0,-38.3789 0/1:87:39,48:39:1476:48:1824:-138.223,0,-106.925 0/1:90:58,32:58:2167:32:1197:-80.9313,0,-168.165 dDocent_Contig_4769 77 . T G 369.494 . AB=0.137615;ABP=251.674;AC=3;AF=0.25;AN=12;AO=39;CIGAR=1X;DP=645;DPB=645;DPRA=0.408491;EPP=87.6977;EPPR=1318.92;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1491;QR=23733;RO=606;RPL=39;RPP=87.6977;RPPR=1318.92;RPR=0;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=606;SRP=1318.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:45:41,4:41:1568:4:125:0,-1.99339,-129.834 0/1:65:52,13:52:2009:13:500:-25.7805,0,-161.479 0/1:57:52,5:52:2089:5:199:-1.12965,0,-171.032 0/1:96:84,12:84:3353:12:477:-14.381,0,-272.925 0/0:212:212,0:212:8126:0:0:0,-63.8184,-731.12 0/0:170:165,5:165:6588:5:190:0,-33.7135,-575.162 dDocent_Contig_4770 26 . T A 558.41 . AB=0.109568;ABP=860.997;AC=2;AF=0.166667;AN=12;AO=109;CIGAR=1X;DP=2235;DPB=2235;DPRA=1.01014;EPP=239.701;EPPR=4619.56;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4354;QR=84973;RO=2126;RPL=0;RPP=239.701;RPPR=4619.56;RPR=109;RUN=1;SAF=109;SAP=239.701;SAR=0;SRF=2126;SRP=4619.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:247:211,36:211:8428:36:1429:-54.5061,0,-683.698 0/1:401:366,35:366:14638:35:1389:-4.55654,0,-1195.58 0/0:427:405,22:405:16284:22:890:0,-48.1336,-1383.81 0/0:420:404,16:404:16132:16:646:0,-67.9583,-1392.1 0/0:319:319,0:319:12752:0:0:0,-96.0286,-1146.75 0/0:421:421,0:421:16739:0:0:0,-126.734,-1505.18 dDocent_Contig_4771 45 . C T 147.672 . AB=0.125;ABP=130.041;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=471;DPB=471;DPRA=1.41689;EPP=31.2394;EPPR=997.545;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.769231;PAIREDR=0.611354;PAO=0;PQA=0;PQR=0;PRO=0;QA=525;QR=18173;RO=458;RPL=0;RPP=31.2394;RPPR=997.545;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=458;SRP=997.545;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:53:53,0:53:2061:0:0:0,-15.9546,-185.676 0/0:101:101,0:101:3971:0:0:0,-30.404,-357.38 0/0:56:56,0:56:2242:0:0:0,-16.8577,-201.946 0/0:90:90,0:90:3579:0:0:0,-27.0927,-322.134 0/0:67:67,0:67:2695:0:0:0,-20.169,-242.663 0/1:104:91,13:91:3625:13:525:-16.2901,0,-294.964 dDocent_Contig_4773 54 . C A 409.248 . AB=0.109204;ABP=853.309;AC=1;AF=0.0833333;AN=12;AO=132;CIGAR=1X;DP=3811;DPB=3811;DPRA=1.11869;EPP=289.645;EPPR=7985.34;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=59.9981;NS=6;NUMALT=1;ODDS=0;PAIRED=0.984848;PAIREDR=0.994559;PAO=0;PQA=0;PQR=0;PRO=0;QA=4995;QR=145831;RO=3676;RPL=132;RPP=289.645;RPPR=7985.34;RPR=0;RUN=1;SAF=132;SAP=289.645;SAR=0;SRF=3676;SRP=7985.34;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:578:577,0:577:22996:0:0:0,-173.694,-2067.61 0/0:721:716,5:716:28181:5:168:0,-201.599,-2518.41 0/0:468:455,11:455:18067:11:430:0,-101.54,-1585.56 0/0:812:800,12:800:31853:12:461:0,-202.599,-2822.08 0/0:591:557,34:557:22094:34:1322:0,-58.6566,-1867.35 0/1:641:571,70:571:22640:70:2614:-42.4477,0,-1842.75 dDocent_Contig_4774 23 . C A 116.588 . AB=0.214286;ABP=22.8638;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=188;DPB=188;DPRA=0.89899;EPP=20.3821;EPPR=393.875;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0;PAIREDR=0.616667;PAO=0;PQA=0;PQR=0;PRO=0;QA=318;QR=7169;RO=180;RPL=0;RPP=20.3821;RPPR=393.875;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=180;SRP=393.875;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:1001:0:0:0,-7.52575,-90.386 0/1:28:22,6:22:864:6:236:-13.1817,0,-69.6365 0/0:29:28,1:28:1111:1:41:0,-4.6353,-96.1742 0/0:32:31,1:31:1245:1:41:0,-5.53839,-108.22 0/0:30:30,0:30:1215:0:0:0,-9.0309,-109.619 0/0:44:44,0:44:1733:0:0:0,-13.2453,-156.191 dDocent_Contig_4775 1 . N G 77.8076 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_4776 31 . T C 2767.52 . AB=0.117849;ABP=3328.97;AC=3;AF=0.25;AN=12;AO=401;CIGAR=1X;DP=4583;DPB=4583;DPRA=0;EPP=873.771;EPPR=9068.91;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999521;PAO=0;PQA=0;PQR=0;PRO=0;QA=15351;QR=148681;RO=4175;RPL=0;RPP=873.771;RPPR=9068.91;RPR=401;RUN=1;SAF=401;SAP=873.771;SAR=0;SRF=4175;SRP=9068.91;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:519:474,45:474:16711:45:1715:0,-1.66381,-1348.92 0/1:971:849,120:849:30147:120:4625:-124.421,0,-2420.19 0/1:509:436,72:436:15678:72:2720:-91.9106,0,-1257.52 0/1:1142:1023,117:1023:36273:117:4544:-65.6426,0,-2919.8 0/0:717:671,45:671:23990:45:1721:0,-60.8147,-2003.07 0/0:725:722,2:722:25882:2:26:0,-215.586,-2325.88 dDocent_Contig_4777 98 . N T 1754.68 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=57;CIGAR=1X;DP=57;DPB=57;DPRA=0;EPP=126.784;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1919;QR=0;RO=0;RPL=57;RPP=126.784;RPPR=0;RPR=0;RUN=1;SAF=57;SAP=126.784;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:101:-9.42377,-0.90309,0 1/1:22:0,22:0:0:22:727:-65.7385,-6.62266,0 1/1:16:0,16:0:0:16:540:-48.9195,-4.81648,0 1/1:5:0,5:0:0:5:171:-15.7266,-1.50515,0 1/1:8:0,8:0:0:8:275:-25.0848,-2.40824,0 1/1:3:0,3:0:0:3:105:-9.79616,-0.90309,0 dDocent_Contig_4778 7 . A C 1709.05 . AB=0.118176;ABP=2113.95;AC=5;AF=0.416667;AN=12;AO=225;CIGAR=1X;DP=2011;DPB=2011;DPRA=0;EPP=491.592;EPPR=3874.75;GTI=0;LEN=1;MEANALT=1.5;MQM=58.8889;MQMR=58.7532;NS=6;NUMALT=1;ODDS=0;PAIRED=0.848889;PAIREDR=0.828379;PAO=0;PQA=0;PQR=0;PRO=0;QA=8652;QR=67975;RO=1783;RPL=0;RPP=491.592;RPPR=3874.75;RPR=225;RUN=1;SAF=225;SAP=491.592;SAR=0;SRF=1783;SRP=3874.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:296:258,38:258:9800:38:1435:-39.9704,0,-791.477 0/1:485:437,48:437:16689:48:1855:-21.0801,0,-1348.34 0/1:234:209,25:209:7977:25:969:-17.0603,0,-645.844 0/1:364:321,41:321:12198:41:1577:-32.7852,0,-980.243 0/1:288:242,45:242:9253:45:1733:-69.2304,0,-744.765 0/0:344:316,28:316:12058:28:1083:0,-5.8163,-983.897 dDocent_Contig_4779 41 . G T 269.514 . AB=0.134146;ABP=193.676;AC=2;AF=0.166667;AN=12;AO=34;CIGAR=1X;DP=511;DPB=511;DPRA=1.325;EPP=76.8404;EPPR=1038.8;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.735294;PAIREDR=0.685535;PAO=0;PQA=0;PQR=0;PRO=0;QA=1353;QR=18884;RO=477;RPL=0;RPP=76.8404;RPPR=1038.8;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=477;SRP=1038.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:38,0:38:1527:0:0:0,-11.4391,-137.665 0/1:92:80,12:80:3195:12:475:-15.399,0,-259.93 0/1:72:62,10:62:2442:10:401:-14.7742,0,-198.251 0/0:123:115,8:115:4523:8:319:0,-7.94946,-377.934 0/0:84:80,4:80:3138:4:158:0,-10.6879,-267.896 0/0:102:102,0:102:4059:0:0:0,-30.7051,-365.287 dDocent_Contig_4780 9 . G A 24869.5 . AB=0.559508;ABP=50.5636;AC=6;AF=0.5;AN=12;AO=865;CIGAR=1X;DP=1546;DPB=1546;DPRA=0;EPP=1881.33;EPPR=1481.78;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997688;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=32929;QR=26056;RO=681;RPL=0;RPP=1881.33;RPPR=1481.78;RPR=865;RUN=1;SAF=865;SAP=1881.33;SAR=0;SRF=681;SRP=1481.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:241:123,118:123:4664:118:4465:-329.362,0,-347.256 0/1:377:128,249:128:4951:249:9475:-738.961,0,-332.115 0/1:293:133,160:133:5063:160:6109:-461.555,0,-367.485 0/1:424:129,295:129:4951:295:11217:-881.49,0,-317.972 0/1:45:34,11:34:1274:11:426:-25.1484,0,-101.401 0/1:166:134,32:134:5153:32:1237:-61.6524,0,-413.802 dDocent_Contig_4781 51 . A T 2007.8 . AB=0.340708;ABP=52.8196;AC=2;AF=0.166667;AN=12;AO=77;CIGAR=1X;DP=743;DPB=743;DPRA=0.874275;EPP=170.214;EPPR=1449.21;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3017;QR=25686;RO=666;RPL=77;RPP=170.214;RPPR=1449.21;RPR=0;RUN=1;SAF=77;SAP=170.214;SAR=0;SRF=666;SRP=1449.21;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:112:112,0:112:4294:0:0:0,-33.7154,-386.493 0/0:163:163,0:163:6307:0:0:0,-49.0679,-567.473 0/0:102:102,0:102:3940:0:0:0,-30.7051,-354.639 0/0:140:140,0:140:5399:0:0:0,-42.1442,-485.823 0/1:87:69,18:69:2666:18:714:-38.3979,0,-213.902 0/1:139:80,59:80:3080:59:2303:-165.604,0,-235.489 dDocent_Contig_4782 98 . N A 179.127 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=6;CIGAR=2X;DP=6;DPB=17;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=8.76405;PAIRED=0;PAIREDR=0;PAO=3;PQA=96;PQR=0;PRO=0;QA=199;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:6:0,6:0:0:6:199:-17.9126,-1.80618,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_4783 17 . A C 105.537 . AB=0.0966667;ABP=426.911;AC=2;AF=0.166667;AN=12;AO=39;CIGAR=1X;DP=981;DPB=981;DPRA=0.927308;EPP=87.6977;EPPR=2046.37;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1541;QR=36887;RO=941;RPL=0;RPP=87.6977;RPPR=2046.37;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=941;SRP=2046.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:97:87,10:87:3417:10:398:-6.97981,0,-278.416 0/0:192:192,0:192:7485:0:0:0,-57.7978,-673.396 0/0:172:162,10:162:6386:10:391:0,-16.2366,-538.986 0/1:203:183,19:183:7166:19:752:-6.79577,0,-583.467 0/0:112:112,0:112:4386:0:0:0,-33.7154,-394.725 0/0:205:205,0:205:8047:0:0:0,-61.7111,-723.882 dDocent_Contig_4784 33 . C T 5778.85 . AB=0.355305;ABP=116.122;AC=4;AF=0.333333;AN=12;AO=221;CIGAR=1X;DP=931;DPB=931;DPRA=1.00647;EPP=482.906;EPPR=1542.58;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.995475;PAIREDR=0.990127;PAO=0;PQA=0;PQR=0;PRO=0;QA=8573;QR=27605;RO=709;RPL=0;RPP=482.906;RPPR=1542.58;RPR=221;RUN=1;SAF=221;SAP=482.906;SAR=0;SRF=709;SRP=1542.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:128:85,43:85:3319:43:1642:-109.483,0,-260.27 0/1:73:50,23:50:1974:23:902:-59.5134,0,-155.891 0/1:135:84,51:84:3260:51:1989:-138.577,0,-252.848 0/1:286:182,104:182:7039:104:4040:-277.533,0,-547.141 0/0:163:163,0:163:6352:0:0:0,-49.0679,-571.481 0/0:146:145,0:145:5661:0:0:0,-43.6493,-508.911 dDocent_Contig_4785 11 . C T 413.528 . AB=0.169014;ABP=138.131;AC=1;AF=0.0833333;AN=12;AO=28;CIGAR=1X;DP=879;DPB=879;DPRA=1.10791;EPP=63.8115;EPPR=1850.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.975323;PAO=0;PQA=0;PQR=0;PRO=0;QA=1109;QR=34092;RO=851;RPL=0;RPP=63.8115;RPPR=1850.93;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=851;SRP=1850.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1324:0:0:0,-9.93399,-119.422 0/0:128:128,0:128:5094:0:0:0,-38.5318,-458.332 0/0:56:54,2:54:2171:2:80:0,-9.26589,-187.972 0/1:142:118,24:118:4757:24:948:-42.8756,0,-385.274 0/0:256:256,0:256:10243:0:0:0,-77.0637,-921.182 0/0:264:262,2:262:10503:2:81:0,-71.7862,-936.874 dDocent_Contig_4786 21 . T C 13612.9 . AB=0.696;ABP=211.559;AC=6;AF=0.5;AN=12;AO=435;CIGAR=1X;DP=625;DPB=625;DPRA=0;EPP=947.601;EPPR=415.59;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.826316;PAO=0;PQA=0;PQR=0;PRO=0;QA=17334;QR=7545;RO=190;RPL=0;RPP=947.601;RPPR=415.59;RPR=435;RUN=1;SAF=435;SAP=947.601;SAR=0;SRF=190;SRP=415.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:75:28,47:28:1109:47:1872:-146.107,0,-77.5179 0/1:66:41,25:41:1632:25:990:-69.5233,0,-127.248 0/1:130:36,94:36:1430:94:3755:-298.826,0,-89.8142 0/1:60:30,30:30:1208:30:1205:-90.6602,0,-90.9332 0/1:117:19,98:19:744:98:3901:-315.867,0,-32.0571 0/1:177:36,141:36:1422:141:5611:-451.524,0,-74.9495 dDocent_Contig_4787 36 . C T 41926 . AB=0.521841;ABP=13.6339;AC=6;AF=0.5;AN=12;AO=1338;CIGAR=1X2M1X2M1X;DP=2564;DPB=2564;DPRA=0;EPP=2908.44;EPPR=1714.13;GTI=0;LEN=1;MEANALT=7;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=52990;QR=30680;RO=788;RPL=0;RPP=2908.44;RPPR=1714.13;RPR=1338;RUN=1;SAF=1338;SAP=2908.44;SAR=0;SRF=788;SRP=1714.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:232:22,0,0,170,10,27:22:852:0,0,170,10,27:0,0,6700,401,1083:-563.819,-570.441,-640.427,-570.441,-640.427,-640.427,-19.2541,-89.2355,-89.2355,-38.0604,-537.402,-607.387,-607.387,-56.1951,-604.377,-481.209,-551.194,-551.194,0,-518.154,-543.066 0|1:235:44,1,0,149,8,31:44:1716:1,0,149,8,31:38,0,5892,295,1256:-471.624,-481.753,-622.5,-484.869,-622.801,-625.917,0,-137.93,-141.046,-96.1925,-460.755,-598.686,-601.802,-116.933,-599.394,-381.297,-519.228,-522.345,-37.4684,-498.23,-513.013 0|1:209:53,0,0,136,5,15:53:2072:0,0,136,5,15:0,0,5376,185,607:-426.434,-442.389,-612.723,-442.389,-612.723,-612.723,0,-170.331,-170.331,-129.391,-427.256,-597.59,-597.59,-155.199,-596.085,-392.339,-562.673,-562.673,-120.28,-547.541,-558.158 0|1:333:14,33,0,256,5,20:14:543:33,0,256,5,20:1280,0,10124,197,795:-889.457,-788.527,-823.203,-893.672,-833.137,-938.281,-60.5351,0,-105.145,-28.0811,-877.465,-816.93,-922.074,-88.9376,-920.569,-828.22,-767.685,-872.83,-39.6903,-856.623,-866.809 0|1:806:264,13,0,365,91,69:264:10267:13,0,365,91,69:517,0,14497,3602,2778:-1113.97,-1150.88,-1990.65,-1193.44,-1994.56,-2037.13,0,-801.118,-843.685,-733.809,-896.995,-1698.12,-1740.68,-547.237,-1713.29,-964.485,-1765.61,-1808.17,-614.727,-1511.72,-1787.4 0|1:749:391,2,49,262,36,3:391:15230:2,49,262,36,3:82,1949,10401,1426,123:-738.517,-849.451,-2100.54,-695.744,-1940.67,-1932.68,0,-1244.92,-1091.21,-1172.82,-738.851,-1983.77,-1830.07,-1134.32,-1979.7,-846.067,-2090.99,-1937.28,-1241.54,-1980.39,-2096.85 dDocent_Contig_4788 83 . G A 4517.48 . AB=0.460048;ABP=8.73605;AC=6;AF=0.5;AN=12;AO=190;CIGAR=1X;DP=413;DPB=413;DPRA=0;EPP=415.59;EPPR=487.249;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.757895;PAIREDR=0.847534;PAO=0;PQA=0;PQR=0;PRO=0;QA=6505;QR=7670;RO=223;RPL=190;RPP=415.59;RPPR=487.249;RPR=0;RUN=1;SAF=190;SAP=415.59;SAR=0;SRF=223;SRP=487.249;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:55:31,24:31:1070:24:832:-58.6423,0,-80.0528 0/1:78:41,37:41:1388:37:1274:-91.4823,0,-101.735 0/1:76:39,37:39:1359:37:1285:-93.0757,0,-99.7335 0/1:62:23,39:23:795:39:1319:-100.343,0,-53.2052 0/1:57:42,15:42:1442:15:510:-29.0651,0,-112.919 0/1:85:47,38:47:1616:38:1285:-90.3618,0,-120.144 dDocent_Contig_4789 68 . C G 4734.37 . AB=0.32483;ABP=159.726;AC=4;AF=0.333333;AN=12;AO=191;CIGAR=1X;DP=765;DPB=765;DPRA=1.66102;EPP=417.762;EPPR=1247.26;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.989529;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7299;QR=22798;RO=573;RPL=191;RPP=417.762;RPPR=1247.26;RPR=0;RUN=1;SAF=191;SAP=417.762;SAR=0;SRF=573;SRP=1247.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:134:83,51:83:3299:51:1909:-131.674,0,-256.632 0/1:99:67,32:67:2680:32:1185:-77.1079,0,-211.522 0/1:132:88,44:88:3536:44:1724:-115.655,0,-278.53 0/1:223:158,64:158:6246:64:2481:-156.222,0,-494.667 0/0:37:37,0:37:1432:0:0:0,-11.1381,-129.127 0/0:140:140,0:140:5605:0:0:0,-42.1442,-504.265 dDocent_Contig_4790 54 . A G 2597.56 . AB=0.276316;ABP=168.156;AC=2;AF=0.166667;AN=12;AO=105;CIGAR=1X;DP=713;DPB=713;DPRA=2.28228;EPP=231.015;EPPR=1323.27;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990132;PAO=0;PQA=0;PQR=0;PRO=0;QA=4189;QR=24211;RO=608;RPL=105;RPP=231.015;RPPR=1323.27;RPR=0;RUN=1;SAF=105;SAP=231.015;SAR=0;SRF=608;SRP=1323.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:65:65,0:65:2608:0:0:0,-19.5669,-234.847 0/0:111:111,0:111:4420:0:0:0,-33.4143,-397.748 0/0:61:61,0:61:2427:0:0:0,-18.3628,-218.581 0/0:96:96,0:96:3844:0:0:0,-28.8989,-345.964 0/1:154:103,51:103:4092:51:2042:-137.612,0,-321.904 0/1:226:172,54:172:6820:54:2147:-125.366,0,-545.472 dDocent_Contig_4791 44 . G A 8595.09 . AB=0.297485;ABP=413.743;AC=2;AF=0.166667;AN=12;AO=343;CIGAR=1X;DP=2127;DPB=2127;DPRA=2.36756;EPP=747.825;EPPR=3876.92;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13448;QR=69679;RO=1784;RPL=0;RPP=747.825;RPPR=3876.92;RPR=343;RUN=1;SAF=343;SAP=747.825;SAR=0;SRF=1784;SRP=3876.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:272:272,0:272:10586:0:0:0,-81.8802,-952.169 0/0:224:224,0:224:8809:0:0:0,-67.4307,-792.369 0/0:131:131,0:131:5179:0:0:0,-39.4349,-465.997 0/0:347:347,0:347:13411:0:0:0,-104.457,-1206.12 0/1:619:406,213:406:15911:213:8348:-564.572,0,-1244.55 0/1:534:404,130:404:15783:130:5100:-298.158,0,-1258.62 dDocent_Contig_4792 22 . C T 313.875 . AB=0.168142;ABP=111.104;AC=3;AF=0.25;AN=12;AO=23;CIGAR=2X;DP=259;DPB=259;DPRA=1.41875;EPP=52.9542;EPPR=511.135;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=910;QR=9278;RO=234;RPL=0;RPP=52.9542;RPPR=511.135;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=234;SRP=511.135;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:36:33,3:33:1316:3:119:-0.258103,0,-107.869 0|1:38:30,8:30:1210:8:314:-17.1807,0,-97.7343 0|0:84:80,3:80:3178:3:117:0,-14.4279,-275.192 0|1:39:31,8:31:1226:8:320:-17.4273,0,-98.8694 0|0:30:29,1:29:1139:1:40:0,-5.03522,-98.7958 0|0:32:31,0:31:1209:0:0:0,-9.33193,-108.97 dDocent_Contig_4793 38 . C T 39.0264 . AB=0.125;ABP=42.0968;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=226;DPB=226;DPRA=1.13208;EPP=18.2106;EPPR=474.22;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.875576;PAO=0;PQA=0;PQR=0;PRO=0;QA=286;QR=8715;RO=217;RPL=0;RPP=18.2106;RPPR=474.22;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=217;SRP=474.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:37,0:37:1485:0:0:0,-11.1381,-133.888 0/0:33:32,0:32:1291:0:0:0,-9.63296,-116.073 0/0:34:33,1:33:1320:1:41:0,-6.14045,-114.966 0/0:54:51,2:51:2042:2:82:0,-8.57778,-176.187 0/0:36:36,0:36:1443:0:0:0,-10.8371,-130.121 0/1:32:28,4:28:1134:4:163:-5.42547,0,-92.7059 dDocent_Contig_4794 75 . T C 4629.82 . AB=0.155148;ABP=2200.1;AC=3;AF=0.25;AN=12;AO=391;CIGAR=1X;DP=3757;DPB=3757;DPRA=0;EPP=852.056;EPPR=7299.16;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99881;PAO=0;PQA=0;PQR=0;PRO=0;QA=14556;QR=121328;RO=3360;RPL=391;RPP=852.056;RPPR=7299.16;RPR=0;RUN=1;SAF=391;SAP=852.056;SAR=0;SRF=3360;SRP=7299.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:517:482,34:482:16893:34:1234:0,-44.3378,-1408.63 0/1:837:736,99:736:25769:99:3574:-70.3328,0,-2066.95 0/1:522:437,83:437:16174:83:3140:-125.984,0,-1298.19 0/1:768:620,148:620:22592:148:5590:-271.886,0,-1801.11 0/0:551:528,22:528:19441:22:825:0,-91.0823,-1674.25 0/0:562:557,5:557:20459:5:193:0,-151.437,-1822.64 dDocent_Contig_4795 98 . N G 2606.99 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=94;CIGAR=1X;DP=97;DPB=97;DPRA=0;EPP=207.129;EPPR=0;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=4.33681e-19;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2876;QR=0;RO=0;RPL=94;RPP=207.129;RPPR=0;RPR=0;RUN=1;SAF=94;SAP=207.129;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:6:0,5:0:0:5:166:-15.1538,-1.50515,0 1/1:2:0,2:0:0:2:33:-3.13483,-0.60206,0 1/1:3:0,2:0:0:2:41:-3.77898,-0.60206,0 1/1:3:0,3:0:0:3:68:-6.3457,-0.90309,0 1/1:42:0,42:0:0:42:1300:-117.281,-12.6433,0 1/1:41:0,40:0:0:40:1268:-114.226,-12.0412,0 dDocent_Contig_4796 21 . G T 232.789 . AB=0.147059;ABP=113.372;AC=1;AF=0.0833333;AN=12;AO=28;CIGAR=1X;DP=657;DPB=657;DPRA=1.72614;EPP=63.8115;EPPR=1368.87;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1139;QR=25208;RO=629;RPL=0;RPP=63.8115;RPPR=1368.87;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=629;SRP=1368.87;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:87:87,0:87:3491:0:0:0,-26.1896,-314.221 0/0:106:106,0:106:4275:0:0:0,-31.9092,-384.692 0/0:186:177,9:177:7096:9:362:0,-23.0485,-605.342 0/0:128:124,4:124:4944:4:164:0,-23.3819,-429.683 0/0:48:48,0:48:1910:0:0:0,-14.4494,-172.091 0/1:102:87,15:87:3492:15:613:-24.8017,0,-283.605 dDocent_Contig_4797 17 . T C 2708.62 . AB=0.252083;ABP=259.262;AC=3;AF=0.25;AN=12;AO=123;CIGAR=1X;DP=912;DPB=912;DPRA=0.898773;EPP=270.101;EPPR=1716.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997465;PAO=0;PQA=0;PQR=0;PRO=0;QA=4747;QR=31081;RO=789;RPL=0;RPP=270.101;RPPR=1716.3;RPR=123;RUN=1;SAF=123;SAP=270.101;SAR=0;SRF=789;SRP=1716.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:106:104,2:104:4081:2:82:0,-24.1295,-359.487 0/0:158:158,0:158:6259:0:0:0,-47.5627,-563.063 0/0:168:168,0:168:6631:0:0:0,-50.573,-596.523 0/1:150:136,14:136:5416:14:530:-2.87462,0,-442.123 0/1:156:102,54:102:3994:54:2082:-140.613,0,-312.51 0/1:174:121,53:121:4700:53:2053:-132.587,0,-370.559 dDocent_Contig_4798 94 . C T 84.6424 . AB=0.12605;ABP=147.55;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=377;DPB=377;DPRA=0.922481;EPP=35.5824;EPPR=789.083;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=520;QR=12439;RO=362;RPL=15;RPP=35.5824;RPPR=789.083;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=362;SRP=789.083;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:54,0:54:1863:0:0:0,-16.2556,-167.953 0/1:87:78,9:78:2686:9:313:-2.31744,0,-215.807 0/1:32:26,6:26:894:6:207:-9.33513,0,-71.1422 0/0:56:56,0:56:1914:0:0:0,-16.8577,-172.538 0/0:91:91,0:91:3115:0:0:0,-27.3937,-280.589 0/0:57:57,0:57:1967:0:0:0,-17.1587,-177.309 dDocent_Contig_4799 39 . T C 213.56 . AB=0.186667;ABP=66.9674;AC=3;AF=0.25;AN=12;AO=15;CIGAR=1X;DP=161;DPB=161;DPRA=1.01887;EPP=35.5824;EPPR=320.045;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.643836;PAO=0;PQA=0;PQR=0;PRO=0;QA=575;QR=5762;RO=146;RPL=0;RPP=35.5824;RPPR=320.045;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=146;SRP=320.045;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:15:13,2:13:521:2:79:-2.98218,0,-42.722 0/0:33:32,1:32:1250:1:41:0,-5.83942,-108.681 0/1:31:27,4:27:1068:4:137:-3.32951,0,-87.0783 0/1:29:21,8:21:845:8:318:-20.2553,0,-67.6323 0/0:30:30,0:30:1164:0:0:0,-9.0309,-105.049 0/0:23:23,0:23:914:0:0:0,-6.92369,-82.569 dDocent_Contig_4800 8 . T C 1849.9 . AB=0.037234;ABP=352.71;AC=0;AF=0;AN=12;AO=7;CIGAR=2X6M1X1M;DP=648;DPB=647.1;DPRA=0;EPP=18.2106;EPPR=873.771;GTI=0;LEN=1;MEANALT=8;MQM=24.5714;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=0;PAIREDR=0.910224;PAO=0;PQA=0;PQR=0;PRO=0;QA=172;QR=15663;RO=401;RPL=0;RPP=18.2106;RPPR=873.771;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=401;SRP=873.771;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:85:24,17,2,24,5,5:24:923:17,2,24,5,5:670,76,844,120,183:-58.4001,-43.3966,-114.072,-59.3899,-112.957,-134.59,0,-53.6044,-69.5912,-68.6007,-57.6872,-111.256,-127.254,-67.8895,-131.982,-50.668,-104.239,-120.239,-60.8703,-118.535,-124.967 0|0:103:53,12,0,33,2,1:53:2067:12,0,33,2,1:471,0,954,52,41:-52.4512,-52.9064,-219.264,-68.4058,-222.877,-238.38,0,-154.543,-170.03,-160.096,-64.8695,-219.342,-234.845,-166.496,-234.242,-65.0185,-219.492,-234.995,-166.645,-231.46,-234.694 0|0:110:74,5,9,19,0,0:74:2891:5,9,19,0,0:200,341,591,0,0:-22.0898,-38.2512,-274.462,-16.3886,-248.016,-251.432,0,-231.614,-209.787,-232.018,-44.3661,-275.967,-254.141,-237.737,-282.093,-44.3661,-275.967,-254.141,-237.737,-282.093,-282.093 0|0:101:68,4,0,24,0,1:68:2669:4,0,24,0,1:158,0,839,0,40:-44.6274,-59.8545,-278.194,-65.0974,-279.398,-284.653,0,-214.348,-219.599,-212.375,-65.0974,-279.398,-284.653,-219.599,-284.653,-61.7999,-276.102,-281.357,-216.304,-281.357,-281.056 0|0:95:72,0,3,15,0,0:72:2803:0,3,15,0,0:0,112,485,0,0:-15.1523,-36.8265,-267.224,-27.6598,-258.063,-257.16,0,-230.358,-221.198,-225.843,-36.8265,-267.224,-258.063,-230.358,-267.224,-36.8265,-267.224,-258.063,-230.358,-267.224,-267.224 0|0:154:110,26,0,12,0,0:110:4310:26,0,12,0,0:1009,0,388,0,0:-3.4891,0,-346.655,-36.6024,-354.482,-391.122,-7.09158,-325.004,-361.64,-358.028,-36.6024,-354.482,-391.122,-361.64,-391.122,-36.6024,-354.482,-391.122,-361.64,-391.122,-391.122 dDocent_Contig_4801 13 . T C 490.622 . AB=0.0989534;ABP=1471.28;AC=3;AF=0.25;AN=12;AO=159;CIGAR=1X;DP=2803;DPB=2803;DPRA=0;EPP=348.274;EPPR=5731.35;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6291;QR=105224;RO=2638;RPL=0;RPP=348.274;RPPR=5731.35;RPR=159;RUN=1;SAF=159;SAP=348.274;SAR=0;SRF=2638;SRP=5731.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:322:291,31:291:11574:31:1217:-12.8636,0,-943.924 0/0:454:446,8:446:17768:8:306:0,-108.774,-1569.77 0/1:310:280,30:280:11136:30:1184:-13.517,0,-908.155 0/0:628:591,37:591:23707:37:1468:0,-56.6829,-1999.15 0/1:419:376,43:376:14943:43:1709:-27.9035,0,-1217.59 0/0:670:654,10:654:26096:10:407:0,-163.3,-2309.32 dDocent_Contig_4803 8 . T C 22070.3 . AB=0.522346;ABP=9.22144;AC=6;AF=0.5;AN=12;AO=748;CIGAR=1X7M;DP=1432;DPB=1441.38;DPRA=0;EPP=1627.27;EPPR=995.373;GTI=0;LEN=1;MEANALT=4.33333;MQM=59.9639;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.874332;PAIREDR=0.980306;PAO=0;PQA=0;PQR=0;PRO=0;QA=28704;QR=17905;RO=457;RPL=0;RPP=1627.27;RPPR=995.373;RPR=748;RUN=1;SAF=748;SAP=1627.27;SAR=0;SRF=457;SRP=995.373;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:233:108,13,24,78:108:4234:13,24,78:513,901,2997:-213.521,-203.82,-548.093,-172.229,-478.202,-513.189,0,-305.978,-274.387,-324.71 0|1:273:78,34,30,128:78:3045:34,30,128:1324,1148,4929:-381.233,-295.896,-535.974,-310.507,-452.003,-551.789,0,-141.497,-156.108,-211.781 0|1:269:74,23,27,138:74:2906:23,27,138:887,1038,5314:-414.049,-363.489,-595.574,-351.109,-517.282,-581.99,0,-166.176,-153.796,-197.47 0|1:306:78,5,35,174:78:3059:5,35,174:195,1346,6615:-518.739,-526.191,-776.254,-431.713,-667.253,-672.745,0,-235.54,-141.065,-199.189 0|1:168:56,0,0,111:56:2202:0,0,111:0,0,4263:-333.082,-349.94,-531.073,-349.94,-531.073,-531.073,0,-181.133,-181.133,-147.719 0|1:183:63,0,0,119:63:2459:0,0,119:0,0,4586:-357.629,-376.594,-578.728,-376.594,-578.728,-578.728,0,-202.153,-202.153,-166.33 dDocent_Contig_4804 17 . A G 31.6793 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=5;CIGAR=3M1X5M;DP=369;DPB=368.222;DPRA=1.09091;EPP=13.8677;EPPR=776.054;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.983146;PAO=0;PQA=0;PQR=0;PRO=0;QA=205;QR=13969;RO=356;RPL=0;RPP=13.8677;RPPR=776.054;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=356;SRP=776.054;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:33:29,4,0:29:1149:4,0:155,0:-4.38948,0,-93.7623,-13.1194,-94.9664,-107.698 0|0:75:74,0,0:74:2902:0,0:0,0:0,-22.2762,-261.119,-22.2762,-261.119,-261.119 0|0:46:43,3,0:43:1670:3,0:118,0:0,-2.84466,-139.543,-12.9443,-140.446,-150.153 0|0:82:82,0,0:82:3221:0,0:0,0:0,-24.6845,-289.996,-24.6845,-289.996,-289.996 0|0:61:61,0,0:61:2396:0,0:0,0:0,-18.3628,-215.812,-18.3628,-215.812,-215.812 0|0:72:67,0,5:67:2631:0,5:0,205:0,-20.169,-236.537,-2.83915,-219.615,-218.11 dDocent_Contig_4805 58 . T A 81.7784 . AB=0.178571;ABP=28.1373;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=309;DPB=309;DPRA=0.79638;EPP=16.0391;EPPR=660.966;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.957096;PAO=0;PQA=0;PQR=0;PRO=0;QA=235;QR=12088;RO=303;RPL=6;RPP=16.0391;RPPR=660.966;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=303;SRP=660.966;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:23,5:23:889:5:194:-9.39969,0,-71.8801 0/0:60:59,1:59:2339:1:41:0,-13.9672,-206.57 0/0:39:39,0:39:1574:0:0:0,-11.7402,-141.892 0/0:46:46,0:46:1850:0:0:0,-13.8474,-166.704 0/0:60:60,0:60:2373:0:0:0,-18.0618,-213.723 0/0:76:76,0:76:3063:0:0:0,-22.8783,-275.739 dDocent_Contig_4806 1 . N G 135.948 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=28.2;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=174;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-2.80279,-0.30103,0 1/1:2:0,2:0:0:2:70:-5.00883,-0.60206,0 1/1:2:0,2:0:0:2:69:-5.30441,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_4807 118 . G A 374.777 . AB=0.333333;ABP=18.2106;AC=3;AF=0.25;AN=12;AO=26;CIGAR=1X;DP=186;DPB=186;DPRA=0.833333;EPP=59.4686;EPPR=350.446;GTI=0;LEN=1;MEANALT=1;MQM=58.7692;MQMR=59.6938;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=819;QR=5415;RO=160;RPL=0;RPP=59.4686;RPPR=350.446;RPR=26;RUN=1;SAF=0;SAP=59.4686;SAR=26;SRF=0;SRP=350.446;SRR=160;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:29,7:29:989:7:238:-10.9134,0,-78.4792 0/0:36:36,0:36:1207:0:0:0,-10.8371,-108.925 0/0:30:29,1:29:959:1:7:0,-8.3309,-85.9112 0/0:57:53,4:53:1809:4:137:0,-4.4918,-150.425 0/1:14:10,4:10:346:4:110:-5.95644,0,-27.2601 0/1:13:3,10:3:105:10:327:-25.8297,0,-5.88277 dDocent_Contig_4808 59 . C T 149.399 . AB=0.128205;ABP=143.488;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1X;DP=306;DPB=306;DPRA=0.873684;EPP=52.9542;EPPR=617.537;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.478261;PAIREDR=0.515901;PAO=0;PQA=0;PQR=0;PRO=0;QA=863;QR=11092;RO=283;RPL=23;RPP=52.9542;RPPR=617.537;RPR=0;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=283;SRP=617.537;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:31,6:31:1208:6:236:-10.4743,0,-97.8612 0/0:31:29,2:29:1139:2:75:0,-2.21183,-95.6735 0/0:38:35,3:35:1349:3:119:0,-0.343745,-110.579 0/0:57:57,0:57:2248:0:0:0,-17.1587,-202.499 0/0:63:60,3:60:2396:3:84:0,-11.1305,-207.963 0/1:80:71,9:71:2752:9:349:-7.68704,0,-223.723 dDocent_Contig_4809 43 . T C 329.408 . AB=0.148387;ABP=169.457;AC=1;AF=0.0833333;AN=12;AO=24;CIGAR=1X;DP=1677;DPB=1677;DPRA=0.92415;EPP=55.1256;EPPR=3592.45;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=938;QR=64633;RO=1653;RPL=0;RPP=55.1256;RPPR=3592.45;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=1653;SRP=3592.45;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:222:222,0:222:8626:0:0:0,-66.8287,-775.986 0/0:357:357,0:357:13932:0:0:0,-107.468,-1253.02 0/0:402:402,0:402:15776:0:0:0,-121.014,-1418.77 0/0:375:374,1:374:14633:1:40:0,-108.891,-1312.06 0/1:155:132,23:132:5131:23:898:-34.4637,0,-415.057 0/0:166:166,0:166:6535:0:0:0,-49.971,-587.932 dDocent_Contig_4810 98 . N C 6958.06 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=229;CIGAR=1X;DP=231;DPB=231;DPRA=0;EPP=500.277;EPPR=0;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=7710;QR=0;RO=0;RPL=229;RPP=500.277;RPPR=0;RPR=0;RUN=1;SAF=229;SAP=500.277;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 1/1:2:0,1:0:0:1:35:-3.2887,-0.30103,0 1/1:1:0,1:0:0:1:26:-2.59983,-0.30103,0 1/1:3:0,2:0:0:2:66:-6.11154,-0.60206,0 1/1:44:0,44:0:0:44:1495:-134.837,-13.2453,0 1/1:180:0,180:0:0:180:6081:-547.411,-54.1854,0 dDocent_Contig_4811 28 . C G 226.763 . AB=0.138211;ABP=142.85;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=359;DPB=359;DPRA=1.11176;EPP=46.4397;EPPR=739.139;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.45;PAIREDR=0.713864;PAO=0;PQA=0;PQR=0;PRO=0;QA=812;QR=13413;RO=339;RPL=0;RPP=46.4397;RPPR=739.139;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=339;SRP=739.139;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1185:0:0:0,-9.0309,-106.928 0/1:67:58,9:58:2297:9:364:-12.9557,0,-186.725 0/1:56:48,8:48:1879:8:327:-12.9424,0,-152.455 0/0:66:63,3:63:2477:3:121:0,-8.58799,-211.79 0/0:48:48,0:48:1894:0:0:0,-14.4494,-170.668 0/0:92:92,0:92:3681:0:0:0,-27.6948,-331.307 dDocent_Contig_4812 13 . A T 223.299 . AB=0.108108;ABP=397.866;AC=4;AF=0.333333;AN=12;AO=32;CIGAR=1X;DP=355;DPB=355;DPRA=2.50847;EPP=72.4974;EPPR=704.396;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.75;PAIREDR=0.73065;PAO=0;PQA=0;PQR=0;PRO=0;QA=1281;QR=12803;RO=323;RPL=0;RPP=72.4974;RPPR=704.396;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=323;SRP=704.396;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:47:42,5:42:1655:5:203:-4.50444,0,-135.028 0/1:77:70,7:70:2779:7:282:-2.57328,0,-227.049 0/1:49:45,4:45:1778:4:161:-0.125015,0,-145.485 0/1:123:107,16:107:4238:16:635:-20.454,0,-344.358 0/0:19:19,0:19:761:0:0:0,-5.71957,-68.8111 0/0:40:40,0:40:1592:0:0:0,-12.0412,-143.518 dDocent_Contig_4813 107 . N G 240.833 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=252;QR=0;RO=0;RPL=0;RPP=22.5536;RPPR=0;RPR=9;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:75:-6.99962,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:152:-13.9807,-1.50515,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:25:-2.49986,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_4814 7 . A G 1775.6 . AB=0.352159;ABP=60.1539;AC=1;AF=0.0833333;AN=12;AO=147;CIGAR=1X2M1I7M1X1M1X2M;DP=421;DPB=431.267;DPRA=0;EPP=322.217;EPPR=411.247;GTI=0;LEN=1;MEANALT=3.83333;MQM=10.8027;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0.994681;PAO=0;PQA=0;PQR=0;PRO=0;QA=1588;QR=7351;RO=188;RPL=0;RPP=322.217;RPPR=411.247;RPR=147;RUN=1;SAF=147;SAP=322.217;SAR=0;SRF=188;SRP=411.247;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:52:28,3,19,0:28:1100:3,19,0:96,209,0:0,-0.670861,-90.411,-0.333331,-83.1857,-85.1903,-8.42884,-91.3141,-90.9098,-99.0469 0|0:45:6,20,19,0:6:233:20,19,0:772,204,0:-61.7416,0,-13.1981,-55.8667,-11.6229,-69.2922,-63.5478,-19.2187,-75.0118,-82.7126 0|0:68:41,1,22,0:41:1612:1,22,0:36,237,0:0,-9.39482,-141.876,-3.29992,-133.141,-129.455,-12.3422,-142.177,-136.078,-145.116 0|0:77:15,13,46,0:15:593:13,46,0:509,506,0:-37.4008,0,-44.9607,-22.145,-29.1039,-57.1278,-41.9162,-48.8741,-70.9751,-90.7653 0|1:37:14,2,19,0:14:548:2,19,0:78,200,0:-3.08784,-0.86479,-45.4394,0,-38.7055,-39.3995,-7.30225,-46.0415,-45.1191,-52.4627 0|0:142:84,2,22,33:84:3265:2,22,33:77,232,1308:-82.5356,-101.496,-369.261,-99.2225,-361.194,-360.893,0,-262.187,-259.855,-258.577 dDocent_Contig_4815 25 . G T 12404.7 . AB=0.797101;ABP=373.325;AC=3;AF=0.25;AN=12;AO=385;CIGAR=1X;DP=536;DPB=536;DPRA=9.11321;EPP=839.027;EPPR=330.903;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=15441;QR=6026;RO=151;RPL=0;RPP=839.027;RPPR=330.903;RPR=385;RUN=1;SAF=385;SAP=839.027;SAR=0;SRF=151;SRP=330.903;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:283:0:0:0,-2.10721,-25.8425 0/0:10:10,0:10:361:0:0:0,-3.0103,-32.8187 0/1:25:23,2:23:930:2:81:-0.159984,0,-76.4768 0/0:36:36,0:36:1444:0:0:0,-10.8371,-130.205 0/1:221:41,180:41:1647:180:7204:-581.474,0,-81.9307 0/1:237:34,203:34:1361:203:8156:-662.22,0,-51.4025 dDocent_Contig_4816 24 . T C 25634.3 . AB=0.0301226;ABP=5478.08;AC=0;AF=0;AN=12;AO=86;CIGAR=1M1X7M;DP=3748;DPB=3733.33;DPRA=0;EPP=189.757;EPPR=5277.52;GTI=0;LEN=1;MEANALT=6.6;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.998765;PAO=0;PQA=0;PQR=0;PRO=0;QA=3437;QR=95924;RO=2429;RPL=0;RPP=189.757;RPPR=5277.52;RPR=86;RUN=1;SAF=86;SAP=189.757;SAR=0;SRF=2429;SRP=5277.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:397:286,0,48,19,43:286:11251:0,48,19,43:0,1905,732,1707:-70.7152,-156.81,-1082.26,0,-925.453,-911.004,-96.7268,-1022.18,-865.369,-1016.46,-16.2955,-941.749,-784.94,-881.664,-928.804 0|0:452:292,76,12,39,30:292:11559:76,12,39,30:2999,473,1571,1215:-158.835,0,-928.444,-207.824,-912.411,-1155.54,-117.254,-821.842,-1029.67,-1056.84,-146.547,-851.136,-1058.96,-968.392,-1088.84 0|0:405:286,50,31,11,24:286:11304:50,31,11,24:1956,1211,445,941:-74.7111,0,-915.152,-61.273,-830.672,-982.144,-124.116,-893.515,-954.787,-1051.01,-83.4306,-852.829,-914.102,-976.945,-1006.41 0|0:801:615,28,24,1,124:615:24328:28,24,1,124:1105,947,41,4907:-218.689,-312.907,-2306.58,-325.908,-2237.09,-2320.78,-400.438,-2311.62,-2324.62,-2402.24,0,-1911.19,-1924.19,-1998.72,-1964.77 0|0:893:607,0,9,0,273:607:23942:0,9,0,273:0,357,0,10954:-719.835,-902.56,-2872.38,-873.173,-2843,-2840.29,-902.56,-2872.38,-2843,-2872.38,0,-1969.86,-1940.47,-1969.86,-1887.68 0|0:800:343,0,0,16,438:343:13540:0,0,16,438:0,0,648,17431:-1331.86,-1435.12,-2549.2,-1435.12,-2549.2,-2549.2,-1381.68,-2495.77,-2495.77,-2490.95,0,-1114.08,-1114.08,-1060.65,-982.227 dDocent_Contig_4817 54 . G A 52.0351 . AB=0.112903;ABP=83.705;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X2M1X;DP=291;DPB=291;DPRA=1.12903;EPP=24.725;EPPR=613.194;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.985765;PAO=0;PQA=0;PQR=0;PRO=0;QA=399;QR=10955;RO=281;RPL=10;RPP=24.725;RPPR=613.194;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=281;SRP=613.194;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:44:44,0:44:1725:0:0:0,-13.2453,-155.485 0|0:39:39,0:39:1529:0:0:0,-11.7402,-137.866 0|0:45:45,0:45:1767:0:0:0,-13.5463,-159.261 0|0:58:58,0:58:2206:0:0:0,-17.4597,-198.746 0|0:43:40,3:40:1568:3:121:0,-1.6643,-130.089 0|1:62:55,7:55:2160:7:278:-6.72637,0,-175.932 dDocent_Contig_4819 8 . T A 2512.29 . AB=0.0270812;ABP=1939.8;AC=6;AF=0.5;AN=12;AO=27;CIGAR=1M1X;DP=1436;DPB=1436;DPRA=0;EPP=61.6401;EPPR=2304.77;GTI=0;LEN=1;MEANALT=3.75;MQM=52.7407;MQMR=56.8557;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0.784906;PAO=0;PQA=0;PQR=0;PRO=0;QA=1029;QR=40471;RO=1060;RPL=0;RPP=61.6401;RPPR=2304.77;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=1060;SRP=2304.77;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:169:116,39,14,0:116:4424:39,14,0:1489,527,0:-61.8422,0,-346.987,-59.9722,-321.947,-414.489,-96.7617,-358.727,-418.704,-455.486 0|1:288:184,57,25,16:184:7040:57,25,16:2180,961,602:-79.7681,0,-555.951,-62.342,-500.306,-627.958,-86.0084,-523.969,-586.342,-654.332 0|1:173:141,26,3,1:141:5385:26,3,1:1004,116,39:-22.5679,0,-428.087,-56.9297,-427.833,-491.972,-61.8172,-432.72,-489.681,-497.461 0|1:245:168,32,35,2:168:6430:32,35,2:1229,1344,78:-40.7909,0,-507.559,-4.6272,-430.444,-511.258,-84.9751,-510.805,-515.406,-601.554 0|1:270:221,34,14,0:221:8388:34,14,0:1306,534,0:-27.5229,0,-663.913,-55.0792,-635.181,-725.003,-94.0505,-674.148,-729.218,-768.185 0|1:291:230,36,17,8:230:8804:36,17,8:1387,634,310:-29.959,0,-700.109,-52.117,-663.868,-757.95,-74.3255,-686.081,-738.201,-782.872 dDocent_Contig_4820 78 . A G 303.5 . AB=0.11976;ABP=422.456;AC=1;AF=0.0833333;AN=12;AO=52;CIGAR=2X;DP=1777;DPB=1777;DPRA=1.31839;EPP=115.927;EPPR=3672.8;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1886;QR=60247;RO=1690;RPL=52;RPP=115.927;RPPR=3672.8;RPR=0;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=1690;SRP=3672.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:225:210,0,15:210:7301:0,15:0,528:0,-63.2163,-656.806,-19.8812,-613.823,-609.307 0|0:425:424,0,0:424:14875:0,0:0,0:0,-127.637,-1338.2,-127.637,-1338.2,-1338.2 0|0:297:295,0,2:295:10660:0,2:0,74:0,-88.8038,-958.868,-82.38,-952.814,-952.212 0|0:372:348,12,12:348:12475:12,12:431,436:0,-69.6041,-1083.38,-69.1499,-1051.39,-1082.93 0|0:124:124,0,0:124:4379:0,0:0,0:0,-37.3277,-394.288,-37.3277,-394.288,-394.288 0|1:334:289,40,4:289:10557:40,4:1455,126:-31.8729,0,-850.609,-108.745,-852.521,-970.154 dDocent_Contig_4822 16 . T C 154296 . AB=0.846235;ABP=5935.02;AC=6;AF=0.5;AN=12;AO=4821;CIGAR=1X;DP=5697;DPB=5697;DPRA=0;EPP=10411;EPPR=1864;GTI=0;LEN=1;MEANALT=1.66667;MQM=59.9979;MQMR=56.0728;NS=6;NUMALT=1;ODDS=0;PAIRED=0.48828;PAIREDR=0.334104;PAO=0;PQA=0;PQR=0;PRO=0;QA=190779;QR=33678;RO=865;RPL=0;RPP=10471.7;RPPR=1881.33;RPR=4821;RUN=1;SAF=4814;SAP=10411;SAR=7;SRF=863;SRP=1864;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:895:130,761:130:5015:761:30028:-2431.48,0,-135.497 0/1:1156:166,987:166:6494:987:39123:-3170.22,0,-212.409 0/1:690:109,581:109:4329:581:23130:-1872.06,0,-165.818 0/1:1233:178,1052:178:6828:1052:41528:-3363.24,0,-228.59 0/1:822:150,671:150:5852:671:26463:-2131.96,0,-265.059 0/1:901:132,769:132:5160:769:30507:-2471.82,0,-183.097 dDocent_Contig_4823 187 . G A 1223.14 . AB=0.588745;ABP=18.8122;AC=2;AF=0.166667;AN=12;AO=137;CIGAR=1X;DP=681;DPB=681;DPRA=1.20388;EPP=300.502;EPPR=1175.62;GTI=0;LEN=1;MEANALT=1;MQM=15.9489;MQMR=43.636;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0;PAIREDR=0.573529;PAO=0;PQA=0;PQR=0;PRO=0;QA=5451;QR=21715;RO=544;RPL=137;RPP=300.502;RPPR=1184.29;RPR=0;RUN=1;SAF=0;SAP=300.502;SAR=137;SRF=1;SRP=1175.62;SRR=543;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:73:73,0:73:2918:0:0:0,-21.9752,-167.172 0/0:141:140,1:140:5621:1:41:0,-40.8466,-409.218 0/0:108:108,0:108:4288:0:0:0,-32.5112,-310.007 0/0:128:128,0:128:5115:0:0:0,-38.5318,-354.64 0/1:116:60,56:60:2399:56:2229:-45.3417,0,-173.294 0/1:115:35,80:35:1374:80:3181:-80.1941,0,-38.6051 dDocent_Contig_4825 107 . N T 61.7453 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=65;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:65:-6.17345,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_4826 63 . C T 87.6826 . AB=0.116279;ABP=112.998;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=549;DPB=549;DPRA=1.0717;EPP=29.068;EPPR=1169.09;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.916667;PAIREDR=0.679702;PAO=0;PQA=0;PQR=0;PRO=0;QA=477;QR=20755;RO=537;RPL=12;RPP=29.068;RPPR=1169.09;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=537;SRP=1169.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:68:68,0:68:2575:0:0:0,-20.47,-231.951 0/0:96:95,1:95:3634:1:39:0,-25.0023,-323.281 0/1:86:76,10:76:2990:10:398:-10.2911,0,-243.314 0/0:102:101,1:101:3913:1:40:0,-26.7094,-348.189 0/0:85:85,0:85:3228:0:0:0,-25.5875,-290.667 0/0:112:112,0:112:4415:0:0:0,-33.7154,-397.316 dDocent_Contig_4827 182 . C T 690.931 . AB=0.254098;ABP=67.0865;AC=3;AF=0.25;AN=12;AO=34;CIGAR=1X;DP=200;DPB=200;DPRA=1.93902;EPP=76.8404;EPPR=363.475;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.852941;PAIREDR=0.873494;PAO=0;PQA=0;PQR=0;PRO=0;QA=1339;QR=6638;RO=166;RPL=34;RPP=76.8404;RPPR=363.475;RPR=0;RUN=1;SAF=0;SAP=76.8404;SAR=34;SRF=0;SRP=363.475;SRR=166;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:20,16:20:801:16:633:-46.4654,0,-61.5672 0/1:38:31,7:31:1239:7:277:-13.8595,0,-100.341 0/0:15:15,0:15:587:0:0:0,-4.51545,-53.162 0/1:48:40,8:40:1612:8:312:-13.9896,0,-130.859 0/0:26:26,0:26:1041:0:0:0,-7.82678,-93.9754 0/0:37:34,3:34:1358:3:117:0,-0.228413,-111.568 dDocent_Contig_4828 30 . T C 18555.7 . AB=0.408328;ABP=120.457;AC=6;AF=0.5;AN=12;AO=657;CIGAR=1X;DP=1609;DPB=1609;DPRA=0;EPP=1429.67;EPPR=2070.25;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=26127;QR=37815;RO=952;RPL=0;RPP=1429.67;RPPR=2070.25;RPR=657;RUN=1;SAF=657;SAP=1429.67;SAR=0;SRF=952;SRP=2070.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:140:17,123:17:692:123:4904:-399.114,0,-20.4637 0/1:247:94,153:94:3731:153:6065:-471.275,0,-261.44 0/1:229:117,112:117:4599:112:4442:-330.781,0,-344.9 0/1:335:191,144:191:7610:144:5737:-415.298,0,-583.659 0/1:237:207,30:207:8241:30:1190:-36.0295,0,-669.895 0/1:421:326,95:326:12942:95:3789:-214.296,0,-1037.11 dDocent_Contig_4829 23 . T C 38314.5 . AB=0.412944;ABP=219.649;AC=6;AF=0.5;AN=12;AO=1359;CIGAR=1X;DP=3291;DPB=3291;DPRA=0;EPP=2954.04;EPPR=4141.84;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999264;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=53659;QR=69764;RO=1906;RPL=0;RPP=2954.04;RPPR=4141.84;RPR=1359;RUN=1;SAF=1359;SAP=2954.04;SAR=0;SRF=1906;SRP=4141.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:486:311,174:311:11213:174:6907:-475.225,0,-862.788 0/1:486:269,217:269:9724:217:8499:-618.146,0,-728.645 0/1:432:268,164:268:9890:164:6479:-452.812,0,-759.778 0/1:655:416,237:416:15204:237:9356:-644.727,0,-1171.06 0/1:629:286,321:286:10572:321:12742:-962.792,0,-768.067 0/1:603:356,246:356:13161:246:9676:-688.968,0,-1002.71 dDocent_Contig_4830 24 . T C 149.128 . AB=0.117188;ABP=165.939;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1X;DP=797;DPB=797;DPRA=0.806338;EPP=44.2683;EPPR=1690.24;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.979408;PAO=0;PQA=0;PQR=0;PRO=0;QA=754;QR=31240;RO=777;RPL=0;RPP=44.2683;RPPR=1690.24;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=777;SRP=1690.24;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:105:105,0:105:4218:0:0:0,-31.6081,-379.566 0/1:128:113,15:113:4517:15:607:-16.4357,0,-367.917 0/0:73:73,0:73:2931:0:0:0,-21.9752,-263.873 0/0:101:97,4:97:3889:4:147:0,-16.8217,-336.409 0/0:231:230,0:230:9269:0:0:0,-69.2369,-833.398 0/0:159:159,0:159:6416:0:0:0,-47.8638,-577.146 dDocent_Contig_4831 47 . G A 169.322 . AB=0.236842;ABP=25.8679;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=289;DPB=289;DPRA=0.890566;EPP=31.2394;EPPR=602.337;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.153846;PAIREDR=0.452899;PAO=0;PQA=0;PQR=0;PRO=0;QA=470;QR=10333;RO=276;RPL=0;RPP=31.2394;RPPR=602.337;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=276;SRP=602.337;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:29,9:29:1077:9:325:-18.1541,0,-85.7866 0/0:55:54,1:54:2055:1:39:0,-12.6601,-181.286 0/0:39:38,1:38:1399:1:30:0,-8.7406,-123.174 0/0:52:51,1:51:1933:1:39:0,-11.757,-170.317 0/0:53:53,0:53:2002:0:0:0,-15.9546,-180.414 0/0:52:51,1:51:1867:1:37:0,-11.9557,-164.568 dDocent_Contig_4832 32 . G A 994.568 . AB=0.209016;ABP=182.459;AC=5;AF=0.416667;AN=12;AO=54;CIGAR=1X;DP=321;DPB=321;DPRA=0;EPP=120.27;EPPR=582.793;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.833333;PAIREDR=0.835206;PAO=0;PQA=0;PQR=0;PRO=0;QA=2112;QR=10595;RO=267;RPL=0;RPP=120.27;RPPR=582.793;RPR=54;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=267;SRP=582.793;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:43:39,4:39:1532:4:163:-2.11414,0,-125.172 0/1:45:32,13:32:1290:13:515:-33.1505,0,-102.817 0/1:65:48,17:48:1907:17:653:-39.5247,0,-152.254 0/1:59:45,14:45:1792:14:547:-31.8094,0,-143.734 0/1:32:29,3:29:1165:3:121:-1.64724,0,-95.4961 0/0:77:74,3:74:2909:3:113:0,-12.6415,-251.385 dDocent_Contig_4833 9 . C A 54051.1 . AB=0.382056;ABP=482.45;AC=6;AF=0.5;AN=12;AO=1516;CIGAR=1X1M;DP=3968;DPB=3968;DPRA=0;EPP=3294.96;EPPR=2999.64;GTI=0;LEN=1;MEANALT=2.5;MQM=59.9881;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.997101;PAO=0;PQA=0;PQR=0;PRO=0;QA=58106;QR=53972;RO=1380;RPL=0;RPP=3294.96;RPPR=2999.64;RPR=1516;RUN=1;SAF=1516;SAP=3294.96;SAR=0;SRF=1380;SRP=2999.64;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:550:198,125,227:198:7708:125,227:4876,8699:-654.328,-313.127,-908.968,0,-232.664,-565.133 0|1:745:235,72,438:235:9207:72,438:2809,16796:-1307.82,-1147.66,-1883.08,0,-526.189,-625.24 0|1:571:167,125,279:167:6541:125,279:4841,10728:-830.462,-483.064,-983.29,0,-140.187,-453.868 0|1:627:219,127,279:219:8607:127,279:4974,10690:-811.406,-468.321,-1138.04,0,-298.939,-623.959 0|1:717:264,295,158:264:10315:295,158:11503,6052:-866.036,0,-759.185,-448.829,-351.311,-1249.25 0|1:758:297,325,135:297:11594:325,135:12606,5141:-946.277,0,-855.234,-614.002,-531.39,-1526.43 dDocent_Contig_4834 20 . G A 3389.84 . AB=0.166811;ABP=1112.87;AC=3;AF=0.25;AN=12;AO=254;CIGAR=1X;DP=2653;DPB=2653;DPRA=0;EPP=554.564;EPPR=5210.2;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0.992126;PAIREDR=0.989992;PAO=0;PQA=0;PQR=0;PRO=0;QA=10163;QR=95041;RO=2398;RPL=0;RPP=554.564;RPPR=5210.2;RPR=254;RUN=1;SAF=254;SAP=554.564;SAR=0;SRF=2398;SRP=5210.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:347:287,60:287:11424:60:2391:-110.88,0,-922.936 0/0:330:303,26:303:12044:26:1058:0,-3.80848,-987.609 0/1:377:317,60:317:12580:60:2407:-103.283,0,-1017.8 0/1:427:355,72:355:14073:72:2872:-130.043,0,-1137 0/0:596:584,12:584:23056:12:472:0,-136.589,-2030.3 0/0:576:552,24:552:21864:24:963:0,-86.4261,-1878.93 dDocent_Contig_4835 183 . G A 2129.16 . AB=0.212766;ABP=339.82;AC=4;AF=0.333333;AN=12;AO=100;CIGAR=1X;DP=497;DPB=497;DPRA=8.7037;EPP=220.158;EPPR=865.085;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.989924;PAO=0;PQA=0;PQR=0;PRO=0;QA=4005;QR=15745;RO=397;RPL=100;RPP=220.158;RPPR=865.085;RPR=0;RUN=1;SAF=0;SAP=220.158;SAR=100;SRF=0;SRP=865.085;SRR=397;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:108:98,10:98:3902:10:402:-4.02826,0,-318.653 0/1:163:131,32:131:5160:32:1301:-68.2794,0,-415.205 0/1:69:53,16:53:2115:16:630:-36.2612,0,-169.764 0/1:130:88,42:88:3507:42:1672:-111.569,0,-276.527 0/0:17:17,0:17:661:0:0:0,-5.11751,-59.8124 0/0:10:10,0:10:400:0:0:0,-3.0103,-36.3577 dDocent_Contig_4836 31 . T G 40935.5 . AB=0.558595;ABP=76.045;AC=6;AF=0.5;AN=12;AO=1368;CIGAR=1X;DP=2449;DPB=2449;DPRA=0;EPP=2973.58;EPPR=2350.37;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0.991228;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=53833;QR=42668;RO=1081;RPL=0;RPP=2973.58;RPPR=2350.37;RPR=1368;RUN=1;SAF=1368;SAP=2973.58;SAR=0;SRF=1081;SRP=2350.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:473:226,247:226:8889:247:9693:-729.422,0,-657.131 0/1:523:265,258:265:10414:258:10147:-755.18,0,-779.185 0/1:224:115,109:115:4528:109:4334:-322.577,0,-340.037 0/1:460:320,140:320:12721:140:5528:-358.894,0,-1005.52 0/1:481:118,363:118:4680:363:14255:-1137.14,0,-276.329 0/1:288:37,251:37:1436:251:9876:-801.558,0,-42.793 dDocent_Contig_4837 98 . N C 158.471 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=157;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:11:-1.09999,-0.30103,0 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 1/1:2:0,2:0:0:2:42:-3.9887,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_4838 32 . A G 608.113 . AB=0.231405;ABP=78.8324;AC=4;AF=0.333333;AN=12;AO=29;CIGAR=1X;DP=190;DPB=190;DPRA=0.774359;EPP=65.983;EPPR=350.446;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.862069;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1165;QR=6438;RO=160;RPL=0;RPP=65.983;RPPR=350.446;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=160;SRP=350.446;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:36,5:36:1448:5:199:-5.94613,0,-118.223 0/0:30:29,1:29:1160:1:41:0,-4.93633,-100.585 0/1:24:22,2:22:890:2:80:-0.367071,0,-73.1813 0/0:39:39,0:39:1561:0:0:0,-11.7402,-140.727 0/1:25:15,9:15:608:9:356:-25.056,0,-47.7237 0/1:31:19,12:19:771:12:489:-35.0294,0,-60.3783 dDocent_Contig_4839 14 . A T 1558.74 . AB=0.119029;ABP=1612.87;AC=3;AF=0.25;AN=12;AO=182;CIGAR=1X;DP=3100;DPB=3100;DPRA=0.721248;EPP=398.218;EPPR=6339.37;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7235;QR=116746;RO=2918;RPL=0;RPP=398.218;RPPR=6339.37;RPR=182;RUN=1;SAF=182;SAP=398.218;SAR=0;SRF=2918;SRP=6339.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:328:287,41:287:11453:41:1650:-49.9889,0,-931.248 0/0:611:582,29:582:23312:29:1161:0,-79.164,-1991.25 0/1:362:327,35:327:13099:35:1411:-18.2684,0,-1068.94 0/1:587:511,76:511:20475:76:2994:-92.8387,0,-1664.3 0/0:673:673,0:673:26912:0:0:0,-202.593,-2419.64 0/0:539:538,1:538:21495:1:19:0,-160.355,-1930.78 dDocent_Contig_4840 51 . A T 49.695 . AB=0.105263;ABP=131.584;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=306;DPB=306;DPRA=1.04898;EPP=33.4109;EPPR=637.08;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.732877;PAO=0;PQA=0;PQR=0;PRO=0;QA=561;QR=9914;RO=292;RPL=14;RPP=33.4109;RPPR=637.08;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=292;SRP=637.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:40:36,4:36:1275:4:155:-2.28227,0,-103 0/0:59:57,2:57:1896:2:79:0,-10.2631,-163.398 0/0:38:37,1:37:1294:1:41:0,-7.34457,-112.647 0/0:49:49,0:49:1646:0:0:0,-14.7505,-148.408 0/1:55:49,6:49:1663:6:245:-5.87282,0,-133.369 0/0:65:64,1:64:2140:1:41:0,-15.4724,-188.754 dDocent_Contig_4841 184 . T G 142.213 . AB=0.272727;ABP=12.8806;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=208;DPB=208;DPRA=1.4958;EPP=20.3821;EPPR=437.305;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.95;PAO=0;PQA=0;PQR=0;PRO=0;QA=323;QR=7919;RO=200;RPL=8;RPP=20.3821;RPPR=437.305;RPR=0;RUN=1;SAF=0;SAP=20.3821;SAR=8;SRF=0;SRP=437.305;SRR=200;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:16,6:16:602:6:241:-15.4431,0,-47.8706 0/0:10:10,0:10:396:0:0:0,-3.0103,-35.9957 0/0:19:19,0:19:772:0:0:0,-5.71957,-69.7988 0/0:25:25,0:25:1004:0:0:0,-7.52575,-90.6569 0/0:65:65,0:65:2568:0:0:0,-19.5669,-231.245 0/0:67:65,2:65:2577:2:82:0,-12.3893,-224.274 dDocent_Contig_4842 17 . C T 279.446 . AB=0.124567;ABP=356.825;AC=2;AF=0.166667;AN=12;AO=37;CIGAR=1X;DP=693;DPB=693;DPRA=1.44014;EPP=83.3548;EPPR=1425.32;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99084;PAO=0;PQA=0;PQR=0;PRO=0;QA=1345;QR=25977;RO=655;RPL=0;RPP=83.3548;RPPR=1425.32;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=655;SRP=1425.32;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:89:89,0:89:3532:0:0:0,-26.7917,-317.92 0/0:120:119,1:119:4672:1:39:0,-32.227,-416.504 0/0:106:106,0:106:4238:0:0:0,-31.9092,-381.37 0/0:89:89,0:89:3532:0:0:0,-26.7917,-317.905 0/1:220:190,29:190:7532:29:1045:-28.0865,0,-611.247 0/1:69:62,7:62:2471:7:261:-3.07383,0,-201.762 dDocent_Contig_4843 32 . A T 4576.49 . AB=0.204331;ABP=809.408;AC=1;AF=0.0833333;AN=12;AO=244;CIGAR=1X;DP=5978;DPB=5978;DPRA=1.32203;EPP=532.85;EPPR=12445.5;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9745;QR=229041;RO=5730;RPL=0;RPP=532.85;RPPR=12445.5;RPR=244;RUN=1;SAF=244;SAP=532.85;SAR=0;SRF=5730;SRP=12445.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:872:871,0:871:34758:0:0:0,-262.197,-3124.93 0/0:1045:1045,0:1045:41768:0:0:0,-314.576,-3755.13 0/0:625:624,0:624:24942:0:0:0,-187.843,-2242.17 0/0:1057:1057,0:1057:42239:0:0:0,-318.189,-3797.5 0/1:1062:844,217:844:33672:217:8661:-459.172,0,-2707.56 0/0:1317:1289,27:1289:51662:27:1084:0,-298.42,-4546.67 dDocent_Contig_4844 61 . C T 580.276 . AB=0.131519;ABP=523.105;AC=2;AF=0.166667;AN=12;AO=61;CIGAR=1X;DP=911;DPB=911;DPRA=1.58945;EPP=135.47;EPPR=1848.76;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=56.2188;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.884706;PAO=0;PQA=0;PQR=0;PRO=0;QA=2258;QR=31984;RO=850;RPL=61;RPP=135.47;RPPR=1848.76;RPR=0;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=850;SRP=1848.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:161:160,1:160:5805:1:37:0,-44.768,-495.075 0/0:91:89,2:89:3268:2:72:0,-20.5571,-273.941 0/0:118:118,0:118:4441:0:0:0,-35.5215,-394.334 0/0:100:100,0:100:3836:0:0:0,-30.103,-341.776 0/1:189:157,32:157:5958:32:1176:-49.2375,0,-455.432 0/1:252:226,26:226:8676:26:973:-12.012,0,-680.295 dDocent_Contig_4845 24 . G A 521.611 . AB=0.229358;ABP=72.358;AC=3;AF=0.25;AN=12;AO=26;CIGAR=1X;DP=242;DPB=242;DPRA=0.674757;EPP=59.4686;EPPR=472.048;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.615385;PAIREDR=0.560185;PAO=0;PQA=0;PQR=0;PRO=0;QA=1012;QR=8598;RO=216;RPL=0;RPP=59.4686;RPPR=472.048;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=216;SRP=472.048;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:25,11:25:1004:11:418:-27.122,0,-79.819 0/0:30:29,1:29:1140:1:40:0,-5.03522,-98.8864 0/1:24:22,2:22:892:2:80:-0.367071,0,-73.3615 0/1:49:37,12:37:1459:12:474:-28.2593,0,-116.803 0/0:42:42,0:42:1670:0:0:0,-12.6433,-150.528 0/0:61:61,0:61:2433:0:0:0,-18.3628,-219.106 dDocent_Contig_4846 1 . N G 74.9833 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=79;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:79:-7.49724,-0.60206,0 dDocent_Contig_4847 22 . G C 10844.5 . AB=0.0561185;ABP=2198.72;AC=0;AF=0;AN=12;AO=72;CIGAR=2X2M1I3M;DP=1283;DPB=1298.57;DPRA=0;EPP=159.356;EPPR=1614.24;GTI=0;LEN=1;MEANALT=5.33333;MQM=59.9444;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.997305;PAO=0;PQA=0;PQR=0;PRO=0;QA=2822;QR=28658;RO=742;RPL=0;RPP=159.356;RPPR=1614.24;RPR=72;RUN=1;SAF=72;SAP=159.356;SAR=0;SRF=742;SRP=1614.24;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:164:114,6,42:114:4378:6,42:234,1638:-100.334,-115.417,-472.97,0,-340.151,-346.742 0|0:229:164,13,42:164:6326:13,42:513,1669:-88.0422,-95.1999,-610.758,0,-477.272,-506.839 0|0:158:110,12,34:110:4229:12,34:483,1333:-76.4871,-69.7901,-413.325,0,-307.328,-336.903 0|0:229:164,15,40:164:6370:15,40:593,1530:-76.1449,-76.7106,-595.608,0,-474.608,-511.368 0|0:243:69,13,141:69:2696:13,141:509,5539:-434.755,-413.677,-631.408,0,-179.796,-179.199 0|0:260:121,13,111:121:4659:13,111:490,4335:-319.903,-316.186,-694.783,0,-342.374,-349.102 dDocent_Contig_4848 46 . A T 1614.15 . AB=0.367816;ABP=29.4174;AC=3;AF=0.25;AN=12;AO=78;CIGAR=1X;DP=386;DPB=386;DPRA=0;EPP=172.385;EPPR=671.824;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9805;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.602564;PAIREDR=0.529221;PAO=0;PQA=0;PQR=0;PRO=0;QA=2944;QR=11766;RO=308;RPL=0;RPP=172.385;RPPR=671.824;RPR=78;RUN=1;SAF=78;SAP=172.385;SAR=0;SRF=308;SRP=671.824;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:53:46,7:46:1684:7:270:-8.71037,0,-135.844 0/0:81:77,4:77:2981:4:155:0,-10.0582,-254.096 0/0:63:58,5:58:2181:5:192:0,-1.31633,-178.844 0/0:68:63,5:63:2436:5:174:0,-4.47229,-203.427 0/1:66:35,31:35:1368:31:1173:-85.9866,0,-103.521 0/1:55:29,26:29:1116:26:980:-71.9393,0,-84.1795 dDocent_Contig_4849 98 . N G 1910.86 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=66;CIGAR=1X;DP=67;DPB=67;DPRA=0;EPP=146.327;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2097;QR=0;RO=0;RPL=66;RPP=146.327;RPPR=0;RPR=0;RUN=1;SAF=66;SAP=146.327;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:29:0,29:0:0:29:921:-83.1842,-8.72987,0 1/1:3:0,3:0:0:3:99:-9.2374,-0.90309,0 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 1/1:3:0,3:0:0:3:101:-9.42377,-0.90309,0 1/1:1:0,1:0:0:1:5:-0.499999,-0.30103,0 1/1:30:0,29:0:0:29:938:-84.6398,-8.72987,0 dDocent_Contig_4850 54 . T C 73.3792 . AB=0.105691;ABP=169.119;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=370;DPB=370;DPRA=0.995951;EPP=31.2394;EPPR=778.226;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.966387;PAO=0;PQA=0;PQR=0;PRO=0;QA=519;QR=14132;RO=357;RPL=13;RPP=31.2394;RPPR=778.226;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=357;SRP=778.226;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:54,0:54:2110:0:0:0,-16.2556,-190.091 0/0:67:67,0:67:2653:0:0:0,-20.169,-238.908 0/0:45:45,0:45:1794:0:0:0,-13.5463,-161.682 0/0:81:81,0:81:3218:0:0:0,-24.3834,-289.7 0/1:55:48,7:48:1923:7:278:-8.83313,0,-156.717 0/1:68:62,6:62:2434:6:241:-1.59626,0,-198.742 dDocent_Contig_4851 160 . G A 1184.69 . AB=0.372093;ABP=21.3416;AC=4;AF=0.333333;AN=12;AO=50;CIGAR=1X;DP=324;DPB=324;DPRA=0;EPP=111.584;EPPR=547.02;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1892;QR=10793;RO=274;RPL=50;RPP=111.584;RPPR=547.02;RPR=0;RUN=1;SAF=0;SAP=111.584;SAR=50;SRF=0;SRP=597.994;SRR=274;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:28,6:28:1101:6:224:-10.2803,0,-89.1437 0/1:48:33,15:33:1292:15:562:-36.4525,0,-102.106 0/1:24:14,10:14:547:10:400:-29.1354,0,-42.3474 0/1:23:6,17:6:245:17:627:-49.8222,0,-15.5058 0/0:88:87,1:87:3423:1:39:0,-22.5941,-304.233 0/0:107:106,1:106:4185:1:40:0,-28.2145,-372.625 dDocent_Contig_4852 98 . N T 936.169 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=30;CIGAR=1X;DP=30;DPB=30;DPRA=0;EPP=68.1545;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1010;QR=0;RO=0;RPL=30;RPP=68.1545;RPPR=0;RPR=0;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:7:0,7:0:0:7:244:-22.3001,-2.10721,0 1/1:3:0,3:0:0:3:105:-9.79616,-0.90309,0 1/1:3:0,3:0:0:3:79:-7.37189,-0.90309,0 1/1:14:0,14:0:0:14:481:-43.6179,-4.21442,0 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 dDocent_Contig_4853 1 . N G 98.8964 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=106;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:106:-9.8891,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_4854 8 . T A 8065.42 . AB=0.265708;ABP=632.854;AC=2;AF=0.166667;AN=12;AO=352;CIGAR=1X;DP=3566;DPB=3566;DPRA=1.01242;EPP=767.369;EPPR=6982.12;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997159;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13457;QR=123481;RO=3214;RPL=0;RPP=767.369;RPPR=6982.12;RPR=352;RUN=1;SAF=352;SAP=767.369;SAR=0;SRF=3214;SRP=6982.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:510:510,0:510:19565:0:0:0,-153.525,-1759.8 0/0:632:632,0:632:24332:0:0:0,-190.251,-2188.46 0/0:473:472,1:472:18139:1:39:0,-138.491,-1627.65 0/0:630:630,0:630:24193:0:0:0,-189.649,-2175.98 0/1:625:469,156:469:17989:156:5961:-348.298,0,-1429.93 0/1:696:501,195:501:19263:195:7457:-461.466,0,-1523.11 dDocent_Contig_4857 90 . A G 39.6258 . AB=0.0588235;ABP=31.7504;AC=0;AF=0;AN=12;AO=5;CIGAR=1X1M;DP=215;DPB=236;DPRA=1.08738;EPP=13.8677;EPPR=441.648;GTI=0;LEN=1;MEANALT=2.33333;MQM=22;MQMR=54.3564;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.732673;PAO=0;PQA=0;PQR=0;PRO=0;QA=110;QR=7025;RO=202;RPL=5;RPP=13.8677;RPPR=3.0533;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=100;SRP=3.0533;SRR=102;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:25:25,0,0:25:835:0,0:0,0:0,-7.52575,-69.3027,-7.52575,-69.3027,-69.3027 0|0:67:64,1,1:64:2247:1,1:41,22:0,-16.1145,-190.357,-17.9183,-189.251,-192.068 0|0:28:26,2,0:26:913:2,0:79,0:0,-1.36683,-69.4612,-7.82678,-70.0633,-76.1549 0|0:50:50,0,0:50:1739:0,0:0,0:0,-15.0515,-154.079,-15.0515,-154.079,-154.079 0|0:28:24,1,3:24:830:1,3:40,66:0,-4.1081,-50.2397,-3.13532,-46.3194,-48.4918 0|0:17:13,3,1:13:461:3,1:121,22:-5.48537,0,-31.0044,-8.03607,-30.5064,-39.4777 dDocent_Contig_4858 28 . A T 6155.18 . AB=0.30198;ABP=278.207;AC=4;AF=0.333333;AN=12;AO=245;CIGAR=1X;DP=1338;DPB=1338;DPRA=1.07429;EPP=535.021;EPPR=2374.26;GTI=0;LEN=1;MEANALT=1;MQM=52.1265;MQMR=59.5476;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.989927;PAO=0;PQA=0;PQR=0;PRO=0;QA=9721;QR=43097;RO=1092;RPL=0;RPP=535.021;RPPR=2374.26;RPR=245;RUN=1;SAF=245;SAP=535.021;SAR=0;SRF=1092;SRP=2374.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:181:132,49:132:5201:49:1929:-118.277,0,-412.559 0/1:184:112,72:112:4420:72:2863:-200.477,0,-342.356 0/1:237:169,68:169:6628:68:2718:-171.59,0,-524.689 0/1:206:151,55:151:5936:55:2170:-132.397,0,-471.756 0/0:210:209,0:209:8296:0:0:0,-62.9153,-746.038 0/0:320:319,1:319:12616:1:41:0,-92.271,-1130.46 dDocent_Contig_4859 23 . T A 8787.88 . AB=0.234196;ABP=1022.32;AC=6;AF=0.5;AN=12;AO=389;CIGAR=1X;DP=1661;DPB=1661;DPRA=0;EPP=847.713;EPPR=2765.12;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=15436;QR=50833;RO=1272;RPL=0;RPP=847.713;RPPR=2765.12;RPR=389;RUN=1;SAF=389;SAP=847.713;SAR=0;SRF=1272;SRP=2765.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:160:116,44:116:4656:44:1761:-110.542,0,-370.787 0/1:270:170,100:170:6804:100:3961:-275.188,0,-530.761 0/1:295:208,87:208:8329:87:3458:-222.461,0,-660.321 0/1:326:262,64:262:10512:64:2540:-130.592,0,-847.222 0/1:299:251,48:251:10007:48:1895:-80.745,0,-809.987 0/1:311:265,46:265:10525:46:1821:-70.4814,0,-852.941 dDocent_Contig_4860 158 . C A 207.756 . AB=0.184932;ABP=128.896;AC=2;AF=0.166667;AN=12;AO=27;CIGAR=1X;DP=240;DPB=240;DPRA=3.10638;EPP=61.6401;EPPR=423.124;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995305;PAO=0;PQA=0;PQR=0;PRO=0;QA=749;QR=5635;RO=213;RPL=27;RPP=61.6401;RPPR=431.443;RPR=0;RUN=1;SAF=0;SAP=61.6401;SAR=27;SRF=1;SRP=456.889;SRR=212;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:597:0:0:0,-7.52575,-53.9627 0/0:27:27,0:27:764:0:0:0,-8.12781,-69.0296 0/0:10:10,0:10:280:0:0:0,-3.0103,-25.4722 0/0:32:32,0:32:844:0:0:0,-9.63296,-76.2141 0/1:88:75,13:75:1962:13:341:-4.45271,0,-150.326 0/1:58:44,14:44:1188:14:408:-19.5445,0,-89.7129 dDocent_Contig_4861 125 . G A 527.035 . AB=0.0545455;ABP=97.8049;AC=0;AF=0;AN=12;AO=3;CIGAR=2X;DP=185;DPB=185;DPRA=0.366667;EPP=9.52472;EPPR=330.903;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=106;QR=5187;RO=151;RPL=0;RPP=9.52472;RPPR=330.903;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=330.903;SRR=151;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:14:8,0,6:8:274:0,6:0,200:-14.1124,-16.5206,-38.7691,0,-22.5856,-20.7794 0|0:14:8,0,6:8:280:0,6:0,211:-15.119,-17.5273,-40.3082,0,-23.1318,-21.3256 0|0:27:19,2,6:19:657:2,6:72,213:-11.6321,-11.4756,-64.2554,0,-47.4999,-51.5699 0|0:28:19,1,8:19:663:1,8:34,276:-16.7072,-19.6693,-73.2986,0,-51.1784,-51.5277 0|0:75:74,0,1:74:2529:0,1:0,34:0,-22.2762,-227.528,-19.1783,-224.77,-224.469 0|0:27:23,0,4:23:784:0,4:0,135:-4.35433,-11.278,-74.8926,0,-63.9524,-62.7483 dDocent_Contig_4862 187 . A G 8207.45 . AB=0.480207;ABP=4.98742;AC=6;AF=0.5;AN=12;AO=279;CIGAR=1X;DP=581;DPB=581;DPRA=0;EPP=608.851;EPPR=658.795;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.976821;PAO=0;PQA=0;PQR=0;PRO=0;QA=11174;QR=12042;RO=302;RPL=279;RPP=608.851;RPPR=658.795;RPR=0;RUN=1;SAF=0;SAP=608.851;SAR=279;SRF=0;SRP=658.795;SRR=302;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:48:22,26:22:888:26:1016:-77.2749,0,-65.7754 0/1:50:23,27:23:914:27:1076:-82.0758,0,-67.5136 0/1:27:15,12:15:600:12:484:-35.7833,0,-46.2067 0/1:117:60,57:60:2399:57:2297:-171.667,0,-180.835 0/1:156:85,71:85:3394:71:2817:-206.675,0,-258.55 0/1:183:97,86:97:3847:86:3484:-258.491,0,-291.142 dDocent_Contig_4863 50 . T A 32099.8 . AB=0.530673;ABP=19.3954;AC=6;AF=0.5;AN=12;AO=1064;CIGAR=10M1X1M;DP=2005;DPB=2034.75;DPRA=0;EPP=2304.78;EPPR=1718.47;GTI=0;LEN=1;MEANALT=8;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=42036;QR=30983;RO=790;RPL=1;RPP=2304.78;RPPR=1718.47;RPR=1063;RUN=1;SAF=1064;SAP=2313.46;SAR=0;SRF=790;SRP=1718.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:326:158,6,146:158:6170:6,146:210,5783:-428.433,-458.91,-964.299,0,-490.154,-463.289 0|1:336:101,20,189:101:4000:20,189:653,7446:-582.167,-559.847,-883.055,0,-276.554,-272.381 0|1:229:75,5,141:75:2959:5,141:138,5566:-435.404,-447.073,-689.031,0,-232.604,-201.063 0|1:489:168,0,293:168:6578:0,293:0,11640:-907.682,-958.255,-1499.12,0,-540.89,-452.688 0|1:271:106,1,146:106:4127:1,146:33,5756:-441.629,-470.87,-809.725,0,-336.507,-295.224 0|1:354:182,0,149:182:7149:0,149:0,5845:-425.89,-480.677,-1068.67,0,-588.03,-543.177 dDocent_Contig_4864 79 . C G 387.11 . AB=0.12204;ABP=684.216;AC=1;AF=0.0833333;AN=12;AO=231;CIGAR=1X;DP=3794;DPB=3794;DPRA=0;EPP=504.62;EPPR=7694.37;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=58.7753;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.971767;PAO=0;PQA=0;PQR=0;PRO=0;QA=7734;QR=124771;RO=3542;RPL=231;RPP=504.62;RPPR=7694.37;RPR=0;RUN=1;SAF=231;SAP=504.62;SAR=0;SRF=3542;SRP=7694.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:549:482,67:482:17007:67:2277:-39.9329,0,-1341.62 0/0:729:659,69:659:23141:69:2322:0,-10.0828,-1844.06 0/0:391:362,29:362:12747:29:961:0,-30.9086,-1027.63 0/0:698:663,20:663:23369:20:677:0,-144.701,-2005.4 0/0:652:648,3:648:22846:3:103:0,-186.499,-2029.83 0/0:775:728,43:728:25661:43:1394:0,-106.69,-2157.4 dDocent_Contig_4865 38 . T C 17897.2 . AB=0.162826;ABP=2616.84;AC=3;AF=0.25;AN=12;AO=431;CIGAR=1X3M1X;DP=2647;DPB=2647.2;DPRA=0;EPP=938.915;EPPR=3531.65;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.999385;PAO=0;PQA=0;PQR=0;PRO=0;QA=17059;QR=63992;RO=1625;RPL=0;RPP=938.915;RPPR=3531.65;RPR=431;RUN=1;SAF=431;SAP=938.915;SAR=0;SRF=1625;SRP=3531.65;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:323:234,60,28:234:9203:60,28:2382,1096:-125.647,0,-738.912,-105.981,-666.865,-854.521 0|1:455:190,158,106:190:7507:158,106:6239,4192:-456.166,0,-570.168,-168.426,-272.796,-754.248 0|1:404:245,96,58:245:9643:96,58:3818,2312:-240.606,0,-764.339,-123.972,-602.853,-899.747 0|0:411:239,86,86:239:9427:86,86:3390,3413:-208.989,-2.03908,-751.758,0,-496.712,-749.72 0|0:528:402,11,113:402:15787:11,113:438,4507:-250.14,-335.086,-1630.14,0,-1262.3,-1264.35 0|0:526:315,20,188:315:12425:20,188:792,7462:-519.391,-549.031,-1565.27,0,-957.083,-965.674 dDocent_Contig_4866 10 . G C 42265.7 . AB=0.458917;ABP=49.0427;AC=6;AF=0.5;AN=12;AO=1441;CIGAR=1X;DP=3140;DPB=3140;DPRA=0;EPP=3132.1;EPPR=3685.83;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.995836;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=57629;QR=66559;RO=1696;RPL=0;RPP=3132.1;RPPR=3685.83;RPR=1441;RUN=1;SAF=1441;SAP=3132.1;SAR=0;SRF=1696;SRP=3685.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:246:97,149:97:3778:149:5995:-465.256,0,-265.982 0/1:260:49,211:49:1925:211:8448:-681.552,0,-95.1888 0/1:300:84,214:84:3291:214:8572:-680.864,0,-206.154 0/1:609:249,360:249:9740:360:14399:-1111.46,0,-692.716 0/1:827:480,347:480:18932:347:13808:-992.736,0,-1453.47 0/1:898:737,160:737:28893:160:6407:-305.928,0,-2327.5 dDocent_Contig_4867 92 . G A 2461.3 . AB=0.125305;ABP=3000.46;AC=4;AF=0.333333;AN=12;AO=398;CIGAR=1X2M;DP=3523;DPB=3523;DPRA=0;EPP=867.256;EPPR=6330.68;GTI=0;LEN=1;MEANALT=3.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.22045e-16;PAIRED=0.997487;PAIREDR=0.985587;PAO=0;PQA=0;PQR=0;PRO=0;QA=13658;QR=96106;RO=2914;RPL=398;RPP=867.256;RPPR=6330.68;RPR=0;RUN=1;SAF=398;SAP=867.256;SAR=0;SRF=2914;SRP=6330.68;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:479:375,43,53:375:12209:43,53:1490,1818:-34.7221,-26.4987,-999.163,0,-864.499,-969.652 0|1:664:528,54,72:528:17399:54,72:1854,2432:-38.1803,-46.5777,-1436.83,0,-1255.96,-1384.83 0|0:336:287,17,25:287:9548:17,25:575,862:0,-39.7784,-807.331,-16.3587,-742.422,-781.511 0|0:729:625,22,65:625:20580:22,65:741,2251:0,-128.1,-1784.99,-5.1847,-1608.67,-1649.14 0|1:664:563,6,74:563:18583:6,74:210,2546:-37.3041,-189.697,-1690.39,0,-1485.41,-1480.22 0|1:651:536,5,109:536:17787:5,109:175,3749:-143.146,-290.259,-1727.75,0,-1424.78,-1406.2 dDocent_Contig_4868 18 . T A 9631.4 . AB=0.133714;ABP=2042.36;AC=1;AF=0.0833333;AN=12;AO=234;CIGAR=1M2X2M1X3M2D1X3M;DP=1750;DPB=1585.93;DPRA=0;EPP=511.135;EPPR=739.139;GTI=0;LEN=1;MEANALT=12.5;MQM=57.4786;MQMR=58.2035;NS=6;NUMALT=6;ODDS=0;PAIRED=0.940171;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=8981;QR=13252;RO=339;RPL=0;RPP=511.135;RPPR=739.139;RPR=234;RUN=1;SAF=234;SAP=511.135;SAR=0;SRF=339;SRP=739.139;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:185:40,20,33,7,15,29,34:40:1563:20,33,7,15,29,34:779,1284,255,361,823,761:-87.4563,-35.7299,-157.264,0,-63.7934,-117.625,-79.0786,-142.867,-107.141,-204.522,-75.5847,-139.372,-103.647,-182.716,-198.617,-37.265,-101.054,-65.3282,-144.399,-140.906,-156.086,-50.4257,-114.211,-78.4878,-157.554,-154.063,-115.749,-167.736 0|0:384:83,47,44,15,10,79,97:83:3262:47,44,15,10,79,97:1742,1642,519,240,2605,2076:-180.065,-65.8305,-319.328,-77.5699,-206,-331.97,-163.818,-292.245,-303.984,-426.943,-189.165,-317.591,-329.33,-415.573,-453.794,0,-128.433,-140.172,-226.417,-251.764,-243.868,-73.1736,-201.599,-213.338,-299.578,-324.924,-135.78,-311.607 0|0:361:64,52,90,37,8,45,53:64:2508:52,90,37,8,45,53:1986,3475,1361,191,1156,1188:-253.112,-110.252,-299.911,0,-43.1908,-178.226,-161.125,-204.313,-94.0649,-355.298,-259.76,-302.947,-192.701,-353.818,-462.659,-187.756,-230.943,-120.698,-281.814,-380.446,-379.517,-195.67,-238.857,-128.614,-289.728,-388.358,-316.359,-385.021 0|0:343:76,29,57,8,8,78,63:76:2957:29,57,8,8,78,63:1119,2144,302,188,2138,1393:-144.803,-77.1302,-310.496,0,-151.554,-224.944,-142.993,-294.54,-217.415,-382.677,-155.33,-306.876,-229.752,-372.735,-395.012,-11.1065,-162.657,-85.5325,-228.517,-240.854,-229.723,-78.1783,-229.724,-152.601,-295.582,-307.919,-163.713,-301.303 1|0:174:27,39,35,3,4,25,37:27:1066:39,35,3,4,25,37:1538,1379,110,123,489,810:-138.444,-19.9923,-95.8152,-39.0233,0,-116.047,-138.344,-99.3272,-118.355,-224.992,-137.789,-98.7721,-117.8,-217.113,-224.136,-115.668,-76.6521,-95.681,-194.99,-194.435,-195.692,-94.394,-55.3777,-74.4074,-173.716,-173.161,-151.052,-170.804 0|0:303:49,47,61,3,0,48,72:49:1896:47,61,3,0,48,72:1817,2388,119,0,1248,1599:-170.482,-35.9816,-177.16,0,-6.07631,-136.966,-176.195,-182.271,-146.291,-330.612,-185.233,-191.308,-155.329,-331.515,-340.552,-94.226,-100.302,-64.3228,-240.509,-249.547,-235.097,-82.3846,-88.4603,-52.4831,-228.664,-237.701,-146.709,-216.027 dDocent_Contig_4869 13 . G A 1385.06 . AB=0.0991568;ABP=4140.99;AC=4;AF=0.333333;AN=12;AO=384;CIGAR=1X;DP=4195;DPB=4195;DPRA=0;EPP=836.856;EPPR=7889.87;GTI=0;LEN=1;MEANALT=1.16667;MQM=58.4245;MQMR=42.4051;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997396;PAIREDR=0.957173;PAO=0;PQA=0;PQR=0;PRO=0;QA=15292;QR=149195;RO=3806;RPL=0;RPP=836.856;RPPR=8267.63;RPR=384;RUN=1;SAF=384;SAP=836.856;SAR=0;SRF=3762;SRP=7889.87;SRR=44;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:454:410,44:410:16026:44:1723:-18.5604,0,-1044.29 0/1:796:724,72:724:28534:72:2848:-11.6838,0,-1978.31 0/0:556:516,40:516:20335:40:1605:0,-23.0344,-1389.46 0/1:824:731,88:731:28671:88:3526:-63.3348,0,-1929.36 0/0:674:624,50:624:24254:50:2005:0,-22.26,-1633.47 0/1:891:801,90:801:31375:90:3585:-52.1494,0,-2095.98 dDocent_Contig_4872 103 . N T 671.333 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=25;CIGAR=3X;DP=25;DPB=25;DPRA=0;EPP=57.2971;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=731;QR=0;RO=0;RPL=0;RPP=57.2971;RPPR=0;RPR=25;RUN=1;SAF=0;SAP=57.2971;SAR=25;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:8:0,8:0:0:8:256:-23.354,-2.40824,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:8:0,8:0:0:8:227:-20.7105,-2.40824,0 1|1:9:0,9:0:0:9:248:-22.5916,-2.70927,0 dDocent_Contig_4874 34 . G A 11766.3 . AB=0.462138;ABP=14.1917;AC=3;AF=0.25;AN=12;AO=415;CIGAR=1X2M1X;DP=1537;DPB=1537;DPRA=1.40532;EPP=904.171;EPPR=2428.54;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=16136;QR=42807;RO=1117;RPL=0;RPP=904.171;RPPR=2428.54;RPR=415;RUN=1;SAF=415;SAP=904.171;SAR=0;SRF=1117;SRP=2428.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:164:143,21:143:5482:21:811:-23.9336,0,-443.961 0|0:179:179,0:179:6809:0:0:0,-53.8844,-612.655 0|0:199:199,0:199:7680:0:0:0,-59.905,-690.959 0|0:261:257,0:257:9788:0:0:0,-77.3647,-880.328 0|1:412:204,207:204:7838:207:8028:-598.4,0,-581.362 0|1:322:135,187:135:5210:187:7297:-559.523,0,-371.917 dDocent_Contig_4875 98 . N T 206.888 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=206;QR=0;RO=0;RPL=8;RPP=20.3821;RPPR=0;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:41:-3.89396,-0.60206,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:2:0,2:0:0:2:27:-2.56496,-0.60206,0 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_4876 1 . N G 73.0928 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=77;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:77:-7.3082,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_4877 28 . G C 131.653 . AB=0.163265;ABP=51.2702;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=310;DPB=310;DPRA=1.62573;EPP=35.5824;EPPR=643.595;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=603;QR=11719;RO=295;RPL=0;RPP=35.5824;RPPR=643.595;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=295;SRP=643.595;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:37,0:37:1443:0:0:0,-11.1381,-130.115 0/1:49:41,8:41:1639:8:323:-14.6881,0,-132.993 0/0:27:27,0:27:1082:0:0:0,-8.12781,-97.6669 0/0:26:26,0:26:1027:0:0:0,-7.82678,-92.724 0/0:81:81,0:81:3228:0:0:0,-24.3834,-290.574 0/0:90:83,7:83:3300:7:280:0,-1.52164,-271.495 dDocent_Contig_4878 98 . N T 241.27 . AB=0;ABP=0;AC=10;AF=0.833333;AN=12;AO=9;CIGAR=1X;DP=10;DPB=10;DPRA=1.8;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=244;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:1:0,0:0:0:0:0:0,0,0 1/1:3:0,3:0:0:3:84:-7.83806,-0.90309,0 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:3:0,3:0:0:3:85:-7.93212,-0.90309,0 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 dDocent_Contig_4879 39 . A G 37.3724 . AB=0.125;ABP=71.4117;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=238;DPB=238;DPRA=1.53846;EPP=18.2106;EPPR=504.62;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.571429;PAIREDR=0.978355;PAO=0;PQA=0;PQR=0;PRO=0;QA=242;QR=7966;RO=231;RPL=0;RPP=18.2106;RPPR=504.62;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=231;SRP=504.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:551:0:0:0,-4.81648,-49.9159 0/0:30:30,0:30:1053:0:0:0,-9.0309,-95.0812 0/0:32:32,0:32:1117:0:0:0,-9.63296,-100.838 0/0:32:32,0:32:1075:0:0:0,-9.63296,-97.0481 0/1:56:49,7:49:1669:7:242:-5.26003,0,-133.636 0/0:72:72,0:72:2501:0:0:0,-21.6742,-225.349 dDocent_Contig_4881 16 . T C 2633.38 . AB=0.290667;ABP=145.743;AC=6;AF=0.5;AN=12;AO=109;CIGAR=1X;DP=375;DPB=375;DPRA=0;EPP=239.701;EPPR=580.622;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.972477;PAIREDR=0.906015;PAO=0;PQA=0;PQR=0;PRO=0;QA=4283;QR=10411;RO=266;RPL=0;RPP=239.701;RPPR=580.622;RPR=109;RUN=1;SAF=109;SAP=239.701;SAR=0;SRF=266;SRP=580.622;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:50:45,5:45:1745:5:191:-2.50478,0,-142.235 0/1:63:53,10:53:2087:10:394:-16.8544,0,-169.071 0/1:41:22,19:22:883:19:736:-54.2169,0,-67.436 0/1:93:74,19:74:2880:19:756:-40.3694,0,-231.326 0/1:62:29,33:29:1137:33:1293:-97.9816,0,-83.9531 0/1:66:43,23:43:1679:23:913:-62.6108,0,-131.481 dDocent_Contig_4883 39 . G A 51.822 . AB=0.0982659;ABP=245.525;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X;DP=440;DPB=440;DPRA=1.25641;EPP=50.7827;EPPR=910.686;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.973684;PAO=0;PQA=0;PQR=0;PRO=0;QA=846;QR=16649;RO=418;RPL=0;RPP=50.7827;RPPR=910.686;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=418;SRP=910.686;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:48,0:48:1897:0:0:0,-14.4494,-170.934 0/1:60:54,6:54:2161:6:235:-3.45839,0,-176.605 0/0:70:70,0:70:2766:0:0:0,-21.0721,-249.057 0/0:72:67,5:67:2698:5:182:0,-4.94916,-226.211 0/0:77:77,0:77:3073:0:0:0,-23.1793,-276.646 0/1:113:102,11:102:4054:11:429:-4.94306,0,-330.829 dDocent_Contig_4884 47 . C T 458.902 . AB=0.126437;ABP=741.186;AC=3;AF=0.25;AN=12;AO=131;CIGAR=1X;DP=1269;DPB=1269;DPRA=0;EPP=278.854;EPPR=2456.8;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.990334;PAO=0;PQA=0;PQR=0;PRO=0;QA=4446;QR=44865;RO=1138;RPL=1;RPP=278.854;RPPR=2456.8;RPR=130;RUN=1;SAF=131;SAP=287.473;SAR=0;SRF=1138;SRP=2474.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:211:185,26:185:7335:26:841:-12.4573,0,-596.286 0/0:244:227,17:227:8943:17:573:0,-21.5687,-752.488 0/1:179:156,23:156:6123:23:775:-16.1698,0,-496.975 0/0:256:233,23:233:9218:23:815:0,-3.39699,-755.442 0/0:160:146,14:146:5791:14:463:0,-6.18683,-479.029 0/1:219:191,28:191:7455:28:979:-22.485,0,-604.674 dDocent_Contig_4885 10 . C T 317.566 . AB=0.0970745;ABP=1063.44;AC=1;AF=0.0833333;AN=12;AO=126;CIGAR=1X;DP=5733;DPB=5733;DPRA=0.813793;EPP=276.616;EPPR=12165.4;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5020;QR=222476;RO=5601;RPL=0;RPP=276.616;RPPR=12165.4;RPR=126;RUN=1;SAF=126;SAP=276.616;SAR=0;SRF=5601;SRP=12165.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:668:651,15:651:25774:15:605:0,-145.913,-2262.68 0/0:954:936,18:936:37273:18:724:0,-221.697,-3285.66 0/1:752:679,73:679:26998:73:2884:-33.2795,0,-2201.05 0/0:900:883,17:883:35015:17:685:0,-208.947,-3086.21 0/0:1131:1128,0:1128:44799:0:0:0,-339.562,-4027.54 0/0:1328:1324,3:1324:52617:3:122:0,-388.496,-4719.19 dDocent_Contig_4886 107 . N T 222.856 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=222;QR=0;RO=0;RPL=0;RPP=18.2106;RPPR=0;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:2:0,2:0:0:2:63:-5.98364,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:30:-2.99957,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:2:0,2:0:0:2:59:-5.60426,-0.60206,0 dDocent_Contig_4887 98 . N C 313.643 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=12;CIGAR=1X;DP=12;DPB=12;DPRA=0;EPP=29.068;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=329;QR=0;RO=0;RPL=12;RPP=29.068;RPPR=0;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:6:0,6:0:0:6:186:-17.0452,-1.80618,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 1/1:2:0,2:0:0:2:41:-3.89396,-0.60206,0 1/1:3:0,3:0:0:3:71:-6.62579,-0.90309,0 dDocent_Contig_4889 71 . T G 243.318 . AB=0.294118;ABP=15.5282;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=185;DPB=185;DPRA=1.12583;EPP=24.725;EPPR=383.018;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.7429;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.582857;PAO=0;PQA=0;PQR=0;PRO=0;QA=397;QR=6893;RO=175;RPL=5;RPP=3.0103;RPPR=30.4205;RPR=5;RUN=1;SAF=5;SAP=3.0103;SAR=5;SRF=111;SRP=30.4205;SRR=64;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:664:0:0:0,-5.11751,-60.0941 0/0:33:33,0:33:1268:0:0:0,-9.93399,-114.398 0/0:30:30,0:30:1162:0:0:0,-9.0309,-104.67 0/0:29:29,0:29:1163:0:0:0,-8.72987,-104.95 0/1:34:24,10:24:939:10:397:-25.8547,0,-74.5834 0/0:42:42,0:42:1697:0:0:0,-12.6433,-152.948 dDocent_Contig_4890 70 . A G 2703.14 . AB=0.377104;ABP=41.9725;AC=1;AF=0.0833333;AN=12;AO=113;CIGAR=1X;DP=1001;DPB=1001;DPRA=2.16216;EPP=248.387;EPPR=1929.11;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996618;PAO=0;PQA=0;PQR=0;PRO=0;QA=4049;QR=31980;RO=887;RPL=113;RPP=248.387;RPPR=1929.11;RPR=0;RUN=1;SAF=113;SAP=248.387;SAR=0;SRF=887;SRP=1929.11;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:162:162,0:162:5865:0:0:0,-48.7669,-527.926 0/0:126:126,0:126:4534:0:0:0,-37.9298,-408.204 0/0:76:76,0:76:2722:0:0:0,-22.8783,-245.208 0/0:117:117,0:117:4237:0:0:0,-35.2205,-381.488 0/0:223:221,1:221:7995:1:37:0,-63.3557,-715.972 0/1:297:185,112:185:6627:112:4012:-271.837,0,-507.063 dDocent_Contig_4891 32 . G T 5450.65 . AB=0.169274;ABP=1703.62;AC=3;AF=0.25;AN=12;AO=340;CIGAR=1X1M1X;DP=3545;DPB=3545;DPRA=0.904517;EPP=741.311;EPPR=6916.98;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998744;PAO=0;PQA=0;PQR=0;PRO=0;QA=13568;QR=122784;RO=3184;RPL=0;RPP=741.311;RPPR=6916.98;RPR=340;RUN=1;SAF=340;SAP=741.311;SAR=0;SRF=3184;SRP=6916.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:377:303,72:303:11679:72:2880:-146.126,0,-937.356 0|1:725:612,111:612:23610:111:4412:-179.004,0,-1905.32 0|0:493:453,37:453:17451:37:1476:0,-14.7263,-1436.45 0|1:688:566,120:566:21818:120:4800:-225.157,0,-1755.5 0|0:485:478,0:478:18421:0:0:0,-143.892,-1656.44 0|0:777:772,0:772:29805:0:0:0,-232.395,-2680.12 dDocent_Contig_4892 29 . T C 58.0725 . AB=0.0977444;ABP=189.937;AC=2;AF=0.166667;AN=12;AO=30;CIGAR=1X;DP=563;DPB=563;DPRA=0.730579;EPP=68.1545;EPPR=1160.41;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1188;QR=21264;RO=533;RPL=0;RPP=68.1545;RPPR=1160.41;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=533;SRP=1160.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:87:78,9:78:3079:9:365:-7.02487,0,-250.999 0/0:121:121,0:121:4796:0:0:0,-36.4246,-431.541 0/0:143:132,11:132:5290:11:442:0,-2.91198,-435.802 0/0:119:117,2:117:4692:2:77:0,-28.5144,-414.879 0/1:46:42,4:42:1688:4:158:-0.751977,0,-138.295 0/0:47:43,4:43:1719:4:146:0,-0.655769,-141.44 dDocent_Contig_4893 74 . A G 258.399 . AB=0.131868;ABP=538.6;AC=1;AF=0.0833333;AN=12;AO=106;CIGAR=1X;DP=2464;DPB=2464;DPRA=0.795556;EPP=233.186;EPPR=5123.34;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.941052;PAO=0;PQA=0;PQR=0;PRO=0;QA=3181;QR=75557;RO=2358;RPL=106;RPP=233.186;RPPR=5123.34;RPR=0;RUN=1;SAF=106;SAP=233.186;SAR=0;SRF=2358;SRP=5123.34;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:308:300,8:300:9630:8:254:0,-69.5459,-843.611 0/0:350:340,10:340:10930:10:293:0,-78.7021,-957.085 0/0:317:290,27:290:9320:27:784:0,-24.5935,-768.043 0/1:455:395,60:395:12608:60:1823:-27.3627,0,-997.755 0/0:495:495,0:495:15843:0:0:0,-149.01,-1425.8 0/0:539:538,1:538:17226:1:27:0,-159.555,-1547.53 dDocent_Contig_4894 10 . C G 17870.4 . AB=0.0821319;ABP=3474.68;AC=1;AF=0.0833333;AN=12;AO=188;CIGAR=1X2M1X;DP=2289;DPB=2289;DPRA=0;EPP=411.247;EPPR=3036.56;GTI=0;LEN=1;MEANALT=4.5;MQM=24.1915;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.987831;PAO=0;PQA=0;PQR=0;PRO=0;QA=7340;QR=55141;RO=1397;RPL=0;RPP=411.247;RPPR=3036.56;RPR=188;RUN=1;SAF=188;SAP=411.247;SAR=0;SRF=1397;SRP=3036.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:385:257,14,111:257:10108:14,111:547,4173:-264.605,-319.858,-1147.07,0,-809.453,-798.159 0|0:520:334,11,171:334:13100:11,171:438,6593:-440.964,-523.663,-1597.62,0,-1059.56,-1025.93 0|0:401:285,13,102:285:11337:13,102:507,3782:-223.724,-287.356,-1216.88,0,-911.398,-902.863 0|0:561:361,5,190:361:14286:5,190:198,7266:-487.595,-586.372,-1760.59,0,-1165.92,-1118.62 0|1:153:49,79,24:49:1938:79,24:3077,927:-135.802,0,-135.713,-74.3922,-83.3685,-226.708 0|0:269:111,66,90:111:4372:66,90:2573,3403:-245.569,-152.313,-492.112,0,-233.078,-332.655 dDocent_Contig_4895 12 . G A 1776.34 . AB=0.236467;ABP=214.744;AC=2;AF=0.166667;AN=12;AO=119;CIGAR=1X3M1X2M1X;DP=993;DPB=993;DPRA=0;EPP=261.416;EPPR=1866.13;GTI=0;LEN=1;MEANALT=1.83333;MQM=44.1176;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.865967;PAO=0;PQA=0;PQR=0;PRO=0;QA=4675;QR=33615;RO=858;RPL=0;RPP=261.416;RPPR=1866.13;RPR=119;RUN=1;SAF=119;SAP=261.416;SAR=0;SRF=858;SRP=1866.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:152:144,8:144:5591:8:318:0,-17.8863,-475.227 0|0:164:153,10:153:5997:10:388:0,-15.7804,-505.897 0|0:151:142,9:142:5554:9:353:0,-14.4409,-468.753 0|0:175:163,9:163:6402:9:357:0,-20.693,-544.504 0|1:118:78,37:78:3083:37:1453:-91.7218,0,-242.648 0|1:233:178,46:178:6988:46:1806:-89.1342,0,-560.855 dDocent_Contig_4896 95 . G T 1491.28 . AB=0.25072;ABP=190.301;AC=2;AF=0.166667;AN=12;AO=132;CIGAR=1X;DP=1053;DPB=1053;DPRA=0;EPP=272.536;EPPR=1708.32;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.931818;PAIREDR=0.904348;PAO=0;PQA=0;PQR=0;PRO=0;QA=4318;QR=31003;RO=920;RPL=132;RPP=289.645;RPPR=2000.76;RPR=0;RUN=1;SAF=130;SAP=272.536;SAR=2;SRF=885;SRP=1708.32;SRR=35;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:142:134,8:134:4568:8:273:0,-17.8436,-386.395 0/0:168:150,17:150:5125:17:543:0,-1.28496,-412.237 0/0:235:227,8:227:7540:8:246:0,-48.3007,-656.241 0/1:251:214,37:214:7279:37:1237:-36.0712,0,-579.643 0/0:161:149,12:149:4990:12:409:0,-11.3274,-412.139 0/1:96:46,50:46:1501:50:1610:-116.278,0,-106.474 dDocent_Contig_4897 18 . T C 1052.74 . AB=0.136678;ABP=665.723;AC=1;AF=0.0833333;AN=12;AO=98;CIGAR=1X;DP=3244;DPB=3244;DPRA=1.18257;EPP=215.815;EPPR=6827.95;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999682;PAO=0;PQA=0;PQR=0;PRO=0;QA=3856;QR=124122;RO=3143;RPL=0;RPP=215.815;RPPR=6827.95;RPR=98;RUN=1;SAF=98;SAP=215.815;SAR=0;SRF=3143;SRP=6827.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:424:424,0:424:16860:0:0:0,-127.637,-1516.1 0/0:521:520,1:520:20531:1:11:0,-155.737,-1845.1 0/0:558:555,1:555:21880:1:41:0,-163.646,-1963.49 0/0:540:539,0:539:21260:0:0:0,-162.255,-1911.34 0/1:578:499,79:499:19667:79:3119:-106.797,0,-1594.56 0/0:623:606,17:606:23924:17:685:0,-125.562,-2089.25 dDocent_Contig_4898 16 . A G 426.672 . AB=0.0914205;ABP=3095.86;AC=2;AF=0.166667;AN=12;AO=195;CIGAR=1X;DP=4466;DPB=4466;DPRA=1.82855;EPP=426.447;EPPR=9273.03;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999297;PAO=0;PQA=0;PQR=0;PRO=0;QA=7639;QR=166825;RO=4269;RPL=0;RPP=426.447;RPPR=9273.03;RPR=195;RUN=1;SAF=195;SAP=426.447;SAR=0;SRF=4269;SRP=9273.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:520:520,0:520:20235:0:0:0,-156.536,-1819.78 0/0:698:698,0:698:27182:0:0:0,-210.119,-2444.34 0/0:425:425,0:425:16703:0:0:0,-127.938,-1502.08 0/0:690:690,0:690:26959:0:0:0,-207.711,-2424.21 0/1:1088:986,101:986:38546:101:3957:-28.835,0,-3138.62 0/1:1045:950,94:950:37200:94:3682:-17.0541,0,-3030.59 dDocent_Contig_4899 86 . T A 746.484 . AB=0.165289;ABP=356.242;AC=2;AF=0.166667;AN=12;AO=122;CIGAR=1X;DP=2423;DPB=2423;DPRA=0;EPP=267.93;EPPR=4990.88;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995646;PAO=0;PQA=0;PQR=0;PRO=0;QA=4189;QR=78950;RO=2297;RPL=122;RPP=267.93;RPPR=4990.88;RPR=0;RUN=1;SAF=122;SAP=267.93;SAR=0;SRF=2297;SRP=4990.88;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:231:206,25:206:7001:25:858:-7.99714,0,-560.663 0/1:132:96,35:96:3265:35:1212:-69.8731,0,-254.575 0/0:241:225,16:225:7746:16:559:0,-21.9085,-646.583 0/0:348:319,28:319:10912:28:933:0,-20.5334,-897.789 0/0:781:779,1:779:26932:1:35:0,-231.52,-2419.95 0/0:690:672,17:672:23094:17:592:0,-153.887,-2024.44 dDocent_Contig_4900 73 . G A 2956.06 . AB=0.179592;ABP=876.882;AC=3;AF=0.25;AN=12;AO=223;CIGAR=1X;DP=1786;DPB=1786;DPRA=0;EPP=487.249;EPPR=3394.85;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8339;QR=58309;RO=1562;RPL=223;RPP=487.249;RPPR=3394.85;RPR=0;RUN=1;SAF=223;SAP=487.249;SAR=0;SRF=1562;SRP=3394.85;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:264:251,13:251:9257:13:431:0,-40.3725,-793.812 0/1:390:339,50:339:12407:50:1856:-50.1069,0,-999.052 0/1:220:190,30:190:7227:30:1124:-35.2225,0,-584.022 0/1:370:274,96:274:10337:96:3631:-215.498,0,-818.561 0/0:182:179,3:179:6605:3:115:0,-44.0626,-583.666 0/0:360:329,31:329:12476:31:1182:0,-1.70348,-1015.6 dDocent_Contig_4902 41 . A T 1683.52 . AB=0.182004;ABP=432.513;AC=3;AF=0.25;AN=12;AO=114;CIGAR=1X;DP=1985;DPB=1985;DPRA=0.304447;EPP=250.558;EPPR=4065.84;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4556;QR=74127;RO=1871;RPL=0;RPP=250.558;RPPR=4065.84;RPR=114;RUN=1;SAF=114;SAP=250.558;SAR=0;SRF=1871;SRP=4065.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:33,8:33:1305:8:319:-16.7329,0,-105.372 0/1:169:120,49:120:4762:49:1954:-125.183,0,-377.625 0/0:109:101,8:101:4042:8:320:0,-3.64695,-334.595 0/1:279:247,32:247:9799:32:1282:-31.6579,0,-797.33 0/0:787:787,0:787:31163:0:0:0,-236.911,-2801.91 0/0:600:583,17:583:23056:17:681:0,-119.003,-2011.51 dDocent_Contig_4903 40 . A C 537.688 . AB=0.181818;ABP=157.777;AC=3;AF=0.25;AN=12;AO=39;CIGAR=1X;DP=323;DPB=323;DPRA=2.49167;EPP=87.6977;EPPR=619.708;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1501;QR=11166;RO=284;RPL=0;RPP=87.6977;RPPR=619.708;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=284;SRP=619.708;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:45,3:45:1802:3:110:0,-4.19124,-152.135 0/0:24:24,0:24:949:0:0:0,-7.22472,-85.7125 0/1:52:39,13:39:1553:13:484:-28.2302,0,-124.357 0/1:59:46,13:46:1785:13:511:-28.5742,0,-143.111 0/0:75:71,4:71:2765:4:159:0,-7.88529,-234.275 0/1:65:59,6:59:2312:6:237:-2.13635,0,-188.683 dDocent_Contig_4904 98 . N T 196.722 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=196;QR=0;RO=0;RPL=7;RPP=18.2106;RPPR=0;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:20:-1.99996,-0.30103,0 1/1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 1/1:3:0,3:0:0:3:94:-8.77067,-0.90309,0 1/1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 1/1:1:0,1:0:0:1:20:-1.99996,-0.30103,0 dDocent_Contig_4905 16 . T G 411.059 . AB=0.0805556;ABP=553.141;AC=1;AF=0.0833333;AN=12;AO=80;CIGAR=1X2M1X;DP=2992;DPB=2989;DPRA=3.30964;EPP=176.728;EPPR=6044.05;GTI=0;LEN=1;MEANALT=4;MQM=57.05;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.757009;PAO=0;PQA=0;PQR=0;PRO=0;QA=3135;QR=109512;RO=2782;RPL=0;RPP=176.728;RPPR=6044.05;RPR=80;RUN=1;SAF=80;SAP=176.728;SAR=0;SRF=2782;SRP=6044.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:281:247,0,27:247:9637:0,27:0,1093:-15.7883,-90.1428,-882.234,0,-792.112,-783.984 0|0:405:358,0,42:358:14067:0,42:0,1645:-27.4812,-135.25,-1292.19,0,-1156.94,-1144.3 0|0:211:205,0,3:205:8060:0,3:0,120:0,-61.7111,-724.632,-51.8294,-714.747,-713.844 0|1:360:293,29,24:293:11602:29,24:1112,957:-3.05183,0,-946.135,-12.4387,-876.057,-960.086 0|0:831:801,28,0:801:31617:28,0:1112,0:0,-153.6,-2746.69,-241.125,-2755.11,-2842.54 0|0:904:878,23,2:878:34529:23,2:911,79:0,-193.5,-3026.66,-257.802,-3027.09,-3097.28 dDocent_Contig_4906 42 . T A 4819.62 . AB=0.475645;ABP=4.80845;AC=6;AF=0.5;AN=12;AO=166;CIGAR=1X;DP=349;DPB=349;DPRA=0;EPP=363.475;EPPR=400.39;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.939759;PAIREDR=0.885246;PAO=0;PQA=0;PQR=0;PRO=0;QA=6628;QR=7349;RO=183;RPL=0;RPP=363.475;RPPR=400.39;RPR=166;RUN=1;SAF=166;SAP=363.475;SAR=0;SRF=183;SRP=400.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:22,13:22:898:13:521:-36.7,0,-70.588 0/1:83:46,37:46:1859:37:1495:-109.805,0,-142.525 0/1:87:24,63:24:971:63:2482:-197.343,0,-61.4988 0/1:56:43,13:43:1708:13:524:-30.6498,0,-137.079 0/1:59:37,22:37:1470:22:880:-61.7509,0,-114.783 0/1:29:11,18:11:443:18:726:-56.9353,0,-31.4962 dDocent_Contig_4907 10 . C G 229.564 . AB=0.146789;ABP=121.126;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=356;DPB=356;DPRA=1.04598;EPP=39.9253;EPPR=730.454;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.955224;PAO=0;PQA=0;PQR=0;PRO=0;QA=686;QR=13400;RO=335;RPL=0;RPP=39.9253;RPPR=730.454;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=335;SRP=730.454;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:1007:0:0:0,-7.52575,-90.926 0/0:96:95,0:95:3825:0:0:0,-28.5978,-343.845 0/0:53:52,0:52:2056:0:0:0,-15.6536,-184.844 0/1:28:25,3:25:994:3:123:-3.03595,0,-81.3262 0/1:81:66,13:66:2644:13:522:-23.1357,0,-213.887 0/0:73:72,1:72:2874:1:41:0,-17.8806,-254.666 dDocent_Contig_4908 20 . C A 11421.9 . AB=0.224893;ABP=1534.71;AC=6;AF=0.5;AN=12;AO=524;CIGAR=1X;DP=2330;DPB=2330;DPRA=0;EPP=1140.86;EPPR=3920.35;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.999446;PAO=0;PQA=0;PQR=0;PRO=0;QA=20604;QR=71755;RO=1804;RPL=0;RPP=1140.86;RPPR=3920.35;RPR=524;RUN=1;SAF=524;SAP=1140.86;SAR=0;SRF=1804;SRP=3920.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:286:206,79:206:8124:79:3109:-194.022,0,-644.872 0/1:338:258,80:258:10208:80:3179:-184.439,0,-816.343 0/1:450:364,85:364:14494:85:3349:-165.906,0,-1167.8 0/1:498:365,133:365:14588:133:5184:-316.549,0,-1161.88 0/1:333:275,58:275:10933:58:2278:-104.942,0,-883.018 0/1:425:336,89:336:13408:89:3505:-187.559,0,-1077.79 dDocent_Contig_4909 92 . T G 74291.4 . AB=0.846101;ABP=1510.62;AC=9;AF=0.75;AN=12;AO=2683;CIGAR=1X;DP=3031;DPB=3031;DPRA=0;EPP=5829.07;EPPR=754.34;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999627;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=91719;QR=11881;RO=346;RPL=2683;RPP=5829.07;RPPR=754.34;RPR=0;RUN=1;SAF=2683;SAP=5829.07;SAR=0;SRF=346;SRP=754.34;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:455:35,420:35:1224:420:14307:-1177.04,-26.502,0 0/1:585:68,517:68:2350:517:17716:-1418.1,0,-35.6637 0/1:304:44,260:44:1518:260:8887:-708.37,0,-45.4023 1/1:551:47,503:47:1611:503:17187:-1401.33,-20.6381,0 1/1:576:41,534:41:1413:534:18251:-1514.87,-45.9751,0 0/1:560:111,449:111:3765:449:15371:-1214.65,0,-170.488 dDocent_Contig_4910 94 . T G 54262.8 . AB=0.124128;ABP=882.869;AC=2;AF=0.166667;AN=12;AO=135;CIGAR=1X3M1X;DP=1887;DPB=1890.2;DPRA=1.20821;EPP=296.159;EPPR=0;GTI=0;LEN=1;MEANALT=2.6;MQM=60;MQMR=0;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0;PAO=1;PQA=35;PQR=86;PRO=3.5;QA=4552;QR=0;RO=0;RPL=135;RPP=296.159;RPPR=0;RPR=0;RUN=1;SAF=135;SAP=296.159;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:320:0,43,277:0:0:43,277:1436,9391:-878.103,-761.847,-748.903,-116.59,0,-33.2047 1|0:397:0,46,349:0:0:46,349:1564,11985:-1100.12,-973.254,-959.407,-126.914,0,-21.8546 0|0:404:0,25,378:0:0:25,378:833,12910:-1161.48,-1094.06,-1086.54,-113.789,-46.434,0 0|0:414:0,18,396:0:0:18,396:616,13541:-1218.25,-1168.25,-1162.83,-119.208,-68.8633,0 0|0:268:0,0,266:0:0:0,266:0,9108:-819.609,-819.609,-819.609,-80.074,-80.074,0 0|0:84:0,3,81:0:0:3,81:103,2801:-251.942,-243.578,-242.675,-24.3834,-15.7963,0 dDocent_Contig_4911 162 . G C 224.073 . AB=0.229167;ABP=33.5919;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=194;DPB=194;DPRA=0.979592;EPP=29.068;EPPR=398.218;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=478;QR=7201;RO=182;RPL=12;RPP=29.068;RPPR=398.218;RPR=0;RUN=1;SAF=0;SAP=29.068;SAR=12;SRF=0;SRP=398.218;SRR=182;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:667:0:0:0,-5.11751,-60.3596 0/1:18:13,5:13:514:5:195:-12.5027,0,-41.1848 0/1:30:24,6:24:957:6:242:-13.1264,0,-77.4022 0/0:31:31,0:31:1239:0:0:0,-9.33193,-111.781 0/0:50:50,0:50:1986:0:0:0,-15.0515,-178.937 0/0:48:47,1:47:1838:1:41:0,-10.3549,-161.541 dDocent_Contig_4912 17 . A G 1755.29 . AB=0.0373134;ABP=750.515;AC=0;AF=0;AN=12;AO=70;CIGAR=1X2M1X;DP=3810;DPB=3810;DPRA=0.581936;EPP=155.013;EPPR=7598.82;GTI=0;LEN=1;MEANALT=3.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.999428;PAO=0;PQA=0;PQR=0;PRO=0;QA=2771;QR=138747;RO=3498;RPL=0;RPP=155.013;RPPR=7598.82;RPR=70;RUN=1;SAF=70;SAP=155.013;SAR=0;SRF=3498;SRP=7598.82;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:347:295,0,52:295:11662:0,52:0,2087:-83.5464,-172.35,-1132.01,0,-960.064,-944.41 0|0:624:577,11,35:577:22888:11,35:431,1416:0,-138.255,-2018.96,-56.9357,-1905.52,-1930.43 0|0:402:326,15,58:326:12946:15,58:604,2345:-95.2045,-143.558,-1204.78,0,-1015.96,-1048.29 0|0:588:526,44,17:526:20786:44,17:1736,693:0,-15.5172,-1712.67,-101.165,-1668.74,-1806.46 0|0:830:759,0,67:759:30078:0,67:0,2692:0,-228.482,-2704.12,-6.58653,-2482.3,-2462.13 0|0:1019:1015,0,1:1015:40387:0,1:0,41:0,-305.545,-3630.84,-302.161,-3627.45,-3627.15 dDocent_Contig_4913 28 . T C 18145.6 . AB=0.0472441;ABP=1585.88;AC=0;AF=0;AN=12;AO=42;CIGAR=1M1X7M;DP=1690;DPB=1583.22;DPRA=0;EPP=94.2121;EPPR=1868.31;GTI=0;LEN=1;MEANALT=4.25;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1638;QR=33801;RO=859;RPL=0;RPP=94.2121;RPPR=1868.31;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=859;SRP=1868.31;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:165:60,67,6,8,23:60:2315:67,6,8,23:2673,232,313,919:-202.071,0,-169.918,-201.08,-171.035,-389.363,-194.398,-164.352,-365.434,-382.079,-144.44,-114.392,-315.476,-308.794,-327.605 0|0:265:205,49,0,9,2:205:8083:49,0,9,2:1961,0,359,82:-99.8243,0,-650.256,-161.535,-665.007,-826.544,-131.97,-635.441,-796.978,-794.269,-154.767,-658.239,-819.776,-790.21,-819.174 0|0:206:155,30,11,6,3:155:6103:30,11,6,3:1206,437,223,123:-52.729,0,-493.02,-63.4121,-466.074,-562.147,-81.1426,-483.802,-547.209,-581.38,-89.2356,-491.899,-555.306,-573.034,-590.379 0|0:253:151,37,0,19,45:151:5970:37,0,19,45:1489,0,743,1809:-103.62,-26.3556,-506.509,-149.076,-517.647,-640.366,-87.9924,-456.563,-579.281,-573.562,0,-368.573,-491.292,-430.208,-477.746 0|0:384:104,31,0,0,247:104:4066:31,0,0,247:1213,0,0,9802:-775.536,-707.117,-1032.06,-806.843,-1041.39,-1141.11,-806.843,-1041.39,-1141.11,-1141.11,0,-234.553,-334.279,-334.279,-259.925 0|0:417:184,22,0,0,197:184:7264:22,0,0,197:865,0,0,7861:-591.999,-576.242,-1167.32,-647.388,-1173.94,-1245.09,-647.388,-1173.94,-1245.09,-1245.09,0,-526.572,-597.719,-597.719,-538.416 dDocent_Contig_4914 98 . N C 5830.83 . AB=0;ABP=0;AC=8;AF=0.666667;AN=12;AO=198;CIGAR=1M2I9M4X;DP=345;DPB=1138.36;DPRA=0.741007;EPP=432.962;EPPR=0;GTI=0;LEN=1;MEANALT=2.75;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=1.77636e-15;PAIRED=1;PAIREDR=0;PAO=2606;PQA=86319;PQR=1650;PRO=60;QA=6470;QR=0;RO=0;RPL=198;RPP=432.962;RPPR=0;RPR=0;RUN=1;SAF=198;SAP=432.962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:54:0,54:0:0:54:1796:-161.591,-16.2556,0 1|1:47:0,45:0:0:45:1448:-130.281,-13.5464,0 1|1:45:0,42:0:0:42:1358:-122.185,-12.6433,0 1|1:60:0,57:0:0:57:1868:-168.071,-17.1587,0 0|0:46:0,0:0:0:0:0:0,0,0 0|0:93:0,0:0:0:0:0:0,0,0 dDocent_Contig_4917 31 . T C 3473.78 . AB=0.117028;ABP=4117.83;AC=4;AF=0.333333;AN=12;AO=386;CIGAR=1X;DP=5500;DPB=5500;DPRA=0.938716;EPP=841.199;EPPR=11107.9;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999413;PAO=0;PQA=0;PQR=0;PRO=0;QA=15052;QR=199345;RO=5114;RPL=0;RPP=841.199;RPPR=11107.9;RPR=386;RUN=1;SAF=386;SAP=841.199;SAR=0;SRF=5114;SRP=11107.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:543:452,91:452:17542:91:3559:-156.933,0,-1414.18 0/1:904:823,81:823:31996:81:3195:-15.5239,0,-2605.1 0/1:701:610,91:610:23798:91:3552:-108.718,0,-1929.04 0/1:1082:967,115:967:37796:115:4435:-73.4247,0,-3072.95 0/0:966:966,0:966:37714:0:0:0,-290.795,-3391.32 0/0:1304:1296,8:1296:50499:8:311:0,-364.192,-4512.51 dDocent_Contig_4918 20 . A T 2517.84 . AB=0.235169;ABP=290.546;AC=4;AF=0.333333;AN=12;AO=122;CIGAR=1X;DP=674;DPB=674;DPRA=0;EPP=267.93;EPPR=1201.66;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.852459;PAIREDR=0.871377;PAO=0;PQA=0;PQR=0;PRO=0;QA=4888;QR=21866;RO=552;RPL=0;RPP=267.93;RPPR=1201.66;RPR=122;RUN=1;SAF=122;SAP=267.93;SAR=0;SRF=552;SRP=1201.66;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:125:117,8:117:4662:8:321:0,-8.37175,-390.249 0/1:139:100,39:100:3942:39:1562:-98.9723,0,-312.947 0/1:60:44,16:44:1767:16:641:-39.9589,0,-141.181 0/1:151:107,44:107:4208:44:1760:-113.16,0,-333.245 0/0:77:74,3:74:2915:3:123:0,-11.7145,-250.997 0/1:122:110,12:110:4372:12:481:-6.91428,0,-356.708 dDocent_Contig_4919 8 . T C 6306.98 . AB=0.144256;ABP=4155.9;AC=6;AF=0.5;AN=12;AO=545;CIGAR=1X;DP=3778;DPB=3778;DPRA=0;EPP=947.975;EPPR=7014.69;GTI=0;LEN=1;MEANALT=1.5;MQM=54.844;MQMR=59.9895;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=0.13945;PAIREDR=0.960359;PAO=0;PQA=0;PQR=0;PRO=0;QA=20838;QR=123955;RO=3229;RPL=0;RPP=1186.46;RPPR=7014.69;RPR=545;RUN=1;SAF=516;SAP=947.975;SAR=29;SRF=3229;SRP=7014.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:565:455,110:455:17477:110:4212:-195.92,0,-1401.92 0/1:770:674,95:674:25873:95:3625:-91.4796,0,-2095.2 0/1:539:479,58:479:18397:58:2187:-32.6761,0,-1492.87 0/1:668:600,67:600:23012:67:2566:-24.8544,0,-1868.59 0/1:587:480,107:480:18422:107:4112:-153.249,0,-1480.31 0/1:649:541,108:541:20774:108:4136:-143.741,0,-1672.93 dDocent_Contig_4920 14 . T A 59278 . AB=0.88918;ABP=1510.66;AC=9;AF=0.75;AN=12;AO=2168;CIGAR=1X;DP=2383;DPB=2383;DPRA=0;EPP=4676.08;EPPR=452.505;GTI=0;LEN=1;MEANALT=1.5;MQM=43.9331;MQMR=55.7874;NS=6;NUMALT=1;ODDS=0;PAIRED=0.51107;PAIREDR=0.89372;PAO=0;PQA=0;PQR=0;PRO=0;QA=86896;QR=8250;RO=207;RPL=0;RPP=4710.76;RPPR=452.505;RPR=2168;RUN=1;SAF=2164;SAP=4676.08;SAR=4;SRF=207;SRP=452.505;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:289:25,264:25:994:264:10568:-649.831,-8.35759,0 0/1:424:41,382:41:1644:382:15331:-998.523,0,-0.0342698 0/1:252:30,222:30:1199:222:8892:-611.664,0,-32.3243 0/1:470:55,415:55:2174:415:16613:-1085.19,0,-40.4835 1/1:466:19,446:19:748:446:17919:-1370.14,-72.6542,0 1/1:482:37,439:37:1491:439:17573:-1215.7,-9.26428,0 dDocent_Contig_4921 65 . C A 3867.08 . AB=0.155801;ABP=1865.58;AC=3;AF=0.25;AN=12;AO=324;CIGAR=1X;DP=3451;DPB=3451;DPRA=1.3037;EPP=706.567;EPPR=6793.2;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99936;PAO=0;PQA=0;PQR=0;PRO=0;QA=11990;QR=119444;RO=3127;RPL=324;RPP=706.567;RPPR=6793.2;RPR=0;RUN=1;SAF=324;SAP=706.567;SAR=0;SRF=3127;SRP=6793.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:481:404,77:404:15380:77:2879:-114.496,0,-1238.6 0/1:559:483,76:483:18407:76:2810:-84.8203,0,-1487.3 0/0:509:468,41:468:17893:41:1548:0,-13.6332,-1469.73 0/1:770:641,129:641:24250:129:4715:-192.613,0,-1949.21 0/0:459:459,0:459:17597:0:0:0,-138.173,-1582.7 0/0:673:672,1:672:25917:1:38:0,-198.796,-2326.97 dDocent_Contig_4922 13 . G A 11802.3 . AB=0.260509;ABP=963.021;AC=4;AF=0.333333;AN=12;AO=557;CIGAR=1X;DP=2950;DPB=2950;DPRA=0;EPP=1212.52;EPPR=5197.17;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.994614;PAIREDR=0.97199;PAO=0;PQA=0;PQR=0;PRO=0;QA=21777;QR=94811;RO=2392;RPL=0;RPP=1212.52;RPPR=5197.17;RPR=557;RUN=1;SAF=557;SAP=1212.52;SAR=0;SRF=2392;SRP=5197.17;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:372:361,10:361:14238:10:396:0,-76.0589,-1244.4 0/1:636:570,66:570:22649:66:2564:-39.4335,0,-1845.03 0/1:378:339,39:339:13386:39:1532:-24.3313,0,-1089.99 0/0:651:606,45:606:24115:45:1738:0,-39.3281,-2011.63 0/1:465:273,192:273:10824:192:7587:-542.504,0,-833.479 0/1:448:243,205:243:9599:205:7960:-581.185,0,-728.49 dDocent_Contig_4923 7 . A G 5741.34 . AB=0.221622;ABP=1123.74;AC=4;AF=0.333333;AN=12;AO=379;CIGAR=1X;DP=2172;DPB=2172;DPRA=1.31359;EPP=825.998;EPPR=3855.2;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999436;PAO=0;PQA=0;PQR=0;PRO=0;QA=12317;QR=67728;RO=1774;RPL=0;RPP=825.998;RPPR=3855.2;RPR=379;RUN=1;SAF=379;SAP=825.998;SAR=0;SRF=1774;SRP=3855.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:341:247,89:247:9340:89:2953:-164.669,0,-739.037 0/1:433:331,101:331:12678:101:3295:-166.476,0,-1010.25 0/1:430:330,96:330:12666:96:3043:-145.634,0,-1010.99 0/1:461:370,83:370:14140:83:2677:-104.577,0,-1135.42 0/0:287:287,0:287:10922:0:0:0,-86.3956,-982.593 0/0:220:209,10:209:7982:10:349:0,-34.3149,-686.461 dDocent_Contig_4924 107 . N G 562.968 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=18;CIGAR=1X;DP=18;DPB=18;DPRA=0;EPP=42.0968;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=604;QR=0;RO=0;RPL=0;RPP=42.0968;RPPR=0;RPR=18;RUN=1;SAF=0;SAP=42.0968;SAR=18;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:104:-9.70309,-0.90309,0 1/1:6:0,6:0:0:6:207:-18.9682,-1.80618,0 1/1:3:0,3:0:0:3:104:-9.70309,-0.90309,0 1/1:6:0,6:0:0:6:189:-17.32,-1.80618,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_4926 98 . N A 225.914 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=8;CIGAR=2X;DP=8;DPB=11;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=10.1503;PAIRED=1;PAIREDR=0;PAO=3;PQA=91;PQR=0;PRO=0;QA=251;QR=0;RO=0;RPL=8;RPP=20.3821;RPPR=0;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:8:0,8:0:0:8:251:-22.5913,-2.40824,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_4927 53 . A T 1913.24 . AB=0.166667;ABP=663.138;AC=3;AF=0.25;AN=12;AO=126;CIGAR=1M1I1M1X;DP=1888;DPB=1930;DPRA=0.431438;EPP=276.616;EPPR=3816.12;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.966401;PAO=0;PQA=0;PQR=0;PRO=0;QA=4933;QR=68908;RO=1756;RPL=126;RPP=276.616;RPPR=3816.12;RPR=0;RUN=1;SAF=126;SAP=276.616;SAR=0;SRF=1756;SRP=3816.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:197:187,10:187:7303:10:395:0,-23.3943,-621.094 0|1:152:94,57:94:3685:57:2226:-154.662,0,-285.843 0|1:203:180,23:180:7067:23:900:-20.2008,0,-574.641 0|1:329:294,34:294:11600:34:1336:-21.6832,0,-944.494 0|0:598:594,0:594:23278:0:0:0,-178.812,-2092.91 0|0:409:407,2:407:15975:2:76:0,-115.907,-1429.45 dDocent_Contig_4928 12 . C T 1805.47 . AB=0.262976;ABP=144.036;AC=3;AF=0.25;AN=12;AO=87;CIGAR=1X;DP=758;DPB=758;DPRA=0;EPP=191.928;EPPR=1457.9;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.995522;PAO=0;PQA=0;PQR=0;PRO=0;QA=3433;QR=26792;RO=670;RPL=0;RPP=191.928;RPPR=1457.9;RPR=87;RUN=1;SAF=87;SAP=191.928;SAR=0;SRF=670;SRP=1457.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:69:58,11:58:2325:11:439:-19.0936,0,-188.636 0/0:72:70,2:70:2783:2:49:0,-17.0218,-245.918 0/1:124:71,53:71:2835:53:2106:-152.385,0,-217.924 0/1:96:84,12:84:3363:12:476:-14.29,0,-273.817 0/0:149:142,7:142:5672:7:281:0,-19.1931,-484.631 0/0:248:245,2:245:9814:2:82:0,-66.7845,-874.948 dDocent_Contig_4929 19 . T A 1324.67 . AB=0.286486;ABP=76.2652;AC=4;AF=0.333333;AN=12;AO=55;CIGAR=1X;DP=261;DPB=261;DPRA=1.38182;EPP=122.441;EPPR=450.334;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2222;QR=8195;RO=206;RPL=0;RPP=122.441;RPPR=450.334;RPR=55;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=206;SRP=450.334;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:15,9:15:593:9:363:-25.8097,0,-46.4843 0/1:35:24,11:24:943:11:441:-29.5099,0,-74.6319 0/1:78:49,29:49:1954:29:1173:-82.366,0,-152.577 0/0:43:41,2:41:1631:2:82:0,-5.16461,-139.24 0/0:33:33,0:33:1309:0:0:0,-9.93399,-118.069 0/1:48:44,4:44:1765:4:163:-0.608988,0,-144.616 dDocent_Contig_4930 98 . N A 337.272 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=11;CIGAR=1X;DP=11;DPB=11;DPRA=0;EPP=26.8965;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=354;QR=0;RO=0;RPL=11;RPP=26.8965;RPPR=0;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:100:-9.33037,-0.90309,0 1/1:3:0,3:0:0:3:99:-9.23758,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:56:-5.3191,-0.60206,0 1/1:3:0,3:0:0:3:99:-9.2374,-0.90309,0 dDocent_Contig_4931 1 . N C 110.021 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=118;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:118:-11.0016,-0.90309,0 ./.:.:.:.:.:.:.:. dDocent_Contig_4932 72 . T G 15551.1 . AB=0.0462653;ABP=3211.06;AC=0;AF=0;AN=12;AO=83;CIGAR=2M1X6M;DP=3515;DPB=3429.33;DPRA=1.2563;EPP=183.243;EPPR=5687.98;GTI=0;LEN=1;MEANALT=7.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.996203;PAO=0;PQA=0;PQR=0;PRO=0;QA=2812;QR=98330;RO=2634;RPL=83;RPP=183.243;RPPR=5722.67;RPR=0;RUN=1;SAF=83;SAP=183.243;SAR=0;SRF=2630;SRP=5687.98;SRR=4;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:565:424,117,17:424:15731:117,17:4026,587:-199.355,0,-1252.05,-279.299,-1239.58,-1561.39 0|0:731:556,109,60:556:20581:109,60:3787,2021:-140.467,0,-1650.92,-144.091,-1519.99,-1809.75 0|0:498:387,101,6:387:14539:101,6:3634,204:-179.977,0,-1160.7,-279.931,-1174.55,-1469.18 0|0:677:320,354,0:320:12208:354,0:12646,0:-934.665,0,-895.068,-1031,-1001.63,-2032.52 0|0:476:472,0,0:472:17456:0,0:0,0:0,-142.086,-1570.18,-142.086,-1570.18,-1570.18 0|0:568:475,86,0:475:17815:86,0:3098,0:-109.868,0,-1433.44,-252.857,-1459.33,-1712.09 dDocent_Contig_4933 22 . G A 170.347 . AB=0.118421;ABP=195.243;AC=1;AF=0.0833333;AN=12;AO=29;CIGAR=1X;DP=1060;DPB=1060;DPRA=0.346645;EPP=65.983;EPPR=2237.46;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1157;QR=41112;RO=1029;RPL=0;RPP=65.983;RPPR=2237.46;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=1029;SRP=2237.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:73:70,3:70:2794:3:122:0,-10.6027,-240.194 0/0:103:98,4:98:3928:4:163:0,-16.0556,-338.452 0/1:152:134,18:134:5307:18:711:-18.5576,0,-431.726 0/0:106:101,4:101:4064:4:161:0,-17.1406,-350.849 0/0:340:340,0:340:13599:0:0:0,-102.35,-1222.87 0/0:286:286,0:286:11420:0:0:0,-86.0946,-1027.01 dDocent_Contig_4935 98 . N G 158.518 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=160;QR=0;RO=0;RPL=8;RPP=20.3821;RPPR=0;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:63:-5.87892,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:10:-0.999996,-0.30103,0 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 1/1:2:0,2:0:0:2:18:-1.70999,-0.60206,0 dDocent_Contig_4936 15 . G A 11256.4 . AB=0.20282;ABP=2124.82;AC=6;AF=0.5;AN=12;AO=561;CIGAR=1X;DP=2766;DPB=2766;DPRA=0;EPP=1221.21;EPPR=4791.11;GTI=0;LEN=1;MEANALT=1;MQM=57.7807;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.41533;PAIREDR=0.838095;PAO=0;PQA=0;PQR=0;PRO=0;QA=21996;QR=85002;RO=2205;RPL=0;RPP=1221.21;RPPR=4791.11;RPR=561;RUN=1;SAF=561;SAP=1221.21;SAR=0;SRF=2205;SRP=4791.11;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:429:345,84:345:13207:84:3292:-166.084,0,-1058.82 0/1:591:476,115:476:18301:115:4483:-222.112,0,-1468.08 0/1:430:338,92:338:13110:92:3639:-196.941,0,-1049.74 0/1:726:628,98:628:24283:98:3838:-123.186,0,-1965.3 0/1:231:163,68:163:6301:68:2661:-170.098,0,-497.416 0/1:359:255,104:255:9800:104:4083:-258.44,0,-773.521 dDocent_Contig_4937 9 . C G 3687.06 . AB=0.0720721;ABP=179.565;AC=0;AF=0;AN=12;AO=8;CIGAR=1X2M1X;DP=306;DPB=306;DPRA=0.822222;EPP=20.3821;EPPR=356.96;GTI=0;LEN=1;MEANALT=2;MQM=32.125;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=308;QR=6394;RO=163;RPL=0;RPP=20.3821;RPPR=356.96;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=163;SRP=356.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:40:22,0,17:22:857:0,17:0,641:-45.6018,-52.2245,-122.667,0,-70.4344,-65.3168 0|0:25:7,3,15:7:276:3,15:110,567:-43.8564,-38.1544,-59.9663,0,-14.9618,-18.2428 0|0:35:27,1,7:27:1050:1,7:39,283:-15.4177,-22.4389,-108.404,0,-85.3704,-84.3921 0|0:45:41,0,3:41:1614:0,3:0,105:0,-12.3422,-145.146,-4.12659,-136.882,-135.979 0|0:51:16,4,31:16:639:4,31:159,1226:-95.3134,-89.4932,-140.924,0,-42.0581,-43.356 0|0:110:50,0,60:50:1958:0,60:0,2345:-177.739,-192.79,-353.793,0,-161.393,-143.332 dDocent_Contig_4938 98 . N G 106.198 . AB=0;ABP=0;AC=4;AF=0.666667;AN=6;AO=4;CIGAR=1X;DP=5;DPB=5;DPRA=2;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=105;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:1:0,0:0:0:0:0:0,0,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:87:-8.11804,-0.90309,0 1/1:1:0,1:0:0:1:18:-1.79997,-0.30103,0 dDocent_Contig_4940 89 . T C 3419.87 . AB=0.181323;ABP=1136.5;AC=5;AF=0.416667;AN=12;AO=247;CIGAR=1X;DP=1514;DPB=1514;DPRA=0;EPP=539.364;EPPR=2752.09;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8681;QR=44947;RO=1266;RPL=247;RPP=539.364;RPPR=2752.09;RPR=0;RUN=1;SAF=247;SAP=539.364;SAR=0;SRF=1266;SRP=2752.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:174:152,22:152:5392:22:755:-15.8852,0,-433.03 0/1:199:143,56:143:5078:56:1967:-117.4,0,-397.257 0/1:385:314,70:314:11150:70:2471:-106.972,0,-887.713 0/0:229:215,14:215:7621:14:499:0,-23.6898,-640.678 0/1:244:219,25:219:7757:25:887:-6.69825,0,-624.702 0/1:283:223,60:223:7949:60:2102:-104.254,0,-630.234 dDocent_Contig_4941 38 . C T 2593.39 . AB=0.22973;ABP=331.666;AC=4;AF=0.333333;AN=12;AO=131;CIGAR=1X;DP=763;DPB=763;DPRA=0;EPP=287.473;EPPR=1375.38;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.998418;PAO=0;PQA=0;PQR=0;PRO=0;QA=5162;QR=24840;RO=632;RPL=0;RPP=287.473;RPPR=1375.38;RPR=131;RUN=1;SAF=131;SAP=287.473;SAR=0;SRF=632;SRP=1375.38;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:99:89,10:89:3485:10:391:-5.74193,0,-283.903 0/1:130:115,15:115:4499:15:580:-13.4006,0,-365.728 0/0:90:87,3:87:3420:3:118:0,-16.0911,-296.861 0/0:155:146,9:146:5761:9:362:0,-13.7157,-485.37 0/1:123:93,30:93:3664:30:1195:-70.8027,0,-292.772 0/1:166:102,64:102:4011:64:2516:-176.615,0,-311.023 dDocent_Contig_4942 34 . T C 23338.5 . AB=0.789644;ABP=678.507;AC=3;AF=0.25;AN=12;AO=732;CIGAR=1X;DP=1181;DPB=1181;DPRA=3.64961;EPP=1592.53;EPPR=978.001;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=29111;QR=16777;RO=449;RPL=0;RPP=1592.53;RPPR=978.001;RPR=732;RUN=1;SAF=732;SAP=1592.53;SAR=0;SRF=449;SRP=978.001;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:933:0:0:0,-7.52575,-84.2805 0/0:96:96,0:96:3589:0:0:0,-28.8989,-323.137 0/0:133:133,0:133:5032:0:0:0,-40.037,-452.893 0/1:128:78,50:78:2894:50:2033:-144.616,0,-222.104 0/1:406:68,338:68:2466:338:13445:-1086.81,0,-99.934 0/1:393:49,344:49:1863:344:13633:-1107.64,0,-49.6076 dDocent_Contig_4943 98 . N A 1240.76 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=41;CIGAR=1X;DP=41;DPB=41;DPRA=0;EPP=92.0407;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1352;QR=0;RO=0;RPL=41;RPP=92.0407;RPPR=0;RPR=0;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:3:0,3:0:0:3:102:-9.5166,-0.90309,0 1/1:1:0,1:0:0:1:10:-0.999996,-0.30103,0 1/1:1:0,1:0:0:1:19:-1.89997,-0.30103,0 1/1:33:0,33:0:0:33:1120:-101.105,-9.93399,0 1/1:2:0,2:0:0:2:66:-6.26818,-0.60206,0 dDocent_Contig_4944 17 . G A 86.7388 . AB=0.162162;ABP=39.6906;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=276;DPB=276;DPRA=1.0838;EPP=20.3821;EPPR=584.965;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.625;PAIREDR=0.772388;PAO=0;PQA=0;PQR=0;PRO=0;QA=311;QR=10573;RO=268;RPL=0;RPP=20.3821;RPPR=584.965;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=268;SRP=584.965;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1397:0:0:0,-10.536,-125.979 0/0:60:58,2:58:2277:2:78:0,-10.659,-197.697 0/1:37:31,6:31:1235:6:233:-10.1968,0,-100.28 0/0:35:35,0:35:1366:0:0:0,-10.536,-123.2 0/0:49:49,0:49:1945:0:0:0,-14.7505,-175.25 0/0:60:60,0:60:2353:0:0:0,-18.0618,-211.924 dDocent_Contig_4945 8 . T C 71542.2 . AB=0.51537;ABP=12.9564;AC=6;AF=0.5;AN=12;AO=2498;CIGAR=1X;DP=4847;DPB=4847;DPRA=0;EPP=5427.35;EPPR=5099.46;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=95883;QR=90087;RO=2347;RPL=0;RPP=5427.35;RPPR=5099.46;RPR=2498;RUN=1;SAF=2498;SAP=5427.35;SAR=0;SRF=2347;SRP=5099.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:652:233,419:233:8951:419:16102:-1252.11,0,-609.045 0/1:901:454,447:454:17372:447:17159:-1272.2,0,-1291.37 0/1:586:246,340:246:9432:340:13060:-998.409,0,-672.168 0/1:1028:436,591:436:16730:591:22643:-1727.05,0,-1195.31 0/1:745:486,258:486:18707:258:9878:-664.327,0,-1458.27 0/1:935:492,443:492:18895:443:17041:-1251.34,0,-1418.08 dDocent_Contig_4946 19 . T C 614.692 . AB=0.1125;ABP=837.724;AC=3;AF=0.25;AN=12;AO=73;CIGAR=1X;DP=866;DPB=866;DPRA=1.54245;EPP=161.528;EPPR=1722.82;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2912;QR=31917;RO=792;RPL=0;RPP=161.528;RPPR=1722.82;RPR=73;RUN=1;SAF=73;SAP=161.528;SAR=0;SRF=792;SRP=1722.82;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:208:179,29:179:7203:29:1146:-40.8035,0,-585.275 0/1:220:198,21:198:7980:21:834:-9.03097,0,-651.405 0/1:212:190,22:190:7665:22:893:-16.8562,0,-625.604 0/0:170:170,0:170:6858:0:0:0,-51.1751,-616.878 0/0:14:13,1:13:523:1:39:0,-0.317855,-43.5184 0/0:42:42,0:42:1688:0:0:0,-12.6433,-152.142 dDocent_Contig_4947 209 . N G 156.112 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=154;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:40:-3.99568,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:38:-3.79727,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:76:-7.21481,-0.60206,0 dDocent_Contig_4948 38 . T A 91.0429 . AB=0.157895;ABP=41.6397;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=202;DPB=202;DPRA=0.88785;EPP=22.5536;EPPR=422.104;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.888889;PAIREDR=0.777202;PAO=0;PQA=0;PQR=0;PRO=0;QA=346;QR=7626;RO=193;RPL=0;RPP=22.5536;RPPR=422.104;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=193;SRP=422.104;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:19,1:19:750:1:40:0,-2.02492,-63.8242 0/0:38:38,0:38:1529:0:0:0,-11.4391,-137.85 0/0:31:31,0:31:1236:0:0:0,-9.33193,-111.512 0/0:38:38,0:38:1485:0:0:0,-11.4391,-133.899 0/1:38:32,6:32:1244:6:241:-10.6272,0,-100.794 0/0:37:35,2:35:1382:2:65:0,-4.96837,-118.47 dDocent_Contig_4949 18 . T A 4878.13 . AB=0.194444;ABP=1054;AC=2;AF=0.166667;AN=12;AO=434;CIGAR=1X;DP=4527;DPB=4527;DPRA=0.809365;EPP=945.429;EPPR=8871.3;GTI=0;LEN=1;MEANALT=1.6;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.995392;PAIREDR=0.998531;PAO=0;PQA=0;PQR=0;PRO=0;QA=16784;QR=144673;RO=4084;RPL=0;RPP=945.429;RPPR=8871.3;RPR=434;RUN=1;SAF=434;SAP=945.429;SAR=0;SRF=4084;SRP=8871.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:481:372,109:372:13027:109:4239:-236.716,0,-1027.35 0/0:824:755,69:755:26554:69:2661:0,-8.42401,-2149.26 0/0:443:420,22:420:15062:22:879:0,-54.0418,-1275.65 0/1:815:670,143:670:23707:143:5549:-254.318,0,-1887.74 0/0:897:896,0:896:31511:0:0:0,-269.723,-2834.55 0/0:1067:971,91:971:34812:91:3456:0,-8.76528,-2820.36 dDocent_Contig_4950 92 . A G 92139.7 . AB=0.0321873;ABP=5200.06;AC=0;AF=0;AN=12;AO=88;CIGAR=9M1X4M;DP=4232;DPB=4521.21;DPRA=0.891134;EPP=194.1;EPPR=1542.58;GTI=0;LEN=1;MEANALT=9.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2983;QR=24091;RO=709;RPL=88;RPP=194.1;RPPR=1542.58;RPR=0;RUN=1;SAF=88;SAP=194.1;SAR=0;SRF=709;SRP=1542.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:516:136,366,7:136:4663:366,7:12336,239:-958.79,0,-268.453,-980.335,-359.234,-1356.81 0|0:700:138,511,45:138:4663:511,45:17226,1505:-1354.45,0,-224.176,-1274.14,-256.146,-1638.58 0|0:689:115,544,18:115:3920:544,18:18477,623:-1464.03,0,-154.351,-1448.02,-267.478,-1760.66 0|0:829:172,633,18:172:5826:633,18:21394,616:-1682.47,0,-281.836,-1684.25,-422.385,-2151.21 0|0:767:25,732,0:25:836:732,0:24777,0:-2153.97,-152.657,0,-2161.49,-220.354,-2229.18 0|0:731:123,602,0:123:4183:602,0:20315,0:-1609.48,0,-158.11,-1646.51,-339.33,-1985.82 dDocent_Contig_4951 76 . T C 1591.65 . AB=0.172859;ABP=578.415;AC=3;AF=0.25;AN=12;AO=113;CIGAR=1X;DP=980;DPB=980;DPRA=1.62121;EPP=248.387;EPPR=1879.16;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.991898;PAO=0;PQA=0;PQR=0;PRO=0;QA=4093;QR=30935;RO=864;RPL=113;RPP=248.387;RPPR=1879.16;RPR=0;RUN=1;SAF=113;SAP=248.387;SAR=0;SRF=864;SRP=1879.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:48,0:48:1695:0:0:0,-14.4494,-152.837 0/0:130:123,6:123:4275:6:210:0,-19.8205,-365.713 0/1:83:63,19:63:2294:19:697:-38.2925,0,-181.953 0/0:183:183,0:183:6586:0:0:0,-55.0885,-592.782 0/1:146:107,39:107:3831:39:1429:-84.9535,0,-301.012 0/1:390:340,49:340:12254:49:1757:-41.1406,0,-985.364 dDocent_Contig_4952 96 . C G 398.956 . AB=0.298507;ABP=26.6372;AC=2;AF=0.166667;AN=12;AO=21;CIGAR=1X;DP=164;DPB=164;DPRA=1.05;EPP=48.6112;EPPR=313.531;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.951049;PAO=0;PQA=0;PQR=0;PRO=0;QA=729;QR=4956;RO=143;RPL=21;RPP=48.6112;RPPR=313.531;RPR=0;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=143;SRP=313.531;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:13:13,0:13:452:0:0:0,-3.91339,-41.0123 0/0:17:16,1:16:536:1:34:0,-1.7186,-45.1586 0/0:26:26,0:26:906:0:0:0,-7.82678,-81.8571 0/0:41:41,0:41:1430:0:0:0,-12.3422,-128.999 0/1:27:24,3:24:832:3:105:-1.66835,0,-67.0705 0/1:40:23,17:23:800:17:590:-41.386,0,-60.2791 dDocent_Contig_4953 25 . A G 4147.39 . AB=0.149165;ABP=1988.33;AC=3;AF=0.25;AN=12;AO=357;CIGAR=1X;DP=4321;DPB=4321;DPRA=0.788787;EPP=778.226;EPPR=8606.38;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.999495;PAO=0;PQA=0;PQR=0;PRO=0;QA=14033;QR=157550;RO=3962;RPL=0;RPP=778.226;RPPR=8606.38;RPR=357;RUN=1;SAF=357;SAP=778.226;SAR=0;SRF=3962;SRP=8606.38;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:506:467,39:467:18596:39:1536:0,-13.8373,-1533.66 0/1:661:519,142:519:20639:142:5616:-306.297,0,-1656.82 0/1:382:335,47:335:13405:47:1813:-48.3781,0,-1090.44 0/1:814:725,88:725:28830:88:3447:-65.286,0,-2347.12 0/0:874:873,0:873:34615:0:0:0,-262.799,-3112.12 0/0:1084:1043,41:1043:41465:41:1621:0,-180.198,-3581.88 dDocent_Contig_4954 34 . C A 45.88 . AB=0.139535;ABP=51.5402;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=284;DPB=284;DPRA=1.36667;EPP=7.94546;EPPR=3.97275;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.545455;PAIREDR=0.692308;PAO=0;PQA=0;PQR=0;PRO=0;QA=364;QR=9858;RO=273;RPL=0;RPP=26.8965;RPPR=595.822;RPR=11;RUN=1;SAF=3;SAP=7.94546;SAR=8;SRF=131;SRP=3.97275;SRR=142;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:34,0:34:1190:0:0:0,-10.235,-107.374 0/0:54:51,3:51:1795:3:80:0,-8.79151,-154.336 0/1:43:37,6:37:1371:6:208:-6.11087,0,-110.714 0/0:67:65,2:65:2407:2:76:0,-12.9555,-209.61 0/0:28:28,0:28:1036:0:0:0,-8.42884,-93.5339 0/0:58:58,0:58:2059:0:0:0,-17.4597,-185.535 dDocent_Contig_4955 33 . T C 4242.12 . AB=0.481728;ABP=3.88322;AC=3;AF=0.25;AN=12;AO=165;CIGAR=1X;DP=699;DPB=699;DPRA=1.09444;EPP=361.303;EPPR=1160.41;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6562;QR=21203;RO=533;RPL=0;RPP=361.303;RPPR=1160.41;RPR=165;RUN=1;SAF=165;SAP=361.303;SAR=0;SRF=533;SRP=1160.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:62:53,9:53:2078:9:345:-12.7416,0,-168.54 0/0:87:83,4:83:3323:4:163:0,-11.1312,-284.048 0/0:203:187,16:187:7429:16:626:0,-4.44439,-611.556 0/0:108:108,0:108:4303:0:0:0,-32.5112,-387.226 0/1:128:56,71:56:2245:71:2839:-216.976,0,-163.587 0/1:111:46,65:46:1825:65:2589:-199.716,0,-131.049 dDocent_Contig_4956 28 . T A 33810.3 . AB=0.67528;ABP=312.831;AC=7;AF=0.583333;AN=12;AO=1051;CIGAR=1X;DP=1437;DPB=1437;DPRA=0;EPP=2285.23;EPPR=830.341;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=41934;QR=15046;RO=381;RPL=0;RPP=2285.23;RPPR=830.341;RPR=1051;RUN=1;SAF=1051;SAP=2285.23;SAR=0;SRF=381;SRP=830.341;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:211:94,116:94:3715:116:4626:-352.797,0,-270.914 0/1:336:103,230:103:4038:230:9113:-718.983,0,-262.743 0/1:129:53,76:53:2104:76:3078:-238.252,0,-150.707 0/1:298:85,212:85:3371:212:8499:-674.843,0,-213.865 0/1:187:37,150:37:1455:150:5963:-480.174,0,-74.8979 1/1:276:9,267:9:363:267:10655:-925.2,-50.05,0 dDocent_Contig_4958 77 . C T 5341.93 . AB=0.404472;ABP=42.0085;AC=6;AF=0.5;AN=12;AO=199;CIGAR=1X;DP=492;DPB=492;DPRA=0;EPP=7.82246;EPPR=33.4704;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.562814;PAIREDR=0.60274;PAO=0;PQA=0;PQR=0;PRO=0;QA=7688;QR=11261;RO=292;RPL=199;RPP=435.133;RPPR=628.424;RPR=0;RUN=1;SAF=110;SAP=7.82246;SAR=89;SRF=177;SRP=31.5964;SRR=115;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:58:41,17:41:1583:17:673:-43.4428,0,-125.267 0/1:90:61,29:61:2337:29:1111:-73.1831,0,-183.417 0/1:66:44,22:44:1713:22:848:-56.7625,0,-134.541 0/1:100:41,58:41:1565:58:2263:-173.729,0,-110.963 0/1:65:44,21:44:1672:21:770:-50.0391,0,-131.161 0/1:113:61,52:61:2391:52:2023:-148.259,0,-181.352 dDocent_Contig_4959 43 . A G 1591.76 . AB=0.552083;ABP=5.27225;AC=2;AF=0.166667;AN=12;AO=53;CIGAR=1X;DP=264;DPB=264;DPRA=1.14286;EPP=118.098;EPPR=461.191;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2119;QR=8115;RO=211;RPL=0;RPP=118.098;RPPR=461.191;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=211;SRP=461.191;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:351:0:0:0,-2.70927,-31.9488 0/0:31:31,0:31:1193:0:0:0,-9.33193,-107.652 0/0:82:82,0:82:3176:0:0:0,-24.6845,-285.928 0/0:46:46,0:46:1723:0:0:0,-13.8474,-155.299 0/1:18:14,4:14:535:4:161:-9.45694,0,-43.0704 0/1:78:29,49:29:1137:49:1958:-152.941,0,-79.1393 dDocent_Contig_4960 57 . A G 105.243 . AB=0.100529;ABP=264.977;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1X;DP=558;DPB=558;DPRA=0.823529;EPP=52.9542;EPPR=1162.58;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.869565;PAIREDR=0.925094;PAO=0;PQA=0;PQR=0;PRO=0;QA=928;QR=21094;RO=534;RPL=23;RPP=52.9542;RPPR=1162.58;RPR=0;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=534;SRP=1162.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:63:59,4:59:2283:4:164:0,-3.81499,-190.49 0/0:96:96,0:96:3849:0:0:0,-28.8989,-346.408 0/1:73:67,6:67:2656:6:246:-0.54493,0,-217.194 0/1:116:103,13:103:4058:13:518:-12.0447,0,-330.294 0/0:76:75,0:75:2968:0:0:0,-22.5772,-266.816 0/0:134:134,0:134:5280:0:0:0,-40.338,-475.07 dDocent_Contig_4961 98 . N C 5425.65 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=179;CIGAR=1X;DP=180;DPB=180;DPRA=0;EPP=391.704;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.96648;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6004;QR=0;RO=0;RPL=179;RPP=391.704;RPPR=0;RPR=0;RUN=1;SAF=179;SAP=391.704;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:21:0,21:0:0:21:709:-64.1216,-6.32163,0 1/1:22:0,22:0:0:22:719:-65.01,-6.62266,0 1/1:27:0,27:0:0:27:935:-84.4601,-8.12781,0 1/1:45:0,45:0:0:45:1538:-138.705,-13.5464,0 1/1:33:0,32:0:0:32:1002:-90.0992,-9.63296,0 1/1:32:0,32:0:0:32:1101:-99.3912,-9.63296,0 dDocent_Contig_4965 31 . T A 152826 . AB=0.797664;ABP=2243.33;AC=9;AF=0.75;AN=12;AO=4847;CIGAR=1X2M1X4M;DP=5733;DPB=5733;DPRA=0;EPP=10528.1;EPPR=1533.9;GTI=0;LEN=1;MEANALT=10.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.999381;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=186360;QR=26747;RO=705;RPL=0;RPP=10528.1;RPPR=1533.9;RPR=4847;RUN=1;SAF=4847;SAP=10528.1;SAR=0;SRF=705;SRP=1533.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:836:40,0,790:40:1493:0,790:0,30305:-2590.84,-2602.88,-2725.11,-115.531,-237.814,0 0|1:1037:135,7,867:135:5172:7,867:277,33308:-2693.5,-2711.34,-3133.69,0,-401.67,-163.475 1|1:669:34,43,569:34:1294:43,569:1670,21769:-1841.15,-1714.17,-1807.36,-65.153,-34.0648,0 1|1:1317:105,1,1166:105:4027:1,1166:31,44875:-3673.07,-3702.19,-4032.41,-20.4638,-348.513,0 0|1:935:167,0,747:167:6315:0,747:0,28744:-2309.62,-2359.89,-2877.53,0,-517.703,-292.834 0|1:939:224,0,708:224:8446:0,708:0,27359:-2179.66,-2247.09,-2939.21,0,-692.221,-479.092 dDocent_Contig_4966 1 . N G 66.4848 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=70;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_4967 110 . A G 427.898 . AB=0.157895;ABP=273.416;AC=5;AF=0.416667;AN=12;AO=42;CIGAR=1X;DP=295;DPB=295;DPRA=1.83448;EPP=94.2121;EPPR=552.393;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.928571;PAIREDR=0.920949;PAO=0;PQA=0;PQR=0;PRO=0;QA=1449;QR=8793;RO=253;RPL=0;RPP=94.2121;RPPR=552.393;RPR=42;RUN=1;SAF=0;SAP=94.2121;SAR=42;SRF=0;SRP=552.393;SRR=253;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:46:40,6:40:1395:6:210:-5.39508,0,-112.001 0/1:50:42,8:42:1449:8:269:-9.4859,0,-115.652 0/1:52:43,9:43:1475:9:315:-13.0352,0,-117.389 0/1:59:49,10:49:1701:10:348:-13.8953,0,-135.615 0/0:29:29,0:29:1028:0:0:0,-8.72987,-92.8343 0/1:59:50,9:50:1745:9:307:-10.2002,0,-139.569 dDocent_Contig_4968 98 . N C 418.909 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=15;CIGAR=1X;DP=15;DPB=15;DPRA=0;EPP=35.5824;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=441;QR=0;RO=0;RPL=15;RPP=35.5824;RPPR=0;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:25:-2.49986,-0.30103,0 1/1:4:0,4:0:0:4:122:-11.2814,-1.20412,0 1/1:4:0,4:0:0:4:105:-9.7099,-1.20412,0 1/1:4:0,4:0:0:4:132:-12.2064,-1.20412,0 1/1:2:0,2:0:0:2:57:-5.41422,-0.60206,0 dDocent_Contig_4969 98 . N G 9826.71 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=322;CIGAR=1X;DP=323;DPB=323;DPRA=0;EPP=702.224;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=4.33681e-19;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=10895;QR=0;RO=0;RPL=322;RPP=702.224;RPPR=0;RPR=0;RUN=1;SAF=322;SAP=702.224;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:10:0,10:0:0:10:342:-31.1109,-3.0103,0 1/1:4:0,4:0:0:4:134:-12.3909,-1.20412,0 1/1:9:0,9:0:0:9:300:-27.3233,-2.70927,0 1/1:4:0,3:0:0:3:103:-9.26925,-0.90309,0 1/1:140:0,140:0:0:140:4753:-427.957,-42.1442,0 1/1:156:0,156:0:0:156:5263:-473.842,-46.9607,0 dDocent_Contig_4970 13 . A T 150.78 . AB=0.119403;ABP=171.607;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=473;DPB=473;DPRA=1.9764;EPP=37.7539;EPPR=993.202;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=629;QR=18090;RO=456;RPL=0;RPP=37.7539;RPPR=993.202;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=456;SRP=993.202;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:71:70,0:70:2791:0:0:0,-21.0721,-251.043 0/0:69:69,0:69:2746:0:0:0,-20.7711,-247.262 0/0:78:78,0:78:3138:0:0:0,-23.4803,-282.478 0/0:113:113,0:113:4434:0:0:0,-34.0164,-399.006 0/1:134:118,16:118:4659:16:629:-16.6008,0,-378.91 0/0:8:8,0:8:322:0:0:0,-2.40824,-29.3478 dDocent_Contig_4972 9 . C A 30881.5 . AB=0.294199;ABP=1607.35;AC=6;AF=0.5;AN=12;AO=1283;CIGAR=1X;DP=4361;DPB=4361;DPRA=0;EPP=2789.01;EPPR=6682.46;GTI=0;LEN=1;MEANALT=1.33333;MQM=59.9657;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=0.998441;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=49039;QR=118364;RO=3076;RPL=0;RPP=2789.01;RPPR=6682.46;RPR=1283;RUN=1;SAF=1283;SAP=2789.01;SAR=0;SRF=3076;SRP=6682.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:471:367,104:367:14087:104:3931:-212.106,0,-1125.38 0/1:831:600,230:600:23068:230:8772:-538.989,0,-1824.54 0/1:433:330,103:330:12737:103:3969:-226.955,0,-1015.41 0/1:778:585,193:585:22533:193:7406:-432.184,0,-1792.47 0/1:763:540,223:540:20775:223:8512:-536.165,0,-1638.9 0/1:1085:654,430:654:25164:430:16449:-1152.97,0,-1936.77 dDocent_Contig_4973 19 . T C 341.871 . AB=0.117845;ABP=379.757;AC=1;AF=0.0833333;AN=12;AO=87;CIGAR=1X;DP=1929;DPB=1929;DPRA=0.672851;EPP=191.928;EPPR=3994.18;GTI=0;LEN=1;MEANALT=1.8;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992383;PAO=0;PQA=0;PQR=0;PRO=0;QA=3425;QR=62969;RO=1838;RPL=0;RPP=191.928;RPPR=3994.18;RPR=87;RUN=1;SAF=87;SAP=191.928;SAR=0;SRF=1838;SRP=3994.18;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:232:219,12:219:7450:12:450:0,-28.8253,-629.722 0/1:297:260,35:260:8861:35:1382:-35.7099,0,-708.546 0/0:170:165,5:165:5645:5:198:0,-32.9782,-489.961 0/0:315:313,2:313:10816:2:82:0,-87.0448,-965.509 0/0:442:442,0:442:15173:0:0:0,-133.055,-1365.27 0/0:473:439,33:439:15024:33:1313:0,-23.9313,-1233.44 dDocent_Contig_4974 11 . A G 75.9617 . AB=0.0976744;ABP=305.289;AC=1;AF=0.0833333;AN=12;AO=22;CIGAR=1X;DP=2878;DPB=2878;DPRA=0.570791;EPP=50.7827;EPPR=6204.74;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=827;QR=113984;RO=2856;RPL=0;RPP=50.7827;RPPR=6204.74;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=2856;SRP=6204.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:496:496,0:496:19780:0:0:0,-149.311,-1778.54 0/0:639:639,0:639:25455:0:0:0,-192.358,-2288.72 0/0:424:423,1:423:16855:1:10:0,-126.637,-1514.59 0/0:695:695,0:695:27771:0:0:0,-209.216,-2496.86 0/1:215:194,21:194:7767:21:817:-9.11905,0,-633.891 0/0:409:409,0:409:16356:0:0:0,-123.121,-1470.72 dDocent_Contig_4975 132 . T C 1624.13 . AB=0.228637;ABP=556.911;AC=5;AF=0.416667;AN=12;AO=200;CIGAR=1X;DP=933;DPB=933;DPRA=0;EPP=437.305;EPPR=1592.53;GTI=0;LEN=1;MEANALT=1.16667;MQM=26.055;MQMR=54.7391;NS=6;NUMALT=1;ODDS=0;PAIRED=0.01;PAIREDR=0.674863;PAO=0;PQA=0;PQR=0;PRO=0;QA=6918;QR=25103;RO=732;RPL=0;RPP=437.305;RPPR=1592.53;RPR=200;RUN=1;SAF=0;SAP=437.305;SAR=200;SRF=0;SRP=1592.53;SRR=732;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:184:121,63:121:4146:63:2190:-88.8331,0,-315.497 0/1:212:159,53:159:5406:53:1810:-35.6185,0,-403.352 0/1:229:194,34:194:6667:34:1195:-4.66124,0,-516.635 0/1:173:136,37:136:4658:37:1283:-31.2889,0,-366.175 0/1:68:57,11:57:1962:11:368:-11.2329,0,-100.845 0/0:67:65,2:65:2264:2:72:0,-13.6642,-167.884 dDocent_Contig_4976 88 . A T 1099.42 . AB=0.290155;ABP=76.8291;AC=5;AF=0.416667;AN=12;AO=57;CIGAR=1X;DP=212;DPB=212;DPRA=0;EPP=126.784;EPPR=339.589;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1986;QR=5426;RO=155;RPL=57;RPP=126.784;RPPR=339.589;RPR=0;RUN=1;SAF=57;SAP=126.784;SAR=0;SRF=155;SRP=339.589;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:18,1:18:604:1:35:0,-2.22094,-51.1786 0/1:31:19,12:19:657:12:414:-28.2591,0,-50.122 0/1:49:38,11:38:1341:11:384:-20.1441,0,-106.24 0/1:32:28,4:28:995:4:144:-3.68066,0,-80.2322 0/1:38:18,20:18:633:20:706:-52.4264,0,-45.8586 0/1:43:34,9:34:1196:9:303:-14.6521,0,-95.0009 dDocent_Contig_4977 19 . A T 394.112 . AB=0.125333;ABP=460.241;AC=2;AF=0.166667;AN=12;AO=47;CIGAR=1X;DP=713;DPB=713;DPRA=2.21893;EPP=105.07;EPPR=1447.04;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.995489;PAO=0;PQA=0;PQR=0;PRO=0;QA=1721;QR=25758;RO=665;RPL=0;RPP=105.07;RPPR=1447.04;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=665;SRP=1447.04;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:61:61,0:61:2361:0:0:0,-18.3628,-212.671 0/0:87:87,0:87:3358:0:0:0,-26.1896,-302.311 0/0:68:68,0:68:2676:0:0:0,-20.47,-240.969 0/1:194:174,20:174:6657:20:711:-5.90635,0,-540.537 0/0:122:121,0:121:4671:0:0:0,-36.4246,-420.284 0/1:181:154,27:154:6035:27:1010:-36.7267,0,-488.503 dDocent_Contig_4978 105 . N T 59.3625 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=2X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=64;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:64:-5.93517,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_4979 30 . T C 111931 . AB=0.0869565;ABP=5728.9;AC=1;AF=0.0833333;AN=12;AO=341;CIGAR=1X3M1X;DP=4552;DPB=4552;DPRA=0;EPP=743.482;EPPR=1425.32;GTI=0;LEN=1;MEANALT=6.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13309;QR=25422;RO=655;RPL=0;RPP=743.482;RPPR=1425.32;RPR=341;RUN=1;SAF=341;SAP=743.482;SAR=0;SRF=655;SRP=1425.32;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:766:123,65,574:123:4778:65,574:2540,22448:-1808.33,-1636.54,-2009.56,0,-183.776,-219.798 0|0:861:169,99,584:169:6583:99,584:3860,22914:-1833.36,-1566.98,-2078.22,0,-223.789,-365.238 1|0:626:63,95,463:63:2411:95,463:3738,18234:-1590.58,-1302.07,-1471.3,-109.656,0,-168.105 0|0:846:143,68,610:143:5549:68,610:2641,23898:-1921.84,-1747.9,-2183.33,0,-238.922,-272.277 0|0:765:99,9,649:99:3855:9,649:354,25421:-2060.28,-2060.96,-2375.07,0,-287.716,-121.468 0|0:688:58,5,624:58:2246:5,624:176,24358:-1987.92,-1991.05,-2174.04,-3.29075,-173.521,0 dDocent_Contig_4980 27 . C T 44.0528 . AB=0.115385;ABP=103.232;AC=4;AF=0.333333;AN=12;AO=9;CIGAR=1X;DP=110;DPB=110;DPRA=1.21875;EPP=22.5536;EPPR=205.301;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.1782;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.910891;PAO=0;PQA=0;PQR=0;PRO=0;QA=352;QR=4039;RO=101;RPL=0;RPP=22.5536;RPPR=222.329;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=99;SRP=205.301;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:17,2:17:676:2:76:-1.49469,0,-54.907 0/1:21:19,2:19:758:2:81:-1.3641,0,-62.2208 0/1:17:14,3:14:549:3:118:-5.88407,0,-44.5952 0/1:21:19,2:19:757:2:77:-0.987203,0,-62.1107 0/0:13:13,0:13:526:0:0:0,-3.91339,-47.6874 0/0:19:19,0:19:773:0:0:0,-5.71957,-69.8889 dDocent_Contig_4981 43 . C A 691.328 . AB=0.208092;ABP=131.052;AC=5;AF=0.416667;AN=12;AO=36;CIGAR=1X;DP=195;DPB=195;DPRA=1.57273;EPP=81.1833;EPPR=348.274;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993711;PAO=0;PQA=0;PQR=0;PRO=0;QA=1429;QR=6385;RO=159;RPL=0;RPP=81.1833;RPPR=348.274;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=159;SRP=348.274;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:18,5:18:732:5:192:-10.7201,0,-59.2799 0/1:40:31,9:31:1237:9:366:-21.264,0,-99.5623 0/1:22:19,3:19:772:3:120:-4.56465,0,-63.176 0/1:69:57,12:57:2264:12:485:-23.2307,0,-183.147 0/0:22:22,0:22:891:0:0:0,-6.62266,-80.4963 0/1:19:12,7:12:489:7:266:-18.575,0,-38.6415 dDocent_Contig_4982 8 . T G 65443.4 . AB=0.656166;ABP=709.036;AC=6;AF=0.5;AN=12;AO=2187;CIGAR=1X;DP=3333;DPB=3333;DPRA=0;EPP=4752.02;EPPR=2489.35;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.9817;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999127;PAO=0;PQA=0;PQR=0;PRO=0;QA=84037;QR=44031;RO=1145;RPL=0;RPP=4752.02;RPPR=2489.35;RPR=2187;RUN=1;SAF=2187;SAP=4752.02;SAR=0;SRF=1145;SRP=2489.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:343:154,189:154:5906:189:7236:-547.846,0,-428.243 0/1:616:185,431:185:7133:431:16597:-1307.44,0,-456.39 0/1:339:114,225:114:4398:225:8670:-677.971,0,-293.83 0/1:531:219,312:219:8416:312:11980:-917.435,0,-597.35 0/1:756:284,471:284:10941:471:18032:-1394.27,0,-756.586 0/1:748:189,559:189:7237:559:21522:-1710.6,0,-426.01 dDocent_Contig_4983 36 . T A 555.532 . AB=0.252525;ABP=55.674;AC=1;AF=0.0833333;AN=12;AO=31;CIGAR=1X;DP=533;DPB=533;DPRA=0.84596;EPP=70.3259;EPPR=1090.92;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992016;PAO=0;PQA=0;PQR=0;PRO=0;QA=1207;QR=20055;RO=501;RPL=0;RPP=70.3259;RPPR=1090.92;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=501;SRP=1090.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:94:92,2:92:3653:2:82:0,-20.5171,-321.009 0/1:99:74,25:74:3001:25:962:-57.0761,0,-240.361 0/0:142:141,0:141:5625:0:0:0,-42.4452,-505.665 0/0:103:100,3:100:4016:3:123:0,-19.5413,-349.949 0/0:56:56,0:56:2244:0:0:0,-16.8577,-202.12 0/0:39:38,1:38:1516:1:40:0,-7.74449,-132.684 dDocent_Contig_4984 70 . T C 1698.44 . AB=0.126943;ABP=1402.83;AC=2;AF=0.166667;AN=12;AO=155;CIGAR=1X;DP=2118;DPB=2118;DPRA=1.39785;EPP=339.589;EPPR=4265.61;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99134;PAO=0;PQA=0;PQR=0;PRO=0;QA=6102;QR=76984;RO=1963;RPL=155;RPP=339.589;RPPR=4265.61;RPR=0;RUN=1;SAF=155;SAP=339.589;SAR=0;SRF=1963;SRP=4265.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:191:190,1:190:7450:1:39:0,-53.6002,-666.263 0/0:211:204,7:204:8042:7:269:0,-38.9428,-698.825 0/0:272:272,0:272:10597:0:0:0,-81.8802,-953.096 0/0:286:286,0:286:11157:0:0:0,-86.0946,-1003.45 0/1:659:595,64:595:23354:64:2559:-32.0593,0,-1901.6 0/1:499:416,83:416:16384:83:3235:-141.007,0,-1323.12 dDocent_Contig_4985 11 . T C 615.927 . AB=0.343284;ABP=17.3031;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=1X;DP=380;DPB=380;DPRA=1.1405;EPP=57.2971;EPPR=773.883;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.95493;PAO=0;PQA=0;PQR=0;PRO=0;QA=1004;QR=14262;RO=355;RPL=0;RPP=57.2971;RPPR=773.883;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=355;SRP=773.883;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1412:0:0:0,-10.536,-127.327 0/0:71:69,2:69:2771:2:82:0,-13.5935,-241.712 0/0:22:22,0:22:897:0:0:0,-6.62266,-81.0346 0/1:67:44,23:44:1773:23:922:-63.1156,0,-139.616 0/0:74:74,0:74:2969:0:0:0,-22.2762,-267.289 0/0:111:111,0:111:4440:0:0:0,-33.4143,-399.534 dDocent_Contig_4986 16 . T C 77706.4 . AB=0.604918;ABP=403.528;AC=6;AF=0.5;AN=12;AO=2534;CIGAR=1X3M1X;DP=4189;DPB=4189;DPRA=0;EPP=5505.52;EPPR=3564.23;GTI=0;LEN=1;MEANALT=3.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=0.999211;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=100531;QR=65228;RO=1640;RPL=0;RPP=5505.52;RPPR=3564.23;RPR=2534;RUN=1;SAF=2534;SAP=5505.52;SAR=0;SRF=1640;SRP=3564.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:619:202,414:202:8007:414:16479:-1296.12,0,-534.474 0|1:793:243,548:243:9689:548:21749:-1717.24,0,-632.978 0|1:495:211,281:211:8375:281:11157:-854.96,0,-604.842 0|1:696:297,395:297:11813:395:15604:-1194.63,0,-853.772 0|1:811:428,381:428:17014:381:15124:-1116.27,0,-1286.16 0|1:775:259,515:259:10330:515:20418:-1602.64,0,-695.661 dDocent_Contig_4987 11 . T C 13333.9 . AB=0.618513;ABP=89.9941;AC=6;AF=0.5;AN=12;AO=441;CIGAR=1X;DP=713;DPB=713;DPRA=0;EPP=951.963;EPPR=591.479;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.945578;PAIREDR=0.98524;PAO=0;PQA=0;PQR=0;PRO=0;QA=17318;QR=10788;RO=271;RPL=0;RPP=960.63;RPPR=591.479;RPR=441;RUN=1;SAF=440;SAP=951.963;SAR=1;SRF=271;SRP=591.479;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:70:22,48:22:886:48:1883:-148.609,0,-58.9753 0/1:90:45,45:45:1768:45:1760:-131.535,0,-132.242 0/1:114:51,62:51:1995:62:2416:-183.21,0,-145.35 0/1:111:56,55:56:2262:55:2190:-163.863,0,-170.322 0/1:188:54,134:54:2166:134:5244:-415.263,0,-138.518 0/1:140:43,97:43:1711:97:3825:-302.131,0,-112.07 dDocent_Contig_4988 10 . T C 1107.9 . AB=0.146341;ABP=537.51;AC=2;AF=0.166667;AN=12;AO=109;CIGAR=1X;DP=1752;DPB=1752;DPRA=0.598178;EPP=222.648;EPPR=3570.74;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.761468;PAIREDR=0.791844;PAO=0;PQA=0;PQR=0;PRO=0;QA=4377;QR=65382;RO=1643;RPL=0;RPP=239.701;RPPR=3570.74;RPR=109;RUN=1;SAF=107;SAP=222.648;SAR=2;SRF=1643;SRP=3570.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:150:141,9:141:5635:9:364:0,-12.03,-473.827 0/1:230:184,46:184:7293:46:1852:-97.6435,0,-586.793 0/1:262:236,26:236:9434:26:1055:-16.3679,0,-769.59 0/0:356:335,21:335:13356:21:824:0,-32.6894,-1126.59 0/0:439:439,0:439:17428:0:0:0,-132.152,-1567.15 0/0:315:308,7:308:12236:7:282:0,-69.073,-1074.64 dDocent_Contig_4989 98 . N A 470.73 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=15;CIGAR=1X;DP=15;DPB=15;DPRA=0;EPP=35.5824;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=513;QR=0;RO=0;RPL=15;RPP=35.5824;RPPR=0;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:14:0,14:0:0:14:486:-44.0707,-4.21442,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:27:-2.69978,-0.30103,0 dDocent_Contig_4990 1 . N G 70.251 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=74;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:74:-7.02402,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_4991 116 . G T 3922.92 . AB=0.184176;ABP=1338.95;AC=2;AF=0.166667;AN=12;AO=414;CIGAR=1X;DP=4310;DPB=4310;DPRA=0;EPP=902;EPPR=8460.9;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998973;PAO=0;PQA=0;PQR=0;PRO=0;QA=13823;QR=131344;RO=3895;RPL=0;RPP=902;RPPR=8460.9;RPR=414;RUN=1;SAF=0;SAP=902;SAR=414;SRF=0;SRP=8460.9;SRR=3895;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:564:507,57:507:17122:57:1865:0,-1.65661,-1372.65 0/1:751:599,152:599:20239:152:5086:-231.848,0,-1595.13 0/0:532:489,43:489:16473:43:1454:0,-28.9947,-1351.24 0/1:791:659,132:659:22080:132:4462:-163.666,0,-1748.73 0/0:831:801,29:801:27185:29:922:0,-166.662,-2362.85 0/0:841:840,1:840:28245:1:34:0,-249.767,-2538.1 dDocent_Contig_4992 24 . G T 570.559 . AB=0.111853;ABP=786.861;AC=2;AF=0.166667;AN=12;AO=100;CIGAR=1X;DP=2050;DPB=2050;DPRA=0.766996;EPP=220.158;EPPR=4235.21;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.999487;PAO=0;PQA=0;PQR=0;PRO=0;QA=3996;QR=77738;RO=1949;RPL=0;RPP=220.158;RPPR=4235.21;RPR=100;RUN=1;SAF=100;SAP=220.158;SAR=0;SRF=1949;SRP=4235.21;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:198:175,23:175:6997:23:914:-22.9589,0,-569.787 0/1:401:356,44:356:14172:44:1754:-37.3188,0,-1153.66 0/0:189:177,12:177:7007:12:484:0,-12.9848,-586.4 0/0:373:373,0:373:14955:0:0:0,-112.284,-1344.74 0/0:453:432,21:432:17247:21:844:0,-60.0959,-1474.53 0/0:436:436,0:436:17360:0:0:0,-131.249,-1560.98 dDocent_Contig_4993 16 . T C 131.836 . AB=0.107143;ABP=265.758;AC=3;AF=0.25;AN=12;AO=26;CIGAR=1X;DP=497;DPB=497;DPRA=0.655814;EPP=59.4686;EPPR=1025.77;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.753715;PAO=0;PQA=0;PQR=0;PRO=0;QA=1031;QR=18834;RO=471;RPL=0;RPP=59.4686;RPPR=1025.77;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=471;SRP=1025.77;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:49:45,4:45:1816:4:160:-0.0331239,0,-148.896 0/1:89:80,9:80:3162:9:343:-4.42521,0,-257.856 0/1:58:50,8:50:1990:8:323:-11.9792,0,-161.831 0/0:86:81,5:81:3269:5:205:0,-7.05357,-275.421 0/0:74:74,0:74:2978:0:0:0,-22.2762,-268.098 0/0:141:141,0:141:5619:0:0:0,-42.4452,-505.514 dDocent_Contig_4994 13 . G A 41.531 . AB=0.0869565;ABP=582.416;AC=1;AF=0.0833333;AN=12;AO=107;CIGAR=1X;DP=3284;DPB=3284;DPRA=0.697268;EPP=235.358;EPPR=6901.78;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998426;PAO=0;PQA=0;PQR=0;PRO=0;QA=4246;QR=125994;RO=3177;RPL=0;RPP=235.358;RPPR=6901.78;RPR=107;RUN=1;SAF=107;SAP=235.358;SAR=0;SRF=3177;SRP=6901.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:449:437,12:437:17223:12:461:0,-93.3284,-1506.9 0/0:532:520,12:520:20550:12:464:0,-118.044,-1805.7 0/1:391:357,34:357:14256:34:1368:-5.67595,0,-1164.26 0/0:536:503,33:503:19947:33:1303:0,-43.8186,-1676.07 0/0:644:628,16:628:24935:16:650:0,-135.03,-2183.18 0/0:732:732,0:732:29083:0:0:0,-220.354,-2614.89 dDocent_Contig_4995 15 . A G 5827.69 . AB=0.14347;ABP=3088.95;AC=3;AF=0.25;AN=12;AO=472;CIGAR=1X;DP=5960;DPB=5960;DPRA=0.790033;EPP=1027.95;EPPR=11917.9;GTI=0;LEN=1;MEANALT=1.2;MQM=59.9936;MQMR=59.9991;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=18714;QR=218767;RO=5487;RPL=0;RPP=1027.95;RPPR=11917.9;RPR=472;RUN=1;SAF=472;SAP=1027.95;SAR=0;SRF=5487;SRP=11917.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:822:698,123:698:27814:123:4843:-188.216,0,-2253.21 0/1:910:801,109:801:31969:109:4345:-117.059,0,-2600.33 0/0:810:756,54:756:30168:54:2147:0,-50.4263,-2518.96 0/1:1063:894,169:894:35554:169:6700:-282.716,0,-2876.6 0/0:1204:1204,0:1204:48130:0:0:0,-362.44,-4327.06 0/0:1151:1134,17:1134:45132:17:679:0,-285.046,-3996.16 dDocent_Contig_4996 9 . A G 125.74 . AB=0.160714;ABP=59.0033;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=383;DPB=383;DPRA=0.968992;EPP=29.068;EPPR=808.627;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.981132;PAO=0;PQA=0;PQR=0;PRO=0;QA=457;QR=14117;RO=371;RPL=0;RPP=29.068;RPPR=808.627;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=371;SRP=808.627;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:69:66,3:66:2519:3:117:0,-9.86069,-216.002 0/1:56:47,9:47:1796:9:340:-14.0969,0,-145.036 0/0:34:34,0:34:1297:0:0:0,-10.235,-117.021 0/0:80:80,0:80:3030:0:0:0,-24.0824,-272.866 0/0:79:79,0:79:3001:0:0:0,-23.7814,-270.259 0/0:65:65,0:65:2474:0:0:0,-19.5669,-222.866 dDocent_Contig_4997 20 . T A 5736.31 . AB=0.313808;ABP=218.913;AC=2;AF=0.166667;AN=12;AO=237;CIGAR=1X2M1X;DP=1742;DPB=1742;DPRA=1.242;EPP=517.649;EPPR=3264.56;GTI=0;LEN=1;MEANALT=1.75;MQM=59.9705;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999334;PAO=0;PQA=0;PQR=0;PRO=0;QA=9275;QR=59719;RO=1502;RPL=0;RPP=517.649;RPPR=3264.56;RPR=237;RUN=1;SAF=237;SAP=517.649;SAR=0;SRF=1502;SRP=3264.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:245:236,9:236:9354:9:354:0,-41.5303,-809.127 0|0:287:287,0:287:11362:0:0:0,-86.3956,-1021.87 0|0:280:277,3:277:11032:3:119:0,-73.193,-981.082 0|0:213:213,0:213:8477:0:0:0,-64.1194,-762.484 0|1:352:288,64:288:11494:64:2491:-118.396,0,-927.734 0|1:365:201,161:201:8000:161:6311:-458.457,0,-610.265 dDocent_Contig_4998 8 . T G 576.351 . AB=0.126728;ABP=528.246;AC=2;AF=0.166667;AN=12;AO=91;CIGAR=1X;DP=1731;DPB=1731;DPRA=0.928218;EPP=200.614;EPPR=3562.05;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995119;PAO=0;PQA=0;PQR=0;PRO=0;QA=3507;QR=62906;RO=1639;RPL=0;RPP=200.614;RPPR=3562.05;RPR=91;RUN=1;SAF=91;SAP=200.614;SAR=0;SRF=1639;SRP=3562.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:217:187,30:187:7223:30:1155:-38.9263,0,-584.591 0/0:316:297,19:297:11449:19:736:0,-28.5543,-963.37 0/1:217:192,25:192:7382:25:966:-21.9306,0,-598.893 0/0:375:357,17:357:13658:17:650:0,-54.1108,-1169.78 0/0:355:355,0:355:13530:0:0:0,-106.866,-1217.1 0/0:251:251,0:251:9664:0:0:0,-75.5585,-869.43 dDocent_Contig_4999 48 . G A 93.0938 . AB=0.0921348;ABP=646.005;AC=2;AF=0.166667;AN=12;AO=63;CIGAR=1X;DP=1527;DPB=1527;DPRA=0.70807;EPP=139.813;EPPR=3173.37;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993169;PAO=0;PQA=0;PQR=0;PRO=0;QA=2493;QR=57306;RO=1464;RPL=0;RPP=139.813;RPPR=3173.37;RPR=63;RUN=1;SAF=63;SAP=139.813;SAR=0;SRF=1464;SRP=3182.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:238:215,23:215:8366:23:908:-10.3825,0,-680.886 0/0:260:245,15:245:9619:15:597:0,-24.1985,-811.082 0/0:190:183,7:183:7211:7:276:0,-31.9864,-623.461 0/1:207:189,18:189:7454:18:712:-2.09408,0,-608.206 0/0:277:277,0:277:10791:0:0:0,-83.3853,-970.554 0/0:355:355,0:355:13865:0:0:0,-106.866,-1246.89 dDocent_Contig_5000 29 . T A 1372.49 . AB=0.177616;ABP=374.036;AC=2;AF=0.166667;AN=12;AO=73;CIGAR=1X;DP=989;DPB=989;DPRA=1.42215;EPP=161.528;EPPR=1992.08;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2930;QR=36590;RO=916;RPL=0;RPP=161.528;RPPR=1992.08;RPR=73;RUN=1;SAF=73;SAP=161.528;SAR=0;SRF=916;SRP=1992.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:107:107,0:107:4289:0:0:0,-32.2102,-385.962 0/0:108:108,0:108:4335:0:0:0,-32.5112,-390.089 0/0:194:194,0:194:7793:0:0:0,-58.3998,-700.933 0/0:169:169,0:169:6718:0:0:0,-50.8741,-604.314 0/1:187:141,46:141:5618:46:1851:-110.503,0,-449.137 0/1:224:197,27:197:7837:27:1079:-29.9684,0,-637.483 dDocent_Contig_5001 16 . T C 9265.68 . AB=0.1001;ABP=1390.67;AC=0;AF=0;AN=12;AO=100;CIGAR=2X1M;DP=999;DPB=999;DPRA=0;EPP=220.158;EPPR=1064.86;GTI=0;LEN=1;MEANALT=4.66667;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0.94;PAIREDR=0.977505;PAO=0;PQA=0;PQR=0;PRO=0;QA=3988;QR=19365;RO=489;RPL=0;RPP=220.158;RPPR=1064.86;RPR=100;RUN=1;SAF=100;SAP=220.158;SAR=0;SRF=489;SRP=1064.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:148:76,2,7,13,45:76:3020:2,7,13,45:82,277,521,1802:-125.567,-141.676,-389.702,-125.648,-367.507,-372.168,-105.521,-347.38,-331.351,-350.235,0,-241.859,-225.83,-205.703,-235.081 0|0:228:114,8,0,36,68:114:4509:8,0,36,68:324,0,1421,2743:-191.793,-199.393,-568.047,-226.11,-570.455,-597.172,-109.196,-453.539,-480.256,-469.419,0,-344.347,-371.063,-254.147,-350.593 0|0:144:79,7,0,10,43:79:3109:7,0,10,43:281,0,396,1742:-119.868,-120.496,-374.125,-143.649,-376.232,-399.385,-111.058,-343.64,-366.793,-363.783,0,-232.584,-255.737,-223.145,-242.793 0|0:222:133,11,4,25,42:133:5277:11,4,25,42:445,161,1005,1694:-99.5974,-102.943,-534.008,-126.365,-524.05,-559.537,-56.814,-454.498,-477.92,-483.663,0,-397.684,-421.106,-351.554,-421.732 0|0:110:33,7,6,8,56:33:1312:7,6,8,56:276,235,323,2222:-172.962,-160.189,-266.093,-163.574,-248.879,-269.78,-156.268,-241.574,-244.959,-261.872,0,-85.3053,-88.6908,-81.3845,-91.1545 0|0:147:54,7,0,8,74:54:2138:7,0,8,74:283,0,322,2965:-228.004,-220.927,-394.776,-244.259,-396.884,-420.216,-217.721,-370.345,-393.678,-391.269,0,-152.621,-175.954,-149.415,-153.677 dDocent_Contig_5002 85 . G T 60.2941 . AB=0.114504;ABP=172.103;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=423;DPB=423;DPRA=0.89726;EPP=35.5824;EPPR=886.8;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.133333;PAIREDR=0.646192;PAO=0;PQA=0;PQR=0;PRO=0;QA=526;QR=13865;RO=407;RPL=9;RPP=4.31318;RPPR=3.05832;RPR=6;RUN=1;SAF=9;SAP=4.31318;SAR=6;SRF=202;SRP=3.05832;SRR=205;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:49:44,5:44:1470:5:174:-1.25148,0,-117.838 0/0:72:72,0:72:2425:0:0:0,-21.6742,-218.509 0/0:67:67,0:67:2305:0:0:0,-20.169,-207.714 0/1:82:71,10:71:2370:10:352:-7.53956,0,-189.097 0/0:76:76,0:76:2635:0:0:0,-22.8783,-237.403 0/0:77:77,0:77:2660:0:0:0,-23.1793,-239.651 dDocent_Contig_5003 53 . T C 394.656 . AB=0.137778;ABP=259.427;AC=2;AF=0.166667;AN=12;AO=38;CIGAR=1X;DP=630;DPB=630;DPRA=1.09302;EPP=85.5263;EPPR=1282.01;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1496;QR=23640;RO=589;RPL=38;RPP=85.5263;RPPR=1282.01;RPR=0;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=589;SRP=1282.01;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:94:86,8:86:3438:8:325:-1.32282,0,-281.16 0/0:104:96,7:96:3840:7:282:0,-5.66207,-319.831 0/1:131:107,23:107:4303:23:889:-40.9735,0,-347.878 0/0:89:89,0:89:3571:0:0:0,-26.7917,-321.407 0/0:106:106,0:106:4266:0:0:0,-31.9092,-383.882 0/0:106:105,0:105:4222:0:0:0,-31.6081,-379.831 dDocent_Contig_5004 16 . G T 736.886 . AB=0.165354;ABP=250.079;AC=2;AF=0.166667;AN=12;AO=44;CIGAR=1X;DP=489;DPB=489;DPRA=1.87379;EPP=98.5551;EPPR=969.316;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1772;QR=17734;RO=445;RPL=0;RPP=98.5551;RPPR=969.316;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=445;SRP=969.316;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:56:56,0:56:2215:0:0:0,-16.8577,-199.516 0/0:66:65,1:65:2587:1:40:0,-15.8723,-228.967 0/0:47:47,0:47:1890:0:0:0,-14.1484,-170.298 0/0:66:65,1:65:2597:1:41:0,-15.7734,-229.77 0/1:131:120,11:120:4778:11:447:-1.15057,0,-390.479 0/1:123:92,31:92:3667:31:1244:-75.2014,0,-293.025 dDocent_Contig_5005 98 . N T 1683.49 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=56;CIGAR=1X;DP=56;DPB=56;DPRA=0;EPP=124.613;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1845;QR=0;RO=0;RPL=56;RPP=124.613;RPPR=0;RPR=0;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:15:0,15:0:0:15:513:-46.4952,-4.51545,0 1/1:12:0,12:0:0:12:417:-37.8633,-3.61236,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:24:0,24:0:0:24:755:-68.2404,-7.22472,0 1/1:4:0,4:0:0:4:126:-11.652,-1.20412,0 dDocent_Contig_5006 13 . A G 432.336 . AB=0.169811;ABP=253.959;AC=4;AF=0.333333;AN=12;AO=57;CIGAR=3X1M1X;DP=382;DPB=382;DPRA=0;EPP=126.784;EPPR=706.567;GTI=0;LEN=1;MEANALT=1.16667;MQM=41.2632;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.45614;PAIREDR=0.737654;PAO=0;PQA=0;PQR=0;PRO=0;QA=2189;QR=12503;RO=324;RPL=0;RPP=126.784;RPPR=706.567;RPR=57;RUN=1;SAF=57;SAP=126.784;SAR=0;SRF=324;SRP=706.567;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:56:38,18:38:1458:18:694:-37.8681,0,-114.631 0|1:71:62,9:62:2383:9:344:-1.18132,0,-193.295 0|1:61:53,8:53:2074:8:314:-4.42099,0,-168.507 0|1:77:67,10:67:2585:10:382:-6.15441,0,-209.647 0|0:73:66,7:66:2515:7:264:0,-0.969727,-205.538 0|0:44:38,5:38:1488:5:191:0,-0.0271682,-121.084 dDocent_Contig_5007 58 . G T 226.104 . AB=0.571429;ABP=3.63072;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=139;DPB=139;DPRA=0.56;EPP=20.3821;EPPR=287.473;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=311;QR=5207;RO=131;RPL=8;RPP=20.3821;RPPR=287.473;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=131;SRP=287.473;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:957:0:0:0,-7.22472,-86.4326 0/0:26:26,0:26:1034:0:0:0,-7.82678,-93.3533 0/0:37:37,0:37:1500:0:0:0,-11.1381,-135.241 0/0:13:13,0:13:506:0:0:0,-3.91339,-45.8848 0/1:14:6,8:6:240:8:311:-24.1333,0,-17.761 0/0:25:25,0:25:970:0:0:0,-7.52575,-87.598 dDocent_Contig_5008 41 . G C 37374.5 . AB=0.340246;ABP=922.299;AC=6;AF=0.5;AN=12;AO=1411;CIGAR=1X;DP=4147;DPB=4147;DPRA=0;EPP=3066.96;EPPR=5931.13;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=0.998583;PAIREDR=0.999267;PAO=0;PQA=0;PQR=0;PRO=0;QA=55550;QR=106631;RO=2730;RPL=0;RPP=3066.96;RPPR=5931.13;RPR=1411;RUN=1;SAF=1411;SAP=3066.96;SAR=0;SRF=2730;SRP=5931.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:474:332,142:332:12939:142:5550:-356.685,0,-1021.01 0/1:680:549,129:549:21364:129:5066:-251.352,0,-1716.67 0/1:442:322,118:322:12674:118:4648:-285.725,0,-1007.31 0/1:692:541,150:541:21208:150:5872:-319.903,0,-1698.68 0/1:941:420,521:420:16373:521:20512:-1561.25,0,-1189.18 0/1:918:566,351:566:22073:351:13902:-973.765,0,-1708.43 dDocent_Contig_5009 8 . T C 137.222 . AB=0.0929577;ABP=1024.78;AC=1;AF=0.0833333;AN=12;AO=66;CIGAR=1X;DP=3075;DPB=3075;DPRA=1.50106;EPP=146.327;EPPR=6198.27;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=57.3612;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.870968;PAO=0;PQA=0;PQR=0;PRO=0;QA=2542;QR=115277;RO=3007;RPL=0;RPP=146.327;RPPR=6532.63;RPR=66;RUN=1;SAF=66;SAP=146.327;SAR=0;SRF=2968;SRP=6198.27;SRR=39;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:453:453,0:453:17362:0:0:0,-136.367,-1514.89 0/0:511:511,0:511:19546:0:0:0,-153.826,-1719.91 0/0:398:397,0:397:15209:0:0:0,-119.509,-1349.03 0/0:441:440,0:440:16846:0:0:0,-132.453,-1454.49 0/1:710:644,66:644:24662:66:2542:-15.2451,0,-1974.53 0/0:562:562,0:562:21652:0:0:0,-169.179,-1883.54 dDocent_Contig_5010 31 . A C 628.015 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=8;CIGAR=4M1X;DP=626;DPB=617.2;DPRA=0.930168;EPP=20.3821;EPPR=1238.58;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=306;QR=22061;RO=569;RPL=0;RPP=20.3821;RPPR=1238.58;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=569;SRP=1238.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:78:77,1,0:77:2989:1,0:32,0:0,-20.281,-265.947,-23.1793,-266.248,-268.825 0|0:111:102,0,8:102:3961:0,8:0,306:0,-30.7051,-356.158,-5.61388,-331.052,-328.643 0|0:175:166,8,0:166:6426:8,0:282,0:0,-27.0304,-552.478,-49.971,-554.886,-577.832 0|0:105:103,2,0:103:3990:2,0:80,0:0,-24.0166,-351.563,-31.0061,-352.165,-358.755 0|0:85:65,18,0:65:2513:18,0:670,0:-35.2288,0,-200.954,-54.7957,-206.373,-261.199 0|0:72:56,15,0:56:2182:15,0:578,0:-30.7946,0,-175.026,-47.6523,-179.542,-227.002 dDocent_Contig_5011 41 . G C 298.021 . AB=0.1125;ABP=420.367;AC=2;AF=0.166667;AN=12;AO=60;CIGAR=1X;DP=1329;DPB=1329;DPRA=0.721507;EPP=133.299;EPPR=2758.61;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2379;QR=49941;RO=1269;RPL=0;RPP=133.299;RPPR=2758.61;RPR=60;RUN=1;SAF=60;SAP=133.299;SAR=0;SRF=1269;SRP=2758.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:126:112,14:112:4382:14:559:-12.723,0,-356.413 0/0:243:234,9:234:9210:9:341:0,-42.1098,-797.333 0/0:222:207,15:207:8148:15:608:0,-11.7706,-677.841 0/1:194:172,22:172:6727:22:871:-20.3009,0,-546.773 0/0:280:280,0:280:11039:0:0:0,-84.2884,-992.794 0/0:264:264,0:264:10435:0:0:0,-79.4719,-938.509 dDocent_Contig_5012 107 . N T 94.7779 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=91;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:49:-4.65463,-0.60206,0 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5013 9 . A G 10165.3 . AB=0.0858947;ABP=3540.53;AC=1;AF=0.0833333;AN=12;AO=204;CIGAR=2X;DP=2844;DPB=2844;DPRA=0;EPP=445.991;EPPR=4606.53;GTI=0;LEN=1;MEANALT=2.2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.995098;PAIREDR=0.999528;PAO=0;PQA=0;PQR=0;PRO=0;QA=7930;QR=82447;RO=2120;RPL=0;RPP=445.991;RPPR=4606.53;RPR=204;RUN=1;SAF=204;SAP=445.991;SAR=0;SRF=2120;SRP=4606.53;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:475:396,13,65:396:15328:13,65:495,2614:-96.225,-174.834,-1429.99,0,-1218.49,-1239.52 0|0:578:369,52,157:369:14330:52,157:2020,6275:-405.768,-350.87,-1512.65,0,-1011.46,-1130.18 0|0:441:322,57,62:322:12515:57,62:2232,2502:-109.321,-22.7275,-1033.92,0,-844.831,-1009.7 0|1:564:439,67,58:439:17099:67,58:2619,2330:-83.161,0,-1385.15,-23.3128,-1213.32,-1411.18 0|0:469:342,0,105:342:13350:0,105:0,4207:-243.654,-346.607,-1444.03,0,-1097.44,-1065.83 0|0:317:252,15,50:252:9825:15,50:564,2008:-89.6194,-119.281,-922.32,0,-761.374,-792.526 dDocent_Contig_5014 92 . C T 466.253 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=78;CIGAR=1X3M1X;DP=4315;DPB=4315;DPRA=1.07163;EPP=172.385;EPPR=8549.93;GTI=0;LEN=1;MEANALT=6.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.998984;PAO=0;PQA=0;PQR=0;PRO=0;QA=2613;QR=131914;RO=3936;RPL=78;RPP=172.385;RPPR=8549.93;RPR=0;RUN=1;SAF=78;SAP=172.385;SAR=0;SRF=3936;SRP=8549.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:602:518,0,75:518:17256:0,75:0,2516:-47.8472,-203.781,-1600.38,0,-1396.6,-1374.02 0|0:812:708,3,67:708:23624:3,67:104,2247:0,-204.675,-2116.12,-31.1266,-1935.03,-1923.31 0|0:500:467,0,31:467:15779:0,31:0,1028:0,-140.581,-1419.66,-57.1788,-1336.5,-1327.17 0|0:702:634,29,33:634:21336:29,33:989,1114:0,-110.598,-1830.62,-100.558,-1749.06,-1819.38 0|0:924:885,0,33:885:29602:0,33:0,1109:0,-266.412,-2663.33,-176.453,-2573.49,-2563.56 0|0:775:724,46,4:724:24317:46,4:1520,136:0,-95.0014,-2051.06,-206.913,-2053.87,-2175.58 dDocent_Contig_5015 41 . C T 2830.78 . AB=0.177381;ABP=762.416;AC=2;AF=0.166667;AN=12;AO=150;CIGAR=1X;DP=2043;DPB=2043;DPRA=1.23035;EPP=328.731;EPPR=4107.09;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6030;QR=75053;RO=1890;RPL=0;RPP=328.731;RPPR=4107.09;RPR=150;RUN=1;SAF=150;SAP=328.731;SAR=0;SRF=1890;SRP=4107.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:263:263,0:263:10407:0:0:0,-79.1709,-935.988 0/0:287:284,1:284:11276:1:41:0,-82.0552,-1010.12 0/0:360:360,0:360:14275:0:0:0,-108.371,-1283.67 0/0:293:292,0:292:11599:0:0:0,-87.9008,-1043.02 0/1:457:342,115:342:13635:115:4615:-277.682,0,-1088.57 0/1:383:349,34:349:13861:34:1374:-8.61794,0,-1131.17 dDocent_Contig_5016 60 . G T 397.551 . AB=0.183206;ABP=117.203;AC=2;AF=0.166667;AN=12;AO=24;CIGAR=1X;DP=357;DPB=357;DPRA=1.15929;EPP=55.1256;EPPR=726.111;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.416667;PAIREDR=0.54955;PAO=0;PQA=0;PQR=0;PRO=0;QA=908;QR=12691;RO=333;RPL=9;RPP=6.26751;RPPR=15.0675;RPR=15;RUN=1;SAF=9;SAP=6.26751;SAR=15;SRF=188;SRP=15.0675;SRR=145;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:53:53,0:53:2001:0:0:0,-15.9546,-180.316 0/0:67:67,0:67:2589:0:0:0,-20.169,-233.183 0/0:37:37,0:37:1376:0:0:0,-11.1381,-124.113 0/0:69:69,0:69:2657:0:0:0,-20.7711,-239.301 0/1:60:45,15:45:1765:15:567:-33.3059,0,-141.017 0/1:71:62,9:62:2303:9:341:-9.67104,0,-186.103 dDocent_Contig_5017 14 . T A 34.5826 . AB=0.15;ABP=24.2907;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=237;DPB=237;DPRA=0.866142;EPP=16.0391;EPPR=504.62;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=0.818182;PAO=0;PQA=0;PQR=0;PRO=0;QA=234;QR=9291;RO=231;RPL=0;RPP=16.0391;RPPR=504.62;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=231;SRP=504.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:1173:0:0:0,-8.72987,-105.845 0/0:51:51,0:51:2046:0:0:0,-15.3525,-184.324 0/1:20:17,3:17:680:3:118:-4.98098,0,-55.5081 0/0:47:47,0:47:1880:0:0:0,-14.1484,-169.402 0/0:33:31,2:31:1249:2:78:0,-2.53121,-105.276 0/0:57:56,1:56:2263:1:38:0,-13.3614,-200.029 dDocent_Contig_5018 36 . T C 14962.1 . AB=0.662069;ABP=168.417;AC=6;AF=0.5;AN=12;AO=480;CIGAR=1X;DP=725;DPB=725;DPRA=0;EPP=1036.65;EPPR=535.021;GTI=0;LEN=1;MEANALT=1;MQM=59.8708;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.954167;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=19192;QR=9791;RO=245;RPL=0;RPP=1045.32;RPPR=535.021;RPR=480;RUN=1;SAF=479;SAP=1036.65;SAR=1;SRF=245;SRP=535.021;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:85:42,43:42:1673:43:1690:-126.733,0,-125.203 0/1:211:48,163:48:1903:163:6528:-521.755,0,-107.952 0/1:85:17,68:17:676:68:2730:-220.219,0,-35.582 0/1:130:39,91:39:1567:91:3625:-287.141,0,-102.128 0/1:92:40,52:40:1609:52:2062:-158.063,0,-117.346 0/1:122:59,63:59:2363:63:2557:-193.525,0,-176.098 dDocent_Contig_5019 21 . A T 102.482 . AB=0.102473;ABP=391.458;AC=1;AF=0.0833333;AN=12;AO=53;CIGAR=1X;DP=1856;DPB=1856;DPRA=0.624848;EPP=118.098;EPPR=3918.18;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996118;PAO=0;PQA=0;PQR=0;PRO=0;QA=1965;QR=70875;RO=1803;RPL=0;RPP=118.098;RPPR=3918.18;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=1803;SRP=3918.18;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:284:277,7:277:10916:7:254:0,-62.2858,-958.564 0/0:356:344,12:344:13593:12:461:0,-65.3307,-1180.58 0/0:108:103,5:103:4036:5:176:0,-16.3297,-347.056 0/1:283:254,29:254:9963:29:1074:-11.7711,0,-810.909 0/0:410:410,0:410:16165:0:0:0,-123.422,-1453.65 0/0:415:415,0:415:16202:0:0:0,-124.927,-1456.99 dDocent_Contig_5020 53 . A T 15683.4 . AB=0.0829646;ABP=1368.63;AC=0;AF=0;AN=12;AO=75;CIGAR=1X2M1X;DP=1086;DPB=1086;DPRA=0;EPP=165.871;EPPR=997.545;GTI=0;LEN=1;MEANALT=3.2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2864;QR=17752;RO=458;RPL=75;RPP=165.871;RPPR=997.545;RPR=0;RUN=1;SAF=75;SAP=165.871;SAR=0;SRF=458;SRP=997.545;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:143:59,15,65:59:2266:15,65:571,2549:-191.864,-162.797,-344.275,0,-139.179,-166.442 0|0:182:55,0,125:55:2123:0,125:0,4935:-389.547,-406.103,-580.441,0,-174.389,-136.76 0|0:159:79,6,74:79:3024:6,74:238,2910:-215.561,-219.75,-466.061,0,-228.517,-225.833 0|0:157:55,6,93:55:2157:6,93:226,3633:-282.082,-280.123,-455.702,0,-158.882,-149.402 0|0:254:113,21,108:113:4384:21,108:806,4217:-312.604,-280.468,-634.314,0,-294.03,-327.671 0|0:191:97,27,67:97:3798:27,67:1023,2639:-187.907,-133.246,-437.403,0,-228.434,-292.128 dDocent_Contig_5021 7 . A T 537.633 . AB=0.117647;ABP=67.7713;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1M2X;DP=305;DPB=305;DPRA=1.23387;EPP=16.0391;EPPR=574.108;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=54.8403;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.634981;PAO=0;PQA=0;PQR=0;PRO=0;QA=230;QR=9976;RO=263;RPL=0;RPP=16.0391;RPPR=574.108;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=263;SRP=574.108;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:65:53,0,12:53:2035:0,12:0,456:-21.8156,-37.7702,-199.82,0,-162.429,-158.816 0|0:65:50,0,15:50:1908:0,15:0,551:-30.3345,-45.386,-199.714,0,-154.697,-150.182 0|0:45:41,0,3:41:1554:0,3:0,113:0,-12.3422,-134.548,-2.88294,-125.287,-124.384 0|1:51:40,6,5:40:1524:6,5:230,193:-6.835,0,-117.03,-3.04113,-102.999,-120.374 0|0:33:33,0,0:33:1217:0,0:0,0:0,-9.93399,-109.826,-9.93399,-109.826,-109.826 0|0:46:46,0,0:46:1738:0,0:0,0:0,-13.8474,-149.12,-13.8474,-149.12,-149.12 dDocent_Contig_5022 60 . G A 181.76 . AB=0.121212;ABP=290.895;AC=3;AF=0.25;AN=12;AO=32;CIGAR=1X;DP=437;DPB=437;DPRA=0.918831;EPP=72.4974;EPPR=880.285;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5625;PAIREDR=0.54703;PAO=0;PQA=0;PQR=0;PRO=0;QA=1170;QR=14744;RO=404;RPL=19;RPP=5.45321;RPPR=37.4099;RPR=13;RUN=1;SAF=19;SAP=5.45321;SAR=13;SRF=242;SRP=37.4099;SRR=162;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:89:78,11:78:2887:11:401:-9.63606,0,-233.194 0/1:85:75,9:75:2706:9:330:-4.65873,0,-218.34 0/1:57:49,8:49:1781:8:288:-9.10289,0,-143.369 0/0:52:48,4:48:1732:4:151:0,-1.69762,-142.17 0/0:74:74,0:74:2701:0:0:0,-22.2762,-243.258 0/0:80:80,0:80:2937:0:0:0,-24.0824,-264.486 dDocent_Contig_5023 107 . N T 580.583 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=19;CIGAR=1X;DP=19;DPB=19;DPRA=0;EPP=44.2683;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=629;QR=0;RO=0;RPL=0;RPP=44.2683;RPPR=0;RPR=19;RUN=1;SAF=0;SAP=44.2683;SAR=19;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:67:-6.36304,-0.60206,0 1/1:5:0,5:0:0:5:158:-14.5324,-1.50515,0 1/1:12:0,12:0:0:12:404:-36.6854,-3.61236,0 dDocent_Contig_5024 13 . T A 1059.34 . AB=0.151163;ABP=457.505;AC=1;AF=0.0833333;AN=12;AO=182;CIGAR=1X;DP=4831;DPB=4831;DPRA=0.570494;EPP=398.218;EPPR=10096;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999355;PAO=0;PQA=0;PQR=0;PRO=0;QA=7325;QR=186551;RO=4648;RPL=0;RPP=398.218;RPPR=10096;RPR=182;RUN=1;SAF=182;SAP=398.218;SAR=0;SRF=4648;SRP=10096;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:526:485,41:485:19387:41:1647:0,-9.88478,-1594.72 0/0:712:652,59:652:26181:59:2373:0,-0.424097,-2140.16 0/1:430:365,65:365:14696:65:2631:-107.457,0,-1192 0/0:674:661,13:661:26493:13:514:0,-156.289,-2335.32 0/0:1254:1254,0:1254:50406:0:0:0,-377.492,-4531.51 0/0:1235:1231,4:1231:49388:4:160:0,-356.989,-4425.23 dDocent_Contig_5025 1 . N G 208.401 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=4.45795;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0.333333;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=220;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=2;SAP=4.45795;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:139:-12.8527,-1.20412,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5026 107 . N G 428.211 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=13;CIGAR=1X;DP=13;DPB=13;DPRA=0;EPP=31.2394;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=449;QR=0;RO=0;RPL=0;RPP=31.2394;RPPR=0;RPR=13;RUN=1;SAF=0;SAP=31.2394;SAR=13;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:103:-9.60997,-0.90309,0 1/1:3:0,3:0:0:3:103:-9.60997,-0.90309,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:3:0,3:0:0:3:105:-9.79616,-0.90309,0 1/1:2:0,2:0:0:2:68:-6.45788,-0.60206,0 dDocent_Contig_5027 107 . N A 308.095 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=10;CIGAR=1X;DP=10;DPB=10;DPRA=0;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=58.1;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0.9;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=322;QR=0;RO=0;RPL=0;RPP=24.725;RPPR=0;RPR=10;RUN=1;SAF=0;SAP=24.725;SAR=10;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:43:-4.05978,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:4:0,4:0:0:4:140:-12.9449,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:104:-9.70309,-0.90309,0 dDocent_Contig_5028 1 . N G 193.564 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=203;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:40:-3.99568,-0.30103,0 1/1:4:0,4:0:0:4:163:-15.0584,-1.20412,0 dDocent_Contig_5029 16 . G A 135816 . AB=0.509583;ABP=7.75483;AC=6;AF=0.5;AN=12;AO=3031;CIGAR=1X1M1X3M1X;DP=5948;DPB=5948;DPRA=0;EPP=6584.74;EPPR=1247.26;GTI=0;LEN=1;MEANALT=9.66667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.99967;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=119020;QR=22329;RO=573;RPL=0;RPP=6584.74;RPPR=1247.26;RPR=3031;RUN=1;SAF=3031;SAP=6584.74;SAR=0;SRF=573;SRP=1247.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:854:91,446,291,0:91:3534:446,291,0:17514,11297,0:-2050.86,-637.821,-793.931,-1150.07,0,-1352.84,-2078.25,-928.191,-1440.44,-2368.62 1|0:972:65,484,370,12:65:2474:484,370,12:19022,14454,474:-2530.32,-985.325,-1042.53,-1361.67,0,-1453.19,-2510.88,-1149.22,-1525.56,-2710.17 1|0:789:75,371,319,0:75:2964:371,319,0:14594,12358,0:-1949.1,-771.232,-903.465,-956.529,0,-1104.41,-1971.68,-1015.15,-1200.44,-2215.59 1|0:893:179,435,264,9:179:7011:435,264,9:17112,10324,349:-1625.99,-272.296,-717.846,-831.083,0,-1328.11,-1651.2,-820.122,-1378.91,-2224.99 1|0:1231:102,606,194,318:102:3970:606,194,318:23767,7629,12386:-2615.4,-691.655,-835.486,-2018.56,-390.368,-2286.42,-1628.19,0,-1326.9,-1858.72 1|0:1209:61,689,254,164:61:2376:689,254,164:27011,9899,6421:-2821.12,-618.322,-606.189,-2025.89,0,-2144.7,-2311.55,-285.66,-1693.23,-2457.46 dDocent_Contig_5030 19 . C T 187.295 . AB=0.196429;ABP=47.8357;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=153;DPB=153;DPRA=1.46774;EPP=31.2394;EPPR=307.016;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=505;QR=5594;RO=140;RPL=0;RPP=31.2394;RPPR=307.016;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=140;SRP=307.016;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:9,7:9:340:7:259:-18.8371,0,-26.1303 0/0:26:26,0:26:1049:0:0:0,-7.82678,-94.7009 0/0:35:33,2:33:1331:2:82:0,-2.75637,-112.266 0/0:11:11,0:11:430:0:0:0,-3.31133,-39.0467 0/1:40:36,4:36:1444:4:164:-3.1087,0,-118.158 0/0:25:25,0:25:1000:0:0:0,-7.52575,-90.296 dDocent_Contig_5031 62 . G A 179.4 . AB=0.192308;ABP=45.7716;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=6M1X5M;DP=375;DPB=371.75;DPRA=0.679245;EPP=35.5824;EPPR=758.683;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.893678;PAO=0;PQA=0;PQR=0;PRO=0;QA=563;QR=13439;RO=348;RPL=15;RPP=35.5824;RPPR=758.683;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=348;SRP=758.683;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:52:42,0,0,10:42:1589:0,0,10:0,0,383:-19.1618,-31.8051,-162.045,-31.8051,-162.045,-162.045,0,-130.622,-130.622,-127.611 0|0:57:52,0,3,1:52:2017:0,3,1:0,116,41:0,-15.6536,-181.358,-6.13619,-171.83,-170.927,-12.2655,-177.973,-168.445,-177.672 0|0:43:42,0,0,1:42:1629:0,0,1:0,0,41:0,-12.6433,-146.453,-12.6433,-146.453,-146.453,-8.84972,-143.068,-143.068,-142.767 0|0:64:60,0,0,3:60:2332:0,0,3:0,0,98:0,-18.0618,-209.724,-18.0618,-209.724,-209.724,-10.2071,-201.817,-201.817,-200.914 0|0:72:72,0,0,0:72:2775:0,0,0:0,0,0:0,-21.6742,-249.908,-21.6742,-249.908,-249.908,-21.6742,-249.908,-249.908,-249.908 0|0:87:80,6,0,0:80:3097:6,0,0:212,0,0:0,-6.74816,-259.445,-24.0824,-261.251,-278.512,-24.0824,-261.251,-278.512,-278.512 dDocent_Contig_5032 42 . A C 536.003 . AB=0.0963581;ABP=1868.2;AC=2;AF=0.166667;AN=12;AO=201;CIGAR=1X;DP=4286;DPB=4286;DPRA=0.747182;EPP=439.476;EPPR=8866.96;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999755;PAO=0;PQA=0;PQR=0;PRO=0;QA=7927;QR=160887;RO=4082;RPL=0;RPP=439.476;RPPR=8866.96;RPR=201;RUN=1;SAF=201;SAP=439.476;SAR=0;SRF=4082;SRP=8866.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:551:501,49:501:19802:49:1927:-7.72533,0,-1614.72 0/1:767:689,78:689:27122:78:3110:-49.0969,0,-2207.83 0/0:525:494,31:494:19445:31:1194:0,-50.313,-1640.85 0/0:706:664,42:664:26099:42:1688:0,-60.3851,-2194.62 0/0:905:904,0:904:35607:0:0:0,-272.131,-3201.06 0/0:832:830,1:830:32812:1:8:0,-249.596,-2949.27 dDocent_Contig_5033 19 . T A 22724 . AB=0.315994;ABP=834.102;AC=6;AF=0.5;AN=12;AO=893;CIGAR=1X;DP=2826;DPB=2826;DPRA=0;EPP=1942.14;EPPR=4189.61;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0.996641;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=34828;QR=76506;RO=1928;RPL=0;RPP=1942.14;RPPR=4189.61;RPR=893;RUN=1;SAF=893;SAP=1942.14;SAR=0;SRF=1928;SRP=4189.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:398:251,145:251:10011:145:5645:-388.398,0,-780.834 0/1:454:342,112:342:13535:112:4323:-252.408,0,-1080.51 0/1:257:131,126:131:5205:126:4968:-369.675,0,-390.955 0/1:537:346,191:346:13666:191:7465:-509.894,0,-1067.32 0/1:677:530,145:530:21067:145:5717:-310.929,0,-1690.83 0/1:503:328,174:328:13022:174:6710:-452.318,0,-1019.67 dDocent_Contig_5034 21 . G C 608.35 . AB=0.150794;ABP=269.929;AC=2;AF=0.166667;AN=12;AO=49;CIGAR=1X;DP=689;DPB=689;DPRA=0.938843;EPP=109.412;EPPR=1392.75;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.9875;PAO=0;PQA=0;PQR=0;PRO=0;QA=1957;QR=25540;RO=640;RPL=0;RPP=109.412;RPPR=1392.75;RPR=49;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=640;SRP=1392.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:113:111,2:111:4430:2:70:0,-27.3696,-391.992 0/0:121:121,0:121:4840:0:0:0,-36.4246,-435.482 0/0:66:64,2:64:2587:2:80:0,-12.2764,-225.362 0/0:137:130,7:130:5195:7:265:0,-17.0354,-443.197 0/1:132:121,11:121:4770:11:451:-1.20971,0,-389.457 0/1:120:93,27:93:3718:27:1091:-62.3463,0,-298.507 dDocent_Contig_5035 12 . G A 50315.2 . AB=0.425714;ABP=199.487;AC=6;AF=0.5;AN=12;AO=1745;CIGAR=1X;DP=4099;DPB=4099;DPRA=0;EPP=3792.23;EPPR=5114.66;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998726;PAO=0;PQA=0;PQR=0;PRO=0;QA=69795;QR=94034;RO=2354;RPL=0;RPP=3792.23;RPPR=5114.66;RPR=1745;RUN=1;SAF=1745;SAP=3792.23;SAR=0;SRF=2354;SRP=5114.66;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:499:263,236:263:10504:236:9420:-697.007,0,-794.442 0/1:641:383,258:383:15246:258:10267:-730.411,0,-1178.01 0/1:623:451,172:451:18010:172:6893:-432.507,0,-1431.87 0/1:665:320,345:320:12833:345:13832:-1043.64,0,-953.822 0/1:867:533,334:533:21265:334:13402:-944.18,0,-1651.03 0/1:804:404,400:404:16176:400:15981:-1195,0,-1212.5 dDocent_Contig_5036 38 . A C 136.385 . AB=0.123711;ABP=122.307;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=598;DPB=598;DPRA=1.27376;EPP=42.0968;EPPR=1262.46;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.982759;PAO=0;PQA=0;PQR=0;PRO=0;QA=734;QR=22992;RO=580;RPL=0;RPP=42.0968;RPPR=1262.46;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=580;SRP=1262.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:98:96,2:96:3811:2:81:0,-21.8152,-335.315 0/0:140:136,4:136:5374:4:164:0,-26.9943,-468.374 0/1:97:85,12:85:3413:12:489:-15.1614,0,-278.009 0/0:135:135,0:135:5380:0:0:0,-40.639,-484.045 0/0:73:73,0:73:2891:0:0:0,-21.9752,-260.287 0/0:55:55,0:55:2123:0:0:0,-16.5566,-191.255 dDocent_Contig_5037 7 . A T 629.248 . AB=0.16095;ABP=381.437;AC=3;AF=0.25;AN=12;AO=88;CIGAR=1X;DP=759;DPB=759;DPRA=0;EPP=194.1;EPPR=1457.9;GTI=0;LEN=1;MEANALT=1.16667;MQM=42.2614;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.386364;PAIREDR=0.571642;PAO=0;PQA=0;PQR=0;PRO=0;QA=3353;QR=25581;RO=670;RPL=0;RPP=194.1;RPPR=1457.9;RPR=88;RUN=1;SAF=88;SAP=194.1;SAR=0;SRF=670;SRP=1457.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:107:85,22:85:3242:22:830:-35.7999,0,-259.721 0/0:147:141,6:141:5408:6:230:0,-26.3929,-468.849 0/0:98:89,9:89:3417:9:343:0,-0.884535,-279.05 0/0:135:122,12:122:4653:12:454:0,-1.70119,-379.79 0/1:120:104,16:104:3953:16:613:-10.5819,0,-319.748 0/1:152:129,23:129:4908:23:883:-21.7647,0,-395.996 dDocent_Contig_5038 12 . A G 30.8789 . AB=0.0928962;ABP=266.447;AC=2;AF=0.166667;AN=12;AO=27;CIGAR=1X;DP=567;DPB=567;DPRA=1.312;EPP=61.6401;EPPR=1175.61;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1061;QR=21490;RO=540;RPL=0;RPP=61.6401;RPPR=1175.61;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=540;SRP=1175.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:101:92,9:92:3711:9:353:-1.72422,0,-303.584 0/0:87:84,3:84:3280:3:115:0,-15.4672,-284.545 0/1:82:74,8:74:2957:8:321:-4.57366,0,-241.537 0/0:170:166,4:166:6619:4:160:0,-36.3922,-580.644 0/0:52:49,3:49:1922:3:112:0,-5.20984,-162.741 0/0:75:75,0:75:3001:0:0:0,-22.5772,-270.18 dDocent_Contig_5039 91 . G C 123.486 . AB=0.15;ABP=88.132;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=352;DPB=352;DPRA=1.35238;EPP=37.7539;EPPR=732.625;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.645833;PAO=0;PQA=0;PQR=0;PRO=0;QA=557;QR=11775;RO=336;RPL=10;RPP=5.18177;RPPR=6.13825;RPR=6;RUN=1;SAF=10;SAP=5.18177;SAR=6;SRF=179;SRP=6.13825;SRR=157;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1008:0:0:0,-8.42884,-91.035 0/0:62:58,4:58:2014:4:139:0,-5.81117,-168.676 0/0:65:65,0:65:2305:0:0:0,-19.5669,-207.71 0/1:80:68,12:68:2365:12:418:-13.8715,0,-189.015 0/0:50:50,0:50:1772:0:0:0,-15.0515,-159.756 0/0:67:67,0:67:2311:0:0:0,-20.169,-208.244 dDocent_Contig_5040 41 . A C 190.494 . AB=0.110599;ABP=288.814;AC=1;AF=0.0833333;AN=12;AO=36;CIGAR=1X;DP=823;DPB=823;DPRA=1.59389;EPP=81.1833;EPPR=1709.79;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1432;QR=31172;RO=786;RPL=0;RPP=81.1833;RPPR=1709.79;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=786;SRP=1709.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:75:75,0:75:2989:0:0:0,-22.5772,-269.105 0/0:125:125,0:125:4893:0:0:0,-37.6287,-440.29 0/0:142:141,0:141:5585:0:0:0,-42.4452,-502.078 0/0:116:116,0:116:4642:0:0:0,-34.9195,-417.698 0/1:217:193,24:193:7661:24:951:-20.5722,0,-623.801 0/0:148:136,12:136:5402:12:481:0,-0.9107,-442.404 dDocent_Contig_5041 129 . T A 612.928 . AB=0.309278;ABP=33.6572;AC=2;AF=0.166667;AN=12;AO=30;CIGAR=1X;DP=257;DPB=257;DPRA=1.2125;EPP=68.1545;EPPR=495.935;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.92511;PAO=0;PQA=0;PQR=0;PRO=0;QA=1034;QR=7785;RO=227;RPL=0;RPP=68.1545;RPPR=495.935;RPR=30;RUN=1;SAF=0;SAP=68.1545;SAR=30;SRF=0;SRP=495.935;SRR=227;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:904:0:0:0,-8.12781,-81.666 0/0:42:42,0:42:1440:0:0:0,-12.6433,-129.896 0/0:34:34,0:34:1177:0:0:0,-10.235,-106.237 0/0:57:57,0:57:1945:0:0:0,-17.1587,-175.329 0/1:39:24,15:24:833:15:520:-35.389,0,-63.5488 0/1:58:43,15:43:1486:15:514:-29.1257,0,-116.577 dDocent_Contig_5042 16 . T G 2869.89 . AB=0.0560748;ABP=186.165;AC=0;AF=0;AN=12;AO=6;CIGAR=1M1D4M1X10M1X4M;DP=350;DPB=344.045;DPRA=0;EPP=16.0391;EPPR=463.362;GTI=0;LEN=1;MEANALT=3;MQM=44;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.783019;PAO=0;PQA=0;PQR=0;PRO=0;QA=209;QR=8328;RO=212;RPL=0;RPP=16.0391;RPPR=463.362;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=212;SRP=463.362;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:26:15,2,9:15:586:2,9:68,339:-23.134,-22.22,-69.804,0,-42.7944,-45.5152 0|0:66:52,0,14:52:2039:0,14:0,542:-29.2545,-44.908,-212.588,0,-168.068,-163.854 0|0:81:46,4,26:46:1808:4,26:141,1017:-69.801,-72.4556,-219.971,0,-137.561,-140.928 0|0:45:31,0,12:31:1221:0,12:0,445:-27.0793,-36.4112,-136.879,0,-100.478,-96.8657 0|0:75:39,0,29:39:1546:0,29:0,1124:-80.6574,-92.3976,-219.668,0,-127.328,-118.598 0|0:57:29,0,24:29:1128:0,24:0,937:-68.2845,-77.0143,-169.705,0,-92.6926,-85.4679 dDocent_Contig_5043 11 . T C 224.206 . AB=0.107383;ABP=402.007;AC=3;AF=0.25;AN=12;AO=53;CIGAR=1X;DP=1004;DPB=1004;DPRA=0;EPP=118.098;EPPR=2065.91;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0188679;PAIREDR=0.834737;PAO=0;PQA=0;PQR=0;PRO=0;QA=2134;QR=36088;RO=950;RPL=0;RPP=118.098;RPPR=2065.91;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=950;SRP=2065.91;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:93:82,11:82:3101:11:442:-12.1369,0,-251.246 0/1:95:84,11:84:3178:11:446:-11.8981,0,-257.566 0/1:110:100,10:100:3794:10:404:-3.60565,0,-308.442 0/0:170:166,4:166:6284:4:162:0,-36.2084,-550.519 0/0:283:278,4:278:10579:4:151:0,-71.0927,-937.807 0/0:253:240,13:240:9152:13:529:0,-28.2037,-775.418 dDocent_Contig_5044 62 . A G 2832.66 . AB=0.261317;ABP=243.499;AC=5;AF=0.416667;AN=12;AO=127;CIGAR=1X;DP=537;DPB=537;DPRA=1.90588;EPP=278.787;EPPR=893.314;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4859;QR=15209;RO=410;RPL=127;RPP=278.787;RPPR=893.314;RPR=0;RUN=1;SAF=127;SAP=278.787;SAR=0;SRF=410;SRP=893.314;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:40:35,5:35:1288:5:175:-4.04742,0,-104.164 0/1:108:85,23:85:3144:23:858:-45.018,0,-250.624 0/0:51:51,0:51:1892:0:0:0,-15.3525,-170.534 0/1:89:72,17:72:2679:17:657:-32.6709,0,-214.517 0/1:83:48,35:48:1773:35:1345:-96.3342,0,-134.85 0/1:166:119,47:119:4433:47:1824:-114.417,0,-349.096 dDocent_Contig_5045 48 . C G 199.484 . AB=0.171053;ABP=74.4403;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=481;DPB=481;DPRA=0.739691;EPP=13.8677;EPPR=143.986;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.581345;PAO=0;PQA=0;PQR=0;PRO=0;QA=761;QR=17552;RO=461;RPL=0;RPP=46.4397;RPPR=1004.06;RPR=20;RUN=1;SAF=15;SAP=13.8677;SAR=5;SRF=317;SRP=143.986;SRR=144;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:56:53,3:53:2002:3:122:0,-5.48519,-169.014 0/1:76:63,13:63:2404:13:489:-21.4712,0,-193.642 0/0:48:46,2:46:1769:2:82:0,-6.66976,-151.659 0/0:107:105,2:105:3969:2:68:0,-25.7523,-350.809 0/0:85:85,0:85:3240:0:0:0,-25.5875,-291.705 0/0:109:109,0:109:4168:0:0:0,-32.8123,-375.151 dDocent_Contig_5046 7 . A T 1612.53 . AB=0.144009;ABP=958.468;AC=4;AF=0.333333;AN=12;AO=137;CIGAR=1X;DP=1335;DPB=1335;DPRA=0;EPP=300.502;EPPR=2604.43;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5223;QR=45781;RO=1198;RPL=0;RPP=300.502;RPPR=2604.43;RPR=137;RUN=1;SAF=137;SAP=300.502;SAR=0;SRF=1198;SRP=2604.43;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:147:133,14:133:5088:14:530:-3.79096,0,-413.682 0/1:224:187,37:187:7161:37:1406:-59.3903,0,-576.92 0/1:188:153,35:153:5873:35:1342:-64.4741,0,-471.93 0/1:309:270,39:270:10296:39:1484:-40.8178,0,-833.264 0/0:252:245,7:245:9351:7:272:0,-51.0123,-816.458 0/0:215:210,5:210:8012:5:189:0,-47.3456,-703.513 dDocent_Contig_5047 67 . C A 25210.7 . AB=0.847143;ABP=735.715;AC=8;AF=0.666667;AN=12;AO=839;CIGAR=1X;DP=961;DPB=961;DPRA=0;EPP=1824.88;EPPR=267.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997616;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=31017;QR=4542;RO=122;RPL=839;RPP=1824.88;RPPR=267.93;RPR=0;RUN=1;SAF=839;SAP=1824.88;SAR=0;SRF=122;SRP=267.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:126:7,119:7:273:119:4426:-373.475,-12.9923,0 0/1:185:28,157:28:1033:157:5812:-467.384,0,-37.5819 0/1:204:27,177:27:1027:177:6567:-529.56,0,-31.3272 0/1:210:31,179:31:1127:179:6562:-527.322,0,-38.4974 0/1:101:21,80:21:777:80:2926:-233.128,0,-39.8476 1/1:135:8,127:8:305:127:4724:-397.421,-12.8305,0 dDocent_Contig_5048 22 . G T 132.602 . AB=0.142857;ABP=72.8076;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X3M;DP=461;DPB=461;DPRA=0.977564;EPP=42.0968;EPPR=943.258;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.764434;PAO=0;PQA=0;PQR=0;PRO=0;QA=723;QR=16963;RO=433;RPL=0;RPP=42.0968;RPPR=943.258;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=433;SRP=943.258;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:63:51,3,9:51:1999:3,9:120,362:-14.4821,-19.9499,-183.412,0,-154.481,-161.657 0|0:79:73,6,0:73:2862:6,0:235,0:0,-2.26097,-236.189,-21.9752,-237.996,-257.318 0|0:81:78,0,3:78:3050:0,3:0,117:0,-23.4803,-274.214,-13.4732,-264.597,-263.694 0|0:95:91,0,3:91:3544:0,3:0,123:0,-27.3937,-318.645,-17.1743,-308.492,-307.589 0|0:77:77,0,0:77:3017:0,0:0,0:0,-23.1793,-271.648,-23.1793,-271.648,-271.648 0|0:66:63,0,3:63:2491:0,3:0,121:0,-18.9649,-223.946,-8.58778,-213.972,-213.069 dDocent_Contig_5049 137 . G A 2616.11 . AB=0.421525;ABP=14.9388;AC=6;AF=0.5;AN=12;AO=94;CIGAR=1X;DP=223;DPB=223;DPRA=0;EPP=207.129;EPPR=283.13;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.840426;PAIREDR=0.891473;PAO=0;PQA=0;PQR=0;PRO=0;QA=3755;QR=5108;RO=129;RPL=0;RPP=207.129;RPPR=283.13;RPR=94;RUN=1;SAF=0;SAP=207.129;SAR=94;SRF=0;SRP=283.13;SRR=129;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:18:14,4:14:551:4:162:-9.54821,0,-44.5088 0/1:35:27,8:27:1056:8:317:-18.3596,0,-84.7804 0/1:49:31,18:31:1227:18:736:-51.8119,0,-95.9516 0/1:36:20,16:20:806:16:635:-46.6505,0,-62.018 0/1:34:16,18:16:640:18:719:-54.7996,0,-47.697 0/1:51:21,30:21:828:30:1186:-91.6625,0,-59.4786 dDocent_Contig_5050 13 . C T 331.693 . AB=0.150327;ABP=165.502;AC=3;AF=0.25;AN=12;AO=26;CIGAR=1X;DP=269;DPB=269;DPRA=0.640625;EPP=59.4686;EPPR=530.678;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.961538;PAIREDR=0.987654;PAO=0;PQA=0;PQR=0;PRO=0;QA=1046;QR=9629;RO=243;RPL=0;RPP=59.4686;RPPR=530.678;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=243;SRP=530.678;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:19,1:19:768:1:40:0,-2.02492,-65.4453 0/1:48:41,7:41:1636:7:282:-11.3037,0,-133.022 0/1:50:42,8:42:1655:8:324:-14.4773,0,-134.124 0/0:32:30,2:30:1187:2:80:0,-2.04138,-99.5194 0/0:64:64,0:64:2540:0:0:0,-19.2659,-228.742 0/1:55:47,8:47:1843:8:320:-12.6101,0,-149.534 dDocent_Contig_5051 18 . A G 847.984 . AB=0.155125;ABP=375.956;AC=2;AF=0.166667;AN=12;AO=70;CIGAR=1X;DP=1017;DPB=1017;DPRA=0.870526;EPP=155.013;EPPR=2059.39;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995776;PAO=0;PQA=0;PQR=0;PRO=0;QA=2736;QR=37573;RO=947;RPL=0;RPP=155.013;RPPR=2059.39;RPR=70;RUN=1;SAF=70;SAP=155.013;SAR=0;SRF=947;SRP=2059.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:116:110,6:110:4369:6:240:0,-12.9438,-371.182 0/1:177:148,29:148:5832:29:1114:-47.264,0,-471.424 0/0:217:213,4:213:8511:4:156:0,-50.9071,-751.105 0/1:184:157,27:157:6215:27:1065:-40.7563,0,-503.742 0/0:190:190,0:190:7503:0:0:0,-57.1957,-674.919 0/0:133:129,4:129:5143:4:161:0,-25.1621,-447.875 dDocent_Contig_5052 98 . N A 199.34 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=195;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:26:-2.59983,-0.30103,0 1/1:1:0,1:0:0:1:36:-3.59827,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:36:-3.59827,-0.30103,0 1/1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 dDocent_Contig_5053 33 . G A 7868.8 . AB=0.18544;ABP=1880.06;AC=6;AF=0.5;AN=12;AO=405;CIGAR=1X;DP=2184;DPB=2184;DPRA=0;EPP=882.457;EPPR=3861.72;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997531;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=16167;QR=70434;RO=1777;RPL=0;RPP=882.457;RPPR=3861.72;RPR=405;RUN=1;SAF=405;SAP=882.457;SAR=0;SRF=1777;SRP=3861.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:148:121,27:121:4796:27:1079:-52.8448,0,-386.991 0/1:91:67,24:67:2634:24:962:-59.4881,0,-209.794 0/1:74:65,9:65:2565:9:356:-10.1238,0,-208.707 0/1:241:200,41:200:8006:41:1650:-76.1774,0,-647.558 0/1:844:663,180:663:26261:180:7164:-390.257,0,-2107.04 0/1:786:661,124:661:26172:124:4956:-209.211,0,-2116.5 dDocent_Contig_5054 1 . N G 77.8076 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 dDocent_Contig_5055 44 . G T 1365.01 . AB=0.290155;ABP=76.8291;AC=3;AF=0.25;AN=12;AO=56;CIGAR=1X;DP=869;DPB=869;DPRA=0.285503;EPP=124.613;EPPR=1768.42;GTI=0;LEN=1;MEANALT=1;MQM=58.9107;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.99877;PAO=0;PQA=0;PQR=0;PRO=0;QA=2211;QR=32106;RO=813;RPL=0;RPP=124.613;RPPR=1768.42;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=813;SRP=1768.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:25,12:25:997:12:468:-31.3229,0,-78.8911 0/1:70:47,23:47:1840:23:908:-60.9502,0,-144.731 0/0:132:132,0:132:5195:0:0:0,-39.736,-467.414 0/1:86:65,21:65:2540:21:835:-49.4496,0,-202.858 0/0:231:231,0:231:9120:0:0:0,-69.5379,-820.273 0/0:313:313,0:313:12414:0:0:0,-94.2224,-1116.4 dDocent_Contig_5056 203 . T G 3279.72 . AB=0.0240296;ABP=1067.57;AC=0;AF=0;AN=12;AO=13;CIGAR=7M1X1M1X8M1X5M3X1M;DP=752;DPB=656.821;DPRA=0;EPP=31.2394;EPPR=454.677;GTI=0;LEN=1;MEANALT=23.5;MQM=54.2308;MQMR=60;NS=6;NUMALT=8;ODDS=0;PAIRED=1;PAIREDR=1;PAO=14.7917;PQA=465.736;PQR=471.45;PRO=14.9345;QA=441;QR=8113;RO=208;RPL=13;RPP=31.2394;RPPR=454.677;RPR=0;RUN=1;SAF=0;SAP=31.2394;SAR=13;SRF=0;SRP=454.677;SRR=208;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:137:28,0,24,15,4,0,21,0,9:28:1107:0,24,15,4,0,21,0,9:0,939,585,162,0,739,0,362:-68.7828,-77.2117,-168.324,0,-91.1182,-83.8935,-29.1287,-120.244,-43.036,-115.729,-63.8509,-154.964,-77.7577,-106.884,-153.76,-77.2117,-168.324,-91.1182,-120.244,-154.964,-168.324,-55.486,-146.589,-69.3912,-98.514,-133.23,-146.589,-140.268,-77.2117,-168.324,-91.1182,-120.244,-154.964,-168.324,-146.589,-168.324,-47.3737,-138.488,-61.2807,-90.4074,-125.128,-138.488,-116.756,-138.488,-135.779 0|0:201:51,2,39,19,2,0,39,0,19:51:1981:2,39,19,2,0,39,0,19:66,1511,720,72,0,1330,0,744:-108.778,-118.795,-280.979,0,-157.461,-151.056,-65.1065,-222.561,-103.773,-222.176,-118.257,-275.707,-156.922,-222.022,-280.44,-124.13,-281.581,-162.796,-227.896,-281.042,-286.916,-84.1954,-241.63,-122.856,-187.95,-241.092,-246.965,-235.225,-124.13,-281.581,-162.796,-227.896,-281.042,-286.916,-246.965,-286.916,-62.9487,-220.403,-101.616,-166.717,-219.865,-225.738,-185.792,-225.738,-220.019 0|0:137:51,5,21,3,0,0,16,0,7:51:1995:5,21,3,0,0,16,0,7:163,795,121,0,0,550,0,256:-49.8199,-52.018,-214.563,0,-150.908,-157.739,-55.1954,-206.093,-154.085,-218.343,-65.1724,-216.068,-164.061,-219.246,-229.222,-65.1724,-216.068,-164.061,-219.246,-229.222,-229.222,-49.1692,-200.052,-148.049,-203.229,-213.204,-213.204,-208.388,-65.1724,-216.068,-164.061,-219.246,-229.222,-229.222,-213.204,-229.222,-44.2602,-195.159,-143.151,-198.337,-208.312,-208.312,-192.296,-208.312,-206.205 0|0:110:32,1,20,9,0,0,11,0,4:32:1259:1,20,9,0,0,11,0,4:40,785,340,0,0,389,0,154:-54.9403,-61.2775,-164.556,0,-100.291,-97.5664,-36.7049,-136.991,-75.7199,-137.577,-64.5732,-164.857,-103.587,-140.286,-168.152,-64.5732,-164.857,-103.587,-140.286,-168.152,-168.152,-53.1257,-153.4,-92.1353,-128.832,-156.695,-156.695,-153.384,-64.5732,-164.857,-103.587,-140.286,-168.152,-168.152,-156.695,-168.152,-51.9286,-152.213,-90.9429,-127.642,-155.509,-155.509,-144.053,-155.509,-154.304 0|0:93:24,5,13,13,0,5,12,0,1:24:924:5,13,13,0,5,12,0,1:172,478,509,0,194,417,0,38:-34.6385,-28.4603,-102.828,-2.7809,-65.2553,-74.7441,0,-62.4758,-36.7986,-71.9649,-41.8632,-104.333,-78.6575,-75.8782,-117.735,-25.9201,-88.3916,-62.7157,-59.9362,-101.794,-100.289,-29.3842,-91.8467,-66.1741,-63.3942,-105.247,-89.3071,-101.634,-41.8632,-104.333,-78.6575,-75.8782,-117.735,-101.794,-105.247,-117.735,-38.746,-101.216,-75.5405,-72.7612,-114.618,-98.6769,-102.13,-114.618,-114.317 0|0:74:22,0,3,1,6,1,8,5,9:22:847:0,3,1,6,1,8,5,9:0,122,39,231,21,258,200,351:-22.2345,-28.8571,-98.4071,-18.7899,-88.3416,-87.4385,-25.6503,-95.2007,-85.1352,-94.8997,-9.88809,-79.441,-69.3752,-76.2346,-77.6348,-27.2708,-96.8201,-86.7547,-93.6138,-77.8542,-96.5191,-21.0784,-90.6179,-80.5534,-87.4119,-71.6541,-89.0316,-88.2097,-12.376,-81.9289,-71.8631,-78.7225,-62.9623,-80.3421,-74.1414,-80.4238,0,-69.5552,-59.4892,-66.3487,-50.5882,-67.9684,-61.7694,-53.0761,-66.8459 dDocent_Contig_5057 10 . G A 120148 . AB=0.423237;ABP=274.381;AC=12;AF=1;AN=12;AO=2244;CIGAR=1X7M;DP=5302;DPB=5301.75;DPRA=0;EPP=4875.79;EPPR=1440.53;GTI=0;LEN=1;MEANALT=8.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=8.88178e-16;PAIRED=0.999554;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=89447;QR=25251;RO=662;RPL=0;RPP=4875.79;RPPR=1440.53;RPR=2244;RUN=1;SAF=2244;SAP=4875.79;SAR=0;SRF=662;SRP=1440.53;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:694:110,319,243:110:4182:319,243:12468,9690:-1446.88,-454.996,-701.932,-682.042,0,-951.859 1|1:1037:223,332,441:223:8519:332,441:12972,17537:-1744.13,-744.851,-1343.87,-367.448,0,-933.659 1|1:755:83,244,382:83:3200:244,382:9500,15201:-1744.5,-988.758,-1178.08,-517.963,0,-665.743 1|1:1023:129,302,524:129:4906:302,524:11798,20967:-2255.8,-1324.76,-1636.2,-567.524,0,-812.139 1|1:836:30,482,309:30:1145:482,309:18853,12311:-2460.77,-919.787,-868.628,-1456.1,0,-1457.02 1|1:957:87,479,345:87:3299:479,345:18722,13741:-2373.9,-860.951,-987.241,-1268.67,0,-1435.3 dDocent_Contig_5058 60 . T C 77.8811 . AB=0.10625;ABP=218.475;AC=1;AF=0.0833333;AN=12;AO=26;CIGAR=1X;DP=960;DPB=960;DPRA=1.39823;EPP=59.4686;EPPR=2028.99;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.923077;PAIREDR=0.95284;PAO=0;PQA=0;PQR=0;PRO=0;QA=985;QR=35664;RO=933;RPL=26;RPP=59.4686;RPPR=2028.99;RPR=0;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=933;SRP=2028.99;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:127:127,0:127:4890:0:0:0,-38.2308,-440.09 0/0:123:123,0:123:4623:0:0:0,-37.0267,-416.093 0/0:125:125,0:125:4810:0:0:0,-37.6287,-432.899 0/0:190:190,0:190:7274:0:0:0,-57.1957,-654.46 0/1:160:142,17:142:5456:17:636:-9.31099,0,-442.724 0/0:235:226,9:226:8611:9:349:0,-38.9735,-742.876 dDocent_Contig_5060 114 . A G 10225.8 . AB=0.629513;ABP=95.8177;AC=6;AF=0.5;AN=12;AO=401;CIGAR=1X;DP=637;DPB=637;DPRA=0;EPP=873.771;EPPR=513.306;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13597;QR=8057;RO=235;RPL=0;RPP=873.771;RPPR=513.306;RPR=401;RUN=1;SAF=0;SAP=873.771;SAR=401;SRF=0;SRP=513.306;SRR=235;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:99:35,64:35:1211:64:2181:-166.759,0,-79.4939 0/1:99:38,61:38:1267:61:2105:-159.923,0,-84.522 0/1:70:23,46:23:780:46:1563:-120.114,0,-49.662 0/1:110:44,66:44:1508:66:2231:-167.942,0,-102.9 0/1:139:53,86:53:1838:86:2881:-217.691,0,-123.862 0/1:120:42,78:42:1453:78:2636:-201.371,0,-94.9432 dDocent_Contig_5061 38 . T A 2501.12 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=55;CIGAR=4M1X5M;DP=2341;DPB=2311.6;DPRA=0;EPP=122.441;EPPR=4493.62;GTI=0;LEN=1;MEANALT=4.25;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.997582;PAO=0;PQA=0;PQR=0;PRO=0;QA=2177;QR=81375;RO=2068;RPL=0;RPP=122.441;RPPR=4493.62;RPR=55;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=2068;SRP=4493.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:275:270,0,0,3:270:10580:0,0,3:0,0,122:0,-81.2781,-951.25,-81.2781,-951.25,-951.25,-71.2139,-941.186,-941.186,-940.283 0|0:401:379,0,5,13:379:14903:0,5,13:0,194,511:0,-114.09,-1339.91,-98.1496,-1323.97,-1322.47,-72.0514,-1297.88,-1281.94,-1293.97 0|0:400:357,0,0,25:357:14001:0,0,25:0,0,983:0,-107.468,-1258.82,-107.468,-1258.82,-1258.82,-26.6107,-1177.98,-1177.98,-1170.46 0|0:461:440,0,0,14:440:17362:0,0,14:0,0,561:0,-132.453,-1561.01,-132.453,-1561.01,-1561.01,-86.169,-1514.8,-1514.8,-1510.58 0|0:388:269,74,37,0:269:10580:74,37,0:2944,1399,0:-161.434,0,-848.002,-127.747,-755.611,-986.872,-242.411,-870.278,-998.01,-1112.68 0|0:416:353,60,0,0:353:13949:60,0,0:2404,0,0:-91.9002,0,-1129.91,-198.164,-1147.97,-1346.03,-198.164,-1147.97,-1346.03,-1346.03 dDocent_Contig_5063 18 . T C 233.815 . AB=0.0927152;ABP=1308.4;AC=2;AF=0.166667;AN=12;AO=131;CIGAR=1X;DP=3193;DPB=3193;DPRA=1.36072;EPP=287.473;EPPR=6645.54;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=59.2766;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.982674;PAO=0;PQA=0;PQR=0;PRO=0;QA=5182;QR=121629;RO=3059;RPL=0;RPP=287.473;RPPR=6645.54;RPR=131;RUN=1;SAF=131;SAP=287.473;SAR=0;SRF=3059;SRP=6645.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:485:443,42:443:17616:42:1666:-4.15673,0,-1430.7 0/0:725:713,10:713:28380:10:386:0,-182.737,-2504.03 0/1:421:379,42:379:15091:42:1655:-22.4461,0,-1203.02 0/0:704:667,37:667:26563:37:1475:0,-78.93,-2234.1 0/0:470:469,0:469:18624:0:0:0,-141.183,-1664.39 0/0:388:388,0:388:15355:0:0:0,-116.8,-1367.8 dDocent_Contig_5064 12 . A G 1242.44 . AB=0.285714;ABP=72.8076;AC=2;AF=0.166667;AN=12;AO=52;CIGAR=1X;DP=677;DPB=677;DPRA=0.985337;EPP=115.927;EPPR=1360.18;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.9408;PAO=0;PQA=0;PQR=0;PRO=0;QA=2077;QR=24897;RO=625;RPL=0;RPP=115.927;RPPR=1360.18;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=625;SRP=1360.18;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:85:85,0:85:3392:0:0:0,-25.5875,-305.329 0/0:169:169,0:169:6748:0:0:0,-50.8741,-607.031 0/0:87:87,0:87:3462:0:0:0,-26.1896,-311.629 0/0:161:159,2:159:6337:2:82:0,-40.6861,-562.309 0/1:63:45,18:45:1784:18:720:-46.1611,0,-141.807 0/1:112:80,32:80:3174:32:1275:-81.3045,0,-252.022 dDocent_Contig_5065 10 . G A 1720.93 . AB=0.0737463;ABP=538.006;AC=0;AF=0;AN=12;AO=56;CIGAR=1X2M2X1M;DP=927;DPB=927;DPRA=0;EPP=124.613;EPPR=1462.24;GTI=0;LEN=1;MEANALT=6;MQM=59.9464;MQMR=60;NS=6;NUMALT=5;ODDS=1.11022e-16;PAIRED=0.125;PAIREDR=0.952381;PAO=0;PQA=0;PQR=0;PRO=0;QA=2208;QR=26260;RO=672;RPL=0;RPP=124.613;RPPR=1462.24;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=672;SRP=1462.24;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:54:33,3,4,8,5,1:33:1283:3,4,8,5,1:122,162,308,200,40:-15.3436,-15.2126,-119.735,-11.9174,-107.279,-116.139,0,-95.3545,-92.0594,-103.01,-8.80208,-104.163,-100.867,-88.9435,-112.722,-21.9823,-117.343,-114.048,-102.123,-110.932,-127.106 0|0:83:20,11,31,10,3,8:20:779:11,31,10,3,8:431,1232,395,121,321:-95.4027,-65.9852,-126.693,0,-28.5804,-54.6872,-68.921,-97.5019,-31.5161,-129.93,-91.4487,-120.03,-54.0443,-122.966,-154.566,-74.9738,-103.555,-37.5689,-106.491,-129.019,-136.585 0|0:43:29,2,4,5,2,1:29:1142:2,4,5,2,1:80,163,204,81,41:-8.1024,-10.2434,-103.581,-3.38452,-90.7345,-96.1205,0,-87.3501,-80.4916,-92.4351,-10.1533,-97.5033,-90.645,-87.2606,-103.491,-13.4479,-100.798,-93.9402,-90.5558,-100.709,-107.088 0|0:159:92,9,27,5,23,1:92:3587:9,27,5,23,1:350,1071,188,932,27:-60.4662,-59.4004,-351.521,0,-266.071,-286.704,-72.7671,-338.836,-279.437,-366.092,-11.3002,-277.374,-217.975,-290.74,-299.211,-86.0341,-352.102,-292.704,-365.469,-304.007,-380.562 0|0:293:256,14,3,3,7,7:256:10031:14,3,3,7,7:549,121,117,280,271:0,-31.9144,-852.572,-67.0876,-846.813,-891.053,-67.4464,-847.17,-882.339,-891.411,-53.9947,-833.722,-868.891,-869.249,-876.758,-54.8092,-834.534,-869.703,-870.06,-856.612,-877.57 0|0:295:242,17,11,9,14,1:242:9438:17,11,9,14,1:676,446,361,555,10:0,-17.1924,-787.836,-36.067,-756.174,-808.518,-43.1039,-763.209,-782.085,-816.156,-27.1664,-747.271,-766.147,-773.183,-798.712,-72.2559,-792.356,-811.231,-818.267,-802.329,-847.71 dDocent_Contig_5066 8 . T A 61.6564 . AB=0.122807;ABP=73.4498;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=205;DPB=205;DPRA=1.92568;EPP=18.2106;EPPR=432.962;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.714286;PAIREDR=0.646465;PAO=0;PQA=0;PQR=0;PRO=0;QA=272;QR=7570;RO=198;RPL=0;RPP=18.2106;RPPR=432.962;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=198;SRP=432.962;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:32,0:32:1231:0:0:0,-9.63296,-111.085 0/0:37:37,0:37:1424:0:0:0,-11.1381,-128.439 0/0:16:16,0:16:579:0:0:0,-4.81648,-52.434 0/0:39:39,0:39:1505:0:0:0,-11.7402,-135.723 0/0:24:24,0:24:933:0:0:0,-7.22472,-84.286 0/1:57:50,7:50:1898:7:272:-7.68852,0,-153.908 dDocent_Contig_5067 55 . T A 6542.74 . AB=0.227031;ABP=855.377;AC=4;AF=0.333333;AN=12;AO=305;CIGAR=1X;DP=2134;DPB=2134;DPRA=0.897172;EPP=665.309;EPPR=3968.12;GTI=0;LEN=1;MEANALT=1.6;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.990164;PAIREDR=0.997809;PAO=0;PQA=0;PQR=0;PRO=0;QA=11990;QR=71940;RO=1826;RPL=305;RPP=665.309;RPPR=3968.12;RPR=0;RUN=1;SAF=305;SAP=665.309;SAR=0;SRF=1826;SRP=3968.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:330:243,87:243:9566:87:3407:-207.366,0,-761.095 0/1:419:309,110:309:12154:110:4301:-260.949,0,-966.961 0/1:172:147,24:147:5809:24:953:-34.3623,0,-470.922 0/1:396:317,78:317:12523:78:3089:-158.819,0,-1006.94 0/0:389:389,0:389:15379:0:0:0,-117.101,-1383 0/0:428:421,6:421:16509:6:240:0,-106.887,-1462.67 dDocent_Contig_5068 36 . G A 181.173 . AB=0.0982368;ABP=559.613;AC=1;AF=0.0833333;AN=12;AO=50;CIGAR=1X;DP=2898;DPB=2898;DPRA=0.74271;EPP=111.584;EPPR=6183.02;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.98;PAIREDR=0.997189;PAO=0;PQA=0;PQR=0;PRO=0;QA=1977;QR=111032;RO=2846;RPL=0;RPP=111.584;RPPR=6183.02;RPR=50;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=2846;SRP=6183.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:397:358,39:358:13953:39:1540:-19.3392,0,-1135.33 0/0:448:445,3:445:17517:3:119:0,-123.766,-1564.15 0/0:249:243,6:243:9504:6:236:0,-53.3449,-833.226 0/0:554:553,0:553:21529:0:0:0,-166.47,-1935.59 0/0:638:635,2:635:24786:2:82:0,-184.386,-2220.96 0/0:612:612,0:612:23743:0:0:0,-184.23,-2135.04 dDocent_Contig_5069 28 . A T 1077.46 . AB=0.164491;ABP=377.484;AC=2;AF=0.166667;AN=12;AO=98;CIGAR=2X;DP=1110;DPB=1110;DPRA=0;EPP=215.815;EPPR=2194.03;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999009;PAO=0;PQA=0;PQR=0;PRO=0;QA=3910;QR=40218;RO=1009;RPL=0;RPP=215.815;RPPR=2194.03;RPR=98;RUN=1;SAF=98;SAP=215.815;SAR=0;SRF=1009;SRP=2194.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:167:155,12:155:6232:12:484:0,-6.36089,-516.714 0|0:179:171,6:171:6810:6:236:0,-31.9628,-591.024 0|0:187:184,3:184:7326:3:121:0,-45.0124,-647.72 0|0:194:179,14:179:7098:14:561:0,-7.67778,-587.676 0|1:173:146,27:146:5819:27:1077:-45.1413,0,-471.434 0|1:210:174,36:174:6933:36:1431:-65.8269,0,-560.453 dDocent_Contig_5070 1 . N G 146.911 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=7.37776;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=159;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:159:-14.6908,-1.20412,0 dDocent_Contig_5071 22 . G A 1671.04 . AB=0.183838;ABP=432.782;AC=5;AF=0.416667;AN=12;AO=91;CIGAR=1X;DP=545;DPB=545;DPRA=1.98;EPP=200.614;EPPR=988.859;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.87;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.991189;PAO=0;PQA=0;PQR=0;PRO=0;QA=3597;QR=17904;RO=454;RPL=0;RPP=200.614;RPPR=988.859;RPR=91;RUN=1;SAF=91;SAP=200.614;SAR=0;SRF=454;SRP=988.859;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:50,0:50:2000:0:0:0,-15.0515,-179.34 0/1:85:72,13:72:2821:13:518:-21.3784,0,-228.421 0/1:146:126,20:126:4991:20:795:-27.9156,0,-405.123 0/1:73:60,13:60:2374:13:500:-23.3596,0,-190.905 0/1:92:66,26:66:2594:26:1029:-65.2071,0,-205.9 0/1:99:80,19:80:3124:19:755:-38.4655,0,-251.433 dDocent_Contig_5072 107 . N A 281.253 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=298;QR=0;RO=0;RPL=0;RPP=22.5536;RPPR=0;RPR=9;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:11:-1.09999,-0.30103,0 1/1:2:0,2:0:0:2:72:-6.83672,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:6:0,6:0:0:6:215:-19.699,-1.80618,0 dDocent_Contig_5073 12 . G T 1268.29 . AB=0.111357;ABP=1782.01;AC=4;AF=0.333333;AN=12;AO=152;CIGAR=1X;DP=2109;DPB=2109;DPRA=0.981513;EPP=333.074;EPPR=4252.58;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.980263;PAIREDR=0.999489;PAO=0;PQA=0;PQR=0;PRO=0;QA=6031;QR=77871;RO=1957;RPL=0;RPP=333.074;RPPR=4252.58;RPR=152;RUN=1;SAF=152;SAP=333.074;SAR=0;SRF=1957;SRP=4252.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:300:266,34:266:10536:34:1352:-31.6349,0,-857.262 0/1:320:287,33:287:11430:33:1330:-23.6289,0,-931.589 0/1:292:246,46:246:9775:46:1818:-75.934,0,-791.241 0/1:444:406,38:406:16209:38:1514:-2.84316,0,-1323.86 0/0:357:357,0:357:14264:0:0:0,-107.468,-1282.67 0/0:396:395,1:395:15657:1:17:0,-117.508,-1406.23 dDocent_Contig_5074 98 . N T 95.5051 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=99;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:73:-6.81249,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:2:0,1:0:0:1:26:-2.43484,-0.30103,0 dDocent_Contig_5075 76 . T C 213.975 . AB=0.165289;ABP=120.754;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=344;DPB=344;DPRA=1.0852;EPP=46.4397;EPPR=706.567;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.82716;PAO=0;PQA=0;PQR=0;PRO=0;QA=671;QR=11278;RO=324;RPL=10;RPP=3.0103;RPPR=3.03711;RPR=10;RUN=1;SAF=10;SAP=3.0103;SAR=10;SRF=161;SRP=3.03711;SRR=163;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1440:0:0:0,-12.3422,-129.896 0/0:72:72,0:72:2498:0:0:0,-21.6742,-225.075 0/0:45:45,0:45:1586:0:0:0,-13.5463,-143.029 0/0:65:65,0:65:2258:0:0:0,-19.5669,-203.487 0/1:38:32,6:32:1123:6:206:-7.43747,0,-89.939 0/1:83:69,14:69:2373:14:465:-17.1818,0,-188.84 dDocent_Contig_5076 52 . G A 71.9619 . AB=0.151515;ABP=37.8197;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=231;DPB=231;DPRA=0.833333;EPP=13.8677;EPPR=493.763;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.544248;PAO=0;PQA=0;PQR=0;PRO=0;QA=203;QR=9020;RO=226;RPL=5;RPP=13.8677;RPPR=493.763;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=226;SRP=493.763;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:887:0:0:0,-6.62266,-80.1362 0/0:31:31,0:31:1241:0:0:0,-9.33193,-111.961 0/0:29:29,0:29:1163:0:0:0,-8.72987,-104.945 0/0:51:51,0:51:2050:0:0:0,-15.3525,-184.685 0/0:65:65,0:65:2589:0:0:0,-19.5669,-233.142 0/1:33:28,5:28:1090:5:203:-8.71907,0,-88.4533 dDocent_Contig_5077 17 . G T 16490.2 . AB=0.375792;ABP=214.466;AC=2;AF=0.166667;AN=12;AO=706;CIGAR=1X;DP=4190;DPB=4190;DPRA=0;EPP=1536.07;EPPR=7548.88;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999712;PAO=0;PQA=0;PQR=0;PRO=0;QA=28131;QR=138211;RO=3475;RPL=0;RPP=1536.07;RPPR=7548.88;RPR=706;RUN=1;SAF=706;SAP=1536.07;SAR=0;SRF=3475;SRP=7548.88;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:563:530,33:530:20961:33:1275:0,-54.4735,-1769.78 0/0:730:694,27:694:27642:27:1091:0,-118.969,-2386.86 0/0:553:546,7:546:21881:7:281:0,-140.808,-1941.7 0/0:766:720,46:720:28701:46:1829:0,-65.7739,-2415.72 0/1:777:488,289:488:19272:289:11535:-803.447,0,-1499.04 0/1:801:497,304:497:19754:304:12120:-848.79,0,-1535.08 dDocent_Contig_5078 19 . C T 912.967 . AB=0.154791;ABP=424.292;AC=3;AF=0.25;AN=12;AO=73;CIGAR=1X;DP=897;DPB=897;DPRA=0.874251;EPP=161.528;EPPR=1792.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2810;QR=32686;RO=824;RPL=0;RPP=161.528;RPPR=1792.3;RPR=73;RUN=1;SAF=73;SAP=161.528;SAR=0;SRF=824;SRP=1792.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:130:112,18:112:4431:18:681:-22.4877,0,-359.6 0/0:205:197,8:197:7844:8:309:0,-33.5409,-677.372 0/1:113:93,20:93:3731:20:781:-36.5975,0,-301.782 0/1:164:139,25:139:5460:25:961:-37.4334,0,-441.859 0/0:167:167,0:167:6637:0:0:0,-50.272,-597.042 0/0:118:116,2:116:4583:2:78:0,-28.1181,-404.999 dDocent_Contig_5079 10 . C A 63888.7 . AB=0.870278;ABP=2619.38;AC=8;AF=0.666667;AN=12;AO=1912;CIGAR=2X4M;DP=2197;DPB=2197;DPRA=0;EPP=4154.87;EPPR=398.218;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.97751;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=76414;QR=7227;RO=182;RPL=0;RPP=4154.87;RPPR=398.218;RPR=1912;RUN=1;SAF=1912;SAP=4154.87;SAR=0;SRF=182;SRP=398.218;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:267:29,11,227:29:1152:11,227:431,9072:-738.479,-711.77,-803.296,0,-59.404,-26.5079 1|1:343:13,37,291:13:521:37,291:1468,11615:-1030.54,-913.615,-945.401,-77.9118,0,-33.237 0|1:421:44,15,361:44:1756:15,361:599,14455:-1177.52,-1141.42,-1281.53,0,-95.2826,-35.9471 1|1:411:11,36,364:11:438:36,364:1442,14508:-1274.11,-1158.62,-1183.85,-82.7356,0,-9.22589 0|1:407:55,1,351:55:2161:1,351:38,14027:-1138.79,-1152.23,-1329.66,0,-174.629,-72.0841 0|1:348:30,0,318:30:1199:0,318:0,12737:-1040.66,-1049.69,-1148.45,0,-99.1585,-3.43094 dDocent_Contig_5080 16 . C T 2436.41 . AB=0.145146;ABP=1163.47;AC=4;AF=0.333333;AN=12;AO=182;CIGAR=1M1X3M;DP=1640;DPB=1633.6;DPRA=0;EPP=398.218;EPPR=3082.16;GTI=0;LEN=1;MEANALT=2.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.989011;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7354;QR=56485;RO=1418;RPL=0;RPP=398.218;RPPR=3082.16;RPR=182;RUN=1;SAF=182;SAP=398.218;SAR=0;SRF=1418;SRP=3082.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:213:183,5,25:183:7301:5,25:199,1009:-28.0912,-66.7953,-666.555,0,-584.885,-593.745 0|1:326:284,10,31:284:11343:10,31:397,1248:-17.3871,-70.1987,-1001.44,0,-901.591,-924.939 0|1:296:241,6,47:241:9580:6,47:243,1907:-84.7215,-137.233,-924.125,0,-768.661,-774.55 0|1:226:161,12,51:161:6387:12,51:473,2052:-120.664,-130.218,-652.349,0,-486.852,-510.411 0|0:297:287,0,9:287:11442:0,9:0,367:0,-86.3956,-1028.64,-56.1189,-998.357,-995.647 0|0:282:262,0,19:262:10432:0,19:0,771:0,-78.8699,-937.824,-15.2791,-874.238,-868.518 dDocent_Contig_5081 98 . N T 337.57 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=12;CIGAR=1X;DP=12;DPB=12;DPRA=0;EPP=29.068;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=356;QR=0;RO=0;RPL=12;RPP=29.068;RPPR=0;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:63:-5.98364,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:6:0,6:0:0:6:198:-18.1448,-1.80618,0 1/1:3:0,3:0:0:3:88:-8.21187,-0.90309,0 dDocent_Contig_5083 1 . N G 2891.94 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=81;CIGAR=1X;DP=81;DPB=81;DPRA=0;EPP=178.9;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3181;QR=0;RO=0;RPL=0;RPP=178.9;RPPR=0;RPR=81;RUN=1;SAF=81;SAP=178.9;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:17:0,17:0:0:17:661:-59.8219,-5.11751,0 1/1:9:0,9:0:0:9:346:-31.4974,-2.70927,0 1/1:20:0,20:0:0:20:783:-70.7933,-6.0206,0 1/1:9:0,9:0:0:9:351:-31.9472,-2.70927,0 1/1:9:0,9:0:0:9:357:-32.4922,-2.70927,0 1/1:17:0,17:0:0:17:683:-61.797,-5.11751,0 dDocent_Contig_5084 105 . N C 64.5902 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=3X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=68;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 .:.:.:.:.:.:.:. dDocent_Contig_5085 37 . A C 390.294 . AB=0.152941;ABP=180.867;AC=1;AF=0.0833333;AN=12;AO=43;CIGAR=1X;DP=1136;DPB=1136;DPRA=1.18654;EPP=96.3836;EPPR=2372.09;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1647;QR=42842;RO=1091;RPL=0;RPP=96.3836;RPPR=2372.09;RPR=43;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=1091;SRP=2372.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:253:236,17:236:9246:17:631:0,-19.0606,-774.52 0/1:170:144,26:144:5540:26:1016:-40.5523,0,-447.298 0/0:242:242,0:242:9566:0:0:0,-72.8493,-860.385 0/0:113:113,0:113:4446:0:0:0,-34.0164,-400.113 0/0:225:223,0:223:8800:0:0:0,-67.1297,-791.262 0/0:133:133,0:133:5244:0:0:0,-40.037,-471.846 dDocent_Contig_5086 93 . T C 199.765 . AB=0.129707;ABP=287.655;AC=2;AF=0.166667;AN=12;AO=63;CIGAR=1X;DP=768;DPB=768;DPRA=0;EPP=139.813;EPPR=1531.73;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.99858;PAO=0;PQA=0;PQR=0;PRO=0;QA=2147;QR=23395;RO=704;RPL=63;RPP=139.813;RPPR=1531.73;RPR=0;RUN=1;SAF=63;SAP=139.813;SAR=0;SRF=704;SRP=1531.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:106:99,6:99:3250:6:192:0,-14.1281,-275.172 0/1:136:117,19:117:3879:19:640:-16.9758,0,-308.389 0/0:207:189,18:189:6327:18:628:0,-5.46615,-512.725 0/1:103:91,12:91:3035:12:410:-6.22254,0,-242.386 0/0:112:108,4:108:3631:4:139:0,-20.8627,-314.162 0/0:104:100,4:100:3273:4:138:0,-18.5467,-282.043 dDocent_Contig_5087 98 . N A 101.645 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1M1D7M1X;DP=3;DPB=2.9;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=102;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:2:0,2:0:0:2:67:-6.36314,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_5088 9 . A G 95.8493 . AB=0.162791;ABP=45.4803;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=163;DPB=163;DPRA=0.963855;EPP=24.725;EPPR=335.246;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.973856;PAO=0;PQA=0;PQR=0;PRO=0;QA=378;QR=5900;RO=153;RPL=0;RPP=24.725;RPPR=335.246;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=153;SRP=335.246;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:15,5:15:580:5:183:-10.8042,0,-46.5219 0/1:23:21,2:21:813:2:78:-0.479783,0,-66.5719 0/0:11:11,0:11:420:0:0:0,-3.31133,-38.1512 0/0:37:34,3:34:1320:3:117:0,-0.227729,-108.176 0/0:41:41,0:41:1571:0:0:0,-12.3422,-141.658 0/0:31:31,0:31:1196:0:0:0,-9.33193,-107.936 dDocent_Contig_5089 50 . T C 55209.2 . AB=0.849379;ABP=1368.61;AC=8;AF=0.666667;AN=12;AO=1713;CIGAR=1X2M;DP=1957;DPB=1957;DPRA=0;EPP=3722.74;EPPR=445.991;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=66769;QR=7931;RO=204;RPL=1713;RPP=3722.74;RPPR=445.991;RPR=0;RUN=1;SAF=1713;SAP=3722.74;SAR=0;SRF=204;SRP=445.991;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:258:26,0,232:26:988:0,232:0,8906:-723.477,-731.304,-812.308,0,-81.3838,-11.5449 0|1:310:48,0,262:48:1860:0,262:0,10250:-828.61,-843.059,-995.847,0,-153.175,-74.3056 0|1:415:62,10,342:62:2425:10,342:388,13274:-1071.83,-1058.62,-1254.98,0,-167.497,-96.4191 0|1:305:41,5,258:41:1622:5,258:198,10110:-818.963,-815.008,-946.983,0,-117.181,-55.8125 1|1:345:14,19,309:14:530:19,309:705,12101:-1040.35,-986.895,-1024.62,-49.5687,-35.3382,0 1|1:324:13,0,310:13:506:0,310:0,12128:-1044.91,-1048.82,-1090.4,-51.7384,-93.3193,0 dDocent_Contig_5090 42 . T C 41.8311 . AB=0.0979592;ABP=346.98;AC=2;AF=0.166667;AN=12;AO=37;CIGAR=1X;DP=699;DPB=699;DPRA=0;EPP=83.3548;EPPR=1440.53;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.981873;PAO=0;PQA=0;PQR=0;PRO=0;QA=1395;QR=24397;RO=662;RPL=0;RPP=83.3548;RPPR=1440.53;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=662;SRP=1440.53;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:91:88,3:88:3162:3:119:0,-16.2987,-273.653 0/0:157:154,3:154:5750:3:112:0,-36.8164,-507.04 0/0:91:90,1:90:3356:1:40:0,-23.398,-298.188 0/0:115:109,6:109:3989:6:230:0,-13.5558,-338.054 0/1:117:105,12:105:3804:12:443:-4.97497,0,-307.26 0/1:128:116,12:116:4336:12:451:-2.40212,0,-351.788 dDocent_Contig_5091 19 . G A 116862 . AB=0.0500501;ABP=5273.24;AC=1;AF=0.0833333;AN=12;AO=150;CIGAR=1X1M1X;DP=4575;DPB=4574.67;DPRA=0.765322;EPP=328.731;EPPR=2022.48;GTI=0;LEN=1;MEANALT=2.75;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.998925;PAO=0;PQA=0;PQR=0;PRO=0;QA=5920;QR=36847;RO=930;RPL=0;RPP=328.731;RPPR=2022.48;RPR=150;RUN=1;SAF=150;SAP=328.731;SAR=0;SRF=930;SRP=2022.48;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:599:297,0,301:297:11729:0,301:0,12034:-901.751,-991.157,-1956.21,0,-965.047,-874.437 0|0:774:215,28,530:215:8464:28,530:1105,21280:-1688.64,-1662.45,-2350.24,0,-605.309,-536.674 0|0:649:257,8,383:257:10241:8,383:316,15358:-1187.89,-1239.26,-2080.15,0,-817.301,-728.008 0|0:639:126,32,480:126:5032:32,480:1254,19183:-1542.02,-1476.84,-1881.65,0,-311.355,-269.968 1|0:935:27,82,826:27:1067:82,826:3245,33056:-2894,-2635.08,-2698.19,-179.255,0,-18.4024 0|0:979:8,0,970:8:314:0,970:0,39040:-3481.15,-3483.56,-3509.38,-266.192,-291.999,0 dDocent_Contig_5092 98 . N C 301.961 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=10;CIGAR=1X;DP=10;DPB=10;DPRA=0;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=311;QR=0;RO=0;RPL=10;RPP=24.725;RPPR=0;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:125:-11.5596,-1.20412,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:66:-6.26818,-0.60206,0 1/1:2:0,2:0:0:2:66:-6.26831,-0.60206,0 1/1:1:0,1:0:0:1:19:-1.89997,-0.30103,0 dDocent_Contig_5093 10 . C T 1825.35 . AB=0.166667;ABP=495.211;AC=4;AF=0.333333;AN=12;AO=85;CIGAR=1X2M1D2M1X;DP=510;DPB=497.714;DPRA=0;EPP=187.585;EPPR=812.97;GTI=0;LEN=1;MEANALT=3.16667;MQM=57.8824;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.970509;PAO=0;PQA=0;PQR=0;PRO=0;QA=3309;QR=14518;RO=373;RPL=0;RPP=187.585;RPPR=812.97;RPR=85;RUN=1;SAF=85;SAP=187.585;SAR=0;SRF=373;SRP=812.97;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:109:71,31,6:71:2767:31,6:1200,239:-77.1362,0,-218.103,-78.8261,-207.754,-304.441 0|0:107:91,6,10:91:3568:6,10:239,401:-5.64624,-13.3728,-304.973,0,-273.74,-290.398 0|1:61:37,16,6:37:1447:16,6:632,245:-40.8297,0,-114.142,-31.7487,-98.7402,-148.908 0|1:89:64,19,5:64:2477:19,5:727,197:-40.3609,0,-197.775,-43.4151,-187.287,-245.381 0|1:66:51,7,5:51:1978:7,5:272,204:-6.99067,0,-160.405,-5.49914,-145.679,-166.512 0|0:78:59,6,12:59:2281:6,12:239,491:-22.793,-20.8818,-206.419,0,-167.701,-183.758 dDocent_Contig_5094 98 . N C 2718.08 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=92;CIGAR=1X;DP=92;DPB=92;DPRA=0;EPP=202.786;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2990;QR=0;RO=0;RPL=92;RPP=202.786;RPPR=0;RPR=0;RUN=1;SAF=92;SAP=202.786;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 1/1:22:0,22:0:0:22:727:-65.7398,-6.62266,0 1/1:6:0,6:0:0:6:210:-19.2425,-1.80618,0 1/1:55:0,55:0:0:55:1776:-160.111,-16.5567,0 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 1/1:7:0,7:0:0:7:213:-19.4699,-2.10721,0 dDocent_Contig_5095 21 . A T 14929.6 . AB=0.44148;ABP=37.5745;AC=6;AF=0.5;AN=12;AO=513;CIGAR=1X;DP=1162;DPB=1162;DPRA=0;EPP=1116.98;EPPR=1410.12;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.998457;PAO=0;PQA=0;PQR=0;PRO=0;QA=20597;QR=25696;RO=648;RPL=0;RPP=1116.98;RPPR=1410.12;RPR=513;RUN=1;SAF=513;SAP=1116.98;SAR=0;SRF=648;SRP=1410.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:139:55,84:55:2142:84:3354:-260.07,0,-151.12 0/1:204:112,92:112:4467:92:3705:-272.051,0,-340.555 0/1:136:59,76:59:2345:76:3050:-233.665,0,-170.289 0/1:175:91,84:91:3608:84:3374:-251.024,0,-272.077 0/1:270:191,79:191:7524:79:3157:-202.918,0,-595.515 0/1:238:140,98:140:5610:98:3957:-284.458,0,-433.067 dDocent_Contig_5096 19 . A G 70.4158 . AB=0.0921053;ABP=112.841;AC=0;AF=0;AN=12;AO=12;CIGAR=3M1X7M;DP=531;DPB=529;DPRA=1.07826;EPP=29.068;EPPR=1097.43;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.916667;PAIREDR=0.960317;PAO=0;PQA=0;PQR=0;PRO=0;QA=472;QR=19895;RO=504;RPL=0;RPP=29.068;RPPR=1097.43;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=504;SRP=1097.43;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:75:73,2,0:73:2877:2,0:82,0:0,-14.7976,-251.283,-21.9752,-251.885,-258.654 0|0:110:102,1,5:102:4014:1,5:40,188:0,-27.4027,-357.342,-15.2619,-342.246,-344.036 0|0:76:60,8,7:60:2386:8,7:323,284:-8.56441,0,-194.032,-3.20467,-173.019,-197.54 0|0:81:81,0,0:81:3183:0,0:0,0:0,-24.3834,-286.573,-24.3834,-286.573,-286.573 0|0:99:98,0,0:98:3876:0,0:0,0:0,-29.5009,-348.583,-29.5009,-348.583,-348.583 0|0:90:90,0,0:90:3559:0,0:0,0:0,-27.0927,-320.374,-27.0927,-320.374,-320.374 dDocent_Contig_5097 57 . G A 776.446 . AB=0.275;ABP=55.7771;AC=1;AF=0.0833333;AN=12;AO=61;CIGAR=1X;DP=1195;DPB=1195;DPRA=0.886311;EPP=135.47;EPPR=2461.12;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999117;PAO=0;PQA=0;PQR=0;PRO=0;QA=2392;QR=44647;RO=1132;RPL=61;RPP=135.47;RPPR=2461.12;RPR=0;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=1132;SRP=2461.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:186:186,0:186:7332:0:0:0,-55.9916,-659.539 0/0:366:351,14:351:13866:14:565:0,-59.0557,-1195.75 0/0:128:125,3:125:4922:3:119:0,-27.4364,-431.77 0/0:245:244,0:244:9593:0:0:0,-73.4513,-862.396 0/1:120:87,33:87:3444:33:1278:-79.1675,0,-273.881 0/0:150:139,11:139:5490:11:430:0,-6.10351,-454.878 dDocent_Contig_5098 7 . A T 353.141 . AB=0.123028;ABP=394.293;AC=3;AF=0.25;AN=12;AO=39;CIGAR=1X;DP=883;DPB=883;DPRA=0.560071;EPP=87.6977;EPPR=1833.56;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.991696;PAO=0;PQA=0;PQR=0;PRO=0;QA=1499;QR=32215;RO=843;RPL=0;RPP=87.6977;RPPR=1833.56;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=843;SRP=1833.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:118:98,20:98:3715:20:763:-33.4758,0,-298.953 0/0:167:166,0:166:6347:0:0:0,-49.971,-571.06 0/1:68:61,7:61:2350:7:269:-4.10415,0,-191.24 0/1:131:119,12:119:4568:12:467:-2.94743,0,-371.736 0/0:231:231,0:231:8801:0:0:0,-69.5379,-791.852 0/0:168:168,0:168:6434:0:0:0,-50.573,-578.982 dDocent_Contig_5099 25 . G A 20684.2 . AB=0.444997;ABP=45.2913;AC=6;AF=0.5;AN=12;AO=716;CIGAR=1X;DP=1609;DPB=1609;DPRA=0;EPP=1557.78;EPPR=1939.96;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998603;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=28494;QR=35191;RO=892;RPL=0;RPP=1557.78;RPPR=1939.96;RPR=716;RUN=1;SAF=716;SAP=1557.78;SAR=0;SRF=892;SRP=1939.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:216:119,97:119:4764:97:3883:-284.433,0,-363.635 0/1:243:138,105:138:5476:105:4133:-298.814,0,-419.528 0/1:211:110,101:110:4365:101:4011:-297.455,0,-329.294 0/1:272:178,94:178:7038:94:3740:-254.731,0,-551.208 0/1:390:156,233:156:6059:233:9292:-718.404,0,-427.813 0/1:277:191,86:191:7489:86:3435:-225.81,0,-590.306 dDocent_Contig_5100 18 . C T 108.795 . AB=0.155172;ABP=62.913;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=212;DPB=212;DPRA=1.30435;EPP=26.8965;EPPR=439.476;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.545455;PAIREDR=0.78607;PAO=0;PQA=0;PQR=0;PRO=0;QA=419;QR=7959;RO=201;RPL=0;RPP=26.8965;RPPR=439.476;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=201;SRP=439.476;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:18:13,5:13:524:5:188:-11.8655,0,-42.0884 0/0:35:35,0:35:1384:0:0:0,-10.536,-124.812 0/0:24:24,0:24:958:0:0:0,-7.22472,-86.522 0/0:62:60,2:60:2362:2:77:0,-11.3557,-205.429 0/1:40:36,4:36:1406:4:154:-2.19168,0,-114.749 0/0:33:33,0:33:1325:0:0:0,-9.93399,-119.51 dDocent_Contig_5101 16 . G C 132.817 . AB=0.11413;ABP=240.975;AC=2;AF=0.166667;AN=12;AO=32;CIGAR=1X3M1X;DP=495;DPB=495;DPRA=1.23478;EPP=72.4974;EPPR=999.716;GTI=0;LEN=1;MEANALT=1.6;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.90625;PAIREDR=0.888889;PAO=0;PQA=0;PQR=0;PRO=0;QA=1227;QR=18070;RO=459;RPL=0;RPP=72.4974;RPPR=999.716;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=459;SRP=999.716;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:63:60,1:60:2355:1:40:0,-14.7501,-208.164 0|1:105:95,10:95:3791:10:376:-2.57318,0,-309.611 0|0:91:83,7:83:3241:7:275:0,-2.37369,-266.664 0|1:79:68,11:68:2661:11:415:-13.9115,0,-215.861 0|0:69:69,0:69:2704:0:0:0,-20.7711,-243.505 0|0:88:84,3:84:3318:3:121:0,-15.3024,-287.43 dDocent_Contig_5102 11 . A T 2543.93 . AB=0.0253165;ABP=157.625;AC=0;AF=0;AN=12;AO=8;CIGAR=1M1D2X9M2I1M1X7M;DP=834;DPB=860.818;DPRA=1.27143;EPP=20.3821;EPPR=491.592;GTI=0;LEN=1;MEANALT=17.5;MQM=12.5;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=0;PAIREDR=0.995556;PAO=0;PQA=0;PQR=0;PRO=0;QA=100;QR=8808;RO=225;RPL=0;RPP=20.3821;RPPR=491.592;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=225;SRP=491.592;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:70:31,0,0,1,0,3,9,4,7,0:31:1202:0,0,1,0,3,9,4,7,0:0,0,15,0,98,104,96,119,0:0,-9.33193,-108.169,-9.33193,-108.169,-108.169,-8.54939,-107.387,-107.387,-107.086,-9.33193,-108.169,-108.169,-107.387,-108.169,-2.13779,-100.983,-100.983,-100.201,-100.983,-100.08,-5.00517,-103.84,-103.84,-103.059,-103.84,-96.6555,-101.131,-2.97394,-101.817,-101.817,-101.036,-101.817,-94.6317,-97.4912,-100.613,-2.60826,-101.45,-101.45,-100.668,-101.45,-94.2648,-97.1274,-95.1002,-99.3428,-9.33193,-108.169,-108.169,-107.387,-108.169,-100.983,-103.84,-101.817,-101.45,-108.169 0|0:99:50,1,6,3,1,1,4,1,7,0:50:1958:1,6,3,1,1,4,1,7,0:10,80,42,10,20,54,18,119,0:0,-14.7061,-175.501,-11.2318,-171.981,-170.52,-12.9697,-173.72,-170.245,-173.162,-14.7061,-175.456,-171.981,-173.72,-175.501,-13.8222,-174.573,-171.098,-172.837,-174.573,-174.618,-12.4523,-173.202,-169.728,-171.466,-173.202,-172.319,-172.344,-14.0014,-174.752,-171.277,-173.016,-174.752,-173.869,-172.498,-174.797,-8.32804,-169.08,-165.607,-167.345,-169.08,-168.197,-166.827,-168.376,-167.318,-15.0515,-175.802,-172.327,-174.065,-175.802,-174.919,-173.548,-175.098,-169.426,-176.147 0|0:79:31,6,2,8,0,6,3,2,1,9:31:1213:6,2,8,0,6,3,2,1,9:100,20,132,0,142,34,81,17,345:-18.8631,-22.5908,-120.584,-27.5053,-121.7,-126.701,-20.8106,-115.008,-119.92,-118.201,-28.195,-122.39,-127.303,-120.609,-127.994,-18.8198,-113.021,-117.933,-111.241,-118.623,-116.817,-26.8079,-121.003,-125.915,-119.223,-126.605,-117.236,-125.702,-21.5079,-115.708,-120.621,-113.927,-121.311,-111.941,-119.923,-120.709,-27.2348,-121.43,-126.343,-119.65,-127.033,-117.663,-125.645,-120.351,-126.732,0,-94.2202,-99.1332,-92.4401,-99.8234,-90.4526,-98.4357,-93.1405,-98.8634,-97.1142 0|0:89:49,2,0,1,0,2,6,0,10,7:49:1939:2,0,1,0,2,6,0,10,7:20,0,10,0,50,58,0,170,280:-8.1104,-22.1715,-181.259,-22.8609,-181.861,-182.552,-22.5161,-181.516,-182.206,-181.905,-22.8609,-181.861,-182.552,-182.206,-182.552,-19.4912,-178.494,-179.185,-178.84,-179.185,-178.583,-20.9471,-179.942,-180.632,-180.287,-180.632,-177.266,-178.826,-22.8609,-181.861,-182.552,-182.206,-182.552,-179.185,-180.632,-182.552,-13.2618,-172.264,-172.953,-172.609,-172.953,-169.588,-171.038,-172.953,-169.943,0,-159.034,-159.724,-159.379,-159.724,-156.358,-157.806,-159.724,-150.127,-157.617 0|0:190:30,0,0,0,109,0,1,0,0,0:30:1170:0,0,0,109,0,1,0,0,0:0,0,0,1625,0,13,0,0,0:-75.5009,-84.5318,-180.734,-84.5318,-180.734,-180.734,-84.5318,-180.734,-180.734,-180.734,0,-96.2137,-96.2137,-96.2137,-63.4014,-84.5318,-180.734,-180.734,-180.734,-96.2137,-180.734,-83.9243,-180.126,-180.126,-180.126,-95.6083,-180.126,-179.825,-84.5318,-180.734,-180.734,-180.734,-96.2137,-180.734,-180.126,-180.734,-84.5318,-180.734,-180.734,-180.734,-96.2137,-180.734,-180.126,-180.734,-180.734,-84.5318,-180.734,-180.734,-180.734,-96.2137,-180.734,-180.126,-180.734,-180.734,-180.734 0|0:307:34,0,0,2,218,5,5,0,9,5:34:1326:0,0,2,218,5,5,0,9,5:0,0,58,3251,82,58,0,153,161:-159.141,-169.376,-278.395,-169.376,-278.395,-278.395,-165.298,-274.317,-274.317,-273.715,0,-109.059,-109.059,-104.983,-43.4347,-164.823,-273.843,-273.843,-269.766,-104.516,-272.338,-166.933,-275.952,-275.952,-271.875,-106.627,-271.401,-274.447,-169.376,-278.395,-278.395,-274.317,-109.059,-273.843,-275.952,-278.395,-160.718,-269.738,-269.738,-265.661,-100.417,-265.186,-267.295,-269.738,-267.028,-156.665,-265.685,-265.685,-261.608,-96.35,-261.133,-263.243,-265.685,-257.028,-264.18 dDocent_Contig_5103 83 . G A 2838.88 . AB=0.463602;ABP=6.01375;AC=4;AF=0.333333;AN=12;AO=137;CIGAR=1X;DP=473;DPB=473;DPRA=0;EPP=300.502;EPPR=732.625;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.810219;PAIREDR=0.821429;PAO=0;PQA=0;PQR=0;PRO=0;QA=4634;QR=11328;RO=336;RPL=68;RPP=3.02615;RPPR=20.4855;RPR=69;RUN=1;SAF=68;SAP=3.02615;SAR=69;SRF=142;SRP=20.4855;SRR=194;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:42,12:42:1390:12:389:-19.068,0,-109.135 0/1:51:20,31:20:671:31:1053:-79.7246,0,-45.3518 0/1:66:20,46:20:690:46:1551:-120.012,0,-42.5545 0/1:90:58,32:58:1975:32:1101:-72.305,0,-150.934 0/0:114:104,10:104:3497:10:339:0,-3.47951,-284.116 0/0:98:92,6:92:3105:6:201:0,-11.0818,-261.274 dDocent_Contig_5104 49 . T C 262.369 . AB=0.2;ABP=53.8228;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=388;DPB=388;DPRA=0.906367;EPP=39.9253;EPPR=673.491;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=684;QR=14597;RO=370;RPL=0;RPP=39.9253;RPPR=673.491;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=370;SRP=806.455;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:64:64,0:64:2504:0:0:0,-19.2659,-225.507 0/0:85:84,0:84:3320:0:0:0,-25.2865,-298.723 0/0:56:52,4:52:2071:4:162:0,-1.89072,-171.614 0/1:65:52,13:52:2033:13:522:-27.7597,0,-163.595 0/0:41:41,0:41:1631:0:0:0,-12.3422,-147.022 0/0:77:77,0:77:3038:0:0:0,-23.1793,-273.515 dDocent_Contig_5106 22 . A T 3054.36 . AB=0.176407;ABP=843.408;AC=2;AF=0.166667;AN=12;AO=164;CIGAR=1X;DP=2529;DPB=2529;DPRA=1.14686;EPP=359.132;EPPR=5134.2;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6560;QR=93726;RO=2363;RPL=0;RPP=359.132;RPPR=5134.2;RPR=164;RUN=1;SAF=164;SAP=359.132;SAR=0;SRF=2363;SRP=5134.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:311:310,0:310:12281:0:0:0,-93.3193,-1104.33 0/0:427:426,1:426:16893:1:41:0,-124.445,-1514.97 0/0:404:404,0:404:16018:0:0:0,-121.616,-1440.38 0/0:463:462,0:462:18335:0:0:0,-139.076,-1648.36 0/1:441:352,89:352:13953:89:3571:-188.656,0,-1121.99 0/1:483:409,74:409:16246:74:2948:-120.002,0,-1315.49 dDocent_Contig_5107 13 . G A 831.254 . AB=0.15873;ABP=321.665;AC=1;AF=0.0833333;AN=12;AO=69;CIGAR=1X;DP=1448;DPB=1448;DPRA=1.20396;EPP=152.842;EPPR=2997.47;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.986222;PAO=0;PQA=0;PQR=0;PRO=0;QA=2755;QR=55236;RO=1379;RPL=0;RPP=152.842;RPPR=2997.47;RPR=69;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=1379;SRP=2997.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:193:193,0:193:7723:0:0:0,-58.0988,-694.66 0/0:247:241,6:241:9678:6:237:0,-52.6529,-848.689 0/0:182:182,0:182:7317:0:0:0,-54.7875,-658.146 0/0:282:282,0:282:11239:0:0:0,-84.8905,-1010.74 0/0:229:216,13:216:8665:13:526:0,-21.2489,-731.641 0/1:315:265,50:265:10614:50:1992:-84.6483,0,-859.688 dDocent_Contig_5109 17 . C A 2067.22 . AB=0.0912779;ABP=718.358;AC=1;AF=0.0833333;AN=12;AO=49;CIGAR=3M1X;DP=1496;DPB=1431;DPRA=0.849023;EPP=109.412;EPPR=2851.98;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1925;QR=52133;RO=1312;RPL=0;RPP=109.412;RPPR=2851.98;RPR=49;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=1312;SRP=2851.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:216:176,39,0:176:6994:39,0:1522,0:-72.1062,0,-564.036,-125.087,-575.777,-700.872 0|0:259:215,38,3:215:8519:38,3:1493,119:-58.0569,0,-689.709,-112.982,-691.352,-813.235 0|0:313:288,25,0:288:11419:25,0:944,0:0,-8.96864,-941.706,-86.6966,-949.232,-1026.58 0|0:250:243,6,0:243:9655:6,0:213,0:0,-55.8416,-848.885,-73.1503,-850.691,-868.037 0|0:224:213,7,4:213:8460:7,4:280,163:0,-41.0591,-735.382,-50.6694,-724.042,-745.903 0|1:234:177,15,42:177:7086:15,42:590,1643:-81.7804,-86.5325,-665.758,0,-535.211,-571.097 dDocent_Contig_5110 1 . N G 191.38 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=202;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:63:-5.98364,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:139:-12.8527,-1.20412,0 dDocent_Contig_5111 78 . G A 640.052 . AB=0.208589;ABP=123.241;AC=2;AF=0.166667;AN=12;AO=35;CIGAR=1X;DP=798;DPB=798;DPRA=0.965517;EPP=79.0118;EPPR=1657.67;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1293;QR=29182;RO=762;RPL=35;RPP=79.0118;RPPR=1657.67;RPR=0;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=762;SRP=1657.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:55:46,9:46:1739:9:313:-11.9453,0,-140.204 0/1:108:83,25:83:3178:25:972:-55.2817,0,-253.661 0/0:66:66,0:66:2602:0:0:0,-19.868,-234.314 0/0:100:99,0:99:3785:0:0:0,-29.802,-340.678 0/0:229:228,1:228:8760:1:8:0,-68.1359,-787.324 0/0:240:240,0:240:9118:0:0:0,-72.2472,-820.331 dDocent_Contig_5112 22 . G A 45548.7 . AB=0.476744;ABP=18.7661;AC=6;AF=0.5;AN=12;AO=1599;CIGAR=1X;DP=3354;DPB=3354;DPRA=0;EPP=3136.45;EPPR=3671.9;GTI=0;LEN=1;MEANALT=1.33333;MQM=58.2427;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.94434;PAIREDR=0.9749;PAO=0;PQA=0;PQR=0;PRO=0;QA=62856;QR=68070;RO=1753;RPL=0;RPP=3475.19;RPPR=3809.6;RPR=1599;RUN=1;SAF=1559;SAP=3136.45;SAR=40;SRF=1737;SRP=3671.9;SRR=16;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:484:280,203:280:10853:203:7981:-557.3,0,-830.571 0/1:603:318,285:318:12397:285:11166:-816.272,0,-933.432 0/1:403:230,172:230:9059:172:6761:-478.314,0,-693.705 0/1:543:343,200:343:13219:200:7817:-516.889,0,-1025.39 0/1:636:295,341:295:11451:341:13406:-1013.62,0,-838.445 0/1:685:287,398:287:11091:398:15725:-1183.7,0,-791.356 dDocent_Contig_5113 30 . T G 3140.61 . AB=0.21645;ABP=486.967;AC=6;AF=0.5;AN=12;AO=150;CIGAR=1X;DP=693;DPB=693;DPRA=0;EPP=328.731;EPPR=1182.12;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.926667;PAIREDR=0.957643;PAO=0;PQA=0;PQR=0;PRO=0;QA=5907;QR=21763;RO=543;RPL=0;RPP=328.731;RPPR=1182.12;RPR=150;RUN=1;SAF=150;SAP=328.731;SAR=0;SRF=543;SRP=1182.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:100:72,28:72:2856:28:1064:-65.9373,0,-227.029 0/1:136:89,47:89:3575:47:1885:-128.913,0,-280.826 0/1:56:51,5:51:2033:5:200:-1.52186,0,-166.289 0/1:147:116,31:116:4697:31:1243:-67.8895,0,-378.364 0/1:134:122,12:122:4893:12:479:-3.1232,0,-399.916 0/1:120:93,27:93:3709:27:1036:-57.3905,0,-297.704 dDocent_Contig_5114 17 . T C 33157.8 . AB=0.651079;ABP=333.699;AC=6;AF=0.5;AN=12;AO=1086;CIGAR=1X;DP=1668;DPB=1668;DPRA=0;EPP=2361.23;EPPR=1266.81;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997238;PAIREDR=0.994845;PAO=0;PQA=0;PQR=0;PRO=0;QA=42566;QR=21489;RO=582;RPL=0;RPP=2361.23;RPPR=1266.81;RPR=1086;RUN=1;SAF=1086;SAP=2361.23;SAR=0;SRF=582;SRP=1266.81;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:236:69,167:69:2597:167:6530:-516.407,0,-162.894 0/1:353:201,152:201:7342:152:5932:-427.432,0,-554.425 0/1:193:83,110:83:3100:110:4294:-328.324,0,-221.066 0/1:310:113,197:113:4139:197:7743:-603.2,0,-279.298 0/1:261:81,180:81:3002:180:7033:-554.095,0,-191.796 0/1:315:35,280:35:1309:280:11034:-897.546,0,-23.2762 dDocent_Contig_5115 16 . A G 23382.7 . AB=0.147524;ABP=1027.11;AC=0;AF=0;AN=12;AO=140;CIGAR=1M1X2M;DP=2243;DPB=1811.5;DPRA=0;EPP=307.016;EPPR=2680.44;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5519;QR=48496;RO=1233;RPL=0;RPP=307.016;RPPR=2680.44;RPR=140;RUN=1;SAF=140;SAP=307.016;SAR=0;SRF=1233;SRP=2680.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:292:172,119,0:172:6795:119,0:4504,0:-317.353,0,-523.315,-369.13,-559.137,-928.282 0|0:300:188,111,0:188:7395:111,0:4223,0:-289.75,0,-574.919,-346.344,-608.334,-954.633 0|0:397:240,157,0:240:9511:157,0:6068,0:-426.457,0,-735.976,-498.704,-783.238,-1281.55 0|0:305:191,113,0:191:7492:113,0:4358,0:-300.304,0,-582.074,-357.801,-616.09,-973.903 0|0:390:188,126,74:188:7320:126,74:4869,2948:-343.246,0,-563.635,-157.096,-358.823,-736.392 0|0:559:254,237,66:254:9983:237,66:9122,2571:-672.377,0,-749.753,-537.567,-609.827,-1338.8 dDocent_Contig_5116 192 . T C 2461.78 . AB=0.0666667;ABP=51.9408;AC=0;AF=0;AN=12;AO=2;CIGAR=1X2M1X2M1X2M1X;DP=224;DPB=224;DPRA=1.5;EPP=7.35324;EPPR=270.101;GTI=0;LEN=1;MEANALT=3;MQM=9;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=0;PAIREDR=0.837398;PAO=0;PQA=0;PQR=0;PRO=0;QA=75;QR=4664;RO=123;RPL=2;RPP=7.35324;RPPR=270.101;RPR=0;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=270.101;SRR=123;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:20:19,0,1:19:712:0,1:0,35:0,-5.71957,-64.0571,-2.52197,-61.2106,-60.9096 0|0:57:27,0,29:27:1036:0,29:0,1068:-79.1866,-87.3144,-172.359,0,-85.0312,-76.3014 0|0:38:15,0,22:15:576:0,22:0,804:-61.1684,-65.6839,-112.974,0,-47.2864,-40.6637 0|0:48:30,0,18:30:1131:0,18:0,664:-45.6448,-54.6757,-147.363,0,-93.0591,-87.6406 0|0:30:15,2,12:15:572:2,12:75,442:-31.7694,-35.3053,-81.6344,0,-46.0976,-43.4697 0|0:31:17,0,14:17:637:0,14:0,518:-37.6305,-42.748,-94.9233,0,-52.5472,-48.3328 dDocent_Contig_5118 12 . G C 57.1272 . AB=0.0930233;ABP=250.457;AC=1;AF=0.0833333;AN=12;AO=46;CIGAR=1X;DP=1094;DPB=1094;DPRA=0.898977;EPP=102.898;EPPR=2278.71;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=51.2653;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.499046;PAO=0;PQA=0;PQR=0;PRO=0;QA=1858;QR=41822;RO=1048;RPL=0;RPP=102.898;RPPR=2278.71;RPR=46;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=1048;SRP=2278.71;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:148:137,11:137:5443:11:432:0,-5.32103,-442.047 0/0:217:203,14:203:8102:14:572:0,-13.5019,-653.422 0/0:166:161,5:161:6408:5:202:0,-31.4095,-544.255 0/1:172:156,16:156:6216:16:652:-7.2356,0,-498.79 0/0:167:167,0:167:6690:0:0:0,-50.272,-586.268 0/0:224:224,0:224:8963:0:0:0,-67.4307,-785.853 dDocent_Contig_5120 12 . G T 4578.4 . AB=0.128752;ABP=3313.08;AC=4;AF=0.333333;AN=12;AO=422;CIGAR=1X;DP=4516;DPB=4516;DPRA=0;EPP=919.372;EPPR=8654.16;GTI=0;LEN=1;MEANALT=2.5;MQM=59.6706;MQMR=52.9328;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=0.990521;PAIREDR=0.934303;PAO=0;PQA=0;PQR=0;PRO=0;QA=16950;QR=159438;RO=3988;RPL=0;RPP=919.372;RPPR=8662.84;RPR=422;RUN=1;SAF=422;SAP=919.372;SAR=0;SRF=3987;SRP=8654.16;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:556:467,62:467:18627:62:2480:-63.6516,0,-1447.65 0/1:759:641,106:641:25644:106:4241:-155.066,0,-1985.58 0/1:619:515,97:515:20559:97:3901:-166.428,0,-1592.48 0/1:831:735,91:735:29472:91:3654:-79.9157,0,-2265.52 0/0:808:743,37:743:29760:37:1503:0,-99.6921,-2421.73 0/0:943:887,29:887:35376:29:1171:0,-171.461,-2933.56 dDocent_Contig_5121 1 . N G 56.8582 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=3.0103;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=39.5;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0.5;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=76;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=1;SAP=3.0103;SAR=1;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:76:-5.68473,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5122 17 . C T 183.571 . AB=0.112903;ABP=406.484;AC=2;AF=0.166667;AN=12;AO=76;CIGAR=3X;DP=1284;DPB=1284;DPRA=0;EPP=168.042;EPPR=2587.06;GTI=0;LEN=1;MEANALT=2.5;MQM=43.2763;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3015;QR=47322;RO=1190;RPL=0;RPP=168.042;RPPR=2587.06;RPR=76;RUN=1;SAF=76;SAP=168.042;SAR=0;SRF=1190;SRP=2587.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:149:133,15:133:5292:15:588:-8.58504,0,-431.528 0|0:237:226,11:226:8965:11:439:0,-38.656,-773.648 0|1:161:134,20:134:5319:20:789:-12.9939,0,-432.039 0|0:190:178,7:178:7062:7:282:0,-39.5564,-619.05 0|0:286:273,12:273:10893:12:472:0,-62.6552,-956.463 0|0:261:246,11:246:9791:11:445:0,-48.8897,-851.859 dDocent_Contig_5123 11 . T C 451.617 . AB=0.191304;ABP=98.1963;AC=1;AF=0.0833333;AN=12;AO=29;CIGAR=1X;DP=658;DPB=658;DPRA=1.11111;EPP=65.983;EPPR=1368.87;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9475;NS=6;NUMALT=1;ODDS=0;PAIRED=0.689655;PAIREDR=0.793323;PAO=0;PQA=0;PQR=0;PRO=0;QA=1184;QR=25184;RO=629;RPL=0;RPP=65.983;RPPR=1368.87;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=629;SRP=1368.87;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:67:67,0:67:2678:0:0:0,-20.169,-241.136 0/0:130:130,0:130:5191:0:0:0,-39.1339,-467.058 0/0:97:97,0:97:3889:0:0:0,-29.1999,-350.006 0/0:129:129,0:129:5183:0:0:0,-38.8329,-466.326 0/1:115:93,22:93:3722:22:900:-46.6845,0,-300.254 0/0:120:113,7:113:4521:7:284:0,-10.1896,-380.883 dDocent_Contig_5125 81 . G A 721.163 . AB=0.140584;ABP=426.021;AC=1;AF=0.0833333;AN=12;AO=99;CIGAR=1X;DP=2386;DPB=2386;DPRA=0.666178;EPP=217.986;EPPR=4969.17;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3882;QR=89677;RO=2287;RPL=99;RPP=217.986;RPPR=4969.17;RPR=0;RUN=1;SAF=99;SAP=217.986;SAR=0;SRF=2287;SRP=4969.17;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:330:309,21:309:12042:21:829:0,-24.4132,-1008.1 0/1:377:324,53:324:12677:53:2077:-73.6392,0,-1026.6 0/0:289:276,13:276:10932:13:507:0,-41.0224,-937.201 0/0:367:355,12:355:13988:12:469:0,-67.9214,-1215.39 0/0:625:625,0:625:24483:0:0:0,-188.144,-2201.44 0/0:398:398,0:398:15555:0:0:0,-119.81,-1398.82 dDocent_Contig_5126 24 . T C 10091.6 . AB=0.0452358;ABP=1869.4;AC=0;AF=0;AN=12;AO=47;CIGAR=1X2M1X;DP=1039;DPB=1039;DPRA=0;EPP=105.07;EPPR=1164.75;GTI=0;LEN=1;MEANALT=3.5;MQM=53.1277;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.0212766;PAIREDR=0.979439;PAO=0;PQA=0;PQR=0;PRO=0;QA=1865;QR=21261;RO=535;RPL=0;RPP=105.07;RPPR=1164.75;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=535;SRP=1164.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:132:80,19,3,28:80:3145:19,3,28:758,121,1128:-68.8908,-33.4367,-286.379,-83.0442,-282.17,-340.809,0,-199.132,-248.745,-250.245 0|0:175:114,10,7,43:114:4571:10,7,43:398,275,1696:-105.201,-107.057,-480.651,-116.979,-461.122,-491.476,0,-344.144,-354.067,-363.662 0|0:160:73,27,17,43:73:2902:27,17,43:1080,671,1709:-118.727,-58.1188,-288.896,-85.6858,-242.009,-319.477,0,-156.329,-183.899,-225.97 0|0:211:95,17,8,90:95:3752:17,8,90:677,319,3596:-267.585,-242.092,-545.689,-271.571,-526.194,-577.877,0,-254.633,-284.113,-281.632 0|0:165:95,6,5,59:95:3769:6,5,59:242,202,2373:-166.956,-175.605,-484.041,-178.955,-469.248,-487.691,0,-290.29,-293.64,-292.478 0|0:196:78,12,7,99:78:3122:12,7,99:464,277,3852:-293.026,-279.161,-532.735,-293.784,-513.626,-548.864,0,-219.85,-234.473,-227.392 dDocent_Contig_5127 11 . T C 5563.83 . AB=0.27362;ABP=365.795;AC=5;AF=0.416667;AN=12;AO=231;CIGAR=1X;DP=953;DPB=953;DPRA=0;EPP=504.62;EPPR=1570.81;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.991342;PAIREDR=0.965374;PAO=0;PQA=0;PQR=0;PRO=0;QA=9323;QR=28809;RO=722;RPL=0;RPP=504.62;RPPR=1570.81;RPR=231;RUN=1;SAF=231;SAP=504.62;SAR=0;SRF=722;SRP=1570.81;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:138:130,8:130:5157:8:324:0,-12.0138,-434.465 0/1:162:115,47:115:4593:47:1900:-122.427,0,-364.52 0/1:110:68,42:68:2707:42:1704:-120.462,0,-210.628 0/1:176:130,46:130:5224:46:1848:-113.542,0,-417.022 0/1:165:114,51:114:4534:51:2052:-135.189,0,-358.319 0/1:202:165,37:165:6594:37:1495:-73.9838,0,-532.363 dDocent_Contig_5128 15 . C T 113.055 . AB=0.105023;ABP=299.768;AC=4;AF=0.333333;AN=12;AO=29;CIGAR=1M1D3M1X;DP=365;DPB=360.167;DPRA=0;EPP=65.983;EPPR=730.454;GTI=0;LEN=1;MEANALT=1.16667;MQM=56.8966;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.985075;PAO=0;PQA=0;PQR=0;PRO=0;QA=1136;QR=13325;RO=335;RPL=0;RPP=65.983;RPPR=730.454;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=335;SRP=730.454;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:58:53,5:53:2113:5:199:-0.824032,0,-172.902 0|1:66:57,9:57:2257:9:344:-11.3858,0,-183.447 0|1:33:30,3:30:1192:3:114:-0.696099,0,-97.6274 0|1:62:56,6:56:2221:6:238:-3.12793,0,-181.41 0|0:79:75,3:75:2998:3:121:0,-12.6615,-258.909 0|0:67:64,3:64:2544:3:120:0,-9.06342,-218.007 dDocent_Contig_5129 21 . T G 4707.68 . AB=0.326957;ABP=152.562;AC=5;AF=0.416667;AN=12;AO=194;CIGAR=1X;DP=713;DPB=713;DPRA=0;EPP=424.276;EPPR=1127.83;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7448;QR=20486;RO=518;RPL=0;RPP=424.276;RPPR=1127.83;RPR=194;RUN=1;SAF=194;SAP=424.276;SAR=0;SRF=518;SRP=1127.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:84:55,29:55:2172:29:1123:-76.0721,0,-170.377 0/1:85:44,41:44:1737:41:1582:-117.05,0,-130.969 0/1:96:57,39:57:2265:39:1501:-106.438,0,-175.127 0/1:118:87,31:87:3411:31:1185:-71.4076,0,-271.542 0/0:138:131,6:131:5199:6:206:0,-22.7632,-448.924 0/1:192:144,48:144:5702:48:1851:-109.023,0,-455.219 dDocent_Contig_5130 17 . C G 796.504 . AB=0.135076;ABP=533.933;AC=2;AF=0.166667;AN=12;AO=67;CIGAR=1X;DP=1450;DPB=1450;DPRA=0.868557;EPP=148.499;EPPR=3006.16;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2652;QR=55389;RO=1383;RPL=0;RPP=148.499;RPPR=3006.16;RPR=67;RUN=1;SAF=67;SAP=148.499;SAR=0;SRF=1383;SRP=3006.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:215:210,5:210:8392:5:202:0,-46.1596,-736.24 0/1:211:180,31:180:7187:31:1220:-46.5532,0,-582.958 0/0:341:341,0:341:13667:0:0:0,-102.651,-1228.98 0/1:248:217,31:217:8744:31:1230:-36.319,0,-711.763 0/0:194:194,0:194:7721:0:0:0,-58.3998,-694.488 0/0:241:241,0:241:9678:0:0:0,-72.5482,-870.385 dDocent_Contig_5131 7 . A G 843.956 . AB=0.214035;ABP=205.445;AC=4;AF=0.333333;AN=12;AO=68;CIGAR=1X;DP=366;DPB=366;DPRA=0;EPP=150.67;EPPR=634.909;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2103;QR=11063;RO=291;RPL=0;RPP=150.67;RPPR=634.909;RPR=68;RUN=1;SAF=68;SAP=150.67;SAR=0;SRF=291;SRP=634.909;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:39,2:39:1499:2:35:0,-9.01736,-131.859 0/1:49:43,5:43:1635:5:177:-1.54083,0,-132.693 0/0:40:35,5:35:1320:5:130:0,-0.0841156,-107.132 0/1:106:80,23:80:3026:23:713:-33.2061,0,-241.259 0/1:59:45,13:45:1710:13:407:-19.3389,0,-136.586 0/1:71:49,20:49:1873:20:641:-37.0475,0,-147.886 dDocent_Contig_5132 34 . T C 81597.9 . AB=0.512313;ABP=10.0692;AC=6;AF=0.5;AN=12;AO=2746;CIGAR=1X;DP=5360;DPB=5360;DPRA=0;EPP=5965.87;EPPR=5674.9;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999617;PAO=0;PQA=0;PQR=0;PRO=0;QA=108810;QR=104373;RO=2612;RPL=0;RPP=5965.87;RPPR=5674.9;RPR=2746;RUN=1;SAF=2746;SAP=5965.87;SAR=0;SRF=2612;SRP=5674.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:648:257,391:257:10154:391:15646:-1211.85,0,-718.151 0/1:959:432,527:432:17216:527:20969:-1596.76,0,-1259.35 0/1:603:244,359:244:9784:359:14131:-1089.22,0,-698.397 0/1:963:498,465:498:19947:465:18363:-1361.31,0,-1503.63 0/1:892:537,355:537:21498:355:14080:-997.647,0,-1664.45 0/1:1295:644,649:644:25774:649:25621:-1914.23,0,-1927.86 dDocent_Contig_5133 20 . T C 6812.14 . AB=0.229372;ABP=843.367;AC=6;AF=0.5;AN=12;AO=303;CIGAR=1X3M1X;DP=1321;DPB=1321;DPRA=0;EPP=660.966;EPPR=2183.17;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.993399;PAIREDR=0.999004;PAO=0;PQA=0;PQR=0;PRO=0;QA=12070;QR=37872;RO=1004;RPL=0;RPP=660.966;RPPR=2183.17;RPR=303;RUN=1;SAF=303;SAP=660.966;SAR=0;SRF=1004;SRP=2183.17;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:170:129,38:129:4861:38:1525:-86.831,0,-386.873 0|1:194:137,57:137:5197:57:2280:-146.971,0,-409.35 0|1:143:75,66:75:2814:66:2608:-192.02,0,-210.589 0|1:182:128,49:128:4781:49:1968:-123.635,0,-376.661 0|1:318:289,28:289:10876:28:1122:-5.72734,0,-882.954 0|1:314:246,65:246:9343:65:2567:-137.252,0,-746.66 dDocent_Contig_5134 26 . C T 112.757 . AB=0.153846;ABP=70.66;AC=3;AF=0.25;AN=12;AO=11;CIGAR=1X;DP=157;DPB=157;DPRA=0.981132;EPP=26.8965;EPPR=320.045;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.727273;PAIREDR=0.664384;PAO=0;PQA=0;PQR=0;PRO=0;QA=429;QR=5811;RO=146;RPL=0;RPP=26.8965;RPPR=320.045;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=146;SRP=320.045;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:13,3:13:514:3:121:-6.46351,0,-41.791 0/1:35:30,5:30:1201:5:186:-6.56029,0,-97.8332 0/1:14:12,2:12:470:2:81:-3.47131,0,-38.4349 0/0:39:38,1:38:1525:1:41:0,-7.6456,-133.399 0/0:22:22,0:22:867:0:0:0,-6.62266,-78.3417 0/0:31:31,0:31:1234:0:0:0,-9.33193,-111.336 dDocent_Contig_5135 98 . N T 784.277 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=25;CIGAR=1X;DP=25;DPB=25;DPRA=0;EPP=57.2971;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=845;QR=0;RO=0;RPL=25;RPP=57.2971;RPPR=0;RPR=0;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:139:-12.8527,-1.20412,0 ./.:.:.:.:.:.:.:. 1/1:7:0,7:0:0:7:245:-22.3912,-2.10721,0 1/1:12:0,12:0:0:12:393:-35.686,-3.61236,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 dDocent_Contig_5136 1 . N G 70.2594 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=74;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:74:-7.02486,-0.60206,0 dDocent_Contig_5137 4 . T C 136.916 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X9I2M1X;DP=4;DPB=13;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=141;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:71:-6.74206,-0.60206,0 dDocent_Contig_5138 12 . G A 308.158 . AB=0.44;ABP=3.79203;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=478;DPB=478;DPRA=0.275938;EPP=26.8965;EPPR=1017.09;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=439;QR=18392;RO=467;RPL=0;RPP=26.8965;RPPR=1017.09;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=467;SRP=1017.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:433:0:0:0,-3.61236,-39.2921 0/0:142:142,0:142:5584:0:0:0,-42.7463,-502.415 0/0:84:84,0:84:3285:0:0:0,-25.2865,-295.726 0/0:93:93,0:93:3713:0:0:0,-27.9958,-334.19 0/0:122:122,0:122:4814:0:0:0,-36.7257,-433.168 0/1:25:14,11:14:563:11:439:-32.3387,0,-43.4877 dDocent_Contig_5140 98 . N T 113148 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=3673;CIGAR=1X;DP=3673;DPB=3673;DPRA=0;EPP=7978.83;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999455;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=125734;QR=0;RO=0;RPL=3673;RPP=7978.83;RPPR=0;RPR=0;RUN=1;SAF=3673;SAP=7978.83;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:381:0,381:0:0:381:12951:-1165.51,-114.692,0 1/1:526:0,526:0:0:526:18056:-1624.79,-158.342,0 1/1:418:0,418:0:0:418:14348:-1291.19,-125.831,0 1/1:425:0,425:0:0:425:14586:-1312.61,-127.938,0 1/1:1039:0,1039:0:0:1039:35506:-3194.72,-312.77,0 1/1:884:0,884:0:0:884:30287:-2725.18,-266.111,0 dDocent_Contig_5141 87 . G A 37410.5 . AB=0.338389;ABP=1109.86;AC=6;AF=0.5;AN=12;AO=1651;CIGAR=1X2M1I1X;DP=4879;DPB=5318.75;DPRA=0;EPP=3588.11;EPPR=6306.79;GTI=0;LEN=1;MEANALT=8.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.193216;PAIREDR=0.988288;PAO=0;PQA=0;PQR=0;PRO=0;QA=56945;QR=97355;RO=2903;RPL=1651;RPP=3588.11;RPPR=6306.79;RPR=0;RUN=1;SAF=1651;SAP=3588.11;SAR=0;SRF=2903;SRP=6306.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:712:449,201:449:15118:201:6919:-426.81,0,-1164.49 0|1:1148:711,364:711:23945:364:12549:-805.395,0,-1830.72 0|1:682:453,167:453:15201:167:5760:-331.571,0,-1181 0|1:1193:727,386:727:24286:386:13307:-862.136,0,-1849.97 0|1:409:221,171:221:7371:171:5905:-413.249,0,-545.164 0|1:735:342,362:342:11434:362:12505:-913.111,0,-816.81 dDocent_Contig_5142 96 . A C 28676.3 . AB=0.351565;ABP=706.32;AC=4;AF=0.333333;AN=12;AO=1392;CIGAR=1X;DP=5059;DPB=5059;DPRA=0;EPP=3025.7;EPPR=7965.8;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=47708;QR=125121;RO=3667;RPL=1392;RPP=3025.7;RPPR=7965.8;RPR=0;RUN=1;SAF=1392;SAP=3025.7;SAR=0;SRF=3667;SRP=7965.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:805:711,94:711:24127:94:3167:-42.9333,0,-1928.67 0/1:959:857,102:857:29240:102:3487:-25.3712,0,-2342.32 0/0:402:366,36:366:12505:36:1256:0,-7.66884,-1012.04 0/0:982:918,64:918:31279:64:2216:0,-95.8989,-2614.74 0/1:875:341,534:341:11645:534:18312:-1384.42,0,-784.614 0/1:1036:474,562:474:16325:562:19270:-1422.14,0,-1157.18 dDocent_Contig_5143 92 . A T 2196.39 . AB=0.258352;ABP=230.744;AC=4;AF=0.333333;AN=12;AO=116;CIGAR=2X;DP=724;DPB=724.5;DPRA=0.816364;EPP=254.901;EPPR=1321.09;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=1;PQA=11;PQR=0;PRO=0;QA=4008;QR=20716;RO=607;RPL=116;RPP=254.901;RPPR=1321.09;RPR=0;RUN=1;SAF=116;SAP=254.901;SAR=0;SRF=607;SRP=1321.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:104:65,39:65:2239:39:1346:-90.1315,0,-170.474 0|1:27:22,5:22:746:5:173:-7.7824,0,-59.3278 0|0:38:38,0:38:1289:0:0:0,-11.4391,-116.309 0|1:115:100,14:100:3406:14:493:-10.141,0,-272.223 0|0:237:237,0:237:8117:0:0:0,-71.3441,-730.615 0|1:203:145,58:145:4919:58:1996:-118.806,0,-381.785 dDocent_Contig_5144 98 . N T 194.881 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=197;QR=0;RO=0;RPL=7;RPP=18.2106;RPPR=0;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:39:-3.70467,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:2:0,2:0:0:2:54:-5.12867,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 dDocent_Contig_5145 22 . T A 73.3044 . AB=0.178571;ABP=28.1373;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=201;DPB=201;DPRA=1.02256;EPP=20.3821;EPPR=422.104;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.375;PAIREDR=0.544041;PAO=0;PQA=0;PQR=0;PRO=0;QA=302;QR=7735;RO=193;RPL=0;RPP=20.3821;RPPR=422.104;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=193;SRP=422.104;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:892:0:0:0,-6.62266,-80.5864 0/0:39:39,0:39:1567:0:0:0,-11.7402,-141.263 0/0:23:23,0:23:888:0:0:0,-6.92369,-80.2153 0/0:49:49,0:49:1967:0:0:0,-14.7505,-177.221 0/1:28:23,5:23:924:5:188:-8.85329,0,-75.036 0/0:40:37,3:37:1497:3:114:0,-1.41111,-124.339 dDocent_Contig_5146 22 . A T 1108.45 . AB=0.119435;ABP=1161.6;AC=1;AF=0.0833333;AN=12;AO=256;CIGAR=1X3M1X;DP=5032;DPB=5032;DPRA=1.6637;EPP=558.907;EPPR=10337;GTI=0;LEN=1;MEANALT=3.4;MQM=59.8945;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.996094;PAIREDR=0.99958;PAO=0;PQA=0;PQR=0;PRO=0;QA=10057;QR=185792;RO=4759;RPL=0;RPP=558.907;RPPR=10337;RPR=256;RUN=1;SAF=256;SAP=558.907;SAR=0;SRF=4759;SRP=10337;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:599:567,31:567:22059:31:1229:0,-69.6872,-1873.11 0|0:924:904,18:904:35294:18:710:0,-213.579,-3109.63 0|0:540:540,0:540:21134:0:0:0,-162.556,-1900.62 0|0:1069:1031,33:1031:40258:33:1278:0,-205.326,-3504.85 0|1:921:811,110:811:31613:110:4329:-112.368,0,-2565.64 0|0:979:906,64:906:35434:64:2511:0,-66.1744,-2960.23 dDocent_Contig_5147 1 . N G 109.109 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=117;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:117:-10.9104,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5148 98 . N C 493.746 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=21;CIGAR=1X;DP=23;DPB=23;DPRA=0;EPP=48.6112;EPPR=0;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0.952381;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=531;QR=0;RO=0;RPL=21;RPP=48.6112;RPPR=0;RPR=0;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,2:0:0:2:44:-4.03872,-0.60206,0 1/1:4:0,4:0:0:4:83:-7.67572,-1.20412,0 ./.:.:.:.:.:.:.:. 1/1:6:0,6:0:0:6:162:-14.8458,-1.80618,0 1/1:5:0,4:0:0:4:109:-9.88161,-1.20412,0 1/1:5:0,5:0:0:5:133:-12.2334,-1.50515,0 dDocent_Contig_5149 23 . T G 186.472 . AB=0.157895;ABP=80.269;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=214;DPB=214;DPRA=1.10145;EPP=29.068;EPPR=439.476;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=58.5323;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.960199;PAO=0;PQA=0;PQR=0;PRO=0;QA=483;QR=8151;RO=201;RPL=0;RPP=29.068;RPPR=439.476;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=201;SRP=439.476;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:845:0:0:0,-6.32163,-76.3583 0/0:23:23,0:23:912:0:0:0,-6.92369,-82.3752 0/1:33:30,3:30:1226:3:118:-1.06759,0,-92.6373 0/1:43:33,9:33:1341:9:365:-20.1617,0,-103.386 0/0:45:45,0:45:1833:0:0:0,-13.5463,-165.164 0/0:49:49,0:49:1994:0:0:0,-14.7505,-178.613 dDocent_Contig_5150 1 . N G 194.524 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=204;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 1/1:3:0,3:0:0:3:123:-11.4648,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5151 8 . T C 9266.29 . AB=0.241003;ABP=1071.58;AC=6;AF=0.5;AN=12;AO=442;CIGAR=1X;DP=1834;DPB=1834;DPRA=0;EPP=962.801;EPPR=3017.02;GTI=0;LEN=1;MEANALT=1;MQM=46.4729;MQMR=59.0431;NS=6;NUMALT=1;ODDS=0;PAIRED=0.00226244;PAIREDR=0.791667;PAO=0;PQA=0;PQR=0;PRO=0;QA=17021;QR=53424;RO=1392;RPL=0;RPP=962.801;RPPR=3025.7;RPR=442;RUN=1;SAF=442;SAP=962.801;SAR=0;SRF=1391;SRP=3017.02;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:238:197,41:197:7571:41:1579:-64.1968,0,-606.68 0/1:307:239,68:239:9181:68:2597:-133.343,0,-731.106 0/1:281:231,50:231:8852:50:1932:-83.4255,0,-710.471 0/1:310:221,89:221:8462:89:3434:-206.827,0,-667.561 0/1:339:250,89:250:9611:89:3435:-200.195,0,-761.3 0/1:359:254,105:254:9747:105:4044:-249.863,0,-767.514 dDocent_Contig_5152 133 . A C 192.312 . AB=0.159091;ABP=91.8433;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=183;DPB=183;DPRA=1.62791;EPP=39.9253;EPPR=363.475;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.941176;PAIREDR=0.86747;PAO=0;PQA=0;PQR=0;PRO=0;QA=659;QR=6592;RO=166;RPL=0;RPP=39.9253;RPPR=363.475;RPR=17;RUN=1;SAF=0;SAP=39.9253;SAR=17;SRF=0;SRP=363.475;SRR=166;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:882:0:0:0,-6.62266,-79.6886 0/0:31:29,2:29:1140:2:82:0,-1.55225,-95.1041 0/0:21:21,0:21:845:0:0:0,-6.32163,-76.3615 0/0:21:20,1:20:802:1:41:0,-2.22706,-68.4017 0/1:54:48,6:48:1904:6:212:-3.15383,0,-155.319 0/1:34:26,8:26:1019:8:324:-19.2942,0,-81.7703 dDocent_Contig_5153 12 . C T 329.391 . AB=0.165217;ABP=114.964;AC=1;AF=0.0833333;AN=12;AO=33;CIGAR=1X;DP=597;DPB=597;DPRA=0;EPP=74.6689;EPPR=1225.55;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.939394;PAIREDR=0.884547;PAO=0;PQA=0;PQR=0;PRO=0;QA=1336;QR=22602;RO=563;RPL=0;RPP=74.6689;RPPR=1225.55;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=563;SRP=1225.55;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:72:67,5:67:2715:5:203:0,-3.0211,-225.802 0/1:115:96,19:96:3797:19:764:-34.462,0,-307.113 0/0:72:68,4:68:2746:4:164:0,-6.52426,-232.091 0/0:98:96,2:96:3869:2:82:0,-21.7213,-340.412 0/0:119:118,1:118:4761:1:41:0,-31.728,-424.27 0/0:121:118,2:118:4714:2:82:0,-28.5471,-416.465 dDocent_Contig_5154 13 . A C 605.295 . AB=0.159664;ABP=242.456;AC=4;AF=0.333333;AN=12;AO=45;CIGAR=1X;DP=358;DPB=358;DPRA=0;EPP=100.727;EPPR=682.681;GTI=0;LEN=1;MEANALT=1;MQM=59.7333;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.733333;PAIREDR=0.696486;PAO=0;PQA=0;PQR=0;PRO=0;QA=1814;QR=12403;RO=313;RPL=0;RPP=100.727;RPPR=682.681;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=313;SRP=682.681;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:34,4:34:1359:4:164:-3.71076,0,-111.128 0/1:68:58,10:58:2331:10:406:-16.4156,0,-189.47 0/0:57:53,4:53:2095:4:160:0,-2.37512,-173.948 0/1:66:56,10:56:2192:10:395:-16.0299,0,-177.585 0/0:63:60,3:60:2396:3:121:0,-7.6849,-204.504 0/1:66:52,14:52:2030:14:568:-31.5937,0,-163.022 dDocent_Contig_5155 8 . T G 50611.8 . AB=0.510088;ABP=6.12095;AC=6;AF=0.5;AN=12;AO=1795;CIGAR=1X;DP=3519;DPB=3519;DPRA=0;EPP=3900.8;EPPR=3737.94;GTI=0;LEN=1;MEANALT=1.66667;MQM=56.9415;MQMR=59.8081;NS=6;NUMALT=1;ODDS=0;PAIRED=0.674095;PAIREDR=0.67907;PAO=0;PQA=0;PQR=0;PRO=0;QA=68390;QR=65737;RO=1720;RPL=0;RPP=3900.8;RPPR=3737.94;RPR=1795;RUN=1;SAF=1795;SAP=3900.8;SAR=0;SRF=1720;SRP=3737.94;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:461:191,268:191:7317:268:10198:-776.009,0,-519.843 0/1:450:140,309:140:5342:309:11798:-923.609,0,-345.222 0/1:374:139,235:139:5313:235:8982:-692.975,0,-365.328 0/1:433:136,297:136:5211:297:11323:-884.627,0,-338.541 0/1:862:484,378:484:18501:378:14458:-1041.01,0,-1404.64 0/1:939:630,308:630:24053:308:11631:-754.171,0,-1880.45 dDocent_Contig_5156 17 . T C 259.8 . AB=0.244898;ABP=30.7077;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=150;DPB=150;DPRA=1.27273;EPP=33.4109;EPPR=298.331;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=55.7574;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.705882;PAO=0;PQA=0;PQR=0;PRO=0;QA=554;QR=5401;RO=136;RPL=0;RPP=33.4109;RPPR=298.331;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=136;SRP=298.331;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:12,7:12:459:7:277:-19.5797,0,-35.9207 0/0:14:14,0:14:568:0:0:0,-4.21442,-49.0656 0/1:30:25,5:25:980:5:203:-9.62216,0,-76.8981 0/0:35:33,2:33:1304:2:74:0,-3.51062,-109.248 0/0:19:19,0:19:762:0:0:0,-5.71957,-68.0458 0/0:33:33,0:33:1328:0:0:0,-9.93399,-109.128 dDocent_Contig_5157 72 . T C 82.7172 . AB=0.14;ABP=59.2949;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=278;DPB=278;DPRA=0.787037;EPP=29.068;EPPR=578.45;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.728302;PAO=0;PQA=0;PQR=0;PRO=0;QA=462;QR=10252;RO=265;RPL=12;RPP=29.068;RPPR=578.45;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=265;SRP=578.45;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:25,1:25:990:1:40:0,-3.8311,-85.4026 0/0:50:49,1:49:1878:1:39:0,-11.1549,-165.348 0/0:44:40,3:40:1548:3:111:0,-2.7438,-129.267 0/1:50:43,7:43:1581:7:272:-9.7946,0,-127.467 0/0:54:54,0:54:2135:0:0:0,-16.2556,-192.324 0/0:54:54,0:54:2120:0:0:0,-16.2556,-190.984 dDocent_Contig_5158 209 . N G 149.805 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=8.07091;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=163;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:163:-14.9804,-1.50515,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5159 40 . T G 1743.32 . AB=0.197674;ABP=344.386;AC=3;AF=0.25;AN=12;AO=114;CIGAR=1X;DP=855;DPB=855;DPRA=0;EPP=250.558;EPPR=1609.9;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4510;QR=29296;RO=740;RPL=0;RPP=250.558;RPPR=1609.9;RPR=114;RUN=1;SAF=114;SAP=250.558;SAR=0;SRF=740;SRP=1609.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:111:106,5:106:4252:5:183:0,-16.5984,-365.815 0/1:130:118,12:118:4682:12:472:-3.68808,0,-382.149 0/1:121:111,10:111:4409:10:401:-0.0243835,0,-360.317 0/0:191:176,15:176:6946:15:586:0,-4.4182,-571.753 0/0:123:113,9:113:4448:9:339:0,-6.27988,-369.421 0/1:179:116,63:116:4559:63:2529:-173.863,0,-356.368 dDocent_Contig_5160 12 . T C 143.269 . AB=0.109524;ABP=281.124;AC=3;AF=0.25;AN=12;AO=28;CIGAR=1X;DP=393;DPB=393;DPRA=1.25556;EPP=63.8115;EPPR=795.598;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9616;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.972603;PAO=0;PQA=0;PQR=0;PRO=0;QA=1104;QR=14625;RO=365;RPL=0;RPP=63.8115;RPPR=795.598;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=365;SRP=795.598;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:54,0:54:2172:0:0:0,-16.2556,-195.651 0/0:70:67,3:67:2660:3:119:0,-9.97708,-228.431 0/1:66:59,7:59:2346:7:280:-5.70395,0,-191.423 0/0:59:57,2:57:2294:2:78:0,-10.3573,-199.209 0/1:60:52,8:52:2099:8:326:-11.6481,0,-170.98 0/1:84:76,8:76:3054:8:301:-2.14805,0,-249.649 dDocent_Contig_5161 1 . N G 196.026 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=8.76405;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=214;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:6:0,6:0:0:6:214:-19.6026,-1.80618,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5162 21 . C T 451.113 . AB=0.177305;ABP=130.542;AC=2;AF=0.166667;AN=12;AO=25;CIGAR=1X;DP=1431;DPB=1431;DPRA=0.218605;EPP=57.2971;EPPR=3056.1;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1001;QR=55979;RO=1406;RPL=0;RPP=57.2971;RPPR=3056.1;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=1406;SRP=3056.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:189:189,0:189:7507:0:0:0,-56.8947,-675.242 0/1:33:29,4:29:1136:4:157:-4.57369,0,-92.5831 0/1:108:87,21:87:3491:21:844:-43.7593,0,-281.704 0/0:29:29,0:29:1170:0:0:0,-8.72987,-105.575 0/0:440:440,0:440:17434:0:0:0,-132.453,-1567.64 0/0:632:632,0:632:25241:0:0:0,-190.251,-2269.44 dDocent_Contig_5163 107 . N A 129.135 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=7;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=128;QR=0;RO=0;RPL=0;RPP=18.2106;RPPR=0;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:23:-2.29991,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:53:-5.03451,-0.60206,0 1/1:3:0,2:0:0:2:18:-1.64666,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:34:-3.22991,-0.60206,0 dDocent_Contig_5164 16 . T C 13967.4 . AB=0.647226;ABP=135.365;AC=6;AF=0.5;AN=12;AO=455;CIGAR=1X;DP=703;DPB=703;DPRA=0;EPP=991.03;EPPR=541.535;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=17989;QR=9834;RO=248;RPL=0;RPP=991.03;RPPR=541.535;RPR=455;RUN=1;SAF=455;SAP=991.03;SAR=0;SRF=248;SRP=541.535;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:64:28,36:28:1088:36:1376:-104.833,0,-78.944 0/1:129:48,81:48:1936:81:3218:-250.854,0,-135.601 0/1:137:81,56:81:3194:56:2246:-161.064,0,-246.3 0/1:142:26,116:26:1032:116:4587:-370.018,0,-50.4179 0/1:107:36,71:36:1426:71:2767:-216.951,0,-96.3871 0/1:124:29,95:29:1158:95:3795:-304.236,0,-67.171 dDocent_Contig_5165 60 . T G 33.3229 . AB=0.102941;ABP=96.1281;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=357;DPB=357;DPRA=1.02564;EPP=35.5824;EPPR=745.654;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.733333;PAIREDR=0.891813;PAO=0;PQA=0;PQR=0;PRO=0;QA=588;QR=11901;RO=342;RPL=15;RPP=35.5824;RPPR=745.654;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=342;SRP=745.654;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:68:61,7:61:2161:7:274:-4.55394,0,-174.262 0/0:58:55,3:55:1856:3:114:0,-6.82965,-156.66 0/0:37:35,2:35:1255:2:78:0,-3.73533,-105.837 0/0:77:74,3:74:2605:3:122:0,-11.8068,-223.286 0/0:60:60,0:60:2068:0:0:0,-18.0618,-186.368 0/0:57:57,0:57:1956:0:0:0,-17.1587,-176.276 dDocent_Contig_5166 13 . A G 5648.27 . AB=0.0562914;ABP=1035.88;AC=6;AF=0.5;AN=12;AO=34;CIGAR=5M1X1M2X1M1X3M;DP=604;DPB=614.786;DPRA=0;EPP=76.8404;EPPR=259.244;GTI=0;LEN=1;MEANALT=8.16667;MQM=33.8235;MQMR=60;NS=6;NUMALT=8;ODDS=0;PAIRED=0;PAIREDR=0.779661;PAO=0;PQA=0;PQR=0;PRO=0;QA=1139;QR=4606;RO=118;RPL=0;RPP=76.8404;RPPR=259.244;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=118;SRP=259.244;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:118:31,0,22,0,32,11,4,2,14:31:1207:0,22,0,32,11,4,2,14:0,801,0,1195,369,162,80,529:-88.5157,-97.8476,-197.052,-32.4251,-131.631,-125.008,-97.8476,-197.052,-131.631,-197.052,0,-99.2092,-33.7886,-99.2092,-89.5762,-70.7726,-169.975,-104.556,-169.975,-72.1351,-166.664,-84.4875,-183.692,-118.271,-183.692,-85.8492,-156.616,-182.488,-91.2566,-190.461,-125.04,-190.461,-92.6182,-163.384,-177.102,-189.859,-56.1734,-155.379,-89.9583,-155.379,-57.536,-128.303,-142.019,-148.788,-151.164 1|0:112:13,0,16,0,33,7,3,6,30:13:508:0,16,0,33,7,3,6,30:0,586,0,1234,230,119,245,1155:-144.221,-148.135,-189.902,-100.249,-142.016,-137.2,-148.135,-189.902,-142.016,-189.902,-47.2388,-89.0078,-41.1222,-89.0078,-79.0738,-131.4,-173.167,-125.282,-173.167,-72.2748,-171.06,-138.338,-180.105,-132.22,-180.105,-79.2106,-163.37,-179.202,-127.916,-169.684,-121.798,-169.684,-68.789,-152.949,-159.887,-167.878,-59.1256,-100.894,-53.009,-100.894,0,-84.1608,-91.0966,-80.6753,-91.8627 1|0:55:7,0,13,3,5,4,4,1,16:7:279:0,13,3,5,4,4,1,16:0,457,117,191,136,162,18,612:-60.9634,-63.0706,-86.0518,-25.8816,-48.8637,-44.9504,-53.451,-76.4327,-39.2445,-75.5297,-47.3965,-70.3785,-33.1904,-60.7592,-68.8733,-53.1227,-76.1036,-38.9175,-66.4847,-60.4307,-74.8995,-49.7082,-72.6904,-35.5017,-63.071,-57.0166,-62.7423,-71.4863,-61.7555,-84.7363,-47.5494,-75.1174,-69.0633,-74.7885,-71.3751,-84.4353,-14.2027,-37.1871,0,-27.5671,-21.5125,-27.2405,-23.8239,-35.8729,-32.3706 1|1:102:16,0,22,0,32,9,4,1,11:16:617:0,22,0,32,9,4,1,11:0,790,0,1177,296,160,41,412:-105.179,-109.996,-160.662,-45.5607,-96.2281,-89.6054,-109.996,-160.662,-96.2281,-160.662,-13.7648,-64.434,0,-64.434,-54.801,-88.3974,-139.063,-74.6308,-139.063,-42.8376,-136.354,-96.8139,-147.481,-83.0462,-147.481,-51.2516,-125.882,-146.277,-106.611,-157.278,-92.8435,-157.278,-61.0492,-135.678,-144.096,-156.977,-77.8965,-128.563,-64.1296,-128.563,-32.3351,-106.965,-115.382,-125.179,-125.252 0|0:119:36,8,18,0,13,1,3,2,36:36:1407:8,18,0,13,1,3,2,36:294,652,0,476,40,119,81,1328:-91.2066,-78.0098,-191.286,-48.8683,-140.521,-159.135,-102.044,-193.694,-164.554,-217.727,-63.1429,-154.795,-125.655,-178.828,-174.915,-98.9356,-190.587,-161.446,-214.619,-175.72,-214.318,-92.2462,-183.898,-154.757,-207.931,-169.031,-204.823,-207.027,-95.3634,-187.015,-157.874,-211.048,-172.148,-207.94,-201.251,-210.445,0,-91.6526,-62.5142,-115.684,-76.787,-112.577,-105.888,-109.005,-104.847 1|0:98:15,6,17,6,21,2,0,0,27:15:588:6,17,6,21,2,0,0,27:229,585,222,759,68,0,0,1026:-85.9624,-71.7298,-118.283,-42.9766,-72.5881,-86.218,-72.3186,-101.93,-73.1769,-118.871,-28.532,-58.1443,-29.3927,-58.7332,-70.5705,-85.5028,-115.114,-86.3606,-115.702,-71.9173,-133.259,-90.4779,-120.089,-91.3355,-120.677,-76.8921,-133.861,-138.836,-90.4779,-120.089,-91.3355,-120.677,-76.8921,-133.861,-138.836,-138.836,-13.5825,-43.1947,-14.4447,-43.7837,0,-56.9676,-61.9423,-61.9423,-53.8145 dDocent_Contig_5167 26 . A G 808.187 . AB=0.333333;ABP=25.4488;AC=1;AF=0.0833333;AN=12;AO=32;CIGAR=1X;DP=470;DPB=470;DPRA=1.26389;EPP=72.4974;EPPR=954.115;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1264;QR=17338;RO=438;RPL=0;RPP=72.4974;RPPR=954.115;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=438;SRP=954.115;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:50,0:50:2003:0:0:0,-15.0515,-180.461 0/0:110:110,0:110:4341:0:0:0,-33.1133,-390.651 0/0:41:41,0:41:1619:0:0:0,-12.3422,-145.945 0/1:93:62,31:62:2473:31:1223:-82.3416,0,-194.721 0/0:87:87,0:87:3445:0:0:0,-26.1896,-310.115 0/0:89:88,1:88:3457:1:41:0,-22.6971,-307.088 dDocent_Contig_5168 55 . T C 949.66 . AB=0.14557;ABP=520.206;AC=1;AF=0.0833333;AN=12;AO=143;CIGAR=1X;DP=2743;DPB=2743;DPRA=0.89501;EPP=313.531;EPPR=5644.5;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.993007;PAIREDR=0.999615;PAO=0;PQA=0;PQR=0;PRO=0;QA=5530;QR=102693;RO=2598;RPL=143;RPP=313.531;RPPR=5644.5;RPR=0;RUN=1;SAF=143;SAP=313.531;SAR=0;SRF=2598;SRP=5644.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:330:315,13:315:12426:13:503:0,-53.4398,-1071.87 0/1:474:405,69:405:15991:69:2656:-96.4888,0,-1295.28 0/0:457:437,20:437:17222:20:790:0,-66.1554,-1477.2 0/0:510:474,36:474:18761:36:1388:0,-28.3577,-1561.81 0/0:501:501,0:501:19839:0:0:0,-150.816,-1783.88 0/0:471:466,5:466:18454:5:193:0,-124.045,-1641.63 dDocent_Contig_5169 43 . T C 853.82 . AB=0.216931;ABP=134.551;AC=4;AF=0.333333;AN=12;AO=48;CIGAR=1X;DP=291;DPB=291;DPRA=0;EPP=107.241;EPPR=526.335;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.708333;PAIREDR=0.618257;PAO=0;PQA=0;PQR=0;PRO=0;QA=1928;QR=9529;RO=241;RPL=0;RPP=107.241;RPPR=526.335;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=241;SRP=526.335;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:50:45,5:45:1794:5:198:-3.1455,0,-146.624 0/0:57:53,4:53:2072:4:162:0,-2.19196,-171.7 0/0:45:42,3:42:1674:3:123:0,-2.08156,-139.418 0/1:46:28,18:28:1119:18:716:-50.9188,0,-87.1491 0/1:39:34,5:34:1309:5:201:-6.73035,0,-106.334 0/1:54:39,13:39:1561:13:528:-31.804,0,-124.669 dDocent_Contig_5170 98 . N T 85.3732 . AB=0;ABP=0;AC=4;AF=0.5;AN=8;AO=3;CIGAR=1X;DP=5;DPB=5;DPRA=1.5;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=2.1684e-19;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:12:-1.19999,-0.30103,0 0/0:1:0,0:0:0:0:0:0,0,0 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 ./.:.:.:.:.:.:.:. 0/0:1:0,0:0:0:0:0:0,0,0 dDocent_Contig_5171 83 . C T 7743.85 . AB=0.0596252;ABP=991.785;AC=0;AF=0;AN=12;AO=61;CIGAR=1X2M1X;DP=2266;DPB=2266;DPRA=1.59216;EPP=135.47;EPPR=3959.43;GTI=0;LEN=1;MEANALT=5.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2251;QR=66263;RO=1822;RPL=61;RPP=135.47;RPPR=3959.43;RPR=0;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=1822;SRP=3959.43;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:346:328,0,18:328:11597:0,18:0,628:0,-98.7378,-1043.23,-47.3115,-992.152,-986.734 0|0:322:304,0,13:304:10695:0,13:0,481:0,-91.5131,-962.142,-51.9988,-922.79,-918.877 0|0:276:276,0,0:276:10225:0,0:0,0:0,-83.0843,-919.997,-83.0843,-919.997,-919.997 0|0:415:370,26,18:370:13622:26,18:955,609:0,-33.2936,-1139.29,-62.0264,-1097.75,-1170.4 0|0:320:191,0,125:191:7058:0,125:0,4541:-313.464,-370.961,-948.265,0,-577.428,-539.799 0|0:587:353,35,193:353:13066:35,193:1296,6987:-464.143,-464.375,-1522.74,0,-962.879,-1010.81 dDocent_Contig_5172 57 . C T 5556.69 . AB=0.266279;ABP=411.055;AC=2;AF=0.166667;AN=12;AO=235;CIGAR=1X;DP=2691;DPB=2691;DPRA=1.08143;EPP=513.306;EPPR=4564.82;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.997149;PAO=0;PQA=0;PQR=0;PRO=0;QA=9298;QR=97923;RO=2455;RPL=235;RPP=513.306;RPPR=4564.82;RPR=0;RUN=1;SAF=235;SAP=513.306;SAR=0;SRF=2455;SRP=5333.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:420:420,0:420:16601:0:0:0,-126.433,-1492.8 0/0:517:515,2:515:20640:2:50:0,-150.888,-1851.07 0/0:357:353,3:353:14155:3:120:0,-96.1389,-1261.73 0/0:537:536,1:536:21373:1:40:0,-157.657,-1917.76 0/1:287:223,64:223:8852:64:2509:-139.55,0,-709.757 0/1:573:408,165:408:16302:165:6579:-419.341,0,-1293.37 dDocent_Contig_5173 28 . G A 246.359 . AB=0.0950292;ABP=977.366;AC=1;AF=0.0833333;AN=12;AO=128;CIGAR=1X;DP=4731;DPB=4731;DPRA=0.780032;EPP=280.959;EPPR=9993.95;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999783;PAO=0;PQA=0;PQR=0;PRO=0;QA=5083;QR=182893;RO=4601;RPL=0;RPP=280.959;RPPR=9993.95;RPR=128;RUN=1;SAF=128;SAP=280.959;SAR=0;SRF=4601;SRP=9993.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:540:530,9:530:21077:9:367:0,-129.269,-1861.75 0/0:744:716,27:716:28386:27:1072:0,-127.05,-2455.5 0/1:684:619,65:619:24681:65:2577:-26.1588,0,-2013.18 0/0:915:888,27:888:35216:27:1067:0,-179.122,-3069.87 0/0:843:843,0:843:33576:0:0:0,-253.768,-3018.73 0/0:1005:1005,0:1005:39957:0:0:0,-302.535,-3592.36 dDocent_Contig_5174 32 . T C 103.638 . AB=0.166667;ABP=37.7539;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=3M1X;DP=242;DPB=239.5;DPRA=1.04403;EPP=18.2106;EPPR=491.592;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.857143;PAIREDR=0.693333;PAO=0;PQA=0;PQR=0;PRO=0;QA=258;QR=8739;RO=225;RPL=0;RPP=18.2106;RPPR=491.592;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=225;SRP=491.592;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:39:38,0,0:38:1481:0,0:0,0:0,-11.4391,-133.154,-11.4391,-133.154,-133.154 0|0:36:36,0,0:36:1407:0,0:0,0:0,-10.8371,-126.901,-10.8371,-126.901,-126.901 0|1:36:27,2,6:27:1039:2,6:80,242:-11.8866,-13.4159,-98.1331,0,-78.7823,-83.5677 0|0:53:49,1,0:49:1917:1,0:41,0:0,-11.3631,-168.672,-14.7505,-168.973,-172.357 0|0:31:30,1,0:30:1176:1,0:41,0:0,-5.23736,-102.036,-9.0309,-102.337,-105.722 0|0:47:45,1,1:45:1719:1,1:38,16:0,-10.32,-151.264,-12.5173,-150.431,-153.246 dDocent_Contig_5175 107 . N G 219.962 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=224;QR=0;RO=0;RPL=0;RPP=22.5536;RPPR=0;RPR=9;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:54:-5.12867,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:10:-0.999996,-0.30103,0 1/1:1:0,1:0:0:1:10:-0.999996,-0.30103,0 1/1:2:0,2:0:0:2:47:-4.46396,-0.60206,0 1/1:3:0,3:0:0:3:103:-9.61002,-0.90309,0 dDocent_Contig_5176 9 . A T 4395.36 . AB=0.223167;ABP=629.394;AC=4;AF=0.333333;AN=12;AO=231;CIGAR=1X;DP=1605;DPB=1605;DPRA=0.825559;EPP=504.62;EPPR=2986.61;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992722;PAO=0;PQA=0;PQR=0;PRO=0;QA=8910;QR=52665;RO=1374;RPL=0;RPP=504.62;RPPR=2986.61;RPR=231;RUN=1;SAF=231;SAP=504.62;SAR=0;SRF=1374;SRP=2986.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:152:128,24:128:4901:24:925:-37.8107,0,-395.355 0/1:249:189,60:189:7233:60:2287:-131.093,0,-575.866 0/1:212:157,55:157:6013:55:2134:-128.466,0,-477.299 0/1:328:257,71:257:9844:71:2755:-149.388,0,-786.888 0/0:313:313,0:313:12020:0:0:0,-94.2224,-1081.3 0/0:351:330,21:330:12654:21:809:0,-32.5256,-1065.18 dDocent_Contig_5177 30 . G T 1361.95 . AB=0.147107;ABP=657.427;AC=2;AF=0.166667;AN=12;AO=111;CIGAR=1X;DP=1598;DPB=1598;DPRA=1.16112;EPP=244.044;EPPR=3227.65;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4451;QR=59340;RO=1485;RPL=0;RPP=244.044;RPPR=3227.65;RPR=111;RUN=1;SAF=111;SAP=244.044;SAR=0;SRF=1485;SRP=3227.65;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:154:152,0:152:6059:0:0:0,-45.7566,-544.772 0/1:335:276,59:276:11044:59:2366:-112.239,0,-892.35 0/0:213:207,6:207:8276:6:245:0,-41.6899,-721.926 0/1:270:240,30:240:9579:30:1202:-27.1778,0,-780.232 0/0:327:327,0:327:13082:0:0:0,-98.4368,-1176.4 0/0:299:283,16:283:11300:16:638:0,-32.2527,-958.46 dDocent_Contig_5179 120 . A C 3336.54 . AB=0.257554;ABP=357.848;AC=6;AF=0.5;AN=12;AO=179;CIGAR=1X;DP=695;DPB=695;DPRA=0;EPP=391.704;EPPR=1123.49;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.910615;PAIREDR=0.988372;PAO=0;PQA=0;PQR=0;PRO=0;QA=6136;QR=18242;RO=516;RPL=0;RPP=391.704;RPPR=1123.49;RPR=179;RUN=1;SAF=0;SAP=391.704;SAR=179;SRF=0;SRP=1123.49;SRR=516;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:100:68,32:68:2361:32:1085:-67.8515,0,-182.636 0/1:94:52,42:52:1842:42:1460:-103.401,0,-137.757 0/1:84:59,25:59:2095:25:848:-51.3445,0,-163.529 0/1:98:69,29:69:2464:29:985:-59.4571,0,-192.507 0/1:165:139,26:139:4915:26:900:-31.6453,0,-392.826 0/1:154:129,25:129:4565:25:858:-31.1763,0,-364.647 dDocent_Contig_5180 21 . G T 120.457 . AB=0.170213;ABP=47.41;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=295;DPB=295;DPRA=0.994924;EPP=22.5536;EPPR=624.051;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.111111;PAIREDR=0.458042;PAO=0;PQA=0;PQR=0;PRO=0;QA=336;QR=10721;RO=286;RPL=0;RPP=22.5536;RPPR=624.051;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=286;SRP=624.051;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:34,0:34:1278:0:0:0,-10.235,-115.307 0/0:72:72,0:72:2730:0:0:0,-21.6742,-245.891 0/0:51:50,1:50:1888:1:32:0,-12.1532,-166.967 0/0:49:49,0:49:1808:0:0:0,-14.7505,-162.975 0/0:42:42,0:42:1564:0:0:0,-12.6433,-141.027 0/1:47:39,8:39:1453:8:304:-13.5686,0,-116.895 dDocent_Contig_5181 53 . T C 6387.85 . AB=0.250916;ABP=591.487;AC=4;AF=0.333333;AN=12;AO=293;CIGAR=1X;DP=1635;DPB=1635;DPRA=0;EPP=639.252;EPPR=2914.95;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998509;PAO=0;PQA=0;PQR=0;PRO=0;QA=11571;QR=53450;RO=1341;RPL=293;RPP=639.252;RPPR=2914.95;RPR=0;RUN=1;SAF=293;SAP=639.252;SAR=0;SRF=1341;SRP=2914.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:205:195,9:195:7860:9:351:0,-29.6727,-675.027 0/1:238:183,55:183:7262:55:2178:-124.548,0,-581.583 0/0:338:328,10:328:13002:10:395:0,-65.8411,-1133.32 0/1:251:201,50:201:8007:50:1990:-103.735,0,-644.633 0/1:312:234,78:234:9296:78:3075:-182.918,0,-742.16 0/1:291:200,91:200:8023:91:3582:-234.806,0,-634.021 dDocent_Contig_5182 59 . G A 319.409 . AB=0.123552;ABP=321.814;AC=1;AF=0.0833333;AN=12;AO=34;CIGAR=1X;DP=1046;DPB=1046;DPRA=1.11313;EPP=76.8404;EPPR=2200.54;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.997036;PAO=0;PQA=0;PQR=0;PRO=0;QA=1284;QR=40048;RO=1012;RPL=34;RPP=76.8404;RPPR=2200.54;RPR=0;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=1012;SRP=2200.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:177:176,1:176:6945:1:8:0,-52.4823,-623.951 0/1:259:227,32:227:8976:32:1235:-33.4638,0,-729.367 0/0:115:114,1:114:4552:1:41:0,-30.5239,-405.512 0/0:184:184,0:184:7252:0:0:0,-55.3895,-652.35 0/0:209:209,0:209:8318:0:0:0,-62.9153,-748.176 0/0:102:102,0:102:4005:0:0:0,-30.7051,-360.452 dDocent_Contig_5183 14 . T G 915.074 . AB=0.333333;ABP=27.6203;AC=1;AF=0.0833333;AN=12;AO=41;CIGAR=1X;DP=430;DPB=430;DPRA=1.82222;EPP=92.0407;EPPR=845.542;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.914948;PAO=0;PQA=0;PQR=0;PRO=0;QA=1657;QR=15575;RO=388;RPL=0;RPP=92.0407;RPPR=845.542;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=388;SRP=845.542;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:57:57,0:57:2298:0:0:0,-17.1587,-206.976 0/1:102:68,34:68:2727:34:1372:-93.0302,0,-214.831 0/0:38:37,0:37:1499:0:0:0,-11.1381,-135.04 0/0:103:96,7:96:3837:7:285:0,-4.98168,-319.297 0/0:37:37,0:37:1481:0:0:0,-11.1381,-133.533 0/0:93:93,0:93:3733:0:0:0,-27.9958,-335.968 dDocent_Contig_5184 29 . G A 504.243 . AB=0.112205;ABP=666.575;AC=2;AF=0.166667;AN=12;AO=78;CIGAR=1X;DP=1630;DPB=1630;DPRA=0.75966;EPP=172.385;EPPR=3373.14;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998067;PAO=0;PQA=0;PQR=0;PRO=0;QA=3128;QR=61837;RO=1552;RPL=0;RPP=172.385;RPPR=3373.14;RPR=78;RUN=1;SAF=78;SAP=172.385;SAR=0;SRF=1552;SRP=3373.14;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:223:201,22:201:8024:22:893:-13.5461,0,-654.59 0/1:285:250,35:250:9950:35:1396:-40.1001,0,-809.062 0/0:120:118,2:118:4731:2:82:0,-28.3439,-417.901 0/0:355:336,19:336:13365:19:757:0,-38.4113,-1133.39 0/0:274:274,0:274:10908:0:0:0,-82.4822,-980.991 0/0:373:373,0:373:14859:0:0:0,-112.284,-1336.15 dDocent_Contig_5185 40 . G T 430.173 . AB=0.123167;ABP=423.607;AC=4;AF=0.333333;AN=12;AO=49;CIGAR=1X;DP=459;DPB=459;DPRA=0;EPP=109.412;EPPR=893.314;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0408163;PAIREDR=0.678049;PAO=0;PQA=0;PQR=0;PRO=0;QA=1959;QR=16275;RO=410;RPL=0;RPP=109.412;RPPR=893.314;RPR=49;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=410;SRP=893.314;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:60:52,8:52:2074:8:323:-11.3768,0,-168.788 0/0:71:67,4:67:2674:4:161:0,-6.49823,-225.914 0/1:151:134,17:134:5285:17:688:-16.7938,0,-430.044 0/0:47:44,3:44:1748:3:115:0,-3.42463,-146.817 0/1:67:57,10:57:2253:10:402:-16.3707,0,-182.772 0/1:63:56,7:56:2241:7:270:-5.69792,0,-182.892 dDocent_Contig_5186 20 . C G 162.646 . AB=0.0951417;ABP=706.321;AC=2;AF=0.166667;AN=12;AO=62;CIGAR=1X;DP=1466;DPB=1466;DPRA=0.75729;EPP=137.642;EPPR=3045.24;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997859;PAO=0;PQA=0;PQR=0;PRO=0;QA=2440;QR=54165;RO=1401;RPL=0;RPP=137.642;RPPR=3045.24;RPR=62;RUN=1;SAF=62;SAP=137.642;SAR=0;SRF=1401;SRP=3045.24;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:219:197,22:197:7679:22:870:-12.6751,0,-624.863 0/0:239:226,12:226:8839:12:456:0,-30.3847,-753.714 0/0:150:147,3:147:5626:3:123:0,-33.6897,-494.752 0/1:275:249,25:249:9624:25:991:-6.81135,0,-782.993 0/0:354:353,0:353:13660:0:0:0,-106.264,-1228.27 0/0:229:229,0:229:8737:0:0:0,-68.9359,-785.929 dDocent_Contig_5187 12 . C A 245.355 . AB=0.12426;ABP=210.251;AC=1;AF=0.0833333;AN=12;AO=26;CIGAR=1X;DP=1275;DPB=1275;DPRA=0.864035;EPP=59.4686;EPPR=2715.18;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9968;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1050;QR=49816;RO=1249;RPL=0;RPP=59.4686;RPPR=2715.18;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=1249;SRP=2715.18;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:169:148,21:148:5880:21:848:-25.7574,0,-478.125 0/0:231:231,0:231:9261:0:0:0,-69.5379,-832.918 0/0:193:189,4:189:7488:4:162:0,-43.1318,-658.573 0/0:229:228,1:228:9133:1:40:0,-64.9402,-817.401 0/0:234:234,0:234:9331:0:0:0,-70.441,-839.223 0/0:219:219,0:219:8723:0:0:0,-65.9256,-784.571 dDocent_Contig_5188 26 . T C 352.139 . AB=0.139785;ABP=212.639;AC=3;AF=0.25;AN=12;AO=33;CIGAR=1X;DP=375;DPB=375;DPRA=1.11579;EPP=74.6689;EPPR=745.654;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.636364;PAIREDR=0.590643;PAO=0;PQA=0;PQR=0;PRO=0;QA=1331;QR=13719;RO=342;RPL=0;RPP=74.6689;RPPR=745.654;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=342;SRP=745.654;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:57:50,7:50:1994:7:271:-7.59202,0,-162.49 0/0:74:69,5:69:2767:5:203:0,-3.62316,-230.483 0/1:70:56,14:56:2245:14:573:-30.8392,0,-181.137 0/1:59:54,5:54:2176:5:202:-0.800725,0,-178.245 0/0:57:57,0:57:2295:0:0:0,-17.1587,-206.707 0/0:58:56,2:56:2242:2:82:0,-9.68006,-194.149 dDocent_Contig_5189 25 . T C 37512.4 . AB=0.822615;ABP=1282.21;AC=6;AF=0.5;AN=12;AO=1164;CIGAR=1X;DP=1415;DPB=1415;DPRA=0;EPP=2530.6;EPPR=543.707;GTI=0;LEN=1;MEANALT=1.33333;MQM=59.9897;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0.960481;PAIREDR=0.991968;PAO=0;PQA=0;PQR=0;PRO=0;QA=46569;QR=9856;RO=249;RPL=0;RPP=2530.6;RPPR=543.707;RPR=1164;RUN=1;SAF=1164;SAP=2530.6;SAR=0;SRF=249;SRP=543.707;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:230:27,203:27:1063:203:8129:-661.924,0,-26.7182 0/1:242:59,183:59:2360:183:7316:-585.229,0,-139.706 0/1:203:48,155:48:1919:155:6265:-502.46,0,-111.8 0/1:217:29,187:29:1121:187:7464:-605.959,0,-35.7252 0/1:265:45,220:45:1795:220:8835:-714.831,0,-81.9883 0/1:258:41,216:41:1598:216:8560:-692.058,0,-66.2728 dDocent_Contig_5190 140 . A G 200.33 . AB=0.25;ABP=26.8965;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=211;DPB=211;DPRA=1.31868;EPP=35.5824;EPPR=428.619;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=529;QR=6617;RO=196;RPL=0;RPP=35.5824;RPPR=428.619;RPR=15;RUN=1;SAF=0;SAP=35.5824;SAR=15;SRF=0;SRP=428.619;SRR=196;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:553:0:0:0,-4.81648,-50.095 0/1:44:33,11:33:1132:11:383:-21.5559,0,-88.933 0/0:46:44,2:44:1460:2:72:0,-7.01074,-124.84 0/0:41:41,0:41:1358:0:0:0,-12.3422,-122.503 0/0:34:34,0:34:1162:0:0:0,-10.235,-104.876 0/0:30:28,2:28:952:2:74:0,-2.00502,-78.9557 dDocent_Contig_5191 17 . A C 15728.5 . AB=0.458298;ABP=20.5781;AC=6;AF=0.5;AN=12;AO=533;CIGAR=2X;DP=1163;DPB=1163;DPRA=0;EPP=1160.41;EPPR=1043.15;GTI=0;LEN=1;MEANALT=3.5;MQM=59.9587;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.992495;PAIREDR=0.989562;PAO=0;PQA=0;PQR=0;PRO=0;QA=20999;QR=18935;RO=479;RPL=0;RPP=1160.41;RPPR=1043.15;RPR=533;RUN=1;SAF=533;SAP=1160.41;SAR=0;SRF=479;SRP=1043.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:101:44,11,38,8:44:1753:11,38,8:430,1509,313:-110.983,-89.2055,-230.248,0,-109.337,-132.92,-98.4964,-207.828,-118.628,-240.443 0|1:109:54,8,27,20:54:2115:8,27,20:319,1077,769:-72.4414,-62.4921,-233.975,0,-147.689,-165.766,-25.5841,-173.267,-110.777,-193.451 0|1:110:72,5,31,2:72:2822:5,31,2:199,1191,79:-76.0641,-81.3507,-311.887,0,-215.646,-222.7,-91.2368,-306.891,-225.531,-322.676 0|1:131:68,31,30,2:68:2669:31,30,2:1213,1194,80:-78.6488,0,-210.158,-0.855805,-121.229,-211.321,-92.5285,-212.9,-213.761,-311.42 0|1:376:97,16,226,23:97:3871:16,226,23:628,8949,913:-707.294,-684.846,-998.833,0,-267.16,-250.775,-661.336,-928.492,-243.65,-973.216 0|1:336:144,2,181,9:144:5705:2,181,9:62,7079,340:-538.631,-577.007,-1045.96,0,-464.604,-415.09,-554.116,-1018.69,-441.713,-1020.96 dDocent_Contig_5192 198 . C T 69.7927 . AB=0.333333;ABP=5.18177;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=77;DPB=77;DPRA=0.661765;EPP=9.52472;EPPR=163.699;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.77027;PAO=0;PQA=0;PQR=0;PRO=0;QA=117;QR=2858;RO=74;RPL=3;RPP=9.52472;RPPR=163.699;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=163.699;SRR=74;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:9:6,3:6:234:3:117:-8.20111,0,-18.7218 0/0:10:10,0:10:389:0:0:0,-3.0103,-35.3684 0/0:14:14,0:14:537:0:0:0,-4.21442,-48.6741 0/0:20:20,0:20:771:0:0:0,-6.0206,-69.7184 0/0:17:17,0:17:654:0:0:0,-5.11751,-59.1954 0/0:7:7,0:7:273:0:0:0,-2.10721,-24.938 dDocent_Contig_5193 1 . N G 115.079 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=25.8;MQMR=0;NS=1;NUMALT=1;ODDS=8.07091;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=195;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:195:-11.5077,-1.50515,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5194 78 . C A 38050.6 . AB=0.372367;ABP=567.29;AC=6;AF=0.5;AN=12;AO=1485;CIGAR=1X;DP=3988;DPB=3988;DPRA=0;EPP=3227.65;EPPR=5433.86;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997201;PAO=0;PQA=0;PQR=0;PRO=0;QA=55756;QR=94207;RO=2501;RPL=1485;RPP=3227.65;RPPR=5433.86;RPR=0;RUN=1;SAF=1485;SAP=3227.65;SAR=0;SRF=2501;SRP=5433.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:538:351,187:351:12857:187:6711:-442.067,0,-994.88 0/1:599:467,131:467:17037:131:4762:-248.612,0,-1352.7 0/1:467:392,74:392:14970:74:2808:-112.324,0,-1206 0/1:755:593,162:593:22670:162:6086:-320.417,0,-1811.72 0/1:938:374,564:374:14286:564:21414:-1643.75,0,-1002.7 0/1:691:324,367:324:12387:367:13975:-1049.11,0,-906.282 dDocent_Contig_5195 26 . C A 44247.4 . AB=0.678095;ABP=581.557;AC=6;AF=0.5;AN=12;AO=1424;CIGAR=1X;DP=2100;DPB=2100;DPRA=0;EPP=3095.19;EPPR=1460.07;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99851;PAO=0;PQA=0;PQR=0;PRO=0;QA=56345;QR=26749;RO=671;RPL=0;RPP=3095.19;RPPR=1460.07;RPR=1424;RUN=1;SAF=1424;SAP=3095.19;SAR=0;SRF=671;SRP=1460.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:359:159,199:159:6341:199:7947:-606.686,0,-462.297 0/1:503:156,345:156:6256:345:13547:-1067.08,0,-411.569 0/1:322:111,211:111:4408:211:8356:-654.656,0,-299.721 0/1:534:172,362:172:6827:362:14317:-1126.74,0,-453.374 0/1:99:34,65:34:1353:65:2528:-197.872,0,-92.229 0/1:283:39,242:39:1564:242:9650:-782.931,0,-56.0128 dDocent_Contig_5196 43 . C T 92.9587 . AB=0.125;ABP=90.9549;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=282;DPB=282;DPRA=1.83673;EPP=24.725;EPPR=593.651;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=381;QR=10933;RO=272;RPL=0;RPP=24.725;RPPR=593.651;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=272;SRP=593.651;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:1050:0:0:0,-7.82678,-94.7907 0/1:72:63,9:63:2564:9:357:-10.8188,0,-209.202 0/0:36:36,0:36:1442:0:0:0,-10.8371,-130.032 0/0:21:21,0:21:848:0:0:0,-6.32163,-76.6331 0/0:64:64,0:64:2562:0:0:0,-19.2659,-230.709 0/0:63:62,1:62:2467:1:24:0,-16.565,-219.771 dDocent_Contig_5197 12 . T C 4244.87 . AB=0.267692;ABP=307.698;AC=5;AF=0.416667;AN=12;AO=178;CIGAR=1X;DP=741;DPB=741;DPRA=0;EPP=389.532;EPPR=1225.55;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.994382;PAIREDR=0.960924;PAO=0;PQA=0;PQR=0;PRO=0;QA=7142;QR=21637;RO=563;RPL=0;RPP=389.532;RPPR=1225.55;RPR=178;RUN=1;SAF=178;SAP=389.532;SAR=0;SRF=563;SRP=1225.55;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:91:87,4:87:3369:4:163:0,-12.3353,-288.259 0/1:156:118,38:118:4558:38:1513:-89.4546,0,-363.277 0/1:90:50,40:50:1929:40:1618:-118.755,0,-146.74 0/1:116:66,50:66:2517:50:1991:-144.458,0,-191.796 0/1:129:102,27:102:3854:27:1090:-59.5533,0,-308.099 0/1:159:140,19:140:5410:19:767:-21.4876,0,-438.971 dDocent_Contig_5198 107 . N A 140.537 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=138;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_5199 24 . T A 2243.26 . AB=0.214429;ABP=356.473;AC=3;AF=0.25;AN=12;AO=115;CIGAR=1X;DP=956;DPB=956;DPRA=1.97273;EPP=252.73;EPPR=1829.22;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4533;QR=33815;RO=841;RPL=0;RPP=252.73;RPPR=1829.22;RPR=115;RUN=1;SAF=115;SAP=252.73;SAR=0;SRF=841;SRP=1829.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:88:88,0:88:3534:0:0:0,-26.4906,-318.085 0/0:115:112,3:112:4517:3:122:0,-23.246,-395.07 0/1:99:63,36:63:2520:36:1397:-96.1752,0,-197.132 0/1:73:66,7:66:2676:7:267:-2.4098,0,-218.972 0/0:254:249,5:249:10020:5:200:0,-58.0821,-882.728 0/1:327:263,64:263:10548:64:2547:-130.936,0,-850.143 dDocent_Contig_5200 8 . G A 489.096 . AB=0.148594;ABP=270.084;AC=2;AF=0.166667;AN=12;AO=49;CIGAR=1X;DP=677;DPB=677;DPRA=1.19588;EPP=109.412;EPPR=1362.35;GTI=0;LEN=1;MEANALT=1.4;MQM=59.6939;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.926518;PAO=0;PQA=0;PQR=0;PRO=0;QA=1863;QR=23911;RO=626;RPL=0;RPP=109.412;RPPR=1362.35;RPR=49;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=626;SRP=1362.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:108:85,23:85:3213:23:876:-46.6272,0,-256.813 0/1:141:127,14:127:4853:14:529:-5.5043,0,-394.358 0/0:72:68,4:68:2595:4:155:0,-7.34872,-219.421 0/0:125:117,6:117:4492:6:226:0,-16.6055,-383.661 0/0:97:97,0:97:3723:0:0:0,-29.1999,-335.178 0/0:134:132,2:132:5035:2:77:0,-33.0289,-445.851 dDocent_Contig_5201 133 . T C 61.2819 . AB=0.166667;ABP=26.1727;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=155;DPB=155;DPRA=0.86747;EPP=18.2106;EPPR=315.761;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.142857;PAIREDR=0.851351;PAO=0;PQA=0;PQR=0;PRO=0;QA=270;QR=5772;RO=148;RPL=7;RPP=18.2106;RPPR=315.761;RPR=0;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=324.388;SRR=148;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:21,2:21:839:2:69:0,-0.372365,-69.275 0/0:22:22,0:22:851:0:0:0,-6.62266,-76.8993 0/0:25:24,1:24:958:1:40:0,-3.53007,-82.5248 0/1:24:20,4:20:741:4:161:-7.65076,0,-59.7662 0/0:34:34,0:34:1333:0:0:0,-10.235,-120.227 0/0:27:27,0:27:1050:0:0:0,-8.12781,-94.7847 dDocent_Contig_5202 1 . N G 74.9872 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=79;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:79:-7.49763,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5204 126 . T C 141.524 . AB=0.126531;ABP=299.828;AC=2;AF=0.166667;AN=12;AO=57;CIGAR=1X;DP=690;DPB=690;DPRA=0;EPP=126.784;EPPR=1377.55;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=40;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1870;QR=21287;RO=633;RPL=0;RPP=126.784;RPPR=1377.55;RPR=57;RUN=1;SAF=0;SAP=126.784;SAR=57;SRF=0;SRP=1377.55;SRR=633;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:92:81,11:81:2725:11:372:-5.12475,0,-210.483 0/0:90:83,7:83:2844:7:245:0,-5.45621,-226.547 0/1:153:133,20:133:4503:20:664:-12.2494,0,-346.965 0/0:119:108,11:108:3619:11:355:0,-4.59787,-284.984 0/0:137:134,3:134:4441:3:90:0,-33.0678,-379.854 0/0:99:94,5:94:3155:5:144:0,-16.7939,-262.653 dDocent_Contig_5205 120 . A G 59.1638 . AB=0.235294;ABP=13.3567;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=184;DPB=184;DPRA=0.508982;EPP=5.18177;EPPR=376.697;GTI=0;LEN=1;MEANALT=1;MQM=50.75;MQMR=59.4444;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.777778;PAO=0;PQA=0;PQR=0;PRO=0;QA=150;QR=6941;RO=180;RPL=1;RPP=5.18177;RPPR=376.697;RPR=3;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=393.875;SRR=180;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:744:0:0:0,-5.71957,-67.2872 0/0:58:58,0:58:2225:0:0:0,-17.4597,-197.671 0/0:26:26,0:26:999:0:0:0,-7.82678,-90.2113 0/0:31:31,0:31:1203:0:0:0,-9.33193,-108.552 0/0:33:33,0:33:1266:0:0:0,-9.93399,-111.526 0/1:17:13,4:13:504:4:150:-7.43926,0,-40.5913 dDocent_Contig_5206 23 . T A 119888 . AB=0.885196;ABP=4268.87;AC=7;AF=0.583333;AN=12;AO=3692;CIGAR=1X;DP=4133;DPB=4133;DPRA=0;EPP=8020.09;EPPR=958.458;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=0.999729;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=146953;QR=17583;RO=440;RPL=0;RPP=8020.09;RPPR=958.458;RPR=3692;RUN=1;SAF=3692;SAP=8020.09;SAR=0;SRF=440;SRP=958.458;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:597:84,513:84:3352:513:20408:-1655.31,0,-122.013 0/1:666:64,602:64:2595:602:23969:-1954.63,0,-33.1816 0/1:516:60,455:60:2406:455:18187:-1480.11,0,-61.4688 0/1:660:65,595:65:2628:595:23620:-1925.1,0,-37.9563 0/1:871:106,765:106:4174:765:30552:-2484.7,0,-113.433 1/1:823:61,762:61:2428:762:30217:-2498.15,-29.0854,0 dDocent_Contig_5207 15 . C G 2351.73 . AB=0.340741;ABP=62.4926;AC=6;AF=0.5;AN=12;AO=92;CIGAR=1X;DP=270;DPB=270;DPRA=0;EPP=202.786;EPPR=389.532;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.858696;PAIREDR=0.848315;PAO=0;PQA=0;PQR=0;PRO=0;QA=3619;QR=7081;RO=178;RPL=0;RPP=202.786;RPPR=389.532;RPR=92;RUN=1;SAF=92;SAP=202.786;SAR=0;SRF=178;SRP=389.532;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:40:29,11:29:1156:11:419:-26.0119,0,-92.2804 0/1:59:33,26:33:1313:26:990:-71.6306,0,-100.68 0/1:45:23,22:23:920:22:894:-67.2183,0,-69.5611 0/1:44:31,13:31:1236:13:529:-34.7115,0,-98.268 0/1:44:29,15:29:1148:15:607:-41.7213,0,-90.3615 0/1:38:33,5:33:1308:5:180:-5.10085,0,-106.549 dDocent_Contig_5208 98 . N C 127.905 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=126;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:57:-5.41388,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5209 146 . G T 165.475 . AB=0.0982368;ABP=559.613;AC=1;AF=0.0833333;AN=12;AO=64;CIGAR=1X;DP=1812;DPB=1812;DPRA=1.77489;EPP=141.985;EPPR=3798.74;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2521;QR=69148;RO=1748;RPL=64;RPP=141.985;RPPR=3798.74;RPR=0;RUN=1;SAF=0;SAP=141.985;SAR=64;SRF=0;SRP=3798.74;SRR=1748;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:356:339,17:339:13263:17:674:0,-46.1781,-1131.74 0/1:397:358,39:358:14235:39:1526:-18.0704,0,-1160.56 0/0:240:240,0:240:9531:0:0:0,-72.2472,-857.183 0/0:406:398,8:398:15678:8:321:0,-92.9612,-1380.58 0/0:328:328,0:328:13015:0:0:0,-98.7378,-1170.43 0/0:85:85,0:85:3426:0:0:0,-25.5875,-308.374 dDocent_Contig_5210 7 . A T 2290.78 . AB=0.182927;ABP=647.461;AC=3;AF=0.25;AN=12;AO=159;CIGAR=1X;DP=1353;DPB=1353;DPRA=0;EPP=348.274;EPPR=2587.06;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5955;QR=45001;RO=1190;RPL=0;RPP=348.274;RPPR=2587.06;RPR=159;RUN=1;SAF=159;SAP=348.274;SAR=0;SRF=1190;SRP=2587.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:273:249,21:249:9426:21:805:0,-8.76343,-775.322 0/1:288:246,42:246:9243:42:1530:-51.2659,0,-744.929 0/1:164:133,31:133:5055:31:1179:-57.0376,0,-405.608 0/1:286:223,62:223:8446:62:2352:-125.996,0,-674.04 0/0:177:176,1:176:6611:1:11:0,-52.1823,-593.823 0/0:165:163,2:163:6220:2:78:0,-42.2665,-552.342 dDocent_Contig_5211 14 . G C 97032.9 . AB=0.600488;ABP=218.599;AC=9;AF=0.75;AN=12;AO=3002;CIGAR=1X;DP=4091;DPB=4091;DPRA=0;EPP=6521.77;EPPR=2363.4;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=0.999667;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=120448;QR=43412;RO=1087;RPL=0;RPP=6521.77;RPPR=2363.4;RPR=3002;RUN=1;SAF=3002;SAP=6521.77;SAR=0;SRF=1087;SRP=2363.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:534:35,499:35:1372:499:19978:-1672.57,-37.011,0 0/1:787:96,691:96:3858:691:27768:-2259.65,0,-110.298 1/1:431:18,413:18:725:413:16522:-1420.06,-64.1708,0 1/1:668:53,614:53:2132:614:24638:-2023.15,-9.14829,0 0/1:655:302,353:302:12090:353:14110:-1071.64,0,-890.062 0/1:1016:583,432:583:23235:432:17432:-1261.43,0,-1783.17 dDocent_Contig_5212 48 . G A 453.805 . AB=0.16185;ABP=174.833;AC=3;AF=0.25;AN=12;AO=33;CIGAR=1X;DP=380;DPB=380;DPRA=0.80137;EPP=74.6689;EPPR=756.511;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.757576;PAIREDR=0.850144;PAO=0;PQA=0;PQR=0;PRO=0;QA=1309;QR=13842;RO=347;RPL=0;RPP=74.6689;RPPR=756.511;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=347;SRP=756.511;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:35,7:35:1401:7:277:-12.6549,0,-113.697 0/1:68:62,6:62:2493:6:242:-1.68749,0,-204.03 0/0:61:56,5:56:2264:5:184:0,-1.44903,-187.003 0/1:63:48,15:48:1906:15:606:-35.9135,0,-152.776 0/0:69:69,0:69:2745:0:0:0,-20.7711,-247.172 0/0:77:77,0:77:3033:0:0:0,-23.1793,-273.054 dDocent_Contig_5213 13 . G A 3882.42 . AB=0.118981;ABP=4062.1;AC=5;AF=0.416667;AN=12;AO=434;CIGAR=1X;DP=3877;DPB=3877;DPRA=0;EPP=945.429;EPPR=7477.22;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=1;PAIREDR=0.998838;PAO=0;PQA=0;PQR=0;PRO=0;QA=17232;QR=136612;RO=3442;RPL=0;RPP=945.429;RPPR=7477.22;RPR=434;RUN=1;SAF=434;SAP=945.429;SAR=0;SRF=3442;SRP=7477.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:595:490,104:490:19432:104:4094:-189.247,0,-1568.08 0/1:725:646,79:646:25735:79:3124:-63.0007,0,-2095.65 0/1:446:388,58:388:15364:58:2322:-74.8796,0,-1247.33 0/1:675:607,68:607:24067:68:2750:-44.4103,0,-1960.78 0/1:778:704,74:704:27870:74:2889:-25.9266,0,-2271.69 0/0:658:607,51:607:24144:51:2053:0,-13.1263,-1985.92 dDocent_Contig_5214 23 . C A 7436.42 . AB=0.489524;ABP=3.51077;AC=6;AF=0.5;AN=12;AO=257;CIGAR=2X;DP=525;DPB=525;DPRA=0;EPP=561.079;EPPR=576.279;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.961089;PAIREDR=0.981061;PAO=0;PQA=0;PQR=0;PRO=0;QA=10119;QR=10522;RO=264;RPL=0;RPP=561.079;RPPR=576.279;RPR=257;RUN=1;SAF=257;SAP=561.079;SAR=0;SRF=264;SRP=576.279;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:97:59,38:59:2352:38:1451:-101.635,0,-182.639 0|1:119:66,53:66:2605:53:2092:-152.654,0,-198.771 0|1:79:30,49:30:1179:49:1935:-150.576,0,-82.6043 0|1:90:40,46:40:1599:46:1819:-137.643,0,-117.855 0|1:66:30,36:30:1206:36:1438:-109.808,0,-88.9482 0|1:74:39,35:39:1581:35:1384:-102.548,0,-120.244 dDocent_Contig_5215 30 . C T 19263.5 . AB=0.479212;ABP=8.15626;AC=6;AF=0.5;AN=12;AO=657;CIGAR=1X;DP=1371;DPB=1371;DPRA=0;EPP=1429.67;EPPR=1553.44;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.996956;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=26117;QR=28352;RO=714;RPL=0;RPP=1429.67;RPPR=1553.44;RPR=657;RUN=1;SAF=657;SAP=1429.67;SAR=0;SRF=714;SRP=1553.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:249:140,109:140:5552:109:4297:-311.756,0,-424.542 0/1:188:82,106:82:3233:106:4210:-322.287,0,-234.447 0/1:251:122,129:122:4896:129:5165:-389.152,0,-364.964 0/1:210:59,151:59:2351:151:6013:-477.741,0,-148.529 0/1:131:115,16:115:4531:16:636:-18.1388,0,-368.291 0/1:342:196,146:196:7789:146:5796:-418.498,0,-597.665 dDocent_Contig_5216 98 . N C 10016 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=338;CIGAR=3X;DP=338;DPB=339.333;DPRA=0;EPP=736.968;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=4;PQA=100;PQR=0;PRO=0;QA=11115;QR=0;RO=0;RPL=338;RPP=736.968;RPPR=0;RPR=0;RUN=1;SAF=338;SAP=736.968;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:43:0,43:0:0:43:1367:-123.069,-12.9443,0 1|1:43:0,43:0:0:43:1384:-124.672,-12.9443,0 .:.:.:.:.:.:.:. 1|1:22:0,22:0:0:22:713:-64.4747,-6.62266,0 1|1:150:0,150:0:0:150:4982:-448.22,-45.1545,0 1|1:80:0,80:0:0:80:2669:-240.466,-24.0824,0 dDocent_Contig_5217 53 . T G 468 . AB=0.172973;ABP=174.862;AC=3;AF=0.25;AN=12;AO=36;CIGAR=1X;DP=367;DPB=367;DPRA=0;EPP=81.1833;EPPR=721.768;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.583333;PAIREDR=0.534743;PAO=0;PQA=0;PQR=0;PRO=0;QA=1293;QR=12108;RO=331;RPL=21;RPP=5.18177;RPPR=25.8468;RPR=15;RUN=1;SAF=21;SAP=5.18177;SAR=15;SRF=195;SRP=25.8468;SRR=136;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:52:43,9:43:1604:9:322:-13.6645,0,-128.951 0/1:62:57,5:57:2156:5:204:-0.0801727,0,-175.569 0/1:71:53,18:53:1871:18:638:-36.3565,0,-147.248 0/0:64:63,1:63:2296:1:41:0,-15.1714,-202.748 0/0:39:37,2:37:1306:2:69:0,-5.18828,-111.26 0/0:79:78,1:78:2875:1:19:0,-21.8814,-256.991 dDocent_Contig_5218 9 . T C 2461.18 . AB=0.133209;ABP=1889.06;AC=3;AF=0.25;AN=12;AO=301;CIGAR=1X;DP=2925;DPB=2925;DPRA=0;EPP=656.623;EPPR=5696.61;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.199336;PAIREDR=0.00228833;PAO=0;PQA=0;PQR=0;PRO=0;QA=11494;QR=98155;RO=2622;RPL=0;RPP=656.623;RPPR=5696.61;RPR=301;RUN=1;SAF=301;SAP=656.623;SAR=0;SRF=2622;SRP=5696.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:508:481,27:481:17948:27:1047:0,-58.3856,-1519.98 0/1:578:474,103:474:17745:103:3945:-181.199,0,-1422.32 0/0:445:408,37:408:15299:37:1408:0,-6.95434,-1249.29 0/1:653:591,61:591:22119:61:2314:-11.8529,0,-1793.01 0/0:358:336,22:336:12621:22:854:0,-30.5865,-1058.25 0/1:383:332,51:332:12423:51:1926:-58.2881,0,-1002.32 dDocent_Contig_5219 98 . N C 2201.64 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=71;CIGAR=1X;DP=71;DPB=71;DPRA=0;EPP=157.185;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2415;QR=0;RO=0;RPL=71;RPP=157.185;RPPR=0;RPR=0;RUN=1;SAF=71;SAP=157.185;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:140:-12.9449,-1.20412,0 1/1:5:0,5:0:0:5:163:-14.9919,-1.50515,0 1/1:12:0,12:0:0:12:417:-37.8632,-3.61236,0 1/1:11:0,11:0:0:11:376:-34.1699,-3.31133,0 1/1:14:0,14:0:0:14:481:-43.6182,-4.21442,0 1/1:25:0,25:0:0:25:838:-75.7304,-7.52575,0 dDocent_Contig_5221 53 . T C 5985.99 . AB=0.16362;ABP=2153.43;AC=5;AF=0.416667;AN=12;AO=410;CIGAR=1X;DP=2877;DPB=2877;DPRA=0;EPP=893.314;EPPR=5347;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999187;PAO=0;PQA=0;PQR=0;PRO=0;QA=16106;QR=95101;RO=2461;RPL=410;RPP=893.314;RPPR=5347;RPR=0;RUN=1;SAF=410;SAP=893.314;SAR=0;SRF=2461;SRP=5347;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:363:249,113:249:9503:113:4443:-290.599,0,-745.632 0/1:391:337,52:337:12998:52:2044:-66.6815,0,-1051.6 0/1:385:319,65:319:12350:65:2569:-115.367,0,-994.798 0/1:363:298,63:298:11547:63:2443:-110.96,0,-929.55 0/0:689:637,52:637:24577:52:2045:0,-23.161,-2025.96 0/1:686:621,65:621:24126:65:2562:-24.2135,0,-1963.08 dDocent_Contig_5222 16 . C A 2042.9 . AB=0.121604;ABP=1925.73;AC=3;AF=0.25;AN=12;AO=233;CIGAR=1X;DP=3271;DPB=3271;DPRA=0.681671;EPP=508.963;EPPR=6595.6;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998024;PAO=0;PQA=0;PQR=0;PRO=0;QA=9268;QR=121914;RO=3036;RPL=0;RPP=508.963;RPPR=6595.6;RPR=233;RUN=1;SAF=233;SAP=508.963;SAR=0;SRF=3036;SRP=6595.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:309:254,55:254:10215:55:2161:-101.648,0,-825.631 0/1:474:434,40:434:17470:40:1601:-1.6357,0,-1428.13 0/0:313:305,7:305:12283:7:284:0,-68.3963,-1078.61 0/0:670:632,38:632:25396:38:1493:0,-67.0759,-2148.7 0/0:742:742,0:742:29798:0:0:0,-223.364,-2679.03 0/1:763:669,93:669:26752:93:3729:-105.833,0,-2175.48 dDocent_Contig_5223 98 . N G 74.5364 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=72;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,1:0:0:1:5:-0.439999,-0.30103,0 1/1:3:0,3:0:0:3:32:-2.98665,-0.90309,0 dDocent_Contig_5224 47 . C T 2077.9 . AB=0.182553;ABP=544.822;AC=3;AF=0.25;AN=12;AO=153;CIGAR=1X;DP=1327;DPB=1327;DPRA=0;EPP=335.246;EPPR=2502.44;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99914;PAO=0;PQA=0;PQR=0;PRO=0;QA=6033;QR=45356;RO=1163;RPL=0;RPP=335.246;RPPR=2502.44;RPR=153;RUN=1;SAF=153;SAP=335.246;SAR=0;SRF=1163;SRP=2528.43;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:147:126,21:126:4941:21:811:-29.0513,0,-400.371 0/1:179:151,28:151:5884:28:1092:-44.6835,0,-475.535 0/0:181:167,14:167:6523:14:569:0,-2.93395,-535.297 0/0:149:138,11:138:5319:11:441:0,-4.80991,-438.573 0/0:378:352,15:352:13720:15:594:0,-57.0728,-1180.14 0/1:293:229,64:229:8969:64:2526:-139.277,0,-718.562 dDocent_Contig_5225 85 . T A 94.0748 . AB=0.101836;ABP=827.84;AC=1;AF=0.0833333;AN=12;AO=72;CIGAR=1X;DP=3073;DPB=3073;DPRA=1.14156;EPP=159.356;EPPR=6513.08;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999666;PAO=0;PQA=0;PQR=0;PRO=0;QA=2462;QR=104122;RO=2998;RPL=72;RPP=159.356;RPPR=6513.08;RPR=0;RUN=1;SAF=72;SAP=159.356;SAR=0;SRF=2998;SRP=6513.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:359:357,1:357:12168:1:7:0,-107.204,-1094.3 0/0:402:402,0:402:13798:0:0:0,-121.014,-1241.71 0/0:558:557,1:557:19410:1:10:0,-166.975,-1745.52 0/0:534:534,0:534:18681:0:0:0,-160.75,-1680.93 0/0:621:610,9:610:21324:9:323:0,-157.151,-1889.31 0/1:599:538,61:538:18741:61:2122:-10.9304,0,-1506 dDocent_Contig_5226 10 . G A 55.7255 . AB=0.101266;ABP=221.202;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=504;DPB=504;DPRA=0.913295;EPP=37.7539;EPPR=1062.69;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=618;QR=18654;RO=488;RPL=0;RPP=37.7539;RPPR=1062.69;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=488;SRP=1062.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:108:97,11:97:3716:11:425:-6.09015,0,-302.029 0/0:109:109,0:109:4162:0:0:0,-32.8123,-374.641 0/0:65:65,0:65:2493:0:0:0,-19.5669,-224.55 0/0:124:124,0:124:4737:0:0:0,-37.3277,-426.349 0/1:50:45,5:45:1720:5:193:-2.68969,0,-139.998 0/0:48:48,0:48:1826:0:0:0,-14.4494,-164.577 dDocent_Contig_5227 35 . T C 329.495 . AB=0.153846;ABP=165.37;AC=2;AF=0.166667;AN=12;AO=24;CIGAR=1X;DP=484;DPB=484;DPRA=0.95122;EPP=55.1256;EPPR=999.716;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0.836601;PAO=0;PQA=0;PQR=0;PRO=0;QA=916;QR=16943;RO=459;RPL=0;RPP=55.1256;RPPR=999.716;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=459;SRP=999.716;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:80:80,0:80:2980:0:0:0,-24.0824,-268.378 0/0:98:97,0:97:3533:0:0:0,-29.1999,-317.7 0/0:82:82,0:82:3047:0:0:0,-24.6845,-274.407 0/0:68:68,0:68:2521:0:0:0,-20.47,-227.093 0/1:71:55,16:55:1990:16:593:-32.3193,0,-157.972 0/1:85:77,8:77:2872:8:323:-3.85104,0,-233.088 dDocent_Contig_5228 45 . C T 136.661 . AB=0.129412;ABP=104.405;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=288;DPB=288;DPRA=1.50435;EPP=31.2394;EPPR=600.165;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=531;QR=10840;RO=275;RPL=0;RPP=31.2394;RPPR=600.165;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=275;SRP=600.165;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:49:45,4:45:1794:4:164:-0.399429,0,-146.928 0/1:36:29,7:29:1143:7:285:-15.1871,0,-92.317 0/0:88:86,2:86:3419:2:82:0,-18.711,-299.98 0/0:21:21,0:21:812:0:0:0,-6.32163,-73.388 0/0:67:67,0:67:2629:0:0:0,-20.169,-236.742 0/0:27:27,0:27:1043:0:0:0,-8.12781,-94.146 dDocent_Contig_5230 1 . N G 191.803 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=201;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 1/1:4:0,4:0:0:4:160:-14.7834,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5231 7 . A T 89.6089 . AB=0.119658;ABP=150.021;AC=3;AF=0.25;AN=12;AO=16;CIGAR=1X;DP=264;DPB=264;DPRA=0.777778;EPP=37.7539;EPPR=537.193;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0.621951;PAO=0;PQA=0;PQR=0;PRO=0;QA=612;QR=9322;RO=246;RPL=0;RPP=37.7539;RPPR=537.193;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=246;SRP=537.193;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:32,4:32:1237:4:155:-3.48836,0,-100.786 0/1:29:26,3:26:1002:3:117:-2.18051,0,-81.7611 0/1:52:45,7:45:1719:7:264:-8.46644,0,-139.316 0/0:57:55,1:55:2057:1:39:0,-13.2059,-181.604 0/0:36:34,1:34:1238:1:37:0,-7.10311,-108.103 0/0:54:54,0:54:2069:0:0:0,-16.2556,-186.444 dDocent_Contig_5232 8 . G A 884.134 . AB=0.183453;ABP=244.965;AC=2;AF=0.166667;AN=12;AO=51;CIGAR=1X;DP=602;DPB=602;DPRA=1.71605;EPP=113.755;EPPR=1139.46;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.956443;PAO=0;PQA=0;PQR=0;PRO=0;QA=1941;QR=20968;RO=551;RPL=0;RPP=113.755;RPPR=1199.49;RPR=51;RUN=1;SAF=51;SAP=113.755;SAR=0;SRF=544;SRP=1139.46;SRR=7;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:65:65,0:65:2475:0:0:0,-19.5669,-222.951 0/0:104:104,0:104:3952:0:0:0,-31.3071,-355.777 0/0:101:101,0:101:3844:0:0:0,-30.404,-346.062 0/0:54:54,0:54:2073:0:0:0,-16.2556,-186.8 0/1:134:121,13:121:4575:13:503:-5.28079,0,-371.475 0/1:144:106,38:106:4049:38:1438:-86.3544,0,-321.151 dDocent_Contig_5233 95 . A G 1875.64 . AB=0.322464;ABP=78.5712;AC=2;AF=0.166667;AN=12;AO=95;CIGAR=1X;DP=857;DPB=857;DPRA=0.891234;EPP=209.3;EPPR=1655.5;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.975033;PAO=0;PQA=0;PQR=0;PRO=0;QA=3241;QR=25565;RO=761;RPL=95;RPP=209.3;RPPR=1655.5;RPR=0;RUN=1;SAF=95;SAP=209.3;SAR=0;SRF=761;SRP=1655.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:119:119,0:119:4017:0:0:0,-35.8226,-361.744 0/0:178:177,1:177:5834:1:35:0,-50.0847,-521.715 0/0:95:90,5:90:3023:5:172:0,-12.7794,-256.498 0/0:189:189,0:189:6370:0:0:0,-56.8947,-573.44 0/1:125:87,38:87:2929:38:1291:-78.8599,0,-226.226 0/1:151:99,51:99:3392:51:1743:-111.926,0,-260.286 dDocent_Contig_5234 209 . N G 1389.22 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=41;CIGAR=1X;DP=41;DPB=41;DPRA=0;EPP=92.0407;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1517;QR=0;RO=0;RPL=41;RPP=92.0407;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=92.0407;SAR=41;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:10:0,10:0:0:10:372:-33.8279,-3.0103,0 1/1:4:0,4:0:0:4:121:-11.1865,-1.20412,0 1/1:3:0,3:0:0:3:106:-9.88821,-0.90309,0 1/1:12:0,12:0:0:12:456:-41.3894,-3.61236,0 1/1:12:0,12:0:0:12:462:-41.931,-3.61236,0 dDocent_Contig_5235 74 . A T 417.508 . AB=0.180617;ABP=204.135;AC=2;AF=0.166667;AN=12;AO=55;CIGAR=1X;DP=697;DPB=697;DPRA=0.934156;EPP=122.441;EPPR=1394.92;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1677;QR=20502;RO=641;RPL=55;RPP=122.441;RPPR=1394.92;RPR=0;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=641;SRP=1394.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:118:106,12:106:3360:12:372:0,-1.74064,-268.849 0/0:115:115,0:115:3670:0:0:0,-34.6184,-330.529 0/1:143:119,23:119:3876:23:711:-21.1892,0,-305.965 0/0:128:128,0:128:4067:0:0:0,-38.5318,-366.253 0/1:84:66,18:66:2153:18:542:-23.7835,0,-168.753 0/0:109:107,2:107:3376:2:52:0,-27.8727,-299.13 dDocent_Contig_5236 40 . A C 563.511 . AB=0.234234;ABP=71.1085;AC=1;AF=0.0833333;AN=12;AO=31;CIGAR=1X;DP=916;DPB=916;DPRA=0.880503;EPP=70.3259;EPPR=1922.59;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.932127;PAO=0;PQA=0;PQR=0;PRO=0;QA=1207;QR=33314;RO=884;RPL=0;RPP=70.3259;RPPR=1922.59;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=884;SRP=1922.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:195:195,0:195:7321:0:0:0,-58.7008,-658.705 0/0:169:164,5:164:6275:5:196:0,-32.861,-546.631 0/0:144:144,0:144:5415:0:0:0,-43.3483,-487.323 0/0:193:193,0:193:7301:0:0:0,-58.0988,-656.904 0/0:104:103,0:103:3826:0:0:0,-31.0061,-344.029 0/1:111:85,26:85:3176:26:1011:-57.8739,0,-252.555 dDocent_Contig_5237 32 . C T 24335 . AB=0.175896;ABP=563.222;AC=3;AF=0.25;AN=12;AO=108;CIGAR=5M1X1M1I1X4M;DP=1221;DPB=1249.75;DPRA=0;EPP=237.529;EPPR=461.191;GTI=0;LEN=1;MEANALT=5.25;MQM=59.75;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0.990741;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4261;QR=8399;RO=211;RPL=0;RPP=237.529;RPPR=461.191;RPR=108;RUN=1;SAF=108;SAP=237.529;SAR=0;SRF=211;SRP=461.191;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:106:21,0,2,12,69:21:837:0,2,12,69:0,81,481,2752:-220.31,-226.632,-295.559,-219.953,-288.88,-288.278,-187.003,-255.93,-249.251,-252.318,0,-68.9253,-62.2459,-29.2964,-48.1542 1|0:166:18,0,8,34,103:18:704:0,8,34,103:0,315,1305,4090:-380.478,-385.897,-443.776,-359.984,-417.864,-415.455,-278.804,-336.683,-310.77,-326.448,-49.2104,-107.092,-81.1784,0,-76.0862 1|0:165:17,0,10,31,97:17:682:0,10,31,97:0,401,1246,3862:-359.261,-364.379,-420.573,-331.34,-387.533,-384.523,-261.791,-317.985,-284.946,-308.653,-46.3934,-102.587,-69.5476,0,-73.3866 1|0:177:5,12,29,31,99:5:202:12,29,31,99:467,1144,1229,3946:-407.935,-371.061,-384.102,-315.321,-293.595,-323.244,-308.285,-286.559,-230.819,-315.606,-84.5031,-62.7778,-7.03686,0,-71.355 0|0:247:85,0,32,0,125:85:3378:0,32,0,125:0,1256,0,5024:-388.415,-414.002,-692.111,-310.712,-588.819,-579.186,-414.002,-692.111,-588.819,-692.111,0,-278.111,-174.82,-278.111,-240.482 0|0:360:65,0,140,0,143:65:2596:0,140,0,143:0,5498,0,5702:-688.326,-707.893,-921.711,-255.736,-469.553,-427.409,-707.893,-921.711,-469.553,-921.711,-238.337,-452.156,0,-452.156,-409.109 dDocent_Contig_5238 24 . C T 3590.99 . AB=0.238671;ABP=395.699;AC=5;AF=0.416667;AN=12;AO=162;CIGAR=1X;DP=752;DPB=752;DPRA=0;EPP=354.789;EPPR=1284.18;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.981356;PAO=0;PQA=0;PQR=0;PRO=0;QA=6455;QR=23603;RO=590;RPL=0;RPP=354.789;RPPR=1284.18;RPR=162;RUN=1;SAF=162;SAP=354.789;SAR=0;SRF=590;SRP=1284.18;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:90:86,4:86:3413:4:163:0,-12.0343,-292.155 0/1:170:137,33:137:5504:33:1317:-67.6165,0,-444.005 0/1:49:36,13:36:1447:13:518:-32.2146,0,-115.723 0/1:144:130,14:130:5225:14:531:-4.77061,0,-426.749 0/1:134:100,34:100:3992:34:1349:-81.3319,0,-318.926 0/1:165:101,64:101:4022:64:2577:-182.387,0,-312.298 dDocent_Contig_5239 8 . G A 651.165 . AB=0.263636;ABP=56.389;AC=2;AF=0.166667;AN=12;AO=30;CIGAR=1X;DP=319;DPB=319;DPRA=0.99375;EPP=68.1545;EPPR=630.566;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.733333;PAIREDR=0.553633;PAO=0;PQA=0;PQR=0;PRO=0;QA=1159;QR=11064;RO=289;RPL=0;RPP=68.1545;RPPR=630.566;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=289;SRP=630.566;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:38,0:38:1461:0:0:0,-11.4391,-131.768 0/0:49:48,1:48:1825:1:38:0,-10.9532,-160.705 0/0:54:54,0:54:2079:0:0:0,-16.2556,-187.341 0/0:68:68,0:68:2601:0:0:0,-20.47,-234.284 0/1:53:48,5:48:1843:5:194:-1.87825,0,-150.165 0/1:57:33,24:33:1255:24:927:-66.5879,0,-96.0838 dDocent_Contig_5240 22 . T A 1862.02 . AB=0.17101;ABP=580.24;AC=2;AF=0.166667;AN=12;AO=114;CIGAR=1X;DP=1182;DPB=1182;DPRA=1.68889;EPP=250.558;EPPR=2311.29;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.991228;PAIREDR=0.971884;PAO=0;PQA=0;PQR=0;PRO=0;QA=4494;QR=42501;RO=1067;RPL=0;RPP=250.558;RPPR=2319.97;RPR=114;RUN=1;SAF=114;SAP=250.558;SAR=0;SRF=1066;SRP=2311.29;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:136:135,1:135:5385:1:41:0,-36.8455,-480.392 0/0:162:154,8:154:6105:8:301:0,-21.3218,-521.793 0/0:139:139,0:139:5564:0:0:0,-41.8432,-500.583 0/0:131:131,0:131:5231:0:0:0,-39.4349,-470.64 0/1:292:224,68:224:8920:68:2684:-153.791,0,-714.4 0/1:322:284,37:284:11296:37:1468:-35.6329,0,-919.155 dDocent_Contig_5242 107 . N T 91.4383 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=98;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:98:-9.14329,-0.90309,0 ./.:.:.:.:.:.:.:. dDocent_Contig_5244 8 . G A 642.67 . AB=0.158915;ABP=263.722;AC=1;AF=0.0833333;AN=12;AO=65;CIGAR=1X;DP=1394;DPB=1394;DPRA=0.644499;EPP=144.156;EPPR=2888.9;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2482;QR=50709;RO=1329;RPL=0;RPP=144.156;RPPR=2888.9;RPR=65;RUN=1;SAF=65;SAP=144.156;SAR=0;SRF=1329;SRP=2888.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:143:138,5:138:5248:5:187:0,-25.8556,-455.132 0/0:207:203,4:203:7685:4:134:0,-49.9266,-679.093 0/1:258:217,41:217:8306:41:1591:-65.7899,0,-669.649 0/0:177:162,15:162:6142:15:570:0,-1.64135,-501.081 0/0:311:311,0:311:11916:0:0:0,-93.6203,-1071.94 0/0:298:298,0:298:11412:0:0:0,-89.7069,-1026.63 dDocent_Contig_5245 1 . N G 110.027 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=118;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:118:-11.0022,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5246 16 . A T 116.715 . AB=0.16;ABP=53.2147;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=169;DPB=169;DPRA=0.840336;EPP=20.3821;EPPR=352.617;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.540373;PAO=0;PQA=0;PQR=0;PRO=0;QA=324;QR=6408;RO=161;RPL=0;RPP=20.3821;RPPR=352.617;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=161;SRP=352.617;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:1168:0:0:0,-8.72987,-105.395 0/0:33:33,0:33:1297:0:0:0,-9.93399,-116.996 0/1:16:14,2:14:563:2:82:-2.9632,0,-46.1953 0/1:34:28,6:28:1117:6:242:-11.9223,0,-90.5786 0/0:19:19,0:19:771:0:0:0,-5.71957,-69.7102 0/0:38:38,0:38:1492:0:0:0,-11.4391,-134.515 dDocent_Contig_5247 12 . G A 20888.6 . AB=0.440719;ABP=53.9866;AC=6;AF=0.5;AN=12;AO=736;CIGAR=1X;DP=1670;DPB=1670;DPRA=0;EPP=1601.21;EPPR=2028.99;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.9755;MQMR=59.9946;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0991848;PAIREDR=0.00107181;PAO=0;PQA=0;PQR=0;PRO=0;QA=28926;QR=36565;RO=933;RPL=0;RPP=1601.21;RPPR=2028.99;RPR=736;RUN=1;SAF=736;SAP=1601.21;SAR=0;SRF=933;SRP=2028.99;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:248:113,135:113:4409:135:5265:-399.094,0,-322.141 0/1:309:147,161:147:5767:161:6316:-475.121,0,-425.782 0/1:218:85,133:85:3337:133:5235:-405.414,0,-234.783 0/1:327:154,173:154:6088:173:6800:-513.31,0,-449.3 0/1:263:185,78:185:7236:78:3073:-197.455,0,-571.782 0/1:305:249,56:249:9728:56:2237:-109.688,0,-783.223 dDocent_Contig_5248 40 . G A 146.918 . AB=0.127119;ABP=145.518;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=383;DPB=383;DPRA=0.890566;EPP=35.5824;EPPR=799.941;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.933333;PAIREDR=0.776567;PAO=0;PQA=0;PQR=0;PRO=0;QA=585;QR=14037;RO=367;RPL=0;RPP=35.5824;RPPR=799.941;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=367;SRP=799.941;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:43:39,4:39:1500:4:157:-1.56421,0,-122.316 0/0:79:79,0:79:3005:0:0:0,-23.7814,-270.595 0/0:57:57,0:57:2201:0:0:0,-17.1587,-198.299 0/1:75:63,11:63:2424:11:428:-16.1889,0,-195.664 0/0:53:53,0:53:2005:0:0:0,-15.9546,-180.674 0/0:76:76,0:76:2902:0:0:0,-22.8783,-261.337 dDocent_Contig_5249 42 . T C 2075.37 . AB=0.247887;ABP=198.999;AC=4;AF=0.333333;AN=12;AO=92;CIGAR=1X;DP=458;DPB=458;DPRA=0;EPP=177.578;EPPR=797.769;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.771739;PAIREDR=0.901639;PAO=0;PQA=0;PQR=0;PRO=0;QA=3724;QR=14667;RO=366;RPL=0;RPP=202.786;RPPR=797.769;RPR=92;RUN=1;SAF=89;SAP=177.578;SAR=3;SRF=366;SRP=797.769;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:47,1:47:1847:1:41:0,-10.3549,-162.332 0/1:100:80,20:80:3207:20:812:-43.2908,0,-258.583 0/0:55:52,3:52:2100:3:123:0,-5.09186,-177.708 0/1:95:73,22:73:2915:22:886:-51.4506,0,-233.846 0/1:73:56,17:56:2254:17:688:-40.2743,0,-181.044 0/1:87:58,29:58:2344:29:1174:-79.7435,0,-184.916 dDocent_Contig_5250 8 . G T 624.246 . AB=0.107301;ABP=1213.89;AC=1;AF=0.0833333;AN=12;AO=97;CIGAR=1X;DP=3649;DPB=3649;DPRA=1.64663;EPP=213.643;EPPR=7713.91;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999437;PAO=0;PQA=0;PQR=0;PRO=0;QA=3733;QR=135818;RO=3551;RPL=0;RPP=213.643;RPPR=7713.91;RPR=97;RUN=1;SAF=97;SAP=213.643;SAR=0;SRF=3551;SRP=7713.91;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:418:418,0:418:16020:0:0:0,-125.831,-1441.02 0/0:569:569,0:569:21775:0:0:0,-171.286,-1958.56 0/0:376:376,0:376:14389:0:0:0,-113.187,-1294.35 0/0:727:726,0:726:27818:0:0:0,-218.548,-2501.88 0/0:655:655,0:655:24999:0:0:0,-197.175,-2248.5 0/1:904:807,97:807:30817:97:3733:-63.9475,0,-2499.56 dDocent_Contig_5251 98 . N G 581.303 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=19;CIGAR=2X;DP=19;DPB=22.5;DPRA=0;EPP=44.2683;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=2;PQA=68;PQR=0;PRO=0;QA=639;QR=0;RO=0;RPL=19;RPP=44.2683;RPPR=0;RPR=0;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:18:0,18:0:0:18:605:-54.4291,-5.41854,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 dDocent_Contig_5253 98 . N T 142.31 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=143;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:47:-4.46457,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:62:-5.88894,-0.60206,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5254 15 . T A 21467.5 . AB=0.612179;ABP=139.423;AC=6;AF=0.5;AN=12;AO=764;CIGAR=3X3M1X;DP=1248;DPB=1248;DPRA=0;EPP=1662.02;EPPR=1040.97;GTI=0;LEN=1;MEANALT=2;MQM=41.2081;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=30103;QR=18850;RO=478;RPL=0;RPP=1662.02;RPPR=1040.97;RPR=764;RUN=1;SAF=764;SAP=1662.02;SAR=0;SRF=478;SRP=1040.97;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:159:38,120:38:1461:120:4708:-342.867,0,-83.8156 0|1:211:74,136:74:2925:136:5350:-386.273,0,-199.912 0|1:236:83,153:83:3288:153:6058:-439.582,0,-224.957 0|1:326:88,235:88:3492:235:9235:-688.787,0,-216.733 0|1:216:128,88:128:5059:88:3478:-223.698,0,-390.208 0|1:100:67,32:67:2625:32:1274:-76.7621,0,-206.202 dDocent_Contig_5255 67 . T G 70630.9 . AB=0.602964;ABP=183.218;AC=8;AF=0.666667;AN=12;AO=2235;CIGAR=1X;DP=3064;DPB=3064;DPRA=0;EPP=4856.25;EPPR=1796.65;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=87181;QR=32516;RO=826;RPL=2235;RPP=4856.25;RPPR=1796.65;RPR=0;RUN=1;SAF=2235;SAP=4856.25;SAR=0;SRF=826;SRP=1796.65;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:425:28,397:28:1109:397:15461:-1290.34,-27.8445,0 0/1:611:63,546:63:2493:546:21331:-1734.66,0,-41.0131 0/1:267:38,229:38:1498:229:8954:-724.999,0,-54.6941 1/1:682:23,658:23:900:658:25729:-2232.26,-123.793,0 0/1:574:340,234:340:13405:234:9108:-646.459,0,-1032.74 0/1:505:334,171:334:13111:171:6598:-441.582,0,-1027.08 dDocent_Contig_5256 10 . G A 216.039 . AB=0.112971;ABP=313.967;AC=1;AF=0.0833333;AN=12;AO=59;CIGAR=1X;DP=1701;DPB=1701;DPRA=1.16964;EPP=131.127;EPPR=3566.4;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997562;PAO=0;PQA=0;PQR=0;PRO=0;QA=2273;QR=63538;RO=1641;RPL=0;RPP=131.127;RPPR=3566.4;RPR=59;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=1641;SRP=3566.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:164:164,0:164:6379:0:0:0,-49.3689,-573.953 0/1:239:212,27:212:8197:27:1053:-23.1268,0,-665.491 0/0:298:298,0:298:11540:0:0:0,-89.7069,-1038.03 0/0:298:277,21:277:10710:21:792:0,-18.1074,-891.794 0/0:322:321,0:321:12476:0:0:0,-96.6306,-1121.82 0/0:380:369,11:369:14236:11:428:0,-75.517,-1241.58 dDocent_Contig_5257 172 . G T 95.4804 . AB=0.11215;ABP=142.817;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=1X;DP=519;DPB=519;DPRA=1.28966;EPP=57.2971;EPPR=1075.72;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.92;PAIREDR=0.937247;PAO=0;PQA=0;PQR=0;PRO=0;QA=994;QR=19551;RO=494;RPL=25;RPP=57.2971;RPPR=1075.72;RPR=0;RUN=1;SAF=0;SAP=57.2971;SAR=25;SRF=0;SRP=1075.72;SRR=494;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:75:75,0:75:3009:0:0:0,-22.5772,-270.897 0/0:101:98,3:98:3883:3:120:0,-19.2163,-338.292 0/0:70:70,0:70:2759:0:0:0,-21.0721,-248.425 0/0:69:64,5:64:2550:5:197:0,-2.66704,-211.537 0/0:97:92,5:92:3601:5:200:0,-10.82,-305.754 0/1:107:95,12:95:3749:12:477:-11.0709,0,-305.229 dDocent_Contig_5259 25 . T C 292.565 . AB=0.112676;ABP=373.078;AC=1;AF=0.0833333;AN=12;AO=96;CIGAR=1X;DP=2865;DPB=2865;DPRA=0.888081;EPP=211.472;EPPR=6015.82;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9993;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.999278;PAO=0;PQA=0;PQR=0;PRO=0;QA=3810;QR=110496;RO=2769;RPL=0;RPP=211.472;RPPR=6015.82;RPR=96;RUN=1;SAF=96;SAP=211.472;SAR=0;SRF=2769;SRP=6015.82;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:483:461,22:461:18407:22:874:0,-66.4285,-1576.12 0/0:457:457,0:457:18232:0:0:0,-137.571,-1639.36 0/1:284:252,32:252:10042:32:1289:-30.7794,0,-817.623 0/0:558:543,15:543:21632:15:579:0,-115.54,-1892.56 0/0:508:481,27:481:19155:27:1068:0,-56.5217,-1625.96 0/0:575:575,0:575:23028:0:0:0,-173.092,-2070.49 dDocent_Contig_5260 95 . T G 3986.1 . AB=0.153662;ABP=2620.19;AC=3;AF=0.25;AN=12;AO=582;CIGAR=1X;DP=4881;DPB=4881;DPRA=0;EPP=1266.81;EPPR=9322.97;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=19403;QR=138187;RO=4292;RPL=582;RPP=1266.81;RPPR=9322.97;RPR=0;RUN=1;SAF=582;SAP=1266.81;SAR=0;SRF=4292;SRP=9322.97;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:667:601,66:601:19334:66:2189:0,-3.50937,-1542.64 0/1:805:698,105:698:22447:105:3508:-73.8825,0,-1777.93 0/0:712:661,50:661:21531:50:1708:0,-60.3736,-1783.56 0/1:758:643,115:643:20712:115:3857:-119.173,0,-1635.72 0/1:949:780,166:780:24850:166:5507:-210.776,0,-1951.2 0/0:990:909,80:909:29313:80:2634:0,-60.7417,-2400.46 dDocent_Contig_5261 11 . C A 51.1211 . AB=0.112903;ABP=83.705;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=408;DPB=408;DPRA=0.878378;EPP=33.4109;EPPR=858.57;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.939086;PAO=0;PQA=0;PQR=0;PRO=0;QA=528;QR=15795;RO=394;RPL=0;RPP=33.4109;RPPR=858.57;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=394;SRP=858.57;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:64:64,0:64:2582:0:0:0,-19.2659,-232.504 0/0:84:84,0:84:3320:0:0:0,-25.2865,-298.862 0/0:64:63,1:63:2541:1:40:0,-15.2702,-224.82 0/0:49:45,4:45:1811:4:139:0,-1.9052,-150.353 0/1:62:55,7:55:2209:7:277:-6.63498,0,-180.311 0/0:85:83,2:83:3332:2:72:0,-18.7512,-293.095 dDocent_Contig_5263 1 . N G 118.949 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=120;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 1/1:2:0,2:0:0:2:79:-7.49763,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5264 107 . N A 204.455 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=0.5;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=209;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:105:-9.79616,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_5265 34 . T C 1671.19 . AB=0.141104;ABP=914.829;AC=3;AF=0.25;AN=12;AO=135;CIGAR=1X;DP=1650;DPB=1650;DPRA=0.867961;EPP=296.159;EPPR=3271.1;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995373;PAO=0;PQA=0;PQR=0;PRO=0;QA=5424;QR=60515;RO=1513;RPL=0;RPP=296.159;RPPR=3288.45;RPR=135;RUN=1;SAF=135;SAP=296.159;SAR=0;SRF=1511;SRP=3271.1;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:216:210,6:210:8408:6:238:0,-43.2292,-734.442 0/1:352:286,66:286:11444:66:2661:-133.643,0,-923.18 0/1:136:115,21:115:4637:21:837:-34.7032,0,-376.289 0/1:327:299,28:299:11941:28:1135:-3.99302,0,-975.405 0/0:310:295,14:295:11831:14:553:0,-43.3079,-1013.8 0/0:309:308,0:308:12254:0:0:0,-92.7172,-1101.57 dDocent_Contig_5266 42 . A G 343.228 . AB=0.109948;ABP=507.815;AC=1;AF=0.0833333;AN=12;AO=157;CIGAR=1X2M2X;DP=2277;DPB=2278.4;DPRA=0;EPP=343.931;EPPR=4571.79;GTI=0;LEN=1;MEANALT=3;MQM=55.1019;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.802548;PAIREDR=0.999049;PAO=0;PQA=0;PQR=0;PRO=0;QA=6223;QR=83060;RO=2104;RPL=0;RPP=343.931;RPPR=4571.79;RPR=157;RUN=1;SAF=157;SAP=343.931;SAR=0;SRF=2104;SRP=4571.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:241:217,20:217:8527:20:771:0,-5.86409,-701.151 0|1:382:336,42:336:13267:42:1674:-35.8456,0,-1079.01 0|0:179:167,12:167:6617:12:482:0,-10.8858,-552.288 0|0:373:342,29:342:13458:29:1148:0,-13.9144,-1112.18 0|0:590:573,15:573:22642:15:602:0,-123.451,-1982.08 0|0:512:469,39:469:18549:39:1546:0,-14.9328,-1529.75 dDocent_Contig_5268 8 . G A 2111.2 . AB=0.153518;ABP=981.099;AC=2;AF=0.166667;AN=12;AO=174;CIGAR=1X;DP=2136;DPB=2136;DPRA=2.41008;EPP=380.846;EPPR=4263.44;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6656;QR=75029;RO=1962;RPL=0;RPP=380.846;RPPR=4263.44;RPR=174;RUN=1;SAF=174;SAP=380.846;SAR=0;SRF=1962;SRP=4263.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:451:362,89:362:13839:89:3425:-172.612,0,-1109.12 0/1:487:432,55:432:16501:55:2090:-41.7291,0,-1337.69 0/0:375:361,14:361:13880:14:527:0,-65.1165,-1200.79 0/0:456:440,16:440:16916:16:614:0,-81.6699,-1465.97 0/0:95:95,0:95:3603:0:0:0,-28.5978,-324.395 0/0:272:272,0:272:10290:0:0:0,-81.8802,-925.749 dDocent_Contig_5269 68 . C T 2360.37 . AB=0.248106;ABP=294.004;AC=4;AF=0.333333;AN=12;AO=146;CIGAR=1X;DP=756;DPB=756;DPRA=0;EPP=320.045;EPPR=1327.61;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.985246;PAO=0;PQA=0;PQR=0;PRO=0;QA=4935;QR=23865;RO=610;RPL=146;RPP=320.045;RPPR=1327.61;RPR=0;RUN=1;SAF=146;SAP=320.045;SAR=0;SRF=610;SRP=1327.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:102:97,5:97:3829:5:170:0,-15.0718,-328.991 0/1:138:99,39:99:3851:39:1366:-81.6897,0,-305.074 0/1:74:58,16:58:2236:16:544:-27.0009,0,-179.142 0/0:126:116,10:116:4607:10:309:0,-9.82274,-386.463 0/1:147:124,23:124:4770:23:740:-22.6417,0,-384.99 0/1:169:116,53:116:4572:53:1806:-111.926,0,-360.55 dDocent_Contig_5270 22 . C A 89939 . AB=0.78748;ABP=1803.36;AC=8;AF=0.666667;AN=12;AO=2806;CIGAR=1X;DP=3399;DPB=3399;DPRA=0;EPP=6096.16;EPPR=1286.35;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=110931;QR=23630;RO=591;RPL=0;RPP=6096.16;RPPR=1286.35;RPR=2806;RUN=1;SAF=2806;SAP=6096.16;SAR=0;SRF=591;SRP=1286.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:335:21,314:21:849:314:12432:-1041.33,-24.1233,0 0/1:511:85,425:85:3423:425:16795:-1356.4,0,-154.182 1/1:556:39,517:39:1579:517:20352:-1687.8,-25.0314,0 0/1:607:102,505:102:4080:505:20044:-1619.63,0,-184.439 0/1:634:140,494:140:5606:494:19529:-1565.26,0,-313.483 0/1:756:204,551:204:8093:551:21779:-1730.7,0,-500.233 dDocent_Contig_5271 30 . G A 162.767 . AB=0.150685;ABP=80.3802;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=478;DPB=478;DPRA=1.0641;EPP=29.068;EPPR=1014.92;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=0.886266;PAO=0;PQA=0;PQR=0;PRO=0;QA=479;QR=18408;RO=466;RPL=0;RPP=29.068;RPPR=1014.92;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=466;SRP=1014.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:53:53,0:53:2107:0:0:0,-15.9546,-189.823 0/0:86:86,0:86:3424:0:0:0,-25.8886,-308.2 0/0:93:92,1:92:3591:1:41:0,-23.9012,-319.13 0/0:108:108,0:108:4259:0:0:0,-32.5112,-383.284 0/0:65:65,0:65:2570:0:0:0,-19.5669,-231.433 0/1:73:62,11:62:2457:11:438:-17.7995,0,-199.306 dDocent_Contig_5272 125 . C G 63.8407 . AB=0.138889;ABP=43.7857;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=135;DPB=135;DPRA=1.97059;EPP=16.0391;EPPR=274.512;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=0.666667;PAIREDR=0.775194;PAO=0;PQA=0;PQR=0;PRO=0;QA=212;QR=5086;RO=129;RPL=6;RPP=16.0391;RPPR=274.512;RPR=0;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=283.13;SRR=129;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:683:0:0:0,-5.11751,-61.7956 0/0:31:30,1:30:1182:1:8:0,-8.53193,-105.844 0/0:11:11,0:11:421:0:0:0,-3.31133,-38.2287 0/0:20:20,0:20:809:0:0:0,-6.0206,-73.1255 0/1:36:31,5:31:1211:5:204:-7.90695,0,-98.4289 0/0:20:20,0:20:780:0:0:0,-6.0206,-70.5141 dDocent_Contig_5273 51 . C A 46.5531 . AB=0.102362;ABP=177.429;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=341;DPB=341;DPRA=1.07927;EPP=33.4109;EPPR=713.082;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.700306;PAO=0;PQA=0;PQR=0;PRO=0;QA=545;QR=12994;RO=327;RPL=14;RPP=33.4109;RPPR=713.082;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=327;SRP=713.082;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1302:0:0:0,-9.93399,-117.442 0/1:62:55,7:55:2181:7:262:-5.26889,0,-177.805 0/1:65:59,6:59:2361:6:242:-2.59,0,-193.076 0/0:50:49,1:49:1924:1:41:0,-10.9569,-169.268 0/0:76:76,0:76:3048:0:0:0,-22.8783,-274.403 0/0:55:55,0:55:2178:0:0:0,-16.5566,-196.196 dDocent_Contig_5274 7 . A T 56251.9 . AB=0.144125;ABP=2109.59;AC=1;AF=0.0833333;AN=12;AO=276;CIGAR=1X1M1X;DP=3166;DPB=3166;DPRA=0;EPP=602.337;EPPR=1744.53;GTI=0;LEN=1;MEANALT=3.66667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10378;QR=30145;RO=802;RPL=0;RPP=602.337;RPPR=1744.53;RPR=276;RUN=1;SAF=276;SAP=602.337;SAR=0;SRF=802;SRP=1744.53;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:431:158,0,82,190:158:5919:0,82,190:0,3091,7146:-537.881,-585.443,-1070.22,-332.147,-816.923,-792.238,0,-484.776,-231.479,-427.58 0|0:555:182,13,79,280:182:6843:13,79,280:492,3003,10642:-817.95,-832.403,-1389.14,-626.456,-1146.77,-1163.32,0,-520.311,-314.362,-476.357 0|0:261:90,0,51,120:90:3396:0,51,120:0,1936,4590:-349.556,-376.649,-654.974,-217.896,-496.221,-480.868,0,-278.325,-119.571,-242.202 0|0:559:186,0,88,285:186:7024:0,88,285:0,3349,10779:-827.574,-883.566,-1459.27,-608.879,-1184.59,-1158.1,0,-575.707,-301.02,-489.913 1|0:720:63,171,0,486:63:2344:171,0,486:6444,0,18498:-1834.44,-1325.34,-1465.72,-1853.4,-1517.19,-2045.25,-336.215,0,-528.064,-381.763 0|0:640:123,92,2,421:123:4619:92,2,421:3442,76,15932:-1269.01,-1024.18,-1374.87,-1299.8,-1396.34,-1677.59,0,-96.5323,-372.158,-251.658 dDocent_Contig_5275 172 . T G 242.649 . AB=0.128049;ABP=200.085;AC=2;AF=0.166667;AN=12;AO=30;CIGAR=1X;DP=579;DPB=579;DPRA=1.29762;EPP=68.1545;EPPR=1192.98;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1170;QR=20746;RO=548;RPL=30;RPP=68.1545;RPPR=1192.98;RPR=0;RUN=1;SAF=0;SAP=68.1545;SAR=30;SRF=0;SRP=1192.98;SRR=548;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:83:74,9:74:2800:9:361:-7.86839,0,-227.174 0/0:163:154,9:154:5838:9:324:0,-19.5797,-495.853 0/1:81:69,12:69:2628:12:485:-19.6184,0,-212.315 0/0:145:144,0:144:5479:0:0:0,-43.3483,-492.675 0/0:67:67,0:67:2468:0:0:0,-20.169,-222.281 0/0:40:40,0:40:1533:0:0:0,-12.0412,-138.228 dDocent_Contig_5276 9 . T G 358.029 . AB=0.106457;ABP=773.83;AC=1;AF=0.0833333;AN=12;AO=80;CIGAR=1X;DP=4006;DPB=4006;DPRA=1.37407;EPP=176.728;EPPR=8515.18;GTI=0;LEN=1;MEANALT=1.6;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998724;PAO=0;PQA=0;PQR=0;PRO=0;QA=3052;QR=144622;RO=3920;RPL=0;RPP=176.728;RPPR=8515.18;RPR=80;RUN=1;SAF=80;SAP=176.728;SAR=0;SRF=3920;SRP=8515.18;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:644:636,8:636:23312:8:318:0,-164.876,-2068.09 0/0:887:884,1:884:32618:1:10:0,-265.6,-2932.87 0/0:471:468,1:468:17413:1:40:0,-137.584,-1562.47 0/0:922:913,9:913:33519:9:354:0,-245.328,-2982.89 0/0:509:508,0:508:18854:0:0:0,-152.923,-1695.98 0/1:573:511,61:511:18906:61:2330:-37.3258,0,-1528.18 dDocent_Contig_5277 15 . T A 88.6057 . AB=0.088968;ABP=827.722;AC=1;AF=0.0833333;AN=12;AO=88;CIGAR=1X;DP=2698;DPB=2698;DPRA=1.18414;EPP=194.1;EPPR=5670.55;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3493;QR=103907;RO=2610;RPL=0;RPP=194.1;RPPR=5670.55;RPR=88;RUN=1;SAF=88;SAP=194.1;SAR=0;SRF=2610;SRP=5670.55;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:365:360,5:360:14269:5:199:0,-91.5885,-1264.88 0/1:562:512,50:512:20404:50:1993:-10.3834,0,-1665.45 0/0:346:337,9:337:13372:9:360:0,-71.394,-1169.76 0/0:624:600,24:600:23989:24:941:0,-102.847,-2071.89 0/0:425:425,0:425:16895:0:0:0,-127.938,-1519.23 0/0:376:376,0:376:14978:0:0:0,-113.187,-1346.88 dDocent_Contig_5278 7 . A C 460.754 . AB=0.136223;ABP=374.278;AC=3;AF=0.25;AN=12;AO=56;CIGAR=1X;DP=563;DPB=563;DPRA=0;EPP=124.613;EPPR=1101.78;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990119;PAO=0;PQA=0;PQR=0;PRO=0;QA=2065;QR=19004;RO=506;RPL=0;RPP=124.613;RPPR=1101.78;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=506;SRP=1101.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:64:61,3:61:2300:3:116:0,-8.44821,-196.408 0/1:118:98,19:98:3699:19:693:-27.3546,0,-297.709 0/1:81:74,7:74:2820:7:272:-0.463799,0,-229.601 0/0:87:82,5:82:3073:5:188:0,-8.9064,-259.458 0/0:89:85,4:85:3175:4:141:0,-13.7582,-272.89 0/1:124:106,18:106:3937:18:655:-21.9406,0,-317.128 dDocent_Contig_5279 29 . C T 5269.22 . AB=0.195604;ABP=1101.57;AC=2;AF=0.166667;AN=12;AO=323;CIGAR=1X;DP=3284;DPB=3284;DPRA=2.08056;EPP=704.396;EPPR=6428.4;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999324;PAO=0;PQA=0;PQR=0;PRO=0;QA=12631;QR=116439;RO=2959;RPL=0;RPP=704.396;RPPR=6428.4;RPR=323;RUN=1;SAF=323;SAP=704.396;SAR=0;SRF=2959;SRP=6428.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:406:403,1:403:15951:1:39:0,-118.056,-1430.67 0/0:540:494,46:494:19374:46:1778:0,-2.30036,-1581.94 0/0:288:288,0:288:11309:0:0:0,-86.6966,-1017.14 0/0:685:676,9:676:26662:9:356:0,-173.803,-2365.01 0/1:659:498,161:498:19491:161:6313:-369.616,0,-1554.4 0/1:706:600,106:600:23652:106:4145:-160.528,0,-1914.31 dDocent_Contig_5280 59 . T A 199.557 . AB=0.158537;ABP=86.0559;AC=2;AF=0.166667;AN=12;AO=18;CIGAR=1X;DP=274;DPB=274;DPRA=1.48551;EPP=42.0968;EPPR=558.907;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.972656;PAO=0;PQA=0;PQR=0;PRO=0;QA=693;QR=10202;RO=256;RPL=18;RPP=42.0968;RPPR=558.907;RPR=0;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=256;SRP=558.907;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:34,0:34:1356:0:0:0,-10.235,-122.3 0/0:35:35,0:35:1400:0:0:0,-10.536,-126.257 0/1:39:30,9:30:1199:9:365:-21.4747,0,-96.4366 0/0:48:46,2:46:1831:2:81:0,-6.76371,-157.322 0/1:43:39,4:39:1534:4:148:-0.732491,0,-125.356 0/0:75:72,3:72:2882:3:99:0,-13.3464,-250.248 dDocent_Contig_5281 19 . C A 25502.7 . AB=0.0482788;ABP=4224.8;AC=0;AF=0;AN=12;AO=115;CIGAR=2X1M1X;DP=4227;DPB=4226.5;DPRA=0;EPP=252.73;EPPR=6482.68;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.22045e-16;PAIRED=1;PAIREDR=0.997654;PAO=0;PQA=0;PQR=0;PRO=0;QA=4541;QR=116559;RO=2984;RPL=0;RPP=252.73;RPPR=6482.68;RPR=115;RUN=1;SAF=115;SAP=252.73;SAR=0;SRF=2984;SRP=6482.68;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:509:339,32,134:339:13234:32,134:1277,5107:-316.862,-313.735,-1392,0,-982.713,-1047.55 0|0:805:587,32,185:587:22955:32,185:1266,7058:-402.301,-474.819,-2352.47,0,-1783.09,-1831.59 0|0:301:202,9,85:202:7886:9,85:337,3268:-207.485,-240.705,-886.257,0,-620.687,-622.688 0|0:767:529,42,185:529:20659:42,185:1661,7101:-423.606,-446.16,-2131.83,0,-1561.62,-1642.62 0|0:729:480,0,247:480:18724:0,247:0,9493:-634.863,-779.357,-2318.43,0,-1539.16,-1464.81 0|0:1116:847,0,265:847:33101:0,265:0,10132:-576.378,-831.351,-3552.59,0,-2721.24,-2641.46 dDocent_Contig_5282 56 . C A 632.858 . AB=0.236641;ABP=81.9292;AC=1;AF=0.0833333;AN=12;AO=82;CIGAR=1X;DP=1415;DPB=1415;DPRA=0;EPP=181.071;EPPR=2893.24;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993989;PAO=0;PQA=0;PQR=0;PRO=0;QA=3019;QR=50394;RO=1331;RPL=82;RPP=181.071;RPPR=2893.24;RPR=0;RUN=1;SAF=82;SAP=181.071;SAR=0;SRF=1331;SRP=2893.24;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:126:118,8:118:4467:8:306:0,-10.0289,-374.184 0/0:182:168,14:168:6349:14:499:0,-9.54996,-526.093 0/0:197:183,13:183:7025:13:497:0,-14.0365,-587.038 0/1:131:100,31:100:3778:31:1155:-64.8087,0,-300.694 0/0:310:295,15:295:11163:15:553:0,-43.2119,-954.119 0/0:469:467,1:467:17612:1:9:0,-140.192,-1583.18 dDocent_Contig_5283 35 . C T 4144.01 . AB=0.280328;ABP=258.689;AC=5;AF=0.416667;AN=12;AO=171;CIGAR=1X;DP=775;DPB=775;DPRA=0.739394;EPP=374.332;EPPR=1314.58;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.988304;PAIREDR=0.996689;PAO=0;PQA=0;PQR=0;PRO=0;QA=6733;QR=24191;RO=604;RPL=0;RPP=374.332;RPPR=1314.58;RPR=171;RUN=1;SAF=171;SAP=374.332;SAR=0;SRF=604;SRP=1314.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:77:63,14:63:2545:14:549:-26.5659,0,-205.998 0/1:155:98,57:98:3927:57:2237:-154.848,0,-306.761 0/1:131:84,47:84:3341:47:1834:-125.83,0,-261.304 0/1:131:91,40:91:3653:40:1609:-105.604,0,-289.344 0/1:116:103,13:103:4077:13:504:-10.7753,0,-331.996 0/0:165:165,0:165:6648:0:0:0,-49.6699,-597.995 dDocent_Contig_5284 16 . G C 583.674 . AB=0.144781;ABP=328.519;AC=1;AF=0.0833333;AN=12;AO=125;CIGAR=1M6I1M1X2M1X1M1X;DP=2202;DPB=2295.75;DPRA=0;EPP=274.444;EPPR=4493.62;GTI=0;LEN=1;MEANALT=2.33333;MQM=54.952;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999033;PAO=0;PQA=0;PQR=0;PRO=0;QA=4820;QR=81156;RO=2068;RPL=0;RPP=274.444;RPPR=4493.62;RPR=125;RUN=1;SAF=125;SAP=274.444;SAR=0;SRF=2068;SRP=4493.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:232:226,4:226:8876:4:154:0,-55.3227,-784.259 0|0:329:325,2:325:12767:2:78:0,-91.3117,-1141.01 0|0:445:424,17:424:16616:17:655:0,-73.8495,-1435.17 0|0:428:395,33:395:15501:33:1274:0,-14.0954,-1279.34 0|0:471:445,26:445:17467:26:1000:0,-51.659,-1480.73 0|1:297:253,43:253:9929:43:1659:-59.8903,0,-803.696 dDocent_Contig_5285 17 . C T 567.927 . AB=0.212598;ABP=94.1267;AC=2;AF=0.166667;AN=12;AO=27;CIGAR=1X;DP=291;DPB=291;DPRA=1.54878;EPP=61.6401;EPPR=576.279;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.996212;PAO=0;PQA=0;PQR=0;PRO=0;QA=1084;QR=10660;RO=264;RPL=0;RPP=61.6401;RPPR=576.279;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=264;SRP=576.279;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1425:0:0:0,-10.536,-128.495 0/0:91:91,0:91:3649:0:0:0,-27.3937,-328.412 0/0:25:25,0:25:1011:0:0:0,-7.52575,-91.2832 0/0:13:13,0:13:527:0:0:0,-3.91339,-47.7763 0/1:39:26,13:26:1059:13:529:-36.2156,0,-83.8557 0/1:88:74,14:74:2989:14:555:-23.7989,0,-242.592 dDocent_Contig_5286 107 . N C 115.6 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=113;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:43:-4.0837,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_5287 134 . T A 397.983 . AB=0.322581;ABP=19.9618;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=200;DPB=200;DPRA=0.898551;EPP=46.4397;EPPR=393.875;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=678;QR=6257;RO=180;RPL=0;RPP=46.4397;RPPR=393.875;RPR=20;RUN=1;SAF=0;SAP=46.4397;SAR=20;SRF=0;SRP=393.875;SRR=180;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:31,0:31:1092:0:0:0,-9.33193,-98.5893 0/0:54:54,0:54:1864:0:0:0,-16.2556,-168.037 0/0:25:25,0:25:893:0:0:0,-7.52575,-80.6901 0/0:28:28,0:28:967:0:0:0,-8.42884,-87.3369 0/1:23:8,15:8:284:15:500:-38.3915,0,-18.9799 0/1:39:34,5:34:1157:5:178:-4.62855,0,-92.6889 dDocent_Contig_5288 13 . T C 68.1053 . AB=0.106383;ABP=129.51;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1X;DP=552;DPB=552;DPRA=1.3253;EPP=44.2683;EPPR=1143.1;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998124;PAO=0;PQA=0;PQR=0;PRO=0;QA=769;QR=21403;RO=533;RPL=0;RPP=44.2683;RPPR=1160.41;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=531;SRP=1143.1;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:92:92,0:92:3686:0:0:0,-27.6948,-331.751 0/1:94:84,10:84:3363:10:403:-8.33341,0,-274.423 0/0:126:117,9:117:4736:9:366:0,-4.62462,-392.819 0/0:65:65,0:65:2579:0:0:0,-19.5669,-232.252 0/0:58:58,0:58:2332:0:0:0,-17.4597,-210.036 0/0:117:117,0:117:4707:0:0:0,-35.2205,-423.524 dDocent_Contig_5289 19 . G A 31632.9 . AB=0.826389;ABP=136.254;AC=11;AF=0.916667;AN=12;AO=958;CIGAR=1X1M;DP=1061;DPB=1061;DPRA=0;EPP=2083.28;EPPR=176.728;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.997912;PAIREDR=0.9875;PAO=0;PQA=0;PQR=0;PRO=0;QA=38032;QR=3142;RO=80;RPL=0;RPP=2083.28;RPPR=176.728;RPR=958;RUN=1;SAF=958;SAP=2083.28;SAR=0;SRF=80;SRP=176.728;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:144:20,5,119:20:776:5,119:185,4768:-386.815,-377.707,-439.949,0,-48.6367,-27.9401 1|1:204:15,15,174:15:592:15,174:594,6932:-569.952,-525.578,-569.772,-3.67008,-3.48922,0 1|1:116:9,0,107:9:361:0,107:0,4214:-346.38,-349.089,-378.834,-2.06523,-32.2102,0 1|1:185:11,3,171:11:436:3,171:123,6755:-568.08,-561.239,-596.222,-15.6002,-41.321,0 1|1:224:17,0,207:17:664:0,207:0,8252:-682.146,-687.264,-741.847,-7.33938,-62.3132,0 1|1:188:8,0,180:8:313:0,180:0,7111:-611.142,-613.55,-639.284,-28.0602,-54.1854,0 dDocent_Contig_5290 1 . N G 928.163 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=25;CIGAR=1X;DP=25;DPB=25;DPRA=0;EPP=57.2971;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=58.96;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1004;QR=0;RO=0;RPL=0;RPP=57.2971;RPPR=0;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:7:0,7:0:0:7:279:-24.8467,-2.10721,0 1/1:3:0,3:0:0:3:121:-11.2802,-0.90309,0 1/1:4:0,4:0:0:4:164:-15.1499,-1.20412,0 1/1:5:0,5:0:0:5:203:-18.6528,-1.50515,0 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 1/1:5:0,5:0:0:5:196:-18.0134,-1.50515,0 dDocent_Contig_5291 14 . A G 7305.85 . AB=0.506148;ABP=3.17049;AC=5;AF=0.416667;AN=12;AO=247;CIGAR=1X;DP=540;DPB=540;DPRA=1.87692;EPP=539.364;EPPR=639.252;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9821;QR=11509;RO=293;RPL=0;RPP=539.364;RPPR=639.252;RPR=247;RUN=1;SAF=247;SAP=539.364;SAR=0;SRF=293;SRP=639.252;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:52:52,0:52:2002:0:0:0,-15.6536,-180.387 0/1:73:67,6:67:2634:6:242:-0.181759,0,-215.238 0/1:120:85,35:85:3333:35:1392:-89.4147,0,-263.933 0/1:71:50,21:50:1998:21:836:-54.1817,0,-158.644 0/1:122:18,104:18:708:104:4138:-335.671,0,-27.3223 0/1:102:21,81:21:834:81:3213:-258.539,0,-44.6705 dDocent_Contig_5292 13 . T C 19830.1 . AB=0.412312;ABP=96.3121;AC=8;AF=0.666667;AN=12;AO=576;CIGAR=4M1X2M;DP=1397;DPB=1426.43;DPRA=0;EPP=1219.28;EPPR=715.253;GTI=0;LEN=1;MEANALT=4;MQM=59.9427;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.661458;PAIREDR=0.847561;PAO=0;PQA=0;PQR=0;PRO=0;QA=23133;QR=12906;RO=328;RPL=0;RPP=1253.78;RPPR=715.253;RPR=576;RUN=1;SAF=572;SAP=1219.28;SAR=4;SRF=328;SRP=715.253;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:186:40,17,43,86:40:1571:17,43,86:660,1631,3448:-276.449,-234.263,-358.357,-154.763,-229.746,-271.029,-4.51174,-79.4995,0,-107.839 0|1:216:52,28,45,91:52:2028:28,45,91:1103,1708,3653:-285.345,-210.257,-368.518,-160.947,-236.895,-314.089,0,-75.9498,-26.6405,-139.299 1|1:146:21,34,22,68:21:814:34,22,68:1335,826,2715:-260.216,-156.738,-213.372,-198.89,-155.96,-259.135,-42.9336,0,-42.1571,-89.3342 0|1:362:136,41,55,125:136:5360:41,55,125:1619,2062,5026:-373.242,-280.959,-709.603,-245.313,-553.074,-669.739,0,-307.768,-272.121,-403.363 0|1:220:53,16,52,99:53:2102:16,52,99:611,1978,4004:-314.173,-280.003,-448.22,-168.044,-290.952,-325.422,0,-122.915,-10.9554,-143.238 1|1:267:26,69,64,107:26:1031:69,64,107:2726,2414,4287:-484.806,-268.31,-332.408,-294.836,-155.384,-360.438,-139.456,0,-26.5317,-192.117 dDocent_Contig_5293 80 . A T 64170.7 . AB=0.518874;ABP=17.8465;AC=6;AF=0.5;AN=12;AO=2488;CIGAR=1X;DP=4795;DPB=4795;DPRA=0;EPP=5405.63;EPPR=4997.4;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=0.999196;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=87474;QR=88943;RO=2300;RPL=2488;RPP=5405.63;RPPR=4997.4;RPR=0;RUN=1;SAF=2488;SAP=5405.63;SAR=0;SRF=2300;SRP=4997.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:549:153,396:153:5896:396:13893:-1084.77,0,-365.25 0/1:815:283,530:283:10893:530:18554:-1424.28,0,-734.827 0/1:560:197,363:197:7516:363:13041:-1004.75,0,-507.564 0/1:872:228,641:228:8784:641:22415:-1754.89,0,-528.47 0/1:922:652,269:652:25370:269:9345:-563.496,0,-2003.95 0/1:1077:787,289:787:30484:289:10226:-596.099,0,-2417.1 dDocent_Contig_5294 9 . T A 11265.3 . AB=0.440166;ABP=32.8935;AC=6;AF=0.5;AN=12;AO=423;CIGAR=1X;DP=961;DPB=961;DPRA=0;EPP=921.543;EPPR=1169.09;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996276;PAO=0;PQA=0;PQR=0;PRO=0;QA=15844;QR=19491;RO=537;RPL=0;RPP=921.543;RPPR=1169.09;RPR=423;RUN=1;SAF=423;SAP=921.543;SAR=0;SRF=537;SRP=1169.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:144:103,41:103:3702:41:1545:-95.9738,0,-289.999 0/1:185:73,111:73:2611:111:4210:-323.201,0,-179.43 0/1:157:78,79:78:2854:79:2954:-218.767,0,-209.798 0/1:188:86,102:86:3084:102:3798:-285.345,0,-221.16 0/1:93:73,20:73:2704:20:757:-40.4608,0,-215.572 0/1:194:124,70:124:4536:70:2580:-174.002,0,-349.942 dDocent_Contig_5295 27 . G A 1158.66 . AB=0.216418;ABP=190.211;AC=6;AF=0.5;AN=12;AO=58;CIGAR=1X3M;DP=268;DPB=268;DPRA=0;EPP=128.956;EPPR=441.648;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.586207;PAIREDR=0.519802;PAO=0;PQA=0;PQR=0;PRO=0;QA=2280;QR=7819;RO=202;RPL=0;RPP=128.956;RPPR=441.648;RPR=58;RUN=1;SAF=58;SAP=128.956;SAR=0;SRF=202;SRP=441.648;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:32:25,2,5:25:988:2,5:81,197:-8.6732,-9.51666,-90.2203,0,-74.6158,-79.7905 0|1:63:48,1,14:48:1846:1,14:39,564:-32.0488,-43.2932,-194.513,0,-148.324,-147.315 0|1:42:32,1,8:32:1241:1,8:40,318:-16.5498,-22.8873,-124.533,0,-98.6513,-99.5385 0|1:40:31,1,8:31:1212:1,8:39,301:-15.3103,-21.4349,-120.791,0,-96.441,-97.2386 0|1:28:16,0,12:16:606:0,12:0,462:-33.4966,-38.313,-87.9825,0,-50.0514,-46.4391 0|1:63:50,2,11:50:1926:2,11:81,438:-21.009,-29.3803,-186.896,0,-151.43,-154.798 dDocent_Contig_5296 1 . N G 1089.96 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=34;CIGAR=1X;DP=34;DPB=34;DPRA=0;EPP=39.7976;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=3.38813e-21;PAIRED=0.147059;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1180;QR=0;RO=0;RPL=0;RPP=76.8404;RPPR=0;RPR=34;RUN=1;SAF=5;SAP=39.7976;SAR=29;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:7:0,7:0:0:7:261:-23.844,-2.10721,0 1/1:8:0,8:0:0:8:275:-25.0843,-2.40824,0 1/1:7:0,7:0:0:7:229:-20.9292,-2.10721,0 1/1:5:0,5:0:0:5:176:-16.1852,-1.50515,0 1/1:2:0,2:0:0:2:65:-6.17303,-0.60206,0 1/1:5:0,5:0:0:5:174:-16.0016,-1.50515,0 dDocent_Contig_5297 8 . G T 555.579 . AB=0.207143;ABP=107.303;AC=2;AF=0.166667;AN=12;AO=29;CIGAR=1X;DP=357;DPB=357;DPRA=1.29032;EPP=65.983;EPPR=715.253;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.689655;PAIREDR=0.466463;PAO=0;PQA=0;PQR=0;PRO=0;QA=1104;QR=12546;RO=328;RPL=0;RPP=65.983;RPPR=715.253;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=328;SRP=715.253;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:55:55,0:55:2084:0:0:0,-16.5566,-187.792 0/0:39:39,0:39:1484:0:0:0,-11.7402,-133.83 0/0:49:49,0:49:1889:0:0:0,-14.7505,-170.256 0/0:74:74,0:74:2841:0:0:0,-22.2762,-255.867 0/1:65:43,22:43:1645:22:848:-57.0761,0,-128.747 0/1:75:68,7:68:2603:7:256:-0.811294,0,-211.883 dDocent_Contig_5298 14 . T C 51691.5 . AB=0.806872;ABP=2955;AC=6;AF=0.5;AN=12;AO=2912;CIGAR=1X;DP=3609;DPB=3609;DPRA=0;EPP=6326.34;EPPR=1516.53;GTI=0;LEN=1;MEANALT=1;MQM=25.513;MQMR=49.2984;NS=6;NUMALT=1;ODDS=0;PAIRED=0.161058;PAIREDR=0.413199;PAO=0;PQA=0;PQR=0;PRO=0;QA=115435;QR=24579;RO=697;RPL=0;RPP=6326.34;RPPR=1516.53;RPR=2912;RUN=1;SAF=2912;SAP=6326.34;SAR=0;SRF=697;SRP=1516.53;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:530:123,407:123:4352:407:16139:-749.794,0,-201.517 0/1:775:208,567:208:7389:567:22507:-972.862,0,-393.578 0/1:429:92,337:92:3296:337:13364:-625.701,0,-144.245 0/1:780:136,644:136:4691:644:25540:-1132.2,0,-164.156 0/1:491:61,430:61:2118:430:17030:-750.649,0,-32.2572 0/1:604:77,527:77:2733:527:20855:-949.165,0,-60.202 dDocent_Contig_5299 14 . T G 165.467 . AB=0.0993228;ABP=620.753;AC=2;AF=0.166667;AN=12;AO=57;CIGAR=1X;DP=1815;DPB=1815;DPRA=0.601335;EPP=126.784;EPPR=3818.29;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.996016;PAO=0;PQA=0;PQR=0;PRO=0;QA=2215;QR=63225;RO=1757;RPL=0;RPP=126.784;RPPR=3818.29;RPR=57;RUN=1;SAF=57;SAP=126.784;SAR=0;SRF=1757;SRP=3818.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:259:253,6:253:9022:6:240:0,-55.9916,-789.883 0/0:289:282,7:282:10149:7:280:0,-61.4261,-887.646 0/1:169:149,20:149:5323:20:762:-18.0267,0,-428.277 0/1:274:250,24:250:8986:24:933:-1.79433,0,-726.147 0/0:311:311,0:311:11178:0:0:0,-93.6203,-1005.79 0/0:513:512,0:512:18567:0:0:0,-154.127,-1669.97 dDocent_Contig_5300 17 . G A 7987.15 . AB=0.317317;ABP=292.594;AC=2;AF=0.166667;AN=12;AO=324;CIGAR=1X;DP=2005;DPB=2005;DPRA=1.52837;EPP=706.567;EPPR=3653.26;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.998215;PAO=0;PQA=0;PQR=0;PRO=0;QA=12534;QR=67222;RO=1681;RPL=0;RPP=706.567;RPPR=3653.26;RPR=324;RUN=1;SAF=324;SAP=706.567;SAR=0;SRF=1681;SRP=3653.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:213:206,7:206:8285:7:279:0,-38.6381,-719.685 0/0:278:278,0:278:11154:0:0:0,-83.6863,-1003.07 0/0:168:168,0:168:6715:0:0:0,-50.573,-604.042 0/0:347:347,0:347:13819:0:0:0,-104.457,-1242.69 0/1:475:325,150:325:12928:150:5750:-374.411,0,-1019.58 0/1:524:357,167:357:14321:167:6505:-427.526,0,-1130.03 dDocent_Contig_5301 107 . N A 138.809 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=143;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:72:-6.83672,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:71:-6.74206,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5302 31 . T C 58.0024 . AB=0.153846;ABP=30.0702;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=183;DPB=183;DPRA=0.837209;EPP=13.8677;EPPR=389.532;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.2;PAIREDR=0.55618;PAO=0;PQA=0;PQR=0;PRO=0;QA=205;QR=7129;RO=178;RPL=0;RPP=13.8677;RPPR=389.532;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=178;SRP=389.532;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:876:0:0:0,-6.62266,-79.1428 0/1:26:22,4:22:888:4:164:-7.32312,0,-72.4004 0/0:28:27,1:27:1072:1:41:0,-4.33427,-92.6687 0/0:36:36,0:36:1438:0:0:0,-10.8371,-129.673 0/0:28:28,0:28:1129:0:0:0,-8.42884,-101.888 0/0:43:43,0:43:1726:0:0:0,-12.9443,-155.556 dDocent_Contig_5303 1 . N G 64.5896 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=68;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:68:-6.45788,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5304 10 . T C 85663.2 . AB=0.780399;ABP=1508.16;AC=9;AF=0.75;AN=12;AO=2647;CIGAR=1X;DP=3205;DPB=3205;DPRA=0;EPP=5750.9;EPPR=1214.69;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999622;PAIREDR=0.998208;PAO=0;PQA=0;PQR=0;PRO=0;QA=105305;QR=19521;RO=558;RPL=0;RPP=5750.9;RPPR=1214.69;RPR=2647;RUN=1;SAF=2647;SAP=5750.9;SAR=0;SRF=558;SRP=1214.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:296:28,268:28:1016:268:10651:-868.786,0,-2.64379 1/1:338:29,309:29:1019:309:12189:-1004.17,-9.73036,0 1/1:259:10,249:10:363:249:9930:-860.048,-44.9532,0 1/1:404:35,369:35:1208:369:14643:-1207.78,-12.6068,0 0/1:942:209,733:209:7304:733:29222:-2343.81,0,-373.782 0/1:966:247,719:247:8611:719:28670:-2286.94,0,-484.141 dDocent_Contig_5305 32 . C G 523.139 . AB=0.192857;ABP=117.726;AC=1;AF=0.0833333;AN=12;AO=27;CIGAR=1X;DP=889;DPB=889;DPRA=0.934579;EPP=61.6401;EPPR=1872.65;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1061;QR=34360;RO=861;RPL=0;RPP=61.6401;RPPR=1872.65;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=861;SRP=1872.65;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:92:92,0:92:3679:0:0:0,-27.6948,-331.13 0/0:43:43,0:43:1701:0:0:0,-12.9443,-153.321 0/0:70:70,0:70:2797:0:0:0,-21.0721,-251.842 0/1:140:112,27:112:4430:27:1061:-53.8367,0,-356.715 0/0:285:285,0:285:11370:0:0:0,-85.7935,-1022.54 0/0:259:259,0:259:10383:0:0:0,-77.9668,-933.79 dDocent_Contig_5306 16 . C T 1212.54 . AB=0.139183;ABP=750.473;AC=1;AF=0.0833333;AN=12;AO=176;CIGAR=1X;DP=3245;DPB=3245;DPRA=1.11643;EPP=385.189;EPPR=6656.4;GTI=0;LEN=1;MEANALT=1.8;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99641;PAO=0;PQA=0;PQR=0;PRO=0;QA=6842;QR=122390;RO=3064;RPL=0;RPP=385.189;RPPR=6656.4;RPR=176;RUN=1;SAF=176;SAP=385.189;SAR=0;SRF=3064;SRP=6656.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:362:360,2:360:14400:2:78:0,-101.569,-1287.48 0/0:493:493,0:493:19642:0:0:0,-148.408,-1766.11 0/0:445:429,14:429:17099:14:541:0,-84.7075,-1488.47 0/0:468:463,5:463:18467:5:193:0,-123.142,-1642.76 0/1:661:567,92:567:22708:92:3572:-122.777,0,-1842.93 0/0:816:752,63:752:30074:63:2458:0,-24.3472,-2482.49 dDocent_Contig_5307 9 . G A 70449.4 . AB=0.475145;ABP=31.615;AC=6;AF=0.5;AN=12;AO=2533;CIGAR=1X;DP=5331;DPB=5331;DPRA=0;EPP=5503.35;EPPR=6072.28;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=96278;QR=106670;RO=2795;RPL=0;RPP=5503.35;RPPR=6072.28;RPR=2533;RUN=1;SAF=2533;SAP=5503.35;SAR=0;SRF=2795;SRP=6072.28;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:729:454,273:454:17339:273:10379:-714.563,0,-1340.45 0/1:867:438,429:438:16709:429:16275:-1203,0,-1242 0/1:568:330,238:330:12667:238:9047:-642.978,0,-968.503 0/1:785:461,324:461:17612:324:12310:-871.107,0,-1347.89 0/1:1180:590,590:590:22478:590:22314:-1651.86,0,-1666.57 0/1:1202:522,679:522:19865:679:25953:-1972.65,0,-1425.16 dDocent_Contig_5308 28 . A C 137.104 . AB=0.26087;ABP=14.4341;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=154;DPB=154;DPRA=1.90625;EPP=26.8965;EPPR=313.531;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.783217;PAO=0;PQA=0;PQR=0;PRO=0;QA=441;QR=5686;RO=143;RPL=0;RPP=26.8965;RPPR=313.531;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=143;SRP=313.531;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:639:0:0:0,-4.81648,-57.8449 0/0:34:33,1:33:1287:1:41:0,-6.14045,-112.004 0/0:30:28,2:28:1119:2:80:0,-1.43932,-93.407 0/0:16:16,0:16:646:0:0:0,-4.81648,-58.4734 0/1:23:17,6:17:670:6:242:-15.2333,0,-53.706 0/0:35:33,2:33:1325:2:78:0,-3.13327,-112.11 dDocent_Contig_5309 89 . C T 3085.99 . AB=0.21816;ABP=588.089;AC=5;AF=0.416667;AN=12;AO=186;CIGAR=1X;DP=977;DPB=977;DPRA=0;EPP=406.904;EPPR=1716.3;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6388;QR=27493;RO=789;RPL=186;RPP=406.904;RPPR=1716.3;RPR=0;RUN=1;SAF=186;SAP=406.904;SAR=0;SRF=789;SRP=1716.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:150:107,42:107:3701:42:1423:-83.2154,0,-288.156 0/1:208:177,31:177:6123:31:1058:-32.9073,0,-488.575 0/1:200:158,42:158:5528:42:1450:-70.5889,0,-437.456 0/1:171:146,25:146:5037:25:867:-26.8695,0,-402.008 0/0:129:127,1:127:4486:1:37:0,-35.0839,-400.334 0/1:119:74,45:74:2618:45:1553:-104.24,0,-200.049 dDocent_Contig_5310 90 . C T 174.657 . AB=0.144068;ABP=132.857;AC=1;AF=0.0833333;AN=12;AO=46;CIGAR=1X;DP=1193;DPB=1193;DPRA=0.78595;EPP=102.898;EPPR=2491.52;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=58.0462;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.949389;PAO=0;PQA=0;PQR=0;PRO=0;QA=1597;QR=40612;RO=1146;RPL=46;RPP=102.898;RPPR=2491.52;RPR=0;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=1146;SRP=2491.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:132:120,12:120:4257:12:421:0,-1.51106,-330.645 0/1:118:101,17:101:3527:17:602:-18.9885,0,-270.458 0/0:309:299,10:299:10573:10:353:0,-60.9092,-919.361 0/0:158:152,6:152:5374:6:214:0,-27.955,-444.216 0/0:234:232,1:232:8208:1:7:0,-69.51,-719.413 0/0:242:242,0:242:8673:0:0:0,-72.8493,-767.497 dDocent_Contig_5311 1 . N G 159.576 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=159;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:38:-3.79727,-0.30103,0 1/1:1:0,1:0:0:1:40:-3.99568,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 dDocent_Contig_5312 19 . G A 1282.13 . AB=0.27;ABP=94.907;AC=2;AF=0.166667;AN=12;AO=77;CIGAR=1X;DP=744;DPB=744;DPRA=1.17568;EPP=170.214;EPPR=1440.53;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3034;QR=26224;RO=662;RPL=0;RPP=170.214;RPPR=1440.53;RPR=77;RUN=1;SAF=77;SAP=170.214;SAR=0;SRF=662;SRP=1440.53;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:119:96,23:96:3793:23:894:-44.9403,0,-305.567 0/0:178:161,12:161:6421:12:466:0,-10.186,-535.352 0/1:81:50,31:50:1992:31:1229:-86.4943,0,-155.088 0/0:144:133,11:133:5288:11:445:0,-2.94204,-435.382 0/0:121:121,0:121:4753:0:0:0,-36.4246,-427.695 0/0:101:101,0:101:3977:0:0:0,-30.404,-357.914 dDocent_Contig_5313 10 . T A 3247.4 . AB=0.250859;ABP=316.792;AC=2;AF=0.166667;AN=12;AO=147;CIGAR=1X;DP=1465;DPB=1465;DPRA=1.114;EPP=322.217;EPPR=2856.33;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997717;PAO=0;PQA=0;PQR=0;PRO=0;QA=5599;QR=45981;RO=1314;RPL=0;RPP=322.217;RPPR=2856.33;RPR=147;RUN=1;SAF=147;SAP=322.217;SAR=0;SRF=1314;SRP=2856.33;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:171:171,0:171:5899:0:0:0,-51.4761,-530.985 0/0:190:189,1:189:6623:1:10:0,-56.1957,-595.114 0/0:278:276,0:276:9710:0:0:0,-83.0843,-873.689 0/0:244:243,0:243:8472:0:0:0,-73.1503,-762.347 0/1:276:186,90:186:6522:90:3423:-225.051,0,-503.937 0/1:306:249,56:249:8755:56:2166:-102.911,0,-695.674 dDocent_Contig_5314 13 . C A 163.927 . AB=0.115789;ABP=246.627;AC=1;AF=0.0833333;AN=12;AO=37;CIGAR=1X;DP=1417;DPB=1417;DPRA=1.49701;EPP=83.3548;EPPR=2997.47;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1409;QR=52632;RO=1379;RPL=0;RPP=83.3548;RPPR=2997.47;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=1379;SRP=2997.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:175:173,2:173:6593:2:78:0,-45.2768,-585.853 0/0:283:278,5:278:10611:5:188:0,-67.9075,-937.313 0/0:327:322,5:322:12256:5:194:0,-80.604,-1084.68 0/1:190:168,22:168:6438:22:831:-17.9156,0,-522.136 0/0:167:167,0:167:6418:0:0:0,-50.272,-577.53 0/0:275:271,3:271:10316:3:118:0,-71.7877,-917.111 dDocent_Contig_5315 16 . C A 3487.91 . AB=0.16129;ABP=1331.32;AC=6;AF=0.5;AN=12;AO=215;CIGAR=1X;DP=1333;DPB=1333;DPRA=0;EPP=469.877;EPPR=2430.72;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999106;PAO=0;PQA=0;PQR=0;PRO=0;QA=8442;QR=44153;RO=1118;RPL=0;RPP=469.877;RPPR=2430.72;RPR=215;RUN=1;SAF=215;SAP=469.877;SAR=0;SRF=1118;SRP=2430.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:184:162,22:162:6440:22:810:-17.8007,0,-523.96 0/1:343:287,56:287:11271:56:2195:-94.4771,0,-910.422 0/1:116:100,16:100:3937:16:633:-22.3832,0,-319.413 0/1:287:225,62:225:8954:62:2467:-135.783,0,-718.94 0/1:156:132,24:132:5241:24:947:-38.564,0,-424.584 0/1:247:212,35:212:8310:35:1390:-51.0049,0,-673.103 dDocent_Contig_5316 98 . N T 262.432 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=267;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:19:-1.89997,-0.30103,0 1/1:2:0,2:0:0:2:54:-5.12867,-0.60206,0 1/1:2:0,2:0:0:2:60:-5.69857,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:99:-9.23712,-0.90309,0 dDocent_Contig_5317 19 . C T 485.474 . AB=0.351852;ABP=13.3047;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=1X;DP=329;DPB=329;DPRA=1.30769;EPP=57.2971;EPPR=663.138;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.28;PAIREDR=0.388158;PAO=0;PQA=0;PQR=0;PRO=0;QA=954;QR=11744;RO=304;RPL=0;RPP=57.2971;RPPR=663.138;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=304;SRP=663.138;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:35,19:35:1364:19:730:-49.7693,0,-106.78 0/0:58:56,2:56:2189:2:70:0,-10.813,-190.568 0/0:43:41,2:41:1593:2:76:0,-5.73003,-136.407 0/0:83:81,2:81:3107:2:78:0,-17.5822,-272.365 0/0:26:26,0:26:984:0:0:0,-7.82678,-88.8576 0/0:65:65,0:65:2507:0:0:0,-19.5669,-225.814 dDocent_Contig_5318 41 . C A 32652.3 . AB=0.367788;ABP=508.295;AC=5;AF=0.416667;AN=12;AO=1235;CIGAR=1X;DP=3977;DPB=3977;DPRA=0;EPP=2684.78;EPPR=5950.67;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=0.99919;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=47910;QR=107699;RO=2739;RPL=0;RPP=2684.78;RPPR=5950.67;RPR=1235;RUN=1;SAF=1235;SAP=2684.78;SAR=0;SRF=2739;SRP=5950.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:440:206,234:206:8024:234:9096:-685.73,0,-589.342 0/1:590:335,254:335:13111:254:9785:-702.423,0,-1001.35 0/1:578:350,227:350:13947:227:8858:-622.984,0,-1080.42 0/1:850:476,373:476:18638:373:14573:-1054.61,0,-1420.03 0/0:649:638,11:638:25034:11:368:0,-161.926,-2217.53 0/1:870:734,136:734:28945:136:5230:-208.703,0,-2340.67 dDocent_Contig_5319 87 . G A 31250.3 . AB=0.296082;ABP=1874.29;AC=6;AF=0.5;AN=12;AO=1534;CIGAR=1X;DP=5181;DPB=5181;DPRA=0;EPP=3334.05;EPPR=7918.03;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999177;PAO=0;PQA=0;PQR=0;PRO=0;QA=52170;QR=124111;RO=3645;RPL=1534;RPP=3334.05;RPPR=7918.03;RPR=0;RUN=1;SAF=1534;SAP=3334.05;SAR=0;SRF=3645;SRP=7918.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:568:373,194:373:12756:194:6587:-421.939,0,-976.95 0/1:865:593,272:593:20190:272:9276:-574.499,0,-1556.41 0/1:698:456,242:456:15477:242:8257:-533.088,0,-1182.66 0/1:846:559,287:559:19009:287:9687:-617.197,0,-1455.88 0/1:1075:830,244:830:28357:244:8334:-426.759,0,-2228.19 0/1:1129:834,295:834:28322:295:10029:-562.77,0,-2208.56 dDocent_Contig_5320 9 . G C 80.4946 . AB=0.105263;ABP=208.729;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=529;DPB=529;DPRA=2.13281;EPP=42.0968;EPPR=1112.63;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=689;QR=19188;RO=511;RPL=0;RPP=42.0968;RPPR=1112.63;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=511;SRP=1112.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:46:46,0:46:1730:0:0:0,-13.8474,-155.959 0/0:70:70,0:70:2628:0:0:0,-21.0721,-236.721 0/0:72:72,0:72:2675:0:0:0,-21.6742,-240.954 0/0:68:68,0:68:2531:0:0:0,-20.47,-227.992 0/0:121:119,2:119:4465:2:78:0,-29.0212,-394.518 0/1:152:136,16:136:5159:16:611:-9.57234,0,-418.571 dDocent_Contig_5328 102 . N C 896.14 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=28;CIGAR=1X;DP=28;DPB=28;DPRA=0;EPP=63.8115;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=969;QR=0;RO=0;RPL=28;RPP=63.8115;RPPR=0;RPR=0;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:8:0,8:0:0:8:278:-25.358,-2.40824,0 1/1:9:0,9:0:0:9:308:-28.0523,-2.70927,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:8:0,8:0:0:8:278:-25.358,-2.40824,0 ./.:.:.:.:.:.:.:. dDocent_Contig_5331 7 . A C 11548.6 . AB=0.213752;ABP=1907.53;AC=4;AF=0.333333;AN=12;AO=587;CIGAR=2X;DP=4680;DPB=4680;DPRA=0;EPP=1277.66;EPPR=8864.79;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.996593;PAIREDR=0.99755;PAO=0;PQA=0;PQR=0;PRO=0;QA=22407;QR=155535;RO=4081;RPL=0;RPP=1277.66;RPPR=8864.79;RPR=587;RUN=1;SAF=587;SAP=1277.66;SAR=0;SRF=4081;SRP=8864.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:496:401,95:401:15274:95:3646:-178.95,0,-1224.67 0|1:871:647,220:647:24603:220:8392:-493.863,0,-1951.73 0|1:458:369,89:369:14052:89:3399:-168.179,0,-1126.22 0|1:851:680,168:680:25973:168:6408:-321.088,0,-2080.55 0|0:1055:1039,13:1039:39611:13:485:0,-272.915,-3518.64 0|0:949:945,2:945:36022:2:77:0,-278.009,-3232.68 dDocent_Contig_5332 31 . C T 3367.75 . AB=0.311715;ABP=150.198;AC=6;AF=0.5;AN=12;AO=149;CIGAR=1X;DP=478;DPB=478;DPRA=0;EPP=326.56;EPPR=715.253;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.845638;PAIREDR=0.887195;PAO=0;PQA=0;PQR=0;PRO=0;QA=5446;QR=13017;RO=328;RPL=0;RPP=326.56;RPPR=715.253;RPR=149;RUN=1;SAF=149;SAP=326.56;SAR=0;SRF=328;SRP=715.253;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:66:41,25:41:1620:25:924:-63.6094,0,-126.167 0/1:117:91,26:91:3627:26:954:-50.9477,0,-291.234 0/1:67:45,22:45:1800:22:822:-54.132,0,-142.046 0/1:90:60,29:60:2390:29:1040:-66.6981,0,-188.059 0/1:86:51,35:51:2005:35:1285:-90.0457,0,-154.743 0/1:52:40,12:40:1575:12:421:-22.5635,0,-126.328 dDocent_Contig_5333 39 . G A 5004.19 . AB=0.468421;ABP=6.30179;AC=5;AF=0.416667;AN=12;AO=178;CIGAR=1X;DP=430;DPB=430;DPRA=1.52;EPP=389.532;EPPR=550.221;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6919;QR=9859;RO=252;RPL=0;RPP=389.532;RPPR=550.221;RPR=178;RUN=1;SAF=178;SAP=389.532;SAR=0;SRF=252;SRP=550.221;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:39:10,29:10:384:29:1120:-89.3488,0,-23.1715 0/1:129:78,51:78:3070:51:2001:-141.47,0,-237.578 0/1:72:21,51:21:820:51:1964:-155.293,0,-52.4408 0/1:75:42,33:42:1614:33:1288:-93.6179,0,-122.919 0/0:50:50,0:50:1974:0:0:0,-15.0515,-177.866 0/1:65:51,14:51:1997:14:546:-29.9113,0,-160.357 dDocent_Contig_5334 55 . T G 191.537 . AB=0.296296;ABP=12.7417;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=254;DPB=254;DPRA=0.594714;EPP=20.3821;EPPR=537.193;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.375;PAIREDR=0.865854;PAO=0;PQA=0;PQR=0;PRO=0;QA=316;QR=9714;RO=246;RPL=8;RPP=20.3821;RPPR=537.193;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=246;SRP=537.193;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:40,0:40:1600:0:0:0,-12.0412,-144.237 0/0:60:60,0:60:2332:0:0:0,-18.0618,-210.049 0/0:54:54,0:54:2118:0:0:0,-16.2556,-190.799 0/0:43:43,0:43:1701:0:0:0,-12.9443,-153.313 0/1:27:19,8:19:767:8:316:-20.6765,0,-61.2212 0/0:30:30,0:30:1196:0:0:0,-9.0309,-107.916 dDocent_Contig_5335 77 . G C 17287.3 . AB=0.315603;ABP=669.298;AC=4;AF=0.333333;AN=12;AO=814;CIGAR=1X;DP=3567;DPB=3567;DPRA=0;EPP=1770.59;EPPR=5976.73;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997543;PAIREDR=0.999636;PAO=0;PQA=0;PQR=0;PRO=0;QA=30525;QR=101654;RO=2751;RPL=814;RPP=1770.59;RPPR=5976.73;RPR=0;RUN=1;SAF=814;SAP=1770.59;SAR=0;SRF=2751;SRP=5976.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:536:504,32:504:18208:32:1139:0,-58.5406,-1535.39 0/0:775:705,70:705:25464:70:2547:0,-3.82757,-2061.41 0/1:390:310,80:310:11795:80:2897:-143.544,0,-943.677 0/1:689:540,148:540:20448:148:5499:-287.467,0,-1631.75 0/1:522:296,225:296:10676:225:8540:-611.174,0,-803.479 0/1:655:396,259:396:15063:259:9903:-693.769,0,-1157.81 dDocent_Contig_5336 19 . T G 34628.2 . AB=0.768382;ABP=513.53;AC=8;AF=0.666667;AN=12;AO=1066;CIGAR=1X;DP=1286;DPB=1286;DPRA=0;EPP=2317.8;EPPR=478.563;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.994371;PAIREDR=0.995434;PAO=0;PQA=0;PQR=0;PRO=0;QA=42558;QR=8735;RO=219;RPL=0;RPP=2317.8;RPPR=478.563;RPR=1066;RUN=1;SAF=1066;SAP=2317.8;SAR=0;SRF=219;SRP=478.563;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:180:28,152:28:1112:152:6006:-486.145,0,-46.1825 1/1:194:16,178:16:639:178:7100:-580.812,-0.554445,0 1/1:276:15,261:15:603:261:10491:-888.855,-28.4753,0 0/1:206:37,169:37:1470:169:6784:-548.231,0,-70.5319 0/1:243:56,186:56:2227:186:7399:-592.366,0,-127.433 0/1:187:67,120:67:2684:120:4778:-373.634,0,-185.388 dDocent_Contig_5337 96 . T G 33.7965 . AB=0.120879;ABP=116.619;AC=3;AF=0.25;AN=12;AO=18;CIGAR=1X;DP=235;DPB=235;DPRA=0.821739;EPP=42.0968;EPPR=472.048;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.953704;PAO=0;PQA=0;PQR=0;PRO=0;QA=620;QR=7403;RO=216;RPL=18;RPP=42.0968;RPPR=472.048;RPR=0;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=216;SRP=472.048;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:31,4:31:1068:4:132:-1.67035,0,-85.8918 0/0:46:45,0:45:1543:0:0:0,-13.5463,-138.813 0/1:19:17,2:17:587:2:70:-0.927826,0,-47.4361 0/1:37:32,5:32:1099:5:174:-4.86384,0,-88.0796 0/0:43:41,2:41:1394:2:69:0,-6.39163,-119.203 0/0:55:50,5:50:1712:5:175:0,-0.462955,-138.273 dDocent_Contig_5338 43 . C T 148.568 . AB=0.125;ABP=130.041;AC=1;AF=0.0833333;AN=12;AO=33;CIGAR=1X;DP=811;DPB=811;DPRA=1.47216;EPP=74.6689;EPPR=1640.7;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.575758;PAIREDR=0.508997;PAO=0;PQA=0;PQR=0;PRO=0;QA=1331;QR=31234;RO=778;RPL=0;RPP=74.6689;RPPR=1666.46;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=775;SRP=1666.46;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:141:137,4:137:5507:4:164:0,-27.2953,-480.284 0/0:149:142,7:142:5686:7:282:0,-19.1009,-485.78 0/0:97:97,0:97:3903:0:0:0,-29.1999,-351.25 0/0:185:178,7:178:7154:7:277:0,-30.3922,-618.2 0/1:104:91,13:91:3675:13:526:-16.3797,0,-299.45 0/0:135:133,2:133:5309:2:82:0,-32.8594,-469.871 dDocent_Contig_5339 90 . G A 1388.54 . AB=0.385093;ABP=21.4746;AC=4;AF=0.333333;AN=12;AO=64;CIGAR=1X;DP=222;DPB=222;DPRA=0.968421;EPP=141.985;EPPR=343.931;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.88535;PAO=0;PQA=0;PQR=0;PRO=0;QA=2215;QR=5395;RO=157;RPL=64;RPP=141.985;RPPR=343.931;RPR=0;RUN=1;SAF=64;SAP=141.985;SAR=0;SRF=157;SRP=343.931;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:39:24,15:24:830:15:522:-35.5698,0,-63.2778 0/0:38:38,0:38:1315:0:0:0,-11.4391,-118.652 0/0:23:21,2:21:731:2:70:0,-0.276294,-59.4656 0/1:41:30,10:30:1034:10:349:-19.583,0,-81.2221 0/1:36:17,19:17:563:19:648:-47.803,0,-40.1479 0/1:45:27,18:27:922:18:626:-43.1201,0,-69.7466 dDocent_Contig_5340 30 . C T 1487.61 . AB=0.306604;ABP=71.8828;AC=6;AF=0.5;AN=12;AO=65;CIGAR=1X2M1X;DP=212;DPB=212;DPRA=0;EPP=15.0703;EPPR=320.045;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2462;QR=5787;RO=146;RPL=0;RPP=144.156;RPPR=320.045;RPR=65;RUN=1;SAF=42;SAP=15.0703;SAR=23;SRF=146;SRP=320.045;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:13:10,3:10:390:3:114:-6.71896,0,-31.5387 0|1:32:13,19:13:503:19:713:-54.8634,0,-35.9807 0|1:57:48,8:48:1915:8:311:-11.3106,0,-155.534 0|1:51:34,17:34:1353:17:643:-42.8497,0,-106.681 0|1:32:23,9:23:909:9:333:-20.6876,0,-72.4885 0|1:27:18,9:18:717:9:348:-23.552,0,-56.7303 dDocent_Contig_5341 52 . T C 12526.8 . AB=0.681135;ABP=173.716;AC=6;AF=0.5;AN=12;AO=408;CIGAR=1X;DP=599;DPB=599;DPRA=0;EPP=888.971;EPPR=417.762;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=16038;QR=7464;RO=191;RPL=408;RPP=888.971;RPPR=417.762;RPR=0;RUN=1;SAF=408;SAP=888.971;SAR=0;SRF=191;SRP=417.762;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:72:32,40:32:1235:40:1548:-117.887,0,-89.7546 0/1:89:29,60:29:1131:60:2375:-187.115,0,-75.2801 0/1:163:44,119:44:1747:119:4674:-371.539,0,-108.381 0/1:79:9,70:9:327:70:2758:-224.562,0,-5.97855 0/1:98:57,41:57:2209:41:1584:-113.304,0,-169.499 0/1:98:20,78:20:815:78:3099:-249.495,0,-44.1633 dDocent_Contig_5342 56 . T G 172.151 . AB=0.304348;ABP=10.6577;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=170;DPB=170;DPRA=0.782313;EPP=18.2106;EPPR=356.96;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=281;QR=6382;RO=163;RPL=7;RPP=18.2106;RPPR=356.96;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=163;SRP=356.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:668:0:0:0,-5.11751,-60.4484 0/0:45:45,0:45:1730:0:0:0,-13.5463,-155.927 0/0:20:20,0:20:800:0:0:0,-6.0206,-72.3162 0/0:16:16,0:16:631:0:0:0,-4.81648,-57.1257 0/0:49:49,0:49:1927:0:0:0,-14.7505,-173.638 0/1:23:16,7:16:626:7:281:-18.738,0,-49.7501 dDocent_Contig_5343 13 . C A 159924 . AB=0.825594;ABP=4305.92;AC=8;AF=0.666666;AN=12;AO=4916;CIGAR=1X2M;DP=5811;DPB=5811;DPRA=0;EPP=10678;EPPR=1351.49;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.99939;PAIREDR=0.99839;PAO=0;PQA=0;PQR=0;PRO=0;QA=194111;QR=24377;RO=621;RPL=0;RPP=10678;RPPR=1351.49;RPR=4916;RUN=1;SAF=4916;SAP=10678;SAR=0;SRF=621;SRP=1351.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:774:108,0,665:108:4276:0,665:0,26241:-2126.77,-2159.28,-2511.2,0,-352.236,-152.051 0|1:964:115,0,848:115:4541:0,848:0,33502:-2721.99,-2756.61,-3130.25,0,-373.641,-118.367 0|1:600:88,0,512:88:3436:0,512:0,20213:-1636.99,-1663.48,-1945.92,0,-282.83,-128.703 1|1:1138:80,0,1058:80:3119:0,1058:0,41813:-3478.69,-3502.78,-3759.12,-61.7581,-318.49,0 0|1:1154:109,103,942:109:4268:103,942:4086,37166:-3024.92,-2721.39,-3041.31,0,-14.571,-67.3487 1|1:1181:121,168,891:121:4737:168,891:6613,35176:-3012.31,-2504.76,-2843.66,-154.506,0,-275.76 dDocent_Contig_5344 26 . G A 171.749 . AB=0.135417;ABP=113.846;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1X;DP=473;DPB=473;DPRA=0.884462;EPP=44.2683;EPPR=986.687;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.736842;PAIREDR=0.96468;PAO=0;PQA=0;PQR=0;PRO=0;QA=768;QR=17939;RO=453;RPL=0;RPP=44.2683;RPPR=986.687;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=453;SRP=986.687;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:61:61,0:61:2395:0:0:0,-18.3628,-215.722 0/1:96:83,13:83:3299:13:525:-18.6978,0,-268.076 0/0:49:48,1:48:1887:1:41:0,-10.6559,-165.937 0/0:77:71,5:71:2813:5:202:0,-4.71664,-234.725 0/0:59:59,0:59:2354:0:0:0,-17.7608,-212.013 0/0:131:131,0:131:5191:0:0:0,-39.4349,-467.063 dDocent_Contig_5345 57 . C A 2291.84 . AB=0.335689;ABP=69.3745;AC=4;AF=0.333333;AN=12;AO=99;CIGAR=1X;DP=435;DPB=435;DPRA=0;EPP=217.986;EPPR=730.454;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.8788;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.868687;PAIREDR=0.871642;PAO=0;PQA=0;PQR=0;PRO=0;QA=3715;QR=12573;RO=335;RPL=99;RPP=217.986;RPPR=730.454;RPR=0;RUN=1;SAF=99;SAP=217.986;SAR=0;SRF=335;SRP=730.454;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:62:39,22:39:1469:22:845:-57.6371,0,-113.75 0/1:101:54,47:54:1913:47:1716:-124.287,0,-142.029 0/1:47:41,6:41:1541:6:231:-7.00926,0,-124.804 0/1:73:53,20:53:2036:20:768:-47.472,0,-161.5 0/0:71:70,1:70:2665:1:39:0,-17.4766,-236.143 0/0:81:78,3:78:2949:3:116:0,-13.5657,-254.764 dDocent_Contig_5346 36 . T C 302.417 . AB=0.102459;ABP=672.892;AC=1;AF=0.0833333;AN=12;AO=74;CIGAR=1X;DP=2644;DPB=2644;DPRA=1.31519;EPP=163.699;EPPR=5583.69;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2956;QR=101682;RO=2570;RPL=0;RPP=163.699;RPPR=5583.69;RPR=74;RUN=1;SAF=74;SAP=163.699;SAR=0;SRF=2570;SRP=5583.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:349:349,0:349:13814:0:0:0,-105.059,-1242.25 0/0:456:438,18:438:17382:18:733:0,-70.9765,-1496.7 0/0:258:254,4:254:10101:4:159:0,-62.9738,-893.749 0/1:488:438,50:438:17209:50:1983:-31.7646,0,-1400.54 0/0:534:533,1:533:21128:1:41:0,-156.655,-1895.68 0/0:559:558,1:558:22048:1:40:0,-164.28,-1978.47 dDocent_Contig_5347 8 . G T 55.9848 . AB=0.127273;ABP=69.3784;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=226;DPB=226;DPRA=2.45882;EPP=35.5824;EPPR=461.191;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.900474;PAO=0;PQA=0;PQR=0;PRO=0;QA=585;QR=8101;RO=211;RPL=0;RPP=35.5824;RPPR=461.191;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=211;SRP=461.191;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:17,2:17:652:2:78:-1.6839,0,-53.2971 0/0:48:44,4:44:1691:4:156:0,-0.0321512,-138.032 0/0:46:43,3:43:1652:3:117:0,-2.937,-138.033 0/1:36:31,5:31:1197:5:195:-7.08712,0,-97.1897 0/0:17:17,0:17:642:0:0:0,-5.11751,-58.1107 0/0:60:59,1:59:2267:1:39:0,-14.1652,-200.352 dDocent_Contig_5348 18 . C A 50.5131 . AB=0.114754;ABP=81.6461;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=307;DPB=307;DPRA=1.23984;EPP=18.2106;EPPR=643.624;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.431438;PAO=0;PQA=0;PQR=0;PRO=0;QA=273;QR=11771;RO=299;RPL=0;RPP=18.2106;RPPR=652.281;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=298;SRP=643.624;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:27,0:27:1038:0:0:0,-8.12781,-93.3546 0/0:44:44,0:44:1741:0:0:0,-13.2453,-156.917 0/0:56:56,0:56:2194:0:0:0,-16.8577,-197.632 0/0:44:44,0:44:1702:0:0:0,-13.2453,-153.403 0/1:61:54,7:54:2170:7:273:-6.57418,0,-177.106 0/0:74:74,0:74:2926:0:0:0,-22.2762,-263.445 dDocent_Contig_5349 22 . G T 2891.26 . AB=0.372611;ABP=47.2696;AC=6;AF=0.5;AN=12;AO=117;CIGAR=1X;DP=314;DPB=314;DPRA=0;EPP=7.18621;EPPR=426.447;GTI=0;LEN=1;MEANALT=1.16667;MQM=57.0256;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4366;QR=7676;RO=195;RPL=0;RPP=257.073;RPPR=426.447;RPR=117;RUN=1;SAF=51;SAP=7.18621;SAR=66;SRF=195;SRP=426.447;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:23,18:23:909:18:667:-47.9839,0,-69.7758 0/1:63:35,26:35:1388:26:987:-70.3926,0,-106.484 0/1:77:62,15:62:2471:15:552:-26.7995,0,-199.362 0/1:50:22,28:22:805:28:1047:-79.3935,0,-57.6916 0/1:58:39,19:39:1554:19:693:-45.1925,0,-122.643 0/1:25:14,11:14:549:11:420:-30.5854,0,-42.2251 dDocent_Contig_5350 26 . G A 172.388 . AB=0.15493;ABP=76.4428;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=386;DPB=386;DPRA=0.969388;EPP=35.5824;EPPR=808.627;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.6;PAIREDR=0.603774;PAO=0;PQA=0;PQR=0;PRO=0;QA=604;QR=14679;RO=371;RPL=0;RPP=35.5824;RPPR=808.627;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=371;SRP=808.627;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:47,1:47:1837:1:40:0,-10.4538,-161.543 0/0:83:83,0:83:3274:0:0:0,-24.9855,-294.741 0/1:71:60,11:60:2402:11:442:-18.7617,0,-194.957 0/0:71:68,3:68:2675:3:122:0,-10.0006,-229.511 0/0:61:61,0:61:2413:0:0:0,-18.3628,-217.322 0/0:52:52,0:52:2078:0:0:0,-15.6536,-187.207 dDocent_Contig_5351 24 . T A 1288.13 . AB=0.20598;ABP=229.024;AC=3;AF=0.25;AN=12;AO=67;CIGAR=5M1X;DP=473;DPB=464.5;DPRA=1.98947;EPP=148.499;EPPR=843.37;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.992248;PAO=0;PQA=0;PQR=0;PRO=0;QA=2631;QR=14702;RO=387;RPL=0;RPP=148.499;RPPR=843.37;RPR=67;RUN=1;SAF=67;SAP=148.499;SAR=0;SRF=387;SRP=843.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:95:81,0,13:81:3034:0,13:0,512:-17.7185,-42.1019,-290.533,0,-248.414,-244.5 0|1:119:76,17,26:76:2841:17,26:611,1026:-61.5583,-34.6067,-262.077,0,-182.774,-224.788 0|0:30:30,0,0:30:1146:0,0:0,0:0,-9.0309,-103.434,-9.0309,-103.434,-103.434 0|1:87:64,0,23:64:2449:0,23:0,896:-54.7582,-74.0242,-274.967,0,-201.331,-194.407 0|0:65:64,0,0:64:2466:0,0:0,0:0,-19.2659,-221.762,-19.2659,-221.762,-221.762 0|0:77:72,0,5:72:2766:0,5:0,197:0,-21.6742,-248.705,-5.07379,-232.498,-230.993 dDocent_Contig_5352 32 . T C 47289.2 . AB=0.309596;ABP=1860.25;AC=6;AF=0.5;AN=12;AO=1826;CIGAR=1X;DP=5898;DPB=5898;DPRA=0;EPP=3968.12;EPPR=8838.73;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999452;PAIREDR=0.999263;PAO=0;PQA=0;PQR=0;PRO=0;QA=72445;QR=161056;RO=4069;RPL=0;RPP=3968.12;RPPR=8838.73;RPR=1826;RUN=1;SAF=1826;SAP=3968.12;SAR=0;SRF=4069;SRP=8838.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:747:487,260:487:19285:260:10263:-698.168,0,-1509.26 0/1:970:610,359:610:24106:359:14238:-988.366,0,-1875.56 0/1:847:575,272:575:22866:272:10810:-717.218,0,-1801.05 0/1:1091:719,370:719:28522:370:14704:-994.357,0,-2236.62 0/1:1072:831,241:831:32791:241:9568:-537.858,0,-2625.64 0/1:1171:847,324:847:33486:324:12862:-804.173,0,-2658.31 dDocent_Contig_5353 34 . A G 248.536 . AB=0.13253;ABP=197.71;AC=1;AF=0.0833333;AN=12;AO=35;CIGAR=1X;DP=876;DPB=876;DPRA=1.49701;EPP=79.0118;EPPR=1827.05;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995238;PAO=0;PQA=0;PQR=0;PRO=0;QA=1365;QR=33166;RO=840;RPL=0;RPP=79.0118;RPPR=1827.05;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=840;SRP=1827.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:209:196,13:196:7778:13:519:0,-15.859,-652.581 0/0:180:180,0:180:7146:0:0:0,-54.1854,-642.816 0/1:166:143,22:143:5536:22:846:-26.3765,0,-448.023 0/0:158:158,0:158:6265:0:0:0,-47.5627,-563.606 0/0:95:95,0:95:3782:0:0:0,-28.5978,-340.389 0/0:68:68,0:68:2659:0:0:0,-20.47,-239.447 dDocent_Contig_5354 32 . T G 1159.5 . AB=0.352;ABP=26.7923;AC=4;AF=0.333333;AN=12;AO=44;CIGAR=1X;DP=181;DPB=181;DPRA=1.11607;EPP=98.5551;EPPR=300.502;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.886364;PAIREDR=0.890511;PAO=0;PQA=0;PQR=0;PRO=0;QA=1771;QR=5079;RO=137;RPL=0;RPP=98.5551;RPPR=300.502;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=137;SRP=300.502;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:26,16:26:959:16:649:-46.1001,0,-73.9821 0/1:34:25,9:25:932:9:350:-21.6172,0,-73.9588 0/1:21:14,7:14:528:7:284:-19.6122,0,-41.5402 0/1:28:16,12:16:608:12:488:-35.8421,0,-46.6286 0/0:26:26,0:26:953:0:0:0,-7.82678,-86.0817 0/0:30:30,0:30:1099:0:0:0,-9.0309,-99.2083 dDocent_Contig_5355 11 . C T 99.533 . AB=0.129412;ABP=104.405;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1X;DP=473;DPB=473;DPRA=1.10222;EPP=44.2683;EPPR=988.859;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.947368;PAIREDR=0.898678;PAO=0;PQA=0;PQR=0;PRO=0;QA=699;QR=18106;RO=454;RPL=0;RPP=44.2683;RPPR=988.859;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=454;SRP=988.859;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:66:64,2:64:2562:2:68:0,-13.4103,-224.252 0/1:85:74,11:74:2933:11:408:-11.4762,0,-238.488 0/0:64:64,0:64:2544:0:0:0,-19.2659,-229.096 0/0:97:91,6:91:3614:6:223:0,-8.77104,-304.857 0/0:56:56,0:56:2238:0:0:0,-16.8577,-201.585 0/0:105:105,0:105:4215:0:0:0,-31.6081,-379.302 dDocent_Contig_5356 106 . A G 499.866 . AB=0.125;ABP=51.8684;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1M1X6M1X12M;DP=131;DPB=130.571;DPRA=0.689655;EPP=13.8677;EPPR=200.614;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.8;PAIREDR=0.879121;PAO=0;PQA=0;PQR=0;PRO=0;QA=196;QR=3576;RO=91;RPL=5;RPP=13.8677;RPPR=200.614;RPR=0;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=200.614;SRR=91;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:19:12,0,0,5:12:466:0,0,5:0,0,198:-12.6876,-16.3,-54.5857,-16.3,-54.5857,-54.5857,0,-38.288,-38.288,-36.7829 0|0:13:9,1,0,3:9:352:1,0,3:41,0,120:-7.16835,-6.49106,-35.123,-9.87762,-35.4241,-38.8094,0,-25.5368,-28.9228,-28.0197 0|0:15:9,0,0,6:9:354:0,0,6:0,0,242:-17.6421,-20.3513,-49.4654,-20.3513,-49.4654,-49.4654,0,-29.513,-29.513,-27.7068 0|1:27:15,4,3,4:15:589:4,3,4:155,121,152:-8.21806,0,-47.2416,-2.75375,-38.4696,-50.2994,-0.273266,-35.9844,-38.7406,-47.5125 0|0:29:28,0,1,0:28:1096:0,1,0:0,38,0:0,-8.42884,-98.556,-4.9326,-95.4399,-95.1388,-8.42884,-98.556,-95.4399,-98.556 0|0:28:18,0,4,6:18:719:0,4,6:0,154,230:-13.4553,-18.8738,-78.106,-6.22852,-65.4628,-64.2587,0,-59.234,-46.592,-57.4278 dDocent_Contig_5357 26 . C A 64.9262 . AB=0.102804;ABP=149.635;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=416;DPB=416;DPRA=1.55556;EPP=31.2394;EPPR=878.114;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995037;PAO=0;PQA=0;PQR=0;PRO=0;QA=508;QR=16164;RO=403;RPL=0;RPP=31.2394;RPPR=878.114;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=403;SRP=878.114;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:42:42,0:42:1684:0:0:0,-12.6433,-151.784 0/0:86:86,0:86:3468:0:0:0,-25.8886,-312.146 0/0:39:39,0:39:1566:0:0:0,-11.7402,-141.177 0/0:67:67,0:67:2695:0:0:0,-20.169,-242.653 0/0:75:73,2:73:2930:2:65:0,-16.4075,-257.62 0/1:107:96,11:96:3821:11:443:-8.01549,0,-311.684 dDocent_Contig_5358 40 . C T 2153.34 . AB=0.163085;ABP=782.898;AC=3;AF=0.25;AN=12;AO=157;CIGAR=1X;DP=1834;DPB=1834;DPRA=1.11942;EPP=343.931;EPPR=3644.57;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.997018;PAO=0;PQA=0;PQR=0;PRO=0;QA=6177;QR=66742;RO=1677;RPL=0;RPP=343.931;RPPR=3644.57;RPR=157;RUN=1;SAF=157;SAP=343.931;SAR=0;SRF=1677;SRP=3644.57;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:219:157,62:157:6226:62:2422:-152.201,0,-494.181 0/0:542:517,25:517:20681:25:974:0,-75.2067,-1771.54 0/1:250:225,25:225:8881:25:1011:-16.0248,0,-723.53 0/1:322:280,42:280:11160:42:1656:-52.3306,0,-906.723 0/0:278:278,0:278:11039:0:0:0,-83.6863,-992.769 0/0:223:220,3:220:8755:3:114:0,-56.4988,-776.813 dDocent_Contig_5359 29 . A G 7122.1 . AB=0.244882;ABP=720.971;AC=4;AF=0.333333;AN=12;AO=329;CIGAR=1X;DP=1988;DPB=1988;DPRA=0.907521;EPP=717.425;EPPR=3605.48;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998192;PAO=0;PQA=0;PQR=0;PRO=0;QA=12959;QR=65550;RO=1659;RPL=0;RPP=717.425;RPPR=3605.48;RPR=329;RUN=1;SAF=329;SAP=717.425;SAR=0;SRF=1659;SRP=3605.48;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:292:224,68:224:8911:68:2694:-154.673,0,-713.592 0/1:370:284,86:284:11268:86:3404:-195.031,0,-901.991 0/1:189:152,37:152:6024:37:1461:-74.847,0,-485.049 0/1:419:299,120:299:11801:120:4679:-294.882,0,-935.188 0/0:359:359,0:359:14150:0:0:0,-108.07,-1272.5 0/0:359:341,18:341:13396:18:721:0,-42.8556,-1139.48 dDocent_Contig_5360 70 . T C 281.107 . AB=0.230769;ABP=43.9342;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=347;DPB=347;DPRA=1.15248;EPP=35.5824;EPPR=710.937;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.133333;PAIREDR=0.760606;PAO=0;PQA=0;PQR=0;PRO=0;QA=543;QR=11917;RO=330;RPL=14;RPP=27.4756;RPPR=6.80051;RPR=1;RUN=1;SAF=14;SAP=27.4756;SAR=1;SRF=178;SRP=7.45853;SRR=152;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:65:63,0:63:2232:0:0:0,-18.9649,-200.774 0/0:72:72,0:72:2552:0:0:0,-21.6742,-229.922 0/0:53:53,0:53:1932:0:0:0,-15.9546,-174.143 0/0:49:49,0:49:1787:0:0:0,-14.7505,-161.092 0/0:43:43,0:43:1595:0:0:0,-12.9443,-143.828 0/1:65:50,15:50:1819:15:543:-29.6336,0,-144.405 dDocent_Contig_5361 23 . A C 1113.06 . AB=0.200717;ABP=220.072;AC=4;AF=0.333333;AN=12;AO=57;CIGAR=1X;DP=388;DPB=388;DPRA=1.23704;EPP=126.784;EPPR=721.768;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990937;PAO=0;PQA=0;PQR=0;PRO=0;QA=2276;QR=13203;RO=331;RPL=0;RPP=126.784;RPPR=721.768;RPR=57;RUN=1;SAF=57;SAP=126.784;SAR=0;SRF=331;SRP=721.768;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:38,16:38:1524:16:625:-40.3241,0,-121.145 0/1:80:67,13:67:2691:13:519:-22.9739,0,-218.222 0/1:97:80,17:80:3193:17:687:-32.9589,0,-258.234 0/1:48:38,10:38:1520:10:404:-22.271,0,-122.593 0/0:54:54,0:54:2134:0:0:0,-16.2556,-192.237 0/0:55:54,1:54:2141:1:41:0,-12.4621,-188.777 dDocent_Contig_5362 98 . N A 322.253 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=12;CIGAR=1X;DP=14;DPB=14;DPRA=0;EPP=29.068;EPPR=0;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=335;QR=0;RO=0;RPL=12;RPP=29.068;RPPR=0;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,1:0:0:1:16:-1.43499,-0.30103,0 1/1:3:0,2:0:0:2:60:-5.48586,-0.60206,0 1/1:2:0,2:0:0:2:54:-5.1294,-0.60206,0 1/1:3:0,3:0:0:3:87:-8.11864,-0.90309,0 1/1:2:0,2:0:0:2:53:-5.03451,-0.60206,0 1/1:2:0,2:0:0:2:65:-6.17353,-0.60206,0 dDocent_Contig_5363 10 . C T 396.899 . AB=0.23;ABP=66.3304;AC=3;AF=0.25;AN=12;AO=24;CIGAR=1X;DP=189;DPB=189;DPRA=1;EPP=55.1256;EPPR=361.303;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8788;NS=6;NUMALT=1;ODDS=0;PAIRED=0.708333;PAIREDR=0.666667;PAO=0;PQA=0;PQR=0;PRO=0;QA=856;QR=6427;RO=165;RPL=0;RPP=55.1256;RPPR=361.303;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=165;SRP=361.303;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:18,6:18:724:6:219:-12.8386,0,-58.2615 0/1:34:23,11:23:889:11:389:-25.1089,0,-70.0814 0/0:26:25,1:25:998:1:34:0,-4.42787,-86.3968 0/1:42:36,6:36:1361:6:214:-6.96427,0,-110.103 0/0:24:24,0:24:937:0:0:0,-7.22472,-84.6312 0/0:39:39,0:39:1518:0:0:0,-11.7402,-136.869 dDocent_Contig_5367 12 . T A 172.265 . AB=0;ABP=0;AC=4;AF=0.5;AN=8;AO=5;CIGAR=1X1M2D3M;DP=8;DPB=6.57143;DPRA=5;EPP=13.8677;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=183;QR=69;RO=2;RPL=0;RPP=13.8677;RPPR=7.35324;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=1;SRP=3.0103;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:1:0,0:0:0:0:0:0,0,0 1|1:5:0,5:0:0:5:183:-16.8268,-1.50515,0 0|0:1:1,0:1:37:0:0:0,-0.30103,-3.69783 .:.:.:.:.:.:.:. 0|0:1:1,0:1:32:0:0:0,-0.30103,-3.19931 dDocent_Contig_5370 107 . N A 57.951 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=61;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:61:-5.79402,-0.60206,0 dDocent_Contig_5372 36 . A C 29695.6 . AB=0.0241405;ABP=2691.7;AC=0;AF=0;AN=12;AO=33;CIGAR=6M1X1M1X6M;DP=1548;DPB=1543.07;DPRA=0;EPP=74.6689;EPPR=589.308;GTI=0;LEN=1;MEANALT=7.6;MQM=29.6061;MQMR=53.8704;NS=6;NUMALT=3;ODDS=0;PAIRED=0.969697;PAIREDR=0.266667;PAO=0;PQA=0;PQR=0;PRO=0;QA=825;QR=10557;RO=270;RPL=0;RPP=74.6689;RPPR=589.308;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=270;SRP=589.308;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:244:46,1,6,171:46:1802:1,6,171:41,126,5954:-455.065,-465.528,-608.83,-460.999,-601.218,-602.796,0,-140.268,-135.75,-92.1768 0|0:334:68,10,2,243:68:2653:10,2,243:385,42,8417:-642.017,-630.889,-840.778,-659.849,-841.15,-872.144,0,-181.327,-210.289,-139.774 0|0:350:45,13,22,253:45:1773:13,22,253:491,598,8955:-696.229,-669.553,-804.375,-666.407,-764.919,-798.519,0,-98.5501,-95.4244,-62.6192 0|0:247:61,11,2,162:61:2375:11,2,162:426,42,5613:-424.284,-407.664,-595.026,-440.009,-595.7,-630.079,0,-155.714,-188.062,-141.93 0|0:192:31,16,1,136:31:1204:16,1,136:617,17,4850:-377.926,-336.624,-425.695,-386.297,-429.55,-479.882,0,-43.2579,-92.9409,-52.9588 0|0:181:19,17,0,135:19:750:17,0,135:662,0,4914:-385.26,-336.606,-387.13,-390.979,-392.248,-446.621,0,-1.25525,-55.6484,-15.0093 dDocent_Contig_5374 38 . T A 606.324 . AB=0.133676;ABP=456.424;AC=2;AF=0.166667;AN=12;AO=52;CIGAR=1X;DP=1154;DPB=1154;DPRA=1.01699;EPP=115.927;EPPR=2395.97;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2004;QR=43968;RO=1102;RPL=0;RPP=115.927;RPPR=2395.97;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=1102;SRP=2395.97;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:151:136,15:136:5435:15:582:-7.26143,0,-443.53 0/0:241:241,0:241:9690:0:0:0,-72.5482,-871.459 0/0:73:73,0:73:2925:0:0:0,-21.9752,-263.339 0/1:238:201,37:201:8003:37:1422:-56.5929,0,-648.193 0/0:151:151,0:151:5981:0:0:0,-45.4555,-538.088 0/0:300:300,0:300:11934:0:0:0,-90.309,-1073.21 dDocent_Contig_5375 204 . T A 1592.45 . AB=0.162275;ABP=717.304;AC=2;AF=0.166667;AN=12;AO=120;CIGAR=1X;DP=1852;DPB=1852;DPRA=1.50868;EPP=263.587;EPPR=3764;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999423;PAO=0;PQA=0;PQR=0;PRO=0;QA=4320;QR=62674;RO=1732;RPL=120;RPP=263.587;RPPR=3764;RPR=0;RUN=1;SAF=0;SAP=263.587;SAR=120;SRF=0;SRP=3764;SRR=1732;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:230:230,0:230:8386:0:0:0,-69.2369,-754.687 0/0:305:304,1:304:10956:1:37:0,-88.1163,-982.173 0/0:365:363,2:363:13132:2:72:0,-103.039,-1174.76 0/0:231:231,0:231:8368:0:0:0,-69.5379,-753.079 0/1:337:262,75:262:9459:75:2679:-139.892,0,-749.768 0/1:384:342,42:342:12373:42:1532:-22.5749,0,-997.733 dDocent_Contig_5376 17 . C T 492.205 . AB=0.125;ABP=432.962;AC=2;AF=0.166667;AN=12;AO=70;CIGAR=2X;DP=1248;DPB=1248;DPRA=1.04074;EPP=155.013;EPPR=1970.78;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.776641;PAO=0;PQA=0;PQR=0;PRO=0;QA=2786;QR=45999;RO=1173;RPL=0;RPP=155.013;RPPR=2550.15;RPR=70;RUN=1;SAF=70;SAP=155.013;SAR=0;SRF=1102;SRP=1970.78;SRR=71;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:140:123,16:123:4759:16:628:-14.8341,0,-386.258 0|0:207:202,5:202:7925:5:196:0,-44.301,-694.888 0|0:284:260,21:260:10192:21:837:0,-9.33593,-841.035 0|1:212:183,28:183:7188:28:1125:-37.6083,0,-582.705 0|0:180:180,0:180:7141:0:0:0,-54.1854,-642.388 0|0:225:225,0:225:8794:0:0:0,-67.7317,-791.016 dDocent_Contig_5377 8 . G A 46612.4 . AB=0.753896;ABP=1045.02;AC=11;AF=0.916667;AN=12;AO=1403;CIGAR=1X4M;DP=1861;DPB=1861;DPRA=0;EPP=3049.59;EPPR=315.702;GTI=0;LEN=1;MEANALT=6.83333;MQM=59.9501;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.961511;PAIREDR=0.986111;PAO=0;PQA=0;PQR=0;PRO=0;QA=53533;QR=5586;RO=144;RPL=0;RPP=3049.59;RPPR=315.702;RPR=1403;RUN=1;SAF=1403;SAP=3049.59;SAR=0;SRF=144;SRP=315.702;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:240:32,30,170:32:1240:30,170:1151,6415:-516.095,-431.367,-524.208,0,-7.51372,-50.6994 1|1:319:31,43,222:31:1200:43,222:1647,8476:-721.857,-596.679,-682.307,-35.9396,0,-67.6904 1|1:342:19,33,272:19:725:33,272:1273,10407:-893.373,-794.566,-844.11,-45.063,0,-22.6682 1|1:314:16,52,233:16:625:52,233:2011,8885:-836.51,-677.5,-713.228,-112.445,0,-93.6879 1|1:332:29,45,257:29:1133:45,257:1745,9800:-843.897,-710.763,-790.363,-48.7118,0,-64.4956 1|1:314:17,43,249:17:663:43,249:1683,9550:-860.73,-729.345,-770.899,-82.0026,0,-61.5449 dDocent_Contig_5379 8 . G A 413.528 . AB=0.232558;ABP=56.4386;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=299;DPB=299;DPRA=0.807512;EPP=46.4397;EPPR=608.851;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.95;PAIREDR=0.992832;PAO=0;PQA=0;PQR=0;PRO=0;QA=775;QR=10704;RO=279;RPL=0;RPP=46.4397;RPPR=608.851;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=279;SRP=608.851;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:48:42,6:42:1622:6:230:-6.61745,0,-131.795 0/0:24:24,0:24:924:0:0:0,-7.22472,-83.4759 0/1:38:24,14:24:918:14:545:-37.9572,0,-71.4974 0/0:33:33,0:33:1271:0:0:0,-9.93399,-114.68 0/0:94:94,0:94:3602:0:0:0,-28.2968,-324.301 0/0:62:62,0:62:2367:0:0:0,-18.6639,-213.242 dDocent_Contig_5380 1 . N G 182.556 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=6.91895;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=54.8;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=0.8;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=189;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=4;SAP=6.91895;SAR=1;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.14617,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:113:-10.536,-0.90309,0 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5381 74 . T C 479.202 . AB=0.121212;ABP=537.653;AC=2;AF=0.166667;AN=12;AO=82;CIGAR=1X;DP=1645;DPB=1645;DPRA=0.587963;EPP=181.071;EPPR=3392.68;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999359;PAO=0;PQA=0;PQR=0;PRO=0;QA=3071;QR=56030;RO=1561;RPL=82;RPP=181.071;RPPR=3392.68;RPR=0;RUN=1;SAF=82;SAP=181.071;SAR=0;SRF=1561;SRP=3392.68;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:187:170,17:170:5870:17:601:0,-1.87902,-473.995 0/0:273:259,13:259:8909:13:476:0,-38.7983,-758.629 0/1:173:154,18:154:5669:18:686:-10.1995,0,-458.373 0/1:256:222,34:222:8032:34:1308:-40.9426,0,-645.7 0/0:349:349,0:349:12706:0:0:0,-105.059,-1143.14 0/0:407:407,0:407:14844:0:0:0,-122.519,-1335.43 dDocent_Contig_5382 35 . C T 3074.88 . AB=0.0519481;ABP=540.069;AC=0;AF=0;AN=12;AO=16;CIGAR=2X;DP=414;DPB=414;DPRA=0;EPP=37.7539;EPPR=600.165;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.3125;PAIREDR=0.621818;PAO=0;PQA=0;PQR=0;PRO=0;QA=637;QR=10983;RO=275;RPL=0;RPP=37.7539;RPPR=600.165;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=275;SRP=600.165;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:39:28,0,11:28:1126:0,11:0,447:-28.8453,-37.2742,-130.063,0,-93.1936,-89.8823 0|0:79:49,2,28:49:1981:2,28:80,1127:-78.1346,-86.2953,-249.017,0,-156.736,-154.897 0|0:51:27,11,13:27:1086:11,13:435,517:-34.4345,-6.76785,-92.9569,0,-53.7086,-85.5887 0|0:67:40,0,27:40:1587:0,27:0,1089:-78.1243,-90.1655,-220.787,0,-131.022,-122.894 0|0:98:76,1,20:76:3033:1,20:41,805:-43.6044,-63.0975,-312.59,0,-246.545,-243.909 0|0:80:55,2,22:55:2170:2,22:81,876:-55.5671,-65.4441,-243.367,0,-171.837,-171.894 dDocent_Contig_5383 17 . T A 54363.8 . AB=0.608861;ABP=300.388;AC=6;AF=0.5;AN=12;AO=1759;CIGAR=2M1X;DP=2889;DPB=2949.67;DPRA=0;EPP=3822.63;EPPR=2230.94;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=69919;QR=40574;RO=1026;RPL=0;RPP=3822.63;RPPR=2230.94;RPR=1759;RUN=1;SAF=1759;SAP=3822.63;SAR=0;SRF=1026;SRP=2230.94;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:325:142,27,156:142:5625:27,156:1065,6182:-466.043,-421.172,-875.995,0,-375.335,-415.991 0|1:336:127,14,195:127:5031:14,195:562,7775:-602.018,-593.941,-1003.79,0,-367.75,-355.357 0|1:370:184,20,163:184:7291:20,163:791,6501:-479.964,-470.263,-1064.32,0,-534.985,-551.009 0|1:570:189,13,359:189:7492:13,359:515,14244:-1115.57,-1130.08,-1742.82,0,-574.278,-508.594 0|1:649:166,17,465:166:6545:17,465:676,18562:-1478.71,-1473.03,-2006.37,0,-482.795,-398.472 0|1:639:218,0,421:218:8590:0,421:0,16655:-1305.29,-1370.91,-2077.56,0,-707.043,-580.309 dDocent_Contig_5384 23 . T G 118.198 . AB=0.102941;ABP=282.364;AC=2;AF=0.166667;AN=12;AO=27;CIGAR=1X;DP=497;DPB=497;DPRA=0.944767;EPP=61.6401;EPPR=1017.09;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1070;QR=18666;RO=467;RPL=0;RPP=61.6401;RPPR=1017.09;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=467;SRP=1017.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:53:45,8:45:1788:8:318:-13.0315,0,-145.182 0/0:40:39,1:39:1549:1:41:0,-7.94663,-135.556 0/1:151:138,13:138:5552:13:514:-1.14916,0,-454.034 0/0:81:76,5:76:2970:5:197:0,-6.28022,-249.292 0/0:76:74,0:74:2964:0:0:0,-22.2762,-266.444 0/0:96:95,0:95:3843:0:0:0,-28.5978,-345.443 dDocent_Contig_5385 98 . N C 63.652 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=2X;DP=2;DPB=3;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=1;PQA=25;PQR=0;PRO=0;QA=70;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:70:-6.36412,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_5386 98 . N T 2709.58 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=90;CIGAR=1X;DP=90;DPB=90;DPRA=0;EPP=198.443;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2980;QR=0;RO=0;RPL=90;RPP=198.443;RPPR=0;RPR=0;RUN=1;SAF=90;SAP=198.443;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:13:0,13:0:0:13:427:-38.7469,-3.91339,0 1/1:29:0,29:0:0:29:956:-86.3432,-8.72987,0 1/1:7:0,7:0:0:7:240:-21.9354,-2.10721,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:25:0,25:0:0:25:841:-76.0011,-7.52575,0 1/1:15:0,15:0:0:15:482:-43.6871,-4.51545,0 dDocent_Contig_5387 107 . N C 340.542 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=11;CIGAR=1X;DP=11;DPB=11;DPRA=0;EPP=26.8965;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0.818182;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=357;QR=0;RO=0;RPL=0;RPP=26.8965;RPPR=0;RPR=11;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:8:0,8:0:0:8:256:-23.3534,-2.40824,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_5388 3 . A G 184.587 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=15;CIGAR=4I1X1M1X2M1X2M1X;DP=15;DPB=23;DPRA=0;EPP=35.5824;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=13;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=10;PQA=381;PQR=77;PRO=2;QA=539;QR=0;RO=0;RPL=0;RPP=35.5824;RPPR=0;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:2:0,2:0:0:2:72:-2.20884,-0.60206,0 1|1:3:0,3:0:0:3:106:-3.63323,-0.90309,0 1|1:1:0,1:0:0:1:36:-1.29794,-0.30103,0 1|1:8:0,8:0:0:8:289:-9.23392,-2.40824,0 .:.:.:.:.:.:.:. 1|1:1:0,1:0:0:1:36:-1.29794,-0.30103,0 dDocent_Contig_5389 8 . G T 11837.5 . AB=0.3474;ABP=271.417;AC=5;AF=0.416667;AN=12;AO=474;CIGAR=1X;DP=1518;DPB=1518;DPRA=0;EPP=1032.29;EPPR=2267.86;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=18184;QR=40069;RO=1043;RPL=0;RPP=1032.29;RPPR=2267.86;RPR=474;RUN=1;SAF=474;SAP=1032.29;SAR=0;SRF=1043;SRP=2267.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:274:142,132:142:5437:132:5063:-373.198,0,-406.839 0/1:294:223,70:223:8567:70:2668:-151.718,0,-682.195 0/1:313:194,119:194:7483:119:4585:-318.471,0,-579.077 0/1:295:186,109:186:7126:109:4186:-288.01,0,-552.398 0/1:151:120,31:120:4613:31:1186:-61.5803,0,-369.754 0/0:191:178,13:178:6843:13:496:0,-12.5117,-570.767 dDocent_Contig_5390 39 . T C 59307.9 . AB=0.0641026;ABP=775.386;AC=0;AF=0;AN=12;AO=30;CIGAR=1X1M1X2M;DP=2206;DPB=2206;DPRA=1.22513;EPP=68.1545;EPPR=541.535;GTI=0;LEN=1;MEANALT=6;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1197;QR=9793;RO=248;RPL=0;RPP=68.1545;RPPR=541.535;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=248;SRP=541.535;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:232:33,0,0,198:33:1295:0,0,198:0,0,7943:-644.496,-654.43,-760.926,-654.43,-760.926,-760.926,0,-106.481,-106.481,-46.8767 0|0:382:18,0,0,363:18:705:0,0,363:0,0,14509:-1240.95,-1246.37,-1304.34,-1246.37,-1304.34,-1304.34,-51.0204,-109.274,-109.274,0 0|0:355:50,0,0,303:50:1970:0,0,303:0,0,12059:-977.892,-992.943,-1155,-992.943,-1155,-1155,0,-162.142,-162.142,-70.9301 0|0:366:41,0,0,324:41:1623:0,0,324:0,0,12938:-1053.2,-1065.54,-1199.12,-1065.54,-1199.12,-1199.12,0,-133.564,-133.564,-36.0305 0|0:403:57,0,74,271:57:2261:0,74,271:0,2924,10797:-926.35,-943.508,-1129.63,-702.916,-889.034,-866.758,-54.4743,-240.595,0,-159.015 0|0:468:49,30,51,335:49:1939:30,51,335:1197,2042,13394:-1097.13,-1013.3,-1163.85,-943.659,-1004.66,-1087.88,-8.6427,-69.6448,0,-67.3764 dDocent_Contig_5392 11 . T C 52.2273 . AB=0.254237;ABP=64.9157;AC=2;AF=0.166667;AN=12;AO=43;CIGAR=4M8I3M1X1M1X;DP=447;DPB=498.6;DPRA=1.18045;EPP=96.3836;EPPR=702.224;GTI=0;LEN=1;MEANALT=2.25;MQM=17.4651;MQMR=59.6273;NS=6;NUMALT=1;ODDS=0;PAIRED=0.837209;PAIREDR=0.97205;PAO=0;PQA=0;PQR=71;PRO=2;QA=1700;QR=12323;RO=322;RPL=0;RPP=96.3836;RPPR=702.224;RPR=43;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=322;SRP=702.224;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:100:83,11:83:3189:11:436:0,-10.2122,-268.699 0|1:64:43,21:43:1654:21:836:-2.45097,0,-129.254 0|0:39:27,0:27:1015:0:0:0,-8.12781,-91.2873 0|1:54:42,9:42:1619:9:348:-5.9687,0,-129.651 0|0:96:85,2:85:3240:2:80:0,-21.0388,-286.26 0|0:94:42,0:42:1606:0:0:0,-12.6433,-144.433 dDocent_Contig_5393 14 . G T 134.153 . AB=0.204819;ABP=128.642;AC=2;AF=0.166667;AN=12;AO=46;CIGAR=2X;DP=610;DPB=610;DPRA=0;EPP=102.898;EPPR=1223.38;GTI=0;LEN=1;MEANALT=1.33333;MQM=21.6739;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1568;QR=21517;RO=562;RPL=0;RPP=102.898;RPPR=1223.38;RPR=46;RUN=1;SAF=0;SAP=102.898;SAR=46;SRF=562;SRP=1223.38;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:92:87,5:87:3366:5:171:0,-17.6914,-293.05 0|0:59:57,2:57:2161:2:69:0,-14.4535,-191.4 0|1:94:79,15:79:3069:15:517:-0.76425,0,-248.041 0|1:72:53,19:53:2053:19:637:-14.934,0,-163.313 0|0:151:149,1:149:5675:1:35:0,-43.2843,-508.427 0|0:142:137,4:137:5193:4:139:0,-34.5118,-459.321 dDocent_Contig_5394 7 . A T 1625.61 . AB=0.24918;ABP=169.673;AC=4;AF=0.333333;AN=12;AO=83;CIGAR=1X;DP=409;DPB=409;DPRA=0;EPP=183.243;EPPR=708.739;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.686747;PAIREDR=0.695385;PAO=0;PQA=0;PQR=0;PRO=0;QA=3149;QR=12418;RO=325;RPL=0;RPP=183.243;RPPR=708.739;RPR=83;RUN=1;SAF=83;SAP=183.243;SAR=0;SRF=325;SRP=708.739;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:60:45,15:45:1720:15:571:-33.6674,0,-136.997 0/1:90:60,30:60:2304:30:1139:-75.7159,0,-180.485 0/1:63:47,16:47:1780:16:618:-36.9952,0,-141.486 0/1:92:77,15:77:2953:15:564:-23.4042,0,-238.245 0/0:37:35,2:35:1332:2:72:0,-4.3022,-113.33 0/0:67:61,5:61:2329:5:185:0,-3.24578,-192.815 dDocent_Contig_5395 27 . C A 498.048 . AB=0.0582011;ABP=323.435;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=3M1X1M;DP=323;DPB=331.4;DPRA=0;EPP=33.4109;EPPR=576.279;GTI=0;LEN=1;MEANALT=2.75;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.857143;PAIREDR=0.515152;PAO=0;PQA=0;PQR=0;PRO=0;QA=566;QR=10378;RO=264;RPL=0;RPP=33.4109;RPPR=576.279;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=264;SRP=576.279;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:40:31,4,4:31:1225:4,4:144,163:-4.16126,-1.73856,-101.382,0,-89.1365,-99.6761 0|0:67:60,4,3:60:2331:4,3:157,118:0,-5.15022,-195.459,-8.35477,-186.956,-198.965 0|0:34:31,3,0:31:1222:3,0:121,0:-1.04518,0,-100.022,-10.3771,-100.925,-110.9 0|0:71:53,11,6:53:2090:11,6:412,244:-17.7932,0,-168.674,-13.6024,-151.857,-183.787 0|0:33:28,5,0:28:1108:5,0:192,0:-7.71545,0,-90.0773,-16.1443,-91.5825,-107.341 0|0:78:61,15,1:61:2402:15,1:559,41:-27.347,0,-193.066,-42.3237,-194.197,-239.634 dDocent_Contig_5396 61 . G A 8565.69 . AB=0.366325;ABP=139.438;AC=6;AF=0.5;AN=12;AO=322;CIGAR=1X;DP=879;DPB=879;DPRA=0;EPP=702.224;EPPR=1212.52;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.984472;PAIREDR=0.965889;PAO=0;PQA=0;PQR=0;PRO=0;QA=12569;QR=22009;RO=557;RPL=322;RPP=702.224;RPPR=1212.52;RPR=0;RUN=1;SAF=322;SAP=702.224;SAR=0;SRF=557;SRP=1212.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:128:85,43:85:3355:43:1686:-113.439,0,-263.485 0/1:187:132,55:132:5209:55:2178:-139.914,0,-412.392 0/1:78:63,15:63:2532:15:601:-30.9496,0,-204.532 0/1:160:76,84:76:2990:84:3285:-247.571,0,-221.035 0/1:169:94,75:94:3640:75:2879:-208.363,0,-276.76 0/1:157:107,50:107:4283:50:1940:-127.554,0,-338.168 dDocent_Contig_5397 61 . G A 233.057 . AB=0.110294;ABP=361.814;AC=2;AF=0.166667;AN=12;AO=48;CIGAR=1X;DP=769;DPB=769;DPRA=0;EPP=107.241;EPPR=1568.64;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.962552;PAO=0;PQA=0;PQR=0;PRO=0;QA=1925;QR=28287;RO=721;RPL=48;RPP=107.241;RPPR=1568.64;RPR=0;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=721;SRP=1568.64;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:98:94,4:94:3682:4:160:0,-14.7171,-316.64 0/0:146:137,9:137:5350:9:364:0,-10.8256,-448.259 0/0:101:98,3:98:3903:3:122:0,-19.0315,-339.895 0/0:152:150,2:150:5850:2:82:0,-37.9769,-518.571 0/1:109:99,10:99:3893:10:400:-3.54763,0,-317.586 0/1:163:143,20:143:5609:20:797:-22.9779,0,-455.59 dDocent_Contig_5398 41 . A G 32.4864 . AB=0.1;ABP=100.292;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=271;DPB=271;DPRA=1.74129;EPP=18.2106;EPPR=576.279;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.579545;PAO=0;PQA=0;PQR=0;PRO=0;QA=283;QR=10385;RO=264;RPL=0;RPP=18.2106;RPPR=576.279;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=264;SRP=576.279;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:39,0:39:1540:0:0:0,-11.7402,-138.837 0/0:69:69,0:69:2750:0:0:0,-20.7711,-247.613 0/0:33:33,0:33:1273:0:0:0,-9.93399,-114.836 0/0:25:25,0:25:965:0:0:0,-7.52575,-87.1363 0/0:35:35,0:35:1368:0:0:0,-10.536,-123.38 0/1:70:63,7:63:2489:7:283:-4.77128,0,-203.084 dDocent_Contig_5399 64 . A G 57.6589 . AB=0.125;ABP=71.4117;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=436;DPB=436;DPRA=0.779592;EPP=31.2394;EPPR=921.543;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.923077;PAIREDR=0.98818;PAO=0;PQA=0;PQR=0;PRO=0;QA=496;QR=16727;RO=423;RPL=13;RPP=31.2394;RPPR=921.543;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=423;SRP=921.543;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:56:49,7:49:1920:7:261:-6.98774,0,-156.142 0/0:91:91,0:91:3622:0:0:0,-27.3937,-326.01 0/0:28:27,1:27:1086:1:35:0,-4.93021,-94.5285 0/0:61:61,0:61:2331:0:0:0,-18.3628,-209.96 0/0:107:102,5:102:4051:5:200:0,-13.8307,-346.184 0/0:93:93,0:93:3717:0:0:0,-27.9958,-334.547 dDocent_Contig_5400 16 . G A 142.335 . AB=0.0941176;ABP=611.15;AC=1;AF=0.0833333;AN=12;AO=66;CIGAR=1X;DP=2920;DPB=2920;DPRA=1.01936;EPP=146.327;EPPR=6196.05;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.999299;PAO=0;PQA=0;PQR=0;PRO=0;QA=2631;QR=112836;RO=2852;RPL=0;RPP=146.327;RPPR=6196.05;RPR=66;RUN=1;SAF=66;SAP=146.327;SAR=0;SRF=2852;SRP=6196.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:383:383,0:383:15098:0:0:0,-115.294,-1357.72 0/0:546:536,9:536:21344:9:358:0,-131.88,-1886.59 0/1:425:385,40:385:15196:40:1594:-15.7564,0,-1238.54 0/0:503:486,17:486:19169:17:679:0,-89.9801,-1662.25 0/0:545:545,0:545:21666:0:0:0,-164.061,-1948.09 0/0:518:517,0:517:20363:0:0:0,-155.633,-1830.93 dDocent_Contig_5401 13 . C T 90.0169 . AB=0.105263;ABP=157.299;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=528;DPB=528;DPRA=1.1;EPP=46.4397;EPPR=1106.12;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.7;PAIREDR=0.281496;PAO=0;PQA=0;PQR=0;PRO=0;QA=816;QR=20411;RO=508;RPL=0;RPP=46.4397;RPPR=1106.12;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=508;SRP=1106.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:114:102,12:102:4115:12:491:-10.2235,0,-335.989 0/0:83:80,3:80:3228:3:122:0,-13.613,-279.198 0/0:81:81,0:81:3253:0:0:0,-24.3834,-292.824 0/0:84:84,0:84:3383:0:0:0,-25.2865,-304.505 0/0:78:74,4:74:2957:4:162:0,-8.51338,-251.25 0/0:88:87,1:87:3475:1:41:0,-22.3961,-308.684 dDocent_Contig_5402 25 . A G 90.6732 . AB=0.111111;ABP=227.637;AC=2;AF=0.166667;AN=12;AO=29;CIGAR=1X;DP=568;DPB=568;DPRA=3.85714;EPP=65.983;EPPR=1171.26;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1079;QR=20797;RO=538;RPL=0;RPP=65.983;RPPR=1171.26;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=538;SRP=1171.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1053:0:0:0,-8.42884,-95.055 0/0:53:52,1:52:2027:1:40:0,-11.9589,-178.638 0/1:41:37,4:37:1462:4:147:-1.2411,0,-119.496 0/1:130:114,15:114:4430:15:549:-10.5778,0,-359.552 0/0:134:130,4:130:5012:4:143:0,-27.1208,-437.795 0/0:182:177,5:177:6813:5:200:0,-36.4079,-594.57 dDocent_Contig_5403 98 . N G 244.701 . AB=0;ABP=0;AC=6;AF=0.75;AN=8;AO=9;CIGAR=1X;DP=10;DPB=10;DPRA=3;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=255;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:1:0,0:0:0:0:0:0,0,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:25:-2.49986,-0.30103,0 1/1:4:0,4:0:0:4:101:-9.3401,-1.20412,0 1/1:4:0,4:0:0:4:129:-11.9295,-1.20412,0 ./.:.:.:.:.:.:.:. dDocent_Contig_5404 1 . N G 125.946 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=5.18177;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=57.75;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=129;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=3;SAP=5.18177;SAR=1;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:89:-8.29651,-0.90309,0 1/1:1:0,1:0:0:1:40:-3.99568,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5405 77 . G A 14931 . AB=0.380515;ABP=205.388;AC=6;AF=0.5;AN=12;AO=621;CIGAR=1X;DP=1632;DPB=1632;DPRA=0;EPP=1351.49;EPPR=2196.2;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=22159;QR=36097;RO=1010;RPL=621;RPP=1351.49;RPPR=2196.2;RPR=0;RUN=1;SAF=621;SAP=1351.49;SAR=0;SRF=1010;SRP=2196.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:200:153,47:153:5345:47:1643:-87.9498,0,-420.992 0/1:253:178,75:178:6251:75:2630:-160.79,0,-486.539 0/1:297:216,80:216:7840:80:2878:-170.004,0,-616.347 0/1:209:178,31:178:6315:31:1113:-37.5639,0,-505.501 0/1:368:192,176:192:6949:176:6311:-457.272,0,-514.659 0/1:305:93,212:93:3397:212:7584:-590.744,0,-214.111 dDocent_Contig_5406 98 . N T 90.7606 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=91;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:65:-6.17303,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:26:-2.59983,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_5407 98 . N A 115.797 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=120;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:4:0,3:0:0:3:89:-8.17768,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5408 44 . G A 64.0619 . AB=0.114286;ABP=138.696;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=294;DPB=294;DPRA=1.11111;EPP=29.068;EPPR=615.366;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.833333;PAO=0;PQA=0;PQR=0;PRO=0;QA=441;QR=11202;RO=282;RPL=0;RPP=29.068;RPPR=615.366;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=282;SRP=615.366;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:36,0:36:1443:0:0:0,-10.8371,-130.119 0/0:56:56,0:56:2241:0:0:0,-16.8577,-201.861 0/0:46:46,0:46:1807:0:0:0,-13.8474,-162.851 0/0:51:51,0:51:2025:0:0:0,-15.3525,-182.441 0/1:55:48,7:48:1898:7:268:-7.92394,0,-154.474 0/1:50:45,5:45:1788:5:173:-0.852606,0,-146.08 dDocent_Contig_5409 21 . C T 123.767 . AB=0.147541;ABP=68.8308;AC=3;AF=0.25;AN=12;AO=9;CIGAR=1X;DP=166;DPB=166;DPRA=0.580952;EPP=22.5536;EPPR=343.931;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.866242;PAO=0;PQA=0;PQR=0;PRO=0;QA=366;QR=6266;RO=157;RPL=0;RPP=22.5536;RPPR=343.931;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=157;SRP=343.931;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:17:15,2:15:605:2:79:-2.38012,0,-49.6694 0/0:27:27,0:27:1087:0:0:0,-8.12781,-98.1171 0/1:31:25,6:25:984:6:246:-13.1882,0,-79.5176 0/0:44:44,0:44:1757:0:0:0,-13.2453,-158.34 0/0:34:34,0:34:1344:0:0:0,-10.235,-121.208 0/1:13:12,1:12:489:1:41:-0.181177,0,-40.4477 dDocent_Contig_5410 122 . G A 372.661 . AB=0.188679;ABP=92.2455;AC=3;AF=0.25;AN=12;AO=22;CIGAR=1X;DP=213;DPB=213;DPRA=1.21774;EPP=50.7827;EPPR=417.762;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.984293;PAO=0;PQA=0;PQR=0;PRO=0;QA=883;QR=7583;RO=191;RPL=22;RPP=50.7827;RPPR=417.762;RPR=0;RUN=1;SAF=0;SAP=50.7827;SAR=22;SRF=0;SRP=417.762;SRR=191;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:19,2:19:740:2:78:-1.08115,0,-60.5841 0/1:42:32,10:32:1295:10:408:-24.4373,0,-104.168 0/1:43:35,8:35:1401:8:318:-16.042,0,-113.395 0/0:45:43,2:43:1707:2:79:0,-6.04911,-146.341 0/0:37:37,0:37:1452:0:0:0,-11.1381,-130.921 0/0:25:25,0:25:988:0:0:0,-7.52575,-89.2165 dDocent_Contig_5411 46 . A T 265.607 . AB=0.162162;ABP=113.051;AC=3;AF=0.25;AN=12;AO=21;CIGAR=1X;DP=258;DPB=258;DPRA=1.57931;EPP=48.6112;EPPR=517.649;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.991561;PAO=0;PQA=0;PQR=0;PRO=0;QA=822;QR=9193;RO=237;RPL=0;RPP=48.6112;RPPR=517.649;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=237;SRP=517.649;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:1133:0:0:0,-8.72987,-102.254 0/1:32:29,3:29:1102:3:115:-1.08942,0,-89.8274 0/0:72:71,1:71:2787:1:38:0,-17.8769,-247.158 0/1:38:31,7:31:1171:7:278:-13.95,0,-94.229 0/0:46:44,2:44:1712:2:82:0,-6.0677,-146.534 0/1:41:33,8:33:1288:8:309:-15.8237,0,-103.849 dDocent_Contig_5412 94 . T C 8294.98 . AB=0.680346;ABP=133.81;AC=6;AF=0.5;AN=12;AO=315;CIGAR=1X;DP=463;DPB=463;DPRA=0;EPP=687.024;EPPR=324.388;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.971429;PAIREDR=0.945946;PAO=0;PQA=0;PQR=0;PRO=0;QA=10871;QR=5040;RO=148;RPL=315;RPP=687.024;RPPR=324.388;RPR=0;RUN=1;SAF=315;SAP=687.024;SAR=0;SRF=148;SRP=324.388;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:53:10,43:10:336:43:1494:-118.802,0,-14.6113 0/1:89:33,56:33:1105:56:1939:-147.999,0,-72.9583 0/1:74:29,45:29:972:45:1530:-115.714,0,-65.5064 0/1:82:24,58:24:832:58:2015:-156.944,0,-50.5141 0/1:68:16,52:16:559:52:1789:-140.825,0,-30.1697 0/1:97:36,61:36:1236:61:2104:-160.436,0,-82.3422 dDocent_Contig_5413 13 . G T 586.945 . AB=0.178378;ABP=169.228;AC=2;AF=0.166667;AN=12;AO=37;CIGAR=1X;DP=789;DPB=789;DPRA=0.646802;EPP=83.3548;EPPR=1633.79;GTI=0;LEN=1;MEANALT=1.25;MQM=58.7838;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.891892;PAIREDR=0.998668;PAO=0;PQA=0;PQR=0;PRO=0;QA=1466;QR=29926;RO=751;RPL=0;RPP=83.3548;RPPR=1633.79;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=751;SRP=1633.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:150:150,0:150:5977:0:0:0,-45.1545,-537.712 0/0:194:194,0:194:7721:0:0:0,-58.3998,-694.495 0/0:107:104,3:104:4167:3:121:0,-20.9302,-363.712 0/0:153:151,1:151:5985:1:39:0,-42.2766,-534.549 0/1:104:92,12:92:3670:12:470:-10.7476,0,-299.008 0/1:81:60,21:60:2406:21:836:-51.1688,0,-192.302 dDocent_Contig_5414 13 . C T 14794.8 . AB=0.46488;ABP=14.6022;AC=6;AF=0.5;AN=12;AO=503;CIGAR=1X;DP=1082;DPB=1082;DPRA=0;EPP=1095.26;EPPR=1258.12;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=20181;QR=23208;RO=578;RPL=0;RPP=1095.26;RPPR=1258.12;RPR=503;RUN=1;SAF=503;SAP=1095.26;SAR=0;SRF=578;SRP=1258.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:119:75,44:75:3032:44:1757:-122.516,0,-237.13 0/1:302:159,143:159:6371:143:5725:-424.131,0,-482.204 0/1:191:89,102:89:3602:102:4093:-310.832,0,-266.683 0/1:210:100,110:100:4018:110:4413:-333.888,0,-298.379 0/1:138:84,53:84:3392:53:2129:-150.131,0,-263.66 0/1:122:71,51:71:2793:51:2064:-149.207,0,-214.75 dDocent_Contig_5415 98 . N G 656.312 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=22;CIGAR=1X;DP=22;DPB=22;DPRA=0;EPP=50.7827;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=705;QR=0;RO=0;RPL=22;RPP=50.7827;RPPR=0;RPR=0;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:118:-10.9122,-1.20412,0 1/1:7:0,7:0:0:7:228:-20.8398,-2.10721,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:9:0,9:0:0:9:305:-27.7796,-2.70927,0 1/1:1:0,1:0:0:1:19:-1.89997,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_5416 94 . C T 178.614 . AB=0.129187;ABP=252.626;AC=1;AF=0.0833333;AN=12;AO=34;CIGAR=1X;DP=697;DPB=697;DPRA=1.22684;EPP=76.8404;EPPR=1442.7;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1154;QR=22608;RO=663;RPL=34;RPP=76.8404;RPPR=1442.7;RPR=0;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=663;SRP=1442.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:104:104,0:104:3513:0:0:0,-31.3071,-316.396 0/0:78:74,4:74:2531:4:139:0,-10.6277,-215.198 0/0:84:84,0:84:2869:0:0:0,-25.2865,-258.459 0/0:97:94,3:94:3257:3:104:0,-19.4968,-283.664 0/0:125:125,0:125:4244:0:0:0,-37.6287,-382.165 0/1:209:182,27:182:6194:27:911:-19.3843,0,-494.685 dDocent_Contig_5417 1 . N G 4519.79 . AB=0.868421;ABP=47.8112;AC=12;AF=1;AN=12;AO=146;CIGAR=1X1M;DP=152;DPB=152;DPRA=0;EPP=262.159;EPPR=0;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=0;NS=6;NUMALT=2;ODDS=0;PAIRED=0.00684932;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4977;QR=0;RO=0;RPL=0;RPP=320.045;RPPR=0;RPR=146;RUN=1;SAF=7;SAP=262.159;SAR=139;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:15:0,0,15:0:0:0,15:0,502:-45.4985,-45.4985,-45.4985,-4.51545,-4.51545,0 1|1:40:0,0,40:0:0:0,40:0,1385:-124.936,-124.936,-124.936,-12.0412,-12.0412,0 1|1:14:0,1,13:0:0:1,13:35,435:-39.1219,-36.2731,-35.9721,-3.91339,-0.715791,0 1|1:38:0,5,33:0:0:5,33:169,1150:-107.572,-93.8739,-92.3688,-14.0378,0,-4.10383 1|1:22:0,0,22:0:0:0,22:0,744:-67.2744,-67.2744,-67.2744,-6.62266,-6.62266,0 1|1:23:0,0,23:0:0:0,23:0,761:-68.796,-68.796,-68.796,-6.92369,-6.92369,0 dDocent_Contig_5418 9 . G A 197.305 . AB=0.113043;ABP=302.145;AC=1;AF=0.0833333;AN=12;AO=44;CIGAR=1X;DP=1171;DPB=1171;DPRA=0.945183;EPP=98.5551;EPPR=2450.26;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.991127;PAO=0;PQA=0;PQR=0;PRO=0;QA=1693;QR=42866;RO=1127;RPL=0;RPP=98.5551;RPPR=2450.26;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=1127;SRP=2450.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:142:132,10:132:5012:10:388:0,-7.46837,-415.819 0/0:170:170,0:170:6495:0:0:0,-51.1751,-584.469 0/1:230:204,26:204:7714:26:1002:-21.2533,0,-624.861 0/0:197:189,8:189:7119:8:303:0,-31.6751,-612.958 0/0:268:268,0:268:10259:0:0:0,-80.676,-922.949 0/0:164:164,0:164:6267:0:0:0,-49.3689,-563.962 dDocent_Contig_5419 20 . A T 12198.1 . AB=0.406812;ABP=82.7385;AC=2;AF=0.166667;AN=12;AO=439;CIGAR=1X;DP=1562;DPB=1562;DPRA=3.91195;EPP=956.287;EPPR=2439.4;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0022779;PAIREDR=0.998217;PAO=0;PQA=0;PQR=0;PRO=0;QA=17500;QR=44773;RO=1122;RPL=0;RPP=956.287;RPPR=2439.4;RPR=439;RUN=1;SAF=439;SAP=956.287;SAR=0;SRF=1122;SRP=2439.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:87:87,0:87:3456:0:0:0,-26.1896,-311.093 0/0:187:178,9:178:7094:9:366:0,-22.9877,-604.809 0/0:113:113,0:113:4484:0:0:0,-34.0164,-403.49 0/0:118:118,0:118:4700:0:0:0,-35.5215,-422.909 0/1:586:369,217:369:14759:217:8611:-598.071,0,-1150.77 0/1:471:257,213:257:10280:213:8523:-624.959,0,-782.937 dDocent_Contig_5420 47 . C T 117.471 . AB=0.156863;ABP=55.1682;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=285;DPB=285;DPRA=1.25714;EPP=24.725;EPPR=600.165;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.9;PAIREDR=0.949091;PAO=0;PQA=0;PQR=0;PRO=0;QA=395;QR=11034;RO=275;RPL=0;RPP=24.725;RPPR=600.165;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=275;SRP=600.165;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1311:0:0:0,-9.93399,-118.254 0/0:38:38,0:38:1522:0:0:0,-11.4391,-137.221 0/1:51:43,8:43:1717:8:314:-13.27,0,-139.397 0/0:59:57,2:57:2277:2:81:0,-10.075,-197.411 0/0:60:60,0:60:2421:0:0:0,-18.0618,-218.031 0/0:44:44,0:44:1786:0:0:0,-13.2453,-160.947 dDocent_Contig_5421 14 . G A 3754.11 . AB=0.467391;ABP=5.55942;AC=2;AF=0.166667;AN=12;AO=129;CIGAR=1X;DP=387;DPB=387;DPRA=4.97297;EPP=283.13;EPPR=563.25;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996124;PAO=0;PQA=0;PQR=0;PRO=0;QA=5127;QR=10325;RO=258;RPL=0;RPP=283.13;RPPR=563.25;RPR=129;RUN=1;SAF=129;SAP=283.13;SAR=0;SRF=258;SRP=563.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1086:0:0:0,-8.12781,-98.0254 0/0:16:16,0:16:643:0:0:0,-4.81648,-58.2041 0/0:29:29,0:29:1159:0:0:0,-8.72987,-104.588 0/0:39:39,0:39:1554:0:0:0,-11.7402,-140.094 0/1:124:87,37:87:3506:37:1465:-94.7763,0,-278.239 0/1:152:60,92:60:2377:92:3662:-283.856,0,-168.332 dDocent_Contig_5422 68 . T C 1395.48 . AB=0.252669;ABP=152.316;AC=4;AF=0.333333;AN=12;AO=78;CIGAR=1X;DP=399;DPB=399;DPRA=0;EPP=172.385;EPPR=700.053;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75641;PAIREDR=0.825545;PAO=0;PQA=0;PQR=0;PRO=0;QA=2819;QR=11689;RO=321;RPL=78;RPP=172.385;RPPR=700.053;RPR=0;RUN=1;SAF=78;SAP=172.385;SAR=0;SRF=321;SRP=700.053;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:53:35,18:35:1223:18:634:-41.4299,0,-94.4099 0/1:70:51,19:51:1861:19:689:-41.2675,0,-146.692 0/0:60:56,4:56:2079:4:152:0,-4.01228,-173.302 0/1:73:49,24:49:1835:24:871:-56.7352,0,-143.43 0/0:58:55,3:55:1983:3:111:0,-7.10582,-168.378 0/1:85:75,10:75:2708:10:362:-7.33707,0,-218.363 dDocent_Contig_5424 30 . C T 137.073 . AB=0.166667;ABP=55.1256;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=250;DPB=250;DPRA=1.37755;EPP=22.5536;EPPR=526.335;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.576763;PAO=0;PQA=0;PQR=0;PRO=0;QA=346;QR=9528;RO=241;RPL=0;RPP=22.5536;RPPR=526.335;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=241;SRP=526.335;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:32,0:32:1226:0:0:0,-9.63296,-110.619 0/0:42:42,0:42:1684:0:0:0,-12.6433,-151.787 0/0:26:26,0:26:1029:0:0:0,-7.82678,-92.9074 0/0:46:46,0:46:1814:0:0:0,-13.8474,-163.482 0/0:50:50,0:50:1992:0:0:0,-15.0515,-179.484 0/1:54:45,9:45:1783:9:346:-15.2302,0,-144.435 dDocent_Contig_5425 8 . G C 796.621 . AB=0.114458;ABP=1074.62;AC=1;AF=0.0833333;AN=12;AO=292;CIGAR=1X;DP=5122;DPB=5122;DPRA=1.23509;EPP=637.08;EPPR=10486.9;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=59.8616;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997307;PAO=0;PQA=0;PQR=0;PRO=0;QA=11230;QR=183372;RO=4828;RPL=0;RPP=637.08;RPPR=10486.9;RPR=292;RUN=1;SAF=292;SAP=637.08;SAR=0;SRF=4828;SRP=10486.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:830:734,95:734:27707:95:3674:-80.884,0,-2219.09 0/0:976:912,63:912:34703:63:2427:0,-75.2592,-2897.16 0/0:821:768,53:768:29091:53:2014:0,-65.6506,-2435.02 0/0:1019:938,81:938:35658:81:3115:0,-26.2441,-2926.55 0/0:690:690,0:690:26346:0:0:0,-207.711,-2369.64 0/0:786:786,0:786:29867:0:0:0,-236.61,-2686.3 dDocent_Contig_5426 40 . C T 2534.06 . AB=0.150478;ABP=1335.78;AC=4;AF=0.333333;AN=12;AO=189;CIGAR=1X;DP=2033;DPB=2033;DPRA=0.808237;EPP=413.419;EPPR=4005.03;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.994709;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7086;QR=72148;RO=1843;RPL=0;RPP=413.419;RPPR=4005.03;RPR=189;RUN=1;SAF=189;SAP=413.419;SAR=0;SRF=1843;SRP=4005.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:275:229,46:229:8948:46:1696:-70.1041,0,-722.077 0/1:334:270,64:270:10507:64:2445:-119.703,0,-844.468 0/1:383:339,44:339:13264:44:1648:-33.2838,0,-1077.58 0/1:264:229,35:229:9039:35:1297:-37.5365,0,-733.536 0/0:359:359,0:359:14115:0:0:0,-108.07,-1269.37 0/0:418:417,0:417:16275:0:0:0,-125.53,-1463.52 dDocent_Contig_5427 10 . T A 7815.59 . AB=0.262804;ABP=585.032;AC=4;AF=0.333333;AN=12;AO=321;CIGAR=1X3M;DP=2083;DPB=2083;DPRA=0;EPP=674.239;EPPR=3438.47;GTI=0;LEN=1;MEANALT=3.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.981308;PAIREDR=0.991905;PAO=0;PQA=0;PQR=0;PRO=0;QA=12610;QR=62528;RO=1606;RPL=0;RPP=700.053;RPPR=3490.39;RPR=321;RUN=1;SAF=318;SAP=674.239;SAR=3;SRF=1600;SRP=3438.47;SRR=6;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:248:145,17,83:145:5655:17,83:653,3214:-220.335,-210.384,-670.085,0,-411.221,-439.835 0|1:345:220,52,73:220:8551:52,73:2019,2885:-171.167,-71.5098,-758.49,0,-536.753,-680.664 0|1:168:117,11,40:117:4583:11,40:424,1616:-98.0181,-98.4323,-471.959,0,-342.043,-364.811 0|1:430:257,51,117:257:9956:51,117:1982,4581:-299.261,-213.765,-1016.24,0,-654.965,-782.607 0|0:469:456,0,3:456:17738:0,3:0,111:0,-137.27,-1594.9,-128.196,-1585.82,-1584.92 0|0:423:411,0,5:411:16045:0,5:0,203:0,-123.723,-1442.66,-106.974,-1425.91,-1424.41 dDocent_Contig_5428 43 . T C 134.759 . AB=0.100977;ABP=427.579;AC=2;AF=0.166667;AN=12;AO=34;CIGAR=1X;DP=935;DPB=935;DPRA=0.885081;EPP=76.8404;EPPR=1959.51;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.970588;PAIREDR=0.952275;PAO=0;PQA=0;PQR=0;PRO=0;QA=1328;QR=36011;RO=901;RPL=0;RPP=76.8404;RPPR=1959.51;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=901;SRP=1959.51;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:134:134,0:134:5324:0:0:0,-40.338,-479.005 0/0:152:152,0:152:6081:0:0:0,-45.7566,-547.051 0/0:132:129,3:129:5186:3:123:0,-28.2712,-455.121 0/0:210:210,0:210:8423:0:0:0,-63.2163,-757.57 0/1:151:137,14:137:5461:14:545:-3.93159,0,-445.865 0/1:156:139,17:139:5536:17:660:-12.7653,0,-451.103 dDocent_Contig_5429 107 . N G 322.781 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=11;CIGAR=1X;DP=11;DPB=11;DPRA=0;EPP=26.8965;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=331;QR=0;RO=0;RPL=0;RPP=26.8965;RPPR=0;RPR=11;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:89:-8.30408,-0.90309,0 1/1:3:0,3:0:0:3:100:-9.33066,-0.90309,0 1/1:1:0,1:0:0:1:10:-0.999996,-0.30103,0 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 1/1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 dDocent_Contig_5430 19 . C T 185.668 . AB=0.0906375;ABP=1464.39;AC=1;AF=0.0833333;AN=12;AO=94;CIGAR=1X;DP=5239;DPB=5239;DPRA=1.07814;EPP=207.129;EPPR=11168.7;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999417;PAO=0;PQA=0;PQR=0;PRO=0;QA=3703;QR=204315;RO=5142;RPL=0;RPP=207.129;RPPR=11168.7;RPR=94;RUN=1;SAF=94;SAP=207.129;SAR=0;SRF=5142;SRP=11168.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:705:705,0:705:28057:0:0:0,-212.226,-2522.64 0/0:831:827,3:827:32745:3:122:0,-238.666,-2932.83 0/0:914:913,0:913:36321:0:0:0,-274.84,-3265.41 0/0:901:901,0:901:35840:0:0:0,-271.228,-3222.32 0/0:884:883,0:883:35088:0:0:0,-265.809,-3154.31 0/1:1004:913,91:913:36264:91:3581:-20.0897,0,-2958.22 dDocent_Contig_5431 23 . G T 132.592 . AB=0.1875;ABP=43.7254;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=348;DPB=348;DPRA=0.637255;EPP=46.4397;EPPR=715.253;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.3;PAIREDR=0.594512;PAO=0;PQA=0;PQR=0;PRO=0;QA=655;QR=12786;RO=328;RPL=0;RPP=46.4397;RPPR=715.253;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=328;SRP=715.253;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:45:42,3:42:1649:3:92:0,-4.96452,-140.065 0/0:82:82,0:82:3196:0:0:0,-24.6845,-287.728 0/0:40:36,4:36:1414:4:105:0,-2.33142,-117.794 0/0:71:71,0:71:2731:0:0:0,-21.3731,-245.914 0/1:48:39,9:39:1547:9:321:-14.782,0,-125.018 0/0:62:58,4:58:2249:4:137:0,-5.99623,-189.916 dDocent_Contig_5432 23 . C G 108.043 . AB=0.0677966;ABP=98.7391;AC=0;AF=0;AN=12;AO=6;CIGAR=4M1X12M;DP=343;DPB=339.471;DPRA=1.24183;EPP=16.0391;EPPR=682.681;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.552716;PAO=0;PQA=0;PQR=0;PRO=0;QA=239;QR=12233;RO=313;RPL=0;RPP=16.0391;RPPR=682.681;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=313;SRP=682.681;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:57:54,0,1,0:54:2115:0,1,0:0,35,0:0,-16.2556,-190.175,-13.4245,-187.328,-187.027,-16.2556,-190.175,-187.328,-190.175 0|0:59:46,0,4,8:46:1800:0,4,8:0,163,318:-12.3272,-26.1745,-174.16,-12.7242,-160.712,-159.508,0,-147.98,-134.531,-145.572 0|0:48:44,2,0,1:44:1712:2,0,1:77,0,41:0,-6.93284,-147.005,-13.2453,-147.607,-153.929,-9.85629,-144.223,-150.545,-150.244 0|0:36:33,2,0,0:33:1288:2,0,0:63,0,0:0,-4.88398,-110.208,-9.93399,-110.81,-115.873,-9.93399,-110.81,-115.873,-115.873 0|0:69:66,0,0,0:66:2567:0,0,0:0,0,0:0,-19.868,-230.792,-19.868,-230.792,-230.792,-19.868,-230.792,-230.792,-230.792 0|0:74:70,0,1,0:70:2751:0,1,0:0,41,0:0,-21.0721,-247.415,-17.6581,-244.031,-243.73,-21.0721,-247.415,-244.031,-247.415 dDocent_Contig_5433 19 . A G 1141.45 . AB=0.193443;ABP=251.975;AC=2;AF=0.166667;AN=12;AO=59;CIGAR=1X;DP=538;DPB=538;DPRA=2.61803;EPP=131.127;EPPR=1000.17;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.979123;PAO=0;PQA=0;PQR=0;PRO=0;QA=2318;QR=18697;RO=479;RPL=0;RPP=131.127;RPPR=1043.15;RPR=59;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=474;SRP=1000.17;SRR=5;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:47:47,0:47:1818:0:0:0,-14.1484,-163.849 0/0:60:60,0:60:2316:0:0:0,-18.0618,-208.623 0/0:35:35,0:35:1342:0:0:0,-10.536,-121.039 0/0:91:91,0:91:3591:0:0:0,-27.3937,-323.24 0/1:132:119,13:119:4622:13:506:-6.14453,0,-376.212 0/1:173:127,46:127:5008:46:1812:-111.222,0,-398.545 dDocent_Contig_5434 50 . T C 79292.4 . AB=0.879184;ABP=1532.86;AC=9;AF=0.75;AN=12;AO=2451;CIGAR=1X;DP=2660;DPB=2660;DPRA=0;EPP=5325.29;EPPR=448.162;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999592;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=94647;QR=7984;RO=205;RPL=2451;RPP=5325.29;RPPR=448.162;RPR=0;RUN=1;SAF=2451;SAP=5325.29;SAR=0;SRF=205;SRP=448.162;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:333:42,291:42:1636:291:10967:-886.281,0,-47.2347 1/1:406:28,377:28:1087:377:14454:-1201.89,-24.0304,0 1/1:550:19,530:19:755:530:20458:-1771.52,-97.1924,0 0/1:449:42,407:42:1618:407:15824:-1287.97,0,-10.7054 0/1:443:62,379:62:2413:379:14733:-1192.18,0,-84.4831 1/1:479:12,467:12:475:467:18211:-1594.62,-101.095,0 dDocent_Contig_5435 13 . T C 4004.5 . AB=0.371501;ABP=59.3747;AC=6;AF=0.5;AN=12;AO=146;CIGAR=1X;DP=393;DPB=393;DPRA=0;EPP=320.045;EPPR=539.364;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.869863;PAIREDR=0.931174;PAO=0;PQA=0;PQR=0;PRO=0;QA=5869;QR=9810;RO=247;RPL=0;RPP=320.045;RPPR=539.364;RPR=146;RUN=1;SAF=146;SAP=320.045;SAR=0;SRF=247;SRP=539.364;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:63:43,20:43:1719:20:816:-54.7888,0,-135.963 0/1:67:56,11:56:2218:11:435:-19.3327,0,-179.618 0/1:70:53,17:53:2102:17:688:-41.1776,0,-168.278 0/1:63:44,19:44:1772:19:775:-51.1036,0,-140.723 0/1:74:33,41:33:1292:41:1623:-124.01,0,-94.2693 0/1:56:18,38:18:707:38:1532:-121.259,0,-47.0946 dDocent_Contig_5436 34 . T A 58.1598 . AB=0.103093;ABP=135.739;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=580;DPB=580;DPRA=1.19559;EPP=26.8965;EPPR=688.265;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.776014;PAO=0;PQA=0;PQR=0;PRO=0;QA=443;QR=22371;RO=567;RPL=0;RPP=26.8965;RPPR=1234.24;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=495;SRP=688.265;SRR=72;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:71:71,0:71:2783:0:0:0,-21.3731,-250.594 0/1:97:87,10:87:3454:10:402:-7.33886,0,-281.703 0/0:99:99,0:99:3903:0:0:0,-29.802,-351.272 0/0:88:88,0:88:3486:0:0:0,-26.4906,-313.79 0/0:105:105,0:105:4091:0:0:0,-31.6081,-368.192 0/0:120:117,1:117:4654:1:41:0,-31.7915,-414.776 dDocent_Contig_5438 7 . A T 12080.6 . AB=0.472373;ABP=9.12948;AC=2;AF=0.166667;AN=12;AO=436;CIGAR=1X;DP=1815;DPB=1815;DPRA=2.06951;EPP=949.772;EPPR=2990.96;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997093;PAO=0;PQA=0;PQR=0;PRO=0;QA=16547;QR=52108;RO=1376;RPL=0;RPP=949.772;RPPR=2990.96;RPR=436;RUN=1;SAF=436;SAP=949.772;SAR=0;SRF=1376;SRP=2990.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:252:251,0:251:9583:0:0:0,-75.5585,-861.785 0/0:253:253,0:253:9600:0:0:0,-76.1606,-863.707 0/0:203:203,0:203:7738:0:0:0,-61.1091,-696.247 0/0:184:184,0:184:6911:0:0:0,-55.3895,-621.899 0/1:465:225,239:225:8412:239:9045:-673.925,0,-617.025 0/1:458:260,197:260:9864:197:7502:-537.356,0,-749.776 dDocent_Contig_5439 30 . T C 685.998 . AB=0.127451;ABP=125.975;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X4M1I2M2X10M;DP=392;DPB=395.421;DPRA=0.894737;EPP=31.2394;EPPR=682.681;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0.538462;PAIREDR=0.619808;PAO=0;PQA=0;PQR=0;PRO=0;QA=504;QR=12362;RO=313;RPL=0;RPP=31.2394;RPPR=682.681;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=313;SRP=682.681;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:62:52,0,8,0,1:52:2051:0,8,0,1:0,301,0,41:-9.1013,-24.7549,-193.54,0,-168.884,-166.475,-24.7549,-193.54,-168.884,-193.54,-21.3644,-190.155,-165.499,-190.155,-189.854 0|0:73:59,0,10,0,4:59:2335:0,10,0,4:0,365,0,161:-12.0238,-29.7845,-221.977,0,-192.17,-189.16,-29.7845,-221.977,-192.17,-221.977,-16.5051,-208.708,-178.901,-208.708,-207.504 0|0:57:51,0,3,0,0:51:2017:0,3,0,0:0,118,0,0:0,-15.3525,-181.391,-5.59755,-171.684,-170.781,-15.3525,-181.391,-171.684,-181.391,-15.3525,-181.391,-171.684,-181.391,-181.391 0|0:98:88,0,9,0,0:88:3461:0,9,0,0:0,337,0,0:-1.35102,-27.8417,-312.576,0,-284.982,-282.273,-27.8417,-312.576,-284.982,-312.576,-27.8417,-312.576,-284.982,-312.576,-312.576 0|1:49:28,10,0,8,3:28:1106:10,0,8,3:390,0,293,122:-23.632,0,-88.0133,-32.0609,-91.0236,-123.078,-8.13465,-67.093,-99.1463,-96.7381,-21.9938,-80.959,-113.014,-89.0821,-112.111 0|0:53:35,3,13,1,0:35:1392:3,13,1,0:114,506,39,0:-31.0487,-32.2383,-145.954,0,-105.276,-110.709,-38.3788,-143.651,-111.417,-152.698,-41.5847,-146.857,-114.622,-152.999,-156.204 dDocent_Contig_5440 26 . G A 2891.52 . AB=0.195918;ABP=593.323;AC=6;AF=0.5;AN=12;AO=144;CIGAR=1X;DP=735;DPB=735;DPRA=0;EPP=315.702;EPPR=1286.35;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9915;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99154;PAO=0;PQA=0;PQR=0;PRO=0;QA=5776;QR=23198;RO=591;RPL=0;RPP=315.702;RPPR=1286.35;RPR=144;RUN=1;SAF=144;SAP=315.702;SAR=0;SRF=591;SRP=1286.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:66:47,19:47:1825:19:754:-48.3113,0,-144.604 0/1:133:112,21:112:4417:21:837:-35.5988,0,-357.451 0/1:123:95,28:95:3762:28:1128:-64.7743,0,-301.559 0/1:150:121,29:121:4749:29:1169:-60.3337,0,-382.17 0/1:141:111,30:111:4360:30:1201:-65.9213,0,-349.918 0/1:122:105,17:105:4085:17:687:-25.4341,0,-330.928 dDocent_Contig_5441 180 . A T 16011.8 . AB=0.552361;ABP=26.2054;AC=6;AF=0.5;AN=12;AO=538;CIGAR=1X;DP=974;DPB=974;DPRA=0;EPP=1171.26;EPPR=947.601;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.996283;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=21168;QR=16839;RO=435;RPL=538;RPP=1171.26;RPPR=947.601;RPR=0;RUN=1;SAF=0;SAP=1171.26;SAR=538;SRF=0;SRP=947.601;SRR=435;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:81:36,45:36:1396:45:1774:-135.502,0,-101.529 0/1:172:84,88:84:3284:88:3478:-261.299,0,-243.888 0/1:114:56,58:56:2175:58:2293:-172.212,0,-161.636 0/1:169:85,84:85:3335:84:3306:-246.74,0,-249.373 0/1:189:87,102:87:3334:102:3940:-297.71,0,-243.271 0/1:249:87,161:87:3315:161:6377:-498.934,0,-223.7 dDocent_Contig_5442 43 . G C 2465.71 . AB=0.159619;ABP=955.006;AC=6;AF=0.5;AN=12;AO=151;CIGAR=1X;DP=946;DPB=946;DPRA=0;EPP=330.903;EPPR=1729.33;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.993377;PAIREDR=0.991195;PAO=0;PQA=0;PQR=0;PRO=0;QA=6009;QR=31389;RO=795;RPL=0;RPP=330.903;RPPR=1729.33;RPR=151;RUN=1;SAF=151;SAP=330.903;SAR=0;SRF=795;SRP=1729.33;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:141:123,18:123:4842:18:716:-22.3182,0,-393.251 0/1:170:149,21:149:5939:21:832:-24.0161,0,-483.113 0/1:77:69,8:69:2721:8:321:-6.07823,0,-221.828 0/1:190:172,18:172:6810:18:717:-7.6608,0,-555.412 0/1:189:157,32:157:6089:32:1253:-56.1352,0,-490.902 0/1:179:125,54:125:4988:54:2170:-141.584,0,-394.9 dDocent_Contig_5443 10 . T A 33057.2 . AB=0.506358;ABP=3.78343;AC=6;AF=0.5;AN=12;AO=1115;CIGAR=1X;DP=2202;DPB=2202;DPRA=0;EPP=2424.2;EPPR=2361.23;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=59.9834;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=44244;QR=43147;RO=1086;RPL=0;RPP=2424.2;RPPR=2361.23;RPR=1115;RUN=1;SAF=1115;SAP=2424.2;SAR=0;SRF=1086;SRP=2361.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:311:157,153:157:6270:153:6110:-455.942,0,-470.326 0/1:503:252,251:252:9967:251:9969:-745.199,0,-744.984 0/1:351:181,170:181:7145:170:6742:-500.839,0,-537.059 0/1:498:227,271:227:9024:271:10791:-820.594,0,-661.72 0/1:202:123,79:123:4905:79:3076:-216.126,0,-380.486 0/1:337:146,191:146:5836:191:7556:-578.242,0,-423.585 dDocent_Contig_5444 8 . G A 35496.9 . AB=0.828152;ABP=1086.12;AC=7;AF=0.583333;AN=12;AO=1155;CIGAR=1X;DP=1370;DPB=1370;DPRA=0;EPP=2511.06;EPPR=467.705;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=44051;QR=8181;RO=214;RPL=0;RPP=2511.06;RPPR=467.705;RPR=1155;RUN=1;SAF=1155;SAP=2511.06;SAR=0;SRF=214;SRP=467.705;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:243:57,186:57:2133:186:7061:-562.225,0,-119.049 0/1:206:21,185:21:814:185:7041:-571.562,0,-11.5732 1/1:212:16,196:16:620:196:7458:-614.929,-7.67838,0 0/1:267:68,199:68:2629:199:7618:-605.081,0,-156.423 0/1:195:28,166:28:1071:166:6366:-514.067,0,-37.906 0/1:247:24,223:24:914:223:8507:-691.051,0,-8.22078 dDocent_Contig_5445 45 . A G 49.4867 . AB=0.148148;ABP=32.0437;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=297;DPB=297;DPRA=0.663677;EPP=16.0391;EPPR=632.737;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.982759;PAO=0;PQA=0;PQR=0;PRO=0;QA=239;QR=11465;RO=290;RPL=0;RPP=16.0391;RPPR=632.737;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=290;SRP=632.737;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:42:42,0:42:1679:0:0:0,-12.6433,-151.335 0/0:77:77,0:77:3044:0:0:0,-23.1793,-274.042 0/0:39:39,0:39:1518:0:0:0,-11.7402,-136.858 0/0:65:64,0:64:2535:0:0:0,-19.2659,-227.963 0/1:27:23,4:23:895:4:158:-6.47155,0,-72.7233 0/0:47:45,2:45:1794:2:81:0,-6.46268,-153.987 dDocent_Contig_5446 14 . T C 162.034 . AB=0.0993789;ABP=227.454;AC=3;AF=0.25;AN=12;AO=17;CIGAR=1X2M1X3M;DP=233;DPB=227.286;DPRA=0.965;EPP=39.9253;EPPR=448.162;GTI=0;LEN=1;MEANALT=1.8;MQM=43.6471;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.117647;PAIREDR=0.512195;PAO=0;PQA=0;PQR=0;PRO=0;QA=670;QR=8046;RO=205;RPL=0;RPP=39.9253;RPPR=448.162;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=205;SRP=448.162;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:31:24,1,5:24:951:1,5:41,200:-9.25229,-13.3189,-91.287,0,-75.1123,-76.7672 0|1:33:25,5,3:25:982:5,3:195,116:-7.43359,0,-79.2658,-5.4238,-71.2436,-85.3081 0|0:32:29,1,2:29:1150:1,2:40,49:0,-5.38326,-99.8837,-5.02541,-96.387,-99.0801 0|1:43:39,4,0:39:1531:4,0:155,0:-0.755254,0,-125.1,-12.4954,-126.304,-138.427 0|0:40:40,0,0:40:1559:0,0:0,0:0,-12.0412,-140.564,-12.0412,-140.564,-140.564 0|1:54:48,6,0:48:1873:6,0:239,0:-4.73514,0,-152.537,-19.1846,-154.343,-173.145 dDocent_Contig_5447 13 . G C 6384.28 . AB=0.1226;ABP=840.554;AC=0;AF=0;AN=12;AO=83;CIGAR=2X;DP=677;DPB=677;DPRA=0;EPP=183.243;EPPR=784.74;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.831325;PAIREDR=0.880556;PAO=0;PQA=0;PQR=0;PRO=0;QA=3333;QR=14086;RO=360;RPL=0;RPP=183.243;RPPR=784.74;RPR=83;RUN=1;SAF=83;SAP=183.243;SAR=0;SRF=360;SRP=784.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:85:45,17,23:45:1758:17,23:678,921:-62.3261,-20.0381,-159.428,0,-88.6711,-137.585 0|0:154:67,21,66:67:2584:21,66:847,2592:-192.987,-143.335,-349.156,0,-142.311,-192.265 0|0:106:57,21,27:57:2187:21,27:844,1073:-71.1723,-18.7799,-191.909,0,-109.893,-171.319 0|0:122:68,15,39:68:2703:15,39:607,1548:-106.948,-77.367,-295.38,0,-172.472,-210.782 0|0:83:54,7,22:54:2129:7,22:282,860:-54.4311,-47.4413,-220.48,0,-151.893,-168.514 0|0:127:69,2,56:69:2725:2,56:75,2218:-161.785,-176.415,-400.027,0,-218.093,-207.377 dDocent_Contig_5448 98 . N T 294.897 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=10;CIGAR=1X;DP=10;DPB=10;DPRA=0;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=318;QR=0;RO=0;RPL=10;RPP=24.725;RPPR=0;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:25:-2.49986,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:9:0,9:0:0:9:293:-26.687,-2.70927,0 dDocent_Contig_5449 55 . A T 1196.03 . AB=0.212014;ABP=206.875;AC=4;AF=0.333333;AN=12;AO=66;CIGAR=1X;DP=432;DPB=432;DPRA=0;EPP=146.327;EPPR=797.769;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.954545;PAIREDR=0.680328;PAO=0;PQA=0;PQR=0;PRO=0;QA=2582;QR=14361;RO=366;RPL=65;RPP=137.773;RPPR=495.116;RPR=1;RUN=1;SAF=65;SAP=137.773;SAR=1;SRF=327;SRP=495.116;SRR=39;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:61:31,30:31:1211:30:1175:-87.661,0,-90.9048 0/0:82:79,3:79:3066:3:119:0,-13.5894,-264.938 0/1:63:54,9:54:2151:9:339:-11.8879,0,-174.807 0/1:63:55,8:55:2154:8:326:-10.745,0,-175.076 0/0:67:64,3:64:2517:3:122:0,-8.79652,-215.312 0/1:96:83,13:83:3262:13:501:-16.5312,0,-264.757 dDocent_Contig_5450 12 . A C 245.11 . AB=0.101538;ABP=451.209;AC=1;AF=0.0833333;AN=12;AO=112;CIGAR=1X;DP=1875;DPB=1875;DPRA=0;EPP=246.215;EPPR=3768.34;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.991926;PAO=0;PQA=0;PQR=0;PRO=0;QA=4479;QR=68662;RO=1734;RPL=0;RPP=246.215;RPPR=3768.34;RPR=112;RUN=1;SAF=112;SAP=246.215;SAR=0;SRF=1734;SRP=3768.34;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:274:256,13:256:10174:13:530:0,-33.3393,-866.987 0/0:340:306,26:306:12029:26:1055:0,-5.07794,-986.602 0/0:172:163,7:163:6445:7:261:0,-27.737,-555.947 0/1:325:278,33:278:11006:33:1331:-26.0339,0,-895.816 0/0:325:302,23:302:11964:23:899:0,-16.6181,-994.734 0/0:439:429,10:429:17044:10:403:0,-95.5223,-1496.03 dDocent_Contig_5451 33 . G A 1528.77 . AB=0.217009;ABP=240.21;AC=2;AF=0.166667;AN=12;AO=86;CIGAR=1X;DP=1341;DPB=1341;DPRA=0.682237;EPP=189.757;EPPR=2728.21;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.906977;PAIREDR=0.948207;PAO=0;PQA=0;PQR=0;PRO=0;QA=3346;QR=48097;RO=1255;RPL=0;RPP=189.757;RPPR=2728.21;RPR=86;RUN=1;SAF=86;SAP=189.757;SAR=0;SRF=1255;SRP=2728.21;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:179:176,3:176:6715:3:120:0,-42.6971,-593 0/0:259:252,7:252:9789:7:276:0,-52.7573,-855.349 0/0:304:304,0:304:11640:0:0:0,-91.5131,-1047.02 0/0:258:256,2:256:9776:2:81:0,-69.98,-871.759 0/1:158:122,36:122:4653:36:1393:-78.0842,0,-371.212 0/1:183:145,38:145:5524:38:1476:-78.015,0,-442.002 dDocent_Contig_5452 9 . C G 1452.69 . AB=0.204852;ABP=283.727;AC=1;AF=0.0833333;AN=12;AO=79;CIGAR=1X;DP=1260;DPB=1260;DPRA=1.36898;EPP=174.557;EPPR=2567.52;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2973;QR=45213;RO=1181;RPL=0;RPP=174.557;RPPR=2567.52;RPR=79;RUN=1;SAF=79;SAP=174.557;SAR=0;SRF=1181;SRP=2567.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:136:136,0:136:5192:0:0:0,-40.9401,-467.293 0/0:141:138,3:138:5268:3:103:0,-32.8367,-464.512 0/0:113:113,0:113:4346:0:0:0,-34.0164,-391.199 0/0:149:149,0:149:5700:0:0:0,-44.8535,-512.969 0/0:350:350,0:350:13425:0:0:0,-105.36,-1207.65 0/1:371:295,76:295:11282:76:2870:-146.792,0,-903.26 dDocent_Contig_5453 15 . C T 2469.58 . AB=0.203333;ABP=461.683;AC=3;AF=0.25;AN=12;AO=157;CIGAR=1X;DP=1286;DPB=1286;DPRA=0;EPP=343.931;EPPR=2448.09;GTI=0;LEN=1;MEANALT=1.5;MQM=59.5796;MQMR=59.7202;NS=6;NUMALT=1;ODDS=0;PAIRED=0.993631;PAIREDR=0.978686;PAO=0;PQA=0;PQR=0;PRO=0;QA=6176;QR=44492;RO=1126;RPL=0;RPP=343.931;RPPR=2448.09;RPR=157;RUN=1;SAF=157;SAP=343.931;SAR=0;SRF=1126;SRP=2448.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:209:194,15:194:7687:15:574:0,-10.9239,-632.862 0/0:290:275,15:275:10867:15:603:0,-32.6895,-922.744 0/0:187:181,5:181:7173:5:190:0,-38.9157,-627.682 0/1:217:195,22:195:7676:22:874:-13.6505,0,-624.132 0/1:204:152,50:152:5983:50:1983:-116.519,0,-477.244 0/1:179:129,50:129:5106:50:1952:-122.011,0,-405.362 dDocent_Contig_5454 24 . A G 1071.22 . AB=0.160377;ABP=427.799;AC=2;AF=0.166667;AN=12;AO=71;CIGAR=1X;DP=1095;DPB=1095;DPRA=1.27651;EPP=157.185;EPPR=2217.91;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.984314;PAO=0;PQA=0;PQR=0;PRO=0;QA=2754;QR=39978;RO=1020;RPL=0;RPP=157.185;RPPR=2217.91;RPR=71;RUN=1;SAF=71;SAP=157.185;SAR=0;SRF=1020;SRP=2217.91;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:170:170,0:170:6657:0:0:0,-51.1751,-598.893 0/0:190:187,3:187:7353:3:118:0,-46.193,-650.457 0/0:110:110,0:110:4377:0:0:0,-33.1133,-393.897 0/0:201:199,0:199:7797:0:0:0,-59.905,-700.955 0/1:179:155,24:155:6044:24:923:-29.4905,0,-489.91 0/1:245:199,44:199:7750:44:1713:-80.8538,0,-623.619 dDocent_Contig_5455 107 . N G 228.91 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0.571429;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=238;QR=0;RO=0;RPL=0;RPP=18.2106;RPPR=0;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 1/1:4:0,4:0:0:4:138:-12.7604,-1.20412,0 1/1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5456 14 . T C 15456.4 . AB=0.362356;ABP=260.056;AC=6;AF=0.5;AN=12;AO=566;CIGAR=1X;DP=1562;DPB=1562;DPRA=0;EPP=1232.06;EPPR=2161.45;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.9947;PAIREDR=0.990946;PAO=0;PQA=0;PQR=0;PRO=0;QA=22521;QR=33990;RO=994;RPL=0;RPP=1232.06;RPPR=2161.45;RPR=566;RUN=1;SAF=566;SAP=1232.06;SAR=0;SRF=994;SRP=2161.45;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:235:165,70:165:5642:70:2776:-179.215,0,-437.146 0/1:271:183,87:183:6210:87:3438:-228.11,0,-477.614 0/1:152:94,58:94:3204:58:2249:-156.823,0,-242.806 0/1:311:202,108:202:6956:108:4330:-295.918,0,-532.361 0/1:251:157,94:157:5284:94:3750:-261.954,0,-400.135 0/1:342:193,149:193:6694:149:5978:-434.839,0,-499.561 dDocent_Contig_5457 208 . A G 28147.5 . AB=0.456971;ABP=21.6977;AC=8;AF=0.666667;AN=12;AO=1096;CIGAR=1X;DP=1750;DPB=1750;DPRA=0;EPP=2382.94;EPPR=1420.98;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.998175;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=36075;QR=24071;RO=653;RPL=1096;RPP=2382.94;RPPR=1420.98;RPR=0;RUN=1;SAF=0;SAP=2382.94;SAR=1096;SRF=0;SRP=1420.98;SRR=653;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:226:100,126:100:3732:126:4111:-302.183,0,-267.973 0/1:330:180,150:180:6654:150:4937:-345.193,0,-499.457 0/1:221:152,68:152:5665:68:2274:-138.292,0,-443.22 0/1:385:198,187:198:7184:187:6154:-438.13,0,-530.586 1/1:279:17,262:17:609:262:8549:-714.398,-28.8608,0 1/1:309:6,303:6:227:303:10050:-883.776,-72.226,0 dDocent_Contig_5458 21 . G A 3799.94 . AB=0.331839;ABP=112.558;AC=6;AF=0.5;AN=12;AO=148;CIGAR=1X;DP=446;DPB=446;DPRA=0;EPP=324.388;EPPR=650.109;GTI=0;LEN=1;MEANALT=1;MQM=59.1419;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.993243;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5858;QR=11849;RO=298;RPL=0;RPP=324.388;RPPR=650.109;RPR=148;RUN=1;SAF=148;SAP=324.388;SAR=0;SRF=298;SRP=650.109;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:86:62,24:62:2481:24:929:-58.0182,0,-197.546 0/1:80:48,32:48:1938:32:1273:-90.7576,0,-150.532 0/1:56:38,18:38:1511:18:708:-47.1878,0,-119.372 0/1:84:55,29:55:2180:29:1166:-76.4397,0,-171.093 0/1:80:51,29:51:2012:29:1164:-80.9353,0,-157.192 0/1:60:44,16:44:1727:16:618:-37.8771,0,-137.594 dDocent_Contig_5459 20 . G C 591.97 . AB=0.184524;ABP=148.24;AC=2;AF=0.166667;AN=12;AO=31;CIGAR=1X;DP=435;DPB=435;DPRA=1.25843;EPP=70.3259;EPPR=880.285;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.967742;PAIREDR=0.967822;PAO=0;PQA=0;PQR=0;PRO=0;QA=1248;QR=15916;RO=404;RPL=0;RPP=70.3259;RPPR=880.285;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=404;SRP=880.285;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:54,0:54:2131:0:0:0,-16.2556,-191.977 0/0:88:88,0:88:3438:0:0:0,-26.4906,-309.48 0/0:51:51,0:51:2024:0:0:0,-15.3525,-182.353 0/0:74:74,0:74:2905:0:0:0,-22.2762,-261.56 0/1:72:55,17:55:2139:17:683:-40.1253,0,-171.025 0/1:96:82,14:82:3279:14:565:-22.2936,0,-266.273 dDocent_Contig_5460 8 . G A 3646.4 . AB=0.312883;ABP=151.723;AC=4;AF=0.333333;AN=12;AO=157;CIGAR=1X;DP=671;DPB=671;DPRA=0;EPP=343.931;EPPR=1119.15;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.998054;PAO=0;PQA=0;PQR=0;PRO=0;QA=5904;QR=19730;RO=514;RPL=0;RPP=343.931;RPPR=1119.15;RPR=157;RUN=1;SAF=157;SAP=343.931;SAR=0;SRF=514;SRP=1119.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:64:61,3:61:2351:3:110:0,-9.00631,-201.542 0/0:118:117,1:117:4465:1:39:0,-31.625,-398.011 0/1:157:142,15:142:5466:15:564:-3.83529,0,-444.655 0/1:105:90,15:90:3434:15:557:-18.8558,0,-277.583 0/1:101:44,57:44:1700:57:2163:-164.497,0,-122.854 0/1:126:60,66:60:2314:66:2471:-184.672,0,-170.542 dDocent_Contig_5461 54 . A G 2966.06 . AB=0.189763;ABP=672.64;AC=2;AF=0.166667;AN=12;AO=154;CIGAR=1X;DP=2192;DPB=2192;DPRA=0.919689;EPP=337.417;EPPR=4419.79;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6080;QR=79985;RO=2034;RPL=154;RPP=337.417;RPPR=4419.79;RPR=0;RUN=1;SAF=154;SAP=337.417;SAR=0;SRF=2034;SRP=4419.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:295:293,1:293:11456:1:38:0,-85.1001,-1026.53 0/0:324:322,1:322:12633:1:34:0,-94.2084,-1132.72 0/0:414:414,0:414:16300:0:0:0,-124.626,-1465.83 0/0:358:358,0:358:14079:0:0:0,-107.769,-1266.13 0/1:434:362,71:362:14336:71:2800:-121.59,0,-1158.7 0/1:367:285,81:285:11181:81:3208:-178.238,0,-895.044 dDocent_Contig_5462 45 . C T 599.604 . AB=0.0953809;ABP=2373.52;AC=4;AF=0.333333;AN=12;AO=201;CIGAR=1X;DP=2266;DPB=2266;DPRA=0;EPP=439.476;EPPR=4487.1;GTI=0;LEN=1;MEANALT=1;MQM=59.7214;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.656716;PAIREDR=0.99661;PAO=0;PQA=0;PQR=0;PRO=0;QA=7969;QR=82511;RO=2065;RPL=0;RPP=439.476;RPPR=4487.1;RPR=201;RUN=1;SAF=201;SAP=439.476;SAR=0;SRF=2065;SRP=4487.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:319:289,30:289:11586:30:1197:-11.4257,0,-945.881 0/1:514:465,49:465:18502:49:1943:-20.0572,0,-1508.92 0/0:221:203,18:203:8130:18:715:0,-1.85083,-666.55 0/0:378:354,24:354:14142:24:933:0,-29.5227,-1187.41 0/1:378:339,39:339:13569:39:1568:-27.5679,0,-1106.39 0/1:456:415,41:415:16582:41:1613:-8.13135,0,-1353.74 dDocent_Contig_5463 13 . T G 1645.36 . AB=0.214485;ABP=257.206;AC=4;AF=0.333333;AN=12;AO=80;CIGAR=1X;DP=495;DPB=495;DPRA=1.15616;EPP=176.728;EPPR=904.171;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3217;QR=16665;RO=415;RPL=0;RPP=176.728;RPPR=904.171;RPR=80;RUN=1;SAF=80;SAP=176.728;SAR=0;SRF=415;SRP=904.171;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:72:60,12:60:2375:12:479:-21.786,0,-192.218 0/1:117:99,18:99:3956:18:726:-30.4436,0,-320.791 0/1:59:48,11:48:1950:11:441:-22.2826,0,-157.925 0/1:111:75,36:75:3003:36:1449:-97.246,0,-236.925 0/0:73:73,0:73:2947:0:0:0,-21.9752,-265.314 0/0:63:60,3:60:2434:3:122:0,-7.5924,-207.822 dDocent_Contig_5465 57 . G A 468.829 . AB=0.110476;ABP=694.908;AC=1;AF=0.0833333;AN=12;AO=145;CIGAR=1X;DP=2743;DPB=2743;DPRA=1.13155;EPP=317.874;EPPR=5640.15;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998844;PAO=0;PQA=0;PQR=0;PRO=0;QA=5684;QR=102280;RO=2596;RPL=145;RPP=317.874;RPPR=5640.15;RPR=0;RUN=1;SAF=145;SAP=317.874;SAR=0;SRF=2596;SRP=5640.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:477:466,11:466:18359:11:425:0,-104.994,-1612.31 0/0:628:591,36:591:23269:36:1420:0,-61.0973,-1964.25 0/0:455:417,38:417:16439:38:1509:0,-0.912383,-1342.22 0/1:525:467,58:467:18366:58:2292:-48.4057,0,-1493.49 0/0:246:244,2:244:9568:2:38:0,-70.4437,-856.966 0/0:412:411,0:411:16279:0:0:0,-123.723,-1463.46 dDocent_Contig_5466 98 . N C 184.487 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=182;QR=0;RO=0;RPL=7;RPP=18.2106;RPPR=0;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:56:-5.31947,-0.60206,0 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 1/1:1:0,1:0:0:1:20:-1.99996,-0.30103,0 1/1:2:0,2:0:0:2:50:-4.74955,-0.60206,0 1/1:1:0,1:0:0:1:23:-2.29991,-0.30103,0 dDocent_Contig_5467 35 . T A 157.499 . AB=0.146067;ABP=99.8482;AC=3;AF=0.25;AN=12;AO=14;CIGAR=1X;DP=160;DPB=160;DPRA=1.5;EPP=33.4109;EPPR=320.045;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=559;QR=5776;RO=146;RPL=0;RPP=33.4109;RPPR=320.045;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=146;SRP=320.045;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:30,1:30:1174:1:41:0,-5.23736,-101.847 0/1:40:34,6:34:1365:6:241:-10.0251,0,-111.068 0/1:22:19,3:19:736:3:123:-4.84213,0,-59.925 0/1:27:23,4:23:918:4:154:-6.10437,0,-74.7979 0/0:21:21,0:21:824:0:0:0,-6.32163,-74.4698 0/0:19:19,0:19:759:0:0:0,-5.71957,-68.6332 dDocent_Contig_5468 19 . G C 2163.89 . AB=0.12153;ABP=2019.8;AC=2;AF=0.166667;AN=12;AO=267;CIGAR=1X;DP=5359;DPB=5359;DPRA=0.765586;EPP=582.793;EPPR=11049.3;GTI=0;LEN=1;MEANALT=1.8;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.999017;PAO=0;PQA=0;PQR=0;PRO=0;QA=10676;QR=202335;RO=5087;RPL=0;RPP=582.793;RPPR=11049.3;RPR=267;RUN=1;SAF=267;SAP=582.793;SAR=0;SRF=5087;SRP=11049.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:655:549,105:549:21900:105:4162:-177.272,0,-1771.83 0/0:864:822,41:822:32750:41:1653:0,-110.906,-2795.53 0/0:678:654,24:654:25844:24:957:0,-117.667,-2237.24 0/1:966:873,92:873:34926:92:3702:-42.3392,0,-2849.23 0/0:1110:1109,0:1109:44059:0:0:0,-333.842,-3960.79 0/0:1086:1080,5:1080:42856:5:202:0,-308.456,-3834.46 dDocent_Contig_5469 19 . A C 195.675 . AB=0.208333;ABP=38.4777;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=299;DPB=299;DPRA=1.41129;EPP=31.2394;EPPR=624.051;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.937063;PAO=0;PQA=0;PQR=0;PRO=0;QA=509;QR=11295;RO=286;RPL=0;RPP=31.2394;RPPR=624.051;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=286;SRP=624.051;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:37,0:37:1456:0:0:0,-11.1381,-131.287 0/0:66:65,1:65:2578:1:38:0,-16.0707,-228.359 0/1:48:38,10:38:1469:10:391:-21.0904,0,-118 0/0:61:59,2:59:2362:2:80:0,-10.7713,-205.14 0/0:38:38,0:38:1535:0:0:0,-11.4391,-138.388 0/0:49:49,0:49:1895:0:0:0,-14.7505,-170.762 dDocent_Contig_5470 12 . C A 6652.34 . AB=0.536585;ABP=7.77695;AC=6;AF=0.5;AN=12;AO=220;CIGAR=1X2M;DP=410;DPB=410;DPRA=0;EPP=480.734;EPPR=365.646;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=0.959091;PAIREDR=0.928144;PAO=0;PQA=0;PQR=0;PRO=0;QA=8812;QR=6649;RO=167;RPL=0;RPP=480.734;RPPR=365.646;RPR=220;RUN=1;SAF=220;SAP=480.734;SAR=0;SRF=167;SRP=365.646;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:57:16,5,36:16:639:5,36:201,1443:-114.066,-102.318,-153.441,0,-36.0617,-41.7895 0|1:84:53,5,26:53:2107:5,26:198,1034:-69.1776,-68.8361,-240.797,0,-157.171,-165.64 0|1:39:21,3,15:21:835:3,15:121,610:-43.9973,-40.3453,-108.183,0,-58.7665,-64.226 0|1:65:24,10,31:24:959:10,31:399,1242:-95.098,-69.4634,-145.442,0,-46.1301,-69.6577 0|1:56:14,0,42:14:556:0,42:0,1668:-133.478,-137.693,-183.465,0,-46.1692,-33.526 0|1:109:39,0,70:39:1553:0,70:0,2815:-220.639,-232.379,-360.252,0,-128.273,-107.201 dDocent_Contig_5471 21 . C A 2889.49 . AB=0.0627306;ABP=1353.23;AC=4;AF=0.333333;AN=12;AO=51;CIGAR=2M2D1X1M4X1M;DP=1123;DPB=776.636;DPRA=0;EPP=113.755;EPPR=825.998;GTI=0;LEN=1;MEANALT=4.5;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2018;QR=14823;RO=379;RPL=0;RPP=113.755;RPPR=825.998;RPR=51;RUN=1;SAF=51;SAP=113.755;SAR=0;SRF=379;SRP=825.998;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:176:62,0,0,20,1,0:62:2413:0,0,20,1,0:0,0,792,41,0:-46.5215,-65.1853,-263.481,-65.1853,-263.481,-263.481,0,-198.297,-198.297,-192.276,-61.801,-260.097,-260.097,-194.912,-259.796,-65.1853,-263.481,-263.481,-198.297,-260.097,-263.481 0|1:234:83,0,0,17,0,0:83:3251:0,0,17,0,0:0,0,669,0,0:-30.0485,-55.034,-322.347,-55.034,-322.347,-322.347,0,-267.314,-267.314,-262.196,-55.034,-322.347,-322.347,-267.314,-322.347,-55.034,-322.347,-322.347,-267.314,-322.347,-322.347 0|0:166:74,0,0,0,10,2:74:2892:0,0,0,10,2:0,0,0,387,81:-9.51073,-31.7869,-269.526,-31.7869,-269.526,-269.526,-31.7869,-269.526,-269.526,-269.526,0,-237.738,-237.738,-237.738,-234.728,-25.1075,-262.846,-262.846,-262.846,-231.059,-262.244 0|1:292:97,0,0,13,7,7:97:3824:0,0,13,7,7:0,0,516,270,280:-13.2792,-42.4791,-357.093,-42.4791,-357.093,-357.093,0,-314.614,-314.614,-310.701,-20.3088,-334.923,-334.923,-292.444,-332.815,-19.4134,-334.027,-334.027,-291.549,-311.857,-331.92 0|0:144:27,57,0,0,0,0:27:1036:57,0,0,0,0:2234,0,0,0,0:-175.58,0,-67.8667,-183.708,-85.0254,-268.732,-183.708,-85.0254,-268.732,-268.732,-183.708,-85.0254,-268.732,-268.732,-268.732,-183.708,-85.0254,-268.732,-268.732,-268.732,-268.732 0|1:111:36,8,11,1,0,4:36:1407:8,11,1,0,4:323,438,41,0,156:-25.2314,-9.4389,-122.703,0,-89.0435,-112.361,-32.6841,-121.727,-112.288,-148.055,-36.0685,-125.111,-115.673,-148.356,-151.74,-23.2464,-112.289,-102.85,-135.534,-138.918,-137.714 dDocent_Contig_5472 54 . T C 212.234 . AB=0.106109;ABP=422.118;AC=1;AF=0.0833333;AN=12;AO=46;CIGAR=1X;DP=1564;DPB=1564;DPRA=1.55051;EPP=102.898;EPPR=3297.13;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.996045;PAO=0;PQA=0;PQR=0;PRO=0;QA=1804;QR=59275;RO=1517;RPL=46;RPP=102.898;RPPR=3297.13;RPR=0;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=1517;SRP=3297.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:214:214,0:214:8330:0:0:0,-64.4204,-749.322 0/0:239:239,0:239:9260:0:0:0,-71.9462,-832.94 0/0:141:141,0:141:5586:0:0:0,-42.4452,-502.596 0/0:287:286,0:286:11152:0:0:0,-86.0946,-1002.67 0/1:311:278,33:278:10833:33:1290:-22.7463,0,-880.735 0/0:372:359,13:359:14114:13:514:0,-65.3789,-1222.73 dDocent_Contig_5473 1 . N G 74.0456 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=78;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:78:-7.40347,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5474 19 . G A 158.785 . AB=0.141304;ABP=105.825;AC=1;AF=0.0833333;AN=12;AO=35;CIGAR=1X;DP=663;DPB=663;DPRA=1.85106;EPP=79.0118;EPPR=1366.69;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.998408;PAO=0;PQA=0;PQR=0;PRO=0;QA=1358;QR=24672;RO=628;RPL=0;RPP=79.0118;RPPR=1366.69;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=628;SRP=1366.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:92:79,13:79:3151:13:494:-17.1004,0,-255.974 0/0:146:138,8:138:5416:8:311:0,-15.6037,-458.958 0/0:63:63,0:63:2501:0:0:0,-18.9649,-225.236 0/0:153:142,11:142:5570:11:440:0,-6.10199,-461.195 0/0:78:78,0:78:3027:0:0:0,-23.4803,-272.53 0/0:131:128,3:128:5007:3:113:0,-28.8989,-440 dDocent_Contig_5475 19 . C A 1042.03 . AB=0.154762;ABP=437.822;AC=1;AF=0.0833333;AN=12;AO=76;CIGAR=1X;DP=2639;DPB=2639;DPRA=0.997161;EPP=168.042;EPPR=5568.49;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993367;PAO=0;PQA=0;PQR=0;PRO=0;QA=3022;QR=101425;RO=2563;RPL=0;RPP=168.042;RPPR=5568.49;RPR=76;RUN=1;SAF=76;SAP=168.042;SAR=0;SRF=2563;SRP=5568.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:516:516,0:516:20398:0:0:0,-155.331,-1834.18 0/0:515:515,0:515:20346:0:0:0,-155.03,-1829.52 0/0:227:227,0:227:8883:0:0:0,-68.3338,-798.988 0/0:503:503,0:503:19902:0:0:0,-151.418,-1789.57 0/1:420:355,65:355:14151:65:2578:-105.726,0,-1146.1 0/0:458:447,11:447:17745:11:444:0,-97.5561,-1555.31 dDocent_Contig_5476 191 . G T 637.659 . AB=0.227941;ABP=90.444;AC=3;AF=0.25;AN=12;AO=32;CIGAR=1X;DP=245;DPB=245;DPRA=1.09091;EPP=72.4974;EPPR=465.534;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.875;PAIREDR=0.849765;PAO=0;PQA=0;PQR=0;PRO=0;QA=1248;QR=8588;RO=213;RPL=32;RPP=72.4974;RPPR=465.534;RPR=0;RUN=1;SAF=0;SAP=72.4974;SAR=32;SRF=0;SRP=465.534;SRR=213;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:48:28,20:28:1134:20:791:-57.0499,0,-87.8889 0/0:35:35,0:35:1426:0:0:0,-10.536,-128.584 0/1:46:41,5:41:1638:5:172:-1.95663,0,-133.793 0/0:32:31,1:31:1245:1:39:0,-5.7364,-108.422 0/0:42:42,0:42:1689:0:0:0,-12.6433,-152.229 0/1:42:36,6:36:1456:6:246:-9.87686,0,-118.636 dDocent_Contig_5477 17 . A T 1818.26 . AB=0.141268;ABP=1007.89;AC=2;AF=0.166667;AN=12;AO=185;CIGAR=1X;DP=2652;DPB=2652;DPRA=0;EPP=404.733;EPPR=5353.52;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.999188;PAO=0;PQA=0;PQR=0;PRO=0;QA=7393;QR=98235;RO=2464;RPL=0;RPP=404.733;RPPR=5353.52;RPR=185;RUN=1;SAF=185;SAP=404.733;SAR=0;SRF=2464;SRP=5353.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:349:328,21:328:13041:21:834:0,-29.6918,-1097.39 0/0:457:450,5:450:17932:5:205:0,-118.433,-1593.65 0/0:493:462,30:462:18469:30:1214:0,-38.9882,-1551.16 0/0:454:452,2:452:17955:2:80:0,-129.076,-1606.93 0/1:458:382,76:382:15290:76:3002:-132.4,0,-1237.02 0/1:441:390,51:390:15548:51:2058:-52.648,0,-1265.37 dDocent_Contig_5478 88 . T C 245.283 . AB=0.189873;ABP=69.0066;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=1X;DP=564;DPB=564;DPRA=1.09655;EPP=57.2971;EPPR=1173.43;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.675325;PAO=0;PQA=0;PQR=0;PRO=0;QA=929;QR=19795;RO=539;RPL=15;RPP=5.18177;RPPR=58.1593;RPR=10;RUN=1;SAF=15;SAP=5.18177;SAR=10;SRF=328;SRP=58.1593;SRR=211;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:89:85,4:85:3176:4:151:0,-12.8357,-272.03 0/1:79:64,15:64:2308:15:550:-26.0512,0,-184.157 0/0:60:58,2:58:2102:2:76:0,-10.8483,-182.193 0/0:135:133,2:133:4903:2:76:0,-33.4255,-434.098 0/0:87:87,0:87:3216:0:0:0,-26.1896,-289.594 0/0:114:112,2:112:4090:2:76:0,-27.1039,-361.006 dDocent_Contig_5479 98 . N T 93.7561 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=93;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:36:-3.41967,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:50:-4.74945,-0.60206,0 dDocent_Contig_5480 16 . C T 39.4457 . AB=0.100719;ABP=195.49;AC=1;AF=0.0833333;AN=12;AO=35;CIGAR=1X;DP=773;DPB=773;DPRA=0.971212;EPP=79.0118;EPPR=1605.56;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.885714;PAIREDR=0.925474;PAO=0;PQA=0;PQR=0;PRO=0;QA=1346;QR=29603;RO=738;RPL=0;RPP=79.0118;RPPR=1605.56;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=738;SRP=1605.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:86:83,3:83:3320:3:121:0,-14.6084,-287.565 0/0:155:147,8:147:5910:8:309:0,-18.4884,-503.496 0/0:113:108,5:108:4339:5:197:0,-15.9102,-372.329 0/0:132:132,0:132:5261:0:0:0,-39.736,-473.328 0/1:139:125,14:125:5050:14:522:-5.4674,0,-412.506 0/0:148:143,5:143:5723:5:197:0,-26.4472,-496.764 dDocent_Contig_5481 50 . C T 1794.81 . AB=0.0666667;ABP=51.9408;AC=0;AF=0;AN=12;AO=2;CIGAR=2X;DP=378;DPB=378;DPRA=0;EPP=7.35324;EPPR=32.6274;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.845361;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=11483;RO=291;RPL=0;RPP=7.35324;RPPR=28.9859;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=289;SRP=617.656;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:48:37,0,10:37:1457:0,10:0,386:-20.8248,-31.963,-151.846,0,-120.152,-117.141 0|0:72:65,0,7:65:2548:0,7:0,284:-4.25983,-23.8268,-233.326,0,-209.903,-207.796 0|0:30:25,2,3:25:997:2,3:82,119:-2.262,-3.01431,-84.5148,0,-75.3214,-81.1873 0|0:103:79,0,24:79:3113:0,24:0,946:-54.4278,-78.2092,-334.308,0,-256.493,-249.268 0|0:55:27,0,28:27:1065:0,28:0,1140:-86.3211,-94.4489,-182.064,0,-88.0151,-79.5863 0|0:70:58,0,12:58:2303:0,12:0,481:-22.5687,-40.0285,-229.605,0,-189.976,-186.364 dDocent_Contig_5482 10 . A G 18925.2 . AB=0.360965;ABP=323.035;AC=5;AF=0.416667;AN=12;AO=688;CIGAR=1X;DP=2526;DPB=2526;DPRA=0.614839;EPP=1496.98;EPPR=3992.01;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=27517;QR=73223;RO=1837;RPL=0;RPP=1496.98;RPPR=3992.01;RPR=688;RUN=1;SAF=688;SAP=1496.98;SAR=0;SRF=1837;SRP=3992.01;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:285:124,160:124:4953:160:6436:-493.06,0,-359.75 0/1:368:168,200:168:6649:200:7939:-603.304,0,-487.357 0/1:168:114,54:114:4526:54:2163:-144.269,0,-356.696 0/1:331:214,117:214:8546:117:4724:-325.406,0,-669.001 0/0:620:620,0:620:24752:0:0:0,-186.639,-2225.52 0/1:754:597,157:597:23797:157:6255:-335.7,0,-1912.67 dDocent_Contig_5483 21 . G A 115.138 . AB=0.184211;ABP=35.9253;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=267;DPB=267;DPRA=0.829694;EPP=18.2106;EPPR=567.593;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.857143;PAIREDR=0.823077;PAO=0;PQA=0;PQR=0;PRO=0;QA=268;QR=10223;RO=260;RPL=0;RPP=18.2106;RPPR=567.593;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=260;SRP=567.593;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:37,0:37:1456:0:0:0,-11.1381,-131.296 0/0:58:58,0:58:2234:0:0:0,-17.4597,-201.239 0/1:38:31,7:31:1228:7:268:-13.0366,0,-99.3586 0/0:25:25,0:25:990:0:0:0,-7.52575,-89.4009 0/0:53:53,0:53:2112:0:0:0,-15.9546,-190.266 0/0:56:56,0:56:2203:0:0:0,-16.8577,-198.444 dDocent_Contig_5484 38 . A G 1492.54 . AB=0.235099;ABP=187.082;AC=5;AF=0.416667;AN=12;AO=77;CIGAR=1X;DP=378;DPB=378;DPRA=0;EPP=170.214;EPPR=656.623;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996678;PAO=0;PQA=0;PQR=0;PRO=0;QA=2980;QR=11567;RO=301;RPL=0;RPP=170.214;RPPR=656.623;RPR=77;RUN=1;SAF=77;SAP=170.214;SAR=0;SRF=301;SRP=656.623;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:22,12:22:837:12:458:-31.3255,0,-65.4124 0/0:76:70,6:70:2675:6:228:0,-1.99506,-220.043 0/1:27:23,4:23:895:4:157:-6.38069,0,-72.7349 0/1:69:58,11:58:2236:11:427:-18.0118,0,-180.675 0/1:77:59,18:59:2286:18:702:-40.3326,0,-182.761 0/1:95:69,26:69:2638:26:1008:-62.425,0,-209 dDocent_Contig_5485 36 . G A 3565.09 . AB=0.0544872;ABP=540.895;AC=0;AF=0;AN=12;AO=17;CIGAR=1M10I4M1X;DP=769;DPB=1085.67;DPRA=0.507317;EPP=39.9253;EPPR=1251.61;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.941176;PAIREDR=0.993043;PAO=0;PQA=0;PQR=0;PRO=0;QA=584;QR=22580;RO=575;RPL=0;RPP=39.9253;RPPR=1251.61;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=575;SRP=1251.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:91:41,2,47:41:1612:2,47:53,1634:-120.605,-128.783,-260.796,0,-128.577,-118.59 0|0:97:62,0,32:62:2445:0,32:0,1130:-73.4963,-92.1602,-293.355,0,-201.348,-191.715 0|0:99:45,5,48:45:1774:5,48:165,1704:-125.334,-125.544,-270.013,0,-132.701,-131.583 0|0:122:88,10,24:88:3428:10,24:366,861:-43.7295,-40.3064,-319.05,0,-251.842,-274.526 0|0:155:140,0,15:140:5479:0,15:0,543:-2.54649,-44.6907,-495.185,0,-450.859,-446.343 0|0:205:199,0,5:199:7842:0,5:0,179:0,-59.905,-705.103,-45.2098,-690.507,-689.002 dDocent_Contig_5486 13 . G A 582.072 . AB=0.555556;ABP=3.9754;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=116;DPB=116;DPRA=0.9;EPP=46.4397;EPPR=209.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=795;QR=3825;RO=95;RPL=0;RPP=46.4397;RPPR=209.3;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=95;SRP=209.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:407:0:0:0,-3.0103,-36.9906 0/1:15:6,9:6:245:9:363:-28.5183,0,-17.914 0/1:21:10,11:10:404:11:432:-32.9107,0,-30.3988 0/0:19:18,0:18:723:0:0:0,-5.41854,-64.9871 0/0:32:32,0:32:1285:0:0:0,-9.63296,-115.914 0/0:19:19,0:19:761:0:0:0,-5.71957,-68.8104 dDocent_Contig_5487 8 . G T 625.845 . AB=0.2;ABP=139.813;AC=4;AF=0.333333;AN=12;AO=36;CIGAR=1X;DP=266;DPB=266;DPRA=0.843137;EPP=81.1833;EPPR=498.106;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.767544;PAO=0;PQA=0;PQR=0;PRO=0;QA=1384;QR=8742;RO=228;RPL=0;RPP=81.1833;RPPR=498.106;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=228;SRP=498.106;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:30,5:30:1161:5:195:-7.38815,0,-94.2531 0/0:40:38,1:38:1451:1:39:0,-8.23326,-126.972 0/1:35:31,4:31:1189:4:149:-3.23628,0,-96.771 0/0:51:50,0:50:1940:0:0:0,-15.0515,-174.449 0/1:27:18,9:18:684:9:347:-23.4615,0,-53.7652 0/1:78:61,17:61:2317:17:654:-35.7163,0,-185.267 dDocent_Contig_5488 19 . T C 580.575 . AB=0.182796;ABP=165.567;AC=5;AF=0.416667;AN=12;AO=35;CIGAR=1X;DP=243;DPB=243;DPRA=0;EPP=79.0118;EPPR=454.677;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.657143;PAIREDR=0.596154;PAO=0;PQA=0;PQR=0;PRO=0;QA=1385;QR=8328;RO=208;RPL=0;RPP=79.0118;RPPR=454.677;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=208;SRP=454.677;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:27,10:27:1077:10:383:-23.6826,0,-86.0787 0/1:42:34,8:34:1357:8:308:-15.4337,0,-109.736 0/1:20:18,2:18:723:2:81:-1.66513,0,-59.3749 0/1:52:43,9:43:1736:9:368:-17.8318,0,-140.801 0/1:35:30,5:30:1194:5:205:-8.29896,0,-97.1981 0/0:57:56,1:56:2241:1:40:0,-13.163,-197.862 dDocent_Contig_5489 14 . T C 7968.55 . AB=0.308383;ABP=322.568;AC=6;AF=0.5;AN=12;AO=309;CIGAR=1X;DP=1002;DPB=1002;DPRA=0;EPP=673.995;EPPR=1496.98;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.996764;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=12309;QR=27441;RO=688;RPL=0;RPP=673.995;RPPR=1496.98;RPR=309;RUN=1;SAF=309;SAP=673.995;SAR=0;SRF=688;SRP=1496.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:163:132,31:132:5271:31:1246:-63.3414,0,-425.176 0/1:194:165,29:165:6602:29:1162:-46.4622,0,-535.492 0/1:122:93,28:93:3729:28:1128:-65.0358,0,-298.849 0/1:296:198,94:198:7893:94:3696:-244.367,0,-621.659 0/1:53:36,17:36:1383:17:679:-45.4852,0,-108.776 0/1:174:64,110:64:2563:110:4398:-343.385,0,-178.424 dDocent_Contig_5490 52 . G A 498.173 . AB=0.187919;ABP=129.058;AC=2;AF=0.166667;AN=12;AO=37;CIGAR=1X;DP=447;DPB=447;DPRA=1.23256;EPP=83.3548;EPPR=891.143;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.918919;PAIREDR=0.93643;PAO=0;PQA=0;PQR=0;PRO=0;QA=1433;QR=16167;RO=409;RPL=37;RPP=83.3548;RPPR=891.143;RPR=0;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=409;SRP=891.143;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:62:50,11:50:1968:11:435:-21.0352,0,-158.858 0/1:87:70,17:70:2774:17:643:-32.004,0,-223.581 0/0:79:74,5:74:2907:5:202:0,-5.2195,-243.169 0/0:90:86,4:86:3429:4:153:0,-12.9548,-294.522 0/0:44:44,0:44:1755:0:0:0,-13.2453,-158.169 0/0:85:85,0:85:3334:0:0:0,-25.5875,-300.119 dDocent_Contig_5491 23 . A T 2801.65 . AB=0.153444;ABP=1199.54;AC=3;AF=0.25;AN=12;AO=199;CIGAR=1X;DP=1940;DPB=1940;DPRA=1.94365;EPP=435.133;EPPR=3783.54;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.944724;PAIREDR=0.93452;PAO=0;PQA=0;PQR=0;PRO=0;QA=7877;QR=68743;RO=1741;RPL=0;RPP=435.133;RPPR=3783.54;RPR=199;RUN=1;SAF=199;SAP=435.133;SAR=0;SRF=1741;SRP=3783.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:284:263,21:263:10327:21:793:0,-13.8211,-857.154 0/1:429:375,54:375:14887:54:2149:-64.4541,0,-1209.59 0/1:296:227,69:227:8954:69:2755:-158.957,0,-716.244 0/1:422:369,53:369:14598:53:2098:-61.9757,0,-1185.74 0/0:181:181,0:181:7135:0:0:0,-54.4864,-641.84 0/0:328:326,2:326:12842:2:82:0,-90.9582,-1147.13 dDocent_Contig_5492 98 . N A 210.514 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=214;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:100:-9.24762,-1.20412,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:3:0,3:0:0:3:44:-4.10646,-0.90309,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_5493 83 . T A 558.809 . AB=0.153846;ABP=341.259;AC=1;AF=0.0833333;AN=12;AO=62;CIGAR=1X;DP=1470;DPB=1470;DPRA=1.15113;EPP=137.642;EPPR=3030.04;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=59.9225;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996413;PAO=0;PQA=0;PQR=0;PRO=0;QA=2135;QR=47873;RO=1394;RPL=62;RPP=137.642;RPPR=3030.04;RPR=0;RUN=1;SAF=62;SAP=137.642;SAR=0;SRF=1394;SRP=3030.04;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:196:193,0:193:6580:0:0:0,-58.0988,-592.064 0/0:283:280,0:280:9564:0:0:0,-84.2884,-855.398 0/0:182:179,0:179:6183:0:0:0,-53.8844,-556.518 0/0:272:270,0:270:9332:0:0:0,-81.2781,-839.822 0/0:212:199,12:199:6816:12:419:0,-25.8042,-575.517 0/1:325:273,50:273:9398:50:1716:-57.4038,0,-748.538 dDocent_Contig_5494 1 . N G 121.769 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 dDocent_Contig_5495 30 . T A 176.315 . AB=0.164179;ABP=68.6406;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=2X;DP=377;DPB=377;DPRA=0.875622;EPP=37.7539;EPPR=786.912;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.625;PAIREDR=0.747922;PAO=0;PQA=0;PQR=0;PRO=0;QA=633;QR=14127;RO=361;RPL=0;RPP=37.7539;RPPR=786.912;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=361;SRP=786.912;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:78:78,0:78:3076:0:0:0,-23.4803,-276.951 0|0:65:63,2:63:2448:2:79:0,-12.0693,-212.992 0|0:44:41,3:41:1617:3:121:0,-1.96512,-134.497 0|1:67:56,11:56:2196:11:433:-19.1544,0,-177.668 0|0:43:43,0:43:1677:0:0:0,-12.9443,-151.164 0|0:80:80,0:80:3113:0:0:0,-24.0824,-280.291 dDocent_Contig_5496 31 . G C 48877.2 . AB=0.52677;ABP=16.7288;AC=7;AF=0.583333;AN=12;AO=1594;CIGAR=1X;DP=2670;DPB=2670;DPRA=0;EPP=3464.34;EPPR=2335.17;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999373;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=63140;QR=42398;RO=1074;RPL=0;RPP=3464.34;RPPR=2335.17;RPR=1594;RUN=1;SAF=1594;SAP=3464.34;SAR=0;SRF=1074;SRP=2335.17;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:308:137,171:137:5375:171:6705:-510.444,0,-390.895 0/1:395:254,140:254:10001:140:5568:-381.934,0,-780.458 0/1:490:250,239:250:9761:239:9505:-707.401,0,-730.45 0/1:530:337,193:337:13447:193:7643:-527.942,0,-1049.69 0/1:481:63,418:63:2505:418:16541:-1342.62,0,-80.7952 1/1:466:33,433:33:1309:433:17178:-1426.59,-22.2049,0 dDocent_Contig_5497 107 . N T 65.5375 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=69;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5498 83 . T G 143.521 . AB=0.158537;ABP=86.0559;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=317;DPB=317;DPRA=1.37234;EPP=37.7539;EPPR=656.623;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.833887;PAO=0;PQA=0;PQR=0;PRO=0;QA=552;QR=9241;RO=301;RPL=16;RPP=37.7539;RPPR=656.623;RPR=0;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=301;SRP=656.623;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:42:42,0:42:1278:0:0:0,-12.6433,-115.298 0/0:64:64,0:64:1995:0:0:0,-19.2659,-179.816 0/0:35:35,0:35:1045:0:0:0,-10.536,-94.3285 0/0:47:47,0:47:1456:0:0:0,-14.1484,-131.318 0/0:47:44,3:44:1339:3:105:0,-4.35225,-110.988 0/1:82:69,13:69:2128:13:447:-15.8749,0,-167.101 dDocent_Contig_5499 13 . G A 652.385 . AB=0.285714;ABP=42.0968;AC=2;AF=0.166667;AN=12;AO=29;CIGAR=1X;DP=253;DPB=253;DPRA=1.2193;EPP=65.983;EPPR=489.42;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.724138;PAIREDR=0.602679;PAO=0;PQA=0;PQR=0;PRO=0;QA=1121;QR=8660;RO=224;RPL=0;RPP=65.983;RPPR=489.42;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=224;SRP=489.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:38,0:38:1502:0:0:0,-11.4391,-135.435 0/0:43:43,0:43:1639:0:0:0,-12.9443,-147.748 0/0:33:33,0:33:1308:0:0:0,-9.93399,-117.988 0/0:41:40,1:40:1501:1:40:0,-8.34655,-131.343 0/1:43:24,19:24:953:19:735:-53.5219,0,-73.1322 0/1:55:46,9:46:1757:9:346:-14.9384,0,-141.8 dDocent_Contig_5501 32 . G A 38818.4 . AB=0.719767;ABP=724.565;AC=6;AF=0.5;AN=12;AO=1238;CIGAR=1X;DP=1720;DPB=1720;DPRA=0;EPP=2691.29;EPPR=1049.66;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998384;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=49037;QR=19089;RO=482;RPL=0;RPP=2691.29;RPPR=1049.66;RPR=1238;RUN=1;SAF=1238;SAP=2691.29;SAR=0;SRF=482;SRP=1049.66;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:174:74,100:74:2934:100:3972:-305.1,0,-211.786 0/1:267:82,185:82:3270:185:7334:-579.357,0,-213.997 0/1:294:54,240:54:2153:240:9550:-770.429,0,-105.433 0/1:271:93,178:93:3646:178:7048:-552.436,0,-246.597 0/1:336:97,239:97:3819:239:9452:-748.986,0,-242.589 0/1:378:82,296:82:3267:296:11681:-936.755,0,-180.299 dDocent_Contig_5502 1 . N G 149.672 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=7.37776;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=162;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:162:-14.967,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5503 107 . N T 61.7453 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=65;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:65:-6.17345,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5504 9 . C A 17367.6 . AB=0.443588;ABP=42.4544;AC=6;AF=0.5;AN=12;AO=633;CIGAR=1X;DP=1427;DPB=1427;DPRA=0;EPP=1377.55;EPPR=1727.16;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.99842;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=24189;QR=30450;RO=794;RPL=0;RPP=1377.55;RPPR=1727.16;RPR=633;RUN=1;SAF=633;SAP=1377.55;SAR=0;SRF=794;SRP=1727.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:228:129,99:129:4967:99:3793:-272.844,0,-378.413 0/1:242:136,106:136:5207:106:4032:-290.121,0,-395.78 0/1:171:117,54:117:4477:54:2054:-133.614,0,-351.508 0/1:321:124,197:124:4771:197:7552:-582.887,0,-332.79 0/1:153:113,40:113:4321:40:1497:-88.9464,0,-342.901 0/1:312:175,137:175:6707:137:5261:-379.569,0,-509.595 dDocent_Contig_5505 37 . C T 180.231 . AB=0.157895;ABP=80.269;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=237;DPB=237;DPRA=0.795455;EPP=31.2394;EPPR=489.42;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=523;QR=8938;RO=224;RPL=0;RPP=31.2394;RPPR=489.42;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=224;SRP=489.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:637:0:0:0,-4.81648,-57.6608 0/0:29:28,1:28:1127:1:41:0,-4.6353,-97.6193 0/1:24:20,4:20:794:4:154:-7.00816,0,-64.5519 0/1:52:44,8:44:1755:8:328:-14.2368,0,-142.508 0/0:48:48,0:48:1901:0:0:0,-14.4494,-171.28 0/0:68:68,0:68:2724:0:0:0,-20.47,-245.27 dDocent_Contig_5506 13 . T C 705.422 . AB=0.175109;ABP=636.543;AC=4;AF=0.333333;AN=12;AO=139;CIGAR=1M1X1M1X3M1X3M1X2M1X;DP=893;DPB=894.333;DPRA=0;EPP=304.845;EPPR=1555.61;GTI=0;LEN=1;MEANALT=4.16667;MQM=27.036;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.057554;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5145;QR=27948;RO=715;RPL=0;RPP=304.845;RPPR=1555.61;RPR=139;RUN=1;SAF=139;SAP=304.845;SAR=0;SRF=715;SRP=1555.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:89:81,0,7:81:3150:0,7:0,256:0,-24.3834,-283.354,-9.69036,-268.788,-266.681 0|0:113:92,6,11:92:3562:6,11:218,400:0,-17.1994,-308.072,-7.35024,-289.53,-296.716 0|1:175:140,0,28:140:5504:0,28:0,1035:-14.3247,-56.4689,-509.279,0,-452.727,-444.298 0|1:143:109,4,22:109:4261:4,22:151,810:-10.5701,-36.0113,-385.233,0,-343.098,-343.842 0|1:151:105,4,38:105:4128:4,38:151,1428:-45.8973,-70.1372,-408.567,0,-332.255,-328.182 0|1:222:188,0,33:188:7343:0,33:0,1216:-6.97201,-63.5656,-667.324,0,-603.622,-593.688 dDocent_Contig_5507 43 . G A 291.094 . AB=0.162162;ABP=113.051;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=389;DPB=389;DPRA=1.9964;EPP=42.0968;EPPR=806.455;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=708;QR=14409;RO=370;RPL=0;RPP=42.0968;RPPR=806.455;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=370;SRP=806.455;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:53:53,0:53:2052:0:0:0,-15.9546,-184.877 0/0:77:76,0:76:2960:0:0:0,-22.8783,-266.102 0/0:30:30,0:30:1176:0:0:0,-9.0309,-106.111 0/0:66:66,0:66:2569:0:0:0,-19.868,-231.355 0/0:52:52,0:52:2031:0:0:0,-15.6536,-182.99 0/1:111:93,18:93:3621:18:708:-30.6323,0,-292.519 dDocent_Contig_5508 73 . C G 2003.69 . AB=0.208566;ABP=399.169;AC=4;AF=0.333333;AN=12;AO=112;CIGAR=1X;DP=820;DPB=820;DPRA=0.948763;EPP=246.215;EPPR=1538.24;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.998586;PAO=0;PQA=0;PQR=0;PRO=0;QA=4089;QR=26029;RO=707;RPL=112;RPP=246.215;RPPR=1538.24;RPR=0;RUN=1;SAF=112;SAP=246.215;SAR=0;SRF=707;SRP=1538.24;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:98:75,23:75:2737:23:850:-47.3134,0,-217.014 0/1:160:122,38:122:4345:38:1343:-73.0003,0,-343.052 0/1:80:65,15:65:2430:15:574:-27.9188,0,-194.83 0/1:199:163,36:163:6060:36:1322:-59.3587,0,-485.475 0/0:177:177,0:177:6552:0:0:0,-53.2823,-589.632 0/0:106:105,0:105:3905:0:0:0,-31.6081,-351.172 dDocent_Contig_5509 21 . A G 571.534 . AB=0.0995745;ABP=1639.43;AC=1;AF=0.0833333;AN=12;AO=173;CIGAR=1X;DP=4943;DPB=4943;DPRA=0.886374;EPP=378.675;EPPR=10352.2;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99958;PAO=0;PQA=0;PQR=0;PRO=0;QA=6825;QR=190169;RO=4766;RPL=0;RPP=378.675;RPPR=10352.2;RPR=173;RUN=1;SAF=173;SAP=378.675;SAR=0;SRF=4766;SRP=10352.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:543:542,1:542:21627:1:41:0,-159.365,-1940.48 0/0:748:732,16:732:29150:16:646:0,-166.697,-2562.39 0/0:575:549,24:549:21962:24:959:0,-86.1468,-1888.05 0/0:992:977,15:977:38956:15:595:0,-244.735,-3448.48 0/0:910:909,0:909:36281:0:0:0,-273.636,-3261.58 0/1:1175:1057,117:1057:42193:117:4584:-58.6762,0,-3439.54 dDocent_Contig_5510 14 . C T 560.19 . AB=0.138983;ABP=336.968;AC=2;AF=0.166667;AN=12;AO=41;CIGAR=1X;DP=1184;DPB=1184;DPRA=0.663667;EPP=92.0407;EPPR=2482.83;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.999124;PAO=0;PQA=0;PQR=0;PRO=0;QA=1638;QR=45452;RO=1142;RPL=0;RPP=92.0407;RPPR=2482.83;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=1142;SRP=2482.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:219:219,0:219:8687:0:0:0,-65.9256,-781.346 0/0:223:223,0:223:8845:0:0:0,-67.1297,-795.551 0/1:209:183,26:183:7325:26:1047:-31.6066,0,-595.964 0/0:227:227,0:227:9095:0:0:0,-68.3338,-818.002 0/1:86:71,15:71:2831:15:591:-27.6343,0,-229.005 0/0:220:219,0:219:8669:0:0:0,-65.9256,-779.612 dDocent_Contig_5511 7 . A C 17667.5 . AB=0.146789;ABP=947.939;AC=1;AF=0.0833333;AN=12;AO=128;CIGAR=1X2M1X8M;DP=1327;DPB=1342.83;DPRA=0;EPP=280.959;EPPR=854.227;GTI=0;LEN=1;MEANALT=7;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=2.22045e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4890;QR=15310;RO=392;RPL=0;RPP=280.959;RPPR=854.227;RPR=128;RUN=1;SAF=128;SAP=280.959;SAR=0;SRF=392;SRP=854.227;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:144:44,26,0,20,0,54:44:1712:26,0,20,0,54:980,0,737,0,2161:-164.781,-97.7253,-230.59,-178.027,-238.416,-318.719,-117.77,-178.159,-258.461,-252.44,-178.027,-238.416,-318.719,-258.461,-318.719,0,-60.3962,-140.7,-80.4415,-140.7,-124.444 0|0:135:34,4,0,53,0,44:34:1343:4,0,53,0,44:156,0,1944,0,1750:-181.784,-179.195,-288.51,-192.019,-289.714,-302.538,-33.1541,-130.846,-143.669,-127.714,-192.019,-289.714,-302.538,-143.669,-302.538,-48.3385,-146.04,-158.864,0,-158.864,-145.618 0|0:161:26,10,1,46,0,76:26:1011:10,1,46,0,76:385,39,1678,0,3049:-296.934,-273.15,-353.218,-301.555,-353.022,-384.332,-167.703,-219.168,-247.573,-236.931,-304.761,-356.228,-384.633,-250.779,-387.839,-53.9752,-105.447,-133.854,0,-137.06,-114.182 0|0:176:66,34,0,13,0,62:66:2563:34,0,13,0,62:1312,0,493,0,2486:-184.322,-96.4457,-296.798,-204.19,-307.033,-414.779,-163.771,-266.613,-374.359,-370.446,-204.19,-307.033,-414.779,-374.359,-414.779,0,-102.846,-210.593,-170.173,-210.593,-191.929 0|0:322:154,0,40,0,16,109:154:6007:0,40,0,16,109:0,1531,0,583,4296:-307.054,-353.413,-847.18,-227.777,-721.544,-709.503,-353.413,-847.18,-721.544,-847.18,-305.793,-799.559,-673.923,-799.559,-794.743,0,-493.779,-368.143,-493.779,-446.159,-460.967 1|0:389:68,0,87,0,42,186:68:2674:0,87,0,42,186:0,3320,0,1558,7421:-643.101,-663.571,-883.528,-391.196,-611.153,-584.963,-663.571,-883.528,-611.153,-883.528,-536.094,-756.051,-483.677,-756.051,-743.408,-52.4157,-272.379,0,-272.379,-144.902,-216.387 dDocent_Contig_5512 146 . G T 81.7269 . AB=0.142857;ABP=49.5419;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=213;DPB=213;DPRA=0.937931;EPP=18.2106;EPPR=450.334;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.714286;PAIREDR=0.834951;PAO=0;PQA=0;PQR=0;PRO=0;QA=285;QR=8225;RO=206;RPL=0;RPP=18.2106;RPPR=450.334;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=450.334;SRR=206;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:34,0:34:1370:0:0:0,-10.235,-123.555 0/1:42:36,6:36:1448:6:244:-9.69556,0,-117.921 0/0:46:46,0:46:1815:0:0:0,-13.8474,-163.552 0/0:26:25,1:25:988:1:41:0,-3.73221,-85.1191 0/0:32:32,0:32:1304:0:0:0,-9.63296,-117.618 0/0:33:33,0:33:1300:0:0:0,-9.93399,-117.256 dDocent_Contig_5513 172 . A G 656.823 . AB=0.352113;ABP=16.4979;AC=1;AF=0.0833333;AN=12;AO=27;CIGAR=1X;DP=562;DPB=562;DPRA=0.406852;EPP=61.6401;EPPR=1164.75;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1055;QR=20898;RO=535;RPL=27;RPP=61.6401;RPPR=1164.75;RPR=0;RUN=1;SAF=0;SAP=61.6401;SAR=27;SRF=0;SRP=1164.75;SRR=535;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:66:66,0:66:2550:0:0:0,-19.868,-229.646 0/0:91:91,0:91:3577:0:0:0,-27.3937,-321.963 0/0:147:147,0:147:5789:0:0:0,-44.2514,-520.815 0/0:163:163,0:163:6337:0:0:0,-49.0679,-570.094 0/0:24:22,2:22:842:2:74:0,-0.200703,-69.0633 0/1:71:46,25:46:1803:25:981:-67.2048,0,-141.108 dDocent_Contig_5514 16 . T A 7586.26 . AB=0.416209;ABP=47.4062;AC=6;AF=0.5;AN=12;AO=303;CIGAR=1X;DP=728;DPB=728;DPRA=0;EPP=660.966;EPPR=925.886;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.976898;PAIREDR=0.971765;PAO=0;PQA=0;PQR=0;PRO=0;QA=10972;QR=15976;RO=425;RPL=0;RPP=660.966;RPPR=925.886;RPR=303;RUN=1;SAF=303;SAP=660.966;SAR=0;SRF=425;SRP=925.886;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:113:63,50:63:2347:50:1806:-128.776,0,-177.405 0/1:139:63,76:63:2353:76:2747:-205.591,0,-170.118 0/1:95:53,42:53:2029:42:1485:-105.315,0,-154.227 0/1:130:85,45:85:3237:45:1663:-110.798,0,-252.317 0/1:139:114,25:114:4271:25:916:-40.9088,0,-342.569 0/1:112:47,65:47:1739:65:2355:-178.458,0,-123.043 dDocent_Contig_5515 107 . N T 72.3715 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=73;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:39:-3.7049,-0.60206,0 1/1:2:0,2:0:0:2:34:-3.22996,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5517 56 . A C 399.643 . AB=0.0985442;ABP=1253.1;AC=1;AF=0.0833333;AN=12;AO=104;CIGAR=1X;DP=4676;DPB=4676;DPRA=0.991683;EPP=228.843;EPPR=9915.78;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=59.9982;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4082;QR=181084;RO=4565;RPL=104;RPP=228.843;RPPR=9915.78;RPR=0;RUN=1;SAF=104;SAP=228.843;SAR=0;SRF=4565;SRP=9915.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:584:583,0:583:23054:0:0:0,-175.5,-2072.55 0/0:757:755,0:755:29967:0:0:0,-227.278,-2694.04 0/0:657:640,16:640:25510:16:637:0,-139.92,-2236.03 0/0:820:819,0:819:32375:0:0:0,-246.544,-2910.46 0/0:965:964,0:964:38225:0:0:0,-290.193,-3436.37 0/1:893:804,88:804:31953:88:3445:-41.4872,0,-2604.28 dDocent_Contig_5518 55 . C T 6419.67 . AB=0.0793951;ABP=815.876;AC=4;AF=0.333333;AN=12;AO=53;CIGAR=1M1X18M;DP=1922;DPB=1943.9;DPRA=0;EPP=118.098;EPPR=2623.98;GTI=0;LEN=1;MEANALT=13.75;MQM=60;MQMR=60;NS=6;NUMALT=8;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2128;QR=44253;RO=1207;RPL=53;RPP=118.098;RPPR=2623.98;RPR=0;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=1207;SRP=2623.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:306:151,0,11,88,0,48,0,0,0:151:5433:0,11,88,0,48,0,0,0:0,429,2929,0,1886,0,0,0:-191.536,-236.991,-680.247,-201.725,-644.982,-641.671,0,-443.24,-407.975,-416.75,-236.991,-680.247,-644.982,-443.24,-680.247,-81.8703,-525.138,-489.872,-288.13,-525.138,-510.688,-236.991,-680.247,-644.982,-443.24,-680.247,-525.138,-680.247,-236.991,-680.247,-644.982,-443.24,-680.247,-525.138,-680.247,-680.247,-236.991,-680.247,-644.982,-443.24,-680.247,-525.138,-680.247,-680.247,-680.247 0|1:270:169,0,18,66,0,3,0,0,3:169:6116:0,18,66,0,3,0,0,3:0,662,2091,0,117,0,0,99:-117.369,-168.243,-667.52,-114.122,-613.406,-607.988,0,-499.27,-445.157,-479.402,-168.243,-667.52,-613.406,-499.27,-667.52,-158.626,-657.903,-603.79,-489.653,-657.903,-657,-168.243,-667.52,-613.406,-499.27,-667.52,-657.903,-667.52,-168.243,-667.52,-613.406,-499.27,-667.52,-657.903,-667.52,-667.52,-160.243,-659.519,-605.406,-491.27,-659.519,-649.903,-659.519,-659.519,-658.616 0|1:192:95,0,19,53,0,1,10,9,0:95:3509:0,19,53,0,1,10,9,0:0,706,1835,0,41,370,361,0:-120.513,-149.111,-436.132,-91.3355,-378.36,-372.64,0,-287.02,-229.248,-271.065,-149.111,-436.132,-378.36,-287.02,-436.132,-145.726,-432.747,-374.976,-283.635,-432.747,-432.446,-118.838,-405.861,-348.089,-256.749,-405.861,-402.477,-402.851,-119.362,-406.385,-348.614,-257.273,-406.385,-403.001,-376.115,-403.676,-149.111,-436.132,-378.36,-287.02,-436.132,-432.747,-405.861,-406.385,-436.132 0|1:337:142,0,19,94,0,7,0,33,31:142:5268:0,19,94,0,7,0,33,31:0,722,3233,0,269,0,1333,1197:-219.771,-262.518,-693.589,-203.307,-634.38,-628.66,0,-431.065,-371.856,-402.768,-262.518,-693.589,-634.38,-431.065,-693.589,-240.438,-671.51,-612.301,-408.986,-671.51,-669.403,-262.518,-693.589,-634.38,-431.065,-693.589,-671.51,-693.589,-152.616,-583.692,-524.483,-321.168,-583.692,-561.613,-583.692,-573.758,-164.215,-595.289,-536.08,-332.765,-595.289,-573.21,-595.289,-485.391,-585.957 0|0:425:332,9,0,16,28,13,0,9,0:332:12129:9,0,16,28,13,0,9,0:350,0,534,1001,520,0,359,0:0,-71.1763,-1059.49,-99.942,-1062.19,-1090.96,-56.7212,-1018.97,-1047.73,-1042.92,-18.3336,-980.588,-1009.35,-966.127,-1000.92,-57.0996,-1019.36,-1048.12,-1004.9,-966.515,-1044.21,-99.942,-1062.19,-1090.96,-1047.73,-1009.35,-1048.12,-1090.96,-70.3712,-1032.63,-1061.39,-1018.17,-979.784,-1018.55,-1061.39,-1058.68,-99.942,-1062.19,-1090.96,-1047.73,-1009.35,-1048.12,-1090.96,-1061.39,-1090.96 0|0:392:318,20,0,5,21,0,2,2,1:318:11798:20,0,5,21,0,2,2,1:776,0,175,749,0,69,75,35:0,-31.9587,-991.363,-95.7275,-997.384,-1061.14,-81.4903,-983.147,-1046.9,-1045.4,-34.6801,-936.338,-1000.1,-985.858,-993.774,-95.7275,-997.384,-1061.14,-1046.9,-1000.1,-1061.14,-90.1222,-991.779,-1055.54,-1041.3,-994.49,-1055.54,-1054.93,-89.5849,-991.242,-1055,-1040.76,-993.954,-1055,-1049.39,-1054.4,-92.8799,-994.536,-1058.29,-1044.06,-997.248,-1058.29,-1052.69,-1052.15,-1057.99 dDocent_Contig_5519 24 . T A 1971.92 . AB=0.132416;ABP=1367.93;AC=3;AF=0.25;AN=12;AO=167;CIGAR=1X;DP=2661;DPB=2661;DPRA=0.736972;EPP=365.646;EPPR=5412.15;GTI=0;LEN=1;MEANALT=1.6;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.994012;PAIREDR=0.999197;PAO=0;PQA=0;PQR=0;PRO=0;QA=6648;QR=94981;RO=2491;RPL=0;RPP=365.646;RPPR=5412.15;RPR=167;RUN=1;SAF=167;SAP=365.646;SAR=0;SRF=2491;SRP=5412.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:334:272,61:272:10367:61:2432:-118.372,0,-831.955 0/1:403:360,43:360:13704:43:1707:-32.5341,0,-1111.42 0/0:375:362,12:362:13908:12:482:0,-69.2637,-1207.21 0/1:426:376,50:376:14379:50:1995:-51.5079,0,-1165.09 0/0:555:553,1:553:21143:1:32:0,-163.926,-1898.35 0/0:568:568,0:568:21480:0:0:0,-170.985,-1931.96 dDocent_Contig_5520 107 . N T 100.647 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=101;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:67:-6.36304,-0.60206,0 dDocent_Contig_5521 13 . G A 392.247 . AB=0.161491;ABP=163.254;AC=4;AF=0.333333;AN=12;AO=32;CIGAR=1X;DP=262;DPB=262;DPRA=0;EPP=72.4974;EPPR=502.449;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.96875;PAIREDR=0.930435;PAO=0;PQA=0;PQR=0;PRO=0;QA=1282;QR=8992;RO=230;RPL=0;RPP=72.4974;RPPR=502.449;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=230;SRP=502.449;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:47:40,7:40:1596:7:287:-12.0568,0,-129.726 0/1:41:36,5:36:1415:5:198:-5.85427,0,-115.256 0/1:41:36,5:36:1407:5:201:-6.12887,0,-114.541 0/1:32:23,9:23:869:9:352:-22.4065,0,-68.8729 0/0:56:52,4:52:2036:4:162:0,-1.89072,-168.477 0/0:45:43,2:43:1669:2:82:0,-5.76667,-142.65 dDocent_Contig_5522 67 . C T 1423.64 . AB=0.229885;ABP=278.687;AC=2;AF=0.166667;AN=12;AO=190;CIGAR=1X;DP=1800;DPB=1800;DPRA=0;EPP=415.59;EPPR=3490.39;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999377;PAO=0;PQA=0;PQR=0;PRO=0;QA=5700;QR=53544;RO=1606;RPL=190;RPP=415.59;RPPR=3490.39;RPR=0;RUN=1;SAF=190;SAP=415.59;SAR=0;SRF=1606;SRP=3490.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:239:191,48:191:6265:48:1459:-59.6399,0,-492.045 0/0:190:178,12:178:5900:12:379:0,-22.7775,-496.735 0/0:330:300,28:300:10017:28:776:0,-28.9744,-831.443 0/1:196:143,52:143:4763:52:1608:-85.9462,0,-369.809 0/0:354:351,2:351:11716:2:27:0,-103.79,-1051.87 0/0:491:443,48:443:14883:48:1451:0,-16.9431,-1208.47 dDocent_Contig_5523 105 . N C 10001.5 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=332;CIGAR=2X;DP=332;DPB=332;DPRA=0;EPP=723.939;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=11095;QR=0;RO=0;RPL=0;RPP=723.939;RPPR=0;RPR=332;RUN=1;SAF=0;SAP=723.939;SAR=332;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:129:0,129:0:0:129:4284:-385.76,-38.8329,0 1|1:105:0,105:0:0:105:3538:-318.648,-31.6082,0 1|1:72:0,72:0:0:72:2406:-216.802,-21.6742,0 1|1:26:0,26:0:0:26:867:-78.3377,-7.82678,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_5524 85 . C T 4875.69 . AB=0.523077;ABP=4.81429;AC=6;AF=0.5;AN=12;AO=204;CIGAR=1X;DP=390;DPB=390;DPRA=0;EPP=445.991;EPPR=404.733;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.892157;PAIREDR=0.902703;PAO=0;PQA=0;PQR=0;PRO=0;QA=6827;QR=6263;RO=185;RPL=204;RPP=445.991;RPPR=404.733;RPR=0;RUN=1;SAF=204;SAP=445.991;SAR=0;SRF=185;SRP=404.733;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:14,18:14:477:18:614:-45.9483,0,-33.6228 0/1:66:35,31:35:1170:31:1023:-72.5002,0,-85.7307 0/1:58:24,34:24:807:34:1138:-85.2591,0,-55.4811 0/1:92:57,34:57:1941:34:1125:-73.8141,0,-147.236 0/1:81:24,57:24:797:57:1893:-146.261,0,-47.6544 0/1:61:31,30:31:1071:30:1034:-75.0079,0,-78.3377 dDocent_Contig_5525 64 . A T 862.076 . AB=0.245283;ABP=92.6143;AC=5;AF=0.416667;AN=12;AO=39;CIGAR=1X;DP=174;DPB=174;DPRA=2.12;EPP=87.6977;EPPR=296.159;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.564103;PAIREDR=0.851852;PAO=0;PQA=0;PQR=0;PRO=0;QA=1571;QR=5389;RO=135;RPL=39;RPP=87.6977;RPPR=296.159;RPR=0;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=135;SRP=296.159;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:25,3:25:1003:3:122:-2.94365,0,-82.1378 0/1:30:27,3:27:1073:3:120:-2.157,0,-87.8305 0/0:15:15,0:15:605:0:0:0,-4.51545,-54.7885 0/1:28:22,6:22:883:6:242:-13.7287,0,-71.3496 0/1:51:35,16:35:1392:16:645:-43.0325,0,-110.184 0/1:22:11,11:11:433:11:442:-33.5126,0,-32.6989 dDocent_Contig_5526 30 . C T 3874.66 . AB=0.118094;ABP=4176.04;AC=4;AF=0.333333;AN=12;AO=396;CIGAR=1X;DP=5183;DPB=5183;DPRA=0;EPP=862.913;EPPR=10391.3;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999164;PAO=0;PQA=0;PQR=0;PRO=0;QA=15649;QR=190770;RO=4784;RPL=0;RPP=862.913;RPPR=10391.3;RPR=396;RUN=1;SAF=396;SAP=862.913;SAR=0;SRF=4784;SRP=10391.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:746:650,96:650:25950:96:3770:-114.74,0,-2108.64 0/1:886:791,94:791:31476:94:3731:-68.9806,0,-2563.14 0/1:815:702,112:702:27863:112:4466:-156.483,0,-2259.78 0/1:847:759,87:759:30298:87:3439:-54.485,0,-2468.95 0/0:985:984,1:984:39304:1:10:0,-295.515,-3532.65 0/0:904:898,6:898:35879:6:233:0,-250.795,-3204.42 dDocent_Contig_5527 25 . T C 579.943 . AB=0.214286;ABP=92.3509;AC=2;AF=0.166667;AN=12;AO=37;CIGAR=1X;DP=391;DPB=391;DPRA=0.981061;EPP=83.3548;EPPR=771.712;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.837838;PAIREDR=0.822034;PAO=0;PQA=0;PQR=0;PRO=0;QA=1496;QR=14069;RO=354;RPL=0;RPP=83.3548;RPPR=771.712;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=354;SRP=771.712;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:28,9:28:1112:9:360:-21.6246,0,-89.2276 0/0:81:75,6:75:2988:6:239:0,-2.49954,-247.127 0/0:52:48,4:48:1891:4:163:0,-0.595132,-155.34 0/1:89:71,18:71:2799:18:734:-39.5914,0,-225.23 0/0:54:54,0:54:2134:0:0:0,-16.2556,-192.241 0/0:78:78,0:78:3145:0:0:0,-23.4803,-283.112 dDocent_Contig_5528 14 . C T 9846.51 . AB=0.278967;ABP=676.883;AC=6;AF=0.5;AN=12;AO=443;CIGAR=1X3M;DP=1588;DPB=1588;DPRA=0;EPP=964.973;EPPR=2419.86;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=59.9973;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=16278;QR=44169;RO=1113;RPL=0;RPP=964.973;RPPR=2419.86;RPR=443;RUN=1;SAF=443;SAP=964.973;SAR=0;SRF=1113;SRP=2419.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:236:165,0,71:165:6587:0,71:0,2570:-160.48,-210.15,-752.679,0,-542.902,-521.529 0|1:374:281,0,89:281:11116:0,89:0,3220:-178.22,-262.809,-1177.62,0,-914.8,-888.008 0|1:274:174,0,97:174:6927:0,97:0,3578:-240.195,-292.575,-862.957,0,-570.365,-541.166 0|1:263:196,0,66:196:7791:0,66:0,2481:-144.22,-203.222,-844.663,0,-641.413,-621.545 0|1:184:111,12,60:111:4380:12,60:468,2200:-146.368,-141.31,-498.087,0,-321.907,-342.313 0|1:257:186,7,60:186:7368:7,60:275,2229:-126.39,-159.76,-764.087,0,-583.796,-588.353 dDocent_Contig_5529 24 . A G 32.2521 . AB=0.0921053;ABP=222.672;AC=1;AF=0.0833333;AN=12;AO=24;CIGAR=1X;DP=1008;DPB=1008;DPRA=1.07994;EPP=55.1256;EPPR=2139.74;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.971545;PAO=0;PQA=0;PQR=0;PRO=0;QA=958;QR=39163;RO=984;RPL=0;RPP=55.1256;RPPR=2139.74;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=984;SRP=2139.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:152:138,14:138:5497:14:554:-4.4468,0,-448.813 0/0:192:187,5:187:7406:5:204:0,-39.0537,-647.431 0/0:108:108,0:108:4340:0:0:0,-32.5112,-390.531 0/0:154:151,3:151:6042:3:122:0,-34.9861,-532.167 0/0:191:189,2:189:7461:2:78:0,-50.0934,-663.728 0/0:211:211,0:211:8417:0:0:0,-63.5173,-757.045 dDocent_Contig_5530 98 . N T 38.0082 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=40;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:40:-3.79967,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5531 1 . N G 110.956 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=119;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:119:-11.095,-0.90309,0 ./.:.:.:.:.:.:.:. dDocent_Contig_5532 26 . A C 6033.32 . AB=0.0698529;ABP=440.147;AC=0;AF=0;AN=12;AO=19;CIGAR=1X3M1X;DP=436;DPB=436;DPRA=0;EPP=44.2683;EPPR=450.334;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=760;QR=7994;RO=206;RPL=0;RPP=44.2683;RPPR=450.334;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=206;SRP=450.334;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:42:22,0,20:22:869:0,20:0,792:-58.956,-65.5787,-137.087,0,-71.9038,-65.8832 0|0:66:17,0,48:17:669:0,48:0,1892:-150.749,-155.866,-210.901,0,-55.2355,-40.7861 0|0:149:60,2,87:60:2302:2,87:80,3426:-263.752,-275.223,-463.545,0,-182.322,-162.723 0|0:56:31,0,25:31:1190:0,25:0,965:-70.2915,-79.6234,-177.293,0,-98.0546,-90.5288 0|0:36:25,4,6:25:974:4,6:162,231:-11.451,-5.60106,-84.4743,0,-66.7137,-78.2689 0|0:87:51,13,23:51:1990:13,23:518,908:-59.3551,-32.0501,-191.712,0,-120.914,-156.649 dDocent_Contig_5533 31 . C T 197.689 . AB=0.116959;ABP=220.932;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=1203;DPB=1203;DPRA=0.828488;EPP=46.4397;EPPR=2567.52;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=805;QR=46879;RO=1181;RPL=0;RPP=46.4397;RPPR=2567.52;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=1181;SRP=2567.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:223:223,0:223:8802:0:0:0,-67.1297,-791.711 0/0:307:306,0:306:12169:0:0:0,-92.1152,-1094.25 0/0:153:153,0:153:6110:0:0:0,-46.0576,-549.672 0/0:284:284,0:284:11250:0:0:0,-85.4925,-1011.74 0/0:65:64,0:64:2557:0:0:0,-19.2659,-230.166 0/1:171:151,20:151:5991:20:805:-21.2918,0,-487.504 dDocent_Contig_5534 98 . N G 157.613 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=155;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:68:-6.45788,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:17:-1.69998,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_5535 15 . T C 282.109 . AB=0.155738;ABP=128.6;AC=3;AF=0.25;AN=12;AO=19;CIGAR=1X;DP=243;DPB=243;DPRA=1.00826;EPP=44.2683;EPPR=489.42;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.578947;PAIREDR=0.785714;PAO=0;PQA=0;PQR=0;PRO=0;QA=767;QR=8923;RO=224;RPL=0;RPP=44.2683;RPPR=489.42;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=224;SRP=489.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:33,5:33:1298:5:202:-7.12235,0,-105.639 0/1:51:41,10:41:1640:10:402:-21.1859,0,-132.477 0/1:33:29,4:29:1164:4:163:-5.12444,0,-95.1032 0/0:46:46,0:46:1808:0:0:0,-13.8474,-162.923 0/0:23:23,0:23:927:0:0:0,-6.92369,-83.7313 0/0:52:52,0:52:2086:0:0:0,-15.6536,-187.916 dDocent_Contig_5536 16 . C T 11220.7 . AB=0.18537;ABP=2753.61;AC=5;AF=0.416667;AN=12;AO=629;CIGAR=1X;DP=3673;DPB=3673;DPRA=0;EPP=1368.87;EPPR=6612.97;GTI=0;LEN=1;MEANALT=1;MQM=56.1955;MQMR=56.3354;NS=6;NUMALT=1;ODDS=0;PAIRED=0.779014;PAIREDR=0.801577;PAO=0;PQA=0;PQR=0;PRO=0;QA=25256;QR=121961;RO=3044;RPL=0;RPP=1368.87;RPPR=6612.97;RPR=629;RUN=1;SAF=629;SAP=1368.87;SAR=0;SRF=3044;SRP=6612.97;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:464:419,45:419:16808:45:1814:-20.3157,0,-1339.71 0/1:699:596,103:596:23978:103:4135:-130.449,0,-1907.48 0/0:474:438,36:438:17502:36:1453:0,-17.0794,-1392.18 0/1:601:532,69:532:21213:69:2772:-59.2891,0,-1686.03 0/1:737:543,194:543:21762:194:7738:-473.475,0,-1694.67 0/1:698:516,182:516:20698:182:7344:-447.759,0,-1581.59 dDocent_Contig_5537 31 . A G 363.715 . AB=0.158228;ABP=163.314;AC=4;AF=0.333333;AN=12;AO=29;CIGAR=1X;DP=230;DPB=230;DPRA=0;EPP=65.983;EPPR=439.476;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.862069;PAIREDR=0.825871;PAO=0;PQA=0;PQR=0;PRO=0;QA=1137;QR=7953;RO=201;RPL=0;RPP=65.983;RPPR=439.476;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=201;SRP=439.476;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:32,1:32:1246:1:40:0,-5.93831,-108.414 0/1:50:44,6:44:1742:6:226:-5.64364,0,-141.953 0/0:39:36,3:36:1426:3:121:0,-0.459973,-117.32 0/1:25:23,2:23:913:2:81:-0.159984,0,-74.9531 0/1:33:23,10:23:920:10:386:-25.1564,0,-73.1709 0/1:50:43,7:43:1706:7:283:-10.7921,0,-138.72 dDocent_Contig_5538 38 . A T 65.8896 . AB=0.1;ABP=239.266;AC=1;AF=0.0833333;AN=12;AO=27;CIGAR=1X;DP=1392;DPB=1392;DPRA=0.636364;EPP=61.6401;EPPR=2967.07;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.942125;PAO=0;PQA=0;PQR=0;PRO=0;QA=1026;QR=49390;RO=1365;RPL=0;RPP=61.6401;RPPR=2967.07;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=1365;SRP=2967.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:232:232,0:232:8306:0:0:0,-69.839,-747.463 0/0:242:242,0:242:8806:0:0:0,-72.8493,-792.434 0/0:316:316,0:316:11482:0:0:0,-95.1255,-1033.11 0/0:266:266,0:266:9579:0:0:0,-80.074,-861.955 0/1:170:153,17:153:5576:17:655:-8.11184,0,-450.726 0/0:166:156,10:156:5641:10:371:0,-16.2336,-474.003 dDocent_Contig_5539 98 . N T 407.457 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=14;CIGAR=1X;DP=14;DPB=14;DPRA=0;EPP=33.4109;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=437;QR=0;RO=0;RPL=14;RPP=33.4109;RPPR=0;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:6:0,6:0:0:6:167:-15.3046,-1.80618,0 1/1:5:0,5:0:0:5:171:-15.7266,-1.50515,0 1/1:3:0,3:0:0:3:99:-9.23712,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5540 25 . T C 453.606 . AB=0.15;ABP=215.815;AC=4;AF=0.333333;AN=12;AO=33;CIGAR=1X;DP=304;DPB=304;DPRA=0;EPP=74.6689;EPPR=591.479;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.787879;PAIREDR=0.693727;PAO=0;PQA=0;PQR=0;PRO=0;QA=1338;QR=10063;RO=271;RPL=0;RPP=74.6689;RPPR=591.479;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=271;SRP=591.479;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:43:42,1:42:1577:1:40:0,-8.94861,-138.198 0/0:61:59,2:59:2200:2:80:0,-10.771,-190.63 0/1:45:40,5:40:1469:5:204:-5.19768,0,-118.931 0/1:60:55,5:55:2028:5:200:-0.317908,0,-164.689 0/1:41:34,7:34:1245:7:285:-13.6822,0,-99.9933 0/1:54:41,13:41:1544:13:529:-31.701,0,-122.968 dDocent_Contig_5541 65 . C G 1471.47 . AB=0.273543;ABP=102.343;AC=2;AF=0.166667;AN=12;AO=61;CIGAR=1X;DP=443;DPB=443;DPRA=2.02727;EPP=135.47;EPPR=817.312;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.983607;PAIREDR=0.994667;PAO=0;PQA=0;PQR=0;PRO=0;QA=2397;QR=14430;RO=375;RPL=61;RPP=135.47;RPPR=817.312;RPR=0;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=375;SRP=817.312;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:74:73,0:73:2808:0:0:0,-21.9752,-252.764 0/0:71:70,0:70:2673:0:0:0,-21.0721,-240.682 0/0:30:30,0:30:1167:0:0:0,-9.0309,-105.309 0/0:45:45,0:45:1721:0:0:0,-13.5463,-155.117 0/1:99:75,19:75:2890:19:752:-39.412,0,-231.647 0/1:124:82,42:82:3171:42:1645:-110.957,0,-248.151 dDocent_Contig_5542 1 . N G 69.3179 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=73;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:73:-6.9307,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5543 64 . A G 213.29 . AB=0.148515;ABP=111.39;AC=1;AF=0.0833333;AN=12;AO=23;CIGAR=1X;DP=903;DPB=903;DPRA=0.663717;EPP=52.9542;EPPR=1913.91;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996591;PAO=0;PQA=0;PQR=0;PRO=0;QA=903;QR=34891;RO=880;RPL=23;RPP=52.9542;RPPR=1913.91;RPR=0;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=880;SRP=1913.91;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:124:116,8:116:4614:8:315:0,-8.61238,-386.471 0/1:101:86,15:86:3444:15:588:-22.8519,0,-279.597 0/0:66:66,0:66:2575:0:0:0,-19.868,-231.883 0/0:99:99,0:99:3883:0:0:0,-29.802,-349.472 0/0:223:223,0:223:8815:0:0:0,-67.1297,-792.862 0/0:290:290,0:290:11560:0:0:0,-87.2987,-1039.62 dDocent_Contig_5544 24 . G A 3317.16 . AB=0.123125;ABP=3129.19;AC=3;AF=0.25;AN=12;AO=313;CIGAR=2X;DP=5559;DPB=5559;DPRA=1.06857;EPP=682.681;EPPR=11383.7;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=12257;QR=204350;RO=5241;RPL=0;RPP=682.681;RPPR=11383.7;RPR=313;RUN=1;SAF=313;SAP=682.681;SAR=0;SRF=5241;SRP=11383.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:738:668,69:668:25963:69:2724:-23.3337,0,-2112.75 0|1:925:797,128:797:31043:128:5038:-174.887,0,-2512.96 0|0:672:671,0:671:26150:0:0:0,-201.991,-2351.37 0|1:871:755,115:755:29315:115:4455:-138.716,0,-2373.83 0|0:1100:1099,0:1099:42939:0:0:0,-330.832,-3860.8 0|0:1253:1251,1:1251:48940:1:40:0,-373.293,-4396.42 dDocent_Contig_5545 85 . A C 1302.37 . AB=0.0394089;ABP=377.07;AC=0;AF=0;AN=12;AO=8;CIGAR=2M1X8M;DP=329;DPB=330.636;DPRA=0;EPP=20.3821;EPPR=411.424;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=60;NS=6;NUMALT=8;ODDS=0;PAIRED=1;PAIREDR=0.954082;PAO=0;PQA=0;PQR=0;PRO=0;QA=287;QR=6655;RO=196;RPL=8;RPP=20.3821;RPPR=428.619;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=194;SRP=411.424;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:55:36,0,0,1,0,6,5,7,0:36:1239:0,0,1,0,6,5,7,0:0,0,36,0,201,166,234,0:-8.10841,-18.9455,-119.583,-18.9455,-119.583,-119.583,-16.0067,-116.646,-116.646,-116.345,-18.9455,-119.583,-119.583,-116.646,-119.583,-2.66811,-103.307,-103.307,-100.369,-103.307,-101.501,-5.51689,-106.155,-106.155,-103.217,-106.155,-89.8781,-104.649,0,-100.638,-100.638,-97.7006,-100.638,-84.3619,-87.2098,-98.5312,-18.9455,-119.583,-119.583,-116.646,-119.583,-103.307,-106.155,-100.638,-119.583 0|0:84:60,0,6,3,0,0,2,11,1:60:2035:0,6,3,0,0,2,11,1:0,184,108,0,0,70,385,33:-13.2725,-31.3343,-196.357,-16.5955,-181.61,-179.804,-22.519,-187.544,-172.797,-186.641,-31.3343,-196.357,-181.61,-187.544,-196.357,-31.3343,-196.357,-181.61,-187.544,-196.357,-196.357,-25.6378,-190.661,-175.914,-181.848,-190.661,-190.661,-190.059,0,-165.03,-150.283,-156.217,-165.03,-165.03,-159.334,-161.719,-28.6665,-193.689,-178.942,-184.876,-193.689,-193.689,-187.993,-162.362,-193.388 0|0:64:45,0,11,4,0,0,2,0,0:45:1521:0,11,4,0,0,2,0,0:0,375,143,0,0,69,0,0:-16.8736,-30.42,-153.712,0,-123.286,-119.974,-18.7569,-142.051,-111.624,-140.847,-30.42,-153.712,-123.286,-142.051,-153.712,-30.42,-153.712,-123.286,-142.051,-153.712,-153.712,-24.8143,-148.106,-117.68,-136.445,-148.106,-148.106,-147.504,-30.42,-153.712,-123.286,-142.051,-153.712,-153.712,-148.106,-153.712,-30.42,-153.712,-123.286,-142.051,-153.712,-153.712,-148.106,-153.712,-153.712 0|0:47:30,0,0,0,2,0,5,10,0:30:1018:0,0,0,2,0,5,10,0:0,0,0,72,0,173,346,0:-19.085,-28.1159,-110.668,-28.1159,-110.668,-110.668,-28.1159,-110.668,-110.668,-110.668,-22.2395,-104.793,-104.793,-104.793,-104.19,-28.1159,-110.668,-110.668,-110.668,-104.793,-110.668,-14.0574,-96.6085,-96.6085,-96.6085,-90.7328,-96.6085,-95.1034,0,-82.5489,-82.5489,-82.5489,-76.673,-82.5489,-68.489,-79.5386,-28.1159,-110.668,-110.668,-110.668,-104.793,-110.668,-96.6085,-82.5489,-110.668 0|0:26:10,3,0,0,5,0,3,0,5:10:334:3,0,0,5,0,3,0,5:102,0,0,172,0,102,0,171:-10.96,-5.69687,-31.8303,-13.9703,-32.7334,-41.0074,-13.9703,-32.7334,-41.0074,-41.0074,0,-18.7627,-27.0369,-27.0369,-25.5317,-13.9703,-32.7334,-41.0074,-41.0074,-27.0369,-41.0074,-5.69677,-24.4593,-32.7333,-32.7333,-18.7626,-32.7333,-31.8302,-13.9703,-32.7334,-41.0074,-41.0074,-27.0369,-41.0074,-32.7333,-41.0074,-0.0906113,-18.8529,-27.1271,-27.1271,-13.1559,-27.1271,-18.8528,-27.1271,-25.6219 0|0:53:15,0,0,0,27,0,1,1,8:15:508:0,0,0,27,0,1,1,8:0,0,0,953,0,31,35,264:-73.1041,-77.6195,-118.807,-77.6195,-118.807,-118.807,-77.6195,-118.807,-118.807,-118.807,0,-41.1938,-41.1938,-41.1938,-33.066,-77.6195,-118.807,-118.807,-118.807,-41.1938,-118.807,-75.132,-116.319,-116.319,-116.319,-38.7063,-116.319,-116.018,-74.7717,-115.959,-115.959,-115.959,-38.3455,-115.959,-113.471,-115.658,-56.2795,-97.4647,-97.4647,-97.4647,-19.8518,-97.4647,-94.9771,-94.6169,-95.0565 dDocent_Contig_5546 13 . C A 4007.25 . AB=0.175039;ABP=1171.56;AC=6;AF=0.5;AN=12;AO=223;CIGAR=1X;DP=1274;DPB=1274;DPRA=0;EPP=487.249;EPPR=2285.23;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8822;QR=42106;RO=1051;RPL=0;RPP=487.249;RPPR=2285.23;RPR=223;RUN=1;SAF=223;SAP=487.249;SAR=0;SRF=1051;SRP=2285.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:156:127,29:127:5071:29:1110:-53.2111,0,-409.303 0/1:399:313,86:313:12551:86:3439:-189.446,0,-1008.54 0/1:217:190,27:190:7591:27:1067:-30.9976,0,-617.452 0/1:269:243,26:243:9736:26:1009:-10.1195,0,-794.643 0/1:87:79,8:79:3185:8:319:-2.88695,0,-260.513 0/1:146:99,47:99:3972:47:1878:-125.276,0,-313.5 dDocent_Contig_5547 8 . G A 254.859 . AB=0.0981432;ABP=1060.63;AC=1;AF=0.0833333;AN=12;AO=157;CIGAR=1X;DP=4469;DPB=4469;DPRA=0.704582;EPP=343.931;EPPR=9353.37;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999768;PAO=0;PQA=0;PQR=0;PRO=0;QA=6005;QR=164497;RO=4306;RPL=0;RPP=343.931;RPPR=9353.37;RPR=157;RUN=1;SAF=157;SAP=343.931;SAR=0;SRF=4306;SRP=9353.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:588:565,23:565:21618:23:872:0,-98.2072,-1865.64 0/0:748:729,17:729:27907:17:656:0,-165.581,-2450.61 0/0:524:480,43:480:18264:43:1656:0,-8.52689,-1493.55 0/1:754:679,74:679:26005:74:2821:-27.0088,0,-2111.88 0/0:910:910,0:910:34826:0:0:0,-273.937,-3132.2 0/0:945:943,0:943:35877:0:0:0,-283.871,-3226.39 dDocent_Contig_5548 22 . C T 2043.35 . AB=0.123246;ABP=1233.45;AC=3;AF=0.25;AN=12;AO=156;CIGAR=2M1X;DP=1532;DPB=1725.67;DPRA=0;EPP=341.76;EPPR=2804.21;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.891026;PAIREDR=0.968992;PAO=0;PQA=0;PQR=0;PRO=0;QA=6060;QR=49931;RO=1290;RPL=0;RPP=341.76;RPPR=2804.21;RPR=156;RUN=1;SAF=156;SAP=341.76;SAR=0;SRF=1290;SRP=2804.21;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:123:96,5,22:96:3730:5,22:172,817:-37.9625,-52.9022,-357.891,0,-292.56,-299.899 0|0:322:246,48,24:246:9484:48,24:1742,944:-68.1665,0,-764.302,-64.5573,-701.1,-836.099 0|1:190:163,0,26:163:6301:0,26:0,1023:-35.2138,-84.2817,-601.774,0,-517.629,-509.802 0|0:215:186,17,12:186:7207:17,12:612,479:0,-6.08543,-592.994,-16.525,-558.661,-604.975 0|0:319:287,11,21:287:11089:11,21:390,805:0,-54.6387,-962.031,-20.3128,-899.278,-924.722 0|1:363:312,0,51:312:12120:0,51:0,1992:-70.2138,-164.135,-1160,0,-996.25,-980.898 dDocent_Contig_5549 87 . T A 6435.81 . AB=0.211416;ABP=1371.62;AC=6;AF=0.5;AN=12;AO=400;CIGAR=1X;DP=1892;DPB=1892;DPRA=0;EPP=871.599;EPPR=3238.5;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996644;PAO=0;PQA=0;PQR=0;PRO=0;QA=13584;QR=50735;RO=1490;RPL=400;RPP=871.599;RPPR=3238.5;RPR=0;RUN=1;SAF=400;SAP=871.599;SAR=0;SRF=1490;SRP=3238.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:224:186,38:186:6318:38:1301:-49.9604,0,-501.328 0/1:298:223,75:223:7548:75:2527:-137.981,0,-589.711 0/1:433:325,107:325:11096:107:3637:-197.439,0,-868.511 0/1:266:196,69:196:6726:69:2379:-134.253,0,-525.342 0/1:347:310,37:310:10563:37:1239:-7.35141,0,-846.209 0/1:324:250,74:250:8484:74:2501:-127.817,0,-666.096 dDocent_Contig_5550 122 . A G 82.0508 . AB=0.153846;ABP=70.66;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=206;DPB=206;DPRA=0.921986;EPP=24.725;EPPR=428.619;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.8;PAIREDR=0.75;PAO=0;PQA=0;PQR=0;PRO=0;QA=337;QR=6601;RO=196;RPL=0;RPP=24.725;RPPR=428.619;RPR=10;RUN=1;SAF=0;SAP=24.725;SAR=10;SRF=0;SRP=428.619;SRR=196;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:36,0:36:1158:0:0:0,-10.8371,-104.506 0/0:24:24,0:24:828:0:0:0,-7.22472,-74.8363 0/1:32:27,5:27:925:5:165:-5.54257,0,-73.928 0/1:33:28,5:28:904:5:172:-5.88433,0,-71.7205 0/0:50:50,0:50:1727:0:0:0,-15.0515,-155.715 0/0:31:31,0:31:1059:0:0:0,-9.33193,-95.6173 dDocent_Contig_5551 11 . C T 2907.78 . AB=0.105882;ABP=1149.8;AC=4;AF=0.333333;AN=12;AO=90;CIGAR=1M1X8M;DP=1144;DPB=1130.1;DPRA=0;EPP=198.443;EPPR=1890.02;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=59.9632;NS=6;NUMALT=2;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.997699;PAO=0;PQA=0;PQR=0;PRO=0;QA=3587;QR=33905;RO=869;RPL=0;RPP=198.443;RPPR=1890.02;RPR=90;RUN=1;SAF=90;SAP=198.443;SAR=0;SRF=869;SRP=1890.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:116:87,9,18:87:3386:9,18:360,718:-32.9378,-29.4722,-305.019,0,-248.598,-272.835 0|1:205:158,14,22:158:6129:14,22:526,878:-24.7479,-29.2358,-528.274,0,-460.182,-496.64 0|1:141:108,8,18:108:4211:8,18:324,722:-26.9837,-32.7746,-376.478,0,-319.399,-340.698 0|1:136:106,9,19:106:4160:9,19:336,757:-30.4344,-34.844,-374.246,0,-314.622,-336.409 0|0:294:223,56,0:223:8731:56,0:2157,0:-109.969,0,-701.062,-177.099,-717.92,-894.999 0|0:252:187,41,13:187:7288:41,13:1619,512:-76.9266,0,-586.655,-91.0979,-556.876,-686.18 dDocent_Contig_5552 1 . N G 77.8076 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 dDocent_Contig_5553 19 . G A 182.427 . AB=0.137255;ABP=119.589;AC=2;AF=0.166667;AN=12;AO=31;CIGAR=1X;DP=352;DPB=352;DPRA=0;EPP=70.3259;EPPR=700.053;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.709677;PAIREDR=0.510903;PAO=0;PQA=0;PQR=0;PRO=0;QA=1238;QR=12781;RO=321;RPL=0;RPP=70.3259;RPPR=700.053;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=321;SRP=700.053;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:31,3:31:1252:3:122:-1.13747,0,-102.715 0/0:75:70,5:70:2812:5:199:0,-4.28889,-234.888 0/0:57:54,3:54:2130:3:121:0,-5.87851,-180.6 0/0:64:59,5:59:2343:5:191:0,-1.70967,-193.469 0/0:54:50,4:50:1967:4:162:0,-1.28866,-162.251 0/1:68:57,11:57:2277:11:443:-19.7557,0,-184.617 dDocent_Contig_5554 24 . G A 610.522 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=5;CIGAR=6M1X3M;DP=665;DPB=663.5;DPRA=1.11399;EPP=13.8677;EPPR=1242.92;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.985989;PAO=0;PQA=0;PQR=0;PRO=0;QA=197;QR=20806;RO=571;RPL=0;RPP=13.8677;RPPR=1242.92;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=571;SRP=1242.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:90:85,0,5,0:85:3092:0,5,0:0,204,0:0,-25.5875,-278.07,-8.34867,-261.237,-259.731,-25.5875,-278.07,-261.237,-278.07 0|0:138:116,10,9,1:116:4218:10,9,1:404,356,39:0,-1.60898,-343.045,-5.62696,-316.758,-347.359,-31.714,-342.85,-346.862,-375.858 0|0:103:89,2,7,0:89:3251:2,7,0:79,285,0:0,-20.2922,-285.276,-3.40708,-262.492,-266.886,-26.7917,-285.878,-268.993,-292.379 0|0:77:71,0,1,4:71:2603:0,1,4:0,41,158:0,-21.3731,-234.151,-17.9751,-230.766,-230.465,-8.26204,-221.148,-217.763,-219.944 0|0:131:105,0,21,0:105:3803:0,21,0:0,845,0:-38.0295,-69.6377,-380.066,0,-310.423,-304.101,-69.6377,-380.066,-310.423,-380.066 0|0:126:105,1,18,0:105:3839:1,18,0:40,703,0:-26.2445,-54.5564,-367.935,0,-310.46,-308.337,-57.8527,-368.236,-313.756,-371.532 dDocent_Contig_5555 1 . N G 66.473 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=70;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.64622,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_5556 13 . G A 8025.22 . AB=0.114155;ABP=1985.37;AC=1;AF=0.0833333;AN=12;AO=175;CIGAR=1X2M1X1M1X;DP=2710;DPB=2710;DPRA=0.639816;EPP=383.018;EPPR=4094.06;GTI=0;LEN=1;MEANALT=3.75;MQM=59.8629;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.977143;PAIREDR=0.994161;PAO=0;PQA=0;PQR=0;PRO=0;QA=6870;QR=73970;RO=1884;RPL=0;RPP=383.018;RPPR=4094.06;RPR=175;RUN=1;SAF=175;SAP=383.018;SAR=0;SRF=1884;SRP=4094.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:373:204,21,77,71:204:8037:21,77,71:833,3043,2813:-188.981,-181.821,-836.686,0,-592.615,-638.006,-18.8819,-611.498,-429.676,-658.695 0|0:443:184,49,113,96:184:7260:49,113,96:1924,4507,3781:-315.775,-212.928,-795.505,0,-439.093,-563.314,-60.1474,-499.239,-286.312,-628.576 0|0:314:196,39,39,40:196:7673:39,39,40:1528,1551,1527:-68.6977,-2.05685,-621.19,0,-505.233,-619.136,-2.45264,-507.681,-505.626,-621.282 0|1:403:276,66,10,49:276:10837:66,10,49:2585,396,1934:-129.419,0,-871.389,-179.913,-858.668,-1068.16,-53.379,-732.135,-912.048,-929.887 0|0:599:553,0,45,0:553:21681:0,45,0:0,1792,0:0,-166.47,-1949.35,-18.922,-1801.8,-1788.25,-166.47,-1949.35,-1801.8,-1949.35 0|0:578:471,0,29,77:471:18482:0,29,77:0,1150,3046:-108.871,-250.656,-1770.58,-156,-1675.93,-1667.2,0,-1519.93,-1425.27,-1496.75 dDocent_Contig_5557 107 . N C 1356.05 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=46;CIGAR=1X;DP=46;DPB=46;DPRA=0;EPP=102.898;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1476;QR=0;RO=0;RPL=0;RPP=102.898;RPPR=0;RPR=46;RUN=1;SAF=0;SAP=102.898;SAR=46;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:66:-6.26831,-0.60206,0 1/1:5:0,5:0:0:5:153:-14.0721,-1.50515,0 1/1:3:0,3:0:0:3:104:-9.70309,-0.90309,0 1/1:24:0,24:0:0:24:757:-68.4224,-7.22472,0 1/1:7:0,7:0:0:7:223:-20.3831,-2.10721,0 1/1:5:0,5:0:0:5:173:-15.9102,-1.50515,0 dDocent_Contig_5558 165 . T G 313.979 . AB=0.342857;ABP=10.5174;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=114;DPB=114;DPRA=2.07143;EPP=33.4109;EPPR=220.158;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=548;QR=3813;RO=100;RPL=14;RPP=33.4109;RPPR=220.158;RPR=0;RUN=1;SAF=0;SAP=33.4109;SAR=14;SRF=0;SRP=220.158;SRR=100;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:590:0:0:0,-4.51545,-53.4362 0/0:24:24,0:24:924:0:0:0,-7.22472,-83.4525 0/1:35:23,12:23:859:12:479:-32.9205,0,-67.0825 0/0:23:21,2:21:779:2:69:0,-0.371803,-63.8622 0/0:5:5,0:5:194:0:0:0,-1.50515,-17.8297 0/0:12:12,0:12:467:0:0:0,-3.61236,-42.3774 dDocent_Contig_5559 1 . N G 76.8682 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5560 98 . N T 1763.93 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=60;CIGAR=1X;DP=60;DPB=60;DPRA=0;EPP=133.299;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1930;QR=0;RO=0;RPL=60;RPP=133.299;RPPR=0;RPR=0;RUN=1;SAF=60;SAP=133.299;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:6:0,6:0:0:6:193:-17.6873,-1.80618,0 1/1:28:0,28:0:0:28:921:-83.1943,-8.42884,0 1/1:9:0,9:0:0:9:283:-25.7763,-2.70927,0 1/1:10:0,10:0:0:10:333:-30.2938,-3.0103,0 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 1/1:6:0,6:0:0:6:168:-15.3969,-1.80618,0 dDocent_Contig_5562 76 . G C 97472.6 . AB=0.745361;ABP=820.319;AC=8;AF=0.666667;AN=12;AO=2971;CIGAR=1X;DP=3440;DPB=3440;DPRA=0;EPP=6454.45;EPPR=1017.09;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997859;PAO=0;PQA=0;PQR=0;PRO=0;QA=116405;QR=17905;RO=467;RPL=2971;RPP=6454.45;RPPR=1017.09;RPR=0;RUN=1;SAF=2971;SAP=6454.45;SAR=0;SRF=467;SRP=1017.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:402:120,281:120:4532:281:10609:-833.636,0,-287.142 0/1:507:127,380:127:4798:380:14467:-1148.75,0,-279.236 0/1:315:51,264:51:2023:264:10402:-840.699,0,-87.4299 0/1:339:99,240:99:3857:240:9531:-755.167,0,-245.108 1/1:974:28,945:28:1093:945:37274:-3252.69,-194.642,0 1/1:903:42,861:42:1602:861:34122:-2923.54,-127.426,0 dDocent_Contig_5563 98 . N T 1463.08 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=50;CIGAR=1X;DP=50;DPB=50;DPRA=0;EPP=111.584;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1601;QR=0;RO=0;RPL=50;RPP=111.584;RPPR=0;RPR=0;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:26:-2.59983,-0.30103,0 1/1:15:0,15:0:0:15:443:-40.1533,-4.51545,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:14:0,14:0:0:14:446:-40.4452,-4.21442,0 1/1:19:0,19:0:0:19:651:-58.9105,-5.71957,0 dDocent_Contig_5564 20 . T C 11921.9 . AB=0.212495;ABP=1922.13;AC=6;AF=0.5;AN=12;AO=568;CIGAR=1X;DP=2673;DPB=2673;DPRA=0;EPP=1236.41;EPPR=4573.96;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99905;PAO=0;PQA=0;PQR=0;PRO=0;QA=22310;QR=83589;RO=2105;RPL=0;RPP=1236.41;RPPR=4573.96;RPR=568;RUN=1;SAF=568;SAP=1236.41;SAR=0;SRF=2105;SRP=4573.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:420:321,99:321:12770:99:3884:-223.146,0,-1021.95 0/1:486:412,74:412:16269:74:2881:-113.11,0,-1316.66 0/1:415:344,71:344:13653:71:2769:-124.395,0,-1102.86 0/1:399:311,88:311:12323:88:3458:-191.164,0,-988.099 0/1:449:343,106:343:13675:106:4232:-245.683,0,-1094.57 0/1:504:374,130:374:14899:130:5086:-305.916,0,-1188.06 dDocent_Contig_5565 44 . T A 69.6405 . AB=0.0982659;ABP=245.525;AC=1;AF=0.0833333;AN=12;AO=44;CIGAR=1X;DP=1093;DPB=1093;DPRA=0.813702;EPP=98.5551;EPPR=2173.51;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.909091;PAIREDR=0.980898;PAO=0;PQA=0;PQR=0;PRO=0;QA=1751;QR=39102;RO=1047;RPL=0;RPP=98.5551;RPPR=2173.51;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=1047;SRP=2276.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:173:156,17:156:5670:17:666:-8.1859,0,-458.189 0/0:191:177,13:177:6519:13:527:0,-9.82857,-538.87 0/0:124:117,7:117:4317:7:276:0,-12.1198,-363.402 0/0:189:182,7:182:6891:7:282:0,-31.1426,-594.316 0/0:208:208,0:208:7915:0:0:0,-62.6142,-712.149 0/0:208:207,0:207:7790:0:0:0,-62.3132,-700.483 dDocent_Contig_5567 98 . N T 62.6547 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=2X;DP=2;DPB=5;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=1;PQA=26;PQR=0;PRO=0;QA=69;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:69:-6.26438,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_5569 10 . T C 20404.2 . AB=0.515947;ABP=4.1877;AC=5;AF=0.416667;AN=12;AO=649;CIGAR=1X;DP=1114;DPB=1114;DPRA=2.42118;EPP=1412.3;EPPR=1012.74;GTI=0;LEN=1;MEANALT=1;MQM=56.6502;MQMR=59.5763;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.924731;PAO=0;PQA=0;PQR=0;PRO=0;QA=25717;QR=18471;RO=465;RPL=0;RPP=1412.3;RPPR=1012.74;RPR=649;RUN=1;SAF=649;SAP=1412.3;SAR=0;SRF=465;SRP=1012.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:85:75,10:75:2957:10:399:-10.6815,0,-240.646 0/0:85:85,0:85:3364:0:0:0,-25.5875,-302.779 0/1:74:64,10:64:2562:10:392:-13.3532,0,-208.425 0/0:96:95,1:95:3771:1:39:0,-25.0057,-335.368 1/1:400:27,373:27:1061:373:14795:-1227.87,-24.6329,0 0/1:374:119,255:119:4756:255:10092:-793.739,0,-315.245 dDocent_Contig_5570 26 . G A 168.367 . AB=0.228571;ABP=25.4075;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=196;DPB=196;DPRA=1.08696;EPP=20.3821;EPPR=411.247;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0.542553;PAO=0;PQA=0;PQR=0;PRO=0;QA=317;QR=7261;RO=188;RPL=0;RPP=20.3821;RPPR=411.247;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=188;SRP=411.247;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:977:0:0:0,-7.52575,-88.2375 0/0:26:26,0:26:1001:0:0:0,-7.82678,-90.394 0/0:30:30,0:30:1139:0:0:0,-9.0309,-102.797 0/0:59:59,0:59:2298:0:0:0,-17.7608,-207.007 0/1:35:27,8:27:1031:8:317:-18.3596,0,-82.5557 0/0:21:21,0:21:815:0:0:0,-6.32163,-73.6739 dDocent_Contig_5571 62 . T C 142.679 . AB=0.117647;ABP=175.706;AC=2;AF=0.166667;AN=12;AO=19;CIGAR=1X;DP=351;DPB=351;DPRA=0.860465;EPP=44.2683;EPPR=723.939;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=761;QR=13043;RO=332;RPL=19;RPP=44.2683;RPPR=723.939;RPR=0;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=332;SRP=723.939;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:43:42,1:42:1607:1:41:0,-8.84972,-140.763 0/1:34:30,4:30:1180:4:163:-4.82341,0,-96.2352 0/0:43:41,2:41:1616:2:79:0,-5.44705,-138.177 0/1:102:90,12:90:3568:12:478:-12.6663,0,-290.441 0/0:60:60,0:60:2398:0:0:0,-18.0618,-215.972 0/0:69:69,0:69:2674:0:0:0,-20.7711,-240.785 dDocent_Contig_5572 8 . G T 42.8774 . AB=0.300469;ABP=76.6671;AC=3;AF=0.25;AN=12;AO=121;CIGAR=1X1M5I2M;DP=561;DPB=713.5;DPRA=0;EPP=265.758;EPPR=949.772;GTI=0;LEN=1;MEANALT=1.66667;MQM=14.8347;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1795;QR=16368;RO=436;RPL=0;RPP=265.758;RPPR=949.772;RPR=121;RUN=1;SAF=121;SAP=265.758;SAR=0;SRF=436;SRP=949.772;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:122:100,20:100:3766:20:315:0,-13.058,-315.903 0|1:137:95,41:95:3535:41:640:-5.80698,0,-277.259 0|0:134:120,14:120:4521:14:191:0,-26.7098,-393.34 0|0:92:68,23:68:2562:23:324:0,-4.24777,-207.543 0|1:16:12,4:12:437:4:64:-0.0100186,0,-34.8507 0|1:60:41,19:41:1547:19:261:-0.601195,0,-121.447 dDocent_Contig_5573 49 . C A 164.561 . AB=0.148649;ABP=82.3571;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1X;DP=440;DPB=440;DPRA=1.01724;EPP=44.2683;EPPR=917.2;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997625;PAO=0;PQA=0;PQR=0;PRO=0;QA=759;QR=16699;RO=421;RPL=0;RPP=44.2683;RPPR=917.2;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=421;SRP=917.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:74:63,11:63:2526:11:440:-17.678,0,-205.195 0/0:66:64,2:64:2563:2:82:0,-12.0883,-223.021 0/0:37:37,0:37:1449:0:0:0,-11.1381,-130.656 0/0:43:42,1:42:1687:1:38:0,-9.14702,-148.253 0/0:108:108,0:108:4223:0:0:0,-32.5112,-380.044 0/0:112:107,5:107:4251:5:199:0,-15.427,-364.256 dDocent_Contig_5574 42 . G A 136.379 . AB=0.13245;ABP=180.194;AC=3;AF=0.25;AN=12;AO=21;CIGAR=1X;DP=309;DPB=309;DPRA=0.904545;EPP=3.1137;EPPR=23.398;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0952381;PAIREDR=0.659722;PAO=0;PQA=0;PQR=0;PRO=0;QA=737;QR=10431;RO=288;RPL=0;RPP=48.6112;RPPR=619.739;RPR=21;RUN=1;SAF=10;SAP=3.1137;SAR=11;SRF=171;SRP=24.9965;SRR=117;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:47,7:47:1693:7:254:-6.95343,0,-136.372 0/1:50:42,8:42:1489:8:273:-9.84678,0,-119.221 0/1:47:42,5:42:1512:5:175:-1.94529,0,-122.191 0/0:76:76,0:76:2765:0:0:0,-22.8783,-249.033 0/0:48:47,1:47:1722:1:35:0,-10.9508,-151.72 0/0:34:34,0:34:1250:0:0:0,-10.235,-112.777 dDocent_Contig_5575 8 . G A 19460.8 . AB=0.637765;ABP=174.126;AC=6;AF=0.5;AN=12;AO=662;CIGAR=1X2M;DP=1038;DPB=1038;DPRA=0;EPP=1440.53;EPPR=765.222;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.994366;PAO=0;PQA=0;PQR=0;PRO=0;QA=25156;QR=13457;RO=355;RPL=0;RPP=1440.53;RPPR=773.883;RPR=662;RUN=1;SAF=662;SAP=1440.53;SAR=0;SRF=354;SRP=765.222;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:120:28,0,92:28:1067:0,92:0,3446:-274.157,-282.586,-370.115,0,-87.9087,-60.214 0|1:160:44,0,116:44:1665:0,116:0,4381:-346.198,-359.444,-495.939,0,-136.873,-101.953 0|1:256:104,0,150:104:3970:0,150:0,5725:-438.436,-469.743,-795.459,0,-325.776,-280.622 0|1:165:57,0,108:57:2139:0,108:0,4126:-321.755,-338.914,-514.121,0,-175.585,-143.074 0|1:191:62,16,113:62:2346:16,113:612,4298:-333.837,-302.281,-489.779,0,-142.091,-158.295 0|1:146:60,3,83:60:2270:3,83:117,3180:-242.915,-251.359,-436.539,0,-176.456,-161.088 dDocent_Contig_5576 177 . C A 6538.11 . AB=0.700306;ABP=116.969;AC=3;AF=0.25;AN=12;AO=233;CIGAR=1X;DP=939;DPB=939;DPRA=0.339893;EPP=508.963;EPPR=1536.07;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8565;QR=27541;RO=706;RPL=233;RPP=508.963;RPPR=1536.07;RPR=0;RUN=1;SAF=0;SAP=508.963;SAR=233;SRF=0;SRP=1536.07;SRR=706;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:118:23,95:23:881:95:3478:-277.645,0,-44.0636 0/0:53:49,4:49:1921:4:155:0,-1.62932,-158.762 0/1:48:9,39:9:348:39:1478:-118.844,0,-17.2226 0/1:161:66,95:66:2607:95:3454:-262.543,0,-186.302 0/0:191:191,0:191:7484:0:0:0,-57.4967,-673.22 0/0:368:368,0:368:14300:0:0:0,-110.779,-1286.01 dDocent_Contig_5577 15 . A G 16573.2 . AB=0.561616;ABP=35.657;AC=6;AF=0.5;AN=12;AO=556;CIGAR=1X;DP=990;DPB=990;DPRA=0;EPP=1210.35;EPPR=945.429;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.989209;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=21848;QR=17236;RO=434;RPL=0;RPP=1210.35;RPPR=945.429;RPR=556;RUN=1;SAF=556;SAP=1210.35;SAR=0;SRF=434;SRP=945.429;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:149:98,51:98:3905:51:1994:-134.807,0,-306.604 0/1:205:58,147:58:2286:147:5763:-456.788,0,-144.204 0/1:126:35,91:35:1396:91:3589:-285.125,0,-87.9696 0/1:203:91,112:91:3619:112:4361:-331.36,0,-264.632 0/1:135:61,74:61:2417:74:2902:-220.656,0,-177.046 0/1:172:91,81:91:3613:81:3239:-239.803,0,-273.42 dDocent_Contig_5578 12 . G A 18668.8 . AB=0.742857;ABP=433.334;AC=6;AF=0.5;AN=12;AO=624;CIGAR=1X;DP=840;DPB=840;DPRA=0;EPP=1358.01;EPPR=472.048;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998397;PAIREDR=0.990741;PAO=0;PQA=0;PQR=0;PRO=0;QA=23671;QR=8166;RO=216;RPL=0;RPP=1358.01;RPPR=472.048;RPR=624;RUN=1;SAF=624;SAP=1358.01;SAR=0;SRF=216;SRP=472.048;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:52:30,22:30:1140:22:817:-58.1947,0,-87.2444 0/1:153:25,128:25:946:128:4867:-391.999,0,-39.393 0/1:107:21,86:21:775:86:3250:-260.437,0,-37.8525 0/1:202:36,166:36:1364:166:6275:-503.873,0,-62.2376 0/1:105:36,69:36:1367:69:2642:-206.363,0,-91.7088 0/1:221:68,153:68:2574:153:5820:-457.238,0,-165.329 dDocent_Contig_5580 141 . G A 57.8367 . AB=0.0973451;ABP=480.408;AC=1;AF=0.0833333;AN=12;AO=33;CIGAR=1X;DP=1768;DPB=1768;DPRA=1.18614;EPP=74.6689;EPPR=3768.34;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99481;PAO=0;PQA=0;PQR=0;PRO=0;QA=1212;QR=66941;RO=1734;RPL=0;RPP=74.6689;RPPR=3768.34;RPR=33;RUN=1;SAF=0;SAP=74.6689;SAR=33;SRF=0;SRP=3768.34;SRR=1734;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:245:245,0:245:9353:0:0:0,-73.7523,-841.366 0/0:299:299,0:299:11597:0:0:0,-90.008,-1043.12 0/0:172:172,0:172:6716:0:0:0,-51.7772,-604.221 0/0:317:316,0:316:12232:0:0:0,-95.1255,-1100.11 0/1:339:306,33:306:11839:33:1212:-7.30655,0,-962.805 0/0:396:396,0:396:15204:0:0:0,-119.208,-1367.43 dDocent_Contig_5581 39 . T G 161.746 . AB=0.0968586;ABP=542.263;AC=1;AF=0.0833333;AN=12;AO=37;CIGAR=1X;DP=2124;DPB=2124;DPRA=1.09644;EPP=83.3548;EPPR=4528.36;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1471;QR=82602;RO=2084;RPL=0;RPP=83.3548;RPPR=4528.36;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=2084;SRP=4528.36;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:340:339,0:339:13431:0:0:0,-102.049,-1207.44 0/0:373:373,0:373:14755:0:0:0,-112.284,-1326.86 0/0:286:286,0:286:11386:0:0:0,-86.0946,-1023.99 0/0:418:417,0:417:16481:0:0:0,-125.53,-1481.64 0/0:325:325,0:325:12803:0:0:0,-97.8347,-1151.4 0/1:382:344,37:344:13746:37:1471:-17.6974,0,-1121.18 dDocent_Contig_5582 36 . G A 718.322 . AB=0.130435;ABP=603.281;AC=3;AF=0.25;AN=12;AO=78;CIGAR=1X;DP=1166;DPB=1166;DPRA=0.654212;EPP=172.385;EPPR=2365.57;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995404;PAO=0;PQA=0;PQR=0;PRO=0;QA=2999;QR=41106;RO=1088;RPL=0;RPP=172.385;RPPR=2365.57;RPR=78;RUN=1;SAF=78;SAP=172.385;SAR=0;SRF=1088;SRP=2365.57;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:184:163,21:163:6156:21:809:-17.7434,0,-498.6 0/0:266:262,4:262:9844:4:153:0,-65.9337,-871.507 0/0:121:113,8:113:4274:8:308:0,-8.343,-356.654 0/0:273:273,0:273:10353:0:0:0,-82.1812,-931.421 0/1:117:93,24:93:3507:24:933:-49.0625,0,-280.542 0/1:205:184,21:184:6972:21:796:-10.2481,0,-565.661 dDocent_Contig_5583 41 . A G 258.736 . AB=0.191176;ABP=59.3408;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=866;DPB=866;DPRA=0.48189;EPP=46.4397;EPPR=1835.73;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=808;QR=32895;RO=844;RPL=0;RPP=46.4397;RPPR=1835.73;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=844;SRP=1835.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:68:54,13:54:2071:13:524:-27.0954,0,-166.191 0/0:55:53,2:53:2050:2:81:0,-8.87092,-177.02 0/0:24:23,1:23:912:1:40:0,-3.22904,-78.3922 0/0:53:50,3:50:1947:3:122:0,-4.5821,-164.072 0/0:412:411,1:411:16041:1:41:0,-119.93,-1438.51 0/0:254:253,0:253:9874:0:0:0,-76.1606,-887.811 dDocent_Contig_5584 35 . T G 509.421 . AB=0.131833;ABP=369.165;AC=2;AF=0.166667;AN=12;AO=67;CIGAR=1X;DP=1327;DPB=1327;DPRA=0;EPP=148.499;EPPR=2739.07;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998413;PAO=0;PQA=0;PQR=0;PRO=0;QA=2683;QR=49752;RO=1260;RPL=0;RPP=148.499;RPPR=2739.07;RPR=67;RUN=1;SAF=67;SAP=148.499;SAR=0;SRF=1260;SRP=2739.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:89:73,16:73:2935:16:640:-31.1429,0,-237.452 0/1:222:197,25:197:7782:25:995:-23.0209,0,-633.174 0/0:127:119,8:119:4752:8:324:0,-8.70141,-398.068 0/0:148:136,12:136:5433:12:483:0,-0.731054,-444.996 0/0:351:346,5:346:13560:5:201:0,-87.1906,-1200.99 0/0:390:389,1:389:15290:1:40:0,-113.406,-1371.01 dDocent_Contig_5586 8 . G A 100.644 . AB=0.142857;ABP=65.0524;AC=1;AF=0.0833333;AN=12;AO=29;CIGAR=1X;DP=1097;DPB=1097;DPRA=2.47561;EPP=65.983;EPPR=2322.14;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.896552;PAIREDR=0.999064;PAO=0;PQA=0;PQR=0;PRO=0;QA=1110;QR=40756;RO=1068;RPL=0;RPP=65.983;RPPR=2322.14;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=1068;SRP=2322.14;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:210:209,1:209:7947:1:33:0,-59.9172,-711.747 0/0:251:245,6:245:9380:6:224:0,-55.039,-823.381 0/0:82:82,0:82:3121:0:0:0,-24.6845,-281.045 0/0:305:303,2:303:11546:2:76:0,-84.5995,-1031.47 0/1:56:48,8:48:1847:8:312:-11.5872,0,-149.621 0/0:193:181,12:181:6915:12:465:0,-15.8969,-580.029 dDocent_Contig_5587 22 . G A 9816.5 . AB=0.254144;ABP=858.271;AC=6;AF=0.5;AN=12;AO=414;CIGAR=1X;DP=1629;DPB=1629;DPRA=0;EPP=902;EPPR=2641.35;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.983539;PAO=0;PQA=0;PQR=0;PRO=0;QA=16473;QR=48216;RO=1215;RPL=0;RPP=902;RPPR=2641.35;RPR=414;RUN=1;SAF=414;SAP=902;SAR=0;SRF=1215;SRP=2641.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:135:99,36:99:3860:36:1433:-88.5854,0,-306.776 0/1:545:374,171:374:14812:171:6807:-448.269,0,-1167.89 0/1:268:237,31:237:9391:31:1252:-32.2723,0,-763.939 0/1:409:279,130:279:11155:130:5196:-344.377,0,-880.048 0/1:141:112,29:112:4458:29:1104:-57.1837,0,-358.717 0/1:131:114,17:114:4540:17:681:-22.185,0,-369.086 dDocent_Contig_5588 22 . G A 2102.36 . AB=0.330579;ABP=63.3449;AC=2;AF=0.166667;AN=12;AO=89;CIGAR=1X;DP=639;DPB=639;DPRA=1.25549;EPP=196.271;EPPR=1197.32;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.950909;PAO=0;PQA=0;PQR=0;PRO=0;QA=3522;QR=21880;RO=550;RPL=0;RPP=196.271;RPPR=1197.32;RPR=89;RUN=1;SAF=89;SAP=196.271;SAR=0;SRF=550;SRP=1197.32;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:56:56,0:56:2219:0:0:0,-16.8577,-199.882 0/0:126:126,0:126:4985:0:0:0,-37.9298,-448.522 0/0:89:85,4:85:3413:4:163:0,-11.7332,-292.15 0/0:126:121,5:121:4836:5:183:0,-21.1054,-418.313 0/1:185:139,46:139:5512:46:1828:-109.044,0,-440.233 0/1:57:23,34:23:915:34:1348:-104.414,0,-65.4956 dDocent_Contig_5589 37 . G A 1950.4 . AB=0.320158;ABP=74.0853;AC=2;AF=0.166667;AN=12;AO=95;CIGAR=1X;DP=676;DPB=676;DPRA=1.16502;EPP=209.3;EPPR=1262.46;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996552;PAO=0;PQA=0;PQR=0;PRO=0;QA=3580;QR=21414;RO=580;RPL=0;RPP=209.3;RPPR=1262.46;RPR=95;RUN=1;SAF=95;SAP=209.3;SAR=0;SRF=580;SRP=1262.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:108:102,6:102:3717:6:230:0,-11.4444,-313.604 0/1:167:129,38:129:4780:38:1434:-79.0717,0,-380.01 0/0:112:104,8:104:3875:8:307:0,-5.72361,-320.888 0/1:86:43,43:43:1591:43:1609:-119.191,0,-117.574 0/0:126:126,0:126:4611:0:0:0,-37.9298,-415.086 0/0:77:76,0:76:2840:0:0:0,-22.8783,-255.411 dDocent_Contig_5590 98 . N A 111.779 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=109;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 1/1:2:0,2:0:0:2:27:-2.56496,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:42:-3.9887,-0.60206,0 dDocent_Contig_5591 128 . A T 62.2828 . AB=0.145833;ABP=55.3066;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=258;DPB=258;DPRA=1.14286;EPP=18.2106;EPPR=548.05;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.792829;PAO=0;PQA=0;PQR=0;PRO=0;QA=243;QR=9455;RO=251;RPL=0;RPP=18.2106;RPPR=548.05;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=548.05;SRR=251;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:40,0:40:1524:0:0:0,-12.0412,-137.43 0/0:50:50,0:50:1873:0:0:0,-15.0515,-168.811 0/1:48:41,7:41:1569:7:243:-7.75116,0,-127.029 0/0:26:26,0:26:927:0:0:0,-7.82678,-83.725 0/0:45:45,0:45:1689:0:0:0,-13.5463,-152.269 0/0:49:49,0:49:1873:0:0:0,-14.7505,-168.817 dDocent_Contig_5592 48 . G A 69.6345 . AB=0.0898662;ABP=1531.27;AC=3;AF=0.25;AN=12;AO=101;CIGAR=1X;DP=2390;DPB=2390;DPRA=0.968704;EPP=213.729;EPPR=4453.46;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.999563;PAO=0;PQA=0;PQR=0;PRO=0;QA=3893;QR=90478;RO=2287;RPL=1;RPP=213.729;RPPR=4453.46;RPR=100;RUN=1;SAF=101;SAP=222.329;SAR=0;SRF=2287;SRP=4969.17;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:320:291,29:291:11498:29:1114:-4.22794,0,-937.701 0/0:420:414,6:414:16431:6:237:0,-104.729,-1455.82 0/1:247:225,22:225:8926:22:848:-2.28008,0,-728.49 0/1:479:436,43:436:17203:43:1662:-5.64046,0,-1402.76 0/0:409:408,0:408:16098:0:0:0,-122.82,-1447.27 0/0:515:513,1:513:20322:1:32:0,-151.87,-1824.08 dDocent_Contig_5593 34 . T A 1451.92 . AB=0.264151;ABP=79.8313;AC=5;AF=0.416667;AN=12;AO=63;CIGAR=2X;DP=239;DPB=239;DPRA=1.712;EPP=139.813;EPPR=380.846;GTI=0;LEN=1;MEANALT=1.4;MQM=40;MQMR=7.75862;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2472;QR=6955;RO=174;RPL=0;RPP=139.813;RPPR=380.846;RPR=63;RUN=1;SAF=63;SAP=139.813;SAR=0;SRF=174;SRP=380.846;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:22:21,1:21:829:1:40:0,-2.92367,-9.59673 0|1:75:64,11:64:2582:11:438:-14.2186,0,-25.9997 0|0:25:25,0:25:1012:0:0:0,-7.52575,-18.5701 0|1:43:32,10:32:1268:10:397:-20.738,0,-7.52135 1|1:33:12,20:12:477:20:766:-56.4833,-2.05162,0 0|1:41:20,21:20:787:21:831:-57.2781,0,-0.305543 dDocent_Contig_5596 8 . G A 621.039 . AB=0.285714;ABP=42.0968;AC=2;AF=0.166667;AN=12;AO=39;CIGAR=1X;DP=1072;DPB=1072;DPRA=0.516266;EPP=87.6977;EPPR=2246.14;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99516;PAO=0;PQA=0;PQR=0;PRO=0;QA=1466;QR=39284;RO=1033;RPL=0;RPP=87.6977;RPPR=2246.14;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=1033;SRP=2246.14;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:267:256,11:256:9736:11:420:0,-42.2234,-837.777 0/0:289:289,0:289:11030:0:0:0,-86.9977,-992.297 0/0:214:214,0:214:8090:0:0:0,-64.4204,-727.919 0/0:204:204,0:204:7740:0:0:0,-61.4101,-696.433 0/1:61:38,23:38:1453:23:852:-58.631,0,-112.683 0/1:37:32,5:32:1235:5:194:-6.69473,0,-100.306 dDocent_Contig_5597 28 . G A 10365 . AB=0.152477;ABP=2713.67;AC=3;AF=0.25;AN=12;AO=394;CIGAR=1M1I3M1X8M;DP=2584;DPB=2597.38;DPRA=0;EPP=858.57;EPPR=3601.14;GTI=0;LEN=1;MEANALT=10.1667;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=15543;QR=64428;RO=1657;RPL=0;RPP=858.57;RPPR=3601.14;RPR=394;RUN=1;SAF=394;SAP=858.57;SAR=0;SRF=1657;SRP=3601.14;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:323:168,90,30,8,21:168:6527:90,30,8,21:3528,1130,298,834:-239.54,0,-509.227,-197.526,-443.732,-724.809,-265.726,-511.933,-709.453,-799.633,-221.459,-467.667,-665.187,-733.388,-751.453 0|1:475:192,145,0,17,108:192:7463:145,0,17,108:5737,0,663,4298:-414.345,0,-569.596,-472.143,-613.245,-1085.39,-417.646,-558.749,-1030.89,-1025.77,-118.273,-259.374,-731.519,-677.023,-699.008 0|0:350:215,38,0,0,85:215:8399:38,0,0,85:1493,0,0,3385:-213.994,-155.921,-834.957,-278.716,-846.397,-969.192,-278.716,-846.397,-969.192,-969.192,0,-567.686,-690.482,-690.482,-664.894 0|1:507:350,66,0,0,56:350:13612:66,0,0,56:2606,0,0,2196:-109.078,0,-1098.72,-214.439,-1118.59,-1333.02,-214.439,-1118.59,-1333.02,-1333.02,-33.8683,-938.024,-1152.46,-1152.46,-1135.6 0|0:616:485,34,0,66,0:485:18871:34,0,66,0:1353,0,2478,0:-56.9571,-91.5465,-1632.15,-202.957,-1642.38,-1753.79,0,-1439.42,-1550.82,-1530.96,-202.957,-1642.38,-1753.79,-1550.82,-1753.79 0|0:313:247,21,0,16,27:247:9556:21,0,16,27:826,0,615,1071:-13.8079,-20.2146,-798.802,-88.1623,-805.124,-873.068,-37.6786,-754.639,-822.584,-817.768,0,-716.968,-784.912,-734.428,-776.785 dDocent_Contig_5598 24 . G A 16534.2 . AB=0.44416;ABP=34.779;AC=8;AF=0.666667;AN=12;AO=521;CIGAR=1X4M;DP=1173;DPB=1173;DPRA=0;EPP=1134.35;EPPR=856.399;GTI=0;LEN=1;MEANALT=3;MQM=59.9923;MQMR=60;NS=6;NUMALT=2;ODDS=2.22045e-16;PAIRED=0.988484;PAIREDR=0.994911;PAO=0;PQA=0;PQR=0;PRO=0;QA=20602;QR=15236;RO=393;RPL=0;RPP=1134.35;RPPR=856.399;RPR=521;RUN=1;SAF=521;SAP=1134.35;SAR=0;SRF=393;SRP=856.399;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:130:37,11,79:37:1442:11,79:418,3097:-243.526,-220.393,-335.605,0,-84.2574,-94.7453 1|1:217:55,65,89:55:2147:65,89:2545,3520:-305.869,-113.175,-270.097,-32.7623,0,-182.461 1|1:128:30,47,49:30:1167:47,49:1834,1946:-206.013,-64.3053,-146.054,-54.8429,0,-135.992 0|1:217:80,33,103:80:3138:33,103:1290,4078:-311.536,-229.572,-477.702,0,-152.022,-227.064 0|1:238:110,33,95:110:4260:33,95:1297,3775:-277.659,-204.095,-544.089,0,-243.249,-321.331 0|1:243:81,56,106:81:3082:56,106:2225,4186:-320.043,-161.248,-397.144,0,-69.565,-220.841 dDocent_Contig_5599 1 . N G 76.8682 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5600 30 . G A 1286.29 . AB=0.108472;ABP=2077.48;AC=2;AF=0.166667;AN=12;AO=308;CIGAR=1X3M1X;DP=4278;DPB=4277.8;DPRA=0.774487;EPP=671.824;EPPR=8545.58;GTI=0;LEN=1;MEANALT=5.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=12051;QR=151871;RO=3934;RPL=0;RPP=671.824;RPPR=8545.58;RPR=308;RUN=1;SAF=308;SAP=671.824;SAR=0;SRF=3934;SRP=8545.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:519:481,36:481:18441:36:1419:0,-28.0312,-1530.61 0|1:831:730,93:730:28209:93:3621:-77.8986,0,-2288.77 0|0:346:316,28:316:12275:28:1091:0,-5.31471,-1005.6 0|1:727:642,76:642:24813:76:3003:-53.952,0,-2015.02 0|0:878:873,0:873:33636:0:0:0,-262.799,-3024.46 0|0:977:892,75:892:34497:75:2917:0,-28.7374,-2839.47 dDocent_Contig_5601 107 . N T 78.8053 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=79;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:72:-6.83672,-0.60206,0 dDocent_Contig_5602 12 . T C 1815.18 . AB=0.0398551;ABP=510.6;AC=0;AF=0;AN=12;AO=11;CIGAR=1X2M1X2M1X;DP=451;DPB=451;DPRA=0.793103;EPP=26.8965;EPPR=715.253;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.909091;PAIREDR=0.554878;PAO=0;PQA=0;PQR=0;PRO=0;QA=434;QR=12790;RO=328;RPL=0;RPP=26.8965;RPPR=715.253;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=328;SRP=715.253;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:55:38,1,14,2:38:1495:1,14,2:40,545,76:-33.3559,-41.4993,-164.183,0,-119.692,-118.773,-38.5633,-158.252,-116.755,-160.945 0|0:76:54,4,16,0:54:2099:4,16,0:157,619,0:-34.6062,-37.9471,-209.226,0,-159.583,-167.679,-50.8618,-210.43,-172.495,-223.342 0|0:62:38,2,21,0:38:1488:2,21,0:80,783,0:-52.6392,-57.4859,-179.246,0,-115.756,-116.025,-64.0783,-179.848,-122.346,-186.439 0|0:87:80,0,7,0:80:3113:0,7,0:0,272,0:0,-24.0824,-279.908,-1.34238,-257.556,-255.449,-24.0824,-279.908,-257.556,-279.908 0|0:83:57,4,8,13:57:2226:4,8,13:157,292,483:-22.3661,-26.6089,-208.411,-15.6754,-185.764,-196.269,0,-170.091,-159.153,-179.09 0|0:88:61,0,5,22:61:2369:0,5,22:0,188,809:-47.7721,-66.1349,-260.798,-50.7304,-245.395,-243.89,0,-194.661,-179.259,-188.038 dDocent_Contig_5603 38 . A G 2027.36 . AB=0.266667;ABP=151.973;AC=2;AF=0.166667;AN=12;AO=98;CIGAR=1X;DP=700;DPB=700;DPRA=1.12075;EPP=215.815;EPPR=1158.57;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.931894;PAO=0;PQA=0;PQR=0;PRO=0;QA=3904;QR=23370;RO=602;RPL=0;RPP=215.815;RPPR=1310.24;RPR=98;RUN=1;SAF=98;SAP=215.815;SAR=0;SRF=584;SRP=1158.57;SRR=18;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:64:61,3:61:2387:3:120:0,-8.07861,-203.825 0/0:52:49,3:49:1922:3:122:0,-4.28107,-161.825 0/0:106:106,0:106:4126:0:0:0,-31.9092,-371.358 0/1:83:70,13:70:2726:13:518:-21.981,0,-220.487 0/0:163:155,8:155:5974:8:325:0,-19.4483,-507.904 0/1:232:161,71:161:6235:71:2819:-183.977,0,-491.157 dDocent_Contig_5604 98 . N G 175.029 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=8.76405;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=191;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:6:0,6:0:0:6:191:-17.5028,-1.80618,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5605 20 . T C 69792.4 . AB=0.0534442;ABP=7295.03;AC=6;AF=0.5;AN=12;AO=225;CIGAR=2X;DP=5210;DPB=5210;DPRA=0;EPP=491.592;EPPR=5527.24;GTI=0;LEN=1;MEANALT=3.2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=4.44089e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8641;QR=96900;RO=2544;RPL=0;RPP=491.592;RPPR=5527.24;RPR=225;RUN=1;SAF=225;SAP=491.592;SAR=0;SRF=2544;SRP=5527.24;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:693:314,335,43:314:12007:335,43:12907,1631:-965.207,0,-884.365,-926.009,-851.489,-1898.27 0|1:871:409,378,82:409:15566:378,82:14637,3162:-1079.2,0,-1162.88,-942.689,-1017.04,-2194.67 0|1:787:313,403,70:313:11987:403,70:15715,2687:-1197.45,0,-862.387,-1071.14,-763.171,-2033.77 0|1:864:319,527,16:319:12028:527,16:20471,610:-1586,0,-827.004,-1631.99,-935.61,-2612.81 0|1:1000:584,414,0:584:22264:414,0:16034,0:-1141.29,0,-1701.71,-1317.1,-1826.33,-3143.42 0|1:995:605,376,14:605:23048:376,14:14643,551:-1021.31,0,-1777.29,-1158.11,-1845.15,-3044.37 dDocent_Contig_5606 35 . T C 190.626 . AB=0.188679;ABP=47.6279;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=286;DPB=286;DPRA=1.13734;EPP=24.725;EPPR=600.165;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.92;PAO=0;PQA=0;PQR=0;PRO=0;QA=402;QR=10267;RO=275;RPL=0;RPP=24.725;RPPR=600.165;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=275;SRP=600.165;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1013:0:0:0,-8.42884,-91.4709 0/0:65:65,0:65:2463:0:0:0,-19.5669,-221.881 0/0:19:19,0:19:707:0:0:0,-5.71957,-63.954 0/0:57:56,0:56:2075:0:0:0,-16.8577,-186.9 0/0:64:64,0:64:2388:0:0:0,-19.2659,-215.137 0/1:53:43,10:43:1621:10:402:-20.5855,0,-130.202 dDocent_Contig_5608 98 . N C 127.327 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1M1I1M7X1I3X;DP=4;DPB=4.83333;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=131;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:3:0,3:0:0:3:100:-9.33066,-0.90309,0 1|1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_5609 25 . T C 32.743 . AB=0.15;ABP=24.2907;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=182;DPB=182;DPRA=0.545455;EPP=11.6962;EPPR=363.914;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.7303;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.865169;PAO=0;PQA=0;PQR=0;PRO=0;QA=155;QR=6859;RO=178;RPL=0;RPP=11.6962;RPPR=389.532;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=175;SRP=363.914;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:18,1:18:704:1:39:0,-1.82301,-59.7961 0/0:50:50,0:50:1909:0:0:0,-15.0515,-172.045 0/1:20:17,3:17:648:3:116:-4.79694,0,-52.5394 0/0:29:29,0:29:1128:0:0:0,-8.72987,-101.762 0/0:29:29,0:29:1111:0:0:0,-8.72987,-100.286 0/0:35:35,0:35:1359:0:0:0,-10.536,-122.59 dDocent_Contig_5610 38 . A C 36795.4 . AB=0.0505762;ABP=2743.37;AC=0;AF=0;AN=12;AO=79;CIGAR=1X1M1X;DP=3321;DPB=3321;DPRA=0;EPP=174.557;EPPR=3724.91;GTI=0;LEN=1;MEANALT=4.33333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3131;QR=67012;RO=1714;RPL=0;RPP=174.557;RPPR=3724.91;RPR=79;RUN=1;SAF=79;SAP=174.557;SAR=0;SRF=1714;SRP=3724.91;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:488:183,28,253,24:183:7128:28,253,24:1101,9974,957:-765.4,-729.936,-1307.29,0,-495.226,-509.619,-741.678,-1236.91,-506.968,-1320.24 0|0:570:230,26,234,79:230:8986:26,234,79:1042,9293,3121:-695.748,-679.137,-1409.99,0,-652.834,-668.241,-508.196,-1161.03,-481.892,-1223.1 0|0:504:163,25,256,57:163:6383:25,256,57:988,10204,2281:-791.184,-758.95,-1276.24,0,-443.516,-447.755,-652.361,-1095.88,-336.926,-1160.02 0|0:590:181,0,342,67:181:7033:0,342,67:0,13585,2593:-1063.85,-1118.34,-1696.2,0,-577.871,-474.919,-905.394,-1483.26,-364.928,-1463.09 0|0:523:407,0,115,0:407:15976:0,115,0:0,4558,0:-252.68,-375.199,-1689.03,0,-1313.88,-1279.26,-375.199,-1689.03,-1313.88,-1689.03 0|0:646:550,0,88,5:550:21506:0,88,5:0,3492,197:-121.9,-287.467,-2055.44,0,-1767.99,-1741.5,-271.26,-2039.23,-1751.78,-2037.72 dDocent_Contig_5611 209 . N G 188.985 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=198;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:116:-10.817,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5612 71 . C A 3388.87 . AB=0.0714286;ABP=137.021;AC=4;AF=0.333333;AN=12;AO=6;CIGAR=18M1X2M;DP=453;DPB=424.762;DPRA=1.344;EPP=16.0391;EPPR=566.2;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.802867;PAO=0;PQA=0;PQR=0;PRO=0;QA=213;QR=10072;RO=279;RPL=3;RPP=3.0103;RPPR=6.44263;RPR=3;RUN=1;SAF=3;SAP=3.0103;SAR=3;SRF=145;SRP=3.95205;SRR=134;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:76:65,8,0,0:65:2319:8,0,0:279,0,0:-3.09309,0,-186.593,-22.66,-189.002,-211.69,-22.66,-189.002,-211.69,-211.69 0|1:84:68,10,0,6:68:2430:10,0,6:354,0,213:-8.36378,0,-195.102,-28.8338,-198.112,-226.946,-11.4781,-180.757,-209.591,-207.785 0|0:53:44,4,0,0:44:1602:4,0,0:146,0,0:0,-1.25777,-131.019,-13.2453,-132.223,-144.153,-13.2453,-132.223,-144.153,-144.153 0|0:72:65,2,0,0:65:2363:2,0,0:74,0,0:0,-13.5184,-205.87,-19.5669,-206.472,-212.525,-19.5669,-206.472,-212.525,-212.525 0|1:75:14,59,0,0:14:517:59,0,0:2061,0,0:-163.411,0,-24.5415,-167.625,-42.3023,-209.915,-167.625,-42.3023,-209.915,-209.915 0|1:93:23,62,8,0:23:841:62,8,0:2188,270,0:-171.235,0,-50.0782,-156.277,-46.8659,-222.593,-178.159,-68.7421,-225.002,-246.883 dDocent_Contig_5613 24 . T A 11965.1 . AB=0.271186;ABP=807.927;AC=6;AF=0.5;AN=12;AO=480;CIGAR=4M1X;DP=1770;DPB=1958.8;DPRA=0;EPP=1045.32;EPPR=2530.6;GTI=0;LEN=1;MEANALT=3.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.997917;PAIREDR=0.997423;PAO=0;PQA=0;PQR=0;PRO=0;QA=18935;QR=45192;RO=1164;RPL=0;RPP=1045.32;RPPR=2530.6;RPR=480;RUN=1;SAF=480;SAP=1045.32;SAR=0;SRF=1164;SRP=2530.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:231:127,15,88:127:4929:15,88:530,3438:-244.407,-239.488,-639.941,0,-361.846,-378.507 0|1:227:135,14,78:135:5218:14,78:496,3088:-213.533,-214.326,-638.646,0,-388.724,-405.094 0|1:112:61,7,44:61:2359:7,44:241,1745:-125.309,-124.113,-315.744,0,-174.221,-180.537 0|1:258:112,62,82:112:4361:62,82:2268,3208:-230.026,-78.4539,-418.185,0,-173.122,-333.727 0|1:533:384,0,146:384:14876:0,146:0,5801:-362.123,-477.718,-1699.72,0,-1222.17,-1178.22 0|1:409:345,20,42:345:13449:20,42:667,1655:-32.3354,-82.7614,-1182.15,0,-1052.03,-1092.83 dDocent_Contig_5614 47 . G A 16329.8 . AB=0.203399;ABP=2970.85;AC=6;AF=0.5;AN=12;AO=790;CIGAR=1X;DP=3884;DPB=3884;DPRA=0;EPP=1709.8;EPPR=4821.67;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=31261;QR=121912;RO=3091;RPL=1;RPP=1709.8;RPPR=4821.67;RPR=789;RUN=1;SAF=790;SAP=1718.47;SAR=0;SRF=3091;SRP=6715.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:459:416,43:416:16385:43:1698:-14.8738,0,-1335.28 0/1:602:488,114:488:19222:114:4491:-222.924,0,-1547.23 0/1:571:503,68:503:19868:68:2686:-69.9834,0,-1614.64 0/1:638:567,68:567:22400:68:2681:-50.0058,0,-1822.76 0/1:752:559,193:559:22074:193:7597:-457.008,0,-1758.47 0/1:862:558,304:558:21963:304:12108:-829.409,0,-1715.39 dDocent_Contig_5615 10 . G T 56.1731 . AB=0.153846;ABP=30.0702;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=224;DPB=224;DPRA=0.909091;EPP=18.2106;EPPR=474.22;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.6313;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.884793;PAO=0;PQA=0;PQR=0;PRO=0;QA=284;QR=8558;RO=217;RPL=0;RPP=18.2106;RPPR=474.22;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=217;SRP=474.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:41,3:41:1614:3:122:0,-1.87283,-133.85 0/0:37:37,0:37:1457:0:0:0,-11.1381,-131.386 0/1:26:22,4:22:873:4:162:-7.14018,0,-71.0503 0/0:33:33,0:33:1316:0:0:0,-9.93399,-118.71 0/0:33:33,0:33:1287:0:0:0,-9.93399,-116.096 0/0:51:51,0:51:2011:0:0:0,-15.3525,-180.155 dDocent_Contig_5616 17 . G A 20812.5 . AB=0.497659;ABP=3.08147;AC=6;AF=0.5;AN=12;AO=744;CIGAR=1M1I6M1X5M;DP=1495;DPB=1552.69;DPRA=0;EPP=1618.59;EPPR=1612.07;GTI=0;LEN=1;MEANALT=2.66667;MQM=59.9973;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997312;PAIREDR=0.99865;PAO=0;PQA=0;PQR=0;PRO=0;QA=28235;QR=28870;RO=741;RPL=0;RPP=1618.59;RPPR=1612.07;RPR=744;RUN=1;SAF=744;SAP=1618.59;SAR=0;SRF=741;SRP=1612.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:183:69,113:69:2683:113:4368:-337.969,0,-186.459 0|1:265:107,158:107:4199:158:5965:-456.96,0,-298.159 0|1:243:125,117:125:4865:117:4429:-325.502,0,-364.7 0|1:339:109,227:109:4221:227:8630:-674.824,0,-278.402 0|1:247:201,45:201:7823:45:1708:-79.7132,0,-629.549 0|1:218:130,84:130:5079:84:3135:-217.503,0,-392.294 dDocent_Contig_5617 21 . T C 951.614 . AB=0.110879;ABP=1260.32;AC=2;AF=0.166667;AN=12;AO=106;CIGAR=1X;DP=2213;DPB=2213;DPRA=1.52108;EPP=233.186;EPPR=4576.13;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999525;PAO=0;PQA=0;PQR=0;PRO=0;QA=4287;QR=78894;RO=2106;RPL=0;RPP=233.186;RPPR=4576.13;RPR=106;RUN=1;SAF=106;SAP=233.186;SAR=0;SRF=2106;SRP=4576.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:250:250,0:250:9328:0:0:0,-75.2575,-839.257 0/0:380:379,0:379:14178:0:0:0,-114.09,-1275.03 0/0:288:288,0:288:10735:0:0:0,-86.6966,-965.785 0/0:339:339,0:339:12740:0:0:0,-102.049,-1146.08 0/1:489:426,63:426:15930:63:2557:-83.048,0,-1285.77 0/1:467:424,43:424:15983:43:1730:-15.3353,0,-1297.13 dDocent_Contig_5618 62 . A T 188.071 . AB=0.222222;ABP=63.329;AC=2;AF=0.166667;AN=12;AO=29;CIGAR=1X;DP=272;DPB=272;DPRA=0.706667;EPP=65.983;EPPR=530.678;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995885;PAO=0;PQA=0;PQR=0;PRO=0;QA=798;QR=8922;RO=243;RPL=29;RPP=65.983;RPPR=530.678;RPR=0;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=243;SRP=530.678;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:28,2:28:1000:2:64:0,-2.95235,-84.234 0/1:51:39,12:39:1352:12:351:-16.5247,0,-106.617 0/1:39:31,8:31:1173:8:189:-5.50424,0,-94.1275 0/0:60:54,6:54:2005:6:166:0,-2.84674,-165.474 0/0:60:60,0:60:2231:0:0:0,-18.0618,-201.018 0/0:32:31,1:31:1161:1:28:0,-6.83323,-101.988 dDocent_Contig_5619 106 . N A 1268.47 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=41;CIGAR=2X;DP=41;DPB=41;DPRA=0;EPP=92.0407;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1399;QR=0;RO=0;RPL=0;RPP=92.0407;RPPR=0;RPR=41;RUN=1;SAF=0;SAP=92.0407;SAR=41;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:12:0,12:0:0:12:407:-36.9569,-3.61236,0 .:.:.:.:.:.:.:. 1|1:29:0,29:0:0:29:992:-89.5896,-8.72987,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_5620 8 . G T 1177.05 . AB=0.158513;ABP=520.598;AC=4;AF=0.333333;AN=12;AO=83;CIGAR=1X;DP=685;DPB=685;DPRA=1.08037;EPP=183.243;EPPR=1305.89;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993333;PAO=0;PQA=0;PQR=0;PRO=0;QA=3157;QR=22939;RO=600;RPL=0;RPP=183.243;RPPR=1305.89;RPR=83;RUN=1;SAF=83;SAP=183.243;SAR=0;SRF=600;SRP=1305.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:79:64,15:64:2429:15:574:-28.2189,0,-195.035 0/1:137:111,26:111:4226:26:962:-45.6434,0,-339.183 0/1:181:154,27:154:5905:27:1038:-39.2413,0,-476.918 0/1:114:99,13:99:3794:13:506:-11.8233,0,-307.51 0/0:107:107,0:107:4081:0:0:0,-32.2102,-367.373 0/0:67:65,2:65:2504:2:77:0,-12.8599,-218.251 dDocent_Contig_5621 136 . C T 84.5428 . AB=0.185185;ABP=26.2531;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=209;DPB=209;DPRA=0.732026;EPP=18.2106;EPPR=441.648;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9604;NS=6;NUMALT=1;ODDS=0;PAIRED=0.571429;PAIREDR=0.792079;PAO=0;PQA=0;PQR=0;PRO=0;QA=278;QR=8060;RO=202;RPL=7;RPP=18.2106;RPPR=441.648;RPR=0;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=441.648;SRR=202;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:670:0:0:0,-5.41854,-60.6048 0/1:27:22,5:22:857:5:197:-9.9771,0,-69.3037 0/0:29:27,2:27:1097:2:81:0,-1.04414,-91.3269 0/0:47:47,0:47:1880:0:0:0,-14.1484,-169.403 0/0:38:38,0:38:1535:0:0:0,-11.4391,-138.385 0/0:50:50,0:50:2021:0:0:0,-15.0515,-182.072 dDocent_Contig_5622 76 . C T 105.636 . AB=0.384615;ABP=4.51363;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=223;DPB=223;DPRA=0.753086;EPP=20.3821;EPPR=469.877;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0.75814;PAO=0;PQA=0;PQR=0;PRO=0;QA=285;QR=7673;RO=215;RPL=8;RPP=20.3821;RPPR=469.877;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=215;SRP=469.877;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1446:0:0:0,-12.3422,-130.435 0/0:53:53,0:53:1873:0:0:0,-15.9546,-168.85 0/0:38:38,0:38:1371:0:0:0,-11.4391,-123.686 0/0:48:45,3:45:1622:3:111:0,-4.09552,-135.909 0/1:13:8,5:8:265:5:174:-12.0865,0,-20.2556 0/0:30:30,0:30:1096:0:0:0,-9.0309,-98.9506 dDocent_Contig_5623 29 . C A 2935.04 . AB=0.180068;ABP=788.048;AC=5;AF=0.416667;AN=12;AO=165;CIGAR=1X;DP=1078;DPB=1078;DPRA=0;EPP=361.303;EPPR=1985.56;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998905;PAO=0;PQA=0;PQR=0;PRO=0;QA=6531;QR=36272;RO=913;RPL=0;RPP=361.303;RPPR=1985.56;RPR=165;RUN=1;SAF=165;SAP=361.303;SAR=0;SRF=913;SRP=1985.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:201:182,19:182:7205:19:758:-8.03494,0,-587.601 0/1:137:116,21:116:4558:21:838:-34.492,0,-368.912 0/1:291:226,65:226:9055:65:2557:-142.673,0,-726.796 0/0:195:189,6:189:7501:6:229:0,-37.7332,-653.758 0/1:86:61,25:61:2449:25:1002:-64.5849,0,-194.669 0/1:168:139,29:139:5504:29:1147:-52.9408,0,-444.629 dDocent_Contig_5624 61 . C T 1628.85 . AB=0.278626;ABP=114.534;AC=6;AF=0.5;AN=12;AO=73;CIGAR=1X;DP=262;DPB=262;DPRA=0;EPP=161.528;EPPR=413.419;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.917808;PAIREDR=0.89418;PAO=0;PQA=0;PQR=0;PRO=0;QA=2788;QR=7344;RO=189;RPL=73;RPP=161.528;RPPR=413.419;RPR=0;RUN=1;SAF=73;SAP=161.528;SAR=0;SRF=189;SRP=413.419;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:46:32,14:32:1221:14:535:-34.6405,0,-96.3156 0/1:52:41,11:41:1616:11:403:-20.9541,0,-130.023 0/1:56:43,13:43:1687:13:488:-27.397,0,-135.197 0/1:30:20,10:20:796:10:379:-25.428,0,-62.927 0/1:40:33,7:33:1287:7:278:-13.348,0,-104.05 0/1:38:20,18:20:737:18:705:-52.3396,0,-55.1881 dDocent_Contig_5625 31 . A T 846.411 . AB=0.125;ABP=442.733;AC=2;AF=0.166667;AN=12;AO=52;CIGAR=2M1X8M;DP=513;DPB=510.091;DPRA=0;EPP=115.927;EPPR=845.542;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=5.55112e-17;PAIRED=0.923077;PAIREDR=0.956186;PAO=0;PQA=0;PQR=0;PRO=0;QA=2028;QR=15231;RO=388;RPL=0;RPP=115.927;RPPR=845.542;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=388;SRP=845.542;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:50:46,0,1,3:46:1790:0,1,3:0,40,109:0,-13.8474,-160.962,-10.5431,-157.666,-157.365,-4.9779,-152.066,-148.771,-151.163 0|1:100:80,0,8,12:80:3125:0,8,12:0,324,479:-15.3639,-39.4463,-296.335,-12.7275,-269.618,-267.209,0,-256.884,-230.167,-253.272 0|1:71:44,4,5,18:44:1732:4,5,18:162,200,712:-45.3421,-45.2279,-186.503,-42.1117,-171.231,-183.085,0,-129.114,-125.998,-137.055 0|0:102:64,9,11,11:64:2519:9,11,11:365,444,409:-17.3426,-6.50128,-211.024,0,-177.13,-203.922,-3.15765,-180.279,-173.779,-207.07 0|0:103:91,8,0,4:91:3573:8,0,4:311,0,163:0,-1.85182,-293.287,-27.3937,-295.695,-321.249,-13.9402,-282.248,-307.802,-306.597 0|0:87:63,10,9,4:63:2492:10,9,4:398,358,156:-13.8142,0,-202.093,-3.29457,-175.627,-205.687,-19.9574,-192.283,-195.576,-223.849 dDocent_Contig_5626 98 . N C 30703.9 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=1045;CIGAR=1X;DP=1045;DPB=1045;DPRA=0;EPP=2272.2;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=34095;QR=0;RO=0;RPL=1045;RPP=2272.2;RPPR=0;RPR=0;RUN=1;SAF=1045;SAP=2272.2;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:258:0,258:0:0:258:8334:-750.162,-77.6657,0 1/1:300:0,300:0:0:300:9721:-874.967,-90.309,0 1/1:185:0,185:0:0:185:6089:-548.176,-55.6906,0 1/1:235:0,235:0:0:235:7725:-695.372,-70.7421,0 1/1:48:0,48:0:0:48:1609:-145.098,-14.4494,0 1/1:19:0,19:0:0:19:617:-55.8379,-5.71957,0 dDocent_Contig_5629 135 . A G 531.15 . AB=0.191011;ABP=150.622;AC=2;AF=0.166667;AN=12;AO=34;CIGAR=1X;DP=549;DPB=549;DPRA=0.959569;EPP=76.8404;EPPR=1119.15;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1214;QR=18248;RO=514;RPL=0;RPP=76.8404;RPPR=1119.15;RPR=34;RUN=1;SAF=0;SAP=76.8404;SAR=34;SRF=0;SRP=1119.15;SRR=514;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:58,0:58:2088:0:0:0,-17.4597,-188.031 0/0:113:113,0:113:4056:0:0:0,-34.0164,-365.212 0/0:134:134,0:134:4697:0:0:0,-40.338,-422.866 0/0:65:65,0:65:2304:0:0:0,-19.5669,-207.612 0/1:94:82,12:82:2902:12:436:-11.2851,0,-233.107 0/1:84:62,22:62:2201:22:778:-45.0518,0,-173.059 dDocent_Contig_5630 27 . C T 1187.87 . AB=0.140669;ABP=808.258;AC=1;AF=0.0833333;AN=12;AO=151;CIGAR=1X;DP=3895;DPB=3895;DPRA=1.03065;EPP=330.903;EPPR=8126.49;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999465;PAO=0;PQA=0;PQR=0;PRO=0;QA=5594;QR=148189;RO=3741;RPL=0;RPP=330.903;RPPR=8126.49;RPR=151;RUN=1;SAF=151;SAP=330.903;SAR=0;SRF=3741;SRP=8126.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:543:540,3:540:21259:3:110:0,-153.199,-1901.3 0/0:739:706,33:706:27976:33:1205:0,-113.729,-2406.63 0/0:370:359,10:359:14198:10:385:0,-76.1997,-1241.79 0/1:718:617,101:617:24390:101:3737:-120.31,0,-1976.91 0/0:633:632,0:632:25119:0:0:0,-190.251,-2258.44 0/0:892:887,4:887:35247:4:157:0,-253.915,-3154.56 dDocent_Contig_5631 45 . T C 75500 . AB=0.827829;ABP=2122.96;AC=7;AF=0.583333;AN=12;AO=2360;CIGAR=1X;DP=2773;DPB=2773;DPRA=0;EPP=5127.69;EPPR=891.143;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999576;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=92491;QR=16046;RO=409;RPL=0;RPP=5127.69;RPPR=891.143;RPR=2360;RUN=1;SAF=2360;SAP=5127.69;SAR=0;SRF=409;SRP=891.143;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:330:78,252:78:3055:252:9785:-780.793,0,-175.704 0/1:452:78,374:78:3018:374:14566:-1173.91,0,-135.646 0/1:433:119,314:119:4707:314:12365:-981.69,0,-293.213 0/1:509:59,450:59:2303:450:17726:-1440.79,0,-54.2215 1/1:502:21,480:21:836:480:18874:-1621.69,-75.4622,0 0/1:547:54,490:54:2127:490:19175:-1560.36,0,-27.6648 dDocent_Contig_5633 209 . N G 75.9287 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=80;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:80:-7.59179,-0.60206,0 dDocent_Contig_5634 26 . C A 199.819 . AB=0.0962672;ABP=723.653;AC=1;AF=0.0833333;AN=12;AO=109;CIGAR=1X;DP=2517;DPB=2517;DPRA=0;EPP=239.701;EPPR=5229.74;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997923;PAO=0;PQA=0;PQR=0;PRO=0;QA=4353;QR=96352;RO=2407;RPL=0;RPP=239.701;RPPR=5229.74;RPR=109;RUN=1;SAF=109;SAP=239.701;SAR=0;SRF=2407;SRP=5229.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:509:459,49:459:18443:49:1937:-21.2038,0,-1504.97 0/0:644:618,26:618:24720:26:1041:0,-99.8837,-2128.61 0/0:523:511,12:511:20470:12:488:0,-113.168,-1796.24 0/0:481:463,18:463:18526:18:735:0,-78.3226,-1599.31 0/0:146:145,1:145:5777:1:32:0,-40.7511,-516.526 0/0:214:211,3:211:8416:3:120:0,-53.2331,-745.79 dDocent_Contig_5635 33 . A G 1779.66 . AB=0.228814;ABP=229.138;AC=3;AF=0.25;AN=12;AO=96;CIGAR=1X;DP=695;DPB=695;DPRA=0;EPP=211.472;EPPR=1301.55;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.927083;PAIREDR=0.849498;PAO=0;PQA=0;PQR=0;PRO=0;QA=3792;QR=23597;RO=598;RPL=0;RPP=211.472;RPPR=1301.55;RPR=96;RUN=1;SAF=96;SAP=211.472;SAR=0;SRF=598;SRP=1301.55;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:77:72,5:72:2828:5:188:0,-5.9034,-237.367 0/0:125:119,6:119:4683:6:241:0,-15.5621,-399.342 0/1:125:110,14:110:4345:14:558:-12.8262,0,-353.282 0/0:139:135,4:135:5316:4:152:0,-27.7976,-464.279 0/1:87:73,14:73:2871:14:561:-24.6439,0,-232.315 0/1:142:89,53:89:3554:53:2092:-145.718,0,-277.153 dDocent_Contig_5636 18 . G A 2091.26 . AB=0.143333;ABP=997.458;AC=1;AF=0.0833333;AN=12;AO=190;CIGAR=1X1M1I7M;DP=4371;DPB=4391.89;DPRA=1.34302;EPP=415.59;EPPR=8784.44;GTI=0;LEN=1;MEANALT=11;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7542;QR=155855;RO=4044;RPL=0;RPP=415.59;RPPR=8784.44;RPR=190;RUN=1;SAF=190;SAP=415.59;SAR=0;SRF=4044;SRP=8784.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:584:573,0,0:573:22086:0,0:0,0:0,-172.49,-1986.14,-172.49,-1986.14,-1986.14 0|0:711:702,0,0:702:27063:0,0:0,0:0,-211.323,-2433.65,-211.323,-2433.65,-2433.65 0|0:627:617,0,1:617:23772:0,1:0,34:0,-185.735,-2137.67,-182.974,-2134.91,-2134.61 0|0:693:679,0,1:679:26212:0,1:0,39:0,-204.399,-2357.17,-201.179,-2353.96,-2353.66 0|0:856:769,61,12:769:29608:61,12:2410,417:0,-33.1035,-2445.73,-197.597,-2430.19,-2624.89 0|1:900:704,129,56:704:27114:129,56:5132,2055:-210.649,0,-2187.39,-254.605,-2058.25,-2463.93 dDocent_Contig_5637 28 . C T 70778.5 . AB=0.0482529;ABP=2133.65;AC=0;AF=0;AN=12;AO=58;CIGAR=2X;DP=2502;DPB=2502;DPRA=0.733822;EPP=128.956;EPPR=634.909;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.996564;PAO=0;PQA=0;PQR=0;PRO=0;QA=2294;QR=11532;RO=291;RPL=0;RPP=128.956;RPPR=634.909;RPR=58;RUN=1;SAF=58;SAP=128.956;SAR=0;SRF=291;SRP=634.909;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:344:57,25,262:57:2256:25,262:988,10422:-840.855,-776.714,-954.845,0,-104.358,-106.788 0|0:453:66,1,386:66:2612:1,386:40,15297:-1239.11,-1255.68,-1470.33,0,-211.659,-98.7561 0|0:208:39,0,169:39:1553:0,169:0,6705:-540.548,-552.288,-680.163,0,-128.272,-77.398 0|0:405:81,32,292:81:3179:32,292:1266,11607:-931.157,-851.361,-1103.14,0,-157.232,-173.511 0|0:572:22,0,550:22:891:0,550:0,21713:-1871.9,-1878.52,-1951.99,-91.6925,-165.567,0 0|0:520:26,0,494:26:1041:0,494:0,19523:-1661.51,-1669.33,-1755.09,-62.5509,-148.709,0 dDocent_Contig_5638 20 . A G 18746.4 . AB=0.347933;ABP=411.149;AC=2;AF=0.166667;AN=12;AO=709;CIGAR=1X;DP=5190;DPB=5190;DPRA=1.03732;EPP=1542.58;EPPR=9726.86;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=27734;QR=176374;RO=4478;RPL=0;RPP=1542.58;RPPR=9726.86;RPR=709;RUN=1;SAF=709;SAP=1542.58;SAR=0;SRF=4478;SRP=9726.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:803:802,0:802:31607:0:0:0,-241.426,-2841.85 0/0:899:898,1:898:35358:1:10:0,-269.626,-3178.2 0/0:571:569,1:569:22351:1:41:0,-167.807,-2005.81 0/0:885:884,0:884:34728:0:0:0,-266.111,-3122.29 0/1:1029:679,350:679:26819:350:13756:-927.316,0,-2101.7 0/1:1003:646,357:646:25511:357:13927:-950.542,0,-1991.95 dDocent_Contig_5639 49 . T A 840.112 . AB=0.183673;ABP=215.948;AC=2;AF=0.166667;AN=12;AO=48;CIGAR=1X;DP=576;DPB=576;DPRA=1.27668;EPP=107.241;EPPR=1138.71;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1901;QR=20777;RO=527;RPL=0;RPP=107.241;RPPR=1138.71;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=527;SRP=1147.38;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:72:58,14:58:2244:14:543:-27.5316,0,-180.465 0/0:78:75,3:75:2984:3:119:0,-12.3853,-257.564 0/1:173:142,31:142:5609:31:1239:-59.7015,0,-452.563 0/0:96:95,0:95:3754:0:0:0,-28.5978,-337.555 0/0:74:74,0:74:2934:0:0:0,-22.2762,-264.168 0/0:83:83,0:83:3252:0:0:0,-24.9855,-292.75 dDocent_Contig_5640 94 . A C 108.981 . AB=0.225806;ABP=23.254;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X2M1X;DP=123;DPB=123;DPRA=1.68478;EPP=18.2106;EPPR=252.73;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=238;QR=3727;RO=115;RPL=7;RPP=18.2106;RPPR=252.73;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=115;SRP=252.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:7:7,0:7:218:0:0:0,-2.10721,-19.9271 0|0:29:29,0:29:942:0:0:0,-8.72987,-85.0832 0|0:11:11,0:11:352:0:0:0,-3.31133,-31.9916 0|1:31:24,7:24:793:7:238:-12.421,0,-62.3487 0|0:24:23,0:23:738:0:0:0,-6.92369,-66.3759 0|0:21:21,0:21:684:0:0:0,-6.32163,-61.8697 dDocent_Contig_5641 33 . C A 171687 . AB=0.852355;ABP=3574.63;AC=8;AF=0.666667;AN=12;AO=5170;CIGAR=1X;DP=5750;DPB=5750;DPRA=0;EPP=11229.5;EPPR=1260.29;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999613;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=205711;QR=22922;RO=579;RPL=0;RPP=11229.5;RPPR=1260.29;RPR=5170;RUN=1;SAF=5170;SAP=11229.5;SAR=0;SRF=579;SRP=1260.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:835:122,713:122:4805:713:28416:-2303.53,0,-181.004 0/1:980:136,844:136:5375:844:33565:-2722.8,0,-188.597 0/1:640:75,565:75:2964:565:22498:-1830.24,0,-74.1939 0/1:857:155,701:155:6200:701:27887:-2249.48,0,-299.896 1/1:1157:22,1135:22:887:1135:45090:-3973.76,-268.155,0 1/1:1281:69,1212:69:2691:1212:48255:-4096.06,-143.308,0 dDocent_Contig_5642 55 . T A 323.387 . AB=0.166667;ABP=113.032;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=1X;DP=489;DPB=489;DPRA=1.25346;EPP=57.2971;EPPR=1010.57;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.907328;PAO=0;PQA=0;PQR=0;PRO=0;QA=997;QR=18397;RO=464;RPL=25;RPP=57.2971;RPPR=1010.57;RPR=0;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=464;SRP=1010.57;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:63:63,0:63:2498:0:0:0,-18.9649,-224.967 0/1:114:95,19:95:3752:19:754:-33.8616,0,-303.374 0/0:64:61,3:61:2422:3:123:0,-7.80113,-206.667 0/0:94:91,3:91:3611:3:120:0,-17.1095,-313.833 0/0:62:62,0:62:2468:0:0:0,-18.6639,-222.268 0/0:92:92,0:92:3646:0:0:0,-27.6948,-328.161 dDocent_Contig_5643 88 . A G 1597.8 . AB=0.249275;ABP=191.387;AC=1;AF=0.0833333;AN=12;AO=110;CIGAR=1X;DP=1590;DPB=1590;DPRA=1.14256;EPP=241.872;EPPR=3212.45;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999323;PAO=0;PQA=0;PQR=0;PRO=0;QA=3774;QR=50494;RO=1478;RPL=110;RPP=241.872;RPPR=3212.45;RPR=0;RUN=1;SAF=110;SAP=241.872;SAR=0;SRF=1478;SRP=3212.45;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:182:168,14:168:5685:14:482:0,-11.0787,-468.1 0/0:114:114,0:114:3859:0:0:0,-34.3174,-347.526 0/0:197:188,9:188:6588:9:313:0,-30.7959,-564.518 0/1:345:258,86:258:8770:86:2944:-161.303,0,-685.456 0/0:382:381,1:381:12988:1:35:0,-111.495,-1165.34 0/0:370:369,0:369:12604:0:0:0,-111.08,-1134.04 dDocent_Contig_5644 19 . T C 108.067 . AB=0.111111;ABP=192.17;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=413;DPB=413;DPRA=1.80952;EPP=46.4397;EPPR=856.399;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=779;QR=15130;RO=393;RPL=0;RPP=46.4397;RPPR=856.399;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=393;SRP=856.399;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:66:65,1:65:2472:1:41:0,-15.7734,-218.578 0/0:47:47,0:47:1796:0:0:0,-14.1484,-161.878 0/1:144:128,16:128:4969:16:615:-12.3296,0,-403.789 0/0:56:53,3:53:1988:3:123:0,-5.39289,-167.662 0/0:57:57,0:57:2212:0:0:0,-17.1587,-199.27 0/0:43:43,0:43:1693:0:0:0,-12.9443,-152.604 dDocent_Contig_5645 8 . G T 1035.69 . AB=0.222707;ABP=155.952;AC=1;AF=0.0833333;AN=12;AO=82;CIGAR=1X;DP=1273;DPB=1273;DPRA=1.55622;EPP=181.071;EPPR=2589.23;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99916;PAO=0;PQA=0;PQR=0;PRO=0;QA=3121;QR=45489;RO=1191;RPL=0;RPP=181.071;RPPR=2589.23;RPR=82;RUN=1;SAF=82;SAP=181.071;SAR=0;SRF=1191;SRP=2589.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:118:118,0:118:4497:0:0:0,-35.5215,-404.792 0/0:162:162,0:162:6210:0:0:0,-48.7669,-558.83 0/0:218:218,0:218:8362:0:0:0,-65.6245,-752.352 0/0:194:185,9:185:7054:9:345:0,-26.9919,-603.332 0/0:352:330,22:330:12606:22:845:0,-29.59,-1057.64 0/1:229:178,51:178:6760:51:1931:-105.092,0,-539.359 dDocent_Contig_5646 16 . C A 868.443 . AB=0.146766;ABP=438.688;AC=3;AF=0.25;AN=12;AO=79;CIGAR=1X;DP=920;DPB=920;DPRA=0.964557;EPP=174.557;EPPR=1829.22;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9988;NS=6;NUMALT=1;ODDS=0;PAIRED=0.835443;PAIREDR=0.865636;PAO=0;PQA=0;PQR=0;PRO=0;QA=3161;QR=33749;RO=841;RPL=0;RPP=174.557;RPPR=1829.22;RPR=79;RUN=1;SAF=79;SAP=174.557;SAR=0;SRF=841;SRP=1829.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:131:115,16:115:4631:16:634:-17.9559,0,-377.26 0/0:158:158,0:158:6347:0:0:0,-47.5627,-570.941 0/1:102:89,13:89:3538:13:524:-16.8013,0,-287.737 0/1:169:139,30:139:5559:30:1199:-57.3088,0,-449.242 0/0:157:151,6:151:6071:6:242:0,-25.1053,-523.986 0/0:203:189,14:189:7603:14:562:0,-10.1862,-632.931 dDocent_Contig_5647 98 . N A 1079.3 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=35;CIGAR=2X;DP=35;DPB=218.5;DPRA=0;EPP=79.0118;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=237;PQA=8257;PQR=0;PRO=0;QA=1193;QR=0;RO=0;RPL=35;RPP=79.0118;RPPR=0;RPR=0;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:1:0,1:0:0:1:35:-3.14875,-0.30103,0 .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:68:-6.11734,-0.60206,0 1|1:28:0,28:0:0:28:955:-85.9149,-8.42884,0 1|1:4:0,4:0:0:4:135:-12.146,-1.20412,0 .:.:.:.:.:.:.:. dDocent_Contig_5648 1 . N G 51.5289 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=14;MQMR=0;NS=1;NUMALT=1;ODDS=7.37776;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=126;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:126:-5.15262,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5649 47 . T C 577.515 . AB=0.0601093;ABP=310.588;AC=4;AF=0.333333;AN=12;AO=12;CIGAR=1X2M1X;DP=301;DPB=301;DPRA=1.004;EPP=9.52472;EPPR=14.1779;GTI=0;LEN=1;MEANALT=2.2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.166667;PAIREDR=0.603175;PAO=0;PQA=0;PQR=0;PRO=0;QA=450;QR=9659;RO=252;RPL=0;RPP=29.068;RPPR=550.221;RPR=12;RUN=1;SAF=3;SAP=9.52472;SAR=9;SRF=108;SRP=14.1779;SRR=144;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:47:39,1,5:39:1527:1,5:38,188:-3.66482,-12.2878,-137.56,0,-122.46,-124.071 0|1:49:38,9,2:38:1447:9,2:353,80:-17.5847,0,-115.956,-22.4322,-112.074,-140.504 0|1:28:18,9,1:18:687:9,1:351,28:-23.532,0,-53.749,-26.7428,-54.2449,-82.7985 0|1:59:45,11,3:45:1722:11,3:412,115:-20.1902,0,-137.984,-24.2961,-131.856,-164.695 0|0:50:50,0,0:50:1915:0,0:0,0:0,-15.0515,-172.589,-15.0515,-172.589,-172.589 0|0:68:62,5,1:62:2361:5,1:196,39:0,-2.54453,-194.671,-15.4583,-192.97,-208.788 dDocent_Contig_5650 98 . N A 34.2092 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=36;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:36:-3.41967,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5651 107 . N A 237.084 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=237;QR=0;RO=0;RPL=0;RPP=18.2106;RPPR=0;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 dDocent_Contig_5653 17 . G C 8955.23 . AB=0.158419;ABP=3463.94;AC=5;AF=0.416667;AN=12;AO=556;CIGAR=1X;DP=4128;DPB=4128;DPRA=0;EPP=1210.35;EPPR=7703.05;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998308;PAO=0;PQA=0;PQR=0;PRO=0;QA=22007;QR=137889;RO=3546;RPL=0;RPP=1210.35;RPPR=7703.05;RPR=556;RUN=1;SAF=556;SAP=1210.35;SAR=0;SRF=3546;SRP=7703.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:713:698,15:698:27046:15:604:0,-159.936,-2377.32 0/1:885:793,74:793:30988:74:2941:-3.39853,0,-2524.97 0/1:631:557,74:557:21639:74:2944:-75.1106,0,-1755.91 0/1:974:855,118:855:33258:118:4638:-124.049,0,-2697.23 0/1:362:279,83:279:10940:83:3275:-185.845,0,-874.99 0/1:563:364,192:364:14018:192:7605:-516.338,0,-1092.97 dDocent_Contig_5655 11 . T A 2375.31 . AB=0.153465;ABP=1056.5;AC=5;AF=0.416667;AN=12;AO=173;CIGAR=1X;DP=1268;DPB=1268;DPRA=0;EPP=378.675;EPPR=2378.6;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.988439;PAIREDR=0.957038;PAO=0;PQA=0;PQR=0;PRO=0;QA=6835;QR=43565;RO=1094;RPL=0;RPP=378.675;RPPR=2378.6;RPR=173;RUN=1;SAF=173;SAP=378.675;SAR=0;SRF=1094;SRP=2378.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:145:124,21:124:4973:21:847:-32.8915,0,-403.8 0/1:253:226,27:226:9046:27:1062:-19.7113,0,-737.443 0/1:142:104,38:104:4136:38:1435:-86.6396,0,-329.469 0/1:238:214,24:214:8555:24:965:-15.5041,0,-697.821 0/1:232:186,45:186:7279:45:1796:-92.0066,0,-584.934 0/0:258:240,18:240:9576:18:730:0,-11.6409,-795.211 dDocent_Contig_5656 18 . T G 37.5797 . AB=0.119048;ABP=55.9529;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=243;DPB=243;DPRA=1.01875;EPP=24.725;EPPR=508.963;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.454936;PAO=0;PQA=0;PQR=0;PRO=0;QA=388;QR=8916;RO=233;RPL=0;RPP=24.725;RPPR=508.963;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=233;SRP=508.963;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:34,0:34:1308:0:0:0,-10.235,-118.002 0/0:54:53,1:53:2033:1:38:0,-12.4584,-179.4 0/0:23:22,1:22:859:1:40:0,-2.92801,-73.6326 0/0:44:41,3:41:1550:3:115:0,-2.52029,-129.033 0/0:46:46,0:46:1751:0:0:0,-13.8474,-157.826 0/1:42:37,5:37:1415:5:195:-5.28077,0,-114.98 dDocent_Contig_5657 26 . G A 163668 . AB=0.0615919;ABP=5288.46;AC=1;AF=0.0833333;AN=12;AO=241;CIGAR=2X;DP=5692;DPB=5692;DPRA=0;EPP=526.335;EPPR=1323.27;GTI=0;LEN=1;MEANALT=3.4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9573;QR=23391;RO=608;RPL=0;RPP=526.335;RPPR=1323.27;RPR=241;RUN=1;SAF=241;SAP=526.335;SAR=0;SRF=608;SRP=1323.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:823:35,1,786:35:1345:1,786:39,31194:-2683.3,-2690.63,-2800.74,-126.208,-233.404,0 0|0:956:162,1,793:162:6269:1,793:41,31415:-2536.62,-2582,-3096.61,0,-511.499,-276.167 0|0:695:111,0,582:111:4210:0,582:0,23191:-1876.28,-1909.7,-2254.83,0,-345.263,-170.064 0|0:1022:212,1,806:212:8145:1,806:27,32186:-2587,-2648.69,-3316.91,0,-666.457,-425.955 0|0:1008:67,45,894:67:2601:45,894:1769,35585:-2965.12,-2839.79,-3039.94,-55.4237,-123.622,0 1|0:1188:21,193,973:21:821:193,973:7697,38472:-3725.68,-3098.16,-3107.55,-566.358,0,-340.952 dDocent_Contig_5658 98 . N G 179.474 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=6;CIGAR=6X;DP=6;DPB=12;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=11;PQA=372;PQR=0;PRO=0;QA=201;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:3:0,3:0:0:3:102:-8.91673,-0.90309,0 1|1:3:0,3:0:0:3:99:-8.72911,-0.90309,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_5659 23 . A C 45.7979 . AB=0.0952381;ABP=182.312;AC=1;AF=0.0833333;AN=12;AO=47;CIGAR=1X;DP=1297;DPB=1297;DPRA=0.463596;EPP=105.07;EPPR=2708.66;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999197;PAO=0;PQA=0;PQR=0;PRO=0;QA=1851;QR=49694;RO=1246;RPL=0;RPP=105.07;RPPR=2708.66;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=1246;SRP=2708.66;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:126:114,12:114:4580:12:482:-5.80158,0,-374.181 0/0:133:123,10:123:4886:10:398:0,-3.85855,-403.457 0/0:169:159,9:159:6342:9:331:0,-20.8443,-540.383 0/0:196:179,16:179:7156:16:640:0,-1.17552,-585.759 0/0:362:360,0:360:14378:0:0:0,-108.371,-1292.6 0/0:311:311,0:311:12352:0:0:0,-93.6203,-1110.8 dDocent_Contig_5660 1 . N G 193.601 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=203;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 1/1:3:0,3:0:0:3:122:-11.3725,-0.90309,0 ./.:.:.:.:.:.:.:. dDocent_Contig_5661 1 . N G 76.8682 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_5662 20 . A G 11084.1 . AB=0.157403;ABP=4368.45;AC=4;AF=0.333333;AN=12;AO=752;CIGAR=1X;DP=5769;DPB=5769;DPRA=0;EPP=1635.96;EPPR=10888.6;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999801;PAO=0;PQA=0;PQR=0;PRO=0;QA=29834;QR=200021;RO=5013;RPL=0;RPP=1635.96;RPPR=10888.6;RPR=752;RUN=1;SAF=752;SAP=1635.96;SAR=0;SRF=5013;SRP=10888.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:749:704,44:704:28133:44:1760:0,-66.855,-2370.82 0/1:1044:926,117:926:36922:117:4603:-100.108,0,-3005.48 0/0:738:704,34:704:28147:34:1347:0,-100.667,-2409.17 0/1:1070:956,114:956:38210:114:4524:-84.9895,0,-3113.21 0/1:974:792,180:792:31537:180:7172:-352.13,0,-2542.46 0/1:1194:931,263:931:37072:263:10428:-578.402,0,-2973.62 dDocent_Contig_5663 80 . A C 49.3788 . AB=0.107914;ABP=188.617;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=996;DPB=996;DPRA=1.01362;EPP=37.7539;EPPR=2122.37;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.998975;PAO=0;PQA=0;PQR=0;PRO=0;QA=540;QR=33972;RO=976;RPL=16;RPP=37.7539;RPPR=2122.37;RPR=0;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=976;SRP=2122.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:65:65,0:65:2205:0:0:0,-19.5669,-198.71 0/0:162:160,0:160:5525:0:0:0,-48.1648,-497.049 0/0:137:137,0:137:4823:0:0:0,-41.2411,-434.233 0/1:139:124,15:124:4342:15:533:-6.46076,0,-349.12 0/0:297:295,0:295:10278:0:0:0,-88.8038,-924.741 0/0:196:195,1:195:6799:1:7:0,-58.3019,-611.306 dDocent_Contig_5664 128 . G T 173.933 . AB=0.2;ABP=46.0055;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=139;DPB=139;DPRA=1.4386;EPP=31.2394;EPPR=274.444;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992;PAO=0;PQA=0;PQR=0;PRO=0;QA=483;QR=4633;RO=125;RPL=0;RPP=31.2394;RPPR=274.444;RPR=13;RUN=1;SAF=0;SAP=31.2394;SAR=13;SRF=0;SRP=274.444;SRR=125;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6809 0/0:27:24,2:24:877:2:78:0,-0.826164,-71.8236 0/1:44:35,9:35:1330:9:329:-16.7108,0,-106.738 0/1:11:9,2:9:349:2:76:-3.90334,0,-28.4596 0/0:15:15,0:15:549:0:0:0,-4.51545,-49.7375 0/0:28:28,0:28:1024:0:0:0,-8.42884,-92.4482 dDocent_Contig_5665 8 . G T 1904.38 . AB=0.195777;ABP=421.838;AC=2;AF=0.166667;AN=12;AO=132;CIGAR=1X;DP=1525;DPB=1525;DPRA=1.69441;EPP=289.645;EPPR=3027.87;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999282;PAO=0;PQA=0;PQR=0;PRO=0;QA=5051;QR=53228;RO=1393;RPL=0;RPP=289.645;RPPR=3027.87;RPR=132;RUN=1;SAF=132;SAP=289.645;SAR=0;SRF=1393;SRP=3027.87;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:161:161,0:161:6101:0:0:0,-48.4658,-549.041 0/0:399:393,6:393:15039:6:234:0,-98.6799,-1331.38 0/0:167:156,11:156:5985:11:429:0,-11.3064,-499.634 0/0:277:264,13:264:10091:13:499:0,-38.1285,-862.585 0/1:223:179,44:179:6828:44:1684:-84.6913,0,-547.284 0/1:298:240,58:240:9184:58:2205:-108.968,0,-736.573 dDocent_Contig_5666 25 . T A 1284.02 . AB=0.213287;ABP=207.22;AC=2;AF=0.166667;AN=12;AO=63;CIGAR=1X;DP=792;DPB=792;DPRA=1.03077;EPP=139.813;EPPR=1586.01;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995885;PAO=0;PQA=0;PQR=0;PRO=0;QA=2486;QR=28366;RO=729;RPL=0;RPP=139.813;RPPR=1586.01;RPR=63;RUN=1;SAF=63;SAP=139.813;SAR=0;SRF=729;SRP=1586.01;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:116:116,0:116:4541:0:0:0,-34.9195,-408.666 0/0:119:119,0:119:4628:0:0:0,-35.8226,-416.512 0/0:155:155,0:155:6033:0:0:0,-46.6596,-542.824 0/0:116:114,2:114:4445:2:73:0,-27.9882,-393.109 0/1:146:116,30:116:4507:30:1200:-64.3271,0,-361.67 0/1:140:109,31:109:4212:31:1213:-67.297,0,-336.957 dDocent_Contig_5667 1 . N G 160.766 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=159;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 1/1:1:0,1:0:0:1:40:-3.99568,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:37:-3.69783,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_5668 22 . A G 2644.4 . AB=0.112897;ABP=3565.4;AC=4;AF=0.333333;AN=12;AO=367;CIGAR=1X;DP=4417;DPB=4417;DPRA=1.10295;EPP=799.941;EPPR=8790.96;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=14461;QR=159240;RO=4047;RPL=0;RPP=799.941;RPPR=8790.96;RPR=367;RUN=1;SAF=367;SAP=799.941;SAR=0;SRF=4047;SRP=8790.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:678:677,0:677:26682:0:0:0,-203.797,-2399.07 0/0:1002:943,58:943:37210:58:2293:0,-95.1912,-3139.1 0/1:621:567,54:567:22304:54:2133:-5.21415,0,-1818.58 0/1:984:884,99:884:34720:99:3879:-53.0177,0,-2825.71 0/1:483:441,42:441:17389:42:1671:-5.21198,0,-1418.29 0/1:649:535,114:535:20935:114:4485:-208.218,0,-1687.13 dDocent_Contig_5669 61 . G C 239.951 . AB=0.170213;ABP=91.8097;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=352;DPB=352;DPRA=0.708738;EPP=46.4397;EPPR=723.939;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.95;PAIREDR=0.96988;PAO=0;PQA=0;PQR=0;PRO=0;QA=772;QR=13124;RO=332;RPL=20;RPP=46.4397;RPPR=723.939;RPR=0;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=332;SRP=723.939;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:49:38,11:38:1496:11:431:-24.39,0,-120.132 0/0:56:56,0:56:2213:0:0:0,-16.8577,-199.337 0/1:45:40,5:40:1592:5:178:-2.81587,0,-129.966 0/0:52:48,4:48:1890:4:163:0,-0.595132,-155.256 0/0:63:63,0:63:2504:0:0:0,-18.9649,-225.506 0/0:87:87,0:87:3429:0:0:0,-26.1896,-308.649 dDocent_Contig_5670 1 . N G 147.837 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=7.37776;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=160;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:160:-14.7834,-1.20412,0 ./.:.:.:.:.:.:.:. dDocent_Contig_5672 26 . C T 2696.07 . AB=0.146842;ABP=1323.57;AC=2;AF=0.166667;AN=12;AO=179;CIGAR=1X;DP=2732;DPB=2732;DPRA=1.61137;EPP=391.704;EPPR=5546.78;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.999608;PAO=0;PQA=0;PQR=0;PRO=0;QA=7108;QR=102091;RO=2553;RPL=0;RPP=391.704;RPPR=5546.78;RPR=179;RUN=1;SAF=179;SAP=391.704;SAR=0;SRF=2553;SRP=5546.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:303:303,0:303:12075:0:0:0,-91.2121,-1085.89 0/0:520:520,0:520:20770:0:0:0,-156.536,-1867.54 0/0:271:271,0:271:10872:0:0:0,-81.5791,-977.734 0/0:419:419,0:419:16756:0:0:0,-126.132,-1506.65 0/1:574:465,109:465:18660:109:4311:-215.156,0,-1505.03 0/1:645:575,70:575:22958:70:2797:-57.6729,0,-1870.02 dDocent_Contig_5678 25 . C T 3251.01 . AB=0.22561;ABP=432.009;AC=3;AF=0.25;AN=12;AO=163;CIGAR=1X;DP=1132;DPB=1132;DPRA=2.31556;EPP=356.96;EPPR=2105;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996901;PAO=0;PQA=0;PQR=0;PRO=0;QA=6451;QR=38643;RO=968;RPL=0;RPP=356.96;RPPR=2105;RPR=163;RUN=1;SAF=163;SAP=356.96;SAR=0;SRF=968;SRP=2105;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:196:157,38:157:6296:38:1508:-76.8554,0,-507.263 0/1:188:122,66:122:4876:66:2582:-175.923,0,-382.141 0/1:272:228,44:228:9091:44:1769:-77.5448,0,-735.769 0/0:125:115,10:115:4592:10:398:0,-1.45051,-377.031 0/0:90:90,0:90:3603:0:0:0,-27.0927,-324.298 0/0:261:256,5:256:10185:5:194:0,-60.7381,-898.183 dDocent_Contig_5679 17 . C T 5492.99 . AB=0.373849;ABP=78.0681;AC=6;AF=0.5;AN=12;AO=203;CIGAR=1X;DP=543;DPB=543;DPRA=0;EPP=443.819;EPPR=741.311;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.926108;PAIREDR=0.970588;PAO=0;PQA=0;PQR=0;PRO=0;QA=8027;QR=13588;RO=340;RPL=0;RPP=443.819;RPPR=741.311;RPR=203;RUN=1;SAF=203;SAP=443.819;SAR=0;SRF=340;SRP=741.311;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:65:54,11:54:2162:11:442:-20.5679,0,-175.177 0/1:110:77,33:77:3068:33:1294:-83.6064,0,-243.084 0/1:62:41,21:41:1624:21:820:-55.4446,0,-127.722 0/1:94:57,37:57:2310:37:1469:-104.163,0,-179.75 0/1:81:33,48:33:1330:48:1874:-144.479,0,-95.5768 0/1:131:78,53:78:3094:53:2128:-152.26,0,-239.099 dDocent_Contig_5680 14 . C G 6075.08 . AB=0.186411;ABP=1473.86;AC=4;AF=0.333333;AN=12;AO=341;CIGAR=1X;DP=3482;DPB=3482;DPRA=0.649268;EPP=743.482;EPPR=6821.43;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.994135;PAIREDR=0.996178;PAO=0;PQA=0;PQR=0;PRO=0;QA=13386;QR=122962;RO=3140;RPL=0;RPP=743.482;RPPR=6821.43;RPR=341;RUN=1;SAF=341;SAP=743.482;SAR=0;SRF=3140;SRP=6821.43;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:387:327,60:327:12811:60:2375:-97.4085,0,-1035.66 0/1:544:423,120:423:16607:120:4735:-262.514,0,-1329.85 0/1:282:222,60:222:8833:60:2348:-126.596,0,-709.57 0/1:509:428,81:428:16845:81:3126:-128.211,0,-1361.57 0/0:820:820,0:820:31860:0:0:0,-246.845,-2864.8 0/0:940:920,20:920:36006:20:802:0,-210.47,-3164.97 dDocent_Contig_5681 69 . C T 1794.78 . AB=0.418605;ABP=12.9082;AC=6;AF=0.5;AN=12;AO=72;CIGAR=1X;DP=172;DPB=172;DPRA=0;EPP=159.356;EPPR=220.158;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.86;NS=6;NUMALT=1;ODDS=0;PAIRED=0.611111;PAIREDR=0.67;PAO=0;PQA=0;PQR=0;PRO=0;QA=2671;QR=3675;RO=100;RPL=72;RPP=159.356;RPPR=220.158;RPR=0;RUN=1;SAF=72;SAP=159.356;SAR=0;SRF=100;SRP=220.158;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:29:12,17:12:440:17:605:-46.0486,0,-31.2146 0/1:29:12,17:12:432:17:620:-47.4043,0,-30.4902 0/1:24:21,3:21:781:3:117:-3.68566,0,-63.3812 0/1:27:15,12:15:570:12:452:-32.8966,0,-43.511 0/1:31:21,10:21:793:10:374:-24.678,0,-62.3637 0/1:32:19,13:19:659:13:503:-35.9853,0,-49.9793 dDocent_Contig_5682 32 . G C 469.475 . AB=0.213592;ABP=76.3976;AC=2;AF=0.166667;AN=12;AO=28;CIGAR=1X;DP=344;DPB=344;DPRA=1.22;EPP=63.8115;EPPR=689.196;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9051;NS=6;NUMALT=1;ODDS=0;PAIRED=0.857143;PAIREDR=0.734177;PAO=0;PQA=0;PQR=0;PRO=0;QA=1138;QR=12553;RO=316;RPL=0;RPP=63.8115;RPPR=689.196;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=316;SRP=689.196;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:52:35,17:35:1356:17:690:-46.7749,0,-106.643 0/0:63:59,4:59:2323:4:162:0,-3.99793,-194.276 0/1:51:46,5:46:1836:5:204:-3.3915,0,-150.097 0/0:78:76,2:76:3043:2:82:0,-15.7007,-266.178 0/0:44:44,0:44:1751:0:0:0,-13.2453,-157.77 0/0:56:56,0:56:2244:0:0:0,-16.8577,-202.093 dDocent_Contig_5683 44 . C A 232.727 . AB=0.203125;ABP=52.0041;AC=3;AF=0.25;AN=12;AO=16;CIGAR=1X;DP=242;DPB=242;DPRA=0.468;EPP=37.7539;EPPR=115.081;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5625;PAIREDR=0.858407;PAO=0;PQA=0;PQR=0;PRO=0;QA=638;QR=8952;RO=226;RPL=0;RPP=37.7539;RPPR=115.081;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=226;SRP=493.763;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:21,4:21:828:4:159:-7.1662,0,-67.3093 0/1:30:24,6:24:970:6:241:-13.0349,0,-78.5685 0/1:9:6,3:6:244:3:118:-8.29345,0,-19.6296 0/0:53:50,3:50:1973:3:120:0,-4.7669,-166.58 0/0:65:65,0:65:2569:0:0:0,-19.5669,-231.351 0/0:60:60,0:60:2368:0:0:0,-18.0618,-213.275 dDocent_Contig_5684 15 . C A 10838.5 . AB=0.201629;ABP=1997.26;AC=5;AF=0.416667;AN=12;AO=551;CIGAR=3M1X1M;DP=2970;DPB=2915.4;DPRA=0;EPP=1199.49;EPPR=5036.48;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=21663;QR=90629;RO=2318;RPL=0;RPP=1199.49;RPPR=5036.48;RPR=551;RUN=1;SAF=551;SAP=1199.49;SAR=0;SRF=2318;SRP=5036.48;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:391:359,0,31:359:14007:0,31:0,1205:0,-108.07,-1259.41,-9.05854,-1160.4,-1151.06 0|1:524:429,0,94:429:16725:0,94:0,3703:-175.481,-304.623,-1679.25,0,-1374.62,-1346.32 0|1:327:207,0,118:207:8126:0,118:0,4599:-315.658,-377.971,-1046.27,0,-668.296,-632.775 0|1:427:336,0,89:336:13136:0,89:0,3491:-185.929,-287.075,-1367.01,0,-1079.93,-1053.14 0|1:603:464,23,114:464:18072:23,114:884,4487:-229.429,-296.544,-1774.85,0,-1412.68,-1450.92 0|1:698:523,68,105:523:20563:68,105:2549,4178:-186.577,-135.284,-1806.19,0,-1482.65,-1659.78 dDocent_Contig_5685 16 . T C 268.174 . AB=0.202899;ABP=55.9124;AC=1;AF=0.0833333;AN=12;AO=24;CIGAR=1X;DP=371;DPB=371;DPRA=0;EPP=55.1256;EPPR=756.511;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.791667;PAIREDR=0.850144;PAO=0;PQA=0;PQR=0;PRO=0;QA=941;QR=13864;RO=347;RPL=0;RPP=55.1256;RPPR=756.511;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=347;SRP=756.511;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:43,1:43:1719:1:40:0,-9.24964,-150.93 0/0:44:43,1:43:1709:1:41:0,-9.15075,-149.939 0/0:58:57,1:57:2287:1:41:0,-13.3652,-201.892 0/1:69:55,14:55:2183:14:542:-28.3403,0,-175.871 0/0:65:63,2:63:2532:2:80:0,-11.9752,-220.415 0/0:91:86,5:86:3434:5:197:0,-9.2897,-290.997 dDocent_Contig_5686 5 . T G 119.115 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X13I3M1X;DP=8;DPB=414.4;DPRA=3.33333;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=25;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=9174;PRO=249;QA=186;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:5:0,5:0:0:5:186:-11.1319,-1.50515,0 1|1:1:0,0:0:0:0:0:0,0,0 .:.:.:.:.:.:.:. 1|1:2:0,0:0:0:0:0:0,0,0 dDocent_Contig_5691 29 . A T 253.452 . AB=0.180723;ABP=76.5003;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=243;DPB=243;DPRA=1.0375;EPP=35.5824;EPPR=498.106;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.3772;NS=6;NUMALT=1;ODDS=0;PAIRED=0.933333;PAIREDR=0.745614;PAO=0;PQA=0;PQR=0;PRO=0;QA=587;QR=9022;RO=228;RPL=0;RPP=35.5824;RPPR=498.106;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=228;SRP=498.106;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:877:0:0:0,-6.62266,-79.1808 0/0:36:36,0:36:1423:0:0:0,-10.8371,-128.31 0/0:50:50,0:50:1969:0:0:0,-15.0515,-177.398 0/0:52:52,0:52:2042:0:0:0,-15.6536,-183.853 0/1:34:30,4:30:1195:4:155:-4.08763,0,-97.5847 0/1:49:38,11:38:1516:11:432:-24.4788,0,-121.908 dDocent_Contig_5693 25 . A G 74.8896 . AB=0.0891304;ABP=677.507;AC=1;AF=0.0833333;AN=12;AO=41;CIGAR=1X;DP=1996;DPB=1996;DPRA=1.4974;EPP=92.0407;EPPR=4183.31;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.97561;PAIREDR=0.996416;PAO=0;PQA=0;PQR=0;PRO=0;QA=1634;QR=77789;RO=1953;RPL=0;RPP=92.0407;RPPR=4243.9;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=1946;SRP=4183.31;SRR=7;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:195:195,0:195:7711:0:0:0,-58.7008,-693.624 0/0:373:373,0:373:14842:0:0:0,-112.284,-1334.66 0/0:199:199,0:199:7902:0:0:0,-59.905,-710.78 0/0:362:361,0:361:14469:0:0:0,-108.672,-1300.98 0/1:460:418,41:418:16711:41:1634:-9.01184,0,-1364.37 0/0:407:407,0:407:16154:0:0:0,-122.519,-1452.62 dDocent_Contig_5694 32 . T C 3255.54 . AB=0.153902;ABP=1429.44;AC=5;AF=0.416667;AN=12;AO=221;CIGAR=1X;DP=1506;DPB=1506;DPRA=0;EPP=482.906;EPPR=2791.18;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0.995475;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8678;QR=51162;RO=1284;RPL=0;RPP=482.906;RPPR=2791.18;RPR=221;RUN=1;SAF=221;SAP=482.906;SAR=0;SRF=1284;SRP=2791.18;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:45:40,5:40:1620:5:196:-4.46758,0,-132.479 0/0:135:125,10:125:5011:10:388:0,-5.36509,-415.584 0/1:79:65,14:65:2570:14:557:-26.6912,0,-207.653 0/1:211:189,22:189:7540:22:865:-14.6445,0,-614.703 0/1:492:416,75:416:16530:75:2926:-115.553,0,-1338.49 0/1:544:449,95:449:17891:95:3746:-173.419,0,-1444.98 dDocent_Contig_5695 22 . A G 3528.51 . AB=0.182692;ABP=912.523;AC=6;AF=0.5;AN=12;AO=190;CIGAR=1X;DP=1040;DPB=1040;DPRA=0;EPP=415.59;EPPR=1822.7;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998807;PAO=0;PQA=0;PQR=0;PRO=0;QA=7487;QR=33111;RO=838;RPL=0;RPP=415.59;RPPR=1822.7;RPR=190;RUN=1;SAF=190;SAP=415.59;SAR=0;SRF=838;SRP=1822.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:111:86,24:86:3406:24:920:-49.5673,0,-273.076 0/1:198:158,34:158:6238:34:1325:-61.3358,0,-503.011 0/1:229:183,44:183:7154:44:1756:-89.5285,0,-574.826 0/1:142:103,39:103:4092:39:1542:-96.2805,0,-325.52 0/1:167:143,22:143:5677:22:877:-29.2467,0,-460.764 0/1:193:165,27:165:6544:27:1067:-38.1139,0,-530.491 dDocent_Contig_5696 90 . G T 195.278 . AB=0.142857;ABP=181.381;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1X;DP=378;DPB=378;DPRA=1.48387;EPP=52.9542;EPPR=773.883;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.434783;PAIREDR=0.664789;PAO=0;PQA=0;PQR=0;PRO=0;QA=784;QR=12236;RO=355;RPL=16;RPP=10.6577;RPPR=39.2769;RPR=7;RUN=1;SAF=16;SAP=10.6577;SAR=7;SRF=216;SRP=39.2769;SRR=139;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:44,0:44:1497:0:0:0,-13.2453,-135.024 0/1:71:62,9:62:2158:9:303:-6.2245,0,-173.121 0/0:80:80,0:80:2769:0:0:0,-24.0824,-249.463 0/1:90:76,14:76:2621:14:481:-16.5252,0,-209.054 0/0:45:45,0:45:1552:0:0:0,-13.5463,-139.973 0/0:48:48,0:48:1639:0:0:0,-14.4494,-147.797 dDocent_Contig_5697 200 . T C 124.873 . AB=0.194444;ABP=32.2045;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=216;DPB=216;DPRA=1;EPP=18.2106;EPPR=456.848;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.736842;PAO=0;PQA=0;PQR=0;PRO=0;QA=272;QR=8016;RO=209;RPL=7;RPP=18.2106;RPPR=456.848;RPR=0;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=456.848;SRR=209;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:728:0:0:0,-5.71957,-65.8501 0/0:57:57,0:57:2202:0:0:0,-17.1587,-198.4 0/0:39:39,0:39:1498:0:0:0,-11.7402,-135.095 0/0:24:24,0:24:917:0:0:0,-7.22472,-82.8458 0/0:41:41,0:41:1561:0:0:0,-12.3422,-140.761 0/1:36:29,7:29:1110:7:272:-14.0101,0,-89.3658 dDocent_Contig_5698 98 . N A 122.276 . AB=0;ABP=0;AC=6;AF=0.75;AN=8;AO=5;CIGAR=1X;DP=6;DPB=6;DPRA=1.66667;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=119;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:20:-1.89999,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 0/0:1:0,0:0:0:0:0:0,0,0 dDocent_Contig_5699 98 . N T 260.75 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=10;CIGAR=1X;DP=10;DPB=10;DPRA=0;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=271;QR=0;RO=0;RPL=10;RPP=24.725;RPPR=0;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:32:-3.03987,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:3:0,3:0:0:3:81:-7.55852,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:123:-11.3748,-1.20412,0 dDocent_Contig_5700 17 . G C 16126.6 . AB=0.311288;ABP=625.061;AC=6;AF=0.5;AN=12;AO=626;CIGAR=1X;DP=2011;DPB=2011;DPRA=0;EPP=1362.35;EPPR=3008.33;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.997832;PAO=0;PQA=0;PQR=0;PRO=0;QA=24768;QR=54396;RO=1384;RPL=0;RPP=1362.35;RPPR=3008.33;RPR=626;RUN=1;SAF=626;SAP=1362.35;SAR=0;SRF=1384;SRP=3008.33;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:336:288,48:288:11282:48:1923:-72.1285,0,-913.561 0/1:381:277,104:277:10890:104:4130:-256.999,0,-864.758 0/1:209:168,41:168:6588:41:1627:-83.7509,0,-529.74 0/1:542:390,152:390:15354:152:6039:-380.146,0,-1217.63 0/1:230:89,140:89:3507:140:5531:-428.604,0,-246.653 0/1:313:172,141:172:6775:141:5518:-402.254,0,-515.267 dDocent_Contig_5701 70 . C T 1246.96 . AB=0.152263;ABP=768.682;AC=2;AF=0.166667;AN=12;AO=135;CIGAR=1X;DP=1717;DPB=1717;DPRA=2.2014;EPP=296.159;EPPR=3427.42;GTI=0;LEN=1;MEANALT=1.8;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4698;QR=52816;RO=1577;RPL=135;RPP=296.159;RPPR=3427.42;RPR=0;RUN=1;SAF=135;SAP=296.159;SAR=0;SRF=1577;SRP=3427.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:281:267,13:267:9030:13:460:0,-42.9025,-771.017 0/0:415:405,7:405:13348:7:251:0,-101.32,-1178.35 0/1:298:267,31:267:8925:31:1095:-9.15311,0,-713.602 0/1:431:350,80:350:11825:80:2756:-118.765,0,-934.702 0/0:143:143,0:143:4842:0:0:0,-43.0473,-435.966 0/0:149:145,4:145:4846:4:136:0,-32.2778,-423.749 dDocent_Contig_5702 25 . G A 85600 . AB=0.596085;ABP=383.998;AC=6;AF=0.5;AN=12;AO=2832;CIGAR=1X2M1X1M1X;DP=4751;DPB=4751;DPRA=0;EPP=6152.62;EPPR=4091.89;GTI=0;LEN=1;MEANALT=6;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=1;PAIREDR=0.998938;PAO=0;PQA=0;PQR=0;PRO=0;QA=111108;QR=68162;RO=1883;RPL=0;RPP=6152.62;RPPR=4091.89;RPR=2832;RUN=1;SAF=2832;SAP=6152.62;SAR=0;SRF=1883;SRP=4091.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:639:254,380:254:9189:380:14830:-1142.67,0,-635.8 0|1:685:348,333:348:12632:333:13033:-966.77,0,-931.172 0|1:469:201,265:201:7326:265:10392:-794.293,0,-518.875 0|1:934:451,471:451:16202:471:18437:-1380.28,0,-1179.94 0|1:981:348,629:348:12631:629:24809:-1936.64,0,-842.221 0|1:1043:281,754:281:10182:754:29607:-2350.57,0,-604.468 dDocent_Contig_5704 69 . G A 13296.4 . AB=0.715556;ABP=275.429;AC=6;AF=0.5;AN=12;AO=483;CIGAR=1X;DP=675;DPB=675;DPRA=0;EPP=1051.83;EPPR=419.933;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.987578;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=17141;QR=6929;RO=192;RPL=483;RPP=1051.83;RPPR=419.933;RPR=0;RUN=1;SAF=483;SAP=1051.83;SAR=0;SRF=192;SRP=419.933;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:84:19,65:19:666:65:2276:-179.816,0,-34.9781 0/1:109:20,89:20:708:89:3077:-244.346,0,-31.2342 0/1:86:33,53:33:1184:53:1903:-145.652,0,-80.9739 0/1:120:31,89:31:1142:89:3200:-252.08,0,-66.9654 0/1:125:43,82:43:1577:82:2946:-227.734,0,-104.589 0/1:151:46,105:46:1652:105:3739:-291.231,0,-103.507 dDocent_Contig_5705 19 . A G 1083 . AB=0.167568;ABP=358.169;AC=4;AF=0.333333;AN=12;AO=68;CIGAR=1X;DP=583;DPB=583;DPRA=0.755738;EPP=150.67;EPPR=1119.15;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.911765;PAIREDR=0.879377;PAO=0;PQA=0;PQR=0;PRO=0;QA=2742;QR=20303;RO=514;RPL=0;RPP=150.67;RPPR=1119.15;RPR=68;RUN=1;SAF=68;SAP=150.67;SAR=0;SRF=514;SRP=1119.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:65:53,11:53:2104:11:443:-20.5506,0,-169.866 0/1:103:71,32:71:2811:32:1299:-86.1646,0,-222.098 0/0:91:85,6:85:3333:6:235:0,-5.87421,-278.52 0/1:111:100,11:100:3975:11:440:-6.5402,0,-324.332 0/1:91:83,8:83:3292:8:325:-2.2257,0,-268.958 0/0:122:122,0:122:4788:0:0:0,-36.7257,-430.856 dDocent_Contig_5706 98 . N T 193.124 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=197;QR=0;RO=0;RPL=8;RPP=20.3821;RPPR=0;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:47:-4.46336,-0.60206,0 1/1:2:0,2:0:0:2:50:-4.74835,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:54:-5.12834,-0.60206,0 1/1:2:0,2:0:0:2:46:-4.36917,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_5707 94 . G A 185.786 . AB=0.208333;ABP=38.4777;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=316;DPB=316;DPRA=0.895522;EPP=3.87889;EPPR=57.9642;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.431373;PAO=0;PQA=0;PQR=0;PRO=0;QA=380;QR=11084;RO=306;RPL=10;RPP=24.725;RPPR=667.481;RPR=0;RUN=1;SAF=4;SAP=3.87889;SAR=6;SRF=197;SRP=57.9642;SRR=109;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:32,0:32:1172:0:0:0,-9.63296,-105.77 0/0:60:60,0:60:2167:0:0:0,-18.0618,-195.259 0/0:40:40,0:40:1451:0:0:0,-12.0412,-130.865 0/0:72:72,0:72:2569:0:0:0,-21.6742,-231.413 0/0:64:64,0:64:2306:0:0:0,-19.2659,-207.77 0/1:48:38,10:38:1419:10:380:-20.1014,0,-113.533 dDocent_Contig_5708 107 . N A 95152.6 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=3362;CIGAR=1X;DP=3362;DPB=3362;DPRA=0;EPP=7303.5;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999703;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=105721;QR=0;RO=0;RPL=0;RPP=7303.5;RPPR=0;RPR=3362;RUN=1;SAF=0;SAP=7303.5;SAR=3362;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:624:0,624:0:0:624:19640:-1767.47,-187.843,0 1/1:646:0,646:0:0:646:20331:-1829.65,-194.465,0 1/1:342:0,342:0:0:342:10649:-958.486,-102.952,0 1/1:802:0,802:0:0:802:24961:-2246.26,-241.426,0 1/1:479:0,479:0:0:479:15244:-1371.93,-144.193,0 1/1:469:0,469:0:0:469:14896:-1340.61,-141.183,0 dDocent_Contig_5709 61 . T C 262.868 . AB=0.13253;ABP=197.71;AC=3;AF=0.25;AN=12;AO=25;CIGAR=1X;DP=358;DPB=358;DPRA=1.15741;EPP=57.2971;EPPR=723.939;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.72;PAIREDR=0.605422;PAO=0;PQA=0;PQR=0;PRO=0;QA=1008;QR=13074;RO=332;RPL=14;RPP=3.79203;RPPR=11.4869;RPR=11;RUN=1;SAF=14;SAP=3.79203;SAR=11;SRF=148;SRP=11.4869;SRR=184;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:77:77,0:77:2981:0:0:0,-23.1793,-268.388 0/0:84:81,3:81:3185:3:121:0,-14.0063,-275.448 0/1:45:41,4:41:1636:4:162:-1.4204,0,-133.928 0/1:60:50,10:50:1968:10:399:-18.207,0,-159.249 0/0:31:31,0:31:1237:0:0:0,-9.33193,-111.601 0/1:61:52,8:52:2067:8:326:-11.283,0,-167.79 dDocent_Contig_5710 65 . T C 3462.98 . AB=0.166804;ABP=1176.57;AC=4;AF=0.333333;AN=12;AO=209;CIGAR=1X;DP=2085;DPB=2085;DPRA=0.814599;EPP=456.848;EPPR=4072.35;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8225;QR=73813;RO=1874;RPL=209;RPP=456.848;RPPR=4072.35;RPR=0;RUN=1;SAF=209;SAP=456.848;SAR=0;SRF=1874;SRP=4072.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:265:235,30:235:9211:30:1180:-26.6972,0,-748.711 0/1:324:243,80:243:9580:80:3142:-185.546,0,-764.338 0/1:305:265,40:265:10320:40:1589:-51.4402,0,-836.374 0/1:323:269,53:269:10628:53:2074:-89.8359,0,-858.851 0/0:411:411,0:411:16232:0:0:0,-123.723,-1459.66 0/0:457:451,6:451:17842:6:240:0,-115.597,-1582.38 dDocent_Contig_5711 24 . A G 710.465 . AB=0.184332;ABP=190.828;AC=3;AF=0.25;AN=12;AO=60;CIGAR=1X;DP=540;DPB=540;DPRA=0;EPP=133.299;EPPR=1045.32;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.333333;PAIREDR=0.420833;PAO=0;PQA=0;PQR=0;PRO=0;QA=2319;QR=18322;RO=480;RPL=0;RPP=133.299;RPPR=1045.32;RPR=60;RUN=1;SAF=60;SAP=133.299;SAR=0;SRF=480;SRP=1045.32;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:76:68,8:68:2606:8:302:-4.64948,0,-211.829 0/0:110:102,8:102:3944:8:309:0,-4.94264,-326.849 0/0:93:88,5:88:3458:5:181:0,-11.3554,-294.641 0/0:120:113,7:113:4210:7:267:0,-11.7363,-354.572 0/1:62:48,14:48:1820:14:564:-32.4387,0,-145.367 0/1:79:61,18:61:2284:18:696:-39.18,0,-181.987 dDocent_Contig_5712 107 . N A 59.8472 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=63;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:63:-5.98364,-0.60206,0 dDocent_Contig_5713 107 . N A 178.751 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=180;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:108:-10.0752,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:36:-3.59827,-0.30103,0 1/1:1:0,1:0:0:1:36:-3.59827,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_5714 51 . G C 68.1058 . AB=0.106195;ABP=155.225;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=289;DPB=289;DPRA=1.27559;EPP=35.5824;EPPR=597.994;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.333333;PAIREDR=0.481752;PAO=0;PQA=0;PQR=0;PRO=0;QA=602;QR=10539;RO=274;RPL=15;RPP=35.5824;RPPR=597.994;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=274;SRP=597.994;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:62:56,6:56:2134:6:236:-2.94739,0,-173.612 0/0:49:46,3:46:1771:3:121:0,-3.47027,-148.357 0/0:20:20,0:20:782:0:0:0,-6.0206,-70.7059 0/1:51:45,6:45:1746:6:245:-7.07694,0,-142.035 0/0:47:47,0:47:1799:0:0:0,-14.1484,-162.155 0/0:60:60,0:60:2307:0:0:0,-18.0618,-207.833 dDocent_Contig_5715 118 . C T 87.7587 . AB=0.148148;ABP=90.1105;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=241;DPB=241;DPRA=1.0125;EPP=29.068;EPPR=500.277;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9869;NS=6;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=0.790393;PAO=0;PQA=0;PQR=0;PRO=0;QA=397;QR=7348;RO=229;RPL=0;RPP=29.068;RPPR=500.277;RPR=12;RUN=1;SAF=0;SAP=29.068;SAR=12;SRF=0;SRP=500.277;SRR=229;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:37,0:37:1239:0:0:0,-11.1381,-111.808 0/0:46:46,0:46:1462:0:0:0,-13.8474,-131.861 0/0:44:44,0:44:1391:0:0:0,-13.2453,-125.469 0/0:33:33,0:33:1082:0:0:0,-9.93399,-97.679 0/1:35:29,6:29:908:6:198:-7.60859,0,-71.4736 0/1:46:40,6:40:1266:6:199:-4.38883,0,-100.376 dDocent_Contig_5716 150 . C A 80.7937 . AB=0.208333;ABP=20.744;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=181;DPB=181;DPRA=1.82051;EPP=35.5824;EPPR=363.475;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.927711;PAO=0;PQA=0;PQR=0;PRO=0;QA=491;QR=5992;RO=166;RPL=0;RPP=35.5824;RPPR=363.475;RPR=15;RUN=1;SAF=0;SAP=35.5824;SAR=15;SRF=0;SRP=363.475;SRR=166;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:24,3:24:874:3:75:0,-1.13024,-71.9834 0/0:44:41,3:41:1492:3:87:0,-5.12938,-126.453 0/1:24:19,5:19:684:5:183:-9.60203,0,-54.6594 0/0:47:43,4:43:1557:4:146:0,-0.650701,-126.919 0/0:14:14,0:14:482:0:0:0,-4.21442,-43.6988 0/0:25:25,0:25:903:0:0:0,-7.52575,-81.5874 dDocent_Contig_5717 98 . N T 2100.66 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=78;CIGAR=1X;DP=78;DPB=78;DPRA=0;EPP=172.385;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2308;QR=0;RO=0;RPL=78;RPP=172.385;RPPR=0;RPR=0;RUN=1;SAF=78;SAP=172.385;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:9:0,9:0:0:9:290:-26.4153,-2.70927,0 1/1:2:0,2:0:0:2:65:-6.17345,-0.60206,0 1/1:2:0,2:0:0:2:16:-1.52,-0.60206,0 1/1:12:0,12:0:0:12:346:-31.4213,-3.61236,0 1/1:23:0,23:0:0:23:703:-63.5584,-6.92369,0 1/1:30:0,30:0:0:30:888:-80.197,-9.0309,0 dDocent_Contig_5718 49 . C T 160.771 . AB=0.118644;ABP=301.128;AC=2;AF=0.166667;AN=12;AO=29;CIGAR=1X;DP=643;DPB=643;DPRA=1.19454;EPP=65.983;EPPR=1325.45;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.965517;PAIREDR=0.960848;PAO=0;PQA=0;PQR=0;PRO=0;QA=1031;QR=21620;RO=613;RPL=0;RPP=65.983;RPPR=1325.45;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=613;SRP=1334.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:86:86,0:86:3034:0:0:0,-25.8886,-273.276 0/0:124:124,0:124:4378:0:0:0,-37.3277,-394.167 0/0:83:83,0:83:2913:0:0:0,-24.9855,-262.383 0/0:114:113,1:113:4056:1:37:0,-30.6196,-361.505 0/1:120:105,14:105:3628:14:487:-8.2571,0,-290.82 0/1:116:102,14:102:3611:14:507:-11.0418,0,-290.257 dDocent_Contig_5719 1 . N G 146.002 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=7.37776;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=158;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:158:-14.5999,-1.20412,0 ./.:.:.:.:.:.:.:. dDocent_Contig_5720 31 . T C 375.428 . AB=0.123404;ABP=292.5;AC=3;AF=0.25;AN=12;AO=29;CIGAR=1X2M1X2M1X3M1X;DP=306;DPB=306;DPRA=1.65493;EPP=65.983;EPPR=558.907;GTI=0;LEN=1;MEANALT=3.5;MQM=59.2414;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1150;QR=10042;RO=256;RPL=0;RPP=65.983;RPPR=558.907;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=256;SRP=558.907;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:54:45,3,5:45:1737:3,5:121,190:-2.02796,-5.96415,-147.71,0,-133.036,-141.138 0|1:92:75,10,4:75:2955:10,4:391,160:-9.58785,0,-240.131,-18.979,-229.961,-260.903 0|1:31:22,5,3:22:874:5,3:198,119:-9.67473,0,-70.4529,-6.50117,-62.1624,-77.556 0|1:58:43,11,2:43:1693:11,2:440,82:-23.4111,0,-136.098,-29.5795,-132.64,-168.287 0|0:23:23,0,0:23:906:0,0:0,0:0,-6.92369,-81.8541,-6.92369,-81.8541,-81.8541 0|0:48:48,0,0:48:1877:0,0:0,0:0,-14.4494,-169.161,-14.4494,-169.161,-169.161 dDocent_Contig_5721 98 . N T 422.761 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=13;CIGAR=1X;DP=13;DPB=13;DPRA=0;EPP=31.2394;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=448;QR=0;RO=0;RPL=13;RPP=31.2394;RPPR=0;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 1/1:2:0,2:0:0:2:66:-6.26818,-0.60206,0 1/1:3:0,3:0:0:3:103:-9.61002,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:6:0,6:0:0:6:210:-19.2425,-1.80618,0 dDocent_Contig_5722 42 . A G 1655.57 . AB=0.340314;ABP=45.3142;AC=4;AF=0.333333;AN=12;AO=72;CIGAR=1X;DP=365;DPB=365;DPRA=0.977419;EPP=159.356;EPPR=639.252;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.986111;PAIREDR=0.986348;PAO=0;PQA=0;PQR=0;PRO=0;QA=2831;QR=11555;RO=293;RPL=0;RPP=159.356;RPPR=639.252;RPR=72;RUN=1;SAF=72;SAP=159.356;SAR=0;SRF=293;SRP=639.252;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:57:40,17:40:1559:17:680:-44.3711,0,-123.389 0/1:37:25,12:25:978:12:460:-30.606,0,-77.176 0/1:37:29,8:29:1133:8:305:-16.669,0,-91.106 0/1:60:32,28:32:1263:28:1099:-81.1329,0,-95.8788 0/0:62:62,0:62:2484:0:0:0,-18.6639,-223.702 0/0:112:105,7:105:4138:7:287:0,-7.51013,-346.186 dDocent_Contig_5723 107 . N C 118.203 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=121;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:87:-8.11888,-0.90309,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5724 35 . G A 887.797 . AB=0.375;ABP=14.9534;AC=3;AF=0.25;AN=12;AO=33;CIGAR=1X;DP=291;DPB=291;DPRA=0.433498;EPP=74.6689;EPPR=563.25;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1327;QR=10191;RO=258;RPL=0;RPP=74.6689;RPPR=563.25;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=258;SRP=563.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:25,5:25:1006:5:200:-9.34864,0,-81.806 0/0:15:15,0:15:592:0:0:0,-4.51545,-53.618 0/1:31:12,19:12:474:19:768:-60.1093,0,-33.6751 0/1:27:18,9:18:724:9:359:-24.5435,0,-57.3579 0/0:147:147,0:147:5771:0:0:0,-44.2514,-519.179 0/0:41:41,0:41:1624:0:0:0,-12.3422,-146.394 dDocent_Contig_5725 17 . C A 182.63 . AB=0.119205;ABP=193.194;AC=1;AF=0.0833333;AN=12;AO=33;CIGAR=1X;DP=2357;DPB=2357;DPRA=0.43366;EPP=74.6689;EPPR=5043;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=59.9927;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.69539;PAO=0;PQA=0;PQR=0;PRO=0;QA=1317;QR=91915;RO=2321;RPL=0;RPP=74.6689;RPPR=5043;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=2321;SRP=5043;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:269:254,15:254:10077:15:596:0,-27.001,-852.36 0/0:168:167,0:167:6634:0:0:0,-50.272,-596.389 0/1:151:132,18:132:5249:18:721:-19.7859,0,-426.857 0/0:352:352,0:352:13829:0:0:0,-105.963,-1243.66 0/0:722:721,0:721:28642:0:0:0,-217.043,-2574.94 0/0:695:695,0:695:27484:0:0:0,-209.216,-2471.21 dDocent_Contig_5726 20 . A G 148.595 . AB=0.103004;ABP=321.974;AC=1;AF=0.0833333;AN=12;AO=55;CIGAR=1X;DP=1361;DPB=1361;DPRA=0.902024;EPP=122.441;EPPR=2836.78;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.977778;PAO=0;PQA=0;PQR=0;PRO=0;QA=2209;QR=51954;RO=1305;RPL=0;RPP=122.441;RPPR=2836.78;RPR=55;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=1305;SRP=2836.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:188:180,7:180:7136:7:282:0,-30.9488,-616.166 0/1:233:209,24:209:8348:24:958:-16.3824,0,-680.71 0/0:131:123,8:123:4888:8:325:0,-9.81587,-410.198 0/0:270:258,12:258:10221:12:483:0,-37.4572,-875.447 0/0:247:247,0:247:9877:0:0:0,-74.3544,-888.291 0/0:292:288,4:288:11484:4:161:0,-73.0255,-1017.89 dDocent_Contig_5727 12 . A G 476.159 . AB=0.230769;ABP=68.4885;AC=4;AF=0.333333;AN=12;AO=24;CIGAR=1X;DP=163;DPB=163;DPRA=0.881356;EPP=55.1256;EPPR=304.845;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=941;QR=5503;RO=139;RPL=0;RPP=55.1256;RPPR=304.845;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=139;SRP=304.845;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:13,3:13:517:3:120:-6.37083,0,-42.0617 0/1:20:15,5:15:602:5:194:-11.8079,0,-48.4992 0/1:25:14,11:14:543:11:449:-33.2401,0,-41.6836 0/0:49:49,0:49:1926:0:0:0,-14.7505,-173.558 0/1:43:38,5:38:1512:5:178:-3.41611,0,-123.387 0/0:10:10,0:10:403:0:0:0,-3.0103,-36.6301 dDocent_Contig_5728 80 . G A 1625.31 . AB=0.146843;ABP=1478.47;AC=2;AF=0.166667;AN=12;AO=342;CIGAR=1X;DP=5452;DPB=5452;DPRA=0.713998;EPP=745.654;EPPR=11094.9;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10925;QR=166076;RO=5108;RPL=342;RPP=745.654;RPPR=11094.9;RPR=0;RUN=1;SAF=342;SAP=745.654;SAR=0;SRF=5108;SRP=11094.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:688:654,34:654:21206:34:1096:0,-108.173,-1809.39 0/1:833:692,139:692:22397:139:4438:-149.409,0,-1765.26 0/1:529:468,61:468:15248:61:1948:-16.3448,0,-1212.96 0/0:1088:981,107:981:32103:107:3409:0,-20.4715,-2581.65 0/0:1121:1120,1:1120:36109:1:34:0,-334.056,-3245.82 0/0:1193:1193,0:1193:39013:0:0:0,-359.129,-3510.4 dDocent_Contig_5729 39 . A T 82.038 . AB=0.110169;ABP=158.767;AC=1;AF=0.0833333;AN=12;AO=27;CIGAR=1X;DP=649;DPB=649;DPRA=1.39766;EPP=61.6401;EPPR=1353.67;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.993569;PAO=0;PQA=0;PQR=0;PRO=0;QA=1065;QR=23972;RO=622;RPL=0;RPP=61.6401;RPPR=1353.67;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=622;SRP=1353.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:117:114,3:114:4380:3:118:0,-24.2178,-383.237 0/1:118:105,13:105:4058:13:499:-9.72668,0,-329.757 0/0:113:107,6:107:4152:6:245:0,-11.5869,-351.295 0/0:130:125,5:125:4843:5:203:0,-20.4808,-417.203 0/0:105:105,0:105:3997:0:0:0,-31.6081,-359.781 0/0:66:66,0:66:2542:0:0:0,-19.868,-228.964 dDocent_Contig_5730 157 . A G 10414.6 . AB=0.54602;ABP=17.8001;AC=4;AF=0.333333;AN=12;AO=453;CIGAR=1X;DP=2848;DPB=2848;DPRA=0;EPP=986.687;EPPR=5177.63;GTI=0;LEN=1;MEANALT=1.83333;MQM=59.9934;MQMR=59.9929;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996223;PAO=0;PQA=0;PQR=0;PRO=0;QA=14607;QR=77038;RO=2383;RPL=0;RPP=986.687;RPPR=5177.63;RPR=453;RUN=1;SAF=0;SAP=986.687;SAR=453;SRF=0;SRP=5177.63;SRR=2383;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:152:80,72:80:2799:72:2266:-158.435,0,-206.372 0/1:310:126,183:126:4158:183:6004:-447.1,0,-280.916 0/1:162:63,99:63:2245:99:3268:-245.581,0,-153.52 0/1:180:94,85:94:3233:85:2792:-197.568,0,-237.221 0/0:871:861,6:861:27283:6:127:0,-249.548,-2443.44 0/0:1173:1159,8:1159:37320:8:150:0,-337.762,-3344.4 dDocent_Contig_5731 1 . N G 27485.3 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=878;CIGAR=1X;DP=878;DPB=878;DPRA=0;EPP=1892.23;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=56.0319;MQMR=0;NS=6;NUMALT=1;ODDS=3.38813e-21;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=30618;QR=0;RO=0;RPL=0;RPP=1909.56;RPPR=0;RPR=878;RUN=1;SAF=2;SAP=1892.23;SAR=876;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:114:0,114:0:0:114:3891:-349.904,-34.3174,0 1/1:166:0,166:0:0:166:5656:-507.474,-49.971,0 1/1:113:0,113:0:0:113:4024:-361.293,-34.0164,0 1/1:174:0,174:0:0:174:6092:-547.319,-52.3792,0 1/1:116:0,116:0:0:116:4041:-362.234,-34.9195,0 1/1:195:0,195:0:0:195:6914:-619.463,-58.7009,0 dDocent_Contig_5732 50 . G A 54.0137 . AB=0.0958084;ABP=239.987;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=607;DPB=607;DPRA=1.11498;EPP=46.4397;EPPR=1150.71;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.55;PAIREDR=0.391823;PAO=0;PQA=0;PQR=0;PRO=0;QA=806;QR=23175;RO=587;RPL=20;RPP=46.4397;RPPR=1150.71;RPR=0;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=587;SRP=1277.66;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:94:94,0:94:3664:0:0:0,-28.2968,-329.79 0/0:153:149,4:149:5916:4:160:0,-31.2742,-517.454 0/0:102:102,0:102:4061:0:0:0,-30.7051,-365.472 0/0:91:91,0:91:3590:0:0:0,-27.3937,-323.149 0/1:65:59,6:59:2314:6:242:-2.59,0,-188.86 0/1:102:92,10:92:3630:10:404:-6.015,0,-296.023 dDocent_Contig_5733 18 . T C 96166.9 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=87;CIGAR=2X;DP=3303;DPB=3303;DPRA=2.3377;EPP=191.928;EPPR=574.108;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=59.8175;NS=6;NUMALT=2;ODDS=0;PAIRED=0.977011;PAIREDR=0.00380228;PAO=0;PQA=0;PQR=0;PRO=0;QA=3455;QR=10347;RO=263;RPL=0;RPP=191.928;RPPR=574.108;RPR=87;RUN=1;SAF=87;SAP=191.928;SAR=0;SRF=263;SRP=574.108;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:328:51,0,277:51:2021:0,277:0,10885:-879.625,-894.978,-1061.32,0,-166.734,-83.3487 0|0:531:61,0,470:61:2416:0,470:0,18584:-1509.08,-1527.44,-1726.28,0,-199.235,-57.7509 0|0:305:24,0,280:24:940:0,280:0,11037:-906.669,-913.894,-991.184,-6.9863,-84.2884,0 0|0:646:50,4,589:50:1972:4,589:164,23167:-1902.87,-1904.38,-2065.24,-15.2553,-163.769,0 0|0:797:34,48,713:34:1349:48,713:1897,27937:-2383.89,-2238.03,-2334.63,-103.588,-58.5432,0 0|0:696:43,35,615:43:1649:35,615:1394,24349:-2037.79,-1935.95,-2060.73,-49.8219,-70.3413,0 dDocent_Contig_5734 83 . C T 340.143 . AB=0.194969;ABP=131.51;AC=2;AF=0.166667;AN=12;AO=38;CIGAR=1X;DP=418;DPB=418;DPRA=1.10625;EPP=85.5263;EPPR=828.17;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.315789;PAIREDR=0.465789;PAO=0;PQA=0;PQR=0;PRO=0;QA=1157;QR=12502;RO=380;RPL=38;RPP=85.5263;RPPR=828.17;RPR=0;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=380;SRP=828.17;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:57:55,2:55:1773:2:57:0,-11.7443,-154.429 0/0:64:64,0:64:2130:0:0:0,-19.2659,-191.972 0/1:59:47,12:47:1585:12:367:-15.5683,0,-125.177 0/0:71:67,4:67:2238:4:129:0,-9.44343,-189.757 0/0:67:66,1:66:2140:1:32:0,-16.9697,-189.663 0/1:100:81,19:81:2636:19:572:-21.6679,0,-207.385 dDocent_Contig_5735 18 . C T 8886.4 . AB=0.169429;ABP=1033.81;AC=1;AF=0.0833333;AN=12;AO=184;CIGAR=7M2X1M;DP=1086;DPB=1078.8;DPRA=0;EPP=402.561;EPPR=1234.24;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=2.22045e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7294;QR=22245;RO=567;RPL=0;RPP=402.561;RPPR=1234.24;RPR=184;RUN=1;SAF=184;SAP=402.561;SAR=0;SRF=567;SRP=1234.24;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:134:99,10,5,20:99:3866:10,5,20:321,192,774:-33.7891,-37.75,-352.543,-47.8297,-339.794,-364.144,0,-291.988,-302.083,-311.821 0|0:160:97,2,20,40:97:3811:2,20,40:71,779,1606:-103.142,-126.559,-439.404,-68.326,-375.988,-375.751,0,-307.673,-249.439,-301.416 0|0:122:76,0,12,33:76:2976:0,12,33:0,454,1289:-83.0802,-105.958,-350.656,-68.7501,-313.446,-309.834,0,-244.706,-207.497,-234.772 0|0:193:119,6,19,49:119:4680:6,19,49:210,755,1944:-124.198,-142.941,-526.089,-97.8627,-465.739,-477.101,0,-367.881,-322.806,-370.212 0|1:220:84,0,75,61:84:3313:0,75,61:0,2984,2394:-220.403,-245.69,-518.268,0,-272.58,-250.003,-48.8425,-321.419,-75.731,-303.057 0|0:257:92,0,53,111:92:3599:0,53,111:0,2130,4409:-335.25,-362.944,-658.844,-187.421,-483.32,-467.366,0,-295.896,-120.369,-262.481 dDocent_Contig_5736 148 . T G 130.706 . AB=0.155844;ABP=82.2267;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=332;DPB=332;DPRA=1.5098;EPP=29.068;EPPR=695.71;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=416;QR=10460;RO=319;RPL=0;RPP=29.068;RPPR=695.71;RPR=12;RUN=1;SAF=0;SAP=29.068;SAR=12;SRF=0;SRP=695.71;SRR=319;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:30,0:30:1000:0:0:0,-9.0309,-89.9612 0/0:36:36,0:36:1165:0:0:0,-10.8371,-105.141 0/0:68:68,0:68:2236:0:0:0,-20.47,-201.501 0/0:50:50,0:50:1700:0:0:0,-15.0515,-153.286 0/0:70:70,0:70:2268:0:0:0,-21.0721,-204.379 0/1:77:65,12:65:2091:12:416:-14.5934,0,-165.27 dDocent_Contig_5737 78 . C A 227.909 . AB=0.170732;ABP=118.84;AC=3;AF=0.25;AN=12;AO=25;CIGAR=1X2M1X;DP=198;DPB=198;DPRA=1.0375;EPP=57.2971;EPPR=374.332;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.88;PAIREDR=0.783626;PAO=0;PQA=0;PQR=0;PRO=0;QA=855;QR=6232;RO=171;RPL=0;RPP=57.2971;RPPR=374.332;RPR=25;RUN=1;SAF=0;SAP=57.2971;SAR=25;SRF=0;SRP=374.332;SRR=171;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:17:11,6,0:11:404:6,0:206,0:-13.7593,0,-31.5893,-17.0706,-33.3955,-50.1144 0|0:43:39,4,0:39:1431:4,0:135,0:0,-0.460838,-116.601,-11.7402,-117.806,-128.745 0|0:17:13,2,2:13:472:2,2:67,73:-2.066,-0.568156,-38.5085,0,-33.1459,-37.9663 0|1:37:32,5,0:32:1170:5,0:173,0:-4.7721,0,-94.4688,-14.4051,-95.974,-110.031 0|0:32:32,0,0:32:1150:0,0:0,0:0,-9.63296,-103.801,-9.63296,-103.801,-103.801 0|1:52:44,8,0:44:1605:8,0:274,0:-9.3402,0,-129.082,-22.5855,-131.491,-153.73 dDocent_Contig_5738 148 . C T 81.4922 . AB=0.106977;ABP=291.473;AC=1;AF=0.0833333;AN=12;AO=23;CIGAR=1X;DP=589;DPB=589;DPRA=2.87433;EPP=52.9542;EPPR=1232.06;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.969965;PAO=0;PQA=0;PQR=0;PRO=0;QA=823;QR=22382;RO=566;RPL=0;RPP=52.9542;RPPR=1232.06;RPR=23;RUN=1;SAF=0;SAP=52.9542;SAR=23;SRF=0;SRP=1232.06;SRR=566;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:65:65,0:65:2551:0:0:0,-19.5669,-229.718 0/0:55:55,0:55:2137:0:0:0,-16.5566,-192.515 0/0:52:52,0:52:2054:0:0:0,-15.6536,-185.05 0/0:49:49,0:49:1944:0:0:0,-14.7505,-175.16 0/1:215:192,23:192:7580:23:823:-9.6721,0,-617.077 0/0:153:153,0:153:6116:0:0:0,-46.0576,-550.187 dDocent_Contig_5739 10 . T A 102482 . AB=0.592211;ABP=418.293;AC=6;AF=0.5;AN=12;AO=3330;CIGAR=1X;DP=5623;DPB=5623;DPRA=0;EPP=7234.01;EPPR=4980.03;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=132928;QR=91856;RO=2292;RPL=0;RPP=7234.01;RPPR=4980.03;RPR=3330;RUN=1;SAF=3330;SAP=7234.01;SAR=0;SRF=2292;SRP=4980.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:756:361,395:361:14483:395:15774:-1190.84,0,-1074.76 0/1:821:298,523:298:11943:523:20881:-1630.38,0,-826.837 0/1:724:298,426:298:11987:426:17030:-1313.35,0,-859.971 0/1:1037:296,741:296:11859:741:29537:-2343.52,0,-754.28 0/1:1038:543,495:543:21689:495:19769:-1465.11,0,-1637.64 0/1:1247:496,750:496:19895:750:29937:-2316.17,0,-1413.37 dDocent_Contig_5740 25 . G A 74053.9 . AB=0.110763;ABP=4624.66;AC=0;AF=0;AN=12;AO=389;CIGAR=2X;DP=3512;DPB=3537.5;DPRA=0;EPP=830.431;EPPR=1505.67;GTI=0;LEN=1;MEANALT=3.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.809769;PAIREDR=0.0419075;PAO=0;PQA=0;PQR=0;PRO=0;QA=15323;QR=26586;RO=692;RPL=0;RPP=847.713;RPPR=1505.67;RPR=389;RUN=1;SAF=387;SAP=830.431;SAR=2;SRF=692;SRP=1505.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:470:91,36,333:91:3477:36,333:1411,13052:-1045.84,-957.221,-1231.65,0,-169.255,-185.027 0|0:624:103,75,438:103:3943:75,438:2980,17030:-1368.28,-1153.96,-1454.93,0,-78.2126,-191.698 0|0:588:129,83,369:129:5005:83,369:3283,14322:-1137.72,-906.381,-1292.6,0,-141.031,-300.121 0|0:536:107,43,384:107:4110:43,384:1690,15071:-1207.16,-1100.37,-1424.78,0,-198.353,-221.751 0|0:632:135,81,400:135:5155:81,400:3161,15599:-1241.4,-1022.23,-1420.76,0,-163.101,-302.499 0|0:662:127,71,452:127:4896:71,452:2798,17691:-1416.22,-1224.27,-1604.91,0,-171.831,-265.945 dDocent_Contig_5741 41 . A G 1279.65 . AB=0.242553;ABP=138.298;AC=5;AF=0.416667;AN=12;AO=59;CIGAR=1X;DP=294;DPB=294;DPRA=0;EPP=131.127;EPPR=513.306;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.474576;PAIREDR=0.548936;PAO=0;PQA=0;PQR=0;PRO=0;QA=2356;QR=9327;RO=235;RPL=0;RPP=131.127;RPPR=513.306;RPR=59;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=235;SRP=513.306;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:45:41,4:41:1623:4:161:-1.32892,0,-132.757 0/1:56:50,6:50:1994:6:240:-5.11777,0,-162.798 0/1:44:39,5:39:1556:5:204:-5.49871,0,-127.034 0/0:59:57,2:57:2255:2:73:0,-10.8297,-196.188 0/1:37:16,21:16:649:21:843:-65.0449,0,-47.6047 0/1:53:32,21:32:1250:21:835:-59.5107,0,-96.8182 dDocent_Contig_5742 14 . G A 3647.78 . AB=0.0616397;ABP=2792.04;AC=1;AF=0.0833333;AN=12;AO=186;CIGAR=1X3M1X;DP=3790;DPB=3789.8;DPRA=0;EPP=406.904;EPPR=6901.78;GTI=0;LEN=1;MEANALT=6.2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.994624;PAIREDR=0.994964;PAO=0;PQA=0;PQR=0;PRO=0;QA=7320;QR=122005;RO=3177;RPL=0;RPP=406.904;RPPR=6901.78;RPR=186;RUN=1;SAF=186;SAP=406.904;SAR=0;SRF=3177;SRP=6901.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:455:363,60,12:363:13950:60,12:2357,481:-84.5899,0,-1127.09,-154.233,-1105.52,-1295.76 0|0:622:508,38,58:508:19549:38,58:1489,2329:-38.9908,-69.4782,-1663.01,0,-1482.54,-1587.52 0|0:725:634,49,23:634:24404:49,23:1935,920:0,-31.6223,-2020.48,-115.066,-1959.45,-2111.75 0|0:689:600,34,43:600:22972:34,43:1349,1708:0,-69.5662,-1944.47,-40.0009,-1814.09,-1912.19 0|0:705:604,0,75:604:23065:0,75:0,2972:-62.822,-244.644,-2136.94,0,-1892.33,-1869.75 0|0:594:468,5,99:468:18065:5,99:190,3963:-185.597,-310.897,-1792.94,0,-1467.99,-1453.77 dDocent_Contig_5743 9 . T C 553.376 . AB=0.0866051;ABP=1288.48;AC=2;AF=0.166667;AN=12;AO=92;CIGAR=2X2M1X;DP=3513;DPB=3513;DPRA=0.675703;EPP=202.786;EPPR=7181.9;GTI=0;LEN=1;MEANALT=2.75;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3605;QR=129324;RO=3306;RPL=0;RPP=202.786;RPPR=7181.9;RPR=92;RUN=1;SAF=92;SAP=202.786;SAR=0;SRF=3306;SRP=7181.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:437:369,18,49:369:14467:18,49:704,1919:-46.7113,-99.9101,-1284.18,0,-1131.81,-1174.94 0|0:541:497,28,14:497:19425:28,14:1107,552:0,-58.5058,-1647.04,-104.195,-1610.06,-1696.94 0|1:429:365,38,26:365:14322:38,26:1481,1024:-11.8481,0,-1166.4,-37.4809,-1093.6,-1207.5 0|0:612:585,24,3:585:22866:24,3:950,110:0,-97.8879,-1970.55,-167.116,-1968.78,-2046.07 0|0:722:719,0,0:719:28051:0,0:0,0:0,-216.441,-2522.18,-216.441,-2522.18,-2522.18 0|0:772:771,0,0:771:30193:0,0:0,0:0,-232.094,-2714.8,-232.094,-2714.8,-2714.8 dDocent_Contig_5744 15 . C T 416.372 . AB=0.118421;ABP=99.1265;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X3M1X;DP=196;DPB=196;DPRA=0;EPP=22.5536;EPPR=350.446;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.8375;PAO=0;PQA=0;PQR=0;PRO=0;QA=356;QR=6218;RO=160;RPL=0;RPP=22.5536;RPPR=350.446;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=160;SRP=350.446;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:29:23,0,6:23:909:0,6:0,228:-12.1547,-19.0784,-93.8908,0,-75.1952,-73.389 0|0:22:18,0,4:18:703:0,4:0,147:-6.96664,-12.3852,-70.191,0,-58.1773,-56.9731 0|0:29:26,0,3:26:1004:0,3:0,117:-2.18004,-10.0068,-92.4543,0,-82.8367,-81.9336 0|0:40:31,0,9:31:1198:0,9:0,338:-18.7314,-28.0633,-126.455,0,-98.7693,-96.06 0|0:44:35,4,5:35:1362:4,5:161,184:-4.48916,-1.74065,-112.478,0,-98.6409,-110.406 0|1:32:27,5,0:27:1042:5,0:195,0:-8.29037,0,-84.4481,-16.4182,-85.9532,-101.982 dDocent_Contig_5745 138 . N G 272.601 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=283;QR=0;RO=0;RPL=7;RPP=18.2106;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:160:-14.7829,-1.20412,0 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 dDocent_Contig_5747 1 . N G 74.0438 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=78;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:78:-7.4033,-0.60206,0 dDocent_Contig_5748 98 . N C 149.82 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=152;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:52:-4.93931,-0.60206,0 1/1:3:0,3:0:0:3:65:-6.06561,-0.90309,0 dDocent_Contig_5749 1 . N G 104.487 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=105;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_5750 12 . T G 1446.07 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=140;CIGAR=1M1X6M;DP=5871;DPB=5848;DPRA=0.712441;EPP=307.016;EPPR=11240.4;GTI=0;LEN=1;MEANALT=9.75;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.999614;PAO=0;PQA=0;PQR=0;PRO=0;QA=5539;QR=204781;RO=5175;RPL=0;RPP=307.016;RPPR=11240.4;RPR=140;RUN=1;SAF=140;SAP=307.016;SAR=0;SRF=5175;SRP=11240.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:840:670,49,34,48:670:26446:49,34,48:1909,1336,1922:0,-44.7955,-2206.05,-91.8115,-2110.92,-2257.58,-43.3616,-2062.47,-2109.49,-2204.92 0|0:947:829,27,61,20:829:32798:27,61,20:1052,2390,809:0,-163.096,-2854.15,-53.0305,-2665.75,-2733.85,-182.85,-2795.57,-2685.51,-2876.01 0|0:785:698,13,32,33:698:27682:13,32,33:505,1286,1338:0,-168.628,-2443.32,-104.148,-2341.27,-2373.13,-99.7789,-2336.9,-2272.42,-2368.46 0|0:1070:938,0,13,83:938:37137:0,13,83:0,527,3344:0,-282.366,-3338.81,-238.906,-3295.35,-3291.43,-6.73697,-3063.19,-3019.73,-3038.21 0|0:951:827,0,0,120:827:32682:0,0,120:0,0,4796:-146.13,-395.081,-3084.42,-395.081,-3084.42,-3084.42,0,-2689.41,-2689.41,-2653.28 0|0:1278:1213,0,0,54:1213:48036:0,0,54:0,0,2158:0,-365.149,-4318.73,-365.149,-4318.73,-4318.73,-187.338,-4141,-4141,-4124.74 dDocent_Contig_5751 98 . N T 254.947 . AB=0;ABP=0;AC=8;AF=0.666667;AN=12;AO=9;CIGAR=1X;DP=11;DPB=11;DPRA=2.25;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=260;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:1:0,0:0:0:0:0:0,0,0 1/1:3:0,3:0:0:3:74:-6.90557,-0.90309,0 1/1:1:0,1:0:0:1:36:-3.59827,-0.30103,0 0/0:1:0,0:0:0:0:0:0,0,0 1/1:3:0,3:0:0:3:96:-8.95721,-0.90309,0 1/1:2:0,2:0:0:2:54:-5.12892,-0.60206,0 dDocent_Contig_5752 64 . A T 180.756 . AB=0.12766;ABP=172.801;AC=3;AF=0.25;AN=12;AO=25;CIGAR=1X;DP=270;DPB=270;DPRA=0;EPP=57.2971;EPPR=532.85;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.36;PAIREDR=0.479508;PAO=0;PQA=0;PQR=0;PRO=0;QA=997;QR=9634;RO=244;RPL=25;RPP=57.2971;RPPR=532.85;RPR=0;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=244;SRP=532.85;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:43:42,1:42:1670:1:41:0,-8.84972,-146.436 0/1:48:41,7:41:1608:7:285:-11.5748,0,-130.513 0/1:34:30,4:30:1170:4:152:-3.81146,0,-95.3393 0/1:59:51,7:51:2011:7:279:-7.91002,0,-163.649 0/0:45:42,3:42:1658:3:120:0,-2.35904,-138.263 0/0:41:38,3:38:1517:3:120:0,-1.15492,-125.581 dDocent_Contig_5753 22 . G A 125.103 . AB=0.112782;ABP=176.222;AC=1;AF=0.0833333;AN=12;AO=24;CIGAR=1X;DP=770;DPB=770;DPRA=1.23188;EPP=55.1256;EPPR=1622.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.916667;PAIREDR=0.94504;PAO=0;PQA=0;PQR=0;PRO=0;QA=961;QR=29544;RO=746;RPL=0;RPP=55.1256;RPPR=1622.93;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=746;SRP=1622.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:100:100,0:100:3946:0:0:0,-30.103,-355.145 0/1:133:118,15:118:4708:15:597:-14.0331,0,-383.591 0/0:103:97,6:97:3792:6:244:0,-8.66726,-318.946 0/0:189:186,3:186:7386:3:120:0,-45.707,-653.195 0/0:110:110,0:110:4346:0:0:0,-33.1133,-391.093 0/0:135:135,0:135:5366:0:0:0,-40.639,-482.781 dDocent_Contig_5754 98 . N A 1668.86 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=58;CIGAR=1X;DP=58;DPB=58;DPRA=0;EPP=128.956;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1839;QR=0;RO=0;RPL=58;RPP=128.956;RPPR=0;RPR=0;RUN=1;SAF=58;SAP=128.956;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:7:0,7:0:0:7:212:-19.3791,-2.10721,0 1/1:21:0,21:0:0:21:661:-59.7897,-6.32163,0 ./.:.:.:.:.:.:.:. 1/1:30:0,30:0:0:30:966:-87.24,-9.0309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5755 106 . N A 1081.34 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=34;CIGAR=2X1M1I2M;DP=134;DPB=140.8;DPRA=1.475;EPP=76.8404;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1192;QR=0;RO=0;RPL=0;RPP=76.8404;RPPR=0;RPR=34;RUN=1;SAF=0;SAP=76.8404;SAR=34;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:23:0,5:0:0:5:163:-14.6602,-1.50515,0 1|1:16:0,0:0:0:0:0:0,0,0 1|1:23:0,7:0:0:7:251:-22.5822,-2.10721,0 1|1:28:0,2:0:0:2:72:-6.47742,-0.60206,0 1|1:17:0,10:0:0:10:351:-31.5735,-3.0103,0 1|1:27:0,10:0:0:10:355:-31.9368,-3.0103,0 dDocent_Contig_5756 54 . G C 60843.7 . AB=0.791457;ABP=1471.32;AC=7;AF=0.583333;AN=12;AO=1939;CIGAR=1X;DP=2372;DPB=2372;DPRA=0;EPP=4213.5;EPPR=936.743;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.996906;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=75082;QR=16634;RO=430;RPL=1939;RPP=4213.5;RPPR=936.743;RPR=0;RUN=1;SAF=1939;SAP=4213.5;SAR=0;SRF=430;SRP=936.743;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:324:61,263:61:2387:263:10108:-811.738,0,-117.472 0/1:410:59,350:59:2283:350:13607:-1100.67,0,-82.4545 0/1:206:30,176:30:1140:176:6805:-550.254,0,-40.8627 1/1:382:17,364:17:674:364:14112:-1208.31,-53.8619,0 0/1:503:143,360:143:5500:360:13947:-1103.05,0,-343.495 0/1:547:120,426:120:4650:426:16503:-1319.57,0,-253.755 dDocent_Contig_5757 38 . T C 92019.6 . AB=0.471121;ABP=43.0196;AC=7;AF=0.583334;AN=12;AO=2602;CIGAR=1X1M;DP=5523;DPB=5523;DPRA=0;EPP=5653.18;EPPR=2593.58;GTI=0;LEN=1;MEANALT=3.66667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=102817;QR=47005;RO=1193;RPL=0;RPP=5653.18;RPPR=2593.58;RPR=2602;RUN=1;SAF=2602;SAP=5653.18;SAR=0;SRF=1193;SRP=2593.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:1032:136,132,234,530:136:5372:132,234,530:5207,9252,20916:-1999.2,-1611.74,-2014.01,-1278.82,-1292.44,-1650.4,-319.299,-332.912,0,-601.767 0|1:1358:374,123,200,660:374:14703:123,200,660:4798,7940,26007:-2026.81,-1745.04,-2917.29,-1485.8,-2300.73,-2634.88,0,-814.929,-555.689,-1010.6 1|1:750:117,122,118,392:117:4623:122,118,392:4815,4670,15489:-1255,-894.057,-1237.73,-905.917,-890.152,-1250.79,-15.7651,0,-11.8601,-278.158 0|1:1130:119,57,257,695:119:4624:57,257,695:2238,10184,27528:-2688.02,-2539.79,-2902.54,-1885.67,-2081.53,-2188.21,-458.273,-654.131,0,-628.964 0|1:563:237,191,41,94:237:9384:191,41,94:7565,1608,3693:-551.276,0,-714.808,-490.396,-640.08,-1250.36,-318.912,-468.596,-958.99,-1062.92 0|1:690:210,197,52,231:210:8299:197,52,231:7739,2070,9184:-692.887,-119.629,-743.213,-585.673,-632.085,-1252.91,0,-46.4131,-512.457,-613.35 dDocent_Contig_5758 161 . C T 1354.19 . AB=0.258929;ABP=116.082;AC=4;AF=0.333333;AN=12;AO=58;CIGAR=1X;DP=340;DPB=340;DPRA=0.965517;EPP=128.956;EPPR=598.117;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.793103;PAIREDR=0.829787;PAO=0;PQA=0;PQR=0;PRO=0;QA=2319;QR=11106;RO=282;RPL=58;RPP=128.956;RPPR=606.71;RPR=0;RUN=1;SAF=0;SAP=128.956;SAR=58;SRF=1;SRP=606.71;SRR=281;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:72:57,15:57:2256:15:595:-32.2147,0,-181.547 0/1:57:38,19:38:1493:19:764:-51.9235,0,-117.464 0/1:47:35,12:35:1394:12:486:-29.9429,0,-111.571 0/1:48:36,12:36:1399:12:474:-28.5593,0,-111.72 0/0:56:56,0:56:2199:0:0:0,-16.8577,-198.096 0/0:60:60,0:60:2365:0:0:0,-18.0618,-213.025 dDocent_Contig_5759 116 . T C 209.376 . AB=0.153061;ABP=105.468;AC=4;AF=0.333333;AN=12;AO=16;CIGAR=1X;DP=141;DPB=141;DPRA=0.928;EPP=37.7539;EPPR=274.444;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5625;PAIREDR=0.92;PAO=0;PQA=0;PQR=0;PRO=0;QA=649;QR=5008;RO=125;RPL=16;RPP=37.7539;RPPR=274.444;RPR=0;RUN=1;SAF=0;SAP=37.7539;SAR=16;SRF=0;SRP=274.444;SRR=125;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:14,2:14:566:2:82:-2.9632,0,-46.4652 0/1:18:15,3:15:608:3:121:-5.86166,0,-49.6394 0/0:18:17,1:17:677:1:41:0,-1.32397,-57.161 0/1:36:33,3:33:1328:3:123:-0.627708,0,-108.944 0/0:25:25,0:25:1012:0:0:0,-7.52575,-91.3734 0/1:28:21,7:21:817:7:282:-17.3238,0,-65.4056 dDocent_Contig_5760 115 . T A 123.931 . AB=0.219512;ABP=31.0276;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=513;DPB=513;DPRA=0.520885;EPP=26.8965;EPPR=1084.4;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=348;QR=16472;RO=498;RPL=0;RPP=26.8965;RPPR=1084.4;RPR=11;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=1084.4;SRR=498;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:32,9:32:1061:9:285:-13.615,0,-83.4476 0/0:65:63,2:63:2067:2:63:0,-13.5833,-180.313 0/0:124:123,0:123:4102:0:0:0,-37.0267,-369.321 0/0:109:108,0:108:3558:0:0:0,-32.5112,-320.127 0/0:98:96,0:96:3172:0:0:0,-28.8989,-285.37 0/0:76:76,0:76:2512:0:0:0,-22.8783,-226.339 dDocent_Contig_5761 109 . C A 50.6892 . AB=0.125;ABP=90.9549;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=162;DPB=162;DPRA=2.17647;EPP=29.068;EPPR=328.731;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.826667;PAO=0;PQA=0;PQR=0;PRO=0;QA=434;QR=5287;RO=150;RPL=0;RPP=29.068;RPPR=328.731;RPR=12;RUN=1;SAF=0;SAP=29.068;SAR=12;SRF=0;SRP=328.731;SRR=150;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:679:0:0:0,-5.71957,-61.4392 0/1:28:25,3:25:876:3:110:-1.83216,0,-70.7275 0/0:39:36,3:36:1283:3:108:0,-1.66508,-105.699 0/0:18:18,0:18:630:0:0:0,-5.41854,-57.0253 0/0:14:14,0:14:502:0:0:0,-4.21442,-45.5172 0/1:44:38,6:38:1317:6:216:-6.54519,0,-105.581 dDocent_Contig_5762 8 . C T 17423.7 . AB=0.181518;ABP=1337.75;AC=2;AF=0.166667;AN=12;AO=275;CIGAR=1X3M1X2M1X1M;DP=1515;DPB=1515;DPRA=0;EPP=600.165;EPPR=689.196;GTI=0;LEN=1;MEANALT=10.5;MQM=59.8982;MQMR=60;NS=6;NUMALT=5;ODDS=4.44089e-16;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10751;QR=12334;RO=316;RPL=0;RPP=600.165;RPPR=689.196;RPR=275;RUN=1;SAF=275;SAP=600.165;SAR=0;SRF=316;SRP=689.196;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:175:49,25,14,8,7,56:49:1919:25,14,8,7,56:993,549,316,266,2131:-155.613,-88.6058,-238.882,-125.293,-201.338,-278.879,-144.367,-220.411,-257.097,-299.758,-148.877,-224.921,-261.607,-280.68,-304.569,0,-76.0445,-112.731,-131.804,-136.315,-140.943 1|0:317:51,97,17,9,26,100:51:1981:97,17,9,26,100:3805,677,351,1039,3851:-442.972,-145.4,-278.976,-402.868,-252.719,-560.525,-429.522,-279.373,-536.84,-589.586,-374.774,-224.625,-482.093,-508.746,-529.721,-150.15,0,-257.468,-284.121,-229.374,-282.821 0|0:253:98,32,18,13,8,68:98:3846:32,18,13,8,68:1251,721,524,312,2644:-182.321,-108.986,-415.659,-152.967,-366.439,-463.855,-168.642,-382.113,-426.094,-481.034,-186.906,-400.377,-444.357,-460.031,-500.802,0,-213.473,-257.453,-273.127,-291.391,-295.836 1|0:344:35,66,40,9,31,148:35:1382:66,40,9,31,148:2555,1606,358,1180,5783:-548.747,-349.409,-443.262,-428.778,-332.626,-530.458,-530.913,-434.761,-514.13,-641.925,-468.389,-372.237,-451.606,-553.74,-572.778,-96.1525,0,-79.3687,-181.505,-118.983,-165.322 0|0:193:50,17,40,0,22,56:50:1917:17,40,0,22,56:660,1599,0,878,2197:-159.858,-120.709,-272.913,-45.4985,-148.62,-190.779,-174.909,-278.03,-202.82,-332.23,-105.167,-208.288,-133.077,-262.488,-255.865,0,-103.12,-27.9088,-157.319,-87.577,-140.461 0|0:233:33,38,53,0,24,67:33:1289:38,53,0,24,67:1487,2111,0,948,2633:-264.08,-151.75,-246.274,-103.952,-87.6508,-193.961,-274.014,-257.713,-209.916,-379.978,-196.776,-180.475,-132.677,-302.739,-295.514,-64.0984,-47.7973,0,-170.061,-92.823,-149.892 dDocent_Contig_5763 1 . N G 76.8682 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 dDocent_Contig_5764 43 . T A 47378.8 . AB=0.570128;ABP=120.266;AC=6;AF=0.5;AN=12;AO=1565;CIGAR=1X9M;DP=2745;DPB=2761;DPRA=0;EPP=3366.71;EPPR=684.659;GTI=0;LEN=1;MEANALT=4;MQM=59.9968;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.996441;PAO=0;PQA=0;PQR=0;PRO=0;QA=61828;QR=43869;RO=1124;RPL=1561;RPP=3366.71;RPPR=684.659;RPR=4;RUN=1;SAF=1565;SAP=3401.36;SAR=0;SRF=1124;SRP=2443.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:417:150,0,266:150:5877:0,266:0,10489:-817.751,-862.906,-1346.16,0,-483.272,-403.198 0|1:517:192,34,288:192:7418:34,288:1352,11378:-878.398,-824.878,-1423.84,0,-497.884,-522.507 0|1:293:83,6,203:83:3241:6,203:237,8049:-637.542,-643.025,-907.635,0,-246.95,-205.344 0|1:321:151,0,168:151:5884:0,168:0,6606:-497.855,-543.311,-1026.91,0,-483.599,-433.026 0|1:605:272,0,329:272:10678:0,329:0,12953:-983.644,-1065.52,-1943.72,0,-878.261,-779.223 0|1:592:276,0,311:276:10771:0,311:0,12353:-933.917,-1017,-1902.36,0,-885.471,-791.851 dDocent_Contig_5765 98 . N A 7229.87 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=237;CIGAR=1X;DP=237;DPB=237;DPRA=0;EPP=517.649;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=8004;QR=0;RO=0;RPL=237;RPP=517.649;RPPR=0;RPR=0;RUN=1;SAF=237;SAP=517.649;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:34:0,34:0:0:34:1143:-103.172,-10.235,0 1/1:62:0,62:0:0:62:2122:-191.255,-18.6639,0 1/1:43:0,43:0:0:43:1469:-132.505,-12.9443,0 1/1:85:0,85:0:0:85:2837:-255.578,-25.5876,0 1/1:12:0,12:0:0:12:399:-36.2316,-3.61236,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 dDocent_Contig_5766 7 . A C 1938.69 . AB=0.236181;ABP=243.618;AC=3;AF=0.25;AN=12;AO=103;CIGAR=1X;DP=677;DPB=677;DPRA=2.94884;EPP=226.672;EPPR=1247.26;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3877;QR=21840;RO=573;RPL=0;RPP=226.672;RPPR=1247.26;RPR=103;RUN=1;SAF=103;SAP=226.672;SAR=0;SRF=573;SRP=1247.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:43:43,0:43:1631:0:0:0,-12.9443,-147.059 0/1:85:69,16:69:2610:16:597:-28.4726,0,-209.504 0/0:116:109,7:109:4175:7:269:0,-10.3447,-351.258 0/0:120:118,2:118:4478:2:76:0,-28.9088,-395.876 0/1:141:97,43:97:3704:43:1603:-102.228,0,-291.177 0/1:172:137,35:137:5242:35:1332:-68.3903,0,-420.01 dDocent_Contig_5767 16 . C A 2344 . AB=0.141713;ABP=1395.65;AC=4;AF=0.333333;AN=12;AO=217;CIGAR=1X;DP=1852;DPB=1852;DPRA=0;EPP=474.22;EPPR=3549.02;GTI=0;LEN=1;MEANALT=1.33333;MQM=58.9032;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996938;PAO=0;PQA=0;PQR=0;PRO=0;QA=8418;QR=64893;RO=1633;RPL=0;RPP=474.22;RPPR=3549.02;RPR=217;RUN=1;SAF=217;SAP=474.22;SAR=0;SRF=1633;SRP=3549.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:213:198,14:198:7899:14:534:0,-15.802,-662.099 0/1:309:270,39:270:10706:39:1469:-39.4415,0,-869.823 0/1:146:107,39:107:4255:39:1541:-94.988,0,-338.961 0/1:395:333,62:333:13289:62:2390:-96.3701,0,-1076.12 0/1:399:362,37:362:14340:37:1476:-10.822,0,-1169.41 0/0:390:363,26:363:14404:26:1008:0,-26.4902,-1204.26 dDocent_Contig_5768 39 . C A 255.626 . AB=0.0509611;ABP=3920.86;AC=1;AF=0.0833333;AN=12;AO=128;CIGAR=1X1M1X13M;DP=3779;DPB=3720.38;DPRA=1.41439;EPP=280.959;EPPR=7066.82;GTI=0;LEN=1;MEANALT=9.25;MQM=60;MQMR=59.9712;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.998773;PAO=0;PQA=0;PQR=0;PRO=0;QA=5087;QR=127241;RO=3261;RPL=0;RPP=280.959;RPPR=7066.82;RPR=128;RUN=1;SAF=128;SAP=280.959;SAR=0;SRF=3261;SRP=7084.18;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:768:633,65,23,40:633:24594:65,23,40:2573,836,1578:-21.2108,0,-2001.3,-143.515,-1952.62,-2157.45,-81.9387,-1891.05,-2034.55,-2090.76 0|0:671:577,14,57,18:577:22537:14,57,18:551,2137,709:-1.32587,-129.691,-1978.21,0,-1807.42,-1835.58,-116.69,-1924.1,-1794.42,-1964.01 0|0:555:482,14,27,26:482:18835:14,27,26:559,976,1033:0,-99.0517,-1643.28,-65.4649,-1567.85,-1605.77,-60.0547,-1562.46,-1528.86,-1600.68 0|0:798:655,35,37,63:655:25490:35,37,63:1404,1353,2488:-7.55851,-89.0449,-2173.32,-94.1941,-2073.31,-2177.85,0,-1979.13,-1984.27,-2075.85 0|0:414:407,0,0,1:407:15926:0,0,1:0,0,25:0,-122.519,-1427.21,-122.519,-1427.21,-1427.21,-120.576,-1425.26,-1425.26,-1424.96 0|0:573:507,0,11,46:507:19859:0,11,46:0,394,1841:0,-152.622,-1785.6,-120.508,-1753.49,-1750.17,-0.900177,-1633.95,-1601.83,-1620.1 dDocent_Contig_5769 125 . T G 33.8035 . AB=0.128205;ABP=49.8362;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=174;DPB=174;DPRA=1.44444;EPP=13.8677;EPPR=367.818;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.809524;PAO=0;PQA=0;PQR=0;PRO=0;QA=181;QR=6714;RO=168;RPL=5;RPP=13.8677;RPPR=367.818;RPR=0;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=367.818;SRR=168;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:634:0:0:0,-4.81648,-57.3962 0/0:32:32,0:32:1294:0:0:0,-9.63296,-116.721 0/0:18:18,0:18:730:0:0:0,-5.41854,-66.0245 0/0:38:37,0:37:1445:0:0:0,-11.1381,-129.889 0/0:31:31,0:31:1247:0:0:0,-9.33193,-112.501 0/1:39:34,5:34:1364:5:181:-4.90305,0,-111.28 dDocent_Contig_5771 98 . N G 553.917 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=18;CIGAR=2X;DP=18;DPB=18;DPRA=0;EPP=42.0968;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=605;QR=0;RO=0;RPL=18;RPP=42.0968;RPPR=0;RPR=0;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:17:0,17:0:0:17:573:-51.8902,-5.11751,0 .:.:.:.:.:.:.:. dDocent_Contig_5772 29 . A G 82.0301 . AB=0.133333;ABP=90.593;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=193;DPB=193;DPRA=0.989691;EPP=26.8965;EPPR=364.238;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.545455;PAIREDR=0.510989;PAO=0;PQA=0;PQR=0;PRO=0;QA=389;QR=7219;RO=182;RPL=0;RPP=26.8965;RPPR=398.218;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=178;SRP=364.238;SRR=4;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:20,1:20:799:1:18:0,-4.52166,-70.4257 0/0:37:37,0:37:1465:0:0:0,-11.1381,-132.106 0/1:44:37,7:37:1478:7:251:-9.67684,0,-120.021 0/1:31:28,3:28:1093:3:120:-1.85576,0,-89.3264 0/0:29:29,0:29:1154:0:0:0,-8.72987,-104.137 0/0:31:31,0:31:1230:0:0:0,-9.33193,-110.975 dDocent_Contig_5773 11 . A G 8721.91 . AB=0.352683;ABP=175.113;AC=5;AF=0.416667;AN=12;AO=328;CIGAR=1X;DP=1068;DPB=1068;DPRA=0;EPP=715.253;EPPR=1609.9;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13079;QR=29757;RO=740;RPL=0;RPP=715.253;RPPR=1609.9;RPR=328;RUN=1;SAF=328;SAP=715.253;SAR=0;SRF=740;SRP=1609.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:121:96,25:96:3832:25:1002:-54.052,0,-308.46 0/1:194:167,27:167:6724:27:1094:-40.3441,0,-546.437 0/1:115:103,12:103:4101:12:489:-9.74286,0,-334.442 0/0:155:149,6:149:6012:6:239:0,-24.7752,-518.95 0/1:248:104,144:104:4199:144:5728:-440.668,0,-303.201 0/1:235:121,114:121:4889:114:4527:-336.605,0,-369.139 dDocent_Contig_5774 37 . T G 37382.2 . AB=0.771654;ABP=979.865;AC=6;AF=0.5;AN=12;AO=1176;CIGAR=1X;DP=1524;DPB=1524;DPRA=0;EPP=2556.66;EPPR=754.34;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.989796;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=46782;QR=13745;RO=346;RPL=0;RPP=2556.66;RPPR=754.34;RPR=1176;RUN=1;SAF=1176;SAP=2556.66;SAR=0;SRF=346;SRP=754.34;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:150:22,128:22:893:128:5111:-414.712,0,-35.5223 0/1:199:25,174:25:991:174:6926:-563.124,0,-29.5713 0/1:258:75,181:75:3021:181:7210:-571.093,0,-194.498 0/1:255:31,224:31:1261:224:8905:-724.188,0,-36.992 0/1:338:99,239:99:3878:239:9525:-754.918,0,-247.272 0/1:324:94,230:94:3701:230:9105:-721.403,0,-235.574 dDocent_Contig_5775 12 . C T 1694.32 . AB=0.179337;ABP=461.183;AC=5;AF=0.416667;AN=12;AO=101;CIGAR=1X;DP=642;DPB=642;DPRA=0;EPP=222.329;EPPR=1175.61;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.970297;PAIREDR=0.996296;PAO=0;PQA=0;PQR=0;PRO=0;QA=4046;QR=21649;RO=540;RPL=0;RPP=222.329;RPPR=1175.61;RPR=101;RUN=1;SAF=101;SAP=222.329;SAR=0;SRF=540;SRP=1175.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:55:44,11:44:1749:11:438:-23.2147,0,-141.064 0/1:107:95,12:95:3778:12:486:-11.8811,0,-307.805 0/1:180:140,40:140:5600:40:1590:-89.1455,0,-449.625 0/1:88:70,18:70:2827:18:724:-38.9926,0,-228.037 0/1:83:72,11:72:2904:11:445:-15.4202,0,-236.464 0/0:129:119,9:119:4791:9:363:0,-5.62726,-398.069 dDocent_Contig_5776 9 . T C 14533.7 . AB=0.187678;ABP=3578.48;AC=6;AF=0.5;AN=12;AO=792;CIGAR=1X;DP=4220;DPB=4220;DPRA=0;EPP=1722.82;EPPR=7433.79;GTI=0;LEN=1;MEANALT=1.66667;MQM=59.7715;MQMR=59.993;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=0.084596;PAIREDR=0.100526;PAO=0;PQA=0;PQR=0;PRO=0;QA=30469;QR=130667;RO=3422;RPL=0;RPP=1722.82;RPPR=7433.79;RPR=792;RUN=1;SAF=792;SAP=1722.82;SAR=0;SRF=3422;SRP=7433.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:653:538,112:538:20538:112:4326:-191.553,0,-1651.37 0/1:950:774,175:774:29539:175:6718:-318.438,0,-2370.7 0/1:507:385,122:385:14804:122:4686:-269.15,0,-1179.03 0/1:932:767,165:767:29310:165:6358:-291.571,0,-2355.55 0/1:384:316,67:316:12029:67:2567:-109.764,0,-966.448 0/1:794:642,151:642:24447:151:5814:-284.112,0,-1959.77 dDocent_Contig_5777 30 . T C 1346.4 . AB=0.0431655;ABP=254.979;AC=0;AF=0;AN=12;AO=7;CIGAR=1X2M1X2M1X2M1X5M1X2M1X2M1X;DP=510;DPB=510.136;DPRA=0;EPP=18.2106;EPPR=306.43;GTI=0;LEN=1;MEANALT=7.66667;MQM=19;MQMR=60;NS=6;NUMALT=6;ODDS=0;PAIRED=0;PAIREDR=0.718101;PAO=0;PQA=0;PQR=0;PRO=0;QA=133;QR=13172;RO=337;RPL=0;RPP=18.2106;RPPR=268.542;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=330;SRP=675.258;SRR=7;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:52:39,0,1,0,3,6,0:39:1507:0,1,0,3,6,0:0,15,0,122,234,0:-7.50432,-19.2445,-143.02,-18.4816,-142.241,-141.94,-19.2445,-143.02,-142.241,-143.02,-9.17259,-132.955,-132.176,-132.955,-132.052,0,-123.785,-123.007,-123.785,-113.72,-121.979,-19.2445,-143.02,-142.241,-143.02,-132.955,-123.785,-143.02 0|0:87:55,0,5,0,0,15,0:55:2136:0,5,0,0,15,0:0,105,0,0,565,0:-29.772,-46.3286,-221.866,-39.7593,-215.279,-213.774,-46.3286,-221.866,-215.279,-221.866,-46.3286,-221.866,-215.279,-221.866,-221.866,0,-175.572,-168.988,-175.572,-175.572,-171.057,-46.3286,-221.866,-215.279,-221.866,-221.866,-175.572,-221.866 0|0:38:27,3,0,3,0,3,0:27:1059:3,0,3,0,3,0:118,0,123,0,115,0:-2.03853,-0.595735,-86.8042,-10.1663,-87.7073,-97.2721,0,-77.5528,-87.1178,-86.2147,-10.1663,-87.7073,-97.2721,-87.1178,-97.2721,-0.723247,-78.2686,-87.8334,-77.679,-87.8334,-86.9303,-10.1663,-87.7073,-97.2721,-87.1178,-97.2721,-87.8334,-97.2721 0|0:83:62,0,1,0,0,4,0:62:2430:0,1,0,0,4,0:0,13,0,0,157,0:0,-18.6639,-218.555,-18.0659,-217.95,-217.649,-18.6639,-218.555,-217.95,-218.555,-18.6639,-218.555,-217.95,-218.555,-218.555,-5.72999,-205.641,-205.037,-205.641,-205.641,-204.437,-18.6639,-218.555,-217.95,-218.555,-218.555,-205.641,-218.555 0|0:99:61,0,0,0,0,16,8:61:2389:0,0,0,0,16,8:0,0,0,0,587,327:-29.6151,-47.9779,-244.437,-47.9779,-244.437,-244.437,-47.9779,-244.437,-244.437,-244.437,-47.9779,-244.437,-244.437,-244.437,-244.437,0,-196.467,-196.467,-196.467,-196.467,-191.65,-20.9811,-217.451,-217.451,-217.451,-217.451,-169.48,-215.042 0|0:151:93,0,0,0,0,33,0:93:3651:0,0,0,0,33,0:0,0,0,0,1254,0:-74.843,-102.839,-403.121,-102.839,-403.121,-403.121,-102.839,-403.121,-403.121,-403.121,-102.839,-403.121,-403.121,-403.121,-403.121,0,-300.289,-300.289,-300.289,-300.289,-290.355,-102.839,-403.121,-403.121,-403.121,-403.121,-300.289,-403.121 dDocent_Contig_5778 22 . A T 440.171 . AB=0.103896;ABP=842.496;AC=1;AF=0.0833333;AN=12;AO=137;CIGAR=1X;DP=4095;DPB=4095;DPRA=0.778495;EPP=300.502;EPPR=8597.7;GTI=0;LEN=1;MEANALT=1;MQM=59.9708;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5424;QR=157197;RO=3958;RPL=0;RPP=300.502;RPPR=8597.7;RPR=137;RUN=1;SAF=137;SAP=300.502;SAR=0;SRF=3958;SRP=8597.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:506:493,13:493:19481:13:519:0,-105.265,-1704.66 0/1:616:552,64:552:22000:64:2565:-45.5399,0,-1792.71 0/0:604:593,11:593:23640:11:449:0,-141.056,-2084.79 0/0:716:668,48:668:26479:48:1881:0,-46.0453,-2211.33 0/0:816:815,1:815:32352:1:10:0,-244.64,-2907.79 0/0:837:837,0:837:33245:0:0:0,-251.962,-2989.09 dDocent_Contig_5779 10 . T A 22249.2 . AB=0.223092;ABP=2979.43;AC=6;AF=0.5;AN=12;AO=997;CIGAR=1X;DP=4469;DPB=4469;DPRA=0;EPP=2167.97;EPPR=7540.19;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999712;PAO=0;PQA=0;PQR=0;PRO=0;QA=39812;QR=139221;RO=3471;RPL=0;RPP=2167.97;RPPR=7540.19;RPR=997;RUN=1;SAF=997;SAP=2167.97;SAR=0;SRF=3471;SRP=7540.19;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:694:489,205:489:19640:205:8228:-531.142,0,-1556.98 0/1:736:645,91:645:25829:91:3644:-106.425,0,-2100.72 0/1:672:507,165:507:20409:165:6610:-392.303,0,-1632.72 0/1:928:781,146:781:31302:146:5827:-244.979,0,-2535.02 0/1:693:504,189:504:20198:189:7569:-472.199,0,-1607.45 0/1:746:545,201:545:21843:201:7934:-489.096,0,-1739.37 dDocent_Contig_5780 32 . T A 414.917 . AB=0.228916;ABP=55.989;AC=1;AF=0.0833333;AN=12;AO=37;CIGAR=1X;DP=1013;DPB=1013;DPRA=0.516467;EPP=83.3548;EPPR=2122.37;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1465;QR=38751;RO=976;RPL=0;RPP=83.3548;RPPR=2122.37;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=976;SRP=2122.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:150:141,9:141:5631:9:356:0,-12.7542,-474.208 0/1:83:64,19:64:2510:19:752:-43.0145,0,-201.075 0/0:112:103,9:103:4132:9:357:0,-1.22385,-339.358 0/0:286:286,0:286:11331:0:0:0,-86.0946,-1019.06 0/0:93:93,0:93:3689:0:0:0,-27.9958,-332.029 0/0:289:289,0:289:11458:0:0:0,-86.9977,-1030.46 dDocent_Contig_5781 95 . C A 82144.4 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=2754;CIGAR=1X2M2X;DP=2760;DPB=2762.6;DPRA=0;EPP=5983.25;EPPR=0;GTI=0;LEN=1;MEANALT=1.83333;MQM=44.9412;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.126362;PAIREDR=0;PAO=8;PQA=51;PQR=59;PRO=3;QA=92807;QR=0;RO=0;RPL=2754;RPP=5983.25;RPPR=0;RPR=0;RUN=1;SAF=2754;SAP=5983.25;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:210:0,209:0:0:209:7055:-625.077,-62.9153,0 1|1:362:0,361:0:0:361:12165:-1078.87,-108.672,0 1|1:228:0,228:0:0:228:7701:-679.773,-68.6348,0 1|1:381:0,381:0:0:381:12784:-1133.28,-114.692,0 1|1:688:0,686:0:0:686:23106:-2044.18,-206.507,0 1|1:891:0,889:0:0:889:29996:-2652.48,-267.616,0 dDocent_Contig_5782 31 . C T 1970.64 . AB=0.00609756;ABP=350.499;AC=0;AF=0;AN=12;AO=13;CIGAR=8M1X1M;DP=836;DPB=811.4;DPRA=1.43534;EPP=31.2394;EPPR=1499.15;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.966618;PAO=0;PQA=0;PQR=0;PRO=0;QA=501;QR=27159;RO=689;RPL=0;RPP=31.2394;RPPR=1499.15;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=689;SRP=1499.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:93:74,19,0:74:2920:19,0:740,0:-38.9288,0,-234.931,-61.205,-240.651,-301.466 0|0:149:114,34,0:114:4464:34,0:1304,0:-72.7081,0,-356.823,-107.026,-367.058,-474.079 0|0:116:107,8,0:107:4228:8,0:313,0:0,-6.27182,-352.019,-32.2102,-354.428,-380.161 0|0:164:124,36,1:124:4894:36,1:1404,18:-78.1874,0,-391.975,-114.201,-401.495,-516.592 0|0:145:124,17,0:124:4889:17,0:633,0:-14.4614,0,-397.124,-51.7891,-402.241,-454.044 0|0:169:146,9,12:146:5764:9,12:340,483:0,-16.097,-487.663,-4.13307,-450.565,-474.814 dDocent_Contig_5783 9 . T C 587.662 . AB=0.131443;ABP=460.788;AC=1;AF=0.0833333;AN=12;AO=74;CIGAR=1X;DP=2408;DPB=2408;DPRA=0;EPP=163.699;EPPR=5071.23;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.999572;PAO=0;PQA=0;PQR=0;PRO=0;QA=2858;QR=89291;RO=2334;RPL=0;RPP=163.699;RPPR=5071.23;RPR=74;RUN=1;SAF=74;SAP=163.699;SAR=0;SRF=2334;SRP=5071.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:223:219,4:219:8379:4:156:0,-52.7124,-739.461 0/1:388:337,51:337:12865:51:1965:-60.2891,0,-1040.49 0/0:233:227,6:227:8665:6:233:0,-48.7999,-758.265 0/0:408:403,5:403:15421:5:194:0,-104.987,-1369.32 0/0:537:536,1:536:20540:1:39:0,-157.757,-1843.6 0/0:619:612,7:612:23421:7:271:0,-161.581,-2081.8 dDocent_Contig_5785 8 . C T 295.568 . AB=0.113043;ABP=451.712;AC=3;AF=0.25;AN=12;AO=66;CIGAR=1X;DP=823;DPB=823;DPRA=0;EPP=146.327;EPPR=1642.47;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.893939;PAIREDR=0.858278;PAO=0;PQA=0;PQR=0;PRO=0;QA=2530;QR=29067;RO=755;RPL=0;RPP=146.327;RPPR=1642.47;RPR=66;RUN=1;SAF=66;SAP=146.327;SAR=0;SRF=755;SRP=1642.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:108:99,7:99:3801:7:270:0,-7.62837,-317.525 0/0:198:185,13:185:7125:13:487:0,-15.4345,-596.924 0/1:103:94,9:94:3634:9:344:-0.311383,0,-296.165 0/0:172:165,7:165:6356:7:263:0,-27.7484,-547.922 0/1:128:113,15:113:4361:15:583:-14.2814,0,-354.017 0/1:114:99,15:99:3790:15:583:-18.4958,0,-306.886 dDocent_Contig_5786 9 . T C 314.063 . AB=0.16;ABP=153.624;AC=3;AF=0.25;AN=12;AO=32;CIGAR=1X;DP=347;DPB=347;DPRA=0.636145;EPP=72.4974;EPPR=678.338;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.15625;PAIREDR=0.434084;PAO=0;PQA=0;PQR=0;PRO=0;QA=1191;QR=11873;RO=311;RPL=0;RPP=72.4974;RPPR=678.338;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=311;SRP=678.338;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:27:23,4:23:878:4:144:-5.18246,0,-71.2104 0/0:62:57,5:57:2193:5:189:0,-1.2886,-180.218 0/1:57:49,8:49:1870:8:303:-10.4691,0,-151.39 0/1:66:54,12:54:2083:12:450:-20.9766,0,-167.832 0/0:52:48,3:48:1817:3:105:0,-5.93883,-153.975 0/0:83:80,0:80:3032:0:0:0,-24.0824,-272.651 dDocent_Contig_5787 18 . G A 32.3625 . AB=0.0952381;ABP=301.846;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=637;DPB=637;DPRA=0.983607;EPP=46.4397;EPPR=1342.81;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996759;PAO=0;PQA=0;PQR=0;PRO=0;QA=766;QR=24080;RO=617;RPL=0;RPP=46.4397;RPPR=1342.81;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=617;SRP=1342.81;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:75:75,0:75:2962:0:0:0,-22.5772,-266.696 0/0:130:130,0:130:5060:0:0:0,-39.1339,-455.295 0/0:94:94,0:94:3676:0:0:0,-28.2968,-330.879 0/0:128:128,0:128:4983:0:0:0,-38.5318,-448.383 0/1:81:73,8:73:2829:8:311:-3.97002,0,-230.351 0/1:129:117,12:117:4570:12:455:-2.46285,0,-372.432 dDocent_Contig_5788 44 . T A 274.881 . AB=0.127778;ABP=219.627;AC=1;AF=0.0833333;AN=12;AO=33;CIGAR=2X;DP=1771;DPB=1771;DPRA=0.760437;EPP=74.6689;EPPR=5.88894;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1325;QR=68832;RO=1738;RPL=33;RPP=74.6689;RPPR=5.88894;RPR=0;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=1738;SRP=3777.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:272:272,0:272:10761:0:0:0,-81.8802,-967.822 0|0:259:259,0:259:10271:0:0:0,-77.9668,-923.762 0|0:257:250,7:250:9874:7:282:0,-51.6117,-862.322 0|0:475:475,0:475:18837:0:0:0,-142.989,-1693.86 0|1:180:157,23:157:6226:23:921:-29.011,0,-505.937 0|0:328:325,3:325:12863:3:122:0,-87.3653,-1145.44 dDocent_Contig_5789 98 . N T 131.468 . AB=0;ABP=0;AC=4;AF=0.666667;AN=6;AO=4;CIGAR=1X;DP=5;DPB=5;DPRA=2;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=132;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:98:-9.14405,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 0/0:1:0,0:0:0:0:0:0,0,0 ./.:.:.:.:.:.:.:. dDocent_Contig_5790 25 . T A 77.9276 . AB=0.12963;ABP=67.3502;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=279;DPB=279;DPRA=1.42331;EPP=26.8965;EPPR=584.965;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.363636;PAIREDR=0.511194;PAO=0;PQA=0;PQR=0;PRO=0;QA=443;QR=10756;RO=268;RPL=0;RPP=26.8965;RPPR=584.965;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=268;SRP=584.965;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:1168:0:0:0,-8.72987,-105.398 0/0:30:30,0:30:1217:0:0:0,-9.0309,-109.8 0/1:54:47,7:47:1867:7:280:-9.31564,0,-151.98 0/0:62:58,4:58:2321:4:163:0,-3.60543,-193.983 0/0:36:36,0:36:1445:0:0:0,-10.8371,-130.296 0/0:68:68,0:68:2738:0:0:0,-20.47,-246.528 dDocent_Contig_5791 7 . A G 76.3153 . AB=0.166667;ABP=55.1256;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=317;DPB=317;DPRA=1.02662;EPP=22.5536;EPPR=671.824;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.967532;PAO=0;PQA=0;PQR=0;PRO=0;QA=279;QR=11718;RO=308;RPL=0;RPP=22.5536;RPPR=671.824;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=308;SRP=671.824;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:51:51,0:51:1941:0:0:0,-15.3525,-174.933 0/0:51:51,0:51:1929:0:0:0,-15.3525,-173.856 0/0:46:46,0:46:1752:0:0:0,-13.8474,-157.937 0/1:54:45,9:45:1730:9:279:-9.15441,0,-139.703 0/0:58:58,0:58:2191:0:0:0,-17.4597,-197.417 0/0:57:57,0:57:2175:0:0:0,-17.1587,-195.977 dDocent_Contig_5793 186 . A T 215.279 . AB=0.444444;ABP=3.49285;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=115;DPB=115;DPRA=1.875;EPP=24.725;EPPR=231.015;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.2571;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=391;QR=4192;RO=105;RPL=10;RPP=24.725;RPPR=231.015;RPR=0;RUN=1;SAF=0;SAP=24.725;SAR=10;SRF=0;SRP=231.015;SRR=105;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:18:10,8:10:404:8:309:-22.7497,0,-31.301 0/0:19:19,0:19:752:0:0:0,-5.71957,-67.9993 0/0:33:32,1:32:1278:1:41:0,-5.83942,-111.162 0/0:24:23,1:23:909:1:41:0,-3.13015,-76.5689 0/0:12:12,0:12:481:0:0:0,-3.61236,-42.931 0/0:9:9,0:9:368:0:0:0,-2.70927,-33.4854 dDocent_Contig_5794 18 . G A 385.058 . AB=0.141509;ABP=239.66;AC=4;AF=0.333333;AN=12;AO=32;CIGAR=1X;DP=308;DPB=308;DPRA=1.34;EPP=72.4974;EPPR=602.337;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.98913;PAO=0;PQA=0;PQR=0;PRO=0;QA=1270;QR=10860;RO=276;RPL=0;RPP=72.4974;RPPR=602.337;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=276;SRP=602.337;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:59:51,8:51:2034:8:313:-10.7715,0,-165.493 0/1:53:45,8:45:1774:8:312:-12.4857,0,-143.929 0/0:56:54,2:54:2086:2:81:0,-9.17195,-180.244 0/1:54:44,10:44:1724:10:404:-20.4642,0,-139.126 0/0:40:40,0:40:1559:0:0:0,-12.0412,-140.543 0/1:46:42,4:42:1683:4:160:-0.936047,0,-137.849 dDocent_Contig_5796 98 . N T 495.391 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=17;CIGAR=1X;DP=17;DPB=17;DPRA=0;EPP=39.9253;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=526;QR=0;RO=0;RPL=17;RPP=39.9253;RPPR=0;RPR=0;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:94:-8.77091,-0.90309,0 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:6:0,6:0:0:6:209:-19.1511,-1.80618,0 1/1:4:0,4:0:0:4:102:-9.43297,-1.20412,0 1/1:3:0,3:0:0:3:92:-8.58471,-0.90309,0 dDocent_Contig_5797 98 . N T 2237.63 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=72;CIGAR=3X;DP=72;DPB=76;DPRA=0;EPP=159.356;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=2;PQA=69;PQR=0;PRO=0;QA=2480;QR=0;RO=0;RPL=72;RPP=159.356;RPPR=0;RPR=0;RUN=1;SAF=72;SAP=159.356;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:39:0,39:0:0:39:1355:-122.252,-11.7402,0 .:.:.:.:.:.:.:. 1|1:33:0,33:0:0:33:1125:-101.21,-9.93399,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_5798 32 . G A 3120.09 . AB=0.213213;ABP=478.791;AC=4;AF=0.333333;AN=12;AO=173;CIGAR=1X1M1X;DP=1075;DPB=1075;DPRA=0;EPP=378.675;EPPR=1829.22;GTI=0;LEN=1;MEANALT=3.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.942197;PAIREDR=0.920333;PAO=0;PQA=0;PQR=0;PRO=0;QA=6853;QR=32698;RO=841;RPL=0;RPP=378.675;RPPR=1829.22;RPR=173;RUN=1;SAF=173;SAP=378.675;SAR=0;SRF=841;SRP=1829.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:101:68,29,0:68:2684:29,0:1140,0:-73.3397,0,-212.163,-93.8098,-220.893,-314.658 0|1:206:169,31,0:169:6591:31,0:1239,0:-51.1863,0,-532.397,-102.06,-541.729,-643.785 0|1:168:121,40,0:121:4683:40,0:1596,0:-95.0183,0,-372.576,-131.443,-384.617,-516.059 0|0:239:217,20,0:217:8402:20,0:780,0:0,-1.2257,-685.305,-65.3235,-691.325,-755.437 0|1:191:123,42,17:123:4809:42,17:1661,569:-99.6864,0,-382.735,-90.6627,-349.319,-480.892 0|0:170:143,11,3:143:5529:11,3:437,114:0,-7.06957,-457.824,-33.6998,-451.786,-486.86 dDocent_Contig_5799 19 . G A 385.416 . AB=0.137931;ABP=234.16;AC=1;AF=0.0833333;AN=12;AO=121;CIGAR=1X;DP=1821;DPB=1821;DPRA=0;EPP=265.758;EPPR=3692.34;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.942149;PAIREDR=0.972337;PAO=0;PQA=0;PQR=0;PRO=0;QA=4775;QR=67961;RO=1699;RPL=0;RPP=265.758;RPPR=3692.34;RPR=121;RUN=1;SAF=121;SAP=265.758;SAR=0;SRF=1699;SRP=3692.34;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:203:195,8:195:7759:8:318:0,-32.1225,-668.918 0/0:315:294,20:294:11783:20:777:0,-24.4008,-989.375 0/1:203:175,28:175:6957:28:1121:-40.0644,0,-564.695 0/0:358:336,22:336:13466:22:835:0,-32.3248,-1135.48 0/0:323:303,20:303:12082:20:799:0,-25.0058,-1014.28 0/0:419:396,23:396:15914:23:925:0,-42.5777,-1347.41 dDocent_Contig_5800 11 . C G 493.793 . AB=0.214286;ABP=82.4241;AC=3;AF=0.25;AN=12;AO=26;CIGAR=1X;DP=170;DPB=170;DPRA=2.15625;EPP=59.4686;EPPR=315.702;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.653846;PAIREDR=0.75;PAO=0;PQA=0;PQR=0;PRO=0;QA=1051;QR=5735;RO=144;RPL=0;RPP=59.4686;RPPR=315.702;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=144;SRP=315.702;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:17,5:17:681:5:202:-11.9394,0,-54.9976 0/1:36:26,10:26:1023:10:399:-25.4314,0,-81.5317 0/0:26:24,2:24:956:2:82:0,-0.0471021,-78.5567 0/1:54:45,9:45:1807:9:368:-17.2297,0,-146.585 0/0:14:14,0:14:546:0:0:0,-4.21442,-49.4761 0/0:18:18,0:18:722:0:0:0,-5.41854,-65.3072 dDocent_Contig_5801 13 . C A 131.026 . AB=0.100694;ABP=401.868;AC=2;AF=0.166667;AN=12;AO=67;CIGAR=1X;DP=1336;DPB=1336;DPRA=1.19167;EPP=148.499;EPPR=2743.42;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=59.9573;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.976303;PAO=0;PQA=0;PQR=0;PRO=0;QA=2648;QR=50622;RO=1266;RPL=0;RPP=148.499;RPPR=2752.09;RPR=67;RUN=1;SAF=67;SAP=148.499;SAR=0;SRF=1265;SRP=2743.42;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:195:174,21:174:6979:21:808:-14.3219,0,-569.071 0/0:299:286,13:286:11467:13:520:0,-42.8623,-984.081 0/0:219:213,5:213:8533:5:195:0,-48.1077,-749.534 0/0:338:318,20:318:12691:20:812:0,-28.3532,-1067.49 0/1:93:85,8:85:3384:8:313:-0.537671,0,-276.61 0/0:192:190,0:190:7568:0:0:0,-57.1957,-679.675 dDocent_Contig_5802 8 . C T 42461.8 . AB=0.392981;ABP=405.509;AC=6;AF=0.5;AN=12;AO=1590;CIGAR=1X;DP=4046;DPB=4046;DPRA=0;EPP=3455.65;EPPR=5329.63;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=60864;QR=94455;RO=2453;RPL=0;RPP=3455.65;RPPR=5329.63;RPR=1590;RUN=1;SAF=1590;SAP=3455.65;SAR=0;SRF=2453;SRP=5329.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:484:383,101:383:14723:101:3872:-202.881,0,-1178.66 0/1:593:439,153:439:16927:153:5845:-347.411,0,-1343.93 0/1:644:434,210:434:16711:210:8038:-529.347,0,-1309.26 0/1:778:490,287:490:18801:287:10993:-754.659,0,-1456.8 0/1:706:292,413:292:11269:413:15814:-1209.89,0,-801.155 0/1:841:415,426:415:16024:426:16302:-1213.21,0,-1188.17 dDocent_Contig_5803 23 . G T 41.6426 . AB=0.0954774;ABP=285.858;AC=1;AF=0.0833333;AN=12;AO=41;CIGAR=1X;DP=2252;DPB=2252;DPRA=0.624875;EPP=92.0407;EPPR=4804.14;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996382;PAO=0;PQA=0;PQR=0;PRO=0;QA=1546;QR=87338;RO=2211;RPL=0;RPP=92.0407;RPPR=4804.14;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=2211;SRP=4804.14;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:199:180,19:180:7144:19:722:-5.38608,0,-582.728 0/0:311:308,3:308:12177:3:115:0,-82.8958,-1084.37 0/0:361:350,11:350:13843:11:388:0,-73.4336,-1209.62 0/0:380:372,8:372:14596:8:321:0,-85.1331,-1283.35 0/0:512:512,0:512:20183:0:0:0,-154.127,-1814.87 0/0:489:489,0:489:19395:0:0:0,-147.204,-1743.99 dDocent_Contig_5804 19 . G A 5270.92 . AB=0.167604;ABP=1709.32;AC=2;AF=0.166667;AN=12;AO=299;CIGAR=1X;DP=4503;DPB=4503;DPRA=1.02838;EPP=652.281;EPPR=9131.88;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11885;QR=167577;RO=4204;RPL=0;RPP=652.281;RPPR=9131.88;RPR=299;RUN=1;SAF=299;SAP=652.281;SAR=0;SRF=4204;SRP=9131.88;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:572:572,0:572:22808:0:0:0,-172.189,-2050.74 0/0:740:740,0:740:29452:0:0:0,-222.762,-2648.03 0/0:505:504,1:504:20176:1:41:0,-147.926,-1810.02 0/0:908:908,0:908:36074:0:0:0,-273.335,-3243.33 0/1:828:661,167:661:26419:167:6625:-346.723,0,-2126.09 0/1:950:819,131:819:32648:131:5219:-183.591,0,-2649.35 dDocent_Contig_5805 12 . A G 2329.8 . AB=0.213052;ABP=375.624;AC=6;AF=0.5;AN=12;AO=111;CIGAR=1X;DP=521;DPB=521;DPRA=0;EPP=244.044;EPPR=893.314;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.540541;PAIREDR=0.946341;PAO=0;PQA=0;PQR=0;PRO=0;QA=4434;QR=16352;RO=410;RPL=0;RPP=244.044;RPPR=893.314;RPR=111;RUN=1;SAF=111;SAP=244.044;SAR=0;SRF=410;SRP=893.314;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:63:57,6:57:2254:6:230:-2.09997,0,-184.058 0/1:95:80,15:80:3195:15:596:-25.3769,0,-259.024 0/1:58:39,19:39:1555:19:766:-51.8015,0,-122.731 0/1:140:116,24:116:4613:24:950:-43.6578,0,-372.954 0/1:69:37,32:37:1478:32:1288:-95.415,0,-112.493 0/1:96:81,15:81:3257:15:604:-25.7971,0,-264.287 dDocent_Contig_5806 98 . N G 353.382 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=12;CIGAR=1X;DP=12;DPB=12;DPRA=0;EPP=29.068;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=363;QR=0;RO=0;RPL=12;RPP=29.068;RPPR=0;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:65:-6.17329,-0.60206,0 1/1:3:0,3:0:0:3:99:-9.23758,-0.90309,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:2:0,2:0:0:2:28:-2.65997,-0.60206,0 1/1:3:0,3:0:0:3:101:-9.42377,-0.90309,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_5807 39 . G A 39.1243 . AB=0.113636;ABP=60.0608;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=376;DPB=376;DPRA=0.662651;EPP=13.8677;EPPR=808.627;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997305;PAO=0;PQA=0;PQR=0;PRO=0;QA=200;QR=14800;RO=371;RPL=0;RPP=13.8677;RPPR=808.627;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=371;SRP=808.627;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:44:39,5:39:1533:5:200:-5.13422,0,-124.959 0/0:55:55,0:55:2220:0:0:0,-16.5566,-199.964 0/0:65:65,0:65:2590:0:0:0,-19.5669,-233.235 0/0:84:84,0:84:3340:0:0:0,-25.2865,-300.658 0/0:66:66,0:66:2633:0:0:0,-19.868,-237.096 0/0:62:62,0:62:2484:0:0:0,-18.6639,-223.701 dDocent_Contig_5808 108 . A T 72.6311 . AB=0.1875;ABP=30.1537;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=206;DPB=206;DPRA=0.873333;EPP=33.4109;EPPR=419.933;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.357143;PAIREDR=0.786458;PAO=0;PQA=0;PQR=0;PRO=0;QA=476;QR=6909;RO=192;RPL=0;RPP=33.4109;RPPR=419.933;RPR=14;RUN=1;SAF=0;SAP=33.4109;SAR=14;SRF=0;SRP=419.933;SRR=192;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:31,0:31:1114:0:0:0,-9.33193,-100.571 0/0:29:27,2:27:960:2:66:0,-2.46169,-80.4462 0/0:44:44,0:44:1588:0:0:0,-13.2453,-143.209 0/1:32:26,6:26:934:6:201:-8.78553,0,-74.7441 0/0:33:30,3:30:1087:3:104:0,-0.230966,-88.4386 0/0:37:34,3:34:1226:3:105:0,-1.34195,-100.85 dDocent_Contig_5809 12 . C G 21205.6 . AB=0.0437882;ABP=3553.5;AC=0;AF=0;AN=12;AO=86;CIGAR=1X3M1X;DP=2511;DPB=2511;DPRA=0;EPP=189.757;EPPR=3429.59;GTI=0;LEN=1;MEANALT=3.25;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3369;QR=62549;RO=1578;RPL=0;RPP=189.757;RPPR=3429.59;RPR=86;RUN=1;SAF=86;SAP=189.757;SAR=0;SRF=1578;SRP=3429.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:423:183,38,202:183:7208:38,202:1501,8012:-604.354,-535.928,-1117.45,0,-469.447,-532.153 0|0:578:345,35,175:345:13694:35,175:1366,6958:-468.986,-460.554,-1577.31,0,-1015.01,-1074.62 0|0:426:299,1,106:299:11884:1,106:40,4241:-259.339,-346.052,-1324.16,0,-975.112,-946.498 0|0:537:295,12,227:295:11645:12,227:462,8997:-651.711,-702.584,-1657.12,0,-920.254,-889.851 0|0:186:161,0,23:161:6387:0,23:0,911:-26.5035,-74.9693,-600.722,0,-525.749,-518.825 0|0:361:295,0,64:295:11731:0,64:0,2547:-120.89,-209.694,-1175.55,0,-965.845,-946.579 dDocent_Contig_5810 92 . C T 62.139 . AB=0.111765;ABP=225.573;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1X;DP=936;DPB=936;DPRA=1.10966;EPP=44.2683;EPPR=1992.08;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.9869;PAO=0;PQA=0;PQR=0;PRO=0;QA=651;QR=31282;RO=916;RPL=19;RPP=44.2683;RPPR=1992.08;RPR=0;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=916;SRP=1992.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:148:148,0:148:5083:0:0:0,-44.5524,-457.646 0/0:225:224,0:224:7670:0:0:0,-67.4307,-690.327 0/0:90:90,0:90:3007:0:0:0,-27.0927,-270.87 0/1:170:151,19:151:5146:19:651:-7.73678,0,-412.136 0/0:144:144,0:144:4945:0:0:0,-43.3483,-445.23 0/0:159:159,0:159:5431:0:0:0,-47.8638,-488.957 dDocent_Contig_5811 46 . A T 5734.58 . AB=0.27105;ABP=397.755;AC=4;AF=0.333333;AN=12;AO=238;CIGAR=1X;DP=1073;DPB=1073;DPRA=1.63419;EPP=405.371;EPPR=1171.8;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.92437;PAIREDR=0.86211;PAO=0;PQA=0;PQR=0;PRO=0;QA=9469;QR=33282;RO=834;RPL=18;RPP=375.299;RPPR=959.177;RPR=220;RUN=1;SAF=234;SAP=485.661;SAR=4;SRF=800;SRP=1530.74;SRR=34;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:143:107,36:107:4259:36:1420:-85.0092,0,-340.232 0/1:223:138,85:138:5439:85:3391:-238.105,0,-422.221 0/1:180:142,38:142:5722:38:1515:-82.4133,0,-460.584 0/1:321:244,76:244:9716:76:3020:-175.152,0,-777.116 0/0:117:117,0:117:4676:0:0:0,-35.2205,-420.758 0/0:89:86,3:86:3470:3:123:0,-15.3269,-300.862 dDocent_Contig_5812 19 . G T 297.268 . AB=0.0294118;ABP=133.81;AC=0;AF=0;AN=12;AO=7;CIGAR=1X1M1X;DP=307;DPB=307;DPRA=1.69298;EPP=18.2106;EPPR=576.279;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=280;QR=10364;RO=264;RPL=0;RPP=18.2106;RPPR=576.279;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=264;SRP=576.279;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:42:33,0,7,2,0:33:1301:0,7,2,0:0,277,82,0:-12.8497,-22.7836,-129.815,0,-107.02,-104.913,-16.0123,-123.046,-100.251,-122.444,-22.7836,-129.815,-107.02,-123.046,-129.815 0|0:68:52,2,2,4,8:52:2049:2,2,4,8:81,77,160,318:-10.527,-19.5003,-187.461,-19.8609,-181.742,-187.819,-12.9996,-174.883,-175.241,-180.358,0,-161.882,-162.241,-155.381,-166.153 0|0:38:35,0,3,0,0:35:1376:0,3,0,0:0,122,0,0:0,-10.536,-123.701,-0.066647,-113.636,-112.733,-10.536,-123.701,-113.636,-123.701,-10.536,-123.701,-113.636,-123.701,-123.701 0|0:34:26,0,6,2,0:26:1017:0,6,2,0:0,236,82,0:-11.5714,-19.3982,-103.009,0,-83.5982,-81.7921,-12.6259,-96.2397,-76.8287,-95.6377,-19.3982,-103.009,-83.5982,-96.2397,-103.009 0|0:59:54,4,1,0,0:54:2114:4,1,0,0:158,40,0,0:0,-3.25834,-175.858,-12.9595,-173.767,-186.467,-16.2556,-177.062,-186.768,-190.063,-16.2556,-177.062,-186.768,-190.063,-190.063 0|0:66:64,1,0,0,0:64:2507:1,0,0,0:41,0,0,0:0,-15.8171,-221.766,-19.2659,-222.067,-225.452,-19.2659,-222.067,-225.452,-225.452,-19.2659,-222.067,-225.452,-225.452,-225.452 dDocent_Contig_5813 20 . A T 583.077 . AB=0.125307;ABP=499.328;AC=1;AF=0.0833333;AN=12;AO=61;CIGAR=1X;DP=2114;DPB=2114;DPRA=1.27498;EPP=135.47;EPPR=4461.04;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992207;PAO=0;PQA=0;PQR=0;PRO=0;QA=2429;QR=81467;RO=2053;RPL=0;RPP=135.47;RPPR=4461.04;RPR=61;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=2053;SRP=4461.04;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:222:222,0:222:8757:0:0:0,-66.8287,-787.639 0/0:358:358,0:358:14252:0:0:0,-107.769,-1281.62 0/0:285:285,0:285:11239:0:0:0,-85.7935,-1010.78 0/0:426:426,0:426:16958:0:0:0,-128.239,-1524.85 0/0:416:406,10:406:16138:10:405:0,-88.4181,-1414.37 0/1:407:356,51:356:14123:51:2024:-59.8305,0,-1147.52 dDocent_Contig_5814 11 . T G 454.017 . AB=0.225806;ABP=63.7415;AC=1;AF=0.0833333;AN=12;AO=36;CIGAR=1X;DP=915;DPB=915;DPRA=1.78116;EPP=81.1833;EPPR=1911.73;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.98521;PAO=0;PQA=0;PQR=0;PRO=0;QA=1440;QR=35298;RO=879;RPL=0;RPP=81.1833;RPPR=1911.73;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=879;SRP=1911.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:180:180,0:180:7235:0:0:0,-54.1854,-650.782 0/0:286:285,1:285:11446:1:40:0,-82.0989,-1025.31 0/1:93:72,21:72:2880:21:829:-46.9246,0,-231.297 0/0:207:193,14:193:7787:14:571:0,-10.5813,-648.655 0/0:28:28,0:28:1135:0:0:0,-8.42884,-102.429 0/0:121:121,0:121:4815:0:0:0,-36.4246,-433.249 dDocent_Contig_5815 25 . T A 1009.2 . AB=0.197719;ABP=211.744;AC=4;AF=0.333333;AN=12;AO=52;CIGAR=1X;DP=405;DPB=405;DPRA=0.926056;EPP=115.927;EPPR=769.54;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.576923;PAIREDR=0.770538;PAO=0;PQA=0;PQR=0;PRO=0;QA=2066;QR=13598;RO=353;RPL=0;RPP=115.927;RPPR=769.54;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=353;SRP=769.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:53:41,12:41:1564:12:481:-27.6863,0,-125.068 0/1:89:72,17:72:2767:17:682:-34.9178,0,-222.398 0/1:44:37,7:37:1461:7:272:-11.5969,0,-118.505 0/1:77:61,16:61:2314:16:631:-33.9409,0,-185.285 0/0:57:57,0:57:2187:0:0:0,-17.1587,-197.043 0/0:85:85,0:85:3305:0:0:0,-25.5875,-297.548 dDocent_Contig_5816 49 . C A 6416.93 . AB=0.19975;ABP=1253.52;AC=5;AF=0.416667;AN=12;AO=349;CIGAR=1X;DP=1965;DPB=1965;DPRA=0;EPP=760.854;EPPR=3468.81;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997135;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13732;QR=64599;RO=1616;RPL=0;RPP=760.854;RPPR=3468.81;RPR=349;RUN=1;SAF=349;SAP=760.854;SAR=0;SRF=1616;SRP=3512.11;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:212:172,40:172:6880:40:1587:-79.2495,0,-555.039 0/0:368:338,30:338:13506:30:1166:0,-5.56189,-1109.29 0/1:282:206,76:206:8251:76:2988:-184.117,0,-657.203 0/1:309:261,48:261:10459:48:1886:-76.9315,0,-847.584 0/1:339:249,90:249:9903:90:3538:-216.407,0,-788.574 0/1:455:390,65:390:15600:65:2567:-94.21,0,-1265.79 dDocent_Contig_5817 9 . T C 176.347 . AB=0.125874;ABP=176.865;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X;DP=228;DPB=228;DPRA=4.68182;EPP=50.7827;EPPR=450.334;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=858;QR=7918;RO=206;RPL=0;RPP=50.7827;RPPR=450.334;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=206;SRP=450.334;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:345:0:0:0,-2.70927,-31.4082 0/0:27:25,2:25:965:2:78:0,-0.724337,-79.7609 0/0:13:13,0:13:495:0:0:0,-3.91339,-44.8947 0/0:36:34,2:34:1309:2:78:0,-3.43361,-110.693 0/1:68:60,8:60:2309:8:312:-7.97488,0,-187.554 0/1:75:65,10:65:2495:10:390:-12.8815,0,-202.174 dDocent_Contig_5818 13 . C A 2528.49 . AB=0.0613718;ABP=465.91;AC=0;AF=0;AN=12;AO=17;CIGAR=1X2M1X3M;DP=576;DPB=588;DPRA=0;EPP=39.9253;EPPR=932.4;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0.934579;PAO=0;PQA=0;PQR=0;PRO=0;QA=671;QR=16969;RO=428;RPL=0;RPP=39.9253;RPPR=932.4;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=428;SRP=932.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:86:65,4,0,17:65:2567:4,0,17:160,0,682:-36.6225,-43.0096,-253.02,-56.1895,-254.224,-267.405,0,-198.035,-211.215,-206.097 0|0:103:88,0,0,15:88:3504:0,0,15:0,0,600:-23.334,-49.8246,-338.347,-49.8246,-338.347,-338.347,0,-288.922,-288.922,-284.407 0|0:57:44,1,0,12:44:1715:1,0,12:37,0,484:-26.6803,-36.9011,-177.536,-39.9256,-177.837,-180.863,0,-137.939,-140.965,-137.353 0|0:134:99,12,0,23:99:3938:12,0,23:474,0,915:-45.5362,-36.3384,-356.959,-75.3382,-360.571,-399.572,0,-285.235,-324.235,-317.312 0|0:74:41,0,0,33:41:1636:0,0,33:0,0,1331:-97.7752,-110.117,-244.853,-110.117,-244.853,-244.853,0,-135.136,-135.136,-125.202 0|0:122:91,0,12,19:91:3609:0,12,19:0,474,748:-34.1231,-61.5169,-358.585,-22.5113,-319.58,-315.968,0,-297.068,-258.063,-291.348 dDocent_Contig_5819 9 . T A 2548.5 . AB=0.453271;ABP=7.06913;AC=6;AF=0.5;AN=12;AO=97;CIGAR=1X;DP=214;DPB=214;DPRA=0;EPP=213.643;EPPR=257.073;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.958763;PAIREDR=0.965812;PAO=0;PQA=0;PQR=0;PRO=0;QA=3650;QR=4487;RO=117;RPL=0;RPP=213.643;RPPR=257.073;RPR=97;RUN=1;SAF=97;SAP=213.643;SAR=0;SRF=117;SRP=257.073;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:15,11:15:574:11:400:-28.5112,0,-44.1741 0/1:40:32,8:32:1219:8:300:-15.3127,0,-97.9632 0/1:24:15,9:15:583:9:339:-23.6389,0,-45.5884 0/1:43:26,17:26:996:17:642:-45.1686,0,-77.0062 0/1:33:17,16:17:650:16:590:-43.4969,0,-48.9025 0/1:48:12,36:12:465:36:1379:-109.944,0,-27.7524 dDocent_Contig_5820 63 . G C 57244.8 . AB=0.673532;ABP=853.87;AC=6;AF=0.5;AN=12;AO=2191;CIGAR=1X;DP=3253;DPB=3253;DPRA=0;EPP=4760.71;EPPR=2300.43;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=74614;QR=35913;RO=1058;RPL=2191;RPP=4760.71;RPPR=2300.43;RPR=0;RUN=1;SAF=2191;SAP=4760.71;SAR=0;SRF=1058;SRP=2300.43;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:412:142,269:142:4805:269:9125:-697.229,0,-308.577 0/1:485:168,317:168:5686:317:10807:-826.622,0,-365.898 0/1:585:178,405:178:6031:405:13761:-1062.51,0,-367.068 0/1:640:242,398:242:8146:398:13515:-1023.59,0,-540.559 0/1:605:176,429:176:6046:429:14692:-1139.98,0,-362.163 0/1:526:152,373:152:5199:373:12714:-985.771,0,-309.674 dDocent_Contig_5821 78 . G C 3590.1 . AB=0.485294;ABP=3.52123;AC=6;AF=0.5;AN=12;AO=132;CIGAR=1X;DP=272;DPB=272;DPRA=0;EPP=289.645;EPPR=307.016;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.94697;PAIREDR=0.935714;PAO=0;PQA=0;PQR=0;PRO=0;QA=5002;QR=5270;RO=140;RPL=132;RPP=289.645;RPPR=307.016;RPR=0;RUN=1;SAF=132;SAP=289.645;SAR=0;SRF=140;SRP=307.016;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:12,10:12:433:10:372:-27.2084,0,-32.6873 0/1:63:34,29:34:1234:29:1055:-76.2971,0,-92.3974 0/1:60:17,43:17:651:43:1664:-131.959,0,-40.8643 0/1:74:47,27:47:1796:27:1037:-71.3625,0,-139.616 0/1:30:17,13:17:651:13:487:-35.1413,0,-49.8949 0/1:23:13,10:13:505:10:387:-28.2638,0,-38.8755 dDocent_Contig_5822 9 . T A 44334.4 . AB=0.729127;ABP=718.477;AC=7;AF=0.583333;AN=12;AO=1459;CIGAR=1X;DP=1910;DPB=1910;DPRA=0;EPP=3171.19;EPPR=982.344;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=55633;QR=17249;RO=451;RPL=0;RPP=3171.19;RPPR=982.344;RPR=1459;RUN=1;SAF=1459;SAP=3171.19;SAR=0;SRF=451;SRP=982.344;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:302:75,227:75:2842:227:8599:-682.781,0,-165.047 1/1:341:26,315:26:1000:315:11980:-987.425,-12.3395,0 0/1:369:110,259:110:4201:259:9897:-779.315,0,-267.091 0/1:232:79,153:79:3032:153:5861:-457.606,0,-203.205 0/1:309:117,192:117:4485:192:7312:-564.921,0,-310.687 0/1:357:44,313:44:1689:313:11984:-970.611,0,-44.8015 dDocent_Contig_5823 14 . T C 116.83 . AB=0.117647;ABP=132.532;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=476;DPB=476;DPRA=1.36364;EPP=29.068;EPPR=1010.57;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=0.866379;PAO=0;PQA=0;PQR=0;PRO=0;QA=484;QR=18573;RO=464;RPL=0;RPP=29.068;RPPR=1010.57;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=464;SRP=1010.57;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:62:62,0:62:2512:0:0:0,-18.6639,-226.207 0/0:90:90,0:90:3577:0:0:0,-27.0927,-321.956 0/0:69:69,0:69:2768:0:0:0,-20.7711,-249.225 0/0:86:86,0:86:3416:0:0:0,-25.8886,-307.479 0/0:67:67,0:67:2676:0:0:0,-20.169,-240.961 0/1:102:90,12:90:3624:12:484:-13.2059,0,-295.463 dDocent_Contig_5824 20 . A G 5635.39 . AB=0.0378748;ABP=3529.28;AC=0;AF=0;AN=12;AO=72;CIGAR=2M1X5M;DP=1901;DPB=1894.75;DPRA=0;EPP=159.356;EPPR=1688.07;GTI=0;LEN=1;MEANALT=22.5;MQM=29.9722;MQMR=46.107;NS=6;NUMALT=7;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2015;QR=30396;RO=776;RPL=0;RPP=159.356;RPPR=1688.07;RPR=72;RUN=1;SAF=72;SAP=159.356;SAR=0;SRF=776;SRP=1688.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:248:130,12,21,18,0,8,19,3:130:5102:12,21,18,0,8,19,3:392,819,696,0,196,603,117:-25.5682,-36.2454,-376.204,0,-315.12,-337.257,-17.072,-332.187,-295.948,-355.226,-64.7021,-379.817,-343.579,-360.645,-408.275,-51.4361,-366.547,-330.309,-347.375,-395.005,-392.597,-20.0763,-335.187,-298.949,-316.016,-363.646,-350.376,-357.926,-55.083,-370.198,-333.961,-351.027,-398.657,-385.387,-354.028,-397.754 0|0:345:145,16,21,10,5,5,49,18:145:5664:16,21,10,5,5,49,18:529,802,403,203,127,1830,708:-102.473,-107.664,-473.091,-82.1931,-413.981,-446.118,-117.424,-449.21,-423.742,-484.659,-129.569,-461.355,-435.887,-471.117,-498.309,-137.468,-469.252,-443.784,-479.014,-491.159,-506.206,0,-331.79,-306.322,-341.552,-353.697,-361.594,-355.499,-87.894,-419.682,-394.214,-429.444,-441.589,-449.486,-312.023,-452.723 0|0:278:123,7,0,15,6,22,39,12:123:4820:7,0,15,6,22,39,12:224,0,587,245,630,1326,479:-66.6324,-87.5024,-357.331,-103.659,-359.438,-375.596,-61.1113,-316.89,-333.048,-328.533,-83.6814,-339.461,-355.62,-313.071,-353.813,-58.9778,-314.749,-330.907,-288.359,-310.93,-324.285,0,-255.775,-271.933,-229.384,-251.955,-227.244,-260.193,-65.104,-320.884,-337.043,-294.494,-317.065,-292.353,-233.378,-333.43 0|0:376:159,15,9,11,5,8,52,31:159:6253:15,9,11,5,8,52,31:500,344,432,198,266,1865,1243:-89.0611,-100.366,-527.718,-109.573,-504.882,-538.734,-107.38,-502.688,-511.898,-535.937,-120.785,-516.094,-525.304,-523.11,-551.15,-116.213,-511.521,-520.731,-518.537,-531.943,-545.674,0,-395.306,-404.515,-402.321,-415.727,-411.154,-416.212,-34.7223,-430.035,-439.244,-437.05,-450.456,-445.883,-329.667,-457.264 0|0:315:81,17,39,8,62,17,44,9:81:3175:17,39,8,62,17,44,9:555,1545,314,2471,490,1605,346:-176.665,-160.822,-369.478,-78.1877,-251.737,-280.224,-178.566,-352.114,-269.482,-389.933,0,-173.551,-90.9162,-191.297,-195.115,-166.664,-340.209,-257.578,-357.955,-179.393,-375.319,-74.7052,-248.253,-165.619,-265.998,-87.4326,-254.094,-275.235,-172.711,-346.259,-263.627,-364.004,-185.442,-352.1,-260.143,-383.777 0|0:339:138,2,50,8,34,12,54,6:138:5382:2,50,8,34,12,54,6:71,1951,316,1341,306,1754,234:-114.362,-150.658,-549.734,0,-394.439,-384.634,-132.379,-526.812,-376.161,-529.65,-47.0839,-441.521,-290.869,-423.243,-436.532,-135.161,-529.59,-378.94,-511.312,-426.021,-531.224,-20.0571,-414.485,-263.835,-396.207,-310.916,-398.987,-403.476,-136.67,-531.102,-380.451,-512.824,-427.533,-515.602,-400.498,-534.542 dDocent_Contig_5826 23 . T C 9915.16 . AB=0.499246;ABP=3.01358;AC=6;AF=0.5;AN=12;AO=331;CIGAR=6M1X6M;DP=663;DPB=648.615;DPRA=0;EPP=721.768;EPPR=676.167;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.770393;PAIREDR=0.864516;PAO=0;PQA=0;PQR=0;PRO=0;QA=13296;QR=12201;RO=310;RPL=0;RPP=721.768;RPPR=676.167;RPR=331;RUN=1;SAF=331;SAP=721.768;SAR=0;SRF=310;SRP=676.167;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:98:45,2,50:45:1770:2,50:76,2000:-151.199,-158.513,-303.504,0,-139.37,-130.551 0|1:135:60,2,72:60:2360:2,72:66,2895:-220.548,-233.276,-426.798,0,-188.829,-172.489 0|1:100:56,4,39:56:2207:4,39:148,1590:-114.348,-119.102,-299.463,0,-169.484,-169.849 0|1:146:72,9,64:72:2840:9,64:344,2555:-188.757,-182.21,-413.166,0,-205.46,-214.416 0|1:67:28,0,39:28:1096:0,39:0,1581:-122.35,-130.779,-220.889,0,-90.5063,-78.7661 0|1:117:49,0,67:49:1928:0,67:0,2675:-205.537,-220.287,-378.882,0,-158.581,-138.412 dDocent_Contig_5827 19 . C T 61.5612 . AB=0.122449;ABP=63.6786;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=238;DPB=238;DPRA=0.920245;EPP=18.2106;EPPR=504.62;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.714286;PAIREDR=0.805195;PAO=0;PQA=0;PQR=0;PRO=0;QA=285;QR=9258;RO=231;RPL=0;RPP=18.2106;RPPR=504.62;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=231;SRP=504.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:25,1:25:989:1:40:0,-3.8311,-85.3061 0/1:49:43,6:43:1719:6:245:-7.679,0,-140.178 0/0:33:33,0:33:1342:0:0:0,-9.93399,-121.034 0/0:50:50,0:50:1993:0:0:0,-15.0515,-179.565 0/0:25:25,0:25:987:0:0:0,-7.52575,-89.1251 0/0:55:55,0:55:2228:0:0:0,-16.5566,-200.678 dDocent_Contig_5828 95 . C T 346.714 . AB=0.555556;ABP=3.73412;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=364;DPB=364;DPRA=0.400593;EPP=35.5824;EPPR=760.854;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=489;QR=11516;RO=349;RPL=15;RPP=35.5824;RPPR=760.854;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=349;SRP=760.854;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:39,0:39:1290:0:0:0,-11.7402,-116.394 0/0:93:93,0:93:3028:0:0:0,-27.9958,-272.76 0/0:72:72,0:72:2445:0:0:0,-21.6742,-220.312 0/0:113:113,0:113:3709:0:0:0,-34.0164,-334.028 0/1:27:12,15:12:400:15:489:-36.1943,0,-28.1923 0/0:20:20,0:20:644:0:0:0,-6.0206,-58.2655 dDocent_Contig_5829 61 . G A 92903.1 . AB=0.568351;ABP=227.126;AC=6;AF=0.5;AN=12;AO=3139;CIGAR=1X;DP=5523;DPB=5523;DPRA=0;EPP=6819.26;EPPR=5171.11;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=1;PAIREDR=0.998739;PAO=0;PQA=0;PQR=0;PRO=0;QA=121917;QR=91791;RO=2380;RPL=3139;RPP=6819.26;RPPR=5171.11;RPR=0;RUN=1;SAF=3139;SAP=6819.26;SAR=0;SRF=2380;SRP=5171.11;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:783:143,640:143:5433:640:24722:-1987.4,0,-253.153 0/1:1025:530,495:530:20495:495:19192:-1417.34,0,-1534.51 0/1:636:261,374:261:10101:374:14567:-1118.81,0,-717.286 0/1:1031:603,427:603:23242:427:16574:-1180.15,0,-1779.67 0/1:1030:360,670:360:13843:670:26058:-2033.12,0,-934.901 0/1:1018:483,533:483:18677:533:20804:-1564.71,0,-1373.52 dDocent_Contig_5830 87 . G A 1167.07 . AB=0.256522;ABP=121.441;AC=4;AF=0.333333;AN=12;AO=66;CIGAR=1X;DP=373;DPB=373;DPRA=0;EPP=5.11597;EPPR=13.7686;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.621212;PAIREDR=0.628664;PAO=0;PQA=0;PQR=0;PRO=0;QA=2365;QR=11285;RO=307;RPL=64;RPP=129.482;RPPR=643.849;RPR=2;RUN=1;SAF=35;SAP=3.53672;SAR=31;SRF=170;SRP=10.713;SRR=137;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:45:40,5:40:1486:5:192:-4.10116,0,-120.463 0/0:77:76,1:76:2801:1:41:0,-19.0847,-248.176 0/0:66:60,6:60:2203:6:205:0,-1.08562,-179.708 0/1:78:51,27:51:1837:27:974:-64.4808,0,-142.106 0/1:57:35,22:35:1310:22:780:-53.3408,0,-101.023 0/1:50:45,5:45:1648:5:173:-0.858714,0,-133.533 dDocent_Contig_5831 17 . T A 1394.35 . AB=0.147854;ABP=680.513;AC=3;AF=0.25;AN=12;AO=111;CIGAR=1X;DP=1411;DPB=1411;DPRA=0.988397;EPP=244.044;EPPR=2825.92;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994615;PAO=0;PQA=0;PQR=0;PRO=0;QA=4423;QR=51897;RO=1300;RPL=0;RPP=244.044;RPPR=2825.92;RPR=111;RUN=1;SAF=111;SAP=244.044;SAR=0;SRF=1300;SRP=2825.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:241:197,44:197:7872:44:1771:-87.0568,0,-635.508 0/1:275:240,35:240:9546:35:1373:-41.0532,0,-775.758 0/1:113:99,14:99:3991:14:558:-16.5471,0,-325.135 0/0:308:290,18:290:11614:18:721:0,-27.5024,-979.222 0/0:228:228,0:228:9111:0:0:0,-68.6348,-819.448 0/0:246:246,0:246:9763:0:0:0,-74.0534,-878.059 dDocent_Contig_5832 13 . C T 2700.74 . AB=0.188782;ABP=617.989;AC=2;AF=0.166667;AN=12;AO=168;CIGAR=1X;DP=1854;DPB=1854;DPRA=0;EPP=367.818;EPPR=3661.94;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6624;QR=66980;RO=1685;RPL=0;RPP=367.818;RPPR=3661.94;RPR=168;RUN=1;SAF=168;SAP=367.818;SAR=0;SRF=1685;SRP=3661.94;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:188:178,9:178:7015:9:354:0,-24.3603,-598.853 0/0:243:240,3:240:9599:3:106:0,-63.2662,-853.418 0/0:441:424,17:424:16816:17:644:0,-74.479,-1453.87 0/0:251:250,1:250:9885:1:41:0,-71.464,-884.941 0/1:310:240,70:240:9574:70:2771:-156.184,0,-767.738 0/1:421:353,68:353:14091:68:2708:-117.112,0,-1140.39 dDocent_Contig_5833 16 . T A 2656.89 . AB=0.133739;ABP=386.358;AC=1;AF=0.0833333;AN=12;AO=44;CIGAR=2M1X15M;DP=395;DPB=399.5;DPRA=0;EPP=98.5551;EPPR=428.619;GTI=0;LEN=1;MEANALT=4.5;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1742;QR=7695;RO=196;RPL=0;RPP=98.5551;RPPR=428.619;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=196;SRP=428.619;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:70:37,0,11,3,5,11:37:1428:0,11,3,5,11:0,411,121,201,424:-23.6756,-34.8137,-152.077,-1.17559,-118.435,-115.124,-24.8377,-142.102,-108.46,-141.199,-18.2464,-135.511,-101.869,-125.536,-134.006,0,-117.263,-83.6219,-107.288,-100.697,-113.952 0|0:125:55,0,37,18,0,11:55:2181:0,37,18,0,11:0,1405,669,0,436:-98.6268,-115.183,-294.722,0,-179.544,-168.405,-60.4511,-239.99,-124.814,-234.571,-115.183,-294.722,-179.544,-239.99,-294.722,-79.2947,-258.836,-143.657,-204.104,-258.836,-255.524 0|0:45:15,0,17,1,0,11:15:586:0,17,1,0,11:0,660,41,0,444:-49.7,-54.2155,-102.386,0,-48.165,-43.0475,-50.8309,-99.0016,-44.7804,-98.7006,-54.2155,-102.386,-48.165,-99.0016,-102.386,-17.6092,-65.7815,-11.5593,-62.3968,-65.7815,-62.4702 0|0:89:41,0,28,8,0,11:41:1614:0,28,8,0,11:0,1030,287,0,438:-71.8397,-84.182,-216.964,0,-132.78,-124.351,-60.789,-193.57,-109.389,-191.162,-84.182,-216.964,-132.78,-193.57,-216.964,-48.11,-180.897,-96.7135,-157.503,-180.897,-177.585 0|0:36:26,8,0,0,1,0:26:1027:8,0,0,1,0:311,0,0,41,0:-17.7175,0,-82.0923,-25.5443,-84.5006,-110.056,-25.5443,-84.5006,-110.056,-110.056,-22.1582,-81.116,-106.672,-106.672,-106.371,-25.5443,-84.5006,-110.056,-110.056,-106.672,-110.056 0|0:30:22,7,0,0,0,0:22:859:7,0,0,0,0:268,0,0,0,0:-15.3462,0,-68.4864,-21.9688,-70.5936,-92.5841,-21.9688,-70.5936,-92.5841,-92.5841,-21.9688,-70.5936,-92.5841,-92.5841,-92.5841,-21.9688,-70.5936,-92.5841,-92.5841,-92.5841,-92.5841 dDocent_Contig_5834 14 . C A 235.942 . AB=0.0993228;ABP=620.753;AC=2;AF=0.166667;AN=12;AO=63;CIGAR=1X;DP=2527;DPB=2527;DPRA=0.310455;EPP=139.813;EPPR=5351.35;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2541;QR=98589;RO=2463;RPL=0;RPP=139.813;RPPR=5351.35;RPR=63;RUN=1;SAF=63;SAP=139.813;SAR=0;SRF=2463;SRP=5351.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:200:178,22:178:7117:22:882:-19.4796,0,-579.968 0/0:300:288,12:288:11528:12:480:0,-46.758,-993.159 0/0:225:218,7:218:8799:7:287:0,-41.5265,-765.147 0/1:243:220,22:220:8790:22:892:-7.33646,0,-717.32 0/0:663:663,0:663:26536:0:0:0,-199.583,-2385.85 0/0:896:896,0:896:35819:0:0:0,-269.723,-3220.32 dDocent_Contig_5835 14 . T G 53.7271 . AB=0.117647;ABP=67.7713;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=237;DPB=237;DPRA=1.53731;EPP=24.725;EPPR=495.935;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.907489;PAO=0;PQA=0;PQR=0;PRO=0;QA=405;QR=9154;RO=227;RPL=0;RPP=24.725;RPPR=495.935;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=227;SRP=495.935;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:857:0:0:0,-6.32163,-77.4387 0/0:52:48,4:48:1936:4:162:0,-0.686604,-159.465 0/1:51:45,6:45:1826:6:243:-6.89544,0,-149.19 0/0:53:53,0:53:2119:0:0:0,-15.9546,-190.882 0/0:18:18,0:18:725:0:0:0,-5.41854,-65.5757 0/0:42:42,0:42:1691:0:0:0,-12.6433,-152.409 dDocent_Contig_5836 38 . T A 31563.6 . AB=0.734525;ABP=697.648;AC=6;AF=0.5;AN=12;AO=1068;CIGAR=1X;DP=1454;DPB=1454;DPRA=0;EPP=2322.14;EPPR=841.199;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.996255;PAIREDR=0.987047;PAO=0;PQA=0;PQR=0;PRO=0;QA=40064;QR=15390;RO=386;RPL=0;RPP=2322.14;RPPR=841.199;RPR=1068;RUN=1;SAF=1068;SAP=2322.14;SAR=0;SRF=386;SRP=841.199;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:165:87,78:87:3456:78:2954:-216.344,0,-261.405 0/1:161:32,129:32:1300:129:4833:-386.551,0,-68.7942 0/1:78:31,47:31:1221:47:1742:-133.556,0,-86.6778 0/1:236:104,132:104:4120:132:5029:-381.584,0,-299.736 0/1:438:49,389:49:1947:389:14501:-1172.65,0,-43.573 0/1:376:83,293:83:3346:293:11005:-876.893,0,-187.991 dDocent_Contig_5837 98 . N G 1201.64 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=39;CIGAR=2X;DP=39;DPB=43;DPRA=0;EPP=87.6977;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=3;PQA=51;PQR=0;PRO=0;QA=1328;QR=0;RO=0;RPL=39;RPP=87.6977;RPPR=0;RPR=0;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:1:0,1:0:0:1:35:-3.19375,-0.30103,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:38:0,38:0:0:38:1293:-116.668,-11.4391,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_5838 8 . C A 369.255 . AB=0.121469;ABP=443.586;AC=3;AF=0.25;AN=12;AO=50;CIGAR=1X;DP=732;DPB=732;DPRA=0.935294;EPP=111.584;EPPR=1481.78;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1900;QR=26269;RO=681;RPL=0;RPP=111.584;RPPR=1481.78;RPR=50;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=681;SRP=1481.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:103:90,13:90:3473:13:504:-14.7029,0,-281.687 0/0:123:115,7:115:4462:7:269:0,-12.5399,-377.049 0/1:155:141,14:141:5420:14:527:-1.11119,0,-441.121 0/1:96:80,16:80:3060:16:600:-25.4353,0,-246.657 0/0:126:126,0:126:4866:0:0:0,-37.9298,-437.961 0/0:129:129,0:129:4988:0:0:0,-38.8329,-448.928 dDocent_Contig_5839 41 . T C 8556.48 . AB=0.179227;ABP=2291.87;AC=4;AF=0.333333;AN=12;AO=513;CIGAR=2X;DP=3662;DPB=3662;DPRA=0;EPP=1116.98;EPPR=6710.69;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997086;PAO=0;PQA=0;PQR=0;PRO=0;QA=20138;QR=116923;RO=3089;RPL=0;RPP=1116.98;RPPR=6710.69;RPR=513;RUN=1;SAF=513;SAP=1116.98;SAR=0;SRF=3089;SRP=6710.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:514:440,72:440:16730:72:2806:-98.1525,0,-1350.34 0|1:376:307,69:307:11655:69:2745:-133.988,0,-935.305 0|0:408:369,24:369:14104:24:944:0,-33.4323,-1183.42 0|0:693:658,30:658:24763:30:1160:0,-102.677,-2122.63 0|1:786:623,161:623:23554:161:6340:-333.998,0,-1882.18 0|1:885:692,157:692:26117:157:6143:-296.731,0,-2093.11 dDocent_Contig_5840 7 . A T 6469.97 . AB=0.0896607;ABP=1813.6;AC=3;AF=0.25;AN=12;AO=111;CIGAR=2X1M1X;DP=4940;DPB=4940;DPRA=0.56789;EPP=244.044;EPPR=8749.7;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.999503;PAO=0;PQA=0;PQR=0;PRO=0;QA=4163;QR=154319;RO=4028;RPL=0;RPP=244.044;RPPR=8749.7;RPR=111;RUN=1;SAF=111;SAP=244.044;SAR=0;SRF=4028;SRP=8749.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:594:495,39,0,58:495:18917:39,0,58:1506,0,2332:-43.1677,-68.5109,-1608.93,-192.178,-1620.67,-1744.34,0,-1428.5,-1552.17,-1534.71 0|0:978:784,90,0,99:784:29977:90,0,99:3472,0,3955:-89.7342,-41.8259,-2474.5,-325.742,-2501.59,-2785.51,0,-2175.85,-2459.78,-2429.97 0|0:1090:967,88,0,31:967:37136:88,0,31:3371,0,1244:0,-17.4606,-3039.38,-291.096,-3065.88,-3339.52,-188.595,-2963.38,-3237.03,-3227.69 0|1:1040:894,121,0,23:894:34252:121,0,23:4644,0,932:-111.98,0,-2774.64,-381.101,-2811.06,-3192.18,-304.244,-2734.21,-3115.33,-3108.4 0|1:573:423,91,52,6:423:16212:91,52,6:3501,1959,242:-160.105,0,-1303.19,-126.912,-1170.05,-1441.83,-267.492,-1310.63,-1437.54,-1596.26 0|1:665:465,126,59,12:465:17825:126,59,12:4826,2204,466:-251.232,0,-1425.06,-210.749,-1282.53,-1655.97,-352.933,-1424.71,-1635.46,-1812.31 dDocent_Contig_5841 10 . A C 222.213 . AB=0.108108;ABP=348.509;AC=1;AF=0.0833333;AN=12;AO=36;CIGAR=1X;DP=1157;DPB=1157;DPRA=1.95556;EPP=81.1833;EPPR=2437.23;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999108;PAO=0;PQA=0;PQR=0;PRO=0;QA=1445;QR=44847;RO=1121;RPL=0;RPP=81.1833;RPPR=2437.23;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=1121;SRP=2437.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:149:149,0:149:5954:0:0:0,-44.8535,-535.626 0/0:155:155,0:155:6199:0:0:0,-46.6596,-557.657 0/0:103:103,0:103:4141:0:0:0,-31.0061,-372.651 0/0:178:178,0:178:7049:0:0:0,-53.5833,-634.077 0/1:259:231,28:231:9299:28:1127:-23.7442,0,-758.351 0/0:313:305,8:305:12205:8:318:0,-65.2358,-1068.57 dDocent_Contig_5842 9 . T C 844.921 . AB=0.126623;ABP=748.925;AC=1;AF=0.0833333;AN=12;AO=203;CIGAR=1X;DP=4641;DPB=4641;DPRA=0.943995;EPP=443.819;EPPR=9631.32;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.999549;PAO=0;PQA=0;PQR=0;PRO=0;QA=7753;QR=169560;RO=4434;RPL=0;RPP=443.819;RPPR=9631.32;RPR=203;RUN=1;SAF=203;SAP=443.819;SAR=0;SRF=4434;SRP=9631.32;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:616:538,78:538:20474:78:3011:-85.714,0,-1656.13 0/0:772:720,51:720:27593:51:1961:0,-55.4812,-2305.01 0/0:751:704,47:704:26897:47:1740:0,-69.2306,-2262.33 0/0:895:867,27:867:33127:27:1041:0,-175.465,-2885.42 0/0:713:713,0:713:27181:0:0:0,-214.634,-2444.71 0/0:894:892,0:892:34288:0:0:0,-268.519,-3083.37 dDocent_Contig_5843 11 . T C 36317.7 . AB=0.354719;ABP=694.529;AC=6;AF=0.5;AN=12;AO=1338;CIGAR=1X;DP=3772;DPB=3772;DPRA=0;EPP=2908.44;EPPR=5286.2;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999178;PAO=0;PQA=0;PQR=0;PRO=0;QA=53129;QR=97289;RO=2433;RPL=0;RPP=2908.44;RPPR=5286.2;RPR=1338;RUN=1;SAF=1338;SAP=2908.44;SAR=0;SRF=2433;SRP=5286.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:498:312,186:312:12403:186:7377:-513.657,0,-965.497 0/1:570:401,169:401:16093:169:6703:-431.402,0,-1275.49 0/1:635:379,256:379:15222:256:10188:-725.126,0,-1177.61 0/1:724:463,260:463:18475:260:10358:-713.495,0,-1443.18 0/1:645:417,228:417:16709:228:9039:-618.843,0,-1308.28 0/1:700:461,239:461:18387:239:9464:-640.47,0,-1442.62 dDocent_Contig_5844 98 . N C 1636.53 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=54;CIGAR=1X;DP=54;DPB=54;DPRA=0;EPP=120.27;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=54.7407;MQMR=0;NS=5;NUMALT=1;ODDS=3.38813e-21;PAIRED=0.574074;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1797;QR=0;RO=0;RPL=54;RPP=120.27;RPPR=0;RPR=0;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:10:0,10:0:0:10:309:-27.9609,-3.0103,0 1/1:8:0,8:0:0:8:248:-22.5241,-2.40824,0 1/1:4:0,4:0:0:4:129:-11.8862,-1.20412,0 1/1:6:0,6:0:0:6:203:-18.5471,-1.80618,0 1/1:26:0,26:0:0:26:908:-82.0357,-7.82678,0 ./.:.:.:.:.:.:.:. dDocent_Contig_5845 7 . A T 543.92 . AB=0.128146;ABP=527.866;AC=3;AF=0.25;AN=12;AO=92;CIGAR=1X;DP=1107;DPB=1107;DPRA=0;EPP=132.26;EPPR=2086.69;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=59.9057;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.515392;PAO=0;PQA=0;PQR=0;PRO=0;QA=3447;QR=38153;RO=1007;RPL=0;RPP=202.786;RPPR=2189.68;RPR=92;RUN=1;SAF=83;SAP=132.26;SAR=9;SRF=995;SRP=2086.69;SRR=12;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:120:104,13:104:3909:13:484:-8.38283,0,-316.256 0/1:173:147,26:147:5514:26:974:-35.89,0,-442.738 0/1:144:125,17:125:4774:17:646:-15.341,0,-386.563 0/0:164:156,6:156:5956:6:218:0,-29.1783,-516.019 0/0:256:239,16:239:9097:16:597:0,-23.0855,-764.406 0/0:250:236,14:236:8903:14:528:0,-27.396,-753.174 dDocent_Contig_5846 71 . A T 74080.9 . AB=0.689938;ABP=1223.85;AC=6;AF=0.5;AN=12;AO=2688;CIGAR=1X;DP=3896;DPB=3896;DPRA=0;EPP=5839.93;EPPR=2626.15;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999256;PAIREDR=0.999172;PAO=0;PQA=0;PQR=0;PRO=0;QA=95496;QR=43220;RO=1208;RPL=2688;RPP=5839.93;RPPR=2626.15;RPR=0;RUN=1;SAF=2688;SAP=5839.93;SAR=0;SRF=1208;SRP=2626.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:460:99,361:99:3398:361:12579:-993.463,0,-167.557 0/1:478:151,327:151:5331:327:11436:-885.211,0,-336.005 0/1:620:204,416:204:7612:416:15102:-1172.05,0,-498.308 0/1:728:301,427:301:10787:427:15243:-1152.2,0,-751.449 0/1:582:252,330:252:8906:330:11774:-884.283,0,-626.277 0/1:1028:201,827:201:7186:827:29362:-2332.1,0,-337.278 dDocent_Contig_5848 114 . A G 846.246 . AB=0.382353;ABP=15.2727;AC=4;AF=0.333333;AN=12;AO=45;CIGAR=1X;DP=196;DPB=196;DPRA=0;EPP=100.727;EPPR=330.903;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.8;PAIREDR=0.887417;PAO=0;PQA=0;PQR=0;PRO=0;QA=1551;QR=5083;RO=151;RPL=0;RPP=100.727;RPPR=330.903;RPR=45;RUN=1;SAF=0;SAP=100.727;SAR=45;SRF=0;SRP=330.903;SRR=151;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:18:8,10:8:276:10:350:-26.419,0,-19.7573 0/1:9:5,4:5:159:4:131:-9.40427,0,-11.9139 0/1:27:21,6:21:719:6:205:-10.6572,0,-56.8998 0/1:48:29,19:29:973:19:661:-45.3658,0,-73.426 0/0:33:30,3:30:990:3:99:0,-0.69687,-80.1619 0/0:61:58,3:58:1966:3:105:0,-8.56667,-167.415 dDocent_Contig_5849 8 . C A 4085.38 . AB=0.0320513;ABP=3860.27;AC=0;AF=0;AN=12;AO=65;CIGAR=1X3M1X3M1X;DP=2028;DPB=2050.56;DPRA=0;EPP=144.156;EPPR=3351.43;GTI=0;LEN=1;MEANALT=6;MQM=29.0923;MQMR=43.1261;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.967012;PAO=0;PQA=0;PQR=562.5;PRO=14.5;QA=2547;QR=60071;RO=1546;RPL=0;RPP=144.156;RPPR=3360.11;RPR=65;RUN=1;SAF=65;SAP=144.156;SAR=0;SRF=1545;SRP=3351.43;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:247:191,13,35:191:7401:13,35:499,1333:-44.9821,-74.0904,-597.087,0,-498.57,-516.434 0|0:309:226,5,58:226:8785:5,58:196,2232:-105.463,-162.054,-798.801,0,-626.902,-620.886 0|0:243:202,7,23:202:7907:7,23:275,857:-4.74788,-50.8219,-580.895,0,-517.494,-525.311 0|0:328:257,4,29:257:10006:4,29:159,1082:-7.78168,-76.7145,-774.264,0,-690.349,-690.053 0|0:415:301,21,71:301:11656:21,71:827,2709:-127.481,-173.075,-900.869,0,-689.124,-712.783 0|0:486:369,15,87:369:14316:15,87:591,3078:-129.304,-204.569,-1113.03,0,-877.167,-886.798 dDocent_Contig_5851 9 . C T 48973.9 . AB=0.178271;ABP=3528.28;AC=0;AF=0;AN=12;AO=699;CIGAR=1X1M1X2M;DP=3921;DPB=3921.2;DPRA=0;EPP=1520.87;EPPR=2365.58;GTI=0;LEN=1;MEANALT=5.83333;MQM=27.5408;MQMR=59.6758;NS=6;NUMALT=3;ODDS=0;PAIRED=0.97568;PAIREDR=0.983516;PAO=0;PQA=0;PQR=0;PRO=0;QA=18570;QR=42505;RO=1092;RPL=0;RPP=1520.87;RPPR=2374.26;RPR=699;RUN=1;SAF=699;SAP=1520.87;SAR=0;SRF=1091;SRP=2365.58;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:436:117,65,26,227:117:4563:65,26,227:1657,1036,7648:-547.038,-467.821,-820.177,-497.096,-754.586,-861.198,0,-257.557,-286.802,-303.631 0|0:549:148,103,12,276:148:5783:103,12,276:2466,457,9206:-647.35,-528.306,-972.615,-654.874,-966.595,-1126.58,0,-311.817,-438.347,-392.29 0|0:461:131,116,12,189:131:5070:116,12,189:2994,471,6673:-476.438,-307.554,-688.356,-477.165,-684.57,-889.282,0,-207.474,-377.06,-358.873 0|0:718:255,148,15,291:255:9895:148,15,291:3697,597,9763:-663.699,-491.168,-1257.72,-691.343,-1253.16,-1497.94,0,-561.893,-762.044,-723.562 0|0:849:224,90,0,533:224:8751:90,0,533:2654,0,18723:-1382.87,-1262.39,-1954.24,-1450.3,-1981.34,-2169.24,0,-531.136,-719.014,-558.565 0|0:908:217,177,16,495:217:8443:177,16,495:5102,629,16666:-1191.22,-896.63,-1536.78,-1204.89,-1538.41,-1893.51,0,-333.604,-641.823,-544.468 dDocent_Contig_5852 9 . T C 9184.36 . AB=0.317961;ABP=358.773;AC=6;AF=0.5;AN=12;AO=393;CIGAR=1X;DP=1236;DPB=1236;DPRA=0;EPP=856.399;EPPR=1774.93;GTI=0;LEN=1;MEANALT=2.16667;MQM=46.0891;MQMR=58.7157;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998775;PAO=0;PQA=0;PQR=0;PRO=0;QA=15064;QR=31150;RO=816;RPL=0;RPP=856.399;RPPR=1774.93;RPR=393;RUN=1;SAF=393;SAP=856.399;SAR=0;SRF=816;SRP=1774.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:187:107,78:107:4086:78:2962:-200.095,0,-311.262 0/1:213:163,50:163:6202:50:1939:-102.954,0,-490.396 0/1:220:156,57:156:5990:57:2173:-124.503,0,-464.672 0/1:275:185,87:185:7040:87:3350:-203.691,0,-540.142 0/1:136:89,41:89:3368:41:1571:-94.2313,0,-261.953 0/1:205:116,80:116:4464:80:3069:-204.184,0,-332.595 dDocent_Contig_5854 34 . G C 374.001 . AB=0.144186;ABP=239.438;AC=3;AF=0.25;AN=12;AO=35;CIGAR=1X;DP=537;DPB=537;DPRA=0.717949;EPP=79.0118;EPPR=1093.09;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1336;QR=19058;RO=502;RPL=0;RPP=79.0118;RPPR=1093.09;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=502;SRP=1093.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:60:52,8:52:1983:8:303:-9.56423,0,-160.643 0/0:79:76,3:76:2898:3:118:0,-12.7787,-249.986 0/1:44:36,8:36:1357:8:316:-15.5605,0,-109.165 0/1:111:96,15:96:3632:15:562:-17.4972,0,-293.583 0/0:117:117,0:117:4432:0:0:0,-35.2205,-398.945 0/0:126:125,1:125:4756:1:37:0,-34.2319,-424.377 dDocent_Contig_5855 189 . A G 1261.63 . AB=0.425926;ABP=8.15749;AC=4;AF=0.333333;AN=12;AO=46;CIGAR=1X;DP=150;DPB=150;DPRA=1.28571;EPP=102.898;EPPR=228.843;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1828;QR=4198;RO=104;RPL=46;RPP=102.898;RPPR=228.843;RPR=0;RUN=1;SAF=0;SAP=102.898;SAR=46;SRF=0;SRP=228.843;SRR=104;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:15:10,5:10:396:5:184:-12.401,0,-31.4812 0/1:33:16,17:16:645:17:674:-51.0477,0,-48.4492 0/1:20:12,8:12:485:8:318:-22.9642,0,-37.979 0/1:40:24,16:24:977:16:652:-46.9716,0,-76.1845 0/0:34:34,0:34:1367:0:0:0,-10.235,-123.28 0/0:8:8,0:8:328:0:0:0,-2.40824,-29.8903 dDocent_Contig_5856 9 . T C 5051.13 . AB=0.164511;ABP=1892.75;AC=5;AF=0.416667;AN=12;AO=351;CIGAR=1X;DP=2429;DPB=2429;DPRA=0;EPP=765.197;EPPR=4513.16;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999519;PAO=0;PQA=0;PQR=0;PRO=0;QA=13427;QR=79203;RO=2077;RPL=0;RPP=765.197;RPPR=4513.16;RPR=351;RUN=1;SAF=351;SAP=765.197;SAR=0;SRF=2077;SRP=4513.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:315:229,86:229:8726:86:3317:-203.843,0,-690.279 0/1:324:280,44:280:10619:44:1659:-52.0359,0,-857.806 0/1:381:331,50:331:12649:50:1921:-58.4412,0,-1023.18 0/1:420:344,76:344:13105:76:2938:-138.153,0,-1052.47 0/1:493:430,62:430:16377:62:2335:-61.861,0,-1324.63 0/0:496:463,33:463:17727:33:1257:0,-35.894,-1481.1 dDocent_Contig_5858 8 . C T 82.6522 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=2;CIGAR=1M2D3M4I1X7M;DP=98;DPB=98.7143;DPRA=1.4375;EPP=7.35324;EPPR=198.443;GTI=0;LEN=1;MEANALT=1;MQM=15;MQMR=40;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=30;QR=3507;RO=90;RPL=0;RPP=7.35324;RPPR=198.443;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=90;SRP=198.443;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:13:9,0,0,4:9:346:0,0,4:0,0,154:-9.46897,-12.1782,-38.6673,-12.1782,-38.6673,-38.6673,0,-26.8504,-26.8504,-25.6463 0|0:23:21,2,0,0:21:809:2,0,0:30,0,0:0,-4.6325,-66.2875,-6.32163,-66.8895,-68.4372,-6.32163,-66.8895,-68.4372,-68.4372 0|0:11:11,0,0,0:11:429:0,0,0:0,0,0:0,-3.31133,-36.4204,-3.31133,-36.4204,-36.4204,-3.31133,-36.4204,-36.4204,-36.4204 0|0:14:12,0,2,0:12:468:0,2,0:0,80,0:-1.40701,-5.01937,-40.8085,0,-36.0947,-35.4927,-5.01937,-40.8085,-36.0947,-40.8085 0|0:12:12,0,0,0:12:473:0,0,0:0,0,0:0,-3.61236,-39.9529,-3.61236,-39.9529,-39.9529,-3.61236,-39.9529,-39.9529,-39.9529 0|0:25:25,0,0,0:25:982:0,0,0:0,0,0:0,-7.52575,-82.7166,-7.52575,-82.7166,-82.7166,-7.52575,-82.7166,-82.7166,-82.7166 dDocent_Contig_5859 40 . A T 637.012 . AB=0.209581;ABP=125.354;AC=4;AF=0.333333;AN=12;AO=38;CIGAR=1X;DP=244;DPB=244;DPRA=0.961905;EPP=85.5263;EPPR=450.334;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.973684;PAIREDR=0.907767;PAO=0;PQA=0;PQR=0;PRO=0;QA=1432;QR=7698;RO=206;RPL=0;RPP=85.5263;RPPR=450.334;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=206;SRP=450.334;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:26,7:26:977:7:278:-15.4569,0,-78.3079 0/1:37:32,5:32:1187:5:197:-6.96825,0,-95.9887 0/0:35:32,3:32:1201:3:111:0,-0.182822,-98.0361 0/1:42:38,4:38:1417:4:149:-1.12987,0,-115.163 0/0:42:42,0:42:1593:0:0:0,-12.6433,-143.644 0/1:55:36,19:36:1323:19:697:-46.4877,0,-102.803 dDocent_Contig_5860 77 . C A 79.0909 . AB=0.142857;ABP=57.2971;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=1X;DP=154;DPB=154;DPRA=0.933333;EPP=18.2106;EPPR=322.217;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993197;PAO=0;PQA=0;PQR=0;PRO=0;QA=279;QR=5879;RO=147;RPL=7;RPP=18.2106;RPPR=322.217;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=147;SRP=322.217;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:20,4:20:803:4:157:-7.28317,0,-65.3627 0/1:25:22,3:22:887:3:122:-3.84674,0,-72.6125 0/0:28:28,0:28:1115:0:0:0,-8.42884,-100.635 0/0:41:41,0:41:1648:0:0:0,-12.3422,-148.547 0/0:18:18,0:18:708:0:0:0,-5.41854,-64.0433 0/0:18:18,0:18:718:0:0:0,-5.41854,-64.945 dDocent_Contig_5861 98 . N C 263.882 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=8;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=268;QR=0;RO=0;RPL=8;RPP=20.3821;RPPR=0;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:3:0,2:0:0:2:67:-6.20475,-0.60206,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 dDocent_Contig_5862 16 . A T 1103.55 . AB=0.141869;ABP=646.923;AC=1;AF=0.0833333;AN=12;AO=160;CIGAR=1X;DP=5925;DPB=5925;DPRA=0.740476;EPP=350.446;EPPR=12515;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995835;PAO=0;PQA=0;PQR=0;PRO=0;QA=6153;QR=220579;RO=5762;RPL=0;RPP=350.446;RPPR=12515;RPR=160;RUN=1;SAF=160;SAP=350.446;SAR=0;SRF=5762;SRP=12515;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:692:678,14:678:25916:14:535:0,-159.821,-2282.33 0/0:766:732,34:732:28010:34:1304:0,-112.948,-2401.49 0/1:578:496,82:496:19047:82:3175:-111.877,0,-1539.09 0/0:1076:1047,29:1047:40154:29:1100:0,-224.615,-3511.78 0/0:1260:1259,0:1259:48152:0:0:0,-378.997,-4329.93 0/0:1553:1550,1:1550:59300:1:39:0,-463.357,-5328.94 dDocent_Contig_5864 18 . A G 19290.3 . AB=0.573889;ABP=55.3166;AC=6;AF=0.5;AN=12;AO=633;CIGAR=1M1X;DP=1103;DPB=1103;DPRA=0;EPP=1377.55;EPPR=659.007;GTI=0;LEN=1;MEANALT=1.83333;MQM=59.2591;MQMR=59.9546;NS=6;NUMALT=1;ODDS=0;PAIRED=0.777251;PAIREDR=0.553288;PAO=0;PQA=0;PQR=0;PRO=0;QA=25203;QR=17503;RO=441;RPL=0;RPP=1377.55;RPPR=960.63;RPR=633;RUN=1;SAF=633;SAP=1377.55;SAR=0;SRF=403;SRP=659.007;SRR=38;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:146:56,86:56:2250:86:3461:-267.004,0,-159.525 0|1:261:89,159:89:3505:159:6263:-487.887,0,-240.446 0|1:146:34,112:34:1345:112:4500:-360.966,0,-77.3658 0|1:264:87,166:87:3462:166:6665:-521.985,0,-235.075 0|1:114:88,26:88:3506:26:1023:-58.0436,0,-281.268 0|1:172:87,84:87:3435:84:3291:-244.361,0,-257.23 dDocent_Contig_5865 14 . C A 1988.62 . AB=0.266667;ABP=159.067;AC=6;AF=0.5;AN=12;AO=88;CIGAR=1X;DP=330;DPB=330;DPRA=0;EPP=194.1;EPPR=528.507;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.931818;PAIREDR=0.909091;PAO=0;PQA=0;PQR=0;PRO=0;QA=3416;QR=9568;RO=242;RPL=0;RPP=194.1;RPPR=528.507;RPR=88;RUN=1;SAF=88;SAP=194.1;SAR=0;SRF=242;SRP=528.507;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:44:36,8:36:1378:8:300:-14.1054,0,-111.026 0/1:46:33,13:33:1330:13:505:-31.944,0,-106.111 0/1:64:53,11:53:2090:11:433:-20.0571,0,-169.011 0/1:51:30,21:30:1210:21:818:-58.5746,0,-93.8186 0/1:61:41,20:41:1616:20:794:-53.4115,0,-127.308 0/1:64:49,15:49:1944:15:566:-31.9914,0,-155.892 dDocent_Contig_5866 98 . N A 187.611 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=198;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:60:-5.69897,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:138:-12.7604,-1.20412,0 dDocent_Contig_5867 22 . G A 1184.84 . AB=0.12071;ABP=1058.89;AC=2;AF=0.166667;AN=12;AO=185;CIGAR=1X3M1X;DP=2985;DPB=3029.4;DPRA=0;EPP=404.733;EPPR=5865.99;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.962162;PAIREDR=0.999259;PAO=0;PQA=0;PQR=0;PRO=0;QA=7367;QR=106243;RO=2700;RPL=0;RPP=404.733;RPPR=5865.99;RPR=185;RUN=1;SAF=185;SAP=404.733;SAR=0;SRF=2700;SRP=5865.99;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:410:368,21:368:14470:21:837:0,-41.8507,-1225.72 0|1:470:405,57:405:16013:57:2264:-64.503,0,-1300.62 0|1:375:302,45:302:11932:45:1798:-57.2027,0,-968.307 0|0:623:568,49:568:22329:49:1954:0,-10.0775,-1831.86 0|0:533:518,11:518:20284:11:434:0,-120.134,-1784.73 0|0:574:539,2:539:21215:2:80:0,-155.663,-1900.23 dDocent_Contig_5868 18 . A T 3475.18 . AB=0.109091;ABP=514.017;AC=0;AF=0;AN=12;AO=46;CIGAR=9M1X6M;DP=3371;DPB=3363.75;DPRA=0.513793;EPP=102.898;EPPR=5868.16;GTI=0;LEN=1;MEANALT=9.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.997779;PAO=0;PQA=0;PQR=0;PRO=0;QA=1824;QR=104795;RO=2701;RPL=0;RPP=102.898;RPPR=5868.16;RPR=46;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=2701;SRP=5868.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:385:239,35,52,42:239:9270:35,52,42:1270,1973,1664:-89.8331,-58.0997,-809.155,0,-657.912,-745.941,-24.8231,-682.739,-624.643,-773.779 0|0:509:456,27,3,4:456:17687:27,3,4:1008,117,160:0,-54.7248,-1499.74,-127.65,-1498.25,-1579.87,-124.086,-1494.69,-1567.6,-1576.01 0|0:391:303,64,16,0:303:11820:64,16,0:2425,620,0:-107.617,0,-952.347,-147.889,-920.676,-1114.67,-198.829,-971.613,-1119.49,-1170.42 0|0:511:401,62,43,0:401:15617:62,43,0:2348,1628,0:-71.7826,0,-1264.86,-59.0363,-1150.06,-1329.61,-192.496,-1283.52,-1342.56,-1476.01 0|0:705:560,83,53,0:560:21732:83,53,0:3103,2031,0:-85.5074,0,-1760.58,-87.3902,-1618.88,-1857.01,-254.084,-1785.57,-1872.96,-2039.65 0|0:870:742,59,58,0:742:28669:59,58,0:2199,2178,0:0,-43.3537,-2380.2,-44.9408,-2219.54,-2382.09,-223.364,-2397.96,-2399.55,-2577.97 dDocent_Contig_5870 107 . N T 227.091 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=10;CIGAR=1X;DP=13;DPB=13;DPRA=0;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=233;QR=0;RO=0;RPL=0;RPP=24.725;RPPR=0;RPR=10;RUN=1;SAF=0;SAP=24.725;SAR=10;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:3:0,3:0:0:3:48:-4.47898,-0.90309,0 1/1:1:0,1:0:0:1:11:-1.09999,-0.30103,0 1/1:4:0,3:0:0:3:94:-8.6401,-0.90309,0 1/1:2:0,1:0:0:1:11:-1.01,-0.30103,0 1/1:2:0,1:0:0:1:35:-3.2887,-0.30103,0 dDocent_Contig_5871 13 . T A 29806.1 . AB=0.279516;ABP=1784.05;AC=6;AF=0.5;AN=12;AO=1179;CIGAR=1X;DP=4218;DPB=4218;DPRA=0;EPP=2563.18;EPPR=6450.11;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.992366;PAIREDR=0.997642;PAO=0;PQA=0;PQR=0;PRO=0;QA=47167;QR=118988;RO=2969;RPL=0;RPP=2563.18;RPPR=6450.11;RPR=1179;RUN=1;SAF=1179;SAP=2563.18;SAR=0;SRF=2969;SRP=6450.11;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:443:239,203:239:9603:203:8151:-599.671,0,-730.189 0/1:674:422,229:422:16898:229:9179:-629.167,0,-1323.07 0/1:525:320,195:320:12819:195:7820:-547.947,0,-997.314 0/1:946:609,315:609:24392:315:12539:-849.066,0,-1914.54 0/1:743:621,122:621:24895:122:4872:-214.697,0,-2014.64 0/1:887:758,115:758:30381:115:4606:-151.281,0,-2468.29 dDocent_Contig_5873 16 . C T 95.9918 . AB=0.0940767;ABP=413.767;AC=1;AF=0.0833333;AN=12;AO=56;CIGAR=1X;DP=2344;DPB=2344;DPRA=0.808036;EPP=124.613;EPPR=4971.34;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2245;QR=91969;RO=2288;RPL=0;RPP=124.613;RPPR=4971.34;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=2288;SRP=4971.34;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:287:260,27:260:10485:27:1077:-10.821,0,-856.535 0/0:313:291,22:291:11654:22:884:0,-14.3559,-968.159 0/0:460:457,3:457:18345:3:123:0,-127.009,-1638.01 0/0:388:384,4:384:15404:4:161:0,-101.924,-1370.26 0/0:328:328,0:328:13240:0:0:0,-98.7378,-1190.56 0/0:568:568,0:568:22841:0:0:0,-170.985,-2053.64 dDocent_Contig_5874 88 . G A 628.556 . AB=0.203046;ABP=153.9;AC=1;AF=0.0833333;AN=12;AO=40;CIGAR=1X;DP=703;DPB=703;DPRA=1.94664;EPP=89.8692;EPPR=1442.7;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.975;PAIREDR=0.998492;PAO=0;PQA=0;PQR=0;PRO=0;QA=1371;QR=23230;RO=663;RPL=40;RPP=89.8692;RPPR=1442.7;RPR=0;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=663;SRP=1442.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:84:84,0:84:2860:0:0:0,-25.2865,-257.642 0/0:73:73,0:73:2501:0:0:0,-21.9752,-225.351 0/0:39:39,0:39:1337:0:0:0,-11.7402,-120.613 0/0:158:158,0:158:5635:0:0:0,-47.5627,-507.253 0/0:152:152,0:152:5357:0:0:0,-45.7566,-482.251 0/1:197:157,40:157:5540:40:1371:-64.3785,0,-439.415 dDocent_Contig_5875 9 . G A 2206.04 . AB=0.124092;ABP=2198.79;AC=3;AF=0.25;AN=12;AO=285;CIGAR=1X;DP=3562;DPB=3562;DPRA=0;EPP=621.88;EPPR=7116.75;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999389;PAO=0;PQA=0;PQR=0;PRO=0;QA=10890;QR=125241;RO=3276;RPL=0;RPP=621.88;RPPR=7116.75;RPR=285;RUN=1;SAF=285;SAP=621.88;SAR=0;SRF=3276;SRP=7116.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:435:358,77:358:13648:77:2932:-133.106,0,-1096.77 0/1:665:604,60:604:23133:60:2294:-6.40347,0,-1880.39 0/0:517:475,42:475:18217:42:1586:0,-12.6237,-1495.58 0/1:689:604,85:604:23094:85:3262:-86.3162,0,-1869.76 0/0:575:561,14:561:21428:14:544:0,-123.786,-1878.05 0/0:681:674,7:674:25721:7:272:0,-180.154,-2288.55 dDocent_Contig_5876 45 . T A 28964.9 . AB=0.343947;ABP=673.962;AC=6;AF=0.5;AN=12;AO=1091;CIGAR=1X;DP=3172;DPB=3172;DPRA=0;EPP=2235.15;EPPR=4491.46;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=0.999083;PAIREDR=0.999036;PAO=0;PQA=0;PQR=0;PRO=0;QA=42932;QR=83123;RO=2075;RPL=16;RPP=2235.15;RPPR=4491.46;RPR=1075;RUN=1;SAF=1091;SAP=2372.09;SAR=0;SRF=2075;SRP=4508.82;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:372:250,122:250:10040:122:4827:-322.367,0,-790.951 0/1:418:263,155:263:10517:155:6125:-425.188,0,-819.997 0/1:338:204,132:204:8148:132:5167:-363.355,0,-631.316 0/1:586:297,289:297:11887:289:11435:-852.011,0,-892.56 0/1:677:531,144:531:21236:144:5643:-304.118,0,-1705.8 0/1:781:530,249:530:21295:249:9735:-640.672,0,-1679.76 dDocent_Contig_5877 98 . N A 393.832 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=12;CIGAR=1X;DP=12;DPB=12;DPRA=0;EPP=29.068;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=406;QR=0;RO=0;RPL=12;RPP=29.068;RPPR=0;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:6:0,6:0:0:6:196:-17.9615,-1.80618,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_5878 36 . C G 165.959 . AB=0.119403;ABP=87.3088;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=12M1X2M;DP=562;DPB=576.733;DPRA=0.962687;EPP=24.725;EPPR=1143.03;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.64381;PAO=0;PQA=0;PQR=0;PRO=0;QA=404;QR=20561;RO=525;RPL=0;RPP=24.725;RPPR=1143.03;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=525;SRP=1143.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:67:57,1,8:57:2232:1,8:40,322:-9.43375,-23.2962,-206.524,0,-180.285,-181.172 0|0:105:102,1,2:102:3988:1,2:32,82:0,-28.1565,-355.701,-23.8772,-349.233,-351.209 0|0:75:75,0,0:75:2936:0,0:0,0:0,-22.5772,-264.378,-22.5772,-264.378,-264.378 0|0:103:102,1,0:102:4006:1,0:29,0:0,-28.1064,-357.681,-30.7051,-357.982,-360.289 0|0:90:89,0,0:89:3489:0,0:0,0:0,-26.7917,-313.686,-26.7917,-313.686,-313.686 0|0:122:100,14,0:100:3910:14,0:500,0:-10.384,0,-317.235,-40.487,-321.45,-361.963 dDocent_Contig_5879 46 . C G 2432.21 . AB=0.277473;ABP=159.571;AC=4;AF=0.333333;AN=12;AO=101;CIGAR=1X;DP=676;DPB=676;DPRA=0.583333;EPP=222.329;EPPR=1249.44;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.841584;PAIREDR=0.820557;PAO=0;PQA=0;PQR=0;PRO=0;QA=3987;QR=22767;RO=574;RPL=0;RPP=222.329;RPPR=1249.44;RPR=101;RUN=1;SAF=101;SAP=222.329;SAR=0;SRF=574;SRP=1249.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:36,5:36:1426:5:200:-6.03731,0,-116.253 0/1:68:59,9:59:2339:9:345:-10.9344,0,-190.199 0/1:118:73,45:73:2882:45:1775:-124.452,0,-223.952 0/1:137:95,42:95:3768:42:1667:-109.019,0,-297.904 0/0:143:142,0:142:5623:0:0:0,-42.7463,-505.485 0/0:169:169,0:169:6729:0:0:0,-50.8741,-605.309 dDocent_Contig_5880 99 . N C 43.709 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=2X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=46;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:46:-4.3698,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_5881 15 . T A 205.403 . AB=0.0928571;ABP=1010.88;AC=1;AF=0.0833333;AN=12;AO=111;CIGAR=1X;DP=4558;DPB=4558;DPRA=0.660387;EPP=244.044;EPPR=9644.35;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998874;PAO=0;PQA=0;PQR=0;PRO=0;QA=4377;QR=177847;RO=4440;RPL=0;RPP=244.044;RPPR=9644.35;RPR=111;RUN=1;SAF=111;SAP=244.044;SAR=0;SRF=4440;SRP=9644.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:442:425,17:425:17019:17:645:0,-74.6914,-1471.96 0/1:700:635,65:635:25476:65:2585:-22.0632,0,-2079.79 0/0:522:501,21:501:20077:21:842:0,-81.0442,-1729.09 0/0:815:814,0:814:32540:0:0:0,-245.038,-2925.14 0/0:930:920,8:920:36850:8:305:0,-251.946,-3285.18 0/0:1149:1145,0:1145:45885:0:0:0,-344.679,-4124.77 dDocent_Contig_5882 54 . C T 1021.29 . AB=0.127601;ABP=871.506;AC=4;AF=0.333333;AN=12;AO=108;CIGAR=1X;DP=1097;DPB=1097;DPRA=0;EPP=237.529;EPPR=2148.43;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4236;QR=38201;RO=988;RPL=108;RPP=237.529;RPPR=2148.43;RPR=0;RUN=1;SAF=108;SAP=237.529;SAR=0;SRF=988;SRP=2148.43;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:154:140,14:140:5346:14:561:-4.47543,0,-434.702 0/0:236:225,10:225:8681:10:393:0,-35.2865,-745.164 0/1:153:133,20:133:5267:20:777:-24.1866,0,-427.841 0/1:273:232,41:232:8971:41:1603:-62.3282,0,-724.781 0/1:141:124,17:124:4796:17:672:-18.3604,0,-389.157 0/0:140:134,6:134:5140:6:230:0,-21.0803,-441.457 dDocent_Contig_5883 128 . T C 101.826 . AB=0.0384615;ABP=291.649;AC=0;AF=0;AN=12;AO=35;CIGAR=8M1X15M;DP=1666;DPB=1687.25;DPRA=0;EPP=79.0118;EPPR=2804.21;GTI=0;LEN=1;MEANALT=16;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1217;QR=42970;RO=1290;RPL=0;RPP=79.0118;RPPR=2804.21;RPR=35;RUN=1;SAF=0;SAP=79.0118;SAR=35;SRF=0;SRP=2804.21;SRR=1290;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:156:81,13,13,11,3,6:81:2709:13,13,11,3,6:441,288,188,82,209:-11.4044,0,-215.516,-13.784,-197.431,-229.287,-22.1887,-205.83,-219.601,-238.288,-29.3098,-212.954,-226.724,-235.123,-247.82,-18.7804,-202.43,-216.201,-224.6,-231.724,-236.393 0|0:191:146,7,3,5,1,7:146:4846:7,3,5,1,7:222,85,54,23,241:0,-26.0673,-416.119,-37.2004,-411.48,-428.444,-40.6102,-414.877,-425.998,-431.238,-42.1814,-416.457,-427.578,-430.974,-434.023,-24.3533,-398.649,-409.77,-413.166,-414.747,-414.409 0|0:211:162,5,8,1,11,1:162:5438:5,8,1,11,1:171,200,7,127,35:0,-34.8726,-473.979,-33.1708,-459.897,-471.37,-48.4409,-475.156,-473.45,-488.736,-40.6768,-467.376,-465.67,-480.929,-477.945,-45.9163,-472.636,-470.93,-486.189,-478.409,-486.216 0|0:296:213,2,6,8,7,18:213:7065:2,6,8,7,18:70,131,117,118,628:0,-58.4209,-629.441,-54.1373,-620.062,-623.951,-56.0064,-621.925,-617.64,-625.213,-55.6124,-621.534,-617.249,-619.112,-625.122,-13.0057,-578.96,-574.675,-576.539,-576.147,-579.237 0|0:377:344,0,5,8,0,2:344:11465:0,5,8,0,2:0,107,178,0,70:0,-103.554,-1031.65,-95.4298,-1023.53,-1022.02,-89.9399,-1018.04,-1009.92,-1015.64,-103.554,-1031.65,-1023.53,-1018.04,-1031.65,-97.8499,-1025.96,-1017.83,-1012.35,-1025.96,-1025.36 0|0:435:344,0,14,0,3,1:344:11447:0,14,0,3,1:0,223,0,46,34:0,-103.554,-1030.02,-87.7068,-1014.17,-1009.96,-103.554,-1030.02,-1014.17,-1030.02,-100.319,-1026.79,-1010.94,-1026.79,-1025.89,-100.795,-1027.27,-1011.42,-1027.27,-1024.03,-1026.97 dDocent_Contig_5884 1 . N G 76.8682 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5885 103 . N C 98.7115 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=2X3I3X;DP=3;DPB=4.8;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=54.6667;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=99;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:64:-6.06979,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_5886 15 . C G 3939.66 . AB=0.152658;ABP=1698.55;AC=2;AF=0.166667;AN=12;AO=248;CIGAR=1X;DP=3964;DPB=3964;DPRA=1.28736;EPP=541.535;EPPR=8067.86;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9835;QR=148270;RO=3714;RPL=0;RPP=541.535;RPPR=8067.86;RPR=248;RUN=1;SAF=248;SAP=541.535;SAR=0;SRF=3714;SRP=8067.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:433:433,0:433:17282:0:0:0,-130.346,-1553.97 0/0:567:566,0:566:22630:0:0:0,-170.383,-2034.32 0/0:613:612,1:612:24443:1:10:0,-183.531,-2196.67 0/0:733:733,0:733:29264:0:0:0,-220.655,-2631.07 0/1:734:664,69:664:26447:69:2755:-27.3133,0,-2157.13 0/1:884:706,178:706:28204:178:7070:-369.875,0,-2269.68 dDocent_Contig_5887 14 . G A 26843.6 . AB=0.441839;ABP=65.653;AC=6;AF=0.5;AN=12;AO=942;CIGAR=1X;DP=2132;DPB=2132;DPRA=0;EPP=2048.54;EPPR=2587.06;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.995754;PAIREDR=0.997479;PAO=0;PQA=0;PQR=0;PRO=0;QA=37095;QR=46465;RO=1190;RPL=0;RPP=2048.54;RPPR=2587.06;RPR=942;RUN=1;SAF=942;SAP=2048.54;SAR=0;SRF=1190;SRP=2587.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:261:100,161:100:3881:161:6327:-490.647,0,-270.761 0/1:580:327,253:327:12750:253:10011:-725.827,0,-972.108 0/1:127:67,60:67:2649:60:2371:-175.316,0,-200.31 0/1:609:357,252:357:13946:252:9908:-707.846,0,-1070.91 0/1:274:168,106:168:6525:106:4169:-292.732,0,-504.551 0/1:281:171,110:171:6714:110:4309:-303.212,0,-519.423 dDocent_Contig_5889 16 . G T 4931.74 . AB=0.0258303;ABP=532.249;AC=0;AF=0;AN=12;AO=7;CIGAR=2M1X1M7I1X1M1X1M1X1M1X2M1X4M;DP=654;DPB=713.444;DPRA=0;EPP=18.2106;EPPR=194.1;GTI=0;LEN=1;MEANALT=25;MQM=40;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=272;QR=3384;RO=88;RPL=0;RPP=18.2106;RPPR=194.1;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=88;SRP=194.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:85:6,0,3,3,31,0,0,0,0,2:6:238:0,3,3,31,0,0,0,0,2:0,116,111,1197,0,0,0,0,72:-89.7024,-91.5086,-111.102,-82.6202,-102.214,-101.311,-82.8987,-102.493,-93.6043,-101.59,0,-19.5942,-10.7064,-10.9852,-10.2623,-91.5086,-111.102,-102.214,-102.493,-19.5942,-111.102,-91.5086,-111.102,-102.214,-102.493,-19.5942,-111.102,-111.102,-91.5086,-111.102,-102.214,-102.493,-19.5942,-111.102,-111.102,-111.102,-91.5086,-111.102,-102.214,-102.493,-19.5942,-111.102,-111.102,-111.102,-111.102,-85.7994,-105.393,-96.5049,-96.7834,-13.8856,-105.393,-105.393,-105.393,-105.393,-104.791 0|0:151:14,0,0,6,46,0,3,0,0,0:14:527:0,0,6,46,0,3,0,0,0:0,0,219,1773,0,113,0,0,0:-131.465,-135.679,-178.858,-135.679,-178.858,-178.858,-118.65,-161.828,-161.828,-160.022,0,-43.1782,-43.1782,-26.1494,-29.3309,-135.679,-178.858,-178.858,-161.828,-43.1782,-178.858,-126.973,-170.152,-170.152,-153.122,-34.4725,-170.152,-169.249,-135.679,-178.858,-178.858,-161.828,-43.1782,-178.858,-170.152,-178.858,-135.679,-178.858,-178.858,-161.828,-43.1782,-178.858,-170.152,-178.858,-178.858,-135.679,-178.858,-178.858,-161.828,-43.1782,-178.858,-170.152,-178.858,-178.858,-178.858 0|0:120:21,2,0,6,28,0,4,0,0,0:21:812:2,0,6,28,0,4,0,0,0:61,0,205,1079,0,159,0,0,0:-76.0935,-77.6674,-143.763,-82.4152,-144.365,-149.113,-66.4653,-128.415,-133.163,-131.357,0,-61.9509,-66.6984,-50.7492,-58.2696,-82.4152,-144.365,-149.113,-133.163,-66.6984,-149.113,-70.3505,-132.301,-137.049,-121.099,-54.6341,-137.049,-135.845,-82.4152,-144.365,-149.113,-133.163,-66.6984,-149.113,-137.049,-149.113,-82.4152,-144.365,-149.113,-133.163,-66.6984,-149.113,-137.049,-149.113,-149.113,-82.4152,-144.365,-149.113,-133.163,-66.6984,-149.113,-137.049,-149.113,-149.113,-149.113 0|0:105:21,2,0,3,27,0,0,0,0,2:21:830:2,0,3,27,0,0,0,0,2:75,0,111,1051,0,0,0,0,75:-73.9165,-74.3804,-142.085,-80.2382,-142.687,-148.545,-71.6285,-134.078,-139.935,-139.032,0,-62.4487,-68.3061,-59.6969,-60.1783,-80.2382,-142.687,-148.545,-139.935,-68.3061,-148.545,-80.2382,-142.687,-148.545,-139.935,-68.3061,-148.545,-148.545,-80.2382,-142.687,-148.545,-139.935,-68.3061,-148.545,-148.545,-148.545,-80.2382,-142.687,-148.545,-139.935,-68.3061,-148.545,-148.545,-148.545,-148.545,-74.2927,-136.742,-142.6,-133.99,-62.3609,-142.6,-142.6,-142.6,-142.6,-141.998 0|0:85:19,0,0,7,17,0,0,2,0,0:19:710:0,0,7,17,0,0,2,0,0:0,0,259,652,0,0,73,0,0:-44.1384,-49.858,-107.987,-49.858,-107.987,-107.987,-29.7687,-87.897,-87.897,-85.7898,0,-58.1279,-58.1279,-38.0389,-53.0103,-49.858,-107.987,-107.987,-87.897,-58.1279,-107.987,-49.858,-107.987,-107.987,-87.897,-58.1279,-107.987,-107.987,-44.1805,-102.309,-102.309,-82.2194,-52.4504,-102.309,-102.309,-101.707,-49.858,-107.987,-107.987,-87.897,-58.1279,-107.987,-107.987,-102.309,-107.987,-49.858,-107.987,-107.987,-87.897,-58.1279,-107.987,-107.987,-102.309,-107.987,-107.987 0|0:108:7,0,0,2,31,4,0,0,4,0:7:267:0,0,2,31,4,0,0,4,0:0,0,74,1195,149,0,0,151,0:-89.0803,-91.1875,-113.09,-91.1875,-113.09,-113.09,-85.4475,-107.35,-107.35,-106.748,0,-21.9026,-21.9026,-16.1628,-12.5706,-79.607,-101.51,-101.51,-95.7697,-10.3226,-100.306,-91.1875,-113.09,-113.09,-107.35,-21.9026,-101.51,-113.09,-91.1875,-113.09,-113.09,-107.35,-21.9026,-101.51,-113.09,-113.09,-79.6012,-101.504,-101.504,-95.7639,-10.3168,-89.9234,-101.504,-101.504,-100.3,-91.1875,-113.09,-113.09,-107.35,-21.9026,-101.51,-113.09,-113.09,-101.504,-113.09 dDocent_Contig_5890 16 . G A 4914.16 . AB=0.0151515;ABP=407.299;AC=0;AF=0;AN=12;AO=3;CIGAR=3M3I3M1X2M3X1M1X4M;DP=989;DPB=1059;DPRA=0;EPP=9.52472;EPPR=263.587;GTI=0;LEN=1;MEANALT=34;MQM=40;MQMR=60;NS=6;NUMALT=10;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=11.5;PRO=0.5;QA=110;QR=4678;RO=120;RPL=0;RPP=9.52472;RPPR=263.587;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=120;SRP=263.587;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:169:18,3,0,3,0,39,0,0,0,0,0:18:704:3,0,3,0,39,0,0,0,0,0:108,0,111,0,1530,0,0,0,0,0:-111.06,-108.019,-164.998,-116.479,-165.902,-174.362,-107.869,-157.291,-165.752,-164.849,-116.479,-165.902,-174.362,-165.752,-174.362,0,-49.4229,-57.883,-49.2731,-57.883,-46.1428,-116.479,-165.902,-174.362,-165.752,-174.362,-57.883,-174.362,-116.479,-165.902,-174.362,-165.752,-174.362,-57.883,-174.362,-174.362,-116.479,-165.902,-174.362,-165.752,-174.362,-57.883,-174.362,-174.362,-174.362,-116.479,-165.902,-174.362,-165.752,-174.362,-57.883,-174.362,-174.362,-174.362,-174.362,-116.479,-165.902,-174.362,-165.752,-174.362,-57.883,-174.362,-174.362,-174.362,-174.362,-174.362 0|0:198:13,0,0,2,0,44,0,0,0,0,3:13:511:0,0,2,0,44,0,0,0,0,3:0,0,74,0,1697,0,0,0,0,110:-125.727,-129.64,-171.674,-129.64,-171.674,-171.674,-123.9,-165.933,-165.933,-165.331,-129.64,-171.674,-171.674,-165.933,-171.674,0,-42.0335,-42.0335,-36.2935,-42.0335,-28.7881,-129.64,-171.674,-171.674,-165.933,-171.674,-42.0335,-171.674,-129.64,-171.674,-171.674,-165.933,-171.674,-42.0335,-171.674,-171.674,-129.64,-171.674,-171.674,-165.933,-171.674,-42.0335,-171.674,-171.674,-171.674,-129.64,-171.674,-171.674,-165.933,-171.674,-42.0335,-171.674,-171.674,-171.674,-171.674,-121.101,-163.134,-163.134,-157.394,-163.134,-33.4945,-163.134,-163.134,-163.134,-163.134,-162.231 0|0:136:17,0,0,4,3,15,2,0,0,0,0:17:665:0,0,4,3,15,2,0,0,0,0:0,0,147,114,572,79,0,0,0,0:-38.1284,-43.2459,-97.9228,-43.2459,-97.9228,-97.9228,-31.8282,-86.505,-86.505,-85.3009,-34.4775,-89.1543,-89.1543,-77.7366,-88.2512,0,-54.6765,-54.6765,-43.259,-45.9082,-50.1611,-37.2376,-91.9144,-91.9144,-80.4967,-83.1459,-48.6683,-91.3123,-43.2459,-97.9228,-97.9228,-86.505,-89.1543,-54.6765,-91.9144,-97.9228,-43.2459,-97.9228,-97.9228,-86.505,-89.1543,-54.6765,-91.9144,-97.9228,-97.9228,-43.2459,-97.9228,-97.9228,-86.505,-89.1543,-54.6765,-91.9144,-97.9228,-97.9228,-97.9228,-43.2459,-97.9228,-97.9228,-86.505,-89.1543,-54.6765,-91.9144,-97.9228,-97.9228,-97.9228,-97.9228 0|0:218:22,0,5,1,2,42,0,0,4,0,0:22:847:0,5,1,2,42,0,0,4,0,0:0,198,27,79,1631,0,0,153,0,0:-117.86,-124.483,-194.024,-109.171,-178.712,-177.207,-122.374,-191.915,-176.603,-191.614,-118.475,-188.016,-172.704,-185.907,-187.414,0,-69.5411,-54.2291,-67.4318,-63.5327,-56.8978,-124.483,-194.024,-178.712,-191.915,-188.016,-69.5411,-194.024,-124.483,-194.024,-178.712,-191.915,-188.016,-69.5411,-194.024,-194.024,-112.724,-182.266,-166.954,-180.156,-176.257,-57.7826,-182.266,-182.266,-181.062,-124.483,-194.024,-178.712,-191.915,-188.016,-69.5411,-194.024,-194.024,-182.266,-194.024,-124.483,-194.024,-178.712,-191.915,-188.016,-69.5411,-194.024,-194.024,-182.266,-194.024,-194.024 0|0:84:20,1,0,9,0,20,0,0,0,2,0:20:788:1,0,9,0,20,0,0,0,2,0:39,0,327,0,777,0,0,0,80,0:-53.2397,-56.2425,-120.778,-59.2603,-121.079,-124.097,-33.8174,-95.6363,-98.654,-95.9447,-59.2603,-121.079,-124.097,-98.654,-124.097,0,-61.8204,-64.8381,-39.3968,-64.8381,-58.8175,-59.2603,-121.079,-124.097,-98.654,-124.097,-64.8381,-124.097,-59.2603,-121.079,-124.097,-98.654,-124.097,-64.8381,-124.097,-124.097,-59.2603,-121.079,-124.097,-98.654,-124.097,-64.8381,-124.097,-124.097,-124.097,-53.2041,-115.023,-118.041,-92.5981,-118.041,-58.7822,-118.041,-118.041,-118.041,-117.439,-59.2603,-121.079,-124.097,-98.654,-124.097,-64.8381,-124.097,-124.097,-124.097,-118.041,-124.097 0|0:184:30,1,3,9,0,22,0,4,0,0,0:30:1163:1,3,9,0,22,0,4,0,0,0:36,119,306,0,861,0,155,0,0,0:-56.6221,-62.8216,-158.065,-56.6164,-149.329,-151.258,-41.9251,-134.638,-128.433,-134.76,-65.653,-158.366,-152.161,-137.469,-161.197,0,-92.7134,-86.5083,-71.8169,-95.5448,-88.9222,-65.653,-158.366,-152.161,-137.469,-161.197,-95.5448,-161.197,-53.7939,-146.507,-140.302,-125.61,-149.338,-83.6858,-149.338,-148.134,-65.653,-158.366,-152.161,-137.469,-161.197,-95.5448,-161.197,-149.338,-161.197,-65.653,-158.366,-152.161,-137.469,-161.197,-95.5448,-161.197,-149.338,-161.197,-161.197,-65.653,-158.366,-152.161,-137.469,-161.197,-95.5448,-161.197,-149.338,-161.197,-161.197,-161.197 dDocent_Contig_5891 8 . C T 992.09 . AB=0.031746;ABP=122.993;AC=0;AF=0;AN=12;AO=2;CIGAR=2M3I1M1X4M5I4M1X2M3I4M;DP=221;DPB=234.211;DPRA=0;EPP=7.35324;EPPR=124.613;GTI=0;LEN=1;MEANALT=15;MQM=40;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=77;QR=2166;RO=56;RPL=0;RPP=7.35324;RPPR=124.613;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=56;SRP=124.613;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:35:7,0,0,3,5:7:274:0,0,3,5:0,0,112,199:-12.9853,-15.0925,-37.626,-15.0925,-37.626,-37.626,-6.44454,-28.978,-28.978,-28.0749,0,-22.5342,-22.5342,-13.8867,-21.029 0|0:35:8,0,0,0,5:8:305:0,0,0,5:0,0,0,199:-12.6881,-15.0964,-40.1218,-15.0964,-40.1218,-40.1218,-15.0964,-40.1218,-40.1218,-40.1218,0,-25.0275,-25.0275,-25.0275,-23.5223 0|0:21:7,0,0,0,5:7:254:0,0,0,5:0,0,0,189:-12.3641,-14.4713,-35.2019,-14.4713,-35.2019,-35.2019,-14.4713,-35.2019,-35.2019,-35.2019,0,-20.7222,-20.7222,-20.7222,-19.2171 0|0:63:8,2,2,1,17:8:313:2,2,1,17:75,77,39,658:-47.8105,-44.3611,-69.497,-44.3109,-64.1913,-69.4469,-47.2384,-67.1188,-67.0687,-72.6754,0,-19.8807,-19.8305,-22.7577,-20.6203 0|0:26:10,0,0,1,4:10:395:0,0,1,4:0,0,40,157:-8.95197,-11.9623,-44.4757,-11.9623,-44.4757,-44.4757,-8.93436,-41.4481,-41.4481,-41.147,0,-32.514,-32.514,-29.4866,-31.3099 0|0:41:16,0,0,3,7:16:625:0,0,3,7:0,0,114,267:-15.6309,-20.4474,-71.8383,-20.4474,-71.8383,-71.8383,-11.6847,-63.0758,-63.0758,-62.1727,0,-51.3913,-51.3913,-42.6295,-49.2841 dDocent_Contig_5892 209 . N G 505.524 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=26;CIGAR=1X;DP=26;DPB=26;DPRA=0;EPP=59.4686;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=21.8077;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1009;QR=0;RO=0;RPL=26;RPP=59.4686;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=59.4686;SAR=26;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:8:0,8:0:0:8:316:-18.1741,-2.40824,0 1/1:10:0,10:0:0:10:377:-18.9285,-3.0103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:39:-3.4236,-0.30103,0 1/1:1:0,1:0:0:1:41:-1.29935,-0.30103,0 1/1:6:0,6:0:0:6:236:-8.0227,-1.80618,0 dDocent_Contig_5893 8 . C A 3024.96 . AB=0.09375;ABP=1058.07;AC=1;AF=0.0833333;AN=12;AO=69;CIGAR=1M3X1M1X2M3I2M1X1M1D4M;DP=736;DPB=792.765;DPRA=0;EPP=152.842;EPPR=419.933;GTI=0;LEN=1;MEANALT=23.5;MQM=40;MQMR=60;NS=6;NUMALT=8;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2698;QR=7449;RO=192;RPL=0;RPP=152.842;RPPR=419.933;RPR=69;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=192;SRP=419.933;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:125:38,3,11,0,17,0,0,0,0:38:1494:3,11,0,17,0,0,0,0:116,428,0,668,0,0,0,0:-39.4499,-42.0007,-163.995,-18.198,-132.207,-137.784,-50.889,-164.898,-141.095,-173.786,0,-114.009,-90.2069,-122.897,-117.78,-50.889,-164.898,-141.095,-173.786,-122.897,-173.786,-50.889,-164.898,-141.095,-173.786,-122.897,-173.786,-173.786,-50.889,-164.898,-141.095,-173.786,-122.897,-173.786,-173.786,-173.786,-50.889,-164.898,-141.095,-173.786,-122.897,-173.786,-173.786,-173.786,-173.786 0|1:165:35,1,29,0,28,0,0,0,0:35:1327:1,29,0,28,0,0,0,0:40,1134,0,1096,0,0,0,0:-75.9222,-83.4303,-191.922,0,-105.764,-100.063,-86.4583,-192.223,-108.792,-195.251,-3.02954,-108.794,-25.3644,-111.822,-103.393,-86.4583,-192.223,-108.792,-195.251,-111.822,-195.251,-86.4583,-192.223,-108.792,-195.251,-111.822,-195.251,-195.251,-86.4583,-192.223,-108.792,-195.251,-111.822,-195.251,-195.251,-195.251,-86.4583,-192.223,-108.792,-195.251,-111.822,-195.251,-195.251,-195.251,-195.251 0|0:102:17,8,2,0,17,0,0,3,2:17:669:8,2,0,17,0,0,3,2:301,79,0,662,0,0,119,78:-45.3057,-27.3095,-79.9383,-44.4148,-76.3382,-98.85,-50.4232,-82.3465,-99.452,-105.46,0,-31.9241,-49.029,-55.0372,-49.9197,-50.4232,-82.3465,-99.452,-105.46,-55.0372,-105.46,-50.4232,-82.3465,-99.452,-105.46,-55.0372,-105.46,-105.46,-41.3868,-73.3103,-90.4157,-96.424,-46.0011,-96.424,-96.424,-95.5209,-44.3229,-76.2463,-93.3517,-99.3601,-48.937,-99.3601,-99.3601,-90.3237,-98.758 0|0:115:29,8,14,0,22,0,3,0,0:29:1102:8,14,0,22,0,3,0,0:311,546,0,854,0,115,0,0:-56.429,-41.3928,-129.358,-23.4925,-90.0998,-109.651,-65.1589,-131.766,-113.866,-155.532,0,-66.6074,-48.7074,-90.373,-83.7503,-65.1589,-131.766,-113.866,-155.532,-90.373,-155.532,-56.2303,-122.837,-104.937,-146.603,-81.4446,-146.603,-145.7,-65.1589,-131.766,-113.866,-155.532,-90.373,-155.532,-146.603,-155.532,-65.1589,-131.766,-113.866,-155.532,-90.373,-155.532,-146.603,-155.532,-155.532 0|0:94:35,7,6,4,10,2,0,0,0:35:1367:7,6,4,10,2,0,0,0:273,239,152,394,72,0,0,0:-19.4486,-9.13198,-119.412,-11.8638,-103.399,-122.445,-18.325,-109.86,-112.592,-129.508,0,-91.536,-94.2678,-100.729,-109.378,-24.436,-115.971,-118.703,-125.163,-106.839,-136.221,-29.9847,-121.52,-124.251,-130.712,-112.388,-136.823,-142.372,-29.9847,-121.52,-124.251,-130.712,-112.388,-136.823,-142.372,-142.372,-29.9847,-121.52,-124.251,-130.712,-112.388,-136.823,-142.372,-142.372,-142.372 0|0:135:38,8,7,0,30,0,0,0,0:38:1490:8,7,0,30,0,0,0,0:316,272,0,1161,0,0,0,0:-77.1619,-64.5723,-184.704,-67.8396,-166.351,-188.272,-88.6011,-187.112,-190.379,-211.14,0,-98.5115,-101.779,-122.539,-113.509,-88.6011,-187.112,-190.379,-211.14,-122.539,-211.14,-88.6011,-187.112,-190.379,-211.14,-122.539,-211.14,-211.14,-88.6011,-187.112,-190.379,-211.14,-122.539,-211.14,-211.14,-211.14,-88.6011,-187.112,-190.379,-211.14,-122.539,-211.14,-211.14,-211.14,-211.14 dDocent_Contig_5894 130 . T C 141.148 . AB=0.195652;ABP=40.0197;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=243;DPB=243;DPRA=1.16751;EPP=22.5536;EPPR=511.135;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.777778;PAIREDR=0.858974;PAO=0;PQA=0;PQR=0;PRO=0;QA=324;QR=9258;RO=234;RPL=9;RPP=22.5536;RPPR=511.135;RPR=0;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=511.135;SRR=234;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:40,0:40:1541:0:0:0,-12.0412,-138.943 0/0:41:41,0:41:1634:0:0:0,-12.3422,-147.294 0/0:25:25,0:25:997:0:0:0,-7.52575,-90.0297 0/0:53:53,0:53:2103:0:0:0,-15.9546,-189.461 0/0:38:38,0:38:1527:0:0:0,-11.4391,-137.672 0/1:46:37,9:37:1456:9:324:-15.6377,0,-117.439 dDocent_Contig_5895 9 . G A 402.072 . AB=0.101925;ABP=1218.37;AC=3;AF=0.25;AN=12;AO=134;CIGAR=1X;DP=1687;DPB=1687;DPRA=0;EPP=293.988;EPPR=3375.31;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99678;PAO=0;PQA=0;PQR=0;PRO=0;QA=5134;QR=59207;RO=1553;RPL=0;RPP=293.988;RPPR=3375.31;RPR=134;RUN=1;SAF=134;SAP=293.988;SAR=0;SRF=1553;SRP=3375.31;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:226:210,16:210:8003:16:602:0,-13.5159,-665.57 0/0:294:279,15:279:10684:15:578:0,-36.1405,-908.799 0/1:258:235,23:235:8990:23:888:-2.57313,0,-731.165 0/1:335:303,32:303:11515:32:1216:-8.88921,0,-935.073 0/0:284:271,13:271:10311:13:506:0,-39.6032,-881.747 0/1:290:255,35:255:9704:35:1344:-33.9478,0,-785.745 dDocent_Contig_5896 9 . G A 155.395 . AB=0.101744;ABP=476.922;AC=1;AF=0.0833333;AN=12;AO=104;CIGAR=1X;DP=1992;DPB=1992;DPRA=1.64444;EPP=228.843;EPPR=4100.58;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.99947;PAO=0;PQA=0;PQR=0;PRO=0;QA=4000;QR=71924;RO=1887;RPL=0;RPP=228.843;RPPR=4100.58;RPR=104;RUN=1;SAF=104;SAP=228.843;SAR=0;SRF=1887;SRP=4100.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:215:204,11:204:7771:11:422:0,-26.3885,-660.883 0/0:375:350,25:350:13347:25:966:0,-25.6337,-1113.4 0/1:344:308,35:308:11764:35:1338:-17.0624,0,-954.641 0/0:470:460,10:460:17478:10:387:0,-106.297,-1536.97 0/0:216:216,0:216:8317:0:0:0,-65.0225,-748.299 0/0:372:349,23:349:13247:23:887:0,-31.8331,-1111.53 dDocent_Contig_5897 11 . G A 438.371 . AB=0.246753;ABP=45.9039;AC=1;AF=0.0833333;AN=12;AO=21;CIGAR=1X;DP=408;DPB=408;DPRA=1.34483;EPP=48.6112;EPPR=841.199;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997409;PAO=0;PQA=0;PQR=0;PRO=0;QA=838;QR=15325;RO=386;RPL=0;RPP=48.6112;RPPR=841.199;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=386;SRP=841.199;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:44,0:44:1714:0:0:0,-13.2453,-154.49 0/0:58:58,0:58:2291:0:0:0,-17.4597,-206.353 0/0:99:98,1:98:3885:1:40:0,-25.8063,-345.66 0/0:72:72,0:72:2890:0:0:0,-21.6742,-260.199 0/0:58:56,1:56:2219:1:40:0,-13.5626,-195.886 0/1:77:58,19:58:2326:19:758:-45.36,0,-186.323 dDocent_Contig_5900 98 . N C 175.455 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=33.1111;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=272;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:23:-2.29991,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:7:0,7:0:0:7:214:-11.1433,-2.10721,0 dDocent_Contig_5905 106 . N T 43.6979 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=58;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0.5;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=46;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:46:-4.36869,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5908 185 . C A 297.498 . AB=0.625;ABP=5.18177;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=241;DPB=241;DPRA=0.355556;EPP=24.725;EPPR=504.62;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=397;QR=8963;RO=231;RPL=10;RPP=24.725;RPPR=504.62;RPR=0;RUN=1;SAF=0;SAP=24.725;SAR=10;SRF=0;SRP=504.62;SRR=231;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:60:60,0:60:2319:0:0:0,-18.0618,-208.884 0/0:36:36,0:36:1395:0:0:0,-10.8371,-125.809 0/0:57:57,0:57:2191:0:0:0,-17.1587,-197.364 0/0:49:49,0:49:1925:0:0:0,-14.7505,-173.47 0/1:16:6,10:6:233:10:397:-31.2727,0,-16.5208 0/0:23:23,0:23:900:0:0:0,-6.92369,-81.3067 dDocent_Contig_5909 7 . A T 5297.25 . AB=0.326807;ABP=176.009;AC=6;AF=0.5;AN=12;AO=217;CIGAR=1X;DP=664;DPB=664;DPRA=0;EPP=474.22;EPPR=973.658;GTI=0;LEN=1;MEANALT=1;MQM=59.6866;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.986175;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8224;QR=16854;RO=447;RPL=0;RPP=474.22;RPPR=973.658;RPR=217;RUN=1;SAF=217;SAP=474.22;SAR=0;SRF=447;SRP=973.658;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:76:50,26:50:1900:26:977:-65.3603,0,-148.368 0/1:78:52,26:52:1986:26:973:-63.3717,0,-155.503 0/1:61:46,15:46:1755:15:575:-33.7299,0,-139.845 0/1:118:64,54:64:2415:54:2058:-149.932,0,-182.036 0/1:201:148,53:148:5533:53:2006:-120.274,0,-437.465 0/1:130:87,43:87:3265:43:1635:-108.279,0,-254.878 dDocent_Contig_5910 37 . C T 4558.94 . AB=0.159917;ABP=970.42;AC=4;AF=0.333333;AN=12;AO=154;CIGAR=2X2M;DP=1199;DPB=1199;DPRA=0;EPP=337.417;EPPR=1955.16;GTI=0;LEN=1;MEANALT=3.6;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=1.11022e-16;PAIRED=0.993506;PAIREDR=0.997775;PAO=0;PQA=0;PQR=0;PRO=0;QA=6077;QR=35631;RO=899;RPL=0;RPP=337.417;RPPR=1955.16;RPR=154;RUN=1;SAF=154;SAP=337.417;SAR=0;SRF=899;SRP=1955.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:128:80,1,44,0,3:80:3166:1,44,0,3:40,1721,0,119:-117.39,-138.177,-398.432,0,-257.257,-247.306,-141.472,-398.733,-260.552,-402.028,-131.676,-388.937,-250.756,-392.232,-391.329 0|1:219:160,4,54,0,0:160:6333:4,54,0,0:160,2144,0,0:-128.326,-163.31,-683.298,0,-508.012,-504.937,-176.491,-684.502,-521.192,-697.682,-176.491,-684.502,-521.192,-697.682,-697.682 0|1:118:81,7,22,0,7:81:3242:7,22,0,7:276,878,0,284:-47.9287,-49.6046,-314.563,0,-244.359,-260.444,-72.3121,-316.67,-267.067,-339.379,-48.8889,-293.249,-243.645,-315.957,-313.85 0|1:217:166,7,30,0,14:166:6549:7,30,0,14:269,1182,0,560:-47.2651,-75.1558,-611.87,0,-516.741,-529.791,-97.236,-613.977,-538.822,-636.059,-51.1056,-567.848,-492.693,-589.93,-585.715 0|0:236:186,0,0,50,0:186:7372:0,0,50,0:0,0,1978,0:-107.184,-163.175,-769.934,-163.175,-769.934,-769.934,0,-607.154,-607.154,-592.103,-163.175,-769.934,-769.934,-607.154,-769.934 0|0:281:226,0,4,28,21:226:8969:0,4,28,21:0,152,1062,840:-19.0226,-87.0554,-825.368,-74.5915,-812.904,-811.699,0,-738.305,-725.841,-729.876,-17.8569,-756.176,-743.712,-669.114,-749.855 dDocent_Contig_5911 26 . T C 34.043 . AB=0.00877193;ABP=241.948;AC=0;AF=0;AN=12;AO=17;CIGAR=2M1X3M;DP=1562;DPB=1545;DPRA=0.333511;EPP=39.9253;EPPR=3281.93;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.999338;PAO=0;PQA=0;PQR=0;PRO=0;QA=675;QR=59606;RO=1510;RPL=0;RPP=39.9253;RPPR=3281.93;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=1510;SRP=3281.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:114:102,11,1:102:4018:11,1:430,41:-4.62597,0,-327.202,-31.9454,-327.129,-362.176 0|0:204:190,8,6:190:7513:8,6:318,243:0,-31.0204,-646.873,-37.155,-629.244,-653.617 0|0:106:96,3,7:96:3762:3,7:116,268:0,-19.3701,-327.82,-6.91625,-306.738,-314.158 0|0:201:188,10,3:188:7468:10,3:401,123:0,-23.5615,-635.345,-46.4393,-628.203,-660.339 0|0:449:446,2,0:446:17555:2,0:82,0:0,-127.485,-1570.95,-134.259,-1571.55,-1578.32 0|0:488:488,0,0:488:19290:0,0:0,0:0,-146.903,-1734.68,-146.903,-1734.68,-1734.68 dDocent_Contig_5912 10 . C A 5284.76 . AB=0.520115;ABP=4.23331;AC=6;AF=0.5;AN=12;AO=181;CIGAR=1X;DP=348;DPB=348;DPRA=0;EPP=396.047;EPPR=365.646;GTI=0;LEN=1;MEANALT=1;MQM=59.9669;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.745856;PAIREDR=0.868263;PAO=0;PQA=0;PQR=0;PRO=0;QA=7142;QR=6618;RO=167;RPL=0;RPP=396.047;RPPR=365.646;RPR=181;RUN=1;SAF=181;SAP=396.047;SAR=0;SRF=167;SRP=365.646;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:40:26,14:26:1014:14:552:-37.9804,0,-79.5079 0/1:78:29,49:29:1158:49:1926:-150.069,0,-81.0202 0/1:35:15,20:15:564:20:814:-63.0381,0,-40.5523 0/1:86:53,33:53:2116:33:1320:-93.1774,0,-164.734 0/1:46:21,25:21:839:25:973:-74.0228,0,-61.9754 0/1:63:23,40:23:927:40:1557:-121.41,0,-64.765 dDocent_Contig_5913 121 . T A 2889.61 . AB=0.0518018;ABP=2327.13;AC=0;AF=0;AN=12;AO=79;CIGAR=1X3M1X9M;DP=2055;DPB=1768.14;DPRA=0;EPP=174.557;EPPR=2854.15;GTI=0;LEN=1;MEANALT=9;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=2.22045e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2574;QR=43507;RO=1313;RPL=0;RPP=174.557;RPPR=2854.15;RPR=79;RUN=1;SAF=0;SAP=174.557;SAR=79;SRF=0;SRP=2854.15;SRR=1313;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:272:208,17,2,20,21:208:6875:17,2,20,21:545,66,471,735:0,-18.6886,-569.563,-57.2768,-569.344,-612.659,-26.2759,-538.321,-576.901,-576.217,-2.78967,-514.879,-553.46,-522.437,-552.474 0|0:450:301,16,5,73,47:301:10016:16,5,73,47:511,168,1710,1657:-44.3414,-93.7875,-899.579,-121.339,-890.785,-930.439,-3.08084,-772.499,-800.047,-791.682,0,-769.474,-797.022,-678.737,-796.484 0|0:222:115,20,1,60,23:115:3828:20,1,60,23:627,34,1442,801:-77.0443,-61.2618,-365.078,-108.904,-368.34,-418.432,0,-259.419,-307.051,-291.747,-46.5066,-305.957,-353.592,-244.669,-349.427 0|0:451:339,31,8,29,28:339:11260:31,8,29,28:1045,268,684,981:0,-17.3422,-919.12,-80.3408,-906.747,-989.028,-49.2412,-875.633,-938.616,-951.591,-22.2054,-848.628,-911.612,-880.497,-924.888 0|0:276:146,47,31,46,0:146:4787:47,31,46,0:1569,1017,1134,0:-83.0894,0,-372.652,-44.8551,-304.623,-422.313,-38.8612,-298.612,-343.456,-411.783,-127.04,-386.8,-431.645,-425.63,-513.82 0|0:384:204,59,32,81,0:204:6741:59,32,81,0:1899,1021,1947,0:-91.707,0,-527.392,-70.8761,-462.919,-606.384,-2.31535,-394.341,-465.205,-523.053,-153.117,-545.152,-616.017,-547.436,-698.251 dDocent_Contig_5914 89 . G A 1477.02 . AB=0.195122;ABP=433.333;AC=4;AF=0.333333;AN=12;AO=129;CIGAR=1X;DP=833;DPB=833;DPRA=0;EPP=283.13;EPPR=1529.56;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.992248;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4349;QR=23902;RO=703;RPL=129;RPP=283.13;RPPR=1529.56;RPR=0;RUN=1;SAF=129;SAP=283.13;SAR=0;SRF=703;SRP=1529.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:96:72,24:72:2478:24:819:-45.1251,0,-194.385 0/0:133:122,11:122:4155:11:381:0,-5.41336,-339.533 0/1:89:73,15:73:2476:15:510:-19.3839,0,-196.261 0/1:189:165,24:165:5559:24:774:-13.065,0,-443.578 0/0:167:153,14:153:5175:14:477:0,-7.01682,-422.668 0/1:159:118,41:118:4059:41:1388:-77.3501,0,-317.658 dDocent_Contig_5915 51 . C A 6398.98 . AB=0.434615;ABP=22.3197;AC=3;AF=0.25;AN=12;AO=245;CIGAR=1X;DP=1007;DPB=1007;DPRA=0;EPP=535.021;EPPR=1657.67;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997375;PAO=0;PQA=0;PQR=0;PRO=0;QA=9636;QR=29820;RO=762;RPL=245;RPP=535.021;RPPR=1657.67;RPR=0;RUN=1;SAF=245;SAP=535.021;SAR=0;SRF=762;SRP=1657.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:139:132,7:132:5181:7:279:0,-16.3636,-440.698 0/0:198:191,7:191:7536:7:282:0,-33.8512,-652.136 0/1:204:175,29:175:6802:29:1128:-40.3926,0,-550.506 0/0:150:145,5:145:5643:5:171:0,-29.4404,-492.014 0/1:152:68,84:68:2650:84:3304:-251.675,0,-192.883 0/1:164:51,113:51:2008:113:4472:-353.053,0,-131.551 dDocent_Contig_5916 9 . G A 3595.2 . AB=0.188157;ABP=887.38;AC=2;AF=0.166667;AN=12;AO=200;CIGAR=1X;DP=3333;DPB=3333;DPRA=1.30357;EPP=437.305;EPPR=6806.23;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.95;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7647;QR=119632;RO=3133;RPL=0;RPP=437.305;RPPR=6806.23;RPR=200;RUN=1;SAF=200;SAP=437.305;SAR=0;SRF=3133;SRP=6806.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:468:468,0:468:17915:0:0:0,-140.882,-1611.42 0/0:587:585,2:585:22308:2:78:0,-169.301,-1999.09 0/0:456:456,0:456:17531:0:0:0,-137.27,-1576.87 0/0:775:774,1:774:29507:1:39:0,-229.402,-2650 0/1:285:255,30:255:9765:30:1151:-18.0971,0,-792.732 0/1:762:595,167:595:22606:167:6379:-344.644,0,-1803.92 dDocent_Contig_5917 15 . C A 41.2309 . AB=0.0970874;ABP=148.246;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=252;DPB=252;DPRA=1.38255;EPP=24.725;EPPR=528.507;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.4545;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.867769;PAO=0;PQA=0;PQR=0;PRO=0;QA=401;QR=9638;RO=242;RPL=0;RPP=24.725;RPPR=528.507;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=242;SRP=528.507;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1392:0:0:0,-10.536,-125.336 0/0:51:51,0:51:2040:0:0:0,-15.3525,-183.782 0/0:24:24,0:24:965:0:0:0,-7.22472,-87.1487 0/1:42:37,5:37:1480:5:199:-5.6448,0,-120.797 0/0:39:39,0:39:1576:0:0:0,-11.7402,-141.617 0/1:61:56,5:56:2185:5:202:-0.199249,0,-178.358 dDocent_Contig_5918 21 . T C 87.1897 . AB=0.0882883;ABP=820.145;AC=1;AF=0.0833333;AN=12;AO=178;CIGAR=1X;DP=4600;DPB=4600;DPRA=0;EPP=389.532;EPPR=9600.92;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999321;PAO=0;PQA=0;PQR=0;PRO=0;QA=7084;QR=177159;RO=4420;RPL=0;RPP=389.532;RPPR=9600.92;RPR=178;RUN=1;SAF=178;SAP=389.532;SAR=0;SRF=4420;SRP=9600.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:324:297,27:297:11863:27:1071:0,-0.855417,-970.132 0/1:555:506,49:506:20366:49:1968:-10.2418,0,-1664.05 0/0:473:451,22:451:18023:22:896:0,-61.4422,-1539.59 0/0:976:903,72:903:36199:72:2847:0,-37.5915,-2998.11 0/0:947:946,1:946:37957:1:40:0,-281.08,-3408.45 0/0:1325:1317,7:1317:52751:7:262:0,-375.042,-4718.4 dDocent_Contig_5919 63 . C T 1623.71 . AB=0.151986;ABP=1221.2;AC=3;AF=0.25;AN=12;AO=203;CIGAR=1X;DP=2638;DPB=2638;DPRA=0.688288;EPP=443.819;EPPR=5279.69;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.985222;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6625;QR=89131;RO=2430;RPL=203;RPP=443.819;RPPR=5279.69;RPR=0;RUN=1;SAF=203;SAP=443.819;SAR=0;SRF=2430;SRP=5279.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:276:238,37:238:8622:37:1186:-24.1628,0,-692.987 0/0:370:343,27:343:12431:27:901:0,-29.9896,-1037.05 0/1:201:176,25:176:6563:25:855:-16.7539,0,-530.101 0/1:681:567,114:567:20960:114:3683:-126.676,0,-1680.41 0/0:506:504,0:504:18534:0:0:0,-151.719,-1667.05 0/0:604:602,0:602:22021:0:0:0,-181.22,-1980.79 dDocent_Contig_5920 33 . G A 788.886 . AB=0.121916;ABP=858.492;AC=6;AF=0.5;AN=12;AO=84;CIGAR=1X;DP=689;DPB=689;DPRA=0;EPP=185.414;EPPR=1314.58;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.916667;PAIREDR=0.912252;PAO=0;PQA=0;PQR=0;PRO=0;QA=3284;QR=23411;RO=604;RPL=0;RPP=185.414;RPPR=1314.58;RPR=84;RUN=1;SAF=84;SAP=185.414;SAR=0;SRF=604;SRP=1314.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:110:100,10:100:3901:10:391:-2.4309,0,-317.995 0/1:135:121,14:121:4699:14:542:-8.48278,0,-382.229 0/1:139:121,17:121:4648:17:681:-19.6688,0,-376.329 0/1:163:147,16:147:5658:16:619:-6.97422,0,-460.003 0/1:72:57,15:57:2237:15:583:-31.1317,0,-179.833 0/1:70:58,12:58:2268:12:468:-21.396,0,-183.22 dDocent_Contig_5921 98 . N C 511.916 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=20;CIGAR=1X;DP=23;DPB=23;DPRA=0;EPP=46.4397;EPPR=0;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=548;QR=0;RO=0;RPL=20;RPP=46.4397;RPPR=0;RPR=0;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,1:0:0:1:35:-3.24039,-0.30103,0 1/1:4:0,4:0:0:4:140:-12.9449,-1.20412,0 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 1/1:6:0,6:0:0:6:125:-11.4554,-1.80618,0 1/1:7:0,7:0:0:7:206:-18.8286,-2.10721,0 1/1:2:0,1:0:0:1:35:-3.2287,-0.30103,0 dDocent_Contig_5922 81 . C T 162.835 . AB=0.204082;ABP=40.2799;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=365;DPB=365;DPRA=0.78626;EPP=29.068;EPPR=769.54;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.657224;PAO=0;PQA=0;PQR=0;PRO=0;QA=424;QR=12704;RO=353;RPL=4;RPP=5.9056;RPPR=6.26443;RPR=8;RUN=1;SAF=4;SAP=5.9056;SAR=8;SRF=165;SRP=6.26443;SRR=188;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:64:64,0:64:2301:0:0:0,-19.2659,-207.314 0/0:75:75,0:75:2718:0:0:0,-22.5772,-244.819 0/0:31:31,0:31:1176:0:0:0,-9.33193,-106.131 0/0:92:92,0:92:3250:0:0:0,-27.6948,-292.658 0/0:54:52,2:52:1873:2:66:0,-9.98731,-162.55 0/1:49:39,10:39:1386:10:358:-17.8064,0,-110.267 dDocent_Contig_5923 15 . G A 505.097 . AB=0.096745;ABP=1565.18;AC=1;AF=0.0833333;AN=12;AO=155;CIGAR=1X;DP=5274;DPB=5274;DPRA=1.70054;EPP=339.589;EPPR=11047.1;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99882;PAO=0;PQA=0;PQR=0;PRO=0;QA=6169;QR=202003;RO=5086;RPL=0;RPP=339.589;RPPR=11047.1;RPR=155;RUN=1;SAF=155;SAP=339.589;SAR=0;SRF=5086;SRP=11047.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:555:555,0:555:22046:0:0:0,-167.072,-1982.3 0/0:1043:1018,25:1018:40548:25:998:0,-223.858,-3555.39 0/0:724:674,18:674:26776:18:694:0,-145.925,-2344.68 0/1:1106:999,107:999:39576:107:4278:-52.0326,0,-3225.28 0/0:785:784,1:784:31199:1:40:0,-232.313,-2801.09 0/0:1061:1056,4:1056:41858:4:159:0,-304.743,-3748.65 dDocent_Contig_5924 27 . C A 104765 . AB=0.578637;ABP=230.802;AC=12;AF=1;AN=12;AO=2454;CIGAR=1X12M;DP=4241;DPB=3898.23;DPRA=0;EPP=5331.8;EPPR=721.768;GTI=0;LEN=1;MEANALT=8.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=97505;QR=12503;RO=331;RPL=0;RPP=5331.8;RPPR=721.768;RPR=2454;RUN=1;SAF=2454;SAP=5331.8;SAR=0;SRF=331;SRP=721.768;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:575:36,75,82,376:36:1353:75,82,376:2951,3199,14958:-1372.79,-1140.89,-1229.15,-1120.69,-988.787,-1206.85,-152.103,-20.1962,0,-149.757 1|1:639:6,93,102,437:6:233:93,102,437:3672,3980,17336:-1733.11,-1432.78,-1423.93,-1407.8,-1124.8,-1396.24,-307.978,-24.9823,0,-195.573 1|1:539:11,51,119,351:11:422:51,119,351:2030,4708,13950:-1497.89,-1334.06,-1353.34,-1113.76,-981.248,-1112.57,-352.815,-220.3,0,-281.789 1|1:752:85,42,157,460:85:3175:42,157,460:1656,6150,18284:-1725.37,-1614.71,-1862.02,-1245.29,-1368.99,-1457.97,-245.737,-369.435,0,-367.208 1|1:813:91,36,254,422:91:3431:36,254,422:1422,9966,16839:-1897.79,-1808.17,-2078.49,-1105.63,-1269.77,-1310.32,-538.414,-702.555,0,-692.532 1|1:923:102,12,395,408:102:3889:12,395,408:467,15588,16138:-2260.78,-2253.11,-2568.52,-1008.95,-1289.6,-1209.06,-963.528,-1244.18,0,-1159.73 dDocent_Contig_5925 181 . T C 41.2724 . AB=0.205128;ABP=32.4644;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=109;DPB=109;DPRA=1.01111;EPP=35.5824;EPPR=207.129;GTI=0;LEN=1;MEANALT=1;MQM=25.4;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.6;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=527;QR=3550;RO=94;RPL=15;RPP=35.5824;RPPR=207.129;RPR=0;RUN=1;SAF=0;SAP=35.5824;SAR=15;SRF=0;SRP=207.129;SRR=94;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:20,6:20:758:6:226:-5.28673,0,-60.7046 0/0:22:18,4:18:710:4:162:0,-1.71788,-59.3173 0/1:13:11,2:11:382:2:81:-1.96633,0,-30.7789 0/0:18:18,0:18:690:0:0:0,-5.41854,-62.4187 0/0:22:20,2:20:732:2:51:0,-5.10275,-64.6615 0/0:8:7,1:7:278:1:7:0,-1.72186,-24.7029 dDocent_Contig_5926 43 . T C 99.9262 . AB=0.133333;ABP=90.593;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=358;DPB=358;DPRA=1.01356;EPP=33.4109;EPPR=730.555;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994169;PAO=0;PQA=0;PQR=0;PRO=0;QA=547;QR=12396;RO=343;RPL=0;RPP=33.4109;RPPR=730.555;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=343;SRP=747.825;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:51:44,7:44:1555:7:277:-9.94462,0,-124.865 0/0:86:85,1:85:3040:1:41:0,-21.794,-269.694 0/0:59:59,0:59:2114:0:0:0,-17.7608,-190.5 0/0:105:103,2:103:3741:2:81:0,-23.9224,-329.141 0/1:24:20,3:20:739:3:111:-3.26594,0,-59.8061 0/0:33:32,1:32:1207:1:37:0,-6.23616,-105.226 dDocent_Contig_5927 36 . T C 429.767 . AB=0.0508475;ABP=209.779;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=1X1M;DP=266;DPB=266;DPRA=1.41818;EPP=18.2106;EPPR=517.649;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.890295;PAO=0;PQA=0;PQR=0;PRO=0;QA=283;QR=9360;RO=237;RPL=0;RPP=18.2106;RPPR=517.649;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=237;SRP=517.649;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:36:36,0,0:36:1432:0,0:0,0:0,-10.8371,-129.135,-10.8371,-129.135,-129.135 0|0:39:39,0,0:39:1547:0,0:0,0:0,-11.7402,-139.47,-11.7402,-139.47,-139.47 0|0:38:37,0,1:37:1469:0,1:0,41:0,-11.1381,-132.048,-7.34457,-128.664,-128.363 0|0:35:35,0,0:35:1400:0,0:0,0:0,-10.536,-126.254,-10.536,-126.254,-126.254 0|1:42:32,7,3:32:1243:7,3:284,119:-13.7949,0,-100.01,-13.6354,-92.3213,-114.843 0|1:76:58,15,3:58:2269:15,3:605,123:-32.4036,0,-182.004,-39.71,-176.366,-225.334 dDocent_Contig_5928 25 . G C 37.3005 . AB=0.0739437;ABP=1346.36;AC=0;AF=0;AN=12;AO=152;CIGAR=1M2I2M3X2M1X;DP=5071;DPB=5104.67;DPRA=0.921244;EPP=333.074;EPPR=10124.2;GTI=0;LEN=1;MEANALT=8;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5808;QR=182292;RO=4661;RPL=0;RPP=333.074;RPPR=10124.2;RPR=152;RUN=1;SAF=152;SAP=333.074;SAR=0;SRF=4661;SRP=10124.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:724:658,46,12,4:658:25716:46,12,4:1750,471,163:0,-54.5381,-2154.83,-159.345,-2129.95,-2269.87,-184.629,-2155.23,-2260.03,-2297.56 0|0:852:715,63,0,67:715:27883:63,0,67:2408,0,2677:-5.25285,-22.9059,-2295.77,-220.489,-2314.73,-2512.32,0,-2094.25,-2291.84,-2271.67 0|0:803:749,25,1,23:749:29319:25,1,23:957,41,916:0,-146.94,-2550.08,-222.087,-2554.22,-2632.45,-150.043,-2482.18,-2557.33,-2553.79 0|0:908:829,18,39,15:829:32492:18,39,15:693,1562,597:0,-192.653,-2859.11,-120.866,-2735.86,-2781.02,-200.396,-2815.37,-2743.6,-2867.76 0|0:821:762,0,55,0:762:29793:0,55,0:0,2211,0:0,-229.385,-2678.75,-47.1476,-2496.56,-2480.01,-229.385,-2678.75,-2496.56,-2678.75 0|0:963:948,0,11,0:948:37089:0,11,0:0,438,0:0,-285.376,-3334.78,-249.239,-3298.72,-3295.4,-285.376,-3334.78,-3298.72,-3334.78 dDocent_Contig_5929 8 . C T 37.7173 . AB=0.133333;ABP=38.0434;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=131;DPB=131;DPRA=1.48515;EPP=11.6962;EPPR=278.787;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.976378;PAO=0;PQA=0;PQR=0;PRO=0;QA=155;QR=4874;RO=127;RPL=0;RPP=11.6962;RPPR=278.787;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=127;SRP=278.787;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:540:0:0:0,-4.21442,-48.9451 0/0:23:23,0:23:883:0:0:0,-6.92369,-79.7889 0/0:23:23,0:23:887:0:0:0,-6.92369,-80.1496 0/0:14:14,0:14:514:0:0:0,-4.21442,-46.5884 0/1:30:26,4:26:1001:4:155:-5.29454,0,-81.3706 0/0:27:27,0:27:1049:0:0:0,-8.12781,-94.7166 dDocent_Contig_5930 107 . N C 50.3253 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=49;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:42:-3.9887,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5931 18 . C T 827.335 . AB=0.270073;ABP=65.9196;AC=3;AF=0.25;AN=12;AO=43;CIGAR=1X;DP=229;DPB=229;DPRA=0;EPP=96.3836;EPPR=406.904;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.581395;PAIREDR=0.725806;PAO=0;PQA=0;PQR=0;PRO=0;QA=1661;QR=7411;RO=186;RPL=0;RPP=96.3836;RPPR=406.904;RPR=43;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=186;SRP=406.904;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:28,2:28:1123:2:80:0,-1.43911,-93.7636 0/0:27:25,2:25:999:2:76:0,-0.913136,-82.9958 0/1:27:18,9:18:731:9:344:-23.1892,0,-57.9862 0/1:54:42,12:42:1670:12:474:-26.7559,0,-134.278 0/0:35:33,2:33:1317:2:81:0,-2.85032,-111.111 0/1:56:40,16:40:1571:16:606:-38.0102,0,-124.772 dDocent_Contig_5932 32 . T G 174.512 . AB=0.116667;ABP=232.752;AC=2;AF=0.166667;AN=12;AO=28;CIGAR=1X;DP=477;DPB=477;DPRA=0.708571;EPP=63.8115;EPPR=978.001;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.857143;PAIREDR=0.781737;PAO=0;PQA=0;PQR=0;PRO=0;QA=1103;QR=17900;RO=449;RPL=0;RPP=63.8115;RPPR=978.001;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=449;SRP=978.001;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:61:60,1:60:2388:1:41:0,-14.2683,-210.982 0/0:105:105,0:105:4153:0:0:0,-31.6081,-373.745 0/0:52:50,2:50:1980:2:82:0,-7.87388,-170.615 0/1:76:66,10:66:2644:10:395:-13.0247,0,-215.212 0/0:79:75,4:75:2997:4:156:0,-9.36725,-255.404 0/1:104:93,11:93:3738:11:429:-7.64828,0,-305.117 dDocent_Contig_5933 34 . A G 168.367 . AB=0.110526;ABP=253.347;AC=1;AF=0.0833333;AN=12;AO=60;CIGAR=5M1X2M;DP=1569;DPB=1565;DPRA=1.05347;EPP=133.299;EPPR=3192.9;GTI=0;LEN=1;MEANALT=3.75;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.983333;PAIREDR=0.999319;PAO=0;PQA=0;PQR=0;PRO=0;QA=2340;QR=57521;RO=1469;RPL=0;RPP=133.299;RPPR=3192.9;RPR=60;RUN=1;SAF=60;SAP=133.299;SAR=0;SRF=1469;SRP=3192.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:190:167,0,21:167:6551:0,21:0,828:-18.0585,-68.3305,-607.086,0,-538.968,-532.647 0|0:220:201,3,14:201:7828:3,14:114,547:0,-51.159,-693.586,-15.5395,-649.528,-654.663 0|0:341:317,12,11:317:12371:12,11:463,403:0,-57.3964,-1070.69,-62.5085,-1041.38,-1076.08 0|0:313:279,17,14:279:10933:17,14:635,562:0,-32.0106,-925.921,-37.6639,-884.73,-932.497 0|0:223:223,0,0:223:8754:0,0:0,0:0,-67.1297,-787.479,-67.1297,-787.479,-787.479 0|0:282:282,0,0:282:11084:0,0:0,0:0,-84.8905,-996.969,-84.8905,-996.969,-996.969 dDocent_Contig_5934 37 . G T 2216.57 . AB=0.126829;ABP=746.893;AC=5;AF=0.416667;AN=12;AO=78;CIGAR=3M1X6M;DP=615;DPB=615;DPRA=0;EPP=172.385;EPPR=350.719;GTI=0;LEN=1;MEANALT=5.66667;MQM=59.7949;MQMR=58.3811;NS=6;NUMALT=7;ODDS=0;PAIRED=0;PAIREDR=0.741259;PAO=0;PQA=0;PQR=0;PRO=0;QA=2591;QR=11015;RO=286;RPL=0;RPP=172.385;RPPR=624.051;RPR=78;RUN=1;SAF=78;SAP=172.385;SAR=0;SRF=250;SRP=350.719;SRR=36;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:70:30,0,1,3,16,4,5,11:30:1128:0,1,3,16,4,5,11:0,37,113,419,144,171,441:-27.3431,-36.374,-128.734,-35.6907,-128.049,-127.748,-27.1103,-119.475,-118.79,-118.572,-7.84792,-100.195,-99.5113,-90.9366,-95.3782,-31.0486,-123.405,-122.72,-114.146,-94.8709,-122.201,-22.4885,-114.854,-114.169,-105.595,-86.3176,-109.526,-113.349,0,-92.3867,-91.7022,-83.1264,-63.85,-87.0585,-78.5055,-89.0754 0|1:109:57,5,7,8,11,12,9,0:57:2228:5,7,8,11,12,9,0:180,258,272,295,440,289,0:-6.15381,-19.436,-201.189,-18.514,-197.893,-199.663,-1.27507,-180.676,-179.753,-182.146,-3.03901,-182.434,-181.511,-164.293,-183,-8.4826,-187.868,-186.945,-169.727,-171.486,-188.132,0,-179.402,-178.479,-161.261,-163.019,-168.453,-180.57,-23.3125,-202.694,-201.77,-184.554,-186.311,-191.744,-183.28,-206.573 0|1:80:51,0,0,7,6,10,6,0:51:1959:0,0,7,6,10,6,0:0,0,264,151,377,214,0:-6.30616,-21.6587,-182.428,-21.6587,-182.428,-182.428,0,-160.796,-160.796,-158.689,-11.5083,-172.271,-172.271,-150.64,-170.465,-5.38651,-166.138,-166.138,-144.507,-155.985,-163.128,-4.19564,-164.983,-164.983,-143.35,-154.827,-148.695,-163.177,-21.6587,-182.428,-182.428,-160.796,-172.271,-166.138,-164.983,-182.428 0|1:103:61,0,0,11,4,3,17,7:61:2337:0,0,11,4,3,17,7:0,0,365,117,111,600,266:-30.5127,-48.8755,-236.486,-48.8755,-236.486,-236.486,-19.4895,-207.105,-207.105,-203.794,-40.6387,-228.247,-228.247,-198.866,-227.042,-47.099,-234.7,-234.7,-205.32,-226.461,-233.797,0,-187.63,-187.63,-158.25,-179.391,-185.846,-182.513,-27.0525,-214.672,-214.672,-185.291,-206.433,-212.887,-165.816,-212.565 0|1:128:55,6,0,32,0,10,22,0:55:2127:6,0,32,0,10,22,0:217,0,1079,0,354,718,0:-68.8761,-80.7831,-253.554,-85.4327,-255.361,-260.015,0,-169.962,-174.613,-164.98,-85.4327,-255.361,-260.015,-174.613,-260.015,-72.7473,-242.672,-247.325,-161.927,-247.325,-244.314,-27.4522,-197.399,-202.051,-116.649,-202.051,-189.363,-195.428,-85.4327,-255.361,-260.015,-174.613,-260.015,-247.325,-202.051,-260.015 0|1:125:32,8,0,37,0,24,19,0:32:1236:8,0,37,0,24,19,0:293,0,1309,0,875,599,0:-93.6828,-97.5596,-196.561,-103.316,-198.97,-204.728,0,-95.6833,-101.437,-90.2992,-103.316,-198.97,-204.728,-101.437,-204.728,-65.7507,-161.408,-167.161,-63.8788,-167.161,-159.936,-55.1382,-150.801,-156.558,-53.2624,-156.558,-118.996,-150.838,-103.316,-198.97,-204.728,-101.437,-204.728,-167.161,-156.558,-204.728 dDocent_Contig_5935 24 . G A 25790.1 . AB=0.30043;ABP=1208.62;AC=6;AF=0.5;AN=12;AO=1047;CIGAR=1X;DP=3485;DPB=3485;DPRA=0;EPP=2276.54;EPPR=5297.06;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.993314;PAIREDR=0.996719;PAO=0;PQA=0;PQR=0;PRO=0;QA=40449;QR=93642;RO=2438;RPL=0;RPP=2276.54;RPPR=5297.06;RPR=1047;RUN=1;SAF=1047;SAP=2276.54;SAR=0;SRF=2438;SRP=5297.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:508:366,142:366:14125:142:5447:-337.249,0,-1117.58 0/1:620:400,220:400:15280:220:8462:-574.63,0,-1187.74 0/1:243:158,85:158:6120:85:3309:-224.759,0,-477.523 0/1:669:444,225:444:17061:225:8745:-585.281,0,-1333.11 0/1:605:406,199:406:15486:199:7636:-504.897,0,-1210.79 0/1:840:664,176:664:25570:176:6850:-363.414,0,-2046.73 dDocent_Contig_5937 17 . T C 37.4088 . AB=0.103093;ABP=135.739;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1M1I1M1X;DP=461;DPB=464.333;DPRA=1.33242;EPP=24.725;EPPR=978.001;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.982183;PAO=0;PQA=0;PQR=0;PRO=0;QA=379;QR=17847;RO=449;RPL=0;RPP=24.725;RPPR=978.001;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=449;SRP=978.001;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:28:27,0:27:1078:0:0:0,-8.12781,-96.9316 0|0:102:102,0:102:4034:0:0:0,-30.7051,-363.061 0|0:61:61,0:61:2404:0:0:0,-18.3628,-216.507 0|0:63:63,0:63:2512:0:0:0,-18.9649,-226.223 0|0:110:109,0:109:4379:0:0:0,-32.8123,-393.712 0|1:97:87,10:87:3440:10:379:-5.26368,0,-280.46 dDocent_Contig_5938 11 . G T 118.439 . AB=0.122449;ABP=124.347;AC=3;AF=0.25;AN=12;AO=13;CIGAR=1X;DP=204;DPB=204;DPRA=1.22881;EPP=31.2394;EPPR=417.762;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.923077;PAIREDR=0.727749;PAO=0;PQA=0;PQR=0;PRO=0;QA=524;QR=7655;RO=191;RPL=0;RPP=31.2394;RPPR=417.762;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=191;SRP=417.762;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:40:36,4:36:1433:4:163:-3.01723,0,-117.18 0/0:16:16,0:16:631:0:0:0,-4.81648,-57.1197 0/0:43:43,0:43:1733:0:0:0,-12.9443,-156.18 0/0:47:46,1:46:1839:1:40:0,-10.1527,-161.718 0/1:25:23,2:23:939:2:81:-0.159984,0,-77.2835 0/1:33:27,6:27:1080:6:240:-12.0405,0,-87.5525 dDocent_Contig_5939 37 . T G 237.942 . AB=0.145833;ABP=159.899;AC=3;AF=0.25;AN=12;AO=29;CIGAR=1X;DP=279;DPB=279;DPRA=0;EPP=65.983;EPPR=545.878;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1100;QR=9901;RO=250;RPL=0;RPP=65.983;RPPR=545.878;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=250;SRP=545.878;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:49:44,5:44:1753:5:202:-3.81161,0,-143.234 0/0:57:54,3:54:2147:3:119:0,-6.06331,-182.308 0/1:42:36,6:36:1410:6:240:-9.33189,0,-114.502 0/0:54:51,3:51:2008:3:115:0,-5.53059,-170.18 0/0:24:22,2:22:884:2:74:0,-0.199286,-72.8401 0/1:53:43,10:43:1699:10:350:-15.871,0,-137.177 dDocent_Contig_5940 24 . C T 35.1718 . AB=0.0877863;ABP=389.698;AC=1;AF=0.0833333;AN=12;AO=37;CIGAR=1X;DP=1102;DPB=1102;DPRA=1.43302;EPP=83.3548;EPPR=2313.46;GTI=0;LEN=1;MEANALT=1;MQM=58.2432;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.945946;PAIREDR=0.99906;PAO=0;PQA=0;PQR=0;PRO=0;QA=1496;QR=42674;RO=1064;RPL=0;RPP=83.3548;RPPR=2313.46;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=1064;SRP=2313.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:117:117,0:117:4703:0:0:0,-35.2205,-423.171 0/0:193:193,0:193:7752:0:0:0,-58.0988,-697.244 0/0:138:138,0:138:5513:0:0:0,-41.5421,-495.972 0/0:194:193,0:193:7719:0:0:0,-58.0988,-693.903 0/1:262:239,23:239:9594:23:929:-5.03993,0,-783.966 0/0:198:184,14:184:7393:14:567:0,-10.0376,-615.393 dDocent_Contig_5941 50 . G A 43.7153 . AB=0.1;ABP=141.985;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=433;DPB=433;DPRA=1.5015;EPP=24.725;EPPR=921.543;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990544;PAO=0;PQA=0;PQR=0;PRO=0;QA=396;QR=16698;RO=423;RPL=10;RPP=24.725;RPPR=921.543;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=423;SRP=921.543;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:52:52,0:52:2017:0:0:0,-15.6536,-181.72 0/1:100:90,10:90:3544:10:396:-5.89439,0,-288.902 0/0:51:51,0:51:2036:0:0:0,-15.3525,-183.432 0/0:121:121,0:121:4801:0:0:0,-36.4246,-431.997 0/0:28:28,0:28:1112:0:0:0,-8.42884,-100.367 0/0:81:81,0:81:3188:0:0:0,-24.3834,-286.987 dDocent_Contig_5942 8 . C T 3450.38 . AB=0.378613;ABP=47.2933;AC=5;AF=0.416667;AN=12;AO=135;CIGAR=1X;DP=401;DPB=401;DPRA=0;EPP=296.159;EPPR=576.279;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996212;PAO=0;PQA=0;PQR=0;PRO=0;QA=5227;QR=10120;RO=264;RPL=0;RPP=296.159;RPPR=576.279;RPR=135;RUN=1;SAF=135;SAP=296.159;SAR=0;SRF=264;SRP=576.279;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:25,3:25:944:3:117:-2.48154,0,-76.8399 0/1:55:47,7:47:1798:7:275:-8.47362,0,-145.428 0/1:65:59,6:59:2250:6:232:-1.68198,0,-183.154 0/0:55:51,4:51:1969:4:156:0,-2.13936,-163.031 0/1:90:35,54:35:1340:54:2084:-160.884,0,-93.9779 0/1:108:47,61:47:1819:61:2363:-180.366,0,-131.448 dDocent_Contig_5943 59 . G C 90402.3 . AB=0.675316;ABP=1227.32;AC=6;AF=0.5;AN=12;AO=3097;CIGAR=1X;DP=4586;DPB=4586;DPRA=0;EPP=6728.06;EPPR=3229.82;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999327;PAO=0;PQA=0;PQR=0;PRO=0;QA=115964;QR=54400;RO=1486;RPL=3097;RPP=6728.06;RPPR=3229.82;RPR=0;RUN=1;SAF=3097;SAP=6728.06;SAR=0;SRF=1486;SRP=3229.82;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:671:230,440:230:8171:440:15946:-1232.91,0,-533.534 0/1:675:287,388:287:10154:388:14030:-1059.18,0,-710.533 0/1:602:269,333:269:10037:333:12749:-965.64,0,-721.807 0/1:747:267,478:267:9731:478:18063:-1400.26,0,-651.031 0/1:899:147,752:147:5615:752:28435:-2286.91,0,-234.705 0/1:992:286,706:286:10692:706:26741:-2106.55,0,-663.313 dDocent_Contig_5944 78 . G A 197.436 . AB=0.191176;ABP=59.3408;AC=1;AF=0.0833333;AN=12;AO=34;CIGAR=1X;DP=524;DPB=524;DPRA=0.727434;EPP=76.8404;EPPR=1067.03;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1178;QR=17150;RO=490;RPL=34;RPP=76.8404;RPPR=1067.03;RPR=0;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=490;SRP=1067.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:85:77,8:77:2703:8:280:0,-0.0481622,-217.978 0/0:113:113,0:113:3871:0:0:0,-34.0164,-348.606 0/0:73:67,6:67:2366:6:215:0,-2.27602,-193.5 0/0:101:96,5:96:3362:5:151:0,-16.5184,-288.912 0/1:68:55,13:55:1944:13:460:-21.2658,0,-154.768 0/0:84:82,2:82:2904:2:72:0,-18.4498,-254.761 dDocent_Contig_5945 174 . C G 46.6214 . AB=0.142857;ABP=49.5419;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=133;DPB=133;DPRA=0.923077;EPP=16.0391;EPPR=278.787;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.834646;PAO=0;PQA=0;PQR=0;PRO=0;QA=220;QR=4654;RO=127;RPL=6;RPP=16.0391;RPPR=278.787;RPR=0;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=278.787;SRR=127;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:609:0:0:0,-5.11751,-55.139 0/1:29:25,4:25:912:4:148:-4.9521,0,-73.6701 0/1:13:11,2:11:405:2:72:-2.92325,0,-32.8838 0/0:32:32,0:32:1182:0:0:0,-9.63296,-106.687 0/0:17:17,0:17:623:0:0:0,-5.11751,-56.4049 0/0:25:25,0:25:923:0:0:0,-7.52575,-83.3909 dDocent_Contig_5946 68 . C T 359.581 . AB=0.12523;ABP=665.445;AC=1;AF=0.0833333;AN=12;AO=94;CIGAR=1X;DP=2105;DPB=2105;DPRA=1.77653;EPP=207.129;EPPR=4358.98;GTI=0;LEN=1;MEANALT=1.8;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3110;QR=69918;RO=2006;RPL=94;RPP=207.129;RPPR=4358.98;RPR=0;RUN=1;SAF=94;SAP=207.129;SAR=0;SRF=2006;SRP=4358.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:333:330,2:330:11417:2:70:0,-93.4578,-1020.89 0/0:530:516,14:516:17994:14:468:0,-117.107,-1576.68 0/0:295:288,6:288:10253:6:210:0,-69.3703,-903.426 0/1:543:473,68:473:16293:68:2224:-37.481,0,-1303.16 0/0:213:213,0:213:7411:0:0:0,-64.1194,-667.052 0/0:191:186,4:186:6550:4:138:0,-44.5603,-576.887 dDocent_Contig_5947 32 . T G 1074.15 . AB=0.151386;ABP=498.092;AC=4;AF=0.333333;AN=12;AO=85;CIGAR=1X;DP=701;DPB=701;DPRA=0;EPP=187.585;EPPR=1340.64;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99513;PAO=0;PQA=0;PQR=0;PRO=0;QA=3383;QR=24686;RO=616;RPL=0;RPP=187.585;RPPR=1340.64;RPR=85;RUN=1;SAF=85;SAP=187.585;SAR=0;SRF=616;SRP=1340.64;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:109:84,25:84:3363:25:971:-54.8715,0,-269.904 0/1:134:114,20:114:4557:20:813:-33.1455,0,-369.72 0/1:55:49,6:49:1967:6:239:-5.32778,0,-160.663 0/0:110:101,9:101:4056:9:360:0,-0.351108,-332.247 0/0:122:117,5:117:4678:5:195:0,-18.8042,-403.011 0/1:171:151,20:151:6065:20:805:-21.2913,0,-494.124 dDocent_Contig_5948 98 . N G 151.33 . AB=0;ABP=0;AC=8;AF=0.8;AN=10;AO=6;CIGAR=1X;DP=8;DPB=8;DPRA=1.75;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=149;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:25:-2.49986,-0.30103,0 1/1:1:0,1:0:0:1:25:-2.49986,-0.30103,0 1/1:3:0,2:0:0:2:42:-3.87205,-0.60206,0 0/0:1:0,0:0:0:0:0:0,0,0 1/1:2:0,2:0:0:2:57:-5.41422,-0.60206,0 dDocent_Contig_5949 52 . T C 197.638 . AB=0.141509;ABP=121.335;AC=1;AF=0.0833333;AN=12;AO=28;CIGAR=1X;DP=773;DPB=773;DPRA=0.908642;EPP=63.8115;EPPR=1618.59;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.928571;PAIREDR=0.818548;PAO=0;PQA=0;PQR=0;PRO=0;QA=1104;QR=28893;RO=744;RPL=28;RPP=63.8115;RPPR=1618.59;RPR=0;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=744;SRP=1618.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:106:91,15:91:3592:15:584:-20.9857,0,-291.409 0/0:114:114,0:114:4295:0:0:0,-34.3174,-386.527 0/0:114:109,5:109:4264:5:198:0,-16.1204,-365.535 0/0:148:140,8:140:5479:8:322:0,-15.2041,-463.614 0/0:139:138,0:138:5370:0:0:0,-41.5421,-483.126 0/0:152:152,0:152:5893:0:0:0,-45.7566,-530.194 dDocent_Contig_5950 22 . T C 6358.87 . AB=0.144346;ABP=3481.42;AC=6;AF=0.5;AN=12;AO=457;CIGAR=1X;DP=3166;DPB=3166;DPRA=0;EPP=995.373;EPPR=5885.53;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=1;PAIREDR=0.990033;PAO=0;PQA=0;PQR=0;PRO=0;QA=17771;QR=103321;RO=2709;RPL=0;RPP=995.373;RPPR=5885.53;RPR=457;RUN=1;SAF=457;SAP=995.373;SAR=0;SRF=2709;SRP=5885.53;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:410:358,52:358:13589:52:2017:-58.3253,0,-1098.94 0/1:538:474,64:474:17987:64:2508:-63.9394,0,-1455.9 0/1:443:388,55:388:14777:55:2174:-62.4881,0,-1195.81 0/1:524:468,56:468:17911:56:2162:-37.039,0,-1453.24 0/1:473:401,72:401:15438:72:2773:-107.343,0,-1246.16 0/1:778:620,158:620:23619:158:6137:-317.974,0,-1890.02 dDocent_Contig_5951 98 . N T 684.415 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=24;CIGAR=10X1M1X;DP=24;DPB=29.9167;DPRA=0;EPP=55.1256;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=53.25;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0.0833333;PAIREDR=0;PAO=51;PQA=1299;PQR=0;PRO=0;QA=755;QR=0;RO=0;RPL=24;RPP=55.1256;RPPR=0;RPR=0;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:3:0,3:0:0:3:83:-7.47772,-0.90309,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:66:-5.94494,-0.60206,0 1|1:12:0,12:0:0:12:385:-34.6238,-3.61236,0 1|1:7:0,7:0:0:7:221:-19.7925,-2.10721,0 dDocent_Contig_5952 15 . G T 328.943 . AB=0.241935;ABP=38.8746;AC=1;AF=0.0833333;AN=12;AO=36;CIGAR=1X;DP=450;DPB=450;DPRA=1.10435;EPP=81.1833;EPPR=902;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.951691;PAO=0;PQA=0;PQR=0;PRO=0;QA=1366;QR=16139;RO=414;RPL=0;RPP=81.1833;RPPR=902;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=414;SRP=902;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:62:58,4:58:2247:4:160:0,-3.87985,-187.616 0/0:117:109,8:109:4255:8:283:0,-9.41292,-357.116 0/1:62:47,15:47:1839:15:586:-34.4172,0,-147.067 0/0:77:71,6:71:2782:6:221:0,-2.93578,-230.261 0/0:69:69,0:69:2652:0:0:0,-20.7711,-238.826 0/0:63:60,3:60:2364:3:116:0,-8.14735,-202.106 dDocent_Contig_5954 7 . A T 156.424 . AB=0.0517241;ABP=104.246;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=2M1X2M3X2M6I4M2D1M1X4M;DP=253;DPB=256.909;DPRA=1.14851;EPP=9.52472;EPPR=356.96;GTI=0;LEN=1;MEANALT=13;MQM=40;MQMR=59.9632;NS=6;NUMALT=6;ODDS=0;PAIRED=1;PAIREDR=0.993865;PAO=0;PQA=0;PQR=0;PRO=0;QA=109;QR=6339;RO=163;RPL=0;RPP=9.52472;RPPR=356.96;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=163;SRP=356.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:38:23,0,0,0,2,0,2:23:885:0,0,0,2,0,2:0,0,0,75,0,77:0,-6.92369,-79.5952,-6.92369,-79.5952,-79.5952,-6.92369,-79.5952,-79.5952,-79.5952,-1.13574,-73.8078,-73.8078,-73.8078,-73.2057,-6.92369,-79.5952,-79.5952,-79.5952,-73.8078,-79.5952,-1.01493,-73.6876,-73.6876,-73.6876,-67.9003,-73.6876,-73.0856 0|0:58:35,0,0,0,0,3,6:35:1373:0,0,0,0,3,6:0,0,0,0,109,231:-7.19261,-17.7287,-130.662,-17.7287,-130.662,-130.662,-17.7287,-130.662,-130.662,-130.662,-17.7287,-130.662,-130.662,-130.662,-130.662,-9.29966,-122.234,-122.234,-122.234,-122.234,-121.331,0,-112.939,-112.939,-112.939,-112.939,-104.511,-111.133 0|0:25:15,5,0,0,0,0,0:15:577:5,0,0,0,0,0:185,0,0,0,0,0:-9.82582,0,-45.8742,-14.3413,-47.3793,-61.7246,-14.3413,-47.3793,-61.7246,-61.7246,-14.3413,-47.3793,-61.7246,-61.7246,-61.7246,-14.3413,-47.3793,-61.7246,-61.7246,-61.7246,-61.7246,-14.3413,-47.3793,-61.7246,-61.7246,-61.7246,-61.7246,-61.7246 0|0:63:51,0,0,0,0,0,1:51:1987:0,0,0,0,0,1:0,0,0,0,0,39:0,-15.3525,-178.68,-15.3525,-178.68,-178.68,-15.3525,-178.68,-178.68,-178.68,-15.3525,-178.68,-178.68,-178.68,-178.68,-15.3525,-178.68,-178.68,-178.68,-178.68,-178.68,-12.3721,-175.7,-175.7,-175.7,-175.7,-175.7,-175.399 0|0:21:8,0,2,0,0,0,1:8:308:0,2,0,0,0,1:0,76,0,0,0,37:-3.44536,-5.8536,-31.1554,0,-25.3047,-24.7027,-5.8536,-31.1554,-25.3047,-31.1554,-5.8536,-31.1554,-25.3047,-31.1554,-31.1554,-5.8536,-31.1554,-25.3047,-31.1554,-31.1554,-31.1554,-2.98257,-28.2855,-22.4349,-28.2855,-28.2855,-28.2855,-27.9845 0|1:48:31,0,0,4,0,0,1:31:1209:0,0,4,0,0,1:0,0,152,0,0,35:-2.36783,-11.6998,-111.094,-11.6998,-111.094,-111.094,0,-99.3943,-99.3943,-98.1902,-11.6998,-111.094,-111.094,-99.3943,-111.094,-11.6998,-111.094,-111.094,-99.3943,-111.094,-111.094,-8.95976,-108.353,-108.353,-96.6538,-108.353,-108.353,-108.052 dDocent_Contig_5955 9 . C T 114.688 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=3;CIGAR=6M3I1X1M2X2M1X1M1X1M1X3M2I4M;DP=252;DPB=254.75;DPRA=1.26761;EPP=9.52472;EPPR=330.903;GTI=0;LEN=1;MEANALT=13;MQM=40;MQMR=60;NS=6;NUMALT=7;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=114;QR=5841;RO=151;RPL=0;RPP=9.52472;RPPR=330.903;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=151;SRP=330.903;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:38:24,2,1,3,0,0,0,0:24:926:2,1,3,0,0,0,0:80,39,101,0,0,0,0:-0.600601,-1.76553,-77.2338,-4.84356,-74.8556,-80.6105,0,-70.0082,-73.0839,-75.1609,-7.82532,-77.8358,-80.9116,-76.064,-83.8919,-7.82532,-77.8358,-80.9116,-76.064,-83.8919,-83.8919,-7.82532,-77.8358,-80.9116,-76.064,-83.8919,-83.8919,-83.8919,-7.82532,-77.8358,-80.9116,-76.064,-83.8919,-83.8919,-83.8919,-83.8919 0|0:59:32,0,1,0,0,0,0,0:32:1248:0,1,0,0,0,0,0:0,39,0,0,0,0,0:0,-9.63296,-112.235,-6.65233,-109.255,-108.954,-9.63296,-112.235,-109.255,-112.235,-9.63296,-112.235,-109.255,-112.235,-112.235,-9.63296,-112.235,-109.255,-112.235,-112.235,-112.235,-9.63296,-112.235,-109.255,-112.235,-112.235,-112.235,-112.235,-9.63296,-112.235,-109.255,-112.235,-112.235,-112.235,-112.235,-112.235 0|0:22:12,0,0,0,0,0,0,0:12:461:0,0,0,0,0,0,0:0,0,0,0,0,0,0:0,-3.61236,-41.4802,-3.61236,-41.4802,-41.4802,-3.61236,-41.4802,-41.4802,-41.4802,-3.61236,-41.4802,-41.4802,-41.4802,-41.4802,-3.61236,-41.4802,-41.4802,-41.4802,-41.4802,-41.4802,-3.61236,-41.4802,-41.4802,-41.4802,-41.4802,-41.4802,-41.4802,-3.61236,-41.4802,-41.4802,-41.4802,-41.4802,-41.4802,-41.4802,-41.4802 0|0:61:35,0,1,0,0,3,0,2:35:1347:0,1,0,0,3,0,2:0,38,0,0,116,0,79:0,-10.536,-121.138,-7.60845,-118.21,-117.909,-10.536,-121.138,-118.21,-121.138,-10.536,-121.138,-118.21,-121.138,-121.138,-1.65748,-112.26,-109.332,-112.26,-112.26,-111.356,-10.536,-121.138,-118.21,-121.138,-121.138,-112.26,-121.138,-4.52721,-115.129,-112.202,-115.129,-115.129,-106.251,-115.129,-114.527 0|0:12:6,0,5,0,0,0,0,0:6:235:0,5,0,0,0,0,0:0,193,0,0,0,0,0:-12.9888,-14.795,-34.1343,0,-19.3524,-17.8472,-14.795,-34.1343,-19.3524,-34.1343,-14.795,-34.1343,-19.3524,-34.1343,-34.1343,-14.795,-34.1343,-19.3524,-34.1343,-34.1343,-34.1343,-14.795,-34.1343,-19.3524,-34.1343,-34.1343,-34.1343,-34.1343,-14.795,-34.1343,-19.3524,-34.1343,-34.1343,-34.1343,-34.1343,-34.1343 0|0:60:42,0,2,0,2,0,3,0:42:1624:0,2,0,2,0,3,0:0,27,0,65,0,114,0:0,-12.6433,-146.083,-11.0735,-144.497,-143.895,-12.6433,-146.083,-144.497,-146.083,-7.60615,-141.047,-139.461,-141.047,-140.445,-12.6433,-146.083,-144.497,-146.083,-141.047,-146.083,-3.8517,-137.3,-135.714,-137.3,-132.264,-137.3,-136.397,-12.6433,-146.083,-144.497,-146.083,-141.047,-146.083,-137.3,-146.083 dDocent_Contig_5956 10 . G A 1361.62 . AB=0.110661;ABP=1954.28;AC=3;AF=0.25;AN=12;AO=246;CIGAR=1X;DP=3302;DPB=3302;DPRA=0;EPP=537.193;EPPR=6639.03;GTI=0;LEN=1;MEANALT=1;MQM=59.626;MQMR=59.9755;NS=6;NUMALT=1;ODDS=0;PAIRED=0.979675;PAIREDR=0.995746;PAO=0;PQA=0;PQR=0;PRO=0;QA=9761;QR=120524;RO=3056;RPL=0;RPP=537.193;RPPR=6639.03;RPR=246;RUN=1;SAF=246;SAP=537.193;SAR=0;SRF=3056;SRP=6639.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:398:362,36:362:14307:36:1440:-9.78852,0,-1166.79 0/1:610:551,59:551:21687:59:2371:-29.727,0,-1766.4 0/0:433:402,31:402:15892:31:1213:0,-20.9063,-1319.62 0/0:579:554,25:554:21835:25:988:0,-85.3616,-1874.43 0/1:474:405,69:405:16014:69:2716:-101.869,0,-1297.27 0/0:808:782,26:782:30789:26:1033:0,-149.97,-2675.15 dDocent_Contig_5957 30 . T A 87.1762 . AB=0.106557;ABP=167.045;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=532;DPB=532;DPRA=1.28326;EPP=46.4397;EPPR=1114.8;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992188;PAO=0;PQA=0;PQR=0;PRO=0;QA=796;QR=20527;RO=512;RPL=0;RPP=46.4397;RPPR=1114.8;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=512;SRP=1114.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:89:89,0:89:3547:0:0:0,-26.7917,-319.259 0/0:115:111,4:111:4478:4:156:0,-20.2043,-388.521 0/0:62:59,3:59:2396:3:122:0,-7.29137,-204.404 0/1:122:109,13:109:4352:13:518:-10.2405,0,-354.89 0/0:51:51,0:51:2047:0:0:0,-15.3525,-184.415 0/0:93:93,0:93:3707:0:0:0,-27.9958,-333.635 dDocent_Contig_5958 8 . C T 131.822 . AB=0.131579;ABP=137.413;AC=3;AF=0.25;AN=12;AO=16;CIGAR=1X;DP=248;DPB=248;DPRA=0.692308;EPP=37.7539;EPPR=489.57;GTI=0;LEN=1;MEANALT=1;MQM=55;MQMR=59.3966;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.982759;PAO=0;PQA=0;PQR=0;PRO=0;QA=610;QR=8918;RO=232;RPL=0;RPP=37.7539;RPPR=506.792;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=230;SRP=489.57;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:29,1:29:1096:1:37:0,-5.33773,-95.2491 0/1:50:42,8:42:1609:8:308:-12.9807,0,-130.026 0/1:39:35,4:35:1354:4:148:-1.92106,0,-110.404 0/1:25:22,3:22:851:3:117:-3.36409,0,-66.3024 0/0:59:59,0:59:2274:0:0:0,-17.7608,-204.875 0/0:45:45,0:45:1734:0:0:0,-13.5463,-153.939 dDocent_Contig_5959 40 . G A 5797.1 . AB=0.0694981;ABP=419.941;AC=0;AF=0;AN=12;AO=18;CIGAR=1X3M1X;DP=365;DPB=407.2;DPRA=0;EPP=42.0968;EPPR=276.616;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=707;QR=4917;RO=126;RPL=0;RPP=42.0968;RPPR=276.616;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=126;SRP=276.616;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:22:7,0,9,6:7:279:0,9,6:0,348,242:-26.4635,-28.5707,-51.5479,0,-22.973,-20.2637,-8.6156,-31.5963,-3.02229,-29.7901 0|0:57:22,4,30,1:22:866:4,30,1:156,1177,38:-90.1747,-83.9749,-154.01,0,-58.4212,-62.2125,-93.6811,-152.098,-68.1274,-164.62 0|0:23:6,2,15,0:6:232:2,15,0:77,592,0:-46.9108,-42.3957,-60.8469,0,-12.7348,-14.5413,-48.7169,-61.4489,-19.0568,-67.7707 0|0:86:12,11,60,0:12:465:11,60,0:434,2372,0:-191.586,-159.488,-194.375,0,-2.48388,-20.134,-195.198,-197.686,-38.1958,-233.396 0|0:93:50,1,32,8:50:1937:1,32,8:40,1272,320:-89.6672,-101.424,-260.227,0,-155.804,-149.466,-78.3587,-234.168,-132.738,-235.054 0|0:84:29,0,48,4:29:1138:0,48,4:0,1883,162:-146.13,-154.86,-248.446,0,-93.5973,-79.1479,-141.5,-235.087,-80.2371,-233.883 dDocent_Contig_5960 18 . C A 7838.25 . AB=0.204437;ABP=1439.37;AC=4;AF=0.333333;AN=12;AO=406;CIGAR=1X;DP=2490;DPB=2490;DPRA=0;EPP=884.628;EPPR=4521.84;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.992611;PAIREDR=0.999519;PAO=0;PQA=0;PQR=0;PRO=0;QA=15878;QR=82132;RO=2081;RPL=0;RPP=884.628;RPPR=4521.84;RPR=406;RUN=1;SAF=406;SAP=884.628;SAR=0;SRF=2081;SRP=4521.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:298:286,12:286:11242:12:483:0,-45.8869,-967.237 0/1:335:272,63:272:10690:63:2486:-123.053,0,-860.61 0/0:299:292,7:292:11569:7:277:0,-64.7117,-1015.12 0/1:462:387,74:387:15275:74:2853:-118.019,0,-1234.72 0/1:401:256,144:256:10130:144:5660:-388.5,0,-790.332 0/1:695:588,106:588:23226:106:4119:-161.475,0,-1879.18 dDocent_Contig_5961 97 . T C 2845.59 . AB=0.146219;ABP=2174.01;AC=2;AF=0.166667;AN=12;AO=292;CIGAR=1X;DP=5037;DPB=5037;DPRA=1.31382;EPP=637.08;EPPR=10306.6;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.999789;PAO=0;PQA=0;PQR=0;PRO=0;QA=9873;QR=163335;RO=4745;RPL=292;RPP=637.08;RPPR=10306.6;RPR=0;RUN=1;SAF=292;SAP=637.08;SAR=0;SRF=4745;SRP=10306.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:597:597,0:597:20612:0:0:0,-179.715,-1854.74 0/0:937:937,0:937:32144:0:0:0,-282.065,-2892.25 0/0:636:636,0:636:21970:0:0:0,-191.455,-1976.91 0/0:870:870,0:870:29927:0:0:0,-261.896,-2692.78 0/1:928:763,165:763:26294:165:5624:-226.97,0,-2086.58 0/1:1069:942,127:942:32388:127:4249:-60.811,0,-2592.39 dDocent_Contig_5962 29 . T C 112224 . AB=0.819535;ABP=2863.11;AC=10;AF=0.833333;AN=12;AO=3412;CIGAR=1X3M;DP=4039;DPB=4039;DPRA=0;EPP=7412.07;EPPR=760.854;GTI=0;LEN=1;MEANALT=4.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.999707;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=134383;QR=13503;RO=349;RPL=0;RPP=7412.07;RPPR=760.854;RPR=3412;RUN=1;SAF=3412;SAP=7412.07;SAR=0;SRF=349;SRP=760.854;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:693:50,66,576:50:1950:66,576:2430,22563:-1878.5,-1694.88,-1835.29,-38.383,0,-25.2757 1|1:703:43,61,596:43:1661:61,596:2243,23543:-1971.17,-1800.76,-1918.8,-46.9452,0,-3.94331 0|1:429:69,40,317:69:2698:40,317:1517,12550:-1012.11,-908.517,-1118.29,0,-97.4546,-126.393 1|1:664:54,60,548:54:2074:60,548:2240,21618:-1775.47,-1608.34,-1760.51,-13.1394,0,-18.4174 0|1:736:117,8,606:117:4534:8,606:299,23950:-1935.56,-1946.3,-2316.33,0,-347.986,-190.043 1|1:814:16,25,769:16:586:25,769:943,30159:-2658.76,-2586.3,-2626.65,-183.618,-154.207,0 dDocent_Contig_5963 10 . C A 66326.9 . AB=0.598774;ABP=251.813;AC=8;AF=0.666667;AN=12;AO=1758;CIGAR=1X2M;DP=2936;DPB=2936;DPRA=0;EPP=3820.46;EPPR=1192.98;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.997156;PAIREDR=0.990876;PAO=0;PQA=0;PQR=0;PRO=0;QA=70001;QR=21884;RO=548;RPL=0;RPP=3820.46;RPPR=1192.98;RPR=1758;RUN=1;SAF=1758;SAP=3820.46;SAR=0;SRF=548;SRP=1192.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:374:47,0,327:47:1887:0,327:0,12875:-1045.29,-1059.44,-1214.92,0,-155.886,-57.449 0|1:460:102,0,358:102:4078:0,358:0,14313:-1148.58,-1179.29,-1515.18,0,-336.291,-228.522 0|1:263:50,10,203:50:2005:10,203:396,8052:-647.69,-630.153,-792.328,0,-132.601,-104.08 0|1:521:77,20,420:77:3050:20,420:786,16797:-1360.38,-1319.29,-1564.29,0,-186.759,-124.599 1|1:607:140,234,233:140:5589:234,233:9279,9325:-1029.34,-307.834,-697.694,-303.352,0,-693.514 1|1:711:132,360,217:132:5275:360,217:14283,8639:-1412.63,-276.812,-602.923,-741.07,0,-1110.23 dDocent_Contig_5964 35 . C A 641.733 . AB=0.203593;ABP=130.451;AC=3;AF=0.25;AN=12;AO=41;CIGAR=1X;DP=302;DPB=302;DPRA=1.11304;EPP=92.0407;EPPR=569.765;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.95122;PAIREDR=0.923372;PAO=0;PQA=0;PQR=0;PRO=0;QA=1597;QR=10469;RO=261;RPL=0;RPP=92.0407;RPPR=569.765;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=261;SRP=569.765;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:36,3:36:1435:3:121:0,-0.460184,-118.111 0/1:47:40,7:40:1603:7:275:-10.9677,0,-130.342 0/0:46:46,0:46:1818:0:0:0,-13.8474,-163.821 0/1:71:63,8:63:2549:8:313:-7.15807,0,-208.162 0/0:50:46,4:46:1851:4:158:0,-0.451226,-152.196 0/1:49:30,19:30:1213:19:730:-51.2689,0,-94.6904 dDocent_Contig_5965 98 . N T 149.175 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=57.6667;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=152;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:10:-0.999996,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:41:-3.89447,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:101:-9.40932,-0.90309,0 dDocent_Contig_5966 7 . A G 163.561 . AB=0.132353;ABP=242.511;AC=2;AF=0.166667;AN=12;AO=49;CIGAR=1X;DP=781;DPB=781;DPRA=0.639785;EPP=109.412;EPPR=1583.85;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9221;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.954918;PAO=0;PQA=0;PQR=0;PRO=0;QA=1578;QR=28002;RO=732;RPL=0;RPP=109.412;RPPR=1592.53;RPR=49;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=731;SRP=1583.85;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:79:68,11:68:2531:11:357:-8.65862,0,-204.204 0/1:125:109,16:109:4147:16:536:-10.9193,0,-335.679 0/0:99:92,7:92:3539:7:216:0,-10.0644,-298.894 0/0:117:105,12:105:4054:12:366:0,-1.99008,-331.709 0/0:186:186,0:186:7125:0:0:0,-55.9916,-638.959 0/0:175:172,3:172:6606:3:103:0,-43.0723,-584.83 dDocent_Contig_5967 7 . A G 544.616 . AB=0.166163;ABP=323.424;AC=5;AF=0.416667;AN=12;AO=60;CIGAR=1X;DP=428;DPB=428;DPRA=0;EPP=133.299;EPPR=791.255;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.9;PAIREDR=0.961433;PAO=0;PQA=0;PQR=0;PRO=0;QA=1969;QR=13841;RO=363;RPL=0;RPP=133.299;RPPR=791.255;RPR=60;RUN=1;SAF=60;SAP=133.299;SAR=0;SRF=363;SRP=791.255;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:44:38,6:38:1462:6:196:-4.71204,0,-118.612 0/1:59:51,8:51:1969:8:266:-6.50051,0,-159.688 0/0:97:91,5:91:3481:5:180:0,-12.4996,-296.913 0/1:83:66,16:66:2483:16:544:-24.3009,0,-198.71 0/1:64:54,10:54:2049:10:344:-12.0219,0,-165.379 0/1:81:63,15:63:2397:15:439:-16.148,0,-192.319 dDocent_Contig_5968 98 . N G 50.3502 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=53;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:53:-5.03393,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5969 98 . N T 693.971 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=21;CIGAR=1X;DP=21;DPB=21;DPRA=0;EPP=48.6112;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=744;QR=0;RO=0;RPL=21;RPP=48.6112;RPPR=0;RPR=0;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:101:-9.42353,-0.90309,0 1/1:6:0,6:0:0:6:215:-19.6992,-1.80618,0 1/1:1:0,1:0:0:1:36:-3.59827,-0.30103,0 1/1:5:0,5:0:0:5:178:-16.3687,-1.50515,0 1/1:6:0,6:0:0:6:214:-19.6078,-1.80618,0 dDocent_Contig_5970 9 . C T 1296.88 . AB=0.285714;ABP=83.9752;AC=5;AF=0.416667;AN=12;AO=58;CIGAR=1X;DP=240;DPB=240;DPRA=1.0973;EPP=128.956;EPPR=396.047;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.896552;PAIREDR=0.823204;PAO=0;PQA=0;PQR=0;PRO=0;QA=2204;QR=7012;RO=181;RPL=0;RPP=128.956;RPPR=396.047;RPR=58;RUN=1;SAF=58;SAP=128.956;SAR=0;SRF=181;SRP=396.047;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:37,0:37:1434:0:0:0,-11.1381,-129.337 0/1:37:30,7:30:1154:7:272:-13.7091,0,-93.0224 0/1:42:28,14:28:1085:14:522:-34.674,0,-85.3115 0/1:33:23,9:23:894:9:339:-20.8427,0,-70.7565 0/1:38:20,18:20:778:18:682:-50.2708,0,-58.9089 0/1:53:43,10:43:1667:10:389:-19.4136,0,-134.335 dDocent_Contig_5971 13 . G A 62.7586 . AB=0.125;ABP=61.6401;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=445;DPB=445;DPRA=0.986607;EPP=31.2394;EPPR=941.086;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.962963;PAO=0;PQA=0;PQR=0;PRO=0;QA=526;QR=17268;RO=432;RPL=0;RPP=31.2394;RPPR=941.086;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=432;SRP=941.086;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:86:84,2:84:3383:2:79:0,-18.3913,-297.013 0/0:71:71,0:71:2847:0:0:0,-21.3731,-256.324 0/1:48:42,6:42:1694:6:243:-7.79874,0,-138.225 0/0:87:82,5:82:3299:5:204:0,-7.44558,-278.211 0/0:58:58,0:58:2285:0:0:0,-17.4597,-205.815 0/0:95:95,0:95:3760:0:0:0,-28.5978,-338.415 dDocent_Contig_5972 98 . N T 104.487 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=105;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.64733,-0.60206,0 dDocent_Contig_5973 11 . A C 1374.47 . AB=0.295699;ABP=70.4427;AC=2;AF=0.166667;AN=12;AO=71;CIGAR=1X;DP=624;DPB=624;DPRA=1.21818;EPP=157.185;EPPR=1203.83;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2829;QR=22015;RO=553;RPL=0;RPP=157.185;RPPR=1203.83;RPR=71;RUN=1;SAF=71;SAP=157.185;SAR=0;SRF=553;SRP=1203.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:61:49,12:49:1941:12:473:-24.554,0,-156.539 0/0:77:74,3:74:2955:3:121:0,-11.8991,-254.768 0/0:160:150,10:150:6003:10:407:0,-11.1742,-503.064 0/1:125:82,43:82:3282:43:1706:-116.115,0,-257.817 0/0:88:88,0:88:3512:0:0:0,-26.4906,-316.116 0/0:113:110,3:110:4322:3:122:0,-22.6439,-377.588 dDocent_Contig_5974 12 . T C 93415.7 . AB=0.823362;ABP=3190.87;AC=6;AF=0.5;AN=12;AO=2890;CIGAR=1X;DP=3510;DPB=3510;DPRA=0;EPP=6278.57;EPPR=1344.98;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998382;PAO=0;PQA=0;PQR=0;PRO=0;QA=115766;QR=24624;RO=618;RPL=0;RPP=6278.57;RPPR=1344.98;RPR=2890;RUN=1;SAF=2890;SAP=6278.57;SAR=0;SRF=618;SRP=1344.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:185:27,158:27:1048:158:6298:-510.865,0,-38.9173 0/1:217:28,189:28:1133:189:7592:-617.544,0,-36.9254 0/1:303:76,227:76:3033:227:9105:-727.683,0,-181.842 0/1:369:83,286:83:3327:286:11421:-916.016,0,-188.401 0/1:1178:224,952:224:8945:952:38076:-3068.96,0,-450.254 0/1:1258:180,1078:180:7138:1078:43274:-3511.72,0,-263.383 dDocent_Contig_5975 7 . A T 2644.17 . AB=0.0727273;ABP=787.938;AC=1;AF=0.0833333;AN=12;AO=36;CIGAR=1X3M1X;DP=621;DPB=621;DPRA=0.785714;EPP=81.1833;EPPR=1025.77;GTI=0;LEN=1;MEANALT=2.6;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.993631;PAO=0;PQA=0;PQR=0;PRO=0;QA=1381;QR=18049;RO=471;RPL=0;RPP=81.1833;RPPR=1025.77;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=471;SRP=1025.77;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:58:40,1,16:40:1536:1,16:39,640:-40.7382,-49.5737,-175.354,0,-122.932,-121.322 0|0:123:83,5,34:83:3185:5,34:192,1357:-86.7786,-96.005,-355.92,0,-245.668,-251.194 0|0:68:55,4,8:55:2100:4,8:151,322:-10.0234,-14.2038,-185.301,0,-159.964,-169.931 0|0:134:91,5,38:91:3477:5,38:194,1499:-95.9315,-107.386,-391.16,0,-269.342,-273.843 0|1:112:86,21,5:86:3300:21,5:805,201:-40.1669,0,-264.533,-49.4881,-254.29,-318.855 0|0:126:116,0,9:116:4451:0,9:0,362:0,-34.9195,-400.251,-5.07543,-370.417,-367.708 dDocent_Contig_5976 22 . T C 209.199 . AB=0.105085;ABP=402.627;AC=1;AF=0.0833333;AN=12;AO=67;CIGAR=1X;DP=1338;DPB=1338;DPRA=0;EPP=148.499;EPPR=2760.78;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996063;PAO=0;PQA=0;PQR=0;PRO=0;QA=2650;QR=50352;RO=1270;RPL=0;RPP=148.499;RPPR=2760.78;RPR=67;RUN=1;SAF=67;SAP=148.499;SAR=0;SRF=1270;SRP=2760.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:156:154,2:154:6121:2:78:0,-39.5579,-543.26 0/0:296:289,7:289:11421:7:274:0,-64.0792,-1002.11 0/0:147:139,8:139:5471:8:320:0,-15.0839,-463.066 0/1:295:264,31:264:10442:31:1233:-22.4428,0,-850.326 0/0:164:153,10:153:6074:10:384:0,-14.5652,-511.518 0/0:280:271,9:271:10823:9:361:0,-51.4369,-940.477 dDocent_Contig_5977 98 . N T 2370.51 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=77;CIGAR=2X;DP=77;DPB=77;DPRA=0;EPP=170.214;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0.987013;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2612;QR=0;RO=0;RPL=77;RPP=170.214;RPPR=0;RPR=0;RUN=1;SAF=77;SAP=170.214;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:12:0,12:0:0:12:399:-36.2308,-3.61236,0 1|1:9:0,9:0:0:9:310:-28.2344,-2.70927,0 1|1:36:0,36:0:0:36:1235:-111.453,-10.8371,0 1|1:20:0,20:0:0:20:668:-60.4339,-6.0206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_5978 10 . C T 976.972 . AB=0.291971;ABP=54.5075;AC=4;AF=0.333333;AN=12;AO=42;CIGAR=1X;DP=244;DPB=244;DPRA=0.65614;EPP=94.2121;EPPR=441.648;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.738095;PAIREDR=0.787129;PAO=0;PQA=0;PQR=0;PRO=0;QA=1689;QR=8119;RO=202;RPL=0;RPP=94.2121;RPPR=441.648;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=202;SRP=441.648;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:25,8:25:1015:8:326:-19.7759,0,-81.7076 0/0:57:57,0:57:2300:0:0:0,-17.1587,-207.149 0/0:50:48,2:48:1920:2:81:0,-7.36577,-165.311 0/1:49:44,5:44:1756:5:202:-3.81103,0,-143.495 0/1:20:9,11:9:365:11:444:-34.295,0,-27.1943 0/1:35:19,16:19:763:16:636:-47.036,0,-58.456 dDocent_Contig_5979 19 . G T 690.434 . AB=0.180952;ABP=188.682;AC=3;AF=0.25;AN=12;AO=49;CIGAR=1X4M;DP=521;DPB=521;DPRA=0;EPP=109.412;EPPR=993.202;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=59.8487;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=0.979592;PAIREDR=0.929825;PAO=0;PQA=0;PQR=0;PRO=0;QA=1945;QR=17991;RO=456;RPL=0;RPP=109.412;RPPR=993.202;RPR=49;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=456;SRP=993.202;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:72:58,1,12:58:2305:1,12:40,470:-21.1852,-35.3492,-224.74,0,-186.403,-186.086 0|0:119:112,2,4:112:4447:2,4:80,150:0,-27.1155,-392.574,-21.4353,-380.895,-386.281 0|0:74:71,2,1:71:2767:2,1:81,36:0,-14.6642,-241.501,-18.4506,-239.166,-245.544 0|0:118:105,7,6:105:4112:7,6:279,243:0,-8.63628,-344.54,-11.5677,-326.609,-347.778 0|1:67:52,0,14:52:2056:0,14:0,556:-30.1012,-45.7547,-214.948,0,-169.181,-164.967 0|1:71:58,0,12:58:2304:0,12:0,490:-22.9788,-40.4386,-230.106,0,-189.673,-186.061 dDocent_Contig_5980 15 . A G 864.167 . AB=0.123288;ABP=812.851;AC=2;AF=0.166667;AN=12;AO=86;CIGAR=1X;DP=1623;DPB=1623;DPRA=1.00278;EPP=189.757;EPPR=3336.22;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3379;QR=59799;RO=1535;RPL=0;RPP=189.757;RPPR=3336.22;RPR=86;RUN=1;SAF=86;SAP=189.757;SAR=0;SRF=1535;SRP=3336.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:215:215,0:215:8457:0:0:0,-64.7214,-760.74 0/0:262:258,4:258:9993:4:152:0,-64.8225,-884.796 0/0:164:163,1:163:6366:1:38:0,-45.5716,-568.944 0/0:325:324,0:324:12630:0:0:0,-97.5337,-1135.82 0/1:256:225,31:225:8715:31:1218:-32.8298,0,-706.904 0/1:401:350,50:350:13638:50:1971:-56.8088,0,-1105.78 dDocent_Contig_5981 13 . A G 62.7374 . AB=0.115385;ABP=103.232;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=249;DPB=249;DPRA=1.27857;EPP=31.2394;EPPR=515.478;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.957627;PAO=0;PQA=0;PQR=0;PRO=0;QA=517;QR=9383;RO=236;RPL=0;RPP=31.2394;RPPR=515.478;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=236;SRP=515.478;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:45:40,5:40:1613:5:202:-5.01514,0,-131.855 0/1:33:29,4:29:1172:4:156:-4.48013,0,-95.8233 0/0:41:39,2:39:1517:2:77:0,-5.03403,-129.472 0/0:60:58,2:58:2300:2:82:0,-10.2821,-199.392 0/0:20:20,0:20:795:0:0:0,-6.0206,-71.866 0/0:50:50,0:50:1986:0:0:0,-15.0515,-178.931 dDocent_Contig_5982 21 . T C 299.253 . AB=0.285714;ABP=19.7617;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=255;DPB=255;DPRA=0.833333;EPP=31.2394;EPPR=528.507;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.909091;PAO=0;PQA=0;PQR=0;PRO=0;QA=527;QR=9611;RO=242;RPL=0;RPP=31.2394;RPPR=528.507;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=242;SRP=528.507;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:1049:0:0:0,-7.82678,-94.7019 0/0:66:66,0:66:2607:0:0:0,-19.868,-234.762 0/0:43:43,0:43:1721:0:0:0,-12.9443,-155.109 0/0:45:45,0:45:1802:0:0:0,-13.5463,-162.394 0/0:33:32,1:32:1266:1:41:0,-5.83942,-110.11 0/1:42:30,12:30:1166:12:486:-31.4482,0,-92.5805 dDocent_Contig_5983 12 . A G 3070.09 . AB=0.261506;ABP=239.165;AC=2;AF=0.166667;AN=12;AO=125;CIGAR=1X;DP=1124;DPB=1124;DPRA=1.47988;EPP=274.444;EPPR=2167.97;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.985958;PAO=0;PQA=0;PQR=0;PRO=0;QA=5043;QR=39512;RO=997;RPL=0;RPP=274.444;RPPR=2167.97;RPR=125;RUN=1;SAF=125;SAP=274.444;SAR=0;SRF=997;SRP=2167.97;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:140:140,0:140:5523:0:0:0,-42.1442,-496.916 0/0:178:178,0:178:7027:0:0:0,-53.5833,-632.136 0/0:103:103,0:103:4067:0:0:0,-31.0061,-366.009 0/0:225:223,0:223:8836:0:0:0,-67.1297,-794.33 0/1:219:146,73:146:5802:73:2942:-198.937,0,-456.06 0/1:259:207,52:207:8257:52:2101:-111.294,0,-664.713 dDocent_Contig_5984 93 . G A 3602.34 . AB=0.418994;ABP=23.4149;AC=4;AF=0.333333;AN=12;AO=152;CIGAR=1X;DP=411;DPB=411;DPRA=11.5429;EPP=333.074;EPPR=565.422;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5338;QR=9091;RO=259;RPL=152;RPP=333.074;RPPR=565.422;RPR=0;RUN=1;SAF=152;SAP=333.074;SAR=0;SRF=259;SRP=565.422;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:87:55,32:55:1901:32:1147:-77.3506,0,-145.176 0/1:136:71,65:71:2458:65:2272:-163.802,0,-180.532 0/1:26:17,9:17:591:9:325:-21.7693,0,-45.6843 0/1:109:65,44:65:2326:44:1523:-104.534,0,-176.778 0/0:7:7,0:7:254:0:0:0,-2.10721,-23.2106 0/0:46:44,2:44:1561:2:71:0,-7.10548,-134.034 dDocent_Contig_5986 41 . A T 166.54 . AB=0.0989305;ABP=525.557;AC=1;AF=0.0833333;AN=12;AO=119;CIGAR=2X;DP=2949;DPB=2949;DPRA=0.824798;EPP=261.416;EPPR=6044.05;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.995327;PAO=0;PQA=0;PQR=0;PRO=0;QA=4678;QR=109189;RO=2782;RPL=0;RPP=261.416;RPPR=6044.05;RPR=119;RUN=1;SAF=119;SAP=261.416;SAR=0;SRF=2782;SRP=6044.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:374:336,37,1:336:13112:37,1:1448,41:-17.8758,0,-1066.59,-115.637,-1074.35,-1193.09 0|0:556:507,34,13:507:19928:34,13:1356,526:0,-40.9515,-1669.73,-109.25,-1636.6,-1744.36 0|0:324:283,21,19:283:11082:21,19:820,734:0,-17.7907,-922.629,-24.9223,-868.679,-930.359 0|0:582:543,27,11:543:21275:27,11:1054,433:0,-76.8268,-1818.06,-127.84,-1790.56,-1873.89 0|0:561:561,0,0:561:22123:0,0:0,0:0,-168.878,-1989.38,-168.878,-1989.38,-1989.38 0|0:552:552,0,0:552:21669:0,0:0,0:0,-166.169,-1948.59,-166.169,-1948.59,-1948.59 dDocent_Contig_5987 106 . N C 65.5375 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=69;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5988 13 . A G 4440.08 . AB=0.305903;ABP=185.931;AC=2;AF=0.166667;AN=12;AO=171;CIGAR=1X;DP=1094;DPB=1094;DPRA=2.08972;EPP=374.332;EPPR=2007.28;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6838;QR=37025;RO=923;RPL=0;RPP=374.332;RPPR=2007.28;RPR=171;RUN=1;SAF=171;SAP=374.332;SAR=0;SRF=923;SRP=2007.28;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:121:121,0:121:4841:0:0:0,-36.4246,-435.575 0/0:114:114,0:114:4592:0:0:0,-34.3174,-413.187 0/0:171:171,0:171:6853:0:0:0,-51.4761,-616.428 0/0:129:129,0:129:5169:0:0:0,-38.8329,-465.061 0/1:179:86,93:86:3481:93:3721:-281.02,0,-259.426 0/1:380:302,78:302:12089:78:3117:-166.21,0,-972.734 dDocent_Contig_5989 1 . N G 76.8682 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_5990 10 . A G 118826 . AB=0.85384;ABP=4236.64;AC=7;AF=0.583333;AN=12;AO=3680;CIGAR=1X;DP=4264;DPB=4264;DPRA=0;EPP=7994.03;EPPR=1266.81;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.986685;PAIREDR=0.9811;PAO=0;PQA=0;PQR=0;PRO=0;QA=145883;QR=23156;RO=582;RPL=0;RPP=7994.03;RPPR=1266.81;RPR=3680;RUN=1;SAF=3680;SAP=7994.03;SAR=0;SRF=582;SRP=1266.81;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:383:101,282:101:4031:282:11183:-890.431,0,-247.475 0/1:405:64,340:64:2550:340:13439:-1086.55,0,-107.612 0/1:304:50,254:50:1983:254:10044:-811.819,0,-87.1498 1/1:371:15,356:15:586:356:14057:-1211.04,-58.6047,0 0/1:1486:199,1286:199:7915:1286:51076:-4144.58,0,-264.504 0/1:1315:153,1162:153:6091:1162:46084:-3747.4,0,-152.112 dDocent_Contig_5991 25 . A T 1899.86 . AB=0.296443;ABP=94.0662;AC=5;AF=0.416667;AN=12;AO=77;CIGAR=1X;DP=296;DPB=296;DPRA=0;EPP=170.214;EPPR=478.563;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.974026;PAIREDR=0.995434;PAO=0;PQA=0;PQR=0;PRO=0;QA=3102;QR=8675;RO=219;RPL=0;RPP=170.214;RPPR=478.563;RPR=77;RUN=1;SAF=77;SAP=170.214;SAR=0;SRF=219;SRP=478.563;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:14,7:14:551:7:283:-19.522,0,-43.6062 0/1:32:27,5:27:1070:5:203:-9.0201,0,-86.9569 0/1:113:70,43:70:2773:43:1731:-121.99,0,-215.659 0/1:38:22,16:22:865:16:642:-46.6754,0,-66.719 0/0:43:41,2:41:1620:2:82:0,-5.16461,-138.253 0/1:49:45,4:45:1796:4:161:-0.124428,0,-147.103 dDocent_Contig_5992 84 . A G 46282 . AB=0.0336503;ABP=2585.31;AC=0;AF=0;AN=12;AO=46;CIGAR=6M1X;DP=5200;DPB=5760.86;DPRA=0;EPP=102.898;EPPR=6599.94;GTI=0;LEN=1;MEANALT=4.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.998025;PAO=0;PQA=0;PQR=0;PRO=0;QA=1663;QR=112726;RO=3038;RPL=46;RPP=102.898;RPPR=6599.94;RPR=0;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=3038;SRP=6599.94;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:657:369,280,0:369:13267:280,0:9732,0:-680.097,0,-998.088,-791.177,-1082.38,-1873.49 0|0:898:603,247,18:603:21926:247,18:8612,658:-518.835,0,-1716.33,-646.586,-1736.92,-2431.87 0|0:469:220,215,28:220:8235:215,28:7513,1005:-544.839,0,-609.693,-529.108,-592.46,-1195.09 0|0:943:549,383,0:549:20599:383,0:13309,0:-916.621,0,-1572.06,-1081.89,-1687.35,-2769.21 0|0:1042:587,445,0:587:22033:445,0:15510,0:-1084.65,0,-1671.1,-1261.36,-1805.05,-3066.21 0|0:1191:710,386,0:710:26666:386,0:13611,0:-894.374,0,-2068.24,-1108.11,-2184.44,-3292.55 dDocent_Contig_5993 12 . C T 6810.06 . AB=0.568922;ABP=19.4732;AC=2;AF=0.166667;AN=12;AO=228;CIGAR=1X;DP=761;DPB=761;DPRA=1.78755;EPP=498.106;EPPR=1160.41;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8979;QR=21274;RO=533;RPL=0;RPP=498.106;RPPR=1160.41;RPR=228;RUN=1;SAF=228;SAP=498.106;SAR=0;SRF=533;SRP=1160.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:90:90,0:90:3621:0:0:0,-27.0927,-325.901 0/0:89:88,1:88:3460:1:41:0,-22.6971,-307.356 0/0:70:70,0:70:2808:0:0:0,-21.0721,-252.823 0/0:113:113,0:113:4572:0:0:0,-34.0164,-411.377 0/1:172:85,87:85:3363:87:3432:-257.163,0,-250.957 0/1:227:87,140:87:3450:140:5506:-427.064,0,-242.217 dDocent_Contig_5994 29 . T G 6193 . AB=0.195587;ABP=1352.82;AC=5;AF=0.416667;AN=12;AO=388;CIGAR=1X;DP=2399;DPB=2399;DPRA=0;EPP=845.542;EPPR=4369.84;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999005;PAO=0;PQA=0;PQR=0;PRO=0;QA=14875;QR=78570;RO=2011;RPL=0;RPP=845.542;RPPR=4369.84;RPR=388;RUN=1;SAF=388;SAP=845.542;SAR=0;SRF=2011;SRP=4369.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:271:230,41:230:8991:41:1566:-59.619,0,-727.213 0/1:312:246,66:246:9576:66:2525:-133.51,0,-767.455 0/1:280:156,124:156:6013:124:4791:-346.884,0,-456.73 0/1:390:338,52:338:13229:52:1988:-61.7345,0,-1072.44 0/1:424:379,45:379:14836:45:1713:-26.7743,0,-1206.67 0/0:722:662,60:662:25925:60:2292:0,-10.8684,-2124.81 dDocent_Contig_5995 70 . A G 266.16 . AB=0.153409;ABP=186.648;AC=2;AF=0.166667;AN=12;AO=35;CIGAR=1X;DP=532;DPB=532;DPRA=1.06471;EPP=79.0118;EPPR=1082.23;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.935614;PAO=0;PQA=0;PQR=0;PRO=0;QA=1173;QR=17756;RO=497;RPL=35;RPP=79.0118;RPPR=1082.23;RPR=0;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=497;SRP=1082.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:74:58,16:58:2025:16:515:-24.38,0,-160.243 0/0:127:120,7:120:4126:7:225:0,-17.6653,-350.964 0/0:59:58,1:58:2104:1:35:0,-14.2621,-186.118 0/0:96:96,0:96:3488:0:0:0,-28.8989,-314.117 0/0:74:74,0:74:2697:0:0:0,-22.2762,-242.957 0/1:102:91,11:91:3316:11:398:-5.45783,0,-267.938 dDocent_Contig_5996 65 . T C 543.092 . AB=0.236842;ABP=71.5831;AC=3;AF=0.25;AN=12;AO=27;CIGAR=1X;DP=215;DPB=215;DPRA=1.12871;EPP=61.6401;EPPR=411.247;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.968085;PAO=0;PQA=0;PQR=0;PRO=0;QA=1031;QR=7244;RO=188;RPL=27;RPP=61.6401;RPPR=411.247;RPR=0;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=188;SRP=411.247;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:53:42,11:42:1559:11:428:-22.9208,0,-124.627 0/1:45:35,10:35:1326:10:383:-21.2794,0,-106.078 0/1:16:10,6:10:400:6:220:-15.3309,0,-31.5419 0/0:23:23,0:23:904:0:0:0,-6.92369,-81.6655 0/0:36:36,0:36:1409:0:0:0,-10.8371,-127.069 0/0:42:42,0:42:1646:0:0:0,-12.6433,-148.377 dDocent_Contig_5997 98 . N G 883.538 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=29;CIGAR=1X;DP=29;DPB=29;DPRA=0;EPP=65.983;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=956;QR=0;RO=0;RPL=29;RPP=65.983;RPPR=0;RPR=0;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:88:-8.21187,-0.90309,0 1/1:17:0,17:0:0:17:564:-51.0764,-5.11751,0 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 1/1:3:0,3:0:0:3:99:-9.23746,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:136:-12.576,-1.20412,0 dDocent_Contig_5998 120 . C A 112.826 . AB=0.169492;ABP=58.9901;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=269;DPB=269;DPRA=1.3625;EPP=31.2394;EPPR=558.907;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.773438;PAO=0;PQA=0;PQR=0;PRO=0;QA=439;QR=8609;RO=256;RPL=0;RPP=31.2394;RPPR=558.907;RPR=13;RUN=1;SAF=0;SAP=31.2394;SAR=13;SRF=0;SRP=558.907;SRR=256;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:40,0:40:1347:0:0:0,-12.0412,-121.525 0/0:50:47,3:47:1575:3:103:0,-5.44148,-132.429 0/1:59:49,10:49:1667:10:336:-12.8055,0,-132.557 0/0:41:41,0:41:1378:0:0:0,-12.3422,-124.314 0/0:34:34,0:34:1109:0:0:0,-10.235,-100.103 0/0:45:45,0:45:1533:0:0:0,-13.5463,-138.262 dDocent_Contig_5999 104 . N T 75.9287 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=4X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=80;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:80:-7.59179,-0.60206,0 dDocent_Contig_6000 12 . C A 1677.19 . AB=0.12153;ABP=1661.48;AC=2;AF=0.166667;AN=12;AO=269;CIGAR=1X;DP=5272;DPB=5272;DPRA=0;EPP=587.136;EPPR=10864.7;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.973978;PAIREDR=0.986405;PAO=0;PQA=0;PQR=0;PRO=0;QA=10493;QR=199258;RO=5002;RPL=0;RPP=587.136;RPPR=10864.7;RPR=269;RUN=1;SAF=269;SAP=587.136;SAR=0;SRF=5002;SRP=10864.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:891:832,59:832:33059:59:2300:0,-61.0406,-2765.11 0/1:735:629,106:629:25227:106:4153:-152.517,0,-2046.9 0/1:598:542,56:542:21537:56:2203:-18.4233,0,-1756.48 0/0:643:602,40:602:24066:40:1551:0,-53.6086,-2023.99 0/0:1077:1070,7:1070:42407:7:276:0,-299.002,-3787.5 0/0:1328:1327,1:1327:52962:1:10:0,-398.768,-4760.47 dDocent_Contig_6001 148 . C A 252.245 . AB=0.131429;ABP=209.499;AC=1;AF=0.0833333;AN=12;AO=67;CIGAR=1X;DP=1513;DPB=1513;DPRA=0.763694;EPP=148.499;EPPR=3140.79;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999308;PAO=0;PQA=0;PQR=0;PRO=0;QA=2531;QR=52034;RO=1445;RPL=0;RPP=148.499;RPPR=3140.79;RPR=67;RUN=1;SAF=0;SAP=148.499;SAR=67;SRF=0;SRP=3140.79;SRR=1445;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:222:207,15:207:7501:15:580:0,-14.2859,-622.493 0/0:255:237,18:237:8624:18:651:0,-17.8543,-717.129 0/1:175:152,23:152:5530:23:879:-26.7474,0,-445.087 0/0:320:310,10:310:11109:10:385:0,-61.3232,-964.578 0/0:227:225,1:225:8106:1:36:0,-64.7844,-725.893 0/0:314:314,0:314:11164:0:0:0,-94.5234,-1004.56 dDocent_Contig_6002 1 . N G 77.8076 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6003 175 . C T 670.928 . AB=0.124248;ABP=614.961;AC=2;AF=0.166667;AN=12;AO=82;CIGAR=2M1X1M;DP=1078;DPB=1078;DPRA=2.79444;EPP=181.071;EPPR=2109.34;GTI=0;LEN=1;MEANALT=2.6;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.998969;PAO=0;PQA=0;PQR=0;PRO=0;QA=3198;QR=36934;RO=970;RPL=82;RPP=181.071;RPPR=2109.34;RPR=0;RUN=1;SAF=0;SAP=181.071;SAR=82;SRF=0;SRP=2109.34;SRR=970;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:223:187,2,34:187:7055:2,34:81,1343:-54.2039,-103.835,-681.332,0,-571.427,-567.853 0|1:276:246,0,28:246:9396:0,28:0,1094:-16.1108,-90.1641,-861.015,0,-771.088,-762.659 0|0:119:108,9,2:108:4061:9,2:331,79:0,-5.5035,-335.435,-26.0057,-331.643,-358.07 0|0:235:217,4,13:217:8289:4,13:157,478:0,-52.4287,-731.278,-26.2253,-693.415,-702.386 0|0:72:70,2,0:70:2692:2,0:78,0:0,-14.3287,-235.103,-21.0721,-235.705,-242.061 0|0:153:142,5,5:142:5441:5,5:195,204:0,-26.7591,-471.732,-25.9072,-456.405,-470.895 dDocent_Contig_6004 27 . A G 211.275 . AB=0.13913;ABP=133.091;AC=2;AF=0.166667;AN=12;AO=19;CIGAR=1X;DP=267;DPB=267;DPRA=1.05233;EPP=44.2683;EPPR=541.535;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.96371;PAO=0;PQA=0;PQR=0;PRO=0;QA=762;QR=9865;RO=248;RPL=0;RPP=44.2683;RPPR=541.535;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=248;SRP=541.535;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:31,2:31:1224:2:74:0,-2.90997,-103.413 0/0:33:32,1:32:1269:1:41:0,-5.83942,-110.379 0/1:34:27,7:27:1084:7:283:-15.6084,0,-87.6137 0/1:81:72,9:72:2879:9:364:-8.74095,0,-234.83 0/0:21:21,0:21:836:0:0:0,-6.32163,-75.5535 0/0:65:65,0:65:2573:0:0:0,-19.5669,-231.699 dDocent_Contig_6005 30 . T C 13520.7 . AB=0.20347;ABP=2424.1;AC=6;AF=0.5;AN=12;AO=645;CIGAR=1X;DP=3170;DPB=3170;DPRA=0;EPP=1403.61;EPPR=5483.81;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996434;PAO=0;PQA=0;PQR=0;PRO=0;QA=25754;QR=100957;RO=2524;RPL=0;RPP=1403.61;RPPR=5483.81;RPR=645;RUN=1;SAF=645;SAP=1403.61;SAR=0;SRF=2524;SRP=5483.81;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:345:284,60:284:11362:60:2412:-113.37,0,-917.945 0/1:393:296,97:296:11866:97:3878:-230.7,0,-948.783 0/1:661:486,175:486:19420:175:6994:-430.141,0,-1547.18 0/1:562:454,108:454:18171:108:4303:-218.036,0,-1464.71 0/1:514:414,100:414:16576:100:4004:-205.606,0,-1335.77 0/1:695:590,105:590:23562:105:4163:-165.433,0,-1909.31 dDocent_Contig_6006 9 . C T 407.213 . AB=0.152632;ABP=202.146;AC=3;AF=0.25;AN=12;AO=31;CIGAR=2X;DP=339;DPB=339;DPRA=1.85417;EPP=70.3259;EPPR=671.824;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996753;PAO=0;PQA=0;PQR=0;PRO=0;QA=1213;QR=11992;RO=308;RPL=0;RPP=70.3259;RPPR=671.824;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=308;SRP=671.824;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:11:8,3:8:312:3:118:-7.69156,0,-25.1317 0|0:38:38,0:38:1470:0:0:0,-11.4391,-132.567 0|0:34:34,0:34:1324:0:0:0,-10.235,-119.438 0|0:77:75,2:75:2920:2:79:0,-15.6817,-255.443 0|1:107:95,12:95:3745:12:474:-10.8025,0,-304.904 0|1:72:58,14:58:2221:14:542:-27.4491,0,-178.425 dDocent_Contig_6007 11 . A G 3359.27 . AB=0.0830861;ABP=511.799;AC=1;AF=0.0833333;AN=12;AO=28;CIGAR=1X1M1X;DP=442;DPB=442;DPRA=2.40714;EPP=63.8115;EPPR=634.909;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.996564;PAO=0;PQA=0;PQR=0;PRO=0;QA=1084;QR=11605;RO=291;RPL=0;RPP=63.8115;RPPR=634.909;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=291;SRP=634.909;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:48:22,5,21:22:881:5,21:195,829:-61.5879,-52.1824,-123.259,0,-56.56,-66.2655 0|0:146:108,6,30:108:4266:6,30:224,1195:-65.935,-80.1121,-429.326,0,-332.728,-342.033 0|0:70:30,0,40:30:1194:0,40:0,1601:-123.251,-132.282,-230.594,0,-98.7104,-86.6692 0|0:112:77,7,28:77:3108:7,28:277,1114:-68.5371,-68.9189,-323.025,0,-233.419,-247.788 0|0:35:34,0,1:34:1348:0,1:0,39:0,-10.235,-121.187,-6.63949,-117.981,-117.68 0|1:31:20,10,1:20:808:10,1:388,41:-25.8383,0,-63.5965,-28.4729,-63.2224,-94.7948 dDocent_Contig_6008 16 . T C 993.628 . AB=0.586207;ABP=6.75422;AC=1;AF=0.0833333;AN=12;AO=41;CIGAR=1X;DP=418;DPB=418;DPRA=2.09804;EPP=92.0407;EPPR=821.655;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994695;PAO=0;PQA=0;PQR=0;PRO=0;QA=1592;QR=14975;RO=377;RPL=0;RPP=92.0407;RPPR=821.655;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=377;SRP=821.655;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:47:47,0:47:1886:0:0:0,-14.1484,-169.943 0/0:43:43,0:43:1718:0:0:0,-12.9443,-154.838 0/0:40:40,0:40:1566:0:0:0,-12.0412,-141.165 0/0:74:74,0:74:2966:0:0:0,-22.2762,-267.031 0/0:156:149,7:149:5905:7:280:0,-21.3889,-505.679 0/1:58:24,34:24:934:34:1312:-100.886,0,-66.8956 dDocent_Contig_6009 17 . G A 1122.29 . AB=0.151951;ABP=515.429;AC=3;AF=0.25;AN=12;AO=84;CIGAR=1X;DP=1047;DPB=1047;DPRA=0.773953;EPP=185.414;EPPR=2085.45;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=59.9145;NS=6;NUMALT=1;ODDS=0;PAIRED=0.880952;PAIREDR=0.98853;PAO=0;PQA=0;PQR=0;PRO=0;QA=3324;QR=38331;RO=959;RPL=0;RPP=185.414;RPPR=2085.45;RPR=84;RUN=1;SAF=84;SAP=185.414;SAR=0;SRF=959;SRP=2085.45;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:119:104,15:104:4188:15:590:-17.6167,0,-341.052 0/1:183:156,27:156:6225:27:1064:-40.9589,0,-504.916 0/0:125:116,8:116:4669:8:318:0,-8.72452,-391.122 0/1:185:153,32:153:6123:32:1270:-58.8755,0,-495.093 0/0:215:215,0:215:8604:0:0:0,-64.7214,-773.856 0/0:220:215,2:215:8522:2:82:0,-57.9387,-758.003 dDocent_Contig_6010 107 . N G 4780.58 . AB=0.506173;ABP=3.06392;AC=12;AF=1;AN=12;AO=109;CIGAR=1X5M;DP=192;DPB=191.667;DPRA=0;EPP=239.701;EPPR=0;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=0;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3383;QR=0;RO=0;RPL=0;RPP=239.701;RPPR=0;RPR=109;RUN=1;SAF=0;SAP=239.701;SAR=109;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:30:0,27,3:0:0:27,3:906,99:-81.7248,-8.33431,-0.206503,-73.7209,0,-72.8178 1|1:54:0,19,35:0:0:19,35:605,1105:-137.918,-89.203,-83.4834,-49.0327,0,-38.4967 1|1:52:0,26,25:0:0:26,25:885,774:-134.002,-62.1886,-54.3618,-71.903,0,-64.3772 1|1:16:0,2,14:0:0:2,14:56,419:-38.2179,-33.7834,-33.1814,-4.71684,0,-0.50242 1|1:10:0,2,5:0:0:2,5:58,158:-17.4162,-12.7948,-12.1928,-4.65928,0,-3.15413 1|1:30:0,0,27:0:0:0,27:0,828:-74.7004,-74.7004,-74.7004,-8.12781,-8.12781,0 dDocent_Contig_6012 22 . T C 1499.85 . AB=0.194872;ABP=318.397;AC=3;AF=0.25;AN=12;AO=83;CIGAR=1X;DP=752;DPB=752;DPRA=0.924242;EPP=183.243;EPPR=1455.73;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3297;QR=26049;RO=669;RPL=0;RPP=183.243;RPPR=1455.73;RPR=83;RUN=1;SAF=83;SAP=183.243;SAR=0;SRF=669;SRP=1455.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:98:91,7:91:3538:7:278:0,-4.10983,-293.11 0/1:130:97,33:97:3783:33:1316:-79.5766,0,-301.394 0/1:97:75,22:75:2909:22:866:-49.05,0,-232.74 0/1:163:142,21:142:5543:21:837:-26.5798,0,-449.69 0/0:79:79,0:79:3092:0:0:0,-23.7814,-278.396 0/0:185:185,0:185:7184:0:0:0,-55.6905,-646.313 dDocent_Contig_6013 53 . T C 103737 . AB=0.865269;ABP=1551.28;AC=10;AF=0.833333;AN=12;AO=3112;CIGAR=1X;DP=3379;DPB=3379;DPRA=0;EPP=6760.63;EPPR=574.108;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999679;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=123267;QR=10407;RO=263;RPL=3112;RPP=6760.63;RPPR=574.108;RPR=0;RUN=1;SAF=3112;SAP=6760.63;SAR=0;SRF=263;SRP=574.108;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:356:34,321:34:1357:321:12718:-1036.78,0,-15.4367 1/1:469:30,438:30:1204:438:17372:-1453.49,-32.4245,0 1/1:350:21,328:21:805:328:13040:-1099.9,-32.4657,0 1/1:465:20,445:20:799:445:17692:-1518.64,-67.7516,0 1/1:759:14,745:14:566:745:29382:-2590.52,-177.2,0 0/1:980:144,835:144:5676:835:33063:-2677.62,0,-215.585 dDocent_Contig_6014 14 . G A 565.333 . AB=0.117647;ABP=629.033;AC=2;AF=0.166667;AN=12;AO=76;CIGAR=1X4M1X9M1X1M;DP=1602;DPB=1627.24;DPRA=0.650862;EPP=168.042;EPPR=3021.36;GTI=0;LEN=1;MEANALT=8.25;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.894245;PAO=0;PQA=0;PQR=0;PRO=0;QA=2805;QR=53836;RO=1390;RPL=0;RPP=168.042;RPPR=3021.36;RPR=76;RUN=1;SAF=76;SAP=168.042;SAR=0;SRF=1390;SRP=3021.36;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:143:105,23,6:105:4099:23,6:838,213:-36.8296,0,-330.05,-51.09,-319.625,-386.26 0|0:239:206,14,12:206:7907:14,12:522,445:0,-19.2505,-664.108,-25.5824,-631.914,-671.035 0|0:174:156,4,8:156:6066:4,8:156,296:0,-34.1207,-531.465,-22.7171,-508.456,-518.871 0|1:350:274,35,23:274:10604:35,23:1289,841:-22.9256,0,-860.522,-36.688,-802.343,-900.816 0|0:319:288,0,0:288:11177:0,0:0,0:0,-86.6966,-1005.06,-86.6966,-1005.06,-1005.06 0|0:377:361,0,4:361:13983:0,4:0,136:0,-108.672,-1257.37,-97.643,-1246.34,-1245.14 dDocent_Contig_6015 24 . T A 7295.2 . AB=0.143355;ABP=3810.18;AC=4;AF=0.333333;AN=12;AO=574;CIGAR=1X;DP=5941;DPB=5941;DPRA=0;EPP=1249.44;EPPR=11648.6;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999254;PAO=0;PQA=0;PQR=0;PRO=0;QA=22884;QR=213942;RO=5363;RPL=0;RPP=1249.44;RPPR=11648.6;RPR=574;RUN=1;SAF=574;SAP=1249.44;SAR=0;SRF=5363;SRP=11648.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:699:638,61:638:25420:61:2428:-8.25151,0,-2075.16 0/1:939:799,139:799:31853:139:5494:-211.643,0,-2581.19 0/1:636:506,129:506:20246:129:5158:-272.539,0,-1628.86 0/1:1172:1007,165:1007:40124:165:6638:-244.309,0,-3254.59 0/0:1172:1155,16:1155:46082:16:643:0,-294.702,-4084.8 0/0:1323:1258,64:1258:50217:64:2523:0,-171.156,-4287.49 dDocent_Contig_6016 40 . T G 36.0167 . AB=0.121212;ABP=44.1367;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=206;DPB=206;DPRA=0.953757;EPP=11.6962;EPPR=441.648;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.70297;PAO=0;PQA=0;PQR=0;PRO=0;QA=163;QR=7989;RO=202;RPL=0;RPP=11.6962;RPPR=441.648;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=202;SRP=441.648;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:36,0:36:1441:0:0:0,-10.8371,-129.94 0/0:30:30,0:30:1182:0:0:0,-9.0309,-106.659 0/0:30:30,0:30:1182:0:0:0,-9.0309,-106.653 0/1:33:29,4:29:1159:4:163:-5.12444,0,-94.6568 0/0:38:38,0:38:1481:0:0:0,-11.4391,-133.541 0/0:39:39,0:39:1544:0:0:0,-11.7402,-139.198 dDocent_Contig_6017 167 . A T 16032.9 . AB=0.270127;ABP=1126.13;AC=5;AF=0.416667;AN=12;AO=671;CIGAR=1X;DP=2623;DPB=2623;DPRA=0;EPP=1399.9;EPPR=4220.03;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.994039;PAIREDR=0.995385;PAO=0;PQA=0;PQR=0;PRO=0;QA=26463;QR=75794;RO=1950;RPL=664;RPP=1399.9;RPPR=4220.03;RPR=7;RUN=1;SAF=0;SAP=1460.07;SAR=671;SRF=0;SRP=4237.38;SRR=1950;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:347:304,42:304:11800:42:1655:-44.6127,0,-956.751 0/1:489:417,72:417:16303:72:2796:-104.552,0,-1318.93 0/0:176:166,10:166:6469:10:352:0,-20.9809,-550.002 0/1:505:434,71:434:16882:71:2827:-102.512,0,-1366.17 0/1:550:366,183:366:14218:183:7294:-490.431,0,-1113.02 0/1:556:263,293:263:10122:293:11539:-870.409,0,-743.054 dDocent_Contig_6018 85 . T C 569.661 . AB=0.151815;ABP=322.073;AC=2;AF=0.166667;AN=12;AO=64;CIGAR=1X;DP=1104;DPB=1104;DPRA=0;EPP=141.985;EPPR=2261.34;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2314;QR=37937;RO=1040;RPL=64;RPP=141.985;RPPR=2261.34;RPR=0;RUN=1;SAF=64;SAP=141.985;SAR=0;SRF=1040;SRP=2261.34;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:121:109,12:109:3988:12:443:-3.79128,0,-322.663 0/1:182:148,34:148:5422:34:1232:-56.3955,0,-433.286 0/0:155:146,9:146:5313:9:326:0,-16.9731,-448.577 0/0:178:174,4:174:6382:4:140:0,-40.6391,-561.469 0/0:184:183,1:183:6661:1:37:0,-51.6917,-595.826 0/0:284:280,4:280:10171:4:136:0,-72.9183,-902.673 dDocent_Contig_6019 22 . C T 34.6799 . AB=0.129032;ABP=40.0654;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=216;DPB=216;DPRA=1.10791;EPP=13.8677;EPPR=461.191;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.886256;PAO=0;PQA=0;PQR=0;PRO=0;QA=196;QR=8479;RO=211;RPL=0;RPP=13.8677;RPPR=461.191;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=211;SRP=461.191;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:46:45,1:45:1825:1:41:0,-9.75281,-160.357 0/0:35:35,0:35:1411:0:0:0,-10.536,-127.241 0/0:19:19,0:19:749:0:0:0,-5.71957,-67.7262 0/1:31:27,4:27:1076:4:155:-4.99072,0,-87.7933 0/0:25:25,0:25:991:0:0:0,-7.52575,-89.4881 0/0:60:60,0:60:2427:0:0:0,-18.0618,-218.568 dDocent_Contig_6020 39 . C A 1326.16 . AB=0.202454;ABP=253.702;AC=6;AF=0.5;AN=12;AO=66;CIGAR=10M1X;DP=326;DPB=319.455;DPRA=0;EPP=146.327;EPPR=537.193;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.954545;PAIREDR=0.902439;PAO=0;PQA=0;PQR=0;PRO=0;QA=2636;QR=9680;RO=246;RPL=0;RPP=146.327;RPPR=537.193;RPR=66;RUN=1;SAF=66;SAP=146.327;SAR=0;SRF=246;SRP=537.193;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:51:38,0,13:38:1504:0,13:0,519:-31.7039,-43.143,-166.922,0,-124.177,-120.263 0|1:59:45,0,13:45:1793:0,13:0,517:-29.0066,-42.553,-190.204,0,-147.64,-143.727 0|1:68:48,8,10:48:1902:8,10:316,398:-18.3395,-6.77646,-160.942,0,-130.579,-153.571 0|1:54:43,0,11:43:1678:0,11:0,445:-24.1505,-37.0947,-175.007,0,-138.314,-135.003 0|1:41:31,0,9:31:1176:0,9:0,352:-19.5884,-28.9203,-125.32,0,-96.38,-93.6707 0|1:53:41,0,10:41:1627:0,10:0,405:-21.0495,-33.3917,-167.315,0,-133.918,-130.908 dDocent_Contig_6022 24 . C T 110383 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=108;CIGAR=1X2M1X;DP=3754;DPB=3753.75;DPRA=0.813225;EPP=237.529;EPPR=335.246;GTI=0;LEN=1;MEANALT=5.6;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4169;QR=5809;RO=153;RPL=0;RPP=237.529;RPPR=335.246;RPR=108;RUN=1;SAF=108;SAP=237.529;SAR=0;SRF=153;SRP=335.246;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:505:27,8,9,458:27:1006:8,9,458:305,354,17667:-1498.01,-1481.11,-1561.04,-1477.01,-1534.33,-1556.64,-55.5331,-112.851,-108.746,0 0|0:678:21,52,11,591:21:818:52,11,591:1989,426,23050:-1998.85,-1841.98,-1893.56,-1970.18,-1874.22,-2034.1,-110.676,-14.7204,-142.917,0 0|0:480:20,9,22,428:20:753:9,22,428:357,835,16592:-1424.04,-1400.67,-1459.65,-1361.59,-1393.89,-1416.66,-67.1556,-99.4504,-60.379,0 0|0:714:19,26,55,611:19:719:26,55,611:1026,2134,23850:-2079.63,-2000.93,-2052.04,-1910.03,-1884.54,-1952.4,-124.996,-99.5048,-8.59708,0 0|0:636:33,24,11,563:33:1258:24,11,563:922,420,22000:-1864.86,-1799.11,-1895.08,-1840.34,-1867.85,-1940.22,-66.2826,-93.7928,-135.026,0 0|0:741:33,49,0,656:33:1255:49,0,656:1884,0,25415:-2172.18,-2027.46,-2115.62,-2182.12,-2130.37,-2285.03,-94.5616,-42.8123,-197.476,0 dDocent_Contig_6023 1 . N G 226.408 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=232;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:111:-10.3514,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 1/1:2:0,2:0:0:2:80:-7.59179,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_6025 13 . C T 13626.7 . AB=0.215508;ABP=2015.69;AC=5;AF=0.416667;AN=12;AO=626;CIGAR=1X;DP=3453;DPB=3453;DPRA=0;EPP=1362.35;EPPR=6133.08;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998403;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=25191;QR=112991;RO=2823;RPL=0;RPP=1362.35;RPPR=6133.08;RPR=626;RUN=1;SAF=626;SAP=1362.35;SAR=0;SRF=2823;SRP=6133.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:434:366,67:366:14628:67:2700:-112.383,0,-1184.65 0/1:565:446,119:446:17941:119:4792:-261.091,0,-1443.05 0/1:422:365,56:365:14542:56:2248:-75.3402,0,-1180.49 0/0:590:581,9:581:23261:9:366:0,-144.303,-2058.11 0/1:740:490,250:490:19612:250:10060:-681.953,0,-1540.64 0/1:702:575,125:575:23007:125:5025:-241.127,0,-1857.6 dDocent_Contig_6026 98 . N G 140.006 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=137;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:62:-5.78535,-0.90309,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_6027 107 . N G 53.1248 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=52;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:42:-3.9887,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:10:-0.999996,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6028 54 . T A 22584.8 . AB=0.342581;ABP=538.316;AC=5;AF=0.416667;AN=12;AO=867;CIGAR=1X;DP=3058;DPB=3058;DPRA=0;EPP=1885.68;EPPR=4758.53;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998174;PAO=0;PQA=0;PQR=0;PRO=0;QA=34119;QR=86509;RO=2190;RPL=867;RPP=1885.68;RPPR=4758.53;RPR=0;RUN=1;SAF=867;SAP=1885.68;SAR=0;SRF=2190;SRP=4758.53;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:439:263,176:263:10432:176:6930:-491.264,0,-806.077 0/1:587:407,180:407:16048:180:7157:-467.1,0,-1266.41 0/1:318:215,103:215:8428:103:4063:-269.915,0,-662.359 0/1:562:335,227:335:13244:227:8973:-637.9,0,-1021.84 0/1:581:415,166:415:16430:166:6407:-401.524,0,-1302.52 0/0:571:555,15:555:21927:15:589:0,-118.647,-1918.28 dDocent_Contig_6029 10 . T C 31.184 . AB=0.0879397;ABP=589.984;AC=1;AF=0.0833333;AN=12;AO=202;CIGAR=1X;DP=3272;DPB=3272;DPRA=0;EPP=441.648;EPPR=6667.26;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0.0247525;PAIREDR=0.536331;PAO=0;PQA=0;PQR=0;PRO=0;QA=8033;QR=122409;RO=3069;RPL=0;RPP=441.648;RPPR=6667.26;RPR=202;RUN=1;SAF=202;SAP=441.648;SAR=0;SRF=3069;SRP=6667.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:494:463,31:463:18441:31:1238:0,-37.0173,-1546.52 0/0:772:714,58:714:28459:58:2280:0,-27.0144,-2353.42 0/0:541:511,30:511:20428:30:1216:0,-53.1467,-1727.04 0/0:676:653,23:653:26057:23:907:0,-121.564,-2260.91 0/1:398:363,35:363:14490:35:1380:-4.64095,0,-1183.19 0/0:391:365,25:365:14534:25:1012:0,-26.3983,-1215.61 dDocent_Contig_6030 8 . C G 522.841 . AB=0.108071;ABP=978.328;AC=3;AF=0.25;AN=12;AO=97;CIGAR=1X3M1X;DP=1515;DPB=1515;DPRA=0;EPP=213.643;EPPR=2910.03;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=58.8474;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.669044;PAO=0;PQA=0;PQR=0;PRO=0;QA=3735;QR=54485;RO=1402;RPL=0;RPP=213.643;RPPR=3047.41;RPR=97;RUN=1;SAF=97;SAP=213.643;SAR=0;SRF=1386;SRP=2910.03;SRR=16;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:322:285,33:285:11053:33:1278:-19.1743,0,-885.23 0|0:358:354,1:354:13783:1:33:0,-103.916,-1230.49 0|0:218:203,13:203:7885:13:513:0,-18.8202,-651.805 0|1:322:286,30:286:11117:30:1155:-8.74845,0,-880.827 0|1:87:71,16:71:2760:16:616:-29.5832,0,-222.374 0|0:208:203,4:203:7887:4:140:0,-49.7214,-680.319 dDocent_Contig_6031 1 . N G 296.818 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=313;QR=0;RO=0;RPL=0;RPP=22.5536;RPPR=0;RPR=9;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:104:-9.70309,-0.90309,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:5:0,5:0:0:5:174:-16.002,-1.50515,0 ./.:.:.:.:.:.:.:. dDocent_Contig_6032 86 . T A 699.738 . AB=0.0909091;ABP=194.889;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=4M1X2M;DP=817;DPB=811.286;DPRA=0.698413;EPP=29.068;EPPR=1549.1;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=445;QR=26760;RO=712;RPL=12;RPP=29.068;RPPR=1549.1;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=712;SRP=1549.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:135:113,18,0,3:113:4165:18,0,3:636,0,111:-17.7533,0,-335.161,-51.7697,-340.58,-392.365,-42.6866,-331.499,-383.284,-382.381 0|0:134:113,0,0,20:113:4190:0,0,20:0,0,764:-28.9553,-62.9716,-405.807,-62.9716,-405.807,-405.807,0,-343.12,-343.12,-337.1 0|0:107:91,5,0,10:91:3442:5,0,10:184,0,376:-3.41067,-15.7673,-296.403,-30.8044,-297.908,-312.948,0,-267.105,-282.145,-279.134 0|0:120:87,17,0,15:87:3309:17,0,15:649,0,549:-27.0704,0,-266.297,-53.26,-271.414,-324.658,-8.40544,-226.562,-279.805,-275.29 0|1:132:120,0,12,0:120:4542:0,12,0:0,445,0:-0.656435,-36.78,-409.135,0,-372.727,-369.114,-36.78,-409.135,-372.727,-409.135 0|0:189:188,0,0,0:188:7112:0,0,0:0,0,0:0,-56.5936,-639.839,-56.5936,-639.839,-639.839,-56.5936,-639.839,-639.839,-639.839 dDocent_Contig_6033 46 . T A 27863.9 . AB=0.0912309;ABP=5332.35;AC=0;AF=0;AN=12;AO=335;CIGAR=1X2M2X;DP=4354;DPB=4354;DPRA=0;EPP=730.454;EPPR=2352.7;GTI=0;LEN=1;MEANALT=4.4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=4.44089e-16;PAIRED=0.997015;PAIREDR=0.990356;PAO=0;PQA=0;PQR=0;PRO=0;QA=11428;QR=93359;RO=2696;RPL=335;RPP=730.454;RPPR=2352.7;RPR=0;RUN=1;SAF=335;SAP=730.454;SAR=0;SRF=2696;SRP=5857.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:682:497,0,180:497:17179:0,180:0,6081:-343.541,-493.153,-1889.07,0,-1396.15,-1341.97 0|0:809:528,11,267:528:18285:11,267:378,9148:-583.725,-711.972,-2194.73,0,-1455.39,-1405.71 0|0:583:414,26,140:414:14383:26,140:883,4768:-262.21,-315.219,-1476.73,0,-1097.73,-1127.21 0|0:621:394,29,196:394:13696:29,196:956,6680:-423.4,-464.724,-1569.55,0,-1036.3,-1054.58 0|0:816:455,95,265:455:15709:95,265:3252,9038:-596.39,-469.38,-1717.08,0,-1012.32,-1196.52 0|0:843:408,174,258:408:14107:174,258:5959,8768:-588.344,-227.421,-1321.37,0,-662.583,-1068.66 dDocent_Contig_6034 76 . G T 998.473 . AB=0.160079;ABP=510.843;AC=5;AF=0.416667;AN=12;AO=87;CIGAR=1X;DP=581;DPB=581;DPRA=0;EPP=191.928;EPPR=1075.72;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.981781;PAO=0;PQA=0;PQR=0;PRO=0;QA=3098;QR=17663;RO=494;RPL=87;RPP=191.928;RPPR=1075.72;RPR=0;RUN=1;SAF=87;SAP=191.928;SAR=0;SRF=494;SRP=1075.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:75:69,6:69:2396:6:212:0,-3.15289,-196.474 0/1:102:79,23:79:2750:23:812:-42.6945,0,-217.04 0/1:82:72,10:72:2617:10:358:-7.87702,0,-211.08 0/1:96:82,14:82:2975:14:513:-17.6116,0,-239.071 0/1:95:75,20:75:2694:20:706:-35.2608,0,-214.092 0/1:131:117,14:117:4231:14:497:-5.62526,0,-341.512 dDocent_Contig_6035 11 . T G 2176.78 . AB=0.416216;ABP=14.2902;AC=2;AF=0.166667;AN=12;AO=77;CIGAR=1X;DP=435;DPB=435;DPRA=1.48;EPP=170.214;EPPR=780.397;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.896648;PAO=0;PQA=0;PQR=0;PRO=0;QA=3068;QR=14374;RO=358;RPL=0;RPP=170.214;RPPR=780.397;RPR=77;RUN=1;SAF=77;SAP=170.214;SAR=0;SRF=358;SRP=780.397;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:61:61,0:61:2448:0:0:0,-18.3628,-220.462 0/0:71:71,0:71:2849:0:0:0,-21.3731,-256.499 0/0:55:55,0:55:2209:0:0:0,-16.5566,-198.977 0/0:63:63,0:63:2538:0:0:0,-18.9649,-228.547 0/1:110:63,47:63:2515:47:1881:-136.374,0,-193.38 0/1:75:45,30:45:1815:30:1187:-84.5258,0,-140.977 dDocent_Contig_6036 35 . G C 746.977 . AB=0.234043;ABP=89.6382;AC=2;AF=0.166667;AN=12;AO=35;CIGAR=1X;DP=419;DPB=419;DPRA=0.965035;EPP=79.0118;EPPR=836.856;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.742857;PAIREDR=0.885417;PAO=0;PQA=0;PQR=0;PRO=0;QA=1412;QR=15185;RO=384;RPL=0;RPP=79.0118;RPPR=836.856;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=384;SRP=836.856;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:50,0:50:1985:0:0:0,-15.0515,-178.846 0/0:86:85,1:85:3328:1:41:0,-21.794,-295.496 0/0:49:48,1:48:1889:1:41:0,-10.6559,-166.119 0/0:93:93,0:93:3685:0:0:0,-27.9958,-331.679 0/1:78:53,25:53:2122:25:1002:-66.9941,0,-167.686 0/1:63:55,8:55:2176:8:328:-10.9255,0,-177.053 dDocent_Contig_6037 65 . C T 4566.8 . AB=0.274563;ABP=330.996;AC=5;AF=0.416667;AN=12;AO=204;CIGAR=1X;DP=787;DPB=787;DPRA=3.37727;EPP=445.991;EPPR=1262.46;GTI=0;LEN=1;MEANALT=1.6;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7640;QR=21462;RO=580;RPL=204;RPP=445.991;RPPR=1262.46;RPR=0;RUN=1;SAF=204;SAP=445.991;SAR=0;SRF=580;SRP=1262.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:167:148,18:148:5414:18:649:-8.66752,0,-437.245 0/1:234:177,57:177:6475:57:2112:-119.875,0,-512.272 0/1:130:84,45:84:3117:45:1688:-113.246,0,-241.757 0/1:147:97,49:97:3669:49:1854:-123.068,0,-286.29 0/0:44:44,0:44:1652:0:0:0,-13.2453,-148.927 0/1:65:30,35:30:1135:35:1337:-101.045,0,-82.868 dDocent_Contig_6038 16 . C T 1232.68 . AB=0.133047;ABP=820.556;AC=2;AF=0.166667;AN=12;AO=93;CIGAR=1X;DP=1702;DPB=1702;DPRA=1.39382;EPP=204.957;EPPR=3496.91;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3739;QR=64863;RO=1609;RPL=0;RPP=204.957;RPPR=3496.91;RPR=93;RUN=1;SAF=93;SAP=204.957;SAR=0;SRF=1609;SRP=3496.91;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:270:270,0:270:10868:0:0:0,-81.2781,-977.343 0/0:275:275,0:275:11147:0:0:0,-82.7832,-1002.39 0/0:145:145,0:145:5868:0:0:0,-43.6493,-527.877 0/0:313:313,0:313:12578:0:0:0,-94.2224,-1131.05 0/1:282:248,34:248:9995:34:1347:-36.6013,0,-813.974 0/1:417:358,59:358:14407:59:2392:-89.8882,0,-1169.94 dDocent_Contig_6039 8 . C A 655.759 . AB=0.131579;ABP=540.621;AC=3;AF=0.25;AN=12;AO=82;CIGAR=1X;DP=976;DPB=976;DPRA=0.780905;EPP=181.071;EPPR=1944.31;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994407;PAO=0;PQA=0;PQR=0;PRO=0;QA=3147;QR=32506;RO=894;RPL=0;RPP=181.071;RPPR=1944.31;RPR=82;RUN=1;SAF=82;SAP=181.071;SAR=0;SRF=894;SRP=1944.31;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:99:95,4:95:3204:4:152:0,-15.7523,-274.512 0/1:171:147,24:147:5319:24:919:-31.5498,0,-427.294 0/1:79:69,10:69:2451:10:377:-10.499,0,-197.03 0/1:206:180,26:180:6446:26:1005:-28.749,0,-518.122 0/0:222:204,18:204:7677:18:694:0,-4.03468,-627.985 0/0:199:199,0:199:7409:0:0:0,-59.905,-666.693 dDocent_Contig_6040 79 . T A 775.361 . AB=0.194215;ABP=199.555;AC=4;AF=0.333333;AN=12;AO=50;CIGAR=1X;DP=355;DPB=355;DPRA=1.53171;EPP=111.584;EPPR=665.309;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.54;PAIREDR=0.521311;PAO=0;PQA=0;PQR=0;PRO=0;QA=1850;QR=11421;RO=305;RPL=50;RPP=111.584;RPPR=665.309;RPR=0;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=305;SRP=665.309;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:39:33,6:33:1207:6:207:-7.22592,0,-97.1939 0/1:86:68,18:68:2478:18:650:-32.9407,0,-197.373 0/0:41:41,0:41:1573:0:0:0,-12.3422,-141.838 0/0:72:69,3:69:2623:3:114:0,-11.0422,-225.629 0/1:45:33,12:33:1248:12:456:-27.8418,0,-99.0634 0/1:72:61,11:61:2292:11:423:-16.7495,0,-184.817 dDocent_Contig_6041 12 . T C 4415.42 . AB=0.160948;ABP=1603.6;AC=3;AF=0.25;AN=12;AO=291;CIGAR=1X;DP=3656;DPB=3656;DPRA=0.744703;EPP=634.909;EPPR=7299.16;GTI=0;LEN=1;MEANALT=1.6;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11658;QR=132904;RO=3360;RPL=0;RPP=634.909;RPPR=7299.16;RPR=291;RUN=1;SAF=291;SAP=634.909;SAR=0;SRF=3360;SRP=7299.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:428:396,31:396:15679:31:1253:0,-15.7484,-1296.93 0/1:501:432,68:432:17135:68:2702:-92.4261,0,-1389.96 0/1:473:413,59:413:16349:59:2368:-70.9044,0,-1327.85 0/1:629:498,131:498:19616:131:5255:-283.433,0,-1574.62 0/0:774:772,0:772:30628:0:0:0,-232.395,-2753.51 0/0:851:849,2:849:33497:2:80:0,-248.585,-3004.3 dDocent_Contig_6042 13 . T C 842.061 . AB=0.226744;ABP=114.563;AC=3;AF=0.25;AN=12;AO=46;CIGAR=1X1M1X;DP=338;DPB=338;DPRA=1.33636;EPP=102.898;EPPR=611.023;GTI=0;LEN=1;MEANALT=1.6;MQM=56.6957;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.521739;PAIREDR=0.642857;PAO=0;PQA=0;PQR=0;PRO=0;QA=1824;QR=10584;RO=280;RPL=0;RPP=102.898;RPPR=611.023;RPR=46;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=280;SRP=611.023;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:51:36,12,3:36:1329:12,3:483,122:-28.9412,0,-105.039,-29.7142,-98.585,-137.472 0|1:68:47,15,6:47:1778:15,6:591,232:-34.2072,0,-141.228,-29.3018,-126.687,-173.236 0|0:66:58,5,3:58:2190:5,3:200,122:0,-1.23771,-179.189,-7.39198,-170.63,-185.957 0|1:53:41,12,0:41:1573:12,0:469,0:-26.2794,0,-125.881,-38.6217,-129.494,-167.729 0|0:44:44,0,0:44:1668:0,0:0,0:0,-13.2453,-150.377,-13.2453,-150.377,-150.377 0|0:56:54,2,0:54:2046:2,0:81,0:0,-9.17195,-176.69,-16.2556,-177.292,-183.972 dDocent_Contig_6043 57 . C T 787.971 . AB=0.106796;ABP=1524.54;AC=2;AF=0.166667;AN=12;AO=172;CIGAR=1X;DP=2967;DPB=2967;DPRA=1.32545;EPP=376.504;EPPR=6072.28;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6612;QR=106484;RO=2795;RPL=172;RPP=376.504;RPPR=6072.28;RPR=0;RUN=1;SAF=172;SAP=376.504;SAR=0;SRF=2795;SRP=6072.28;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:409:391,18:391:14775:18:657:0,-63.6711,-1269.61 0/1:500:445,55:445:17035:55:2051:-34.3079,0,-1381.75 0/1:633:567,66:567:21671:66:2646:-47.7111,0,-1758.6 0/0:502:470,32:470:17910:32:1222:0,-40.8419,-1500.68 0/0:389:389,0:389:14817:0:0:0,-117.101,-1332.83 0/0:534:533,1:533:20276:1:36:0,-157.152,-1820.11 dDocent_Contig_6044 124 . T G 63483.4 . AB=0.710099;ABP=971.118;AC=7;AF=0.583333;AN=12;AO=2210;CIGAR=2M1X1M;DP=2982;DPB=2932;DPRA=0;EPP=4801.96;EPPR=1429.67;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.22045e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=77134;QR=22510;RO=657;RPL=0;RPP=4801.96;RPPR=1429.67;RPR=2210;RUN=1;SAF=0;SAP=4801.96;SAR=2210;SRF=0;SRP=1429.67;SRR=657;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:329:135,0,192:135:4589:0,192:0,6657:-500.659,-541.298,-913.513,0,-372.433,-314.636 0|1:518:169,0,345:169:5807:0,345:0,12081:-932.23,-983.104,-1454.66,0,-471.689,-367.834 0|1:688:223,0,463:223:7641:0,463:0,16131:-1244.69,-1311.82,-1932.12,0,-620.332,-480.956 0|1:443:116,0,326:116:3988:0,326:0,11312:-884.823,-919.742,-1243.61,0,-324.099,-225.963 1|1:457:9,25,417:9:312:25,417:808,14605:-1285.84,-1223.38,-1241.22,-100.158,-60.3313,0 0|1:547:5,75,467:5:173:75,467:2416,16348:-1509.32,-1316.04,-1307.52,-180.707,0,-54.1861 dDocent_Contig_6045 107 . N C 161.825 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=5;CIGAR=1X3M1X1M1D5M;DP=5;DPB=4.58333;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=158;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 1|1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 1|1:2:0,2:0:0:2:63:-5.98377,-0.60206,0 1|1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 .:.:.:.:.:.:.:. dDocent_Contig_6046 27 . C T 14813.9 . AB=0.256062;ABP=1260.53;AC=2;AF=0.166667;AN=12;AO=623;CIGAR=1X;DP=4175;DPB=4175;DPRA=2.79334;EPP=1355.84;EPPR=7707.39;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999436;PAO=0;PQA=0;PQR=0;PRO=0;QA=24642;QR=138349;RO=3548;RPL=0;RPP=1355.84;RPPR=7707.39;RPR=623;RUN=1;SAF=623;SAP=1355.84;SAR=0;SRF=3548;SRP=7707.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:337:337,0:337:13078:0:0:0,-101.447,-1176.19 0/0:524:524,0:524:20408:0:0:0,-157.74,-1835.2 0/0:334:334,0:334:13077:0:0:0,-100.544,-1176.08 0/0:547:547,0:547:21272:0:0:0,-164.663,-1912.9 0/1:1088:709,378:709:27732:378:14936:-1015.8,0,-2166.33 0/1:1345:1097,245:1097:42782:245:9706:-468.808,0,-3442.64 dDocent_Contig_6047 13 . C A 1512.37 . AB=0.36875;ABP=26.9508;AC=4;AF=0.333333;AN=12;AO=62;CIGAR=1X;DP=227;DPB=227;DPRA=1.31333;EPP=137.642;EPPR=361.303;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.806452;PAIREDR=0.793939;PAO=0;PQA=0;PQR=0;PRO=0;QA=2400;QR=6654;RO=165;RPL=0;RPP=137.642;RPPR=361.303;RPR=62;RUN=1;SAF=62;SAP=137.642;SAR=0;SRF=165;SRP=361.303;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:40:26,14:26:1046:14:569:-39.5113,0,-82.3906 0/1:43:27,16:27:1095:16:597:-41.1016,0,-85.8894 0/1:32:12,20:12:487:20:759:-58.9908,0,-34.5476 0/1:45:36,9:36:1437:9:356:-18.8547,0,-116.024 0/0:30:30,0:30:1210:0:0:0,-9.0309,-109.171 0/0:37:34,3:34:1379:3:119:0,-0.0430954,-113.269 dDocent_Contig_6048 54 . T A 471.421 . AB=0.130564;ABP=402.516;AC=2;AF=0.166667;AN=12;AO=55;CIGAR=1X;DP=906;DPB=906;DPRA=1.00498;EPP=122.441;EPPR=1850.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.836364;PAIREDR=0.847239;PAO=0;PQA=0;PQR=0;PRO=0;QA=2113;QR=33613;RO=851;RPL=55;RPP=122.441;RPPR=1850.93;RPR=0;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=851;SRP=1850.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:114:113,1:113:4480:1:41:0,-30.2229,-399.048 0/0:154:144,10:144:5692:10:392:0,-10.7229,-476.468 0/0:93:93,0:93:3659:0:0:0,-27.9958,-329.347 0/0:208:208,0:208:8208:0:0:0,-62.6142,-738.283 0/1:152:131,21:131:5147:21:785:-25.2033,0,-417.365 0/1:185:162,23:162:6427:23:895:-25.1606,0,-522.493 dDocent_Contig_6049 52 . C A 752.386 . AB=0.107824;ABP=1403.04;AC=2;AF=0.166667;AN=12;AO=164;CIGAR=1X;DP=3487;DPB=3487;DPRA=0.829901;EPP=359.132;EPPR=7216.64;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.998495;PAO=0;PQA=0;PQR=0;PRO=0;QA=6308;QR=130296;RO=3322;RPL=164;RPP=359.132;RPPR=7216.64;RPR=0;RUN=1;SAF=164;SAP=359.132;SAR=0;SRF=3322;SRP=7216.64;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:539:518,21:518:20127:21:761:0,-93.4683,-1741.11 0/1:633:571,62:571:22393:62:2417:-27.1459,0,-1823.01 0/1:415:364,51:364:14371:51:1956:-51.3145,0,-1167.41 0/0:589:559,30:559:21912:30:1174:0,-71.3597,-1864.39 0/0:695:695,0:695:27225:0:0:0,-209.216,-2447.98 0/0:616:615,0:615:24268:0:0:0,-185.133,-2181.7 dDocent_Contig_6050 98 . N C 64.5896 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=2X;DP=2;DPB=2.5;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=68;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:68:-6.45788,-0.60206,0 dDocent_Contig_6052 82 . A T 13372.5 . AB=0.268273;ABP=1145.25;AC=2;AF=0.166667;AN=12;AO=827;CIGAR=1X;DP=5507;DPB=5507;DPRA=1.47386;EPP=1798.82;EPPR=10156.8;GTI=0;LEN=1;MEANALT=1.8;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999572;PAO=0;PQA=0;PQR=0;PRO=0;QA=29065;QR=162878;RO=4676;RPL=827;RPP=1798.82;RPPR=10156.8;RPR=0;RUN=1;SAF=827;SAP=1798.82;SAR=0;SRF=4676;SRP=10156.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:724:684,40:684:23911:40:1400:0,-91.6531,-2025.15 0/0:868:786,82:786:27214:82:2898:0,-0.235111,-2187.54 0/0:658:658,0:658:22934:0:0:0,-198.078,-2063.53 0/0:808:758,48:758:26398:48:1678:0,-91.5292,-2223.88 0/1:1193:928,264:928:32382:264:9303:-478.068,0,-2554.31 0/1:1256:862,393:862:30039:393:13786:-862.404,0,-2324.57 dDocent_Contig_6053 10 . T A 69.7686 . AB=0.111111;ABP=109.412;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=615;DPB=615;DPRA=0.985437;EPP=26.8965;EPPR=1308.07;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.886855;PAO=0;PQA=0;PQR=0;PRO=0;QA=438;QR=23857;RO=601;RPL=0;RPP=26.8965;RPPR=1308.07;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=601;SRP=1308.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:81:72,9:72:2855:9:358:-8.19871,0,-232.666 0/0:122:118,2:118:4658:2:80:0,-28.9291,-411.551 0/0:83:83,0:83:3284:0:0:0,-24.9855,-295.631 0/0:93:92,0:92:3663:0:0:0,-27.6948,-329.293 0/0:113:113,0:113:4502:0:0:0,-34.0164,-405.11 0/0:123:123,0:123:4895:0:0:0,-37.0267,-440.457 dDocent_Contig_6054 98 . N C 159.133 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=6;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=165;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:4:0,3:0:0:3:75:-6.78616,-0.90309,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:20:-1.99996,-0.30103,0 dDocent_Contig_6055 50 . T C 6535.67 . AB=0.222892;ABP=888.762;AC=5;AF=0.416667;AN=12;AO=296;CIGAR=1X;DP=1685;DPB=1685;DPRA=0.743978;EPP=645.766;EPPR=3008.33;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.996622;PAIREDR=0.988473;PAO=0;PQA=0;PQR=0;PRO=0;QA=11799;QR=54936;RO=1388;RPL=296;RPP=645.766;RPPR=3008.33;RPR=0;RUN=1;SAF=296;SAP=645.766;SAR=0;SRF=1388;SRP=3017.01;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:234:154,80:154:6082:80:3190:-216.728,0,-476.73 0/1:330:259,70:259:10258:70:2803:-152.928,0,-823.141 0/1:181:135,46:135:5324:46:1832:-110.598,0,-424.534 0/1:193:174,19:174:6877:19:770:-11.5219,0,-560.55 0/1:390:309,81:309:12212:81:3204:-171.012,0,-980.879 0/0:357:357,0:357:14183:0:0:0,-107.468,-1275.43 dDocent_Contig_6056 41 . G C 69764.6 . AB=0.768081;ABP=1798.3;AC=6;AF=0.5;AN=12;AO=2209;CIGAR=1X3M1X1M1X;DP=2876;DPB=2876;DPRA=0;EPP=4799.79;EPPR=1381.95;GTI=0;LEN=1;MEANALT=4;MQM=59.9285;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99689;PAO=0;PQA=0;PQR=0;PRO=0;QA=87285;QR=24626;RO=643;RPL=0;RPP=4799.79;RPPR=1381.95;RPR=2209;RUN=1;SAF=2209;SAP=4799.79;SAR=0;SRF=643;SRP=1399.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:434:62,368:62:2389:368:14552:-1177.66,0,-85.4802 0|1:600:71,525:71:2726:525:20775:-1688.29,0,-65.8333 0|1:269:67,201:67:2574:201:7939:-633.081,0,-150.778 0|1:478:89,388:89:3392:388:15300:-1231.98,0,-161.424 0|1:571:158,405:158:6024:405:16023:-1271.16,0,-372.306 0|1:524:196,322:196:7521:322:12696:-985.527,0,-520.378 dDocent_Contig_6057 98 . N C 549.593 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=17;CIGAR=2X;DP=17;DPB=17;DPRA=0;EPP=39.9253;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=16.3887;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=607;QR=0;RO=0;RPL=17;RPP=39.9253;RPPR=0;RPR=0;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:17:0,17:0:0:17:607:-54.9593,-5.11751,0 .:.:.:.:.:.:.:. dDocent_Contig_6058 18 . A G 987.35 . AB=0.10773;ABP=1628.25;AC=3;AF=0.25;AN=12;AO=135;CIGAR=1X;DP=3038;DPB=3038;DPRA=0.61557;EPP=296.159;EPPR=6302.45;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.998276;PAO=0;PQA=0;PQR=0;PRO=0;QA=5324;QR=114240;RO=2901;RPL=0;RPP=296.159;RPPR=6302.45;RPR=135;RUN=1;SAF=135;SAP=296.159;SAR=0;SRF=2901;SRP=6302.45;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:446:392,54:392:15487:54:2142:-58.6952,0,-1258.41 0/1:543:484,58:484:18937:58:2296:-43.2523,0,-1539.36 0/1:227:207,19:207:8210:19:766:-1.11353,0,-670.317 0/0:470:467,3:467:18421:3:112:0,-131.04,-1646.04 0/0:607:606,1:606:23911:1:8:0,-181.925,-2149.25 0/0:745:745,0:745:29274:0:0:0,-224.267,-2632.15 dDocent_Contig_6059 107 . N C 267.743 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=276;QR=0;RO=0;RPL=0;RPP=22.5536;RPPR=0;RPR=9;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:5:0,5:0:0:5:155:-14.2564,-1.50515,0 1/1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 1/1:2:0,2:0:0:2:56:-5.31942,-0.60206,0 dDocent_Contig_6060 22 . A G 40216.1 . AB=0.308435;ABP=1620.33;AC=6;AF=0.5;AN=12;AO=1565;CIGAR=1X3M;DP=5074;DPB=5074.75;DPRA=0;EPP=3401.36;EPPR=7216.64;GTI=0;LEN=1;MEANALT=5.5;MQM=59.9962;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.999361;PAIREDR=0.997592;PAO=0;PQA=0;PQR=0;PRO=0;QA=61220;QR=129929;RO=3322;RPL=0;RPP=3401.36;RPPR=7216.64;RPR=1565;RUN=1;SAF=1565;SAP=3401.36;SAR=0;SRF=3322;SRP=7216.64;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:703:365,53,283:365:14307:53,283:2041,11119:-804.578,-746.901,-1907.41,0,-1008.92,-1091.28 0|1:879:491,14,353:491:19212:14,353:548,13852:-991.276,-1094.03,-2669.35,0,-1534.49,-1473.29 0|1:539:314,25,195:314:12350:25,195:949,7592:-529.348,-546.073,-1554.38,0,-938.053,-957.15 0|1:937:633,27,270:633:24700:27,270:1024,10551:-676.772,-783.378,-2805.5,0,-1946.32,-1948.99 0|1:1096:891,20,175:891:34711:20,175:783,6806:-290.989,-494.825,-3341.51,0,-2788.34,-2800.04 0|1:920:628,0,289:628:24649:0,289:0,11300:-739.871,-928.917,-2956.04,0,-2027.12,-1940.12 dDocent_Contig_6061 107 . N G 346.397 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=13;CIGAR=1X;DP=13;DPB=13;DPRA=0;EPP=31.2394;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.846154;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=356;QR=0;RO=0;RPL=0;RPP=31.2394;RPPR=0;RPR=13;RUN=1;SAF=0;SAP=31.2394;SAR=13;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:4:0,4:0:0:4:61:-5.64148,-1.20412,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:2:0,2:0:0:2:67:-6.36304,-0.60206,0 1/1:4:0,4:0:0:4:134:-12.3913,-1.20412,0 1/1:1:0,1:0:0:1:25:-2.49986,-0.30103,0 dDocent_Contig_6062 28 . A T 276.384 . AB=0.116162;ABP=509.775;AC=3;AF=0.25;AN=12;AO=66;CIGAR=1X;DP=781;DPB=781;DPRA=1.41031;EPP=18.9344;EPPR=1516.72;GTI=0;LEN=1;MEANALT=1.2;MQM=59.9242;MQMR=59.6704;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0757576;PAIREDR=0.992987;PAO=0;PQA=0;PQR=0;PRO=0;QA=2365;QR=28195;RO=713;RPL=0;RPP=146.327;RPPR=1551.27;RPR=66;RUN=1;SAF=22;SAP=18.9344;SAR=44;SRF=709;SRP=1516.72;SRR=4;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:111:95,16:95:3772:16:562:-17.4935,0,-306.082 0/1:140:124,16:124:4916:16:613:-13.3588,0,-395.158 0/0:97:96,0:96:3791:0:0:0,-28.8989,-339.994 0/0:139:132,7:132:5244:7:244:0,-19.5452,-449.523 0/0:149:135,13:135:5295:13:453:0,-3.60885,-432.598 0/1:145:131,14:131:5177:14:493:-1.04562,0,-422.154 dDocent_Contig_6063 43 . G C 142.918 . AB=0.142857;ABP=88.3181;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=618;DPB=618;DPRA=1.022;EPP=29.068;EPPR=1316.75;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=0.993388;PAO=0;PQA=0;PQR=0;PRO=0;QA=445;QR=23345;RO=605;RPL=0;RPP=29.068;RPPR=1316.75;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=605;SRP=1316.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:77:66,11:66:2527:11:426:-15.5136,0,-204.421 0/0:122:122,0:122:4670:0:0:0,-36.7257,-420.274 0/0:55:55,0:55:2187:0:0:0,-16.5566,-197.018 0/0:127:127,0:127:4867:0:0:0,-38.2308,-437.998 0/0:105:105,0:105:4043:0:0:0,-31.6081,-363.906 0/0:132:130,1:130:5051:1:19:0,-37.75,-452.6 dDocent_Contig_6064 24 . T C 217.638 . AB=0.108911;ABP=405.55;AC=1;AF=0.0833333;AN=12;AO=75;CIGAR=1X;DP=1598;DPB=1598;DPRA=1.43897;EPP=165.871;EPPR=3307.99;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=59.9731;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.992773;PAO=0;PQA=0;PQR=0;PRO=0;QA=2949;QR=60293;RO=1522;RPL=0;RPP=165.871;RPPR=3307.99;RPR=75;RUN=1;SAF=75;SAP=165.871;SAR=0;SRF=1522;SRP=3307.99;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:195:195,0:195:7670:0:0:0,-58.7008,-689.953 0/0:267:252,15:252:10006:15:599:0,-26.1284,-844.415 0/0:231:224,7:224:8898:7:279:0,-44.0584,-774.814 0/0:263:260,3:260:10287:3:119:0,-68.0764,-914.112 0/1:303:269,33:269:10648:33:1269:-23.2866,0,-866.462 0/0:339:322,17:322:12784:17:683:0,-40.2495,-1087.85 dDocent_Contig_6065 30 . T A 976.728 . AB=0.0606061;ABP=58.3499;AC=0;AF=0;AN=12;AO=2;CIGAR=1X3M1X1M;DP=313;DPB=313;DPRA=0.767442;EPP=7.35324;EPPR=504.62;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0;PAIREDR=0.640693;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=9191;RO=231;RPL=0;RPP=7.35324;RPPR=504.62;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=231;SRP=504.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:49:44,0,2,3,0:44:1751:0,2,3,0:0,79,123,0:0,-13.2453,-157.415,-6.7503,-150.914,-150.312,-3.08417,-147.262,-140.761,-146.359,-13.2453,-157.415,-150.914,-147.262,-157.415 0|0:77:45,0,16,14,0:45:1790:0,16,14,0:0,645,550,0:-39.6324,-53.1787,-200.564,0,-147.396,-142.58,-7.94403,-155.332,-102.164,-151.118,-53.1787,-200.564,-147.396,-155.332,-200.564 0|0:33:26,2,5,0,0:26:1037:2,5,0,0:81,199,0,0:-8.5541,-9.69974,-94.4994,0,-78.7158,-83.8902,-16.3809,-95.1015,-85.3954,-101.781,-16.3809,-95.1015,-85.3954,-101.781,-101.781 0|0:68:44,0,20,4,0:44:1738:0,20,4,0:0,787,160,0:-51.4879,-64.7332,-207.748,0,-143.01,-136.99,-51.552,-194.568,-129.83,-193.364,-64.7332,-207.748,-143.01,-194.568,-207.748 0|0:37:34,0,3,0,0:34:1348:0,3,0,0:0,119,0,0:0,-10.235,-121.188,-0.0427151,-111.392,-110.489,-10.235,-121.188,-111.392,-121.188,-10.235,-121.188,-111.392,-121.188,-121.188 0|0:49:38,0,3,5,3:38:1527:0,3,5,3:0,121,202,114:-5.21962,-16.6588,-142.496,-6.68247,-132.522,-131.619,0,-125.843,-115.868,-124.337,-7.31618,-133.148,-123.174,-116.495,-132.245 dDocent_Contig_6066 76 . T C 422.627 . AB=0.19697;ABP=108.294;AC=4;AF=0.333333;AN=12;AO=28;CIGAR=1X4M;DP=189;DPB=189;DPRA=1.44348;EPP=63.8115;EPPR=341.76;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=0.785714;PAIREDR=0.884615;PAO=0;PQA=0;PQR=0;PRO=0;QA=1026;QR=5691;RO=156;RPL=11;RPP=5.80219;RPPR=4.40227;RPR=17;RUN=1;SAF=11;SAP=5.80219;SAR=17;SRF=73;SRP=4.40227;SRR=83;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:23:21,2,0:21:747:2,0:59,0:0,-1.32041,-61.9368,-6.32163,-62.5389,-67.2399 0|1:36:29,3,4:29:1053:3,4:111,152:-3.73966,-3.40464,-88.4683,0,-76.9058,-84.7716 0|1:45:41,0,4:41:1521:0,4:0,149:-0.226063,-12.5683,-137.014,0,-124.818,-123.614 0|0:34:32,0,2:32:1159:0,2:0,76:0,-9.63296,-104.231,-3.02148,-97.9977,-97.3956 0|1:22:16,0,6:16:579:0,6:0,218:-13.3468,-18.1633,-65.4234,0,-47.6228,-45.8166 0|1:29:17,0,12:17:632:0,12:0,431:-30.3955,-35.513,-87.2414,0,-52.0925,-48.4801 dDocent_Contig_6067 45 . A G 5729.78 . AB=0.218724;ABP=832.453;AC=5;AF=0.416667;AN=12;AO=276;CIGAR=1X;DP=1452;DPB=1452;DPRA=0;EPP=602.337;EPPR=2547.98;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.994;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.979592;PAO=0;PQA=0;PQR=0;PRO=0;QA=10978;QR=46322;RO=1176;RPL=0;RPP=602.337;RPPR=2547.98;RPR=276;RUN=1;SAF=276;SAP=602.337;SAR=0;SRF=1176;SRP=2556.66;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:262:191,71:191:7521:71:2829:-175.85,0,-597.692 0/1:285:208,77:208:8148:77:3098:-193.099,0,-647.159 0/1:153:116,37:116:4536:37:1468:-86.3091,0,-362.141 0/1:235:189,46:189:7524:46:1796:-91.1138,0,-606.064 0/0:245:233,12:233:9161:12:482:0,-30.0206,-780.258 0/1:272:239,33:239:9432:33:1305:-35.8282,0,-766.445 dDocent_Contig_6068 20 . A T 3129.95 . AB=0.45;ABP=8.22183;AC=4;AF=0.333333;AN=12;AO=110;CIGAR=1X;DP=504;DPB=504;DPRA=0.450323;EPP=241.872;EPPR=832.711;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.984772;PAO=0;PQA=0;PQR=0;PRO=0;QA=4429;QR=15790;RO=394;RPL=0;RPP=241.872;RPPR=858.57;RPR=110;RUN=1;SAF=110;SAP=241.872;SAR=0;SRF=391;SRP=832.711;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:65:38,27:38:1553:27:1072:-77.2036,0,-120.43 0/1:77:30,47:30:1198:47:1893:-147.386,0,-84.916 0/1:34:26,8:26:1033:8:328:-19.6553,0,-83.023 0/1:64:38,26:38:1525:26:1055:-75.9714,0,-118.223 0/0:155:155,0:155:6225:0:0:0,-46.6596,-559.992 0/0:109:107,2:107:4256:2:81:0,-25.1265,-375.294 dDocent_Contig_6069 73 . T A 3814.22 . AB=0.186644;ABP=999.181;AC=2;AF=0.166667;AN=12;AO=274;CIGAR=2X;DP=2957;DPB=2957;DPRA=0.959608;EPP=597.994;EPPR=5800.84;GTI=0;LEN=1;MEANALT=3.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0.99635;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10249;QR=85913;RO=2670;RPL=274;RPP=597.994;RPPR=5800.84;RPR=0;RUN=1;SAF=274;SAP=597.994;SAR=0;SRF=2670;SRP=5800.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:363:351,10:351:10975:10:378:0,-74.467,-953.445 0|0:461:422,37:422:13424:37:1363:0,-15.4994,-1085.14 0|0:455:443,9:443:14507:9:340:0,-105.339,-1274.57 0|0:510:509,0:509:16248:0:0:0,-153.224,-1461.78 0|1:554:390,163:390:12801:163:6068:-379.226,0,-985.163 0|1:614:555,55:555:17958:55:2100:-5.41787,0,-1432.21 dDocent_Contig_6070 30 . A T 423.685 . AB=0.0520231;ABP=304.569;AC=0;AF=0;AN=12;AO=11;CIGAR=1M6D3M12D2M2X;DP=501;DPB=461.538;DPRA=1.75472;EPP=26.8965;EPPR=943.258;GTI=0;LEN=1;MEANALT=4.33333;MQM=37.5455;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.272727;PAIREDR=0.981524;PAO=0;PQA=0;PQR=0;PRO=0;QA=418;QR=16952;RO=433;RPL=0;RPP=26.8965;RPPR=943.258;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=433;SRP=943.258;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:63:50,12,0:50:1968:12,0:458,0:-20.0675,0,-158.315,-35.119,-161.927,-197.041 0|0:106:101,1,2:101:3945:1,2:39,71:0,-27.4908,-351.641,-26.8554,-348.375,-350.664 0|0:106:95,10,0:95:3742:10,0:391,0:-1.96586,0,-305.128,-30.5637,-308.138,-338.455 0|0:102:74,15,8:74:2878:15,8:589,307:-23.5713,0,-232.035,-24.762,-215.459,-258.875 0|0:53:52,0,0:52:2026:0,0:0,0:0,-15.6536,-182.159,-15.6536,-182.159,-182.159 0|0:71:61,7,1:61:2393:7,1:271,40:-3.88857,0,-194.684,-18.9553,-193.496,-215.455 dDocent_Contig_6071 98 . N T 122.69 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=126;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:57:-5.41422,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_6072 37 . A T 3184.26 . AB=0.107143;ABP=40.5458;AC=0;AF=0;AN=12;AO=3;CIGAR=1X1M1X;DP=224;DPB=224;DPRA=0;EPP=9.52472;EPPR=244.044;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.738739;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=4434;RO=111;RPL=0;RPP=9.52472;RPPR=244.044;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=111;SRP=244.044;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:27:13,0,14:13:528:0,14:0,555:-42.1629,-46.0763,-89.6288,0,-43.9535,-39.7391 0|0:50:35,0,15:35:1378:0,15:0,592:-38.5594,-49.0954,-162.444,0,-113.742,-109.227 0|0:28:12,3,13:12:483:3,13:123,522:-39.3927,-32.8512,-71.7542,0,-29.6459,-35.8863 0|0:46:22,0,24:22:879:0,24:0,967:-73.4828,-80.1055,-152.503,0,-72.7983,-65.5736 0|0:41:9,0,32:9:366:0,32:0,1279:-103.036,-105.746,-135.937,0,-30.5959,-20.9629 0|0:32:20,0,12:20:800:0,12:0,470:-33.0141,-39.0347,-104.938,0,-66.2973,-62.685 dDocent_Contig_6073 11 . A G 13047.4 . AB=0.47508;ABP=8.09703;AC=5;AF=0.416667;AN=12;AO=481;CIGAR=1X;DP=1379;DPB=1379;DPRA=0;EPP=1047.49;EPPR=1952.99;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=19062;QR=35874;RO=898;RPL=0;RPP=1047.49;RPPR=1952.99;RPR=481;RUN=1;SAF=481;SAP=1047.49;SAR=0;SRF=898;SRP=1952.99;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:149:71,78:71:2864:78:3091:-233.412,0,-212.997 0/1:213:108,105:108:4220:105:4180:-312.048,0,-315.657 0/1:84:52,32:52:2084:32:1250:-87.4736,0,-162.458 0/1:170:56,114:56:2233:114:4498:-353.586,0,-149.959 0/0:436:403,33:403:16108:33:1310:0,-13.0829,-1330.29 0/1:327:208,119:208:8365:119:4733:-327.442,0,-653.927 dDocent_Contig_6074 10 . T C 336.162 . AB=0.183673;ABP=88.1852;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=221;DPB=221;DPRA=1.79747;EPP=46.4397;EPPR=439.476;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.85;PAIREDR=0.59204;PAO=0;PQA=0;PQR=0;PRO=0;QA=810;QR=8000;RO=201;RPL=0;RPP=46.4397;RPPR=439.476;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=201;SRP=439.476;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:42,2:42:1664:2:81:0,-5.55959,-142.298 0/0:40:40,0:40:1615:0:0:0,-12.0412,-145.579 0/0:11:11,0:11:426:0:0:0,-3.31133,-38.6848 0/1:53:41,12:41:1613:12:487:-28.2269,0,-129.446 0/0:28:28,0:28:1111:0:0:0,-8.42884,-100.278 0/1:45:39,6:39:1571:6:242:-8.61118,0,-128.08 dDocent_Contig_6075 27 . A G 4927.49 . AB=0.187313;ABP=1141;AC=4;AF=0.333333;AN=12;AO=256;CIGAR=1X;DP=2331;DPB=2331;DPRA=0.833703;EPP=558.907;EPPR=4508.82;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998554;PAO=0;PQA=0;PQR=0;PRO=0;QA=10233;QR=82557;RO=2075;RPL=0;RPP=558.907;RPPR=4508.82;RPR=256;RUN=1;SAF=256;SAP=558.907;SAR=0;SRF=2075;SRP=4508.82;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:281:217,64:217:8618:64:2548:-144.871,0,-690.558 0/1:361:285,76:285:11329:76:3027:-163.845,0,-910.163 0/1:274:221,53:221:8835:53:2127:-109.128,0,-712.142 0/1:424:366,58:366:14605:58:2329:-82.1279,0,-1185.69 0/0:451:451,0:451:17912:0:0:0,-135.765,-1610.66 0/0:540:535,5:535:21258:5:202:0,-143.994,-1892.86 dDocent_Contig_6076 59 . G C 2967.8 . AB=0.391156;ABP=33.2632;AC=4;AF=0.333333;AN=12;AO=121;CIGAR=2X;DP=490;DPB=490;DPRA=0.888889;EPP=265.758;EPPR=804.284;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.578512;PAIREDR=0.579946;PAO=0;PQA=0;PQR=0;PRO=0;QA=4570;QR=13785;RO=369;RPL=80;RPP=30.3062;RPPR=92.0407;RPR=41;RUN=1;SAF=80;SAP=30.3062;SAR=41;SRF=246;SRP=92.0407;SRR=123;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:64:43,21:43:1609:21:814:-54.3131,0,-125.8 0|1:71:39,32:39:1501:32:1199:-86.826,0,-113.977 0|1:52:33,19:33:1247:19:731:-50.4589,0,-96.8569 0|1:107:64,43:64:2404:43:1604:-112.404,0,-184.331 0|0:90:90,0:90:3274:0:0:0,-27.0927,-294.807 0|0:106:100,6:100:3750:6:222:0,-11.5735,-317.253 dDocent_Contig_6077 27 . T C 2298.97 . AB=0.0578512;ABP=208.475;AC=0;AF=0;AN=12;AO=11;CIGAR=1X3M7I8M;DP=629;DPB=636;DPRA=1.21739;EPP=26.8965;EPPR=956.287;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=1;PAIREDR=0.995444;PAO=0;PQA=0;PQR=0;PRO=0;QA=428;QR=16736;RO=439;RPL=0;RPP=26.8965;RPPR=956.287;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=439;SRP=956.287;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:121:101,0,7,0,11,0:101:3842:0,7,0,11,0:0,273,0,426,0:-4.61381,-35.0178,-350.125,-12.5629,-327.683,-325.576,-35.0178,-350.125,-327.683,-350.125,0,-315.135,-292.693,-315.135,-311.824,-35.0178,-350.125,-327.683,-350.125,-315.135,-350.125 0|0:114:108,0,0,0,1,4:108:4087:0,0,0,1,4:0,0,0,41,157:0,-32.5112,-367.526,-32.5112,-367.526,-367.526,-32.5112,-367.526,-367.526,-367.526,-29.1245,-364.142,-364.142,-364.142,-363.841,-19.6073,-354.613,-354.613,-354.613,-351.229,-353.409 0|0:70:60,0,0,4,3,2:60:2314:0,0,4,3,2:0,0,163,119,71:0,-18.0618,-208.108,-18.0618,-208.108,-208.108,-4.58357,-194.659,-194.659,-193.455,-8.25086,-198.312,-198.312,-184.863,-197.408,-12.2797,-202.325,-202.325,-188.876,-192.529,-201.723 0|0:103:89,0,4,0,3,7:89:3396:0,4,0,3,7:0,155,0,122,271:0,-26.7917,-305.387,-14.0594,-292.653,-291.448,-26.7917,-305.387,-292.653,-305.387,-16.7243,-295.323,-282.589,-295.323,-294.42,-4.53506,-283.125,-270.391,-283.125,-273.061,-281.018 0|0:112:47,27,0,0,0,37:47:1789:27,0,0,0,37:980,0,0,0,1422:-102.601,-36.7446,-175.351,-116.749,-183.479,-263.486,-116.749,-183.479,-263.486,-263.486,-116.749,-183.479,-263.486,-263.486,-263.486,0,-66.7421,-146.749,-146.749,-146.749,-135.61 0|0:109:34,46,0,0,0,28:34:1308:46,0,0,0,28:1690,0,0,0,1079:-127.904,0,-93.5425,-138.139,-107.39,-245.531,-138.139,-107.39,-245.531,-245.531,-138.139,-107.39,-245.531,-245.531,-245.531,-49.5377,-18.7943,-156.934,-156.934,-156.934,-148.505 dDocent_Contig_6078 16 . G A 103.529 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=57;CIGAR=4M1X;DP=2451;DPB=2509.8;DPRA=1.05556;EPP=126.784;EPPR=4971.34;GTI=0;LEN=1;MEANALT=3.25;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.998689;PAO=0;PQA=0;PQR=0;PRO=0;QA=2197;QR=89523;RO=2288;RPL=0;RPP=126.784;RPPR=4971.34;RPR=57;RUN=1;SAF=57;SAP=126.784;SAR=0;SRF=2288;SRP=4971.34;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:289:260,29,0:260:10196:29,0:1092,0:-11.5748,0,-830.112,-89.8425,-838.842,-928.307 0|0:414:395,18,0:395:15443:18,0:709,0:0,-60.4244,-1324.74,-118.907,-1330.16,-1388.49 0|0:353:326,25,1:326:12770:25,1:962,10:0,-19.0096,-1061.65,-97.5473,-1068.58,-1147.25 0|0:414:381,26,6:381:14883:26,6:1004,237:0,-32.2485,-1247.86,-95.1886,-1236.19,-1316.83 0|0:481:456,0,23:456:17897:0,23:0,912:0,-137.27,-1609.09,-62.1413,-1534.02,-1527.1 0|0:500:470,0,27:470:18334:0,27:0,1038:0,-141.484,-1648.44,-56.305,-1563.25,-1555.12 dDocent_Contig_6080 46 . T G 13069 . AB=0.274043;ABP=860.681;AC=5;AF=0.416667;AN=12;AO=567;CIGAR=1X;DP=2537;DPB=2537;DPRA=0;EPP=1225.56;EPPR=4254.79;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.998477;PAO=0;PQA=0;PQR=0;PRO=0;QA=22566;QR=78458;RO=1970;RPL=1;RPP=1225.56;RPPR=4254.79;RPR=566;RUN=1;SAF=567;SAP=1234.24;SAR=0;SRF=1970;SRP=4280.81;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:314:189,125:189:7477:125:5021:-357.226,0,-578.019 0/1:336:231,105:231:9288:105:4209:-277.621,0,-734.183 0/1:300:199,101:199:7907:101:3970:-266.972,0,-620.895 0/1:453:303,150:303:12088:150:6002:-403.582,0,-950.683 0/1:531:482,49:482:19176:49:1893:-10.7154,0,-1564.39 0/0:603:566,37:566:22522:37:1471:0,-48.8874,-1892.4 dDocent_Contig_6081 9 . A G 6699.34 . AB=0.408197;ABP=47.6643;AC=6;AF=0.5;AN=12;AO=249;CIGAR=1X;DP=610;DPB=610;DPRA=0;EPP=543.707;EPPR=786.912;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.995984;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9591;QR=13851;RO=361;RPL=0;RPP=543.707;RPPR=786.912;RPR=249;RUN=1;SAF=249;SAP=543.707;SAR=0;SRF=361;SRP=786.912;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:55:29,26:29:1110:26:1005:-74.2044,0,-83.6453 0/1:88:62,26:62:2393:26:1009:-64.6292,0,-189.087 0/1:67:40,27:40:1544:27:1050:-74.6378,0,-119.061 0/1:125:65,60:65:2507:60:2299:-169.494,0,-188.198 0/1:161:108,53:108:4100:53:2059:-137.073,0,-320.627 0/1:114:57,57:57:2197:57:2169:-161.117,0,-163.634 dDocent_Contig_6082 98 . N A 17455.9 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=565;CIGAR=1X;DP=565;DPB=565;DPRA=0;EPP=1229.89;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.987611;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=19371;QR=0;RO=0;RPL=565;RPP=1229.89;RPPR=0;RPR=0;RUN=1;SAF=565;SAP=1229.89;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:81:0,81:0:0:81:2794:-251.712,-24.3834,0 1/1:164:0,164:0:0:164:5636:-507.4,-49.3689,0 1/1:65:0,65:0:0:65:2239:-201.782,-19.567,0 1/1:122:0,122:0:0:122:4167:-375.236,-36.7257,0 1/1:73:0,73:0:0:73:2491:-224.45,-21.9752,0 1/1:60:0,60:0:0:60:2044:-184.234,-18.0618,0 dDocent_Contig_6083 50 . C G 670.808 . AB=0.180952;ABP=188.682;AC=4;AF=0.333333;AN=12;AO=40;CIGAR=1X;DP=332;DPB=332;DPRA=0;EPP=89.8692;EPPR=637.08;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.525;PAIREDR=0.493151;PAO=0;PQA=0;PQR=0;PRO=0;QA=1594;QR=11516;RO=292;RPL=40;RPP=89.8692;RPPR=637.08;RPR=0;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=292;SRP=637.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:35,7:35:1350:7:273:-12.2899,0,-109.114 0/1:78:68,10:68:2658:10:398:-12.6995,0,-215.871 0/1:47:33,14:33:1304:14:560:-36.5953,0,-103.475 0/1:43:36,7:36:1416:7:281:-12.7179,0,-114.747 0/0:59:58,1:58:2325:1:41:0,-13.6662,-205.315 0/0:63:62,1:62:2463:1:41:0,-14.8703,-217.714 dDocent_Contig_6084 27 . C A 5916.2 . AB=0.253807;ABP=521.573;AC=5;AF=0.416667;AN=12;AO=259;CIGAR=1X;DP=1102;DPB=1102;DPRA=0;EPP=565.422;EPPR=1833.56;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.996139;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10287;QR=33537;RO=843;RPL=0;RPP=565.422;RPPR=1833.56;RPR=259;RUN=1;SAF=259;SAP=565.422;SAR=0;SRF=843;SRP=1833.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:147:101,46:101:3998:46:1832:-120.838,0,-315.561 0/1:238:172,66:172:6823:66:2644:-166.436,0,-542.107 0/1:202:178,24:178:7153:24:964:-26.2535,0,-582.587 0/1:128:96,32:96:3867:32:1246:-73.8734,0,-309.482 0/0:117:108,9:108:4321:9:327:0,-5.45859,-359.071 0/1:270:188,82:188:7375:82:3274:-213.441,0,-582.108 dDocent_Contig_6086 10 . G C 6251.34 . AB=0.372937;ABP=87.9916;AC=6;AF=0.5;AN=12;AO=226;CIGAR=1X;DP=606;DPB=606;DPRA=0;EPP=493.763;EPPR=825.998;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.960177;PAIREDR=0.891821;PAO=0;PQA=0;PQR=0;PRO=0;QA=9081;QR=15205;RO=379;RPL=0;RPP=493.763;RPPR=825.998;RPR=226;RUN=1;SAF=226;SAP=493.763;SAR=0;SRF=379;SRP=825.998;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:87:53,34:53:2141:34:1373:-97.6328,0,-166.671 0/1:102:60,42:60:2420:42:1674:-120.182,0,-187.235 0/1:102:62,40:62:2510:40:1616:-114.957,0,-195.322 0/1:117:99,18:99:3948:18:707:-28.7324,0,-320.094 0/1:80:34,45:34:1363:45:1814:-139.446,0,-98.9024 0/1:118:71,47:71:2823:47:1897:-135.405,0,-218.659 dDocent_Contig_6087 98 . N C 130.753 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=128;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:65:-6.17329,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:28:-2.79973,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_6088 11 . T A 4181.9 . AB=0.148832;ABP=1974.97;AC=3;AF=0.25;AN=12;AO=412;CIGAR=1X;DP=3858;DPB=3858;DPRA=0;EPP=897.657;EPPR=7479.39;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998838;PAO=0;PQA=0;PQR=0;PRO=0;QA=16215;QR=130585;RO=3443;RPL=0;RPP=897.657;RPPR=7479.39;RPR=412;RUN=1;SAF=412;SAP=897.657;SAR=0;SRF=3443;SRP=7479.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:411:395,15:395:14960:15:556:0,-73.4679,-1295.29 0/0:692:641,51:641:24312:51:2020:0,-26.3183,-2004.66 0/1:413:371,42:371:13874:42:1689:-27.9043,0,-1123.73 0/0:914:841,72:841:31875:72:2780:0,-24.7006,-2616.4 0/1:624:510,113:510:19419:113:4473:-214.879,0,-1558.98 0/1:804:685,119:685:26145:119:4697:-180.628,0,-2109.4 dDocent_Contig_6089 48 . T C 281.264 . AB=0.155738;ABP=128.6;AC=2;AF=0.166667;AN=12;AO=27;CIGAR=1X;DP=294;DPB=294;DPRA=1.76;EPP=61.6401;EPPR=578.45;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1071;QR=10403;RO=265;RPL=0;RPP=61.6401;RPPR=578.45;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=265;SRP=578.45;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1159:0:0:0,-9.0309,-104.586 0/1:68:55,13:55:2158:13:516:-26.313,0,-173.942 0/0:73:69,4:69:2703:4:164:0,-6.82529,-228.258 0/0:36:34,2:34:1321:2:79:0,-3.33945,-111.657 0/1:54:46,6:46:1828:6:230:-5.03521,0,-148.713 0/0:33:31,2:31:1234:2:82:0,-2.15431,-103.558 dDocent_Contig_6090 10 . G A 489.559 . AB=0.12844;ABP=395.13;AC=1;AF=0.0833333;AN=12;AO=47;CIGAR=1X;DP=1838;DPB=1838;DPRA=0.691069;EPP=105.07;EPPR=3892.12;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1845;QR=70881;RO=1791;RPL=0;RPP=105.07;RPPR=3892.12;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=1791;SRP=3892.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:251:251,0:251:9913:0:0:0,-75.5585,-891.581 0/0:404:404,0:404:15932:0:0:0,-121.616,-1432.69 0/0:268:268,0:268:10668:0:0:0,-80.676,-959.424 0/0:443:443,0:443:17560:0:0:0,-133.356,-1579.01 0/0:145:140,5:140:5497:5:193:0,-25.9106,-476.862 0/1:327:285,42:285:11311:42:1652:-50.4787,0,-918.808 dDocent_Contig_6091 19 . A G 2342.57 . AB=0.251889;ABP=215.284;AC=3;AF=0.25;AN=12;AO=121;CIGAR=1X;DP=682;DPB=682;DPRA=0;EPP=265.758;EPPR=1219.03;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0495868;PAIREDR=0.948214;PAO=0;PQA=0;PQR=0;PRO=0;QA=4819;QR=22247;RO=560;RPL=0;RPP=265.758;RPPR=1219.03;RPR=121;RUN=1;SAF=121;SAP=265.758;SAR=0;SRF=560;SRP=1219.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:140:127,13:127:5005:13:517:-4.732,0,-408.19 0/0:154:142,12:142:5647:12:486:0,-2.26735,-463.947 0/1:173:124,48:124:4945:48:1897:-119.034,0,-393.036 0/0:99:91,8:91:3632:8:315:0,-1.08861,-298.181 0/1:84:45,39:45:1784:39:1564:-115.712,0,-135.488 0/0:32:31,1:31:1234:1:40:0,-5.63728,-107.333 dDocent_Contig_6092 8 . C A 3849.25 . AB=0.356132;ABP=79.2372;AC=4;AF=0.333333;AN=12;AO=164;CIGAR=1X;DP=666;DPB=666;DPRA=1.29663;EPP=359.132;EPPR=1084.42;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.988048;PAO=0;PQA=0;PQR=0;PRO=0;QA=6258;QR=19307;RO=502;RPL=0;RPP=359.132;RPPR=1093.09;RPR=164;RUN=1;SAF=164;SAP=359.132;SAR=0;SRF=501;SRP=1084.42;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:89:89,0:89:3436:0:0:0,-26.7917,-309.37 0/0:153:140,13:140:5374:13:495:0,-1.16145,-438.756 0/1:133:104,29:104:3985:29:1110:-60.167,0,-318.705 0/1:115:91,24:91:3521:24:912:-47.7761,0,-282.391 0/1:67:13,54:13:500:54:2052:-164.745,0,-25.1787 0/1:109:65,44:65:2491:44:1689:-119.459,0,-191.581 dDocent_Contig_6093 34 . T A 10673.2 . AB=0.285619;ABP=602.603;AC=2;AF=0.166667;AN=12;AO=439;CIGAR=1X;DP=3883;DPB=3883;DPRA=0.860929;EPP=956.287;EPPR=7479.39;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=59.9959;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.992158;PAO=0;PQA=0;PQR=0;PRO=0;QA=17289;QR=136275;RO=3443;RPL=0;RPP=956.287;RPPR=7479.39;RPR=439;RUN=1;SAF=439;SAP=956.287;SAR=0;SRF=3443;SRP=7479.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:459:458,1:458:18022:1:41:0,-134.078,-1616.46 0/0:592:585,6:585:23126:6:235:0,-156.516,-2057.95 0/0:598:595,3:595:23582:3:85:0,-172.089,-2112.47 0/0:732:732,0:732:29010:0:0:0,-220.354,-2608.32 0/1:704:546,158:546:21661:158:6226:-348.221,0,-1735.77 0/1:798:527,271:527:20874:271:10702:-722.319,0,-1636.75 dDocent_Contig_6094 1 . N G 306.328 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=322;QR=0;RO=0;RPL=0;RPP=20.3821;RPPR=0;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 1/1:4:0,4:0:0:4:160:-14.7834,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 dDocent_Contig_6095 7 . A G 337.227 . AB=0.238636;ABP=55.2243;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X;DP=260;DPB=260;DPRA=0.857143;EPP=50.7827;EPPR=517.649;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.727273;PAIREDR=0.738397;PAO=0;PQA=0;PQR=0;PRO=0;QA=733;QR=9035;RO=237;RPL=0;RPP=50.7827;RPPR=517.649;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=237;SRP=517.649;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:37,0:37:1401:0:0:0,-11.1381,-126.369 0/0:70:70,0:70:2666:0:0:0,-21.0721,-240.129 0/0:32:31,1:31:1197:1:37:0,-5.93513,-104.329 0/1:37:30,7:30:1132:7:218:-8.78311,0,-91.0424 0/0:33:33,0:33:1279:0:0:0,-9.93399,-115.399 0/1:51:36,14:36:1360:14:478:-28.1614,0,-107.509 dDocent_Contig_6096 70 . C T 63.4779 . AB=0.0909962;ABP=1519.95;AC=1;AF=0.0833333;AN=12;AO=233;CIGAR=1X;DP=5776;DPB=5776;DPRA=0.678295;EPP=508.963;EPPR=12035.1;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99982;PAO=0;PQA=0;PQR=0;PRO=0;QA=8642;QR=205243;RO=5541;RPL=233;RPP=508.963;RPPR=12035.1;RPR=0;RUN=1;SAF=233;SAP=508.963;SAR=0;SRF=5541;SRP=12035.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:713:651,62:651:23450:62:2256:0,-11.3435,-1906.44 0/0:960:908,52:908:32853:52:1887:0,-118.889,-2785.44 0/0:608:584,24:584:21905:24:921:0,-99.8199,-1887.11 0/1:1044:949,95:949:35947:95:3578:-7.87067,0,-2918.84 0/0:1084:1084,0:1084:39203:0:0:0,-326.317,-3526.69 0/0:1367:1365,0:1365:51885:0:0:0,-410.906,-4666.06 dDocent_Contig_6097 107 . N A 574.082 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=23;CIGAR=1X;DP=25;DPB=25;DPRA=0;EPP=52.9542;EPPR=0;GTI=0;LEN=1;MEANALT=1.33333;MQM=40;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=629;QR=0;RO=0;RPL=0;RPP=52.9542;RPPR=0;RPR=23;RUN=1;SAF=0;SAP=52.9542;SAR=23;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:60:-5.61962,-0.60206,0 1/1:4:0,4:0:0:4:137:-12.2888,-1.20412,0 1/1:4:0,4:0:0:4:109:-9.78979,-1.20412,0 1/1:3:0,3:0:0:3:104:-9.39317,-0.90309,0 1/1:4:0,3:0:0:3:36:-3.27385,-0.90309,0 1/1:8:0,7:0:0:7:183:-16.1975,-2.10721,0 dDocent_Contig_6098 17 . A G 197.958 . AB=0.25;ABP=22.5536;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=249;DPB=249;DPRA=1.45833;EPP=26.8965;EPPR=519.821;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.363636;PAIREDR=0.815126;PAO=0;PQA=0;PQR=0;PRO=0;QA=432;QR=9384;RO=238;RPL=0;RPP=26.8965;RPPR=519.821;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=238;SRP=519.821;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:27,9:27:1067:9:350:-21.0177,0,-85.4871 0/0:69:67,2:67:2611:2:82:0,-12.9914,-227.36 0/0:27:27,0:27:1073:0:0:0,-8.12781,-96.8592 0/0:35:35,0:35:1343:0:0:0,-10.536,-121.122 0/0:45:45,0:45:1794:0:0:0,-13.5463,-161.68 0/0:37:37,0:37:1496:0:0:0,-11.1381,-134.882 dDocent_Contig_6099 11 . C A 157.34 . AB=0.181818;ABP=51.3749;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=300;DPB=300;DPRA=1.12245;EPP=24.725;EPPR=632.737;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.365517;PAO=0;PQA=0;PQR=0;PRO=0;QA=372;QR=11595;RO=290;RPL=0;RPP=24.725;RPPR=632.737;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=290;SRP=632.737;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:1043:0:0:0,-7.82678,-94.163 0/0:58:58,0:58:2328:0:0:0,-17.4597,-209.675 0/1:55:45,10:45:1814:10:372:-17.2569,0,-146.914 0/0:58:58,0:58:2321:0:0:0,-17.4597,-209.042 0/0:38:38,0:38:1485:0:0:0,-11.4391,-133.893 0/0:65:65,0:65:2604:0:0:0,-19.5669,-234.488 dDocent_Contig_6100 11 . C T 423.917 . AB=0.179856;ABP=126.753;AC=2;AF=0.166667;AN=12;AO=36;CIGAR=1X;DP=495;DPB=495;DPRA=1.47797;EPP=81.1833;EPPR=999.716;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.944444;PAIREDR=0.95207;PAO=0;PQA=0;PQR=0;PRO=0;QA=1404;QR=18300;RO=459;RPL=0;RPP=81.1833;RPPR=999.716;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=459;SRP=999.716;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:56:47,9:47:1891:9:357:-15.6349,0,-153.531 0/1:83:67,16:67:2625:16:607:-29.9787,0,-211.387 0/0:100:96,4:96:3848:4:161:0,-15.2275,-331.443 0/0:108:105,3:105:4144:3:119:0,-21.4158,-361.842 0/0:59:59,0:59:2363:0:0:0,-17.7608,-212.824 0/0:89:85,4:85:3429:4:160:0,-12.0082,-293.862 dDocent_Contig_6101 80 . C T 92.6639 . AB=0.16;ABP=53.2147;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=319;DPB=319;DPRA=1.27179;EPP=24.725;EPPR=673.995;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.592233;PAO=0;PQA=0;PQR=0;PRO=0;QA=350;QR=10915;RO=309;RPL=5;RPP=3.0103;RPPR=102.526;RPR=5;RUN=1;SAF=5;SAP=3.0103;SAR=5;SRF=214;SRP=102.526;SRR=95;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:50:42,8:42:1462:8:280:-10.4882,0,-116.821 0/0:41:41,0:41:1436:0:0:0,-12.3422,-129.533 0/0:46:46,0:46:1602:0:0:0,-13.8474,-144.462 0/0:56:56,0:56:2011:0:0:0,-16.8577,-181.258 0/0:52:52,0:52:1840:0:0:0,-15.6536,-165.871 0/0:74:72,2:72:2564:2:70:0,-15.6288,-224.356 dDocent_Contig_6102 1 . N G 73.4082 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=5.18177;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=20;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=153;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=3;SAP=5.18177;SAR=1;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-0.599591,-0.30103,0 1/1:2:0,2:0:0:2:80:-2.4684,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:38:-3.75861,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_6103 9 . A T 36.6671 . AB=0.107692;ABP=89.9026;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=1556;DPB=1556;DPRA=0.545699;EPP=35.5824;EPPR=3344.91;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=577;QR=58996;RO=1539;RPL=0;RPP=35.5824;RPPR=3344.91;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=1539;SRP=3344.91;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:55:52,3:52:2017:3:111:0,-6.20316,-171.41 0/1:65:58,7:58:2239:7:271:-5.18949,0,-182.162 0/0:96:93,3:93:3587:3:117:0,-17.9885,-312.038 0/0:93:93,0:93:3566:0:0:0,-27.9958,-321.063 0/0:651:650,0:650:24864:0:0:0,-195.669,-2235.96 0/0:596:593,2:593:22723:2:78:0,-172.099,-2036.4 dDocent_Contig_6104 8 . C T 177.01 . AB=0.148515;ABP=111.39;AC=3;AF=0.25;AN=12;AO=20;CIGAR=1X;DP=191;DPB=191;DPRA=1.81053;EPP=46.4397;EPPR=372.161;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.964706;PAO=0;PQA=0;PQR=0;PRO=0;QA=770;QR=6534;RO=170;RPL=0;RPP=46.4397;RPPR=372.161;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=170;SRP=372.161;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:718:0:0:0,-5.71957,-64.9437 0/1:31:26,4:26:1005:4:153:-4.73049,0,-81.3497 0/1:41:35,6:35:1336:6:233:-8.99785,0,-108.185 0/0:40:37,3:37:1429:3:111:0,-1.68842,-118.537 0/1:29:24,5:24:928:5:195:-9.19433,0,-75.1068 0/0:31:29,2:29:1118:2:78:0,-1.92846,-93.5188 dDocent_Contig_6105 98 . N T 91.686 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=88;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:51:-4.84444,-0.60206,0 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:30:-2.99957,-0.30103,0 dDocent_Contig_6108 23 . T C 17278.2 . AB=0.698187;ABP=266.389;AC=6;AF=0.5;AN=12;AO=539;CIGAR=1X11M;DP=772;DPB=770.5;DPRA=0;EPP=1173.43;EPPR=356.96;GTI=0;LEN=1;MEANALT=4.33333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.975881;PAIREDR=0.981595;PAO=0;PQA=0;PQR=0;PRO=0;QA=21694;QR=6112;RO=163;RPL=0;RPP=1173.43;RPPR=356.96;RPR=539;RUN=1;SAF=539;SAP=1173.43;SAR=0;SRF=163;SRP=356.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:106:30,0,13,59:30:1138:0,13,59:0,508,2379:-187.097,-196.128,-289.436,-154.364,-247.672,-243.758,0,-93.3269,-51.5551,-75.5661 0|1:151:40,0,5,103:40:1503:0,5,103:0,184,4144:-329.548,-341.589,-464.712,-326.552,-449.674,-448.169,0,-123.18,-108.14,-92.1738 0|1:112:16,9,13,72:16:613:9,13,72:324,499,2910:-235.117,-213.505,-261.103,-198.977,-222.856,-245.371,0,-23.8865,-9.35258,-28.6401 0|1:103:33,0,9,60:33:1209:0,9,60:0,358,2389:-186.764,-196.698,-295.492,-167.221,-266.014,-263.305,0,-98.7795,-69.2961,-80.7177 0|1:122:26,0,0,95:26:972:0,0,95:0,0,3797:-304.933,-312.76,-392.348,-312.76,-392.348,-392.348,0,-79.5969,-79.5969,-50.999 0|1:178:18,0,6,150:18:677:0,6,150:0,236,6075:-495.582,-501.001,-556.465,-481.588,-537.052,-535.246,0,-55.501,-36.078,-10.3465 dDocent_Contig_6109 17 . A G 579.538 . AB=0.255319;ABP=51.8915;AC=1;AF=0.0833333;AN=12;AO=31;CIGAR=1X;DP=502;DPB=502;DPRA=2.71852;EPP=70.3259;EPPR=1025.77;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.995754;PAO=0;PQA=0;PQR=0;PRO=0;QA=1258;QR=18704;RO=471;RPL=0;RPP=70.3259;RPPR=1025.77;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=471;SRP=1025.77;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:91:91,0:91:3591:0:0:0,-27.3937,-323.23 0/0:177:176,1:176:6943:1:41:0,-49.1877,-620.481 0/1:94:70,24:70:2821:24:972:-59.4767,0,-225.698 0/0:96:90,6:90:3606:6:245:0,-6.46941,-302.132 0/0:23:23,0:23:906:0:0:0,-6.92369,-81.8492 0/0:21:21,0:21:837:0:0:0,-6.32163,-75.6454 dDocent_Contig_6110 14 . T A 32733.4 . AB=0.804945;ABP=885.034;AC=7;AF=0.583333;AN=12;AO=1025;CIGAR=1X;DP=1245;DPB=1245;DPRA=0;EPP=2228.77;EPPR=480.734;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999024;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=40422;QR=8817;RO=220;RPL=0;RPP=2228.77;RPPR=480.734;RPR=1025;RUN=1;SAF=1025;SAP=2228.77;SAR=0;SRF=220;SRP=480.734;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:153:7,146:7:275:146:5725:-489.986,-20.9418,0 0/1:243:28,215:28:1129:215:8418:-684.065,0,-28.7382 0/1:188:18,170:18:721:170:6774:-552.773,0,-8.62245 0/1:233:39,194:39:1552:194:7674:-620.154,0,-69.767 0/1:158:49,109:49:1963:109:4300:-339.406,0,-129.304 0/1:270:79,191:79:3177:191:7531:-596.18,0,-204.713 dDocent_Contig_6111 33 . T C 15060.1 . AB=0.185773;ABP=3571.63;AC=5;AF=0.416667;AN=12;AO=773;CIGAR=1X;DP=4880;DPB=4880;DPRA=1.15744;EPP=1681.56;EPPR=8906.05;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999024;PAO=0;PQA=0;PQR=0;PRO=0;QA=30768;QR=160936;RO=4100;RPL=0;RPP=1681.56;RPPR=8906.05;RPR=773;RUN=1;SAF=773;SAP=1681.56;SAR=0;SRF=4100;SRP=8906.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:806:569,237:569:22297:237:9407:-603.437,0,-1762.35 0/1:1033:833,199:833:32654:199:7931:-402.294,0,-2625.07 0/1:649:560,89:560:22020:89:3512:-120.759,0,-1784.66 0/1:871:697,173:697:27462:173:6926:-360.807,0,-2207.07 0/0:719:714,0:714:27986:0:0:0,-214.935,-2516.11 0/1:802:727,75:727:28517:75:2992:-27.9364,0,-2322.72 dDocent_Contig_6112 32 . T A 139.319 . AB=0.0990415;ABP=440.087;AC=2;AF=0.166667;AN=12;AO=31;CIGAR=2X;DP=683;DPB=683;DPRA=1.69189;EPP=70.3259;EPPR=1418.81;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.976994;PAO=0;PQA=0;PQR=0;PRO=0;QA=1230;QR=25541;RO=652;RPL=0;RPP=70.3259;RPPR=1418.81;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=652;SRP=1418.81;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:57:57,0:57:2246:0:0:0,-17.1587,-202.328 0|1:148:133,15:133:5249:15:599:-9.69832,0,-427.757 0|1:165:149,16:149:5793:16:631:-7.45544,0,-471.573 0|0:102:102,0:102:4004:0:0:0,-30.7051,-360.403 0|0:76:76,0:76:2926:0:0:0,-22.8783,-263.467 0|0:135:135,0:135:5323:0:0:0,-40.639,-478.962 dDocent_Contig_6113 13 . C T 328.968 . AB=0.361111;ABP=9.04217;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=159;DPB=159;DPRA=1.46341;EPP=31.2394;EPPR=320.045;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.692308;PAIREDR=0.890411;PAO=0;PQA=0;PQR=0;PRO=0;QA=499;QR=5859;RO=146;RPL=0;RPP=31.2394;RPPR=320.045;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=146;SRP=320.045;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:1053:0:0:0,-7.82678,-95.0587 0/0:27:27,0:27:1085:0:0:0,-8.12781,-97.9339 0/0:28:28,0:28:1129:0:0:0,-8.42884,-101.887 0/0:29:29,0:29:1140:0:0:0,-8.72987,-102.876 0/0:13:13,0:13:524:0:0:0,-3.91339,-47.5068 0/1:36:23,13:23:928:13:499:-34.4197,0,-72.9829 dDocent_Contig_6114 25 . T C 63249.6 . AB=0.515836;ABP=11.8823;AC=6;AF=0.5;AN=12;AO=2101;CIGAR=1X;DP=4073;DPB=4073;DPRA=0;EPP=4565.27;EPPR=4280.81;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.996668;PAIREDR=0.999492;PAO=0;PQA=0;PQR=0;PRO=0;QA=84097;QR=78390;RO=1970;RPL=0;RPP=4565.27;RPPR=4280.81;RPR=2101;RUN=1;SAF=2101;SAP=4565.27;SAR=0;SRF=1970;SRP=4280.81;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:620:240,380:240:9505:380:15260:-1185.53,0,-668.237 0/1:825:499,326:499:19888:326:13003:-920.96,0,-1539.91 0/1:397:198,198:198:7835:198:7905:-591.395,0,-585.129 0/1:757:407,349:407:16225:349:13910:-1023.14,0,-1231.28 0/1:766:260,506:260:10347:506:20343:-1598.52,0,-699.975 0/1:708:366,342:366:14590:342:13676:-1016.64,0,-1098.86 dDocent_Contig_6115 26 . T C 24660.1 . AB=0.577283;ABP=75.1716;AC=6;AF=0.5;AN=12;AO=803;CIGAR=1X2M;DP=1391;DPB=1391;DPRA=0;EPP=1746.7;EPPR=1149.55;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.997509;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=32003;QR=20528;RO=528;RPL=0;RPP=1746.7;RPPR=1149.55;RPR=803;RUN=1;SAF=803;SAP=1746.7;SAR=0;SRF=528;SRP=1149.55;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:203:33,10,159:33:1299:10,159:403,6286:-507.328,-484.044,-587.891,0,-73.6492,-59.007 0|1:269:91,1,176:91:3537:1,176:27,7003:-549.284,-574.55,-864.867,0,-288.6,-237.746 0|1:119:37,11,71:37:1454:11,71:435,2847:-223.42,-198.762,-315.039,0,-83.7925,-98.2164 0|1:275:71,35,168:71:2730:35,168:1388,6728:-532.878,-440.001,-653.545,0,-109.823,-173.505 0|1:262:150,0,112:150:5832:0,112:0,4499:-325.968,-371.122,-850.333,0,-479.607,-445.892 0|1:263:146,0,117:146:5676:0,117:0,4640:-338.35,-382.301,-848.695,0,-466.787,-431.567 dDocent_Contig_6116 25 . G A 273.548 . AB=0.181818;ABP=80.3937;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=291;DPB=291;DPRA=0.866995;EPP=37.7539;EPPR=600.165;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.916364;PAO=0;PQA=0;PQR=0;PRO=0;QA=626;QR=10782;RO=275;RPL=0;RPP=37.7539;RPPR=600.165;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=275;SRP=600.165;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1290:0:0:0,-9.93399,-116.372 0/0:51:51,0:51:1999:0:0:0,-15.3525,-180.105 0/0:62:62,0:62:2459:0:0:0,-18.6639,-221.448 0/0:57:57,0:57:2219:0:0:0,-17.1587,-199.884 0/1:40:31,9:31:1210:9:352:-19.9995,0,-97.1298 0/1:48:41,7:41:1605:7:274:-10.5771,0,-130.24 dDocent_Contig_6117 10 . C A 62.2709 . AB=0.0897833;ABP=475.121;AC=1;AF=0.0833333;AN=12;AO=97;CIGAR=1X;DP=2173;DPB=2173;DPRA=0;EPP=213.643;EPPR=4510.99;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998555;PAO=0;PQA=0;PQR=0;PRO=0;QA=3855;QR=82658;RO=2076;RPL=0;RPP=213.643;RPPR=4510.99;RPR=97;RUN=1;SAF=97;SAP=213.643;SAR=0;SRF=2076;SRP=4510.99;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:323:294,29:294:11755:29:1160:-7.44894,0,-959.904 0/0:332:316,16:316:12612:16:645:0,-41.559,-1075.8 0/0:181:173,8:173:6852:8:316:0,-25.6806,-587.57 0/0:414:392,22:392:15515:22:859:0,-47.0033,-1317.54 0/0:467:462,5:462:18459:5:203:0,-121.928,-1641.13 0/0:456:439,17:439:17465:17:672:0,-76.4589,-1509.67 dDocent_Contig_6118 45 . A G 263.808 . AB=0.121212;ABP=249.769;AC=1;AF=0.0833333;AN=12;AO=47;CIGAR=1X;DP=1194;DPB=1194;DPRA=1;EPP=105.07;EPPR=2493.69;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1855;QR=45260;RO=1147;RPL=0;RPP=105.07;RPPR=2493.69;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=1147;SRP=2493.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:151:151,0:151:5974:0:0:0,-45.4555,-537.446 0/0:113:107,6:107:4250:6:239:0,-12.1332,-360.588 0/0:91:85,6:85:3377:6:232:0,-6.15216,-282.741 0/1:198:174,24:174:6880:24:969:-27.9037,0,-559.304 0/0:394:383,11:383:15152:11:415:0,-80.9132,-1324.86 0/0:247:247,0:247:9627:0:0:0,-74.3544,-865.863 dDocent_Contig_6119 27 . G A 1277.27 . AB=0.106421;ABP=2266.11;AC=2;AF=0.166667;AN=12;AO=252;CIGAR=1X;DP=4386;DPB=4386;DPRA=1.27926;EPP=550.221;EPPR=8979.88;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999274;PAO=0;PQA=0;PQR=0;PRO=0;QA=10005;QR=163469;RO=4134;RPL=0;RPP=550.221;RPPR=8979.88;RPR=252;RUN=1;SAF=252;SAP=550.221;SAR=0;SRF=4134;SRP=8979.88;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:593:593,0:593:23354:0:0:0,-178.511,-2099.89 0/0:722:712,10:712:28120:10:400:0,-180.985,-2491.97 0/0:638:608,30:608:23981:30:1201:0,-83.6979,-2047.9 0/0:751:718,33:718:28425:33:1322:0,-106.831,-2436.55 0/1:850:742,108:742:29472:108:4279:-129.192,0,-2393.97 0/1:832:761,71:761:30117:71:2803:-1.93071,0,-2457.4 dDocent_Contig_6120 8 . C A 39923.3 . AB=0.299118;ABP=1949.38;AC=6;AF=0.5;AN=12;AO=1661;CIGAR=1X;DP=5553;DPB=5553;DPRA=0;EPP=3609.83;EPPR=8441.35;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998796;PAIREDR=0.997427;PAO=0;PQA=0;PQR=0;PRO=0;QA=63074;QR=149523;RO=3886;RPL=0;RPP=3609.83;RPPR=8441.35;RPR=1661;RUN=1;SAF=1661;SAP=3609.83;SAR=0;SRF=3886;SRP=8441.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:702:458,244:458:17572:244:9251:-620.994,0,-1369.25 0/1:900:693,206:693:26636:206:7898:-439.618,0,-2124.64 0/1:736:513,223:513:19741:223:8495:-542.765,0,-1554.04 0/1:937:800,137:800:30789:137:5203:-186.213,0,-2487.02 0/1:1161:702,456:702:27027:456:17342:-1210.99,0,-2081.84 0/1:1117:720,395:720:27758:395:14885:-1002.98,0,-2160.51 dDocent_Contig_6121 10 . C T 210.786 . AB=0.144068;ABP=132.857;AC=3;AF=0.25;AN=12;AO=21;CIGAR=1X1M1X;DP=235;DPB=235;DPRA=1.49153;EPP=48.6112;EPPR=465.534;GTI=0;LEN=1;MEANALT=1.25;MQM=59.0952;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.380952;PAIREDR=0.938967;PAO=0;PQA=0;PQR=0;PRO=0;QA=836;QR=8342;RO=213;RPL=0;RPP=48.6112;RPPR=465.534;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=213;SRP=465.534;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:42:38,4:38:1492:4:162:-2.3237,0,-121.899 0|1:50:42,7:42:1659:7:272:-9.61298,0,-134.434 0|0:35:35,0:35:1358:0:0:0,-10.536,-122.489 0|0:24:24,0:24:931:0:0:0,-7.22472,-84.1011 0|1:26:20,6:20:784:6:242:-14.3307,0,-63.0571 0|0:58:54,4:54:2118:4:160:0,-2.67594,-176.043 dDocent_Contig_6122 21 . C T 377.22 . AB=0.174603;ABP=118.891;AC=2;AF=0.166667;AN=12;AO=24;CIGAR=1X;DP=483;DPB=483;DPRA=0.588816;EPP=55.1256;EPPR=999.716;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=927;QR=18102;RO=459;RPL=0;RPP=55.1256;RPPR=999.716;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=459;SRP=999.716;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:53:51,2:51:1986:2:77:0,-8.64639,-171.645 0/1:77:59,18:59:2302:18:690:-39.2441,0,-184.189 0/0:92:92,0:92:3637:0:0:0,-27.6948,-327.385 0/1:49:45,4:45:1786:4:160:-0.0329567,0,-146.216 0/0:122:122,0:122:4825:0:0:0,-36.7257,-434.192 0/0:90:90,0:90:3566:0:0:0,-27.0927,-320.988 dDocent_Contig_6123 8 . C T 4802.44 . AB=0.088033;ABP=1074.71;AC=6;AF=0.5;AN=12;AO=64;CIGAR=1X1M1X1M1X1M1X2M;DP=727;DPB=727;DPRA=0;EPP=141.985;EPPR=743.482;GTI=0;LEN=1;MEANALT=5.16667;MQM=28.5469;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0;PAIREDR=0.920821;PAO=0;PQA=0;PQR=0;PRO=0;QA=1810;QR=13281;RO=341;RPL=0;RPP=141.985;RPPR=743.482;RPR=64;RUN=1;SAF=64;SAP=141.985;SAR=0;SRF=341;SRP=743.482;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:73:31,27,1,11,0:31:1200:27,1,11,0:1072,24,432,0:-64.0232,0,-90.4843,-71.7693,-97.0269,-170.065,-44.2514,-69.519,-141.266,-139.541,-73.3551,-98.6121,-170.366,-142.852,-171.953 0|1:127:42,57,15,6,0:42:1619:57,15,6,0:2214,420,235,0:-128.201,0,-115.832,-111.618,-103.781,-240.068,-122.693,-114.843,-226.436,-253.856,-140.844,-132.991,-244.584,-255.662,-273.81 0|1:77:37,19,11,7,0:37:1453:19,11,7,0:739,358,274,0:-43.4235,0,-113.822,-28.6007,-93.5804,-144.813,-32.8845,-97.871,-126.454,-150.313,-54.5616,-119.542,-148.124,-152.42,-174.091 0|1:121:35,42,23,17,0:35:1375:42,23,17,0:1659,559,649,0:-116.996,0,-100.502,-90.095,-75.7155,-196.277,-79.2388,-64.8528,-154.919,-187.242,-127.532,-113.145,-203.2,-192.359,-240.647 0|1:166:98,36,8,10,8:98:3817:36,8,10,8:1413,264,386,322:-81.5734,0,-302.901,-91.8982,-294.558,-403.212,-82.1148,-284.779,-376.661,-392.831,-84.5327,-287.2,-379.082,-369.303,-395.855 0|1:163:98,29,6,18,9:98:3817:29,6,18,9:1152,185,679,364:-57.2495,0,-305.013,-73.3203,-300.309,-385.245,-34.8534,-261.847,-335.156,-343.171,-56.7322,-283.73,-357.039,-318.577,-367.764 dDocent_Contig_6125 9 . A G 711.416 . AB=0.220096;ABP=145.237;AC=4;AF=0.333333;AN=12;AO=50;CIGAR=1X;DP=316;DPB=316;DPRA=0;EPP=111.584;EPPR=580.622;GTI=0;LEN=1;MEANALT=1;MQM=35.84;MQMR=56.312;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.503759;PAO=0;PQA=0;PQR=0;PRO=0;QA=1919;QR=10148;RO=266;RPL=0;RPP=111.584;RPPR=580.622;RPR=50;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=266;SRP=580.622;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:23,1:23:861:1:39:0,-3.80112,-73.835 0/1:55:39,16:39:1500:16:615:-32.7109,0,-118.633 0/1:42:29,13:29:1101:13:497:-27.2498,0,-86.2376 0/1:55:45,10:45:1732:10:383:-14.3539,0,-138.693 0/0:83:80,3:80:3053:3:115:0,-15.4717,-263.281 0/1:57:50,7:50:1901:7:270:-4.04815,0,-152.397 dDocent_Contig_6126 107 . N A 263.354 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=11;CIGAR=1X;DP=12;DPB=12;DPRA=0;EPP=26.8965;EPPR=0;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=273;QR=0;RO=0;RPL=0;RPP=26.8965;RPPR=0;RPR=11;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:1:0,1:0:0:1:17:-1.69998,-0.30103,0 1/1:3:0,3:0:0:3:46:-4.29316,-0.90309,0 1/1:2:0,1:0:0:1:29:-2.71967,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:147:-13.5213,-1.50515,0 dDocent_Contig_6127 11 . C A 4136.88 . AB=0.110618;ABP=5943.71;AC=6;AF=0.5;AN=12;AO=499;CIGAR=1X;DP=4511;DPB=4511;DPRA=0;EPP=1086.58;EPPR=8669.36;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=59.9747;NS=6;NUMALT=1;ODDS=0;PAIRED=0.87976;PAIREDR=0.818592;PAO=0;PQA=0;PQR=0;PRO=0;QA=19753;QR=157841;RO=3991;RPL=0;RPP=1086.58;RPPR=8669.36;RPR=499;RUN=1;SAF=499;SAP=1086.58;SAR=0;SRF=3991;SRP=8669.36;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:644:570,74:570:22485:74:2944:-71.1959,0,-1827.92 0/1:921:828,90:828:32726:90:3536:-41.5146,0,-2664.65 0/1:541:481,59:481:18952:59:2310:-45.1084,0,-1541.24 0/1:844:746,98:746:29615:98:3890:-96.0377,0,-2408.66 0/1:777:702,71:702:27754:71:2814:-20.2824,0,-2262.4 0/1:784:664,107:664:26309:107:4259:-150.771,0,-2132.89 dDocent_Contig_6128 9 . A G 121.632 . AB=0.26087;ABP=14.4341;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=161;DPB=161;DPRA=1.09615;EPP=18.2106;EPPR=337.417;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.662338;PAO=0;PQA=0;PQR=0;PRO=0;QA=264;QR=5837;RO=154;RPL=0;RPP=18.2106;RPPR=337.417;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=154;SRP=337.417;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:695:0:0:0,-5.41854,-62.8842 0/0:25:25,0:25:965:0:0:0,-7.52575,-87.1627 0/0:26:26,0:26:988:0:0:0,-7.82678,-89.2305 0/0:35:35,0:35:1326:0:0:0,-10.536,-119.619 0/1:23:17,6:17:634:6:225:-13.6861,0,-50.467 0/0:34:33,1:33:1229:1:39:0,-6.33846,-107.005 dDocent_Contig_6129 22 . T A 3967.03 . AB=0.05;ABP=178.9;AC=0;AF=0;AN=12;AO=5;CIGAR=2M1X1M;DP=289;DPB=217.5;DPRA=0;EPP=13.8677;EPPR=309.188;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=59.6454;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.907801;PAO=0;PQA=0;PQR=0;PRO=0;QA=204;QR=5618;RO=141;RPL=0;RPP=13.8677;RPPR=309.188;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=141;SRP=309.188;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:45:15,30,0:15:581:30,0:1115,0:-87.0788,0,-37.2588,-91.5943,-46.2897,-137.511 0|0:63:47,16,0:47:1868:16,0:641,0:-39.0598,0,-149.361,-53.2082,-154.178,-206.987 0|0:31:24,7,0:24:965:7,0:280,0:-16.2393,0,-77.8194,-23.4641,-79.9266,-102.991 0|0:45:25,17,3:25:992:17,3:680,122:-48.4828,0,-76.5298,-45.9443,-71.583,-126.695 0|0:50:12,38,0:12:485:38,0:1463,0:-116.876,0,-28.9503,-120.488,-40.3895,-160.479 0|0:55:18,35,2:18:727:35,2:1292,82:-100.188,0,-49.3904,-98.8366,-53.1577,-158.178 dDocent_Contig_6130 105 . N A 2708.35 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=92;CIGAR=3X;DP=92;DPB=92;DPRA=0;EPP=202.786;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2994;QR=0;RO=0;RPL=0;RPP=202.786;RPPR=0;RPR=92;RUN=1;SAF=0;SAP=202.786;SAR=92;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:62:0,62:0:0:62:2010:-181.167,-18.6639,0 1|1:18:0,18:0:0:18:586:-53.0498,-5.41854,0 1|1:12:0,12:0:0:12:398:-36.1405,-3.61236,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_6131 55 . T C 9337.11 . AB=0.561856;ABP=22.3521;AC=6;AF=0.5;AN=12;AO=327;CIGAR=1X;DP=582;DPB=582;DPRA=0;EPP=713.082;EPPR=556.736;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.883792;PAIREDR=0.92549;PAO=0;PQA=0;PQR=0;PRO=0;QA=12432;QR=9735;RO=255;RPL=327;RPP=713.082;RPPR=556.736;RPR=0;RUN=1;SAF=327;SAP=713.082;SAR=0;SRF=255;SRP=556.736;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:69:35,34:35:1356:34:1295:-96.0538,0,-101.543 0/1:131:35,96:35:1311:96:3668:-290.766,0,-78.8318 0/1:102:31,71:31:1185:71:2703:-212.707,0,-76.232 0/1:92:36,56:36:1350:56:2088:-160.435,0,-94.087 0/1:93:59,34:59:2295:34:1285:-87.9266,0,-178.753 0/1:95:59,36:59:2238:36:1393:-97.0442,0,-173.032 dDocent_Contig_6132 39 . T C 125707 . AB=0.794329;ABP=2311.53;AC=8;AF=0.666667;AN=12;AO=3777;CIGAR=1X2M;DP=4517;DPB=4517;DPRA=0;EPP=8204.66;EPPR=1192.98;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.99947;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=151553;QR=21608;RO=548;RPL=0;RPP=8204.66;RPPR=1192.98;RPR=3777;RUN=1;SAF=3777;SAP=8204.66;SAR=0;SRF=548;SRP=1192.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:695:193,0,0,502:193:7625:0,0,502:0,0,20127:-1600.48,-1658.58,-2286.01,-1658.58,-2286.01,-2286.01,0,-627.823,-627.823,-476.706 0|1:902:149,0,0,753:149:5830:0,0,753:0,0,30246:-2447.8,-2492.65,-2971.96,-2492.65,-2971.96,-2971.96,0,-479.702,-479.702,-253.026 0|1:414:53,0,0,359:53:2091:0,0,359:0,0,14408:-1171.13,-1187.09,-1359.13,-1187.09,-1359.13,-1359.13,0,-172.032,-172.032,-63.9619 1|1:850:28,0,0,822:28:1109:0,0,822:0,0,33045:-2870.78,-2879.21,-2970.48,-2879.21,-2970.48,-2970.48,-155.774,-247.447,-247.447,0 1|1:599:17,30,32,518:17:687:30,32,518:1180,1242,20768:-1805.14,-1713.2,-1760.81,-1708.22,-1667.8,-1755.23,-99.291,-58.8715,-53.8984,0 0|1:1057:108,50,74,823:108:4266:50,74,823:1993,2880,32959:-2682.6,-2550.99,-2886.96,-2478.45,-2665.35,-2807.2,0,-186.904,-114.368,-103.278 dDocent_Contig_6133 30 . T C 29622.5 . AB=0.606436;ABP=162.022;AC=6;AF=0.5;AN=12;AO=980;CIGAR=1X3M;DP=1616;DPB=1616;DPRA=0;EPP=2131.05;EPPR=1177.78;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.11022e-16;PAIRED=0.985714;PAIREDR=0.983364;PAO=0;PQA=0;PQR=0;PRO=0;QA=38164;QR=19959;RO=541;RPL=0;RPP=2131.05;RPPR=1177.78;RPR=980;RUN=1;SAF=980;SAP=2131.05;SAR=0;SRF=541;SRP=1177.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:256:97,0,155:97:3527:0,155:0,6017:-465.134,-494.334,-782.362,0,-288.01,-241.35 0|1:336:115,0,214:115:4239:0,214:0,8354:-652.112,-686.731,-1033.37,0,-346.652,-282.231 0|1:180:50,0,124:50:1854:0,124:0,4804:-379.542,-394.593,-546.285,0,-151.679,-114.351 0|1:313:107,0,198:107:3987:0,198:0,7683:-598.982,-631.192,-957.557,0,-326.353,-266.749 0|1:263:78,36,148:78:2903:36,148:1407,5757:-449.58,-357.389,-584.156,0,-121.922,-193.046 0|1:268:94,33,141:94:3449:33,141:1300,5549:-428.125,-349.474,-621.43,0,-174.926,-239.436 dDocent_Contig_6134 54 . C A 119.618 . AB=0.0972222;ABP=408.834;AC=1;AF=0.0833333;AN=12;AO=57;CIGAR=1X;DP=1027;DPB=1027;DPRA=2.90066;EPP=126.784;EPPR=2105;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.982456;PAIREDR=0.997934;PAO=0;PQA=0;PQR=0;PRO=0;QA=2218;QR=38141;RO=968;RPL=57;RPP=126.784;RPPR=2105;RPR=0;RUN=1;SAF=57;SAP=126.784;SAR=0;SRF=968;SRP=2105;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:93:91,1:91:3532:1:29:0,-25.1448,-314.965 0/0:59:59,0:59:2321:0:0:0,-17.7608,-209.05 0/0:54:53,1:53:2100:1:8:0,-15.4556,-188.371 0/0:92:91,0:91:3629:0:0:0,-27.3937,-326.219 0/0:441:414,27:414:16351:27:1071:0,-36.0744,-1373.65 0/1:288:260,28:260:10208:28:1110:-13.4846,0,-831.401 dDocent_Contig_6135 1 . N T 95.1749 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=102;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:102:-9.51695,-0.90309,0 ./.:.:.:.:.:.:.:. dDocent_Contig_6137 70 . G C 7309.42 . AB=0.21831;ABP=100.879;AC=1;AF=0.0833333;AN=12;AO=31;CIGAR=1M1D3M1X1M;DP=752;DPB=706.857;DPRA=0;EPP=70.3259;EPPR=947.601;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1162;QR=16085;RO=435;RPL=31;RPP=70.3259;RPPR=947.601;RPR=0;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=435;SRP=947.601;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:157:110,0,45:110:4007:0,45:0,1647:-101.442,-134.556,-461.873,0,-327.294,-313.747 0|0:130:71,0,59:71:2606:0,59:0,2157:-155.225,-176.598,-389.632,0,-213.401,-195.64 0|0:99:65,0,34:65:2437:0,34:0,1275:-85.2378,-104.805,-304.416,0,-199.986,-189.751 0|0:204:153,0,51:153:5690:0,51:0,1938:-113.257,-159.315,-625.009,0,-466.072,-450.72 1|0:142:30,31,81:30:1118:31,81:1162,3053:-244.799,-158.66,-240.851,-3.64822,0,-70.7884 0|0:20:6,0,14:6:227:0,14:0,532:-42.2026,-44.0088,-62.6179,0,-18.9876,-14.7732 dDocent_Contig_6139 25 . A C 3518.34 . AB=0.341969;ABP=86.7414;AC=5;AF=0.416667;AN=12;AO=136;CIGAR=1X;DP=458;DPB=458;DPRA=0;EPP=298.331;EPPR=702.224;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.963235;PAIREDR=0.968944;PAO=0;PQA=0;PQR=0;PRO=0;QA=5447;QR=12808;RO=322;RPL=0;RPP=298.331;RPPR=702.224;RPR=136;RUN=1;SAF=136;SAP=298.331;SAR=0;SRF=322;SRP=702.224;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:57:46,11:46:1857:11:449:-23.6072,0,-150.175 0/1:87:76,11:76:3024:11:432:-13.0357,0,-246.054 0/0:72:68,4:68:2684:4:160:0,-6.89073,-226.901 0/1:81:64,17:64:2542:17:684:-37.5027,0,-204.536 0/1:89:33,56:33:1292:56:2228:-173.884,0,-89.7503 0/1:72:35,37:35:1409:37:1494:-113.026,0,-105.387 dDocent_Contig_6140 89 . A G 238.943 . AB=0.26;ABP=28.0257;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=353;DPB=353;DPRA=1.16564;EPP=39.9253;EPPR=732.625;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.985119;PAO=0;PQA=0;PQR=0;PRO=0;QA=577;QR=11546;RO=336;RPL=17;RPP=39.9253;RPPR=732.625;RPR=0;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=336;SRP=732.625;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:68:67,1:67:2306:1:28:0,-17.6703,-205.009 0/0:72:69,3:69:2378:3:103:0,-12.0642,-204.677 0/1:50:37,13:37:1268:13:446:-25.4172,0,-99.3699 0/0:74:74,0:74:2533:0:0:0,-22.2762,-228.228 0/0:41:41,0:41:1406:0:0:0,-12.3422,-126.838 0/0:48:48,0:48:1655:0:0:0,-14.4494,-149.24 dDocent_Contig_6141 21 . G A 280.634 . AB=0.292683;ABP=18.3165;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=387;DPB=387;DPRA=0.825472;EPP=46.4397;EPPR=799.941;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.953678;PAO=0;PQA=0;PQR=0;PRO=0;QA=762;QR=14473;RO=367;RPL=0;RPP=46.4397;RPPR=799.941;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=367;SRP=799.941;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:50,0:50:1979:0:0:0,-15.0515,-178.298 0/0:84:84,0:84:3349:0:0:0,-25.2865,-301.471 0/0:73:67,6:67:2648:6:222:0,-1.63713,-218.116 0/0:78:78,0:78:3062:0:0:0,-23.4803,-275.674 0/1:41:29,12:29:1139:12:462:-29.5863,0,-90.448 0/0:61:59,2:59:2296:2:78:0,-10.9601,-199.398 dDocent_Contig_6142 8 . C A 31.9784 . AB=0.1;ABP=141.985;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=299;DPB=299;DPRA=0.689266;EPP=26.8965;EPPR=628.394;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.363636;PAIREDR=0.826389;PAO=0;PQA=0;PQR=0;PRO=0;QA=416;QR=11028;RO=288;RPL=0;RPP=26.8965;RPPR=628.394;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=288;SRP=628.394;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:21,1:21:806:1:37:0,-2.92483,-69.1675 0/0:52:52,0:52:1987:0:0:0,-15.6536,-179.07 0/1:46:42,4:42:1611:4:150:-0.0179888,0,-131.409 0/1:54:48,6:48:1836:6:229:-4.71969,0,-149.236 0/0:68:68,0:68:2602:0:0:0,-20.47,-234.373 0/0:57:57,0:57:2186:0:0:0,-17.1587,-196.962 dDocent_Contig_6143 18 . T C 500.152 . AB=0.112871;ABP=660.39;AC=1;AF=0.0833333;AN=12;AO=63;CIGAR=1X;DP=4113;DPB=4113;DPRA=2.65899;EPP=139.813;EPPR=8788.79;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999753;PAO=0;PQA=0;PQR=0;PRO=0;QA=2480;QR=161389;RO=4046;RPL=0;RPP=139.813;RPPR=8788.79;RPR=63;RUN=1;SAF=63;SAP=139.813;SAR=0;SRF=4046;SRP=8788.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:381:381,0:381:15100:0:0:0,-114.692,-1357.87 0/0:270:268,0:268:10670:0:0:0,-80.676,-959.35 0/0:339:337,2:337:13394:2:64:0,-95.9734,-1198.4 0/1:505:448,57:448:17845:57:2260:-51.5381,0,-1452.53 0/0:1139:1137,1:1137:45474:1:40:0,-338.971,-4084.26 0/0:1479:1475,3:1475:58906:3:116:0,-434.284,-5284.99 dDocent_Contig_6144 17 . G A 114.956 . AB=0.126316;ABP=118.235;AC=3;AF=0.25;AN=12;AO=15;CIGAR=1X;DP=183;DPB=183;DPRA=1.40625;EPP=35.5824;EPPR=367.818;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.761905;PAO=0;PQA=0;PQR=0;PRO=0;QA=610;QR=6754;RO=168;RPL=0;RPP=35.5824;RPPR=367.818;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=168;SRP=367.818;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:44:40,4:40:1587:4:163:-1.81311,0,-129.815 0/0:33:33,0:33:1330:0:0:0,-9.93399,-119.959 0/0:40:37,3:37:1496:3:122:0,-0.668707,-123.508 0/1:39:33,6:33:1334:6:244:-10.5987,0,-108.575 0/1:12:10,2:10:405:2:81:-4.07337,0,-33.1977 0/0:15:15,0:15:602:0:0:0,-4.51545,-54.5176 dDocent_Contig_6145 12 . T G 5355.49 . AB=0.248631;ABP=504.092;AC=1;AF=0.0833333;AN=12;AO=294;CIGAR=1X;DP=3583;DPB=3583;DPRA=2.30649;EPP=641.423;EPPR=7140.64;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998175;PAO=0;PQA=0;PQR=0;PRO=0;QA=11677;QR=131891;RO=3287;RPL=0;RPP=641.423;RPPR=7140.64;RPR=294;RUN=1;SAF=294;SAP=641.423;SAR=0;SRF=3287;SRP=7140.64;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:341:340,0:340:13621:0:0:0,-102.35,-1224.43 0/0:395:395,0:395:15887:0:0:0,-118.907,-1428.52 0/0:313:313,0:313:12561:0:0:0,-94.2224,-1129.55 0/0:615:614,0:614:24632:0:0:0,-184.832,-2214.22 0/1:913:686,227:686:27555:227:9027:-537.072,0,-2202.57 0/0:1006:939,67:939:37635:67:2650:0,-64.2033,-3144.9 dDocent_Contig_6146 9 . A G 74.3919 . AB=0.119658;ABP=150.021;AC=4;AF=0.333333;AN=12;AO=18;CIGAR=1X;DP=204;DPB=204;DPRA=0;EPP=42.0968;EPPR=406.904;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9785;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=684;QR=7117;RO=186;RPL=0;RPP=42.0968;RPPR=406.904;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=186;SRP=406.904;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:18,3:18:691:3:111:-4.03115,0,-56.2025 0/1:26:23,3:23:882:3:115:-2.89811,0,-71.8686 0/1:29:25,4:25:961:4:156:-5.68742,0,-78.0747 0/0:33:31,2:31:1187:2:72:0,-3.09808,-100.29 0/0:54:52,2:52:1998:2:78:0,-8.85215,-172.653 0/1:41:37,4:37:1398:4:152:-1.70697,0,-113.762 dDocent_Contig_6147 20 . G A 6767.67 . AB=0.425494;ABP=29.8672;AC=6;AF=0.5;AN=12;AO=237;CIGAR=5M1X;DP=557;DPB=560.833;DPRA=0;EPP=517.649;EPPR=634.909;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.991561;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9416;QR=11526;RO=291;RPL=0;RPP=517.649;RPPR=634.909;RPR=237;RUN=1;SAF=237;SAP=517.649;SAR=0;SRF=291;SRP=634.909;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:73:31,11,31:31:1229:11,31:439,1223:-91.2774,-64.4532,-162.303,0,-65.0029,-91.8266 0|1:58:31,2,25:31:1228:2,25:81,1008:-73.7545,-76.4071,-176.873,0,-94.3836,-93.5375 0|1:99:49,10,39:49:1959:10,39:389,1518:-109.981,-92.7648,-251.125,0,-129.408,-149.633 0|1:65:35,0,27:35:1390:0,27:0,1080:-78.5134,-89.0494,-203.485,0,-114.521,-106.393 0|1:149:75,0,72:75:2987:0,72:0,2869:-213.642,-236.219,-482.181,0,-245.952,-224.277 0|1:113:70,0,43:70:2733:0,43:0,1718:-120.821,-141.893,-366.54,0,-225.042,-212.098 dDocent_Contig_6148 35 . T C 66.2274 . AB=0.14;ABP=59.2949;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=384;DPB=384;DPRA=0.813187;EPP=20.3821;EPPR=819.484;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0;PAIREDR=0.539894;PAO=0;PQA=0;PQR=0;PRO=0;QA=295;QR=14985;RO=376;RPL=0;RPP=20.3821;RPPR=819.484;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=376;SRP=819.484;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:49:49,0:49:1967:0:0:0,-14.7505,-177.222 0/0:74:74,0:74:2942:0:0:0,-22.2762,-264.872 0/0:56:56,0:56:2209:0:0:0,-16.8577,-198.976 0/0:94:94,0:94:3774:0:0:0,-28.2968,-339.663 0/1:50:43,7:43:1703:7:254:-8.14562,0,-138.434 0/0:61:60,1:60:2390:1:41:0,-14.2683,-211.153 dDocent_Contig_6149 14 . T A 3108.4 . AB=0.219847;ABP=449.535;AC=4;AF=0.333333;AN=12;AO=161;CIGAR=1X;DP=1022;DPB=1022;DPRA=0;EPP=352.617;EPPR=1872.65;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.997677;PAO=0;PQA=0;PQR=0;PRO=0;QA=6391;QR=33940;RO=861;RPL=0;RPP=352.617;RPPR=1872.65;RPR=161;RUN=1;SAF=161;SAP=352.617;SAR=0;SRF=861;SRP=1872.65;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:131:129,2:129:5081:2:82:0,-31.6553,-449.417 0/1:181:138,43:138:5429:43:1711:-99.722,0,-433.989 0/1:75:63,12:63:2473:12:488:-21.6937,0,-200.134 0/1:102:93,9:93:3649:9:354:-1.51574,0,-297.742 0/0:236:221,15:221:8763:15:601:0,-16.617,-733.764 0/1:297:217,80:217:8545:80:3155:-194.623,0,-679.208 dDocent_Contig_6150 9 . A G 176.039 . AB=0.109375;ABP=342.303;AC=2;AF=0.166667;AN=12;AO=41;CIGAR=1X;DP=899;DPB=899;DPRA=0.761497;EPP=92.0407;EPPR=1861.79;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=59.861;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992991;PAO=0;PQA=0;PQR=0;PRO=0;QA=1587;QR=32582;RO=856;RPL=0;RPP=92.0407;RPPR=1861.79;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=856;SRP=1861.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:98:85,13:85:3253:13:500:-15.8461,0,-263.363 0/1:158:143,15:143:5403:15:580:-4.97955,0,-436.593 0/0:127:126,1:126:4786:1:39:0,-34.3342,-426.808 0/0:155:144,10:144:5476:10:390:0,-11.2805,-457.304 0/0:174:171,2:171:6518:2:78:0,-45.071,-579.131 0/0:187:187,0:187:7146:0:0:0,-56.2926,-642.944 dDocent_Contig_6151 1 . N G 75.9287 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=80;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:80:-7.59179,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6152 40 . A C 4112.99 . AB=0.32438;ABP=132.671;AC=3;AF=0.25;AN=12;AO=175;CIGAR=1X;DP=934;DPB=934;DPRA=0;EPP=383.018;EPPR=1651.16;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9341;NS=6;NUMALT=1;ODDS=0;PAIRED=0.982857;PAIREDR=0.932806;PAO=0;PQA=0;PQR=0;PRO=0;QA=6929;QR=29688;RO=759;RPL=0;RPP=383.018;RPPR=1651.16;RPR=175;RUN=1;SAF=175;SAP=383.018;SAR=0;SRF=759;SRP=1651.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:141:134,7:134:5213:7:282:0,-16.6926,-443.308 0/1:172:155,17:155:6032:17:643:-6.40871,0,-490.907 0/0:127:119,8:119:4647:8:315:0,-9.51905,-389.466 0/0:182:179,3:179:7056:3:91:0,-46.3043,-625.984 0/1:146:57,89:57:2217:89:3556:-276.114,0,-155.763 0/1:166:115,51:115:4523:51:2042:-133.997,0,-357.051 dDocent_Contig_6153 13 . C T 160.606 . AB=0.147727;ABP=97.8642;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=412;DPB=412;DPRA=1.36327;EPP=42.0968;EPPR=856.399;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.964377;PAO=0;PQA=0;PQR=0;PRO=0;QA=681;QR=15349;RO=393;RPL=0;RPP=42.0968;RPPR=856.399;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=393;SRP=856.399;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:53:53,0:53:2063:0:0:0,-15.9546,-185.883 0/0:64:64,0:64:2515:0:0:0,-19.2659,-226.519 0/0:54:54,0:54:2123:0:0:0,-16.2556,-191.272 0/0:74:74,0:74:2908:0:0:0,-22.2762,-261.852 0/0:79:73,5:73:2840:5:195:0,-5.94634,-237.83 0/1:88:75,13:75:2900:13:486:-17.5834,0,-234.647 dDocent_Contig_6154 13 . A G 183.876 . AB=0.121951;ABP=206.599;AC=2;AF=0.166667;AN=12;AO=28;CIGAR=1X;DP=743;DPB=743;DPRA=0.608225;EPP=63.8115;EPPR=1555.61;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997203;PAO=0;PQA=0;PQR=0;PRO=0;QA=1091;QR=27240;RO=715;RPL=0;RPP=63.8115;RPPR=1555.61;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=715;SRP=1555.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:117:109,8:109:4137:8:314:0,-6.59503,-343.785 0/1:89:81,8:81:3121:8:309:-1.38097,0,-254.241 0/1:75:63,12:63:2438:12:468:-19.8934,0,-197.037 0/0:178:178,0:178:6762:0:0:0,-53.5833,-608.466 0/0:99:99,0:99:3751:0:0:0,-29.802,-337.704 0/0:185:185,0:185:7031:0:0:0,-55.6905,-632.646 dDocent_Contig_6155 98 . N A 86.0908 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=84;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:41:-3.89396,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 1/1:2:0,2:0:0:2:14:-1.33,-0.60206,0 dDocent_Contig_6156 48 . T A 294.505 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=2;CIGAR=8M1X8M;DP=294;DPB=292.353;DPRA=1;EPP=7.35324;EPPR=571.936;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=46;QR=10163;RO=262;RPL=0;RPP=7.35324;RPPR=571.936;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=262;SRP=571.936;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:39:34,5,0:34:1323:5,0:163,0:-3.24208,0,-107.608,-13.4771,-109.114,-122.257 0|0:75:63,12,0:63:2478:12,0:448,0:-18.0837,0,-200.62,-37.0486,-204.232,-240.905 0|0:25:22,2,0:22:851:2,0:73,0:0,-0.689198,-69.9621,-6.62266,-70.5641,-76.5256 0|0:60:50,9,0:50:1924:9,0:344,0:-13.3423,0,-155.433,-28.3938,-158.143,-186.364 0|0:40:38,0,2:38:1445:0,2:0,46:0,-11.4391,-130.085,-7.67446,-126.558,-125.956 0|0:55:55,0,0:55:2142:0,0:0,0:0,-16.5566,-192.985,-16.5566,-192.985,-192.985 dDocent_Contig_6157 29 . G A 414.042 . AB=0.126667;ABP=366.196;AC=3;AF=0.25;AN=12;AO=54;CIGAR=1X;DP=625;DPB=625;DPRA=0;EPP=120.27;EPPR=1240.75;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.648148;PAIREDR=0.763158;PAO=0;PQA=0;PQR=0;PRO=0;QA=2154;QR=22747;RO=570;RPL=0;RPP=120.27;RPPR=1240.75;RPR=54;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=570;SRP=1240.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:88:75,13:75:2986:13:521:-20.7452,0,-242.332 0/1:107:93,14:93:3715:14:550:-17.6315,0,-302.153 0/0:85:80,5:80:3166:5:205:0,-6.75254,-266.165 0/1:105:93,11:93:3743:11:439:-8.24936,0,-305.259 0/0:96:93,3:93:3715:3:120:0,-17.7112,-323.173 0/0:144:136,8:136:5422:8:319:0,-14.2715,-458.74 dDocent_Contig_6158 25 . G A 262.682 . AB=0.268293;ABP=22.1298;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=266;DPB=266;DPRA=1.02273;EPP=35.5824;EPPR=548.05;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.933333;PAIREDR=0.832669;PAO=0;PQA=0;PQR=0;PRO=0;QA=601;QR=9942;RO=251;RPL=0;RPP=35.5824;RPPR=548.05;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=251;SRP=548.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:685:0:0:0,-5.11751,-61.9797 0/0:48:48,0:48:1895:0:0:0,-14.4494,-170.758 0/0:44:44,0:44:1724:0:0:0,-13.2453,-155.383 0/0:67:67,0:67:2667:0:0:0,-20.169,-240.162 0/1:41:30,11:30:1194:11:442:-27.7904,0,-95.3939 0/0:49:45,4:45:1777:4:159:0,-0.0581378,-145.463 dDocent_Contig_6159 63 . C T 3865.92 . AB=0.279588;ABP=249.02;AC=3;AF=0.25;AN=12;AO=175;CIGAR=1X;DP=1387;DPB=1387;DPRA=0.672327;EPP=383.018;EPPR=2630.49;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6755;QR=46871;RO=1210;RPL=175;RPP=383.018;RPPR=2630.49;RPR=0;RUN=1;SAF=175;SAP=383.018;SAR=0;SRF=1210;SRP=2630.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:103:81,22:81:3123:22:854:-46.1635,0,-250.166 0/1:257:183,74:183:7076:74:2841:-178.454,0,-559.214 0/1:223:156,67:156:5980:67:2602:-167.196,0,-470.912 0/0:207:196,11:196:7607:11:436:0,-22.7197,-644.713 0/0:318:316,0:316:12354:0:0:0,-95.1255,-1110.99 0/0:279:278,1:278:10731:1:22:0,-81.7874,-963.009 dDocent_Contig_6160 24 . T C 58739.1 . AB=0.119927;ABP=6217.65;AC=6;AF=0.5;AN=12;AO=594;CIGAR=1X6M;DP=4953;DPB=4953;DPRA=0;EPP=1292.86;EPPR=3900.8;GTI=0;LEN=1;MEANALT=7.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=23592;QR=70398;RO=1795;RPL=0;RPP=1292.86;RPPR=3900.8;RPR=594;RUN=1;SAF=594;SAP=1292.86;SAR=0;SRF=1795;SRP=3900.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:683:136,395,46,101:136:5372:395,46,101:15376,1804,4005:-1222.64,0,-323.14,-1115.23,-293.7,-1543.43,-933.95,-112.42,-1227.65,-1345.59 0|1:896:315,336,126,114:315:12384:336,126,114:13107,4924,4496:-982.481,0,-917.47,-672.524,-613.835,-1653.21,-707.432,-648.743,-1321.27,-1691.73 0|1:438:91,216,81,50:91:3516:216,81,50:8487,3153,1986:-670.633,0,-223.709,-438.916,-29.6206,-703.265,-534.538,-125.241,-564.159,-808.219 0|1:886:240,419,148,75:240:9388:419,148,75:16465,5791,3004:-1281.96,0,-645.707,-878.093,-295.727,-1605.38,-1106.74,-524.37,-1402.46,-1856 0|1:964:464,272,95,130:464:18228:272,95,130:10689,3695,5182:-739.468,0,-1417.3,-575.528,-1195.56,-2046.11,-452.432,-1072.46,-1647.99,-1912.48 0|1:1086:549,358,44,124:549:21510:358,44,124:14025,1734,4919:-987.959,0,-1660.94,-1010.58,-1626.06,-2766.04,-748.343,-1363.82,-2374.4,-2479.72 dDocent_Contig_6161 8 . C T 779.153 . AB=0.158824;ABP=346.767;AC=3;AF=0.25;AN=12;AO=69;CIGAR=1X;DP=585;DPB=585;DPRA=0;EPP=152.842;EPPR=1123.49;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.869565;PAIREDR=0.833333;PAO=0;PQA=0;PQR=0;PRO=0;QA=2634;QR=19804;RO=516;RPL=0;RPP=152.842;RPPR=1123.49;RPR=69;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=516;SRP=1123.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:56:52,4:52:1994:4:156:0,-2.44039,-165.28 0/0:83:78,5:78:2997:5:195:0,-7.06129,-251.971 0/0:106:100,6:100:3841:6:233:0,-10.5694,-324.45 0/1:100:84,16:84:3237:16:605:-24.6819,0,-261.37 0/1:108:94,14:94:3592:14:524:-14.9859,0,-290.891 0/1:132:108,24:108:4143:24:921:-43.4694,0,-333.212 dDocent_Contig_6162 79 . G A 148.511 . AB=0.147368;ABP=105.618;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=288;DPB=288;DPRA=2.46114;EPP=33.4109;EPPR=597.994;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.857143;PAIREDR=0.941606;PAO=0;PQA=0;PQR=0;PRO=0;QA=496;QR=9918;RO=274;RPL=14;RPP=33.4109;RPPR=597.994;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=274;SRP=597.994;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1278:0:0:0,-10.536,-115.322 0/0:75:75,0:75:2675:0:0:0,-22.5772,-240.98 0/0:25:25,0:25:891:0:0:0,-7.52575,-80.5032 0/0:36:36,0:36:1315:0:0:0,-10.8371,-118.651 0/0:22:22,0:22:807:0:0:0,-6.62266,-72.9559 0/1:95:81,14:81:2952:14:496:-16.3739,0,-237.3 dDocent_Contig_6163 1 . N G 77.8076 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_6164 1 . N G 74.0386 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=78;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:78:-7.40278,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6167 12 . A C 32.8266 . AB=0.0869565;ABP=650.581;AC=1;AF=0.0833333;AN=12;AO=163;CIGAR=1X;DP=3423;DPB=3423;DPRA=0.955357;EPP=356.96;EPPR=7071.15;GTI=0;LEN=1;MEANALT=1;MQM=59.8834;MQMR=59.9966;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6491;QR=129209;RO=3255;RPL=0;RPP=356.96;RPPR=7071.15;RPR=163;RUN=1;SAF=163;SAP=356.96;SAR=0;SRF=3255;SRP=7071.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:437:399,38:399:15716:38:1509:-4.50409,0,-1281.72 0/0:677:620,57:620:24750:57:2256:0,-0.590547,-2022.09 0/0:457:426,31:426:16950:31:1245:0,-25.2515,-1411.85 0/0:676:639,37:639:25345:37:1481:0,-70.189,-2145.56 0/0:519:519,0:519:20626:0:0:0,-156.235,-1854.66 0/0:657:652,0:652:25822:0:0:0,-196.272,-2321.39 dDocent_Contig_6168 17 . T A 580.221 . AB=0.12069;ABP=582.868;AC=3;AF=0.25;AN=12;AO=77;CIGAR=1X;DP=1089;DPB=1089;DPRA=0;EPP=170.214;EPPR=2200.54;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.987013;PAIREDR=0.98913;PAO=0;PQA=0;PQR=0;PRO=0;QA=3073;QR=38883;RO=1012;RPL=0;RPP=170.214;RPPR=2200.54;RPR=77;RUN=1;SAF=77;SAP=170.214;SAR=0;SRF=1012;SRP=2200.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:122:109,13:109:4140:13:515:-9.96886,0,-335.94 0/0:200:188,12:188:7187:12:472:0,-17.3817,-603.82 0/1:165:140,25:140:5415:25:999:-40.5329,0,-437.573 0/1:177:159,18:159:6147:18:730:-12.7422,0,-499.794 0/0:208:203,5:203:7827:5:201:0,-44.1433,-685.659 0/0:217:213,4:213:8167:4:156:0,-50.9094,-720.304 dDocent_Contig_6169 98 . N A 103.49 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=104;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6170 1 . N G 114.653 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:123:-11.4648,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6171 68 . G A 1344.12 . AB=0.223684;ABP=204.614;AC=3;AF=0.25;AN=12;AO=75;CIGAR=1X;DP=559;DPB=559;DPRA=0;EPP=165.871;EPPR=1054;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.92;PAIREDR=0.869835;PAO=0;PQA=0;PQR=0;PRO=0;QA=2809;QR=18753;RO=484;RPL=75;RPP=165.871;RPPR=1054;RPR=0;RUN=1;SAF=75;SAP=165.871;SAR=0;SRF=484;SRP=1054;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:55:52,3:52:1966:3:95:0,-7.69642,-168.321 0/1:121:108,13:108:4108:13:493:-8.29142,0,-333.385 0/0:75:74,1:74:2902:1:41:0,-18.4827,-257.198 0/0:125:122,3:122:4727:3:115:0,-26.9046,-414.655 0/1:81:57,24:57:2233:24:897:-56.6471,0,-176.771 0/1:102:71,31:71:2817:31:1168:-74.6951,0,-222.95 dDocent_Contig_6172 10 . A G 77376.1 . AB=0.0649137;ABP=2004.05;AC=1;AF=0.0833333;AN=12;AO=123;CIGAR=1X1M1X;DP=2672;DPB=2672;DPRA=0;EPP=270.101;EPPR=443.819;GTI=0;LEN=1;MEANALT=3.33333;MQM=59.7967;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.99187;PAIREDR=0.995074;PAO=0;PQA=0;PQR=0;PRO=0;QA=4865;QR=8060;RO=203;RPL=0;RPP=270.101;RPPR=443.819;RPR=123;RUN=1;SAF=123;SAP=270.101;SAR=0;SRF=203;SRP=443.819;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:302:11,8,283:11:432:8,283:313,11305:-977.43,-955.009,-988.129,-49.662,-59.4592,0 0|0:474:28,16,427:28:1107:16,427:639,17003:-1424.11,-1379.91,-1466.19,-37.4397,-75.9069,0 0|0:264:19,9,236:19:745:9,236:362,9519:-784.218,-760.104,-818.654,-9.7902,-41.2065,0 0|0:415:28,11,375:28:1108:11,375:437,14922:-1240.17,-1212.63,-1300.5,-21.6914,-76.9076,0 0|0:639:66,16,545:66:2644:16,545:631,21785:-1772.1,-1740.06,-1953.06,0,-165.92,-53.7677 1|0:578:51,63,462:51:2024:63,462:2483,18506:-1542.8,-1354.5,-1502.14,-37.0393,0,-64.5754 dDocent_Contig_6173 191 . G C 52.5248 . AB=0.0967742;ABP=221.909;AC=1;AF=0.0833333;AN=12;AO=22;CIGAR=1X;DP=721;DPB=721;DPRA=1.33025;EPP=50.7827;EPPR=1518.7;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=856;QR=28020;RO=698;RPL=22;RPP=50.7827;RPPR=1518.7;RPR=0;RUN=1;SAF=0;SAP=50.7827;SAR=22;SRF=0;SRP=1518.7;SRR=698;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:110:110,0:110:4411:0:0:0,-33.1133,-396.921 0/0:133:126,7:126:5058:7:266:0,-15.7407,-430.78 0/0:92:91,0:91:3664:0:0:0,-27.3937,-329.386 0/1:155:140,15:140:5641:15:590:-6.77535,0,-460.83 0/0:82:82,0:82:3274:0:0:0,-24.6845,-294.718 0/0:149:149,0:149:5972:0:0:0,-44.8535,-537.242 dDocent_Contig_6174 98 . N A 64.5902 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=68;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6175 7 . A C 130.076 . AB=0.128205;ABP=143.488;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=901;DPB=901;DPRA=1.32216;EPP=39.9253;EPPR=1920.42;GTI=0;LEN=1;MEANALT=1;MQM=50.4706;MQMR=59.7463;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.91393;PAO=0;PQA=0;PQR=0;PRO=0;QA=630;QR=33522;RO=883;RPL=0;RPP=39.9253;RPPR=1920.42;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=883;SRP=1920.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:218:218,0:218:8297:0:0:0,-65.6245,-746.417 0/0:210:209,1:209:7982:1:39:0,-59.3429,-714.084 0/1:117:102,15:102:3866:15:552:-14.5305,0,-312.823 0/0:186:185,1:185:7020:1:39:0,-52.1181,-627.778 0/0:105:104,0:104:3887:0:0:0,-31.3071,-349.376 0/0:65:65,0:65:2470:0:0:0,-19.5669,-222.427 dDocent_Contig_6176 98 . N A 215.1 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=7;CIGAR=2X;DP=7;DPB=14.5;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=9.4572;PAIRED=1;PAIREDR=0;PAO=7;PQA=229;PQR=0;PRO=0;QA=239;QR=0;RO=0;RPL=7;RPP=18.2106;RPPR=0;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:7:0,7:0:0:7:239:-21.51,-2.10721,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_6177 44 . C T 1653.76 . AB=0.13197;ABP=1268.89;AC=3;AF=0.25;AN=12;AO=171;CIGAR=1X;DP=2313;DPB=2313;DPRA=0.794839;EPP=374.332;EPPR=4654.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998133;PAO=0;PQA=0;PQR=0;PRO=0;QA=6599;QR=82214;RO=2142;RPL=0;RPP=374.332;RPPR=4654.3;RPR=171;RUN=1;SAF=171;SAP=374.332;SAR=0;SRF=2142;SRP=4654.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:271:234,37:234:9001:37:1385:-43.3314,0,-728.138 0/0:369:341,28:341:13101:28:1072:0,-14.2999,-1081.54 0/1:475:421,54:421:16179:54:2101:-46.3042,0,-1312.08 0/1:330:279,51:279:10604:51:2001:-80.9626,0,-854.53 0/0:403:402,1:402:15606:1:40:0,-117.319,-1399.55 0/0:465:465,0:465:17723:0:0:0,-139.979,-1593.94 dDocent_Contig_6178 33 . C T 133.999 . AB=0.123894;ABP=141.85;AC=3;AF=0.25;AN=12;AO=16;CIGAR=1X;DP=249;DPB=249;DPRA=0.883333;EPP=37.7539;EPPR=508.963;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.613734;PAO=0;PQA=0;PQR=0;PRO=0;QA=653;QR=9325;RO=233;RPL=0;RPP=37.7539;RPPR=508.963;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=233;SRP=508.963;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:29,5:29:1153:5:204:-8.50901,0,-93.8103 0/1:44:39,5:39:1544:5:204:-5.49871,0,-125.955 0/1:35:31,4:31:1251:4:164:-4.61385,0,-102.322 0/0:46:44,2:44:1765:2:81:0,-6.16165,-151.376 0/0:55:55,0:55:2198:0:0:0,-16.5566,-197.992 0/0:35:35,0:35:1414:0:0:0,-10.536,-127.51 dDocent_Contig_6179 16 . A C 1304.42 . AB=0.317647;ABP=52.1111;AC=6;AF=0.5;AN=12;AO=54;CIGAR=1X;DP=170;DPB=170;DPRA=0;EPP=120.27;EPPR=254.901;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.796296;PAIREDR=0.853448;PAO=0;PQA=0;PQR=0;PRO=0;QA=2119;QR=4639;RO=116;RPL=0;RPP=120.27;RPPR=254.901;RPR=54;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=116;SRP=254.901;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:14,6:14:556:6:244:-16.3182,0,-44.3629 0/1:46:22,24:22:897:24:943:-71.3234,0,-67.1871 0/1:18:14,4:14:569:4:161:-9.45673,0,-46.1332 0/1:34:25,9:25:994:9:352:-21.8016,0,-79.522 0/1:21:18,3:18:700:3:106:-3.56247,0,-56.9948 0/1:31:23,8:23:923:8:313:-19.1998,0,-74.0426 dDocent_Contig_6180 19 . C A 307.679 . AB=0.229508;ABP=41.7764;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=647;DPB=647;DPRA=0.562376;EPP=37.7539;EPPR=1373.21;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=641;QR=25298;RO=631;RPL=0;RPP=37.7539;RPPR=1373.21;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=631;SRP=1373.21;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:997:0:0:0,-7.52575,-90.0234 0/0:78:78,0:78:3155:0:0:0,-23.4803,-284.007 0/0:81:79,2:79:3174:2:82:0,-16.6038,-277.937 0/1:61:47,14:47:1860:14:559:-32.2907,0,-149.248 0/0:244:244,0:244:9746:0:0:0,-73.4513,-876.518 0/0:158:158,0:158:6366:0:0:0,-47.5627,-572.65 dDocent_Contig_6181 21 . G C 96.954 . AB=0.2;ABP=22.5536;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=513;DPB=513;DPRA=0.256148;EPP=13.8677;EPPR=1103.95;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.925049;PAO=0;PQA=0;PQR=0;PRO=0;QA=204;QR=20170;RO=507;RPL=0;RPP=13.8677;RPPR=1103.95;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=507;SRP=1103.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:92:92,0:92:3602:0:0:0,-27.6948,-324.223 0/0:125:124,0:124:4919:0:0:0,-37.3277,-442.198 0/0:80:80,0:80:3211:0:0:0,-24.0824,-289.044 0/0:118:118,0:118:4729:0:0:0,-35.5215,-425.507 0/1:25:20,5:20:808:5:204:-11.2183,0,-65.5106 0/0:73:73,0:73:2901:0:0:0,-21.9752,-261.183 dDocent_Contig_6182 33 . T C 2413.75 . AB=0.274021;ABP=127.65;AC=5;AF=0.416667;AN=12;AO=77;CIGAR=3M1X14M;DP=281;DPB=264.556;DPRA=0;EPP=170.214;EPPR=359.132;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=0.883117;PAIREDR=0.878049;PAO=0;PQA=0;PQR=0;PRO=0;QA=3087;QR=6434;RO=164;RPL=0;RPP=170.214;RPPR=359.132;RPR=77;RUN=1;SAF=77;SAP=170.214;SAR=0;SRF=164;SRP=359.132;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:29:15,0,14:15:585:0,14:0,558:-41.8317,-46.3472,-94.4288,0,-48.4756,-44.2612 0|1:50:35,3,12:35:1381:3,12:114,488:-29.7375,-30.9303,-143.649,0,-104.297,-110.032 0|1:49:35,0,12:35:1380:0,12:0,487:-29.6329,-40.1689,-153.7,0,-113.534,-109.921 0|1:73:48,3,22:48:1884:3,22:123,881:-58.1189,-62.4149,-216.453,0,-144.777,-148.307 0|0:38:9,22,7:9:356:22,7:845,270:-66.6487,0,-22.6818,-47.1862,-7.13737,-74.3813 0|1:42:22,9,10:22:848:9,10:328,403:-26.6273,-6.46701,-73.3897,0,-42.8728,-66.6476 dDocent_Contig_6183 9 . A C 35.4433 . AB=0.100775;ABP=181.593;AC=1;AF=0.0833333;AN=12;AO=53;CIGAR=1X;DP=1258;DPB=1258;DPRA=1.48859;EPP=118.098;EPPR=2619.63;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.962264;PAIREDR=0.984232;PAO=0;PQA=0;PQR=0;PRO=0;QA=2023;QR=46097;RO=1205;RPL=0;RPP=118.098;RPPR=2619.63;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=1205;SRP=2619.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:149:149,0:149:5715:0:0:0,-44.8535,-514.319 0/0:252:247,5:247:9446:5:195:0,-57.9354,-831.917 0/1:129:116,13:116:4422:13:484:-5.06709,0,-359.215 0/0:227:213,14:213:8182:14:537:0,-19.6602,-687.482 0/0:211:208,3:208:7892:3:115:0,-52.7924,-699.377 0/0:290:272,18:272:10440:18:692:0,-24.6856,-876.61 dDocent_Contig_6184 23 . A T 1294.08 . AB=0.0421687;ABP=909.692;AC=1;AF=0.0833333;AN=12;AO=30;CIGAR=4M1X9M;DP=848;DPB=862.857;DPRA=2.33904;EPP=68.1545;EPPR=1451.38;GTI=0;LEN=1;MEANALT=6.25;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.7;PAIREDR=0.854573;PAO=0;PQA=0;PQR=0;PRO=0;QA=1160;QR=26099;RO=667;RPL=0;RPP=68.1545;RPPR=1451.38;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=667;SRP=1451.38;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:92:82,0,10,0:82:3209:0,10,0:0,382,0:-7.03941,-31.7239,-295.582,0,-264.241,-261.23,-31.7239,-295.582,-264.241,-295.582 0|0:185:154,4,10,9:154:6001:4,10,9:133,338,337:0,-35.6007,-527.655,-18.9763,-501.474,-509.223,-18.7543,-501.266,-484.64,-509.316 0|0:73:62,5,2,0:62:2444:5,2,0:188,77,0:0,-3.25839,-202.851,-12.3389,-198.034,-212.834,-18.6639,-204.356,-213.436,-219.759 0|0:186:143,0,33,1:143:5635:0,33,1:0,1266,40:-60.853,-103.9,-567.507,0,-463.601,-453.667,-100.605,-564.211,-460.306,-563.91 0|1:159:128,9,7,12:128:4987:9,7,12:350,271,473:-0.3824,-10.1533,-417.313,-16.6551,-397.762,-424.416,0,-381.109,-387.611,-406.259 0|0:153:98,15,31,8:98:3823:15,31,8:573,1174,310:-66.7353,-49.2256,-358.962,0,-267.242,-304.919,-70.7747,-338.017,-288.791,-382.619 dDocent_Contig_6185 201 . T C 1825.75 . AB=0.375;ABP=35.5824;AC=3;AF=0.25;AN=12;AO=90;CIGAR=1X;DP=340;DPB=340;DPRA=2.4;EPP=198.443;EPPR=543.707;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2878;QR=9046;RO=249;RPL=90;RPP=198.443;RPPR=543.707;RPR=0;RUN=1;SAF=0;SAP=198.443;SAR=90;SRF=0;SRP=543.707;SRR=249;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1277:0:0:0,-10.536,-115.233 0/1:82:59,23:59:2146:23:741:-42.3118,0,-168.716 0/1:60:34,25:34:1247:25:811:-55.3588,0,-94.5968 0/0:42:42,0:42:1525:0:0:0,-12.6433,-137.538 0/0:23:23,0:23:822:0:0:0,-6.92369,-74.3012 0/1:98:56,42:56:2029:42:1326:-90.126,0,-153.372 dDocent_Contig_6186 15 . G T 8084.69 . AB=0.429864;ABP=31.3377;AC=4;AF=0.333333;AN=12;AO=285;CIGAR=1X;DP=741;DPB=741;DPRA=4.25;EPP=621.88;EPPR=993.202;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11276;QR=18097;RO=456;RPL=0;RPP=621.88;RPPR=993.202;RPR=285;RUN=1;SAF=285;SAP=621.88;SAR=0;SRF=456;SRP=993.202;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:189:63,126:63:2544:126:4983:-391.456,0,-172.195 0/1:187:166,21:166:6579:21:845:-20.0693,0,-535.554 0/1:95:52,43:52:2068:43:1701:-124.716,0,-157.708 0/1:192:97,95:97:3804:95:3747:-279.449,0,-284.564 0/0:58:58,0:58:2288:0:0:0,-17.4597,-206.078 0/0:20:20,0:20:814:0:0:0,-6.0206,-73.5741 dDocent_Contig_6187 10 . A C 1645.37 . AB=0.208;ABP=280.733;AC=2;AF=0.166667;AN=12;AO=79;CIGAR=1X;DP=931;DPB=931;DPRA=1.16009;EPP=174.557;EPPR=1850.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3154;QR=33802;RO=851;RPL=0;RPP=174.557;RPPR=1850.93;RPR=79;RUN=1;SAF=79;SAP=174.557;SAR=0;SRF=851;SRP=1850.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:156:156,0:156:6208:0:0:0,-46.9607,-558.484 0/0:125:124,1:124:4938:1:41:0,-33.5342,-440.218 0/0:167:166,0:166:6583:0:0:0,-49.971,-591.784 0/0:108:108,0:108:4317:0:0:0,-32.5112,-388.471 0/1:189:163,26:163:6412:26:1040:-36.9966,0,-519.952 0/1:186:134,52:134:5344:52:2073:-130.762,0,-424.814 dDocent_Contig_6188 117 . T C 175.956 . AB=0.119444;ABP=455.859;AC=2;AF=0.166667;AN=12;AO=99;CIGAR=1X;DP=1275;DPB=1275;DPRA=0;EPP=217.986;EPPR=2556.66;GTI=0;LEN=1;MEANALT=1;MQM=50.9495;MQMR=59.9762;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0505051;PAIREDR=0.973639;PAO=0;PQA=0;PQR=0;PRO=0;QA=3310;QR=39418;RO=1176;RPL=0;RPP=217.986;RPPR=2556.66;RPR=99;RUN=1;SAF=0;SAP=217.986;SAR=99;SRF=0;SRP=2556.66;SRR=1176;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:160:139,21:139:4675:21:712:-15.9302,0,-372.746 0/0:162:149,13:149:5022:13:421:0,-10.6348,-414.029 0/0:240:219,21:219:7335:21:709:0,-8.39396,-596.403 0/1:200:178,22:178:5971:22:722:-4.88712,0,-477.338 0/0:220:205,15:205:6929:15:505:0,-20.6188,-578.124 0/0:293:286,7:286:9486:7:241:0,-66.486,-832.065 dDocent_Contig_6189 11 . A T 1049.71 . AB=0.123016;ABP=314.082;AC=2;AF=0.166667;AN=12;AO=32;CIGAR=3X1M1X;DP=842;DPB=842;DPRA=1.05995;EPP=72.4974;EPPR=1575.16;GTI=0;LEN=1;MEANALT=3.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.977901;PAO=0;PQA=0;PQR=0;PRO=0;QA=1268;QR=28567;RO=724;RPL=0;RPP=72.4974;RPPR=1575.16;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=724;SRP=1575.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:108:97,0,6:97:3825:0,6:0,240:0,-29.1999,-343.929,-9.38848,-324.159,-322.353 0|0:170:159,0,5:159:6261:0,5:0,202:0,-47.8638,-562.931,-31.1862,-546.278,-544.773 0|0:122:84,0,30:84:3323:0,30:0,1170:-70.8843,-96.1708,-369.65,0,-273.493,-264.462 0|0:190:179,1,7:179:7068:1,7:41,281:0,-50.4993,-631.778,-30.7283,-608.925,-610.202 0|1:109:86,12,6:86:3386:12,6:477,243:-13.397,0,-274.938,-19.2409,-258.512,-295.978 0|1:143:119,19,0:119:4704:19,0:750,0:-25.912,0,-381.405,-61.7346,-387.125,-448.837 dDocent_Contig_6190 12 . C A 1682.19 . AB=0.168111;ABP=555.057;AC=4;AF=0.333333;AN=12;AO=110;CIGAR=1X;DP=905;DPB=905;DPRA=0;EPP=241.872;EPPR=1729.33;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9774;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.963522;PAO=0;PQA=0;PQR=0;PRO=0;QA=4392;QR=31792;RO=795;RPL=0;RPP=241.872;RPPR=1729.33;RPR=110;RUN=1;SAF=110;SAP=241.872;SAR=0;SRF=795;SRP=1729.33;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:140:138,2:138:5512:2:80:0,-34.5526,-488.314 0/0:188:177,11:177:7069:11:446:0,-16.098,-595.374 0/1:136:119,17:119:4768:17:681:-20.6806,0,-388.069 0/1:163:140,23:140:5593:23:891:-31.4281,0,-454.065 0/1:69:53,16:53:2148:16:638:-36.9836,0,-172.716 0/1:209:168,41:168:6702:41:1656:-86.3489,0,-539.982 dDocent_Contig_6191 11 . A T 3149.62 . AB=0.374194;ABP=45.6272;AC=5;AF=0.416667;AN=12;AO=116;CIGAR=1X;DP=353;DPB=353;DPRA=1.44186;EPP=254.901;EPPR=511.135;GTI=0;LEN=1;MEANALT=1.2;MQM=57.4828;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.431034;PAIREDR=0.42735;PAO=0;PQA=0;PQR=0;PRO=0;QA=4638;QR=9400;RO=234;RPL=0;RPP=254.901;RPPR=511.135;RPR=116;RUN=1;SAF=116;SAP=254.901;SAR=0;SRF=234;SRP=511.135;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:53:30,23:30:1196:23:929:-67.3691,0,-91.9595 0/1:62:37,25:37:1473:25:1005:-71.9393,0,-114.151 0/1:35:25,10:25:1017:10:398:-25.5742,0,-81.2858 0/1:95:47,45:47:1904:45:1788:-132.808,0,-143.454 0/0:43:43,0:43:1715:0:0:0,-12.9443,-154.572 0/1:65:52,13:52:2095:13:518:-26.4934,0,-169.163 dDocent_Contig_6192 12 . A G 206.398 . AB=0.104027;ABP=408.857;AC=1;AF=0.0833333;AN=12;AO=41;CIGAR=1X;DP=2805;DPB=2805;DPRA=0.524752;EPP=92.0407;EPPR=6002.79;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998552;PAO=0;PQA=0;PQR=0;PRO=0;QA=1644;QR=108030;RO=2763;RPL=0;RPP=92.0407;RPPR=6002.79;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=2763;SRP=6002.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:474:473,0:473:18503:0:0:0,-142.387,-1663.56 0/0:646:646,0:646:25246:0:0:0,-194.465,-2270.21 0/0:295:295,0:295:11549:0:0:0,-88.8038,-1038.73 0/0:807:807,0:807:31641:0:0:0,-242.931,-2845.09 0/1:298:267,31:267:10399:31:1240:-22.1627,0,-845.647 0/0:285:275,10:275:10692:10:404:0,-49.0731,-924.976 dDocent_Contig_6193 98 . N C 664.019 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=19;CIGAR=10I3X1I3X;DP=23;DPB=68.3333;DPRA=0;EPP=44.2683;EPPR=0;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=39;PQA=1239;PQR=0;PRO=0;QA=728;QR=0;RO=0;RPL=19;RPP=44.2683;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=44.2683;SAR=19;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:7:0,7:0:0:7:265:-23.8917,-2.10721,0 1|1:9:0,5:0:0:5:192:-17.3612,-1.50515,0 .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:76:-6.89492,-0.60206,0 1|1:3:0,3:0:0:3:117:-10.5278,-0.90309,0 1|1:2:0,2:0:0:2:78:-7.02668,-0.60206,0 dDocent_Contig_6195 68 . G C 36.899 . AB=0.0964912;ABP=164.233;AC=2;AF=0.166667;AN=12;AO=18;CIGAR=1X;DP=401;DPB=401;DPRA=1.805;EPP=42.0968;EPPR=834.684;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.765013;PAO=0;PQA=0;PQR=0;PRO=0;QA=725;QR=15114;RO=383;RPL=18;RPP=42.0968;RPPR=834.684;RPR=0;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=383;SRP=834.684;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:46:41,5:41:1595:5:204:-4.89665,0,-129.937 0/0:111:107,4:107:4256:4:163:0,-18.3559,-367.944 0/0:66:64,2:64:2545:2:80:0,-12.2762,-221.594 0/0:70:69,1:69:2731:1:40:0,-17.0764,-241.916 0/0:40:40,0:40:1542:0:0:0,-12.0412,-139.023 0/1:68:62,6:62:2445:6:238:-1.32411,0,-199.738 dDocent_Contig_6196 9 . A C 2742.32 . AB=0.347134;ABP=66.7437;AC=6;AF=0.5;AN=12;AO=109;CIGAR=1X;DP=314;DPB=314;DPRA=0;EPP=239.701;EPPR=448.162;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.899083;PAIREDR=0.902439;PAO=0;PQA=0;PQR=0;PRO=0;QA=4185;QR=7879;RO=205;RPL=0;RPP=239.701;RPPR=448.162;RPR=109;RUN=1;SAF=109;SAP=239.701;SAR=0;SRF=205;SRP=448.162;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:50:27,23:27:1023:23:893:-65.6377,0,-77.3254 0/1:44:31,13:31:1179:13:499:-32.0116,0,-93.1601 0/1:45:18,27:18:700:27:1031:-79.5517,0,-49.7878 0/1:56:24,32:24:928:32:1218:-93.0519,0,-66.9787 0/1:62:53,9:53:2045:9:350:-13.1975,0,-165.62 0/1:57:52,5:52:2004:5:194:-0.674135,0,-163.437 dDocent_Contig_6197 1 . N G 120.78 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=122;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:40:-3.99568,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_6198 98 . N A 1058.07 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=35;CIGAR=4X;DP=35;DPB=36.5;DPRA=0;EPP=79.0118;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=5;PQA=145;PQR=0;PRO=0;QA=1160;QR=0;RO=0;RPL=35;RPP=79.0118;RPPR=0;RPR=0;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:3:0,3:0:0:3:94:-8.43908,-0.90309,0 1|1:7:0,7:0:0:7:232:-20.9684,-2.10721,0 1|1:5:0,5:0:0:5:171:-15.3865,-1.50515,0 1|1:5:0,5:0:0:5:165:-15.1751,-1.50515,0 1|1:15:0,15:0:0:15:498:-45.1386,-4.51545,0 .:.:.:.:.:.:.:. dDocent_Contig_6199 13 . A T 1933.22 . AB=0.178571;ABP=530.678;AC=4;AF=0.333333;AN=12;AO=118;CIGAR=1X;DP=867;DPB=867;DPRA=0;EPP=259.244;EPPR=1629.44;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.813559;PAIREDR=0.913218;PAO=0;PQA=0;PQR=0;PRO=0;QA=4707;QR=29673;RO=749;RPL=0;RPP=259.244;RPPR=1629.44;RPR=118;RUN=1;SAF=118;SAP=259.244;SAR=0;SRF=749;SRP=1629.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:116:104,12:104:4130:12:479:-8.54154,0,-336.77 0/1:164:141,23:141:5549:23:913:-33.1077,0,-449.889 0/1:97:86,11:86:3398:11:439:-10.6641,0,-276.669 0/1:211:152,59:152:6042:59:2351:-148.23,0,-480.043 0/0:126:119,7:119:4726:7:283:0,-12.0862,-399.404 0/0:153:147,6:147:5828:6:242:0,-23.9006,-502.171 dDocent_Contig_6200 25 . A C 304.703 . AB=0.163793;ABP=116.9;AC=3;AF=0.25;AN=12;AO=23;CIGAR=1X;DP=194;DPB=194;DPRA=2.57143;EPP=52.9542;EPPR=374.332;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=927;QR=6823;RO=171;RPL=0;RPP=52.9542;RPPR=374.332;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=171;SRP=374.332;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:50:43,7:43:1695:7:286:-11.0633,0,-137.726 0/1:44:37,7:37:1487:7:283:-12.5983,0,-120.831 0/0:26:25,1:25:1012:1:40:0,-3.8311,-87.3776 0/1:22:17,5:17:673:5:203:-12.0304,0,-54.2736 0/0:14:14,0:14:564:0:0:0,-4.21442,-51.103 0/0:38:35,3:35:1392:3:115:0,-0.716755,-114.811 dDocent_Contig_6201 10 . T A 16249.7 . AB=0.048218;ABP=848.66;AC=0;AF=0;AN=12;AO=23;CIGAR=2M1X4M1X6M;DP=1012;DPB=1013.93;DPRA=0;EPP=52.9542;EPPR=584.965;GTI=0;LEN=1;MEANALT=6.66667;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.988806;PAO=0;PQA=0;PQR=0;PRO=0;QA=904;QR=10486;RO=268;RPL=0;RPP=52.9542;RPPR=584.965;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=268;SRP=584.965;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:134:36,2,4,14,71:36:1385:2,4,14,71:81,148,556,2786:-218.267,-222.424,-335.525,-216.997,-324.019,-329.495,-183.334,-290.357,-284.929,-292.822,0,-107.027,-101.6,-67.9345,-92.3341 0|0:239:53,0,1,32,147:53:2070:0,1,32,147:0,38,1289,5842:-464.986,-480.941,-651.105,-477.824,-647.989,-647.688,-374.7,-544.864,-541.748,-535.231,0,-170.166,-167.05,-63.9197,-125.915 0|0:120:35,0,6,12,60:35:1381:0,6,12,60:0,179,491,2421:-189.06,-199.596,-313.228,-185.309,-298.939,-297.133,-159.073,-272.707,-258.418,-269.094,0,-113.652,-99.3663,-73.1244,-95.5898 0|0:176:64,0,19,16,73:64:2514:0,19,16,73:0,719,652,2871:-216.871,-236.137,-442.911,-177.197,-383.97,-378.25,-182.345,-389.121,-330.179,-384.304,0,-206.776,-147.836,-152.984,-184.801 0|0:206:44,14,0,29,108:44:1715:14,0,29,108:553,0,1149,4266:-337.746,-305.488,-442.23,-350.991,-446.444,-491.947,-256.431,-351.884,-397.388,-388.658,0,-95.4512,-140.955,-46.3942,-108.444 0|0:137:36,7,0,23,68:36:1421:7,0,23,68:270,0,922,2676:-209.258,-197.928,-312.746,-220.095,-314.853,-337.02,-144.136,-238.895,-261.062,-254.138,0,-94.7606,-116.927,-40.9663,-96.4573 dDocent_Contig_6202 107 . G T 578.873 . AB=0.173913;ABP=194.194;AC=6;AF=0.5;AN=12;AO=36;CIGAR=1X;DP=207;DPB=207;DPRA=0;EPP=81.1833;EPPR=374.332;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.416667;PAIREDR=0.74269;PAO=0;PQA=0;PQR=0;PRO=0;QA=1435;QR=6805;RO=171;RPL=0;RPP=81.1833;RPPR=374.332;RPR=36;RUN=1;SAF=0;SAP=81.1833;SAR=36;SRF=0;SRP=374.332;SRR=171;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:29:21,8:21:841:8:299:-18.5291,0,-67.2728 0/1:46:38,8:38:1501:8:326:-15.8625,0,-121.486 0/1:42:35,7:35:1377:7:284:-13.2907,0,-111.54 0/1:33:26,7:26:1049:7:285:-16.0904,0,-84.7668 0/1:41:37,4:37:1467:4:162:-2.62452,0,-119.933 0/1:16:14,2:14:570:2:79:-2.68076,0,-46.8257 dDocent_Contig_6203 17 . T C 39.7767 . AB=0.0889831;ABP=349.305;AC=1;AF=0.0833333;AN=12;AO=31;CIGAR=1X;DP=1572;DPB=1572;DPRA=0.980095;EPP=70.3259;EPPR=3349.25;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.998702;PAO=0;PQA=0;PQR=0;PRO=0;QA=1252;QR=61162;RO=1541;RPL=0;RPP=70.3259;RPPR=3349.25;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=1541;SRP=3349.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:288:288,0:288:11452:0:0:0,-86.6966,-1029.94 0/0:281:271,10:271:10747:10:405:0,-47.779,-929.757 0/0:120:120,0:120:4788:0:0:0,-36.1236,-430.834 0/1:236:215,21:215:8536:21:847:-5.5005,0,-696.747 0/0:356:356,0:356:14097:0:0:0,-107.167,-1267.72 0/0:291:291,0:291:11542:0:0:0,-87.5997,-1038.04 dDocent_Contig_6204 69 . C A 124.855 . AB=0.117241;ABP=187.526;AC=1;AF=0.0833333;AN=12;AO=30;CIGAR=1X;DP=726;DPB=726;DPRA=1.12281;EPP=68.1545;EPPR=1510.01;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.966667;PAIREDR=0.966859;PAO=0;PQA=0;PQR=0;PRO=0;QA=1101;QR=26870;RO=694;RPL=30;RPP=68.1545;RPPR=1510.01;RPR=0;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=694;SRP=1510.01;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:117:117,0:117:4399:0:0:0,-35.2205,-395.984 0/0:120:115,5:115:4369:5:157:0,-21.6883,-378.843 0/0:97:96,0:96:3715:0:0:0,-28.8989,-334.302 0/0:119:110,8:110:4347:8:307:0,-7.85074,-363.222 0/1:145:128,17:128:4990:17:637:-14.0084,0,-405.354 0/0:128:128,0:128:5050:0:0:0,-38.5318,-454.409 dDocent_Contig_6205 1 . N G 199.797 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=202;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:120:-11.1873,-0.90309,0 ./.:.:.:.:.:.:.:. dDocent_Contig_6206 120 . G A 163.811 . AB=0.181818;ABP=61.0478;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=2X;DP=713;DPB=713;DPRA=0.510046;EPP=29.068;EPPR=1523.04;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=416;QR=24391;RO=700;RPL=0;RPP=29.068;RPPR=1523.04;RPR=12;RUN=1;SAF=0;SAP=29.068;SAR=12;SRF=0;SRP=1523.04;SRR=700;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:121:121,0:121:4162:0:0:0,-36.4246,-374.774 0|0:134:134,0:134:4628:0:0:0,-40.338,-416.694 0|0:51:51,0:51:1798:0:0:0,-15.3525,-162.103 0|1:66:54,12:54:1900:12:416:-17.904,0,-151.412 0|0:231:231,0:231:8070:0:0:0,-69.5379,-726.345 0|0:110:109,0:109:3833:0:0:0,-32.8123,-344.816 dDocent_Contig_6207 20 . G A 208.027 . AB=0.147368;ABP=105.618;AC=1;AF=0.0833333;AN=12;AO=21;CIGAR=1M2D1M1X;DP=753;DPB=744.6;DPRA=0.773481;EPP=48.6112;EPPR=1583.84;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=847;QR=28779;RO=728;RPL=0;RPP=48.6112;RPPR=1583.84;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=728;SRP=1583.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:109:109,0:109:4286:0:0:0,-32.8123,-385.734 0|0:203:199,0:199:7879:0:0:0,-59.905,-708.386 0|0:105:105,0:105:4173:0:0:0,-31.6081,-375.557 0|0:126:126,0:126:5007:0:0:0,-37.9298,-450.542 0|0:115:108,7:108:4246:7:285:0,-8.59404,-356.122 0|1:95:81,14:81:3188:14:562:-22.3256,0,-258.419 dDocent_Contig_6208 10 . T A 74850 . AB=0.50912;ABP=6.57514;AC=6;AF=0.5;AN=12;AO=2512;CIGAR=1X;DP=4934;DPB=4934;DPRA=0;EPP=5457.75;EPPR=5255.8;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999204;PAIREDR=0.999587;PAO=0;PQA=0;PQR=0;PRO=0;QA=99883;QR=97103;RO=2419;RPL=0;RPP=5457.75;RPPR=5255.8;RPR=2512;RUN=1;SAF=2512;SAP=5457.75;SAR=0;SRF=2419;SRP=5255.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:706:472,234:472:18898:234:9321:-625.8,0,-1486.69 0/1:836:472,364:472:18956:364:14484:-1050.8,0,-1452.74 0/1:663:354,308:354:14201:308:12300:-906.649,0,-1077.5 0/1:749:456,292:456:18317:292:11496:-808.3,0,-1421.4 0/1:1065:308,756:308:12396:756:30120:-2387.4,0,-794.014 0/1:915:357,558:357:14335:558:22162:-1717.27,0,-1013.59 dDocent_Contig_6209 51 . T A 700.472 . AB=0.244444;ABP=79.5909;AC=4;AF=0.333333;AN=12;AO=36;CIGAR=1X;DP=215;DPB=215;DPRA=0;EPP=81.1833;EPPR=391.704;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.52514;PAO=0;PQA=0;PQR=0;PRO=0;QA=1417;QR=7183;RO=179;RPL=36;RPP=81.1833;RPPR=391.704;RPR=0;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=179;SRP=391.704;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:28,7:28:1128:7:285:-15.4884,0,-91.2641 0/1:39:28,11:28:1115:11:417:-26.1311,0,-88.8913 0/0:43:41,2:41:1656:2:82:0,-5.16461,-141.484 0/1:29:21,8:21:846:8:316:-20.0737,0,-67.7177 0/0:37:36,1:36:1423:1:41:0,-7.04354,-124.225 0/1:32:25,7:25:1015:7:276:-15.5758,0,-82.0095 dDocent_Contig_6210 186 . A C 308.421 . AB=0.147059;ABP=150.159;AC=1;AF=0.0833333;AN=12;AO=29;CIGAR=1X;DP=1681;DPB=1681;DPRA=0.505216;EPP=65.983;EPPR=3590.28;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999395;PAO=0;PQA=0;PQR=0;PRO=0;QA=1161;QR=65520;RO=1652;RPL=29;RPP=65.983;RPPR=3590.28;RPR=0;RUN=1;SAF=0;SAP=65.983;SAR=29;SRF=0;SRP=3590.28;SRR=1652;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:432:432,0:432:17180:0:0:0,-130.045,-1544.82 0/0:317:317,0:317:12543:0:0:0,-95.4265,-1127.98 0/0:294:294,0:294:11702:0:0:0,-88.5028,-1052.35 0/0:299:299,0:299:11849:0:0:0,-90.008,-1065.58 0/0:203:194,9:194:7646:9:350:0,-29.2543,-655.902 0/1:136:116,20:116:4600:20:811:-32.365,0,-372.979 dDocent_Contig_6211 39 . A C 901.848 . AB=0.271429;ABP=66.5414;AC=2;AF=0.166667;AN=12;AO=38;CIGAR=1X;DP=448;DPB=448;DPRA=0.909091;EPP=85.5263;EPPR=893.314;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.94878;PAO=0;PQA=0;PQR=0;PRO=0;QA=1499;QR=16066;RO=410;RPL=0;RPP=85.5263;RPPR=893.314;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=410;SRP=893.314;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:80:80,0:80:3165:0:0:0,-24.0824,-284.933 0/0:94:94,0:94:3676:0:0:0,-28.2968,-330.876 0/0:69:69,0:69:2685:0:0:0,-20.7711,-241.784 0/0:65:65,0:65:2550:0:0:0,-19.5669,-229.638 0/1:71:45,26:45:1735:26:1024:-71.0796,0,-134.994 0/1:69:57,12:57:2255:12:475:-22.327,0,-182.359 dDocent_Contig_6212 34 . C A 47697.7 . AB=0.680766;ABP=640.476;AC=6;AF=0.5;AN=12;AO=1529;CIGAR=1X4M;DP=2246;DPB=2245.8;DPRA=0;EPP=3323.19;EPPR=1486.13;GTI=0;LEN=1;MEANALT=3.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.996076;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=60583;QR=26990;RO=683;RPL=0;RPP=3323.19;RPPR=1486.13;RPR=1529;RUN=1;SAF=1529;SAP=3323.19;SAR=0;SRF=683;SRP=1486.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:446:153,0,289:153:6023:0,289:0,11457:-896.968,-943.026,-1438.47,0,-495.483,-408.485 0|1:584:200,1,378:200:7916:1,378:36,14964:-1171.28,-1228.55,-1879.73,0,-648.569,-537.717 0|1:540:150,0,386:150:5925:0,386:0,15284:-1212.71,-1257.87,-1745.4,0,-487.569,-371.372 0|1:286:101,0,184:101:3997:0,184:0,7315:-571.808,-602.212,-931.157,0,-328.941,-273.552 0|1:281:56,18,206:56:2227:18,206:704,8172:-655.791,-614.771,-792.712,0,-125.489,-121.353 0|1:109:23,0,86:23:902:0,86:0,3391:-272.432,-279.356,-353.529,0,-74.565,-48.6764 dDocent_Contig_6213 9 . T A 1647.61 . AB=0.254237;ABP=157.774;AC=2;AF=0.166667;AN=12;AO=76;CIGAR=1X;DP=684;DPB=684;DPRA=1.19231;EPP=168.042;EPPR=1323.27;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.998355;PAO=0;PQA=0;PQR=0;PRO=0;QA=2886;QR=23248;RO=608;RPL=0;RPP=168.042;RPPR=1323.27;RPR=76;RUN=1;SAF=76;SAP=168.042;SAR=0;SRF=608;SRP=1323.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:77:76,1:76:2882:1:39:0,-19.2827,-255.663 0/0:83:83,0:83:3174:0:0:0,-24.9855,-285.816 0/0:154:154,0:154:5934:0:0:0,-46.3586,-534.004 0/0:75:75,0:75:2868:0:0:0,-22.5772,-258.296 0/1:174:128,46:128:4885:46:1731:-103.665,0,-387.302 0/1:121:92,29:92:3505:29:1116:-64.3175,0,-279.154 dDocent_Contig_6214 183 . A T 287.183 . AB=0.155738;ABP=128.6;AC=2;AF=0.166667;AN=12;AO=19;CIGAR=1X;DP=356;DPB=356;DPRA=1.04274;EPP=44.2683;EPPR=734.797;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=755;QR=13164;RO=337;RPL=19;RPP=44.2683;RPPR=734.797;RPR=0;RUN=1;SAF=0;SAP=44.2683;SAR=19;SRF=0;SRP=734.797;SRR=337;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:45:45,0:45:1775:0:0:0,-13.5463,-159.955 0/0:25:25,0:25:951:0:0:0,-7.52575,-85.8754 0/1:69:56,13:56:2234:13:518:-26.1926,0,-180.455 0/1:53:47,6:47:1889:6:237:-5.74759,0,-154.249 0/0:84:84,0:84:3184:0:0:0,-25.2865,-286.633 0/0:80:80,0:80:3131:0:0:0,-24.0824,-281.866 dDocent_Contig_6215 27 . G T 1097.41 . AB=0.275862;ABP=78.937;AC=6;AF=0.5;AN=12;AO=48;CIGAR=1X;DP=174;DPB=174;DPRA=0;EPP=107.241;EPPR=274.444;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.770833;PAIREDR=0.752;PAO=0;PQA=0;PQR=0;PRO=0;QA=1903;QR=4968;RO=125;RPL=0;RPP=107.241;RPPR=274.444;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=125;SRP=274.444;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:25,5:25:1012:5:194:-8.79961,0,-82.3436 0/1:32:27,5:27:1050:5:204:-9.11107,0,-85.1506 0/1:23:16,7:16:640:7:282:-18.8278,0,-51.0078 0/1:31:18,13:18:714:13:527:-38.4437,0,-55.254 0/1:36:28,8:28:1116:8:309:-17.3298,0,-89.887 0/1:22:11,10:11:436:10:387:-28.4508,0,-32.8627 dDocent_Contig_6216 1 . N G 748.981 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=25;CIGAR=1X;DP=25;DPB=25;DPRA=0;EPP=57.2971;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=808;QR=0;RO=0;RPL=0;RPP=57.2971;RPPR=0;RPR=25;RUN=1;SAF=0;SAP=57.2971;SAR=25;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:7:0,7:0:0:7:238:-21.7529,-2.10721,0 1/1:1:0,1:0:0:1:18:-1.79997,-0.30103,0 1/1:7:0,7:0:0:7:221:-20.2008,-2.10721,0 1/1:6:0,6:0:0:6:198:-18.1448,-1.80618,0 ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:133:-12.2988,-1.20412,0 dDocent_Contig_6217 23 . A T 758.792 . AB=0.144414;ABP=406.07;AC=2;AF=0.166667;AN=12;AO=64;CIGAR=1X;DP=1045;DPB=1045;DPRA=0.850129;EPP=141.985;EPPR=2133.22;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.984375;PAIREDR=0.989806;PAO=0;PQA=0;PQR=0;PRO=0;QA=2543;QR=38755;RO=981;RPL=0;RPP=141.985;RPPR=2133.22;RPR=64;RUN=1;SAF=64;SAP=141.985;SAR=0;SRF=981;SRP=2133.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:176:150,26:150:5838:26:1032:-40.194,0,-472.259 0/1:191:164,27:164:6559:27:1068:-38.907,0,-532.533 0/0:135:129,6:129:5047:6:243:0,-18.3911,-431.884 0/0:156:151,5:151:6001:5:200:0,-28.581,-521.498 0/0:183:183,0:183:7264:0:0:0,-55.0885,-653.418 0/0:204:204,0:204:8046:0:0:0,-61.4101,-723.716 dDocent_Contig_6218 24 . A T 387.464 . AB=0.102521;ABP=819.517;AC=1;AF=0.0833333;AN=12;AO=170;CIGAR=1X;DP=4272;DPB=4272;DPRA=0.971074;EPP=372.161;EPPR=8908.22;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.931236;PAO=0;PQA=0;PQR=0;PRO=0;QA=6794;QR=162995;RO=4101;RPL=0;RPP=372.161;RPPR=8908.22;RPR=170;RUN=1;SAF=170;SAP=372.161;SAR=0;SRF=4101;SRP=8908.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:524:519,5:519:20481:5:204:0,-138.996,-1822.89 0/0:742:715,27:715:28482:27:1068:0,-126.954,-2464.43 0/0:666:666,0:666:26599:0:0:0,-200.486,-2391.5 0/1:595:534,61:534:21231:61:2436:-40.2693,0,-1729.9 0/0:959:882,77:882:35027:77:3086:0,-10.8846,-2871.42 0/0:786:785,0:785:31175:0:0:0,-236.309,-2802.54 dDocent_Contig_6219 31 . T A 685.814 . AB=0.266667;ABP=52.6646;AC=1;AF=0.0833333;AN=12;AO=28;CIGAR=1X;DP=857;DPB=857;DPRA=0.698138;EPP=63.8115;EPPR=1803.16;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1127;QR=33179;RO=829;RPL=0;RPP=63.8115;RPPR=1803.16;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=829;SRP=1803.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:129:129,0:129:5156:0:0:0,-38.8329,-463.9 0/0:226:226,0:226:9069:0:0:0,-68.0328,-815.63 0/0:142:142,0:142:5642:0:0:0,-42.7463,-507.59 0/0:177:177,0:177:7103:0:0:0,-53.2823,-638.92 0/1:105:77,28:77:3088:28:1127:-70.1043,0,-246.385 0/0:78:78,0:78:3121:0:0:0,-23.4803,-280.952 dDocent_Contig_6220 48 . G A 46.6832 . AB=0.105263;ABP=131.584;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=321;DPB=321;DPRA=1.07353;EPP=39.9253;EPPR=637.337;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996711;PAO=0;PQA=0;PQR=0;PRO=0;QA=680;QR=11844;RO=304;RPL=0;RPP=39.9253;RPPR=637.337;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=304;SRP=663.138;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:29,4:29:1099:4:158:-4.66467,0,-89.2589 0/1:62:56,6:56:2203:6:239:-3.22094,0,-179.781 0/0:47:46,1:46:1785:1:41:0,-10.0538,-156.779 0/0:77:71,6:71:2756:6:242:0,-1.02178,-226.012 0/0:67:67,0:67:2620:0:0:0,-20.169,-235.942 0/0:35:35,0:35:1381:0:0:0,-10.536,-124.55 dDocent_Contig_6221 13 . T A 848.77 . AB=0.116248;ABP=971.312;AC=4;AF=0.333333;AN=12;AO=93;CIGAR=1X;DP=1038;DPB=1038;DPRA=1.70459;EPP=204.957;EPPR=2055.05;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.989247;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3734;QR=37990;RO=945;RPL=0;RPP=204.957;RPPR=2055.05;RPR=93;RUN=1;SAF=93;SAP=204.957;SAR=0;SRF=945;SRP=2055.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:109:109,0:109:4364:0:0:0,-32.8123,-392.685 0/1:220:187,33:187:7525:33:1322:-53.0149,0,-610.604 0/1:81:69,12:69:2744:12:478:-18.9855,0,-222.681 0/0:172:167,5:167:6711:5:201:0,-33.3061,-585.19 0/1:223:204,19:204:8222:19:756:-1.23374,0,-672.36 0/1:233:209,24:209:8424:24:977:-18.0862,0,-687.494 dDocent_Contig_6222 1 . N G 836.273 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=25;CIGAR=1X;DP=25;DPB=25;DPRA=0;EPP=13.5202;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=907;QR=0;RO=0;RPL=0;RPP=57.2971;RPPR=0;RPR=25;RUN=1;SAF=7;SAP=13.5202;SAR=18;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:6:0,6:0:0:6:204:-18.6925,-1.80618,0 1/1:2:0,2:0:0:2:70:-6.64733,-0.60206,0 1/1:2:0,2:0:0:2:77:-7.30883,-0.60206,0 1/1:15:0,15:0:0:15:556:-50.376,-4.51545,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6223 14 . G C 1884.16 . AB=0.150617;ABP=861.83;AC=3;AF=0.25;AN=12;AO=166;CIGAR=1X;DP=1660;DPB=1660;DPRA=0;EPP=363.475;EPPR=3245.02;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.993976;PAIREDR=0.99933;PAO=0;PQA=0;PQR=0;PRO=0;QA=6601;QR=59495;RO=1493;RPL=0;RPP=363.475;RPPR=3245.02;RPR=166;RUN=1;SAF=166;SAP=363.475;SAR=0;SRF=1493;SRP=3245.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:281:275,6:275:10981:6:241:0,-62.523,-965.485 0/0:361:330,30:330:13164:30:1189:0,-1.48054,-1076.52 0/1:184:165,19:165:6553:19:766:-13.8714,0,-534.104 0/0:208:200,8:200:7967:8:318:0,-33.6285,-687.612 0/1:342:310,32:310:12346:32:1274:-11.9744,0,-1007.31 0/1:284:213,71:213:8484:71:2813:-167.792,0,-677.588 dDocent_Contig_6224 10 . T A 34.649 . AB=0.108696;ABP=64.1892;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=248;DPB=248;DPRA=0.987952;EPP=16.0391;EPPR=528.507;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=246;QR=9662;RO=242;RPL=0;RPP=16.0391;RPPR=528.507;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=242;SRP=528.507;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:35,1:35:1406:1:41:0,-6.74251,-122.696 0/0:71:71,0:71:2830:0:0:0,-21.3731,-254.8 0/1:46:41,5:41:1645:5:205:-4.98763,0,-134.431 0/0:29:29,0:29:1168:0:0:0,-8.72987,-105.399 0/0:24:24,0:24:928:0:0:0,-7.22472,-83.8224 0/0:42:42,0:42:1685:0:0:0,-12.6433,-151.874 dDocent_Contig_6225 107 . N A 3259.27 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=110;CIGAR=1X;DP=110;DPB=110;DPRA=0;EPP=241.872;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3612;QR=0;RO=0;RPL=0;RPP=241.872;RPPR=0;RPR=110;RUN=1;SAF=0;SAP=241.872;SAR=110;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:71:0,71:0:0:71:2275:-204.998,-21.3731,0 1/1:39:0,39:0:0:39:1337:-120.628,-11.7402,0 dDocent_Contig_6226 50 . T G 8100.57 . AB=0.247191;ABP=793.524;AC=6;AF=0.5;AN=12;AO=352;CIGAR=1X;DP=1424;DPB=1424;DPRA=0;EPP=767.369;EPPR=2313.46;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997159;PAIREDR=0.991541;PAO=0;PQA=0;PQR=0;PRO=0;QA=13864;QR=42332;RO=1064;RPL=352;RPP=767.369;RPPR=2313.46;RPR=0;RUN=1;SAF=352;SAP=767.369;SAR=0;SRF=1064;SRP=2313.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:229:190,38:190:7540:38:1524:-68.3586,0,-609.179 0/1:302:220,82:220:8738:82:3161:-193.668,0,-695.012 0/1:170:135,31:135:5424:31:1237:-61.23,0,-437.609 0/1:203:120,80:120:4727:80:3196:-227.098,0,-364.741 0/1:272:216,56:216:8590:56:2174:-113.966,0,-690.725 0/1:248:183,65:183:7313:65:2572:-156.958,0,-583.142 dDocent_Contig_6227 107 . N T 351.784 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=11;CIGAR=1X;DP=11;DPB=11;DPRA=0;EPP=26.8965;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=373;QR=0;RO=0;RPL=0;RPP=26.8965;RPPR=0;RPR=11;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:134:-12.3913,-1.20412,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:6:0,6:0:0:6:205:-18.7854,-1.80618,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6228 22 . A C 84.1067 . AB=0.10303;ABP=228.857;AC=3;AF=0.25;AN=12;AO=22;CIGAR=1X;DP=354;DPB=354;DPRA=0.623256;EPP=50.7827;EPPR=721.768;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.863636;PAIREDR=0.996979;PAO=0;PQA=0;PQR=0;PRO=0;QA=887;QR=13169;RO=331;RPL=0;RPP=50.7827;RPPR=721.768;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=331;SRP=721.768;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:42:39,3:39:1551:3:122:0,-1.27077,-128.458 0/0:61:58,2:58:2295:2:81:0,-10.5776,-199.12 0/1:58:53,5:53:2123:5:204:-1.28429,0,-173.791 0/1:42:38,4:38:1506:4:157:-1.86316,0,-123.14 0/1:65:57,8:57:2272:8:323:-9.87143,0,-185.08 0/0:86:86,0:86:3422:0:0:0,-25.8886,-308.027 dDocent_Contig_6229 7 . A C 143.401 . AB=0.115385;ABP=203.454;AC=1;AF=0.0833333;AN=12;AO=48;CIGAR=1X;DP=1184;DPB=1184;DPRA=0.82069;EPP=107.241;EPPR=2458.95;GTI=0;LEN=1;MEANALT=1.6;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1825;QR=42907;RO=1131;RPL=0;RPP=107.241;RPPR=2458.95;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=1131;SRP=2458.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:156:138,18:138:5216:18:691:-15.562,0,-422.491 0/0:174:172,1:172:6530:1:39:0,-48.5613,-583.737 0/0:273:259,13:259:9843:13:481:0,-38.5594,-841.938 0/0:161:160,1:160:6060:1:39:0,-44.5693,-541.46 0/0:188:171,15:171:6508:15:575:0,-4.03337,-533.581 0/0:232:231,0:231:8750:0:0:0,-69.5379,-787.164 dDocent_Contig_6230 32 . C T 43.864 . AB=0.132075;ABP=65.3275;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=2X;DP=310;DPB=310;DPRA=0.422018;EPP=20.3821;EPPR=656.623;GTI=0;LEN=1;MEANALT=1;MQM=38;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0;PAIREDR=0.996678;PAO=0;PQA=0;PQR=0;PRO=0;QA=309;QR=11602;RO=301;RPL=0;RPP=20.3821;RPPR=656.623;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=301;SRP=656.623;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:20:20,0:20:773:0:0:0,-6.0206,-69.895 0|1:41:37,4:37:1436:4:158:-0.855139,0,-117.167 0|0:39:38,1:38:1467:1:40:0,-8.15259,-128.697 0|1:12:9,3:9:358:3:111:-5.90411,0,-28.9716 0|0:96:95,0:95:3635:0:0:0,-28.5978,-326.87 0|0:102:102,0:102:3933:0:0:0,-30.7051,-354.027 dDocent_Contig_6231 123 . A T 9786.92 . AB=0.320082;ABP=413.231;AC=5;AF=0.416667;AN=12;AO=504;CIGAR=1X;DP=1998;DPB=1998;DPRA=0;EPP=1097.43;EPPR=3242.85;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=17103;QR=50520;RO=1492;RPL=0;RPP=1097.43;RPPR=3242.85;RPR=504;RUN=1;SAF=0;SAP=1097.43;SAR=504;SRF=0;SRP=3242.85;SRR=1492;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:248:177,71:177:5907:71:2450:-146.109,0,-457.123 0/1:318:228,90:228:7751:90:3029:-177.123,0,-601.951 0/1:318:190,126:190:6445:126:4286:-290.631,0,-484.87 0/1:380:247,133:247:8352:133:4479:-288.913,0,-637.362 0/0:539:502,37:502:17060:37:1264:0,-48.194,-1421.13 0/1:195:148,47:148:5005:47:1595:-85.1383,0,-391.925 dDocent_Contig_6232 87 . C G 290.403 . AB=0.164557;ABP=157.432;AC=3;AF=0.25;AN=12;AO=31;CIGAR=1X;DP=277;DPB=277;DPRA=1.11905;EPP=70.3259;EPPR=537.193;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.774194;PAIREDR=0.695122;PAO=0;PQA=0;PQR=0;PRO=0;QA=1072;QR=8715;RO=246;RPL=31;RPP=70.3259;RPPR=537.193;RPR=0;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=246;SRP=537.193;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:49:43,6:43:1511:6:204:-3.94293,0,-121.532 0/1:48:38,10:38:1353:10:347:-17.1158,0,-107.621 0/0:43:41,2:41:1451:2:70:0,-6.29689,-124.239 0/1:61:51,10:51:1800:10:347:-13.2024,0,-143.918 0/0:42:42,0:42:1500:0:0:0,-12.6433,-135.295 0/0:34:31,3:31:1100:3:104:0,-0.531928,-89.6075 dDocent_Contig_6233 19 . G A 288.414 . AB=0.152672;ABP=140.277;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=819;DPB=819;DPRA=0.952035;EPP=46.4397;EPPR=1738.02;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.95;PAIREDR=0.972466;PAO=0;PQA=0;PQR=0;PRO=0;QA=772;QR=31567;RO=799;RPL=0;RPP=46.4397;RPPR=1738.02;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=799;SRP=1738.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:120:120,0:120:4662:0:0:0,-36.1236,-419.522 0/0:186:186,0:186:7406:0:0:0,-55.9916,-666.182 0/0:91:91,0:91:3618:0:0:0,-27.3937,-325.644 0/1:131:111,20:111:4371:20:772:-30.3643,0,-353.895 0/0:147:147,0:147:5760:0:0:0,-44.2514,-518.198 0/0:144:144,0:144:5750:0:0:0,-43.3483,-517.295 dDocent_Contig_6234 98 . N A 1472.4 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=47;CIGAR=2M1X2I4X;DP=58;DPB=74.2857;DPRA=0;EPP=105.07;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.93617;PAIREDR=0;PAO=9.5;PQA=303.5;PQR=303.5;PRO=9.5;QA=1617;QR=0;RO=0;RPL=47;RPP=105.07;RPPR=0;RPR=0;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:3:0,3:0:0:3:105:-9.75746,-0.90309,0 1|1:2:0,2:0:0:2:68:-6.15719,-0.60206,0 1|1:4:0,4:0:0:4:129:-11.7034,-1.20412,0 1|1:11:0,11:0:0:11:381:-34.4595,-3.31133,0 1|1:19:0,19:0:0:19:656:-59.3637,-5.71957,0 1|1:19:0,8:0:0:8:278:-25.0207,-2.40824,0 dDocent_Contig_6235 13 . A T 387.903 . AB=0.123596;ABP=112.535;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=2X;DP=544;DPB=544;DPRA=1.01613;EPP=44.2683;EPPR=945.908;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=59.2974;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.980176;PAO=0;PQA=0;PQR=0;PRO=0;QA=684;QR=17784;RO=454;RPL=0;RPP=44.2683;RPPR=988.859;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=449;SRP=945.908;SRR=5;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:116:91,0,8,17:91:3572:0,8,17:0,325,663:-27.0851,-54.4788,-348.231,-27.6682,-321.425,-319.016,0,-293.742,-266.935,-288.624 0|0:100:86,0,3,9:86:3382:0,3,9:0,118,338:-1.7921,-27.6807,-303.882,-17.9703,-294.176,-293.273,0,-276.202,-266.497,-273.493 0|0:46:38,0,5,3:38:1499:0,5,3:0,204,120:-5.39721,-16.8363,-140.153,0,-123.32,-121.815,-6.95407,-130.267,-113.434,-129.364 0|0:93:81,0,4,7:81:3198:0,4,7:0,164,280:0,-24.3834,-287.51,-10.8438,-273.973,-272.769,-1.32326,-264.445,-250.908,-262.337 0|1:89:70,11,4,4:70:2714:11,4,4:399,160,157:-11.4871,0,-219.628,-19.3729,-209.759,-241.13,-19.6425,-210.027,-229.421,-241.398 0|0:100:88,8,0,4:88:3419:8,0,4:285,0,163:0,-3.29874,-269.035,-26.4906,-271.443,-294.668,-13.0263,-257.994,-281.219,-280.015 dDocent_Contig_6236 31 . A T 40.6612 . AB=0.0913462;ABP=304.72;AC=1;AF=0.0833333;AN=12;AO=42;CIGAR=1X;DP=1557;DPB=1557;DPRA=1.06012;EPP=94.2121;EPPR=3292.79;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.986139;PAO=0;PQA=0;PQR=0;PRO=0;QA=1663;QR=59843;RO=1515;RPL=0;RPP=94.2121;RPPR=3292.79;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=1515;SRP=3292.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:208:189,19:189:7457:19:751:-5.28793,0,-608.169 0/0:222:213,9:213:8430:9:352:0,-34.7885,-726.213 0/0:415:410,5:410:16150:5:202:0,-106.365,-1433.74 0/0:213:204,9:204:8039:9:358:0,-31.5387,-690.51 0/0:271:271,0:271:10733:0:0:0,-81.5791,-965.288 0/0:228:228,0:228:9034:0:0:0,-68.6348,-812.548 dDocent_Contig_6237 15 . C T 38.0374 . AB=0.109091;ABP=76.0113;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=246;DPB=246;DPRA=1.43979;EPP=16.0391;EPPR=524.164;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.483333;PAO=0;PQA=0;PQR=0;PRO=0;QA=239;QR=9672;RO=240;RPL=0;RPP=16.0391;RPPR=524.164;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=240;SRP=524.164;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1085:0:0:0,-8.12781,-97.9332 0/0:66:66,0:66:2676:0:0:0,-19.868,-240.949 0/0:25:25,0:25:1007:0:0:0,-7.52575,-90.9228 0/1:55:49,6:49:1981:6:239:-5.32655,0,-161.917 0/0:41:41,0:41:1645:0:0:0,-12.3422,-148.273 0/0:32:32,0:32:1278:0:0:0,-9.63296,-115.287 dDocent_Contig_6238 98 . N T 75.0174 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=75;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6239 45 . A G 102.517 . AB=0.15873;ABP=66.7413;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=358;DPB=358;DPRA=1.0678;EPP=24.725;EPPR=758.683;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997126;PAO=0;PQA=0;PQR=0;PRO=0;QA=338;QR=12959;RO=348;RPL=0;RPP=24.725;RPPR=758.683;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=348;SRP=758.683;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:103:103,0:103:3853:0:0:0,-31.0061,-346.885 0/1:63:53,10:53:1986:10:338:-11.7746,0,-160.013 0/0:108:108,0:108:3989:0:0:0,-32.5112,-359.117 0/0:61:61,0:61:2255:0:0:0,-18.3628,-203.173 0/0:18:18,0:18:681:0:0:0,-5.41854,-61.6226 0/0:5:5,0:5:195:0:0:0,-1.50515,-17.924 dDocent_Contig_6240 107 . N C 63.6413 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=67;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:67:-6.36304,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6241 37 . G T 373.31 . AB=0.140187;ABP=123.334;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X2M1X;DP=153;DPB=153;DPRA=0.933333;EPP=37.7539;EPPR=267.93;GTI=0;LEN=1;MEANALT=1.8;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.991803;PAO=0;PQA=0;PQR=0;PRO=0;QA=623;QR=4740;RO=122;RPL=0;RPP=37.7539;RPPR=267.93;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=122;SRP=267.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:27:27,0,0:27:1057:0,0:0,0:0,-8.12781,-95.4323,-8.12781,-95.4323,-95.4323 0|0:18:9,4,5:9:355:4,5:159,192:-13.0411,-2.65326,-30.6651,0,-16.1151,-27.702 0|0:19:18,1,0:18:694:1,0:40,0:0,-1.72389,-58.796,-5.41854,-59.097,-62.3929 0|0:12:9,1,2:9:354:1,2:32,79:-3.8411,-3.9969,-32.8149,0,-26.615,-28.584 0|1:32:22,8,2:22:841:8,2:314,76:-19.2111,0,-66.5961,-19.6045,-62.7727,-87.9972 0|0:45:37,2,6:37:1439:2,6:78,238:-8.45827,-13.1864,-130.828,0,-111.837,-116.443 dDocent_Contig_6242 13 . A T 139.471 . AB=0.25;ABP=16.0391;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X1M1X;DP=195;DPB=195;DPRA=0.727273;EPP=16.0391;EPPR=400.39;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.833333;PAIREDR=0.726776;PAO=0;PQA=0;PQR=0;PRO=0;QA=237;QR=7238;RO=183;RPL=0;RPP=16.0391;RPPR=400.39;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=183;SRP=400.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:41:40,0,1:40:1593:0,1:0,39:0,-12.0412,-143.22,-8.44566,-140.014,-139.713 0|0:29:29,0,0:29:1153:0,0:0,0:0,-8.72987,-104.055,-8.72987,-104.055,-104.055 0|0:26:25,0,0:25:974:0,0:0,0:0,-7.52575,-87.5491,-7.52575,-87.5491,-87.5491 0|0:39:35,0,4:35:1379:0,4:0,156:-2.67554,-13.2116,-126.664,0,-113.842,-112.638 0|1:24:18,6,0:18:711:6,0:237,0:-14.4784,0,-57.0924,-19.897,-58.8986,-78.4009 0|0:36:36,0,0:36:1428:0,0:0,0:0,-10.8371,-128.78,-10.8371,-128.78,-128.78 dDocent_Contig_6243 21 . G A 45.6276 . AB=0.0858779;ABP=783.563;AC=1;AF=0.0833333;AN=12;AO=45;CIGAR=1X;DP=3896;DPB=3896;DPRA=0.776987;EPP=100.727;EPPR=8363.18;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9997;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.85039;PAO=0;PQA=0;PQR=0;PRO=0;QA=1818;QR=152597;RO=3850;RPL=0;RPP=100.727;RPPR=8363.18;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=3850;SRP=8363.18;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:815:815,0:815:32188:0:0:0,-245.339,-2894.09 0/0:1033:1033,0:1033:41130:0:0:0,-310.964,-3697.85 0/0:365:364,0:364:14439:0:0:0,-109.575,-1298.04 0/0:597:597,0:597:23547:0:0:0,-179.715,-2117.28 0/1:524:479,45:479:18924:45:1818:-6.08563,0,-1543.92 0/0:562:562,0:562:22369:0:0:0,-169.179,-2011.3 dDocent_Contig_6244 98 . N C 327.851 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=11;CIGAR=1X;DP=11;DPB=11;DPRA=0;EPP=26.8965;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=349;QR=0;RO=0;RPL=11;RPP=26.8965;RPPR=0;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:5:0,5:0:0:5:165:-15.1755,-1.50515,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:137:-12.6682,-1.20412,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:47:-4.46369,-0.60206,0 dDocent_Contig_6245 11 . G C 6192.7 . AB=0.220939;ABP=881.671;AC=4;AF=0.333333;AN=12;AO=287;CIGAR=1X1M1X;DP=1983;DPB=1983;DPRA=0.949561;EPP=626.223;EPPR=3672.8;GTI=0;LEN=1;MEANALT=2.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995266;PAO=0;PQA=0;PQR=0;PRO=0;QA=11293;QR=66406;RO=1690;RPL=0;RPP=626.223;RPPR=3672.8;RPR=287;RUN=1;SAF=287;SAP=626.223;SAR=0;SRF=1690;SRP=3672.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:404:351,51:351:13801:51:2009:-59.6043,0,-1119.82 0|1:358:285,70:285:11133:70:2787:-143.709,0,-894.116 0|1:194:94,100:94:3676:100:3925:-294.87,0,-272.503 0|1:343:276,66:276:10842:66:2572:-128.309,0,-871.856 0|0:344:344,0:344:13558:0:0:0,-103.554,-1219.35 0|0:340:340,0:340:13396:0:0:0,-102.35,-1204.79 dDocent_Contig_6246 1 . N G 72.1462 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=3.0103;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0.5;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=76;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=1;SAP=3.0103;SAR=1;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:76:-7.21354,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6247 14 . G A 864.248 . AB=0.166113;ABP=294.471;AC=3;AF=0.25;AN=12;AO=59;CIGAR=1X;DP=486;DPB=486;DPRA=1.53571;EPP=131.127;EPPR=930.229;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995316;PAO=0;PQA=0;PQR=0;PRO=0;QA=2373;QR=17050;RO=427;RPL=0;RPP=131.127;RPPR=930.229;RPR=59;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=427;SRP=930.229;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:92:83,9:83:3292:9:364:-5.42912,0,-268.647 0/1:114:87,27:87:3471:27:1084:-63.5321,0,-278.111 0/0:100:93,7:93:3748:7:277:0,-4.80416,-312.019 0/1:95:81,14:81:3248:14:566:-22.6853,0,-263.783 0/0:56:56,0:56:2193:0:0:0,-16.8577,-197.535 0/0:29:27,2:27:1098:2:82:0,-0.950192,-91.3229 dDocent_Contig_6248 98 . N A 198.544 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=206;QR=0;RO=0;RPL=8;RPP=20.3821;RPPR=0;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:23:-2.29991,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:143:-13.1519,-1.50515,0 1/1:2:0,2:0:0:2:40:-3.79918,-0.60206,0 dDocent_Contig_6249 42 . C G 1956.71 . AB=0.507576;ABP=3.0761;AC=1;AF=0.0833333;AN=12;AO=87;CIGAR=1X;DP=756;DPB=756;DPRA=1.25;EPP=191.928;EPPR=1455.73;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3439;QR=26551;RO=669;RPL=0;RPP=191.928;RPPR=1455.73;RPR=87;RUN=1;SAF=87;SAP=191.928;SAR=0;SRF=669;SRP=1455.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:145:135,10:135:5347:10:401:0,-7.19946,-444.622 0/0:143:133,10:133:5254:10:407:0,-6.05669,-435.733 0/1:132:65,67:65:2579:67:2631:-197.194,0,-192.495 0/0:108:108,0:108:4284:0:0:0,-32.5112,-385.528 0/0:161:161,0:161:6403:0:0:0,-48.4658,-576.003 0/0:67:67,0:67:2684:0:0:0,-20.169,-241.678 dDocent_Contig_6250 10 . T A 1352.88 . AB=0.152632;ABP=600.417;AC=1;AF=0.0833333;AN=12;AO=91;CIGAR=1X;DP=2987;DPB=2987;DPRA=1.20838;EPP=200.614;EPPR=6291.59;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999655;PAO=0;PQA=0;PQR=0;PRO=0;QA=3573;QR=114833;RO=2896;RPL=0;RPP=200.614;RPPR=6291.59;RPR=91;RUN=1;SAF=91;SAP=200.614;SAR=0;SRF=2896;SRP=6291.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:441:441,0:441:17421:0:0:0,-132.754,-1566.55 0/0:555:551,4:551:21922:4:147:0,-153.486,-1957.56 0/0:361:361,0:361:14369:0:0:0,-108.672,-1292.16 0/0:457:457,0:457:18178:0:0:0,-137.571,-1634.57 0/0:603:603,0:603:23831:0:0:0,-181.521,-2142.83 0/1:570:483,87:483:19112:87:3426:-136.811,0,-1546.99 dDocent_Contig_6251 20 . A T 6986.79 . AB=0.313239;ABP=259.316;AC=4;AF=0.333333;AN=12;AO=275;CIGAR=1X;DP=1214;DPB=1214;DPRA=0;EPP=600.165;EPPR=2039.85;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.9891;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995736;PAO=0;PQA=0;PQR=0;PRO=0;QA=11052;QR=37557;RO=938;RPL=0;RPP=600.165;RPPR=2039.85;RPR=275;RUN=1;SAF=275;SAP=600.165;SAR=0;SRF=938;SRP=2039.85;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:193:110,83:110:4378:83:3349:-243.348,0,-335.872 0/1:267:193,73:193:7730:73:2935:-184.047,0,-615.108 0/1:214:157,57:157:6314:57:2289:-141.737,0,-503.562 0/1:172:120,52:120:4806:52:2093:-136.769,0,-380.653 0/0:197:193,4:193:7753:4:164:0,-44.153,-682.195 0/0:171:165,6:165:6576:6:222:0,-31.1454,-571.228 dDocent_Contig_6252 31 . C A 971.8 . AB=0.125676;ABP=903.631;AC=1;AF=0.0833333;AN=12;AO=219;CIGAR=1M1D1M1X2M3I1X;DP=5224;DPB=5286.57;DPRA=0;EPP=478.563;EPPR=10780;GTI=0;LEN=1;MEANALT=6.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999396;PAO=0;PQA=0;PQR=0;PRO=0;QA=8383;QR=189788;RO=4963;RPL=0;RPP=478.563;RPPR=10780;RPR=219;RUN=1;SAF=219;SAP=478.563;SAR=0;SRF=4963;SRP=10780;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:798:759,37:759:28895:37:1423:0,-111.537,-2470.42 0|0:881:846,29:846:32278:29:1090:0,-165.397,-2804.57 0|1:740:639,93:639:24516:93:3547:-98.7029,0,-1984.28 0|0:868:849,11:849:32426:11:428:0,-220.319,-2877.45 0|0:1047:990,47:990:37809:47:1822:0,-148.171,-3236.18 0|0:890:880,2:880:33864:2:73:0,-258.925,-3038.67 dDocent_Contig_6253 36 . T A 222.805 . AB=0.184615;ABP=59.1679;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=460;DPB=460;DPRA=1.51366;EPP=42.0968;EPPR=962.801;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995475;PAO=0;PQA=0;PQR=0;PRO=0;QA=707;QR=16919;RO=442;RPL=0;RPP=42.0968;RPPR=962.801;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=442;SRP=962.801;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:51:51,0:51:1913:0:0:0,-15.3525,-172.405 0/0:70:70,0:70:2690:0:0:0,-21.0721,-242.265 0/0:120:118,2:118:4553:2:79:0,-28.6264,-402.281 0/0:62:62,0:62:2348:0:0:0,-18.6639,-211.528 0/1:65:53,12:53:2040:12:478:-23.8034,0,-164.252 0/0:92:88,4:88:3375:4:150:0,-13.8306,-289.986 dDocent_Contig_6254 19 . A G 26808.4 . AB=0.401699;ABP=200.673;AC=6;AF=0.5;AN=12;AO=946;CIGAR=1X;DP=2355;DPB=2355;DPRA=0;EPP=2057.22;EPPR=3060.44;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995028;PAO=0;PQA=0;PQR=0;PRO=0;QA=37807;QR=55774;RO=1408;RPL=0;RPP=2057.22;RPPR=3060.44;RPR=946;RUN=1;SAF=946;SAP=2057.22;SAR=0;SRF=1408;SRP=3060.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:412:301,111:301:11962:111:4406:-272.476,0,-951.745 0/1:386:321,65:321:12719:65:2582:-116.324,0,-1027.66 0/1:210:172,38:172:6847:38:1533:-74.9903,0,-552.714 0/1:352:178,173:178:6998:173:6948:-518.918,0,-523.475 0/1:540:201,339:201:7931:339:13584:-1058.96,0,-550.858 0/1:455:235,220:235:9317:220:8754:-650.391,0,-701.012 dDocent_Contig_6255 20 . A G 171.609 . AB=0.139535;ABP=100.07;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1X;DP=449;DPB=449;DPRA=0.976974;EPP=44.2683;EPPR=936.743;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.944186;PAO=0;PQA=0;PQR=0;PRO=0;QA=771;QR=17111;RO=430;RPL=0;RPP=44.2683;RPPR=936.743;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=430;SRP=936.743;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:86:74,12:74:2908:12:488:-18.3827,0,-235.931 0/0:86:82,4:82:3265:4:161:0,-11.0137,-279.043 0/0:65:65,0:65:2603:0:0:0,-19.5669,-234.394 0/0:62:60,2:60:2390:2:81:0,-10.9781,-207.571 0/0:63:62,1:62:2472:1:41:0,-14.8703,-218.531 0/0:87:87,0:87:3473:0:0:0,-26.1896,-312.609 dDocent_Contig_6256 35 . A G 416.072 . AB=0.119632;ABP=412.686;AC=1;AF=0.0833333;AN=12;AO=77;CIGAR=4M1X3M;DP=2359;DPB=2352.75;DPRA=0.606496;EPP=170.214;EPPR=4804.14;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.980552;PAO=0;PQA=0;PQR=0;PRO=0;QA=3040;QR=86745;RO=2211;RPL=0;RPP=170.214;RPPR=4804.14;RPR=77;RUN=1;SAF=77;SAP=170.214;SAR=0;SRF=2211;SRP=4804.14;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:326:310,0,13:310:12146:0,13:0,510:0,-93.3193,-1092.07,-51.3911,-1050.13,-1046.21 0|1:326:278,5,39:278:10925:5,39:191,1541:-43.1301,-111.146,-1008.22,0,-882.926,-886.857 0|0:263:253,0,9:253:9934:0,9:0,353:0,-76.1606,-893.165,-47.1412,-864.139,-861.429 0|0:314:294,0,15:294:11525:0,15:0,595:0,-88.5028,-1036.25,-39.4647,-987.276,-982.761 0|0:585:577,0,0:577:22670:0,0:0,0:0,-173.694,-2038.35,-173.694,-2038.35,-2038.35 0|0:545:499,44,1:499:19545:44,1:1677,41:0,-12.68,-1606.55,-146.829,-1616.41,-1753.66 dDocent_Contig_6258 7 . A C 546.434 . AB=0.119545;ABP=665.581;AC=1;AF=0.0833333;AN=12;AO=65;CIGAR=1X;DP=3388;DPB=3388;DPRA=1.06606;EPP=144.156;EPPR=7210.13;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2462;QR=126211;RO=3319;RPL=0;RPP=144.156;RPPR=7210.13;RPR=65;RUN=1;SAF=65;SAP=144.156;SAR=0;SRF=3319;SRP=7210.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:563:562,0:562:21344:0:0:0,-169.179,-1919.53 0/0:651:647,2:647:24605:2:78:0,-188.21,-2205.85 0/0:533:533,0:533:20287:0:0:0,-160.449,-1824.79 0/0:616:616,0:616:23457:0:0:0,-185.434,-2109.87 0/0:498:498,0:498:18980:0:0:0,-149.913,-1707.24 0/1:527:463,63:463:17538:63:2384:-56.1663,0,-1418.99 dDocent_Contig_6259 21 . T A 1395.73 . AB=0.289474;ABP=76.1546;AC=1;AF=0.0833333;AN=12;AO=68;CIGAR=1X;DP=1736;DPB=1736;DPRA=0.626992;EPP=150.67;EPPR=3622.85;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2715;QR=65913;RO=1667;RPL=0;RPP=150.67;RPPR=3622.85;RPR=68;RUN=1;SAF=68;SAP=150.67;SAR=0;SRF=1667;SRP=3622.85;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:190:135,55:135:5319:55:2198:-140.795,0,-421.391 0/0:279:273,5:273:10758:5:194:0,-66.246,-949.75 0/0:104:104,0:104:4162:0:0:0,-31.3071,-374.547 0/0:200:192,8:192:7589:8:323:0,-30.7672,-653.232 0/0:559:559,0:559:22076:0:0:0,-168.276,-1985.06 0/0:404:404,0:404:16009:0:0:0,-121.616,-1439.6 dDocent_Contig_6260 12 . A G 766.965 . AB=0.232877;ABP=93.4982;AC=2;AF=0.166667;AN=12;AO=45;CIGAR=1X;DP=425;DPB=425;DPRA=0.980556;EPP=100.727;EPPR=828.17;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.577778;PAIREDR=0.581579;PAO=0;PQA=0;PQR=0;PRO=0;QA=1818;QR=14918;RO=380;RPL=0;RPP=100.727;RPPR=828.17;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=380;SRP=828.17;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:58:57,1:57:2169:1:41:0,-13.3652,-191.292 0/0:72:72,0:72:2825:0:0:0,-21.6742,-254.363 0/0:56:52,4:52:2027:4:163:0,-1.79925,-167.564 0/0:93:87,6:87:3434:6:245:0,-5.56632,-286.685 0/1:61:40,21:40:1604:21:841:-57.639,0,-126.232 0/1:85:72,13:72:2859:13:528:-22.2793,0,-231.832 dDocent_Contig_6261 23 . G A 1796.07 . AB=0.195565;ABP=402.299;AC=3;AF=0.25;AN=12;AO=107;CIGAR=1X;DP=2074;DPB=2074;DPRA=0;EPP=235.358;EPPR=3803.44;GTI=0;LEN=1;MEANALT=1.5;MQM=59.2804;MQMR=59.7821;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0186916;PAIREDR=0.910387;PAO=0;PQA=0;PQR=0;PRO=0;QA=4078;QR=76732;RO=1964;RPL=0;RPP=235.358;RPPR=4267.78;RPR=107;RUN=1;SAF=107;SAP=235.358;SAR=0;SRF=1909;SRP=3803.44;SRR=55;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:83:48,34:48:1855:34:1273:-90.0096,0,-141.283 0/1:220:191,29:191:7355:29:1128:-35.5576,0,-593.98 0/0:348:343,4:343:13353:4:164:0,-89.706,-1183.73 0/1:193:159,34:159:6228:34:1304:-59.2613,0,-500.586 0/0:641:639,1:639:25080:1:38:0,-189.097,-2251.47 0/0:589:584,5:584:22861:5:171:0,-161.586,-2039.89 dDocent_Contig_6262 58 . T C 145.478 . AB=0.176471;ABP=49.3776;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=202;DPB=202;DPRA=0.711864;EPP=26.8965;EPPR=417.762;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.984293;PAO=0;PQA=0;PQR=0;PRO=0;QA=432;QR=7001;RO=191;RPL=11;RPP=26.8965;RPPR=417.762;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=191;SRP=417.762;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:31,2:31:1123:2:81:0,-2.24826,-93.6756 0/0:39:39,0:39:1394:0:0:0,-11.7402,-125.729 0/1:16:10,6:10:381:6:228:-16.0646,0,-29.8276 0/1:35:32,3:32:1156:3:123:-0.928738,0,-93.7982 0/0:45:45,0:45:1674:0:0:0,-13.5463,-150.923 0/0:34:34,0:34:1273:0:0:0,-10.235,-114.861 dDocent_Contig_6263 107 . N T 163.346 . AB=0;ABP=0;AC=4;AF=0.666667;AN=6;AO=6;CIGAR=1X;DP=7;DPB=7;DPRA=3;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=169;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 0/0:1:0,0:0:0:0:0:0,0,0 ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:128:-11.8371,-1.20412,0 1/1:2:0,2:0:0:2:41:-3.89396,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_6264 98 . N G 15446.4 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=548;CIGAR=1X;DP=548;DPB=548;DPRA=0;EPP=1192.98;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=17137;QR=0;RO=0;RPL=548;RPP=1192.98;RPPR=0;RPR=0;RUN=1;SAF=548;SAP=1192.98;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:18:0,18:0:0:18:542:-49.0683,-5.41854,0 1/1:69:0,69:0:0:69:2183:-196.736,-20.7711,0 1/1:24:0,24:0:0:24:743:-67.1626,-7.22472,0 1/1:15:0,15:0:0:15:458:-41.5151,-4.51545,0 1/1:310:0,310:0:0:310:9708:-873.814,-93.3193,0 1/1:112:0,112:0:0:112:3503:-315.503,-33.7154,0 dDocent_Contig_6266 56 . G T 586.765 . AB=0.101;ABP=1385.81;AC=1;AF=0.0833333;AN=12;AO=166;CIGAR=1X;DP=4384;DPB=4384;DPRA=1.28571;EPP=363.475;EPPR=9153.6;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.993976;PAIREDR=0.999288;PAO=0;PQA=0;PQR=0;PRO=0;QA=6581;QR=167365;RO=4214;RPL=166;RPP=363.475;RPPR=9153.6;RPR=0;RUN=1;SAF=166;SAP=363.475;SAR=0;SRF=4214;SRP=9153.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:634:632,0:632:24900:0:0:0,-190.251,-2238.63 0/0:708:707,0:707:28209:0:0:0,-212.828,-2536.12 0/0:576:575,0:575:22843:0:0:0,-173.092,-2053.73 0/0:651:631,20:631:25052:20:801:0,-123.563,-2180.09 0/1:1000:899,101:899:35735:101:4014:-60.1993,0,-2911.85 0/0:815:770,45:770:30626:45:1766:0,-86.1907,-2594.44 dDocent_Contig_6267 23 . T A 114001 . AB=0.283692;ABP=1610.35;AC=6;AF=0.5;AN=12;AO=1122;CIGAR=1X2M1X3M1X3M2X3M1X;DP=3955;DPB=3955;DPRA=0;EPP=2439.4;EPPR=148.499;GTI=0;LEN=1;MEANALT=13.5;MQM=59.9982;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=43518;QR=2628;RO=67;RPL=0;RPP=2439.4;RPPR=148.499;RPR=1122;RUN=1;SAF=1122;SAP=2439.4;SAR=0;SRF=67;SRP=148.499;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:668:12,38,255,3,348:12:474:38,255,3,348:1468,9882,119,13460:-1874.75,-1757.81,-1785.38,-1066.55,-985.004,-1028.79,-1868.57,-1787.02,-1095.76,-1906.67,-772.813,-691.268,0,-802.022,-707.06 1|0:717:22,11,229,54,386:22:859:11,229,54,386:443,8841,2093,14912:-1873.5,-1843.61,-1910.91,-1154.08,-1188.18,-1155.76,-1708.18,-1742.28,-1052.75,-1762.53,-655.422,-689.522,0,-554.093,-609.838 1|0:430:10,23,161,16,216:10:398:23,161,16,216:898,6314,635,8455:-1178.65,-1107.84,-1133.69,-662.418,-621.37,-646.725,-1129.38,-1088.34,-642.916,-1157.34,-486.47,-445.423,0,-466.968,-454.22 1|0:585:9,4,204,11,343:9:354:4,204,11,343:152,7909,435,13359:-1715.88,-1706.13,-1734.04,-1068.84,-1085.5,-1036.55,-1682.79,-1699.45,-1062.16,-1708.6,-620.639,-637.296,0,-613.959,-546.506 1|0:861:9,0,145,7,693:9:357:0,145,7,693:0,5629,278,26869:-2637.74,-2640.44,-2669.83,-2177.95,-2207.34,-2163.69,-2617.56,-2646.94,-2184.45,-2644.84,-433.11,-462.498,0,-439.61,-253.884 1|0:694:5,0,128,0,548:5:186:0,128,0,548:0,4943,0,21203:-2130.81,-2132.32,-2147.54,-1726.38,-1741.6,-1703.06,-2132.32,-2147.54,-1741.6,-2147.54,-390.728,-405.949,0,-405.949,-240.984 dDocent_Contig_6268 25 . A T 284.471 . AB=0.131429;ABP=209.499;AC=1;AF=0.0833333;AN=12;AO=23;CIGAR=1X;DP=1157;DPB=1157;DPRA=0.891039;EPP=52.9542;EPPR=2463.29;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=915;QR=45057;RO=1133;RPL=0;RPP=52.9542;RPPR=2463.29;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=1133;SRP=2463.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:158:158,0:158:6304:0:0:0,-47.5627,-567.112 0/1:175:152,23:152:6066:23:915:-29.97,0,-493.027 0/0:155:154,0:154:6150:0:0:0,-46.3586,-552.848 0/0:208:208,0:208:8228:0:0:0,-62.6142,-740.064 0/0:233:233,0:233:9227:0:0:0,-70.14,-829.875 0/0:228:228,0:228:9082:0:0:0,-68.6348,-816.84 dDocent_Contig_6269 107 . N C 132.217 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=133;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:14:-1.39999,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:84:-7.83861,-0.90309,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_6270 24 . G A 812.378 . AB=0.148825;ABP=413.271;AC=4;AF=0.333333;AN=12;AO=57;CIGAR=1X;DP=458;DPB=458;DPRA=2.55333;EPP=126.784;EPPR=873.771;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.929825;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2249;QR=15965;RO=401;RPL=0;RPP=126.784;RPPR=873.771;RPR=57;RUN=1;SAF=57;SAP=126.784;SAR=0;SRF=401;SRP=873.771;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:78:56,22:56:2225:22:880:-56.0279,0,-176.94 0/1:42:37,5:37:1461:5:193:-5.09546,0,-119.091 0/0:45:45,0:45:1779:0:0:0,-13.5463,-160.324 0/0:30:30,0:30:1190:0:0:0,-9.0309,-107.381 0/1:136:119,17:119:4750:17:654:-18.2397,0,-386.477 0/1:127:114,13:114:4560:13:522:-9.09644,0,-372.097 dDocent_Contig_6272 10 . T A 53.7219 . AB=0.117647;ABP=67.7713;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=332;DPB=332;DPRA=2.25926;EPP=42.0968;EPPR=684.853;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.555556;PAIREDR=0.503185;PAO=0;PQA=0;PQR=0;PRO=0;QA=722;QR=12593;RO=314;RPL=0;RPP=42.0968;RPPR=684.853;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=314;SRP=684.853;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:77:72,5:72:2877:5:203:0,-4.52625,-240.383 0/0:76:74,2:74:2953:2:81:0,-15.1925,-258.179 0/0:27:27,0:27:1087:0:0:0,-8.12781,-98.1132 0/1:51:45,6:45:1819:6:243:-6.89507,0,-148.561 0/0:54:51,3:51:2041:3:123:0,-4.79083,-172.41 0/0:47:45,2:45:1816:2:72:0,-7.31409,-156.813 dDocent_Contig_6273 24 . A C 354.959 . AB=0.182692;ABP=93.9616;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X;DP=311;DPB=311;DPRA=1.10309;EPP=50.7827;EPPR=630.566;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.958478;PAO=0;PQA=0;PQR=0;PRO=0;QA=877;QR=11245;RO=289;RPL=0;RPP=50.7827;RPPR=630.566;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=289;SRP=630.566;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:47:46,1:46:1781:1:41:0,-10.0538,-156.434 0/0:56:56,0:56:2157:0:0:0,-16.8577,-194.331 0/1:36:33,3:33:1288:3:121:-0.442906,0,-105.363 0/0:63:61,2:61:2386:2:80:0,-11.3733,-207.321 0/1:68:52,16:52:2028:16:635:-37.0167,0,-162.263 0/0:41:41,0:41:1605:0:0:0,-12.3422,-144.7 dDocent_Contig_6274 23 . T C 101.206 . AB=0.120482;ABP=106.849;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=603;DPB=603;DPRA=0.817757;EPP=26.8965;EPPR=1288.52;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.984797;PAO=0;PQA=0;PQR=0;PRO=0;QA=421;QR=23697;RO=592;RPL=0;RPP=26.8965;RPPR=1288.52;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=592;SRP=1288.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:92:91,1:91:3663:1:18:0,-25.8948,-327.879 0/0:131:131,0:131:5242:0:0:0,-39.4349,-471.62 0/0:58:58,0:58:2313:0:0:0,-17.4597,-208.324 0/0:102:102,0:102:4092:0:0:0,-30.7051,-368.246 0/0:137:137,0:137:5477:0:0:0,-41.2411,-492.764 0/1:83:73,10:73:2910:10:403:-11.6435,0,-236.997 dDocent_Contig_6275 53 . A T 1532.41 . AB=0.179104;ABP=422.493;AC=3;AF=0.25;AN=12;AO=101;CIGAR=1X;DP=1181;DPB=1181;DPRA=0.7448;EPP=222.329;EPPR=2346.03;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.986098;PAO=0;PQA=0;PQR=0;PRO=0;QA=3970;QR=43053;RO=1079;RPL=101;RPP=222.329;RPPR=2346.03;RPR=0;RUN=1;SAF=101;SAP=222.329;SAR=0;SRF=1079;SRP=2346.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:141:116,25:116:4591:25:971:-45.2333,0,-370.675 0/1:214:171,43:171:6852:43:1709:-89.6129,0,-551.936 0/1:114:98,16:98:3911:16:640:-23.6171,0,-317.664 0/0:241:226,14:226:9010:14:531:0,-24.2353,-762.256 0/0:250:250,0:250:10009:0:0:0,-75.2575,-900.157 0/0:221:218,3:218:8680:3:119:0,-55.4331,-769.608 dDocent_Contig_6276 22 . G T 166.672 . AB=0.137255;ABP=119.589;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=6M1X4M;DP=378;DPB=370.636;DPRA=0.73913;EPP=33.4109;EPPR=743.482;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.714286;PAIREDR=0.815249;PAO=0;PQA=0;PQR=0;PRO=0;QA=554;QR=13354;RO=341;RPL=0;RPP=33.4109;RPPR=743.482;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=341;SRP=743.482;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:72:70,0,0:70:2741:0,0:0,0:0,-21.0721,-246.43,-21.0721,-246.43,-246.43 0|0:89:79,3,0:79:3087:3,0:111,0:0,-14.7041,-267.586,-23.7814,-268.489,-277.568 0|1:46:39,0,7:39:1536:0,7:0,274:-11.1775,-22.9176,-149.271,0,-126.745,-124.638 0|0:72:63,6,0:63:2460:6,0:213,0:0,-1.64087,-202.048,-18.9649,-203.854,-221.203 0|0:43:41,0,0:41:1597:0,0:0,0:0,-12.3422,-143.576,-12.3422,-143.576,-143.576 0|1:56:49,0,7:49:1933:0,7:0,280:-8.71152,-23.462,-182.501,0,-159.438,-157.331 dDocent_Contig_6277 66 . C T 138.17 . AB=0.102679;ABP=310.157;AC=2;AF=0.166667;AN=12;AO=39;CIGAR=1X;DP=739;DPB=739;DPRA=0.855714;EPP=87.6977;EPPR=1523.04;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.97;PAO=0;PQA=0;PQR=0;PRO=0;QA=1534;QR=26702;RO=700;RPL=39;RPP=87.6977;RPPR=1523.04;RPR=0;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=700;SRP=1523.04;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:104:95,9:95:3581:9:345:-0.100822,0,-291.106 0/0:152:141,11:141:5310:11:429:0,-6.79091,-438.943 0/0:101:99,2:99:3908:2:82:0,-22.6244,-343.952 0/1:120:106,14:106:4030:14:568:-15.339,0,-326.659 0/0:140:140,0:140:5336:0:0:0,-42.1442,-480.233 0/0:122:119,3:119:4537:3:110:0,-26.466,-398.109 dDocent_Contig_6278 40 . C T 1723.18 . AB=0.237389;ABP=204.88;AC=4;AF=0.333333;AN=12;AO=80;CIGAR=1X;DP=534;DPB=534;DPRA=0.85533;EPP=176.728;EPPR=988.859;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.988987;PAO=0;PQA=0;PQR=0;PRO=0;QA=3108;QR=17666;RO=454;RPL=0;RPP=176.728;RPPR=988.859;RPR=80;RUN=1;SAF=80;SAP=176.728;SAR=0;SRF=454;SRP=988.859;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:99:69,30:69:2634:30:1163:-75.1394,0,-207.391 0/1:92:61,31:61:2378:31:1189:-79.5911,0,-186.482 0/1:65:57,8:57:2259:8:315:-9.14661,0,-183.915 0/1:81:70,11:70:2723:11:441:-15.6624,0,-220.806 0/0:117:117,0:117:4528:0:0:0,-35.2205,-407.476 0/0:80:80,0:80:3144:0:0:0,-24.0824,-283.044 dDocent_Contig_6279 30 . G A 2418.43 . AB=0.172503;ABP=721.272;AC=2;AF=0.166667;AN=12;AO=247;CIGAR=1X;DP=2585;DPB=2585;DPRA=0;EPP=539.364;EPPR=5079.91;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.995951;PAIREDR=0.999572;PAO=0;PQA=0;PQR=0;PRO=0;QA=9783;QR=92836;RO=2338;RPL=0;RPP=539.364;RPPR=5079.91;RPR=247;RUN=1;SAF=247;SAP=539.364;SAR=0;SRF=2338;SRP=5079.91;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:416:385,31:385:15197:31:1234:0,-13.8954,-1255.26 0/0:518:477,41:477:19046:41:1623:0,-9.62951,-1566.24 0/1:309:261,48:261:10354:48:1908:-78.902,0,-838.174 0/0:424:408,16:408:16214:16:599:0,-73.4075,-1403.76 0/1:462:377,85:377:14984:85:3391:-166.163,0,-1208.35 0/0:456:430,26:430:17041:26:1028:0,-44.4533,-1439.52 dDocent_Contig_6280 171 . C T 1575.57 . AB=0.160131;ABP=617.04;AC=2;AF=0.166667;AN=12;AO=129;CIGAR=1X;DP=1439;DPB=1439;DPRA=1.00418;EPP=283.13;EPPR=2847.64;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.992248;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5016;QR=51377;RO=1310;RPL=129;RPP=283.13;RPPR=2847.64;RPR=0;RUN=1;SAF=0;SAP=283.13;SAR=129;SRF=0;SRP=2847.64;SRR=1310;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:201:186,15:186:7156:15:565:0,-9.33619,-592.575 0/0:153:145,8:145:5640:8:307:0,-18.0714,-479.459 0/0:239:239,0:239:9407:0:0:0,-71.9462,-846.065 0/0:234:226,8:226:8795:8:315:0,-41.726,-762.386 0/1:299:253,46:253:9976:46:1797:-71.9413,0,-807.232 0/1:313:261,52:261:10403:52:2032:-88.8374,0,-841.37 dDocent_Contig_6281 45 . G A 91.771 . AB=0.14;ABP=59.2949;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=272;DPB=272;DPRA=1.12613;EPP=18.2106;EPPR=578.45;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.857143;PAIREDR=0.716981;PAO=0;PQA=0;PQR=0;PRO=0;QA=282;QR=10597;RO=265;RPL=0;RPP=18.2106;RPPR=578.45;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=265;SRP=578.45;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:38,0:38:1490:0:0:0,-11.4391,-134.34 0/0:51:51,0:51:2051:0:0:0,-15.3525,-184.774 0/0:53:53,0:53:2118:0:0:0,-15.9546,-190.8 0/1:50:43,7:43:1714:7:282:-10.7,0,-139.434 0/0:39:39,0:39:1561:0:0:0,-11.7402,-140.731 0/0:41:41,0:41:1663:0:0:0,-12.3422,-149.89 dDocent_Contig_6282 20 . C A 24150.3 . AB=0.613655;ABP=142.698;AC=6;AF=0.5;AN=12;AO=764;CIGAR=10M2X;DP=1245;DPB=1209.83;DPRA=0;EPP=1662.02;EPPR=645.766;GTI=0;LEN=1;MEANALT=5.66667;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0.992147;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=30538;QR=11675;RO=296;RPL=0;RPP=1662.02;RPPR=645.766;RPR=764;RUN=1;SAF=764;SAP=1662.02;SAR=0;SRF=296;SRP=645.766;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:215:63,7,4,0,139:63:2494:7,4,0,139:271,147,0,5575:-440.385,-437.088,-640.246,-447.333,-630.336,-651.394,-459.35,-642.354,-652.598,-664.616,0,-183.019,-193.264,-205.28,-163.437 0|1:223:66,8,7,0,127:66:2595:8,7,0,127:306,267,0,5095:-399.933,-394.691,-605.73,-397.898,-586.235,-609.238,-419.801,-608.138,-611.345,-633.248,0,-188.343,-191.55,-213.453,-175.222 0|1:130:37,11,7,14,60:37:1463:11,7,14,60:415,268,553,2411:-187.542,-164.672,-281.759,-176.688,-263.077,-294.979,-153.18,-239.57,-251.586,-269.364,0,-86.3955,-98.4107,-74.902,-102.342 0|1:226:55,4,0,11,141:55:2169:4,0,11,141:153,0,431,5595:-443.991,-447.993,-625.245,-460.548,-626.449,-639.004,-425.105,-591.006,-603.561,-600.25,0,-165.906,-178.461,-143.018,-136.015 0|1:228:46,41,0,0,139:46:1820:41,0,0,139:1586,0,0,5520:-440.568,-324.14,-461.584,-454.415,-473.926,-604.201,-454.415,-473.926,-604.201,-604.201,0,-19.517,-149.79,-149.79,-107.947 0|1:223:29,27,4,0,158:29:1134:27,4,0,158:1033,131,0,6342:-513.837,-437.802,-522.906,-511.989,-520.456,-604.017,-522.567,-531.034,-605.221,-615.799,0,-8.47202,-82.6626,-93.2382,-45.6755 dDocent_Contig_6284 11 . A C 1857.29 . AB=0.115246;ABP=2145.19;AC=4;AF=0.333333;AN=12;AO=215;CIGAR=1X;DP=2458;DPB=2458;DPRA=0;EPP=469.877;EPPR=4864.94;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8638;QR=89379;RO=2239;RPL=0;RPP=469.877;RPPR=4864.94;RPR=215;RUN=1;SAF=215;SAP=469.877;SAR=0;SRF=2239;SRP=4864.94;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:420:373,46:373:14927:46:1822:-37.7043,0,-1215.77 0/1:420:368,52:368:14723:52:2092:-62.0272,0,-1197.5 0/1:397:357,40:357:14266:40:1623:-26.7864,0,-1163.33 0/1:429:374,54:374:14831:54:2169:-66.4328,0,-1204.74 0/0:451:432,18:432:17280:18:728:0,-69.8207,-1487.96 0/0:341:335,5:335:13352:5:204:0,-84.0153,-1181.96 dDocent_Contig_6285 31 . A T 12325.3 . AB=0.407749;ABP=83.1384;AC=6;AF=0.5;AN=12;AO=442;CIGAR=1M2I1X;DP=1084;DPB=1526;DPRA=0;EPP=962.801;EPPR=1358.01;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997738;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=17393;QR=24566;RO=624;RPL=0;RPP=962.801;RPPR=1358.01;RPR=442;RUN=1;SAF=442;SAP=962.801;SAR=0;SRF=624;SRP=1358.01;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:160:105,52:105:4071:52:2043:-136.411,0,-318.767 0|1:173:97,69:97:3830:69:2707:-193.428,0,-294.376 0|1:212:113,92:113:4474:92:3645:-266.032,0,-340.565 0|1:162:109,52:109:4286:52:2056:-136.469,0,-336.965 0|1:219:129,90:129:5121:90:3555:-254.064,0,-394.863 0|1:158:71,87:71:2784:87:3387:-257.343,0,-203.133 dDocent_Contig_6287 197 . A C 210.739 . AB=0.324324;ABP=12.9286;AC=3;AF=0.25;AN=12;AO=13;CIGAR=1X;DP=97;DPB=97;DPRA=0.74359;EPP=31.2394;EPPR=183.243;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=440;QR=2878;RO=83;RPL=13;RPP=31.2394;RPPR=183.243;RPR=0;RUN=1;SAF=0;SAP=31.2394;SAR=13;SRF=0;SRP=183.243;SRR=83;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:20,1:20:733:1:34:0,-2.92272,-62.8869 0/1:16:9,6:9:307:6:222:-15.4524,0,-23.0715 0/1:11:8,3:8:251:3:100:-6.01877,0,-19.578 0/1:10:7,3:7:227:3:84:-4.82447,0,-17.7316 0/0:22:22,0:22:791:0:0:0,-6.62266,-71.4969 0/0:17:17,0:17:569:0:0:0,-5.11751,-51.5148 dDocent_Contig_6288 18 . T G 3229.25 . AB=0.198765;ABP=641.434;AC=4;AF=0.333333;AN=12;AO=177;CIGAR=1X;DP=1134;DPB=1134;DPRA=0;EPP=387.361;EPPR=2081.11;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.974922;PAO=0;PQA=0;PQR=0;PRO=0;QA=7013;QR=38128;RO=957;RPL=0;RPP=387.361;RPPR=2081.11;RPR=177;RUN=1;SAF=177;SAP=387.361;SAR=0;SRF=957;SRP=2081.11;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:150:134,16:134:5370:16:637:-12.5101,0,-437.983 0/1:198:172,26:172:6811:26:1036:-33.929,0,-553.081 0/0:136:135,1:135:5383:1:40:0,-36.9444,-480.3 0/0:188:173,15:173:6859:15:606:0,-1.7167,-562.138 0/1:236:169,67:169:6760:67:2670:-169.385,0,-537.044 0/1:226:174,52:174:6945:52:2024:-114.323,0,-556.693 dDocent_Contig_6289 10 . G A 12928.9 . AB=0.173025;ABP=3776.04;AC=6;AF=0.5;AN=12;AO=703;CIGAR=1X;DP=4063;DPB=4063;DPRA=0;EPP=1529.56;EPPR=7299.16;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.99431;PAIREDR=0.985119;PAO=0;PQA=0;PQR=0;PRO=0;QA=28086;QR=134392;RO=3360;RPL=0;RPP=1529.56;RPPR=7299.16;RPR=703;RUN=1;SAF=703;SAP=1529.56;SAR=0;SRF=3360;SRP=7299.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:743:637,106:637:25485:106:4200:-154.311,0,-2067.71 0/1:850:704,146:704:28093:146:5888:-273.809,0,-2269.94 0/1:632:509,123:509:20376:123:4935:-253.766,0,-1641.82 0/1:713:633,80:633:25289:80:3214:-74.6902,0,-2059.11 0/1:523:393,130:393:15745:130:5164:-307.185,0,-1258.36 0/1:602:484,118:484:19404:118:4685:-240.354,0,-1563.47 dDocent_Contig_6290 14 . T C 225.484 . AB=0.123529;ABP=212.289;AC=2;AF=0.166667;AN=12;AO=24;CIGAR=1X;DP=444;DPB=444;DPRA=1.08571;EPP=55.1256;EPPR=915.029;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=969;QR=16516;RO=420;RPL=0;RPP=55.1256;RPPR=915.029;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=420;SRP=915.029;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:84:75,9:75:2952:9:363:-7.74777,0,-240.511 0/1:86:74,12:74:2895:12:484:-18.0225,0,-234.788 0/0:54:53,1:53:2088:1:41:0,-12.1611,-184.024 0/0:80:78,2:78:3076:2:81:0,-16.3967,-269.248 0/0:82:82,0:82:3196:0:0:0,-24.6845,-287.739 0/0:58:58,0:58:2309:0:0:0,-17.4597,-207.979 dDocent_Contig_6291 13 . A G 645.051 . AB=0.125;ABP=559.993;AC=1;AF=0.0833333;AN=12;AO=115;CIGAR=1X;DP=2322;DPB=2322;DPRA=1.40692;EPP=252.73;EPPR=4793.28;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9959;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.984587;PAO=0;PQA=0;PQR=0;PRO=0;QA=4568;QR=87357;RO=2206;RPL=0;RPP=252.73;RPPR=4793.28;RPR=115;RUN=1;SAF=115;SAP=252.73;SAR=0;SRF=2206;SRP=4793.28;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:289:288,0:288:11432:0:0:0,-86.6966,-1027.74 0/0:381:372,9:372:14634:9:353:0,-82.5616,-1283.86 0/0:305:298,7:298:11811:7:283:0,-65.9708,-1036.35 0/0:427:409,18:409:16125:18:720:0,-63.4118,-1384.91 0/1:456:399,57:399:15826:57:2257:-66.0279,0,-1285.89 0/0:464:440,24:440:17529:24:955:0,-53.4281,-1489.99 dDocent_Contig_6292 34 . C T 61.475 . AB=0.104167;ABP=133.661;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=821;DPB=821;DPRA=0.710417;EPP=42.0968;EPPR=1746.7;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=722;QR=31945;RO=803;RPL=0;RPP=42.0968;RPPR=1746.7;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=803;SRP=1746.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:96:86,10:86:3407:10:399:-7.36934,0,-277.773 0/0:109:105,4:105:4202:4:162:0,-17.8453,-363.177 0/0:54:54,0:54:2143:0:0:0,-16.2556,-193.041 0/0:136:132,4:132:5246:4:161:0,-26.0646,-457.129 0/0:209:209,0:209:8296:0:0:0,-62.9153,-746.191 0/0:217:217,0:217:8651:0:0:0,-65.3235,-778.082 dDocent_Contig_6293 9 . T G 583.724 . AB=0.143302;ABP=357.759;AC=2;AF=0.166667;AN=12;AO=46;CIGAR=1X;DP=1385;DPB=1385;DPRA=0.603383;EPP=102.898;EPPR=2906.27;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997008;PAO=0;PQA=0;PQR=0;PRO=0;QA=1751;QR=50912;RO=1337;RPL=0;RPP=102.898;RPPR=2906.27;RPR=46;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=1337;SRP=2906.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:162:161,0:161:6129:0:0:0,-48.4658,-551.161 0/0:379:379,0:379:14394:0:0:0,-114.09,-1294.84 0/0:186:186,0:186:7102:0:0:0,-55.9916,-639.049 0/0:337:336,0:336:12815:0:0:0,-101.146,-1152.44 0/1:171:150,21:150:5742:21:794:-20.3072,0,-465.271 0/1:150:125,25:125:4730:25:957:-41.2871,0,-380.593 dDocent_Contig_6294 53 . C T 1006.21 . AB=0.126789;ABP=1186.22;AC=1;AF=0.0833333;AN=12;AO=130;CIGAR=1X;DP=5843;DPB=5843;DPRA=0.826889;EPP=285.302;EPPR=12391.3;GTI=0;LEN=1;MEANALT=1.8;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999124;PAO=0;PQA=0;PQR=0;PRO=0;QA=4591;QR=223163;RO=5705;RPL=130;RPP=285.302;RPPR=12391.3;RPR=0;RUN=1;SAF=130;SAP=285.302;SAR=0;SRF=5705;SRP=12391.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:884:879,1:879:34197:1:30:0,-262.178,-3071.93 0/0:1060:1057,3:1057:41366:3:115:0,-308.367,-3708.56 0/0:771:770,1:770:30267:1:7:0,-231.394,-2720.71 0/0:1012:1010,1:1010:39471:1:38:0,-300.769,-3545.27 0/0:1138:1137,0:1137:44653:0:0:0,-342.271,-4014.68 0/1:978:852,124:852:33209:124:4401:-102.144,0,-2691.9 dDocent_Contig_6295 23 . C T 3608.33 . AB=0.217899;ABP=535.95;AC=5;AF=0.416667;AN=12;AO=175;CIGAR=1X;DP=933;DPB=933;DPRA=0;EPP=383.018;EPPR=1648.99;GTI=0;LEN=1;MEANALT=1;MQM=59.9714;MQMR=59.9908;NS=6;NUMALT=1;ODDS=0;PAIRED=0.00571429;PAIREDR=0.965699;PAO=0;PQA=0;PQR=0;PRO=0;QA=6957;QR=29694;RO=758;RPL=0;RPP=383.018;RPPR=1648.99;RPR=175;RUN=1;SAF=175;SAP=383.018;SAR=0;SRF=758;SRP=1648.99;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:162:155,7:155:6063:7:281:0,-23.1133,-519.836 0/1:186:167,19:167:6490:19:767:-13.3588,0,-527.903 0/1:111:76,35:76:3005:35:1366:-89.7846,0,-237.117 0/1:105:88,17:88:3420:17:677:-29.6531,0,-276.239 0/1:200:130,70:130:5112:70:2781:-190.198,0,-399.76 0/1:169:142,27:142:5604:27:1085:-47.0604,0,-453.318 dDocent_Contig_6297 67 . G A 56510 . AB=0.418208;ABP=282.566;AC=6;AF=0.5;AN=12;AO=2012;CIGAR=1X;DP=4811;DPB=4811;DPRA=0;EPP=4372.01;EPPR=6078.79;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=79066;QR=109030;RO=2798;RPL=2012;RPP=4372.01;RPPR=6078.79;RPR=0;RUN=1;SAF=2012;SAP=4372.01;SAR=0;SRF=2798;SRP=6078.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:720:518,201:518:20126:201:7883:-492.23,0,-1592.96 0/1:775:570,205:570:22279:205:7968:-483.45,0,-1770.05 0/1:675:525,150:525:20586:150:5891:-326.806,0,-1647.9 0/1:780:657,123:657:25437:123:4796:-196.777,0,-2052.51 0/1:895:243,652:243:9474:652:25668:-2038.59,0,-582.708 0/1:966:285,681:285:11128:681:26860:-2124.37,0,-710.053 dDocent_Contig_6298 11 . T C 27315.9 . AB=0.328476;ABP=809.756;AC=6;AF=0.5;AN=12;AO=1037;CIGAR=1X;DP=3157;DPB=3157;DPRA=0;EPP=2254.83;EPPR=4600.02;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999528;PAO=0;PQA=0;PQR=0;PRO=0;QA=41052;QR=81072;RO=2117;RPL=0;RPP=2254.83;RPPR=4600.02;RPR=1037;RUN=1;SAF=1037;SAP=2254.83;SAR=0;SRF=2117;SRP=4600.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:427:195,232:195:7528:232:9240:-702.504,0,-548.733 0/1:492:245,247:245:9353:247:9722:-726.289,0,-693.293 0/1:378:198,180:198:7507:180:7104:-525.253,0,-561.625 0/1:438:206,232:206:7924:232:9183:-694.085,0,-581.05 0/1:798:718,79:718:27639:79:3116:-40.2277,0,-2245.37 0/1:624:555,67:555:21121:67:2687:-54.453,0,-1712.14 dDocent_Contig_6299 98 . N C 255.109 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=263;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:25:-2.37496,-0.60206,0 1/1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:3:0,3:0:0:3:100:-9.33053,-0.90309,0 dDocent_Contig_6300 17 . T A 180.113 . AB=0.25;ABP=20.3821;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X1M1X;DP=98;DPB=98;DPRA=2.42424;EPP=20.3821;EPPR=198.443;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.922222;PAO=0;PQA=0;PQR=0;PRO=0;QA=320;QR=3598;RO=90;RPL=0;RPP=20.3821;RPPR=198.443;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=90;SRP=198.443;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:8:8,0:8:324:0:0:0,-2.40824,-29.5292 0|0:6:6,0:6:240:0:0:0,-1.80618,-21.9745 0|1:32:24,8:24:950:8:320:-19.5342,0,-76.1722 0|0:10:10,0:10:400:0:0:0,-3.0103,-36.3594 0|0:27:27,0:27:1085:0:0:0,-8.12781,-97.9381 0|0:15:15,0:15:599:0:0:0,-4.51545,-54.2484 dDocent_Contig_6301 98 . N C 198.363 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=201;QR=0;RO=0;RPL=7;RPP=18.2106;RPPR=0;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:26:-2.59983,-0.30103,0 1/1:2:0,2:0:0:2:46:-4.36896,-0.60206,0 1/1:3:0,3:0:0:3:95:-8.86469,-0.90309,0 dDocent_Contig_6302 78 . T C 404.431 . AB=0.125;ABP=989.945;AC=1;AF=0.0833333;AN=12;AO=294;CIGAR=1X;DP=4793;DPB=4793;DPRA=0;EPP=641.423;EPPR=9757.26;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=59.9991;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999777;PAO=0;PQA=0;PQR=0;PRO=0;QA=9183;QR=151327;RO=4492;RPL=294;RPP=641.423;RPPR=9757.26;RPR=0;RUN=1;SAF=294;SAP=641.423;SAR=0;SRF=4492;SRP=9757.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:732:687,44:687:23078:44:1334:0,-99.8713,-1956.33 0/0:894:804,88:804:26867:88:2786:0,-17.6639,-2166.57 0/0:464:449,13:449:15201:13:422:0,-101.112,-1329.66 0/1:808:706,101:706:23841:101:3164:-41.966,0,-1902.26 0/0:1012:964,47:964:32513:47:1443:0,-174.537,-2795.36 0/0:883:882,1:882:29827:1:34:0,-262.411,-2680.44 dDocent_Contig_6303 23 . A G 36486.3 . AB=0.0538272;ABP=3504.44;AC=0;AF=0;AN=12;AO=109;CIGAR=3M3D5M1X;DP=2025;DPB=1653.75;DPRA=0;EPP=239.701;EPPR=897.657;GTI=0;LEN=1;MEANALT=8.16667;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3892;QR=15700;RO=412;RPL=0;RPP=239.701;RPPR=897.657;RPR=109;RUN=1;SAF=109;SAP=239.701;SAR=0;SRF=412;SRP=897.657;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:267:43,10,15,175,6,11:43:1650:10,15,175,6,11:398,531,6277,218,396:-498.871,-479.042,-611.472,-468.572,-571.239,-599.497,0,-102.667,-92.2022,-82.7614,-494.016,-596.682,-586.213,-117.643,-627.65,-479.507,-582.174,-571.704,-103.135,-597.148,-611.636 0|0:270:69,12,22,154,0,10:69:2646:12,22,154,0,10:471,761,5534,0,377:-430.594,-412.626,-626.194,-389.541,-567.982,-600.098,0,-178.444,-155.364,-170.824,-451.365,-629.806,-606.72,-217.183,-668.545,-420.468,-598.909,-575.824,-186.287,-637.648,-634.638 0|0:365:98,28,38,167,0,10:98:3744:28,38,167,0,10:1099,1354,6169,0,364:-475.044,-414.155,-712.915,-394.204,-611.003,-689.952,0,-216.8,-196.851,-256.917,-504.545,-721.343,-701.391,-307.189,-811.732,-474.815,-691.613,-671.661,-277.46,-782.002,-778.992 0|0:288:37,6,24,173,0,32:37:1399:6,24,173,0,32:238,893,6249,0,1142:-498.82,-490.366,-603.235,-436.87,-531.953,-544.321,0,-95.0826,-41.5887,-62.5977,-509.959,-605.042,-551.546,-114.676,-624.634,-416.871,-511.954,-458.458,-21.5936,-531.547,-521.914 0|0:436:83,0,7,304,24,0:83:3159:0,7,304,24,0:0,268,10933,840,0:-866.817,-891.803,-1150.91,-869.811,-1128.92,-1126.81,0,-259.113,-237.121,-167.6,-823.47,-1082.58,-1060.58,-190.785,-1075.35,-891.803,-1150.91,-1128.92,-259.113,-1082.58,-1150.91 0|0:399:82,0,3,308,0,0:82:3102:0,3,308,0,0:0,85,11196,0,0:-889.701,-914.385,-1168.67,-907.644,-1161.93,-1161.03,0,-254.419,-247.679,-161.702,-914.385,-1168.67,-1161.93,-254.419,-1168.67,-914.385,-1168.67,-1161.93,-254.419,-1168.67,-1168.67 dDocent_Contig_6304 106 . N T 189.683 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=6;CIGAR=2X;DP=6;DPB=11.5;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=8.76405;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=207;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:6:0,6:0:0:6:207:-18.9682,-1.80618,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_6305 31 . A T 44.6911 . AB=0.111111;ABP=73.9451;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=185;DPB=185;DPRA=2.11111;EPP=20.3821;EPPR=387.361;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.983051;PAO=0;PQA=0;PQR=0;PRO=0;QA=325;QR=7079;RO=177;RPL=0;RPP=20.3821;RPPR=387.361;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=177;SRP=387.361;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:45:45,0:45:1814:0:0:0,-13.5463,-163.463 0/1:54:48,6:48:1902:6:243:-5.99198,0,-155.125 0/0:23:23,0:23:916:0:0:0,-6.92369,-82.7416 0/0:41:39,2:39:1563:2:82:0,-4.56255,-133.13 0/0:10:10,0:10:409:0:0:0,-3.0103,-37.1706 0/0:12:12,0:12:475:0:0:0,-3.61236,-43.0944 dDocent_Contig_6306 26 . C A 163328 . AB=0.808226;ABP=3213;AC=12;AF=1;AN=12;AO=4669;CIGAR=1X2M;DP=5576;DPB=5576;DPRA=0;EPP=10141.6;EPPR=643.595;GTI=0;LEN=1;MEANALT=3.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=185633;QR=11615;RO=295;RPL=0;RPP=10141.6;RPPR=643.595;RPR=4669;RUN=1;SAF=4669;SAP=10141.6;SAR=0;SRF=295;SRP=643.595;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:737:31,79,626:31:1184:79,626:2985,24757:-2175.36,-1940.06,-2013.41,-147.505,0,-56.1908 1|1:912:20,59,831:20:781:59,831:2277,32999:-2896.33,-2715.36,-2761.8,-185.953,-63.159,0 1|1:774:55,24,694:55:2156:24,694:929,27708:-2297,-2237.25,-2407.31,-31.622,-132.604,0 1|1:969:10,111,847:10:402:111,847:4273,33655:-3085.23,-2737.43,-2737.14,-317.672,0,-95.8297 1|1:1050:148,216,685:148:5865:216,685:8351,27280:-2404.8,-1763.47,-2181.18,-203.139,0,-479.674 1|1:1134:31,115,986:31:1227:115,986:4404,39234:-3481.3,-3129.25,-3195.61,-260.392,0,-64.5586 dDocent_Contig_6307 18 . C A 499.121 . AB=0.130159;ABP=377.255;AC=5;AF=0.416666;AN=12;AO=42;CIGAR=1X1M;DP=350;DPB=350;DPRA=0;EPP=94.2121;EPPR=647.938;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.738095;PAIREDR=0.670034;PAO=0;PQA=0;PQR=0;PRO=0;QA=1558;QR=11735;RO=297;RPL=0;RPP=94.2121;RPPR=647.938;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=297;SRP=647.938;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:53:47,0,6:47:1839:0,6:0,212:-3.46523,-17.6136,-168.845,0,-151.589,-149.783 0|1:81:69,2,9:69:2715:2,9:78,333:-6.46283,-20.8183,-243.563,0,-216.932,-220.634 0|1:58:50,6,2:50:2005:6,2:237,80:-4.44729,0,-163.385,-12.9074,-158.601,-177.501 0|1:71:52,1,18:52:2037:1,18:28,686:-40.714,-54.1542,-221.353,0,-165.385,-162.183 0|0:35:33,0,1:33:1318:0,1:0,32:0,-9.93399,-118.524,-7.4004,-115.948,-115.646 0|1:52:46,0,6:46:1821:0,6:0,215:-4.04114,-17.8885,-167.798,0,-150.272,-148.466 dDocent_Contig_6308 27 . T C 1047.62 . AB=0.165312;ABP=362.033;AC=2;AF=0.166667;AN=12;AO=82;CIGAR=1X;DP=1496;DPB=1496;DPRA=0.591534;EPP=181.071;EPPR=3071.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3273;QR=55243;RO=1413;RPL=0;RPP=181.071;RPPR=3071.3;RPR=82;RUN=1;SAF=82;SAP=181.071;SAR=0;SRF=1413;SRP=3071.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:179:146,33:146:5633:33:1314:-64.638,0,-452.983 0/0:201:199,2:199:7752:2:81:0,-52.8213,-689.679 0/1:190:162,28:162:6391:28:1114:-43.3457,0,-517.793 0/0:195:190,5:190:7416:5:202:0,-40.1388,-648.602 0/0:378:377,0:377:14778:0:0:0,-113.488,-1328.92 0/0:353:339,14:339:13273:14:562:0,-55.3422,-1142.79 dDocent_Contig_6309 20 . A T 9876.91 . AB=0.355086;ABP=193.075;AC=4;AF=0.333333;AN=12;AO=374;CIGAR=1X;DP=2283;DPB=2283;DPRA=0.521327;EPP=815.141;EPPR=4139.67;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=14697;QR=74333;RO=1905;RPL=0;RPP=815.141;RPPR=4139.67;RPR=374;RUN=1;SAF=374;SAP=815.141;SAR=0;SRF=1905;SRP=4139.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:263:182,81:182:7145:81:3222:-210.89,0,-563.623 0/1:292:220,72:220:8665:72:2826:-166.567,0,-691.532 0/1:206:143,63:143:5633:63:2433:-157.114,0,-444.83 0/1:281:127,154:127:4971:154:6057:-460.341,0,-362.747 0/0:633:632,0:632:24607:0:0:0,-190.251,-2212.67 0/0:608:601,4:601:23312:4:159:0,-167.773,-2081.81 dDocent_Contig_6310 21 . T A 224.507 . AB=0.137405;ABP=152.61;AC=3;AF=0.25;AN=12;AO=23;CIGAR=1X;DP=271;DPB=271;DPRA=1.21519;EPP=52.9542;EPPR=541.535;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.826087;PAIREDR=0.762097;PAO=0;PQA=0;PQR=0;PRO=0;QA=929;QR=9966;RO=248;RPL=0;RPP=52.9542;RPPR=541.535;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=248;SRP=541.535;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:48:40,8:40:1615:8:325:-15.1696,0,-131.129 0/0:61:56,5:56:2259:5:196:0,-0.348364,-185.45 0/1:39:34,5:34:1347:5:204:-7.00386,0,-109.756 0/1:44:39,5:39:1569:5:204:-5.49871,0,-128.202 0/0:42:42,0:42:1693:0:0:0,-12.6433,-152.59 0/0:37:37,0:37:1483:0:0:0,-11.1381,-133.715 dDocent_Contig_6311 92 . A C 85.5349 . AB=0.170732;ABP=41.6201;AC=1;AF=0.0833333;AN=12;AO=23;CIGAR=1X;DP=341;DPB=341;DPRA=0;EPP=52.9542;EPPR=689.196;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.782609;PAIREDR=0.727848;PAO=0;PQA=0;PQR=0;PRO=0;QA=761;QR=10819;RO=316;RPL=23;RPP=52.9542;RPPR=689.196;RPR=0;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=316;SRP=689.196;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:34,7:34:1174:7:242:-9.77534,0,-93.6242 0/0:71:66,5:66:2231:5:166:0,-6.10586,-185.789 0/0:41:37,4:37:1267:4:110:0,-2.16984,-104.158 0/0:45:42,3:42:1451:3:105:0,-3.75019,-121.091 0/0:63:62,1:62:2130:1:34:0,-15.566,-188.574 0/0:80:75,3:75:2566:3:104:0,-14.1198,-221.499 dDocent_Contig_6312 21 . C T 171.674 . AB=0.120567;ABP=179.331;AC=2;AF=0.166667;AN=12;AO=35;CIGAR=1X;DP=555;DPB=555;DPRA=0.95288;EPP=79.0118;EPPR=1132.18;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1416;QR=20902;RO=520;RPL=0;RPP=79.0118;RPPR=1132.18;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=520;SRP=1132.18;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:51:44,7:44:1748:7:285:-10.6719,0,-142.173 0/1:90:80,10:80:3232:10:405:-9.71684,0,-263.84 0/0:136:125,11:125:5002:11:449:0,-0.174203,-409.281 0/0:87:80,7:80:3232:7:277:0,-0.891885,-265.63 0/0:89:89,0:89:3579:0:0:0,-26.7917,-322.119 0/0:102:102,0:102:4109:0:0:0,-30.7051,-369.764 dDocent_Contig_6313 1 . N G 533.88 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=16;CIGAR=1X;DP=16;DPB=16;DPRA=0;EPP=37.7539;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=566;QR=0;RO=0;RPL=0;RPP=37.7539;RPPR=0;RPR=16;RUN=1;SAF=0;SAP=37.7539;SAR=16;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0 1/1:2:0,2:0:0:2:72:-6.83672,-0.60206,0 1/1:3:0,3:0:0:3:108:-10.0752,-0.90309,0 1/1:3:0,3:0:0:3:104:-9.7028,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:138:-12.7602,-1.20412,0 dDocent_Contig_6314 9 . T G 173.002 . AB=0.108871;ABP=332.549;AC=1;AF=0.0833333;AN=12;AO=60;CIGAR=1X;DP=1209;DPB=1209;DPRA=1.06597;EPP=133.299;EPPR=2495.86;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.979965;PAO=0;PQA=0;PQR=0;PRO=0;QA=2306;QR=43847;RO=1148;RPL=0;RPP=133.299;RPPR=2495.86;RPR=60;RUN=1;SAF=60;SAP=133.299;SAR=0;SRF=1148;SRP=2495.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:204:199,5:199:7611:5:184:0,-44.4923,-667.897 0/1:248:220,27:220:8425:27:1036:-18.823,0,-683.295 0/0:112:106,6:106:4022:6:232:0,-12.4664,-340.82 0/0:191:178,13:178:6800:13:503:0,-11.878,-566.274 0/0:191:191,0:191:7266:0:0:0,-57.4967,-653.804 0/0:263:254,9:254:9723:9:351:0,-47.2191,-842.799 dDocent_Contig_6315 8 . A G 267.431 . AB=0.144928;ABP=154.132;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=614;DPB=614;DPRA=1.44958;EPP=46.4397;EPPR=1292.86;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=772;QR=22663;RO=594;RPL=0;RPP=46.4397;RPPR=1292.86;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=594;SRP=1292.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:75:75,0:75:2849:0:0:0,-22.5772,-256.59 0/0:96:96,0:96:3673:0:0:0,-28.8989,-330.687 0/0:67:67,0:67:2561:0:0:0,-20.169,-230.689 0/0:85:85,0:85:3240:0:0:0,-25.5875,-291.749 0/0:153:153,0:153:5836:0:0:0,-46.0576,-525.207 0/1:138:118,20:118:4504:20:772:-28.266,0,-363.878 dDocent_Contig_6316 19 . G A 263.229 . AB=0.118143;ABP=303.177;AC=1;AF=0.0833333;AN=12;AO=44;CIGAR=1X;DP=996;DPB=996;DPRA=1.91228;EPP=98.5551;EPPR=2061.57;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=59.7616;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995781;PAO=0;PQA=0;PQR=0;PRO=0;QA=1747;QR=37793;RO=948;RPL=0;RPP=98.5551;RPPR=2061.57;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=948;SRP=2061.57;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:137:137,0:137:5415:0:0:0,-41.2411,-487.135 0/0:129:129,0:129:5168:0:0:0,-38.8329,-464.975 0/0:76:76,0:76:3007:0:0:0,-22.8783,-270.717 0/0:185:180,5:180:7175:5:202:0,-37.1287,-626.023 0/0:232:217,11:217:8689:11:446:0,-28.5362,-740.999 0/1:237:209,28:209:8339:28:1099:-27.8458,0,-678.594 dDocent_Contig_6317 50 . A T 55.3244 . AB=0.116667;ABP=79.5909;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=265;DPB=265;DPRA=1.22689;EPP=26.8965;EPPR=545.913;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.363636;PAIREDR=0.866142;PAO=0;PQA=0;PQR=0;PRO=0;QA=432;QR=10142;RO=254;RPL=11;RPP=26.8965;RPPR=545.913;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=254;SRP=554.564;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:38,1:38:1524:1:41:0,-7.6456,-133.307 0/1:60:53,7:53:2106:7:275:-7.05531,0,-171.668 0/0:47:44,3:44:1762:3:116:0,-3.33139,-147.982 0/0:41:41,0:41:1634:0:0:0,-12.3422,-147.288 0/0:36:36,0:36:1427:0:0:0,-10.8371,-128.681 0/0:42:42,0:42:1689:0:0:0,-12.6433,-152.235 dDocent_Contig_6318 36 . G A 4049.32 . AB=0.0646552;ABP=384.927;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1M2I7M1X5M;DP=430;DPB=397.714;DPRA=0;EPP=35.5824;EPPR=378.675;GTI=0;LEN=1;MEANALT=3.33333;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.988439;PAO=0;PQA=0;PQR=0;PRO=0;QA=566;QR=6677;RO=173;RPL=0;RPP=35.5824;RPPR=378.675;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=173;SRP=378.675;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:42:21,0,0,2,18:21:824:0,0,2,18:0,0,75,675:-49.0397,-55.3613,-123.145,-55.3613,-123.145,-123.145,-49.2164,-117.002,-117.002,-116.4,0,-67.8666,-67.8666,-61.7234,-62.4481 0|0:81:35,7,1,37,0:35:1355:7,1,37,0:260,37,1434,0:-107.301,-96.5608,-205.763,-114.81,-204.843,-225.818,0,-90.0678,-108.317,-100.206,-117.837,-207.87,-226.119,-111.344,-229.146 0|0:98:39,15,5,20,19:39:1508:15,5,20,19:581,196,795,733:-53.7152,-17.7323,-137.07,-49.3371,-125.468,-171.686,0,-76.1315,-107.737,-117.835,-5.27254,-81.4018,-113.007,-63.671,-123.406 0|1:53:38,0,9,0,6:38:1453:0,9,0,6:0,333,0,230:-15.7867,-27.2258,-146.451,0,-119.219,-116.51,-27.2258,-146.451,-119.219,-146.451,-8.34405,-127.574,-100.343,-127.574,-125.768 0|0:70:9,30,0,12,18:9:353:30,0,12,18:1115,0,462,685:-115.673,-27.1441,-47.1463,-118.383,-56.1772,-147.415,-80.4498,-18.2463,-109.483,-105.871,-62.2005,0,-91.2342,-53.3015,-85.8157 0|0:86:31,20,0,9,26:31:1184:20,0,9,26:771,0,360,1021:-74.6383,-20.6649,-111.777,-83.9702,-117.798,-181.106,-54.3141,-88.1418,-151.45,-148.741,0,-33.8264,-97.1349,-67.478,-89.3081 dDocent_Contig_6319 1 . N G 151.092 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=156;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:117:-10.9102,-0.90309,0 1/1:1:0,1:0:0:1:39:-3.89656,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6320 72 . C T 137.886 . AB=0.113208;ABP=485.118;AC=2;AF=0.166667;AN=12;AO=93;CIGAR=1X;DP=1574;DPB=1574;DPRA=0;EPP=204.957;EPPR=3147.68;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.957432;PAO=0;PQA=0;PQR=0;PRO=0;QA=3094;QR=50029;RO=1480;RPL=93;RPP=204.957;RPPR=3216.79;RPR=0;RUN=1;SAF=93;SAP=204.957;SAR=0;SRF=1472;SRP=3147.68;SRR=8;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:183:174,9:174:5742:9:303:0,-27.4906,-489.351 0/0:347:344,3:344:11579:3:102:0,-94.9405,-1032.58 0/1:227:199,28:199:6747:28:926:-15.3104,0,-539.012 0/1:144:130,14:130:4450:14:480:-0.179129,0,-357.343 0/0:291:275,16:275:9216:16:528:0,-39.7635,-781.677 0/0:382:358,23:358:12295:23:755:0,-46.5147,-1038.23 dDocent_Contig_6321 27 . G A 1268.09 . AB=0.20625;ABP=242.849;AC=5;AF=0.416667;AN=12;AO=69;CIGAR=1X;DP=360;DPB=360;DPRA=0;EPP=152.842;EPPR=634.909;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.652174;PAIREDR=0.670103;PAO=0;PQA=0;PQR=0;PRO=0;QA=2679;QR=11605;RO=291;RPL=0;RPP=152.842;RPPR=634.909;RPR=69;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=291;SRP=634.909;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:57:48,9:48:1906:9:333:-13.1555,0,-154.584 0/1:78:65,13:65:2613:13:514:-23.1219,0,-211.814 0/0:40:37,3:37:1499:3:116:0,-1.22492,-124.333 0/1:37:26,11:26:1029:11:413:-26.3739,0,-81.7626 0/1:78:58,20:58:2286:20:777:-46.764,0,-182.434 0/1:70:57,13:57:2272:13:526:-26.6155,0,-183.571 dDocent_Contig_6322 24 . C T 491.717 . AB=0.234234;ABP=71.1085;AC=4;AF=0.333333;AN=12;AO=26;CIGAR=1X;DP=157;DPB=157;DPRA=1.20652;EPP=59.4686;EPPR=287.473;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.89313;PAO=0;PQA=0;PQR=0;PRO=0;QA=982;QR=5133;RO=131;RPL=0;RPP=59.4686;RPPR=287.473;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=131;SRP=287.473;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:18,8:18:698:8:283:-17.9717,0,-55.3201 0/1:26:20,6:20:745:6:238:-13.9672,0,-59.5343 0/0:21:21,0:21:836:0:0:0,-6.32163,-75.558 0/1:30:24,6:24:952:6:233:-12.3058,0,-76.9555 0/1:29:23,6:23:913:6:228:-12.1489,0,-73.7499 0/0:25:25,0:25:989:0:0:0,-7.52575,-89.3116 dDocent_Contig_6323 18 . A C 8949.63 . AB=0.169287;ABP=2842.51;AC=4;AF=0.333333;AN=12;AO=570;CIGAR=1X;DP=4465;DPB=4465;DPRA=0;EPP=1240.75;EPPR=8458.72;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=22569;QR=151093;RO=3894;RPL=0;RPP=1240.75;RPPR=8458.72;RPR=570;RUN=1;SAF=570;SAP=1240.75;SAR=0;SRF=3894;SRP=8458.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:793:669,124:669:25939:124:4869:-199.415,0,-2094 0/1:889:728,161:728:28242:161:6402:-308.33,0,-2272.16 0/1:529:439,90:439:17051:90:3550:-160.304,0,-1374.25 0/1:778:647,131:647:25064:131:5205:-234.137,0,-2019.83 0/0:789:773,15:773:29981:15:591:0,-184.083,-2642.61 0/0:687:638,49:638:24816:49:1952:0,-30.923,-2055.82 dDocent_Contig_6324 13 . C A 2364.62 . AB=0.258312;ABP=201.392;AC=4;AF=0.333333;AN=12;AO=113;CIGAR=1X;DP=752;DPB=752;DPRA=0;EPP=248.387;EPPR=1373.21;GTI=0;LEN=1;MEANALT=1.66667;MQM=59.5664;MQMR=59.962;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0;PAIREDR=0.99683;PAO=0;PQA=0;PQR=0;PRO=0;QA=4470;QR=25312;RO=631;RPL=0;RPP=248.387;RPPR=1373.21;RPR=113;RUN=1;SAF=113;SAP=248.387;SAR=0;SRF=631;SRP=1373.21;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:73:63,9:63:2559:9:365:-11.3381,0,-208.572 0/1:92:68,23:68:2690:23:915:-54.9941,0,-214.693 0/1:131:74,57:74:2962:57:2245:-162.782,0,-227.223 0/1:95:81,12:81:3252:12:472:-14.5688,0,-264.496 0/0:242:237,5:237:9514:5:193:0,-55.1101,-837.349 0/0:119:108,7:108:4335:7:280:0,-9.31632,-364.587 dDocent_Contig_6325 1 . N G 76.8682 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6326 1 . N A 891.022 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=26;CIGAR=1X1M7I2M;DP=26;DPB=71.5;DPRA=0;EPP=59.4686;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=979;QR=0;RO=0;RPL=0;RPP=59.4686;RPPR=0;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:18:0,18:0:0:18:680:-61.5352,-5.41854,0 .:.:.:.:.:.:.:. 1|1:8:0,8:0:0:8:299:-27.266,-2.40824,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_6327 61 . C T 170.005 . AB=0.157895;ABP=80.269;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=432;DPB=432;DPRA=1.06742;EPP=29.068;EPPR=912.857;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.25;PAIREDR=0.837709;PAO=0;PQA=0;PQR=0;PRO=0;QA=454;QR=16364;RO=419;RPL=12;RPP=29.068;RPPR=912.857;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=419;SRP=912.857;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:60:60,0:60:2336:0:0:0,-18.0618,-210.401 0/0:89:89,0:89:3494:0:0:0,-26.7917,-314.515 0/0:61:61,0:61:2339:0:0:0,-18.3628,-210.67 0/0:81:81,0:81:3168:0:0:0,-24.3834,-285.195 0/0:65:65,0:65:2602:0:0:0,-19.5669,-234.31 0/1:76:63,12:63:2425:12:454:-18.5233,0,-195.724 dDocent_Contig_6328 72 . C T 378.702 . AB=0.19685;ABP=104.386;AC=2;AF=0.166667;AN=12;AO=41;CIGAR=1X;DP=403;DPB=403;DPRA=0;EPP=75.5163;EPPR=789.083;GTI=0;LEN=1;MEANALT=1;MQM=56.7561;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.341463;PAIREDR=0.519337;PAO=0;PQA=0;PQR=0;PRO=0;QA=1466;QR=12530;RO=362;RPL=28;RPP=14.9269;RPPR=53.782;RPR=13;RUN=1;SAF=26;SAP=9.41879;SAR=15;SRF=227;SRP=53.782;SRR=135;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:63:58,5:58:2002:5:178:0,-2.59617,-164.078 0/1:64:56,8:56:1935:8:287:-6.90897,0,-155.153 0/1:63:46,17:46:1640:17:590:-34.1831,0,-128.916 0/0:56:53,3:53:1828:3:115:0,-6.1332,-154.067 0/0:77:70,7:70:2381:7:261:0,-3.26528,-194.63 0/0:80:79,1:79:2744:1:35:0,-20.5838,-243.697 dDocent_Contig_6329 24 . G A 60.9398 . AB=0.122449;ABP=63.6786;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=321;DPB=321;DPRA=0.900735;EPP=16.0391;EPPR=687.024;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.333333;PAIREDR=0.771429;PAO=0;PQA=0;PQR=0;PRO=0;QA=241;QR=12577;RO=315;RPL=0;RPP=16.0391;RPPR=687.024;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=315;SRP=687.024;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:49:43,6:43:1707:6:241:-7.31583,0,-139.102 0/0:65:65,0:65:2602:0:0:0,-19.5669,-234.3 0/0:44:44,0:44:1764:0:0:0,-13.2453,-158.978 0/0:40:40,0:40:1565:0:0:0,-12.0412,-141.082 0/0:66:66,0:66:2645:0:0:0,-19.868,-238.171 0/0:57:57,0:57:2294:0:0:0,-17.1587,-206.618 dDocent_Contig_6330 97 . G A 443.732 . AB=0.37037;ABP=10.8919;AC=1;AF=0.0833333;AN=12;AO=21;CIGAR=1X;DP=1644;DPB=1644;DPRA=0.617834;EPP=48.6112;EPPR=3527.31;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998152;PAO=0;PQA=0;PQR=0;PRO=0;QA=722;QR=54961;RO=1623;RPL=21;RPP=48.6112;RPPR=3527.31;RPR=0;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=1623;SRP=3527.31;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:334:333,1:333:11264:1:35:0,-97.0454,-1010.26 0/0:453:453,0:453:15311:0:0:0,-136.367,-1377.86 0/0:247:247,0:247:8358:0:0:0,-74.3544,-752.299 0/0:452:452,0:452:15342:0:0:0,-136.066,-1380.65 0/1:54:34,20:34:1154:20:687:-45.8961,0,-87.9085 0/0:104:104,0:104:3532:0:0:0,-31.3071,-318.109 dDocent_Contig_6331 7 . A C 155.684 . AB=0.222222;ABP=27.1378;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=179;DPB=179;DPRA=1.25874;EPP=20.3821;EPPR=374.332;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=0.75;PAIREDR=0.80117;PAO=0;PQA=0;PQR=0;PRO=0;QA=303;QR=6567;RO=171;RPL=0;RPP=20.3821;RPPR=374.332;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=171;SRP=374.332;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:28,8:28:1067:8:303:-16.7903,0,-85.495 0/0:33:33,0:33:1270:0:0:0,-9.93399,-114.592 0/0:28:28,0:28:1081:0:0:0,-8.42884,-97.5959 0/0:27:27,0:27:1044:0:0:0,-8.12781,-94.2682 0/0:23:23,0:23:893:0:0:0,-6.92369,-80.6893 0/0:32:32,0:32:1212:0:0:0,-9.63296,-109.374 dDocent_Contig_6333 24 . C T 1466.05 . AB=0.202643;ABP=177.35;AC=2;AF=0.166667;AN=12;AO=53;CIGAR=1X2M;DP=437;DPB=437;DPRA=0;EPP=118.098;EPPR=730.454;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.849057;PAIREDR=0.98209;PAO=0;PQA=0;PQR=0;PRO=0;QA=2109;QR=13264;RO=335;RPL=0;RPP=118.098;RPPR=730.454;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=335;SRP=730.454;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:61:55,4,2:55:2172:4,2:163,81:0,-3.10768,-180.602,-9.87831,-175.127,-187.973 0|0:43:41,0,1:41:1616:0,1:0,38:0,-12.3422,-145.283,-9.24058,-142.167,-141.866 0|0:20:19,0,1:19:764:0,1:0,40:0,-5.71957,-68.6822,-2.02492,-65.3873,-65.0862 0|0:86:80,3,3:80:3159:3,3:120,122:0,-14.2007,-273.21,-14.0159,-264.049,-273.031 0|1:63:45,15,2:45:1765:15,2:587,82:-34.7063,0,-140.603,-41.4825,-138.349,-186.01 0|1:164:95,23,44:95:3788:23,44:917,1746:-115.12,-68.2041,-373.227,0,-236.431,-298.7 dDocent_Contig_6334 9 . T C 51.5776 . AB=0.122449;ABP=63.6786;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=471;DPB=471;DPRA=0.623955;EPP=18.2106;EPPR=1010.57;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.993534;PAO=0;PQA=0;PQR=0;PRO=0;QA=273;QR=17851;RO=464;RPL=0;RPP=18.2106;RPPR=1010.57;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=464;SRP=1010.57;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:54,0:54:2083:0:0:0,-16.2556,-187.701 0/1:49:43,6:43:1652:6:234:-6.68063,0,-134.192 0/0:101:101,0:101:3888:0:0:0,-30.404,-350.018 0/0:63:62,1:62:2390:1:39:0,-15.0683,-211.412 0/0:99:99,0:99:3811:0:0:0,-29.802,-343.09 0/0:105:105,0:105:4027:0:0:0,-31.6081,-362.518 dDocent_Contig_6335 78 . G A 85.6424 . AB=0.15625;ABP=68.6973;AC=3;AF=0.25;AN=12;AO=10;CIGAR=1X;DP=147;DPB=147;DPRA=0.771084;EPP=24.725;EPPR=300.502;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.956204;PAO=0;PQA=0;PQR=0;PRO=0;QA=343;QR=4635;RO=137;RPL=10;RPP=24.725;RPPR=300.502;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=137;SRP=300.502;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:39,0:39:1311:0:0:0,-11.7402,-118.285 0/1:18:16,2:16:547:2:66:-0.849773,0,-44.1355 0/0:25:25,0:25:860:0:0:0,-7.52575,-77.716 0/1:23:18,5:18:624:5:175:-9.17,0,-49.562 0/0:19:19,0:19:638:0:0:0,-5.71957,-57.7361 0/1:23:20,3:20:655:3:102:-2.59311,0,-52.335 dDocent_Contig_6336 98 . N T 297.655 . AB=0;ABP=0;AC=10;AF=0.833333;AN=12;AO=11;CIGAR=1X;DP=12;DPB=12;DPRA=2.2;EPP=26.8965;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=305;QR=0;RO=0;RPL=11;RPP=26.8965;RPPR=0;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:3:0,3:0:0:3:77:-7.18411,-0.90309,0 1/1:3:0,3:0:0:3:94:-8.77149,-0.90309,0 1/1:3:0,3:0:0:3:65:-6.06573,-0.90309,0 0/0:1:0,0:0:0:0:0:0,0,0 dDocent_Contig_6337 1 . N G 230.466 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=244;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:123:-11.4648,-0.90309,0 1/1:3:0,3:0:0:3:121:-11.2802,-0.90309,0 dDocent_Contig_6338 18 . C T 159.365 . AB=0.125;ABP=149.585;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=459;DPB=459;DPRA=1.35385;EPP=46.4397;EPPR=956.287;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993166;PAO=0;PQA=0;PQR=0;PRO=0;QA=811;QR=17356;RO=439;RPL=0;RPP=46.4397;RPPR=956.287;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=439;SRP=956.287;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:58:52,6:52:2064:6:244:-4.87909,0,-168.477 0/1:62:53,9:53:2092:9:362:-14.2792,0,-169.805 0/0:144:139,5:139:5494:5:205:0,-24.5133,-475.462 0/0:47:47,0:47:1874:0:0:0,-14.1484,-168.865 0/0:88:88,0:88:3448:0:0:0,-26.4906,-310.365 0/0:60:60,0:60:2384:0:0:0,-18.0618,-214.717 dDocent_Contig_6339 12 . C T 384.138 . AB=0.11747;ABP=424.982;AC=2;AF=0.166667;AN=12;AO=39;CIGAR=1X;DP=906;DPB=906;DPRA=1.15679;EPP=87.6977;EPPR=1885.68;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998847;PAO=0;PQA=0;PQR=0;PRO=0;QA=1566;QR=34757;RO=867;RPL=0;RPP=87.6977;RPPR=1885.68;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=867;SRP=1885.68;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:107:107,0:107:4282:0:0:0,-32.2102,-385.332 0/0:155:155,0:155:6219:0:0:0,-46.6596,-559.447 0/0:119:119,0:119:4793:0:0:0,-35.8226,-431.248 0/0:193:193,0:193:7710:0:0:0,-58.0988,-693.484 0/1:167:144,23:144:5779:23:919:-32.7421,0,-469.629 0/1:165:149,16:149:5974:16:647:-8.89357,0,-487.765 dDocent_Contig_6340 48 . T C 8442.16 . AB=0.57764;ABP=28.2992;AC=6;AF=0.5;AN=12;AO=279;CIGAR=1X;DP=483;DPB=483;DPRA=0;EPP=608.851;EPPR=445.991;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11107;QR=8192;RO=204;RPL=0;RPP=608.851;RPPR=445.991;RPR=279;RUN=1;SAF=279;SAP=608.851;SAR=0;SRF=204;SRP=445.991;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:116:46,70:46:1821:70:2787:-216.023,0,-129.175 0/1:124:89,35:89:3563:35:1375:-86.6667,0,-283.364 0/1:48:20,28:20:815:28:1136:-88.069,0,-59.2143 0/1:83:23,60:23:940:60:2401:-191.24,0,-59.9132 0/1:82:13,69:13:527:69:2746:-222.568,0,-23.0921 0/1:30:13,17:13:526:17:662:-50.8717,0,-38.6561 dDocent_Contig_6341 1 . N G 155.794 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=161;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:80:-7.59157,-0.60206,0 dDocent_Contig_6342 13 . T C 3383.94 . AB=0.191734;ABP=721.937;AC=3;AF=0.25;AN=12;AO=214;CIGAR=1X;DP=1793;DPB=1793;DPRA=0;EPP=467.705;EPPR=3431.77;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8636;QR=63261;RO=1579;RPL=0;RPP=467.705;RPPR=3431.77;RPR=214;RUN=1;SAF=214;SAP=467.705;SAR=0;SRF=1579;SRP=3431.77;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:247:237,10:237:9492:10:410:0,-37.0938,-816.413 0/0:346:321,25:321:12822:25:1013:0,-12.6936,-1061.59 0/1:256:228,28:228:9142:28:1135:-25.3651,0,-745.142 0/0:329:317,12:317:12718:12:487:0,-54.8589,-1099.5 0/1:271:230,41:230:9238:41:1652:-67.3246,0,-749.253 0/1:344:246,98:246:9849:98:3939:-250.926,0,-782.228 dDocent_Contig_6344 98 . N G 193.138 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=205;QR=0;RO=0;RPL=7;RPP=18.2106;RPPR=0;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:67:-6.25192,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:138:-12.7604,-1.20412,0 ./.:.:.:.:.:.:.:. dDocent_Contig_6345 1 . N G 356.903 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=10;CIGAR=1X;DP=10;DPB=10;DPRA=0;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=385;QR=0;RO=0;RPL=0;RPP=24.725;RPPR=0;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:6:0,6:0:0:6:228:-20.8812,-1.80618,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:157:-14.5079,-1.20412,0 ./.:.:.:.:.:.:.:. dDocent_Contig_6346 60 . C T 2710.18 . AB=0.180824;ABP=1055.11;AC=3;AF=0.25;AN=12;AO=247;CIGAR=1X;DP=2285;DPB=2285;DPRA=1.00131;EPP=539.364;EPPR=4413.27;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999508;PAO=0;PQA=0;PQR=0;PRO=0;QA=8044;QR=77650;RO=2031;RPL=247;RPP=539.364;RPPR=4413.27;RPR=0;RUN=1;SAF=247;SAP=539.364;SAR=0;SRF=2031;SRP=4413.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:289:226,60:226:8657:60:1994:-93.524,0,-692.586 0/1:505:418,86:418:15821:86:2846:-104.278,0,-1270.82 0/1:395:326,69:326:12566:69:2190:-78.4384,0,-1011.31 0/0:335:300,32:300:11568:32:1014:0,-8.70039,-948.957 0/0:362:362,0:362:13775:0:0:0,-108.973,-1238.95 0/0:399:399,0:399:15263:0:0:0,-120.111,-1372.73 dDocent_Contig_6347 98 . N A 174.609 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=172;QR=0;RO=0;RPL=7;RPP=18.2106;RPPR=0;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:28:-2.79973,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:3:0,3:0:0:3:68:-6.3457,-0.90309,0 dDocent_Contig_6348 18 . A C 190.153 . AB=0.119318;ABP=224.55;AC=2;AF=0.166667;AN=12;AO=33;CIGAR=1X;DP=610;DPB=610;DPRA=0.97343;EPP=74.6689;EPPR=1255.95;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.97747;PAO=0;PQA=0;PQR=0;PRO=0;QA=1308;QR=22994;RO=577;RPL=0;RPP=74.6689;RPPR=1255.95;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=577;SRP=1255.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:96:86,10:86:3422:10:386:-6.18361,0,-279.122 0/0:115:108,7:108:4309:7:284:0,-8.68445,-361.837 0/1:80:69,11:69:2774:11:442:-16.0536,0,-225.682 0/0:112:107,5:107:4231:5:196:0,-15.7023,-362.734 0/0:111:111,0:111:4448:0:0:0,-33.4143,-400.254 0/0:96:96,0:96:3810:0:0:0,-28.8989,-342.902 dDocent_Contig_6349 28 . G A 103.762 . AB=0.118182;ABP=142.3;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=283;DPB=283;DPRA=1.4188;EPP=39.9253;EPPR=489.028;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=58.0752;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.958647;PAO=0;PQA=0;PQR=0;PRO=0;QA=675;QR=10441;RO=266;RPL=0;RPP=39.9253;RPPR=580.622;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=255;SRP=489.028;SRR=11;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:13,3:13:489:3:111:-5.53473,0,-39.5197 0/0:31:31,0:31:1212:0:0:0,-9.33193,-104.481 0/0:42:42,0:42:1648:0:0:0,-12.6433,-144.131 0/0:44:44,0:44:1744:0:0:0,-13.2453,-147.352 0/1:94:84,10:84:3281:10:400:-8.06324,0,-262.194 0/0:56:52,4:52:2067:4:164:0,-1.70778,-171.07 dDocent_Contig_6350 34 . T A 617.48 . AB=0.272727;ABP=47.4268;AC=1;AF=0.0833333;AN=12;AO=36;CIGAR=1X;DP=1209;DPB=1209;DPRA=0.97549;EPP=81.1833;EPPR=2547.98;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.959898;PAO=0;PQA=0;PQR=0;PRO=0;QA=1392;QR=46735;RO=1172;RPL=0;RPP=81.1833;RPPR=2547.98;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=1172;SRP=2547.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:147:147,0:147:5892:0:0:0,-44.2514,-530.063 0/0:240:240,0:240:9575:0:0:0,-72.2472,-861.158 0/0:271:270,1:270:10763:1:41:0,-77.4846,-963.855 0/0:225:225,0:225:8944:0:0:0,-67.7317,-804.441 0/0:227:218,8:218:8666:8:320:0,-39.2479,-750.286 0/1:99:72,27:72:2895:27:1031:-63.2709,0,-230.845 dDocent_Contig_6351 15 . T C 944.675 . AB=0.160221;ABP=366.018;AC=5;AF=0.416667;AN=12;AO=60;CIGAR=1X;DP=461;DPB=461;DPRA=0;EPP=133.299;EPPR=873.771;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995012;PAO=0;PQA=0;PQR=0;PRO=0;QA=2416;QR=15880;RO=401;RPL=0;RPP=133.299;RPPR=873.771;RPR=60;RUN=1;SAF=60;SAP=133.299;SAR=0;SRF=401;SRP=873.771;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:56:50,6:50:1954:6:245:-5.57179,0,-159.2 0/0:99:97,2:97:3853:2:73:0,-22.8719,-339.857 0/1:46:41,5:41:1625:5:205:-4.98763,0,-132.641 0/1:66:60,6:60:2366:6:244:-2.47085,0,-193.241 0/1:97:77,20:77:3056:20:794:-42.5762,0,-245.926 0/1:97:76,21:76:3026:21:855:-48.059,0,-243.232 dDocent_Contig_6352 19 . A G 6579.32 . AB=0.194198;ABP=1374.92;AC=2;AF=0.166667;AN=12;AO=349;CIGAR=1X;DP=4756;DPB=4756;DPRA=0.98811;EPP=760.854;EPPR=9561.83;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999773;PAO=0;PQA=0;PQR=0;PRO=0;QA=13819;QR=173869;RO=4402;RPL=0;RPP=760.854;RPPR=9561.83;RPR=349;RUN=1;SAF=349;SAP=760.854;SAR=0;SRF=4402;SRP=9561.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:716:714,0:714:28221:0:0:0,-214.935,-2537.09 0/0:882:881,0:881:34896:0:0:0,-265.207,-3137.15 0/0:701:697,4:697:27638:4:158:0,-196.423,-2470.42 0/0:768:750,17:750:29602:17:661:0,-171.472,-2601.85 0/1:925:794,131:794:31235:131:5183:-187.894,0,-2530.05 0/1:764:566,197:566:22277:197:7817:-473.26,0,-1773.27 dDocent_Contig_6353 30 . A T 1201.96 . AB=0.0806452;ABP=97.7145;AC=0;AF=0;AN=12;AO=5;CIGAR=1M1X9M;DP=237;DPB=185.455;DPRA=0;EPP=13.8677;EPPR=369.989;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.846154;PAO=0;PQA=0;PQR=0;PRO=0;QA=191;QR=6558;RO=169;RPL=0;RPP=13.8677;RPPR=369.989;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=169;SRP=369.989;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:34:17,17,0:17:636:17,0:612,0:-45.1729,0,-47.3324,-50.2904,-52.4499,-102.373 0|0:49:30,19,0:30:1160:19,0:649,0:-43.9632,0,-89.9381,-52.9941,-95.6577,-148.293 0|0:47:34,13,0:34:1322:13,0:473,0:-28.7578,0,-105.109,-38.9928,-109.023,-147.645 0|0:34:24,6,4:24:931:6,4:203,150:-9.20951,0,-74.6949,-4.13474,-64.218,-79.4601 0|0:28:24,3,1:24:940:3,1:102,41:-0.996654,0,-76.3735,-4.8199,-73.8918,-81.8586 0|0:45:40,5,0:40:1569:5,0:172,0:-2.27033,0,-127.916,-14.3115,-129.421,-143.384 dDocent_Contig_6354 13 . C G 57.488 . AB=0.101852;ABP=151.716;AC=3;AF=0.25;AN=12;AO=11;CIGAR=1X;DP=228;DPB=228;DPRA=0.9;EPP=26.8965;EPPR=472.048;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=448;QR=8703;RO=216;RPL=0;RPP=26.8965;RPPR=472.048;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=216;SRP=472.048;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:348:0:0:0,-2.70927,-31.6723 0/0:10:10,0:10:407:0:0:0,-3.0103,-36.9906 0/1:14:11,3:11:439:3:123:-7.25037,0,-35.648 0/1:21:19,2:19:768:2:82:-1.45805,0,-63.1175 0/0:101:101,0:101:4073:0:0:0,-30.404,-366.524 0/1:73:66,6:66:2668:6:243:-0.16506,0,-218.142 dDocent_Contig_6355 12 . T G 17227.8 . AB=0.218513;ABP=2456.53;AC=5;AF=0.416667;AN=12;AO=810;CIGAR=1X;DP=4234;DPB=4234;DPRA=0;EPP=1761.9;EPPR=7438.13;GTI=0;LEN=1;MEANALT=1;MQM=59.9926;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999708;PAO=0;PQA=0;PQR=0;PRO=0;QA=32423;QR=137666;RO=3424;RPL=0;RPP=1761.9;RPPR=7438.13;RPR=810;RUN=1;SAF=810;SAP=1761.9;SAR=0;SRF=3424;SRP=7438.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:669:638,31:638:25653:31:1240:0,-89.5164,-2194.52 0/1:714:586,128:586:23525:128:5146:-248.055,0,-1900.2 0/1:573:491,82:491:19834:82:3263:-121.241,0,-1610.79 0/1:642:467,175:467:18691:175:7020:-438.186,0,-1487.34 0/1:890:664,226:664:26673:226:9059:-546.835,0,-2130.15 0/1:746:578,168:578:23290:168:6695:-377.687,0,-1869.4 dDocent_Contig_6356 69 . A C 205.288 . AB=0.13913;ABP=133.091;AC=1;AF=0.0833333;AN=12;AO=24;CIGAR=1X;DP=522;DPB=522;DPRA=1.60484;EPP=55.1256;EPPR=1084.4;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.916667;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=946;QR=19182;RO=498;RPL=24;RPP=55.1256;RPPR=1084.4;RPR=0;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=498;SRP=1084.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:60:57,3:57:2192:3:116:0,-7.24481,-186.647 0/0:74:73,1:73:2843:1:41:0,-18.1817,-251.906 0/0:54:54,0:54:2090:0:0:0,-16.2556,-188.292 0/0:70:70,0:70:2682:0:0:0,-21.0721,-241.531 0/1:115:99,16:99:3780:16:626:-22.0517,0,-305.618 0/0:149:145,4:145:5595:4:163:0,-29.795,-488.382 dDocent_Contig_6357 98 . N C 295.041 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=305;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:5:0,5:0:0:5:167:-15.3588,-1.50515,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6358 38 . C G 204.225 . AB=0.115044;ABP=293.911;AC=2;AF=0.166667;AN=12;AO=40;CIGAR=1X;DP=744;DPB=744;DPRA=1.06962;EPP=89.8692;EPPR=1531.73;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.95;PAIREDR=0.990057;PAO=0;PQA=0;PQR=0;PRO=0;QA=1521;QR=27718;RO=704;RPL=0;RPP=89.8692;RPPR=1531.73;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=704;SRP=1531.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:123:107,16:107:4214:16:633:-20.2805,0,-342.238 0/0:171:166,5:166:6533:5:192:0,-33.8268,-570.101 0/1:103:93,10:93:3697:10:378:-3.3607,0,-301.756 0/0:110:101,9:101:3939:9:318:0,-4.16464,-325.58 0/0:114:114,0:114:4456:0:0:0,-34.3174,-401.021 0/0:123:123,0:123:4879:0:0:0,-37.0267,-439.036 dDocent_Contig_6359 31 . C G 3661.17 . AB=0.208778;ABP=624.008;AC=3;AF=0.25;AN=12;AO=176;CIGAR=1X;DP=1312;DPB=1312;DPRA=1.79744;EPP=385.189;EPPR=2467.63;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6941;QR=44906;RO=1135;RPL=0;RPP=385.189;RPPR=2467.63;RPR=176;RUN=1;SAF=176;SAP=385.189;SAR=0;SRF=1135;SRP=2467.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:291:195,96:195:7656:96:3796:-254.062,0,-601.086 0/0:232:232,0:232:9168:0:0:0,-69.839,-824.589 0/1:202:173,28:173:6895:28:1117:-39.9185,0,-559.34 0/1:350:298,52:298:11794:52:2028:-77.3591,0,-955.292 0/0:110:110,0:110:4356:0:0:0,-33.1133,-392.005 0/0:127:127,0:127:5037:0:0:0,-38.2308,-453.228 dDocent_Contig_6360 59 . A G 425.505 . AB=0.152174;ABP=196.366;AC=4;AF=0.333333;AN=12;AO=29;CIGAR=1X;DP=272;DPB=272;DPRA=1.03636;EPP=65.983;EPPR=530.678;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.987654;PAO=0;PQA=0;PQR=0;PRO=0;QA=1173;QR=9431;RO=243;RPL=29;RPP=65.983;RPPR=530.678;RPR=0;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=243;SRP=530.678;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:44,0:44:1721:0:0:0,-13.2453,-155.125 0/1:50:43,7:43:1664:7:284:-10.8825,0,-134.944 0/0:44:43,1:43:1652:1:40:0,-9.24964,-144.929 0/1:49:45,4:45:1758:4:163:-0.307958,0,-143.706 0/1:39:35,4:35:1363:4:160:-3.04275,0,-111.203 0/1:46:33,13:33:1273:13:526:-33.8391,0,-100.998 dDocent_Contig_6362 19 . T C 26918.7 . AB=0.348821;ABP=575.532;AC=6;AF=0.5;AN=12;AO=1006;CIGAR=1X;DP=2884;DPB=2884;DPRA=0;EPP=2187.51;EPPR=4081.04;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999006;PAIREDR=0.997338;PAO=0;PQA=0;PQR=0;PRO=0;QA=39698;QR=73612;RO=1878;RPL=0;RPP=2187.51;RPPR=4081.04;RPR=1006;RUN=1;SAF=1006;SAP=2187.51;SAR=0;SRF=1878;SRP=4081.04;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:610:446,164:446:17547:164:6441:-395.835,0,-1394.36 0/1:604:464,140:464:18234:140:5543:-316.896,0,-1457.91 0/1:368:290,78:290:11370:78:3090:-167.408,0,-911.846 0/1:489:373,116:373:14593:116:4617:-268.251,0,-1165.2 0/1:383:87,296:87:3388:296:11597:-927.689,0,-189.706 0/1:430:218,212:218:8480:212:8410:-627.009,0,-633.352 dDocent_Contig_6363 21 . G A 69016.9 . AB=0.805185;ABP=2187.27;AC=6;AF=0.5;AN=12;AO=2174;CIGAR=1X;DP=2700;DPB=2700;DPRA=0;EPP=4723.79;EPPR=1145.2;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=85910;QR=21009;RO=526;RPL=0;RPP=4723.79;RPPR=1145.2;RPR=2174;RUN=1;SAF=2174;SAP=4723.79;SAR=0;SRF=526;SRP=1145.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:353:43,310:43:1725:310:12253:-995.679,0,-49.2013 0/1:496:127,369:127:5075:369:14603:-1163.89,0,-307.299 0/1:342:68,274:68:2735:274:10780:-866.564,0,-143.304 0/1:402:71,331:71:2830:331:13081:-1055.36,0,-133.778 0/1:560:109,451:109:4334:451:17844:-1436,0,-221.411 0/1:547:108,439:108:4310:439:17349:-1395.42,0,-223.176 dDocent_Contig_6364 50 . T C 15043.9 . AB=0.565114;ABP=33.8338;AC=7;AF=0.583333;AN=12;AO=473;CIGAR=1X2M;DP=837;DPB=837;DPRA=0;EPP=1030.12;EPPR=580.622;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.993658;PAIREDR=0.988722;PAO=0;PQA=0;PQR=0;PRO=0;QA=18827;QR=10562;RO=266;RPL=473;RPP=1030.12;RPPR=580.622;RPR=0;RUN=1;SAF=473;SAP=1030.12;SAR=0;SRF=266;SRP=580.622;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:131:36,9,86:36:1411:9,86:359,3407:-269.553,-250.824,-364.133,0,-86.4466,-90.1252 0|1:164:27,15,121:27:1071:15,121:569,4804:-387.315,-348.799,-432.442,0,-41.5291,-51.744 0|1:94:16,2,76:16:623:2,76:79,3045:-246.034,-244.35,-294.937,0,-44.6845,-28.3078 1|1:146:14,28,104:14:549:28,104:1103,4135:-381.794,-295.274,-331.989,-45.5925,0,-59.4293 0|1:136:79,25,32:79:3168:25,32:1006,1279:-81.5588,-22.4305,-275.918,0,-178.102,-251.378 0|1:166:94,18,54:94:3740:18,54:716,2157:-149.354,-118.7,-421.208,0,-248.976,-291.672 dDocent_Contig_6365 15 . C G 5889.78 . AB=0.157558;ABP=2388.49;AC=5;AF=0.416667;AN=12;AO=377;CIGAR=1X;DP=2742;DPB=2742;DPRA=0;EPP=821.655;EPPR=5103.8;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999574;PAO=0;PQA=0;PQR=0;PRO=0;QA=14762;QR=92687;RO=2349;RPL=0;RPP=821.655;RPPR=5103.8;RPR=377;RUN=1;SAF=377;SAP=821.655;SAR=0;SRF=2349;SRP=5103.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:382:331,50:331:13085:50:1927:-58.6902,0,-1061.81 0/1:524:444,79:444:17491:79:3128:-123.899,0,-1415.18 0/1:478:422,47:422:16733:47:1841:-24.3393,0,-1363.11 0/1:571:421,150:421:16524:150:5860:-355.327,0,-1314.06 0/1:387:341,43:341:13476:43:1685:-35.9435,0,-1095.97 0/0:400:390,8:390:15378:8:321:0,-90.9484,-1353.62 dDocent_Contig_6366 32 . T A 293.539 . AB=0.147287;ABP=142.405;AC=1;AF=0.0833333;AN=12;AO=27;CIGAR=1X;DP=850;DPB=850;DPRA=1.13568;EPP=61.6401;EPPR=1790.13;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1096;QR=32896;RO=823;RPL=0;RPP=61.6401;RPPR=1790.13;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=823;SRP=1790.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:183:180,3:180:7208:3:121:0,-43.8083,-637.082 0/0:142:142,0:142:5688:0:0:0,-42.7463,-511.728 0/0:118:118,0:118:4695:0:0:0,-35.5215,-422.447 0/0:140:135,5:135:5416:5:204:0,-23.4002,-468.522 0/1:129:110,19:110:4383:19:771:-30.8767,0,-355.581 0/0:138:138,0:138:5506:0:0:0,-41.5421,-495.353 dDocent_Contig_6367 107 . N A 139.292 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=138;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 dDocent_Contig_6368 98 . N A 4710.18 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=165;CIGAR=1X;DP=167;DPB=167;DPRA=0;EPP=361.303;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=2.1684e-19;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5207;QR=0;RO=0;RPL=165;RPP=361.303;RPPR=0;RPR=0;RUN=1;SAF=165;SAP=361.303;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:9:0,9:0:0:9:283:-25.7768,-2.70927,0 1/1:12:0,12:0:0:12:306:-27.7864,-3.61236,0 1/1:11:0,11:0:0:11:338:-30.7182,-3.31133,0 1/1:29:0,29:0:0:29:929:-83.9008,-8.72987,0 1/1:55:0,55:0:0:55:1782:-160.651,-16.5567,0 1/1:51:0,49:0:0:49:1569:-141.406,-14.7505,0 dDocent_Contig_6370 16 . T C 54390.7 . AB=0.737973;ABP=1148.13;AC=6;AF=0.5;AN=12;AO=1718;CIGAR=1X;DP=2328;DPB=2328;DPRA=0;EPP=3733.6;EPPR=1325.44;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.9959;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=68397;QR=24497;RO=609;RPL=0;RPP=3733.6;RPPR=1325.44;RPR=1718;RUN=1;SAF=1718;SAP=3733.6;SAR=0;SRF=609;SRP=1325.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:304:67,237:67:2682:237:9438:-757.341,0,-149.984 0/1:374:113,261:113:4537:261:10273:-811.342,0,-295.652 0/1:479:166,312:166:6685:312:12415:-972.363,0,-457.253 0/1:337:134,203:134:5394:203:8062:-623.691,0,-383.836 0/1:475:74,401:74:3000:401:16016:-1297.15,0,-127.085 0/1:359:55,304:55:2199:304:12193:-988.413,0,-90.0023 dDocent_Contig_6371 36 . G A 88447.9 . AB=0.597629;ABP=401.146;AC=6;AF=0.5;AN=12;AO=2874;CIGAR=1X;DP=4809;DPB=4809;DPRA=0;EPP=6243.82;EPPR=4200.47;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=114587;QR=76776;RO=1933;RPL=0;RPP=6243.82;RPPR=4200.47;RPR=2874;RUN=1;SAF=2874;SAP=6243.82;SAR=0;SRF=1933;SRP=4200.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:646:288,358:288:11354:358:14268:-1088.57,0,-826.629 0/1:817:213,604:213:8429:604:24116:-1922.4,0,-512.178 0/1:488:245,243:245:9757:243:9749:-729.883,0,-730.614 0/1:468:204,264:204:8140:264:10519:-805.134,0,-591.254 0/1:1278:613,665:613:24445:665:26454:-1993.81,0,-1813.17 0/1:1112:370,740:370:14651:740:29481:-2316.22,0,-983.05 dDocent_Contig_6372 50 . A G 46.0703 . AB=0.115942;ABP=91.4113;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=269;DPB=269;DPRA=1.725;EPP=20.3821;EPPR=569.765;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=295;QR=10307;RO=261;RPL=8;RPP=20.3821;RPPR=569.765;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=261;SRP=569.765;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:50,0:50:1974:0:0:0,-15.0515,-177.866 0/0:30:30,0:30:1171:0:0:0,-9.0309,-105.672 0/0:71:71,0:71:2823:0:0:0,-21.3731,-254.178 0/0:41:41,0:41:1630:0:0:0,-12.3422,-146.932 0/1:69:61,8:61:2383:8:295:-6.1299,0,-193.854 0/0:8:8,0:8:326:0:0:0,-2.40824,-29.7099 dDocent_Contig_6373 98 . N G 393.433 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=17;CIGAR=1X;DP=17;DPB=17;DPRA=0;EPP=39.9253;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=421;QR=0;RO=0;RPL=17;RPP=39.9253;RPPR=0;RPR=0;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:120:-11.097,-1.20412,0 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:86:-7.91115,-1.50515,0 1/1:7:0,7:0:0:7:208:-19.0113,-2.10721,0 dDocent_Contig_6374 13 . T C 170.615 . AB=0.183673;ABP=45.5977;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=282;DPB=282;DPRA=1.27419;EPP=33.4109;EPPR=584.965;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.492537;PAO=0;PQA=0;PQR=0;PRO=0;QA=565;QR=10767;RO=268;RPL=0;RPP=33.4109;RPPR=584.965;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=268;SRP=584.965;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:49:40,9:40:1606:9:363:-18.2833,0,-130.017 0/0:58:56,2:56:2245:2:82:0,-9.68006,-194.431 0/0:28:28,0:28:1121:0:0:0,-8.42884,-101.172 0/0:51:48,3:48:1914:3:120:0,-4.16522,-161.269 0/0:51:51,0:51:2062:0:0:0,-15.3525,-185.757 0/0:45:45,0:45:1819:0:0:0,-13.5463,-163.915 dDocent_Contig_6375 62 . A G 822.56 . AB=0.12;ABP=880.98;AC=2;AF=0.166667;AN=12;AO=144;CIGAR=1X;DP=2112;DPB=2112;DPRA=0;EPP=315.702;EPPR=4274.3;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5659;QR=77898;RO=1967;RPL=144;RPP=315.702;RPPR=4274.3;RPR=0;RUN=1;SAF=144;SAP=315.702;SAR=0;SRF=1967;SRP=4274.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:261:254,7:254:10062:7:285:0,-52.5444,-878.946 0/0:405:383,22:383:15074:22:859:0,-44.3043,-1277.96 0/0:383:366,17:366:14547:17:685:0,-53.3139,-1246.16 0/0:363:348,14:348:13891:14:544:0,-59.9871,-1199.86 0/1:371:326,45:326:12905:45:1761:-47.0225,0,-1048.87 0/1:329:290,39:290:11419:39:1525:-38.4553,0,-927.923 dDocent_Contig_6376 107 . N G 102.593 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=103;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_6377 14 . G C 159.333 . AB=0.142857;ABP=96.0734;AC=3;AF=0.25;AN=12;AO=12;CIGAR=1X;DP=156;DPB=156;DPRA=1.16667;EPP=29.068;EPPR=315.702;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.416667;PAIREDR=0.756944;PAO=0;PQA=0;PQR=0;PRO=0;QA=483;QR=5555;RO=144;RPL=0;RPP=29.068;RPPR=315.702;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=144;SRP=315.702;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:987:0:0:0,-7.52575,-89.133 0/1:34:30,4:30:1177:4:163:-4.82341,0,-95.9792 0/1:26:20,6:20:742:6:242:-14.3305,0,-59.2566 0/1:24:22,2:22:840:2:78:-0.178057,0,-68.6828 0/0:27:27,0:27:1030:0:0:0,-8.12781,-92.9964 0/0:20:20,0:20:779:0:0:0,-6.0206,-70.4343 dDocent_Contig_6379 20 . C T 432.827 . AB=0.137652;ABP=284.695;AC=4;AF=0.333333;AN=12;AO=39;CIGAR=1X;DP=383;DPB=383;DPRA=0;EPP=87.6977;EPPR=749.997;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.55814;PAO=0;PQA=0;PQR=0;PRO=0;QA=1563;QR=13766;RO=344;RPL=0;RPP=87.6977;RPPR=749.997;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=344;SRP=749.997;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:73:72,1:72:2872:1:38:0,-18.1779,-254.793 0/1:77:67,10:67:2673:10:393:-12.5483,0,-217.514 0/1:68:59,9:59:2373:9:367:-12.9252,0,-193.248 0/1:50:45,5:45:1817:5:204:-3.69253,0,-148.686 0/0:63:59,4:59:2342:4:154:0,-4.73457,-196.707 0/1:52:42,10:42:1689:10:407:-21.337,0,-136.578 dDocent_Contig_6380 47 . T A 14664 . AB=0.304325;ABP=633.566;AC=4;AF=0.333333;AN=12;AO=596;CIGAR=1X;DP=2683;DPB=2683;DPRA=0;EPP=1297.21;EPPR=4534.87;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=23474;QR=82368;RO=2087;RPL=0;RPP=1297.21;RPPR=4534.87;RPR=596;RUN=1;SAF=596;SAP=1297.21;SAR=0;SRF=2087;SRP=4534.87;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:460:300,160:300:11838:160:6281:-426.601,0,-926.177 0/1:641:520,121:520:20565:121:4779:-237.086,0,-1656.25 0/1:421:314,107:314:12373:107:4253:-256.01,0,-985.995 0/1:374:185,189:185:7318:189:7409:-553.922,0,-545.703 0/0:479:466,13:466:18331:13:510:0,-97.9488,-1602.14 0/0:308:302,6:302:11943:6:242:0,-70.5597,-1051.94 dDocent_Contig_6381 10 . C T 988.589 . AB=0.120623;ABP=966.865;AC=1;AF=0.0833333;AN=12;AO=167;CIGAR=1X;DP=5437;DPB=5437;DPRA=0.889826;EPP=365.646;EPPR=11442.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997532;PAO=0;PQA=0;PQR=0;PRO=0;QA=6604;QR=209537;RO=5268;RPL=0;RPP=365.646;RPPR=11442.3;RPR=167;RUN=1;SAF=167;SAP=365.646;SAR=0;SRF=5268;SRP=11442.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:693:677,16:677:26766:16:641:0,-150.59,-2348.62 0/0:1092:1061,31:1061:42312:31:1210:0,-219.558,-3694.95 0/1:771:678,93:678:27079:93:3694:-100.382,0,-2202.6 0/0:925:898,27:898:35725:27:1059:0,-182.862,-3116.39 0/0:1045:1043,0:1043:41422:0:0:0,-313.974,-3723.89 0/0:911:911,0:911:36233:0:0:0,-274.238,-3257.65 dDocent_Contig_6382 34 . C T 95.4549 . AB=0.109091;ABP=149.012;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=540;DPB=540;DPRA=1.10345;EPP=35.5824;EPPR=1143.03;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.933333;PAIREDR=0.895238;PAO=0;PQA=0;PQR=0;PRO=0;QA=609;QR=21032;RO=525;RPL=0;RPP=35.5824;RPPR=1143.03;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=525;SRP=1143.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:75:75,0:75:3013:0:0:0,-22.5772,-271.252 0/0:80:80,0:80:3228:0:0:0,-24.0824,-290.572 0/0:82:79,3:79:3113:3:122:0,-13.312,-268.864 0/0:98:98,0:98:3925:0:0:0,-29.5009,-353.236 0/0:95:95,0:95:3807:0:0:0,-28.5978,-342.627 0/1:110:98,12:98:3946:12:487:-11.0684,0,-322.003 dDocent_Contig_6383 12 . G A 31136.4 . AB=0.0175953;ABP=2070.83;AC=6;AF=0.5;AN=12;AO=18;CIGAR=2X2M1X2M1X1M2X1M1X;DP=2255;DPB=2254.08;DPRA=0;EPP=42.0968;EPPR=1820.53;GTI=0;LEN=1;MEANALT=16.6667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.983274;PAO=0;PQA=0;PQR=0;PRO=0;QA=688;QR=31897;RO=837;RPL=0;RPP=42.0968;RPPR=1820.53;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=837;SRP=1820.53;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:286:151,11,95,2:151:5758:11,95,2:419,3684,80:-256.203,-267.418,-736.446,0,-438.1,-443.743,-295.069,-733.167,-465.75,-766.806 0|1:379:183,30,139,0:183:6940:30,139,0:1180,5444,0:-391.412,-349.433,-909.416,0,-471.949,-527.174,-446.5,-918.447,-569.017,-1015.51 0|1:201:80,15,69,15:80:3043:15,69,15:590,2684,575:-195.2,-170.801,-415.85,0,-201.081,-228.792,-172.093,-373.175,-202.373,-417.141 0|1:536:187,46,264,1:187:7092:46,264,1:1788,10283,33:-783.263,-692.882,-1260.52,0,-434.82,-502.023,-836.887,-1271.7,-578.826,-1418.07 0|1:522:129,37,322,0:129:4977:37,322,0:1430,12590,0:-990.85,-912.267,-1309.84,0,-291.294,-311.778,-1029.68,-1320.98,-408.71,-1438.39 0|1:331:107,23,169,0:107:4087:23,169,0:888,6592,0:-507.938,-467.536,-795.92,0,-262.699,-284.438,-540.148,-802.844,-335.312,-875.456 dDocent_Contig_6384 98 . N T 126.824 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=124;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 1/1:1:0,1:0:0:1:36:-3.59827,-0.30103,0 1/1:1:0,1:0:0:1:12:-1.19999,-0.30103,0 dDocent_Contig_6385 124 . C A 791.305 . AB=0.167082;ABP=389.05;AC=3;AF=0.25;AN=12;AO=78;CIGAR=1X;DP=731;DPB=731;DPRA=0;EPP=172.385;EPPR=1418.81;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2646;QR=21843;RO=652;RPL=0;RPP=172.385;RPPR=1418.81;RPR=78;RUN=1;SAF=0;SAP=172.385;SAR=78;SRF=0;SRP=1418.81;SRR=652;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:99:98,1:98:3248:1:35:0,-26.3033,-289.055 0/0:131:126,4:126:4188:4:140:0,-26.3149,-364.233 0/0:100:94,6:94:3148:6:203:0,-11.5009,-264.954 0/1:120:103,17:103:3486:17:579:-16.3091,0,-277.846 0/1:152:128,24:128:4259:24:797:-26.282,0,-337.755 0/1:129:103,26:103:3514:26:892:-41.7612,0,-277.652 dDocent_Contig_6386 98 . N A 461.295 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=16;CIGAR=1X;DP=17;DPB=17;DPRA=0;EPP=37.7539;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=486;QR=0;RO=0;RPL=16;RPP=37.7539;RPPR=0;RPR=0;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:53:-5.03393,-0.60206,0 1/1:4:0,4:0:0:4:129:-11.9295,-1.20412,0 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 1/1:4:0,4:0:0:4:132:-12.2064,-1.20412,0 1/1:3:0,2:0:0:2:65:-6.01847,-0.60206,0 1/1:2:0,2:0:0:2:38:-3.60948,-0.60206,0 dDocent_Contig_6387 98 . N T 157.694 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0.333333;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=161;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 1/1:2:0,2:0:0:2:32:-3.03987,-0.60206,0 1/1:2:0,2:0:0:2:60:-5.69857,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6388 36 . A G 3563.05 . AB=0.12798;ABP=2877.27;AC=4;AF=0.333333;AN=12;AO=306;CIGAR=1X;DP=4194;DPB=4194;DPRA=0.663062;EPP=667.481;EPPR=8441.35;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=12032;QR=152524;RO=3886;RPL=0;RPP=667.481;RPPR=8441.35;RPR=306;RUN=1;SAF=306;SAP=667.481;SAR=0;SRF=3886;SRP=8441.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:673:552,121:552:21619:121:4769:-226.559,0,-1741.43 0/1:654:575,79:575:22513:79:3126:-84.5511,0,-1827.5 0/1:526:478,48:478:18832:48:1876:-10.7103,0,-1535.09 0/1:538:480,58:480:18824:58:2261:-41.7061,0,-1530.76 0/0:1064:1062,0:1062:41658:0:0:0,-319.694,-3745.48 0/0:739:739,0:739:29078:0:0:0,-222.461,-2614.54 dDocent_Contig_6389 1 . N G 114.653 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:123:-11.4648,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6390 29 . A T 22136.3 . AB=0.213453;ABP=3491.22;AC=5;AF=0.416667;AN=12;AO=1078;CIGAR=1X;DP=5548;DPB=5548;DPRA=0;EPP=2343.86;EPPR=9694.29;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=42379;QR=177269;RO=4463;RPL=0;RPP=2343.86;RPPR=9694.29;RPR=1078;RUN=1;SAF=1078;SAP=2343.86;SAR=0;SRF=4463;SRP=9694.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:771:685,85:685:27193:85:3341:-68.8666,0,-2213.13 0/1:1031:894,136:894:35458:136:5352:-171.381,0,-2877.88 0/0:657:623,34:623:24767:34:1306:0,-79.9765,-2109.1 0/1:879:763,115:763:30374:115:4583:-147.696,0,-2466.26 0/1:1116:768,345:768:30441:345:13554:-883.475,0,-2401.53 0/1:1094:730,363:730:29036:363:14243:-951.436,0,-2281.23 dDocent_Contig_6391 98 . N T 403.429 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=13;CIGAR=2X;DP=13;DPB=19;DPRA=0;EPP=31.2394;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=13.6161;PAIRED=1;PAIREDR=0;PAO=5;PQA=146;PQR=0;PRO=0;QA=448;QR=0;RO=0;RPL=13;RPP=31.2394;RPPR=0;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:13:0,13:0:0:13:448:-40.3429,-3.91339,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_6392 13 . A T 293.33 . AB=0.133663;ABP=238.475;AC=1;AF=0.0833333;AN=12;AO=35;CIGAR=3X2M1X;DP=862;DPB=862;DPRA=2.1244;EPP=79.0118;EPPR=1798.82;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.997582;PAO=0;PQA=0;PQR=0;PRO=0;QA=1317;QR=32558;RO=827;RPL=0;RPP=79.0118;RPPR=1798.82;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=827;SRP=1798.82;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:105:105,0:105:4139:0:0:0,-31.6081,-372.519 0|0:125:125,0:125:4916:0:0:0,-37.6287,-442.389 0|0:59:59,0:59:2324:0:0:0,-17.7608,-209.34 0|0:129:129,0:129:5083:0:0:0,-38.8329,-457.396 0|0:242:234,8:234:9255:8:302:0,-45.3107,-804.926 0|1:202:175,27:175:6841:27:1015:-30.8559,0,-554.655 dDocent_Contig_6393 28 . T C 272.757 . AB=0.102625;ABP=577.694;AC=1;AF=0.0833333;AN=12;AO=43;CIGAR=1X;DP=2669;DPB=2669;DPRA=0.931111;EPP=96.3836;EPPR=5703.13;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998857;PAO=0;PQA=0;PQR=0;PRO=0;QA=1719;QR=104400;RO=2625;RPL=0;RPP=96.3836;RPPR=5703.13;RPR=43;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=2625;SRP=5703.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:425:425,0:425:16916:0:0:0,-127.938,-1521.11 0/0:528:528,0:528:20979:0:0:0,-158.944,-1886.37 0/0:272:271,0:271:10755:0:0:0,-81.5791,-967.139 0/0:569:569,0:569:22592:0:0:0,-171.286,-2031.37 0/0:456:456,0:456:18152:0:0:0,-137.27,-1632.21 0/1:419:376,43:376:15006:43:1719:-28.7986,0,-1223.26 dDocent_Contig_6394 44 . G A 237.931 . AB=0.141667;ABP=136.845;AC=1;AF=0.0833333;AN=12;AO=32;CIGAR=1X;DP=760;DPB=760;DPRA=1.52492;EPP=72.4974;EPPR=1583.84;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998626;PAO=0;PQA=0;PQR=0;PRO=0;QA=1275;QR=28881;RO=728;RPL=0;RPP=72.4974;RPPR=1583.84;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=728;SRP=1583.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:172:160,12:160:6291:12:473:0,-8.8573,-523.014 0/0:167:164,3:164:6513:3:123:0,-38.8072,-574.431 0/1:120:103,17:103:4123:17:679:-25.316,0,-334.902 0/0:145:145,0:145:5714:0:0:0,-43.6493,-514.065 0/0:72:72,0:72:2869:0:0:0,-21.6742,-258.304 0/0:84:84,0:84:3371:0:0:0,-25.2865,-303.431 dDocent_Contig_6395 97 . A G 607.152 . AB=0.266129;ABP=61.9202;AC=2;AF=0.166667;AN=12;AO=33;CIGAR=1X;DP=263;DPB=263;DPRA=1.78417;EPP=74.6689;EPPR=500.277;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.939394;PAIREDR=0.917031;PAO=0;PQA=0;PQR=0;PRO=0;QA=1118;QR=7448;RO=229;RPL=33;RPP=74.6689;RPPR=500.277;RPR=0;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=229;SRP=500.277;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:847:0:0:0,-7.52575,-76.5441 0/0:45:44,0:44:1446:0:0:0,-13.2453,-130.226 0/0:39:39,0:39:1258:0:0:0,-11.7402,-113.505 0/0:30:30,0:30:981:0:0:0,-9.0309,-88.5911 0/1:44:30,14:30:975:14:476:-29.9205,0,-74.8027 0/1:80:61,19:61:1941:19:642:-34.0166,0,-150.873 dDocent_Contig_6396 18 . C A 156.992 . AB=0.107759;ABP=313.044;AC=2;AF=0.166667;AN=12;AO=35;CIGAR=1X;DP=683;DPB=683;DPRA=0.987826;EPP=79.0118;EPPR=1185.38;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9938;NS=6;NUMALT=1;ODDS=0;PAIRED=0.971429;PAIREDR=0.944444;PAO=0;PQA=0;PQR=0;PRO=0;QA=1367;QR=25597;RO=648;RPL=0;RPP=79.0118;RPPR=1410.12;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=621;SRP=1185.38;SRR=27;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:115:100,15:100:3948:15:569:-16.9146,0,-320.704 0/0:121:118,3:118:4699:3:123:0,-24.9598,-411.366 0/0:109:105,4:105:4079:4:155:0,-18.489,-352.8 0/1:117:107,10:107:4185:10:398:-0.955407,0,-341.431 0/0:115:115,0:115:4627:0:0:0,-34.6184,-416.336 0/0:106:103,3:103:4059:3:122:0,-20.5367,-353.919 dDocent_Contig_6397 108 . T G 2178.53 . AB=0.333333;ABP=81.9071;AC=6;AF=0.5;AN=12;AO=109;CIGAR=1X;DP=327;DPB=327;DPRA=0;EPP=239.701;EPPR=476.391;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995413;PAO=0;PQA=0;PQR=0;PRO=0;QA=3618;QR=7370;RO=218;RPL=0;RPP=239.701;RPPR=476.391;RPR=109;RUN=1;SAF=0;SAP=239.701;SAR=109;SRF=0;SRP=476.391;SRR=218;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:26,10:26:888:10:333:-19.4562,0,-69.3971 0/1:59:45,14:45:1516:14:453:-23.3191,0,-118.968 0/1:49:31,18:31:1047:18:609:-40.3796,0,-79.7867 0/1:51:40,11:40:1365:11:376:-18.8177,0,-107.796 0/1:83:58,25:58:1939:25:831:-50.1141,0,-149.802 0/1:49:18,31:18:615:31:1016:-76.9879,0,-40.9212 dDocent_Contig_6398 23 . T A 846.631 . AB=0.132797;ABP=585.092;AC=2;AF=0.166667;AN=12;AO=113;CIGAR=1X;DP=1435;DPB=1435;DPRA=0;EPP=248.387;EPPR=2873.7;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4509;QR=52783;RO=1322;RPL=0;RPP=248.387;RPPR=2873.7;RPR=113;RUN=1;SAF=113;SAP=248.387;SAR=0;SRF=1322;SRP=2873.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:228:194,34:194:7751:34:1345:-52.679,0,-628.552 0/0:259:245,14:245:9826:14:556:0,-27.584,-833.319 0/1:269:237,32:237:9429:32:1288:-35.2059,0,-767.064 0/0:245:225,20:225:9010:20:801:0,-1.34642,-737.95 0/0:212:205,7:205:8163:7:281:0,-38.1564,-708.549 0/0:222:216,6:216:8604:6:238:0,-45.0369,-752.071 dDocent_Contig_6399 98 . N C 3187.61 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=100;CIGAR=1X;DP=102;DPB=102;DPRA=0;EPP=220.158;EPPR=0;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3515;QR=0;RO=0;RPL=100;RPP=220.158;RPPR=0;RPR=0;RUN=1;SAF=100;SAP=220.158;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:11:0,11:0:0:11:385:-34.9857,-3.31133,0 1/1:30:0,30:0:0:30:1059:-95.6219,-9.0309,0 1/1:41:0,40:0:0:40:1419:-127.688,-12.0412,0 1/1:16:0,15:0:0:15:512:-46.3256,-4.51545,0 1/1:2:0,2:0:0:2:70:-6.64733,-0.60206,0 1/1:2:0,2:0:0:2:70:-6.64733,-0.60206,0 dDocent_Contig_6400 34 . T A 36855.1 . AB=0.683362;ABP=510.274;AC=4;AF=0.333333;AN=12;AO=1187;CIGAR=1X;DP=2441;DPB=2441;DPRA=1.23366;EPP=2580.55;EPPR=2726.04;GTI=0;LEN=1;MEANALT=1;MQM=59.9832;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0.0614996;PAIREDR=0.0574163;PAO=0;PQA=0;PQR=0;PRO=0;QA=46875;QR=49936;RO=1254;RPL=0;RPP=2580.55;RPPR=2726.04;RPR=1187;RUN=1;SAF=1187;SAP=2580.55;SAR=0;SRF=1254;SRP=2726.04;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:459:50,409:50:2006:409:16124:-1311.77,0,-42.559 0/1:509:179,330:179:7128:330:13040:-1019.47,0,-487.957 0/1:357:155,202:155:6183:202:7916:-604.577,0,-448.768 0/1:412:166,246:166:6568:246:9795:-756.916,0,-466.822 0/0:346:346,0:346:13821:0:0:0,-104.156,-1242.85 0/0:358:358,0:358:14230:0:0:0,-107.769,-1279.61 dDocent_Contig_6401 24 . C T 191.144 . AB=0.145833;ABP=107.603;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=275;DPB=275;DPRA=1.07263;EPP=33.4109;EPPR=569.765;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.642857;PAIREDR=0.819923;PAO=0;PQA=0;PQR=0;PRO=0;QA=561;QR=10546;RO=261;RPL=0;RPP=33.4109;RPPR=569.765;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=261;SRP=569.765;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:29:24,5:24:964:5:203:-9.92319,0,-78.3278 0/0:44:44,0:44:1777:0:0:0,-13.2453,-160.14 0/1:67:58,9:58:2354:9:358:-12.4131,0,-191.833 0/0:41:41,0:41:1659:0:0:0,-12.3422,-149.532 0/0:36:36,0:36:1457:0:0:0,-10.8371,-131.374 0/0:58:58,0:58:2335:0:0:0,-17.4597,-210.295 dDocent_Contig_6402 11 . T G 3076.61 . AB=0.198163;ABP=606.007;AC=2;AF=0.166667;AN=12;AO=151;CIGAR=1X;DP=2090;DPB=2090;DPRA=1.14759;EPP=330.903;EPPR=4213.5;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9732;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6001;QR=77780;RO=1939;RPL=0;RPP=330.903;RPPR=4213.5;RPR=151;RUN=1;SAF=151;SAP=330.903;SAR=0;SRF=1939;SRP=4213.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:334:334,0:334:13411:0:0:0,-100.544,-1205.96 0/0:371:371,0:371:14940:0:0:0,-111.682,-1343.38 0/0:264:264,0:264:10554:0:0:0,-79.4719,-949.116 0/0:359:359,0:359:14397:0:0:0,-108.07,-1294.59 0/1:405:298,107:298:11959:107:4256:-261.08,0,-953.468 0/1:357:313,44:313:12519:44:1745:-49.803,0,-1018.25 dDocent_Contig_6403 1 . N A 3281.62 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=105;CIGAR=1X;DP=105;DPB=105;DPRA=0;EPP=231.015;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3621;QR=0;RO=0;RPL=0;RPP=231.015;RPPR=0;RPR=105;RUN=1;SAF=0;SAP=231.015;SAR=105;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:32:0,32:0:0:32:1098:-99.1238,-9.63296,0 1/1:11:0,11:0:0:11:380:-34.5313,-3.31133,0 1/1:9:0,9:0:0:9:320:-29.1425,-2.70927,0 1/1:52:0,52:0:0:52:1791:-161.466,-15.6536,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 dDocent_Contig_6404 10 . A T 594.188 . AB=0.221311;ABP=85.3127;AC=1;AF=0.0833333;AN=12;AO=42;CIGAR=1X;DP=614;DPB=614;DPRA=1.40683;EPP=94.2121;EPPR=1245.09;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.965035;PAO=0;PQA=0;PQR=0;PRO=0;QA=1690;QR=22821;RO=572;RPL=0;RPP=94.2121;RPPR=1245.09;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=572;SRP=1245.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:110:110,0:110:4399:0:0:0,-33.1133,-395.854 0/0:126:118,8:118:4714:8:325:0,-8.31014,-394.546 0/0:51:51,0:51:2058:0:0:0,-15.3525,-185.398 0/0:103:98,5:98:3919:5:201:0,-12.5356,-334.23 0/1:122:95,27:95:3709:27:1082:-60.9417,0,-297.106 0/0:102:100,2:100:4022:2:82:0,-22.9254,-354.179 dDocent_Contig_6405 107 . N A 345.558 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=11;CIGAR=1X;DP=11;DPB=11;DPRA=0;EPP=26.8965;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=358;QR=0;RO=0;RPL=0;RPP=26.8965;RPPR=0;RPR=11;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:71:-6.74206,-0.60206,0 1/1:1:0,1:0:0:1:20:-1.99996,-0.30103,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:6:0,6:0:0:6:199:-18.2357,-1.80618,0 dDocent_Contig_6406 9 . T C 22447.9 . AB=0.611964;ABP=137.703;AC=6;AF=0.5;AN=12;AO=757;CIGAR=1X;DP=1237;DPB=1237;DPRA=0;EPP=1646.81;EPPR=1043.15;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.9908;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998679;PAIREDR=0.997912;PAO=0;PQA=0;PQR=0;PRO=0;QA=29201;QR=18291;RO=479;RPL=0;RPP=1646.81;RPPR=1043.15;RPR=757;RUN=1;SAF=757;SAP=1646.81;SAR=0;SRF=479;SRP=1043.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:197:76,120:76:2911:120:4602:-355.109,0,-203.043 0/1:187:73,114:73:2795:114:4393:-339.133,0,-195.44 0/1:232:77,155:77:2935:155:5985:-468.742,0,-194.482 0/1:280:100,180:100:3799:180:6977:-543.493,0,-257.727 0/1:125:75,50:75:2867:50:1921:-135.505,0,-220.577 0/1:216:78,138:78:2984:138:5323:-414.034,0,-203.7 dDocent_Contig_6407 98 . N A 177.949 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=177;QR=0;RO=0;RPL=8;RPP=20.3821;RPPR=0;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:45:-4.27369,-0.60206,0 1/1:2:0,2:0:0:2:26:-2.46997,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 1/1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 1/1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 dDocent_Contig_6408 69 . G A 1543.98 . AB=0.222513;ABP=258.494;AC=3;AF=0.25;AN=12;AO=92;CIGAR=1X;DP=895;DPB=895;DPRA=0.772826;EPP=202.786;EPPR=1746.7;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996264;PAO=0;PQA=0;PQR=0;PRO=0;QA=3288;QR=28543;RO=803;RPL=92;RPP=202.786;RPPR=1746.7;RPR=0;RUN=1;SAF=92;SAP=202.786;SAR=0;SRF=803;SRP=1746.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:96:83,13:83:2970:13:459:-12.744,0,-238.622 0/1:177:128,49:128:4568:49:1775:-106.744,0,-357.981 0/0:138:132,6:132:4712:6:212:0,-22.1173,-404.786 0/1:109:86,23:86:3103:23:807:-40.1314,0,-246.666 0/0:191:190,1:190:6706:1:35:0,-53.9981,-600.08 0/0:184:184,0:184:6484:0:0:0,-55.3895,-583.609 dDocent_Contig_6409 20 . T G 656.961 . AB=0.247863;ABP=67.6162;AC=3;AF=0.25;AN=12;AO=34;CIGAR=1X;DP=212;DPB=212;DPRA=0;EPP=76.8404;EPPR=389.532;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.529412;PAIREDR=0.522472;PAO=0;PQA=0;PQR=0;PRO=0;QA=1330;QR=7176;RO=178;RPL=0;RPP=76.8404;RPPR=389.532;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=178;SRP=389.532;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:29,1:29:1167:1:41:0,-4.93633,-101.209 0/1:57:39,18:39:1576:18:736:-49.4036,0,-124.91 0/1:22:20,2:20:813:2:82:-1.15702,0,-66.8609 0/1:38:29,9:29:1159:9:340:-19.504,0,-93.1479 0/0:26:24,2:24:974:2:72:0,-0.990409,-81.1206 0/0:39:37,2:37:1487:2:59:0,-6.13931,-128.469 dDocent_Contig_6410 130 . G A 214.807 . AB=0.15534;ABP=109.286;AC=1;AF=0.0833333;AN=12;AO=27;CIGAR=1X;DP=783;DPB=783;DPRA=0.717105;EPP=61.6401;EPPR=1642.47;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=970;QR=26580;RO=755;RPL=0;RPP=61.6401;RPPR=1642.47;RPR=27;RUN=1;SAF=0;SAP=61.6401;SAR=27;SRF=0;SRP=1642.47;SRR=755;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:103:87,16:87:3089:16:593:-22.7026,0,-247.231 0/0:26:26,0:26:927:0:0:0,-7.82678,-83.746 0/0:104:96,8:96:3443:8:266:0,-7.04849,-285.816 0/0:120:117,3:117:4173:3:111:0,-25.7697,-365.393 0/0:155:154,0:154:5319:0:0:0,-46.3586,-478.774 0/0:275:275,0:275:9629:0:0:0,-82.7832,-866.601 dDocent_Contig_6412 23 . C A 66.1091 . AB=0.1;ABP=183.677;AC=1;AF=0.0833333;AN=12;AO=22;CIGAR=1X;DP=763;DPB=763;DPRA=0.89801;EPP=50.7827;EPPR=1612.07;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=852;QR=29503;RO=741;RPL=0;RPP=50.7827;RPPR=1612.07;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=741;SRP=1612.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:130:117,13:117:4657:13:518:-7.83276,0,-379.907 0/0:121:120,1:120:4825:1:41:0,-32.3301,-430.044 0/0:110:102,8:102:4066:8:293:0,-6.40827,-339.198 0/0:116:116,0:116:4630:0:0:0,-34.9195,-416.62 0/0:154:154,0:154:6064:0:0:0,-46.3586,-545.538 0/0:132:132,0:132:5261:0:0:0,-39.736,-473.333 dDocent_Contig_6413 138 . C T 722.967 . AB=0.172535;ABP=267.532;AC=5;AF=0.416667;AN=12;AO=50;CIGAR=1X;DP=332;DPB=332;DPRA=0;EPP=111.584;EPPR=613.194;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.92;PAIREDR=0.946619;PAO=0;PQA=0;PQR=0;PRO=0;QA=1870;QR=10521;RO=281;RPL=0;RPP=111.584;RPPR=613.194;RPR=50;RUN=1;SAF=0;SAP=111.584;SAR=50;SRF=0;SRP=613.194;SRR=281;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:21,7:21:803:7:263:-15.5977,0,-64.166 0/1:73:57,16:57:2128:16:581:-30.6395,0,-169.766 0/1:62:53,9:53:1985:9:339:-12.2011,0,-160.214 0/1:73:62,10:62:2307:10:378:-12.5917,0,-186.074 0/0:48:47,1:47:1775:1:36:0,-10.8512,-156.406 0/1:48:41,7:41:1523:7:273:-10.4886,0,-122.88 dDocent_Contig_6414 98 . N T 3466.93 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=117;CIGAR=2X;DP=117;DPB=125.5;DPRA=0;EPP=257.073;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=10;PQA=278;PQR=0;PRO=0;QA=3843;QR=0;RO=0;RPL=117;RPP=257.073;RPPR=0;RPR=0;RUN=1;SAF=117;SAP=257.073;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:25:0,25:0:0:25:809:-72.7996,-7.52575,0 1|1:28:0,28:0:0:28:933:-84.1979,-8.42884,0 1|1:39:0,39:0:0:39:1273:-114.607,-11.7402,0 1|1:25:0,25:0:0:25:828:-74.4862,-7.52575,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_6415 9 . T C 89.4885 . AB=0.12069;ABP=147.975;AC=2;AF=0.166667;AN=12;AO=28;CIGAR=1X;DP=385;DPB=385;DPRA=1.4383;EPP=3.32051;EPPR=760.951;GTI=0;LEN=1;MEANALT=1;MQM=47.6429;MQMR=59.9048;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0714286;PAIREDR=0.798319;PAO=0;PQA=0;PQR=0;PRO=0;QA=1101;QR=13707;RO=357;RPL=0;RPP=63.8115;RPPR=778.226;RPR=28;RUN=1;SAF=15;SAP=3.32051;SAR=13;SRF=355;SRP=760.951;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:70:64,6:64:2454:6:235:0,-0.00174293,-199.74 0/0:47:47,0:47:1811:0:0:0,-14.1484,-163.24 0/0:83:79,4:79:3024:4:151:0,-11.604,-258.943 0/0:69:65,4:65:2508:4:158:0,-6.4888,-211.636 0/1:47:41,6:41:1579:6:238:-6.58301,0,-128.23 0/1:69:61,8:61:2331:8:319:-5.58695,0,-189.231 dDocent_Contig_6416 42 . T A 397.626 . AB=0.171642;ABP=128.502;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1X;DP=397;DPB=397;DPRA=1.01901;EPP=52.9542;EPPR=815.141;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.935829;PAO=0;PQA=0;PQR=0;PRO=0;QA=918;QR=14628;RO=374;RPL=0;RPP=52.9542;RPPR=815.141;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=374;SRP=815.141;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:57:57,0:57:2204:0:0:0,-17.1587,-198.544 0/0:66:66,0:66:2538:0:0:0,-19.868,-228.573 0/0:54:54,0:54:2123:0:0:0,-16.2556,-191.26 0/0:86:86,0:86:3391:0:0:0,-25.8886,-305.258 0/1:64:53,11:53:2092:11:435:-20.2365,0,-169.209 0/1:70:58,12:58:2280:12:483:-22.7479,0,-184.302 dDocent_Contig_6417 28 . C T 13276.7 . AB=0.384244;ABP=147.794;AC=4;AF=0.333333;AN=12;AO=478;CIGAR=1X;DP=2289;DPB=2289;DPRA=0.595215;EPP=1040.97;EPPR=3931.2;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.987286;PAO=0;PQA=0;PQR=0;PRO=0;QA=18996;QR=72296;RO=1809;RPL=0;RPP=1040.97;RPPR=3931.2;RPR=478;RUN=1;SAF=478;SAP=1040.97;SAR=0;SRF=1809;SRP=3931.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:269:120,149:120:4789:149:5924:-451.951,0,-349.94 0/1:381:262,119:262:10516:119:4703:-308.505,0,-831.032 0/1:198:124,74:124:4950:74:2966:-207.417,0,-385.767 0/1:396:259,136:259:10352:136:5403:-367.02,0,-811.897 0/0:536:536,0:536:21302:0:0:0,-161.352,-1915.35 0/0:509:508,0:508:20387:0:0:0,-152.923,-1832.69 dDocent_Contig_6418 21 . C T 1152.67 . AB=0.170483;ABP=373.658;AC=3;AF=0.25;AN=12;AO=73;CIGAR=1X;DP=774;DPB=774;DPRA=0.912409;EPP=161.528;EPPR=1525.21;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.984308;PAO=0;PQA=0;PQR=0;PRO=0;QA=2889;QR=27445;RO=701;RPL=0;RPP=161.528;RPPR=1525.21;RPR=73;RUN=1;SAF=73;SAP=161.528;SAR=0;SRF=701;SRP=1525.21;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:107:101,6:101:3911:6:246:0,-9.69009,-329.505 0/1:170:138,32:138:5340:32:1242:-60.8732,0,-429.349 0/1:91:72,19:72:2861:19:762:-41.5075,0,-230.21 0/1:132:116,16:116:4568:16:639:-18.1077,0,-371.339 0/0:114:114,0:114:4458:0:0:0,-34.3174,-401.196 0/0:160:160,0:160:6307:0:0:0,-48.1648,-567.432 dDocent_Contig_6419 8 . A G 2746.06 . AB=0.248394;ABP=259.797;AC=6;AF=0.5;AN=12;AO=116;CIGAR=2X2M;DP=467;DPB=467;DPRA=0;EPP=254.901;EPPR=617.537;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.681034;PAIREDR=0.597173;PAO=0;PQA=0;PQR=0;PRO=0;QA=4425;QR=10969;RO=283;RPL=0;RPP=254.901;RPPR=617.537;RPR=116;RUN=1;SAF=116;SAP=254.901;SAR=0;SRF=283;SRP=617.537;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:54:40,4,10:40:1550:4,10:154,388:-19.841,-19.2393,-145.372,0,-114.696,-124.329 0|1:78:43,14,21:43:1666:14,21:548,808:-53.3913,-21.2724,-153.923,0,-91.7982,-130.538 0|1:52:34,1,17:34:1319:1,17:40,658:-43.8056,-50.7448,-158.815,0,-105.063,-103.241 0|1:96:72,13,11:72:2782:13,11:511,415:-20.3673,0,-224.583,-8.03749,-194.486,-233.209 0|1:104:58,21,25:58:2266:21,25:805,950:-60.4435,-11.835,-191.816,0,-120.235,-178.774 0|1:83:36,15,32:36:1386:15,32:587,1206:-87.9797,-50.5487,-159.833,0,-65.5259,-104.158 dDocent_Contig_6420 57 . A G 67.5333 . AB=0.0972973;ABP=263.599;AC=2;AF=0.166667;AN=12;AO=32;CIGAR=1X;DP=637;DPB=637;DPRA=1.25;EPP=72.4974;EPPR=1316.75;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.90625;PAIREDR=0.981818;PAO=0;PQA=0;PQR=0;PRO=0;QA=1248;QR=23791;RO=605;RPL=32;RPP=72.4974;RPPR=1316.75;RPR=0;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=605;SRP=1316.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:83:74,9:74:2941:9:360:-7.77779,0,-239.815 0/0:138:131,7:131:5134:7:277:0,-16.245,-436.669 0/1:102:93,9:93:3691:9:361:-2.14882,0,-301.513 0/0:132:125,7:125:4927:7:250:0,-16.9037,-420.522 0/0:59:59,0:59:2288:0:0:0,-17.7608,-206.102 0/0:123:123,0:123:4810:0:0:0,-37.0267,-432.839 dDocent_Contig_6421 8 . A T 1046.65 . AB=0.197952;ABP=235.195;AC=5;AF=0.416667;AN=12;AO=69;CIGAR=1X;DP=432;DPB=432;DPRA=0;EPP=152.842;EPPR=791.255;GTI=0;LEN=1;MEANALT=1;MQM=59.913;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.985507;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2649;QR=13768;RO=363;RPL=0;RPP=152.842;RPPR=791.255;RPR=69;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=363;SRP=791.255;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:59:49,10:49:1860:10:382:-16.9741,0,-149.886 0/1:74:64,10:64:2429:10:386:-12.8119,0,-196.542 0/0:139:128,11:128:4850:11:423:0,-3.42037,-398.121 0/1:55:43,12:43:1649:12:462:-25.3739,0,-132.117 0/1:53:36,17:36:1353:17:649:-42.791,0,-106.095 0/1:52:43,9:43:1627:9:347:-15.9357,0,-131.04 dDocent_Contig_6422 30 . C T 6351.85 . AB=0.167603;ABP=2052.9;AC=3;AF=0.25;AN=12;AO=468;CIGAR=1X;DP=5119;DPB=5119;DPRA=0;EPP=1019.26;EPPR=10098.2;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.99359;PAIREDR=0.992902;PAO=0;PQA=0;PQR=0;PRO=0;QA=18587;QR=184940;RO=4649;RPL=0;RPP=1019.26;RPPR=10098.2;RPR=468;RUN=1;SAF=468;SAP=1019.26;SAR=0;SRF=4649;SRP=10098.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:708:665,43:665:26490:43:1668:0,-62.7912,-2231.46 0/1:718:535,183:535:21217:183:7310:-441.408,0,-1691.62 0/1:567:517,50:517:20598:50:1992:-8.7888,0,-1681.37 0/1:851:726,125:726:28902:125:4961:-190.21,0,-2342.39 0/0:1175:1145,30:1145:45561:30:1158:0,-249.221,-3991.63 0/0:1100:1061,37:1061:42172:37:1498:0,-195.567,-3656.45 dDocent_Contig_6423 41 . T C 1457.66 . AB=0.331325;ABP=44.0328;AC=3;AF=0.25;AN=12;AO=58;CIGAR=1X;DP=259;DPB=259;DPRA=1.79231;EPP=128.956;EPPR=439.476;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.982759;PAIREDR=0.985075;PAO=0;PQA=0;PQR=0;PRO=0;QA=2343;QR=8029;RO=201;RPL=0;RPP=128.956;RPPR=439.476;RPR=58;RUN=1;SAF=58;SAP=128.956;SAR=0;SRF=201;SRP=439.476;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:51:49,2:49:1960:2:80:0,-7.76074,-169.004 0/0:26:26,0:26:1044:0:0:0,-7.82678,-94.252 0/0:16:15,1:15:582:1:41:0,-0.721913,-48.6157 0/1:28:25,3:25:990:3:122:-2.94365,0,-80.9646 0/1:59:33,26:33:1309:26:1051:-77.1175,0,-100.311 0/1:79:53,26:53:2144:26:1049:-70.9186,0,-169.349 dDocent_Contig_6424 11 . G C 9843.07 . AB=0.190146;ABP=2169.55;AC=6;AF=0.5;AN=12;AO=494;CIGAR=1X;DP=2598;DPB=2598;DPRA=0;EPP=1075.72;EPPR=4567.45;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.999524;PAO=0;PQA=0;PQR=0;PRO=0;QA=19749;QR=83506;RO=2102;RPL=0;RPP=1075.72;RPPR=4567.45;RPR=494;RUN=1;SAF=494;SAP=1075.72;SAR=0;SRF=2102;SRP=4567.45;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:264:202,61:202:8048:61:2437:-139.896,0,-644.325 0/1:408:343,65:343:13630:65:2594:-110.766,0,-1102.89 0/1:436:334,102:334:13373:102:4058:-233.95,0,-1071.32 0/1:353:290,63:290:11428:63:2525:-121.118,0,-921.518 0/1:591:495,96:495:19635:96:3849:-168.487,0,-1587.67 0/1:546:438,107:438:17392:107:4286:-221.313,0,-1399.54 dDocent_Contig_6425 28 . T A 237.922 . AB=0.144;ABP=140.612;AC=3;AF=0.25;AN=12;AO=21;CIGAR=1X;DP=361;DPB=361;DPRA=1.00417;EPP=48.6112;EPPR=739.139;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99705;PAO=0;PQA=0;PQR=0;PRO=0;QA=838;QR=13543;RO=339;RPL=0;RPP=48.6112;RPPR=739.139;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=339;SRP=739.139;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:44:35,9:35:1395:9:352:-18.789,0,-112.554 0/1:46:40,6:40:1618:6:241:-8.21892,0,-131.998 0/0:116:112,3:112:4470:3:122:0,-23.6472,-390.86 0/1:35:32,3:32:1266:3:123:-0.928738,0,-103.663 0/0:57:57,0:57:2303:0:0:0,-17.1587,-207.42 0/0:63:63,0:63:2491:0:0:0,-18.9649,-224.334 dDocent_Contig_6426 17 . A T 1658.21 . AB=0.16443;ABP=585.956;AC=4;AF=0.333333;AN=12;AO=116;CIGAR=1X;DP=1181;DPB=1181;DPRA=0;EPP=254.901;EPPR=2313.46;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4589;QR=41655;RO=1064;RPL=0;RPP=254.901;RPPR=2313.46;RPR=116;RUN=1;SAF=116;SAP=254.901;SAR=0;SRF=1064;SRP=2313.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:127:93,34:93:3619:34:1362:-84.6048,0,-287.531 0/1:119:107,12:107:4184:12:472:-7.00598,0,-340.722 0/1:93:77,16:77:3047:16:644:-30.2979,0,-246.334 0/1:257:221,36:221:8768:36:1425:-51.1344,0,-711.282 0/0:315:297,17:297:11550:17:648:0,-36.0024,-980.19 0/0:270:269,1:269:10487:1:38:0,-77.4808,-939.437 dDocent_Contig_6427 48 . C A 19028.3 . AB=0.240525;ABP=2008.87;AC=6;AF=0.5;AN=12;AO=825;CIGAR=1X;DP=3430;DPB=3430;DPRA=0;EPP=1794.48;EPPR=5640.17;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999616;PAO=0;PQA=0;PQR=0;PRO=0;QA=32751;QR=104252;RO=2604;RPL=0;RPP=1794.48;RPPR=5640.17;RPR=825;RUN=1;SAF=825;SAP=1794.48;SAR=0;SRF=2604;SRP=5657.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:565:426,139:426:17062:139:5471:-322.14,0,-1364.06 0/1:635:450,184:450:17969:184:7329:-468.058,0,-1424.52 0/1:456:335,121:335:13472:121:4822:-296.611,0,-1074.13 0/1:548:454,94:454:18232:94:3761:-173.531,0,-1474.35 0/1:526:395,131:395:15743:131:5160:-305.939,0,-1257.27 0/1:700:544,156:544:21774:156:6208:-347.768,0,-1747 dDocent_Contig_6428 68 . A G 818.513 . AB=0.20229;ABP=204.709;AC=3;AF=0.25;AN=12;AO=63;CIGAR=1X;DP=547;DPB=547;DPRA=1.38551;EPP=139.813;EPPR=1054;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.952381;PAIREDR=0.977273;PAO=0;PQA=0;PQR=0;PRO=0;QA=2156;QR=16788;RO=484;RPL=63;RPP=139.813;RPPR=1054;RPR=0;RUN=1;SAF=63;SAP=139.813;SAR=0;SRF=484;SRP=1054;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:67:54,13:54:1850:13:446:-20.299,0,-146.612 0/1:88:64,24:64:2182:24:830:-48.5274,0,-170.16 0/0:117:111,6:111:3939:6:181:0,-18.6347,-338.104 0/1:107:91,16:91:3163:16:557:-18.2467,0,-252.688 0/0:69:69,0:69:2338:0:0:0,-20.7711,-210.68 0/0:99:95,4:95:3316:4:142:0,-16.6728,-285.53 dDocent_Contig_6429 26 . T C 135763 . AB=0.0357955;ABP=3297.18;AC=0;AF=0;AN=12;AO=63;CIGAR=2X;DP=4896;DPB=4896;DPRA=0.473309;EPP=139.813;EPPR=1470.93;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.957101;PAO=0;PQA=0;PQR=0;PRO=0;QA=2510;QR=26871;RO=676;RPL=0;RPP=139.813;RPPR=1470.93;RPR=63;RUN=1;SAF=63;SAP=139.813;SAR=0;SRF=676;SRP=1470.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:714:197,14,503:197:7854:14,503:558,20040:-1590.77,-1604.12,-2246.67,0,-600.812,-495.345 0|0:629:116,20,493:116:4567:20,493:800,19732:-1590.48,-1559.5,-1929.15,0,-309.766,-227.255 0|0:417:76,29,311:76:3011:29,311:1152,12432:-1001.08,-929.119,-1168.2,0,-152.979,-154.195 0|0:657:116,0,540:116:4646:0,540:0,21562:-1741.14,-1776.06,-2158.8,0,-383.035,-220.478 0|0:1155:61,0,1093:61:2401:0,1093:0,43648:-3707.88,-3726.25,-3923.75,-131.239,-329.026,0 0|0:1324:110,0,1214:110:4392:0,1214:0,48356:-3952.2,-3985.31,-4347.02,-3.34353,-365.45,0 dDocent_Contig_6430 66 . G C 30732.2 . AB=0.589504;ABP=122.345;AC=6;AF=0.5;AN=12;AO=1011;CIGAR=2X;DP=1715;DPB=1715;DPRA=0;EPP=2198.37;EPPR=1505.67;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998022;PAIREDR=0.998555;PAO=0;PQA=0;PQR=0;PRO=0;QA=39995;QR=26212;RO=692;RPL=1011;RPP=2198.37;RPPR=1505.67;RPR=0;RUN=1;SAF=1011;SAP=2198.37;SAR=0;SRF=692;SRP=1505.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:300:149,150:149:5645:150:5945:-444.464,0,-417.594 0|1:202:44,157:44:1679:157:6200:-497.191,0,-90.7737 0|1:332:68,264:68:2607:264:10420:-837.226,0,-134.872 0|1:365:125,230:125:4732:230:9141:-714.91,0,-318.646 0|1:339:239,100:239:9020:100:3970:-255.249,0,-709.461 0|1:177:67,110:67:2529:110:4319:-335.4,0,-174.524 dDocent_Contig_6431 110 . C A 296.489 . AB=0.225806;ABP=43.4978;AC=1;AF=0.0833333;AN=12;AO=23;CIGAR=1X;DP=547;DPB=547;DPRA=0.452962;EPP=52.9542;EPPR=1140.86;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.0434783;PAIREDR=0.00954198;PAO=0;PQA=0;PQR=0;PRO=0;QA=907;QR=20941;RO=524;RPL=23;RPP=52.9542;RPPR=1140.86;RPR=0;RUN=1;SAF=0;SAP=52.9542;SAR=23;SRF=0;SRP=1140.86;SRR=524;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:49:47,2:47:1882:2:82:0,-6.97079,-161.803 0/0:95:90,5:90:3592:5:198:0,-10.4021,-305.113 0/1:62:48,14:48:1933:14:550:-31.1718,0,-155.502 0/0:54:52,2:52:2076:2:77:0,-8.94742,-179.717 0/0:128:128,0:128:5131:0:0:0,-38.5318,-461.65 0/0:159:159,0:159:6327:0:0:0,-47.8638,-569.164 dDocent_Contig_6432 47 . T A 1024.43 . AB=0.172205;ABP=311.93;AC=2;AF=0.166667;AN=12;AO=75;CIGAR=1X;DP=1003;DPB=1003;DPRA=0;EPP=165.871;EPPR=2018.14;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3002;QR=37049;RO=928;RPL=0;RPP=165.871;RPPR=2018.14;RPR=75;RUN=1;SAF=75;SAP=165.871;SAR=0;SRF=928;SRP=2018.14;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:134:128,6:128:5098:6:243:0,-18.0898,-436.442 0/0:231:227,4:227:9080:4:160:0,-54.7545,-801.857 0/1:225:196,29:196:7838:29:1168:-37.6651,0,-637.265 0/0:147:140,7:140:5534:7:283:0,-18.4084,-472.048 0/0:160:159,1:159:6373:1:41:0,-44.0702,-569.206 0/1:106:78,28:78:3126:28:1107:-67.9994,0,-249.508 dDocent_Contig_6433 48 . G A 83.3006 . AB=0.121622;ABP=95.0338;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=303;DPB=303;DPRA=1.2234;EPP=26.8965;EPPR=637.08;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.545455;PAIREDR=0.582192;PAO=0;PQA=0;PQR=0;PRO=0;QA=428;QR=11534;RO=292;RPL=0;RPP=26.8965;RPPR=637.08;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=292;SRP=637.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:45:45,0:45:1756:0:0:0,-13.5463,-158.264 0/1:74:65,9:65:2563:9:353:-9.85294,0,-208.526 0/0:41:39,2:39:1565:2:75:0,-5.22213,-133.967 0/0:43:43,0:43:1695:0:0:0,-12.9443,-152.772 0/0:46:46,0:46:1821:0:0:0,-13.8474,-164.102 0/0:54:54,0:54:2134:0:0:0,-16.2556,-192.238 dDocent_Contig_6434 10 . A G 84.026 . AB=0.107143;ABP=153.152;AC=1;AF=0.0833333;AN=12;AO=26;CIGAR=1X;DP=633;DPB=633;DPRA=1.08224;EPP=59.4686;EPPR=1321.09;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.971993;PAO=0;PQA=0;PQR=0;PRO=0;QA=1042;QR=24171;RO=607;RPL=0;RPP=59.4686;RPPR=1321.09;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=607;SRP=1321.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:97:97,0:97:3872:0:0:0,-29.1999,-348.48 0/0:122:115,7:115:4603:7:283:0,-10.8823,-388.343 0/0:95:88,7:88:3490:7:278:0,-3.20892,-288.751 0/1:112:100,12:100:3954:12:481:-9.92548,0,-322.146 0/0:86:86,0:86:3418:0:0:0,-25.8886,-307.668 0/0:121:121,0:121:4834:0:0:0,-36.4246,-434.951 dDocent_Contig_6435 8 . A C 51.7484 . AB=0.0547264;ABP=349.16;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=2X;DP=601;DPB=601;DPRA=1.35686;EPP=57.2971;EPPR=1160.41;GTI=0;LEN=1;MEANALT=1.66667;MQM=41.36;MQMR=59.8499;NS=6;NUMALT=2;ODDS=0;PAIRED=0.84;PAIREDR=0.994371;PAO=0;PQA=0;PQR=0;PRO=0;QA=949;QR=20412;RO=533;RPL=0;RPP=57.2971;RPPR=1160.41;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=533;SRP=1160.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:88:87,0,1:87:3344:0,1:0,39:0,-26.1896,-300.933,-25.092,-299.978,-299.677 0|0:117:105,0,12:105:4038:0,12:0,456:0,-31.6081,-363.22,-8.7697,-340.639,-337.027 0|0:50:45,0,5:45:1734:0,5:0,195:0,-13.5463,-156.154,-8.61756,-151.389,-149.884 0|0:120:94,2,24:94:3599:2,24:70,915:-1.48078,-28.948,-322.326,0,-293.277,-286.883 0|0:145:131,14,0:131:4992:14,0:536,0:0,-0.583949,-406.249,-39.4349,-410.463,-448.971 0|1:81:71,9,0:71:2705:9,0:343,0:-6.67618,0,-219.454,-28.0493,-222.163,-249.964 dDocent_Contig_6436 34 . T G 1151.44 . AB=0.0833333;ABP=600.165;AC=3;AF=0.25;AN=12;AO=33;CIGAR=6M12I19M1X5M;DP=1505;DPB=1511.16;DPRA=0.704626;EPP=74.6689;EPPR=1431.84;GTI=0;LEN=1;MEANALT=12;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.99848;PAO=0;PQA=0;PQR=0;PRO=0;QA=1188;QR=25674;RO=658;RPL=0;RPP=74.6689;RPPR=1431.84;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=658;SRP=1431.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:193:45,0,0:45:1776:0,0:0,0:0,-13.5463,-159.687,-13.5463,-159.687,-159.687 0|1:268:36,14,23:36:1382:14,23:535,853:-58.9519,-25.8963,-135.117,0,-69.5428,-106.512 0|1:128:26,0,10:26:1010:0,10:0,335:-19.2916,-27.1183,-110.112,0,-82.9929,-79.9826 0|1:266:65,20,0:65:2553:20,0:753,0:-42.1228,0,-203.965,-61.6898,-209.985,-271.674 0|0:286:188,0,0:188:7343:0,0:0,0:0,-56.5936,-660.251,-56.5936,-660.251,-660.251 0|0:364:298,6,0:298:11610:6,0:201,0:0,-73.4384,-1025.85,-89.7069,-1027.66,-1043.93 dDocent_Contig_6437 38 . C A 78.7733 . AB=0.105691;ABP=169.119;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=1911;DPB=1911;DPRA=0.744141;EPP=46.4397;EPPR=4104.92;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.989942;PAO=0;PQA=0;PQR=0;PRO=0;QA=763;QR=75190;RO=1889;RPL=0;RPP=46.4397;RPPR=4104.92;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=1889;SRP=4104.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:297:294,3:294:11668:3:91:0,-80.9227,-1040.83 0/0:345:345,0:345:13801:0:0:0,-103.855,-1241.07 0/1:123:109,13:109:4333:13:513:-9.40021,0,-352.808 0/0:298:296,2:296:11774:2:81:0,-82.0212,-1051.18 0/0:423:422,0:422:16775:0:0:0,-127.035,-1508.02 0/0:425:423,2:423:16839:2:78:0,-120.534,-1506.79 dDocent_Contig_6438 8 . A T 783.283 . AB=0.176245;ABP=240.633;AC=2;AF=0.166667;AN=12;AO=46;CIGAR=1X;DP=888;DPB=888;DPRA=0.832536;EPP=102.898;EPPR=1831.39;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.608696;PAIREDR=0.605701;PAO=0;PQA=0;PQR=0;PRO=0;QA=1772;QR=32040;RO=842;RPL=0;RPP=102.898;RPPR=1831.39;RPR=46;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=842;SRP=1831.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:168:168,0:168:6401:0:0:0,-50.573,-576.02 0/0:190:190,0:190:7210:0:0:0,-57.1957,-648.76 0/0:110:110,0:110:4222:0:0:0,-33.1133,-380.056 0/0:159:159,0:159:6044:0:0:0,-47.8638,-543.911 0/1:123:96,27:96:3648:27:1037:-56.611,0,-291.416 0/1:138:119,19:119:4515:19:735:-24.9392,0,-364.865 dDocent_Contig_6439 98 . N A 1575.54 . AB=0;ABP=0;AC=8;AF=0.8;AN=10;AO=49;CIGAR=1X;DP=50;DPB=50;DPRA=12.25;EPP=109.412;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0.979592;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1727;QR=0;RO=0;RPL=49;RPP=109.412;RPPR=0;RPR=0;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:17:0,17:0:0:17:602:-54.5105,-5.11751,0 1/1:14:0,14:0:0:14:490:-44.4314,-4.21442,0 1/1:5:0,5:0:0:5:178:-16.3686,-1.50515,0 1/1:13:0,13:0:0:13:457:-41.4644,-3.91339,0 ./.:.:.:.:.:.:.:. 0/0:1:0,0:0:0:0:0:0,0,0 dDocent_Contig_6440 12 . A T 105.513 . AB=0.115646;ABP=380.256;AC=3;AF=0.25;AN=12;AO=61;CIGAR=3M1X;DP=635;DPB=621;DPRA=0;EPP=135.47;EPPR=1186.46;GTI=0;LEN=1;MEANALT=2.5;MQM=34.2459;MQMR=59.855;NS=6;NUMALT=2;ODDS=0;PAIRED=0.0983607;PAIREDR=0.788991;PAO=0;PQA=0;PQR=0;PRO=0;QA=2391;QR=21130;RO=545;RPL=0;RPP=135.47;RPPR=1186.46;RPR=61;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=545;SRP=1186.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:135:113,7,14:113:4350:7,14:258,540:0,-14.2001,-369.341,-11.9278,-349.309,-364.863 0|1:136:115,3,17:115:4498:3,17:115,665:-10.8857,-38.2291,-407.138,0,-362.55,-364.709 0|1:69:57,5,7:57:2196:5,7:191,277:-2.87409,-5.33346,-184.161,0,-165.632,-178.218 0|1:89:72,7,10:72:2793:7,10:255,403:-0.724218,-2.66476,-230.113,0,-209.798,-226.491 0|0:78:71,1,6:71:2743:1,6:38,222:0,-18.4694,-243.555,-9.12836,-231.542,-232.626 0|0:128:117,1,7:117:4550:1,7:39,284:0,-33.1989,-406.928,-18.2689,-390.386,-390.298 dDocent_Contig_6441 28 . T C 49.5785 . AB=0.0913242;ABP=320.71;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=2110;DPB=2110;DPRA=0.579059;EPP=46.4397;EPPR=4541.39;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998086;PAO=0;PQA=0;PQR=0;PRO=0;QA=801;QR=83277;RO=2090;RPL=0;RPP=46.4397;RPPR=4541.39;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=2090;SRP=4541.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:391:391,0:391:15533:0:0:0,-117.703,-1396.73 0/0:321:321,0:321:12788:0:0:0,-96.6306,-1150 0/0:205:205,0:205:8194:0:0:0,-61.7111,-736.987 0/1:219:199,20:199:7878:20:801:-6.48072,0,-642.679 0/0:468:468,0:468:18613:0:0:0,-140.882,-1673.62 0/0:506:506,0:506:20271:0:0:0,-152.321,-1822.65 dDocent_Contig_6442 8 . A G 4040.83 . AB=0.251029;ABP=395.511;AC=4;AF=0.333333;AN=12;AO=183;CIGAR=1X;DP=995;DPB=995;DPRA=1.3703;EPP=400.39;EPPR=1766.25;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.969212;PAO=0;PQA=0;PQR=0;PRO=0;QA=6997;QR=28598;RO=812;RPL=0;RPP=400.39;RPPR=1766.25;RPR=183;RUN=1;SAF=183;SAP=400.39;SAR=0;SRF=812;SRP=1766.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:181:126,55:126:4518:55:2101:-134.833,0,-352.238 0/1:173:138,35:138:4900:35:1350:-69.7069,0,-389.01 0/1:120:87,33:87:3076:33:1270:-78.4675,0,-240.898 0/1:255:195,60:195:6946:60:2276:-128.297,0,-548.354 0/0:151:151,0:151:5071:0:0:0,-45.4555,-456.539 0/0:115:115,0:115:4087:0:0:0,-34.6184,-367.965 dDocent_Contig_6443 1 . N A 633.803 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=18;CIGAR=1X1M7I2M;DP=18;DPB=49.5;DPRA=0;EPP=42.0968;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0.388889;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=676;QR=0;RO=0;RPL=0;RPP=42.0968;RPPR=0;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:2:0,2:0:0:2:75:-7.12034,-0.60206,0 1|1:1:0,1:0:0:1:38:-3.79727,-0.30103,0 1|1:4:0,4:0:0:4:151:-13.9579,-1.20412,0 1|1:9:0,9:0:0:9:337:-30.6845,-2.70927,0 .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:75:-7.12034,-0.60206,0 dDocent_Contig_6444 50 . A T 2261.59 . AB=0.0948276;ABP=168.417;AC=0;AF=0;AN=12;AO=18;CIGAR=1M1X1M;DP=222;DPB=194.667;DPRA=0;EPP=42.0968;EPPR=263.587;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=721;QR=4719;RO=120;RPL=18;RPP=42.0968;RPPR=263.587;RPR=0;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=120;SRP=263.587;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:15:10,4,1:10:390:4,1:142,38:-8.53412,0,-30.8605,-8.42289,-28.949,-40.2025 0|0:27:22,2,2:22:840:2,2:75,79:0,-0.488456,-68.7787,-0.11743,-62.8791,-68.4193 0|0:64:55,4,4:55:2175:4,4:154,161:0,-3.9025,-181.712,-3.26287,-169.646,-181.085 0|0:15:14,0,1:14:551:0,1:0,41:0,-4.21442,-49.5261,-0.420883,-46.141,-45.8399 0|0:54:9,36,9:9:362:36,9:1393,361:-111.684,0,-18.9961,-84.6484,-0.0913955,-111.775 0|0:47:10,36,1:10:401:36,1:1390,41:-111.106,0,-22.1939,-110.732,-29.646,-143.473 dDocent_Contig_6445 14 . G A 2880.81 . AB=0.0756303;ABP=189.155;AC=0;AF=0;AN=12;AO=9;CIGAR=1X2M1X;DP=381;DPB=381;DPRA=0;EPP=22.5536;EPPR=393.517;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=59.7385;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.949541;PAO=0;PQA=0;PQR=0;PRO=0;QA=355;QR=8586;RO=218;RPL=0;RPP=22.5536;RPPR=476.391;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=208;SRP=393.517;SRR=10;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:77:43,0,4,0,30:43:1691:0,4,0,30:0,163,0,1211:-86.8826,-99.8269,-238.913,-86.3791,-225.465,-224.261,-99.8269,-238.913,-225.465,-238.913,0,-139.079,-125.63,-139.079,-130.048 0|0:76:51,0,9,5,10:51:2013:0,9,5,10:0,360,201,399:-17.5049,-32.8575,-198.486,-3.20293,-168.831,-166.121,-16.2931,-181.921,-152.266,-180.416,0,-165.627,-135.972,-149.063,-162.617 0|0:54:23,0,7,0,24:23:917:0,7,0,24:0,284,0,967:-72.7769,-79.7006,-155.215,-56.2786,-131.793,-129.686,-79.7006,-155.215,-131.793,-155.215,0,-75.5116,-52.0886,-75.5116,-68.2869 0|0:55:35,0,0,1,19:35:1379:0,0,1,19:0,0,41,765:-52.5078,-63.0438,-176.143,-63.0438,-176.143,-176.143,-59.6594,-172.759,-172.759,-172.458,0,-113.089,-113.089,-109.704,-107.369 0|0:71:42,8,5,0,16:42:1633:8,5,0,16:314,200,0,638:-39.8966,-26.7181,-158.491,-36.0643,-144.424,-168.742,-52.5398,-160.899,-170.247,-186.723,0,-108.359,-117.707,-134.183,-129.366 0|0:48:24,1,2,10,11:24:953:1,2,10,11:41,80,407,448:-29.7337,-33.5742,-111.566,-30.369,-105.277,-108.06,-3.38435,-78.2921,-75.0864,-78.6661,0,-74.9077,-71.7021,-44.7156,-74.9807 dDocent_Contig_6446 11 . A C 335.767 . AB=0.119122;ABP=404.964;AC=3;AF=0.25;AN=12;AO=45;CIGAR=1X;DP=980;DPB=980;DPRA=0.455166;EPP=100.727;EPPR=2031.17;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.956103;PAO=0;PQA=0;PQR=0;PRO=0;QA=1756;QR=37339;RO=934;RPL=0;RPP=100.727;RPPR=2031.17;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=934;SRP=2031.17;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:112:96,16:96:3863:16:642:-24.3991,0,-313.946 0/0:148:140,7:140:5602:7:276:0,-19.4522,-478.786 0/1:113:99,14:99:3957:14:512:-12.3811,0,-322.094 0/1:94:86,8:86:3436:8:326:-1.41305,0,-280.977 0/0:308:308,0:308:12287:0:0:0,-92.7172,-1104.96 0/0:205:205,0:205:8194:0:0:0,-61.7111,-737.004 dDocent_Contig_6447 98 . N C 1904.5 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=66;CIGAR=1X;DP=67;DPB=67;DPRA=0;EPP=146.327;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.697;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.439394;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2091;QR=0;RO=0;RPL=66;RPP=146.327;RPPR=0;RPR=0;RUN=1;SAF=66;SAP=146.327;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:14:0,14:0:0:14:449:-40.7181,-4.21442,0 1/1:3:0,2:0:0:2:42:-3.87205,-0.60206,0 1/1:10:0,10:0:0:10:335:-30.3678,-3.0103,0 1/1:5:0,5:0:0:5:118:-10.8535,-1.50515,0 1/1:9:0,9:0:0:9:304:-27.6886,-2.70927,0 1/1:26:0,26:0:0:26:843:-76.1713,-7.82678,0 dDocent_Contig_6448 10 . A G 877.936 . AB=0.142534;ABP=493.586;AC=4;AF=0.333333;AN=12;AO=77;CIGAR=1X2M1X;DP=878;DPB=878;DPRA=0;EPP=170.214;EPPR=1724.99;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3056;QR=31219;RO=793;RPL=0;RPP=170.214;RPPR=1724.99;RPR=77;RUN=1;SAF=77;SAP=170.214;SAR=0;SRF=793;SRP=1724.99;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:127:114,13:114:4508:13:516:-8.55602,0,-367.466 0|1:135:102,28:102:4002:28:1119:-61.4598,0,-320.671 0|1:115:100,15:100:3941:15:599:-19.631,0,-320.095 0|1:65:58,7:58:2282:7:273:-5.36858,0,-185.995 0|0:157:154,2:154:6033:2:81:0,-39.6297,-535.148 0|0:279:265,12:265:10453:12:468:0,-41.1937,-897.74 dDocent_Contig_6449 21 . C T 1861.59 . AB=0.0423326;ABP=4214.79;AC=1;AF=0.0833333;AN=12;AO=99;CIGAR=9M1X1M;DP=4248;DPB=4280.18;DPRA=1.56214;EPP=217.986;EPPR=8189.46;GTI=0;LEN=1;MEANALT=6.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.22045e-16;PAIRED=1;PAIREDR=0.999469;PAO=0;PQA=0;PQR=0;PRO=0;QA=3943;QR=148897;RO=3770;RPL=0;RPP=217.986;RPPR=8189.46;RPR=99;RUN=1;SAF=99;SAP=217.986;SAR=0;SRF=3770;SRP=8189.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:620:572,44,0:572:22528:44,0:1698,0:0,-32.7214,-1872.79,-172.189,-1886.03,-2025.46 0|0:761:642,115,2:642:25403:115,2:4423,78:-169.82,0,-2056.03,-356.67,-2084.23,-2446.71 0|0:410:381,28,0:381:15037:28,0:1072,0:0,-26.4715,-1255.58,-114.692,-1264,-1351.96 0|0:903:830,63,1:830:32823:63,1:2441,10:0,-49.2923,-2731.56,-249.26,-2749.93,-2950.13 0|1:647:563,28,53:563:22204:28,53:1083,2145:-7.39683,-87.9399,-1906.32,0,-1737.89,-1810.88 0|0:907:782,78,43:782:30902:78,43:3037,1710:-14.1644,0,-2519.41,-108.794,-2402.12,-2638.75 dDocent_Contig_6450 30 . T G 53282 . AB=0.619649;ABP=357.398;AC=6;AF=0.5;AN=12;AO=1766;CIGAR=1X;DP=2850;DPB=2850;DPRA=0;EPP=3837.83;EPPR=2350.37;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998867;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=68900;QR=42867;RO=1081;RPL=0;RPP=3837.83;RPPR=2350.37;RPR=1766;RUN=1;SAF=1766;SAP=3837.83;SAR=0;SRF=1081;SRP=2350.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:426:212,214:212:8385:214:8319:-620.133,0,-625.963 0/1:443:207,234:207:8203:234:9142:-689.231,0,-604.73 0/1:441:163,278:163:6534:278:10887:-846.481,0,-455.027 0/1:461:254,207:254:10022:207:8038:-584.339,0,-762.618 0/1:629:160,468:160:6326:468:18245:-1451.38,0,-379.676 0/1:450:85,365:85:3397:365:14269:-1147.85,0,-170.322 dDocent_Contig_6451 26 . G A 3481.01 . AB=0.621622;ABP=26.7791;AC=6;AF=0.5;AN=12;AO=115;CIGAR=1X2M;DP=207;DPB=207;DPRA=0;EPP=252.73;EPPR=191.928;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.765217;PAIREDR=0.977011;PAO=0;PQA=0;PQR=0;PRO=0;QA=4542;QR=3303;RO=87;RPL=0;RPP=252.73;RPPR=191.928;RPR=115;RUN=1;SAF=115;SAP=252.73;SAR=0;SRF=87;SRP=191.928;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:25:17,1,7:17:628:1,7:41,279:-17.8473,-19.5793,-70.616,0,-47.9339,-49.213 0|1:22:19,3,0:19:720:3,0:121,0:-4.65733,0,-58.5013,-10.3769,-59.4044,-69.3817 0|1:18:16,0,2:16:601:0,2:0,82:-2.36114,-7.17762,-56.3762,0,-49.6043,-49.0022 0|1:17:10,0,7:10:391:0,7:0,285:-20.9069,-23.9172,-56.0549,0,-32.5378,-30.4306 0|1:66:13,0,52:13:502:0,52:0,2008:-161.159,-165.073,-206.3,0,-41.4181,-25.7645 0|1:59:12,0,47:12:461:0,47:0,1888:-152.36,-155.972,-193.811,0,-38.2264,-24.078 dDocent_Contig_6453 1 . N G 170.532 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=30.5714;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=212;QR=0;RO=0;RPL=0;RPP=18.2106;RPPR=0;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:66:-5.39592,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:146:-11.3556,-1.50515,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6454 98 . N G 131.653 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=130;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 1/1:2:0,2:0:0:2:62:-5.88849,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_6455 13 . C A 463.329 . AB=0.123209;ABP=433.379;AC=2;AF=0.166667;AN=12;AO=75;CIGAR=1X;DP=904;DPB=904;DPRA=2.76393;EPP=165.871;EPPR=1803.16;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2946;QR=32374;RO=829;RPL=0;RPP=165.871;RPPR=1803.16;RPR=75;RUN=1;SAF=75;SAP=165.871;SAR=0;SRF=829;SRP=1803.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:160:149,11:149:5760:11:437:0,-8.48357,-478.607 0/1:210:182,28:182:7127:28:1118:-37.6886,0,-577.935 0/1:139:124,15:124:4873:15:593:-11.8661,0,-396.654 0/0:217:201,16:201:7853:16:609:0,-10.1934,-651.316 0/0:61:61,0:61:2404:0:0:0,-18.3628,-216.528 0/0:117:112,5:112:4357:5:189:0,-17.8489,-374.751 dDocent_Contig_6456 98 . N A 125.527 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=122;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:54:-5.12892,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 1/1:1:0,1:0:0:1:26:-2.59983,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_6457 107 . N A 532.482 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=17;CIGAR=1X;DP=17;DPB=17;DPRA=0;EPP=39.9253;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=581;QR=0;RO=0;RPL=0;RPP=39.9253;RPPR=0;RPR=17;RUN=1;SAF=0;SAP=39.9253;SAR=17;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:132:-12.2064,-1.20412,0 1/1:13:0,13:0:0:13:449:-40.7406,-3.91339,0 dDocent_Contig_6458 168 . A T 1804.53 . AB=0.214815;ABP=289.114;AC=5;AF=0.416667;AN=12;AO=89;CIGAR=1X;DP=482;DPB=482;DPRA=0;EPP=196.271;EPPR=856.399;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3525;QR=15360;RO=393;RPL=89;RPP=196.271;RPPR=856.399;RPR=0;RUN=1;SAF=0;SAP=196.271;SAR=89;SRF=0;SRP=856.399;SRR=393;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:47:22,25:22:810:25:975:-73.9015,0,-59.0388 0/1:87:72,15:72:2748:15:594:-27.608,0,-221.247 0/1:129:115,14:115:4509:14:557:-11.6352,0,-366.927 0/1:91:68,23:68:2726:23:924:-56.071,0,-218.06 0/1:51:41,10:41:1595:10:394:-20.4588,0,-128.422 0/0:77:75,2:75:2972:2:81:0,-15.4936,-259.884 dDocent_Contig_6459 25 . T C 964.164 . AB=0.0873016;ABP=189.412;AC=0;AF=0;AN=12;AO=11;CIGAR=1M1X16M;DP=249;DPB=251.944;DPRA=0;EPP=26.8965;EPPR=369.989;GTI=0;LEN=1;MEANALT=4.33333;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=2.77556e-17;PAIRED=0.636364;PAIREDR=0.573964;PAO=0;PQA=0;PQR=0;PRO=0;QA=436;QR=6597;RO=169;RPL=0;RPP=26.8965;RPPR=369.989;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=169;SRP=369.989;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:37:22,1,8,3,2:22:865:1,8,3,2:33,299,120,81:-17.8611,-21.8183,-92.6832,0,-68.51,-68.768,-14.5908,-83.0978,-61.2896,-84.8613,-17.7989,-86.3038,-64.4957,-79.0838,-88.3685 0|0:39:33,0,5,0,0:33:1289:0,5,0,0:0,194,0,0:-6.26048,-16.1945,-122.205,0,-106.267,-104.761,-16.1945,-122.205,-106.267,-122.205,-16.1945,-122.205,-106.267,-122.205,-122.205 0|0:32:23,2,4,3,0:23:901:2,4,3,0:49,160,118,0:-6.28531,-9.4353,-82.9167,0,-70.338,-72.9308,-3.48785,-73.8126,-64.4273,-76.7067,-13.209,-83.5188,-74.1349,-77.6098,-87.317 0|0:57:27,1,21,5,2:27:1042:1,21,5,2:41,781,198,82:-55.7828,-60.5252,-145.799,0,-82.1965,-79.2597,-47.6088,-129.801,-69.2823,-131.681,-57.1396,-139.33,-78.8115,-126.416,-142.113 0|0:45:32,0,9,0,0:32:1254:0,9,0,0:0,352,0,0:-19.4015,-29.0345,-132.182,0,-103.239,-100.529,-29.0345,-132.182,-103.239,-132.182,-29.0345,-132.182,-103.239,-132.182,-132.182 0|0:39:32,1,4,0,0:32:1246:1,4,0,0:41,141,0,0:-1.83544,-8.07603,-110.205,0,-99.0316,-101.212,-11.4684,-110.506,-102.416,-113.891,-11.4684,-110.506,-102.416,-113.891,-113.891 dDocent_Contig_6460 105 . N T 204.122 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=6;CIGAR=3X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=205;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 1|1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1|1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 1|1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_6461 16 . G A 220.299 . AB=0.162791;ABP=87.9502;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1X;DP=254;DPB=254;DPRA=1.17297;EPP=52.9542;EPPR=504.62;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.608696;PAIREDR=0.532468;PAO=0;PQA=0;PQR=0;PRO=0;QA=920;QR=9219;RO=231;RPL=0;RPP=52.9542;RPPR=504.62;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=231;SRP=504.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:35,2:35:1393:2:81:0,-3.45238,-117.933 0/0:51:47,4:47:1894:4:159:0,-0.660198,-155.965 0/0:37:37,0:37:1478:0:0:0,-11.1381,-133.269 0/1:35:28,7:28:1130:7:278:-14.8515,0,-91.4436 0/1:51:44,7:44:1729:7:282:-10.4001,0,-140.47 0/0:43:40,3:40:1595:3:120:0,-1.7566,-132.599 dDocent_Contig_6462 14 . T C 925.309 . AB=0.128906;ABP=309.222;AC=2;AF=0.166667;AN=12;AO=39;CIGAR=1M2D1X;DP=412;DPB=374;DPRA=1.02985;EPP=87.6977;EPPR=728.282;GTI=0;LEN=1;MEANALT=2.2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.487179;PAIREDR=0.479042;PAO=0;PQA=0;PQR=0;PRO=0;QA=1539;QR=12843;RO=334;RPL=0;RPP=87.6977;RPPR=728.282;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=334;SRP=728.282;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:56:39,1,14:39:1471:1,14:41,520:-30.7906,-39.1446,-159.387,0,-117.139,-116.309 0|1:77:50,19,8:50:1934:19,8:762,299:-47.7485,0,-153.149,-38.3257,-134.388,-194.765 0|0:72:53,8,11:53:2046:8,11:312,416:-18.1351,-8.44039,-174.058,0,-142.371,-164.704 0|0:89:82,6,1:82:3163:6,1:226,40:0,-6.19174,-264.105,-21.386,-262.616,-280.827 0|1:51:44,5,2:44:1719:5,2:198,73:-3.07245,0,-139.842,-10.3633,-135.385,-151.079 0|0:67:66,0,1:66:2510:0,1:0,38:0,-19.868,-225.71,-16.3717,-222.594,-222.293 dDocent_Contig_6463 98 . N G 97.967 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=105;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:105:-9.79616,-0.90309,0 dDocent_Contig_6464 9 . G A 28277 . AB=0.707646;ABP=502.605;AC=6;AF=0.5;AN=12;AO=944;CIGAR=2X2M2X2M1X;DP=1334;DPB=1334;DPRA=0;EPP=2052.88;EPPR=776.054;GTI=0;LEN=1;MEANALT=3.33333;MQM=53.6833;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.957627;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=36906;QR=13788;RO=356;RPL=0;RPP=2052.88;RPPR=776.054;RPR=944;RUN=1;SAF=944;SAP=2052.88;SAR=0;SRF=356;SRP=776.054;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:144:51,0,92:51:1976:0,92:0,3601:-266.313,-281.666,-443.999,0,-162.365,-134.67 0|1:286:90,1,191:90:3481:1,191:38,7430:-573.701,-597.677,-883.3,0,-282.8,-228.42 0|1:183:30,1,151:30:1161:1,151:39,5905:-449.749,-455.574,-550.639,0,-92.1592,-49.9097 0|1:256:55,0,198:55:2133:0,198:0,7741:-584.935,-601.491,-776.734,0,-175.222,-115.618 0|1:238:28,8,202:28:1091:8,202:301,7926:-642.368,-626.136,-713.4,0,-65.0247,-28.8747 0|1:227:102,13,110:102:3946:13,110:501,4303:-321.856,-311.421,-631.626,0,-282.983,-291.009 dDocent_Contig_6465 23 . G T 33.1946 . AB=0.130435;ABP=30.2953;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=150;DPB=150;DPRA=0.905512;EPP=9.52472;EPPR=322.217;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.884354;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=5870;RO=147;RPL=0;RPP=9.52472;RPPR=322.217;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=147;SRP=322.217;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:20,3:20:772:3:123:-4.5411,0,-62.8607 0/0:32:32,0:32:1281:0:0:0,-9.63296,-115.555 0/0:13:13,0:13:533:0:0:0,-3.91339,-48.3159 0/0:25:25,0:25:1003:0:0:0,-7.52575,-90.5625 0/0:31:31,0:31:1239:0:0:0,-9.33193,-111.782 0/0:26:26,0:26:1042:0:0:0,-7.82678,-94.0702 dDocent_Contig_6466 59 . G T 122.868 . AB=0.135135;ABP=88.5781;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=434;DPB=434;DPRA=1.39062;EPP=26.8965;EPPR=921.543;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.727273;PAIREDR=0.903073;PAO=0;PQA=0;PQR=0;PRO=0;QA=435;QR=16623;RO=423;RPL=11;RPP=26.8965;RPPR=921.543;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=423;SRP=921.543;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:60:60,0:60:2377:0:0:0,-18.0618,-214.085 0/0:77:77,0:77:3027:0:0:0,-23.1793,-272.518 0/0:48:48,0:48:1882:0:0:0,-14.4494,-169.584 0/0:71:71,0:71:2771:0:0:0,-21.3731,-249.515 0/1:74:64,10:64:2557:10:397:-13.8097,0,-207.988 0/0:104:103,1:103:4009:1:38:0,-27.5098,-356.994 dDocent_Contig_6467 12 . T G 5072.07 . AB=0.231445;ABP=644.485;AC=6;AF=0.5;AN=12;AO=237;CIGAR=1X;DP=1024;DPB=1024;DPRA=0;EPP=517.649;EPPR=1709.79;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9170;QR=31141;RO=786;RPL=0;RPP=517.649;RPPR=1709.79;RPR=237;RUN=1;SAF=237;SAP=517.649;SAR=0;SRF=786;SRP=1709.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:157:134,23:134:5314:23:834:-28.0902,0,-430.87 0/1:182:147,35:147:5821:35:1383:-69.9469,0,-468.906 0/1:208:167,40:167:6656:40:1543:-76.4117,0,-536.051 0/1:189:155,34:155:6129:34:1342:-64.153,0,-494.499 0/1:124:66,58:66:2570:58:2243:-164.731,0,-194.112 0/1:164:117,47:117:4651:47:1825:-115.096,0,-369.143 dDocent_Contig_6468 24 . G T 3578.13 . AB=0.252951;ABP=317.376;AC=3;AF=0.25;AN=12;AO=190;CIGAR=1X;DP=1214;DPB=1214;DPRA=0;EPP=415.59;EPPR=2226.6;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7612;QR=40658;RO=1024;RPL=0;RPP=415.59;RPPR=2226.6;RPR=190;RUN=1;SAF=190;SAP=415.59;SAR=0;SRF=1024;SRP=2226.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:186:177,9:177:6995:9:358:0,-23.4102,-596.675 0/1:224:187,37:187:7432:37:1473:-65.3778,0,-601.089 0/0:179:167,12:167:6678:12:484:0,-9.97385,-556.802 0/0:256:237,19:237:9424:19:759:0,-8.43035,-778.962 0/1:170:137,33:137:5401:33:1334:-69.1435,0,-434.773 0/1:199:119,80:119:4728:80:3204:-228.513,0,-365.542 dDocent_Contig_6469 21 . G A 1598.56 . AB=0.15674;ABP=655.963;AC=1;AF=0.0833333;AN=12;AO=125;CIGAR=1X;DP=3921;DPB=3921;DPRA=0.693166;EPP=274.444;EPPR=8241.58;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999473;PAO=0;PQA=0;PQR=0;PRO=0;QA=4908;QR=149701;RO=3794;RPL=0;RPP=274.444;RPPR=8241.58;RPR=125;RUN=1;SAF=125;SAP=274.444;SAR=0;SRF=3794;SRP=8241.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:558:557,1:557:21947:1:36:0,-164.376,-1969.88 0/0:698:693,3:693:27330:3:119:0,-198.802,-2446.31 0/0:521:512,9:512:20244:9:363:0,-123.802,-1787.31 0/0:628:616,12:616:24274:12:463:0,-147.029,-2140.63 0/0:878:878,0:878:34731:0:0:0,-264.304,-3122.74 0/1:638:538,100:538:21175:100:3927:-161.379,0,-1711.99 dDocent_Contig_6470 90 . G A 987.466 . AB=0.139168;ABP=791.249;AC=1;AF=0.0833333;AN=12;AO=162;CIGAR=1X;DP=4018;DPB=4018;DPRA=0.818241;EPP=354.789;EPPR=8371.86;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=59.9997;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999222;PAO=0;PQA=0;PQR=0;PRO=0;QA=5729;QR=130638;RO=3854;RPL=162;RPP=354.789;RPPR=8371.86;RPR=0;RUN=1;SAF=162;SAP=354.789;SAR=0;SRF=3854;SRP=8371.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:597:597,0:597:20145:0:0:0,-179.715,-1812.77 0/0:698:672,25:672:22822:25:885:0,-130.199,-1973.64 0/0:374:340,34:340:11467:34:1189:0,-5.27167,-924.7 0/1:697:600,97:600:20314:97:3443:-100.269,0,-1618.15 0/0:725:719,6:719:24416:6:212:0,-198.822,-2177.59 0/0:927:926,0:926:31474:0:0:0,-278.754,-2831.68 dDocent_Contig_6471 1 . N G 53.1697 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=56;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:56:-5.31588,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6472 88 . T C 88.0604 . AB=0.125984;ABP=157.322;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=1038;DPB=1038;DPRA=0.697036;EPP=37.7539;EPPR=2213.57;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=536;QR=31972;RO=1018;RPL=16;RPP=37.7539;RPPR=2213.57;RPR=0;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=1018;SRP=2213.57;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:222:222,0:222:7020:0:0:0,-66.8287,-631.956 0/0:174:172,0:172:5313:0:0:0,-51.7772,-478.294 0/0:157:157,0:157:4853:0:0:0,-47.2617,-436.974 0/0:199:198,0:198:6230:0:0:0,-59.6039,-560.803 0/1:127:111,16:111:3567:16:536:-10.3289,0,-283.036 0/0:159:158,0:158:4989:0:0:0,-47.5627,-449.112 dDocent_Contig_6473 10 . T A 2245.28 . AB=0.390909;ABP=25.7515;AC=5;AF=0.416667;AN=12;AO=91;CIGAR=1X;DP=281;DPB=281;DPRA=0;EPP=200.614;EPPR=413.419;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.78022;PAIREDR=0.910053;PAO=0;PQA=0;PQR=0;PRO=0;QA=3514;QR=7104;RO=189;RPL=0;RPP=200.614;RPPR=413.419;RPR=91;RUN=1;SAF=91;SAP=200.614;SAR=0;SRF=189;SRP=413.419;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:61:55,5:55:2057:5:199:0,-0.156519,-167.068 0/1:50:16,34:16:609:34:1333:-105.183,0,-40.0956 0/1:35:22,13:22:856:13:502:-34.9887,0,-66.8208 0/1:47:35,12:35:1243:12:452:-26.8758,0,-97.9984 0/1:52:36,16:36:1392:16:591:-37.8546,0,-109.905 0/1:36:25,11:25:947:11:437:-28.8481,0,-74.6932 dDocent_Contig_6474 89 . T G 61101.6 . AB=0.829575;ABP=2555.06;AC=6;AF=0.5;AN=12;AO=2244;CIGAR=1X4M;DP=2705;DPB=2705;DPRA=0;EPP=4875.79;EPPR=830.341;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.999554;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=76798;QR=13287;RO=381;RPL=2244;RPP=4875.79;RPPR=830.341;RPR=0;RUN=1;SAF=2244;SAP=4875.79;SAR=0;SRF=381;SRP=830.341;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:272:67,15,190:67:2339:15,190:515,6520:-509.222,-487.573,-673.314,0,-148.443,-133.064 0|1:436:48,22,365:48:1675:22,365:737,12468:-997.4,-952.164,-1081.78,0,-76.5686,-26.3742 0|1:477:97,4,374:97:3374:4,374:135,12797:-1009.54,-1027.8,-1300.94,0,-263.419,-161.775 0|1:473:46,15,412:46:1581:15,412:472,14050:-1126.2,-1102.09,-1225.96,0,-90.4635,-4.38495 0|1:482:44,0,417:44:1544:0,417:0,14265:-1144.63,-1157.87,-1283.53,0,-125.673,-0.143947 0|1:565:79,0,486:79:2774:0,486:0,16698:-1332.54,-1356.32,-1582.09,0,-226.124,-79.8237 dDocent_Contig_6475 33 . C T 69370.1 . AB=0.0490094;ABP=3391.44;AC=0;AF=0;AN=12;AO=94;CIGAR=12M2I2M1X;DP=4687;DPB=5362.6;DPRA=0;EPP=207.129;EPPR=3655.45;GTI=0;LEN=1;MEANALT=16;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.997633;PAO=0;PQA=0;PQR=0;PRO=0;QA=3697;QR=66068;RO=1690;RPL=0;RPP=207.129;RPPR=3672.8;RPR=94;RUN=1;SAF=94;SAP=207.129;SAR=0;SRF=1688;SRP=3655.45;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:698:286,0,37,283,66:286:11205:0,37,283,66:0,1358,10425,2447:-766.213,-852.308,-1773.7,-741.32,-1662.71,-1651.57,0,-921.399,-810.414,-836.208,-652.126,-1573.52,-1462.53,-721.22,-1553.65 0|0:755:325,0,28,348,43:325:12710:0,28,348,43:0,1038,12725,1578:-941.718,-1039.55,-2084.53,-954.634,-1999.62,-1991.19,0,-1045,-960.084,-940.243,-910.589,-1955.57,-1870.65,-916.04,-1942.63 0|0:546:166,0,19,320,35:166:6511:0,19,320,35:0,693,11928,1305:-926.335,-976.306,-1511.76,-919.71,-1455.16,-1449.44,0,-535.468,-478.873,-439.138,-869.499,-1404.95,-1348.35,-428.663,-1394.41 0|0:770:314,0,27,384,8:314:12262:0,27,384,8:0,992,14310,303:-1076.74,-1171.26,-2179.27,-1090.18,-2098.18,-2090.06,0,-1008.02,-926.935,-892.423,-1146.43,-2154.43,-2073.35,-983.181,-2152.02 0|0:985:365,32,0,562,14:365:14251:32,0,562,14:1254,0,21065,527:-1615.18,-1621.94,-2783.8,-1725.06,-2793.43,-2896.55,0,-1068.39,-1171.51,-1002.33,-1681.89,-2750.26,-2853.37,-1128.33,-2849.16 0|0:933:234,62,0,557,64:234:9129:62,0,557,64:2443,0,20686,2374:-1622.05,-1491.5,-2223.23,-1692.49,-2241.9,-2442.88,0,-549.416,-750.399,-582.725,-1498.28,-2047.69,-2248.68,-556.195,-2229.41 dDocent_Contig_6476 91 . G A 568.667 . AB=0.125776;ABP=786.372;AC=1;AF=0.0833333;AN=12;AO=163;CIGAR=1X;DP=3158;DPB=3158;DPRA=1.00996;EPP=356.96;EPPR=6502.23;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=59.9957;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998998;PAO=0;PQA=0;PQR=0;PRO=0;QA=5625;QR=102729;RO=2993;RPL=163;RPP=356.96;RPPR=6502.23;RPR=0;RUN=1;SAF=163;SAP=356.96;SAR=0;SRF=2993;SRP=6502.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:522:521,0:521:17958:0:0:0,-156.837,-1615.9 0/0:616:573,43:573:19630:43:1477:0,-52.2081,-1633.18 0/0:273:263,10:263:9021:10:336:0,-51.6156,-781.372 0/0:508:504,3:504:17290:3:105:0,-143.176,-1546.04 0/1:644:563,81:563:19310:81:2800:-58.3896,0,-1543.75 0/0:595:569,26:569:19520:26:907:0,-97.1654,-1674.56 dDocent_Contig_6477 11 . T C 5068.64 . AB=0.337955;ABP=134.612;AC=6;AF=0.5;AN=12;AO=195;CIGAR=1X;DP=577;DPB=577;DPRA=0;EPP=426.447;EPPR=832.513;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.692308;PAIREDR=0.374346;PAO=0;PQA=0;PQR=0;PRO=0;QA=7668;QR=14903;RO=382;RPL=0;RPP=426.447;RPPR=832.513;RPR=195;RUN=1;SAF=195;SAP=426.447;SAR=0;SRF=382;SRP=832.513;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:99:72,27:72:2810:27:1054:-65.3536,0,-223.238 0/1:117:76,41:76:2982:41:1595:-108.581,0,-233.281 0/1:47:40,7:40:1555:7:282:-11.6046,0,-126.055 0/1:119:71,48:71:2726:48:1891:-134.584,0,-209.669 0/1:114:74,40:74:2902:40:1575:-107.68,0,-226.993 0/1:81:49,32:49:1928:32:1271:-90.2823,0,-149.354 dDocent_Contig_6478 10 . T A 33442.8 . AB=0.129301;ABP=3160.08;AC=0;AF=0;AN=12;AO=342;CIGAR=1M1X9M;DP=2645;DPB=2186.45;DPRA=0;EPP=745.654;EPPR=2159.28;GTI=0;LEN=1;MEANALT=4.66667;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0.950292;PAIREDR=0.996979;PAO=0;PQA=0;PQR=0;PRO=0;QA=13630;QR=38622;RO=993;RPL=0;RPP=745.654;RPPR=2159.28;RPR=342;RUN=1;SAF=342;SAP=745.654;SAR=0;SRF=993;SRP=2159.28;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:394:209,139,20,24,0:209:8093:139,20,24,0:5030,754,942,0:-347.64,0,-622.948,-348.77,-603.009,-1007.55,-333.085,-587.324,-936.1,-990.659,-410.555,-664.792,-1013.57,-997.883,-1075.35 0|0:514:219,179,0,106,4:219:8554:179,0,106,4:6542,0,4261,163:-468.57,0,-649.318,-534.495,-703.202,-1237.71,-183.35,-352.066,-886.571,-854.662,-521.048,-689.755,-1224.26,-873.124,-1223.06 0|0:204:72,91,0,19,19:72:2820:91,0,19,19:3377,0,769,753:-254.643,0,-204.485,-276.317,-231.878,-508.205,-212.907,-168.471,-444.797,-439.078,-214.338,-169.902,-446.227,-382.819,-440.508 0|0:418:163,141,0,97,16:163:6327:141,0,97,16:5123,0,3841,642:-369.25,0,-477.393,-418.318,-519.838,-938.165,-102.195,-203.724,-622.048,-592.849,-365.42,-466.942,-885.268,-569.151,-880.451 0|0:566:157,353,0,54,0:157:6099:353,0,54,0:12858,0,2119,0:-1002.93,0,-394.881,-1050.19,-501.145,-1551.34,-875.941,-326.893,-1377.09,-1360.84,-1050.19,-501.145,-1551.34,-1377.09,-1551.34 0|0:549:173,328,0,42,4:173:6729:328,0,42,4:11822,0,1698,158:-912.466,0,-454.226,-964.544,-552.964,-1517.52,-824.546,-412.968,-1377.53,-1364.89,-951.543,-539.963,-1504.52,-1364.53,-1503.32 dDocent_Contig_6479 24 . G A 4411.08 . AB=0.056;ABP=645.123;AC=0;AF=0;AN=12;AO=21;CIGAR=1M1X2M;DP=774;DPB=774;DPRA=0;EPP=48.6112;EPPR=1095.26;GTI=0;LEN=1;MEANALT=3.33333;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.992048;PAO=0;PQA=0;PQR=0;PRO=0;QA=833;QR=19689;RO=503;RPL=0;RPP=48.6112;RPPR=1095.26;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=503;SRP=1095.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:172:106,5,0,61,0:106:4145:5,0,61,0:198,0,2341,0:-160.19,-175.802,-515.072,-192.099,-516.578,-532.874,0,-324.47,-340.767,-322.404,-192.099,-516.578,-532.874,-340.767,-532.874 0|0:161:67,49,12,33,0:67:2609:49,12,33,0:1897,470,1292,0:-135.654,0,-199.659,-117.179,-175.765,-327.977,-49.5962,-108.183,-225.363,-254.073,-155.823,-214.409,-331.589,-264.007,-370.234 0|0:90:71,0,4,3,11:71:2785:0,4,3,11:0,162,121,445:-15.3184,-36.6915,-265.704,-23.333,-252.346,-251.142,-26.7173,-255.73,-242.371,-254.827,0,-229.013,-215.654,-219.038,-225.701 0|0:124:76,5,5,38,0:76:2972:5,5,38,0:185,201,1485,0:-99.1961,-106.947,-349.785,-105.509,-334.726,-348.35,0,-229.22,-227.784,-232.91,-122.074,-351.291,-349.855,-244.349,-366.42 0|0:61:52,9,0,0,0:52:2026:9,0,0,0:347,0,0,0:-13.2256,0,-164.186,-28.8792,-166.896,-195.389,-28.8792,-166.896,-195.389,-195.389,-28.8792,-166.896,-195.389,-195.389,-195.389 0|0:166:131,22,0,13,0:131:5152:22,0,13,0:832,0,517,0:-28.746,0,-417.145,-68.1809,-423.768,-491.959,-25.6058,-381.2,-449.391,-445.477,-68.1809,-423.768,-491.959,-449.391,-491.959 dDocent_Contig_6480 21 . G A 780.019 . AB=0.108583;ABP=1289.84;AC=2;AF=0.166667;AN=12;AO=128;CIGAR=1X;DP=2999;DPB=2999;DPRA=0.873168;EPP=280.959;EPPR=6232.96;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5061;QR=114062;RO=2869;RPL=0;RPP=280.959;RPPR=6232.96;RPR=128;RUN=1;SAF=128;SAP=280.959;SAR=0;SRF=2869;SRP=6232.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:427:426,1:426:16941:1:41:0,-124.445,-1519.25 0/0:513:491,22:491:19577:22:886:0,-74.3794,-1680.25 0/1:346:300,46:300:11965:46:1813:-59.2288,0,-971.832 0/1:621:561,59:561:22259:59:2321:-21.995,0,-1814.35 0/0:443:443,0:443:17616:0:0:0,-133.356,-1583.99 0/0:649:648,0:648:25704:0:0:0,-195.067,-2310.71 dDocent_Contig_6481 20 . A G 199.751 . AB=0.189655;ABP=51.5315;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=309;DPB=309;DPRA=1.3956;EPP=33.4109;EPPR=643.595;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99322;PAO=0;PQA=0;PQR=0;PRO=0;QA=542;QR=11682;RO=295;RPL=0;RPP=33.4109;RPPR=643.595;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=295;SRP=643.595;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:53:53,0:53:2104:0:0:0,-15.9546,-189.55 0/0:53:53,0:53:2084:0:0:0,-15.9546,-187.752 0/0:41:41,0:41:1646:0:0:0,-12.3422,-148.368 0/0:35:35,0:35:1406:0:0:0,-10.536,-126.791 0/0:69:66,3:66:2579:3:113:0,-10.2351,-221.707 0/1:58:47,11:47:1863:11:429:-21.498,0,-150.421 dDocent_Contig_6482 18 . G T 3106.38 . AB=0.057554;ABP=239.357;AC=0;AF=0;AN=12;AO=8;CIGAR=4M2X1M;DP=589;DPB=592.286;DPRA=0;EPP=20.3821;EPPR=910.686;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.995215;PAO=0;PQA=0;PQR=0;PRO=0;QA=323;QR=16250;RO=418;RPL=0;RPP=20.3821;RPPR=910.686;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=418;SRP=910.686;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:87:54,4,5,24:54:2056:4,5,24:139,201,956:-62.4764,-67.4407,-234.852,-62.1666,-219.491,-229.281,0,-157.334,-152.064,-161.405 0|0:92:49,11,0,32:49:1926:11,0,32:425,0,1267:-89.526,-69.374,-224.48,-104.276,-227.791,-262.695,0,-123.521,-158.425,-148.792 0|0:69:47,5,0,16:47:1836:5,0,16:177,0,650:-39.53,-39.2725,-188.701,-53.6784,-190.207,-204.618,0,-136.59,-151.001,-146.185 0|0:52:28,3,3,17:28:1088:3,3,17:121,122,671:-46.7721,-45.226,-133.716,-45.1364,-124.555,-133.627,0,-79.4104,-79.3209,-84.268 0|0:172:153,0,0,17:153:5923:0,0,17:0,0,680:-9.96098,-56.0186,-542.542,-56.0186,-542.542,-542.542,0,-486.531,-486.531,-481.414 0|0:117:87,0,0,30:87:3421:0,0,30:0,0,1206:-73.5943,-99.7839,-381.178,-99.7839,-381.178,-381.178,0,-281.793,-281.793,-272.762 dDocent_Contig_6483 27 . C A 57.3518 . AB=0.16;ABP=28.1125;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=118;DPB=118;DPRA=1.34409;EPP=11.6962;EPPR=250.558;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=160;QR=4553;RO=114;RPL=0;RPP=11.6962;RPPR=250.558;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=114;SRP=250.558;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:709:0:0:0,-5.41854,-64.1356 0/0:11:11,0:11:447:0:0:0,-3.31133,-40.5859 0/0:20:20,0:20:803:0:0:0,-6.0206,-72.5882 0/1:25:21,4:21:843:4:160:-7.25805,0,-68.657 0/0:24:24,0:24:970:0:0:0,-7.22472,-87.5983 0/0:20:20,0:20:781:0:0:0,-6.0206,-70.5991 dDocent_Contig_6484 39 . C A 848.498 . AB=0.23494;ABP=104.311;AC=2;AF=0.166667;AN=12;AO=42;CIGAR=1X;DP=471;DPB=471;DPRA=0.953704;EPP=94.2121;EPPR=923.715;GTI=0;LEN=1;MEANALT=1.5;MQM=55.6667;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.880952;PAIREDR=0.971698;PAO=0;PQA=0;PQR=0;PRO=0;QA=1638;QR=17035;RO=424;RPL=0;RPP=94.2121;RPPR=923.715;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=424;SRP=923.715;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:67:67,0:67:2673:0:0:0,-20.169,-240.693 0/0:95:94,0:94:3801:0:0:0,-28.2968,-341.947 0/0:59:56,1:56:2223:1:40:0,-15.7102,-198.646 0/0:84:82,2:82:3304:2:73:0,-23.1987,-295.315 0/1:93:72,21:72:2904:21:826:-46.3595,0,-233.448 0/1:73:53,18:53:2130:18:699:-41.7122,0,-170.374 dDocent_Contig_6485 24 . C A 62.0883 . AB=0.100719;ABP=195.49;AC=1;AF=0.0833333;AN=12;AO=22;CIGAR=1X;DP=754;DPB=754;DPRA=1.07128;EPP=50.7827;EPPR=1564.3;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=53.5076;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.840056;PAO=0;PQA=0;PQR=0;PRO=0;QA=847;QR=28040;RO=719;RPL=0;RPP=50.7827;RPPR=1564.3;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=719;SRP=1564.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:81:77,0:77:2976:0:0:0,-23.1793,-246.942 0/0:127:127,0:127:4922:0:0:0,-38.2308,-406.832 0/0:182:181,0:181:7133:0:0:0,-54.4864,-616.684 0/0:101:101,0:101:3902:0:0:0,-30.404,-324.75 0/0:124:113,8:113:4384:8:314:0,-7.99343,-300.462 0/1:139:120,14:120:4723:14:533:-7.73171,0,-347.218 dDocent_Contig_6486 19 . G C 976.128 . AB=0.155718;ABP=426.152;AC=2;AF=0.166667;AN=12;AO=64;CIGAR=1X;DP=967;DPB=967;DPRA=1.47842;EPP=141.985;EPPR=1963.85;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.984375;PAIREDR=0.968992;PAO=0;PQA=0;PQR=0;PRO=0;QA=2489;QR=34730;RO=903;RPL=0;RPP=141.985;RPPR=1963.85;RPR=64;RUN=1;SAF=64;SAP=141.985;SAR=0;SRF=903;SRP=1963.85;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:138:138,0:138:5291:0:0:0,-41.5421,-476.167 0/0:182:182,0:182:6960:0:0:0,-54.7875,-626.247 0/0:109:109,0:109:4194:0:0:0,-32.8123,-377.512 0/0:127:127,0:127:4914:0:0:0,-38.2308,-442.242 0/1:194:166,28:166:6353:28:1084:-39.4499,0,-513.242 0/1:217:181,36:181:7018:36:1405:-61.3848,0,-566.113 dDocent_Contig_6487 31 . A G 727.651 . AB=0.157534;ABP=300.472;AC=3;AF=0.25;AN=12;AO=66;CIGAR=1X;DP=630;DPB=630;DPRA=0;EPP=146.327;EPPR=1225.55;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2607;QR=22335;RO=563;RPL=0;RPP=146.327;RPPR=1225.55;RPR=66;RUN=1;SAF=66;SAP=146.327;SAR=0;SRF=563;SRP=1225.55;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:96:86,10:86:3379:10:407:-8.09151,0,-275.28 0/0:110:101,9:101:4033:9:341:0,-2.07159,-331.906 0/0:95:92,3:92:3632:3:117:0,-17.6882,-316.011 0/0:133:124,8:124:4957:8:317:0,-11.1259,-417.133 0/1:95:72,23:72:2871:23:914:-53.9654,0,-229.884 0/1:101:88,13:88:3463:13:511:-15.9301,0,-281.324 dDocent_Contig_6488 80 . C T 908.808 . AB=0.109976;ABP=1685;AC=2;AF=0.166667;AN=12;AO=193;CIGAR=3M1X3M;DP=3082;DPB=3069.29;DPRA=0;EPP=422.104;EPPR=5809.53;GTI=0;LEN=1;MEANALT=8;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.989637;PAIREDR=0.997756;PAO=0;PQA=0;PQR=0;PRO=0;QA=6538;QR=89979;RO=2674;RPL=193;RPP=422.104;RPPR=5809.53;RPR=0;RUN=1;SAF=193;SAP=422.104;SAR=0;SRF=2674;SRP=5809.53;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:319:231,25,56,0:231:7741:25,56,0:823,1868,0:-81.6711,-84.6899,-704.096,0,-560.419,-610.08,-151.209,-711.622,-626.938,-778.141 0|1:377:331,1,39,0:331:11147:1,39,0:26,1346,0:-9.75166,-107.356,-1010.32,0,-901.263,-891.561,-109.393,-1010.62,-903.301,-1012.66 0|0:403:342,10,19,13:342:11547:10,19,13:324,657,453:0,-76.8131,-1009.74,-49.5589,-959.359,-979.78,-66.1076,-975.907,-948.659,-998.134 0|0:577:429,42,45,48:429:14420:42,45,48:1393,1525,1648:-4.67975,-21.1364,-1176.73,-10.1644,-1065.72,-1164.86,0,-1055.56,-1044.59,-1153.79 0|0:823:779,0,22,1:779:26251:0,22,1:0,753,7:0,-234.502,-2361.86,-173.338,-2300.73,-2294.11,-234.179,-2361.53,-2300.4,-2361.23 0|0:583:562,0,12,1:562:18873:0,12,1:0,389,33:0,-169.179,-1698.05,-137.769,-1666.67,-1663.05,-166.509,-1695.38,-1664,-1695.08 dDocent_Contig_6489 64 . C A 2415.36 . AB=0.148148;ABP=1193.38;AC=1;AF=0.0833333;AN=12;AO=235;CIGAR=1X;DP=5347;DPB=5347;DPRA=1.37883;EPP=513.306;EPPR=11101.4;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9986;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9136;QR=203154;RO=5111;RPL=235;RPP=513.306;RPPR=11101.4;RPR=0;RUN=1;SAF=235;SAP=513.306;SAR=0;SRF=5111;SRP=11101.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:823:823,0:823:32772:0:0:0,-247.748,-2946.55 0/0:924:924,0:924:36523:0:0:0,-278.152,-3283.81 0/0:609:609,0:609:24309:0:0:0,-183.327,-2185.71 0/0:809:808,0:808:32105:0:0:0,-243.232,-2886.17 0/1:1107:943,164:943:37482:164:6406:-243.059,0,-3036.74 0/0:1075:1004,71:1004:39963:71:2730:0,-77.7733,-3347.16 dDocent_Contig_6490 98 . N T 2680.25 . AB=0.285714;ABP=44.8887;AC=12;AF=1;AN=12;AO=31;CIGAR=3X;DP=160;DPB=319.667;DPRA=1.32381;EPP=70.3259;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=24.9677;MQMR=0;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0;PAO=239.5;PQA=8131.5;PQR=0;PRO=0;QA=1033;QR=0;RO=0;RPL=31;RPP=70.3259;RPPR=0;RPR=0;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:21:0,12,9:0:0:12,9:362,286:-40.7143,-16.8708,-13.2585,-22.9475,0,-20.2382 1|1:25:0,20,5:0:0:20,5:653,170:-45.3689,-8.94591,-2.92531,-35.7767,0,-34.2716 1|1:30:0,21,9:0:0:21,9:702,308:-44.0197,-13.0349,-6.71326,-28.3968,0,-25.6875 1|1:29:0,22,7:0:0:22,7:727,235:-45.5468,-8.86425,-2.24159,-32.5395,0,-30.4323 1|1:21:0,21,0:0:0:21,0:695,0:-33.4454,-6.32163,0,-33.4454,-6.32163,-33.4454 1|1:34:0,33,1:0:0:33,1:1054,34:-66.1045,-9.93399,0,-64.715,-12.2397,-64.414 dDocent_Contig_6491 12 . C T 12949.9 . AB=0.318832;ABP=501.056;AC=2;AF=0.166667;AN=12;AO=607;CIGAR=1X;DP=5511;DPB=5511;DPRA=1.22587;EPP=1321.09;EPPR=10636.7;GTI=0;LEN=1;MEANALT=1.4;MQM=58.8764;MQMR=57.241;NS=6;NUMALT=1;ODDS=0;PAIRED=0.00329489;PAIREDR=0.488472;PAO=0;PQA=0;PQR=0;PRO=0;QA=22091;QR=191404;RO=4901;RPL=0;RPP=1321.09;RPPR=10645.4;RPR=607;RUN=1;SAF=607;SAP=1321.09;SAR=0;SRF=4900;SRP=10636.7;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:933:918,15:918:35784:15:533:0,-234.213,-3065.01 0/0:1060:1034,25:1034:40312:25:902:0,-240.419,-3493.33 0/0:773:772,0:772:30232:0:0:0,-232.395,-2658.58 0/0:998:987,10:987:38512:10:371:0,-266.754,-3361.86 0/1:737:495,242:495:19325:242:8815:-570.862,0,-1440.28 0/1:1010:695,315:695:27239:315:11470:-727.35,0,-2043.72 dDocent_Contig_6492 1 . N G 626.094 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=19;CIGAR=1X;DP=19;DPB=19;DPRA=0;EPP=36.0395;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0526316;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=664;QR=0;RO=0;RPL=0;RPP=44.2683;RPPR=0;RPR=19;RUN=1;SAF=1;SAP=36.0395;SAR=18;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:140:-12.9443,-1.20412,0 1/1:6:0,6:0:0:6:210:-19.2425,-1.80618,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:4:0,4:0:0:4:140:-12.9449,-1.20412,0 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_6493 20 . G T 4370.13 . AB=0.477064;ABP=4.50443;AC=2;AF=0.166667;AN=12;AO=156;CIGAR=1X;DP=906;DPB=906;DPRA=1.12953;EPP=341.76;EPPR=1631.61;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5982;QR=29714;RO=750;RPL=0;RPP=341.76;RPPR=1631.61;RPR=156;RUN=1;SAF=156;SAP=341.76;SAR=0;SRF=750;SRP=1631.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:135:135,0:135:5346:0:0:0,-40.639,-481.002 0/0:126:126,0:126:5019:0:0:0,-37.9298,-451.604 0/0:172:172,0:172:6857:0:0:0,-51.7772,-616.826 0/0:146:146,0:146:5754:0:0:0,-43.9504,-517.696 0/1:166:62,104:62:2445:104:4005:-310.541,0,-170.229 0/1:161:109,52:109:4293:52:1977:-129.694,0,-337.879 dDocent_Contig_6494 50 . A T 169.579 . AB=0.114458;ABP=217.332;AC=1;AF=0.0833333;AN=12;AO=22;CIGAR=1X;DP=806;DPB=806;DPRA=0.985222;EPP=50.7827;EPPR=1698.93;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997439;PAO=0;PQA=0;PQR=0;PRO=0;QA=880;QR=30909;RO=781;RPL=22;RPP=50.7827;RPPR=1698.93;RPR=0;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=781;SRP=1698.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:141:141,0:141:5572:0:0:0,-42.4452,-501.327 0/0:137:135,1:135:5368:1:41:0,-37.255,-478.879 0/0:91:91,0:91:3629:0:0:0,-27.3937,-326.645 0/0:174:172,0:172:6817:0:0:0,-51.7772,-612.873 0/0:97:95,2:95:3745:2:82:0,-21.4202,-329.287 0/1:166:147,19:147:5778:19:757:-18.4808,0,-469.879 dDocent_Contig_6495 10 . T A 4055.44 . AB=0.270665;ABP=284.876;AC=5;AF=0.416667;AN=12;AO=175;CIGAR=1X;DP=743;DPB=743;DPRA=0;EPP=383.018;EPPR=1232.06;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6980;QR=20608;RO=566;RPL=0;RPP=383.018;RPPR=1232.06;RPR=175;RUN=1;SAF=175;SAP=383.018;SAR=0;SRF=566;SRP=1232.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:65:45,20:45:1653:20:800:-52.7487,0,-129.471 0/1:135:94,41:94:3443:41:1629:-106.203,0,-269.403 0/1:141:105,36:105:3818:36:1452:-88.4809,0,-301.329 0/1:170:123,47:123:4481:47:1867:-117.056,0,-352.217 0/1:106:82,23:82:2958:23:911:-50.277,0,-234.402 0/0:126:117,8:117:4255:8:321:0,-8.50389,-353.844 dDocent_Contig_6496 20 . T A 23007.9 . AB=0.64943;ABP=224.308;AC=6;AF=0.5;AN=12;AO=741;CIGAR=1X;DP=1141;DPB=1141;DPRA=0;EPP=1612.07;EPPR=871.599;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=29513;QR=15945;RO=400;RPL=0;RPP=1612.07;RPPR=871.599;RPR=741;RUN=1;SAF=741;SAP=1612.07;SAR=0;SRF=400;SRP=871.599;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:150:32,118:32:1268:118:4697:-377.485,0,-69.2377 0/1:222:50,172:50:2004:172:6855:-549.81,0,-113.719 0/1:146:49,97:49:1977:97:3834:-301.105,0,-134.173 0/1:242:86,156:86:3445:156:6176:-482.759,0,-237.236 0/1:178:95,83:95:3777:83:3326:-245.806,0,-286.373 0/1:203:88,115:88:3474:115:4625:-355.048,0,-251.607 dDocent_Contig_6497 1 . N G 77.8076 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 dDocent_Contig_6498 35 . G A 522.807 . AB=0.45;ABP=3.87889;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1X;DP=231;DPB=231;DPRA=1.25352;EPP=44.2683;EPPR=463.362;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.947368;PAIREDR=0.976415;PAO=0;PQA=0;PQR=0;PRO=0;QA=769;QR=8297;RO=212;RPL=0;RPP=44.2683;RPPR=463.362;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=212;SRP=463.362;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:44,0:44:1743:0:0:0,-13.2453,-157.086 0/0:78:78,0:78:3066:0:0:0,-23.4803,-276.034 0/0:7:7,0:7:281:0:0:0,-2.10721,-25.6611 0/1:40:22,18:22:870:18:728:-53.8036,0,-66.5691 0/0:13:13,0:13:498:0:0:0,-3.91339,-45.153 0/0:49:48,1:48:1839:1:41:0,-10.6559,-161.633 dDocent_Contig_6499 37 . C T 5043.12 . AB=0.140613;ABP=2859.27;AC=4;AF=0.333333;AN=12;AO=388;CIGAR=1X;DP=3441;DPB=3441;DPRA=0;EPP=845.542;EPPR=6628.17;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999672;PAO=0;PQA=0;PQR=0;PRO=0;QA=15377;QR=121235;RO=3051;RPL=0;RPP=845.542;RPPR=6628.17;RPR=388;RUN=1;SAF=388;SAP=845.542;SAR=0;SRF=3051;SRP=6628.17;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:407:385,22:385:15374:22:861:0,-44.7208,-1304.67 0/0:488:480,8:480:19027:8:324:0,-117.373,-1681.38 0/1:373:340,33:340:13530:33:1326:-7.31847,0,-1104.42 0/1:566:496,68:496:19636:68:2721:-75.1431,0,-1595.8 0/1:880:770,110:770:30612:110:4376:-128.889,0,-2487.47 0/1:727:580,147:580:23056:147:5769:-300.183,0,-1854.24 dDocent_Contig_6500 39 . C A 752.584 . AB=0.19171;ABP=162.338;AC=1;AF=0.0833333;AN=12;AO=46;CIGAR=1X;DP=1258;DPB=1258;DPRA=0.953052;EPP=102.898;EPPR=2634.83;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9926;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.947195;PAO=0;PQA=0;PQR=0;PRO=0;QA=1851;QR=48356;RO=1212;RPL=0;RPP=102.898;RPPR=2634.83;RPR=46;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=1212;SRP=2634.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:136:136,0:136:5434:0:0:0,-40.9401,-488.897 0/0:315:315,0:315:12584:0:0:0,-94.8244,-1131.65 0/0:146:146,0:146:5792:0:0:0,-43.9504,-521.03 0/0:255:255,0:255:10198:0:0:0,-76.7626,-917.159 0/1:193:156,37:156:6185:37:1496:-76.7813,0,-498.322 0/0:213:204,9:204:8163:9:355:0,-31.8112,-701.892 dDocent_Contig_6501 39 . A C 271.636 . AB=0.117155;ABP=307.28;AC=1;AF=0.0833333;AN=12;AO=28;CIGAR=1X;DP=1359;DPB=1359;DPRA=1.06696;EPP=63.8115;EPPR=2893.24;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1115;QR=52890;RO=1331;RPL=0;RPP=63.8115;RPPR=2893.24;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=1331;SRP=2893.24;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:155:155,0:155:6165:0:0:0,-46.6596,-554.615 0/0:267:267,0:267:10610:0:0:0,-80.375,-954.202 0/0:185:185,0:185:7331:0:0:0,-55.6905,-659.434 0/0:253:253,0:253:10079:0:0:0,-76.1606,-906.469 0/0:260:260,0:260:10348:0:0:0,-78.2678,-930.66 0/1:239:211,28:211:8357:28:1115:-28.6864,0,-679.731 dDocent_Contig_6502 107 . N T 64.5902 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=68;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6503 44 . G A 17993.6 . AB=0.242323;ABP=1899.85;AC=5;AF=0.416667;AN=12;AO=852;CIGAR=1X;DP=3982;DPB=3982;DPRA=0;EPP=1844.43;EPPR=6797.55;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=59.9923;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999041;PAO=0;PQA=0;PQR=0;PRO=0;QA=33239;QR=121228;RO=3129;RPL=1;RPP=1844.43;RPPR=6797.55;RPR=851;RUN=1;SAF=852;SAP=1853.1;SAR=0;SRF=3129;SRP=6797.55;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:694:554,140:554:21283:140:5489:-284.951,0,-1705 0/0:693:638,55:638:24715:55:2134:0,-16.372,-2030.15 0/1:390:323,67:323:12610:67:2625:-118.994,0,-1016.65 0/1:640:552,88:552:21463:88:3454:-118.26,0,-1737.37 0/1:819:553,265:553:21475:265:10316:-681.534,0,-1684.79 0/1:746:509,237:509:19682:237:9221:-604.839,0,-1545.38 dDocent_Contig_6504 40 . T C 189.941 . AB=0.0980392;ABP=575.598;AC=1;AF=0.0833333;AN=12;AO=54;CIGAR=1X;DP=2191;DPB=2191;DPRA=0.853638;EPP=120.27;EPPR=4639.1;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992037;PAO=0;PQA=0;PQR=0;PRO=0;QA=2139;QR=84606;RO=2135;RPL=0;RPP=120.27;RPPR=4639.1;RPR=54;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=2135;SRP=4639.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:352:352,0:352:13941:0:0:0,-105.963,-1253.66 0/0:387:387,0:387:15373:0:0:0,-116.499,-1382.41 0/0:207:203,4:203:8006:4:157:0,-47.8068,-705.627 0/0:443:442,0:442:17530:0:0:0,-133.055,-1576.24 0/1:408:368,40:368:14563:40:1590:-20.5169,0,-1186.77 0/0:394:383,10:383:15193:10:392:0,-83.0679,-1330.61 dDocent_Contig_6505 199 . C T 353.673 . AB=0.160714;ABP=170.989;AC=4;AF=0.333333;AN=12;AO=27;CIGAR=1X;DP=235;DPB=235;DPRA=1.25373;EPP=61.6401;EPPR=454.677;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.774;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.995192;PAO=0;PQA=0;PQR=0;PRO=0;QA=1019;QR=7862;RO=208;RPL=27;RPP=61.6401;RPPR=454.677;RPR=0;RUN=1;SAF=0;SAP=61.6401;SAR=27;SRF=0;SRP=454.677;SRR=208;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:47:41,6:41:1522:6:234:-7.28269,0,-123.094 0/0:17:17,0:17:624:0:0:0,-5.11751,-56.4835 0/0:50:50,0:50:1910:0:0:0,-15.0515,-169.797 0/1:53:46,7:46:1751:7:263:-8.0738,0,-141.887 0/1:15:12,3:12:463:3:117:-6.39493,0,-37.5059 0/1:53:42,11:42:1592:11:405:-20.8377,0,-127.589 dDocent_Contig_6506 11 . C G 326.403 . AB=0.175;ABP=113.104;AC=3;AF=0.25;AN=12;AO=24;CIGAR=1X;DP=260;DPB=260;DPRA=0.906383;EPP=55.1256;EPPR=515.478;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.708333;PAIREDR=0.652542;PAO=0;PQA=0;PQR=0;PRO=0;QA=914;QR=9196;RO=236;RPL=0;RPP=55.1256;RPPR=515.478;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=236;SRP=515.478;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:21,5:21:833:5:198:-10.3708,0,-67.4617 0/0:47:47,0:47:1826:0:0:0,-14.1484,-164.57 0/0:39:37,2:37:1447:2:66:0,-5.47364,-124.224 0/0:54:53,1:53:2061:1:38:0,-12.4584,-181.901 0/1:41:35,6:35:1372:6:226:-8.35487,0,-111.402 0/1:53:43,10:43:1657:10:386:-19.1364,0,-133.413 dDocent_Contig_6507 98 . N C 311.007 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=11;CIGAR=1X;DP=11;DPB=11;DPRA=0;EPP=26.8965;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=321;QR=0;RO=0;RPL=11;RPP=26.8965;RPPR=0;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:3:0,3:0:0:3:61:-5.69202,-0.90309,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:95:-8.86398,-0.90309,0 1/1:2:0,2:0:0:2:60:-5.69857,-0.60206,0 dDocent_Contig_6508 39 . T A 97.3185 . AB=0.101604;ABP=260.812;AC=1;AF=0.0833333;AN=12;AO=34;CIGAR=1X;DP=1231;DPB=1231;DPRA=0.957075;EPP=76.8404;EPPR=2589.24;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.999163;PAO=0;PQA=0;PQR=0;PRO=0;QA=1330;QR=44488;RO=1195;RPL=0;RPP=76.8404;RPPR=2597.92;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=1194;SRP=2589.24;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:164:163,0:163:6050:0:0:0,-49.0679,-544.058 0/1:187:168,19:168:6179:19:747:-11.2547,0,-499.794 0/0:262:262,0:262:9808:0:0:0,-78.8699,-882.42 0/0:180:173,7:173:6444:7:275:0,-29.068,-554.802 0/0:235:227,8:227:8456:8:308:0,-42.6614,-732.78 0/0:203:202,0:202:7551:0:0:0,-60.8081,-679.385 dDocent_Contig_6509 37 . T C 1691.69 . AB=0.148704;ABP=788.725;AC=1;AF=0.0833333;AN=12;AO=203;CIGAR=1X;DP=4004;DPB=4004;DPRA=0.830631;EPP=443.819;EPPR=8252.43;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999737;PAO=0;PQA=0;PQR=0;PRO=0;QA=8023;QR=150593;RO=3799;RPL=0;RPP=443.819;RPPR=8252.43;RPR=203;RUN=1;SAF=203;SAP=443.819;SAR=0;SRF=3799;SRP=8252.43;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:634:611,22:611:24222:22:872:0,-112.165,-2099.12 0/0:705:677,27:677:26712:27:1088:0,-114.109,-2303.57 0/0:355:327,28:327:12958:28:1038:0,-13.1834,-1071.61 0/1:733:624,109:624:24814:109:4349:-170.692,0,-2010.46 0/0:800:783,17:783:31055:17:676:0,-179.66,-2730.98 0/0:777:777,0:777:30832:0:0:0,-233.9,-2772.1 dDocent_Contig_6510 10 . T C 11865.9 . AB=0.280742;ABP=722.891;AC=6;AF=0.5;AN=12;AO=484;CIGAR=4M1X;DP=1724;DPB=1750.8;DPRA=0;EPP=1054;EPPR=2374.26;GTI=0;LEN=1;MEANALT=3.83333;MQM=60;MQMR=59.9597;NS=6;NUMALT=2;ODDS=0;PAIRED=0.995868;PAIREDR=0.770147;PAO=0;PQA=0;PQR=0;PRO=0;QA=18592;QR=41413;RO=1092;RPL=0;RPP=1054;RPPR=2374.26;RPR=484;RUN=1;SAF=484;SAP=1054;SAR=0;SRF=1092;SRP=2374.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:268:163,12,91:163:6171:12,91:454,3513:-239.429,-251.28,-753.577,0,-468.696,-478.52 0|1:414:231,54,127:231:8788:54,127:1997,4891:-332.031,-238.216,-942.731,0,-557.427,-682.552 0|1:207:114,43,48:114:4347:43,48:1620,1863:-118.755,-20.3281,-363.424,0,-223.299,-341.598 0|1:338:170,23,142:170:6420:23,142:864,5445:-395.699,-376.095,-895.373,0,-455.438,-483.471 0|1:263:217,0,39:217:8240:0,39:0,1456:-53.9097,-119.233,-794.969,0,-675.778,-664.037 0|1:234:197,0,37:197:7447:0,37:0,1424:-57.9892,-117.292,-727.716,0,-610.807,-599.669 dDocent_Contig_6512 93 . A C 57.4656 . AB=0.104701;ABP=638.212;AC=1;AF=0.0833333;AN=12;AO=123;CIGAR=1X;DP=4909;DPB=4909;DPRA=0.716303;EPP=270.101;EPPR=10393.5;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999373;PAO=0;PQA=0;PQR=0;PRO=0;QA=4141;QR=169450;RO=4785;RPL=123;RPP=270.101;RPPR=10393.5;RPR=0;RUN=1;SAF=123;SAP=270.101;SAR=0;SRF=4785;SRP=10393.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:693:660,33:660:23312:33:1138:0,-105.887,-1994.73 0/0:895:878,17:878:31187:17:554:0,-219.254,-2755.71 0/1:468:419,49:419:14817:49:1643:-7.26944,0,-1192.37 0/0:835:811,24:811:28732:24:806:0,-178.511,-2512.18 0/0:984:984,0:984:34950:0:0:0,-296.214,-3144.37 0/0:1034:1033,0:1033:36452:0:0:0,-310.964,-3279.15 dDocent_Contig_6513 84 . G A 65.4687 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X2M1X1M2X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=72;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:2:0,2:0:0:2:72:-6.54578,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_6514 90 . G A 101.717 . AB=0.222222;ABP=27.1378;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=295;DPB=295;DPRA=0.95;EPP=29.068;EPPR=617.537;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=385;QR=9640;RO=283;RPL=12;RPP=29.068;RPPR=617.537;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=283;SRP=617.537;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:997:0:0:0,-8.72987,-90.0412 0/1:36:28,8:28:952:8:247:-11.6946,0,-75.1523 0/0:39:39,0:39:1310:0:0:0,-11.7402,-118.195 0/0:59:55,4:55:1874:4:138:0,-5.00032,-156.179 0/0:77:77,0:77:2625:0:0:0,-23.1793,-236.509 0/0:55:55,0:55:1882:0:0:0,-16.5566,-169.662 dDocent_Contig_6517 1 . N G 147.832 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=7.37776;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=160;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:160:-14.7829,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6518 31 . C T 144.418 . AB=0.12;ABP=191.147;AC=3;AF=0.25;AN=12;AO=21;CIGAR=1X;DP=376;DPB=376;DPRA=0.728395;EPP=48.6112;EPPR=773.883;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.985915;PAO=0;PQA=0;PQR=0;PRO=0;QA=814;QR=13983;RO=355;RPL=0;RPP=48.6112;RPPR=773.883;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=355;SRP=773.883;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:43:39,4:39:1539:4:153:-1.19591,0,-125.81 0/0:79:78,1:78:3039:1:40:0,-19.7857,-269.615 0/1:34:29,5:29:1144:5:190:-7.22716,0,-93.009 0/1:73:64,9:64:2500:9:356:-10.4253,0,-203.182 0/0:81:81,0:81:3201:0:0:0,-24.3834,-288.162 0/0:66:64,2:64:2560:2:75:0,-12.7492,-223.419 dDocent_Contig_6519 98 . N T 237.563 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=236;QR=0;RO=0;RPL=8;RPP=20.3821;RPPR=0;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 1/1:1:0,1:0:0:1:25:-2.49986,-0.30103,0 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 1/1:2:0,2:0:0:2:57:-5.41432,-0.60206,0 1/1:2:0,2:0:0:2:67:-6.36284,-0.60206,0 1/1:1:0,1:0:0:1:26:-2.59983,-0.30103,0 dDocent_Contig_6520 25 . T C 4972.39 . AB=0.338739;ABP=128.373;AC=5;AF=0.416667;AN=12;AO=188;CIGAR=1X;DP=662;DPB=662;DPRA=1.03738;EPP=411.247;EPPR=1032.29;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7470;QR=18791;RO=474;RPL=0;RPP=411.247;RPPR=1032.29;RPR=188;RUN=1;SAF=188;SAP=411.247;SAR=0;SRF=474;SRP=1032.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:15:13,2:13:518:2:82:-3.26423,0,-42.4506 0/1:128:86,42:86:3411:42:1669:-111.91,0,-268.516 0/1:67:43,24:43:1711:24:925:-63.3787,0,-134.042 0/1:155:82,73:82:3263:73:2910:-215.332,0,-247.07 0/0:107:107,0:107:4277:0:0:0,-32.2102,-384.885 0/1:190:143,47:143:5611:47:1884:-112.572,0,-447.644 dDocent_Contig_6521 20 . C G 133.794 . AB=0.13253;ABP=100.36;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=315;DPB=315;DPRA=0.944444;EPP=29.068;EPPR=660.966;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8284;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993399;PAO=0;PQA=0;PQR=0;PRO=0;QA=483;QR=12168;RO=303;RPL=0;RPP=29.068;RPPR=660.966;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=303;SRP=660.966;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1418:0:0:0,-10.536,-127.868 0/0:70:69,1:69:2788:1:40:0,-17.0764,-247.022 0/1:35:32,3:32:1267:3:121:-0.744147,0,-103.75 0/0:73:73,0:73:2928:0:0:0,-21.9752,-263.598 0/0:54:54,0:54:2157:0:0:0,-16.2556,-192.911 0/1:48:40,8:40:1610:8:322:-14.8983,0,-130.678 dDocent_Contig_6522 23 . T C 1783.56 . AB=0.149425;ABP=467.381;AC=4;AF=0.333333;AN=12;AO=73;CIGAR=1X3M;DP=654;DPB=726.5;DPRA=0;EPP=161.528;EPPR=1099.6;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2904;QR=20110;RO=505;RPL=0;RPP=161.528;RPPR=1099.6;RPR=73;RUN=1;SAF=73;SAP=161.528;SAR=0;SRF=505;SRP=1099.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:88:75,7,6,0:75:2961:7,6,0:259,244,0:0,-1.40905,-242.921,-2.43397,-224.901,-244.281,-22.5772,-245.028,-246.087,-266.214 0|1:107:79,17,10,0:79:3164:17,10,0:657,388,0:-30.1971,0,-255.572,-22.0974,-228.816,-279.767,-53.9785,-260.69,-282.778,-314.652 0|1:98:66,18,8,6:66:2615:18,8,6:688,303,225:-36.5875,0,-209.822,-31.6208,-190.407,-244.449,-38.0332,-196.818,-228.435,-251.463 0|1:105:73,15,11,6:73:2886:15,11,6:576,446,246:-25.2968,0,-232.964,-10.4878,-200.699,-244.668,-26.9643,-217.174,-227.674,-262.649 0|1:125:84,0,36,0:84:3371:0,36,0:0,1442,0:-93.4966,-118.783,-396.54,0,-277.749,-266.912,-118.783,-396.54,-277.749,-396.54 0|0:131:128,1,2,0:128:5113:1,2,0:37,81,0:0,-35.5164,-456.336,-31.8295,-449.958,-452.383,-38.5318,-456.637,-452.985,-459.664 dDocent_Contig_6523 1 . N G 120.83 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=122;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 dDocent_Contig_6524 9 . G A 33024.2 . AB=0.505898;ABP=3.70187;AC=6;AF=0.5;AN=12;AO=1158;CIGAR=1X4M;DP=2289;DPB=2288.2;DPRA=0;EPP=2517.58;EPPR=2020.31;GTI=0;LEN=1;MEANALT=7.33333;MQM=59.9603;MQMR=59.9925;NS=6;NUMALT=2;ODDS=0;PAIRED=0.945596;PAIREDR=0.911733;PAO=0;PQA=0;PQR=0;PRO=0;QA=43833;QR=35584;RO=929;RPL=0;RPP=2517.58;RPPR=2020.31;RPR=1158;RUN=1;SAF=1158;SAP=2517.58;SAR=0;SRF=929;SRP=2020.31;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:357:117,19,202:117:4423:19,202:743,7644:-591.396,-565.528,-922.345,0,-301.452,-301.733 0|1:530:223,6,279:223:8520:6,279:214,10515:-794.508,-844.2,-1541.44,0,-681.606,-615.055 0|1:232:74,23,125:74:2837:23,125:892,4755:-367.706,-316.699,-542.617,0,-159.555,-195.209 0|1:420:189,22,187:189:7287:22,187:869,7088:-524.208,-509.593,-1101.34,0,-526.853,-542.07 0|1:343:139,12,177:139:5365:12,177:471,6747:-511.623,-514.729,-951.704,0,-401.848,-387.304 0|1:407:187,6,188:187:7152:6,188:239,7084:-524.197,-560.808,-1145.86,0,-567.174,-530.262 dDocent_Contig_6525 28 . C G 295.514 . AB=0.109467;ABP=450.77;AC=1;AF=0.0833333;AN=12;AO=48;CIGAR=1X;DP=1581;DPB=1581;DPRA=1.32159;EPP=107.241;EPPR=3327.53;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.991509;PAO=0;PQA=0;PQR=0;PRO=0;QA=1877;QR=60727;RO=1531;RPL=0;RPP=107.241;RPPR=3327.53;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=1531;SRP=3327.53;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:241:240,0:240:9478:0:0:0,-72.2472,-852.084 0/0:286:286,0:286:11330:0:0:0,-86.0946,-1018.98 0/0:154:154,0:154:6135:0:0:0,-46.3586,-551.936 0/0:256:255,1:255:10070:1:10:0,-76.0637,-904.718 0/0:306:295,10:295:11759:10:394:0,-56.3684,-1021.72 0/1:338:301,37:301:11955:37:1473:-31.0743,0,-973.408 dDocent_Contig_6526 16 . T C 6324.38 . AB=0.203472;ABP=1102.79;AC=4;AF=0.333333;AN=12;AO=334;CIGAR=2X3M;DP=2048;DPB=2048;DPRA=0;EPP=728.282;EPPR=3514.28;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.999382;PAO=0;PQA=0;PQR=0;PRO=0;QA=13229;QR=64149;RO=1617;RPL=0;RPP=728.282;RPPR=3514.28;RPR=334;RUN=1;SAF=334;SAP=728.282;SAR=0;SRF=1617;SRP=3514.28;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:264:247,0,17:247:9823:0,17:0,679:0,-74.3544,-883.11,-18.0322,-827.186,-822.069 0|1:359:312,0,45:312:12362:0,45:0,1791:-53.5341,-147.455,-1164.92,0,-1017.45,-1003.91 0|0:344:319,0,24:319:12690:0,24:0,939:0,-96.0286,-1140.86,-18.5587,-1063.66,-1056.43 0|1:328:276,0,52:276:10994:0,52:0,2039:-84.9693,-168.054,-1073.35,0,-905.692,-890.039 0|1:375:270,36,67:270:10682:36,67:1410,2681:-139.576,-104.927,-973.161,0,-763.149,-858.909 0|1:378:193,55,129:193:7598:55,129:2183,5100:-361.58,-239.976,-848.417,0,-445.293,-586.163 dDocent_Contig_6527 98 . N C 292.59 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=10;CIGAR=1X;DP=10;DPB=10;DPRA=0;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=298;QR=0;RO=0;RPL=10;RPP=24.725;RPPR=0;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:3:0,3:0:0:3:105:-9.79616,-0.90309,0 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:3:0,3:0:0:3:104:-9.70309,-0.90309,0 1/1:1:0,1:0:0:1:12:-1.19999,-0.30103,0 dDocent_Contig_6528 98 . N T 188.087 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=194;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:142:-13.1293,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:20:-1.99996,-0.30103,0 dDocent_Contig_6529 61 . T C 55.6645 . AB=0.214286;ABP=12.937;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=127;DPB=127;DPRA=0.91954;EPP=11.6962;EPPR=270.101;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.96748;PAO=0;PQA=0;PQR=0;PRO=0;QA=159;QR=4902;RO=123;RPL=4;RPP=11.6962;RPPR=270.101;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=123;SRP=270.101;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:14:11,3:11:441:3:118:-6.7883,0,-35.831 0/0:13:13,0:13:522:0:0:0,-3.91339,-47.3269 0/0:24:24,0:24:963:0:0:0,-7.22472,-86.9695 0/0:22:22,0:22:892:0:0:0,-6.62266,-80.5863 0/0:28:28,0:28:1118:0:0:0,-8.42884,-100.901 0/0:26:25,1:25:966:1:41:0,-3.73221,-83.1312 dDocent_Contig_6530 105 . N A 739.844 . AB=0.333333;ABP=5.9056;AC=10;AF=1;AN=10;AO=4;CIGAR=3X;DP=26;DPB=26;DPRA=3.42857;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=0;NS=5;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=136;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:6:0,6,0:0:0:6,0:208,0:-19.0596,-1.80618,0,-19.0596,-1.80618,-19.0596 .:.:.:.:.:.:.:. 1|1:1:0,0,0:0:0:0,0:0,0:0,0,0,0,0,0 1|1:12:0,8,4:0:0:8,4:275,136:-33.7072,-11.3719,-8.96361,-22.6765,0,-21.4724 1|1:4:0,4,0:0:0:4,0:138,0:-12.7604,-1.20412,0,-12.7604,-1.20412,-12.7604 1|1:3:0,3,0:0:0:3,0:103,0:-9.60997,-0.90309,0,-9.60997,-0.90309,-9.60997 dDocent_Contig_6531 20 . C A 135470 . AB=0.796865;ABP=2297.9;AC=8;AF=0.666667;AN=12;AO=4083;CIGAR=1X;DP=4753;DPB=4753;DPRA=0;EPP=8869.13;EPPR=1451.38;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999755;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=163222;QR=26647;RO=667;RPL=0;RPP=8869.13;RPPR=1451.38;RPR=4083;RUN=1;SAF=4083;SAP=8869.13;SAR=0;SRF=667;SRP=1451.38;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:646:160,486:160:6367:486:19420:-1551.69,0,-378.302 0/1:867:189,678:189:7546:678:27093:-2174.93,0,-417.734 0/1:611:92,518:92:3667:518:20747:-1681.39,0,-146.022 0/1:874:166,707:166:6648:707:28278:-2279.22,0,-334.798 1/1:828:36,792:36:1444:792:31568:-2708,-119.042,0 1/1:927:24,902:24:975:902:36116:-3158.98,-191.116,0 dDocent_Contig_6533 107 . N A 70.1665 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=70;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:25:-2.37497,-0.60206,0 1/1:2:0,1:0:0:1:7:-0.629998,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,2:0:0:2:38:-3.49993,-0.60206,0 dDocent_Contig_6534 24 . T A 194.454 . AB=0.117318;ABP=230.699;AC=2;AF=0.166667;AN=12;AO=32;CIGAR=1X;DP=756;DPB=756;DPRA=0.781356;EPP=72.4974;EPPR=1575.16;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.96547;PAO=0;PQA=0;PQR=0;PRO=0;QA=1282;QR=28852;RO=724;RPL=0;RPP=72.4974;RPPR=1575.16;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=724;SRP=1575.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:103:94,9:94:3722:9:358:-1.57483,0,-303.982 0/0:117:117,0:117:4683:0:0:0,-35.2205,-421.372 0/1:76:64,12:64:2550:12:483:-20.9419,0,-206.746 0/0:142:136,6:136:5445:6:239:0,-20.8623,-467.987 0/0:178:178,0:178:7078:0:0:0,-53.5833,-636.68 0/0:140:135,5:135:5374:5:202:0,-23.5821,-464.933 dDocent_Contig_6535 98 . N C 480.28 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=16;CIGAR=1X;DP=16;DPB=16;DPRA=0;EPP=37.7539;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=509;QR=0;RO=0;RPL=16;RPP=37.7539;RPPR=0;RPR=0;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:27:-2.69978,-0.30103,0 1/1:2:0,2:0:0:2:50:-4.74916,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:4:0,4:0:0:4:135:-12.4835,-1.20412,0 1/1:7:0,7:0:0:7:227:-20.7481,-2.10721,0 dDocent_Contig_6536 38 . C A 46.2551 . AB=0.0973451;ABP=162.143;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=934;DPB=934;DPRA=1.05727;EPP=39.9253;EPPR=1994.25;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.946565;PAO=0;PQA=0;PQR=0;PRO=0;QA=684;QR=36630;RO=917;RPL=0;RPP=39.9253;RPPR=1994.25;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=917;SRP=1994.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:113:102,11:102:4054:11:439:-5.84735,0,-330.815 0/0:176:174,2:174:6947:2:82:0,-45.2016,-617.136 0/0:80:80,0:80:3208:0:0:0,-24.0824,-288.788 0/0:191:187,4:187:7464:4:163:0,-42.4383,-656.328 0/0:210:210,0:210:8440:0:0:0,-63.2163,-759.093 0/0:164:164,0:164:6517:0:0:0,-49.3689,-586.248 dDocent_Contig_6537 174 . C T 64.5271 . AB=0.112676;ABP=95.5273;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=463;DPB=463;DPRA=1.28369;EPP=26.8965;EPPR=984.516;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.818182;PAIREDR=0.803097;PAO=0;PQA=0;PQR=0;PRO=0;QA=442;QR=17991;RO=452;RPL=11;RPP=26.8965;RPPR=984.516;RPR=0;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=984.516;SRR=452;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:65:65,0:65:2582:0:0:0,-19.5669,-232.52 0/0:110:107,3:107:4283:3:120:0,-21.9254,-374.24 0/0:64:64,0:64:2547:0:0:0,-19.2659,-229.369 0/0:100:100,0:100:3961:0:0:0,-30.103,-356.498 0/0:53:53,0:53:2105:0:0:0,-15.9546,-189.633 0/1:71:63,8:63:2513:8:322:-7.97559,0,-204.939 dDocent_Contig_6538 8 . A G 314.519 . AB=0.0956007;ABP=1682.02;AC=1;AF=0.0833333;AN=12;AO=190;CIGAR=1X;DP=5899;DPB=5899;DPRA=0;EPP=415.59;EPPR=12391.3;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7234;QR=216967;RO=5705;RPL=0;RPP=415.59;RPPR=12391.3;RPR=190;RUN=1;SAF=190;SAP=415.59;SAR=0;SRF=5705;SRP=12391.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:786:774,12:774:29426:12:449:0,-195.856,-2605.89 0/0:1079:1077,1:1077:40902:1:23:0,-322.515,-3676.31 0/0:710:709,1:709:26907:1:39:0,-209.835,-2416.23 0/0:987:985,1:985:37540:1:38:0,-293.258,-3372.66 0/1:1182:1068,113:1068:40636:113:4320:-32.9748,0,-3298.85 0/0:1155:1092,62:1092:41556:62:2365:0,-134.436,-3524.41 dDocent_Contig_6539 13 . G A 5550.93 . AB=0.502632;ABP=3.03316;AC=6;AF=0.5;AN=12;AO=191;CIGAR=1X;DP=380;DPB=380;DPRA=0;EPP=417.762;EPPR=413.419;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.973822;PAIREDR=0.931217;PAO=0;PQA=0;PQR=0;PRO=0;QA=7545;QR=7391;RO=189;RPL=0;RPP=417.762;RPPR=413.419;RPR=191;RUN=1;SAF=191;SAP=417.762;SAR=0;SRF=189;SRP=413.419;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:51:28,23:28:1109:23:903:-66.2284,0,-84.7484 0/1:91:53,38:53:2066:38:1514:-109.115,0,-158.755 0/1:61:31,30:31:1183:30:1180:-88.1183,0,-88.3815 0/1:86:56,30:56:2200:30:1195:-81.9431,0,-172.306 0/1:45:10,35:10:397:35:1371:-110.116,0,-22.5423 0/1:46:11,35:11:436:35:1382:-110.794,0,-25.748 dDocent_Contig_6540 7 . A G 69892.7 . AB=0.781283;ABP=2595.24;AC=6;AF=0.5;AN=12;AO=2947;CIGAR=1X;DP=3772;DPB=3772;DPRA=0;EPP=6402.34;EPPR=1444.87;GTI=0;LEN=1;MEANALT=2.83333;MQM=53.6576;MQMR=59.4804;NS=6;NUMALT=1;ODDS=0;PAIRED=0.695962;PAIREDR=0.832831;PAO=0;PQA=0;PQR=0;PRO=0;QA=94181;QR=25264;RO=664;RPL=0;RPP=6402.34;RPPR=1444.87;RPR=2947;RUN=1;SAF=2947;SAP=6402.34;SAR=0;SRF=664;SRP=1444.87;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:644:100,506:100:3809:506:16167:-1187.32,0,-160.223 0/1:879:121,722:121:4616:722:23001:-1720.15,0,-161.482 0/1:528:81,421:81:3057:421:13511:-1012.93,0,-123.865 0/1:727:148,552:148:5606:552:17766:-1320.79,0,-287.475 0/1:518:129,375:129:4922:375:11675:-852.019,0,-289.501 0/1:476:85,371:85:3254:371:12061:-907.289,0,-154.809 dDocent_Contig_6541 61 . G A 3939.7 . AB=0.240761;ABP=524.283;AC=6;AF=0.5;AN=12;AO=215;CIGAR=1X;DP=893;DPB=893;DPRA=0;EPP=469.877;EPPR=1475.27;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998525;PAO=0;PQA=0;PQR=0;PRO=0;QA=7469;QR=23699;RO=678;RPL=215;RPP=469.877;RPPR=1475.27;RPR=0;RUN=1;SAF=215;SAP=469.877;SAR=0;SRF=678;SRP=1475.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:106:70,36:70:2361:36:1201:-76.4761,0,-180.841 0/1:221:159,62:159:5347:62:2100:-122.745,0,-414.869 0/1:152:124,28:124:4364:28:991:-43.7436,0,-347.157 0/1:212:158,54:158:5700:54:1925:-109.697,0,-449.263 0/1:61:41,20:41:1466:20:717:-46.4929,0,-113.868 0/1:141:126,15:126:4461:15:535:-6.0378,0,-359.187 dDocent_Contig_6542 22 . G A 8957.37 . AB=0.520799;ABP=5.26849;AC=6;AF=0.5;AN=12;AO=313;CIGAR=1M1X2M1X5M3X;DP=601;DPB=598.077;DPRA=0;EPP=674.023;EPPR=413.419;GTI=0;LEN=1;MEANALT=5.33333;MQM=53.2907;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0;PAIREDR=0.984127;PAO=0;PQA=0;PQR=0;PRO=0;QA=11835;QR=7382;RO=189;RPL=0;RPP=682.681;RPPR=413.419;RPR=313;RUN=1;SAF=312;SAP=674.023;SAR=1;SRF=189;SRP=413.419;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:70:20,2,6,40,0:20:779:2,6,40,0:75,234,1492,0:-115.413,-115.488,-178.912,-104.108,-162.188,-166.328,0,-58.1106,-46.7325,-52.0148,-121.434,-179.514,-168.134,-64.056,-185.46 0|1:91:10,3,9,67,1:10:392:3,9,67,1:102,340,2533,39:-203.68,-199.228,-230.562,-181.974,-206.749,-211.502,0,-24.7993,-7.55019,-12.0873,-203.484,-228.259,-211.005,-29.0492,-235.42 0|1:82:31,3,2,44,0:31:1196:3,2,44,0:112,77,1657,0:-125.649,-126.109,-223.42,-129.243,-218.586,-226.856,0,-89.3859,-92.5205,-85.0126,-134.981,-224.324,-227.458,-98.2579,-233.196 0|1:109:31,8,11,56,0:31:1198:8,11,56,0:270,414,2117,0:-162.915,-151.92,-247.907,-141.543,-219.613,-236.628,0,-78.0977,-67.7195,-81.563,-172.246,-250.316,-239.939,-98.4207,-270.643 0|1:110:46,8,3,46,3:46:1816:8,3,46,3:305,116,1778,116:-130.864,-120.177,-267.2,-135.481,-260.378,-284.008,0,-124.903,-140.205,-135.587,-135.183,-260.08,-275.383,-139.907,-283.711 0|1:139:51,12,2,60,12:51:2001:12,2,60,12:386,76,2258,463:-168.439,-154.21,-315.167,-178.095,-313.084,-342.065,0,-135.013,-158.896,-146.529,-145.767,-280.758,-304.646,-126.569,-306.729 dDocent_Contig_6543 18 . G A 125915 . AB=0.694331;ABP=1524.68;AC=7;AF=0.583333;AN=12;AO=3989;CIGAR=1X;DP=5472;DPB=5472;DPRA=0;EPP=8665.01;EPPR=3216.79;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997994;PAIREDR=0.998649;PAO=0;PQA=0;PQR=0;PRO=0;QA=158157;QR=58784;RO=1480;RPL=0;RPP=8665.01;RPPR=3216.79;RPR=3989;RUN=1;SAF=3989;SAP=8665.01;SAR=0;SRF=1480;SRP=3216.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:833:63,768:63:2483:768:30340:-2504.39,-26.8962,0 0/1:905:164,741:164:6528:741:29495:-2379.51,0,-314.819 0/1:459:39,420:39:1553:420:16602:-1354.75,0,-1.83208 0/1:968:104,864:104:4154:864:34240:-2787.19,0,-82.433 0/1:1111:489,621:489:19407:621:24657:-1882.5,0,-1410.51 0/1:1196:621,575:621:24659:575:22823:-1692.12,0,-1857.16 dDocent_Contig_6544 16 . A T 293.146 . AB=0.172043;ABP=89.8925;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1X;DP=328;DPB=328;DPRA=1.5847;EPP=44.2683;EPPR=673.995;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996764;PAO=0;PQA=0;PQR=0;PRO=0;QA=772;QR=12252;RO=309;RPL=0;RPP=44.2683;RPPR=673.995;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=309;SRP=673.995;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:56:56,0:56:2206:0:0:0,-16.8577,-198.725 0/0:52:49,3:49:1921:3:122:0,-4.28107,-161.719 0/0:37:37,0:37:1474:0:0:0,-11.1381,-132.91 0/1:93:77,16:77:3068:16:650:-30.8375,0,-248.213 0/0:24:24,0:24:953:0:0:0,-7.22472,-86.0716 0/0:66:66,0:66:2630:0:0:0,-19.868,-236.835 dDocent_Contig_6545 7 . A T 10704.4 . AB=0.0363636;ABP=1851.45;AC=0;AF=0;AN=12;AO=36;CIGAR=1X3M1X5M1X12M;DP=1218;DPB=1220.04;DPRA=0;EPP=81.1833;EPPR=265.758;GTI=0;LEN=1;MEANALT=19;MQM=60;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1362;QR=4676;RO=121;RPL=0;RPP=81.1833;RPPR=265.758;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=121;SRP=265.758;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:170:14,8,6,8,33,6,4,24,42,7:14:537:8,6,8,33,6,4,24,42,7:285,233,313,1288,220,155,900,1600,269:-188.825,-184.598,-226.265,-173.893,-209.527,-216.162,-167.804,-203.438,-192.733,-209.472,-87.1559,-122.793,-112.086,-105.997,-121.299,-175.058,-210.692,-199.987,-193.898,-113.251,-217.328,-180.305,-215.939,-205.234,-199.145,-118.498,-206.399,-223.177,-119.335,-154.971,-144.264,-138.176,-57.5271,-145.43,-150.677,-156.186,-61.8096,-97.4478,-86.7393,-80.6505,0,-87.9048,-93.1516,-32.1809,-93.2431,-170.959,-206.593,-195.888,-189.799,-109.151,-197.053,-202.3,-141.33,-83.8051,-212.927 0|0:227:17,15,8,7,36,9,15,44,40,16:17:660:15,8,7,36,9,15,44,40,16:575,304,266,1388,339,564,1709,1573,580:-210.4,-185.837,-235.551,-190.587,-215.136,-242.409,-193.834,-218.383,-223.134,-245.958,-101.544,-126.095,-130.844,-134.091,-144.938,-187.738,-212.287,-217.038,-220.285,-127.995,-239.26,-169.317,-193.867,-198.617,-201.864,-109.574,-195.768,-219.033,-75.0956,-99.647,-104.396,-107.643,-15.3517,-101.547,-83.1259,-116.082,-86.1927,-110.744,-115.493,-118.74,-26.4487,-112.644,-94.2229,0,-128.383,-168.178,-192.727,-197.477,-200.725,-108.435,-194.629,-176.208,-81.9865,-93.0835,-217.592 0|0:136:16,13,7,14,17,4,0,10,35,10:16:628:13,7,14,17,4,0,10,35,10:505,267,546,675,148,0,399,1378,368:-112.083,-95.5453,-143.284,-94.9938,-125.293,-144.541,-72.3524,-102.653,-102.102,-119.792,-61.3244,-91.6256,-91.074,-68.4325,-107.862,-104.791,-135.09,-134.54,-111.899,-100.871,-155.241,-116.899,-147.197,-146.648,-124.007,-112.979,-156.445,-168.553,-84.0349,-114.335,-113.784,-91.1429,-80.115,-123.581,-135.689,-132.679,-3.92028,-34.2263,-33.671,-11.0288,0,-43.4685,-55.5768,-22.7115,-45.0407,-86.8184,-117.118,-116.567,-93.9263,-82.8985,-126.364,-138.472,-105.609,-25.4956,-135.462 0|0:264:23,19,12,14,26,7,8,40,63,11:23:893:19,12,14,26,7,8,40,63,11:696,444,523,1016,266,296,1508,2458,407:-244.871,-227.533,-295.188,-215.474,-264.589,-285.238,-209.128,-258.243,-246.185,-278.29,-168.265,-217.381,-205.322,-198.976,-233.815,-229.978,-279.092,-267.035,-260.689,-219.826,-301.247,-227.583,-276.697,-264.639,-258.293,-217.431,-279.143,-298.551,-128.237,-177.354,-165.293,-158.947,-118.084,-179.797,-177.402,-189.572,-50.182,-99.3018,-87.2395,-80.8934,-40.0292,-101.744,-99.3484,0,-104.595,-218.502,-267.617,-255.559,-249.213,-208.35,-270.063,-267.667,-168.321,-90.2677,-288.567 0|0:193:30,4,3,7,33,19,0,21,38,2:30:1150:4,3,7,33,19,0,21,38,2:160,114,274,1297,712,0,807,1468,78:-123.75,-127.618,-220.797,-123.431,-212.652,-216.912,-110.801,-200.022,-195.835,-203.077,-26.0963,-115.319,-111.132,-98.5012,-110.547,-74.4641,-163.685,-159.499,-146.868,-62.1644,-163.128,-132.781,-222.001,-217.815,-205.185,-120.481,-168.848,-227.164,-66.5354,-155.757,-151.57,-138.94,-54.2356,-102.603,-160.919,-154.598,-12.3002,-101.523,-97.3355,-84.705,0,-48.3682,-106.685,-40.4394,-95.2456,-126.369,-215.589,-211.403,-198.773,-114.069,-162.436,-220.753,-154.508,-100.273,-220.15 0|0:228:21,27,0,7,47,17,2,17,39,1:21:808:27,0,7,47,17,2,17,39,1:1056,0,273,1839,630,82,649,1504,38:-201.736,-171.591,-229.797,-208.058,-237.925,-274.394,-185.98,-215.848,-252.317,-250.21,-56.853,-86.7277,-123.192,-101.114,-109.043,-156.513,-186.382,-222.849,-200.772,-71.6454,-217.732,-201.289,-231.156,-267.626,-245.548,-116.423,-216.081,-267.024,-154.815,-184.685,-221.152,-199.075,-69.9479,-169.607,-214.384,-216.035,-84.8693,-114.742,-151.207,-129.13,0,-99.6616,-144.438,-97.9641,-139.467,-204.941,-234.808,-271.278,-249.2,-120.075,-219.733,-264.509,-218.036,-148.091,-270.977 dDocent_Contig_6546 107 . N A 54.5588 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=51;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:41:-3.89418,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:5:-0.499999,-0.30103,0 1/1:1:0,1:0:0:1:5:-0.499999,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_6547 8 . A C 1764.83 . AB=0.120229;ABP=1972.3;AC=3;AF=0.25;AN=12;AO=214;CIGAR=1X;DP=3560;DPB=3560;DPRA=0.620907;EPP=467.705;EPPR=7251.39;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8226;QR=127404;RO=3338;RPL=0;RPP=467.705;RPPR=7251.39;RPR=214;RUN=1;SAF=214;SAP=467.705;SAR=0;SRF=3338;SRP=7251.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:430:352,77:352:13398:77:2930:-134.343,0,-1075.72 0/1:555:493,61:493:18804:61:2359:-45.3593,0,-1524.25 0/0:400:374,25:374:14328:25:974:0,-32.2591,-1200.91 0/1:587:534,51:534:20394:51:1963:-0.417874,0,-1657.9 0/0:687:685,0:685:26093:0:0:0,-206.206,-2346.68 0/0:901:900,0:900:34387:0:0:0,-270.927,-3092.37 dDocent_Contig_6548 39 . G A 1413.21 . AB=0.126016;ABP=1198.41;AC=2;AF=0.166667;AN=12;AO=211;CIGAR=1X1M1X;DP=4696;DPB=4696;DPRA=0.641468;EPP=461.191;EPPR=9705.15;GTI=0;LEN=1;MEANALT=3.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998881;PAO=0;PQA=0;PQR=0;PRO=0;QA=8350;QR=175370;RO=4468;RPL=0;RPP=461.191;RPPR=9705.15;RPR=211;RUN=1;SAF=211;SAP=461.191;SAR=0;SRF=4468;SRP=9705.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:621:546,74:546:21349:74:2929:-76.6809,0,-1732.84 0|0:801:744,55:744:29259:55:2179:0,-44.5621,-2434.7 0|1:363:312,50:312:12321:50:1967:-67.8621,0,-998.742 0|0:854:815,32:815:32013:32:1275:0,-140.21,-2763.63 0|0:956:953,0:953:37413:0:0:0,-286.882,-3363.82 0|0:1101:1098,0:1098:43015:0:0:0,-330.531,-3867.6 dDocent_Contig_6549 10 . G A 11294.6 . AB=0.842353;ABP=435.675;AC=4;AF=0.333333;AN=12;AO=358;CIGAR=1X;DP=534;DPB=534;DPRA=1.94954;EPP=780.397;EPPR=385.189;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=14049;QR=6970;RO=176;RPL=0;RPP=780.397;RPPR=385.189;RPR=358;RUN=1;SAF=358;SAP=780.397;SAR=0;SRF=176;SRP=385.189;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:110:16,94:16:640:94:3659:-296.239,0,-24.8198 0/1:190:22,168:22:880:168:6632:-539.432,0,-22.313 0/1:57:9,48:9:349:48:1893:-153.412,0,-14.6048 0/1:68:20,48:20:756:48:1865:-147.599,0,-47.8775 0/0:62:62,0:62:2461:0:0:0,-18.6639,-221.64 0/0:47:47,0:47:1884:0:0:0,-14.1484,-169.763 dDocent_Contig_6550 8 . A G 1995.89 . AB=0.189597;ABP=501.793;AC=5;AF=0.416667;AN=12;AO=116;CIGAR=1X3M;DP=644;DPB=644;DPRA=0;EPP=254.901;EPPR=1123.49;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4391;QR=19975;RO=516;RPL=0;RPP=254.901;RPPR=1123.49;RPR=116;RUN=1;SAF=116;SAP=254.901;SAR=0;SRF=516;SRP=1123.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:90:70,5,15:70:2694:5,15:188,568:-25.4962,-31.1656,-250.848,0,-205.788,-216.675 0|1:110:86,3,21:86:3343:3,21:116,786:-38.4636,-54.8224,-328.639,0,-265.181,-268.388 0|0:48:44,1,3:44:1711:1,3:37,115:0,-10.2216,-150.533,-3.79648,-141.395,-143.519 0|1:112:90,1,21:90:3488:1,21:37,800:-38.5382,-62.6044,-348.855,0,-283.536,-280.242 0|1:161:144,0,17:144:5578:0,17:0,652:-10.5501,-53.8984,-512.12,0,-458.605,-453.488 0|1:123:82,0,39:82:3161:0,39:0,1470:-95.7624,-120.447,-380.011,0,-259.56,-247.819 dDocent_Contig_6551 98 . N T 389.172 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=12;CIGAR=1X;DP=12;DPB=12;DPRA=0;EPP=29.068;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=406;QR=0;RO=0;RPL=12;RPP=29.068;RPPR=0;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:3:0,3:0:0:3:100:-9.33053,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:104:-9.70309,-0.90309,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:2:0,2:0:0:2:62:-5.88896,-0.60206,0 dDocent_Contig_6552 11 . C A 10027.3 . AB=0.0355556;ABP=846.14;AC=0;AF=0;AN=12;AO=16;CIGAR=2X;DP=520;DPB=520;DPRA=0;EPP=37.7539;EPPR=285.302;GTI=0;LEN=1;MEANALT=2.8;MQM=53.375;MQMR=55.5154;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.984615;PAO=0;PQA=0;PQR=0;PRO=0;QA=355;QR=5052;RO=130;RPL=0;RPP=37.7539;RPPR=285.302;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=130;SRP=285.302;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:70:30,0,39:30:1196:0,39:0,1435:-103.091,-112.122,-210.288,0,-98.3168,-86.5767 0|0:79:27,2,50:27:1047:2,50:42,1770:-136.131,-141.087,-224.847,0,-81.346,-69.4603 0|0:34:10,3,21:10:388:3,21:60,769:-59.9637,-58.4984,-89.2539,0,-27.3412,-25.4731 0|0:109:26,4,74:26:1010:4,74:82,2737:-209.992,-211.651,-292.285,0,-75.7363,-59.6146 0|0:96:13,3,78:13:499:3,78:66,2822:-219.617,-218.499,-258.494,0,-35.9568,-17.4854 0|0:132:24,4,101:24:912:4,101:105,3678:-285.156,-284.142,-357.165,0,-66.0636,-43.8875 dDocent_Contig_6553 79 . A G 650.457 . AB=0.02;ABP=603.379;AC=0;AF=0;AN=12;AO=56;CIGAR=4X2M1X;DP=793;DPB=792.714;DPRA=0;EPP=124.613;EPPR=1429.67;GTI=0;LEN=1;MEANALT=2.66667;MQM=14.7857;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.987823;PAO=0;PQA=0;PQR=0;PRO=0;QA=1988;QR=22775;RO=657;RPL=56;RPP=124.613;RPPR=1429.67;RPR=0;RUN=1;SAF=0;SAP=124.613;SAR=56;SRF=657;SRP=1429.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:129:112,9,8:112:3833:9,8:315,280:0,-24.9622,-333.378,-10.8367,-313.306,-319.745 0|0:184:139,3,35:139:4748:3,35:106,1232:-58.5079,-97.7671,-482.182,0,-382.786,-374.844 0|0:116:96,3,13:96:3369:3,13:106,472:-9.75968,-35.5489,-308.847,0,-271.205,-270.422 0|0:146:127,8,11:127:4412:8,11:282,395:0,-29.9566,-386.226,-5.88865,-356.412,-361.452 0|0:84:74,10,0:74:2599:10,0:357,0:0,-11.6691,-220.544,-22.2762,-223.554,-233.987 0|0:134:109,23,0:109:3814:23,0:822,0:0,-8.80576,-312.332,-32.8123,-319.256,-343.275 dDocent_Contig_6554 9 . G A 528.651 . AB=0.152672;ABP=277.544;AC=5;AF=0.416667;AN=12;AO=43;CIGAR=1X;DP=307;DPB=307;DPRA=0;EPP=96.3836;EPPR=576.279;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.465116;PAIREDR=0.617424;PAO=0;PQA=0;PQR=0;PRO=0;QA=1641;QR=9982;RO=264;RPL=0;RPP=96.3836;RPPR=576.279;RPR=43;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=264;SRP=576.279;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:38,4:38:1422:4:149:-1.12907,0,-115.615 0/1:70:55,15:55:2067:15:566:-30.204,0,-165.188 0/1:28:21,7:21:790:7:269:-16.1459,0,-62.9924 0/1:56:51,5:51:1938:5:193:-0.883681,0,-157.807 0/0:45:42,3:42:1611:3:117:0,-2.63597,-134.346 0/1:66:57,9:57:2154:9:347:-11.722,0,-174.226 dDocent_Contig_6555 27 . G T 707.525 . AB=0.171674;ABP=221.173;AC=3;AF=0.25;AN=12;AO=47;CIGAR=1X;DP=405;DPB=405;DPRA=1.45306;EPP=105.07;EPPR=780.397;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.957447;PAIREDR=0.874302;PAO=0;PQA=0;PQR=0;PRO=0;QA=1888;QR=14187;RO=358;RPL=0;RPP=105.07;RPPR=780.397;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=358;SRP=780.397;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:49:49,0:49:1952:0:0:0,-14.7505,-175.879 0/0:82:76,6:76:3002:6:235:0,-3.16809,-248.758 0/0:41:40,1:40:1568:1:41:0,-8.24766,-137.261 0/1:69:54,15:54:2146:15:609:-34.3765,0,-172.544 0/1:73:64,9:64:2531:9:362:-10.9688,0,-205.949 0/1:91:75,16:75:2988:16:641:-30.629,0,-241.613 dDocent_Contig_6556 7 . A C 12568.4 . AB=0.481681;ABP=5.71528;AC=6;AF=0.5;AN=12;AO=447;CIGAR=1X;DP=928;DPB=928;DPRA=0;EPP=973.658;EPPR=1043.15;GTI=0;LEN=1;MEANALT=1.33333;MQM=59.5817;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.604027;PAIREDR=0.997912;PAO=0;PQA=0;PQR=0;PRO=0;QA=17198;QR=18241;RO=479;RPL=0;RPP=973.658;RPPR=1043.15;RPR=447;RUN=1;SAF=447;SAP=973.658;SAR=0;SRF=479;SRP=1043.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:148:60,88:60:2272:88:3394:-261.02,0,-160.147 0/1:162:80,82:80:3042:82:3171:-236.712,0,-225.169 0/1:84:49,34:49:1856:34:1314:-93.0604,0,-141.972 0/1:341:235,105:235:8970:105:4036:-259.625,0,-704.324 0/1:91:35,56:35:1331:56:2158:-167.051,0,-92.6836 0/1:102:20,82:20:770:82:3125:-250.592,0,-38.9236 dDocent_Contig_6557 63 . T A 46.1594 . AB=0.214286;ABP=12.937;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=648;DPB=648;DPRA=0.892857;EPP=13.8677;EPPR=1399.27;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.99689;PAO=0;PQA=0;PQR=0;PRO=0;QA=177;QR=25318;RO=643;RPL=5;RPP=13.8677;RPPR=1399.27;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=643;SRP=1399.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:140:140,0:140:5538:0:0:0,-42.1442,-498.278 0/0:186:184,2:184:7254:2:66:0,-49.724,-646.258 0/0:129:129,0:129:5101:0:0:0,-38.8329,-458.974 0/0:162:162,0:162:6348:0:0:0,-48.7669,-571.106 0/0:17:17,0:17:650:0:0:0,-5.11751,-58.8248 0/1:14:11,3:11:427:3:111:-6.13881,0,-34.5596 dDocent_Contig_6558 19 . T G 83.4524 . AB=0.129032;ABP=77.1206;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=276;DPB=276;DPRA=1.24706;EPP=22.5536;EPPR=582.793;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992509;PAO=0;PQA=0;PQR=0;PRO=0;QA=354;QR=10584;RO=267;RPL=0;RPP=22.5536;RPPR=582.793;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=267;SRP=582.793;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:39,0:39:1539:0:0:0,-11.7402,-138.758 0/0:44:43,1:43:1729:1:41:0,-9.15075,-151.736 0/1:62:54,8:54:2117:8:313:-9.86812,0,-172.053 0/0:36:36,0:36:1449:0:0:0,-10.8371,-130.659 0/0:55:55,0:55:2188:0:0:0,-16.5566,-197.102 0/0:40:40,0:40:1562:0:0:0,-12.0412,-140.813 dDocent_Contig_6559 9 . G T 97.1968 . AB=0.110294;ABP=182.412;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=654;DPB=654;DPRA=1.23973;EPP=46.4397;EPPR=1379.72;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.25;PAIREDR=0.567823;PAO=0;PQA=0;PQR=0;PRO=0;QA=760;QR=24168;RO=634;RPL=0;RPP=46.4397;RPPR=1379.72;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=634;SRP=1379.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:99:99,0:99:3774:0:0:0,-29.802,-339.775 0/1:136:121,15:121:4615:15:576:-11.2426,0,-374.462 0/0:96:95,1:95:3641:1:39:0,-25.0023,-323.909 0/0:130:126,4:126:4795:4:145:0,-25.7296,-418.188 0/0:90:90,0:90:3398:0:0:0,-27.0927,-305.959 0/0:103:103,0:103:3945:0:0:0,-31.0061,-355.15 dDocent_Contig_6560 98 . N A 221.871 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=236;QR=0;RO=0;RPL=7;RPP=18.2106;RPPR=0;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:6:0,6:0:0:6:205:-18.7853,-1.80618,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 dDocent_Contig_6561 107 . N G 99.2515 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=97;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:30:-2.99957,-0.30103,0 1/1:1:0,1:0:0:1:8:-0.799998,-0.30103,0 1/1:3:0,3:0:0:3:59:-5.50537,-0.90309,0 ./.:.:.:.:.:.:.:. dDocent_Contig_6562 98 . N C 523.133 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=17;CIGAR=1X;DP=17;DPB=17;DPRA=0;EPP=39.9253;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=551;QR=0;RO=0;RPL=17;RPP=39.9253;RPPR=0;RPR=0;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 1/1:3:0,3:0:0:3:96:-8.95756,-0.90309,0 1/1:5:0,5:0:0:5:150:-13.7963,-1.50515,0 1/1:5:0,5:0:0:5:170:-15.6344,-1.50515,0 dDocent_Contig_6563 10 . G A 758.582 . AB=0.112346;ABP=1060.29;AC=2;AF=0.166667;AN=12;AO=133;CIGAR=1X;DP=3163;DPB=3163;DPRA=0.808931;EPP=291.816;EPPR=6580.4;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99967;PAO=0;PQA=0;PQR=0;PRO=0;QA=5213;QR=119415;RO=3029;RPL=0;RPP=291.816;RPPR=6580.4;RPR=133;RUN=1;SAF=133;SAP=291.816;SAR=0;SRF=3029;SRP=6580.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:467:443,24:443:17452:24:911:0,-58.2939,-1487.08 0/1:551:482,68:482:18907:68:2689:-76.2706,0,-1534.28 0/1:259:236,23:236:9364:23:894:-2.79813,0,-764.24 0/0:519:502,17:502:19690:17:678:0,-94.8828,-1709.19 0/0:627:627,0:627:24791:0:0:0,-188.746,-2229.11 0/0:740:739,1:739:29211:1:41:0,-218.668,-2622.35 dDocent_Contig_6564 98 . N C 1279.87 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=42;CIGAR=5X;DP=42;DPB=43.6;DPRA=0;EPP=94.2121;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=4;PQA=101;PQR=0;PRO=0;QA=1418;QR=0;RO=0;RPL=42;RPP=94.2121;RPPR=0;RPR=0;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:41:0,41:0:0:41:1384:-124.63,-12.3422,0 1|1:1:0,1:0:0:1:34:-3.05403,-0.30103,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_6565 25 . T A 1222.42 . AB=0.126214;ABP=1002.98;AC=2;AF=0.166667;AN=12;AO=116;CIGAR=1X;DP=2264;DPB=2264;DPRA=0.881962;EPP=254.901;EPPR=4662.99;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4628;QR=85497;RO=2146;RPL=0;RPP=254.901;RPPR=4662.99;RPR=116;RUN=1;SAF=116;SAP=254.901;SAR=0;SRF=2146;SRP=4662.99;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:349:293,56:293:11710:56:2243:-96.9795,0,-948.001 0/0:237:225,12:225:8973:12:482:0,-27.6163,-763.29 0/0:196:196,0:196:7858:0:0:0,-59.0019,-706.799 0/1:475:427,48:427:16908:48:1903:-28.4847,0,-1377.41 0/0:522:520,0:520:20722:0:0:0,-156.536,-1862.85 0/0:485:485,0:485:19326:0:0:0,-146,-1737.75 dDocent_Contig_6566 22 . G T 32.6981 . AB=0.0888889;ABP=927.865;AC=1;AF=0.0833333;AN=12;AO=153;CIGAR=1X;DP=4142;DPB=4142;DPRA=0.731272;EPP=335.246;EPPR=8658.5;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997742;PAO=0;PQA=0;PQR=0;PRO=0;QA=5921;QR=156968;RO=3986;RPL=0;RPP=335.246;RPPR=8658.5;RPR=153;RUN=1;SAF=153;SAP=335.246;SAR=0;SRF=3986;SRP=8658.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:630:574,56:574:22670:56:2155:-4.49142,0,-1848.8 0/0:654:619,35:619:24346:35:1374:0,-72.9475,-2065.21 0/0:499:470,28:470:18419:28:1107:0,-50.4001,-1556.36 0/0:677:642,34:642:25390:34:1285:0,-87.7692,-2167.02 0/0:733:733,0:733:28912:0:0:0,-220.655,-2599.55 0/0:949:948,0:948:37231:0:0:0,-285.376,-3347.12 dDocent_Contig_6567 17 . T C 188.135 . AB=0.093633;ABP=768.946;AC=1;AF=0.0833333;AN=12;AO=55;CIGAR=1X;DP=2539;DPB=2539;DPRA=1.37734;EPP=122.441;EPPR=5392.6;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997985;PAO=0;PQA=0;PQR=0;PRO=0;QA=2209;QR=99299;RO=2482;RPL=0;RPP=122.441;RPPR=5392.6;RPR=55;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=2482;SRP=5392.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:328:328,0:328:13019:0:0:0,-98.7378,-1170.75 0/0:466:465,0:465:18544:0:0:0,-139.979,-1666.98 0/0:274:274,0:274:11043:0:0:0,-82.4822,-993.061 0/0:453:449,4:449:18037:4:159:0,-121.674,-1607.11 0/0:484:482,1:482:19281:1:40:0,-141.806,-1729.64 0/1:534:484,50:484:19375:50:2010:-20.3364,0,-1581.33 dDocent_Contig_6568 23 . C A 83.2116 . AB=0.100671;ABP=209.388;AC=1;AF=0.0833333;AN=12;AO=22;CIGAR=1X;DP=657;DPB=657;DPRA=1.25;EPP=50.7827;EPPR=1379.72;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.916404;PAO=0;PQA=0;PQR=0;PRO=0;QA=873;QR=25384;RO=634;RPL=0;RPP=50.7827;RPPR=1379.72;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=634;SRP=1379.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:107:103,4:103:4127:4:152:0,-18.1647,-357.343 0/0:109:106,3:106:4215:3:117:0,-21.903,-368.407 0/0:81:81,0:81:3252:0:0:0,-24.3834,-292.734 0/1:149:134,15:134:5382:15:604:-9.84404,0,-439.347 0/0:85:85,0:85:3369:0:0:0,-25.5875,-303.255 0/0:126:125,0:125:5039:0:0:0,-37.6287,-453.174 dDocent_Contig_6569 9 . G T 1537.4 . AB=0.207895;ABP=284.639;AC=3;AF=0.25;AN=12;AO=81;CIGAR=1X;DP=675;DPB=675;DPRA=1.36464;EPP=178.9;EPPR=1232.78;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.976431;PAO=0;PQA=0;PQR=0;PRO=0;QA=3092;QR=22690;RO=594;RPL=0;RPP=178.9;RPPR=1292.86;RPR=81;RUN=1;SAF=81;SAP=178.9;SAR=0;SRF=587;SRP=1232.78;SRR=7;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:121:102,19:102:3887:19:736:-30.1466,0,-313.513 0/0:115:115,0:115:4403:0:0:0,-34.6184,-396.328 0/0:66:66,0:66:2531:0:0:0,-19.868,-227.991 0/0:114:112,2:112:4307:2:65:0,-28.1441,-381.523 0/1:130:116,14:116:4398:14:522:-8.18253,0,-356.754 0/1:129:83,46:83:3164:46:1769:-120.633,0,-246.083 dDocent_Contig_6570 22 . A C 350.206 . AB=0.11039;ABP=206.057;AC=1;AF=0.0833333;AN=12;AO=27;CIGAR=6M1X4M;DP=456;DPB=433.909;DPRA=1.14118;EPP=61.6401;EPPR=867.256;GTI=0;LEN=1;MEANALT=2.2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.888889;PAIREDR=0.977387;PAO=0;PQA=0;PQR=0;PRO=0;QA=1095;QR=15707;RO=398;RPL=0;RPP=61.6401;RPPR=867.256;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=398;SRP=867.256;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:65:63,0,2:63:2506:0,2:0,80:0,-18.9649,-225.296,-11.9752,-218.705,-218.103 0|0:68:68,0,0:68:2694:0,0:0,0:0,-20.47,-242.607,-20.47,-242.607,-242.607 0|1:44:40,0,4:40:1566:0,4:0,161:-1.62995,-13.6712,-142.419,0,-129.149,-127.945 0|0:58:56,0,2:56:2211:0,2:0,82:0,-16.8577,-198.765,-9.68006,-191.997,-191.394 0|0:111:93,8,6:93:3652:8,6:301,245:0,-3.33469,-301.301,-7.76343,-283.492,-306.345 0|0:110:78,19,13:78:3078:19,13:731,527:-36.5136,0,-247.525,-16.5273,-209.785,-265.876 dDocent_Contig_6571 11 . T C 3188.83 . AB=0.5311;ABP=4.76618;AC=6;AF=0.5;AN=12;AO=111;CIGAR=1X1M2I2M;DP=209;DPB=264.5;DPRA=0;EPP=244.044;EPPR=215.815;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4345;QR=3806;RO=98;RPL=0;RPP=244.044;RPPR=215.815;RPR=111;RUN=1;SAF=111;SAP=244.044;SAR=0;SRF=98;SRP=215.815;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:22:18,4:18:685:4:160:-8.16114,0,-55.3505 0|1:55:19,36:19:748:36:1405:-110.156,0,-51.0851 0|1:41:18,23:18:702:23:890:-68.0672,0,-51.1659 0|1:20:17,3:17:640:3:120:-5.16671,0,-51.9029 0|1:24:13,11:13:520:11:438:-32.5519,0,-39.9237 0|1:47:13,34:13:511:34:1332:-106.002,0,-32.187 dDocent_Contig_6572 11 . T A 7453.2 . AB=0.127745;ABP=5976.65;AC=5;AF=0.416667;AN=12;AO=683;CIGAR=1X;DP=5742;DPB=5742;DPRA=0;EPP=1486.13;EPPR=10986.3;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=1;PAIREDR=0.999802;PAO=0;PQA=0;PQR=0;PRO=0;QA=26924;QR=200718;RO=5058;RPL=0;RPP=1486.13;RPPR=10986.3;RPR=683;RUN=1;SAF=683;SAP=1486.13;SAR=0;SRF=5058;SRP=10986.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:779:730,49:730:28907:49:1934:0,-60.2351,-2424.86 0/1:986:846,140:846:33516:140:5568:-204.148,0,-2716.62 0/1:705:635,70:635:25258:70:2745:-34.959,0,-2058.76 0/1:907:820,86:820:32673:86:3382:-31.2931,0,-2664.49 0/1:1115:937,178:937:37304:178:6974:-291.747,0,-3018.28 0/1:1250:1090,160:1090:43060:160:6321:-192.394,0,-3495.18 dDocent_Contig_6574 61 . C T 2095.3 . AB=0.159011;ABP=860.45;AC=2;AF=0.166667;AN=12;AO=202;CIGAR=1X;DP=2265;DPB=2265;DPRA=1.60478;EPP=441.648;EPPR=4480.59;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.999515;PAO=0;PQA=0;PQR=0;PRO=0;QA=7724;QR=80386;RO=2062;RPL=202;RPP=441.648;RPPR=4480.59;RPR=0;RUN=1;SAF=202;SAP=441.648;SAR=0;SRF=2062;SRP=4480.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:326:306,20:306:11912:20:774:0,-28.1532,-1001.38 0/0:431:392,39:392:15214:39:1431:0,-0.706015,-1239.24 0/1:388:309,79:309:12034:79:3076:-160.164,0,-965.527 0/1:461:405,56:405:15802:56:2124:-52.5879,0,-1282.34 0/0:251:250,0:250:9780:0:0:0,-75.2575,-879.468 0/0:408:400,8:400:15644:8:319:0,-93.7428,-1377.81 dDocent_Contig_6575 24 . T G 622.468 . AB=0.128079;ABP=490.811;AC=2;AF=0.166667;AN=12;AO=84;CIGAR=1X;DP=1766;DPB=1766;DPRA=0;EPP=185.414;EPPR=3655.43;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.904762;PAIREDR=0.950059;PAO=0;PQA=0;PQR=0;PRO=0;QA=3355;QR=67320;RO=1682;RPL=0;RPP=185.414;RPPR=3655.43;RPR=84;RUN=1;SAF=84;SAP=185.414;SAR=0;SRF=1682;SRP=3655.43;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:201:195,6:195:7853:6:244:0,-38.1684,-683.98 0/0:163:153,10:153:6142:10:377:0,-14.7932,-518.252 0/1:144:125,19:125:5043:19:749:-24.3773,0,-410.374 0/1:262:229,33:229:9165:33:1330:-41.0914,0,-745.39 0/0:505:493,12:493:19695:12:491:0,-107.479,-1726.36 0/0:491:487,4:487:19422:4:164:0,-132.656,-1731.18 dDocent_Contig_6576 11 . T G 72192.4 . AB=0.768318;ABP=1846.5;AC=6;AF=0.5;AN=12;AO=2265;CIGAR=1X;DP=2948;DPB=2948;DPRA=0;EPP=4921.4;EPPR=1483.95;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.9404;MQMR=59.9824;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998234;PAIREDR=0.995601;PAO=0;PQA=0;PQR=0;PRO=0;QA=90311;QR=27114;RO=682;RPL=0;RPP=4921.4;RPPR=1483.95;RPR=2265;RUN=1;SAF=2265;SAP=4921.4;SAR=0;SRF=682;SRP=1483.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:397:110,287:110:4352:287:11436:-908.945,0,-272.133 0/1:488:133,355:133:5324:355:14063:-1117.71,0,-332.091 0/1:344:46,298:46:1837:298:11854:-959.527,0,-61.987 0/1:392:61,331:61:2468:331:13254:-1073.85,0,-104.247 0/1:624:139,484:139:5465:484:19332:-1550.32,0,-303.748 0/1:703:193,510:193:7668:510:20372:-1620.11,0,-478.069 dDocent_Contig_6577 17 . C T 1638.05 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=4;CIGAR=1X1M1X;DP=617;DPB=617;DPRA=0;EPP=11.6962;EPPR=1032.29;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=59.8186;NS=6;NUMALT=3;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.972574;PAO=0;PQA=0;PQR=0;PRO=0;QA=153;QR=18660;RO=474;RPL=0;RPP=11.6962;RPPR=1032.29;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=474;SRP=1032.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:74:53,0,5,16:53:2081:0,5,16:0,204,637:-36.4869,-52.4415,-223.588,-35.6078,-206.755,-205.25,0,-171.138,-154.305,-166.321 0|0:98:80,0,1,16:80:3144:0,1,16:0,10,626:-27.5048,-51.5872,-310.187,-51.0044,-309.591,-309.29,0,-258.724,-258.129,-253.908 0|0:63:53,4,2,3:53:2087:4,2,3:153,76,117:0,-3.40101,-173.887,-9.72309,-168.859,-180.811,-6.33493,-165.474,-171.796,-177.125 0|0:86:50,0,8,26:50:1951:0,8,26:0,307,1034:-70.0858,-85.1373,-245.493,-59.9476,-220.3,-217.892,0,-160.359,-135.167,-152.532 0|0:156:130,0,14,12:130:5102:0,14,12:0,558,465:-6.82118,-45.9551,-462.698,0,-416.748,-412.533,-7.76315,-424.501,-378.551,-420.888 0|0:140:108,0,9,20:108:4295:0,9,20:0,361,786:-32.1286,-64.6399,-418.261,-34.8947,-388.518,-385.808,0,-353.617,-323.874,-347.596 dDocent_Contig_6578 22 . T C 82.8503 . AB=0.111111;ABP=121.235;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=519;DPB=519;DPRA=1.04895;EPP=24.725;EPPR=1108.29;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=406;QR=20229;RO=509;RPL=0;RPP=24.725;RPPR=1108.29;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=509;SRP=1108.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:59,0:59:2309:0:0:0,-17.7608,-207.967 0/0:102:102,0:102:4023:0:0:0,-30.7051,-362.056 0/1:90:80,10:80:3171:10:406:-9.80791,0,-258.381 0/0:100:100,0:100:4008:0:0:0,-30.103,-360.705 0/0:62:62,0:62:2467:0:0:0,-18.6639,-222.175 0/0:106:106,0:106:4251:0:0:0,-31.9092,-382.542 dDocent_Contig_6579 145 . C T 43.5622 . AB=0.666667;ABP=3.73412;AC=1;AF=0.125;AN=8;AO=2;CIGAR=1X;DP=7;DPB=7;DPRA=2.25;EPP=7.35324;EPPR=13.8677;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=40;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=78;QR=194;RO=5;RPL=0;RPP=7.35324;RPPR=13.8677;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=13.8677;SRR=5;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 0/0:2:2,0:2:79:0:0:0,-0.60206,-6.97786 0/1:3:1,2:1:35:2:78:-6.01916,0,-2.47761 0/0:1:1,0:1:40:0:0:0,-0.30103,-3.69899 ./.:.:.:.:.:.:.:. 0/0:1:1,0:1:40:0:0:0,-0.30103,-3.69899 dDocent_Contig_6580 71 . G A 91463.7 . AB=0.547242;ABP=114.417;AC=6;AF=0.5;AN=12;AO=3145;CIGAR=1X;DP=5747;DPB=5747;DPRA=0;EPP=6832.29;EPPR=5627.12;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999682;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=121031;QR=100571;RO=2590;RPL=3145;RPP=6832.29;RPPR=5627.12;RPR=0;RUN=1;SAF=3145;SAP=6832.29;SAR=0;SRF=2590;SRP=5627.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:915:442,473:442:16800:473:17804:-1326.07,0,-1235.75 0/1:968:489,478:489:18475:478:17751:-1305.53,0,-1370.56 0/1:771:359,412:359:14044:412:16193:-1224.08,0,-1030.86 0/1:1057:501,556:501:19809:556:21612:-1625.26,0,-1463.02 0/1:1059:509,539:509:20132:539:20767:-1551.61,0,-1494.37 0/1:977:290,687:290:11311:687:26904:-2125.05,0,-723.184 dDocent_Contig_6581 95 . T C 1113.64 . AB=0.401869;ABP=11.96;AC=2;AF=0.166667;AN=12;AO=43;CIGAR=1X;DP=334;DPB=334;DPRA=0.942731;EPP=96.3836;EPPR=630.566;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.744186;PAIREDR=0.539792;PAO=0;PQA=0;PQR=0;PRO=0;QA=1624;QR=10487;RO=289;RPL=22;RPP=3.0608;RPPR=52.308;RPR=21;RUN=1;SAF=22;SAP=3.0608;SAR=21;SRF=185;SRP=52.308;SRR=104;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:40,0:40:1448:0:0:0,-12.0412,-130.602 0/0:70:70,0:70:2525:0:0:0,-21.0721,-227.449 0/0:54:52,0:52:1894:0:0:0,-15.6536,-170.334 0/0:63:63,0:63:2262:0:0:0,-18.9649,-203.806 0/1:43:32,11:32:1195:11:419:-25.1133,0,-94.8997 0/1:64:32,32:32:1163:32:1205:-89.4724,0,-85.6983 dDocent_Contig_6582 107 . N A 312.197 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=10;CIGAR=1X;DP=10;DPB=10;DPRA=0;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=331;QR=0;RO=0;RPL=0;RPP=24.725;RPPR=0;RPR=10;RUN=1;SAF=0;SAP=24.725;SAR=10;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:54:-5.12867,-0.60206,0 1/1:3:0,3:0:0:3:104:-9.70309,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:173:-15.9102,-1.50515,0 ./.:.:.:.:.:.:.:. dDocent_Contig_6583 114 . A G 44.9563 . AB=0.208333;ABP=20.744;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=146;DPB=146;DPRA=2.11268;EPP=22.5536;EPPR=298.331;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=282;QR=4603;RO=136;RPL=0;RPP=22.5536;RPPR=298.331;RPR=9;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=298.331;SRR=136;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:654:0:0:0,-5.71957,-59.1831 0/0:16:16,0:16:552:0:0:0,-4.81648,-50.0069 0/0:51:47,4:47:1592:4:138:0,-2.59208,-130.806 0/1:24:19,5:19:660:5:144:-6.01849,0,-52.5002 0/0:19:19,0:19:616:0:0:0,-5.71957,-55.7454 0/0:17:16,0:16:529:0:0:0,-4.81648,-47.6686 dDocent_Contig_6584 98 . N A 170.754 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=171;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:65:-6.17329,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:2:0,2:0:0:2:64:-6.07866,-0.60206,0 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 dDocent_Contig_6585 87 . G A 22445 . AB=0.688337;ABP=325.277;AC=7;AF=0.583333;AN=12;AO=858;CIGAR=1X;DP=1197;DPB=1197;DPRA=0;EPP=1866.13;EPPR=736.968;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.991841;PAIREDR=0.902367;PAO=0;PQA=0;PQR=0;PRO=0;QA=28931;QR=11469;RO=338;RPL=858;RPP=1866.13;RPPR=736.968;RPR=0;RUN=1;SAF=858;SAP=1866.13;SAR=0;SRF=338;SRP=736.968;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:215:56,159:56:1902:159:5325:-414.698,0,-106.738 0/1:174:80,94:80:2721:94:3163:-232.531,0,-192.766 0/1:90:25,65:25:882:65:2229:-173.781,0,-52.6058 1/1:151:12,138:12:400:138:4655:-382.823,-8.92362,0 0/1:282:50,232:50:1652:232:7843:-621.073,0,-64.0703 0/1:285:115,170:115:3912:170:5716:-428.81,0,-266.502 dDocent_Contig_6586 1 . N G 194.524 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=204;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:123:-11.4648,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6587 31 . A T 4526.34 . AB=0.377574;ABP=59.9009;AC=5;AF=0.416667;AN=12;AO=168;CIGAR=1X;DP=493;DPB=493;DPRA=0;EPP=367.818;EPPR=708.739;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.97619;PAIREDR=0.963077;PAO=0;PQA=0;PQR=0;PRO=0;QA=6701;QR=12934;RO=325;RPL=0;RPP=367.818;RPPR=708.739;RPR=168;RUN=1;SAF=168;SAP=367.818;SAR=0;SRF=325;SRP=708.739;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:81:55,26:55:2193:26:1033:-68.8809,0,-173.155 0/1:112:77,35:77:3049:35:1391:-91.7208,0,-240.784 0/1:77:52,25:52:2066:25:970:-64.4136,0,-162.948 0/1:81:32,49:32:1262:49:1971:-153.199,0,-89.4694 0/0:56:53,3:53:2128:3:122:0,-5.48519,-180.323 0/1:86:56,30:56:2236:30:1214:-83.6412,0,-175.521 dDocent_Contig_6588 13 . C T 35.192 . AB=0.0963855;ABP=237.896;AC=3;AF=0.25;AN=12;AO=22;CIGAR=1X;DP=377;DPB=377;DPRA=0;EPP=50.7827;EPPR=773.883;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=864;QR=14202;RO=355;RPL=0;RPP=50.7827;RPPR=773.883;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=355;SRP=773.883;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:44:40,4:40:1599:4:155:-1.07982,0,-130.9 0/1:42:38,4:38:1522:4:160:-2.14033,0,-124.572 0/0:98:96,2:96:3860:2:78:0,-22.0982,-339.986 0/0:48:47,1:47:1854:1:40:0,-10.4538,-163.073 0/0:65:62,3:62:2472:3:117:0,-8.65674,-211.715 0/1:80:72,8:72:2895:8:314:-4.54324,0,-236.556 dDocent_Contig_6589 79 . G A 49.0423 . AB=0.117318;ABP=230.699;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1X;DP=431;DPB=431;DPRA=1.42411;EPP=52.9542;EPPR=888.971;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.521739;PAIREDR=0.813725;PAO=0;PQA=0;PQR=0;PRO=0;QA=730;QR=13624;RO=408;RPL=23;RPP=52.9542;RPPR=888.971;RPR=0;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=408;SRP=888.971;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:53:53,0:53:1761:0:0:0,-15.9546,-158.771 0/1:93:82,11:82:2734:11:364:-5.08233,0,-218.319 0/0:54:53,1:53:1760:1:36:0,-12.6573,-155.063 0/1:86:76,10:76:2602:10:318:-3.03709,0,-208.523 0/0:59:59,0:59:1943:0:0:0,-17.7608,-175.144 0/0:86:85,1:85:2824:1:12:0,-24.6886,-253.212 dDocent_Contig_6590 22 . G C 2897.2 . AB=0.298876;ABP=159.361;AC=6;AF=0.5;AN=12;AO=133;CIGAR=1X;DP=445;DPB=445;DPRA=0;EPP=291.816;EPPR=678.338;GTI=0;LEN=1;MEANALT=1.16667;MQM=39.7218;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.992481;PAIREDR=0.807074;PAO=0;PQA=0;PQR=0;PRO=0;QA=5380;QR=12222;RO=311;RPL=0;RPP=291.816;RPPR=678.338;RPR=133;RUN=1;SAF=133;SAP=291.816;SAR=0;SRF=311;SRP=678.338;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:57:36,20:36:1385:20:813:-39.609,0,-107.68 0/1:92:60,32:60:2365:32:1302:-77.5839,0,-185.308 0/1:72:52,20:52:2081:20:811:-45.325,0,-165.802 0/1:103:72,31:72:2796:31:1248:-75.3272,0,-220.762 0/1:59:48,11:48:1899:11:433:-17.675,0,-153.353 0/1:62:43,19:43:1696:19:773:-45.422,0,-134.2 dDocent_Contig_6591 56 . C T 59.1426 . AB=0.121622;ABP=95.0338;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=215;DPB=215;DPRA=1.14375;EPP=10.1038;EPPR=437.305;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.733333;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=545;QR=7585;RO=200;RPL=15;RPP=35.5824;RPPR=437.305;RPR=0;RUN=1;SAF=11;SAP=10.1038;SAR=4;SRF=200;SRP=437.305;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:29,3:29:1066:3:90:0,-1.23938,-87.8383 0/1:58:52,6:52:1972:6:234:-3.97066,0,-160.246 0/0:32:32,0:32:1230:0:0:0,-9.63296,-110.983 0/0:46:44,2:44:1673:2:76:0,-6.63312,-143.612 0/1:16:13,3:13:500:3:107:-5.16458,0,-40.53 0/0:31:30,1:30:1144:1:38:0,-5.53466,-99.4533 dDocent_Contig_6592 22 . T C 199.183 . AB=0.171875;ABP=62.8615;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=426;DPB=426;DPRA=0.968966;EPP=39.9253;EPPR=891.143;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.764706;PAIREDR=0.577017;PAO=0;PQA=0;PQR=0;PRO=0;QA=686;QR=16392;RO=409;RPL=0;RPP=39.9253;RPPR=891.143;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=409;SRP=891.143;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:64:53,11:53:2096:11:445:-21.1402,0,-169.557 0/0:81:81,0:81:3254:0:0:0,-24.3834,-292.912 0/0:58:55,3:55:2208:3:121:0,-6.17954,-187.601 0/0:77:75,2:75:3021:2:80:0,-15.5877,-264.37 0/0:64:64,0:64:2545:0:0:0,-19.2659,-229.179 0/0:82:81,1:81:3268:1:40:0,-20.6888,-290.176 dDocent_Contig_6593 12 . A C 114.889 . AB=0.120879;ABP=116.619;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=393;DPB=393;DPRA=1.50662;EPP=26.8965;EPPR=832.513;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=445;QR=15238;RO=382;RPL=0;RPP=26.8965;RPPR=832.513;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=382;SRP=832.513;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:66:66,0:66:2645:0:0:0,-19.868,-238.169 0/0:72:72,0:72:2893:0:0:0,-21.6742,-260.459 0/0:42:42,0:42:1675:0:0:0,-12.6433,-150.979 0/0:82:82,0:82:3273:0:0:0,-24.6845,-294.634 0/0:40:40,0:40:1594:0:0:0,-12.0412,-143.694 0/1:91:80,11:80:3158:11:445:-13.0118,0,-256.899 dDocent_Contig_6594 34 . C A 233.659 . AB=0.208791;ABP=70.0396;AC=5;AF=0.416667;AN=12;AO=19;CIGAR=1X;DP=112;DPB=112;DPRA=0.866667;EPP=44.2683;EPPR=204.957;GTI=0;LEN=1;MEANALT=1;MQM=56.5789;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.368421;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=650;QR=3518;RO=93;RPL=0;RPP=44.2683;RPPR=204.957;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=93;SRP=204.957;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:11:9,2:9:355:2:65:-2.48437,0,-29.0009 0/1:15:10,5:10:366:5:170:-11.1194,0,-28.7662 0/1:8:6,2:6:236:2:65:-3.76521,0,-19.2039 0/1:26:23,3:23:883:3:104:-1.83897,0,-71.9597 0/0:21:21,0:21:768:0:0:0,-6.32163,-69.4242 0/1:31:24,7:24:910:7:246:-13.1497,0,-72.8732 dDocent_Contig_6596 107 . N T 214.817 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=218;QR=0;RO=0;RPL=0;RPP=18.2106;RPPR=0;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:58:-5.50862,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:55:-5.22366,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 dDocent_Contig_6597 50 . C T 4768.49 . AB=0.18102;ABP=1614.13;AC=2;AF=0.166667;AN=12;AO=334;CIGAR=1X;DP=4048;DPB=4048;DPRA=1.57803;EPP=728.282;EPPR=8067.86;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.971729;PAO=0;PQA=0;PQR=0;PRO=0;QA=11582;QR=147190;RO=3714;RPL=334;RPP=728.282;RPPR=8067.86;RPR=0;RUN=1;SAF=334;SAP=728.282;SAR=0;SRF=3714;SRP=8067.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:488:488,0:488:19273:0:0:0,-146.903,-1733.03 0/0:620:617,3:617:24519:3:114:0,-176.007,-2193.96 0/0:486:486,0:486:19232:0:0:0,-146.301,-1729.29 0/0:631:630,1:630:25070:1:38:0,-186.153,-2250.33 0/1:812:694,118:694:27435:118:4136:-127.956,0,-2222.35 0/1:1011:799,212:799:31661:212:7294:-352.115,0,-2542.32 dDocent_Contig_6598 92 . G A 939.33 . AB=0.245283;ABP=122.482;AC=3;AF=0.25;AN=12;AO=53;CIGAR=1X;DP=374;DPB=374;DPRA=1.08475;EPP=118.098;EPPR=700.053;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1835;QR=10995;RO=321;RPL=53;RPP=118.098;RPPR=700.053;RPR=0;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=321;SRP=700.053;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:964:0:0:0,-8.42884,-87.0729 0/1:86:70,16:70:2375:16:546:-23.5754,0,-188.121 0/1:58:36,22:36:1247:22:765:-51.7092,0,-95.0704 0/1:68:54,14:54:1838:14:489:-23.8702,0,-145.23 0/0:44:43,1:43:1463:1:35:0,-9.74669,-128.462 0/0:90:90,0:90:3108:0:0:0,-27.0927,-279.962 dDocent_Contig_6599 37 . G A 167.028 . AB=0.164179;ABP=68.6406;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=218;DPB=218;DPRA=1.29474;EPP=35.5824;EPPR=443.819;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.6;PAIREDR=0.591133;PAO=0;PQA=0;PQR=0;PRO=0;QA=592;QR=8047;RO=203;RPL=0;RPP=35.5824;RPPR=443.819;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=203;SRP=443.819;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:941:0:0:0,-7.22472,-84.9835 0/0:56:52,4:52:2016:4:155:0,-2.53383,-167.308 0/0:26:26,0:26:1042:0:0:0,-7.82678,-94.0702 0/0:45:45,0:45:1813:0:0:0,-13.5463,-163.382 0/1:28:25,3:25:998:3:123:-3.03595,0,-81.6899 0/1:39:31,8:31:1237:8:314:-16.882,0,-99.8575 dDocent_Contig_6600 1 . N G 147.497 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=152;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 1/1:3:0,3:0:0:3:111:-10.3528,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6601 94 . T G 59.9466 . AB=0.130435;ABP=57.5803;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=437;DPB=437;DPRA=0.616766;EPP=3.32051;EPPR=50.6359;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.571429;PAIREDR=0.480186;PAO=0;PQA=0;PQR=0;PRO=0;QA=259;QR=15575;RO=429;RPL=7;RPP=18.2106;RPPR=900.152;RPR=0;RUN=1;SAF=3;SAP=3.32051;SAR=4;SRF=259;SRP=43.1041;SRR=170;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:46:40,6:40:1487:6:230:-7.21651,0,-120.251 0/0:102:102,0:102:3698:0:0:0,-30.7051,-332.961 0/0:49:49,0:49:1808:0:0:0,-14.7505,-162.963 0/0:57:55,1:55:1941:1:29:0,-14.203,-172.079 0/0:87:87,0:87:3166:0:0:0,-26.1896,-285.112 0/0:96:96,0:96:3475:0:0:0,-28.8989,-312.905 dDocent_Contig_6602 83 . C T 7548.91 . AB=0.192643;ABP=2166.78;AC=2;AF=0.166667;AN=12;AO=562;CIGAR=1X;DP=5918;DPB=5918;DPRA=1.65044;EPP=1223.38;EPPR=11613.9;GTI=0;LEN=1;MEANALT=2.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999813;PAO=0;PQA=0;PQR=0;PRO=0;QA=19037;QR=182822;RO=5347;RPL=562;RPP=1223.38;RPPR=11613.9;RPR=0;RUN=1;SAF=562;SAP=1223.38;SAR=0;SRF=5347;SRP=11613.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:771:770,0:770:26342:0:0:0,-231.793,-2370.04 0/0:949:940,8:940:32106:8:270:0,-260.838,-2864.24 0/0:605:604,0:604:20668:0:0:0,-181.822,-1859.67 0/0:956:909,46:909:31028:46:1539:0,-148.948,-2653.06 0/1:1291:1123,164:1123:38455:164:5569:-113.781,0,-3072.45 0/1:1346:1001,344:1001:34223:344:11659:-644.331,0,-2674.35 dDocent_Contig_6603 15 . C T 17113.3 . AB=0.305243;ABP=706.73;AC=6;AF=0.5;AN=12;AO=652;CIGAR=1X;DP=2136;DPB=2136;DPRA=0;EPP=1418.81;EPPR=3225.48;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998466;PAIREDR=0.999326;PAO=0;PQA=0;PQR=0;PRO=0;QA=26289;QR=59378;RO=1484;RPL=0;RPP=1418.81;RPPR=3225.48;RPR=652;RUN=1;SAF=652;SAP=1418.81;SAR=0;SRF=1484;SRP=3225.48;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:251:188,63:188:7512:63:2521:-151.458,0,-600.127 0/1:408:266,142:266:10636:142:5744:-393.904,0,-833.689 0/1:188:167,21:167:6711:21:856:-20.7547,0,-547.085 0/1:327:216,111:216:8632:111:4478:-304.496,0,-677.927 0/1:449:286,163:286:11445:163:6560:-454.933,0,-894.082 0/1:513:361,152:361:14442:152:6130:-397.005,0,-1144.22 dDocent_Contig_6604 44 . C A 1948.29 . AB=0.126446;ABP=1575.04;AC=3;AF=0.25;AN=12;AO=178;CIGAR=1X;DP=2880;DPB=2880;DPRA=1.02814;EPP=389.532;EPPR=5716.36;GTI=0;LEN=1;MEANALT=2.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99662;PAO=0;PQA=0;PQR=0;PRO=0;QA=6999;QR=106407;RO=2663;RPL=0;RPP=389.532;RPPR=5785.64;RPR=178;RUN=1;SAF=178;SAP=389.532;SAR=0;SRF=2655;SRP=5716.36;SRR=8;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:442:380,51:380:15137:51:1996:-49.7052,0,-1231.04 0/1:572:485,71:485:19399:71:2799:-84.2543,0,-1576.5 0/1:283:233,42:233:9304:42:1656:-66.0917,0,-753.588 0/0:469:467,0:467:18722:0:0:0,-140.581,-1683 0/0:523:511,11:511:20463:11:428:0,-118.64,-1801.05 0/0:591:587,3:587:23382:3:120:0,-166.827,-2091.15 dDocent_Contig_6606 19 . T A 67.2936 . AB=0.173913;ABP=24.253;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=210;DPB=210;DPRA=0.846154;EPP=20.3821;EPPR=441.648;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.5;PAIREDR=0.539604;PAO=0;PQA=0;PQR=0;PRO=0;QA=320;QR=7561;RO=202;RPL=0;RPP=20.3821;RPPR=441.648;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=202;SRP=441.648;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:19,4:19:740:4:161:-7.95121,0,-60.0059 0/0:44:43,1:43:1590:1:38:0,-9.44805,-139.568 0/0:34:32,2:32:1183:2:81:0,-2.54929,-99.0723 0/0:31:30,1:30:1125:1:40:0,-5.33625,-97.5428 0/0:31:31,0:31:1186:0:0:0,-9.33193,-107.037 0/0:47:47,0:47:1737:0:0:0,-14.1484,-156.578 dDocent_Contig_6607 125 . G T 1017.64 . AB=0.201238;ABP=253.429;AC=1;AF=0.0833333;AN=12;AO=67;CIGAR=1X;DP=1761;DPB=1761;DPRA=1.40574;EPP=148.499;EPPR=3677.14;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2255;QR=56944;RO=1692;RPL=0;RPP=148.499;RPPR=3677.14;RPR=67;RUN=1;SAF=0;SAP=148.499;SAR=67;SRF=0;SRP=3677.14;SRR=1692;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:295:295,0:295:10010:0:0:0,-88.8038,-900.918 0/0:307:306,1:306:10379:1:10:0,-91.4162,-933.114 0/0:220:219,0:219:7213:0:0:0,-65.9256,-648.935 0/0:399:397,1:397:13285:1:20:0,-118.08,-1193.49 0/0:217:217,0:217:7262:0:0:0,-65.3235,-653.69 0/1:323:258,65:258:8795:65:2225:-103.287,0,-694.373 dDocent_Contig_6608 98 . N C 158.657 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=159;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:95:-8.86398,-0.90309,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 dDocent_Contig_6609 15 . T C 201.496 . AB=0.113208;ABP=278.5;AC=2;AF=0.166667;AN=12;AO=25;CIGAR=1X;DP=1118;DPB=1118;DPRA=0.817886;EPP=57.2971;EPPR=2376.43;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.988106;PAO=0;PQA=0;PQR=0;PRO=0;QA=971;QR=43661;RO=1093;RPL=0;RPP=57.2971;RPPR=2376.43;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=1093;SRP=2376.43;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:60:52,8:52:2093:8:318:-10.9228,0,-170.489 0/0:132:132,0:132:5283:0:0:0,-39.736,-475.326 0/1:152:136,16:136:5457:16:643:-12.4486,0,-445.204 0/0:127:127,0:127:5089:0:0:0,-38.2308,-457.883 0/0:356:356,0:356:14217:0:0:0,-107.167,-1278.46 0/0:291:290,1:290:11522:1:10:0,-86.5997,-1035.19 dDocent_Contig_6610 55 . T G 241.007 . AB=0.122271;ABP=286.809;AC=2;AF=0.166667;AN=12;AO=39;CIGAR=1X;DP=748;DPB=748;DPRA=0.864964;EPP=87.6977;EPPR=1538.24;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.967468;PAO=0;PQA=0;PQR=0;PRO=0;QA=1501;QR=27773;RO=707;RPL=39;RPP=87.6977;RPPR=1538.24;RPR=0;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=707;SRP=1538.24;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:101:98,3:98:3799:3:123:0,-18.9392,-330.479 0/0:144:136,8:136:5321:8:316:0,-14.5445,-449.982 0/1:83:75,8:75:2932:8:323:-4.4531,0,-239.026 0/1:146:126,20:126:4952:20:739:-22.8692,0,-401.662 0/0:112:110,0:110:4306:0:0:0,-33.1133,-387.313 0/0:162:162,0:162:6463:0:0:0,-48.7669,-581.416 dDocent_Contig_6611 20 . G A 193.766 . AB=0.137931;ABP=135.096;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=296;DPB=296;DPRA=1.28889;EPP=37.7539;EPPR=611.023;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.910714;PAO=0;PQA=0;PQR=0;PRO=0;QA=631;QR=10985;RO=280;RPL=0;RPP=37.7539;RPPR=611.023;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=280;SRP=611.023;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:43:43,0:43:1689:0:0:0,-12.9443,-152.248 0/0:61:61,0:61:2425:0:0:0,-18.3628,-218.411 0/0:27:27,0:27:1018:0:0:0,-8.12781,-91.9072 0/0:49:49,0:49:1920:0:0:0,-14.7505,-173.02 0/1:58:51,7:51:2005:7:277:-7.83889,0,-163.188 0/1:58:49,9:49:1928:9:354:-14.7595,0,-156.271 dDocent_Contig_6612 9 . G A 10615.1 . AB=0.288932;ABP=604.338;AC=5;AF=0.416667;AN=12;AO=455;CIGAR=1X;DP=1634;DPB=1634;DPRA=0;EPP=991.03;EPPR=2563.18;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.995604;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=17319;QR=45004;RO=1179;RPL=0;RPP=991.03;RPPR=2563.18;RPR=455;RUN=1;SAF=455;SAP=991.03;SAR=0;SRF=1179;SRP=2563.18;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:306:185,121:185:7030:121:4579:-320.056,0,-540.473 0/1:521:387,134:387:14764:134:5127:-304.61,0,-1171.25 0/1:306:213,93:213:8114:93:3536:-226.257,0,-637.939 0/1:302:257,45:257:9838:45:1702:-62.5303,0,-794.18 0/0:80:74,6:74:2834:6:232:0,-2.83334,-233.986 0/1:119:63,56:63:2424:56:2143:-157.276,0,-182.544 dDocent_Contig_6613 1 . N G 115.084 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=116;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:77:-7.30914,-0.60206,0 1/1:1:0,1:0:0:1:39:-3.89656,-0.30103,0 dDocent_Contig_6614 208 . T G 4220.75 . AB=0.226399;ABP=781.303;AC=4;AF=0.333333;AN=12;AO=292;CIGAR=1X;DP=2135;DPB=2135;DPRA=0.862189;EPP=637.08;EPPR=3998.52;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9430;QR=69128;RO=1840;RPL=292;RPP=637.08;RPPR=3998.52;RPR=0;RUN=1;SAF=0;SAP=637.08;SAR=292;SRF=0;SRP=3998.52;SRR=1840;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:250:195,55:195:7322:55:1795:-86.5768,0,-583.601 0/1:313:258,55:258:9580:55:1778:-66.0797,0,-767.713 0/1:335:229,106:229:8589:106:3398:-205.212,0,-671.948 0/1:299:242,55:242:9154:55:1788:-71.4279,0,-733.829 0/0:402:401,0:401:15174:0:0:0,-120.713,-1364.59 0/0:536:515,21:515:19309:21:671:0,-100.659,-1676.16 dDocent_Contig_6615 20 . C G 2521.18 . AB=0.0521739;ABP=203.333;AC=0;AF=0;AN=12;AO=12;CIGAR=1M10I3M2I7M1X1M;DP=608;DPB=690.769;DPRA=0;EPP=29.068;EPPR=1012.74;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.989247;PAO=0;PQA=0;PQR=0;PRO=0;QA=470;QR=18080;RO=465;RPL=0;RPP=29.068;RPPR=1012.74;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=465;SRP=1012.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:90:49,0,38:49:1895:0,38:0,1394:-99.1591,-113.91,-269.566,0,-155.635,-144.195 0|0:115:94,6,13:94:3646:6,13:237,479:-10.8537,-19.6419,-317.393,0,-280.032,-295.622 0|0:36:23,0,12:23:898:0,12:0,443:-29.268,-36.1917,-110.021,0,-73.7993,-70.1869 0|0:165:107,0,52:107:4155:0,52:0,1867:-120.059,-152.269,-493.688,0,-341.432,-325.779 0|0:72:70,1,0:70:2720:1,0:39,0:0,-17.8712,-241.064,-21.0721,-241.365,-244.571 0|0:130:122,5,0:122:4766:5,0:194,0:0,-20.7501,-411.116,-36.7257,-412.621,-428.56 dDocent_Contig_6616 1 . N G 77.8076 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 dDocent_Contig_6617 98 . N C 368.474 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=12;CIGAR=1X;DP=12;DPB=12;DPRA=0;EPP=29.068;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=383;QR=0;RO=0;RPL=12;RPP=29.068;RPPR=0;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 1/1:3:0,3:0:0:3:105:-9.79616,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:110:-10.1724,-1.20412,0 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 dDocent_Contig_6618 16 . C T 22961.4 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=745;CIGAR=1X;DP=746;DPB=746;DPRA=0;EPP=1535.06;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=40;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=26795;QR=0;RO=0;RPL=0;RPP=1620.76;RPPR=0;RPR=745;RUN=1;SAF=735;SAP=1535.06;SAR=10;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:144:0,144:0:0:144:5098:-437.545,-43.3483,0 1/1:162:0,162:0:0:162:5912:-505.249,-48.7669,0 1/1:87:0,87:0:0:87:3117:-266.299,-26.1896,0 1/1:169:0,169:0:0:169:6069:-520.933,-50.8741,0 1/1:32:0,32:0:0:32:1192:-101.748,-9.63296,0 1/1:152:0,151:0:0:151:5407:-463.523,-45.4555,0 dDocent_Contig_6620 69 . T C 760.241 . AB=0.153425;ABP=383.815;AC=4;AF=0.333333;AN=12;AO=57;CIGAR=1X;DP=569;DPB=569;DPRA=1.03696;EPP=126.784;EPPR=1114.8;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.631579;PAIREDR=0.470703;PAO=0;PQA=0;PQR=0;PRO=0;QA=2172;QR=19772;RO=512;RPL=57;RPP=126.784;RPPR=1114.8;RPR=0;RUN=1;SAF=57;SAP=126.784;SAR=0;SRF=512;SRP=1114.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:81:72,9:72:2729:9:345:-7.02522,0,-221.41 0/1:104:91,13:91:3423:13:469:-11.2318,0,-276.908 0/1:61:43,18:43:1650:18:702:-45.1366,0,-130.362 0/1:119:103,16:103:4058:16:615:-19.8523,0,-329.4 0/0:92:92,0:92:3577:0:0:0,-27.6948,-321.984 0/0:112:111,1:111:4335:1:41:0,-29.6208,-386.033 dDocent_Contig_6621 35 . C T 283.446 . AB=0.230769;ABP=43.9342;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=156;DPB=156;DPRA=1.42857;EPP=35.5824;EPPR=307.016;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992857;PAO=0;PQA=0;PQR=0;PRO=0;QA=561;QR=5650;RO=140;RPL=0;RPP=35.5824;RPPR=307.016;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=140;SRP=307.016;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:814:0:0:0,-6.0206,-73.5745 0/0:30:30,0:30:1217:0:0:0,-9.0309,-109.798 0/0:15:15,0:15:607:0:0:0,-4.51545,-54.9663 0/0:26:26,0:26:1040:0:0:0,-7.82678,-93.89 0/1:26:23,3:23:933:3:123:-3.63801,0,-76.4451 0/1:39:26,12:26:1039:12:438:-27.9267,0,-81.9784 dDocent_Contig_6622 32 . T C 30281.3 . AB=0.0394402;ABP=2899.28;AC=0;AF=0;AN=12;AO=62;CIGAR=3X3M1X4M1X;DP=1917;DPB=1916.92;DPRA=0;EPP=137.642;EPPR=185.414;GTI=0;LEN=1;MEANALT=29;MQM=60;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=0.967742;PAIREDR=0.857143;PAO=0;PQA=0;PQR=0;PRO=0;QA=2328;QR=3284;RO=84;RPL=0;RPP=137.642;RPPR=185.414;RPR=62;RUN=1;SAF=62;SAP=137.642;SAR=0;SRF=84;SRP=185.414;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:264:13,9,12,60,18,9,1,72,8,6:13:507:9,12,60,18,9,1,72,8,6:357,471,2275,657,316,31,2814,299,219:-372.189,-346.714,-385.678,-337.365,-349.65,-375.426,-189.661,-201.947,-192.598,-213.273,-325.358,-337.643,-328.295,-180.592,-361.613,-350.396,-362.681,-353.332,-205.629,-341.325,-389.36,-373.614,-385.899,-376.55,-228.847,-364.543,-389.581,-414.986,-144.769,-157.054,-147.705,0,-135.699,-160.736,-183.954,-164.768,-351.621,-363.906,-354.557,-206.853,-342.55,-367.587,-390.805,-161.961,-390.885,-358.212,-370.497,-361.148,-213.445,-349.141,-374.179,-397.397,-168.552,-375.403,-398.079 0|0:252:12,1,13,72,19,0,0,43,13,15:12:450:1,13,72,19,0,0,43,13,15:41,510,2764,727,0,0,1709,488,573:-327.091,-327.319,-363.867,-288.76,-322.224,-321.695,-103.858,-137.322,-98.7627,-119.032,-274.16,-307.625,-269.065,-84.1639,-305.289,-330.703,-364.168,-325.608,-140.707,-311.009,-367.552,-330.703,-364.168,-325.608,-140.707,-311.009,-367.552,-367.552,-189.999,-223.463,-184.904,0,-170.304,-226.848,-226.848,-213.903,-290.736,-324.201,-285.641,-100.739,-271.042,-327.585,-327.585,-186.88,-323.671,-283.696,-317.161,-278.601,-93.6994,-264.002,-320.545,-320.545,-179.84,-280.578,-316.029 0|0:219:19,11,4,67,16,0,0,43,4,4:19:745:11,4,67,16,0,0,43,4,4:441,153,2529,629,0,0,1687,150,150:-278.978,-248.363,-306.315,-272.143,-297.072,-332.203,-77.4686,-102.397,-126.178,-118.563,-235.852,-260.78,-284.561,-89.8869,-292.299,-284.698,-309.626,-333.407,-138.732,-297.115,-345.961,-284.698,-309.626,-333.407,-138.732,-297.115,-345.961,-345.961,-145.965,-170.894,-194.674,0,-158.383,-207.229,-207.229,-194.285,-272.411,-297.34,-321.121,-126.446,-284.829,-333.675,-333.675,-194.943,-332.471,-272.413,-297.341,-321.122,-126.447,-284.83,-333.676,-333.676,-194.944,-321.39,-332.472 0|0:391:15,1,6,102,17,21,0,125,11,25:15:593:1,6,102,17,21,0,125,11,25:36,227,3912,638,815,0,4812,380,930:-662.519,-664.098,-712.598,-648.429,-694.293,-695.424,-346.226,-392.091,-376.422,-364.323,-616.668,-662.533,-646.864,-344.661,-660.353,-600.076,-645.94,-630.272,-328.069,-598.511,-642.556,-667.035,-712.899,-697.231,-395.028,-665.47,-648.878,-715.837,-272.008,-317.873,-302.204,0,-270.444,-253.851,-320.811,-283.182,-636.18,-682.044,-666.376,-364.173,-634.615,-618.023,-684.982,-289.956,-681.67,-590.931,-636.796,-621.127,-318.924,-589.366,-572.774,-639.733,-244.707,-608.878,-632.207 0|0:345:13,0,0,63,9,4,61,132,12,0:13:514:0,0,63,9,4,61,132,12,0:0,0,2424,314,134,2381,5141,446,0:-575.279,-579.192,-621.492,-579.192,-621.492,-621.492,-380.197,-422.497,-422.497,-403.533,-555.459,-597.759,-597.759,-398.764,-595.05,-568.346,-610.646,-610.646,-411.652,-586.913,-609.442,-383.502,-425.803,-425.803,-226.807,-402.07,-414.957,-407.44,-156.697,-198.997,-198.997,0,-175.265,-188.152,-3.30421,-159.261,-542.704,-585.004,-585.004,-386.01,-561.271,-574.158,-389.315,-162.509,-581.392,-579.192,-621.492,-621.492,-422.497,-597.759,-610.646,-425.803,-198.997,-585.004,-621.492 0|0:446:12,0,11,83,9,0,45,188,11,12:12:475:0,11,83,9,0,45,188,11,12:0,434,3216,336,0,1781,7323,435,456:-823.296,-826.908,-866.003,-791.198,-830.294,-826.982,-562.727,-601.823,-566.113,-576.837,-801.179,-840.274,-804.564,-576.094,-837.565,-826.908,-866.003,-830.294,-601.823,-840.274,-866.003,-680.381,-719.477,-683.767,-455.295,-693.748,-719.477,-705.93,-225.089,-264.185,-228.475,0,-238.456,-264.185,-117.655,-207.591,-791.109,-830.204,-794.494,-566.023,-804.475,-830.204,-683.677,-228.385,-826.893,-789.514,-828.609,-792.9,-564.429,-802.88,-828.609,-682.083,-226.791,-792.81,-824.997 dDocent_Contig_6623 9 . G C 1920.69 . AB=0.212254;ABP=331.672;AC=4;AF=0.333333;AN=12;AO=97;CIGAR=1X;DP=656;DPB=656;DPRA=1.14824;EPP=213.643;EPPR=1216.86;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9982;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.749553;PAO=0;PQA=0;PQR=0;PRO=0;QA=3729;QR=21362;RO=559;RPL=0;RPP=213.643;RPPR=1216.86;RPR=97;RUN=1;SAF=97;SAP=213.643;SAR=0;SRF=559;SRP=1216.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:89:65,24:65:2489:24:926:-56.8642,0,-197.419 0/1:132:106,26:106:4080:26:1010:-51.4742,0,-327.549 0/1:96:75,21:75:2889:21:791:-42.6085,0,-231.281 0/1:140:114,26:114:4332:26:1002:-48.3444,0,-347.81 0/0:110:110,0:110:4180:0:0:0,-33.1133,-376.287 0/0:89:89,0:89:3392:0:0:0,-26.7917,-305.416 dDocent_Contig_6624 12 . T C 1115.39 . AB=0.112565;ABP=1497.17;AC=3;AF=0.25;AN=12;AO=152;CIGAR=1X;DP=2015;DPB=2015;DPRA=1.36809;EPP=333.074;EPPR=4046.29;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.998389;PAO=0;PQA=0;PQR=0;PRO=0;QA=6032;QR=74544;RO=1862;RPL=0;RPP=333.074;RPPR=4046.29;RPR=152;RUN=1;SAF=152;SAP=333.074;SAR=0;SRF=1862;SRP=4046.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:394:346,48:346:13817:48:1894:-52.0604,0,-1123.88 0/1:281:244,37:244:9755:37:1480:-48.8545,0,-792.741 0/0:343:325,18:325:13017:18:704:0,-39.5732,-1106.87 0/1:471:427,44:427:17052:44:1749:-15.8456,0,-1391.51 0/0:257:256,0:256:10331:0:0:0,-77.0637,-928.665 0/0:269:264,5:264:10572:5:205:0,-62.1421,-931.924 dDocent_Contig_6625 9 . G A 689.088 . AB=0.177215;ABP=217.491;AC=2;AF=0.166667;AN=12;AO=42;CIGAR=1X;DP=610;DPB=610;DPRA=1.27078;EPP=94.2121;EPPR=1236.41;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998239;PAO=0;PQA=0;PQR=0;PRO=0;QA=1587;QR=21554;RO=568;RPL=0;RPP=94.2121;RPPR=1236.41;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=568;SRP=1236.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:68:68,0:68:2565:0:0:0,-20.47,-231.047 0/0:74:74,0:74:2815:0:0:0,-22.2762,-253.532 0/0:150:150,0:150:5682:0:0:0,-45.1545,-511.36 0/0:81:81,0:81:3082:0:0:0,-24.3834,-277.543 0/1:125:105,20:105:4012:20:751:-30.2851,0,-323.548 0/1:112:90,22:90:3398:22:836:-41.8455,0,-272.243 dDocent_Contig_6626 98 . N A 52988.3 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=2082;CIGAR=1X;DP=2088;DPB=2088;DPRA=0;EPP=4524.02;EPPR=0;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=58860;QR=0;RO=0;RPL=2082;RPP=4524.02;RPPR=0;RPR=0;RUN=1;SAF=2082;SAP=4524.02;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:502:0,500:0:0:500:14158:-1274.24,-150.515,0 1/1:513:0,513:0:0:513:14690:-1322.17,-154.428,0 1/1:239:0,239:0:0:239:7087:-638.003,-71.9462,0 1/1:386:0,386:0:0:386:10950:-985.615,-116.198,0 1/1:148:0,147:0:0:147:3917:-352.638,-44.2514,0 1/1:300:0,297:0:0:297:8058:-725.32,-89.4059,0 dDocent_Contig_6627 28 . T A 704.592 . AB=0.0861244;ABP=624.924;AC=0;AF=0;AN=12;AO=68;CIGAR=1X3M10I1X;DP=913;DPB=1059;DPRA=0;EPP=150.67;EPPR=1594.7;GTI=0;LEN=1;MEANALT=3.66667;MQM=29.0441;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.0147059;PAIREDR=0.986357;PAO=0;PQA=0;PQR=0;PRO=0;QA=2592;QR=28601;RO=733;RPL=0;RPP=150.67;RPPR=1594.7;RPR=68;RUN=1;SAF=68;SAP=150.67;SAR=0;SRF=733;SRP=1594.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:139:110,15,1,11:110:4295:15,1,11:573,41,444:-3.53226,-0.618668,-349.186,-33.2587,-350.317,-386.066,0,-317.099,-349.763,-349.836 0|0:166:114,16,9,27:114:4391:16,9,27:604,358,1074:-54.1399,-49.6655,-405.34,-58.9782,-380.683,-416.786,0,-321.729,-331.065,-352.412 0|0:113:87,5,6,14:87:3367:5,6,14:193,245,538:-17.9897,-32.9814,-308.027,-23.9513,-289.315,-298.722,0,-265.374,-256.369,-272.372 0|0:193:161,13,4,15:161:6285:13,4,15:496,153,579:0,-19.8152,-532.535,-35.9056,-523.894,-551.376,-0.887497,-488.909,-505.04,-513.079 0|0:137:124,5,5,0:124:4880:5,5,0:191,193,0:0,-30.5496,-430.524,-21.4162,-416.181,-421.509,-37.3277,-432.03,-423.014,-438.863 0|0:165:137,14,3,10:137:5383:14,3,10:535,121,392:0,-12.7379,-451.262,-31.2573,-445.502,-473.154,-8.96939,-423.242,-441.822,-448.787 dDocent_Contig_6628 18 . T C 19552.9 . AB=0.626113;ABP=142.674;AC=6;AF=0.5;AN=12;AO=633;CIGAR=1X;DP=1011;DPB=1011;DPRA=0;EPP=1209.32;EPPR=802.205;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.922591;PAIREDR=0.970745;PAO=0;PQA=0;PQR=0;PRO=0;QA=25234;QR=14927;RO=376;RPL=0;RPP=1377.55;RPPR=819.484;RPR=633;RUN=1;SAF=613;SAP=1209.32;SAR=20;SRF=374;SRP=802.205;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:141:48,93:48:1897:93:3686:-289.309,0,-128.486 0/1:158:31,126:31:1236:126:5002:-402.454,0,-63.8975 0/1:90:30,60:30:1197:60:2336:-183.309,0,-80.9129 0/1:210:97,112:97:3870:112:4512:-342.888,0,-285.19 0/1:213:96,117:96:3782:117:4678:-356.802,0,-276.281 0/1:199:74,125:74:2945:125:5020:-391.751,0,-205.242 dDocent_Contig_6629 9 . G T 375.533 . AB=0.122581;ABP=386.562;AC=1;AF=0.0833333;AN=12;AO=67;CIGAR=1X;DP=1757;DPB=1757;DPRA=1.19745;EPP=148.499;EPPR=3672.8;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2583;QR=64439;RO=1690;RPL=0;RPP=148.499;RPPR=3672.8;RPR=67;RUN=1;SAF=67;SAP=148.499;SAR=0;SRF=1690;SRP=3672.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:217:217,0:217:8255:0:0:0,-65.3235,-742.751 0/0:342:342,0:342:13094:0:0:0,-102.952,-1177.89 0/0:194:194,0:194:7391:0:0:0,-58.3998,-665.036 0/0:346:346,0:346:13250:0:0:0,-104.156,-1191.92 0/0:348:319,29:319:12153:29:1115:0,-4.10706,-992.626 0/1:310:272,38:272:10296:38:1468:-39.0762,0,-832.974 dDocent_Contig_6630 107 . N T 94.7596 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=95;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:30:-2.99957,-0.30103,0 1/1:2:0,2:0:0:2:65:-6.17353,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6631 14 . A G 228.333 . AB=0.121547;ABP=228.184;AC=2;AF=0.166667;AN=12;AO=31;CIGAR=1X;DP=547;DPB=547;DPRA=0;EPP=70.3259;EPPR=1121.32;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.891262;PAO=0;PQA=0;PQR=0;PRO=0;QA=1243;QR=20319;RO=515;RPL=0;RPP=70.3259;RPPR=1121.32;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=515;SRP=1121.32;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:72:62,10:62:2436:10:407:-15.3164,0,-197.726 0/1:109:97,12:97:3802:12:480:-10.7387,0,-309.407 0/0:70:67,2:67:2640:2:77:0,-13.6577,-230.527 0/0:97:96,1:96:3811:1:41:0,-25.1053,-338.913 0/0:93:89,4:89:3534:4:156:0,-13.579,-303.685 0/0:106:104,2:104:4096:2:82:0,-24.1295,-360.855 dDocent_Contig_6632 96 . G C 112.39 . AB=0.127517;ABP=182.572;AC=3;AF=0.25;AN=12;AO=20;CIGAR=1X;DP=196;DPB=196;DPRA=2.76667;EPP=46.4397;EPPR=385.189;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.95;PAIREDR=0.965909;PAO=0;PQA=0;PQR=0;PRO=0;QA=687;QR=5957;RO=176;RPL=20;RPP=46.4397;RPPR=385.189;RPR=0;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=176;SRP=385.189;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:16,1:16:550:1:34:0,-1.7186,-46.4271 0/1:73:62,11:62:2111:11:382:-12.7385,0,-168.284 0/1:19:17,2:17:594:2:68:-0.738361,0,-48.0685 0/1:57:51,6:51:1692:6:203:-1.44294,0,-135.402 0/0:11:11,0:11:357:0:0:0,-3.31133,-32.4446 0/0:19:19,0:19:653:0:0:0,-5.71957,-59.0921 dDocent_Contig_6633 7 . A T 577.508 . AB=0.123506;ABP=621.075;AC=2;AF=0.166667;AN=12;AO=79;CIGAR=1X;DP=1324;DPB=1324;DPRA=1.06132;EPP=174.557;EPPR=2704.32;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2983;QR=47632;RO=1244;RPL=0;RPP=174.557;RPPR=2704.32;RPR=79;RUN=1;SAF=79;SAP=174.557;SAR=0;SRF=1244;SRP=2704.32;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:157:147,10:147:5621:10:360:0,-14.5256,-473.124 0/0:241:233,7:233:8922:7:273:0,-47.4541,-777.808 0/0:200:200,0:200:7685:0:0:0,-60.206,-691.473 0/0:224:224,0:224:8570:0:0:0,-67.4307,-771.064 0/1:199:178,21:178:6811:21:807:-13.0487,0,-552.976 0/1:303:262,41:262:10023:41:1543:-47.924,0,-810.514 dDocent_Contig_6634 42 . C A 1891.7 . AB=0.435065;ABP=8.65049;AC=6;AF=0.5;AN=12;AO=67;CIGAR=1X;DP=154;DPB=154;DPRA=0;EPP=148.499;EPPR=191.928;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.955224;PAIREDR=0.91954;PAO=0;PQA=0;PQR=0;PRO=0;QA=2718;QR=3474;RO=87;RPL=0;RPP=148.499;RPPR=191.928;RPR=67;RUN=1;SAF=67;SAP=148.499;SAR=0;SRF=87;SRP=191.928;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:29:11,18:11:449:18:732:-57.4737,0,-32.036 0/1:22:14,8:14:568:8:323:-22.8159,0,-44.8399 0/1:21:12,9:12:474:9:364:-26.8028,0,-36.6877 0/1:24:14,10:14:556:10:409:-29.9459,0,-43.1548 0/1:26:8,18:8:296:18:727:-57.9285,0,-19.1582 0/1:32:28,4:28:1131:4:163:-5.42547,0,-92.4373 dDocent_Contig_6635 58 . A G 438.825 . AB=0.185185;ABP=119.224;AC=3;AF=0.25;AN=12;AO=30;CIGAR=1X;DP=225;DPB=225;DPRA=2.05;EPP=68.1545;EPPR=424.276;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.886598;PAO=0;PQA=0;PQR=0;PRO=0;QA=1161;QR=7359;RO=194;RPL=30;RPP=68.1545;RPPR=424.276;RPR=0;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=194;SRP=424.276;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:29:24,5:24:854:5:194:-9.10297,0,-68.4294 0/0:52:47,4:47:1732:4:135:0,-3.25312,-143.644 0/1:34:29,5:29:1118:5:203:-8.41804,0,-90.658 0/1:72:57,15:57:2225:15:588:-31.5833,0,-178.763 0/0:18:17,1:17:664:1:41:0,-1.32397,-55.9911 0/0:20:20,0:20:766:0:0:0,-6.0206,-69.2568 dDocent_Contig_6636 22 . C T 2732.2 . AB=0.147943;ABP=1363.79;AC=4;AF=0.333333;AN=12;AO=216;CIGAR=1X;DP=1763;DPB=1763;DPRA=0;EPP=472.048;EPPR=3353.59;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=59.2443;NS=6;NUMALT=1;ODDS=0;PAIRED=0.99537;PAIREDR=0.809462;PAO=0;PQA=0;PQR=0;PRO=0;QA=8381;QR=60389;RO=1543;RPL=0;RPP=472.048;RPPR=3353.59;RPR=216;RUN=1;SAF=216;SAP=472.048;SAR=0;SRF=1543;SRP=3353.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:256:237,17:237:9286:17:608:0,-21.681,-779.908 0/1:349:292,57:292:11407:57:2252:-97.8001,0,-919.661 0/1:201:182,18:182:7158:18:710:-3.89523,0,-580.388 0/1:388:312,76:312:12189:76:2960:-149.718,0,-971.643 0/0:243:231,12:231:9041:12:443:0,-32.9467,-772.796 0/1:326:289,36:289:11308:36:1408:-29.0268,0,-918.367 dDocent_Contig_6637 13 . C T 2191.18 . AB=0.196147;ABP=460.917;AC=5;AF=0.416667;AN=12;AO=119;CIGAR=1X;DP=683;DPB=683;DPRA=0;EPP=261.416;EPPR=1227.72;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.97479;PAIREDR=0.987589;PAO=0;PQA=0;PQR=0;PRO=0;QA=4716;QR=22661;RO=564;RPL=0;RPP=261.416;RPPR=1227.72;RPR=119;RUN=1;SAF=119;SAP=261.416;SAR=0;SRF=564;SRP=1227.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:112:105,7:105:4214:7:286:0,-7.60054,-353.101 0/1:125:104,21:104:4151:21:839:-38.1925,0,-335.925 0/1:75:66,9:66:2652:9:358:-10.0023,0,-216.216 0/1:124:96,28:96:3873:28:1114:-63.2153,0,-311.227 0/1:98:81,17:81:3261:17:662:-30.409,0,-264.041 0/1:149:112,37:112:4510:37:1457:-86.5205,0,-360.963 dDocent_Contig_6638 35 . G C 1258.03 . AB=0.123348;ABP=1121.88;AC=3;AF=0.25;AN=12;AO=140;CIGAR=1X;DP=2180;DPB=2180;DPRA=0.703091;EPP=307.016;EPPR=4430.64;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.978571;PAIREDR=0.991172;PAO=0;PQA=0;PQR=0;PRO=0;QA=5575;QR=81022;RO=2039;RPL=0;RPP=307.016;RPPR=4430.64;RPR=140;RUN=1;SAF=140;SAP=307.016;SAR=0;SRF=2039;SRP=4430.64;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:265:226,39:226:8858:39:1546:-59.5938,0,-716.945 0/0:366:338,28:338:13469:28:1089:0,-11.8917,-1112.94 0/1:219:193,25:193:7670:25:1011:-25.2602,0,-623.869 0/1:424:376,48:376:14939:48:1929:-46.1707,0,-1215.76 0/0:426:426,0:426:16933:0:0:0,-128.239,-1522.61 0/0:480:480,0:480:19153:0:0:0,-144.494,-1722.17 dDocent_Contig_6640 26 . G A 405.857 . AB=0.148571;ABP=190.737;AC=1;AF=0.0833333;AN=12;AO=38;CIGAR=1X;DP=1006;DPB=1006;DPRA=1.57851;EPP=85.5263;EPPR=2105;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.947368;PAIREDR=0.972107;PAO=0;PQA=0;PQR=0;PRO=0;QA=1537;QR=38315;RO=968;RPL=0;RPP=85.5263;RPPR=2105;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=968;SRP=2105;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:150:149,1:149:5905:1:41:0,-41.0599,-527.138 0/0:173:172,1:172:6800:1:41:0,-47.9836,-607.596 0/0:99:99,0:99:3907:0:0:0,-29.802,-351.634 0/0:143:143,0:143:5686:0:0:0,-43.0473,-511.548 0/0:266:256,10:256:10085:10:405:0,-43.2639,-870.222 0/1:175:149,26:149:5932:26:1050:-42.1086,0,-480.977 dDocent_Contig_6641 82 . T A 2503.8 . AB=0.310345;ABP=120.794;AC=6;AF=0.5;AN=12;AO=117;CIGAR=1X;DP=377;DPB=377;DPRA=0;EPP=257.073;EPPR=567.593;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.418803;PAIREDR=0.496154;PAO=0;PQA=0;PQR=0;PRO=0;QA=4146;QR=9296;RO=260;RPL=117;RPP=257.073;RPPR=567.593;RPR=0;RUN=1;SAF=117;SAP=257.073;SAR=0;SRF=260;SRP=567.593;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:64:53,11:53:1896:11:390:-16.1728,0,-151.649 0/1:66:53,13:53:1902:13:468:-22.5912,0,-151.588 0/1:45:26,19:26:899:19:654:-45.6333,0,-67.6718 0/1:86:55,31:55:1982:31:1112:-74.5008,0,-152.763 0/1:56:26,30:26:944:30:1059:-78.76,0,-68.4214 0/1:60:47,13:47:1673:13:463:-23.944,0,-132.792 dDocent_Contig_6642 96 . G T 430.489 . AB=0;ABP=0;AC=4;AF=0.666667;AN=6;AO=9;CIGAR=1X1M4X;DP=14;DPB=14;DPRA=0.9;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=2;ODDS=1.69407e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=302;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:8:0,8,0:0:0:8,0:267,0:-24.3561,-2.40824,0,-24.3561,-2.40824,-24.3561 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:1:0,1,0:0:0:1,0:35,0:-3.49863,-0.30103,0,-3.49863,-0.30103,-3.49863 0|0:5:0,0,5:0:0:0,5:0,160:-14.7154,-14.7154,-14.7154,-1.50515,-1.50515,0 .:.:.:.:.:.:.:. dDocent_Contig_6643 107 . N C 65.5375 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=69;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_6644 68 . G A 53.869 . AB=0.0846561;ABP=286.209;AC=1;AF=0.0833333;AN=12;AO=21;CIGAR=1X2M1X6M;DP=1082;DPB=1081;DPRA=1.17151;EPP=48.6112;EPPR=2039.85;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.971215;PAO=0;PQA=0;PQR=0;PRO=0;QA=817;QR=30930;RO=938;RPL=21;RPP=48.6112;RPPR=2039.85;RPR=0;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=938;SRP=2039.85;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:163:129,0,10,16:129:4287:0,10,16:0,235,522:-3.34179,-42.1747,-389.087,-24.0617,-370.955,-367.945,0,-346.941,-328.809,-342.124 0|0:227:199,0,0,14:199:6502:0,0,14:0,0,474:0,-59.905,-585.022,-59.905,-585.022,-585.022,-21.4533,-546.59,-546.59,-542.375 0|0:156:139,0,0,10:139:4647:0,0,10:0,0,342:0,-41.8432,-418.106,-41.8432,-418.106,-418.106,-14.0628,-390.347,-390.347,-387.337 0|0:214:196,5,0,8:196:6460:5,0,8:193,0,272:0,-43.1302,-563.876,-59.0019,-565.381,-581.233,-36.9298,-543.317,-559.169,-556.76 0|0:133:122,0,0,6:122:4001:0,0,6:0,0,204:0,-36.7257,-360.025,-36.7257,-360.025,-360.025,-20.1173,-343.477,-343.477,-341.671 0|1:189:153,16,0,17:153:5033:16,0,17:624,0,568:-5.26363,0,-401.966,-51.3212,-406.783,-458.08,-5.35347,-360.798,-412.095,-406.978 dDocent_Contig_6645 59 . A G 3294.79 . AB=0.319512;ABP=119.02;AC=6;AF=0.5;AN=12;AO=131;CIGAR=1X;DP=410;DPB=410;DPRA=0;EPP=287.473;EPPR=608.851;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.824427;PAIREDR=0.863799;PAO=0;PQA=0;PQR=0;PRO=0;QA=5121;QR=10940;RO=279;RPL=131;RPP=287.473;RPPR=608.851;RPR=0;RUN=1;SAF=131;SAP=287.473;SAR=0;SRF=279;SRP=608.851;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:63:46,17:46:1803:17:660:-40.7604,0,-143.518 0/1:97:65,32:65:2510:32:1278:-86.086,0,-196.843 0/1:54:36,18:36:1431:18:701:-47.1519,0,-112.792 0/1:78:40,38:40:1548:38:1442:-106.549,0,-116.078 0/1:36:33,3:33:1323:3:123:-0.627708,0,-108.497 0/1:82:59,23:59:2325:23:917:-58.1505,0,-184.731 dDocent_Contig_6646 114 . T C 3178.95 . AB=0.0776699;ABP=322.153;AC=0;AF=0;AN=12;AO=16;CIGAR=1X2M1X;DP=406;DPB=406;DPRA=0;EPP=37.7539;EPPR=558.907;GTI=0;LEN=1;MEANALT=2.66667;MQM=59;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.8125;PAIREDR=0.832031;PAO=0;PQA=0;PQR=0;PRO=0;QA=605;QR=8571;RO=256;RPL=0;RPP=37.7539;RPPR=558.907;RPR=16;RUN=1;SAF=0;SAP=37.7539;SAR=16;SRF=0;SRP=558.907;SRR=256;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:73:47,2,23:47:1569:2,23:74,870:-57.1912,-65.3423,-191.727,0,-120.996,-120.072 0|0:63:47,0,16:47:1563:0,16:0,598:-35.1889,-49.3373,-175.783,0,-126.809,-121.992 0|0:43:25,0,18:25:837:0,18:0,689:-49.3983,-56.9241,-124.677,0,-68.1155,-62.6969 0|0:66:30,12,23:30:1008:12,23:455,869:-62.2124,-33.9298,-111.961,0,-44.3234,-74.7228 0|0:67:49,2,16:49:1654:2,16:76,596:-34.024,-42.5406,-175.972,0,-127.784,-129.202 0|0:94:58,0,35:58:1940:0,35:0,1321:-91.1018,-108.562,-265.626,0,-157.346,-146.81 dDocent_Contig_6647 98 . N A 24152.5 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=798;CIGAR=1X;DP=799;DPB=799;DPRA=0;EPP=1735.85;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.822055;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=26815;QR=0;RO=0;RPL=798;RPP=1735.85;RPPR=0;RPR=0;RUN=1;SAF=798;SAP=1735.85;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:61:0,61:0:0:61:2010:-181.162,-18.3628,0 1/1:100:0,100:0:0:100:3307:-297.852,-30.103,0 1/1:98:0,98:0:0:98:3291:-296.414,-29.5009,0 1/1:98:0,98:0:0:98:3294:-296.688,-29.5009,0 1/1:216:0,216:0:0:216:7245:-652.152,-65.0225,0 1/1:226:0,225:0:0:225:7668:-690.133,-67.7318,0 dDocent_Contig_6648 16 . G A 94.4736 . AB=0.10241;ABP=230.936;AC=2;AF=0.166667;AN=12;AO=31;CIGAR=1X;DP=528;DPB=528;DPRA=0;EPP=70.3259;EPPR=1082.23;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.225806;PAIREDR=0.839034;PAO=0;PQA=0;PQR=0;PRO=0;QA=1248;QR=19805;RO=497;RPL=0;RPP=70.3259;RPPR=1082.23;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=497;SRP=1082.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:56:55,1:55:2207:1:38:0,-13.0604,-195.001 0/0:91:85,6:85:3368:6:241:0,-5.32743,-281.113 0/1:74:65,9:65:2606:9:365:-10.9388,0,-212.387 0/0:109:104,5:104:4153:5:201:0,-14.3418,-355.271 0/0:106:104,2:104:4138:2:81:0,-24.2234,-364.693 0/1:92:84,8:84:3333:8:322:-1.65301,0,-272.328 dDocent_Contig_6649 7 . A C 827.893 . AB=0.182156;ABP=239.055;AC=3;AF=0.25;AN=12;AO=57;CIGAR=1X;DP=585;DPB=585;DPRA=0.90625;EPP=118.251;EPPR=970.083;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.982456;PAIREDR=0.925856;PAO=0;PQA=0;PQR=0;PRO=0;QA=2177;QR=19994;RO=526;RPL=0;RPP=126.784;RPPR=1145.2;RPR=57;RUN=1;SAF=56;SAP=118.251;SAR=1;SRF=505;SRP=970.083;SRR=21;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:75:51,24:51:1940:24:909:-59.5472,0,-152.268 0/0:108:100,8:100:3808:8:312:0,-4.06632,-314.388 0/1:96:87,9:87:3288:9:339:-1.96255,0,-267.168 0/1:98:81,16:81:3102:16:617:-26.4022,0,-249.88 0/0:100:99,0:99:3748:0:0:0,-29.802,-337.334 0/0:108:108,0:108:4108:0:0:0,-32.5112,-369.815 dDocent_Contig_6650 53 . A G 9066.84 . AB=0.0533708;ABP=1236.65;AC=0;AF=0;AN=12;AO=38;CIGAR=1M1D10M1X8M1X;DP=1255;DPB=1242.73;DPRA=0;EPP=85.5263;EPPR=1499.15;GTI=0;LEN=1;MEANALT=9;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=1;PAIREDR=0.98984;PAO=0;PQA=0;PQR=0;PRO=0;QA=1425;QR=26457;RO=689;RPL=38;RPP=85.5263;RPPR=1499.15;RPR=0;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=689;SRP=1499.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:205:123,1,2,10,5,61:123:4693:1,2,10,5,61:41,76,397,176,2413:-161.571,-195.213,-579.908,-192.365,-573.976,-576.758,-165.913,-547.525,-544.676,-547.899,-184.272,-565.881,-563.033,-536.582,-567.761,0,-381.637,-378.789,-352.337,-370.695,-366.659 0|0:230:142,8,21,15,0,32:142:5488:8,21,15,0,32:297,781,562,0,1243:-59.3858,-77.8315,-526.176,-38.2249,-464.677,-482.656,-56.1069,-482.56,-442.953,-502.345,-102.132,-528.585,-488.978,-506.86,-552.885,0,-426.459,-386.852,-404.734,-450.759,-441.126 0|0:114:45,6,0,14,6,39:45:1749:6,0,14,6,39:235,0,537,203,1561:-115.065,-109.289,-251.207,-128.611,-253.013,-272.336,-84.5372,-208.938,-228.261,-224.047,-112.159,-236.558,-255.881,-211.807,-254.075,0,-124.412,-143.736,-99.66,-127.282,-131.995 0|0:277:157,3,15,15,12,68:157:6012:3,15,15,12,68:119,568,586,409,2666:-171.983,-209.449,-701.911,-172.685,-656.253,-661.534,-171.068,-654.638,-617.873,-659.918,-186.074,-669.641,-632.876,-631.261,-675.824,0,-483.581,-446.817,-445.201,-460.205,-472.907 0|0:200:120,0,0,67,0,10:120:4617:0,0,67,0,10:0,0,2514,0,408:-169.767,-205.891,-584.949,-205.891,-584.949,-584.949,0,-379.057,-379.057,-358.888,-205.891,-584.949,-584.949,-379.057,-584.949,-172.223,-551.284,-551.284,-345.392,-551.284,-548.274 0|0:229:102,0,0,86,0,39:102:3898:0,0,86,0,39:0,0,3300,0,1525:-240.134,-270.839,-590.662,-270.839,-590.662,-590.662,0,-319.821,-319.821,-293.932,-270.839,-590.662,-590.662,-319.821,-590.662,-145.471,-465.295,-465.295,-194.453,-465.295,-453.555 dDocent_Contig_6651 96 . G A 2037.05 . AB=0.214405;ABP=425.96;AC=6;AF=0.5;AN=12;AO=128;CIGAR=1X;DP=597;DPB=597;DPRA=0;EPP=280.959;EPPR=1019.26;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.898438;PAIREDR=0.912393;PAO=0;PQA=0;PQR=0;PRO=0;QA=4361;QR=15871;RO=468;RPL=128;RPP=280.959;RPPR=1019.26;RPR=0;RUN=1;SAF=128;SAP=280.959;SAR=0;SRF=468;SRP=1019.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:55:47,8:47:1600:8:278:-8.80131,0,-127.734 0/1:107:83,24:83:2787:24:836:-43.3493,0,-218.872 0/1:86:59,27:59:1995:27:911:-56.4116,0,-153.936 0/1:141:114,27:114:3870:27:923:-40.9371,0,-306.071 0/1:93:83,10:83:2835:10:348:-3.6602,0,-227.405 0/1:115:82,32:82:2784:32:1065:-61.7657,0,-216.43 dDocent_Contig_6652 18 . T A 398.126 . AB=0.15528;ABP=169.189;AC=3;AF=0.25;AN=12;AO=26;CIGAR=1X;DP=326;DPB=326;DPRA=1.19792;EPP=59.4686;EPPR=654.452;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1054;QR=12096;RO=300;RPL=0;RPP=59.4686;RPPR=654.452;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=300;SRP=654.452;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:42:42,0:42:1684:0:0:0,-12.6433,-151.784 0/1:85:77,8:77:3116:8:327:-4.21256,0,-254.915 0/1:11:10,1:10:410:1:41:-0.783237,0,-33.9492 0/0:54:54,0:54:2174:0:0:0,-16.2556,-195.823 0/1:65:49,16:49:1973:16:645:-38.8171,0,-158.193 0/0:69:68,1:68:2739:1:41:0,-16.6765,-242.522 dDocent_Contig_6653 16 . G A 3027.38 . AB=0.188714;ABP=1390.06;AC=6;AF=0.5;AN=12;AO=311;CIGAR=2X;DP=1648;DPB=1648;DPRA=0;EPP=678.338;EPPR=2810.72;GTI=0;LEN=1;MEANALT=3.5;MQM=34.6174;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.299035;PAIREDR=0.112916;PAO=0;PQA=0;PQR=0;PRO=0;QA=12266;QR=51221;RO=1293;RPL=0;RPP=678.338;RPPR=2810.72;RPR=311;RUN=1;SAF=311;SAP=678.338;SAR=0;SRF=1293;SRP=2810.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:234:178,49:178:7039:49:1922:-65.0294,0,-564.6 0|1:305:245,57:245:9717:57:2231:-56.4264,0,-782.656 0|1:263:218,34:218:8597:34:1355:-10.1735,0,-697.017 0|1:394:315,72:315:12557:72:2853:-69.0526,0,-1012.36 0|1:233:173,55:173:6849:55:2173:-61.9965,0,-547.095 0|1:219:164,44:164:6462:44:1732:-51.2815,0,-518.408 dDocent_Contig_6654 107 . N A 65.5375 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=69;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6655 98 . N A 86.6791 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=87;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:20:-1.99996,-0.30103,0 1/1:2:0,2:0:0:2:67:-6.36314,-0.60206,0 dDocent_Contig_6656 40 . G A 113.735 . AB=0.294118;ABP=9.26925;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=495;DPB=495;DPRA=0.177824;EPP=13.8677;EPPR=1067.03;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=196;QR=19369;RO=490;RPL=0;RPP=13.8677;RPPR=1067.03;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=490;SRP=1067.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:89:89,0:89:3482:0:0:0,-26.7917,-313.435 0/0:181:181,0:181:7174:0:0:0,-54.4864,-645.334 0/0:70:70,0:70:2794:0:0:0,-21.0721,-251.575 0/0:115:115,0:115:4574:0:0:0,-34.6184,-411.579 0/0:23:23,0:23:889:0:0:0,-6.92369,-80.3155 0/1:17:12,5:12:456:5:196:-12.8964,0,-36.2651 dDocent_Contig_6657 12 . A T 105.65 . AB=0.1375;ABP=94.3207;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X3M2X;DP=702;DPB=702;DPRA=0.887352;EPP=39.9253;EPPR=1455.73;GTI=0;LEN=1;MEANALT=2.25;MQM=40.5882;MQMR=59.9013;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.899851;PAO=0;PQA=0;PQR=0;PRO=0;QA=686;QR=26373;RO=669;RPL=0;RPP=39.9253;RPPR=1455.73;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=669;SRP=1455.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:57:56,1,0:56:2216:1,0:40,0:0,-13.3711,-195.838,-16.8577,-196.139,-199.246 0|0:157:152,4,0:152:5974:4,0:161,0:0,-33.3011,-523.43,-45.7566,-524.634,-537.112 0|1:80:68,11,0:68:2673:11,0:445,0:-12.0879,0,-216.519,-32.5579,-219.831,-252.427 0|0:155:148,1,3:148:5857:1,3:40,116:0,-41.4474,-523.164,-35.031,-513.937,-516.142 0|0:108:102,0,6:102:4002:0,6:0,232:0,-30.7051,-359.823,-11.2658,-340.771,-338.965 0|0:145:143,0,0:143:5651:0,0:0,0:0,-43.0473,-505.839,-43.0473,-505.839,-505.839 dDocent_Contig_6658 46 . A T 936.367 . AB=0.318966;ABP=36.0317;AC=3;AF=0.25;AN=12;AO=37;CIGAR=1X;DP=233;DPB=233;DPRA=0.991453;EPP=83.3548;EPPR=428.619;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1475;QR=7819;RO=196;RPL=0;RPP=83.3548;RPPR=428.619;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=196;SRP=428.619;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:44:39,5:39:1577:5:204:-5.49871,0,-128.917 0/1:58:31,27:31:1243:27:1086:-80.5685,0,-94.6777 0/1:14:9,5:9:360:5:185:-12.7913,0,-28.5485 0/0:49:49,0:49:1945:0:0:0,-14.7505,-175.254 0/0:47:47,0:47:1861:0:0:0,-14.1484,-167.699 0/0:21:21,0:21:833:0:0:0,-6.32163,-75.278 dDocent_Contig_6659 25 . G T 583.352 . AB=0.0497238;ABP=321.761;AC=0;AF=0;AN=12;AO=10;CIGAR=1M1X1M;DP=456;DPB=478.667;DPRA=0.504405;EPP=24.725;EPPR=893.314;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.995122;PAO=0;PQA=0;PQR=0;PRO=0;QA=397;QR=15525;RO=410;RPL=0;RPP=24.725;RPPR=893.314;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=410;SRP=893.314;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:48:45,0,1:45:1677:0,1:0,40:0,-13.5463,-150.98,-10.1481,-147.684,-147.383 0|0:52:41,10,1:41:1535:10,1:400,39:-20.6162,0,-122.665,-29.7535,-122.469,-155.123 0|0:58:42,9,7:42:1552:9,7:312,279:-12.6794,0,-124.195,-2.32404,-103.924,-127.165 0|0:71:55,15,1:55:2065:15,1:571,39:-30.2611,0,-164.612,-43.6113,-165.921,-212.448 0|0:96:96,0,0:96:3671:0,0:0,0:0,-28.8989,-330.48,-28.8989,-330.48,-330.48 0|0:131:131,0,0:131:5025:0,0:0,0:0,-39.4349,-452.242,-39.4349,-452.242,-452.242 dDocent_Contig_6661 1 . N G 76.8682 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6662 98 . N A 10567.5 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=346;CIGAR=1X;DP=346;DPB=346;DPRA=0;EPP=754.34;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=11724;QR=0;RO=0;RPL=346;RPP=754.34;RPPR=0;RPR=0;RUN=1;SAF=346;SAP=754.34;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:129:0,129:0:0:129:4389:-395.212,-38.8329,0 1/1:67:0,67:0:0:67:2298:-207.087,-20.169,0 1/1:77:0,77:0:0:77:2578:-232.277,-23.1793,0 1/1:73:0,73:0:0:73:2459:-221.571,-21.9752,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6663 35 . G A 71.7484 . AB=0.210526;ABP=16.8392;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X2M11I2M;DP=184;DPB=192.8;DPRA=0.575758;EPP=11.6962;EPPR=393.875;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.505556;PAO=0;PQA=0;PQR=0;PRO=0;QA=156;QR=6947;RO=180;RPL=0;RPP=11.6962;RPPR=393.875;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=180;SRP=393.875;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:30:30,0:30:1150:0:0:0,-9.0309,-103.796 0|0:32:32,0:32:1230:0:0:0,-9.63296,-110.99 0|1:19:15,4:15:563:4:156:-8.69772,0,-45.2846 0|0:32:32,0:32:1238:0:0:0,-9.63296,-111.707 0|0:38:38,0:38:1482:0:0:0,-11.4391,-133.648 0|0:33:33,0:33:1284:0:0:0,-9.93399,-115.844 dDocent_Contig_6664 90 . G T 50.22 . AB=0.133333;ABP=55.5599;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=404;DPB=404;DPRA=0.626741;EPP=16.0391;EPPR=867.256;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=216;QR=13940;RO=398;RPL=6;RPP=16.0391;RPPR=867.256;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=398;SRP=867.256;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:45:39,6:39:1386:6:216:-6.24384,0,-111.49 0/0:92:92,0:92:3207:0:0:0,-27.6948,-288.857 0/0:64:64,0:64:2199:0:0:0,-19.2659,-198.165 0/0:100:100,0:100:3527:0:0:0,-30.103,-317.634 0/0:43:43,0:43:1508:0:0:0,-12.9443,-136.011 0/0:60:60,0:60:2113:0:0:0,-18.0618,-190.435 dDocent_Contig_6665 36 . C A 155.342 . AB=0.158537;ABP=86.0559;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1X;DP=263;DPB=263;DPRA=1.30286;EPP=52.9542;EPPR=521.992;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=872;QR=9401;RO=239;RPL=0;RPP=52.9542;RPPR=521.992;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=239;SRP=521.992;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:37,2:37:1457:2:81:0,-4.05444,-123.703 0/0:45:42,3:42:1654:3:119:0,-2.45134,-137.997 0/0:62:57,5:57:2224:5:196:0,-0.649825,-182.335 0/1:36:31,4:31:1220:4:151:-3.01504,0,-99.1344 0/0:35:35,0:35:1376:0:0:0,-10.536,-124.105 0/1:46:37,9:37:1470:9:325:-15.7339,0,-118.707 dDocent_Contig_6666 19 . C A 42991.5 . AB=0.705226;ABP=724.059;AC=6;AF=0.5;AN=12;AO=1390;CIGAR=1X;DP=1971;DPB=1971;DPRA=0;EPP=3021.36;EPPR=1262.46;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999281;PAIREDR=0.989655;PAO=0;PQA=0;PQR=0;PRO=0;QA=54520;QR=23141;RO=580;RPL=0;RPP=3021.36;RPPR=1262.46;RPR=1390;RUN=1;SAF=1390;SAP=3021.36;SAR=0;SRF=580;SRP=1262.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:315:78,237:78:3090:237:9260:-738.069,0,-183.354 0/1:454:121,332:121:4850:332:13096:-1040.96,0,-299.617 0/1:315:78,237:78:3135:237:9302:-741.835,0,-187.39 0/1:463:174,289:174:6984:289:11287:-875.745,0,-488.844 0/1:194:40,154:40:1602:154:6060:-486.799,0,-86.0147 0/1:230:89,141:89:3480:141:5515:-426.964,0,-244.006 dDocent_Contig_6667 37 . C T 321.846 . AB=0.169643;ABP=109.18;AC=2;AF=0.166667;AN=12;AO=21;CIGAR=1X;DP=278;DPB=278;DPRA=1.224;EPP=48.6112;EPPR=561.079;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.486381;PAO=0;PQA=0;PQR=0;PRO=0;QA=838;QR=10265;RO=257;RPL=0;RPP=48.6112;RPPR=561.079;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=257;SRP=561.079;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:57:45,12:45:1804:12:478:-26.2105,0,-145.413 0/1:55:48,7:48:1911:7:282:-9.19594,0,-155.628 0/0:41:39,2:39:1578:2:78:0,-4.93893,-134.848 0/0:52:52,0:52:2066:0:0:0,-15.6536,-186.118 0/0:48:48,0:48:1902:0:0:0,-14.4494,-171.383 0/0:25:25,0:25:1004:0:0:0,-7.52575,-90.6551 dDocent_Contig_6668 135 . C T 1793.42 . AB=0.274627;ABP=150.807;AC=3;AF=0.25;AN=12;AO=92;CIGAR=1X;DP=670;DPB=670;DPRA=1;EPP=202.786;EPPR=1258.12;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3161;QR=20010;RO=578;RPL=0;RPP=202.786;RPPR=1258.12;RPR=92;RUN=1;SAF=0;SAP=202.786;SAR=92;SRF=0;SRP=1258.12;SRR=578;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:125:94,31:94:3254:31:1050:-57.1724,0,-255.445 0/1:180:124,56:124:4293:56:1936:-120.33,0,-332.363 0/0:107:107,0:107:3775:0:0:0,-32.2102,-339.95 0/1:30:25,5:25:840:5:175:-7.06225,0,-66.8737 0/0:130:130,0:130:4480:0:0:0,-39.1339,-403.376 0/0:98:98,0:98:3368:0:0:0,-29.5009,-303.335 dDocent_Contig_6669 25 . A C 45.7641 . AB=0.092437;ABP=346.395;AC=2;AF=0.166667;AN=12;AO=33;CIGAR=1X;DP=650;DPB=650;DPRA=1.52918;EPP=74.6689;EPPR=1338.47;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998374;PAO=0;PQA=0;PQR=0;PRO=0;QA=1325;QR=24190;RO=615;RPL=0;RPP=74.6689;RPPR=1338.47;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=615;SRP=1338.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1537:0:0:0,-12.3422,-138.574 0/0:155:143,11:143:5632:11:450:0,-5.91223,-465.865 0/1:100:90,9:90:3610:9:364:-3.00196,0,-294.814 0/1:138:125,13:125:4889:13:511:-4.78902,0,-398.385 0/0:89:89,0:89:3531:0:0:0,-26.7917,-317.839 0/0:127:127,0:127:4991:0:0:0,-38.2308,-449.1 dDocent_Contig_6670 77 . A G 35.4611 . AB=0.142857;ABP=34.0313;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=242;DPB=242;DPRA=0.654206;EPP=11.6962;EPPR=519.821;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=146;QR=8463;RO=238;RPL=4;RPP=11.6962;RPPR=519.821;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=238;SRP=519.821;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:40,0:40:1356:0:0:0,-12.0412,-122.328 0/0:56:56,0:56:1979:0:0:0,-16.8577,-178.385 0/1:28:24,4:24:867:4:146:-5.06887,0,-69.9206 0/0:43:43,0:43:1575:0:0:0,-12.9443,-142.037 0/0:45:45,0:45:1602:0:0:0,-13.5463,-144.463 0/0:30:30,0:30:1084:0:0:0,-9.0309,-97.8685 dDocent_Contig_6671 17 . A G 293.539 . AB=0.142857;ABP=165.871;AC=1;AF=0.0833333;AN=12;AO=33;CIGAR=1X;DP=652;DPB=652;DPRA=1.55031;EPP=74.6689;EPPR=1347.15;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996769;PAO=0;PQA=0;PQR=0;PRO=0;QA=1305;QR=23480;RO=619;RPL=0;RPP=74.6689;RPPR=1347.15;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=619;SRP=1347.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:147:126,21:126:4725:21:828:-30.5758,0,-381.031 0/0:154:148,6:148:5610:6:233:0,-25.0209,-483.53 0/0:66:62,4:62:2353:4:163:0,-4.80955,-196.908 0/0:126:124,2:124:4690:2:81:0,-30.244,-414.453 0/0:107:107,0:107:4114:0:0:0,-32.2102,-370.32 0/0:52:52,0:52:1988:0:0:0,-15.6536,-179.149 dDocent_Contig_6672 26 . T C 9371.63 . AB=0.271296;ABP=637.697;AC=5;AF=0.416667;AN=12;AO=401;CIGAR=1X;DP=1710;DPB=1710;DPRA=0;EPP=873.771;EPPR=2845.47;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0.997506;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=16078;QR=52046;RO=1309;RPL=0;RPP=873.771;RPPR=2845.47;RPR=401;RUN=1;SAF=401;SAP=873.771;SAR=0;SRF=1309;SRP=2845.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:234:159,75:159:6294:75:3011:-200.629,0,-495.773 0/1:279:197,82:197:7800:82:3293:-212.423,0,-617.612 0/1:313:218,95:218:8668:95:3772:-245.249,0,-685.398 0/1:273:201,72:201:8034:72:2877:-176.844,0,-640.443 0/0:313:291,22:291:11536:22:894:0,-13.4563,-956.692 0/1:298:243,55:243:9714:55:2231:-111.24,0,-783.933 dDocent_Contig_6673 76 . T G 7151.49 . AB=0.179281;ABP=2115.99;AC=4;AF=0.333333;AN=12;AO=488;CIGAR=1M2I2M2X;DP=3807;DPB=3999.4;DPRA=0;EPP=1062.69;EPPR=7062.47;GTI=0;LEN=1;MEANALT=5.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=18281;QR=123250;RO=3251;RPL=488;RPP=1062.69;RPPR=7062.47;RPR=0;RUN=1;SAF=488;SAP=1062.69;SAR=0;SRF=3251;SRP=7062.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:598:457,115:457:16895:115:4223:-207.646,0,-1347.28 0|1:605:500,102:500:18741:102:3708:-152.344,0,-1504.3 0|1:529:412,115:412:15640:115:4406:-237.555,0,-1247.82 0|1:633:538,92:538:20506:92:3495:-124.825,0,-1654.49 0|0:766:732,6:732:28038:6:229:0,-201.559,-2500.68 0|0:676:612,58:612:23430:58:2220:0,-1.92872,-1907.24 dDocent_Contig_6674 23 . G A 258.636 . AB=0.237288;ABP=38.3795;AC=1;AF=0.0833333;AN=12;AO=23;CIGAR=1X;DP=350;DPB=350;DPRA=1.53623;EPP=52.9542;EPPR=713.082;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.565217;PAIREDR=0.455657;PAO=0;PQA=0;PQR=0;PRO=0;QA=843;QR=12492;RO=327;RPL=0;RPP=52.9542;RPPR=713.082;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=327;SRP=713.082;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:53,1:53:2021:1:39:0,-12.3591,-178.222 0/0:99:91,8:91:3494:8:306:0,-1.90112,-286.685 0/0:49:49,0:49:1846:0:0:0,-14.7505,-166.38 0/1:59:45,14:45:1717:14:498:-27.3864,0,-137.021 0/0:44:44,0:44:1697:0:0:0,-13.2453,-152.99 0/0:45:45,0:45:1717:0:0:0,-13.5463,-154.786 dDocent_Contig_6675 20 . T C 48997.7 . AB=0.73823;ABP=1050.04;AC=6;AF=0.5;AN=12;AO=1568;CIGAR=1X;DP=2124;DPB=2124;DPRA=0;EPP=3407.88;EPPR=1206.01;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998195;PAO=0;PQA=0;PQR=0;PRO=0;QA=61711;QR=22048;RO=554;RPL=0;RPP=3407.88;RPPR=1206.01;RPR=1568;RUN=1;SAF=1568;SAP=3407.88;SAR=0;SRF=554;SRP=1206.01;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:264:79,185:79:3101:185:7308:-577.918,0,-199.702 0/1:356:75,281:75:2984:281:11133:-894.079,0,-161.487 0/1:391:105,286:105:4172:286:11345:-902.583,0,-257.746 0/1:304:113,189:113:4506:189:7489:-582.332,0,-314.141 0/1:417:91,326:91:3636:326:12749:-1021.01,0,-201.725 0/1:392:91,301:91:3649:301:11687:-933.064,0,-210.417 dDocent_Contig_6676 82 . A G 3566.95 . AB=0.25;ABP=328.731;AC=3;AF=0.25;AN=12;AO=171;CIGAR=1M1X;DP=1147;DPB=1176.5;DPRA=0;EPP=374.332;EPPR=1989.91;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6638;QR=35232;RO=915;RPL=171;RPP=374.332;RPPR=1989.91;RPR=0;RUN=1;SAF=171;SAP=374.332;SAR=0;SRF=915;SRP=1989.91;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:159:151,0,7:151:5694:0,7:0,256:0,-45.4555,-512.078,-24.532,-491.16,-489.053 0|0:206:199,2,5:199:7488:2,5:76,190:0,-53.6721,-666.577,-44.3235,-651.598,-656.325 0|0:182:172,0,9:172:6701:0,9:0,353:0,-51.7772,-602.474,-22.7637,-573.445,-570.735 0|1:194:172,0,22:172:6732:0,22:0,876:-20.7523,-72.5295,-626,0,-553.867,-547.245 0|1:215:88,41,86:88:3391:41,86:1615,3318:-245.947,-139.58,-405.646,0,-145.545,-252.514 0|1:191:133,16,42:133:5226:16,42:610,1645:-95.2177,-85.2227,-510.226,0,-379.796,-417.186 dDocent_Contig_6677 94 . A C 591.589 . AB=0.238411;ABP=92.7597;AC=4;AF=0.333333;AN=12;AO=36;CIGAR=1X2M1X;DP=185;DPB=185;DPRA=2.22059;EPP=81.1833;EPPR=326.56;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1211;QR=5042;RO=149;RPL=36;RPP=81.1833;RPPR=326.56;RPR=0;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=149;SRP=326.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:15:10,5:10:342:5:173:-11.3948,0,-26.5956 0|1:27:16,11:16:551:11:362:-24.7713,0,-41.7885 0|1:73:57,16:57:1922:16:554:-28.2127,0,-151.283 0|0:15:15,0:15:505:0:0:0,-4.51545,-45.771 0|1:36:32,4:32:1073:4:122:-0.444097,0,-86.0359 0|0:19:19,0:19:649:0:0:0,-5.71957,-58.7315 dDocent_Contig_6678 41 . G A 1621.17 . AB=0.269531;ABP=121.118;AC=5;AF=0.416667;AN=12;AO=71;CIGAR=1X;DP=318;DPB=318;DPRA=0;EPP=157.185;EPPR=539.364;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.971831;PAIREDR=0.975709;PAO=0;PQA=0;PQR=0;PRO=0;QA=2822;QR=9776;RO=247;RPL=0;RPP=157.185;RPPR=539.364;RPR=71;RUN=1;SAF=71;SAP=157.185;SAR=0;SRF=247;SRP=539.364;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:31,10:31:1216:10:384:-22.5655,0,-97.3755 0/0:62:60,2:60:2385:2:81:0,-10.9781,-207.128 0/1:40:35,5:35:1393:5:200:-6.33834,0,-113.588 0/1:43:34,9:34:1345:9:363:-20.0906,0,-108.375 0/1:69:35,34:35:1388:34:1353:-101.265,0,-104.407 0/1:63:52,11:52:2049:11:441:-21.0795,0,-165.643 dDocent_Contig_6680 98 . N A 282.705 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=11;CIGAR=1X;DP=13;DPB=13;DPRA=0;EPP=26.8965;EPPR=0;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=2.1684e-19;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=299;QR=0;RO=0;RPL=11;RPP=26.8965;RPPR=0;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,1:0:0:1:7:-0.629998,-0.30103,0 1/1:6:0,6:0:0:6:176:-16.1283,-1.80618,0 1/1:2:0,2:0:0:2:64:-6.07869,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:3:0,2:0:0:2:52:-4.80563,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_6681 9 . C A 101938 . AB=0.0689358;ABP=3749.06;AC=6;AF=0.5;AN=12;AO=160;CIGAR=1X2M1X4M;DP=4430;DPB=4430;DPRA=0;EPP=308.374;EPPR=960.63;GTI=0;LEN=1;MEANALT=9;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0.95625;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6092;QR=17039;RO=441;RPL=0;RPP=350.446;RPPR=960.63;RPR=160;RUN=1;SAF=155;SAP=308.374;SAR=5;SRF=441;SRP=960.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:710:58,147,0,36,463:58:2243:147,0,36,463:5669,0,1455,18365:-1775.46,-1327.41,-1467.4,-1792.92,-1511.65,-1977.16,-1672.97,-1391.69,-1857.2,-1846.37,-281.272,0,-465.507,-345.55,-326.131 1|0:717:71,137,37,24,445:71:2749:137,37,24,445:5328,1412,965,17648:-1643.23,-1226.76,-1411.34,-1548.77,-1336.75,-1763.45,-1585.08,-1373.06,-1695.06,-1803.67,-212.023,0,-322.007,-358.317,-303.886 1|0:573:31,167,0,45,328:31:1203:167,0,45,328:6454,0,1816,13011:-1492.83,-972.088,-1020.66,-1502.16,-1070.93,-1601,-1352.46,-921.234,-1451.3,-1437.76,-431.221,0,-530.065,-380.365,-431.327 1|0:723:77,186,49,16,387:77:2933:186,49,16,387:7149,1897,629,15159:-1569.45,-1005.76,-1190.34,-1436.8,-1090.51,-1662.62,-1540.89,-1194.6,-1625.64,-1776.65,-346.298,0,-431.041,-535.134,-470.368 1|0:826:116,202,0,46,458:116:4496:202,0,46,458:7805,0,1852,18205:-1735.46,-1129.37,-1437.92,-1770.38,-1498.73,-2139.75,-1617.74,-1346.09,-1987.11,-1973.26,-271.653,0,-641.017,-488.376,-503.145 1|0:881:88,163,74,3,547:88:3415:163,74,3,547:6246,2783,121,21666:-1988.62,-1502.52,-1734.04,-1787.11,-1555.11,-2045.42,-2005.14,-1773.13,-2057.72,-2284.82,-232.003,0,-284.591,-502.616,-347.927 dDocent_Contig_6682 17 . A T 92.3375 . AB=0.2;ABP=26.4622;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=182;DPB=182;DPRA=0.821705;EPP=18.2106;EPPR=383.018;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.434286;PAO=0;PQA=0;PQR=0;PRO=0;QA=255;QR=6903;RO=175;RPL=0;RPP=18.2106;RPPR=383.018;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=175;SRP=383.018;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:22,1:22:864:1:39:0,-3.02713,-74.1761 0/0:37:37,0:37:1462:0:0:0,-11.1381,-131.834 0/0:21:21,0:21:850:0:0:0,-6.32163,-76.8114 0/1:30:24,6:24:936:6:216:-10.7566,0,-75.5108 0/0:37:37,0:37:1451:0:0:0,-11.1381,-130.837 0/0:34:34,0:34:1340:0:0:0,-10.235,-120.865 dDocent_Contig_6683 43 . T G 152.372 . AB=0.0952381;ABP=600.682;AC=1;AF=0.0833333;AN=12;AO=48;CIGAR=1X;DP=3764;DPB=3764;DPRA=0.473767;EPP=107.241;EPPR=8063.52;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999731;PAO=0;PQA=0;PQR=0;PRO=0;QA=1900;QR=147016;RO=3712;RPL=0;RPP=107.241;RPPR=8063.52;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=3712;SRP=8063.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:443:443,0:443:17441:0:0:0,-133.356,-1568.37 0/0:556:554,1:554:21962:1:41:0,-163.382,-1970.67 0/0:234:227,7:227:9075:7:274:0,-45.4129,-791.18 0/1:420:378,40:378:14991:40:1585:-16.7601,0,-1221.93 0/0:1123:1123,0:1123:44364:0:0:0,-338.057,-3988.7 0/0:988:987,0:987:39183:0:0:0,-297.117,-3522.46 dDocent_Contig_6684 27 . T A 68.1895 . AB=0.0992366;ABP=185.762;AC=1;AF=0.0833333;AN=12;AO=21;CIGAR=1X;DP=852;DPB=852;DPRA=1.03341;EPP=48.6112;EPPR=1803.16;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=841;QR=31612;RO=829;RPL=0;RPP=48.6112;RPPR=1803.16;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=829;SRP=1803.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:142:135,7:135:5124:7:273:0,-17.8099,-436.22 0/0:160:159,1:159:6026:1:41:0,-44.0702,-538.167 0/1:131:118,13:118:4519:13:527:-8.34183,0,-367.316 0/0:142:142,0:142:5431:0:0:0,-42.7463,-488.755 0/0:160:158,0:158:6010:0:0:0,-47.5627,-540.499 0/0:117:117,0:117:4502:0:0:0,-35.2205,-405.214 dDocent_Contig_6685 18 . C A 416.274 . AB=0.19469;ABP=94.5004;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=1X;DP=361;DPB=361;DPRA=1.94536;EPP=57.2971;EPPR=732.625;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.982143;PAO=0;PQA=0;PQR=0;PRO=0;QA=974;QR=13238;RO=336;RPL=0;RPP=57.2971;RPPR=732.625;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=336;SRP=732.625;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:32,0:32:1253:0:0:0,-9.63296,-113.038 0/0:65:62,3:62:2380:3:120:0,-8.37964,-203.175 0/1:113:91,22:91:3618:22:854:-43.1503,0,-291.641 0/0:69:69,0:69:2733:0:0:0,-20.7711,-246.097 0/0:36:36,0:36:1432:0:0:0,-10.8371,-129.133 0/0:46:46,0:46:1822:0:0:0,-13.8474,-164.199 dDocent_Contig_6686 38 . G A 160.387 . AB=0.183673;ABP=45.5977;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=391;DPB=391;DPRA=1.80513;EPP=42.0968;EPPR=812.97;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.903485;PAO=0;PQA=0;PQR=0;PRO=0;QA=707;QR=14605;RO=373;RPL=0;RPP=42.0968;RPPR=812.97;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=373;SRP=812.97;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:75:74,1:74:2861:1:41:0,-18.4827,-253.525 0/0:79:77,2:77:3040:2:72:0,-16.9461,-266.864 0/0:66:65,1:65:2550:1:35:0,-16.3693,-226.143 0/1:49:40,9:40:1577:9:355:-17.5615,0,-127.422 0/0:39:39,0:39:1532:0:0:0,-11.7402,-138.132 0/0:83:78,5:78:3045:5:204:0,-6.24146,-255.414 dDocent_Contig_6687 98 . N T 386.676 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=12;CIGAR=1X;DP=12;DPB=12;DPRA=0;EPP=29.068;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=413;QR=0;RO=0;RPL=12;RPP=29.068;RPPR=0;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:9:0,9:0:0:9:309:-28.143,-2.70927,0 ./.:.:.:.:.:.:.:. dDocent_Contig_6688 98 . N T 129.887 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=125;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:1:0,1:0:0:1:20:-1.99996,-0.30103,0 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:42:-3.9887,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_6689 32 . A G 1381.26 . AB=0.175926;ABP=397.092;AC=3;AF=0.25;AN=12;AO=77;CIGAR=1X;DP=1327;DPB=1327;DPRA=0.785853;EPP=170.214;EPPR=2715.18;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3069;QR=49671;RO=1249;RPL=0;RPP=170.214;RPPR=2715.18;RPR=77;RUN=1;SAF=77;SAP=170.214;SAR=0;SRF=1249;SRP=2715.18;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:66:50,16:50:2009:16:649:-38.8751,0,-161.133 0/0:61:61,0:61:2424:0:0:0,-18.3628,-218.315 0/1:90:80,10:80:3218:10:393:-8.63239,0,-262.587 0/1:276:226,50:226:8919:50:1986:-95.8407,0,-719.14 0/0:455:454,0:454:18045:0:0:0,-136.668,-1622.52 0/0:379:378,1:378:15056:1:41:0,-109.996,-1349.82 dDocent_Contig_6690 110 . T A 1173.47 . AB=0.290698;ABP=68.4575;AC=6;AF=0.5;AN=12;AO=50;CIGAR=2X;DP=172;DPB=172;DPRA=0;EPP=111.584;EPPR=263.587;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.74;PAIREDR=0.791667;PAO=0;PQA=0;PQR=0;PRO=0;QA=1982;QR=4718;RO=120;RPL=0;RPP=111.584;RPPR=263.587;RPR=50;RUN=1;SAF=0;SAP=111.584;SAR=50;SRF=0;SRP=263.587;SRR=120;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:34:27,6:27:1058:6:233:-10.9971,0,-85.1686 0|1:19:16,3:16:641:3:122:-5.65292,0,-52.3068 0|1:28:20,8:20:782:8:323:-21.0099,0,-62.2705 0|1:30:18,12:18:714:12:465:-33.1553,0,-55.556 0|1:25:12,12:12:465:12:476:-35.5565,0,-34.5646 0|1:36:27,9:27:1058:9:363:-22.1972,0,-84.6756 dDocent_Contig_6691 187 . A G 8004.34 . AB=0.489144;ABP=3.81178;AC=6;AF=0.5;AN=12;AO=383;CIGAR=1X;DP=783;DPB=783;DPRA=0;EPP=834.684;EPPR=871.599;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997389;PAIREDR=0.9975;PAO=0;PQA=0;PQR=0;PRO=0;QA=11620;QR=15787;RO=400;RPL=383;RPP=834.684;RPPR=871.599;RPR=0;RUN=1;SAF=0;SAP=834.684;SAR=383;SRF=0;SRP=871.599;SRR=400;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:126:66,60:66:2592:60:1854:-129.196,0,-195.485 0/1:142:65,77:65:2535:77:2410:-174.415,0,-185.554 0/1:102:46,56:46:1813:56:1716:-124.003,0,-132.673 0/1:135:65,70:65:2578:70:2120:-150.417,0,-191.518 0/1:148:88,60:88:3503:60:1772:-115.187,0,-270.757 0/1:130:70,60:70:2766:60:1748:-118.44,0,-209.928 dDocent_Contig_6692 27 . G A 1132.92 . AB=0.121111;ABP=1125.24;AC=2;AF=0.166667;AN=12;AO=154;CIGAR=1X;DP=2190;DPB=2190;DPRA=1.552;EPP=337.417;EPPR=4421.96;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.993506;PAIREDR=0.997543;PAO=0;PQA=0;PQR=0;PRO=0;QA=6083;QR=81197;RO=2035;RPL=0;RPP=337.417;RPPR=4421.96;RPR=154;RUN=1;SAF=154;SAP=337.417;SAR=0;SRF=2035;SRP=4421.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:388:348,40:348:13949:40:1569:-24.6466,0,-1137.54 0/0:418:391,27:391:15549:27:1086:0,-27.8054,-1300.18 0/1:512:443,69:443:17693:69:2732:-91.8669,0,-1436.78 0/0:349:336,12:336:13486:12:451:0,-63.9418,-1171.82 0/0:273:267,6:267:10568:6:245:0,-59.7517,-927.999 0/0:250:250,0:250:9952:0:0:0,-75.2575,-895.05 dDocent_Contig_6693 49 . G A 17159.2 . AB=0.305568;ABP=728.356;AC=6;AF=0.5;AN=12;AO=675;CIGAR=1X;DP=2209;DPB=2209;DPRA=0;EPP=1460.08;EPPR=3308.04;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.985185;PAIREDR=0.983051;PAO=0;PQA=0;PQR=0;PRO=0;QA=26582;QR=60469;RO=1534;RPL=1;RPP=1460.08;RPPR=3308.04;RPR=674;RUN=1;SAF=675;SAP=1468.75;SAR=0;SRF=1534;SRP=3334.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:378:310,68:310:12213:68:2665:-126.195,0,-984.582 0/1:441:334,107:334:13096:107:4224:-247.38,0,-1044.96 0/1:222:147,75:147:5830:75:2946:-198.411,0,-457.677 0/1:409:285,124:285:11337:124:4891:-316.987,0,-896.452 0/1:369:242,127:242:9471:127:5042:-342.59,0,-740.789 0/1:390:216,174:216:8522:174:6814:-495.583,0,-649.131 dDocent_Contig_6694 20 . T A 23487.3 . AB=0.719547;ABP=446.378;AC=6;AF=0.5;AN=12;AO=762;CIGAR=1X;DP=1059;DPB=1059;DPRA=0;EPP=1657.67;EPPR=647.938;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.971129;PAIREDR=0.983165;PAO=0;PQA=0;PQR=0;PRO=0;QA=29769;QR=10706;RO=297;RPL=0;RPP=1657.67;RPPR=647.938;RPR=762;RUN=1;SAF=762;SAP=1657.67;SAR=0;SRF=297;SRP=647.938;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:165:57,108:57:2085:108:4210:-329.215,0,-138.226 0/1:210:60,150:60:2145:150:5890:-466.715,0,-130.07 0/1:136:53,83:53:1923:83:3278:-254.157,0,-132.382 0/1:194:47,147:47:1674:147:5742:-458.217,0,-92.5343 0/1:173:38,135:38:1360:135:5267:-421.86,0,-70.6084 0/1:181:42,139:42:1519:139:5382:-429.787,0,-82.5058 dDocent_Contig_6695 98 . N A 1005.6 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=35;CIGAR=1X;DP=35;DPB=35;DPRA=0;EPP=79.0118;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1094;QR=0;RO=0;RPL=35;RPP=79.0118;RPPR=0;RPR=0;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:2:0,2:0:0:2:38:-3.60979,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:24:0,24:0:0:24:794:-71.7657,-7.22472,0 1/1:4:0,4:0:0:4:119:-11.0059,-1.20412,0 1/1:4:0,4:0:0:4:109:-10.0796,-1.20412,0 dDocent_Contig_6696 23 . C T 36505.2 . AB=0.443893;ABP=85.6147;AC=6;AF=0.5;AN=12;AO=1341;CIGAR=4M1X;DP=3021;DPB=3008;DPRA=0;EPP=2914.95;EPPR=3340.56;GTI=0;LEN=1;MEANALT=4.5;MQM=60;MQMR=59.9935;NS=6;NUMALT=2;ODDS=0;PAIRED=0.994034;PAIREDR=0.90501;PAO=0;PQA=0;PQR=0;PRO=0;QA=50354;QR=59700;RO=1537;RPL=0;RPP=2914.95;RPPR=3340.56;RPR=1341;RUN=1;SAF=1341;SAP=2914.95;SAR=0;SRF=1537;SRP=3340.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:459:209,16,220:209:8098:16,220:599,8304:-617.6,-631.461,-1291.88,0,-616.176,-599.003 0|1:496:261,0,222:261:10146:0,222:0,8300:-600.983,-679.552,-1513.24,0,-833.676,-766.847 0|1:568:251,18,273:251:9738:18,273:657,10293:-767.847,-789.738,-1584.34,0,-746.357,-717.843 0|1:476:249,28,184:249:9677:28,184:1059,6777:-479.104,-467.249,-1253.96,0,-708.325,-739.746 0|1:548:323,0,217:323:12534:0,217:0,8237:-578.151,-675.384,-1705.15,0,-1029.76,-964.432 0|1:474:244,2,225:244:9507:2,225:77,8443:-618.059,-685.188,-1465.93,0,-775.033,-713.623 dDocent_Contig_6698 10 . T G 80158.5 . AB=0.738005;ABP=1695.08;AC=6;AF=0.5;AN=12;AO=2538;CIGAR=1X;DP=3439;DPB=3439;DPRA=0;EPP=5514.21;EPPR=1955.16;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=100778;QR=35985;RO=899;RPL=0;RPP=5514.21;RPPR=1955.16;RPR=2538;RUN=1;SAF=2538;SAP=5514.21;SAR=0;SRF=899;SRP=1955.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:382:140,242:140:5636:242:9658:-753.624,0,-392.037 0/1:492:136,356:136:5461:356:14193:-1128.2,0,-343.202 0/1:509:162,347:162:6452:347:13719:-1080.5,0,-427.181 0/1:595:112,483:112:4494:483:19182:-1545.72,0,-225.272 0/1:746:169,575:169:6754:575:22901:-1834.75,0,-383.192 0/1:715:180,535:180:7188:535:21125:-1684.27,0,-431.322 dDocent_Contig_6699 11 . C A 282.43 . AB=0.175258;ABP=91.8616;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=261;DPB=261;DPRA=1.18293;EPP=39.9253;EPPR=524.199;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.7787;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.991803;PAO=0;PQA=0;PQR=0;PRO=0;QA=666;QR=9786;RO=244;RPL=0;RPP=39.9253;RPPR=532.85;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=243;SRP=524.199;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:56:56,0:56:2229:0:0:0,-16.8577,-200.774 0/1:64:53,11:53:2133:11:425:-19.3322,0,-172.874 0/1:33:27,6:27:1091:6:241:-12.1327,0,-88.5414 0/0:61:61,0:61:2464:0:0:0,-18.3628,-221.894 0/0:23:23,0:23:899:0:0:0,-6.92369,-81.218 0/0:24:24,0:24:970:0:0:0,-7.22472,-84.9762 dDocent_Contig_6700 44 . C T 673.352 . AB=0.243697;ABP=70.9099;AC=1;AF=0.0833333;AN=12;AO=41;CIGAR=1X;DP=470;DPB=470;DPRA=1.44792;EPP=92.0407;EPPR=934.572;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997669;PAO=0;PQA=0;PQR=0;PRO=0;QA=1638;QR=17170;RO=429;RPL=0;RPP=92.0407;RPPR=934.572;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=429;SRP=934.572;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:79:73,6:73:2930:6:242:0,-1.62442,-241.639 0/0:80:74,6:74:2934:6:236:0,-2.47103,-242.549 0/0:70:70,0:70:2817:0:0:0,-21.0721,-253.627 0/0:50:50,0:50:2006:0:0:0,-15.0515,-180.731 0/1:119:90,29:90:3598:29:1160:-68.858,0,-288.013 0/0:72:72,0:72:2885:0:0:0,-21.6742,-259.74 dDocent_Contig_6701 1 . N G 76.8682 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6702 15 . A T 77.8983 . AB=0.113636;ABP=117.111;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=252;DPB=252;DPRA=1.09231;EPP=35.5824;EPPR=517.649;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.4;PAIREDR=0.704641;PAO=0;PQA=0;PQR=0;PRO=0;QA=611;QR=9484;RO=237;RPL=0;RPP=35.5824;RPPR=517.649;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=237;SRP=517.649;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:45:43,2:43:1738:2:81:0,-5.86062,-148.951 0/1:59:52,7:52:2074:7:285:-8.26364,0,-169.083 0/1:29:26,3:26:1039:3:123:-2.73492,0,-85.072 0/0:46:44,2:44:1763:2:81:0,-6.16165,-151.197 0/0:39:39,0:39:1568:0:0:0,-11.7402,-141.351 0/0:34:33,1:33:1302:1:41:0,-6.14045,-113.353 dDocent_Contig_6703 29 . T A 22326.7 . AB=0.417406;ABP=109.904;AC=5;AF=0.416667;AN=12;AO=753;CIGAR=2M1X19M;DP=1804;DPB=1782.27;DPRA=0;EPP=1638.13;EPPR=1913.91;GTI=0;LEN=1;MEANALT=6.5;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0.997344;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=29555;QR=34426;RO=880;RPL=0;RPP=1638.13;RPPR=1913.91;RPR=753;RUN=1;SAF=753;SAP=1638.13;SAR=0;SRF=880;SRP=1913.91;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:337:118,0,0,203,0:118:4624:0,0,203,0:0,0,7978,0:-620.652,-656.173,-1036.41,-656.173,-1036.41,-1036.41,0,-380.268,-380.268,-319.159,-656.173,-1036.41,-1036.41,-380.268,-1036.41 0|1:358:156,0,1,194,0:156:6090:0,1,194,0:0,41,7582,0:-576.423,-623.383,-1124,-619.999,-1120.62,-1120.32,0,-500.732,-497.348,-442.332,-623.383,-1124,-1120.62,-500.732,-1124 0|1:218:94,0,0,119,0:94:3664:0,0,119,0:0,0,4660,0:-354.883,-383.18,-684.334,-383.18,-684.334,-684.334,0,-301.183,-301.183,-265.36,-383.18,-684.334,-684.334,-301.183,-684.334 0|1:360:185,0,0,175,0:185:7224:0,0,175,0:0,0,6873,0:-509.94,-565.63,-1159.48,-565.63,-1159.48,-1159.48,0,-594.24,-594.24,-541.56,-565.63,-1159.48,-1159.48,-594.24,-1159.48 0|1:285:213,12,0,43,13:213:8355:12,0,43,13:401,0,1711,523:-76.7871,-108.46,-791.944,-140.906,-795.556,-828.009,0,-654.679,-687.131,-674.187,-97.799,-752.454,-784.906,-644.028,-780.993 0|0:246:114,26,44,19,36:114:4469:26,44,19,36:955,1699,751,1434:-105.204,-61.4589,-421.134,0,-289.443,-354.26,-77.7199,-367.162,-305.706,-439.505,-21.4404,-310.885,-249.429,-327.148,-378.111 dDocent_Contig_6704 29 . G A 3220.02 . AB=0.356941;ABP=65.7615;AC=6;AF=0.5;AN=12;AO=126;CIGAR=1X1M2X;DP=353;DPB=353;DPRA=0;EPP=276.616;EPPR=493.763;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.777778;PAIREDR=0.915929;PAO=0;PQA=0;PQR=0;PRO=0;QA=4862;QR=8819;RO=226;RPL=0;RPP=276.616;RPPR=493.763;RPR=126;RUN=1;SAF=126;SAP=276.616;SAR=0;SRF=226;SRP=493.763;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:70:46,24:46:1766:24:950:-64.7321,0,-138.101 0|1:57:44,13:44:1712:13:491:-27.3676,0,-137.156 0|1:71:35,36:35:1367:36:1393:-104.258,0,-101.916 0|1:54:35,19:35:1374:19:739:-50.5809,0,-107.669 0|1:69:48,20:48:1887:20:755:-47.5223,0,-149.302 0|1:32:18,14:18:713:14:534:-38.7635,0,-54.8656 dDocent_Contig_6705 93 . A T 5420.67 . AB=0.446894;ABP=15.2341;AC=2;AF=0.166667;AN=12;AO=227;CIGAR=1X;DP=1031;DPB=1031;DPRA=1.40326;EPP=495.935;EPPR=1748.87;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7863;QR=27636;RO=804;RPL=227;RPP=495.935;RPPR=1748.87;RPR=0;RUN=1;SAF=227;SAP=495.935;SAR=0;SRF=804;SRP=1748.87;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:103:99,4:99:3410:4:140:0,-18.0612,-294.186 0/0:114:114,0:114:3914:0:0:0,-34.3174,-352.472 0/0:155:155,0:155:5293:0:0:0,-46.6596,-476.534 0/0:160:160,0:160:5445:0:0:0,-48.1648,-490.212 0/1:203:70,133:70:2425:133:4600:-353.083,0,-157.402 0/1:296:206,90:206:7149:90:3123:-192.206,0,-554.408 dDocent_Contig_6706 41 . A G 4208.9 . AB=0.0958512;ABP=994.696;AC=1;AF=0.0833333;AN=12;AO=67;CIGAR=1X2M1X;DP=967;DPB=967;DPRA=0;EPP=148.499;EPPR=1551.27;GTI=0;LEN=1;MEANALT=2.25;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.992987;PAO=0;PQA=0;PQR=0;PRO=0;QA=2525;QR=27713;RO=713;RPL=0;RPP=148.499;RPPR=1551.27;RPR=67;RUN=1;SAF=67;SAP=148.499;SAR=0;SRF=713;SRP=1551.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:137:114,7,16:114:4443:7,16:261,628:-17.3446,-30.3014,-393.356,0,-343.814,-360.363 0|0:127:97,8,22:97:3724:8,22:306,883:-43.5686,-47.6634,-350.889,0,-280.539,-299.026 0|1:270:207,38,24:207:8033:38,24:1431,927:-54.9288,0,-648.511,-41.1188,-583.831,-693.852 0|0:165:116,14,35:116:4523:14,35:527,1383:-78.8904,-70.6341,-438.168,0,-328.584,-361.228 0|0:114:84,0,30:84:3292:0,30:0,1189:-72.9716,-98.2581,-368.948,0,-271.085,-262.054 0|0:154:95,0,59:95:3698:0,59:0,2340:-164.408,-193.006,-496.903,0,-304.291,-286.53 dDocent_Contig_6707 14 . T A 379.155 . AB=0.105263;ABP=80.1547;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X2M1X2M;DP=539;DPB=539;DPRA=0.803922;EPP=29.068;EPPR=1086.58;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.997996;PAO=0;PQA=0;PQR=0;PRO=0;QA=476;QR=19712;RO=499;RPL=0;RPP=29.068;RPPR=1086.58;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=499;SRP=1086.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:57:48,6,0,3:48:1885:6,0,3:243,0,122:-5.58703,0,-153.215,-20.0365,-155.022,-175.06,-9.97624,-144.961,-165,-164.097 0|0:128:120,3,0,4:120:4736:3,0,4:121,0,163:0,-26.1391,-414.93,-36.1236,-415.833,-425.808,-22.6599,-402.39,-412.365,-411.161 0|0:59:57,2,0,0:57:2248:2,0,0:80,0,0:0,-10.169,-194.905,-17.1587,-195.507,-202.097,-17.1587,-195.507,-202.097,-202.097 0|0:84:82,1,0,1:82:3225:1,0,1:32,0,40:0,-22.1459,-287.108,-24.6845,-287.409,-289.987,-21.3506,-284.115,-286.693,-286.392 0|0:102:102,0,0,0:102:4049:0,0,0:0,0,0:0,-30.7051,-364.415,-30.7051,-364.415,-364.415,-30.7051,-364.415,-364.415,-364.415 0|0:109:90,0,19,0:90:3569:0,19,0:0,756,0:-35.5503,-62.643,-356.42,0,-294.174,-288.455,-62.643,-356.42,-294.174,-356.42 dDocent_Contig_6708 70 . T C 261.064 . AB=0.244898;ABP=30.7077;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=437;DPB=437;DPRA=0.856209;EPP=37.7539;EPPR=917.2;GTI=0;LEN=1;MEANALT=1;MQM=52.9375;MQMR=42.4561;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.700713;PAO=0;PQA=0;PQR=0;PRO=0;QA=635;QR=16820;RO=421;RPL=8;RPP=3.0103;RPPR=32.0234;RPR=8;RUN=1;SAF=8;SAP=3.0103;SAR=8;SRF=173;SRP=32.0234;SRR=248;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:87:87,0:87:3447:0:0:0,-26.1896,-237.387 0/0:62:62,0:62:2508:0:0:0,-18.6639,-193.822 0/1:49:37,12:37:1476:12:474:-27.6293,0,-75.3716 0/0:69:69,0:69:2756:0:0:0,-20.7711,-187.086 0/0:88:88,0:88:3526:0:0:0,-26.4906,-255.293 0/0:82:78,4:78:3107:4:161:0,-10.0203,-220.898 dDocent_Contig_6709 162 . T G 799.131 . AB=0.207071;ABP=150.583;AC=4;AF=0.333333;AN=12;AO=41;CIGAR=1X;DP=326;DPB=326;DPRA=0.773438;EPP=67.8897;EPPR=613.225;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1609;QR=11161;RO=285;RPL=38;RPP=67.8897;RPPR=613.225;RPR=3;RUN=1;SAF=0;SAP=92.0407;SAR=41;SRF=0;SRP=621.88;SRR=285;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:45:41,4:41:1622:4:163:-1.51208,0,-132.668 0/1:37:32,5:32:1241:5:192:-6.50963,0,-100.829 0/1:68:42,26:42:1599:26:1016:-71.2608,0,-123.668 0/1:48:42,6:42:1667:6:238:-7.34153,0,-135.812 0/0:42:42,0:42:1670:0:0:0,-12.6433,-150.527 0/0:86:86,0:86:3362:0:0:0,-25.8886,-302.647 dDocent_Contig_6710 32 . G T 395.358 . AB=0.107071;ABP=666.827;AC=1;AF=0.0833333;AN=12;AO=70;CIGAR=1X;DP=2632;DPB=2632;DPRA=1.05947;EPP=155.013;EPPR=5564.15;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2765;QR=101925;RO=2561;RPL=0;RPP=155.013;RPPR=5564.15;RPR=70;RUN=1;SAF=70;SAP=155.013;SAR=0;SRF=2561;SRP=5564.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:355:355,0:355:14152:0:0:0,-106.866,-1272.63 0/0:383:383,0:383:15307:0:0:0,-115.294,-1376.41 0/0:540:539,0:539:21403:0:0:0,-162.255,-1924.07 0/0:381:380,1:380:15151:1:32:0,-111.493,-1359.21 0/1:495:442,53:442:17579:53:2110:-41.0586,0,-1431.71 0/0:478:462,16:462:18333:16:623:0,-87.4943,-1592.08 dDocent_Contig_6711 98 . N T 157.129 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=158;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:20:-1.99996,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:3:0,3:0:0:3:103:-9.60997,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6712 15 . T A 818.059 . AB=0.15;ABP=386.058;AC=4;AF=0.333333;AN=12;AO=54;CIGAR=1X;DP=613;DPB=613;DPRA=0.711462;EPP=120.27;EPPR=1216.86;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.992844;PAO=0;PQA=0;PQR=0;PRO=0;QA=2170;QR=22232;RO=559;RPL=0;RPP=120.27;RPPR=1216.86;RPR=54;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=559;SRP=1216.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:69:63,6:63:2466:6:241:-1.29523,0,-201.318 0/1:127:101,26:101:3998:26:1039:-55.5724,0,-321.585 0/1:70:60,10:60:2411:10:404:-15.648,0,-196.063 0/1:94:82,12:82:3258:12:486:-15.7933,0,-264.988 0/0:113:113,0:113:4502:0:0:0,-34.0164,-405.116 0/0:140:140,0:140:5597:0:0:0,-42.1442,-503.545 dDocent_Contig_6713 43 . T C 82.8306 . AB=0.102857;ABP=242.753;AC=2;AF=0.166667;AN=12;AO=31;CIGAR=1X;DP=702;DPB=702;DPRA=1.05357;EPP=4.76149;EPPR=1401.91;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.419355;PAIREDR=0.991018;PAO=0;PQA=0;PQR=0;PRO=0;QA=1165;QR=23208;RO=668;RPL=0;RPP=70.3259;RPPR=1453.55;RPR=31;RUN=1;SAF=13;SAP=4.76149;SAR=18;SRF=662;SRP=1401.91;SRR=6;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:82:72,10:72:2532:10:376:-9.50237,0,-203.431 0/0:180:175,5:175:6094:5:191:0,-36.6269,-530.968 0/0:72:71,1:71:2477:1:39:0,-17.7776,-219.259 0/0:163:156,7:156:5328:7:251:0,-26.1463,-456.716 0/0:112:111,0:111:3879:0:0:0,-33.4143,-349.196 0/1:93:83,8:83:2898:8:308:-0.546391,0,-233.543 dDocent_Contig_6714 20 . G A 628.037 . AB=0.181319;ABP=163.556;AC=2;AF=0.166667;AN=12;AO=33;CIGAR=1X;DP=820;DPB=820;DPRA=0.570533;EPP=74.6689;EPPR=1711.96;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.1474;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.944091;PAO=0;PQA=0;PQR=0;PRO=0;QA=1335;QR=31299;RO=787;RPL=0;RPP=74.6689;RPPR=1711.96;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=787;SRP=1711.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:116:116,0:116:4637:0:0:0,-34.9195,-417.237 0/0:214:214,0:214:8510:0:0:0,-64.4204,-762.336 0/0:118:118,0:118:4699:0:0:0,-35.5215,-422.186 0/0:190:190,0:190:7552:0:0:0,-57.1957,-672.114 0/1:110:96,14:96:3816:14:570:-18.5287,0,-309.352 0/1:72:53,19:53:2085:19:765:-47.4968,0,-165.605 dDocent_Contig_6715 19 . T A 367.387 . AB=0.148148;ABP=206.244;AC=5;AF=0.416667;AN=12;AO=29;CIGAR=1X2M1D7M;DP=227;DPB=224.364;DPRA=0;EPP=65.983;EPPR=430.79;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.896552;PAIREDR=0.969543;PAO=0;PQA=0;PQR=0;PRO=0;QA=1164;QR=7685;RO=197;RPL=0;RPP=65.983;RPPR=430.79;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=197;SRP=430.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:31:27,4:27:1062:4:156:-5.08427,0,-86.5465 0|0:38:37,1:37:1462:1:41:0,-7.34457,-127.745 0|1:86:72,13:72:2810:13:521:-21.242,0,-227.05 0|1:20:17,3:17:659:3:122:-5.35189,0,-53.6227 0|1:29:24,5:24:927:5:201:-9.74102,0,-75.0065 0|1:23:20,3:20:765:3:123:-4.5411,0,-62.2494 dDocent_Contig_6716 51 . G T 215.821 . AB=0.120879;ABP=230.227;AC=3;AF=0.25;AN=12;AO=25;CIGAR=1X;DP=399;DPB=399;DPRA=0.787097;EPP=57.2971;EPPR=812.97;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.36;PAIREDR=0.455764;PAO=0;PQA=0;PQR=0;PRO=0;QA=1013;QR=14408;RO=373;RPL=25;RPP=57.2971;RPPR=812.97;RPR=0;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=373;SRP=812.97;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:80:71,9:71:2744:9:364:-9.04148,0,-223.021 0/0:62:59,3:59:2287:3:121:0,-7.38366,-194.736 0/1:55:46,8:46:1728:8:324:-13.1666,0,-139.418 0/1:47:42,5:42:1612:5:204:-4.59562,0,-131.177 0/0:67:67,0:67:2625:0:0:0,-20.169,-236.403 0/0:88:88,0:88:3412:0:0:0,-26.4906,-307.154 dDocent_Contig_6717 9 . C T 6247.75 . AB=0.0687023;ABP=1907.96;AC=6;AF=0.5;AN=12;AO=81;CIGAR=2X3M1X;DP=1179;DPB=1178.17;DPRA=0;EPP=178.9;EPPR=1162.58;GTI=0;LEN=1;MEANALT=10.5;MQM=29.1481;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0.0493827;PAIREDR=0.960674;PAO=0;PQA=0;PQR=0;PRO=0;QA=3184;QR=20891;RO=534;RPL=0;RPP=178.9;RPPR=1162.58;RPR=81;RUN=1;SAF=81;SAP=178.9;SAR=0;SRF=534;SRP=1162.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:146:69,9,28,10,12:69:2702:9,28,10,12:279,1113,396,474:-51.5017,-50.9656,-270.459,0,-200.9,-213.777,-49.1475,-250.042,-199.081,-268.339,-33.2686,-234.172,-183.21,-232.354,-251.867 0|1:213:89,11,73,9,13:89:3488:11,73,9,13:380,2822,359,465:-174.727,-172.006,-455.546,0,-257.357,-264.892,-183.6,-440.937,-268.951,-467.739,-164.109,-421.45,-249.462,-433.042,-447.048 0|1:168:80,24,29,19,5:80:3110:24,29,19,5:916,1138,750,191:-57.0749,-7.16788,-255.542,0,-181.619,-246.865,-44.3542,-225.957,-218.787,-294.211,-65.4931,-247.105,-239.933,-284.269,-319.575 0|1:259:113,21,64,27,15:113:4406:21,64,27,15:824,2487,1057,439:-142.739,-109.325,-465.184,0,-294.76,-342.919,-115.395,-410.143,-300.825,-469.439,-143,-437.749,-328.43,-443.811,-500.658 0|1:151:57,19,43,9,7:57:2247:19,43,9,7:662,1694,346,244:-93.8116,-62.2081,-241.393,0,-136.16,-171.97,-92.1138,-228.257,-166.06,-274.304,-91.368,-227.513,-165.315,-257.414,-274.163 0|1:242:126,17,55,7,17:126:4938:17,55,7,17:575,2151,276,614:-116.143,-108.808,-509.791,0,-360.858,-389.562,-139.141,-499.977,-391.187,-543.131,-104.484,-465.326,-356.537,-495.656,-505.47 dDocent_Contig_6718 28 . T C 32563.1 . AB=0.374558;ABP=428.488;AC=6;AF=0.5;AN=12;AO=1166;CIGAR=1X;DP=3113;DPB=3113;DPRA=0;EPP=2534.95;EPPR=4228.7;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997945;PAO=0;PQA=0;PQR=0;PRO=0;QA=46745;QR=78216;RO=1946;RPL=0;RPP=2534.95;RPPR=4228.7;RPR=1166;RUN=1;SAF=1166;SAP=2534.95;SAR=0;SRF=1946;SRP=4228.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:427:286,141:286:11468:141:5642:-379.043,0,-902.745 0/1:553:398,155:398:15994:155:6231:-394.04,0,-1271.68 0/1:405:256,149:256:10302:149:5977:-415.762,0,-804.554 0/1:561:378,183:378:15227:183:7357:-492.853,0,-1200.3 0/1:526:251,275:251:10078:275:11038:-834.304,0,-748.004 0/1:641:377,263:377:15147:263:10500:-751.531,0,-1169.22 dDocent_Contig_6719 209 . N G 77.8076 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6720 16 . T C 50861.6 . AB=0.288595;ABP=1966.87;AC=7;AF=0.583333;AN=12;AO=1460;CIGAR=1X4M;DP=5059;DPB=5059;DPRA=0;EPP=3173.36;EPPR=4773.74;GTI=0;LEN=1;MEANALT=6.66667;MQM=59.9712;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=57894;QR=86625;RO=2197;RPL=0;RPP=3173.36;RPPR=4773.74;RPR=1460;RUN=1;SAF=1460;SAP=3173.36;SAR=0;SRF=2197;SRP=4773.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:706:227,288,168:227:8930:288,168:11305,6653:-861.369,0,-647.84,-382.178,-187.012,-1066.14 1|1:811:226,255,322:226:8864:255,322:10028,12706:-1072.91,-316.123,-968.289,-95.8929,0,-727.89 0|1:482:144,142,193:144:5699:142,193:5577,7723:-592.805,-177.487,-603.763,0,-10.358,-410.927 0|1:889:420,266,183:420:16556:266,183:10490,7327:-736.62,0,-1281.99,-259.485,-758.499,-1566.47 0|1:1026:527,101,391:527:20819:101,391:3970,15467:-1114.12,-946.318,-2629.03,0,-1386.68,-1595.42 0|1:1145:653,282,203:653:25757:282,203:11134,8018:-719.562,0,-2034.25,-256.44,-1459.45,-2314.47 dDocent_Contig_6721 1 . N G 248.928 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0.714286;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=265;QR=0;RO=0;RPL=0;RPP=18.2106;RPPR=0;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:186:-17.094,-1.50515,0 1/1:2:0,2:0:0:2:79:-7.49724,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_6722 14 . C T 689.669 . AB=0.112583;ABP=987.291;AC=2;AF=0.166667;AN=12;AO=137;CIGAR=1X;DP=3674;DPB=3674;DPRA=0.630282;EPP=300.502;EPPR=7681.34;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=59.991;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998869;PAO=0;PQA=0;PQR=0;PRO=0;QA=5390;QR=139978;RO=3536;RPL=0;RPP=300.502;RPPR=7681.34;RPR=137;RUN=1;SAF=137;SAP=300.502;SAR=0;SRF=3536;SRP=7681.34;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:406:368,37:368:14588:37:1451:-8.82298,0,-1188.74 0/0:436:413,23:413:16329:23:915:0,-48.5935,-1385.73 0/1:349:301,48:301:11961:48:1869:-63.3657,0,-970.619 0/0:699:672,27:672:26722:27:1073:0,-113.558,-2305.84 0/0:899:897,2:897:35417:2:82:0,-262.846,-3176.67 0/0:885:885,0:885:34961:0:0:0,-266.412,-3143.41 dDocent_Contig_6723 15 . G A 6156.96 . AB=0.227636;ABP=888.973;AC=3;AF=0.25;AN=12;AO=380;CIGAR=1X;DP=2520;DPB=2520;DPRA=0;EPP=828.17;EPPR=4649.96;GTI=0;LEN=1;MEANALT=1;MQM=38.8395;MQMR=53.264;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999065;PAO=0;PQA=0;PQR=0;PRO=0;QA=15050;QR=84250;RO=2140;RPL=0;RPP=828.17;RPPR=4649.96;RPR=380;RUN=1;SAF=380;SAP=828.17;SAR=0;SRF=2140;SRP=4649.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:449:387,62:387:15123:62:2462:-70.5052,0,-1143.01 0/0:410:399,11:399:15712:11:438:0,-86.5737,-1255.98 0/0:320:300,20:300:11846:20:801:0,-40.8186,-981.896 0/0:415:379,36:379:14946:36:1435:0,-46.7512,-1167.27 0/1:409:291,118:291:11522:118:4700:-267.421,0,-900.32 0/1:517:384,133:384:15101:133:5214:-282.992,0,-1133.84 dDocent_Contig_6724 64 . G C 2416.96 . AB=0.166822;ABP=1037.6;AC=4;AF=0.333333;AN=12;AO=179;CIGAR=1X;DP=1352;DPB=1352;DPRA=1.92294;EPP=391.704;EPPR=2547.98;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9625;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.96587;PAO=0;PQA=0;PQR=0;PRO=0;QA=6342;QR=41296;RO=1172;RPL=179;RPP=391.704;RPPR=2539.3;RPR=0;RUN=1;SAF=179;SAP=391.704;SAR=0;SRF=1171;SRP=2539.3;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:172:127,45:127:4329:45:1549:-87.9193,0,-338.034 0/1:367:325,42:325:11108:42:1473:-22.3853,0,-889.22 0/1:239:210,29:210:7523:29:1050:-22.8646,0,-605.12 0/1:295:232,63:232:8326:63:2270:-115.748,0,-660.499 0/0:146:145,0:145:5255:0:0:0,-43.6493,-472.684 0/0:133:133,0:133:4755:0:0:0,-40.037,-426.366 dDocent_Contig_6725 1 . N G 1749.63 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=63;CIGAR=1X;DP=63;DPB=63;DPRA=0;EPP=139.813;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=33.1111;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.936508;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2510;QR=0;RO=0;RPL=0;RPP=139.813;RPPR=0;RPR=63;RUN=1;SAF=63;SAP=139.813;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:16:0,16:0:0:16:644:-41.2395,-4.81648,0 1/1:16:0,16:0:0:16:648:-44.6124,-4.81648,0 1/1:9:0,9:0:0:9:352:-26.3622,-2.70927,0 1/1:13:0,13:0:0:13:511:-37.8396,-3.91339,0 1/1:7:0,7:0:0:7:273:-17.982,-2.10721,0 1/1:2:0,2:0:0:2:82:-6.14866,-0.60206,0 dDocent_Contig_6726 98 . N A 979.217 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=28;CIGAR=10X4I2M;DP=29;DPB=55.25;DPRA=0;EPP=63.8115;EPPR=0;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0.0714286;PAIREDR=0;PAO=7;PQA=208.5;PQR=7.5;PRO=1;QA=1080;QR=0;RO=0;RPL=0;RPP=63.8115;RPPR=0;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:10:0,9:0:0:9:350:-31.4669,-2.70927,0 1|1:4:0,4:0:0:4:153:-13.793,-1.20412,0 1|1:4:0,4:0:0:4:152:-13.7096,-1.20412,0 1|1:11:0,11:0:0:11:425:-38.253,-3.31133,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_6728 9 . C T 451.513 . AB=0.141732;ABP=286.191;AC=1;AF=0.0833333;AN=12;AO=47;CIGAR=1X;DP=1401;DPB=1401;DPRA=1.19498;EPP=105.07;EPPR=2943.18;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1786;QR=52103;RO=1354;RPL=0;RPP=105.07;RPPR=2943.18;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=1354;SRP=2943.18;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:189:189,0:189:7270:0:0:0,-56.8947,-654.145 0/0:278:278,0:278:10697:0:0:0,-83.6863,-962.32 0/0:116:116,0:116:4500:0:0:0,-34.9195,-405.042 0/0:294:294,0:294:11280:0:0:0,-88.5028,-1014.74 0/0:270:259,11:259:9961:11:421:0,-43.036,-857.889 0/1:254:218,36:218:8395:36:1365:-46.6742,0,-678.844 dDocent_Contig_6729 52 . G A 65.3046 . AB=0.147059;ABP=39.7976;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=293;DPB=293;DPRA=0.944724;EPP=16.0391;EPPR=626.223;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.672474;PAO=0;PQA=0;PQR=0;PRO=0;QA=239;QR=11067;RO=287;RPL=6;RPP=16.0391;RPPR=626.223;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=287;SRP=626.223;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:53:53,0:53:2042:0:0:0,-15.9546,-184.003 0/1:34:29,5:29:1139:5:199:-8.05334,0,-92.5682 0/0:42:42,0:42:1621:0:0:0,-12.6433,-146.145 0/0:60:59,1:59:2261:1:40:0,-14.0661,-199.702 0/0:48:48,0:48:1829:0:0:0,-14.4494,-164.846 0/0:56:56,0:56:2175:0:0:0,-16.8577,-195.961 dDocent_Contig_6730 226 . N G 708.703 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=24;CIGAR=1X;DP=24;DPB=24;DPRA=0;EPP=55.1256;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=56.2083;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=766;QR=0;RO=0;RPL=24;RPP=55.1256;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=55.1256;SAR=24;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:108:-9.9816,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:15:0,15:0:0:15:475:-43.0159,-4.51545,0 1/1:2:0,2:0:0:2:65:-6.17077,-0.60206,0 1/1:3:0,3:0:0:3:118:-11.0027,-0.90309,0 dDocent_Contig_6732 18 . G A 56512.2 . AB=0.455177;ABP=78.3448;AC=6;AF=0.5;AN=12;AO=1965;CIGAR=1X;DP=4317;DPB=4317;DPRA=0;EPP=4269.95;EPPR=5101.63;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998473;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=77419;QR=91954;RO=2348;RPL=0;RPP=4269.95;RPPR=5101.63;RPR=1965;RUN=1;SAF=1965;SAP=4269.95;SAR=0;SRF=2348;SRP=5101.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:722:475,246:475:18575:246:9739:-658.502,0,-1452.9 0/1:904:483,421:483:18869:421:16569:-1217.81,0,-1424.62 0/1:549:345,204:345:13622:204:8043:-558.181,0,-1059.74 0/1:912:600,311:600:23479:311:12100:-813.592,0,-1836.54 0/1:601:192,408:192:7567:408:16068:-1263.92,0,-499.67 0/1:629:253,375:253:9842:375:14900:-1150.44,0,-695.787 dDocent_Contig_6733 98 . N C 208.968 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0.857143;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=212;QR=0;RO=0;RPL=7;RPP=18.2106;RPPR=0;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:42:-3.9887,-0.60206,0 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 dDocent_Contig_6734 32 . G C 5167.66 . AB=0.218525;ABP=768.251;AC=5;AF=0.416667;AN=12;AO=261;CIGAR=1X;DP=1337;DPB=1337;DPRA=0;EPP=569.765;EPPR=2335.17;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.980843;PAIREDR=0.989758;PAO=0;PQA=0;PQR=0;PRO=0;QA=10256;QR=42482;RO=1074;RPL=0;RPP=569.765;RPPR=2335.17;RPR=261;RUN=1;SAF=261;SAP=569.765;SAR=0;SRF=1074;SRP=2335.17;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:225:182,43:182:7138:43:1661:-81.9862,0,-574.385 0/1:186:139,46:139:5553:46:1848:-110.435,0,-443.496 0/1:157:133,23:133:5253:23:881:-32.2192,0,-425.258 0/0:225:207,18:207:8218:18:701:0,-4.32001,-675.772 0/1:269:211,58:211:8339:58:2271:-123.576,0,-669.082 0/1:275:202,73:202:7981:73:2894:-177.771,0,-635.1 dDocent_Contig_6735 25 . A G 146.837 . AB=0.109948;ABP=255.413;AC=2;AF=0.166667;AN=12;AO=39;CIGAR=1X;DP=1285;DPB=1285;DPRA=0;EPP=87.6977;EPPR=2708.66;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.974359;PAIREDR=0.967095;PAO=0;PQA=0;PQR=0;PRO=0;QA=1553;QR=48582;RO=1246;RPL=0;RPP=87.6977;RPPR=2708.66;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=1246;SRP=2708.66;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:74:70,4:70:2648:4:161:0,-7.40094,-223.587 0/1:104:92,12:92:3587:12:475:-11.7895,0,-291.571 0/1:87:78,9:78:3079:9:355:-6.116,0,-251.015 0/0:171:162,9:162:6343:9:365:0,-18.2616,-537.426 0/0:390:386,4:386:15005:4:156:0,-102.986,-1335 0/0:459:458,1:458:17920:1:41:0,-134.078,-1607.39 dDocent_Contig_6736 24 . G A 69092.1 . AB=0.0294957;ABP=2023.91;AC=6;AF=0.5;AN=12;AO=31;CIGAR=1X3M;DP=2634;DPB=2634;DPRA=0;EPP=70.3259;EPPR=482.906;GTI=0;LEN=1;MEANALT=3.33333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1221;QR=8533;RO=221;RPL=0;RPP=70.3259;RPPR=482.906;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=221;SRP=482.906;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:356:41,253,4,58:41:1575:253,4,58:9914,143,2318:-864.507,-61.6576,-114.767,-865.192,-179.272,-993.263,-685.93,0,-803.547,-797.744 1|0:520:68,342,0,106:68:2625:342,0,106:13504,0,4179:-1218.88,-128.225,-240.832,-1239.35,-343.784,-1454.91,-895.57,0,-1111.13,-1079.22 0|1:233:29,165,13,26:29:1131:165,13,26:6501,528,1036:-526.071,0,-43.2858,-491.252,-49.4056,-580.298,-449.493,-7.64676,-498.904,-534.625 1|0:462:59,280,14,108:59:2258:280,14,108:10959,550,4238:-1046.48,-163.23,-264.218,-1019.01,-303.272,-1200.07,-715.74,0,-855.783,-868.506 1|0:528:10,444,0,73:10:397:444,0,73:17414,0,2838:-1629.47,-200.502,-99.5291,-1632.48,-233.186,-1665.17,-1399.31,0,-1431.99,-1410.02 1|0:535:14,348,0,171:14:547:348,0,171:13676,0,6795:-1635.02,-514.427,-454.637,-1639.23,-559.395,-1684.2,-1079.85,0,-1124.82,-1073.35 dDocent_Contig_6737 193 . G C 2174 . AB=0.045417;ABP=2176.64;AC=1;AF=0.0833333;AN=12;AO=55;CIGAR=11M1X;DP=1985;DPB=1970.58;DPRA=0.7823;EPP=122.441;EPPR=3764;GTI=0;LEN=1;MEANALT=5.75;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.999423;PAO=0;PQA=0;PQR=0;PRO=0;QA=2094;QR=68155;RO=1732;RPL=55;RPP=122.441;RPPR=3764;RPR=0;RUN=1;SAF=0;SAP=122.441;SAR=55;SRF=0;SRP=3764;SRR=1732;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:294:223,58,12:223:8791:58,12:2282,431:-120.6,0,-705.826,-152.603,-688.156,-872.248 0|0:325:285,28,5:285:11234:28,5:1086,201:-3.41497,0,-915.795,-72.6432,-907.66,-995.372 0|1:172:139,14,15:139:5452:14,15:527,569:-4.79374,-3.47371,-447.615,0,-405.193,-443.842 0|0:420:334,60,23:334:13113:60,23:2385,893:-95.811,0,-1060.38,-123.002,-1005.08,-1194.51 0|0:396:381,8,0:381:15009:8,0:293,0:0,-90.7269,-1323.14,-114.692,-1325.55,-1349.49 0|0:378:370,3,0:370:14556:3,0:120,0:0,-101.452,-1297.97,-111.381,-1298.88,-1308.76 dDocent_Contig_6738 18 . T C 2516.68 . AB=0.218284;ABP=372.501;AC=5;AF=0.416667;AN=12;AO=117;CIGAR=1X;DP=668;DPB=668;DPRA=0.812121;EPP=257.073;EPPR=1195.15;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4672;QR=22014;RO=549;RPL=0;RPP=257.073;RPPR=1195.15;RPR=117;RUN=1;SAF=117;SAP=257.073;SAR=0;SRF=549;SRP=1195.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:75:41,34:41:1646:34:1362:-100.256,0,-125.792 0/1:100:76,24:76:3019:24:959:-56.5011,0,-241.694 0/1:140:112,26:112:4522:26:1038:-51.8297,0,-365.011 0/1:78:65,13:65:2627:13:521:-23.7553,0,-213.069 0/0:132:132,0:132:5287:0:0:0,-39.736,-475.673 0/1:143:123,20:123:4913:20:792:-28.5486,0,-399.005 dDocent_Contig_6739 39 . G A 3773.47 . AB=0.229508;ABP=313.139;AC=5;AF=0.416666;AN=12;AO=112;CIGAR=1X1M1X2M;DP=488;DPB=488;DPRA=0;EPP=174.324;EPPR=284.695;GTI=0;LEN=1;MEANALT=3.33333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.785714;PAIREDR=0.700405;PAO=0;PQA=0;PQR=0;PRO=0;QA=4359;QR=9388;RO=247;RPL=0;RPP=246.215;RPPR=539.364;RPR=112;RUN=1;SAF=103;SAP=174.324;SAR=9;SRF=213;SRP=284.695;SRR=34;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:97:60,0,27,10:60:2314:0,27,10:0,1053,376:-68.498,-86.5598,-276.572,0,-190.02,-181.893,-55.7598,-245.769,-159.218,-242.759 0|1:92:58,5,19,8:58:2188:5,19,8:182,741,297:-43.4815,-46.0784,-223.882,0,-164.476,-173.619,-36.6413,-201.09,-155.041,-213.544 0|1:88:35,11,26,15:35:1333:11,26,15:416,1016,582:-72.993,-49.4343,-155.456,0,-75.2394,-101.509,-35.7155,-110.953,-61.5206,-140.534 0|1:94:54,10,22,6:54:2036:10,22,6:387,863,239:-54.7196,-39.188,-203.014,0,-135.05,-160.217,-51.2926,-186.342,-147.157,-216.325 0|0:78:21,0,17,40:21:792:0,17,40:0,652,1570:-122.8,-129.121,-194.019,-75.6118,-140.508,-135.39,0,-64.8978,-11.3829,-52.8566 0|1:39:19,10,1,9:19:725:10,1,9:387,34,336:-26.0776,0,-56.4732,-29.0412,-56.7268,-88.2166,-4.29864,-31.9826,-61.0172,-61.0645 dDocent_Contig_6740 13 . G A 20600.1 . AB=0.0500642;ABP=5482.16;AC=0;AF=0;AN=12;AO=156;CIGAR=1X2M1X2M1X2M1X;DP=3116;DPB=3116;DPRA=0;EPP=341.76;EPPR=2630.49;GTI=0;LEN=1;MEANALT=15;MQM=43.8782;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0.987179;PAIREDR=0.961157;PAO=0;PQA=0;PQR=0;PRO=0;QA=6151;QR=47011;RO=1210;RPL=0;RPP=341.76;RPPR=2630.49;RPR=156;RUN=1;SAF=156;SAP=341.76;SAR=0;SRF=1210;SRP=2630.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:389:101,7,138,78,25:101:3916:7,138,78,25:267,5385,3079,989:-412.207,-423.066,-742.672,0,-302.169,-280.172,-189.287,-491.455,-68.3888,-487.521,-361.224,-663.393,-240.327,-429.614,-675.413 0|0:484:184,14,135,78,34:184:7163:14,135,78,34:557,5295,3119,1369:-380.019,-399.655,-984.119,0,-552.925,-548.04,-178.495,-731.421,-331.766,-743.695,-322.581,-875.506,-475.851,-654.348,-901.026 0|0:336:115,2,99,57,19:115:4482:2,99,57,19:81,3866,2281,763:-283.155,-311.153,-678.923,0,-361.749,-338.568,-129.878,-491.63,-180.474,-481.092,-254.903,-616.654,-305.499,-435.38,-617.556 0|0:623:180,19,185,116,46:180:7043:19,185,116,46:753,7156,4666,1806:-533.522,-535.667,-1109.02,0,-527.038,-523.388,-203.171,-730.211,-194.543,-747.332,-439.186,-966.223,-430.557,-633.73,-1004.42 0|0:659:303,79,117,64,44:303:11770:79,117,64,44:3104,4467,2542,1740:-275.206,-133.098,-1076.4,0,-733.77,-931.871,-157.161,-890.931,-757.835,-1104.99,-223.229,-956.998,-823.903,-981.065,-1177.08 0|0:625:327,35,89,72,61:327:12637:35,89,72,61:1389,3474,2865,2420:-187.119,-179.443,-1206.76,0,-931.736,-1011.06,-49.6637,-981.401,-801.959,-1065.84,-86.3597,-1018.1,-838.655,-888.32,-1105.85 dDocent_Contig_6741 30 . T G 2437.28 . AB=0.226027;ABP=383.762;AC=5;AF=0.416667;AN=12;AO=139;CIGAR=1X;DP=695;DPB=695;DPRA=0;EPP=304.845;EPPR=1210.35;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.992806;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5011;QR=20699;RO=556;RPL=0;RPP=304.845;RPPR=1210.35;RPR=139;RUN=1;SAF=139;SAP=304.845;SAR=0;SRF=556;SRP=1210.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:121:86,35:86:3195:35:1272:-78.3485,0,-251.277 0/1:111:88,23:88:3317:23:797:-38.62,0,-265.268 0/1:81:60,21:60:2235:21:766:-44.8686,0,-176.991 0/1:117:98,19:98:3644:19:691:-27.2928,0,-292.871 0/0:111:104,7:104:3851:7:264:0,-9.29433,-322.589 0/1:154:120,34:120:4457:34:1221:-63.8199,0,-354.827 dDocent_Contig_6742 59 . G A 15430.2 . AB=0.0425532;ABP=942.703;AC=0;AF=0;AN=12;AO=22;CIGAR=1X3M2D1M1X;DP=1114;DPB=1108.5;DPRA=0;EPP=50.7827;EPPR=1199.49;GTI=0;LEN=1;MEANALT=2.66667;MQM=33.5455;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=868;QR=20653;RO=551;RPL=22;RPP=50.7827;RPPR=1199.49;RPR=0;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=551;SRP=1199.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:138:83,5,50:83:3093:5,50:192,1984:-138.422,-151.849,-403.508,0,-241.693,-238.204 0|0:233:128,0,101:128:4792:0,101:0,3997:-290.441,-328.973,-721.398,0,-392.455,-362.051 0|0:237:113,6,117:113:4240:6,117:238,4617:-345.92,-365.793,-711.265,0,-333.225,-312.149 0|0:198:77,0,120:77:2883:0,120:0,4690:-362.35,-385.529,-621.617,0,-236.089,-199.965 0|0:142:83,11,47:83:3112:11,47:438,1863:-128.393,-121.831,-373.394,0,-223.358,-240.762 0|0:166:67,0,95:67:2533:0,95:0,3754:-288.719,-308.888,-516.504,0,-207.6,-179.002 dDocent_Contig_6743 16 . C T 1634.11 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=46;CIGAR=2X1M1X3M3I1X1M1X3M1X;DP=46;DPB=55.8571;DPRA=0;EPP=102.898;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1799;QR=0;RO=0;RPL=0;RPP=102.898;RPPR=0;RPR=46;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:18:0,18:0:0:18:695:-62.8801,-5.41854,0 1|1:5:0,5:0:0:5:199:-18.2889,-1.50515,0 .:.:.:.:.:.:.:. 1|1:23:0,23:0:0:23:905:-81.7644,-6.92369,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_6744 25 . C A 638.213 . AB=0.130864;ABP=482.348;AC=3;AF=0.25;AN=12;AO=62;CIGAR=1X;DP=910;DPB=910;DPRA=1.02973;EPP=137.642;EPPR=1842.25;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.983871;PAIREDR=0.976387;PAO=0;PQA=0;PQR=0;PRO=0;QA=2473;QR=33980;RO=847;RPL=0;RPP=137.642;RPPR=1842.25;RPR=62;RUN=1;SAF=62;SAP=137.642;SAR=0;SRF=847;SRP=1842.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:131:114,17:114:4580:17:655:-19.8369,0,-372.678 0/0:167:159,8:159:6308:8:321:0,-21.0141,-538.21 0/1:109:90,19:90:3636:19:769:-36.7168,0,-294.433 0/1:165:148,17:148:5910:17:687:-12.4894,0,-482.009 0/0:148:148,0:148:5967:0:0:0,-44.5524,-536.785 0/0:190:188,1:188:7579:1:41:0,-53.0998,-677.702 dDocent_Contig_6745 9 . C A 11859.5 . AB=0.244435;ABP=1277.18;AC=4;AF=0.333333;AN=12;AO=604;CIGAR=1X;DP=3077;DPB=3077;DPRA=0;EPP=1314.58;EPPR=5373.06;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9891;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997978;PAO=0;PQA=0;PQR=0;PRO=0;QA=22830;QR=95051;RO=2473;RPL=0;RPP=1314.58;RPPR=5373.06;RPR=604;RUN=1;SAF=604;SAP=1314.58;SAR=0;SRF=2473;SRP=5373.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:474:372,102:372:14313:102:3884:-206.976,0,-1144.74 0/1:561:386,175:386:14855:175:6597:-424.787,0,-1167.35 0/1:714:563,151:563:21634:151:5702:-298.223,0,-1730.86 0/1:497:376,121:376:14497:121:4586:-263.187,0,-1154.41 0/0:365:348,17:348:13330:17:644:0,-51.5823,-1140.8 0/0:466:428,38:428:16422:38:1417:0,-12.4723,-1349.35 dDocent_Contig_6746 59 . T C 65095.1 . AB=0.747842;ABP=1486.24;AC=6;AF=0.5;AN=12;AO=2079;CIGAR=1X;DP=2780;DPB=2780;DPRA=0;EPP=4517.5;EPPR=1525.21;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999519;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=81816;QR=27766;RO=701;RPL=2079;RPP=4517.5;RPPR=1525.21;RPR=0;RUN=1;SAF=2079;SAP=4517.5;SAR=0;SRF=701;SRP=1525.21;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:444:87,357:87:3439:357:13922:-1118.35,0,-175.904 0/1:501:151,350:151:6006:350:13772:-1087.65,0,-389.523 0/1:351:75,276:75:2950:276:10982:-881.979,0,-159.943 0/1:471:82,389:82:3254:389:15353:-1238.85,0,-151.153 0/1:536:139,397:139:5540:397:15552:-1237.16,0,-337.079 0/1:477:167,310:167:6577:310:12235:-956.73,0,-448.085 dDocent_Contig_6747 27 . G A 1830.77 . AB=0.170111;ABP=597.576;AC=6;AF=0.5;AN=12;AO=107;CIGAR=1X;DP=629;DPB=629;DPRA=0;EPP=235.358;EPPR=1136.52;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.934579;PAIREDR=0.950192;PAO=0;PQA=0;PQR=0;PRO=0;QA=4241;QR=20627;RO=522;RPL=0;RPP=235.358;RPPR=1136.52;RPR=107;RUN=1;SAF=107;SAP=235.358;SAR=0;SRF=522;SRP=1136.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:102:89,13:89:3483:13:517:-16.1724,0,-282.818 0/1:124:112,12:112:4482:12:472:-5.50266,0,-365.982 0/1:95:80,15:80:3190:15:609:-26.5497,0,-258.565 0/1:101:88,13:88:3502:13:514:-16.1985,0,-284.819 0/1:118:86,32:86:3358:32:1272:-79.2275,0,-266.767 0/1:89:67,22:67:2612:22:857:-50.6482,0,-208.427 dDocent_Contig_6748 41 . G A 326.056 . AB=0.148571;ABP=190.737;AC=4;AF=0.333333;AN=12;AO=29;CIGAR=1X;DP=274;DPB=274;DPRA=0;EPP=57.5966;EPPR=535.021;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.517241;PAIREDR=0.604082;PAO=0;PQA=0;PQR=0;PRO=0;QA=1125;QR=9750;RO=245;RPL=1;RPP=57.5966;RPPR=535.021;RPR=28;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=245;SRP=535.021;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:57:55,2:55:2191:2:81:0,-9.47298,-189.677 0/1:44:33,11:33:1329:11:434:-26.1686,0,-106.626 0/1:33:30,3:30:1185:3:120:-1.25332,0,-96.9888 0/1:49:42,7:42:1647:7:263:-9.27184,0,-133.704 0/1:49:44,5:44:1748:5:186:-2.34348,0,-142.789 0/0:42:41,1:41:1650:1:41:0,-8.54869,-144.627 dDocent_Contig_6749 16 . T A 102668 . AB=0.801456;ABP=1629.05;AC=8;AF=0.666667;AN=12;AO=3199;CIGAR=1X2M;DP=3718;DPB=3718;DPRA=0;EPP=6949.55;EPPR=941.262;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.22045e-16;PAIRED=0.998437;PAIREDR=0.804054;PAO=0;PQA=0;PQR=0;PRO=0;QA=123862;QR=17433;RO=444;RPL=0;RPP=6949.55;RPPR=967.144;RPR=3199;RUN=1;SAF=3199;SAP=6949.55;SAR=0;SRF=441;SRP=941.262;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:439:71,0,367:71:2777:0,367:0,14041:-1130.78,-1152.15,-1380.47,0,-228.371,-117.893 0|1:550:112,0,437:112:4411:0,437:0,16825:-1347.6,-1381.32,-1744.2,0,-362.865,-231.315 0|1:479:100,3,376:100:3924:3,376:117,14551:-1165.03,-1185.52,-1507.32,0,-313.088,-209.518 0|1:592:89,32,471:89:3497:32,471:1261,18324:-1478.96,-1402,-1679.99,0,-183.879,-145.838 1|1:908:34,0,840:34:1345:0,840:0,32566:-2807.17,-2817.4,-2928.09,-142.171,-252.865,0 1|1:750:38,0,708:38:1479:0,708:0,27555:-2344.53,-2355.97,-2477.51,-91.5808,-213.129,0 dDocent_Contig_6750 40 . A C 321.559 . AB=0.0996678;ABP=841.026;AC=1;AF=0.0833333;AN=12;AO=60;CIGAR=1X;DP=3763;DPB=3763;DPRA=0.95223;EPP=133.299;EPPR=8030.94;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99973;PAO=0;PQA=0;PQR=0;PRO=0;QA=2384;QR=146265;RO=3697;RPL=0;RPP=133.299;RPPR=8030.94;RPR=60;RUN=1;SAF=60;SAP=133.299;SAR=0;SRF=3697;SRP=8030.94;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:482:482,0:482:19009:0:0:0,-145.096,-1709.33 0/1:602:540,60:540:21355:60:2384:-33.6788,0,-1739.21 0/0:465:464,0:464:18406:0:0:0,-139.678,-1655 0/0:456:456,0:456:18127:0:0:0,-137.27,-1630 0/0:855:853,0:853:33799:0:0:0,-256.779,-3038.67 0/0:903:902,0:902:35569:0:0:0,-271.529,-3197.67 dDocent_Contig_6751 3 . T C 168.599 . AB=0;ABP=0;AC=2;AF=0.2;AN=10;AO=6;CIGAR=1X1M1X;DP=22;DPB=22;DPRA=1.8;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=6.66667;MQMR=0;NS=5;NUMALT=3;ODDS=4.33681e-19;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=202;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:2:0,0,2,0:0:0:0,2,0:0,39,0:-3.4648,-3.4648,-3.4648,-0.60206,-0.60206,0,-3.4648,-3.4648,-0.60206,-3.4648 0|0:7:0,3,4,0:0:0:3,4,0:101,107,0:-8.9573,-8.2304,-7.32731,-1.20412,-0.335678,0,-8.9573,-8.2304,-1.20412,-8.9573 1|1:5:0,3,2,0:0:0:3,2,0:101,10,0:-1.9135,-0.90309,0,-2.03989,-0.985088,-1.43783,-1.9135,-0.90309,-2.03989,-1.9135 0|0:5:0,0,4,0:0:0:0,4,0:0,20,0:-0.98538,-0.98538,-0.98538,-1.20412,-1.20412,0,-0.98538,-0.98538,-1.20412,-0.98538 .:.:.:.:.:.:.:. 0|0:3:0,0,0,3:0:0:0,0,3:0,0,15:-0.766407,-0.766407,-0.766407,-0.766407,-0.766407,-0.766407,-0.90309,-0.90309,-0.90309,0 dDocent_Contig_6752 10 . C T 5184.34 . AB=0.240466;ABP=555.31;AC=6;AF=0.5;AN=12;AO=227;CIGAR=1X;DP=944;DPB=944;DPRA=0;EPP=309.513;EPPR=1559.96;GTI=0;LEN=1;MEANALT=1;MQM=59.8238;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.665198;PAIREDR=0.701534;PAO=0;PQA=0;PQR=0;PRO=0;QA=9027;QR=28944;RO=717;RPL=0;RPP=495.935;RPPR=1559.96;RPR=227;RUN=1;SAF=203;SAP=309.513;SAR=24;SRF=717;SRP=1559.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:124:99,25:99:3963:25:988:-51.894,0,-319.325 0/1:214:155,59:155:6266:59:2336:-145.952,0,-499.226 0/1:129:102,27:102:4098:27:1097:-60.1803,0,-329.941 0/1:138:114,24:114:4624:24:943:-43.5966,0,-374.51 0/1:164:120,44:120:4837:44:1744:-107.804,0,-385.833 0/1:175:127,48:127:5156:48:1919:-120.23,0,-411.186 dDocent_Contig_6753 107 . N T 400.107 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=16;CIGAR=1X;DP=17;DPB=17;DPRA=0;EPP=37.7539;EPPR=0;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=424;QR=0;RO=0;RPL=0;RPP=37.7539;RPPR=0;RPR=16;RUN=1;SAF=0;SAP=37.7539;SAR=16;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:10:-0.999996,-0.30103,0 1/1:8:0,8:0:0:8:202:-18.4277,-2.40824,0 1/1:4:0,4:0:0:4:111:-10.264,-1.20412,0 1/1:3:0,2:0:0:2:66:-6.11168,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_6754 23 . C A 2557.87 . AB=0.262019;ABP=207.651;AC=6;AF=0.5;AN=12;AO=109;CIGAR=1X;DP=416;DPB=416;DPRA=0;EPP=239.701;EPPR=667.481;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4316;QR=12294;RO=306;RPL=0;RPP=239.701;RPPR=667.481;RPR=109;RUN=1;SAF=109;SAP=239.701;SAR=0;SRF=306;SRP=667.481;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:68:60,7:60:2396:7:278:-4.81349,0,-195.212 0/1:90:79,11:79:3182:11:437:-12.5909,0,-259.347 0/1:37:34,3:34:1379:3:120:-0.0495804,0,-113.224 0/1:66:53,13:53:2127:13:510:-26.3762,0,-171.74 0/1:83:55,28:55:2204:28:1108:-75.0177,0,-173.54 0/1:72:25,47:25:1006:47:1863:-146.209,0,-69.1619 dDocent_Contig_6755 11 . G A 51685.6 . AB=0.0708138;ABP=4092.48;AC=0;AF=0;AN=12;AO=181;CIGAR=1X1M1X2M2D16M;DP=3063;DPB=2925.96;DPRA=0;EPP=396.047;EPPR=771.712;GTI=0;LEN=1;MEANALT=19.2;MQM=60;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7077;QR=13622;RO=354;RPL=0;RPP=396.047;RPPR=771.712;RPR=181;RUN=1;SAF=181;SAP=396.047;SAR=0;SRF=354;SRP=771.712;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:507:15,0,128,255,37,0,33,11,0,8:15:565:0,128,255,37,0,33,11,0,8:0,4957,9928,1362,0,1267,446,0,285:-1172.3,-1176.81,-1223.11,-769.619,-815.915,-777.383,-360.907,-407.204,0,-330.441,-1065.47,-1111.77,-704.575,-295.864,-1100.63,-1176.81,-1223.11,-815.915,-407.204,-1111.77,-1223.11,-1072.83,-1119.12,-711.931,-303.219,-1007.78,-1119.12,-1109.19,-1140.03,-1186.33,-779.135,-370.424,-1074.99,-1186.33,-1082.34,-1183.02,-1176.81,-1223.11,-815.915,-407.204,-1111.77,-1223.11,-1119.12,-1186.33,-1223.11,-1153.6,-1199.89,-792.699,-383.988,-1088.55,-1199.89,-1095.91,-1163.11,-1199.89,-1197.48 0|0:668:11,69,227,167,43,41,87,2,0,0:11:422:69,227,167,43,41,87,2,0,0:2689,8759,6528,1572,1519,3401,81,0,0:-1218.01,-1000.31,-1014.18,-502.054,-315.683,-468.358,-684.632,-498.261,0,-668.998,-1092.9,-906.531,-408.272,-590.85,-1114.59,-1097.06,-910.687,-412.428,-595.006,-1003.28,-1119.35,-941.733,-755.363,-257.103,-439.681,-847.951,-852.107,-950.181,-1214.64,-1028.27,-530.012,-712.59,-1120.86,-1125.02,-969.692,-1248.68,-1221.32,-1034.95,-536.692,-719.27,-1127.54,-1131.69,-976.371,-1249.28,-1255.96,-1221.32,-1034.95,-536.692,-719.27,-1127.54,-1131.69,-976.371,-1249.28,-1255.96,-1255.96 0|0:486:10,18,225,146,56,0,18,3,0,0:10:375:18,225,146,56,0,18,3,0,0:711,8753,5686,2137,0,697,120,0,0:-1152.87,-1097.37,-1122.67,-436.594,-408.802,-399.577,-688.579,-660.787,0,-675.343,-980.581,-952.79,-292.009,-543.994,-994.439,-1155.88,-1128.09,-467.309,-719.294,-1011.3,-1186.6,-1098.63,-1070.84,-410.059,-662.044,-954.047,-1129.35,-1123.93,-1146,-1118.21,-457.424,-709.409,-1001.41,-1176.71,-1119.46,-1175.81,-1155.88,-1128.09,-467.309,-719.294,-1011.3,-1186.6,-1129.35,-1176.71,-1186.6,-1155.88,-1128.09,-467.309,-719.294,-1011.3,-1186.6,-1129.35,-1176.71,-1186.6,-1186.6 0|0:552:25,14,199,217,18,23,41,2,0,0:25:956:14,199,217,18,23,41,2,0,0:555,7715,8423,668,857,1554,68,0,0:-1239.88,-1201.72,-1275.94,-613.605,-646.359,-632.139,-555.368,-588.122,0,-568.483,-1192.75,-1225.5,-637.39,-579.153,-1265.77,-1177.26,-1210.02,-621.902,-563.664,-1201.05,-1248.78,-1120.03,-1152.78,-564.666,-506.429,-1143.81,-1128.32,-1186.12,-1241.89,-1274.65,-686.531,-628.294,-1265.68,-1250.19,-1192.95,-1319.73,-1247.4,-1280.16,-692.044,-633.807,-1271.19,-1255.7,-1198.47,-1320.33,-1325.84,-1247.4,-1280.16,-692.044,-633.807,-1271.19,-1255.7,-1198.47,-1320.33,-1325.84,-1325.84 0|0:350:128,41,21,57,0,3,0,58,35,1:128:4895:41,21,57,0,3,0,58,35,1:1588,788,2189,0,120,0,2347,1288,38:-154.99,-63.0804,-452.387,-128.985,-400.193,-524.312,-13.8434,-285.051,-350.956,-398.333,-193.521,-464.729,-530.633,-415.492,-595.17,-183.636,-454.844,-520.748,-405.606,-585.284,-584.381,-193.521,-464.729,-530.633,-415.492,-595.17,-585.284,-595.17,0,-271.21,-337.115,-221.973,-401.652,-391.766,-401.652,-384.192,-88.2412,-359.448,-425.352,-310.211,-489.888,-480.003,-489.888,-296.37,-479.352,-190.405,-461.613,-527.517,-412.375,-592.053,-582.168,-592.053,-398.535,-486.772,-591.752 0|0:500:165,39,70,52,4,11,14,29,2,91:165:6409:39,70,52,4,11,14,29,2,91:1534,2720,2023,150,422,525,1168,77,3546:-241.734,-165.218,-680.099,-67.9071,-468.343,-573.456,-125.16,-525.595,-428.285,-636.127,-279.119,-679.554,-582.244,-639.496,-804.535,-256.768,-657.203,-559.892,-617.145,-771.104,-780.077,-248.411,-648.846,-551.536,-608.788,-762.747,-740.396,-770.817,-195.136,-595.572,-498.261,-555.514,-709.473,-687.122,-678.765,-713.028,-285.082,-685.517,-588.207,-645.459,-799.418,-777.067,-768.71,-715.436,-811.1,0,-400.436,-303.125,-360.378,-514.337,-491.986,-483.629,-430.355,-520.3,-499.228 dDocent_Contig_6756 12 . C T 492.014 . AB=0.164021;ABP=188.321;AC=3;AF=0.25;AN=12;AO=41;CIGAR=1X;DP=472;DPB=472;DPRA=0;EPP=92.0407;EPPR=938.915;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.988399;PAO=0;PQA=0;PQR=0;PRO=0;QA=1612;QR=17279;RO=431;RPL=0;RPP=92.0407;RPPR=938.915;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=431;SRP=938.915;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:61:58,3:58:2310:3:113:0,-7.82591,-197.526 0/1:48:33,15:33:1319:15:597:-39.6206,0,-104.525 0/1:69:62,7:62:2455:7:271:-3.98299,0,-200.314 0/1:72:63,9:63:2546:9:357:-10.8188,0,-207.592 0/0:112:109,3:109:4390:3:119:0,-22.62,-383.937 0/0:110:106,4:106:4259:4:155:0,-18.7891,-368.943 dDocent_Contig_6757 17 . C T 26046.2 . AB=0.0609168;ABP=2779.48;AC=0;AF=0;AN=12;AO=101;CIGAR=2X3M;DP=1658;DPB=1658;DPRA=0;EPP=222.329;EPPR=509;GTI=0;LEN=1;MEANALT=8.5;MQM=57.7723;MQMR=59.9367;NS=6;NUMALT=5;ODDS=0;PAIRED=0.920792;PAIREDR=0.949367;PAO=0;PQA=0;PQR=0;PRO=0;QA=3850;QR=9330;RO=237;RPL=0;RPP=222.329;RPPR=517.649;RPR=101;RUN=1;SAF=101;SAP=222.329;SAR=0;SRF=236;SRP=509;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:193:25,87,12,15,8,38:25:983:87,12,15,8,38:3310,454,576,293,1460:-298.032,-36.0132,-90.6834,-268.342,-79.6569,-345.587,-258.279,-69.5937,-301.921,-334.621,-281.887,-93.2022,-325.528,-315.465,-360.336,-188.684,0,-232.326,-222.263,-245.871,-258.103 0|0:416:55,181,6,20,35,82:55:2155:181,6,20,35,82:7043,237,791,1324,2880:-610.952,-51.1991,-173.923,-608.006,-208.906,-783.405,-562.41,-163.31,-720.113,-733.595,-519.577,-120.476,-677.28,-631.684,-686.246,-399.096,0,-556.797,-511.202,-468.37,-551.616 0|0:289:74,121,4,13,14,47:74:2919:121,4,13,14,47:4780,149,512,541,1834:-371.022,0,-203.744,-381.328,-228.199,-620.29,-351.177,-198.047,-579.373,-587.43,-348.863,-195.734,-577.06,-546.908,-584.815,-244.443,-91.3133,-472.639,-442.487,-440.174,-470.46 0|0:288:29,164,0,5,28,42:29:1141:164,0,5,28,42:6337,0,198,1063,1546:-539.879,-30.3548,-74.718,-548.609,-124.087,-642.337,-532.312,-107.789,-626.04,-624.534,-462.961,-38.438,-556.689,-540.392,-548.26,-424.52,0,-518.247,-501.95,-432.6,-505.604 0|0:226:15,90,0,42,6,66:15:592:90,0,42,6,66:3478,0,1653,230,2535:-431.674,-155.197,-176.818,-436.19,-203.911,-484.902,-300.205,-67.9233,-348.918,-336.275,-417.312,-185.033,-466.024,-330.04,-464.218,-232.278,0,-280.991,-145.006,-262.113,-261.123 0|0:246:39,87,0,34,10,72:39:1540:87,0,34,10,72:3381,0,1325,399,2807:-364.285,-100.613,-201.138,-376.026,-227.328,-502.74,-267.706,-119.009,-394.421,-384.186,-343.164,-194.466,-469.879,-361.56,-466.869,-148.695,0,-275.41,-167.092,-242.549,-253.736 dDocent_Contig_6758 64 . T A 577.611 . AB=0.347222;ABP=17.6074;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=1X;DP=546;DPB=546;DPRA=0.759494;EPP=57.2971;EPPR=1134.35;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=896;QR=19661;RO=521;RPL=25;RPP=57.2971;RPPR=1134.35;RPR=0;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=521;SRP=1134.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:55:55,0:55:1996:0:0:0,-16.5566,-179.906 0/1:72:47,25:47:1701:25:896:-59.284,0,-131.697 0/0:67:67,0:67:2560:0:0:0,-20.169,-230.594 0/0:29:29,0:29:1104:0:0:0,-8.72987,-99.6638 0/0:150:150,0:150:5690:0:0:0,-45.1545,-512.082 0/0:173:173,0:173:6610:0:0:0,-52.0782,-594.807 dDocent_Contig_6759 8 . A C 3811.23 . AB=0.165387;ABP=1396.63;AC=5;AF=0.416667;AN=12;AO=244;CIGAR=1X;DP=1614;DPB=1614;DPRA=0;EPP=532.85;EPPR=2973.58;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9386;QR=52188;RO=1368;RPL=0;RPP=532.85;RPPR=2973.58;RPR=244;RUN=1;SAF=244;SAP=532.85;SAR=0;SRF=1368;SRP=2973.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:256:220,36:220:8346:36:1391:-48.4083,0,-673.863 0/1:307:251,56:251:9572:56:2156:-101.847,0,-768.751 0/0:181:174,7:174:6646:7:272:0,-29.6392,-573.203 0/1:279:221,58:221:8448:58:2234:-117.291,0,-676.105 0/1:344:299,43:299:11438:43:1648:-45.2405,0,-925.633 0/1:247:203,44:203:7738:44:1685:-77.5581,0,-621.898 dDocent_Contig_6760 13 . G A 17254.8 . AB=0.247258;ABP=559.516;AC=8;AF=0.666667;AN=12;AO=248;CIGAR=1X3M1X;DP=1003;DPB=1003;DPRA=0;EPP=541.535;EPPR=730.454;GTI=0;LEN=1;MEANALT=2.83333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9732;QR=13027;RO=335;RPL=0;RPP=541.535;RPPR=730.454;RPR=248;RUN=1;SAF=248;SAP=541.535;SAR=0;SRF=335;SRP=730.454;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:152:82,64,6,0:82:3170:64,6,0:2519,237,0:-182.535,0,-241.068,-187.716,-240.831,-446.248,-207.219,-260.334,-448.055,-467.557 0|1:164:54,89,9,12:54:2097:89,9,12:3523,346,455:-273.711,0,-145.506,-261.565,-143.895,-431.146,-252.662,-134.992,-396.55,-421.34 0|1:207:85,84,23,15:85:3295:84,23,15:3319,915,562:-247.537,0,-245.394,-197.782,-195.338,-461.538,-227.1,-224.656,-422.437,-493.263 0|1:159:87,67,3,1:87:3412:67,3,1:2635,120,38:-190.554,0,-260.419,-206.858,-270.702,-486.546,-213.627,-277.472,-484.333,-493.917 1|1:187:8,28,151,0:8:308:28,151,0:1087,5909,0:-547.451,-460.554,-477.412,-64.0222,0,-43.8527,-549.86,-485.841,-89.3082,-575.146 1|1:134:19,56,56,3:19:745:56,56,3:2195,2205,113:-294.911,-120.131,-164.538,-119.236,0,-163.643,-291.371,-172.137,-171.242,-351.733 dDocent_Contig_6761 25 . T C 476.077 . AB=0.169697;ABP=159.369;AC=2;AF=0.166667;AN=12;AO=28;CIGAR=1X;DP=544;DPB=544;DPRA=0.870712;EPP=63.8115;EPPR=1123.49;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1109;QR=20634;RO=516;RPL=0;RPP=63.8115;RPPR=1123.49;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=516;SRP=1123.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:73:73,0:73:2924:0:0:0,-21.9752,-263.248 0/0:119:119,0:119:4773:0:0:0,-35.8226,-429.453 0/0:67:67,0:67:2710:0:0:0,-20.169,-244.007 0/0:120:120,0:120:4751:0:0:0,-36.1236,-427.478 0/1:69:61,8:61:2447:8:323:-8.66752,0,-199.601 0/1:96:76,20:76:3029:20:786:-42.1621,0,-243.788 dDocent_Contig_6762 23 . G A 210.574 . AB=0.11828;ABP=238.417;AC=2;AF=0.166667;AN=12;AO=33;CIGAR=1X;DP=733;DPB=733;DPRA=0.825175;EPP=74.6689;EPPR=1523.04;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994286;PAO=0;PQA=0;PQR=0;PRO=0;QA=1301;QR=27887;RO=700;RPL=0;RPP=74.6689;RPPR=1523.04;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=700;SRP=1523.04;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:89:79,10:79:3121:10:400:-9.56715,0,-254.177 0/0:92:91,1:91:3574:1:38:0,-23.8975,-317.898 0/0:204:197,7:197:7885:7:260:0,-37.6621,-685.455 0/1:97:85,12:85:3408:12:484:-14.7121,0,-277.562 0/0:108:105,3:105:4196:3:119:0,-21.4162,-366.506 0/0:143:143,0:143:5703:0:0:0,-43.0473,-513.063 dDocent_Contig_6763 10 . C A 56.0311 . AB=0.0671642;ABP=221.065;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1M1I1X;DP=338;DPB=345;DPRA=0.701333;EPP=33.4109;EPPR=689.196;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.857143;PAIREDR=0.759494;PAO=0;PQA=0;PQR=0;PRO=0;QA=538;QR=12237;RO=316;RPL=0;RPP=33.4109;RPPR=689.196;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=316;SRP=689.196;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:35:32,3,0:32:1227:3,0:123,0:-0.928738,0,-100.18,-10.5617,-101.083,-111.238 0|0:60:57,2,1:57:2186:2,1:81,39:0,-10.4696,-189.27,-13.9578,-186.666,-193.045 0|1:40:36,4,0:36:1399:4,0:140,0:-0.899059,0,-114.143,-11.7361,-115.347,-126.729 0|0:59:50,2,7:50:1933:2,7:79,270:-7.11427,-15.6631,-173.823,0,-152.252,-156.646 0|0:75:75,0,0:75:2933:0,0:0,0:0,-22.5772,-264.112,-22.5772,-264.112,-264.112 0|0:69:66,3,0:66:2559:3,0:115,0:0,-10.0473,-219.76,-19.868,-220.663,-230.101 dDocent_Contig_6764 33 . G A 5671.86 . AB=0.378585;ABP=69.9772;AC=4;AF=0.333333;AN=12;AO=207;CIGAR=4M1X3M;DP=633;DPB=618;DPRA=0;EPP=452.505;EPPR=828.17;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.985507;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8169;QR=14813;RO=380;RPL=0;RPP=452.505;RPPR=828.17;RPR=207;RUN=1;SAF=207;SAP=452.505;SAR=0;SRF=380;SRP=828.17;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:110:100,0,9:100:3903:0,9:0,356:0,-30.103,-350.909,-0.80833,-321.611,-318.902 0|1:88:56,1,29:56:2220:1,29:40,1160:-78.7876,-92.3499,-274.789,0,-179.538,-174.104 0|0:62:48,10,4:48:1877:10,4:373,155:-16.0734,0,-151.303,-17.7849,-141.579,-170.905 0|1:108:79,5,22:79:3054:5,22:190,881:-48.8064,-57.0121,-306.316,0,-235.24,-244.196 0|1:128:57,12,58:57:2225:12,58:476,2276:-170.005,-147.982,-327.264,0,-143.708,-165.43 0|1:137:40,12,85:40:1534:12,85:470,3341:-262.736,-236.133,-358.41,0,-87.2397,-100.298 dDocent_Contig_6765 31 . G A 6938.91 . AB=0.323775;ABP=228.784;AC=5;AF=0.416667;AN=12;AO=271;CIGAR=1X3M1X;DP=941;DPB=941;DPRA=1.60962;EPP=591.479;EPPR=1442.7;GTI=0;LEN=1;MEANALT=2.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.99631;PAIREDR=0.99095;PAO=0;PQA=0;PQR=0;PRO=0;QA=10598;QR=25617;RO=663;RPL=0;RPP=591.479;RPPR=1442.7;RPR=271;RUN=1;SAF=271;SAP=591.479;SAR=0;SRF=663;SRP=1442.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:102:86,15:86:3296:15:599:-23.4755,0,-265.996 0|1:115:103,12:103:4005:12:460:-7.12273,0,-325.892 0|0:104:103,0:103:3994:0:0:0,-31.0061,-359.324 0|1:147:112,32:112:4330:32:1265:-70.382,0,-345.982 0|1:236:129,106:129:4967:106:4145:-301.952,0,-375.902 0|1:237:130,106:130:5025:106:4129:-300.18,0,-380.774 dDocent_Contig_6766 29 . G C 146.273 . AB=0.114286;ABP=183.925;AC=1;AF=0.0833333;AN=12;AO=49;CIGAR=1X;DP=1045;DPB=1045;DPRA=0.871391;EPP=109.412;EPPR=2163.63;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=59.8874;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.897959;PAIREDR=0.986935;PAO=0;PQA=0;PQR=0;PRO=0;QA=1944;QR=38975;RO=995;RPL=0;RPP=109.412;RPPR=2163.63;RPR=49;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=995;SRP=2163.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:156:148,8:148:5833:8:316:0,-18.156,-495.991 0/0:148:138,10:138:5462:10:388:0,-9.27884,-456.113 0/1:140:124,16:124:4827:16:644:-16.1501,0,-392.196 0/0:220:204,15:204:7987:15:596:0,-12.1311,-659.978 0/0:225:225,0:225:8783:0:0:0,-67.7317,-789.977 0/0:156:156,0:156:6083:0:0:0,-46.9607,-547.27 dDocent_Contig_6767 27 . G C 14918.1 . AB=0.0952381;ABP=1108.7;AC=0;AF=0;AN=12;AO=74;CIGAR=1M1D2M2X1M1X;DP=1581;DPB=1570.5;DPRA=0;EPP=163.699;EPPR=1850.93;GTI=0;LEN=1;MEANALT=6.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2859;QR=31650;RO=851;RPL=0;RPP=163.699;RPPR=1850.93;RPR=74;RUN=1;SAF=74;SAP=163.699;SAR=0;SRF=851;SRP=1850.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:233:123,0,95:123:4558:0,95:0,3752:-271.671,-308.698,-681.603,0,-372.932,-344.334 0|0:354:225,0,100:225:8333:0,100:0,3894:-252.252,-319.984,-1001.7,0,-681.733,-651.63 0|0:217:92,0,98:92:3468:0,98:0,3884:-291.601,-319.296,-603.483,0,-284.192,-254.691 0|0:256:136,7,95:136:5080:7,95:278,3780:-270.297,-288.349,-702.165,0,-393.047,-387.338 0|0:279:133,40,95:133:4899:40,95:1547,3721:-265.727,-178.705,-567.222,0,-273.493,-371.959 0|0:242:142,27,59:142:5312:27,59:1034,2359:-151.488,-109.381,-536.24,0,-350.157,-417.25 dDocent_Contig_6768 26 . T A 177.746 . AB=0.107623;ABP=301.223;AC=1;AF=0.0833333;AN=12;AO=32;CIGAR=1X;DP=1210;DPB=1210;DPRA=1.04786;EPP=72.4974;EPPR=2561;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.990662;PAO=0;PQA=0;PQR=0;PRO=0;QA=1274;QR=47079;RO=1178;RPL=0;RPP=72.4974;RPPR=2561;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=1178;SRP=2561;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:204:204,0:204:8112:0:0:0,-61.4101,-729.634 0/0:228:228,0:228:9137:0:0:0,-68.6348,-821.769 0/0:154:154,0:154:6180:0:0:0,-46.3586,-555.951 0/0:193:185,8:185:7374:8:317:0,-29.2023,-634.392 0/0:208:208,0:208:8336:0:0:0,-62.6142,-749.743 0/1:223:199,24:199:7940:24:957:-19.2975,0,-647.043 dDocent_Contig_6769 16 . A G 390.287 . AB=0.118541;ABP=418.831;AC=1;AF=0.0833333;AN=12;AO=98;CIGAR=1X;DP=2490;DPB=2490;DPRA=0.733895;EPP=215.815;EPPR=5197.17;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998328;PAO=0;PQA=0;PQR=0;PRO=0;QA=3916;QR=94118;RO=2392;RPL=0;RPP=215.815;RPPR=5197.17;RPR=98;RUN=1;SAF=98;SAP=215.815;SAR=0;SRF=2392;SRP=5197.17;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:329:290,39:290:11354:39:1545:-40.2506,0,-922.12 0/0:443:420,23:420:16534:23:917:0,-50.5245,-1404.02 0/0:277:264,13:264:10417:13:523:0,-35.9694,-889.482 0/0:432:409,23:409:16140:23:931:0,-45.9521,-1367.34 0/0:506:506,0:506:19826:0:0:0,-152.321,-1782.86 0/0:503:503,0:503:19847:0:0:0,-151.418,-1784.72 dDocent_Contig_6770 20 . G A 209.948 . AB=0.0915751;ABP=1189.66;AC=1;AF=0.0833333;AN=12;AO=258;CIGAR=1X;DP=4270;DPB=4270;DPRA=0;EPP=563.25;EPPR=8678.04;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.992248;PAIREDR=0.99224;PAO=0;PQA=0;PQR=0;PRO=0;QA=10247;QR=159294;RO=3995;RPL=0;RPP=563.25;RPPR=8678.04;RPR=258;RUN=1;SAF=258;SAP=563.25;SAR=0;SRF=3995;SRP=8678.04;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:819:740,75:740:29414:75:2976:-22.2167,0,-2398.89 0/0:915:853,55:853:33942:55:2175:0,-77.8123,-2855.73 0/0:537:497,40:497:19805:40:1615:0,-16.0766,-1635.19 0/0:796:748,42:748:29923:42:1676:0,-87.1578,-2539.25 0/0:620:596,24:596:23832:24:943:0,-101.467,-2057.62 0/0:583:561,22:561:22378:22:862:0,-97.6142,-1934.19 dDocent_Contig_6771 201 . A G 48367.8 . AB=0.452643;ABP=75.6116;AC=6;AF=0.5;AN=12;AO=1687;CIGAR=1X;DP=3727;DPB=3727;DPRA=0;EPP=3597.13;EPPR=4220.1;GTI=0;LEN=1;MEANALT=1.66667;MQM=59.4861;MQMR=58.7088;NS=6;NUMALT=1;ODDS=0;PAIRED=0.771191;PAIREDR=0.78603;PAO=0;PQA=0;PQR=0;PRO=0;QA=66602;QR=79955;RO=2033;RPL=1676;RPP=3571.36;RPPR=3750.09;RPR=11;RUN=1;SAF=5;SAP=3622.98;SAR=1682;SRF=57;SRP=3936.4;SRR=1976;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:503:284,218:284:11211:218:8536:-610.645,0,-843.268 0/1:743:383,357:383:15040:357:14064:-1036.03,0,-1102.31 0/1:710:414,296:414:16397:296:11730:-840.494,0,-1237.31 0/1:736:365,370:365:14340:370:14587:-1085.87,0,-1043.94 0/1:497:288,209:288:11340:209:8241:-590.611,0,-858.559 0/1:538:299,237:299:11627:237:9444:-684.349,0,-862.76 dDocent_Contig_6773 123 . C T 130.766 . AB=0.212121;ABP=26.7649;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=111;DPB=111;DPRA=0.947368;EPP=20.3821;EPPR=224.5;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0.735294;PAO=0;PQA=0;PQR=0;PRO=0;QA=321;QR=4066;RO=102;RPL=0;RPP=20.3821;RPPR=224.5;RPR=8;RUN=1;SAF=0;SAP=20.3821;SAR=8;SRF=0;SRP=224.5;SRR=102;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:11:8,2:8:319:2:81:-4.26763,0,-25.658 0/0:21:20,1:20:804:1:37:0,-2.6238,-68.9796 0/1:22:17,5:17:665:5:203:-12.0304,0,-53.5576 0/0:16:16,0:16:642:0:0:0,-4.81648,-58.1118 0/0:13:13,0:13:519:0:0:0,-3.91339,-47.0566 0/0:28:28,0:28:1117:0:0:0,-8.42884,-100.811 dDocent_Contig_6774 93 . G T 4683.96 . AB=0.366013;ABP=98.4415;AC=2;AF=0.166667;AN=12;AO=224;CIGAR=1M2D17M1X;DP=2252;DPB=2236.62;DPRA=0.736758;EPP=489.42;EPPR=3772.69;GTI=0;LEN=1;MEANALT=6.5;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=10;PRO=1;QA=7055;QR=58194;RO=1736;RPL=224;RPP=489.42;RPPR=3772.69;RPR=0;RUN=1;SAF=224;SAP=489.42;SAR=0;SRF=1736;SRP=3772.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:361:305,0,0,16,28:305:10183:0,0,16,28:0,0,522,886:0,-91.8141,-916.224,-91.8141,-916.224,-916.224,-49.6521,-874.074,-874.074,-869.258,-20.5058,-844.937,-844.937,-802.786,-836.508 0|0:394:343,0,0,2,39:343:11499:0,0,2,39:0,0,65,1286:-0.774162,-104.027,-1035.39,-104.027,-1035.39,-1035.39,-98.7804,-1030.14,-1030.14,-1029.54,0,-931.424,-931.424,-926.178,-919.684 0|0:527:458,0,0,6,50:458:15384:0,0,6,50:0,0,201,1694:0,-137.872,-1384.15,-137.872,-1384.15,-1384.15,-121.592,-1367.87,-1367.87,-1366.07,-0.452926,-1246.79,-1246.79,-1230.51,-1231.74 0|0:358:312,0,0,18,3:312:10428:0,0,18,3:0,0,568,104:0,-93.9214,-938.267,-93.9214,-938.267,-938.267,-48.2231,-892.581,-892.581,-887.162,-85.4645,-929.814,-929.814,-884.127,-928.91 0|1:291:133,121,31,0,2:133:4479:121,31,0,2:3835,1064,0,66:-268.587,0,-326.526,-222.224,-276.555,-575.852,-308.624,-362.95,-585.184,-671.58,-303.287,-357.614,-579.848,-666.244,-665.642 0|1:321:185,103,16,0,14:185:6221:103,16,0,14:3220,558,0,433:-203.026,0,-473.031,-213.328,-458.652,-712.553,-258.717,-504.037,-717.37,-762.755,-223.973,-469.294,-682.626,-728.011,-723.797 dDocent_Contig_6775 84 . G A 16755.2 . AB=0.362468;ABP=322.563;AC=6;AF=0.5;AN=12;AO=705;CIGAR=1X;DP=1945;DPB=1945;DPRA=0;EPP=1533.9;EPPR=2689.12;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999192;PAO=0;PQA=0;PQR=0;PRO=0;QA=25232;QR=44145;RO=1237;RPL=705;RPP=1533.9;RPPR=2689.12;RPR=0;RUN=1;SAF=705;SAP=1533.9;SAR=0;SRF=1237;SRP=2689.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:313:209,103:209:7263:103:3633:-232.968,0,-559.527 0/1:447:291,155:291:10150:155:5432:-354.651,0,-779.093 0/1:320:186,134:186:6704:134:4874:-342.456,0,-507.066 0/1:325:205,120:205:7462:120:4306:-289.862,0,-573.738 0/1:237:142,95:142:5179:95:3439:-238.362,0,-394.872 0/1:303:204,98:204:7387:98:3548:-228.447,0,-573.767 dDocent_Contig_6776 17 . A T 32.4675 . AB=0.181818;ABP=12.6832;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=174;DPB=174;DPRA=0.9;EPP=11.6962;EPPR=372.161;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.964706;PAO=0;PQA=0;PQR=0;PRO=0;QA=162;QR=6791;RO=170;RPL=0;RPP=11.6962;RPPR=372.161;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=170;SRP=372.161;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:11:9,2:9:363:2:82:-4.46835,0,-29.723 0/0:26:26,0:26:1036:0:0:0,-7.82678,-93.5359 0/0:31:31,0:31:1237:0:0:0,-9.33193,-111.601 0/0:43:41,2:41:1627:2:80:0,-5.35271,-139.071 0/0:40:40,0:40:1614:0:0:0,-12.0412,-145.488 0/0:23:23,0:23:914:0:0:0,-6.92369,-82.567 dDocent_Contig_6777 7 . A G 960.675 . AB=0.271111;ABP=105.398;AC=5;AF=0.416667;AN=12;AO=63;CIGAR=1X;DP=270;DPB=270;DPRA=0;EPP=139.813;EPPR=441.648;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1961;QR=7652;RO=202;RPL=0;RPP=139.813;RPPR=441.648;RPR=63;RUN=1;SAF=63;SAP=139.813;SAR=0;SRF=202;SRP=441.648;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:17,5:17:615:5:182:-9.82354,0,-48.7738 0/1:55:44,11:44:1684:11:311:-11.7052,0,-135.266 0/1:47:32,13:32:1200:13:420:-24.3801,0,-94.5844 0/1:61:43,17:43:1619:17:557:-32.2444,0,-127.8 0/0:45:43,2:43:1650:2:64:0,-7.46862,-142.686 0/1:39:23,15:23:884:15:427:-27.1362,0,-68.319 dDocent_Contig_6778 26 . A G 5524.89 . AB=0.0517241;ABP=4153.67;AC=1;AF=0.0833333;AN=12;AO=176;CIGAR=1M1X1M1X8M1X;DP=3717;DPB=3761.69;DPRA=0;EPP=385.189;EPPR=6124.39;GTI=0;LEN=1;MEANALT=12.1667;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=0.994318;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6774;QR=109283;RO=2819;RPL=0;RPP=385.189;RPPR=6124.39;RPR=176;RUN=1;SAF=176;SAP=385.189;SAR=0;SRF=2819;SRP=6124.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:474:311,66,11,2,38,29:311:12022:66,11,2,38,29:2524,396,75,1522,1148:-113.463,0,-967.524,-174.779,-955.087,-1158.86,-200.941,-981.25,-1156.03,-1187.73,-81.6967,-862.01,-1036.79,-1062.95,-1057.65,-112.6,-892.911,-1067.69,-1093.85,-974.612,-1091.26 0|0:690:553,47,1,1,39,20:553:21503:47,1,1,39,20:1804,38,41,1555,791:0,-18.4134,-1771.28,-163.353,-1782.31,-1930.07,-163.085,-1782.04,-1926.98,-1929.8,-38.4125,-1657.37,-1802.31,-1802.05,-1793.69,-101.381,-1720.34,-1865.28,-1865.01,-1740.34,-1862.38 0|0:495:391,33,0,25,39,4:391:15244:33,0,25,39,4:1298,0,974,1552,164:-10.0847,-21.0183,-1264.05,-127.787,-1273.99,-1380.76,-47.7423,-1193.94,-1300.71,-1293.18,0,-1146.2,-1252.97,-1172.93,-1241.23,-114.25,-1260.45,-1367.22,-1287.17,-1239.44,-1366.02 0|0:649:524,6,0,35,47,7:524:20299:6,0,35,47,7:238,0,1356,1870,284:0,-138.148,-1803.86,-157.74,-1805.66,-1825.26,-46.3629,-1694.29,-1713.88,-1703.34,-3.76664,-1651.7,-1671.29,-1559.92,-1657.14,-134.317,-1782.24,-1801.83,-1690.46,-1647.87,-1799.73 0|0:725:538,7,111,31,0,0:538:20719:7,111,31,0,0:273,4174,1179,0,0:-179.987,-319.501,-2018.5,0,-1678.67,-1667.69,-245.268,-1923.93,-1604.44,-1937.04,-341.942,-2020.61,-1701.11,-1946.37,-2043.05,-341.942,-2020.61,-1701.11,-1946.37,-2043.05,-2043.05 0|0:684:502,17,133,9,0,0:502:19496:17,133,9,0,0:637,4974,345,0,0:-256.176,-355.131,-1951.95,0,-1549.8,-1561.93,-378.98,-1928.76,-1573.65,-1978.21,-407.293,-1957.07,-1601.96,-1980.92,-2009.23,-407.293,-1957.07,-1601.96,-1980.92,-2009.23,-2009.23 dDocent_Contig_6779 12 . T A 16354.3 . AB=0.0590571;ABP=3405.95;AC=8;AF=0.666667;AN=12;AO=119;CIGAR=3M1X2M1X2M;DP=2015;DPB=1867.44;DPRA=0;EPP=227.84;EPPR=489.42;GTI=0;LEN=1;MEANALT=29.5;MQM=53.9244;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0.3;PQA=10.6;PQR=10.6;PRO=0.3;QA=4593;QR=8732;RO=224;RPL=0;RPP=261.416;RPPR=489.42;RPR=119;RUN=1;SAF=115;SAP=227.84;SAR=4;SRF=224;SRP=489.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:247:32,39,15,10,16,2,3,2,47,7:32:1239:39,15,10,16,2,3,2,47,7:1493,545,389,627,74,116,76,1841,277:-160.398,-49.5364,-139.574,-125.893,-107.175,-223.155,-138.083,-119.366,-195.722,-236.851,-119.062,-100.345,-176.701,-188.891,-216.023,-164.736,-146.018,-222.374,-234.565,-215.544,-265.911,-160.503,-141.786,-218.142,-230.333,-211.311,-256.985,-261.378,-163.799,-145.081,-221.438,-233.628,-214.607,-260.281,-256.048,-264.974,-18.7171,0,-76.3566,-88.547,-69.5255,-115.199,-110.967,-114.263,-106.347,-147.775,-129.057,-205.414,-217.604,-198.583,-244.257,-240.024,-243.32,-98.2386,-247.445 1|1:517:38,132,24,28,42,17,6,22,55,62:38:1472:132,24,28,42,17,6,22,55,62:5017,879,1093,1629,637,237,870,2184,2410:-471.6,-75.0099,-156.197,-411.845,-124.739,-525.543,-393.19,-106.084,-442.919,-505.684,-357.504,-70.3978,-407.233,-388.577,-465.783,-434.013,-146.907,-483.742,-465.087,-429.4,-549.818,-463.536,-176.43,-513.265,-494.61,-458.923,-535.433,-582.653,-411.441,-124.334,-461.17,-442.514,-406.828,-483.337,-512.86,-525.741,-303.277,-16.1705,-353.006,-334.351,-298.665,-375.174,-404.697,-352.602,-407.644,-287.106,0,-336.835,-318.18,-282.494,-359.003,-388.526,-336.431,-228.267,-389.365 0|1:315:42,90,10,4,19,9,18,20,26,3:42:1634:90,10,4,19,9,18,20,26,3:3475,371,159,733,352,675,791,1020,118:-270.247,0,-107.188,-252.554,-103.944,-383.824,-269.799,-121.189,-373.743,-402.875,-226.214,-77.6047,-330.158,-347.403,-354.775,-255.609,-106.999,-359.553,-376.798,-333.213,-387.18,-227.607,-78.9974,-331.551,-348.796,-305.211,-334.606,-356.469,-217.792,-69.1814,-321.736,-338.981,-295.396,-324.79,-296.789,-346.051,-199.005,-50.3945,-302.949,-320.194,-276.609,-306.003,-278.002,-268.186,-325.458,-273.406,-124.796,-377.35,-394.595,-351.01,-380.405,-352.403,-342.588,-323.801,-406.783 1|0:481:28,133,29,10,47,2,25,15,39,35:28:1082:133,29,10,47,2,25,15,39,35:5103,1073,387,1824,71,963,587,1538,1308:-466.473,-59.1275,-107.958,-387.231,-60.3254,-467.369,-443.231,-116.325,-444.429,-529.088,-326.906,0,-328.104,-384.104,-401.625,-469.351,-142.445,-470.549,-526.548,-410.224,-557.616,-395.838,-68.9317,-397.036,-453.036,-336.711,-479.155,-477.18,-426.638,-99.7311,-427.835,-483.835,-367.51,-509.955,-436.442,-510.99,-348.472,-21.5658,-349.67,-405.67,-289.345,-431.79,-358.277,-389.076,-425.6,-368.957,-42.0514,-370.155,-426.155,-309.83,-452.274,-378.762,-409.561,-331.396,-447.289 0|1:203:34,35,6,2,24,9,5,1,1,5:34:1331:35,6,2,24,9,5,1,1,5:1336,205,79,918,339,199,40,40,200:-98.7054,0,-98.9124,-93.0728,-93.5809,-200.714,-102.439,-102.947,-196.019,-211.284,-35.8771,-36.3855,-129.457,-138.824,-138.1,-82.9884,-83.4965,-176.568,-185.934,-119.373,-189.726,-92.5533,-93.0614,-186.133,-195.499,-128.938,-176.049,-200.495,-105.645,-106.153,-199.225,-208.591,-142.03,-189.14,-198.705,-214.791,-105.645,-106.153,-199.225,-208.591,-142.03,-189.14,-198.705,-211.797,-214.791,-92.643,-93.151,-186.222,-195.589,-129.027,-176.138,-185.703,-198.795,-198.795,-200.585 0|1:252:50,62,3,2,48,15,8,0,3,7:50:1974:62,3,2,48,15,8,0,3,7:2380,113,75,1833,589,311,0,119,280:-179.229,0,-143.775,-185.046,-153.203,-346.579,-188.146,-156.303,-341.347,-349.98,-47.3966,-15.5554,-200.599,-203.699,-195.384,-148.809,-116.967,-302.01,-305.11,-164.362,-306.73,-168.723,-136.881,-321.925,-325.025,-184.277,-285.688,-328.752,-194.281,-162.438,-347.482,-350.582,-209.834,-311.245,-331.16,-356.718,-184.484,-152.642,-337.686,-340.786,-200.038,-301.449,-321.364,-346.921,-346.018,-171.382,-139.54,-324.584,-327.684,-186.935,-288.347,-308.262,-333.819,-324.023,-331.712 dDocent_Contig_6780 14 . T G 145.668 . AB=0.115108;ABP=181.868;AC=1;AF=0.0833333;AN=12;AO=29;CIGAR=1X;DP=1145;DPB=1145;DPRA=0.544708;EPP=65.983;EPPR=2426.37;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.991935;PAO=0;PQA=0;PQR=0;PRO=0;QA=1149;QR=44627;RO=1116;RPL=0;RPP=65.983;RPPR=2426.37;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=1116;SRP=2426.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:135:129,6:129:5195:6:244:0,-18.3004,-445.05 0/0:186:183,3:183:7313:3:115:0,-45.2684,-647.062 0/1:139:123,16:123:4903:16:640:-16.0897,0,-399.306 0/0:137:133,4:133:5325:4:150:0,-27.3791,-465.226 0/0:295:295,0:295:11735:0:0:0,-88.8038,-1055.31 0/0:253:253,0:253:10156:0:0:0,-76.1606,-913.343 dDocent_Contig_6781 98 . N A 484.979 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=15;CIGAR=1X;DP=15;DPB=15;DPRA=0;EPP=35.5824;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=516;QR=0;RO=0;RPL=15;RPP=35.5824;RPPR=0;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:103:-9.6096,-0.90309,0 1/1:9:0,9:0:0:9:309:-28.1423,-2.70927,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.64733,-0.60206,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_6782 55 . T C 274.417 . AB=0.157895;ABP=118.898;AC=3;AF=0.25;AN=12;AO=22;CIGAR=7M1X1M;DP=177;DPB=173.111;DPRA=0;EPP=50.7827;EPPR=328.731;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=0.818182;PAIREDR=0.86;PAO=0;PQA=0;PQR=0;PRO=0;QA=866;QR=5694;RO=150;RPL=22;RPP=50.7827;RPPR=328.731;RPR=0;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=150;SRP=328.731;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:35:32,1,2:32:1190:1,2:38,81:0,-6.52471,-103.583,-2.93727,-97.2029,-99.7176 0|0:28:21,4,3:21:805:4,3:148,115:-5.7775,0,-64.8643,-2.65631,-56.6313,-67.8328 0|1:20:18,0,2:18:688:0,2:0,79:-1.47703,-6.89557,-63.3372,0,-56.8349,-56.2329 0|1:31:22,0,9:22:835:0,9:0,353:-22.7998,-29.4225,-97.8819,0,-68.8477,-66.1384 0|0:28:26,0,2:26:996:0,2:0,80:0,-7.82678,-89.5496,-0.837049,-82.9582,-82.3562 0|1:35:31,0,4:31:1180:0,4:0,158:-4.06422,-13.3962,-110.169,0,-97.166,-95.9618 dDocent_Contig_6783 17 . T C 106994 . AB=0.880034;ABP=1498.33;AC=10;AF=0.833333;AN=12;AO=3218;CIGAR=1X4M;DP=3526;DPB=3526;DPRA=0;EPP=6990.81;EPPR=569.765;GTI=0;LEN=1;MEANALT=3.5;MQM=59.927;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.999689;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=128177;QR=10240;RO=261;RPL=0;RPP=6990.81;RPPR=569.765;RPR=3218;RUN=1;SAF=3218;SAP=6990.81;SAR=0;SRF=261;SRP=569.765;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:426:33,22,368:33:1292:22,368:879,14689:-1204.32,-1141.86,-1241.47,-4.5476,-38.3768,0 0|1:640:68,0,569:68:2625:0,569:0,22616:-1841.41,-1861.88,-2077.43,0,-215.577,-44.2906 1|1:469:39,7,422:39:1543:7,422:283,16788:-1370.41,-1358.82,-1483.7,-0.0559739,-103.701,0 0|1:552:62,6,480:62:2450:6,480:242,19216:-1564.2,-1562.91,-1762.72,0,-181.666,-57.1209 1|1:673:41,0,632:41:1610:0,632:0,25246:-2124.34,-2136.68,-2269.1,-57.4432,-190.251,0 1|1:766:18,0,747:18:720:0,747:0,29622:-2597.94,-2603.36,-2662.67,-165.275,-224.869,0 dDocent_Contig_6784 148 . A G 72.2597 . AB=0.145833;ABP=55.3066;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=116;DPB=116;DPRA=1.25758;EPP=22.5536;EPPR=235.358;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.850467;PAO=0;PQA=0;PQR=0;PRO=0;QA=346;QR=3932;RO=107;RPL=0;RPP=22.5536;RPPR=235.358;RPR=9;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=235.358;SRR=107;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:23,3:23:802:3:108:-2.24715,0,-64.6491 0/0:15:14,1:14:529:1:39:0,-0.618885,-44.0526 0/1:22:18,4:18:657:4:160:-8.16135,0,-52.8309 0/0:13:13,0:13:469:0:0:0,-3.91339,-42.5392 0/0:20:20,0:20:736:0:0:0,-6.0206,-66.5602 0/0:20:19,1:19:739:1:39:0,-2.12404,-62.9418 dDocent_Contig_6785 26 . A C 4335.68 . AB=0.183319;ABP=1005.62;AC=1;AF=0.0833333;AN=12;AO=251;CIGAR=1X3M1X;DP=4213;DPB=4213;DPRA=2.24912;EPP=548.05;EPPR=8224.2;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.22045e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9892;QR=148844;RO=3786;RPL=0;RPP=548.05;RPPR=8224.2;RPR=251;RUN=1;SAF=251;SAP=548.05;SAR=0;SRF=3786;SRP=8224.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:496:471,0,24:471:18513:0,24:0,950:0,-141.785,-1664.46,-63.6159,-1586.28,-1579.05 0|0:492:476,0,16:476:18714:0,16:0,629:0,-143.29,-1682.56,-91.1653,-1630.83,-1626.01 0|0:445:427,0,16:427:16845:0,16:0,642:0,-128.54,-1514.47,-75.6075,-1461.58,-1456.76 0|0:550:550,0,0:550:21696:0,0:0,0:0,-165.566,-1951.03,-165.566,-1951.03,-1951.03 0|0:1079:1037,40,0:1037:40657:40,0:1584,0:0,-181.811,-3513.06,-312.168,-3525.1,-3655.47 0|1:1151:825,211,113:825:32419:211,113:8308,4440:-435.091,0,-2602.87,-318.308,-2301.26,-2950.68 dDocent_Contig_6787 77 . G T 377.254 . AB=0.139165;ABP=571.863;AC=2;AF=0.166667;AN=12;AO=113;CIGAR=1X;DP=1973;DPB=1973;DPRA=0.695758;EPP=248.387;EPPR=4041.95;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998925;PAO=0;PQA=0;PQR=0;PRO=0;QA=3475;QR=65575;RO=1860;RPL=113;RPP=248.387;RPPR=4041.95;RPR=0;RUN=1;SAF=113;SAP=248.387;SAR=0;SRF=1860;SRP=4041.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:343:327,16:327:11508:16:503:0,-57.6804,-989.985 0/1:364:309,55:309:10930:55:1633:-37.6542,0,-873.997 0/1:139:124,15:124:4363:15:498:-3.28928,0,-350.979 0/0:302:275,27:275:9667:27:841:0,-14.9361,-793.964 0/0:395:395,0:395:13930:0:0:0,-118.907,-1253.43 0/0:430:430,0:430:15177:0:0:0,-129.443,-1365.6 dDocent_Contig_6788 23 . T A 1092.48 . AB=0.212;ABP=183.121;AC=1;AF=0.0833333;AN=12;AO=72;CIGAR=1X;DP=1399;DPB=1399;DPRA=0.753584;EPP=159.356;EPPR=2884.55;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.999246;PAO=0;PQA=0;PQR=0;PRO=0;QA=2807;QR=53026;RO=1327;RPL=0;RPP=159.356;RPPR=2884.55;RPR=72;RUN=1;SAF=72;SAP=159.356;SAR=0;SRF=1327;SRP=2884.55;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:173:172,1:172:6888:1:41:0,-47.9836,-615.499 0/0:197:196,1:196:7774:1:41:0,-55.2083,-695.171 0/0:256:256,0:256:10292:0:0:0,-77.0637,-925.575 0/0:221:204,17:204:8141:17:660:0,-6.80384,-672.51 0/1:250:197,53:197:7804:53:2065:-110.771,0,-626.702 0/0:302:302,0:302:12127:0:0:0,-90.9111,-1090.55 dDocent_Contig_6789 8 . A C 580.367 . AB=0.183246;ABP=169.463;AC=3;AF=0.25;AN=12;AO=42;CIGAR=1X;DP=366;DPB=366;DPRA=1.15556;EPP=94.2121;EPPR=706.567;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.895062;PAO=0;PQA=0;PQR=0;PRO=0;QA=1600;QR=12283;RO=324;RPL=0;RPP=94.2121;RPPR=706.567;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=324;SRP=706.567;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:29,5:29:1114:5:195:-7.68918,0,-90.3283 0/0:45:42,3:42:1569:3:117:0,-2.63597,-130.569 0/1:91:73,18:73:2812:18:673:-33.5074,0,-225.86 0/1:66:54,12:54:2035:12:462:-22.0619,0,-163.514 0/0:76:72,4:72:2706:4:153:0,-8.73667,-229.587 0/0:54:54,0:54:2047:0:0:0,-16.2556,-184.47 dDocent_Contig_6790 87 . C A 6651.9 . AB=0.43937;ABP=23.2854;AC=3;AF=0.25;AN=12;AO=306;CIGAR=1X;DP=1611;DPB=1611;DPRA=0.580145;EPP=667.481;EPPR=2836.78;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.999234;PAO=0;PQA=0;PQR=0;PRO=0;QA=10496;QR=44647;RO=1305;RPL=306;RPP=667.481;RPPR=2836.78;RPR=0;RUN=1;SAF=306;SAP=667.481;SAR=0;SRF=1305;SRP=2836.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:151:97,54:97:3317:54:1850:-121.328,0,-253.307 0/1:256:140,116:140:4777:116:3979:-281.257,0,-353.054 0/0:193:176,17:176:6038:17:588:0,-4.8525,-490.32 0/1:228:119,109:119:4075:109:3736:-267.827,0,-298.327 0/0:413:413,0:413:14133:0:0:0,-124.325,-1271.85 0/0:370:360,10:360:12307:10:343:0,-80.1794,-1076.37 dDocent_Contig_6791 107 . N A 211.136 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=9.4572;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=231;QR=0;RO=0;RPL=0;RPP=18.2106;RPPR=0;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:7:0,7:0:0:7:231:-21.1136,-2.10721,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6792 20 . C G 4949.28 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=9;CIGAR=2M1X7M;DP=1035;DPB=992.2;DPRA=0;EPP=22.5536;EPPR=1694.59;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.988447;PAO=0;PQA=0;PQR=0;PRO=0;QA=348;QR=30673;RO=779;RPL=0;RPP=22.5536;RPPR=1694.59;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=779;SRP=1694.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:141:106,32,0:106:4141:32,0:1242,0:-70.149,0,-330.816,-102.058,-340.449,-442.479 0|0:212:137,75,0:137:5380:75,0:2833,0:-191.283,0,-420.29,-232.524,-442.867,-675.008 0|0:139:124,13,0:124:4924:13,0:499,0:-3.67564,0,-401.518,-41.0034,-405.432,-446.383 0|0:274:192,68,0:192:7591:68,0:2650,0:-159.975,0,-604.221,-217.773,-624.691,-842.466 0|0:119:84,34,0:84:3291:34,0:1274,0:-79.0656,0,-260.427,-104.352,-270.662,-374.976 0|0:150:136,0,9:136:5346:0,9:0,348:0,-40.9401,-480.667,-12.3552,-452.09,-449.38 dDocent_Contig_6793 21 . G A 478.755 . AB=0.142857;ABP=266.689;AC=1;AF=0.0833333;AN=12;AO=68;CIGAR=2X;DP=1198;DPB=1198;DPRA=1.00402;EPP=150.67;EPPR=2443.75;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998227;PAO=0;PQA=0;PQR=0;PRO=0;QA=2680;QR=44313;RO=1128;RPL=0;RPP=150.67;RPPR=2452.43;RPR=68;RUN=1;SAF=68;SAP=150.67;SAR=0;SRF=1127;SRP=2443.75;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:141:135,4:135:5272:4:163:0,-27.0637,-459.389 0|1:238:204,34:204:7991:34:1342:-49.3984,0,-647.201 0|0:277:264,13:264:10445:13:519:0,-36.329,-892.376 0|0:183:177,6:177:6914:6:239:0,-33.2033,-600.136 0|0:199:199,0:199:7833:0:0:0,-59.905,-704.616 0|0:160:149,11:149:5858:11:417:0,-10.2933,-489.187 dDocent_Contig_6794 11 . G A 33.5946 . AB=0.0935252;ABP=202.489;AC=1;AF=0.0833333;AN=12;AO=38;CIGAR=1X;DP=1053;DPB=1053;DPRA=1.71218;EPP=85.5263;EPPR=2204.88;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1524;QR=40536;RO=1014;RPL=0;RPP=85.5263;RPPR=2204.88;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=1014;SRP=2204.88;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:139:126,13:126:5035:13:512:-4.58112,0,-411.184 0/0:168:168,0:168:6740:0:0:0,-50.573,-606.302 0/0:70:70,0:70:2790:0:0:0,-21.0721,-251.211 0/0:158:153,5:153:6092:5:204:0,-28.8187,-529.317 0/0:262:249,12:249:9962:12:488:0,-34.7071,-851.676 0/0:256:248,8:248:9917:8:320:0,-47.896,-862.748 dDocent_Contig_6796 7 . A G 5669.54 . AB=0.0251799;ABP=1091.81;AC=0;AF=0;AN=12;AO=14;CIGAR=1X1M1X2M2X1M3X2M1X;DP=1010;DPB=1010.5;DPRA=0;EPP=33.4109;EPPR=1071.37;GTI=0;LEN=1;MEANALT=9.75;MQM=9;MQMR=60;NS=6;NUMALT=6;ODDS=0;PAIRED=1;PAIREDR=0.979675;PAO=0;PQA=0;PQR=0;PRO=0;QA=530;QR=18918;RO=492;RPL=0;RPP=33.4109;RPPR=1071.37;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=492;SRP=1071.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:97:62,1,5,9,2,14,0:62:2346:1,5,9,2,14,0:39,191,360,71,553,0:-26.8743,-45.0367,-237.066,-44.3899,-236.19,-235.191,-15.8618,-207.71,-207.04,-205.507,-39.7526,-231.583,-230.912,-202.432,-231.487,0,-191.865,-191.195,-162.711,-186.586,-188.156,-45.5381,-237.367,-236.696,-208.216,-232.089,-192.37,-237.873 0|0:166:86,1,27,0,12,26,0:86:3309:1,27,0,12,26,0:40,1060,0,467,1046,0:-60.374,-85.7561,-357.183,-73.4587,-344.634,-337.013,-86.2625,-357.484,-345.141,-357.991,-47.8606,-319.098,-306.758,-319.606,-315.993,0,-271.271,-258.935,-271.778,-233.39,-263.951,-86.2625,-357.484,-345.141,-357.991,-319.606,-271.778,-357.991 0|0:115:59,11,5,0,17,16,0:59:2289:11,5,0,17,16,0:420,198,0,647,644,0:-35.3642,-47.5763,-232.366,-48.7141,-231.263,-235.324,-53.1249,-235.677,-236.829,-241.245,-0.0130563,-182.606,-183.756,-188.171,-183.053,0,-182.595,-183.745,-188.16,-135.081,-183.343,-53.1249,-235.677,-236.829,-241.245,-188.171,-188.16,-241.245 0|0:178:92,1,10,32,25,6,0:92:3541:1,10,32,25,6,0:31,381,1282,959,238,0:-77.9545,-105.145,-395.59,-102.224,-392.448,-389.942,0,-290.267,-287.332,-281.139,-26.9178,-317.172,-314.237,-212.051,-310.152,-86.0551,-376.299,-373.362,-271.18,-298.086,-374.998,-105.649,-395.891,-392.953,-290.772,-317.677,-376.804,-396.396 0|0:213:119,0,0,0,49,40,0:119:4584:0,0,0,49,40,0:0,0,0,1886,1586,0:-119.025,-154.848,-531.231,-154.848,-531.231,-531.231,-154.848,-531.231,-531.231,-531.231,0,-376.38,-376.38,-376.38,-361.629,-24.3077,-400.694,-400.694,-400.694,-245.842,-388.653,-154.848,-531.231,-531.231,-531.231,-376.38,-400.694,-531.231 0|0:241:74,0,5,0,54,85,23:74:2849:0,5,0,54,85,23:0,195,0,2067,3408,873:-258.519,-280.795,-514.711,-278.447,-512.36,-510.855,-280.795,-514.711,-512.36,-514.711,-111.17,-345.086,-342.738,-345.086,-328.831,0,-233.925,-231.578,-233.925,-64.296,-208.338,-209.213,-443.129,-440.78,-443.129,-273.505,-162.343,-436.206 dDocent_Contig_6798 28 . C T 154.083 . AB=0.0945626;ABP=606.962;AC=2;AF=0.166667;AN=12;AO=62;CIGAR=1X;DP=1131;DPB=1131;DPRA=1.06369;EPP=137.642;EPPR=2276.67;GTI=0;LEN=1;MEANALT=1.4;MQM=59.4516;MQMR=43.635;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.810913;PAO=0;PQA=0;PQR=0;PRO=0;QA=2443;QR=42351;RO=1063;RPL=0;RPP=137.642;RPPR=2311.29;RPR=62;RUN=1;SAF=62;SAP=137.642;SAR=0;SRF=1059;SRP=2276.67;SRR=4;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:156:142,13:142:5680:13:517:-0.101996,0,-398.007 0/1:267:240,27:240:9556:27:1078:-16.9302,0,-649.635 0/0:136:125,11:125:4940:11:421:0,-2.70305,-340.209 0/0:215:202,10:202:8041:10:386:0,-29.6927,-628.624 0/0:179:177,0:177:7078:0:0:0,-53.2823,-563.43 0/0:178:177,1:177:7056:1:41:0,-49.5003,-546.786 dDocent_Contig_6800 1 . N G 2798.15 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=90;CIGAR=1X;DP=90;DPB=90;DPRA=0;EPP=198.443;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=38.8111;MQMR=0;NS=6;NUMALT=1;ODDS=3.38813e-21;PAIRED=0.866667;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3587;QR=0;RO=0;RPL=0;RPP=198.443;RPPR=0;RPR=90;RUN=1;SAF=90;SAP=198.443;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:26:0,26:0:0:26:1039:-89.2786,-7.82678,0 1/1:19:0,19:0:0:19:752:-63.7944,-5.71957,0 1/1:7:0,7:0:0:7:281:-16.4794,-2.10721,0 1/1:23:0,23:0:0:23:929:-79.1693,-6.92369,0 1/1:5:0,5:0:0:5:199:-17.6545,-1.50515,0 1/1:10:0,10:0:0:10:387:-12.5936,-3.0103,0 dDocent_Contig_6801 39 . G A 6979.51 . AB=0.539648;ABP=9.20904;AC=6;AF=0.5;AN=12;AO=245;CIGAR=1X;DP=454;DPB=454;DPRA=0;EPP=535.021;EPPR=454.677;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.534694;PAIREDR=0.692308;PAO=0;PQA=0;PQR=0;PRO=0;QA=9379;QR=8290;RO=208;RPL=0;RPP=535.021;RPPR=454.677;RPR=245;RUN=1;SAF=245;SAP=535.021;SAR=0;SRF=208;SRP=454.677;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:66:37,29:37:1485:29:1061:-75.9134,0,-114.027 0/1:88:34,54:34:1334:54:2110:-163.615,0,-93.8321 0/1:46:17,29:17:682:29:1122:-87.4274,0,-47.861 0/1:100:51,49:51:2018:49:1893:-140.496,0,-151.71 0/1:54:19,34:19:759:34:1292:-100.514,0,-52.581 0/1:100:50,50:50:2012:50:1901:-141.206,0,-151.169 dDocent_Contig_6802 25 . C G 36.4127 . AB=0.0921053;ABP=222.672;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=1109;DPB=1109;DPRA=0.794148;EPP=33.4109;EPPR=2378.6;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=562;QR=43556;RO=1094;RPL=0;RPP=33.4109;RPPR=2378.6;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=1094;SRP=2378.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:231:231,0:231:9177:0:0:0,-69.5379,-825.38 0/0:242:242,0:242:9648:0:0:0,-72.8493,-867.728 0/1:152:138,14:138:5431:14:562:-5.16405,0,-442.875 0/0:209:209,0:209:8303:0:0:0,-62.9153,-746.808 0/0:81:81,0:81:3222:0:0:0,-24.3834,-290.05 0/0:194:193,0:193:7775:0:0:0,-58.0988,-698.906 dDocent_Contig_6803 59 . A C 133.528 . AB=0.13913;ABP=133.091;AC=1;AF=0.0833333;AN=12;AO=40;CIGAR=1X;DP=718;DPB=718;DPRA=1.43182;EPP=89.8692;EPPR=1475.27;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.3;PAIREDR=0.482301;PAO=0;PQA=0;PQR=0;PRO=0;QA=1323;QR=22764;RO=678;RPL=40;RPP=89.8692;RPPR=1475.27;RPR=0;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=678;SRP=1475.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:115:99,16:99:3324:16:543:-14.5746,0,-264.779 0/0:108:102,6:102:3411:6:190:0,-15.1009,-289.813 0/0:68:67,1:67:2247:1:35:0,-16.9714,-198.998 0/0:163:148,15:148:4995:15:495:0,-4.20398,-404.872 0/0:88:88,0:88:2929:0:0:0,-26.4906,-263.855 0/0:176:174,2:174:5858:2:60:0,-47.2823,-521.682 dDocent_Contig_6804 77 . T G 3039.28 . AB=0.218254;ABP=524.267;AC=5;AF=0.416667;AN=12;AO=177;CIGAR=1X;DP=904;DPB=904;DPRA=0;EPP=387.361;EPPR=1579.5;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.99435;PAIREDR=0.998623;PAO=0;PQA=0;PQR=0;PRO=0;QA=6417;QR=26647;RO=726;RPL=177;RPP=387.361;RPPR=1579.5;RPR=0;RUN=1;SAF=177;SAP=387.361;SAR=0;SRF=726;SRP=1579.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:74:59,15:59:2143:15:546:-27.2016,0,-170.852 0/1:110:62,48:62:2257:48:1732:-123.043,0,-170.267 0/1:212:160,51:160:6060:51:1850:-103.15,0,-481.741 0/0:148:136,12:136:4985:12:428:0,-5.69529,-409.904 0/1:173:152,21:152:5491:21:762:-16.8264,0,-442.206 0/1:187:157,30:157:5711:30:1099:-42.9286,0,-457.782 dDocent_Contig_6805 22 . A C 128.005 . AB=0.105882;ABP=232.369;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=641;DPB=641;DPRA=0.713904;EPP=46.4397;EPPR=1342.82;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8003;NS=6;NUMALT=1;ODDS=0;PAIRED=0.95;PAIREDR=0.930757;PAO=0;PQA=0;PQR=0;PRO=0;QA=806;QR=24638;RO=621;RPL=0;RPP=46.4397;RPPR=1351.49;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=620;SRP=1342.82;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:72:66,6:66:2615:6:243:-0.573437,0,-213.821 0/0:93:93,0:93:3688:0:0:0,-27.9958,-331.955 0/1:98:86,12:86:3458:12:483:-14.3207,0,-276.786 0/0:97:95,2:95:3721:2:80:0,-21.6083,-327.33 0/0:146:146,0:146:5769:0:0:0,-43.9504,-519.056 0/0:135:135,0:135:5387:0:0:0,-40.639,-484.693 dDocent_Contig_6806 98 . N G 71.3926 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=68;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:18:-1.79997,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 1/1:3:0,3:0:0:3:43:-4.01328,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6807 43 . G A 79.1733 . AB=0.166667;ABP=31.9633;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=180;DPB=180;DPRA=1.05085;EPP=18.2106;EPPR=378.675;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.714286;PAIREDR=0.716763;PAO=0;PQA=0;PQR=0;PRO=0;QA=280;QR=6867;RO=173;RPL=0;RPP=18.2106;RPPR=378.675;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=173;SRP=378.675;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:30,2:30:1156:2:79:0,-2.13572,-96.8257 0/0:19:19,0:19:758:0:0:0,-5.71957,-68.5427 0/0:7:7,0:7:281:0:0:0,-2.10721,-25.6626 0/1:30:25,5:25:1008:5:201:-9.4402,0,-81.9829 0/0:30:30,0:30:1177:0:0:0,-9.0309,-106.2 0/0:62:62,0:62:2487:0:0:0,-18.6639,-223.964 dDocent_Contig_6808 193 . C T 355.031 . AB=0.16129;ABP=157.465;AC=3;AF=0.25;AN=12;AO=28;CIGAR=1X2M1X;DP=355;DPB=355;DPRA=1.04561;EPP=63.8115;EPPR=691.474;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.984615;PAO=0;PQA=0;PQR=0;PRO=0;QA=1077;QR=12533;RO=325;RPL=28;RPP=63.8115;RPPR=708.739;RPR=0;RUN=1;SAF=0;SAP=63.8115;SAR=28;SRF=2;SRP=691.474;SRR=323;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:48:47,1:47:1827:1:40:0,-10.4538,-160.671 0|0:95:93,2:93:3558:2:78:0,-21.1945,-312.915 0|1:45:38,7:38:1489:7:260:-10.2057,0,-120.727 0|1:41:35,6:35:1334:6:240:-9.63401,0,-107.996 0|1:69:57,12:57:2159:12:459:-20.8852,0,-173.751 0|0:57:55,0:55:2166:0:0:0,-16.5566,-194.753 dDocent_Contig_6809 98 . N A 174278 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=5872;CIGAR=1X;DP=5882;DPB=5882;DPRA=0;EPP=12753.9;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=193679;QR=0;RO=0;RPL=5872;RPP=12753.9;RPPR=0;RPR=0;RUN=1;SAF=5872;SAP=12753.9;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:838:0,835:0:0:835:27577:-2481.33,-251.36,0 1/1:922:0,922:0:0:922:30315:-2727.82,-277.55,0 1/1:639:0,639:0:0:639:21253:-1912.48,-192.358,0 1/1:1014:0,1012:0:0:1012:33473:-3011.73,-304.642,0 1/1:1273:0,1272:0:0:1272:41814:-3762.35,-382.91,0 1/1:1196:0,1192:0:0:1192:39247:-3531.34,-358.828,0 dDocent_Contig_6810 98 . N T 170.304 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=171;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:36:-3.59827,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:100:-9.33012,-0.90309,0 dDocent_Contig_6812 89 . C A 428.328 . AB=0.2875;ABP=34.3881;AC=1;AF=0.0833333;AN=12;AO=32;CIGAR=1X;DP=512;DPB=512;DPRA=0.984496;EPP=72.4974;EPPR=1045.32;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8125;PAIREDR=0.73125;PAO=0;PQA=0;PQR=0;PRO=0;QA=1067;QR=15722;RO=480;RPL=17;RPP=3.28173;RPPR=4.81986;RPR=15;RUN=1;SAF=17;SAP=3.28173;SAR=15;SRF=230;SRP=4.81986;SRR=250;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:89:84,5:84:2725:5:171:0,-11.0652,-229.772 0/0:105:105,0:105:3506:0:0:0,-31.6081,-315.772 0/0:50:50,0:50:1602:0:0:0,-15.0515,-144.458 0/0:103:103,0:103:3323:0:0:0,-31.0061,-299.299 0/0:85:81,4:81:2690:4:139:0,-12.7349,-229.502 0/1:80:57,23:57:1876:23:757:-44.3557,0,-145.033 dDocent_Contig_6813 16 . T C 735.571 . AB=0.176991;ABP=207.821;AC=2;AF=0.166667;AN=12;AO=42;CIGAR=1X;DP=572;DPB=572;DPRA=1.27888;EPP=94.2121;EPPR=1153.89;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1681;QR=21155;RO=530;RPL=0;RPP=94.2121;RPPR=1153.89;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=530;SRP=1153.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:88:88,0:88:3520:0:0:0,-26.4906,-316.823 0/0:95:93,2:93:3724:2:79:0,-21.1006,-327.671 0/1:112:91,21:91:3616:21:834:-41.6577,0,-291.743 0/1:114:95,19:95:3815:19:768:-35.1213,0,-309.031 0/0:95:95,0:95:3793:0:0:0,-28.5978,-341.371 0/0:68:68,0:68:2687:0:0:0,-20.47,-241.957 dDocent_Contig_6814 124 . G C 546.809 . AB=0.2;ABP=155.448;AC=5;AF=0.416667;AN=12;AO=40;CIGAR=1X;DP=221;DPB=221;DPRA=0;EPP=89.8692;EPPR=396.047;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.775;PAIREDR=0.834254;PAO=0;PQA=0;PQR=0;PRO=0;QA=1378;QR=6261;RO=181;RPL=40;RPP=89.8692;RPPR=396.047;RPR=0;RUN=1;SAF=0;SAP=89.8692;SAR=40;SRF=0;SRP=396.047;SRR=181;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:25,1:25:829:1:35:0,-4.32815,-71.4159 0/1:44:36,8:36:1248:8:279:-12.2037,0,-99.3787 0/1:35:30,5:30:1048:5:168:-4.91485,0,-84.0966 0/1:43:36,7:36:1253:7:233:-8.35097,0,-100.131 0/1:36:32,4:32:1115:4:139:-2.01561,0,-89.8229 0/1:37:22,15:22:768:15:524:-36.3528,0,-58.3042 dDocent_Contig_6815 10 . A C 2488.03 . AB=0.127877;ABP=1884.16;AC=3;AF=0.25;AN=12;AO=270;CIGAR=1X;DP=3620;DPB=3620;DPRA=0.882212;EPP=589.308;EPPR=7273.1;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10849;QR=133588;RO=3348;RPL=0;RPP=589.308;RPPR=7273.1;RPR=270;RUN=1;SAF=270;SAP=589.308;SAR=0;SRF=3348;SRP=7273.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:520:440,80:440:17602:80:3237:-134.843,0,-1426.19 0/0:636:582,52:582:23262:52:2086:0,-3.34562,-1903.64 0/1:401:339,62:339:13504:62:2481:-102.711,0,-1093.64 0/1:643:585,58:585:23367:58:2332:-16.4705,0,-1907.45 0/0:669:669,0:669:26637:0:0:0,-201.389,-2394.99 0/0:751:733,18:733:29216:18:713:0,-161.58,-2562.32 dDocent_Contig_6816 22 . A T 4983.54 . AB=0.139184;ABP=2554.09;AC=4;AF=0.333333;AN=12;AO=318;CIGAR=1X1M14D1M;DP=3820;DPB=3339.76;DPRA=0;EPP=693.539;EPPR=6906.12;GTI=0;LEN=1;MEANALT=11;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.22045e-16;PAIRED=1;PAIREDR=0.999371;PAO=0;PQA=0;PQR=0;PRO=0;QA=12612;QR=123950;RO=3179;RPL=0;RPP=693.539;RPPR=6906.12;RPR=318;RUN=1;SAF=318;SAP=693.539;SAR=0;SRF=3179;SRP=6906.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:461:354,73,27:354:13764:73,27:2878,971:-130.244,0,-1109.12,-157.606,-1051.89,-1280.53 0|1:711:564,103,34:564:21908:103,34:4100,1208:-167.843,0,-1769.15,-239.212,-1701.74,-2029.09 0|1:519:458,46,6:458:17870:46,6:1838,185:-13.5813,0,-1455.14,-136.627,-1454.15,-1603.73 0|1:565:398,92,64:398:15557:92,64:3637,2156:-179.492,0,-1251.35,-124.654,-1104.38,-1384.38 0|0:865:763,0,91:763:29801:0,91:0,3040:-16.4148,-246.101,-2696,0,-2449.95,-2422.56 0|0:699:642,4,42:642:25050:4,42:159,1481:0,-180.167,-2238.1,-72.6741,-2118.75,-2119.19 dDocent_Contig_6817 98 . N T 166.249 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=7;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=165;QR=0;RO=0;RPL=7;RPP=18.2106;RPPR=0;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:41:-3.89396,-0.60206,0 1/1:1:0,1:0:0:1:24:-2.39989,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:18:-1.79997,-0.30103,0 1/1:2:0,1:0:0:1:18:-1.66997,-0.30103,0 1/1:2:0,2:0:0:2:64:-6.07855,-0.60206,0 dDocent_Contig_6818 1 . N G 74.9833 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=79;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:79:-7.49724,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_6820 39 . G C 5849.22 . AB=0.0492958;ABP=754.646;AC=0;AF=0;AN=12;AO=21;CIGAR=1M1X1M;DP=666;DPB=745.667;DPRA=0;EPP=48.6112;EPPR=873.771;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=806;QR=15460;RO=401;RPL=0;RPP=48.6112;RPPR=873.771;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=401;SRP=873.771;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:138:111,23,4:111:4278:23,4:846,162:-35.7159,0,-344.329,-55.7665,-337.894,-405.848 0|0:73:47,20,6:47:1823:20,6:714,211:-44.0461,0,-143.788,-41.0226,-132.639,-189.014 0|0:121:63,48,8:63:2456:48,8:1791,311:-127.662,0,-187.446,-121.067,-176.338,-320.538 0|0:94:65,26,3:65:2502:26,3:981,122:-60.8034,0,-197.574,-70.3041,-195.336,-274.828 0|0:104:49,51,0:49:1877:51,0:1866,0:-137.706,0,-138.68,-152.457,-154.033,-306.498 0|0:136:66,69,0:66:2524:69,0:2567,0:-190.21,0,-186.335,-210.078,-207.107,-417.187 dDocent_Contig_6821 51 . G T 354.43 . AB=0.152866;ABP=167.337;AC=2;AF=0.166667;AN=12;AO=24;CIGAR=1X;DP=446;DPB=446;DPRA=1.08651;EPP=55.1256;EPPR=919.372;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.916667;PAIREDR=0.952607;PAO=0;PQA=0;PQR=0;PRO=0;QA=947;QR=16594;RO=422;RPL=24;RPP=55.1256;RPPR=919.372;RPR=0;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=422;SRP=919.372;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:69:69,0:69:2735:0:0:0,-20.7711,-246.277 0/0:83:83,0:83:3271:0:0:0,-24.9855,-294.464 0/0:48:48,0:48:1885:0:0:0,-14.4494,-169.855 0/0:89:89,0:89:3430:0:0:0,-26.7917,-308.756 0/1:91:77,14:77:3050:14:547:-22.1753,0,-247.201 0/1:66:56,10:56:2223:10:400:-16.4896,0,-180.377 dDocent_Contig_6822 46 . C T 576.233 . AB=0.132353;ABP=402.178;AC=1;AF=0.0833333;AN=12;AO=202;CIGAR=1X;DP=3449;DPB=3449;DPRA=0;EPP=441.648;EPPR=1837.03;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7958;QR=126457;RO=3243;RPL=202;RPP=441.648;RPPR=1837.03;RPR=0;RUN=1;SAF=202;SAP=441.648;SAR=0;SRF=3243;SRP=7045.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:402:379,21:379:14621:21:837:0,-45.0231,-1239.32 0/0:596:576,20:576:22541:20:760:0,-110.713,-1958.25 0/1:340:295,45:295:11507:45:1792:-59.1462,0,-932.563 0/0:612:592,19:592:23057:19:746:0,-116.564,-2005.91 0/0:596:564,32:564:22002:32:1264:0,-65.3812,-1864.46 0/0:903:837,65:837:32729:65:2559:0,-41.1664,-2712.45 dDocent_Contig_6823 52 . G T 3018.29 . AB=0.192208;ABP=636.618;AC=1;AF=0.0833333;AN=12;AO=217;CIGAR=1X;DP=4435;DPB=4435;DPRA=1.23426;EPP=474.22;EPPR=8990.73;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.999758;PAO=0;PQA=0;PQR=0;PRO=0;QA=8566;QR=163204;RO=4139;RPL=217;RPP=474.22;RPPR=8990.73;RPR=0;RUN=1;SAF=217;SAP=474.22;SAR=0;SRF=4139;SRP=8990.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:510:505,0:505:19781:0:0:0,-152.02,-1778.32 0/0:704:700,0:700:27553:0:0:0,-210.721,-2477.03 0/0:771:758,0:758:29940:0:0:0,-228.181,-2691.6 0/0:769:727,21:727:28733:21:822:0,-151.277,-2509.17 0/1:770:594,148:594:23420:148:5859:-303.352,0,-1882.1 0/0:911:855,48:855:33777:48:1885:0,-102.381,-2867.09 dDocent_Contig_6824 37 . G A 117.753 . AB=0.0947867;ABP=303.939;AC=2;AF=0.166667;AN=12;AO=29;CIGAR=2X3M1X;DP=657;DPB=657;DPRA=0.784351;EPP=65.983;EPPR=1292.86;GTI=0;LEN=1;MEANALT=2.25;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.758621;PAIREDR=0.927609;PAO=0;PQA=0;PQR=0;PRO=0;QA=1148;QR=23089;RO=594;RPL=0;RPP=65.983;RPPR=1292.86;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=594;SRP=1292.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:97:84,8,5:84:3236:8,5:320,203:-1.0699,0,-263.249,-9.61173,-248.914,-273.77 0|0:133:124,6,0:124:4886:6,0:239,0:0,-17.6457,-417.805,-37.3277,-419.612,-439.293 0|0:67:60,3,4:60:2308:3,4:121,160:0,-8.08614,-196.632,-4.88394,-184.354,-193.125 0|1:114:96,12,6:96:3685:12,6:468,240:-9.56234,0,-298.808,-18.6878,-282.65,-319.312 0|0:115:104,0,11:104:4057:0,11:0,441:-5.42638,-36.7335,-370.195,0,-333.861,-330.55 0|0:131:126,0,5:126:4917:0,5:0,203:0,-37.9298,-442.087,-20.7819,-425.344,-423.839 dDocent_Contig_6825 1 . N G 75.9266 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=80;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:80:-7.59157,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6826 18 . T A 53.7684 . AB=0.0958904;ABP=106.557;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=2M1X12M;DP=568;DPB=569.8;DPRA=0.687059;EPP=18.2106;EPPR=1140.86;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=274;QR=20308;RO=524;RPL=0;RPP=18.2106;RPPR=1140.86;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=524;SRP=1140.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:76:74,2,0:74:2878:2,0:73,0:0,-15.9491,-252.241,-22.2762,-252.843,-258.805 0|0:85:83,1,0:83:3223:1,0:38,0:0,-21.8838,-286.382,-24.9855,-286.683,-289.8 0|0:176:165,5,0:165:6429:5,0:177,0:0,-35.2549,-562.191,-49.6699,-563.696,-578.104 0|0:88:79,7,0:79:3026:7,0:279,0:0,-0.682468,-247.039,-23.7814,-249.146,-272.124 0|0:70:61,7,0:61:2367:7,0:278,0:-4.64968,0,-192.51,-23.0125,-194.617,-217.505 0|1:73:62,2,7:62:2385:2,7:57,274:-3.94788,-18.0993,-213.313,0,-191.386,-193.801 dDocent_Contig_6827 42 . C A 2473.15 . AB=0.225564;ABP=351.034;AC=6;AF=0.5;AN=12;AO=120;CIGAR=1X2M1X;DP=532;DPB=532;DPRA=0;EPP=19.2963;EPPR=869.513;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.884521;PAO=0;PQA=0;PQR=0;PRO=0;QA=4618;QR=16144;RO=407;RPL=0;RPP=263.587;RPPR=869.513;RPR=120;RUN=1;SAF=45;SAP=19.2963;SAR=75;SRF=407;SRP=886.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:67:54,13:54:2143:13:488:-24.0941,0,-172.89 0|1:116:85,31:85:3355:31:1210:-74.2675,0,-267.1 0|1:79:53,26:53:2127:26:998:-66.3475,0,-167.829 0|1:107:83,19:83:3314:19:748:-36.5705,0,-267.254 0|1:81:59,22:59:2315:22:844:-51.8964,0,-184.135 0|1:82:73,9:73:2890:9:330:-5.3612,0,-235.531 dDocent_Contig_6828 98 . N A 1319.61 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=44;CIGAR=1X;DP=44;DPB=44;DPRA=0;EPP=98.5551;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1442;QR=0;RO=0;RPL=44;RPP=98.5551;RPPR=0;RPR=0;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:129:-11.9294,-1.20412,0 1/1:22:0,22:0:0:22:753:-68.0883,-6.62266,0 1/1:15:0,15:0:0:15:488:-44.2298,-4.51545,0 1/1:2:0,2:0:0:2:37:-3.51486,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_6829 24 . A G 5947.77 . AB=0.169085;ABP=1904.36;AC=6;AF=0.5;AN=12;AO=338;CIGAR=1X;DP=1999;DPB=1999;DPRA=0;EPP=736.968;EPPR=3607.65;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.989157;PAO=0;PQA=0;PQR=0;PRO=0;QA=13409;QR=65300;RO=1660;RPL=0;RPP=736.968;RPPR=3607.65;RPR=338;RUN=1;SAF=338;SAP=736.968;SAR=0;SRF=1660;SRP=3607.65;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:320:266,54:266:10554:54:2149:-97.2563,0,-852.884 0/1:358:288,70:288:11258:70:2756:-140.39,0,-904.777 0/1:275:232,42:232:9177:42:1688:-69.2916,0,-742.571 0/1:371:323,48:323:12660:48:1922:-61.4977,0,-1026.91 0/1:243:169,74:169:6603:74:2911:-188.942,0,-520.886 0/1:432:382,50:382:15048:50:1983:-48.6215,0,-1223.2 dDocent_Contig_6830 36 . T A 495.926 . AB=0.146552;ABP=254.751;AC=1;AF=0.0833333;AN=12;AO=61;CIGAR=1X;DP=1011;DPB=1011;DPRA=0.74486;EPP=135.47;EPPR=2065.91;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995789;PAO=0;PQA=0;PQR=0;PRO=0;QA=2425;QR=37830;RO=950;RPL=0;RPP=135.47;RPPR=2065.91;RPR=61;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=950;SRP=2065.91;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:180:168,12:168:6693:12:476:0,-10.9953,-558.888 0/1:232:198,34:198:7908:34:1341:-51.1155,0,-641.458 0/0:109:108,1:108:4270:1:41:0,-28.7177,-380.157 0/0:214:214,0:214:8509:0:0:0,-64.4204,-765.332 0/0:106:100,6:100:3973:6:244:0,-9.57056,-335.208 0/0:170:162,8:162:6477:8:323:0,-21.7365,-553.202 dDocent_Contig_6831 30 . G C 1617.65 . AB=0.206718;ABP=292.142;AC=4;AF=0.333333;AN=12;AO=86;CIGAR=1X;DP=633;DPB=633;DPRA=0;EPP=189.757;EPPR=1186.46;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998165;PAO=0;PQA=0;PQR=0;PRO=0;QA=3384;QR=21657;RO=545;RPL=0;RPP=189.757;RPPR=1186.46;RPR=86;RUN=1;SAF=86;SAP=189.757;SAR=0;SRF=545;SRP=1186.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:52:50,2:50:1996:2:79:0,-8.15631,-172.337 0/1:62:52,9:52:2068:9:362:-14.1805,0,-167.542 0/1:65:51,14:51:2044:14:551:-30.3573,0,-164.581 0/1:70:59,11:59:2340:11:447:-19.514,0,-189.681 0/1:190:143,46:143:5645:46:1797:-104.935,0,-450.888 0/0:194:190,4:190:7564:4:148:0,-44.7209,-666.688 dDocent_Contig_6832 39 . T A 1818.19 . AB=0.265734;ABP=139.342;AC=4;AF=0.333333;AN=12;AO=76;CIGAR=1X;DP=329;DPB=329;DPRA=3.32558;EPP=168.042;EPPR=550.221;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3044;QR=10086;RO=252;RPL=0;RPP=168.042;RPPR=550.221;RPR=76;RUN=1;SAF=76;SAP=168.042;SAR=0;SRF=252;SRP=550.221;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:450:0:0:0,-3.61236,-40.8295 0/1:59:37,22:37:1476:22:878:-61.5657,0,-115.319 0/1:59:42,17:42:1687:17:691:-44.7575,0,-134.289 0/1:62:35,26:35:1391:26:1038:-74.9444,0,-106.682 0/0:31:31,0:31:1255:0:0:0,-9.33193,-113.216 0/1:106:95,11:95:3827:11:437:-7.77311,0,-312.498 dDocent_Contig_6833 47 . G C 415.743 . AB=0.068323;ABP=263.6;AC=0;AF=0;AN=12;AO=21;CIGAR=7M1X8M;DP=1117;DPB=1077.94;DPRA=0.754023;EPP=48.6112;EPPR=2128.88;GTI=0;LEN=1;MEANALT=5.33333;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.996936;PAO=0;PQA=0;PQR=0;PRO=0;QA=817;QR=38031;RO=979;RPL=0;RPP=48.6112;RPPR=2128.88;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=979;SRP=2128.88;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:149:129,0,0,8,6:129:4954:0,0,8,6:0,0,292,241:0,-38.8329,-445.449,-38.8329,-445.449,-445.449,-14.9982,-421.601,-421.601,-419.193,-18.9671,-425.589,-425.589,-401.742,-423.783 0|0:182:166,1,0,8,4:166:6426:1,0,8,4:38,0,314,158:0,-46.8538,-574.391,-49.971,-574.692,-577.809,-24.127,-548.87,-551.986,-549.578,-36.9613,-561.691,-564.807,-538.985,-563.603 0|0:290:263,0,0,18,0:263:10188:0,0,18,0:0,0,720,0:0,-79.1709,-916.079,-79.1709,-916.079,-916.079,-19.8287,-856.771,-856.771,-851.353,-79.1709,-916.079,-916.079,-856.771,-916.079 0|0:161:124,22,0,0,11:124:4831:22,0,0,11:845,0,0,418:-32.0433,0,-390.45,-69.371,-397.072,-466.431,-69.371,-397.072,-466.431,-466.431,-35.0962,-362.8,-432.159,-432.159,-428.847 0|0:145:132,0,10,0,0:132:5186:0,10,0,0:0,357,0,0:0,-39.736,-466.354,-10.5105,-437.26,-434.249,-39.736,-466.354,-437.26,-466.354,-39.736,-466.354,-437.26,-466.354,-466.354 0|0:190:165,0,21,1,0:165:6446:0,21,1,0:0,764,41,0:-12.7528,-62.4228,-592.371,0,-529.981,-523.66,-59.0365,-588.986,-526.597,-588.685,-62.4228,-592.371,-529.981,-588.986,-592.371 dDocent_Contig_6834 23 . G A 201.624 . AB=0.230769;ABP=27.5646;AC=1;AF=0.0833333;AN=12;AO=22;CIGAR=1X;DP=367;DPB=367;DPRA=1.04202;EPP=50.7827;EPPR=752.168;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=888;QR=13624;RO=345;RPL=0;RPP=50.7827;RPPR=752.168;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=345;SRP=752.168;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:39:30,9:30:1211:9:364:-21.3842,0,-97.5223 0/0:48:46,2:46:1813:2:78:0,-7.04614,-155.984 0/0:71:67,4:67:2640:4:162:0,-6.40617,-222.768 0/0:90:83,7:83:3326:7:284:0,-1.15891,-273.46 0/0:53:53,0:53:2095:0:0:0,-15.9546,-188.721 0/0:66:66,0:66:2539:0:0:0,-19.868,-228.649 dDocent_Contig_6835 15 . G A 3086.58 . AB=0.235099;ABP=371.154;AC=2;AF=0.166667;AN=12;AO=142;CIGAR=1X;DP=1304;DPB=1304;DPRA=1.72571;EPP=311.359;EPPR=2524.09;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.992958;PAIREDR=0.969854;PAO=0;PQA=0;PQR=0;PRO=0;QA=5482;QR=44069;RO=1161;RPL=0;RPP=311.359;RPPR=2524.09;RPR=142;RUN=1;SAF=142;SAP=311.359;SAR=0;SRF=1161;SRP=2524.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:125:125,0:125:4699:0:0:0,-37.6287,-422.959 0/0:232:232,0:232:8775:0:0:0,-69.839,-789.498 0/0:114:114,0:114:4301:0:0:0,-34.3174,-387.133 0/0:229:229,0:229:8788:0:0:0,-68.9359,-790.608 0/1:273:215,57:215:8192:57:2172:-113.537,0,-654.882 0/1:331:246,85:246:9314:85:3310:-198.342,0,-738.28 dDocent_Contig_6836 23 . G T 11628.8 . AB=0.456647;ABP=5.83447;AC=4;AF=0.333333;AN=12;AO=344;CIGAR=1X;DP=747;DPB=747;DPRA=1.45724;EPP=749.997;EPPR=878.114;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.997093;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13729;QR=15984;RO=403;RPL=0;RPP=749.997;RPPR=878.114;RPR=344;RUN=1;SAF=344;SAP=749.997;SAR=0;SRF=403;SRP=878.114;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:78:61,17:61:2426:17:680:-38.0481,0,-194.999 0/0:119:119,0:119:4708:0:0:0,-35.8226,-423.635 0/0:11:11,0:11:425:0:0:0,-3.31133,-38.5888 0/0:174:174,0:174:6920:0:0:0,-52.3792,-622.48 0/1:95:33,62:33:1318:62:2445:-191.597,0,-90.2813 1/1:270:5,265:5:187:265:10604:-936.46,-64.0932,0 dDocent_Contig_6837 106 . N A 432.092 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=25;CIGAR=2X;DP=25;DPB=25;DPRA=0;EPP=57.2971;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=19.64;MQMR=0;NS=4;NUMALT=1;ODDS=3.38813e-21;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=778;QR=0;RO=0;RPL=0;RPP=57.2971;RPPR=0;RPR=25;RUN=1;SAF=0;SAP=57.2971;SAR=25;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:5:0,5:0:0:5:132:-8.69651,-1.50515,0 1|1:5:0,5:0:0:5:156:-9.15311,-1.50515,0 1|1:9:0,9:0:0:9:288:-15.2836,-2.70927,0 1|1:6:0,6:0:0:6:202:-9.47392,-1.80618,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_6838 100 . T C 146.987 . AB=0.169492;ABP=58.9901;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=150;DPB=150;DPRA=1.17391;EPP=26.8965;EPPR=304.845;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.909091;PAIREDR=0.834532;PAO=0;PQA=0;PQR=0;PRO=0;QA=419;QR=5491;RO=139;RPL=11;RPP=26.8965;RPPR=304.845;RPR=0;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=304.845;SRR=139;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:832:0:0:0,-6.32163,-75.1976 0/0:22:21,1:21:839:1:38:0,-2.82539,-72.0276 0/0:10:10,0:10:403:0:0:0,-3.0103,-36.6302 0/0:38:38,0:38:1492:0:0:0,-11.4391,-134.52 0/1:37:29,8:29:1134:8:300:-16.2132,0,-91.2049 0/1:22:20,2:20:791:2:81:-1.06307,0,-64.8904 dDocent_Contig_6839 51 . T A 1254.53 . AB=0.133652;ABP=979.903;AC=1;AF=0.0833333;AN=12;AO=166;CIGAR=1X;DP=4294;DPB=4294;DPRA=0.86926;EPP=363.475;EPPR=8945.13;GTI=0;LEN=1;MEANALT=2.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.998786;PAO=0;PQA=0;PQR=0;PRO=0;QA=6233;QR=151618;RO=4118;RPL=166;RPP=363.475;RPPR=8945.13;RPR=0;RUN=1;SAF=166;SAP=363.475;SAR=0;SRF=4118;SRP=8945.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:575:572,2:572:20784:2:81:0,-165.513,-1861.84 0/0:734:733,0:733:26800:0:0:0,-220.655,-2410.39 0/0:426:423,1:423:15676:1:7:0,-127.062,-1409.33 0/0:834:833,0:833:30855:0:0:0,-250.758,-2775.12 0/1:838:722,112:722:26720:112:4202:-126.976,0,-2152.12 0/0:887:835,51:835:30783:51:1943:0,-92.0469,-2593.65 dDocent_Contig_6840 19 . C T 127.191 . AB=0.10219;ABP=379.642;AC=2;AF=0.166667;AN=12;AO=51;CIGAR=1X;DP=743;DPB=743;DPRA=1.54824;EPP=113.755;EPPR=1505.67;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.882353;PAIREDR=0.966763;PAO=0;PQA=0;PQR=0;PRO=0;QA=1991;QR=26955;RO=692;RPL=0;RPP=113.755;RPPR=1505.67;RPR=51;RUN=1;SAF=51;SAP=113.755;SAR=0;SRF=692;SRP=1505.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:125:122,3:122:4712:3:120:0,-26.4411,-412.884 0/1:136:123,13:123:4814:13:496:-4.04179,0,-392.291 0/0:85:85,0:85:3271:0:0:0,-25.5875,-294.493 0/0:141:130,11:130:5089:11:428:0,-3.57048,-419.07 0/0:118:109,9:109:4259:9:357:0,-3.02876,-350.828 0/1:138:123,15:123:4810:15:590:-11.8985,0,-391.332 dDocent_Contig_6841 55 . C A 2556.34 . AB=0.32;ABP=31.1526;AC=2;AF=0.166667;AN=12;AO=32;CIGAR=10M1X;DP=207;DPB=220.818;DPRA=0;EPP=72.4974;EPPR=94.755;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.90625;PAIREDR=0.828125;PAO=0;PQA=0;PQR=0;PRO=0;QA=1243;QR=2518;RO=64;RPL=32;RPP=72.4974;RPPR=94.755;RPR=0;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=64;SRP=141.985;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:33:13,9,10,0:13:512:9,10,0:352,401,0:-29.1367,-4.1097,-43.5248,0,-13.1885,-39.12,-33.0501,-46.2341,-42.1303,-75.1732 0|0:49:17,11,19,0:17:667:11,19,0:425,721,0:-53.9893,-24.2111,-75.7584,0,-19.9648,-49.1369,-59.1068,-79.0697,-54.8564,-113.964 0|0:25:10,9,6,0:10:397:9,6,0:360,208,0:-26.6762,0,-30.0052,-12.8102,-15.8357,-43.6855,-29.6865,-32.7144,-45.4917,-62.3769 0|0:29:11,9,3,6:11:429:9,3,6:352,114,230:-25.6313,0,-32.5586,-19.5949,-25.92,-53.9563,-10.0741,-16.399,-35.9908,-43.5323 0|1:25:6,11,0,8:6:238:11,0,8:393,0,314:-36.4206,-6.22524,-22.5071,-38.2268,-25.8185,-57.8241,-12.3911,0,-31.9964,-29.5882 0|1:46:7,20,0,18:7:275:20,0,18:760,0,699:-95.0019,-34.8007,-51.4001,-97.1091,-57.4207,-119.729,-39.6813,0,-62.3032,-56.8847 dDocent_Contig_6842 62 . G A 258.457 . AB=0.155963;ABP=115.07;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=602;DPB=602;DPRA=2.47584;EPP=42.0968;EPPR=1271.15;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=703;QR=22404;RO=584;RPL=18;RPP=42.0968;RPPR=1271.15;RPR=0;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=584;SRP=1271.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:65:65,0:65:2470:0:0:0,-19.5669,-222.458 0/0:40:40,0:40:1471:0:0:0,-12.0412,-132.675 0/0:67:67,0:67:2548:0:0:0,-20.169,-229.478 0/0:97:97,0:97:3752:0:0:0,-29.1999,-337.752 0/1:109:92,17:92:3580:17:665:-27.3686,0,-289.468 0/0:224:223,1:223:8583:1:38:0,-63.6334,-768.342 dDocent_Contig_6843 10 . T A 326.086 . AB=0.103226;ABP=214.96;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1M1X13M;DP=208;DPB=209.2;DPRA=0;EPP=39.9253;EPPR=343.931;GTI=0;LEN=1;MEANALT=2.8;MQM=60;MQMR=60;NS=6;NUMALT=6;ODDS=0;PAIRED=1;PAIREDR=0.993631;PAO=0;PQA=0;PQR=0;PRO=0;QA=648;QR=6172;RO=157;RPL=0;RPP=39.9253;RPPR=343.931;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=157;SRP=343.931;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:30:13,4,0,2,1,6,4:13:515:4,0,2,1,6,4:149,0,81,41,235,142:-15.4154,-7.13542,-48.327,-19.3288,-49.5311,-61.7248,-12.6464,-42.8507,-55.0444,-54.4424,-15.9429,-46.1463,-58.34,-51.6595,-58.0389,0,-30.2076,-42.4008,-35.7199,-39.0157,-40.5946,-7.77167,-37.9724,-50.1647,-43.4845,-46.7799,-30.842,-48.9606 0|1:33:30,0,0,0,0,3,0:30:1181:0,0,0,0,3,0:0,0,0,0,117,0:-0.975842,-10.0067,-107.165,-10.0067,-107.165,-107.165,-10.0067,-107.165,-107.165,-107.165,-10.0067,-107.165,-107.165,-107.165,-107.165,0,-97.5479,-97.5479,-97.5479,-97.5479,-96.6448,-10.0067,-107.165,-107.165,-107.165,-107.165,-97.5479,-107.165 0|0:33:28,3,0,2,0,0,0:28:1099:3,0,2,0,0,0:114,0,77,0,0,0:-0.917347,0,-89.4856,-9.34619,-90.3887,-99.7368,-3.02181,-84.0668,-93.4148,-92.8128,-9.34619,-90.3887,-99.7368,-93.4148,-99.7368,-9.34619,-90.3887,-99.7368,-93.4148,-99.7368,-99.7368,-9.34619,-90.3887,-99.7368,-93.4148,-99.7368,-99.7368,-99.7368 0|0:40:23,0,0,0,3,6,8:23:912:0,0,0,3,6,8:0,0,0,118,224,325:-19.8942,-26.8179,-101.893,-26.8179,-101.893,-101.893,-26.8179,-101.893,-101.893,-101.893,-17.111,-92.1862,-92.1862,-92.1862,-91.2831,-8.49379,-83.562,-83.562,-83.562,-73.8558,-81.7558,0,-75.0842,-75.0842,-75.0842,-65.3774,-56.754,-72.676 0|0:52:44,1,5,0,0,1,0:44:1721:1,5,0,0,1,0:37,191,0,0,34,0:-2.48582,-12.7007,-153.935,0,-138.565,-140.087,-15.7311,-154.237,-141.592,-157.263,-15.7311,-154.237,-141.592,-157.263,-157.263,-12.974,-151.479,-138.835,-154.506,-154.506,-154.205,-15.7311,-154.237,-141.592,-157.263,-157.263,-154.506,-157.263 0|0:20:19,0,0,0,0,1,0:19:744:0,0,0,0,1,0:0,0,0,0,38,0:0,-5.71957,-66.9072,-5.71957,-66.9072,-66.9072,-5.71957,-66.9072,-66.9072,-66.9072,-5.71957,-66.9072,-66.9072,-66.9072,-66.9072,-2.22333,-63.7913,-63.7913,-63.7913,-63.7913,-63.4902,-5.71957,-66.9072,-66.9072,-66.9072,-66.9072,-63.7913,-66.9072 dDocent_Contig_6844 69 . A T 80.8961 . AB=0.185185;ABP=26.2531;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=181;DPB=181;DPRA=0.876623;EPP=13.8677;EPPR=385.189;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=193;QR=6750;RO=176;RPL=5;RPP=13.8677;RPPR=385.189;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=176;SRP=385.189;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1372:0:0:0,-10.536,-123.735 0/0:26:26,0:26:1003:0:0:0,-7.82678,-90.5649 0/0:34:34,0:34:1274:0:0:0,-10.235,-114.914 0/0:20:20,0:20:786:0:0:0,-6.0206,-71.0581 0/0:39:39,0:39:1495:0:0:0,-11.7402,-134.789 0/1:27:22,5:22:820:5:193:-9.61249,0,-65.9677 dDocent_Contig_6845 28 . A G 1569.93 . AB=0.0292135;ABP=859.698;AC=0;AF=0;AN=12;AO=13;CIGAR=2M2X;DP=743;DPB=769;DPRA=0.611264;EPP=31.2394;EPPR=1353.67;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=516;QR=24305;RO=622;RPL=0;RPP=31.2394;RPPR=1353.67;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=622;SRP=1353.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:65:45,14,6:45:1754:14,6:474,238:-23.1991,0,-139.942,-17.1325,-124.564,-159.537 0|0:116:93,17,3:93:3653:17,3:655,121:-25.813,0,-295.378,-43.8299,-290.521,-343.389 0|0:123:102,20,1:102:3949:20,1:780,40:-33.3904,0,-318.33,-60.7999,-321.056,-384.86 0|0:141:103,34,3:103:4011:34,3:1264,117:-71.8554,0,-319.388,-93.2425,-320.005,-421.979 0|0:182:176,6,0:176:6885:6,0:228,0:0,-33.9071,-598.543,-52.9813,-600.349,-619.043 0|0:116:103,13,0:103:4053:13,0:517,0:-11.9572,0,-329.869,-42.9633,-333.782,-376.349 dDocent_Contig_6846 98 . N A 3350.5 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=102;CIGAR=1X;DP=102;DPB=102;DPRA=0;EPP=224.5;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3697;QR=0;RO=0;RPL=102;RPP=224.5;RPPR=0;RPR=0;RUN=1;SAF=102;SAP=224.5;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:22:0,22:0:0:22:790:-71.4223,-6.62266,0 1/1:10:0,10:0:0:10:359:-32.6511,-3.0103,0 1/1:24:0,24:0:0:24:866:-78.2585,-7.22472,0 1/1:39:0,39:0:0:39:1433:-129.264,-11.7402,0 1/1:7:0,7:0:0:7:249:-22.7545,-2.10721,0 ./.:.:.:.:.:.:.:. dDocent_Contig_6847 84 . G A 51391.1 . AB=0.686233;ABP=849.822;AC=6;AF=0.5;AN=12;AO=1929;CIGAR=1X4M;DP=2811;DPB=2811;DPRA=0;EPP=4191.78;EPPR=1664.19;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.999482;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=66259;QR=25793;RO=765;RPL=1929;RPP=4191.78;RPPR=1664.19;RPR=0;RUN=1;SAF=1929;SAP=4191.78;SAR=0;SRF=765;SRP=1664.19;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:524:142,10,369:142:4786:10,369:328,12603:-980.07,-996.316,-1381.16,0,-361.377,-276.797 0|1:496:126,8,360:126:4265:8,360:270,12246:-955.487,-971.533,-1314.92,0,-323.942,-237.455 0|1:334:102,0,230:102:3414:0,230:0,7951:-615.458,-646.163,-922.614,0,-276.547,-207.31 0|1:422:89,11,318:89:3050:11,318:369,11038:-870.542,-867.445,-1111.75,0,-217.767,-151.928 0|1:583:191,14,375:191:6378:14,375:448,12813:-982.394,-1003.8,-1515.92,0,-480.256,-403.464 0|1:452:115,55,277:115:3900:55,277:1830,9608:-746.384,-632.913,-932.62,0,-168.185,-232.89 dDocent_Contig_6848 1 . N G 76.8682 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6849 35 . C A 286.892 . AB=0.159292;ABP=116.945;AC=1;AF=0.0833333;AN=12;AO=23;CIGAR=2X;DP=531;DPB=531;DPRA=1.10526;EPP=52.9542;EPPR=1103.95;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.956522;PAIREDR=0.887574;PAO=0;PQA=0;PQR=0;PRO=0;QA=913;QR=20162;RO=507;RPL=0;RPP=52.9542;RPPR=1103.95;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=507;SRP=1103.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:82:82,0:82:3208:0:0:0,-24.6845,-288.801 0|0:86:86,0:86:3439:0:0:0,-25.8886,-309.547 0|0:97:97,0:97:3890:0:0:0,-29.1999,-350.094 0|0:77:76,0:76:3032:0:0:0,-22.8783,-272.56 0|1:113:95,18:95:3777:18:710:-30.2121,0,-305.934 0|0:76:71,5:71:2816:5:203:0,-4.22522,-234.908 dDocent_Contig_6850 11 . T A 1010.04 . AB=0.114754;ABP=81.6461;AC=0;AF=0;AN=12;AO=7;CIGAR=2M1X3M;DP=170;DPB=169.667;DPRA=1.525;EPP=18.2106;EPPR=248.387;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.823009;PAO=0;PQA=0;PQR=0;PRO=0;QA=274;QR=4446;RO=113;RPL=0;RPP=18.2106;RPPR=248.387;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=113;SRP=248.387;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:26:15,2,0,9,0:15:580:2,0,9,0:78,0,344,0:-23.7041,-21.8064,-68.845,-28.2195,-69.447,-75.8592,0,-41.2228,-47.635,-44.9257,-28.2195,-69.447,-75.8592,-47.635,-75.8592 0|0:30:15,0,0,12,3:15:595:0,0,12,3:0,0,459,123:-33.1269,-37.6423,-86.6265,-37.6423,-86.6265,-86.6265,0,-48.9689,-48.9689,-45.3565,-27.4846,-76.4723,-76.4723,-38.8144,-75.5692 0|0:31:19,0,2,6,4:19:752:0,2,6,4:0,78,228,151:-12.9779,-18.6974,-80.5985,-12.2839,-74.1867,-73.5846,0,-61.9026,-55.491,-60.0964,-6.32455,-68.2257,-61.8141,-49.5308,-67.0216 0|0:33:22,0,0,10,0:22:869:0,0,10,0:0,0,388,0:-25.2376,-31.8602,-103.373,-31.8602,-103.373,-103.373,0,-71.4953,-71.4953,-68.485,-31.8602,-103.373,-103.373,-71.4953,-103.373 0|0:30:23,0,0,7,0:23:898:0,0,7,0:0,0,265,0:-15.1792,-22.1029,-95.9313,-22.1029,-95.9313,-95.9313,0,-74.2095,-74.2095,-72.1023,-22.1029,-95.9313,-95.9313,-74.2095,-95.9313 0|0:20:19,0,0,1,0:19:752:0,0,1,0:0,0,34,0:0,-5.71957,-67.6642,-5.71957,-67.6642,-67.6642,-2.62169,-64.909,-64.909,-64.608,-5.71957,-67.6642,-67.6642,-64.909,-67.6642 dDocent_Contig_6851 98 . N A 289.354 . AB=0;ABP=0;AC=10;AF=0.833333;AN=12;AO=11;CIGAR=1X;DP=12;DPB=12;DPRA=2.2;EPP=26.8965;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=298;QR=0;RO=0;RPL=11;RPP=26.8965;RPPR=0;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:79:-7.37077,-0.90309,0 1/1:1:0,1:0:0:1:11:-1.09999,-0.30103,0 1/1:4:0,4:0:0:4:117:-10.8198,-1.20412,0 1/1:1:0,1:0:0:1:30:-2.99957,-0.30103,0 1/1:2:0,2:0:0:2:61:-5.79376,-0.60206,0 0/0:1:0,0:0:0:0:0:0,0,0 dDocent_Contig_6852 81 . G C 2891.92 . AB=0.261649;ABP=278.359;AC=4;AF=0.333333;AN=12;AO=154;CIGAR=1X;DP=815;DPB=815;DPRA=1.22982;EPP=337.417;EPPR=1436.18;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=59.6727;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.987013;PAIREDR=0.987879;PAO=0;PQA=0;PQR=0;PRO=0;QA=5418;QR=23178;RO=660;RPL=154;RPP=337.417;RPPR=1436.18;RPR=0;RUN=1;SAF=154;SAP=337.417;SAR=0;SRF=660;SRP=1436.18;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:126:82,43:82:2891:43:1514:-98.5743,0,-222.454 0/1:152:120,32:120:4195:32:1129:-56.1611,0,-331.98 0/1:133:88,45:88:3105:45:1571:-101.641,0,-235.103 0/1:147:121,26:121:4240:26:933:-40.0378,0,-337.532 0/0:114:114,0:114:4033:0:0:0,-34.3174,-363.165 0/0:143:135,8:135:4714:8:271:0,-18.329,-397.757 dDocent_Contig_6853 98 . N A 1052.62 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=34;CIGAR=1X;DP=34;DPB=34;DPRA=0;EPP=76.8404;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0882353;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1139;QR=0;RO=0;RPL=34;RPP=76.8404;RPPR=0;RPR=0;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:15:0,15:0:0:15:503:-45.5905,-4.51545,0 1/1:7:0,7:0:0:7:240:-21.9351,-2.10721,0 1/1:6:0,6:0:0:6:195:-17.8689,-1.80618,0 1/1:2:0,2:0:0:2:63:-5.98344,-0.60206,0 1/1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 dDocent_Contig_6854 98 . N C 97.6533 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=98;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:67:-6.36304,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_6855 12 . T C 1562.85 . AB=0.125186;ABP=821.791;AC=5;AF=0.416666;AN=12;AO=93;CIGAR=1X4M;DP=833;DPB=833;DPRA=0;EPP=204.957;EPPR=1516.53;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.989247;PAIREDR=0.978479;PAO=0;PQA=0;PQR=0;PRO=0;QA=3688;QR=27705;RO=697;RPL=0;RPP=204.957;RPPR=1516.53;RPR=93;RUN=1;SAF=93;SAP=204.957;SAR=0;SRF=697;SRP=1516.53;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:121:91,0,28:91:3648:0,28:0,1122:-65.0398,-92.4335,-392.986,0,-300.553,-292.125 0|1:152:125,22,5:125:5003:22,5:858,171:-32.9282,0,-405.563,-56.6976,-398.32,-467.331 0|1:90:71,0,15:71:2819:0,15:0,593:-27.4178,-48.7909,-280.852,0,-232.058,-227.542 0|0:162:147,6,9:147:5835:6,9:241,359:0,-24.3919,-502.912,-14.6882,-475.154,-492.303 0|1:185:154,0,22:154:6077:0,22:0,873:-25.5065,-71.8651,-571.854,0,-499.995,-493.372 0|1:123:109,0,14:109:4323:0,14:0,570:-14.6149,-47.4272,-403.256,0,-356.234,-352.02 dDocent_Contig_6856 27 . G C 28450.1 . AB=0.3413;ABP=689.478;AC=5;AF=0.416667;AN=12;AO=1112;CIGAR=1X;DP=3749;DPB=3749;DPRA=0;EPP=2417.69;EPPR=5720.5;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=59.9947;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99924;PAO=0;PQA=0;PQR=0;PRO=0;QA=43892;QR=104305;RO=2633;RPL=0;RPP=2417.69;RPPR=5720.5;RPR=1112;RUN=1;SAF=1112;SAP=2417.69;SAR=0;SRF=2633;SRP=5720.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:540:344,196:344:13554:196:7726:-532.4,0,-1056.33 0/1:829:536,293:536:21282:293:11464:-781.452,0,-1664.02 0/1:547:354,193:354:14022:193:7656:-523.988,0,-1096.25 0/1:667:424,241:424:16803:241:9548:-658.153,0,-1310.38 0/0:611:569,41:569:22465:41:1658:0,-34.5945,-1870.54 0/1:555:406,148:406:16179:148:5840:-358.238,0,-1287.67 dDocent_Contig_6857 62 . A T 46.454 . AB=0.0834646;ABP=959.966;AC=1;AF=0.0833333;AN=12;AO=79;CIGAR=1X;DP=4495;DPB=4495;DPRA=1.23018;EPP=174.557;EPPR=9540.12;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.998634;PAO=0;PQA=0;PQR=0;PRO=0;QA=3129;QR=175416;RO=4392;RPL=79;RPP=174.557;RPPR=9540.12;RPR=0;RUN=1;SAF=79;SAP=174.557;SAR=0;SRF=4392;SRP=9540.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:725:724,1:724:28894:1:41:0,-214.152,-2593.76 0/0:799:775,24:775:30967:24:961:0,-153.733,-2697.41 0/0:414:413,0:413:16458:0:0:0,-124.325,-1479.52 0/1:635:559,53:559:22356:53:2118:-6.16827,0,-1825.47 0/0:1037:1036,1:1036:41437:1:9:0,-311.268,-3724.52 0/0:885:885,0:885:35304:0:0:0,-266.412,-3174.07 dDocent_Contig_6858 45 . A G 3274.1 . AB=0.214876;ABP=515.657;AC=3;AF=0.25;AN=12;AO=176;CIGAR=1X;DP=1637;DPB=1637;DPRA=0;EPP=385.189;EPPR=3164.68;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990411;PAO=0;PQA=0;PQR=0;PRO=0;QA=6912;QR=58342;RO=1460;RPL=0;RPP=385.189;RPPR=3164.68;RPR=176;RUN=1;SAF=176;SAP=385.189;SAR=0;SRF=1460;SRP=3173.36;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:249:212,37:212:8478:37:1426:-53.6209,0,-687.588 0/0:266:249,17:249:9970:17:671:0,-19.3555,-835.933 0/1:265:197,68:197:7893:68:2664:-160.097,0,-630.164 0/1:212:160,51:160:6356:51:2028:-118.914,0,-507.984 0/0:300:299,1:299:11956:1:41:0,-86.2144,-1071.1 0/0:345:343,2:343:13689:2:82:0,-96.0757,-1223.18 dDocent_Contig_6859 15 . G C 64159.9 . AB=0.686622;ABP=907.516;AC=6;AF=0.5;AN=12;AO=2053;CIGAR=1X;DP=2990;DPB=2990;DPRA=0;EPP=4461.04;EPPR=2031.17;GTI=0;LEN=1;MEANALT=1.5;MQM=59.7155;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.991232;PAIREDR=0.994647;PAO=0;PQA=0;PQR=0;PRO=0;QA=81602;QR=36748;RO=934;RPL=0;RPP=4461.04;RPPR=2031.17;RPR=2053;RUN=1;SAF=2053;SAP=4461.04;SAR=0;SRF=934;SRP=2031.17;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:598:147,450:147:5809:450:17846:-1424.48,0,-342.495 0/1:643:137,506:137:5428:506:20154:-1613.26,0,-294.814 0/1:333:55,278:55:2142:278:11050:-890.926,0,-92.7177 0/1:554:181,372:181:7156:372:14749:-1158.76,0,-476.865 0/1:544:315,228:315:12402:228:9076:-652.407,0,-951.515 0/1:318:99,219:99:3811:219:8727:-687.392,0,-247.303 dDocent_Contig_6860 195 . C T 284.298 . AB=0.131737;ABP=199.73;AC=1;AF=0.0833333;AN=12;AO=31;CIGAR=1X;DP=710;DPB=710;DPRA=1.47188;EPP=70.3259;EPPR=1477.44;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1207;QR=27130;RO=679;RPL=31;RPP=70.3259;RPPR=1477.44;RPR=0;RUN=1;SAF=0;SAP=70.3259;SAR=31;SRF=0;SRP=1477.44;SRR=679;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:67:67,0:67:2672:0:0:0,-20.169,-240.592 0/0:134:125,9:125:4987:9:319:0,-11.3065,-419.666 0/0:106:106,0:106:4243:0:0:0,-31.9092,-381.804 0/0:90:90,0:90:3590:0:0:0,-27.0927,-323.12 0/1:167:145,22:145:5780:22:888:-29.9526,0,-469.711 0/0:146:146,0:146:5858:0:0:0,-43.9504,-526.994 dDocent_Contig_6861 49 . G A 179.233 . AB=0.192982;ABP=49.6779;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X1M1X;DP=292;DPB=292;DPRA=0.418239;EPP=35.5824;EPPR=600.165;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=549;QR=10614;RO=275;RPL=15;RPP=35.5824;RPPR=600.165;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=275;SRP=600.165;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:16:14,1:14:553:1:39:0,-1.01844,-46.2074 0|0:60:57,3:57:2202:3:101:0,-8.63987,-188.95 0|1:29:21,8:21:824:8:309:-19.4404,0,-65.7474 0|1:28:25,3:25:938:3:100:-0.899847,0,-76.2852 0|0:80:79,0:79:3039:0:0:0,-23.7814,-273.228 0|0:79:79,0:79:3058:0:0:0,-23.7814,-275.341 dDocent_Contig_6862 58 . T A 228.819 . AB=0.275;ABP=20.5992;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=115;DPB=115;DPRA=1.06667;EPP=26.8965;EPPR=228.843;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.855769;PAO=0;PQA=0;PQR=0;PRO=0;QA=416;QR=4152;RO=104;RPL=11;RPP=26.8965;RPPR=228.843;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=104;SRP=228.843;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:1012:0:0:0,-7.52575,-91.3729 0/0:13:13,0:13:519:0:0:0,-3.91339,-47.0534 0/1:19:12,7:12:477:7:277:-19.5776,0,-37.5589 0/0:20:20,0:20:808:0:0:0,-6.0206,-73.0367 0/1:21:17,4:17:675:4:139:-6.52621,0,-54.7585 0/0:17:17,0:17:661:0:0:0,-5.11751,-59.8173 dDocent_Contig_6863 24 . T A 315.408 . AB=0.195122;ABP=69.2137;AC=1;AF=0.0833333;AN=12;AO=21;CIGAR=1X;DP=278;DPB=278;DPRA=1.43056;EPP=48.6112;EPPR=561.079;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.571429;PAIREDR=0.856031;PAO=0;PQA=0;PQR=0;PRO=0;QA=829;QR=10295;RO=257;RPL=0;RPP=48.6112;RPPR=561.079;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=257;SRP=561.079;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:46:44,2:44:1760:2:74:0,-6.82252,-151.588 0/1:82:66,16:66:2655:16:638:-33.0637,0,-214.384 0/0:45:43,2:43:1735:2:81:0,-5.86062,-148.679 0/0:33:32,1:32:1287:1:36:0,-6.33571,-112.496 0/0:52:52,0:52:2081:0:0:0,-15.6536,-187.472 0/0:20:20,0:20:777:0:0:0,-6.0206,-70.2382 dDocent_Contig_6864 71 . T G 21111.5 . AB=0.248739;ABP=2613.19;AC=6;AF=0.5;AN=12;AO=1184;CIGAR=1X;DP=4760;DPB=4760;DPRA=0;EPP=2574.03;EPPR=7759.51;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999155;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=39496;QR=121854;RO=3572;RPL=1184;RPP=2574.03;RPPR=7759.51;RPR=0;RUN=1;SAF=1184;SAP=2574.03;SAR=0;SRF=3572;SRP=7759.51;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:648:462,185:462:15932:185:6121:-355.918,0,-1238.52 0/1:846:572,273:572:19605:273:9141:-568.024,0,-1509.38 0/1:661:450,211:450:15350:211:7045:-435.187,0,-1182.35 0/1:777:541,235:541:18447:235:7838:-471.561,0,-1426.01 0/1:1021:908,112:908:30692:112:3796:-34.4982,0,-2454.28 0/1:807:639,168:639:21828:168:5555:-257.182,0,-1721.22 dDocent_Contig_6865 16 . T C 44.3488 . AB=0.101266;ABP=112.106;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=576;DPB=576;DPRA=0.88;EPP=22.5536;EPPR=1234.24;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=364;QR=22600;RO=567;RPL=0;RPP=22.5536;RPPR=1234.24;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=567;SRP=1234.24;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:79:71,8:71:2819:8:323:-5.65671,0,-230.039 0/0:70:70,0:70:2838:0:0:0,-21.0721,-255.511 0/0:145:145,0:145:5776:0:0:0,-43.6493,-519.639 0/0:97:96,1:96:3779:1:41:0,-25.1053,-336.03 0/0:104:104,0:104:4133:0:0:0,-31.3071,-371.948 0/0:81:81,0:81:3255:0:0:0,-24.3834,-293.005 dDocent_Contig_6866 49 . T C 7048.6 . AB=0.0268041;ABP=6605.93;AC=0;AF=0;AN=12;AO=118;CIGAR=1M3D8M1X3M;DP=4631;DPB=4615.06;DPRA=0;EPP=259.244;EPPR=7981.04;GTI=0;LEN=1;MEANALT=12.1667;MQM=59.2627;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4559;QR=143852;RO=3690;RPL=0;RPP=259.244;RPPR=7981.04;RPR=118;RUN=1;SAF=118;SAP=259.244;SAR=0;SRF=3690;SRP=8015.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:649:559,18,61,2,0:559:21651:18,61,2,0:688,2330,77,0:-22.9137,-134.74,-1907.85,0,-1722.12,-1760.2,-184.867,-1906.95,-1772.24,-1962.79,-191.189,-1913.27,-1778.56,-1963.39,-1969.72 0|0:784:717,16,45,1,0:717:27916:16,45,1,0:624,1688,41,0:0,-164.546,-2453.97,-77.6064,-2320.55,-2358.3,-212.454,-2455.41,-2368.46,-2506.39,-215.838,-2458.79,-2371.84,-2506.7,-2510.08 0|0:452:412,11,20,0,0:412:16161:11,20,0,0:433,759,0,0:0,-88.3957,-1414.17,-61.7852,-1355.25,-1384.85,-124.024,-1417.48,-1390.87,-1453.1,-124.024,-1417.48,-1390.87,-1453.1,-1453.1 0|0:659:525,45,68,16,0:525:20471:45,68,16,0:1733,2556,638,0:-51.3187,-67.7717,-1736.84,0,-1541.03,-1662.14,-156.817,-1697.85,-1630.07,-1834.62,-209.359,-1750.39,-1682.61,-1839.43,-1891.97 0|0:1198:845,15,0,106,210:845:33013:15,0,106,210:576,0,4059,7947:-396.98,-604.073,-3313.52,-651.35,-3318.03,-3365.31,-318.288,-2984.98,-3032.25,-3000.34,0,-2666.69,-2713.97,-2380.91,-2650.75 0|0:889:632,13,2,135,99:632:24640:13,2,135,99:505,81,5247,3759:-240.87,-389.627,-2410.95,-424.442,-2408.19,-2449.08,0,-1983.75,-2018.56,-1984.6,-122.929,-2106.67,-2141.49,-1717.05,-2118.36 dDocent_Contig_6867 107 . N A 1124.58 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=35;CIGAR=1X;DP=35;DPB=35;DPRA=0;EPP=79.0118;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0.857143;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1222;QR=0;RO=0;RPL=0;RPP=79.0118;RPPR=0;RPR=35;RUN=1;SAF=0;SAP=79.0118;SAR=35;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:9:0,9:0:0:9:321:-29.2335,-2.70927,0 1/1:7:0,7:0:0:7:237:-21.6597,-2.10721,0 1/1:4:0,4:0:0:4:143:-13.2214,-1.20412,0 1/1:8:0,8:0:0:8:273:-24.9011,-2.40824,0 1/1:7:0,7:0:0:7:248:-22.6644,-2.10721,0 ./.:.:.:.:.:.:.:. dDocent_Contig_6868 22 . G C 12904.4 . AB=0.297949;ABP=590.932;AC=6;AF=0.5;AN=12;AO=494;CIGAR=2X3M1X3M;DP=1658;DPB=1658;DPRA=0;EPP=1075.72;EPPR=2037.68;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.997976;PAIREDR=0.996798;PAO=0;PQA=0;PQR=0;PRO=0;QA=19268;QR=36880;RO=937;RPL=0;RPP=1075.72;RPPR=2037.68;RPR=494;RUN=1;SAF=494;SAP=1075.72;SAR=0;SRF=937;SRP=2037.68;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:221:138,8,53,19:138:5396:8,53,19:318,2090,764:-130.414,-145.774,-586.984,0,-417.431,-427.659,-108.995,-526.431,-380.652,-546.894 0|1:192:123,3,59,0:123:4834:3,59,0:120,2290,0:-151.108,-178.249,-574.946,0,-387.701,-379.825,-188.135,-575.849,-397.586,-585.734 0|1:461:241,32,134,47:241:9492:32,134,47:1243,5240,1858:-358.252,-328.671,-1099.9,0,-678.736,-740.527,-277.923,-956.659,-627.989,-1044.64 0|1:193:115,0,71,7:115:4552:0,71,7:0,2769,283:-192.973,-227.591,-602.236,0,-374.635,-353.261,-204.257,-578.903,-351.302,-576.796 0|1:300:163,52,83,0:163:6431:52,83,0:2024,3213,0:-214.853,-97.5893,-611.073,0,-362.808,-504.151,-263.921,-626.726,-529.137,-793.056 0|1:291:157,40,94,0:157:6175:40,94,0:1577,3666,0:-254.059,-171.573,-667.463,0,-378.182,-479.632,-301.321,-679.505,-507.929,-809.251 dDocent_Contig_6871 74 . G A 64723.7 . AB=0.543722;ABP=72.6966;AC=6;AF=0.5;AN=12;AO=2282;CIGAR=1X;DP=4197;DPB=4197;DPRA=0;EPP=4958.31;EPPR=4148.35;GTI=0;LEN=1;MEANALT=2;MQM=59.9895;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=1;PAIREDR=0.999476;PAO=0;PQA=0;PQR=0;PRO=0;QA=86123;QR=71787;RO=1909;RPL=2282;RPP=4958.31;RPPR=4148.35;RPR=0;RUN=1;SAF=2282;SAP=4958.31;SAR=0;SRF=1909;SRP=4148.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:689:383,305:383:14250:305:11175:-797.909,0,-1074.36 0/1:743:361,380:361:13316:380:14068:-1042.11,0,-974.491 0/1:516:254,261:254:9599:261:9971:-741.638,0,-708.269 0/1:602:313,289:313:11894:289:10937:-802.591,0,-888.605 0/1:896:315,579:315:11857:579:21846:-1695.39,0,-797.119 0/1:751:283,468:283:10871:468:18126:-1403.96,0,-751.774 dDocent_Contig_6873 158 . C A 523.036 . AB=0.229358;ABP=72.358;AC=1;AF=0.0833333;AN=12;AO=45;CIGAR=1X;DP=784;DPB=784;DPRA=0.744578;EPP=100.727;EPPR=1126.77;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99458;PAO=0;PQA=0;PQR=0;PRO=0;QA=1678;QR=26899;RO=738;RPL=45;RPP=100.727;RPPR=1126.77;RPR=0;RUN=1;SAF=0;SAP=100.727;SAR=45;SRF=0;SRP=1605.56;SRR=738;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:166:166,0:166:6021:0:0:0,-49.971,-541.891 0/0:135:128,7:128:4704:7:255:0,-17.3406,-400.15 0/1:109:83,25:83:3026:25:957:-53.8264,0,-239.92 0/0:162:152,10:152:5493:10:357:0,-16.3046,-461.936 0/0:96:94,2:94:3472:2:70:0,-22.2527,-305.976 0/0:116:115,1:115:4183:1:39:0,-31.0229,-372.689 dDocent_Contig_6874 64 . A G 232.072 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=29;CIGAR=2M1X5M;DP=1059;DPB=1082.75;DPRA=0;EPP=65.983;EPPR=2146.25;GTI=0;LEN=1;MEANALT=2.2;MQM=59.6897;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=0.896552;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1160;QR=37810;RO=987;RPL=29;RPP=65.983;RPPR=2146.25;RPR=0;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=987;SRP=2146.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:120:113,0,6:113:4310:0,6:0,244:0,-34.0164,-387.564,-13.9074,-367.451,-365.645 0|0:184:173,0,7:173:6668:0,7:0,281:0,-52.0782,-599.648,-28.8228,-576.494,-574.387 0|0:97:93,0,3:93:3581:0,3:0,115:0,-27.9958,-322.087,-18.3314,-312.649,-311.746 0|0:150:139,0,11:139:5344:0,11:0,438:0,-41.8432,-480.535,-5.38201,-444.471,-441.159 0|0:264:261,0,2:261:9945:0,2:0,82:0,-78.5688,-894.29,-71.7808,-887.522,-886.92 0|0:244:208,31,0:208:7962:31,0:1074,0:-24.7301,0,-644.142,-87.3443,-653.474,-740.745 dDocent_Contig_6875 98 . N T 56.9965 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0.5;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=60;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:60:-5.69857,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6876 25 . G A 23406.5 . AB=0.434133;ABP=73.666;AC=6;AF=0.5;AN=12;AO=814;CIGAR=1X;DP=1875;DPB=1875;DPRA=0;EPP=1770.59;EPPR=2306.94;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999057;PAO=0;PQA=0;PQR=0;PRO=0;QA=32414;QR=41985;RO=1061;RPL=0;RPP=1770.59;RPPR=2306.94;RPR=814;RUN=1;SAF=814;SAP=1770.59;SAR=0;SRF=1061;SRP=2306.94;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:245:193,52:193:7687:52:2089:-114.439,0,-617.681 0/1:160:61,99:61:2436:99:3944:-306.783,0,-171.228 0/1:162:39,123:39:1540:123:4896:-391.768,0,-90.0721 0/1:215:161,54:161:6303:54:2130:-127.149,0,-502.308 0/1:616:304,312:304:11976:312:12421:-931.587,0,-891.591 0/1:477:303,174:303:12043:174:6934:-480.148,0,-939.44 dDocent_Contig_6877 64 . A T 34.0439 . AB=0.153846;ABP=30.0702;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=182;DPB=182;DPRA=0.833333;EPP=11.6962;EPPR=389.532;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.842697;PAO=0;PQA=0;PQR=0;PRO=0;QA=138;QR=6945;RO=178;RPL=4;RPP=11.6962;RPPR=389.532;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=178;SRP=389.532;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1046:0:0:0,-8.42884,-94.4266 0/0:25:25,0:25:950:0:0:0,-7.52575,-85.812 0/0:27:27,0:27:1064:0:0:0,-8.12781,-96.0508 0/0:35:35,0:35:1378:0:0:0,-10.536,-124.285 0/0:41:41,0:41:1634:0:0:0,-12.3422,-147.288 0/1:26:22,4:22:873:4:138:-4.9271,0,-71.0487 dDocent_Contig_6878 23 . A T 123.47 . AB=0.148936;ABP=103.637;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X;DP=350;DPB=350;DPRA=0.785915;EPP=50.7827;EPPR=713.082;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996942;PAO=0;PQA=0;PQR=0;PRO=0;QA=732;QR=12763;RO=327;RPL=0;RPP=50.7827;RPPR=713.082;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=327;SRP=713.082;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:49:42,7:42:1664:7:229:-6.17847,0,-135.246 0/1:45:38,7:38:1471:7:251:-9.39033,0,-119.094 0/0:74:68,6:68:2650:6:206:0,-3.40219,-219.774 0/0:46:44,1:44:1709:1:36:0,-10.3228,-150.439 0/0:71:71,0:71:2785:0:0:0,-21.3731,-250.777 0/0:65:64,1:64:2484:1:10:0,-18.567,-222.72 dDocent_Contig_6879 21 . G A 1096.9 . AB=0.170868;ABP=338.919;AC=3;AF=0.25;AN=12;AO=82;CIGAR=1X4M;DP=722;DPB=721.8;DPRA=0;EPP=181.071;EPPR=1305.89;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.536667;PAO=0;PQA=0;PQR=0;PRO=0;QA=3219;QR=23204;RO=600;RPL=0;RPP=181.071;RPPR=1305.89;RPR=82;RUN=1;SAF=82;SAP=181.071;SAR=0;SRF=600;SRP=1305.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:141:125,0,10:125:4799:0,10:0,384:0,-37.6287,-431.535,-6.10018,-400.017,-397.007 0|1:160:136,4,16:136:5266:4,16:160,626:-10.5366,-38.2934,-469.658,0,-419.397,-427.761 0|1:108:79,7,20:79:3083:7,20:282,770:-39.4292,-39.9613,-291.285,0,-230.186,-247.41 0|1:89:57,5,25:57:2211:5,25:200,997:-64.9456,-65.629,-245.762,0,-165.158,-174.109 0|0:123:114,0,8:114:4391:0,8:0,320:0,-34.3174,-394.811,-7.94874,-368.45,-366.042 0|0:101:89,4,3:89:3454:4,3:157,122:0,-13.8828,-296.436,-16.7262,-287.577,-299.586 dDocent_Contig_6880 21 . C G 1252.74 . AB=0.252336;ABP=117.023;AC=2;AF=0.166667;AN=12;AO=66;CIGAR=1X;DP=662;DPB=662;DPRA=0.95815;EPP=146.327;EPPR=1297.21;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2602;QR=23832;RO=596;RPL=0;RPP=146.327;RPPR=1297.21;RPR=66;RUN=1;SAF=66;SAP=146.327;SAR=0;SRF=596;SRP=1297.21;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:113:109,4:109:4365:4:151:0,-20.06,-378.83 0/1:137:95,42:95:3802:42:1650:-107.494,0,-300.931 0/1:77:65,12:65:2598:12:487:-21.0018,0,-210.764 0/0:108:100,8:100:3996:8:314:0,-3.88826,-331.002 0/0:122:122,0:122:4876:0:0:0,-36.7257,-438.719 0/0:105:105,0:105:4195:0:0:0,-31.6081,-377.511 dDocent_Contig_6881 59 . A T 3001.96 . AB=0.292566;ABP=158.862;AC=6;AF=0.5;AN=12;AO=122;CIGAR=1X;DP=417;DPB=417;DPRA=0;EPP=267.93;EPPR=641.423;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.92623;PAIREDR=0.85034;PAO=0;PQA=0;PQR=0;PRO=0;QA=4832;QR=11634;RO=294;RPL=122;RPP=267.93;RPPR=641.423;RPR=0;RUN=1;SAF=122;SAP=267.93;SAR=0;SRF=294;SRP=641.423;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:44:34,9:34:1349:9:353:-19.0613,0,-108.629 0/1:64:48,16:48:1884:16:631:-37.8581,0,-150.502 0/1:55:45,10:45:1783:10:395:-19.3507,0,-144.129 0/1:90:66,24:66:2601:24:959:-59.5189,0,-207.149 0/1:100:64,36:64:2552:36:1432:-99.0317,0,-199.714 0/1:64:37,27:37:1465:27:1062:-76.5968,0,-112.839 dDocent_Contig_6882 18 . G C 53.8022 . AB=0.230769;ABP=11.1951;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=160;DPB=160;DPRA=1.13265;EPP=22.5536;EPPR=330.903;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.854305;PAO=0;PQA=0;PQR=0;PRO=0;QA=353;QR=5875;RO=151;RPL=0;RPP=22.5536;RPPR=330.903;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=151;SRP=330.903;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:25,2:25:966:2:79:0,-0.630565,-79.738 0/0:35:35,0:35:1395:0:0:0,-10.536,-125.81 0/1:13:10,3:10:394:3:116:-6.90289,0,-31.8979 0/0:14:14,0:14:547:0:0:0,-4.21442,-49.5715 0/0:41:39,2:39:1460:2:77:0,-5.03309,-124.336 0/0:30:28,2:28:1113:2:81:0,-1.34517,-92.774 dDocent_Contig_6883 10 . T A 292.629 . AB=0.165138;ABP=109.173;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1X;DP=311;DPB=311;DPRA=1.15426;EPP=52.9542;EPPR=628.394;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=914;QR=11448;RO=288;RPL=0;RPP=52.9542;RPPR=628.394;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=288;SRP=628.394;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:57:52,5:52:2072:5:202:-1.40279,0,-169.507 0/0:56:55,1:55:2150:1:40:0,-12.862,-189.691 0/0:52:48,4:48:1932:4:160:0,-0.870133,-159.293 0/1:52:39,13:39:1560:13:512:-30.7678,0,-124.988 0/0:52:52,0:52:2053:0:0:0,-15.6536,-184.953 0/0:42:42,0:42:1681:0:0:0,-12.6433,-151.52 dDocent_Contig_6884 51 . T C 1463.66 . AB=0.285714;ABP=92.3509;AC=6;AF=0.5;AN=12;AO=64;CIGAR=1X;DP=224;DPB=224;DPRA=0;EPP=141.985;EPPR=350.446;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.390625;PAIREDR=0.60625;PAO=0;PQA=0;PQR=0;PRO=0;QA=2477;QR=6062;RO=160;RPL=64;RPP=141.985;RPPR=350.446;RPR=0;RUN=1;SAF=64;SAP=141.985;SAR=0;SRF=160;SRP=350.446;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:39:21,18:21:818:18:715:-52.9366,0,-62.2032 0/1:45:37,8:37:1406:8:315:-15.1664,0,-113.271 0/1:36:31,5:31:1161:5:191:-6.7191,0,-93.9447 0/1:38:27,11:27:1011:11:387:-23.7119,0,-79.8568 0/1:19:14,5:14:524:5:205:-13.1154,0,-41.78 0/1:47:30,17:30:1142:17:664:-45.9381,0,-88.933 dDocent_Contig_6885 12 . A T 96.7286 . AB=0.133333;ABP=73.0765;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=447;DPB=447;DPRA=0.775194;EPP=20.3821;EPPR=956.287;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.920273;PAO=0;PQA=0;PQR=0;PRO=0;QA=321;QR=17672;RO=439;RPL=0;RPP=20.3821;RPPR=956.287;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=439;SRP=956.287;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:66:66,0:66:2649:0:0:0,-19.868,-238.529 0/0:99:99,0:99:3991:0:0:0,-29.802,-359.163 0/1:60:52,8:52:2105:8:321:-11.1957,0,-171.561 0/0:47:47,0:47:1877:0:0:0,-14.1484,-169.13 0/0:91:91,0:91:3666:0:0:0,-27.3937,-329.944 0/0:84:84,0:84:3384:0:0:0,-25.2865,-304.6 dDocent_Contig_6886 21 . A G 131.69 . AB=0.114286;ABP=183.925;AC=2;AF=0.166667;AN=12;AO=26;CIGAR=1X;DP=615;DPB=615;DPRA=0;EPP=59.4686;EPPR=1282.01;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1047;QR=23428;RO=589;RPL=0;RPP=59.4686;RPPR=1282.01;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=589;SRP=1282.01;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:74:64,10:64:2499:10:403:-14.3527,0,-202.776 0/0:95:93,2:93:3724:2:82:0,-20.8182,-327.387 0/0:177:176,1:176:6975:1:41:0,-49.1877,-623.355 0/1:66:60,6:60:2405:6:236:-1.74084,0,-196.736 0/0:108:104,4:104:4143:4:162:0,-17.5443,-357.875 0/0:95:92,3:92:3682:3:123:0,-17.1331,-319.927 dDocent_Contig_6888 11 . T A 55445.2 . AB=0.604413;ABP=187.568;AC=9;AF=0.75;AN=12;AO=1639;CIGAR=1X3M;DP=2450;DPB=2450;DPRA=0;EPP=3562.05;EPPR=991.03;GTI=0;LEN=1;MEANALT=2.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=65567;QR=18100;RO=455;RPL=0;RPP=3562.05;RPPR=991.03;RPR=1639;RUN=1;SAF=1639;SAP=3562.05;SAR=0;SRF=455;SRP=991.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:328:55,83,190:55:2194:83,190:3299,7574:-698.043,-442.996,-598.698,-90.9152,0,-214.408 0|1:428:155,36,236:155:6182:36,236:1427,9454:-732.172,-661.376,-1159.64,0,-391.646,-438.059 0|1:414:125,72,215:125:4967:72,215:2873,8623:-672.812,-473.836,-861.073,0,-172.306,-344.19 0|1:292:69,61,162:69:2741:61,162:2427,6493:-514.16,-335.103,-542.386,0,-25.8183,-176.88 1|1:501:9,29,461:9:359:29,461:1162,18429:-1624.43,-1531.4,-1552.24,-109.209,-43.0327,0 1|1:487:42,70,375:42:1657:70,375:2749,14994:-1312.12,-1098.68,-1213.94,-89.7534,0,-113.197 dDocent_Contig_6889 10 . T C 26067.5 . AB=0.311653;ABP=685.206;AC=8;AF=0.666667;AN=12;AO=690;CIGAR=1X3M1X1M1I8M;DP=2214;DPB=2200.57;DPRA=0;EPP=1501.33;EPPR=1043.15;GTI=0;LEN=1;MEANALT=9.83333;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=27223;QR=18862;RO=479;RPL=0;RPP=1501.33;RPPR=1043.15;RPR=690;RUN=1;SAF=690;SAP=1501.33;SAR=0;SRF=479;SRP=1043.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:274:92,6,6,61,23,73:92:3593:6,6,61,23,73:240,236,2383,911,2878:-209.089,-217.014,-510.569,-217.371,-492.962,-510.926,-40.8845,-316.474,-316.832,-317.882,-161.803,-437.394,-437.751,-261.264,-450.24,0,-275.591,-275.948,-99.4605,-220.38,-273.386 0|1:431:123,7,17,86,47,132:123:4824:7,17,86,47,132:281,666,3385,1823,5194:-390.221,-404.093,-798.693,-372.483,-746.036,-764.073,-148.795,-522.347,-490.737,-519.613,-277.486,-651.038,-619.428,-395.74,-660.045,0,-373.553,-341.943,-118.254,-246.945,-356.972 0|1:313:80,0,1,73,26,119:80:3178:0,1,73,26,119:0,40,2854,992,4717:-364.184,-388.266,-649.902,-384.971,-646.607,-646.306,-153.638,-415.274,-411.979,-393.299,-306.901,-568.537,-565.241,-333.908,-560.71,0,-261.638,-258.343,-27.0096,-180.273,-225.816 0|1:390:111,2,10,93,32,123:111:4373:2,10,93,32,123:80,392,3635,1235,4828:-363.637,-390.461,-749.615,-364.816,-717.982,-721.562,-98.214,-451.38,-425.735,-429.974,-295.645,-648.811,-623.166,-356.564,-645.768,0,-353.166,-327.521,-60.9194,-258.35,-322.73 1|1:490:51,23,21,149,9,151:51:2025:23,21,149,9,151:918,820,5908,355,5968:-795.427,-735.169,-894.96,-743.369,-834.474,-903.762,-324.442,-415.551,-423.751,-446.309,-781.57,-872.675,-880.875,-461.953,-945.575,-319.642,-410.751,-418.951,0,-457.153,-440.907 1|1:316:22,3,23,85,17,92:22:869:3,23,85,17,92:112,889,3333,672,3638:-495.412,-492.865,-563.475,-429.017,-491.361,-493.607,-227.92,-290.268,-226.417,-273.85,-446.73,-509.074,-445.227,-244.131,-513.126,-202.622,-264.97,-201.119,0,-218.833,-246.445 dDocent_Contig_6890 209 . N G 75.9266 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=80;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:80:-7.59157,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6891 39 . T G 6129.98 . AB=0.425819;ABP=27.817;AC=6;AF=0.5;AN=12;AO=221;CIGAR=1X;DP=519;DPB=519;DPRA=0;EPP=482.906;EPPR=650.109;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.973154;PAO=0;PQA=0;PQR=0;PRO=0;QA=8655;QR=11720;RO=298;RPL=0;RPP=482.906;RPPR=650.109;RPR=221;RUN=1;SAF=221;SAP=482.906;SAR=0;SRF=298;SRP=650.109;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:105:61,44:61:2417:44:1742:-125.395,0,-186.08 0/1:111:93,18:93:3666:18:693:-29.2682,0,-296.547 0/1:40:24,16:24:958:16:641:-45.9849,0,-74.4792 0/1:53:24,29:24:951:29:1113:-84.4926,0,-69.9339 0/1:108:70,38:70:2691:38:1501:-102.827,0,-209.816 0/1:102:26,76:26:1037:76:2965:-236.252,0,-62.9162 dDocent_Contig_6892 34 . C T 23589.4 . AB=0.138138;ABP=381.753;AC=0;AF=0;AN=12;AO=46;CIGAR=3M1X5M;DP=2041;DPB=2115;DPRA=0;EPP=102.898;EPPR=1890.02;GTI=0;LEN=1;MEANALT=14;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1566;QR=31569;RO=869;RPL=0;RPP=102.898;RPPR=1890.02;RPR=46;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=869;SRP=1890.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:242:51,13,13,0,143:51:1851:13,13,0,143:292,467,0,5428:-429.745,-422.743,-569.975,-407.004,-535.795,-554.238,-445.097,-573.888,-558.151,-596.244,0,-128.83,-113.08,-151.177,-108.13 0|0:333:80,7,10,46,158:80:2902:7,10,46,158:156,340,1566,5928:-461.435,-473.59,-708.431,-457.947,-682.967,-691.885,-358.5,-583.52,-567.877,-581.6,0,-225.034,-209.389,-109.941,-189.397 0|0:349:116,12,21,0,168:116:4233:12,21,0,168:298,784,0,6463:-495.678,-507.401,-849.609,-466.411,-789.034,-805.912,-530.598,-853.221,-812.233,-876.42,0,-322.648,-281.655,-345.844,-295.271 0|0:291:65,9,9,0,174:65:2331:9,9,0,174:206,344,0,6579:-519.663,-523.407,-710.806,-511.003,-685.289,-698.404,-539.23,-713.515,-701.113,-729.34,0,-174.306,-161.895,-190.124,-137.745 0|0:463:325,17,3,0,94:325:11763:17,3,0,94:389,108,0,3512:-189.743,-257.704,-1212.83,-278.766,-1209.14,-1238.12,-287.578,-1217.95,-1239.02,-1247.83,0,-930.434,-951.506,-960.318,-932.021 0|0:363:232,15,5,0,109:232:8489:15,5,0,109:375,178,0,4187:-273.903,-314.528,-1003.72,-329.238,-993.732,-1021.45,-343.742,-1008.24,-1022.96,-1037.46,0,-664.568,-679.286,-693.791,-660.978 dDocent_Contig_6893 126 . T A 67.7068 . AB=0.116883;ABP=101.178;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1M1D2M1X1M1X;DP=229;DPB=227.714;DPRA=1.01316;EPP=22.5536;EPPR=478.563;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.452055;PAO=0;PQA=0;PQR=0;PRO=0;QA=362;QR=8639;RO=219;RPL=9;RPP=22.5536;RPPR=478.563;RPR=0;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=478.563;SRR=219;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:43:42,0:42:1674:0:0:0,-12.6433,-150.484 0|0:31:31,0:31:1219:0:0:0,-9.33193,-109.991 0|1:34:29,5:29:1148:5:201:-8.23587,0,-93.3702 0|1:43:39,4:39:1503:4:161:-1.93061,0,-122.574 0|0:27:27,0:27:1082:0:0:0,-8.12781,-97.6698 0|0:51:51,0:51:2013:0:0:0,-15.3525,-181.373 dDocent_Contig_6894 20 . G A 1560.24 . AB=0.166362;ABP=531.885;AC=3;AF=0.25;AN=12;AO=117;CIGAR=1X;DP=1201;DPB=1201;DPRA=0;EPP=257.073;EPPR=2356.89;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4627;QR=42943;RO=1084;RPL=0;RPP=257.073;RPPR=2356.89;RPR=117;RUN=1;SAF=117;SAP=257.073;SAR=0;SRF=1084;SRP=2356.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:126:98,28:98:3804:28:1118:-62.9756,0,-304.457 0/1:222:196,26:196:7738:26:1029:-26.0726,0,-629.204 0/1:199:162,37:162:6425:37:1465:-72.198,0,-518.09 0/0:134:126,8:126:4999:8:304:0,-12.625,-422.084 0/0:290:289,1:289:11526:1:41:0,-83.2041,-1032.44 0/0:230:213,17:213:8451:17:670:0,-8.61061,-699.487 dDocent_Contig_6895 66 . A G 624.963 . AB=0.193069;ABP=168.3;AC=3;AF=0.25;AN=12;AO=43;CIGAR=1X;DP=330;DPB=330;DPRA=1.12;EPP=96.3836;EPPR=626.223;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993031;PAO=0;PQA=0;PQR=0;PRO=0;QA=1553;QR=10902;RO=287;RPL=43;RPP=96.3836;RPPR=626.223;RPR=0;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=287;SRP=626.223;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:29,3:29:1085:3:97:0,-0.586071,-88.9072 0/1:51:38,13:38:1405:13:455:-25.9155,0,-111.383 0/1:93:77,16:77:3013:16:577:-24.2558,0,-243.287 0/0:50:50,0:50:1847:0:0:0,-15.0515,-166.472 0/0:46:45,1:45:1708:1:39:0,-9.95081,-150.082 0/1:58:48,10:48:1844:10:385:-17.5467,0,-148.748 dDocent_Contig_6896 98 . N A 160.832 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=164;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:94:-8.77091,-0.90309,0 1/1:2:0,2:0:0:2:60:-5.69857,-0.60206,0 1/1:1:0,1:0:0:1:10:-0.999996,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6897 79 . G A 149.841 . AB=0.212766;ABP=36.6912;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=281;DPB=281;DPRA=0.701923;EPP=26.8965;EPPR=589.308;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.545455;PAIREDR=0.722222;PAO=0;PQA=0;PQR=0;PRO=0;QA=372;QR=9199;RO=270;RPL=11;RPP=26.8965;RPPR=589.308;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=270;SRP=589.308;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:25,1:25:841:1:35:0,-4.32815,-72.4992 0/0:51:51,0:51:1758:0:0:0,-15.3525,-158.507 0/0:49:49,0:49:1663:0:0:0,-14.7505,-149.954 0/1:47:37,10:37:1241:10:337:-16.507,0,-97.837 0/0:52:52,0:52:1766:0:0:0,-15.6536,-159.223 0/0:56:56,0:56:1930:0:0:0,-16.8577,-173.981 dDocent_Contig_6898 107 . N A 127.464 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=126;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:2:0,2:0:0:2:66:-6.26831,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:26:-2.59983,-0.30103,0 dDocent_Contig_6899 11 . G A 19348.2 . AB=0.353907;ABP=375.445;AC=6;AF=0.5;AN=12;AO=711;CIGAR=1X;DP=2009;DPB=2009;DPRA=0;EPP=1546.93;EPPR=2760.78;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.994374;PAIREDR=0.99685;PAO=0;PQA=0;PQR=0;PRO=0;QA=28267;QR=50712;RO=1270;RPL=0;RPP=1546.93;RPPR=2760.78;RPR=711;RUN=1;SAF=711;SAP=1546.93;SAR=0;SRF=1270;SRP=2760.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:277:183,89:183:7283:89:3501:-232.887,0,-572.853 0/1:367:199,157:199:7893:157:6254:-455.074,0,-602.411 0/1:145:79,66:79:3140:66:2663:-196.137,0,-239.031 0/1:349:208,129:208:8326:129:5155:-361.974,0,-647.033 0/1:405:272,133:272:10882:133:5274:-352.602,0,-856.723 0/1:466:329,137:329:13188:137:5420:-347.365,0,-1045.65 dDocent_Contig_6900 98 . N A 1260.1 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=42;CIGAR=1X;DP=42;DPB=42;DPRA=0;EPP=94.2121;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0.97619;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1378;QR=0;RO=0;RPL=42;RPP=94.2121;RPPR=0;RPR=0;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:17:0,17:0:0:17:568:-51.4375,-5.11751,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:16:0,16:0:0:16:518:-46.9302,-4.81648,0 1/1:8:0,8:0:0:8:257:-23.4442,-2.40824,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6901 12 . C T 244.691 . AB=0.147059;ABP=186.947;AC=4;AF=0.333333;AN=12;AO=32;CIGAR=1X;DP=324;DPB=324;DPRA=0;EPP=72.4974;EPPR=637.08;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.9375;PAIREDR=0.917808;PAO=0;PQA=0;PQR=0;PRO=0;QA=1167;QR=11682;RO=292;RPL=0;RPP=72.4974;RPPR=637.08;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=292;SRP=637.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:56:50,6:50:2002:6:205:-1.92153,0,-163.499 0/0:69:67,2:67:2700:2:75:0,-13.6507,-235.99 0/1:43:36,7:36:1446:7:257:-10.5381,0,-117.442 0/0:85:80,5:80:3174:5:193:0,-7.84606,-267.989 0/1:30:27,3:27:1075:3:114:-1.60132,0,-87.9984 0/1:41:32,9:32:1285:9:323:-17.0716,0,-103.572 dDocent_Contig_6903 42 . T C 596.82 . AB=0.125773;ABP=592.975;AC=3;AF=0.25;AN=12;AO=73;CIGAR=1X;DP=1111;DPB=1111;DPRA=1.18875;EPP=161.528;EPPR=2246.15;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.890411;PAIREDR=0.982642;PAO=0;PQA=0;PQR=0;PRO=0;QA=2817;QR=40403;RO=1037;RPL=0;RPP=161.528;RPPR=2246.15;RPR=73;RUN=1;SAF=73;SAP=161.528;SAR=0;SRF=1037;SRP=2254.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:165:146,19:146:5660:19:715:-14.9914,0,-459.638 0/1:218:194,23:194:7547:23:900:-15.5987,0,-613.244 0/1:102:83,19:83:3262:19:719:-34.3137,0,-262.964 0/0:227:219,8:219:8526:8:323:0,-38.8952,-737.514 0/0:239:235,4:235:9126:4:160:0,-57.1624,-806.12 0/0:160:160,0:160:6282:0:0:0,-48.1648,-565.194 dDocent_Contig_6904 14 . A C 1184.64 . AB=0.220833;ABP=165.473;AC=1;AF=0.0833333;AN=12;AO=56;CIGAR=1X;DP=982;DPB=982;DPRA=1.63031;EPP=124.613;EPPR=2013.79;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99892;PAO=0;PQA=0;PQR=0;PRO=0;QA=2252;QR=37072;RO=926;RPL=0;RPP=124.613;RPPR=2013.79;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=926;SRP=2013.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:116:116,0:116:4661:0:0:0,-34.9195,-419.401 0/0:140:140,0:140:5627:0:0:0,-42.1442,-506.226 0/0:92:92,0:92:3700:0:0:0,-27.6948,-333.005 0/0:201:198,3:198:7874:3:118:0,-49.5045,-697.233 0/0:193:193,0:193:7745:0:0:0,-58.0988,-696.626 0/1:240:187,53:187:7465:53:2134:-119.987,0,-599.221 dDocent_Contig_6905 28 . T A 2267.73 . AB=0.176046;ABP=634.714;AC=3;AF=0.25;AN=12;AO=145;CIGAR=1X;DP=1374;DPB=1374;DPRA=1.24365;EPP=317.874;EPPR=2671.75;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.986981;PAO=0;PQA=0;PQR=0;PRO=0;QA=5805;QR=48834;RO=1229;RPL=0;RPP=317.874;RPPR=2671.75;RPR=145;RUN=1;SAF=145;SAP=317.874;SAR=0;SRF=1229;SRP=2671.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:193:142,51:142:5624:51:2041:-125.78,0,-447.881 0/0:287:264,23:264:10554:23:917:0,-3.56569,-866.329 0/1:230:198,32:198:7895:32:1280:-46.2308,0,-640.875 0/1:270:231,39:231:9114:39:1567:-59.9838,0,-738.463 0/0:199:199,0:199:7911:0:0:0,-59.905,-711.573 0/0:195:195,0:195:7736:0:0:0,-58.7008,-695.844 dDocent_Contig_6906 81 . T C 12417.5 . AB=0.41018;ABP=96.6307;AC=3;AF=0.25;AN=12;AO=568;CIGAR=1X;DP=2334;DPB=2334;DPRA=1.43217;EPP=1236.41;EPPR=3800.92;GTI=0;LEN=1;MEANALT=2.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=18915;QR=45253;RO=1749;RPL=568;RPP=1236.41;RPPR=3800.92;RPR=0;RUN=1;SAF=568;SAP=1236.41;SAR=0;SRF=1749;SRP=3800.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:248:212,34:212:5330:34:1100:-25.1292,0,-405.752 0/0:399:376,19:376:9703:19:603:0,-64.4506,-818.901 0/0:286:285,0:285:7436:0:0:0,-85.7935,-669.354 0/0:313:305,1:305:7828:1:7:0,-91.4873,-703.979 0/1:563:332,229:332:8753:229:7613:-516.32,0,-618.995 0/1:525:239,285:239:6203:285:9592:-705.518,0,-400.656 dDocent_Contig_6907 1 . N G 111.009 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=48;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=121;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:121:-11.1003,-0.90309,0 dDocent_Contig_6908 17 . G A 9091.16 . AB=0.62987;ABP=70.6926;AC=6;AF=0.5;AN=12;AO=291;CIGAR=1X3M;DP=462;DPB=473.25;DPRA=0;EPP=634.909;EPPR=320.045;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.958763;PAIREDR=0.986301;PAO=0;PQA=0;PQR=0;PRO=0;QA=11688;QR=5714;RO=146;RPL=0;RPP=634.909;RPPR=320.045;RPR=291;RUN=1;SAF=291;SAP=634.909;SAR=0;SRF=146;SRP=320.045;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:73:22,0,0,51:22:872:0,0,51:0,0,2035:-161.359,-167.982,-239.757,-167.982,-239.757,-239.757,0,-72.1719,-72.1719,-56.8194 0|1:79:24,0,6,48:24:932:0,6,48:0,239,1929:-151.732,-158.957,-235.524,-139.277,-215.843,-214.037,0,-76.5632,-56.8807,-62.1138 0|1:70:22,0,2,46:22:862:0,2,46:0,79,1868:-147.452,-154.075,-224.947,-147.575,-218.447,-217.845,0,-70.8739,-64.3731,-57.0265 0|1:91:28,9,7,47:28:1090:9,7,47:362,276,1882:-146.611,-125.206,-212.07,-132.334,-192.073,-219.8,0,-59.7355,-66.8641,-75.4227 0|1:69:25,0,0,44:25:1000:0,0,44:0,0,1755:-137.392,-144.918,-227.293,-144.918,-227.293,-227.293,0,-82.7742,-82.7742,-69.5289 0|1:80:25,0,0,55:25:958:0,0,55:0,0,2219:-175.791,-183.317,-261.918,-183.317,-261.918,-261.918,0,-78.9907,-78.9907,-62.4341 dDocent_Contig_6909 20 . G A 147.17 . AB=0.225806;ABP=23.254;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=134;DPB=134;DPRA=1.50485;EPP=18.2106;EPPR=278.787;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.714286;PAIREDR=0.874016;PAO=0;PQA=0;PQR=0;PRO=0;QA=280;QR=5075;RO=127;RPL=0;RPP=18.2106;RPPR=278.787;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=127;SRP=278.787;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:859:0:0:0,-6.62266,-77.6171 0/1:31:24,7:24:977:7:280:-16.2398,0,-78.893 0/0:28:28,0:28:1106:0:0:0,-8.42884,-99.8185 0/0:26:26,0:26:1045:0:0:0,-7.82678,-94.3405 0/0:13:13,0:13:522:0:0:0,-3.91339,-47.3267 0/0:14:14,0:14:566:0:0:0,-4.21442,-51.2826 dDocent_Contig_6910 98 . N T 167.955 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=166;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:59:-5.5063,-0.90309,0 1/1:2:0,2:0:0:2:20:-1.89999,-0.60206,0 1/1:2:0,2:0:0:2:18:-1.70999,-0.60206,0 dDocent_Contig_6911 8 . A T 250.2 . AB=0.37037;ABP=6.95112;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=227;DPB=227;DPRA=0.873418;EPP=29.068;EPPR=469.877;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.75;PAIREDR=0.604651;PAO=0;PQA=0;PQR=0;PRO=0;QA=455;QR=8265;RO=215;RPL=0;RPP=29.068;RPPR=469.877;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=215;SRP=469.877;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:27:17,10:17:657:10:378:-26.2419,0,-51.3393 0/0:60:60,0:60:2311:0:0:0,-18.0618,-208.205 0/0:17:17,0:17:648:0:0:0,-5.11751,-58.6549 0/0:42:40,2:40:1538:2:77:0,-5.33412,-131.382 0/0:40:40,0:40:1541:0:0:0,-12.0412,-138.961 0/0:41:41,0:41:1570:0:0:0,-12.3422,-141.569 dDocent_Contig_6912 12 . T C 3759.6 . AB=0.516129;ABP=3.57068;AC=6;AF=0.5;AN=12;AO=128;CIGAR=1X;DP=248;DPB=248;DPRA=0;EPP=280.959;EPPR=263.587;GTI=0;LEN=1;MEANALT=1;MQM=59.875;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.828125;PAIREDR=0.675;PAO=0;PQA=0;PQR=0;PRO=0;QA=5112;QR=4817;RO=120;RPL=0;RPP=280.959;RPPR=263.587;RPR=128;RUN=1;SAF=128;SAP=280.959;SAR=0;SRF=120;SRP=263.587;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:47:21,26:21:855:26:1036:-79.2811,0,-63.1115 0/1:54:30,24:30:1200:24:958:-70.2648,0,-92.0166 0/1:32:18,14:18:723:14:572:-42.1884,0,-55.7628 0/1:41:13,28:13:513:28:1123:-89.0096,0,-34.1725 0/1:24:16,8:16:642:8:324:-22.3045,0,-50.8898 0/1:50:22,28:22:884:28:1099:-84.1332,0,-64.8133 dDocent_Contig_6913 24 . C T 3739.65 . AB=0.267826;ABP=272.231;AC=5;AF=0.416667;AN=12;AO=156;CIGAR=1X;DP=696;DPB=696;DPRA=0;EPP=341.76;EPPR=1175.61;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.99359;PAIREDR=0.990741;PAO=0;PQA=0;PQR=0;PRO=0;QA=6248;QR=21583;RO=540;RPL=0;RPP=341.76;RPPR=1175.61;RPR=156;RUN=1;SAF=156;SAP=341.76;SAR=0;SRF=540;SRP=1175.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:63:50,13:50:2002:13:523:-28.4518,0,-161.398 0/1:105:80,25:80:3232:25:1010:-59.5856,0,-259.316 0/1:163:107,56:107:4274:56:2253:-153.855,0,-335.526 0/1:122:76,46:76:3031:46:1828:-128.004,0,-236.14 0/1:122:108,14:108:4314:14:552:-13.2908,0,-351.476 0/0:121:119,2:119:4730:2:82:0,-28.645,-417.814 dDocent_Contig_6914 35 . C G 367.821 . AB=0.253968;ABP=36.1339;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X;DP=266;DPB=266;DPRA=0.608333;EPP=50.7827;EPPR=532.85;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=886;QR=9827;RO=244;RPL=0;RPP=50.7827;RPPR=532.85;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=244;SRP=532.85;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:21,1:21:844:1:41:0,-2.52809,-72.1786 0/1:39:33,6:33:1328:6:244:-10.5987,0,-108.041 0/1:24:14,10:14:567:10:403:-29.4048,0,-44.1467 0/0:61:56,5:56:2257:5:198:0,-0.165451,-185.096 0/0:56:56,0:56:2257:0:0:0,-16.8577,-203.29 0/0:64:64,0:64:2574:0:0:0,-19.2659,-231.778 dDocent_Contig_6915 15 . G C 1560.24 . AB=0.171484;ABP=489.525;AC=3;AF=0.25;AN=12;AO=110;CIGAR=1X;DP=1103;DPB=1103;DPRA=0.855502;EPP=241.872;EPPR=2157.11;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0545455;PAIREDR=0.985887;PAO=0;PQA=0;PQR=0;PRO=0;QA=4335;QR=36521;RO=992;RPL=0;RPP=241.872;RPPR=2157.11;RPR=110;RUN=1;SAF=110;SAP=241.872;SAR=0;SRF=992;SRP=2157.11;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:196:180,16:180:6628:16:620:0,-2.86728,-540.374 0/0:209:209,0:209:7647:0:0:0,-62.9153,-688.155 0/1:151:113,38:113:4091:38:1502:-89.9824,0,-322.863 0/1:161:142,19:142:5240:19:747:-19.0892,0,-423.188 0/1:207:175,32:175:6477:32:1269:-52.1738,0,-520.603 0/0:179:173,5:173:6438:5:197:0,-35.8588,-561.286 dDocent_Contig_6916 84 . T C 120.278 . AB=0.125828;ABP=186.636;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X;DP=625;DPB=625;DPRA=0.74581;EPP=50.7827;EPPR=1310.24;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998339;PAO=0;PQA=0;PQR=0;PRO=0;QA=778;QR=21676;RO=602;RPL=22;RPP=50.7827;RPPR=1310.24;RPR=0;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=602;SRP=1310.24;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:69:69,0:69:2414:0:0:0,-20.7711,-217.516 0/1:77:67,10:67:2347:10:340:-7.74887,0,-188.309 0/0:116:112,3:112:4072:3:111:0,-24.6343,-356.284 0/1:74:65,9:65:2375:9:327:-7.50079,0,-191.719 0/0:176:176,0:176:6350:0:0:0,-52.9813,-571.549 0/0:113:113,0:113:4118:0:0:0,-34.0164,-370.782 dDocent_Contig_6917 10 . T C 6025.06 . AB=0.178673;ABP=1584.12;AC=2;AF=0.166667;AN=12;AO=323;CIGAR=1X;DP=4402;DPB=4402;DPRA=1.31152;EPP=704.396;EPPR=8853.93;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.984053;PAO=0;PQA=0;PQR=0;PRO=0;QA=12934;QR=161508;RO=4076;RPL=0;RPP=704.396;RPPR=8853.93;RPR=323;RUN=1;SAF=323;SAP=704.396;SAR=0;SRF=4076;SRP=8853.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:683:682,1:682:26949:1:33:0,-202.304,-2419.83 0/0:741:733,7:733:29124:7:272:0,-198.317,-2593.78 0/0:594:594,0:594:23630:0:0:0,-178.812,-2124.71 0/0:621:621,0:621:24580:0:0:0,-186.94,-2210.14 0/1:899:672,225:672:26624:225:9010:-540.092,0,-2123.64 0/1:864:774,90:774:30601:90:3619:-65.6358,0,-2491.33 dDocent_Contig_6918 47 . A G 3553.38 . AB=0.118644;ABP=77.5396;AC=0;AF=0;AN=12;AO=7;CIGAR=2X;DP=318;DPB=318;DPRA=0;EPP=18.2106;EPPR=400.39;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=281;QR=7246;RO=183;RPL=0;RPP=18.2106;RPPR=400.39;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=183;SRP=400.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:40:32,0,8:32:1258:0,8:0,318:-16.9438,-26.5768,-130.041,0,-103.86,-101.452 0|0:52:36,0,16:36:1403:0,16:0,632:-41.5593,-52.3964,-167.696,0,-115.693,-110.876 0|0:48:26,0,22:26:1037:0,22:0,891:-66.0477,-73.8745,-159.272,0,-85.7996,-79.1769 0|0:54:33,0,21:33:1322:0,21:0,826:-58.3879,-68.3219,-177.238,0,-109.311,-102.99 0|0:59:22,7,30:22:887:7,30:281,1196:-91.8527,-75.3213,-146.329,0,-49.9612,-64.0834 0|0:65:34,0,31:34:1339:0,31:0,1234:-91.7688,-102.004,-212.147,0,-110.539,-101.207 dDocent_Contig_6919 17 . T C 166.116 . AB=0.0906475;ABP=1014.58;AC=2;AF=0.166667;AN=12;AO=87;CIGAR=1X;DP=1771;DPB=1771;DPRA=1.01887;EPP=191.928;EPPR=3657.6;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3497;QR=67484;RO=1683;RPL=0;RPP=191.928;RPPR=3657.6;RPR=87;RUN=1;SAF=87;SAP=191.928;SAR=0;SRF=1683;SRP=3657.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:252:238,14:238:9562:14:560:0,-25.1191,-809.224 0/1:285:258,26:258:10408:26:1054:-9.27598,0,-850.115 0/1:410:373,37:373:14893:37:1486:-10.5574,0,-1215.77 0/0:241:231,10:231:9236:10:397:0,-36.4617,-794.573 0/0:315:315,0:315:12661:0:0:0,-94.8244,-1138.53 0/0:268:268,0:268:10724:0:0:0,-80.676,-964.423 dDocent_Contig_6920 60 . T G 13149.4 . AB=0.459459;ABP=17.2716;AC=4;AF=0.333333;AN=12;AO=468;CIGAR=1X;DP=1659;DPB=1659;DPRA=0.997834;EPP=1019.26;EPPR=2515.87;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.997863;PAIREDR=0.993272;PAO=0;PQA=0;PQR=0;PRO=0;QA=18398;QR=46661;RO=1189;RPL=468;RPP=1019.26;RPPR=2584.89;RPR=0;RUN=1;SAF=468;SAP=1019.26;SAR=0;SRF=1181;SRP=2515.87;SRR=8;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:260:133,126:133:5269:126:4960:-367.943,0,-395.714 0/1:244:131,113:131:5160:113:4449:-326.933,0,-390.836 0/1:255:128,127:128:4952:127:5003:-373.423,0,-368.838 0/1:240:147,93:147:5749:93:3623:-253.861,0,-444.989 0/0:277:276,0:276:10871:0:0:0,-83.0843,-977.643 0/0:383:374,9:374:14660:9:363:0,-82.2602,-1285.32 dDocent_Contig_6921 13 . G A 174.581 . AB=0.129032;ABP=151.231;AC=1;AF=0.0833333;AN=12;AO=26;CIGAR=1X;DP=640;DPB=640;DPRA=0.672161;EPP=59.4686;EPPR=1336.29;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.985342;PAO=0;PQA=0;PQR=0;PRO=0;QA=1022;QR=24486;RO=614;RPL=0;RPP=59.4686;RPPR=1336.29;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=614;SRP=1336.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:81:79,2:79:3155:2:82:0,-16.6038,-276.237 0/1:124:108,16:108:4260:16:622:-18.981,0,-346.042 0/0:59:57,2:57:2293:2:76:0,-10.546,-199.311 0/0:103:97,6:97:3911:6:242:0,-8.84914,-329.808 0/0:151:151,0:151:5990:0:0:0,-45.4555,-538.864 0/0:122:122,0:122:4877:0:0:0,-36.7257,-438.82 dDocent_Contig_6922 109 . G A 171.411 . AB=0.22;ABP=37.059;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=228;DPB=228;DPRA=1.40449;EPP=26.8965;EPPR=472.048;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.722222;PAO=0;PQA=0;PQR=0;PRO=0;QA=371;QR=7184;RO=216;RPL=0;RPP=26.8965;RPPR=472.048;RPR=11;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=472.048;SRR=216;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:909:0:0:0,-8.12781,-82.12 0/0:32:32,0:32:1043:0:0:0,-9.63296,-94.1653 0/0:40:39,0:39:1305:0:0:0,-11.7402,-117.667 0/0:48:48,0:48:1586:0:0:0,-14.4494,-143.021 0/1:50:39,11:39:1274:11:371:-18.6639,0,-99.8994 0/0:31:31,0:31:1067:0:0:0,-9.33193,-96.3391 dDocent_Contig_6923 11 . C T 3552.94 . AB=0.173991;ABP=1032.33;AC=2;AF=0.166667;AN=12;AO=207;CIGAR=1X;DP=3108;DPB=3108;DPRA=1.29032;EPP=452.505;EPPR=6300.28;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8232;QR=116317;RO=2900;RPL=0;RPP=452.505;RPPR=6300.28;RPR=207;RUN=1;SAF=207;SAP=452.505;SAR=0;SRF=2900;SRP=6300.28;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:347:346,0:346:13871:0:0:0,-104.156,-1247.2 0/0:616:615,1:615:24679:1:41:0,-181.34,-2214.8 0/0:509:497,12:497:19943:12:478:0,-109.856,-1749.77 0/0:521:521,0:521:20853:0:0:0,-156.837,-1874.93 0/1:581:444,137:444:17843:137:5477:-317.85,0,-1429.45 0/1:534:477,57:477:19128:57:2236:-40.6657,0,-1559.12 dDocent_Contig_6925 25 . C A 421.031 . AB=0.173611;ABP=136.254;AC=4;AF=0.333333;AN=12;AO=29;CIGAR=1X;DP=225;DPB=225;DPRA=0;EPP=65.983;EPPR=428.619;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.896552;PAIREDR=0.908163;PAO=0;PQA=0;PQR=0;PRO=0;QA=1175;QR=7849;RO=196;RPL=0;RPP=65.983;RPPR=428.619;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=196;SRP=428.619;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:28,6:28:1104:6:243:-12.0126,0,-89.4042 0/0:50:47,3:47:1870:3:121:0,-3.77151,-157.212 0/1:41:31,10:31:1252:10:408:-24.7384,0,-100.605 0/1:37:32,5:32:1289:5:203:-7.51495,0,-105.136 0/0:31:30,1:30:1196:1:41:0,-5.23736,-103.818 0/1:32:28,4:28:1138:4:159:-5.05899,0,-93.0651 dDocent_Contig_6927 98 . N A 57.9462 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=61;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:61:-5.79353,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6928 58 . T A 137.582 . AB=0.0884354;ABP=1084.39;AC=1;AF=0.0833333;AN=12;AO=217;CIGAR=1X;DP=4677;DPB=4677;DPRA=0;EPP=474.22;EPPR=9679.09;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999776;PAO=0;PQA=0;PQR=0;PRO=0;QA=8653;QR=177748;RO=4456;RPL=217;RPP=474.22;RPPR=9679.09;RPR=0;RUN=1;SAF=217;SAP=474.22;SAR=0;SRF=4456;SRP=9679.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:705:647,58:647:25714:58:2296:0,-5.43221,-2105.2 0/0:788:730,57:730:29103:57:2281:0,-31.8104,-2411.17 0/0:628:593,35:593:23690:35:1399:0,-62.8807,-2003.83 0/1:735:669,65:669:26739:65:2628:-15.2811,0,-2182.75 0/0:971:969,1:969:38665:1:8:0,-291.444,-3475.25 0/0:850:848,1:848:33837:1:41:0,-251.73,-3038.25 dDocent_Contig_6929 92 . A G 220.051 . AB=0.120104;ABP=483.121;AC=2;AF=0.166667;AN=12;AO=78;CIGAR=1X;DP=1304;DPB=1304;DPRA=0;EPP=172.385;EPPR=2663.06;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.97551;PAO=0;PQA=0;PQR=0;PRO=0;QA=2641;QR=42054;RO=1225;RPL=78;RPP=172.385;RPPR=2663.06;RPR=0;RUN=1;SAF=78;SAP=172.385;SAR=0;SRF=1225;SRP=2663.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:199:192,7:192:6617:7:244:0,-37.6049,-573.357 0/0:181:171,10:171:5846:10:327:0,-24.7385,-496.543 0/1:133:117,16:117:4058:16:520:-7.07179,0,-325.391 0/1:250:219,30:219:7511:30:1035:-18.1551,0,-600.781 0/0:298:284,14:284:9736:14:481:0,-46.0891,-832.646 0/0:243:242,1:242:8286:1:34:0,-69.7514,-742.41 dDocent_Contig_6930 59 . T C 257.049 . AB=0.156863;ABP=107.326;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=587;DPB=587;DPRA=1.43275;EPP=39.9253;EPPR=1240.75;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=681;QR=22757;RO=570;RPL=17;RPP=39.9253;RPPR=1240.75;RPR=0;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=570;SRP=1240.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:63:63,0:63:2480:0:0:0,-18.9649,-223.345 0/0:114:114,0:114:4571:0:0:0,-34.3174,-411.307 0/0:110:110,0:110:4409:0:0:0,-33.1133,-396.746 0/0:55:55,0:55:2185:0:0:0,-16.5566,-196.824 0/0:143:142,1:142:5649:1:41:0,-38.9527,-504.134 0/1:102:86,16:86:3463:16:640:-27.2278,0,-280.998 dDocent_Contig_6931 10 . T C 89.8615 . AB=0.0969163;ABP=323.365;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X;DP=660;DPB=660;DPRA=1.0485;EPP=50.7827;EPPR=1386.24;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.984301;PAO=0;PQA=0;PQR=0;PRO=0;QA=888;QR=25326;RO=637;RPL=0;RPP=50.7827;RPPR=1386.24;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=637;SRP=1386.24;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:59,0:59:2346:0:0:0,-17.7608,-211.302 0/1:129:116,12:116:4592:12:480:-4.62818,0,-374.288 0/1:98:88,10:88:3504:10:408:-7.57965,0,-285.902 0/0:111:111,0:111:4409:0:0:0,-33.4143,-396.747 0/0:158:158,0:158:6268:0:0:0,-47.5627,-563.888 0/0:105:105,0:105:4207:0:0:0,-31.6081,-378.587 dDocent_Contig_6932 46 . C G 1023.04 . AB=0.133663;ABP=709.405;AC=2;AF=0.166667;AN=12;AO=115;CIGAR=1M1X1M;DP=2368;DPB=2488;DPRA=0.770492;EPP=252.73;EPPR=4784.59;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.998638;PAO=0;PQA=0;PQR=0;PRO=0;QA=4513;QR=86979;RO=2202;RPL=0;RPP=252.73;RPPR=4784.59;RPR=115;RUN=1;SAF=115;SAP=252.73;SAR=0;SRF=2202;SRP=4784.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:328:313,0,14:313:12349:0,14:0,554:0,-94.2224,-1110.23,-48.6338,-1064.63,-1060.42 0|1:377:329,0,48:329:12963:0,48:0,1888:-56.6482,-155.687,-1222.09,0,-1066.8,-1052.35 0|1:229:194,0,33:194:7666:0,33:0,1304:-48.878,-107.278,-738.076,0,-630.784,-620.85 0|0:287:269,0,18:269:10676:0,18:0,699:0,-80.9771,-959.801,-23.1594,-902.371,-896.953 0|0:659:651,5,2:651:25732:5,2:171,68:0,-182.112,-2298.11,-190.461,-2294.1,-2307.37 0|0:488:446,40,0:446:17593:40,0:1441,0:0,-16.671,-1452.14,-134.259,-1464.18,-1581.73 dDocent_Contig_6933 68 . G T 775.817 . AB=0.417722;ABP=7.6556;AC=3;AF=0.25;AN=12;AO=34;CIGAR=1X3M1X;DP=149;DPB=149;DPRA=0.784483;EPP=76.8404;EPPR=252.73;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1208;QR=4019;RO=115;RPL=34;RPP=76.8404;RPPR=252.73;RPR=0;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=115;SRP=252.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:12:11,1:11:381:1:35:0,-0.113731,-31.124 0|1:14:7,7:7:246:7:248:-18.4501,0,-18.2671 0|1:13:6,7:6:216:7:247:-18.6592,0,-15.8769 0|1:52:33,19:33:1154:19:678:-45.6937,0,-88.5085 0|0:33:33,0:33:1140:0:0:0,-9.93399,-102.905 0|0:25:25,0:25:882:0:0:0,-7.52575,-79.6964 dDocent_Contig_6934 20 . C T 287.417 . AB=0.140127;ABP=179.619;AC=3;AF=0.25;AN=12;AO=27;CIGAR=1X;DP=321;DPB=321;DPRA=0;EPP=61.6401;EPPR=641.423;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993197;PAO=0;PQA=0;PQR=0;PRO=0;QA=1095;QR=11756;RO=294;RPL=0;RPP=61.6401;RPPR=641.423;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=294;SRP=641.423;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:40:36,4:36:1444:4:164:-3.1087,0,-118.163 0/1:46:40,6:40:1590:6:243:-8.4008,0,-129.486 0/1:71:59,12:59:2358:12:483:-22.4485,0,-190.989 0/0:52:49,3:49:1986:3:123:0,-4.18877,-167.462 0/0:51:50,1:50:1964:1:41:0,-11.258,-172.853 0/0:61:60,1:60:2414:1:41:0,-14.2683,-213.305 dDocent_Contig_6935 98 . N T 143.152 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=141;QR=0;RO=0;RPL=7;RPP=18.2106;RPPR=0;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:20:-1.99996,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:60:-5.6988,-0.60206,0 1/1:2:0,2:0:0:2:40:-3.79967,-0.60206,0 1/1:1:0,1:0:0:1:11:-1.09999,-0.30103,0 1/1:1:0,1:0:0:1:10:-0.999996,-0.30103,0 dDocent_Contig_6936 20 . A G 5375.13 . AB=0.167499;ABP=1734.41;AC=5;AF=0.416667;AN=12;AO=326;CIGAR=1X;DP=2100;DPB=2100;DPRA=0;EPP=710.91;EPPR=3855.2;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13036;QR=71124;RO=1774;RPL=0;RPP=710.91;RPPR=3855.2;RPR=326;RUN=1;SAF=326;SAP=710.91;SAR=0;SRF=1774;SRP=3855.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:325:259,66:259:10300:66:2662:-141.855,0,-828.473 0/1:354:305,49:305:12270:49:1927:-67.0565,0,-996.826 0/0:297:273,24:273:10954:24:947:0,-3.87924,-899.556 0/1:332:304,28:304:12169:28:1121:-1.23163,0,-994.37 0/1:435:336,99:336:13502:99:3966:-225.971,0,-1083.19 0/1:357:297,60:297:11929:60:2413:-109.841,0,-965.273 dDocent_Contig_6937 98 . N G 190.708 . AB=0;ABP=0;AC=10;AF=0.833333;AN=12;AO=10;CIGAR=1X;DP=11;DPB=11;DPRA=2;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=189;QR=0;RO=0;RPL=10;RPP=24.725;RPPR=0;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:2:0,2:0:0:2:26:-2.46997,-0.60206,0 0/0:1:0,0:0:0:0:0:0,0,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:4:0,4:0:0:4:52:-4.80993,-1.20412,0 1/1:2:0,2:0:0:2:42:-3.9887,-0.60206,0 dDocent_Contig_6938 11 . A T 37.4883 . AB=0.0928571;ABP=204.585;AC=1;AF=0.0833333;AN=12;AO=33;CIGAR=1X;DP=783;DPB=783;DPRA=1.54;EPP=74.6689;EPPR=1631.61;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.976;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1316;QR=29831;RO=750;RPL=0;RPP=74.6689;RPPR=1631.61;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=750;SRP=1631.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:140:135,5:135:5327:5:199:0,-23.8558,-460.995 0/0:132:124,8:124:4918:8:309:0,-11.5671,-414.349 0/1:140:127,13:127:5072:13:523:-5.27163,0,-414.21 0/0:152:147,5:147:5853:5:204:0,-27.0125,-507.827 0/0:129:127,2:127:5068:2:81:0,-31.1471,-448.228 0/0:90:90,0:90:3593:0:0:0,-27.0927,-323.398 dDocent_Contig_6939 20 . A G 308.687 . AB=0.113712;ABP=390.542;AC=1;AF=0.0833333;AN=12;AO=60;CIGAR=1X;DP=1610;DPB=1610;DPRA=0.736047;EPP=133.299;EPPR=3366.62;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998063;PAO=0;PQA=0;PQR=0;PRO=0;QA=2361;QR=61472;RO=1549;RPL=0;RPP=133.299;RPPR=3366.62;RPR=60;RUN=1;SAF=60;SAP=133.299;SAR=0;SRF=1549;SRP=3366.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:249:239,10:239:9470:10:377:0,-40.689,-817.467 0/1:299:264,34:264:10475:34:1355:-32.3915,0,-852.289 0/0:179:172,7:172:6752:7:282:0,-28.1314,-581.652 0/0:239:238,1:238:9469:1:41:0,-67.8516,-847.549 0/0:344:344,0:344:13677:0:0:0,-103.554,-1229.93 0/0:300:292,8:292:11629:8:306:0,-62.414,-1017.93 dDocent_Contig_6940 68 . A T 559.433 . AB=0.243243;ABP=66.5699;AC=3;AF=0.25;AN=12;AO=27;CIGAR=1X;DP=557;DPB=557;DPRA=0.248879;EPP=61.6401;EPPR=1153.89;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1039;QR=20314;RO=530;RPL=27;RPP=61.6401;RPPR=1153.89;RPR=0;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=530;SRP=1153.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:62:50,12:50:1894:12:450:-22.18,0,-152.04 0/0:64:64,0:64:2423:0:0:0,-19.2659,-218.283 0/1:19:13,6:13:518:6:242:-16.4374,0,-41.2437 0/1:30:21,9:21:805:9:347:-22.5478,0,-63.7358 0/0:221:221,0:221:8359:0:0:0,-66.5276,-752.095 0/0:161:161,0:161:6315:0:0:0,-48.4658,-568.155 dDocent_Contig_6941 10 . T G 2061.78 . AB=0.245902;ABP=208.268;AC=3;AF=0.25;AN=12;AO=94;CIGAR=1X;DP=723;DPB=723;DPRA=0;EPP=207.129;EPPR=1368.87;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.989362;PAIREDR=0.993641;PAO=0;PQA=0;PQR=0;PRO=0;QA=3726;QR=25211;RO=629;RPL=0;RPP=207.129;RPPR=1368.87;RPR=94;RUN=1;SAF=94;SAP=207.129;SAR=0;SRF=629;SRP=1368.87;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:95:93,2:93:3730:2:82:0,-20.8182,-327.928 0/0:164:163,1:163:6518:1:41:0,-45.2744,-582.248 0/0:98:97,1:97:3903:1:39:0,-25.6044,-347.36 0/1:104:92,12:92:3667:12:462:-10.6104,0,-298.738 0/1:162:101,61:101:4076:61:2433:-170.354,0,-318.038 0/1:100:83,17:83:3317:17:669:-30.435,0,-268.483 dDocent_Contig_6942 80 . A G 190.949 . AB=0.123596;ABP=331.586;AC=1;AF=0.0833333;AN=12;AO=46;CIGAR=10M1X;DP=1285;DPB=1298.73;DPRA=0.698601;EPP=102.898;EPPR=2547.98;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.998294;PAO=0;PQA=0;PQR=0;PRO=0;QA=1565;QR=40948;RO=1172;RPL=46;RPP=102.898;RPPR=2547.98;RPR=0;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=1172;SRP=2547.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:267:232,0,33:232:8014:0,33:0,1111:-20.3167,-90.1557,-741.319,0,-651.297,-641.363 0|0:229:208,13,1:208:7155:13,1:387,35:0,-31.6843,-608.943,-59.7633,-610.008,-640.615 0|0:116:98,11,6:98:3467:11,6:294,210:0,-6.40827,-285.485,-12.3898,-271.71,-293.04 0|0:177:159,13,5:159:5613:13,5:368,175:0,-18.7095,-471.881,-33.6065,-461.556,-489.248 0|0:286:280,0,0:280:9790:0,0:0,0:0,-84.2884,-880.777,-84.2884,-880.777,-880.777 0|0:210:195,11,1:195:6909:11,1:319,34:0,-33.3025,-592.891,-55.9392,-593.444,-618.535 dDocent_Contig_6943 36 . T C 5778.11 . AB=0.199729;ABP=1159.71;AC=2;AF=0.166667;AN=12;AO=303;CIGAR=1X;DP=3517;DPB=3517;DPRA=1.47676;EPP=660.966;EPPR=6977.78;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999066;PAO=0;PQA=0;PQR=0;PRO=0;QA=11688;QR=117599;RO=3212;RPL=0;RPP=660.966;RPPR=6977.78;RPR=303;RUN=1;SAF=303;SAP=660.966;SAR=0;SRF=3212;SRP=6977.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:525:525,0:525:19112:0:0:0,-158.041,-1719.3 0/0:620:611,8:611:22527:8:291:0,-160.009,-1999.87 0/0:360:360,0:360:13418:0:0:0,-108.371,-1207.07 0/0:535:535,0:535:19548:0:0:0,-161.051,-1758.46 0/1:816:674,141:674:24487:141:5372:-237.952,0,-1957.3 0/1:661:507,154:507:18507:154:6025:-343.081,0,-1465.88 dDocent_Contig_6944 25 . T C 2451.19 . AB=0;ABP=0;AC=4;AF=0.333333;AN=12;AO=3;CIGAR=1M2D2M1X2M1X2M1X4M;DP=343;DPB=343.125;DPRA=0;EPP=9.52472;EPPR=404.733;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.891892;PAO=0;PQA=0;PQR=0;PRO=0;QA=120;QR=7302;RO=185;RPL=0;RPP=9.52472;RPPR=404.733;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=185;SRP=404.733;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:59:26,6,16,0,0,10:26:1025:6,16,0,0,10:236,610,0,0,401:-42.1988,-30.6112,-113.14,0,-64.9173,-79.514,-50.0256,-114.946,-84.3304,-134.359,-50.0256,-114.946,-84.3304,-134.359,-134.359,-16.9836,-81.9067,-51.2919,-101.321,-101.321,-98.3104 0|1:75:42,1,28,0,0,3:42:1656:1,28,0,0,3:41,1104,0,0,122:-78.1787,-87.4374,-223.382,0,-132.855,-127.811,-90.822,-223.683,-136.24,-227.068,-90.822,-223.683,-136.24,-227.068,-227.068,-80.7576,-213.62,-126.176,-217.004,-217.004,-216.101 0|1:57:22,15,16,0,0,3:22:870:15,16,0,0,3:597,630,0,0,123:-45.2003,-2.66487,-69.7459,0,-22.4368,-66.7781,-51.823,-74.2614,-71.5946,-123.42,-51.823,-74.2614,-71.5946,-123.42,-123.42,-41.6696,-64.1081,-61.4414,-113.267,-113.267,-112.363 0|1:49:19,7,19,0,0,3:19:737:7,19,0,0,3:256,748,0,0,122:-55.8221,-40.6327,-99.0691,0,-39.6431,-54.8336,-61.5416,-101.176,-60.5532,-122.088,-61.5416,-101.176,-60.5532,-122.088,-122.088,-51.4763,-91.1119,-50.4874,-112.024,-112.024,-111.121 0|0:51:44,0,3,3,0,1:44:1744:0,3,3,0,1:0,121,120,0,41:0,-13.2453,-156.794,-3.27072,-146.819,-145.916,-3.36219,-146.908,-136.934,-146.005,-13.2453,-156.794,-146.819,-146.908,-156.794,-9.86006,-153.409,-143.435,-143.524,-153.409,-153.108 0|0:52:32,0,7,0,13,0:32:1270:0,7,0,13,0:0,263,0,517,0:-32.941,-42.5739,-147.127,-21.04,-125.588,-123.481,-42.5739,-147.127,-125.588,-147.127,0,-104.566,-83.0284,-104.566,-100.653,-42.5739,-147.127,-125.588,-147.127,-104.566,-147.127 dDocent_Contig_6945 49 . A T 78.1149 . AB=0.185185;ABP=26.2531;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=117;DPB=117;DPRA=1.5;EPP=13.8677;EPPR=229.154;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.785714;PAO=0;PQA=0;PQR=0;PRO=0;QA=190;QR=4441;RO=112;RPL=0;RPP=13.8677;RPPR=229.154;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=112;SRP=246.215;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:833:0:0:0,-6.32163,-75.2852 0/0:19:19,0:19:729:0:0:0,-5.71957,-65.9256 0/0:15:15,0:15:593:0:0:0,-4.51545,-53.709 0/0:13:13,0:13:519:0:0:0,-3.91339,-47.0572 0/0:22:22,0:22:884:0:0:0,-6.62266,-79.866 0/1:27:22,5:22:883:5:190:-9.33437,0,-71.6517 dDocent_Contig_6946 18 . A C 11076.5 . AB=0.457933;ABP=15.799;AC=5;AF=0.416667;AN=12;AO=384;CIGAR=1X;DP=1033;DPB=1033;DPRA=0;EPP=836.856;EPPR=1405.78;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.5417;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.958333;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=15384;QR=25559;RO=646;RPL=0;RPP=836.856;RPPR=1405.78;RPR=384;RUN=1;SAF=384;SAP=836.856;SAR=0;SRF=646;SRP=1405.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:165:48,117:48:1899:117:4686:-371.98,0,-121.452 0/1:174:94,80:94:3694:80:3188:-234.601,0,-280.122 0/1:113:69,41:69:2741:41:1646:-114.847,0,-213.285 0/1:144:46,98:46:1860:98:3945:-306.445,0,-124.255 0/0:201:198,3:198:7776:3:119:0,-49.412,-688.374 0/1:236:191,45:191:7589:45:1800:-89.0023,0,-611.597 dDocent_Contig_6947 24 . T C 146.627 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=83;CIGAR=1X1M1X;DP=2989;DPB=2988.67;DPRA=0.824421;EPP=183.243;EPPR=6117.88;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.981889;PAO=0;PQA=0;PQR=0;PRO=0;QA=3294;QR=110973;RO=2816;RPL=0;RPP=183.243;RPPR=6117.88;RPR=83;RUN=1;SAF=83;SAP=183.243;SAR=0;SRF=2816;SRP=6117.88;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:492:482,9,0:482:18919:9,0:351,0:0,-115.987,-1669.43,-145.096,-1672.14,-1700.99 0|0:514:483,26,3:483:19152:26,3:1029,122:0,-60.7086,-1629.31,-135.333,-1627.07,-1710.86 0|0:303:288,14,0:288:11334:14,0:561,0:0,-40.4861,-968.545,-86.6966,-972.76,-1018.98 0|0:541:506,34,0:506:20028:34,0:1353,0:0,-40.9311,-1678.96,-152.321,-1689.2,-1800.6 0|0:561:558,0,1:558:21884:0,1:0,41:0,-167.975,-1967.59,-164.554,-1964.21,-1963.91 0|0:578:499,0,52:499:19656:0,52:0,2025:-16.1856,-166.4,-1783.36,0,-1616.95,-1601.3 dDocent_Contig_6949 17 . A C 2223.48 . AB=0.326923;ABP=70.66;AC=3;AF=0.25;AN=12;AO=105;CIGAR=1X;DP=787;DPB=787;DPRA=1.47447;EPP=231.015;EPPR=1481.78;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4192;QR=26782;RO=681;RPL=0;RPP=231.015;RPPR=1481.78;RPR=105;RUN=1;SAF=105;SAP=231.015;SAR=0;SRF=681;SRP=1481.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:58:39,19:39:1535:19:763:-51.5318,0,-120.94 0/1:117:84,32:84:3323:32:1278:-79.956,0,-263.825 0/0:59:57,2:57:2240:2:77:0,-10.4526,-194.471 0/1:85:51,34:51:2027:34:1349:-96.0825,0,-157.036 0/0:374:356,18:356:13975:18:725:0,-47.0103,-1191.23 0/0:94:94,0:94:3682:0:0:0,-28.2968,-331.418 dDocent_Contig_6950 7 . A C 1642.64 . AB=0.267974;ABP=146.1;AC=6;AF=0.5;AN=12;AO=82;CIGAR=1X;DP=306;DPB=306;DPRA=0;EPP=164.123;EPPR=396.417;GTI=0;LEN=1;MEANALT=1.16667;MQM=51.2195;MQMR=59.4978;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.585366;PAIREDR=0.573991;PAO=0;PQA=0;PQR=0;PRO=0;QA=3122;QR=8480;RO=223;RPL=0;RPP=181.071;RPPR=487.249;RPR=82;RUN=1;SAF=80;SAP=164.123;SAR=2;SRF=212;SRP=396.417;SRR=11;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:50:33,17:33:1253:17:645:-40.6054,0,-97.9855 0/1:49:29,20:29:1098:20:778:-51.093,0,-83.3527 0/1:36:31,5:31:1192:5:195:-6.84149,0,-96.7403 0/1:74:58,15:58:2199:15:562:-24.3966,0,-175.771 0/1:53:39,14:39:1476:14:520:-29.1857,0,-117.162 0/1:44:33,11:33:1262:11:422:-23.364,0,-100.625 dDocent_Contig_6951 98 . N A 939.841 . AB=0.235294;ABP=13.3567;AC=12;AF=1;AN=12;AO=20;CIGAR=1M3I6X7I4X;DP=35;DPB=66.0909;DPRA=0;EPP=46.4397;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=54;MQMR=0;NS=6;NUMALT=2;ODDS=3.46945e-18;PAIRED=0.6;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=697;QR=0;RO=0;RPL=20;RPP=46.4397;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=46.4397;SAR=20;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:3:0,0,3:0:0:0,3:0,105:-9.77688,-9.77688,-9.77688,-0.90309,-0.90309,0 1|1:7:0,5,1:0:0:5,1:185,29:-17.3847,-2.23017,-0.725025,-15.1337,0,-14.8326 1|1:1:0,0,1:0:0:0,1:0,37:-3.69783,-3.69783,-3.69783,-0.30103,-0.30103,0 1|1:10:0,6,3:0:0:6,3:225,102:-26.6982,-8.2512,-6.44502,-18.4348,0,-17.5318 1|1:1:0,0,1:0:0:0,1:0,36:-3.55862,-3.55862,-3.55862,-0.30103,-0.30103,0 1|1:13:0,0,11:0:0:0,11:0,388:-34.8092,-34.8092,-34.8092,-3.31133,-3.31133,0 dDocent_Contig_6952 107 . N T 96.1056 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=103;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:103:-9.61002,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6953 64 . A C 22737.5 . AB=0.334481;ABP=624.805;AC=6;AF=0.5;AN=12;AO=874;CIGAR=1X;DP=2613;DPB=2613;DPRA=0;EPP=1900.88;EPPR=3735.77;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=34094;QR=67497;RO=1719;RPL=874;RPP=1900.88;RPPR=3735.77;RPR=0;RUN=1;SAF=874;SAP=1900.88;SAR=0;SRF=1719;SRP=3735.77;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:344:165,164:165:6426:164:6380:-474.549,0,-478.693 0/1:458:377,79:377:14876:79:3048:-136.757,0,-1200.1 0/1:341:249,91:249:9821:91:3603:-221.554,0,-780.554 0/1:429:273,156:273:10671:156:6105:-420.088,0,-830.633 0/1:543:342,200:342:13363:200:7816:-539.536,0,-1038.25 0/1:498:313,184:313:12340:184:7142:-492.488,0,-959.749 dDocent_Contig_6954 37 . G T 120.541 . AB=0.21875;ABP=24.9965;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=127;DPB=127;DPRA=2.37931;EPP=24.725;EPPR=257.073;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.5;PAIREDR=0.965812;PAO=0;PQA=0;PQR=0;PRO=0;QA=357;QR=4635;RO=117;RPL=0;RPP=24.725;RPPR=257.073;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=117;SRP=257.073;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:735:0:0:0,-5.71957,-66.4673 0/1:32:25,7:25:1006:7:254:-13.577,0,-81.2007 0/0:37:34,3:34:1328:3:103:0,-1.52809,-110.172 0/0:16:16,0:16:641:0:0:0,-4.81648,-58.0243 0/0:10:10,0:10:400:0:0:0,-3.0103,-36.3601 0/0:13:13,0:13:525:0:0:0,-3.91339,-47.5972 dDocent_Contig_6955 66 . G T 31.0725 . AB=0.0943396;ABP=154.522;AC=1;AF=0.0833333;AN=12;AO=32;CIGAR=1X;DP=1139;DPB=1139;DPRA=0.730022;EPP=72.4974;EPPR=2406.83;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.96875;PAIREDR=0.990967;PAO=0;PQA=0;PQR=0;PRO=0;QA=1219;QR=43437;RO=1107;RPL=32;RPP=72.4974;RPPR=2406.83;RPR=0;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=1107;SRP=2406.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:173:159,14:159:6241:14:527:0,-4.31984,-513.732 0/0:198:195,3:195:7704:3:90:0,-51.2141,-684.605 0/1:106:96,10:96:3769:10:402:-4.62979,0,-307.331 0/0:199:194,5:194:7631:5:200:0,-41.5251,-668.051 0/0:222:222,0:222:8693:0:0:0,-66.8287,-781.931 0/0:241:241,0:241:9399:0:0:0,-72.5482,-845.4 dDocent_Contig_6956 144 . G T 4914.84 . AB=0.551829;ABP=10.6634;AC=5;AF=0.416667;AN=12;AO=184;CIGAR=1X;DP=389;DPB=389;DPRA=0;EPP=402.561;EPPR=448.162;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.994565;PAIREDR=0.995122;PAO=0;PQA=0;PQR=0;PRO=0;QA=6747;QR=7716;RO=205;RPL=0;RPP=402.561;RPPR=448.162;RPR=184;RUN=1;SAF=0;SAP=402.561;SAR=184;SRF=0;SRP=448.162;SRR=205;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:51:29,22:29:1076:22:755:-52.9002,0,-81.7835 0/0:61:58,3:58:2230:3:102:0,-8.84679,-191.4 0/1:68:46,22:46:1736:22:828:-54.3692,0,-136.015 0/1:45:27,18:27:971:18:680:-47.9844,0,-74.1226 0/1:82:33,49:33:1242:49:1833:-140.531,0,-87.3751 0/1:82:12,70:12:461:70:2549:-204.921,0,-17.1558 dDocent_Contig_6957 1 . N G 76.8682 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6958 26 . G A 47.1611 . AB=0.119403;ABP=87.3088;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=209;DPB=209;DPRA=0.917431;EPP=22.5536;EPPR=437.305;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.222222;PAIREDR=0.735;PAO=0;PQA=0;PQR=0;PRO=0;QA=345;QR=7922;RO=200;RPL=0;RPP=22.5536;RPPR=437.305;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=200;SRP=437.305;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:22,3:22:867:3:122:-3.84674,0,-70.8119 0/0:38:38,0:38:1516:0:0:0,-11.4391,-136.681 0/1:42:37,5:37:1459:5:182:-4.08959,0,-118.914 0/0:33:32,1:32:1261:1:41:0,-5.83942,-109.668 0/0:31:31,0:31:1235:0:0:0,-9.33193,-111.419 0/0:40:40,0:40:1584:0:0:0,-12.0412,-142.796 dDocent_Contig_6959 21 . G C 103790 . AB=0.238167;ABP=1185.62;AC=1;AF=0.0833333;AN=12;AO=476;CIGAR=7M4D3M5I1M1X1M1X;DP=4593;DPB=3263.33;DPRA=1.42726;EPP=1036.63;EPPR=1334.12;GTI=0;LEN=1;MEANALT=10;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=18735;QR=23711;RO=613;RPL=0;RPP=1036.63;RPPR=1334.12;RPR=476;RUN=1;SAF=476;SAP=1036.63;SAR=0;SRF=613;SRP=1334.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:491:70,0,414:70:2690:0,414:0,14492:-1157.91,-1178.98,-1399.8,0,-220.864,-96.2376 0|0:810:34,3,768:34:1333:3,768:118,26752:-2286.49,-2287.02,-2395.74,-121.528,-221.483,0 0|0:483:39,0,438:39:1516:0,438:0,15319:-1241.58,-1253.32,-1377.91,-7.24839,-131.851,0 0|0:823:64,0,737:64:2498:0,737:0,25904:-2105.48,-2124.74,-2330.09,-16.4715,-221.859,0 0|0:1007:287,163,548:287:11051:163,548:6376,19064:-1463.47,-1025.65,-1883.94,0,-383.137,-742.381 1|0:979:119,310,537:119:4623:310,537:12241,18893:-2129.33,-1157.89,-1444.45,-627.382,0,-845.604 dDocent_Contig_6960 12 . G A 30155 . AB=0.814433;ABP=1085.9;AC=6;AF=0.5;AN=12;AO=1027;CIGAR=1X;DP=1261;DPB=1261;DPRA=0;EPP=2233.11;EPPR=511.135;GTI=0;LEN=1;MEANALT=1;MQM=53.5949;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.940171;PAO=0;PQA=0;PQR=0;PRO=0;QA=39597;QR=8905;RO=234;RPL=0;RPP=2233.11;RPPR=511.135;RPR=1027;RUN=1;SAF=1027;SAP=2233.11;SAR=0;SRF=234;SRP=511.135;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:226:52,174:52:1957:174:6724:-513.322,0,-108.33 0/1:252:47,205:47:1804:205:7893:-618.858,0,-86.7403 0/1:215:51,164:51:1948:164:6360:-495.4,0,-110.83 0/1:195:18,177:18:664:177:6802:-499.326,0,-1.38568 0/1:177:20,157:20:765:157:6039:-469.293,0,-15.8909 0/1:196:46,150:46:1767:150:5779:-429.894,0,-100.267 dDocent_Contig_6961 23 . G A 241.155 . AB=0.140741;ABP=154.354;AC=3;AF=0.25;AN=12;AO=24;CIGAR=1X;DP=255;DPB=255;DPRA=0;EPP=55.1256;EPPR=504.62;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.708333;PAIREDR=0.766234;PAO=0;PQA=0;PQR=0;PRO=0;QA=969;QR=9179;RO=231;RPL=0;RPP=55.1256;RPPR=504.62;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=231;SRP=504.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:27,5:27:1064:5:204:-9.11107,0,-86.4175 0/0:34:32,2:32:1302:2:81:0,-2.54929,-109.753 0/1:58:50,8:50:1971:8:323:-11.9788,0,-160.13 0/0:36:35,1:35:1377:1:41:0,-6.74251,-120.092 0/0:50:48,2:48:1948:2:82:0,-7.27182,-167.728 0/1:45:39,6:39:1517:6:238:-8.24743,0,-123.226 dDocent_Contig_6962 1 . N G 311.289 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=326;QR=0;RO=0;RPL=0;RPP=20.3821;RPPR=0;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:123:-11.4648,-0.90309,0 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:162:-14.9667,-1.20412,0 dDocent_Contig_6963 7 . A T 241.177 . AB=0.168421;ABP=93.7321;AC=2;AF=0.166667;AN=12;AO=19;CIGAR=1X;DP=261;DPB=261;DPRA=1.28947;EPP=44.2683;EPPR=528.507;GTI=0;LEN=1;MEANALT=1;MQM=54.6316;MQMR=59.6322;NS=6;NUMALT=1;ODDS=0;PAIRED=0.631579;PAIREDR=0.764463;PAO=0;PQA=0;PQR=0;PRO=0;QA=730;QR=9304;RO=242;RPL=0;RPP=44.2683;RPPR=528.507;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=242;SRP=528.507;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:39,0:39:1503:0:0:0,-11.7402,-135.544 0/0:52:49,3:49:1878:3:114:0,-5.29745,-158.758 0/0:47:47,0:47:1820:0:0:0,-14.1484,-164.04 0/0:28:28,0:28:1080:0:0:0,-8.42884,-97.5048 0/1:51:40,11:40:1533:11:426:-23.1181,0,-122.873 0/1:44:39,5:39:1490:5:190:-4.22104,0,-121.022 dDocent_Contig_6965 12 . C T 2200.22 . AB=0.163529;ABP=838.859;AC=3;AF=0.25;AN=12;AO=192;CIGAR=1X;DP=1851;DPB=1851;DPRA=0;EPP=419.933;EPPR=3603.31;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999397;PAO=0;PQA=0;PQR=0;PRO=0;QA=7364;QR=63266;RO=1658;RPL=0;RPP=419.933;RPPR=3603.31;RPR=192;RUN=1;SAF=192;SAP=419.933;SAR=0;SRF=1658;SRP=3603.31;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:253:211,41:211:8027:41:1577:-66.011,0,-646.06 0/1:385:316,69:316:12104:69:2640:-121.867,0,-972.954 0/1:212:183,29:183:6985:29:1121:-37.3661,0,-564.704 0/0:316:295,21:295:11259:21:810:0,-21.9027,-939.632 0/0:345:340,5:340:12939:5:187:0,-86.6661,-1146.76 0/0:340:313,27:313:11952:27:1029:0,-9.43999,-982.268 dDocent_Contig_6966 31 . C A 5818.59 . AB=0.156785;ABP=2332.76;AC=2;AF=0.166667;AN=12;AO=359;CIGAR=1X;DP=5969;DPB=5969;DPRA=0.99599;EPP=782.569;EPPR=12180.6;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=59.9998;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997214;PAIREDR=0.999465;PAO=0;PQA=0;PQR=0;PRO=0;QA=14184;QR=223234;RO=5608;RPL=0;RPP=782.569;RPPR=12180.6;RPR=359;RUN=1;SAF=359;SAP=782.569;SAR=0;SRF=5608;SRP=12180.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:897:896,0:896:35491:0:0:0,-269.723,-3190.56 0/0:1098:1098,0:1098:43795:0:0:0,-330.531,-3937.42 0/0:706:705,1:705:28109:1:40:0,-208.531,-2523.3 0/0:991:990,1:990:39372:1:19:0,-296.421,-3537.92 0/1:1253:1114,139:1114:44334:139:5492:-116.937,0,-3608.67 0/1:1024:805,218:805:32133:218:8633:-468.144,0,-2580.71 dDocent_Contig_6967 15 . C T 56.3519 . AB=0.214286;ABP=12.937;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=125;DPB=125;DPRA=0.630631;EPP=9.52472;EPPR=267.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.901639;PAO=0;PQA=0;PQR=0;PRO=0;QA=122;QR=4824;RO=122;RPL=0;RPP=9.52472;RPPR=267.93;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=122;SRP=267.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:641:0:0:0,-4.81648,-58.0238 0/0:18:18,0:18:699:0:0:0,-5.41854,-63.2341 0/1:14:11,3:11:433:3:122:-7.15807,0,-35.1076 0/0:15:15,0:15:603:0:0:0,-4.51545,-54.6094 0/0:21:21,0:21:831:0:0:0,-6.32163,-75.1064 0/0:41:41,0:41:1617:0:0:0,-12.3422,-145.771 dDocent_Contig_6968 140 . C T 120809 . AB=0.0532544;ABP=2346.76;AC=2;AF=0.166667;AN=12;AO=112;CIGAR=7M5D1M1X;DP=4666;DPB=3133.79;DPRA=0.894906;EPP=246.215;EPPR=804.284;GTI=0;LEN=1;MEANALT=9.33333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4442;QR=14225;RO=369;RPL=0;RPP=246.215;RPPR=804.284;RPR=112;RUN=1;SAF=0;SAP=246.215;SAR=112;SRF=0;SRP=804.284;SRR=369;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:831:31,57,0,739:31:1189:57,0,739:2126,0,27155:-2335.11,-2170.42,-2250.85,-2344.45,-2268.01,-2442.03,-124.87,-48.4353,-222.461,0 0|0:879:30,59,40,740:30:1185:59,40,740:2111,1601,27303:-2348.75,-2185.7,-2265.46,-2225.89,-2151.33,-2311.37,-125.243,-50.6948,-90.8674,0 1|0:675:27,116,49,476:27:1042:116,49,476:4261,1933,17408:-1676.73,-1336.6,-1387.24,-1525.83,-1263.13,-1596.64,-262.695,0,-189.222,-204.97 1|0:677:9,92,23,548:9:356:92,23,548:3394,908,20197:-1896.84,-1622.02,-1623.63,-1824.84,-1576.61,-1847.22,-248.227,0,-202.814,-112.563 0|0:900:182,1,0,704:182:6971:1,0,704:26,0,25525:-2028.96,-2081.71,-2653.46,-2083.75,-2653.76,-2655.8,0,-570.164,-572.202,-360.277 0|0:704:90,0,0,606:90:3482:0,0,606:0,0,22364:-1801.72,-1828.81,-2114.81,-1828.81,-2114.81,-2114.81,0,-286.075,-286.075,-103.65 dDocent_Contig_6970 29 . C T 2727.18 . AB=0.273543;ABP=201.676;AC=2;AF=0.166667;AN=12;AO=125;CIGAR=1X;DP=1121;DPB=1121;DPRA=1.52477;EPP=274.444;EPPR=2165.8;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4669;QR=39756;RO=996;RPL=0;RPP=274.444;RPPR=2165.8;RPR=125;RUN=1;SAF=125;SAP=274.444;SAR=0;SRF=996;SRP=2165.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:192:192,0:192:7673:0:0:0,-57.7978,-690.166 0/0:231:228,3:228:9066:3:116:0,-58.7205,-804.6 0/0:154:154,0:154:6147:0:0:0,-46.3586,-552.969 0/0:98:98,0:98:3915:0:0:0,-29.5009,-352.345 0/1:211:157,54:157:6258:54:2021:-118.601,0,-499.448 0/1:235:167,68:167:6697:68:2532:-157.339,0,-531.684 dDocent_Contig_6971 16 . T C 4618.08 . AB=0.231293;ABP=556.16;AC=6;AF=0.5;AN=12;AO=204;CIGAR=1X;DP=882;DPB=882;DPRA=0;EPP=445.991;EPPR=1475.27;GTI=0;LEN=1;MEANALT=1;MQM=59.4853;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.892157;PAIREDR=0.955752;PAO=0;PQA=0;PQR=0;PRO=0;QA=8220;QR=27135;RO=678;RPL=0;RPP=445.991;RPPR=1475.27;RPR=204;RUN=1;SAF=204;SAP=445.991;SAR=0;SRF=678;SRP=1475.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:135:116,19:116:4651:19:765:-28.5321,0,-377.846 0/1:178:138,40:138:5560:40:1623:-92.7119,0,-446.623 0/1:138:113,25:113:4510:25:1010:-49.653,0,-364.286 0/1:185:126,59:126:5059:59:2364:-154.425,0,-399.475 0/1:113:84,29:84:3372:29:1168:-71.3795,0,-269.494 0/1:133:101,32:101:3983:32:1290:-76.3281,0,-318.416 dDocent_Contig_6972 10 . G T 170.926 . AB=0.180328;ABP=57.1547;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=468;DPB=468;DPRA=0.918033;EPP=33.4109;EPPR=988.859;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.984581;PAO=0;PQA=0;PQR=0;PRO=0;QA=516;QR=18073;RO=454;RPL=0;RPP=33.4109;RPPR=988.859;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=454;SRP=988.859;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:58:56,2:56:2228:2:72:0,-10.6231,-193.852 0/0:105:104,1:104:4155:1:37:0,-27.9103,-370.225 0/0:86:86,0:86:3412:0:0:0,-25.8886,-307.128 0/1:61:50,11:50:1986:11:407:-18.6155,0,-160.571 0/0:76:76,0:76:3008:0:0:0,-22.8783,-270.807 0/0:82:82,0:82:3284:0:0:0,-24.6845,-295.619 dDocent_Contig_6973 19 . T C 406.789 . AB=0.161074;ABP=151.676;AC=1;AF=0.0833333;AN=12;AO=38;CIGAR=1X;DP=728;DPB=728;DPRA=0.689542;EPP=85.5263;EPPR=1501.33;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998551;PAO=0;PQA=0;PQR=0;PRO=0;QA=1510;QR=27570;RO=690;RPL=0;RPP=85.5263;RPPR=1501.33;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=690;SRP=1501.33;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:101:97,4:97:3831:4:154:0,-16.1728,-330.568 0/0:106:99,7:99:3947:7:278:0,-6.52161,-329.83 0/0:66:63,3:63:2529:3:114:0,-9.23789,-217.114 0/1:149:125,24:125:5046:24:964:-42.2018,0,-409.139 0/0:189:189,0:189:7535:0:0:0,-56.8947,-677.769 0/0:117:117,0:117:4682:0:0:0,-35.2205,-421.281 dDocent_Contig_6974 107 . N T 249.023 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=10.1503;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=273;QR=0;RO=0;RPL=0;RPP=20.3821;RPPR=0;RPR=8;RUN=1;SAF=0;SAP=20.3821;SAR=8;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:8:0,8:0:0:8:273:-24.9022,-2.40824,0 dDocent_Contig_6975 15 . G C 161.206 . AB=0.138298;ABP=109.828;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=2X;DP=364;DPB=364;DPRA=0.828467;EPP=37.7539;EPPR=758.683;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5625;PAIREDR=0.795977;PAO=0;PQA=0;PQR=0;PRO=0;QA=632;QR=13805;RO=348;RPL=0;RPP=37.7539;RPPR=758.683;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=348;SRP=758.683;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:46:41,5:41:1645:5:201:-4.62372,0,-134.431 0|0:78:78,0:78:3082:0:0:0,-23.4803,-277.475 0|1:48:40,8:40:1586:8:320:-14.7186,0,-128.53 0|0:74:72,2:72:2884:2:70:0,-15.6307,-253.021 0|0:59:59,0:59:2335:0:0:0,-17.7608,-210.317 0|0:59:58,1:58:2273:1:41:0,-13.6662,-200.645 dDocent_Contig_6976 1 . N G 191.765 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=201;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:119:-11.095,-0.90309,0 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 dDocent_Contig_6977 1 . N G 303.677 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=313;QR=0;RO=0;RPL=0;RPP=20.3821;RPPR=0;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:163:-15.0584,-1.20412,0 1/1:1:0,1:0:0:1:36:-3.59827,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:38:-3.79727,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:76:-7.21354,-0.60206,0 dDocent_Contig_6978 32 . A T 64.7674 . AB=0.135593;ABP=71.062;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=159;DPB=159;DPRA=2.06452;EPP=26.8965;EPPR=324.388;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=414;QR=5893;RO=148;RPL=0;RPP=26.8965;RPPR=324.388;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=148;SRP=324.388;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:8:8,0:8:326:0:0:0,-2.40824,-29.7099 0/0:40:38,2:38:1511:2:79:0,-4.54357,-128.743 0/0:23:23,0:23:925:0:0:0,-6.92369,-83.5522 0/1:22:19,3:19:751:3:119:-4.47235,0,-61.2887 0/0:29:28,1:28:1114:1:38:0,-4.9326,-96.7497 0/1:37:32,5:32:1266:5:178:-5.22595,0,-103.069 dDocent_Contig_6979 14 . T A 3397.35 . AB=0.24159;ABP=382.334;AC=4;AF=0.333333;AN=12;AO=167;CIGAR=1X;DP=1038;DPB=1038;DPRA=0;EPP=365.646;EPPR=1894.36;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6371;QR=31832;RO=871;RPL=0;RPP=365.646;RPPR=1894.36;RPR=167;RUN=1;SAF=167;SAP=365.646;SAR=0;SRF=871;SRP=1894.36;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:143:114,29:114:4206:29:1101:-56.3332,0,-335.612 0/1:151:116,35:116:4140:35:1334:-74.8796,0,-327.261 0/1:162:123,39:123:4537:39:1481:-84.7816,0,-359.655 0/1:198:143,55:143:5191:55:2115:-130.962,0,-407.661 0/0:184:183,1:183:6723:1:34:0,-51.9906,-601.639 0/0:200:192,8:192:7035:8:306:0,-32.307,-605.187 dDocent_Contig_6980 98 . N C 180.202 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=179;QR=0;RO=0;RPL=8;RPP=20.3821;RPPR=0;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:53:-5.03451,-0.60206,0 1/1:2:0,2:0:0:2:62:-5.88849,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:17:-1.61499,-0.60206,0 1/1:1:0,1:0:0:1:30:-2.99957,-0.30103,0 1/1:1:0,1:0:0:1:17:-1.69998,-0.30103,0 dDocent_Contig_6981 98 . N C 274.428 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=11;CIGAR=1X;DP=11;DPB=11;DPRA=0;EPP=26.8965;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=291;QR=0;RO=0;RPL=11;RPP=26.8965;RPPR=0;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:50:-4.74974,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:99:-9.15547,-1.20412,0 1/1:5:0,5:0:0:5:142:-13.06,-1.50515,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_6982 45 . A G 11141 . AB=0.352055;ABP=280.578;AC=2;AF=0.166667;AN=12;AO=520;CIGAR=1X;DP=2265;DPB=2265;DPRA=1.93026;EPP=1132.18;EPPR=3792.23;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=17489;QR=59095;RO=1745;RPL=0;RPP=1132.18;RPPR=3792.23;RPR=520;RUN=1;SAF=520;SAP=1132.18;SAR=0;SRF=1745;SRP=3792.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:171:171,0:171:5723:0:0:0,-51.4761,-515.195 0/0:120:116,4:116:3901:4:128:0,-24.2865,-339.454 0/0:219:217,2:217:7559:2:64:0,-59.847,-674.271 0/0:295:295,0:295:9921:0:0:0,-88.8038,-892.879 0/1:752:461,291:461:15527:291:9802:-655.817,0,-1170.84 0/1:708:485,223:485:16464:223:7495:-461.508,0,-1268.35 dDocent_Contig_6983 15 . A G 1124.2 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=3;CIGAR=6M1X11M;DP=303;DPB=313;DPRA=2.15385;EPP=9.52472;EPPR=495.935;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.995595;PAO=0;PQA=0;PQR=0;PRO=0;QA=115;QR=8789;RO=227;RPL=0;RPP=9.52472;RPPR=495.935;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=227;SRP=495.935;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:56:38,14,0:38:1475:14,0:526,0:-31.6409,0,-116.975,-43.08,-121.189,-164.273 0|0:68:47,14,0:47:1814:14,0:547,0:-30.8424,0,-144.779,-44.9908,-148.993,-193.962 0|0:48:31,16,0:31:1225:16,0:612,0:-40.8866,0,-96.0069,-50.2185,-100.823,-151.036 0|0:49:37,9,0:37:1424:9,0:335,0:-16.2715,0,-114.203,-27.4096,-116.912,-144.325 0|0:26:24,0,0:24:925:0,0:0,0:0,-7.22472,-83.1637,-7.22472,-83.1637,-83.1637 0|0:56:50,0,3:50:1926:0,3:0,115:0,-15.0515,-173.184,-5.61879,-163.746,-162.843 dDocent_Contig_6984 58 . T G 1966.96 . AB=0.27619;ABP=140.061;AC=2;AF=0.166667;AN=12;AO=103;CIGAR=1X;DP=855;DPB=855;DPRA=1.3038;EPP=226.672;EPPR=1629.44;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.990291;PAIREDR=0.99466;PAO=0;PQA=0;PQR=0;PRO=0;QA=3883;QR=27384;RO=749;RPL=103;RPP=226.672;RPPR=1629.44;RPR=0;RUN=1;SAF=103;SAP=226.672;SAR=0;SRF=749;SRP=1629.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:126:122,4:122:4450:4:158:0,-23.3293,-385.974 0/0:177:163,12:163:6002:12:454:0,-11.7401,-498.98 0/0:88:88,0:88:3216:0:0:0,-26.4906,-289.587 0/0:149:149,0:149:5431:0:0:0,-44.8535,-488.823 0/1:145:106,38:106:3901:38:1452:-87.1766,0,-307.448 0/1:170:121,49:121:4384:49:1819:-112.741,0,-343.479 dDocent_Contig_6985 10 . G A 469.598 . AB=0.135338;ABP=310.249;AC=3;AF=0.25;AN=12;AO=49;CIGAR=1X;DP=588;DPB=588;DPRA=0;EPP=109.412;EPPR=1173.43;GTI=0;LEN=1;MEANALT=1;MQM=59.9388;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.734694;PAIREDR=0.860853;PAO=0;PQA=0;PQR=0;PRO=0;QA=1963;QR=20947;RO=539;RPL=0;RPP=109.412;RPPR=1173.43;RPR=49;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=539;SRP=1173.43;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:98:90,8:90:3455:8:327:-0.299166,0,-281.546 0/0:114:109,5:109:4234:5:200:0,-15.9375,-362.689 0/1:90:70,20:70:2769:20:799:-45.1312,0,-222.249 0/1:78:70,8:70:2729:8:313:-5.04894,0,-222.273 0/0:133:127,6:127:4949:6:242:0,-17.8795,-423.204 0/0:75:73,2:73:2811:2:82:0,-14.7976,-245.343 dDocent_Contig_6986 26 . G C 34.4701 . AB=0.101695;ABP=84.3117;AC=1;AF=0.0833333;AN=12;AO=24;CIGAR=1X;DP=1141;DPB=1141;DPRA=0.964286;EPP=55.1256;EPPR=2428.54;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.625;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=957;QR=44270;RO=1117;RPL=0;RPP=55.1256;RPPR=2428.54;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=1117;SRP=2428.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:59:53,6:53:2098:6:245:-4.6687,0,-171.242 0/0:196:196,0:196:7753:0:0:0,-59.0019,-697.365 0/0:96:95,1:95:3743:1:40:0,-24.9032,-332.891 0/0:225:218,7:218:8638:7:275:0,-42.6151,-751.813 0/0:186:180,6:180:7205:6:234:0,-34.5643,-626.663 0/0:379:375,4:375:14833:4:163:0,-99.0319,-1318.78 dDocent_Contig_6987 26 . C T 1144.43 . AB=0.116601;ABP=1295.11;AC=2;AF=0.166667;AN=12;AO=121;CIGAR=1X;DP=2574;DPB=2574;DPRA=1.54936;EPP=265.758;EPPR=5327.46;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995922;PAO=0;PQA=0;PQR=0;PRO=0;QA=4810;QR=98513;RO=2452;RPL=0;RPP=265.758;RPPR=5327.46;RPR=121;RUN=1;SAF=121;SAP=265.758;SAR=0;SRF=2452;SRP=5327.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:370:370,0:370:14835:0:0:0,-111.381,-1333.98 0/0:477:475,2:475:19141:2:79:0,-136.094,-1713.53 0/0:258:258,0:258:10370:0:0:0,-77.6657,-932.568 0/0:457:456,1:456:18240:1:41:0,-133.476,-1635.96 0/1:555:487,67:487:19552:67:2661:-72.4368,0,-1590.81 0/1:457:406,51:406:16375:51:2029:-45.2276,0,-1334.79 dDocent_Contig_6988 1 . N G 74.9833 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=79;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:79:-7.49724,-0.60206,0 dDocent_Contig_6989 1 . N G 140.49 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=7.37776;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=152;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:152:-14.0487,-1.20412,0 ./.:.:.:.:.:.:.:. dDocent_Contig_6990 25 . A C 135.659 . AB=0.103306;ABP=333.792;AC=1;AF=0.0833333;AN=12;AO=81;CIGAR=1X3M1X;DP=1683;DPB=1682.8;DPRA=0;EPP=178.9;EPPR=3368.81;GTI=0;LEN=1;MEANALT=3.66667;MQM=51.1358;MQMR=59.9499;NS=6;NUMALT=2;ODDS=0;PAIRED=0.444444;PAIREDR=0.453787;PAO=0;PQA=0;PQR=0;PRO=0;QA=3218;QR=61491;RO=1558;RPL=0;RPP=178.9;RPPR=3386.16;RPR=81;RUN=1;SAF=81;SAP=178.9;SAR=0;SRF=1556;SRP=3368.81;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:214:199,8,1:199:7798:8,1:311,41:0,-34.4608,-673.29,-56.5182,-672.314,-697.439 0|0:295:274,17,0:274:10853:17,0:682,0:0,-28.3705,-916.506,-82.4822,-921.623,-975.75 0|0:212:199,8,0:199:7870:8,0:320,0:0,-34.3273,-679.582,-59.905,-681.991,-707.559 0|1:242:216,25,0:216:8564:25,0:1001,0:-15.0888,0,-697.374,-80.1113,-704.9,-785.029 0|0:349:334,14,0:334:13209:14,0:553,0:0,-56.2585,-1139.04,-100.544,-1143.26,-1187.56 0|0:371:336,9,19:336:13197:9,19:351,771:0,-72.6774,-1154.05,-37.565,-1093.18,-1115.94 dDocent_Contig_6991 98 . N C 237.485 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=240;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:40:-3.7987,-0.60206,0 1/1:2:0,2:0:0:2:46:-4.36917,-0.60206,0 1/1:2:0,2:0:0:2:64:-6.07837,-0.60206,0 1/1:2:0,2:0:0:2:55:-5.22438,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_6992 13 . C A 6383.65 . AB=0.164462;ABP=2220.9;AC=3;AF=0.25;AN=12;AO=460;CIGAR=1X;DP=4463;DPB=4463;DPRA=0;EPP=1001.89;EPPR=8688.9;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99925;PAO=0;PQA=0;PQR=0;PRO=0;QA=18181;QR=160089;RO=4000;RPL=0;RPP=1001.89;RPPR=8688.9;RPR=460;RUN=1;SAF=460;SAP=1001.89;SAR=0;SRF=4000;SRP=8688.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:720:696,23:696:27752:23:915:0,-133.897,-2412.55 0/1:789:714,74:714:28532:74:2876:-21.3449,0,-2327.68 0/0:737:718,19:718:28720:19:750:0,-154.035,-2514.37 0/0:738:692,45:692:27762:45:1775:0,-62.2947,-2336.06 0/1:780:680,100:680:27266:100:4002:-125.366,0,-2216.66 0/1:699:500,199:500:20057:199:7863:-496.876,0,-1592.99 dDocent_Contig_6993 27 . G T 1473.09 . AB=0.144949;ABP=750.865;AC=3;AF=0.25;AN=12;AO=143;CIGAR=1X2M1X;DP=1588;DPB=1588;DPRA=0;EPP=313.531;EPPR=3069.13;GTI=0;LEN=1;MEANALT=3.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.987252;PAO=0;PQA=0;PQR=0;PRO=0;QA=5646;QR=54430;RO=1412;RPL=0;RPP=313.531;RPPR=3069.13;RPR=143;RUN=1;SAF=143;SAP=313.531;SAR=0;SRF=1412;SRP=3069.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:248:209,33,4:209:8020:33,4:1286,156:-42.7976,0,-648.336,-92.8895,-645.447,-749.941 0|1:298:260,34,0:260:10021:34,0:1337,0:-31.7461,0,-812.606,-110.014,-822.841,-932.817 0|1:137:90,32,10:90:3464:32,10:1276,404:-77.9873,0,-274.744,-71.7721,-251.068,-353.142 0|0:276:258,15,1:258:9929:15,1:592,9:0,-28.706,-839.618,-77.1717,-843.626,-892.032 0|0:286:277,7,0:277:10668:7,0:270,0:0,-61.225,-934.968,-83.3853,-937.076,-959.247 0|0:343:318,22,0:318:12328:22,0:885,0:0,-22.7299,-1028.94,-95.7275,-1035.56,-1108.49 dDocent_Contig_6994 21 . T C 2440.66 . AB=0.121397;ABP=2249.06;AC=3;AF=0.25;AN=12;AO=257;CIGAR=1X;DP=3416;DPB=3416;DPRA=0.882726;EPP=561.079;EPPR=6860.52;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10344;QR=125540;RO=3158;RPL=0;RPP=561.079;RPPR=6860.52;RPR=257;RUN=1;SAF=257;SAP=561.079;SAR=0;SRF=3158;SRP=6860.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:417:365,52:365:14505:52:2072:-61.132,0,-1178.84 0/1:811:728,83:728:28869:83:3347:-57.1303,0,-2351.52 0/0:429:407,22:407:16268:22:895:0,-48.2873,-1381.94 0/0:552:535,16:535:21301:16:648:0,-107.624,-1856.63 0/0:631:631,0:631:25128:0:0:0,-189.95,-2259.29 0/1:576:492,84:492:19469:84:3382:-131.025,0,-1577.24 dDocent_Contig_6995 90 . T G 970.995 . AB=0.272251;ABP=89.062;AC=6;AF=0.5;AN=12;AO=52;CIGAR=1X3M1X;DP=191;DPB=190.8;DPRA=0;EPP=115.927;EPPR=300.502;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.576923;PAIREDR=0.846715;PAO=0;PQA=0;PQR=0;PRO=0;QA=1804;QR=4672;RO=137;RPL=0;RPP=115.927;RPPR=300.502;RPR=52;RUN=1;SAF=0;SAP=115.927;SAR=52;SRF=0;SRP=300.502;SRR=137;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:41:37,4:37:1257:4:141:-0.694871,0,-101.089 0|1:31:23,8:23:788:8:268:-15.1146,0,-61.9055 0|1:26:15,11:15:516:11:386:-27.2501,0,-38.9407 0|1:33:16,16:16:548:16:561:-40.8375,0,-39.663 0|1:29:21,8:21:705:8:280:-16.8101,0,-55.034 0|1:31:25,5:25:858:5:168:-6.30549,0,-68.4246 dDocent_Contig_6996 80 . T C 87776.3 . AB=0.833065;ABP=3593.18;AC=6;AF=0.5;AN=12;AO=3104;CIGAR=1X;DP=3726;DPB=3726;DPRA=0;EPP=6743.26;EPPR=1353.67;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998711;PAIREDR=0.998392;PAO=0;PQA=0;PQR=0;PRO=0;QA=110146;QR=22423;RO=622;RPL=3104;RPP=6743.26;RPPR=1353.67;RPR=0;RUN=1;SAF=3104;SAP=6743.26;SAR=0;SRF=622;SRP=1353.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:594:121,473:121:4347:473:16119:-1271.72,0,-212.569 0/1:661:89,572:89:3189:572:19561:-1561.22,0,-88.2354 0/1:350:46,304:46:1659:304:11081:-891.743,0,-44.2282 0/1:609:113,496:113:4073:496:17942:-1430.94,0,-183.406 0/1:777:130,647:130:4766:647:23280:-1860.54,0,-195.161 0/1:735:123,612:123:4389:612:22163:-1772.69,0,-173.9 dDocent_Contig_6997 15 . G A 66066.6 . AB=0.781148;ABP=1904.13;AC=6;AF=0.5;AN=12;AO=2163;CIGAR=1X2M1X;DP=2769;DPB=2769;DPRA=0;EPP=4699.91;EPPR=1162.58;GTI=0;LEN=1;MEANALT=4.33333;MQM=59.5039;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.994914;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82822;QR=20420;RO=534;RPL=0;RPP=4699.91;RPPR=1162.58;RPR=2163;RUN=1;SAF=2163;SAP=4699.91;SAR=0;SRF=534;SRP=1162.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:520:98,409:98:3767:409:15603:-1248.17,0,-186.164 0|1:438:133,302:133:5088:302:11473:-898.585,0,-326.665 0|1:233:51,180:51:1972:180:6916:-552.043,0,-107.942 0|1:416:76,337:76:2912:337:12968:-1039.89,0,-137.55 0|1:631:89,509:89:3376:509:19536:-1565.74,0,-123.567 0|1:531:87,426:87:3305:426:16326:-1313.46,0,-142.775 dDocent_Contig_6998 98 . N A 112.105 . AB=0;ABP=0;AC=6;AF=0.75;AN=8;AO=4;CIGAR=1X;DP=5;DPB=5;DPRA=1.33333;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=108;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:58:-5.50935,-0.60206,0 ./.:.:.:.:.:.:.:. 0/0:1:0,0:0:0:0:0:0,0,0 1/1:1:0,1:0:0:1:25:-2.49986,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:25:-2.49986,-0.30103,0 dDocent_Contig_6999 35 . G A 195298 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=5695;CIGAR=1X;DP=5920;DPB=5920;DPRA=0;EPP=12369.5;EPPR=487.249;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999824;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=226064;QR=8829;RO=223;RPL=0;RPP=12369.5;RPPR=487.249;RPR=5695;RUN=1;SAF=5695;SAP=12369.5;SAR=0;SRF=223;SRP=487.249;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:905:27,877:27:1065:877:34829:-3035.32,-176.4,0 1/1:997:37,960:37:1470:960:38176:-3299.77,-167.579,0 1/1:673:14,658:14:550:658:26108:-2297.61,-152.851,0 1/1:1145:24,1121:24:957:1121:44580:-3921.59,-258.248,0 1/1:1088:32,1056:32:1275:1056:41767:-3640.2,-212.505,0 1/1:1112:89,1023:89:3512:1023:40604:-3334.48,-18.6237,0 dDocent_Contig_7000 1 . N G 256.444 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=274;QR=0;RO=0;RPL=0;RPP=20.3821;RPPR=0;RPR=8;RUN=1;SAF=0;SAP=20.3821;SAR=8;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:7:0,7:0:0:7:239:-21.8436,-2.10721,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_7001 1 . N G 119.89 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=121;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:80:-7.59179,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_7002 17 . G A 46311.6 . AB=0.349693;ABP=482.799;AC=5;AF=0.416667;AN=12;AO=855;CIGAR=5M1X1M4I2M;DP=2445;DPB=2473.78;DPRA=0;EPP=1859.62;EPPR=997.545;GTI=0;LEN=1;MEANALT=4.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.995322;PAIREDR=0.997817;PAO=0;PQA=0;PQR=0;PRO=0;QA=33671;QR=18041;RO=458;RPL=0;RPP=1859.62;RPPR=997.545;RPR=855;RUN=1;SAF=855;SAP=1859.62;SAR=0;SRF=458;SRP=997.545;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:406:31,164,193:31:1205:164,193:6467,7373:-1028.56,-505.817,-555.457,-433.062,0,-473.971 1|0:374:65,104,200:65:2580:104,200:4100,7800:-746.434,-428.689,-609.775,-124.917,0,-277.103 1|0:242:45,112,78:45:1768:112,78:4393,2976:-446.392,-98.6778,-210.378,-215.842,0,-337.774 1|0:400:29,199,163:29:1141:199,163:7848,6124:-1044.69,-407.721,-441.672,-551.844,0,-596.629 0|0:559:182,162,213:182:7179:162,213:6359,8117:-610.939,-142.756,-684.666,0,-67.7073,-526.552 1|0:464:106,114,243:106:4168:114,243:4504,9372:-765.363,-426.651,-735.166,-27.79,0,-297.47 dDocent_Contig_7003 60 . C T 56.1669 . AB=0.0979381;ABP=275.407;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1X;DP=567;DPB=567;DPRA=1.60092;EPP=52.9542;EPPR=1184.29;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=899;QR=21372;RO=544;RPL=23;RPP=52.9542;RPPR=1184.29;RPR=0;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=544;SRP=1184.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:59,0:59:2312:0:0:0,-17.7608,-208.249 0/0:66:66,0:66:2629:0:0:0,-19.868,-236.742 0/1:53:47,6:47:1842:6:243:-6.29359,0,-150.047 0/0:93:93,0:93:3679:0:0:0,-27.9958,-331.133 0/0:155:151,4:151:5950:4:160:0,-31.8762,-520.527 0/1:141:128,13:128:4960:13:496:-2.5238,0,-403.844 dDocent_Contig_7004 10 . G C 7702.28 . AB=0.175693;ABP=2145.26;AC=3;AF=0.25;AN=12;AO=527;CIGAR=1X;DP=4198;DPB=4198;DPRA=0;EPP=1147.38;EPPR=7967.97;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998909;PAO=0;PQA=0;PQR=0;PRO=0;QA=21089;QR=144534;RO=3668;RPL=0;RPP=1147.38;RPPR=7967.97;RPR=527;RUN=1;SAF=527;SAP=1147.38;SAR=0;SRF=3668;SRP=7967.97;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:581:542,38:542:21377:38:1532:0,-36.8697,-1784.09 0/1:737:655,82:655:25686:82:3281:-73.4868,0,-2087.8 0/0:587:549,38:549:21612:38:1516:0,-40.029,-1806.68 0/0:685:646,39:646:25462:39:1573:0,-64.4013,-2147.71 0/1:844:654,189:654:26019:189:7562:-426.006,0,-2085.31 0/1:764:622,141:622:24378:141:5625:-275.958,0,-1961.96 dDocent_Contig_7005 14 . T C 212.31 . AB=0.189655;ABP=51.5315;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=508;DPB=508;DPRA=0.768392;EPP=37.7539;EPPR=1069.2;GTI=0;LEN=1;MEANALT=1.5;MQM=59;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=644;QR=19633;RO=491;RPL=0;RPP=37.7539;RPPR=1069.2;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=491;SRP=1069.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:56:56,0:56:2251:0:0:0,-16.8577,-202.75 0/1:58:47,11:47:1852:11:443:-22.7539,0,-149.424 0/0:42:42,0:42:1689:0:0:0,-12.6433,-152.231 0/0:83:77,5:77:3039:5:201:0,-6.62711,-255.124 0/0:143:143,0:143:5735:0:0:0,-43.0473,-515.941 0/0:126:126,0:126:5067:0:0:0,-37.9298,-455.89 dDocent_Contig_7006 49 . A G 574.003 . AB=0.209877;ABP=121.449;AC=3;AF=0.25;AN=12;AO=37;CIGAR=4M1X1M;DP=267;DPB=270.167;DPRA=0.807547;EPP=83.3548;EPPR=450.96;GTI=0;LEN=1;MEANALT=1.6;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=0.756757;PAIREDR=0.684685;PAO=0;PQA=0;PQR=0;PRO=0;QA=1333;QR=7675;RO=222;RPL=0;RPP=83.3548;RPPR=450.96;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=222;SRP=485.077;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:63:48,0,15:48:1654:0,15:0,524:-28.5189,-42.9683,-177.312,0,-134.692,-130.177 0|1:47:38,1,8:38:1309:1,8:33,302:-13.3533,-22.1295,-128.124,0,-103.669,-103.929 0|0:26:23,0,2:23:747:0,2:0,78:0,-6.92369,-67.1905,-0.41882,-60.7735,-60.1715 0|1:52:37,4,11:37:1282:4,11:124,391:-20.7497,-21.9485,-124.932,0,-94.2796,-100.916 0|0:53:51,0,0:51:1800:0,0:0,0:0,-15.3525,-162.004,-15.3525,-162.004,-162.004 0|0:26:25,0,1:25:883:0,1:0,38:0,-7.52575,-79.4078,-4.02951,-76.2903,-75.9892 dDocent_Contig_7007 98 . N T 305.444 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=12;CIGAR=1X;DP=12;DPB=12;DPRA=0;EPP=29.068;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=316;QR=0;RO=0;RPL=12;RPP=29.068;RPPR=0;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:2:0,2:0:0:2:26:-2.46997,-0.60206,0 1/1:2:0,2:0:0:2:54:-5.12867,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:141:-12.9693,-1.50515,0 1/1:2:0,2:0:0:2:60:-5.69857,-0.60206,0 dDocent_Contig_7008 10 . G T 273.521 . AB=0.118644;ABP=301.128;AC=1;AF=0.0833333;AN=12;AO=56;CIGAR=1X;DP=2176;DPB=2176;DPRA=0.913808;EPP=124.613;EPPR=4606.53;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995755;PAO=0;PQA=0;PQR=0;PRO=0;QA=2219;QR=84418;RO=2120;RPL=0;RPP=124.613;RPPR=4606.53;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=2120;SRP=4606.53;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:324:300,24:300:11970:24:952:0,-11.5534,-990.474 0/0:479:475,4:475:18894:4:160:0,-129.41,-1684.15 0/0:217:217,0:217:8615:0:0:0,-65.3235,-774.861 0/1:236:208,28:208:8350:28:1107:-28.875,0,-679.98 0/0:502:502,0:502:19899:0:0:0,-151.117,-1789.3 0/0:418:418,0:418:16690:0:0:0,-125.831,-1500.78 dDocent_Contig_7009 30 . T A 56.357 . AB=0.112676;ABP=95.5273;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=451;DPB=451;DPRA=1.09966;EPP=29.068;EPPR=956.287;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.979499;PAO=0;PQA=0;PQR=0;PRO=0;QA=475;QR=17525;RO=439;RPL=0;RPP=29.068;RPPR=956.287;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=439;SRP=956.287;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:52:52,0:52:2059:0:0:0,-15.6536,-185.498 0/0:74:74,0:74:2964:0:0:0,-22.2762,-266.851 0/0:80:80,0:80:3215:0:0:0,-24.0824,-289.404 0/0:85:85,0:85:3403:0:0:0,-25.5875,-306.311 0/1:71:63,8:63:2520:8:313:-7.15857,0,-205.561 0/0:89:85,4:85:3364:4:162:0,-11.8247,-287.846 dDocent_Contig_7010 179 . G A 93.9438 . AB=0.192308;ABP=24.391;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=101;DPB=101;DPRA=1.73333;EPP=13.8677;EPPR=211.472;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=204;QR=3855;RO=96;RPL=5;RPP=13.8677;RPPR=211.472;RPR=0;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=211.472;SRR=96;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:688:0:0:0,-5.11751,-62.2475 0/0:18:18,0:18:719:0:0:0,-5.41854,-65.0315 0/1:26:21,5:21:858:5:204:-10.9173,0,-69.7014 0/0:12:12,0:12:452:0:0:0,-3.61236,-41.0137 0/0:6:6,0:6:241:0:0:0,-1.80618,-22.0658 0/0:22:22,0:22:897:0:0:0,-6.62266,-81.0336 dDocent_Contig_7011 7 . A C 3515.26 . AB=0.0502513;ABP=702.268;AC=6;AF=0.5;AN=12;AO=20;CIGAR=1X3M;DP=464;DPB=464;DPRA=0;EPP=46.4397;EPPR=624.051;GTI=0;LEN=1;MEANALT=2.4;MQM=59.65;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.25;PAIREDR=0.541958;PAO=0;PQA=0;PQR=0;PRO=0;QA=771;QR=10807;RO=286;RPL=0;RPP=46.4397;RPPR=624.051;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=286;SRP=624.051;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:67:49,17,1:49:1846:17,1:658,39:-32.1455,0,-146.136,-43.6873,-148.048,-194.68 0|1:84:37,38,9:37:1398:38,9:1458,344:-93.7761,0,-103.145,-76.6926,-86.3695,-188.589 0|1:66:34,32,0:34:1294:32,0:1225,0:-86.0338,0,-96.8823,-96.2688,-106.515,-202.411 0|1:104:62,38,3:62:2325:38,3:1472,117:-90.5772,0,-179.046,-99.6204,-180.867,-289.169 0|1:88:71,12,5:71:2677:12,5:455,193:-14.3541,0,-215.755,-19.8705,-203.516,-237.752 0|1:55:33,19,2:33:1267:19,2:723,78:-45.8613,0,-98.2804,-49.381,-97.5879,-152.798 dDocent_Contig_7012 10 . G A 5772.84 . AB=0.19281;ABP=1257.07;AC=5;AF=0.416667;AN=12;AO=304;CIGAR=1X;DP=1845;DPB=1845;DPRA=0;EPP=663.138;EPPR=3349.25;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9474;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999351;PAO=0;PQA=0;PQR=0;PRO=0;QA=11990;QR=60878;RO=1541;RPL=0;RPP=663.138;RPPR=3349.25;RPR=304;RUN=1;SAF=304;SAP=663.138;SAR=0;SRF=1541;SRP=3349.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:286:234,52:234:9255:52:2019:-95.8199,0,-746.325 0/1:330:279,51:279:11021:51:2015:-82.2067,0,-891.859 0/1:317:240,77:240:9376:77:3050:-179.166,0,-747.884 0/1:342:280,62:280:11092:62:2458:-118.418,0,-894.499 0/1:255:202,53:202:8045:53:2083:-110.896,0,-646.869 0/0:315:306,9:306:12089:9:365:0,-61.61,-1053.98 dDocent_Contig_7013 98 . N C 370.346 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=12;CIGAR=1X;DP=12;DPB=12;DPRA=0;EPP=29.068;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=401;QR=0;RO=0;RPL=12;RPP=29.068;RPPR=0;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:95:-8.86391,-0.90309,0 1/1:9:0,9:0:0:9:306:-27.8694,-2.70927,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_7014 167 . C T 174.843 . AB=0.35;ABP=6.91895;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=466;DPB=466;DPRA=0.17757;EPP=20.3821;EPPR=997.545;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=309;QR=17676;RO=458;RPL=8;RPP=20.3821;RPPR=997.545;RPR=0;RUN=1;SAF=0;SAP=20.3821;SAR=8;SRF=0;SRP=997.545;SRR=458;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:36,0:36:1394:0:0:0,-10.8371,-125.712 0/0:18:17,1:17:645:1:35:0,-1.91991,-54.8689 0/1:20:13,7:13:500:7:274:-19.0071,0,-39.3178 0/0:17:17,0:17:657:0:0:0,-5.11751,-59.4525 0/0:233:233,0:233:9028:0:0:0,-70.14,-812.02 0/0:142:142,0:142:5452:0:0:0,-42.7463,-490.541 dDocent_Contig_7015 98 . N C 21883.3 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=711;CIGAR=2X;DP=712;DPB=714.5;DPRA=0;EPP=1546.93;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.973277;PAIREDR=0;PAO=5;PQA=129;PQR=0;PRO=0;QA=24307;QR=0;RO=0;RPL=711;RPP=1546.93;RPPR=0;RPR=0;RUN=1;SAF=711;SAP=1546.93;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:66:0,66:0:0:66:2230:-200.969,-19.868,0 1|1:163:0,163:0:0:163:5529:-497.43,-49.0679,0 1|1:105:0,105:0:0:105:3623:-326.044,-31.6082,0 1|1:66:0,66:0:0:66:2265:-203.891,-19.868,0 1|1:79:0,79:0:0:79:2703:-243.272,-23.7814,0 1|1:233:0,232:0:0:232:7957:-715.876,-69.839,0 dDocent_Contig_7016 98 . N A 322.744 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=12;CIGAR=1X;DP=12;DPB=12;DPRA=0;EPP=29.068;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=331;QR=0;RO=0;RPL=12;RPP=29.068;RPPR=0;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 1/1:2:0,2:0:0:2:49:-4.65369,-0.60206,0 1/1:2:0,2:0:0:2:44:-4.17977,-0.60206,0 1/1:3:0,3:0:0:3:80:-7.46543,-0.90309,0 1/1:3:0,3:0:0:3:90:-8.39828,-0.90309,0 dDocent_Contig_7017 27 . C T 286.788 . AB=0.245283;ABP=32.8783;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X3M1X;DP=239;DPB=239;DPRA=1.39;EPP=37.7539;EPPR=485.077;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.4375;PAIREDR=0.621622;PAO=0;PQA=0;PQR=0;PRO=0;QA=623;QR=8772;RO=222;RPL=0;RPP=37.7539;RPPR=485.077;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=222;SRP=485.077;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:41:41,0:41:1628:0:0:0,-12.3422,-146.763 0|0:47:45,1:45:1762:1:38:0,-10.4348,-155.004 0|0:14:14,0:14:559:0:0:0,-4.21442,-50.6538 0|0:45:45,0:45:1765:0:0:0,-13.5463,-159.08 0|0:39:37,2:37:1473:2:76:0,-4.52536,-125.61 0|1:53:40,13:40:1585:13:509:-30.2016,0,-126.943 dDocent_Contig_7018 43 . T C 275.729 . AB=0.272727;ABP=22.751;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=147;DPB=147;DPRA=0.96;EPP=33.4109;EPPR=291.816;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.642857;PAIREDR=0.827068;PAO=0;PQA=0;PQR=0;PRO=0;QA=562;QR=5325;RO=133;RPL=0;RPP=33.4109;RPPR=291.816;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=133;SRP=291.816;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:26,2:26:1017:2:81:0,-0.743106,-84.1325 0/1:25:21,4:21:849:4:160:-7.25717,0,-69.1963 0/0:22:22,0:22:895:0:0:0,-6.62266,-80.8555 0/1:19:11,8:11:416:8:321:-23.5374,0,-32.0596 0/0:25:25,0:25:1010:0:0:0,-7.52575,-91.195 0/0:28:28,0:28:1138:0:0:0,-8.42884,-102.699 dDocent_Contig_7019 13 . C A 388.502 . AB=0.135135;ABP=302.497;AC=1;AF=0.0833333;AN=12;AO=61;CIGAR=1X;DP=1100;DPB=1100;DPRA=1.91777;EPP=135.47;EPPR=2259.17;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2300;QR=41193;RO=1039;RPL=0;RPP=135.47;RPPR=2259.17;RPR=61;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=1039;SRP=2259.17;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:123:123,0:123:4912:0:0:0,-37.0267,-441.976 0/0:153:152,1:152:6041:1:41:0,-41.963,-539.386 0/0:126:126,0:126:4946:0:0:0,-37.9298,-445.041 0/0:128:128,0:128:5112:0:0:0,-38.5318,-459.942 0/1:259:224,35:224:8935:35:1312:-40.373,0,-725.674 0/0:311:286,25:286:11247:25:947:0,-8.09622,-925.986 dDocent_Contig_7020 76 . G T 658.684 . AB=0.648649;ABP=10.1116;AC=1;AF=0.0833333;AN=12;AO=24;CIGAR=1X;DP=125;DPB=125;DPRA=2.10227;EPP=55.1256;EPPR=222.329;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.861386;PAO=0;PQA=0;PQR=0;PRO=0;QA=869;QR=3663;RO=101;RPL=24;RPP=55.1256;RPPR=222.329;RPR=0;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=101;SRP=222.329;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:11:11,0:11:399:0:0:0,-3.31133,-36.2537 0/0:12:12,0:12:441:0:0:0,-3.61236,-40.035 0/0:12:12,0:12:442:0:0:0,-3.61236,-40.1247 0/0:23:23,0:23:840:0:0:0,-6.92369,-75.9231 0/1:37:13,24:13:471:24:869:-67.3913,0,-31.5913 0/0:30:30,0:30:1070:0:0:0,-9.0309,-96.6065 dDocent_Contig_7021 70 . T C 339.053 . AB=0.142045;ABP=198.887;AC=1;AF=0.0833333;AN=12;AO=29;CIGAR=1X;DP=845;DPB=845;DPRA=1.47076;EPP=65.983;EPPR=1774.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1108;QR=31588;RO=816;RPL=29;RPP=65.983;RPPR=1774.93;RPR=0;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=816;SRP=1774.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:115:114,1:114:4341:1:7:0,-33.9184,-390.059 0/0:148:148,0:148:5631:0:0:0,-44.5524,-506.769 0/0:93:93,0:93:3582:0:0:0,-27.9958,-322.416 0/1:176:151,25:151:5959:25:979:-35.4282,0,-483.13 0/0:101:101,0:101:3815:0:0:0,-30.404,-343.471 0/0:212:209,3:209:8260:3:122:0,-52.4459,-731.606 dDocent_Contig_7022 7 . A G 18283.7 . AB=0.444861;ABP=52.3404;AC=6;AF=0.5;AN=12;AO=831;CIGAR=1X;DP=1868;DPB=1868;DPRA=0;EPP=1807.5;EPPR=2194.03;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=26595;QR=38463;RO=1009;RPL=0;RPP=1807.5;RPPR=2194.03;RPR=831;RUN=1;SAF=831;SAP=1807.5;SAR=0;SRF=1009;SRP=2194.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:265:125,140:125:4762:140:4432:-319.213,0,-348.853 0/1:213:97,112:97:3683:112:3466:-249.05,0,-268.537 0/1:206:92,109:92:3539:109:3757:-277.588,0,-257.946 0/1:340:228,109:228:8552:109:3449:-208.962,0,-667.85 0/1:438:211,218:211:8116:218:6871:-489.127,0,-600.957 0/1:406:256,143:256:9811:143:4620:-295.65,0,-762.428 dDocent_Contig_7023 51 . T G 512.011 . AB=0.23301;ABP=66.7841;AC=1;AF=0.0833333;AN=12;AO=24;CIGAR=1X;DP=433;DPB=433;DPRA=1.56061;EPP=55.1256;EPPR=891.143;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.98044;PAO=0;PQA=0;PQR=0;PRO=0;QA=927;QR=16335;RO=409;RPL=24;RPP=55.1256;RPPR=891.143;RPR=0;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=409;SRP=891.143;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:59,0:59:2334:0:0:0,-17.7608,-210.227 0/0:82:82,0:82:3249:0:0:0,-24.6845,-292.471 0/0:53:53,0:53:2119:0:0:0,-15.9546,-190.891 0/0:67:67,0:67:2708:0:0:0,-20.169,-243.829 0/0:69:69,0:69:2761:0:0:0,-20.7711,-248.605 0/1:103:79,24:79:3164:24:927:-52.724,0,-253.822 dDocent_Contig_7024 45 . C T 6285.73 . AB=0.41989;ABP=33.2789;AC=6;AF=0.5;AN=12;AO=228;CIGAR=1X2M;DP=543;DPB=543;DPRA=0;EPP=498.106;EPPR=673.995;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=0.960526;PAIREDR=0.983819;PAO=0;PQA=0;PQR=0;PRO=0;QA=8901;QR=12280;RO=309;RPL=0;RPP=498.106;RPPR=673.995;RPR=228;RUN=1;SAF=228;SAP=498.106;SAR=0;SRF=309;SRP=673.995;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:64:28,4,32:28:1106:4,32:160,1270:-96.1133,-91.3615,-181.164,0,-77.8221,-81.3701 0|1:107:54,1,52:54:2154:1,52:34,2041:-151.641,-165.139,-342.23,0,-174.689,-161.792 0|1:63:41,0,22:41:1650:0,22:0,851:-57.9325,-70.2747,-206.271,0,-136.388,-129.766 0|1:93:48,0,45:48:1908:0,45:0,1696:-124.881,-139.33,-296.425,0,-157.481,-143.935 0|1:88:55,0,33:55:2179:0,33:0,1297:-90.5067,-107.063,-286.409,0,-179.739,-169.805 0|1:128:83,0,44:83:3283:0,44:0,1746:-118.721,-143.706,-413.873,0,-270.154,-256.908 dDocent_Contig_7025 17 . G T 579.848 . AB=0.108418;ABP=1047.19;AC=1;AF=0.0833333;AN=12;AO=212;CIGAR=1X;DP=4337;DPB=4337;DPRA=0.902652;EPP=463.362;EPPR=8958.16;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8165;QR=163976;RO=4124;RPL=0;RPP=463.362;RPPR=8958.16;RPR=212;RUN=1;SAF=212;SAP=463.362;SAR=0;SRF=4124;SRP=8958.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:714:654,60:654:25947:60:2326:0,-5.39279,-2123.44 0/1:784:699,85:699:27826:85:3282:-59.5077,0,-2265.87 0/0:563:546,16:546:21822:16:608:0,-114.524,-1907.02 0/0:730:679,51:679:26926:51:1949:0,-44.1062,-2245.32 0/0:819:819,0:819:32560:0:0:0,-246.544,-2927.45 0/0:727:727,0:727:28895:0:0:0,-218.849,-2597.99 dDocent_Contig_7026 70 . C T 8140.55 . AB=0.602484;ABP=47.0737;AC=1;AF=0.0833333;AN=12;AO=307;CIGAR=1X;DP=2024;DPB=2024;DPRA=1.03676;EPP=669.652;EPPR=3731.43;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11284;QR=64609;RO=1717;RPL=307;RPP=669.652;RPPR=3731.43;RPR=0;RUN=1;SAF=307;SAP=669.652;SAR=0;SRF=1717;SRP=3731.43;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:253:253,0:253:9542:0:0:0,-76.1606,-858.493 0/0:314:314,0:314:11837:0:0:0,-94.5234,-1064.88 0/0:326:326,0:326:12362:0:0:0,-98.1358,-1112.09 0/0:440:440,0:440:16432:0:0:0,-132.453,-1478.1 0/1:483:192,291:192:7222:291:10681:-815.578,0,-504.448 0/0:208:192,16:192:7214:16:603:0,-8.00734,-594.536 dDocent_Contig_7027 7 . A C 4889.92 . AB=0.283174;ABP=301.518;AC=3;AF=0.25;AN=12;AO=214;CIGAR=1X;DP=1407;DPB=1407;DPRA=0.699042;EPP=467.705;EPPR=2593.58;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997485;PAO=0;PQA=0;PQR=0;PRO=0;QA=8202;QR=45460;RO=1193;RPL=0;RPP=467.705;RPPR=2593.58;RPR=214;RUN=1;SAF=214;SAP=467.705;SAR=0;SRF=1193;SRP=2593.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:253:199,54:199:7562:54:2068:-110.192,0,-604.27 0/1:270:158,112:158:6016:112:4292:-305.066,0,-460.111 0/0:166:163,3:163:6204:3:117:0,-39.0606,-547.397 0/1:208:167,41:167:6364:41:1570:-78.9549,0,-510.065 0/0:197:193,4:193:7370:4:155:0,-44.9775,-648.824 0/0:313:313,0:313:11944:0:0:0,-94.2224,-1074.5 dDocent_Contig_7028 33 . A T 801.487 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=61;CIGAR=1X1M1X;DP=61;DPB=61;DPRA=0;EPP=135.47;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=14.6721;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0163934;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2052;QR=0;RO=0;RPL=0;RPP=135.47;RPPR=0;RPR=61;RUN=1;SAF=0;SAP=135.47;SAR=61;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:4:0,4:0:0:4:135:-5.5287,-1.20412,0 1|1:16:0,16:0:0:16:544:-22.4029,-4.81648,0 1|1:7:0,7:0:0:7:236:-9.56112,-2.10721,0 1|1:6:0,6:0:0:6:195:-6.56704,-1.80618,0 1|1:13:0,13:0:0:13:432:-17.6174,-3.91339,0 1|1:15:0,15:0:0:15:510:-17.6263,-4.51545,0 dDocent_Contig_7029 10 . G A 48334.5 . AB=0.0371195;ABP=2509.81;AC=0;AF=0;AN=12;AO=50;CIGAR=1X3M;DP=3296;DPB=3296;DPRA=0;EPP=111.584;EPPR=3314.51;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=2.22045e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1983;QR=60062;RO=1525;RPL=0;RPP=111.584;RPPR=3314.51;RPR=50;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=1525;SRP=3314.51;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:433:156,26,0,250:156:6108:26,0,250:1033,0,9916:-769.226,-731.142,-1225.52,-816.187,-1233.34,-1318.39,0,-417.162,-502.208,-426.95 0|0:520:173,27,0,315:173:6835:27,0,315:1079,0,12534:-979.859,-943.063,-1497.37,-1031.94,-1505.49,-1594.37,0,-473.559,-562.434,-467.61 0|0:435:218,19,0,190:218:8574:19,0,190:766,0,7569:-557.593,-560.078,-1259.6,-623.217,-1265.32,-1328.46,0,-642.102,-705.241,-648.046 0|0:561:223,9,0,325:223:8793:9,0,325:358,0,12940:-998.376,-1036.03,-1756.74,-1065.51,-1759.45,-1788.93,0,-694.005,-723.481,-625.646 0|0:658:401,0,15,241:401:15833:0,15,241:0,583,9604:-670.1,-790.813,-2093.58,-742.913,-2045.68,-2041.17,0,-1302.78,-1254.88,-1230.23 0|0:689:354,1,35,299:354:13919:1,35,299:35,1400,11859:-869.518,-973.235,-2117.79,-860.76,-2002.77,-1995.08,0,-1142.01,-1029.53,-1054.85 dDocent_Contig_7030 98 . N T 95.1443 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=97;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:41:-3.89396,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:56:-5.31832,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_7031 107 . N A 1285.78 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=42;CIGAR=1X;DP=42;DPB=42;DPRA=0;EPP=94.2121;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1403;QR=0;RO=0;RPL=0;RPP=94.2121;RPPR=0;RPR=42;RUN=1;SAF=0;SAP=94.2121;SAR=42;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:7:0,7:0:0:7:237:-21.6616,-2.10721,0 1/1:22:0,22:0:0:22:744:-67.2761,-6.62266,0 ./.:.:.:.:.:.:.:. 1/1:10:0,10:0:0:10:322:-29.2934,-3.0103,0 1/1:1:0,1:0:0:1:30:-2.99957,-0.30103,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 dDocent_Contig_7032 188 . A C 4498.07 . AB=0.305743;ABP=197.049;AC=6;AF=0.5;AN=12;AO=181;CIGAR=1X;DP=592;DPB=592;DPRA=0;EPP=396.047;EPPR=893.314;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.933702;PAIREDR=0.965854;PAO=0;PQA=0;PQR=0;PRO=0;QA=7069;QR=16292;RO=410;RPL=181;RPP=396.047;RPPR=893.314;RPR=0;RUN=1;SAF=0;SAP=396.047;SAR=181;SRF=0;SRP=893.314;SRR=410;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:91:77,14:77:3053:14:532:-20.8172,0,-247.441 0/1:105:57,48:57:2275:48:1835:-133.759,0,-173.31 0/1:97:46,51:46:1781:51:2003:-151.275,0,-131.302 0/1:101:60,41:60:2409:41:1612:-114.91,0,-186.554 0/1:72:66,6:66:2626:6:246:-0.84596,0,-214.794 0/1:126:104,21:104:4148:21:841:-38.2627,0,-335.555 dDocent_Contig_7033 98 . N G 249.518 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=12;CIGAR=1X;DP=12;DPB=12;DPRA=0;EPP=29.068;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=255;QR=0;RO=0;RPL=12;RPP=29.068;RPPR=0;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:3:0,3:0:0:3:64:-5.97272,-0.90309,0 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 1/1:3:0,3:0:0:3:101:-9.42377,-0.90309,0 1/1:2:0,2:0:0:2:34:-3.22979,-0.60206,0 1/1:2:0,2:0:0:2:14:-1.33,-0.60206,0 dDocent_Contig_7034 9 . A C 35.2044 . AB=0;ABP=0;AC=2;AF=0.5;AN=4;AO=5;CIGAR=1X;DP=9;DPB=9;DPRA=1.25;EPP=13.8677;EPPR=11.6962;GTI=0;LEN=1;MEANALT=1;MQM=7;MQMR=10;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=195;QR=156;RO=4;RPL=0;RPP=13.8677;RPPR=11.6962;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=4;SRP=11.6962;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:5:0,5:0:0:5:195:-3.21899,-1.50515,0 0/0:4:4,0:4:156:0:0:0,-1.20412,-3.69768 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_7035 16 . G A 849.862 . AB=0.20098;ABP=161.443;AC=1;AF=0.0833333;AN=12;AO=41;CIGAR=1X;DP=2120;DPB=2120;DPRA=0.532359;EPP=92.0407;EPPR=4515.33;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9966;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999519;PAO=0;PQA=0;PQR=0;PRO=0;QA=1641;QR=83126;RO=2078;RPL=0;RPP=92.0407;RPPR=4515.33;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=2078;SRP=4515.33;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:332:332,0:332:13333:0:0:0,-99.942,-1198.93 0/0:633:632,0:632:25206:0:0:0,-190.251,-2265.96 0/0:291:291,0:291:11649:0:0:0,-87.5997,-1047.56 0/0:435:435,0:435:17424:0:0:0,-130.948,-1566.69 0/0:225:225,0:225:8942:0:0:0,-67.7317,-804.216 0/1:204:163,41:163:6572:41:1641:-86.5091,0,-529.763 dDocent_Contig_7036 11 . A T 438.698 . AB=0.121593;ABP=596.278;AC=3;AF=0.25;AN=12;AO=86;CIGAR=1X;DP=1167;DPB=1167;DPRA=0.814783;EPP=189.757;EPPR=2350.37;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.476744;PAIREDR=0.961147;PAO=0;PQA=0;PQR=0;PRO=0;QA=3155;QR=43287;RO=1081;RPL=0;RPP=189.757;RPPR=2350.37;RPR=86;RUN=1;SAF=86;SAP=189.757;SAR=0;SRF=1081;SRP=2350.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:155:131,24:131:5222:24:888:-33.5807,0,-423.181 0/0:343:317,26:317:12730:26:949:0,-17.5281,-1059.03 0/1:157:141,16:141:5643:16:584:-5.63102,0,-460.418 0/1:165:147,18:147:5896:18:658:-9.87985,0,-480.748 0/0:117:115,2:115:4607:2:76:0,-28.0058,-407.332 0/0:230:230,0:230:9189:0:0:0,-69.2369,-826.461 dDocent_Contig_7037 11 . T C 281.251 . AB=0.171717;ABP=95.6817;AC=3;AF=0.25;AN=12;AO=17;CIGAR=1X;DP=198;DPB=198;DPRA=1;EPP=39.9253;EPPR=396.047;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.411765;PAIREDR=0.585635;PAO=0;PQA=0;PQR=0;PRO=0;QA=689;QR=7255;RO=181;RPL=0;RPP=39.9253;RPPR=396.047;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=181;SRP=396.047;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:27,5:27:1092:5:205:-9.20205,0,-88.9326 0/1:40:34,6:34:1355:6:243:-10.2064,0,-110.165 0/1:27:21,6:21:845:6:241:-13.9385,0,-68.234 0/0:29:29,0:29:1171:0:0:0,-8.72987,-105.663 0/0:31:31,0:31:1225:0:0:0,-9.33193,-110.524 0/0:39:39,0:39:1567:0:0:0,-11.7402,-141.258 dDocent_Contig_7038 59 . A G 3348.31 . AB=0.224784;ABP=459.595;AC=4;AF=0.333333;AN=12;AO=173;CIGAR=1X;DP=990;DPB=990;DPRA=0;EPP=378.675;EPPR=1777.1;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6784;QR=32065;RO=817;RPL=173;RPP=378.675;RPPR=1777.1;RPR=0;RUN=1;SAF=173;SAP=378.675;SAR=0;SRF=817;SRP=1777.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:145:124,21:124:4878:21:849:-33.0728,0,-395.279 0/1:169:113,56:113:4423:56:2179:-145.417,0,-347.167 0/1:233:186,47:186:7320:47:1836:-95.3171,0,-588.336 0/1:147:115,32:115:4555:32:1247:-68.2457,0,-365.638 0/0:155:148,7:148:5740:7:278:0,-21.2698,-491.073 0/0:141:131,10:131:5149:10:395:0,-6.54006,-427.4 dDocent_Contig_7039 14 . A G 1940.47 . AB=0.273038;ABP=134.106;AC=2;AF=0.166667;AN=12;AO=94;CIGAR=1X;DP=857;DPB=857;DPRA=1.70444;EPP=207.129;EPPR=1659.84;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.989362;PAIREDR=0.971166;PAO=0;PQA=0;PQR=0;PRO=0;QA=3734;QR=30374;RO=763;RPL=0;RPP=207.129;RPPR=1659.84;RPR=94;RUN=1;SAF=94;SAP=207.129;SAR=0;SRF=763;SRP=1659.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:124:121,3:121:4856:3:123:0,-25.8629,-425.462 0/0:206:203,3:203:8068:3:122:0,-50.6397,-714.321 0/0:90:90,0:90:3597:0:0:0,-27.0927,-323.755 0/0:144:136,8:136:5401:8:322:0,-13.9998,-456.597 0/1:128:95,33:95:3782:33:1310:-79.6197,0,-301.863 0/1:165:118,47:118:4670:47:1857:-117.65,0,-370.552 dDocent_Contig_7040 128 . T G 75.8581 . AB=0.162162;ABP=39.6906;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=318;DPB=318;DPRA=0.890909;EPP=18.2106;EPPR=678.338;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.881029;PAO=0;PQA=0;PQR=0;PRO=0;QA=258;QR=11292;RO=311;RPL=0;RPP=18.2106;RPPR=678.338;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=678.338;SRR=311;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:64:64,0:64:2319:0:0:0,-19.2659,-208.943 0/0:61:60,1:60:2192:1:37:0,-14.665,-193.833 0/1:37:31,6:31:1131:6:221:-9.10869,0,-90.9605 0/0:63:63,0:63:2291:0:0:0,-18.9649,-206.441 0/0:35:35,0:35:1255:0:0:0,-10.536,-113.248 0/0:58:58,0:58:2104:0:0:0,-17.4597,-189.621 dDocent_Contig_7041 98 . N C 3454.45 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=113;CIGAR=2X;DP=113;DPB=119.5;DPRA=0;EPP=248.387;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=4;PQA=104;PQR=0;PRO=0;QA=3835;QR=0;RO=0;RPL=113;RPP=248.387;RPPR=0;RPR=0;RUN=1;SAF=113;SAP=248.387;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:19:0,19:0:0:19:651:-58.6549,-5.71957,0 1|1:94:0,94:0:0:94:3184:-286.489,-28.2968,0 dDocent_Contig_7042 19 . A C 24804.8 . AB=0.0380623;ABP=1074.31;AC=0;AF=0;AN=12;AO=22;CIGAR=1X2M1X;DP=2363;DPB=2363;DPRA=0;EPP=50.7827;EPPR=3071.3;GTI=0;LEN=1;MEANALT=4.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.995754;PAO=0;PQA=0;PQR=0;PRO=0;QA=856;QR=55520;RO=1413;RPL=0;RPP=50.7827;RPPR=3071.3;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=1413;SRP=3071.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:370:131,0,235:131:5100:0,235:0,9115:-709.376,-748.811,-1167.91,0,-419.166,-348.424 0|0:404:254,0,143:254:9968:0,143:0,5581:-382.245,-458.707,-1278.44,0,-819.725,-776.678 0|0:299:96,8,190:96:3772:8,190:312,7448:-583.495,-586.751,-894.574,0,-284.586,-253.033 0|0:279:124,14,139:124:4873:14,139:544,5471:-412.693,-405.322,-801.894,0,-356.092,-358.947 0|0:323:274,0,48:274:10793:0,48:0,1857:-70.0114,-152.494,-1040.38,0,-887.865,-873.415 0|0:688:534,0,154:534:21014:0,154:0,6013:-333.88,-494.63,-2223.17,0,-1728.93,-1682.57 dDocent_Contig_7043 78 . C T 486.741 . AB=0.149635;ABP=295.161;AC=2;AF=0.166667;AN=12;AO=89;CIGAR=1X;DP=1092;DPB=1092;DPRA=0;EPP=187.683;EPPR=2002.41;GTI=0;LEN=1;MEANALT=1;MQM=59.6292;MQMR=59.3948;NS=6;NUMALT=1;ODDS=0;PAIRED=0.573034;PAIREDR=0.373878;PAO=0;PQA=0;PQR=0;PRO=0;QA=3229;QR=36506;RO=1003;RPL=88;RPP=187.683;RPPR=2078.01;RPR=1;RUN=1;SAF=89;SAP=196.271;SAR=0;SRF=994;SRP=2103.53;SRR=9;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:289:276,13:276:9950:13:479:0,-43.544,-850.322 0/0:247:229,18:229:8323:18:649:0,-15.6142,-687.843 0/1:162:143,19:143:5257:19:683:-13.0165,0,-424.449 0/0:173:162,11:162:5938:11:402:0,-16.7514,-484.296 0/0:109:103,6:103:3743:6:213:0,-13.2971,-317.533 0/1:112:90,22:90:3295:22:803:-38.8795,0,-262.527 dDocent_Contig_7044 27 . C A 45340.7 . AB=0.0721649;ABP=1853.64;AC=0;AF=0;AN=12;AO=84;CIGAR=1X1M1X;DP=2291;DPB=2291;DPRA=0;EPP=185.414;EPPR=1635.96;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3249;QR=29783;RO=752;RPL=0;RPP=185.414;RPPR=1635.96;RPR=84;RUN=1;SAF=84;SAP=185.414;SAR=0;SRF=752;SRP=1635.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:239:142,0,97:142:5589:0,97:0,3906:-279.581,-322.327,-782.046,0,-460.118,-430.918 0|0:343:122,19,202:122:4846:19,202:729,8026:-623.976,-600.882,-994.099,0,-339.13,-338.141 0|0:362:133,37,189:133:5241:37,189:1440,7512:-578.37,-500.078,-920.095,0,-312.833,-374.268 0|0:459:164,28,267:164:6529:28,267:1080,10644:-827.125,-787.818,-1316.98,0,-448.928,-457.228 0|0:368:54,0,313:54:2139:0,313:0,12468:-1010.33,-1026.58,-1202.63,0,-176.03,-81.8072 0|0:520:137,0,383:137:5439:0,383:0,15374:-1225.91,-1267.15,-1714.87,0,-448.119,-332.825 dDocent_Contig_7045 45 . G A 70736.8 . AB=0.750835;ABP=1639.23;AC=6;AF=0.5;AN=12;AO=2248;CIGAR=1X;DP=2994;DPB=2994;DPRA=0;EPP=4867.12;EPPR=1614.25;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99866;PAO=0;PQA=0;PQR=0;PRO=0;QA=88806;QR=29441;RO=746;RPL=2;RPP=4867.12;RPPR=1614.25;RPR=2246;RUN=1;SAF=2248;SAP=4884.48;SAR=0;SRF=746;SRP=1622.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:480:45,435:45:1780:435:17145:-1397.28,0,-15.9313 0/1:540:139,401:139:5420:401:15802:-1258.47,0,-325.103 0/1:431:53,378:53:2129:378:14954:-1215.03,0,-62.0452 0/1:563:173,390:173:6829:390:15390:-1214.52,0,-444.857 0/1:530:185,345:185:7326:345:13658:-1068.73,0,-499.447 0/1:450:151,299:151:5957:299:11857:-930.878,0,-400.464 dDocent_Contig_7046 47 . T C 2735.57 . AB=0.321101;ABP=93.9133;AC=2;AF=0.166667;AN=12;AO=106;CIGAR=1X;DP=1247;DPB=1247;DPRA=0.988836;EPP=233.186;EPPR=1969.25;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.990566;PAIREDR=0.996491;PAO=0;PQA=0;PQR=0;PRO=0;QA=4206;QR=45605;RO=1140;RPL=106;RPP=233.186;RPPR=1969.25;RPR=0;RUN=1;SAF=106;SAP=233.186;SAR=0;SRF=1140;SRP=2478.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:276:276,0:276:11018:0:0:0,-83.0843,-990.857 0/0:223:222,0:222:8892:0:0:0,-66.8287,-799.416 0/0:128:128,0:128:5137:0:0:0,-38.5318,-462.183 0/0:293:292,1:292:11702:1:41:0,-84.1072,-1048.24 0/1:135:88,47:88:3495:47:1857:-126.699,0,-273.941 0/1:192:134,58:134:5361:58:2308:-150.08,0,-424.521 dDocent_Contig_7047 55 . G C 697.148 . AB=0.181818;ABP=196.469;AC=5;AF=0.416667;AN=12;AO=40;CIGAR=2X;DP=267;DPB=267;DPRA=0.93617;EPP=89.8692;EPPR=491.592;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.525;PAIREDR=0.48;PAO=0;PQA=0;PQR=0;PRO=0;QA=1591;QR=8688;RO=225;RPL=40;RPP=89.8692;RPPR=491.592;RPR=0;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=225;SRP=491.592;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:44:32,12:32:1226:12:472:-29.5804,0,-97.3621 0|1:48:38,9:38:1490:9:357:-18.1836,0,-120.068 0|1:37:32,5:32:1255:5:202:-7.42397,0,-102.084 0|1:32:26,6:26:1025:6:240:-12.3427,0,-82.916 0|0:47:46,0:46:1759:0:0:0,-13.8474,-158.397 0|1:59:51,8:51:1933:8:320:-11.406,0,-156.416 dDocent_Contig_7048 9 . A G 468.549 . AB=0.159794;ABP=198.04;AC=2;AF=0.166667;AN=12;AO=52;CIGAR=1X2M1X;DP=722;DPB=722;DPRA=0.775676;EPP=115.927;EPPR=1449.21;GTI=0;LEN=1;MEANALT=1.8;MQM=55.1346;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2021;QR=25955;RO=666;RPL=0;RPP=115.927;RPPR=1449.21;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=666;SRP=1449.21;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:89:84,4:84:3248:4:159:0,-12.2374,-277.787 0|1:76:55,20:55:2134:20:770:-46.5224,0,-169.287 0|1:118:106,11:106:4110:11:432:-3.55225,0,-334.35 0|0:121:112,8:112:4388:8:317:0,-7.69778,-366.101 0|0:148:148,0:148:5785:0:0:0,-44.5524,-520.549 0|0:170:161,9:161:6290:9:343:0,-20.0081,-534.789 dDocent_Contig_7049 35 . C T 862.448 . AB=0.138298;ABP=537.1;AC=3;AF=0.25;AN=12;AO=92;CIGAR=1X;DP=1107;DPB=1107;DPRA=1.66211;EPP=202.786;EPPR=2207.05;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.98913;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3641;QR=40409;RO=1015;RPL=0;RPP=202.786;RPPR=2207.05;RPR=92;RUN=1;SAF=92;SAP=202.786;SAR=0;SRF=1015;SRP=2207.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:225:225,0:225:8994:0:0:0,-67.7317,-808.928 0/0:381:354,27:354:14099:27:1063:0,-18.7309,-1171.88 0/1:168:152,16:152:6064:16:641:-7.44895,0,-494.967 0/1:250:209,41:209:8303:41:1625:-71.2305,0,-671.557 0/0:31:31,0:31:1221:0:0:0,-9.33193,-110.157 0/1:52:44,8:44:1728:8:312:-12.7873,0,-140.08 dDocent_Contig_7050 35 . A C 158.213 . AB=0.195652;ABP=40.0197;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=139;DPB=139;DPRA=0.989247;EPP=22.5536;EPPR=285.302;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.888889;PAIREDR=0.823077;PAO=0;PQA=0;PQR=0;PRO=0;QA=357;QR=4998;RO=130;RPL=0;RPP=22.5536;RPPR=285.302;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=130;SRP=285.302;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:16,6:16:618:6:238:-15.1715,0,-49.3318 0/0:19:19,0:19:730:0:0:0,-5.71957,-66.0266 0/1:24:21,3:21:798:3:119:-3.87067,0,-64.9152 0/0:16:16,0:16:632:0:0:0,-4.81648,-57.2179 0/0:27:27,0:27:1044:0:0:0,-8.12781,-94.264 0/0:31:31,0:31:1176:0:0:0,-9.33193,-106.125 dDocent_Contig_7051 8 . A G 5179.88 . AB=0.261981;ABP=465.076;AC=5;AF=0.416667;AN=12;AO=255;CIGAR=2X;DP=1135;DPB=1135;DPRA=0;EPP=556.736;EPPR=1909.56;GTI=0;LEN=1;MEANALT=1.33333;MQM=43.8784;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.995444;PAO=0;PQA=0;PQR=0;PRO=0;QA=9618;QR=33445;RO=878;RPL=0;RPP=556.736;RPPR=1909.56;RPR=255;RUN=1;SAF=255;SAP=556.736;SAR=0;SRF=878;SRP=1909.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:161:121,39:121:4590:39:1487:-79.4994,0,-364.655 0|1:199:177,21:177:6771:21:781:-9.20312,0,-549.298 0|1:172:92,80:92:3499:80:3037:-210.429,0,-263.273 0|1:222:136,86:136:5184:86:3232:-217.676,0,-399.747 0|0:196:187,9:187:7123:9:329:0,-32.3229,-614.277 0|1:185:165,20:165:6278:20:752:-10.4027,0,-509.276 dDocent_Contig_7052 10 . C T 3368.78 . AB=0.182927;ABP=862.278;AC=4;AF=0.333333;AN=12;AO=197;CIGAR=1X;DP=1585;DPB=1585;DPRA=0.896886;EPP=430.79;EPPR=3017.01;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7772;QR=55780;RO=1388;RPL=0;RPP=430.79;RPPR=3017.01;RPR=197;RUN=1;SAF=197;SAP=430.79;SAR=0;SRF=1388;SRP=3017.01;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:219:180,39:180:7224:39:1518:-70.9403,0,-583.856 0/1:348:279,69:279:11174:69:2740:-141.957,0,-900.112 0/1:165:130,35:130:5206:35:1388:-75.5026,0,-418.713 0/1:252:215,37:215:8714:37:1459:-55.7,0,-707.831 0/0:289:289,0:289:11629:0:0:0,-86.9977,-1045.76 0/0:312:295,17:295:11833:17:667:0,-33.5643,-1003.74 dDocent_Contig_7053 38 . C T 878.424 . AB=0.14082;ABP=631.65;AC=2;AF=0.166667;AN=12;AO=89;CIGAR=1X;DP=1656;DPB=1656;DPRA=1.26849;EPP=196.271;EPPR=3405.71;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.2355;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.980855;PAO=0;PQA=0;PQR=0;PRO=0;QA=3215;QR=61993;RO=1567;RPL=0;RPP=196.271;RPPR=3405.71;RPR=89;RUN=1;SAF=89;SAP=196.271;SAR=0;SRF=1567;SRP=3405.71;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:326:282,44:282:11141:44:1612:-47.2152,0,-901.856 0/0:314:314,0:314:12386:0:0:0,-94.5234,-1102.46 0/1:235:200,35:200:7900:35:1270:-43.849,0,-632.954 0/0:365:355,10:355:14153:10:333:0,-79.588,-1224.4 0/0:207:207,0:207:8135:0:0:0,-62.3132,-722.708 0/0:209:209,0:209:8278:0:0:0,-62.9153,-738.835 dDocent_Contig_7054 107 . N G 128.155 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=125;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:57:-5.41422,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_7055 10 . C A 4745.23 . AB=0.235619;ABP=551.845;AC=4;AF=0.333333;AN=12;AO=236;CIGAR=1X;DP=1356;DPB=1356;DPRA=0;EPP=515.478;EPPR=2435.06;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999107;PAO=0;PQA=0;PQR=0;PRO=0;QA=9278;QR=44830;RO=1120;RPL=0;RPP=515.478;RPPR=2435.06;RPR=236;RUN=1;SAF=236;SAP=515.478;SAR=0;SRF=1120;SRP=2435.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:274:263,11:263:10523:11:426:0,-43.7922,-907.675 0/0:178:166,12:166:6648:12:484:0,-9.67114,-554.113 0/1:172:135,37:135:5374:37:1452:-79.1511,0,-431.728 0/1:328:213,115:213:8523:115:4538:-309.631,0,-667.854 0/1:244:221,23:221:8864:23:905:-8.30572,0,-723.774 0/1:160:122,38:122:4898:38:1473:-84.6575,0,-392.538 dDocent_Contig_7056 15 . T G 184.748 . AB=0.166667;ABP=66.7068;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=399;DPB=399;DPRA=1.42489;EPP=29.068;EPPR=843.37;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0;PAIREDR=0.968992;PAO=0;PQA=0;PQR=0;PRO=0;QA=480;QR=15276;RO=387;RPL=0;RPP=29.068;RPPR=843.37;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=387;SRP=843.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:75:75,0:75:2990:0:0:0,-22.5772,-269.203 0/0:36:36,0:36:1404:0:0:0,-10.8371,-126.627 0/0:56:56,0:56:2202:0:0:0,-16.8577,-198.357 0/1:66:55,11:55:2117:11:439:-19.9977,0,-170.856 0/0:66:66,0:66:2631:0:0:0,-19.868,-236.925 0/0:100:99,1:99:3932:1:41:0,-26.0084,-349.79 dDocent_Contig_7057 17 . C A 130.245 . AB=0.152542;ABP=64.8789;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=393;DPB=393;DPRA=0.954887;EPP=26.8965;EPPR=832.513;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9581;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997382;PAO=0;PQA=0;PQR=0;PRO=0;QA=435;QR=15159;RO=382;RPL=0;RPP=26.8965;RPPR=832.513;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=382;SRP=832.513;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:79:79,0:79:3133:0:0:0,-23.7814,-282.058 0/0:89:89,0:89:3530:0:0:0,-26.7917,-317.723 0/0:48:48,0:48:1917:0:0:0,-14.4494,-172.724 0/1:59:50,9:50:2001:9:355:-14.5474,0,-162.522 0/0:50:50,0:50:1929:0:0:0,-15.0515,-173.822 0/0:68:66,2:66:2649:2:80:0,-12.8785,-230.944 dDocent_Contig_7058 50 . G A 84692.8 . AB=0.103175;ABP=5000.84;AC=8;AF=0.666667;AN=12;AO=377;CIGAR=2X2M1X;DP=3654;DPB=3654;DPRA=0;EPP=821.655;EPPR=991.03;GTI=0;LEN=1;MEANALT=8.5;MQM=59.5146;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.96817;PAIREDR=0.991209;PAO=0;PQA=0;PQR=0;PRO=0;QA=14497;QR=17433;RO=455;RPL=376;RPP=812.993;RPPR=991.03;RPR=1;RUN=1;SAF=376;SAP=812.993;SAR=1;SRF=455;SRP=991.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:406:83,13,238,53:83:3168:13,238,53:493,9245,2043:-733.394,-717.96,-973.914,0,-219.456,-188.231,-590.754,-810.203,-92.2462,-834.668 0|1:586:131,24,371,46:131:4993:24,371,46:874,14221,1796:-1127.62,-1095.69,-1497.99,0,-338.173,-297.86,-1019.42,-1357.58,-261.897,-1415.1 0|1:366:58,21,232,43:58:2210:21,232,43:825,8890,1618:-710.885,-660.494,-835.429,0,-113.407,-111.421,-595.931,-709.337,-48.8457,-764.243 0|1:543:104,17,384,28:104:4012:17,384,28:622,14782,1031:-1181.27,-1161.76,-1486.07,0,-278.623,-213.847,-1128.29,-1406.9,-245.157,-1449.29 1|1:912:46,0,748,71:46:1796:0,748,71:0,28768,2760:-2425.51,-2439.36,-2586.99,-79.1594,-226.799,-1.6282,-2212.56,-2360.2,0,-2338.83 1|1:841:33,3,633,136:33:1254:3,633,136:92,24217,5249:-2301.42,-2303.98,-2405.9,-326.28,-421.732,-238.552,-1882.26,-1977.71,0,-1944.14 dDocent_Contig_7059 77 . G A 597.953 . AB=0.120069;ABP=733.97;AC=3;AF=0.25;AN=12;AO=77;CIGAR=1X;DP=931;DPB=931;DPRA=1.2566;EPP=170.214;EPPR=1857.45;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2919;QR=32777;RO=854;RPL=77;RPP=170.214;RPPR=1857.45;RPR=0;RUN=1;SAF=77;SAP=170.214;SAR=0;SRF=854;SRP=1857.45;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:83:76,7:76:2876:7:257:0,-1.50313,-235.537 0/1:183:154,29:154:5841:29:1075:-41.9581,0,-470.569 0/1:238:215,23:215:8528:23:902:-9.84239,0,-695.423 0/1:162:144,18:144:5457:18:685:-13.2166,0,-442.359 0/0:131:131,0:131:4962:0:0:0,-39.4349,-446.618 0/0:134:134,0:134:5113:0:0:0,-40.338,-460.188 dDocent_Contig_7060 125 . T C 67.2974 . AB=0.181818;ABP=22.3561;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=124;DPB=124;DPRA=1.07843;EPP=11.6962;EPPR=230.002;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.25;PAIREDR=0.675;PAO=0;PQA=0;PQR=0;PRO=0;QA=161;QR=4753;RO=120;RPL=4;RPP=11.6962;RPPR=230.002;RPR=0;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=263.587;SRR=120;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:31,0:31:1248:0:0:0,-9.33193,-112.59 0/0:12:12,0:12:466:0:0:0,-3.61236,-42.285 0/0:17:17,0:17:678:0:0:0,-5.11751,-61.3514 0/0:18:18,0:18:693:0:0:0,-5.41854,-62.6946 0/1:22:18,4:18:714:4:161:-8.25261,0,-57.961 0/0:24:24,0:24:954:0:0:0,-7.22472,-86.1577 dDocent_Contig_7061 40 . G A 768.941 . AB=0.112245;ABP=130.994;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=5M1X3M;DP=242;DPB=238.111;DPRA=0.75969;EPP=26.8965;EPPR=409.076;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0.497326;PAO=0;PQA=0;PQR=0;PRO=0;QA=441;QR=7294;RO=187;RPL=0;RPP=26.8965;RPPR=409.076;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=187;SRP=409.076;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:22:17,2,3,0:17:656:2,3,0:81,119,0:-4.67321,-3.10825,-56.3624,0,-47.1672,-52.9452,-9.79072,-56.9644,-53.8483,-63.6452 0|0:59:43,2,0,13:43:1661:2,0,13:79,0,492:-27.3951,-33.8357,-169.655,-40.3394,-170.257,-176.758,0,-129.942,-136.443,-132.53 0|1:22:17,0,4,0:17:669:0,4,0:0,160,0:-8.05381,-13.1713,-68.1978,0,-55.0176,-53.8134,-13.1713,-68.1978,-55.0176,-68.1978 0|0:42:29,1,0,12:29:1143:1,0,12:37,0,485:-31.2863,-36.9918,-130.72,-40.0162,-131.021,-134.047,0,-91.0331,-94.0593,-90.447 0|0:54:39,0,4,8:39:1516:0,4,8:0,162,321:-14.7073,-26.4475,-151.006,-13.0883,-137.647,-136.442,0,-124.555,-111.196,-122.147 0|0:43:42,0,0,0:42:1649:0,0,0:0,0,0:0,-12.6433,-148.265,-12.6433,-148.265,-148.265,-12.6433,-148.265,-148.265,-148.265 dDocent_Contig_7062 98 . N C 718.425 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=27;CIGAR=1X;DP=27;DPB=27;DPRA=0;EPP=61.6401;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=780;QR=0;RO=0;RPL=27;RPP=61.6401;RPPR=0;RPR=0;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:14:0,14:0:0:14:415:-37.6377,-4.21442,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:28:-2.79973,-0.30103,0 1/1:9:0,9:0:0:9:290:-26.4155,-2.70927,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:47:-4.38662,-0.90309,0 dDocent_Contig_7063 31 . G A 8373.79 . AB=0.686717;ABP=123.835;AC=6;AF=0.5;AN=12;AO=274;CIGAR=1X;DP=399;DPB=399;DPRA=0;EPP=597.994;EPPR=274.444;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10749;QR=4936;RO=125;RPL=0;RPP=597.994;RPPR=274.444;RPR=274;RUN=1;SAF=274;SAP=597.994;SAR=0;SRF=125;SRP=274.444;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:17,25:17:667:25:988:-76.5766,0,-47.7145 0/1:61:8,53:8:321:53:2077:-168.753,0,-10.8953 0/1:21:8,13:8:308:13:502:-39.1976,0,-21.7548 0/1:50:11,39:11:437:39:1532:-123.075,0,-24.6299 0/1:132:47,85:47:1870:85:3359:-262.635,0,-128.772 0/1:93:34,59:34:1333:59:2291:-178.364,0,-92.2412 dDocent_Contig_7064 31 . T G 10072.5 . AB=0.0371585;ABP=1705.56;AC=0;AF=0;AN=12;AO=34;CIGAR=1X3M1X2M1D21M1X10M;DP=1061;DPB=1057.17;DPRA=0;EPP=76.8404;EPPR=450.334;GTI=0;LEN=1;MEANALT=17.6;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1260;QR=7888;RO=206;RPL=34;RPP=76.8404;RPPR=450.334;RPR=0;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=206;SRP=450.334;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:144:21,4,81,15,7:21:798:4,81,15,7:152,2503,482,274:-172.787,-166.642,-230.891,0,-52.9891,-41.0719,-143.877,-196.864,-30.2402,-204.815,-156.611,-209.599,-42.9581,-186.834,-219.958 0|0:197:59,3,63,45,5:59:2253:3,63,45,5:110,1948,1505,188:-121.714,-130.483,-314.449,0,-175.883,-165.91,-29.3275,-205.214,-74.75,-200.659,-124.108,-299.986,-169.509,-198.84,-307.473 0|0:174:48,16,41,25,12:48:1842:16,41,25,12:607,1271,847,461:-76.4763,-41.1471,-187.544,0,-101.433,-138.864,-28.282,-129.718,-88.5708,-171.967,-53.1138,-154.551,-113.399,-141.684,-200.713 0|0:173:45,6,56,27,12:45:1736:6,56,27,12:213,1721,880,466:-109.39,-105.584,-246.365,0,-125.241,-125.734,-58.8204,-184.059,-78.4882,-193.282,-84.6867,-209.925,-104.346,-163.164,-223.664 0|0:227:27,5,52,104,14:27:1022:5,52,104,14:178,1596,3532,529:-283.323,-276.947,-359.233,-177.555,-246.843,-245.693,-30.0744,-99.3681,0,-82.565,-248.107,-317.396,-218.004,-70.5272,-327.685 0|0:146:6,0,39,75,14:6:237:0,39,75,14:0,1210,2568,535:-254.782,-256.588,-276.095,-169.96,-189.466,-177.726,-67.0806,-86.5901,0,-64.0129,-212.714,-232.221,-145.592,-42.7086,-228.006 dDocent_Contig_7065 22 . T C 6484.26 . AB=0.138961;ABP=3946.46;AC=4;AF=0.333333;AN=12;AO=593;CIGAR=1X;DP=5742;DPB=5742;DPRA=0;EPP=1290.69;EPPR=11160;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999805;PAO=0;PQA=0;PQR=0;PRO=0;QA=23150;QR=186879;RO=5138;RPL=0;RPP=1290.69;RPPR=11160;RPR=593;RUN=1;SAF=593;SAP=1290.69;SAR=0;SRF=5138;SRP=11160;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:818:702,112:702:25515:112:4366:-147.76,0,-2050.03 0/1:1067:957,109:957:34630:109:4194:-56.1507,0,-2793.64 0/1:710:536,174:536:19600:174:6868:-404.1,0,-1549.39 0/1:888:796,89:796:28876:89:3490:-47.6366,0,-2330.94 0/0:1300:1262,36:1262:45920:36:1360:0,-268.193,-4007.75 0/0:959:885,73:885:32338:73:2872:0,-29.8829,-2650.19 dDocent_Contig_7066 29 . C T 284.196 . AB=0.117155;ABP=307.28;AC=1;AF=0.0833333;AN=12;AO=31;CIGAR=1X;DP=1184;DPB=1184;DPRA=1.0359;EPP=70.3259;EPPR=2506.72;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.999133;PAO=0;PQA=0;PQR=0;PRO=0;QA=1252;QR=46111;RO=1153;RPL=0;RPP=70.3259;RPPR=2506.72;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=1153;SRP=2506.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:144:144,0:144:5766:0:0:0,-43.3483,-518.741 0/0:165:162,3:162:6536:3:123:0,-38.2052,-576.465 0/0:225:225,0:225:8935:0:0:0,-67.7317,-803.615 0/0:176:176,0:176:7054:0:0:0,-52.9813,-634.505 0/0:235:235,0:235:9323:0:0:0,-70.742,-838.529 0/1:239:211,28:211:8497:28:1129:-29.9425,0,-692.277 dDocent_Contig_7067 13 . A G 774.219 . AB=0.24;ABP=91.0852;AC=4;AF=0.333333;AN=12;AO=43;CIGAR=1X;DP=575;DPB=575;DPRA=0;EPP=96.3836;EPPR=1158.23;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1707;QR=21042;RO=532;RPL=0;RPP=96.3836;RPPR=1158.23;RPR=43;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=532;SRP=1158.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:40:35,5:35:1407:5:202:-6.52088,0,-114.837 0/1:40:31,9:31:1212:9:363:-20.9931,0,-97.3108 0/1:40:22,18:22:873:18:697:-51.0108,0,-66.8368 0/1:30:26,4:26:1005:4:164:-6.119,0,-81.7048 0/0:219:218,1:218:8630:1:38:0,-62.1283,-772.43 0/0:206:200,6:200:7915:6:243:0,-39.7642,-689.691 dDocent_Contig_7068 1 . N G 153.072 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=158;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 1/1:3:0,3:0:0:3:117:-10.9102,-0.90309,0 ./.:.:.:.:.:.:.:. dDocent_Contig_7070 13 . G C 43756.4 . AB=0.384824;ABP=470.701;AC=6;AF=0.5;AN=12;AO=1562;CIGAR=1X;DP=4059;DPB=4059;DPRA=0;EPP=3394.85;EPPR=5416.49;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=1;PAIREDR=0.973927;PAO=0;PQA=0;PQR=0;PRO=0;QA=62365;QR=98600;RO=2493;RPL=0;RPP=3394.85;RPPR=5416.49;RPR=1562;RUN=1;SAF=1562;SAP=3394.85;SAR=0;SRF=2493;SRP=5416.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:564:266,297:266:10609:297:11837:-894.631,0,-784.243 0/1:756:542,214:542:21359:214:8554:-541.801,0,-1693.01 0/1:700:354,345:354:13994:345:13801:-1030.22,0,-1047.62 0/1:830:474,354:474:18766:354:14177:-1025.19,0,-1437.76 0/1:628:375,253:375:14821:253:10089:-718.301,0,-1143.76 0/1:581:482,99:482:19051:99:3907:-176.726,0,-1538.18 dDocent_Contig_7071 88 . G C 244.609 . AB=0.205128;ABP=61.9184;AC=1;AF=0.0833333;AN=12;AO=40;CIGAR=1X;DP=755;DPB=755;DPRA=0;EPP=89.8692;EPPR=1553.44;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997199;PAO=0;PQA=0;PQR=0;PRO=0;QA=1365;QR=24204;RO=714;RPL=40;RPP=89.8692;RPPR=1553.44;RPR=0;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=714;SRP=1553.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:128:121,7:121:4095:7:231:0,-17.4192,-347.649 0/0:100:97,3:97:3298:3:103:0,-20.493,-287.444 0/0:198:192,6:192:6535:6:208:0,-40.5443,-569.22 0/0:129:125,3:125:4257:3:104:0,-28.9754,-373.696 0/0:122:117,5:117:3977:5:173:0,-20.8154,-342.232 0/1:78:62,16:62:2042:16:546:-25.9838,0,-160.564 dDocent_Contig_7072 12 . A G 1140.09 . AB=0.127577;ABP=937.874;AC=1;AF=0.0833333;AN=12;AO=237;CIGAR=1X;DP=5395;DPB=5395;DPRA=0.692002;EPP=517.649;EPPR=11199.1;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999224;PAO=0;PQA=0;PQR=0;PRO=0;QA=9284;QR=203313;RO=5156;RPL=0;RPP=517.649;RPPR=11199.1;RPR=237;RUN=1;SAF=237;SAP=517.649;SAR=0;SRF=5156;SRP=11199.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:751:694,57:694:27338:57:2221:0,-26.0055,-2258.07 0/0:863:816,47:816:32051:47:1862:0,-91.9981,-2714.07 0/0:742:707,34:707:27982:34:1322:0,-104.197,-2396.76 0/1:776:677,99:677:26709:99:3879:-115.532,0,-2167.99 0/0:1262:1261,0:1261:49731:0:0:0,-379.599,-4471.13 0/0:1001:1001,0:1001:39502:0:0:0,-301.331,-3551.71 dDocent_Contig_7073 98 . N G 505.652 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=17;CIGAR=2X;DP=17;DPB=21.5;DPRA=0;EPP=39.9253;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=537;QR=0;RO=0;RPL=17;RPP=39.9253;RPPR=0;RPR=0;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:6:0,6:0:0:6:201:-18.4196,-1.80618,0 1|1:2:0,2:0:0:2:40:-3.79948,-0.60206,0 .:.:.:.:.:.:.:. 1|1:1:0,1:0:0:1:27:-2.69978,-0.30103,0 1|1:6:0,6:0:0:6:204:-18.694,-1.80618,0 1|1:2:0,2:0:0:2:65:-6.17329,-0.60206,0 dDocent_Contig_7074 9 . A G 1573.02 . AB=0.266917;ABP=128.531;AC=3;AF=0.25;AN=12;AO=71;CIGAR=1X;DP=322;DPB=322;DPRA=4.75;EPP=157.185;EPPR=548.05;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2685;QR=9621;RO=251;RPL=0;RPP=157.185;RPPR=548.05;RPR=71;RUN=1;SAF=71;SAP=157.185;SAR=0;SRF=251;SRP=548.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:15:12,3:12:453:3:113:-6.02396,0,-36.5982 0/0:21:21,0:21:811:0:0:0,-6.32163,-73.3158 0/0:19:19,0:19:733:0:0:0,-5.71957,-66.301 0/0:16:16,0:16:617:0:0:0,-4.81648,-55.8696 0/1:122:96,26:96:3690:26:982:-51.9649,0,-295.487 0/1:129:87,42:87:3317:42:1590:-104.535,0,-259.837 dDocent_Contig_7075 29 . C A 4575.4 . AB=0.461988;ABP=7.30245;AC=6;AF=0.5;AN=12;AO=158;CIGAR=1X;DP=342;DPB=342;DPRA=0;EPP=346.103;EPPR=402.561;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.664557;PAIREDR=0.983696;PAO=0;PQA=0;PQR=0;PRO=0;QA=6333;QR=7265;RO=184;RPL=0;RPP=346.103;RPPR=402.561;RPR=158;RUN=1;SAF=158;SAP=346.103;SAR=0;SRF=184;SRP=402.561;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:31,23:31:1212:23:925:-67.2983,0,-93.1002 0/1:58:31,27:31:1216:27:1086:-80.568,0,-92.2498 0/1:59:32,27:32:1289:27:1094:-80.9841,0,-98.5093 0/1:51:31,20:31:1245:20:801:-57.0545,0,-96.9689 0/1:43:26,17:26:1003:17:672:-47.8646,0,-77.615 0/1:77:33,44:33:1300:44:1755:-134.993,0,-94.0814 dDocent_Contig_7076 17 . A G 1248.44 . AB=0.196825;ABP=254.494;AC=1;AF=0.0833333;AN=12;AO=68;CIGAR=1X;DP=1117;DPB=1117;DPRA=2.20716;EPP=150.67;EPPR=2280.88;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.981888;PAO=0;PQA=0;PQR=0;PRO=0;QA=2694;QR=41862;RO=1049;RPL=0;RPP=150.67;RPPR=2280.88;RPR=68;RUN=1;SAF=68;SAP=150.67;SAR=0;SRF=1049;SRP=2280.88;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:125:125,0:125:4977:0:0:0,-37.6287,-447.822 0/0:193:193,0:193:7759:0:0:0,-58.0988,-697.89 0/0:76:76,0:76:3058:0:0:0,-22.8783,-275.289 0/0:137:137,0:137:5524:0:0:0,-41.2411,-496.97 0/1:315:253,62:253:10066:62:2456:-126.367,0,-810.491 0/0:271:265,6:265:10478:6:238:0,-59.7856,-920.573 dDocent_Contig_7077 17 . A C 10806.1 . AB=0.0176101;ABP=1609.87;AC=0;AF=0;AN=12;AO=14;CIGAR=2X;DP=989;DPB=989;DPRA=0;EPP=33.4109;EPPR=1279.84;GTI=0;LEN=1;MEANALT=2;MQM=59;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.928571;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=556;QR=23285;RO=588;RPL=0;RPP=33.4109;RPPR=1279.84;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=588;SRP=1279.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:194:122,0,71:122:4824:0,71:0,2837:-196.925,-233.651,-630.611,0,-396.949,-375.576 0|0:213:98,3,112:98:3845:3,112:118,4459:-337.647,-357.442,-672.722,0,-306.479,-282.469 0|0:245:174,1,70:174:6900:1,70:40,2827:-180.676,-229.76,-797.391,0,-564.639,-546.862 0|0:199:93,1,105:93:3689:1,105:41,4151:-313.556,-338.168,-641.526,0,-300.261,-272.037 0|0:81:60,3,18:60:2379:3,18:118,730:-42.1499,-50.5078,-245.415,0,-186.115,-190.402 0|0:57:41,6,10:41:1648:6,10:239,403:-20.8782,-13.6093,-147.61,0,-116.199,-132.801 dDocent_Contig_7078 54 . C G 633.036 . AB=0.107053;ABP=1067.9;AC=1;AF=0.0833333;AN=12;AO=188;CIGAR=1X;DP=5751;DPB=5751;DPRA=0.742015;EPP=411.247;EPPR=12072.1;GTI=0;LEN=1;MEANALT=1.6;MQM=60;MQMR=59.9971;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.99982;PAO=0;PQA=0;PQR=0;PRO=0;QA=7394;QR=221175;RO=5558;RPL=188;RPP=411.247;RPPR=12072.1;RPR=0;RUN=1;SAF=188;SAP=411.247;SAR=0;SRF=5558;SRP=12072.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:794:709,85:709:28269:85:3372:-64.5255,0,-2302.68 0/0:1088:1044,42:1044:41530:42:1629:0,-180.465,-3586.99 0/0:741:708,33:708:28117:33:1304:0,-105.441,-2410.43 0/0:923:916,7:916:36511:7:267:0,-253.462,-3258.24 0/0:1221:1221,0:1221:48626:0:0:0,-367.558,-4371.75 0/0:984:960,21:960:38122:21:822:0,-221.401,-3353.18 dDocent_Contig_7079 61 . T A 756.857 . AB=0.313131;ABP=33.038;AC=1;AF=0.0833333;AN=12;AO=31;CIGAR=1X;DP=574;DPB=574;DPRA=1.04211;EPP=70.3259;EPPR=1182.12;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1186;QR=21449;RO=543;RPL=31;RPP=70.3259;RPPR=1182.12;RPR=0;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=543;SRP=1182.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1079:0:0:0,-8.12781,-97.4031 0/0:113:113,0:113:4444:0:0:0,-34.0164,-399.907 0/0:82:82,0:82:3216:0:0:0,-24.6845,-289.513 0/0:168:168,0:168:6665:0:0:0,-50.573,-599.577 0/0:85:85,0:85:3379:0:0:0,-25.5875,-304.164 0/1:99:68,31:68:2666:31:1186:-77.2086,0,-210.276 dDocent_Contig_7080 16 . C T 150.23 . AB=0.09375;ABP=645.223;AC=1;AF=0.0833333;AN=12;AO=82;CIGAR=1X;DP=2523;DPB=2523;DPRA=0.840595;EPP=181.071;EPPR=5297.06;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.99918;PAO=0;PQA=0;PQR=0;PRO=0;QA=3300;QR=98037;RO=2438;RPL=0;RPP=181.071;RPPR=5297.06;RPR=82;RUN=1;SAF=82;SAP=181.071;SAR=0;SRF=2438;SRP=5297.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:426:409,16:409:16429:16:649:0,-69.5293,-1418.49 0/1:448:405,42:405:16185:42:1681:-16.5458,0,-1320.38 0/0:289:278,11:278:11163:11:442:0,-46.8644,-963.704 0/0:419:406,13:406:16383:13:528:0,-78.2645,-1425.23 0/0:498:498,0:498:20040:0:0:0,-149.913,-1801.83 0/0:443:442,0:442:17837:0:0:0,-133.055,-1603.36 dDocent_Contig_7081 40 . C A 4004.02 . AB=0.20915;ABP=677.529;AC=4;AF=0.333333;AN=12;AO=203;CIGAR=1X;DP=1280;DPB=1280;DPRA=0;EPP=443.819;EPPR=2330.84;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=59.9582;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.986989;PAO=0;PQA=0;PQR=0;PRO=0;QA=8029;QR=43093;RO=1076;RPL=0;RPP=443.819;RPPR=2330.84;RPR=203;RUN=1;SAF=203;SAP=443.819;SAR=0;SRF=1076;SRP=2339.51;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:144:140,4:140:5621:4:161:0,-28.4734,-490.818 0/1:177:161,16:161:6433:16:639:-4.56133,0,-525.417 0/1:291:260,30:260:10438:30:1197:-20.347,0,-851.049 0/0:218:211,7:211:8457:7:277:0,-40.3274,-735.327 0/1:236:135,101:135:5405:101:3962:-285.545,0,-415.244 0/1:214:169,45:169:6739:45:1793:-97.1702,0,-541.445 dDocent_Contig_7082 21 . A T 290.849 . AB=0.147287;ABP=142.405;AC=1;AF=0.0833333;AN=12;AO=26;CIGAR=1X;DP=907;DPB=907;DPRA=0.998347;EPP=59.4686;EPPR=1916.08;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9773;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.0397276;PAO=0;PQA=0;PQR=0;PRO=0;QA=1050;QR=34988;RO=881;RPL=0;RPP=59.4686;RPPR=1916.08;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=881;SRP=1916.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:154:154,0:154:6141:0:0:0,-46.3586,-552.458 0/0:153:153,0:153:6084:0:0:0,-46.0576,-547.348 0/0:95:95,0:95:3795:0:0:0,-28.5978,-341.554 0/0:203:203,0:203:8015:0:0:0,-61.1091,-720.645 0/0:173:166,7:166:6566:7:282:0,-26.3256,-564.932 0/1:129:110,19:110:4387:19:768:-30.6078,0,-355.952 dDocent_Contig_7083 11 . A T 1666.64 . AB=0.179283;ABP=451.51;AC=2;AF=0.166667;AN=12;AO=99;CIGAR=1X;DP=1370;DPB=1370;DPRA=1.14062;EPP=217.986;EPPR=2762.95;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9843;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.927616;PAO=0;PQA=0;PQR=0;PRO=0;QA=3928;QR=50793;RO=1271;RPL=0;RPP=217.986;RPPR=2762.95;RPR=99;RUN=1;SAF=99;SAP=217.986;SAR=0;SRF=1271;SRP=2762.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:228:219,9:219:8775:9:366:0,-35.3297,-755.926 0/0:270:270,0:270:10789:0:0:0,-81.2781,-970.276 0/0:138:138,0:138:5527:0:0:0,-41.5421,-497.242 0/0:232:232,0:232:9247:0:0:0,-69.839,-831.669 0/1:267:202,65:202:8111:65:2573:-151.325,0,-649.154 0/1:235:210,25:210:8344:25:989:-18.5613,0,-679.747 dDocent_Contig_7084 16 . A G 326.191 . AB=0.0654762;ABP=278.529;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=4M1X6M;DP=524;DPB=520.182;DPRA=1.01149;EPP=42.0968;EPPR=1001.89;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.965217;PAO=0;PQA=0;PQR=0;PRO=0;QA=722;QR=18227;RO=460;RPL=0;RPP=42.0968;RPPR=1001.89;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=460;SRP=1001.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:67:49,6,4,8:49:1944:6,4,8:240,160,317:-11.3378,-6.31757,-164.534,-12.9075,-153.16,-171.726,0,-140.25,-146.84,-157.612 0|0:101:82,11,5,3:82:3256:11,5,3:439,177,120:-11.4867,0,-264.759,-21.7733,-253.663,-288.313,-26.2835,-258.185,-279.933,-293.437 0|0:86:72,11,2,0:72:2849:11,2,0:445,81,0:-15.0164,0,-231.149,-30.0113,-227.781,-263.87,-36.6905,-234.46,-264.472,-271.151 0|0:96:83,5,1,7:83:3287:5,1,7:199,36,285:0,-8.60088,-277.631,-22.0514,-276.199,-292.284,-1.46666,-255.624,-269.073,-269.903 0|0:96:96,0,0,0:96:3793:0,0,0:0,0,0:0,-28.8989,-341.413,-28.8989,-341.413,-341.413,-28.8989,-341.413,-341.413,-341.413 0|0:78:78,0,0,0:78:3098:0,0,0:0,0,0:0,-23.4803,-278.924,-23.4803,-278.924,-278.924,-23.4803,-278.924,-278.924,-278.924 dDocent_Contig_7085 17 . T A 68.9547 . AB=0.0894855;ABP=657.313;AC=1;AF=0.0833333;AN=12;AO=129;CIGAR=1X;DP=3680;DPB=3680;DPRA=0.854441;EPP=283.13;EPPR=7703.05;GTI=0;LEN=1;MEANALT=1.6;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999154;PAO=0;PQA=0;PQR=0;PRO=0;QA=5166;QR=141300;RO=3546;RPL=0;RPP=283.13;RPPR=7703.05;RPR=129;RUN=1;SAF=129;SAP=283.13;SAR=0;SRF=3546;SRP=7703.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:621:585,35:585:23291:35:1408:0,-60.065,-1967.19 0/0:702:689,13:689:27492:13:526:0,-163.636,-2424.1 0/1:447:407,40:407:16149:40:1586:-8.41835,0,-1317.57 0/0:673:632,40:632:25191:40:1614:0,-57.2103,-2119.46 0/0:539:536,1:536:21351:1:32:0,-158.794,-1916.51 0/0:698:697,0:697:27826:0:0:0,-209.818,-2501.44 dDocent_Contig_7086 16 . G A 21682.9 . AB=0.19779;ABP=1438.86;AC=0;AF=0;AN=12;AO=358;CIGAR=1X3M1X;DP=3216;DPB=3158.4;DPRA=0;EPP=780.397;EPPR=4120.12;GTI=0;LEN=1;MEANALT=5.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13989;QR=74576;RO=1896;RPL=0;RPP=780.397;RPPR=4120.12;RPR=358;RUN=1;SAF=358;SAP=780.397;SAR=0;SRF=1896;SRP=4120.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:259:196,0,29,34:196:7731:0,29,34:0,1152,1353:-52.3916,-111.393,-747.47,-16.5526,-652.628,-643.898,0,-636.076,-541.235,-625.841 0|0:520:396,0,42,80:396:15597:0,42,80:0,1651,3200:-144.377,-263.585,-1546.65,-127.792,-1410.85,-1398.21,0,-1283.07,-1147.27,-1258.98 0|0:186:151,0,33,1:151:5917:0,33,1:0,1271,41:-58.8652,-104.321,-590.864,0,-486.521,-476.587,-100.936,-587.479,-483.137,-587.178 0|0:441:312,0,39,89:312:12323:0,39,89:0,1488,3526:-196.284,-290.205,-1304.2,-168.166,-1182.16,-1170.42,0,-1014.01,-891.968,-987.218 0|0:1037:588,165,0,279:588:23012:165,0,279:6430,0,11144:-740.827,-389.366,-2231.69,-917.833,-2281.36,-2809.83,0,-1363.53,-1892,-1808.01 0|0:773:253,193,1,325:253:9996:193,1,325:7559,41,12912:-986.763,-441.389,-1205.84,-1059.54,-1260.55,-1881.79,0,-201.013,-819.165,-724.714 dDocent_Contig_7087 15 . A C 199.207 . AB=0.053973;ABP=1155.57;AC=0;AF=0;AN=12;AO=36;CIGAR=7M1X2M;DP=1835;DPB=1811;DPRA=2.65737;EPP=81.1833;EPPR=3607.65;GTI=0;LEN=1;MEANALT=7;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1447;QR=64955;RO=1660;RPL=0;RPP=81.1833;RPPR=3607.65;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=1660;SRP=3607.65;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:135:120,12,0:120:4686:12,0:448,0:-0.577919,0,-381.645,-36.7015,-385.258,-421.937 0|0:146:144,0,0:144:5648:0,0:0,0:0,-43.3483,-507.977,-43.3483,-507.977,-507.977 0|0:93:89,2,0:89:3499:2,0:77,0:0,-20.4593,-307.696,-26.7917,-308.298,-314.62 0|0:280:251,26,0:251:9797:26,0:951,0:-2.2757,0,-797.664,-77.8342,-805.491,-883.196 0|0:667:563,63,36:563:22027:63,36:2327,1447:-20.8276,0,-1792.09,-71.053,-1691.82,-1871.29 0|0:514:493,17,0:493:19298:17,0:610,0:0,-98.6099,-1680.33,-148.408,-1685.45,-1735.2 dDocent_Contig_7088 40 . G C 1628.54 . AB=0.157143;ABP=646.262;AC=2;AF=0.166667;AN=12;AO=168;CIGAR=1X;DP=1647;DPB=1647;DPRA=0;EPP=367.818;EPPR=3208.1;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99729;PAO=0;PQA=0;PQR=0;PRO=0;QA=6658;QR=58174;RO=1476;RPL=0;RPP=367.818;RPPR=3208.1;RPR=168;RUN=1;SAF=168;SAP=367.818;SAR=0;SRF=1476;SRP=3208.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:213:198,15:198:7797:15:586:0,-11.0549,-648.281 0/0:259:243,16:243:9574:16:630:0,-20.9366,-804.06 0/0:145:138,7:138:5384:7:255:0,-20.3537,-461.114 0/1:273:237,35:237:9327:35:1380:-42.473,0,-756.943 0/0:400:367,31:367:14558:31:1241:0,-8.22542,-1197.2 0/1:357:293,64:293:11534:64:2566:-123.603,0,-929.851 dDocent_Contig_7089 135 . G A 528.22 . AB=0.129794;ABP=406.565;AC=1;AF=0.0833333;AN=12;AO=75;CIGAR=1X;DP=1588;DPB=1588;DPRA=1.27507;EPP=165.871;EPPR=3281.93;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2976;QR=59801;RO=1510;RPL=0;RPP=165.871;RPPR=3281.93;RPR=75;RUN=1;SAF=0;SAP=165.871;SAR=75;SRF=0;SRP=3281.93;SRR=1510;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:186:185,1:185:7373:1:40:0,-51.9959,-659.179 0/0:302:301,0:301:12066:0:0:0,-90.61,-1084.87 0/0:196:196,0:196:7726:0:0:0,-59.0019,-694.93 0/0:200:199,0:199:7763:0:0:0,-59.905,-697.863 0/1:339:294,44:294:11589:44:1733:-54.3449,0,-940.376 0/0:365:335,30:335:13284:30:1203:0,-1.33839,-1086 dDocent_Contig_7090 10 . C A 30397.8 . AB=0.140581;ABP=4368.95;AC=2;AF=0.166667;AN=12;AO=547;CIGAR=1X1M2X;DP=3891;DPB=3891;DPRA=0;EPP=1190.81;EPPR=5151.57;GTI=0;LEN=1;MEANALT=3.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=21613;QR=94022;RO=2371;RPL=0;RPP=1190.81;RPPR=5151.57;RPR=547;RUN=1;SAF=547;SAP=1190.81;SAR=0;SRF=2371;SRP=5151.57;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:460:315,65,76:315:12499:65,76:2577,3039:-155.49,-38.1999,-1047.49,0,-816.743,-1005.98 0|1:589:369,166,54:369:14638:166,54:6586,2151:-431.052,0,-1154.93,-365.015,-1027.79,-1553.66 0|0:641:420,108,113:420:16644:108,113:4257,4467:-241.129,-17.3462,-1354.74,0,-1019.69,-1335.89 0|1:638:453,130,54:453:17943:130,54:5110,2166:-283.914,0,-1437.65,-241.821,-1298.32,-1702.35 0|0:816:447,68,300:447:17738:68,300:2686,11939:-848.439,-761.98,-2201.64,0,-1239.12,-1369.83 0|0:747:367,10,369:367:14560:10,369:397,14600:-1090.97,-1168.77,-2364.27,0,-1165.84,-1087.44 dDocent_Contig_7091 173 . A G 6299.83 . AB=0.406934;ABP=44.2366;AC=4;AF=0.333333;AN=12;AO=246;CIGAR=1X1M;DP=858;DPB=858;DPRA=0;EPP=537.193;EPPR=1308.07;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9750;QR=23806;RO=601;RPL=246;RPP=537.193;RPPR=1308.07;RPR=0;RUN=1;SAF=0;SAP=537.193;SAR=246;SRF=0;SRP=1308.07;SRR=601;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:210:169,0,41:169:6725:0,41:0,1640:-84.611,-135.485,-689.173,0,-554.087,-541.744 0|0:166:153,0,11:153:6014:0,11:0,446:0,-46.0576,-540.67,-9.16359,-503.89,-500.578 0|1:132:101,0,31:101:4030:0,31:0,1258:-73.7498,-104.154,-436.036,0,-332.286,-322.954 0|0:144:132,0,12:132:5235:0,12:0,424:0,-39.736,-470.669,-4.87668,-436.166,-432.554 0|1:101:19,9,73:19:717:9,73:367,2889:-232.01,-207.449,-263.483,0,-28.4376,-36.7508 0|1:105:27,0,78:27:1085:0,78:0,3093:-246.834,-254.962,-344.373,0,-89.8108,-66.3304 dDocent_Contig_7092 28 . T G 150105 . AB=0.912647;ABP=1137.41;AC=11;AF=0.916667;AN=12;AO=4355;CIGAR=1X;DP=4498;DPB=4498;DPRA=0;EPP=9459.77;EPPR=309.188;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.999541;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=172546;QR=5602;RO=141;RPL=0;RPP=9459.77;RPPR=309.188;RPR=4355;RUN=1;SAF=4355;SAP=9459.77;SAR=0;SRF=141;SRP=309.188;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:702:15,686:15:584:686:27139:-2387.28,-158.526,0 1/1:818:19,799:19:762:799:31593:-2771.66,-177.34,0 1/1:454:23,431:23:924:431:17132:-1457.04,-53.2019,0 1/1:745:7,738:7:283:738:29272:-2606.07,-198.424,0 1/1:1012:11,1001:11:443:1001:39591:-3519.37,-264.417,0 0/1:767:66,700:66:2606:700:27819:-2270.29,0,-3.68007 dDocent_Contig_7093 21 . C A 675.821 . AB=0.155894;ABP=273.503;AC=1;AF=0.0833333;AN=12;AO=98;CIGAR=1X;DP=1895;DPB=1895;DPRA=0;EPP=215.815;EPPR=3905.15;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994435;PAO=0;PQA=0;PQR=0;PRO=0;QA=3909;QR=71993;RO=1797;RPL=0;RPP=215.815;RPPR=3905.15;RPR=98;RUN=1;SAF=98;SAP=215.815;SAR=0;SRF=1797;SRP=3905.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:268:248,20:248:9917:20:792:0,-9.08178,-820.261 0/1:263:222,41:222:8919:41:1645:-69.105,0,-722.974 0/0:165:157,8:157:6256:8:322:0,-20.3218,-533.421 0/0:311:307,4:307:12308:4:161:0,-78.7454,-1091.93 0/0:489:471,18:471:18887:18:705:0,-83.4426,-1634.43 0/0:399:392,7:392:15706:7:284:0,-94.1775,-1386.31 dDocent_Contig_7094 59 . C A 373.052 . AB=0.243243;ABP=45.3834;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X;DP=236;DPB=236;DPRA=1.26923;EPP=50.7827;EPPR=467.705;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.954545;PAIREDR=0.953271;PAO=0;PQA=0;PQR=0;PRO=0;QA=849;QR=8469;RO=214;RPL=22;RPP=50.7827;RPPR=467.705;RPR=0;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=214;SRP=467.705;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:43:43,0:43:1699:0:0:0,-12.9443,-153.139 0/0:38:38,0:38:1506:0:0:0,-11.4391,-135.784 0/0:58:54,4:54:2139:4:159:0,-2.76778,-177.997 0/0:23:23,0:23:875:0:0:0,-6.92369,-79.0511 0/1:39:32,7:32:1285:7:281:-13.9214,0,-104.175 0/1:35:24,11:24:965:11:409:-26.6056,0,-76.614 dDocent_Contig_7095 43 . T C 129.741 . AB=0.115108;ABP=181.868;AC=1;AF=0.0833333;AN=12;AO=34;CIGAR=1X;DP=1069;DPB=1069;DPRA=0.993017;EPP=76.8404;EPPR=2250.48;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.998068;PAO=0;PQA=0;PQR=0;PRO=0;QA=1340;QR=40798;RO=1035;RPL=0;RPP=76.8404;RPPR=2250.48;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=1035;SRP=2250.48;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:139:123,16:123:4852:16:619:-14.196,0,-394.761 0/0:151:143,8:143:5658:8:321:0,-16.1979,-479.798 0/0:269:262,7:262:10299:7:282:0,-55.2241,-900.553 0/0:152:149,3:149:5851:3:118:0,-34.7544,-515.418 0/0:186:186,0:186:7285:0:0:0,-55.9916,-655.352 0/0:172:172,0:172:6853:0:0:0,-51.7772,-616.481 dDocent_Contig_7096 9 . A G 2661.09 . AB=0.218241;ABP=426.398;AC=4;AF=0.333333;AN=12;AO=134;CIGAR=1X;DP=738;DPB=738;DPRA=2.47581;EPP=293.988;EPPR=1305.91;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993377;PAO=0;PQA=0;PQR=0;PRO=0;QA=5078;QR=23173;RO=604;RPL=0;RPP=293.988;RPPR=1314.58;RPR=134;RUN=1;SAF=134;SAP=293.988;SAR=0;SRF=603;SRP=1305.91;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:190:127,63:127:4867:63:2416:-160.448,0,-380.861 0/1:129:114,15:114:4333:15:571:-12.897,0,-351.216 0/1:113:101,12:101:3896:12:439:-5.82876,0,-316.718 0/1:182:138,44:138:5318:44:1652:-94.1571,0,-423.825 0/0:59:59,0:59:2271:0:0:0,-17.7608,-204.609 0/0:65:65,0:65:2488:0:0:0,-19.5669,-224.122 dDocent_Contig_7097 34 . G A 382.358 . AB=0.102041;ABP=946.67;AC=2;AF=0.166667;AN=12;AO=90;CIGAR=1X;DP=1768;DPB=1768;DPRA=1.23158;EPP=198.443;EPPR=3644.57;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997018;PAO=0;PQA=0;PQR=0;PRO=0;QA=3513;QR=66614;RO=1677;RPL=0;RPP=198.443;RPPR=3644.57;RPR=90;RUN=1;SAF=90;SAP=198.443;SAR=0;SRF=1677;SRP=3644.57;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:310:294,16:294:11748:16:610:0,-38.084,-1001.27 0/1:366:330,36:330:13161:36:1415:-17.4362,0,-1073.35 0/0:250:247,3:247:9864:3:116:0,-64.4405,-876.301 0/1:320:285,34:285:11312:34:1332:-24.0214,0,-921.201 0/0:247:247,0:247:9704:0:0:0,-74.3544,-872.775 0/0:275:274,1:274:10825:1:40:0,-78.7876,-969.557 dDocent_Contig_7098 107 . N A 61.7813 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=61;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:46:-4.36869,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:15:-1.49999,-0.30103,0 dDocent_Contig_7099 36 . C T 63.5633 . AB=0.0967742;ABP=221.909;AC=1;AF=0.0833333;AN=12;AO=33;CIGAR=1X2M1X;DP=803;DPB=803;DPRA=1.0094;EPP=74.6689;EPPR=1657.67;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.818182;PAIREDR=0.790026;PAO=0;PQA=0;PQR=0;PRO=0;QA=1309;QR=30324;RO=762;RPL=0;RPP=74.6689;RPPR=1657.67;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=762;SRP=1657.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:133:124,9,0:124:4905:9,0:358,0:0,-7.4534,-408.776,-37.3277,-411.485,-440.962 0|0:152:147,4,0:147:5849:4,0:161,0:0,-30.9882,-511.354,-44.2514,-512.558,-525.827 0|0:97:86,5,6:86:3432:5,6:187,243:0,-10.5964,-291.734,-5.8348,-273.202,-286.7 0|1:155:139,15,0:139:5520:15,0:603,0:-7.87921,0,-449.928,-49.7224,-454.443,-504.136 0|0:163:163,0,0:163:6499:0,0:0,0:0,-49.0679,-584.657,-49.0679,-584.657,-584.657 0|0:103:103,0,0:103:4119:0,0:0,0:0,-31.0061,-370.693,-31.0061,-370.693,-370.693 dDocent_Contig_7100 107 . N G 72.2351 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=72;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:15:-1.49999,-0.30103,0 1/1:2:0,2:0:0:2:57:-5.41407,-0.60206,0 dDocent_Contig_7101 17 . T C 719.871 . AB=0.148936;ABP=355.205;AC=1;AF=0.0833333;AN=12;AO=50;CIGAR=1X;DP=2353;DPB=2353;DPRA=0.72338;EPP=111.584;EPPR=5001.74;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=59.9996;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999131;PAO=0;PQA=0;PQR=0;PRO=0;QA=1925;QR=91581;RO=2302;RPL=0;RPP=111.584;RPPR=5001.74;RPR=50;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=2302;SRP=5001.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:368:368,0:368:14537:0:0:0,-110.779,-1307.25 0/0:409:409,0:409:16313:0:0:0,-123.121,-1466.84 0/0:552:552,0:552:21987:0:0:0,-166.169,-1976.9 0/0:296:295,1:295:11796:1:10:0,-88.1049,-1059.81 0/0:399:399,0:399:15821:0:0:0,-120.111,-1422.64 0/1:329:279,49:279:11127:49:1915:-73.51,0,-901.602 dDocent_Contig_7103 7 . A T 31.998 . AB=0.1;ABP=141.985;AC=1;AF=0.0833333;AN=12;AO=30;CIGAR=1X;DP=1321;DPB=1321;DPRA=0;EPP=68.1545;EPPR=2795.52;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=59.9432;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0333333;PAIREDR=0.981337;PAO=0;PQA=0;PQR=0;PRO=0;QA=1129;QR=49082;RO=1286;RPL=0;RPP=68.1545;RPPR=2795.52;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=1286;SRP=2795.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:131:125,6:125:4753:6:225:0,-18.8247,-407.209 0/0:172:168,4:168:6400:4:142:0,-38.6489,-561.886 0/0:151:142,6:142:5425:6:230:0,-23.873,-467.177 0/1:100:90,10:90:3458:10:383:-4.72241,0,-281.248 0/0:382:380,2:380:14519:2:73:0,-108.062,-1298.69 0/0:385:381,2:381:14527:2:76:0,-108.435,-1299.6 dDocent_Contig_7104 26 . T C 23509.2 . AB=0.283688;ABP=518.758;AC=10;AF=0.833334;AN=12;AO=360;CIGAR=6M1X;DP=1269;DPB=908.429;DPRA=0;EPP=776.079;EPPR=565.422;GTI=0;LEN=1;MEANALT=2.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.5;PAIREDR=0.949807;PAO=0;PQA=0;PQR=0;PRO=0;QA=14433;QR=10192;RO=259;RPL=2;RPP=767.465;RPPR=565.422;RPR=358;RUN=1;SAF=359;SAP=776.079;SAR=1;SRF=259;SRP=565.422;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:221:25,142,54:25:993:142,54:5571,2129:-543.889,-93.38,-132.384,-376.282,0,-441.777 1|1:294:45,144,97:45:1781:144,97:5633,3876:-622.085,-172.647,-275.877,-316.407,0,-433.787 0|1:289:80,138,71:80:3160:138,71:5457,2881:-424.948,0,-218.47,-211.429,-22.4096,-450.073 1|1:317:64,161,81:64:2480:161,81:6350,3265:-568.568,-65.4241,-220.659,-318.715,0,-498.036 0|1:64:22,14,28:22:859:14,28:557,1106:-84.3753,-45.1357,-111.527,0,-24.7389,-62.1743 1|1:84:23,32,29:23:919:32,29:1263,1176:-118.278,-21.2889,-87.3496,-28.2173,0,-95.1858 dDocent_Contig_7105 40 . A T 35.6298 . AB=0.0993377;ABP=424.103;AC=1;AF=0.0833333;AN=12;AO=86;CIGAR=1X;DP=2525;DPB=2525;DPRA=0.94121;EPP=189.757;EPPR=5288.37;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.997124;PAO=0;PQA=0;PQR=0;PRO=0;QA=3104;QR=94766;RO=2434;RPL=0;RPP=189.757;RPPR=5288.37;RPR=86;RUN=1;SAF=86;SAP=189.757;SAR=0;SRF=2434;SRP=5288.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:302:272,30:272:10686:30:1060:-4.78471,0,-870.201 0/0:369:362,5:362:14078:5:186:0,-93.5481,-1249.1 0/0:420:390,30:390:15218:30:1108:0,-26.4144,-1268.55 0/0:378:376,0:376:14624:0:0:0,-113.187,-1314.8 0/0:558:537,21:537:20827:21:750:0,-100.158,-1805.12 0/0:498:497,0:497:19333:0:0:0,-149.612,-1738.19 dDocent_Contig_7106 26 . A G 174.608 . AB=0.105932;ABP=321.333;AC=1;AF=0.0833333;AN=12;AO=58;CIGAR=1X;DP=1566;DPB=1566;DPRA=1.34286;EPP=128.956;EPPR=3277.59;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999337;PAO=0;PQA=0;PQR=0;PRO=0;QA=2323;QR=59652;RO=1508;RPL=0;RPP=128.956;RPPR=3277.59;RPR=58;RUN=1;SAF=58;SAP=128.956;SAR=0;SRF=1508;SRP=3277.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:203:203,0:203:8007:0:0:0,-61.1091,-720.216 0/1:236:211,25:211:8383:25:997:-18.9836,0,-682.963 0/0:245:244,1:244:9650:1:38:0,-69.9551,-864.111 0/0:211:203,8:203:7987:8:325:0,-33.8977,-688.806 0/0:366:365,1:365:14457:1:41:0,-106.082,-1295.97 0/0:305:282,23:282:11168:23:922:0,-8.53004,-921.102 dDocent_Contig_7107 31 . G A 3516.02 . AB=0.314031;ABP=137.888;AC=6;AF=0.5;AN=12;AO=141;CIGAR=1X;DP=449;DPB=449;DPRA=0;EPP=309.188;EPPR=671.824;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5513;QR=12337;RO=308;RPL=0;RPP=309.188;RPPR=671.824;RPR=141;RUN=1;SAF=141;SAP=309.188;SAR=0;SRF=308;SRP=671.824;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:69:41,28:41:1627:28:1087:-77.3382,0,-125.888 0/1:127:86,41:86:3470:41:1578:-104.02,0,-274.097 0/1:52:37,15:37:1495:15:590:-37.7855,0,-119.137 0/1:81:47,34:47:1874:34:1350:-97.3829,0,-144.483 0/1:40:28,12:28:1120:12:478:-31.3292,0,-89.0386 0/1:80:69,11:69:2751:11:430:-14.9681,0,-223.614 dDocent_Contig_7108 13 . G T 1504.03 . AB=0.278689;ABP=184.666;AC=4;AF=0.333333;AN=12;AO=120;CIGAR=1X;DP=840;DPB=840;DPRA=0.5;EPP=263.587;EPPR=1564.3;GTI=0;LEN=1;MEANALT=1.2;MQM=27.4;MQMR=59.6189;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0166667;PAIREDR=0.849791;PAO=0;PQA=0;PQR=0;PRO=0;QA=4700;QR=28631;RO=719;RPL=0;RPP=263.587;RPPR=1564.3;RPR=120;RUN=1;SAF=120;SAP=263.587;SAR=0;SRF=719;SRP=1564.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:98:63,35:63:2499:35:1378:-54.6665,0,-194.838 0/1:115:83,32:83:3311:32:1268:-42.5673,0,-263.426 0/1:120:91,29:91:3661:29:1143:-33.5901,0,-293.355 0/1:94:70,23:70:2805:23:901:-26.801,0,-224.182 0/0:240:240,0:240:9518:0:0:0,-72.2472,-855.745 0/0:173:172,1:172:6837:1:10:0,-51.0782,-613.936 dDocent_Contig_7109 47 . C G 420.578 . AB=0.23;ABP=66.3304;AC=4;AF=0.333333;AN=12;AO=23;CIGAR=1X;DP=149;DPB=149;DPRA=1.02041;EPP=52.9542;EPPR=276.616;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.869565;PAIREDR=0.928571;PAO=0;PQA=0;PQR=0;PRO=0;QA=866;QR=4888;RO=126;RPL=0;RPP=52.9542;RPPR=276.616;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=126;SRP=276.616;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:18:11,7:11:416:7:269:-19.1546,0,-32.3621 0/0:30:30,0:30:1174:0:0:0,-9.0309,-105.947 0/0:19:19,0:19:743:0:0:0,-5.71957,-67.1974 0/1:23:19,4:19:732:4:155:-7.40104,0,-59.2811 0/1:38:31,7:31:1208:7:264:-12.6794,0,-97.5704 0/1:21:16,5:16:615:5:178:-10.0445,0,-49.3666 dDocent_Contig_7110 10 . A T 3259.04 . AB=0.200252;ABP=622.662;AC=3;AF=0.25;AN=12;AO=190;CIGAR=1X;DP=1501;DPB=1501;DPRA=0;EPP=415.59;EPPR=2828.1;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7547;QR=51718;RO=1301;RPL=0;RPP=415.59;RPPR=2828.1;RPR=190;RUN=1;SAF=190;SAP=415.59;SAR=0;SRF=1301;SRP=2828.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:162:157,5:157:6222:5:200:0,-30.3873,-541.371 0/1:480:420,54:420:16648:54:2132:-49.0096,0,-1353.98 0/0:220:205,11:205:8212:11:437:0,-25.7423,-698.943 0/0:325:310,15:310:12343:15:606:0,-42.9561,-1055.14 0/1:120:109,11:109:4329:11:411:-1.19902,0,-353.442 0/1:194:100,94:100:3964:94:3761:-280.105,0,-298.351 dDocent_Contig_7111 27 . A T 14115.3 . AB=0.10241;ABP=686.789;AC=1;AF=0.0833333;AN=12;AO=51;CIGAR=9M1X4M1X1M;DP=1044;DPB=1006.69;DPRA=0;EPP=113.755;EPPR=954.115;GTI=0;LEN=1;MEANALT=6.25;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1931;QR=16997;RO=438;RPL=0;RPP=113.755;RPPR=954.115;RPR=51;RUN=1;SAF=51;SAP=113.755;SAR=0;SRF=438;SRP=954.115;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:106:63,19,3,17,0,0:63:2431:19,3,17,0,0:740,120,632,0,0:-41.859,0,-193.918,-50.9373,-189.752,-249.667,-9.12344,-147.934,-198.866,-203.634,-60.8239,-199.638,-250.571,-208.752,-260.456,-60.8239,-199.638,-250.571,-208.752,-260.456,-260.456 0|0:113:70,12,6,14,0,7:70:2719:12,6,14,0,7:450,237,502,0,263:-19.8488,-4.07168,-223.873,-21.4145,-207.982,-243.022,0,-186.562,-203.905,-219.194,-40.9209,-227.485,-244.829,-223.408,-264.332,-19.3815,-205.947,-223.29,-201.87,-242.794,-240.687 0|0:192:124,10,8,17,1,30:124:4829:10,8,17,1,30:403,310,635,38,1194:-60.992,-65.1003,-458.968,-72.8518,-436.511,-467.32,-46.3398,-409.996,-417.745,-438.096,-95.2033,-458.862,-466.612,-440.097,-491.778,0,-363.666,-371.416,-344.901,-393.767,-387.853 0|0:87:59,10,3,4,0,9:59:2294:10,3,4,0,9:338,108,159,0,362:-12.0906,-2.48045,-187.99,-21.0422,-182.192,-208.668,-16.7546,-177.909,-196.479,-204.084,-29.8514,-191,-209.571,-205.288,-218.38,0,-161.165,-179.735,-175.452,-188.544,-185.835 0|0:370:65,0,0,0,291,5:65:2533:0,0,0,291,5:0,0,0,11505,190:-927.182,-946.749,-1154.94,-946.749,-1154.94,-1154.94,-946.749,-1154.94,-1154.94,-1154.94,0,-208.229,-208.229,-208.229,-120.629,-931.171,-1139.36,-1139.36,-1139.36,-192.651,-1137.85 0|0:176:57,0,0,1,116,0:57:2191:0,0,1,116,0:0,0,41,4592,0:-360.775,-377.934,-557.785,-377.934,-557.785,-557.785,-374.55,-554.401,-554.401,-554.1,0,-179.88,-179.88,-176.496,-144.961,-377.934,-557.785,-557.785,-554.401,-179.88,-557.785 dDocent_Contig_7112 12 . T A 85314.7 . AB=0.705651;ABP=1407.02;AC=6;AF=0.5;AN=12;AO=2697;CIGAR=1X;DP=3822;DPB=3822;DPRA=0;EPP=5859.47;EPPR=2443.75;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.6648;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.989989;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=108003;QR=45116;RO=1124;RPL=0;RPP=5859.47;RPPR=2443.75;RPR=2697;RUN=1;SAF=2697;SAP=5859.47;SAR=0;SRF=1124;SRP=2443.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:580:150,430:150:6028:430:17270:-1376.19,0,-367.683 0/1:751:122,629:122:4893:629:25136:-2031.11,0,-214.184 0/1:430:55,375:55:2195:375:14993:-1213.5,0,-68.2762 0/1:614:143,470:143:5731:470:18855:-1510.35,0,-330.958 0/1:717:295,422:295:11851:422:16945:-1303.25,0,-849.873 0/1:730:359,371:359:14418:371:14804:-1108.3,0,-1076.73 dDocent_Contig_7113 11 . T C 37782.1 . AB=0.489254;ABP=5.39041;AC=8;AF=0.666667;AN=12;AO=1161;CIGAR=1X1M;DP=2373;DPB=2373;DPRA=0;EPP=2524.09;EPPR=1088.75;GTI=0;LEN=1;MEANALT=3.16667;MQM=59.9974;MQMR=60;NS=6;NUMALT=3;ODDS=4.44089e-16;PAIRED=0.993109;PAIREDR=0.998;PAO=0;PQA=0;PQR=0;PRO=0;QA=46304;QR=19800;RO=500;RPL=0;RPP=2524.09;RPPR=1088.75;RPR=1161;RUN=1;SAF=1161;SAP=2524.09;SAR=0;SRF=500;SRP=1088.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:302:67,43,39,153:67:2668:43,39,153:1700,1532,6052:-477.847,-358.131,-564.873,-372.02,-451.821,-579.965,0,-79.8023,-93.6915,-173.63 0|1:490:122,86,86,196:122:4841:86,86,196:3392,3410,7817:-606.995,-364.666,-737.256,-363.04,-482.463,-735.63,0,-119.424,-117.798,-339.478 0|1:269:75,51,26,117:75:2963:51,26,117:2039,1033,4701:-364.784,-219.411,-447.851,-302.321,-378.163,-538.287,0,-75.8407,-158.752,-208.572 0|1:421:92,83,52,194:92:3646:83,52,194:3275,2071,7759:-611.411,-369.663,-644.754,-468.579,-499.212,-753.001,0,-30.6343,-129.549,-241.677 1|1:531:83,106,35,306:83:3282:106,35,306:4228,1394,12129:-1051.37,-728.169,-966.333,-961.569,-883.457,-1221.11,-78.1134,0,-233.401,-256.071 1|1:360:61,76,28,195:61:2400:76,28,195:2993,1093,7846:-677.026,-449.196,-623.722,-605.547,-556.759,-794.523,-48.789,0,-156.353,-187.495 dDocent_Contig_7114 16 . T G 157.845 . AB=0.157143;ABP=74.4828;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=181;DPB=181;DPRA=1.26126;EPP=26.8965;EPPR=372.161;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=437;QR=6823;RO=170;RPL=0;RPP=26.8965;RPPR=372.161;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=170;SRP=372.161;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:972:0:0:0,-7.22472,-87.7775 0/0:29:29,0:29:1155:0:0:0,-8.72987,-104.228 0/0:36:36,0:36:1440:0:0:0,-10.8371,-129.845 0/0:22:22,0:22:881:0:0:0,-6.62266,-79.601 0/1:43:37,6:37:1490:6:235:-8.57208,0,-121.4 0/1:27:22,5:22:885:5:202:-10.4343,0,-71.8296 dDocent_Contig_7115 10 . A G 169.837 . AB=0.0894632;ABP=1475.72;AC=1;AF=0.0833333;AN=12;AO=128;CIGAR=1X;DP=5193;DPB=5193;DPRA=1.23331;EPP=280.959;EPPR=11001.5;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5005;QR=201093;RO=5065;RPL=0;RPP=280.959;RPPR=11001.5;RPR=128;RUN=1;SAF=128;SAP=280.959;SAR=0;SRF=5065;SRP=11001.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:745:745,0:745:29437:0:0:0,-224.267,-2646.77 0/0:792:783,9:783:31092:9:342:0,-207.284,-2764.43 0/0:753:753,0:753:30021:0:0:0,-226.676,-2699.22 0/0:807:790,17:790:31419:17:638:0,-185.202,-2767.21 0/0:1090:1078,12:1078:42801:12:455:0,-286.843,-3806.89 0/1:1006:916,90:916:36323:90:3570:-18.5066,0,-2962.97 dDocent_Contig_7116 13 . C G 664.017 . AB=0.0190114;ABP=531.504;AC=0;AF=0;AN=12;AO=10;CIGAR=7M1X;DP=490;DPB=482.625;DPRA=0.699083;EPP=24.725;EPPR=912.857;GTI=0;LEN=1;MEANALT=2.4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.98568;PAO=0;PQA=0;PQR=0;PRO=0;QA=396;QR=16219;RO=419;RPL=0;RPP=24.725;RPPR=912.857;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=419;SRP=912.857;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:72:63,4,4:63:2419:4,4:152,162:0,-6.48305,-203.879,-5.57068,-191.723,-202.985 0|0:81:69,11,1:69:2676:11,1:407,41:-12.4844,0,-216.525,-29.8681,-216.452,-249.441 0|0:46:42,3,1:42:1630:3,1:115,38:0,-3.20201,-136.232,-9.52757,-134.019,-143.157 0|0:85:72,9,3:72:2783:9,3:338,116:-6.03149,0,-225.905,-18.1741,-219.088,-245.873 0|0:97:72,24,1:72:2794:24,1:912,39:-53.1077,0,-222.341,-71.5756,-226.36,-300.848 0|0:109:101,8,0:101:3917:8,0:302,0:0,-5.27395,-325.068,-30.404,-327.476,-352.228 dDocent_Contig_7117 134 . A G 205.325 . AB=0.230769;ABP=35.7494;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=373;DPB=373;DPRA=1.1686;EPP=42.0968;EPPR=773.883;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=614;QR=12241;RO=355;RPL=0;RPP=42.0968;RPPR=773.883;RPR=18;RUN=1;SAF=0;SAP=42.0968;SAR=18;SRF=0;SRP=773.883;SRR=355;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:52:40,12:40:1407:12:412:-21.7544,0,-111.27 0/0:79:79,0:79:2689:0:0:0,-23.7814,-242.256 0/0:97:95,2:95:3286:2:69:0,-22.6476,-289.405 0/0:52:48,4:48:1693:4:133:0,-3.35464,-140.356 0/0:49:49,0:49:1656:0:0:0,-14.7505,-149.32 0/0:44:44,0:44:1510:0:0:0,-13.2453,-136.187 dDocent_Contig_7118 11 . T C 437.543 . AB=0.147982;ABP=243.031;AC=1;AF=0.0833333;AN=12;AO=56;CIGAR=1X;DP=1684;DPB=1684;DPRA=0.746067;EPP=124.613;EPPR=3538.17;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.964286;PAIREDR=0.992015;PAO=0;PQA=0;PQR=0;PRO=0;QA=2162;QR=64985;RO=1628;RPL=0;RPP=124.613;RPPR=3538.17;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=1628;SRP=3538.17;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:122:120,2:120:4796:2:82:0,-28.946,-423.771 0/1:223:190,33:190:7551:33:1246:-45.2772,0,-612.082 0/0:234:228,6:228:9177:6:240:0,-48.4656,-803.372 0/0:218:204,14:204:8174:14:553:0,-15.5123,-685.097 0/0:531:530,1:530:21148:1:41:0,-155.752,-1897.44 0/0:356:356,0:356:14139:0:0:0,-107.167,-1271.48 dDocent_Contig_7120 98 . N T 91.4447 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=90;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:74:-6.90474,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:6:-0.599999,-0.30103,0 1/1:1:0,1:0:0:1:10:-0.999996,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_7121 118 . T C 70.9462 . AB=0.333333;ABP=5.9056;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=219;DPB=219;DPRA=0.412903;EPP=16.0391;EPPR=465.534;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=189;QR=7227;RO=213;RPL=0;RPP=16.0391;RPPR=465.534;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=465.534;SRR=213;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:8,4:8:269:4:129:-8.31647,0,-20.9253 0/0:24:23,1:23:793:1:35:0,-3.72609,-68.19 0/0:28:28,0:28:966:0:0:0,-8.42884,-87.2536 0/0:28:27,1:27:933:1:25:0,-5.92898,-81.7847 0/0:66:66,0:66:2209:0:0:0,-19.868,-199.077 0/0:61:61,0:61:2057:0:0:0,-18.3628,-185.401 dDocent_Contig_7122 150 . G C 500.254 . AB=0.23301;ABP=66.7841;AC=3;AF=0.25;AN=12;AO=27;CIGAR=1X;DP=200;DPB=200;DPRA=1.46667;EPP=61.6401;EPPR=376.504;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.703704;PAIREDR=0.784884;PAO=0;PQA=0;PQR=0;PRO=0;QA=1037;QR=6625;RO=172;RPL=27;RPP=61.6401;RPPR=376.504;RPR=0;RUN=1;SAF=0;SAP=61.6401;SAR=27;SRF=0;SRP=376.504;SRR=172;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:929:0:0:0,-7.22472,-83.9262 0/0:30:28,2:28:1070:2:76:0,-1.81623,-89.391 0/1:24:22,2:22:834:2:77:-0.0844219,0,-68.1537 0/1:45:32,12:32:1233:12:466:-28.6572,0,-97.6295 0/1:34:24,10:24:934:10:383:-24.5892,0,-74.1407 0/0:43:42,1:42:1625:1:35:0,-9.44566,-143.015 dDocent_Contig_7123 28 . A C 131.3 . AB=0.108844;ABP=198.369;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=695;DPB=695;DPRA=1.34124;EPP=37.7539;EPPR=1468.75;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=652;QR=27049;RO=675;RPL=0;RPP=37.7539;RPPR=1468.75;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=675;SRP=1468.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:81:81,0:81:3253:0:0:0,-24.3834,-292.826 0/0:151:151,0:151:6039:0:0:0,-45.4555,-543.27 0/0:88:86,0:86:3430:0:0:0,-25.8886,-308.325 0/1:147:130,16:130:5179:16:652:-14.6529,0,-421.594 0/0:145:144,0:144:5782:0:0:0,-43.3483,-519.757 0/0:83:83,0:83:3366:0:0:0,-24.9855,-302.972 dDocent_Contig_7124 30 . T G 38112.3 . AB=0.696224;ABP=587.613;AC=6;AF=0.5;AN=12;AO=1217;CIGAR=1X;DP=1748;DPB=1748;DPRA=0;EPP=2645.69;EPPR=1156.06;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=48347;QR=21324;RO=531;RPL=0;RPP=2645.69;RPPR=1156.06;RPR=1217;RUN=1;SAF=1217;SAP=2645.69;SAR=0;SRF=531;SRP=1156.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:243:73,170:73:2959:170:6772:-536.03,0,-193.235 0/1:336:80,256:80:3194:256:10214:-817.454,0,-186.376 0/1:149:35,114:35:1391:114:4500:-360.076,0,-80.5865 0/1:285:82,203:82:3281:203:8086:-641.514,0,-209.549 0/1:370:150,220:150:6015:220:8745:-675.165,0,-429.715 0/1:365:111,254:111:4484:254:10030:-792.218,0,-293.603 dDocent_Contig_7125 28 . G A 3387.33 . AB=0.121029;ABP=3301.3;AC=3;AF=0.25;AN=12;AO=412;CIGAR=1X;DP=5454;DPB=5454;DPRA=0;EPP=897.657;EPPR=10949.4;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999603;PAO=0;PQA=0;PQR=0;PRO=0;QA=16302;QR=199058;RO=5041;RPL=0;RPP=897.657;RPPR=10949.4;RPR=412;RUN=1;SAF=412;SAP=897.657;SAR=0;SRF=5041;SRP=10949.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:828:749,79:749:29523:79:3125:-32.0809,0,-2405.26 0/1:978:866,112:866:34152:112:4451:-106.132,0,-2776.24 0/1:838:709,129:709:28027:129:5090:-205.742,0,-2267.71 0/0:882:814,68:814:32191:68:2682:0,-23.9934,-2652.79 0/0:1079:1057,21:1057:41748:21:831:0,-249.799,-3678.41 0/0:849:846,3:846:33417:3:123:0,-244.11,-2993.06 dDocent_Contig_7126 98 . N G 20998.5 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=743;CIGAR=1X;DP=745;DPB=745;DPRA=0;EPP=1616.41;EPPR=0;GTI=0;LEN=1;MEANALT=1.33333;MQM=59.9542;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=23317;QR=0;RO=0;RPL=743;RPP=1616.41;RPPR=0;RPR=0;RUN=1;SAF=743;SAP=1616.41;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:129:0,128:0:0:128:4047:-364.375,-38.5318,0 1/1:108:0,108:0:0:108:3290:-296.327,-32.5112,0 1/1:90:0,89:0:0:89:2810:-253.075,-26.7917,0 1/1:112:0,112:0:0:112:3478:-312.549,-33.7154,0 1/1:100:0,100:0:0:100:3164:-284.997,-30.103,0 1/1:206:0,206:0:0:206:6528:-587.681,-62.0122,0 dDocent_Contig_7128 20 . T C 49799 . AB=0.814002;ABP=1642.17;AC=6;AF=0.5;AN=12;AO=1558;CIGAR=1X;DP=1914;DPB=1914;DPRA=0;EPP=3386.16;EPPR=769.54;GTI=0;LEN=1;MEANALT=1.5;MQM=59.9827;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.831194;PAIREDR=0.997167;PAO=0;PQA=0;PQR=0;PRO=0;QA=61907;QR=14200;RO=353;RPL=0;RPP=3386.16;RPPR=769.54;RPR=1558;RUN=1;SAF=1558;SAP=3386.16;SAR=0;SRF=353;SRP=769.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:231:41,189:41:1647:189:7510:-605.866,0,-78.807 0/1:351:67,284:67:2679:284:11311:-911.554,0,-135.566 0/1:193:28,165:28:1140:165:6453:-522.391,0,-44.7785 0/1:320:47,273:47:1866:273:10885:-882.155,0,-71.8189 0/1:448:92,355:92:3740:355:14154:-1138.06,0,-201.833 0/1:371:78,292:78:3128:292:11594:-931.097,0,-170.016 dDocent_Contig_7129 90 . T A 450.92 . AB=0.150769;ABP=347.299;AC=4;AF=0.333333;AN=12;AO=72;CIGAR=1X;DP=622;DPB=622;DPRA=0;EPP=159.356;EPPR=1195.15;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.958333;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2434;QR=18440;RO=549;RPL=72;RPP=159.356;RPPR=1195.15;RPR=0;RUN=1;SAF=72;SAP=159.356;SAR=0;SRF=549;SRP=1195.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:68:54,13:54:1776:13:442:-19.6252,0,-139.639 0/1:96:85,11:85:2886:11:362:-3.9999,0,-231.089 0/1:106:92,14:92:3023:14:474:-11.0741,0,-240.401 0/1:55:44,11:44:1492:11:376:-17.6132,0,-118.017 0/0:145:131,14:131:4438:14:481:0,-0.0315867,-356.005 0/0:152:143,9:143:4825:9:299:0,-18.5235,-407.204 dDocent_Contig_7130 17 . T A 114676 . AB=0.883789;ABP=4351.63;AC=7;AF=0.583333;AN=12;AO=3561;CIGAR=1X;DP=4004;DPB=4004;DPRA=0;EPP=7735.62;EPPR=960.63;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=140897;QR=17300;RO=441;RPL=0;RPP=7735.62;RPPR=960.63;RPR=3561;RUN=1;SAF=3561;SAP=7735.62;SAR=0;SRF=441;SRP=960.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:611:66,545:66:2582:545:21572:-1755.78,0,-48.5992 1/1:605:48,557:48:1879:557:22046:-1813.01,-12.8008,0 0/1:481:66,414:66:2574:414:16375:-1327.91,0,-87.2153 0/1:625:82,543:82:3201:543:21526:-1747.43,0,-100.034 0/1:882:99,782:99:3917:782:30877:-2510.81,0,-87.0918 0/1:800:80,720:80:3147:720:28501:-2321.84,0,-42.4804 dDocent_Contig_7131 108 . A G 77.9996 . AB=0.206897;ABP=24.6501;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=160;DPB=160;DPRA=0.83908;EPP=20.3821;EPPR=326.56;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=256;QR=3875;RO=149;RPL=0;RPP=20.3821;RPPR=326.56;RPR=8;RUN=1;SAF=0;SAP=20.3821;SAR=8;SRF=0;SRP=326.56;SRR=149;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:716:0:0:0,-8.12781,-64.697 0/0:29:28,1:28:739:1:34:0,-5.33096,-63.3643 0/0:35:34,0:34:914:0:0:0,-10.235,-82.4397 0/0:25:24,0:24:591:0:0:0,-7.22472,-53.3542 0/0:15:13,1:13:334:1:25:0,-1.87455,-27.8905 0/1:29:23,6:23:581:6:197:-9.32283,0,-43.8072 dDocent_Contig_7132 63 . A T 561.745 . AB=0.240741;ABP=66.0634;AC=1;AF=0.0833333;AN=12;AO=27;CIGAR=1X;DP=544;DPB=544;DPRA=1.62667;EPP=61.6401;EPPR=1125.66;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1039;QR=20179;RO=517;RPL=27;RPP=61.6401;RPPR=1125.66;RPR=0;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=517;SRP=1125.66;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:69:69,0:69:2709:0:0:0,-20.7711,-243.945 0/0:89:89,0:89:3462:0:0:0,-26.7917,-311.646 0/0:46:46,0:46:1794:0:0:0,-13.8474,-161.676 0/0:96:96,0:96:3769:0:0:0,-28.8989,-339.243 0/1:108:82,26:82:3179:26:999:-57.6974,0,-253.678 0/0:136:135,1:135:5266:1:40:0,-36.9444,-469.83 dDocent_Contig_7133 47 . A G 265.997 . AB=0.261905;ABP=23.691;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=176;DPB=176;DPRA=1.56716;EPP=26.8965;EPPR=327.402;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.5818;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.830303;PAO=0;PQA=0;PQR=0;PRO=0;QA=449;QR=6531;RO=165;RPL=0;RPP=26.8965;RPPR=361.303;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=161;SRP=327.402;SRR=4;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:817:0:0:0,-6.32163,-73.8425 0/0:29:29,0:29:1140:0:0:0,-8.72987,-102.885 0/1:42:31,11:31:1235:11:449:-28.1226,0,-98.7748 0/0:35:35,0:35:1391:0:0:0,-10.536,-125.181 0/0:25:25,0:25:996:0:0:0,-7.52575,-89.9396 0/0:24:24,0:24:952:0:0:0,-7.22472,-85.0021 dDocent_Contig_7134 20 . G A 101318 . AB=0.756435;ABP=2399.65;AC=6;AF=0.5;AN=12;AO=3174;CIGAR=1X1M;DP=4196;DPB=4196;DPRA=0;EPP=6895.26;EPPR=1939.96;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=126446;QR=35609;RO=892;RPL=0;RPP=6895.26;RPPR=1939.96;RPR=3174;RUN=1;SAF=3174;SAP=6895.26;SAR=0;SRF=892;SRP=1939.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:591:115,7,469:115:4541:7,469:271,18621:-1498.18,-1510.54,-1882.05,0,-351.364,-232.438 0|1:696:156,14,526:156:6218:14,526:555,21050:-1687,-1688.28,-2196.09,0,-466.353,-353.692 0|1:653:111,77,464:111:4416:77,464:3105,18538:-1493.38,-1270.86,-1611.26,0,-107.637,-223.899 0|1:672:149,12,510:149:5982:12,510:483,20295:-1626.07,-1631.12,-2120.41,0,-453.113,-339.395 0|1:806:205,16,584:205:8198:16,584:631,23206:-1848.65,-1858.45,-2528.89,0,-623.347,-499.456 0|1:778:156,0,621:156:6254:0,621:0,24736:-1989.74,-2036.7,-2551.96,0,-515.253,-328.313 dDocent_Contig_7135 13 . C G 83.0674 . AB=0.11;ABP=135.123;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=2M2X;DP=332;DPB=332;DPRA=1.128;EPP=42.0968;EPPR=658.795;GTI=0;LEN=1;MEANALT=1.6;MQM=28.4444;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0.748344;PAO=0;PQA=0;PQR=0;PRO=0;QA=714;QR=11929;RO=302;RPL=0;RPP=42.0968;RPPR=658.795;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=302;SRP=658.795;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:50:47,0,0,3:47:1859:0,0,3:0,0,121:0,-14.1484,-167.121,-14.1484,-167.121,-167.121,-3.7713,-157.146,-157.146,-156.243 0|0:76:72,0,2,2:72:2863:0,2,2:0,79,82:0,-21.6742,-257.447,-17.5322,-253.238,-252.635,-14.835,-250.678,-246.469,-250.076 0|0:47:44,0,3,0:44:1752:0,3,0:0,120,0:0,-13.2453,-157.62,-6.64874,-151.299,-150.396,-13.2453,-157.62,-151.299,-157.62 0|0:47:41,0,2,4:41:1601:0,2,4:0,78,153:-0.326915,-12.6691,-144.319,-9.57443,-141.174,-140.572,0,-131.765,-128.621,-130.561 0|1:53:41,3,9,0:41:1600:3,9,0:117,365,0:-9.82809,-12.5324,-143.204,0,-121.89,-128.798,-22.1703,-144.107,-131.507,-153.725 0|0:59:57,0,2,0:57:2254:0,2,0:0,72,0:0,-17.1587,-202.787,-13.0207,-198.903,-198.301,-17.1587,-202.787,-198.903,-202.787 dDocent_Contig_7136 34 . G C 974.314 . AB=0.30303;ABP=47.4926;AC=3;AF=0.25;AN=12;AO=40;CIGAR=1X;DP=263;DPB=263;DPRA=1.00763;EPP=89.8692;EPPR=487.249;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1571;QR=8851;RO=223;RPL=0;RPP=89.8692;RPPR=487.249;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=223;SRP=487.249;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1206:0:0:0,-9.0309,-108.812 0/1:50:32,18:32:1281:18:728:-50.7929,0,-100.507 0/1:49:43,6:43:1689:6:226:-5.94663,0,-137.493 0/1:33:17,16:17:672:16:617:-45.9138,0,-50.8763 0/0:46:46,0:46:1823:0:0:0,-13.8474,-164.278 0/0:55:55,0:55:2180:0:0:0,-16.5566,-196.379 dDocent_Contig_7137 33 . G A 511.724 . AB=0.154545;ABP=231.054;AC=1;AF=0.0833333;AN=12;AO=61;CIGAR=1X;DP=1805;DPB=1805;DPRA=0.496137;EPP=135.47;EPPR=3062.12;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.869191;PAO=0;PQA=0;PQR=0;PRO=0;QA=2382;QR=68157;RO=1743;RPL=0;RPP=135.47;RPPR=3787.89;RPR=61;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=1655;SRP=3062.12;SRR=88;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:220:186,34:186:7204:34:1315:-52.3942,0,-581.867 0/0:218:208,10:208:8055:10:403:0,-28.995,-687.986 0/0:228:216,12:216:8494:12:470:0,-25.9877,-721.392 0/0:233:228,5:228:8855:5:194:0,-52.3091,-778.725 0/0:503:503,0:503:19764:0:0:0,-151.418,-1777.28 0/0:403:402,0:402:15785:0:0:0,-121.014,-1419.14 dDocent_Contig_7138 18 . T C 25030.6 . AB=0.0394036;ABP=3463.61;AC=0;AF=0;AN=12;AO=74;CIGAR=2X;DP=1878;DPB=1878;DPRA=0;EPP=163.699;EPPR=2068.08;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.972973;PAIREDR=0.997897;PAO=0;PQA=0;PQR=0;PRO=0;QA=2903;QR=38131;RO=951;RPL=0;RPP=163.699;RPPR=2068.08;RPR=74;RUN=1;SAF=74;SAP=163.699;SAR=0;SRF=951;SRP=2068.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:244:144,11,89:144:5765:11,89:409,3585:-252.146,-262.031,-733.619,0,-441.462,-448.135 0|0:278:145,4,128:145:5794:4,128:162,5133:-379.244,-409.535,-885.542,0,-463.849,-438.675 0|0:114:44,10,60:44:1750:10,60:393,2403:-184.707,-165.631,-306.688,0,-111.751,-126.011 0|0:167:61,1,105:61:2445:1,105:39,4179:-325.709,-340.866,-541.996,0,-198.234,-169.832 0|0:609:313,38,257:313:12571:38,257:1504,10295:-753.854,-724.297,-1748.69,0,-912.056,-958.472 0|0:466:244,10,210:244:9806:10,210:396,8402:-618.617,-659.475,-1464.51,0,-775.456,-744.834 dDocent_Contig_7139 40 . T C 13665.9 . AB=0.312802;ABP=507.065;AC=2;AF=0.166667;AN=12;AO=643;CIGAR=1X;DP=4633;DPB=4633;DPRA=0;EPP=1399.27;EPPR=8660.67;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=25733;QR=159850;RO=3987;RPL=0;RPP=1399.27;RPPR=8660.67;RPR=643;RUN=1;SAF=643;SAP=1399.27;SAR=0;SRF=3987;SRP=8660.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:763:735,28:735:29590:28:1125:0,-128.153,-2558.78 0/0:850:838,11:838:33589:11:397:0,-219.819,-2983.76 0/0:621:572,49:572:22871:49:1944:0,-11.7809,-1881.17 0/0:743:706,37:706:28301:37:1494:0,-88.9632,-2409.78 0/1:934:659,274:659:26446:274:10987:-706.841,0,-2096.49 0/1:722:477,244:477:19053:244:9786:-662.97,0,-1496.01 dDocent_Contig_7140 21 . G T 528.398 . AB=0.142405;ABP=353.992;AC=2;AF=0.166667;AN=12;AO=82;CIGAR=1X;DP=1554;DPB=1554;DPRA=0;EPP=181.071;EPPR=3195.07;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.981633;PAO=0;PQA=0;PQR=0;PRO=0;QA=3031;QR=58069;RO=1470;RPL=0;RPP=181.071;RPPR=3195.07;RPR=82;RUN=1;SAF=82;SAP=181.071;SAR=0;SRF=1470;SRP=3195.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:244:242,1:242:9505:1:37:0,-69.8322,-851.172 0/0:471:458,12:458:18041:12:458:0,-100.324,-1580.68 0/0:336:324,12:324:12872:12:419:0,-63.1101,-1119.51 0/1:282:244,38:244:9639:38:1425:-43.6356,0,-782.039 0/0:187:175,12:175:6930:12:444:0,-15.9963,-583.086 0/1:34:27,7:27:1082:7:248:-12.426,0,-87.4333 dDocent_Contig_7141 44 . C T 117447 . AB=0.0552659;ABP=6593.14;AC=0;AF=0;AN=12;AO=212;CIGAR=1M1I3M1X1M;DP=4772;DPB=5436.33;DPRA=0.819658;EPP=463.362;EPPR=1551.27;GTI=0;LEN=1;MEANALT=6.6;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8419;QR=28161;RO=713;RPL=0;RPP=463.362;RPPR=1551.27;RPR=212;RUN=1;SAF=212;SAP=463.362;SAR=0;SRF=713;SRP=1551.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:715:166,23,505:166:6543:23,505:910,19546:-1555.34,-1530.42,-2061.78,0,-463.397,-386.268 0|0:796:120,99,568:120:4735:99,568:3912,22066:-1776.76,-1490.98,-1850.76,0,-67.6826,-218.601 0|0:690:108,48,502:108:4288:48,502:1926,19560:-1574.87,-1448.69,-1787.23,0,-194.3,-201.875 0|0:714:131,41,521:131:5122:41,521:1631,20240:-1623.42,-1528.56,-1937.3,0,-286.787,-264.239 0|0:936:70,0,860:70:2784:0,860:0,33493:-2760.95,-2782.02,-3011.23,-29.5369,-258.886,0 0|0:921:118,1,779:118:4689:1,779:40,30394:-2462.58,-2494.81,-2880.53,0,-382.731,-151.524 dDocent_Contig_7142 20 . G A 80.2866 . AB=0.118421;ABP=99.1265;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=540;DPB=540;DPRA=0.818966;EPP=22.5536;EPPR=1156.06;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.984934;PAO=0;PQA=0;PQR=0;PRO=0;QA=353;QR=21082;RO=531;RPL=0;RPP=22.5536;RPPR=1156.06;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=531;SRP=1156.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:76:67,9:67:2692:9:353:-9.2505,0,-219.519 0/0:109:109,0:109:4316:0:0:0,-32.8123,-388.397 0/0:55:55,0:55:2200:0:0:0,-16.5566,-198.168 0/0:82:82,0:82:3240:0:0:0,-24.6845,-291.666 0/0:110:110,0:110:4354:0:0:0,-33.1133,-391.815 0/0:108:108,0:108:4280:0:0:0,-32.5112,-385.156 dDocent_Contig_7143 15 . G A 826.535 . AB=0.115337;ABP=1050.46;AC=3;AF=0.25;AN=12;AO=114;CIGAR=1X;DP=1818;DPB=1818;DPRA=1.03673;EPP=250.558;EPPR=3703.2;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.993545;PAO=0;PQA=0;PQR=0;PRO=0;QA=4443;QR=65656;RO=1704;RPL=0;RPP=250.558;RPPR=3703.2;RPR=114;RUN=1;SAF=114;SAP=250.558;SAR=0;SRF=1704;SRP=3703.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:256:234,22:234:9033:22:855:-0.194692,0,-735.507 0/1:359:318,41:318:12183:41:1594:-35.6384,0,-987.735 0/1:200:169,31:169:6455:31:1224:-50.2359,0,-520.577 0/0:327:311,16:311:11994:16:614:0,-42.8411,-1023.21 0/0:382:378,4:378:14547:4:156:0,-100.576,-1293.93 0/0:294:294,0:294:11444:0:0:0,-88.5028,-1029.31 dDocent_Contig_7144 107 . N A 97.0363 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=104;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:104:-9.70309,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_7145 8 . A C 9842.08 . AB=0.483703;ABP=4.77975;AC=6;AF=0.5;AN=12;AO=371;CIGAR=1X;DP=767;DPB=767;DPRA=0;EPP=808.627;EPPR=860.742;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.997305;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13612;QR=15141;RO=395;RPL=0;RPP=808.627;RPPR=860.742;RPR=371;RUN=1;SAF=371;SAP=808.627;SAR=0;SRF=395;SRP=860.742;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:136:86,50:86:3293:50:1845:-125.354,0,-255.576 0/1:187:64,122:64:2457:122:4553:-353.46,0,-164.954 0/1:101:44,57:44:1701:57:2128:-161.348,0,-122.944 0/1:172:88,84:88:3368:84:3105:-227.842,0,-251.483 0/1:64:48,16:48:1835:16:586:-33.8059,0,-146.136 0/1:107:65,42:65:2487:42:1395:-93.6194,0,-191.82 dDocent_Contig_7146 43 . A G 321.183 . AB=0.135266;ABP=242.197;AC=1;AF=0.0833333;AN=12;AO=60;CIGAR=1X;DP=1735;DPB=1735;DPRA=1.23154;EPP=133.299;EPPR=3638.06;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2330;QR=66486;RO=1674;RPL=0;RPP=133.299;RPPR=3638.06;RPR=60;RUN=1;SAF=60;SAP=133.299;SAR=0;SRF=1674;SRP=3638.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:298:287,10:287:11348:10:396:0,-53.5286,-984.621 0/0:336:333,3:333:13207:3:121:0,-89.8659,-1176.43 0/0:393:374,19:374:14909:19:750:0,-50.4854,-1272.84 0/0:297:297,0:297:11775:0:0:0,-89.4059,-1058.96 0/0:204:204,0:204:8154:0:0:0,-61.4101,-733.418 0/1:207:179,28:179:7093:28:1063:-33.6412,0,-575.735 dDocent_Contig_7147 19 . C T 63.0204 . AB=0.108108;ABP=101.724;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=364;DPB=364;DPRA=1.11111;EPP=24.725;EPPR=771.712;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.985876;PAO=0;PQA=0;PQR=0;PRO=0;QA=408;QR=14244;RO=354;RPL=0;RPP=24.725;RPPR=771.712;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=354;SRP=771.712;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:74:66,8:66:2624:8:327:-7.52389,0,-213.998 0/0:56:54,2:54:2189:2:81:0,-9.17195,-189.484 0/0:57:57,0:57:2310:0:0:0,-17.1587,-208.049 0/0:52:52,0:52:2090:0:0:0,-15.6536,-188.274 0/0:80:80,0:80:3220:0:0:0,-24.0824,-289.853 0/0:45:45,0:45:1811:0:0:0,-13.5463,-163.192 dDocent_Contig_7148 14 . A G 156.261 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=13;CIGAR=2M1X14M;DP=1038;DPB=978.941;DPRA=1.04483;EPP=31.2394;EPPR=1770.59;GTI=0;LEN=1;MEANALT=7;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.998771;PAO=0;PQA=0;PQR=0;PRO=0;QA=510;QR=31830;RO=814;RPL=0;RPP=31.2394;RPPR=1770.59;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=814;SRP=1770.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:147:113,0,0:113:4410:0,0:0,0:0,-34.0164,-396.534,-34.0164,-396.534,-396.534 0|0:158:121,0,0:121:4707:0,0:0,0:0,-36.4246,-423.238,-36.4246,-423.238,-423.238 0|0:70:56,6,0:56:2200:6,0:229,0:-1.93646,0,-179.16,-18.7941,-180.967,-199.753 0|0:186:142,19,0:142:5568:19,0:729,0:-17.0905,0,-452.184,-59.8368,-457.903,-517.737 0|0:275:227,0,0:227:8906:0,0:0,0:0,-68.3338,-800.767,-68.3338,-800.767,-800.767 0|0:202:155,0,13:155:6039:0,13:0,510:0,-46.6596,-542.994,-4.72071,-501.057,-497.144 dDocent_Contig_7150 29 . A G 61.4639 . AB=0.25;ABP=9.52472;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=146;DPB=146;DPRA=0.827273;EPP=22.5536;EPPR=300.502;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.555556;PAIREDR=0.686131;PAO=0;PQA=0;PQR=0;PRO=0;QA=365;QR=5460;RO=137;RPL=0;RPP=22.5536;RPPR=300.502;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=137;SRP=300.502;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:35,3:35:1414:3:122:0,-0.066647,-116.138 0/0:14:13,1:13:528:1:41:0,-0.119853,-43.7719 0/1:12:9,3:9:365:3:121:-7.66784,0,-29.6027 0/0:24:24,0:24:940:0:0:0,-7.22472,-84.8906 0/0:27:25,2:25:976:2:81:0,-0.442076,-80.4542 0/0:31:31,0:31:1237:0:0:0,-9.33193,-111.603 dDocent_Contig_7151 24 . T A 25991.4 . AB=0.438974;ABP=66.0877;AC=5;AF=0.416667;AN=12;AO=856;CIGAR=1M1X7M;DP=1950;DPB=1936.33;DPRA=0;EPP=1861.79;EPPR=1840.08;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.996454;PAO=0;PQA=0;PQR=0;PRO=0;QA=34131;QR=33170;RO=846;RPL=0;RPP=1861.79;RPPR=1840.08;RPR=856;RUN=1;SAF=856;SAP=1861.79;SAR=0;SRF=846;SRP=1840.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:180:98,25,31,11,14:98:3852:25,31,11,14:994,1229,448,567:-71.6581,-19.3189,-328.625,0,-234.991,-307.5,-64.1996,-299.192,-279.873,-377.721,-54.405,-289.398,-270.078,-334.279,-367.024 0|1:282:103,0,68,0,110:103:4059:0,68,0,110:0,2599,0,4417:-332.957,-363.963,-697.903,-150.757,-484.694,-464.224,-363.963,-697.903,-484.694,-697.903,0,-333.947,-120.739,-333.947,-300.834 0|1:157:44,28,10,0,74:44:1735:28,10,0,74:1118,342,0,2925:-227.434,-148.596,-282.915,-212.942,-263.605,-352.677,-240.679,-291.344,-355.687,-383.426,0,-50.6652,-115.015,-142.751,-120.475 0|1:249:190,7,11,0,39:190:7477:7,11,0,39:278,421,0,1554:-70.7756,-105.084,-718.033,-93.4304,-685.598,-705.173,-127.971,-720.141,-708.485,-743.027,0,-592.179,-580.523,-615.066,-603.326 0|1:626:229,0,0,0,368:229:8944:0,0,0,368:0,0,0,14652:-1137.46,-1206.39,-1941.63,-1206.39,-1941.63,-1941.63,-1206.39,-1941.63,-1941.63,-1941.63,0,-735.241,-735.241,-735.241,-624.462 0|1:456:182,0,1,0,251:182:7103:0,1,0,251:0,41,0,10016:-770.084,-824.872,-1408.72,-821.488,-1405.33,-1405.03,-824.872,-1408.72,-1405.33,-1408.72,0,-583.867,-580.483,-583.867,-508.308 dDocent_Contig_7152 14 . G C 13927 . AB=0.202206;ABP=2517.19;AC=6;AF=0.5;AN=12;AO=660;CIGAR=3M1X1M;DP=3264;DPB=3220.6;DPRA=0;EPP=1436.18;EPPR=5166.77;GTI=0;LEN=1;MEANALT=3.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.998318;PAO=0;PQA=0;PQR=0;PRO=0;QA=25785;QR=90848;RO=2378;RPL=0;RPP=1436.18;RPPR=5166.77;RPR=660;RUN=1;SAF=660;SAP=1436.18;SAR=0;SRF=2378;SRP=5166.77;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:565:438,62,63:438:16677:62,63:2202,2425:-67.2513,-19.7091,-1368.91,0,-1188.49,-1348.93 0|1:637:494,23,118:494:18986:23,118:826,4618:-230.991,-312.331,-1863.97,0,-1491.22,-1523.07 0|1:318:248,19,49:248:9522:19,49:685,1943:-85.302,-104.07,-879.945,0,-725.731,-766.875 0|1:597:489,33,74:489:18584:33,74:1162,2931:-94.0632,-146.691,-1660.75,0,-1429.44,-1501.76 0|1:506:273,65,166:273:10426:65,166:2227,6502:-452.463,-353.9,-1189.73,0,-674.682,-805.461 0|1:641:436,14,190:436:16653:14,190:507,7366:-473.849,-563.709,-1925.77,0,-1324.91,-1309.1 dDocent_Contig_7153 13 . T C 10338.3 . AB=0.10582;ABP=768.23;AC=0;AF=0;AN=12;AO=60;CIGAR=1X1M1X;DP=801;DPB=801;DPRA=0;EPP=133.299;EPPR=839.027;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2321;QR=14910;RO=385;RPL=0;RPP=133.299;RPPR=839.027;RPR=60;RUN=1;SAF=60;SAP=133.299;SAR=0;SRF=385;SRP=839.027;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:310:191,55,63:191:7395:55,63:2123,2485:-146.947,-30.1084,-620.989,0,-433.107,-588.479 0|0:179:26,4,149:26:992:4,149:158,5921:-479.633,-474.458,-554.628,0,-68.3615,-36.5116 0|0:78:47,1,30:47:1829:1,30:40,1195:-84.2411,-95.0944,-245.097,0,-147.003,-141.267 0|0:85:64,0,21:64:2481:0,21:0,831:-49.5171,-68.783,-272.602,0,-204.212,-197.89 0|0:108:22,0,86:22:861:0,86:0,3413:-274.718,-281.34,-352.133,0,-71.1849,-45.2963 0|0:41:35,0,6:35:1352:0,6:0,244:-9.99659,-20.5326,-131.552,0,-111.422,-109.616 dDocent_Contig_7154 18 . A T 4900.65 . AB=0.337456;ABP=132.9;AC=6;AF=0.5;AN=12;AO=191;CIGAR=3X;DP=566;DPB=566;DPRA=0;EPP=417.762;EPPR=812.97;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.919571;PAO=0;PQA=0;PQR=0;PRO=0;QA=7443;QR=14517;RO=373;RPL=0;RPP=417.762;RPPR=812.97;RPR=191;RUN=1;SAF=191;SAP=417.762;SAR=0;SRF=373;SRP=812.97;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:59:39,19:39:1512:19:747:-50.0024,0,-118.797 0|1:80:64,15:64:2489:15:578:-28.1783,0,-200.007 0|1:83:63,20:63:2458:20:771:-44.7218,0,-196.411 0|1:97:73,24:73:2855:24:942:-55.8894,0,-227.894 0|1:126:64,62:64:2507:62:2427:-180.68,0,-187.877 0|1:121:70,51:70:2696:51:1978:-141.815,0,-206.382 dDocent_Contig_7155 21 . T A 4302.05 . AB=0.0271003;ABP=719.779;AC=0;AF=0;AN=12;AO=10;CIGAR=9M1X7M;DP=719;DPB=651.235;DPRA=0;EPP=24.725;EPPR=923.715;GTI=0;LEN=1;MEANALT=5.66667;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.962264;PAO=0;PQA=0;PQR=0;PRO=0;QA=391;QR=15756;RO=424;RPL=0;RPP=24.725;RPPR=923.715;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=424;SRP=923.715;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:113:65,24,8,15,0,0:65:2400:24,8,15,0,0:938,256,528,0,0:-57.5758,0,-189.095,-56.5261,-175.699,-250.412,-34.165,-153.339,-209.84,-225.946,-77.1428,-196.32,-252.82,-230.462,-273.442,-77.1428,-196.32,-252.82,-230.462,-273.442,-273.442 0|0:129:66,47,3,10,0,1:66:2475:47,3,10,0,1:1802,97,334,0,40:-128.038,0,-188.608,-140.083,-194.933,-341.91,-120.873,-175.721,-315.777,-320.591,-147.905,-202.756,-342.813,-323.601,-350.637,-144.61,-199.461,-339.518,-320.306,-347.342,-347.041 0|0:86:68,8,0,4,0,0:68:2545:8,0,4,0,0:303,0,117,0,0:-4.38704,0,-206.043,-24.8571,-208.451,-233.291,-15.5537,-199.134,-223.973,-222.769,-24.8571,-208.451,-233.291,-223.973,-233.291,-24.8571,-208.451,-233.291,-223.973,-233.291,-233.291 0|0:151:73,60,6,12,0,0:73:2701:60,6,12,0,0:2324,160,397,0,0:-168.4,0,-202.945,-177.792,-208.421,-396.941,-158.277,-188.905,-366.645,-375.62,-190.376,-221.007,-398.747,-379.233,-411.335,-190.376,-221.007,-398.747,-379.233,-411.335,-411.335 0|0:125:74,20,0,0,22,8:74:2753:20,0,0,22,8:784,0,0,866,310:-48.967,-6.76875,-226.066,-71.2432,-232.086,-296.561,-71.2432,-232.086,-296.561,-296.561,0,-160.842,-225.318,-225.318,-218.696,-45.7763,-206.618,-271.093,-271.093,-199.85,-268.685 0|0:115:78,18,3,0,9,1:78:2882:18,3,0,9,1:700,94,0,359,41:-34.0584,0,-230.327,-49.9889,-228.193,-284.814,-57.5388,-235.746,-285.718,-293.271,-27.9654,-206.178,-256.151,-263.704,-260.995,-54.1536,-232.361,-282.333,-289.887,-260.32,-289.586 dDocent_Contig_7156 27 . A G 99.981 . AB=0.123457;ABP=102.764;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=3M1X;DP=324;DPB=323;DPRA=1.19212;EPP=31.2394;EPPR=667.481;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.461538;PAIREDR=0.624183;PAO=0;PQA=0;PQR=0;PRO=0;QA=517;QR=12051;RO=306;RPL=0;RPP=31.2394;RPPR=667.481;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=306;SRP=667.481;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:39:39,0,0:39:1551:0,0:0,0:0,-11.7402,-139.837,-11.7402,-139.837,-139.837 0|0:61:60,0,0:60:2355:0,0:0,0:0,-18.0618,-211.772,-18.0618,-211.772,-211.772 0|0:49:49,0,0:49:1954:0,0:0,0:0,-14.7505,-176.062,-14.7505,-176.062,-176.062 0|0:54:52,0,0:52:2021:0,0:0,0:0,-15.6536,-181.694,-15.6536,-181.694,-181.694 0|0:40:35,2,3:35:1390:2,3:76,122:0,-4.3136,-118.132,-0.456947,-108.67,-113.999 0|1:81:71,0,10:71:2780:0,10:0,395:-11.5207,-32.8939,-261.467,0,-228.967,-225.957 dDocent_Contig_7157 26 . T C 5694.21 . AB=0.166667;ABP=60.9162;AC=0;AF=0;AN=12;AO=10;CIGAR=1X3M1X;DP=463;DPB=463;DPRA=0;EPP=24.725;EPPR=541.535;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.991935;PAO=0;PQA=0;PQR=0;PRO=0;QA=397;QR=9652;RO=248;RPL=0;RPP=24.725;RPPR=541.535;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=248;SRP=541.535;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:70:30,0,39:30:1170:0,39:0,1522:-116.039,-125.07,-221.241,0,-96.1615,-84.4213 0|0:92:43,0,49:43:1650:0,49:0,1958:-148.721,-161.665,-297.07,0,-135.795,-121.045 0|0:73:40,0,33:40:1555:0,33:0,1303:-95.5468,-107.588,-235.357,0,-128.16,-118.226 0|0:85:46,0,39:46:1805:0,39:0,1569:-115.854,-129.702,-278.138,0,-148.834,-137.094 0|0:83:57,0,24:57:2242:0,24:0,941:-60.2102,-77.3689,-261.789,0,-184.418,-177.193 0|0:60:32,10,16:32:1230:10,16:397,653:-44.2718,-21.217,-119.175,0,-68.2962,-96.168 dDocent_Contig_7158 46 . A C 966.449 . AB=0.177852;ABP=271.632;AC=2;AF=0.166667;AN=12;AO=59;CIGAR=1X;DP=916;DPB=916;DPRA=0.86558;EPP=122.589;EPPR=1846.63;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.98133;PAO=0;PQA=0;PQR=0;PRO=0;QA=2344;QR=33448;RO=857;RPL=1;RPP=122.589;RPPR=1846.63;RPR=58;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=857;SRP=1863.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:127:121,6:121:4710:6:244:0,-15.892,-401.522 0/0:185:185,0:185:7248:0:0:0,-55.6905,-652.039 0/0:114:114,0:114:4482:0:0:0,-34.3174,-403.357 0/0:192:192,0:192:7463:0:0:0,-57.7978,-671.383 0/1:137:117,20:117:4548:20:796:-30.7152,0,-368.069 0/1:161:128,33:128:4997:33:1304:-69.1515,0,-401.203 dDocent_Contig_7159 128 . G A 47.994 . AB=0.181818;ABP=22.3561;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=163;DPB=163;DPRA=0.780142;EPP=11.6962;EPPR=348.274;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.893082;PAO=0;PQA=0;PQR=0;PRO=0;QA=140;QR=5515;RO=159;RPL=0;RPP=11.6962;RPPR=348.274;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=348.274;SRR=159;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:943:0:0:0,-8.12781,-85.1863 0/0:23:23,0:23:791:0:0:0,-6.92369,-71.5077 0/0:38:38,0:38:1314:0:0:0,-11.4391,-118.561 0/0:43:43,0:43:1491:0:0:0,-12.9443,-134.486 0/0:10:10,0:10:348:0:0:0,-3.0103,-31.656 0/1:22:18,4:18:628:4:140:-6.32227,0,-50.2244 dDocent_Contig_7160 16 . T C 977.075 . AB=0.138182;ABP=628.41;AC=4;AF=0.333333;AN=12;AO=78;CIGAR=1X;DP=762;DPB=762;DPRA=1.07;EPP=172.385;EPPR=1488.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994152;PAO=0;PQA=0;PQR=0;PRO=0;QA=3071;QR=26607;RO=684;RPL=0;RPP=172.385;RPPR=1488.3;RPR=78;RUN=1;SAF=78;SAP=172.385;SAR=0;SRF=684;SRP=1488.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:143:126,17:126:4869:17:677:-18.2159,0,-395.151 0/1:135:119,16:119:4649:16:621:-15.5889,0,-377.76 0/0:92:90,2:90:3501:2:80:0,-20.103,-307.601 0/1:105:89,16:89:3473:16:635:-25.8777,0,-281.057 0/0:120:120,0:120:4661:0:0:0,-36.1236,-419.491 0/1:167:140,27:140:5454:27:1058:-45.2469,0,-440.516 dDocent_Contig_7161 27 . T C 259.913 . AB=0.185185;ABP=72.7387;AC=3;AF=0.25;AN=12;AO=25;CIGAR=1X;DP=398;DPB=398;DPRA=0;EPP=57.2971;EPPR=810.798;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.84;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=996;QR=14930;RO=372;RPL=0;RPP=57.2971;RPPR=810.798;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=372;SRP=810.798;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:16,5:16:645:5:198:-11.8754,0,-52.0621 0/0:88:85,3:85:3403:3:121:0,-15.2104,-295.036 0/1:9:8,1:8:305:1:41:-1.3853,0,-25.0883 0/1:51:42,9:42:1669:9:359:-17.3206,0,-135.077 0/0:148:141,6:141:5672:6:236:0,-23.0478,-488.656 0/0:81:80,1:80:3236:1:41:0,-20.2889,-287.195 dDocent_Contig_7162 19 . G A 44954.5 . AB=0.830961;ABP=1607.09;AC=6;AF=0.5;AN=12;AO=1401;CIGAR=1X;DP=1686;DPB=1686;DPRA=0;EPP=3045.24;EPPR=621.88;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=55750;QR=11306;RO=285;RPL=0;RPP=3045.24;RPPR=621.88;RPR=1401;RUN=1;SAF=1401;SAP=3045.24;SAR=0;SRF=285;SRP=621.88;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:224:40,184:40:1608:184:7298:-589.057,0,-77.5224 0/1:298:79,219:79:3161:219:8807:-702.396,0,-194.857 0/1:188:55,133:55:2169:133:5270:-417.567,0,-138.797 0/1:315:52,263:52:2066:263:10413:-841.705,0,-91.3021 0/1:299:27,272:27:1051:272:10812:-882.369,0,-4.87499 0/1:362:32,330:32:1251:330:13150:-1073.58,0,-3.88512 dDocent_Contig_7163 12 . G A 13875.8 . AB=0.271293;ABP=723.124;AC=3;AF=0.25;AN=12;AO=430;CIGAR=6M1X2M1X1M1X;DP=1585;DPB=1590.33;DPRA=0;EPP=936.743;EPPR=1473.1;GTI=0;LEN=1;MEANALT=8;MQM=54.3023;MQMR=60;NS=6;NUMALT=3;ODDS=2.22045e-16;PAIRED=0.995349;PAIREDR=0.98966;PAO=0;PQA=0;PQR=0;PRO=0;QA=17025;QR=26392;RO=677;RPL=0;RPP=936.743;RPPR=1473.1;RPR=430;RUN=1;SAF=430;SAP=936.743;SAR=0;SRF=677;SRP=1473.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:234:85,57,84,0:85:3323:57,84,0:2267,3301,0:-245.917,-88.0323,-344.084,0,-89.7436,-247.929,-271.504,-361.243,-273.216,-544.711 0|1:366:139,127,83,0:139:5423:127,83,0:5030,3301,0:-364.415,0,-407.551,-134.481,-174.006,-555.277,-406.258,-445.782,-580.262,-852.034 0|0:227:76,66,77,0:76:2973:66,77,0:2625,3070,0:-229.947,-38.0928,-262.67,0,-29.7132,-221.27,-252.826,-282.538,-244.449,-497.267 0|1:363:178,106,61,0:178:6951:106,61,0:4179,2401,0:-286.818,0,-539.532,-142.896,-373.94,-695.966,-340.401,-571.441,-714.329,-911.829 0|0:182:108,6,37,20:108:4192:6,37,20:234,1414,759:-83.5145,-96.7899,-439.431,0,-325.236,-333.332,-53.7793,-378.999,-282.231,-392.212 0|1:213:91,68,41,2:91:3530:68,41,2:2690,1617,78:-188.186,0,-269.566,-82.5386,-156.998,-360.229,-209.168,-283.624,-366.159,-498.593 dDocent_Contig_7165 107 . N A 1415.98 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=48;CIGAR=1X;DP=48;DPB=48;DPRA=0;EPP=107.241;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1543;QR=0;RO=0;RPL=0;RPP=107.241;RPPR=0;RPR=48;RUN=1;SAF=0;SAP=107.241;SAR=48;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:10:0,10:0:0:10:319:-29.0199,-3.0103,0 1/1:7:0,7:0:0:7:216:-19.7431,-2.10721,0 1/1:9:0,9:0:0:9:308:-28.0527,-2.70927,0 1/1:8:0,8:0:0:8:264:-24.0821,-2.40824,0 1/1:3:0,3:0:0:3:95:-8.86443,-0.90309,0 1/1:11:0,11:0:0:11:341:-30.9903,-3.31133,0 dDocent_Contig_7166 10 . A T 180.279 . AB=0.104839;ABP=339.378;AC=1;AF=0.0833333;AN=12;AO=27;CIGAR=1X;DP=1492;DPB=1492;DPRA=0.969154;EPP=61.6401;EPPR=3177.7;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1078;QR=57907;RO=1462;RPL=0;RPP=61.6401;RPPR=3177.7;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=1462;SRP=3177.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:248:221,26:221:8745:26:1038:-19.2497,0,-712.114 0/0:331:331,0:331:13152:0:0:0,-99.6409,-1182.77 0/0:239:238,1:238:9485:1:40:0,-67.9505,-849.084 0/0:331:330,0:330:13046:0:0:0,-99.3399,-1173.15 0/0:157:156,0:156:6142:0:0:0,-46.9607,-552.178 0/0:186:186,0:186:7337:0:0:0,-55.9916,-660.001 dDocent_Contig_7167 130 . N G 421.214 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=11;CIGAR=1X;DP=11;DPB=11;DPRA=0;EPP=26.8965;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0.727273;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=443;QR=0;RO=0;RPL=11;RPP=26.8965;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:163:-15.0584,-1.20412,0 1/1:4:0,4:0:0:4:163:-15.0584,-1.20412,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:40:-3.99568,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:77:-7.30914,-0.60206,0 dDocent_Contig_7168 12 . C T 254.904 . AB=0.270833;ABP=24.906;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=483;DPB=483;DPRA=1.08626;EPP=42.0968;EPPR=1012.74;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.944444;PAIREDR=0.911828;PAO=0;PQA=0;PQR=0;PRO=0;QA=641;QR=18609;RO=465;RPL=0;RPP=42.0968;RPPR=1012.74;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=465;SRP=1012.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:85:85,0:85:3416:0:0:0,-25.5875,-307.479 0/0:122:117,5:117:4684:5:184:0,-19.8073,-404.548 0/0:101:101,0:101:4051:0:0:0,-30.404,-364.559 0/0:117:117,0:117:4667:0:0:0,-35.2205,-419.949 0/0:10:10,0:10:399:0:0:0,-3.0103,-36.2688 0/1:48:35,13:35:1392:13:457:-27.0133,0,-111.085 dDocent_Contig_7169 70 . T C 2469.6 . AB=0.207178;ABP=459.554;AC=6;AF=0.5;AN=12;AO=127;CIGAR=1X;DP=613;DPB=613;DPRA=0;EPP=278.787;EPPR=1058.35;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.92126;PAIREDR=0.888889;PAO=0;PQA=0;PQR=0;PRO=0;QA=4898;QR=19033;RO=486;RPL=127;RPP=278.787;RPPR=1058.35;RPR=0;RUN=1;SAF=127;SAP=278.787;SAR=0;SRF=486;SRP=1058.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:78:52,26:52:1987:26:976:-64.6691,0,-155.588 0/1:113:88,25:88:3370:25:969:-53.507,0,-269.422 0/1:90:78,12:78:3106:12:470:-15.5515,0,-252.523 0/1:141:113,28:113:4439:28:1093:-56.2068,0,-357.011 0/1:88:67,21:67:2633:21:823:-47.8955,0,-210.617 0/1:103:88,15:88:3498:15:567:-20.352,0,-283.857 dDocent_Contig_7170 40 . G C 244.079 . AB=0.0973282;ABP=740.996;AC=1;AF=0.0833333;AN=12;AO=85;CIGAR=1X;DP=3680;DPB=3680;DPRA=0.426485;EPP=187.585;EPPR=7679.57;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.986618;PAO=0;PQA=0;PQR=0;PRO=0;QA=3395;QR=142803;RO=3587;RPL=0;RPP=187.585;RPPR=7792.08;RPR=85;RUN=1;SAF=85;SAP=187.585;SAR=0;SRF=3574;SRP=7679.57;SRR=13;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:293:285,6:285:11294:6:244:0,-65.6621,-993.346 0/1:524:472,51:472:18841:51:2040:-25.9308,0,-1536.26 0/0:413:399,14:399:15969:14:543:0,-75.1204,-1386.71 0/0:464:450,14:450:17910:14:568:0,-88.2159,-1559 0/0:1059:1057,0:1057:42149:0:0:0,-318.189,-3789 0/0:927:924,0:924:36640:0:0:0,-278.152,-3293.82 dDocent_Contig_7171 126 . C T 4708.79 . AB=0.132244;ABP=793.597;AC=0;AF=0;AN=12;AO=89;CIGAR=1X1M3X2M;DP=673;DPB=673;DPRA=0;EPP=196.271;EPPR=441.648;GTI=0;LEN=1;MEANALT=5.66667;MQM=36.1236;MQMR=59.896;NS=6;NUMALT=4;ODDS=0;PAIRED=0.910112;PAIREDR=0.80198;PAO=0;PQA=0;PQR=0;PRO=0;QA=2834;QR=7194;RO=202;RPL=0;RPP=196.271;RPPR=441.648;RPR=89;RUN=1;SAF=0;SAP=196.271;SAR=89;SRF=0;SRP=441.648;SRR=202;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:92:27,11,7,22,24:27:963:11,7,22,24:396,249,770,880:-63.8141,-41.0708,-116.265,-51.659,-99.2935,-128.057,-12.1085,-59.7421,-70.3299,-83.9893,0,-47.6385,-58.227,-18.675,-71.2855 0|0:104:37,5,6,27,27:37:1319:5,6,27,27:175,221,957,975:-68.4374,-65.8938,-171.908,-61.5015,-155.339,-167.215,-4.63403,-98.469,-94.0771,-104.023,0,-93.8406,-89.4487,-32.5791,-99.3948 0|0:89:31,9,0,18,30:31:1103:9,0,18,30:312,0,652,1088:-79.5144,-64.5119,-151.658,-88.8463,-154.367,-178.703,-38.0608,-103.582,-127.916,-122.498,0,-65.5277,-89.8629,-39.0758,-80.832 0|0:117:34,10,9,37,24:34:1203:10,9,37,24:357,333,1164,872:-79.5525,-61.9253,-156.909,-62.5514,-132.685,-157.837,0,-70.1271,-70.7527,-86.848,-18.5685,-88.7059,-89.3324,-26.7761,-109.343 0|0:112:28,26,5,28,20:28:1016:26,5,28,20:664,178,966,745:-67.1311,-27.257,-102.4,-61.0506,-95.7193,-142.523,0,-34.6852,-68.475,-74.5549,-14.5539,-49.2324,-83.0294,-21.9807,-91.5178 0|0:159:45,28,16,50,17:45:1590:28,16,50,17:930,586,1758,622:-123.652,-65.4149,-186.476,-89.3137,-147.022,-213.99,0,-57.7116,-81.6086,-114.441,-86.3621,-144.07,-167.972,-78.6571,-210.738 dDocent_Contig_7172 51 . T A 130.332 . AB=0.2;ABP=18.6449;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=4M1X;DP=120;DPB=118.4;DPRA=1;EPP=11.6962;EPPR=233.186;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.75;PAIREDR=0.641509;PAO=0;PQA=0;PQR=0;PRO=0;QA=162;QR=4204;RO=106;RPL=0;RPP=11.6962;RPPR=233.186;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=106;SRP=233.186;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:31:29,2,0:29:1148:2,0:78,0:0,-1.92863,-96.2054,-8.72987,-96.8074,-103.219 0|0:13:11,2,0:11:429:2,0:80,0:-3.67819,0,-35.05,-6.98951,-35.6521,-42.2436 0|0:17:17,0,0:17:675:0,0:0,0:0,-5.11751,-61.0815,-5.11751,-61.0815,-61.0815 0|0:27:23,4,0:23:917:4,0:150,0:-5.73645,0,-74.7118,-12.6601,-75.9159,-88.1979 0|0:12:11,0,0:11:438:0,0:0,0:0,-3.31133,-39.3668,-3.31133,-39.3668,-39.3668 0|1:20:15,0,4:15:597:0,4:0,162:-8.83892,-13.3544,-62.5065,0,-49.1469,-47.9428 dDocent_Contig_7173 42 . A T 95.8686 . AB=0.112069;ABP=154.639;AC=2;AF=0.166667;AN=12;AO=25;CIGAR=1X;DP=422;DPB=422;DPRA=1.16129;EPP=57.2971;EPPR=865.085;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.32;PAIREDR=0.43073;PAO=0;PQA=0;PQR=0;PRO=0;QA=999;QR=15751;RO=397;RPL=0;RPP=57.2971;RPPR=865.085;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=397;SRP=865.085;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:56:49,7:49:1937:7:280:-8.71297,0,-157.679 0/0:95:92,3:92:3649:3:122:0,-17.2254,-317.073 0/1:60:54,6:54:2139:6:242:-4.09515,0,-174.633 0/0:78:72,6:72:2879:6:235:0,-1.96052,-237.692 0/0:62:62,0:62:2438:0:0:0,-18.6639,-219.579 0/0:71:68,3:68:2709:3:120:0,-10.1854,-232.744 dDocent_Contig_7174 15 . G C 2660.21 . AB=0.203762;ABP=489.325;AC=5;AF=0.416667;AN=12;AO=136;CIGAR=2X;DP=809;DPB=809;DPRA=0;EPP=298.331;EPPR=1464.41;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995542;PAO=0;PQA=0;PQR=0;PRO=0;QA=5414;QR=26624;RO=673;RPL=0;RPP=298.331;RPPR=1464.41;RPR=136;RUN=1;SAF=136;SAP=298.331;SAR=0;SRF=673;SRP=1464.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:132:105,27:105:4124:27:1053:-55.3175,0,-331.419 0|1:119:100,19:100:4003:19:765:-33.3484,0,-324.443 0|1:75:66,9:66:2624:9:357:-9.91288,0,-213.723 0|1:134:95,39:95:3755:39:1561:-100.391,0,-297.631 0|0:171:165,6:165:6520:6:238:0,-29.6829,-564.762 0|1:178:142,36:142:5598:36:1440:-76.2723,0,-450.086 dDocent_Contig_7176 43 . T A 43.3986 . AB=0.0916905;ABP=508.391;AC=1;AF=0.0833333;AN=12;AO=107;CIGAR=1X;DP=2764;DPB=2764;DPRA=0;EPP=235.358;EPPR=5750.9;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998867;PAO=0;PQA=0;PQR=0;PRO=0;QA=3981;QR=85306;RO=2647;RPL=0;RPP=235.358;RPPR=5750.9;RPR=107;RUN=1;SAF=107;SAP=235.358;SAR=0;SRF=2647;SRP=5750.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:349:317,32:317:10275:32:1226:-5.56169,0,-819.684 0/0:540:521,18:521:16733:18:692:0,-100.058,-1443.16 0/0:496:466,26:466:15044:26:992:0,-58.695,-1264.25 0/0:402:387,13:387:12545:13:487:0,-76.3896,-1084.83 0/0:502:485,15:485:15471:15:557:0,-100.249,-1341.79 0/0:475:471,3:471:15238:3:27:0,-140.258,-1368.73 dDocent_Contig_7177 209 . N G 245.759 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=256;QR=0;RO=0;RPL=7;RPP=18.2106;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:15:-1.49999,-0.30103,0 1/1:4:0,4:0:0:4:160:-14.7838,-1.20412,0 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_7179 18 . T C 206.271 . AB=0.204082;ABP=40.2799;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=389;DPB=389;DPRA=0.927536;EPP=46.4397;EPPR=802.112;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.35;PAIREDR=0.997283;PAO=0;PQA=0;PQR=0;PRO=0;QA=799;QR=14659;RO=368;RPL=0;RPP=46.4397;RPPR=802.112;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=368;SRP=802.112;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:49:47,2:47:1874:2:82:0,-6.97079,-161.086 0/1:49:39,10:39:1549:10:406:-22.1499,0,-124.9 0/0:91:89,2:89:3541:2:70:0,-20.7466,-312.071 0/0:63:59,4:59:2383:4:159:0,-4.27314,-199.925 0/0:69:68,0:68:2708:0:0:0,-20.47,-243.722 0/0:68:66,2:66:2604:2:82:0,-12.6904,-226.701 dDocent_Contig_7180 24 . C A 98.1959 . AB=0.119048;ABP=108.895;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=381;DPB=381;DPRA=1.30909;EPP=39.9253;EPPR=793.426;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.882353;PAIREDR=0.815934;PAO=0;PQA=0;PQR=0;PRO=0;QA=680;QR=14679;RO=364;RPL=0;RPP=39.9253;RPPR=793.426;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=364;SRP=793.426;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:54,0:54:2167:0:0:0,-16.2556,-195.204 0/0:52:48,4:48:1916:4:154:0,-1.42414,-158.409 0/0:80:77,3:77:3109:3:123:0,-12.6176,-268.409 0/1:84:74,10:74:2996:10:403:-11.3424,0,-244.425 0/0:60:60,0:60:2418:0:0:0,-18.0618,-217.757 0/0:51:51,0:51:2073:0:0:0,-15.3525,-186.742 dDocent_Contig_7181 50 . C T 383.006 . AB=0.139535;ABP=245.66;AC=2;AF=0.166667;AN=12;AO=45;CIGAR=1X;DP=689;DPB=689;DPRA=0;EPP=100.727;EPPR=1401.44;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.733333;PAIREDR=0.785714;PAO=0;PQA=0;PQR=0;PRO=0;QA=1760;QR=25543;RO=644;RPL=45;RPP=100.727;RPPR=1401.44;RPR=0;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=644;SRP=1401.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:139:122,17:122:4849:17:659:-17.795,0,-394.482 0/0:128:127,1:127:5050:1:31:0,-35.4324,-451.28 0/1:76:63,13:63:2492:13:514:-23.7274,0,-201.531 0/0:136:130,6:130:5150:6:244:0,-18.6015,-441.039 0/0:122:115,7:115:4584:7:271:0,-11.9744,-387.73 0/0:88:87,1:87:3418:1:41:0,-22.3961,-303.575 dDocent_Contig_7182 41 . T G 6825.09 . AB=0.163372;ABP=2443.01;AC=4;AF=0.333333;AN=12;AO=469;CIGAR=1X;DP=4167;DPB=4167;DPRA=0;EPP=1021.43;EPPR=8013.57;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.995736;PAIREDR=0.999188;PAO=0;PQA=0;PQR=0;PRO=0;QA=18484;QR=147366;RO=3693;RPL=0;RPP=1021.43;RPPR=8013.57;RPR=469;RUN=1;SAF=469;SAP=1021.43;SAR=0;SRF=3693;SRP=8022.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:661:538,122:538:21528:122:4809:-233.705,0,-1736.62 0/1:718:582,135:582:23198:135:5291:-259.805,0,-1869.57 0/1:432:394,38:394:15734:38:1493:-4.56588,0,-1284.77 0/1:668:557,110:557:22130:110:4362:-191.655,0,-1788.95 0/0:866:830,34:830:33105:34:1337:0,-139.899,-2855.81 0/0:822:792,30:792:31671:30:1192:0,-139.891,-2739.89 dDocent_Contig_7183 98 . N T 3325.18 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=108;CIGAR=2X;DP=108;DPB=108.5;DPRA=0;EPP=237.529;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=1;PQA=35;PQR=0;PRO=0;QA=3678;QR=0;RO=0;RPL=108;RPP=237.529;RPPR=0;RPR=0;RUN=1;SAF=108;SAP=237.529;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:20:0,20:0:0:20:682:-61.6999,-6.0206,0 1|1:33:0,33:0:0:33:1105:-99.751,-9.93399,0 1|1:16:0,16:0:0:16:546:-49.1146,-4.81648,0 .:.:.:.:.:.:.:. 1|1:39:0,39:0:0:39:1345:-121.35,-11.7402,0 .:.:.:.:.:.:.:. dDocent_Contig_7185 70 . G A 2714.67 . AB=0.16973;ABP=879.395;AC=3;AF=0.25;AN=12;AO=213;CIGAR=1X;DP=1910;DPB=1910;DPRA=0;EPP=465.534;EPPR=3685.83;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99941;PAO=0;PQA=0;PQR=0;PRO=0;QA=8313;QR=65762;RO=1696;RPL=213;RPP=465.534;RPPR=3685.83;RPR=0;RUN=1;SAF=213;SAP=465.534;SAR=0;SRF=1696;SRP=3685.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:306:295,10:295:11370:10:399:0,-55.6356,-986.351 0/0:433:402,31:402:15468:31:1207:0,-21.441,-1282.2 0/1:317:282,35:282:11036:35:1375:-28.579,0,-897.138 0/1:353:308,45:308:12000:45:1728:-49.474,0,-972.991 0/1:255:178,77:178:6943:77:3059:-198.636,0,-547.843 0/0:246:231,15:231:8945:15:545:0,-24.6804,-755.228 dDocent_Contig_7186 45 . T A 3682.59 . AB=0.345882;ABP=90.6918;AC=5;AF=0.416667;AN=12;AO=150;CIGAR=2X;DP=496;DPB=496;DPRA=0;EPP=328.731;EPPR=747.825;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.74;PAIREDR=0.688047;PAO=0;PQA=0;PQR=0;PRO=0;QA=5711;QR=11719;RO=343;RPL=0;RPP=328.731;RPPR=747.825;RPR=150;RUN=1;SAF=150;SAP=328.731;SAR=0;SRF=343;SRP=747.825;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:82:35,47:35:1183:47:1777:-135.481,0,-82.0776 0|1:90:60,30:60:2087:30:1140:-75.7956,0,-161 0|1:82:64,18:64:2237:18:665:-35.4816,0,-176.901 0|1:69:38,31:38:1263:31:1204:-87.8667,0,-93.1866 0|0:71:67,3:67:2250:3:115:0,-10.7127,-192.037 0|1:102:79,21:79:2699:21:810:-42.8561,0,-212.812 dDocent_Contig_7187 32 . A G 3570.59 . AB=0.160767;ABP=1358.42;AC=4;AF=0.333333;AN=12;AO=258;CIGAR=1X;DP=2172;DPB=2172;DPRA=0;EPP=563.25;EPPR=4154.87;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10156;QR=76293;RO=1912;RPL=0;RPP=563.25;RPPR=4154.87;RPR=258;RUN=1;SAF=258;SAP=563.25;SAR=0;SRF=1912;SRP=4154.87;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:329:282,46:282:11265:46:1798:-63.1576,0,-914.226 0/1:425:328,97:328:13086:97:3784:-212.653,0,-1048.84 0/1:280:254,25:254:10137:25:987:-5.02963,0,-827.577 0/0:501:474,27:474:18869:27:1073:0,-53.958,-1599.79 0/1:322:272,50:272:10846:50:2002:-83.4401,0,-878.491 0/0:315:302,13:302:12090:13:512:0,-48.4023,-1040.81 dDocent_Contig_7188 7 . A C 1122.13 . AB=0.217557;ABP=184.552;AC=5;AF=0.416667;AN=12;AO=60;CIGAR=1X;DP=299;DPB=299;DPRA=0;EPP=133.299;EPPR=521.992;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.433333;PAIREDR=0.543933;PAO=0;PQA=0;PQR=0;PRO=0;QA=2299;QR=9098;RO=239;RPL=0;RPP=133.299;RPPR=521.992;RPR=60;RUN=1;SAF=60;SAP=133.299;SAR=0;SRF=239;SRP=521.992;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:45,9:45:1712:9:347:-15.3336,0,-138.083 0/1:72:48,24:48:1847:24:931:-62.4323,0,-144.805 0/1:33:28,5:28:1055:5:193:-7.8075,0,-85.318 0/1:59:45,14:45:1714:14:542:-31.365,0,-136.76 0/0:37:34,3:34:1287:3:93:0,-2.46219,-107.445 0/1:44:39,5:39:1483:5:193:-4.49604,0,-120.5 dDocent_Contig_7189 9 . A G 1339.45 . AB=0.205128;ABP=150.281;AC=4;AF=0.333333;AN=12;AO=41;CIGAR=1X4M;DP=358;DPB=358;DPRA=0.553684;EPP=92.0407;EPPR=593.651;GTI=0;LEN=1;MEANALT=2.4;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1564;QR=10603;RO=272;RPL=0;RPP=92.0407;RPPR=593.651;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=272;SRP=593.651;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:53:30,19,1,3:30:1150:19,1,3:720,38,111:-49.9991,0,-88.6699,-55.9134,-91.273,-149.996,-49.9508,-85.3103,-141.217,-143.43 0|1:28:18,2,0,7:18:703:2,0,7:78,0,266:-16.3893,-15.3945,-72.591,-21.8078,-73.1931,-79.6048,0,-51.3811,-57.7926,-55.6854 0|1:42:25,0,0,17:25:979:0,0,17:0,0,661:-47.1839,-54.7097,-135.211,-54.7097,-135.211,-135.211,0,-80.8913,-80.8913,-75.7738 0|1:72:42,3,12,13:42:1648:3,12,13:118,464,491:-27.5941,-30.5297,-165.169,-2.12593,-127.962,-134.057,0,-125.832,-97.4298,-131.625 0|0:95:90,0,5,0:90:3515:0,5,0:0,199,0:0,-27.0927,-316.043,-10.3089,-299.656,-298.151,-27.0927,-316.043,-299.656,-316.043 0|0:68:67,0,0,1:67:2608:0,0,1:0,0,35:0,-20.169,-234.541,-20.169,-234.541,-234.541,-16.9714,-231.694,-231.694,-231.393 dDocent_Contig_7190 11 . C T 330.552 . AB=0.12892;ABP=346.277;AC=2;AF=0.166667;AN=12;AO=37;CIGAR=1X;DP=733;DPB=733;DPRA=1.287;EPP=83.3548;EPPR=1514.36;GTI=0;LEN=1;MEANALT=1;MQM=43.5676;MQMR=57.6782;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.961207;PAO=0;PQA=0;PQR=0;PRO=0;QA=1461;QR=27881;RO=696;RPL=0;RPP=83.3548;RPPR=1514.36;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=696;SRP=1514.36;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:95:95,0:95:3781:0:0:0,-28.5978,-336.325 0/0:141:141,0:141:5664:0:0:0,-42.4452,-509.347 0/0:89:89,0:89:3579:0:0:0,-26.7917,-320.344 0/0:121:121,0:121:4882:0:0:0,-36.4246,-437.314 0/1:139:122,17:122:4870:17:679:-11.8687,0,-395.505 0/1:148:128,20:128:5105:20:782:-24.4084,0,-413.788 dDocent_Contig_7191 17 . T G 45945 . AB=0.28714;ABP=1343.45;AC=3;AF=0.25;AN=12;AO=978;CIGAR=2M1X1M;DP=3406;DPB=2813.5;DPRA=0;EPP=2126.71;EPPR=2341.69;GTI=0;LEN=1;MEANALT=3.33333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.986708;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=39000;QR=42630;RO=1077;RPL=0;RPP=2126.71;RPPR=2341.69;RPR=978;RUN=1;SAF=978;SAP=2126.71;SAR=0;SRF=1077;SRP=2341.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:516:215,176,32,92:215:8512:176,32,92:6292,1255,3692:-448.194,0,-647.559,-409.716,-597.343,-1100.64,-208.704,-396.34,-806.065,-881.568 0|0:613:321,175,32,85:321:12657:175,32,85:6321,1280,3426:-419.174,0,-988.605,-410.366,-935.849,-1442.03,-233.405,-758.894,-1169.28,-1249.12 0|0:397:186,123,10,77:186:7426:123,10,77:4478,399,3069:-309.694,0,-574.58,-332.827,-578.748,-941.433,-112.951,-358.883,-691.717,-701.396 0|1:590:191,138,88,172:191:7533:138,88,172:5122,3448,6883:-509.492,-147.892,-726.1,-283.493,-484.148,-876.757,0,-200.66,-336.262,-567.981 0|1:678:66,288,1,323:66:2627:288,1,323:10476,27,12810:-1673.72,-838.09,-967.696,-1691.46,-1052.26,-1907.46,-639.177,0,-853.357,-758.252 0|1:612:98,285,0,229:98:3875:285,0,229:10326,0,9120:-1245.45,-432.075,-665.157,-1274.95,-750.951,-1593.83,-523.987,0,-842.872,-773.936 dDocent_Contig_7192 69 . T C 16578.7 . AB=0.303326;ABP=760.637;AC=4;AF=0.333333;AN=12;AO=713;CIGAR=1X;DP=3397;DPB=3397;DPRA=0;EPP=1551.27;EPPR=5820.38;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=27145;QR=101780;RO=2679;RPL=713;RPP=1551.27;RPPR=5820.38;RPR=0;RUN=1;SAF=713;SAP=1551.27;SAR=0;SRF=2679;SRP=5820.38;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:642:427,215:427:16179:215:8146:-539.663,0,-1262.08 0/1:673:514,158:514:19489:158:6046:-341.558,0,-1550.49 0/1:545:313,230:313:11961:230:8746:-623.349,0,-912.444 0/1:395:314,81:314:11911:81:3103:-160.518,0,-952.617 0/0:516:500,15:500:18992:15:581:0,-102.787,-1655.66 0/0:626:611,14:611:23248:14:523:0,-141.029,-2043.62 dDocent_Contig_7193 41 . C T 182.464 . AB=0.108225;ABP=310.974;AC=1;AF=0.0833333;AN=12;AO=56;CIGAR=1X;DP=1420;DPB=1420;DPRA=1.21498;EPP=124.613;EPPR=2962.73;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998533;PAO=0;PQA=0;PQR=0;PRO=0;QA=2180;QR=54355;RO=1363;RPL=0;RPP=124.613;RPPR=2962.73;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=1363;SRP=2962.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:231:217,14:217:8682:14:531:0,-21.4227,-732.759 0/1:231:206,25:206:8220:25:989:-19.7693,0,-669.822 0/0:350:345,4:345:13773:4:164:0,-90.1115,-1223.43 0/0:194:181,13:181:7272:13:496:0,-13.4275,-609.144 0/0:233:233,0:233:9255:0:0:0,-70.14,-832.41 0/0:181:181,0:181:7153:0:0:0,-54.4864,-643.447 dDocent_Contig_7195 63 . A G 100.094 . AB=0.129032;ABP=114.176;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=288;DPB=288;DPRA=1.28571;EPP=33.4109;EPPR=597.994;GTI=0;LEN=1;MEANALT=1;MQM=51.4286;MQMR=52.9927;NS=6;NUMALT=1;ODDS=0;PAIRED=0.857143;PAIREDR=0.711679;PAO=0;PQA=0;PQR=0;PRO=0;QA=532;QR=10347;RO=274;RPL=8;RPP=3.63072;RPPR=56.2985;RPR=6;RUN=1;SAF=8;SAP=3.63072;SAR=6;SRF=178;SRP=56.2985;SRR=96;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:69:67,2:67:2503:2:76:0,-13.6696,-215.968 0/0:33:33,0:33:1270:0:0:0,-9.93399,-113.218 0/1:35:29,6:29:1122:6:227:-9.93029,0,-89.5907 0/1:58:52,6:52:1934:6:229:-3.2973,0,-154.968 0/0:55:55,0:55:2065:0:0:0,-16.5566,-183.065 0/0:38:38,0:38:1453:0:0:0,-11.4391,-129.186 dDocent_Contig_7196 1 . N G 202.688 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=6;CIGAR=1X4M;DP=6;DPB=33.2;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=6.5;PQA=240.5;PQR=240.5;PRO=6.5;QA=208;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:3:0,3:0:0:3:103:-9.61002,-0.90309,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:70:-6.55714,-0.60206,0 .:.:.:.:.:.:.:. 1|1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_7197 13 . G T 2863.1 . AB=0.156616;ABP=1140.87;AC=4;AF=0.333333;AN=12;AO=174;CIGAR=1X;DP=1348;DPB=1348;DPRA=2.34388;EPP=380.846;EPPR=2552.32;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6968;QR=45730;RO=1174;RPL=0;RPP=380.846;RPPR=2552.32;RPR=174;RUN=1;SAF=174;SAP=380.846;SAR=0;SRF=1174;SRP=2552.32;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:321:282,39:282:10953:39:1558:-43.8243,0,-888.523 0/1:431:365,66:365:14198:66:2635:-107.525,0,-1147.18 0/1:261:209,52:209:8123:52:2097:-110.334,0,-652.14 0/1:98:81,17:81:3139:17:678:-31.8491,0,-253.107 0/0:186:186,0:186:7331:0:0:0,-55.9916,-659.483 0/0:51:51,0:51:1986:0:0:0,-15.3525,-178.951 dDocent_Contig_7198 91 . T A 47042.1 . AB=0.879562;ABP=688.752;AC=10;AF=0.833333;AN=12;AO=1652;CIGAR=1X;DP=1786;DPB=1786;DPRA=0;EPP=3590.28;EPPR=291.816;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.992131;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=56419;QR=4539;RO=133;RPL=1652;RPP=3590.28;RPPR=291.816;RPR=0;RUN=1;SAF=1652;SAP=3590.28;SAR=0;SRF=133;SRP=291.816;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:265:31,234:31:1057:234:7950:-635.813,0,-15.6645 1/1:357:33,324:33:1137:324:11068:-893.465,-4.83101,0 1/1:178:12,165:12:418:165:5664:-471.983,-15.429,0 0/1:283:35,248:35:1212:248:8473:-677.446,0,-24.1941 1/1:373:12,361:12:409:361:12407:-1079.43,-75.1461,0 1/1:330:10,320:10:306:320:10857:-949.288,-71.5027,0 dDocent_Contig_7199 14 . C A 1544.68 . AB=0.187638;ABP=386.92;AC=5;AF=0.416667;AN=12;AO=90;CIGAR=1X;DP=554;DPB=554;DPRA=0;EPP=198.443;EPPR=1008.4;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3513;QR=18302;RO=463;RPL=0;RPP=198.443;RPPR=1008.4;RPR=90;RUN=1;SAF=90;SAP=198.443;SAR=0;SRF=463;SRP=1008.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:91:81,10:81:3157:10:364:-5.69934,0,-256.809 0/1:21:15,6:15:567:6:237:-15.3804,0,-45.0366 0/1:87:67,20:67:2654:20:779:-44.237,0,-212.793 0/1:122:98,24:98:3895:24:942:-48.3577,0,-313.821 0/1:132:106,25:106:4185:25:995:-50.0155,0,-336.793 0/0:101:96,5:96:3844:5:196:0,-12.3897,-327.945 dDocent_Contig_7200 28 . T A 999.206 . AB=0.134892;ABP=646.782;AC=1;AF=0.0833333;AN=12;AO=81;CIGAR=1X;DP=3214;DPB=3214;DPRA=1.70311;EPP=178.9;EPPR=6804.06;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998404;PAO=0;PQA=0;PQR=0;PRO=0;QA=3213;QR=124962;RO=3132;RPL=0;RPP=178.9;RPPR=6804.06;RPR=81;RUN=1;SAF=81;SAP=178.9;SAR=0;SRF=3132;SRP=6804.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:407:407,0:407:16190:0:0:0,-122.519,-1455.8 0/0:731:730,1:730:29179:1:31:0,-216.953,-2620.34 0/0:401:401,0:401:16057:0:0:0,-120.713,-1443.83 0/0:381:381,0:381:15111:0:0:0,-114.692,-1358.82 0/0:738:733,5:733:29256:5:195:0,-204.239,-2612.43 0/1:556:480,75:480:19169:75:2987:-101.443,0,-1556.11 dDocent_Contig_7201 38 . A G 1025.51 . AB=0.188235;ABP=218.293;AC=3;AF=0.25;AN=12;AO=48;CIGAR=6M1X;DP=411;DPB=413.429;DPRA=0.817308;EPP=107.241;EPPR=743.482;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.912023;PAO=0;PQA=0;PQR=0;PRO=0;QA=1843;QR=12916;RO=341;RPL=0;RPP=107.241;RPPR=743.482;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=341;SRP=743.482;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:38:31,2,5:31:1190:2,5:82,199:-7.04559,-9.60596,-106.674,0,-90.8877,-96.1522 0|1:67:55,0,12:55:2111:0,12:0,463:-21.8513,-38.4079,-211.686,0,-173.663,-170.05 0|0:76:54,13,9:54:2037:13,9:525,348:-27.0349,0,-163.013,-14.7169,-138.344,-178.921 0|1:74:48,2,22:48:1808:2,22:75,833:-53.8413,-62.1483,-209.692,0,-142.001,-141.522 0|0:76:73,0,0:73:2750:0,0:0,0:0,-21.9752,-247.345,-21.9752,-247.345,-247.345 0|0:80:80,0,0:80:3020:0,0:0,0:0,-24.0824,-271.967,-24.0824,-271.967,-271.967 dDocent_Contig_7202 13 . T C 631.894 . AB=0.189189;ABP=158.241;AC=3;AF=0.25;AN=12;AO=40;CIGAR=1X;DP=404;DPB=404;DPRA=1.21754;EPP=89.8692;EPPR=791.255;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1547;QR=12951;RO=363;RPL=0;RPP=89.8692;RPPR=791.255;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=363;SRP=791.255;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:61:55,6:55:1945:6:232:-2.88193,0,-156.943 0/1:47:43,4:43:1595:4:154:-0.0827712,0,-129.678 0/0:68:64,4:64:2164:4:162:0,-5.50308,-180.024 0/1:77:51,25:51:1810:25:958:-63.5191,0,-140.179 0/0:94:93,1:93:3378:1:41:0,-24.2023,-300.098 0/0:57:57,0:57:2059:0:0:0,-17.1587,-185.559 dDocent_Contig_7204 12 . G T 12846.3 . AB=0.233755;ABP=1462.24;AC=2;AF=0.166667;AN=12;AO=579;CIGAR=1X;DP=5828;DPB=5828;DPRA=1.17087;EPP=1260.29;EPPR=11398.9;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.999619;PAO=0;PQA=0;PQR=0;PRO=0;QA=23244;QR=206946;RO=5248;RPL=0;RPP=1260.29;RPPR=11398.9;RPR=579;RUN=1;SAF=579;SAP=1260.29;SAR=0;SRF=5248;SRP=11398.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:803:803,0:803:31493:0:0:0,-241.727,-2831.8 0/0:1012:1000,11:1000:39349:11:433:0,-265.125,-3498.69 0/0:702:688,14:688:27151:14:557:0,-160.853,-2390.84 0/0:941:941,0:941:37192:0:0:0,-283.269,-3344.07 0/1:1290:916,374:916:36188:374:14961:-957,0,-2865.42 0/1:1080:900,180:900:35573:180:7293:-330.857,0,-2873.39 dDocent_Contig_7205 7 . A C 166.864 . AB=0.121795;ABP=196.828;AC=2;AF=0.166667;AN=12;AO=36;CIGAR=1X;DP=510;DPB=510;DPRA=0;EPP=81.1833;EPPR=1032.29;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.388889;PAIREDR=0.481013;PAO=0;PQA=0;PQR=0;PRO=0;QA=1381;QR=18054;RO=474;RPL=0;RPP=81.1833;RPPR=1032.29;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=474;SRP=1032.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:98:85,13:85:3224:13:503:-16.1179,0,-260.809 0/0:104:97,7:97:3664:7:261:0,-7.46016,-306.031 0/1:58:52,6:52:1994:6:232:-3.78919,0,-162.238 0/0:107:105,2:105:4043:2:74:0,-25.1848,-356.933 0/0:69:64,5:64:2429:5:194:0,-2.93822,-200.982 0/0:74:71,3:71:2700:3:117:0,-11.3658,-232.282 dDocent_Contig_7206 30 . A T 1668.66 . AB=0.108871;ABP=332.549;AC=1;AF=0.0833333;AN=12;AO=27;CIGAR=1M1X2M;DP=342;DPB=381;DPRA=0;EPP=61.6401;EPPR=517.649;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1082;QR=9291;RO=237;RPL=0;RPP=61.6401;RPPR=517.649;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=237;SRP=517.649;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:50:40,10,0:40:1597:10,0:379,0:-19.4084,0,-128.921,-31.4496,-131.932,-162.999 0|0:56:35,19,2:35:1341:19,2:755,80:-51.6202,0,-104.31,-55.566,-103.439,-165.001 0|0:95:61,25,9:61:2373:25,9:881,362:-53.3036,0,-187.459,-41.8202,-165.15,-234.133 0|0:37:26,8,3:26:1020:8,3:316,121:-18.1705,0,-81.4631,-16.021,-73.8961,-98.997 0|1:60:36,11,13:36:1419:11,13:422,519:-31.9159,-8.12516,-121.55,0,-82.1159,-112.835 0|0:44:39,5,0:39:1541:5,0:184,0:-3.66788,0,-125.692,-15.408,-127.197,-142.235 dDocent_Contig_7208 11 . A C 680.061 . AB=0.104686;ABP=1364.45;AC=2;AF=0.166667;AN=12;AO=107;CIGAR=1X;DP=2662;DPB=2662;DPRA=1.24452;EPP=235.358;EPPR=5551.12;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4224;QR=101862;RO=2555;RPL=0;RPP=235.358;RPPR=5551.12;RPR=107;RUN=1;SAF=107;SAP=235.358;SAR=0;SRF=2555;SRP=5551.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:414:414,0:414:16471:0:0:0,-124.626,-1481.11 0/0:473:471,2:471:18724:2:82:0,-134.608,-1675.85 0/0:305:305,0:305:12215:0:0:0,-91.8141,-1098.45 0/0:467:467,0:467:18629:0:0:0,-140.581,-1675.07 0/1:495:441,54:441:17565:54:2137:-43.5082,0,-1430.42 0/1:508:457,51:457:18258:51:2005:-27.7198,0,-1488.79 dDocent_Contig_7209 22 . T C 52.652 . AB=0.111111;ABP=85.7675;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=358;DPB=358;DPRA=0.977901;EPP=31.2394;EPPR=752.168;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.956522;PAO=0;PQA=0;PQR=0;PRO=0;QA=524;QR=12993;RO=345;RPL=0;RPP=31.2394;RPPR=752.168;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=345;SRP=752.168;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:72:72,0:72:2673:0:0:0,-21.6742,-240.757 0/1:63:56,7:56:2119:7:282:-6.78807,0,-171.969 0/0:57:54,3:54:2077:3:119:0,-6.0637,-176.058 0/0:57:54,3:54:2038:3:123:0,-5.69392,-172.185 0/0:44:44,0:44:1692:0:0:0,-13.2453,-152.534 0/0:65:65,0:65:2394:0:0:0,-19.5669,-215.664 dDocent_Contig_7210 1 . N G 149.29 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=154;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:40:-3.99568,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:114:-10.6309,-0.90309,0 ./.:.:.:.:.:.:.:. dDocent_Contig_7211 56 . G A 312.39 . AB=0.107438;ABP=488.9;AC=1;AF=0.0833333;AN=12;AO=58;CIGAR=1X;DP=3667;DPB=3667;DPRA=0;EPP=75.4926;EPPR=7779.05;GTI=0;LEN=1;MEANALT=1.83333;MQM=58.2759;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.689655;PAIREDR=0.998883;PAO=0;PQA=0;PQR=0;PRO=0;QA=2218;QR=140413;RO=3581;RPL=58;RPP=128.956;RPPR=7779.05;RPR=0;RUN=1;SAF=51;SAP=75.4926;SAR=7;SRF=3581;SRP=7779.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:674:669,3:669:26179:3:98:0,-193.521,-2344.79 0/0:742:738,4:738:28842:4:120:0,-212.274,-2582.25 0/0:582:576,4:576:22632:4:159:0,-160.354,-2020.37 0/0:819:810,6:810:31900:6:200:0,-227.728,-2849.92 0/0:487:469,2:469:18244:2:78:0,-134.791,-1633.21 0/1:363:319,39:319:12616:39:1563:-32.7619,0,-1026.48 dDocent_Contig_7212 18 . A G 977.15 . AB=0.202381;ABP=196.892;AC=6;AF=0.5;AN=12;AO=51;CIGAR=1X;DP=252;DPB=252;DPRA=0;EPP=113.755;EPPR=439.476;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.686275;PAIREDR=0.711443;PAO=0;PQA=0;PQR=0;PRO=0;QA=2029;QR=8011;RO=201;RPL=0;RPP=113.755;RPPR=439.476;RPR=51;RUN=1;SAF=51;SAP=113.755;SAR=0;SRF=201;SRP=439.476;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:21,7:21:830:7:281:-17.2322,0,-66.583 0/1:75:65,10:65:2606:10:388:-12.6962,0,-212.087 0/1:22:17,5:17:671:5:201:-11.8479,0,-54.0965 0/1:46:36,10:36:1446:10:403:-22.7827,0,-116.543 0/1:32:26,6:26:1035:6:242:-12.5244,0,-83.8094 0/1:49:36,13:36:1423:13:514:-31.8536,0,-113.57 dDocent_Contig_7213 38 . C A 9141.55 . AB=0.0662252;ABP=249.796;AC=0;AF=0;AN=12;AO=10;CIGAR=10M1X6M;DP=583;DPB=602.647;DPRA=0;EPP=24.725;EPPR=463.362;GTI=0;LEN=1;MEANALT=8;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=378;QR=8172;RO=212;RPL=0;RPP=24.725;RPPR=463.362;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=212;SRP=463.362;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:112:27,12,68,0:27:1031:12,68,0:444,2512,0:-197.356,-169.162,-250.138,0,-48.2899,-64.1433,-205.484,-253.75,-84.6133,-290.071 0|0:61:24,0,37,0:24:923:0,37,0:0,1364,0:-104.665,-111.89,-187.671,0,-76.1587,-65.0206,-111.89,-187.671,-76.1587,-187.671 0|0:68:8,0,56,0:8:314:0,56,0:0,2096,0:-169.42,-171.828,-197.656,0,-25.9696,-9.11193,-171.828,-197.656,-25.9696,-197.656 0|0:111:19,0,88,0:19:726:0,88,0:0,3270,0:-262.072,-267.791,-327.359,0,-59.7513,-33.2607,-267.791,-327.359,-59.7513,-327.359 0|0:151:107,1,25,10:107:4140:1,25,10:40,920,378:-43.0198,-71.9339,-411.706,0,-336.796,-332.565,-44.2465,-381.03,-309.114,-381.315 0|0:80:27,0,51,0:27:1038:0,51,0:0,1916,0:-148.844,-156.971,-242.183,0,-85.2311,-69.8786,-156.971,-242.183,-85.2311,-242.183 dDocent_Contig_7214 98 . N T 4767.6 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=155;CIGAR=4X;DP=155;DPB=155.5;DPRA=0;EPP=339.589;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=2;PQA=70;PQR=0;PRO=0;QA=5285;QR=0;RO=0;RPL=155;RPP=339.589;RPPR=0;RPR=0;RUN=1;SAF=155;SAP=339.589;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:84:0,84:0:0:84:2857:-257.383,-25.2865,0 1|1:12:0,12:0:0:12:414:-37.2418,-3.61236,0 1|1:56:0,56:0:0:56:1910:-171.83,-16.8577,0 .:.:.:.:.:.:.:. 1|1:3:0,3:0:0:3:104:-9.70309,-0.90309,0 dDocent_Contig_7216 28 . T C 6724.72 . AB=0.154532;ABP=2793.66;AC=3;AF=0.25;AN=12;AO=549;CIGAR=1X;DP=5478;DPB=5478;DPRA=0;EPP=1195.15;EPPR=10697.5;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998179;PAIREDR=0.999797;PAO=0;PQA=0;PQR=0;PRO=0;QA=21787;QR=195031;RO=4925;RPL=0;RPP=1195.15;RPPR=10697.5;RPR=549;RUN=1;SAF=549;SAP=1195.15;SAR=0;SRF=4925;SRP=10697.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:951:877,74:877:34618:74:2918:0,-23.5655,-2849.81 0/1:1032:856,175:856:33923:175:7026:-321.256,0,-2739.27 0/1:617:534,83:534:21136:83:3257:-107.445,0,-1714.74 0/1:1043:884,158:884:35171:158:6259:-248.993,0,-2848.12 0/0:894:859,35:859:33981:35:1378:0,-144.845,-2930.98 0/0:941:915,24:915:36202:24:949:0,-197.349,-3169.22 dDocent_Contig_7217 113 . C T 821.099 . AB=0.14587;ABP=622.811;AC=3;AF=0.25;AN=12;AO=105;CIGAR=1X;DP=1075;DPB=1075;DPRA=2.08723;EPP=231.015;EPPR=2107.17;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.971429;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3604;QR=33163;RO=969;RPL=0;RPP=231.015;RPPR=2107.17;RPR=105;RUN=1;SAF=0;SAP=231.015;SAR=105;SRF=0;SRP=2107.17;SRR=969;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:177:154,23:154:5243:23:799:-18.948,0,-418.757 0/1:213:188,25:188:6439:25:853:-12.9653,0,-515.527 0/1:179:143,35:143:4919:35:1210:-55.4184,0,-389.108 0/0:278:257,21:257:8784:21:708:0,-19.6511,-726.579 0/0:134:133,1:133:4547:1:34:0,-36.9391,-406.026 0/0:94:94,0:94:3231:0:0:0,-28.2968,-291.028 dDocent_Contig_7218 34 . G C 426.133 . AB=0.167742;ABP=151.637;AC=2;AF=0.166667;AN=12;AO=34;CIGAR=1X;DP=426;DPB=426;DPRA=1.13125;EPP=76.8404;EPPR=852.056;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.382353;PAIREDR=0.55243;PAO=0;PQA=0;PQR=0;PRO=0;QA=1325;QR=15166;RO=391;RPL=0;RPP=76.8404;RPPR=852.056;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=391;SRP=852.056;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:60:53,7:53:2028:7:280:-7.50976,0,-164.658 0/0:76:72,4:72:2801:4:161:0,-8.00338,-237.349 0/0:64:64,0:64:2483:0:0:0,-19.2659,-223.635 0/1:95:76,19:76:2947:19:740:-38.3254,0,-236.76 0/0:43:41,2:41:1614:2:81:0,-5.25856,-137.813 0/0:88:85,2:85:3293:2:63:0,-20.5735,-290.456 dDocent_Contig_7219 22 . C A 62.4555 . AB=0.173913;ABP=24.253;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=149;DPB=149;DPRA=0.912698;EPP=11.6962;EPPR=317.874;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.641379;PAO=0;PQA=0;PQR=0;PRO=0;QA=159;QR=5848;RO=145;RPL=0;RPP=11.6962;RPPR=317.874;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=145;SRP=317.874;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:39,0:39:1567:0:0:0,-11.7402,-141.266 0/1:23:19,4:19:752:4:159:-7.76843,0,-61.0727 0/0:15:15,0:15:613:0:0:0,-4.51545,-55.5068 0/0:32:32,0:32:1295:0:0:0,-9.63296,-116.813 0/0:18:18,0:18:731:0:0:0,-5.41854,-66.1129 0/0:22:22,0:22:890:0:0:0,-6.62266,-80.4075 dDocent_Contig_7220 7 . T G 4731.66 . AB=0.231707;ABP=54.2782;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1M1X7M;DP=234;DPB=217;DPRA=1.86364;EPP=44.2683;EPPR=137.642;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.947368;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=622;QR=2379;RO=62;RPL=0;RPP=44.2683;RPPR=137.642;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=62;SRP=137.642;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:65:13,52,0:13:500:52,0:1959,0:-156.986,0,-25.7794,-160.899,-41.433,-201.95 0|0:38:7,31,0:7:267:31,0:1191,0:-96.0492,0,-12.9525,-98.1564,-22.2844,-120.059 0|0:27:18,9,0:18:700:9,0:345,0:-23.2804,0,-55.2036,-28.6989,-57.9129,-86.2269 0|1:43:10,15,18:10:373:15,18:564,612:-62.2784,-19.0652,-45.0968,-15.6749,0,-40.7905 0|0:22:0,22,0:0:0:22,0:808,0:-73.0367,-6.62266,0,-73.0367,-6.62266,-73.0367 0|0:39:14,24,1:14:539:24,1:911,10:-70.7568,0,-37.2955,-74.3835,-43.9402,-118.339 dDocent_Contig_7225 7 . T A 42.8125 . AB=0.0571429;ABP=181.878;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1M1X7M;DP=223;DPB=224.333;DPRA=1.77966;EPP=16.0391;EPPR=452.505;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=223;QR=8101;RO=207;RPL=0;RPP=16.0391;RPPR=452.505;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=207;SRP=452.505;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:34:34,0,0:34:1331:0,0:0,0:0,-10.235,-120.069,-10.235,-120.069,-120.069 0|0:42:42,0,0:42:1639:0,0:0,0:0,-12.6433,-147.763,-12.6433,-147.763,-147.763 0|0:17:17,0,0:17:670:0,0:0,0:0,-5.11751,-60.6351,-5.11751,-60.6351,-60.6351 0|0:25:25,0,0:25:977:0,0:0,0:0,-7.52575,-88.2405,-7.52575,-88.2405,-88.2405 0|0:55:47,6,1:47:1841:6,1:230,35:-4.73922,0,-149.6,-16.0442,-148.559,-167.135 0|1:50:42,0,5:42:1643:0,5:0,188:-2.75108,-15.3943,-150.491,0,-135.09,-133.585 dDocent_Contig_7226 107 . N T 683.867 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=25;CIGAR=1X;DP=25;DPB=25;DPRA=0;EPP=57.2971;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=740;QR=0;RO=0;RPL=0;RPP=57.2971;RPPR=0;RPR=25;RUN=1;SAF=0;SAP=57.2971;SAR=25;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:65:-6.17345,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:85:-7.93237,-0.90309,0 1/1:12:0,12:0:0:12:358:-32.5124,-3.61236,0 1/1:8:0,8:0:0:8:232:-21.166,-2.40824,0 dDocent_Contig_7227 9 . T C 80.7793 . AB=0.25;ABP=11.6962;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=296;DPB=296;DPRA=0.285714;EPP=11.6962;EPPR=637.08;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.934932;PAO=0;PQA=0;PQR=0;PRO=0;QA=156;QR=11146;RO=292;RPL=0;RPP=11.6962;RPPR=637.08;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=292;SRP=637.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:90:90,0:90:3443:0:0:0,-27.0927,-310.002 0/0:81:81,0:81:3126:0:0:0,-24.3834,-281.492 0/0:22:22,0:22:838:0:0:0,-6.62266,-75.74 0/0:54:54,0:54:2032:0:0:0,-16.2556,-183.107 0/1:16:12,4:12:461:4:156:-9.60081,0,-37.0243 0/0:33:33,0:33:1246:0:0:0,-9.93399,-112.432 dDocent_Contig_7229 1 . N G 157.675 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=163;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_7230 10 . T C 392.186 . AB=0.227273;ABP=59.8634;AC=3;AF=0.25;AN=12;AO=23;CIGAR=1X;DP=195;DPB=195;DPRA=0.913043;EPP=52.9542;EPPR=376.504;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.608696;PAIREDR=0.610465;PAO=0;PQA=0;PQR=0;PRO=0;QA=896;QR=6934;RO=172;RPL=0;RPP=52.9542;RPPR=376.504;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=172;SRP=376.504;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:23,7:23:933:7:280:-16.5391,0,-75.2407 0/0:38:35,3:35:1411:3:120:0,-0.25145,-116.053 0/1:25:16,9:16:644:9:364:-25.599,0,-50.7682 0/1:33:29,4:29:1161:4:132:-2.26435,0,-94.8303 0/0:30:30,0:30:1207:0:0:0,-9.0309,-108.901 0/0:39:39,0:39:1578:0:0:0,-11.7402,-142.251 dDocent_Contig_7232 13 . T C 473.862 . AB=0.25;ABP=42.0968;AC=5;AF=0.416667;AN=12;AO=21;CIGAR=1X;DP=108;DPB=108;DPRA=1.34286;EPP=48.6112;EPPR=191.928;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.988506;PAO=0;PQA=0;PQR=0;PRO=0;QA=845;QR=3288;RO=87;RPL=0;RPP=48.6112;RPPR=191.928;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=87;SRP=191.928;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:18:16,2:16:599:2:74:-1.60548,0,-48.8257 0/0:20:19,1:19:721:1:41:0,-1.92603,-61.1252 0/0:14:14,0:14:537:0:0:0,-4.21442,-48.673 0/1:28:22,6:22:827:6:245:-14.0006,0,-66.3156 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 0/1:26:16,10:16:604:10:404:-28.8933,0,-46.8671 dDocent_Contig_7234 12 . G A 426.424 . AB=0.324444;ABP=63.2421;AC=3;AF=0.25;AN=12;AO=100;CIGAR=1X;DP=559;DPB=559;DPRA=0;EPP=220.158;EPPR=592.52;GTI=0;LEN=1;MEANALT=1;MQM=19.99;MQMR=55.6209;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.877996;PAO=0;PQA=0;PQR=0;PRO=0;QA=3938;QR=17844;RO=459;RPL=0;RPP=220.158;RPPR=999.716;RPR=100;RUN=1;SAF=100;SAP=220.158;SAR=0;SRF=406;SRP=592.52;SRR=53;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:109:99,10:99:3788:10:405:0,-6.21714,-301.664 0/1:107:86,21:86:3353:21:829:-1.51196,0,-252.217 0/0:91:81,10:81:3143:10:390:0,-9.44039,-242.624 0/0:134:127,7:127:5026:7:268:0,-28.9424,-436.194 0/1:61:45,16:45:1766:16:625:-6.15346,0,-139.674 0/1:57:21,36:21:768:36:1421:-39.6879,0,-52.1478 dDocent_Contig_7235 98 . N T 128.791 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=7;CIGAR=2X;DP=7;DPB=9.5;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=19.2857;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=2;PQA=71;PQR=0;PRO=0;QA=239;QR=0;RO=0;RPL=7;RPP=18.2106;RPPR=0;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:5:0,5:0:0:5:170:-8.48694,-1.50515,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:1:0,1:0:0:1:34:-2.07893,-0.30103,0 .:.:.:.:.:.:.:. 1|1:1:0,1:0:0:1:35:-1.83133,-0.30103,0 dDocent_Contig_7236 107 . N A 869.723 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=29;CIGAR=1X;DP=29;DPB=29;DPRA=0;EPP=65.983;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=24.7064;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=963;QR=0;RO=0;RPL=0;RPP=65.983;RPPR=0;RPR=29;RUN=1;SAF=0;SAP=65.983;SAR=29;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:29:0,29:0:0:29:963:-86.9723,-8.72987,0 dDocent_Contig_7237 106 . N T 421.439 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=14;CIGAR=2X;DP=14;DPB=14;DPRA=0;EPP=33.4109;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=34.9286;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0.214286;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=495;QR=0;RO=0;RPL=0;RPP=33.4109;RPPR=0;RPR=14;RUN=1;SAF=0;SAP=33.4109;SAR=14;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:5:0,5:0:0:5:177:-15.0296,-1.50515,0 1|1:1:0,1:0:0:1:36:-2.98075,-0.30103,0 1|1:2:0,2:0:0:2:71:-5.63854,-0.60206,0 1|1:6:0,6:0:0:6:211:-17.8919,-1.80618,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_7238 8 . T C 5070.66 . AB=0.474093;ABP=5.26053;AC=6;AF=0.5;AN=12;AO=183;CIGAR=1X;DP=386;DPB=386;DPRA=0;EPP=400.39;EPPR=443.819;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7030;QR=7812;RO=203;RPL=0;RPP=400.39;RPPR=443.819;RPR=183;RUN=1;SAF=183;SAP=400.39;SAR=0;SRF=203;SRP=443.819;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:45:14,31:14:540:31:1199:-94.659,0,-35.3993 0/1:76:28,48:28:1078:48:1848:-143.691,0,-74.4464 0/1:50:16,34:16:618:34:1309:-103.047,0,-40.908 0/1:95:53,42:53:2031:42:1599:-115.576,0,-154.428 0/1:76:64,12:64:2460:12:458:-18.6908,0,-198.726 0/1:44:28,16:28:1085:16:617:-42.6241,0,-84.709 dDocent_Contig_7239 16 . G A 5512.91 . AB=0.568323;ABP=16.0661;AC=6;AF=0.5;AN=12;AO=183;CIGAR=1X;DP=322;DPB=322;DPRA=0;EPP=400.39;EPPR=304.845;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7309;QR=5494;RO=139;RPL=0;RPP=400.39;RPPR=304.845;RPR=183;RUN=1;SAF=183;SAP=400.39;SAR=0;SRF=139;SRP=304.845;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:47:32,15:32:1260:15:598:-40.0087,0,-99.5192 0/1:53:16,37:16:618:37:1469:-116.506,0,-39.994 0/1:14:4,10:4:163:10:393:-31.5099,0,-10.844 0/1:10:6,4:6:239:4:159:-11.6805,0,-18.8736 0/1:121:50,71:50:1974:71:2851:-220.264,0,-141.432 0/1:77:31,46:31:1240:46:1839:-142.543,0,-88.6947 dDocent_Contig_7240 9 . T A 114.2 . AB=0.205882;ABP=28.557;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=1X;DP=142;DPB=142;DPRA=0.62963;EPP=5.80219;EPPR=20.5268;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0;PAIREDR=0.385185;PAO=0;PQA=0;PQR=0;PRO=0;QA=268;QR=5067;RO=135;RPL=0;RPP=18.2106;RPPR=296.159;RPR=7;RUN=1;SAF=2;SAP=5.80219;SAR=5;SRF=84;SRP=20.5268;SRR=51;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:37,0:37:1382:0:0:0,-11.1381,-124.657 0/1:26:23,3:23:875:3:114:-2.80544,0,-71.242 0/0:14:14,0:14:527:0:0:0,-4.21442,-47.7692 0/0:26:26,0:26:1006:0:0:0,-7.82678,-90.8509 0/1:8:4,4:4:153:4:154:-11.8252,0,-11.7334 0/0:31:31,0:31:1124:0:0:0,-9.33193,-101.452 dDocent_Contig_7241 8 . T A 130.043 . AB=0.190476;ABP=37.9607;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=256;DPB=256;DPRA=1.01176;EPP=24.725;EPPR=537.193;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.947154;PAO=0;PQA=0;PQR=0;PRO=0;QA=374;QR=9471;RO=246;RPL=0;RPP=24.725;RPPR=537.193;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=246;SRP=537.193;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:32,0:32:1237:0:0:0,-9.63296,-111.623 0/0:69:69,0:69:2657:0:0:0,-20.7711,-239.318 0/0:37:37,0:37:1430:0:0:0,-11.1381,-128.979 0/0:32:32,0:32:1231:0:0:0,-9.63296,-111.085 0/1:42:34,8:34:1285:8:298:-14.5272,0,-103.29 0/0:44:42,2:42:1631:2:76:0,-6.03065,-139.837 dDocent_Contig_7242 9 . T C 40711.8 . AB=0.720064;ABP=793.395;AC=6;AF=0.5;AN=12;AO=1353;CIGAR=1X;DP=1879;DPB=1879;DPRA=0;EPP=2941.01;EPPR=1143.03;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.994826;PAIREDR=0.998095;PAO=0;PQA=0;PQR=0;PRO=0;QA=51662;QR=20224;RO=525;RPL=0;RPP=2941.01;RPPR=1143.03;RPR=1353;RUN=1;SAF=1353;SAP=2941.01;SAR=0;SRF=525;SRP=1143.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:246:74,172:74:2859:172:6550:-515.356,0,-183.428 0/1:280:146,134:146:5623:134:5086:-373.462,0,-421.749 0/1:309:44,264:44:1704:264:10059:-811.89,0,-60.5487 0/1:204:86,118:86:3305:118:4469:-340.86,0,-236.181 0/1:434:97,337:97:3727:337:12936:-1033.02,0,-204.894 0/1:406:78,328:78:3006:328:12562:-1007.82,0,-148.484 dDocent_Contig_7243 52 . A T 166.668 . AB=0.122093;ABP=216.37;AC=3;AF=0.25;AN=12;AO=25;CIGAR=1X;DP=329;DPB=329;DPRA=0.6225;EPP=57.2971;EPPR=469.017;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993399;PAO=0;PQA=0;PQR=0;PRO=0;QA=942;QR=11940;RO=303;RPL=25;RPP=57.2971;RPPR=469.017;RPR=0;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=303;SRP=660.966;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:31,1:31:1226:1:39:0,-5.7364,-106.72 0/1:50:43,7:43:1705:7:257:-8.42555,0,-138.628 0/1:54:46,8:46:1800:8:304:-11.4616,0,-145.969 0/0:45:41,3:41:1596:3:115:0,-2.91573,-133.158 0/0:80:80,0:80:3136:0:0:0,-24.0824,-282.335 0/1:68:62,6:62:2477:6:227:-0.322931,0,-202.609 dDocent_Contig_7244 22 . T A 3366.47 . AB=0.335878;ABP=94.9581;AC=6;AF=0.5;AN=12;AO=132;CIGAR=1X;DP=393;DPB=393;DPRA=0;EPP=289.645;EPPR=567.593;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.969697;PAIREDR=0.973077;PAO=0;PQA=0;PQR=0;PRO=0;QA=5157;QR=10154;RO=260;RPL=0;RPP=289.645;RPPR=567.593;RPR=132;RUN=1;SAF=132;SAP=289.645;SAR=0;SRF=260;SRP=567.593;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:27,8:27:1044:8:306:-17.3578,0,-83.7172 0/1:75:58,17:58:2217:17:673:-38.3232,0,-177.139 0/1:87:49,38:49:1951:38:1470:-106.351,0,-149.608 0/1:81:55,25:55:2154:25:990:-65.2084,0,-169.859 0/1:52:39,13:39:1550:13:517:-31.2237,0,-124.089 0/1:63:32,31:32:1238:31:1201:-89.4047,0,-92.7371 dDocent_Contig_7245 107 . N A 2586.49 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=83;CIGAR=1X;DP=83;DPB=83;DPRA=0;EPP=183.243;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2864;QR=0;RO=0;RPL=0;RPP=183.243;RPPR=0;RPR=83;RUN=1;SAF=0;SAP=183.243;SAR=83;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:21:0,21:0:0:21:721:-65.2071,-6.32163,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:62:0,62:0:0:62:2143:-193.141,-18.6639,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_7246 19 . T A 377.637 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=12;CIGAR=1X;DP=12;DPB=12;DPRA=0;EPP=29.068;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=389;QR=0;RO=0;RPL=0;RPP=29.068;RPPR=0;RPR=12;RUN=1;SAF=0;SAP=29.068;SAR=12;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:5:0,5:0:0:5:157:-14.4406,-1.50515,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:2:0,2:0:0:2:67:-6.36304,-0.60206,0 1/1:2:0,2:0:0:2:63:-5.98364,-0.60206,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 dDocent_Contig_7247 10 . T A 964.885 . AB=0.27972;ABP=63.28;AC=3;AF=0.25;AN=12;AO=42;CIGAR=2X;DP=229;DPB=229;DPRA=1.40833;EPP=94.2121;EPPR=404.733;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.52381;PAIREDR=0.610811;PAO=0;PQA=0;PQR=0;PRO=0;QA=1680;QR=7385;RO=185;RPL=0;RPP=94.2121;RPPR=404.733;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=185;SRP=404.733;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:33:26,6:26:1043:6:242:-12.1328,0,-84.138 0|1:58:48,9:48:1924:9:356:-14.8438,0,-155.805 0|0:26:24,2:24:953:2:81:0,-0.141046,-78.3863 0|1:52:27,25:27:1067:25:1001:-74.7333,0,-80.6691 0|0:31:31,0:31:1232:0:0:0,-9.33193,-111.156 0|0:29:29,0:29:1166:0:0:0,-8.72987,-105.22 dDocent_Contig_7248 22 . G A 336.175 . AB=0.117241;ABP=372.041;AC=2;AF=0.166667;AN=12;AO=55;CIGAR=1X;DP=852;DPB=852;DPRA=0.762712;EPP=122.441;EPPR=1733.67;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.624843;PAO=0;PQA=0;PQR=0;PRO=0;QA=2213;QR=31805;RO=797;RPL=0;RPP=122.441;RPPR=1733.67;RPR=55;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=797;SRP=1733.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:113:95,18:95:3772:18:725:-31.5586,0,-305.471 0/0:177:177,0:177:7088:0:0:0,-53.2823,-637.573 0/0:55:53,2:53:2126:2:80:0,-8.96507,-183.922 0/1:177:161,16:161:6396:16:647:-5.28071,0,-522.09 0/0:118:111,7:111:4428:7:284:0,-9.58754,-372.52 0/0:212:200,12:200:7995:12:477:0,-20.5383,-675.828 dDocent_Contig_7249 89 . G A 80.2257 . AB=0.177778;ABP=43.5927;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=117;DPB=117;DPRA=1.38776;EPP=24.725;EPPR=235.358;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=329;QR=3552;RO=107;RPL=10;RPP=24.725;RPPR=235.358;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=107;SRP=235.358;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:459:0:0:0,-4.21442,-41.6255 0/0:18:18,0:18:612:0:0:0,-5.41854,-55.4014 0/0:17:17,0:17:574:0:0:0,-5.11751,-51.9791 0/0:23:21,2:21:694:2:66:0,-0.655511,-56.5032 0/1:28:22,6:22:699:6:196:-9.53274,0,-54.7815 0/1:17:15,2:15:514:2:67:-1.24554,0,-41.4687 dDocent_Contig_7250 30 . A G 9981.84 . AB=0.605607;ABP=54.8375;AC=6;AF=0.5;AN=12;AO=324;CIGAR=1X8M;DP=535;DPB=539;DPRA=0;EPP=706.567;EPPR=352.617;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.833333;PAIREDR=0.857143;PAO=0;PQA=0;PQR=0;PRO=0;QA=12846;QR=6223;RO=161;RPL=0;RPP=706.567;RPPR=352.617;RPR=324;RUN=1;SAF=324;SAP=706.567;SAR=0;SRF=161;SRP=352.617;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:81:18,10,50:18:662:10,50:331,1990:-158.484,-137.148,-188.239,0,-27.3745,-39.076 0|1:98:45,7,42:45:1744:7,42:261,1674:-124.316,-116.499,-257.655,0,-121.906,-130.628 0|1:63:20,0,42:20:778:0,42:0,1674:-132,-138.02,-201.953,0,-64.0952,-51.452 0|1:93:39,14,36:39:1527:14,36:516,1411:-104.305,-73.853,-195.204,0,-83.3953,-114.751 0|1:81:7,2,69:7:276:2,69:76,2737:-223.339,-219.213,-241.32,0,-16.5634,-2.0367 0|1:119:32,2,85:32:1236:2,85:70,3360:-266.9,-270.839,-371.738,0,-95.8446,-75.9502 dDocent_Contig_7251 30 . A G 419.544 . AB=0.186047;ABP=113.452;AC=3;AF=0.25;AN=12;AO=25;CIGAR=1X;DP=270;DPB=270;DPRA=1.06977;EPP=57.2971;EPPR=535.021;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.88;PAIREDR=0.861224;PAO=0;PQA=0;PQR=0;PRO=0;QA=979;QR=9663;RO=245;RPL=0;RPP=57.2971;RPPR=535.021;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=245;SRP=535.021;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:18:14,4:14:549:4:163:-9.63989,0,-44.3271 0/0:55:54,1:54:2142:1:36:0,-12.9584,-189.366 0/1:43:39,4:39:1530:4:164:-2.20561,0,-124.985 0/1:68:52,16:52:2004:16:616:-35.2878,0,-160.086 0/0:32:32,0:32:1282:0:0:0,-9.63296,-115.643 0/0:54:54,0:54:2156:0:0:0,-16.2556,-194.218 dDocent_Contig_7252 10 . G A 168.897 . AB=0.164384;ABP=74.4309;AC=3;AF=0.25;AN=12;AO=14;CIGAR=1X;DP=185;DPB=185;DPRA=0.945312;EPP=33.4109;EPPR=365.697;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.857143;PAIREDR=0.947368;PAO=0;PQA=0;PQR=0;PRO=0;QA=550;QR=6795;RO=171;RPL=0;RPP=33.4109;RPPR=374.332;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=170;SRP=365.697;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:18,2:18:729:2:80:-1.57119,0,-59.913 0/1:27:24,3:24:918:3:117:-2.7824,0,-74.7829 0/0:10:10,0:10:394:0:0:0,-3.0103,-35.8144 0/1:26:19,7:19:742:7:275:-17.2918,0,-59.276 0/0:54:54,0:54:2172:0:0:0,-16.2556,-195.65 0/0:48:46,2:46:1840:2:78:0,-7.04614,-158.407 dDocent_Contig_7253 63 . G A 2443.95 . AB=0.0810811;ABP=59.4099;AC=0;AF=0;AN=12;AO=3;CIGAR=1X2M2X1M10D2M3D2M;DP=210;DPB=185.957;DPRA=0;EPP=9.52472;EPPR=170.214;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0.333333;PAIREDR=0.701299;PAO=0;PQA=0;PQR=0;PRO=0;QA=109;QR=2717;RO=77;RPL=0;RPP=9.52472;RPPR=170.214;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=170.214;SRR=77;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:21:18,2,0,0,1:18:639:2,0,0,1:75,0,0,33:-0.754883,0,-51.4878,-6.17342,-52.0899,-58.2354,-6.17342,-52.0899,-58.2354,-58.2354,-3.52018,-49.423,-55.5685,-55.5685,-55.2675 0|0:37:13,12,3,0,7:13:451:12,3,0,7:443,109,0,260:-32.3198,0,-33.0349,-27.3322,-27.7448,-63.0792,-36.2332,-36.6473,-63.9823,-72.8842,-14.9539,-15.3636,-42.7012,-51.6035,-49.4963 0|0:31:19,3,0,0,7:19:673:3,0,0,7:105,0,0,210:-11.0461,-8.21149,-62.1665,-16.7657,-63.0695,-71.6132,-16.7657,-63.0695,-71.6132,-71.6132,0,-46.2955,-54.838,-54.838,-52.7308 0|0:24:12,2,0,3,7:12:422:2,0,3,7:63,0,106,244:-16.2362,-14.7891,-48.5391,-19.8486,-49.1412,-54.2036,-11.2129,-40.5082,-45.5702,-44.6671,0,-29.2998,-34.3609,-25.727,-32.2536 0|0:45:12,20,0,0,13:12:425:20,0,0,13:736,0,0,465:-59.8723,-3.29755,-31.8962,-63.4847,-37.9168,-98.103,-63.4847,-37.9168,-98.103,-98.103,-25.5738,0,-60.1895,-60.1895,-56.2761 0|0:52:3,43,0,0,6:3:107:43,0,0,6:1570,0,0,192:-134.116,-6.70479,-2.4953,-135.019,-15.4396,-143.741,-135.019,-15.4396,-143.741,-143.741,-119.56,0,-128.282,-128.282,-126.476 dDocent_Contig_7254 65 . A C 69.7773 . AB=0.1125;ABP=107.35;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=580;DPB=580;DPRA=0.8;EPP=22.5536;EPPR=1242.92;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=358;QR=22506;RO=571;RPL=9;RPP=22.5536;RPPR=1242.92;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=571;SRP=1242.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:52:52,0:52:2041:0:0:0,-15.6536,-183.89 0/0:64:64,0:64:2491:0:0:0,-19.2659,-224.347 0/0:51:51,0:51:1975:0:0:0,-15.3525,-177.946 0/1:80:71,9:71:2779:9:358:-8.50061,0,-226.151 0/0:196:196,0:196:7781:0:0:0,-59.0019,-699.902 0/0:137:137,0:137:5439:0:0:0,-41.2411,-489.366 dDocent_Contig_7255 80 . T C 139.08 . AB=0.333333;ABP=8.07707;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=467;DPB=467;DPRA=0.617225;EPP=29.068;EPPR=991.03;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.975824;PAO=0;PQA=0;PQR=0;PRO=0;QA=406;QR=15707;RO=455;RPL=12;RPP=29.068;RPPR=991.03;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=455;SRP=991.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:66:66,0:66:2256:0:0:0,-19.868,-203.31 0/0:118:117,1:117:4023:1:35:0,-32.0229,-358.784 0/0:67:65,2:65:2303:2:70:0,-13.5216,-200.886 0/0:143:143,0:143:4927:0:0:0,-43.0473,-443.612 0/1:21:14,7:14:469:7:238:-15.4309,0,-36.2087 0/0:52:50,2:50:1729:2:63:0,-9.67012,-149.915 dDocent_Contig_7256 7 . T A 122.914 . AB=0.166667;ABP=49.335;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=223;DPB=223;DPRA=1.68595;EPP=24.725;EPPR=463.362;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.995283;PAO=0;PQA=0;PQR=0;PRO=0;QA=386;QR=8086;RO=212;RPL=0;RPP=24.725;RPPR=463.362;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=212;SRP=463.362;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:567:0:0:0,-4.51545,-51.3678 0/0:54:52,2:52:1964:2:76:0,-9.04095,-169.782 0/0:35:35,0:35:1342:0:0:0,-10.536,-121.066 0/0:35:35,0:35:1333:0:0:0,-10.536,-120.256 0/0:36:35,0:35:1339:0:0:0,-10.536,-120.532 0/1:48:40,8:40:1541:8:310:-13.8143,0,-124.513 dDocent_Contig_7257 13 . C T 38.9719 . AB=0.0935252;ABP=202.489;AC=1;AF=0.0833333;AN=12;AO=28;CIGAR=1X;DP=692;DPB=692;DPRA=0.788571;EPP=55.4358;EPPR=1342.52;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.964286;PAIREDR=0.929217;PAO=0;PQA=0;PQR=0;PRO=0;QA=1113;QR=26731;RO=664;RPL=0;RPP=63.8115;RPPR=1444.87;RPR=28;RUN=1;SAF=27;SAP=55.4358;SAR=1;SRF=652;SRP=1342.52;SRR=12;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:139:126,13:126:5100:13:518:-5.11899,0,-417.001 0/0:149:142,7:142:5739:7:284:0,-18.9195,-490.35 0/0:46:45,1:45:1807:1:41:0,-9.75281,-158.743 0/0:121:120,1:120:4791:1:40:0,-32.4289,-427.094 0/0:140:140,0:140:5617:0:0:0,-42.1442,-505.327 0/0:97:91,6:91:3677:6:230:0,-8.13964,-309.871 dDocent_Contig_7260 21 . G A 417.579 . AB=0.823529;ABP=18.4661;AC=1;AF=0.0833333;AN=12;AO=38;CIGAR=1X;DP=1256;DPB=1256;DPRA=1.33024;EPP=85.5263;EPPR=2647.86;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.973684;PAIREDR=0.986043;PAO=0;PQA=0;PQR=0;PRO=0;QA=1430;QR=47649;RO=1218;RPL=0;RPP=85.5263;RPPR=2647.86;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=1218;SRP=2647.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:357:357,0:357:14094:0:0:0,-107.468,-1267.42 0/0:498:475,23:475:18765:23:886:0,-69.863,-1607.29 0/0:202:201,1:201:7725:1:10:0,-59.8081,-693.913 0/0:83:83,0:83:3275:0:0:0,-24.9855,-294.813 0/1:17:3,14:3:121:14:534:-43.2808,0,-6.16269 0/0:99:99,0:99:3669:0:0:0,-29.802,-330.25 dDocent_Contig_7261 107 . N A 199.78 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=204;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:65:-6.17329,-0.60206,0 1/1:3:0,3:0:0:3:104:-9.70309,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_7262 71 . T C 35.0778 . AB=0.153846;ABP=43.6001;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=167;DPB=167;DPRA=1.03659;EPP=20.3821;EPPR=348.274;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.75;PAIREDR=0.578616;PAO=0;PQA=0;PQR=0;PRO=0;QA=251;QR=4964;RO=159;RPL=8;RPP=20.3821;RPPR=348.274;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=159;SRP=348.274;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:573:0:0:0,-5.71957,-51.8602 0/1:39:33,6:33:1053:6:183:-5.03049,0,-83.3221 0/0:16:15,1:15:455:1:35:0,-1.31785,-37.7454 0/0:33:33,0:33:1066:0:0:0,-9.93399,-96.2349 0/0:30:30,0:30:948:0:0:0,-9.0309,-85.6129 0/0:30:29,1:29:869:1:33:0,-5.73176,-75.1901 dDocent_Contig_7263 7 . T C 7497.38 . AB=0.555712;ABP=22.1248;AC=6;AF=0.5;AN=12;AO=394;CIGAR=1X;DP=709;DPB=709;DPRA=0;EPP=807.249;EPPR=633.733;GTI=0;LEN=1;MEANALT=1.16667;MQM=34.769;MQMR=57.121;NS=6;NUMALT=1;ODDS=0;PAIRED=0.347716;PAIREDR=0.917197;PAO=0;PQA=0;PQR=0;PRO=0;QA=15211;QR=11973;RO=314;RPL=0;RPP=858.57;RPPR=684.853;RPR=394;RUN=1;SAF=388;SAP=807.249;SAR=6;SRF=308;SRP=633.733;SRR=6;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:104:52,52:52:1978:52:2007:-115.705,0,-139.576 0/1:110:44,66:44:1681:66:2558:-130.682,0,-117.026 0/1:96:32,64:32:1220:64:2474:-137.172,0,-71.6272 0/1:135:52,82:52:1990:82:3159:-164.39,0,-127.087 0/1:132:60,72:60:2287:72:2774:-124.388,0,-166.312 0/1:132:74,58:74:2817:58:2239:-88.6214,0,-213.977 dDocent_Contig_7264 12 . A C 6804.61 . AB=0.0416667;ABP=221.967;AC=0;AF=0;AN=12;AO=5;CIGAR=2X;DP=343;DPB=343;DPRA=0;EPP=13.8677;EPPR=259.244;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.991525;PAO=0;PQA=0;PQR=0;PRO=0;QA=194;QR=4668;RO=118;RPL=0;RPP=13.8677;RPPR=259.244;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=118;SRP=259.244;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:64:26,1,37:26:1023:1,37:30,1495:-115.523,-120.954,-204.792,0,-81.8379,-73.0949 0|0:41:7,0,34:7:271:0,34:0,1326:-107.257,-109.364,-131.621,0,-22.6444,-12.4094 0|0:129:45,0,84:45:1772:0,84:0,3370:-264.51,-278.056,-423.821,0,-146.161,-120.874 0|0:53:21,0,32:21:839:0,32:0,1292:-100.588,-106.91,-176.013,0,-69.5039,-59.8709 0|0:17:6,1,10:6:239:1,10:41,404:-31.4947,-29.9162,-49.294,0,-16.2852,-16.6607 0|0:39:13,3,23:13:524:3,23:123,925:-72.3098,-66.07,-108.359,0,-33.0324,-36.2622 dDocent_Contig_7265 14 . C T 230.953 . AB=0.101351;ABP=615.894;AC=3;AF=0.25;AN=12;AO=64;CIGAR=1X;DP=864;DPB=864;DPRA=0;EPP=141.985;EPPR=1731.5;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=59.9271;NS=6;NUMALT=1;ODDS=0;PAIRED=0.546875;PAIREDR=0.645729;PAO=0;PQA=0;PQR=0;PRO=0;QA=2547;QR=31993;RO=796;RPL=0;RPP=141.985;RPPR=1731.5;RPR=64;RUN=1;SAF=64;SAP=141.985;SAR=0;SRF=796;SRP=1731.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:79:69,8:69:2744:8:317:-5.30961,0,-223.47 0/1:185:167,16:167:6684:16:642:-2.61648,0,-545.759 0/1:180:159,21:159:6391:21:825:-20.3739,0,-520.715 0/0:158:149,9:149:5975:9:362:0,-14.6186,-504.574 0/0:125:123,2:123:4969:2:82:0,-29.8491,-437.313 0/0:137:129,8:129:5230:8:319:0,-12.164,-441.446 dDocent_Contig_7267 10 . G A 1200.97 . AB=0.290698;ABP=68.4575;AC=5;AF=0.416667;AN=12;AO=50;CIGAR=1X;DP=211;DPB=211;DPRA=0.882051;EPP=111.584;EPPR=352.617;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.98;PAIREDR=0.906832;PAO=0;PQA=0;PQR=0;PRO=0;QA=1992;QR=6482;RO=161;RPL=0;RPP=111.584;RPPR=352.617;RPR=50;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=161;SRP=352.617;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:16,3:16:633:3:121:-5.56063,0,-51.5813 0/1:43:27,16:27:1091:16:644:-45.3502,0,-85.5278 0/1:29:26,3:26:1060:3:122:-2.64262,0,-86.9562 0/1:40:19,21:19:769:21:820:-62.0674,0,-57.489 0/0:39:39,0:39:1574:0:0:0,-11.7402,-141.89 0/1:41:34,7:34:1355:7:285:-13.6822,0,-109.865 dDocent_Contig_7268 18 . G A 6449.35 . AB=0.4319;ABP=25.4878;AC=6;AF=0.5;AN=12;AO=241;CIGAR=1X3M;DP=558;DPB=558;DPRA=0;EPP=526.335;EPPR=663.138;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.995851;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9112;QR=11661;RO=304;RPL=0;RPP=526.335;RPPR=663.138;RPR=241;RUN=1;SAF=241;SAP=526.335;SAR=0;SRF=304;SRP=663.138;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:67:31,0,36:31:1179:0,36:0,1374:-103.77,-113.102,-209.793,0,-97.0719,-86.2348 0|1:74:38,1,35:38:1444:1,35:39,1289:-93.9278,-102.16,-220.282,0,-115.201,-107.871 0|1:36:16,6,14:16:626:6,14:237,550:-40.4194,-25.7331,-75.3965,0,-31.9646,-47.2533 0|1:88:19,4,65:19:722:4,65:161,2483:-197.968,-190.417,-248.416,0,-45.9121,-39.6184 0|1:156:111,0,43:111:4269:0,43:0,1589:-96.6414,-130.056,-480.521,0,-350.574,-337.629 0|1:137:89,0,48:89:3421:0,48:0,1827:-123.43,-150.221,-431.054,0,-281.214,-266.765 dDocent_Contig_7269 36 . A T 1392.61 . AB=0.0307692;ABP=127.319;AC=0;AF=0;AN=12;AO=2;CIGAR=1M6I5M1X1M1X2M1X2M2X1M1X1M;DP=377;DPB=498.368;DPRA=0;EPP=7.35324;EPPR=183.243;GTI=0;LEN=1;MEANALT=11;MQM=24;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.879518;PAO=0;PQA=0;PQR=0;PRO=0;QA=48;QR=3275;RO=83;RPL=0;RPP=7.35324;RPPR=183.243;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=83;SRP=183.243;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:65:22,2,11:22:865:2,11:48,264:-10.8422,-14.2889,-84.8871,0,-68.0307,-67.8931 0|0:77:22,0,22:22:870:0,22:0,528:-28.3033,-34.9259,-106.563,0,-71.6417,-65.019 0|0:32:8,0,7:8:321:0,7:0,168:-8.69603,-11.1043,-37.591,0,-26.4915,-24.3843 0|0:70:17,0,24:17:669:0,24:0,603:-35.4136,-40.5311,-95.5975,0,-55.0733,-47.8486 0|0:69:7,0,30:7:279:0,30:0,720:-45.5229,-47.6301,-70.6218,0,-22.9973,-13.9664 0|0:64:7,0,15:7:271:0,15:0,360:-21.7054,-23.8126,-46.0865,0,-22.2751,-17.7597 dDocent_Contig_7273 24 . T A 67.3078 . AB=0.266667;ABP=10.1038;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X3M1X;DP=85;DPB=85;DPRA=1.07143;EPP=11.6962;EPPR=178.9;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.703704;PAO=0;PQA=0;PQR=0;PRO=0;QA=144;QR=3203;RO=81;RPL=0;RPP=11.6962;RPPR=178.9;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=81;SRP=178.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:15:15,0:15:582:0:0:0,-4.51545,-52.7176 0|1:15:11,4:11:434:4:144:-8.25361,0,-34.8996 0|0:20:20,0:20:790:0:0:0,-6.0206,-71.4204 0|0:19:19,0:19:760:0:0:0,-5.71957,-68.7243 0|0:12:12,0:12:478:0:0:0,-3.61236,-43.3724 0|0:4:4,0:4:159:0:0:0,-1.20412,-14.6923 dDocent_Contig_7274 11 . T A 154.665 . AB=0.169811;ABP=53.2;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=264;DPB=264;DPRA=1.25592;EPP=22.5536;EPPR=556.736;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.858824;PAO=0;PQA=0;PQR=0;PRO=0;QA=362;QR=10164;RO=255;RPL=0;RPP=22.5536;RPPR=556.736;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=255;SRP=556.736;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:768:0:0:0,-5.71957,-69.44 0/1:53:44,9:44:1779:9:362:-16.9894,0,-144.36 0/0:52:52,0:52:2039:0:0:0,-15.6536,-183.704 0/0:49:49,0:49:1956:0:0:0,-14.7505,-176.233 0/0:32:32,0:32:1265:0:0:0,-9.63296,-114.112 0/0:59:59,0:59:2357:0:0:0,-17.7608,-212.284 dDocent_Contig_7275 21 . A G 93.5177 . AB=0.140351;ABP=67.0497;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=151;DPB=151;DPRA=1.25373;EPP=24.725;EPPR=309.188;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=401;QR=5637;RO=141;RPL=0;RPP=24.725;RPPR=309.188;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=141;SRP=309.188;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:29,3:29:1167:3:119:-1.46154,0,-95.6724 0/0:27:25,2:25:1001:2:82:0,-0.348132,-82.6074 0/0:52:52,0:52:2064:0:0:0,-15.6536,-185.945 0/1:25:20,5:20:805:5:200:-10.8538,0,-65.2402 0/0:3:3,0:3:123:0:0:0,-0.90309,-11.4648 0/0:12:12,0:12:477:0:0:0,-3.61236,-43.2786 dDocent_Contig_7277 74 . T C 207.226 . AB=0.282051;ABP=19.1015;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=221;DPB=221;DPRA=1.07143;EPP=26.8965;EPPR=456.848;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=374;QR=7328;RO=209;RPL=11;RPP=26.8965;RPPR=456.848;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=209;SRP=456.848;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:6:6,0:6:182:0:0:0,-1.80618,-16.6776 0/0:80:80,0:80:2754:0:0:0,-24.0824,-248.104 0/0:21:21,0:21:743:0:0:0,-6.32163,-67.1921 0/0:36:36,0:36:1272:0:0:0,-10.8371,-114.774 0/1:39:28,11:28:1007:11:374:-22.2455,0,-79.2037 0/0:39:38,0:38:1370:0:0:0,-11.4391,-123.265 dDocent_Contig_7279 7 . T C 3527.41 . AB=0.0474308;ABP=453.106;AC=0;AF=0;AN=12;AO=12;CIGAR=1X2M1X;DP=311;DPB=311;DPRA=0;EPP=29.068;EPPR=367.818;GTI=0;LEN=1;MEANALT=2.4;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.994048;PAO=0;PQA=0;PQR=0;PRO=0;QA=461;QR=6466;RO=168;RPL=0;RPP=29.068;RPPR=367.818;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=168;SRP=367.818;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:39:21,1,0,17:21:806:1,0,17:39,0,685:-50.1496,-53.2661,-119.114,-56.4712,-119.415,-122.621,0,-62.9479,-66.154,-61.0365 0|0:74:41,6,0,27:41:1572:6,0,27:227,0,1093:-77.8012,-71.539,-198.743,-90.1434,-200.55,-219.158,0,-110.419,-129.028,-120.9 0|0:48:30,1,3,14:30:1157:1,3,14:39,117,549:-36.1147,-41.9398,-136.648,-35.5283,-127.331,-129.634,0,-91.8033,-85.3913,-90.7949 0|0:58:34,0,2,22:34:1309:0,2,22:0,75,888:-62.993,-73.228,-180.697,-67.0868,-174.554,-173.952,0,-107.488,-101.345,-100.865 0|0:52:24,1,0,27:24:927:1,0,27:39,0,1090:-82.6428,-86.6621,-162.489,-89.8675,-162.79,-165.996,0,-72.9268,-76.1328,-68.005 0|0:40:18,3,0,18:18:695:3,0,18:117,0,724:-54.2612,-50.0635,-106.233,-59.6797,-107.137,-116.754,0,-47.4626,-57.0809,-51.6623 dDocent_Contig_7281 32 . G A 134.948 . AB=0.152778;ABP=78.4086;AC=3;AF=0.25;AN=12;AO=11;CIGAR=1X;DP=121;DPB=121;DPRA=1.46939;EPP=26.8965;EPPR=241.872;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.981818;PAO=0;PQA=0;PQR=0;PRO=0;QA=431;QR=4390;RO=110;RPL=0;RPP=26.8965;RPPR=241.872;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=110;SRP=241.872;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:8:8,0:8:318:0:0:0,-2.40824,-28.9872 0/0:3:3,0:3:122:0:0:0,-0.90309,-11.3725 0/1:20:18,2:18:730:2:80:-1.57119,0,-60.0039 0/1:27:21,6:21:848:6:230:-12.9347,0,-68.5053 0/0:38:38,0:38:1522:0:0:0,-11.4391,-137.224 0/1:25:22,3:22:850:3:121:-3.75445,0,-69.2787 dDocent_Contig_7282 107 . N A 1323.77 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=52;CIGAR=1X;DP=53;DPB=53;DPRA=0;EPP=115.927;EPPR=0;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1462;QR=0;RO=0;RPL=0;RPP=115.927;RPPR=0;RPR=52;RUN=1;SAF=0;SAP=115.927;SAR=52;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:52:0,51:0:0:51:1431:-128.975,-15.3525,0 dDocent_Contig_7283 7 . T A 166.404 . AB=0.204545;ABP=36.372;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=226;DPB=226;DPRA=1.20879;EPP=22.5536;EPPR=474.22;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990783;PAO=0;PQA=0;PQR=0;PRO=0;QA=345;QR=8332;RO=217;RPL=0;RPP=22.5536;RPPR=474.22;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=217;SRP=474.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:32,0:32:1230:0:0:0,-9.63296,-110.993 0/0:37:37,0:37:1396:0:0:0,-11.1381,-125.922 0/0:23:23,0:23:893:0:0:0,-6.92369,-80.6892 0/0:40:40,0:40:1536:0:0:0,-12.0412,-138.512 0/1:44:35,9:35:1354:9:345:-18.1633,0,-108.899 0/0:50:50,0:50:1923:0:0:0,-15.0515,-173.312 dDocent_Contig_7284 22 . G C 1395.98 . AB=0.125379;ABP=1208.59;AC=4;AF=0.333333;AN=12;AO=145;CIGAR=1X;DP=1401;DPB=1401;DPRA=0;EPP=317.874;EPPR=2728.21;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.558621;PAIREDR=0.695618;PAO=0;PQA=0;PQR=0;PRO=0;QA=5748;QR=49972;RO=1255;RPL=0;RPP=317.874;RPPR=2728.21;RPR=145;RUN=1;SAF=145;SAP=317.874;SAR=0;SRF=1255;SRP=2728.21;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:201:188,13:188:7488:13:509:0,-14.3519,-627.41 0/1:295:259,35:259:10205:35:1369:-34.8581,0,-829.2 0/1:201:184,17:184:7331:17:684:-1.37911,0,-598.919 0/1:236:209,27:209:8385:27:1075:-25.995,0,-683.119 0/0:211:203,8:203:8109:8:321:0,-34.259,-700.097 0/1:257:212,45:212:8454:45:1790:-83.9499,0,-683.014 dDocent_Contig_7285 21 . A T 209.872 . AB=0.172414;ABP=111.135;AC=3;AF=0.25;AN=12;AO=24;CIGAR=1X;DP=224;DPB=224;DPRA=1.46491;EPP=55.1256;EPPR=280.959;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=58.5;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.1;PAO=0;PQA=0;PQR=0;PRO=0;QA=808;QR=6823;RO=200;RPL=0;RPP=55.1256;RPPR=437.305;RPR=24;RUN=1;SAF=0;SAP=55.1256;SAR=24;SRF=20;SRP=280.959;SRR=180;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:29,9:29:1009:9:304:-16.2498,0,-79.4848 0/1:43:38,5:38:1309:5:167:-2.41509,0,-105.098 0/1:35:29,6:29:994:6:197:-7.51714,0,-78.3628 0/0:51:47,4:47:1585:4:140:0,-2.4076,-129.766 0/0:31:31,0:31:1020:0:0:0,-9.33193,-92.0529 0/0:26:26,0:26:906:0:0:0,-7.82678,-81.5237 dDocent_Contig_7286 71 . G A 586.868 . AB=0.245763;ABP=69.2586;AC=2;AF=0.166667;AN=12;AO=33;CIGAR=1X;DP=423;DPB=423;DPRA=0.637097;EPP=74.6689;EPPR=847.713;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.363636;PAIREDR=0.341902;PAO=0;PQA=0;PQR=0;PRO=0;QA=1227;QR=14564;RO=389;RPL=22;RPP=10.9724;RPPR=219.65;RPR=11;RUN=1;SAF=22;SAP=10.9724;SAR=11;SRF=293;SRP=219.65;SRR=96;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:55:52,3:52:1943:3:114:0,-5.92467,-164.487 0/0:86:86,0:86:3162:0:0:0,-25.8886,-284.756 0/0:64:63,1:63:2321:1:40:0,-15.2702,-205.089 0/0:100:100,0:100:3771:0:0:0,-30.103,-339.465 0/1:57:45,11:45:1715:11:398:-19.2074,0,-137.658 0/1:61:43,18:43:1652:18:675:-42.7013,0,-130.564 dDocent_Contig_7287 24 . T C 66.2068 . AB=0.147059;ABP=39.7976;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=169;DPB=169;DPRA=1.15888;EPP=18.2106;EPPR=354.789;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.907407;PAO=0;PQA=0;PQR=0;PRO=0;QA=282;QR=6433;RO=162;RPL=0;RPP=18.2106;RPPR=354.789;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=162;SRP=354.789;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1118:0:0:0,-8.42884,-100.899 0/0:28:26,2:26:1051:2:82:0,-0.649162,-87.101 0/1:34:29,5:29:1120:5:200:-8.1434,0,-90.8421 0/0:23:23,0:23:909:0:0:0,-6.92369,-82.1163 0/0:27:27,0:27:1082:0:0:0,-8.12781,-97.6659 0/0:29:29,0:29:1153:0:0:0,-8.72987,-104.052 dDocent_Contig_7288 10 . C G 38.2054 . AB=0.100775;ABP=181.593;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=434;DPB=434;DPRA=2.33846;EPP=35.5824;EPPR=908.514;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.933333;PAIREDR=0.621103;PAO=0;PQA=0;PQR=0;PRO=0;QA=566;QR=16774;RO=417;RPL=0;RPP=35.5824;RPPR=908.514;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=417;SRP=908.514;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:129:115,13:115:4606:13:485:-5.04233,0,-375.512 0/0:84:84,0:84:3402:0:0:0,-25.2865,-306.211 0/0:77:76,1:76:3094:1:40:0,-19.1836,-274.52 0/0:98:97,1:97:3883:1:41:0,-25.4064,-345.364 0/0:23:22,0:22:875:0:0:0,-6.62266,-78.9456 0/0:23:23,0:23:914:0:0:0,-6.92369,-82.5634 dDocent_Contig_7289 14 . A G 596.254 . AB=0.181347;ABP=173.229;AC=5;AF=0.416667;AN=12;AO=36;CIGAR=1X;DP=234;DPB=234;DPRA=0;EPP=81.1833;EPPR=432.962;GTI=0;LEN=1;MEANALT=1;MQM=51.1667;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.494949;PAO=0;PQA=0;PQR=0;PRO=0;QA=1444;QR=7899;RO=198;RPL=0;RPP=81.1833;RPPR=432.962;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=198;SRP=432.962;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:25,6:25:1010:6:245:-12.871,0,-81.863 0/1:35:20,15:20:784:15:603:-43.4754,0,-60.3414 0/1:28:25,3:25:981:3:116:-2.24543,0,-80.1558 0/1:37:33,4:33:1336:4:152:-2.84297,0,-109.359 0/1:62:55,7:55:2202:7:287:-7.36371,0,-179.687 0/0:41:40,1:40:1586:1:41:0,-8.27542,-138.909 dDocent_Contig_7290 14 . A T 1635.4 . AB=0.313305;ABP=73.5505;AC=4;AF=0.333333;AN=12;AO=73;CIGAR=1X;DP=278;DPB=278;DPRA=2.58889;EPP=161.528;EPPR=163.265;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.682927;PAO=0;PQA=0;PQR=0;PRO=0;QA=2662;QR=8035;RO=205;RPL=0;RPP=161.528;RPPR=448.162;RPR=73;RUN=1;SAF=73;SAP=161.528;SAR=0;SRF=164;SRP=163.265;SRR=41;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:94:75,19:75:2924:19:671:-32.4103,0,-234.978 0/1:58:42,16:42:1637:16:609:-37.6887,0,-130.109 0/1:23:19,4:19:745:4:155:-7.40175,0,-60.4531 0/1:58:24,34:24:952:34:1227:-93.261,0,-68.5267 0/0:10:10,0:10:396:0:0:0,-3.0103,-35.999 0/0:35:35,0:35:1381:0:0:0,-10.536,-124.554 dDocent_Contig_7291 11 . A T 180.24 . AB=0.025641;ABP=79.2345;AC=0;AF=0;AN=12;AO=10;CIGAR=1X1M2X;DP=335;DPB=335;DPRA=0.903955;EPP=24.725;EPPR=645.766;GTI=0;LEN=1;MEANALT=2;MQM=36.6;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=0;PAIREDR=0.993243;PAO=0;PQA=0;PQR=0;PRO=0;QA=384;QR=11792;RO=296;RPL=0;RPP=24.725;RPPR=645.766;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=296;SRP=645.766;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:36:33,2,0:33:1314:2,0:71,0:0,-4.76417,-112.491,-9.93399,-113.093,-118.219 0|0:85:73,7,5:73:2893:7,5:273,197:0,-2.2011,-238.204,-5.74881,-224.104,-242.396 0|0:44:39,0,3:39:1548:0,3:0,98:0,-11.7402,-139.247,-3.80318,-131.343,-130.44 0|0:39:33,1,5:33:1320:1,5:40,193:-5.91805,-12.9287,-121.375,0,-105.848,-107.269 0|0:74:70,0,3:70:2795:0,3:0,121:0,-21.0721,-251.302,-11.149,-241.482,-240.579 0|0:57:48,0,9:48:1922:0,9:0,357:-15.3278,-29.7772,-188.115,0,-158.734,-156.025 dDocent_Contig_7292 164 . T C 244.298 . AB=0.216667;ABP=44.8473;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=141;DPB=141;DPRA=1.48148;EPP=31.2394;EPPR=200.886;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.976562;PAO=0;PQA=0;PQR=0;PRO=0;QA=500;QR=5069;RO=128;RPL=13;RPP=31.2394;RPPR=200.886;RPR=0;RUN=1;SAF=0;SAP=31.2394;SAR=13;SRF=0;SRP=280.959;SRR=128;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:31,6:31:1232:6:217:-8.73214,0,-100.014 0/0:36:36,0:36:1414:0:0:0,-10.8371,-127.519 0/1:23:16,7:16:635:7:283:-18.9195,0,-50.5602 0/0:24:24,0:24:953:0:0:0,-7.22472,-86.0674 0/0:8:8,0:8:316:0:0:0,-2.40824,-28.8046 0/0:13:13,0:13:519:0:0:0,-3.91339,-47.0557 dDocent_Contig_7293 107 . N T 1159.8 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=40;CIGAR=1X;DP=40;DPB=40;DPRA=0;EPP=89.8692;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1274;QR=0;RO=0;RPL=0;RPP=89.8692;RPPR=0;RPR=40;RUN=1;SAF=0;SAP=89.8692;SAR=40;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:23:-2.29991,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:27:0,27:0:0:27:858:-77.5153,-8.12781,0 1/1:12:0,12:0:0:12:393:-35.6866,-3.61236,0 dDocent_Contig_7294 30 . C A 177.144 . AB=0.192308;ABP=45.7716;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=175;DPB=175;DPRA=0.845528;EPP=24.725;EPPR=361.303;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.9;PAIREDR=0.672727;PAO=0;PQA=0;PQR=0;PRO=0;QA=398;QR=6611;RO=165;RPL=0;RPP=24.725;RPPR=361.303;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=165;SRP=361.303;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:920:0:0:0,-6.92369,-83.1033 0/1:36:28,8:28:1119:8:318:-18.149,0,-90.1608 0/1:16:14,2:14:552:2:80:-2.77531,0,-45.2013 0/0:39:39,0:39:1566:0:0:0,-11.7402,-141.178 0/0:25:25,0:25:1002:0:0:0,-7.52575,-90.4771 0/0:36:36,0:36:1452:0:0:0,-10.8371,-130.929 dDocent_Contig_7295 11 . T A 9534.16 . AB=0.0494382;ABP=787.673;AC=4;AF=0.333333;AN=12;AO=22;CIGAR=1X2M1X1M2X6M1X2M;DP=734;DPB=672.812;DPRA=0;EPP=50.7827;EPPR=226.672;GTI=0;LEN=1;MEANALT=9.66667;MQM=53.1818;MQMR=60;NS=6;NUMALT=7;ODDS=2.22045e-16;PAIRED=0;PAIREDR=0.601942;PAO=0;PQA=0;PQR=0;PRO=0;QA=821;QR=4059;RO=103;RPL=0;RPP=50.7827;RPPR=226.672;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=103;SRP=226.672;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:70:22,14,11,18,0,0,0,4:22:869:14,11,18,0,0,0,4:562,444,678,0,0,0,161:-48.9277,-9.23848,-76.5361,-18.9457,-44.146,-87.1461,0,-25.1975,-34.904,-66.0881,-55.5504,-80.7505,-90.4575,-71.5066,-127.061,-55.5504,-80.7505,-90.4575,-71.5066,-127.061,-127.061,-55.5504,-80.7505,-90.4575,-71.5066,-127.061,-127.061,-127.061,-42.2808,-67.4809,-77.1879,-58.2376,-113.792,-113.792,-113.792,-112.587 1|0:162:11,17,25,27,9,8,0,60:11:424:17,25,27,9,8,0,60:667,999,1019,340,312,0,2369:-240.01,-188.474,-218.169,-161.034,-140.999,-188.321,-160.103,-140.069,-112.629,-186.789,-215.658,-195.624,-168.184,-167.254,-247.762,-217.675,-197.641,-170.201,-169.271,-224.826,-250.08,-243.321,-223.287,-195.847,-194.916,-250.472,-252.489,-278.134,-48.4036,-28.3687,-0.927191,0,-55.5544,-57.571,-83.2171,-65.1553 0|0:148:20,21,41,21,7,14,0,21:20:790:21,41,21,7,14,0,21:813,1627,779,254,550,0,849:-132.908,-72.1572,-130.84,-4.99556,-3.22895,-57.6587,-75.1907,-73.4238,-6.26327,-133.873,-118.575,-116.808,-49.6477,-119.841,-181.472,-93.6932,-91.9262,-24.765,-94.9596,-138.344,-154.483,-138.929,-137.162,-70.0009,-140.195,-183.579,-158.698,-203.933,-68.929,-67.1621,0,-70.1957,-113.58,-88.6982,-133.934,-127.612 0|0:135:3,31,12,13,6,14,0,45:3:119:31,12,13,6,14,0,45:1211,483,490,227,536,0,1809:-237.924,-139.284,-139.748,-199.018,-109.271,-205.202,-198.672,-108.926,-168.66,-204.554,-220.218,-130.471,-190.205,-189.859,-228.208,-194.845,-105.099,-164.833,-164.487,-186.033,-200.427,-238.827,-149.08,-208.814,-208.468,-230.014,-204.641,-248.623,-89.7488,0,-59.7354,-59.3903,-80.9362,-55.5635,-99.5452,-85.9988 1|0:127:26,0,0,54,0,0,11,35:26:1023:0,0,54,0,0,11,35:0,0,2023,0,0,442,1417:-190.545,-198.372,-282.522,-198.372,-282.522,-282.522,-32.6956,-116.841,-116.841,-100.585,-198.372,-282.522,-282.522,-116.841,-282.522,-198.372,-282.522,-282.522,-116.841,-282.522,-282.522,-161.948,-246.099,-246.099,-80.4185,-246.099,-246.099,-242.787,-81.5264,-165.679,-165.679,0,-165.679,-165.679,-129.255,-155.143 0|1:92:21,0,0,39,0,0,16,10:21:834:0,0,39,0,0,16,10:0,0,1472,0,0,635,407:-114.315,-120.637,-189.299,-120.637,-189.299,-189.299,0,-68.6595,-68.6595,-56.9194,-120.637,-189.299,-189.299,-68.6595,-189.299,-120.637,-189.299,-189.299,-68.6595,-189.299,-189.299,-68.3648,-137.029,-137.029,-16.3911,-137.029,-137.029,-132.212,-87.0597,-155.723,-155.723,-35.0839,-155.723,-155.723,-103.452,-152.713 dDocent_Contig_7296 149 . G A 38.2062 . AB=0.142857;ABP=34.0313;AC=2;AF=0.166667;AN=12;AO=4;CIGAR=1X;DP=137;DPB=137;DPRA=0.513761;EPP=11.6962;EPPR=291.816;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.819549;PAO=0;PQA=0;PQR=0;PRO=0;QA=163;QR=5268;RO=133;RPL=4;RPP=11.6962;RPPR=291.816;RPR=0;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=291.816;SRR=133;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1121:0:0:0,-8.42884,-101.176 0/0:20:20,0:20:790:0:0:0,-6.0206,-71.4215 0/0:20:20,0:20:804:0:0:0,-6.0206,-72.6796 0/0:41:41,0:41:1601:0:0:0,-12.3422,-144.329 0/1:13:11,2:11:438:2:82:-3.86629,0,-35.8617 0/1:15:13,2:13:514:2:81:-3.17028,0,-42.0908 dDocent_Contig_7297 55 . G T 120.375 . AB=0.110294;ABP=182.412;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=269;DPB=269;DPRA=3.45588;EPP=46.4397;EPPR=543.707;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.991968;PAO=0;PQA=0;PQR=0;PRO=0;QA=802;QR=9778;RO=249;RPL=20;RPP=46.4397;RPPR=543.707;RPR=0;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=249;SRP=543.707;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:40:33,7:33:1321:7:277:-13.2573,0,-107.116 0/0:63:59,4:59:2299:4:163:0,-3.90646,-192.019 0/0:27:27,0:27:1062:0:0:0,-8.12781,-95.868 0/1:96:88,8:88:3466:8:322:-0.449471,0,-283.08 0/0:7:7,0:7:231:0:0:0,-2.10721,-21.1047 0/0:36:35,1:35:1399:1:40:0,-6.8414,-122.171 dDocent_Contig_7299 72 . C G 4374.63 . AB=0.466667;ABP=4.02365;AC=4;AF=0.333333;AN=12;AO=49;CIGAR=1X3M1X;DP=145;DPB=145;DPRA=1.3125;EPP=109.412;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=0;NS=6;NUMALT=2;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1698;QR=0;RO=0;RPL=49;RPP=109.412;RPPR=0;RPR=0;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:30:0,19,11:0:0:19,11:656,402:-86.4994,-33.2141,-27.4946,-53.6432,0,-50.3318 1|0:29:0,17,12:0:0:17,12:572,431:-81.848,-35.5168,-30.3993,-46.6808,0,-43.0684 1|0:18:0,7,11:0:0:7,11:248,423:-55.3038,-35.1124,-33.0052,-20.5572,0,-17.2459 1|0:28:0,6,22:0:0:6,22:222,836:-87.0996,-68.9398,-67.1336,-18.5318,0,-11.9091 0|0:24:0,0,24:0:0:0,24:0,896:-80.9543,-80.9543,-80.9543,-7.22472,-7.22472,0 0|0:16:0,0,16:0:0:0,16:0,585:-52.9794,-52.9794,-52.9794,-4.81648,-4.81648,0 dDocent_Contig_7300 37 . G T 601.273 . AB=0.4;ABP=7.78754;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X;DP=224;DPB=224;DPRA=0.650888;EPP=50.7827;EPPR=415.977;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.985149;PAO=0;PQA=0;PQR=0;PRO=0;QA=880;QR=7992;RO=202;RPL=0;RPP=50.7827;RPPR=441.648;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=199;SRP=415.977;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1327:0:0:0,-9.93399,-119.692 0/0:39:39,0:39:1548:0:0:0,-11.7402,-139.554 0/0:49:49,0:49:1915:0:0:0,-14.7505,-172.559 0/0:48:48,0:48:1899:0:0:0,-14.4494,-171.106 0/1:44:29,15:29:1154:15:603:-41.3625,0,-90.8967 0/1:11:4,7:4:149:7:277:-21.9866,0,-10.4559 dDocent_Contig_7301 45 . G A 15969.1 . AB=0.530151;ABP=9.29557;AC=5;AF=0.416667;AN=12;AO=554;CIGAR=1X;DP=1316;DPB=1316;DPRA=0;EPP=1206.01;EPPR=1655.5;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998686;PAO=0;PQA=0;PQR=0;PRO=0;QA=21173;QR=28572;RO=761;RPL=0;RPP=1206.01;RPPR=1655.5;RPR=554;RUN=1;SAF=554;SAP=1206.01;SAR=0;SRF=761;SRP=1655.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:210:204,6:204:7673:6:237:0,-41.5146,-668.607 0/0:176:173,2:173:6542:2:80:0,-45.2683,-581.111 0/1:164:133,31:133:4926:31:1191:-58.0891,0,-393.923 0/1:225:165,60:165:6172:60:2309:-140.264,0,-487.598 0/1:407:76,331:76:2874:331:12652:-1015.45,0,-136.272 1/1:134:10,124:10:385:124:4704:-388.32,-5.33569,0 dDocent_Contig_7302 10 . A G 18402.2 . AB=0.540582;ABP=12.3513;AC=8;AF=0.666666;AN=12;AO=556;CIGAR=1X4M;DP=879;DPB=879;DPRA=0;EPP=1210.35;EPPR=482.906;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.986425;PAO=0;PQA=0;PQR=0;PRO=0;QA=22130;QR=8389;RO=221;RPL=0;RPP=1210.35;RPPR=482.906;RPR=556;RUN=1;SAF=556;SAP=1210.35;SAR=0;SRF=221;SRP=482.906;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:71:32,14,25:32:1219:14,25:527,994:-72.2129,-38.6727,-134.435,0,-56.8101,-92.4636 0|1:72:39,16,17:39:1470:16,17:588,686:-44.8268,-8.51429,-124.137,0,-72.3974,-115.347 0|1:148:70,8,69:70:2667:8,69:308,2726:-203.222,-199.006,-415.356,0,-193.472,-197.991 0|1:112:63,15,33:63:2382:15,33:566,1304:-88.3449,-60.9298,-251.653,0,-148.865,-185.316 1|1:226:4,18,203:4:149:18,203:673,8138:-718.176,-664.274,-671.051,-48.9128,-6.00566,0 1|1:250:13,28,209:13:502:28,209:1052,8282:-722.657,-640.388,-673.187,-44.9458,0,-23.2616 dDocent_Contig_7305 36 . C A 7143.13 . AB=0.72956;ABP=148.567;AC=5;AF=0.416667;AN=12;AO=232;CIGAR=1X;DP=354;DPB=354;DPRA=1.76667;EPP=506.792;EPPR=267.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9016;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.983607;PAO=0;PQA=0;PQR=0;PRO=0;QA=9091;QR=4882;RO=122;RPL=0;RPP=506.792;RPPR=267.93;RPR=232;RUN=1;SAF=232;SAP=506.792;SAR=0;SRF=122;SRP=267.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:78:12,66:12:470:66:2579:-208.778,0,-19.1622 0/1:61:19,42:19:767:42:1664:-131.628,0,-50.9662 0/1:45:18,27:18:711:27:1045:-80.7932,0,-50.7641 0/1:82:12,70:12:475:70:2721:-220.329,0,-18.4161 0/0:36:36,0:36:1464:0:0:0,-10.8371,-132.001 0/1:52:25,27:25:995:27:1082:-82.0069,0,-74.1889 dDocent_Contig_7306 22 . C A 568.899 . AB=0.245098;ABP=60.5756;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=1X;DP=478;DPB=478;DPRA=1.35638;EPP=57.2971;EPPR=986.687;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997792;PAO=0;PQA=0;PQR=0;PRO=0;QA=987;QR=18161;RO=453;RPL=0;RPP=57.2971;RPPR=986.687;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=453;SRP=986.687;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:40,0:40:1585:0:0:0,-12.0412,-142.884 0/1:102:77,25:77:3085:25:987:-58.4127,0,-247.02 0/0:66:66,0:66:2638:0:0:0,-19.868,-237.541 0/0:102:102,0:102:4085:0:0:0,-30.7051,-367.613 0/0:98:98,0:98:3956:0:0:0,-29.5009,-356.014 0/0:70:70,0:70:2812:0:0:0,-21.0721,-253.18 dDocent_Contig_7307 12 . T C 604.587 . AB=0.102941;ABP=189.246;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=3X7M;DP=203;DPB=197.4;DPRA=1.01493;EPP=33.4109;EPPR=339.589;GTI=0;LEN=1;MEANALT=2.75;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=560;QR=6107;RO=155;RPL=0;RPP=33.4109;RPPR=339.589;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=155;SRP=339.589;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:40:24,0,12,4:24:947:0,12,4:0,454,161:-29.9686,-37.1933,-115.116,0,-77.9098,-74.2975,-23.9186,-101.846,-64.64,-100.642 0|1:38:29,0,4,5:29:1152:0,4,5:0,140,200:-7.77263,-16.5025,-111.359,-5.13731,-99.9766,-98.7724,0,-94.8829,-83.5013,-93.3778 0|0:18:13,2,1,1:13:520:2,1,1:71,40,41:-1.85093,0,-42.2309,-2.46525,-39.5379,-45.0151,-2.37378,-39.4483,-41.9311,-44.9255 0|0:40:24,0,11,4:24:944:0,11,4:0,427,158:-27.8904,-35.1151,-112.775,0,-77.6936,-74.3822,-22.1064,-99.7731,-64.6905,-98.5689 0|0:16:16,0,0,0:16:628:0,0,0:0,0,0:0,-4.81648,-56.8554,-4.81648,-56.8554,-56.8554,-4.81648,-56.8554,-56.8554,-56.8554 0|0:51:49,0,0,0:49:1916:0,0,0:0,0,0:0,-14.7505,-172.253,-14.7505,-172.253,-172.253,-14.7505,-172.253,-172.253,-172.253 dDocent_Contig_7308 28 . T G 60.8478 . AB=0.181818;ABP=22.3561;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=187;DPB=187;DPRA=0.666667;EPP=11.6962;EPPR=400.39;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.989071;PAO=0;PQA=0;PQR=0;PRO=0;QA=154;QR=7287;RO=183;RPL=0;RPP=11.6962;RPPR=400.39;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=183;SRP=400.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:13:13,0:13:524:0:0:0,-3.91339,-47.5067 0/0:21:21,0:21:813:0:0:0,-6.32163,-73.4821 0/1:22:18,4:18:731:4:154:-7.60766,0,-59.4912 0/0:24:24,0:24:961:0:0:0,-7.22472,-86.7903 0/0:51:51,0:51:2024:0:0:0,-15.3525,-182.344 0/0:56:56,0:56:2234:0:0:0,-16.8577,-201.226 dDocent_Contig_7309 8 . T G 288.134 . AB=0.151724;ABP=155.777;AC=3;AF=0.25;AN=12;AO=23;CIGAR=1X;DP=261;DPB=261;DPRA=1.17308;EPP=52.9542;EPPR=519.821;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.434783;PAIREDR=0.487395;PAO=0;PQA=0;PQR=0;PRO=0;QA=890;QR=9168;RO=238;RPL=0;RPP=52.9542;RPPR=519.821;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=238;SRP=519.821;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1081:0:0:0,-8.42884,-97.5956 0/1:77:67,10:67:2592:10:386:-11.9173,0,-210.291 0/1:24:19,5:19:737:5:192:-10.4253,0,-59.4364 0/1:44:37,7:37:1416:7:273:-11.6927,0,-114.474 0/0:50:50,0:50:1915:0:0:0,-15.0515,-172.589 0/0:38:37,1:37:1427:1:39:0,-7.54258,-124.811 dDocent_Contig_7310 7 . T C 501.159 . AB=0.0322581;ABP=120.83;AC=0;AF=0;AN=12;AO=2;CIGAR=1M1X1M1X2M1X3M3X2M3X2M1I2M1X;DP=266;DPB=272.435;DPRA=1.49398;EPP=7.35324;EPPR=448.162;GTI=0;LEN=1;MEANALT=5;MQM=33;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=40;PRO=57;QA=80;QR=8034;RO=205;RPL=0;RPP=7.35324;RPPR=448.162;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=205;SRP=448.162;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:38:33,0,0:33:1290:0,0:0,0:0,-9.93399,-116.221,-9.93399,-116.221,-116.221 0|0:56:50,0,1:50:1951:0,1:0,39:0,-15.0515,-175.593,-11.8279,-172.386,-172.085 0|0:13:13,0,0:13:512:0,0:0,0:0,-3.91339,-46.3187,-3.91339,-46.3187,-46.3187 0|0:59:52,0,0:52:2043:0,0:0,0:0,-15.6536,-183.872,-15.6536,-183.872,-183.872 0|0:38:24,0,8:24:939:0,8:0,315:-18.7786,-26.0033,-103.298,0,-77.3648,-74.9566 0|0:62:33,2,14:33:1299:2,14:80,541:-34.5592,-39.2944,-145.615,0,-101.769,-102.751 dDocent_Contig_7311 9 . T A 297.821 . AB=0.342857;ABP=10.5174;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=366;DPB=366;DPRA=0.528701;EPP=29.068;EPPR=769.54;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.994334;PAO=0;PQA=0;PQR=0;PRO=0;QA=461;QR=13590;RO=353;RPL=0;RPP=29.068;RPPR=769.54;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=353;SRP=769.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:112:111,0:111:4272:0:0:0,-33.4143,-384.156 0/0:48:48,0:48:1852:0:0:0,-14.4494,-166.928 0/0:47:47,0:47:1803:0:0:0,-14.1484,-162.515 0/0:122:122,0:122:4702:0:0:0,-36.7257,-423.216 0/1:35:23,12:23:884:12:461:-31.3048,0,-69.343 0/0:2:2,0:2:77:0:0:0,-0.60206,-7.30914 dDocent_Contig_7312 13 . A G 984.351 . AB=0.140065;ABP=348.472;AC=3;AF=0.25;AN=12;AO=48;CIGAR=1M1X13M;DP=384;DPB=384.6;DPRA=0;EPP=107.241;EPPR=606.68;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1942;QR=10890;RO=278;RPL=0;RPP=107.241;RPPR=606.68;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=278;SRP=606.68;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:65:46,5,4,0,10:46:1808:5,4,0,10:196,163,0,403:-19.3718,-17.1046,-164.303,-19.7702,-152.36,-167.273,-33.2192,-165.808,-168.477,-181.925,0,-132.589,-135.259,-148.707,-145.697 0|1:63:24,16,7,2,14:24:954:16,7,2,14:647,224,82,566:-46.1288,0,-73.7393,-35.333,-60.5321,-111.769,-46.5842,-71.7867,-107.108,-124.532,-6.68069,-31.8846,-67.2109,-78.466,-81.0207 0|0:49:28,2,10,0,7:28:1097:2,10,0,7:81,400,0,283:-24.5186,-26.2681,-115.864,0,-83.515,-87.1844,-32.9475,-116.466,-90.1947,-123.146,-9.61477,-93.1327,-66.8608,-99.8123,-97.7051 0|0:51:38,1,1,7,4:38:1482:1,1,7,4:41,40,285,164:-12.0708,-20.1257,-141.625,-20.2155,-138.63,-141.714,0,-118.413,-118.502,-119.69,-9.97259,-128.388,-128.477,-108.259,-130.568 0|0:77:71,0,0,0,5:71:2795:0,0,0,5:0,0,0,204:0,-21.3731,-251.312,-21.3731,-251.312,-251.312,-21.3731,-251.312,-251.312,-251.312,-4.41048,-234.479,-234.479,-234.479,-232.974 0|1:79:71,0,0,0,8:71:2754:0,0,0,8:0,0,0,322:-5.56698,-26.9401,-253.179,-26.9401,-253.179,-253.179,-26.9401,-253.179,-253.179,-253.179,0,-226.64,-226.64,-226.64,-224.232 dDocent_Contig_7313 21 . A T 1625.33 . AB=0.279835;ABP=105.32;AC=6;AF=0.5;AN=12;AO=68;CIGAR=3X;DP=243;DPB=243;DPRA=0;EPP=150.67;EPPR=380.846;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.808824;PAIREDR=0.942529;PAO=0;PQA=0;PQR=0;PRO=0;QA=2721;QR=6739;RO=174;RPL=0;RPP=150.67;RPPR=380.846;RPR=68;RUN=1;SAF=68;SAP=150.67;SAR=0;SRF=174;SRP=380.846;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:29:24,5:24:930:5:201:-9.74123,0,-75.2753 0|1:44:26,18:26:982:18:726:-52.4208,0,-75.4353 0|1:37:29,8:29:1111:8:324:-18.3913,0,-89.145 0|1:24:20,4:20:777:4:161:-7.65055,0,-63.0273 0|1:40:27,12:27:1060:12:470:-30.4966,0,-83.5506 0|1:69:48,21:48:1879:21:839:-55.0543,0,-148.565 dDocent_Contig_7314 13 . C T 2035.28 . AB=0.239892;ABP=221.03;AC=4;AF=0.333333;AN=12;AO=91;CIGAR=1X;DP=467;DPB=467;DPRA=1.63137;EPP=200.614;EPPR=502.195;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.7766;NS=6;NUMALT=1;ODDS=0;PAIRED=0.989011;PAIREDR=0.75266;PAO=0;PQA=0;PQR=0;PRO=0;QA=3650;QR=14639;RO=376;RPL=0;RPP=200.614;RPPR=819.484;RPR=91;RUN=1;SAF=91;SAP=200.614;SAR=0;SRF=335;SRP=502.195;SRR=41;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:78:48,30:48:1885:30:1212:-85.8706,0,-146.382 0/1:71:54,17:54:2028:17:682:-40.3332,0,-161.351 0/1:94:75,19:75:2929:19:757:-40.1544,0,-235.403 0/1:128:105,23:105:4128:23:918:-44.3917,0,-332.646 0/0:51:51,0:51:1992:0:0:0,-15.3525,-179.468 0/0:45:43,2:43:1677:2:81:0,-5.86062,-143.402 dDocent_Contig_7315 10 . A T 176.331 . AB=0.0481013;ABP=703.648;AC=0;AF=0;AN=12;AO=28;CIGAR=1M3I3M1X4M1X1M3X4M1X4M;DP=657;DPB=675.913;DPRA=0;EPP=63.8115;EPPR=754.34;GTI=0;LEN=1;MEANALT=24;MQM=57.3214;MQMR=59.9798;NS=6;NUMALT=10;ODDS=0;PAIRED=1;PAIREDR=0.982659;PAO=0;PQA=0;PQR=0;PRO=0;QA=1075;QR=13600;RO=346;RPL=0;RPP=63.8115;RPPR=754.34;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=346;SRP=754.34;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:75:35,2,3,0,2,3,1,3,0,1,4:35:1377:2,3,0,2,3,1,3,0,1,4:77,102,0,66,113,39,94,0,27,158:-2.47048,-6.95615,-119.649,-5.5454,-112.789,-117.936,-13.0065,-120.251,-118.839,-126.3,-7.6719,-114.917,-113.504,-120.966,-120.364,-3.74456,-110.991,-109.579,-117.04,-111.706,-116.137,-9.79963,-117.045,-115.632,-123.094,-117.76,-113.834,-122.793,-5.47704,-112.721,-111.309,-118.77,-113.436,-109.51,-115.564,-117.867,-13.0065,-120.251,-118.839,-126.3,-120.966,-117.04,-123.094,-118.77,-126.3,-10.8798,-118.124,-116.711,-124.173,-118.839,-114.913,-120.967,-116.643,-124.173,-123.872,0,-107.248,-105.836,-113.298,-107.963,-104.037,-110.091,-105.767,-113.298,-111.17,-112.093 0|0:122:65,2,3,6,3,6,2,4,3,1,1:65:2569:2,3,6,3,6,2,4,3,1,1:80,105,228,112,233,78,140,114,38,37:0,-12.9835,-223.791,-11.3106,-216.136,-221.816,-0.868196,-205.696,-204.021,-210.472,-10.3968,-215.223,-213.549,-203.109,-220.903,-0.44327,-205.271,-203.597,-193.156,-202.684,-210.048,-13.1546,-217.981,-216.307,-205.867,-215.394,-205.442,-223.962,-8.20485,-213.031,-211.356,-200.916,-210.444,-200.491,-213.202,-218.409,-10.2401,-215.067,-213.393,-202.952,-212.48,-202.528,-215.238,-210.287,-220.747,-16.4576,-221.284,-219.61,-209.169,-218.697,-208.745,-221.455,-216.504,-218.541,-227.566,-16.54,-221.366,-219.692,-209.252,-218.779,-208.827,-221.537,-216.587,-218.623,-224.84,-227.648 0|0:110:48,1,4,0,0,3,2,6,0,1,4:48:1881:1,4,0,0,3,2,6,0,1,4:36,128,0,0,120,72,224,0,37,152:-3.8471,-15.629,-170.018,-8.85516,-160.876,-162.339,-18.2965,-170.319,-163.543,-172.986,-18.2965,-170.319,-163.543,-172.986,-172.986,-8.5131,-160.536,-153.761,-163.204,-163.204,-162.301,-12.4226,-164.445,-157.67,-167.113,-167.113,-157.33,-166.511,0,-152.023,-145.248,-154.691,-154.691,-144.909,-148.817,-152.885,-18.2965,-170.319,-163.543,-172.986,-172.986,-163.204,-167.113,-154.691,-172.986,-15.2694,-167.292,-160.516,-169.959,-169.959,-160.177,-164.086,-151.664,-169.959,-169.658,-5.83148,-157.855,-151.079,-160.522,-160.522,-150.74,-154.649,-142.227,-160.522,-157.495,-159.318 0|0:140:96,0,2,1,1,3,3,2,2,0,0:96:3757:0,2,1,1,3,3,2,2,0,0:0,68,39,40,120,117,77,78,0,0:0,-28.8989,-337.83,-23.9253,-332.855,-332.253,-25.6924,-334.624,-329.649,-334.323,-25.603,-334.535,-329.559,-331.329,-334.234,-19.0339,-327.967,-322.992,-324.761,-324.672,-327.064,-19.2794,-328.212,-323.237,-325.006,-324.917,-318.349,-327.309,-22.5919,-331.524,-326.549,-328.318,-328.228,-321.661,-321.906,-330.922,-22.5041,-331.436,-326.461,-328.23,-328.141,-321.573,-321.818,-325.13,-330.834,-28.8989,-337.83,-332.855,-334.624,-334.535,-327.967,-328.212,-331.524,-331.436,-337.83,-28.8989,-337.83,-332.855,-334.624,-334.535,-327.967,-328.212,-331.524,-331.436,-337.83,-337.83 0|0:106:45,9,0,1,2,7,4,0,0,2,2:45:1777:9,0,1,2,7,4,0,0,2,2:353,0,37,74,276,152,0,0,75,80:-15.4622,0,-143.528,-29.0086,-146.237,-175.243,-25.9816,-143.21,-172.216,-171.915,-22.9546,-140.183,-169.189,-166.162,-168.587,-6.33842,-123.569,-152.575,-149.548,-146.521,-150.468,-16.5422,-133.771,-162.777,-159.75,-156.723,-140.109,-161.573,-29.0086,-146.237,-175.243,-172.216,-169.189,-152.575,-162.777,-175.243,-29.0086,-146.237,-175.243,-172.216,-169.189,-152.575,-162.777,-175.243,-175.243,-22.8779,-140.107,-169.113,-166.086,-163.059,-146.445,-156.647,-169.113,-169.113,-168.51,-22.4174,-139.647,-168.652,-165.625,-162.599,-145.984,-156.187,-168.652,-168.652,-162.522,-168.05 0|0:104:57,6,1,3,2,6,0,2,0,4,3:57:2239:6,1,3,2,6,0,2,0,4,3:245,39,115,77,213,0,78,0,155,112:-3.04377,0,-182.358,-17.0056,-180.968,-200.867,-10.7638,-174.726,-191.729,-194.023,-13.8804,-177.842,-194.846,-188.604,-197.441,-2.85959,-166.819,-183.823,-177.581,-180.698,-185.213,-20.2025,-184.164,-201.168,-194.926,-198.043,-187.02,-204.365,-13.8087,-177.771,-194.774,-188.532,-191.649,-180.626,-197.971,-197.369,-20.2025,-184.164,-201.168,-194.926,-198.043,-187.02,-204.365,-197.971,-204.365,-7.49351,-171.456,-188.459,-182.217,-185.334,-174.311,-191.656,-185.262,-191.656,-190.452,-11.0335,-174.995,-191.999,-185.757,-188.873,-177.85,-195.195,-188.802,-195.195,-182.487,-194.292 dDocent_Contig_7316 17 . T C 759.704 . AB=0.210526;ABP=127.47;AC=3;AF=0.25;AN=12;AO=40;CIGAR=1X;DP=399;DPB=399;DPRA=0.653179;EPP=89.8692;EPPR=782.569;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1615;QR=14402;RO=359;RPL=0;RPP=89.8692;RPPR=782.569;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=359;SRP=782.569;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:59:54,5:54:2173:5:205:-1.07424,0,-177.969 0/0:74:74,0:74:3000:0:0:0,-22.2762,-270.071 0/1:36:29,7:29:1159:7:285:-15.1873,0,-93.7467 0/1:76:52,24:52:2088:24:962:-63.9963,0,-165.222 0/0:55:51,4:51:2065:4:163:0,-1.49822,-170.968 0/0:99:99,0:99:3917:0:0:0,-29.802,-352.514 dDocent_Contig_7317 19 . G A 3592.24 . AB=0.535398;ABP=5.47002;AC=6;AF=0.5;AN=12;AO=121;CIGAR=1X;DP=226;DPB=226;DPRA=0;EPP=265.758;EPPR=231.015;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.991736;PAIREDR=0.971429;PAO=0;PQA=0;PQR=0;PRO=0;QA=4851;QR=4243;RO=105;RPL=0;RPP=265.758;RPPR=231.015;RPR=121;RUN=1;SAF=121;SAP=265.758;SAR=0;SRF=105;SRP=231.015;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:17,13:17:681:13:521:-38.2055,0,-52.5861 0/1:52:17,35:17:685:35:1387:-109.431,0,-46.3249 0/1:26:17,9:17:694:9:353:-24.3036,0,-54.9608 0/1:37:21,16:21:845:16:651:-47.7845,0,-65.2233 0/1:36:11,25:11:448:25:1004:-79.8169,0,-29.8389 0/1:45:22,23:22:890:23:935:-70.9046,0,-66.8597 dDocent_Contig_7318 10 . T A 346.701 . AB=0.133603;ABP=291.025;AC=3;AF=0.25;AN=12;AO=44;CIGAR=1X;DP=513;DPB=513;DPRA=0;EPP=98.5551;EPPR=1021.43;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.340909;PAIREDR=0.394456;PAO=0;PQA=0;PQR=0;PRO=0;QA=1682;QR=18066;RO=469;RPL=0;RPP=98.5551;RPPR=1021.43;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=469;SRP=1021.43;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:99:90,9:90:3511:9:347:-1.78399,0,-286.275 0/1:98:82,16:82:3114:16:602:-25.0066,0,-250.901 0/1:50:42,8:42:1609:8:306:-12.8434,0,-130.018 0/0:91:85,6:85:3286:6:232:0,-6.14636,-274.607 0/0:82:81,1:81:3101:1:40:0,-20.6888,-275.233 0/0:93:89,4:89:3445:4:155:0,-13.6723,-295.819 dDocent_Contig_7319 47 . T G 2926.4 . AB=0.293827;ABP=152.542;AC=5;AF=0.416667;AN=12;AO=120;CIGAR=1X;DP=477;DPB=477;DPRA=0;EPP=263.587;EPPR=778.226;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.916667;PAIREDR=0.854342;PAO=0;PQA=0;PQR=0;PRO=0;QA=4733;QR=14189;RO=357;RPL=0;RPP=263.587;RPPR=778.226;RPR=120;RUN=1;SAF=120;SAP=263.587;SAR=0;SRF=357;SRP=778.226;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:65:55,10:55:2187:10:396:-16.4288,0,-177.425 0/1:107:75,32:75:2984:32:1256:-81.0996,0,-236.44 0/1:67:48,19:48:1924:19:761:-48.6409,0,-153.189 0/1:87:47,40:47:1838:40:1568:-115.166,0,-139.425 0/0:72:71,1:71:2823:1:41:0,-17.5796,-250.085 0/1:79:61,18:61:2433:18:711:-40.5269,0,-195.33 dDocent_Contig_7322 1 . N G 97.967 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=105;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:105:-9.79616,-0.90309,0 ./.:.:.:.:.:.:.:. dDocent_Contig_7323 18 . T A 73.8875 . AB=0.136364;ABP=53.5464;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=197;DPB=197;DPRA=1.43791;EPP=16.0391;EPPR=417.762;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.712042;PAO=0;PQA=0;PQR=0;PRO=0;QA=242;QR=7684;RO=191;RPL=0;RPP=16.0391;RPPR=417.762;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=191;SRP=417.762;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:1010:0:0:0,-7.52575,-91.194 0/0:27:27,0:27:1078:0:0:0,-8.12781,-97.307 0/0:22:22,0:22:896:0:0:0,-6.62266,-80.945 0/1:44:38,6:38:1532:6:242:-8.91163,0,-124.871 0/0:38:38,0:38:1532:0:0:0,-11.4391,-138.115 0/0:41:41,0:41:1636:0:0:0,-12.3422,-147.468 dDocent_Contig_7324 127 . T C 1104.49 . AB=0.409091;ABP=10.9066;AC=5;AF=0.416667;AN=12;AO=45;CIGAR=1X;DP=120;DPB=120;DPRA=2.2;EPP=100.727;EPPR=148.962;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.777778;PAIREDR=0.733333;PAO=0;PQA=0;PQR=0;PRO=0;QA=1678;QR=2824;RO=75;RPL=45;RPP=100.727;RPPR=148.962;RPR=0;RUN=1;SAF=0;SAP=100.727;SAR=45;SRF=0;SRP=165.871;SRR=75;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:17,6:17:648:6:223:-13.5038,0,-51.7271 0/1:17:15,2:15:574:2:79:-2.37973,0,-46.8794 0/0:10:10,0:10:383:0:0:0,-3.0103,-34.8222 0/1:9:7,2:7:283:2:68:-3.74815,0,-23.1341 0/1:38:16,22:16:569:22:797:-60.595,0,-40.0869 0/1:23:10,13:10:367:13:511:-39.4137,0,-26.4426 dDocent_Contig_7325 94 . T A 2137.55 . AB=0.551724;ABP=4.35811;AC=3;AF=0.25;AN=12;AO=76;CIGAR=1X;DP=343;DPB=343;DPRA=0.846473;EPP=168.042;EPPR=582.793;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2576;QR=9169;RO=267;RPL=76;RPP=168.042;RPPR=582.793;RPR=0;RUN=1;SAF=76;SAP=168.042;SAR=0;SRF=267;SRP=582.793;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:46:46,0:46:1573:0:0:0,-13.8474,-141.862 0/0:92:92,0:92:3168:0:0:0,-27.6948,-285.36 0/0:24:24,0:24:792:0:0:0,-7.22472,-71.5859 0/0:79:79,0:79:2732:0:0:0,-23.7814,-246.135 1/1:44:0,44:0:0:44:1506:-135.833,-13.2453,0 0/1:58:26,32:26:904:32:1070:-79.143,0,-64.2173 dDocent_Contig_7326 1 . N G 74.9833 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=79;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:79:-7.49724,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_7327 1 . N G 554.915 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=18;CIGAR=1X;DP=18;DPB=18;DPRA=0;EPP=42.0968;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=591;QR=0;RO=0;RPL=0;RPP=42.0968;RPPR=0;RPR=18;RUN=1;SAF=0;SAP=42.0968;SAR=18;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:95:-8.86398,-0.90309,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:8:0,8:0:0:8:279:-25.449,-2.40824,0 1/1:3:0,3:0:0:3:77:-7.18411,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 dDocent_Contig_7328 26 . C T 1951.09 . AB=0.447205;ABP=6.90816;AC=5;AF=0.416667;AN=12;AO=74;CIGAR=1X;DP=185;DPB=185;DPRA=0;EPP=163.699;EPPR=244.044;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.459459;PAIREDR=0.513514;PAO=0;PQA=0;PQR=0;PRO=0;QA=2863;QR=4422;RO=111;RPL=0;RPP=163.699;RPPR=244.044;RPR=74;RUN=1;SAF=74;SAP=163.699;SAR=0;SRF=111;SRP=244.044;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:28,13:28:1115:13:511:-33.9965,0,-88.2984 0/1:32:21,11:21:837:11:421:-28.6093,0,-66.0133 0/1:28:9,19:9:352:19:753:-59.6673,0,-23.6121 0/1:36:22,14:22:875:14:532:-37.3747,0,-68.2234 0/0:24:22,2:22:881:2:73:0,-0.294646,-72.6716 0/1:24:9,15:9:362:15:573:-44.6828,0,-25.7193 dDocent_Contig_7329 26 . G A 18960.7 . AB=0.386803;ABP=198.67;AC=5;AF=0.416667;AN=12;AO=701;CIGAR=1X;DP=2072;DPB=2072;DPRA=0;EPP=1525.21;EPPR=2977.93;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99854;PAO=0;PQA=0;PQR=0;PRO=0;QA=27903;QR=54314;RO=1370;RPL=0;RPP=1525.21;RPPR=2977.93;RPR=701;RUN=1;SAF=701;SAP=1525.21;SAR=0;SRF=1370;SRP=2977.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:206:181,25:181:7141:25:989:-27.2955,0,-580.355 0/1:318:285,33:285:11353:33:1332:-24.4126,0,-925.278 0/1:351:300,51:300:11920:51:2037:-77.8578,0,-966.29 0/0:314:293,21:293:11520:21:843:0,-18.3414,-959.85 0/1:454:172,282:172:6842:282:11234:-873.646,0,-478.814 0/1:429:139,289:139:5538:289:11468:-902.083,0,-368.992 dDocent_Contig_7330 18 . G T 509.906 . AB=0.154545;ABP=231.054;AC=5;AF=0.416667;AN=12;AO=36;CIGAR=1X;DP=253;DPB=253;DPRA=0;EPP=81.1833;EPPR=474.22;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.694444;PAIREDR=0.59447;PAO=0;PQA=0;PQR=0;PRO=0;QA=1465;QR=8633;RO=217;RPL=0;RPP=81.1833;RPPR=474.22;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=217;SRP=474.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:33,4:33:1306:4:164:-4.01179,0,-106.669 0/0:33:31,2:31:1218:2:81:0,-2.24826,-102.202 0/1:31:27,4:27:1077:4:162:-5.63503,0,-87.8884 0/1:60:47,13:47:1869:13:526:-29.6247,0,-150.35 0/1:50:43,7:43:1716:7:286:-11.0633,0,-139.604 0/1:42:36,6:36:1447:6:246:-9.87686,0,-117.832 dDocent_Contig_7331 71 . G T 1427.5 . AB=0.351955;ABP=37.0866;AC=3;AF=0.25;AN=12;AO=64;CIGAR=1X;DP=275;DPB=275;DPRA=1.46429;EPP=141.985;EPPR=461.191;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.5166;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990521;PAO=0;PQA=0;PQR=0;PRO=0;QA=2268;QR=7440;RO=211;RPL=64;RPP=141.985;RPPR=461.191;RPR=0;RUN=1;SAF=64;SAP=141.985;SAR=0;SRF=211;SRP=461.191;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:18,20:18:645:20:712:-52.9679,0,-41.1521 0/1:76:44,32:44:1556:32:1128:-78.9508,0,-117.455 0/0:26:25,1:25:869:1:36:0,-4.2285,-74.9269 0/1:65:54,11:54:1898:11:392:-16.0533,0,-151.532 0/0:15:15,0:15:532:0:0:0,-4.51545,-48.2133 0/0:55:55,0:55:1940:0:0:0,-16.5566,-174.878 dDocent_Contig_7332 9 . G A 101.592 . AB=0.263158;ABP=12.2676;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=283;DPB=283;DPRA=0.874172;EPP=20.3821;EPPR=600.165;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.894545;PAO=0;PQA=0;PQR=0;PRO=0;QA=302;QR=10465;RO=275;RPL=0;RPP=20.3821;RPPR=600.165;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=275;SRP=600.165;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:14,5:14:544:5:186:-11.3811,0,-43.5866 0/0:51:50,1:50:1884:1:39:0,-11.456,-165.908 0/0:43:43,0:43:1635:0:0:0,-12.9443,-147.414 0/0:62:60,2:60:2273:2:77:0,-11.3547,-197.474 0/0:61:61,0:61:2339:0:0:0,-18.3628,-210.724 0/0:47:47,0:47:1790:0:0:0,-14.1484,-161.353 dDocent_Contig_7333 8 . T G 418.55 . AB=0.231579;ABP=62.4629;AC=2;AF=0.166667;AN=12;AO=32;CIGAR=1X;DP=256;DPB=256;DPRA=0;EPP=72.4974;EPPR=485.077;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.15625;PAIREDR=0.59009;PAO=0;PQA=0;PQR=0;PRO=0;QA=1184;QR=8520;RO=222;RPL=0;RPP=72.4974;RPPR=485.077;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=222;SRP=485.077;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:21,11:21:811:11:413:-27.8829,0,-63.6827 0/0:30:27,2:27:1035:2:69:0,-2.55325,-86.8911 0/0:34:32,2:32:1222:2:74:0,-3.20959,-103.247 0/1:63:52,11:52:2002:11:398:-17.1933,0,-161.452 0/0:47:42,4:42:1606:4:153:0,-0.062101,-130.671 0/0:50:48,2:48:1844:2:77:0,-7.74236,-158.9 dDocent_Contig_7334 58 . A G 446.374 . AB=0.144578;ABP=94.0813;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=3M1X5M;DP=387;DPB=408.778;DPRA=1.48879;EPP=29.068;EPPR=743.482;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.803519;PAO=0;PQA=0;PQR=0;PRO=0;QA=450;QR=11875;RO=341;RPL=6;RPP=3.0103;RPPR=13.7148;RPR=6;RUN=1;SAF=6;SAP=3.0103;SAR=6;SRF=150;SRP=13.7148;SRR=191;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:50:48,0,0:48:1629:0,0:0,0:0,-14.4494,-146.816,-14.4494,-146.816,-146.816 0|0:55:55,0,0:55:1892:0,0:0,0:0,-16.5566,-170.547,-16.5566,-170.547,-170.547 0|0:45:39,4,0:39:1330:4,0:131,0:0,-1.19346,-107.861,-11.7402,-109.065,-119.645 0|0:73:73,0,0:73:2604:0,0:0,0:0,-21.9752,-234.599,-21.9752,-234.599,-234.599 0|1:83:65,6,12:65:2275:6,12:186,450:-17.3367,-21.9965,-205.263,0,-170.205,-181.518 0|0:81:61,18,0:61:2145:18,0:604,0:-30.5224,0,-169.155,-48.8853,-174.573,-223.49 dDocent_Contig_7335 107 . N T 190.607 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=6;CIGAR=1X2M1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=201;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1|1:5:0,5:0:0:5:167:-15.3596,-1.50515,0 dDocent_Contig_7336 46 . C T 66.7657 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=74;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:74:-6.67548,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_7337 58 . A G 38.8238 . AB=0.285714;ABP=5.80219;AC=1;AF=0.1;AN=10;AO=3;CIGAR=1X;DP=321;DPB=321;DPRA=4.83553;EPP=9.52472;EPPR=691.367;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=121;QR=12439;RO=317;RPL=3;RPP=9.52472;RPPR=691.367;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=317;SRP=691.367;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 0/0:9:9,0:9:332:0:0:0,-2.70927,-30.2211 0/1:7:5,2:5:201:2:80:-5.48436,0,-16.3637 0/0:6:6,0:6:227:0:0:0,-1.80618,-20.789 0/0:238:236,1:236:9298:1:41:0,-67.6491,-832.227 0/0:61:61,0:61:2381:0:0:0,-18.3628,-214.464 dDocent_Contig_7338 54 . T C 48.0569 . AB=0.133333;ABP=38.0434;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=310;DPB=310;DPRA=0.761364;EPP=16.0391;EPPR=663.138;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.8125;PAO=0;PQA=0;PQR=0;PRO=0;QA=242;QR=12151;RO=304;RPL=6;RPP=16.0391;RPPR=663.138;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=304;SRP=663.138;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:26,4:26:1043:4:163:-6.02753,0,-85.1328 0/0:77:77,0:77:3073:0:0:0,-23.1793,-276.645 0/0:42:41,1:41:1643:1:38:0,-8.84599,-144.299 0/0:62:61,1:61:2442:1:41:0,-14.5693,-215.826 0/0:43:43,0:43:1697:0:0:0,-12.9443,-152.951 0/0:56:56,0:56:2253:0:0:0,-16.8577,-202.93 dDocent_Contig_7339 23 . T A 33.5983 . AB=0.222222;ABP=9.04217;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=1X;DP=86;DPB=86;DPRA=0.584416;EPP=7.35324;EPPR=185.414;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=80;QR=3397;RO=84;RPL=0;RPP=7.35324;RPPR=185.414;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=84;SRP=185.414;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:407:0:0:0,-3.0103,-36.9906 0/0:8:8,0:8:324:0:0:0,-2.40824,-29.5292 0/0:23:23,0:23:932:0:0:0,-6.92369,-84.18 0/0:12:12,0:12:484:0:0:0,-3.61236,-43.9111 0/1:9:7,2:7:281:2:80:-4.88252,0,-22.9518 0/0:24:24,0:24:969:0:0:0,-7.22472,-87.5068 dDocent_Contig_7340 86 . G A 329.154 . AB=0.231707;ABP=54.2782;AC=1;AF=0.0833333;AN=12;AO=27;CIGAR=1X;DP=467;DPB=467;DPRA=0.769022;EPP=61.6401;EPPR=958.458;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.62963;PAIREDR=0.509091;PAO=0;PQA=0;PQR=0;PRO=0;QA=923;QR=14617;RO=440;RPL=19;RPP=12.7417;RPPR=220.651;RPR=8;RUN=1;SAF=19;SAP=12.7417;SAR=8;SRF=325;SRP=220.651;SRR=115;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:82:63,19:63:2095:19:650:-34.1372,0,-164.136 0/0:85:82,3:82:2688:3:101:0,-16.1638,-232.747 0/0:32:31,1:31:1014:1:33:0,-6.33382,-88.2574 0/0:84:80,4:80:2686:4:139:0,-12.4338,-229.14 0/0:86:86,0:86:2870:0:0:0,-25.8886,-258.546 0/0:98:98,0:98:3264:0:0:0,-29.5009,-293.995 dDocent_Contig_7341 23 . T A 46.4495 . AB=0.138889;ABP=43.7857;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=2X;DP=188;DPB=188;DPRA=1.10744;EPP=18.2106;EPPR=396.047;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.857143;PAIREDR=0.801105;PAO=0;PQA=0;PQR=0;PRO=0;QA=258;QR=7257;RO=181;RPL=0;RPP=18.2106;RPPR=396.047;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=181;SRP=396.047;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:30:30,0:30:1191:0:0:0,-9.0309,-107.463 0|0:22:22,0:22:881:0:0:0,-6.62266,-79.5972 0|0:35:35,0:35:1401:0:0:0,-10.536,-126.341 0|1:36:31,5:31:1249:5:185:-6.16781,0,-101.842 0|0:34:34,0:34:1362:0:0:0,-10.235,-122.84 0|0:31:29,2:29:1173:2:73:0,-2.40274,-98.9166 dDocent_Contig_7342 33 . G A 202.106 . AB=0.146789;ABP=121.126;AC=4;AF=0.333333;AN=12;AO=16;CIGAR=1X;DP=195;DPB=195;DPRA=0.633721;EPP=37.7539;EPPR=391.704;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.625;PAIREDR=0.642458;PAO=0;PQA=0;PQR=0;PRO=0;QA=645;QR=7174;RO=179;RPL=0;RPP=37.7539;RPPR=391.704;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=179;SRP=391.704;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:19,2:19:769:2:81:-1.3641,0,-63.2085 0/0:45:45,0:45:1796:0:0:0,-13.5463,-161.855 0/1:26:23,3:23:931:3:120:-3.36053,0,-76.2646 0/0:41:41,0:41:1657:0:0:0,-12.3422,-149.352 0/1:25:22,3:22:871:3:119:-3.56926,0,-71.1738 0/1:37:29,8:29:1150:8:325:-18.4813,0,-92.642 dDocent_Contig_7343 75 . C T 108.554 . AB=0.195652;ABP=40.0197;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=2X;DP=233;DPB=233;DPRA=1.22995;EPP=3.25157;EPPR=480.773;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9777;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.959821;PAO=0;PQA=0;PQR=0;PRO=0;QA=288;QR=8683;RO=224;RPL=9;RPP=22.5536;RPPR=489.42;RPR=0;RUN=1;SAF=5;SAP=3.25157;SAR=4;SRF=223;SRP=480.773;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:35:35,0:35:1345:0:0:0,-10.536,-121.31 0|0:58:58,0:58:2206:0:0:0,-17.4597,-198.758 0|0:30:30,0:30:1173:0:0:0,-9.0309,-105.851 0|0:34:34,0:34:1354:0:0:0,-10.235,-122.125 0|1:46:37,9:37:1457:9:288:-12.3783,0,-117.541 0|0:30:30,0:30:1148:0:0:0,-9.0309,-103.606 dDocent_Contig_7344 13 . C T 66.9384 . AB=0.171429;ABP=35.8306;AC=3;AF=0.25;AN=12;AO=7;CIGAR=1X;DP=77;DPB=77;DPRA=0.875;EPP=18.2106;EPPR=152.842;GTI=0;LEN=1;MEANALT=1.25;MQM=57.4286;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.857143;PAIREDR=0.869565;PAO=0;PQA=0;PQR=0;PRO=0;QA=281;QR=2771;RO=69;RPL=0;RPP=18.2106;RPPR=152.842;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=69;SRP=152.842;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:21,3:21:832:3:120:-3.56303,0,-67.5686 0/0:17:17,0:17:683:0:0:0,-5.11751,-61.8005 0/1:7:5,2:5:205:2:79:-5.154,0,-16.7278 0/0:14:13,1:13:528:1:41:0,-0.119853,-43.7721 0/0:11:11,0:11:441:0:0:0,-3.31133,-40.0434 0/1:3:2,1:2:82:1:41:-3.19148,0,-6.87659 dDocent_Contig_7345 145 . A G 75.1191 . AB=0.272727;ABP=12.8806;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=62;DPB=62;DPRA=1.1;EPP=16.0391;EPPR=124.613;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.803571;PAO=0;PQA=0;PQR=0;PRO=0;QA=186;QR=1733;RO=56;RPL=0;RPP=16.0391;RPPR=124.613;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=124.613;SRR=56;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:298:0:0:0,-3.0103,-27.1125 0/0:15:15,0:15:482:0:0:0,-4.51545,-43.691 0/0:7:7,0:7:215:0:0:0,-2.10721,-19.6533 0/0:8:8,0:8:234:0:0:0,-2.40824,-21.349 0/1:13:10,3:10:300:3:93:-4.76475,0,-23.3814 0/1:9:6,3:6:204:3:93:-5.96887,0,-15.9846 dDocent_Contig_7348 8 . T G 378.804 . AB=0.128205;ABP=377.617;AC=3;AF=0.25;AN=12;AO=57;CIGAR=1X;DP=590;DPB=590;DPRA=0;EPP=126.784;EPPR=1160.41;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9493;NS=6;NUMALT=1;ODDS=0;PAIRED=0.859649;PAIREDR=0.934334;PAO=0;PQA=0;PQR=0;PRO=0;QA=2137;QR=20432;RO=533;RPL=0;RPP=126.784;RPPR=1160.41;RPR=57;RUN=1;SAF=57;SAP=126.784;SAR=0;SRF=533;SRP=1160.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:88:82,6:82:3147:6:212:0,-7.06695,-263.959 0/0:93:90,3:90:3440:3:108:0,-17.9217,-299.631 0/1:58:51,7:51:1966:7:272:-7.38749,0,-159.718 0/0:97:89,8:89:3396:8:306:0,-1.29945,-277.86 0/1:146:126,20:126:4849:20:738:-22.7877,0,-392.486 0/1:108:95,13:95:3634:13:501:-12.9269,0,-294.668 dDocent_Contig_7349 11 . G A 8380.29 . AB=0.685811;ABP=180.543;AC=6;AF=0.5;AN=12;AO=406;CIGAR=1X;DP=592;DPB=592;DPRA=0;EPP=884.628;EPPR=406.904;GTI=0;LEN=1;MEANALT=1;MQM=37.2365;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.472906;PAIREDR=0.430108;PAO=0;PQA=0;PQR=0;PRO=0;QA=15913;QR=7271;RO=186;RPL=0;RPP=884.628;RPPR=406.904;RPR=406;RUN=1;SAF=406;SAP=884.628;SAR=0;SRF=186;SRP=406.904;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:102:42,60:42:1692:60:2329:-112.154,0,-121.797 0/1:117:27,90:27:1030:90:3520:-187.548,0,-57.7602 0/1:83:30,53:30:1175:53:2071:-117.828,0,-81.0392 0/1:120:51,69:51:1983:69:2666:-160.942,0,-142.535 0/1:72:16,56:16:632:56:2203:-108.224,0,-35.5353 0/1:98:20,78:20:759:78:3124:-162.555,0,-39.1169 dDocent_Contig_7350 113 . G A 84.3934 . AB=0.141026;ABP=90.3146;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=409;DPB=409;DPRA=0.850174;EPP=29.068;EPPR=862.913;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9899;NS=6;NUMALT=1;ODDS=0;PAIRED=0.916667;PAIREDR=0.959596;PAO=0;PQA=0;PQR=0;PRO=0;QA=403;QR=13458;RO=396;RPL=0;RPP=29.068;RPPR=862.913;RPR=12;RUN=1;SAF=0;SAP=29.068;SAR=12;SRF=0;SRP=862.913;SRR=396;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:43,1:43:1461:1:35:0,-9.74669,-128.285 0/0:83:83,0:83:2823:0:0:0,-24.9855,-254.318 0/0:50:49,0:49:1687:0:0:0,-14.7505,-151.768 0/0:86:86,0:86:2946:0:0:0,-25.8886,-265.387 0/1:78:67,11:67:2235:11:368:-9.96222,0,-177.932 0/0:68:68,0:68:2306:0:0:0,-20.47,-207.804 dDocent_Contig_7351 117 . C A 304.113 . AB=0.222222;ABP=57.2971;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=134;DPB=134;DPRA=6.2;EPP=46.4397;EPPR=250.558;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=709;QR=3852;RO=114;RPL=0;RPP=46.4397;RPPR=250.558;RPR=20;RUN=1;SAF=0;SAP=46.4397;SAR=20;SRF=0;SRP=250.558;SRR=114;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:13,1:13:452:1:36:0,-0.616145,-37.4129 0/0:29:28,1:28:896:1:36:0,-5.13159,-77.3286 0/1:61:47,14:47:1598:14:493:-26.3398,0,-125.739 0/1:20:16,4:16:553:4:144:-7.29302,0,-44.0751 0/0:3:3,0:3:108:0:0:0,-0.90309,-10.0752 0/0:7:7,0:7:245:0:0:0,-2.10721,-22.3902 dDocent_Contig_7352 68 . A G 62.1147 . AB=0.109375;ABP=172.657;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=380;DPB=380;DPRA=1.05405;EPP=39.9253;EPPR=791.255;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.352941;PAIREDR=0.663912;PAO=0;PQA=0;PQR=0;PRO=0;QA=616;QR=13439;RO=363;RPL=14;RPP=18.4661;RPPR=34.8885;RPR=3;RUN=1;SAF=14;SAP=18.4661;SAR=3;SRF=218;SRP=34.8885;SRR=145;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:67:64,3:64:2388:3:91:0,-11.6803,-206.627 0/1:94:84,10:84:3028:10:375:-5.80368,0,-244.405 0/1:34:30,4:30:1123:4:150:-3.62793,0,-91.1247 0/0:51:51,0:51:1896:0:0:0,-15.3525,-170.876 0/0:48:48,0:48:1808:0:0:0,-14.4494,-162.964 0/0:86:86,0:86:3196:0:0:0,-25.8886,-287.773 dDocent_Contig_7353 25 . T C 86.4842 . AB=0.157895;ABP=41.6397;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=150;DPB=150;DPRA=1.69643;EPP=16.0391;EPPR=315.702;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=236;QR=5692;RO=144;RPL=0;RPP=16.0391;RPPR=315.702;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=144;SRP=315.702;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:899:0:0:0,-6.92369,-81.2119 0/1:38:32,6:32:1265:6:236:-10.1711,0,-102.682 0/0:2:2,0:2:81:0:0:0,-0.60206,-7.68573 0/0:7:7,0:7:272:0:0:0,-2.10721,-24.8454 0/0:40:40,0:40:1594:0:0:0,-12.0412,-143.694 0/0:40:40,0:40:1581:0:0:0,-12.0412,-142.537 dDocent_Contig_7354 15 . A G 479.824 . AB=0.16763;ABP=169.009;AC=2;AF=0.166667;AN=12;AO=29;CIGAR=1X;DP=369;DPB=369;DPRA=1.76531;EPP=65.983;EPPR=741.311;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1140;QR=13343;RO=340;RPL=0;RPP=65.983;RPPR=741.311;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=340;SRP=741.311;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:359:0:0:0,-2.70927,-32.6739 0/0:73:73,0:73:2840:0:0:0,-21.9752,-255.729 0/0:54:54,0:54:2106:0:0:0,-16.2556,-189.734 0/0:60:60,0:60:2365:0:0:0,-18.0618,-213.027 0/1:103:82,21:82:3226:21:827:-43.7427,0,-259.424 0/1:70:62,8:62:2447:8:313:-7.46153,0,-199.319 dDocent_Contig_7355 69 . A T 548.468 . AB=0.178161;ABP=159.556;AC=4;AF=0.333333;AN=12;AO=32;CIGAR=3M1X3M;DP=229;DPB=229.286;DPRA=1.98095;EPP=72.4974;EPPR=426.447;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.625;PAIREDR=0.507692;PAO=0;PQA=0;PQR=0;PRO=0;QA=1294;QR=7611;RO=195;RPL=32;RPP=72.4974;RPPR=426.447;RPR=0;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=195;SRP=426.447;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:21:21,0,0:21:828:0,0:0,0:0,-6.32163,-74.8409,-6.32163,-74.8409,-74.8409 0|1:39:33,0,6:33:1274:0,6:0,245:-10.6893,-20.6233,-125.225,0,-105.006,-103.2 0|1:40:32,0,8:32:1246:0,8:0,328:-17.8491,-27.4821,-129.871,0,-102.794,-100.386 0|1:35:28,2,5:28:1087:2,5:81,204:-8.40468,-10.1552,-98.8476,0,-82.6152,-87.7904 0|0:34:33,0,1:33:1295:0,1:0,41:0,-9.93399,-116.421,-6.14045,-113.036,-112.735 0|1:60:48,0,12:48:1881:0,12:0,476:-25.1256,-39.575,-194.249,0,-155.07,-151.457 dDocent_Contig_7356 41 . C T 281.435 . AB=0.112676;ABP=373.078;AC=2;AF=0.166667;AN=12;AO=42;CIGAR=1X;DP=726;DPB=726;DPRA=0;EPP=94.2121;EPPR=1475.27;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.761905;PAIREDR=0.884956;PAO=0;PQA=0;PQR=0;PRO=0;QA=1684;QR=26961;RO=678;RPL=0;RPP=94.2121;RPPR=1475.27;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=678;SRP=1475.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:140:136,4:136:5370:4:163:0,-27.0858,-468.09 0/1:173:154,19:154:6070:19:766:-17.1835,0,-494.002 0/1:111:98,13:98:3913:13:525:-14.1818,0,-318.739 0/0:103:100,3:100:3979:3:108:0,-20.9336,-348.015 0/0:77:74,2:74:2982:2:81:0,-15.5938,-260.78 0/0:122:116,1:116:4647:1:41:0,-31.5344,-414.05 dDocent_Contig_7357 77 . T A 295.503 . AB=0.20202;ABP=79.3628;AC=3;AF=0.25;AN=12;AO=21;CIGAR=1X;DP=201;DPB=201;DPRA=0.668605;EPP=48.6112;EPPR=393.875;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.916667;PAO=0;PQA=0;PQR=0;PRO=0;QA=741;QR=6317;RO=180;RPL=21;RPP=48.6112;RPPR=393.875;RPR=0;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=180;SRP=393.875;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:31,0:31:1081:0:0:0,-9.33193,-97.5977 0/1:55:48,7:48:1694:7:243:-5.65224,0,-136.188 0/0:55:55,0:55:1936:0:0:0,-16.5566,-174.517 0/1:27:18,9:18:635:9:319:-20.9238,0,-49.3502 0/1:17:13,4:13:449:4:144:-8.19611,0,-35.6216 0/0:16:15,1:15:522:1:35:0,-1.31785,-43.8104 dDocent_Contig_7358 38 . C G 261.593 . AB=0.363636;ABP=4.78696;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=6M1X2M;DP=218;DPB=210.222;DPRA=0.702703;EPP=13.8677;EPPR=430.834;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.8;PAIREDR=0.711443;PAO=0;PQA=0;PQR=0;PRO=0;QA=203;QR=7778;RO=201;RPL=0;RPP=13.8677;RPPR=422.277;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=200;SRP=430.834;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:18:18,0,0:18:670:0,0:0,0:0,-5.41854,-60.6237,-5.41854,-60.6237,-60.6237 0|0:41:40,0,1:40:1550:0,1:0,41:0,-12.0412,-139.354,-8.24766,-135.969,-135.668 0|1:11:7,0,4:7:266:0,4:0,162:-11.6556,-13.7628,-35.56,0,-22.1927,-20.9886 0|0:58:56,0,0:56:2159:0,0:0,0:0,-16.8577,-194.239,-16.8577,-194.239,-194.239 0|0:35:35,0,0:35:1364:0,0:0,0:0,-10.536,-123.036,-10.536,-123.036,-123.036 0|0:55:45,10,0:45:1769:10,0:377,0:-17.7255,0,-142.892,-31.2718,-145.902,-176.794 dDocent_Contig_7359 10 . C T 3751.53 . AB=0.356265;ABP=76.0454;AC=5;AF=0.416667;AN=12;AO=148;CIGAR=1X;DP=530;DPB=530;DPRA=0;EPP=324.388;EPPR=830.341;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5735;QR=15341;RO=381;RPL=0;RPP=324.388;RPPR=830.341;RPR=148;RUN=1;SAF=148;SAP=324.388;SAR=0;SRF=381;SRP=830.341;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:22,31:22:878:31:1192:-91.4942,0,-63.2479 0/1:89:70,19:70:2826:19:713:-37.6954,0,-227.646 0/1:67:29,38:29:1167:38:1475:-112.843,0,-85.1382 0/1:39:15,24:15:598:24:943:-73.4392,0,-42.4191 0/0:123:120,3:120:4855:3:121:0,-25.7465,-425.539 0/1:158:125,33:125:5017:33:1291:-68.9028,0,-403.836 dDocent_Contig_7360 10 . C T 214.319 . AB=0.127072;ABP=221.657;AC=1;AF=0.0833333;AN=12;AO=26;CIGAR=1X;DP=662;DPB=662;DPRA=1.47015;EPP=59.4686;EPPR=1379.72;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=963;QR=25392;RO=634;RPL=0;RPP=59.4686;RPPR=1379.72;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=634;SRP=1379.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:84:82,2:82:3300:2:79:0,-17.7889,-289.543 0/0:92:92,0:92:3648:0:0:0,-27.6948,-328.345 0/0:55:55,0:55:2235:0:0:0,-16.5566,-201.306 0/1:181:158,23:158:6335:23:857:-22.9548,0,-515.392 0/0:121:121,0:121:4846:0:0:0,-36.4246,-436.038 0/0:129:126,1:126:5028:1:27:0,-35.8425,-449.606 dDocent_Contig_7361 140 . A G 1874.1 . AB=0.538462;ABP=4.51363;AC=1;AF=0.1;AN=10;AO=63;CIGAR=1X;DP=301;DPB=301;DPRA=2.54348;EPP=139.813;EPPR=519.821;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2490;QR=9472;RO=238;RPL=0;RPP=139.813;RPPR=519.821;RPR=63;RUN=1;SAF=0;SAP=139.813;SAR=63;SRF=0;SRP=519.821;SRR=238;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 0/0:90:90,0:90:3593:0:0:0,-27.0927,-323.39 0/0:14:14,0:14:562:0:0:0,-4.21442,-50.9206 0/0:51:51,0:51:2027:0:0:0,-15.3525,-182.613 0/0:29:29,0:29:1173:0:0:0,-8.72987,-105.846 0/1:117:54,63:54:2117:63:2490:-189.012,0,-155.484 dDocent_Contig_7362 14 . G A 1190.57 . AB=0.122705;ABP=1282.73;AC=6;AF=0.5;AN=12;AO=127;CIGAR=1X3M;DP=1035;DPB=1035;DPRA=0;EPP=278.787;EPPR=1907.39;GTI=0;LEN=1;MEANALT=2.33333;MQM=49.937;MQMR=58.6477;NS=6;NUMALT=2;ODDS=0;PAIRED=0.15748;PAIREDR=0.237172;PAO=0;PQA=0;PQR=0;PRO=0;QA=4933;QR=34612;RO=877;RPL=0;RPP=278.787;RPPR=1907.39;RPR=127;RUN=1;SAF=127;SAP=278.787;SAR=0;SRF=877;SRP=1907.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:124:108,4,12:108:4284:4,12:152,471:-4.82404,-31.3893,-377.294,0,-341.297,-343.669 0|1:217:186,3,28:186:7395:3,28:119,1050:-26.9789,-78.1105,-683.471,0,-601.542,-597.984 0|1:118:101,6,11:101:3992:6,11:241,411:-2.39585,-16.6889,-339.132,0,-308.162,-320.97 0|1:188:153,8,27:153:6000:8,27:309,1072:-40.6039,-65.2087,-539.297,0,-455.087,-468.423 0|1:204:174,6,22:174:6823:6,22:236,892:-19.9796,-57.2536,-616.464,0,-545.98,-554.475 0|1:184:155,2,27:155:6118:2,27:81,1037:-35.4681,-78.1157,-580.007,0,-498.591,-494.482 dDocent_Contig_7363 1 . N G 114.653 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:123:-11.4648,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_7364 19 . A T 66.5964 . AB=0.162162;ABP=39.6906;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=206;DPB=206;DPRA=1.09467;EPP=16.0391;EPPR=428.662;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.77;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.655;PAO=0;PQA=0;PQR=0;PRO=0;QA=211;QR=7855;RO=200;RPL=0;RPP=16.0391;RPPR=437.305;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=199;SRP=428.662;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:994:0:0:0,-7.52575,-89.756 0/0:27:27,0:27:1042:0:0:0,-8.12781,-94.0612 0/0:39:39,0:39:1517:0:0:0,-11.7402,-136.411 0/1:37:31,6:31:1227:6:211:-8.18252,0,-99.5653 0/0:42:42,0:42:1666:0:0:0,-12.6433,-150.173 0/0:36:36,0:36:1409:0:0:0,-10.8371,-127.063 dDocent_Contig_7365 1 . N G 141.412 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=7.37776;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=153;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:153:-14.1409,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_7366 11 . C T 8598.66 . AB=0.609442;ABP=51.491;AC=6;AF=0.5;AN=12;AO=284;CIGAR=2M1X2M;DP=466;DPB=465.4;DPRA=0;EPP=619.708;EPPR=378.675;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11214;QR=6767;RO=173;RPL=0;RPP=619.708;RPPR=378.675;RPR=284;RUN=1;SAF=284;SAP=619.708;SAR=0;SRF=173;SRP=378.675;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:41:10,0,31:10:390:0,31:0,1217:-97.4708,-100.481,-132.537,0,-32.4458,-23.1138 0|1:84:30,0,52:30:1186:0,52:0,2052:-159.768,-168.799,-266.401,0,-97.589,-81.9354 0|1:51:6,1,44:6:230:1,44:32,1745:-141.903,-141.133,-159.707,0,-16.3617,-5.68574 0|1:54:17,3,34:17:654:3,34:114,1339:-105.047,-100.817,-153.595,0,-44.3401,-43.4538 0|1:118:62,0,54:62:2424:0,54:0,2150:-158.37,-177.034,-376.321,0,-199.286,-183.031 0|1:118:48,0,69:48:1883:0,69:0,2711:-208.528,-222.978,-377.833,0,-154.877,-134.106 dDocent_Contig_7367 56 . T A 483.85 . AB=0.19403;ABP=111.973;AC=2;AF=0.166667;AN=12;AO=26;CIGAR=1X;DP=301;DPB=301;DPRA=1.60479;EPP=59.4686;EPPR=600.165;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.370909;PAO=0;PQA=0;PQR=0;PRO=0;QA=1014;QR=10845;RO=275;RPL=26;RPP=59.4686;RPPR=600.165;RPR=0;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=275;SRP=600.165;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:880:0:0:0,-6.62266,-79.5107 0/0:55:55,0:55:2137:0:0:0,-16.5566,-192.524 0/0:43:43,0:43:1698:0:0:0,-12.9443,-153.048 0/0:47:47,0:47:1833:0:0:0,-14.1484,-165.201 0/1:62:51,11:51:2018:11:422:-19.6629,0,-163.154 0/1:72:57,15:57:2279:15:592:-31.944,0,-183.599 dDocent_Contig_7368 31 . G T 12650.7 . AB=0.084507;ABP=109.474;AC=0;AF=0;AN=12;AO=6;CIGAR=2X;DP=596;DPB=596;DPRA=0.438272;EPP=16.0391;EPPR=417.762;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=244;QR=7297;RO=191;RPL=0;RPP=16.0391;RPPR=417.762;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=191;SRP=417.762;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:37:26,0,11:26:978:0,11:0,433:-28.185,-36.0118,-116.124,0,-80.5004,-77.1891 0|0:140:80,0,59:80:3044:0,59:0,2316:-166.69,-190.772,-440.411,0,-249.94,-232.179 0|0:71:21,6,44:21:809:6,44:244,1738:-136.673,-122.867,-187.484,0,-46.2784,-53.1643 0|0:88:20,0,68:20:775:0,68:0,2676:-214.482,-220.503,-284.17,0,-64.0561,-43.586 0|0:162:0,0,162:0:0:0,162:0,6351:-571.358,-571.358,-571.358,-48.7669,-48.7669,0 0|0:98:44,0,54:44:1691:0,54:0,2069:-156.906,-170.151,-308.968,0,-139.2,-122.945 dDocent_Contig_7369 1 . N G 1193.6 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=38;CIGAR=1X;DP=38;DPB=38;DPRA=0;EPP=85.5263;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1300;QR=0;RO=0;RPL=0;RPP=85.5263;RPPR=0;RPR=38;RUN=1;SAF=0;SAP=85.5263;SAR=38;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:10:0,10:0:0:10:347:-31.5651,-3.0103,0 1/1:5:0,5:0:0:5:172:-15.8185,-1.50515,0 1/1:3:0,3:0:0:3:102:-9.5168,-0.90309,0 1/1:13:0,13:0:0:13:450:-40.8311,-3.91339,0 1/1:7:0,7:0:0:7:229:-20.9298,-2.10721,0 dDocent_Contig_7370 7 . T C 2157.38 . AB=0.465116;ABP=4.82828;AC=6;AF=0.5;AN=12;AO=80;CIGAR=1X;DP=172;DPB=172;DPRA=0;EPP=176.728;EPPR=202.786;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.7375;PAIREDR=0.706522;PAO=0;PQA=0;PQR=0;PRO=0;QA=3074;QR=3542;RO=92;RPL=0;RPP=176.728;RPPR=202.786;RPR=80;RUN=1;SAF=80;SAP=176.728;SAR=0;SRF=92;SRP=202.786;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:9,10:9:343:10:388:-29.5584,0,-25.5081 0/1:27:14,13:14:538:13:505:-37.6714,0,-40.6371 0/1:21:10,11:10:396:11:415:-31.3755,0,-29.6772 0/1:35:20,15:20:776:15:583:-42.2772,0,-59.6322 0/1:26:18,8:18:676:8:311:-20.5275,0,-53.344 0/1:44:21,23:21:813:23:872:-65.5494,0,-60.2502 dDocent_Contig_7371 19 . C A 36.6301 . AB=0.108108;ABP=101.724;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=233;DPB=233;DPRA=1.07432;EPP=24.725;EPPR=487.249;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.986547;PAO=0;PQA=0;PQR=0;PRO=0;QA=394;QR=8959;RO=223;RPL=0;RPP=24.725;RPPR=487.249;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=223;SRP=487.249;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:1037:0:0:0,-7.82678,-93.6215 0/0:41:40,1:40:1617:1:36:0,-8.74395,-142.16 0/0:48:48,0:48:1933:0:0:0,-14.4494,-174.162 0/0:44:43,1:43:1731:1:41:0,-9.15075,-151.906 0/1:30:27,3:27:1090:3:117:-1.8788,0,-89.3505 0/1:44:39,5:39:1551:5:200:-5.13422,0,-126.581 dDocent_Contig_7372 36 . A C 1154.76 . AB=0.415842;ABP=9.22372;AC=2;AF=0.166667;AN=12;AO=44;CIGAR=1X;DP=293;DPB=293;DPRA=1.44167;EPP=98.5551;EPPR=543.707;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1729;QR=9895;RO=249;RPL=0;RPP=98.5551;RPPR=543.707;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=249;SRP=543.707;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:887:0:0:0,-6.62266,-80.1376 0/1:70:40,30:40:1610:30:1202:-87.3814,0,-124.055 0/0:72:70,2:70:2772:2:79:0,-14.1769,-242.091 0/1:31:19,12:19:745:12:448:-31.3161,0,-58.0352 0/0:48:48,0:48:1907:0:0:0,-14.4494,-171.838 0/0:50:50,0:50:1974:0:0:0,-15.0515,-177.855 dDocent_Contig_7373 19 . G A 4983.65 . AB=0.283498;ABP=291.669;AC=4;AF=0.333333;AN=12;AO=201;CIGAR=1X;DP=838;DPB=838;DPRA=2.74806;EPP=439.476;EPPR=1384.07;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.968553;PAO=0;PQA=0;PQR=0;PRO=0;QA=7980;QR=25178;RO=636;RPL=0;RPP=439.476;RPPR=1384.07;RPR=201;RUN=1;SAF=201;SAP=439.476;SAR=0;SRF=636;SRP=1384.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:177:120,57:120:4736:57:2236:-148.133,0,-372.88 0/1:191:135,56:135:5389:56:2242:-144.443,0,-427.353 0/1:192:129,62:129:5125:62:2493:-166.757,0,-403.372 0/1:149:123,26:123:4830:26:1009:-46.2542,0,-389.769 0/0:86:86,0:86:3410:0:0:0,-25.8886,-306.955 0/0:43:43,0:43:1688:0:0:0,-12.9443,-152.141 dDocent_Contig_7374 9 . G A 67.9847 . AB=0.14;ABP=59.2949;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=185;DPB=185;DPRA=0.778846;EPP=20.3821;EPPR=387.361;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.875;PAIREDR=0.785311;PAO=0;PQA=0;PQR=0;PRO=0;QA=308;QR=6789;RO=177;RPL=0;RPP=20.3821;RPPR=387.361;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=177;SRP=387.361;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:873:0:0:0,-6.92369,-78.8883 0/0:31:30,1:30:1149:1:38:0,-5.53466,-99.9124 0/1:16:14,2:14:532:2:78:-2.58699,0,-43.4065 0/1:34:29,5:29:1099:5:192:-7.41499,0,-88.9776 0/0:49:49,0:49:1903:0:0:0,-14.7505,-171.511 0/0:32:32,0:32:1233:0:0:0,-9.63296,-111.262 dDocent_Contig_7375 43 . C G 1727.68 . AB=0.0588235;ABP=376.631;AC=0;AF=0;AN=12;AO=13;CIGAR=1X2M1X;DP=343;DPB=343;DPRA=1.02315;EPP=31.2394;EPPR=545.878;GTI=0;LEN=1;MEANALT=2.25;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.384615;PAIREDR=0.696;PAO=0;PQA=0;PQR=0;PRO=0;QA=514;QR=9844;RO=250;RPL=0;RPP=31.2394;RPPR=545.878;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=250;SRP=545.878;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:43:29,4,10:29:1133:4,10:156,389:-23.2327,-19.141,-111.079,0,-80.3199,-90.1308 0|0:57:37,2,18:37:1443:2,18:75,714:-47.6538,-52.6505,-170.65,0,-112.478,-113.202 0|0:32:24,1,7:24:950:1,7:41,284:-16.1929,-20.033,-97.9096,0,-74.787,-76.0645 0|0:89:48,6,34:48:1887:6,34:242,1308:-92.8985,-87.397,-240.801,0,-135.246,-144.961 0|0:54:51,0,3:51:2007:0,3:0,112:0,-15.3525,-180.466,-5.81099,-171.298,-170.395 0|0:68:61,0,6:61:2424:0,6:0,237:-1.21921,-19.582,-219.161,0,-199.66,-197.854 dDocent_Contig_7376 43 . T C 911.769 . AB=0.182131;ABP=258.401;AC=6;AF=0.5;AN=12;AO=53;CIGAR=1X;DP=291;DPB=291;DPRA=0;EPP=28.6173;EPPR=33.7029;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.433962;PAIREDR=0.44958;PAO=0;PQA=0;PQR=0;PRO=0;QA=2077;QR=9074;RO=238;RPL=9;RPP=53.2;RPPR=413.072;RPR=44;RUN=1;SAF=38;SAP=24.6841;SAR=15;SRF=155;SRP=50.3083;SRR=83;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:29,3:29:1115:3:115:-1.08942,0,-91.0057 0/1:53:41,12:41:1538:12:468:-26.5091,0,-122.73 0/1:50:44,6:44:1644:6:240:-6.92234,0,-133.167 0/1:60:46,14:46:1768:14:546:-31.4174,0,-141.289 0/1:48:41,7:41:1601:7:277:-10.8491,0,-129.879 0/1:48:37,11:37:1408:11:431:-24.692,0,-112.538 dDocent_Contig_7377 36 . G A 573.824 . AB=0.165079;ABP=309.919;AC=4;AF=0.333333;AN=12;AO=59;CIGAR=1X;DP=462;DPB=462;DPRA=0;EPP=131.127;EPPR=878.114;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.915254;PAIREDR=0.935484;PAO=0;PQA=0;PQR=0;PRO=0;QA=2002;QR=13755;RO=403;RPL=0;RPP=131.127;RPPR=878.114;RPR=59;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=403;SRP=878.114;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:67:56,11:56:1908:11:377:-14.0919,0,-151.827 0/0:83:80,3:80:2715:3:105:0,-15.1893,-234.804 0/0:64:60,4:60:2049:4:140:0,-6.32099,-171.742 0/1:96:81,15:81:2811:15:484:-14.97,0,-224.343 0/1:62:52,10:52:1788:10:342:-12.4474,0,-142.54 0/1:90:74,16:74:2484:16:554:-23.0949,0,-196.725 dDocent_Contig_7378 12 . C T 75.614 . AB=0.134615;ABP=63.3104;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=1X;DP=260;DPB=260;DPRA=0.5;EPP=18.2106;EPPR=543.741;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.972332;PAO=0;PQA=0;PQR=0;PRO=0;QA=279;QR=10112;RO=253;RPL=0;RPP=18.2106;RPPR=552.393;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=252;SRP=543.741;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:876:0:0:0,-6.62266,-79.1482 0/1:30:25,5:25:980:5:197:-9.07401,0,-79.4636 0/1:22:20,2:20:817:2:82:-1.15702,0,-67.2205 0/0:70:70,0:70:2808:0:0:0,-21.0721,-252.823 0/0:51:51,0:51:2045:0:0:0,-15.3525,-184.231 0/0:65:65,0:65:2586:0:0:0,-19.5669,-232.872 dDocent_Contig_7379 8 . T A 36.8614 . AB=0.09375;ABP=48.8827;AC=0;AF=0;AN=12;AO=4;CIGAR=1X2M7D1M;DP=129;DPB=126.455;DPRA=1.35065;EPP=11.6962;EPPR=257.073;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.700855;PAO=0;PQA=0;PQR=0;PRO=0;QA=155;QR=4507;RO=117;RPL=0;RPP=11.6962;RPPR=257.073;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=117;SRP=257.073;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:14:13,0,0:13:508:0,0:0,0:0,-3.91339,-45.6693,-3.91339,-45.6693,-45.6693 0|0:21:21,0,0:21:805:0,0:0,0:0,-6.32163,-72.7693,-6.32163,-72.7693,-72.7693 0|0:17:17,0,0:17:650:0,0:0,0:0,-5.11751,-58.8304,-5.11751,-58.8304,-58.8304 0|0:25:24,0,0:24:917:0,0:0,0:0,-7.22472,-82.7305,-7.22472,-82.7305,-82.7305 0|0:20:17,1,1:17:654:1,1:39,39:0,-1.91328,-55.2939,-1.91328,-52.3889,-55.2939 0|0:32:25,3,4:25:973:3,4:116,155:-5.20887,-3.20671,-82.2699,0,-70.4391,-78.763 dDocent_Contig_7380 12 . C T 89.17 . AB=0.114943;ABP=115.053;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=448;DPB=448;DPRA=0.993333;EPP=37.7539;EPPR=941.086;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.4375;PAIREDR=0.722222;PAO=0;PQA=0;PQR=0;PRO=0;QA=645;QR=17292;RO=432;RPL=0;RPP=37.7539;RPPR=941.086;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=432;SRP=941.086;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:58:58,0:58:2293:0:0:0,-17.4597,-206.538 0/0:92:92,0:92:3683:0:0:0,-27.6948,-331.486 0/0:79:76,3:76:3061:3:123:0,-12.3166,-264.092 0/0:51:50,1:50:2009:1:38:0,-11.5553,-177.2 0/1:87:77,10:77:3087:10:403:-10.4399,0,-251.709 0/0:81:79,2:79:3159:2:81:0,-16.6977,-276.695 dDocent_Contig_7381 26 . G A 385.425 . AB=0.242857;ABP=43.2136;AC=2;AF=0.166667;AN=12;AO=18;CIGAR=1X;DP=587;DPB=587;DPRA=0.358796;EPP=42.0968;EPPR=1236.41;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.992958;PAO=0;PQA=0;PQR=0;PRO=0;QA=731;QR=22670;RO=568;RPL=0;RPP=42.0968;RPPR=1236.41;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=568;SRP=1236.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:85:84,1:84:3366:1:41:0,-21.493,-298.885 0/0:179:178,0:178:7082:0:0:0,-53.5833,-636.639 0/0:112:112,0:112:4465:0:0:0,-33.7154,-401.787 0/0:141:141,0:141:5623:0:0:0,-42.4452,-505.89 0/1:33:29,4:29:1173:4:164:-5.21591,0,-95.912 0/1:37:24,13:24:961:13:526:-36.5484,0,-75.6541 dDocent_Contig_7382 56 . A G 217.606 . AB=0.168675;ABP=82.1513;AC=2;AF=0.2;AN=10;AO=18;CIGAR=1X;DP=261;DPB=261;DPRA=0.517647;EPP=42.0968;EPPR=530.678;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0.222222;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=712;QR=9446;RO=243;RPL=13;RPP=10.7311;RPPR=530.678;RPR=5;RUN=1;SAF=13;SAP=10.7311;SAR=5;SRF=243;SRP=530.678;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:40:31,9:31:1187:9:357:-20.4501,0,-95.0651 0/0:40:37,3:37:1417:3:123:0,-0.576411,-116.309 0/1:43:38,5:38:1502:5:191:-4.6111,0,-122.478 0/0:85:85,0:85:3306:0:0:0,-25.5875,-297.617 ./.:.:.:.:.:.:.:. 0/0:53:52,1:52:2034:1:41:0,-11.86,-179.163 dDocent_Contig_7383 35 . G T 168.718 . AB=0.186441;ABP=53.3958;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=334;DPB=334;DPRA=0.87931;EPP=7.18621;EPPR=47.3936;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.615385;PAIREDR=0.429907;PAO=0;PQA=0;PQR=0;PRO=0;QA=479;QR=12106;RO=321;RPL=0;RPP=31.2394;RPPR=700.053;RPR=13;RUN=1;SAF=9;SAP=7.18621;SAR=4;SRF=201;SRP=47.3936;SRR=120;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:43:41,2:41:1527:2:81:0,-5.25856,-130.01 0/0:58:58,0:58:2196:0:0:0,-17.4597,-197.843 0/0:33:33,0:33:1209:0:0:0,-9.93399,-109.093 0/0:58:58,0:58:2195:0:0:0,-17.4597,-197.756 0/1:59:48,11:48:1791:11:398:-18.3947,0,-143.668 0/0:83:83,0:83:3188:0:0:0,-24.9855,-287.033 dDocent_Contig_7385 50 . T A 52.2421 . AB=0.148148;ABP=32.0437;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=325;DPB=325;DPRA=0.620968;EPP=13.8677;EPPR=697.881;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99375;PAO=0;PQA=0;PQR=0;PRO=0;QA=201;QR=12811;RO=320;RPL=5;RPP=13.8677;RPPR=697.881;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=320;SRP=697.881;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1392:0:0:0,-10.536,-125.535 0/0:55:55,0:55:2196:0:0:0,-16.5566,-197.805 0/1:27:23,4:23:924:4:161:-6.74709,0,-75.3372 0/0:50:49,1:49:1961:1:40:0,-11.0558,-172.688 0/0:80:80,0:80:3187:0:0:0,-24.0824,-286.893 0/0:78:78,0:78:3151:0:0:0,-23.4803,-283.652 dDocent_Contig_7386 24 . G T 9733.58 . AB=0.315789;ABP=266.216;AC=7;AF=0.583334;AN=12;AO=282;CIGAR=1X5M;DP=893;DPB=893;DPRA=0;EPP=615.366;EPPR=632.737;GTI=0;LEN=1;MEANALT=4.66667;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=1;PAIREDR=0.986207;PAO=0;PQA=0;PQR=0;PRO=0;QA=11080;QR=11269;RO=290;RPL=0;RPP=615.366;RPPR=632.737;RPR=282;RUN=1;SAF=282;SAP=615.366;SAR=0;SRF=290;SRP=632.737;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:95:35,6,17,0,23,11:35:1354:6,17,0,23,11:230,664,0,896,396:-63.1027,-54.7619,-164.17,-19.0515,-111.39,-125.149,-73.6388,-165.976,-130.267,-184.853,0,-92.339,-56.6291,-111.216,-104.292,-41.3448,-133.68,-97.9714,-152.557,-78.9208,-149.245 0|1:167:70,17,32,0,43,5:70:2740:17,32,0,43,5:661,1250,0,1683,197:-117.292,-84.0443,-304.217,-36.1612,-207.131,-251.818,-138.364,-309.335,-261.451,-363.655,0,-170.971,-123.088,-225.291,-212.347,-122.158,-293.128,-245.245,-347.448,-209.085,-345.943 0|1:119:38,8,30,8,33,1:38:1488:8,30,8,33,1:315,1179,295,1322,41:-97.4792,-83.0057,-202.942,-11.951,-108.383,-125.265,-84.7952,-181.226,-110.172,-204.73,0,-96.4341,-25.378,-98.2234,-112.413,-105.534,-201.966,-130.911,-203.754,-118.963,-227.577 0|1:240:81,1,58,0,94,6:81:3139:1,58,0,94,6:40,2273,0,3675,221:-277.721,-298.809,-556.373,-115.751,-370.321,-356.156,-302.104,-556.674,-373.616,-559.969,0,-254.569,-71.5104,-257.865,-229.568,-284.039,-538.608,-355.551,-541.904,-239.8,-540.097 0|1:164:47,0,70,0,36,6:47:1810:0,70,0,36,6:0,2751,0,1414,239:-212.108,-226.256,-374.855,0,-148.597,-127.525,-226.256,-374.855,-148.597,-374.855,-109.967,-258.565,-32.305,-258.565,-247.727,-206.575,-355.174,-128.915,-355.174,-238.883,-353.368 1|1:108:19,0,35,0,53,0:19:738:0,35,0,53,0:0,1355,0,2090,0:-216.878,-222.597,-283.236,-111.311,-171.949,-161.413,-222.597,-283.236,-171.949,-283.236,-50.6479,-111.287,0,-111.287,-95.3328,-222.597,-283.236,-171.949,-283.236,-111.287,-283.236 dDocent_Contig_7387 96 . T A 725.892 . AB=0.146392;ABP=529.756;AC=3;AF=0.25;AN=12;AO=71;CIGAR=1X;DP=656;DPB=656;DPRA=2.83626;EPP=157.185;EPPR=1273.32;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.998291;PAO=0;PQA=0;PQR=0;PRO=0;QA=2457;QR=20237;RO=585;RPL=71;RPP=157.185;RPPR=1273.32;RPR=0;RUN=1;SAF=71;SAP=157.185;SAR=0;SRF=585;SRP=1273.32;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:93:93,0:93:3192:0:0:0,-27.9958,-287.521 0/1:138:124,14:124:4198:14:461:-0.261237,0,-336.482 0/1:209:170,39:170:5953:39:1360:-59.7833,0,-472.972 0/1:138:120,18:120:4205:18:636:-16.0265,0,-337.099 0/0:46:46,0:46:1561:0:0:0,-13.8474,-140.778 0/0:32:32,0:32:1128:0:0:0,-9.63296,-101.828 dDocent_Contig_7388 125 . G T 124.778 . AB=0.214286;ABP=22.8638;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=97;DPB=97;DPRA=2.02899;EPP=16.0391;EPPR=200.614;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.89011;PAO=0;PQA=0;PQR=0;PRO=0;QA=245;QR=3658;RO=91;RPL=6;RPP=16.0391;RPPR=200.614;RPR=0;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=200.614;SRR=91;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:480:0:0:0,-3.61236,-43.55 0/0:18:18,0:18:709:0:0:0,-5.41854,-64.1324 0/0:3:3,0:3:123:0:0:0,-0.90309,-11.4648 0/0:21:21,0:21:844:0:0:0,-6.32163,-76.2696 0/1:28:22,6:22:891:6:245:-14.0006,0,-72.0687 0/0:15:15,0:15:611:0:0:0,-4.51545,-55.3275 dDocent_Contig_7389 11 . A T 66.889 . AB=0.190476;ABP=20.4855;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=187;DPB=187;DPRA=0.63253;EPP=11.6962;EPPR=400.39;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.89071;PAO=0;PQA=0;PQR=0;PRO=0;QA=154;QR=7332;RO=183;RPL=0;RPP=11.6962;RPPR=400.39;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=183;SRP=400.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:17,4:17:687:4:154:-7.91074,0,-55.8381 0/0:39:39,0:39:1552:0:0:0,-11.7402,-139.92 0/0:13:13,0:13:530:0:0:0,-3.91339,-48.0466 0/0:21:21,0:21:830:0:0:0,-6.32163,-75.0124 0/0:33:33,0:33:1327:0:0:0,-9.93399,-119.688 0/0:60:60,0:60:2406:0:0:0,-18.0618,-216.686 dDocent_Contig_7390 27 . G A 11851.8 . AB=0.0588235;ABP=146.711;AC=0;AF=0;AN=12;AO=5;CIGAR=1X1M2X;DP=558;DPB=558;DPRA=0;EPP=13.8677;EPPR=300.502;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.963504;PAO=0;PQA=0;PQR=0;PRO=0;QA=200;QR=5282;RO=137;RPL=0;RPP=13.8677;RPPR=300.502;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=137;SRP=300.502;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:70:15,2,0,52:15:582:2,0,52:81,0,1963:-156.32,-154.155,-201.375,-160.835,-201.977,-208.657,0,-41.1284,-47.8094,-32.1558 0|0:144:35,5,0,104:35:1333:5,0,104:186,0,4059:-323.132,-318.448,-426.279,-333.668,-427.784,-443.004,0,-94.1266,-109.346,-78.0392 0|0:84:19,1,0,63:19:740:1,0,63:40,0,2479:-198.218,-200.643,-261.158,-203.938,-261.459,-264.754,0,-57.5347,-60.8303,-41.8654 0|0:113:23,4,0,86:23:896:4,0,86:160,0,3327:-266.322,-260.066,-332.505,-273.246,-333.709,-346.89,0,-60.453,-73.6342,-47.7457 0|0:62:13,5,0,42:13:499:5,0,42:198,0,1570:-124.657,-112.271,-151.726,-128.571,-153.231,-169.53,0,-24.685,-40.9923,-28.349 0|0:85:32,5,5,43:32:1232:5,5,43:199,200,1672:-127.756,-121.003,-220.649,-120.913,-205.679,-220.559,0,-84.7566,-84.6665,-88.199 dDocent_Contig_7391 9 . G A 5004.06 . AB=0.270833;ABP=375.237;AC=6;AF=0.5;AN=12;AO=221;CIGAR=1X4M;DP=816;DPB=816;DPRA=0;EPP=482.906;EPPR=1271.15;GTI=0;LEN=1;MEANALT=2;MQM=57.5249;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.886878;PAIREDR=0.976027;PAO=0;PQA=0;PQR=0;PRO=0;QA=8430;QR=22970;RO=584;RPL=0;RPP=482.906;RPPR=1271.15;RPR=221;RUN=1;SAF=221;SAP=482.906;SAR=0;SRF=584;SRP=1271.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:109:70,1,38:70:2766:1,38:40,1456:-98.0558,-116.458,-343.782,0,-225.01,-216.241 0|1:74:37,5,30:37:1442:5,30:189,1158:-83.9977,-82.1721,-199.184,0,-105.588,-109.522 0|1:92:47,2,43:47:1847:2,43:79,1656:-121.5,-130.328,-281.65,0,-146.66,-139.036 0|1:111:62,0,48:62:2440:0,48:0,1851:-133.433,-152.096,-352.822,0,-200.822,-186.372 0|1:229:206,0,23:206:8116:0,23:0,844:-5.3117,-67.3239,-735.056,0,-668.092,-661.169 0|1:201:162,0,39:162:6359:0,39:0,1465:-69.3303,-118.097,-641.104,0,-523.38,-511.64 dDocent_Contig_7392 15 . T C 9253.85 . AB=0.409774;ABP=59.4359;AC=6;AF=0.5;AN=12;AO=327;CIGAR=1X4M;DP=798;DPB=798;DPRA=0;EPP=713.082;EPPR=999.716;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.770642;PAIREDR=0.847495;PAO=0;PQA=0;PQR=0;PRO=0;QA=13036;QR=17966;RO=459;RPL=0;RPP=713.082;RPPR=999.716;RPR=327;RUN=1;SAF=327;SAP=713.082;SAR=0;SRF=459;SRP=999.716;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:117:64,0,51:64:2490:0,51:0,2025:-147.558,-166.824,-371.446,0,-204.753,-189.4 0|1:156:95,0,61:95:3688:0,61:0,2450:-173.684,-202.282,-505.289,0,-303.403,-285.04 0|1:129:76,7,44:76:2998:7,44:263,1778:-123.721,-125.063,-369.624,0,-225.148,-233.441 0|1:145:85,0,60:85:3344:0,60:0,2402:-172.682,-198.269,-473.346,0,-275.473,-257.412 0|1:85:55,0,29:55:2150:0,29:0,1117:-75.1202,-91.6769,-268.443,0,-176.754,-168.024 0|1:166:84,0,82:84:3296:0,82:0,3264:-243.841,-269.128,-540.186,0,-271.453,-246.769 dDocent_Contig_7393 44 . C T 2336.2 . AB=0.328947;ABP=80.269;AC=5;AF=0.416667;AN=12;AO=101;CIGAR=1X;DP=354;DPB=354;DPRA=0;EPP=9.22372;EPPR=25.3344;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.623762;PAIREDR=0.632411;PAO=0;PQA=0;PQR=0;PRO=0;QA=3733;QR=9556;RO=253;RPL=0;RPP=222.329;RPPR=552.393;RPR=101;RUN=1;SAF=59;SAP=9.22372;SAR=42;SRF=152;SRP=25.3344;SRR=101;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:27,9:27:1031:9:329:-19.1207,0,-82.2511 0/1:60:29,31:29:1070:31:1144:-85.2013,0,-78.5319 0/0:50:49,1:49:1824:1:36:0,-11.4532,-160.79 0/1:72:39,33:39:1499:33:1211:-87.6029,0,-113.495 0/1:62:46,16:46:1725:16:596:-35.3125,0,-136.835 0/1:74:63,11:63:2407:11:417:-15.6043,0,-194.534 dDocent_Contig_7394 123 . T C 1835.14 . AB=0.153846;ABP=16.5402;AC=0;AF=0;AN=12;AO=2;CIGAR=2X;DP=148;DPB=148;DPRA=0;EPP=7.35324;EPPR=174.557;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.5;PAIREDR=0.822785;PAO=0;PQA=0;PQR=0;PRO=0;QA=80;QR=3134;RO=79;RPL=2;RPP=7.35324;RPPR=174.557;RPR=0;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=174.557;SRR=79;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:13:4,2,7:4:162:2,7:80,280:-21.8598,-16.4737,-29.2318,0,-6.77311,-11.2544 0|0:33:23,0,10:23:912:0,10:0,391:-25.607,-32.5307,-107.605,0,-75.4669,-72.4566 0|0:28:9,0,19:9:356:0,19:0,768:-61.0104,-63.7197,-93.0139,0,-29.6921,-23.9726 0|0:23:9,0,13:9:357:0,13:0,519:-40.3143,-43.0235,-72.419,0,-29.6548,-25.7414 0|0:26:16,0,10:16:639:0,10:0,396:-28.1716,-32.9881,-85.6214,0,-53.0303,-50.02 0|0:25:18,0,7:18:708:0,7:0,277:-17.7728,-23.1913,-81.4275,0,-58.6308,-56.5236 dDocent_Contig_7395 14 . C A 63.0325 . AB=0.12766;ABP=59.6072;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=211;DPB=211;DPRA=1.13131;EPP=22.5536;EPPR=435.133;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.888889;PAIREDR=0.713568;PAO=0;PQA=0;PQR=0;PRO=0;QA=352;QR=7817;RO=199;RPL=0;RPP=22.5536;RPPR=435.133;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=199;SRP=435.133;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:32,0:32:1254:0:0:0,-9.63296,-113.126 0/0:37:35,2:35:1410:2:71:0,-4.39653,-120.409 0/0:18:18,0:18:719:0:0:0,-5.41854,-65.034 0/0:49:47,0:47:1788:0:0:0,-14.1484,-160.765 0/1:47:41,6:41:1611:6:240:-7.82613,0,-131.079 0/0:28:26,1:26:1035:1:41:0,-4.4129,-89.3746 dDocent_Contig_7396 14 . C T 1447.7 . AB=0.378571;ABP=20.9405;AC=3;AF=0.25;AN=12;AO=55;CIGAR=1X;DP=276;DPB=276;DPRA=1.16265;EPP=122.441;EPPR=482.906;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2205;QR=8740;RO=221;RPL=0;RPP=122.441;RPPR=482.906;RPR=55;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=221;SRP=482.906;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1095:0:0:0,-8.42884,-98.8352 0/1:64:33,31:33:1290:31:1247:-93.2335,0,-97.0942 0/1:37:21,16:21:822:16:633:-46.1602,0,-63.1519 0/1:39:33,6:33:1322:6:244:-10.5987,0,-107.499 0/0:55:55,0:55:2197:0:0:0,-16.5566,-197.908 0/0:53:51,2:51:2014:2:81:0,-8.26886,-173.762 dDocent_Contig_7397 20 . G C 293.206 . AB=0.205882;ABP=54.1038;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=332;DPB=332;DPRA=1.47619;EPP=46.4397;EPPR=678.338;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.974277;PAO=0;PQA=0;PQR=0;PRO=0;QA=796;QR=12430;RO=311;RPL=0;RPP=46.4397;RPPR=678.338;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=311;SRP=678.338;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:68:54,14:54:2131:14:563:-30.5425,0,-171.491 0/0:69:64,4:64:2550:4:163:0,-5.76492,-214.586 0/0:69:68,1:68:2722:1:41:0,-16.6765,-240.995 0/0:42:41,1:41:1634:1:29:0,-9.7436,-144.39 0/0:71:71,0:71:2862:0:0:0,-21.3731,-257.669 0/0:13:13,0:13:531:0:0:0,-3.91339,-48.1364 dDocent_Contig_7398 1 . N G 108.182 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=116;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:116:-10.8177,-0.90309,0 ./.:.:.:.:.:.:.:. dDocent_Contig_7400 107 . N T 128.53 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=7.37776;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=139;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:139:-12.8527,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_7403 26 . C A 3060.26 . AB=0.339181;ABP=79.8372;AC=4;AF=0.333333;AN=12;AO=128;CIGAR=1X;DP=507;DPB=507;DPRA=0;EPP=280.959;EPPR=823.827;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.6875;PAIREDR=0.679894;PAO=0;PQA=0;PQR=0;PRO=0;QA=5102;QR=15015;RO=378;RPL=0;RPP=280.959;RPPR=823.827;RPR=128;RUN=1;SAF=128;SAP=280.959;SAR=0;SRF=378;SRP=823.827;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:85:64,21:64:2518:21:819:-48.4365,0,-201.175 0/1:120:77,43:77:3092:43:1698:-116.923,0,-242.227 0/1:66:41,25:41:1606:25:1001:-70.5179,0,-124.898 0/1:71:44,27:44:1753:27:1094:-77.3705,0,-136.612 0/0:74:69,5:69:2717:5:203:0,-3.62337,-226.002 0/0:91:83,7:83:3329:7:287:0,-1.29693,-273.454 dDocent_Contig_7404 5 . T A 166.788 . AB=0.285714;ABP=14.1779;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=2X;DP=162;DPB=162;DPRA=0.918919;EPP=22.5536;EPPR=335.246;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.444444;PAIREDR=0.496732;PAO=0;PQA=0;PQR=0;PRO=0;QA=329;QR=5944;RO=153;RPL=0;RPP=22.5536;RPPR=335.246;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=153;SRP=335.246;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:18:18,0:18:701:0:0:0,-5.41854,-63.4241 0|0:32:32,0:32:1237:0:0:0,-9.63296,-111.623 0|0:26:26,0:26:1011:0:0:0,-7.82678,-91.2999 0|0:35:35,0:35:1364:0:0:0,-10.536,-123.042 0|1:28:20,8:20:777:8:292:-18.2017,0,-61.8294 0|0:23:22,1:22:854:1:37:0,-3.22586,-73.4844 dDocent_Contig_7405 110 . A G 78.4041 . AB=0.263158;ABP=12.2676;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=110;DPB=110;DPRA=1.04396;EPP=13.8677;EPPR=231.015;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=52.9429;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.485714;PAO=0;PQA=0;PQR=0;PRO=0;QA=164;QR=3519;RO=105;RPL=0;RPP=13.8677;RPPR=231.015;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=231.015;SRR=105;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:416:0:0:0,-3.61236,-37.4547 0/0:13:13,0:13:425:0:0:0,-3.91339,-33.7995 0/0:14:14,0:14:440:0:0:0,-4.21442,-34.5401 0/0:15:15,0:15:520:0:0:0,-4.51545,-41.9251 0/1:19:14,5:14:487:5:164:-9.36329,0,-35.1858 0/0:37:37,0:37:1231:0:0:0,-11.1381,-110.611 dDocent_Contig_7406 23 . G A 550.024 . AB=0.206107;ABP=101.29;AC=1;AF=0.0833333;AN=12;AO=42;CIGAR=1X;DP=514;DPB=514;DPRA=1.41791;EPP=94.2121;EPPR=1025.77;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.97619;PAIREDR=0.978769;PAO=0;PQA=0;PQR=0;PRO=0;QA=1663;QR=18637;RO=471;RPL=0;RPP=94.2121;RPPR=1025.77;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=471;SRP=1025.77;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:81:76,4:76:2998:4:159:0,-9.71894,-255.241 0/1:131:104,27:104:4146:27:1063:-56.5253,0,-333.686 0/0:64:60,4:60:2399:4:160:0,-4.48249,-201.274 0/0:53:53,0:53:2109:0:0:0,-15.9546,-189.995 0/0:81:81,0:81:3159:0:0:0,-24.3834,-284.398 0/0:104:97,7:97:3826:7:281:0,-5.64515,-318.694 dDocent_Contig_7407 68 . T A 149.766 . AB=0.3;ABP=9.95901;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=278;DPB=278;DPRA=0.752475;EPP=20.3821;EPPR=589.308;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.566667;PAO=0;PQA=0;PQR=0;PRO=0;QA=314;QR=10566;RO=270;RPL=5;RPP=4.09604;RPPR=6.90287;RPR=3;RUN=1;SAF=5;SAP=4.09604;SAR=3;SRF=146;SRP=6.90287;SRR=124;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:45:45,0:45:1725:0:0:0,-13.5463,-155.493 0/0:45:45,0:45:1727:0:0:0,-13.5463,-155.665 0/0:73:73,0:73:2912:0:0:0,-21.9752,-262.191 0/0:39:39,0:39:1514:0:0:0,-11.7402,-136.508 0/1:20:14,6:14:548:6:246:-16.4995,0,-43.6404 0/0:56:54,2:54:2140:2:68:0,-10.402,-186.326 dDocent_Contig_7408 17 . G A 45943.3 . AB=0.0355556;ABP=1267.7;AC=0;AF=0;AN=12;AO=24;CIGAR=1M1D3M1X;DP=1958;DPB=1700.5;DPRA=1.16379;EPP=55.1256;EPPR=891.143;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=936;QR=15947;RO=409;RPL=0;RPP=55.1256;RPPR=891.143;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=409;SRP=891.143;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:251:52,0,191:52:2028:0,191:0,7338:-586.642,-602.296,-768.99,0,-166.684,-109.187 0|0:322:47,0,268:47:1853:0,268:0,10176:-820.178,-834.327,-986.785,0,-152.452,-71.7759 0|0:340:67,1,259:67:2624:1,259:40,9965:-797.852,-814.726,-1030.19,0,-212.473,-137.802 0|0:290:12,0,271:12:468:0,271:0,10476:-899.858,-903.47,-941.938,-43.112,-81.5791,0 0|0:420:131,0,287:131:5075:0,287:0,11041:-866.922,-906.357,-1323.24,0,-416.864,-330.468 0|0:335:100,23,211:100:3899:23,211:896,8071:-632.101,-588.566,-902.117,0,-246.834,-256.955 dDocent_Contig_7409 19 . A T 239.704 . AB=0.157895;ABP=99.5837;AC=3;AF=0.25;AN=12;AO=15;CIGAR=1X;DP=163;DPB=163;DPRA=1.39706;EPP=35.5824;EPPR=324.388;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.648649;PAO=0;PQA=0;PQR=0;PRO=0;QA=614;QR=5886;RO=148;RPL=0;RPP=35.5824;RPPR=324.388;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=148;SRP=324.388;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:34,0:34:1367:0:0:0,-10.235,-123.288 0/1:36:33,3:33:1317:3:123:-0.627708,0,-107.951 0/1:41:33,8:33:1308:8:327:-17.4579,0,-105.636 0/0:26:26,0:26:1024:0:0:0,-7.82678,-92.4515 0/0:8:8,0:8:312:0:0:0,-2.40824,-28.4411 0/1:18:14,4:14:558:4:164:-9.73136,0,-45.1445 dDocent_Contig_7411 76 . C A 5469.19 . AB=0.489842;ABP=3.40734;AC=6;AF=0.5;AN=12;AO=217;CIGAR=1X;DP=443;DPB=443;DPRA=0;EPP=448.522;EPPR=491.592;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.599078;PAIREDR=0.524444;PAO=0;PQA=0;PQR=0;PRO=0;QA=7661;QR=7744;RO=225;RPL=145;RPP=56.3365;RPPR=38.9216;RPR=72;RUN=1;SAF=142;SAP=47.9308;SAR=75;SRF=143;SRP=38.9216;SRR=82;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:47:30,17:30:1056:17:615:-41.5346,0,-81.2022 0/1:86:34,52:34:1200:52:1821:-138.272,0,-82.4153 0/1:31:9,22:9:267:22:783:-61.4601,0,-14.9832 0/1:96:37,59:37:1273:59:2073:-157.935,0,-85.964 0/1:91:67,23:67:2281:23:812:-46.2155,0,-178.361 0/1:92:48,44:48:1667:44:1557:-112.724,0,-122.612 dDocent_Contig_7412 10 . T G 1676.61 . AB=0.165517;ABP=566.635;AC=2;AF=0.166667;AN=12;AO=119;CIGAR=1X1M;DP=1370;DPB=1370;DPRA=0;EPP=261.416;EPPR=2680.44;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4711;QR=49085;RO=1233;RPL=0;RPP=261.416;RPPR=2680.44;RPR=119;RUN=1;SAF=119;SAP=261.416;SAR=0;SRF=1233;SRP=2680.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:99:98,0,1:98:3902:0,1:0,40:0,-29.5009,-350.778,-25.8063,-347.483,-347.182 0|0:183:181,0,1:181:7170:0,1:0,41:0,-54.4864,-644.579,-51.0974,-641.195,-640.894 0|0:77:75,0,1:75:2998:0,1:0,34:0,-22.5772,-269.682,-19.6993,-266.925,-266.624 0|1:95:47,5,43:47:1880:5,43:201,1719:-127.435,-125.02,-278.371,0,-138.29,-141.91 0|0:431:404,7,20:404:16111:7,20:255,783:0,-100.797,-1425.43,-57.2232,-1363.16,-1377.97 0|1:485:428,4,53:428:17024:4,53:162,2094:-43.4474,-158.929,-1559.31,0,-1388.21,-1385.62 dDocent_Contig_7413 107 . N T 57.0026 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=60;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:60:-5.69918,-0.60206,0 dDocent_Contig_7414 64 . T A 3072.69 . AB=0.399425;ABP=33.5856;AC=6;AF=0.5;AN=12;AO=139;CIGAR=1X;DP=348;DPB=348;DPRA=0;EPP=304.845;EPPR=452.505;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.568345;PAIREDR=0.52657;PAO=0;PQA=0;PQR=0;PRO=0;QA=4679;QR=6894;RO=207;RPL=139;RPP=304.845;RPPR=452.505;RPR=0;RUN=1;SAF=139;SAP=304.845;SAR=0;SRF=207;SRP=452.505;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:11,30:11:374:30:992:-77.2414,0,-21.6467 0/1:92:43,49:43:1411:49:1662:-122.174,0,-99.5789 0/1:47:34,13:34:1157:13:444:-26.1386,0,-90.2854 0/1:47:19,26:19:619:26:866:-64.3525,0,-42.1244 0/1:49:40,9:40:1324:9:305:-13.029,0,-104.702 0/1:72:60,12:60:2009:12:410:-15.5549,0,-159.409 dDocent_Contig_7415 42 . G A 618.976 . AB=0.223077;ABP=89.6019;AC=2;AF=0.166667;AN=12;AO=36;CIGAR=1X;DP=408;DPB=408;DPRA=1.35838;EPP=81.1833;EPPR=810.798;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.983871;PAO=0;PQA=0;PQR=0;PRO=0;QA=1435;QR=14593;RO=372;RPL=0;RPP=81.1833;RPPR=810.798;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=372;SRP=810.798;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:43:35,8:35:1387:8:303:-14.6765,0,-112.141 0/0:105:98,7:98:3882:7:284:0,-5.67415,-323.453 0/0:49:49,0:49:1880:0:0:0,-14.7505,-169.411 0/1:87:66,21:66:2577:21:848:-50.4429,0,-205.889 0/0:53:53,0:53:2080:0:0:0,-15.9546,-187.381 0/0:71:71,0:71:2787:0:0:0,-21.3731,-250.947 dDocent_Contig_7416 10 . T C 144.54 . AB=0.0697674;ABP=72.1439;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=2X;DP=241;DPB=241;DPRA=0.432886;EPP=9.52472;EPPR=482.906;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.932127;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=8869;RO=221;RPL=0;RPP=9.52472;RPPR=482.906;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=221;SRP=482.906;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:26:25,0,1:25:978:0,1:0,38:0,-7.52575,-87.9328,-4.02951,-84.8167,-84.5157 0|0:49:42,0,7:42:1686:0,7:0,275:-10.3632,-23.0065,-161.936,0,-139.323,-137.216 0|1:17:13,2,2:13:528:2,2:82,81:-2.85724,0,-42.9464,-0.0939437,-36.8695,-43.0361 0|0:26:21,1,4:21:853:1,4:41,155:-6.39192,-9.32499,-79.3922,0,-66.9648,-69.1449 0|0:88:85,0,3:85:3434:0,3:0,123:0,-25.5875,-308.683,-15.0259,-298.531,-297.627 0|0:35:35,0,0:35:1390:0,0:0,0:0,-10.536,-125.358,-10.536,-125.358,-125.358 dDocent_Contig_7417 82 . C T 2317.56 . AB=0.502674;ABP=3.02191;AC=5;AF=0.416667;AN=12;AO=97;CIGAR=1X;DP=230;DPB=230;DPRA=0;EPP=3.03269;EPPR=291.816;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0721649;PAIREDR=0.984962;PAO=0;PQA=0;PQR=0;PRO=0;QA=3390;QR=4565;RO=133;RPL=97;RPP=213.643;RPPR=291.816;RPR=0;RUN=1;SAF=49;SAP=3.03269;SAR=48;SRF=133;SRP=291.816;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:43:40,3:40:1369:3:105:0,-3.1484,-113.713 0/1:41:21,20:21:717:20:704:-51.3415,0,-52.5057 0/1:33:15,18:15:519:18:634:-47.4523,0,-37.1045 0/1:39:30,9:30:1021:9:321:-17.4929,0,-80.4554 0/1:34:12,22:12:419:22:750:-57.5784,0,-27.8095 0/1:40:15,25:15:520:25:876:-67.1125,0,-35.088 dDocent_Contig_7418 31 . T C 118.799 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=122;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:93:-8.6776,-0.90309,0 ./.:.:.:.:.:.:.:. dDocent_Contig_7419 31 . A C 645.042 . AB=0.202532;ABP=124.448;AC=3;AF=0.25;AN=12;AO=32;CIGAR=1X;DP=276;DPB=276;DPRA=1.33898;EPP=72.4974;EPPR=532.85;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.967213;PAO=0;PQA=0;PQR=0;PRO=0;QA=1291;QR=9543;RO=244;RPL=0;RPP=72.4974;RPPR=532.85;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=244;SRP=532.85;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:55:37,18:37:1410:18:719:-48.4762,0,-110.601 0/0:57:57,0:57:2250:0:0:0,-17.1587,-202.672 0/1:42:38,4:38:1512:4:163:-2.41517,0,-123.685 0/1:61:51,10:51:1988:10:409:-18.8077,0,-160.754 0/0:31:31,0:31:1198:0:0:0,-9.33193,-108.095 0/0:30:30,0:30:1185:0:0:0,-9.0309,-106.928 dDocent_Contig_7420 7 . T C 289.058 . AB=0.104396;ABP=745.224;AC=2;AF=0.166667;AN=12;AO=119;CIGAR=1X;DP=1653;DPB=1653;DPRA=0;EPP=261.416;EPPR=3312.36;GTI=0;LEN=1;MEANALT=1.33333;MQM=58.6303;MQMR=59.6221;NS=6;NUMALT=1;ODDS=0;PAIRED=0.092437;PAIREDR=0.78329;PAO=0;PQA=0;PQR=0;PRO=0;QA=4579;QR=58152;RO=1532;RPL=0;RPP=261.416;RPPR=3329.71;RPR=119;RUN=1;SAF=119;SAP=261.416;SAR=0;SRF=1530;SRP=3312.36;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:178:164,13:164:6223:13:498:0,-8.29129,-507.22 0/1:319:282,36:282:10668:36:1382:-27.552,0,-861.442 0/1:227:206,21:206:7850:21:816:-4.57543,0,-637.986 0/0:301:276,25:276:10544:25:963:0,-5.44927,-860.11 0/0:283:276,7:276:10455:7:272:0,-60.3443,-913.974 0/0:345:328,17:328:12412:17:648:0,-45.2382,-1057.91 dDocent_Contig_7421 7 . T C 5135.17 . AB=0.0892857;ABP=2054.28;AC=2;AF=0.166667;AN=12;AO=125;CIGAR=1X17M;DP=1400;DPB=1400.06;DPRA=0;EPP=274.444;EPPR=607.782;GTI=0;LEN=1;MEANALT=27.3333;MQM=60;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=1;PAIREDR=0.884735;PAO=0;PQA=0;PQR=0;PRO=0;QA=4800;QR=12530;RO=321;RPL=0;RPP=274.444;RPPR=700.053;RPR=125;RUN=1;SAF=125;SAP=274.444;SAR=0;SRF=310;SRP=607.782;SRR=11;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:164:49,8,9,4,4,11,2,4,10,13:49:1920:8,9,4,4,11,2,4,10,13:302,341,160,157,420,79,163,393,497:-26.032,-16.0304,-171.515,-12.8238,-145.965,-168.007,-27.601,-160.742,-157.536,-184.289,-35.5702,-168.709,-165.503,-180.28,-192.256,-6.32414,-139.466,-136.259,-151.036,-159.003,-160.906,-34.2814,-167.422,-164.216,-178.993,-186.96,-157.716,-191.572,-27.3337,-160.475,-157.268,-172.045,-180.012,-150.769,-178.726,-184.022,-8.45971,-141.601,-138.395,-153.172,-161.139,-131.896,-159.852,-152.905,-163.343,0,-133.142,-129.935,-144.712,-152.68,-123.436,-151.392,-144.445,-125.572,-153.98 0|0:266:72,16,13,50,19,5,10,5,4,11:72:2825:16,13,50,19,5,10,5,4,11:595,487,1955,750,196,392,191,146,425:-139.079,-112.052,-339.584,-120.867,-304.514,-349.301,0,-183.655,-192.469,-217.304,-147.349,-330.99,-339.804,-218.948,-373.969,-144.635,-328.282,-337.096,-216.237,-363.571,-375.476,-128.518,-312.165,-320.979,-200.12,-347.455,-344.747,-357.855,-145.083,-328.73,-337.544,-216.685,-364.019,-361.311,-345.195,-375.924,-148.829,-332.475,-341.29,-220.431,-367.764,-365.057,-348.94,-365.505,-379.971,-125.844,-309.492,-318.306,-197.446,-344.781,-342.073,-325.957,-342.521,-346.267,-354.88 0|0:188:53,3,1,17,13,4,4,20,19,10:53:2077:3,1,17,13,4,4,20,19,10:103,39,668,515,150,155,808,731,388:-50.6676,-58.2605,-228.165,-63.416,-225.862,-233.922,-11.6715,-174.12,-179.276,-177.364,-59.4979,-221.936,-227.092,-175.352,-226.384,-54.3349,-216.781,-221.936,-170.195,-218.011,-223.938,-53.8873,-216.333,-221.489,-169.747,-217.564,-212.408,-223.491,0,-162.45,-167.605,-115.863,-163.682,-158.524,-158.077,-164.791,-6.61243,-169.061,-174.216,-122.474,-170.293,-165.136,-164.688,-110.804,-171.703,-34.7392,-197.186,-202.342,-150.6,-198.417,-193.261,-192.813,-138.929,-145.541,-202.537 0|0:292:74,11,13,31,27,17,5,6,8,21:74:2869:11,13,31,27,17,5,6,8,21:404,496,1149,1042,659,149,243,325,804:-71.7211,-60.9705,-293.374,-53.3015,-255.991,-285.103,0,-202.692,-195.023,-226.386,-75.4776,-278.16,-270.491,-217.194,-303.056,-39.8615,-242.552,-234.883,-181.584,-257.052,-270.46,-82.1043,-284.792,-277.124,-223.825,-299.292,-263.685,-316.313,-73.9577,-276.646,-268.978,-215.679,-291.146,-255.539,-297.779,-307.866,-67.1885,-269.878,-262.209,-208.91,-284.377,-248.77,-291.01,-282.865,-300.495,-28.0089,-230.699,-223.031,-169.731,-245.2,-209.592,-251.832,-243.686,-236.918,-257.404 0|0:283:43,7,12,17,0,46,19,5,3,42:43:1690:7,12,17,0,46,19,5,3,42:234,457,664,0,1794,742,201,120,1620:-134.525,-128.525,-265.433,-109.981,-230.052,-245.384,-92.8802,-212.952,-194.408,-226.778,-147.469,-267.54,-248.996,-231.896,-286.484,0,-120.074,-101.529,-84.4288,-139.018,-125.17,-86.4754,-206.547,-188.003,-170.903,-225.491,-78.024,-219.772,-130.904,-250.975,-232.431,-215.331,-269.919,-122.453,-208.926,-268.414,-137.584,-257.655,-239.111,-222.011,-276.599,-129.132,-215.606,-260.034,-275.695,-14.4244,-134.498,-115.953,-98.8529,-153.442,-5.97294,-92.4481,-136.877,-143.556,-140.798 0|1:207:30,7,36,6,1,19,5,2,4,28:30:1149:7,36,6,1,19,5,2,4,28:244,1363,230,40,748,203,80,155,1066:-102.714,-91.9022,-184.082,0,-74.4465,-83.4518,-92.8685,-167.314,-75.4127,-185.35,-111.237,-185.682,-93.7818,-186.649,-205.224,-50.207,-124.653,-32.7512,-125.619,-143.988,-138.776,-95.0011,-169.446,-77.5453,-170.413,-188.781,-127.752,-187.784,-105.154,-179.599,-87.6985,-180.566,-198.934,-137.905,-182.698,-198.84,-99.0118,-173.457,-81.556,-174.423,-192.792,-131.763,-176.556,-186.709,-192.095,-24.302,-98.7481,-6.84612,-99.7144,-118.083,-57.0531,-101.847,-112,-105.858,-110.162 dDocent_Contig_7422 9 . C T 756.116 . AB=0.267717;ABP=62.5292;AC=3;AF=0.25;AN=12;AO=39;CIGAR=1X;DP=242;DPB=242;DPRA=0;EPP=87.6977;EPPR=443.819;GTI=0;LEN=1;MEANALT=1;MQM=58.9231;MQMR=58.4778;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1495;QR=7807;RO=203;RPL=0;RPP=87.6977;RPPR=443.819;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=203;SRP=443.819;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:25,2:25:949:2:79:0,-0.630178,-78.1698 0/0:42:41,1:41:1580:1:39:0,-10.8466,-140.328 0/0:46:44,2:44:1694:2:74:0,-6.82195,-145.47 0/1:32:29,3:29:1129:3:117:-1.27742,0,-92.1939 0/1:35:19,16:19:736:16:613:-44.9713,0,-55.9158 0/1:60:45,15:45:1719:15:573:-33.8486,0,-136.81 dDocent_Contig_7423 98 . N T 68.1266 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=73;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:73:-6.81212,-0.90309,0 ./.:.:.:.:.:.:.:. dDocent_Contig_7424 10 . G A 3180.49 . AB=0.170923;ABP=481.779;AC=3;AF=0.25;AN=12;AO=87;CIGAR=1X1M;DP=509;DPB=509;DPRA=0;EPP=191.928;EPPR=671.824;GTI=0;LEN=1;MEANALT=3.5;MQM=59.023;MQMR=59.9773;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0.564935;PAO=0;PQA=0;PQR=0;PRO=0;QA=3450;QR=12297;RO=308;RPL=0;RPP=191.928;RPPR=671.824;RPR=87;RUN=1;SAF=87;SAP=191.928;SAR=0;SRF=308;SRP=671.824;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:47:32,4,1,10:32:1289:4,1,10:157,41,381:-21.5492,-18.2671,-123.316,-27.7963,-121.136,-133.747,0,-93.3328,-102.86,-103.234 0|0:73:39,8,15,11:39:1538:8,15,11:322,595,419:-37.235,-22.434,-146.551,0,-99.9861,-122.01,-14.6227,-114.604,-92.1704,-137.832 0|0:69:32,4,25,6:32:1276:4,25,6:163,998,244:-72.5555,-68.7404,-172.615,0,-91.6262,-97.5484,-62.0609,-153.692,-84.9468,-165.333 0|0:61:23,7,25,6:23:902:7,25,6:281,994,244:-74.9086,-58.6777,-130.737,0,-51.0065,-66.6361,-61.7045,-112.716,-54.0334,-134.065 0|1:118:93,1,6,18:93:3719:1,6,18:41,229,723:-31.5889,-56.2001,-362.23,-40.8052,-343.748,-345.326,0,-302.958,-287.558,-300.923 0|1:141:89,4,10,36:89:3573:4,10,36:154,408,1439:-91.434,-105.583,-398.782,-84.5608,-366.323,-375.956,0,-281.76,-260.739,-283.566 dDocent_Contig_7425 28 . T A 74.0903 . AB=0.166667;ABP=37.7539;AC=3;AF=0.25;AN=12;AO=8;CIGAR=1X;DP=142;DPB=142;DPRA=1.69333;EPP=20.3821;EPPR=291.816;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.969925;PAO=0;PQA=0;PQR=0;PRO=0;QA=312;QR=5296;RO=133;RPL=0;RPP=20.3821;RPPR=291.816;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=133;SRP=291.816;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:10:7,3:7:283:3:123:-8.45449,0,-22.8333 0/1:7:6,1:6:240:1:41:-1.98736,0,-19.8679 0/1:19:17,2:17:666:2:82:-2.06011,0,-54.5512 0/0:15:15,0:15:607:0:0:0,-4.51545,-54.9681 0/0:40:38,1:38:1510:1:25:0,-9.56508,-133.568 0/0:51:50,1:50:1990:1:41:0,-11.258,-175.197 dDocent_Contig_7426 47 . G C 39.9036 . AB=0.166667;ABP=20.3821;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=143;DPB=143;DPRA=0.72;EPP=9.52472;EPPR=307.016;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.871429;PAO=0;PQA=0;PQR=0;PRO=0;QA=114;QR=5397;RO=140;RPL=0;RPP=9.52472;RPPR=307.016;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=140;SRP=307.016;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:18:15,3:15:585:3:114:-5.21217,0,-47.5731 0/0:16:16,0:16:641:0:0:0,-4.81648,-58.0255 0/0:32:32,0:32:1234:0:0:0,-9.63296,-111.344 0/0:28:28,0:28:1046:0:0:0,-8.42884,-94.4167 0/0:24:24,0:24:931:0:0:0,-7.22472,-84.0925 0/0:25:25,0:25:960:0:0:0,-7.52575,-86.7075 dDocent_Contig_7428 10 . G A 185.53 . AB=0.0384615;ABP=147.33;AC=0;AF=0;AN=12;AO=5;CIGAR=1X2M1X2M1X2M1X1M2X2M1X2M1X;DP=199;DPB=199;DPRA=1.23596;EPP=13.8677;EPPR=319.724;GTI=0;LEN=1;MEANALT=2.66667;MQM=52;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.852071;PAO=0;PQA=0;PQR=0;PRO=0;QA=193;QR=6526;RO=169;RPL=0;RPP=13.8677;RPPR=369.989;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=163;SRP=319.724;SRR=6;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:28:23,2,0,0,2:23:897:2,0,0,2:18,0,0,82:0,-6.53547,-79.6474,-6.92369,-80.2495,-80.7529,-6.92369,-80.2495,-80.7529,-80.7529,-0.0630658,-73.4799,-73.9816,-73.9816,-73.3795 0|0:34:25,1,1,0,6:25:958:1,1,0,6:9,40,0,239:-12.227,-19.5267,-97.8343,-16.4733,-94.8599,-94.8126,-19.7528,-98.1353,-95.1136,-98.3893,0,-78.4522,-75.4282,-78.7041,-76.8979 0|0:44:34,0,2,6,2:34:1326:0,2,6,2:0,75,240,77:-9.54721,-19.7822,-128.772,-13.6704,-122.656,-122.054,0,-109,-102.885,-107.194,-13.4618,-122.45,-116.334,-102.678,-121.848 0|0:44:43,0,0,0,0:43:1665:0,0,0,0:0,0,0,0:0,-12.9443,-149.691,-12.9443,-149.691,-149.691,-12.9443,-149.691,-149.691,-149.691,-12.9443,-149.691,-149.691,-149.691,-149.691 0|0:32:30,0,2,0,0:30:1154:0,2,0,0:0,78,0,0:0,-9.0309,-103.765,-2.2643,-97.3856,-96.7835,-9.0309,-103.765,-97.3856,-103.765,-9.0309,-103.765,-97.3856,-103.765,-103.765 0|0:17:14,3,0,0,0:14:526:3,0,0,0:18,0,0,0:0,-4.11719,-46.6783,-4.21442,-47.5814,-47.583,-4.21442,-47.5814,-47.583,-47.583,-4.21442,-47.5814,-47.583,-47.583,-47.583 dDocent_Contig_7429 34 . G A 6172.8 . AB=0.448852;ABP=13.8949;AC=4;AF=0.333333;AN=12;AO=215;CIGAR=1X;DP=521;DPB=521;DPRA=5.70238;EPP=469.877;EPPR=667.481;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990196;PAO=0;PQA=0;PQR=0;PRO=0;QA=8533;QR=12164;RO=306;RPL=0;RPP=469.877;RPPR=667.481;RPR=215;RUN=1;SAF=215;SAP=469.877;SAR=0;SRF=306;SRP=667.481;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:94:41,53:41:1614:53:2085:-159.537,0,-117.202 0/1:206:121,85:121:4835:85:3385:-242.69,0,-373.026 0/1:79:50,29:50:1957:29:1152:-80.1828,0,-152.537 0/1:100:52,48:52:2080:48:1911:-142.093,0,-157.285 0/0:38:38,0:38:1524:0:0:0,-11.4391,-137.401 0/0:4:4,0:4:154:0:0:0,-1.20412,-14.2318 dDocent_Contig_7430 49 . T C 430.544 . AB=0.288136;ABP=26.0132;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=355;DPB=355;DPRA=0.996622;EPP=39.9253;EPPR=736.968;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.857988;PAO=0;PQA=0;PQR=0;PRO=0;QA=689;QR=13092;RO=338;RPL=0;RPP=39.9253;RPPR=736.968;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=338;SRP=736.968;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1569:0:0:0,-12.3422,-141.455 0/0:99:99,0:99:3796:0:0:0,-29.802,-341.698 0/0:75:75,0:75:2917:0:0:0,-22.5772,-262.657 0/0:52:52,0:52:2033:0:0:0,-15.6536,-183.173 0/0:29:29,0:29:1135:0:0:0,-8.72987,-102.442 0/1:59:42,17:42:1642:17:689:-44.5772,0,-130.272 dDocent_Contig_7431 10 . C T 176.779 . AB=0.175439;ABP=55.1637;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=157;DPB=157;DPRA=2.85;EPP=24.725;EPPR=322.217;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9184;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.693878;PAO=0;PQA=0;PQR=0;PRO=0;QA=400;QR=5883;RO=147;RPL=0;RPP=24.725;RPPR=322.217;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=147;SRP=322.217;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:6:6,0:6:243:0:0:0,-1.80618,-22.2482 0/0:41:41,0:41:1645:0:0:0,-12.3422,-148.276 0/0:8:8,0:8:316:0:0:0,-2.40824,-28.8047 0/0:24:24,0:24:938:0:0:0,-7.22472,-84.7136 0/1:57:47,10:47:1893:10:400:-19.2008,0,-153.406 0/0:21:21,0:21:848:0:0:0,-6.32163,-76.6314 dDocent_Contig_7432 107 . N C 195.273 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=206;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:5:0,5:0:0:5:171:-15.7265,-1.50515,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_7433 21 . A T 564.182 . AB=0.167488;ABP=197.961;AC=3;AF=0.25;AN=12;AO=36;CIGAR=1X;DP=750;DPB=750;DPRA=0.320569;EPP=81.1833;EPPR=1553.44;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.973389;PAO=0;PQA=0;PQR=0;PRO=0;QA=1408;QR=28404;RO=714;RPL=0;RPP=81.1833;RPPR=1553.44;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=714;SRP=1553.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:38,4:38:1529:4:158:-1.9561,0,-125.203 0/1:85:78,7:78:3119:7:281:-0.0747948,0,-255.2 0/0:90:88,2:88:3530:2:75:0,-19.9739,-310.613 0/1:76:53,23:53:2085:23:894:-57.8794,0,-164.961 0/0:258:258,0:258:10240:0:0:0,-77.6657,-920.958 0/0:199:199,0:199:7901:0:0:0,-59.905,-710.66 dDocent_Contig_7434 33 . T C 7493.18 . AB=0.293189;ABP=379.344;AC=4;AF=0.333333;AN=12;AO=312;CIGAR=1X;DP=1317;DPB=1317;DPRA=0;EPP=680.51;EPPR=2181;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.99359;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=12331;QR=37405;RO=1003;RPL=0;RPP=680.51;RPPR=2181;RPR=312;RUN=1;SAF=312;SAP=680.51;SAR=0;SRF=1003;SRP=2181;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:228:205,22:205:7716:22:845:-7.6163,0,-625.529 0/0:218:207,11:207:7662:11:393:0,-29.9369,-653.72 0/0:86:82,4:82:3073:4:149:0,-12.1172,-262.939 0/1:330:267,63:267:9956:63:2541:-129.479,0,-796.39 0/1:232:83,149:83:3099:149:5939:-464.463,0,-209.234 0/1:223:159,63:159:5899:63:2464:-154.982,0,-463.946 dDocent_Contig_7435 32 . G C 343.637 . AB=0.148148;ABP=61.0771;AC=3;AF=0.25;AN=12;AO=8;CIGAR=20M1X;DP=129;DPB=131.857;DPRA=0;EPP=20.3821;EPPR=228.843;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.951923;PAO=0;PQA=0;PQR=0;PRO=0;QA=303;QR=4080;RO=104;RPL=0;RPP=20.3821;RPPR=228.843;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=104;SRP=228.843;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:17:15,2,0:15:592:2,0:77,0:-2.19132,0,-48.5029,-6.70677,-49.105,-55.426 0|1:22:19,0,2:19:740:0,2:0,81:-0.962888,-6.68246,-67.4882,0,-60.8077,-60.2056 0|0:31:22,8,0:22:863:8,0:311,0:-18.9296,0,-68.5644,-25.5523,-70.9727,-96.5252 0|0:27:22,5,0:22:864:5,0:194,0:-9.70347,0,-69.9488,-16.3261,-71.454,-87.3916 0|1:12:11,0,1:11:432:0,1:0,40:-0.383319,-3.69465,-39.2193,0,-35.9236,-35.6226 0|1:20:15,0,5:15:589:0,5:0,182:-10.7094,-15.2248,-63.6881,0,-48.8341,-47.329 dDocent_Contig_7437 26 . T C 213.692 . AB=0.17;ABP=97.5996;AC=3;AF=0.25;AN=12;AO=18;CIGAR=1X;DP=171;DPB=171;DPRA=1.11321;EPP=42.0968;EPPR=335.246;GTI=0;LEN=1;MEANALT=1;MQM=46.2778;MQMR=59.817;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.915033;PAO=0;PQA=0;PQR=0;PRO=0;QA=712;QR=6036;RO=153;RPL=0;RPP=42.0968;RPPR=335.246;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=153;SRP=335.246;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:17,1:17:675:1:41:0,-1.37003,-57.0314 0/1:39:30,9:30:1177:9:346:-19.5357,0,-94.2764 0/0:27:27,0:27:1081:0:0:0,-8.12781,-97.5792 0/1:39:33,6:33:1310:6:243:-5.04692,0,-106.416 0/1:22:20,2:20:810:2:82:-1.0695,0,-66.5929 0/0:26:26,0:26:983:0:0:0,-7.82678,-88.7544 dDocent_Contig_7438 21 . A G 717.303 . AB=0.22973;ABP=96.9118;AC=4;AF=0.333333;AN=12;AO=36;CIGAR=1X;DP=238;DPB=238;DPRA=0.715385;EPP=81.1833;EPPR=441.648;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.555556;PAIREDR=0.613861;PAO=0;PQA=0;PQR=0;PRO=0;QA=1427;QR=7993;RO=202;RPL=0;RPP=81.1833;RPPR=441.648;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=202;SRP=441.648;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:19,12:19:768:12:472:-33.4945,0,-60.1088 0/1:55:50,5:50:1983:5:192:-1.09079,0,-162.112 0/1:28:23,5:23:919:5:202:-10.1327,0,-74.5856 0/1:34:22,12:22:874:12:480:-33.3162,0,-68.7355 0/0:52:52,0:52:2003:0:0:0,-15.6536,-180.452 0/0:38:36,2:36:1446:2:81:0,-3.75341,-122.703 dDocent_Contig_7440 26 . T C 124.778 . AB=0.214286;ABP=22.8638;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=171;DPB=171;DPRA=0.979021;EPP=16.0391;EPPR=361.303;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.727273;PAO=0;PQA=0;PQR=0;PRO=0;QA=245;QR=6040;RO=165;RPL=0;RPP=16.0391;RPPR=361.303;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=165;SRP=361.303;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:795:0:0:0,-6.32163,-71.8747 0/0:31:31,0:31:1087:0:0:0,-9.33193,-98.127 0/0:22:22,0:22:805:0:0:0,-6.62266,-72.7693 0/0:51:51,0:51:1864:0:0:0,-15.3525,-168.017 0/1:28:22,6:22:796:6:245:-14.0006,0,-63.5231 0/0:18:18,0:18:693:0:0:0,-5.41854,-62.7024 dDocent_Contig_7441 91 . A T 2555.84 . AB=0.742188;ABP=68.2223;AC=2;AF=0.166667;AN=12;AO=95;CIGAR=1X;DP=150;DPB=150;DPRA=11.6364;EPP=209.3;EPPR=122.441;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3296;QR=1888;RO=55;RPL=95;RPP=209.3;RPPR=122.441;RPR=0;RUN=1;SAF=95;SAP=209.3;SAR=0;SRF=55;SRP=122.441;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:6:6,0:6:210:0:0:0,-1.80618,-19.2425 0/0:7:7,0:7:242:0:0:0,-2.10721,-22.1176 0/0:3:3,0:3:101:0:0:0,-0.90309,-9.42373 0/0:6:6,0:6:197:0:0:0,-1.80618,-18.0527 0/1:47:5,42:5:175:42:1457:-117.28,0,-1.94528 0/1:81:28,53:28:963:53:1839:-141.412,0,-62.5986 dDocent_Contig_7442 55 . G A 126.801 . AB=0.135417;ABP=113.846;AC=3;AF=0.25;AN=12;AO=14;CIGAR=1X;DP=198;DPB=198;DPRA=1.12295;EPP=33.4109;EPPR=402.561;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.478261;PAO=0;PQA=0;PQR=0;PRO=0;QA=548;QR=7092;RO=184;RPL=14;RPP=33.4109;RPPR=402.561;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=184;SRP=402.561;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:27:24,3:24:922:3:113:-2.41149,0,-75.1689 0/0:28:28,0:28:1059:0:0:0,-8.42884,-95.6155 0/1:28:25,3:25:986:3:116:-2.38815,0,-80.6128 0/0:41:40,1:40:1576:1:41:0,-8.24766,-137.993 0/0:33:33,0:33:1260:0:0:0,-9.93399,-113.675 0/1:41:34,7:34:1289:7:278:-13.0481,0,-103.934 dDocent_Contig_7443 10 . C G 288.112 . AB=0.144737;ABP=169.642;AC=3;AF=0.25;AN=12;AO=25;CIGAR=1X;DP=327;DPB=327;DPRA=0.840164;EPP=57.2971;EPPR=658.795;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.24;PAIREDR=0.384106;PAO=0;PQA=0;PQR=0;PRO=0;QA=974;QR=12075;RO=302;RPL=0;RPP=57.2971;RPPR=658.795;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=302;SRP=658.795;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:53:50,3:50:2000:3:121:0,-4.67439,-168.908 0/1:71:59,12:59:2373:12:483:-22.447,0,-192.343 0/1:45:41,4:41:1643:4:147:-0.0383726,0,-134.551 0/1:36:30,6:30:1200:6:223:-9.58529,0,-97.437 0/0:45:45,0:45:1783:0:0:0,-13.5463,-160.684 0/0:77:77,0:77:3076:0:0:0,-23.1793,-276.911 dDocent_Contig_7444 16 . G A 348.295 . AB=0.126582;ABP=98.6925;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X4M;DP=336;DPB=336;DPRA=0.707831;EPP=42.0968;EPPR=643.595;GTI=0;LEN=1;MEANALT=2.25;MQM=60;MQMR=58.9017;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.962712;PAO=0;PQA=0;PQR=0;PRO=0;QA=705;QR=11463;RO=295;RPL=0;RPP=42.0968;RPPR=643.595;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=295;SRP=643.595;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:47:40,0,0,7,0:40:1553:0,0,7,0:0,0,283,0:-11.695,-23.7362,-151.315,-23.7362,-151.315,-151.315,0,-127.981,-127.981,-125.873,-23.7362,-151.315,-151.315,-127.981,-151.315 0|0:72:61,5,0,5,1:61:2388:5,0,5,1:195,0,180,10:0,-2.30137,-197.208,-18.3628,-198.713,-214.742,-3.67394,-184.035,-200.063,-198.558,-17.7888,-198.119,-214.147,-199.468,-213.846 0|0:84:78,0,0,3,0:78:3049:0,0,3,0:0,0,119,0:0,-23.4803,-271.055,-23.4803,-271.055,-271.055,-13.6052,-261.259,-261.259,-260.356,-23.4803,-271.055,-271.055,-261.259,-271.055 0|0:83:81,0,0,0,0:81:3122:0,0,0,0:0,0,0,0:0,-24.3834,-280.871,-24.3834,-280.871,-280.871,-24.3834,-280.871,-280.871,-280.871,-24.3834,-280.871,-280.871,-280.871,-280.871 0|0:18:11,0,0,0,7:11:431:0,0,0,7:0,0,0,281:-20.2431,-23.5544,-58.9901,-23.5544,-58.9901,-58.9901,-23.5544,-58.9901,-58.9901,-58.9901,0,-35.833,-35.833,-35.833,-33.7258 0|0:32:24,0,5,3,0:24:920:0,5,3,0:0,199,123,0:-8.11335,-15.3381,-76.4895,0,-61.1223,-59.6172,-5.17283,-66.3295,-50.9598,-65.4264,-15.3381,-76.4895,-61.1223,-66.3295,-76.4895 dDocent_Contig_7445 11 . T C 47.6876 . AB=0.214286;ABP=12.937;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=208;DPB=208;DPRA=0.886667;EPP=24.725;EPPR=432.962;GTI=0;LEN=1;MEANALT=1;MQM=54.7;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.1;PAIREDR=0.787879;PAO=0;PQA=0;PQR=0;PRO=0;QA=395;QR=7947;RO=198;RPL=0;RPP=24.725;RPPR=432.962;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=198;SRP=432.962;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:39,2:39:1575:2:81:0,-4.68351,-134.325 0/0:41:38,3:38:1520:3:119:0,-1.27524,-125.978 0/1:14:11,3:11:442:3:113:-6.29159,0,-35.921 0/0:37:35,2:35:1404:2:82:0,-3.38846,-118.861 0/0:29:29,0:29:1171:0:0:0,-8.72987,-105.667 0/0:46:46,0:46:1835:0:0:0,-13.8474,-165.361 dDocent_Contig_7446 33 . A G 1018.9 . AB=0.178683;ABP=289.08;AC=5;AF=0.416667;AN=12;AO=59;CIGAR=1X;DP=349;DPB=349;DPRA=0;EPP=98.7391;EPPR=632.737;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.355932;PAIREDR=0.475862;PAO=0;PQA=0;PQR=0;PRO=0;QA=2360;QR=11552;RO=290;RPL=0;RPP=131.127;RPPR=632.737;RPR=59;RUN=1;SAF=55;SAP=98.7391;SAR=4;SRF=290;SRP=632.737;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:50:43,7:43:1704:7:279:-10.4278,0,-138.527 0/1:71:52,19:52:2055:19:770:-48.2455,0,-163.771 0/1:49:44,5:44:1759:5:202:-3.81103,0,-143.777 0/1:90:71,19:71:2828:19:757:-41.3612,0,-227.531 0/0:30:28,2:28:1106:2:78:0,-1.6276,-92.4162 0/1:59:52,7:52:2100:7:274:-7.26555,0,-171.417 dDocent_Contig_7447 26 . T C 85.644 . AB=0.121495;ABP=136.16;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=386;DPB=386;DPRA=0.829384;EPP=35.5824;EPPR=808.627;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.133333;PAIREDR=0.598383;PAO=0;PQA=0;PQR=0;PRO=0;QA=549;QR=14655;RO=371;RPL=0;RPP=35.5824;RPPR=808.627;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=371;SRP=808.627;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:47,7:47:1870:7:264:-7.86303,0,-152.252 0/1:53:47,6:47:1881:6:217:-3.92236,0,-153.539 0/0:68:66,2:66:2525:2:68:0,-14.0154,-220.927 0/0:85:85,0:85:3401:0:0:0,-25.5875,-306.132 0/0:54:54,0:54:2141:0:0:0,-16.2556,-192.87 0/0:72:72,0:72:2837:0:0:0,-21.6742,-255.435 dDocent_Contig_7448 18 . T C 66.851 . AB=0.142857;ABP=41.7866;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=212;DPB=212;DPRA=1.392;EPP=16.0391;EPPR=450.334;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=0.597087;PAO=0;PQA=0;PQR=0;PRO=0;QA=245;QR=8234;RO=206;RPL=0;RPP=16.0391;RPPR=450.334;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=206;SRP=450.334;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:38,0:38:1534:0:0:0,-11.4391,-138.297 0/0:52:51,1:51:2016:1:41:0,-11.559,-177.538 0/0:13:13,0:13:524:0:0:0,-3.91339,-47.5068 0/1:35:30,5:30:1176:5:204:-8.20798,0,-95.5745 0/0:39:39,0:39:1564:0:0:0,-11.7402,-140.996 0/0:35:35,0:35:1420:0:0:0,-10.536,-128.048 dDocent_Contig_7449 1 . N G 599.632 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=21;CIGAR=1X;DP=21;DPB=21;DPRA=0;EPP=48.6112;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=38.0952;MQMR=0;NS=6;NUMALT=1;ODDS=3.38813e-21;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=723;QR=0;RO=0;RPL=0;RPP=48.6112;RPPR=0;RPR=21;RUN=1;SAF=0;SAP=48.6112;SAR=21;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.19904,-0.30103,0 1/1:4:0,4:0:0:4:134:-11.7944,-1.20412,0 1/1:7:0,7:0:0:7:242:-21.7809,-2.10721,0 1/1:5:0,5:0:0:5:172:-15.6007,-1.50515,0 1/1:1:0,1:0:0:1:35:-1.79155,-0.30103,0 1/1:3:0,3:0:0:3:105:-5.01635,-0.90309,0 dDocent_Contig_7451 9 . C T 119.991 . AB=0.111702;ABP=249.218;AC=3;AF=0.25;AN=12;AO=26;CIGAR=1X;DP=332;DPB=332;DPRA=2.17143;EPP=59.4686;EPPR=667.481;GTI=0;LEN=1;MEANALT=1;MQM=59.4615;MQMR=55.0229;NS=6;NUMALT=1;ODDS=0;PAIRED=0.230769;PAIREDR=0.464052;PAO=0;PQA=0;PQR=0;PRO=0;QA=998;QR=11771;RO=306;RPL=0;RPP=59.4686;RPPR=667.481;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=306;SRP=667.481;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:51:46,5:46:1771:5:184:-1.56359,0,-142.77 0/0:69:67,2:67:2581:2:78:0,-13.3676,-221.164 0/0:28:28,0:28:1079:0:0:0,-8.42884,-96.0049 0/0:47:44,3:44:1683:3:117:0,-3.25064,-139.685 0/1:50:45,5:45:1738:5:194:-2.76891,0,-140.319 0/1:87:76,11:76:2919:11:425:-12.4148,0,-234.357 dDocent_Contig_7452 25 . T C 32983.9 . AB=0.10152;ABP=2543.5;AC=0;AF=0;AN=12;AO=187;CIGAR=1M3I7M1X1M;DP=2824;DPB=3311.8;DPRA=0;EPP=409.076;EPPR=2702.15;GTI=0;LEN=1;MEANALT=8.75;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7206;QR=48374;RO=1243;RPL=0;RPP=409.076;RPPR=2702.15;RPR=187;RUN=1;SAF=187;SAP=409.076;SAR=0;SRF=1243;SRP=2702.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:389:232,62,75,12:232:9007:62,75,12:2361,2926,425:-170.672,-46.8722,-768.277,0,-546.441,-717.499,-205.897,-752.326,-705.461,-942.348 0|0:441:224,46,90,55:224:8687:46,90,55:1775,3399,1899:-211.107,-132.782,-832.637,0,-567.951,-686.611,-124.286,-692.229,-559.45,-821.424 0|0:582:301,43,144,45:301:11757:43,144,45:1672,5619,1642:-371.237,-324.459,-1278.04,0,-829.147,-923.186,-327.711,-1156.85,-832.397,-1280.69 0|0:430:195,36,171,19:195:7598:36,171,19:1398,6545,673:-478.324,-422.157,-1035.81,0,-509.626,-573.016,-482.215,-991.832,-569.683,-1100.98 0|0:496:143,0,349,0:143:5545:0,349,0:0,13579,0:-1072.85,-1115.9,-1571.45,0,-455.626,-350.566,-1115.9,-1571.45,-455.626,-1571.45 0|0:486:148,0,336,0:148:5780:0,336,0:0,12801,0:-1005.42,-1049.97,-1525.13,0,-475.295,-374.149,-1049.97,-1525.13,-475.295,-1525.13 dDocent_Contig_7453 37 . A G 3413.15 . AB=0.26178;ABP=97.1567;AC=2;AF=0.166667;AN=12;AO=50;CIGAR=1X2M1X;DP=222;DPB=222;DPRA=0;EPP=111.584;EPPR=161.528;GTI=0;LEN=1;MEANALT=2.4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.38;PAIREDR=0.684932;PAO=0;PQA=0;PQR=0;PRO=0;QA=1985;QR=2899;RO=73;RPL=0;RPP=111.584;RPPR=161.528;RPR=50;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=73;SRP=161.528;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:33:9,1,23:9:360:1,23:40,914:-72.5323,-71.9463,-101.301,0,-26.36,-22.7314 0|0:57:13,11,32:13:516:11,32:431,1248:-98.6602,-67.1299,-106.3,0,-7.04271,-32.8557 0|0:31:22,0,9:22:868:0,9:0,353:-22.7925,-29.4152,-100.832,0,-71.8092,-69.0999 0|0:30:11,3,16:11:435:3,16:121,635:-48.9504,-42.2865,-77.1814,0,-25.8165,-30.9759 0|1:19:5,10,4:5:203:10,4:403,160:-31.7146,0,-13.7354,-20.0408,-3.5686,-35.5801 1|0:52:13,25,13:13:517:25,13:990,520:-77.8496,-0.271484,-35.3196,-38.9234,0,-77.5795 dDocent_Contig_7454 26 . C T 2138.15 . AB=0.364865;ABP=38.2234;AC=3;AF=0.25;AN=12;AO=81;CIGAR=1X3M1X;DP=245;DPB=245;DPRA=2.775;EPP=178.9;EPPR=307.016;GTI=0;LEN=1;MEANALT=2.75;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.950617;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2988;QR=5422;RO=140;RPL=0;RPP=178.9;RPPR=307.016;RPR=81;RUN=1;SAF=81;SAP=178.9;SAR=0;SRF=140;SRP=307.016;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:75:30,39,5,0:30:1183:39,5,0:1435,203,0:-108.293,0,-85.6095,-100.577,-80.6049,-196.418,-117.324,-97.3497,-197.923,-214.667 0|0:38:33,2,3,0:33:1286:2,3,0:73,121,0:-0.0628801,-4.04766,-109.13,0,-99.757,-104.817,-9.99687,-109.732,-105.72,-115.695 0|1:45:26,14,4,0:26:989:14,4,0:530,161,0:-35.604,0,-76.8667,-30.1574,-67.8097,-110.054,-43.4308,-81.0811,-111.258,-124.529 0|1:64:32,26,5,0:32:1218:26,5,0:950,198,0:-67.963,0,-92.0563,-61.2951,-83.5848,-159.692,-77.596,-99.8831,-161.197,-177.495 0|0:3:0,0,1,2:0:0:0,1,2:0,40,68:-9.17034,-9.17034,-9.17034,-5.85536,-5.85536,-5.55433,-3.69465,-3.69465,0,-3.09259 0|0:20:19,0,0,1:19:746:0,0,1:0,0,37:0,-5.71957,-67.0967,-5.71957,-67.0967,-67.0967,-2.32277,-64.0708,-64.0708,-63.7698 dDocent_Contig_7457 8 . T G 71.6341 . AB=0.140351;ABP=67.0497;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=245;DPB=245;DPRA=0.606383;EPP=20.3821;EPPR=517.649;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=298;QR=9102;RO=237;RPL=0;RPP=20.3821;RPPR=517.649;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=237;SRP=517.649;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:47:47,0:47:1799:0:0:0,-14.1484,-162.164 0/1:30:26,4:26:992:4:156:-5.38639,0,-80.56 0/0:6:6,0:6:232:0:0:0,-1.80618,-21.2489 0/0:73:73,0:73:2811:0:0:0,-21.9752,-253.169 0/1:27:23,4:23:888:4:142:-4.99876,0,-72.1109 0/0:62:62,0:62:2380:0:0:0,-18.6639,-214.411 dDocent_Contig_7458 11 . G A 143.125 . AB=0.285714;ABP=11.386;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=96;DPB=96;DPRA=1.4;EPP=16.0391;EPPR=73.366;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=52.3556;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.8;PAO=0;PQA=0;PQR=0;PRO=0;QA=242;QR=3526;RO=90;RPL=0;RPP=16.0391;RPPR=198.443;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=72;SRP=73.366;SRR=18;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:3:3,0:3:112:0:0:0,-0.90309,-8.94339 0/0:18:18,0:18:675:0:0:0,-5.41854,-48.5761 0/0:10:10,0:10:402:0:0:0,-3.0103,-36.5367 0/0:16:16,0:16:627:0:0:0,-4.81648,-51.1886 0/1:21:15,6:15:602:6:242:-15.8353,0,-48.195 0/0:28:28,0:28:1108:0:0:0,-8.42884,-97.0104 dDocent_Contig_7459 31 . G A 6245.23 . AB=0.447791;ABP=14.8008;AC=6;AF=0.5;AN=12;AO=223;CIGAR=1X;DP=498;DPB=498;DPRA=0;EPP=487.249;EPPR=600.165;GTI=0;LEN=1;MEANALT=1;MQM=52.6413;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.542601;PAIREDR=0.454545;PAO=0;PQA=0;PQR=0;PRO=0;QA=8869;QR=10932;RO=275;RPL=0;RPP=487.249;RPPR=600.165;RPR=223;RUN=1;SAF=223;SAP=487.249;SAR=0;SRF=275;SRP=600.165;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:43:22,21:22:875:21:837:-61.1898,0,-66.1084 0/1:111:66,45:66:2609:45:1810:-126.691,0,-201.536 0/1:73:45,28:45:1789:28:1087:-75.2376,0,-139.249 0/1:95:52,43:52:2060:43:1709:-122.898,0,-156.997 0/1:77:40,37:40:1608:37:1477:-107.07,0,-121.772 0/1:99:50,49:50:1991:49:1949:-142.659,0,-149.58 dDocent_Contig_7460 62 . A G 2646.11 . AB=0.648;ABP=26.7923;AC=3;AF=0.25;AN=12;AO=82;CIGAR=1X6M;DP=1002;DPB=1002;DPRA=0.567957;EPP=181.071;EPPR=1879.16;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3081;QR=29089;RO=864;RPL=82;RPP=181.071;RPPR=1879.16;RPR=0;RUN=1;SAF=82;SAP=181.071;SAR=0;SRF=864;SRP=1879.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:203:199,0,0:199:6574:0,0:0,0:0,-59.905,-591.731,-59.905,-591.731,-591.731 0|1:189:160,28,0:160:5284:28,0:976,0:-31.4186,0,-419.02,-79.5833,-427.449,-506.824 0|0:236:218,16,0:218:7456:16,0:579,0:0,-18.1936,-618.68,-65.6245,-623.497,-670.763 0|0:249:247,0,1:247:8391:0,1:0,31:0,-74.3544,-754.904,-71.8909,-752.416,-752.115 0|1:85:20,0,61:20:670:0,61:0,2269:-179.843,-185.864,-240.118,0,-54.3682,-36.0054 0|1:40:20,0,20:20:714:0,20:0,781:-58.5711,-64.5917,-122.784,0,-58.5657,-52.5451 dDocent_Contig_7461 10 . A G 869.616 . AB=0.018226;ABP=1662.22;AC=0;AF=0;AN=12;AO=17;CIGAR=1X1M1X;DP=1313;DPB=1313;DPRA=0.80613;EPP=39.9253;EPPR=2478.61;GTI=0;LEN=1;MEANALT=3.6;MQM=60;MQMR=59.3253;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0.762976;PAO=0;PQA=0;PQR=0;PRO=0;QA=666;QR=45588;RO=1156;RPL=0;RPP=39.9253;RPPR=2513.23;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=1152;SRP=2478.61;SRR=4;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:164:131,2,10,17:131:5148:2,10,17:80,403,678:-15.1758,-48.0197,-470.826,-21.3868,-438.21,-441.79,0,-416.821,-390.193,-418.293 0|0:228:193,1,0,32:193:7603:1,0,32:40,0,1289:-46.1504,-100.954,-725.753,-104.249,-726.054,-729.35,0,-621.807,-625.102,-615.469 0|0:180:150,9,1,19:150:5938:9,1,19:352,40,707:-12.6523,-28.8658,-514.851,-54.5109,-514.265,-542.899,0,-459.749,-485.388,-482.963 0|0:251:214,3,8,26:214:8419:3,8,26:120,323,1033:-20.205,-74.7402,-766.305,-57.9972,-740.581,-748.058,0,-682.577,-665.835,-684.635 0|0:261:247,0,0,13:247:9743:0,0,13:0,0,520:0,-74.3544,-870.013,-74.3544,-870.013,-870.013,-32.1239,-827.777,-827.777,-823.864 0|0:229:221,2,0,4:221:8737:2,0,4:74,0,162:0,-60.4838,-774.404,-66.5276,-775.006,-781.058,-53.31,-761.793,-767.845,-766.641 dDocent_Contig_7462 14 . A G 2346.32 . AB=0.453039;ABP=6.47746;AC=4;AF=0.333333;AN=12;AO=83;CIGAR=1X;DP=230;DPB=230;DPRA=3.08571;EPP=183.243;EPPR=320.045;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.433735;PAIREDR=0.438356;PAO=0;PQA=0;PQR=0;PRO=0;QA=3320;QR=5862;RO=146;RPL=0;RPP=183.243;RPPR=320.045;RPR=83;RUN=1;SAF=83;SAP=183.243;SAR=0;SRF=146;SRP=320.045;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:34,1:34:1367:1:41:0,-6.44148,-119.194 0/1:63:51,11:51:2035:11:445:-21.4149,0,-164.355 0/0:14:14,0:14:567:0:0:0,-4.21442,-51.3725 0/1:34:23,11:23:925:11:437:-29.4495,0,-73.3155 0/1:35:10,25:10:407:25:1014:-81.0161,0,-26.4545 0/1:49:14,35:14:561:35:1383:-109.973,0,-36.0799 dDocent_Contig_7463 16 . G A 177.607 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1X;DP=367;DPB=367;DPRA=2.9913;EPP=52.9542;EPPR=749.997;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=850;QR=13076;RO=344;RPL=0;RPP=52.9542;RPPR=749.997;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=344;SRP=749.997;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:883:0:0:0,-6.92369,-79.7905 0/0:84:80,4:80:3017:4:149:0,-11.5149,-257.929 0/0:64:59,5:59:2247:5:194:0,-1.43448,-184.619 0/0:87:81,6:81:3047:6:224:0,-5.67104,-253.878 1/1:5:0,5:0:0:5:188:-17.2835,-1.50515,0 0/0:104:101,3:101:3882:3:95:0,-22.4427,-340.611 dDocent_Contig_7464 29 . C T 201.377 . AB=0.212121;ABP=50.5195;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=339;DPB=339;DPRA=0.926136;EPP=13.8677;EPPR=56.9295;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.4;PAIREDR=0.529781;PAO=0;PQA=0;PQR=0;PRO=0;QA=679;QR=11998;RO=319;RPL=0;RPP=46.4397;RPPR=695.71;RPR=20;RUN=1;SAF=15;SAP=13.8677;SAR=5;SRF=204;SRP=56.9295;SRR=115;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:34,3:34:1277:3:109:0,-0.970609,-105.039 0/0:60:57,3:57:2158:3:112:0,-7.61531,-183.982 0/0:44:44,0:44:1615:0:0:0,-13.2453,-145.596 0/0:67:67,0:67:2484:0:0:0,-20.169,-223.721 0/1:66:52,14:52:1970:14:458:-21.6605,0,-157.656 0/0:65:65,0:65:2494:0:0:0,-19.5669,-224.638 dDocent_Contig_7465 39 . T A 93.1775 . AB=0.125;ABP=90.9549;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=184;DPB=184;DPRA=1.28571;EPP=22.5536;EPPR=383.018;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.777778;PAIREDR=0.828571;PAO=0;PQA=0;PQR=0;PRO=0;QA=353;QR=6885;RO=175;RPL=0;RPP=22.5536;RPPR=383.018;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=175;SRP=383.018;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:580:0:0:0,-4.51545,-52.5377 0/0:17:17,0:17:691:0:0:0,-5.11751,-62.5186 0/0:42:42,0:42:1644:0:0:0,-12.6433,-148.187 0/0:38:38,0:38:1508:0:0:0,-11.4391,-135.964 0/1:22:17,5:17:687:5:190:-10.8399,0,-55.5371 0/1:50:46,4:46:1775:4:163:-0.00692765,0,-144.92 dDocent_Contig_7466 21 . T C 121.681 . AB=0.113636;ABP=174.162;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=477;DPB=477;DPRA=0.793233;EPP=37.7539;EPPR=1004.06;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0.605206;PAO=0;PQA=0;PQR=0;PRO=0;QA=645;QR=18549;RO=461;RPL=0;RPP=37.7539;RPPR=1004.06;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=461;SRP=1004.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:78:68,10:68:2736:10:400:-12.8787,0,-222.868 0/0:79:78,1:78:3112:1:41:0,-19.6868,-276.063 0/1:54:49,5:49:1987:5:204:-2.48841,0,-162.757 0/0:100:100,0:100:4022:0:0:0,-30.103,-361.95 0/0:75:75,0:75:3037:0:0:0,-22.5772,-273.392 0/0:91:91,0:91:3655:0:0:0,-27.3937,-328.963 dDocent_Contig_7467 7 . T A 8518.77 . AB=0.0347826;ABP=435.379;AC=0;AF=0;AN=12;AO=8;CIGAR=1X3M1X1M1D2M;DP=732;DPB=718.333;DPRA=0;EPP=20.3821;EPPR=441.648;GTI=0;LEN=1;MEANALT=9;MQM=58;MQMR=60;NS=6;NUMALT=6;ODDS=0;PAIRED=0.75;PAIREDR=0.985149;PAO=0;PQA=0;PQR=0;PRO=0;QA=297;QR=7754;RO=202;RPL=0;RPP=20.3821;RPPR=441.648;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=202;SRP=441.648;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:120:37,1,6,3,9,14,43:37:1405:1,6,3,9,14,43:39,221,114,347,537,1692:-128.045,-135.977,-250.888,-121.116,-233.121,-234.521,-129.835,-241.84,-226.978,-244.143,-110.689,-222.695,-207.833,-216.552,-223.192,-95.1104,-207.116,-192.254,-200.973,-181.828,-206.108,0,-112.011,-97.1486,-105.868,-86.7217,-71.1422,-102.272 0|0:110:26,8,2,6,13,19,35:26:1010:8,2,6,13,19,35:307,76,232,507,736,1388:-106.426,-89.0537,-169.639,-108.045,-165.84,-190.437,-95.1985,-152.993,-171.985,-176.386,-72.5775,-130.372,-149.364,-136.517,-151.658,-54.316,-112.11,-131.102,-118.255,-95.6341,-131.589,0,-57.7958,-76.7878,-63.9407,-41.3192,-23.0575,-72.459 0|0:134:26,0,0,11,1,21,70:26:998:0,0,11,1,21,70:0,0,427,40,806,2818:-224.432,-232.258,-314.172,-232.258,-314.172,-314.172,-197.176,-279.089,-279.089,-275.778,-228.963,-310.877,-310.877,-275.794,-310.576,-166.11,-248.022,-248.022,-212.939,-244.727,-241.7,0,-81.9162,-81.9162,-46.832,-78.6209,-15.7642,-60.8441 0|0:117:31,3,0,12,13,19,36:31:1194:3,0,12,13,19,36:114,0,456,507,739,1412:-106.773,-106.756,-203.889,-116.105,-204.792,-214.141,-78.7137,-167.4,-176.749,-173.137,-74.4307,-163.118,-172.467,-135.075,-168.553,-55.376,-144.063,-153.412,-116.02,-111.738,-147.692,0,-88.6874,-98.0363,-60.645,-56.3619,-37.3068,-87.1992 0|0:141:34,0,0,3,11,11,73:34:1284:0,0,3,11,11,73:0,0,115,419,422,2907:-229.135,-239.37,-344.601,-239.37,-344.601,-344.601,-229.932,-335.163,-335.163,-334.26,-205.007,-310.237,-310.237,-300.799,-306.926,-204.738,-309.968,-309.968,-300.53,-275.605,-306.657,0,-105.231,-105.231,-95.7924,-70.8662,-70.5972,-83.2557 0|0:110:48,0,0,6,21,7,25:48:1863:0,0,6,21,7,25:0,0,229,798,267,1004:-68.2879,-82.7374,-235.811,-82.7374,-235.811,-235.811,-63.9523,-217.025,-217.025,-215.219,-17.3037,-170.374,-170.374,-151.589,-164.052,-60.8358,-213.909,-213.909,-195.123,-148.472,-211.801,0,-153.077,-153.077,-134.292,-87.6405,-131.175,-145.552 dDocent_Contig_7468 82 . T A 97.4181 . AB=0.177778;ABP=43.5927;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=254;DPB=254;DPRA=1.07656;EPP=20.3821;EPPR=537.193;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.670732;PAO=0;PQA=0;PQR=0;PRO=0;QA=272;QR=8156;RO=246;RPL=4;RPP=3.0103;RPPR=7.28263;RPR=4;RUN=1;SAF=4;SAP=3.0103;SAR=4;SRF=134;SRP=7.28263;SRR=112;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:34,0:34:1116:0:0:0,-10.235,-100.736 0/1:45:37,8:37:1186:8:272:-11.2647,0,-93.4819 0/0:35:35,0:35:1159:0:0:0,-10.536,-104.607 0/0:51:51,0:51:1695:0:0:0,-15.3525,-152.832 0/0:24:24,0:24:818:0:0:0,-7.22472,-73.9339 0/0:65:65,0:65:2182:0:0:0,-19.5669,-196.649 dDocent_Contig_7469 52 . G A 2446.7 . AB=0.0735294;ABP=110.434;AC=0;AF=0;AN=12;AO=5;CIGAR=1M1I11M1X3M;DP=451;DPB=469.375;DPRA=0;EPP=13.8677;EPPR=502.449;GTI=0;LEN=1;MEANALT=7;MQM=60;MQMR=60;NS=6;NUMALT=6;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=134;QR=8599;RO=230;RPL=0;RPP=13.8677;RPPR=502.449;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=230;SRP=502.449;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:77:44,0,1,14,0,0,18:44:1656:0,1,14,0,0,18:0,41,516,0,0,692:-43.5596,-56.8049,-192.493,-53.4198,-189.109,-188.808,-14.6243,-150.308,-146.923,-146.093,-56.8049,-192.493,-189.109,-150.308,-192.493,-56.8049,-192.493,-189.109,-150.308,-192.493,-192.493,0,-135.693,-132.309,-93.5077,-135.693,-135.693,-130.275 0|0:88:48,0,4,13,1,7,10:48:1817:0,4,13,1,7,10:0,116,513,41,263,397:-27.7837,-42.2332,-191.211,-33.0105,-181.986,-180.782,0,-148.997,-139.772,-145.083,-38.8474,-187.827,-178.602,-145.612,-187.526,-20.684,-169.668,-160.443,-127.452,-166.283,-167.561,-9.53372,-158.525,-149.3,-116.309,-155.14,-136.981,-155.515 0|0:105:46,0,2,11,10,7,22:46:1729:0,2,11,10,7,22:0,77,436,397,272,872:-57.933,-71.7804,-213.428,-65.4579,-207.105,-206.503,-35.8924,-177.541,-171.218,-174.229,-39.0972,-180.745,-174.423,-144.858,-177.735,-49.4309,-191.078,-184.756,-155.191,-158.396,-188.971,0,-141.651,-135.328,-105.762,-108.967,-119.301,-135.028 0|0:74:39,0,2,23,1,0,7:39:1481:0,2,23,1,0,7:0,80,894,40,0,280:-61.7433,-73.4835,-194.934,-66.8919,-188.343,-187.741,0,-121.47,-114.879,-114.547,-70.1877,-191.639,-185.048,-118.175,-191.338,-73.4835,-194.934,-188.343,-121.47,-191.639,-194.934,-50.4125,-171.867,-165.276,-98.401,-168.571,-171.867,-169.76 0|0:39:14,0,11,5,8,0,0:14:516:0,11,5,8,0,0:0,431,183,311,0,0:-31.2419,-35.4563,-77.6464,0,-42.197,-38.8857,-20.5068,-62.696,-27.2452,-61.1909,-9.89536,-52.0885,-16.6333,-37.1374,-49.6802,-35.4563,-77.6464,-42.197,-62.696,-52.0885,-77.6464,-35.4563,-77.6464,-42.197,-62.696,-52.0885,-77.6464,-77.6464 0|0:68:39,5,14,1,0,5,0:39:1400:5,14,1,0,5,0:134,551,29,0,188,0:-33.6306,-34.8353,-147.515,0,-103.686,-110.015,-43.064,-146.712,-111.922,-156.956,-45.3708,-149.02,-114.23,-157.257,-159.564,-29.9634,-133.618,-98.8255,-141.854,-144.162,-142.657,-45.3708,-149.02,-114.23,-157.257,-159.564,-144.162,-159.564 dDocent_Contig_7470 16 . A T 4965.54 . AB=0.269333;ABP=349.624;AC=4;AF=0.333333;AN=12;AO=214;CIGAR=1X;DP=1026;DPB=1026;DPRA=0;EPP=467.705;EPPR=1766.25;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8569;QR=32552;RO=812;RPL=0;RPP=467.705;RPPR=1766.25;RPR=214;RUN=1;SAF=214;SAP=467.705;SAR=0;SRF=812;SRP=1766.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:111:110,1:110:4412:1:36:0,-29.8161,-393.416 0/0:165:154,11:154:6175:11:435:0,-10.1707,-516.004 0/1:76:58,18:58:2331:18:722:-42.4262,0,-187.055 0/1:150:130,20:130:5178:20:812:-28.241,0,-420.724 0/1:285:227,58:227:9124:58:2305:-121.806,0,-734.791 0/1:239:133,106:133:5332:106:4259:-311.303,0,-407.774 dDocent_Contig_7471 14 . T A 1529.72 . AB=0.137097;ABP=144.856;AC=6;AF=0.5;AN=12;AO=17;CIGAR=1M1I3X;DP=182;DPB=201;DPRA=0;EPP=39.9253;EPPR=233.186;GTI=0;LEN=1;MEANALT=2;MQM=59.4118;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.529412;PAIREDR=0.575472;PAO=0;PQA=0;PQR=0;PRO=0;QA=668;QR=4150;RO=106;RPL=0;RPP=39.9253;RPPR=233.186;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=106;SRP=233.186;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:19:16,3,0:16:623:3,0:113,0:-4.80776,0,-50.6856,-9.62424,-51.5887,-60.8349 0|1:43:17,22,4:17:675:22,4:856,154:-64.4914,0,-48.9573,-56.9698,-42.9431,-111.341 0|1:31:19,10,2:19:747:10,2:391,80:-26.4101,0,-58.4273,-25.538,-54.8468,-86.3812 0|1:23:13,5,5:13:498:5,5:194,199:-12.4778,-0.456858,-39.8056,0,-24.9204,-39.3559 0|1:27:17,4,6:17:670:4,6:157,235:-14.2008,-6.40541,-60.3242,0,-42.2101,-53.3161 0|1:39:24,15,0:24:937:15,0:591,0:-41.7809,0,-72.8996,-49.0056,-77.4151,-126.028 dDocent_Contig_7472 18 . C T 163.735 . AB=0.205128;ABP=32.4644;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=395;DPB=395;DPRA=0.740088;EPP=31.2394;EPPR=830.341;GTI=0;LEN=1;MEANALT=1.33333;MQM=57.3077;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.153846;PAIREDR=0.493438;PAO=0;PQA=0;PQR=0;PRO=0;QA=521;QR=15317;RO=381;RPL=0;RPP=31.2394;RPPR=830.341;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=381;SRP=830.341;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:53,1:53:2141:1:36:0,-12.6642,-189.268 0/0:75:70,4:70:2797:4:159:0,-7.90365,-237.17 0/1:39:31,8:31:1250:8:326:-17.8964,0,-101.022 0/0:64:64,0:64:2555:0:0:0,-19.2659,-230.081 0/0:72:72,0:72:2920:0:0:0,-21.6742,-262.883 0/0:91:91,0:91:3654:0:0:0,-27.3937,-328.874 dDocent_Contig_7473 81 . T C 36.1857 . AB=0.122807;ABP=73.4498;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=316;DPB=316;DPRA=1.37968;EPP=24.725;EPPR=667.481;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.526144;PAO=0;PQA=0;PQR=0;PRO=0;QA=349;QR=10730;RO=306;RPL=10;RPP=24.725;RPPR=667.481;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=306;SRP=667.481;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:36,0:36:1241:0:0:0,-10.8371,-111.988 0/0:72:69,3:69:2438:3:105:0,-11.878,-209.879 0/1:57:50,7:50:1723:7:244:-5.14135,0,-138.189 0/0:54:54,0:54:1909:0:0:0,-16.2556,-172.088 0/0:36:36,0:36:1259:0:0:0,-10.8371,-113.611 0/0:61:61,0:61:2160:0:0:0,-18.3628,-194.668 dDocent_Contig_7474 15 . C A 2512.83 . AB=0.206485;ABP=441.514;AC=4;AF=0.333333;AN=12;AO=141;CIGAR=1M2D2X;DP=902;DPB=845.6;DPRA=0;EPP=309.188;EPPR=1640.3;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5606;QR=29558;RO=754;RPL=0;RPP=309.188;RPPR=1640.3;RPR=141;RUN=1;SAF=141;SAP=309.188;SAR=0;SRF=754;SRP=1640.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:124:114,10:114:4442:10:397:0,-1.24135,-363.689 0|1:146:124,22:124:4850:22:881:-35.6479,0,-392.503 0|1:134:88,46:88:3426:46:1838:-125.295,0,-268.093 0|1:173:136,36:136:5381:36:1414:-75.5291,0,-432.203 0|0:192:180,10:180:7058:10:399:0,-21.3334,-598.708 0|1:133:112,17:112:4401:17:677:-22.0329,0,-356.854 dDocent_Contig_7475 11 . A C 3627.04 . AB=0.0769231;ABP=83.8559;AC=0;AF=0;AN=12;AO=4;CIGAR=4M3I2M1X;DP=401;DPB=490.143;DPRA=0;EPP=11.6962;EPPR=419.933;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.770833;PAO=0;PQA=0;PQR=0;PRO=0;QA=153;QR=7385;RO=192;RPL=0;RPP=11.6962;RPPR=419.933;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=192;SRP=419.933;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:52:13,33,4,1:13:495:33,4,1:1280,153,36:-101.261,0,-30.6694,-92.6212,-28.0488,-132.018,-102.238,-37.6671,-130.285,-142.538 0|0:55:25,17,0,10:25:964:17,0,10:647,0,384:-45.5374,0,-74.0467,-53.0632,-79.1642,-132.228,-21.54,-47.6423,-100.706,-97.6955 0|0:37:17,17,0,3:17:657:17,0,3:658,0,114:-48.9412,0,-48.8513,-54.0587,-53.9688,-108.022,-44.7106,-44.6206,-98.6737,-97.7706 0|0:104:54,31,0,18:54:2063:31,0,18:1186,0,656:-81.0774,0,-159.949,-97.333,-169.281,-266.605,-43.7568,-115.702,-213.025,-207.607 0|0:65:30,16,0,18:30:1153:16,0,18:612,0,627:-41.9216,-0.720595,-90.5793,-50.9525,-95.3958,-145.616,0,-44.4386,-94.6553,-89.2368 0|0:88:53,10,0,23:53:2053:10,0,23:390,0,868:-55.1731,-39.0656,-204.721,-71.1277,-207.731,-239.791,0,-136.598,-168.657,-161.734 dDocent_Contig_7479 115 . C T 45.4538 . AB=0.147059;ABP=39.7976;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=215;DPB=215;DPRA=1.75455;EPP=35.5824;EPPR=437.305;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.79;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.42;PAO=0;PQA=0;PQR=0;PRO=0;QA=523;QR=6739;RO=200;RPL=0;RPP=35.5824;RPPR=437.305;RPR=15;RUN=1;SAF=0;SAP=35.5824;SAR=15;SRF=0;SRP=437.305;SRR=200;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:29,5:29:975:5:174:-5.76693,0,-76.2774 0/0:65:59,6:59:1976:6:209:0,-0.415897,-158.962 0/0:32:30,2:30:1001:2:70:0,-2.98556,-83.7464 0/0:34:33,1:33:1149:1:35:0,-6.73639,-100.22 0/0:28:27,1:27:900:1:35:0,-4.93021,-77.8061 0/0:22:22,0:22:738:0:0:0,-6.62266,-66.7323 dDocent_Contig_7480 16 . G A 727.778 . AB=0.181435;ABP=211.921;AC=3;AF=0.25;AN=12;AO=43;CIGAR=1X;DP=350;DPB=350;DPRA=2.09735;EPP=96.3836;EPPR=669.652;GTI=0;LEN=1;MEANALT=1;MQM=51.5581;MQMR=59.9805;NS=6;NUMALT=1;ODDS=0;PAIRED=0.209302;PAIREDR=0.95114;PAO=0;PQA=0;PQR=0;PRO=0;QA=1673;QR=12031;RO=307;RPL=0;RPP=96.3836;RPPR=669.652;RPR=43;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=307;SRP=669.652;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:49,5:49:1935:5:203:-2.30701,0,-158.085 0/1:87:64,23:64:2505:23:916:-55.3287,0,-199.417 0/0:49:49,0:49:1910:0:0:0,-14.7505,-172.116 0/1:96:81,15:81:3158:15:554:-20.3296,0,-255.401 0/0:31:31,0:31:1217:0:0:0,-9.33193,-109.805 0/0:33:33,0:33:1306:0:0:0,-9.93399,-117.808 dDocent_Contig_7481 7 . T A 1374.65 . AB=0.0655738;ABP=1002.96;AC=0;AF=0;AN=12;AO=40;CIGAR=1X2M1X3M1X;DP=839;DPB=839;DPRA=0;EPP=89.8692;EPPR=1028.26;GTI=0;LEN=1;MEANALT=8.5;MQM=55.45;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=1;PAIREDR=0.914676;PAO=0;PQA=0;PQR=0;PRO=0;QA=1555;QR=22644;RO=586;RPL=0;RPP=89.8692;RPPR=1275.49;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=556;SRP=1028.26;SRR=30;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:128:85,13,5,1,2,18:85:3316:13,5,1,2,18:511,185,36,81,727:-34.3728,-22.9748,-291.652,-51.6913,-287.284,-322.766,-57.023,-292.628,-321.334,-329.314,-53.2791,-288.885,-317.592,-322.936,-325.271,0,-235.631,-264.338,-269.681,-265.938,-267.2 0|0:140:104,8,6,11,1,6:104:4052:8,6,11,1,6:314,241,438,41,243:-4.7594,-10.2639,-340.881,-16.7612,-323.983,-347.981,0,-307.223,-313.72,-329.716,-32.6821,-339.905,-346.403,-329.643,-365.408,-16.0275,-323.251,-329.749,-312.989,-345.671,-347.249 0|0:176:101,10,9,14,5,31:101:3888:10,9,14,5,31:383,362,559,194,1247:-72.3801,-71.5154,-387.713,-84.5853,-372.515,-401.074,-56.7393,-344.682,-357.742,-371.736,-86.846,-374.786,-387.846,-360.012,-404.548,0,-287.953,-301.014,-273.179,-303.283,-309.889 0|0:166:108,9,15,5,5,18:108:4156:9,15,5,5,18:347,593,195,204,727:-27.4274,-31.4773,-369.969,-14.6437,-327.378,-351.325,-43.9106,-356.65,-339.812,-383.607,-43.1055,-355.846,-339.008,-368.28,-382.803,0,-312.744,-295.906,-325.178,-324.374,-335.788 0|0:105:92,0,0,11,0,0:92:3532:0,0,11,0,0:0,0,431,0,0:-7.74561,-35.4404,-325.345,-35.4404,-325.345,-325.345,0,-289.906,-289.906,-286.594,-35.4404,-325.345,-325.345,-289.906,-325.345,-35.4404,-325.345,-325.345,-289.906,-325.345,-325.345 0|0:124:96,0,5,9,7,1:96:3700:0,5,9,7,1:0,199,356,284,40:-0.411411,-29.3103,-333.133,-19.4819,-323.284,-321.779,0,-303.834,-293.986,-301.125,-5.87685,-309.71,-299.862,-280.411,-307.603,-26.0141,-329.838,-319.989,-300.539,-306.415,-329.537 dDocent_Contig_7482 13 . A T 129.557 . AB=0.25;ABP=16.0391;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=220;DPB=220;DPRA=0.933333;EPP=18.2106;EPPR=465.534;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=275;QR=8430;RO=213;RPL=0;RPP=18.2106;RPPR=465.534;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=213;SRP=465.534;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1111:0:0:0,-8.42884,-100.277 0/0:46:45,1:45:1790:1:38:0,-10.0501,-157.519 0/0:18:18,0:18:709:0:0:0,-5.41854,-64.1374 0/1:24:18,6:18:721:6:237:-14.4786,0,-57.9908 0/0:59:59,0:59:2323:0:0:0,-17.7608,-209.24 0/0:45:45,0:45:1776:0:0:0,-13.5463,-160.057 dDocent_Contig_7483 34 . A C 167.055 . AB=0.125;ABP=169.128;AC=3;AF=0.25;AN=12;AO=28;CIGAR=1X;DP=318;DPB=318;DPRA=0;EPP=63.8115;EPPR=632.737;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=58.9379;NS=6;NUMALT=1;ODDS=0;PAIRED=0.964286;PAIREDR=0.972414;PAO=0;PQA=0;PQR=0;PRO=0;QA=1126;QR=11425;RO=290;RPL=0;RPP=63.8115;RPPR=632.737;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=290;SRP=632.737;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:56:51,5:51:1971:5:201:-1.61284,0,-152.533 0/0:75:70,5:70:2753:5:203:0,-3.92419,-229.244 0/0:43:41,2:41:1624:2:79:0,-5.44705,-138.901 0/1:50:41,9:41:1636:9:357:-17.4405,0,-132.422 0/0:64:60,4:60:2386:4:163:0,-4.20749,-197.589 0/1:30:27,3:27:1055:3:123:-2.43389,0,-82.2313 dDocent_Contig_7484 89 . C T 313.789 . AB=0.169014;ABP=138.131;AC=3;AF=0.25;AN=12;AO=27;CIGAR=1X;DP=708;DPB=708;DPRA=0.529897;EPP=61.6401;EPPR=1477.44;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995582;PAO=0;PQA=0;PQR=0;PRO=0;QA=951;QR=24225;RO=679;RPL=27;RPP=61.6401;RPPR=1477.44;RPR=0;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=679;SRP=1477.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:29,4:29:999:4:144:-3.37963,0,-80.2829 0/1:58:49,9:49:1714:9:320:-11.6828,0,-137.086 0/0:31:28,2:28:1013:2:74:0,-2.29494,-84.4925 0/1:51:40,11:40:1447:11:406:-21.5353,0,-115.171 0/0:341:339,1:339:12145:1:7:0,-101.725,-1092.13 0/0:194:194,0:194:6907:0:0:0,-58.3998,-621.665 dDocent_Contig_7485 51 . C A 2023.31 . AB=0.634615;ABP=19.3799;AC=2;AF=0.166667;AN=12;AO=71;CIGAR=1X;DP=343;DPB=343;DPRA=1.38194;EPP=157.185;EPPR=593.651;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2828;QR=10897;RO=272;RPL=71;RPP=157.185;RPPR=593.651;RPR=0;RUN=1;SAF=71;SAP=157.185;SAR=0;SRF=272;SRP=593.651;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:55:55,0:55:2207:0:0:0,-16.5566,-198.799 0/0:95:90,5:90:3595:5:202:0,-10.036,-305.01 0/0:36:36,0:36:1440:0:0:0,-10.8371,-129.85 0/1:46:32,14:32:1293:14:549:-35.9035,0,-102.786 0/1:58:6,52:6:236:52:2077:-169.649,0,-4.15112 0/0:53:53,0:53:2126:0:0:0,-15.9546,-191.513 dDocent_Contig_7486 185 . C T 5223.19 . AB=0.614841;ABP=35.4289;AC=6;AF=0.5;AN=12;AO=174;CIGAR=1X;DP=283;DPB=283;DPRA=0;EPP=380.846;EPPR=239.701;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.95977;PAIREDR=0.889908;PAO=0;PQA=0;PQR=0;PRO=0;QA=6856;QR=4296;RO=109;RPL=174;RPP=380.846;RPPR=239.701;RPR=0;RUN=1;SAF=0;SAP=380.846;SAR=174;SRF=0;SRP=239.701;SRR=109;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:48:11,37:11:438:37:1418:-113.417,0,-25.3242 0/1:62:26,36:26:1011:36:1435:-110.739,0,-72.6194 0/1:27:11,16:11:431:16:646:-50.346,0,-31.0118 0/1:54:30,24:30:1200:24:950:-69.5484,0,-92.0209 0/1:44:20,24:20:792:24:954:-72.9186,0,-58.3522 0/1:48:11,37:11:424:37:1453:-116.572,0,-24.0564 dDocent_Contig_7488 181 . C T 217.742 . AB=0.285714;ABP=16.9698;AC=3;AF=0.25;AN=12;AO=10;CIGAR=1X;DP=53;DPB=53;DPRA=1.94444;EPP=24.725;EPPR=96.3836;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=404;QR=1732;RO=43;RPL=10;RPP=24.725;RPPR=96.3836;RPR=0;RUN=1;SAF=0;SAP=24.725;SAR=10;SRF=0;SRP=96.3836;SRR=43;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:11:9,2:9:364:2:82:-4.46835,0,-29.8134 0/1:13:10,3:10:397:3:122:-7.4591,0,-32.1749 0/0:8:8,0:8:324:0:0:0,-2.40824,-29.5288 0/0:8:8,0:8:321:0:0:0,-2.40824,-29.257 0/1:11:6,5:6:245:5:200:-15.0682,0,-19.1181 0/0:2:2,0:2:81:0:0:0,-0.60206,-7.68573 dDocent_Contig_7489 78 . T A 178.072 . AB=0;ABP=0;AC=4;AF=0.666667;AN=6;AO=7;CIGAR=1X;DP=8;DPB=8;DPRA=3.5;EPP=18.2106;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=30.2857;MQMR=40;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=262;QR=30;RO=1;RPL=5;RPP=5.80219;RPPR=5.18177;RPR=2;RUN=1;SAF=5;SAP=5.80219;SAR=2;SRF=1;SRP=5.18177;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 0/0:1:1,0:1:30:0:0:0,-0.30103,-2.95865 1/1:5:0,5:0:0:5:193:-11.0543,-1.50515,0 1/1:2:0,2:0:0:2:69:-6.27453,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_7491 35 . C T 554.453 . AB=0.255102;ABP=54.0621;AC=2;AF=0.166667;AN=12;AO=27;CIGAR=1X;DP=275;DPB=275;DPRA=0.785047;EPP=61.6401;EPPR=541.535;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.979839;PAO=0;PQA=0;PQR=0;PRO=0;QA=1049;QR=9920;RO=248;RPL=0;RPP=61.6401;RPPR=541.535;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=248;SRP=541.535;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:25,1:25:1005:1:41:0,-3.73221,-86.651 0/0:44:43,1:43:1745:1:36:0,-9.64704,-153.663 0/0:64:64,0:64:2546:0:0:0,-19.2659,-229.263 0/0:43:43,0:43:1717:0:0:0,-12.9443,-154.753 0/1:75:61,14:61:2419:14:541:-26.4485,0,-195.283 0/1:23:12,11:12:488:11:431:-32.2187,0,-37.3472 dDocent_Contig_7492 15 . T A 28472.3 . AB=0.0416069;ABP=1275.12;AC=0;AF=0;AN=12;AO=37;CIGAR=1X1M1X2M;DP=1077;DPB=1077;DPRA=0;EPP=83.3548;EPPR=261.416;GTI=0;LEN=1;MEANALT=3.4;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1458;QR=4633;RO=119;RPL=0;RPP=83.3548;RPPR=261.416;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=119;SRP=261.416;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:153:32,0,10,110:32:1236:0,10,110:0,388,4324:-346.027,-355.66,-457.166,-323.833,-425.338,-422.328,0,-101.525,-69.6957,-68.412 0|0:231:22,4,7,198:22:849:4,7,198:159,284,7771:-632.391,-625.922,-694.437,-615.591,-672.219,-683.203,0,-56.6167,-46.2831,-10.1045 0|0:135:25,4,9,97:25:992:4,9,97:159,353,3839:-308.408,-302.843,-383.301,-286.905,-355.477,-365.858,0,-68.5736,-52.6364,-52.4646 0|0:184:24,14,9,136:24:923:14,9,136:546,351,5309:-429.154,-391.5,-463.057,-407.528,-438.42,-480.589,0,-30.8911,-46.9199,-34.8315 0|0:147:13,7,5,122:13:513:7,5,122:281,202,4877:-397.783,-378.542,-418.645,-385.042,-404.099,-425.748,0,-19.0515,-25.5522,-5.48138 0|0:227:3,8,0,212:3:120:8,0,212:313,0,8381:-742.693,-717.864,-725.341,-743.596,-727.75,-753.482,-53.9321,-38.0916,-63.8184,0 dDocent_Contig_7493 43 . T A 927.512 . AB=0.349515;ABP=23.2703;AC=5;AF=0.416667;AN=12;AO=37;CIGAR=1X;DP=130;DPB=130;DPRA=0;EPP=83.3548;EPPR=204.957;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.783784;PAIREDR=0.752688;PAO=0;PQA=0;PQR=0;PRO=0;QA=1481;QR=3700;RO=93;RPL=0;RPP=83.3548;RPPR=204.957;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=93;SRP=204.957;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:26,1:26:1014:1:41:0,-4.03324,-87.4496 0/1:18:15,3:15:604:3:122:-5.95395,0,-49.2786 0/1:12:11,1:11:437:1:41:-0.482207,0,-36.0708 0/1:25:12,13:12:484:13:516:-39.2562,0,-36.3857 0/1:26:18,8:18:730:8:326:-21.8831,0,-58.1977 0/1:22:11,11:11:431:11:435:-32.8777,0,-32.5173 dDocent_Contig_7495 17 . C T 1610.76 . AB=0.1875;ABP=30.1537;AC=0;AF=0;AN=12;AO=6;CIGAR=2X4M;DP=122;DPB=122;DPRA=0;EPP=16.0391;EPPR=120.27;GTI=0;LEN=1;MEANALT=2;MQM=12;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=72;QR=2144;RO=54;RPL=0;RPP=16.0391;RPPR=120.27;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=54;SRP=120.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:8:2,6,0:2:81:6,0:238,0:-19.3854,0,-5.27749,-19.9875,-7.08367,-26.6687 0|0:27:8,19,0:8:319:19,0:763,0:-59.2073,0,-20.9491,-61.6156,-26.6687,-87.888 0|0:21:13,7,0:13:514:7,0:266,0:-18.1669,0,-40.4917,-22.0803,-42.5989,-64.4126 0|0:34:14,19,0:14:562:19,0:759,0:-53.5971,0,-40.8516,-57.8115,-46.5712,-104.138 0|0:22:12,6,4:12:479:6,4:235,48:-13.9502,0,-37.8756,-15.5861,-37.6764,-53.8618 0|0:10:5,3,2:5:189:3,2:120,24:-7.99069,0,-14.7902,-8.56968,-14.734,-23.4557 dDocent_Contig_7496 17 . T A 34.248 . AB=0.122449;ABP=63.6786;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=288;DPB=288;DPRA=1.0251;EPP=16.0391;EPPR=615.366;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996454;PAO=0;PQA=0;PQR=0;PRO=0;QA=215;QR=11164;RO=282;RPL=0;RPP=16.0391;RPPR=615.366;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=282;SRP=615.366;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:985:0:0:0,-7.52575,-88.9494 0/0:39:39,0:39:1555:0:0:0,-11.7402,-140.191 0/0:72:72,0:72:2859:0:0:0,-21.6742,-257.412 0/1:49:43,6:43:1679:6:215:-4.94752,0,-136.59 0/0:58:58,0:58:2276:0:0:0,-17.4597,-205.016 0/0:45:45,0:45:1810:0:0:0,-13.5463,-163.109 dDocent_Contig_7497 38 . G A 269.505 . AB=0.158879;ABP=111.158;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=226;DPB=226;DPRA=1.79832;EPP=39.9253;EPPR=456.848;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.705882;PAIREDR=0.851675;PAO=0;PQA=0;PQR=0;PRO=0;QA=685;QR=8406;RO=209;RPL=0;RPP=39.9253;RPPR=456.848;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=209;SRP=456.848;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:980:0:0:0,-7.52575,-88.4953 0/1:58:49,9:49:1982:9:360:-15.3032,0,-161.106 0/1:49:41,8:41:1668:8:325:-14.8692,0,-135.588 0/0:40:40,0:40:1621:0:0:0,-12.0412,-146.115 0/0:24:24,0:24:965:0:0:0,-7.22472,-87.1471 0/0:30:30,0:30:1190:0:0:0,-9.0309,-107.373 dDocent_Contig_7498 36 . A G 189.346 . AB=0.118644;ABP=226.598;AC=3;AF=0.25;AN=12;AO=21;CIGAR=1X;DP=381;DPB=381;DPRA=0.867647;EPP=48.6112;EPPR=784.74;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.936111;PAO=0;PQA=0;PQR=0;PRO=0;QA=848;QR=14040;RO=360;RPL=0;RPP=48.6112;RPPR=784.74;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=360;SRP=784.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:57:48,9:48:1858:9:364:-15.9657,0,-150.284 0/0:68:68,0:68:2675:0:0:0,-20.47,-240.896 0/1:73:66,7:66:2611:7:283:-3.86731,0,-213.144 0/1:47:42,5:42:1640:5:201:-4.32211,0,-133.691 0/0:72:72,0:72:2758:0:0:0,-21.6742,-248.36 0/0:64:64,0:64:2498:0:0:0,-19.2659,-224.979 dDocent_Contig_7499 59 . G A 6432.09 . AB=0.548469;ABP=11.0093;AC=6;AF=0.5;AN=12;AO=215;CIGAR=1X;DP=392;DPB=392;DPRA=0;EPP=469.877;EPPR=387.361;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.851163;PAIREDR=0.779661;PAO=0;PQA=0;PQR=0;PRO=0;QA=8566;QR=7034;RO=177;RPL=215;RPP=469.877;RPPR=387.361;RPR=0;RUN=1;SAF=215;SAP=469.877;SAR=0;SRF=177;SRP=387.361;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:61:41,20:41:1632:20:800:-53.9545,0,-128.751 0/1:88:51,37:51:2014:37:1451:-104.34,0,-154.96 0/1:77:34,43:34:1350:43:1718:-131.658,0,-98.5733 0/1:62:28,34:28:1115:34:1367:-104.621,0,-81.9698 0/1:47:6,41:6:245:41:1627:-132.509,0,-8.28106 0/1:57:17,40:17:678:40:1603:-127.347,0,-44.1898 dDocent_Contig_7502 28 . A G 45.2353 . AB=0.136364;ABP=53.5464;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=313;DPB=313;DPRA=0.327138;EPP=16.0391;EPPR=669.652;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=225;QR=12093;RO=307;RPL=0;RPP=16.0391;RPPR=669.652;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=307;SRP=669.652;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:72:72,0:72:2852:0:0:0,-21.6742,-256.799 0/0:85:85,0:85:3350:0:0:0,-25.5875,-301.572 0/0:57:57,0:57:2263:0:0:0,-17.1587,-203.842 0/0:55:55,0:55:2113:0:0:0,-16.5566,-190.359 0/1:20:17,3:17:682:3:118:-4.98098,0,-55.691 0/1:24:21,3:21:833:3:107:-2.75168,0,-68.0608 dDocent_Contig_7503 78 . C T 4338.9 . AB=0.57868;ABP=13.6031;AC=7;AF=0.583333;AN=12;AO=148;CIGAR=1X;DP=231;DPB=231;DPRA=0;EPP=324.388;EPPR=183.243;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5562;QR=2922;RO=83;RPL=148;RPP=324.388;RPPR=183.243;RPR=0;RUN=1;SAF=148;SAP=324.388;SAR=0;SRF=83;SRP=183.243;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:9,25:9:334:25:924:-73.2318,0,-20.1745 0/1:48:16,32:16:553:32:1218:-95.4635,0,-35.6414 1/1:34:0,34:0:0:34:1289:-116.292,-10.235,0 0/1:30:6,24:6:217:24:917:-73.8152,0,-10.8503 0/1:29:19,10:19:665:10:353:-23.368,0,-51.4412 0/1:56:33,23:33:1153:23:861:-60.9409,0,-87.2023 dDocent_Contig_7504 1 . N G 103.538 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=111;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:111:-10.3532,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_7505 119 . G A 54.9401 . AB=0.229167;ABP=33.5919;AC=1;AF=0.0833333;AN=12;AO=21;CIGAR=2X;DP=245;DPB=245;DPRA=1.38462;EPP=48.6112;EPPR=450.692;GTI=0;LEN=1;MEANALT=1.75;MQM=22.2857;MQMR=41.2202;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.550459;PAO=0;PQA=0;PQR=0;PRO=0;QA=617;QR=5962;RO=218;RPL=0;RPP=48.6112;RPPR=476.391;RPR=21;RUN=1;SAF=0;SAP=48.6112;SAR=21;SRF=3;SRP=450.692;SRR=215;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:35:33,2:33:940:2:64:0,-6.10735,-67.6768 0|0:50:40,7:40:1077:7:200:0,-1.53899,-65.7359 0|0:33:32,0:32:923:0:0:0,-9.63296,-75.5688 0|1:48:36,11:36:960:11:318:-7.01686,0,-65.6865 0|0:32:31,0:31:843:0:0:0,-9.33193,-49.3937 0|0:47:46,1:46:1219:1:35:0,-12.0652,-73.849 dDocent_Contig_7506 41 . T G 2303.39 . AB=0.530612;ABP=4.20683;AC=4;AF=0.333333;AN=12;AO=78;CIGAR=1X;DP=181;DPB=181;DPRA=2.16176;EPP=172.385;EPPR=226.672;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990291;PAO=0;PQA=0;PQR=0;PRO=0;QA=3117;QR=4093;RO=103;RPL=0;RPP=172.385;RPPR=226.672;RPR=78;RUN=1;SAF=78;SAP=172.385;SAR=0;SRF=103;SRP=226.672;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:18:10,8:10:397:8:326:-24.2913,0,-30.669 0/1:44:27,17:27:1045:17:679:-48.1953,0,-81.0834 0/1:64:17,47:17:686:47:1868:-149.057,0,-42.8028 0/1:21:15,6:15:607:6:244:-16.0172,0,-48.647 0/0:28:28,0:28:1122:0:0:0,-8.42884,-101.261 0/0:6:6,0:6:236:0:0:0,-1.80618,-21.6097 dDocent_Contig_7507 31 . G A 922.984 . AB=0.306452;ABP=43.3577;AC=2;AF=0.166667;AN=12;AO=39;CIGAR=1X;DP=272;DPB=272;DPRA=1.64078;EPP=87.6977;EPPR=508.963;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1509;QR=9256;RO=233;RPL=0;RPP=87.6977;RPPR=508.963;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=233;SRP=508.963;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:871:0:0:0,-6.62266,-78.7043 0/0:45:44,1:44:1746:1:40:0,-9.55067,-153.366 0/0:45:45,0:45:1800:0:0:0,-13.5463,-162.213 0/0:36:36,0:36:1436:0:0:0,-10.8371,-129.49 0/1:71:44,27:44:1724:27:1052:-73.6005,0,-134.007 0/1:53:42,11:42:1679:11:417:-21.9197,0,-135.377 dDocent_Contig_7508 28 . C T 611.619 . AB=0.259259;ABP=57.3775;AC=2;AF=0.166667;AN=12;AO=31;CIGAR=1X;DP=356;DPB=356;DPRA=0.971074;EPP=70.3259;EPPR=708.739;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.975385;PAO=0;PQA=0;PQR=0;PRO=0;QA=1186;QR=12964;RO=325;RPL=0;RPP=70.3259;RPPR=708.739;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=325;SRP=708.739;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:62:61,1:61:2464:1:37:0,-14.966,-218.198 0/0:71:71,0:71:2834:0:0:0,-21.3731,-255.167 0/0:50:50,0:50:1988:0:0:0,-15.0515,-179.109 0/0:65:63,2:63:2474:2:80:0,-11.9754,-215.207 0/1:86:69,17:69:2755:17:642:-32.2235,0,-222.167 0/1:22:11,11:11:449:11:427:-32.1603,0,-34.1432 dDocent_Contig_7509 27 . G T 1085.44 . AB=0.190616;ABP=286.518;AC=6;AF=0.5;AN=12;AO=65;CIGAR=1X;DP=341;DPB=341;DPRA=0;EPP=144.156;EPPR=602.337;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.996377;PAO=0;PQA=0;PQR=0;PRO=0;QA=2427;QR=10858;RO=276;RPL=0;RPP=144.156;RPPR=602.337;RPR=65;RUN=1;SAF=65;SAP=144.156;SAR=0;SRF=276;SRP=602.337;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:11,9:11:435:9:314:-22.5642,0,-33.4845 0/1:55:38,17:38:1489:17:616:-39.1954,0,-117.712 0/1:32:27,5:27:1063:5:200:-8.74696,0,-86.3322 0/1:79:72,7:72:2837:7:261:-0.0594442,0,-231.682 0/1:77:64,13:64:2513:13:498:-21.9815,0,-203.152 0/1:78:64,14:64:2521:14:538:-25.2767,0,-203.565 dDocent_Contig_7510 42 . G A 265.158 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=3;CIGAR=4M1X5M;DP=352;DPB=339.2;DPRA=0.732143;EPP=9.52472;EPPR=684.853;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=110;QR=12103;RO=314;RPL=0;RPP=9.52472;RPPR=684.853;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=314;SRP=684.853;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:52:44,8,0:44:1667:8,0:283,0:-10.1434,0,-134.633,-23.3887,-137.042,-160.073 0|0:62:54,7,0:54:2091:7,0:263,0:-5.28537,0,-169.66,-21.541,-171.767,-193.31 0|0:75:67,8,0:67:2595:8,0:317,0:-6.31884,0,-211.143,-26.4879,-213.551,-239.644 0|0:66:57,9,0:57:2196:9,0:350,0:-11.99,0,-177.986,-29.1487,-180.695,-209.456 0|0:41:38,0,3:38:1480:0,3:0,110:0,-11.4391,-133.095,-2.08213,-124.106,-123.203 0|0:56:54,0,0:54:2074:0,0:0,0:0,-16.2556,-186.471,-16.2556,-186.471,-186.471 dDocent_Contig_7511 12 . G T 6435.64 . AB=0.0454545;ABP=437.305;AC=0;AF=0;AN=12;AO=11;CIGAR=1X3M1X2M1X4M;DP=482;DPB=482;DPRA=0;EPP=26.8965;EPPR=126.784;GTI=0;LEN=1;MEANALT=8.33333;MQM=60;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=433;QR=2245;RO=57;RPL=0;RPP=26.8965;RPPR=126.784;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=57;SRP=126.784;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:74:2,4,6,37,3,8,9,2,2,0:2:80:4,6,37,3,8,9,2,2,0:155,208,1356,115,278,350,80,76,0:-131.872,-119.739,-125.126,-116.465,-110.322,-121.25,-22.1776,-16.034,-12.7652,-17.6314,-123.034,-116.891,-113.617,-19.3296,-128.722,-109.88,-103.736,-100.463,-6.17933,-107.031,-114.063,-103.707,-97.5634,-94.2899,0,-100.859,-87.7044,-107.589,-125.883,-119.739,-116.465,-22.1778,-123.035,-109.88,-103.707,-131.872,-126.241,-120.097,-116.823,-22.536,-123.392,-110.238,-104.065,-126.241,-132.23,-132.474,-126.33,-123.056,-28.7695,-129.625,-116.471,-110.298,-132.474,-132.832,-139.065 0|0:70:6,0,2,27,8,1,21,2,0,1:6:238:0,2,27,8,1,21,2,0,1:0,75,1005,307,35,807,78,0,41:-126.436,-128.242,-147.836,-122.454,-142.048,-141.446,-46.6563,-66.2505,-60.4634,-58.1227,-103.041,-122.635,-116.848,-41.0505,-120.227,-125.395,-144.989,-139.201,-63.4036,-119.788,-144.688,-61.9887,-81.5837,-75.7961,0,-56.3822,-78.7365,-75.2621,-121.836,-141.429,-135.642,-59.8439,-116.229,-138.582,-75.1768,-140.827,-128.242,-147.836,-142.048,-66.2505,-122.635,-144.989,-81.5837,-141.429,-147.836,-124.858,-144.452,-138.664,-62.8658,-119.251,-141.604,-78.1989,-138.045,-144.452,-144.151 0|0:91:15,0,5,40,3,0,23,0,1,0:15:587:0,5,40,3,0,23,0,1,0:0,183,1472,117,0,883,0,39,0:-139.51,-144.025,-192.292,-129.958,-178.225,-176.72,-24.2129,-72.4811,-58.4157,-60.4399,-134.407,-182.674,-168.607,-62.8629,-181.771,-144.025,-192.292,-178.225,-72.4811,-182.674,-192.292,-71.5404,-119.81,-105.743,0,-110.192,-119.81,-112.886,-144.025,-192.292,-178.225,-72.4811,-182.674,-192.292,-119.81,-192.292,-140.819,-189.086,-175.019,-69.275,-179.468,-189.086,-116.604,-189.086,-188.785,-144.025,-192.292,-178.225,-72.4811,-182.674,-192.292,-119.81,-192.292,-189.086,-192.292 0|0:61:11,1,0,21,8,0,7,2,0,4:11:430:1,0,21,8,0,7,2,0,4:40,0,744,307,0,254,74,0,152:-56.2474,-56.2629,-91.3186,-59.5587,-91.6196,-94.9151,0,-32.0597,-35.3552,-29.0336,-34.3557,-66.4178,-69.7135,-10.1552,-67.3053,-59.5587,-91.6196,-94.9151,-35.3552,-69.7135,-94.9151,-38.821,-70.8823,-74.1779,-14.6212,-48.9762,-74.1779,-72.0707,-53.5045,-85.5656,-88.8611,-29.3019,-63.6594,-88.8611,-68.124,-88.2591,-59.5587,-91.6196,-94.9151,-35.3552,-69.7135,-94.9151,-74.1779,-88.8611,-94.9151,-47.0957,-79.1571,-82.4527,-22.8937,-57.2508,-82.4527,-61.7155,-76.3987,-82.4527,-81.2486 0|0:107:16,6,0,33,21,0,3,25,0,0:16:637:6,0,33,21,0,3,25,0,0:238,0,1231,792,0,115,927,0,0:-119.128,-104.351,-155.002,-123.944,-156.808,-176.401,-23.3428,-56.2077,-75.8009,-65.8669,-59.0393,-91.904,-111.497,-10.8982,-105.176,-123.944,-156.808,-176.401,-75.8009,-111.497,-176.401,-114.505,-147.369,-166.962,-66.3621,-102.058,-166.962,-166.059,-48.1396,-81.0042,-100.597,0,-35.6941,-100.597,-91.1584,-93.0715,-123.944,-156.808,-176.401,-75.8009,-111.497,-176.401,-166.962,-100.597,-176.401,-123.944,-156.808,-176.401,-75.8009,-111.497,-176.401,-166.962,-100.597,-176.401,-176.401 0|0:79:7,0,0,17,12,0,18,16,7,0:7:273:0,0,17,12,0,18,16,7,0:0,0,628,459,0,671,606,269,0:-81.5911,-83.6983,-106.139,-83.6983,-106.139,-106.139,-32.4767,-54.9178,-54.9178,-49.8003,-46.0332,-68.4746,-68.4746,-17.2534,-64.8623,-83.6983,-106.139,-106.139,-54.9178,-68.4746,-106.139,-28.7788,-51.22,-51.22,0,-13.5553,-51.22,-45.8015,-34.0188,-56.4603,-56.4603,-5.23943,-18.7952,-56.4603,-1.5413,-51.6438,-61.6144,-84.0556,-84.0556,-32.8342,-46.3907,-84.0556,-29.1363,-34.3763,-81.9484,-83.6983,-106.139,-106.139,-54.9178,-68.4746,-106.139,-51.22,-56.4603,-84.0556,-106.139 dDocent_Contig_7512 10 . G A 972.904 . AB=0.238095;ABP=115.617;AC=5;AF=0.416667;AN=12;AO=47;CIGAR=1X;DP=231;DPB=231;DPRA=0;EPP=105.07;EPPR=352.145;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.0652;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.923913;PAO=0;PQA=0;PQR=0;PRO=0;QA=1877;QR=7303;RO=184;RPL=0;RPP=105.07;RPPR=402.561;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=178;SRP=352.145;SRR=6;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:16,14:16:632:14:558:-41.53,0,-48.1816 0/1:51:46,5:46:1836:5:190:-2.11268,0,-148.733 0/1:28:23,5:23:915:5:204:-10.3152,0,-74.2255 0/0:42:40,2:40:1585:2:82:0,-4.86358,-135.11 0/1:33:25,8:25:987:8:319:-19.1432,0,-79.1918 0/1:47:34,13:34:1348:13:524:-33.3586,0,-102.092 dDocent_Contig_7513 13 . T A 36.2038 . AB=0.142857;ABP=26.2761;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=179;DPB=179;DPRA=0.664557;EPP=9.52472;EPPR=385.189;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.619318;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=7039;RO=176;RPL=0;RPP=9.52472;RPPR=385.189;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=176;SRP=385.189;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1074:0:0:0,-8.12781,-96.9467 0/0:31:31,0:31:1250:0:0:0,-9.33193,-112.768 0/1:21:18,3:18:722:3:123:-5.14316,0,-58.984 0/0:51:51,0:51:2034:0:0:0,-15.3525,-183.249 0/0:27:27,0:27:1066:0:0:0,-8.12781,-96.2308 0/0:22:22,0:22:893:0:0:0,-6.62266,-80.6763 dDocent_Contig_7514 14 . T C 656.016 . AB=0.136111;ABP=417.062;AC=3;AF=0.25;AN=12;AO=55;CIGAR=1X;DP=576;DPB=576;DPRA=1.43289;EPP=122.441;EPPR=1134.35;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.971209;PAO=0;PQA=0;PQR=0;PRO=0;QA=2200;QR=20681;RO=521;RPL=0;RPP=122.441;RPPR=1134.35;RPR=55;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=521;SRP=1134.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:38,0:38:1503:0:0:0,-11.4391,-135.514 0/0:67:61,6:61:2422:6:220:0,-0.0247912,-197.979 0/0:111:111,0:111:4456:0:0:0,-33.4143,-400.973 0/1:81:65,16:65:2555:16:652:-34.6291,0,-205.708 0/1:136:123,13:123:4835:13:518:-6.02588,0,-394.115 0/1:143:123,20:123:4910:20:810:-30.1678,0,-398.745 dDocent_Contig_7515 15 . G A 1718.18 . AB=0.165289;ABP=591.731;AC=2;AF=0.166667;AN=12;AO=116;CIGAR=1X;DP=1360;DPB=1360;DPRA=0.997797;EPP=254.901;EPPR=2704.32;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.982759;PAIREDR=0.94373;PAO=0;PQA=0;PQR=0;PRO=0;QA=4585;QR=48899;RO=1244;RPL=0;RPP=254.901;RPPR=2704.32;RPR=116;RUN=1;SAF=116;SAP=254.901;SAR=0;SRF=1244;SRP=2704.32;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:131:120,11:120:4728:11:420:0,-1.29377,-387.323 0/0:170:165,5:165:6513:5:201:0,-32.7042,-567.455 0/1:262:206,56:206:8071:56:2222:-121.287,0,-647.129 0/1:343:299,44:299:11698:44:1742:-53.7526,0,-948.827 0/0:94:94,0:94:3700:0:0:0,-28.2968,-333.039 0/0:360:360,0:360:14189:0:0:0,-108.371,-1276.01 dDocent_Contig_7516 73 . A G 597.365 . AB=0.261682;ABP=55.7953;AC=2;AF=0.166667;AN=12;AO=28;CIGAR=1X;DP=350;DPB=350;DPRA=0.880658;EPP=63.8115;EPPR=702.224;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.571429;PAIREDR=0.478261;PAO=0;PQA=0;PQR=0;PRO=0;QA=1050;QR=11923;RO=322;RPL=16;RPP=4.25114;RPPR=78.7825;RPR=12;RUN=1;SAF=16;SAP=4.25114;SAR=12;SRF=214;SRP=78.7825;SRR=108;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:57:57,0:57:2086:0:0:0,-17.1587,-187.991 0/0:52:52,0:52:1866:0:0:0,-15.6536,-168.204 0/0:66:66,0:66:2456:0:0:0,-19.868,-221.248 0/0:68:68,0:68:2551:0:0:0,-20.47,-229.789 0/1:45:30,15:30:1120:15:553:-36.5522,0,-87.55 0/1:62:49,13:49:1844:13:497:-26.4061,0,-147.545 dDocent_Contig_7517 57 . A T 418.661 . AB=0.369565;ABP=9.80795;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=190;DPB=190;DPRA=0.862745;EPP=46.4397;EPPR=372.161;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=768;QR=6663;RO=170;RPL=20;RPP=46.4397;RPPR=372.161;RPR=0;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=170;SRP=372.161;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:582:0:0:0,-4.51545,-52.713 0/0:48:48,0:48:1875:0:0:0,-14.4494,-168.965 0/0:42:39,3:39:1508:3:121:0,-1.36306,-124.68 0/0:39:39,0:39:1545:0:0:0,-11.7402,-139.29 0/1:19:11,8:11:437:8:316:-23.0845,0,-33.9625 0/1:27:18,9:18:716:9:331:-22.0034,0,-56.6375 dDocent_Contig_7518 19 . G A 442.594 . AB=0.15736;ABP=203.899;AC=3;AF=0.25;AN=12;AO=41;CIGAR=1X;DP=429;DPB=429;DPRA=0;EPP=92.0407;EPPR=845.542;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.609756;PAIREDR=0.914948;PAO=0;PQA=0;PQR=0;PRO=0;QA=1566;QR=15117;RO=388;RPL=0;RPP=92.0407;RPPR=845.542;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=388;SRP=845.542;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:116:110,6:110:4242:6:244:0,-12.5807,-359.44 0/1:73:61,12:61:2351:12:447:-18.5914,0,-189.78 0/0:49:48,1:48:1876:1:10:0,-13.7505,-168.047 0/0:67:64,3:64:2507:3:115:0,-9.44523,-215.06 0/1:57:45,12:45:1765:12:472:-25.6699,0,-141.916 0/1:67:60,7:60:2376:7:278:-5.21992,0,-193.831 dDocent_Contig_7519 21 . A T 70.3531 . AB=0.126582;ABP=98.6925;AC=4;AF=0.333333;AN=12;AO=10;CIGAR=1X;DP=120;DPB=120;DPRA=0.963415;EPP=24.725;EPPR=241.872;GTI=0;LEN=1;MEANALT=1;MQM=58.6;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.518182;PAO=0;PQA=0;PQR=0;PRO=0;QA=405;QR=4373;RO=110;RPL=0;RPP=24.725;RPPR=241.872;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=110;SRP=241.872;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:686:0:0:0,-5.11751,-62.07 0/0:24:24,0:24:947:0:0:0,-7.22472,-85.5362 0/1:18:16,2:16:612:2:81:-2.26719,0,-49.9944 0/1:21:18,3:18:728:3:123:-5.14316,0,-59.522 0/1:14:12,2:12:483:2:82:-3.56526,0,-39.6072 0/1:26:23,3:23:917:3:119:-3.23844,0,-75.0093 dDocent_Contig_7520 16 . T C 206.335 . AB=0.25;ABP=24.725;AC=3;AF=0.25;AN=12;AO=11;CIGAR=1X;DP=98;DPB=98;DPRA=0.9;EPP=26.8965;EPPR=191.928;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.701149;PAO=0;PQA=0;PQR=0;PRO=0;QA=449;QR=3468;RO=87;RPL=0;RPP=26.8965;RPPR=191.928;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=87;SRP=191.928;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:836:0:0:0,-6.32163,-75.5492 0/0:14:14,0:14:557:0:0:0,-4.21442,-50.469 0/1:15:12,3:12:482:3:123:-6.94934,0,-39.2147 0/0:23:22,1:22:888:1:41:0,-2.82912,-76.1317 0/1:10:7,3:7:281:3:123:-8.45449,0,-22.6514 0/1:15:11,4:11:424:4:162:-10.4515,0,-33.9854 dDocent_Contig_7521 30 . G C 463.322 . AB=0.146789;ABP=239.243;AC=1;AF=0.0833333;AN=12;AO=75;CIGAR=1X;DP=1226;DPB=1226;DPRA=1.29512;EPP=165.871;EPPR=2491.52;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998255;PAO=0;PQA=0;PQR=0;PRO=0;QA=2955;QR=45729;RO=1146;RPL=0;RPP=165.871;RPPR=2491.52;RPR=75;RUN=1;SAF=75;SAP=165.871;SAR=0;SRF=1146;SRP=2491.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:196:189,6:189:7578:6:240:0,-37.1248,-659.641 0/0:210:199,11:199:7983:11:445:0,-22.8112,-677.619 0/1:218:186,32:186:7450:32:1258:-47.855,0,-604.49 0/0:242:226,16:226:8968:16:642:0,-14.7385,-748.454 0/0:164:160,0:160:6380:0:0:0,-48.1648,-573.527 0/0:196:186,10:186:7370:10:370:0,-25.3642,-629.307 dDocent_Contig_7522 21 . A G 3497.85 . AB=0.833333;ABP=60.9162;AC=3;AF=0.25;AN=12;AO=108;CIGAR=1X;DP=234;DPB=234;DPRA=1.81928;EPP=237.529;EPPR=276.616;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.952381;PAO=0;PQA=0;PQR=0;PRO=0;QA=4260;QR=4922;RO=126;RPL=0;RPP=237.529;RPPR=276.616;RPR=108;RUN=1;SAF=108;SAP=237.529;SAR=0;SRF=126;SRP=276.616;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:752:0:0:0,-6.0206,-67.9895 0/0:31:30,1:30:1154:1:38:0,-5.53466,-100.34 0/0:24:24,0:24:944:0:0:0,-7.22472,-85.2619 0/0:39:39,0:39:1551:0:0:0,-11.7402,-139.834 0/1:60:10,50:10:400:50:1948:-157.464,0,-18.2949 1/1:60:3,57:3:121:57:2274:-193.543,-6.7816,0 dDocent_Contig_7523 71 . A G 1795 . AB=0.134615;ABP=123.611;AC=3;AF=0.25;AN=12;AO=76;CIGAR=1X;DP=725;DPB=725;DPRA=0.595166;EPP=168.042;EPPR=1412.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2625;QR=22072;RO=649;RPL=76;RPP=168.042;RPPR=1412.3;RPR=0;RUN=1;SAF=76;SAP=168.042;SAR=0;SRF=649;SRP=1412.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:145:145,0:145:4859:0:0:0,-43.6493,-437.496 0/0:154:152,2:152:5151:2:70:0,-39.7112,-457.123 0/1:104:90,14:90:3049:14:502:-14.2101,0,-243.335 0/0:186:186,0:186:6380:0:0:0,-55.9916,-574.315 1/1:54:0,54:0:0:54:1847:-166.512,-16.2556,0 0/0:82:76,6:76:2633:6:206:0,-5.80826,-218.344 dDocent_Contig_7526 32 . A T 170.707 . AB=0.0909091;ABP=34.9902;AC=0;AF=0;AN=12;AO=4;CIGAR=1M1X5M;DP=205;DPB=207;DPRA=0.663717;EPP=11.6962;EPPR=404.733;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=59.9027;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.972973;PAO=0;PQA=0;PQR=0;PRO=0;QA=142;QR=7190;RO=185;RPL=0;RPP=11.6962;RPPR=404.733;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=185;SRP=404.733;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:22:17,3,2:17:670:3,2:109,75:-3.77506,0,-54.2379,-2.7446,-48.9997,-57.2926 0|0:42:33,8,0:33:1237:8,0:321,0:-16.5162,0,-98.8709,-26.4502,-101.279,-127.733 0|0:44:41,3,0:41:1602:3,0:118,0:0,-2.2426,-133.384,-12.3422,-134.287,-143.994 0|0:28:26,0,2:26:1018:0,2:0,67:0,-7.82678,-91.5871,-2.06631,-86.1656,-85.5635 0|0:29:29,0,0:29:1136:0,0:0,0:0,-8.72987,-102.535,-8.72987,-102.535,-102.535 0|0:40:39,0,0:39:1527:0,0:0,0:0,-11.7402,-137.292,-11.7402,-137.292,-137.292 dDocent_Contig_7528 35 . A C 1595.16 . AB=0.198547;ABP=328.999;AC=5;AF=0.416667;AN=12;AO=82;CIGAR=1M1D1M1X;DP=434;DPB=413.5;DPRA=3.93333;EPP=181.071;EPPR=765.197;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3238;QR=13753;RO=351;RPL=0;RPP=181.071;RPPR=765.197;RPR=82;RUN=1;SAF=82;SAP=181.071;SAR=0;SRF=351;SRP=765.197;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:76:65,11:65:2540:11:420:-15.2596,0,-205.885 0|1:51:44,7:44:1719:7:282:-10.4004,0,-139.596 0|1:47:41,6:41:1632:6:236:-7.46208,0,-132.975 0|0:21:20,0:20:794:0:0:0,-6.0206,-71.5349 0|1:126:96,30:96:3707:30:1186:-69.083,0,-295.771 0|1:113:85,28:85:3361:28:1114:-66.5329,0,-268.556 dDocent_Contig_7529 15 . T G 219.511 . AB=0.13;ABP=121.92;AC=3;AF=0.25;AN=12;AO=19;CIGAR=4M1X2M;DP=254;DPB=255.714;DPRA=0;EPP=44.2683;EPPR=478.563;GTI=0;LEN=1;MEANALT=2.4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.986301;PAO=0;PQA=0;PQR=0;PRO=0;QA=748;QR=7649;RO=219;RPL=0;RPP=44.2683;RPPR=478.563;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=219;SRP=478.563;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:25:15,4,5:15:522:4,5:150,201:-12.0613,-4.29957,-45.5019,0,-30.1298,-40.9161 0|0:72:65,2,4:65:2320:2,4:68,164:0,-14.0541,-202.586,-5.94516,-189.649,-193.959 0|1:8:7,0,1:7:252:0,1:0,41:-1.68633,-3.79354,-24.3117,0,-20.9214,-20.6204 0|1:67:57,2,7:57:2056:2,7:38,260:-4.24707,-18.6187,-185.815,0,-165.146,-165.851 0|0:11:7,4,0:7:224:4,0:153,0:-10.8304,0,-17.1633,-12.9376,-18.3674,-30.9454 0|0:71:68,0,2:68:2275:0,2:0,82:0,-20.47,-204.685,-13.5422,-197.915,-197.313 dDocent_Contig_7530 108 . T A 666.164 . AB=0.439024;ABP=5.65844;AC=2;AF=0.166667;AN=12;AO=36;CIGAR=1X;DP=307;DPB=307;DPRA=0.728889;EPP=81.1833;EPPR=589.308;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.944444;PAIREDR=0.940741;PAO=0;PQA=0;PQR=0;PRO=0;QA=1044;QR=8328;RO=270;RPL=0;RPP=81.1833;RPPR=589.308;RPR=36;RUN=1;SAF=0;SAP=81.1833;SAR=36;SRF=0;SRP=589.308;SRR=270;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:39,0:39:1226:0:0:0,-11.7402,-110.626 0/0:78:77,0:77:2339:0:0:0,-23.1793,-210.715 0/0:62:62,0:62:1953:0:0:0,-18.6639,-176.043 0/0:46:46,0:46:1376:0:0:0,-13.8474,-124.112 0/1:36:19,17:19:617:17:489:-33.452,0,-45.0025 0/1:46:27,19:27:817:19:555:-36.3862,0,-59.9675 dDocent_Contig_7531 10 . A G 89.005 . AB=0.138462;ABP=76.807;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=246;DPB=246;DPRA=0.869565;EPP=33.4109;EPPR=506.792;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.508621;PAO=0;PQA=0;PQR=0;PRO=0;QA=548;QR=9267;RO=232;RPL=0;RPP=33.4109;RPPR=506.792;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=232;SRP=506.792;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:12,4:12:482:4:144:-8.4927,0,-38.9138 0/1:49:44,5:44:1778:5:200:-3.62795,0,-145.479 0/0:46:46,0:46:1845:0:0:0,-13.8474,-166.254 0/0:42:41,1:41:1650:1:41:0,-8.54869,-144.633 0/0:39:37,2:37:1470:2:81:0,-4.05444,-124.862 0/0:54:52,2:52:2042:2:82:0,-8.47594,-176.193 dDocent_Contig_7533 11 . G C 3286.12 . AB=0.199507;ABP=639.861;AC=5;AF=0.416667;AN=12;AO=162;CIGAR=1X;DP=908;DPB=908;DPRA=1.69167;EPP=354.789;EPPR=1622.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997319;PAO=0;PQA=0;PQR=0;PRO=0;QA=6455;QR=29713;RO=746;RPL=0;RPP=354.789;RPPR=1622.93;RPR=162;RUN=1;SAF=162;SAP=354.789;SAR=0;SRF=746;SRP=1622.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:81:61,20:61:2420:20:788:-46.8541,0,-193.566 0/1:167:142,25:142:5664:25:1004:-40.3844,0,-459.312 0/1:76:34,42:34:1363:42:1686:-129.081,0,-100.041 0/1:90:57,33:57:2272:33:1315:-91.5176,0,-177.555 0/1:398:356,42:356:14174:42:1662:-29.9967,0,-1154.78 0/0:96:96,0:96:3820:0:0:0,-28.8989,-343.805 dDocent_Contig_7534 8 . T C 8685.42 . AB=0.688836;ABP=133.407;AC=6;AF=0.5;AN=12;AO=290;CIGAR=1X;DP=421;DPB=421;DPRA=0;EPP=632.737;EPPR=287.473;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.948276;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11167;QR=5033;RO=131;RPL=0;RPP=632.737;RPPR=287.473;RPR=290;RUN=1;SAF=290;SAP=632.737;SAR=0;SRF=131;SRP=287.473;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:81:16,65:16:616:65:2492:-200.093,0,-31.396 0/1:77:37,40:37:1432:40:1535:-115.241,0,-105.979 0/1:55:29,26:29:1121:26:998:-73.5742,0,-84.6351 0/1:82:22,60:22:845:60:2312:-183.605,0,-51.6885 0/1:30:8,22:8:310:22:844:-67.2514,0,-19.2327 0/1:96:19,77:19:709:77:2986:-239.999,0,-35.2302 dDocent_Contig_7535 109 . C A 68.6779 . AB=0.375;ABP=4.09604;AC=1;AF=0.1;AN=10;AO=3;CIGAR=1X1M1X3M1X;DP=60;DPB=60;DPRA=0.648649;EPP=9.52472;EPPR=115.927;GTI=0;LEN=1;MEANALT=1;MQM=14.6667;MQMR=60;NS=5;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=105;QR=1751;RO=52;RPL=0;RPP=9.52472;RPPR=115.927;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=115.927;SRR=52;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 0|0:17:16,0,0:16:538:0,0:0,0:0,-4.81648,-48.6548,-4.81648,-48.6548,-48.6548 0|0:15:11,0,4:11:372:0,4:0,140:-8.42948,-11.7408,-41.8899,0,-30.4958,-29.2917 0|0:10:10,0,0:10:328:0,0:0,0:0,-3.0103,-29.8394,-3.0103,-29.8394,-29.8394 0|1:8:5,3,0:5:172:3,0:105,0:-1.68732,0,-13.4102,-3.19247,-14.3133,-17.2854 0|0:10:10,0,0:10:341:0,0:0,0:0,-3.0103,-31.0207,-3.0103,-31.0207,-31.0207 dDocent_Contig_7536 11 . C T 125.066 . AB=0.222222;ABP=21.1059;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=274;DPB=274;DPRA=0.583815;EPP=24.725;EPPR=576.279;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.822;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.92803;PAO=0;PQA=0;PQR=0;PRO=0;QA=403;QR=10666;RO=264;RPL=0;RPP=24.725;RPPR=576.279;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=264;SRP=576.279;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:52:52,0:52:2106:0:0:0,-15.6536,-189.71 0/0:24:23,1:23:928:1:38:0,-3.42745,-79.7203 0/1:27:21,6:21:834:6:242:-14.0295,0,-67.2406 0/0:97:97,0:97:3934:0:0:0,-29.1999,-354.002 0/0:50:47,3:47:1901:3:123:0,-3.58671,-159.82 0/0:24:24,0:24:963:0:0:0,-7.22472,-86.9649 dDocent_Contig_7537 16 . T A 2939.87 . AB=0.351097;ABP=64.4446;AC=5;AF=0.416667;AN=12;AO=114;CIGAR=1X;DP=379;DPB=379;DPRA=0;EPP=250.558;EPPR=578.45;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.649123;PAIREDR=0.818868;PAO=0;PQA=0;PQR=0;PRO=0;QA=4501;QR=10719;RO=265;RPL=0;RPP=250.558;RPPR=578.45;RPR=114;RUN=1;SAF=114;SAP=250.558;SAR=0;SRF=265;SRP=578.45;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:48:22,26:22:900:26:1036:-79.078,0,-66.8535 0/1:73:46,27:46:1851:27:1068:-74.4347,0,-144.82 0/1:52:28,24:28:1126:24:933:-68.6152,0,-85.9674 0/1:65:42,23:42:1711:23:895:-61.283,0,-134.635 0/0:60:58,2:58:2347:2:82:0,-10.2821,-203.596 0/1:81:69,12:69:2784:12:487:-19.7982,0,-226.271 dDocent_Contig_7538 35 . A C 283.099 . AB=0.25;ABP=31.2394;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1M1X13M;DP=113;DPB=113.4;DPRA=0.852459;EPP=31.2394;EPPR=207.129;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.846154;PAIREDR=0.946809;PAO=0;PQA=0;PQR=0;PRO=0;QA=479;QR=3656;RO=94;RPL=0;RPP=31.2394;RPPR=207.129;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=94;SRP=207.129;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:11:8,2,1:8:316:2,1:76,30:-3.87742,0,-25.4855,-3.91366,-23.6995,-29.6279 0|1:23:13,4,6:13:503:4,6:123,207:-12.9149,-6.98003,-47.1215,0,-31.5329,-39.5713 0|1:18:12,0,6:12:473:0,6:0,242:-16.7384,-20.3508,-59.2609,0,-39.31,-37.5038 0|0:25:25,0,0:25:970:0,0:0,0:0,-7.52575,-87.6067,-7.52575,-87.6067,-87.6067 0|0:11:11,0,0:11:430:0,0:0,0:0,-3.31133,-39.0519,-3.31133,-39.0519,-39.0519 0|0:25:25,0,0:25:964:0,0:0,0:0,-7.52575,-87.0674,-7.52575,-87.0674,-87.0674 dDocent_Contig_7539 62 . G A 27874.5 . AB=0.54553;ABP=24.761;AC=8;AF=0.666667;AN=12;AO=659;CIGAR=8M1X5M1X;DP=1208;DPB=1229.13;DPRA=0;EPP=1434.01;EPPR=339.589;GTI=0;LEN=1;MEANALT=6.66667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.99393;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=24804;QR=5956;RO=155;RPL=659;RPP=1434.01;RPPR=339.589;RPR=0;RUN=1;SAF=659;SAP=1434.01;SAR=0;SRF=155;SRP=339.589;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:117:25,1,6,84:25:938:1,6,84:23,223,3136:-249.265,-255.023,-331.546,-238.54,-313.597,-313.558,0,-75.1019,-58.6142,-51.5801 0|1:176:46,3,13,108:46:1755:3,13,108:110,497,4053:-318.185,-323.041,-466.11,-291.25,-426.232,-431.31,0,-135.022,-103.228,-111.503 0|1:171:34,2,0,133:34:1324:2,0,133:71,0,4989:-398.384,-402.836,-511.048,-408.619,-511.65,-517.434,0,-103.04,-108.822,-68.7851 0|1:138:19,0,0,115:19:749:0,0,115:0,0,4309:-347.249,-352.968,-414.596,-352.968,-414.596,-414.596,0,-61.6958,-61.6958,-27.0774 1|1:254:4,120,0,121:4:156:120,0,121:4421,0,4594:-724.153,-363.887,-340.587,-725.357,-376.711,-738.181,-348.659,0,-361.483,-325.058 1|1:352:27,186,0,98:27:1034:186,0,98:6728,0,3723:-761.44,-220.449,-249.303,-769.568,-305.294,-854.413,-464.273,0,-549.119,-519.618 dDocent_Contig_7540 20 . T C 378.099 . AB=0.181102;ABP=115.192;AC=4;AF=0.333333;AN=12;AO=25;CIGAR=1X;DP=199;DPB=199;DPRA=0;EPP=28.1125;EPPR=378.675;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.72;PAIREDR=0.803468;PAO=0;PQA=0;PQR=0;PRO=0;QA=976;QR=6539;RO=173;RPL=0;RPP=57.2971;RPPR=378.675;RPR=25;RUN=1;SAF=21;SAP=28.1125;SAR=4;SRF=173;SRP=378.675;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:15,7:15:577:7:285:-19.4015,0,-45.6457 0/1:42:37,5:37:1373:5:193:-5.09498,0,-111.193 0/0:28:27,1:27:1024:1:41:0,-4.33427,-88.3642 0/1:40:30,9:30:1153:9:337:-18.5318,0,-91.9165 0/1:23:21,2:21:787:2:80:-0.667885,0,-64.2284 0/0:44:43,1:43:1625:1:40:0,-9.24964,-142.512 dDocent_Contig_7541 19 . G A 129.082 . AB=0.15;ABP=66.8516;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=415;DPB=415;DPRA=0.757475;EPP=31.2394;EPPR=875.942;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.920398;PAO=0;PQA=0;PQR=0;PRO=0;QA=511;QR=15939;RO=402;RPL=0;RPP=31.2394;RPPR=875.942;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=402;SRP=875.942;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:50,4:50:2002:4:154:0,-2.0262,-166.14 0/1:60:51,9:51:2006:9:357:-14.4311,0,-162.681 0/0:51:51,0:51:2029:0:0:0,-15.3525,-182.805 0/0:53:53,0:53:2115:0:0:0,-15.9546,-190.524 0/0:89:89,0:89:3488:0:0:0,-26.7917,-313.963 0/0:108:108,0:108:4299:0:0:0,-32.5112,-386.862 dDocent_Contig_7542 49 . G A 256.694 . AB=0.323529;ABP=12.2071;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=142;DPB=142;DPRA=1.57407;EPP=26.8965;EPPR=287.473;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.969466;PAO=0;PQA=0;PQR=0;PRO=0;QA=412;QR=4761;RO=131;RPL=0;RPP=26.8965;RPPR=287.473;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=131;SRP=287.473;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:752:0:0:0,-6.0206,-68.007 0/1:34:23,11:23:834:11:412:-27.1923,0,-65.1391 0/0:26:26,0:26:918:0:0:0,-7.82678,-82.9234 0/0:14:14,0:14:505:0:0:0,-4.21442,-45.7834 0/0:37:37,0:37:1344:0:0:0,-11.1381,-121.249 0/0:11:11,0:11:408:0:0:0,-3.31133,-37.0657 dDocent_Contig_7543 15 . T C 450.758 . AB=0.395349;ABP=7.10075;AC=3;AF=0.25;AN=12;AO=19;CIGAR=1X;DP=117;DPB=117;DPRA=0.829545;EPP=44.2683;EPPR=215.815;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=771;QR=3913;RO=98;RPL=0;RPP=44.2683;RPPR=215.815;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=98;SRP=215.815;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1130:0:0:0,-8.42884,-101.982 0/0:16:16,0:16:643:0:0:0,-4.81648,-58.2039 0/0:30:28,2:28:1122:2:81:0,-1.34517,-93.5777 0/1:5:2,3:2:66:3:123:-9.95964,0,-4.75956 0/1:23:16,7:16:630:7:284:-19.0101,0,-50.1066 0/1:15:8,7:8:322:7:283:-21.3277,0,-24.8318 dDocent_Contig_7544 8 . T A 52980.9 . AB=0.0505529;ABP=5556.23;AC=6;AF=0.5;AN=12;AO=160;CIGAR=1X4M;DP=3165;DPB=3165.2;DPRA=0;EPP=341.814;EPPR=812.97;GTI=0;LEN=1;MEANALT=11.5;MQM=59.75;MQMR=59.9062;NS=6;NUMALT=6;ODDS=0;PAIRED=0.99375;PAIREDR=0.997319;PAO=0;PQA=0;PQR=0;PRO=0;QA=6080;QR=14497;RO=373;RPL=0;RPP=350.446;RPPR=812.97;RPR=160;RUN=1;SAF=159;SAP=341.814;SAR=1;SRF=373;SRP=812.97;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:467:32,21,34,278,15,27,40:32:1236:21,34,278,15,27,40:823,1319,10777,582,1034,1599:-893.037,-834.99,-930.181,-794.805,-828.639,-886.084,-22.3521,-56.1852,-16.0012,-40.1795,-854.854,-888.687,-848.503,-76.0501,-951.852,-817.81,-851.644,-811.459,-39.0065,-871.508,-911.196,-778.803,-812.636,-772.452,0,-832.501,-795.457,-868.275 0|1:714:82,36,36,419,19,43,54:82:3191:36,36,419,19,43,54:1388,1378,16316,740,1670,2165:-1314.28,-1224.99,-1476.4,-1227.44,-1375.71,-1478.85,0,-148.274,-150.719,-136.118,-1278.17,-1426.44,-1428.88,-201.448,-1534.7,-1201.74,-1350.01,-1352.46,-125.022,-1403.19,-1451.04,-1178.51,-1326.78,-1329.22,-101.79,-1379.95,-1303.53,-1424.5 0|1:510:69,28,24,259,17,31,67:69:2682:28,24,259,17,31,67:1090,930,10039,667,1153,2701:-799.016,-730.205,-942.166,-746.026,-876.834,-959.191,0,-130.808,-146.629,-142.423,-764.957,-895.765,-911.585,-165.56,-980.229,-725.424,-856.231,-872.052,-126.028,-890.983,-936.481,-602.289,-733.097,-748.918,-2.89098,-767.849,-728.316,-802.51 0|1:659:100,25,47,310,19,39,92:100:3909:25,47,310,19,39,92:975,1823,12029,739,1487,3681:-951.776,-901.735,-1215.59,-833.147,-1074.39,-1140.38,0,-241.244,-172.656,-228.069,-921.161,-1162.4,-1093.81,-260.67,-1236.83,-859.894,-1101.13,-1032.55,-199.403,-1120.56,-1169.54,-721.336,-962.576,-893.988,-60.8495,-982.002,-920.735,-1015.02 1|0:336:27,2,35,174,36,11,48:27:1040:2,35,174,36,11,48:78,1354,6745,1409,411,1920:-615.464,-617.18,-701.969,-512.381,-591.361,-587.237,-72.2296,-151.208,-46.4108,-105.241,-507.916,-586.896,-482.098,-41.9452,-582.471,-589.941,-668.921,-564.123,-123.971,-559.658,-672.021,-465.973,-544.953,-440.154,0,-435.689,-517.714,-536.915 0|1:479:63,16,36,237,36,9,69:63:2439:16,36,237,36,9,69:625,1386,9221,1399,325,2719:-735.733,-703.316,-897.576,-642.447,-790.141,-830.686,0,-147.698,-86.828,-127.737,-639.78,-787.474,-726.605,-84.1604,-828.02,-728.449,-876.143,-815.274,-172.832,-812.608,-924.816,-570.905,-718.599,-657.73,-15.2941,-655.063,-743.732,-749.209 dDocent_Contig_7545 16 . G A 5081.92 . AB=0.475806;ABP=4.90158;AC=6;AF=0.5;AN=12;AO=177;CIGAR=1X;DP=372;DPB=372;DPRA=0;EPP=387.361;EPPR=426.447;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9436;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.989744;PAO=0;PQA=0;PQR=0;PRO=0;QA=6997;QR=7620;RO=195;RPL=0;RPP=387.361;RPPR=426.447;RPR=177;RUN=1;SAF=177;SAP=387.361;SAR=0;SRF=195;SRP=426.447;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:53:33,20:33:1308:20:797:-56.0946,0,-102.025 0/1:44:37,7:37:1411:7:271:-11.5079,0,-113.99 0/1:27:17,10:17:691:10:405:-28.6826,0,-54.3903 0/1:51:19,32:19:728:32:1270:-99.2199,0,-50.4763 0/1:100:50,50:50:1945:50:1966:-147.032,0,-145.146 0/1:97:39,58:39:1537:58:2288:-176.877,0,-109.369 dDocent_Contig_7547 11 . T C 7258.03 . AB=0.542601;ABP=10.0408;AC=6;AF=0.5;AN=12;AO=242;CIGAR=1X4M;DP=446;DPB=445.8;DPRA=0;EPP=528.507;EPPR=428.619;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.991736;PAIREDR=0.928571;PAO=0;PQA=0;PQR=0;PRO=0;QA=9656;QR=7723;RO=196;RPL=0;RPP=528.507;RPPR=428.619;RPR=242;RUN=1;SAF=242;SAP=528.507;SAR=0;SRF=196;SRP=428.619;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:87:51,0,35:51:2019:0,35:0,1396:-99.6133,-114.966,-281.129,0,-166.161,-155.625 0|1:69:36,0,32:36:1412:0,32:0,1271:-93.7947,-104.632,-220.746,0,-116.109,-106.476 0|1:33:8,0,24:8:308:0,24:0,967:-77.5759,-79.9841,-105.269,0,-25.531,-18.3062 0|1:77:40,4,33:40:1566:4,33:138,1324:-97.0981,-97.9397,-225.488,0,-117.598,-118.866 0|1:109:28,0,80:28:1100:0,80:0,3184:-253.806,-262.235,-352.705,0,-90.5412,-66.4588 0|1:71:33,0,38:33:1318:0,38:0,1514:-115.136,-125.07,-233.627,0,-108.955,-97.516 dDocent_Contig_7548 16 . G A 19329.3 . AB=0.90553;ABP=622.951;AC=8;AF=0.666667;AN=12;AO=603;CIGAR=1X;DP=650;DPB=650;DPRA=0;EPP=1312.41;EPPR=105.07;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=23245;QR=1843;RO=47;RPL=0;RPP=1312.41;RPPR=105.07;RPR=603;RUN=1;SAF=603;SAP=1312.41;SAR=0;SRF=47;SRP=105.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:135:12,123:12:474:123:4698:-382.202,0,-2.37281 1/1:128:6,122:6:237:122:4717:-402.844,-16.8282,0 0/1:98:10,88:10:390:88:3395:-276.142,0,-5.95574 0/1:126:12,114:12:469:114:4401:-358.163,0,-4.63188 1/1:88:0,88:0:0:88:3407:-306.733,-26.4906,0 0/1:75:7,68:7:273:68:2627:-214.009,0,-2.36022 dDocent_Contig_7550 114 . C T 1194.59 . AB=0.353383;ABP=27.8435;AC=6;AF=0.5;AN=12;AO=47;CIGAR=1X;DP=133;DPB=133;DPRA=0;EPP=105.07;EPPR=189.757;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.595745;PAIREDR=0.569767;PAO=0;PQA=0;PQR=0;PRO=0;QA=1873;QR=3440;RO=86;RPL=47;RPP=105.07;RPPR=189.757;RPR=0;RUN=1;SAF=0;SAP=105.07;SAR=47;SRF=0;SRP=189.757;SRR=86;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:23,10:23:911:10:407:-27.0564,0,-72.3581 0/1:21:16,5:16:645:5:196:-11.6906,0,-52.0609 0/1:7:4,3:4:147:3:107:-7.87019,0,-11.4761 0/1:28:21,7:21:848:7:268:-16.0471,0,-68.2031 0/1:21:11,10:11:444:10:405:-30.4886,0,-33.9936 0/1:23:11,12:11:445:12:490:-37.5274,0,-33.4822 dDocent_Contig_7551 22 . G A 4639.5 . AB=0.460452;ABP=7.81944;AC=6;AF=0.5;AN=12;AO=163;CIGAR=1X;DP=354;DPB=354;DPRA=0;EPP=356.96;EPPR=417.762;GTI=0;LEN=1;MEANALT=1;MQM=59.9448;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.871166;PAIREDR=0.832461;PAO=0;PQA=0;PQR=0;PRO=0;QA=6445;QR=7559;RO=191;RPL=0;RPP=356.96;RPPR=417.762;RPR=163;RUN=1;SAF=163;SAP=356.96;SAR=0;SRF=191;SRP=417.762;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:46:28,18:28:1084:18:720:-51.2536,0,-84.0013 0/1:83:53,30:53:2118:30:1203:-83.5598,0,-165.819 0/1:58:27,31:27:1052:31:1207:-91.4263,0,-77.5099 0/1:60:40,20:40:1601:20:780:-52.4494,0,-126.266 0/1:62:31,31:31:1226:31:1229:-92.2199,0,-91.944 0/1:45:12,33:12:478:33:1306:-104.263,0,-29.8239 dDocent_Contig_7552 9 . T C 48.2085 . AB=0.125;ABP=61.6401;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=213;DPB=213;DPRA=1.73077;EPP=20.3821;EPPR=448.162;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=305;QR=7668;RO=205;RPL=0;RPP=20.3821;RPPR=448.162;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=205;SRP=448.162;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:35,1:35:1283:1:39:0,-6.94052,-111.864 0/0:47:47,0:47:1736:0:0:0,-14.1484,-156.505 0/0:51:50,1:50:1888:1:39:0,-11.456,-166.272 0/1:48:42,6:42:1577:6:227:-6.3437,0,-127.755 0/0:5:5,0:5:195:0:0:0,-1.50515,-17.9242 0/0:26:26,0:26:989:0:0:0,-7.82678,-89.3196 dDocent_Contig_7553 30 . C T 2696.83 . AB=0.267139;ABP=202.236;AC=4;AF=0.333333;AN=12;AO=113;CIGAR=1X;DP=523;DPB=523;DPRA=2.115;EPP=248.387;EPPR=893.314;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.885366;PAO=0;PQA=0;PQR=0;PRO=0;QA=4479;QR=16207;RO=410;RPL=0;RPP=248.387;RPPR=893.314;RPR=113;RUN=1;SAF=113;SAP=248.387;SAR=0;SRF=410;SRP=893.314;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:66:46,20:46:1803:20:798:-52.2698,0,-142.607 0/1:77:57,20:57:2273:20:812:-50.2158,0,-181.554 0/1:105:49,56:49:1960:56:2201:-166.649,0,-144.99 0/1:175:158,17:158:6259:17:668:-7.77023,0,-510.404 0/0:33:33,0:33:1268:0:0:0,-9.93399,-114.382 0/0:67:67,0:67:2644:0:0:0,-20.169,-238.084 dDocent_Contig_7555 36 . T G 490.758 . AB=0.289157;ABP=35.0591;AC=3;AF=0.25;AN=12;AO=29;CIGAR=1X;DP=236;DPB=236;DPRA=1.01026;EPP=65.983;EPPR=452.505;GTI=0;LEN=1;MEANALT=1;MQM=52.931;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1123;QR=8016;RO=207;RPL=0;RPP=65.983;RPPR=452.505;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=207;SRP=452.505;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:39,2:39:1513:2:77:0,-5.03309,-129.116 0/0:39:39,0:39:1515:0:0:0,-11.7402,-136.602 0/0:73:70,3:70:2684:3:118:0,-10.9725,-230.711 0/1:43:39,4:39:1505:4:160:-1.83951,0,-122.745 0/1:22:11,11:11:440:11:424:-31.8889,0,-33.333 0/1:18:9,9:9:359:9:344:-20.3614,0,-27.2546 dDocent_Contig_7556 21 . T G 46.9295 . AB=0.147059;ABP=39.7976;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=141;DPB=141;DPRA=1.39759;EPP=16.0391;EPPR=296.159;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.674074;PAO=0;PQA=0;PQR=0;PRO=0;QA=219;QR=4966;RO=135;RPL=0;RPP=16.0391;RPPR=296.159;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=135;SRP=296.159;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:502:0:0:0,-4.21442,-45.5098 0/0:25:25,0:25:885:0:0:0,-7.52575,-79.9471 0/0:18:18,0:18:661:0:0:0,-5.41854,-59.8166 0/0:26:26,0:26:976:0:0:0,-7.82678,-88.152 0/1:34:29,5:29:1086:5:179:-6.21582,0,-87.8068 0/0:24:23,1:23:856:1:40:0,-3.22904,-73.3628 dDocent_Contig_7557 47 . G A 5422.14 . AB=0.394477;ABP=52.0462;AC=5;AF=0.416667;AN=12;AO=200;CIGAR=1M1I1M1X1M1X1M3X1M1X;DP=619;DPB=637.182;DPRA=0.905357;EPP=437.305;EPPR=899.828;GTI=0;LEN=1;MEANALT=1.8;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7807;QR=16159;RO=413;RPL=0;RPP=437.305;RPPR=899.828;RPR=200;RUN=1;SAF=200;SAP=437.305;SAR=0;SRF=413;SRP=899.828;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:71:27,44:27:1046:44:1718:-133.488,0,-73.0656 0|1:79:58,20:58:2247:20:764:-45.2007,0,-178.549 0|1:54:20,33:20:776:33:1288:-99.8377,0,-53.7997 0|1:104:39,65:39:1520:65:2543:-197.733,0,-105.751 0|0:112:110,0:110:4306:0:0:0,-33.1133,-387.277 0|1:199:159,38:159:6264:38:1494:-75.1765,0,-504.052 dDocent_Contig_7558 43 . C T 631.159 . AB=0.168067;ABP=230.778;AC=3;AF=0.25;AN=12;AO=47;CIGAR=1X;DP=622;DPB=622;DPRA=0;EPP=105.07;EPPR=1247.26;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.938918;PAO=0;PQA=0;PQR=0;PRO=0;QA=1822;QR=22540;RO=573;RPL=0;RPP=105.07;RPPR=1247.26;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=573;SRP=1247.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:100:95,5:95:3709:5:199:0,-11.8144,-315.529 0/1:154:130,23:130:5124:23:902:-35.32,0,-414.892 0/1:76:63,13:63:2498:13:484:-21.0092,0,-202.086 0/0:232:230,1:230:9070:1:41:0,-65.8429,-811.699 0/0:52:51,1:51:2010:1:40:0,-11.6579,-177.104 0/1:8:4,4:4:129:4:156:-12.0086,0,-9.51206 dDocent_Contig_7559 39 . T C 222.513 . AB=0.120482;ABP=106.849;AC=0;AF=0;AN=12;AO=23;CIGAR=1M2X11M;DP=529;DPB=512.714;DPRA=1.68929;EPP=52.9542;EPPR=1049.68;GTI=0;LEN=1;MEANALT=1.8;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.826087;PAIREDR=0.82716;PAO=0;PQA=0;PQR=0;PRO=0;QA=890;QR=19001;RO=486;RPL=0;RPP=52.9542;RPPR=1049.68;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=486;SRP=1058.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:70:68,0,2:68:2657:0,2:0,79:0,-20.47,-238.898,-13.5745,-232.396,-231.794 0|0:129:119,4,5:119:4676:4,5:146,192:0,-23.8898,-407.332,-20.0372,-392.778,-403.199 0|0:56:56,0,0:56:2196:0,0:0,0:0,-16.8577,-197.837,-16.8577,-197.837,-197.837 0|0:115:110,1,4:110:4305:1,4:39,159:0,-29.9089,-383.562,-20.0168,-370.772,-372.774 0|0:83:59,14,10:59:2290:14,10:509,401:-23.7742,0,-183.926,-8.48151,-155.1,-193.642 0|0:76:74,0,2:74:2877:0,2:0,59:0,-22.2762,-258.779,-17.2744,-254.075,-253.473 dDocent_Contig_7560 74 . C T 715.437 . AB=0.163121;ABP=280.99;AC=3;AF=0.25;AN=12;AO=57;CIGAR=1X;DP=593;DPB=593;DPRA=0;EPP=126.784;EPPR=1166.92;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.77193;PAIREDR=0.858209;PAO=0;PQA=0;PQR=0;PRO=0;QA=2223;QR=21089;RO=536;RPL=57;RPP=126.784;RPPR=1166.92;RPR=0;RUN=1;SAF=57;SAP=126.784;SAR=0;SRF=536;SRP=1166.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:83:74,9:74:2863:9:349:-6.78385,0,-232.813 0/0:98:95,3:95:3728:3:118:0,-18.4984,-324.559 0/0:87:83,4:83:3286:4:160:0,-11.4058,-281.027 0/0:126:122,4:122:4811:4:160:0,-23.1462,-418.152 0/1:105:79,26:79:3108:26:1020:-60.4921,0,-248.207 0/1:94:83,11:83:3293:11:416:-9.48952,0,-268.151 dDocent_Contig_7561 31 . C G 3590.76 . AB=0.152381;ABP=113.218;AC=0;AF=0;AN=12;AO=16;CIGAR=3M2X3M;DP=309;DPB=307.875;DPRA=0;EPP=37.7539;EPPR=354.789;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.5625;PAIREDR=0.512346;PAO=0;PQA=0;PQR=0;PRO=0;QA=620;QR=6308;RO=162;RPL=0;RPP=37.7539;RPPR=354.789;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=162;SRP=354.789;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:50:45,0,0,5:45:1740:0,0,5:0,0,193:-2.68891,-16.2353,-159.142,-16.2353,-159.142,-159.142,0,-143.292,-143.292,-141.787 0|0:57:35,0,0,22:35:1369:0,0,22:0,0,886:-62.8906,-73.4267,-185.975,-73.4267,-185.975,-185.975,0,-112.946,-112.946,-106.324 0|0:38:27,0,0,11:27:1056:0,0,11:0,0,446:-29.0568,-37.1846,-123.994,-37.1846,-123.994,-123.994,0,-87.2103,-87.2103,-83.899 0|0:59:32,3,0,23:32:1251:3,0,23:116,0,922:-66.3347,-66.4413,-168.381,-75.9677,-169.284,-178.812,0,-93.322,-102.85,-95.9259 0|0:43:7,0,4,32:7:263:0,4,32:0,162,1281:-103.413,-105.52,-127.06,-92.1613,-113.701,-112.497,0,-21.5255,-8.15655,-11.8925 0|0:62:16,0,12,33:16:629:0,12,33:0,458,1342:-105.9,-110.716,-162.452,-73.1543,-124.888,-121.275,0,-51.7459,-14.1812,-41.8119 dDocent_Contig_7562 13 . T A 12122.2 . AB=0.0624277;ABP=1441.58;AC=6;AF=0.5;AN=12;AO=54;CIGAR=1X4M;DP=865;DPB=865;DPRA=0;EPP=120.27;EPPR=847.713;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.11022e-16;PAIRED=0.259259;PAIREDR=0.362468;PAO=0;PQA=0;PQR=0;PRO=0;QA=2114;QR=15303;RO=389;RPL=0;RPP=120.27;RPPR=847.713;RPR=54;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=389;SRP=847.713;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:194:59,130,4:59:2327:130,4:5161,160:-401.628,0,-152.335,-406.209,-178.289,-596.465 0|1:201:91,85,25:91:3579:85,25:3343,963:-242.254,0,-268.817,-190.589,-215.347,-477.465 0|1:169:51,107,10:51:2011:107,10:4239,399:-327.589,0,-133.243,-310.082,-132.594,-472.529 0|1:138:73,57,7:73:2828:57,7:2251,283:-160.727,0,-215.127,-159.368,-208.952,-389.557 0|1:73:58,11,4:58:2303:11,4:438,148:-18.1501,0,-186.309,-23.5101,-177.516,-211.904 0|1:90:57,28,4:57:2255:28,4:1114,161:-73.09,0,-177.148,-76.9784,-172.307,-261.359 dDocent_Contig_7563 9 . T G 301.514 . AB=0.197674;ABP=71.2854;AC=1;AF=0.0833333;AN=12;AO=22;CIGAR=1X;DP=1142;DPB=1142;DPRA=0.962387;EPP=50.7827;EPPR=2430.72;GTI=0;LEN=1;MEANALT=1;MQM=56.3182;MQMR=59.6583;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.916816;PAO=0;PQA=0;PQR=0;PRO=0;QA=831;QR=41628;RO=1118;RPL=0;RPP=50.7827;RPPR=2430.72;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=1118;SRP=2430.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:152:152,0:152:5647:0:0:0,-45.7566,-508.086 0/0:241:240,0:240:8861:0:0:0,-72.2472,-796.853 0/0:177:176,0:176:6539:0:0:0,-52.9813,-587.907 0/0:201:201,0:201:7499:0:0:0,-60.507,-674.391 0/0:285:280,5:280:10482:5:194:0,-67.9725,-925.232 0/1:86:69,17:69:2600:17:637:-31.6743,0,-208.311 dDocent_Contig_7564 124 . T C 462.764 . AB=0.0538462;ABP=227.774;AC=0;AF=0;AN=12;AO=7;CIGAR=1X3M1X3M1X;DP=215;DPB=219.111;DPRA=0.928571;EPP=18.2106;EPPR=348.274;GTI=0;LEN=1;MEANALT=4;MQM=27.5714;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0.285714;PAIREDR=0.987421;PAO=4;PQA=145;PQR=0;PRO=0;QA=229;QR=5512;RO=159;RPL=0;RPP=18.2106;RPPR=348.274;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=348.274;SRR=159;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:25:15,2,0,2,4:15:514:2,0,2,4:69,0,70,144:-7.27814,-6.29926,-47.4618,-11.7936,-48.0639,-53.5483,-10.2827,-46.5288,-52.0117,-51.4097,0,-36.3066,-41.7921,-40.2584,-40.5879 0|0:39:25,1,4,0,8:25:885:1,4,0,8:21,140,0,276:-15.0322,-21.4643,-93.3225,-22.0396,-93.0602,-92.9508,-22.5579,-93.6236,-94.1549,-94.7196,0,-71.1966,-71.7348,-72.2918,-69.8835 0|0:27:17,3,2,0,4:17:579:3,2,0,4:108,70,0,146:-6.91003,-8.37524,-54.5169,-11.7718,-55.1462,-58.1969,-12.0275,-55.42,-58.799,-59.0768,0,-43.4803,-46.8606,-47.1359,-45.9317 0|0:50:41,0,1,0,6:41:1436:0,1,0,6:0,35,0,217:-5.43963,-17.7819,-134.671,-14.929,-131.823,-131.522,-17.7819,-134.671,-131.823,-134.671,0,-116.954,-114.106,-116.954,-115.147 0|0:35:34,0,0,0,0:34:1186:0,0,0,0:0,0,0,0:0,-10.235,-106.869,-10.235,-106.869,-106.869,-10.235,-106.869,-106.869,-106.869,-10.235,-106.869,-106.869,-106.869,-106.869 0|0:39:27,1,0,0,10:27:912:1,0,0,10:31,0,0,354:-20.8382,-26.5242,-100.158,-28.9661,-100.459,-102.901,-28.9661,-100.459,-102.901,-102.901,0,-71.6175,-74.0595,-74.0595,-71.0492 dDocent_Contig_7565 49 . A G 124.104 . AB=0.179487;ABP=37.8095;AC=1;AF=0.1;AN=10;AO=7;CIGAR=1X;DP=216;DPB=216;DPRA=0.881356;EPP=18.2106;EPPR=456.848;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=282;QR=8222;RO=209;RPL=0;RPP=18.2106;RPPR=456.848;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=209;SRP=456.848;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:66:66,0:66:2641:0:0:0,-19.868,-237.816 0/0:47:47,0:47:1839:0:0:0,-14.1484,-165.726 0/1:39:32,7:32:1249:7:282:-14.0124,0,-100.94 0/0:31:31,0:31:1189:0:0:0,-9.33193,-107.281 ./.:.:.:.:.:.:.:. 0/0:33:33,0:33:1304:0:0:0,-9.93399,-117.627 dDocent_Contig_7566 31 . C T 190.467 . AB=0.154639;ABP=103.502;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=386;DPB=386;DPRA=0.550201;EPP=39.9253;EPPR=804.284;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.764706;PAIREDR=0.875339;PAO=0;PQA=0;PQR=0;PRO=0;QA=642;QR=14663;RO=369;RPL=0;RPP=39.9253;RPPR=804.284;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=369;SRP=804.284;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:46,8:46:1824:8:290:-10.1857,0,-148.113 0/0:40:38,2:38:1500:2:78:0,-4.63773,-127.83 0/1:43:36,7:36:1414:7:274:-12.0829,0,-114.562 0/0:58:58,0:58:2302:0:0:0,-17.4597,-207.343 0/0:76:76,0:76:3031:0:0:0,-22.8783,-272.872 0/0:115:115,0:115:4592:0:0:0,-34.6184,-413.197 dDocent_Contig_7567 63 . C A 495.22 . AB=0.2;ABP=104.635;AC=3;AF=0.25;AN=12;AO=30;CIGAR=1X;DP=274;DPB=274;DPRA=1.36571;EPP=68.1545;EPPR=532.85;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.7;PAIREDR=0.336066;PAO=0;PQA=0;PQR=0;PRO=0;QA=1193;QR=9728;RO=244;RPL=30;RPP=68.1545;RPPR=532.85;RPR=0;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=244;SRP=532.85;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1377:0:0:0,-10.536,-124.19 0/0:50:47,3:47:1885:3:121:0,-3.77151,-158.573 0/1:41:31,10:31:1228:10:386:-22.7483,0,-98.4491 0/0:59:58,1:58:2327:1:41:0,-13.6662,-205.495 0/1:41:35,6:35:1386:6:245:-10.0872,0,-112.661 0/1:48:38,10:38:1525:10:400:-21.9083,0,-123.045 dDocent_Contig_7568 27 . A G 314.94 . AB=0.186813;ABP=80.539;AC=2;AF=0.166667;AN=12;AO=21;CIGAR=1X;DP=245;DPB=245;DPRA=1.20139;EPP=48.6112;EPPR=489.42;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.428571;PAIREDR=0.491071;PAO=0;PQA=0;PQR=0;PRO=0;QA=845;QR=8842;RO=224;RPL=0;RPP=48.6112;RPPR=489.42;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=224;SRP=489.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:20,4:20:782:4:160:-7.55908,0,-63.4733 0/0:52:50,2:50:1966:2:81:0,-7.96783,-169.459 0/0:30:28,2:28:1131:2:82:0,-1.25122,-94.2915 0/1:67:54,13:54:2148:13:522:-27.1568,0,-173.337 0/0:28:28,0:28:1116:0:0:0,-8.42884,-100.727 0/0:44:44,0:44:1699:0:0:0,-13.2453,-153.145 dDocent_Contig_7569 25 . C G 2922.04 . AB=0.262834;ABP=240.94;AC=5;AF=0.416667;AN=12;AO=128;CIGAR=1X;DP=581;DPB=581;DPRA=1.03617;EPP=280.959;EPPR=986.687;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4961;QR=17676;RO=453;RPL=0;RPP=280.959;RPPR=986.687;RPR=128;RUN=1;SAF=128;SAP=280.959;SAR=0;SRF=453;SRP=986.687;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:44:33,11:33:1292:11:431:-25.9004,0,-103.307 0/1:68:44,24:44:1693:24:933:-63.8108,0,-132.13 0/0:94:94,0:94:3710:0:0:0,-28.2968,-333.952 0/1:189:171,18:171:6678:18:702:-6.61475,0,-543.908 0/1:81:22,59:22:843:59:2252:-178.503,0,-51.8025 0/1:105:89,16:89:3460:16:643:-26.5972,0,-279.866 dDocent_Contig_7570 20 . C T 52.5979 . AB=0.5;ABP=3.0103;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=1X;DP=48;DPB=48;DPRA=0.454545;EPP=7.35324;EPPR=102.898;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=4.33681e-19;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=1765;RO=46;RPL=0;RPP=7.35324;RPPR=102.898;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=46;SRP=102.898;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:4:2,2:2:80:2:81:-6.48161,0,-6.38767 0/0:6:6,0:6:234:0:0:0,-1.80618,-21.4309 0/0:12:12,0:12:444:0:0:0,-3.61236,-40.2944 0/0:7:7,0:7:269:0:0:0,-2.10721,-24.5746 0/0:10:10,0:10:383:0:0:0,-3.0103,-34.822 0/0:9:9,0:9:355:0:0:0,-2.70927,-32.3122 dDocent_Contig_7571 6 . C A 133.47 . AB=0.195652;ABP=40.0197;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=3X;DP=247;DPB=247;DPRA=0.411429;EPP=26.8965;EPPR=511.135;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.818182;PAIREDR=0.991453;PAO=0;PQA=0;PQR=0;PRO=0;QA=400;QR=8901;RO=234;RPL=0;RPP=26.8965;RPPR=511.135;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=234;SRP=511.135;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:24:20,4:20:764:4:146:-6.27299,0,-61.8648 0|0:26:24,2:24:920:2:70:0,-1.17938,-76.4707 0|1:22:17,5:17:645:5:184:-10.2958,0,-51.7608 0|0:35:35,0:35:1327:0:0:0,-10.536,-119.718 0|0:75:75,0:75:2858:0:0:0,-22.5772,-257.403 0|0:65:63,0:63:2387:0:0:0,-18.9649,-214.864 dDocent_Contig_7572 8 . G A 808.479 . AB=0.3875;ABP=11.8048;AC=2;AF=0.2;AN=10;AO=31;CIGAR=1X;DP=182;DPB=182;DPRA=1.17647;EPP=70.3259;EPPR=330.903;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1195;QR=5762;RO=151;RPL=0;RPP=70.3259;RPPR=330.903;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=151;SRP=330.903;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:651:0:0:0,-5.11751,-58.9255 0/1:25:12,13:12:458:13:499:-37.7317,0,-34.0428 0/1:55:37,18:37:1396:18:696:-46.4172,0,-109.36 0/0:48:48,0:48:1862:0:0:0,-14.4494,-167.824 0/0:37:37,0:37:1395:0:0:0,-11.1381,-125.823 ./.:.:.:.:.:.:.:. dDocent_Contig_7574 12 . C T 68.6738 . AB=0.16129;ABP=33.9012;AC=2;AF=0.166667;AN=12;AO=5;CIGAR=2X;DP=81;DPB=81;DPRA=1.24;EPP=13.8677;EPPR=155.131;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0;PAIREDR=0.986486;PAO=0;PQA=0;PQR=0;PRO=0;QA=204;QR=2938;RO=74;RPL=0;RPP=13.8677;RPPR=163.699;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=73;SRP=155.131;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:4:4,0:4:164:0:0:0,-1.20412,-15.1499 0|0:10:10,0:10:385:0:0:0,-3.0103,-35.0018 0|0:13:13,0:13:521:0:0:0,-3.91339,-47.2374 0|1:20:15,3:15:597:3:122:-5.62057,0,-48.3539 0|1:11:9,2:9:361:2:82:-4.46835,0,-29.5431 0|0:23:23,0:23:910:0:0:0,-6.92369,-82.2065 dDocent_Contig_7575 36 . C T 4514.5 . AB=0.308874;ABP=188.942;AC=6;AF=0.5;AN=12;AO=181;CIGAR=1X;DP=586;DPB=586;DPRA=0;EPP=396.047;EPPR=882.457;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.990123;PAO=0;PQA=0;PQR=0;PRO=0;QA=7082;QR=15916;RO=405;RPL=0;RPP=396.047;RPPR=882.457;RPR=181;RUN=1;SAF=181;SAP=396.047;SAR=0;SRF=405;SRP=882.457;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:71:37,34:37:1452:34:1328:-98.4179,0,-109.563 0/1:166:113,53:113:4449:53:2078:-137.247,0,-350.41 0/1:92:69,23:69:2704:23:900:-53.6148,0,-215.811 0/1:142:92,50:92:3604:50:1958:-133.689,0,-281.665 0/1:55:44,11:44:1756:11:438:-23.2189,0,-141.706 0/1:60:50,10:50:1951:10:380:-16.4847,0,-157.735 dDocent_Contig_7576 40 . G C 113.301 . AB=0.163265;ABP=51.2702;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=182;DPB=182;DPRA=0.736842;EPP=20.3821;EPPR=378.675;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.375;PAIREDR=0.578035;PAO=0;PQA=0;PQR=0;PRO=0;QA=318;QR=6785;RO=173;RPL=0;RPP=20.3821;RPPR=378.675;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=173;SRP=378.675;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:37,0:37:1469:0:0:0,-11.1381,-132.466 0/1:33:28,4:28:1102:4:159:-4.67617,0,-89.4585 0/1:16:12,4:12:439:4:159:-9.87564,0,-35.027 0/0:47:47,0:47:1856:0:0:0,-14.1484,-167.261 0/0:25:25,0:25:977:0:0:0,-7.52575,-88.2295 0/0:24:24,0:24:942:0:0:0,-7.22472,-85.0889 dDocent_Contig_7577 20 . T C 4359.48 . AB=0.36129;ABP=54.8174;AC=6;AF=0.5;AN=12;AO=154;CIGAR=1X1M1X;DP=397;DPB=397;DPRA=0;EPP=337.417;EPPR=521.992;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995816;PAO=0;PQA=0;PQR=0;PRO=0;QA=6066;QR=9369;RO=239;RPL=0;RPP=337.417;RPPR=521.992;RPR=154;RUN=1;SAF=154;SAP=337.417;SAR=0;SRF=239;SRP=521.992;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:81:53,26:53:2088:26:1032:-69.0201,0,-163.966 0|1:64:43,21:43:1657:21:821:-54.9412,0,-130.097 0|1:118:72,45:72:2856:45:1763:-123.267,0,-221.522 0|1:47:27,20:27:1054:20:796:-57.8117,0,-80.9971 1|1:39:0,39:0:0:39:1532:-138.13,-11.7402,0 0|0:48:44,3:44:1714:3:122:0,-3.18455,-143.119 dDocent_Contig_7578 24 . T G 209.931 . AB=0.23913;ABP=30.2009;AC=3;AF=0.25;AN=12;AO=12;CIGAR=1X2M;DP=106;DPB=106;DPRA=1.01429;EPP=29.068;EPPR=200.614;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=450;QR=3572;RO=91;RPL=0;RPP=29.068;RPPR=200.614;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=91;SRP=200.614;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:22:22,0,0:22:873:0,0:0,0:0,-6.62266,-78.8816,-6.62266,-78.8816,-78.8816 0|0:13:13,0,0:13:513:0,0:0,0:0,-3.91339,-46.5155,-3.91339,-46.5155,-46.5155 0|1:18:14,0,4:14:559:0,4:0,156:-8.99875,-13.2132,-59.2609,0,-46.4394,-45.2353 0|1:17:8,3,6:8:299:3,6:107,216:-15.2135,-8.90055,-32.4775,0,-15.7669,-22.6783 0|0:25:24,0,1:24:932:0,1:0,39:0,-7.22472,-83.7887,-3.62919,-80.5827,-80.2817 0|1:11:10,0,1:10:396:0,1:0,39:-0.585235,-3.59553,-36.1938,0,-32.9885,-32.6875 dDocent_Contig_7579 47 . T G 11527.2 . AB=0;ABP=0;AC=4;AF=0.333333;AN=12;AO=351;CIGAR=1X;DP=852;DPB=852;DPRA=1.06295;EPP=765.197;EPPR=1073.62;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.988604;PAIREDR=0.996008;PAO=0;PQA=0;PQR=0;PRO=0;QA=13029;QR=18128;RO=501;RPL=0;RPP=765.197;RPPR=1073.62;RPR=351;RUN=1;SAF=351;SAP=765.197;SAR=0;SRF=501;SRP=1090.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:116:116,0:116:4184:0:0:0,-34.9195,-376.717 0/0:161:161,0:161:5780:0:0:0,-48.4658,-520.276 0/0:84:83,1:83:3022:1:39:0,-21.39,-268.295 0/0:136:136,0:136:4957:0:0:0,-40.9401,-446.247 1/1:174:0,174:0:0:174:6464:-581.688,-52.3792,0 1/1:181:5,176:5:185:176:6526:-570.251,-37.4764,0 dDocent_Contig_7580 14 . A T 71.2665 . AB=0.14;ABP=59.2949;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=223;DPB=223;DPRA=1.07042;EPP=35.5824;EPPR=454.677;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=584;QR=8231;RO=208;RPL=0;RPP=35.5824;RPPR=454.677;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=208;SRP=454.677;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:1146:0:0:0,-8.72987,-103.421 0/0:36:33,3:33:1328:3:114:0,-0.206991,-109.15 0/1:32:29,3:29:1143:3:119:-1.46205,0,-93.5185 0/1:18:14,4:14:560:4:152:-8.6286,0,-45.323 0/0:66:61,5:61:2425:5:199:0,-1.57942,-200.119 0/0:42:42,0:42:1629:0:0:0,-12.6433,-146.838 dDocent_Contig_7581 17 . T A 1448.82 . AB=0.141221;ABP=881.81;AC=5;AF=0.416667;AN=12;AO=126;CIGAR=1X3M1X;DP=994;DPB=994;DPRA=0;EPP=276.616;EPPR=1887.85;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.880952;PAIREDR=0.958525;PAO=0;PQA=0;PQR=0;PRO=0;QA=4922;QR=34220;RO=868;RPL=0;RPP=276.616;RPPR=1887.85;RPR=126;RUN=1;SAF=126;SAP=276.616;SAR=0;SRF=868;SRP=1887.85;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:208:193,15:193:7587:15:598:0,-8.45422,-628.361 0|1:216:168,48:168:6626:48:1874:-103.857,0,-531.094 0|1:151:134,17:134:5273:17:676:-15.7149,0,-429.018 0|1:286:261,25:261:10325:25:984:-2.76951,0,-842.564 0|1:85:70,15:70:2759:15:568:-25.8663,0,-222.863 0|1:48:42,6:42:1650:6:222:-5.8838,0,-134.293 dDocent_Contig_7582 9 . G A 279.722 . AB=0.315789;ABP=14.2105;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=326;DPB=326;DPRA=1.34532;EPP=39.9253;EPPR=673.995;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.938511;PAO=0;PQA=0;PQR=0;PRO=0;QA=644;QR=11876;RO=309;RPL=0;RPP=39.9253;RPPR=673.995;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=309;SRP=673.995;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:39,0:39:1511:0:0:0,-11.7402,-136.263 0/0:80:79,1:79:3030:1:39:0,-20.1858,-268.967 0/0:57:57,0:57:2195:0:0:0,-17.1587,-197.775 0/0:43:43,0:43:1637:0:0:0,-12.9443,-147.594 0/1:38:26,12:26:997:12:451:-29.4951,0,-78.6006 0/0:69:65,4:65:2506:4:154:0,-6.53761,-211.505 dDocent_Contig_7583 122 . G A 250.976 . AB=0.18018;ABP=101.626;AC=4;AF=0.333333;AN=12;AO=20;CIGAR=1X;DP=194;DPB=194;DPRA=0.668675;EPP=46.4397;EPPR=380.846;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.816092;PAO=0;PQA=0;PQR=0;PRO=0;QA=701;QR=6018;RO=174;RPL=0;RPP=46.4397;RPPR=380.846;RPR=20;RUN=1;SAF=0;SAP=46.4397;SAR=20;SRF=0;SRP=380.846;SRR=174;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:17:14,3:14:501:3:109:-5.05058,0,-40.3093 0/1:43:33,10:33:1149:10:343:-18.2546,0,-90.771 0/1:32:27,5:27:946:5:181:-7.01026,0,-75.8221 0/1:19:17,2:17:581:2:68:-0.738138,0,-46.8901 0/0:40:40,0:40:1379:0:0:0,-12.0412,-124.406 0/0:43:43,0:43:1462:0:0:0,-12.9443,-131.869 dDocent_Contig_7584 10 . T A 32.3534 . AB=0.121212;ABP=44.1367;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=298;DPB=298;DPRA=0.746544;EPP=13.8677;EPPR=639.252;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.2;PAIREDR=0.467577;PAO=0;PQA=0;PQR=0;PRO=0;QA=200;QR=10885;RO=293;RPL=0;RPP=13.8677;RPPR=639.252;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=293;SRP=639.252;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:42:42,0:42:1543:0:0:0,-12.6433,-139.133 0/0:54:54,0:54:2011:0:0:0,-16.2556,-181.229 0/1:33:29,4:29:1078:4:159:-4.75796,0,-87.3891 0/0:79:79,0:79:2900:0:0:0,-23.7814,-261.184 0/0:48:47,1:47:1777:1:41:0,-10.3549,-156.091 0/0:42:42,0:42:1576:0:0:0,-12.6433,-142.114 dDocent_Contig_7585 111 . C T 3546.48 . AB=0.543478;ABP=7.54207;AC=4;AF=0.4;AN=10;AO=150;CIGAR=1X;DP=283;DPB=283;DPRA=9.85714;EPP=328.731;EPPR=287.473;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0.986667;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4929;QR=4411;RO=131;RPL=0;RPP=328.731;RPPR=287.473;RPR=150;RUN=1;SAF=0;SAP=328.731;SAR=150;SRF=0;SRP=287.473;SRR=131;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:78:29,49:29:934:49:1620:-122.603,0,-60.8758 0/1:100:63,37:63:2167:37:1178:-76.2006,0,-165.201 0/1:54:17,36:17:584:36:1185:-90.914,0,-36.8446 0/1:44:15,28:15:492:28:946:-72.2314,0,-31.377 ./.:.:.:.:.:.:.:. 0/0:7:7,0:7:234:0:0:0,-2.10721,-21.3873 dDocent_Contig_7586 19 . A C 657.078 . AB=0.178404;ABP=194.355;AC=3;AF=0.25;AN=12;AO=46;CIGAR=1X2M1X;DP=387;DPB=387;DPRA=1.37959;EPP=102.898;EPPR=743.482;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.456522;PAIREDR=0.366569;PAO=0;PQA=0;PQR=0;PRO=0;QA=1806;QR=13451;RO=341;RPL=0;RPP=102.898;RPPR=743.482;RPR=46;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=341;SRP=743.482;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:49:49,0:49:1915:0:0:0,-14.7505,-172.566 0|0:74:69,5:69:2716:5:199:0,-3.98786,-226.293 0|1:49:43,6:43:1713:6:240:-7.22556,0,-139.651 0|1:93:74,19:74:2914:19:726:-37.6606,0,-234.393 0|0:51:48,3:48:1906:3:118:0,-4.35033,-160.751 0|1:71:58,13:58:2287:13:523:-26.0435,0,-184.636 dDocent_Contig_7587 107 . N C 149.901 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=156;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:121:-11.1892,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_7588 9 . G A 10296.7 . AB=0.52439;ABP=6.82362;AC=6;AF=0.5;AN=12;AO=387;CIGAR=1X;DP=738;DPB=738;DPRA=0;EPP=843.37;EPPR=756.536;GTI=0;LEN=1;MEANALT=1;MQM=51.2739;MQMR=55.4786;NS=6;NUMALT=1;ODDS=0;PAIRED=0.167959;PAIREDR=0.877493;PAO=0;PQA=0;PQR=0;PRO=0;QA=14166;QR=13331;RO=351;RPL=0;RPP=843.37;RPPR=765.197;RPR=387;RUN=1;SAF=387;SAP=843.37;SAR=0;SRF=350;SRP=756.536;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:90:39,51:39:1476:51:1851:-138.185,0,-96.4431 0/1:140:55,85:55:2064:85:3109:-234.398,0,-128.591 0/1:80:25,55:25:957:55:2025:-156.599,0,-59.3716 0/1:102:54,48:54:2060:48:1748:-122.418,0,-149.461 0/1:159:88,71:88:3355:71:2592:-184.87,0,-253.122 0/1:167:90,77:90:3419:77:2841:-204.422,0,-241.904 dDocent_Contig_7589 36 . C T 12572.4 . AB=0.0320197;ABP=1547.64;AC=0;AF=0;AN=12;AO=26;CIGAR=16M1X4M;DP=1241;DPB=752.476;DPRA=0;EPP=59.4686;EPPR=1420.98;GTI=0;LEN=1;MEANALT=4.75;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.966309;PAO=0;PQA=0;PQR=0;PRO=0;QA=1043;QR=25632;RO=653;RPL=0;RPP=59.4686;RPPR=1420.98;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=653;SRP=1420.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:210:70,135,0:70:2729:135,0:4486,0:-341.806,0,-183.675,-362.878,-224.314,-587.203 0|0:249:113,130,3:113:4433:130,3:4424,122:-324.767,0,-325.41,-348.719,-354.48,-712.398 0|0:219:119,96,0:119:4681:96,0:3242,0:-226.873,0,-356.162,-262.696,-385.061,-647.778 0|0:244:148,90,3:148:5787:90,3:2931,123:-192.003,0,-448.717,-226.401,-465.657,-701.312 0|0:164:93,53,12:93:3665:53,12:1804,471:-118.309,0,-285.584,-107.563,-262.805,-405.51 0|0:155:110,35,8:110:4337:35,8:1205,327:-64.7043,0,-346.277,-70.8231,-329.828,-425.274 dDocent_Contig_7592 11 . T C 266.122 . AB=0.184211;ABP=68.8402;AC=1;AF=0.0833333;AN=12;AO=33;CIGAR=1X2M1X;DP=406;DPB=406;DPRA=0;EPP=74.6689;EPPR=791.255;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997245;PAO=0;PQA=0;PQR=0;PRO=0;QA=1319;QR=13543;RO=363;RPL=0;RPP=74.6689;RPPR=791.255;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=363;SRP=791.255;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:46:43,2:43:1612:2:78:0,-6.3261,-138.046 0|0:70:62,5:62:2336:5:199:0,-2.22091,-192.21 0|0:77:69,6:69:2567:6:240:0,-1.00487,-209.27 0|0:65:62,2:62:2300:2:78:0,-12.2058,-199.846 0|1:76:62,14:62:2320:14:563:-28.135,0,-186.151 0|0:72:65,4:65:2408:4:161:0,-6.2983,-202.071 dDocent_Contig_7593 92 . A G 756.754 . AB=0.145833;ABP=630.566;AC=4;AF=0.333333;AN=12;AO=91;CIGAR=1X;DP=765;DPB=765;DPRA=2.9875;EPP=200.614;EPPR=1462.24;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3039;QR=22691;RO=672;RPL=91;RPP=200.614;RPPR=1462.24;RPR=0;RUN=1;SAF=91;SAP=200.614;SAR=0;SRF=672;SRP=1462.24;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:210:171,39:171:5818:39:1299:-53.9872,0,-460.559 0/1:244:213,30:213:7203:30:1011:-17.7935,0,-574.882 0/1:70:63,7:63:2135:7:241:-0.954168,0,-171.351 0/0:141:134,7:134:4464:7:216:0,-22.7042,-382.218 0/1:52:43,8:43:1426:8:272:-9.11011,0,-112.925 0/0:48:48,0:48:1645:0:0:0,-14.4494,-148.338 dDocent_Contig_7594 186 . A T 147.631 . AB=0.269231;ABP=15.0369;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=1X;DP=93;DPB=93;DPRA=0.776119;EPP=18.2106;EPPR=172.789;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9651;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.895349;PAO=0;PQA=0;PQR=0;PRO=0;QA=278;QR=3383;RO=86;RPL=7;RPP=18.2106;RPPR=189.757;RPR=0;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=2;SRP=172.789;SRR=84;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:17:15,2:15:585:2:80:-2.47407,0,-47.8664 0/0:21:21,0:21:810:0:0:0,-6.32163,-73.2142 0/1:9:4,5:4:152:5:198:-15.4872,0,-11.3372 0/0:20:20,0:20:805:0:0:0,-6.0206,-72.7679 0/0:12:12,0:12:473:0:0:0,-3.61236,-42.9195 0/0:14:14,0:14:558:0:0:0,-4.21442,-50.5633 dDocent_Contig_7595 38 . T G 175.735 . AB=0.35;ABP=6.91895;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=151;DPB=151;DPRA=0.903846;EPP=22.5536;EPPR=309.188;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.957447;PAO=0;PQA=0;PQR=0;PRO=0;QA=351;QR=5514;RO=141;RPL=0;RPP=22.5536;RPPR=309.188;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=141;SRP=309.188;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:475:0:0:0,-3.61236,-43.101 0/0:35:35,0:35:1383:0:0:0,-10.536,-124.733 0/0:27:25,2:25:965:2:76:0,-0.913553,-79.9325 0/0:31:30,0:30:1142:0:0:0,-9.0309,-102.876 0/1:20:13,7:13:512:7:275:-19.0963,0,-40.4064 0/0:26:26,0:26:1037:0:0:0,-7.82678,-93.6273 dDocent_Contig_7596 12 . G A 286.976 . AB=0.165049;ABP=103.383;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1X;DP=323;DPB=323;DPRA=1.57051;EPP=52.9542;EPPR=654.452;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=933;QR=12060;RO=300;RPL=0;RPP=52.9542;RPPR=654.452;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=300;SRP=654.452;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:59,0:59:2355:0:0:0,-17.7608,-212.098 0/0:87:85,2:85:3397:2:82:0,-18.4099,-297.98 0/0:55:51,4:51:2053:4:160:0,-1.77322,-170.163 0/1:50:45,5:45:1815:5:204:-3.69253,0,-148.507 0/1:53:41,12:41:1666:12:487:-28.2254,0,-134.203 0/0:19:19,0:19:774:0:0:0,-5.71957,-69.9784 dDocent_Contig_7597 9 . G T 129.433 . AB=0.166667;ABP=60.9162;AC=3;AF=0.25;AN=12;AO=11;CIGAR=1X;DP=92;DPB=92;DPRA=2.78571;EPP=26.8965;EPPR=178.9;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.727273;PAIREDR=0.950617;PAO=0;PQA=0;PQR=0;PRO=0;QA=422;QR=3045;RO=81;RPL=0;RPP=26.8965;RPPR=178.9;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=81;SRP=178.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:8:8,0:8:308:0:0:0,-2.40824,-28.0822 0/1:18:16,2:16:586:2:78:-1.98493,0,-47.6522 0/0:6:6,0:6:234:0:0:0,-1.80618,-21.4311 0/1:20:15,5:15:582:5:194:-11.8122,0,-46.7025 0/1:22:19,3:19:726:3:117:-4.28772,0,-59.0476 0/0:18:17,1:17:609:1:33:0,-2.1194,-51.8273 dDocent_Contig_7598 7 . T A 162.954 . AB=0.228571;ABP=25.4075;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=212;DPB=212;DPRA=0.965035;EPP=24.725;EPPR=441.648;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.7;PAIREDR=0.490099;PAO=0;PQA=0;PQR=0;PRO=0;QA=389;QR=7675;RO=202;RPL=0;RPP=24.725;RPPR=441.648;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=202;SRP=441.648;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:762:0:0:0,-6.0206,-68.9067 0/0:51:51,0:51:1925:0:0:0,-15.3525,-173.494 0/0:37:37,0:37:1426:0:0:0,-11.1381,-128.619 0/0:35:35,0:35:1333:0:0:0,-10.536,-120.255 0/0:34:32,2:32:1203:2:78:0,-2.83155,-101.164 0/1:35:27,8:27:1026:8:311:-17.8183,0,-82.1119 dDocent_Contig_7599 8 . G T 1892.42 . AB=0.226933;ABP=262.726;AC=3;AF=0.25;AN=12;AO=91;CIGAR=1X;DP=1026;DPB=1026;DPRA=0.6416;EPP=200.614;EPPR=2031.17;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3493;QR=35591;RO=934;RPL=0;RPP=200.614;RPPR=2031.17;RPR=91;RUN=1;SAF=91;SAP=200.614;SAR=0;SRF=934;SRP=2031.17;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:161:117,44:117:4446:44:1692:-104.074,0,-351.742 0/0:71:71,0:71:2735:0:0:0,-21.3731,-246.334 0/1:87:63,24:63:2382:24:920:-56.9263,0,-188.405 0/1:153:129,23:129:4867:23:881:-33.4633,0,-391.929 0/0:321:321,0:321:12272:0:0:0,-96.6306,-1103.97 0/0:233:233,0:233:8889:0:0:0,-70.14,-799.753 dDocent_Contig_7600 88 . T A 1356.91 . AB=0.359116;ABP=34.2147;AC=4;AF=0.333333;AN=12;AO=69;CIGAR=1X;DP=276;DPB=276;DPRA=2.86667;EPP=152.842;EPPR=452.505;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990338;PAO=0;PQA=0;PQR=0;PRO=0;QA=2307;QR=7083;RO=207;RPL=69;RPP=152.842;RPPR=452.505;RPR=0;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=207;SRP=452.505;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:24,17:24:836:17:574:-39.6388,0,-63.2174 0/1:46:25,21:25:868:21:710:-50.3696,0,-64.5905 0/1:54:32,22:32:1063:22:738:-50.4784,0,-79.714 0/0:77:73,4:73:2503:4:128:0,-11.3427,-213.695 0/0:18:18,0:18:622:0:0:0,-5.41854,-56.305 0/1:40:35,5:35:1191:5:157:-2.39849,0,-95.4517 dDocent_Contig_7601 66 . G C 455.017 . AB=0.263158;ABP=40.0396;AC=3;AF=0.25;AN=12;AO=20;CIGAR=1X1M;DP=114;DPB=114;DPRA=2;EPP=46.4397;EPPR=202.786;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=803;QR=3526;RO=92;RPL=20;RPP=46.4397;RPPR=202.786;RPR=0;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=92;SRP=202.786;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:6:6,0,0:6:228:0,0:0,0:0,-1.80618,-20.8807,-1.80618,-20.8807,-20.8807 0|0:16:16,0,0:16:616:0,0:0,0:0,-4.81648,-55.7746,-4.81648,-55.7746,-55.7746 0|1:36:29,0,7:29:1084:0,7:0,281:-14.8255,-23.5553,-112.278,0,-89.1181,-87.0109 0|0:16:16,0,0:16:628:0,0:0,0:0,-4.81648,-56.8568,-4.81648,-56.8568,-56.8568 0|1:27:18,0,9:18:704:0,9:0,363:-24.9065,-30.325,-88.1968,0,-58.2706,-55.5613 0|1:13:7,2,4:7:266:2,4:77,159:-10.9916,-6.78085,-27.9778,0,-15.4829,-20.602 dDocent_Contig_7602 15 . G C 1390.69 . AB=0.34375;ABP=36.9396;AC=6;AF=0.5;AN=12;AO=55;CIGAR=1X;DP=160;DPB=160;DPRA=0;EPP=122.441;EPPR=231.015;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.618182;PAIREDR=0.742857;PAO=0;PQA=0;PQR=0;PRO=0;QA=2181;QR=4120;RO=105;RPL=0;RPP=122.441;RPPR=231.015;RPR=55;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=105;SRP=231.015;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:12,8:12:481:8:320:-23.1462,0,-37.6202 0/1:50:21,29:21:804:29:1142:-88.0046,0,-57.6149 0/1:10:6,4:6:235:4:163:-12.0481,0,-18.5105 0/1:23:16,7:16:605:7:280:-18.647,0,-47.8446 0/1:24:21,3:21:833:3:119:-3.87029,0,-68.058 0/1:33:29,4:29:1162:4:157:-4.57319,0,-94.9254 dDocent_Contig_7603 20 . G C 249.211 . AB=0.184211;ABP=68.8402;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=231;DPB=231;DPRA=0.980645;EPP=33.4109;EPPR=472.048;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.642857;PAIREDR=0.930556;PAO=0;PQA=0;PQR=0;PRO=0;QA=559;QR=8565;RO=216;RPL=0;RPP=33.4109;RPPR=472.048;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=216;SRP=472.048;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:757:0:0:0,-5.71957,-68.4477 0/0:63:63,0:63:2489:0:0:0,-18.9649,-224.159 0/0:49:49,0:49:1922:0:0:0,-14.7505,-173.173 0/0:24:24,0:24:934:0:0:0,-7.22472,-84.359 0/1:35:29,5:29:1170:5:203:-8.08384,0,-95.0187 0/1:41:32,9:32:1293:9:356:-20.0591,0,-104.291 dDocent_Contig_7604 8 . G A 173.752 . AB=0.275862;ABP=15.6647;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=124;DPB=124;DPRA=1.1;EPP=22.5536;EPPR=252.73;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.782609;PAO=0;PQA=0;PQR=0;PRO=0;QA=342;QR=4424;RO=115;RPL=0;RPP=22.5536;RPPR=252.73;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=115;SRP=252.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:6:6,0:6:234:0:0:0,-1.80618,-21.4311 0/0:36:36,0:36:1386:0:0:0,-10.8371,-125.023 0/0:15:14,1:14:543:1:39:0,-0.618885,-45.3194 0/1:29:21,8:21:791:8:303:-18.8979,0,-62.7793 0/0:26:26,0:26:1005:0:0:0,-7.82678,-90.7599 0/0:12:12,0:12:465:0:0:0,-3.61236,-42.202 dDocent_Contig_7605 34 . T C 38.9356 . AB=0.142857;ABP=26.2761;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=137;DPB=137;DPRA=0.905172;EPP=9.52472;EPPR=291.816;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.857143;PAO=0;PQA=0;PQR=0;PRO=0;QA=122;QR=4763;RO=133;RPL=0;RPP=9.52472;RPPR=291.816;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=133;SRP=291.816;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:17,3:17:633:3:122:-5.11535,0,-51.0924 0/0:27:27,0:27:937:0:0:0,-8.12781,-84.637 0/0:24:24,0:24:885:0:0:0,-7.22472,-79.9682 0/0:31:31,0:31:1096:0:0:0,-9.33193,-98.9338 0/0:19:19,0:19:697:0:0:0,-5.71957,-63.0595 0/0:15:15,0:15:515:0:0:0,-4.51545,-46.6674 dDocent_Contig_7607 128 . A T 99.1064 . AB=0.189189;ABP=34.0565;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=204;DPB=204;DPRA=0.980583;EPP=29.068;EPPR=419.933;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8073;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.651042;PAO=0;PQA=0;PQR=0;PRO=0;QA=428;QR=6900;RO=192;RPL=0;RPP=29.068;RPPR=419.933;RPR=12;RUN=1;SAF=0;SAP=29.068;SAR=12;SRF=0;SRP=419.933;SRR=192;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:18,1:18:650:1:37:0,-2.02174,-54.7011 0/1:37:30,7:30:1066:7:247:-11.4331,0,-85.1077 0/0:45:41,4:41:1497:4:144:0,-0.233174,-121.707 0/0:26:26,0:26:881:0:0:0,-7.82678,-79.5888 0/0:42:42,0:42:1523:0:0:0,-12.6433,-137.359 0/0:35:35,0:35:1283:0:0:0,-10.536,-115.772 dDocent_Contig_7608 11 . G C 36.2299 . AB=0.0987654;ABP=116.275;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=442;DPB=442;DPRA=0.86506;EPP=37.7539;EPPR=928.058;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=640;QR=16766;RO=426;RPL=0;RPP=37.7539;RPPR=928.058;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=426;SRP=928.058;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:62:61,1:61:2371:1:41:0,-14.5693,-209.458 0/0:83:83,0:83:3248:0:0:0,-24.9855,-292.403 0/0:57:56,1:56:2202:1:35:0,-13.6601,-194.859 0/1:81:73,8:73:2893:8:324:-5.14576,0,-236.095 0/0:89:87,2:87:3430:2:76:0,-19.5774,-301.548 0/0:70:66,4:66:2622:4:164:0,-5.9222,-220.957 dDocent_Contig_7609 19 . A G 977.168 . AB=0.435897;ABP=5.79424;AC=2;AF=0.166667;AN=12;AO=34;CIGAR=1X;DP=119;DPB=119;DPRA=3.80488;EPP=76.8404;EPPR=187.585;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.941176;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1375;QR=3376;RO=85;RPL=0;RPP=76.8404;RPPR=187.585;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=85;SRP=187.585;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:361:0:0:0,-2.70927,-32.8539 0/0:12:12,0:12:483:0:0:0,-3.61236,-43.8184 0/0:5:5,0:5:197:0:0:0,-1.50515,-18.1053 0/0:15:15,0:15:577:0:0:0,-4.51545,-52.2583 0/1:50:19,31:19:757:31:1252:-97.8961,0,-53.3995 0/1:28:25,3:25:1001:3:123:-3.03595,0,-81.9584 dDocent_Contig_7610 26 . C T 65.8587 . AB=0.105769;ABP=143.404;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=319;DPB=319;DPRA=0.95;EPP=35.5824;EPPR=663.138;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.733333;PAIREDR=0.536184;PAO=0;PQA=0;PQR=0;PRO=0;QA=611;QR=12250;RO=304;RPL=0;RPP=35.5824;RPPR=663.138;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=304;SRP=663.138;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:38,4:38:1530:4:162:-2.3237,0,-125.292 0/0:60:57,3:57:2295:3:123:0,-6.59701,-195.243 0/0:45:44,1:44:1778:1:40:0,-9.55067,-156.233 0/0:59:59,0:59:2368:0:0:0,-17.7608,-213.268 0/1:62:55,7:55:2223:7:286:-7.45096,0,-181.561 0/0:51:51,0:51:2056:0:0:0,-15.3525,-185.222 dDocent_Contig_7611 53 . G C 48.323 . AB=0.142857;ABP=34.0313;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=267;DPB=267;DPRA=0.98324;EPP=13.8677;EPPR=569.765;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.808429;PAO=0;PQA=0;PQR=0;PRO=0;QA=197;QR=9376;RO=261;RPL=5;RPP=13.8677;RPPR=569.765;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=261;SRP=569.765;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:39,0:39:1394:0:0:0,-11.7402,-125.751 0/0:54:54,0:54:1868:0:0:0,-16.2556,-168.371 0/0:41:41,0:41:1518:0:0:0,-12.3422,-136.904 0/0:45:44,0:44:1603:0:0:0,-13.2453,-144.162 0/0:60:59,1:59:2116:1:37:0,-14.364,-186.991 0/1:28:24,4:24:877:4:160:-6.35517,0,-70.8171 dDocent_Contig_7612 8 . G A 6909.3 . AB=0.272487;ABP=512.858;AC=6;AF=0.5;AN=12;AO=309;CIGAR=1X;DP=1134;DPB=1134;DPRA=0;EPP=673.995;EPPR=1636.85;GTI=0;LEN=1;MEANALT=1.33333;MQM=58.4013;MQMR=50.7937;NS=6;NUMALT=1;ODDS=0;PAIRED=0.906149;PAIREDR=0.216117;PAO=0;PQA=0;PQR=0;PRO=0;QA=11743;QR=31284;RO=819;RPL=0;RPP=673.995;RPPR=1781.45;RPR=309;RUN=1;SAF=309;SAP=673.995;SAR=0;SRF=802;SRP=1636.85;SRR=17;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:150:112,38:112:4240:38:1453:-84.7125,0,-321.881 0/1:228:184,44:184:7023:44:1664:-79.6044,0,-539.766 0/1:167:117,50:117:4476:50:1913:-118.059,0,-342.035 0/1:222:174,48:174:6657:48:1824:-94.9835,0,-506.919 0/1:190:126,60:126:4831:60:2272:-144.591,0,-370.441 0/1:177:106,69:106:4057:69:2617:-180.201,0,-298.112 dDocent_Contig_7613 40 . G A 110.099 . AB=0.179487;ABP=37.8095;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=94;DPB=94;DPRA=1.29268;EPP=20.3821;EPPR=187.585;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=321;QR=3345;RO=85;RPL=0;RPP=20.3821;RPPR=187.585;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=85;SRP=187.585;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:13:13,0:13:510:0:0:0,-3.91339,-46.2383 0/0:14:12,1:12:486:1:41:0,-0.0685509,-40.1322 0/0:6:6,0:6:207:0:0:0,-1.80618,-18.9567 0/1:25:22,3:22:858:3:117:-3.38416,0,-70.0033 0/0:22:22,0:22:877:0:0:0,-6.62266,-79.2424 0/1:14:10,4:10:407:4:163:-10.844,0,-32.776 dDocent_Contig_7614 126 . T C 5782.78 . AB=0.707113;ABP=92.0588;AC=7;AF=0.583333;AN=12;AO=196;CIGAR=1X;DP=267;DPB=267;DPRA=0;EPP=428.619;EPPR=157.185;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7348;QR=2609;RO=71;RPL=0;RPP=428.619;RPPR=157.185;RPR=196;RUN=1;SAF=0;SAP=428.619;SAR=196;SRF=0;SRP=157.185;SRR=71;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:28:1,27:1:39:27:1021:-88.2947,-4.53228,0 0/1:112:22,90:22:810:90:3364:-269.188,0,-39.496 0/1:58:17,41:17:640:41:1510:-118.711,0,-40.4692 0/1:52:18,34:18:669:34:1297:-101.364,0,-44.8842 0/1:10:7,3:7:233:3:117:-7.90008,0,-18.2781 0/1:7:6,1:6:218:1:39:-1.78935,0,-17.8603 dDocent_Contig_7616 8 . G C 1240.27 . AB=0.324675;ABP=44.1273;AC=2;AF=0.166667;AN=12;AO=53;CIGAR=1X;DP=377;DPB=377;DPRA=1.03784;EPP=118.098;EPPR=706.567;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.830189;PAIREDR=0.864198;PAO=0;PQA=0;PQR=0;PRO=0;QA=2039;QR=12423;RO=324;RPL=0;RPP=118.098;RPPR=706.567;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=324;SRP=706.567;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:35,3:35:1329:3:117:0,-0.528759,-108.986 0/0:72:72,0:72:2775:0:0:0,-21.6742,-249.928 0/0:48:48,0:48:1843:0:0:0,-14.4494,-166.117 0/0:65:65,0:65:2480:0:0:0,-19.5669,-223.398 0/1:64:42,22:42:1613:22:852:-57.7367,0,-126.17 0/1:90:62,28:62:2383:28:1070:-69.5118,0,-187.585 dDocent_Contig_7617 1 . N G 194.553 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=204;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:163:-15.0584,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_7618 107 . N A 528.989 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=19;CIGAR=1X;DP=19;DPB=19;DPRA=0;EPP=44.2683;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=573;QR=0;RO=0;RPL=0;RPP=44.2683;RPPR=0;RPR=19;RUN=1;SAF=0;SAP=44.2683;SAR=19;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:60:-5.69857,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:13:0,13:0:0:13:413:-37.4753,-3.91339,0 ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:100:-9.24743,-1.20412,0 dDocent_Contig_7619 134 . N G 221.57 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=8.76405;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=242;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:6:0,6:0:0:6:242:-22.1569,-1.80618,0 dDocent_Contig_7623 110 . A T 1539.54 . AB=0.235897;ABP=239.289;AC=2;AF=0.166667;AN=12;AO=92;CIGAR=1X;DP=474;DPB=474;DPRA=9.28571;EPP=202.786;EPPR=830.341;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3042;QR=12373;RO=381;RPL=0;RPP=202.786;RPPR=830.341;RPR=92;RUN=1;SAF=0;SAP=202.786;SAR=92;SRF=0;SRP=830.341;SRR=381;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:858:0:0:0,-7.82678,-77.5251 0/0:29:29,0:29:957:0:0:0,-8.72987,-86.4323 0/0:5:5,0:5:157:0:0:0,-1.50515,-14.4401 0/0:24:24,0:24:791:0:0:0,-7.22472,-71.4969 0/1:204:171,33:171:5499:33:1116:-39.3333,0,-433.662 0/1:186:126,59:126:4111:59:1926:-117.842,0,-314.433 dDocent_Contig_7624 16 . T C 16139.3 . AB=0.509934;ABP=3.91628;AC=6;AF=0.5;AN=12;AO=539;CIGAR=1X;DP=1057;DPB=1057;DPRA=0;EPP=1173.43;EPPR=1125.66;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.715667;PAO=0;PQA=0;PQR=0;PRO=0;QA=21591;QR=20815;RO=517;RPL=0;RPP=1173.43;RPPR=1125.66;RPR=539;RUN=1;SAF=539;SAP=1173.43;SAR=0;SRF=517;SRP=1125.66;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:110:35,75:35:1387:75:3045:-241.003,0,-91.9731 0/1:103:70,33:70:2836:33:1316:-87.6945,0,-224.325 0/1:139:82,56:82:3295:56:2236:-159.605,0,-254.804 0/1:97:55,42:55:2216:42:1696:-123.658,0,-170.402 0/1:315:136,179:136:5477:179:7098:-543.657,0,-397.917 0/1:293:139,154:139:5604:154:6200:-469.538,0,-415.946 dDocent_Contig_7625 53 . C T 286.668 . AB=0.0724638;ABP=112.56;AC=6;AF=0.5;AN=12;AO=5;CIGAR=1X4M;DP=163;DPB=163;DPRA=0;EPP=13.8677;EPPR=291.816;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.887218;PAO=0;PQA=0;PQR=0;PRO=0;QA=154;QR=5202;RO=133;RPL=5;RPP=13.8677;RPPR=291.816;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=133;SRP=291.816;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:33:28,1,4:28:1074:1,4:39,120:-1.09112,-6.29613,-94.2131,0,-84.9328,-86.9347 0|1:36:27,7,1:27:1071:7,1:258,34:-13.091,0,-86.228,-18.46,-85.5788,-106.37 0|1:16:14,2,0:14:563:2,0:75,0:-2.30386,0,-46.1971,-6.51828,-46.7992,-52.9394 0|1:31:27,4,0:27:1044:4,0:154,0:-4.90166,0,-84.9166,-13.0295,-86.1208,-98.7653 0|1:23:19,4,0:19:750:4,0:157,0:-7.58511,0,-60.9011,-13.3047,-62.1052,-75.0174 0|1:24:18,5,0:18:700:5,0:188,0:-9.96422,0,-56.0023,-15.3828,-57.5075,-72.9073 dDocent_Contig_7626 19 . T A 209.977 . AB=0.127517;ABP=182.572;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1X;DP=900;DPB=900;DPRA=0.992011;EPP=44.2683;EPPR=1916.08;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.7684;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99319;PAO=0;PQA=0;PQR=0;PRO=0;QA=745;QR=35270;RO=881;RPL=0;RPP=44.2683;RPPR=1916.08;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=881;SRP=1916.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:152:152,0:152:6128:0:0:0,-45.7566,-550.248 0/0:263:263,0:263:10569:0:0:0,-79.1709,-946.337 0/0:159:159,0:159:6349:0:0:0,-47.8638,-569.477 0/0:158:158,0:158:6277:0:0:0,-47.5627,-563.565 0/0:19:19,0:19:769:0:0:0,-5.71957,-69.5306 0/1:149:130,19:130:5178:19:745:-22.5206,0,-421.024 dDocent_Contig_7627 18 . C A 41.1197 . AB=0.129032;ABP=40.0654;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=263;DPB=263;DPRA=0.668103;EPP=11.6962;EPPR=565.422;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.362934;PAO=0;PQA=0;PQR=0;PRO=0;QA=162;QR=10326;RO=259;RPL=0;RPP=11.6962;RPPR=565.422;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=259;SRP=565.422;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:1025:0:0:0,-7.82678,-92.5436 0/0:73:73,0:73:2908:0:0:0,-21.9752,-261.816 0/1:31:27,4:27:1061:4:162:-5.63482,0,-86.4377 0/0:48:48,0:48:1909:0:0:0,-14.4494,-172.01 0/0:48:48,0:48:1930:0:0:0,-14.4494,-173.891 0/0:37:37,0:37:1493:0:0:0,-11.1381,-134.612 dDocent_Contig_7628 62 . T A 2559.13 . AB=0.268409;ABP=199.139;AC=6;AF=0.5;AN=12;AO=113;CIGAR=1X;DP=421;DPB=421;DPRA=0;EPP=248.387;EPPR=671.824;GTI=0;LEN=1;MEANALT=1;MQM=56.1858;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4365;QR=12215;RO=308;RPL=113;RPP=248.387;RPPR=671.824;RPR=0;RUN=1;SAF=113;SAP=248.387;SAR=0;SRF=308;SRP=671.824;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:19,14:19:727:14:529:-37.9204,0,-55.8267 0/1:56:32,24:32:1246:24:889:-63.3036,0,-95.5728 0/1:41:30,11:30:1215:11:429:-26.5524,0,-97.2787 0/1:67:42,25:42:1681:25:991:-68.8913,0,-131.348 0/1:129:112,17:112:4445:17:654:-20.3377,0,-361.174 0/1:95:73,22:73:2901:22:873:-50.1293,0,-232.602 dDocent_Contig_7629 12 . C T 5683.91 . AB=0.326316;ABP=177.254;AC=6;AF=0.5;AN=12;AO=217;CIGAR=1X;DP=665;DPB=665;DPRA=0;EPP=474.22;EPPR=975.83;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.953917;PAIREDR=0.966518;PAO=0;PQA=0;PQR=0;PRO=0;QA=8648;QR=18007;RO=448;RPL=0;RPP=474.22;RPPR=975.83;RPR=217;RUN=1;SAF=217;SAP=474.22;SAR=0;SRF=448;SRP=975.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:90:50,40:50:1995:40:1585:-115.792,0,-152.639 0/1:111:69,42:69:2779:42:1687:-118.637,0,-216.793 0/1:72:45,27:45:1820:27:1086:-76.3511,0,-142.331 0/1:123:58,65:58:2349:65:2557:-193.222,0,-174.528 0/1:134:112,22:112:4515:22:883:-39.4382,0,-365.92 0/1:135:114,21:114:4549:21:850:-36.1719,0,-368.681 dDocent_Contig_7631 54 . A T 301.638 . AB=0.25;ABP=33.4109;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=136;DPB=136;DPRA=1.4;EPP=33.4109;EPPR=265.758;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.285714;PAIREDR=0.528926;PAO=0;PQA=0;PQR=0;PRO=0;QA=550;QR=4762;RO=121;RPL=14;RPP=33.4109;RPPR=265.758;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=121;SRP=265.758;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:19,11:19:743:11:431:-30.1133,0,-58.1599 0/0:28:28,0:28:1110:0:0:0,-8.42884,-100.183 0/0:5:5,0:5:190:0:0:0,-1.50515,-17.4638 0/0:27:27,0:27:1042:0:0:0,-8.12781,-94.0784 0/0:20:19,0:19:757:0:0:0,-5.71957,-68.3774 0/1:26:23,3:23:920:3:119:-3.2684,0,-75.2778 dDocent_Contig_7632 89 . G C 72.1465 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=9;CIGAR=2X;DP=412;DPB=412;DPRA=1.31044;EPP=22.5536;EPPR=836.856;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.555556;PAIREDR=0.471354;PAO=0;PQA=0;PQR=0;PRO=0;QA=315;QR=12929;RO=384;RPL=9;RPP=22.5536;RPPR=836.856;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=384;SRP=836.856;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:54:53,0,1:53:1763:0,1:0,35:0,-15.9546,-158.6,-12.757,-155.752,-155.451 0|0:83:79,4,0:79:2669:4,0:140,0:0,-12.0406,-227.522,-23.7814,-228.726,-240.117 0|0:59:54,0,5:54:1839:0,5:0,166:0,-16.2556,-165.46,-2.49432,-152.032,-150.526 0|0:76:68,5,3:68:2285:5,3:175,108:0,-6.23777,-189.823,-11.654,-182.515,-195.851 0|0:71:61,0,10:61:2033:0,10:0,331:-8.73753,-27.1004,-191.652,0,-164.883,-161.872 0|0:69:69,0,0:69:2340:0,0:0,0:0,-20.7711,-210.868,-20.7711,-210.868,-210.868 dDocent_Contig_7633 66 . G A 163.204 . AB=0.196078;ABP=43.9277;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=230;DPB=230;DPRA=1.42458;EPP=24.725;EPPR=480.734;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.822727;PAO=0;PQA=0;PQR=0;PRO=0;QA=365;QR=7821;RO=220;RPL=5;RPP=3.0103;RPPR=3.04978;RPR=5;RUN=1;SAF=5;SAP=3.0103;SAR=5;SRF=109;SRP=3.04978;SRR=111;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1087:0:0:0,-9.0309,-98.1361 0/0:27:27,0:27:961:0:0:0,-8.12781,-86.7945 0/0:45:45,0:45:1584:0:0:0,-13.5463,-142.832 0/1:51:41,10:41:1502:10:365:-17.8433,0,-120.11 0/0:50:50,0:50:1750:0:0:0,-15.0515,-157.769 0/0:27:27,0:27:937:0:0:0,-8.12781,-84.6333 dDocent_Contig_7634 72 . A T 152.453 . AB=0.875;ABP=12.7819;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=136;DPB=136;DPRA=0.3125;EPP=18.2106;EPPR=280.959;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.945312;PAO=0;PQA=0;PQR=0;PRO=0;QA=204;QR=4630;RO=128;RPL=7;RPP=18.2106;RPPR=280.959;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=128;SRP=280.959;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:845:0:0:0,-7.22472,-76.3673 0/0:38:38,0:38:1362:0:0:0,-11.4391,-122.876 0/0:29:29,0:29:1061:0:0:0,-8.72987,-95.787 0/0:28:27,0:27:981:0:0:0,-8.12781,-88.525 0/0:9:9,0:9:342:0:0:0,-2.70927,-31.1368 0/1:8:1,7:1:39:7:204:-16.2348,0,-1.48832 dDocent_Contig_7635 8 . G A 7358.34 . AB=0.368758;ABP=119.856;AC=4;AF=0.333333;AN=12;AO=289;CIGAR=1X;DP=909;DPB=909;DPRA=3.23019;EPP=630.566;EPPR=1349.32;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10899;QR=23571;RO=620;RPL=0;RPP=630.566;RPPR=1349.32;RPR=289;RUN=1;SAF=289;SAP=630.566;SAR=0;SRF=620;SRP=1349.32;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:144:104,40:104:3936:40:1462:-88.5056,0,-310.997 0/1:257:131,126:131:4985:126:4754:-350.548,0,-371.314 0/1:184:126,58:126:4802:58:2216:-144.273,0,-376.827 0/1:196:132,64:132:5000:64:2428:-159.729,0,-391.026 0/0:53:53,0:53:2031:0:0:0,-15.9546,-183.026 0/0:75:74,1:74:2817:1:39:0,-18.6807,-249.812 dDocent_Contig_7637 97 . T G 52.5366 . AB=0.175;ABP=39.7082;AC=3;AF=0.25;AN=12;AO=9;CIGAR=1X;DP=166;DPB=166;DPRA=1.38095;EPP=22.5536;EPPR=341.76;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.967949;PAO=0;PQA=0;PQR=0;PRO=0;QA=308;QR=5471;RO=156;RPL=9;RPP=22.5536;RPPR=341.76;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=156;SRP=341.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:14:12,2:12:417:2:69:-2.33824,0,-33.6481 0/0:16:15,1:15:529:1:34:0,-1.41757,-44.5436 0/1:6:3,2:3:100:2:69:-4.69931,0,-7.47927 0/0:21:21,0:21:731:0:0:0,-6.32163,-66.111 0/0:89:88,1:88:3099:1:35:0,-23.293,-275.643 0/1:20:17,3:17:595:3:101:-3.40313,0,-47.8573 dDocent_Contig_7638 83 . G A 68.0473 . AB=0.25;ABP=13.8677;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=105;DPB=105;DPRA=1.33333;EPP=16.0391;EPPR=217.986;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=189;QR=3252;RO=99;RPL=6;RPP=16.0391;RPPR=217.986;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=99;SRP=217.986;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:278:0:0:0,-2.70927,-25.3209 0/1:20:15,5:15:509:5:156:-8.3276,0,-40.113 0/0:7:7,0:7:233:0:0:0,-2.10721,-21.2963 0/0:22:21,1:21:671:1:33:0,-3.32352,-57.3941 0/0:25:25,0:25:820:0:0:0,-7.52575,-74.1022 0/0:22:22,0:22:741:0:0:0,-6.62266,-67.0031 dDocent_Contig_7640 162 . A G 248.576 . AB=0.164948;ABP=97.5925;AC=3;AF=0.25;AN=12;AO=18;CIGAR=1X;DP=196;DPB=196;DPRA=1.05556;EPP=42.0968;EPPR=389.532;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.713483;PAO=0;PQA=0;PQR=0;PRO=0;QA=728;QR=7111;RO=178;RPL=18;RPP=42.0968;RPPR=389.532;RPR=0;RUN=1;SAF=0;SAP=42.0968;SAR=18;SRF=0;SRP=389.532;SRR=178;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:29:24,5:24:952:5:205:-10.1051,0,-77.2457 0/0:34:34,0:34:1330:0:0:0,-10.235,-119.965 0/1:40:35,5:35:1424:5:197:-6.06432,0,-116.364 0/1:28:22,6:22:880:6:244:-13.91,0,-71.0791 0/0:29:29,0:29:1162:0:0:0,-8.72987,-104.86 0/0:36:34,2:34:1363:2:82:0,-3.0574,-115.15 dDocent_Contig_7641 12 . C G 360.207 . AB=0.262295;ABP=32.9481;AC=2;AF=0.166667;AN=12;AO=26;CIGAR=1X;DP=274;DPB=274;DPRA=1.05682;EPP=59.4686;EPPR=539.364;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.40081;PAO=0;PQA=0;PQR=0;PRO=0;QA=1025;QR=9796;RO=247;RPL=0;RPP=59.4686;RPPR=539.364;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=247;SRP=539.364;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:28,6:28:1105:6:230:-10.8297,0,-89.4948 0/0:70:63,6:63:2516:6:230:0,-0.113227,-205.512 0/1:27:17,10:17:677:10:402:-28.4123,0,-53.1321 0/0:55:51,4:51:2004:4:163:0,-1.49822,-165.501 0/0:55:55,0:55:2192:0:0:0,-16.5566,-197.448 0/0:33:33,0:33:1302:0:0:0,-9.93399,-117.441 dDocent_Contig_7642 14 . C G 9058.48 . AB=0.609091;ABP=25.7515;AC=4;AF=0.333333;AN=12;AO=274;CIGAR=1X;DP=429;DPB=429;DPRA=5.21739;EPP=597.994;EPPR=339.589;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.981752;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10813;QR=6141;RO=155;RPL=0;RPP=597.994;RPPR=339.589;RPR=274;RUN=1;SAF=274;SAP=597.994;SAR=0;SRF=155;SRP=339.589;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1325:0:0:0,-9.93399,-119.513 0/0:16:16,0:16:632:0:0:0,-4.81648,-57.215 0/1:81:74,7:74:2932:7:276:-0.820657,0,-239.594 0/0:20:20,0:20:778:0:0:0,-6.0206,-70.3325 0/1:139:12,127:12:474:127:5073:-414.595,0,-1.16364 1/1:140:0,140:0:0:140:5464:-491.623,-42.1442,0 dDocent_Contig_7643 8 . G A 714.236 . AB=0.115684;ABP=1156.33;AC=5;AF=0.416667;AN=12;AO=115;CIGAR=1X;DP=1033;DPB=1033;DPRA=0;EPP=252.73;EPPR=1963.89;GTI=0;LEN=1;MEANALT=1.5;MQM=57.4957;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.930435;PAIREDR=0.962678;PAO=0;PQA=0;PQR=0;PRO=0;QA=4396;QR=34673;RO=911;RPL=0;RPP=252.73;RPPR=1981.22;RPR=115;RUN=1;SAF=115;SAP=252.73;SAR=0;SRF=909;SRP=1963.89;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:134:121,11:121:4644:11:410:0,-2.87592,-380.752 0/1:230:200,29:200:7557:29:1103:-30.2454,0,-610.646 0/1:176:157,19:157:6002:19:733:-13.319,0,-487.144 0/1:165:143,18:143:5464:18:684:-11.6776,0,-442.898 0/1:195:174,21:174:6580:21:809:-7.34096,0,-533.415 0/1:133:116,17:116:4426:17:657:-18.0625,0,-358.363 dDocent_Contig_7644 69 . C A 70.2387 . AB=0.428571;ABP=3.32051;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=151;DPB=151;DPRA=0.243056;EPP=9.52472;EPPR=324.388;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.972973;PAO=0;PQA=0;PQR=0;PRO=0;QA=111;QR=5698;RO=148;RPL=3;RPP=9.52472;RPPR=324.388;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=148;SRP=324.388;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:7:4,3:4:156:3:111:-8.24571,0,-12.3083 0/0:18:18,0:18:725:0:0:0,-5.41854,-65.5763 0/0:24:24,0:24:893:0:0:0,-7.22472,-80.6672 0/0:11:11,0:11:418:0:0:0,-3.31133,-37.9622 0/0:46:46,0:46:1796:0:0:0,-13.8474,-161.872 0/0:45:45,0:45:1710:0:0:0,-13.5463,-154.123 dDocent_Contig_7645 75 . G T 906.699 . AB=0.909091;ABP=50.9801;AC=1;AF=0.0833333;AN=12;AO=49;CIGAR=1X;DP=720;DPB=720;DPRA=0.809091;EPP=109.412;EPPR=1460.07;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1852;QR=24561;RO=671;RPL=49;RPP=109.412;RPPR=1460.07;RPR=0;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=671;SRP=1460.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:114:113,1:113:4035:1:37:0,-30.6196,-359.617 0/0:181:181,0:181:6474:0:0:0,-54.4864,-582.719 0/0:94:94,0:94:3498:0:0:0,-28.2968,-314.954 0/0:188:177,11:177:6559:11:423:0,-18.1701,-551.835 0/1:33:3,30:3:116:30:1119:-91.071,0,-0.883714 0/0:110:103,7:103:3879:7:273:0,-8.17529,-324.287 dDocent_Contig_7646 144 . N G 77.8076 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_7647 49 . G T 164.681 . AB=0.137931;ABP=102.074;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=373;DPB=373;DPRA=1.62676;EPP=35.5824;EPPR=406.759;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.553073;PAO=0;PQA=0;PQR=0;PRO=0;QA=609;QR=14063;RO=358;RPL=0;RPP=35.5824;RPPR=406.759;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=358;SRP=780.397;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:38,0:38:1494:0:0:0,-11.4391,-134.706 0/0:61:61,0:61:2388:0:0:0,-18.3628,-215.089 0/0:43:43,0:43:1685:0:0:0,-12.9443,-151.876 0/0:55:53,2:53:2084:2:81:0,-8.87092,-180.068 0/1:87:75,12:75:2973:12:487:-17.991,0,-241.479 0/0:89:88,1:88:3439:1:41:0,-22.6971,-305.473 dDocent_Contig_7650 9 . C T 11849.7 . AB=0.0942029;ABP=200.394;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X7M1X7M;DP=702;DPB=681.938;DPRA=0;EPP=31.2394;EPPR=118.098;GTI=0;LEN=1;MEANALT=14;MQM=60;MQMR=60;NS=6;NUMALT=7;ODDS=0;PAIRED=0;PAIREDR=0.962264;PAO=0;PQA=0;PQR=0;PRO=0;QA=483;QR=2066;RO=53;RPL=0;RPP=31.2394;RPPR=118.098;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=53;SRP=118.098;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:87:7,0,10,4,0,1,50,8:7:275:0,10,4,0,1,50,8:0,375,152,0,33,1819,314:-154.533,-156.641,-179.262,-125.924,-148.546,-145.535,-144.174,-166.796,-136.079,-165.591,-156.641,-179.262,-148.546,-166.796,-179.262,-153.973,-176.594,-145.878,-164.128,-176.594,-176.293,-8.09111,-30.7131,0,-18.2475,-30.7131,-28.0463,-15.6616,-130.813,-153.435,-122.718,-140.968,-153.435,-150.767,-4.88514,-151.026 1|0:191:14,0,13,21,0,2,117,2:14:534:0,13,21,0,2,117,2:0,484,791,0,73,4336,80:-371.547,-375.761,-419.566,-336.15,-379.954,-376.041,-310.945,-354.749,-315.137,-348.427,-375.761,-419.566,-379.954,-354.749,-419.566,-369.797,-413.602,-373.99,-348.785,-413.602,-413,-21.0117,-64.817,-25.2058,0,-64.817,-58.8534,-29.5965,-369.171,-412.975,-373.364,-348.159,-412.975,-407.012,-58.2263,-412.373 0|0:88:5,0,16,14,0,7,34,7:5:200:0,16,14,0,7,34,7:0,616,525,0,258,1273,283:-136.847,-138.352,-154.829,-87.7736,-104.251,-99.4342,-95.3493,-111.826,-61.2481,-107.612,-138.352,-154.829,-104.251,-111.826,-154.829,-117.255,-133.732,-83.1543,-90.7299,-133.732,-131.625,-34.1005,-50.5777,0,-7.577,-50.5777,-29.4824,-40.3427,-115.017,-131.494,-80.9153,-88.491,-131.494,-110.397,-27.2419,-129.387 1|0:86:0,0,16,19,0,0,36,9:0:0:0,16,19,0,0,36,9:0,615,726,0,0,1337,336:-168.982,-168.982,-168.982,-118.491,-118.491,-113.674,-109.411,-109.411,-58.9188,-103.692,-168.982,-168.982,-118.491,-109.411,-168.982,-168.982,-168.982,-118.491,-109.411,-168.982,-168.982,-59.5716,-59.5716,-9.07914,0,-59.5716,-59.5716,-48.7345,-141.481,-141.481,-90.9896,-81.9103,-141.481,-141.481,-32.0714,-138.772 0|0:138:18,19,1,0,13,0,21,47:18:698:19,1,0,13,0,21,47:718,40,0,483,0,762,1859:-152.449,-100.537,-152.16,-154.573,-154.584,-211.615,-157.868,-157.879,-211.916,-215.211,-118.344,-118.356,-172.391,-175.687,-171.773,-157.868,-157.879,-211.916,-215.211,-175.687,-215.211,-95.656,-95.6683,-149.703,-152.999,-113.475,-152.999,-146.677,-4.86667,-4.8801,-58.9168,-62.2122,-22.6875,-62.2122,0,-48.0638 0|0:112:9,8,0,0,0,1,26,53:9:359:8,0,0,0,1,26,53:311,0,0,0,40,955,2024:-211.831,-189.535,-216.695,-214.54,-219.103,-244.108,-214.54,-219.103,-244.108,-244.108,-214.54,-219.103,-244.108,-244.108,-244.108,-211.245,-215.808,-240.813,-240.813,-240.813,-240.512,-136.475,-141.039,-166.044,-166.044,-166.044,-162.748,-158.217,-48.4921,-53.0572,-78.0632,-78.0632,-78.0632,-74.7677,0,-62.1086 dDocent_Contig_7651 12 . T C 191.752 . AB=0.084507;ABP=109.474;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X1M;DP=191;DPB=191;DPRA=1.44898;EPP=26.8965;EPPR=354.789;GTI=0;LEN=1;MEANALT=2.25;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.636364;PAIREDR=0.790123;PAO=0;PQA=0;PQR=0;PRO=0;QA=445;QR=6447;RO=162;RPL=0;RPP=26.8965;RPPR=354.789;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=162;SRP=354.789;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:43:40,0,0,3:40:1594:0,0,3:0,0,123:0,-12.0412,-143.292,-12.0412,-143.292,-143.292,-1.4795,-133.139,-133.139,-132.236 0|1:29:22,4,0,3:22:882:4,0,3:163,0,122:-6.82513,0,-71.4567,-13.4478,-72.6609,-86.109,-3.3849,-62.5969,-76.0453,-75.1422 0|0:18:18,0,0,0:18:723:0,0,0:0,0,0:0,-5.41854,-65.3966,-5.41854,-65.3966,-65.3966,-5.41854,-65.3966,-65.3966,-65.3966 0|0:31:31,0,0,0:31:1229:0,0,0:0,0,0:0,-9.33193,-110.885,-9.33193,-110.885,-110.885,-9.33193,-110.885,-110.885,-110.885 0|0:28:24,1,1,2:24:940:1,1,2:41,41,79:0,-3.83817,-80.8206,-3.83817,-77.7368,-80.8206,-0.731183,-74.6204,-74.6204,-77.4031 0|0:42:27,5,7,3:27:1079:5,7,3:188,287,121:-15.5718,-8.31188,-95.6765,0,-73.4912,-86.7789,-13.7238,-87.2073,-78.9113,-101.699 dDocent_Contig_7652 92 . T G 870.084 . AB=0.348214;ABP=25.423;AC=2;AF=0.166667;AN=12;AO=45;CIGAR=1X;DP=334;DPB=334;DPRA=1.41954;EPP=100.727;EPPR=630.566;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.986159;PAO=0;PQA=0;PQR=0;PRO=0;QA=1587;QR=10152;RO=289;RPL=45;RPP=100.727;RPPR=630.566;RPR=0;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=289;SRP=630.566;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:59:38,21:38:1293:21:723:-47.6236,0,-98.9018 0/0:66:63,3:63:2203:3:106:0,-9.97888,-188.644 0/0:69:66,3:66:2364:3:111:0,-10.4171,-202.654 0/1:53:35,18:35:1252:18:647:-42.6067,0,-97.0273 0/0:41:41,0:41:1405:0:0:0,-12.3422,-126.738 0/0:46:46,0:46:1635:0:0:0,-13.8474,-147.434 dDocent_Contig_7653 34 . C T 115.95 . AB=0.153846;ABP=57.1301;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=163;DPB=163;DPRA=1.31111;EPP=24.725;EPPR=244.444;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.572368;PAO=0;PQA=0;PQR=0;PRO=0;QA=406;QR=5930;RO=152;RPL=0;RPP=24.725;RPPR=333.074;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=141;SRP=244.444;SRR=11;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:27,1:27:1042:1:41:0,-4.33427,-89.9764 0/0:38:37,1:37:1436:1:41:0,-7.34457,-125.398 0/1:22:20,2:20:764:2:81:-1.06307,0,-62.4581 0/1:30:23,6:23:893:6:243:-13.1096,0,-71.5309 0/0:27:27,0:27:1081:0:0:0,-8.12781,-97.5773 0/0:18:18,0:18:714:0:0:0,-5.41854,-64.5819 dDocent_Contig_7654 39 . T C 121.141 . AB=0.206897;ABP=24.6501;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=221;DPB=221;DPRA=0.755208;EPP=16.0391;EPPR=469.877;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.534884;PAO=0;PQA=0;PQR=0;PRO=0;QA=241;QR=7840;RO=215;RPL=0;RPP=16.0391;RPPR=469.877;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=215;SRP=469.877;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:29:23,6:23:825:6:241:-13.3359,0,-65.8287 0/0:43:43,0:43:1570:0:0:0,-12.9443,-141.57 0/0:40:40,0:40:1484:0:0:0,-12.0412,-133.838 0/0:45:45,0:45:1625:0:0:0,-13.5463,-146.514 0/0:30:30,0:30:1109:0:0:0,-9.0309,-100.109 0/0:34:34,0:34:1227:0:0:0,-10.235,-110.724 dDocent_Contig_7655 9 . C T 1170.13 . AB=0.164634;ABP=483.647;AC=5;AF=0.416667;AN=12;AO=82;CIGAR=1X;DP=526;DPB=526;DPRA=0;EPP=181.071;EPPR=967.144;GTI=0;LEN=1;MEANALT=1;MQM=59.8537;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.987805;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3067;QR=17021;RO=444;RPL=0;RPP=181.071;RPPR=967.144;RPR=82;RUN=1;SAF=82;SAP=181.071;SAR=0;SRF=444;SRP=967.144;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:33,1:33:1261:1:37:0,-6.53719,-110.081 0/1:83:71,12:71:2692:12:436:-14.5926,0,-217.479 0/1:72:52,20:52:2001:20:747:-45.8795,0,-158.651 0/1:60:53,7:53:2032:7:261:-5.78446,0,-165.052 0/1:147:123,24:123:4763:24:898:-36.8588,0,-384.443 0/1:130:112,18:112:4272:18:688:-23.1199,0,-345.414 dDocent_Contig_7657 86 . A T 82.8816 . AB=0.122137;ABP=165.473;AC=3;AF=0.25;AN=12;AO=18;CIGAR=1X;DP=267;DPB=267;DPRA=0.935484;EPP=42.0968;EPPR=543.707;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.777778;PAIREDR=0.562249;PAO=0;PQA=0;PQR=0;PRO=0;QA=642;QR=8770;RO=249;RPL=18;RPP=42.0968;RPPR=543.707;RPR=0;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=249;SRP=543.707;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:43:41,2:41:1455:2:72:0,-6.10757,-124.41 0/1:61:55,6:55:1940:6:216:-1.42768,0,-156.514 0/1:22:19,3:19:696:3:111:-3.73126,0,-56.349 0/1:48:41,7:41:1438:7:243:-7.75851,0,-115.261 0/0:48:48,0:48:1660:0:0:0,-14.4494,-149.682 0/0:45:45,0:45:1581:0:0:0,-13.5463,-142.581 dDocent_Contig_7660 12 . A G 43433.9 . AB=0.305758;ABP=811.161;AC=10;AF=0.833333;AN=12;AO=754;CIGAR=1X3M;DP=2466;DPB=2466;DPRA=0;EPP=1640.3;EPPR=971.487;GTI=0;LEN=1;MEANALT=5.83333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.432361;PAIREDR=0.526906;PAO=0;PQA=0;PQR=0;PRO=0;QA=29925;QR=17615;RO=446;RPL=0;RPP=1640.3;RPPR=971.487;RPR=754;RUN=1;SAF=754;SAP=1640.3;SAR=0;SRF=446;SRP=971.487;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:411:55,230,10,111:55:2191:230,10,111:9055,381,4430:-892.156,-184.421,-295.603,-877.646,-333.774,-1055.06,-543.87,0,-693.224,-690.877 1|1:666:99,286,69,198:99:3904:286,69,198:11190,2666,7803:-1185.22,-320.697,-555.792,-999.067,-425.931,-1299.49,-573.137,0,-678.37,-834.724 1|1:292:37,136,20,94:37:1466:136,20,94:5353,773,3750:-597.123,-188.162,-267.884,-546.015,-246.58,-660.658,-299.434,0,-357.853,-391.803 1|1:450:54,252,16,119:54:2149:252,16,119:9802,624,4740:-983.186,-213.348,-314.436,-949.96,-340.816,-1122.09,-609.144,0,-736.612,-750.271 0|1:309:102,77,14,108:102:4010:77,14,108:2997,535,4304:-323.715,-112.078,-418.711,-310.915,-398.386,-636.515,0,-87.4749,-286.314,-297.308 0|1:338:99,87,27,124:99:3895:87,27,124:3395,1026,4898:-373.208,-131.848,-426.05,-320.487,-369.717,-632.752,0,-49.2353,-237.875,-283.07 dDocent_Contig_7661 8 . G T 151.965 . AB=0.259259;ABP=16.6021;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=143;DPB=143;DPRA=1.16379;EPP=18.2106;EPPR=298.331;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9118;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.691176;PAO=0;PQA=0;PQR=0;PRO=0;QA=272;QR=5207;RO=136;RPL=0;RPP=18.2106;RPPR=298.331;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=136;SRP=298.331;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:621:0:0:0,-4.81648,-56.2301 0/0:31:31,0:31:1184:0:0:0,-9.33193,-106.815 0/0:15:15,0:15:582:0:0:0,-4.51545,-52.7231 0/0:37:37,0:37:1415:0:0:0,-11.1381,-127.629 0/0:17:17,0:17:633:0:0:0,-5.11751,-57.2964 0/1:27:20,7:20:772:7:272:-16.7194,0,-61.6795 dDocent_Contig_7662 19 . A C 11150.6 . AB=0.176895;ABP=505.365;AC=1;AF=0.0833333;AN=12;AO=98;CIGAR=1M3I2M2X3M1X;DP=664;DPB=828.667;DPRA=0;EPP=215.815;EPPR=367.818;GTI=0;LEN=1;MEANALT=4.2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.989796;PAIREDR=0.958333;PAO=0;PQA=0;PQR=0;PRO=0;QA=3788;QR=6488;RO=168;RPL=0;RPP=215.815;RPPR=367.818;RPR=98;RUN=1;SAF=98;SAP=215.815;SAR=0;SRF=168;SRP=367.818;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:116:27,42,32,13:27:1036:42,32,13:1617,1218,501:-139.493,-14.8631,-87.2553,-47.7224,0,-123.124,-106.483,-58.7609,-91.6194,-187.604 0|0:130:35,26,61,7:35:1345:26,61,7:1020,2361,270:-183.403,-110.051,-212.633,0,-26.5169,-92.0435,-171.768,-198.289,-88.2355,-280.069 0|0:68:21,8,37,2:21:826:8,37,2:310,1413,78:-109.596,-90.4501,-155.992,0,-42.4841,-56.8117,-109.506,-151.988,-61.5381,-176.853 0|0:109:24,19,57,9:24:934:19,57,9:721,2209,357:-174.248,-122.358,-193.4,0,-17.6503,-59.604,-152.084,-169.731,-47.3728,-226.136 0|0:110:16,0,93,0:16:605:0,93,0:0,3629,0:-293.495,-298.311,-347.896,0,-49.5758,-21.58,-298.311,-347.896,-49.5758,-347.896 0|0:131:45,3,76,4:45:1742:3,76,4:120,2919,151:-226.044,-229.704,-371.895,0,-133.206,-120.213,-227.216,-360.424,-130.718,-369.106 dDocent_Contig_7663 1 . N A 1755.28 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=51;CIGAR=1X1M5I2M;DP=51;DPB=123.75;DPRA=0;EPP=113.755;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0784314;PAIREDR=0;PAO=4;PQA=148;PQR=0;PRO=0;QA=1922;QR=0;RO=0;RPL=0;RPP=113.755;RPPR=0;RPR=51;RUN=1;SAF=51;SAP=113.755;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:2:0,2:0:0:2:76:-7.21481,-0.60206,0 1|1:2:0,2:0:0:2:74:-6.65599,-0.60206,0 1|1:13:0,13:0:0:13:488:-44.2662,-3.91339,0 1|1:7:0,7:0:0:7:266:-24.3025,-2.10721,0 1|1:20:0,20:0:0:20:755:-68.2805,-6.0206,0 1|1:7:0,7:0:0:7:263:-24.0298,-2.10721,0 dDocent_Contig_7664 8 . G A 1196.23 . AB=0.230159;ABP=162.389;AC=4;AF=0.333333;AN=12;AO=62;CIGAR=1X;DP=421;DPB=421;DPRA=0;EPP=137.642;EPPR=782.569;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.725806;PAIREDR=0.144847;PAO=0;PQA=0;PQR=0;PRO=0;QA=2396;QR=13710;RO=359;RPL=0;RPP=137.642;RPPR=782.569;RPR=62;RUN=1;SAF=62;SAP=137.642;SAR=0;SRF=359;SRP=782.569;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:45:37,8:37:1394:8:313:-14.9883,0,-112.195 0/1:70:61,9:61:2326:9:345:-10.3355,0,-188.484 0/0:97:95,2:95:3637:2:81:0,-21.5142,-319.765 0/0:72:70,2:70:2667:2:78:0,-14.2707,-232.817 0/1:63:50,13:50:1910:13:497:-26.1116,0,-153.179 0/1:74:46,28:46:1776:28:1082:-75.4091,0,-137.817 dDocent_Contig_7665 22 . C A 6356.15 . AB=0.43295;ABP=23.3939;AC=6;AF=0.5;AN=12;AO=226;CIGAR=1X;DP=522;DPB=522;DPRA=0;EPP=493.763;EPPR=645.766;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9324;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8917;QR=11850;RO=296;RPL=0;RPP=493.763;RPPR=645.766;RPR=226;RUN=1;SAF=226;SAP=493.763;SAR=0;SRF=296;SRP=645.766;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:30,11:30:1217:11:404:-24.3474,0,-97.1431 0/1:110:81,29:81:3235:29:1166:-72.1045,0,-258.085 0/1:110:80,30:80:3232:30:1197:-74.8913,0,-257.815 0/1:65:45,20:45:1773:20:806:-53.2895,0,-140.211 0/1:104:21,83:21:833:83:3266:-262.696,0,-43.9715 0/1:92:39,53:39:1560:53:2078:-159.508,0,-112.941 dDocent_Contig_7666 32 . C T 14327.6 . AB=0.676946;ABP=188.21;AC=6;AF=0.5;AN=12;AO=461;CIGAR=1X;DP=681;DPB=681;DPRA=0;EPP=1004.06;EPPR=480.734;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.954447;PAIREDR=0.981818;PAO=0;PQA=0;PQR=0;PRO=0;QA=18316;QR=8664;RO=220;RPL=0;RPP=1004.06;RPPR=480.734;RPR=461;RUN=1;SAF=461;SAP=1004.06;SAR=0;SRF=220;SRP=480.734;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:171:44,127:44:1691:127:5021:-400.309,0,-100.942 0/1:186:65,121:65:2609:121:4824:-378.07,0,-178.944 0/1:124:34,90:34:1314:90:3581:-284.991,0,-81.1866 0/1:163:49,114:49:1939:114:4528:-358.396,0,-125.643 0/1:27:24,3:24:954:3:120:-3.06009,0,-78.0329 0/1:10:4,6:4:157:6:242:-19.1461,0,-11.4976 dDocent_Contig_7667 33 . T G 21832 . AB=0.625472;ABP=147.958;AC=8;AF=0.666667;AN=12;AO=663;CIGAR=1X3M;DP=1060;DPB=1060;DPRA=0;EPP=1442.7;EPPR=558.907;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=26206;QR=9980;RO=256;RPL=0;RPP=1442.7;RPPR=558.907;RPR=663;RUN=1;SAF=663;SAP=1442.7;SAR=0;SRF=256;SRP=558.907;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:118:3,15,0,99:3:108:15,0,99:584,0,3912:-360.205,-313.113,-317.408,-361.109,-321.923,-369.918,-39.2089,0,-48.0149,-18.213 0|1:191:53,20,21,97:53:2053:20,21,97:790,812,3792:-295.748,-246.697,-409.317,-245.014,-348.649,-407.333,0,-103.633,-101.951,-139.44 1|1:143:17,8,40,78:17:665:8,40,78:317,1586,3094:-325.424,-304.448,-356.715,-199.997,-228.579,-242.631,-75.8721,-104.454,0,-107.066 0|1:103:25,8,7,63:25:971:8,7,63:308,267,2518:-199.878,-182.119,-259.492,-185.502,-239.999,-263.177,0,-54.5017,-57.8861,-60.8229 0|1:299:51,0,16,232:51:1993:0,16,232:0,614,9153:-737.689,-753.042,-916.886,-702.652,-866.497,-861.68,0,-163.85,-113.462,-94.0115 0|1:206:107,3,0,94:107:4190:3,0,94:116,0,3737:-275.48,-298.162,-641.769,-307.69,-642.672,-652.2,0,-335.022,-344.55,-316.253 dDocent_Contig_7668 204 . G A 86.9921 . AB=0.181818;ABP=32.0291;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=149;DPB=149;DPRA=1.17021;EPP=20.3821;EPPR=307.016;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.714286;PAO=0;PQA=0;PQR=0;PRO=0;QA=289;QR=5102;RO=140;RPL=8;RPP=20.3821;RPPR=307.016;RPR=0;RUN=1;SAF=0;SAP=20.3821;SAR=8;SRF=0;SRP=307.016;SRR=140;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:634:0:0:0,-5.41854,-57.3795 0/0:27:27,0:27:993:0:0:0,-8.12781,-89.687 0/0:16:16,0:16:588:0:0:0,-4.81648,-53.2575 0/0:33:32,0:32:1169:0:0:0,-9.63296,-105.409 0/1:33:27,6:27:986:6:220:-10.2215,0,-79.122 0/0:22:20,2:20:732:2:69:0,-0.0703748,-59.6571 dDocent_Contig_7669 72 . C T 53.5488 . AB=0.181818;ABP=32.0291;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=1X;DP=98;DPB=98;DPRA=1.33333;EPP=18.2106;EPPR=200.614;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=227;QR=2863;RO=91;RPL=7;RPP=18.2106;RPPR=200.614;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=91;SRP=200.614;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:12,4:12:381:4:123:-6.55745,0,-29.7833 0/0:23:22,1:22:691:1:35:0,-3.42506,-58.9923 0/0:9:9,0:9:268:0:0:0,-2.70927,-24.4132 0/1:17:15,2:15:472:2:69:-1.43515,0,-37.6683 0/0:15:15,0:15:477:0:0:0,-4.51545,-43.2376 0/0:18:18,0:18:574:0:0:0,-5.41854,-51.9668 dDocent_Contig_7670 7 . T G 1373.33 . AB=0.261168;ABP=147.186;AC=4;AF=0.4;AN=10;AO=76;CIGAR=1X;DP=297;DPB=297;DPRA=12.125;EPP=168.042;EPPR=480.734;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2566;QR=8376;RO=220;RPL=0;RPP=168.042;RPPR=480.734;RPR=76;RUN=1;SAF=76;SAP=168.042;SAR=0;SRF=220;SRP=480.734;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:100:70,30:70:2665:30:1010:-61.0816,0,-209.942 0/1:71:53,18:53:2010:18:652:-37.6273,0,-159.766 0/1:39:27,12:27:1031:12:328:-18.0441,0,-81.3569 0/1:81:64,16:64:2441:16:576:-27.881,0,-195.618 ./.:.:.:.:.:.:.:. 0/0:6:6,0:6:229:0:0:0,-1.80618,-20.9753 dDocent_Contig_7671 11 . G T 3588.27 . AB=0.25641;ABP=304.511;AC=6;AF=0.5;AN=12;AO=150;CIGAR=1X3M;DP=585;DPB=585;DPRA=0;EPP=328.731;EPPR=727.397;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=5.55112e-17;PAIRED=0.953333;PAIREDR=0.908861;PAO=0;PQA=0;PQR=0;PRO=0;QA=5941;QR=15003;RO=395;RPL=0;RPP=328.731;RPPR=860.742;RPR=150;RUN=1;SAF=150;SAP=328.731;SAR=0;SRF=379;SRP=727.397;SRR=16;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:93:51,14,0,27:51:1957:14,0,27:542,0,1080:-73.6179,-44.459,-200.864,-88.9704,-205.079,-249.594,0,-116.111,-160.627,-152.499 0|1:130:94,12,0,24:94:3546:12,0,24:479,0,948:-49.7031,-38.5489,-325.513,-77.9999,-329.126,-368.577,0,-251.119,-290.572,-283.347 0|1:63:49,1,0,13:49:1874:1,0,13:40,0,496:-25.9178,-37.3719,-190.837,-40.6683,-191.138,-194.434,0,-150.453,-153.748,-149.835 0|1:97:47,4,0,46:47:1791:4,0,46:153,0,1834:-136.897,-138.493,-284.194,-151.045,-285.398,-297.951,0,-134.36,-146.913,-133.065 0|1:85:69,0,5,11:69:2619:0,5,11:0,198,444:-15.8358,-36.6069,-251.342,-20.3129,-235.045,-233.539,0,-214.737,-198.44,-211.426 0|1:117:85,0,2,29:85:3216:0,2,29:0,80,1139:-68.0777,-93.6652,-357.27,-87.0747,-350.68,-350.078,0,-263.592,-257.002,-254.862 dDocent_Contig_7672 39 . T C 41.3752 . AB=0.153846;ABP=30.0702;AC=2;AF=0.166667;AN=12;AO=4;CIGAR=1X;DP=109;DPB=109;DPRA=0.626506;EPP=11.6962;EPPR=231.015;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.761905;PAO=0;PQA=0;PQR=0;PRO=0;QA=160;QR=4186;RO=105;RPL=0;RPP=11.6962;RPPR=231.015;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=105;SRP=231.015;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:10,2:10:399:2:78:-3.79094,0,-32.6554 0/0:20:20,0:20:800:0:0:0,-6.0206,-72.3157 0/0:21:21,0:21:826:0:0:0,-6.32163,-74.6528 0/0:35:35,0:35:1404:0:0:0,-10.536,-126.611 0/1:14:12,2:12:473:2:82:-3.56526,0,-38.7008 0/0:7:7,0:7:284:0:0:0,-2.10721,-25.9338 dDocent_Contig_7673 48 . C T 170.049 . AB=0.145833;ABP=107.603;AC=3;AF=0.25;AN=12;AO=14;CIGAR=1X;DP=173;DPB=173;DPRA=1.24675;EPP=33.4109;EPPR=339.643;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.571429;PAIREDR=0.622642;PAO=0;PQA=0;PQR=0;PRO=0;QA=555;QR=6344;RO=159;RPL=0;RPP=33.4109;RPPR=339.643;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=159;SRP=348.274;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:1139:0:0:0,-8.72987,-102.792 0/1:26:23,3:23:906:3:118:-3.17594,0,-74.0157 0/1:29:22,7:22:885:7:279:-16.7504,0,-71.2279 0/0:28:28,0:28:1108:0:0:0,-8.42884,-100.006 0/0:20:20,0:20:811:0:0:0,-6.0206,-73.3056 0/1:41:37,4:37:1495:4:158:-2.25774,0,-122.451 dDocent_Contig_7674 127 . A G 556.055 . AB=0.233871;ABP=79.292;AC=5;AF=0.416667;AN=12;AO=30;CIGAR=1X;DP=143;DPB=143;DPRA=0;EPP=68.1545;EPPR=248.387;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.766667;PAIREDR=0.761062;PAO=0;PQA=0;PQR=0;PRO=0;QA=1139;QR=4297;RO=113;RPL=0;RPP=68.1545;RPPR=248.387;RPR=30;RUN=1;SAF=0;SAP=68.1545;SAR=30;SRF=0;SRP=248.387;SRR=113;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:17,7:17:625:7:277:-18.0758,0,-49.346 0/1:15:12,3:12:457:3:87:-3.59813,0,-36.9593 0/1:29:20,9:20:765:9:351:-23.2215,0,-60.4371 0/1:23:16,7:16:625:7:272:-17.9234,0,-49.6655 0/1:33:30,3:30:1135:3:117:-0.975919,0,-92.5107 0/0:19:18,1:18:690:1:35:0,-2.22094,-58.9337 dDocent_Contig_7676 10 . T C 100.957 . AB=0.142857;ABP=65.0524;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=188;DPB=188;DPRA=0.74;EPP=31.2394;EPPR=383.018;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.615385;PAIREDR=0.64;PAO=0;PQA=0;PQR=0;PRO=0;QA=500;QR=6920;RO=175;RPL=0;RPP=31.2394;RPPR=383.018;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=175;SRP=383.018;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:18,2:18:719:2:80:-1.57098,0,-59.0158 0/0:39:36,3:36:1397:3:93:0,-3.06542,-117.309 0/0:22:21,1:21:835:1:41:0,-2.52809,-71.3675 0/1:36:30,6:30:1199:6:245:-11.5924,0,-97.3493 0/0:40:40,0:40:1568:0:0:0,-12.0412,-141.363 0/0:31:30,1:30:1202:1:41:0,-5.23736,-104.362 dDocent_Contig_7677 12 . C T 243.885 . AB=0.128655;ABP=207.827;AC=2;AF=0.166667;AN=12;AO=25;CIGAR=1X;DP=359;DPB=359;DPRA=1.61176;EPP=57.2971;EPPR=728.282;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=994;QR=13243;RO=334;RPL=0;RPP=57.2971;RPPR=728.282;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=334;SRP=728.282;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:55:53,2:53:2093:2:82:0,-8.77697,-180.776 0/1:90:76,14:76:2992:14:565:-24.0998,0,-242.278 0/1:81:73,8:73:2916:8:306:-3.50834,0,-238.155 0/0:48:47,1:47:1862:1:41:0,-10.3549,-163.688 0/0:48:48,0:48:1919:0:0:0,-14.4494,-172.908 0/0:37:37,0:37:1461:0:0:0,-11.1381,-131.732 dDocent_Contig_7678 86 . A T 107.876 . AB=0.25;ABP=24.725;AC=3;AF=0.25;AN=12;AO=10;CIGAR=1X;DP=86;DPB=86;DPRA=0.869565;EPP=24.725;EPPR=168.042;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=301;QR=2423;RO=76;RPL=10;RPP=24.725;RPPR=168.042;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=76;SRP=168.042;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:14:10,4:10:314:4:117:-6.60603,0,-24.3532 0/0:23:23,0:23:744:0:0:0,-6.92369,-67.2666 0/0:14:14,0:14:449:0:0:0,-4.21442,-40.7183 0/0:9:9,0:9:291:0:0:0,-2.70927,-26.5061 0/1:8:6,2:6:169:2:46:-1.96093,0,-13.0796 0/1:18:14,4:14:456:4:138:-7.34186,0,-35.9361 dDocent_Contig_7679 14 . A G 775.673 . AB=0.134969;ABP=568.965;AC=4;AF=0.333333;AN=12;AO=66;CIGAR=1X;DP=582;DPB=582;DPRA=2.62903;EPP=146.327;EPPR=1123.49;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0;PAIREDR=0.186047;PAO=0;PQA=0;PQR=0;PRO=0;QA=2563;QR=20276;RO=516;RPL=0;RPP=146.327;RPPR=1123.49;RPR=66;RUN=1;SAF=66;SAP=146.327;SAR=0;SRF=516;SRP=1123.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:129:107,22:107:4160:22:832:-36.3522,0,-335.58 0/1:187:169,18:169:6651:18:711:-8.02428,0,-542.072 0/1:65:57,8:57:2255:8:318:-9.41967,0,-183.563 0/1:108:90,18:90:3550:18:702:-30.9931,0,-287.05 0/0:27:27,0:27:1047:0:0:0,-8.12781,-94.5211 0/0:66:66,0:66:2613:0:0:0,-19.868,-235.316 dDocent_Contig_7680 7 . T C 84.6753 . AB=0.125;ABP=61.6401;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=2X;DP=209;DPB=209;DPRA=1.536;EPP=16.0391;EPPR=422.104;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.927461;PAO=0;PQA=0;PQR=0;PRO=0;QA=230;QR=7372;RO=193;RPL=0;RPP=16.0391;RPPR=422.104;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=193;SRP=422.104;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:34:34,0,0:34:1305:0,0:0,0:0,-10.235,-117.741,-10.235,-117.741,-117.741 0|1:48:36,6,6:36:1380:6,6:230,230:-8.04059,0,-111.458,0,-94.3862,-111.458 0|0:14:14,0,0:14:526:0,0:0,0:0,-4.21442,-47.6816,-4.21442,-47.6816,-47.6816 0|0:36:32,0,4:32:1228:0,4:0,156:-3.58021,-13.2132,-114.006,0,-101.182,-99.9776 0|0:30:30,0,0:30:1149:0,0:0,0:0,-9.0309,-103.711,-9.0309,-103.711,-103.711 0|0:47:47,0,0:47:1784:0,0:0,0:0,-14.1484,-160.81,-14.1484,-160.81,-160.81 dDocent_Contig_7681 1 . N G 121.769 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_7682 1 . N G 5969.61 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=194;CIGAR=1X;DP=194;DPB=194;DPRA=0;EPP=424.276;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=58.5722;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6608;QR=0;RO=0;RPL=0;RPP=424.276;RPPR=0;RPR=194;RUN=1;SAF=0;SAP=424.276;SAR=194;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:35:0,35:0:0:35:1201:-108.32,-10.5361,0 1/1:38:0,38:0:0:38:1280:-115.457,-11.4391,0 1/1:29:0,29:0:0:29:1003:-90.5826,-8.72987,0 1/1:46:0,46:0:0:46:1556:-140.315,-13.8474,0 1/1:22:0,22:0:0:22:751:-67.7613,-6.62266,0 1/1:24:0,24:0:0:24:817:-73.681,-7.22472,0 dDocent_Contig_7684 137 . C T 41.3008 . AB=0.157895;ABP=22.325;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=136;DPB=136;DPRA=0.811966;EPP=9.52472;EPPR=291.816;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.669173;PAO=0;PQA=0;PQR=0;PRO=0;QA=122;QR=5262;RO=133;RPL=0;RPP=9.52472;RPPR=291.816;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=291.816;SRR=133;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:329:0:0:0,-2.70927,-29.9415 0/1:19:16,3:16:588:3:122:-5.65292,0,-47.5165 0/0:29:29,0:29:1176:0:0:0,-8.72987,-106.114 0/0:17:17,0:17:682:0:0:0,-5.11751,-61.7084 0/0:44:44,0:44:1765:0:0:0,-13.2453,-159.068 0/0:18:18,0:18:722:0:0:0,-5.41854,-65.3046 dDocent_Contig_7685 7 . T A 39.6778 . AB=0.121951;ABP=53.9075;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=716;DPB=716;DPRA=0.494774;EPP=18.2106;EPPR=1542.58;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.956276;PAO=0;PQA=0;PQR=0;PRO=0;QA=272;QR=27088;RO=709;RPL=0;RPP=18.2106;RPPR=1542.58;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=709;SRP=1542.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:127:127,0:127:4864:0:0:0,-38.2308,-437.79 0/0:218:218,0:218:8357:0:0:0,-65.6245,-751.902 0/0:84:84,0:84:3175:0:0:0,-25.2865,-285.902 0/0:145:145,0:145:5543:0:0:0,-43.6493,-498.85 0/0:101:99,2:99:3767:2:78:0,-23.0006,-331.733 0/1:41:36,5:36:1382:5:194:-5.49061,0,-112.32 dDocent_Contig_7686 8 . G A 2051.32 . AB=0.32567;ABP=71.9067;AC=5;AF=0.416667;AN=12;AO=87;CIGAR=1X;DP=286;DPB=286;DPRA=0;EPP=191.928;EPPR=435.133;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.939698;PAO=0;PQA=0;PQR=0;PRO=0;QA=3314;QR=7570;RO=199;RPL=0;RPP=191.928;RPPR=435.133;RPR=87;RUN=1;SAF=87;SAP=191.928;SAR=0;SRF=199;SRP=435.133;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:53:46,7:46:1763:7:272:-8.89264,0,-142.972 0/1:38:16,22:16:602:22:826:-63.2213,0,-43.0761 0/1:63:46,17:46:1744:17:647:-39.6021,0,-138.252 0/1:60:39,21:39:1501:21:791:-53.4515,0,-117.3 0/0:25:23,2:23:854:2:78:0,-0.122277,-69.7694 0/1:47:29,18:29:1106:18:700:-49.1858,0,-85.6947 dDocent_Contig_7687 50 . T C 118.717 . AB=0.173077;ABP=51.2838;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=297;DPB=297;DPRA=1.04688;EPP=33.4109;EPPR=617.537;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.714286;PAIREDR=0.469965;PAO=0;PQA=0;PQR=0;PRO=0;QA=500;QR=10651;RO=283;RPL=5;RPP=5.49198;RPPR=27.94;RPR=9;RUN=1;SAF=5;SAP=5.49198;SAR=9;SRF=170;SRP=27.94;SRR=113;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:46:46,0:46:1748:0:0:0,-13.8474,-157.566 0/1:52:43,9:43:1603:9:319:-13.3946,0,-128.884 0/0:33:31,2:31:1203:2:70:0,-3.28666,-101.909 0/0:57:56,1:56:2072:1:34:0,-13.7598,-183.304 0/0:50:50,0:50:1840:0:0:0,-15.0515,-165.848 0/0:59:57,2:57:2185:2:77:0,-10.4526,-189.547 dDocent_Contig_7688 168 . T G 346.824 . AB=0.290909;ABP=23.8959;AC=3;AF=0.25;AN=12;AO=16;CIGAR=1X;DP=155;DPB=155;DPRA=0.55;EPP=37.7539;EPPR=304.845;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=615;QR=5507;RO=139;RPL=16;RPP=37.7539;RPPR=304.845;RPR=0;RUN=1;SAF=0;SAP=37.7539;SAR=16;SRF=0;SRP=304.845;SRR=139;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:681:0:0:0,-5.11751,-61.6203 0/1:15:5,10:5:193:10:377:-29.7552,0,-13.223 0/1:24:21,3:21:837:3:115:-3.49849,0,-68.4133 0/1:16:13,3:13:507:3:123:-6.64831,0,-41.1521 0/0:47:47,0:47:1889:0:0:0,-14.1484,-170.213 0/0:36:36,0:36:1400:0:0:0,-10.8371,-126.246 dDocent_Contig_7689 14 . G T 1936.7 . AB=0.537815;ABP=4.48836;AC=2;AF=0.166667;AN=12;AO=64;CIGAR=1X;DP=680;DPB=680;DPRA=0.424242;EPP=141.985;EPPR=1340.64;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.974026;PAO=0;PQA=0;PQR=0;PRO=0;QA=2580;QR=24701;RO=616;RPL=0;RPP=141.985;RPPR=1340.64;RPR=64;RUN=1;SAF=64;SAP=141.985;SAR=0;SRF=616;SRP=1340.64;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:167:167,0:167:6697:0:0:0,-50.272,-602.413 0/0:165:165,0:165:6589:0:0:0,-49.6699,-592.714 0/0:101:101,0:101:4052:0:0:0,-30.404,-364.649 0/0:128:128,0:128:5150:0:0:0,-38.5318,-463.351 0/1:100:42,58:42:1688:58:2338:-180.455,0,-122.038 0/1:19:13,6:13:525:6:242:-16.4369,0,-41.8766 dDocent_Contig_7690 12 . T C 50.4016 . AB=0.148148;ABP=32.0437;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=132;DPB=132;DPRA=1.56757;EPP=16.0391;EPPR=276.616;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=0.753968;PAO=0;PQA=0;PQR=0;PRO=0;QA=240;QR=5063;RO=126;RPL=0;RPP=16.0391;RPPR=276.616;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=126;SRP=276.616;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:691:0:0:0,-5.11751,-62.5188 0/0:23:23,0:23:921:0:0:0,-6.92369,-83.1938 0/0:25:25,0:25:1005:0:0:0,-7.52575,-90.7422 0/0:9:9,0:9:360:0:0:0,-2.70927,-32.7629 0/0:31:29,2:29:1162:2:81:0,-1.6462,-97.1673 0/1:27:23,4:23:924:4:159:-6.56302,0,-75.3355 dDocent_Contig_7691 44 . A T 129.644 . AB=0.130435;ABP=139.435;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=279;DPB=279;DPRA=1.14615;EPP=37.7539;EPPR=574.108;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.875;PAIREDR=0.939163;PAO=0;PQA=0;PQR=0;PRO=0;QA=581;QR=10277;RO=263;RPL=0;RPP=37.7539;RPPR=574.108;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=263;SRP=574.108;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:53:44,9:44:1711:9:331:-14.1841,0,-138.27 0/1:62:56,6:56:2095:6:209:-0.482653,0,-170.063 0/0:38:38,0:38:1481:0:0:0,-11.4391,-133.542 0/0:34:33,1:33:1320:1:41:0,-6.14045,-114.972 0/0:40:40,0:40:1578:0:0:0,-12.0412,-142.262 0/0:52:52,0:52:2092:0:0:0,-15.6536,-188.457 dDocent_Contig_7693 43 . T G 2711.52 . AB=0.379661;ABP=40.1167;AC=6;AF=0.5;AN=12;AO=112;CIGAR=1X;DP=295;DPB=295;DPRA=0;EPP=7.97367;EPPR=11.6606;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.571429;PAIREDR=0.622951;PAO=0;PQA=0;PQR=0;PRO=0;QA=4103;QR=6643;RO=183;RPL=0;RPP=246.215;RPPR=400.39;RPR=112;RUN=1;SAF=48;SAP=7.97367;SAR=64;SRF=78;SRP=11.6606;SRR=105;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:50:42,8:42:1520:8:295:-11.8496,0,-122.014 0/1:57:33,24:33:1188:24:872:-61.6226,0,-90.0537 0/1:27:17,10:17:602:10:367:-25.2461,0,-46.362 0/1:62:29,33:29:1053:33:1228:-92.1402,0,-76.4014 0/1:37:15,22:15:572:22:823:-63.2458,0,-40.6779 0/1:62:47,15:47:1708:15:518:-28.27,0,-135.302 dDocent_Contig_7694 47 . A G 55.7966 . AB=0.114286;ABP=93.4676;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=215;DPB=215;DPRA=0.878205;EPP=29.068;EPPR=221.751;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=0.778325;PAO=0;PQA=0;PQR=0;PRO=0;QA=449;QR=7483;RO=203;RPL=0;RPP=29.068;RPPR=338.134;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=186;SRP=308.525;SRR=17;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:21,2:21:790:2:78:-0.479611,0,-64.4995 0/1:47:41,6:41:1532:6:232:-7.10035,0,-123.999 0/0:27:26,1:26:969:1:33:0,-4.82867,-84.2203 0/0:40:37,3:37:1387:3:106:0,-2.1525,-115.223 0/0:38:38,0:38:1354:0:0:0,-11.4391,-122.143 0/0:40:40,0:40:1451:0:0:0,-12.0412,-130.861 dDocent_Contig_7695 10 . A T 3142.57 . AB=0.129647;ABP=2502.5;AC=3;AF=0.25;AN=12;AO=334;CIGAR=1X;DP=3829;DPB=3829;DPRA=0;EPP=728.282;EPPR=7585.79;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999427;PAO=0;PQA=0;PQR=0;PRO=0;QA=13032;QR=135323;RO=3492;RPL=0;RPP=728.282;RPPR=7585.79;RPR=334;RUN=1;SAF=334;SAP=728.282;SAR=0;SRF=3492;SRP=7585.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:493:488,5:488:18940:5:198:0,-130.211,-1685.13 0/1:648:560,88:560:21635:88:3396:-110.663,0,-1750.66 0/0:548:513,35:513:19894:35:1397:0,-38.9722,-1663.12 0/1:822:698,124:698:27071:124:4893:-192.859,0,-2187.03 0/0:690:668,22:668:25810:22:878:0,-128.379,-2241.79 0/1:628:565,60:565:21973:60:2270:-15.9569,0,-1787.51 dDocent_Contig_7696 13 . G A 6628.83 . AB=0.379688;ABP=83.4769;AC=6;AF=0.5;AN=12;AO=243;CIGAR=1X;DP=640;DPB=640;DPRA=0;EPP=530.678;EPPR=865.085;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.62963;PAIREDR=0.59194;PAO=0;PQA=0;PQR=0;PRO=0;QA=9615;QR=15848;RO=397;RPL=0;RPP=530.678;RPPR=865.085;RPR=243;RUN=1;SAF=243;SAP=530.678;SAR=0;SRF=397;SRP=865.085;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:119:60,59:60:2386:59:2314:-172.606,0,-179.061 0/1:157:101,56:101:4011:56:2233:-153.885,0,-313.721 0/1:135:80,55:80:3201:55:2204:-157.888,0,-247.515 0/1:93:57,36:57:2278:36:1415:-99.6103,0,-177.186 0/1:62:49,13:49:1959:13:502:-26.8589,0,-157.846 0/1:74:50,24:50:2013:24:947:-63.2564,0,-159.082 dDocent_Contig_7697 11 . T C 3464.82 . AB=0.112108;ABP=294.445;AC=0;AF=0;AN=12;AO=25;CIGAR=4M1X4M;DP=322;DPB=322;DPRA=0;EPP=57.2971;EPPR=350.446;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=990;QR=6203;RO=160;RPL=0;RPP=57.2971;RPPR=350.446;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=160;SRP=350.446;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:14:3,2,9,0:3:115:2,9,0:71,347,0:-27.6142,-22.7385,-31.5748,0,-3.68292,-6.74658,-28.5172,-32.1769,-9.45585,-37.9569 0|0:47:32,3,11,0:32:1239:3,11,0:118,410,0:-23.3691,-23.2901,-124.177,0,-92.068,-98.464,-33.0021,-125.08,-101.775,-134.788 0|0:14:11,0,3,0:11:430:0,3,0:0,116,0:-6.60312,-9.91445,-45.2711,0,-35.7439,-34.8408,-9.91445,-45.2711,-35.7439,-45.2711 0|0:24:17,0,7,0:17:657:0,7,0:0,220,0:-11.5095,-16.627,-70.653,0,-54.346,-52.2388,-16.627,-70.653,-54.346,-70.653 0|0:104:45,0,54,5:45:1739:0,54,5:0,2038,203:-152.073,-165.619,-308.447,0,-142.807,-126.551,-148.874,-291.704,-126.062,-290.198 0|0:119:52,0,47,20:52:2023:0,47,20:0,1850,787:-136.535,-152.189,-318.439,0,-166.248,-152.1,-87.4576,-253.707,-101.516,-247.686 dDocent_Contig_7698 21 . G A 43.2153 . AB=0.129032;ABP=40.0654;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=211;DPB=211;DPRA=0.851351;EPP=16.0391;EPPR=448.162;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.507317;PAO=0;PQA=0;PQR=0;PRO=0;QA=243;QR=8163;RO=205;RPL=0;RPP=16.0391;RPPR=448.162;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=205;SRP=448.162;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:27,4:27:1091:4:161:-5.54334,0,-89.142 0/0:32:30,2:30:1175:2:82:0,-1.85328,-98.2463 0/0:41:41,0:41:1629:0:0:0,-12.3422,-146.838 0/0:43:43,0:43:1691:0:0:0,-12.9443,-152.414 0/0:33:33,0:33:1320:0:0:0,-9.93399,-119.06 0/0:31:31,0:31:1257:0:0:0,-9.33193,-113.397 dDocent_Contig_7699 28 . C A 5695.03 . AB=0.50324;ABP=3.05251;AC=4;AF=0.333333;AN=12;AO=235;CIGAR=1X;DP=619;DPB=619;DPRA=1.27381;EPP=513.306;EPPR=836.856;GTI=0;LEN=1;MEANALT=1;MQM=36.9021;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0553191;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9302;QR=15157;RO=384;RPL=0;RPP=513.306;RPPR=836.856;RPR=235;RUN=1;SAF=235;SAP=513.306;SAR=0;SRF=384;SRP=836.856;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:99:59,40:59:2330:40:1605:-93.6561,0,-180.05 0/1:178:71,107:71:2749:107:4198:-274.985,0,-193.943 0/1:83:42,41:42:1682:41:1650:-103.626,0,-126.617 0/1:103:58,45:58:2285:45:1770:-104.458,0,-174.805 0/0:84:84,0:84:3333:0:0:0,-25.2865,-300.021 0/0:72:70,2:70:2778:2:79:0,-15.1493,-243.604 dDocent_Contig_7700 112 . A C 30.0065 . AB=0.125;ABP=51.8684;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=128;DPB=128;DPRA=0.882353;EPP=16.0391;EPPR=267.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.581967;PAO=0;PQA=0;PQR=0;PRO=0;QA=224;QR=4652;RO=122;RPL=0;RPP=16.0391;RPPR=267.93;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=267.93;SRR=122;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:893:0:0:0,-7.22472,-80.6785 0/0:22:22,0:22:851:0:0:0,-6.62266,-76.9122 0/0:22:22,0:22:855:0:0:0,-6.62266,-77.2718 0/1:20:17,3:17:632:3:113:-4.51837,0,-51.1882 0/0:20:19,1:19:730:1:39:0,-2.12404,-62.1335 0/1:20:18,2:18:691:2:72:-0.815771,0,-56.5021 dDocent_Contig_7701 22 . T A 194.27 . AB=0.296296;ABP=12.7417;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X2M2X;DP=143;DPB=143;DPRA=1.66667;EPP=26.8965;EPPR=285.302;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.976923;PAO=0;PQA=0;PQR=0;PRO=0;QA=440;QR=5188;RO=130;RPL=0;RPP=26.8965;RPPR=285.302;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=130;SRP=285.302;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:11:11,0:11:441:0:0:0,-3.31133,-40.0459 0|1:27:19,8:19:759:8:319:-20.9493,0,-60.5068 0|0:15:15,0:15:607:0:0:0,-4.51545,-54.9681 0|0:13:13,0:13:515:0:0:0,-3.91339,-46.6962 0|0:39:37,0:37:1456:0:0:0,-11.1381,-130.886 0|0:38:35,3:35:1410:3:121:0,-0.158943,-115.87 dDocent_Contig_7702 7 . T A 75.7347 . AB=0.0930233;ABP=683.489;AC=1;AF=0.0833333;AN=12;AO=48;CIGAR=1X;DP=2672;DPB=2672;DPRA=0.661935;EPP=107.241;EPPR=5687.93;GTI=0;LEN=1;MEANALT=1.8;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998854;PAO=0;PQA=0;PQR=0;PRO=0;QA=1788;QR=99017;RO=2618;RPL=0;RPP=107.241;RPPR=5687.93;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=2618;SRP=5687.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:392:389,1:389:14660:1:39:0,-113.862,-1314.94 0/0:490:489,1:489:18486:1:23:0,-145.205,-1660.55 0/0:268:266,1:266:10140:1:11:0,-79.49,-911.059 0/0:429:427,1:427:16136:1:39:0,-125.189,-1447.76 0/0:620:620,0:620:23499:0:0:0,-186.639,-2113.66 0/1:473:427,44:427:16096:44:1676:-9.09634,0,-1305.91 dDocent_Contig_7704 12 . T C 180.373 . AB=0.188679;ABP=47.6279;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=175;DPB=175;DPRA=1.03488;EPP=26.8965;EPPR=359.132;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.636364;PAIREDR=0.676829;PAO=0;PQA=0;PQR=0;PRO=0;QA=445;QR=6591;RO=164;RPL=0;RPP=26.8965;RPPR=359.132;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=164;SRP=359.132;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:19,6:19:755:6:244:-14.8131,0,-60.7414 0/0:29:29,0:29:1174:0:0:0,-8.72987,-105.934 0/0:36:35,1:35:1412:1:40:0,-6.8414,-123.334 0/1:28:24,4:24:957:4:161:-6.44606,0,-77.997 0/0:19:19,0:19:764:0:0:0,-5.71957,-69.0817 0/0:38:38,0:38:1529:0:0:0,-11.4391,-137.848 dDocent_Contig_7705 7 . T A 933.368 . AB=0.275168;ABP=68.4314;AC=2;AF=0.166667;AN=12;AO=41;CIGAR=1X;DP=443;DPB=443;DPRA=1.01361;EPP=92.0407;EPPR=871.599;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.853659;PAIREDR=0.73;PAO=0;PQA=0;PQR=0;PRO=0;QA=1560;QR=15305;RO=400;RPL=0;RPP=92.0407;RPPR=871.599;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=400;SRP=871.599;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:44,0:44:1671:0:0:0,-13.2453,-150.651 0/0:104:104,0:104:3948:0:0:0,-31.3071,-355.427 0/0:71:71,0:71:2719:0:0:0,-21.3731,-244.896 0/0:75:75,0:75:2871:0:0:0,-22.5772,-258.565 0/1:70:57,12:57:2206:12:457:-20.575,0,-177.874 0/1:79:49,29:49:1890:29:1103:-75.9837,0,-146.757 dDocent_Contig_7706 40 . T C 38.7772 . AB=0.0970149;ABP=192.026;AC=3;AF=0.25;AN=12;AO=15;CIGAR=1X;DP=220;DPB=220;DPRA=1.7;EPP=35.5824;EPPR=448.162;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=600;QR=8174;RO=205;RPL=0;RPP=35.5824;RPPR=448.162;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=205;SRP=448.162;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:18,3:18:725:3:122:-5.05086,0,-59.2529 0/0:31:31,0:31:1225:0:0:0,-9.33193,-110.525 0/1:56:51,5:51:1991:5:202:-1.70419,0,-162.517 0/1:57:52,5:52:2090:5:201:-1.31197,0,-171.123 0/0:19:19,0:19:770:0:0:0,-5.71957,-69.6207 0/0:36:34,2:34:1373:2:75:0,-3.71698,-116.704 dDocent_Contig_7707 7 . T C 4840.44 . AB=0.42654;ABP=22.7903;AC=6;AF=0.5;AN=12;AO=180;CIGAR=1X;DP=422;DPB=422;DPRA=0;EPP=393.875;EPPR=526.335;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=59.9253;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.676349;PAO=0;PQA=0;PQR=0;PRO=0;QA=6893;QR=9208;RO=241;RPL=0;RPP=393.875;RPPR=526.335;RPR=180;RUN=1;SAF=180;SAP=393.875;SAR=0;SRF=241;SRP=526.335;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:31,23:31:1193:23:885:-63.7144,0,-91.4115 0/1:79:48,31:48:1840:31:1186:-83.2562,0,-142.07 0/1:49:31,18:31:1163:18:692:-47.8633,0,-90.1928 0/1:64:37,26:37:1411:26:1001:-71.2683,0,-108.138 0/1:89:46,43:46:1771:43:1631:-120.262,0,-132.853 0/1:87:48,39:48:1830:39:1498:-108.903,0,-138.762 dDocent_Contig_7708 82 . A G 1782.12 . AB=0.533835;ABP=4.33278;AC=2;AF=0.166667;AN=12;AO=72;CIGAR=1X;DP=377;DPB=377;DPRA=1.23077;EPP=159.356;EPPR=665.309;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.652778;PAIREDR=0.67541;PAO=0;PQA=0;PQR=0;PRO=0;QA=2489;QR=10461;RO=305;RPL=72;RPP=159.356;RPPR=665.309;RPR=0;RUN=1;SAF=72;SAP=159.356;SAR=0;SRF=305;SRP=665.309;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:43:43,0:43:1480:0:0:0,-12.9443,-133.495 0/0:75:74,1:74:2530:1:35:0,-19.0786,-224.462 0/0:65:65,0:65:2232:0:0:0,-19.5669,-201.151 0/0:61:61,0:61:2089:0:0:0,-18.3628,-188.285 0/1:56:18,38:18:625:38:1314:-101.705,0,-39.7185 0/1:77:44,33:44:1505:33:1140:-79.7285,0,-112.565 dDocent_Contig_7709 13 . T C 1211.49 . AB=0.268817;ABP=89.3555;AC=1;AF=0.0833333;AN=12;AO=53;CIGAR=1X;DP=781;DPB=781;DPRA=3.08901;EPP=118.098;EPPR=1583.84;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.659341;PAO=0;PQA=0;PQR=0;PRO=0;QA=2100;QR=29289;RO=728;RPL=0;RPP=118.098;RPPR=1583.84;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=728;SRP=1583.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:155:154,1:154:6190:1:41:0,-42.5651,-552.739 0/0:249:247,2:247:9971:2:76:0,-67.7417,-889.469 0/0:87:87,0:87:3499:0:0:0,-26.1896,-314.929 0/1:186:136,50:136:5474:50:1983:-122.672,0,-436.482 0/0:30:30,0:30:1186:0:0:0,-9.0309,-107.016 0/0:74:74,0:74:2969:0:0:0,-22.2762,-267.292 dDocent_Contig_7710 27 . T G 69.0593 . AB=0.428571;ABP=3.32051;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=432;DPB=432;DPRA=0.0823529;EPP=9.52472;EPPR=917.281;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990676;PAO=0;PQA=0;PQR=0;PRO=0;QA=113;QR=17081;RO=429;RPL=0;RPP=9.52472;RPPR=934.572;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=427;SRP=917.281;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1395:0:0:0,-10.536,-125.806 0/0:182:182,0:182:7273:0:0:0,-54.7875,-654.199 0/0:87:87,0:87:3442:0:0:0,-26.1896,-309.807 0/0:105:105,0:105:4167:0:0:0,-31.6081,-375.003 0/1:7:4,3:4:163:3:113:-8.42881,0,-12.9512 0/0:16:16,0:16:641:0:0:0,-4.81648,-58.0253 dDocent_Contig_7711 52 . C T 4396.67 . AB=0.36758;ABP=69.7211;AC=5;AF=0.416667;AN=12;AO=165;CIGAR=1X;DP=498;DPB=498;DPRA=0;EPP=361.303;EPPR=723.939;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.7576;MQMR=59.2771;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6606;QR=13133;RO=332;RPL=165;RPP=361.303;RPPR=723.939;RPR=0;RUN=1;SAF=165;SAP=361.303;SAR=0;SRF=332;SRP=723.939;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:106:52,54:52:2048:54:2156:-161.852,0,-152.607 0/1:76:59,17:59:2327:17:685:-39.1017,0,-186.714 0/0:60:55,4:55:2162:4:163:0,-3.1113,-179.692 0/1:105:91,14:91:3617:14:557:-18.8642,0,-293.959 0/1:67:33,34:33:1327:34:1368:-103.206,0,-97.7691 0/1:84:42,42:42:1652:42:1677:-125.864,0,-122.39 dDocent_Contig_7712 1 . N G 77.8076 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_7713 107 . N C 103.49 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=104;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 dDocent_Contig_7714 7 . T C 2328.14 . AB=0.460317;ABP=5.59539;AC=6;AF=0.5;AN=12;AO=87;CIGAR=1X;DP=189;DPB=189;DPRA=0;EPP=191.928;EPPR=222.329;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.517241;PAIREDR=0.514851;PAO=0;PQA=0;PQR=0;PRO=0;QA=3319;QR=3795;RO=101;RPL=0;RPP=191.928;RPPR=222.329;RPR=87;RUN=1;SAF=87;SAP=191.928;SAR=0;SRF=101;SRP=222.329;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:9,21:9:344:21:814:-64.4413,0,-22.1588 0/1:49:27,22:27:999:22:833:-60.5388,0,-75.4675 0/1:18:9,9:9:348:9:319:-23.6238,0,-26.2617 0/1:26:13,13:13:483:13:504:-37.8822,0,-35.9828 0/1:29:18,11:18:678:11:420:-29.4212,0,-52.6219 0/1:36:25,11:25:943:11:429:-28.1286,0,-74.3445 dDocent_Contig_7715 8 . C T 6940.01 . AB=0.404025;ABP=54.6954;AC=6;AF=0.5;AN=12;AO=261;CIGAR=1X;DP=646;DPB=646;DPRA=0;EPP=569.765;EPPR=832.513;GTI=0;LEN=1;MEANALT=1.33333;MQM=59.6782;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.904215;PAIREDR=0.97644;PAO=0;PQA=0;PQR=0;PRO=0;QA=9984;QR=14594;RO=382;RPL=0;RPP=569.765;RPPR=832.513;RPR=261;RUN=1;SAF=261;SAP=569.765;SAR=0;SRF=382;SRP=832.513;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:65:47,18:47:1784:18:682:-42.145,0,-141.244 0/1:95:56,39:56:2128:39:1476:-104.509,0,-163.147 0/1:102:62,40:62:2375:40:1542:-107.801,0,-183.256 0/1:90:56,33:56:2142:33:1277:-88.1168,0,-165.916 0/1:148:86,60:86:3309:60:2286:-161.524,0,-253.614 0/1:146:75,71:75:2856:71:2721:-201.127,0,-213.26 dDocent_Contig_7716 30 . G A 1039.68 . AB=0.111111;ABP=62.1226;AC=0;AF=0;AN=12;AO=5;CIGAR=2M1X5M;DP=156;DPB=189;DPRA=2.14286;EPP=13.8677;EPPR=231.015;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.8;PAO=0;PQA=0;PQR=0;PRO=0;QA=200;QR=4153;RO=105;RPL=0;RPP=13.8677;RPPR=231.015;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=105;SRP=231.015;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:16:11,5,0:11:438:5,0:187,0:-12.3752,0,-34.9592,-15.6865,-36.4644,-51.7696 0|0:39:28,10,0:28:1104:10,0:350,0:-20.0787,0,-87.9009,-28.5076,-90.9112,-119.372 0|0:14:10,4,0:10:397:4,0:155,0:-10.1091,0,-31.8746,-13.1194,-33.0787,-45.8083 0|0:45:15,24,5:15:586:24,5:894,200:-68.6269,0,-40.9408,-56.6632,-31.6888,-103.338 0|0:17:17,0,0:17:674:0,0:0,0:0,-5.11751,-60.9939,-5.11751,-60.9939,-60.9939 0|0:25:24,1,0:24:954:1,0:41,0:0,-3.43118,-82.0713,-7.22472,-82.3723,-85.7569 dDocent_Contig_7717 34 . C T 2261.97 . AB=0.373541;ABP=38.7086;AC=5;AF=0.416667;AN=12;AO=98;CIGAR=1X;DP=321;DPB=321;DPRA=0;EPP=7.35324;EPPR=17.8211;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.734694;PAIREDR=0.717489;PAO=0;PQA=0;PQR=0;PRO=0;QA=3528;QR=8115;RO=223;RPL=0;RPP=215.815;RPPR=487.249;RPR=98;RUN=1;SAF=42;SAP=7.35324;SAR=56;SRF=92;SRP=17.8211;SRR=131;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:23,15:23:843:15:530:-36.5917,0,-64.7431 0/1:65:32,33:32:1115:33:1242:-92.4991,0,-81.0757 0/1:39:27,12:27:985:12:398:-24.3947,0,-77.2058 0/1:69:41,28:41:1489:28:1016:-70.9752,0,-113.504 0/1:46:38,8:38:1414:8:272:-10.9579,0,-113.685 0/0:64:62,2:62:2269:2:70:0,-12.6185,-197.782 dDocent_Contig_7718 26 . A G 164.15 . AB=0.216216;ABP=28.8919;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=113;DPB=113;DPRA=1.96491;EPP=22.5536;EPPR=228.843;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.625;PAO=0;PQA=0;PQR=0;PRO=0;QA=360;QR=4124;RO=104;RPL=0;RPP=22.5536;RPPR=228.843;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=104;SRP=228.843;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:11:11,0:11:414:0:0:0,-3.31133,-37.5999 0/0:20:20,0:20:790:0:0:0,-6.0206,-71.4181 0/0:10:10,0:10:402:0:0:0,-3.0103,-36.5396 0/0:16:16,0:16:630:0:0:0,-4.81648,-57.0356 0/1:37:29,8:29:1167:8:319:-17.9378,0,-94.1718 0/0:19:18,1:18:721:1:41:0,-1.625,-61.1218 dDocent_Contig_7719 96 . T G 877.836 . AB=0.32381;ABP=31.3222;AC=5;AF=0.416666;AN=12;AO=34;CIGAR=1M1X3M;DP=105;DPB=105.8;DPRA=0;EPP=76.8404;EPPR=131.127;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.705882;PAIREDR=0.830508;PAO=0;PQA=0;PQR=0;PRO=0;QA=1369;QR=2315;RO=59;RPL=0;RPP=76.8404;RPPR=131.127;RPR=34;RUN=1;SAF=0;SAP=76.8404;SAR=34;SRF=0;SRP=131.127;SRR=59;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:16:13,0,2,1:13:509:0,2,1:0,74,38:-2.13358,-6.04697,-47.9118,0,-41.8608,-41.2587,-2.92714,-44.7958,-38.7451,-44.4948 0|1:17:4,3,0,10:4:157:3,0,10:121,0,402:-31.9233,-23.1528,-35.1593,-33.1274,-36.0624,-46.0374,0,-2.92727,-12.9061,-9.89582 0|1:12:9,1,0,2:9:342:1,0,2:40,0,78:-3.69519,-3.10607,-30.8386,-6.40446,-31.1397,-34.4363,0,-24.7268,-28.0238,-27.4218 0|1:22:12,4,2,4:12:475:4,2,4:160,67,159:-9.57669,0,-37.9023,-7.77715,-33.6886,-46.267,-0.091153,-26.0138,-33.7787,-37.9923 0|1:26:15,0,0,11:15:592:0,0,11:0,0,447:-32.7587,-37.2742,-85.9772,-37.2742,-85.9772,-85.9772,0,-49.104,-49.104,-45.7926 0|1:12:6,0,0,6:6:240:0,0,6:0,0,245:-18.8171,-20.6233,-40.3892,-20.6233,-40.3892,-40.3892,0,-20.1696,-20.1696,-18.3635 dDocent_Contig_7720 16 . T C 112.006 . AB=0.25;ABP=13.8677;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=300;DPB=300;DPRA=0.357143;EPP=13.8677;EPPR=643.595;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9186;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.989831;PAO=0;PQA=0;PQR=0;PRO=0;QA=204;QR=11850;RO=295;RPL=0;RPP=13.8677;RPPR=643.595;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=295;SRP=643.595;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:50,0:50:1991:0:0:0,-15.0515,-179.382 0/0:85:85,0:85:3416:0:0:0,-25.5875,-307.476 0/0:73:73,0:73:2937:0:0:0,-21.9752,-264.309 0/0:56:56,0:56:2255:0:0:0,-16.8577,-203.105 0/0:16:16,0:16:648:0:0:0,-4.81648,-58.6535 0/1:20:15,5:15:603:5:204:-12.7234,0,-48.5865 dDocent_Contig_7721 61 . C A 220.254 . AB=0.173913;ABP=24.253;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=2M1I3M1X;DP=144;DPB=147.5;DPRA=5.02222;EPP=18.2106;EPPR=283.13;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=271;QR=5089;RO=129;RPL=7;RPP=18.2106;RPPR=283.13;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=129;SRP=283.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:68:65,0,2:65:2561:0,2:0,78:0,-19.5669,-230.255,-13.1686,-223.844,-223.242 0|1:23:19,0,4:19:739:0,4:0,155:-7.40034,-13.1199,-73.8508,0,-61.1182,-59.9141 0|0:4:4,0,0:4:157:0,0:0,0:0,-1.20412,-14.5079,-1.20412,-14.5079,-14.5079 0|0:22:21,0,1:21:833:0,1:0,38:0,-6.32163,-74.9081,-2.82539,-71.7923,-71.4913 0|0:11:11,0,0:11:445:0,0:0,0:0,-3.31133,-40.4063,-3.31133,-40.4063,-40.4063 0|1:16:9,7,0:9:354:7,0:248,0:-17.8468,0,-27.4057,-20.5561,-29.5129,-49.6979 dDocent_Contig_7722 11 . C T 148.627 . AB=0.241379;ABP=19.8579;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=251;DPB=251;DPRA=0.653153;EPP=18.2106;EPPR=532.85;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.6844;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.758197;PAO=0;PQA=0;PQR=0;PRO=0;QA=275;QR=9839;RO=244;RPL=0;RPP=18.2106;RPPR=532.85;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=244;SRP=532.85;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:1051:0:0:0,-7.82678,-94.8798 0/0:68:68,0:68:2750:0:0:0,-20.47,-247.603 0/0:50:50,0:50:2001:0:0:0,-15.0515,-178.563 0/0:53:53,0:53:2128:0:0:0,-15.9546,-189.896 0/1:29:22,7:22:891:7:275:-16.3856,0,-71.7665 0/0:25:25,0:25:1018:0:0:0,-7.52575,-91.9109 dDocent_Contig_7723 10 . T C 1213.63 . AB=0.375;ABP=19.2963;AC=5;AF=0.416667;AN=12;AO=45;CIGAR=1X;DP=140;DPB=140;DPRA=1.2;EPP=100.727;EPPR=209.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.844444;PAIREDR=0.821053;PAO=0;PQA=0;PQR=0;PRO=0;QA=1832;QR=3808;RO=95;RPL=0;RPP=100.727;RPPR=209.3;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=95;SRP=209.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:801:0:0:0,-6.0206,-72.4045 0/1:26:16,10:16:641:10:403:-28.8031,0,-50.1954 0/1:14:12,2:12:475:2:82:-3.56526,0,-38.8832 0/1:28:19,9:19:766:9:367:-24.9664,0,-60.8326 0/1:24:16,8:16:638:8:328:-22.6656,0,-50.5234 0/1:28:12,16:12:487:16:652:-50.5828,0,-35.7522 dDocent_Contig_7724 21 . A C 744.187 . AB=0.153846;ABP=16.5402;AC=0;AF=0;AN=12;AO=2;CIGAR=1X1M1X1M1X;DP=170;DPB=170;DPRA=0;EPP=7.35324;EPPR=278.787;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.976378;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=5005;RO=127;RPL=0;RPP=7.35324;RPPR=278.787;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=127;SRP=278.787;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:40:36,0,4,0:36:1415:0,4,0:0,162,0:-2.92576,-13.7628,-130.136,0,-116.777,-115.573,-13.7628,-130.136,-116.777,-130.136 0|0:50:36,0,13,0:36:1421:0,13,0:0,510,0:-31.0852,-41.9223,-158.843,0,-116.905,-112.991,-41.9223,-158.843,-116.905,-158.843 0|0:23:10,0,12,0:10:391:0,12,0:0,466,0:-33.9723,-36.9826,-69.1329,0,-32.128,-28.5157,-36.9826,-69.1329,-32.128,-69.1329 0|0:34:31,0,3,0:31:1222:0,3,0:0,119,0:-0.859995,-10.1919,-110.725,0,-100.929,-100.026,-10.1919,-110.725,-100.929,-110.725 0|0:13:7,2,4,0:7:276:2,4,0:81,161,0:-11.1605,-6.58769,-28.6877,0,-16.0174,-21.4948,-13.2677,-29.2897,-22.699,-35.9701 0|0:10:7,0,1,2:7:280:0,1,2:0,40,80:-4.48295,-6.59016,-29.6547,-3.29508,-26.3596,-26.0585,0,-23.0645,-19.7694,-22.4624 dDocent_Contig_7725 7 . T C 45.7104 . AB=0.1875;ABP=16.582;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=97;DPB=97;DPRA=0.987654;EPP=9.52472;EPPR=207.129;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.765957;PAO=0;PQA=0;PQR=0;PRO=0;QA=117;QR=3598;RO=94;RPL=0;RPP=9.52472;RPPR=207.129;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=94;SRP=207.129;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:685:0:0:0,-5.41854,-61.9809 0/0:24:24,0:24:921:0:0:0,-7.22472,-83.2072 0/1:16:13,3:13:493:3:117:-6.0939,0,-39.8989 0/0:18:18,0:18:689:0:0:0,-5.41854,-62.3441 0/0:6:6,0:6:232:0:0:0,-1.80618,-21.2489 0/0:15:15,0:15:578:0:0:0,-4.51545,-52.3616 dDocent_Contig_7726 13 . C T 651.758 . AB=0.254545;ABP=60.5741;AC=3;AF=0.25;AN=12;AO=29;CIGAR=1X;DP=189;DPB=189;DPRA=1.35294;EPP=65.983;EPPR=350.446;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.9875;PAO=0;PQA=0;PQR=0;PRO=0;QA=1178;QR=6434;RO=160;RPL=0;RPP=65.983;RPPR=350.446;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=160;SRP=350.446;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:60:48,12:48:1919:12:487:-26.1195,0,-154.847 0/1:28:18,10:18:734:10:405:-28.3807,0,-57.9533 0/1:22:16,6:16:650:6:246:-15.8975,0,-52.2098 0/0:28:27,1:27:1091:1:40:0,-4.43316,-94.4793 0/0:35:35,0:35:1407:0:0:0,-10.536,-126.883 0/0:16:16,0:16:633:0:0:0,-4.81648,-57.3019 dDocent_Contig_7727 46 . G A 58784.8 . AB=0.760425;ABP=1443.92;AC=6;AF=0.5;AN=12;AO=1860;CIGAR=1X;DP=2446;DPB=2446;DPRA=0;EPP=4024.6;EPPR=1273.32;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=73678;QR=23163;RO=585;RPL=2;RPP=4024.6;RPPR=1273.32;RPR=1858;RUN=1;SAF=1860;SAP=4041.95;SAR=0;SRF=585;SRP=1273.32;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:257:34,223:34:1349:223:8833:-717.125,0,-44.3078 0/1:278:108,170:108:4235:170:6689:-518.049,0,-297.43 0/1:343:168,175:168:6687:175:6953:-522.208,0,-498.284 0/1:390:106,284:106:4220:284:11239:-893.398,0,-262.374 0/1:520:106,414:106:4171:414:16318:-1310.82,0,-218.839 0/1:658:63,594:63:2501:594:23646:-1928.1,0,-27.2102 dDocent_Contig_7729 42 . T C 1727.69 . AB=0.349462;ABP=39.6218;AC=5;AF=0.416667;AN=12;AO=66;CIGAR=1X;DP=217;DPB=217;DPRA=0;EPP=146.327;EPPR=330.903;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.575758;PAIREDR=0.768212;PAO=0;PQA=0;PQR=0;PRO=0;QA=2666;QR=6057;RO=151;RPL=0;RPP=146.327;RPPR=330.903;RPR=66;RUN=1;SAF=66;SAP=146.327;SAR=0;SRF=151;SRP=330.903;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:5,19:5:204:19:772:-62.5744,0,-11.5193 0/1:53:41,12:41:1655:12:477:-27.3254,0,-133.218 0/1:34:28,6:28:1132:6:241:-11.8317,0,-91.9261 0/1:50:31,19:31:1236:19:768:-54.3896,0,-96.4569 0/1:25:16,9:16:624:9:367:-25.8695,0,-48.9654 0/0:31:30,1:30:1206:1:41:0,-5.23736,-104.72 dDocent_Contig_7730 12 . C T 16815 . AB=0.703412;ABP=276.867;AC=6;AF=0.5;AN=12;AO=536;CIGAR=1X2M1X;DP=762;DPB=762;DPRA=0;EPP=1166.92;EPPR=419.933;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.962687;PAIREDR=0.46875;PAO=0;PQA=0;PQR=0;PRO=0;QA=21262;QR=7600;RO=192;RPL=0;RPP=1166.92;RPPR=419.933;RPR=536;RUN=1;SAF=536;SAP=1166.92;SAR=0;SRF=192;SRP=419.933;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:67:26,36,5:26:1014:36,5:1436,204:-110.423,0,-72.4885,-101.418,-66.4913,-183.249 0|1:133:35,92,6:35:1362:92,6:3682,245:-292.772,0,-84.2118,-283.092,-91.6883,-393.205 0|1:70:13,54,3:13:519:54,3:2116,120:-170.066,0,-26.4886,-164.093,-32.859,-205.937 0|1:218:41,158,19:41:1638:158,19:6265,770:-503.328,0,-87.3485,-452.174,-71.4148,-581.371 0|1:144:35,108,0:35:1388:108,0:4288,0:-342.448,0,-81.7404,-352.984,-114.252,-467.239 0|1:130:42,88,0:42:1679:88,0:3475,0:-273.682,0,-112.21,-286.325,-138.701,-424.628 dDocent_Contig_7731 16 . A G 606.519 . AB=0.186567;ABP=117.353;AC=4;AF=0.333333;AN=12;AO=31;CIGAR=1X;DP=366;DPB=366;DPRA=1.05085;EPP=70.3259;EPPR=730.454;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.516129;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1228;QR=13238;RO=335;RPL=0;RPP=70.3259;RPPR=730.454;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=335;SRP=730.454;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:116:101,15:101:4017:15:591:-18.6055,0,-326.606 0/0:110:108,2:108:4254:2:82:0,-25.3336,-375.069 0/0:67:67,0:67:2624:0:0:0,-20.169,-236.304 0/0:51:51,0:51:2032:0:0:0,-15.3525,-183.074 1/1:4:0,4:0:0:4:157:-14.5079,-1.20412,0 0/1:18:8,10:8:311:10:398:-30.7603,0,-22.9307 dDocent_Contig_7732 7 . T A 235.939 . AB=0.175;ABP=76.4061;AC=2;AF=0.166667;AN=12;AO=18;CIGAR=1X1M;DP=292;DPB=292;DPRA=1.15909;EPP=42.0968;EPPR=578.45;GTI=0;LEN=1;MEANALT=1.5;MQM=57.7778;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=684;QR=10111;RO=265;RPL=0;RPP=42.0968;RPPR=578.45;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=265;SRP=578.45;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:52:51,0,0:51:1950:0,0:0,0:0,-15.3525,-175.473,-15.3525,-175.473,-175.473 0|1:28:14,7,7:14:539:7,7:268,266:-17.7704,0,-42.1528,-0.181908,-22.4574,-42.3328 0|0:36:36,0,0:36:1387:0,0:0,0:0,-10.8371,-125.113,-10.8371,-125.113,-125.113 0|0:74:72,1,1:72:2741:1,1:38,35:0,-18.5439,-243.099,-18.8481,-240.559,-243.373 0|0:50:47,0,3:47:1792:0,3:0,113:0,-14.1484,-161.158,-4.51625,-151.903,-151 0|1:52:45,0,7:45:1702:0,7:0,270:-9.00023,-22.5466,-162.054,0,-139.892,-137.785 dDocent_Contig_7733 18 . C A 167.475 . AB=0.0869565;ABP=37.093;AC=0;AF=0;AN=12;AO=2;CIGAR=2X;DP=171;DPB=171;DPRA=0.758242;EPP=7.35324;EPPR=337.417;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.5;PAIREDR=0.655844;PAO=0;PQA=0;PQR=0;PRO=0;QA=80;QR=5944;RO=154;RPL=0;RPP=7.35324;RPPR=337.417;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=154;SRP=337.417;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:23:22,0,0:22:854:0,0:0,0:0,-6.62266,-77.061,-6.62266,-77.061,-77.061 0|0:26:23,0,3:23:903:0,3:0,117:-3.08251,-10.0062,-84.2728,0,-74.6566,-73.7535 0|0:31:24,0,7:24:948:0,7:0,260:-14.4145,-21.6393,-99.6641,0,-78.4012,-76.294 0|0:23:18,2,3:18:678:2,3:80,120:-4.46612,-3.29449,-58.2175,0,-48.9315,-54.6209 0|0:31:31,0,0:31:1177:0,0:0,0:0,-9.33193,-106.212,-9.33193,-106.212,-106.212 0|0:37:36,0,0:36:1384:0,0:0,0:0,-10.8371,-124.557,-10.8371,-124.557,-124.557 dDocent_Contig_7734 61 . C A 422.364 . AB=0.28169;ABP=32.4016;AC=2;AF=0.166667;AN=12;AO=24;CIGAR=1X;DP=309;DPB=309;DPRA=0.697674;EPP=55.1256;EPPR=621.88;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.416667;PAIREDR=0.621053;PAO=0;PQA=0;PQR=0;PRO=0;QA=865;QR=11141;RO=285;RPL=14;RPP=4.45795;RPPR=50.5617;RPR=10;RUN=1;SAF=14;SAP=4.45795;SAR=10;SRF=182;SRP=50.5617;SRR=103;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:53:40,13:40:1571:13:480:-27.5799,0,-125.684 0/0:56:53,3:53:2041:3:122:0,-5.48519,-172.516 0/1:18:11,7:11:405:7:255:-17.8783,0,-31.3617 0/0:53:52,1:52:2031:1:8:0,-15.1546,-182.19 0/0:27:27,0:27:1066:0:0:0,-8.12781,-96.2289 0/0:102:102,0:102:4027:0:0:0,-30.7051,-362.452 dDocent_Contig_7735 9 . T C 2258.1 . AB=0.320423;ABP=82.5596;AC=3;AF=0.25;AN=12;AO=99;CIGAR=1X;DP=540;DPB=540;DPRA=1.66207;EPP=217.986;EPPR=960.63;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.858586;PAIREDR=0.820862;PAO=0;PQA=0;PQR=0;PRO=0;QA=3815;QR=16817;RO=441;RPL=0;RPP=217.986;RPPR=960.63;RPR=99;RUN=1;SAF=99;SAP=217.986;SAR=0;SRF=441;SRP=960.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:74:69,5:69:2607:5:195:0,-4.35202,-216.904 0/1:111:97,14:97:3722:14:545:-15.982,0,-301.677 0/0:58:58,0:58:2214:0:0:0,-17.4597,-199.485 0/0:124:121,3:121:4620:3:113:0,-26.7887,-405.306 0/1:67:49,18:49:1866:18:693:-42.5344,0,-148.021 0/1:106:47,59:47:1788:59:2269:-172.516,0,-129.265 dDocent_Contig_7736 13 . G T 1467.77 . AB=0.333333;ABP=44.9921;AC=6;AF=0.5;AN=12;AO=58;CIGAR=1X;DP=174;DPB=174;DPRA=0;EPP=128.956;EPPR=252.73;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.465517;PAIREDR=0.765217;PAO=0;PQA=0;PQR=0;PRO=0;QA=2315;QR=4583;RO=115;RPL=0;RPP=128.956;RPPR=252.73;RPR=58;RUN=1;SAF=58;SAP=128.956;SAR=0;SRF=115;SRP=252.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:15,10:15:572:10:399:-28.7425,0,-44.2777 0/1:32:25,7:25:1003:7:282:-16.1196,0,-80.9306 0/1:13:8,5:8:321:5:181:-12.7272,0,-25.3429 0/1:48:21,27:21:830:27:1090:-83.9358,0,-60.5606 0/1:19:14,5:14:572:5:202:-12.8419,0,-46.102 0/1:37:32,4:32:1285:4:161:-3.63043,0,-104.666 dDocent_Contig_7737 28 . T C 30.4217 . AB=0.136364;ABP=28.2783;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=223;DPB=223;DPRA=0.670659;EPP=13.8677;EPPR=476.391;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.866972;PAO=0;PQA=0;PQR=0;PRO=0;QA=199;QR=8704;RO=218;RPL=0;RPP=13.8677;RPPR=476.391;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=218;SRP=476.391;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:37,0:37:1466:0:0:0,-11.1381,-132.187 0/0:50:50,0:50:1987:0:0:0,-15.0515,-179.025 0/1:22:19,3:19:757:3:120:-4.56465,0,-61.83 0/0:34:32,2:32:1294:2:79:0,-2.73778,-109.227 0/0:56:56,0:56:2258:0:0:0,-16.8577,-203.378 0/0:24:24,0:24:942:0:0:0,-7.22472,-85.0781 dDocent_Contig_7738 27 . A T 141.589 . AB=0.173913;ABP=45.4956;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=199;DPB=199;DPRA=1.50327;EPP=20.3821;EPPR=417.762;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.875;PAIREDR=0.670157;PAO=0;PQA=0;PQR=0;PRO=0;QA=324;QR=7515;RO=191;RPL=0;RPP=20.3821;RPPR=417.762;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=191;SRP=417.762;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1111:0:0:0,-8.42884,-100.276 0/0:59:59,0:59:2328:0:0:0,-17.7608,-209.684 0/0:13:13,0:13:512:0:0:0,-3.91339,-46.4272 0/0:21:21,0:21:802:0:0:0,-6.32163,-72.4904 0/0:32:32,0:32:1260:0:0:0,-9.63296,-113.675 0/1:46:38,8:38:1502:8:324:-15.6818,0,-121.579 dDocent_Contig_7739 98 . N T 68.3696 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=59;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=72;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:72:-6.83588,-0.60206,0 dDocent_Contig_7740 1 . N G 1304.87 . AB=0.358974;ABP=9.74743;AC=12;AF=1;AN=12;AO=24;CIGAR=1X4M;DP=49;DPB=49;DPRA=0;EPP=55.1256;EPPR=0;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=0;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=799;QR=0;RO=0;RPL=0;RPP=55.1256;RPPR=0;RPR=24;RUN=1;SAF=0;SAP=55.1256;SAR=24;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:8:0,3,5:0:0:3,5:99,162:-21.4017,-13.395,-12.4919,-8.33431,0,-6.82916 1|1:6:0,4,2:0:0:4,2:130,64:-15.9724,-5.47631,-4.27219,-10.8177,0,-10.2156 1|1:2:0,0,2:0:0:0,2:0,70:-6.6474,-6.6474,-6.6474,-0.60206,-0.60206,0 1|1:25:0,18,7:0:0:18,7:589,235:-66.9423,-19.3717,-13.9532,-47.9039,0,-45.7967 1|1:1:0,0,1:0:0:0,1:0,29:-2.89966,-2.89966,-2.89966,-0.30103,-0.30103,0 1|1:7:0,0,7:0:0:0,7:0,239:-21.8436,-21.8436,-21.8436,-2.10721,-2.10721,0 dDocent_Contig_7741 8 . C T 45.8572 . AB=0.111111;ABP=109.412;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=208;DPB=208;DPRA=1.1;EPP=33.4109;EPPR=422.104;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994819;PAO=0;PQA=0;PQR=0;PRO=0;QA=543;QR=7445;RO=193;RPL=0;RPP=33.4109;RPPR=422.104;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=193;SRP=422.104;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:24,3:24:935:3:117:-2.39291,0,-75.9482 0/0:31:31,0:31:1188:0:0:0,-9.33193,-107.215 0/0:36:33,3:33:1279:3:115:0,-0.112051,-104.674 0/0:26:24,2:24:909:2:78:0,-0.423307,-74.7194 0/1:53:47,6:47:1821:6:233:-5.38549,0,-148.183 0/0:34:34,0:34:1313:0:0:0,-10.235,-118.457 dDocent_Contig_7742 111 . A G 76.2021 . AB=0.227273;ABP=31.4368;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1M1I1X2M1X;DP=99;DPB=102;DPRA=3.76;EPP=35.5824;EPPR=174.557;GTI=0;LEN=1;MEANALT=1.6;MQM=25.3333;MQMR=59.6076;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.974684;PAO=0;PQA=0;PQR=0;PRO=0;QA=508;QR=2621;RO=79;RPL=0;RPP=35.5824;RPPR=174.557;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=0;SRP=174.557;SRR=79;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:5:4,0:4:111:0:0:0,-1.20412,-10.0263 0|0:12:11,1:11:373:1:22:0,-1.55712,-31.8427 0|0:26:23,2:23:774:2:70:0,-2.9537,-65.1203 0|0:12:10,2:10:329:2:70:0,-0.0225763,-26.3395 0|1:25:19,5:19:651:5:171:-4.44993,0,-51.4042 0|1:19:12,5:12:383:5:175:-6.39113,0,-29.4443 dDocent_Contig_7743 47 . C T 1222.68 . AB=0.199367;ABP=251.08;AC=2;AF=0.166667;AN=12;AO=64;CIGAR=1X;DP=395;DPB=395;DPRA=13.1071;EPP=141.985;EPPR=721.768;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.953125;PAIREDR=0.969789;PAO=0;PQA=0;PQR=0;PRO=0;QA=2483;QR=13017;RO=331;RPL=0;RPP=141.985;RPPR=721.768;RPR=64;RUN=1;SAF=64;SAP=141.985;SAR=0;SRF=331;SRP=721.768;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:13:13,0:13:516:0:0:0,-3.91339,-46.7881 0/0:51:50,1:50:1981:1:38:0,-11.5553,-174.699 0/0:10:10,0:10:390:0:0:0,-3.0103,-35.4555 0/0:5:5,0:5:198:0:0:0,-1.50515,-18.1958 0/1:168:144,24:144:5646:24:920:-32.5313,0,-457.444 0/1:148:109,39:109:4286:39:1525:-92.9585,0,-341.185 dDocent_Contig_7745 1 . N G 102.591 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=110;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:110:-10.2585,-0.90309,0 dDocent_Contig_7746 94 . A G 506.191 . AB=0.21118;ABP=119.663;AC=3;AF=0.3;AN=10;AO=34;CIGAR=1X;DP=260;DPB=260;DPRA=1.08418;EPP=76.8404;EPPR=493.763;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1149;QR=7610;RO=226;RPL=34;RPP=76.8404;RPPR=493.763;RPR=0;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=226;SRP=493.763;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:76:57,19:57:1895:19:640:-35.0388,0,-147.951 0/0:92:92,0:92:3097:0:0:0,-27.6948,-278.97 0/1:36:30,6:30:1012:6:198:-7.30656,0,-80.5502 0/1:49:40,9:40:1371:9:311:-13.5748,0,-108.939 ./.:.:.:.:.:.:.:. 0/0:7:7,0:7:235:0:0:0,-2.10721,-21.4791 dDocent_Contig_7747 52 . T C 50.3314 . AB=0.1875;ABP=16.582;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=127;DPB=127;DPRA=0.720721;EPP=9.52472;EPPR=272.273;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=8.67362e-19;PAIRED=0.333333;PAIREDR=0.758065;PAO=0;PQA=0;PQR=0;PRO=0;QA=122;QR=4962;RO=124;RPL=3;RPP=9.52472;RPPR=272.273;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=124;SRP=272.273;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:877:0:0:0,-6.62266,-79.2369 0/0:34:34,0:34:1374:0:0:0,-10.235,-123.913 0/0:18:18,0:18:731:0:0:0,-5.41854,-66.114 0/0:28:28,0:28:1129:0:0:0,-8.42884,-101.891 0/1:16:13,3:13:499:3:122:-6.55601,0,-40.4358 0/0:9:9,0:9:352:0:0:0,-2.70927,-32.0373 dDocent_Contig_7748 57 . A T 1490.18 . AB=0.225589;ABP=197.266;AC=3;AF=0.25;AN=12;AO=69;CIGAR=1X;DP=403;DPB=403;DPRA=2.80328;EPP=152.842;EPPR=728.282;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.991018;PAO=0;PQA=0;PQR=0;PRO=0;QA=2779;QR=12951;RO=334;RPL=69;RPP=152.842;RPPR=728.282;RPR=0;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=334;SRP=728.282;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:2:2,0:2:82:0:0:0,-0.60206,-7.77968 0/0:59:59,0:59:2279:0:0:0,-17.7608,-205.285 0/0:45:43,2:43:1669:2:82:0,-5.76667,-142.667 0/1:32:14,18:14:557:18:715:-55.0419,0,-40.8377 0/1:129:110,19:110:4274:19:763:-30.1595,0,-345.818 0/1:136:106,30:106:4090:30:1219:-69.0384,0,-327.158 dDocent_Contig_7749 107 . N T 935.851 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=29;CIGAR=1X;DP=29;DPB=29;DPRA=0;EPP=65.983;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1029;QR=0;RO=0;RPL=0;RPP=65.983;RPPR=0;RPR=29;RUN=1;SAF=0;SAP=65.983;SAR=29;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:36:-3.59827,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:28:0,28:0:0:28:993:-89.6847,-8.42884,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_7750 15 . C G 7957.43 . AB=0.710407;ABP=87.9925;AC=3;AF=0.25;AN=12;AO=157;CIGAR=1X3M1X;DP=392;DPB=392;DPRA=1.27011;EPP=343.931;EPPR=270.101;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.980892;PAIREDR=0.96748;PAO=0;PQA=0;PQR=0;PRO=0;QA=6007;QR=4820;RO=123;RPL=0;RPP=343.931;RPPR=270.101;RPR=157;RUN=1;SAF=157;SAP=343.931;SAR=0;SRF=123;SRP=270.101;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:55:42,0,13:42:1657:0,13:0,523:-30.8596,-43.5028,-179.829,0,-136.726,-132.812 0|1:94:13,79,2:13:497:79,2:3024,81:-244.2,0,-16.973,-241.434,-34.0722,-281.605 0|1:63:20,42,0:20:789:42,0:1595,0:-124.949,0,-52.4668,-130.97,-65.11,-195.892 0|1:64:15,36,13:15:578:36,13:1388,520:-109.441,0,-36.6109,-71.1213,-4.60968,-114.664 0|0:33:33,0,0:33:1299:0,0:0,0:0,-9.93399,-117.186,-9.93399,-117.186,-117.186 0|0:83:0,0,82:0:0:0,82:0,3265:-293.514,-293.514,-293.514,-24.6845,-24.6845,0 dDocent_Contig_7751 24 . G C 80.2396 . AB=0.0956938;ABP=299.754;AC=2;AF=0.166667;AN=12;AO=28;CIGAR=1X;DP=594;DPB=594;DPRA=1.03886;EPP=63.8115;EPPR=1229.89;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8248;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.969912;PAO=0;PQA=0;PQR=0;PRO=0;QA=1117;QR=22397;RO=565;RPL=0;RPP=63.8115;RPPR=1229.89;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=565;SRP=1229.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:82:74,8:74:2959:8:326:-5.02541,0,-241.09 0/1:127:115,12:115:4594:12:490:-6.22033,0,-375.133 0/0:94:91,3:91:3611:3:121:0,-17.0166,-313.731 0/0:98:93,5:93:3641:5:180:0,-12.9548,-311.166 0/0:104:104,0:104:4110:0:0:0,-31.3071,-368.605 0/0:89:88,0:88:3482:0:0:0,-26.4906,-311.841 dDocent_Contig_7752 8 . C T 606.493 . AB=0.148867;ABP=333.924;AC=4;AF=0.333333;AN=12;AO=51;CIGAR=1X;DP=447;DPB=447;DPRA=0;EPP=113.755;EPPR=862.913;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.977273;PAO=0;PQA=0;PQR=0;PRO=0;QA=1966;QR=15130;RO=396;RPL=0;RPP=113.755;RPPR=862.913;RPR=51;RUN=1;SAF=51;SAP=113.755;SAR=0;SRF=396;SRP=862.913;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:46:40,6:40:1533:6:231:-7.31029,0,-124.392 0/1:96:84,12:84:3202:12:463:-13.1224,0,-259.43 0/1:73:60,13:60:2306:13:505:-23.8239,0,-185.779 0/1:94:79,15:79:3031:15:573:-23.6145,0,-244.654 0/0:67:66,1:66:2485:1:38:0,-16.3717,-220.057 0/0:71:67,4:67:2573:4:156:0,-6.95584,-217.343 dDocent_Contig_7753 95 . A C 7914.67 . AB=0.443843;ABP=23.2529;AC=5;AF=0.416667;AN=12;AO=328;CIGAR=1X;DP=744;DPB=744;DPRA=29.56;EPP=715.253;EPPR=906.343;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11338;QR=14092;RO=416;RPL=328;RPP=715.253;RPPR=906.343;RPR=0;RUN=1;SAF=328;SAP=715.253;SAR=0;SRF=416;SRP=906.343;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:297:126,171:126:4234:171:5906:-442.283,0,-291.858 0/1:143:123,20:123:4223:20:696:-19.9169,0,-337.231 0/1:98:15,83:15:498:83:2874:-229.408,0,-15.6358 0/1:181:129,52:129:4344:52:1792:-107.079,0,-336.677 0/0:5:5,0:5:171:0:0:0,-1.50515,-15.7266 0/1:20:18,2:18:622:2:70:-0.626796,0,-50.2841 dDocent_Contig_7754 8 . C T 2526.51 . AB=0.387097;ABP=30.4689;AC=2;AF=0.166667;AN=12;AO=96;CIGAR=1X;DP=531;DPB=531;DPRA=1.75265;EPP=211.472;EPPR=947.601;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993103;PAO=0;PQA=0;PQR=0;PRO=0;QA=3667;QR=16719;RO=435;RPL=0;RPP=211.472;RPPR=947.601;RPR=96;RUN=1;SAF=96;SAP=211.472;SAR=0;SRF=435;SRP=947.601;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:58:58,0:58:2206:0:0:0,-17.4597,-198.761 0/0:71:71,0:71:2739:0:0:0,-21.3731,-246.69 0/0:63:63,0:63:2448:0:0:0,-18.9649,-220.519 0/0:91:91,0:91:3489:0:0:0,-27.3937,-314.14 0/1:150:92,58:92:3537:58:2208:-153.788,0,-273.297 0/1:98:60,38:60:2300:38:1459:-102.085,0,-177.713 dDocent_Contig_7755 13 . T C 152.944 . AB=0.318182;ABP=9.32731;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=2X3M1X;DP=53;DPB=53;DPRA=1.41935;EPP=18.2106;EPPR=102.898;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.956522;PAO=0;PQA=0;PQR=0;PRO=0;QA=271;QR=1784;RO=46;RPL=0;RPP=18.2106;RPPR=102.898;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=46;SRP=102.898;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:6:6,0:6:239:0:0:0,-1.80618,-21.8852 0|0:4:4,0:4:158:0:0:0,-1.20412,-14.6005 0|0:13:13,0:13:505:0:0:0,-3.91339,-45.7946 0|0:8:8,0:8:310:0:0:0,-2.40824,-28.2614 0|1:12:8,4:8:299:4:157:-10.8964,0,-23.647 0|1:10:7,3:7:273:3:114:-7.61979,0,-21.9264 dDocent_Contig_7756 10 . C G 404.29 . AB=0.047619;ABP=152.325;AC=0;AF=0;AN=12;AO=4;CIGAR=6M1X1M;DP=488;DPB=478;DPRA=0.577982;EPP=11.6962;EPPR=967.144;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.5;PAIREDR=0.995495;PAO=0;PQA=0;PQR=0;PRO=0;QA=162;QR=17088;RO=444;RPL=0;RPP=11.6962;RPPR=967.144;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=444;SRP=967.144;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:77:77,0,0:77:2966:0,0:0,0:0,-23.1793,-267.108,-23.1793,-267.108,-267.108 0|0:23:14,7,2:14:540:7,2:243,80:-15.4971,0,-42.2261,-13.1096,-37.7414,-56.8789 0|0:61:53,6,2:53:2036:6,2:222,82:-2.17775,0,-165.308,-11.3543,-160.345,-177.904 0|0:34:34,0,0:34:1307:0,0:0,0:0,-10.235,-117.919,-10.235,-117.919,-117.919 0|0:186:160,26,0:160:6150:26,0:929,0:-27.9304,0,-497.443,-76.0952,-505.27,-581.004 0|0:107:106,1,0:106:4089:1,0:37,0:0,-28.5124,-364.395,-31.9092,-364.696,-367.723 dDocent_Contig_7757 33 . C T 121.036 . AB=0.294118;ABP=9.26925;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=115;DPB=115;DPRA=1.65079;EPP=18.2106;EPPR=237.529;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=286;QR=4324;RO=108;RPL=0;RPP=18.2106;RPPR=237.529;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=108;SRP=237.529;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:11:11,0:11:434:0:0:0,-3.31133,-39.4074 0/1:17:12,5:12:481:5:204:-13.6265,0,-38.5225 0/0:35:33,2:33:1321:2:82:0,-2.75637,-111.367 0/0:17:17,0:17:683:0:0:0,-5.11751,-61.8003 0/0:22:22,0:22:885:0:0:0,-6.62266,-79.9586 0/0:13:13,0:13:520:0:0:0,-3.91339,-47.1469 dDocent_Contig_7758 9 . T C 94.4692 . AB=0.0967742;ABP=440.807;AC=2;AF=0.166667;AN=12;AO=48;CIGAR=1X;DP=890;DPB=890;DPRA=0;EPP=107.241;EPPR=1829.22;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.985731;PAO=0;PQA=0;PQR=0;PRO=0;QA=1870;QR=32312;RO=841;RPL=0;RPP=107.241;RPPR=1829.22;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=841;SRP=1829.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:140:137,3:137:5273:3:117:0,-31.2338,-463.651 0/0:184:180,4:180:6903:4:156:0,-40.9722,-606.73 0/0:86:83,2:83:3191:2:78:0,-18.5737,-279.938 0/0:170:161,9:161:6196:9:350:0,-19.3137,-525.695 0/1:186:167,19:167:6440:19:740:-10.9394,0,-523.515 0/1:124:113,11:113:4309:11:429:-1.63793,0,-350.552 dDocent_Contig_7759 95 . A C 217.138 . AB=0;ABP=0;AC=2;AF=0.5;AN=4;AO=3;CIGAR=1X2M2X;DP=7;DPB=8.4;DPRA=0.75;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=3.5;PRO=0.5;QA=101;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:3:0,3,0:0:0:3,0:101,0:-9.42377,-0.90309,0,-9.42377,-0.90309,-9.42377 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 0|0:4:0,0,4:0:0:0,4:0,130:-11.9882,-11.9882,-11.9882,-1.20412,-1.20412,0 .:.:.:.:.:.:.:. dDocent_Contig_7760 20 . G A 33685.8 . AB=0.5071;ABP=3.96623;AC=7;AF=0.583333;AN=12;AO=1107;CIGAR=1X3M;DP=2183;DPB=2183;DPRA=0;EPP=2406.83;EPPR=1881.33;GTI=0;LEN=1;MEANALT=3.66667;MQM=60;MQMR=59.9514;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.998844;PAO=0;PQA=0;PQR=0;PRO=0;QA=43857;QR=33885;RO=865;RPL=0;RPP=2406.83;RPPR=1881.33;RPR=1107;RUN=1;SAF=1107;SAP=2406.83;SAR=0;SRF=865;SRP=1881.33;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:254:94,13,18,128:94:3717:13,18,128:511,714,5112:-392.728,-378.994,-680.959,-362.25,-626.098,-662.71,0,-263.85,-247.106,-267.349 1|1:370:76,85,28,179:76:2994:85,28,179:3364,1091,7082:-590.481,-336.504,-557.219,-523.697,-493.144,-761.57,-30.5538,0,-187.195,-222.973 0|1:269:103,1,5,160:103:4017:1,5,160:41,201,6371:-493.575,-521.197,-851.042,-508.017,-834.779,-836.658,0,-326.753,-313.572,-281.972 0|1:359:175,28,15,140:175:6872:28,15,140:1087,595,5477:-397.571,-360.945,-917.681,-401.272,-877.131,-961.922,0,-475.859,-516.186,-523.021 0|1:397:142,0,1,253:142:5542:0,1,253:0,17,10004:-780.586,-823.332,-1278.87,-822.104,-1277.64,-1277.34,0,-455.654,-454.426,-379.493 0|1:534:275,0,0,247:275:10743:0,0,247:0,0,9811:-724.864,-807.648,-1690.19,-807.648,-1690.19,-1690.19,0,-882.528,-882.528,-808.174 dDocent_Contig_7761 14 . C T 16788.4 . AB=0.0678914;ABP=2033.52;AC=1;AF=0.0833333;AN=12;AO=85;CIGAR=1X1M1X;DP=1944;DPB=1944;DPRA=0;EPP=187.585;EPPR=2671.75;GTI=0;LEN=1;MEANALT=2.25;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3304;QR=48880;RO=1229;RPL=0;RPP=187.585;RPPR=2671.75;RPR=85;RUN=1;SAF=85;SAP=187.585;SAR=0;SRF=1229;SRP=2671.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:223:137,45,41:137:5442:45,41:1740,1606:-101.669,0,-434.456,-10.8684,-315.965,-446.532 0|0:362:241,3,118:241:9599:3,118:118,4736:-317.678,-380.519,-1169.99,0,-780.673,-754.858 0|0:384:277,19,87:277:11005:19,87:743,3431:-198.892,-221.19,-1121.44,0,-844.896,-879.793 0|0:283:194,18,71:194:7734:18,71:703,2839:-175.456,-176.067,-807.521,0,-579.09,-615.507 0|0:304:159,0,142:159:6320:0,142:0,5683:-420.251,-468.114,-988.414,0,-520.288,-477.542 0|0:388:221,0,165:221:8780:0,165:0,6589:-476.112,-542.64,-1265.44,0,-722.788,-673.118 dDocent_Contig_7762 30 . A G 118.216 . AB=0.13253;ABP=100.36;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=470;DPB=470;DPRA=1.07235;EPP=26.8965;EPPR=999.716;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.960784;PAO=0;PQA=0;PQR=0;PRO=0;QA=422;QR=17645;RO=459;RPL=0;RPP=26.8965;RPPR=999.716;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=459;SRP=999.716;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:79:79,0:79:3049:0:0:0,-23.7814,-274.534 0/0:95:95,0:95:3648:0:0:0,-28.5978,-328.378 0/0:56:56,0:56:2133:0:0:0,-16.8577,-192.171 0/0:89:89,0:89:3437:0:0:0,-26.7917,-309.412 0/1:83:72,11:72:2797:11:422:-13.3445,0,-226.888 0/0:68:68,0:68:2581:0:0:0,-20.47,-232.458 dDocent_Contig_7763 15 . C T 88.4776 . AB=0.134615;ABP=63.3104;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=352;DPB=352;DPRA=0.866667;EPP=18.2106;EPPR=752.168;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=285;QR=13909;RO=345;RPL=0;RPP=18.2106;RPPR=752.168;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=345;SRP=752.168;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:50,0:50:1993:0:0:0,-15.0515,-179.556 0/0:36:36,0:36:1460:0:0:0,-10.8371,-131.643 0/0:47:47,0:47:1901:0:0:0,-14.1484,-171.281 0/0:68:68,0:68:2749:0:0:0,-20.47,-247.509 0/1:52:45,7:45:1798:7:285:-10.3706,0,-146.365 0/0:99:99,0:99:4008:0:0:0,-29.802,-360.679 dDocent_Contig_7764 11 . G T 50.1524 . AB=0.137931;ABP=36.0317;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=160;DPB=160;DPRA=1.04762;EPP=13.8677;EPPR=339.589;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.716129;PAO=0;PQA=0;PQR=0;PRO=0;QA=203;QR=6188;RO=155;RPL=0;RPP=13.8677;RPPR=339.589;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=155;SRP=339.589;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:29:25,4:25:998:4:162:-6.23709,0,-81.3871 0/0:26:25,1:25:993:1:41:0,-3.73221,-85.5701 0/0:21:21,0:21:852:0:0:0,-6.32163,-76.991 0/0:32:32,0:32:1279:0:0:0,-9.63296,-115.375 0/0:25:25,0:25:1022:0:0:0,-7.52575,-92.269 0/0:27:27,0:27:1044:0:0:0,-8.12781,-94.2406 dDocent_Contig_7765 60 . T C 73.2427 . AB=0.0967742;ABP=221.909;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=566;DPB=566;DPRA=1.88564;EPP=35.5824;EPPR=1199.49;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=613;QR=22041;RO=551;RPL=15;RPP=35.5824;RPPR=1199.49;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=551;SRP=1199.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:892:0:0:0,-6.92369,-80.5821 0/0:135:135,0:135:5458:0:0:0,-40.639,-491.029 0/0:61:61,0:61:2453:0:0:0,-18.3628,-220.906 0/0:169:169,0:169:6737:0:0:0,-50.8741,-606.039 0/0:23:23,0:23:892:0:0:0,-6.92369,-80.5775 0/1:155:140,15:140:5609:15:613:-8.84715,0,-457.96 dDocent_Contig_7766 16 . T G 6637.93 . AB=0.603878;ABP=36.8456;AC=6;AF=0.5;AN=12;AO=218;CIGAR=1X;DP=361;DPB=361;DPRA=0;EPP=476.391;EPPR=313.531;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8691;QR=5693;RO=143;RPL=0;RPP=476.391;RPPR=313.531;RPR=218;RUN=1;SAF=218;SAP=476.391;SAR=0;SRF=143;SRP=313.531;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:14:2,12:2:81:12:473:-38.703,0,-3.47131 0/1:107:52,55:52:2073:55:2190:-165.065,0,-154.548 0/1:44:24,20:24:954:20:804:-59.4322,0,-72.9176 0/1:105:32,73:32:1274:73:2942:-233.258,0,-83.3196 0/1:29:9,20:9:359:20:793:-62.9595,0,-23.9424 0/1:62:24,38:24:952:38:1489:-115.595,0,-67.3214 dDocent_Contig_7767 127 . A G 451.632 . AB=0.197279;ABP=120.019;AC=1;AF=0.0833333;AN=12;AO=29;CIGAR=1X;DP=345;DPB=345;DPRA=3.71212;EPP=65.983;EPPR=689.196;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1007;QR=11115;RO=316;RPL=0;RPP=65.983;RPPR=689.196;RPR=29;RUN=1;SAF=0;SAP=65.983;SAR=29;SRF=0;SRP=689.196;SRR=316;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:1:1,0:1:36:0:0:0,-0.30103,-3.59827 0/0:16:16,0:16:560:0:0:0,-4.81648,-50.7282 0/0:30:30,0:30:1077:0:0:0,-9.0309,-97.2431 0/0:48:48,0:48:1709:0:0:0,-14.4494,-154.097 0/1:147:118,29:118:4110:29:1007:-46.6857,0,-325.837 0/0:103:103,0:103:3623:0:0:0,-31.0061,-326.28 dDocent_Contig_7768 97 . T G 1305.69 . AB=0.286385;ABP=87.4327;AC=5;AF=0.416667;AN=12;AO=69;CIGAR=1X;DP=308;DPB=308;DPRA=0;EPP=152.842;EPPR=521.992;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.985507;PAIREDR=0.903766;PAO=0;PQA=0;PQR=0;PRO=0;QA=2549;QR=8985;RO=239;RPL=34;RPP=3.04177;RPPR=5.63606;RPR=35;RUN=1;SAF=34;SAP=3.04177;SAR=35;SRF=111;SRP=5.63606;SRR=128;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:24,14:24:924:14:530:-36.5967,0,-72.0297 0/1:44:34,10:34:1291:10:376:-20.9423,0,-103.227 0/1:31:26,5:26:985:5:182:-7.39964,0,-79.6259 0/1:72:52,20:52:1953:20:706:-42.1701,0,-154.329 0/1:28:16,12:16:611:12:453:-32.6822,0,-46.8945 0/0:95:87,8:87:3221:8:302:0,-1.06467,-262.504 dDocent_Contig_7769 16 . A G 138.637 . AB=0.120968;ABP=157.745;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=615;DPB=615;DPRA=1.26273;EPP=35.5824;EPPR=768.816;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=58.2683;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.808333;PAO=0;PQA=0;PQR=0;PRO=0;QA=582;QR=23498;RO=600;RPL=0;RPP=35.5824;RPPR=1305.89;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=530;SRP=768.816;SRR=70;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:142:142,0:142:5493:0:0:0,-42.7463,-490.928 0/0:184:184,0:184:7315:0:0:0,-55.3895,-657.992 0/1:124:109,15:109:4231:15:582:-15.3865,0,-332.402 0/0:109:109,0:109:4313:0:0:0,-32.8123,-383.036 0/0:25:25,0:25:953:0:0:0,-7.52575,-76.4315 0/0:31:31,0:31:1193:0:0:0,-9.33193,-99.5594 dDocent_Contig_7770 47 . A T 77.0354 . AB=0.119048;ABP=108.895;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=327;DPB=327;DPRA=1.05714;EPP=31.2394;EPPR=684.853;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.615385;PAIREDR=0.576433;PAO=0;PQA=0;PQR=0;PRO=0;QA=507;QR=12429;RO=314;RPL=0;RPP=31.2394;RPPR=684.853;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=314;SRP=684.853;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:33,5:33:1299:5:201:-7.03175,0,-105.737 0/0:80:79,1:79:3154:1:40:0,-20.0867,-279.937 0/1:46:41,5:41:1593:5:193:-3.89271,0,-129.762 0/0:58:56,2:56:2200:2:73:0,-10.5297,-191.244 0/0:44:44,0:44:1754:0:0:0,-13.2453,-158.08 0/0:61:61,0:61:2429:0:0:0,-18.3628,-218.762 dDocent_Contig_7771 107 . N T 116.348 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=26.1667;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=156;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:10:-0.89123,-0.30103,0 1/1:2:0,2:0:0:2:70:-4.48343,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:41:-3.55872,-0.60206,0 1/1:1:0,1:0:0:1:35:-2.08318,-0.30103,0 dDocent_Contig_7772 11 . T G 437.994 . AB=0.0582011;ABP=323.435;AC=0;AF=0;AN=12;AO=11;CIGAR=2M1X10M;DP=522;DPB=522;DPRA=1.22727;EPP=26.8965;EPPR=893.314;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.995122;PAO=0;PQA=0;PQR=0;PRO=0;QA=415;QR=15721;RO=410;RPL=0;RPP=26.8965;RPPR=893.314;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=410;SRP=893.314;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:98:64,7,8,19,0:64:2440:7,8,19,0:276,302,700,0:-37.9698,-36.7694,-234.831,-32.4817,-212.187,-230.246,0,-179.705,-175.421,-194.452,-57.2357,-236.938,-232.654,-200.172,-257.406 0|0:95:80,0,1,8,6:80:3097:0,1,8,6:0,37,312,233:-1.41007,-25.4925,-279.9,-22.4666,-276.873,-276.572,0,-254.409,-251.382,-252,-6.34693,-260.755,-257.729,-235.264,-258.949 0|0:68:59,2,0,7,0:59:2268:2,0,7,0:79,0,268,0:-4.23047,-15.6412,-201.227,-21.9912,-201.829,-208.178,0,-179.835,-186.184,-184.077,-21.9912,-201.829,-208.178,-186.184,-208.178 0|0:94:70,0,8,8,5:70:2702:0,8,8,5:0,309,309,182:-4.31057,-25.3827,-247.291,0,-221.912,-219.504,-0.000130571,-221.912,-196.533,-219.504,-10.5227,-232.428,-207.049,-207.049,-230.923 0|0:77:68,3,0,4,0:68:2587:3,0,4,0:118,0,156,0:0,-18.2843,-229.634,-20.47,-230.537,-232.772,-7.52221,-217.713,-219.947,-218.742,-20.47,-230.537,-232.772,-219.947,-232.772 0|0:90:69,5,8,7,0:69:2627:5,8,7,0:200,307,266,0:-4.42692,-8.79566,-222.757,0,-199.062,-213.054,-3.38701,-202.448,-193.648,-216.74,-25.198,-224.262,-215.462,-218.848,-240.661 dDocent_Contig_7773 7 . T C 2434.56 . AB=0.579618;ABP=11.6547;AC=4;AF=0.333333;AN=12;AO=91;CIGAR=1X2M1X;DP=177;DPB=177;DPRA=3.925;EPP=200.614;EPPR=174.557;GTI=0;LEN=1;MEANALT=1.5;MQM=40;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.860759;PAO=0;PQA=0;PQR=0;PRO=0;QA=3493;QR=3013;RO=79;RPL=0;RPP=200.614;RPPR=174.557;RPR=91;RUN=1;SAF=91;SAP=200.614;SAR=0;SRF=79;SRP=174.557;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:37:11,26,0:11:417:26,0:1000,0:-73.7447,0,-26.7428,-77.056,-34.5696,-111.252 0|1:34:14,16,4:14:535:16,4:611,153:-42.7036,0,-39.0817,-34.3582,-31.3428,-77.063 0|1:30:12,16,2:12:449:16,2:614,77:-43.5076,0,-31.9434,-40.7949,-30.4359,-76.9676 0|1:56:23,33,0:23:885:33,0:1268,0:-90.7223,0,-63.1129,-97.646,-73.0469,-170.318 0|0:9:9,0,0:9:341:0,0:0,0:0,-2.70927,-31.0466,-2.70927,-31.0466,-31.0466 0|0:11:10,0,0:10:386:0,0:0,0:0,-3.0103,-34.9167,-3.0103,-34.9167,-34.9167 dDocent_Contig_7774 41 . A T 1548.89 . AB=0.355422;ABP=33.1493;AC=6;AF=0.5;AN=12;AO=59;CIGAR=1X;DP=166;DPB=166;DPRA=0;EPP=131.127;EPPR=235.358;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.322034;PAIREDR=0.869159;PAO=0;PQA=0;PQR=0;PRO=0;QA=2377;QR=4220;RO=107;RPL=0;RPP=131.127;RPPR=235.358;RPR=59;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=107;SRP=235.358;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:18:7,11:7:286:11:451:-35.5271,0,-20.6963 0/1:35:26,9:26:1026:9:342:-20.5919,0,-82.0948 0/1:20:12,8:12:481:8:326:-23.6891,0,-37.6199 0/1:24:12,12:12:479:12:488:-37.0462,0,-36.2366 0/1:37:24,13:24:935:13:524:-36.3694,0,-73.3066 0/1:32:26,6:26:1013:6:246:-12.8872,0,-81.8205 dDocent_Contig_7775 9 . G A 8072.86 . AB=0.355288;ABP=290.224;AC=6;AF=0.5;AN=12;AO=561;CIGAR=1X;DP=1579;DPB=1579;DPRA=0;EPP=1221.21;EPPR=2146.25;GTI=0;LEN=1;MEANALT=1.83333;MQM=32.5116;MQMR=42.7356;NS=6;NUMALT=1;ODDS=0;PAIRED=0.290553;PAIREDR=0.421479;PAO=0;PQA=0;PQR=0;PRO=0;QA=21207;QR=37338;RO=987;RPL=0;RPP=1221.21;RPPR=2146.25;RPR=561;RUN=1;SAF=561;SAP=1221.21;SAR=0;SRF=987;SRP=2146.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:239:148,85:148:5558:85:3214:-120.991,0,-335.864 0/1:334:231,99:231:8749:99:3752:-134.212,0,-490.161 0/1:211:141,65:141:5318:65:2470:-73.1466,0,-325.016 0/1:279:200,79:200:7616:79:2974:-101.115,0,-495.608 0/1:269:132,127:132:4984:127:4828:-220.913,0,-298.69 0/1:247:135,106:135:5113:106:3969:-168.131,0,-289.085 dDocent_Contig_7776 9 . G A 1773.62 . AB=0.303644;ABP=85.7285;AC=5;AF=0.416667;AN=12;AO=75;CIGAR=1X;DP=263;DPB=263;DPRA=3.0875;EPP=165.871;EPPR=411.247;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2880;QR=7215;RO=188;RPL=0;RPP=165.871;RPPR=411.247;RPR=75;RUN=1;SAF=75;SAP=165.871;SAR=0;SRF=188;SRP=411.247;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:25,3:25:959:3:117:-2.48154,0,-78.1949 0/1:73:63,10:63:2423:10:388:-13.3028,0,-196.301 0/0:16:16,0:16:615:0:0:0,-4.81648,-55.6894 0/1:65:40,25:40:1533:25:961:-67.2368,0,-118.677 0/1:31:18,13:18:691:13:495:-35.5643,0,-53.192 0/1:50:26,24:26:994:24:919:-67.9747,0,-74.7191 dDocent_Contig_7777 8 . C T 3141.21 . AB=0.41115;ABP=22.6897;AC=6;AF=0.5;AN=12;AO=118;CIGAR=1X;DP=287;DPB=287;DPRA=0;EPP=259.244;EPPR=369.989;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.466102;PAIREDR=0.556213;PAO=0;PQA=0;PQR=0;PRO=0;QA=4553;QR=6511;RO=169;RPL=0;RPP=259.244;RPPR=369.989;RPR=118;RUN=1;SAF=118;SAP=259.244;SAR=0;SRF=169;SRP=369.989;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:7,16:7:272:16:616:-48.8562,0,-17.9235 0/1:62:38,24:38:1461:24:931:-65.4427,0,-113.101 0/1:25:10,15:10:381:15:563:-43.48,0,-27.1194 0/1:62:39,23:39:1504:23:893:-62.0254,0,-116.969 0/1:50:33,17:33:1272:17:662:-44.8656,0,-99.7199 0/1:65:42,23:42:1621:23:888:-60.6726,0,-126.588 dDocent_Contig_7778 54 . G A 106.35 . AB=0.138614;ABP=117.582;AC=3;AF=0.25;AN=12;AO=17;CIGAR=1X;DP=234;DPB=234;DPRA=1.06;EPP=39.9253;EPPR=474.22;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.470588;PAIREDR=0.603687;PAO=0;PQA=0;PQR=0;PRO=0;QA=582;QR=7271;RO=217;RPL=17;RPP=39.9253;RPPR=440.117;RPR=0;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=213;SRP=440.117;SRR=4;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:29,3:29:975:3:105:-0.163202,0,-78.4212 0/0:58:55,3:55:1860:3:100:0,-8.12921,-158.349 0/1:24:21,3:21:696:3:105:-2.57144,0,-55.726 0/1:45:37,8:37:1225:8:272:-11.2654,0,-96.996 0/0:27:27,0:27:891:0:0:0,-8.12781,-80.4911 0/0:48:48,0:48:1624:0:0:0,-14.4494,-146.446 dDocent_Contig_7779 1 . N G 77.8076 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_7780 12 . T C 1147.55 . AB=0.333333;ABP=34.8586;AC=1;AF=0.0833333;AN=12;AO=45;CIGAR=2X;DP=419;DPB=419;DPRA=1.72444;EPP=100.727;EPPR=812.97;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.977778;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1772;QR=14901;RO=373;RPL=0;RPP=100.727;RPPR=812.97;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=373;SRP=812.97;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:8:8,0:8:314:0:0:0,-2.40824,-28.6246 0|0:55:55,0:55:2211:0:0:0,-16.5566,-199.162 0|0:62:61,1:61:2443:1:41:0,-14.5693,-215.922 0|0:91:91,0:91:3623:0:0:0,-27.3937,-326.106 0|0:71:70,0:70:2781:0:0:0,-21.0721,-249.996 0|1:132:88,44:88:3529:44:1731:-116.278,0,-277.91 dDocent_Contig_7781 68 . G A 135.158 . AB=0.190476;ABP=37.9607;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=120;DPB=120;DPRA=1.21176;EPP=26.8965;EPPR=239.701;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=432;QR=4111;RO=109;RPL=11;RPP=26.8965;RPPR=239.701;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=109;SRP=239.701;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:18:15,3:15:553:3:117:-5.49184,0,-44.6854 0/0:21:20,1:20:750:1:39:0,-2.42507,-63.9307 0/0:20:19,1:19:733:1:36:0,-2.42232,-62.7028 0/1:24:19,5:19:705:5:201:-11.2458,0,-56.5496 0/0:17:17,0:17:648:0:0:0,-5.11751,-58.6551 0/0:20:19,1:19:722:1:39:0,-2.12404,-61.4122 dDocent_Contig_7782 1 . N A 97.0363 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=104;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:104:-9.70309,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_7784 13 . G T 9034.26 . AB=0.452229;ABP=15.4582;AC=6;AF=0.5;AN=12;AO=284;CIGAR=1M2X2M1X2M1X;DP=628;DPB=628;DPRA=0;EPP=619.708;EPPR=369.989;GTI=0;LEN=1;MEANALT=2.5;MQM=56.1127;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11111;QR=6561;RO=169;RPL=0;RPP=619.708;RPPR=369.989;RPR=284;RUN=1;SAF=284;SAP=619.708;SAR=0;SRF=169;SRP=369.989;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:63:22,24,17:22:861:24,17:947,655:-70.7672,0,-63.5735,-23.612,-17.0202,-89.2889 1|0:94:19,42,32:19:728:42,32:1629,1189:-164.395,-37.5506,-84.6536,-72.8199,0,-122.928 0|1:91:34,32,25:34:1349:32,25:1266,967:-93.1245,0,-101.424,-23.9368,-31.6358,-127.464 0|1:89:32,31,26:32:1250:31,26:1215,1005:-89.11,0,-93.4315,-16.2174,-20.2392,-111.153 1|0:135:32,67,33:32:1215:67,33:2604,1281:-206.615,-2.93438,-82.389,-113.692,0,-203.379 1|0:156:30,88,37:30:1158:88,37:3450,1436:-290.637,-22.8986,-91.5027,-181.676,0,-265.633 dDocent_Contig_7785 25 . A G 152.95 . AB=0.139535;ABP=100.07;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=164;DPB=164;DPRA=2.21569;EPP=33.4109;EPPR=328.731;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.357143;PAIREDR=0.606667;PAO=0;PQA=0;PQR=0;PRO=0;QA=567;QR=5929;RO=150;RPL=0;RPP=33.4109;RPPR=328.731;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=150;SRP=328.731;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:754:0:0:0,-5.71957,-68.1808 0/0:27:25,2:25:994:2:82:0,-0.348132,-81.9819 0/0:6:6,0:6:242:0:0:0,-1.80618,-22.1569 0/0:26:26,0:26:1020:0:0:0,-7.82678,-92.101 0/1:47:40,7:40:1570:7:282:-11.6037,0,-127.394 0/1:39:34,5:34:1349:5:203:-6.91289,0,-109.936 dDocent_Contig_7786 34 . T C 430.731 . AB=0.198276;ABP=94.7363;AC=4;AF=0.333333;AN=12;AO=23;CIGAR=1X;DP=149;DPB=149;DPRA=1.75758;EPP=52.9542;EPPR=259.52;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.97619;PAO=0;PQA=0;PQR=0;PRO=0;QA=930;QR=4932;RO=126;RPL=0;RPP=52.9542;RPPR=276.616;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=124;SRP=259.52;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:10,2:10:371:2:81:-4.07337,0,-30.1194 0/1:41:33,8:33:1293:8:326:-17.3676,0,-104.294 0/1:37:30,7:30:1187:7:279:-14.3414,0,-95.9734 0/1:26:20,6:20:782:6:244:-14.5118,0,-62.8669 0/0:15:15,0:15:584:0:0:0,-4.51545,-52.8953 0/0:18:18,0:18:715:0:0:0,-5.41854,-64.6752 dDocent_Contig_7787 66 . T A 271.881 . AB=0.113208;ABP=71.8828;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1M6D7M1X5M;DP=239;DPB=231.5;DPRA=1.07071;EPP=16.0391;EPPR=443.819;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.666667;PAIREDR=0.512315;PAO=0;PQA=0;PQR=0;PRO=0;QA=220;QR=7997;RO=203;RPL=6;RPP=16.0391;RPPR=443.819;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=203;SRP=443.819;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:26:23,0,3:23:905:0,3:0,117:-3.08343,-10.0071,-84.4575,0,-74.8404,-73.9374 0|0:59:53,0,2:53:2085:0,2:0,81:0,-15.9546,-187.469,-9.26631,-180.789,-180.187 0|0:19:12,0,5:12:474:0,5:0,187:-11.6954,-15.3077,-54.3246,0,-39.0175,-37.5124 0|0:42:33,0,8:33:1282:0,8:0,300:-14.6023,-24.5363,-129.879,0,-105.315,-102.907 0|1:53:43,6,3:43:1709:6,3:220,114:-5.02283,0,-138.909,-8.61628,-131.367,-148.44 0|0:40:39,0,0:39:1542:0,0:0,0:0,-11.7402,-138.636,-11.7402,-138.636,-138.636 dDocent_Contig_7788 11 . C G 253.351 . AB=0.261905;ABP=23.691;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=288;DPB=288;DPRA=1.82258;EPP=42.0968;EPPR=589.308;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996296;PAO=0;PQA=0;PQR=0;PRO=0;QA=714;QR=10784;RO=270;RPL=0;RPP=42.0968;RPPR=589.308;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=270;SRP=589.308;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:52:49,3:49:1974:3:119:0,-4.55855,-166.752 0/0:65:63,2:63:2538:2:79:0,-12.0697,-221.055 0/1:42:31,11:31:1235:11:435:-26.858,0,-98.7795 0/0:67:65,2:65:2586:2:81:0,-12.4833,-225.179 0/0:45:45,0:45:1770:0:0:0,-13.5463,-159.525 0/0:17:17,0:17:681:0:0:0,-5.11751,-61.6195 dDocent_Contig_7790 80 . T C 2348.58 . AB=0.363636;ABP=42.0968;AC=6;AF=0.5;AN=12;AO=88;CIGAR=1X;DP=242;DPB=242;DPRA=0;EPP=194.1;EPPR=337.417;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.477273;PAIREDR=0.577922;PAO=0;PQA=0;PQR=0;PRO=0;QA=3521;QR=6128;RO=154;RPL=88;RPP=194.1;RPPR=337.417;RPR=0;RUN=1;SAF=88;SAP=194.1;SAR=0;SRF=154;SRP=337.417;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:45:25,20:25:994:20:803:-59.0424,0,-76.21 0/1:56:40,16:40:1618:16:639:-40.987,0,-128.989 0/1:39:30,9:30:1181:9:362:-21.2029,0,-94.8156 0/1:53:34,19:34:1356:19:745:-51.415,0,-106.342 0/1:25:11,14:11:447:14:567:-43.8467,0,-33.0598 0/1:24:14,10:14:532:10:405:-29.5859,0,-40.9899 dDocent_Contig_7791 18 . T C 871.398 . AB=0.2;ABP=171.082;AC=3;AF=0.25;AN=12;AO=49;CIGAR=1X;DP=321;DPB=321;DPRA=0;EPP=109.412;EPPR=593.651;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996324;PAO=0;PQA=0;PQR=0;PRO=0;QA=1968;QR=10731;RO=272;RPL=0;RPP=109.412;RPPR=593.651;RPR=49;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=272;SRP=593.651;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:36,2:36:1417:2:81:0,-3.75341,-120.101 0/1:80:72,8:72:2855:8:324:-5.44679,0,-232.965 0/1:70:54,16:54:2145:16:641:-36.9515,0,-172.159 0/0:40:38,2:38:1461:2:71:0,-5.30082,-124.991 0/1:65:46,19:46:1829:19:769:-49.9631,0,-145.257 0/0:28:26,2:26:1024:2:82:0,-0.649162,-84.6755 dDocent_Contig_7792 28 . G A 2512.65 . AB=0.460733;ABP=5.56832;AC=6;AF=0.5;AN=12;AO=88;CIGAR=1X;DP=191;DPB=191;DPRA=0;EPP=194.1;EPPR=226.672;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.715909;PAIREDR=0.776699;PAO=0;PQA=0;PQR=0;PRO=0;QA=3533;QR=4101;RO=103;RPL=0;RPP=194.1;RPPR=226.672;RPR=88;RUN=1;SAF=88;SAP=194.1;SAR=0;SRF=103;SRP=226.672;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:29:22,7:22:850:7:282:-17.0227,0,-68.0653 0/1:41:20,21:20:791:21:851:-64.5567,0,-59.1659 0/1:22:9,13:9:368:13:524:-40.8848,0,-26.8627 0/1:40:24,16:24:971:16:654:-47.1508,0,-75.6457 0/1:36:11,25:11:447:25:997:-79.1901,0,-29.7484 0/1:23:17,6:17:674:6:225:-13.6813,0,-54.0644 dDocent_Contig_7793 16 . A T 33.9218 . AB=0.117647;ABP=46.1843;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=598;DPB=598;DPRA=0.301418;EPP=11.6962;EPPR=1292.86;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=164;QR=23893;RO=594;RPL=0;RPP=11.6962;RPPR=1292.86;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=594;SRP=1292.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:37,0:37:1491:0:0:0,-11.1381,-134.435 0/0:15:15,0:15:611:0:0:0,-4.51545,-55.3264 0/0:18:18,0:18:726:0:0:0,-5.41854,-65.6652 0/1:34:30,4:30:1207:4:164:-4.91488,0,-98.6684 0/0:242:242,0:242:9735:0:0:0,-72.8493,-875.505 0/0:252:252,0:252:10123:0:0:0,-75.8596,-910.391 dDocent_Contig_7795 38 . T A 59.3622 . AB=0.214286;ABP=12.937;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=198;DPB=198;DPRA=0.380435;EPP=9.52472;EPPR=426.447;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=8.67362e-19;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=122;QR=7781;RO=195;RPL=0;RPP=9.52472;RPPR=426.447;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=195;SRP=426.447;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:14:11,3:11:448:3:122:-7.15807,0,-36.4616 0/0:52:52,0:52:2102:0:0:0,-15.6536,-189.357 0/0:34:34,0:34:1336:0:0:0,-10.235,-120.494 0/0:48:48,0:48:1898:0:0:0,-14.4494,-171.023 0/0:22:22,0:22:872:0:0:0,-6.62266,-78.7844 0/0:28:28,0:28:1125:0:0:0,-8.42884,-101.532 dDocent_Contig_7796 8 . C T 1178.43 . AB=0.186813;ABP=313.125;AC=6;AF=0.5;AN=12;AO=68;CIGAR=1X;DP=364;DPB=364;DPRA=0;EPP=150.67;EPPR=645.766;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.955882;PAIREDR=0.996622;PAO=0;PQA=0;PQR=0;PRO=0;QA=2628;QR=11364;RO=296;RPL=0;RPP=150.67;RPPR=645.766;RPR=68;RUN=1;SAF=68;SAP=150.67;SAR=0;SRF=296;SRP=645.766;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:47:37,10:37:1432:10:387:-21.0391,0,-115.01 0/1:77:61,16:61:2348:16:619:-32.8708,0,-188.35 0/1:47:39,8:39:1499:8:312:-14.2965,0,-121.035 0/1:61:47,14:47:1787:14:538:-30.4013,0,-142.717 0/1:69:58,11:58:2212:11:428:-18.1043,0,-178.529 0/1:63:54,9:54:2086:9:344:-12.3528,0,-169.004 dDocent_Contig_7797 8 . C T 10033.2 . AB=0.582492;ABP=38.1194;AC=6;AF=0.5;AN=12;AO=346;CIGAR=1X;DP=594;DPB=594;DPRA=0;EPP=728.508;EPPR=515.793;GTI=0;LEN=1;MEANALT=1;MQM=59.6012;MQMR=43.7339;NS=6;NUMALT=1;ODDS=0;PAIRED=0.968208;PAIREDR=0.423387;PAO=0;PQA=0;PQR=0;PRO=0;QA=13272;QR=9583;RO=248;RPL=0;RPP=754.34;RPPR=541.535;RPR=346;RUN=1;SAF=343;SAP=728.508;SAR=3;SRF=245;SRP=515.793;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:74:39,35:39:1504:35:1353:-99.779,0,-100.734 0/1:87:37,50:37:1429:50:1919:-146.764,0,-84.7507 0/1:76:35,41:35:1350:41:1537:-114.062,0,-84.792 0/1:101:46,55:46:1779:55:2126:-161.162,0,-94.5878 0/1:125:35,90:35:1355:90:3449:-272.117,0,-47.1982 0/1:131:56,75:56:2166:75:2888:-220.656,0,-131.163 dDocent_Contig_7798 185 . C T 74.5365 . AB=0.217391;ABP=18.9659;AC=2;AF=0.166667;AN=12;AO=5;CIGAR=1X;DP=61;DPB=61;DPRA=1.21053;EPP=13.8677;EPPR=122.441;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=186;QR=2090;RO=55;RPL=5;RPP=13.8677;RPPR=122.441;RPR=0;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=122.441;SRR=55;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:4:4,0:4:142:0:0:0,-1.20412,-13.126 0/1:7:5,1:5:188:1:37:-1.50203,0,-15.0719 0/1:16:12,4:12:468:4:149:-8.95407,0,-37.653 0/0:8:8,0:8:275:0:0:0,-2.40824,-25.0714 0/0:12:12,0:12:466:0:0:0,-3.61236,-42.2869 0/0:14:14,0:14:551:0:0:0,-4.21442,-49.9344 dDocent_Contig_7800 44 . G A 2096.07 . AB=0.324111;ABP=70.9954;AC=2;AF=0.166667;AN=12;AO=82;CIGAR=1X;DP=482;DPB=482;DPRA=2.20961;EPP=181.071;EPPR=865.085;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.549118;PAO=0;PQA=0;PQR=0;PRO=0;QA=3200;QR=15759;RO=397;RPL=0;RPP=181.071;RPPR=865.085;RPR=82;RUN=1;SAF=82;SAP=181.071;SAR=0;SRF=397;SRP=865.085;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:52:52,0:52:2061:0:0:0,-15.6536,-185.681 0/0:56:56,0:56:2235:0:0:0,-16.8577,-201.322 0/0:56:56,0:56:2201:0:0:0,-16.8577,-198.259 0/0:65:65,0:65:2592:0:0:0,-19.5669,-233.416 0/1:116:76,40:76:3026:40:1551:-104.914,0,-237.508 0/1:137:92,42:92:3644:42:1649:-107.915,0,-287.265 dDocent_Contig_7801 48 . T C 1068.23 . AB=0.255556;ABP=96.4319;AC=3;AF=0.25;AN=12;AO=52;CIGAR=1X;DP=336;DPB=336;DPRA=0.866667;EPP=107.408;EPPR=619.708;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.884615;PAIREDR=0.880282;PAO=0;PQA=0;PQR=0;PRO=0;QA=2082;QR=11210;RO=284;RPL=1;RPP=107.408;RPPR=619.708;RPR=51;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=284;SRP=619.708;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:47:44,3:44:1723:3:123:0,-2.68362,-143.831 0/1:65:43,22:43:1704:22:886:-60.48,0,-134.02 0/1:58:41,17:41:1591:17:682:-44.2488,0,-125.961 0/0:46:43,3:43:1711:3:123:0,-2.38259,-142.75 0/1:57:50,7:50:1982:7:268:-7.31628,0,-161.421 0/0:63:63,0:63:2499:0:0:0,-18.9649,-225.057 dDocent_Contig_7802 24 . G T 204.448 . AB=0.0885417;ABP=1132.36;AC=2;AF=0.166667;AN=12;AO=189;CIGAR=1M1X1M;DP=3110;DPB=3068.67;DPRA=0;EPP=413.419;EPPR=5849;GTI=0;LEN=1;MEANALT=3.33333;MQM=60;MQMR=59.9978;NS=6;NUMALT=3;ODDS=0;PAIRED=0.867725;PAIREDR=0.951389;PAO=0;PQA=0;PQR=0;PRO=0;QA=7575;QR=107731;RO=2736;RPL=0;RPP=413.419;RPPR=5944.16;RPR=189;RUN=1;SAF=189;SAP=413.419;SAR=0;SRF=2725;SRP=5849;SRR=11;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:319:280,9,30,0:280:11051:9,30,0:352,1189,0:-13.5788,-68.9287,-975.474,0,-880.32,-900.229,-97.8672,-978.183,-909.259,-1007.12 0|0:859:775,36,45,0:775:30490:36,45,0:1442,1804,0:0,-114.498,-2611.59,-84.6698,-2473.81,-2579.06,-233.298,-2622.43,-2592.61,-2741.23 0|1:449:383,28,38,0:383:15133:28,38,0:1105,1522,0:-10.0878,-34.4734,-1271.27,0,-1154.32,-1233.79,-125.382,-1279.7,-1245.23,-1370.61 0|0:434:405,13,15,0:405:15858:13,15,0:514,608,0:0,-79.6165,-1379.54,-71.7631,-1333.31,-1371.09,-121.917,-1383.45,-1375.61,-1425.75 0|0:606:519,16,39,28:519:20445:16,39,28:630,1567,1118:0,-104.409,-1781.46,-27.1088,-1657.15,-1697.24,-64.1565,-1694.2,-1616.9,-1737.6 0|0:443:374,22,22,24:374:14754:22,22,24:828,885,912:0,-44.767,-1252,-39.6456,-1185.69,-1246.89,-37.8221,-1183.86,-1178.75,-1244.45 dDocent_Contig_7803 124 . A G 197.229 . AB=0.2;ABP=57.7314;AC=2;AF=0.166667;AN=12;AO=24;CIGAR=1X;DP=230;DPB=230;DPRA=0;EPP=55.1256;EPPR=448.162;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.4167;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.375;PAIREDR=0.892683;PAO=0;PQA=0;PQR=0;PRO=0;QA=811;QR=7199;RO=205;RPL=0;RPP=55.1256;RPPR=448.162;RPR=24;RUN=1;SAF=0;SAP=55.1256;SAR=24;SRF=0;SRP=448.162;SRR=205;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:20,6:20:690:6:209:-11.3218,0,-54.5914 0/1:44:35,8:35:1242:8:271:-11.623,0,-99.0043 0/0:27:25,2:25:881:2:55:0,-2.90415,-74.3838 0/0:49:46,3:46:1609:3:102:0,-5.23367,-135.579 0/0:36:34,2:34:1179:2:69:0,-4.28987,-99.8646 0/0:48:45,3:45:1598:3:105:0,-4.65328,-134.315 dDocent_Contig_7804 11 . C T 320.208 . AB=0.14;ABP=228.149;AC=2;AF=0.166667;AN=12;AO=39;CIGAR=1X;DP=567;DPB=567;DPRA=1.23544;EPP=87.6977;EPPR=1149.55;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1450;QR=21131;RO=528;RPL=0;RPP=87.6977;RPPR=1149.55;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=528;SRP=1149.55;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:70:69,1:69:2726:1:10:0,-20.0721,-244.462 0/0:79:79,0:79:3168:0:0:0,-23.7814,-285.178 0/0:131:122,9:122:4864:9:351:0,-7.4841,-405.681 0/0:87:86,1:86:3472:1:36:0,-22.5913,-308.903 0/1:100:89,11:89:3581:11:429:-8.86232,0,-292.207 0/1:100:83,17:83:3320:17:624:-26.3803,0,-268.743 dDocent_Contig_7805 98 . N T 53.2044 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=56;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:56:-5.31935,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_7806 42 . C T 281.699 . AB=0.692308;ABP=7.18621;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=138;DPB=138;DPRA=0.52;EPP=22.5536;EPPR=283.13;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=366;QR=5071;RO=129;RPL=0;RPP=22.5536;RPPR=283.13;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=129;SRP=283.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:13:4,9:4:163:9:366:-29.3918,0,-11.145 0/0:46:46,0:46:1816:0:0:0,-13.8474,-163.661 0/0:15:15,0:15:578:0:0:0,-4.51545,-52.3552 0/0:32:32,0:32:1259:0:0:0,-9.63296,-113.583 0/0:23:23,0:23:910:0:0:0,-6.92369,-82.2059 0/0:9:9,0:9:345:0:0:0,-2.70927,-31.4025 dDocent_Contig_7807 56 . C T 47.2388 . AB=0.157895;ABP=41.6397;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=133;DPB=133;DPRA=1.97015;EPP=18.2106;EPPR=274.444;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=229;QR=4423;RO=125;RPL=7;RPP=18.2106;RPPR=274.444;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=125;SRP=274.444;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:806:0:0:0,-6.92369,-72.8571 0/0:29:29,0:29:974:0:0:0,-8.72987,-87.9586 0/0:4:4,0:4:152:0:0:0,-1.20412,-14.0495 0/0:11:11,0:11:413:0:0:0,-3.31133,-37.5185 0/1:38:32,6:32:1129:6:193:-6.2467,0,-90.4572 0/0:28:26,1:26:949:1:36:0,-4.78945,-82.2135 dDocent_Contig_7808 54 . A G 3708.79 . AB=0.396947;ABP=39.2623;AC=5;AF=0.416667;AN=12;AO=158;CIGAR=1X;DP=452;DPB=452;DPRA=0;EPP=346.103;EPPR=641.423;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.936709;PAIREDR=0.894558;PAO=0;PQA=0;PQR=0;PRO=0;QA=5595;QR=10544;RO=294;RPL=158;RPP=346.103;RPPR=641.423;RPR=0;RUN=1;SAF=158;SAP=346.103;SAR=0;SRF=294;SRP=641.423;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:57,2:57:2067:2:74:0,-10.7349,-179.267 0/1:77:51,26:51:1818:26:942:-61.9179,0,-140.715 0/1:71:46,25:46:1649:25:862:-56.5126,0,-127.315 0/1:83:73,10:73:2591:10:359:-7.66629,0,-208.43 0/1:69:28,41:28:1006:41:1456:-110.557,0,-70.0808 0/1:93:39,54:39:1413:54:1902:-143.448,0,-99.4696 dDocent_Contig_7810 14 . T A 3316.66 . AB=0.393548;ABP=33.523;AC=6;AF=0.5;AN=12;AO=122;CIGAR=1X2M1X3M1X;DP=310;DPB=309.75;DPRA=0;EPP=267.93;EPPR=391.704;GTI=0;LEN=1;MEANALT=2;MQM=58.2787;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.713115;PAIREDR=0.955307;PAO=0;PQA=0;PQR=0;PRO=0;QA=4817;QR=7083;RO=179;RPL=0;RPP=267.93;RPPR=391.704;RPR=122;RUN=1;SAF=122;SAP=267.93;SAR=0;SRF=179;SRP=391.704;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:45:31,0,14:31:1217:0,14:0,561:-37.2298,-46.5618,-146.647,0,-100.483,-96.2682 0|1:63:39,0,24:39:1532:0,24:0,952:-66.8914,-78.6316,-204.632,0,-126.395,-119.17 0|1:59:22,1,36:22:869:1,36:40,1406:-108.869,-112.197,-183.403,0,-68.2058,-60.664 0|1:66:37,0,26:37:1473:0,26:0,1034:-73.9724,-85.1105,-206.402,0,-121.31,-113.483 0|1:33:24,2,7:24:950:2,7:80,279:-15.7555,-16.506,-94.0894,0,-71.7145,-76.0824 0|1:44:26,0,15:26:1042:0,15:0,585:-40.1688,-47.9956,-133.849,0,-85.846,-81.3305 dDocent_Contig_7811 12 . A G 1562.08 . AB=0.252;ABP=136.565;AC=3;AF=0.25;AN=12;AO=70;CIGAR=1M1X1M;DP=470;DPB=553.667;DPRA=0.759184;EPP=155.013;EPPR=789.083;GTI=0;LEN=1;MEANALT=1.8;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2783;QR=14361;RO=362;RPL=0;RPP=155.013;RPPR=789.083;RPR=70;RUN=1;SAF=70;SAP=155.013;SAR=0;SRF=362;SRP=789.083;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:51:47,0,4:47:1879:0,4:0,164:0,-14.1484,-168.911,-0.202631,-155.374,-154.17 0|0:98:97,0,0:97:3850:0,0:0,0:0,-29.1999,-346.098,-29.1999,-346.098,-346.098 0|0:71:68,0,3:68:2680:0,3:0,115:0,-20.47,-240.937,-10.6499,-231.501,-230.597 0|1:69:58,0,11:58:2291:0,11:0,445:-19.635,-37.0947,-225.595,0,-188.903,-185.592 0|1:76:24,17,35:24:939:17,35:612,1400:-108.116,-65.4311,-137.505,0,-27.3034,-66.6769 0|1:105:68,18,17:68:2722:18,17:634,659:-33.6783,-2.56287,-221.389,0,-172.676,-219.152 dDocent_Contig_7812 107 . N A 66.4848 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=70;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_7813 17 . C T 116.411 . AB=0.173913;ABP=45.4956;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=167;DPB=167;DPRA=1.01205;EPP=22.5536;EPPR=346.103;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.555556;PAIREDR=0.639241;PAO=0;PQA=0;PQR=0;PRO=0;QA=347;QR=6072;RO=158;RPL=0;RPP=22.5536;RPPR=346.103;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=158;SRP=346.103;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:22,6:22:842:6:232:-12.8199,0,-67.6686 0/0:38:37,1:37:1420:1:39:0,-7.54258,-124.181 0/0:30:30,0:30:1156:0:0:0,-9.0309,-104.336 0/0:25:25,0:25:966:0:0:0,-7.52575,-87.2486 0/1:18:16,2:16:608:2:76:-1.79613,0,-49.6305 0/0:28:28,0:28:1080:0:0:0,-8.42884,-97.4953 dDocent_Contig_7814 36 . C T 2264.57 . AB=0.05;ABP=143.722;AC=0;AF=0;AN=12;AO=4;CIGAR=4M1I7M1X;DP=221;DPB=227.667;DPRA=0;EPP=11.6962;EPPR=265.758;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.75;PAIREDR=0.371901;PAO=0;PQA=0;PQR=0;PRO=0;QA=160;QR=4773;RO=121;RPL=0;RPP=11.6962;RPPR=265.758;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=121;SRP=265.758;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:32:24,0,0,8:24:950:0,0,8:0,0,299:-17.6283,-24.853,-103.058,-24.853,-103.058,-103.058,0,-78.5839,-78.5839,-76.1757 0|0:51:28,3,0,18:28:1108:3,0,18:119,0,706:-49.7027,-48.3321,-138.636,-58.1316,-139.539,-149.335,0,-81.4773,-91.2746,-85.8561 0|0:27:21,0,0,6:21:821:0,0,6:0,0,230:-12.936,-19.2577,-86.7606,-19.2577,-86.7606,-86.7606,0,-67.8876,-67.8876,-66.0815 0|0:29:18,1,0,10:18:705:1,0,10:41,0,363:-24.1734,-26.2036,-83.8888,-29.5919,-84.1899,-87.5749,0,-54.5657,-57.9507,-54.9404 0|0:35:16,0,1,17:16:638:0,1,17:0,39,645:-48.0485,-52.865,-105.416,-49.6586,-102.21,-101.909,0,-52.546,-49.3406,-47.4285 0|0:47:14,0,3,28:14:551:0,3,28:0,111,1088:-85.1895,-89.4039,-134.733,-80.3254,-125.654,-124.751,0,-45.3389,-36.2623,-36.9101 dDocent_Contig_7815 8 . C A 770.641 . AB=0.302752;ABP=39.8456;AC=4;AF=0.4;AN=10;AO=33;CIGAR=1X;DP=123;DPB=123;DPRA=1.94643;EPP=74.6689;EPPR=198.443;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.969697;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1279;QR=3434;RO=90;RPL=0;RPP=74.6689;RPPR=198.443;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=90;SRP=198.443;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:525:0:0:0,-4.21442,-47.5904 0/1:35:23,12:23:868:12:460:-31.2143,0,-67.8972 0/1:19:17,2:17:661:2:78:-1.6839,0,-54.1076 0/1:48:30,18:30:1152:18:702:-49.0646,0,-89.5296 ./.:.:.:.:.:.:.:. 0/1:7:6,1:6:228:1:39:-1.78935,0,-18.7763 dDocent_Contig_7816 16 . G C 15362.5 . AB=0.106768;ABP=1411.93;AC=1;AF=0.0833333;AN=12;AO=112;CIGAR=1X1M1X2M3X3M1X2M1X2M1X;DP=1049;DPB=1048.94;DPRA=0;EPP=246.215;EPPR=841.199;GTI=0;LEN=1;MEANALT=5.5;MQM=43.3214;MQMR=60;NS=6;NUMALT=4;ODDS=1.11022e-16;PAIRED=0.803571;PAIREDR=0.997409;PAO=0;PQA=0;PQR=0;PRO=0;QA=4346;QR=14992;RO=386;RPL=0;RPP=246.215;RPPR=841.199;RPR=112;RUN=1;SAF=112;SAP=246.215;SAR=0;SRF=386;SRP=841.199;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:226:129,21,0,3,71:129:4966:21,0,3,71:824,0,120,2753:-187.31,-158.374,-559.757,-226.143,-566.079,-633.847,-218.919,-558.854,-626.621,-625.718,0,-339.94,-407.708,-400.483,-386.335 0|0:212:95,0,0,16,95:95:3684:0,0,16,95:0,0,615,3710:-276.376,-304.974,-607.637,-304.974,-607.637,-607.637,-259.079,-561.739,-561.739,-556.923,0,-302.692,-302.692,-256.796,-274.094 0|0:112:59,0,0,7,45:59:2320:0,0,7,45:0,0,272,1770:-127.823,-145.584,-336.42,-145.584,-336.42,-336.42,-123.436,-314.272,-314.272,-312.164,0,-190.84,-190.84,-168.692,-177.294 0|0:167:84,0,0,9,72:84:3281:0,0,9,72:0,0,339,2840:-208.418,-233.705,-503.433,-233.705,-503.433,-503.433,-211.153,-480.877,-480.877,-478.168,0,-269.782,-269.782,-247.229,-248.108 1|0:169:13,0,20,49,83:13:507:0,20,49,83:0,779,1911,3209:-361.423,-365.336,-407.011,-301.314,-342.99,-336.969,-221.853,-263.528,-199.507,-248.778,-101.797,-143.474,-79.4488,0,-118.489 0|0:163:6,0,28,28,98:6:234:0,28,28,98:0,1095,1089,3855:-386.119,-387.925,-407.161,-297.897,-317.132,-308.703,-323.734,-342.969,-252.944,-334.54,-70.8231,-90.0625,0,-25.8932,-60.5616 dDocent_Contig_7817 32 . T C 2020.29 . AB=0.496454;ABP=3.0257;AC=4;AF=0.333333;AN=12;AO=74;CIGAR=1X;DP=220;DPB=220;DPRA=0;EPP=163.699;EPPR=320.045;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2925;QR=5856;RO=146;RPL=0;RPP=163.699;RPPR=320.045;RPR=74;RUN=1;SAF=74;SAP=163.699;SAR=0;SRF=146;SRP=320.045;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:14,11:14:565:11:447:-33.0603,0,-43.6668 0/1:74:39,35:39:1579:35:1374:-101.643,0,-120.063 0/1:13:4,9:4:164:9:359:-28.7594,0,-11.2365 0/1:29:14,15:14:543:15:602:-45.7877,0,-40.47 0/0:40:37,3:37:1505:3:103:0,-2.43559,-126.081 0/0:39:38,1:38:1500:1:40:0,-7.74449,-131.241 dDocent_Contig_7818 10 . A G 653.427 . AB=0.223684;ABP=103.812;AC=6;AF=0.5;AN=12;AO=34;CIGAR=1X;DP=152;DPB=152;DPRA=0;EPP=76.8404;EPPR=259.244;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1334;QR=4730;RO=118;RPL=0;RPP=76.8404;RPPR=259.244;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=118;SRP=259.244;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:4:3,1:3:122:1:41:-2.89045,0,-10.1684 0/1:17:12,5:12:476:5:200:-13.2615,0,-38.0712 0/1:19:15,4:15:607:4:162:-9.24739,0,-49.2487 0/1:12:8,4:8:323:4:162:-11.3544,0,-25.8266 0/1:58:47,11:47:1892:11:412:-19.9556,0,-153.02 0/1:42:33,9:33:1310:9:357:-19.846,0,-105.52 dDocent_Contig_7819 202 . G A 215.004 . AB=0.289474;ABP=17.6392;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=140;DPB=140;DPRA=0.745098;EPP=26.8965;EPPR=283.13;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.454545;PAIREDR=0.852713;PAO=0;PQA=0;PQR=0;PRO=0;QA=394;QR=4766;RO=129;RPL=11;RPP=26.8965;RPPR=283.13;RPR=0;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=283.13;SRR=129;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:17,3:17:640:3:109:-4.1474,0,-51.9134 0/0:20:20,0:20:716:0:0:0,-6.0206,-64.7657 0/0:21:21,0:21:807:0:0:0,-6.32163,-72.9504 0/1:18:10,8:10:389:8:285:-20.5743,0,-29.9469 0/0:38:38,0:38:1380:0:0:0,-11.4391,-124.488 0/0:23:23,0:23:834:0:0:0,-6.92369,-75.3831 dDocent_Contig_7820 37 . G A 1721.39 . AB=0.279528;ABP=110.25;AC=4;AF=0.333333;AN=12;AO=76;CIGAR=1X;DP=367;DPB=367;DPRA=0;EPP=168.042;EPPR=634.909;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.710526;PAIREDR=0.683849;PAO=0;PQA=0;PQR=0;PRO=0;QA=3029;QR=11502;RO=291;RPL=0;RPP=168.042;RPPR=634.909;RPR=76;RUN=1;SAF=76;SAP=168.042;SAR=0;SRF=291;SRP=634.909;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:63:59,4:59:2332:4:163:0,-3.90646,-194.984 0/1:73:66,7:66:2589:7:281:-3.68678,0,-211.167 0/0:50:49,1:49:1938:1:38:0,-11.2542,-170.819 0/1:70:53,17:53:2111:17:666:-39.1936,0,-169.102 0/1:43:24,19:24:955:19:755:-55.3265,0,-73.3044 0/1:68:40,28:40:1577:28:1126:-81.1521,0,-121.692 dDocent_Contig_7821 97 . G A 782.755 . AB=0.310606;ABP=44.1367;AC=4;AF=0.333333;AN=12;AO=43;CIGAR=1X;DP=180;DPB=180;DPRA=1.91765;EPP=96.3836;EPPR=300.502;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.635036;PAO=0;PQA=0;PQR=0;PRO=0;QA=1444;QR=4365;RO=137;RPL=43;RPP=96.3836;RPPR=300.502;RPR=0;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=137;SRP=300.502;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:7,12:7:226:12:394:-30.0565,0,-14.9373 0/1:46:34,12:34:1080:12:409:-23.2907,0,-83.6422 0/1:37:26,11:26:827:11:369:-22.3957,0,-63.5868 0/1:30:24,6:24:735:6:205:-9.75432,0,-57.4078 0/0:17:17,0:17:553:0:0:0,-5.11751,-50.0798 0/0:31:29,2:29:944:2:67:0,-2.96888,-78.8956 dDocent_Contig_7822 9 . C T 35.6665 . AB=0.25;ABP=7.35324;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X1M1X;DP=98;DPB=98;DPRA=1.16129;EPP=11.6962;EPPR=181.903;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.882979;PAO=0;PQA=0;PQR=0;PRO=0;QA=152;QR=3680;RO=94;RPL=0;RPP=11.6962;RPPR=207.129;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=91;SRP=181.903;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:16:16,0:16:625:0:0:0,-4.81648,-56.5881 0|1:8:6,2:6:230:2:79:-5.08939,0,-18.6567 0|0:11:11,0:11:433:0:0:0,-3.31133,-39.3252 0|0:10:10,0:10:393:0:0:0,-3.0103,-35.7287 0|0:28:26,2:26:1026:2:73:0,-1.49814,-85.7124 0|0:25:25,0:25:973:0:0:0,-7.52575,-87.8779 dDocent_Contig_7823 21 . C T 301.579 . AB=0.151515;ABP=107.438;AC=5;AF=0.416667;AN=12;AO=15;CIGAR=2X2M;DP=173;DPB=173;DPRA=1.5;EPP=35.5824;EPPR=315.702;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.951389;PAO=0;PQA=0;PQR=0;PRO=0;QA=596;QR=5767;RO=144;RPL=0;RPP=35.5824;RPPR=315.702;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=144;SRP=315.702;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:29:23,0,1,5:23:922:0,1,5:0,36,200:-9.58375,-16.5074,-92.477,-13.5766,-89.541,-89.24,0,-76.0025,-73.0668,-74.4974 0|1:29:24,0,1,4:24:963:0,1,4:0,40,156:-5.59053,-12.8152,-92.1698,-9.51818,-88.8747,-88.5737,0,-79.3482,-76.0531,-78.144 0|0:22:20,0,1,0:20:804:0,1,0:0,41,0:0,-6.0206,-72.2704,-2.63652,-68.886,-68.585,-6.0206,-72.2704,-68.886,-72.2704 0|1:26:20,2,4,0:20:810:2,4,0:80,163,0:-7.43167,-6.86479,-73.0517,0,-60.206,-65.5914,-13.4523,-73.6538,-66.7955,-80.2433 0|1:26:22,0,4,0:22:878:0,4,0:0,162,0:-7.14018,-13.7628,-86.067,0,-72.7078,-71.5037,-13.7628,-86.067,-72.7078,-86.067 0|1:41:35,0,0,6:35:1390:0,0,6:0,0,240:-9.63359,-20.1696,-134.596,-20.1696,-134.596,-134.596,0,-114.825,-114.825,-113.019 dDocent_Contig_7824 7 . T A 52010.3 . AB=0.0949338;ABP=3125.55;AC=4;AF=0.333333;AN=12;AO=208;CIGAR=1X2M1I1M1X;DP=2191;DPB=2592.2;DPRA=0;EPP=454.677;EPPR=313.531;GTI=0;LEN=1;MEANALT=9.33333;MQM=59.8894;MQMR=59.1608;NS=6;NUMALT=4;ODDS=0;PAIRED=0.519231;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=8033;QR=5492;RO=143;RPL=0;RPP=454.677;RPPR=313.531;RPR=208;RUN=1;SAF=208;SAP=454.677;SAR=0;SRF=143;SRP=313.531;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:323:17,28,23,237,12:17:653:28,23,237,12:1092,905,9348,472:-798.361,-713.716,-758.885,-729.424,-693.259,-776.098,-36.1717,0,-15.7104,-18.4296,-779.985,-743.82,-759.528,-66.293,-829.97 0|0:484:67,27,35,330,6:67:2583:27,35,330,6:1037,1384,13030,234:-1045.44,-980.489,-1184.08,-952.458,-1079.05,-1153.64,0,-126.601,-98.5671,-112.388,-1057.09,-1183.68,-1155.65,-203.207,-1267 0|0:266:10,16,23,200,10:10:381:16,23,200,10:627,897,7918,399:-686.128,-637.576,-664.013,-615.497,-595.188,-639.827,-42.3992,-22.0843,0,-13.4501,-672.727,-652.418,-630.339,-57.2634,-700.969 1|0:412:22,37,35,285,14:22:848:37,35,285,14:1422,1382,11284,561:-963.25,-853.265,-911.633,-858.69,-811.588,-917.66,-47.1048,0,-5.42463,-30.8209,-939.573,-892.472,-897.897,-86.322,-1004.86 1|0:308:2,48,26,210,14:2:78:48,26,210,14:1843,1020,8287,546:-823.234,-672.557,-664.52,-740.064,-595.197,-738.649,-144.889,0,-67.5188,-88.0849,-797.856,-652.989,-720.496,-125.334,-800.053 1|0:398:25,52,33,252,21:25:949:52,33,252,21:2012,1308,10009,843:-895.83,-738.096,-800.261,-796.124,-708.683,-864.009,-87.4527,0,-58.0348,-89.4175,-874.762,-787.323,-845.35,-136.7,-946.259 dDocent_Contig_7825 56 . G A 65.986 . AB=0.16129;ABP=33.9012;AC=2;AF=0.166667;AN=12;AO=5;CIGAR=1X;DP=70;DPB=70;DPRA=1.58974;EPP=13.8677;EPPR=144.156;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=204;QR=2562;RO=65;RPL=5;RPP=13.8677;RPPR=144.156;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=65;SRP=144.156;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:10:8,2:8:302:2:82:-4.76938,0,-24.5217 0/0:13:13,0:13:506:0:0:0,-3.91339,-45.8864 0/1:21:18,3:18:722:3:122:-5.05086,0,-58.9855 0/0:8:8,0:8:312:0:0:0,-2.40824,-28.4414 0/0:5:5,0:5:204:0:0:0,-1.50515,-18.744 0/0:13:13,0:13:516:0:0:0,-3.91339,-46.7871 dDocent_Contig_7826 135 . T C 116.794 . AB=0.1;ABP=30.8051;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=2M1X5M;DP=130;DPB=133.625;DPRA=2.26667;EPP=9.52472;EPPR=263.587;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.333333;PAIREDR=0.858333;PAO=0;PQA=0;PQR=0;PRO=0;QA=122;QR=4761;RO=120;RPL=3;RPP=9.52472;RPPR=263.587;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=263.587;SRR=120;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:12:12,0,0:12:467:0,0:0,0:0,-3.61236,-42.3802,-3.61236,-42.3802,-42.3802 0|1:20:17,0,2:17:673:0,2:0,82:-1.65065,-6.76816,-62.1474,0,-55.3779,-54.7759 0|0:48:47,0,1:47:1871:0,1:0,40:0,-14.1484,-168.209,-10.4538,-164.913,-164.612 0|0:6:6,0,0:6:238:0,0:0,0:0,-1.80618,-21.7944,-1.80618,-21.7944,-21.7944 0|0:17:12,5,0:12:475:5,0:199,0:-13.1711,0,-37.9842,-16.7834,-39.4893,-55.8758 0|0:27:26,0,0:26:1037:0,0:0,0:0,-7.82678,-93.3125,-7.82678,-93.3125,-93.3125 dDocent_Contig_7827 73 . T C 8686.33 . AB=0.662188;ABP=122.05;AC=7;AF=0.583333;AN=12;AO=356;CIGAR=1X;DP=532;DPB=532;DPRA=0;EPP=776.054;EPPR=385.189;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.991573;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11478;QR=5706;RO=176;RPL=356;RPP=776.054;RPPR=385.189;RPR=0;RUN=1;SAF=356;SAP=776.054;SAR=0;SRF=176;SRP=385.189;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:118:50,68:50:1602:68:2159:-159.06,0,-108.944 0/1:133:16,117:16:492:117:3716:-294.637,0,-4.53927 1/1:11:0,11:0:0:11:362:-32.8997,-3.31133,0 0/1:110:63,47:63:2054:47:1499:-102.08,0,-152.019 0/1:69:14,55:14:460:55:1803:-141.779,0,-20.9466 0/1:91:33,58:33:1098:58:1939:-147.399,0,-71.7292 dDocent_Contig_7828 13 . A T 285.704 . AB=0.135294;ABP=199.414;AC=2;AF=0.166667;AN=12;AO=27;CIGAR=1X;DP=651;DPB=651;DPRA=0.817814;EPP=61.6401;EPPR=1358.01;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.962963;PAIREDR=0.958333;PAO=0;PQA=0;PQR=0;PRO=0;QA=1074;QR=23891;RO=624;RPL=0;RPP=61.6401;RPPR=1358.01;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=624;SRP=1358.01;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:130:129,1:129:4924:1:41:0,-35.0393,-439.072 0/0:140:140,0:140:5351:0:0:0,-42.1442,-481.559 0/1:47:37,10:37:1424:10:400:-22.2115,0,-114.281 0/0:104:101,3:101:3895:3:119:0,-20.2121,-339.532 0/0:107:107,0:107:4097:0:0:0,-32.2102,-368.801 0/1:123:110,13:110:4200:13:514:-9.58073,0,-341.033 dDocent_Contig_7829 40 . T C 1562.15 . AB=0.246429;ABP=159.387;AC=3;AF=0.3;AN=10;AO=72;CIGAR=1X1M1X;DP=383;DPB=383;DPRA=13.4286;EPP=159.356;EPPR=671.824;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2829;QR=11723;RO=308;RPL=0;RPP=159.356;RPPR=671.824;RPR=72;RUN=1;SAF=72;SAP=159.356;SAR=0;SRF=308;SRP=671.824;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:80:65,15:65:2452:15:590:-29.3562,0,-196.793 0|1:50:34,16:34:1271:16:636:-42.5245,0,-99.6231 0|1:150:110,38:110:4245:38:1492:-89.6353,0,-337.203 0|0:96:92,3:92:3506:3:111:0,-18.5406,-305.326 .:.:.:.:.:.:.:. 0|0:7:7,0:7:249:0:0:0,-2.10721,-22.7486 dDocent_Contig_7830 8 . C A 420.925 . AB=0.372549;ABP=10.206;AC=2;AF=0.166667;AN=12;AO=26;CIGAR=1X;DP=170;DPB=170;DPRA=0;EPP=51.1168;EPPR=315.702;GTI=0;LEN=1;MEANALT=1;MQM=37.7692;MQMR=59.8472;NS=6;NUMALT=1;ODDS=0;PAIRED=0.230769;PAIREDR=0.798611;PAO=0;PQA=0;PQR=0;PRO=0;QA=1004;QR=5521;RO=144;RPL=0;RPP=59.4686;RPPR=315.702;RPR=26;RUN=1;SAF=25;SAP=51.1168;SAR=1;SRF=144;SRP=315.702;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:12,13:12:447:13:505:-32.2346,0,-33.043 0/0:16:14,2:14:542:2:72:0,-3.39244,-47.3834 0/1:26:20,6:20:768:6:233:-13.0798,0,-61.6204 0/0:29:28,1:28:1087:1:39:0,-4.94919,-94.3537 0/0:47:45,2:45:1728:2:77:0,-9.2234,-150.851 0/0:27:25,2:25:949:2:78:0,-2.97626,-80.573 dDocent_Contig_7831 13 . T A 35.578 . AB=0.0955414;ABP=226.091;AC=1;AF=0.0833333;AN=12;AO=51;CIGAR=1X3M1X;DP=1849;DPB=1849;DPRA=0;EPP=113.755;EPPR=3829.14;GTI=0;LEN=1;MEANALT=3.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.960784;PAIREDR=0.99546;PAO=0;PQA=0;PQR=0;PRO=0;QA=1915;QR=69643;RO=1762;RPL=0;RPP=113.755;RPPR=3829.14;RPR=51;RUN=1;SAF=51;SAP=113.755;SAR=0;SRF=1762;SRP=3829.14;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:316:301,12:301:11900:12:450:0,-53.7766,-1029.41 0|0:289:275,10:275:10846:10:378:0,-51.795,-941.153 0|1:157:137,15:137:5412:15:565:-5.08056,0,-440.859 0|0:306:296,8:296:11715:8:299:0,-64.6257,-1026.37 0|0:403:391,2:391:15490:2:73:0,-111.737,-1386.08 0|0:378:362,4:362:14280:4:150:0,-96.6787,-1270.41 dDocent_Contig_7832 42 . G T 26670.3 . AB=0.602496;ABP=105.391;AC=7;AF=0.583333;AN=12;AO=891;CIGAR=1X;DP=1358;DPB=1358;DPRA=0;EPP=1937.79;EPPR=1012.74;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=34263;QR=18393;RO=465;RPL=0;RPP=1937.79;RPPR=1012.74;RPR=891;RUN=1;SAF=891;SAP=1937.79;SAR=0;SRF=465;SRP=1012.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:179:99,80:99:3897:80:3071:-222.63,0,-296.844 0/1:167:69,98:69:2778:98:3724:-284.962,0,-199.852 0/1:298:143,155:143:5688:155:6053:-454.919,0,-422.03 0/1:202:94,107:94:3712:107:4119:-310.137,0,-273.503 1/1:236:20,215:20:766:215:8247:-672.68,-1.59982,0 0/1:276:40,236:40:1552:236:9049:-730.92,0,-56.8349 dDocent_Contig_7833 68 . T C 277.968 . AB=0.173077;ABP=99.5573;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1X;DP=990;DPB=990;DPRA=1.44348;EPP=44.2683;EPPR=2105;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995868;PAO=0;PQA=0;PQR=0;PRO=0;QA=678;QR=34541;RO=968;RPL=19;RPP=44.2683;RPPR=2105;RPR=0;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=968;SRP=2105;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:81:81,0:81:2816:0:0:0,-24.3834,-253.681 0/0:112:112,0:112:3809:0:0:0,-33.7154,-343.011 0/0:80:80,0:80:2867:0:0:0,-24.0824,-258.231 0/1:104:86,18:86:3097:18:670:-29.3197,0,-247.608 0/0:311:308,1:308:11089:1:8:0,-92.3532,-996.814 0/0:302:301,0:301:10863:0:0:0,-90.61,-977.324 dDocent_Contig_7834 16 . A C 961.326 . AB=0.312;ABP=41.3846;AC=5;AF=0.416667;AN=12;AO=39;CIGAR=1X;DP=136;DPB=136;DPRA=2.27273;EPP=87.6977;EPPR=213.643;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.820513;PAIREDR=0.71134;PAO=0;PQA=0;PQR=0;PRO=0;QA=1563;QR=3838;RO=97;RPL=0;RPP=87.6977;RPPR=213.643;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=97;SRP=213.643;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:20,11:20:793:11:446:-31.164,0,-62.3564 0/1:41:26,15:26:1023:15:594:-41.4505,0,-80.0226 0/1:6:3,3:3:118:3:123:-9.65861,0,-9.1954 0/1:15:8,7:8:322:7:280:-21.0561,0,-24.8329 0/0:11:11,0:11:435:0:0:0,-3.31133,-39.5045 0/1:32:29,3:29:1147:3:120:-1.55473,0,-93.8824 dDocent_Contig_7835 17 . C G 63.6423 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=67;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:67:-6.36314,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_7836 25 . G A 45.5283 . AB=0.106667;ABP=103.796;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=521;DPB=521;DPRA=0.772109;EPP=31.2394;EPPR=1106.12;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.769231;PAIREDR=0.712598;PAO=0;PQA=0;PQR=0;PRO=0;QA=509;QR=20272;RO=508;RPL=0;RPP=31.2394;RPPR=1106.12;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=508;SRP=1106.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:75:67,8:67:2656:8:311:-5.77466,0,-216.599 0/0:86:82,4:82:3277:4:157:0,-11.3807,-280.487 0/0:66:65,1:65:2608:1:41:0,-15.7734,-230.739 0/0:82:82,0:82:3266:0:0:0,-24.6845,-294.002 0/0:85:85,0:85:3402:0:0:0,-25.5875,-306.221 0/0:127:127,0:127:5063:0:0:0,-38.2308,-455.547 dDocent_Contig_7837 14 . C A 2948.91 . AB=0.27451;ABP=205.724;AC=5;AF=0.416667;AN=12;AO=128;CIGAR=1X2M2X;DP=494;DPB=494;DPRA=0;EPP=280.959;EPPR=736.968;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.997041;PAO=0;PQA=0;PQR=0;PRO=0;QA=4891;QR=13161;RO=338;RPL=0;RPP=280.959;RPPR=736.968;RPR=128;RUN=1;SAF=128;SAP=280.959;SAR=0;SRF=338;SRP=736.968;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:55:35,0,20:35:1355:0,20:0,759:-52.0774,-62.6134,-173.911,0,-111.68,-105.659 0|0:35:33,0,2:33:1303:0,2:0,79:0,-9.93399,-117.148,-3.03842,-110.647,-110.044 0|1:26:19,0,7:19:758:0,7:0,260:-15.9217,-21.6413,-84.0875,0,-62.8247,-60.7175 0|1:88:70,0,18:70:2695:0,18:0,683:-35.3059,-56.378,-277.63,0,-221.632,-216.213 0|1:142:84,0,51:84:3268:0,51:0,1967:-136.243,-161.529,-430.08,0,-268.558,-253.205 0|1:148:97,16,30:97:3782:16,30:593,1143:-64.5651,-45.2506,-351.275,0,-262.34,-301.822 dDocent_Contig_7838 14 . T C 5854.14 . AB=0.306061;ABP=110.821;AC=5;AF=0.416667;AN=12;AO=101;CIGAR=1X2M;DP=330;DPB=330;DPRA=0;EPP=222.329;EPPR=211.472;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4008;QR=3796;RO=96;RPL=0;RPP=222.329;RPPR=211.472;RPR=101;RUN=1;SAF=101;SAP=222.329;SAR=0;SRF=96;SRP=211.472;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:53:34,0,3,16:34:1354:0,3,16:0,117,646:-43.0305,-53.2655,-164.756,-43.6502,-155.139,-154.236,0,-111.5,-101.883,-106.683 0|1:43:19,0,5,19:19:750:0,5,19:0,202,744:-55.4424,-61.162,-122.869,-44.5062,-106.215,-104.71,0,-61.7,-45.0448,-55.9804 0|1:36:14,2,4,15:14:552:2,4,15:81,157,607:-45.8378,-43.3728,-88.1803,-37.1442,-75.873,-81.3484,0,-38.73,-32.5006,-40.8946 0|1:53:19,0,16,18:19:738:0,16,18:0,640,722:-53.7688,-59.4883,-120.117,-6.77409,-67.4004,-62.5839,0,-60.6265,-7.90647,-55.208 0|0:57:10,0,37,9:10:402:0,37,9:0,1451,339:-116.306,-119.316,-152.447,0,-33.1407,-22.0026,-91.5497,-124.68,-5.38178,-121.971 0|1:88:0,0,63,24:0:0:0,63,24:0,2481,950:-282.251,-282.251,-282.251,-78.1695,-78.1695,-59.2046,-204.067,-204.067,0,-196.843 dDocent_Contig_7839 7 . T C 11518.5 . AB=0.164577;ABP=626.488;AC=1;AF=0.0833333;AN=12;AO=105;CIGAR=1X3M1X;DP=1069;DPB=1069;DPRA=0;EPP=231.015;EPPR=1093.09;GTI=0;LEN=1;MEANALT=3.25;MQM=56.8952;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.990476;PAIREDR=0.998008;PAO=0;PQA=0;PQR=0;PRO=0;QA=4018;QR=19259;RO=502;RPL=0;RPP=231.015;RPPR=1093.09;RPR=105;RUN=1;SAF=105;SAP=231.015;SAR=0;SRF=502;SRP=1093.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:145:64,18,0,61:64:2428:18,0,61:692,0,2324:-171.368,-133.821,-327.488,-190.634,-332.907,-389.718,0,-142.279,-199.092,-180.729 0|0:150:88,10,13,38:88:3374:10,13,38:385,496,1488:-95.8723,-90.7522,-364.666,-81.6737,-326.986,-354.684,0,-245.318,-236.238,-265.49 0|0:286:196,7,0,82:196:7555:7,0,82:273,0,3173:-201.632,-238.192,-856.469,-260.634,-858.576,-881.017,0,-597.944,-620.385,-595.701 0|0:211:67,23,26,94:67:2564:23,26,94:889,990,3628:-277.773,-224.922,-428.405,-216.739,-354.126,-419.319,0,-137.388,-129.205,-182.111 0|0:116:30,0,4,81:30:1151:0,4,81:0,150,3154:-250.207,-259.238,-353.713,-246.953,-341.428,-340.224,0,-94.4965,-82.2113,-70.1131 0|1:161:57,0,62,42:57:2187:0,62,42:0,2382,1629:-166.223,-183.382,-362.898,0,-179.51,-160.846,-49.5354,-229.058,-45.6714,-216.414 dDocent_Contig_7840 124 . A G 2644.78 . AB=0.489247;ABP=3.19709;AC=6;AF=0.5;AN=12;AO=91;CIGAR=1X;DP=186;DPB=186;DPRA=0;EPP=200.614;EPPR=209.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.736264;PAIREDR=0.726316;PAO=0;PQA=0;PQR=0;PRO=0;QA=3663;QR=3773;RO=95;RPL=91;RPP=200.614;RPPR=209.3;RPR=0;RUN=1;SAF=0;SAP=200.614;SAR=91;SRF=0;SRP=209.3;SRR=95;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:12,12:12:477:12:480:-36.324,0,-36.0531 0/1:32:25,7:25:996:7:282:-16.1185,0,-80.3031 0/1:28:6,22:6:241:22:880:-71.0812,0,-13.6363 0/1:34:15,19:15:606:19:764:-58.8461,0,-44.6428 0/1:27:12,15:12:476:15:607:-46.8394,0,-35.061 0/1:41:25,16:25:977:16:650:-46.4907,0,-75.8712 dDocent_Contig_7841 10 . A C 820.235 . AB=0.160535;ABP=302.289;AC=2;AF=0.166667;AN=12;AO=48;CIGAR=1X;DP=1050;DPB=1050;DPRA=0.796272;EPP=107.241;EPPR=2170.14;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.98497;PAO=0;PQA=0;PQR=0;PRO=0;QA=1938;QR=39761;RO=998;RPL=0;RPP=107.241;RPPR=2170.14;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=998;SRP=2170.14;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:154:131,21:131:5235:21:850:-30.6908,0,-424.894 0/0:137:137,0:137:5462:0:0:0,-41.2411,-491.417 0/1:145:118,27:118:4673:27:1088:-54.5546,0,-376.841 0/0:195:193,0:193:7639:0:0:0,-58.0988,-686.731 0/0:225:225,0:225:8966:0:0:0,-67.7317,-806.415 0/0:194:194,0:194:7786:0:0:0,-58.3998,-700.315 dDocent_Contig_7842 42 . C G 9636.94 . AB=0.465887;ABP=8.19559;AC=6;AF=0.5;AN=12;AO=239;CIGAR=1X2M1X;DP=513;DPB=513;DPRA=0;EPP=521.992;EPPR=215.815;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.958159;PAIREDR=0.979592;PAO=0;PQA=0;PQR=0;PRO=0;QA=9261;QR=3895;RO=98;RPL=0;RPP=521.992;RPPR=215.815;RPR=239;RUN=1;SAF=239;SAP=521.992;SAR=0;SRF=98;SRP=215.815;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:63:16,29,17:16:639:29,17:1120,681:-90.6314,-3.47227,-47.3774,-39.3391,0,-86.859 1|0:61:9,37,15:9:359:37,15:1406,594:-131.882,-19.3142,-37.743,-85.7041,0,-110.758 1|0:61:15,23,22:15:596:23,22:897,870:-91.7317,-22.5196,-64.6653,-24.6548,0,-67.1034 0|1:77:16,46,14:16:640:46,14:1791,542:-142.383,0,-38.8827,-102.688,-8.22204,-151.197 1|0:127:22,49,55:22:867:49,55:1919,2125:-254.343,-103.166,-159.748,-86.4708,0,-141.245 1|0:124:20,55,49:20:794:55,49:2128,1950:-263.945,-95.1912,-143.999,-109.406,0,-160.022 dDocent_Contig_7843 22 . T G 137.857 . AB=0.149254;ABP=74.6041;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=222;DPB=222;DPRA=1.13462;EPP=33.4109;EPPR=454.677;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.785714;PAIREDR=0.793269;PAO=0;PQA=0;PQR=0;PRO=0;QA=555;QR=8343;RO=208;RPL=0;RPP=33.4109;RPPR=454.677;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=208;SRP=454.677;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:32,3:32:1290:3:120:-0.65164,0,-105.827 0/0:35:35,0:35:1416:0:0:0,-10.536,-127.688 0/1:32:25,7:25:993:7:273:-15.3051,0,-80.0338 0/0:51:47,4:47:1872:4:162:0,-0.385783,-153.717 0/0:35:35,0:35:1402:0:0:0,-10.536,-126.433 0/0:34:34,0:34:1370:0:0:0,-10.235,-123.557 dDocent_Contig_7844 43 . A T 86.635 . AB=0.363636;ABP=4.78696;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=142;DPB=142;DPRA=0.419847;EPP=11.6962;EPPR=302.673;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=146;QR=4834;RO=138;RPL=0;RPP=11.6962;RPPR=302.673;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=138;SRP=302.673;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:666:0:0:0,-5.71957,-60.2624 0/0:41:41,0:41:1412:0:0:0,-12.3422,-127.373 0/0:19:19,0:19:689:0:0:0,-5.71957,-62.3397 0/0:40:40,0:40:1384:0:0:0,-12.0412,-124.847 0/1:11:7,4:7:250:4:146:-10.1864,0,-19.534 0/0:12:12,0:12:433:0:0:0,-3.61236,-39.3105 dDocent_Contig_7845 29 . A C 268.67 . AB=0.2;ABP=53.8228;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=516;DPB=516;DPRA=0.720621;EPP=31.2394;EPPR=1095.26;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994036;PAO=0;PQA=0;PQR=0;PRO=0;QA=529;QR=20141;RO=503;RPL=0;RPP=31.2394;RPPR=1095.26;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=503;SRP=1095.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:57:57,0:57:2271:0:0:0,-17.1587,-204.555 0/0:135:135,0:135:5397:0:0:0,-40.639,-485.57 0/0:97:97,0:97:3905:0:0:0,-29.1999,-351.439 0/0:108:108,0:108:4325:0:0:0,-32.5112,-389.204 0/0:54:54,0:54:2146:0:0:0,-16.2556,-193.321 0/1:65:52,13:52:2097:13:529:-28.3899,0,-169.34 dDocent_Contig_7846 27 . A G 180.324 . AB=0.157895;ABP=80.269;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=217;DPB=217;DPRA=1.07801;EPP=29.068;EPPR=445.991;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.612745;PAO=0;PQA=0;PQR=0;PRO=0;QA=482;QR=8132;RO=204;RPL=0;RPP=29.068;RPPR=445.991;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=204;SRP=445.991;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:31,5:31:1233:5:201:-7.63381,0,-100.401 0/0:39:39,0:39:1541:0:0:0,-11.7402,-138.935 0/0:28:28,0:28:1114:0:0:0,-8.42884,-100.542 0/1:40:33,7:33:1309:7:281:-13.6205,0,-106.027 0/0:29:28,0:28:1128:0:0:0,-8.42884,-101.69 0/0:45:45,0:45:1807:0:0:0,-13.5463,-162.839 dDocent_Contig_7847 20 . A C 41.0056 . AB=0.0961538;ABP=150.336;AC=1;AF=0.0833333;AN=12;AO=29;CIGAR=1X;DP=772;DPB=772;DPRA=0.799663;EPP=65.983;EPPR=1616.41;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995962;PAO=0;PQA=0;PQR=0;PRO=0;QA=1167;QR=29359;RO=743;RPL=0;RPP=65.983;RPPR=1616.41;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=743;SRP=1616.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:104:94,10:94:3686:10:403:-5.32237,0,-300.46 0/0:161:154,7:154:6085:7:284:0,-22.5324,-521.515 0/0:63:60,3:60:2375:3:122:0,-7.5924,-202.525 0/0:108:108,0:108:4273:0:0:0,-32.5112,-384.529 0/0:189:189,0:189:7469:0:0:0,-56.8947,-671.848 0/0:147:138,9:138:5471:9:358:0,-11.6693,-459.667 dDocent_Contig_7848 15 . G A 1609.74 . AB=0.303738;ABP=74.608;AC=3;AF=0.25;AN=12;AO=74;CIGAR=1X;DP=588;DPB=588;DPRA=0.9;EPP=163.699;EPPR=1119.15;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.878378;PAIREDR=0.916342;PAO=0;PQA=0;PQR=0;PRO=0;QA=2893;QR=20248;RO=514;RPL=0;RPP=163.699;RPPR=1119.15;RPR=74;RUN=1;SAF=74;SAP=163.699;SAR=0;SRF=514;SRP=1119.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:78:47,31:47:1840:31:1187:-83.6238,0,-142.34 0/1:40:33,7:33:1298:7:285:-13.9832,0,-105.051 0/1:96:69,27:69:2697:27:1080:-68.5893,0,-213.971 0/0:164:155,9:155:6121:9:341:0,-18.3268,-519.669 0/0:143:143,0:143:5678:0:0:0,-43.0473,-510.86 0/0:67:67,0:67:2614:0:0:0,-20.169,-235.41 dDocent_Contig_7849 55 . G A 144.347 . AB=0.137405;ABP=152.61;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X;DP=369;DPB=369;DPRA=0.908397;EPP=50.7827;EPPR=756.511;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.363636;PAIREDR=0.443804;PAO=0;PQA=0;PQR=0;PRO=0;QA=786;QR=13065;RO=347;RPL=15;RPP=9.32731;RPPR=88.6739;RPR=7;RUN=1;SAF=15;SAP=9.32731;SAR=7;SRF=232;SRP=88.6739;SRR=115;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:60:60,0:60:2224:0:0:0,-18.0618,-200.365 0/1:87:75,12:75:2877:12:405:-10.5702,0,-232.888 0/1:44:38,6:38:1372:6:222:-7.08629,0,-110.49 0/0:71:71,0:71:2660:0:0:0,-21.3731,-239.572 0/0:63:60,3:60:2297:3:118:0,-7.96238,-195.921 0/0:44:43,1:43:1635:1:41:0,-9.15075,-143.307 dDocent_Contig_7850 138 . T G 42.982 . AB=0.153846;ABP=30.0702;AC=2;AF=0.166667;AN=12;AO=4;CIGAR=1X;DP=58;DPB=58;DPRA=1.625;EPP=11.6962;EPPR=120.27;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.796296;PAO=0;PQA=0;PQR=0;PRO=0;QA=153;QR=2053;RO=54;RPL=0;RPP=11.6962;RPPR=120.27;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=120.27;SRR=54;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:335:0:0:0,-2.70927,-30.5002 0/0:6:6,0:6:234:0:0:0,-1.80618,-21.4311 0/0:6:6,0:6:227:0:0:0,-1.80618,-20.792 0/0:11:11,0:11:407:0:0:0,-3.31133,-36.975 0/1:10:9,1:9:345:1:39:-0.886264,0,-28.3982 0/1:16:13,3:13:505:3:114:-5.8155,0,-40.9826 dDocent_Contig_7852 58 . G T 550.624 . AB=0.375;ABP=10.6105;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X;DP=122;DPB=122;DPRA=1.4898;EPP=50.7827;EPPR=220.158;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=868;QR=3956;RO=100;RPL=22;RPP=50.7827;RPPR=220.158;RPR=0;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=100;SRP=220.158;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:13:13,0:13:513:0:0:0,-3.91339,-46.5161 0/1:28:17,11:17:670:11:433:-30.8949,0,-52.2044 0/1:28:18,10:18:715:10:394:-27.3893,0,-56.2471 0/0:17:16,1:16:645:1:41:0,-1.02294,-54.2901 0/0:22:22,0:22:861:0:0:0,-6.62266,-77.8039 0/0:14:14,0:14:552:0:0:0,-4.21442,-50.0208 dDocent_Contig_7854 10 . T G 3573.26 . AB=0.236173;ABP=407.472;AC=5;AF=0.416667;AN=12;AO=170;CIGAR=1X;DP=819;DPB=819;DPRA=0;EPP=372.161;EPPR=1412.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998459;PAO=0;PQA=0;PQR=0;PRO=0;QA=6762;QR=25878;RO=649;RPL=0;RPP=372.161;RPPR=1412.3;RPR=170;RUN=1;SAF=170;SAP=372.161;SAR=0;SRF=649;SRP=1412.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:103:79,24:79:3177:24:952:-54.9762,0,-254.994 0/1:122:71,51:71:2843:51:2033:-146.438,0,-219.248 0/1:164:120,44:120:4788:44:1743:-107.727,0,-381.449 0/1:142:130,12:130:5185:12:477:-0.532188,0,-423.766 0/0:150:138,12:138:5507:12:483:0,-1.3327,-451.642 0/1:138:111,27:111:4378:27:1074:-55.4045,0,-352.423 dDocent_Contig_7855 46 . A G 627.565 . AB=0.262136;ABP=53.6288;AC=4;AF=0.333333;AN=12;AO=27;CIGAR=1X;DP=160;DPB=160;DPRA=0.903509;EPP=61.6401;EPPR=291.816;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1086;QR=5284;RO=133;RPL=0;RPP=61.6401;RPPR=291.816;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=133;SRP=291.816;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:18:16,2:16:652:2:80:-2.17325,0,-53.5942 0/1:12:11,1:11:431:1:39:-0.284205,0,-35.5271 0/1:14:8,6:8:327:6:243:-18.0338,0,-25.5857 0/1:59:41,18:41:1633:18:724:-47.7241,0,-129.438 0/0:14:14,0:14:562:0:0:0,-4.21442,-50.9222 0/0:43:43,0:43:1679:0:0:0,-12.9443,-151.337 dDocent_Contig_7856 19 . T G 1513.62 . AB=0.214706;ABP=243.38;AC=5;AF=0.416667;AN=12;AO=74;CIGAR=1X;DP=476;DPB=476;DPRA=1.26296;EPP=163.699;EPPR=875.942;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2863;QR=15006;RO=402;RPL=0;RPP=163.699;RPPR=875.942;RPR=74;RUN=1;SAF=74;SAP=163.699;SAR=0;SRF=402;SRP=875.942;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:123:93,30:93:3439:30:1187:-70.0868,0,-272.623 0/0:120:120,0:120:4533:0:0:0,-36.1236,-408.03 0/1:81:60,21:60:2271:21:773:-45.4942,0,-180.189 0/1:136:114,22:114:4295:22:867:-37.4037,0,-345.659 1/1:1:0,1:0:0:1:36:-3.59827,-0.30103,0 0/0:15:15,0:15:468:0:0:0,-4.51545,-42.402 dDocent_Contig_7857 38 . T A 582.56 . AB=0.118182;ABP=142.3;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1M1X8M;DP=158;DPB=149.2;DPRA=0;EPP=31.2394;EPPR=263.587;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.615385;PAIREDR=0.708333;PAO=0;PQA=0;PQR=0;PRO=0;QA=519;QR=4649;RO=120;RPL=0;RPP=31.2394;RPPR=263.587;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=120;SRP=263.587;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:28:23,3,2,0:23:876:3,2,0:112,76,0:-2.24281,0,-70.9481,-2.93206,-65.6195,-74.187,-9.1665,-71.8512,-74.789,-81.0209 0|0:28:18,8,2,0:18:707:8,2,0:308,81,0:-19.8543,0,-55.732,-18.5897,-51.4599,-76.1442,-25.2728,-58.1403,-76.7462,-83.4264 0|1:17:13,0,3,0:13:514:0,3,0:0,117,0:-5.9279,-9.84129,-52.2031,0,-42.5837,-41.6806,-9.84129,-52.2031,-42.5837,-52.2031 0|1:37:30,0,6,0:30:1162:0,6,0:0,245,0:-11.457,-20.4879,-115.961,0,-95.7408,-93.9346,-20.4879,-115.961,-95.7408,-115.961 0|0:20:15,0,0,5:15:586:0,0,5:0,0,203:-12.6325,-17.1479,-65.3125,-17.1479,-65.3125,-65.3125,0,-48.5663,-48.5663,-47.0612 0|0:28:21,0,0,7:21:804:0,0,7:0,0,282:-17.3238,-23.6454,-89.6067,-23.6454,-89.6067,-89.6067,0,-66.3588,-66.3588,-64.2516 dDocent_Contig_7858 13 . G T 581.554 . AB=0.117647;ABP=650.62;AC=4;AF=0.333333;AN=12;AO=61;CIGAR=1X;DP=976;DPB=976;DPRA=0.556589;EPP=135.47;EPPR=1989.91;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9945;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.854645;PAO=0;PQA=0;PQR=0;PRO=0;QA=2442;QR=36325;RO=915;RPL=0;RPP=135.47;RPPR=1989.91;RPR=61;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=915;SRP=1989.91;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:114:102,12:102:4032:12:486:-9.77385,0,-328.55 0/1:214:194,20:194:7681:20:796:-7.53653,0,-626.466 0/1:109:87,22:87:3420:22:873:-46.0643,0,-275.044 0/1:73:67,6:67:2649:6:246:-0.54493,0,-216.556 0/0:258:258,0:258:10262:0:0:0,-77.6657,-922.914 0/0:208:207,1:207:8281:1:41:0,-58.5197,-740.722 dDocent_Contig_7859 54 . G A 92.952 . AB=0.118182;ABP=142.3;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=249;DPB=249;DPRA=1.58273;EPP=31.2394;EPPR=515.478;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.153846;PAIREDR=0.415254;PAO=0;PQA=0;PQR=0;PRO=0;QA=499;QR=9343;RO=236;RPL=13;RPP=31.2394;RPPR=515.478;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=236;SRP=515.478;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:34,0:34:1342:0:0:0,-10.235,-121.048 0/1:54:48,6:48:1920:6:215:-3.43831,0,-156.749 0/0:21:21,0:21:821:0:0:0,-6.32163,-74.2065 0/1:56:49,7:49:1937:7:284:-9.07611,0,-157.683 0/0:35:35,0:35:1377:0:0:0,-10.536,-124.184 0/0:49:49,0:49:1946:0:0:0,-14.7505,-175.342 dDocent_Contig_7860 116 . A T 196.28 . AB=0.238806;ABP=42.7126;AC=5;AF=0.416667;AN=12;AO=16;CIGAR=1X;DP=80;DPB=80;DPRA=1.03077;EPP=37.7539;EPPR=141.985;GTI=0;LEN=1;MEANALT=1;MQM=43.625;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=533;QR=2160;RO=64;RPL=0;RPP=37.7539;RPPR=141.985;RPR=16;RUN=1;SAF=0;SAP=37.7539;SAR=16;SRF=0;SRP=141.985;SRR=64;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:16,3:16:542:3:105:-3.93628,0,-43.383 0/1:13:11,2:11:376:2:69:-2.55339,0,-30.2569 0/1:5:2,3:2:70:3:103:-7.9829,0,-5.14225 0/1:19:13,6:13:437:6:186:-11.1118,0,-33.9338 0/1:11:9,2:9:310:2:70:-3.24086,0,-24.923 0/0:13:13,0:13:425:0:0:0,-3.91339,-38.5645 dDocent_Contig_7861 40 . G C 8441.39 . AB=0.270575;ABP=408.537;AC=8;AF=0.666667;AN=12;AO=240;CIGAR=1X6M;DP=887;DPB=886.857;DPRA=0;EPP=524.164;EPPR=893.314;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8794;QR=14679;RO=410;RPL=0;RPP=524.164;RPPR=893.314;RPR=240;RUN=1;SAF=240;SAP=524.164;SAR=0;SRF=410;SRP=893.314;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:161:76,17,65,3:76:2732:17,65,3:635,2372,116:-170.886,-141.77,-359.517,0,-170.86,-203.288,-184.236,-355.106,-213.326,-406.197 0|1:160:83,23,43,6:83:2957:23,43,6:854,1601,183:-106.071,-61.1712,-295.25,0,-171.122,-228.064,-116.417,-287.531,-226.366,-355.609 0|1:127:78,7,42,0:78:2765:7,42,0:268,1530,0:-101.464,-102.948,-326.077,0,-203.22,-212.574,-124.945,-328.184,-225.217,-350.18 0|1:194:121,33,24,11:121:4345:33,24,11:1245,900,439:-65.6113,0,-344.472,-28.317,-280.684,-375.498,-65.8767,-318.248,-346.566,-416.976 1|1:138:27,84,27,0:27:978:84,27,0:3144,986,0:-250.067,-0.712806,-55.2701,-177.642,0,-249.357,-258.195,-80.5567,-257.485,-338.039 1|1:107:25,42,39,0:25:902:42,39,0:1561,1405,0:-161.247,-41.0182,-101.984,-54.1499,0,-116.014,-168.772,-114.627,-127.755,-242.38 dDocent_Contig_7862 17 . G C 13603.2 . AB=0.793621;ABP=402.142;AC=6;AF=0.5;AN=12;AO=423;CIGAR=1X;DP=533;DPB=533;DPRA=0;EPP=921.543;EPPR=241.872;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.983452;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=17016;QR=4372;RO=110;RPL=0;RPP=921.543;RPPR=241.872;RPR=423;RUN=1;SAF=423;SAP=921.543;SAR=0;SRF=110;SRP=241.872;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:107:28,79:28:1115:79:3150:-251.35,0,-68.4245 0/1:114:22,92:22:884:92:3726:-301.018,0,-45.5509 0/1:79:12,67:12:470:67:2707:-219.95,0,-18.8615 0/1:116:23,93:23:907:93:3737:-301.397,0,-47.0115 0/1:67:19,48:19:756:48:1929:-153.631,0,-48.1938 0/1:50:6,44:6:240:44:1767:-144.193,0,-6.92304 dDocent_Contig_7863 53 . G T 618.066 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=18;CIGAR=1X;DP=387;DPB=387;DPRA=0.258152;EPP=42.0968;EPPR=804.284;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.940379;PAO=0;PQA=0;PQR=0;PRO=0;QA=720;QR=14475;RO=369;RPL=18;RPP=42.0968;RPPR=804.284;RPR=0;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=369;SRP=804.284;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:144:144,0:144:5587:0:0:0,-43.3483,-502.682 0/0:81:81,0:81:3193:0:0:0,-24.3834,-287.451 0/0:33:33,0:33:1314:0:0:0,-9.93399,-118.525 0/0:74:74,0:74:2925:0:0:0,-22.2762,-263.346 1/1:19:1,18:1:38:18:720:-61.3295,-1.9223,0 0/0:36:36,0:36:1418:0:0:0,-10.8371,-127.874 dDocent_Contig_7864 26 . C T 160.512 . AB=0.169492;ABP=58.9901;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=219;DPB=219;DPRA=0.904348;EPP=26.8965;EPPR=454.677;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.909091;PAIREDR=0.826923;PAO=0;PQA=0;PQR=0;PRO=0;QA=444;QR=8406;RO=208;RPL=0;RPP=26.8965;RPPR=454.677;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=208;SRP=454.677;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:18:14,4:14:553:4:164:-9.73136,0,-44.6918 0/0:45:44,1:44:1791:1:41:0,-9.45178,-157.299 0/0:35:35,0:35:1407:0:0:0,-10.536,-126.869 0/1:41:35,6:35:1418:6:239:-9.54166,0,-115.526 0/0:41:41,0:41:1660:0:0:0,-12.3422,-149.621 0/0:39:39,0:39:1577:0:0:0,-11.7402,-142.158 dDocent_Contig_7865 1 . N G 77.8076 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_7866 22 . T C 1698.99 . AB=0.0365854;ABP=308.923;AC=0;AF=0;AN=12;AO=7;CIGAR=13M1X2M;DP=308;DPB=287.5;DPRA=0;EPP=18.2106;EPPR=472.048;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.949074;PAO=0;PQA=0;PQR=0;PRO=0;QA=276;QR=8382;RO=216;RPL=0;RPP=18.2106;RPPR=472.048;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=216;SRP=472.048;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:44:28,15,0:28:1082:15,0:531,0:-34.7865,0,-84.347,-43.2153,-88.8624,-132.1 0|0:73:40,31,1:40:1543:31,1:1126,40:-80.0081,0,-117.504,-88.7528,-123.54,-215.175 0|0:46:25,16,4:25:974:16,4:597,155:-41.3374,0,-75.236,-36.128,-67.3201,-114.987 0|0:49:44,4,1:44:1719:4,1:152,41:0,-0.803748,-140.903,-9.85529,-138.722,-150.886 0|0:51:42,9,0:42:1624:9,0:314,0:-13.2393,0,-131.065,-25.8826,-133.774,-159.301 0|0:45:37,7,1:37:1440:7,1:256,40:-9.74913,0,-116.225,-17.5879,-115.037,-135.65 dDocent_Contig_7867 1 . N G 525.907 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=16;CIGAR=1X;DP=16;DPB=16;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=553;QR=0;RO=0;RPL=0;RPP=37.7539;RPPR=0;RPR=16;RUN=1;SAF=2;SAP=22.5536;SAR=14;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:6:0,6:0:0:6:209:-19.1511,-1.80618,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:4:0,4:0:0:4:141:-13.0369,-1.20412,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:2:0,2:0:0:2:64:-6.07837,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_7869 9 . A C 3417.85 . AB=0.193583;ABP=765.532;AC=4;AF=0.333333;AN=12;AO=195;CIGAR=1X;DP=1369;DPB=1369;DPRA=1.42012;EPP=426.447;EPPR=2552.32;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998296;PAO=0;PQA=0;PQR=0;PRO=0;QA=7544;QR=44861;RO=1174;RPL=0;RPP=426.447;RPPR=2552.32;RPR=195;RUN=1;SAF=195;SAP=426.447;SAR=0;SRF=1174;SRP=2552.32;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:210:175,35:175:6709:35:1358:-59.2844,0,-540.496 0/0:265:251,14:251:9594:14:550:0,-29.9269,-813.309 0/1:203:164,39:164:6292:39:1505:-74.6121,0,-505.093 0/1:274:243,31:243:9245:31:1205:-26.2597,0,-749.301 0/0:169:169,0:169:6440:0:0:0,-50.8741,-579.516 0/1:248:172,76:172:6581:76:2926:-188.85,0,-517.54 dDocent_Contig_7870 19 . G T 1080.92 . AB=0.180645;ABP=277.625;AC=1;AF=0.0833333;AN=12;AO=56;CIGAR=1X;DP=1950;DPB=1950;DPRA=0.945122;EPP=124.613;EPPR=4115.78;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.6109;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.971489;PAO=0;PQA=0;PQR=0;PRO=0;QA=2253;QR=75255;RO=1894;RPL=0;RPP=124.613;RPPR=4115.78;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=1894;SRP=4115.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:214:214,0:214:8515:0:0:0,-64.4204,-765.589 0/0:247:247,0:247:9744:0:0:0,-74.3544,-876.142 0/0:115:115,0:115:4557:0:0:0,-34.6184,-409.792 0/1:310:254,56:254:10065:56:2253:-109.615,0,-804.989 0/0:381:381,0:381:15134:0:0:0,-114.692,-1360.68 0/0:683:683,0:683:27240:0:0:0,-205.603,-2448.4 dDocent_Contig_7871 72 . G A 77.1827 . AB=0.230769;ABP=19.3799;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=100;DPB=100;DPRA=0.702703;EPP=16.0391;EPPR=207.129;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.755319;PAO=0;PQA=0;PQR=0;PRO=0;QA=201;QR=3190;RO=94;RPL=6;RPP=16.0391;RPPR=207.129;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=94;SRP=207.129;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:14:10,4:10:338:4:133:-8.0844,0,-26.5339 0/1:12:10,2:10:323:2:68:-2.84552,0,-25.773 0/0:13:13,0:13:453:0:0:0,-3.91339,-41.1018 0/0:25:25,0:25:848:0:0:0,-7.52575,-76.6283 0/0:13:13,0:13:461:0:0:0,-3.91339,-41.8262 0/0:23:23,0:23:767:0:0:0,-6.92369,-69.3394 dDocent_Contig_7872 9 . A G 241.476 . AB=0.213115;ABP=46.6177;AC=2;AF=0.166667;AN=12;AO=18;CIGAR=1X;DP=182;DPB=182;DPRA=1.56818;EPP=42.0968;EPPR=359.132;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=0.841463;PAO=0;PQA=0;PQR=0;PRO=0;QA=694;QR=6255;RO=164;RPL=0;RPP=42.0968;RPPR=359.132;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=164;SRP=359.132;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:29,6:29:1106:6:230:-10.5307,0,-89.3069 0/0:29:27,2:27:1043:2:78:0,-1.3264,-86.7748 0/0:48:45,3:45:1701:3:116:0,-3.63173,-142.528 0/1:26:19,7:19:729:7:270:-16.8387,0,-58.1128 0/0:23:23,0:23:884:0:0:0,-6.92369,-79.8798 0/0:21:21,0:21:792:0:0:0,-6.32163,-71.6023 dDocent_Contig_7873 7 . T G 82.2437 . AB=0.189189;ABP=34.0565;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=135;DPB=135;DPRA=1.06977;EPP=24.725;EPPR=274.444;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.9;PAIREDR=0.864;PAO=0;PQA=0;PQR=0;PRO=0;QA=351;QR=4806;RO=125;RPL=0;RPP=24.725;RPPR=274.444;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=125;SRP=274.444;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:14,1:14:539:1:33:0,-1.21631,-45.5559 0/0:29:29,0:29:1116:0:0:0,-8.72987,-100.743 0/1:28:25,3:25:968:3:117:-2.48154,0,-79.0048 0/0:40:38,2:38:1451:2:75:0,-4.92086,-123.749 0/0:14:14,0:14:539:0:0:0,-4.21442,-48.8552 0/1:9:5,4:5:193:4:126:-8.94139,0,-15.0321 dDocent_Contig_7876 107 . N C 77.9498 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=77;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:36:-3.59827,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:41:-3.89396,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_7877 7 . T C 2603.84 . AB=0.623377;ABP=23.3714;AC=5;AF=0.416667;AN=12;AO=96;CIGAR=1X;DP=162;DPB=162;DPRA=3.85;EPP=95.6598;EPPR=129.482;GTI=0;LEN=1;MEANALT=1;MQM=57.0312;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.53125;PAIREDR=0.787879;PAO=0;PQA=0;PQR=0;PRO=0;QA=3516;QR=2505;RO=66;RPL=0;RPP=211.472;RPPR=146.327;RPR=96;RUN=1;SAF=80;SAP=95.6598;SAR=16;SRF=64;SRP=129.482;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:14,20:14:509:20:746:-57.2006,0,-35.901 0/1:22:7,15:7:257:15:537:-41.986,0,-16.8584 0/1:36:12,24:12:463:24:889:-68.2381,0,-31.1842 0/1:38:17,21:17:661:21:742:-55.4194,0,-48.3881 0/0:8:8,0:8:303:0:0:0,-2.40824,-27.6278 0/1:24:8,16:8:312:16:602:-46.7613,0,-21.2202 dDocent_Contig_7878 19 . G A 1093.07 . AB=0.251185;ABP=116.472;AC=2;AF=0.166667;AN=12;AO=62;CIGAR=1X;DP=785;DPB=785;DPRA=1.08266;EPP=137.642;EPPR=1572.98;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.983871;PAIREDR=0.997234;PAO=0;PQA=0;PQR=0;PRO=0;QA=2280;QR=28702;RO=723;RPL=0;RPP=137.642;RPPR=1572.98;RPR=62;RUN=1;SAF=62;SAP=137.642;SAR=0;SRF=723;SRP=1572.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:98:95,3:95:3761:3:111:0,-19.147,-328.142 0/0:228:222,6:222:8785:6:220:0,-48.4794,-770.011 0/0:82:82,0:82:3231:0:0:0,-24.6845,-290.859 0/0:166:166,0:166:6609:0:0:0,-49.971,-594.52 0/1:89:57,32:57:2272:32:1178:-79.5359,0,-177.858 0/1:122:101,21:101:4044:21:771:-32.9925,0,-327.217 dDocent_Contig_7879 34 . G A 276.452 . AB=0.136364;ABP=205.155;AC=2;AF=0.166667;AN=12;AO=38;CIGAR=1X;DP=507;DPB=507;DPRA=1.51864;EPP=85.5263;EPPR=1021.43;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.368421;PAIREDR=0.402985;PAO=0;PQA=0;PQR=0;PRO=0;QA=1472;QR=18391;RO=469;RPL=0;RPP=85.5263;RPPR=1021.43;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=469;SRP=1021.43;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:80:79,1:79:3106:1:39:0,-20.1858,-275.73 0/1:104:94,10:94:3700:10:378:-3.05522,0,-301.737 0/0:59:59,0:59:2296:0:0:0,-17.7608,-206.815 0/0:106:98,8:98:3864:8:312:0,-3.46757,-319.33 0/1:72:58,14:58:2256:14:546:-27.8055,0,-181.546 0/0:86:81,5:81:3169:5:197:0,-7.78309,-267.205 dDocent_Contig_7880 24 . A G 10510.2 . AB=0.596522;ABP=49.5402;AC=6;AF=0.5;AN=12;AO=343;CIGAR=1X2M1X;DP=575;DPB=575;DPRA=0;EPP=747.825;EPPR=430.79;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.51312;PAIREDR=0.558376;PAO=0;PQA=0;PQR=0;PRO=0;QA=13624;QR=7775;RO=197;RPL=0;RPP=747.825;RPPR=430.79;RPR=343;RUN=1;SAF=343;SAP=747.825;SAR=0;SRF=197;SRP=430.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:90:23,63,4:23:908:63,4:2498,162:-198.684,0,-55.7382,-192.25,-61.3435,-265.757 0|1:139:48,82,9:48:1881:82,9:3257,365:-253.665,0,-129.973,-238.013,-124.554,-389.97 0|1:105:41,56,7:41:1612:56,7:2229,286:-171.194,0,-115.728,-159.935,-108.984,-290.414 0|1:116:26,80,10:26:1034:80,10:3192,408:-255.049,0,-61.0399,-229.212,-51.4566,-311.331 0|1:41:19,20,2:19:759:20,2:782,80:-58.5556,0,-56.4925,-57.6844,-55.9231,-119.6 0|1:84:40,42,2:40:1581:42,2:1666,78:-125.095,0,-117.46,-130.725,-123.692,-260.221 dDocent_Contig_7881 45 . C G 952.459 . AB=0.154047;ABP=401.161;AC=2;AF=0.166667;AN=12;AO=71;CIGAR=1X;DP=987;DPB=987;DPRA=0.989157;EPP=157.185;EPPR=1992.08;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.946507;PAO=0;PQA=0;PQR=0;PRO=0;QA=2836;QR=36535;RO=916;RPL=0;RPP=157.185;RPPR=1992.08;RPR=71;RUN=1;SAF=71;SAP=157.185;SAR=0;SRF=916;SRP=1992.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:163:162,1:162:6441:1:41:0,-44.9733,-575.336 0/0:145:138,7:138:5543:7:262:0,-19.7189,-474.752 0/0:130:126,4:126:5002:4:164:0,-23.984,-434.903 0/0:166:166,0:166:6584:0:0:0,-49.971,-592.283 0/1:194:164,30:164:6556:30:1208:-50.595,0,-531.357 0/1:189:160,29:160:6409:29:1161:-47.8727,0,-519.635 dDocent_Contig_7882 98 . C G 317.48 . AB=0.295775;ABP=28.7315;AC=5;AF=0.416667;AN=12;AO=21;CIGAR=1X;DP=84;DPB=84;DPRA=1.09231;EPP=48.6112;EPPR=139.813;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.809524;PAIREDR=0.793651;PAO=0;PQA=0;PQR=0;PRO=0;QA=674;QR=1904;RO=63;RPL=0;RPP=48.6112;RPPR=139.813;RPR=21;RUN=1;SAF=0;SAP=48.6112;SAR=21;SRF=0;SRP=139.813;SRR=63;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:10:8,2:8:241:2:68:-3.44763,0,-18.9776 0/1:4:3,1:3:89:1:34:-2.19479,0,-7.10138 0/0:13:13,0:13:403:0:0:0,-3.91339,-36.5732 0/1:18:14,4:14:417:4:136:-7.15743,0,-32.4037 0/1:18:14,4:14:429:4:131:-6.69562,0,-33.4911 0/1:21:11,10:11:325:10:305:-21.4281,0,-23.2198 dDocent_Contig_7883 71 . C T 5061.82 . AB=0.458128;ABP=9.19311;AC=6;AF=0.5;AN=12;AO=186;CIGAR=1X;DP=406;DPB=406;DPRA=0;EPP=406.904;EPPR=480.734;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.445455;PAO=0;PQA=0;PQR=0;PRO=0;QA=7088;QR=8488;RO=220;RPL=186;RPP=406.904;RPPR=29.6997;RPR=0;RUN=1;SAF=186;SAP=406.904;SAR=0;SRF=136;SRP=29.6997;SRR=84;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:31,23:31:1148:23:858:-61.2797,0,-87.3505 0/1:100:51,49:51:1946:49:1851:-136.736,0,-145.264 0/1:62:37,25:37:1466:25:949:-67.0371,0,-113.526 0/1:61:28,33:28:1053:33:1299:-98.8209,0,-76.7017 0/1:74:38,36:38:1482:36:1377:-101.919,0,-111.362 0/1:55:35,20:35:1393:20:754:-51.6115,0,-109.073 dDocent_Contig_7884 20 . C A 49.2449 . AB=0.102804;ABP=149.635;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=221;DPB=221;DPRA=1.87719;EPP=26.8965;EPPR=459.02;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.1905;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.957143;PAO=0;PQA=0;PQR=0;PRO=0;QA=440;QR=8353;RO=210;RPL=0;RPP=26.8965;RPPR=459.02;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=210;SRP=459.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:33,4:33:1308:4:162:-3.82864,0,-106.828 0/0:43:43,0:43:1725:0:0:0,-12.9443,-155.46 0/0:34:34,0:34:1373:0:0:0,-10.235,-123.823 0/1:70:63,7:63:2478:7:278:-4.31628,0,-202.083 0/0:21:21,0:21:820:0:0:0,-6.32163,-74.0991 0/0:16:16,0:16:649:0:0:0,-4.81648,-51.5856 dDocent_Contig_7885 20 . G C 212.296 . AB=0.109091;ABP=368.015;AC=2;AF=0.166667;AN=12;AO=32;CIGAR=1X;DP=598;DPB=598;DPRA=1.42105;EPP=72.4974;EPPR=1229.89;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99823;PAO=0;PQA=0;PQR=0;PRO=0;QA=1261;QR=21784;RO=565;RPL=0;RPP=72.4974;RPPR=1229.89;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=565;SRP=1229.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:107:96,11:96:3724:11:429:-6.75216,0,-303.009 0/0:95:95,0:95:3664:0:0:0,-28.5978,-329.835 0/0:72:72,0:72:2765:0:0:0,-21.6742,-249.001 0/1:168:149,19:149:5745:19:755:-17.6993,0,-466.369 0/0:80:79,0:79:3065:0:0:0,-23.7814,-275.727 0/0:76:74,2:74:2821:2:77:0,-15.5691,-246.719 dDocent_Contig_7886 18 . G A 1210 . AB=0.409091;ABP=10.9066;AC=4;AF=0.333333;AN=12;AO=47;CIGAR=1X;DP=175;DPB=175;DPRA=1.74444;EPP=105.07;EPPR=280.959;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.978723;PAIREDR=0.96875;PAO=0;PQA=0;PQR=0;PRO=0;QA=1855;QR=5101;RO=128;RPL=0;RPP=105.07;RPPR=280.959;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=128;SRP=280.959;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:12,7:12:488:7:276:-19.4884,0,-38.5517 0/0:47:45,2:45:1797:2:78:0,-6.74511,-154.541 0/1:24:18,6:18:726:6:243:-15.0232,0,-58.4405 0/0:18:18,0:18:709:0:0:0,-5.41854,-64.1353 0/1:26:7,19:7:280:19:753:-60.2611,0,-17.745 0/1:41:28,13:28:1101:13:505:-33.4493,0,-87.0311 dDocent_Contig_7887 108 . C A 145.643 . AB=0.285714;ABP=14.1779;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=77;DPB=77;DPRA=1.75;EPP=22.5536;EPPR=150.67;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.779412;PAO=0;PQA=0;PQR=0;PRO=0;QA=315;QR=1913;RO=68;RPL=0;RPP=22.5536;RPPR=150.67;RPR=9;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=150.67;SRR=68;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:3:3,0:3:83:0:0:0,-0.90309,-7.74594 0/0:14:14,0:14:387:0:0:0,-4.21442,-35.0997 0/0:11:11,0:11:319:0:0:0,-3.31133,-28.9955 0/0:21:20,1:20:579:1:35:0,-2.823,-48.8926 0/1:7:6,1:6:174:1:35:-1.39142,0,-13.8392 0/1:21:14,7:14:371:7:245:-16.0696,0,-27.3289 dDocent_Contig_7888 32 . G C 529.045 . AB=0.211382;ABP=92.0054;AC=1;AF=0.0833333;AN=12;AO=26;CIGAR=1X;DP=566;DPB=566;DPRA=1.38826;EPP=59.4686;EPPR=1175.61;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1013;QR=21555;RO=540;RPL=0;RPP=59.4686;RPPR=1175.61;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=540;SRP=1175.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:73:73,0:73:2885:0:0:0,-21.9752,-259.744 0/0:217:217,0:217:8700:0:0:0,-65.3235,-782.486 0/0:68:68,0:68:2672:0:0:0,-20.47,-240.599 0/1:123:97,26:97:3866:26:1013:-54.4274,0,-310.916 0/0:15:15,0:15:607:0:0:0,-4.51545,-54.9665 0/0:70:70,0:70:2825:0:0:0,-21.0721,-254.348 dDocent_Contig_7889 56 . T C 822.333 . AB=0.333333;ABP=22.5536;AC=6;AF=0.5;AN=12;AO=31;CIGAR=1X;DP=96;DPB=96;DPRA=1.54545;EPP=70.3259;EPPR=144.156;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1244;QR=2597;RO=65;RPL=31;RPP=70.3259;RPPR=144.156;RPR=0;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=65;SRP=144.156;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:15,4:15:600:4:161:-9.15591,0,-48.617 0/1:23:17,6:17:681:6:238:-14.8693,0,-54.6955 0/1:25:14,11:14:554:11:437:-32.1563,0,-42.6747 0/1:14:8,6:8:324:6:245:-18.2151,0,-25.3148 1/1:4:0,4:0:0:4:163:-15.0584,-1.20412,0 0/0:11:11,0:11:438:0:0:0,-3.31133,-39.7735 dDocent_Contig_7890 19 . A T 431.349 . AB=0.215686;ABP=74.6263;AC=4;AF=0.333333;AN=12;AO=23;CIGAR=1X;DP=147;DPB=147;DPRA=1.27;EPP=52.9542;EPPR=272.273;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.652174;PAIREDR=0.685484;PAO=0;PQA=0;PQR=0;PRO=0;QA=910;QR=4927;RO=124;RPL=0;RPP=52.9542;RPPR=272.273;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=124;SRP=272.273;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:13,13:13:527:13:511:-38.5066,0,-39.9495 0/1:35:32,3:32:1286:3:122:-0.836443,0,-105.467 0/1:22:19,3:19:742:3:123:-4.84213,0,-60.472 0/1:19:16,3:16:631:3:115:-5.00281,0,-51.4031 0/0:20:20,0:20:782:0:0:0,-6.0206,-70.6957 0/0:25:24,1:24:959:1:39:0,-3.62919,-82.7133 dDocent_Contig_7891 46 . A G 2245.26 . AB=0.141844;ABP=160.111;AC=0;AF=0;AN=10;AO=20;CIGAR=2X;DP=294;DPB=294;DPRA=1.56667;EPP=46.4397;EPPR=409.076;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=5;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=791;QR=7470;RO=187;RPL=0;RPP=46.4397;RPPR=409.076;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=187;SRP=409.076;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:45:42,0,3:42:1679:0,3:0,120:0,-12.6433,-150.941,-2.35866,-141.055,-140.152 0|0:66:43,2,21:43:1723:2,21:81,843:-56.5141,-62.779,-204.121,0,-135.261,-135.619 0|0:51:41,0,10:41:1626:0,10:0,377:-18.9207,-31.2629,-165.119,0,-134.237,-131.226 0|0:75:27,18,30:27:1091:18,30:710,1204:-91.0796,-40.7935,-125.321,0,-31.5383,-80.92 .:.:.:.:.:.:.:. 0|0:57:34,0,23:34:1351:0,23:0,913:-65.3128,-75.5478,-186.763,0,-111.612,-104.688 dDocent_Contig_7892 106 . N A 94.9002 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=8;CIGAR=2X;DP=8;DPB=94.5;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=12.25;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=152;PQA=3975;PQR=0;PRO=0;QA=271;QR=0;RO=0;RPL=0;RPP=20.3821;RPPR=0;RPR=8;RUN=1;SAF=0;SAP=20.3821;SAR=8;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:1:0,1:0:0:1:34:-0.626782,-0.30103,0 1|1:3:0,3:0:0:3:101:-4.36311,-0.90309,0 .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:68:-2.49766,-0.60206,0 1|1:1:0,1:0:0:1:34:-0.626587,-0.30103,0 1|1:1:0,1:0:0:1:34:-0.617295,-0.30103,0 dDocent_Contig_7893 7 . T C 906.536 . AB=0.137006;ABP=813.313;AC=4;AF=0.333333;AN=12;AO=112;CIGAR=1X;DP=1005;DPB=1005;DPRA=0;EPP=246.215;EPPR=1942.14;GTI=0;LEN=1;MEANALT=1;MQM=43.1071;MQMR=59.9776;NS=6;NUMALT=1;ODDS=0;PAIRED=0.508929;PAIREDR=0.976484;PAO=0;PQA=0;PQR=0;PRO=0;QA=4294;QR=34070;RO=893;RPL=0;RPP=246.215;RPPR=1942.14;RPR=112;RUN=1;SAF=112;SAP=246.215;SAR=0;SRF=893;SRP=1942.14;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:77:73,4:73:2753:4:156:0,-8.76202,-233.534 0/1:97:82,15:82:3152:15:580:-16.9705,0,-254.408 0/1:96:77,19:77:2917:19:731:-29.8107,0,-233.805 0/1:146:125,21:125:4746:21:809:-27.5491,0,-383.24 0/0:220:209,11:209:8003:11:428:0,-33.3442,-687.187 0/1:369:327,42:327:12499:42:1590:-23.5451,0,-1013.31 dDocent_Contig_7894 58 . C G 65.4142 . AB=0.146341;ABP=47.552;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=95;DPB=95;DPRA=1.51852;EPP=16.0391;EPPR=187.683;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.5393;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.955056;PAO=0;PQA=0;PQR=0;PRO=0;QA=237;QR=3546;RO=89;RPL=6;RPP=16.0391;RPPR=196.271;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=88;SRP=187.683;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:398:0:0:0,-3.0103,-36.178 0/1:14:12,2:12:473:2:82:-3.56526,0,-38.7056 0/0:18:18,0:18:725:0:0:0,-5.41854,-65.5755 0/0:12:12,0:12:482:0:0:0,-3.61236,-43.7316 0/0:14:14,0:14:563:0:0:0,-4.21442,-50.9783 0/1:27:23,4:23:905:4:155:-6.19604,0,-72.4314 dDocent_Contig_7895 21 . T A 236.385 . AB=0.181818;ABP=70.7208;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=171;DPB=171;DPRA=1.6383;EPP=33.4109;EPPR=341.76;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=549;QR=5998;RO=156;RPL=0;RPP=33.4109;RPPR=341.76;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=156;SRP=341.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1048:0:0:0,-8.42884,-94.6111 0/0:33:33,0:33:1265:0:0:0,-9.93399,-114.13 0/1:22:19,3:19:729:3:120:-4.56465,0,-59.314 0/1:55:43,11:43:1677:11:429:-22.2955,0,-134.51 0/0:11:11,0:11:425:0:0:0,-3.31133,-38.6015 0/0:22:22,0:22:854:0:0:0,-6.62266,-77.1786 dDocent_Contig_7896 115 . T C 2276.91 . AB=0.361702;ABP=49.8587;AC=6;AF=0.5;AN=12;AO=102;CIGAR=1X;DP=282;DPB=282;DPRA=0;EPP=224.5;EPPR=393.875;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.843137;PAIREDR=0.944444;PAO=0;PQA=0;PQR=0;PRO=0;QA=3576;QR=6249;RO=180;RPL=0;RPP=224.5;RPPR=393.875;RPR=102;RUN=1;SAF=0;SAP=224.5;SAR=102;SRF=0;SRP=393.875;SRR=180;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:39:21,18:21:744:18:625:-44.8341,0,-55.5444 0/1:68:35,33:35:1221:33:1171:-85.2282,0,-89.7211 0/1:52:35,17:35:1239:17:608:-39.3985,0,-96.1613 0/1:47:31,16:31:1063:16:532:-34.0452,0,-81.8234 0/1:40:31,9:31:1055:9:319:-17.0104,0,-83.2091 0/1:36:27,9:27:927:9:321:-18.3963,0,-72.9014 dDocent_Contig_7897 36 . T C 716.953 . AB=0.318681;ABP=28.9964;AC=3;AF=0.25;AN=12;AO=38;CIGAR=1X2M1X;DP=271;DPB=271;DPRA=0;EPP=85.5263;EPPR=506.792;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.973684;PAIREDR=0.818966;PAO=0;PQA=0;PQR=0;PRO=0;QA=1499;QR=9099;RO=232;RPL=0;RPP=85.5263;RPPR=506.792;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=232;SRP=506.792;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:67:64,3:64:2504:3:121:0,-8.88881,-214.241 0|1:24:11,13:11:438:13:509:-38.9314,0,-32.5493 0|1:34:28,6:28:1093:6:241:-11.8317,0,-88.4216 0|0:53:51,1:51:2006:1:41:0,-11.8687,-176.747 0|1:33:23,10:23:905:10:397:-26.154,0,-71.8238 0|0:60:55,5:55:2153:5:190:0,-0.596704,-176.498 dDocent_Contig_7898 31 . A G 135.084 . AB=0.171875;ABP=62.8615;AC=3;AF=0.25;AN=12;AO=11;CIGAR=1X;DP=206;DPB=206;DPRA=0.450704;EPP=26.8965;EPPR=426.447;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.989744;PAO=0;PQA=0;PQR=0;PRO=0;QA=410;QR=7362;RO=195;RPL=0;RPP=26.8965;RPPR=426.447;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=195;SRP=426.447;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:10,2:10:384:2:75:-3.50798,0,-31.2987 0/0:41:41,0:41:1539:0:0:0,-12.3422,-138.773 0/1:19:15,4:15:583:4:151:-8.23778,0,-47.0902 0/1:33:28,5:28:1044:5:184:-6.98226,0,-84.3308 0/0:49:49,0:49:1859:0:0:0,-14.7505,-167.542 0/0:52:52,0:52:1953:0:0:0,-15.6536,-176.004 dDocent_Contig_7899 34 . A G 2198.09 . AB=0.411168;ABP=16.5131;AC=6;AF=0.5;AN=12;AO=81;CIGAR=1X;DP=197;DPB=197;DPRA=0;EPP=178.9;EPPR=254.901;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3203;QR=4661;RO=116;RPL=0;RPP=178.9;RPPR=254.901;RPR=81;RUN=1;SAF=81;SAP=178.9;SAR=0;SRF=116;SRP=254.901;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:15,18:15:609:18:702:-53.5656,0,-45.2138 0/1:33:24,9:24:961:9:366:-23.3712,0,-76.8567 0/1:53:26,27:26:1037:27:1066:-80.2722,0,-77.6675 0/1:51:35,16:35:1414:16:623:-41.0445,0,-112.158 0/1:14:5,9:5:203:9:364:-28.9103,0,-14.4386 0/1:13:11,2:11:437:2:82:-3.86629,0,-35.7712 dDocent_Contig_7900 8 . C T 454.974 . AB=0.222222;ABP=69.3608;AC=1;AF=0.0833333;AN=12;AO=22;CIGAR=1X;DP=926;DPB=926;DPRA=0.598549;EPP=50.7827;EPPR=1963.85;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=58.7065;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.991141;PAO=0;PQA=0;PQR=0;PRO=0;QA=850;QR=34828;RO=903;RPL=0;RPP=50.7827;RPPR=1963.85;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=903;SRP=1963.85;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:138:138,0:138:5294:0:0:0,-41.5421,-475.907 0/0:249:248,0:248:9573:0:0:0,-74.6554,-858.827 0/0:138:138,0:138:5334:0:0:0,-41.5421,-479.62 0/0:204:204,0:204:7851:0:0:0,-61.4101,-705.617 0/1:99:77,22:77:2987:22:850:-47.0203,0,-239.182 0/0:98:98,0:98:3789:0:0:0,-29.5009,-337.49 dDocent_Contig_7901 22 . T C 2019.28 . AB=0.357143;ABP=42.7172;AC=6;AF=0.5;AN=12;AO=80;CIGAR=1X;DP=224;DPB=224;DPRA=0;EPP=176.728;EPPR=315.702;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3095;QR=5628;RO=144;RPL=0;RPP=176.728;RPPR=315.702;RPR=80;RUN=1;SAF=80;SAP=176.728;SAR=0;SRF=144;SRP=315.702;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:43:34,9:34:1335:9:356:-19.4579,0,-107.482 0/1:39:24,15:24:948:15:574:-40.257,0,-73.8896 0/1:40:30,10:30:1190:10:393:-23.6854,0,-95.3412 0/1:59:39,20:39:1513:20:753:-50.3138,0,-118.663 0/1:23:5,18:5:199:18:718:-58.0216,0,-11.3647 0/1:20:12,8:12:443:8:301:-21.4144,0,-34.1868 dDocent_Contig_7902 25 . G A 259.214 . AB=0.218182;ABP=40.9518;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=190;DPB=190;DPRA=1.76238;EPP=33.4109;EPPR=385.189;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.142857;PAIREDR=0.505682;PAO=0;PQA=0;PQR=0;PRO=0;QA=561;QR=6974;RO=176;RPL=0;RPP=33.4109;RPPR=385.189;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=176;SRP=385.189;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:31,0:31:1250:0:0:0,-9.33193,-112.768 0/0:28:28,0:28:1094:0:0:0,-8.42884,-98.7439 0/0:9:9,0:9:356:0:0:0,-2.70927,-32.3985 0/0:33:33,0:33:1312:0:0:0,-9.93399,-118.342 0/0:34:32,2:32:1253:2:76:0,-3.02148,-105.827 0/1:55:43,12:43:1709:12:485:-27.4443,0,-137.472 dDocent_Contig_7903 17 . G A 3928.36 . AB=0.277487;ABP=249.433;AC=6;AF=0.5;AN=12;AO=159;CIGAR=4M2I5M1X1M;DP=573;DPB=613;DPRA=0;EPP=348.274;EPPR=728.282;GTI=0;LEN=1;MEANALT=6.16667;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=0.283019;PAIREDR=0.991018;PAO=0;PQA=0;PQR=0;PRO=0;QA=6144;QR=13028;RO=334;RPL=0;RPP=348.274;RPPR=728.282;RPR=159;RUN=1;SAF=159;SAP=348.274;SAR=0;SRF=334;SRP=728.282;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:85:47,4,6,1,0,25:47:1833:4,6,1,0,25:152,231,40,0,936:-62.4773,-64.162,-213.633,-57.6596,-195.872,-206.529,-73.33,-211.542,-205.04,-223.704,-76.6257,-214.837,-208.336,-224.005,-227.301,0,-138.207,-131.706,-147.375,-150.67,-143.144 0|1:71:52,0,1,1,1,14:52:2023:0,1,1,1,14:0,40,40,25,560:-30.4994,-46.1529,-212.401,-42.8574,-209.106,-208.805,-42.8574,-209.106,-205.811,-208.805,-44.2119,-210.455,-207.159,-207.159,-210.154,0,-166.269,-162.974,-162.974,-164.323,-162.055 0|1:59:19,1,6,3,0,25:19:747:1,6,3,0,25:38,219,116,0,967:-73.7232,-76.3261,-137.476,-61.5568,-119.891,-121.202,-69.9137,-128.249,-113.48,-130.462,-79.4428,-137.777,-123.008,-131.365,-140.894,0,-58.3514,-43.5826,-51.9389,-61.4681,-53.9423 0|1:111:70,4,4,0,6,19:70:2728:4,4,0,6,19:158,155,0,223,719:-37.8592,-45.9283,-268.949,-46.1979,-257.42,-269.218,-58.9313,-270.153,-270.422,-283.155,-40.684,-251.905,-252.174,-264.907,-263.101,0,-211.219,-211.488,-224.221,-205.973,-218.501 0|1:111:67,6,0,1,0,35:67:2606:6,0,1,0,35:223,0,37,0,1363:-91.854,-93.7831,-306.132,-112.023,-307.938,-326.179,-108.996,-304.911,-323.152,-322.851,-112.023,-307.938,-326.179,-323.152,-326.179,0,-195.926,-214.166,-211.14,-214.166,-203.63 0|1:136:79,14,0,0,0,41:79:3091:14,0,0,0,41:551,0,0,0,1599:-107.645,-86.0978,-336.032,-131.426,-340.247,-385.574,-131.426,-340.247,-385.574,-385.574,-131.426,-340.247,-385.574,-385.574,-385.574,0,-208.822,-254.149,-254.149,-254.149,-241.807 dDocent_Contig_7904 6 . T C 15532.2 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=1329;CIGAR=1X4M;DP=1960;DPB=1960;DPRA=0;EPP=2888.9;EPPR=0;GTI=0;LEN=1;MEANALT=9.33333;MQM=16.1663;MQMR=0;NS=6;NUMALT=6;ODDS=0;PAIRED=0.96915;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=20585;QR=0;RO=0;RPL=0;RPP=2888.9;RPPR=0;RPR=1329;RUN=1;SAF=1329;SAP=2888.9;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:250:0,48,1,14,0,0,177:0:0:48,1,14,0,0,177:780,7,535,0,0,2556:-189.223,-144.338,-129.888,-189.125,-144.239,-188.824,-148.102,-103.213,-148.003,-143.887,-189.223,-144.338,-189.125,-148.102,-189.223,-189.223,-144.338,-189.125,-148.102,-189.223,-189.223,-53.2823,-8.49298,-53.1852,-12.133,-53.2823,-53.2823,0 1|1:272:0,46,6,2,0,0,207:0:0:46,6,2,0,0,207:510,42,78,0,0,2764:-203.098,-183.606,-169.759,-202.504,-183.013,-200.698,-197.135,-177.643,-196.541,-196.533,-203.098,-183.606,-202.504,-197.135,-203.098,-203.098,-183.606,-202.504,-197.135,-203.098,-203.098,-62.3132,-42.8492,-61.7235,-56.3437,-62.3132,-62.3132,0 1|1:262:0,34,2,0,8,4,208:0:0:34,2,0,8,4,208:363,14,0,301,60,3511:-271.347,-256.622,-246.387,-271.149,-256.424,-270.547,-271.347,-256.622,-271.149,-271.347,-268.719,-253.995,-268.522,-268.719,-266.311,-268.069,-253.344,-267.872,-268.069,-265.442,-266.865,-62.6142,-47.8764,-62.4173,-62.6142,-59.9863,-59.3327,0 1|1:394:0,68,4,5,1,1,302:0:0:68,4,5,1,1,302:793,28,195,39,7,4224:-309.87,-284.998,-264.527,-309.475,-284.602,-308.27,-297.617,-272.744,-297.221,-296.112,-306.889,-282.016,-306.493,-294.636,-306.588,-309.771,-284.899,-309.376,-297.518,-306.79,-309.47,-90.9111,-66.1457,-90.5178,-78.6494,-87.9278,-90.8127,0 1|1:306:0,53,0,0,33,7,193:0:0:53,0,0,33,7,193:426,0,0,1278,81,3217:-245.077,-237.573,-221.618,-245.077,-237.573,-245.077,-245.077,-237.573,-245.077,-245.077,-234.234,-226.733,-234.234,-234.234,-224.3,-241.503,-233.999,-241.503,-241.503,-230.66,-239.395,-58.0988,-50.6032,-58.0988,-58.0988,-47.252,-54.5226,0 1|1:476:0,61,88,0,16,56,242:0:0:61,88,0,16,56,242:555,648,0,618,392,4313:-333.826,-324.218,-305.855,-322.236,-312.632,-295.745,-333.826,-324.218,-322.236,-333.826,-328.568,-318.96,-316.978,-328.568,-323.751,-328.284,-318.678,-316.698,-328.284,-323.026,-311.426,-72.8493,-63.2359,-61.2527,-72.8493,-67.5887,-67.3035,0 dDocent_Contig_7905 25 . G T 165.942 . AB=0.545455;ABP=3.20771;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=172;DPB=172;DPRA=0.341615;EPP=16.0391;EPPR=363.475;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.975904;PAO=0;PQA=0;PQR=0;PRO=0;QA=234;QR=6595;RO=166;RPL=0;RPP=16.0391;RPPR=363.475;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=166;SRP=363.475;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:941:0:0:0,-7.22472,-84.9898 0/0:37:37,0:37:1450:0:0:0,-11.1381,-130.747 0/0:17:17,0:17:680:0:0:0,-5.11751,-61.5299 0/0:62:62,0:62:2481:0:0:0,-18.6639,-223.439 0/0:21:21,0:21:844:0:0:0,-6.32163,-76.2713 0/1:11:5,6:5:199:6:234:-18.1171,0,-14.9772 dDocent_Contig_7906 17 . T C 4961.15 . AB=0.390728;ABP=49.9918;AC=6;AF=0.5;AN=12;AO=177;CIGAR=1X;DP=453;DPB=453;DPRA=0;EPP=387.361;EPPR=602.337;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.661017;PAIREDR=0.688406;PAO=0;PQA=0;PQR=0;PRO=0;QA=7134;QR=11010;RO=276;RPL=0;RPP=387.361;RPPR=602.337;RPR=177;RUN=1;SAF=177;SAP=387.361;SAR=0;SRF=276;SRP=602.337;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:62:40,22:40:1611:22:883:-61.1119,0,-126.552 0/1:76:39,37:39:1569:37:1490:-111.461,0,-118.566 0/1:25:18,7:18:723:7:285:-18.4987,0,-57.8694 0/1:116:82,34:82:3233:34:1376:-89.1753,0,-256.116 0/1:72:39,33:39:1582:33:1325:-97.8346,0,-120.936 0/1:102:58,44:58:2292:44:1775:-129.256,0,-175.73 dDocent_Contig_7907 30 . G A 3760.13 . AB=0.391667;ABP=15.2429;AC=3;AF=0.25;AN=12;AO=97;CIGAR=5M1X2M;DP=286;DPB=260.5;DPRA=0;EPP=213.643;EPPR=337.417;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3805;QR=6079;RO=154;RPL=0;RPP=213.643;RPPR=337.417;RPR=97;RUN=1;SAF=97;SAP=213.643;SAR=0;SRF=154;SRP=337.417;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:30:21,9,0:21:831:9,0:309,0:-19.1003,0,-66.079,-25.4219,-68.7883,-93.8514 0|0:27:19,8,0:19:747:8,0:288,0:-18.135,0,-59.4291,-23.8545,-61.8373,-85.3223 0|0:13:11,2,0:11:439:2,0:76,0:-3.30142,0,-35.9531,-6.61275,-36.5552,-42.7853 0|0:46:31,15,0:31:1230:15,0:573,0:-38.0582,0,-97.1341,-47.3901,-101.65,-148.653 0|1:120:72,0,47:72:2832:0,47:0,1819:-127.697,-149.371,-382.328,0,-232.937,-218.789 1|1:50:0,0,50:0:0:0,50:0,1986:-178.939,-178.939,-178.939,-15.0515,-15.0515,0 dDocent_Contig_7908 31 . C A 318.162 . AB=0.157895;ABP=41.6397;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X2M1X;DP=425;DPB=424.75;DPRA=1.27545;EPP=31.2394;EPPR=821.856;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.989717;PAO=0;PQA=0;PQR=0;PRO=0;QA=524;QR=15316;RO=389;RPL=0;RPP=31.2394;RPPR=847.713;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=386;SRP=821.856;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:38:29,6,3:29:1138:6,3:242,123:-11.2142,0,-91.7651,-9.78965,-83.4174,-102.465 0|0:104:97,7,0:97:3786:7,0:282,0:0,-5.55395,-315.025,-29.1999,-317.132,-340.377 0|0:52:49,0,3:49:1962:0,3:0,122:0,-14.7505,-176.378,-4.28107,-166.315,-165.411 0|0:116:100,0,16:100:3926:0,16:0,649:-23.8238,-53.9268,-376.796,0,-323.273,-318.456 0|0:49:49,0,0:49:1938:0,0:0,0:0,-14.7505,-174.631,-14.7505,-174.631,-174.631 0|0:66:65,0,0:65:2566:0,0:0,0:0,-19.5669,-230.723,-19.5669,-230.723,-230.723 dDocent_Contig_7910 18 . G A 3790.19 . AB=0.0273224;ABP=713.283;AC=3;AF=0.25;AN=12;AO=12;CIGAR=1X2M2X;DP=603;DPB=603;DPRA=1.87402;EPP=29.068;EPPR=971.487;GTI=0;LEN=1;MEANALT=2.5;MQM=48;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.840807;PAO=0;PQA=0;PQR=0;PRO=0;QA=455;QR=17098;RO=446;RPL=0;RPP=29.068;RPPR=971.487;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=446;SRP=971.487;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:53:53,0,0:53:2040:0,0:0,0:0,-15.9546,-183.827,-15.9546,-183.827,-183.827 0|0:74:73,0,0:73:2789:0,0:0,0:0,-21.9752,-251.08,-21.9752,-251.08,-251.08 0|1:63:53,5,1:53:2053:5,1:202,40:-0.759324,0,-167.239,-13.4668,-165.502,-181.857 0|0:110:108,0,2:108:4101:0,2:0,74:0,-32.5112,-368.802,-26.1601,-362.818,-362.215 0|1:119:54,57,8:54:2073:57,8:2221,303:-166.288,0,-153.003,-157.986,-145.604,-325.729 0|1:184:105,77,1:105:4042:77,1:3010,38:-215.949,0,-308.82,-244.475,-328.918,-576.033 dDocent_Contig_7911 13 . A T 105.185 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=16;CIGAR=1X;DP=16;DPB=16;DPRA=0;EPP=37.7539;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=7;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=642;QR=0;RO=0;RPL=0;RPP=37.7539;RPPR=0;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:10:0,10:0:0:10:398:-6.36821,-3.0103,0 1/1:6:0,6:0:0:6:244:-3.84917,-1.80618,0 dDocent_Contig_7912 15 . G T 606.861 . AB=0.184358;ABP=157.913;AC=3;AF=0.25;AN=12;AO=37;CIGAR=1X;DP=291;DPB=291;DPRA=1.33158;EPP=83.3548;EPPR=554.564;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.837838;PAIREDR=0.866142;PAO=0;PQA=0;PQR=0;PRO=0;QA=1474;QR=10161;RO=254;RPL=0;RPP=83.3548;RPPR=554.564;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=254;SRP=554.564;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:43:39,4:39:1574:4:159:-1.74715,0,-128.95 0/1:56:45,11:45:1799:11:439:-23.0067,0,-145.267 0/0:29:28,1:28:1118:1:41:0,-4.6353,-96.8052 0/1:80:62,18:62:2497:18:718:-40.8625,0,-200.78 0/0:45:42,3:42:1669:3:117:0,-2.63706,-139.528 0/0:38:38,0:38:1504:0:0:0,-11.4391,-135.602 dDocent_Contig_7913 52 . T G 434.064 . AB=0.190083;ABP=103.957;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1X;DP=213;DPB=213;DPRA=2.63043;EPP=52.9542;EPPR=415.59;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=915;QR=7498;RO=190;RPL=23;RPP=52.9542;RPPR=415.59;RPR=0;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=190;SRP=415.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:589:0:0:0,-4.51545,-53.3449 0/0:31:31,0:31:1231:0:0:0,-9.33193,-111.063 0/1:51:42,9:42:1683:9:363:-17.6818,0,-136.345 0/1:70:56,14:56:2197:14:552:-28.9465,0,-176.844 0/0:8:8,0:8:316:0:0:0,-2.40824,-28.8042 0/0:38:38,0:38:1482:0:0:0,-11.4391,-133.619 dDocent_Contig_7914 28 . C A 60.3583 . AB=0.166667;ABP=26.1727;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=111;DPB=111;DPRA=1.26471;EPP=13.8677;EPPR=233.186;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=169;QR=4213;RO=106;RPL=0;RPP=13.8677;RPPR=233.186;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=106;SRP=233.186;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:589:0:0:0,-4.51545,-53.3437 0/0:32:32,0:32:1273:0:0:0,-9.63296,-114.832 0/0:14:14,0:14:546:0:0:0,-4.21442,-49.4707 0/0:7:7,0:7:279:0:0:0,-2.10721,-25.4788 0/0:19:18,1:18:716:1:9:0,-4.81957,-63.8631 0/1:24:20,4:20:810:4:160:-7.55871,0,-65.9904 dDocent_Contig_7915 30 . A G 5639.35 . AB=0.520661;ABP=4.35625;AC=6;AF=0.5;AN=12;AO=189;CIGAR=1X7M;DP=363;DPB=361.75;DPRA=0;EPP=413.419;EPPR=359.132;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.925926;PAIREDR=0.981707;PAO=0;PQA=0;PQR=0;PRO=0;QA=7558;QR=6458;RO=164;RPL=0;RPP=413.419;RPPR=359.132;RPR=189;RUN=1;SAF=189;SAP=413.419;SAR=0;SRF=164;SRP=359.132;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:70:24,10,36:24:946:10,36:391,1450:-112.29,-87.3721,-162.189,0,-45.6893,-66.996 0|1:76:30,0,46:30:1183:0,46:0,1829:-141.935,-150.966,-248.297,0,-97.7265,-83.8791 0|1:55:26,0,29:26:1007:0,29:0,1162:-88.3025,-96.1292,-178.834,0,-83.0981,-74.3683 0|1:67:21,0,46:21:835:0,46:0,1840:-145.628,-151.95,-220.699,0,-69.1473,-55.2999 0|1:46:32,0,14:32:1260:0,14:0,562:-37.0755,-46.7085,-150.357,0,-104.048,-99.8332 0|1:49:31,0,18:31:1227:0,18:0,715:-49.9258,-59.2578,-160.243,0,-101.381,-95.9627 dDocent_Contig_7916 9 . T A 75.3714 . AB=0.0918836;ABP=947.714;AC=1;AF=0.0833333;AN=12;AO=151;CIGAR=1X;DP=4020;DPB=4020;DPRA=0;EPP=330.903;EPPR=8404.44;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.966887;PAIREDR=0.983975;PAO=0;PQA=0;PQR=0;PRO=0;QA=5730;QR=147701;RO=3869;RPL=0;RPP=330.903;RPPR=8404.44;RPR=151;RUN=1;SAF=151;SAP=330.903;SAR=0;SRF=3869;SRP=8404.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:653:593,60:593:22606:60:2279:-8.75899,0,-1836.73 0/0:759:730,29:730:27936:29:1113:0,-128.008,-2412.13 0/0:465:430,35:430:16380:35:1336:0,-19.452,-1352.88 0/0:679:655,24:655:24965:24:914:0,-121.823,-2162.87 0/0:694:692,2:692:26457:2:77:0,-201.606,-2372.3 0/0:770:769,1:769:29357:1:11:0,-230.693,-2639.29 dDocent_Contig_7917 12 . T C 112.915 . AB=0.25;ABP=13.8677;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=179;DPB=179;DPRA=0.628931;EPP=13.8677;EPPR=380.846;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994253;PAO=0;PQA=0;PQR=0;PRO=0;QA=205;QR=7003;RO=174;RPL=0;RPP=13.8677;RPPR=380.846;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=174;SRP=380.846;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:50,0:50:2005:0:0:0,-15.0515,-180.639 0/0:38:38,0:38:1543:0:0:0,-11.4391,-139.104 0/0:16:16,0:16:648:0:0:0,-4.81648,-58.6526 0/0:28:28,0:28:1141:0:0:0,-8.42884,-102.967 0/0:27:27,0:27:1078:0:0:0,-8.12781,-97.3063 0/1:20:15,5:15:588:5:205:-12.8144,0,-47.2308 dDocent_Contig_7918 16 . C A 7305.77 . AB=0.634921;ABP=62.7775;AC=6;AF=0.5;AN=12;AO=240;CIGAR=1X;DP=378;DPB=378;DPRA=0;EPP=524.164;EPPR=302.673;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9481;QR=5520;RO=138;RPL=0;RPP=524.164;RPPR=302.673;RPR=240;RUN=1;SAF=240;SAP=524.164;SAR=0;SRF=138;SRP=302.673;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:43:22,21:22:871:21:843:-63.2396,0,-65.7467 0/1:89:28,61:28:1133:61:2367:-186.395,0,-75.4587 0/1:31:16,15:16:618:15:591:-44.1943,0,-46.6058 0/1:63:42,21:42:1693:21:831:-56.1403,0,-133.62 0/1:106:9,97:9:363:97:3841:-313.777,0,-1.1251 0/1:46:21,25:21:842:25:1008:-77.1677,0,-62.245 dDocent_Contig_7919 107 . N A 663.667 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=23;CIGAR=1X;DP=23;DPB=23;DPRA=0;EPP=52.9542;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=719;QR=0;RO=0;RPL=0;RPP=52.9542;RPPR=0;RPR=23;RUN=1;SAF=0;SAP=52.9542;SAR=23;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:8:-0.799998,-0.30103,0 1/1:5:0,5:0:0:5:149:-13.7041,-1.50515,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:16:0,16:0:0:16:527:-47.744,-4.81648,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_7920 30 . G C 93.2533 . AB=0.136364;ABP=53.5464;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=13M1X4M;DP=93;DPB=90.3333;DPRA=1.79592;EPP=16.0391;EPPR=181.071;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.95122;PAO=0;PQA=0;PQR=0;PRO=0;QA=240;QR=3199;RO=82;RPL=0;RPP=16.0391;RPPR=181.071;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=82;SRP=181.071;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:13:13,0,0:13:513:0,0:0,0:0,-3.91339,-46.5189,-3.91339,-46.5189,-46.5189 0|0:19:19,0,0:19:746:0,0:0,0:0,-5.71957,-67.4667,-5.71957,-67.4667,-67.4667 0|0:22:17,3,2:17:658:3,2:116,81:-4.39986,0,-53.1267,-2.83094,-47.3488,-56.2749 0|0:9:8,0,0:8:315:0,0:0,0:0,-2.40824,-28.3081,-2.40824,-28.3081,-28.3081 0|0:8:8,0,0:8:311:0,0:0,0:0,-2.40824,-28.3524,-2.40824,-28.3524,-28.3524 0|1:22:17,0,4:17:656:0,4:0,159:-8.14691,-13.2644,-67.1559,0,-54.0609,-52.8568 dDocent_Contig_7921 145 . C A 85.3514 . AB=0.208333;ABP=20.744;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=118;DPB=118;DPRA=1.2766;EPP=13.8677;EPPR=248.387;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=188;QR=4228;RO=113;RPL=0;RPP=13.8677;RPPR=248.387;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=248.387;SRR=113;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:671:0:0:0,-5.41854,-60.7198 0/0:24:24,0:24:914:0:0:0,-7.22472,-82.577 0/1:24:19,5:19:731:5:188:-10.058,0,-58.8961 0/0:38:38,0:38:1411:0:0:0,-11.4391,-127.265 0/0:7:7,0:7:238:0:0:0,-2.10721,-21.7427 0/0:7:7,0:7:263:0:0:0,-2.10721,-24.0266 dDocent_Contig_7923 16 . C A 488.564 . AB=0.19697;ABP=108.294;AC=3;AF=0.3;AN=10;AO=28;CIGAR=1X;DP=176;DPB=176;DPRA=3.13462;EPP=63.8115;EPPR=322.217;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1111;QR=5758;RO=147;RPL=0;RPP=63.8115;RPPR=322.217;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=147;SRP=322.217;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:19,6:19:761:6:239:-14.3594,0,-61.2875 0/0:31:29,2:29:1144:2:79:0,-1.8343,-95.7454 0/1:53:44,8:44:1748:8:320:-13.1322,0,-141.508 0/1:54:42,12:42:1592:12:473:-26.6658,0,-127.253 ./.:.:.:.:.:.:.:. 0/0:13:13,0:13:513:0:0:0,-3.91339,-46.5133 dDocent_Contig_7924 82 . T A 1549 . AB=0.229462;ABP=227.422;AC=4;AF=0.333333;AN=12;AO=87;CIGAR=1X;DP=476;DPB=476;DPRA=0;EPP=191.928;EPPR=845.542;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.448276;PAIREDR=0.585052;PAO=0;PQA=0;PQR=0;PRO=0;QA=3197;QR=14451;RO=388;RPL=59;RPP=26.9963;RPPR=40.6417;RPR=28;RUN=1;SAF=59;SAP=26.9963;SAR=28;SRF=235;SRP=40.6417;SRR=153;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:84:79,5:79:2984:5:190:0,-7.81965,-251.258 0/1:117:101,16:101:3729:16:595:-18.6638,0,-300.519 0/0:39:38,1:38:1454:1:41:0,-7.6456,-127.029 0/1:73:52,21:52:1956:21:773:-47.9124,0,-154.306 0/1:81:59,21:59:2161:21:763:-44.7641,0,-170.495 0/1:82:59,23:59:2167:23:835:-50.7815,0,-170.57 dDocent_Contig_7925 21 . T C 769.215 . AB=0.329897;ABP=27.389;AC=6;AF=0.5;AN=12;AO=32;CIGAR=1X;DP=97;DPB=97;DPRA=0;EPP=42.0968;EPPR=144.156;GTI=0;LEN=1;MEANALT=1;MQM=57.75;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.46875;PAIREDR=0.969231;PAO=0;PQA=0;PQR=0;PRO=0;QA=1287;QR=2560;RO=65;RPL=0;RPP=72.4974;RPPR=144.156;RPR=32;RUN=1;SAF=28;SAP=42.0968;SAR=4;SRF=65;SRP=144.156;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:8,13:8:319:13:523:-40.7183,0,-22.7543 0/1:9:4,5:4:144:5:202:-15.8526,0,-10.6013 0/1:11:9,2:9:361:2:81:-4.1767,0,-29.5429 0/1:10:8,2:8:303:2:81:-4.67543,0,-24.6127 0/1:27:22,5:22:879:5:199:-10.1602,0,-71.2874 0/1:19:14,5:14:554:5:201:-12.5595,0,-44.4832 dDocent_Contig_7926 96 . T A 431.729 . AB=0.3;ABP=30.8051;AC=4;AF=0.333333;AN=12;AO=26;CIGAR=1X;DP=121;DPB=121;DPRA=0;EPP=59.4686;EPPR=209.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=876;QR=3305;RO=95;RPL=26;RPP=59.4686;RPPR=209.3;RPR=0;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=95;SRP=209.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:22,1:22:760:1:35:0,-3.42506,-65.2212 0/0:18:17,1:17:595:1:35:0,-1.91991,-50.3803 0/1:38:28,10:28:978:10:335:-19.0357,0,-76.8958 0/1:7:6,1:6:211:1:35:-1.39142,0,-17.2266 0/1:23:13,10:13:447:10:344:-24.3692,0,-33.6354 0/1:12:9,3:9:314:3:92:-4.97226,0,-24.9855 dDocent_Contig_7927 28 . T A 18976.6 . AB=0.659607;ABP=149.268;AC=9;AF=0.75;AN=12;AO=560;CIGAR=1X2M;DP=801;DPB=801;DPRA=0;EPP=1219.03;EPPR=257.073;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.991071;PAIREDR=0.974359;PAO=0;PQA=0;PQR=0;PRO=0;QA=22345;QR=4655;RO=117;RPL=0;RPP=1219.03;RPPR=257.073;RPR=560;RUN=1;SAF=560;SAP=1219.03;SAR=0;SRF=117;SRP=257.073;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:140:8,8,124:8:315:8,124:320,4995:-420.7,-396.749,-420.254,-11.4172,-10.9647,0 1|1:138:9,17,110:9:359:17,110:677,4390:-385.018,-331.98,-356.428,-26.19,0,-22.6458 0|1:135:16,17,102:16:645:17,102:646,4035:-327.226,-279.077,-327.126,0,-0.221061,-22.4718 1|1:105:3,23,78:3:121:23,78:903,3118:-320.195,-246.837,-249.888,-64.279,0,-50.7741 0|1:142:37,33,72:37:1462:33,72:1308,2870:-225.193,-128.669,-239.035,0,-12.6368,-98.6259 0|1:141:44,23,74:44:1753:23,74:905,2937:-228.512,-167.32,-304.749,0,-69.9194,-122.079 dDocent_Contig_7929 12 . C T 284.949 . AB=0.192308;ABP=67.1523;AC=4;AF=0.333333;AN=12;AO=18;CIGAR=1X4M;DP=202;DPB=202;DPRA=0.921053;EPP=42.0968;EPPR=374.332;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.722222;PAIREDR=0.760234;PAO=0;PQA=0;PQR=0;PRO=0;QA=714;QR=6736;RO=171;RPL=0;RPP=42.0968;RPPR=374.332;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=171;SRP=374.332;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:38:30,4,4:30:1179:4,4:147,157:-3.89324,-0.921027,-96.6902,0,-84.9827,-95.7912 0|0:62:55,4,3:55:2168:4,3:161,121:0,-3.2878,-180.44,-6.58205,-171.67,-184.036 0|1:15:9,0,6:9:359:0,6:0,239:-17.3684,-20.0777,-49.644,0,-29.9644,-28.1582 0|1:25:19,1,5:19:745:1,5:40,197:-10.4816,-12.9051,-73.8662,0,-57.9607,-59.751 0|1:24:21,3,0:21:836:3,0:120,0:-3.96318,0,-68.3319,-10.2848,-69.235,-79.1205 0|0:38:37,0,0:37:1449:0,0:0,0:0,-11.1381,-130.465,-11.1381,-130.465,-130.465 dDocent_Contig_7930 18 . G A 33.7568 . AB=0.147059;ABP=39.7976;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X1M1X;DP=183;DPB=183;DPRA=0.865672;EPP=20.3821;EPPR=383.018;GTI=0;LEN=1;MEANALT=1;MQM=59.375;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=300;QR=6677;RO=175;RPL=0;RPP=20.3821;RPPR=383.018;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=175;SRP=383.018;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:21:18,3:18:695:3:101:-3.09935,0,-56.5608 0|0:53:52,1:52:1953:1:40:0,-11.9589,-172.008 0|0:23:23,0:23:885:0:0:0,-6.92369,-79.9672 0|0:44:44,0:44:1693:0:0:0,-13.2453,-152.624 0|1:13:11,2:11:425:2:78:-3.48991,0,-34.6896 0|0:29:27,2:27:1026:2:81:0,-1.04414,-84.9623 dDocent_Contig_7931 22 . G T 2381.54 . AB=0.203008;ABP=512.49;AC=5;AF=0.416667;AN=12;AO=154;CIGAR=1X;DP=959;DPB=959;DPRA=0;EPP=337.417;EPPR=1748.87;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.194805;PAIREDR=0.652985;PAO=0;PQA=0;PQR=0;PRO=0;QA=5687;QR=31955;RO=804;RPL=0;RPP=337.417;RPPR=1748.87;RPR=154;RUN=1;SAF=154;SAP=337.417;SAR=0;SRF=804;SRP=1748.87;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:86:74,12:74:2933:12:451:-15.0476,0,-238.182 0/1:165:141,24:141:5681:24:858:-27.8569,0,-461.407 0/1:122:96,26:96:3742:26:1000:-53.5849,0,-300.067 0/1:132:88,44:88:3489:44:1597:-104.255,0,-274.311 0/0:294:274,19:274:10916:19:731:0,-22.4836,-915.583 0/1:160:131,29:131:5194:29:1050:-46.6313,0,-419.162 dDocent_Contig_7932 17 . C T 42.7948 . AB=0.104167;ABP=133.661;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=218;DPB=218;DPRA=1.59615;EPP=31.2394;EPPR=448.162;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.384615;PAIREDR=0.37561;PAO=0;PQA=0;PQR=0;PRO=0;QA=518;QR=8179;RO=205;RPL=0;RPP=31.2394;RPPR=448.162;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=205;SRP=448.162;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:1147:0:0:0,-8.72987,-103.51 0/1:47:42,5:42:1696:5:204:-4.59562,0,-138.713 0/0:26:25,1:25:989:1:41:0,-3.73221,-85.2056 0/1:49:44,5:44:1761:5:192:-2.89641,0,-143.96 0/0:23:23,0:23:923:0:0:0,-6.92369,-83.3737 0/0:44:42,2:42:1663:2:81:0,-5.55959,-142.211 dDocent_Contig_7933 64 . C T 36.749 . AB=0.108696;ABP=64.1892;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=366;DPB=366;DPRA=0.71875;EPP=13.8677;EPPR=786.912;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.587258;PAO=0;PQA=0;PQR=0;PRO=0;QA=204;QR=14104;RO=361;RPL=5;RPP=13.8677;RPPR=786.912;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=361;SRP=786.912;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:46:41,5:41:1619:5:204:-4.89665,0,-132.103 0/0:79:79,0:79:3080:0:0:0,-23.7814,-277.304 0/0:43:43,0:43:1697:0:0:0,-12.9443,-152.963 0/0:44:44,0:44:1720:0:0:0,-13.2453,-155.036 0/0:89:89,0:89:3475:0:0:0,-26.7917,-312.823 0/0:65:65,0:65:2513:0:0:0,-19.5669,-226.321 dDocent_Contig_7934 45 . T G 1785.26 . AB=0.25817;ABP=158.448;AC=6;AF=0.5;AN=12;AO=79;CIGAR=1X;DP=306;DPB=306;DPRA=0;EPP=174.557;EPPR=495.935;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.278481;PAIREDR=0.453744;PAO=0;PQA=0;PQR=0;PRO=0;QA=3109;QR=8915;RO=227;RPL=0;RPP=174.557;RPPR=495.935;RPR=79;RUN=1;SAF=79;SAP=174.557;SAR=0;SRF=227;SRP=495.935;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:20,10:20:799:10:391:-26.5158,0,-63.1978 0/1:77:59,18:59:2316:18:721:-42.0374,0,-185.415 0/1:58:45,13:45:1781:13:491:-27.0619,0,-143.049 0/1:33:20,13:20:786:13:512:-36.4915,0,-61.1233 0/1:47:38,9:38:1498:9:364:-18.976,0,-120.917 0/1:61:45,16:45:1735:16:630:-38.6651,0,-138.007 dDocent_Contig_7935 14 . G A 959.472 . AB=0.165289;ABP=356.242;AC=6;AF=0.5;AN=12;AO=60;CIGAR=1X;DP=363;DPB=363;DPRA=0;EPP=133.299;EPPR=660.966;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.986799;PAO=0;PQA=0;PQR=0;PRO=0;QA=2381;QR=12129;RO=303;RPL=0;RPP=133.299;RPPR=660.966;RPR=60;RUN=1;SAF=60;SAP=133.299;SAR=0;SRF=303;SRP=660.966;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:61:53,8:53:2134:8:319:-10.7142,0,-173.872 0/1:50:44,6:44:1752:6:243:-7.1961,0,-142.842 0/1:94:82,12:82:3280:12:470:-14.3515,0,-266.95 0/1:49:41,8:41:1651:8:325:-14.8692,0,-134.067 0/1:47:33,14:33:1306:14:551:-35.7828,0,-103.657 0/1:62:50,12:50:2006:12:473:-24.2553,0,-162.061 dDocent_Contig_7936 64 . A C 3550.18 . AB=0.335227;ABP=127.525;AC=2;AF=0.166667;AN=12;AO=183;CIGAR=1X;DP=1289;DPB=1289;DPRA=1.17861;EPP=400.39;EPPR=2402.49;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99457;PAO=0;PQA=0;PQR=0;PRO=0;QA=5863;QR=33258;RO=1105;RPL=183;RPP=400.39;RPPR=2402.49;RPR=0;RUN=1;SAF=183;SAP=400.39;SAR=0;SRF=1105;SRP=2402.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:205:203,2:203:6115:2:14:0,-60.3811,-549.198 0/0:185:184,1:184:5594:1:7:0,-54.9905,-502.937 0/0:187:187,0:187:5496:0:0:0,-56.2926,-494.816 0/0:184:180,3:180:5232:3:101:0,-45.9439,-461.67 0/1:299:194,105:194:5914:105:3436:-219.464,0,-442.405 0/1:229:157,72:157:4907:72:2305:-138.776,0,-372.838 dDocent_Contig_7937 18 . G A 191.734 . AB=0.388889;ABP=4.9405;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=185;DPB=185;DPRA=0.761905;EPP=22.5536;EPPR=385.189;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.333333;PAIREDR=0.670455;PAO=0;PQA=0;PQR=0;PRO=0;QA=366;QR=7025;RO=176;RPL=0;RPP=22.5536;RPPR=385.189;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=176;SRP=385.189;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:976:0:0:0,-7.22472,-88.136 0/0:32:31,1:31:1240:1:39:0,-5.7364,-107.973 0/1:18:11,7:11:437:7:286:-20.6963,0,-34.2667 0/0:52:52,0:52:2066:0:0:0,-15.6536,-186.122 0/0:30:29,1:29:1167:1:41:0,-4.93633,-101.213 0/0:29:29,0:29:1139:0:0:0,-8.72987,-102.792 dDocent_Contig_7938 91 . A G 31.529 . AB=0.132075;ABP=65.3275;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=128;DPB=128;DPRA=1.78261;EPP=22.5536;EPPR=261.416;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=310;QR=4029;RO=119;RPL=9;RPP=22.5536;RPPR=261.416;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=119;SRP=261.416;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:29:25,4:25:858:4:140:-4.21506,0,-68.8057 0/0:29:27,2:27:895:2:70:0,-2.08247,-74.206 0/1:24:21,3:21:705:3:100:-2.10565,0,-56.5367 0/0:17:17,0:17:589:0:0:0,-5.11751,-53.3369 0/0:11:11,0:11:381:0:0:0,-3.31133,-34.6237 0/0:18:18,0:18:601:0:0:0,-5.41854,-54.4048 dDocent_Contig_7939 10 . C T 100.407 . AB=0.363636;ABP=4.78696;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=133;DPB=133;DPRA=0.45082;EPP=11.6962;EPPR=283.13;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=161;QR=5158;RO=129;RPL=0;RPP=11.6962;RPPR=283.13;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=129;SRP=283.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:842:0:0:0,-6.32163,-76.0938 0/1:11:7,4:7:287:4:161:-11.5636,0,-22.8939 0/0:41:41,0:41:1656:0:0:0,-12.3422,-149.264 0/0:15:15,0:15:589:0:0:0,-4.51545,-53.3425 0/0:24:24,0:24:937:0:0:0,-7.22472,-84.6269 0/0:21:21,0:21:847:0:0:0,-6.32163,-76.5419 dDocent_Contig_7940 11 . T C 19957 . AB=0.774495;ABP=423.827;AC=7;AF=0.583333;AN=12;AO=622;CIGAR=1X;DP=776;DPB=776;DPRA=0;EPP=1353.67;EPPR=337.417;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.995177;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=24799;QR=6195;RO=154;RPL=0;RPP=1353.67;RPPR=337.417;RPR=622;RUN=1;SAF=622;SAP=1353.67;SAR=0;SRF=154;SRP=337.417;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:102:17,85:17:690:85:3395:-274.888,0,-31.724 0/1:142:14,128:14:565:128:5094:-415.583,0,-8.4453 0/1:78:8,70:8:310:70:2758:-224.857,0,-4.77965 1/1:133:9,124:9:365:124:4967:-413.691,-6.82214,0 0/1:176:52,124:52:2110:124:4982:-395.26,0,-137.09 0/1:145:54,91:54:2155:91:3603:-280.646,0,-150.477 dDocent_Contig_7941 23 . G A 656.965 . AB=0.436364;ABP=4.94488;AC=2;AF=0.166667;AN=12;AO=25;CIGAR=1X;DP=177;DPB=177;DPRA=0.735294;EPP=57.2971;EPPR=330.903;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=983;QR=5947;RO=151;RPL=0;RPP=57.2971;RPPR=330.903;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=151;SRP=330.903;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:18,1:18:694:1:41:0,-2.03446,-58.6937 0/1:36:23,13:23:890:13:513:-35.6789,0,-69.5703 0/0:4:4,0:4:160:0:0:0,-1.20412,-14.7834 0/1:19:8,11:8:319:11:429:-33.2394,0,-23.357 0/0:51:51,0:51:2015:0:0:0,-15.3525,-181.553 0/0:47:47,0:47:1869:0:0:0,-14.1484,-168.424 dDocent_Contig_7943 77 . A C 59.9054 . AB=0.119266;ABP=140.251;AC=2;AF=0.2;AN=10;AO=17;CIGAR=1X;DP=232;DPB=232;DPRA=1.82143;EPP=39.9253;EPPR=469.877;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=606;QR=7810;RO=215;RPL=17;RPP=39.9253;RPPR=469.877;RPR=0;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=215;SRP=469.877;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:70:67,3:67:2437:3:111:0,-10.7182,-209.219 0/1:97:86,11:86:3119:11:386:-5.87471,0,-251.718 0/0:28:28,0:28:1032:0:0:0,-8.42884,-93.1951 0/1:12:10,2:10:357:2:74:-3.41352,0,-28.8574 ./.:.:.:.:.:.:.:. 0/0:25:24,1:24:865:1:35:0,-4.02712,-74.6701 dDocent_Contig_7944 13 . A C 104.903 . AB=0.176471;ABP=33.9218;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=224;DPB=224;DPRA=0.894737;EPP=16.0391;EPPR=476.391;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8119;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.752294;PAO=0;PQA=0;PQR=0;PRO=0;QA=243;QR=8670;RO=218;RPL=0;RPP=16.0391;RPPR=476.391;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=218;SRP=476.391;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:620:0:0:0,-4.81648,-56.1327 0/0:48:48,0:48:1917:0:0:0,-14.4494,-170.747 0/0:38:38,0:38:1513:0:0:0,-11.4391,-136.415 0/0:48:48,0:48:1911:0:0:0,-14.4494,-172.195 0/1:34:28,6:28:1118:6:243:-12.0132,0,-90.668 0/0:40:40,0:40:1591:0:0:0,-12.0412,-143.427 dDocent_Contig_7945 42 . A C 36.3984 . AB=0.125;ABP=61.6401;AC=3;AF=0.25;AN=12;AO=6;CIGAR=1X;DP=487;DPB=487;DPRA=0.109339;EPP=16.0391;EPPR=1047.49;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.950104;PAO=0;PQA=0;PQR=0;PRO=0;QA=245;QR=18711;RO=481;RPL=0;RPP=16.0391;RPPR=1047.49;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=481;SRP=1047.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:71:71,0:71:2749:0:0:0,-21.3731,-247.545 0/1:24:21,3:21:813:3:122:-4.14777,0,-66.2639 0/1:18:16,2:16:628:2:82:-2.36114,0,-51.4362 0/1:6:5,1:5:196:1:41:-2.28839,0,-16.2079 0/0:106:106,0:106:4173:0:0:0,-31.9092,-375.567 0/0:262:262,0:262:10152:0:0:0,-78.8699,-913.134 dDocent_Contig_7946 13 . A G 7721.13 . AB=0.549206;ABP=9.63501;AC=7;AF=0.583333;AN=12;AO=245;CIGAR=1X;DP=390;DPB=390;DPRA=0;EPP=535.021;EPPR=317.874;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.783673;PAIREDR=0.710345;PAO=0;PQA=0;PQR=0;PRO=0;QA=9835;QR=5783;RO=145;RPL=0;RPP=535.021;RPPR=317.874;RPR=245;RUN=1;SAF=245;SAP=535.021;SAR=0;SRF=145;SRP=317.874;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:66:20,46:20:793:46:1853:-147.105,0,-51.8148 0/1:59:21,38:21:828:38:1509:-118.297,0,-57.0686 1/1:75:3,72:3:111:72:2881:-249.031,-12.2252,0 0/1:76:44,32:44:1773:32:1281:-92.6782,0,-136.903 0/1:44:17,27:17:671:27:1099:-85.9464,0,-47.4761 0/1:70:40,30:40:1607:30:1212:-88.277,0,-123.788 dDocent_Contig_7947 22 . A G 263.051 . AB=0.27907;ABP=21.2406;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=119;DPB=119;DPRA=2.71875;EPP=33.4109;EPPR=231.015;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.785714;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=545;QR=4180;RO=105;RPL=0;RPP=33.4109;RPPR=231.015;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=105;SRP=231.015;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:406:0:0:0,-3.0103,-36.9004 0/0:21:21,0:21:831:0:0:0,-6.32163,-75.1035 0/0:1:1,0:1:31:0:0:0,-0.30103,-3.09945 0/1:10:7,3:7:279:3:108:-7.06039,0,-22.4703 0/1:33:24,9:24:954:9:356:-22.4661,0,-76.2241 0/0:44:42,2:42:1679:2:81:0,-5.55959,-143.65 dDocent_Contig_7948 10 . C T 1726.71 . AB=0.383234;ABP=22.7876;AC=6;AF=0.5;AN=12;AO=64;CIGAR=1X;DP=167;DPB=167;DPRA=0;EPP=141.985;EPPR=226.672;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.421875;PAIREDR=0.786408;PAO=0;PQA=0;PQR=0;PRO=0;QA=2578;QR=4143;RO=103;RPL=0;RPP=141.985;RPPR=226.672;RPR=64;RUN=1;SAF=64;SAP=141.985;SAR=0;SRF=103;SRP=226.672;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:27:22,5:22:882:5:205:-10.7072,0,-71.5597 0/1:27:12,15:12:491:15:602:-46.3885,0,-36.4131 0/1:22:7,15:7:279:15:600:-47.7147,0,-18.857 0/1:15:13,2:13:523:2:80:-3.07613,0,-42.9017 0/1:25:14,11:14:551:11:441:-32.5197,0,-42.3998 0/1:51:35,16:35:1417:16:650:-43.4808,0,-112.424 dDocent_Contig_7949 30 . T C 246.66 . AB=0.0632911;ABP=133.876;AC=0;AF=0;AN=12;AO=5;CIGAR=1M1X2M;DP=428;DPB=437.5;DPRA=1.13181;EPP=13.8677;EPPR=875.942;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.962687;PAO=0;PQA=0;PQR=0;PRO=0;QA=194;QR=15718;RO=402;RPL=0;RPP=13.8677;RPPR=875.942;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=402;SRP=875.942;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:78:78,0,0:78:3039:0,0:0,0:0,-23.4803,-273.631,-23.4803,-273.631,-273.631 0|0:65:65,0,0:65:2560:0,0:0,0:0,-19.5669,-230.558,-19.5669,-230.558,-230.558 0|0:59:59,0,0:59:2339:0,0:0,0:0,-17.7608,-210.685,-17.7608,-210.685,-210.685 0|0:75:73,0,0:73:2840:0,0:0,0:0,-21.9752,-255.325,-21.9752,-255.325,-255.325 0|0:72:67,5,0:67:2575:5,0:199,0:0,-3.3861,-213.628,-20.169,-215.133,-231.519 0|0:79:60,14,5:60:2365:14,5:539,194:-26.1889,0,-190.361,-28.315,-178.641,-221.387 dDocent_Contig_7950 42 . G T 364.875 . AB=0.184211;ABP=134.67;AC=3;AF=0.25;AN=12;AO=36;CIGAR=1X;DP=288;DPB=288;DPRA=6.2;EPP=81.1833;EPPR=550.221;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.972222;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1260;QR=9935;RO=252;RPL=0;RPP=81.1833;RPPR=550.221;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=252;SRP=550.221;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:47,1:47:1861:1:39:0,-10.5529,-163.806 0/1:77:65,12:65:2598:12:408:-13.8595,0,-210.773 0/0:79:72,7:72:2831:7:260:0,-0.028804,-231.141 0/1:62:54,8:54:2104:8:269:-5.86707,0,-170.884 0/1:13:5,8:5:194:8:284:-21.9821,0,-13.916 0/0:9:9,0:9:347:0:0:0,-2.70927,-31.5807 dDocent_Contig_7951 29 . A G 33.3901 . AB=0.1;ABP=100.292;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=285;DPB=285;DPRA=1.75;EPP=24.725;EPPR=600.165;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.349091;PAO=0;PQA=0;PQR=0;PRO=0;QA=406;QR=10741;RO=275;RPL=0;RPP=24.725;RPPR=600.165;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=275;SRP=600.165;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:44,0:44:1716:0:0:0,-13.2453,-154.666 0/0:35:35,0:35:1377:0:0:0,-10.536,-124.192 0/0:35:35,0:35:1398:0:0:0,-10.536,-126.075 0/0:38:38,0:38:1461:0:0:0,-11.4391,-131.735 0/1:70:63,7:63:2447:7:284:-4.86169,0,-199.31 0/0:63:60,3:60:2342:3:122:0,-7.5924,-199.575 dDocent_Contig_7952 12 . C T 36.9194 . AB=0.121951;ABP=53.9075;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=225;DPB=225;DPRA=1.08333;EPP=18.2106;EPPR=476.391;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=271;QR=8780;RO=218;RPL=0;RPP=18.2106;RPPR=476.391;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=218;SRP=476.391;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:37,1:37:1476:1:40:0,-7.44346,-129.09 0/0:38:37,1:37:1507:1:40:0,-7.44346,-131.87 0/1:41:36,5:36:1462:5:191:-5.21464,0,-119.479 0/0:77:77,0:77:3086:0:0:0,-23.1793,-277.815 0/0:3:3,0:3:123:0:0:0,-0.90309,-11.4648 0/0:28:28,0:28:1126:0:0:0,-8.42884,-101.618 dDocent_Contig_7953 32 . G T 84.6032 . AB=0.11215;ABP=142.817;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=632;DPB=632;DPRA=0.689362;EPP=31.2394;EPPR=1347.15;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.447496;PAO=0;PQA=0;PQR=0;PRO=0;QA=506;QR=24145;RO=619;RPL=0;RPP=31.2394;RPPR=1347.15;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=619;SRP=1347.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:83:83,0:83:3293:0:0:0,-24.9855,-296.449 0/0:119:119,0:119:4619:0:0:0,-35.8226,-415.675 0/0:125:125,0:125:4847:0:0:0,-37.6287,-436.15 0/0:143:143,0:143:5530:0:0:0,-43.0473,-497.584 0/0:55:54,1:54:2141:1:41:0,-12.4621,-188.783 0/1:107:95,12:95:3715:12:465:-9.9832,0,-302.178 dDocent_Contig_7954 55 . C T 1516.88 . AB=0.0454545;ABP=358.342;AC=0;AF=0;AN=12;AO=9;CIGAR=1X3M1X;DP=276;DPB=276;DPRA=0;EPP=22.5536;EPPR=422.104;GTI=0;LEN=1;MEANALT=2.75;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.888889;PAIREDR=0.487047;PAO=0;PQA=0;PQR=0;PRO=0;QA=327;QR=7505;RO=193;RPL=9;RPP=22.5536;RPPR=422.104;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=193;SRP=422.104;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:54:37,1,15:37:1455:1,15:35,585:-36.9706,-45.2633,-164.642,0,-116.857,-115.188 0|0:49:34,1,13:34:1313:1,13:35,505:-31.345,-38.7341,-146.253,0,-105.057,-103.99 0|0:53:29,6,18:29:1096:6,18:220,676:-46.647,-37.3978,-125.413,0,-71.8496,-84.4104 0|0:42:27,1,13:27:1071:1,13:37,501:-33.0819,-38.183,-126.057,0,-85.2239,-84.3368 0|0:25:20,0,5:20:779:0,5:0,194:-10.3063,-16.3269,-80.3498,0,-64.4109,-62.9058 0|0:53:46,0,6:46:1791:0,6:0,225:-4.55875,-18.4061,-165.599,0,-147.173,-145.367 dDocent_Contig_7955 1 . N G 126.073 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=3.44459;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=30.4;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0.2;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=185;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=2;SAP=3.44459;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:75:-4.33216,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:110:-7.97327,-0.90309,0 dDocent_Contig_7956 20 . G T 3028.86 . AB=0.523077;ABP=3.9123;AC=4;AF=0.333333;AN=12;AO=102;CIGAR=1X;DP=251;DPB=251;DPRA=1.74107;EPP=224.5;EPPR=326.56;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.986577;PAO=0;PQA=0;PQR=0;PRO=0;QA=4085;QR=5958;RO=149;RPL=0;RPP=224.5;RPPR=326.56;RPR=102;RUN=1;SAF=102;SAP=224.5;SAR=0;SRF=149;SRP=326.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1407:0:0:0,-10.536,-126.884 0/1:46:39,7:39:1559:7:284:-12.0866,0,-126.706 0/0:21:21,0:21:837:0:0:0,-6.32163,-75.6463 0/1:44:28,16:28:1117:16:619:-42.7852,0,-87.5697 0/1:58:8,50:8:319:50:2015:-164.077,0,-11.6153 0/1:47:18,29:18:719:29:1167:-91.1588,0,-50.8893 dDocent_Contig_7960 7 . T C 587.133 . AB=0.46988;ABP=3.66436;AC=6;AF=0.5;AN=12;AO=39;CIGAR=1X3M1I1M2X;DP=83;DPB=88.7143;DPRA=0;EPP=87.6977;EPPR=96.3836;GTI=0;LEN=1;MEANALT=1.16667;MQM=26.8462;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1528;QR=1630;RO=43;RPL=0;RPP=87.6977;RPPR=96.3836;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=43;SRP=96.3836;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:10:6,3:6:227:3:117:-4.50716,0,-17.8032 0|1:7:2,5:2:78:5:196:-9.65823,0,-5.29626 0|1:16:8,8:8:284:8:315:-14.7133,0,-21.0802 0|1:20:14,6:14:546:6:227:-8.60221,0,-43.4647 0|1:13:8,5:8:305:5:195:-8.38225,0,-23.8967 0|1:17:5,12:5:190:12:478:-24.0718,0,-12.3492 dDocent_Contig_7962 16 . G A 2219.15 . AB=0.157254;ABP=924.41;AC=3;AF=0.25;AN=12;AO=166;CIGAR=1X;DP=1748;DPB=1748;DPRA=1.18182;EPP=363.475;EPPR=3436.11;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6481;QR=62867;RO=1581;RPL=0;RPP=363.475;RPPR=3436.11;RPR=166;RUN=1;SAF=166;SAP=363.475;SAR=0;SRF=1581;SRP=3436.11;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:259:226,33:226:8883:33:1301:-39.3936,0,-721.014 0/1:283:239,43:239:9469:43:1674:-65.591,0,-766.353 0/1:361:295,66:295:11785:66:2563:-122.152,0,-951.154 0/0:319:296,23:296:11811:23:903:0,-14.4532,-980.587 0/0:253:253,0:253:10124:0:0:0,-76.1606,-910.482 0/0:273:272,1:272:10795:1:40:0,-78.1855,-966.86 dDocent_Contig_7963 15 . T A 4677.08 . AB=0.51634;ABP=3.71993;AC=4;AF=0.333333;AN=12;AO=158;CIGAR=1X;DP=331;DPB=331;DPRA=6.12;EPP=346.103;EPPR=378.675;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.976879;PAO=0;PQA=0;PQR=0;PRO=0;QA=6290;QR=6897;RO=173;RPL=0;RPP=346.103;RPPR=378.675;RPR=158;RUN=1;SAF=158;SAP=346.103;SAR=0;SRF=173;SRP=378.675;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:11:11,0:11:447:0:0:0,-3.31133,-40.5859 0/1:136:37,99:37:1457:99:3930:-312.751,0,-90.435 0/1:27:16,11:16:645:11:438:-31.6444,0,-50.2563 0/1:79:42,37:42:1662:37:1478:-109.485,0,-126.032 0/0:14:14,0:14:566:0:0:0,-4.21442,-51.2802 0/1:64:53,11:53:2120:11:444:-21.0488,0,-171.711 dDocent_Contig_7964 20 . T G 768.65 . AB=0.238095;ABP=90.593;AC=3;AF=0.25;AN=12;AO=41;CIGAR=1X;DP=387;DPB=387;DPRA=0;EPP=92.0407;EPPR=754.34;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1635;QR=13713;RO=346;RPL=0;RPP=92.0407;RPPR=754.34;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=346;SRP=754.34;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:47:41,6:41:1642:6:243:-8.09919,0,-133.86 0/0:78:75,3:75:2931:3:123:0,-12.0156,-252.423 0/1:39:31,8:31:1235:8:324:-17.7887,0,-99.6796 0/1:61:40,21:40:1599:21:825:-56.199,0,-125.785 0/0:84:82,2:82:3256:2:82:0,-17.5068,-285.318 0/0:78:77,1:77:3050:1:38:0,-19.6831,-270.798 dDocent_Contig_7965 11 . G A 172.506 . AB=0.109948;ABP=255.413;AC=1;AF=0.0833333;AN=12;AO=47;CIGAR=1X;DP=840;DPB=840;DPRA=2.07669;EPP=105.07;EPPR=1724.99;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.87234;PAIREDR=0.972257;PAO=0;PQA=0;PQR=0;PRO=0;QA=1899;QR=31621;RO=793;RPL=0;RPP=105.07;RPPR=1724.99;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=793;SRP=1724.99;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:159:147,12:147:5864:12:484:0,-3.95235,-483.633 0/1:191:170,21:170:6767:21:844:-18.7735,0,-551.241 0/0:160:155,5:155:6135:5:205:0,-29.3298,-533.079 0/0:167:158,9:158:6295:9:366:0,-16.9671,-532.996 0/0:61:61,0:61:2447:0:0:0,-18.3628,-220.372 0/0:102:102,0:102:4113:0:0:0,-30.7051,-370.128 dDocent_Contig_7966 191 . G T 360.917 . AB=0.197917;ABP=79.1023;AC=3;AF=0.25;AN=12;AO=20;CIGAR=1X;DP=191;DPB=191;DPRA=2.58065;EPP=46.4397;EPPR=372.161;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=804;QR=6828;RO=170;RPL=20;RPP=46.4397;RPPR=372.161;RPR=0;RUN=1;SAF=0;SAP=46.4397;SAR=20;SRF=0;SRP=372.161;SRR=170;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:286:0:0:0,-2.10721,-26.1148 0/1:24:20,4:20:807:4:158:-7.37576,0,-65.7207 0/1:24:17,6:17:687:6:244:-15.2628,0,-55.1095 0/0:24:24,0:24:952:0:0:0,-7.22472,-85.9752 0/0:64:63,1:63:2538:1:38:0,-15.4687,-224.752 0/1:48:39,9:39:1558:9:364:-18.6749,0,-126.008 dDocent_Contig_7967 9 . T C 4731.04 . AB=0.0458015;ABP=237.745;AC=6;AF=0.5;AN=12;AO=6;CIGAR=1X2M10I10M;DP=791;DPB=966.231;DPRA=0;EPP=16.0391;EPPR=1004.06;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.997831;PAO=0;PQA=0;PQR=0;PRO=0;QA=234;QR=17867;RO=461;RPL=0;RPP=16.0391;RPPR=1004.06;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=461;SRP=1004.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:114:66,30,6,0:66:2554:30,6,0:1165,236,0:-75.8665,0,-200.774,-76.319,-190.391,-284.307,-95.7345,-209.805,-286.113,-305.527 0|1:137:50,50,11,0:50:1936:50,11,0:1936,436,0:-143.993,0,-143.997,-123.153,-123.157,-278.881,-159.045,-159.049,-282.192,-318.083 0|1:91:38,42,6,0:38:1462:42,6,0:1627,238,0:-122.206,0,-107.371,-114.052,-100.421,-232.267,-133.645,-120.014,-234.073,-253.666 0|1:131:84,28,2,6:84:3239:28,2,6:1085,77,234:-63.8507,0,-257.544,-82.8151,-259.651,-348.183,-69.9021,-246.738,-329.55,-334.066 0|1:188:137,24,0,0:137:5344:24,0,0:939,0,0:-35.9852,0,-432.088,-77.2263,-439.313,-516.52,-77.2263,-439.313,-516.52,-516.52 0|1:130:86,21,0,0:86:3332:21,0,0:830,0,0:-42.4245,0,-267.411,-68.3131,-273.732,-342.037,-68.3131,-273.732,-342.037,-342.037 dDocent_Contig_7968 10 . A G 17758.8 . AB=0.738676;ABP=287.027;AC=7;AF=0.583333;AN=12;AO=561;CIGAR=1X;DP=721;DPB=721;DPRA=0;EPP=1221.21;EPPR=350.446;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.910873;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=22165;QR=6416;RO=160;RPL=0;RPP=1221.21;RPPR=350.446;RPR=561;RUN=1;SAF=561;SAP=1221.21;SAR=0;SRF=160;SRP=350.446;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:5,30:5:193:30:1167:-94.7804,0,-7.20216 0/1:87:51,36:51:2042:36:1424:-102.228,0,-157.777 0/1:125:35,90:35:1409:90:3579:-284.506,0,-89.4337 0/1:91:13,78:13:528:78:3059:-248.004,0,-20.4728 0/1:236:46,190:46:1836:190:7529:-606.192,0,-94.4072 1/1:147:10,137:10:408:137:5407:-449.385,-7.17083,0 dDocent_Contig_7969 11 . A G 99.2319 . AB=0.307692;ABP=7.18621;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=156;DPB=156;DPRA=0.943396;EPP=16.0391;EPPR=326.56;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.333333;PAIREDR=0.66443;PAO=0;PQA=0;PQR=0;PRO=0;QA=241;QR=5944;RO=149;RPL=0;RPP=16.0391;RPPR=326.56;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=149;SRP=326.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:13:9,4:9:360:4:163:-11.145,0,-28.8489 0/0:25:24,0:24:963:0:0:0,-7.22472,-86.5803 0/0:22:22,0:22:883:0:0:0,-6.62266,-79.7759 0/0:37:35,2:35:1397:2:78:0,-3.73481,-118.577 0/0:33:33,0:33:1295:0:0:0,-9.93399,-116.806 0/0:26:26,0:26:1046:0:0:0,-7.82678,-94.4305 dDocent_Contig_7970 44 . T C 3268.43 . AB=0.871795;ABP=143.488;AC=1;AF=0.0833333;AN=12;AO=102;CIGAR=1X;DP=640;DPB=640;DPRA=1.11855;EPP=224.5;EPPR=948.513;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.920074;PAO=0;PQA=0;PQR=0;PRO=0;QA=4040;QR=21336;RO=538;RPL=0;RPP=224.5;RPPR=1162.59;RPR=102;RUN=1;SAF=102;SAP=224.5;SAR=0;SRF=512;SRP=956.343;SRR=26;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:189:189,0:189:7508:0:0:0,-56.8947,-675.358 0/0:94:94,0:94:3704:0:0:0,-28.2968,-333.381 0/0:124:124,0:124:4947:0:0:0,-37.3277,-445.108 0/0:110:110,0:110:4337:0:0:0,-33.1133,-390.281 0/0:6:6,0:6:230:0:0:0,-1.80618,-21.0603 0/1:117:15,102:15:610:102:4040:-328.366,0,-20.0167 dDocent_Contig_7971 190 . A T 450.484 . AB=0.263889;ABP=37.8745;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1X;DP=332;DPB=332;DPRA=1.075;EPP=52.9542;EPPR=673.995;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.967638;PAO=0;PQA=0;PQR=0;PRO=0;QA=929;QR=12335;RO=309;RPL=23;RPP=52.9542;RPPR=673.995;RPR=0;RUN=1;SAF=0;SAP=52.9542;SAR=23;SRF=0;SRP=673.995;SRR=309;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:74:74,0:74:2973:0:0:0,-22.2762,-267.655 0/0:100:96,4:96:3822:4:160:0,-15.3196,-329.18 0/0:58:58,0:58:2313:0:0:0,-17.4597,-208.327 0/1:69:51,18:51:2041:18:728:-45.0741,0,-163.104 0/0:28:28,0:28:1105:0:0:0,-8.42884,-99.7303 0/1:3:2,1:2:81:1:41:-3.19148,0,-6.78264 dDocent_Contig_7972 205 . A G 2465.18 . AB=0.484211;ABP=3.21602;AC=3;AF=0.25;AN=12;AO=88;CIGAR=1X;DP=333;DPB=333;DPRA=1.39205;EPP=194.1;EPPR=535.021;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3208;QR=8867;RO=245;RPL=88;RPP=194.1;RPPR=535.021;RPR=0;RUN=1;SAF=0;SAP=194.1;SAR=88;SRF=0;SRP=535.021;SRR=245;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:38,2:38:1394:2:72:0,-5.20456,-118.92 0/0:72:70,2:70:2504:2:72:0,-14.8375,-218.762 1/1:38:0,38:0:0:38:1384:-124.856,-11.4391,0 0/1:95:49,46:49:1787:46:1680:-122.884,0,-132.509 0/0:18:18,0:18:640:0:0:0,-5.41854,-57.9252 0/0:70:70,0:70:2542:0:0:0,-21.0721,-229.02 dDocent_Contig_7973 16 . T C 1477.04 . AB=0.0714286;ABP=70.0157;AC=0;AF=0;AN=12;AO=4;CIGAR=1X2M1X1M;DP=220;DPB=220;DPRA=0.791667;EPP=11.6962;EPPR=311.359;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.422535;PAO=0;PQA=0;PQR=0;PRO=0;QA=160;QR=5565;RO=142;RPL=0;RPP=11.6962;RPPR=311.359;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=142;SRP=311.359;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:28:14,0,0,2,12:14:556:0,0,2,12:0,0,82,489:-36.1252,-40.3396,-86.1074,-40.3396,-86.1074,-86.1074,-33.5711,-79.3387,-79.3387,-78.7366,0,-45.762,-45.762,-38.9922,-42.1496 0|0:62:29,0,0,6,26:29:1139:0,0,6,26:0,0,241,1047:-77.5603,-86.2902,-179.964,-86.2902,-179.964,-179.964,-66.4311,-160.104,-160.104,-158.298,0,-93.6715,-93.6715,-73.8108,-85.8447 0|0:15:12,1,0,0,1:12:459:1,0,0,1:40,0,0,41:0,-0.320575,-37.6573,-3.61236,-37.9583,-41.2543,-3.61236,-37.9583,-41.2543,-41.2543,-0.226631,-34.5724,-37.8686,-37.8686,-37.5676 0|0:37:25,0,0,4,6:25:965:0,0,4,6:0,0,151,245:-12.7046,-20.2304,-99.47,-20.2304,-99.47,-99.47,-7.86423,-87.0972,-87.0972,-85.8931,0,-79.2506,-79.2506,-66.8776,-77.4445 0|0:42:28,3,0,0,11:28:1107:3,0,0,11:120,0,0,448:-28.5347,-27.0798,-117.268,-36.9635,-118.171,-128.056,-36.9635,-118.171,-128.056,-128.056,0,-81.2098,-91.0955,-91.0955,-87.7842 0|0:36:34,0,2,0,0:34:1339:0,2,0,0:0,71,0,0:0,-10.235,-120.424,-4.09765,-114.643,-114.041,-10.235,-120.424,-114.643,-120.424,-10.235,-120.424,-114.643,-120.424,-120.424 dDocent_Contig_7974 209 . N G 164.734 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=163;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 1/1:1:0,1:0:0:1:40:-3.99568,-0.30103,0 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_7975 20 . A T 700.494 . AB=0.303922;ABP=37.0726;AC=4;AF=0.333333;AN=12;AO=36;CIGAR=1X;DP=214;DPB=214;DPRA=0;EPP=81.1833;EPPR=389.532;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1375;QR=7028;RO=178;RPL=0;RPP=81.1833;RPPR=389.532;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=178;SRP=389.532;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:11:5,6:5:189:6:236:-18.3002,0,-14.0606 0/1:21:13,8:13:515:8:326:-23.3882,0,-40.3747 0/1:53:45,8:45:1745:8:295:-10.9329,0,-141.313 0/1:17:8,9:8:311:9:327:-24.6498,0,-23.2335 0/0:63:59,4:59:2354:4:151:0,-5.01176,-198.055 0/0:49:48,1:48:1914:1:40:0,-10.7548,-168.467 dDocent_Contig_7976 1 . N G 305.927 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=315;QR=0;RO=0;RPL=0;RPP=20.3821;RPPR=0;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:120:-11.1873,-0.90309,0 1/1:2:0,2:0:0:2:73:-6.93007,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 1/1:1:0,1:0:0:1:40:-3.99568,-0.30103,0 dDocent_Contig_7977 12 . A T 16708.7 . AB=0.0533431;ABP=4745.84;AC=0;AF=0;AN=12;AO=146;CIGAR=1X3M1X;DP=2737;DPB=2726.4;DPRA=0;EPP=320.045;EPPR=2869.41;GTI=0;LEN=1;MEANALT=12.3333;MQM=59.3014;MQMR=59.9617;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.918168;PAO=0;PQA=0;PQR=0;PRO=0;QA=5760;QR=52322;RO=1332;RPL=0;RPP=320.045;RPPR=2895.41;RPR=146;RUN=1;SAF=146;SAP=320.045;SAR=0;SRF=1329;SRP=2869.41;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:417:207,44,23,93:207:8106:44,23,93:1737,893,3576:-228.399,-151.166,-804.432,-217.365,-744.331,-876.952,0,-526.966,-593.164,-638.514 0|0:668:349,62,46,144:349:13744:62,46,144:2418,1823,5683:-362.467,-269.093,-1380.99,-317.511,-1249.64,-1434.23,0,-932.129,-980.548,-1087.21 0|0:256:119,32,9,61:119:4670:32,9,61:1255,359,2451:-166.15,-99.5516,-473.967,-172.406,-454.034,-553.746,0,-281.63,-354.486,-365.689 0|0:428:225,46,16,102:225:8843:46,16,102:1810,634,4031:-263.888,-190.364,-903.678,-279.452,-865.358,-1001.8,0,-585.911,-675.001,-696.464 0|0:514:260,43,29,112:260:10216:43,29,112:1695,1136,4428:-286.067,-225.455,-1052.76,-270.948,-972.319,-1102.47,0,-701.373,-746.866,-806.537 0|0:454:172,62,23,132:172:6743:62,23,132:2434,915,5191:-375.125,-227.675,-763.494,-351.592,-706.848,-899.152,0,-355.256,-479.173,-514.747 dDocent_Contig_7978 182 . C G 207.986 . AB=0.583333;ABP=3.73412;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=60;DPB=60;DPRA=1.25;EPP=18.2106;EPPR=118.098;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.943396;PAO=0;PQA=0;PQR=0;PRO=0;QA=284;QR=2110;RO=53;RPL=7;RPP=18.2106;RPPR=118.098;RPR=0;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=118.098;SRR=53;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:13:13,0:13:523:0:0:0,-3.91339,-47.4166 0/0:14:14,0:14:555:0:0:0,-4.21442,-50.2912 0/0:7:7,0:7:261:0:0:0,-2.10721,-23.8351 0/1:12:5,7:5:204:7:284:-22.3214,0,-15.1317 0/0:9:9,0:9:367:0:0:0,-2.70927,-33.395 0/0:5:5,0:5:200:0:0:0,-1.50515,-18.3784 dDocent_Contig_7979 55 . C G 238.901 . AB=0.162393;ABP=118.841;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=369;DPB=369;DPRA=0.826733;EPP=46.4397;EPPR=760.854;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.6;PAIREDR=0.696275;PAO=0;PQA=0;PQR=0;PRO=0;QA=722;QR=13033;RO=349;RPL=12;RPP=4.74748;RPPR=9.78604;RPR=8;RUN=1;SAF=12;SAP=4.74748;SAR=8;SRF=191;SRP=9.78604;SRR=158;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:49,1:49:1818:1:37:0,-11.3537,-160.154 0/1:93:80,13:80:2992:13:458:-13.5468,0,-241.429 0/1:24:18,6:18:671:6:227:-13.5652,0,-53.4909 0/0:91:91,0:91:3369:0:0:0,-27.3937,-303.348 0/0:55:55,0:55:2068:0:0:0,-16.5566,-186.338 0/0:56:56,0:56:2115:0:0:0,-16.8577,-190.556 dDocent_Contig_7980 31 . T A 168.253 . AB=0.115385;ABP=69.8248;AC=0;AF=0;AN=12;AO=14;CIGAR=1M1X5M;DP=357;DPB=354.571;DPRA=0.682119;EPP=33.4109;EPPR=708.739;GTI=0;LEN=1;MEANALT=2.25;MQM=60;MQMR=59.7477;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.803077;PAO=0;PQA=0;PQR=0;PRO=0;QA=562;QR=12827;RO=325;RPL=0;RPP=33.4109;RPPR=708.739;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=325;SRP=708.739;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:52:36,10,6:36:1415:10,6:355,240:-18.0471,0,-113.368,-9.09854,-96.6089,-123.707 0|0:62:57,1,3:57:2243:1,3:41,121:0,-13.7731,-197.973,-7.18566,-188.3,-190.781 0|0:36:34,1,1:34:1334:1,1:40,41:0,-6.94488,-116.329,-6.84599,-113.245,-116.239 0|0:56:50,2,4:50:1969:2,4:81,160:0,-8.37068,-169.733,-1.87556,-157.156,-162.631 0|0:60:57,3,0:57:2264:3,0:119,0:0,-6.9664,-191.658,-17.1587,-192.561,-202.358 0|0:91:91,0,0:91:3602:0,0:0,0:0,-27.3937,-321.802,-27.3937,-321.802,-321.802 dDocent_Contig_7981 26 . G A 1702.58 . AB=0.198565;ABP=332.908;AC=4;AF=0.333333;AN=12;AO=92;CIGAR=1X;DP=680;DPB=680;DPRA=0;EPP=202.786;EPPR=1279.84;GTI=0;LEN=1;MEANALT=1;MQM=59.6522;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.967687;PAO=0;PQA=0;PQR=0;PRO=0;QA=3688;QR=23342;RO=588;RPL=0;RPP=202.786;RPPR=1279.84;RPR=92;RUN=1;SAF=92;SAP=202.786;SAR=0;SRF=588;SRP=1279.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:48:36,12:36:1441:12:470:-28.197,0,-115.492 0/1:91:75,16:75:2974:16:649:-31.3496,0,-240.362 0/1:183:136,47:136:5408:47:1898:-115.931,0,-431.461 0/1:96:88,8:88:3502:8:320:-0.261042,0,-286.323 0/0:136:134,2:134:5297:2:76:0,-33.7258,-469.375 0/0:126:119,7:119:4720:7:275:0,-12.8488,-399.642 dDocent_Contig_7982 47 . C G 168.64 . AB=0.172414;ABP=57.0725;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=2X;DP=233;DPB=233;DPRA=1.65714;EPP=24.725;EPPR=485.077;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=391;QR=8793;RO=222;RPL=0;RPP=24.725;RPPR=485.077;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=222;SRP=485.077;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:58:48,10:48:1884:10:391:-18.0858,0,-152.313 0|0:39:38,0:38:1487:0:0:0,-11.4391,-133.992 0|0:35:35,0:35:1398:0:0:0,-10.536,-126.077 0|0:31:31,0:31:1225:0:0:0,-9.33193,-110.515 0|0:16:16,0:16:634:0:0:0,-4.81648,-57.3936 0|0:54:54,0:54:2165:0:0:0,-16.2556,-195.026 dDocent_Contig_7983 27 . C A 52.4189 . AB=0.2;ABP=14.7363;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=89;DPB=89;DPRA=1.01351;EPP=9.52472;EPPR=189.757;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=8.67362e-19;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=121;QR=3404;RO=86;RPL=0;RPP=9.52472;RPPR=189.757;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=86;SRP=189.757;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:11:11,0:11:437:0:0:0,-3.31133,-39.6831 0/1:15:12,3:12:474:3:121:-6.76475,0,-38.4942 0/0:5:5,0:5:203:0:0:0,-1.50515,-18.6531 0/0:11:11,0:11:442:0:0:0,-3.31133,-40.1343 0/0:37:37,0:37:1449:0:0:0,-11.1381,-130.655 0/0:10:10,0:10:399:0:0:0,-3.0103,-36.2668 dDocent_Contig_7984 22 . C G 1069.62 . AB=0.714286;ABP=22.5536;AC=2;AF=0.166667;AN=12;AO=38;CIGAR=1X;DP=473;DPB=473;DPRA=0.566225;EPP=85.5263;EPPR=947.601;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997701;PAO=0;PQA=0;PQR=0;PRO=0;QA=1494;QR=17419;RO=435;RPL=0;RPP=85.5263;RPPR=947.601;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=435;SRP=947.601;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:61:61,0:61:2439:0:0:0,-18.3628,-219.662 0/0:122:119,3:119:4762:3:113:0,-26.1896,-417.944 0/0:109:109,0:109:4390:0:0:0,-32.8123,-395.023 0/0:132:132,0:132:5269:0:0:0,-39.736,-474.045 0/1:24:5,19:5:198:19:763:-61.7658,0,-10.9722 0/1:25:9,16:9:361:16:618:-48.4178,0,-25.3276 dDocent_Contig_7985 9 . G A 1405.02 . AB=0.225806;ABP=43.4978;AC=7;AF=0.583333;AN=12;AO=14;CIGAR=1X7M;DP=368;DPB=368;DPRA=0;EPP=12.937;EPPR=385.189;GTI=0;LEN=1;MEANALT=11;MQM=44.8571;MQMR=60;NS=6;NUMALT=7;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=528;QR=6885;RO=176;RPL=0;RPP=33.4109;RPPR=385.189;RPR=14;RUN=1;SAF=11;SAP=12.937;SAR=3;SRF=176;SRP=385.189;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:36:9,8,4,8,0,5,0,1:9:358:8,4,8,0,5,0,1:135,108,305,0,145,0,41:-21.8131,-16.9656,-44.0599,-16.851,-38.8096,-45.1602,0,-21.9794,-21.8646,-27.126,-24.5223,-46.4681,-46.3643,-29.5342,-54.0325,-14.3321,-36.2949,-36.1812,-19.3465,-43.8473,-42.3421,-24.5223,-46.4681,-46.3643,-29.5342,-54.0325,-43.8473,-54.0325,-21.1327,-43.0816,-42.9769,-26.1452,-50.6452,-40.4597,-50.6452,-50.3442 1|1:62:3,5,11,16,0,3,14,0:3:120:5,11,16,0,3,14,0:160,286,599,0,87,528,0:-78.0974,-67.4615,-75.8458,-59.5644,-57.9174,-66.142,-32.0769,-30.4293,-22.537,-37.1521,-79.0005,-77.351,-69.4533,-41.9685,-88.8897,-72.8887,-71.2397,-63.3435,-35.857,-82.7779,-81.8748,-37.0422,-35.3942,-27.5007,0,-46.9335,-40.8219,-42.7191,-79.0005,-77.351,-69.4533,-41.9685,-88.8897,-82.7779,-46.9335,-88.8897 0|1:32:13,1,6,4,3,1,0,3:13:507:1,6,4,3,1,0,3:24,154,160,119,36,0,123:-9.03545,-11.3654,-52.7696,-2.55396,-42.6669,-42.4432,0,-40.1374,-31.3186,-40.5176,-5.63257,-45.7581,-36.9408,-34.4083,-46.4391,-10.2795,-50.403,-41.5828,-39.0537,-44.6746,-51.6864,-12.9488,-53.0706,-44.2494,-41.7217,-47.3421,-51.9875,-54.6552,-2.77747,-42.9115,-34.0916,-31.5603,-37.1824,-41.8279,-44.4959,-43.5928 0|1:37:10,6,10,7,0,4,0,0:10:395:6,10,7,0,4,0,0:119,240,276,0,109,0,0:-19.279,-15.014,-45.7499,-6.42262,-31.7143,-35.9598,0,-25.2928,-16.7047,-30.4598,-22.2893,-47.5561,-38.9701,-32.567,-54.8315,-14.7667,-40.0425,-31.4594,-25.0467,-47.3131,-46.109,-22.2893,-47.5561,-38.9701,-32.567,-54.8315,-47.3131,-54.8315,-22.2893,-47.5561,-38.9701,-32.567,-54.8315,-47.3131,-54.8315,-54.8315 0|1:106:80,2,14,6,0,0,0,0:80:3112:2,14,6,0,0,0,0:62,367,237,0,0,0,0:-1.12965,-20.7756,-275.993,0,-251.35,-251.57,-6.13978,-257.553,-236.744,-260.182,-25.212,-276.595,-255.785,-261.988,-281.03,-25.212,-276.595,-255.785,-261.988,-281.03,-281.03,-25.212,-276.595,-255.785,-261.988,-281.03,-281.03,-281.03,-25.212,-276.595,-255.785,-261.988,-281.03,-281.03,-281.03,-281.03 0|1:95:61,16,13,4,1,0,0,0:61:2393:16,13,4,1,0,0,0:524,380,152,40,0,0,0:-21.4894,0,-192.062,-12.9793,-170.004,-205.917,-28.0445,-185.079,-198.032,-223.706,-37.4093,-194.436,-207.389,-222.469,-233.967,-39.8522,-196.878,-209.831,-224.911,-234.268,-236.71,-39.8522,-196.878,-209.831,-224.911,-234.268,-236.71,-236.71,-39.8522,-196.878,-209.831,-224.911,-234.268,-236.71,-236.71,-236.71 dDocent_Contig_7986 19 . C T 646.236 . AB=0.205882;ABP=28.557;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=9M1X4M;DP=139;DPB=140.857;DPRA=1.54545;EPP=18.2106;EPPR=220.241;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.951923;PAO=0;PQA=0;PQR=0;PRO=0;QA=281;QR=4094;RO=104;RPL=0;RPP=18.2106;RPPR=228.843;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=103;SRP=220.241;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:34:23,4,7:23:906:4,7:160,281:-16.2312,-9.97566,-83.2998,0,-61.3482,-72.4216 0|0:23:19,4,0:19:757:4,0:159,0:-7.76826,0,-61.5316,-13.4878,-62.7357,-75.8263 0|0:19:10,9,0:10:391:9,0:343,0:-25.5034,0,-29.8274,-28.5137,-32.5367,-60.665 0|0:29:24,4,0:24:933:4,0:159,0:-5.88825,0,-75.4791,-13.113,-76.6832,-89.7756 0|0:22:22,0,0:22:870:0,0:0,0:0,-6.62266,-78.6127,-6.62266,-78.6127,-78.6127 0|0:12:6,6,0:6:237:6,0:241,0:-18.4543,0,-18.0908,-20.2605,-19.897,-39.7595 dDocent_Contig_7991 10 . C G 5631.03 . AB=0.275862;ABP=230.79;AC=3;AF=0.25;AN=12;AO=144;CIGAR=1X1M1X2M1X1M;DP=522;DPB=522;DPRA=0;EPP=315.702;EPPR=456.848;GTI=0;LEN=1;MEANALT=3.16667;MQM=59.9792;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.888889;PAIREDR=0.889952;PAO=0;PQA=0;PQR=0;PRO=0;QA=5652;QR=8262;RO=209;RPL=0;RPP=315.702;RPPR=456.848;RPR=144;RUN=1;SAF=144;SAP=315.702;SAR=0;SRF=209;SRP=456.848;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:67:26,12,27,2:26:1026:12,27,2:471,1073,81:-80.5118,-49.6041,-130.411,0,-45.6854,-76.2927,-81.6589,-127.343,-77.7408,-165.477 0|1:96:33,38,24,0:33:1289:38,24,0:1487,945,0:-112.32,0,-94.5203,-44.5149,-28.22,-143.251,-122.254,-105.959,-150.476,-228.215 0|1:75:15,40,15,5:15:596:40,15,5:1577,591,192:-125.231,0,-37.0295,-81.1245,-0.448646,-125.678,-113.991,-33.3154,-114.438,-161.554 0|1:55:21,18,16,0:21:835:18,16,0:694,635,0:-50.6569,0,-63.3311,-4.69857,-16.4753,-68.6378,-56.9786,-68.7497,-73.4543,-125.73 0|0:121:57,20,44,0:57:2257:20,44,0:789,1731,0:-125.227,-77.4663,-257.206,0,-120.842,-172.515,-142.386,-263.227,-185.76,-328.146 0|0:108:57,16,30,0:57:2259:16,30,0:634,1185,0:-80.3533,-45.325,-226.453,0,-133.762,-176.917,-97.512,-231.27,-185.948,-283.455 dDocent_Contig_7992 11 . C G 152.365 . AB=0.131579;ABP=137.413;AC=3;AF=0.25;AN=12;AO=22;CIGAR=1X;DP=232;DPB=232;DPRA=1.73333;EPP=50.7827;EPPR=459.02;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.980952;PAO=0;PQA=0;PQR=0;PRO=0;QA=876;QR=8282;RO=210;RPL=0;RPP=50.7827;RPPR=459.02;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=210;SRP=459.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:17,3:17:686:3:123:-5.44419,0,-56.0464 0/0:40:37,3:37:1478:3:118:0,-1.039,-122.263 0/1:58:51,7:51:1997:7:277:-7.83765,0,-162.456 0/1:36:31,5:31:1217:5:196:-7.17634,0,-98.9611 0/0:54:50,4:50:1956:4:162:0,-1.28866,-161.258 0/0:24:24,0:24:948:0:0:0,-7.22472,-85.6138 dDocent_Contig_7994 14 . G T 1443.15 . AB=0.19084;ABP=329.278;AC=4;AF=0.333333;AN=12;AO=85;CIGAR=1X;DP=597;DPB=597;DPRA=0;EPP=187.585;EPPR=1112.63;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.953033;PAO=0;PQA=0;PQR=0;PRO=0;QA=3391;QR=20281;RO=511;RPL=0;RPP=187.585;RPPR=1112.63;RPR=85;RUN=1;SAF=85;SAP=187.585;SAR=0;SRF=511;SRP=1112.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:91:89,2:89:3530:2:81:0,-19.708,-310.055 0/1:104:88,16:88:3506:16:636:-26.2671,0,-284.273 0/1:57:41,16:41:1662:16:638:-40.5968,0,-132.642 0/0:113:104,8:104:4103:8:326:0,-4.41488,-339.545 0/1:81:71,10:71:2840:10:393:-11.336,0,-231.32 0/1:151:118,33:118:4640:33:1317:-73.3371,0,-372.067 dDocent_Contig_7995 22 . T C 39.0174 . AB=0.096;ABP=180.22;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=363;DPB=363;DPRA=1.07368;EPP=46.4397;EPPR=745.654;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.95;PAIREDR=0.929825;PAO=0;PQA=0;PQR=0;PRO=0;QA=808;QR=13002;RO=342;RPL=0;RPP=46.4397;RPPR=745.654;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=342;SRP=745.654;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:45:40,5:40:1536:5:203:-5.1065,0,-124.962 0/1:80:72,7:72:2734:7:280:-1.38038,0,-222.051 0/0:67:63,4:63:2410:4:163:0,-5.11058,-202.042 0/0:47:45,2:45:1714:2:80:0,-6.55662,-146.925 0/0:57:57,0:57:2155:0:0:0,-17.1587,-194.173 0/0:67:65,2:65:2453:2:82:0,-12.3893,-213.195 dDocent_Contig_7996 27 . C G 84.8588 . AB=0.132075;ABP=65.3275;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=377;DPB=377;DPRA=0.690583;EPP=24.725;EPPR=799.941;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99455;PAO=0;PQA=0;PQR=0;PRO=0;QA=395;QR=14526;RO=367;RPL=0;RPP=24.725;RPPR=799.941;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=367;SRP=799.941;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:53:46,7:46:1805:7:281:-9.70759,0,-146.701 0/0:85:83,2:83:3329:2:73:0,-18.6575,-292.722 0/0:82:82,0:82:3273:0:0:0,-24.6845,-294.624 0/0:83:83,0:83:3270:0:0:0,-24.9855,-294.34 0/0:58:58,0:58:2258:0:0:0,-17.4597,-203.378 0/0:16:15,1:15:591:1:41:0,-0.721913,-49.4292 dDocent_Contig_7997 63 . T A 1310.08 . AB=0.466019;ABP=4.04333;AC=4;AF=0.333333;AN=12;AO=48;CIGAR=1X;DP=397;DPB=397;DPRA=0.17517;EPP=107.241;EPPR=760.854;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.979943;PAO=0;PQA=0;PQR=0;PRO=0;QA=1865;QR=13901;RO=349;RPL=48;RPP=107.241;RPPR=760.854;RPR=0;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=349;SRP=760.854;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:16,9:16:645:9:356:-24.8747,0,-50.8585 0/1:38:23,15:23:900:15:574:-40.5557,0,-69.8643 0/1:16:12,4:12:476:4:155:-9.50699,0,-38.3715 0/1:24:4,20:4:160:20:780:-63.2927,0,-7.55871 0/0:137:137,0:137:5470:0:0:0,-41.2411,-492.137 0/0:157:157,0:157:6250:0:0:0,-47.2617,-562.246 dDocent_Contig_7998 19 . A C 781.332 . AB=0.244755;ABP=83.9318;AC=2;AF=0.166667;AN=12;AO=36;CIGAR=1X;DP=258;DPB=258;DPRA=1.86667;EPP=81.1833;EPPR=485.077;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.972222;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1416;QR=8802;RO=222;RPL=0;RPP=81.1833;RPPR=485.077;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=222;SRP=485.077;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:24,1:24:940:1:41:0,-3.43118,-80.8047 0/0:51:51,0:51:2022:0:0:0,-15.3525,-182.177 0/0:15:15,0:15:610:0:0:0,-4.51545,-55.2372 0/0:24:24,0:24:961:0:0:0,-7.22472,-86.7852 0/1:56:46,10:46:1812:10:390:-18.5952,0,-146.432 0/1:87:62,25:62:2457:25:985:-62.7598,0,-195.093 dDocent_Contig_7999 7 . T G 2688.79 . AB=0.233471;ABP=301.651;AC=5;AF=0.416666;AN=12;AO=113;CIGAR=1M1X4M;DP=484;DPB=481.667;DPRA=0;EPP=248.387;EPPR=537.193;GTI=0;LEN=1;MEANALT=3.33333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3717;QR=9366;RO=246;RPL=0;RPP=248.387;RPPR=537.193;RPR=113;RUN=1;SAF=113;SAP=248.387;SAR=0;SRF=246;SRP=537.193;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:93:33,21,12,23:33:1249:21,12,23:771,378,781:-53.3944,-0.288856,-96.384,-32.9442,-72.3223,-131.737,0,-39.382,-72.0292,-95.4868 0|1:113:52,3,32,22:52:1974:3,32,22:115,1080,758:-71.8576,-78.0698,-239.059,0,-152.459,-152.266,-25.9516,-178.41,-100.351,-181.227 0|1:81:35,1,19,23:35:1326:1,19,23:38,639,734:-48.5697,-55.9878,-164.428,-7.33217,-112.97,-110.368,0,-105.634,-56.9993,-101.827 0|0:114:84,13,13,4:84:3235:13,13,4:475,383,143:-13.5467,0,-261.776,-8.31891,-235.157,-270.05,-27.1706,-254.031,-262.306,-291.635 0|1:18:12,0,0,6:12:454:0,0,6:0,0,207:-13.5463,-17.1587,-54.3979,-17.1587,-54.3979,-54.3979,0,-37.5951,-37.5951,-35.7889 0|1:65:30,0,0,35:30:1128:0,0,35:0,0,1094:-79.1509,-88.1818,-180.625,-88.1818,-180.625,-180.625,0,-92.7897,-92.7897,-82.2537 dDocent_Contig_8000 98 . N A 64.5902 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=68;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_8001 7 . T C 121.307 . AB=0.117647;ABP=175.706;AC=2;AF=0.166667;AN=12;AO=19;CIGAR=1X;DP=480;DPB=480;DPRA=0.863636;EPP=44.2683;EPPR=1001.89;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=58.7152;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.919565;PAO=0;PQA=0;PQR=0;PRO=0;QA=732;QR=17671;RO=460;RPL=0;RPP=44.2683;RPPR=1001.89;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=460;SRP=1001.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:75:68,7:68:2604:7:272:-2.26998,0,-210.103 0/0:94:91,2:91:3509:2:76:0,-21.0943,-308.752 0/0:74:73,1:73:2809:1:39:0,-18.3797,-246.445 0/1:61:52,9:52:1996:9:345:-13.0454,0,-160.578 0/0:78:78,0:78:2981:0:0:0,-23.4803,-261.558 0/0:98:98,0:98:3772:0:0:0,-29.5009,-335.219 dDocent_Contig_8002 15 . T A 176.004 . AB=0.158537;ABP=86.0559;AC=3;AF=0.25;AN=12;AO=17;CIGAR=1X;DP=186;DPB=186;DPRA=0.927273;EPP=39.9253;EPPR=369.989;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.941176;PAIREDR=0.994083;PAO=0;PQA=0;PQR=0;PRO=0;QA=678;QR=6822;RO=169;RPL=0;RPP=39.9253;RPPR=369.989;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=169;SRP=369.989;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:19,6:19:772:6:236:-14.0842,0,-62.2725 0/0:40:37,3:37:1508:3:122:0,-0.668707,-124.583 0/1:28:25,3:25:1004:3:118:-2.57336,0,-82.2261 0/1:29:25,4:25:1004:4:161:-6.14561,0,-81.9276 0/0:31:30,1:30:1205:1:41:0,-5.23736,-104.625 0/0:33:33,0:33:1329:0:0:0,-9.93399,-119.869 dDocent_Contig_8003 7 . T C 49.7614 . AB=0.153846;ABP=30.0702;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=118;DPB=118;DPRA=1.02564;EPP=13.8677;EPPR=248.387;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.743363;PAO=0;PQA=0;PQR=0;PRO=0;QA=194;QR=4324;RO=113;RPL=0;RPP=13.8677;RPPR=248.387;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=113;SRP=248.387;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:13,1:13:494:1:39:0,-0.317855,-40.9094 0/0:14:14,0:14:536:0:0:0,-4.21442,-48.5851 0/0:7:7,0:7:270:0:0:0,-2.10721,-24.6657 0/0:34:34,0:34:1304:0:0:0,-10.235,-117.65 0/1:26:22,4:22:836:4:155:-6.49866,0,-67.7349 0/0:23:23,0:23:884:0:0:0,-6.92369,-79.8775 dDocent_Contig_8004 73 . T A 873.094 . AB=0.278912;ABP=65.4217;AC=3;AF=0.25;AN=12;AO=41;CIGAR=1X;DP=220;DPB=220;DPRA=2.0137;EPP=92.0407;EPPR=391.704;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1492;QR=6990;RO=179;RPL=41;RPP=92.0407;RPPR=391.704;RPR=0;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=179;SRP=391.704;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:957:0:0:0,-7.22472,-86.4305 0/1:42:16,26:16:592:26:950:-73.1711,0,-40.9692 0/1:72:60,12:60:2334:12:430:-17.3578,0,-188.565 0/1:33:30,3:30:1164:3:112:-0.511914,0,-95.1146 0/0:22:22,0:22:876:0:0:0,-6.62266,-79.1527 0/0:27:27,0:27:1067:0:0:0,-8.12781,-96.324 dDocent_Contig_8005 57 . G A 3701.86 . AB=0.50566;ABP=3.08405;AC=6;AF=0.5;AN=12;AO=134;CIGAR=1X;DP=265;DPB=265;DPRA=0;EPP=293.988;EPPR=287.473;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.626866;PAIREDR=0.625954;PAO=0;PQA=0;PQR=0;PRO=0;QA=5103;QR=4972;RO=131;RPL=134;RPP=293.988;RPPR=287.473;RPR=0;RUN=1;SAF=134;SAP=293.988;SAR=0;SRF=131;SRP=287.473;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:24,18:24:895:18:679:-48.7958,0,-68.2132 0/1:54:36,18:36:1377:18:690:-46.175,0,-107.953 0/1:32:20,12:20:777:12:462:-32.2958,0,-60.6212 0/1:42:16,26:16:588:26:1005:-78.1101,0,-40.6009 0/1:47:12,35:12:441:35:1326:-105.477,0,-25.8808 0/1:48:23,25:23:894:25:941:-70.5539,0,-66.3276 dDocent_Contig_8006 13 . C G 381.072 . AB=0.258065;ABP=34.5317;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=355;DPB=355;DPRA=1.05802;EPP=37.7539;EPPR=739.139;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=644;QR=13556;RO=339;RPL=0;RPP=37.7539;RPPR=739.139;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=339;SRP=739.139;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:31,0:31:1246:0:0:0,-9.33193,-112.412 0/0:158:158,0:158:6279:0:0:0,-47.5627,-564.857 0/0:46:46,0:46:1858:0:0:0,-13.8474,-167.422 0/0:23:23,0:23:926:0:0:0,-6.92369,-83.644 0/0:35:35,0:35:1411:0:0:0,-10.536,-127.241 0/1:62:46,16:46:1836:16:644:-39.6301,0,-146.783 dDocent_Contig_8007 78 . G A 252.053 . AB=0.292683;ABP=18.3165;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=153;DPB=153;DPRA=1.32143;EPP=37.7539;EPPR=300.502;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.9375;PAIREDR=0.948905;PAO=0;PQA=0;PQR=0;PRO=0;QA=592;QR=5063;RO=137;RPL=16;RPP=37.7539;RPPR=300.502;RPR=0;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=137;SRP=300.502;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:36,3:36:1286:3:111:0,-1.38625,-105.68 0/1:26:19,7:19:699:7:252:-15.2012,0,-55.4152 0/1:15:10,5:10:369:5:193:-13.2259,0,-29.0375 0/0:31:30,1:30:1156:1:36:0,-5.73365,-100.742 0/0:32:32,0:32:1177:0:0:0,-9.63296,-106.232 0/0:10:10,0:10:376:0:0:0,-3.0103,-34.1897 dDocent_Contig_8008 8 . A G 29326.1 . AB=0.0788804;ABP=1213.74;AC=0;AF=0;AN=12;AO=62;CIGAR=1X2M1X;DP=1751;DPB=1751;DPRA=0;EPP=137.642;EPPR=1501.33;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2395;QR=26750;RO=690;RPL=0;RPP=137.642;RPPR=1501.33;RPR=62;RUN=1;SAF=62;SAP=137.642;SAR=0;SRF=690;SRP=1501.33;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:303:42,0,56,204:42:1622:0,56,204:0,2188,8141:-704.459,-717.102,-850.305,-537.246,-670.448,-653.591,-46.6579,-179.86,0,-118.45 0|0:357:93,0,0,264:93:3605:0,0,264:0,0,10598:-845.628,-873.624,-1169.78,-873.624,-1169.78,-1169.78,0,-296.551,-296.551,-217.079 0|0:190:58,1,0,131:58:2273:1,0,131:40,0,5270:-416.846,-431.01,-617.618,-434.305,-617.919,-621.214,0,-183.609,-186.904,-147.469 0|0:305:82,0,0,223:82:3189:0,0,223:0,0,8931:-711.431,-736.115,-998.179,-736.115,-998.179,-998.179,0,-262.455,-262.455,-195.325 0|0:250:169,31,0,50:169:6560:31,0,50:1197,0,1998:-113.696,-66.2804,-595.938,-164.57,-605.27,-703.564,0,-440.706,-539,-523.948 0|0:346:246,30,0,69:246:9501:30,0,69:1158,0,2743:-151.777,-130.732,-901.971,-225.83,-911.002,-1006.1,0,-685.183,-780.283,-759.512 dDocent_Contig_8009 14 . C T 794.322 . AB=0.5625;ABP=4.6389;AC=3;AF=0.25;AN=12;AO=27;CIGAR=1X;DP=182;DPB=182;DPRA=0.358209;EPP=61.6401;EPPR=339.589;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993548;PAO=0;PQA=0;PQR=0;PRO=0;QA=1089;QR=6227;RO=155;RPL=0;RPP=61.6401;RPPR=339.589;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=155;SRP=339.589;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:8,12:8:315:12:482:-37.7108,0,-22.6923 0/0:3:3,0:3:119:0:0:0,-0.90309,-11.0945 0/1:14:6,8:6:238:8:326:-25.4954,0,-17.5799 0/1:14:7,7:7:286:7:281:-21.4478,0,-21.9004 0/0:61:61,0:61:2451:0:0:0,-18.3628,-220.731 0/0:70:70,0:70:2818:0:0:0,-21.0721,-253.716 dDocent_Contig_8010 36 . A C 75.3922 . AB=0.138462;ABP=76.807;AC=3;AF=0.25;AN=12;AO=11;CIGAR=1X;DP=170;DPB=170;DPRA=1.5;EPP=26.8965;EPPR=348.274;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.818182;PAIREDR=0.654088;PAO=0;PQA=0;PQR=0;PRO=0;QA=426;QR=6197;RO=159;RPL=0;RPP=26.8965;RPPR=348.274;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=159;SRP=348.274;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:17,2:17:679:2:81:-1.96616,0,-55.7206 0/0:20:20,0:20:783:0:0:0,-6.0206,-70.7869 0/1:16:12,4:12:476:4:145:-8.58369,0,-38.3718 0/1:30:27,3:27:1068:3:119:-2.06411,0,-87.3834 0/0:47:46,1:46:1811:1:41:0,-10.0538,-159.107 0/0:38:37,1:37:1380:1:40:0,-7.44346,-120.451 dDocent_Contig_8011 12 . A G 5724.09 . AB=0.629252;ABP=45.6716;AC=2;AF=0.166667;AN=12;AO=197;CIGAR=1X;DP=850;DPB=850;DPRA=1.04088;EPP=430.79;EPPR=1420.98;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993874;PAO=0;PQA=0;PQR=0;PRO=0;QA=7860;QR=25696;RO=653;RPL=0;RPP=430.79;RPPR=1420.98;RPR=197;RUN=1;SAF=197;SAP=430.79;SAR=0;SRF=653;SRP=1420.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:137:137,0:137:5334:0:0:0,-41.2411,-479.938 0/0:219:217,2:217:8518:2:80:0,-58.3338,-758.586 0/0:88:87,1:87:3461:1:41:0,-22.3961,-307.433 0/0:112:103,9:103:4089:9:360:0,-0.953055,-335.235 0/1:157:65,92:65:2580:92:3648:-281.081,0,-185.073 0/1:137:44,93:44:1714:93:3731:-294.55,0,-113.242 dDocent_Contig_8012 18 . C A 8036.32 . AB=0.123188;ABP=173.203;AC=9;AF=0.75;AN=12;AO=20;CIGAR=1X3M;DP=305;DPB=305;DPRA=0.710448;EPP=46.4397;EPPR=72.4974;GTI=0;LEN=1;MEANALT=2.6;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=777;QR=1269;RO=32;RPL=0;RPP=46.4397;RPPR=72.4974;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=32;SRP=72.4974;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:22:8,13,1,0:8:321:13,1,0:518,41,0:-40.2373,0,-22.528,-39.2607,-23.0563,-65.4098,-42.6456,-26.4414,-65.7108,-69.0954 1|1:39:5,28,6,0:5:202:28,6,0:1087,233,0:-90.2739,-2.47412,-10.7052,-72.6365,0,-87.4856,-91.7791,-19.134,-89.2917,-108.434 1|0:39:7,15,7,10:7:264:15,7,10:589,264,406:-58.2063,-11.873,-28.9813,-38.6862,-11.8699,-58.2032,-26.823,0,-26.8199,-45.4389 0|1:38:6,27,3,2:6:240:27,3,2:1074,117,82:-86.6211,0,-11.6436,-78.8115,-10.1582,-97.679,-81.6583,-13.0008,-91.8132,-100.827 1|1:100:6,90,3,0:6:242:90,3,0:3561,122,0:-298.389,-7.14726,0,-290.131,-17.0287,-309.176,-300.195,-27.0927,-310.08,-320.143 1|1:67:0,67,0,0:0:0:67,0,0:2633,0,0:-237.126,-20.169,0,-237.126,-20.169,-237.126,-237.126,-20.169,-237.126,-237.126 dDocent_Contig_8014 152 . G A 2342.68 . AB=0.222603;ABP=198.175;AC=6;AF=0.5;AN=12;AO=93;CIGAR=1X;DP=332;DPB=332;DPRA=5.83636;EPP=204.957;EPPR=521.992;GTI=0;LEN=1;MEANALT=1;MQM=58.7634;MQMR=59.6736;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995816;PAO=0;PQA=0;PQR=0;PRO=0;QA=3713;QR=9543;RO=239;RPL=0;RPP=204.957;RPPR=521.992;RPR=93;RUN=1;SAF=0;SAP=204.957;SAR=93;SRF=0;SRP=521.992;SRR=239;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:77:66,11:66:2628:11:410:-14.051,0,-213.39 0/1:111:82,29:82:3249:29:1170:-71.7374,0,-258.862 0/1:76:56,20:56:2252:20:813:-48.759,0,-179.957 0/1:28:23,5:23:925:5:202:-10.133,0,-75.1204 0/0:11:11,0:11:448:0:0:0,-3.31133,-38.7687 1/1:29:1,28:1:41:28:1118:-96.8093,-4.6353,0 dDocent_Contig_8015 30 . A G 179.085 . AB=0.333333;ABP=8.07707;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=386;DPB=386;DPRA=1.21667;EPP=22.5536;EPPR=821.655;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=360;QR=14784;RO=377;RPL=0;RPP=22.5536;RPPR=821.655;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=377;SRP=821.655;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:972:0:0:0,-7.52575,-87.7791 0/0:51:51,0:51:1986:0:0:0,-15.3525,-178.947 0/0:31:31,0:31:1202:0:0:0,-9.33193,-108.456 0/1:21:14,7:14:557:7:282:-19.4313,0,-44.1495 0/0:133:133,0:133:5237:0:0:0,-40.037,-471.222 0/0:125:123,2:123:4830:2:78:0,-30.2254,-427.232 dDocent_Contig_8016 7 . T A 2270.86 . AB=0.35743;ABP=46.9717;AC=2;AF=0.166667;AN=12;AO=90;CIGAR=1X;DP=600;DPB=600;DPRA=1.3622;EPP=198.443;EPPR=1106.12;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.988889;PAIREDR=0.976378;PAO=0;PQA=0;PQR=0;PRO=0;QA=3425;QR=19410;RO=508;RPL=0;RPP=198.443;RPPR=1106.12;RPR=90;RUN=1;SAF=90;SAP=198.443;SAR=0;SRF=508;SRP=1106.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:61:61,0:61:2336:0:0:0,-18.3628,-210.452 0/0:97:95,1:95:3623:1:39:0,-25.2471,-322.439 0/0:126:125,0:125:4771:0:0:0,-37.6287,-429.324 0/0:67:67,0:67:2578:0:0:0,-20.169,-232.216 0/1:146:71,75:71:2713:75:2852:-212.91,0,-200.407 0/1:103:89,14:89:3389:14:534:-17.3973,0,-274.142 dDocent_Contig_8017 26 . T A 3316.39 . AB=0.38535;ABP=38.8603;AC=4;AF=0.333333;AN=12;AO=122;CIGAR=1X;DP=656;DPB=656;DPRA=0.452736;EPP=267.93;EPPR=1162.58;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998127;PAO=0;PQA=0;PQR=0;PRO=0;QA=4837;QR=21296;RO=534;RPL=0;RPP=267.93;RPPR=1162.58;RPR=122;RUN=1;SAF=122;SAP=267.93;SAR=0;SRF=534;SRP=1162.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:121:67,54:67:2660:54:2108:-153.482,0,-203.11 0/1:71:37,34:37:1439:34:1361:-101.38,0,-108.388 0/1:20:18,2:18:724:2:80:-1.57098,0,-59.4653 0/1:102:71,31:71:2863:31:1249:-81.9735,0,-227.065 0/0:201:201,0:201:8009:0:0:0,-60.507,-720.402 0/0:141:140,1:140:5601:1:39:0,-38.5487,-500.018 dDocent_Contig_8018 36 . G A 1231.58 . AB=0.315789;ABP=47.8112;AC=2;AF=0.166667;AN=12;AO=52;CIGAR=1X;DP=440;DPB=440;DPRA=0.921397;EPP=115.927;EPPR=845.542;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997423;PAO=0;PQA=0;PQR=0;PRO=0;QA=2059;QR=15441;RO=388;RPL=0;RPP=115.927;RPPR=845.542;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=388;SRP=845.542;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1621:0:0:0,-12.3422,-146.126 0/0:76:76,0:76:3007:0:0:0,-22.8783,-270.732 0/0:112:112,0:112:4469:0:0:0,-33.7154,-402.139 0/0:59:55,4:55:2202:4:153:0,-3.62192,-184.209 0/1:90:50,40:50:2029:40:1592:-116.42,0,-155.694 0/1:62:54,8:54:2113:8:314:-9.95965,0,-171.681 dDocent_Contig_8020 98 . N C 3743.33 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=122;CIGAR=8X;DP=122;DPB=122.125;DPRA=0;EPP=267.93;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=1;PQA=35;PQR=0;PRO=0;QA=4137;QR=0;RO=0;RPL=122;RPP=267.93;RPPR=0;RPR=0;RUN=1;SAF=122;SAP=267.93;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:31:0,31:0:0:31:1040:-93.9061,-9.33193,0 1|1:39:0,39:0:0:39:1320:-119.099,-11.7402,0 1|1:21:0,21:0:0:21:716:-64.7583,-6.32163,0 1|1:27:0,27:0:0:27:924:-83.1236,-8.12781,0 .:.:.:.:.:.:.:. 1|1:4:0,4:0:0:4:137:-12.6682,-1.20412,0 dDocent_Contig_8022 10 . C T 305.548 . AB=0.131579;ABP=47.8112;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=2M1X2M;DP=264;DPB=261;DPRA=1.37629;EPP=16.0391;EPPR=508.963;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.995708;PAO=0;PQA=0;PQR=0;PRO=0;QA=241;QR=9028;RO=233;RPL=0;RPP=16.0391;RPPR=508.963;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=233;SRP=508.963;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:51:46,0,1,4:46:1786:0,1,4:0,41,160:0,-13.8474,-160.584,-10.4613,-157.199,-156.898,-0.675174,-147.403,-144.018,-146.198 0|0:78:62,15,0,0:62:2383:15,0,0:551,0,0:-26.3358,0,-191.086,-44.9996,-195.602,-240.638,-44.9996,-195.602,-240.638,-240.638 0|1:38:30,0,5,3:30:1158:0,5,3:0,200,121:-7.44076,-16.4717,-111.556,0,-95.0808,-93.5757,-6.49616,-101.581,-85.105,-100.678 0|0:46:44,0,0,0:44:1706:0,0,0:0,0,0:0,-13.2453,-153.383,-13.2453,-153.383,-153.383,-13.2453,-153.383,-153.383,-153.383 0|0:30:30,0,0,0:30:1167:0,0,0:0,0,0:0,-9.0309,-105.324,-9.0309,-105.324,-105.324,-9.0309,-105.324,-105.324,-105.324 0|0:21:21,0,0,0:21:828:0,0,0:0,0,0:0,-6.32163,-74.8408,-6.32163,-74.8408,-74.8408,-6.32163,-74.8408,-74.8408,-74.8408 dDocent_Contig_8023 68 . G A 1440.68 . AB=0.424658;ABP=10.2089;AC=1;AF=0.0833333;AN=12;AO=63;CIGAR=1X;DP=1134;DPB=1134;DPRA=0.845671;EPP=139.813;EPPR=2326.49;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995327;PAO=0;PQA=0;PQR=0;PRO=0;QA=2138;QR=36135;RO=1070;RPL=63;RPP=139.813;RPPR=2326.49;RPR=0;RUN=1;SAF=63;SAP=139.813;SAR=0;SRF=1070;SRP=2326.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:256:256,0:256:8653:0:0:0,-77.0637,-778.837 0/0:377:376,0:376:12693:0:0:0,-113.187,-1141.96 0/0:158:158,0:158:5286:0:0:0,-47.5627,-475.906 0/0:191:190,1:190:6397:1:35:0,-53.9981,-572.37 0/0:6:6,0:6:209:0:0:0,-1.80618,-19.1511 0/1:146:84,62:84:2897:62:2103:-145.591,0,-217.029 dDocent_Contig_8024 51 . T A 595.726 . AB=0.178571;ABP=178.9;AC=3;AF=0.25;AN=12;AO=35;CIGAR=1X;DP=377;DPB=377;DPRA=1.08287;EPP=79.0118;EPPR=745.654;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.942857;PAIREDR=0.883041;PAO=0;PQA=0;PQR=0;PRO=0;QA=1364;QR=13579;RO=342;RPL=35;RPP=79.0118;RPPR=745.654;RPR=0;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=342;SRP=745.654;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:34,8:34:1360:8:310:-15.6178,0,-110.017 0/1:86:70,16:70:2812:16:637:-31.7756,0,-227.294 0/0:64:64,0:64:2563:0:0:0,-19.2659,-230.804 0/1:68:57,11:57:2228:11:417:-17.401,0,-180.224 0/0:58:58,0:58:2304:0:0:0,-17.4597,-207.525 0/0:59:59,0:59:2312:0:0:0,-17.7608,-208.238 dDocent_Contig_8025 36 . A G 140.161 . AB=0.233333;ABP=21.5402;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=200;DPB=200;DPRA=0.882353;EPP=18.2106;EPPR=422.104;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.777202;PAO=0;PQA=0;PQR=0;PRO=0;QA=269;QR=7621;RO=193;RPL=0;RPP=18.2106;RPPR=422.104;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=193;SRP=422.104;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:550:0:0:0,-4.21442,-49.841 0/0:41:41,0:41:1642:0:0:0,-12.3422,-148.007 0/0:36:36,0:36:1448:0:0:0,-10.8371,-130.567 0/0:65:65,0:65:2527:0:0:0,-19.5669,-227.564 0/0:14:14,0:14:550:0:0:0,-4.21442,-49.8386 0/1:30:23,7:23:904:7:269:-15.5389,0,-72.6278 dDocent_Contig_8026 46 . C G 478.938 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=338;DPB=338;DPRA=0.541353;EPP=33.4109;EPPR=704.396;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=8.67362e-19;PAIRED=0.928571;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=563;QR=12787;RO=323;RPL=0;RPP=33.4109;RPPR=704.396;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=323;SRP=704.396;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:58,1:58:2285:1:40:0,-13.7651,-201.817 0/0:110:110,0:110:4353:0:0:0,-33.1133,-391.732 0/0:58:58,0:58:2299:0:0:0,-17.4597,-207.077 0/0:76:75,0:75:2969:0:0:0,-22.5772,-267.208 1/1:13:0,13:0:0:13:523:-47.4166,-3.91339,0 0/0:22:22,0:22:881:0:0:0,-6.62266,-79.5984 dDocent_Contig_8027 8 . A T 1309.08 . AB=0.295337;ABP=73.2287;AC=4;AF=0.333333;AN=12;AO=64;CIGAR=1X;DP=325;DPB=325;DPRA=0;EPP=141.985;EPPR=569.765;GTI=0;LEN=1;MEANALT=1;MQM=53.3906;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.234375;PAIREDR=0.48659;PAO=0;PQA=0;PQR=0;PRO=0;QA=2441;QR=9937;RO=261;RPL=0;RPP=141.985;RPPR=569.765;RPR=64;RUN=1;SAF=64;SAP=141.985;SAR=0;SRF=261;SRP=569.765;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:58:55,3:55:2107:3:115:0,-6.75644,-179.157 0/0:74:70,4:70:2692:4:152:0,-8.29991,-228.49 0/1:35:31,4:31:1163:4:144:-2.73142,0,-94.4319 0/1:45:24,21:24:921:21:802:-58.6271,0,-69.6611 0/1:54:45,9:45:1694:9:347:-15.2704,0,-136.466 0/1:59:36,23:36:1360:23:881:-61.4879,0,-104.917 dDocent_Contig_8028 25 . T C 702.744 . AB=0.280374;ABP=47.84;AC=2;AF=0.166667;AN=12;AO=31;CIGAR=1X;DP=281;DPB=281;DPRA=1.17829;EPP=70.3259;EPPR=545.878;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1207;QR=9905;RO=250;RPL=0;RPP=70.3259;RPPR=545.878;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=250;SRP=545.878;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:36,0:36:1432:0:0:0,-10.8371,-129.134 0/0:60:60,0:60:2391:0:0:0,-18.0618,-215.34 0/0:45:44,1:44:1753:1:40:0,-9.55067,-153.986 0/0:33:33,0:33:1286:0:0:0,-9.93399,-116.001 0/1:44:20,24:20:795:24:923:-70.1194,0,-58.6199 0/1:63:57,6:57:2248:6:244:-3.37373,0,-183.516 dDocent_Contig_8029 7 . T A 1081.14 . AB=0.373913;ABP=18.8904;AC=4;AF=0.333333;AN=12;AO=43;CIGAR=1X2M2X;DP=175;DPB=175;DPRA=0.958333;EPP=96.3836;EPPR=289.645;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.55814;PAIREDR=0.469697;PAO=0;PQA=0;PQR=0;PRO=0;QA=1650;QR=5067;RO=132;RPL=0;RPP=96.3836;RPPR=289.645;RPR=43;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=132;SRP=289.645;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:34:17,17:17:652:17:658:-49.3223,0,-48.7808 0|1:35:21,14:21:809:14:528:-37.3241,0,-62.5983 0|1:17:15,2:15:580:2:78:-2.28596,0,-47.4253 0|1:29:19,10:19:728:10:386:-26.3671,0,-57.1213 0|0:33:33,0:33:1255:0:0:0,-9.93399,-113.241 0|0:27:27,0:27:1043:0:0:0,-8.12781,-94.178 dDocent_Contig_8030 13 . T C 73.3424 . AB=0.119048;ABP=108.895;AC=3;AF=0.25;AN=12;AO=12;CIGAR=1X;DP=174;DPB=174;DPRA=0.823529;EPP=29.068;EPPR=354.789;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.709877;PAO=0;PQA=0;PQR=0;PRO=0;QA=480;QR=6511;RO=162;RPL=0;RPP=29.068;RPPR=354.789;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=162;SRP=354.789;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:29,5:29:1151:5:194:-7.59419,0,-93.6349 0/0:28:27,1:27:1079:1:41:0,-4.33427,-93.3007 0/1:28:25,3:25:1019:3:122:-2.94365,0,-83.5714 0/0:34:34,0:34:1363:0:0:0,-10.235,-122.926 0/0:28:27,1:27:1088:1:41:0,-4.33427,-94.1106 0/1:22:20,2:20:811:2:82:-1.15702,0,-66.683 dDocent_Contig_8031 109 . A T 78.637 . AB=0.135802;ABP=96.33;AC=1;AF=0.0833333;AN=12;AO=29;CIGAR=1X;DP=427;DPB=427;DPRA=1.37281;EPP=65.983;EPPR=860.742;GTI=0;LEN=1;MEANALT=1.5;MQM=40;MQMR=40;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1010;QR=13481;RO=395;RPL=0;RPP=65.983;RPPR=860.742;RPR=29;RUN=1;SAF=0;SAP=65.983;SAR=29;SRF=0;SRP=860.742;SRR=395;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:63:60,3:60:1994:3:104:0,-9.57171,-164.933 0/0:77:68,7:68:2310:7:242:0,-1.49537,-180.218 0/1:81:69,11:69:2354:11:385:-9.38655,0,-180.963 0/0:92:84,8:84:2900:8:279:0,-3.0868,-228.31 0/0:56:56,0:56:1909:0:0:0,-16.8577,-166.877 0/0:58:58,0:58:2014:0:0:0,-17.4597,-175.631 dDocent_Contig_8033 104 . N G 931.6 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=30;CIGAR=3X;DP=30;DPB=30;DPRA=0;EPP=68.1545;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1008;QR=0;RO=0;RPL=0;RPP=68.1545;RPPR=0;RPR=30;RUN=1;SAF=0;SAP=68.1545;SAR=30;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 .:.:.:.:.:.:.:. 1|1:4:0,4:0:0:4:133:-12.299,-1.20412,0 1|1:6:0,6:0:0:6:208:-19.0596,-1.80618,0 1|1:6:0,6:0:0:6:206:-18.8768,-1.80618,0 1|1:13:0,13:0:0:13:427:-38.7471,-3.91339,0 dDocent_Contig_8034 11 . A T 886.106 . AB=0.462687;ABP=3.82055;AC=2;AF=0.166667;AN=12;AO=35;CIGAR=1X;DP=189;DPB=189;DPRA=1.48684;EPP=48.239;EPPR=337.417;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.6;PAIREDR=0.850649;PAO=0;PQA=0;PQR=0;PRO=0;QA=1377;QR=6115;RO=154;RPL=0;RPP=79.0118;RPPR=337.417;RPR=35;RUN=1;SAF=31;SAP=48.239;SAR=4;SRF=154;SRP=337.417;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:8:8,0:8:323:0:0:0,-2.40824,-29.4386 0/1:41:22,19:22:855:19:753:-55.7487,0,-64.9195 0/1:26:14,12:14:555:12:484:-36.0837,0,-42.4619 0/0:33:33,0:33:1308:0:0:0,-9.93399,-117.987 0/0:46:42,4:42:1664:4:140:0,-0.904774,-137.043 0/0:35:35,0:35:1410:0:0:0,-10.536,-127.151 dDocent_Contig_8035 13 . A C 116.237 . AB=0.133333;ABP=90.593;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=231;DPB=231;DPRA=2.40385;EPP=24.725;EPPR=482.906;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.5249;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.914027;PAO=0;PQA=0;PQR=0;PRO=0;QA=393;QR=8720;RO=221;RPL=0;RPP=24.725;RPPR=482.906;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=221;SRP=482.906;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:34,0:34:1321:0:0:0,-10.235,-119.154 0/0:21:21,0:21:837:0:0:0,-6.32163,-75.6435 0/0:56:56,0:56:2209:0:0:0,-16.8577,-198.994 0/0:17:17,0:17:672:0:0:0,-5.11751,-60.3136 0/1:75:65,10:65:2573:10:393:-13.1466,0,-209.086 0/0:28:28,0:28:1108:0:0:0,-8.42884,-99.5352 dDocent_Contig_8036 15 . T C 3627.12 . AB=0.0470588;ABP=305.943;AC=0;AF=0;AN=12;AO=8;CIGAR=1X1M1X2M2X;DP=321;DPB=321;DPRA=0;EPP=20.3821;EPPR=380.846;GTI=0;LEN=1;MEANALT=2.66667;MQM=26.875;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=301;QR=6880;RO=174;RPL=0;RPP=20.3821;RPPR=380.846;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=174;SRP=380.846;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:36:19,1,1,15:19:731:1,1,15:33,36,592:-43.0657,-46.8255,-106.526,-45.8494,-103.89,-105.553,0,-58.1148,-57.1401,-55.5612 0|0:60:30,1,0,29:30:1184:1,0,29:36,0,1162:-86.78,-93.3036,-190.416,-95.8109,-190.717,-193.226,0,-94.9883,-97.4959,-88.7661 0|0:74:35,6,6,27:35:1391:6,6,27:232,238,1071:-77.6677,-76.1261,-188.835,-68.6085,-171.05,-181.33,0,-102.486,-94.9729,-106.439 0|0:47:17,0,3,27:17:680:0,3,27:0,120,1079:-83.7467,-88.8643,-144.878,-78.9792,-134.993,-134.09,0,-56.0133,-46.1282,-47.8855 0|0:54:39,0,0,15:39:1545:0,0,15:0,0,612:-39.1615,-50.9017,-178.059,-50.9017,-178.059,-178.059,0,-127.561,-127.561,-123.046 0|0:50:34,0,0,16:34:1349:0,0,16:0,0,647:-43.5118,-53.7468,-164.789,-53.7468,-164.789,-164.789,0,-111.443,-111.443,-106.627 dDocent_Contig_8037 23 . A T 289.487 . AB=0.104623;ABP=561.068;AC=3;AF=0.25;AN=12;AO=57;CIGAR=2M1I6M1X1M;DP=782;DPB=790.9;DPRA=1.30385;EPP=39.6206;EPPR=1117.45;GTI=0;LEN=1;MEANALT=3.2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.175439;PAIREDR=0.831818;PAO=0;PQA=0;PQR=0;PRO=0;QA=2155;QR=25684;RO=660;RPL=0;RPP=126.784;RPPR=1436.18;RPR=57;RUN=1;SAF=44;SAP=39.6206;SAR=13;SRF=621;SRP=1117.45;SRR=39;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:199:183,7,9,0:183:7138:7,9,0:245,345,0:0,-35.1747,-619.779,-26.7561,-593.573,-610.791,-55.0885,-621.886,-613.5,-641.813 0|1:244:196,8,25,3:196:7691:8,25,3:280,914,123:-15.6591,-51.8905,-681.995,0,-609.735,-624.984,-64.5064,-674.251,-622.357,-696.122 0|0:104:92,7,0,4:92:3601:7,0,4:274,0,161:0,-5.17327,-299.13,-27.6948,-301.237,-323.766,-14.4227,-287.967,-310.496,-309.292 0|1:110:84,1,13,9:84:3250:1,13,9:33,508,342:-16.4886,-39.1088,-305.755,0,-264.294,-263.048,-13.7383,-278.021,-238.927,-277.98 0|1:57:48,4,5,0:48:1813:4,5,0:139,194,0:-1.50872,-4.6764,-152.051,0,-137.319,-147.111,-15.9582,-153.256,-148.616,-164.553 0|0:68:57,5,5,0:57:2191:5,5,0:196,194,0:0,-1.04229,-179.386,-1.22533,-164.955,-179.566,-17.1587,-180.891,-181.071,-197.007 dDocent_Contig_8038 26 . C T 35.7113 . AB=0.121951;ABP=53.9075;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=160;DPB=160;DPRA=1.8;EPP=24.725;EPPR=328.731;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.6;PAIREDR=0.613333;PAO=0;PQA=0;PQR=0;PRO=0;QA=393;QR=5857;RO=150;RPL=0;RPP=24.725;RPPR=328.731;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=150;SRP=328.731;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:31,2:31:1180:2:76:0,-2.71973,-99.2748 0/0:37:35,2:35:1372:2:80:0,-3.54653,-116.159 0/1:31:27,4:27:1054:4:156:-5.08519,0,-85.8177 0/0:33:32,1:32:1261:1:40:0,-5.93831,-109.772 0/1:10:9,1:9:357:1:41:-1.08427,0,-29.4824 0/0:16:16,0:16:633:0:0:0,-4.81648,-57.3078 dDocent_Contig_8039 117 . C G 38.2627 . AB=0.105263;ABP=28.7251;AC=0;AF=0;AN=12;AO=3;CIGAR=4M1X5M;DP=212;DPB=206.4;DPRA=0.683544;EPP=9.52472;EPPR=430.79;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0;PAIREDR=0.700508;PAO=0;PQA=0;PQR=0;PRO=0;QA=102;QR=7048;RO=197;RPL=3;RPP=9.52472;RPPR=430.79;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=430.79;SRR=197;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:41:41,0,0,0,0:41:1463:0,0,0,0:0,0,0,0:0,-12.3422,-131.957,-12.3422,-131.957,-131.957,-12.3422,-131.957,-131.957,-131.957,-12.3422,-131.957,-131.957,-131.957,-131.957 0|0:35:30,1,3,1,0:30:1047:1,3,1,0:31,109,33,0:0,-8.94357,-93.7924,-0.0274388,-85.1925,-84.4284,-6.35368,-91.4258,-82.6636,-91.2642,-9.0309,-94.0934,-85.3315,-91.5653,-94.2331 0|0:19:12,5,0,2,0:12:446:5,0,2,0:163,0,69,0:-5.34837,0,-35.0199,-8.96073,-36.5251,-45.5297,-3.32342,-30.9231,-39.9225,-39.3205,-8.96073,-36.5251,-45.5297,-39.9225,-45.5297 0|0:20:20,0,0,0,0:20:714:0,0,0,0:0,0,0,0:0,-6.0206,-64.5848,-6.0206,-64.5848,-64.5848,-6.0206,-64.5848,-64.5848,-64.5848,-6.0206,-64.5848,-64.5848,-64.5848,-64.5848 0|0:37:35,0,0,0,2:35:1267:0,0,0,2:0,0,0,42:0,-10.536,-114.11,-10.536,-114.11,-114.11,-10.536,-114.11,-114.11,-114.11,-7.14915,-110.941,-110.941,-110.941,-110.339 0|0:60:59,1,0,0,0:59:2111:1,0,0,0:30,0,0,0:0,-15.7588,-187.946,-17.7608,-188.247,-190.016,-17.7608,-188.247,-190.016,-190.016,-17.7608,-188.247,-190.016,-190.016,-190.016 dDocent_Contig_8040 15 . G A 2903.41 . AB=0.335312;ABP=82.4011;AC=3;AF=0.25;AN=12;AO=120;CIGAR=1X;DP=546;DPB=546;DPRA=0;EPP=263.587;EPPR=928.058;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8239;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.95;PAIREDR=0.828638;PAO=0;PQA=0;PQR=0;PRO=0;QA=4667;QR=16917;RO=426;RPL=0;RPP=263.587;RPPR=928.058;RPR=120;RUN=1;SAF=120;SAP=263.587;SAR=0;SRF=426;SRP=928.058;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:61:58,3:58:2279:3:119:0,-7.26765,-194.174 0/1:109:99,10:99:3926:10:382:-1.9178,0,-320.527 0/0:60:59,1:59:2363:1:33:0,-14.7627,-209.484 0/0:88:85,3:85:3381:3:114:0,-15.8587,-293.71 0/1:108:70,38:70:2779:38:1477:-100.68,0,-216.311 0/1:120:55,65:55:2189:65:2542:-192.826,0,-161.052 dDocent_Contig_8041 141 . A T 116.583 . AB=0.333333;ABP=7.35324;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=112;DPB=112;DPRA=1.19608;EPP=20.3821;EPPR=228.843;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.865385;PAO=0;PQA=0;PQR=0;PRO=0;QA=277;QR=3698;RO=104;RPL=0;RPP=20.3821;RPPR=228.843;RPR=8;RUN=1;SAF=0;SAP=20.3821;SAR=8;SRF=0;SRP=228.843;SRR=104;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:24,1:24:826:1:37:0,-3.82792,-70.9473 0/1:18:12,6:12:414:6:203:-13.1808,0,-32.1669 0/0:29:29,0:29:1036:0:0:0,-8.72987,-93.5482 0/0:21:21,0:21:762:0:0:0,-6.32163,-68.906 0/0:18:17,1:17:623:1:37:0,-1.72071,-52.7074 0/0:1:1,0:1:37:0:0:0,-0.30103,-3.69783 dDocent_Contig_8042 56 . G A 87.6858 . AB=0.363636;ABP=4.78696;AC=1;AF=0.1;AN=10;AO=4;CIGAR=1X;DP=50;DPB=50;DPRA=1.12821;EPP=11.6962;EPPR=102.898;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=148;QR=1835;RO=46;RPL=4;RPP=11.6962;RPPR=102.898;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=46;SRP=102.898;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:400:0:0:0,-3.0103,-36.3586 0/1:11:7,4:7:286:4:148:-10.3706,0,-22.8035 0/0:10:10,0:10:400:0:0:0,-3.0103,-36.3575 0/0:10:10,0:10:388:0:0:0,-3.0103,-35.2724 ./.:.:.:.:.:.:.:. 0/0:9:9,0:9:361:0:0:0,-2.70927,-32.853 dDocent_Contig_8043 24 . T G 286.807 . AB=0.120968;ABP=312.48;AC=4;AF=0.333333;AN=12;AO=30;CIGAR=1X;DP=362;DPB=362;DPRA=1.08772;EPP=68.1545;EPPR=723.939;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9548;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.933735;PAO=0;PQA=0;PQR=0;PRO=0;QA=1212;QR=13265;RO=332;RPL=0;RPP=68.1545;RPPR=723.939;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=332;SRP=723.939;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:62:55,7:55:2163:7:278:-6.72285,0,-176.159 0/1:51:45,6:45:1796:6:242:-6.80479,0,-146.503 0/1:95:85,10:85:3386:10:408:-8.48274,0,-276.172 0/0:68:68,0:68:2750:0:0:0,-20.47,-247.599 0/0:46:46,0:46:1860:0:0:0,-13.8474,-167.599 0/1:40:33,7:33:1310:7:284:-13.8922,0,-106.121 dDocent_Contig_8044 45 . G A 3303.04 . AB=0.574359;ABP=12.3755;AC=6;AF=0.5;AN=12;AO=112;CIGAR=1X;DP=195;DPB=195;DPRA=0;EPP=246.215;EPPR=181.071;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.428571;PAIREDR=0.695122;PAO=0;PQA=0;PQR=0;PRO=0;QA=4424;QR=3229;RO=82;RPL=0;RPP=246.215;RPPR=181.071;RPR=112;RUN=1;SAF=112;SAP=246.215;SAR=0;SRF=82;SRP=181.071;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:21,21:21:834:21:812:-60.7425,0,-62.7302 0/1:47:13,33:13:518:33:1303:-103.527,0,-32.9525 0/1:16:5,11:5:199:11:435:-34.6878,0,-13.4719 0/1:25:8,17:8:300:17:688:-54.7232,0,-19.82 0/1:31:15,16:15:588:16:641:-48.6938,0,-43.9219 0/1:34:20,14:20:790:14:545:-39.1515,0,-61.1816 dDocent_Contig_8045 11 . C T 1093.51 . AB=0.141115;ABP=645.161;AC=5;AF=0.416667;AN=12;AO=83;CIGAR=1X;DP=674;DPB=674;DPRA=0;EPP=183.243;EPPR=1286.35;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993232;PAO=0;PQA=0;PQR=0;PRO=0;QA=3301;QR=23399;RO=591;RPL=0;RPP=183.243;RPPR=1286.35;RPR=83;RUN=1;SAF=83;SAP=183.243;SAR=0;SRF=591;SRP=1286.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:124:109,15:109:4313:15:593:-16.3783,0,-350.824 0/1:126:106,20:106:4228:20:790:-33.4819,0,-342.559 0/1:103:91,12:91:3569:12:476:-12.1846,0,-290.241 0/0:100:98,2:98:3880:2:82:0,-22.3233,-341.424 0/1:109:89,20:89:3546:20:807:-40.1325,0,-286.368 0/1:112:98,14:98:3863:14:553:-16.3956,0,-313.984 dDocent_Contig_8046 8 . A T 283.52 . AB=0.144737;ABP=169.642;AC=3;AF=0.25;AN=12;AO=23;CIGAR=1X;DP=284;DPB=284;DPRA=0.994737;EPP=52.9542;EPPR=569.765;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=889;QR=9976;RO=261;RPL=0;RPP=52.9542;RPPR=569.765;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=261;SRP=569.765;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:49:37,12:37:1405:12:461:-27.0899,0,-111.981 0/1:56:50,6:50:1910:6:233:-4.4824,0,-155.29 0/0:37:36,1:36:1380:1:39:0,-7.24155,-120.585 0/0:81:81,0:81:3084:0:0:0,-24.3834,-277.716 0/0:14:14,0:14:546:0:0:0,-4.21442,-49.4864 0/1:47:43,4:43:1651:4:156:-0.268879,0,-134.706 dDocent_Contig_8047 20 . T A 363.601 . AB=0.120915;ABP=384.962;AC=6;AF=0.5;AN=12;AO=37;CIGAR=1X;DP=306;DPB=306;DPRA=0;EPP=83.3548;EPPR=587.136;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.972973;PAIREDR=0.992565;PAO=0;PQA=0;PQR=0;PRO=0;QA=1502;QR=10905;RO=269;RPL=0;RPP=83.3548;RPPR=587.136;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=269;SRP=587.136;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:26,4:26:1043:4:163:-6.02753,0,-85.1291 0/1:36:33,3:33:1341:3:118:-0.165124,0,-110.107 0/1:33:26,7:26:1048:7:285:-16.0904,0,-84.6742 0/1:29:23,6:23:926:6:246:-13.7902,0,-74.9124 0/1:105:96,9:96:3908:9:365:-1.60633,0,-320.075 0/1:73:65,8:65:2639:8:325:-7.64444,0,-215.646 dDocent_Contig_8048 8 . A G 15417.8 . AB=0.670543;ABP=198.544;AC=6;AF=0.5;AN=12;AO=519;CIGAR=1X;DP=774;DPB=774;DPRA=0;EPP=1130;EPPR=556.736;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.930636;PAIREDR=0.976471;PAO=0;PQA=0;PQR=0;PRO=0;QA=19835;QR=9715;RO=255;RPL=0;RPP=1130;RPPR=556.736;RPR=519;RUN=1;SAF=519;SAP=1130;SAR=0;SRF=255;SRP=556.736;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:159:75,84:75:2856:84:3215:-241.636,0,-209.352 0/1:149:58,91:58:2222:91:3485:-268.921,0,-155.347 0/1:206:54,152:54:2059:152:5827:-462.37,0,-123.533 0/1:109:27,82:27:1013:82:3103:-246.616,0,-58.6667 0/1:90:28,62:28:1070:62:2357:-185.25,0,-69.5148 0/1:61:13,48:13:495:48:1848:-148.205,0,-26.5334 dDocent_Contig_8049 10 . T C 2998.96 . AB=0.206391;ABP=1127.67;AC=5;AF=0.416667;AN=12;AO=366;CIGAR=1X3M1X2M;DP=1897;DPB=1897;DPRA=0;EPP=797.769;EPPR=3110.39;GTI=0;LEN=1;MEANALT=4.83333;MQM=30.1175;MQMR=58.6848;NS=6;NUMALT=2;ODDS=0;PAIRED=0.964481;PAIREDR=0.816212;PAO=0;PQA=0;PQR=0;PRO=0;QA=10318;QR=56795;RO=1431;RPL=0;RPP=797.769;RPPR=3110.39;RPR=366;RUN=1;SAF=366;SAP=797.769;SAR=0;SRF=1431;SRP=3110.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:395:322,10,56:322:12755:10,56:391,1383:0,-65.1866,-1108.01,-3.16516,-1017.16,-1032.03 0|1:441:327,7,90:327:13031:7,90:280,2602:-87.8506,-163.404,-1229.94,0,-1045.69,-1041.48 0|1:443:323,12,86:323:12838:12,86:474,2393:-73.3884,-132.084,-1166.98,0,-999.903,-1012.54 0|1:421:322,5,81:322:12760:5,81:200,2289:-64.9518,-145.561,-1180.43,0,-1019.97,-1011.9 0|1:97:63,5,29:63:2484:5,29:188,817:-40.9694,-44.6135,-247.384,0,-188.902,-195.475 0|1:100:74,0,24:74:2927:0,24:0,834:-41.9574,-64.2336,-305.153,0,-240.863,-233.638 dDocent_Contig_8050 10 . T C 288.944 . AB=0.145695;ABP=167.654;AC=3;AF=0.25;AN=12;AO=23;CIGAR=1X;DP=270;DPB=270;DPRA=0.891753;EPP=52.9542;EPPR=537.193;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.478261;PAIREDR=0.463415;PAO=0;PQA=0;PQR=0;PRO=0;QA=907;QR=9602;RO=246;RPL=0;RPP=52.9542;RPPR=537.193;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=246;SRP=537.193;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:48:41,7:41:1617:7:276:-10.759,0,-131.326 0/1:49:39,10:39:1512:10:397:-21.3357,0,-121.58 0/0:22:21,1:21:840:1:41:0,-2.52809,-71.8181 0/1:54:49,5:49:1890:5:193:-1.48426,0,-154.077 0/0:44:43,0:43:1679:0:0:0,-12.9443,-150.946 0/0:53:53,0:53:2064:0:0:0,-15.9546,-185.966 dDocent_Contig_8051 14 . A T 38.4219 . AB=0.15;ABP=24.2907;AC=1;AF=0.1;AN=10;AO=3;CIGAR=1X;DP=186;DPB=186;DPRA=0.481928;EPP=9.52472;EPPR=400.39;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=7339;RO=183;RPL=0;RPP=9.52472;RPPR=400.39;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=183;SRP=400.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 0/0:30:30,0:30:1217:0:0:0,-9.0309,-109.8 0/0:60:60,0:60:2380:0:0:0,-18.0618,-214.356 0/1:20:17,3:17:690:3:123:-5.44419,0,-56.4087 0/0:31:31,0:31:1244:0:0:0,-9.33193,-112.229 0/0:45:45,0:45:1808:0:0:0,-13.5463,-162.932 dDocent_Contig_8052 21 . T G 1831.32 . AB=0.232759;ABP=218.885;AC=4;AF=0.333333;AN=12;AO=81;CIGAR=1X;DP=376;DPB=376;DPRA=6.21429;EPP=178.9;EPPR=643.595;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99661;PAO=0;PQA=0;PQR=0;PRO=0;QA=3265;QR=11857;RO=295;RPL=0;RPP=178.9;RPPR=643.595;RPR=81;RUN=1;SAF=81;SAP=178.9;SAR=0;SRF=295;SRP=643.595;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:97:80,17:80:3225:17:690:-33.2288,0,-261.104 0/1:69:48,21:48:1939:21:848:-55.8607,0,-153.928 0/1:79:69,10:69:2775:10:408:-13.2992,0,-226.073 0/1:103:70,33:70:2791:33:1319:-87.9645,0,-220.288 0/0:2:2,0:2:82:0:0:0,-0.60206,-7.77968 0/0:26:26,0:26:1045:0:0:0,-7.82678,-94.3373 dDocent_Contig_8053 33 . T C 1855.53 . AB=0.220253;ABP=271.509;AC=6;AF=0.5;AN=12;AO=87;CIGAR=1X;DP=395;DPB=395;DPRA=0;EPP=191.928;EPPR=671.824;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3485;QR=12362;RO=308;RPL=0;RPP=191.928;RPPR=671.824;RPR=87;RUN=1;SAF=87;SAP=191.928;SAR=0;SRF=308;SRP=671.824;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:61:52,9:52:2077:9:366:-14.9423,0,-168.755 0/1:92:80,12:80:3194:12:468:-14.7658,0,-259.835 0/1:49:37,12:37:1493:12:483:-29.0696,0,-119.863 0/1:110:76,34:76:3063:34:1362:-89.7242,0,-242.631 0/1:58:46,12:46:1850:12:484:-26.4512,0,-149.242 0/1:25:17,8:17:685:8:322:-21.8221,0,-54.4537 dDocent_Contig_8054 8 . A G 1940.98 . AB=0.276074;ABP=144.995;AC=6;AF=0.5;AN=12;AO=90;CIGAR=1X;DP=326;DPB=326;DPRA=0;EPP=198.443;EPPR=515.478;GTI=0;LEN=1;MEANALT=1;MQM=55.8333;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.8;PAIREDR=0.889831;PAO=0;PQA=0;PQR=0;PRO=0;QA=3406;QR=8924;RO=236;RPL=0;RPP=198.443;RPPR=515.478;RPR=90;RUN=1;SAF=90;SAP=198.443;SAR=0;SRF=236;SRP=515.478;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:75:46,29:46:1730:29:1100:-75.9066,0,-133.38 0/1:79:63,16:63:2356:16:597:-29.5428,0,-188.478 0/1:44:25,19:25:959:19:737:-49.886,0,-73.3785 0/1:57:45,12:45:1702:12:443:-23.0177,0,-136.284 0/1:37:33,4:33:1268:4:156:-3.27918,0,-103.273 0/1:34:24,10:24:909:10:373:-23.6835,0,-71.8934 dDocent_Contig_8055 81 . G T 328.908 . AB=0.285714;ABP=25.3454;AC=1;AF=0.0833333;AN=12;AO=23;CIGAR=1X;DP=338;DPB=338;DPRA=1.50259;EPP=52.9542;EPPR=687.024;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.347826;PAIREDR=0.438095;PAO=0;PQA=0;PQR=0;PRO=0;QA=788;QR=10927;RO=315;RPL=15;RPP=7.63648;RPPR=132.396;RPR=8;RUN=1;SAF=15;SAP=7.63648;SAR=8;SRF=226;SRP=132.396;SRR=89;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:45:45,0:45:1535:0:0:0,-13.5463,-138.438 0/0:80:80,0:80:2783:0:0:0,-24.0824,-250.717 0/0:18:18,0:18:646:0:0:0,-5.41854,-58.4708 0/0:50:50,0:50:1728:0:0:0,-15.0515,-155.804 0/1:56:40,16:40:1401:16:566:-34.4137,0,-109.529 0/0:89:82,7:82:2834:7:222:0,-6.50367,-235.013 dDocent_Contig_8056 107 . N C 53.2187 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=51;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:17:-1.61499,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_8057 205 . G A 309.611 . AB=0.259259;ABP=16.6021;AC=3;AF=0.25;AN=12;AO=12;CIGAR=1X;DP=295;DPB=295;DPRA=0.243346;EPP=29.068;EPPR=617.537;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=440;QR=10179;RO=283;RPL=12;RPP=29.068;RPPR=617.537;RPR=0;RUN=1;SAF=0;SAP=29.068;SAR=12;SRF=0;SRP=617.537;SRR=283;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:90:90,0:90:3221:0:0:0,-27.0927,-290.101 0/0:54:54,0:54:1937:0:0:0,-16.2556,-174.597 0/0:37:37,0:37:1350:0:0:0,-11.1381,-121.799 0/0:82:82,0:82:2960:0:0:0,-24.6845,-266.62 1/1:5:0,5:0:0:5:183:-16.8268,-1.50515,0 0/1:27:20,7:20:711:7:257:-15.3562,0,-56.1834 dDocent_Contig_8059 89 . G A 59.1204 . AB=0.3;ABP=6.48466;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=299;DPB=299;DPRA=0.363636;EPP=13.8677;EPPR=639.252;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.764505;PAO=0;PQA=0;PQR=0;PRO=0;QA=188;QR=10800;RO=293;RPL=2;RPP=3.44459;RPPR=10.1324;RPR=3;RUN=1;SAF=2;SAP=3.44459;SAR=3;SRF=131;SRP=10.1324;SRR=162;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:72:72,0:72:2645:0:0:0,-21.6742,-238.225 0/0:72:72,0:72:2685:0:0:0,-21.6742,-241.824 0/1:10:7,3:7:278:3:112:-7.43492,0,-22.3786 0/0:36:33,2:33:1181:2:76:0,-3.58906,-99.4025 0/0:79:79,0:79:2953:0:0:0,-23.7814,-265.918 0/0:30:30,0:30:1058:0:0:0,-9.0309,-95.5027 dDocent_Contig_8060 45 . A C 30.9081 . AB=0.113636;ABP=60.0608;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=264;DPB=264;DPRA=0.83871;EPP=16.0391;EPPR=561.079;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.614786;PAO=0;PQA=0;PQR=0;PRO=0;QA=231;QR=9642;RO=257;RPL=0;RPP=16.0391;RPPR=561.079;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=257;SRP=561.079;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:44:39,5:39:1490:5:191:-4.31231,0,-121.122 0/0:65:65,0:65:2434:0:0:0,-19.5669,-219.263 0/0:34:33,1:33:1221:1:40:0,-6.23934,-106.174 0/0:22:22,0:22:825:0:0:0,-6.62266,-74.5703 0/0:61:61,0:61:2278:0:0:0,-18.3628,-205.241 0/0:38:37,0:37:1394:0:0:0,-11.1381,-125.639 dDocent_Contig_8061 16 . G A 6993.88 . AB=0.238431;ABP=760.708;AC=5;AF=0.416667;AN=12;AO=308;CIGAR=1X;DP=1487;DPB=1487;DPRA=0;EPP=671.824;EPPR=2539.29;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=12251;QR=46865;RO=1168;RPL=0;RPP=671.824;RPPR=2539.29;RPR=308;RUN=1;SAF=308;SAP=671.824;SAR=0;SRF=1168;SRP=2539.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:206:155,51:155:6206:51:2024:-120.332,0,-496.277 0/1:288:216,72:216:8714:72:2876:-172.237,0,-697.011 0/1:217:161,56:161:6478:56:2217:-134.383,0,-517.392 0/1:240:152,88:152:6106:88:3491:-241.977,0,-477.04 0/1:324:277,37:277:11083:37:1493:-39.6806,0,-901.764 0/0:212:207,4:207:8278:4:150:0,-50.0601,-730.659 dDocent_Contig_8062 10 . G C 217.6 . AB=0.168675;ABP=82.1513;AC=3;AF=0.25;AN=12;AO=15;CIGAR=1X;DP=175;DPB=175;DPRA=0.934426;EPP=35.5824;EPPR=350.446;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.466667;PAIREDR=0.48125;PAO=0;PQA=0;PQR=0;PRO=0;QA=602;QR=6410;RO=160;RPL=0;RPP=35.5824;RPPR=350.446;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=160;SRP=350.446;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:30,1:30:1206:1:41:0,-5.23736,-104.72 0/1:30:27,3:27:1077:3:115:-1.69148,0,-88.1892 0/1:34:26,8:26:1038:8:323:-19.2025,0,-83.4793 0/1:19:16,3:16:632:3:123:-5.74522,0,-51.4922 0/0:26:26,0:26:1039:0:0:0,-7.82678,-93.8035 0/0:35:35,0:35:1418:0:0:0,-10.536,-127.869 dDocent_Contig_8063 177 . G T 1029.54 . AB=0.842105;ABP=41.6397;AC=1;AF=0.0833333;AN=12;AO=32;CIGAR=1X;DP=141;DPB=141;DPRA=1.84466;EPP=72.4974;EPPR=239.701;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1285;QR=4305;RO=109;RPL=32;RPP=72.4974;RPPR=239.701;RPR=0;RUN=1;SAF=0;SAP=72.4974;SAR=32;SRF=0;SRP=239.701;SRR=109;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:2:2,0:2:81:0:0:0,-0.60206,-7.68573 0/0:45:45,0:45:1783:0:0:0,-13.5463,-160.686 0/0:15:15,0:15:587:0:0:0,-4.51545,-53.1618 0/0:16:16,0:16:611:0:0:0,-4.81648,-55.3144 0/1:38:6,32:6:241:32:1285:-104.477,0,-10.627 0/0:25:25,0:25:1002:0:0:0,-7.52575,-90.475 dDocent_Contig_8064 50 . C T 2653.4 . AB=0.390374;ABP=22.5303;AC=7;AF=0.583333;AN=12;AO=98;CIGAR=4M1X;DP=212;DPB=215.2;DPRA=0;EPP=215.815;EPPR=211.472;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.854167;PAO=0;PQA=0;PQR=0;PRO=0;QA=3600;QR=3771;RO=96;RPL=0;RPP=215.815;RPPR=211.472;RPR=98;RUN=1;SAF=98;SAP=215.815;SAR=0;SRF=96;SRP=211.472;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:25:0,0,25:0:0:0,25:0,938:-84.726,-84.726,-84.726,-7.52575,-7.52575,0 0|1:59:41,7,10:41:1610:7,10:267,383:-19.1068,-9.54071,-139.874,0,-110.55,-129.44 0|1:28:10,0,18:10:383:0,18:0,657:-51.0234,-54.0337,-85.4662,0,-31.8088,-26.3903 0|1:67:16,9,41:16:634:9,41:334,1471:-115.138,-92.6231,-142.108,0,-24.8781,-39.8574 0|1:16:14,0,2:14:557:0,2:0,77:-2.49266,-6.70708,-52.5811,0,-46.2603,-45.6582 0|1:17:15,0,2:15:587:0,2:0,74:-1.90792,-6.42337,-54.7058,0,-48.6546,-48.0526 dDocent_Contig_8065 21 . G A 1372.44 . AB=0.109909;ABP=2323.99;AC=3;AF=0.25;AN=12;AO=255;CIGAR=1X;DP=3065;DPB=3065;DPRA=0;EPP=556.736;EPPR=5975.25;GTI=0;LEN=1;MEANALT=1;MQM=59.9569;MQMR=54.8783;NS=6;NUMALT=1;ODDS=0;PAIRED=0.054902;PAIREDR=0.359075;PAO=0;PQA=0;PQR=0;PRO=0;QA=9870;QR=111208;RO=2810;RPL=0;RPP=556.736;RPPR=6104.85;RPR=255;RUN=1;SAF=255;SAP=556.736;SAR=0;SRF=2795;SRP=5975.25;SRR=15;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:566:509,57:509:20034:57:2224:-29.9676,0,-1540.22 0/1:718:637,81:637:25238:81:3111:-63.9642,0,-1979.69 0/1:472:417,55:417:16615:55:2116:-48.5343,0,-1282.09 0/0:639:586,53:586:23200:53:2065:0,-6.32263,-1809.96 0/0:362:356,6:356:14132:6:234:0,-87.5453,-1092.68 0/0:308:305,3:305:11989:3:120:0,-81.5295,-1003.69 dDocent_Contig_8066 25 . G T 6232.23 . AB=0.834061;ABP=224.984;AC=2;AF=0.166667;AN=12;AO=191;CIGAR=1X;DP=515;DPB=515;DPRA=1.6014;EPP=417.762;EPPR=704.396;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7708;QR=12877;RO=323;RPL=0;RPP=417.762;RPPR=704.396;RPR=191;RUN=1;SAF=191;SAP=417.762;SAR=0;SRF=323;SRP=704.396;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:64:63,0:63:2540:0:0:0,-18.9649,-228.438 0/0:94:94,0:94:3766:0:0:0,-28.2968,-338.945 0/0:89:89,0:89:3532:0:0:0,-26.7917,-317.908 0/0:39:39,0:39:1549:0:0:0,-11.7402,-139.647 0/1:180:34,146:34:1327:146:5885:-475.228,0,-65.4975 0/1:49:4,45:4:163:45:1823:-149.523,0,-0.307957 dDocent_Contig_8067 10 . G A 405.544 . AB=0.177305;ABP=130.542;AC=4;AF=0.333333;AN=12;AO=25;CIGAR=1X;DP=172;DPB=172;DPRA=2.27419;EPP=57.2971;EPPR=322.217;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=986;QR=5851;RO=147;RPL=0;RPP=57.2971;RPPR=322.217;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=147;SRP=322.217;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:865:0:0:0,-6.62266,-78.1598 0/1:73:61,12:61:2424:12:475:-21.123,0,-196.34 0/1:38:31,7:31:1236:7:273:-13.4947,0,-100.074 0/1:22:19,3:19:767:3:115:-4.10144,0,-62.7282 0/1:8:5,3:5:202:3:123:-9.05655,0,-16.1533 0/0:9:9,0:9:357:0:0:0,-2.70927,-32.4898 dDocent_Contig_8068 10 . G A 867.426 . AB=0.189781;ABP=117.528;AC=6;AF=0.5;AN=12;AO=26;CIGAR=2M1X;DP=137;DPB=137;DPRA=0;EPP=59.4686;EPPR=176.728;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.846154;PAIREDR=0.9125;PAO=0;PQA=0;PQR=0;PRO=0;QA=1045;QR=3029;RO=80;RPL=0;RPP=59.4686;RPPR=176.728;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=80;SRP=176.728;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:24:20,2,0,2:20:765:2,0,2:78,0,77:-0.393663,0,-62.172,-6.41426,-62.7741,-69.1865,-0.0952723,-56.4524,-62.8648,-62.2628 0|1:14:9,3,0,2:9:347:3,0,2:115,0,82:-6.71378,0,-27.5724,-9.42305,-28.4755,-37.913,-2.64432,-21.7029,-31.1413,-30.5392 0|1:15:10,0,0,5:10:386:0,0,5:0,0,197:-13.5893,-16.5996,-48.2953,-16.5996,-48.2953,-48.2953,0,-32.0866,-32.0866,-30.5815 0|1:26:19,2,0,5:19:717:2,0,5:78,0,204:-11.1246,-10.4375,-68.5732,-16.8441,-69.1753,-75.5875,0,-52.3376,-58.7505,-57.2454 0|1:24:14,2,1,7:14:518:2,1,7:78,39,282:-19.0373,-16.8422,-58.5938,-20.0468,-55.9896,-62.1011,0,-35.9431,-39.1502,-40.2499 0|1:34:8,6,15,5:8:296:6,15,5:234,583,203:-45.4961,-28.6698,-51.0702,0,-4.96449,-19.6862,-31.1588,-36.1298,-7.45213,-53.8615 dDocent_Contig_8069 25 . A G 702.361 . AB=0.110465;ABP=229.702;AC=2;AF=0.166667;AN=12;AO=32;CIGAR=1X2M;DP=592;DPB=592;DPRA=1.36164;EPP=72.4974;EPPR=1110.46;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1293;QR=20078;RO=510;RPL=0;RPP=72.4974;RPPR=1110.46;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=510;SRP=1110.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:150:136,7,7:136:5320:7,7:277,284:0,-18.1481,-453.405,-17.5136,-432.09,-452.78 0|0:155:146,9,0:146:5744:9,0:359,0:0,-13.9865,-484.147,-43.9504,-486.857,-516.422 0|1:137:96,28,13:96:3771:28,13:1102,523:-61.7457,0,-301.698,-47.5399,-267.024,-353.761 0|0:111:99,6,6:99:3919:6,6:236,243:0,-10.3942,-331.11,-9.75891,-312.879,-330.486 0|0:4:4,0,0:4:161:0,0:0,0:0,-1.20412,-14.8753,-1.20412,-14.8753,-14.8753 0|1:35:29,0,6:29:1163:0,6:0,243:-11.7121,-20.442,-116.256,0,-96.2179,-94.4117 dDocent_Contig_8071 26 . T A 286.395 . AB=0.197368;ABP=63.4687;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=232;DPB=232;DPRA=0.974359;EPP=35.5824;EPPR=474.22;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.4;PAIREDR=0.43318;PAO=0;PQA=0;PQR=0;PRO=0;QA=600;QR=8458;RO=217;RPL=0;RPP=35.5824;RPPR=474.22;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=217;SRP=474.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:32,6:32:1268:6:240:-10.5369,0,-102.952 0/0:31:31,0:31:1198:0:0:0,-9.33193,-108.087 0/0:22:22,0:22:829:0:0:0,-6.62266,-74.9173 0/1:38:29,9:29:1152:9:360:-21.3244,0,-92.5203 0/0:25:25,0:25:948:0:0:0,-7.52575,-85.6 0/0:78:78,0:78:3063:0:0:0,-23.4803,-275.773 dDocent_Contig_8073 51 . T G 36.2815 . AB=0.125;ABP=42.0968;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=203;DPB=203;DPRA=0.929577;EPP=24.725;EPPR=404.913;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.4;PAIREDR=0.502591;PAO=0;PQA=0;PQR=0;PRO=0;QA=396;QR=7667;RO=193;RPL=10;RPP=24.725;RPPR=404.913;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=193;SRP=422.104;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:23,1:23:913:1:40:0,-3.22904,-78.476 0/0:52:48,4:48:1930:4:159:0,-0.961605,-159.207 0/1:32:28,4:28:1110:4:160:-5.15084,0,-90.5507 0/0:24:23,1:23:919:1:37:0,-3.52689,-79.3168 0/0:40:40,0:40:1597:0:0:0,-12.0412,-143.966 0/0:31:31,0:31:1198:0:0:0,-9.33193,-108.09 dDocent_Contig_8074 14 . G C 11236.9 . AB=0.334416;ABP=223.062;AC=7;AF=0.583333;AN=12;AO=391;CIGAR=1X;DP=1007;DPB=1007;DPRA=0;EPP=852.056;EPPR=1338.47;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=15675;QR=24348;RO=615;RPL=0;RPP=852.056;RPPR=1338.47;RPR=391;RUN=1;SAF=391;SAP=852.056;SAR=0;SRF=615;SRP=1338.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:261:215,46:215:8506:46:1821:-85.5281,0,-686.522 0/1:216:127,89:127:4988:89:3567:-256.022,0,-383.79 0/1:169:79,90:79:3157:90:3629:-275.747,0,-233.326 0/1:247:177,70:177:7012:70:2786:-176.496,0,-556.422 0/1:31:17,14:17:685:14:560:-41.4076,0,-52.6472 1/1:83:0,82:0:0:82:3312:-297.715,-24.6845,0 dDocent_Contig_8075 11 . C T 88.9677 . AB=0.166667;ABP=43.5445;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=102;DPB=102;DPRA=1.81818;EPP=22.5536;EPPR=204.957;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8065;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.978495;PAO=0;PQA=0;PQR=0;PRO=0;QA=345;QR=3723;RO=93;RPL=0;RPP=22.5536;RPPR=204.957;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=93;SRP=204.957;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:18,3:18:728:3:107:-3.65477,0,-59.5212 0/0:2:2,0:2:82:0:0:0,-0.60206,-7.77968 0/1:21:17,4:17:685:4:160:-8.4618,0,-55.657 0/0:24:23,1:23:925:1:40:0,-3.22904,-79.5552 0/0:20:20,0:20:773:0:0:0,-6.0206,-69.8886 0/0:14:13,1:13:530:1:38:0,-0.417151,-44.0232 dDocent_Contig_8076 8 . A T 1994.08 . AB=0.340708;ABP=52.8196;AC=5;AF=0.416667;AN=12;AO=77;CIGAR=1X6M1X10M;DP=271;DPB=265;DPRA=1.00444;EPP=170.214;EPPR=307.016;GTI=0;LEN=1;MEANALT=5.6;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2920;QR=5497;RO=140;RPL=0;RPP=170.214;RPPR=307.016;RPR=77;RUN=1;SAF=77;SAP=170.214;SAR=0;SRF=140;SRP=307.016;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:44:14,0,3,23:14:552:0,3,23:0,75,883:-68.3616,-72.576,-118.005,-67.555,-112.98,-112.077,0,-45.5061,-40.4917,-38.5824 0|1:43:12,0,7,17:12:473:0,7,17:0,151,651:-49.9181,-53.5305,-92.474,-43.9622,-82.9002,-80.793,0,-39.0097,-29.4456,-33.8922 0|1:34:20,0,1,12:20:785:0,1,12:0,25,441:-30.2378,-36.2584,-100.856,-34.5884,-99.1814,-98.8804,0,-64.8062,-63.1345,-61.1938 0|1:65:33,0,8,16:33:1286:0,8,16:0,200,611:-40.2675,-50.2014,-155.94,-36.8025,-142.53,-140.121,0,-105.8,-92.3939,-100.983 0|0:45:36,3,3,0:36:1414:3,3,0:114,75,0:0,-1.4352,-116.977,-5.82826,-112.856,-121.302,-10.8371,-117.88,-122.205,-127.23 0|1:40:25,2,2,9:25:987:2,2,9:78,50,334:-19.8449,-20.9519,-101.604,-24.0324,-98.8571,-104.667,0,-74.8761,-77.9422,-78.5794 dDocent_Contig_8077 7 . T A 779.162 . AB=0.170213;ABP=269.408;AC=2;AF=0.166667;AN=12;AO=61;CIGAR=1X;DP=1165;DPB=1165;DPRA=0.974684;EPP=135.47;EPPR=2393.8;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=59.9791;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2331;QR=41921;RO=1101;RPL=0;RPP=135.47;RPPR=2393.8;RPR=61;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=1101;SRP=2393.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:271:270,1:270:10280:1:39:0,-77.6826,-920.948 0/0:256:256,0:256:9716:0:0:0,-77.0637,-874.134 0/0:139:138,0:138:5248:0:0:0,-41.5421,-471.838 0/1:132:113,17:113:4295:17:653:-19.7036,0,-347.233 0/0:217:205,12:205:7824:12:458:0,-23.7538,-662.414 0/1:150:119,31:119:4558:31:1181:-61.4345,0,-365.121 dDocent_Contig_8078 7 . T A 2101 . AB=0.221987;ABP=320.555;AC=5;AF=0.416667;AN=12;AO=108;CIGAR=1X;DP=585;DPB=585;DPRA=0;EPP=237.529;EPPR=1038.8;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.916667;PAIREDR=0.930818;PAO=0;PQA=0;PQR=0;PRO=0;QA=4118;QR=18177;RO=477;RPL=0;RPP=237.529;RPPR=1038.8;RPR=108;RUN=1;SAF=108;SAP=237.529;SAR=0;SRF=477;SRP=1038.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:70:46,24:46:1723:24:925:-62.4941,0,-134.257 0/1:121:96,25:96:3692:25:945:-48.9345,0,-295.967 0/1:89:72,17:72:2782:17:638:-30.9632,0,-223.767 0/1:109:79,30:79:2996:30:1144:-70.446,0,-236.99 0/0:112:109,3:109:4143:3:117:0,-22.805,-362.043 0/1:84:75,9:75:2841:9:349:-6.48437,0,-230.58 dDocent_Contig_8079 98 . N C 126.685 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=7.37776;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=137;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:137:-12.6682,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_8080 50 . A C 1091.97 . AB=0.587302;ABP=7.18091;AC=2;AF=0.166667;AN=12;AO=37;CIGAR=1X;DP=125;DPB=125;DPRA=2.03226;EPP=83.3548;EPPR=194.1;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1453;QR=3532;RO=88;RPL=37;RPP=83.3548;RPPR=194.1;RPR=0;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=88;SRP=194.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:722:0:0:0,-5.41854,-65.3067 0/0:20:20,0:20:799:0:0:0,-6.0206,-72.2285 0/0:14:14,0:14:567:0:0:0,-4.21442,-51.3731 0/0:10:10,0:10:391:0:0:0,-3.0103,-35.5444 0/1:15:12,3:12:486:3:109:-5.64986,0,-39.5764 0/1:48:14,34:14:567:34:1344:-106.769,0,-36.9228 dDocent_Contig_8081 18 . C T 3419.95 . AB=0.574713;ABP=7.22845;AC=3;AF=0.25;AN=12;AO=106;CIGAR=1X;DP=231;DPB=231;DPRA=3.25;EPP=233.186;EPPR=274.444;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4100;QR=5009;RO=125;RPL=0;RPP=233.186;RPPR=274.444;RPR=106;RUN=1;SAF=106;SAP=233.186;SAR=0;SRF=125;SRP=274.444;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:477:0:0:0,-3.61236,-43.277 0/0:25:25,0:25:992:0:0:0,-7.52575,-89.5732 0/0:20:20,0:20:814:0:0:0,-6.0206,-73.5745 0/0:31:31,0:31:1232:0:0:0,-9.33193,-111.151 1/1:56:0,56:0:0:56:2176:-196.025,-16.8577,0 0/1:87:37,50:37:1494:50:1924:-147.192,0,-108.512 dDocent_Contig_8083 22 . T C 274.273 . AB=0.47619;ABP=3.1137;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=267;DPB=267;DPRA=0.426829;EPP=24.725;EPPR=561.079;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.996109;PAO=0;PQA=0;PQR=0;PRO=0;QA=388;QR=10178;RO=257;RPL=0;RPP=24.725;RPPR=561.079;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=257;SRP=561.079;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:45:45,0:45:1793:0:0:0,-13.5463,-161.588 0/0:33:33,0:33:1311:0:0:0,-9.93399,-118.259 0/1:21:11,10:11:435:10:388:-28.9501,0,-33.1797 0/0:39:39,0:39:1543:0:0:0,-11.7402,-139.11 0/0:107:107,0:107:4229:0:0:0,-32.2102,-380.593 0/0:22:22,0:22:867:0:0:0,-6.62266,-78.3412 dDocent_Contig_8084 7 . T A 189.715 . AB=0.32;ABP=10.0459;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=218;DPB=218;DPRA=0.647668;EPP=20.3821;EPPR=459.02;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.614286;PAO=0;PQA=0;PQR=0;PRO=0;QA=304;QR=7994;RO=210;RPL=0;RPP=20.3821;RPPR=459.02;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=210;SRP=459.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:17,8:17:636:8:304:-20.1934,0,-50.0426 0/0:56:56,0:56:2144:0:0:0,-16.8577,-193.186 0/0:35:35,0:35:1340:0:0:0,-10.536,-120.886 0/0:43:43,0:43:1631:0:0:0,-12.9443,-147.057 0/0:31:31,0:31:1184:0:0:0,-9.33193,-106.856 0/0:28:28,0:28:1059:0:0:0,-8.42884,-95.6114 dDocent_Contig_8085 46 . A T 121.283 . AB=0.121212;ABP=167.516;AC=3;AF=0.25;AN=12;AO=22;CIGAR=1X;DP=287;DPB=287;DPRA=1.235;EPP=50.7827;EPPR=578.45;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.996226;PAO=0;PQA=0;PQR=0;PRO=0;QA=866;QR=10458;RO=265;RPL=0;RPP=50.7827;RPPR=578.45;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=265;SRP=578.45;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:48:42,6:42:1690:6:219:-5.60514,0,-137.874 0/0:55:52,3:52:2064:3:123:0,-5.09186,-174.482 0/0:60:57,3:57:2271:3:121:0,-6.7816,-193.273 0/1:51:45,6:45:1743:6:243:-6.89544,0,-141.743 0/0:40:40,0:40:1579:0:0:0,-12.0412,-142.342 0/1:33:29,4:29:1111:4:160:-4.84944,0,-90.3378 dDocent_Contig_8086 8 . A G 4003.47 . AB=0.345652;ABP=98.1963;AC=6;AF=0.5;AN=12;AO=159;CIGAR=1M1X;DP=460;DPB=460;DPRA=0;EPP=348.274;EPPR=632.737;GTI=0;LEN=1;MEANALT=1.5;MQM=58.9371;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.742138;PAIREDR=0.993103;PAO=0;PQA=0;PQR=0;PRO=0;QA=6091;QR=11035;RO=290;RPL=0;RPP=348.274;RPPR=632.737;RPR=159;RUN=1;SAF=159;SAP=348.274;SAR=0;SRF=290;SRP=632.737;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:72:57,0,0,15:57:2153:0,0,15:0,0,563:-29.3266,-46.4853,-222.956,-46.4853,-222.956,-222.956,0,-176.846,-176.846,-172.331 0|1:72:28,6,4,34:28:1056:6,4,34:186,132,1294:-97.7277,-91.2399,-175.975,-95.4913,-167.115,-180.831,0,-71.6683,-75.919,-76.3492 0|1:65:43,1,0,21:43:1637:1,0,21:38,0,816:-52.9928,-62.8207,-196.791,-65.9371,-197.092,-200.209,0,-131.157,-134.273,-127.952 0|1:79:47,0,0,32:47:1784:0,0,32:0,0,1218:-86.1351,-100.284,-246.574,-100.284,-246.574,-246.574,0,-146.67,-146.67,-137.037 0|1:81:58,0,0,23:58:2237:0,0,23:0,0,892:-55.6588,-73.1185,-256.825,-73.1185,-256.825,-256.825,0,-184.091,-184.091,-177.167 0|1:91:57,0,0,34:57:2168:0,0,34:0,0,1308:-89.7281,-106.887,-284.697,-106.887,-284.697,-284.697,0,-178.191,-178.191,-167.956 dDocent_Contig_8087 35 . T A 1029.46 . AB=0.277419;ABP=69.7095;AC=3;AF=0.25;AN=12;AO=56;CIGAR=4M1I2M1X;DP=407;DPB=420.143;DPRA=0;EPP=124.613;EPPR=723.939;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2185;QR=13208;RO=332;RPL=0;RPP=124.613;RPPR=723.939;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=332;SRP=723.939;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:58:35,17,6,0:35:1392:17,6,0:651,235,0:-42.8702,0,-109.498,-34.0832,-95.296,-146.898,-53.4062,-114.616,-148.704,-168.024 0|1:57:40,15,2,0:40:1606:15,2,0:587,79,0:-36.2191,0,-127.826,-41.7593,-125.841,-173.5,-48.2603,-132.341,-174.102,-180.602 0|1:40:22,11,4,2:22:881:11,4,2:434,162,81:-29.0784,0,-69.2638,-22.341,-59.2163,-93.718,-29.0212,-65.8957,-88.2426,-101 0|0:75:66,5,4,0:66:2624:5,4,0:198,159,0:0,-3.57217,-218.099,-6.77677,-206.513,-221.606,-19.868,-219.604,-222.81,-235.9 0|0:102:96,6,0,0:96:3805:6,0,0:236,0,0:0,-9.09332,-320.872,-28.8989,-322.678,-342.091,-28.8989,-322.678,-342.091,-342.091 0|0:75:73,2,0,0:73:2900:2,0,0:79,0,0:0,-15.0796,-253.622,-21.9752,-254.224,-260.725,-21.9752,-254.224,-260.725,-260.725 dDocent_Contig_8088 44 . T A 227.382 . AB=0.196721;ABP=51.7438;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=147;DPB=147;DPRA=1.49153;EPP=31.2394;EPPR=291.816;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.615385;PAIREDR=0.654135;PAO=0;PQA=0;PQR=0;PRO=0;QA=524;QR=5392;RO=133;RPL=0;RPP=31.2394;RPPR=291.816;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=133;SRP=291.816;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:693:0:0:0,-5.11751,-62.698 0/1:40:36,4:36:1462:4:161:-2.8337,0,-119.781 0/1:21:13,8:13:529:8:323:-23.1158,0,-41.6352 0/0:27:25,1:25:1018:1:40:0,-4.22075,-87.9236 0/0:31:31,0:31:1241:0:0:0,-9.33193,-111.954 0/0:11:11,0:11:449:0:0:0,-3.31133,-40.7659 dDocent_Contig_8089 31 . T G 8079.54 . AB=0.449921;ABP=16.7123;AC=5;AF=0.416667;AN=12;AO=284;CIGAR=1X;DP=678;DPB=678;DPRA=0;EPP=619.708;EPPR=854.227;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.989437;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11212;QR=15545;RO=392;RPL=0;RPP=619.708;RPPR=854.227;RPR=284;RUN=1;SAF=284;SAP=619.708;SAR=0;SRF=392;SRP=854.227;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:111:56,55:56:2209:55:2168:-161.882,0,-165.564 0/1:121:74,47:74:2930:47:1840:-129.39,0,-227.382 0/1:175:100,73:100:3961:73:2870:-205.918,0,-304.007 0/1:139:63,76:63:2500:76:3031:-231.028,0,-183.298 0/0:49:48,1:48:1930:1:40:0,-10.7548,-169.898 0/1:83:51,32:51:2015:32:1263:-88.9577,0,-156.558 dDocent_Contig_8090 21 . A G 200.981 . AB=0.174603;ABP=60.9507;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=281;DPB=281;DPRA=1.44495;EPP=26.8965;EPPR=589.308;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=447;QR=10578;RO=270;RPL=0;RPP=26.8965;RPPR=589.308;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=270;SRP=589.308;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:70:70,0:70:2759:0:0:0,-21.0721,-248.433 0/1:63:52,11:52:2023:11:447:-21.621,0,-163.303 0/0:42:42,0:42:1644:0:0:0,-12.6433,-148.196 0/0:78:78,0:78:3062:0:0:0,-23.4803,-275.677 0/0:24:24,0:24:929:0:0:0,-7.22472,-83.9109 0/0:4:4,0:4:161:0:0:0,-1.20412,-14.8749 dDocent_Contig_8091 7 . T A 84410.2 . AB=0.117194;ABP=5791.85;AC=12;AF=1;AN=12;AO=533;CIGAR=1X14M;DP=4548;DPB=4546.47;DPRA=0;EPP=1160.41;EPPR=372.161;GTI=0;LEN=1;MEANALT=29.3333;MQM=60;MQMR=60;NS=6;NUMALT=6;ODDS=8.88178e-16;PAIRED=0.928705;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=20087;QR=6603;RO=170;RPL=0;RPP=1160.41;RPPR=372.161;RPR=533;RUN=1;SAF=533;SAP=1160.41;SAR=0;SRF=170;SRP=372.161;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:657:14,22,34,60,303,24,92:14:543:22,34,60,303,24,92:811,1257,1765,11388,906,3461:-1167.7,-1105.6,-1143.59,-1069.1,-1047.39,-1103.48,-1042.74,-1021.03,-984.533,-1069.29,-238.962,-217.256,-180.759,-154.403,-192.364,-1097.66,-1075.96,-1039.46,-1013.09,-209.321,-1135.05,-888.346,-866.64,-830.143,-803.78,0,-858.705,-905.264 1|1:864:29,15,43,60,444,26,121:29:1120:15,43,60,444,26,121:552,1614,1909,16580,988,4550:-1629.31,-1592.91,-1680.37,-1505.89,-1552.74,-1584.93,-1493.89,-1540.74,-1453.72,-1567.81,-280.798,-327.651,-240.633,-228.639,-239.125,-1557.01,-1603.87,-1516.85,-1504.85,-291.759,-1641.17,-1265.26,-1312.11,-1225.09,-1213.1,0,-1276.22,-1320.82 1|1:630:31,11,14,23,392,33,44:31:1190:11,14,23,392,33,44:420,530,831,14833,1296,1638:-1243.03,-1217.9,-1312.26,-1208.93,-1272.14,-1302.39,-1186.32,-1249.53,-1240.55,-1277.07,-36.3972,-99.6104,-90.6343,-68.026,-16.0676,-1145.77,-1208.98,-1200,-1177.39,-27.4724,-1233.51,-1118.29,-1181.51,-1172.53,-1149.92,0,-1109.37,-1202.72 1|1:681:10,11,33,28,349,10,91:10:393:11,33,28,349,10,91:424,1244,843,13006,391,3440:-1311.19,-1279.38,-1308.4,-1212.26,-1209.77,-1234.65,-1252.59,-1250.09,-1182.97,-1276.48,-249.652,-247.16,-180.037,-220.368,-176.919,-1282.05,-1279.56,-1212.44,-1252.76,-249.831,-1311.37,-1032.23,-1029.73,-962.611,-1002.94,0,-1032.4,-1037.16 1|1:933:41,75,80,52,480,38,96:41:1599:75,80,52,480,38,96:2827,2997,1657,18053,1470,3623:-1632.23,-1412.91,-1521.77,-1399.16,-1298.94,-1506.52,-1519.28,-1419.06,-1405.31,-1635.07,-165.491,-65.2641,-51.5197,-171.644,-152.436,-1523.83,-1423.6,-1409.86,-1529.97,-176.183,-1643.83,-1347.64,-1247.42,-1233.67,-1353.79,0,-1358.34,-1450.18 1|1:783:45,36,40,34,435,33,89:45:1758:36,40,34,435,33,89:1359,1513,1017,16470,1251,3375:-1468.78,-1370.95,-1504.64,-1358.31,-1391.45,-1490.79,-1407,-1440.15,-1427.51,-1541.29,-132.197,-165.344,-152.703,-201.405,-145.778,-1379.77,-1412.91,-1400.27,-1448.97,-174.161,-1514.36,-1205.61,-1238.75,-1226.11,-1274.81,0,-1247.57,-1323.34 dDocent_Contig_8092 29 . T C 348.606 . AB=0.147727;ABP=192.718;AC=4;AF=0.333333;AN=12;AO=29;CIGAR=1X;DP=274;DPB=274;DPRA=0;EPP=65.983;EPPR=535.021;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.137931;PAIREDR=0.938776;PAO=0;PQA=0;PQR=0;PRO=0;QA=1163;QR=9823;RO=245;RPL=0;RPP=65.983;RPPR=535.021;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=245;SRP=535.021;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:72:70,2:70:2808:2:82:0,-13.8945,-245.043 0/1:22:19,3:19:767:3:121:-4.65754,0,-62.7261 0/0:26:25,1:25:1001:1:41:0,-3.73221,-86.2907 0/1:84:75,9:75:3021:9:365:-7.92833,0,-246.681 0/1:64:53,11:53:2103:11:445:-21.1396,0,-170.18 0/1:6:3,3:3:123:3:109:-8.35681,0,-9.65861 dDocent_Contig_8093 18 . T G 17646.7 . AB=0.31899;ABP=611.465;AC=3;AF=0.25;AN=12;AO=796;CIGAR=1X;DP=4349;DPB=4349;DPRA=0;EPP=1731.5;EPPR=7711.74;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999718;PAO=0;PQA=0;PQR=0;PRO=0;QA=31325;QR=141309;RO=3550;RPL=0;RPP=1731.5;RPPR=7711.74;RPR=796;RUN=1;SAF=796;SAP=1731.5;SAR=0;SRF=3550;SRP=7711.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:951:902,48:902:35795:48:1870:0,-117.658,-3049.75 0/1:907:809,98:809:32203:98:3852:-73.6563,0,-2622.27 0/0:482:456,26:456:18210:26:1028:0,-52.2849,-1544.58 0/0:778:738,40:738:29373:40:1595:0,-90.4146,-2497.15 0/1:594:249,344:249:9939:344:13514:-1036.62,0,-715.204 0/1:637:396,240:396:15789:240:9466:-659.614,0,-1227.99 dDocent_Contig_8094 71 . G A 213.211 . AB=0.1875;ABP=57.2971;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=217;DPB=217;DPRA=2.93182;EPP=33.4109;EPPR=443.819;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.214286;PAIREDR=0.517241;PAO=0;PQA=0;PQR=0;PRO=0;QA=546;QR=7649;RO=203;RPL=4;RPP=8.59409;RPPR=19.2803;RPR=10;RUN=1;SAF=4;SAP=8.59409;SAR=10;SRF=121;SRP=19.2803;SRR=82;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:11:11,0:11:361:0:0:0,-3.31133,-32.7934 0/0:65:63,2:63:2387:2:82:0,-11.7873,-207.245 0/0:33:33,0:33:1245:0:0:0,-9.93399,-112.339 0/1:64:52,12:52:1981:12:464:-22.8439,0,-159.249 0/0:24:24,0:24:917:0:0:0,-7.22472,-82.8407 0/0:20:20,0:20:758:0:0:0,-6.0206,-68.545 dDocent_Contig_8095 18 . A T 712.134 . AB=0.256;ABP=67.6507;AC=5;AF=0.416667;AN=12;AO=32;CIGAR=1X;DP=159;DPB=159;DPRA=0.735294;EPP=72.4974;EPPR=278.787;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.984252;PAO=0;PQA=0;PQR=0;PRO=0;QA=1291;QR=5053;RO=127;RPL=0;RPP=72.4974;RPPR=278.787;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=127;SRP=278.787;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:34,0:34:1351:0:0:0,-10.235,-121.849 0/1:44:37,7:37:1476:7:278:-12.1431,0,-119.839 0/1:18:15,3:15:594:3:120:-5.76877,0,-48.3752 0/1:16:11,5:11:437:5:204:-13.9276,0,-34.8665 0/1:16:10,6:10:397:6:246:-17.7036,0,-31.2694 0/1:31:20,11:20:798:11:443:-30.8922,0,-62.8058 dDocent_Contig_8096 54 . T G 56.352 . AB=0.214286;ABP=12.937;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=185;DPB=185;DPRA=0.409357;EPP=9.52472;EPPR=396.047;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=122;QR=6916;RO=181;RPL=3;RPP=9.52472;RPPR=396.047;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=181;SRP=396.047;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:11:11,0:11:420:0:0:0,-3.31133,-38.1488 0/0:31:31,0:31:1201:0:0:0,-9.33193,-108.379 0/0:62:61,0:61:2314:0:0:0,-18.3628,-208.36 0/0:36:36,0:36:1387:0:0:0,-10.8371,-125.102 0/0:31:31,0:31:1175:0:0:0,-9.33193,-106.042 0/1:14:11,3:11:419:3:122:-7.15807,0,-33.8428 dDocent_Contig_8097 142 . G T 54.2058 . AB=0.2;ABP=22.5536;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=1X;DP=79;DPB=79;DPRA=1.63333;EPP=18.2106;EPPR=159.356;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.986111;PAO=0;PQA=0;PQR=0;PRO=0;QA=244;QR=2551;RO=72;RPL=0;RPP=18.2106;RPPR=159.356;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=159.356;SRR=72;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:358:0:0:0,-3.0103,-32.5629 0/1:18:15,3:15:531:3:100:-3.91158,0,-42.7042 0/0:24:22,2:22:786:2:72:0,-0.387997,-64.2278 0/0:14:14,0:14:497:0:0:0,-4.21442,-45.065 0/1:7:5,2:5:178:2:72:-4.72951,0,-14.2614 0/0:6:6,0:6:201:0:0:0,-1.80618,-18.4189 dDocent_Contig_8098 7 . T A 169.82 . AB=0.266667;ABP=17.1973;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=140;DPB=140;DPRA=1.36364;EPP=20.3821;EPPR=289.645;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0.712121;PAO=0;PQA=0;PQR=0;PRO=0;QA=302;QR=5064;RO=132;RPL=0;RPP=20.3821;RPPR=289.645;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=132;SRP=289.645;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:645:0:0:0,-5.11751,-58.3844 0/0:25:25,0:25:953:0:0:0,-7.52575,-86.0843 0/1:30:22,8:22:855:8:302:-18.5049,0,-68.2411 0/0:19:19,0:19:724:0:0:0,-5.71957,-65.4892 0/0:16:16,0:16:620:0:0:0,-4.81648,-56.14 0/0:33:33,0:33:1267:0:0:0,-9.93399,-114.322 dDocent_Contig_8100 1 . N G 140.679 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=145;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:78:-7.4033,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:67:-6.36253,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_8101 16 . C A 146.195 . AB=0.15873;ABP=66.7413;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=280;DPB=280;DPRA=0.580645;EPP=24.725;EPPR=589.308;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=400;QR=10771;RO=270;RPL=0;RPP=24.725;RPPR=589.308;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=270;SRP=589.308;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:898:0:0:0,-6.92369,-81.1189 0/1:33:26,7:26:1048:7:280:-15.6372,0,-84.6768 0/0:17:17,0:17:684:0:0:0,-5.11751,-61.889 0/1:30:27,3:27:1083:3:120:-2.15641,0,-88.7239 0/0:90:90,0:90:3564:0:0:0,-27.0927,-320.794 0/0:87:87,0:87:3494:0:0:0,-26.1896,-314.493 dDocent_Contig_8102 142 . C T 129.18 . AB=0.163934;ABP=62.8504;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=2X;DP=153;DPB=153;DPRA=2.97727;EPP=31.2394;EPPR=304.845;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.615385;PAIREDR=0.640288;PAO=0;PQA=0;PQR=0;PRO=0;QA=489;QR=5189;RO=139;RPL=13;RPP=31.2394;RPPR=304.845;RPR=0;RUN=1;SAF=0;SAP=31.2394;SAR=13;SRF=0;SRP=304.845;SRR=139;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:32:31,1:31:1168:1:38:0,-5.83569,-101.628 0|1:29:26,3:26:961:3:113:-1.80967,0,-78.0683 0|1:32:25,7:25:942:7:263:-14.3965,0,-75.4653 0|0:38:36,2:36:1333:2:75:0,-4.3188,-113.143 0|0:8:7,0:7:263:0:0:0,-2.10721,-23.6592 0|0:14:14,0:14:522:0:0:0,-4.21442,-47.3223 dDocent_Contig_8103 107 . N A 1162.7 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=37;CIGAR=1X;DP=37;DPB=37;DPRA=0;EPP=83.3548;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1261;QR=0;RO=0;RPL=0;RPP=83.3548;RPPR=0;RPR=37;RUN=1;SAF=0;SAP=83.3548;SAR=37;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:6:0,6:0:0:6:197:-18.0526,-1.80618,0 1/1:10:0,10:0:0:10:347:-31.5653,-3.0103,0 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 1/1:7:0,7:0:0:7:237:-21.6614,-2.10721,0 1/1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 1/1:10:0,10:0:0:10:343:-31.2017,-3.0103,0 dDocent_Contig_8104 12 . T A 1477.03 . AB=0.27686;ABP=107.672;AC=3;AF=0.25;AN=12;AO=74;CIGAR=1X;DP=634;DPB=634;DPRA=1.05392;EPP=163.699;EPPR=1219.03;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998214;PAO=0;PQA=0;PQR=0;PRO=0;QA=2764;QR=21652;RO=560;RPL=0;RPP=163.699;RPPR=1219.03;RPR=74;RUN=1;SAF=74;SAP=163.699;SAR=0;SRF=560;SRP=1219.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:958:0:0:0,-7.52575,-86.5227 0/1:91:58,33:58:2209:33:1251:-85.4905,0,-171.609 0/1:45:32,13:32:1250:13:476:-29.6313,0,-99.2282 0/1:106:85,21:85:3268:21:771:-37.8032,0,-262.322 0/0:188:181,7:181:6986:7:266:0,-32.2925,-604.221 0/0:179:179,0:179:6981:0:0:0,-53.8844,-628.051 dDocent_Contig_8105 28 . A G 2454.04 . AB=0.287356;ABP=71.3493;AC=4;AF=0.333333;AN=12;AO=91;CIGAR=1X;DP=465;DPB=465;DPRA=1.27619;EPP=200.614;EPPR=812.97;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3616;QR=14768;RO=373;RPL=0;RPP=200.614;RPPR=812.97;RPR=91;RUN=1;SAF=91;SAP=200.614;SAR=0;SRF=373;SRP=812.97;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:90:84,6:84:3316:6:241:0,-5.0269,-276.43 0/0:104:103,1:103:4059:1:40:0,-27.3114,-361.311 0/0:63:62,0:62:2497:0:0:0,-18.6639,-224.461 0/1:113:102,11:102:4003:11:442:-6.11854,0,-326.256 1/1:34:0,34:0:0:34:1328:-119.782,-10.235,0 0/1:61:22,39:22:893:39:1565:-122.726,0,-62.3124 dDocent_Contig_8106 54 . G T 2120.8 . AB=0.296053;ABP=112.841;AC=3;AF=0.25;AN=12;AO=92;CIGAR=1X;DP=627;DPB=627;DPRA=0.436548;EPP=202.786;EPPR=1162.58;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.983146;PAO=0;PQA=0;PQR=0;PRO=0;QA=3469;QR=20628;RO=534;RPL=92;RPP=202.786;RPPR=1162.58;RPR=0;RUN=1;SAF=92;SAP=202.786;SAR=0;SRF=534;SRP=1162.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:108:79,29:79:3003:29:1071:-64.1555,0,-237.863 0/1:79:65,14:65:2563:14:544:-25.5177,0,-207.04 0/1:117:70,47:70:2543:47:1807:-127.629,0,-193.799 0/0:197:196,0:196:7654:0:0:0,-59.0019,-688.102 0/0:29:28,1:28:1087:1:39:0,-4.83331,-94.2182 0/0:97:96,1:96:3778:1:8:0,-28.3999,-339.237 dDocent_Contig_8107 11 . A G 99.4339 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=9;CIGAR=1X1M1X3M2X;DP=1063;DPB=1063;DPRA=0.925065;EPP=22.5536;EPPR=2076.77;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.991623;PAO=0;PQA=0;PQR=0;PRO=0;QA=353;QR=37442;RO=955;RPL=0;RPP=22.5536;RPPR=2076.77;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=955;SRP=2076.77;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:131:120,0,5:120:4687:0,5:0,201:0,-36.1236,-421.437,-19.5369,-404.872,-403.367 0|0:181:168,0,3:168:6556:0,3:0,120:0,-50.573,-589.499,-40.6739,-579.614,-578.711 0|0:110:93,0,12:93:3629:0,12:0,479:-11.4663,-39.4621,-337.759,0,-298.309,-294.697 0|0:221:199,0,5:199:7817:0,5:0,166:0,-59.905,-702.839,-46.4963,-689.419,-687.914 0|0:179:162,9,0:162:6374:9,0:353,0:0,-19.7385,-541.351,-48.7669,-544.06,-573.091 0|0:241:213,0,1:213:8379:0,1:0,41:0,-64.1194,-753.355,-60.7348,-749.971,-749.67 dDocent_Contig_8108 27 . G A 134.651 . AB=0.272727;ABP=12.8806;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=137;DPB=137;DPRA=0.956522;EPP=16.0391;EPPR=287.473;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=236;QR=5136;RO=131;RPL=0;RPP=16.0391;RPPR=287.473;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=131;SRP=287.473;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1299:0:0:0,-9.93399,-117.174 0/0:45:45,0:45:1740:0:0:0,-13.5463,-156.82 0/0:17:17,0:17:680:0:0:0,-5.11751,-61.5291 0/0:18:18,0:18:713:0:0:0,-5.41854,-64.4966 0/0:2:2,0:2:82:0:0:0,-0.60206,-7.77968 0/1:22:16,6:16:622:6:236:-14.9878,0,-49.6848 dDocent_Contig_8109 7 . G T 11099.9 . AB=0.431034;ABP=19.7831;AC=6;AF=0.5;AN=12;AO=380;CIGAR=1X;DP=674;DPB=674;DPRA=0;EPP=828.17;EPPR=630.566;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=14194;QR=9078;RO=289;RPL=0;RPP=828.17;RPPR=630.566;RPR=380;RUN=1;SAF=380;SAP=828.17;SAR=0;SRF=289;SRP=630.566;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:51,3:51:1467:3:33:0,-13.1756,-129.185 0/1:81:65,15:65:2031:15:493:-20.4584,0,-158.824 0/1:49:33,15:33:1053:15:559:-36.0669,0,-80.472 0/1:133:109,23:109:3516:23:812:-33.5186,0,-276.742 1/1:214:12,202:12:405:202:7683:-654.543,-27.6546,0 0/1:143:19,122:19:606:122:4614:-372.627,0,-12.1349 dDocent_Contig_8110 9 . T C 839.901 . AB=0.307692;ABP=44.7694;AC=1;AF=0.0833333;AN=12;AO=44;CIGAR=1X;DP=431;DPB=431;DPRA=2.35354;EPP=98.5551;EPPR=843.37;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.860465;PAO=0;PQA=0;PQR=0;PRO=0;QA=1516;QR=13378;RO=387;RPL=0;RPP=98.5551;RPPR=843.37;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=387;SRP=843.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:51:51,0:51:1758:0:0:0,-15.3525,-158.472 0/0:86:86,0:86:3022:0:0:0,-25.8886,-272.163 0/0:103:99,4:99:3461:4:134:0,-18.6182,-299.255 0/1:130:90,40:90:2977:40:1382:-85.5129,0,-228.976 0/0:52:52,0:52:1833:0:0:0,-15.6536,-165.227 0/0:9:9,0:9:327:0:0:0,-2.70927,-29.7739 dDocent_Contig_8111 11 . T A 493.169 . AB=0.275;ABP=38.1882;AC=1;AF=0.0833333;AN=12;AO=23;CIGAR=1X;DP=350;DPB=350;DPRA=1.36538;EPP=52.9542;EPPR=713.082;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=870;QR=12649;RO=327;RPL=0;RPP=52.9542;RPPR=713.082;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=327;SRP=713.082;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:36,0:36:1364:0:0:0,-10.8371,-123.03 0/0:73:73,0:73:2784:0:0:0,-21.9752,-250.688 0/0:30:30,0:30:1149:0:0:0,-9.0309,-103.69 0/0:62:61,1:61:2367:1:41:0,-14.5693,-209.114 0/0:69:69,0:69:2737:0:0:0,-20.7711,-246.455 0/1:80:58,22:58:2248:22:829:-50.8397,0,-178.417 dDocent_Contig_8112 34 . T A 93.4716 . AB=0.307692;ABP=7.18621;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=85;DPB=85;DPRA=0.902778;EPP=11.6962;EPPR=178.9;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.888889;PAO=0;PQA=0;PQR=0;PRO=0;QA=160;QR=3275;RO=81;RPL=0;RPP=11.6962;RPPR=178.9;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=81;SRP=178.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:645:0:0:0,-4.81648,-58.3832 0/0:12:12,0:12:490:0:0:0,-3.61236,-44.4511 0/0:16:16,0:16:642:0:0:0,-4.81648,-58.1118 0/0:13:13,0:13:520:0:0:0,-3.91339,-47.1451 0/1:13:9,4:9:365:4:160:-10.87,0,-29.3017 0/0:15:15,0:15:613:0:0:0,-4.51545,-55.5068 dDocent_Contig_8113 19 . A G 4955.78 . AB=0.639216;ABP=45.9373;AC=6;AF=0.5;AN=12;AO=163;CIGAR=1X;DP=255;DPB=255;DPRA=0;EPP=356.96;EPPR=202.786;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.723926;PAIREDR=0.934783;PAO=0;PQA=0;PQR=0;PRO=0;QA=6465;QR=3604;RO=92;RPL=0;RPP=356.96;RPPR=202.786;RPR=163;RUN=1;SAF=163;SAP=356.96;SAR=0;SRF=92;SRP=202.786;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:44:7,37:7:276:37:1460:-118.406,0,-11.9635 0/1:59:18,41:18:716:41:1649:-130.876,0,-47.0077 0/1:50:19,31:19:732:31:1252:-97.8971,0,-51.1463 0/1:53:23,30:23:899:30:1148:-87.6386,0,-65.2658 0/1:14:11,3:11:422:3:117:-6.69487,0,-34.1127 0/1:35:14,21:14:559:21:839:-65.2881,0,-40.1174 dDocent_Contig_8114 19 . C T 39225.8 . AB=0.538302;ABP=33.7841;AC=6;AF=0.5;AN=12;AO=1300;CIGAR=1X;DP=2415;DPB=2415;DPRA=0;EPP=2825.92;EPPR=2422.03;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.993846;PAIREDR=0.964093;PAO=0;PQA=0;PQR=0;PRO=0;QA=51821;QR=44634;RO=1114;RPL=0;RPP=2825.92;RPPR=2422.03;RPR=1300;RUN=1;SAF=1300;SAP=2825.92;SAR=0;SRF=1114;SRP=2422.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:311:127,184:127:5040:184:7342:-566.786,0,-359.859 0/1:273:173,100:173:6929:100:3993:-277.17,0,-541.102 0/1:173:102,71:102:4060:71:2814:-201.299,0,-313.3 0/1:304:204,100:204:8173:100:3999:-268.377,0,-643.59 0/1:602:98,504:98:3968:504:20030:-1619.81,0,-175.868 0/1:752:410,341:410:16464:341:13643:-1000.37,0,-1253.92 dDocent_Contig_8115 32 . A T 36.2038 . AB=0.142857;ABP=26.2761;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=153;DPB=153;DPRA=0.795455;EPP=9.52472;EPPR=328.731;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.673333;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=5896;RO=150;RPL=0;RPP=9.52472;RPPR=328.731;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=150;SRP=328.731;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:740:0:0:0,-5.71957,-66.9233 0/0:21:21,0:21:812:0:0:0,-6.32163,-73.3911 0/0:33:33,0:33:1307:0:0:0,-9.93399,-117.9 0/0:33:33,0:33:1288:0:0:0,-9.93399,-116.188 0/1:21:18,3:18:722:3:123:-5.14316,0,-58.9849 0/0:26:26,0:26:1027:0:0:0,-7.82678,-92.724 dDocent_Contig_8116 34 . T C 78.9381 . AB=0.10989;ABP=123.3;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=250;DPB=250;DPRA=2.86164;EPP=24.725;EPPR=524.164;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.979167;PAO=0;PQA=0;PQR=0;PRO=0;QA=405;QR=8848;RO=240;RPL=0;RPP=24.725;RPPR=524.164;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=240;SRP=524.164;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:43:43,0:43:1596:0:0:0,-12.9443,-143.904 0/0:33:33,0:33:1240:0:0:0,-9.93399,-111.888 0/0:32:32,0:32:1211:0:0:0,-9.63296,-109.284 0/0:22:22,0:22:809:0:0:0,-6.62266,-73.1293 0/0:29:29,0:29:1052:0:0:0,-8.72987,-94.9845 0/1:91:81,10:81:2940:10:405:-9.41669,0,-237.377 dDocent_Contig_8117 27 . G A 6186.81 . AB=0.36407;ABP=103.958;AC=6;AF=0.5;AN=12;AO=229;CIGAR=8M1X5M;DP=629;DPB=617.214;DPRA=0;EPP=500.277;EPPR=784.74;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8977;QR=14069;RO=360;RPL=0;RPP=500.277;RPPR=784.74;RPR=229;RUN=1;SAF=229;SAP=500.277;SAR=0;SRF=360;SRP=784.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:94:52,7,1,0,32:52:2031:7,1,0,32:278,40,0,1235:-85.7489,-78.5172,-243.368,-98.1071,-242.18,-264.764,-101.402,-245.476,-265.065,-268.36,0,-144.065,-163.654,-166.95,-157.317 0|1:133:83,2,0,0,47:83:3240:2,0,0,47:73,0,0,1837:-126.054,-145.078,-410.813,-151.039,-411.416,-417.378,-151.039,-411.416,-417.378,-417.378,0,-260.396,-266.358,-266.358,-252.209 0|1:85:47,0,12,0,23:47:1825:0,12,0,23:0,441,0,905:-60.3097,-74.4581,-224.409,-38.4195,-188.367,-184.754,-74.4581,-224.409,-188.367,-224.409,0,-149.965,-113.923,-149.965,-143.041 0|1:135:90,2,1,0,40:90:3505:2,1,0,40:82,40,0,1576:-102.608,-122.932,-410.394,-126.405,-407.701,-414.168,-129.701,-410.996,-414.469,-417.765,0,-281.341,-284.814,-288.11,-276.068 0|1:62:30,0,0,5,26:30:1187:0,0,5,26:0,0,199,1028:-75.6073,-84.6382,-182.333,-84.6382,-182.333,-182.333,-68.25,-165.946,-165.946,-164.441,0,-97.7322,-97.7322,-81.3445,-89.9055 0|1:120:58,0,0,0,61:58:2281:0,0,0,61:0,0,0,2396:-179.575,-197.035,-384.664,-197.035,-384.664,-384.664,-197.035,-384.664,-384.664,-384.664,0,-187.613,-187.613,-187.613,-169.25 dDocent_Contig_8118 92 . A T 58.6465 . AB=0.176471;ABP=33.9218;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=88;DPB=88;DPRA=1.25926;EPP=16.0391;EPPR=181.071;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.97561;PAO=0;PQA=0;PQR=0;PRO=0;QA=207;QR=2767;RO=82;RPL=6;RPP=16.0391;RPPR=181.071;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=82;SRP=181.071;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:2:2,0:2:70:0:0:0,-0.60206,-6.6474 0/1:22:18,4:18:616:4:138:-6.13779,0,-49.1402 0/1:12:10,2:10:328:2:69:-2.9403,0,-26.2258 0/0:13:13,0:13:444:0:0:0,-3.91339,-40.2877 0/0:26:26,0:26:866:0:0:0,-7.82678,-78.247 0/0:13:13,0:13:443:0:0:0,-3.91339,-40.1964 dDocent_Contig_8119 31 . C G 1801.1 . AB=0.263158;ABP=141.87;AC=4;AF=0.333333;AN=12;AO=84;CIGAR=1M1X11M;DP=413;DPB=423.154;DPRA=0;EPP=185.414;EPPR=687.024;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.988095;PAIREDR=0.977778;PAO=0;PQA=0;PQR=0;PRO=0;QA=3320;QR=12368;RO=315;RPL=0;RPP=185.414;RPPR=687.024;RPR=84;RUN=1;SAF=84;SAP=185.414;SAR=0;SRF=315;SRP=687.024;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:41:38,0,3:38:1502:0,3:0,118:0,-11.4391,-135.042,-1.34065,-125.336,-124.433 0|1:53:41,0,12:41:1597:0,12:0,450:-24.8788,-37.221,-168.488,0,-131.645,-128.033 0|1:48:43,0,4:43:1686:0,4:0,164:-0.592032,-13.5363,-152.168,0,-138.63,-137.426 0|0:87:80,0,6:80:3153:0,6:0,232:0,-24.0824,-283.532,-4.77933,-264.483,-262.677 0|1:78:55,0,23:55:2163:0,23:0,918:-59.4444,-76.0011,-253.917,0,-178.313,-171.389 0|1:106:58,12,36:58:2267:12,36:434,1438:-101.006,-83.0602,-265.816,0,-150.988,-175.56 dDocent_Contig_8120 181 . A T 185.015 . AB=0.208333;ABP=38.4777;AC=3;AF=0.25;AN=12;AO=11;CIGAR=1X3M;DP=94;DPB=94;DPRA=1.63636;EPP=26.8965;EPPR=178.9;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.975309;PAO=0;PQA=0;PQR=0;PRO=0;QA=426;QR=3112;RO=81;RPL=11;RPP=26.8965;RPPR=178.9;RPR=0;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=178.9;SRR=81;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:22:15,0,7:15:564:0,7:0,274:-18.4051,-22.9206,-69.1162,0,-46.5818,-44.4745 0|0:20:20,0,0:20:776:0,0:0,0:0,-6.0206,-70.1647,-6.0206,-70.1647,-70.1647 0|1:11:10,0,1:10:395:0,1:0,39:-0.585235,-3.59553,-36.1043,0,-32.8989,-32.5978 0|0:24:23,0,1:23:883:0,1:0,40:0,-6.92369,-79.3854,-3.22904,-76.0897,-75.7886 0|0:2:2,0,0:2:77:0,0:0,0:0,-0.60206,-7.30883,-0.60206,-7.30883,-7.30883 0|1:15:11,2,2:11:417:2,2:80,73:-3.29625,0,-33.5977,-0.661717,-28.2387,-34.23 dDocent_Contig_8121 80 . G A 113.914 . AB=0.151899;ABP=86.1585;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=235;DPB=235;DPRA=1.52586;EPP=39.9253;EPPR=476.391;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=597;QR=7400;RO=218;RPL=17;RPP=39.9253;RPPR=476.391;RPR=0;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=218;SRP=476.391;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:55:55,0:55:1869:0:0:0,-16.5566,-168.487 0/0:40:38,2:38:1315:2:70:0,-5.39387,-112.005 0/1:47:40,7:40:1344:7:241:-7.87744,0,-107.104 0/0:58:55,3:55:1852:3:108:0,-7.38457,-156.881 0/0:3:3,0:3:105:0:0:0,-0.90309,-9.79616 0/1:32:27,5:27:915:5:178:-6.73569,0,-73.0253 dDocent_Contig_8123 28 . G C 154.328 . AB=0.176471;ABP=49.3776;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=210;DPB=210;DPRA=1.60377;EPP=22.5536;EPPR=439.476;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.666667;PAIREDR=0.681592;PAO=0;PQA=0;PQR=0;PRO=0;QA=355;QR=8051;RO=201;RPL=0;RPP=22.5536;RPPR=439.476;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=201;SRP=439.476;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:992:0:0:0,-7.52575,-89.5783 0/1:51:42,9:42:1687:9:355:-16.9557,0,-136.698 0/0:20:20,0:20:802:0:0:0,-6.0206,-72.4961 0/0:31:31,0:31:1254:0:0:0,-9.33193,-113.128 0/0:45:45,0:45:1784:0:0:0,-13.5463,-160.774 0/0:38:38,0:38:1532:0:0:0,-11.4391,-138.117 dDocent_Contig_8124 44 . C T 12850.9 . AB=0.54644;ABP=15.1114;AC=7;AF=0.583333;AN=12;AO=416;CIGAR=1X;DP=709;DPB=709;DPRA=0;EPP=906.343;EPPR=639.252;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=16534;QR=11616;RO=293;RPL=0;RPP=906.343;RPPR=639.252;RPR=416;RUN=1;SAF=416;SAP=906.343;SAR=0;SRF=293;SRP=639.252;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:165:66,99:66:2648:99:3933:-304.308,0,-188.777 0/1:91:65,26:65:2534:26:1050:-67.3974,0,-200.815 0/1:101:66,35:66:2628:35:1397:-95.5792,0,-206.25 0/1:102:60,42:60:2380:42:1652:-118.209,0,-183.638 1/1:63:0,63:0:0:63:2511:-226.13,-18.9649,0 0/1:187:36,151:36:1426:151:5991:-482.689,0,-72.298 dDocent_Contig_8125 75 . T G 309.305 . AB=0.209524;ABP=79.9631;AC=3;AF=0.25;AN=12;AO=28;CIGAR=1X;DP=294;DPB=294;DPRA=0.704615;EPP=3.32051;EPPR=580.622;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0714286;PAIREDR=0.924812;PAO=0;PQA=0;PQR=0;PRO=0;QA=943;QR=9291;RO=266;RPL=28;RPP=63.8115;RPPR=580.622;RPR=0;RUN=1;SAF=15;SAP=3.32051;SAR=13;SRF=266;SRP=580.622;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:29:19,10:19:651:10:340:-22.1999,0,-50.1819 0/0:61:57,4:57:1960:4:135:0,-5.87938,-164.196 0/1:24:18,6:18:635:6:209:-11.9261,0,-50.2522 0/0:65:65,0:65:2281:0:0:0,-19.5669,-205.554 0/0:63:61,2:61:2141:2:71:0,-12.2228,-186.216 0/1:52:46,6:46:1623:6:188:-1.57418,0,-130.706 dDocent_Contig_8126 14 . A G 172.943 . AB=0.461538;ABP=3.17734;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=102;DPB=102;DPRA=1.70909;EPP=12.7819;EPPR=207.129;GTI=0;LEN=1;MEANALT=1;MQM=56;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=308;QR=3740;RO=94;RPL=0;RPP=20.3821;RPPR=207.129;RPR=8;RUN=1;SAF=7;SAP=12.7819;SAR=1;SRF=94;SRP=207.129;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:13:7,6:7:282:6:245:-18.5161,0,-21.8387 0/0:8:8,0:8:309:0:0:0,-2.40824,-28.1679 0/0:3:3,0:3:123:0:0:0,-0.90309,-11.4648 0/0:26:26,0:26:1031:0:0:0,-7.82678,-93.0818 0/0:18:18,0:18:717:0:0:0,-5.41854,-64.8573 0/0:34:32,2:32:1278:2:63:0,-4.31884,-109.37 dDocent_Contig_8127 14 . T G 1391.24 . AB=0.0416667;ABP=90.593;AC=0;AF=0;AN=12;AO=9;CIGAR=3M1X1M;DP=452;DPB=497;DPRA=0;EPP=22.5536;EPPR=802.112;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=59.9864;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.98913;PAO=0;PQA=0;PQR=0;PRO=0;QA=359;QR=14175;RO=368;RPL=0;RPP=22.5536;RPPR=802.112;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=368;SRP=802.112;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:32:22,10,0:22:851:10,0:385,0:-25.3723,0,-67.2674,-31.995,-70.2777,-101.887 0|0:62:58,0,4:58:2237:0,4:0,156:0,-17.4597,-201.139,-4.24745,-188.316,-187.112 0|0:48:40,6,2:40:1551:6,2:234,81:-7.17964,0,-125.584,-12.5379,-120.71,-139.34 0|0:96:91,2,3:91:3490:2,3:76,122:0,-21.1713,-306.971,-17.3146,-297.509,-302.839 0|0:103:77,26,0:77:2969:26,0:899,0:-50.1891,0,-236.351,-73.3684,-244.178,-317.191 0|0:111:80,31,0:80:3077:31,0:1075,0:-63.6052,0,-243.652,-87.6876,-252.984,-340.314 dDocent_Contig_8128 107 . N A 321.499 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=12;CIGAR=1X;DP=12;DPB=12;DPRA=0;EPP=29.068;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=343;QR=0;RO=0;RPL=0;RPP=29.068;RPPR=0;RPR=12;RUN=1;SAF=0;SAP=29.068;SAR=12;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:42:-3.9887,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:7:0,7:0:0:7:212:-19.3785,-2.10721,0 1/1:3:0,3:0:0:3:89:-8.30497,-0.90309,0 dDocent_Contig_8129 11 . T A 381.988 . AB=0.32;ABP=17.0814;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X2M3X;DP=554;DPB=554;DPRA=2.79459;EPP=50.7827;EPPR=1149.55;GTI=0;LEN=1;MEANALT=1.6;MQM=50.2273;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=860;QR=20412;RO=528;RPL=0;RPP=50.7827;RPPR=1149.55;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=528;SRP=1149.55;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:11:1,10:1:40:10:392:-31.4702,0,-0.684349 0|1:39:32,6:32:1247:6:227:-8.63085,0,-100.689 0|0:37:37,0:37:1437:0:0:0,-11.1381,-129.596 0|0:14:13,1:13:496:1:40:0,-0.218741,-40.9875 0|0:197:193,3:193:7470:3:121:0,-48.1295,-660.785 0|0:256:252,2:252:9722:2:80:0,-69.2644,-866.977 dDocent_Contig_8130 14 . C T 2276.91 . AB=0.545455;ABP=5.57659;AC=6;AF=0.5;AN=12;AO=78;CIGAR=1X;DP=143;DPB=143;DPRA=0;EPP=172.385;EPPR=144.156;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.876923;PAO=0;PQA=0;PQR=0;PRO=0;QA=3110;QR=2616;RO=65;RPL=0;RPP=172.385;RPPR=144.156;RPR=78;RUN=1;SAF=78;SAP=172.385;SAR=0;SRF=65;SRP=144.156;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:5,7:5:201:7:271:-21.1382,0,-14.8585 0/1:35:9,26:9:359:26:1038:-83.1774,0,-22.1358 0/1:28:7,21:7:284:21:848:-68.203,0,-17.5052 0/1:26:19,7:19:759:7:273:-17.1077,0,-60.8048 0/1:19:11,8:11:444:8:324:-23.8093,0,-34.5964 0/1:23:14,9:14:569:9:356:-25.4769,0,-44.6286 dDocent_Contig_8131 13 . T C 1723.58 . AB=0.105769;ABP=143.404;AC=6;AF=0.5;AN=12;AO=11;CIGAR=1X3M;DP=182;DPB=182;DPRA=0;EPP=26.8965;EPPR=228.843;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=396;QR=3900;RO=104;RPL=0;RPP=26.8965;RPPR=228.843;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=104;SRP=228.843;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:19:12,5,2:12:446:5,2:197,49:-12.7011,0,-35.1032,-12.553,-32.8234,-48.435 0|1:30:13,17,0:13:490:17,0:671,0:-51.6932,0,-35.4136,-55.6065,-40.5311,-95.7533 0|1:13:7,6,0:7:262:6,0:227,0:-16.8765,0,-20.0238,-18.9837,-21.83,-40.4375 0|1:41:21,16,4:21:786:16,4:634,148:-45.8829,0,-59.5566,-40.1052,-52.2692,-103.258 0|1:44:27,12,5:27:1013:12,5:474,199:-30.8721,0,-79.3482,-22.6134,-66.5714,-104.074 0|1:35:24,10,0:24:903:10,0:398,0:-25.5543,0,-70.9597,-32.779,-73.97,-106.748 dDocent_Contig_8132 84 . T C 191.278 . AB=0.188406;ABP=61.1995;AC=3;AF=0.25;AN=12;AO=19;CIGAR=1X;DP=175;DPB=175;DPRA=1.0963;EPP=44.2683;EPPR=339.589;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.736842;PAIREDR=0.858065;PAO=0;PQA=0;PQR=0;PRO=0;QA=649;QR=5416;RO=155;RPL=19;RPP=44.2683;RPPR=339.589;RPR=0;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=155;SRP=339.589;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:21,4:21:706:4:144:-5.78778,0,-56.3263 0/1:21:19,2:19:656:2:68:-0.136079,0,-53.0409 0/1:23:16,7:16:530:7:257:-16.5603,0,-41.0882 0/0:44:39,5:39:1380:5:143:0,-0.0936303,-111.342 0/0:35:33,1:33:1198:1:37:0,-6.78708,-104.541 0/0:27:27,0:27:946:0:0:0,-8.12781,-85.4524 dDocent_Contig_8133 16 . T G 1252.53 . AB=0.694915;ABP=22.4799;AC=1;AF=0.0833333;AN=12;AO=45;CIGAR=1X;DP=294;DPB=294;DPRA=1.34091;EPP=100.727;EPPR=539.364;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1765;QR=9762;RO=247;RPL=0;RPP=100.727;RPPR=539.364;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=247;SRP=539.364;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:356:0:0:0,-2.70927,-32.3997 0/0:45:45,0:45:1747:0:0:0,-13.5463,-157.46 0/0:46:46,0:46:1818:0:0:0,-13.8474,-163.834 0/0:76:75,0:75:2987:0:0:0,-22.5772,-268.519 0/0:59:55,4:55:2176:4:162:0,-2.79402,-181.053 0/1:59:17,41:17:678:41:1603:-126.776,0,-43.6136 dDocent_Contig_8134 39 . G A 865.98 . AB=0.0979021;ABP=203.834;AC=4;AF=0.333333;AN=12;AO=17;CIGAR=1X3M;DP=280;DPB=280;DPRA=1.58088;EPP=18.4661;EPPR=480.734;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.764706;PAIREDR=0.690909;PAO=0;PQA=0;PQR=0;PRO=0;QA=680;QR=8540;RO=220;RPL=3;RPP=18.4661;RPPR=480.734;RPR=14;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=220;SRP=480.734;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:27:20,2,4:20:757:2,4:74,156:-6.8036,-6.77794,-68.2129,0,-55.993,-60.8411 0|1:56:41,9,5:41:1595:9,5:353,204:-16.6774,0,-128.349,-12.1836,-114.225,-141.75 0|1:31:22,9,0:22:862:9,0:354,0:-22.8891,0,-68.5647,-29.5117,-71.274,-100.393 0|1:60:36,19,5:36:1379:19,5:712,203:-47.4497,0,-107.418,-41.5379,-96.392,-153.195 0|0:34:34,0,0:34:1323:0,0:0,0:0,-10.235,-119.347,-10.235,-119.347,-119.347 0|0:72:67,2,3:67:2624:2,3:81,117:0,-13.4839,-228.647,-10.5608,-219.632,-225.408 dDocent_Contig_8135 12 . T C 763.584 . AB=0.169291;ABP=244.3;AC=1;AF=0.0833333;AN=12;AO=43;CIGAR=1X;DP=1221;DPB=1221;DPRA=1.31334;EPP=96.3836;EPPR=2556.66;GTI=0;LEN=1;MEANALT=3;MQM=59.9302;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992347;PAO=0;PQA=0;PQR=0;PRO=0;QA=1710;QR=43990;RO=1176;RPL=0;RPP=96.3836;RPPR=2556.66;RPR=43;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=1176;SRP=2556.66;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:136:136,0:136:5013:0:0:0,-40.9401,-451.191 0/0:187:187,0:187:7031:0:0:0,-56.2926,-632.657 0/0:199:199,0:199:7405:0:0:0,-59.905,-666.291 0/0:194:194,0:194:7286:0:0:0,-58.3998,-655.576 0/0:251:251,0:251:9477:0:0:0,-75.5585,-852.61 0/1:254:209,43:209:7778:43:1710:-77.8813,0,-623.575 dDocent_Contig_8136 27 . T A 952.299 . AB=0.28;ABP=66.0699;AC=6;AF=0.5;AN=12;AO=42;CIGAR=1X;DP=150;DPB=150;DPRA=0;EPP=94.2121;EPPR=237.529;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.690476;PAIREDR=0.768519;PAO=0;PQA=0;PQR=0;PRO=0;QA=1660;QR=4294;RO=108;RPL=0;RPP=94.2121;RPPR=237.529;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=108;SRP=237.529;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:7:4,3:4:154:3:119:-8.9878,0,-12.1222 0/1:23:14,9:14:558:9:365:-26.2914,0,-43.6345 0/1:24:20,4:20:795:4:158:-7.37525,0,-64.6428 0/1:43:36,7:36:1435:7:269:-11.6243,0,-116.456 0/1:29:18,11:18:707:11:433:-30.5924,0,-55.2243 0/1:24:16,8:16:645:8:316:-21.5807,0,-51.1568 dDocent_Contig_8137 9 . A G 225.486 . AB=0.15625;ABP=134.384;AC=2;AF=0.166667;AN=12;AO=44;CIGAR=1X2M1X1M1X;DP=576;DPB=576;DPRA=0;EPP=98.5551;EPPR=1158.23;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.931818;PAIREDR=0.988722;PAO=0;PQA=0;PQR=0;PRO=0;QA=1550;QR=19762;RO=532;RPL=0;RPP=98.5551;RPPR=1158.23;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=532;SRP=1158.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:53:43,10:43:1597:10:366:-17.3302,0,-128.04 0|0:134:124,10:124:4617:10:348:0,-8.6855,-383.932 0|1:75:65,10:65:2412:10:341:-8.44028,0,-194.709 0|0:122:115,7:115:4269:7:248:0,-14.0656,-361.626 0|0:67:64,3:64:2360:3:98:0,-11.0248,-203.471 0|0:125:121,4:121:4507:4:149:0,-23.8552,-391.919 dDocent_Contig_8138 27 . C G 5533.73 . AB=0.290743;ABP=294.732;AC=6;AF=0.5;AN=12;AO=223;CIGAR=1X;DP=767;DPB=767;DPRA=0;EPP=487.249;EPPR=1182.12;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996317;PAO=0;PQA=0;PQR=0;PRO=0;QA=8820;QR=21549;RO=543;RPL=0;RPP=487.249;RPPR=1182.12;RPR=223;RUN=1;SAF=223;SAP=487.249;SAR=0;SRF=543;SRP=1182.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:118:97,21:97:3839:21:816:-38.2256,0,-310.001 0/1:152:99,53:99:3878:53:2122:-145.399,0,-303.258 0/1:82:73,9:73:2916:9:366:-8.6207,0,-237.857 0/1:181:161,19:161:6421:19:762:-14.6115,0,-523.357 0/1:104:62,42:62:2456:42:1623:-115.001,0,-189.876 0/1:130:51,79:51:2039:79:3131:-242.737,0,-144.562 dDocent_Contig_8139 57 . C A 302.149 . AB=0.407407;ABP=5.02092;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=119;DPB=119;DPRA=2.10345;EPP=29.068;EPPR=235.358;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.962617;PAO=0;PQA=0;PQR=0;PRO=0;QA=480;QR=4189;RO=107;RPL=12;RPP=29.068;RPPR=235.358;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=107;SRP=235.358;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:5:5,0:5:191:0:0:0,-1.50515,-17.5554 0/0:18:18,0:18:724:0:0:0,-5.41854,-65.4848 0/0:18:18,0:18:717:0:0:0,-5.41854,-64.8546 0/0:17:17,0:17:633:0:0:0,-5.11751,-57.2829 0/0:34:33,1:33:1294:1:41:0,-6.14045,-112.629 0/1:27:16,11:16:630:11:439:-31.7378,0,-48.9027 dDocent_Contig_8142 13 . T C 41490.9 . AB=0.400641;ABP=324.054;AC=6;AF=0.5;AN=12;AO=1500;CIGAR=1X;DP=3744;DPB=3744;DPRA=0;EPP=3234.21;EPPR=4864.94;GTI=0;LEN=1;MEANALT=1.5;MQM=58.988;MQMR=59.9558;NS=6;NUMALT=1;ODDS=0;PAIRED=0.836667;PAIREDR=0.974989;PAO=0;PQA=0;PQR=0;PRO=0;QA=59309;QR=87397;RO=2239;RPL=0;RPP=3260.22;RPPR=4864.94;RPR=1500;RUN=1;SAF=1497;SAP=3234.21;SAR=3;SRF=2239;SRP=4864.94;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:588:372,216:372:14457:216:8543:-588.759,0,-1123.23 0/1:921:581,340:581:22612:340:13436:-916.493,0,-1752.07 0/1:440:274,166:274:10776:166:6593:-458.684,0,-836.769 0/1:792:446,345:446:17385:345:13623:-980.987,0,-1324.93 0/1:446:232,212:232:9046:212:8391:-608.877,0,-679.766 0/1:557:334,221:334:13121:221:8723:-606.514,0,-1012.7 dDocent_Contig_8143 8 . T A 47.8972 . AB=0.115942;ABP=91.4113;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=447;DPB=447;DPRA=0.961039;EPP=37.7539;EPPR=938.915;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.4965;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.886311;PAO=0;PQA=0;PQR=0;PRO=0;QA=563;QR=13368;RO=431;RPL=0;RPP=37.7539;RPPR=938.915;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=431;SRP=938.915;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:56:55,1:55:1713:1:17:0,-15.1577,-152.718 0/1:69:61,8:61:1932:8:297:-6.31259,0,-153.344 0/0:84:81,3:81:2586:3:116:0,-14.4688,-222.135 0/0:77:77,0:77:2442:0:0:0,-23.1793,-219.97 0/0:55:52,3:52:1487:3:94:0,-7.78857,-122.399 0/0:106:105,1:105:3208:1:39:0,-28.0126,-284.299 dDocent_Contig_8144 103 . N A 5589.67 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=184;CIGAR=5X;DP=184;DPB=184;DPRA=0;EPP=402.561;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6190;QR=0;RO=0;RPL=0;RPP=402.561;RPPR=0;RPR=184;RUN=1;SAF=0;SAP=402.561;SAR=184;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1|1:4:0,4:0:0:4:138:-12.7604,-1.20412,0 1|1:80:0,80:0:0:80:2657:-239.381,-24.0824,0 1|1:99:0,99:0:0:99:3361:-302.727,-29.802,0 dDocent_Contig_8145 12 . A T 409.061 . AB=0.236559;ABP=59.0716;AC=2;AF=0.166667;AN=12;AO=24;CIGAR=1X;DP=274;DPB=274;DPRA=1.51471;EPP=55.1256;EPPR=545.878;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.876;PAO=0;PQA=0;PQR=0;PRO=0;QA=873;QR=9632;RO=250;RPL=0;RPP=55.1256;RPPR=545.878;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=250;SRP=545.878;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:820:0:0:0,-6.32163,-74.1186 0/0:47:47,0:47:1815:0:0:0,-14.1484,-163.574 0/1:47:38,9:38:1454:9:316:-14.6222,0,-116.965 0/0:61:60,1:60:2306:1:39:0,-14.4663,-203.821 0/0:52:51,1:51:1941:1:40:0,-11.6579,-170.897 0/1:46:33,13:33:1296:13:478:-29.5057,0,-103.063 dDocent_Contig_8146 30 . C G 231.636 . AB=0.145299;ABP=130.867;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=548;DPB=548;DPRA=0.745223;EPP=46.4397;EPPR=1130.07;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.979127;PAO=0;PQA=0;PQR=0;PRO=0;QA=783;QR=21017;RO=527;RPL=0;RPP=46.4397;RPPR=1147.38;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=525;SRP=1130.07;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:30,1:30:1204:1:40:0,-5.33625,-104.641 0/0:86:83,2:83:3293:2:81:0,-18.3096,-288.755 0/1:117:100,17:100:3998:17:662:-24.6865,0,-324.585 0/0:49:49,0:49:1954:0:0:0,-14.7505,-176.061 0/0:131:131,0:131:5232:0:0:0,-39.4349,-470.741 0/0:134:134,0:134:5336:0:0:0,-40.338,-480.101 dDocent_Contig_8147 125 . G C 435.015 . AB=0.275862;ABP=15.6647;AC=4;AF=0.333333;AN=12;AO=19;CIGAR=1X3M2X2M3D4M;DP=77;DPB=73.2;DPRA=1.04;EPP=44.2683;EPPR=128.956;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.473684;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=639;QR=1993;RO=58;RPL=0;RPP=44.2683;RPPR=128.956;RPR=19;RUN=1;SAF=0;SAP=44.2683;SAR=19;SRF=0;SRP=128.956;SRR=58;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:9:9,0:9:304:0:0:0,-2.70927,-27.6877 0|0:13:12,1:12:405:1:34:0,-0.514479,-33.3752 0|1:11:9,2:9:313:2:69:-3.24133,0,-25.1946 0|0:16:16,0:16:570:0:0:0,-4.81648,-51.633 1|1:10:0,10:0:0:10:330:-30.0195,-3.0103,0 0|1:18:12,6:12:401:6:206:-13.4582,0,-30.9912 dDocent_Contig_8148 12 . A C 5335.89 . AB=0.116667;ABP=156.171;AC=0;AF=0;AN=12;AO=14;CIGAR=4M1X;DP=493;DPB=542;DPRA=0;EPP=33.4109;EPPR=493.763;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.884956;PAO=0;PQA=0;PQR=0;PRO=0;QA=557;QR=7977;RO=226;RPL=0;RPP=33.4109;RPPR=493.763;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=226;SRP=493.763;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:42:19,21,0:19:640:21,0:659,0:-47.2749,0,-45.5771,-52.9945,-51.8987,-104.858 0|0:51:28,23,0:28:988:23,0:747,0:-52.1778,0,-73.8651,-60.6066,-80.7888,-141.058 0|0:60:19,39,0:19:691:39,0:1251,0:-95.1613,0,-44.793,-100.881,-56.5331,-157.322 0|0:108:22,84,0:22:779:84,0:2535,0:-196.229,0,-38.2663,-202.852,-63.5528,-266.311 0|0:120:56,48,14:56:1988:48,14:1531,557:-106.38,0,-147.486,-77.3579,-116.064,-235.118 0|0:112:82,28,0:82:2891:28,0:896,0:-47.5876,0,-227.053,-72.2721,-235.482,-307.653 dDocent_Contig_8149 26 . A T 548.694 . AB=0.25;ABP=57.2971;AC=3;AF=0.25;AN=12;AO=25;CIGAR=1X;DP=151;DPB=151;DPRA=1.96078;EPP=57.2971;EPPR=276.616;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.76;PAIREDR=0.714286;PAO=0;PQA=0;PQR=0;PRO=0;QA=990;QR=4898;RO=126;RPL=0;RPP=57.2971;RPPR=276.616;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=126;SRP=276.616;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:629:0:0:0,-4.81648,-56.9466 0/0:13:13,0:13:505:0:0:0,-3.91339,-45.7939 0/1:26:23,3:23:903:3:115:-2.89721,0,-73.7563 0/0:22:22,0:22:875:0:0:0,-6.62266,-79.0619 0/1:29:19,10:19:735:10:401:-27.7202,0,-57.7459 0/1:45:33,12:33:1251:12:474:-29.4648,0,-99.3041 dDocent_Contig_8150 61 . C T 399.738 . AB=0.118644;ABP=152.069;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=9M1X6M;DP=320;DPB=318.25;DPRA=0.820106;EPP=35.5824;EPPR=600.165;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=609;QR=10779;RO=275;RPL=15;RPP=35.5824;RPPR=600.165;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=275;SRP=600.165;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:35:32,2,0:32:1254:2,0:81,0:0,-2.94389,-105.461,-9.63296,-106.063,-112.742 0|1:64:54,0,9:54:2113:0,9:0,364:-13.7508,-30.0064,-203.725,0,-173.712,-171.003 0|0:91:85,6,0:85:3326:6,0:240,0:0,-5.41866,-277.463,-25.5875,-279.269,-299.039 0|0:37:33,2,1:33:1302:2,1:78,41:0,-3.52983,-110.048,-6.54578,-107.265,-113.375 0|0:39:27,11,0:27:1048:11,0:437,0:-27.8342,0,-82.7697,-35.962,-86.081,-122.057 0|1:54:44,3,5:44:1736:3,5:114,204:-3.60896,-7.50736,-149.451,0,-133.521,-141.364 dDocent_Contig_8151 18 . T C 1471.74 . AB=0.390071;ABP=17.8102;AC=4;AF=0.333333;AN=12;AO=56;CIGAR=1X;DP=374;DPB=374;DPRA=0.323077;EPP=124.613;EPPR=684.88;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996855;PAO=0;PQA=0;PQR=0;PRO=0;QA=2213;QR=12551;RO=318;RPL=0;RPP=124.613;RPPR=693.539;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=317;SRP=684.88;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:6,25:6:240:25:1004:-81.3247,0,-12.6426 0/1:37:29,8:29:1153:8:312:-17.3037,0,-92.9101 0/1:29:22,7:22:876:7:278:-16.66,0,-70.4192 0/1:44:29,15:29:1151:15:578:-39.1076,0,-90.6227 0/0:90:89,1:89:3496:1:41:0,-22.9981,-310.599 0/0:143:143,0:143:5635:0:0:0,-43.0473,-506.968 dDocent_Contig_8152 8 . G A 243.484 . AB=0.22;ABP=37.059;AC=3;AF=0.25;AN=12;AO=14;CIGAR=1M2X;DP=171;DPB=171;DPRA=0.959596;EPP=33.4109;EPPR=300.502;GTI=0;LEN=1;MEANALT=3.33333;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=518;QR=4439;RO=137;RPL=0;RPP=33.4109;RPPR=300.502;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=137;SRP=300.502;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:10:8,0,2,0,0:8:268:0,2,0,0:0,76,0,0:-4.20451,-6.61275,-28.2775,0,-22.0355,-21.4334,-6.61275,-28.2775,-22.0355,-28.2775,-6.61275,-28.2775,-22.0355,-28.2775,-28.2775 0|0:45:44,0,0,0,1:44:1413:0,0,0,1:0,0,0,29:0,-13.2453,-127.144,-13.2453,-127.144,-127.144,-13.2453,-127.144,-127.144,-127.144,-10.6467,-124.836,-124.836,-124.836,-124.535 0|1:18:14,0,0,3,1:14:453:0,0,3,1:0,0,110,23:-4.87894,-9.09336,-45.6276,-9.09336,-45.6276,-45.6276,0,-36.6284,-36.6284,-35.7253,-7.35858,-43.8643,-43.8643,-34.8657,-43.5633 0|0:21:20,0,0,0,1:20:660:0,0,0,1:0,0,0,11:0,-6.0206,-59.5826,-6.0206,-59.5826,-59.5826,-6.0206,-59.5826,-59.5826,-59.5826,-5.22163,-58.9041,-58.9041,-58.9041,-58.6031 0|0:45:38,0,0,3,3:38:1208:0,0,3,3:0,0,110,39:0,-11.4391,-108.731,-11.4391,-108.731,-108.731,-2.36153,-99.7358,-99.7358,-98.8327,-8.92326,-106.137,-106.137,-97.1422,-105.234 0|1:32:13,3,6,8,1:13:437:3,6,8,1:115,233,298,11:-20.4863,-15.0118,-49.4964,-5.243,-31.2437,-38.827,0,-25.9969,-16.2269,-32.9784,-23.7248,-49.7191,-39.9536,-34.7079,-58.805 dDocent_Contig_8153 39 . T C 100.517 . AB=0.125;ABP=90.9549;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=189;DPB=189;DPRA=1.17241;EPP=24.725;EPPR=389.532;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.921348;PAO=0;PQA=0;PQR=0;PRO=0;QA=369;QR=5612;RO=178;RPL=0;RPP=24.725;RPPR=389.532;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=178;SRP=389.532;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:29,1:29:912:1:8:0,-8.2309,-81.5668 0/0:20:19,0:19:582:0:0:0,-5.71957,-52.5717 0/0:38:38,0:38:1212:0:0:0,-11.4391,-109.359 0/0:29:29,0:29:893:0:0:0,-8.72987,-80.659 0/1:22:17,5:17:526:5:198:-11.5738,0,-41.0091 0/1:50:46,4:46:1487:4:163:-0.00692765,0,-119.061 dDocent_Contig_8154 13 . C T 42.9257 . AB=0.1875;ABP=16.582;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=117;DPB=117;DPRA=0.792079;EPP=9.52472;EPPR=250.558;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=8.67362e-19;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=114;QR=4520;RO=114;RPL=0;RPP=9.52472;RPPR=250.558;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=114;SRP=250.558;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:3:3,0:3:122:0:0:0,-0.90309,-11.3725 0/0:53:53,0:53:2106:0:0:0,-15.9546,-189.729 0/0:10:10,0:10:380:0:0:0,-3.0103,-34.5451 0/0:7:7,0:7:278:0:0:0,-2.10721,-25.3904 0/0:28:28,0:28:1114:0:0:0,-8.42884,-100.547 0/1:16:13,3:13:520:3:114:-5.81533,0,-42.331 dDocent_Contig_8155 32 . G A 51.7261 . AB=0.214286;ABP=12.937;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=434;DPB=434;DPRA=0.669231;EPP=22.5536;EPPR=925.886;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.555556;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=358;QR=16742;RO=425;RPL=0;RPP=22.5536;RPPR=925.886;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=425;SRP=925.886;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:84:84,0:84:3273:0:0:0,-25.2865,-294.64 0/0:50:50,0:50:1986:0:0:0,-15.0515,-178.943 0/0:126:126,0:126:4945:0:0:0,-37.9298,-444.94 0/0:81:77,4:77:3068:4:161:0,-9.50794,-261.328 0/0:79:77,2:77:3042:2:80:0,-16.1896,-266.286 0/1:14:11,3:11:428:3:117:-6.69549,0,-34.6578 dDocent_Contig_8156 9 . T C 2274.91 . AB=0.314607;ABP=29.5803;AC=4;AF=0.333333;AN=12;AO=75;CIGAR=1X1M2X;DP=364;DPB=364;DPRA=0.603524;EPP=165.871;EPPR=604.508;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2852;QR=9288;RO=277;RPL=0;RPP=165.871;RPPR=604.508;RPR=75;RUN=1;SAF=75;SAP=165.871;SAR=0;SRF=277;SRP=604.508;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:63:62,0,0:62:2100:0,0:0,0:0,-18.6639,-189.016,-18.6639,-189.016,-189.016 0|0:82:79,0,2:79:2619:0,2:0,22:0,-23.7814,-235.814,-22.4034,-234.441,-233.839 0|1:30:17,12,1:17:562:12,1:460,19:-32.8162,0,-41.9596,-36.5396,-44.1709,-81.6471 0|0:82:77,0,5:77:2630:0,5:0,93:0,-23.1793,-236.721,-16.1287,-229.865,-228.36 1|1:48:0,47,0:0:0:47,0:1788,0:-160.786,-14.1484,0,-160.786,-14.1484,-160.786 0|1:59:42,16,1:42:1377:16,1:604,11:-37.1104,0,-106.632,-49.0804,-110.764,-159.979 dDocent_Contig_8157 18 . T C 687.194 . AB=0.423729;ABP=5.99147;AC=2;AF=0.166667;AN=12;AO=25;CIGAR=1X;DP=142;DPB=142;DPRA=1.42169;EPP=57.2971;EPPR=257.073;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=989;QR=4185;RO=117;RPL=0;RPP=57.2971;RPPR=257.073;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=117;SRP=257.073;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:786:0:0:0,-6.62266,-71.0531 0/0:30:30,0:30:1049:0:0:0,-9.0309,-94.7035 0/0:28:28,0:28:1048:0:0:0,-8.42884,-94.6206 0/1:24:8,16:8:293:16:625:-49.3534,0,-19.4949 0/0:3:3,0:3:112:0:0:0,-0.90309,-10.4465 0/1:35:26,9:26:897:9:364:-22.5878,0,-70.4917 dDocent_Contig_8158 1 . N G 260.139 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=10.7656;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0.857143;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=270;QR=0;RO=0;RPL=0;RPP=18.2106;RPPR=0;RPR=7;RUN=1;SAF=6;SAP=10.7656;SAR=1;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:78:-7.40347,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:157:-14.5088,-1.20412,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_8159 68 . C A 144.747 . AB=0.107438;ABP=812.826;AC=1;AF=0.0833333;AN=12;AO=148;CIGAR=1X;DP=3700;DPB=3700;DPRA=0.795962;EPP=324.388;EPPR=7703.05;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0.797297;PAIREDR=0.702764;PAO=0;PQA=0;PQR=0;PRO=0;QA=5006;QR=122068;RO=3546;RPL=148;RPP=324.388;RPPR=7703.05;RPR=0;RUN=1;SAF=148;SAP=324.388;SAR=0;SRF=3546;SRP=7703.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:605:540,65:540:18298:65:2195:-15.6965,0,-1464.46 0/0:624:602,21:602:20429:21:682:0,-125.959,-1776.62 0/0:553:506,47:506:17625:47:1617:0,-20.6559,-1440.11 0/0:668:656,10:656:22652:10:338:0,-169.98,-2007.45 0/0:507:502,5:502:17529:5:174:0,-136.62,-1561.29 0/0:743:740,0:740:25535:0:0:0,-222.762,-2297.27 dDocent_Contig_8160 181 . T C 222.435 . AB=0.11284;ABP=337.611;AC=2;AF=0.2;AN=10;AO=49;CIGAR=1X;DP=552;DPB=552;DPRA=5.05769;EPP=109.412;EPPR=1095.26;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1932;QR=20032;RO=503;RPL=49;RPP=109.412;RPPR=1095.26;RPR=0;RUN=1;SAF=0;SAP=109.412;SAR=49;SRF=0;SRP=1095.26;SRR=503;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:129:113,16:113:4556:16:613:-16.6599,0,-371.114 0/0:161:148,13:148:5882:13:521:0,-1.22841,-481.926 0/0:108:101,7:101:3997:7:275:0,-7.3942,-334.605 0/1:128:115,13:115:4558:13:523:-8.88457,0,-371.612 0/0:26:26,0:26:1039:0:0:0,-7.82678,-93.7989 ./.:.:.:.:.:.:.:. dDocent_Contig_8161 12 . T C 1678.15 . AB=0.470588;ABP=4.03217;AC=4;AF=0.333333;AN=12;AO=67;CIGAR=1X;DP=248;DPB=248;DPRA=2.05455;EPP=148.499;EPPR=396.047;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.522388;PAIREDR=0.950276;PAO=0;PQA=0;PQR=0;PRO=0;QA=2501;QR=6546;RO=181;RPL=0;RPP=148.499;RPPR=396.047;RPR=67;RUN=1;SAF=67;SAP=148.499;SAR=0;SRF=181;SRP=396.047;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:11,19:11:386:19:717:-55.8247,0,-26.0382 0/1:50:32,18:32:1174:18:673:-45.8421,0,-90.9074 0/0:22:22,0:22:812:0:0:0,-6.62266,-73.4018 0/1:17:10,7:10:358:7:268:-19.3663,0,-27.4428 0/1:39:19,20:19:692:20:727:-54.0036,0,-50.8621 0/0:90:87,3:87:3124:3:116:0,-16.2752,-270.527 dDocent_Contig_8162 159 . G A 506.754 . AB=0.408163;ABP=6.59988;AC=3;AF=0.25;AN=12;AO=20;CIGAR=1X;DP=76;DPB=76;DPRA=1.81481;EPP=46.4397;EPPR=124.613;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.875;PAO=0;PQA=0;PQR=0;PRO=0;QA=773;QR=2193;RO=56;RPL=20;RPP=46.4397;RPPR=124.613;RPR=0;RUN=1;SAF=0;SAP=46.4397;SAR=20;SRF=0;SRP=124.613;SRR=56;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:11:11,0:11:432:0:0:0,-3.31133,-39.2312 0/1:15:7,8:7:272:8:295:-22.3696,0,-20.3232 0/1:19:14,5:14:553:5:193:-12.0186,0,-44.3918 0/1:15:8,7:8:324:7:285:-21.509,0,-25.0134 0/0:11:11,0:11:407:0:0:0,-3.31133,-36.9644 0/0:5:5,0:5:205:0:0:0,-1.50515,-18.835 dDocent_Contig_8163 33 . A G 35.5792 . AB=0.129032;ABP=40.0654;AC=2;AF=0.166667;AN=12;AO=4;CIGAR=1X;DP=115;DPB=115;DPRA=0.738095;EPP=11.6962;EPPR=244.044;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.837838;PAO=0;PQA=0;PQR=0;PRO=0;QA=164;QR=4407;RO=111;RPL=0;RPP=11.6962;RPPR=244.044;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=111;SRP=244.044;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:592:0:0:0,-4.51545,-53.6157 0/1:22:20,2:20:796:2:82:-1.15702,0,-65.3331 0/1:9:7,2:7:284:2:82:-5.07041,0,-23.2247 0/0:16:16,0:16:627:0:0:0,-4.81648,-56.7589 0/0:26:26,0:26:1032:0:0:0,-7.82678,-93.1736 0/0:27:27,0:27:1076:0:0:0,-8.12781,-97.1261 dDocent_Contig_8164 42 . T C 163.22 . AB=0.135135;ABP=131.362;AC=3;AF=0.25;AN=12;AO=17;CIGAR=1X;DP=211;DPB=211;DPRA=1.09848;EPP=39.9253;EPPR=424.276;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.823529;PAIREDR=0.386598;PAO=0;PQA=0;PQR=0;PRO=0;QA=678;QR=6851;RO=194;RPL=0;RPP=39.9253;RPPR=424.276;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=194;SRP=424.276;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:32,2:32:1097:2:80:0,-2.64323,-91.4344 0/1:41:35,6:35:1242:6:236:-9.26954,0,-99.7315 0/1:48:42,6:42:1528:6:241:-7.61686,0,-123.349 0/1:22:19,3:19:659:3:121:-4.65733,0,-53.0002 0/0:26:26,0:26:937:0:0:0,-7.82678,-84.6421 0/0:40:40,0:40:1388:0:0:0,-12.0412,-125.197 dDocent_Contig_8165 46 . C A 136.205 . AB=0.127273;ABP=135.746;AC=3;AF=0.25;AN=12;AO=19;CIGAR=1X2M1I4M1X;DP=292;DPB=295.125;DPRA=0.903846;EPP=8.61041;EPPR=561.112;GTI=0;LEN=1;MEANALT=2.25;MQM=59.9474;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=746;QR=10172;RO=261;RPL=19;RPP=44.2683;RPPR=561.112;RPR=0;RUN=1;SAF=13;SAP=8.61041;SAR=6;SRF=261;SRP=569.765;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:61:58,0,1:58:2256:0,1:0,38:0,-17.4597,-203.049,-14.2433,-199.932,-199.631 0|0:78:69,5,2:69:2694:5,2:200,80:0,-4.25929,-224.264,-14.1723,-219.179,-235.052 0|0:43:40,0,3:40:1561:0,3:0,119:0,-12.0412,-140.345,-1.84928,-130.549,-129.646 0|1:59:49,8,0:49:1907:8,0:310,0:-10.9529,0,-154.594,-25.7033,-157.002,-182.469 0|1:17:14,3,0:14:543:3,0:118,0:-5.88521,0,-44.095,-10.0996,-44.998,-54.7057 0|1:34:31,3,0:31:1211:3,0:118,0:-0.767042,0,-99.0387,-10.099,-99.9418,-109.648 dDocent_Contig_8166 17 . G A 623.646 . AB=0.16242;ABP=313.821;AC=6;AF=0.5;AN=12;AO=51;CIGAR=1X;DP=314;DPB=314;DPRA=0;EPP=21.7871;EPPR=160.848;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.0196078;PAIREDR=0.377863;PAO=0;PQA=0;PQR=0;PRO=0;QA=1846;QR=10043;RO=262;RPL=0;RPP=113.755;RPPR=571.936;RPR=51;RUN=1;SAF=36;SAP=21.7871;SAR=15;SRF=200;SRP=160.848;SRR=62;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:69:59,10:59:2282:10:355:-11.5101,0,-184.791 0/1:69:61,8:61:2338:8:256:-2.57798,0,-189.837 0/1:35:30,5:30:1164:5:192:-7.11251,0,-94.5057 0/1:53:47,6:47:1793:6:225:-4.65447,0,-145.652 0/1:43:33,10:33:1247:10:366:-20.3384,0,-99.5655 0/1:45:32,12:32:1219:12:452:-27.3741,0,-96.3498 dDocent_Contig_8167 7 . G T 4957.52 . AB=0.571429;ABP=16.9698;AC=6;AF=0.5;AN=12;AO=180;CIGAR=1X;DP=315;DPB=315;DPRA=0;EPP=393.875;EPPR=293.988;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.944444;PAIREDR=0.947761;PAO=0;PQA=0;PQR=0;PRO=0;QA=6665;QR=4092;RO=134;RPL=0;RPP=393.875;RPPR=293.988;RPR=180;RUN=1;SAF=180;SAP=393.875;SAR=0;SRF=134;SRP=293.988;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:15,18:15:476:18:672:-50.8739,0,-33.2017 0/1:78:29,49:29:852:49:1800:-138.762,0,-53.4581 0/1:43:25,18:25:794:18:671:-47.7752,0,-58.7969 0/1:65:31,34:31:888:34:1246:-92.8549,0,-60.6054 0/1:35:6,29:6:191:29:1117:-90.2957,0,-6.96374 0/1:61:28,32:28:891:32:1159:-86.4125,0,-62.2879 dDocent_Contig_8168 15 . G T 343.979 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=2;CIGAR=1X2M1X2M1X;DP=294;DPB=294;DPRA=0.586957;EPP=7.35324;EPPR=158.207;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.658824;PAO=0;PQA=0;PQR=0;PRO=0;QA=68;QR=9255;RO=255;RPL=0;RPP=7.35324;RPPR=556.736;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=195;SRP=158.207;SRR=60;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:53:44,0,8:44:1607:0,8:0,289:-10.3061,-23.5515,-154.849,0,-131.264,-128.855 0|0:65:54,0,9:54:1989:0,9:0,327:-10.6748,-26.9304,-189.616,0,-162.913,-160.203 0|0:37:34,0,2:34:1215:0,2:0,70:0,-10.235,-109.288,-4.53955,-103.593,-102.991 0|0:57:46,0,11:46:1661:0,11:0,394:-18.6388,-32.4862,-168.039,0,-135.912,-132.6 0|0:55:54,0,0:54:1964:0,0:0,0:0,-16.2556,-176.85,-16.2556,-176.85,-176.85 0|0:27:23,2,2:23:819:2,2:68,49:0,-1.36016,-67.6095,-3.16719,-64.4164,-69.329 dDocent_Contig_8169 1 . N G 148.04 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=153;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:118:-11.0029,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_8170 43 . G T 566.222 . AB=0.381818;ABP=9.68264;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1X;DP=660;DPB=660;DPRA=0.563981;EPP=52.9542;EPPR=1360.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990581;PAO=0;PQA=0;PQR=0;PRO=0;QA=923;QR=25079;RO=637;RPL=0;RPP=52.9542;RPPR=1334.61;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=634;SRP=1360.3;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:196:196,0:196:7725:0:0:0,-59.0019,-694.886 0/0:183:181,2:181:7080:2:82:0,-47.3088,-629.137 0/0:71:71,0:71:2810:0:0:0,-21.3731,-253.005 0/0:155:155,0:155:6119:0:0:0,-46.6596,-550.487 0/1:19:10,9:10:400:9:359:-26.951,0,-30.6392 0/1:36:24,12:24:945:12:482:-32.8931,0,-74.5104 dDocent_Contig_8171 43 . A G 41.5311 . AB=0.166667;ABP=20.3821;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=131;DPB=131;DPRA=0.79646;EPP=9.52472;EPPR=280.959;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.875;PAO=0;PQA=0;PQR=0;PRO=0;QA=119;QR=5001;RO=128;RPL=0;RPP=9.52472;RPPR=280.959;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=128;SRP=280.959;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:795:0:0:0,-6.0206,-71.8686 0/0:18:18,0:18:718:0:0:0,-5.41854,-64.9458 0/0:11:11,0:11:434:0:0:0,-3.31133,-39.4105 0/0:23:23,0:23:871:0:0:0,-6.92369,-78.6924 0/1:18:15,3:15:582:3:119:-5.67596,0,-47.2957 0/0:41:41,0:41:1601:0:0:0,-12.3422,-144.326 dDocent_Contig_8172 28 . C T 422.24 . AB=0.134483;ABP=339.544;AC=5;AF=0.416667;AN=12;AO=39;CIGAR=1X;DP=345;DPB=345;DPRA=1.05455;EPP=87.6977;EPPR=667.481;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.717949;PAIREDR=0.722222;PAO=0;PQA=0;PQR=0;PRO=0;QA=1518;QR=11602;RO=306;RPL=0;RPP=87.6977;RPPR=667.481;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=306;SRP=667.481;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:38,4:38:1451:4:158:-1.95722,0,-118.218 0/0:55:55,0:55:2058:0:0:0,-16.5566,-185.434 0/1:38:33,5:33:1256:5:197:-6.66726,0,-101.888 0/1:97:88,9:88:3330:9:341:-1.84301,0,-270.629 0/1:60:47,13:47:1809:13:503:-27.553,0,-144.986 0/1:53:45,8:45:1698:8:319:-13.1228,0,-137.111 dDocent_Contig_8173 120 . T G 226.407 . AB=0.180328;ABP=57.1547;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=3M1X;DP=115;DPB=119.5;DPRA=2.90476;EPP=26.8965;EPPR=209.3;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=372;QR=3185;RO=95;RPL=0;RPP=26.8965;RPPR=209.3;RPR=11;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=209.3;SRR=95;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:13:10,3,0:10:342:3,0:104,0:-5.7897,0,-27.198,-8.8,-28.1011,-36.5556 0|0:26:20,4,2:20:679:4,2:136,69:-5.00789,0,-53.8599,-5.4211,-49.4578,-59.8877 0|0:1:1,0,0:1:35:0,0:0,0:0,-0.30103,-3.49863,-0.30103,-3.49863,-3.49863 0|0:20:18,2,0:18:603:2,0:70,0:-0.626796,0,-48.5666,-6.04534,-49.1687,-54.8657 0|1:35:26,0,9:26:855:0,9:0,303:-17.061,-24.8878,-93.98,0,-69.4268,-66.7175 0|0:20:20,0,0:20:671:0,0:0,0:0,-6.0206,-60.7061,-6.0206,-60.7061,-60.7061 dDocent_Contig_8174 63 . T A 44.3922 . AB=0.137931;ABP=36.0317;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=158;DPB=158;DPRA=1.12403;EPP=11.6962;EPPR=337.417;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.922078;PAO=0;PQA=0;PQR=0;PRO=0;QA=159;QR=5775;RO=154;RPL=4;RPP=11.6962;RPPR=337.417;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=154;SRP=337.417;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:957:0:0:0,-7.82678,-86.4388 0/0:32:32,0:32:1183:0:0:0,-9.63296,-106.763 0/0:28:28,0:28:1099:0:0:0,-8.42884,-99.1944 0/0:24:24,0:24:889:0:0:0,-7.22472,-80.3132 0/0:19:19,0:19:717:0:0:0,-5.71957,-64.8563 0/1:29:25,4:25:930:4:159:-5.96208,0,-75.2657 dDocent_Contig_8175 22 . C T 190.93 . AB=0.181818;ABP=61.0478;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=455;DPB=455;DPRA=1.18182;EPP=33.4109;EPPR=960.63;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=523;QR=17497;RO=441;RPL=0;RPP=33.4109;RPPR=960.63;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=441;SRP=960.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:38,0:38:1487:0:0:0,-11.4391,-134.083 0/0:103:101,2:101:3968:2:77:0,-23.6969,-349.816 0/0:68:68,0:68:2718:0:0:0,-20.47,-244.733 0/1:66:54,12:54:2142:12:446:-20.6159,0,-173.093 0/0:81:81,0:81:3227:0:0:0,-24.3834,-290.494 0/0:99:99,0:99:3955:0:0:0,-29.802,-355.938 dDocent_Contig_8176 30 . C A 1507.93 . AB=0.36478;ABP=28.2622;AC=6;AF=0.5;AN=12;AO=58;CIGAR=1X;DP=159;DPB=159;DPRA=0;EPP=128.956;EPPR=222.329;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.87931;PAIREDR=0.950495;PAO=0;PQA=0;PQR=0;PRO=0;QA=2308;QR=4070;RO=101;RPL=0;RPP=128.956;RPPR=222.329;RPR=58;RUN=1;SAF=58;SAP=128.956;SAR=0;SRF=101;SRP=222.329;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:11,13:11:441:13:506:-38.656,0,-32.8214 0/1:33:21,12:21:846:12:481:-33.7074,0,-66.5182 0/1:26:19,7:19:767:7:275:-17.2893,0,-61.5233 0/1:29:15,14:15:601:14:557:-41.7422,0,-45.7002 0/1:20:12,8:12:487:8:326:-23.6893,0,-38.1609 0/1:27:23,4:23:928:4:163:-6.93062,0,-75.6966 dDocent_Contig_8177 125 . G A 139.477 . AB=0.209302;ABP=34.5724;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=230;DPB=230;DPRA=1.14973;EPP=22.5536;EPPR=480.734;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.972727;PAO=0;PQA=0;PQR=0;PRO=0;QA=312;QR=7312;RO=220;RPL=0;RPP=22.5536;RPPR=480.734;RPR=9;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=480.734;SRR=220;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:46:46,0:46:1566:0:0:0,-13.8474,-141.23 0/1:43:34,9:34:1124:9:312:-15.4702,0,-88.5096 0/0:77:77,0:77:2540:0:0:0,-23.1793,-228.851 0/0:50:49,0:49:1602:0:0:0,-14.7505,-144.383 0/0:1:1,0:1:35:0:0:0,-0.30103,-3.49863 0/0:13:13,0:13:445:0:0:0,-3.91339,-40.3781 dDocent_Contig_8178 53 . A G 56.8025 . AB=0.138889;ABP=43.7857;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=298;DPB=298;DPRA=0.696833;EPP=18.2106;EPPR=634.909;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.571429;PAIREDR=0.742268;PAO=0;PQA=0;PQR=0;PRO=0;QA=271;QR=10937;RO=291;RPL=7;RPP=18.2106;RPPR=151.364;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=216;SRP=151.364;SRR=75;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:31,5:31:1197:5:193:-6.9021,0,-97.1698 0/0:50:50,0:50:1887:0:0:0,-15.0515,-170.062 0/0:30:30,0:30:1194:0:0:0,-9.0309,-107.738 0/0:41:39,2:39:1414:2:78:0,-4.93893,-120.123 0/0:59:59,0:59:2115:0:0:0,-17.7608,-190.569 0/0:82:82,0:82:3130:0:0:0,-24.6845,-281.815 dDocent_Contig_8179 15 . G A 6897.97 . AB=0.0448029;ABP=2011.54;AC=6;AF=0.5;AN=12;AO=50;CIGAR=1X3M;DP=1116;DPB=1116;DPRA=0;EPP=111.584;EPPR=1612.36;GTI=0;LEN=1;MEANALT=3.33333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=1.11022e-16;PAIRED=0.98;PAIREDR=0.980289;PAO=0;PQA=0;PQR=0;PRO=0;QA=1982;QR=29903;RO=761;RPL=0;RPP=111.584;RPPR=1655.5;RPR=50;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=756;SRP=1612.36;SRR=5;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:171:137,24,0,9:137:5375:24,0,9:950,0,367:-36.9379,0,-434.785,-78.179,-442.01,-520.197,-47.8972,-411.73,-489.917,-487.208 0|1:217:171,30,0,14:171:6683:30,0,14:1190,0,559:-46.4909,0,-540.379,-97.9671,-549.41,-647.367,-51.9238,-503.369,-601.327,-597.113 0|1:139:114,14,0,11:114:4505:14,0,11:552,0,416:-11.1054,0,-366.51,-45.4228,-370.724,-416.138,-11.34,-336.636,-382.049,-378.738 0|1:197:145,39,10,2:145:5700:39,10,2:1516,401,81:-80.9164,0,-457.084,-91.5241,-435.785,-557.343,-117.886,-462.145,-553.674,-586.111 0|1:196:95,85,2,13:95:3724:85,2,13:3345,82,519:-246.548,0,-280.62,-268.378,-299.439,-573.99,-232.401,-263.462,-531.847,-534.702 0|1:196:99,95,0,1:99:3916:95,0,1:3753,0,40:-279.02,0,-293.669,-308.822,-322.267,-631.093,-305.526,-318.972,-627.798,-627.497 dDocent_Contig_8180 45 . A G 331.082 . AB=0.521739;ABP=3.10471;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=376;DPB=376;DPRA=0.325779;EPP=29.068;EPPR=793.426;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=458;QR=14461;RO=364;RPL=0;RPP=29.068;RPPR=793.426;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=364;SRP=793.426;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:79:79,0:79:3126:0:0:0,-23.7814,-281.429 0/0:177:177,0:177:7046:0:0:0,-53.2823,-633.81 0/0:62:62,0:62:2487:0:0:0,-18.6639,-223.965 0/0:32:32,0:32:1245:0:0:0,-9.63296,-112.315 0/1:23:11,12:11:444:12:458:-34.631,0,-33.3908 0/0:3:3,0:3:113:0:0:0,-0.90309,-10.5369 dDocent_Contig_8182 13 . T C 379.472 . AB=0.253521;ABP=40.4758;AC=2;AF=0.166667;AN=12;AO=18;CIGAR=1X;DP=193;DPB=193;DPRA=1.16393;EPP=42.0968;EPPR=383.018;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.777778;PAIREDR=0.68;PAO=0;PQA=0;PQR=0;PRO=0;QA=687;QR=6462;RO=175;RPL=0;RPP=42.0968;RPPR=383.018;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=175;SRP=383.018;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:922:0:0:0,-7.52575,-83.2939 0/0:38:38,0:38:1413:0:0:0,-11.4391,-127.453 0/0:33:33,0:33:1233:0:0:0,-9.93399,-111.262 0/0:26:26,0:26:951:0:0:0,-7.82678,-85.9008 0/1:35:23,12:23:844:12:457:-30.9405,0,-65.7395 0/1:36:30,6:30:1099:6:230:-10.2285,0,-88.3773 dDocent_Contig_8183 46 . A C 442.857 . AB=0.229885;ABP=58.1457;AC=2;AF=0.166667;AN=12;AO=21;CIGAR=1X;DP=226;DPB=226;DPRA=0.948276;EPP=48.6112;EPPR=445.991;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=853;QR=8114;RO=204;RPL=0;RPP=48.6112;RPPR=445.991;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=204;SRP=445.991;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:946:0:0:0,-7.22472,-85.4426 0/0:54:54,0:54:2165:0:0:0,-16.2556,-195.026 0/1:30:25,4:25:991:4:160:-5.65348,0,-80.3554 0/0:23:22,1:22:854:1:41:0,-2.82912,-73.0701 0/0:38:38,0:38:1528:0:0:0,-11.4391,-137.76 0/1:57:41,16:41:1630:16:652:-41.854,0,-129.771 dDocent_Contig_8184 64 . C T 57.8522 . AB=0.173913;ABP=24.253;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=192;DPB=192;DPRA=0.680473;EPP=11.6962;EPPR=411.247;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.957447;PAO=0;PQA=0;PQR=0;PRO=0;QA=154;QR=7377;RO=188;RPL=4;RPP=11.6962;RPPR=411.247;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=188;SRP=411.247;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:680:0:0:0,-5.11751,-61.5293 0/1:23:19,4:19:748:4:154:-7.3081,0,-60.7207 0/0:17:17,0:17:636:0:0:0,-5.11751,-57.555 0/0:13:13,0:13:523:0:0:0,-3.91339,-47.4159 0/0:67:67,0:67:2612:0:0:0,-20.169,-235.22 0/0:55:55,0:55:2178:0:0:0,-16.5566,-196.184 dDocent_Contig_8185 199 . G A 2064.95 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=5;CIGAR=1X2M1X2M1X;DP=323;DPB=323;DPRA=0;EPP=6.91895;EPPR=478.563;GTI=0;LEN=1;MEANALT=2.5;MQM=45.6;MQMR=60;NS=6;NUMALT=3;ODDS=2.77556e-17;PAIRED=0;PAIREDR=0.863014;PAO=0;PQA=0;PQR=0;PRO=0;QA=176;QR=7939;RO=219;RPL=5;RPP=13.8677;RPPR=478.563;RPR=0;RUN=1;SAF=1;SAP=6.91895;SAR=4;SRF=0;SRP=478.563;SRR=219;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:60:36,0,0,24:36:1306:0,0,24:0,0,874:-60.9196,-71.7567,-178.395,-71.7567,-178.395,-178.395,0,-107.001,-107.001,-99.7767 0|0:26:15,0,2,9:15:543:0,2,9:0,70,320:-21.5657,-26.0812,-70.4135,-20.3867,-64.7188,-64.1167,0,-44.3386,-38.6445,-41.6293 0|0:66:35,0,0,28:35:1274:0,0,28:0,0,1012:-72.0869,-82.623,-186.687,-82.623,-186.687,-186.687,0,-104.084,-104.084,-95.655 0|0:67:41,0,0,24:41:1492:0,0,24:0,0,875:-59.1441,-71.4863,-193.35,-71.4863,-193.35,-193.35,0,-121.868,-121.868,-114.643 0|0:42:37,3,0,1:37:1351:3,0,1:105,0,37:0,-2.7911,-112.259,-11.1381,-113.162,-121.529,-8.10813,-110.135,-118.502,-118.201 0|0:62:55,2,0,5:55:1973:2,0,5:71,0,173:0,-11.0491,-171.378,-16.5566,-171.98,-177.489,-2.49369,-157.923,-163.432,-161.926 dDocent_Contig_8186 162 . G A 112.806 . AB=0.0869565;ABP=71.1757;AC=0;AF=0;AN=12;AO=4;CIGAR=2X;DP=163;DPB=163;DPRA=1.96581;EPP=11.6962;EPPR=330.903;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.629139;PAO=0;PQA=0;PQR=0;PRO=0;QA=157;QR=6016;RO=151;RPL=4;RPP=11.6962;RPPR=330.903;RPR=0;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=330.903;SRR=151;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:23:23,0,0:23:915:0,0:0,0:0,-6.92369,-82.6539,-6.92369,-82.6539,-82.6539 0|0:31:31,0,0:31:1242:0,0:0,0:0,-9.33193,-112.051,-9.33193,-112.051,-112.051 0|0:46:35,4,7:35:1380:4,7:157,283:-12.8034,-10.4313,-122.749,0,-100.619,-111.424 0|0:28:27,0,0:27:1091:0,0:0,0:0,-8.12781,-98.1248,-8.12781,-98.1248,-98.1248 0|0:4:4,0,0:4:155:0,0:0,0:0,-1.20412,-14.3227,-1.20412,-14.3227,-14.3227 0|0:31:31,0,0:31:1233:0,0:0,0:0,-9.33193,-111.236,-9.33193,-111.236,-111.236 dDocent_Contig_8188 9 . A G 710.98 . AB=0.281046;ABP=66.721;AC=6;AF=0.5;AN=12;AO=43;CIGAR=1X;DP=153;DPB=153;DPRA=0;EPP=79.8198;EPPR=241.872;GTI=0;LEN=1;MEANALT=1;MQM=58.0233;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.953488;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1420;QR=3822;RO=110;RPL=0;RPP=96.3836;RPPR=241.872;RPR=43;RUN=1;SAF=41;SAP=79.8198;SAR=2;SRF=110;SRP=241.872;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:29:25,4:25:877:4:139:-4.1193,0,-70.5046 0/1:34:27,7:27:971:7:200:-8.04206,0,-77.4569 0/1:19:15,4:15:489:4:118:-5.19138,0,-38.5898 0/1:37:22,15:22:791:15:506:-34.6863,0,-60.3681 0/1:20:11,9:11:390:9:316:-22.7495,0,-29.4115 0/1:14:10,4:10:304:4:141:-7.53069,0,-23.4337 dDocent_Contig_8189 54 . C T 923.255 . AB=0.276596;ABP=64.1349;AC=3;AF=0.25;AN=12;AO=42;CIGAR=1X;DP=262;DPB=262;DPRA=1.29714;EPP=94.2121;EPPR=480.734;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.990909;PAO=0;PQA=0;PQR=0;PRO=0;QA=1656;QR=8718;RO=220;RPL=42;RPP=94.2121;RPPR=480.734;RPR=0;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=220;SRP=480.734;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1380:0:0:0,-10.536,-124.456 0/1:53:35,18:35:1359:18:709:-48.183,0,-106.6 0/1:43:31,12:31:1253:12:490:-31.5068,0,-100.094 0/1:45:36,9:36:1443:9:345:-17.8575,0,-116.577 0/0:35:33,2:33:1284:2:71:0,-3.79567,-109.081 0/0:51:50,1:50:1999:1:41:0,-11.258,-176.009 dDocent_Contig_8190 24 . C G 601.489 . AB=0.174312;ABP=203.862;AC=4;AF=0.333333;AN=12;AO=44;CIGAR=1X;DP=304;DPB=304;DPRA=6.55556;EPP=90.0666;EPPR=567.593;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.772727;PAIREDR=0.930769;PAO=0;PQA=0;PQR=0;PRO=0;QA=1697;QR=10127;RO=260;RPL=0;RPP=98.5551;RPPR=567.593;RPR=44;RUN=1;SAF=43;SAP=90.0666;SAR=1;SRF=260;SRP=567.593;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:68:60,8:60:2396:8:324:-9.05915,0,-195.329 0/0:77:71,6:71:2743:6:235:0,-1.65946,-225.472 0/1:21:18,3:18:651:3:121:-4.95857,0,-52.5759 0/1:78:67,11:67:2599:11:415:-14.2024,0,-210.579 0/0:9:9,0:9:347:0:0:0,-2.70927,-31.5834 0/1:51:35,16:35:1391:16:602:-39.1505,0,-110.094 dDocent_Contig_8191 12 . T A 2486.94 . AB=0.320635;ABP=91.0342;AC=5;AF=0.416667;AN=12;AO=102;CIGAR=1M3D2M2X;DP=355;DPB=316.75;DPRA=0;EPP=224.5;EPPR=524.164;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.958333;PAO=0;PQA=0;PQR=0;PRO=0;QA=3918;QR=8759;RO=240;RPL=0;RPP=224.5;RPPR=524.164;RPR=102;RUN=1;SAF=102;SAP=224.5;SAR=0;SRF=240;SRP=524.164;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:49:43,5:43:1567:5:192:-2.97842,0,-126.659 0|1:41:36,4:36:1321:4:156:-2.15416,0,-106.952 0|1:50:40,8:40:1433:8:301:-12.8326,0,-114.675 0|0:40:36,1:36:1324:1:38:0,-7.67313,-115.78 0|1:77:38,38:38:1347:38:1463:-108.669,0,-98.2379 0|1:98:47,46:47:1767:46:1768:-131.227,0,-131.145 dDocent_Contig_8192 55 . C T 40.3046 . AB=0.148148;ABP=32.0437;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=279;DPB=279;DPRA=0.535714;EPP=11.6962;EPPR=600.165;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.661818;PAO=0;PQA=0;PQR=0;PRO=0;QA=148;QR=9639;RO=275;RPL=2;RPP=3.0103;RPPR=12.6832;RPR=2;RUN=1;SAF=2;SAP=3.0103;SAR=2;SRF=120;SRP=12.6832;SRR=155;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1435:0:0:0,-12.3422,-129.442 0/0:56:56,0:56:1943:0:0:0,-16.8577,-175.138 0/1:27:23,4:23:789:4:148:-5.5533,0,-63.1871 0/0:44:44,0:44:1554:0:0:0,-13.2453,-140.13 0/0:49:49,0:49:1729:0:0:0,-14.7505,-155.871 0/0:62:62,0:62:2189:0:0:0,-18.6639,-197.245 dDocent_Contig_8193 7 . G T 276.602 . AB=0.191667;ABP=102.102;AC=2;AF=0.2;AN=10;AO=27;CIGAR=1X;DP=294;DPB=294;DPRA=14.45;EPP=61.6401;EPPR=578.45;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=783;QR=8564;RO=265;RPL=0;RPP=61.6401;RPPR=578.45;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=265;SRP=578.45;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:83:81,1:81:2601:1:11:0,-23.8343,-233.042 0/1:81:64,17:64:2018:17:566:-26.852,0,-157.456 0/1:39:33,6:33:1037:6:173:-4.10852,0,-81.8623 0/0:86:82,3:82:2735:3:33:0,-22.6176,-243.267 ./.:.:.:.:.:.:.:. 0/0:5:5,0:5:173:0:0:0,-1.50515,-15.9076 dDocent_Contig_8194 87 . G A 40.37 . AB=0.166667;ABP=26.1727;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=179;DPB=179;DPRA=0.904255;EPP=8.80089;EPPR=378.675;GTI=0;LEN=1;MEANALT=1;MQM=48.8333;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.653179;PAO=0;PQA=0;PQR=0;PRO=0;QA=205;QR=5841;RO=173;RPL=4;RPP=4.45795;RPPR=13.5664;RPR=2;RUN=1;SAF=3;SAP=3.0103;SAR=3;SRF=101;SRP=13.5664;SRR=72;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:20,4:20:694:4:135:-5.25881,0,-55.5588 0/0:42:42,0:42:1383:0:0:0,-12.6433,-124.761 0/0:28:28,0:28:946:0:0:0,-8.42884,-85.4484 0/0:40:39,1:39:1312:1:30:0,-10.174,-116.508 0/0:21:20,1:20:683:1:40:0,-3.01892,-58.4867 0/0:24:24,0:24:823:0:0:0,-7.22472,-74.3866 dDocent_Contig_8196 29 . A C 340.197 . AB=0.189474;ABP=82.5776;AC=1;AF=0.0833333;AN=12;AO=23;CIGAR=1X;DP=321;DPB=321;DPRA=1.09804;EPP=52.9542;EPPR=650.109;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.869565;PAIREDR=0.97651;PAO=0;PQA=0;PQR=0;PRO=0;QA=902;QR=11432;RO=298;RPL=0;RPP=52.9542;RPPR=650.109;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=298;SRP=650.109;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:36,0:36:1375:0:0:0,-10.8371,-124.017 0/0:79:79,0:79:3074:0:0:0,-23.7814,-276.794 0/0:38:38,0:38:1477:0:0:0,-11.4391,-133.193 0/1:95:77,18:77:2885:18:709:-35.5426,0,-231.204 0/0:22:21,1:21:803:1:41:0,-2.52809,-68.4947 0/0:51:47,4:47:1818:4:152:0,-1.30389,-149.807 dDocent_Contig_8197 7 . G T 1844.41 . AB=0.0454545;ABP=200.417;AC=0;AF=0;AN=12;AO=5;CIGAR=2X;DP=327;DPB=327;DPRA=0;EPP=13.8677;EPPR=480.734;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=115;QR=7186;RO=220;RPL=0;RPP=13.8677;RPPR=480.734;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=220;SRP=480.734;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:23:6,0,17:6:211:0,17:0,497:-38.0813,-39.8875,-57.0753,0,-17.5238,-12.4063 0|0:50:29,1,20:29:963:1,20:26,679:-46.4042,-53.0991,-130.689,0,-75.9283,-71.9442 0|0:41:24,0,17:24:809:0,17:0,518:-34.5625,-41.7872,-107.351,0,-65.8819,-60.7644 0|0:84:71,0,13:71:2333:0,13:0,422:-12.9964,-34.3695,-222.863,0,-188.819,-184.906 0|0:60:46,4,10:46:1499:4,10:89,342:-13.9899,-21.0661,-140.848,0,-114.297,-118.084 0|0:69:44,0,24:44:1371:0,24:0,777:-49.6285,-62.8739,-172.961,0,-110.287,-103.062 dDocent_Contig_8198 49 . T C 260.691 . AB=0.210526;ABP=16.8392;AC=0;AF=0;AN=12;AO=4;CIGAR=8M5X11M;DP=139;DPB=128.5;DPRA=0.721519;EPP=11.6962;EPPR=244.044;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=134;QR=3863;RO=111;RPL=4;RPP=11.6962;RPPR=244.044;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=111;SRP=244.044;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:19:18,0,0,0,0:18:618:0,0,0,0:0,0,0,0:0,-5.41854,-55.5941,-5.41854,-55.5941,-55.5941,-5.41854,-55.5941,-55.5941,-55.5941,-5.41854,-55.5941,-55.5941,-55.5941,-55.5941 0|0:19:5,0,0,10,4:5:164:0,0,10,4:0,0,332,134:-25.3513,-26.8565,-40.1055,-26.8565,-40.1055,-40.1055,0,-13.2464,-13.2464,-10.2361,-16.0036,-29.2525,-29.2525,-2.39123,-28.0484 0|0:26:19,3,0,3,0:19:670:3,0,3,0:117,0,106,0:-3.90912,0,-53.6438,-9.62869,-54.5469,-64.1679,-1.01149,-45.9142,-55.5358,-54.6327,-9.62869,-54.5469,-64.1679,-55.5358,-64.1679 0|0:15:12,1,2,0,0:12:418:1,2,0,0:38,64,0,0:-1.50434,-1.98025,-35.6959,0,-30.8444,-33.3613,-5.1167,-35.997,-33.9634,-39.1158,-5.1167,-35.997,-33.9634,-39.1158,-39.1158 0|0:33:32,0,0,0,0:32:1110:0,0,0,0:0,0,0,0:0,-9.63296,-99.8465,-9.63296,-99.8465,-99.8465,-9.63296,-99.8465,-99.8465,-99.8465,-9.63296,-99.8465,-99.8465,-99.8465,-99.8465 0|0:27:25,0,0,0,0:25:883:0,0,0,0:0,0,0,0:0,-7.52575,-79.5594,-7.52575,-79.5594,-79.5594,-7.52575,-79.5594,-79.5594,-79.5594,-7.52575,-79.5594,-79.5594,-79.5594,-79.5594 dDocent_Contig_8199 107 . N T 661.925 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=21;CIGAR=1X;DP=21;DPB=21;DPRA=0;EPP=48.6112;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=719;QR=0;RO=0;RPL=0;RPP=48.6112;RPPR=0;RPR=21;RUN=1;SAF=0;SAP=48.6112;SAR=21;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:18:0,18:0:0:18:616:-55.7627,-5.41854,0 dDocent_Contig_8200 38 . C T 2505.7 . AB=0.159607;ABP=1333.49;AC=5;AF=0.416667;AN=12;AO=216;CIGAR=1X;DP=1458;DPB=1458;DPRA=0;EPP=472.048;EPPR=2695.64;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.99537;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7455;QR=42824;RO=1240;RPL=0;RPP=472.048;RPPR=2695.64;RPR=216;RUN=1;SAF=216;SAP=472.048;SAR=0;SRF=1240;SRP=2695.64;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:95:80,15:80:2722:15:520:-18.5315,0,-216.632 0/1:122:92,30:92:3179:30:1035:-56.7345,0,-249.617 0/0:136:131,5:131:4521:5:162:0,-26.0408,-392.174 0/1:404:357,46:357:12396:46:1585:-21.268,0,-993.839 0/1:240:198,42:198:6836:42:1441:-57.7382,0,-543.095 0/1:461:382,78:382:13170:78:2712:-105.52,0,-1046.37 dDocent_Contig_8201 1 . N A 203.007 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=6;CIGAR=1X1M8I3M;DP=13;DPB=29.6;DPRA=2.57143;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=215;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:1:0,0:0:0:0:0:0,0,0 .:.:.:.:.:.:.:. 1|1:5:0,0:0:0:0:0:0,0,0 1|1:1:0,0:0:0:0:0:0,0,0 .:.:.:.:.:.:.:. 1|1:6:0,6:0:0:6:215:-19.697,-1.80618,0 dDocent_Contig_8202 19 . A T 505.13 . AB=0.30303;ABP=25.2514;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=181;DPB=181;DPRA=1.14783;EPP=46.4397;EPPR=350.446;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.5;PAIREDR=0.66875;PAO=0;PQA=0;PQR=0;PRO=0;QA=810;QR=6357;RO=160;RPL=0;RPP=46.4397;RPPR=350.446;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=160;SRP=350.446;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:842:0:0:0,-6.32163,-76.0941 0/0:39:39,0:39:1564:0:0:0,-11.7402,-140.998 0/0:14:14,0:14:564:0:0:0,-4.21442,-51.1023 0/0:41:41,0:41:1609:0:0:0,-12.3422,-145.051 0/1:42:29,12:29:1158:12:488:-31.6117,0,-91.8447 0/1:24:16,8:16:620:8:322:-22.1231,0,-48.9029 dDocent_Contig_8203 27 . G A 118.706 . AB=0.222222;ABP=21.1059;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=112;DPB=112;DPRA=1.58824;EPP=16.0391;EPPR=233.186;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.613208;PAO=0;PQA=0;PQR=0;PRO=0;QA=235;QR=4258;RO=106;RPL=0;RPP=16.0391;RPPR=233.186;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=106;SRP=233.186;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:407:0:0:0,-3.0103,-36.9906 0/0:14:14,0:14:560:0:0:0,-4.21442,-50.7433 0/0:22:22,0:22:888:0:0:0,-6.62266,-80.2273 0/0:28:28,0:28:1115:0:0:0,-8.42884,-100.634 0/0:11:11,0:11:441:0:0:0,-3.31133,-40.0441 0/1:27:21,6:21:847:6:235:-13.3934,0,-68.4123 dDocent_Contig_8204 122 . T G 50.8382 . AB=0.162162;ABP=39.6906;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=1X;DP=99;DPB=99;DPRA=1.30233;EPP=18.2106;EPPR=202.786;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=243;QR=3070;RO=92;RPL=0;RPP=18.2106;RPPR=202.786;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=202.786;SRR=92;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:18,1:18:592:1:35:0,-2.22094,-50.0927 0/1:12:9,3:9:299:3:103:-5.99761,0,-23.6212 0/0:33:33,0:33:1101:0:0:0,-9.93399,-99.3888 0/1:25:22,3:22:753:3:105:-2.27041,0,-60.5624 0/0:9:9,0:9:297:0:0:0,-2.70927,-27.052 0/0:1:1,0:1:28:0:0:0,-0.30103,-2.79973 dDocent_Contig_8205 43 . A T 1792.72 . AB=0.354497;ABP=37.7653;AC=2;AF=0.2;AN=10;AO=71;CIGAR=1X;DP=298;DPB=298;DPRA=5.48077;EPP=140.302;EPPR=495.935;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0.507042;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2808;QR=9009;RO=227;RPL=2;RPP=140.302;RPPR=495.935;RPR=69;RUN=1;SAF=71;SAP=157.185;SAR=0;SRF=227;SRP=495.935;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:13:13,0:13:526:0:0:0,-3.91339,-47.6874 0/0:68:65,3:65:2597:3:113:0,-9.93402,-223.328 0/0:28:27,1:27:1071:1:40:0,-4.43316,-92.6809 0/1:60:28,32:28:1082:32:1255:-95.1553,0,-79.6052 ./.:.:.:.:.:.:.:. 0/1:129:94,35:94:3733:35:1400:-87.4179,0,-297.162 dDocent_Contig_8206 7 . G T 1762.11 . AB=0.352381;ABP=42.7586;AC=3;AF=0.25;AN=12;AO=83;CIGAR=1X;DP=386;DPB=386;DPRA=0;EPP=183.243;EPPR=656.623;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993355;PAO=0;PQA=0;PQR=0;PRO=0;QA=2813;QR=9524;RO=301;RPL=0;RPP=183.243;RPPR=656.623;RPR=83;RUN=1;SAF=83;SAP=183.243;SAR=0;SRF=301;SRP=656.623;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:63:59,4:59:1873:4:44:0,-14.8949,-164.733 0/1:74:66,8:66:2038:8:312:-6.1687,0,-161.359 0/0:34:33,1:33:1093:1:11:0,-9.13502,-97.5507 0/0:79:74,4:74:2492:4:52:0,-18.7844,-219.685 0/1:57:30,26:30:855:26:924:-66.478,0,-60.232 0/1:79:39,40:39:1173:40:1470:-108.786,0,-82.0534 dDocent_Contig_8207 22 . T A 3329.51 . AB=0.0896445;ABP=949.333;AC=4;AF=0.333333;AN=12;AO=58;CIGAR=13M1X4M;DP=647;DPB=663.611;DPRA=0;EPP=128.956;EPPR=467.705;GTI=0;LEN=1;MEANALT=15.1667;MQM=60;MQMR=60;NS=6;NUMALT=6;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2113;QR=7968;RO=214;RPL=0;RPP=128.956;RPPR=467.705;RPR=58;RUN=1;SAF=58;SAP=128.956;SAR=0;SRF=214;SRP=467.705;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:109:28,2,41,12,0,16,3:28:1028:2,41,12,0,16,3:73,1347,372,0,581,117:-100.414,-102.878,-186.321,0,-78.0894,-71.7125,-78.9914,-157.072,-54.2064,-159.424,-108.843,-186.923,-84.0547,-163.037,-192.888,-61.3999,-139.484,-36.6132,-115.598,-145.449,-140.633,-99.2232,-177.303,-74.4348,-153.417,-183.269,-135.83,-182.365 0|1:128:50,2,20,19,4,14,7:50:1863:2,20,19,4,14,7:73,654,617,122,516,237:-37.7688,-46.8543,-198.779,0,-146.569,-146.513,-3.02668,-149.595,-102.748,-149.84,-43.047,-189.609,-142.762,-145.787,-194.37,-10.6139,-157.184,-110.336,-113.362,-153.376,-158.934,-33.6093,-180.173,-133.326,-136.351,-176.366,-143.94,-184.031 0|1:92:24,3,27,5,8,6,7:24:902:3,27,5,8,6,7:102,885,163,247,218,256:-64.2758,-63.2256,-136.241,0,-65.6568,-65.8032,-58.3392,-123.985,-60.771,-130.753,-51.6861,-117.332,-54.1189,-112.446,-123.198,-53.6933,-119.34,-56.1252,-114.454,-107.801,-125.808,-50.5771,-116.224,-53.0092,-111.338,-104.686,-106.693,-122.391 0|1:155:37,1,40,12,5,16,21:37:1378:1,40,12,5,16,21:38,1283,377,168,601,790:-92.2466,-100.268,-212.779,0,-109.7,-100.776,-73.083,-182.779,-82.5175,-182.284,-89.7759,-199.472,-99.2093,-172.288,-201.083,-54.1416,-163.841,-63.5766,-136.656,-153.349,-162.141,-38.6461,-148.347,-48.082,-121.162,-137.855,-102.223,-145.142 0|0:70:36,3,10,11,0,4,1:36:1363:3,10,11,0,4,1:112,313,358,0,124,39:-18.0624,-19.7237,-130.602,-3.74702,-106.358,-112.519,0,-102.615,-86.6408,-108.475,-28.8995,-131.505,-115.529,-111.786,-140.677,-18.9507,-121.558,-105.583,-101.84,-130.73,-129.525,-25.6913,-128.299,-112.323,-108.58,-137.47,-127.523,-137.169 0|0:93:39,8,13,16,0,2,0:39:1434:8,13,16,0,2,0:279,451,533,0,73,0:-31.4043,-20.4475,-135.307,-6.47448,-101.054,-119.833,0,-94.5804,-80.6116,-112.456,-43.1445,-137.715,-123.746,-117.272,-160.406,-37.1784,-131.75,-117.781,-111.307,-154.442,-153.84,-43.1445,-137.715,-123.746,-117.272,-160.406,-154.442,-160.406 dDocent_Contig_8208 98 . N A 140.487 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=138;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_8209 70 . T C 3332.43 . AB=0.0555556;ABP=311.842;AC=0;AF=0;AN=12;AO=10;CIGAR=4M1X10M1I2M;DP=343;DPB=363.412;DPRA=0;EPP=24.725;EPPR=267.93;GTI=0;LEN=1;MEANALT=4.66667;MQM=60;MQMR=60;NS=6;NUMALT=6;ODDS=0;PAIRED=1;PAIREDR=0.97541;PAO=0;PQA=0;PQR=0;PRO=0;QA=333;QR=4525;RO=122;RPL=10;RPP=24.725;RPPR=267.93;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=122;SRP=267.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:51:29,0,11,0,0,0,9:29:1051:0,11,0,0,0,9:0,374,0,0,0,323:-21.6098,-30.3397,-116.159,0,-85.8257,-82.5144,-30.3397,-116.159,-85.8257,-116.159,-30.3397,-116.159,-85.8257,-116.159,-116.159,-30.3397,-116.159,-85.8257,-116.159,-116.159,-116.159,-3.97735,-89.8104,-59.4774,-89.8104,-89.8104,-89.8104,-87.1011 0|0:50:22,0,11,1,4,1,9:22:821:0,11,1,4,1,9:0,355,26,142,35,315:-22.0048,-28.6274,-95.8698,0,-67.2488,-63.9374,-26.5909,-93.8328,-65.2123,-93.5317,-17.0517,-84.2986,-55.678,-82.2617,-83.0945,-25.7787,-93.022,-64.401,-90.9849,-81.4508,-92.721,-2.98534,-70.2396,-41.62,-68.2029,-58.6681,-67.3917,-67.5303 0|0:61:28,0,6,1,7,0,19:28:1061:0,6,1,7,0,19:0,184,37,254,0,671:-46.2193,-54.6481,-141.655,-39.9102,-126.914,-125.108,-51.6204,-138.628,-123.887,-138.326,-33.9029,-120.914,-106.173,-117.886,-118.806,-54.6481,-141.655,-126.914,-138.628,-120.914,-141.655,0,-87.0184,-72.2813,-83.9913,-66.2779,-87.0184,-81.2988 0|0:69:32,0,11,8,0,0,18:32:1191:0,11,8,0,0,18:0,365,270,0,0,646:-43.0714,-52.7043,-150.201,-23.1849,-120.681,-117.37,-30.8265,-128.324,-98.8048,-125.916,-52.7043,-150.201,-120.681,-128.324,-150.201,-52.7043,-150.201,-120.681,-128.324,-150.201,-150.201,0,-97.5089,-67.9906,-75.6325,-97.5089,-97.5089,-92.0903 0|0:41:4,0,30,0,0,3,3:4:152:0,30,0,0,3,3:0,991,0,0,107,111:-78.909,-80.1131,-92.5835,0,-12.4773,-3.44641,-80.1131,-92.5835,-12.4773,-92.5835,-80.1131,-92.5835,-12.4773,-92.5835,-92.5835,-71.3885,-83.8595,-3.75597,-83.8595,-83.8595,-82.9564,-71.0289,-83.5,-3.39251,-83.5,-83.5,-74.7756,-82.5969 0|0:71:7,4,30,0,0,4,24:7:249:4,30,0,0,4,24:136,1028,0,0,132,876:-132.648,-123.724,-142.809,-51.3034,-60.5622,-62.5613,-134.755,-144.013,-71.5922,-155.044,-134.755,-144.013,-71.5922,-155.044,-155.044,-124.085,-133.343,-60.9234,-144.374,-144.374,-143.17,-63.1718,-72.4313,0,-83.4626,-83.4626,-72.7923,-76.2379 dDocent_Contig_8210 53 . C A 3963.98 . AB=0.131403;ABP=532.874;AC=7;AF=0.583333;AN=12;AO=60;CIGAR=1X3M;DP=450;DPB=450;DPRA=0;EPP=133.299;EPPR=528.507;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.954545;PAO=0;PQA=0;PQR=0;PRO=0;QA=2305;QR=9400;RO=242;RPL=60;RPP=133.299;RPPR=528.507;RPR=0;RUN=1;SAF=60;SAP=133.299;SAR=0;SRF=242;SRP=528.507;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:83:28,39,16:28:1078:39,16:1521,615:-116.596,0,-76.7619,-74.5399,-38.0162,-158.223 0|1:105:65,27,13:65:2510:27,13:1040,501:-65.8154,0,-198.008,-44.2438,-164.997,-246.466 0|1:74:37,33,4:37:1458:33,4:1289,158:-94.8236,0,-110.017,-92.9595,-106.949,-211.709 0|1:146:80,45,21:80:3106:45,21:1747,812:-119.456,0,-241.642,-76.8468,-188.497,-325.713 1|1:1:0,0,1:0:0:0,1:0,39:-3.89656,-3.89656,-3.89656,-0.30103,-0.30103,0 0|1:41:32,4,5:32:1248:4,5:157,180:-5.02997,-1.73596,-103.141,0,-89.6679,-101.076 dDocent_Contig_8211 8 . C A 5961.18 . AB=0.29902;ABP=217.731;AC=5;AF=0.416667;AN=12;AO=183;CIGAR=3X2M;DP=612;DPB=612.2;DPRA=0;EPP=400.39;EPPR=369.989;GTI=0;LEN=1;MEANALT=9;MQM=60;MQMR=58.4497;NS=6;NUMALT=7;ODDS=0;PAIRED=0.601093;PAIREDR=0.751479;PAO=0;PQA=0;PQR=0;PRO=0;QA=6992;QR=6023;RO=169;RPL=0;RPP=400.39;RPPR=369.989;RPR=183;RUN=1;SAF=183;SAP=400.39;SAR=0;SRF=169;SRP=369.989;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:94:28,2,0,2,1,7,35,12:28:1014:2,0,2,1,7,35,12:78,0,73,26,265,1326,435:-100.31,-103.038,-184.45,-108.739,-185.052,-190.753,-102.819,-179.131,-184.833,-184.23,-106.704,-183.016,-188.718,-182.797,-188.417,-87.9768,-164.289,-169.991,-164.07,-167.956,-167.884,0,-76.3227,-82.0246,-76.1034,-79.9896,-61.2605,-71.4886,-74.1049,-150.417,-156.118,-150.198,-154.083,-135.356,-47.3873,-152.506 0|1:193:66,7,0,5,2,7,62,27:66:2361:7,0,5,2,7,62,27:260,0,193,78,271,2386,994:-176.05,-176.434,-366.481,-195.918,-368.588,-388.073,-180.067,-352.737,-372.222,-370.716,-189.715,-362.385,-381.869,-366.018,-381.267,-174.689,-347.358,-366.843,-350.992,-360.64,-364.736,0,-172.675,-192.16,-176.308,-185.956,-170.93,-173.496,-115.151,-287.82,-307.304,-291.453,-301.101,-286.075,-111.389,-299.176 0|1:101:24,5,0,11,0,13,32,12:24:807:5,0,11,0,13,32,12:191,0,421,0,509,1220,452:-92.8646,-86.6579,-150.506,-100.089,-152.011,-165.444,-65.5507,-117.472,-130.904,-127.593,-100.089,-152.011,-165.444,-130.904,-165.444,-60.0422,-111.963,-125.395,-90.8554,-125.395,-121.482,0,-51.9199,-65.3523,-30.8103,-65.3523,-25.3012,-55.7193,-63.3889,-115.31,-128.742,-94.2022,-128.742,-88.6933,-28.6483,-125.13 0|1:84:26,5,0,2,1,0,37,11:26:919:5,0,2,1,0,37,11:195,0,76,24,0,1405,414:-107.402,-100.249,-173.193,-115.229,-174.698,-189.679,-109.153,-168.622,-183.603,-183.001,-113.382,-172.85,-187.831,-181.755,-187.53,-115.229,-174.698,-189.679,-183.603,-187.831,-189.679,0,-59.4688,-74.4509,-68.3742,-72.6042,-74.4509,-63.3128,-81.7218,-141.19,-156.171,-150.095,-154.323,-156.171,-40.9388,-152.86 1|0:48:4,8,3,8,3,1,12,9:4:145:8,3,8,3,1,12,9:310,116,308,117,40,463,346:-52.6711,-31.3455,-40.7738,-47.0752,-36.383,-58.0087,-28.5825,-17.8899,-33.6202,-38.0117,-44.2653,-33.5723,-49.3023,-30.8095,-55.1996,-50.6634,-39.9703,-55.7001,-37.2079,-52.8907,-62.1996,-15.8457,-5.15341,-20.8843,-2.38795,-18.0726,-24.4713,-24.071,-26.1943,-15.5021,-31.2322,-12.7377,-28.4212,-34.8195,0,-35.3222 0|0:92:21,8,2,8,1,14,5,28:21:777:8,2,8,1,14,5,28:301,78,306,26,544,192,1039:-78.0407,-61.2893,-122.445,-79.821,-120.311,-142.782,-59.319,-99.8102,-118.342,-120.475,-82.3273,-122.818,-141.349,-120.848,-145.59,-42.0959,-82.5873,-101.119,-80.6173,-103.625,-101.446,-68.5995,-109.09,-127.622,-107.121,-130.128,-89.8977,-130.659,0,-40.4925,-59.0243,-38.5217,-61.5305,-21.2988,-47.8024,-55.1365 dDocent_Contig_8212 35 . T A 30.4276 . AB=0.130435;ABP=30.2953;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=276;DPB=276;DPRA=0.454545;EPP=9.52472;EPPR=591.479;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=120;QR=10765;RO=271;RPL=0;RPP=9.52472;RPPR=591.479;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=271;SRP=591.479;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:20,3:20:791:3:120:-4.26421,0,-64.5814 0/0:19:19,0:19:764:0:0:0,-5.71957,-69.0795 0/0:7:7,0:7:269:0:0:0,-2.10721,-24.5713 0/0:14:14,0:14:534:0:0:0,-4.21442,-48.3841 0/0:93:92,0:92:3683:0:0:0,-27.6948,-331.074 0/0:120:119,0:119:4724:0:0:0,-35.8226,-424.973 dDocent_Contig_8213 116 . G T 61.6842 . AB=0.140625;ABP=74.8046;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=280;DPB=280;DPRA=1.33333;EPP=26.8965;EPPR=587.136;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.727273;PAIREDR=0.877323;PAO=0;PQA=0;PQR=0;PRO=0;QA=366;QR=9512;RO=269;RPL=0;RPP=26.8965;RPPR=587.136;RPR=11;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=587.136;SRR=269;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:40,0:40:1413:0:0:0,-12.0412,-127.467 0/0:57:57,0:57:1993:0:0:0,-17.1587,-179.641 0/0:41:41,0:41:1456:0:0:0,-12.3422,-131.336 0/1:64:55,9:55:1947:9:296:-7.69129,0,-156.241 0/0:30:30,0:30:1053:0:0:0,-9.0309,-95.08 0/0:48:46,2:46:1650:2:70:0,-7.80211,-142.142 dDocent_Contig_8214 87 . A C 33.9478 . AB=0.173913;ABP=24.253;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=1X;DP=105;DPB=105;DPRA=1.14286;EPP=18.2106;EPPR=215.815;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=241;QR=3368;RO=98;RPL=7;RPP=18.2106;RPPR=215.815;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=98;SRP=215.815;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:8:7,1:7:240:1:35:-1.09039,0,-19.5269 0/0:15:15,0:15:522:0:0:0,-4.51545,-47.3101 0/0:33:30,3:30:1025:3:105:0,-0.137828,-82.7625 0/1:15:12,3:12:408:3:101:-4.90815,0,-32.5319 0/0:13:13,0:13:451:0:0:0,-3.91339,-40.9218 0/0:21:21,0:21:722:0:0:0,-6.32163,-65.2999 dDocent_Contig_8216 7 . G A 1951.8 . AB=0.213675;ABP=336.266;AC=4;AF=0.333333;AN=12;AO=103;CIGAR=1X;DP=631;DPB=631;DPRA=1.26744;EPP=226.672;EPPR=1123.49;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.990291;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3887;QR=16212;RO=516;RPL=0;RPP=226.672;RPPR=1123.49;RPR=103;RUN=1;SAF=103;SAP=226.672;SAR=0;SRF=516;SRP=1123.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:77:74,3:74:2368:3:117:0,-12.2689,-202.43 0/1:93:75,17:75:2271:17:641:-30.2038,0,-176.792 0/0:86:85,0:85:2633:0:0:0,-25.5875,-237.065 0/1:131:113,14:113:3644:14:500:-6.92848,0,-289.762 0/1:89:47,40:47:1370:40:1515:-110.305,0,-97.234 0/1:155:122,29:122:3926:29:1114:-54.9639,0,-307.91 dDocent_Contig_8217 8 . C T 43.4874 . AB=0.162791;ABP=45.4803;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=1X;DP=211;DPB=211;DPRA=0.511905;EPP=18.2106;EPPR=445.991;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.72549;PAO=0;PQA=0;PQR=0;PRO=0;QA=221;QR=7035;RO=204;RPL=0;RPP=18.2106;RPPR=445.991;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=204;SRP=445.991;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:20,4:20:651:4:126:-4.42443,0,-51.6592 0/1:19:16,3:16:561:3:95:-3.14066,0,-45.0956 0/0:26:26,0:26:899:0:0:0,-7.82678,-81.2108 0/0:56:56,0:56:1882:0:0:0,-16.8577,-169.62 0/0:26:26,0:26:930:0:0:0,-7.82678,-84.0071 0/0:60:60,0:60:2112:0:0:0,-18.0618,-190.319 dDocent_Contig_8218 10 . C T 1766.46 . AB=0.153747;ABP=809.025;AC=3;AF=0.25;AN=12;AO=146;CIGAR=3M1X;DP=1452;DPB=1452;DPRA=4.4726;EPP=320.045;EPPR=2684.78;GTI=0;LEN=1;MEANALT=4.25;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5491;QR=43179;RO=1235;RPL=0;RPP=320.045;RPPR=2684.78;RPR=146;RUN=1;SAF=146;SAP=320.045;SAR=0;SRF=1235;SRP=2684.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:77:73,0,4,0:73:2616:0,4,0:0,44,0:0,-21.9752,-235.531,-19.1093,-232.788,-231.584,-21.9752,-235.531,-232.788,-235.531 0|1:175:142,7,3,23:142:4908:7,3,23:262,45,835:-25.4445,-46.7259,-443.348,-65.0635,-442.312,-462.867,0,-377.301,-395.617,-391.836 0|0:69:63,4,2,0:63:2212:4,2,0:148,22,0:0,-6.68432,-185.717,-17.6735,-185.55,-197.057,-18.9649,-186.921,-197.659,-199.03 0|1:120:95,0,1,22:95:3342:0,1,22:0,11,810:-37.6977,-66.2955,-338.309,-65.6168,-337.622,-337.321,0,-272.096,-271.41,-265.474 0|0:532:481,0,19,27:481:16821:0,19,27:0,235,1004:0,-144.795,-1513.06,-129.448,-1497.64,-1491.92,-62.5166,-1430.91,-1415.48,-1422.78 0|1:479:381,0,20,74:381:13280:0,20,74:0,278,2842:-118.726,-233.418,-1313.24,-214.468,-1294.25,-1288.23,0,-1079.98,-1061,-1057.71 dDocent_Contig_8219 7 . G A 11711.5 . AB=0.142157;ABP=229.908;AC=6;AF=0.5;AN=12;AO=375;CIGAR=1X;DP=670;DPB=670;DPRA=2.85;EPP=817.312;EPPR=621.88;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.978947;PAO=0;PQA=0;PQR=0;PRO=0;QA=14269;QR=9006;RO=285;RPL=0;RPP=817.312;RPPR=621.88;RPR=375;RUN=1;SAF=375;SAP=817.312;SAR=0;SRF=285;SRP=621.88;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:60:58,0:58:1666:0:0:0,-17.4597,-150.042 0/1:126:101,20:101:3202:20:771:-33.129,0,-251.804 0/0:40:38,0:38:1271:0:0:0,-11.4391,-114.498 0/1:78:68,9:68:2312:9:338:-7.45812,0,-185.006 1/1:91:5,86:5:117:86:3303:-286.653,-16.6337,0 1/1:275:15,260:15:438:260:9857:-847.13,-43.0873,0 dDocent_Contig_8220 27 . G T 553.845 . AB=0.208633;ABP=105.507;AC=4;AF=0.333333;AN=12;AO=29;CIGAR=1X;DP=232;DPB=232;DPRA=0.747312;EPP=65.983;EPPR=443.819;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1141;QR=8023;RO=203;RPL=0;RPP=65.983;RPPR=443.819;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=203;SRP=443.819;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:19,5:19:752:5:203:-11.4283,0,-60.7769 0/0:39:39,0:39:1534:0:0:0,-11.7402,-138.3 0/1:57:42,15:42:1655:15:577:-35.0928,0,-132.017 0/1:43:39,4:39:1560:4:159:-1.74767,0,-127.693 0/1:15:10,5:10:397:5:202:-14.0464,0,-31.5716 0/0:54:54,0:54:2125:0:0:0,-16.2556,-191.429 dDocent_Contig_8221 25 . T G 2568.45 . AB=0.245536;ABP=254.979;AC=3;AF=0.3;AN=10;AO=113;CIGAR=1X;DP=608;DPB=608;DPRA=1.19762;EPP=248.387;EPPR=1077.89;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4522;QR=19366;RO=495;RPL=0;RPP=248.387;RPPR=1077.89;RPR=113;RUN=1;SAF=113;SAP=248.387;SAR=0;SRF=495;SRP=1077.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:101:83,18:83:3259:18:705:-33.3672,0,-262.983 0/0:55:52,3:52:2069:3:119:0,-5.46125,-175.302 0/1:107:85,22:85:3355:22:891:-48.287,0,-269.802 0/1:240:170,70:170:6622:70:2807:-180.492,0,-523.507 ./.:.:.:.:.:.:.:. 0/0:105:105,0:105:4061:0:0:0,-31.6081,-365.5 dDocent_Contig_8222 12 . T G 227.505 . AB=0.125683;ABP=225.723;AC=2;AF=0.166667;AN=12;AO=30;CIGAR=1X;DP=495;DPB=495;DPRA=0.795812;EPP=68.1545;EPPR=1004.08;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9054;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.997849;PAO=0;PQA=0;PQR=0;PRO=0;QA=1161;QR=17466;RO=465;RPL=0;RPP=68.1545;RPPR=1012.74;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=464;SRP=1004.08;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:75:67,8:67:2490:8:305:-5.22746,0,-201.73 0/0:95:95,0:95:3557:0:0:0,-28.5978,-320.259 0/0:81:75,6:75:2832:6:238:0,-2.59077,-231.38 0/1:108:93,15:93:3510:15:588:-20.7449,0,-283.525 0/0:40:39,1:39:1461:1:30:0,-9.04163,-128.765 0/0:96:96,0:96:3616:0:0:0,-28.8989,-325.566 dDocent_Contig_8223 8 . C T 305.435 . AB=0.178808;ABP=138.317;AC=3;AF=0.25;AN=12;AO=32;CIGAR=1X;DP=292;DPB=292;DPRA=1.5697;EPP=72.4974;EPPR=567.593;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1082;QR=8939;RO=260;RPL=0;RPP=72.4974;RPPR=567.593;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=260;SRP=567.593;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:51,3:51:1712:3:116:0,-5.43791,-143.51 0/1:66:55,11:55:1914:11:364:-13.2001,0,-152.633 0/1:71:60,11:60:2043:11:365:-11.7888,0,-162.733 0/0:54:52,2:52:1802:2:74:0,-9.23019,-155.394 0/1:14:9,5:9:338:5:163:-10.7764,0,-26.5601 0/0:33:33,0:33:1130:0:0:0,-9.93399,-101.985 dDocent_Contig_8224 48 . T A 135.006 . AB=0.25;ABP=16.0391;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=153;DPB=153;DPRA=0.930233;EPP=16.0391;EPPR=322.217;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=243;QR=5833;RO=147;RPL=0;RPP=16.0391;RPPR=322.217;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=147;SRP=322.217;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1321:0:0:0,-9.93399,-119.152 0/0:15:15,0:15:586:0:0:0,-4.51545,-53.068 0/0:7:7,0:7:266:0:0:0,-2.10721,-24.2979 0/0:59:59,0:59:2376:0:0:0,-17.7608,-213.988 0/1:24:18,6:18:688:6:243:-15.0235,0,-55.013 0/0:15:15,0:15:596:0:0:0,-4.51545,-53.9703 dDocent_Contig_8225 7 . G A 98.7712 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=18;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=226;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:39:-3.64612,-0.30103,0 1/1:5:0,5:0:0:5:187:-5.92876,-1.50515,0 ./.:.:.:.:.:.:.:. dDocent_Contig_8226 80 . C A 1038.91 . AB=0.306358;ABP=59.3556;AC=5;AF=0.416667;AN=12;AO=56;CIGAR=1X;DP=225;DPB=225;DPRA=0;EPP=124.613;EPPR=369.989;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.803571;PAIREDR=0.786982;PAO=0;PQA=0;PQR=0;PRO=0;QA=1920;QR=5770;RO=169;RPL=56;RPP=124.613;RPPR=369.989;RPR=0;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=169;SRP=369.989;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:17:12,5:12:411:5:174:-10.8842,0,-32.2016 0/1:61:44,17:44:1484:17:581:-34.25,0,-115.487 0/1:32:17,15:17:564:15:509:-36.5002,0,-41.4399 0/0:52:49,3:49:1684:3:103:0,-6.04359,-142.236 0/1:16:10,6:10:349:6:209:-14.3346,0,-26.9302 0/1:47:37,10:37:1278:10:344:-17.1439,0,-101.175 dDocent_Contig_8227 10 . A G 1039.55 . AB=0.151456;ABP=546.431;AC=1;AF=0.0833333;AN=12;AO=114;CIGAR=1X;DP=1746;DPB=1746;DPRA=1.49785;EPP=250.558;EPPR=3542.51;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996319;PAO=0;PQA=0;PQR=0;PRO=0;QA=4248;QR=61158;RO=1630;RPL=0;RPP=250.558;RPPR=3542.51;RPR=114;RUN=1;SAF=114;SAP=250.558;SAR=0;SRF=1630;SRP=3542.51;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:148:147,0:147:5485:0:0:0,-44.2514,-493.182 0/0:217:206,11:206:7685:11:396:0,-29.3487,-655.449 0/0:315:290,25:290:10991:25:959:0,-8.20661,-902.021 0/1:515:437,78:437:16373:78:2893:-105.478,0,-1317.6 0/0:180:180,0:180:6708:0:0:0,-54.1854,-603.544 0/0:371:370,0:370:13916:0:0:0,-111.381,-1251.26 dDocent_Contig_8228 12 . G A 31.9309 . AB=0.0980392;ABP=146.157;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=325;DPB=325;DPRA=0.652482;EPP=35.5824;EPPR=676.167;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.866667;PAIREDR=0.848387;PAO=0;PQA=0;PQR=0;PRO=0;QA=582;QR=12038;RO=310;RPL=0;RPP=35.5824;RPPR=676.167;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=310;SRP=676.167;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:53:49,4:49:1904:4:154:0,-1.72427,-157.355 0/0:82:82,0:82:3208:0:0:0,-24.6845,-288.831 0/0:29:28,1:28:1061:1:39:0,-4.83331,-91.8835 0/1:46:41,5:41:1594:5:202:-4.71411,0,-129.86 0/0:59:59,0:59:2258:0:0:0,-17.7608,-203.407 0/1:56:51,5:51:2013:5:187:-0.333527,0,-164.516 dDocent_Contig_8229 7 . G A 256.707 . AB=0.323529;ABP=12.2071;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=219;DPB=219;DPRA=0.979592;EPP=29.068;EPPR=443.819;GTI=0;LEN=1;MEANALT=1;MQM=57.25;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.916667;PAIREDR=0.960591;PAO=0;PQA=0;PQR=0;PRO=0;QA=449;QR=6516;RO=203;RPL=0;RPP=29.068;RPPR=443.819;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=203;SRP=443.819;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:39,0:39:1243:0:0:0,-11.7402,-112.015 0/0:38:37,1:37:1198:1:37:0,-8.78045,-105.425 0/0:24:23,0:23:764:0:0:0,-6.92369,-68.9342 0/0:64:63,0:63:2012:0:0:0,-18.9649,-181.177 0/0:19:18,0:18:611:0:0:0,-5.41854,-54.9595 0/1:34:23,11:23:688:11:412:-27.1936,0,-51.9591 dDocent_Contig_8230 33 . T A 164.638 . AB=0.118421;ABP=195.243;AC=3;AF=0.25;AN=12;AO=18;CIGAR=1X;DP=538;DPB=538;DPRA=0.393782;EPP=42.0968;EPPR=1132.18;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990385;PAO=0;PQA=0;PQR=0;PRO=0;QA=719;QR=20689;RO=520;RPL=0;RPP=42.0968;RPPR=1132.18;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=520;SRP=1132.18;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:50,0:50:1956:0:0:0,-15.0515,-176.236 0/1:72:66,6:66:2624:6:241:-0.392142,0,-214.618 0/1:38:33,5:33:1296:5:199:-6.8483,0,-105.466 0/1:42:35,7:35:1394:7:279:-12.8355,0,-113.073 0/0:168:168,0:168:6737:0:0:0,-50.573,-606.016 0/0:168:168,0:168:6682:0:0:0,-50.573,-601.077 dDocent_Contig_8231 9 . T A 47.256 . AB=0.091195;ABP=464.619;AC=1;AF=0.0833333;AN=12;AO=185;CIGAR=1X2M1X1M1X1M1X2M1X;DP=3199;DPB=3199;DPRA=0;EPP=404.733;EPPR=6411.03;GTI=0;LEN=1;MEANALT=5.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.989189;PAIREDR=0.997967;PAO=0;PQA=0;PQR=0;PRO=0;QA=7037;QR=112825;RO=2951;RPL=0;RPP=404.733;RPPR=6411.03;RPR=185;RUN=1;SAF=185;SAP=404.733;SAR=0;SRF=2951;SRP=6411.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:318:284,29:284:10772:29:1114:-5.94744,0,-874.458 0|0:606:583,19:583:22310:19:708:0,-117.531,-1942.52 0|0:340:324,12:324:12461:12:460:0,-59.7299,-1079.16 0|0:544:496,44:496:18897:44:1684:0,-10.9788,-1547.89 0|0:756:698,51:698:26705:51:1906:0,-53.9682,-2230.03 0|0:635:566,30:566:21680:30:1165:0,-74.6576,-1844.76 dDocent_Contig_8232 98 . N A 265.067 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=279;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:30:-2.99957,-0.30103,0 1/1:3:0,3:0:0:3:94:-8.77165,-0.90309,0 1/1:5:0,5:0:0:5:155:-14.2572,-1.50515,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_8233 209 . N G 148.752 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=7.37776;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=161;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:161:-14.8749,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_8234 141 . C T 1753.13 . AB=0.3125;ABP=66.5259;AC=6;AF=0.5;AN=12;AO=65;CIGAR=1X3M;DP=208;DPB=208;DPRA=0;EPP=144.156;EPPR=185.414;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.676923;PAIREDR=0.619048;PAO=0;PQA=0;PQR=0;PRO=0;QA=2357;QR=3195;RO=84;RPL=65;RPP=144.156;RPPR=185.414;RPR=0;RUN=1;SAF=0;SAP=144.156;SAR=65;SRF=0;SRP=185.414;SRR=84;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:31:10,10,11:10:381:10,11:371,380:-27.8442,-0.48498,-28.7449,0,-0.905835,-27.9469 0|1:37:14,11,12:14:532:11,12:421,457:-33.2712,-2.93564,-43.2542,0,-9.0786,-40.0165 0|1:26:12,6,8:12:458:6,8:223,305:-21.4137,-6.77926,-42.5494,0,-19.3351,-35.1745 0|1:29:11,9,9:11:413:9,9:333,314:-23.9395,0,-31.1358,-1.72565,-8.32127,-32.8499 0|1:41:14,16,11:14:532:16,11:611,398:-45.9285,0,-38.8232,-17.6656,-11.1621,-57.9829 0|1:44:23,7,14:23:879:7,14:248,503:-34.1045,-20.8314,-90.863,0,-51.954,-67.9315 dDocent_Contig_8235 7 . G A 160.023 . AB=0.228571;ABP=25.4075;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=150;DPB=150;DPRA=1.52174;EPP=20.3821;EPPR=309.188;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=306;QR=4469;RO=141;RPL=0;RPP=20.3821;RPPR=309.188;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=141;SRP=309.188;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:13:13,0:13:414:0:0:0,-3.91339,-37.5602 0/0:40:40,0:40:1326:0:0:0,-12.0412,-119.608 0/0:26:26,0:26:831:0:0:0,-7.82678,-75.0715 0/0:31:31,0:31:1007:0:0:0,-9.33193,-90.9047 0/1:35:26,8:26:783:8:306:-17.5252,0,-60.3921 0/0:5:5,0:5:108:0:0:0,-1.50515,-9.92967 dDocent_Contig_8236 11 . T G 3755.34 . AB=0.317021;ABP=139.693;AC=6;AF=0.5;AN=12;AO=149;CIGAR=2X6M;DP=470;DPB=475.25;DPRA=0;EPP=326.56;EPPR=558.907;GTI=0;LEN=1;MEANALT=2.83333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.697987;PAIREDR=0.53125;PAO=0;PQA=0;PQR=0;PRO=0;QA=5653;QR=9896;RO=256;RPL=0;RPP=326.56;RPPR=558.907;RPR=149;RUN=1;SAF=149;SAP=326.56;SAR=0;SRF=256;SRP=558.907;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:70:37,7,8,18:37:1417:7,8,18:270,303,691:-45.568,-34.5338,-148.712,-31.8672,-125.98,-145.743,0,-94.1138,-91.4463,-110.867 0|1:126:84,6,6,29:84:3235:6,6,29:229,217,1089:-63.9203,-70.4176,-334.231,-71.5029,-318.334,-335.314,0,-246.849,-247.932,-256.906 0|1:81:48,7,4,22:48:1849:7,4,22:275,138,841:-54.5517,-46.3789,-196.088,-57.7982,-186.99,-208.405,0,-129.199,-140.614,-145.196 0|1:104:58,20,3,23:58:2267:20,3,23:770,119,805:-47.9976,-2.22503,-182.609,-55.6597,-178.834,-241.151,0,-123.166,-176.588,-179.46 0|1:35:10,0,0,25:10:386:0,0,25:0,0,980:-77.9608,-80.9711,-112.668,-80.9711,-112.668,-112.668,0,-32.0843,-32.0843,-24.5586 0|1:54:19,2,0,32:19:742:2,0,32:78,0,1247:-96.7575,-96.0659,-156.461,-102.477,-157.063,-163.475,0,-54.5839,-60.9949,-51.362 dDocent_Contig_8238 113 . T A 58.7533 . AB=0.166667;ABP=37.7539;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=233;DPB=233;DPRA=0.913706;EPP=16.0391;EPPR=495.935;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=199;QR=7633;RO=227;RPL=0;RPP=16.0391;RPPR=495.935;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=495.935;SRR=227;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:318:0:0:0,-3.0103,-28.9277 0/0:37:37,0:37:1234:0:0:0,-11.1381,-111.354 0/0:50:50,0:50:1703:0:0:0,-15.0515,-153.556 0/1:36:30,6:30:1011:6:199:-7.3982,0,-80.4592 0/0:57:57,0:57:1934:0:0:0,-17.1587,-174.337 0/0:43:43,0:43:1433:0:0:0,-12.9443,-129.258 dDocent_Contig_8240 7 . G A 154.508 . AB=0.219512;ABP=31.0276;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=189;DPB=189;DPRA=1.77941;EPP=33.4109;EPPR=376.504;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=514;QR=5556;RO=172;RPL=0;RPP=33.4109;RPPR=376.504;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=172;SRP=376.504;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:24,0:24:730:0:0:0,-7.22472,-65.7802 0/0:32:31,0:31:1004:0:0:0,-9.33193,-90.5245 0/0:11:11,0:11:357:0:0:0,-3.31133,-32.4376 0/1:41:32,9:32:1020:9:322:-16.9732,0,-79.7264 0/0:37:34,3:34:1105:3:117:0,-0.227729,-88.8129 0/0:43:40,2:40:1340:2:75:0,-5.72117,-113.826 dDocent_Contig_8241 1 . N G 118.945 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=120;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:79:-7.49724,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_8242 1 . N G 116.025 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=117;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:78:-7.4033,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:39:-3.89656,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_8243 24 . T A 9293.77 . AB=0.145522;ABP=295.511;AC=0;AF=0;AN=12;AO=39;CIGAR=1X2M1X1M1X4M;DP=1386;DPB=1386.4;DPRA=0;EPP=87.6977;EPPR=1557.78;GTI=0;LEN=1;MEANALT=3.5;MQM=59.9487;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.98324;PAO=0;PQA=0;PQR=0;PRO=0;QA=1516;QR=28104;RO=716;RPL=0;RPP=87.6977;RPPR=1557.78;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=716;SRP=1557.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:151:56,0,38,0,51:56:2190:0,38,0,51:0,1492,0,2025:-149.575,-166.432,-346.486,-43.7234,-223.776,-212.337,-166.432,-346.486,-223.776,-346.486,0,-180.055,-57.3445,-180.055,-164.703 0|0:338:186,0,70,0,65:186:7277:0,70,0,65:0,2759,0,2592:-170.998,-226.989,-825.298,0,-598.311,-577.239,-226.989,-825.298,-598.311,-825.298,-14.0765,-612.389,-385.402,-612.389,-592.822 0|0:294:173,0,15,9,83:173:6799:0,15,9,83:0,596,361,3282:-216.382,-268.46,-827.686,-219.39,-778.617,-774.102,-238.716,-797.943,-748.874,-795.234,0,-559.235,-510.166,-529.492,-534.25 0|0:335:170,0,63,41,51:170:6695:0,63,41,51:0,2448,1616,2018:-149.977,-201.152,-751.927,0,-550.775,-531.81,-68.2076,-618.984,-417.832,-606.642,-35.0866,-585.864,-384.712,-452.921,-570.511 0|0:78:48,11,0,0,14:48:1892:11,0,0,14:428,0,0,541:-29.9946,-9.25676,-161.637,-44.444,-164.949,-200.123,-44.444,-164.949,-200.123,-200.123,0,-120.522,-155.697,-155.697,-151.482 0|0:190:83,28,0,0,78:83:3251:28,0,0,78:1088,0,0,3036:-223.673,-159.26,-418.155,-248.658,-426.584,-515.982,-248.658,-426.584,-515.982,-515.982,0,-177.926,-267.324,-267.324,-243.843 dDocent_Contig_8244 44 . T C 4540.29 . AB=0.367615;ABP=72.5782;AC=6;AF=0.5;AN=12;AO=168;CIGAR=1X;DP=457;DPB=457;DPRA=0;EPP=367.818;EPPR=630.566;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.994048;PAIREDR=0.99308;PAO=0;PQA=0;PQR=0;PRO=0;QA=6679;QR=10609;RO=289;RPL=0;RPP=367.818;RPPR=630.566;RPR=168;RUN=1;SAF=168;SAP=367.818;SAR=0;SRF=289;SRP=630.566;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:39:30,9:30:1086:9:369:-21.8353,0,-86.3043 0/1:65:50,15:50:1783:15:598:-34.5906,0,-141.157 0/1:128:116,12:116:4337:12:481:-5.10794,0,-351.874 0/1:57:39,18:39:1434:18:712:-47.2486,0,-112.183 0/1:97:28,69:28:1030:69:2701:-214.014,0,-63.8045 0/1:71:26,45:26:939:45:1818:-142.454,0,-63.4433 dDocent_Contig_8245 1 . N G 156.153 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=6.91895;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=34.2;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=180;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=1;SAP=6.91895;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.28761,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:71:-5.84149,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:74:-6.00758,-0.60206,0 dDocent_Contig_8246 33 . G A 41014.8 . AB=0.432962;ABP=132.569;AC=5;AF=0.416667;AN=12;AO=1442;CIGAR=1X;DP=4228;DPB=4228;DPRA=0;EPP=3134.27;EPPR=6041.88;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=56982;QR=109373;RO=2781;RPL=0;RPP=3134.27;RPPR=6041.88;RPR=1442;RUN=1;SAF=1442;SAP=3134.27;SAR=0;SRF=2781;SRP=6041.88;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:611:307,303:307:11989:303:11979:-893.577,0,-894.544 0/1:601:171,428:171:6738:428:16955:-1343.9,0,-425.436 0/1:376:214,162:214:8432:162:6374:-460.222,0,-645.234 0/1:574:209,365:209:8199:365:14450:-1126.64,0,-564.715 0/1:1157:978,179:978:38603:179:7055:-286.355,0,-3122.53 0/0:909:902,5:902:35412:5:169:0,-257.877,-3168.47 dDocent_Contig_8247 18 . T C 1131.52 . AB=0.341085;ABP=31.3068;AC=5;AF=0.416667;AN=12;AO=46;CIGAR=1X;DP=158;DPB=158;DPRA=0;EPP=102.898;EPPR=246.215;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.804348;PAIREDR=0.723214;PAO=0;PQA=0;PQR=0;PRO=0;QA=1852;QR=4424;RO=112;RPL=0;RPP=102.898;RPPR=246.215;RPR=46;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=112;SRP=246.215;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:27,2:27:1062:2:81:0,-1.04414,-88.1865 0/1:37:27,10:27:1068:10:394:-24.6789,0,-85.2743 0/1:22:19,3:19:746:3:119:-4.47235,0,-60.838 0/1:25:16,9:16:642:9:365:-25.6889,0,-50.5881 0/1:28:13,15:13:510:15:611:-46.8986,0,-37.8129 0/1:17:10,7:10:396:7:282:-20.6351,0,-30.8817 dDocent_Contig_8248 10 . C T 14926.9 . AB=0.0429594;ABP=763.228;AC=0;AF=0;AN=12;AO=18;CIGAR=1M1X11M;DP=1424;DPB=1460;DPRA=0;EPP=42.0968;EPPR=1216.86;GTI=0;LEN=1;MEANALT=6.33333;MQM=60;MQMR=60;NS=6;NUMALT=6;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=666;QR=21567;RO=559;RPL=0;RPP=42.0968;RPPR=1216.86;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=559;SRP=1216.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:70:22,0,9,30,6,0,2:22:851:0,9,30,6,0,2:0,320,1203,225,0,80:-92.5111,-99.1337,-169.031,-73.0678,-142.962,-140.253,0,-69.9084,-43.8414,-60.8775,-80.706,-150.602,-124.534,-51.4793,-148.796,-99.1337,-169.031,-142.962,-69.9084,-150.602,-169.031,-92.5433,-162.441,-136.372,-63.3173,-144.012,-162.441,-161.839 0|0:197:99,0,22,57,5,3,10:99:3795:0,22,57,5,3,10:0,722,2255,189,122,405:-155.782,-185.584,-497.039,-127.28,-438.727,-432.104,0,-311.47,-253.16,-294.311,-170.094,-481.549,-423.237,-295.98,-480.044,-175.52,-486.976,-428.663,-301.406,-471.486,-486.073,-152.186,-463.643,-405.331,-278.073,-448.153,-453.579,-460.632 0|0:152:92,8,3,31,7,8,1:92:3563:8,3,31,7,8,1:320,98,1253,252,304,41:-75.6177,-76.9529,-367.228,-95.4029,-361.724,-387.18,0,-266.333,-284.781,-283.36,-82.7672,-349.088,-367.535,-272.144,-373.34,-78.3891,-344.711,-363.159,-267.767,-350.522,-368.662,-99.9281,-366.252,-384.699,-289.308,-372.063,-367.686,-392.31 0|0:123:82,0,7,32,0,0,1:82:3097:0,7,32,0,0,1:0,246,1265,0,0,37:-79.4548,-104.139,-357.956,-84.1253,-337.937,-335.83,0,-253.858,-233.84,-244.225,-104.139,-357.956,-337.937,-253.858,-357.956,-104.139,-357.956,-337.937,-253.858,-357.956,-357.956,-101.113,-354.929,-334.91,-250.831,-354.929,-354.929,-354.628 0|0:514:163,0,230,3,0,0,112:163:6327:0,230,3,0,0,112:0,7689,122,0,0,4503:-573.257,-622.325,-1142.18,0,-519.836,-450.599,-612.261,-1132.11,-509.773,-1131.21,-622.325,-1142.18,-519.836,-1132.11,-1142.18,-622.325,-1142.18,-519.836,-1132.11,-1142.18,-1142.18,-251.228,-771.091,-148.754,-761.027,-771.091,-771.091,-737.375 0|0:368:101,0,197,0,0,0,63:101:3934:0,197,0,0,0,63:0,6860,0,0,0,2499:-527.29,-557.694,-881.028,0,-323.329,-264.027,-557.694,-881.028,-323.329,-881.028,-557.694,-881.028,-323.329,-881.028,-881.028,-557.694,-881.028,-323.329,-881.028,-881.028,-881.028,-351.989,-675.329,-117.631,-675.329,-675.329,-675.329,-656.364 dDocent_Contig_8249 11 . C T 34.5939 . AB=0.15;ABP=24.2907;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=177;DPB=177;DPRA=0.661654;EPP=11.6962;EPPR=378.675;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.890173;PAO=0;PQA=0;PQR=0;PRO=0;QA=157;QR=6666;RO=173;RPL=0;RPP=11.6962;RPPR=378.675;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=173;SRP=378.675;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:1113:0:0:0,-8.72987,-100.448 0/1:20:17,3:17:623:3:118:-4.98212,0,-50.3681 0/0:24:23,1:23:907:1:39:0,-3.32816,-78.0419 0/0:32:32,0:32:1248:0:0:0,-9.63296,-112.59 0/0:42:42,0:42:1620:0:0:0,-12.6433,-146.033 0/0:30:30,0:30:1155:0:0:0,-9.0309,-104.223 dDocent_Contig_8250 24 . G A 137.748 . AB=0.118519;ABP=173.656;AC=6;AF=0.5;AN=12;AO=16;CIGAR=3X;DP=153;DPB=153;DPRA=0;EPP=37.7539;EPPR=270.101;GTI=0;LEN=1;MEANALT=2.4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=641;QR=4798;RO=123;RPL=0;RPP=37.7539;RPPR=270.101;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=123;SRP=270.101;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:18:16,2,0:16:615:2,0:81,0:-2.26719,0,-50.2671,-7.08367,-50.8692,-57.5506 0|1:18:13,2,2:13:516:2,2:78,81:-2.77039,-0.27731,-42.1475,0,-36.0694,-41.8782 0|1:11:10,0,1:10:397:0,1:0,41:-0.783237,-3.79354,-36.4648,0,-33.0796,-32.7786 0|1:36:31,0,5:31:1219:0,5:0,198:-7.36067,-16.6926,-116.958,0,-100.661,-99.1555 0|1:29:20,3,4:20:772:3,4:115,161:-7.25866,-3.84378,-66.3319,0,-53.963,-62.1974 0|1:41:33,2,4:33:1279:2,4:80,160:-3.2513,-6.59368,-111.058,0,-98.4783,-103.865 dDocent_Contig_8252 11 . C A 344.475 . AB=0.185841;ABP=99.881;AC=3;AF=0.25;AN=12;AO=31;CIGAR=2M1X7M;DP=316;DPB=309.6;DPRA=2.79167;EPP=70.3259;EPPR=595.822;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1132;QR=10446;RO=273;RPL=0;RPP=70.3259;RPPR=595.822;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=273;SRP=595.822;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:25:13,4,8:13:495:4,8:85,285:-19.4027,-16.9193,-56.3285,0,-34.3215,-38.3184 0|0:155:141,2,10:141:5403:2,10:39,362:0,-39.5607,-482.386,-12.828,-453.443,-453.338 0|1:46:34,2,9:34:1307:2,9:72,347:-18.2657,-22.6304,-129.318,0,-101.428,-104.592 0|1:42:38,0,4:38:1471:0,4:0,138:-0.113911,-11.5531,-132.423,0,-121.218,-120.014 0|0:9:9,0,0:9:336:0,0:0,0:0,-2.70927,-30.5904,-2.70927,-30.5904,-30.5904 0|0:39:38,0,0:38:1434:0,0:0,0:0,-11.4391,-129.067,-11.4391,-129.067,-129.067 dDocent_Contig_8254 98 . N A 31184.2 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=1248;CIGAR=1X;DP=1259;DPB=1259;DPRA=0;EPP=2713.01;EPPR=0;GTI=0;LEN=1;MEANALT=2.33333;MQM=59.9623;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.703526;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=34634;QR=0;RO=0;RPL=1248;RPP=2713.01;RPPR=0;RPR=0;RUN=1;SAF=1248;SAP=2713.01;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:380:0,378:0:0:378:10607:-954.706,-113.789,0 1/1:344:0,342:0:0:342:9586:-862.827,-102.952,0 1/1:220:0,216:0:0:216:5976:-537.908,-65.0225,0 1/1:256:0,255:0:0:255:7014:-631.345,-76.7627,0 1/1:35:0,34:0:0:34:898:-80.9153,-10.235,0 1/1:24:0,23:0:0:23:553:-49.9459,-6.92369,0 dDocent_Contig_8255 7 . G T 98.7272 . AB=0.25;ABP=18.2106;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=115;DPB=115;DPRA=0.777778;EPP=24.725;EPPR=228.843;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=58.9423;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.961538;PAO=0;PQA=0;PQR=0;PRO=0;QA=250;QR=3318;RO=104;RPL=0;RPP=24.725;RPPR=228.843;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=104;SRP=228.843;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:29,0:29:984:0:0:0,-8.72987,-88.5734 0/1:28:21,7:21:679:7:217:-11.3954,0,-52.9765 0/0:10:9,1:9:278:1:11:0,-1.9103,-24.22 0/0:26:25,1:25:779:1:11:0,-6.72678,-69.2895 0/0:6:5,1:5:172:1:11:0,-0.706185,-14.7168 0/0:15:15,0:15:426:0:0:0,-4.51545,-33.0793 dDocent_Contig_8256 9 . G T 97.6179 . AB=0.195652;ABP=40.0197;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=301;DPB=301;DPRA=0.901961;EPP=22.5536;EPPR=637.08;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.989726;PAO=0;PQA=0;PQR=0;PRO=0;QA=276;QR=10331;RO=292;RPL=0;RPP=22.5536;RPPR=637.08;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=292;SRP=637.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:47:47,0:47:1719:0:0:0,-14.1484,-154.971 0/0:58:58,0:58:2040:0:0:0,-17.4597,-183.83 0/0:81:81,0:81:2892:0:0:0,-24.3834,-260.461 0/0:38:38,0:38:1304:0:0:0,-11.4391,-117.635 0/0:31:31,0:31:1108:0:0:0,-9.33193,-100.01 0/1:46:37,9:37:1268:9:276:-11.2847,0,-100.543 dDocent_Contig_8257 94 . A C 66.5904 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X3M8X;DP=2;DPB=54.1667;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=1294;PRO=39;QA=74;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:74:-6.65795,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_8258 36 . G A 2696.22 . AB=0.4125;ABP=18.9706;AC=6;AF=0.5;AN=12;AO=99;CIGAR=1X;DP=240;DPB=240;DPRA=0;EPP=217.986;EPPR=309.188;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.858586;PAIREDR=0.87234;PAO=0;PQA=0;PQR=0;PRO=0;QA=3901;QR=5501;RO=141;RPL=0;RPP=217.986;RPPR=309.188;RPR=99;RUN=1;SAF=99;SAP=217.986;SAR=0;SRF=141;SRP=309.188;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:21,13:21:831:13:511:-36.0992,0,-64.8694 0/1:41:22,19:22:835:19:746:-55.1206,0,-63.1196 0/1:30:22,8:22:874:8:325:-20.5887,0,-69.9345 0/1:53:35,18:35:1374:18:695:-46.9222,0,-107.968 0/1:41:21,20:21:801:20:789:-58.9892,0,-60.0521 0/1:41:20,21:20:786:21:835:-63.1243,0,-58.72 dDocent_Contig_8260 51 . G A 746.504 . AB=0.245283;ABP=92.6143;AC=4;AF=0.333333;AN=12;AO=40;CIGAR=1X;DP=255;DPB=255;DPRA=1.0439;EPP=89.8692;EPPR=469.877;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.45;PAIREDR=0.716279;PAO=0;PQA=0;PQR=0;PRO=0;QA=1456;QR=7782;RO=215;RPL=40;RPP=89.8692;RPPR=469.877;RPR=0;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=215;SRP=469.877;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:32,6:32:1125:6:230:-9.62751,0,-90.104 0/0:55:54,1:54:1930:1:30:0,-13.5571,-170.96 0/0:41:41,0:41:1522:0:0:0,-12.3422,-137.259 0/1:52:34,18:34:1208:18:638:-42.0849,0,-93.3553 0/1:27:23,4:23:848:4:149:-5.64571,0,-68.5144 0/1:42:31,11:31:1149:11:409:-24.5142,0,-91.0683 dDocent_Contig_8261 7 . G T 1499.91 . AB=0.602273;ABP=11.0053;AC=4;AF=0.333333;AN=12;AO=54;CIGAR=1X;DP=141;DPB=141;DPRA=0.629412;EPP=120.27;EPPR=191.928;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2029;QR=2650;RO=87;RPL=0;RPP=120.27;RPPR=191.928;RPR=54;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=87;SRP=191.928;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:14:6,8:6:176:8:309:-23.9585,0,-11.9114 0/1:31:17,14:17:518:14:542:-39.7935,0,-37.5702 0/1:13:2,11:2:55:11:421:-34.3281,0,-1.30833 0/1:30:10,20:10:320:20:746:-58.4267,0,-20.0745 0/0:19:18,1:18:521:1:11:0,-4.61957,-46.0593 0/0:34:34,0:34:1060:0:0:0,-10.235,-95.6691 dDocent_Contig_8262 34 . G T 219.605 . AB=0.215686;ABP=38.8183;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=223;DPB=223;DPRA=1.10377;EPP=37.7539;EPPR=443.861;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.875;PAIREDR=0.705314;PAO=0;PQA=0;PQR=0;PRO=0;QA=640;QR=8275;RO=207;RPL=0;RPP=37.7539;RPPR=452.505;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=206;SRP=443.861;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1075:0:0:0,-8.12781,-97.0363 0/0:66:61,5:61:2442:5:198:0,-1.67098,-201.728 0/1:20:16,4:16:637:4:159:-8.67084,0,-51.6444 0/1:31:24,7:24:959:7:283:-16.5114,0,-77.2798 0/0:45:45,0:45:1798:0:0:0,-13.5463,-162.031 0/0:34:34,0:34:1364:0:0:0,-10.235,-123.02 dDocent_Contig_8263 37 . T C 1734.95 . AB=0.449275;ABP=6.09442;AC=4;AF=0.333333;AN=12;AO=62;CIGAR=1X;DP=152;DPB=152;DPRA=4.92857;EPP=137.642;EPPR=196.271;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2432;QR=3373;RO=89;RPL=0;RPP=137.642;RPPR=196.271;RPR=62;RUN=1;SAF=62;SAP=137.642;SAR=0;SRF=89;SRP=196.271;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:33,3:33:1244:3:119:-0.0392501,0,-101.231 0/1:48:14,34:14:538:34:1331:-105.597,0,-34.3123 0/1:24:12,12:12:463:12:474:-35.7855,0,-34.7957 0/1:29:16,13:16:594:13:508:-37.3337,0,-45.0603 0/0:11:11,0:11:422:0:0:0,-3.31133,-38.3316 0/0:3:3,0:3:112:0:0:0,-0.90309,-10.4453 dDocent_Contig_8264 98 . N A 97.0363 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=104;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:104:-9.70309,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_8266 36 . T G 59.0483 . AB=0.125;ABP=81.1833;AC=3;AF=0.25;AN=12;AO=8;CIGAR=1X;DP=122;DPB=122;DPRA=1.10345;EPP=20.3821;EPPR=246.215;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.964286;PAO=0;PQA=0;PQR=0;PRO=0;QA=324;QR=4326;RO=112;RPL=0;RPP=20.3821;RPPR=246.215;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=112;SRP=246.215;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:5:4,1:4:163:1:41:-2.58942,0,-13.5533 0/1:18:16,2:16:617:2:82:-2.36114,0,-50.4409 0/1:41:36,5:36:1376:5:201:-6.12866,0,-111.768 0/0:26:25,0:25:971:0:0:0,-7.52575,-87.3014 0/0:17:16,0:16:617:0:0:0,-4.81648,-55.7561 0/0:15:15,0:15:582:0:0:0,-4.51545,-52.716 dDocent_Contig_8267 12 . A T 92.0594 . AB=0.117647;ABP=132.532;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=266;DPB=266;DPRA=0.955882;EPP=33.4109;EPPR=550.221;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.714286;PAIREDR=0.68254;PAO=0;PQA=0;PQR=0;PRO=0;QA=552;QR=9733;RO=252;RPL=0;RPP=33.4109;RPPR=550.221;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=252;SRP=550.221;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:26,2:26:985:2:81:0,-0.743106,-81.2713 0/0:54:54,0:54:2082:0:0:0,-16.2556,-187.6 0/1:37:33,4:33:1282:4:151:-2.81694,0,-104.52 0/1:65:57,8:57:2207:8:320:-9.59982,0,-179.267 0/0:34:34,0:34:1329:0:0:0,-10.235,-119.885 0/0:48:48,0:48:1848:0:0:0,-14.4494,-166.56 dDocent_Contig_8268 37 . G T 323.585 . AB=0.237288;ABP=38.3795;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=127;DPB=127;DPRA=4.33824;EPP=33.4109;EPPR=248.387;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=570;QR=4516;RO=113;RPL=0;RPP=33.4109;RPPR=248.387;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=113;SRP=248.387;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1069:0:0:0,-8.12781,-96.5015 0/0:2:2,0:2:70:0:0:0,-0.60206,-6.64675 0/0:10:10,0:10:391:0:0:0,-3.0103,-35.5408 0/0:5:5,0:5:203:0:0:0,-1.50515,-18.6531 0/1:59:45,14:45:1810:14:570:-33.8812,0,-145.347 0/0:24:24,0:24:973:0:0:0,-7.22472,-87.8678 dDocent_Contig_8269 12 . G A 91.0001 . AB=0.131148;ABP=75.0961;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=450;DPB=450;DPRA=0.784062;EPP=20.3821;EPPR=962.801;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993213;PAO=0;PQA=0;PQR=0;PRO=0;QA=318;QR=17149;RO=442;RPL=0;RPP=20.3821;RPPR=962.801;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=442;SRP=962.801;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:45:45,0:45:1739:0:0:0,-13.5463,-156.743 0/1:61:53,8:53:2025:8:318:-10.6229,0,-164.091 0/0:75:75,0:75:2932:0:0:0,-22.5772,-263.993 0/0:70:70,0:70:2698:0:0:0,-21.0721,-242.97 0/0:84:84,0:84:3265:0:0:0,-25.2865,-293.935 0/0:115:115,0:115:4490:0:0:0,-34.6184,-404.072 dDocent_Contig_8271 20 . T A 110.892 . AB=0.189189;ABP=34.0565;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=142;DPB=142;DPRA=2.05714;EPP=22.5536;EPPR=291.816;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.992481;PAO=0;PQA=0;PQR=0;PRO=0;QA=340;QR=4749;RO=133;RPL=0;RPP=22.5536;RPPR=291.816;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=133;SRP=291.816;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:617:0:0:0,-5.11751,-55.8596 0/0:35:33,2:33:1164:2:80:0,-2.94447,-97.4571 0/0:24:24,0:24:838:0:0:0,-7.22472,-75.7263 0/0:15:15,0:15:539:0:0:0,-4.51545,-48.8412 0/0:14:14,0:14:491:0:0:0,-4.21442,-44.5178 0/1:37:30,7:30:1100:7:260:-12.6121,0,-88.1604 dDocent_Contig_8272 107 . N T 2090.15 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=70;CIGAR=1X;DP=70;DPB=70;DPRA=0;EPP=155.013;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0.985714;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2302;QR=0;RO=0;RPL=0;RPP=155.013;RPPR=0;RPR=70;RUN=1;SAF=0;SAP=155.013;SAR=70;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:51:0,51:0:0:51:1700:-153.285,-15.3525,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:89:-8.30433,-0.90309,0 1/1:14:0,14:0:0:14:443:-40.1758,-4.21442,0 dDocent_Contig_8273 110 . A T 568.56 . AB=0.3625;ABP=16.1477;AC=5;AF=0.416667;AN=12;AO=29;CIGAR=1X;DP=99;DPB=99;DPRA=0.842105;EPP=65.983;EPPR=155.013;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=983;QR=2368;RO=70;RPL=0;RPP=65.983;RPPR=155.013;RPR=29;RUN=1;SAF=0;SAP=65.983;SAR=29;SRF=0;SRP=155.013;SRR=70;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:7:2,5:2:70:5:175:-13.9865,0,-4.54019 0/1:17:12,5:12:406:5:175:-10.9762,0,-31.7488 0/1:22:11,11:11:382:11:357:-25.8224,0,-28.0917 0/1:23:17,6:17:555:6:206:-11.9531,0,-43.337 0/1:11:9,2:9:307:2:70:-3.33607,0,-24.6504 0/0:19:19,0:19:648:0:0:0,-5.71957,-58.6407 dDocent_Contig_8274 18 . A T 601.279 . AB=0.169082;ABP=199.901;AC=2;AF=0.166667;AN=12;AO=51;CIGAR=1X;DP=1356;DPB=1356;DPRA=1.34971;EPP=113.755;EPPR=2836.78;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2013;QR=51825;RO=1305;RPL=0;RPP=113.755;RPPR=2836.78;RPR=51;RUN=1;SAF=51;SAP=113.755;SAR=0;SRF=1305;SRP=2836.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:111:89,22:89:3536:22:864:-44.6519,0,-284.865 0/0:175:175,0:175:6869:0:0:0,-52.6802,-617.97 0/1:96:83,13:83:3270:13:525:-18.6978,0,-265.473 0/0:151:141,10:141:5576:10:380:0,-10.9142,-467.135 0/0:407:405,2:405:16166:2:80:0,-114.927,-1446.07 0/0:416:412,4:412:16408:4:164:0,-110.079,-1460.28 dDocent_Contig_8275 7 . G A 7269.68 . AB=0.476744;ABP=5.43427;AC=6;AF=0.5;AN=12;AO=249;CIGAR=1X1M;DP=566;DPB=566;DPRA=0;EPP=543.707;EPPR=615.366;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.955823;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9391;QR=9244;RO=282;RPL=0;RPP=543.707;RPPR=615.366;RPR=249;RUN=1;SAF=249;SAP=543.707;SAR=0;SRF=282;SRP=615.366;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:109:86,0,18:86:2829:0,18:0,666:-28.7381,-54.6266,-283.218,0,-228.734,-223.315 0|1:151:78,0,71:78:2537:0,71:0,2669:-195.36,-218.84,-423.552,0,-204.872,-183.499 0|1:138:44,11,82:44:1445:11,82:414,3113:-242.029,-221.353,-334.772,0,-82.7869,-92.034 0|1:97:28,0,68:28:842:0,68:0,2586:-203.79,-212.219,-279.518,0,-67.3704,-46.9003 0|0:50:46,0,3:46:1591:0,3:0,87:0,-13.8474,-143.205,-6.79053,-136.286,-135.383 1|1:21:0,14,7:0:0:14,7:533,270:-66.2731,-22.5583,-18.3439,-44.0985,0,-41.9913 dDocent_Contig_8276 23 . G C 5275.99 . AB=0.211555;ABP=853.595;AC=5;AF=0.416667;AN=12;AO=261;CIGAR=1X;DP=1324;DPB=1324;DPRA=0;EPP=569.765;EPPR=2309.11;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10358;QR=42539;RO=1062;RPL=0;RPP=569.765;RPPR=2309.11;RPR=261;RUN=1;SAF=261;SAP=569.765;SAR=0;SRF=1062;SRP=2309.11;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:197:161,36:161:6452:36:1450:-71.4462,0,-521.088 0/1:323:245,78:245:9820:78:3063:-178.519,0,-785.908 0/1:241:186,55:186:7432:55:2201:-125.717,0,-595.955 0/1:236:174,62:174:6965:62:2452:-149.786,0,-555.453 0/0:147:135,12:135:5439:12:468:0,-1.78836,-446.862 0/1:180:161,18:161:6431:18:724:-11.3521,0,-524.382 dDocent_Contig_8277 12 . A G 75.2473 . AB=0.16129;ABP=33.9012;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=226;DPB=226;DPRA=0.794872;EPP=13.8677;EPPR=482.906;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.511312;PAO=0;PQA=0;PQR=0;PRO=0;QA=200;QR=8612;RO=221;RPL=0;RPP=13.8677;RPPR=482.906;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=221;SRP=482.906;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:50,0:50:1944:0:0:0,-15.0515,-175.168 0/0:33:33,0:33:1314:0:0:0,-9.93399,-118.526 0/0:38:38,0:38:1495:0:0:0,-11.4391,-134.794 0/0:50:50,0:50:1950:0:0:0,-15.0515,-175.71 0/0:24:24,0:24:917:0:0:0,-7.22472,-82.8307 0/1:31:26,5:26:992:5:200:-9.04761,0,-80.2337 dDocent_Contig_8278 108 . A G 118.567 . AB=0.5;ABP=3.0103;AC=1;AF=0.1;AN=10;AO=6;CIGAR=1X;DP=136;DPB=136;DPRA=0.387097;EPP=16.0391;EPPR=285.302;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=183;QR=4263;RO=130;RPL=0;RPP=16.0391;RPPR=285.302;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=285.302;SRR=130;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:6,6:6:204:6:183:-13.1577,0,-15.0814 0/0:14:14,0:14:475:0:0:0,-4.21442,-43.0751 0/0:10:10,0:10:310:0:0:0,-3.0103,-28.2012 0/0:85:85,0:85:2776:0:0:0,-25.5875,-250.085 ./.:.:.:.:.:.:.:. 0/0:15:15,0:15:498:0:0:0,-4.51545,-45.1386 dDocent_Contig_8279 15 . A G 9857.4 . AB=0.172176;ABP=680.701;AC=2;AF=0.166667;AN=12;AO=125;CIGAR=2M1X4M;DP=814;DPB=861.429;DPRA=0;EPP=274.444;EPPR=771.712;GTI=0;LEN=1;MEANALT=2.8;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.11022e-16;PAIRED=0.984;PAIREDR=0.991525;PAO=0;PQA=0;PQR=0;PRO=0;QA=4958;QR=13935;RO=354;RPL=0;RPP=274.444;RPPR=771.712;RPR=125;RUN=1;SAF=125;SAP=274.444;SAR=0;SRF=354;SRP=771.712;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:136:39,81,16:39:1546:81,16:3125,624:-244.85,0,-102.873,-205.307,-75.9755,-327.746 0|1:177:43,77,57:43:1670:77,57:2959,2263:-279,-49.0751,-163.109,-105.655,0,-225.715 0|1:42:3,35,4:3:120:35,4:1395,161:-117.355,-3.38655,-2.73448,-104.989,0,-113.67 0|0:196:73,78,44:73:2868:78,44:3022,1747:-226.253,0,-212.405,-104.419,-92.0776,-327.064 0|0:88:68,20,0:68:2672:20,0:743,0:-40.6908,0,-214.134,-61.1609,-220.154,-280.939 0|0:175:128,40,4:128:5059:40,4:1550,163:-88.8,0,-404.287,-113.882,-402.88,-528.995 dDocent_Contig_8280 81 . G T 446.547 . AB=0.144262;ABP=338.264;AC=1;AF=0.0833333;AN=12;AO=44;CIGAR=1X;DP=1244;DPB=1244;DPRA=1.62407;EPP=98.5551;EPPR=2606.61;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1530;QR=41044;RO=1199;RPL=44;RPP=98.5551;RPPR=2606.61;RPR=0;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=1199;SRP=2606.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:305:305,0:305:10488:0:0:0,-91.8141,-943.923 0/0:359:359,0:359:12293:0:0:0,-108.07,-1106.31 0/0:228:227,0:227:7775:0:0:0,-68.3338,-699.554 0/1:305:261,44:261:8888:44:1530:-46.1776,0,-708.163 0/0:32:32,0:32:1094:0:0:0,-9.63296,-98.7672 0/0:15:15,0:15:506:0:0:0,-4.51545,-45.8618 dDocent_Contig_8281 19 . G C 299.992 . AB=0.148936;ABP=153.951;AC=1;AF=0.0833333;AN=12;AO=56;CIGAR=1X;DP=908;DPB=908;DPRA=1.70388;EPP=124.613;EPPR=1850.93;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2147;QR=33294;RO=851;RPL=0;RPP=124.613;RPPR=1850.93;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=851;SRP=1850.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:141:120,21:120:4729:21:815:-31.2206,0,-383.111 0/0:225:211,14:211:8194:14:512:0,-21.3283,-690.697 0/0:159:152,6:152:5957:6:234:0,-26.3521,-514.549 0/0:177:162,15:162:6324:15:586:0,-0.205513,-515.892 0/0:81:81,0:81:3177:0:0:0,-24.3834,-286.027 0/0:125:125,0:125:4913:0:0:0,-37.6287,-442.092 dDocent_Contig_8282 39 . A G 724.977 . AB=0.253521;ABP=77.9414;AC=2;AF=0.166667;AN=12;AO=36;CIGAR=1X;DP=646;DPB=646;DPRA=0.563492;EPP=81.1833;EPPR=1327.61;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1309;QR=22319;RO=610;RPL=0;RPP=81.1833;RPPR=1327.61;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=610;SRP=1327.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:86:86,0:86:3153:0:0:0,-25.8886,-283.95 0/0:166:166,0:166:6052:0:0:0,-49.971,-544.687 0/0:146:146,0:146:5370:0:0:0,-43.9504,-483.336 0/0:106:106,0:106:3876:0:0:0,-31.9092,-348.985 0/1:55:29,26:29:1058:26:944:-68.7152,0,-78.9696 0/1:87:77,10:77:2810:10:365:-7.00434,0,-226.918 dDocent_Contig_8283 24 . A C 117.081 . AB=0.189189;ABP=34.0565;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=1X;DP=109;DPB=109;DPRA=1.02778;EPP=18.2106;EPPR=175.451;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.714286;PAIREDR=0.705882;PAO=0;PQA=0;PQR=0;PRO=0;QA=281;QR=4080;RO=102;RPL=0;RPP=18.2106;RPPR=224.5;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=96;SRP=175.451;SRR=6;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:19,5:19:762:5:199:-11.0627,0,-61.6775 0/0:28:28,0:28:1100:0:0:0,-8.42884,-99.288 0/0:12:12,0:12:490:0:0:0,-3.61236,-44.4511 0/1:13:11,2:11:434:2:82:-3.86629,0,-35.4967 0/0:16:16,0:16:647:0:0:0,-4.81648,-58.563 0/0:16:16,0:16:647:0:0:0,-4.81648,-58.563 dDocent_Contig_8284 138 . A T 502.38 . AB=0.182353;ABP=151.999;AC=5;AF=0.416667;AN=12;AO=32;CIGAR=1X;DP=202;DPB=202;DPRA=0;EPP=72.4974;EPPR=372.161;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.875;PAIREDR=0.758824;PAO=0;PQA=0;PQR=0;PRO=0;QA=1249;QR=6695;RO=170;RPL=0;RPP=72.4974;RPPR=372.161;RPR=32;RUN=1;SAF=0;SAP=72.4974;SAR=32;SRF=0;SRP=372.161;SRR=170;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:27:23,4:23:912:4:151:-5.82751,0,-74.2572 0/1:41:36,5:36:1429:5:196:-5.67207,0,-116.523 0/0:32:31,1:31:1231:1:40:0,-5.63728,-107.062 0/1:30:26,4:26:1024:4:154:-5.20089,0,-83.4253 0/1:28:20,8:20:767:8:304:-19.2846,0,-60.9133 0/1:44:34,10:34:1332:10:404:-23.4747,0,-106.898 dDocent_Contig_8285 18 . T A 19726 . AB=0.6149;ABP=112.293;AC=8;AF=0.666667;AN=12;AO=586;CIGAR=1X1M;DP=953;DPB=953;DPRA=0;EPP=1275.49;EPPR=489.42;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=23029;QR=8851;RO=224;RPL=0;RPP=1275.49;RPPR=489.42;RPR=586;RUN=1;SAF=586;SAP=1275.49;SAR=0;SRF=224;SRP=489.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:74:20,0,54:20:783:0,54:0,2133:-169.877,-175.897,-240.271,0,-64.7657,-48.5101 1|1:70:5,8,56:5:202:8,56:322,2209:-190.158,-165.123,-179.369,-9.9019,0,-9.71036 0|1:85:28,0,57:28:1095:0,57:0,2248:-176.907,-185.336,-275.349,0,-90.4043,-73.2456 0|1:161:39,0,122:39:1537:0,122:0,4770:-380.762,-392.502,-518.945,0,-126.836,-90.1101 0|1:198:59,15,123:59:2359:15,123:606,4836:-379.974,-347.774,-537.57,0,-144.354,-157.288 1|1:365:73,118,174:73:2875:118,174:4652,6833:-686.149,-325.409,-526.384,-146.219,0,-330.336 dDocent_Contig_8286 98 . N C 1290.8 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=41;CIGAR=2X;DP=41;DPB=41;DPRA=0;EPP=92.0407;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=33.0242;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1431;QR=0;RO=0;RPL=41;RPP=92.0407;RPPR=0;RPR=0;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:41:0,41:0:0:41:1431:-129.08,-12.3422,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_8287 1 . N G 74.9833 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=79;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:79:-7.49724,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_8288 36 . C T 961.468 . AB=0.116631;ABP=1185.13;AC=2;AF=0.166667;AN=12;AO=136;CIGAR=1X;DP=2021;DPB=2021;DPRA=1.48917;EPP=298.331;EPPR=4096.24;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.992573;PAO=0;PQA=0;PQR=0;PRO=0;QA=5311;QR=74951;RO=1885;RPL=0;RPP=298.331;RPPR=4096.24;RPR=136;RUN=1;SAF=136;SAP=298.331;SAR=0;SRF=1885;SRP=4096.24;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:197:187,10:187:7401:10:398:0,-23.1234,-629.574 0/0:298:298,0:298:11891:0:0:0,-89.7069,-1069.38 0/0:210:210,0:210:8374:0:0:0,-63.2163,-753.201 0/0:390:372,18:372:14810:18:716:0,-52.635,-1267.02 0/1:509:451,58:451:17929:58:2245:-49.0017,0,-1458.98 0/1:417:367,50:367:14546:50:1952:-50.367,0,-1182.54 dDocent_Contig_8289 38 . C T 1253.27 . AB=0.441065;ABP=10.9448;AC=3;AF=0.25;AN=12;AO=117;CIGAR=1X1M1X;DP=481;DPB=481;DPRA=1.15862;EPP=257.073;EPPR=76.7147;GTI=0;LEN=1;MEANALT=1;MQM=21.188;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.597796;PAO=0;PQA=0;PQR=0;PRO=0;QA=3967;QR=13115;RO=363;RPL=0;RPP=257.073;RPPR=791.255;RPR=117;RUN=1;SAF=0;SAP=257.073;SAR=117;SRF=126;SRP=76.7147;SRR=237;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:60:59,0:59:2135:0:0:0,-17.7608,-192.098 0|1:87:62,25:62:2236:25:821:-17.1849,0,-175.285 0|1:40:23,17:23:832:17:572:-22.2761,0,-63.1553 0|1:136:62,74:62:2245:74:2539:-91.0877,0,-161.345 0|0:85:85,0:85:3072:0:0:0,-25.5875,-276.674 0|0:73:72,1:72:2595:1:35:0,-19.9886,-231.785 dDocent_Contig_8290 15 . A T 414.177 . AB=0.363636;ABP=10.1169;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=147;DPB=147;DPRA=0.854369;EPP=37.7539;EPPR=287.473;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0.580153;PAO=0;PQA=0;PQR=0;PRO=0;QA=635;QR=5185;RO=131;RPL=0;RPP=37.7539;RPPR=287.473;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=131;SRP=287.473;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:751:0:0:0,-5.71957,-67.9123 0/0:29:29,0:29:1154:0:0:0,-8.72987,-104.141 0/0:26:26,0:26:1027:0:0:0,-7.82678,-92.7166 0/0:29:29,0:29:1132:0:0:0,-8.72987,-102.17 0/1:21:11,10:11:441:10:391:-29.2245,0,-33.7228 0/1:23:17,6:17:680:6:244:-15.4151,0,-54.6051 dDocent_Contig_8292 8 . A G 2711.96 . AB=0.32304;ABP=117.521;AC=6;AF=0.5;AN=12;AO=136;CIGAR=1X;DP=421;DPB=421;DPRA=0;EPP=298.331;EPPR=619.708;GTI=0;LEN=1;MEANALT=1.16667;MQM=52.5809;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.919014;PAO=0;PQA=0;PQR=0;PRO=0;QA=4544;QR=9796;RO=284;RPL=0;RPP=298.331;RPPR=619.708;RPR=136;RUN=1;SAF=136;SAP=298.331;SAR=0;SRF=284;SRP=619.708;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:74:59,15:59:2081:15:500:-22.845,0,-165.252 0/1:25:11,14:11:357:14:453:-33.4673,0,-24.9089 0/1:116:70,45:70:2440:45:1489:-98.9275,0,-184.81 0/1:86:59,27:59:2033:27:935:-58.2944,0,-157.319 0/1:67:47,20:47:1627:20:692:-41.8832,0,-126.525 0/1:53:38,15:38:1258:15:475:-27.0002,0,-97.5366 dDocent_Contig_8294 10 . C T 131.913 . AB=0.26087;ABP=14.4341;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X2M1X1M1X;DP=199;DPB=199;DPRA=0.653409;EPP=16.0391;EPPR=404.733;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.994595;PAO=0;PQA=0;PQR=0;PRO=0;QA=233;QR=6522;RO=185;RPL=0;RPP=16.0391;RPPR=404.733;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=185;SRP=404.733;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:23:16,6,0:16:559:6,0:233,0:-14.4132,0,-43.7126,-19.2296,-45.5188,-64.6754 0|0:57:54,0,1:54:1911:0,1:0,11:0,-16.2556,-171.945,-15.6599,-171.26,-170.959 0|0:13:13,0,0:13:463:0,0:0,0:0,-3.91339,-41.9969,-3.91339,-41.9969,-41.9969 0|0:37:37,0,0:37:1268:0,0:0,0:0,-11.1381,-114.395,-11.1381,-114.395,-114.395 0|0:34:32,0,1:32:1137:0,1:0,11:0,-9.63296,-102.501,-8.93899,-101.82,-101.518 0|0:35:33,0,2:33:1184:0,2:0,36:0,-9.93399,-106.662,-7.11618,-104.034,-103.432 dDocent_Contig_8295 107 . N T 94.2431 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=101;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:101:-9.42377,-0.90309,0 ./.:.:.:.:.:.:.:. dDocent_Contig_8296 59 . C A 4016.85 . AB=0.457227;ABP=8.39735;AC=4;AF=0.333333;AN=12;AO=159;CIGAR=1X;DP=512;DPB=512;DPRA=0.937778;EPP=348.274;EPPR=767.369;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5806;QR=13215;RO=352;RPL=159;RPP=348.274;RPPR=767.369;RPR=0;RUN=1;SAF=159;SAP=348.274;SAR=0;SRF=352;SRP=767.369;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:77:17,60:17:592:60:2198:-174.859,0,-30.4119 0/1:73:36,37:36:1337:37:1350:-99.8038,0,-98.6292 0/1:124:75,48:75:2865:48:1750:-120.346,0,-220.589 0/1:65:55,10:55:2053:10:368:-13.8979,0,-165.414 0/0:83:79,4:79:3028:4:140:0,-12.0463,-259.734 0/0:90:90,0:90:3340:0:0:0,-27.0927,-300.72 dDocent_Contig_8297 60 . C G 1123.13 . AB=0.213166;ABP=230.974;AC=5;AF=0.416667;AN=12;AO=75;CIGAR=2M1X3M;DP=415;DPB=414.5;DPRA=0;EPP=165.871;EPPR=691.367;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.48;PAIREDR=0.687697;PAO=0;PQA=0;PQR=0;PRO=0;QA=2585;QR=10925;RO=317;RPL=34;RPP=4.429;RPPR=28.4994;RPR=41;RUN=1;SAF=34;SAP=4.429;SAR=41;SRF=128;SRP=28.4994;SRR=189;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:54:32,2,3,17:32:1108:2,3,17:67,99,572:-36.7164,-40.9233,-130.377,-38.3469,-122.976,-127.499,0,-84.6358,-82.0593,-84.9438 0|1:83:54,10,0,19:54:1854:10,0,19:318,0,650:-36.5195,-27.1816,-174.715,-52.7752,-177.726,-203.325,0,-124.967,-150.565,-144.845 0|1:37:28,2,0,6:28:973:2,0,6:63,0,212:-8.91647,-12.2786,-90.8111,-17.3453,-91.4132,-96.478,0,-74.1452,-79.2099,-77.4037 0|1:57:44,3,0,10:44:1552:3,0,10:103,0,345:-14.7828,-19.6648,-145.14,-28.0281,-146.044,-154.407,0,-118.018,-126.381,-123.371 0|0:96:87,0,0,7:87:2984:0,0,7:0,0,242:0,-26.1896,-268.484,-26.1896,-268.484,-268.484,-6.42393,-248.82,-248.82,-246.712 0|1:88:72,0,0,16:72:2454:0,0,16:0,0,564:-24.6001,-46.2743,-245.366,-46.2743,-245.366,-245.366,0,-199.442,-199.442,-194.626 dDocent_Contig_8298 39 . T A 2927.26 . AB=0.436735;ABP=11.5278;AC=4;AF=0.333333;AN=12;AO=109;CIGAR=2X;DP=329;DPB=329;DPRA=1.2;EPP=239.701;EPPR=480.734;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4220;QR=8605;RO=220;RPL=0;RPP=239.701;RPPR=480.734;RPR=109;RUN=1;SAF=109;SAP=239.701;SAR=0;SRF=220;SRP=480.734;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:78:68,10:68:2661:10:390:-11.9774,0,-216.16 0|0:37:35,2:35:1374:2:81:0,-3.45238,-116.244 0|1:70:27,43:27:1074:43:1674:-129.82,0,-75.8823 0|0:47:47,0:47:1823:0:0:0,-14.1484,-164.3 0|1:47:22,25:22:852:25:967:-73.1888,0,-62.8481 0|1:50:21,29:21:821:29:1108:-84.9615,0,-59.1585 dDocent_Contig_8299 17 . G A 425.815 . AB=0.15544;ABP=202.032;AC=3;AF=0.25;AN=12;AO=30;CIGAR=1X;DP=311;DPB=311;DPRA=1.63559;EPP=68.1545;EPPR=585.244;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.766667;PAIREDR=0.642857;PAO=0;PQA=0;PQR=0;PRO=0;QA=1165;QR=11030;RO=280;RPL=0;RPP=68.1545;RPPR=611.023;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=277;SRP=585.244;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:54,0:54:2134:0:0:0,-16.2556,-192.25 0/1:62:47,15:47:1839:15:595:-35.2238,0,-147.064 0/1:63:55,8:55:2187:8:309:-9.20557,0,-178.041 0/1:68:61,7:61:2407:7:261:-3.37091,0,-196.322 0/0:26:26,0:26:1027:0:0:0,-7.82678,-92.7266 0/0:38:37,0:37:1436:0:0:0,-11.1381,-129.096 dDocent_Contig_8301 183 . T C 714.489 . AB=0.4;ABP=8.65613;AC=1;AF=0.0833333;AN=12;AO=27;CIGAR=1X;DP=260;DPB=260;DPRA=0.988506;EPP=61.6401;EPPR=508.963;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1066;QR=9184;RO=233;RPL=27;RPP=61.6401;RPPR=508.963;RPR=0;RUN=1;SAF=0;SAP=61.6401;SAR=27;SRF=0;SRP=508.963;SRR=233;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:352:0:0:0,-2.70927,-32.0364 0/0:21:20,1:20:789:1:41:0,-2.22706,-67.2307 0/0:36:36,0:36:1398:0:0:0,-10.8371,-126.072 0/0:48:48,0:48:1920:0:0:0,-14.4494,-172.996 0/0:81:81,0:81:3171:0:0:0,-24.3834,-285.469 0/1:65:39,26:39:1554:26:1025:-72.9717,0,-120.536 dDocent_Contig_8302 7 . G A 3232.57 . AB=0.275605;ABP=237.873;AC=6;AF=0.5;AN=12;AO=148;CIGAR=1X;DP=537;DPB=537;DPRA=0;EPP=324.388;EPPR=815.141;GTI=0;LEN=1;MEANALT=2.33333;MQM=47.4392;MQMR=59.992;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5632;QR=11761;RO=374;RPL=0;RPP=324.388;RPPR=815.141;RPR=148;RUN=1;SAF=148;SAP=324.388;SAR=0;SRF=374;SRP=815.141;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:100:46,52:46:1399:52:1992:-138.307,0,-96.5421 0/1:102:74,23:74:2456:23:869:-47.5504,0,-191.924 0/1:73:49,21:49:1562:21:780:-48.5797,0,-119.582 0/1:87:66,20:66:2072:20:759:-41.498,0,-160.705 0/1:73:56,16:56:1743:16:618:-33.6751,0,-135.258 0/1:102:83,16:83:2529:16:614:-24.8683,0,-197.804 dDocent_Contig_8303 63 . C A 31.5981 . AB=0.113208;ABP=71.8828;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=334;DPB=334;DPRA=0.94306;EPP=16.0391;EPPR=715.253;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990854;PAO=0;PQA=0;PQR=0;PRO=0;QA=222;QR=12889;RO=328;RPL=6;RPP=16.0391;RPPR=715.253;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=328;SRP=715.253;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:53:47,6:47:1850:6:222:-4.38136,0,-150.759 0/0:86:86,0:86:3358:0:0:0,-25.8886,-302.295 0/0:53:53,0:53:2097:0:0:0,-15.9546,-188.917 0/0:84:84,0:84:3268:0:0:0,-25.2865,-294.194 0/0:10:10,0:10:401:0:0:0,-3.0103,-36.449 0/0:48:48,0:48:1915:0:0:0,-14.4494,-172.55 dDocent_Contig_8304 23 . T G 1329.94 . AB=0.440367;ABP=6.37708;AC=4;AF=0.333333;AN=12;AO=50;CIGAR=1X;DP=159;DPB=159;DPRA=1.125;EPP=111.584;EPPR=239.701;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.4;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1985;QR=4375;RO=109;RPL=0;RPP=111.584;RPPR=239.701;RPR=50;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=109;SRP=239.701;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:15,17:15:609:17:676:-51.5356,0,-45.5146 0/0:26:24,2:24:971:2:78:0,-0.424003,-80.2859 0/1:43:23,20:23:909:20:788:-58.2907,0,-69.1718 0/1:22:14,8:14:560:8:324:-22.9067,0,-44.1207 0/0:24:24,0:24:961:0:0:0,-7.22472,-86.7922 0/1:12:9,3:9:365:3:119:-7.48265,0,-29.6021 dDocent_Contig_8305 1 . N G 164.571 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=8.07091;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=179;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:179:-16.4569,-1.50515,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_8306 7 . C T 478.54 . AB=0.253012;ABP=46.9892;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=1X7M;DP=605;DPB=634.375;DPRA=1.24074;EPP=57.2971;EPPR=1216.86;GTI=0;LEN=1;MEANALT=4.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.971377;PAO=0;PQA=0;PQR=0;PRO=0;QA=955;QR=21848;RO=559;RPL=0;RPP=57.2971;RPPR=1216.86;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=559;SRP=1216.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:83:58,21:58:2249:21:810:-49.0758,0,-178.462 0|0:59:49,3:49:1886:3:106:0,-6.09656,-160.126 0|0:74:70,0:70:2754:0:0:0,-21.0721,-247.629 0|0:51:48,0:48:1892:0:0:0,-14.4494,-170.236 0|0:145:144,0:144:5625:0:0:0,-43.3483,-505.764 0|0:193:190,1:190:7442:1:39:0,-53.9465,-665.719 dDocent_Contig_8307 31 . G T 7387.23 . AB=0.159851;ABP=273.347;AC=1;AF=0.0833333;AN=12;AO=43;CIGAR=1X1M1X;DP=539;DPB=539;DPRA=0;EPP=96.3836;EPPR=528.507;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1694;QR=9446;RO=242;RPL=0;RPP=96.3836;RPPR=528.507;RPR=43;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=242;SRP=528.507;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:36:15,11,10:15:590:11,10:437,395:-31.4628,0,-45.2198,-3.477,-16.0281,-48.9965 0|0:155:64,27,63:64:2475:27,63:1063,2500:-186.525,-118.346,-313.479,0,-115.816,-184.299 0|0:77:51,0,26:51:2024:0,26:0,1036:-70.3516,-85.7041,-252.32,0,-167.013,-159.186 0|0:78:19,5,53:19:761:5,53:194,2095:-166.708,-156.488,-217.679,0,-46.7887,-46.7736 0|0:96:49,0,47:49:1876:0,47:0,1882:-140.684,-155.435,-309.345,0,-154.302,-140.154 0|0:97:44,0,52:44:1720:0,52:0,2037:-154.213,-167.459,-308.853,0,-141.376,-125.722 dDocent_Contig_8308 21 . C T 282.956 . AB=0.176471;ABP=80.2892;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X1M;DP=294;DPB=294;DPRA=0.704918;EPP=46.4397;EPPR=582.793;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=0.65;PAIREDR=0.820225;PAO=0;PQA=0;PQR=0;PRO=0;QA=806;QR=10545;RO=267;RPL=0;RPP=46.4397;RPPR=582.793;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=267;SRP=582.793;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:36:34,0,2:34:1358:0,2:0,82:0,-10.235,-122.074,-3.0574,-115.305,-114.703 0|0:51:47,1,3:47:1808:1,3:41,123:0,-10.7643,-158.834,-3.99617,-148.981,-151.462 0|1:37:32,2,3:32:1277:2,3:79,122:-0.437224,-3.57422,-108.13,0,-98.6686,-104.266 0|1:48:32,3,12:32:1264:3,12:118,479:-29.8165,-29.745,-132.845,0,-94.3007,-100.394 0|0:63:63,0,0:63:2470:0,0:0,0:0,-18.9649,-222.443,-18.9649,-222.443,-222.443 0|0:59:59,0,0:59:2368:0,0:0,0:0,-17.7608,-213.27,-17.7608,-213.27,-213.27 dDocent_Contig_8309 107 . N T 2823.65 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=100;CIGAR=1X;DP=100;DPB=100;DPRA=0;EPP=220.158;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3128;QR=0;RO=0;RPL=0;RPP=220.158;RPPR=0;RPR=100;RUN=1;SAF=0;SAP=220.158;SAR=100;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:57:0,57:0:0:57:1774:-159.927,-17.1587,0 1/1:43:0,43:0:0:43:1354:-122.137,-12.9443,0 dDocent_Contig_8310 128 . T C 194.522 . AB=0.409091;ABP=4.58955;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=96;DPB=96;DPRA=1.76471;EPP=26.8965;EPPR=187.585;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.905882;PAO=0;PQA=0;PQR=0;PRO=0;QA=368;QR=2830;RO=85;RPL=0;RPP=26.8965;RPPR=187.585;RPR=11;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=187.585;SRR=85;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:521:0:0:0,-4.81648,-47.2004 0/1:22:13,9:13:420:9:303:-20.9749,0,-31.4892 0/0:23:21,2:21:713:2:65:0,-0.750404,-58.3137 0/0:16:16,0:16:539:0:0:0,-4.81648,-48.8306 0/0:4:4,0:4:139:0:0:0,-1.20412,-12.8527 0/0:15:15,0:15:498:0:0:0,-4.51545,-45.1366 dDocent_Contig_8311 13 . C T 39.941 . AB=0.125;ABP=42.0968;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=194;DPB=194;DPRA=0.987654;EPP=11.6962;EPPR=415.59;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=164;QR=7565;RO=190;RPL=0;RPP=11.6962;RPPR=415.59;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=190;SRP=415.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:627:0:0:0,-4.81648,-56.7574 0/0:45:45,0:45:1784:0:0:0,-13.5463,-160.777 0/0:20:20,0:20:807:0:0:0,-6.0206,-72.9447 0/0:27:27,0:27:1091:0:0:0,-8.12781,-98.4723 0/0:54:54,0:54:2139:0:0:0,-16.2556,-192.679 0/1:32:28,4:28:1117:4:164:-5.51694,0,-91.1782 dDocent_Contig_8312 18 . T G 53983 . AB=0.118931;ABP=2314.99;AC=1;AF=0.0833333;AN=12;AO=223;CIGAR=1X3M2X1M1X;DP=3475;DPB=3477.88;DPRA=0;EPP=487.249;EPPR=2465.46;GTI=0;LEN=1;MEANALT=7.75;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8538;QR=43902;RO=1134;RPL=0;RPP=487.249;RPPR=2465.46;RPR=223;RUN=1;SAF=223;SAP=487.249;SAR=0;SRF=1134;SRP=2465.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:698:123,128,91,349:123:4752:128,91,349:4868,3578,13530:-1083.35,-721.148,-1072.89,-826.071,-817.115,-1188.95,-8.9539,0,-104.921,-294.166 0|0:644:33,5,45,553:33:1255:5,45,553:197,1748,21583:-1827.66,-1821.38,-1922.8,-1693.97,-1780.68,-1783.34,-63.5518,-150.262,-22.8452,0 0|0:476:86,32,44,311:86:3344:32,44,311:1235,1746,12177:-975.258,-899.725,-1164.88,-857.422,-1030.79,-1118.97,0,-173.37,-131.064,-181.171 0|0:659:179,58,54,366:179:6927:58,54,366:2238,2144,14315:-1122.95,-993.049,-1544.57,-1000.33,-1385.53,-1553.06,0,-385.2,-392.48,-458.805 0|0:539:367,0,34,112:367:14199:0,34,112:0,1350,4355:-247.355,-357.833,-1524.11,-246.699,-1412.97,-1402.74,0,-1166.27,-1055.14,-1132.55 0|0:459:346,0,79,25:346:13425:0,79,25:0,3102,956:-150.962,-255.119,-1358.1,0,-1102.99,-1079.21,-176.694,-1279.68,-1024.56,-1272.15 dDocent_Contig_8313 8 . T A 13339.3 . AB=0.862475;ABP=583.894;AC=2;AF=0.166667;AN=12;AO=440;CIGAR=1X;DP=1253;DPB=1253;DPRA=1.14555;EPP=958.458;EPPR=1768.42;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997727;PAIREDR=0.99016;PAO=0;PQA=0;PQR=0;PRO=0;QA=16603;QR=31059;RO=813;RPL=0;RPP=958.458;RPPR=1768.42;RPR=440;RUN=1;SAF=440;SAP=958.458;SAR=0;SRF=813;SRP=1768.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:170:170,0:170:6462:0:0:0,-51.1751,-581.494 0/0:296:296,0:296:11305:0:0:0,-89.1049,-1017.02 0/0:118:118,0:118:4503:0:0:0,-35.5215,-405.327 0/0:160:159,1:159:6094:1:39:0,-44.2682,-544.496 0/1:328:50,278:50:1923:278:10463:-842.596,0,-74.5756 0/1:181:20,161:20:772:161:6101:-494.558,0,-15.3209 dDocent_Contig_8314 31 . G T 107.637 . AB=0.133333;ABP=90.593;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=411;DPB=411;DPRA=0.446429;EPP=24.725;EPPR=871.599;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.3575;PAO=0;PQA=0;PQR=0;PRO=0;QA=396;QR=15826;RO=400;RPL=0;RPP=24.725;RPPR=871.599;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=400;SRP=871.599;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:35,6:35:1371:6:235:-9.04458,0,-111.209 0/1:33:29,4:29:1129:4:161:-4.94091,0,-91.9494 0/0:28:28,0:28:1111:0:0:0,-8.42884,-100.269 0/0:41:41,0:41:1644:0:0:0,-12.3422,-148.187 0/0:150:150,0:150:5944:0:0:0,-45.1545,-534.753 0/0:117:117,0:117:4627:0:0:0,-35.2205,-416.356 dDocent_Contig_8316 9 . T A 41.6457 . AB=0.137931;ABP=36.0317;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=194;DPB=194;DPRA=0.878788;EPP=11.6962;EPPR=415.59;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9421;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.552632;PAO=0;PQA=0;PQR=0;PRO=0;QA=156;QR=7268;RO=190;RPL=0;RPP=11.6962;RPPR=415.59;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=190;SRP=415.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1129:0:0:0,-9.0309,-101.906 0/0:26:26,0:26:992:0:0:0,-7.82678,-89.5895 0/0:32:32,0:32:1221:0:0:0,-9.63296,-110.183 0/0:48:48,0:48:1850:0:0:0,-14.4494,-166.745 0/1:29:25,4:25:963:4:156:-5.68742,0,-78.2543 0/0:29:29,0:29:1113:0:0:0,-8.72987,-100.439 dDocent_Contig_8317 26 . C A 178.948 . AB=0.121795;ABP=196.828;AC=1;AF=0.0833333;AN=12;AO=59;CIGAR=1X;DP=863;DPB=863;DPRA=0;EPP=131.127;EPPR=1746.7;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.983051;PAIREDR=0.935243;PAO=0;PQA=0;PQR=0;PRO=0;QA=2281;QR=31685;RO=803;RPL=0;RPP=131.127;RPPR=1746.7;RPR=59;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=803;SRP=1746.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:111:106,5:106:4095:5:201:0,-14.9434,-350.076 0/1:156:136,19:136:5308:19:735:-19.4176,0,-430.552 0/0:99:90,9:90:3556:9:317:0,-0.948661,-291.227 0/0:141:132,9:132:5271:9:362:0,-9.50154,-441.304 0/0:218:207,11:207:8202:11:441:0,-25.5788,-697.71 0/0:138:132,6:132:5253:6:225:0,-20.9362,-452.036 dDocent_Contig_8318 40 . G A 1670.32 . AB=0.105263;ABP=28.7251;AC=0;AF=0;AN=12;AO=2;CIGAR=1X3M1X1M;DP=116;DPB=116;DPRA=2.11111;EPP=7.35324;EPPR=113.755;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=78;QR=1977;RO=51;RPL=0;RPP=7.35324;RPPR=113.755;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=51;SRP=113.755;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:4:1,0,0,3:1:40:0,0,3:0,0,122:-10.1684,-10.4694,-13.7628,-10.4694,-13.7628,-13.7628,0,-3.69465,-3.69465,-2.79156 0|0:19:11,2,0,6:11:424:2,0,6:78,0,234:-15.9198,-12.8195,-47.0248,-19.2311,-47.6269,-54.0388,0,-28.3941,-34.8064,-33.0002 0|0:9:9,0,0,0:9:348:0,0,0:0,0,0:0,-2.70927,-31.6789,-2.70927,-31.6789,-31.6789,-2.70927,-31.6789,-31.6789,-31.6789 0|0:28:10,0,0,18:10:384:0,0,18:0,0,721:-56.7877,-59.798,-91.3104,-59.798,-91.3104,-91.3104,0,-31.9019,-31.9019,-26.4834 0|0:33:8,0,4,20:8:312:0,4,20:0,161,801:-63.6014,-66.0096,-91.6548,-52.7389,-78.3843,-77.1802,0,-25.6563,-12.3787,-19.6357 0|0:23:12,0,0,11:12:469:0,0,11:0,0,404:-29.7652,-33.3775,-71.9487,-33.3775,-71.9487,-71.9487,0,-38.9493,-38.9493,-35.638 dDocent_Contig_8319 38 . G A 79.3259 . AB=0.120879;ABP=116.619;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=321;DPB=321;DPRA=0.899408;EPP=35.5824;EPPR=665.309;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.4;PAIREDR=0.445902;PAO=0;PQA=0;PQR=0;PRO=0;QA=571;QR=12105;RO=305;RPL=0;RPP=35.5824;RPPR=665.309;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=305;SRP=665.309;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:61:57,4:57:2265:4:153:0,-4.22212,-189.874 0/1:58:50,8:50:1956:8:295:-9.4351,0,-158.775 0/1:33:29,3:29:1159:3:123:-1.45959,0,-94.5965 0/0:55:55,0:55:2174:0:0:0,-16.5566,-195.839 0/0:43:43,0:43:1722:0:0:0,-12.9443,-155.2 0/0:71:71,0:71:2829:0:0:0,-21.3731,-254.715 dDocent_Contig_8320 1 . N G 64.585 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=68;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:68:-6.45742,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_8321 19 . G T 23986.7 . AB=0.541877;ABP=18.1054;AC=10;AF=0.833334;AN=12;AO=543;CIGAR=3M2X;DP=1066;DPB=1688.8;DPRA=0;EPP=1182.12;EPPR=380.846;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.11022e-16;PAIRED=0.979742;PAIREDR=0.994253;PAO=0;PQA=0;PQR=0;PRO=0;QA=21596;QR=6921;RO=174;RPL=0;RPP=1182.12;RPPR=380.846;RPR=543;RUN=1;SAF=543;SAP=1182.12;SAR=0;SRF=174;SRP=380.846;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:268:45,56,166:45:1775:56,166:2178,6582:-561.023,-395.724,-524.898,-32.8094,0,-128.874 1|1:264:29,104,128:29:1158:104,128:4078,5100:-651.061,-324.581,-388.645,-239.836,0,-296.677 0|1:131:23,17,90:23:917:17,90:657,3609:-290.425,-243.44,-313.835,0,-21.6129,-48.4263 0|1:243:70,33,140:70:2787:33,140:1301,5563:-436.894,-350.977,-570.526,0,-122.496,-187.341 1|1:75:0,69,6:0:0:69,6:2729,236:-245.233,-20.7711,0,-225.821,-0.966091,-224.015 1|1:85:7,64,13:7:284:64,13:2519,506:-223.254,-18.144,-22.3049,-183.782,0,-203.291 dDocent_Contig_8322 15 . T G 6387.35 . AB=0.414798;ABP=31.1323;AC=4;AF=0.333333;AN=12;AO=185;CIGAR=1X1M1X;DP=511;DPB=511;DPRA=4.84783;EPP=404.733;EPPR=504.62;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6935;QR=9171;RO=231;RPL=0;RPP=404.733;RPPR=504.62;RPR=185;RUN=1;SAF=185;SAP=404.733;SAR=0;SRF=231;SRP=504.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:133:60,57,15:60:2368:57,15:2145,561:-157.699,0,-177.689,-129.829,-148.92,-320.15 0|1:109:56,35,16:56:2227:35,16:1306,615:-90.0609,0,-172.826,-56.4274,-132.876,-234.977 0|1:113:41,64,8:41:1624:64,8:2405,315:-184.671,0,-114.396,-171.096,-107.748,-302.356 0|1:91:55,29,7:55:2189:29,7:1079,270:-71.7491,0,-171.511,-66.1306,-158.069,-244.27 0|0:23:0,0,23:0:0:0,23:0,862:-77.8933,-77.8933,-77.8933,-6.92369,-6.92369,0 0|0:42:19,0,23:19:763:0,23:0,869:-65.8836,-71.6032,-134.483,0,-63.2705,-56.3469 dDocent_Contig_8323 41 . T C 338.189 . AB=0.179487;ABP=107.408;AC=3;AF=0.25;AN=12;AO=22;CIGAR=1X2M1X;DP=235;DPB=235;DPRA=0.736842;EPP=50.7827;EPPR=461.191;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.727273;PAIREDR=0.78673;PAO=0;PQA=0;PQR=0;PRO=0;QA=851;QR=8197;RO=211;RPL=0;RPP=50.7827;RPPR=461.191;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=211;SRP=461.191;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:35:25,10:25:967:10:385:-24.4634,0,-76.8032 0|1:42:37,5:37:1438:5:197:-5.46314,0,-117.046 0|0:23:22,1:22:851:1:38:0,-3.12642,-73.1059 0|1:40:34,6:34:1331:6:231:-9.11418,0,-108.028 0|0:44:42,0:42:1623:0:0:0,-12.6433,-145.915 0|0:51:51,0:51:1987:0:0:0,-15.3525,-179.046 dDocent_Contig_8324 7 . C T 1809.74 . AB=0.259615;ABP=159.607;AC=3;AF=0.25;AN=12;AO=93;CIGAR=1X;DP=502;DPB=502;DPRA=5.9359;EPP=204.957;EPPR=886.8;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990172;PAO=0;PQA=0;PQR=0;PRO=0;QA=3567;QR=15681;RO=407;RPL=0;RPP=204.957;RPPR=886.8;RPR=93;RUN=1;SAF=93;SAP=204.957;SAR=0;SRF=407;SRP=886.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:95:64,30:64:2484:30:1144:-74.8553,0,-195.355 0/1:132:109,23:109:4194:23:881:-39.8725,0,-337.797 0/0:151:139,12:139:5347:12:467:0,-3.07317,-438.835 0/1:85:57,28:57:2195:28:1075:-71.4685,0,-172.182 0/0:10:10,0:10:385:0:0:0,-3.0103,-35.0068 0/0:29:28,0:28:1076:0:0:0,-8.42884,-96.9672 dDocent_Contig_8325 10 . T C 63.4412 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=413;DPB=413;DPRA=0.795181;EPP=3.0103;EPPR=830.691;GTI=0;LEN=1;MEANALT=1;MQM=32;MQMR=59.9345;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.989924;PAO=0;PQA=0;PQR=0;PRO=0;QA=595;QR=15970;RO=397;RPL=0;RPP=37.7539;RPPR=865.085;RPR=16;RUN=1;SAF=8;SAP=3.0103;SAR=8;SRF=393;SRP=830.691;SRR=4;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:33,2:33:1335:2:76:0,-4.64435,-114.516 0/0:83:83,0:83:3339:0:0:0,-24.9855,-300.533 0/0:84:80,4:80:3209:4:141:0,-14.17,-277.752 0/0:81:75,6:75:3022:6:227:0,-7.34528,-255.02 0/0:128:126,2:126:5065:2:76:0,-32.6401,-449.818 1/1:2:0,2:0:0:2:75:-5.86682,-0.60206,0 dDocent_Contig_8326 7 . C T 602.197 . AB=0.458333;ABP=3.73412;AC=1;AF=0.0833333;AN=12;AO=29;CIGAR=1X;DP=448;DPB=448;DPRA=1.13287;EPP=65.983;EPPR=912.857;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.892601;PAO=0;PQA=0;PQR=0;PRO=0;QA=1109;QR=16147;RO=419;RPL=0;RPP=65.983;RPPR=912.857;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=419;SRP=912.857;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:87:87,0:87:3361:0:0:0,-26.1896,-302.624 0/0:138:138,0:138:5306:0:0:0,-41.5421,-477.534 0/1:48:26,22:26:989:22:843:-61.7426,0,-74.867 0/0:114:107,7:107:4150:7:266:0,-10.0156,-349.267 0/0:10:10,0:10:387:0:0:0,-3.0103,-35.1875 0/0:51:51,0:51:1954:0:0:0,-15.3525,-176.102 dDocent_Contig_8327 26 . A T 99.5789 . AB=0.0842105;ABP=145.665;AC=0;AF=0;AN=12;AO=8;CIGAR=1X3M3X3M1X2M1I2M1X3M;DP=218;DPB=218.421;DPRA=1.46907;EPP=20.3821;EPPR=365.646;GTI=0;LEN=1;MEANALT=5;MQM=6;MQMR=60;NS=6;NUMALT=6;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=48;QR=6513;RO=167;RPL=0;RPP=20.3821;RPPR=365.646;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=167;SRP=365.646;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:35:20,1,0,2,3,5,4:20:782:1,0,2,3,5,4:40,0,12,63,187,161:-8.51721,-12.8694,-76.9192,-14.5378,-77.2202,-78.8894,-14.5346,-77.1987,-78.8671,-78.265,-10.6043,-73.2776,-74.946,-74.9265,-74.0429,0,-62.7182,-64.3869,-64.3677,-60.4461,-62.8817,-1.22474,-63.9438,-65.6128,-65.5925,-61.6707,-51.1085,-64.4087 0|0:60:36,12,0,6,2,2,0:36:1394:12,0,6,2,2,0:469,0,36,36,79,0:-4.65721,0,-111.06,-15.4943,-114.673,-130.132,-15.4172,-114.592,-130.039,-128.233,-13.3925,-112.577,-128.034,-127.942,-127.432,-9.20578,-108.401,-123.86,-123.767,-121.761,-123.258,-15.4943,-114.673,-130.132,-130.039,-128.034,-123.86,-130.132 0|0:64:59,0,0,0,0,5,0:59:2302:0,0,0,0,5,0:0,0,0,0,195,0:0,-17.7608,-206.993,-17.7608,-206.993,-206.993,-17.7608,-206.993,-206.993,-206.993,-17.7608,-206.993,-206.993,-206.993,-206.993,-1.89612,-191.507,-191.507,-191.507,-191.507,-190.001,-17.7608,-206.993,-206.993,-206.993,-206.993,-191.507,-206.993 0|0:26:22,0,2,0,2,0,0:22:867:0,2,0,2,0,0:0,80,0,42,0,0:-0.0772517,-6.69991,-78.1155,0,-71.5235,-70.9214,-6.69991,-78.1155,-71.5235,-78.1155,-4.17046,-75.4927,-68.9021,-75.4927,-74.8907,-6.69991,-78.1155,-71.5235,-78.1155,-75.4927,-78.1155,-6.69991,-78.1155,-71.5235,-78.1155,-75.4927,-78.1155,-78.1155 0|0:14:12,1,0,0,0,0,0:12:469:1,0,0,0,0,0:38,0,0,0,0,0:0,-2.02839,-40.2866,-3.61236,-40.5876,-42.2447,-3.61236,-40.5876,-42.2447,-42.2447,-3.61236,-40.5876,-42.2447,-42.2447,-42.2447,-3.61236,-40.5876,-42.2447,-42.2447,-42.2447,-42.2447,-3.61236,-40.5876,-42.2447,-42.2447,-42.2447,-42.2447,-42.2447 0|0:19:18,1,0,0,0,0,0:18:699:1,0,0,0,0,0:38,0,0,0,0,0:0,-3.53028,-61.0466,-5.41854,-61.3476,-63.0081,-5.41854,-61.3476,-63.0081,-63.0081,-5.41854,-61.3476,-63.0081,-63.0081,-63.0081,-5.41854,-61.3476,-63.0081,-63.0081,-63.0081,-63.0081,-5.41854,-61.3476,-63.0081,-63.0081,-63.0081,-63.0081,-63.0081 dDocent_Contig_8328 28 . G A 309.182 . AB=0.307692;ABP=15.538;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=345;DPB=345;DPRA=0.637255;EPP=29.068;EPPR=726.111;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.984985;PAO=0;PQA=0;PQR=0;PRO=0;QA=487;QR=13289;RO=333;RPL=0;RPP=29.068;RPPR=726.111;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=333;SRP=726.111;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1405:0:0:0,-10.536,-126.706 0/0:50:50,0:50:1972:0:0:0,-15.0515,-177.673 0/1:39:27,12:27:1090:12:487:-32.4411,0,-86.6452 0/0:46:46,0:46:1856:0:0:0,-13.8474,-167.239 0/0:78:78,0:78:3122:0:0:0,-23.4803,-281.055 0/0:97:97,0:97:3844:0:0:0,-29.1999,-345.957 dDocent_Contig_8329 18 . T A 180.431 . AB=0.132743;ABP=135.393;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=334;DPB=334;DPRA=0.897727;EPP=39.9253;EPPR=691.367;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.529412;PAIREDR=0.55205;PAO=0;PQA=0;PQR=0;PRO=0;QA=687;QR=12631;RO=317;RPL=0;RPP=39.9253;RPPR=691.367;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=317;SRP=691.367;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:45:45,0:45:1781:0:0:0,-13.5463,-160.501 0/0:87:87,0:87:3459:0:0:0,-26.1896,-311.347 0/0:44:44,0:44:1770:0:0:0,-13.2453,-159.514 0/0:45:43,2:43:1679:2:81:0,-5.86062,-143.637 0/1:48:42,6:42:1697:6:242:-7.70751,0,-138.498 0/1:65:56,9:56:2245:9:364:-13.5574,0,-182.649 dDocent_Contig_8330 58 . T C 801.298 . AB=0.219512;ABP=143.097;AC=3;AF=0.25;AN=12;AO=56;CIGAR=1X;DP=427;DPB=427;DPRA=0;EPP=124.613;EPPR=808.627;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.571429;PAIREDR=0.555256;PAO=0;PQA=0;PQR=0;PRO=0;QA=2020;QR=13572;RO=371;RPL=31;RPP=4.40625;RPPR=39.539;RPR=25;RUN=1;SAF=31;SAP=4.40625;SAR=25;SRF=225;SRP=39.539;SRR=146;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:56:55,1:55:1962:1:34:0,-13.4588,-173.45 0/1:57:46,11:46:1633:11:394:-18.6415,0,-130.096 0/0:63:59,4:59:2194:4:148:0,-5.28378,-184.017 0/0:103:97,6:97:3614:6:215:0,-11.3085,-305.713 0/1:45:26,19:26:941:19:668:-46.8882,0,-71.4545 0/1:103:88,15:88:3228:15:561:-19.8219,0,-259.694 dDocent_Contig_8332 26 . C A 484.813 . AB=0.164773;ABP=174.803;AC=3;AF=0.25;AN=12;AO=37;CIGAR=1X;DP=357;DPB=357;DPRA=0;EPP=83.3548;EPPR=697.881;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.9875;PAO=0;PQA=0;PQR=0;PRO=0;QA=1469;QR=12753;RO=320;RPL=0;RPP=83.3548;RPPR=697.881;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=320;SRP=697.881;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:63:54,9:54:2151:9:359:-13.7073,0,-174.807 0/0:87:84,3:84:3332:3:118:0,-15.188,-288.929 0/0:28:26,2:26:1042:2:81:0,-0.743106,-86.386 0/0:66:63,3:63:2510:3:110:0,-9.61074,-215.783 0/1:54:39,15:39:1554:15:599:-37.9912,0,-123.835 0/1:59:54,5:54:2164:5:202:-0.8011,0,-177.173 dDocent_Contig_8333 209 . N G 77.8076 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_8335 36 . G A 1582.53 . AB=0.385621;ABP=20.3963;AC=5;AF=0.416667;AN=12;AO=59;CIGAR=1X;DP=216;DPB=216;DPRA=0.485714;EPP=131.127;EPPR=343.931;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2353;QR=6159;RO=157;RPL=0;RPP=131.127;RPPR=343.931;RPR=59;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=157;SRP=343.931;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:23,7:23:927:7:282:-16.7217,0,-74.7024 0/1:32:19,13:19:740:13:508:-36.4336,0,-57.282 0/1:26:19,7:19:735:7:280:-17.7448,0,-58.641 0/1:46:19,27:19:740:27:1082:-83.8231,0,-53.0675 0/0:63:63,0:63:2504:0:0:0,-18.9649,-225.502 0/1:19:14,5:14:513:5:201:-12.7513,0,-40.7729 dDocent_Contig_8336 91 . C T 840.667 . AB=0.342105;ABP=27.6965;AC=2;AF=0.166667;AN=12;AO=39;CIGAR=1X;DP=316;DPB=316;DPRA=1.12871;EPP=87.6977;EPPR=604.508;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.472924;PAO=0;PQA=0;PQR=0;PRO=0;QA=1344;QR=9485;RO=277;RPL=39;RPP=87.6977;RPPR=604.508;RPR=0;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=277;SRP=604.508;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:986:0:0:0,-8.72987,-89.0495 0/0:58:58,0:58:1966:0:0:0,-17.4597,-177.216 0/0:45:45,0:45:1564:0:0:0,-13.5463,-141.054 0/0:70:70,0:70:2378:0:0:0,-21.0721,-214.282 0/1:62:38,24:38:1314:24:825:-55.9037,0,-99.8978 0/1:52:37,15:37:1277:15:519:-31.3848,0,-99.5794 dDocent_Contig_8337 40 . C T 262.879 . AB=0.213333;ABP=56.5443;AC=4;AF=0.333333;AN=12;AO=16;CIGAR=1X;DP=101;DPB=101;DPRA=1.44231;EPP=37.7539;EPPR=187.585;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.623529;PAO=0;PQA=0;PQR=0;PRO=0;QA=598;QR=3386;RO=85;RPL=0;RPP=37.7539;RPPR=187.585;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=85;SRP=187.585;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:480:0:0:0,-3.61236,-43.551 0/1:21:17,4:17:689:4:151:-7.6315,0,-56.0173 0/0:14:14,0:14:564:0:0:0,-4.21442,-51.1022 0/1:20:18,2:18:701:2:76:-1.19294,0,-57.395 0/1:20:14,6:14:556:6:211:-13.2986,0,-44.3612 0/1:14:10,4:10:396:4:160:-10.5685,0,-31.7828 dDocent_Contig_8338 62 . C T 72.367 . AB=0.114583;ABP=126.875;AC=2;AF=0.166667;AN=12;AO=21;CIGAR=1X;DP=332;DPB=332;DPRA=1.10196;EPP=48.6112;EPPR=678.338;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.380952;PAIREDR=0.360129;PAO=0;PQA=0;PQR=0;PRO=0;QA=821;QR=12359;RO=311;RPL=21;RPP=48.6112;RPPR=678.338;RPR=0;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=311;SRP=678.338;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:51,3:51:2019:3:118:0,-5.25342,-170.901 0/0:83:78,5:78:3055:5:202:0,-6.42341,-256.485 0/1:44:38,6:38:1527:6:240:-8.73013,0,-124.424 0/1:52:47,5:47:1871:5:188:-1.62434,0,-152.944 0/0:51:51,0:51:2047:0:0:0,-15.3525,-184.406 0/0:48:46,2:46:1840:2:73:0,-7.51814,-158.878 dDocent_Contig_8339 15 . C T 1779.03 . AB=0.327014;ABP=57.8528;AC=4;AF=0.333333;AN=12;AO=69;CIGAR=1X;DP=238;DPB=238;DPRA=3.90741;EPP=152.842;EPPR=367.818;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2747;QR=6741;RO=168;RPL=0;RPP=152.842;RPPR=367.818;RPR=69;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=168;SRP=367.818;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:47:31,15:31:1250:15:604:-40.6569,0,-98.7323 0/1:50:44,6:44:1756:6:241:-7.0148,0,-143.207 0/1:47:28,19:28:1134:19:741:-52.8559,0,-88.1897 0/1:67:38,29:38:1525:29:1161:-84.5973,0,-117.317 0/0:13:13,0:13:523:0:0:0,-3.91339,-47.4126 0/0:14:14,0:14:553:0:0:0,-4.21442,-50.1104 dDocent_Contig_8340 98 . N C 289.085 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=9;CIGAR=1M3I3M6I1M10X;DP=10;DPB=17.4;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1.25;MQM=36.4444;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=4.5;PQA=142.5;PQR=3.5;PRO=0.5;QA=348;QR=0;RO=0;RPL=0;RPP=22.5536;RPPR=0;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:2:0,2:0:0:2:75:-6.72338,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:74:-4.51063,-0.60206,0 1|1:3:0,3:0:0:3:120:-10.3572,-0.90309,0 1|1:3:0,2:0:0:2:79:-6.61757,-0.60206,0 dDocent_Contig_8342 13 . T A 861.776 . AB=0.164134;ABP=325.372;AC=5;AF=0.416667;AN=12;AO=55;CIGAR=1X;DP=372;DPB=372;DPRA=0;EPP=122.441;EPPR=689.196;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.85443;PAO=0;PQA=0;PQR=0;PRO=0;QA=2182;QR=11780;RO=316;RPL=0;RPP=122.441;RPPR=689.196;RPR=55;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=316;SRP=689.196;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:75:62,13:62:2300:13:507:-23.394,0,-184.64 0/1:48:38,10:38:1417:10:404:-22.2701,0,-113.355 0/1:37:32,5:32:1168:5:197:-6.9668,0,-94.2653 0/1:75:58,17:58:2197:17:678:-38.7724,0,-175.365 0/0:43:42,1:42:1591:1:41:0,-8.84972,-139.358 0/1:94:84,9:84:3107:9:355:-3.99542,0,-251.486 dDocent_Contig_8343 17 . A G 61984.8 . AB=0.726128;ABP=426.279;AC=10;AF=0.833333;AN=12;AO=1916;CIGAR=1X4M;DP=2412;DPB=2412;DPRA=0;EPP=4163.55;EPPR=441.648;GTI=0;LEN=1;MEANALT=6;MQM=59.9749;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.999478;PAIREDR=0.99505;PAO=0;PQA=0;PQR=0;PRO=0;QA=74620;QR=7808;RO=202;RPL=0;RPP=4163.55;RPPR=441.648;RPR=1916;RUN=1;SAF=1916;SAP=4163.55;SAR=0;SRF=202;SRP=441.648;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:395:30,18,322:30:1171:18,322:696,12452:-1014.25,-966.117,-1056.95,-0.672744,-39.7708,0 1|1:402:12,27,331:12:442:27,331:1061,12835:-1113.99,-1030.34,-1058.34,-63.5112,-12.3679,0 1|1:277:12,6,246:12:458:6,246:237,9572:-819.4,-803.509,-839.274,-36.4831,-54.5478,0 1|1:385:21,20,325:21:823:20,325:787,12707:-1068.3,-1009.89,-1071.54,-30.1599,-33.0931,0 0|1:453:68,33,322:68:2602:33,322:1309,12584:-1013.98,-926.699,-1130.26,0,-105.736,-116.561 0|1:500:59,47,370:59:2312:47,370:1847,14470:-1171.78,-1037.63,-1213.59,0,-38.1924,-78.731 dDocent_Contig_8344 22 . A G 1709.15 . AB=0.200935;ABP=335.509;AC=5;AF=0.416667;AN=12;AO=90;CIGAR=1X;DP=545;DPB=545;DPRA=0;EPP=198.443;EPPR=991.03;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=56.411;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.905495;PAO=0;PQA=0;PQR=0;PRO=0;QA=3571;QR=18215;RO=455;RPL=0;RPP=198.443;RPPR=991.03;RPR=90;RUN=1;SAF=90;SAP=198.443;SAR=0;SRF=455;SRP=991.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:50:44,6:44:1719:6:244:-7.28733,0,-139.873 0/0:117:113,4:113:4542:4:164:0,-20.0706,-370.013 0/1:57:52,5:52:2081:5:201:-1.31181,0,-170.286 0/1:125:103,22:103:4139:22:853:-39.4479,0,-321.953 0/1:91:61,30:61:2434:30:1206:-81.4191,0,-184.251 0/1:105:82,23:82:3300:23:903:-49.9674,0,-241.419 dDocent_Contig_8345 26 . G A 350.43 . AB=0.48;ABP=3.09716;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=172;DPB=172;DPRA=0.85034;EPP=29.068;EPPR=350.446;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99375;PAO=0;PQA=0;PQR=0;PRO=0;QA=486;QR=6216;RO=160;RPL=0;RPP=29.068;RPPR=350.446;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=160;SRP=350.446;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:948:0:0:0,-7.52575,-85.6186 0/0:36:36,0:36:1394:0:0:0,-10.8371,-125.714 0/0:37:37,0:37:1468:0:0:0,-11.1381,-132.366 0/0:38:38,0:38:1486:0:0:0,-11.4391,-133.996 0/0:11:11,0:11:438:0:0:0,-3.31133,-39.7745 0/1:25:13,12:13:482:12:486:-36.5659,0,-36.181 dDocent_Contig_8346 7 . C A 80.5567 . AB=0.171429;ABP=35.8306;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=144;DPB=144;DPRA=0.642202;EPP=16.0391;EPPR=302.673;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.963768;PAO=0;PQA=0;PQR=0;PRO=0;QA=224;QR=5286;RO=138;RPL=0;RPP=16.0391;RPPR=302.673;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=138;SRP=302.673;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:10:9,1:9:341:1:38:-0.786969,0,-28.0358 0/0:16:16,0:16:615:0:0:0,-4.81648,-55.6887 0/0:67:67,0:67:2567:0:0:0,-20.169,-231.228 0/0:9:9,0:9:347:0:0:0,-2.70927,-31.5897 0/1:25:20,5:20:771:5:186:-9.57414,0,-62.1924 0/0:17:17,0:17:645:0:0:0,-5.11751,-58.3839 dDocent_Contig_8347 12 . T G 1641.73 . AB=0.110714;ABP=371.571;AC=6;AF=0.5;AN=12;AO=31;CIGAR=1X6M;DP=306;DPB=306;DPRA=0;EPP=70.3259;EPPR=378.675;GTI=0;LEN=1;MEANALT=3.6;MQM=60;MQMR=57.896;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.930636;PAO=0;PQA=0;PQR=0;PRO=0;QA=1244;QR=6599;RO=173;RPL=0;RPP=70.3259;RPPR=378.675;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=173;SRP=378.675;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:38:24,1,3,3,5:24:888:1,3,3,5:41,113,117,205:-9.70266,-13.5497,-85.8683,-7.67403,-76.9106,-79.3851,-7.35075,-76.5895,-70.7085,-79.0641,0,-69.2441,-63.3629,-63.0417,-71.1168 0|1:64:37,15,4,0,8:37:1422:15,4,0,8:600,155,0,315:-29.8072,0,-112.21,-28.2073,-103.992,-143.751,-40.9453,-116.725,-144.955,-157.689,-15.0226,-90.8147,-119.043,-131.777,-129.369 0|1:26:17,3,2,3,0:17:649:3,2,3,0:121,78,103,0:-4.85577,0,-52.3684,-3.55473,-46.8583,-56.215,-2.77238,-46.0493,-49.5947,-55.1035,-9.97328,-53.2715,-56.817,-56.0066,-63.2298 0|1:80:60,12,2,1,5:60:2305:12,2,1,5:479,77,40,198:-10.9086,0,-174.694,-22.6431,-171.984,-200.397,-25.6874,-175.026,-197.718,-203.74,-12.6549,-162.008,-184.7,-187.742,-189.517 0|1:53:13,35,0,0,5:13:492:35,0,0,5:1389,0,0,204:-95.1965,0,-24.2562,-99.1099,-34.7922,-133.951,-99.1099,-34.7922,-133.951,-133.951,-82.2711,-17.9397,-117.114,-117.114,-115.609 0|1:45:22,14,0,0,8:22:843:14,0,0,8:545,0,0,322:-24.924,0,-62.0698,-31.5467,-66.2842,-97.8738,-31.5467,-66.2842,-97.8738,-97.8738,-4.97061,-39.7379,-71.3243,-71.3243,-68.916 dDocent_Contig_8348 36 . G A 251.935 . AB=0.178571;ABP=78.3914;AC=4;AF=0.333333;AN=12;AO=17;CIGAR=1X;DP=126;DPB=126;DPRA=1.9;EPP=39.9253;EPPR=237.529;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.796296;PAO=0;PQA=0;PQR=0;PRO=0;QA=671;QR=4298;RO=108;RPL=0;RPP=39.9253;RPPR=237.529;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=108;SRP=237.529;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:23,2:23:915:2:81:-0.159984,0,-75.1304 0/0:30:27,2:27:1078:2:81:0,-1.3856,-89.6511 0/1:20:17,3:17:662:3:119:-5.07441,0,-53.8816 0/1:11:10,1:10:389:1:41:-0.783237,0,-32.0519 0/0:12:12,0:12:484:0:0:0,-3.61236,-43.9105 0/1:28:19,9:19:770:9:349:-23.3354,0,-61.1914 dDocent_Contig_8349 7 . C A 2427.55 . AB=0.478947;ABP=3.74174;AC=6;AF=0.5;AN=12;AO=91;CIGAR=1X;DP=190;DPB=190;DPRA=0;EPP=200.614;EPPR=215.815;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.956044;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3433;QR=3751;RO=98;RPL=0;RPP=200.614;RPPR=215.815;RPR=91;RUN=1;SAF=91;SAP=200.614;SAR=0;SRF=98;SRP=215.815;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:15,13:15:572:13:501:-37.0096,0,-43.3918 0/1:32:18,14:18:691:14:523:-37.7766,0,-52.8909 0/1:29:21,8:21:797:8:296:-18.2612,0,-63.3229 0/1:28:14,14:14:535:14:525:-39.1592,0,-40.0656 0/1:53:23,30:23:887:30:1131:-86.1329,0,-64.1945 0/1:20:7,12:7:269:12:457:-35.6375,0,-18.7191 dDocent_Contig_8350 14 . A C 2310.52 . AB=0.782609;ABP=50.8771;AC=3;AF=0.25;AN=12;AO=70;CIGAR=1X;DP=368;DPB=368;DPRA=0.600707;EPP=155.013;EPPR=650.109;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2806;QR=11870;RO=298;RPL=0;RPP=155.013;RPPR=650.109;RPR=70;RUN=1;SAF=70;SAP=155.013;SAR=0;SRF=298;SRP=650.109;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:52:52,0:52:2056:0:0:0,-15.6536,-185.212 0/0:102:102,0:102:4080:0:0:0,-30.7051,-367.171 0/0:53:53,0:53:2105:0:0:0,-15.9546,-189.635 0/0:76:76,0:76:3024:0:0:0,-22.8783,-272.239 1/1:16:0,16:0:0:16:649:-58.7428,-4.81648,0 0/1:69:15,54:15:605:54:2157:-173.531,0,-34.0175 dDocent_Contig_8351 12 . T G 155.417 . AB=0.205128;ABP=32.4644;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=296;DPB=296;DPRA=1.08451;EPP=37.7539;EPPR=611.023;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.5625;PAIREDR=0.657143;PAO=0;PQA=0;PQR=0;PRO=0;QA=638;QR=11207;RO=280;RPL=0;RPP=37.7539;RPPR=611.023;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=280;SRP=611.023;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:67:67,0:67:2702:0:0:0,-20.169,-243.293 0/0:61:57,4:57:2285:4:158:0,-3.76293,-191.208 0/1:39:31,8:31:1239:8:316:-17.0645,0,-100.04 0/0:54:50,4:50:1993:4:164:0,-1.10572,-164.412 0/0:38:38,0:38:1519:0:0:0,-11.4391,-136.95 0/0:37:37,0:37:1469:0:0:0,-11.1381,-132.457 dDocent_Contig_8352 9 . T G 370.95 . AB=0;ABP=0;AC=3;AF=0.25;AN=12;AO=3;CIGAR=1X7M1X2M1X3M1X;DP=296;DPB=296;DPRA=0.764706;EPP=9.52472;EPPR=517.649;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.388186;PAO=0;PQA=0;PQR=0;PRO=0;QA=116;QR=9294;RO=237;RPL=0;RPP=9.52472;RPPR=517.649;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=237;SRP=517.649;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:30:23,7,0,0:23:906:7,0,0:147,0,0:-2.49357,0,-72.8237,-9.41726,-74.9309,-84.1183,-9.41726,-74.9309,-84.1183,-84.1183 0|0:57:54,3,0,0:54:2094:3,0,0:63,0,0:0,-12.1168,-183.635,-16.2556,-184.538,-188.486,-16.2556,-184.538,-188.486,-188.486 0|0:39:33,0,1,3:33:1296:0,1,3:0,36,116:0,-9.93399,-116.563,-6.99456,-113.626,-113.325,-0.369167,-107.035,-104.098,-106.132 0|1:84:60,16,6,0:60:2372:16,6,0:335,233,0:-2.86607,0,-190.45,-1.72847,-176.121,-195.296,-20.9279,-195.267,-197.102,-216.251 0|1:41:25,0,16,0:25:986:0,16,0:0,562,0:-36.9238,-44.4495,-125.609,0,-81.5205,-76.7041,-44.4495,-125.609,-81.5205,-125.609 0|0:45:42,0,0,0:42:1640:0,0,0:0,0,0:0,-12.6433,-147.59,-12.6433,-147.59,-147.59,-12.6433,-147.59,-147.59,-147.59 dDocent_Contig_8353 57 . A T 4433.4 . AB=0.106122;ABP=333.154;AC=1;AF=0.0833333;AN=12;AO=26;CIGAR=2X;DP=478;DPB=478;DPRA=0;EPP=59.4686;EPPR=593.651;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1030;QR=10168;RO=272;RPL=26;RPP=59.4686;RPPR=593.651;RPR=0;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=272;SRP=593.651;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:49:42,5,2:42:1518:5,2:200,67:-3.87782,0,-122.417,-11.115,-118.499,-134.376 0|0:77:61,7,9:61:2280:7,9:283,355:-10.8403,-5.86632,-190.435,0,-163.331,-183.957 0|0:45:25,9,11:25:944:9,11:365,416:-26.55,-3.96271,-78.624,0,-47.2424,-74.0392 0|0:74:46,5,23:46:1746:5,23:182,916:-61.6061,-60.5991,-202.248,0,-128.321,-136.256 0|0:131:53,0,76:53:2050:0,76:0,2659:-200.519,-216.474,-384.875,0,-168.593,-145.715 0|0:102:45,0,57:45:1630:0,57:0,2018:-151.167,-164.714,-297.768,0,-133.413,-116.254 dDocent_Contig_8354 98 . N T 59.3584 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=60;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,2:0:0:2:53:-4.89203,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_8355 8 . T C 657.532 . AB=0.184466;ABP=181.155;AC=3;AF=0.25;AN=12;AO=41;CIGAR=1X;DP=401;DPB=401;DPRA=0.869333;EPP=92.0407;EPPR=784.74;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.853659;PAIREDR=0.833333;PAO=0;PQA=0;PQR=0;PRO=0;QA=1582;QR=13833;RO=360;RPL=0;RPP=92.0407;RPPR=784.74;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=360;SRP=784.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:34,2:34:1302:2:77:0,-3.52794,-110.161 0/1:80:69,11:69:2644:11:428:-14.793,0,-214.068 0/0:75:75,0:75:2894:0:0:0,-22.5772,-260.629 0/1:67:53,14:53:2043:14:532:-28.0535,0,-163.932 0/0:84:83,1:83:3187:1:39:0,-21.39,-283.083 0/1:59:46,13:46:1763:13:506:-28.1286,0,-141.164 dDocent_Contig_8356 10 . C G 14150.3 . AB=0.401633;ABP=105.966;AC=6;AF=0.5;AN=12;AO=492;CIGAR=1X2M;DP=1225;DPB=1225;DPRA=0;EPP=1071.37;EPPR=1208.18;GTI=0;LEN=1;MEANALT=3.5;MQM=57.2358;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.922523;PAO=0;PQA=0;PQR=0;PRO=0;QA=19433;QR=22064;RO=555;RPL=0;RPP=1071.37;RPPR=1208.18;RPR=492;RUN=1;SAF=492;SAP=1071.37;SAR=0;SRF=555;SRP=1208.18;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:210:96,28,4,82:96:3783:28,4,82:1113,145,3260:-238.435,-175.792,-478.569,-255.611,-475.274,-565.612,0,-219.665,-299.484,-286.523 0|1:130:58,14,11,47:58:2289:14,11,47:565,434,1827:-132.468,-109.589,-293.706,-114.45,-262.444,-299.474,0,-148.006,-152.868,-174.196 0|1:135:38,35,11,50:38:1519:35,11,50:1390,443,1971:-150.368,-47.4569,-162.041,-125.535,-136.306,-247.343,0,-10.7713,-88.8487,-110.069 0|1:190:93,13,16,68:93:3708:13,16,68:524,647,2683:-190.169,-175.003,-476.443,-165.119,-427.312,-465.656,0,-262.186,-252.303,-284.877 0|1:292:133,11,10,136:133:5311:11,10,136:439,404,5399:-404.145,-408.081,-842.186,-411.035,-812.351,-845.441,0,-401.331,-404.285,-396.491 0|1:268:137,0,20,109:137:5454:0,20,109:0,800,4293:-310.671,-351.912,-800.992,-286.136,-735.216,-729.196,0,-449.076,-383.301,-416.264 dDocent_Contig_8357 114 . T A 45.4513 . AB=0.666667;ABP=3.73412;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=57;DPB=57;DPRA=0.85;EPP=9.52472;EPPR=120.27;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=105;QR=1822;RO=54;RPL=0;RPP=9.52472;RPPR=120.27;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=120.27;SRR=54;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:3:1,2:1:34:2:70:-5.74431,0,-2.49582 0/0:7:7,0:7:243:0:0:0,-2.10721,-22.2088 0/0:16:16,0:16:543:0:0:0,-4.81648,-49.192 0/0:14:13,1:13:440:1:35:0,-0.715791,-36.4266 0/0:6:6,0:6:193:0:0:0,-1.80618,-17.6858 0/0:11:11,0:11:369:0:0:0,-3.31133,-33.5343 dDocent_Contig_8358 13 . C G 1004.45 . AB=0.342342;ABP=26.9747;AC=2;AF=0.166667;AN=12;AO=41;CIGAR=1X;DP=335;DPB=335;DPRA=1.16129;EPP=92.0407;EPPR=641.423;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0487805;PAIREDR=0.636054;PAO=0;PQA=0;PQR=0;PRO=0;QA=1630;QR=11834;RO=294;RPL=0;RPP=92.0407;RPPR=641.423;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=294;SRP=641.423;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:65:48,17:48:1950:17:686:-42.5017,0,-156.121 0/0:69:66,3:66:2623:3:114:0,-10.1398,-225.558 0/1:46:25,21:25:994:21:830:-61.1656,0,-75.9074 0/0:60:60,0:60:2428:0:0:0,-18.0618,-218.659 0/0:37:37,0:37:1498:0:0:0,-11.1381,-135.059 0/0:58:58,0:58:2341:0:0:0,-17.4597,-210.841 dDocent_Contig_8359 78 . C A 630.915 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=21;CIGAR=1X;DP=130;DPB=130;DPRA=1.01852;EPP=48.6112;EPPR=239.701;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=731;QR=3748;RO=109;RPL=21;RPP=48.6112;RPPR=239.701;RPR=0;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=109;SRP=239.701;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:657:0:0:0,-5.71957,-59.4538 0/0:10:10,0:10:349:0:0:0,-3.0103,-31.7468 0/0:23:23,0:23:788:0:0:0,-6.92369,-71.2363 0/0:48:48,0:48:1649:0:0:0,-14.4494,-148.7 1/1:22:1,21:1:35:21:731:-62.6144,-3.12403,0 0/0:8:8,0:8:270:0:0:0,-2.40824,-24.6288 dDocent_Contig_8360 31 . A T 2468.7 . AB=0.309816;ABP=105.429;AC=6;AF=0.5;AN=12;AO=101;CIGAR=1X;DP=326;DPB=326;DPRA=0;EPP=222.329;EPPR=491.592;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.762376;PAIREDR=0.813333;PAO=0;PQA=0;PQR=0;PRO=0;QA=3937;QR=8933;RO=225;RPL=0;RPP=222.329;RPPR=491.592;RPR=101;RUN=1;SAF=101;SAP=222.329;SAR=0;SRF=225;SRP=491.592;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:51:45,6:45:1767:6:213:-4.14859,0,-143.894 0/1:60:46,14:46:1850:14:548:-31.596,0,-148.645 0/1:55:48,7:48:1919:7:287:-9.64858,0,-156.352 0/1:59:41,18:41:1633:18:657:-41.6704,0,-129.437 0/1:50:18,32:18:717:32:1264:-98.964,0,-49.803 0/1:51:27,24:27:1047:24:968:-72.0641,0,-79.1683 dDocent_Contig_8361 52 . A G 1409.57 . AB=0.315217;ABP=57.5803;AC=5;AF=0.416667;AN=12;AO=60;CIGAR=1X;DP=217;DPB=217;DPRA=0;EPP=133.299;EPPR=343.931;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.566667;PAIREDR=0.44586;PAO=0;PQA=0;PQR=0;PRO=0;QA=2343;QR=6150;RO=157;RPL=60;RPP=133.299;RPPR=343.931;RPR=0;RUN=1;SAF=60;SAP=133.299;SAR=0;SRF=157;SRP=343.931;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:15,8:15:581:8:318:-22.0608,0,-45.7006 0/1:48:28,20:28:1115:20:794:-57.3312,0,-86.1883 0/1:37:21,16:21:820:16:635:-46.3476,0,-62.981 0/1:34:28,6:28:1084:6:242:-11.9225,0,-87.6148 0/0:33:31,2:31:1191:2:78:0,-2.53069,-100.055 0/1:42:34,8:34:1359:8:276:-12.5164,0,-109.928 dDocent_Contig_8362 69 . G A 263.031 . AB=0.220339;ABP=43.0905;AC=3;AF=0.25;AN=12;AO=13;CIGAR=1X;DP=112;DPB=112;DPRA=1.11321;EPP=31.2394;EPPR=217.986;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=517;QR=3849;RO=99;RPL=13;RPP=31.2394;RPPR=217.986;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=99;SRP=217.986;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:20,4:20:780:4:156:-7.19023,0,-63.2901 0/1:12:11,1:11:430:1:40:-0.383319,0,-35.4377 0/1:23:15,8:15:589:8:321:-22.3326,0,-46.4206 0/0:27:27,0:27:1019:0:0:0,-8.12781,-91.9995 0/0:1:1,0:1:40:0:0:0,-0.30103,-3.99568 0/0:25:25,0:25:991:0:0:0,-7.52575,-89.4886 dDocent_Contig_8363 11 . A C 1926.06 . AB=0.315126;ABP=73.6653;AC=4;AF=0.333333;AN=12;AO=76;CIGAR=1X;DP=414;DPB=414;DPRA=0.785714;EPP=168.042;EPPR=736.968;GTI=0;LEN=1;MEANALT=1;MQM=59.3421;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.960526;PAIREDR=0.997041;PAO=0;PQA=0;PQR=0;PRO=0;QA=3057;QR=13500;RO=338;RPL=0;RPP=168.042;RPPR=736.968;RPR=76;RUN=1;SAF=76;SAP=168.042;SAR=0;SRF=338;SRP=736.968;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:53:44,9:44:1762:9:368:-17.5308,0,-142.841 0/1:72:39,33:39:1556:33:1312:-96.6673,0,-118.606 0/1:30:17,13:17:682:13:525:-37.3099,0,-52.679 0/1:83:63,20:63:2517:20:811:-48.3194,0,-201.684 0/0:84:84,0:84:3362:0:0:0,-25.2865,-302.63 0/0:92:91,1:91:3621:1:41:0,-23.6002,-321.823 dDocent_Contig_8364 118 . A G 37.9257 . AB=0.140625;ABP=74.8046;AC=3;AF=0.25;AN=12;AO=10;CIGAR=1X;DP=174;DPB=174;DPRA=0.859375;EPP=24.725;EPPR=359.132;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.7;PAIREDR=0.841463;PAO=0;PQA=0;PQR=0;PRO=0;QA=317;QR=5011;RO=164;RPL=0;RPP=24.725;RPPR=359.132;RPR=10;RUN=1;SAF=0;SAP=24.725;SAR=10;SRF=0;SRP=359.132;SRR=164;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:11:10,1:10:315:1:34:-0.0875811,0,-25.3466 0/1:36:31,5:31:984:5:145:-2.49839,0,-78.0182 0/1:17:14,3:14:416:3:103:-4.49251,0,-32.6135 0/0:46:45,1:45:1341:1:35:0,-10.3487,-117.465 0/0:27:27,0:27:842:0:0:0,-8.12781,-76.0743 0/0:37:37,0:37:1113:0:0:0,-11.1381,-100.447 dDocent_Contig_8365 10 . A G 54.0778 . AB=0.148148;ABP=32.0437;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=187;DPB=187;DPRA=0.571429;EPP=16.0391;EPPR=396.047;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.333333;PAIREDR=0.839779;PAO=0;PQA=0;PQR=0;PRO=0;QA=244;QR=7273;RO=181;RPL=0;RPP=16.0391;RPPR=396.047;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=181;SRP=396.047;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:22,1:22:883:1:40:0,-2.92801,-75.7839 0/0:45:45,0:45:1805:0:0:0,-13.5463,-162.657 0/0:18:17,1:17:690:1:41:0,-1.32397,-58.3341 0/1:27:23,4:23:934:4:163:-6.93062,0,-76.232 0/0:25:25,0:25:1001:0:0:0,-7.52575,-90.3867 0/0:49:49,0:49:1960:0:0:0,-14.7505,-176.596 dDocent_Contig_8366 131 . C T 102.207 . AB=0.25;ABP=16.0391;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=96;DPB=96;DPRA=1.66667;EPP=16.0391;EPPR=198.443;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=207;QR=3275;RO=90;RPL=0;RPP=16.0391;RPPR=198.443;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=198.443;SRR=90;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:551:0:0:0,-4.51545,-49.9293 0/0:25:25,0:25:917:0:0:0,-7.52575,-82.8407 0/0:7:7,0:7:262:0:0:0,-2.10721,-23.9362 0/0:5:5,0:5:184:0:0:0,-1.50515,-16.9184 0/0:20:20,0:20:725:0:0:0,-6.0206,-65.5764 0/1:24:18,6:18:636:6:207:-11.7435,0,-50.3403 dDocent_Contig_8367 98 . N G 1444.42 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=47;CIGAR=1X;DP=47;DPB=47;DPRA=0;EPP=105.07;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1583;QR=0;RO=0;RPL=47;RPP=105.07;RPPR=0;RPR=0;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:68:-6.45788,-0.60206,0 1/1:40:0,40:0:0:40:1357:-122.426,-12.0412,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:3:0,3:0:0:3:88:-8.21121,-0.90309,0 ./.:.:.:.:.:.:.:. dDocent_Contig_8368 8 . T C 35.1029 . AB=0.121951;ABP=53.9075;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=166;DPB=166;DPRA=1.64;EPP=13.8677;EPPR=352.617;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.89441;PAO=0;PQA=0;PQR=0;PRO=0;QA=189;QR=6217;RO=161;RPL=0;RPP=13.8677;RPPR=352.617;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=161;SRP=352.617;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:737:0:0:0,-5.71957,-66.6611 0/0:25:25,0:25:965:0:0:0,-7.52575,-87.1635 0/0:26:26,0:26:1013:0:0:0,-7.82678,-91.4795 0/0:30:30,0:30:1152:0:0:0,-9.0309,-103.98 0/0:25:25,0:25:959:0:0:0,-7.52575,-86.6237 0/1:41:36,5:36:1391:5:189:-5.03303,0,-113.13 dDocent_Contig_8369 7 . C T 3786.57 . AB=0.31068;ABP=163.341;AC=6;AF=0.5;AN=12;AO=160;CIGAR=1X;DP=515;DPB=515;DPRA=0;EPP=350.446;EPPR=773.883;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.69375;PAIREDR=0.797183;PAO=0;PQA=0;PQR=0;PRO=0;QA=6034;QR=13598;RO=355;RPL=0;RPP=350.446;RPPR=773.883;RPR=160;RUN=1;SAF=160;SAP=350.446;SAR=0;SRF=355;SRP=773.883;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:61:53,8:53:2035:8:297:-8.71983,0,-165.023 0/1:110:84,26:84:3217:26:990:-56.2976,0,-256.566 0/1:68:54,14:54:2081:14:537:-28.2043,0,-167.05 0/1:95:70,25:70:2685:25:947:-56.9467,0,-213.24 0/1:84:46,38:46:1732:38:1439:-104.501,0,-130.848 0/1:97:48,49:48:1848:49:1824:-135.209,0,-137.369 dDocent_Contig_8370 48 . A C 191.662 . AB=0.236842;ABP=25.8679;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=323;DPB=323;DPRA=0.666667;EPP=22.5536;EPPR=684.853;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=353;QR=12555;RO=314;RPL=0;RPP=22.5536;RPPR=684.853;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=314;SRP=684.853;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:44,0:44:1750:0:0:0,-13.2453,-157.719 0/0:61:61,0:61:2410:0:0:0,-18.3628,-217.048 0/0:51:51,0:51:2035:0:0:0,-15.3525,-183.338 0/1:38:29,9:29:1159:9:353:-20.6891,0,-93.1537 0/0:61:61,0:61:2458:0:0:0,-18.3628,-221.357 0/0:68:68,0:68:2743:0:0:0,-20.47,-246.979 dDocent_Contig_8372 12 . G A 259.404 . AB=0.289474;ABP=17.6392;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=229;DPB=229;DPRA=0.991304;EPP=39.9253;EPPR=461.191;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.647059;PAIREDR=0.483412;PAO=0;PQA=0;PQR=0;PRO=0;QA=662;QR=8383;RO=211;RPL=0;RPP=39.9253;RPPR=461.191;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=211;SRP=461.191;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:27,11:27:1073:11:425:-27.1617,0,-85.4226 0/0:39:36,3:36:1442:3:122:0,-0.367677,-118.66 0/0:41:41,0:41:1628:0:0:0,-12.3422,-146.751 0/0:37:34,3:34:1347:3:115:0,-0.415725,-110.776 0/0:42:42,0:42:1659:0:0:0,-12.6433,-149.548 0/0:32:31,0:31:1234:0:0:0,-9.33193,-110.929 dDocent_Contig_8373 58 . G A 530.505 . AB=0.247312;ABP=54.5886;AC=1;AF=0.0833333;AN=12;AO=29;CIGAR=1X;DP=698;DPB=698;DPRA=0.901606;EPP=65.983;EPPR=1455.73;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1152;QR=25983;RO=669;RPL=29;RPP=65.983;RPPR=1455.73;RPR=0;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=669;SRP=1455.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:79:78,1:78:3068:1:38:0,-19.9841,-272.432 0/1:93:70,23:70:2738:23:914:-54.5734,0,-218.56 0/0:179:176,3:176:6810:3:119:0,-42.7899,-601.586 0/0:98:96,2:96:3709:2:81:0,-21.8152,-326.185 0/0:145:145,0:145:5649:0:0:0,-43.6493,-508.289 0/0:104:104,0:104:4009:0:0:0,-31.3071,-360.839 dDocent_Contig_8374 29 . C A 207.182 . AB=0.217391;ABP=34.9215;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=181;DPB=181;DPRA=1.08046;EPP=29.068;EPPR=369.989;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.25;PAIREDR=0.473373;PAO=0;PQA=0;PQR=0;PRO=0;QA=479;QR=6787;RO=169;RPL=0;RPP=29.068;RPPR=369.989;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=169;SRP=369.989;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1326:0:0:0,-9.93399,-119.601 0/0:27:26,1:26:1039:1:41:0,-4.03324,-89.7069 0/0:28:28,0:28:1128:0:0:0,-8.42884,-101.801 0/1:46:36,10:36:1453:10:397:-22.2411,0,-117.171 0/0:21:20,1:20:801:1:41:0,-2.22706,-68.3114 0/0:26:26,0:26:1040:0:0:0,-7.82678,-93.8899 dDocent_Contig_8375 66 . G T 1645.68 . AB=0.163851;ABP=584.041;AC=2;AF=0.166667;AN=12;AO=97;CIGAR=1X;DP=706;DPB=706;DPRA=10.386;EPP=213.643;EPPR=1325.44;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3840;QR=23952;RO=609;RPL=97;RPP=213.643;RPPR=1325.44;RPR=0;RUN=1;SAF=97;SAP=213.643;SAR=0;SRF=609;SRP=1325.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:1141:0:0:0,-8.72987,-102.972 0/0:29:29,0:29:1143:0:0:0,-8.72987,-103.152 0/0:35:35,0:35:1359:0:0:0,-10.536,-122.567 0/0:21:21,0:21:835:0:0:0,-6.32163,-75.4625 0/1:326:285,41:285:11204:41:1648:-50.4096,0,-909.497 0/1:266:210,56:210:8270:56:2192:-117.38,0,-663.807 dDocent_Contig_8379 25 . T A 3003.2 . AB=0.386986;ABP=35.4039;AC=6;AF=0.5;AN=12;AO=113;CIGAR=1X;DP=292;DPB=292;DPRA=0;EPP=248.387;EPPR=391.704;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.99115;PAIREDR=0.955307;PAO=0;PQA=0;PQR=0;PRO=0;QA=4417;QR=6544;RO=179;RPL=0;RPP=248.387;RPPR=391.704;RPR=113;RUN=1;SAF=113;SAP=248.387;SAR=0;SRF=179;SRP=391.704;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:79:53,26:53:1930:26:1020:-68.3141,0,-150.173 0/1:67:30,37:30:1077:37:1470:-112.383,0,-77.0611 0/1:46:38,8:38:1392:8:314:-14.7751,0,-111.712 0/1:35:26,9:26:948:9:354:-21.6828,0,-75.0903 0/1:6:3,3:3:110:3:113:-8.73211,0,-8.45437 0/1:59:29,30:29:1087:30:1146:-85.6551,0,-80.3751 dDocent_Contig_8380 10 . C T 183.538 . AB=0.149425;ABP=95.8844;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=423;DPB=423;DPRA=1.45306;EPP=35.5824;EPPR=888.971;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992647;PAO=0;PQA=0;PQR=0;PRO=0;QA=588;QR=16258;RO=408;RPL=0;RPP=35.5824;RPPR=888.971;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=408;SRP=888.971;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:52:52,0:52:2059:0:0:0,-15.6536,-185.499 0/0:91:89,2:89:3563:2:80:0,-19.8019,-313.107 0/0:86:86,0:86:3417:0:0:0,-25.8886,-307.561 0/0:74:74,0:74:2924:0:0:0,-22.2762,-263.257 0/0:33:33,0:33:1321:0:0:0,-9.93399,-119.154 0/1:87:74,13:74:2974:13:508:-19.8767,0,-241.559 dDocent_Contig_8381 85 . C G 2897.76 . AB=0.544186;ABP=6.65635;AC=6;AF=0.5;AN=12;AO=117;CIGAR=1X;DP=215;DPB=215;DPRA=0;EPP=257.073;EPPR=215.815;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.991453;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4042;QR=3374;RO=98;RPL=117;RPP=257.073;RPPR=215.815;RPR=0;RUN=1;SAF=117;SAP=257.073;SAR=0;SRF=98;SRP=215.815;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:43:17,26:17:594:26:895:-67.9207,0,-40.8443 0/1:41:28,13:28:955:13:445:-28.0358,0,-73.9179 0/1:13:4,9:4:129:9:315:-24.7754,0,-8.01574 0/1:38:14,24:14:489:24:831:-63.6694,0,-32.903 0/1:31:11,20:11:380:20:689:-52.9991,0,-25.201 0/1:49:24,25:24:827:25:867:-63.5972,0,-59.9972 dDocent_Contig_8382 57 . G A 77.6596 . AB=0.5;ABP=3.0103;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=283;DPB=283;DPRA=0.108303;EPP=9.52472;EPPR=611.023;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=119;QR=11016;RO=280;RPL=3;RPP=9.52472;RPPR=611.023;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=280;SRP=611.023;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:73:73,0:73:2870:0:0:0,-21.9752,-258.415 0/0:61:61,0:61:2386:0:0:0,-18.3628,-214.904 0/0:61:61,0:61:2432:0:0:0,-18.3628,-219.031 0/0:65:65,0:65:2556:0:0:0,-19.5669,-230.184 0/0:17:17,0:17:656:0:0:0,-5.11751,-59.3619 0/1:6:3,3:3:116:3:119:-9.28883,0,-9.0101 dDocent_Contig_8384 7 . C T 15210.8 . AB=0.197789;ABP=648.754;AC=3;AF=0.25;AN=12;AO=161;CIGAR=2X;DP=814;DPB=814;DPRA=0;EPP=352.617;EPPR=313.531;GTI=0;LEN=1;MEANALT=3.16667;MQM=28.795;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.0248447;PAIREDR=0.923077;PAO=0;PQA=0;PQR=0;PRO=0;QA=6095;QR=5486;RO=143;RPL=0;RPP=352.617;RPPR=313.531;RPR=161;RUN=1;SAF=161;SAP=352.617;SAR=0;SRF=143;SRP=313.531;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:126:33,27,63:33:1261:27,63:1016,2434:-185.965,-131.751,-227.092,0,-39.3726,-84.5424 0|0:194:60,41,89:60:2313:41,89:1568,3406:-252.292,-192.598,-370.199,0,-112.272,-163.22 1|0:100:15,21,64:15:576:21,64:793,2451:-199.407,-152.638,-193.6,-3.94097,0,-31.991 0|0:99:15,26,57:15:576:26,57:966,2191:-171.935,-130.745,-170.204,0,-1.67761,-30.18 1|0:152:10,21,119:10:387:21,119:794,4583:-391.267,-341.559,-367.028,-20.8702,0,-16.8589 1|0:143:10,25,101:10:373:25,101:958,3865:-331.433,-282.032,-305.043,-21.809,0,-21.9608 dDocent_Contig_8385 97 . C A 158.347 . AB=0.204082;ABP=40.2799;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=190;DPB=190;DPRA=1.73759;EPP=24.725;EPPR=393.875;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.544444;PAO=0;PQA=0;PQR=0;PRO=0;QA=353;QR=6348;RO=180;RPL=5;RPP=3.0103;RPPR=30.8051;RPR=5;RUN=1;SAF=5;SAP=3.0103;SAR=5;SRF=114;SRP=30.8051;SRR=66;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:668:0:0:0,-5.71957,-60.4296 0/0:26:26,0:26:898:0:0:0,-7.82678,-81.1152 0/0:14:14,0:14:497:0:0:0,-4.21442,-45.0526 0/0:35:35,0:35:1272:0:0:0,-10.536,-114.764 0/1:49:39,10:39:1363:10:353:-17.3576,0,-108.198 0/0:47:47,0:47:1650:0:0:0,-14.1484,-148.769 dDocent_Contig_8386 7 . C T 42.9907 . AB=0.119403;ABP=87.3088;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=495;DPB=495;DPRA=1.06502;EPP=31.2394;EPPR=1049.66;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.7905;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993776;PAO=0;PQA=0;PQR=0;PRO=0;QA=476;QR=18449;RO=482;RPL=0;RPP=31.2394;RPPR=1049.66;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=482;SRP=1049.66;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:82:82,0:82:3136:0:0:0,-24.6845,-281.976 0/0:105:100,5:100:3810:5:191:0,-14.0496,-325.45 0/0:62:62,0:62:2374:0:0:0,-18.6639,-213.766 0/1:67:59,8:59:2286:8:285:-5.82193,0,-185.783 0/0:94:94,0:94:3580:0:0:0,-28.2968,-322.309 0/0:85:85,0:85:3263:0:0:0,-25.5875,-293.809 dDocent_Contig_8387 7 . C T 13991.6 . AB=0.471778;ABP=9.50622;AC=7;AF=0.583333;AN=12;AO=443;CIGAR=1X2M;DP=939;DPB=939;DPRA=0;EPP=964.973;EPPR=734.797;GTI=0;LEN=1;MEANALT=2.33333;MQM=59.9797;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.963883;PAIREDR=0.934718;PAO=0;PQA=0;PQR=0;PRO=0;QA=16928;QR=12842;RO=337;RPL=0;RPP=964.973;RPPR=734.797;RPR=443;RUN=1;SAF=443;SAP=964.973;SAR=0;SRF=337;SRP=734.797;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:139:64,23,0,52:64:2458:23,0,52:868,0,1975:-142.691,-90.818,-285.674,-161.957,-292.597,-363.736,0,-130.644,-201.782,-186.128 0|1:198:75,25,0,97:75:2848:25,0,97:956,0,3706:-281.493,-225.623,-451.647,-304.071,-459.173,-537.621,0,-155.102,-233.55,-204.35 0|1:132:67,5,0,60:67:2542:5,0,60:192,0,2289:-167.61,-172.018,-378.951,-187.779,-380.456,-396.217,0,-192.673,-208.435,-190.373 0|1:195:63,15,0,117:63:2407:15,0,117:572,0,4476:-348.327,-320.367,-513.348,-367.292,-517.864,-564.788,0,-150.573,-197.497,-162.277 1|1:115:16,0,55,44:16:596:0,55,44:0,2093,1664:-254.473,-259.289,-308.075,-87.6176,-136.403,-119.846,-122.891,-171.676,0,-158.431 0|1:160:52,0,34,73:52:1991:0,34,73:0,1270,2818:-215.787,-231.441,-394.838,-127.466,-290.862,-280.627,0,-163.402,-59.4273,-141.427 dDocent_Contig_8388 56 . A G 1785.45 . AB=0.307692;ABP=90.7044;AC=5;AF=0.416667;AN=12;AO=85;CIGAR=1X8M;DP=285;DPB=286.778;DPRA=0;EPP=187.585;EPPR=424.276;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=0.858824;PAIREDR=0.845361;PAO=0;PQA=0;PQR=0;PRO=0;QA=3006;QR=7080;RO=194;RPL=44;RPP=3.24022;RPPR=3.05507;RPR=41;RUN=1;SAF=44;SAP=3.24022;SAR=41;SRF=96;SRP=3.05507;SRR=98;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:48:29,0,19:29:1019:0,19:0,676:-46.7145,-55.4444,-138.37,0,-83.2791,-77.5595 0|1:46:27,4,15:27:988:4,15:151,556:-37.3595,-33.1099,-112.636,0,-68.3459,-76.2079 0|1:36:27,0,8:27:1012:0,8:0,271:-13.9827,-22.1105,-105.035,0,-83.0723,-80.6641 0|0:12:10,0,1:10:361:0,1:0,35:0,-3.0103,-32.5973,-0.022632,-29.7483,-29.4472 0|1:64:46,0,18:46:1669:0,18:0,640:-38.662,-52.5094,-188.789,0,-136.637,-131.218 0|1:79:55,0,24:55:2031:0,24:0,828:-51.0477,-67.6043,-233.733,0,-166.481,-159.256 dDocent_Contig_8389 21 . T A 406.653 . AB=0.192661;ABP=92.4391;AC=2;AF=0.166667;AN=12;AO=28;CIGAR=1X;DP=312;DPB=312;DPRA=1.27273;EPP=63.8115;EPPR=619.708;GTI=0;LEN=1;MEANALT=1;MQM=54;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0.838028;PAO=0;PQA=0;PQR=0;PRO=0;QA=1113;QR=11405;RO=284;RPL=0;RPP=63.8115;RPPR=619.708;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=284;SRP=619.708;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:52:48,4:48:1936:4:161:0,-1.03955,-159.819 0/0:51:51,0:51:2060:0:0:0,-15.3525,-185.579 0/0:37:37,0:37:1501:0:0:0,-11.1381,-135.328 0/0:63:60,3:60:2378:3:103:0,-10.0192,-205.232 0/1:45:36,9:36:1461:9:362:-19.0558,0,-118.186 0/1:64:52,12:52:2069:12:487:-24.8313,0,-167.123 dDocent_Contig_8390 45 . C T 584.507 . AB=0.19375;ABP=133.353;AC=2;AF=0.166667;AN=12;AO=35;CIGAR=1X;DP=307;DPB=307;DPRA=4.7931;EPP=79.0118;EPPR=593.651;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992647;PAO=0;PQA=0;PQR=0;PRO=0;QA=1376;QR=10491;RO=272;RPL=0;RPP=79.0118;RPPR=593.651;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=272;SRP=593.651;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:45:42,3:42:1549:3:122:0,-2.17386,-128.274 0/1:69:61,8:61:2400:8:317:-8.12409,0,-195.401 0/1:91:68,23:68:2602:23:896:-53.5484,0,-206.929 0/0:73:72,1:72:2814:1:41:0,-17.8806,-249.304 0/0:12:12,0:12:459:0:0:0,-3.61236,-41.6532 0/0:17:17,0:17:667:0:0:0,-5.11751,-60.3628 dDocent_Contig_8391 30 . C T 93.9437 . AB=0.185185;ABP=26.2531;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=249;DPB=249;DPRA=0.766667;EPP=16.0391;EPPR=530.678;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.166667;PAIREDR=0.522634;PAO=0;PQA=0;PQR=0;PRO=0;QA=235;QR=9761;RO=243;RPL=0;RPP=16.0391;RPPR=530.678;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=243;SRP=530.678;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:27:22,5:22:886:5:204:-10.6162,0,-71.9192 0/0:42:41,1:41:1641:1:31:0,-9.54381,-144.815 0/0:34:34,0:34:1354:0:0:0,-10.235,-122.115 0/0:53:53,0:53:2145:0:0:0,-15.9546,-193.22 0/0:42:42,0:42:1682:0:0:0,-12.6433,-151.599 0/0:51:51,0:51:2053:0:0:0,-15.3525,-184.954 dDocent_Contig_8392 68 . G T 1290.67 . AB=0.315152;ABP=51.9803;AC=4;AF=0.333333;AN=12;AO=52;CIGAR=1X;DP=228;DPB=228;DPRA=1.30952;EPP=115.927;EPPR=385.189;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.615385;PAIREDR=0.397727;PAO=0;PQA=0;PQR=0;PRO=0;QA=2051;QR=6872;RO=176;RPL=52;RPP=115.927;RPPR=368.015;RPR=0;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=174;SRP=368.015;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:20,6:20:758:6:245:-14.6027,0,-60.7041 0/1:54:34,20:34:1343:20:796:-55.6966,0,-104.872 0/1:40:32,8:32:1235:8:322:-17.3066,0,-99.3854 0/1:45:27,18:27:1057:18:688:-48.6833,0,-81.8621 0/0:33:33,0:33:1301:0:0:0,-9.93399,-117.359 0/0:30:30,0:30:1178:0:0:0,-9.0309,-106.287 dDocent_Contig_8393 66 . T C 39.1243 . AB=0.116279;ABP=58.0041;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=245;DPB=245;DPRA=1.06436;EPP=13.8677;EPPR=524.164;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.6;PAIREDR=0.583333;PAO=0;PQA=0;PQR=0;PRO=0;QA=200;QR=8372;RO=240;RPL=5;RPP=13.8677;RPPR=524.164;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=240;SRP=524.164;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1135:0:0:0,-9.93399,-102.436 0/0:41:41,0:41:1433:0:0:0,-12.3422,-129.256 0/0:42:42,0:42:1490:0:0:0,-12.6433,-134.379 0/0:50:50,0:50:1781:0:0:0,-15.0515,-160.551 0/1:43:38,5:38:1278:5:200:-5.43525,0,-102.349 0/0:36:36,0:36:1255:0:0:0,-10.8371,-113.229 dDocent_Contig_8394 22 . T A 1989.45 . AB=0.375;ABP=30.1537;AC=6;AF=0.5;AN=12;AO=75;CIGAR=1X1M1X;DP=200;DPB=200;DPRA=0;EPP=165.871;EPPR=263.587;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.8;PAIREDR=0.825;PAO=0;PQA=0;PQR=0;PRO=0;QA=2973;QR=4756;RO=120;RPL=0;RPP=165.871;RPPR=263.587;RPR=75;RUN=1;SAF=75;SAP=165.871;SAR=0;SRF=120;SRP=263.587;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:18:13,5,0:13:508:5,0:201,0:-13.0524,0,-40.6472,-16.9657,-42.1523,-58.7196 0|1:53:26,27,0:26:1039:27,0:1059,0:-79.6449,0,-77.8503,-87.4716,-85.9781,-173.054 0|1:27:18,9,0:18:712:9,0:361,0:-24.7264,0,-56.2765,-30.145,-58.9858,-88.7319 0|1:43:27,16,0:27:1080:16,0:627,0:-43.8173,0,-84.5433,-51.9451,-89.3598,-140.91 0|1:42:24,15,3:24:944:15,3:602,122:-42.3741,0,-73.1188,-39.5347,-67.5695,-116.273 0|1:17:12,3,2:12:473:3,2:123,78:-6.55177,0,-38.0136,-3.76046,-32.5057,-42.059 dDocent_Contig_8395 42 . G A 2905.41 . AB=0.169374;ABP=412.24;AC=4;AF=0.333334;AN=12;AO=75;CIGAR=1X3M;DP=734;DPB=734;DPRA=0;EPP=165.871;EPPR=1147.38;GTI=0;LEN=1;MEANALT=2.75;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.988615;PAO=0;PQA=0;PQR=0;PRO=0;QA=2956;QR=20754;RO=527;RPL=0;RPP=165.871;RPPR=1147.38;RPR=75;RUN=1;SAF=75;SAP=165.871;SAR=0;SRF=527;SRP=1147.38;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:117:70,21,0,26:70:2761:21,0,26:825,0,1044:-64.9556,-18.1772,-239.008,-86.0277,-245.33,-313.184,0,-159.305,-227.159,-219.332 0|1:121:91,18,7,5:91:3596:18,7,5:717,279,201:-31.6476,0,-290.488,-36.0688,-272.933,-329.869,-42.4774,-279.343,-315.413,-336.88 0|0:65:55,4,2,4:55:2158:4,2,4:160,82,152:0,-3.37254,-179.638,-9.78452,-174.073,-186.652,-4.10206,-168.379,-174.791,-180.355 0|1:121:91,26,0,3:91:3596:26,0,3:1014,0,122:-55.9411,0,-288.077,-83.3348,-295.903,-379.244,-73.2698,-285.84,-369.18,-368.277 0|1:204:133,14,56,0:133:5208:14,56,0:544,2191,0:-140.094,-135.435,-559.422,0,-383.523,-411.36,-180.131,-563.637,-428.218,-608.332 0|1:106:87,9,10,0:87:3435:9,10,0:349,404,0:-7.12453,-4.65079,-284.564,0,-253.967,-279.627,-33.3141,-287.273,-282.637,-315.944 dDocent_Contig_8396 25 . T C 132.413 . AB=0.147059;ABP=39.7976;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X2M1X2M1X;DP=264;DPB=264;DPRA=0.689189;EPP=13.8677;EPPR=513.306;GTI=0;LEN=1;MEANALT=2;MQM=27;MQMR=60;NS=6;NUMALT=3;ODDS=1.38778e-17;PAIRED=0;PAIREDR=0.965957;PAO=0;PQA=0;PQR=0;PRO=0;QA=200;QR=9193;RO=235;RPL=0;RPP=13.8677;RPPR=513.306;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=235;SRP=513.306;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:48:45,0,0,2:45:1765:0,0,2:0,0,81:0,-13.5463,-158.776,-13.5463,-158.776,-158.776,-6.66418,-152.096,-152.096,-151.494 0|1:34:26,5,0,3:26:1023:5,0,3:200,0,123:-2.63324,0,-82.6342,-10.46,-84.1394,-94.6692,-0.254682,-73.9854,-84.5138,-83.6107 0|0:29:28,0,1,0:28:1085:0,1,0:0,41,0:0,-8.42884,-97.5368,-4.6353,-94.152,-93.8509,-8.42884,-97.5368,-94.152,-97.5368 0|0:19:15,0,0,4:15:588:0,0,4:0,0,159:-8.97126,-13.4867,-61.833,-13.4867,-61.833,-61.833,0,-48.7422,-48.7422,-47.5381 0|0:71:67,0,4,0:67:2619:0,4,0:0,148,0:0,-20.169,-235.494,-7.69635,-223.392,-222.188,-20.169,-235.494,-223.392,-235.494 0|0:63:54,0,0,7:54:2113:0,0,7:0,0,280:-6.80495,-23.0606,-196.773,-23.0606,-196.773,-196.773,0,-173.707,-173.707,-171.6 dDocent_Contig_8397 89 . C G 741.869 . AB=0.451613;ABP=3.64073;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=3M1X4M1X2M;DP=755;DPB=755.273;DPRA=0.214088;EPP=33.4109;EPPR=1525.21;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=458;QR=23425;RO=701;RPL=14;RPP=33.4109;RPPR=1525.21;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=701;SRP=1525.21;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:107:106,0,0,0:106:3560:0,0,0:0,0,0:0,-31.9092,-320.284,-31.9092,-320.284,-320.284,-31.9092,-320.284,-320.284,-320.284 0|0:255:251,1,0,0:251:8418:1,0,0:35,0,0:0,-72.69,-754.275,-75.5585,-754.576,-757.424,-75.5585,-754.576,-757.424,-757.424 0|0:111:109,0,0,0:109:3660:0,0,0:0,0,0:0,-32.8123,-329.559,-32.8123,-329.559,-329.559,-32.8123,-329.559,-329.559,-329.559 0|0:229:215,0,0,11:215:7109:0,0,11:0,0,379:0,-64.7214,-639.64,-64.7214,-639.64,-639.64,-33.7771,-608.853,-608.853,-605.541 1|0:31:0,2,14,14:0:0:2,14,14:65,458,477:-75.7098,-70.4638,-69.8617,-38.7201,-33.4751,-34.5056,-37.0025,-31.7561,0,-32.7881 0|0:22:20,0,0,0:20:678:0,0,0:0,0,0:0,-6.0206,-60.9943,-6.0206,-60.9943,-60.9943,-6.0206,-60.9943,-60.9943,-60.9943 dDocent_Contig_8398 52 . T A 3889.68 . AB=0.425926;ABP=18.4519;AC=6;AF=0.5;AN=12;AO=138;CIGAR=1X;DP=324;DPB=324;DPRA=0;EPP=302.673;EPPR=406.904;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.789855;PAIREDR=0.817204;PAO=0;PQA=0;PQR=0;PRO=0;QA=5510;QR=7437;RO=186;RPL=138;RPP=302.673;RPPR=406.904;RPR=0;RUN=1;SAF=138;SAP=302.673;SAR=0;SRF=186;SRP=406.904;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:48:13,35:13:520:35:1387:-110.636,0,-32.6954 0/1:67:40,27:40:1597:27:1071:-76.5097,0,-123.791 0/1:52:27,25:27:1062:25:1015:-75.9897,0,-80.2181 0/1:79:55,24:55:2206:24:957:-62.6487,0,-174.926 0/1:35:25,10:25:1005:10:396:-25.461,0,-80.2082 0/1:43:26,17:26:1047:17:684:-48.9452,0,-81.5746 dDocent_Contig_8399 125 . A C 44.4017 . AB=0.135135;ABP=45.7942;AC=2;AF=0.166667;AN=12;AO=5;CIGAR=1X;DP=95;DPB=95;DPRA=1.27586;EPP=13.8677;EPPR=198.443;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.8;PAO=0;PQA=0;PQR=0;PRO=0;QA=200;QR=3522;RO=90;RPL=0;RPP=13.8677;RPPR=198.443;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=198.443;SRR=90;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:8:8,0:8:313:0:0:0,-2.40824,-28.5329 0/0:15:15,0:15:582:0:0:0,-4.51545,-52.7132 0/0:25:25,0:25:1000:0:0:0,-7.52575,-90.296 0/1:20:17,3:17:666:3:119:-5.07458,0,-54.2477 0/1:17:15,2:15:587:2:81:-2.56822,0,-48.045 0/0:10:10,0:10:374:0:0:0,-3.0103,-33.9968 dDocent_Contig_8400 51 . C A 1762.08 . AB=0.280769;ABP=111.551;AC=3;AF=0.3;AN=10;AO=91;CIGAR=2X;DP=622;DPB=622;DPRA=0;EPP=200.614;EPPR=1153.89;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3551;QR=21026;RO=530;RPL=91;RPP=200.614;RPPR=1153.89;RPR=0;RUN=1;SAF=91;SAP=200.614;SAR=0;SRF=530;SRP=1153.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:102:79,23:79:3107:23:897:-50.3284,0,-249.016 0|0:245:232,13:232:9190:13:497:0,-28.6815,-781.499 0|0:117:112,5:112:4457:5:189:0,-17.8475,-383.706 0|1:148:99,49:99:3949:49:1928:-129.174,0,-310.863 .:.:.:.:.:.:.:. 0|1:10:8,1:8:323:1:40:-0.896762,0,-26.3473 dDocent_Contig_8401 30 . T A 326.864 . AB=0.139665;ABP=204.884;AC=2;AF=0.166667;AN=12;AO=25;CIGAR=1X;DP=493;DPB=493;DPRA=1.14013;EPP=57.2971;EPPR=1019.26;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=990;QR=18701;RO=468;RPL=0;RPP=57.2971;RPPR=1019.26;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=468;SRP=1019.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:61:61,0:61:2443:0:0:0,-18.3628,-220.009 0/0:90:90,0:90:3579:0:0:0,-27.0927,-322.14 0/1:94:82,12:82:3261:12:471:-14.4397,0,-265.256 0/1:85:72,13:72:2894:13:519:-21.4686,0,-234.968 0/0:101:101,0:101:4048:0:0:0,-30.404,-364.288 0/0:62:62,0:62:2476:0:0:0,-18.6639,-222.979 dDocent_Contig_8402 33 . T C 4600.86 . AB=0.0434783;ABP=2667.69;AC=2;AF=0.166667;AN=12;AO=64;CIGAR=24M1X5M1X12M;DP=1695;DPB=1631.21;DPRA=0;EPP=141.985;EPPR=617.537;GTI=0;LEN=1;MEANALT=16.5;MQM=60;MQMR=60;NS=6;NUMALT=6;ODDS=0;PAIRED=1;PAIREDR=0.996466;PAO=0;PQA=0;PQR=0;PRO=0;QA=2510;QR=11045;RO=283;RPL=0;RPP=141.985;RPPR=617.537;RPR=64;RUN=1;SAF=64;SAP=141.985;SAR=0;SRF=283;SRP=617.537;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:456:38,17,0,0,23,0,0:38:1492:17,0,0,23,0,0:664,0,0,905,0,0:-63.004,-19.8579,-137.453,-74.4431,-142.571,-197.156,-74.4431,-142.571,-197.156,-197.156,0,-68.1279,-122.713,-122.713,-115.789,-74.4431,-142.571,-197.156,-197.156,-122.713,-197.156,-74.4431,-142.571,-197.156,-197.156,-122.713,-197.156,-197.156 0|1:370:86,8,0,0,31,2,10:86:3351:8,0,0,31,2,10:313,0,0,1208,76,343:-73.3935,-73.5462,-346.56,-99.2821,-348.968,-374.704,-99.2821,-348.968,-374.704,-374.704,0,-249.687,-275.422,-275.422,-266.09,-93.0492,-342.735,-368.471,-368.471,-269.189,-367.869,-71.4439,-321.13,-346.865,-346.865,-247.584,-340.632,-343.855 0|0:272:58,3,12,0,8,0,5:58:2261:3,12,0,8,0,5:121,458,0,319,0,195:-20.1116,-27.5967,-212.534,0,-175.866,-182.228,-37.5714,-213.437,-185.84,-223.411,-11.3004,-187.166,-159.57,-197.141,-194.733,-37.5714,-213.437,-185.84,-223.411,-197.141,-223.411,-21.5417,-197.407,-169.811,-207.382,-181.111,-207.382,-205.877 0|0:374:75,7,4,0,2,34,4:75:2908:7,4,0,2,34,4:273,147,0,78,1241,152:-78.7904,-78.9281,-315.731,-89.3524,-305.823,-327.058,-101.368,-317.838,-328.263,-340.278,-94.9564,-311.427,-321.851,-333.867,-333.265,0,-216.471,-226.895,-238.911,-232.499,-228.676,-88.9045,-305.375,-315.799,-327.815,-321.404,-226.447,-326.611 0|0:118:26,37,1,0,0,30,0:26:1033:37,1,0,0,30,0:1463,40,0,0,1090,0:-116.513,-3.93224,-77.8524,-121.045,-85.6951,-205.795,-124.34,-88.9905,-206.096,-209.392,-124.34,-88.9905,-206.096,-209.392,-209.392,-35.3493,0,-117.106,-120.401,-120.401,-111.37,-124.34,-88.9905,-206.096,-209.392,-209.392,-120.401,-209.392 0|0:105:0,17,0,7,0,21,0:0:0:17,0,7,0,21,0:661,0,254,0,795,0:-119.496,-65.1737,-60.0562,-119.496,-65.1737,-119.496,-98.7584,-44.4364,-98.7584,-96.6512,-119.496,-65.1737,-119.496,-98.7584,-119.496,-54.3233,0,-54.3233,-33.5862,-54.3233,-48.0017,-119.496,-65.1737,-119.496,-98.7584,-119.496,-54.3233,-119.496 dDocent_Contig_8403 9 . C A 3634.68 . AB=0.0769231;ABP=124.279;AC=0;AF=0;AN=12;AO=6;CIGAR=1X3M1X9M;DP=457;DPB=451.5;DPRA=0;EPP=16.0391;EPPR=441.648;GTI=0;LEN=1;MEANALT=7;MQM=60;MQMR=60;NS=6;NUMALT=6;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0.333333;PQA=12;PQR=12;PRO=0.333333;QA=239;QR=7933;RO=202;RPL=0;RPP=16.0391;RPPR=441.648;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=202;SRP=441.648;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:78:53,6,4,0,0,0,11:53:2090:6,4,0,0,0,11:239,163,0,0,0,442:-20.4677,-16.7411,-186.891,-23.0276,-175.303,-193.781,-36.4223,-188.697,-194.985,-208.379,-36.4223,-188.697,-194.985,-208.379,-208.379,-36.4223,-188.697,-194.985,-208.379,-208.379,-208.379,0,-152.276,-158.564,-171.958,-171.958,-171.958,-168.646 0|0:99:74,0,6,8,0,2,9:74:2908:0,6,8,0,2,9:0,225,319,0,81,347:-6.20367,-28.4799,-267.663,-10.3831,-249.557,-247.751,-2.2099,-241.391,-223.286,-238.983,-28.4799,-267.663,-249.557,-241.391,-267.663,-21.8005,-260.983,-242.878,-234.712,-260.983,-260.381,0,-239.175,-221.07,-212.903,-239.175,-232.495,-236.465 0|0:51:33,0,8,0,2,0,5:33:1280:0,8,0,2,0,5:0,319,0,81,0,173:-16.046,-25.98,-131.137,0,-105.16,-102.752,-25.98,-131.137,-105.16,-131.137,-19.53,-124.687,-98.7102,-124.687,-124.085,-25.98,-131.137,-105.16,-131.137,-124.687,-131.137,-11.9501,-117.095,-91.1192,-117.095,-110.645,-117.095,-115.59 0|0:44:12,0,6,1,0,17,8:12:472:0,6,1,0,17,8:0,242,40,0,669,325:-51.4073,-55.0197,-93.8435,-35.2384,-74.0617,-72.2555,-51.7247,-90.5484,-70.7666,-90.2473,-55.0197,-93.8435,-74.0617,-90.5484,-93.8435,0,-38.8183,-19.0374,-35.5233,-38.8183,-33.7007,-28.2126,-67.0363,-47.2542,-63.7412,-67.0363,-12.0113,-64.6281 0|0:99:28,0,9,4,0,40,14:28:1103:0,9,4,0,40,14:0,354,157,0,1578,572:-121.398,-129.826,-220.569,-100.851,-191.593,-188.884,-116.914,-207.657,-178.681,-206.453,-129.826,-220.569,-191.593,-207.657,-220.569,0,-90.7404,-61.7651,-77.8282,-90.7404,-78.6992,-82.6246,-173.368,-144.392,-160.456,-173.368,-43.5379,-169.154 0|0:86:2,0,9,10,11,36,14:2:80:0,9,10,11,36,14:0,346,385,440,1452,566:-159.167,-159.769,-166.359,-131.662,-138.252,-135.543,-128.159,-134.75,-106.643,-131.739,-124.918,-131.509,-103.402,-99.8995,-128.197,-40.0777,-46.6682,-18.5619,-15.0588,-11.8177,-35.8311,-113.104,-119.694,-91.5876,-88.0848,-84.8437,0,-115.48 dDocent_Contig_8404 76 . G A 939.14 . AB=0.212766;ABP=70.3721;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=7M2D1M1X1M1X1M;DP=132;DPB=129.714;DPRA=0;EPP=46.4397;EPPR=163.699;GTI=0;LEN=1;MEANALT=2.75;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.65;PAIREDR=0.77027;PAO=0;PQA=0;PQR=0;PRO=0;QA=786;QR=2832;RO=74;RPL=0;RPP=46.4397;RPPR=163.699;RPR=20;RUN=1;SAF=0;SAP=46.4397;SAR=20;SRF=0;SRP=163.699;SRR=74;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:19:9,0,6,3:9:339:0,6,3:0,231,103:-16.2697,-18.979,-46.7585,0,-27.7927,-25.9865,-10.6279,-38.4007,-19.437,-37.4976 0|0:29:17,0,4,7:17:640:0,4,7:0,157,240:-14.3392,-19.4567,-71.9015,-6.52964,-58.9856,-57.7815,0,-52.4252,-39.5099,-50.318 0|1:31:17,4,9,0:17:654:4,9,0:138,359,0:-24.4828,-18.4029,-70.8861,0,-42.5184,-51.0136,-29.6003,-72.0902,-53.7229,-83.2961 0|0:15:6,0,1,8:6:232:0,1,8:0,39,276:-20.5768,-22.383,-41.454,-19.1721,-38.2463,-37.9453,0,-19.0536,-15.8472,-16.6453 0|0:27:18,0,0,9:18:695:0,0,9:0,0,307:-19.8337,-25.2523,-82.3612,-25.2523,-82.3612,-82.3612,0,-57.4648,-57.4648,-54.7556 0|0:11:7,0,0,4:7:272:0,0,4:0,0,140:-9.6336,-11.7408,-34.117,-11.7408,-34.117,-34.117,0,-22.74,-22.74,-21.5359 dDocent_Contig_8405 113 . G T 322.141 . AB=0.225806;ABP=63.7415;AC=3;AF=0.25;AN=12;AO=21;CIGAR=1X;DP=154;DPB=154;DPRA=1.52459;EPP=48.6112;EPPR=291.816;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=716;QR=4528;RO=133;RPL=0;RPP=48.6112;RPPR=291.816;RPR=21;RUN=1;SAF=0;SAP=48.6112;SAR=21;SRF=0;SRP=291.816;SRR=133;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:345:0:0:0,-3.0103,-31.3837 0/1:23:19,4:19:632:4:129:-5.00537,0,-50.2701 0/0:13:13,0:13:449:0:0:0,-3.91339,-40.7407 0/0:38:38,0:38:1281:0:0:0,-11.4391,-115.585 0/1:46:35,11:35:1211:11:378:-20.5042,0,-95.4483 0/1:24:18,6:18:610:6:209:-11.9263,0,-47.9952 dDocent_Contig_8406 175 . A G 299.553 . AB=0.324324;ABP=12.9286;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=154;DPB=154;DPRA=0.632479;EPP=29.068;EPPR=311.359;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.809859;PAO=0;PQA=0;PQR=0;PRO=0;QA=484;QR=5627;RO=142;RPL=12;RPP=29.068;RPPR=311.359;RPR=0;RUN=1;SAF=0;SAP=29.068;SAR=12;SRF=0;SRP=311.359;SRR=142;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:763:0:0:0,-5.71957,-68.9889 0/0:31:31,0:31:1233:0:0:0,-9.33193,-111.24 0/0:34:34,0:34:1328:0:0:0,-10.235,-119.784 0/0:33:33,0:33:1291:0:0:0,-9.93399,-116.456 0/1:18:13,5:13:522:5:203:-13.2345,0,-41.9092 0/1:19:12,7:12:490:7:281:-19.9426,0,-38.7316 dDocent_Contig_8407 11 . C T 7705.08 . AB=0.130045;ABP=533.22;AC=1;AF=0.0833333;AN=12;AO=58;CIGAR=1X1M1X3M;DP=474;DPB=474;DPRA=0;EPP=128.956;EPPR=320.045;GTI=0;LEN=1;MEANALT=3.8;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0.913793;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2238;QR=5727;RO=146;RPL=0;RPP=128.956;RPPR=320.045;RPR=58;RUN=1;SAF=58;SAP=128.956;SAR=0;SRF=146;SRP=320.045;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:91:25,4,3,2,57:25:990:4,3,2,57:161,117,80,2257:-178.21,-172.466,-252.741,-176.119,-244.328,-256.695,-179.145,-247.355,-251.008,-260.022,0,-68.2081,-71.8617,-74.8877,-64.3193 0|0:87:38,6,0,3,40:38:1491:6,0,3,40:229,0,114,1576:-118.215,-110.868,-231.677,-129.654,-233.483,-252.27,-120.306,-224.135,-242.921,-242.018,0,-103.838,-122.624,-113.276,-110.583 0|0:116:33,15,0,0,68:33:1266:15,0,0,68:598,0,0,2711:-213.308,-173.995,-273.373,-223.242,-277.889,-327.136,-223.242,-277.889,-327.136,-327.136,0,-54.6368,-103.889,-103.889,-83.4185 1|0:110:22,26,2,1,57:22:878:26,2,1,57:980,78,38,2268:-188.072,-114.414,-178.897,-188.283,-180.313,-259.993,-191.579,-183.608,-257.478,-263.589,-7.95901,0,-73.8653,-77.1606,-63.1183 0|0:42:20,7,2,3,10:20:795:7,2,3,10:270,81,120,395:-26.4833,-10.3358,-73.6825,-25.8236,-69.1101,-90.6779,-22.6183,-65.9048,-81.3949,-87.1715,0,-43.2879,-58.7771,-55.5718,-62.4466 0|0:28:8,0,2,0,18:8:307:0,2,0,18:0,79,0,726:-57.4419,-59.8501,-85.0414,-53.35,-78.5406,-77.9385,-59.8501,-85.0414,-78.5406,-85.0414,0,-25.1876,-18.6844,-25.1876,-19.7691 dDocent_Contig_8408 9 . C T 3974.49 . AB=0.0892857;ABP=85.0609;AC=0;AF=0;AN=12;AO=5;CIGAR=1X2M1X;DP=435;DPB=435;DPRA=0;EPP=13.8677;EPPR=608.851;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.985663;PAO=0;PQA=0;PQR=0;PRO=0;QA=194;QR=10779;RO=279;RPL=0;RPP=13.8677;RPPR=608.851;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=279;SRP=608.851;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:73:55,0,17:55:2116:0,17:0,682:-39.9046,-56.4613,-230.177,0,-173.986,-168.868 0|0:83:60,0,23:60:2291:0,23:0,901:-56.2909,-74.3527,-262.298,0,-188.333,-181.409 0|0:77:45,0,32:45:1756:0,32:0,1274:-91.7378,-105.284,-249.623,0,-144.734,-135.101 0|0:56:33,5,18:33:1266:5,18:194,726:-49.9228,-43.9209,-146.305,0,-87.958,-98.4792 0|0:73:48,0,25:48:1875:0,25:0,990:-67.3818,-81.8313,-235.971,0,-154.534,-147.008 0|0:73:38,0,35:38:1475:0,35:0,1392:-103.433,-114.872,-236.057,0,-121.578,-111.042 dDocent_Contig_8410 11 . C T 142.844 . AB=0.128713;ABP=123.946;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=372;DPB=372;DPRA=0.86;EPP=35.5824;EPPR=778.226;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=593;QR=14207;RO=357;RPL=0;RPP=35.5824;RPPR=778.226;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=357;SRP=778.226;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:48,6:48:1930:6:241:-5.81106,0,-157.638 0/0:71:69,2:69:2756:2:69:0,-14.8226,-241.6 0/0:63:63,0:63:2505:0:0:0,-18.9649,-225.592 0/1:47:40,7:40:1574:7:283:-11.6952,0,-127.749 0/0:69:69,0:69:2765:0:0:0,-20.7711,-248.951 0/0:68:68,0:68:2677:0:0:0,-20.47,-241.056 dDocent_Contig_8411 27 . G T 80.8457 . AB=0.157895;ABP=41.6397;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=125;DPB=125;DPRA=1.5;EPP=22.5536;EPPR=254.901;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.448276;PAO=0;PQA=0;PQR=0;PRO=0;QA=362;QR=4599;RO=116;RPL=0;RPP=22.5536;RPPR=254.901;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=116;SRP=254.901;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:18:15,3:15:606:3:122:-5.95395,0,-49.4601 0/0:37:34,3:34:1370:3:118:0,-0.135906,-112.554 0/1:20:17,3:17:688:3:122:-5.35189,0,-56.2289 0/0:26:26,0:26:1028:0:0:0,-7.82678,-92.8115 0/0:15:15,0:15:572:0:0:0,-4.51545,-51.809 0/0:9:9,0:9:335:0:0:0,-2.70927,-30.4945 dDocent_Contig_8412 54 . A C 59.543 . AB=0.142857;ABP=41.7866;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=248;DPB=248;DPRA=1.44444;EPP=16.0391;EPPR=528.507;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.5;PAIREDR=0.590909;PAO=0;PQA=0;PQR=0;PRO=0;QA=236;QR=9514;RO=242;RPL=6;RPP=16.0391;RPPR=528.507;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=242;SRP=528.507;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:38,0:38:1522:0:0:0,-11.4391,-137.219 0/0:69:68,1:68:2662:1:40:0,-16.7754,-235.731 0/0:38:38,0:38:1426:0:0:0,-11.4391,-128.588 0/1:35:30,5:30:1192:5:196:-7.47718,0,-97.0187 0/0:31:31,0:31:1232:0:0:0,-9.33193,-111.157 0/0:37:37,0:37:1480:0:0:0,-11.1381,-133.443 dDocent_Contig_8413 92 . C A 250.482 . AB=0.238806;ABP=42.7126;AC=2;AF=0.166667;AN=12;AO=18;CIGAR=1X;DP=167;DPB=167;DPRA=0.964912;EPP=42.0968;EPPR=326.56;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.722222;PAIREDR=0.845638;PAO=0;PQA=0;PQR=0;PRO=0;QA=601;QR=5002;RO=149;RPL=18;RPP=42.0968;RPPR=326.56;RPR=0;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=149;SRP=326.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:13,1:13:425:1:35:0,-0.715791,-35.0665 0/1:31:23,8:23:785:8:264:-14.7508,0,-61.6342 0/1:36:28,8:28:951:8:267:-13.519,0,-75.0624 0/0:29:28,1:28:946:1:35:0,-5.23124,-81.9501 0/0:26:26,0:26:880:0:0:0,-7.82678,-79.5103 0/0:31:31,0:31:1015:0:0:0,-9.33193,-91.6494 dDocent_Contig_8414 8 . T C 6467.09 . AB=0.889831;ABP=314.525;AC=2;AF=0.166667;AN=12;AO=210;CIGAR=1X;DP=294;DPB=294;DPRA=8.13793;EPP=459.02;EPPR=185.414;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8009;QR=3253;RO=84;RPL=0;RPP=459.02;RPPR=185.414;RPR=210;RUN=1;SAF=210;SAP=459.02;SAR=0;SRF=84;SRP=185.414;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:1001:0:0:0,-7.82678,-90.4016 0/0:10:10,0:10:386:0:0:0,-3.0103,-35.0972 0/0:5:5,0:5:195:0:0:0,-1.50515,-17.9242 0/0:17:17,0:17:659:0:0:0,-5.11751,-59.6473 0/1:111:11,100:11:429:100:3836:-311.923,0,-5.55131 0/1:125:15,110:15:583:110:4173:-338.008,0,-15.1843 dDocent_Contig_8415 1 . N G 176.023 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=6.91895;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=0.2;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=177;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=1;SAP=6.91895;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:104:-9.70309,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:38:-3.79727,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_8416 22 . C G 114.42 . AB=0.123711;ABP=122.307;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=290;DPB=290;DPRA=1.35772;EPP=37.7539;EPPR=597.994;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0.656934;PAO=0;PQA=0;PQR=0;PRO=0;QA=641;QR=10749;RO=274;RPL=0;RPP=37.7539;RPPR=597.994;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=274;SRP=597.994;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:47:40,7:40:1525:7:277:-11.1512,0,-123.342 0/0:70:66,4:66:2627:4:162:0,-6.10514,-221.594 0/0:42:42,0:42:1665:0:0:0,-12.6433,-150.085 0/1:50:45,5:45:1750:5:202:-3.51037,0,-142.674 0/0:37:37,0:37:1457:0:0:0,-11.1381,-131.387 0/0:44:44,0:44:1725:0:0:0,-13.2453,-155.481 dDocent_Contig_8417 9 . C T 15321.5 . AB=0.648611;ABP=141.128;AC=7;AF=0.583333;AN=12;AO=509;CIGAR=1X;DP=762;DPB=762;DPRA=0;EPP=1108.29;EPPR=552.393;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=19525;QR=9762;RO=253;RPL=0;RPP=1108.29;RPPR=552.393;RPR=509;RUN=1;SAF=509;SAP=1108.29;SAR=0;SRF=253;SRP=552.393;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:223:59,164:59:2272:164:6289:-498.803,0,-137.568 0/1:260:114,146:114:4388:146:5604:-426.062,0,-316.711 0/1:59:10,49:10:388:49:1847:-148.714,0,-17.5171 0/1:122:49,73:49:1895:73:2817:-216.978,0,-134.067 1/1:42:0,42:0:0:42:1625:-146.514,-12.6433,0 0/1:56:21,35:21:819:35:1343:-104.297,0,-57.177 dDocent_Contig_8418 12 . A C 657.076 . AB=0.6;ABP=3.87889;AC=3;AF=0.25;AN=12;AO=6;CIGAR=1X3M;DP=134;DPB=134;DPRA=0.588235;EPP=16.0391;EPPR=222.329;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.990099;PAO=0;PQA=0;PQR=0;PRO=0;QA=246;QR=3975;RO=101;RPL=0;RPP=16.0391;RPPR=222.329;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=101;SRP=222.329;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:17:17,0,0,0:17:672:0,0,0:0,0,0:0,-5.11751,-60.8089,-5.11751,-60.8089,-60.8089,-5.11751,-60.8089,-60.8089,-60.8089 0|1:14:9,4,0,0:9:362:4,0,0:161,0,0:-10.5535,0,-28.6214,-13.2628,-29.8255,-43.0941,-13.2628,-29.8255,-43.0941,-43.0941 0|1:30:21,6,0,2:21:826:6,0,2:242,0,78:-13.6377,0,-66.1357,-19.9593,-67.9419,-87.8923,-13.5499,-61.5305,-81.481,-80.879 0|0:17:17,0,0,0:17:668:0,0,0:0,0,0:0,-5.11751,-60.4492,-5.11751,-60.4492,-60.4492,-5.11751,-60.4492,-60.4492,-60.4492 0|0:46:34,0,0,12:34:1333:0,0,12:0,0,476:-29.3368,-39.5718,-149.183,-39.5718,-149.183,-149.183,0,-110.006,-110.006,-106.394 0|1:10:3,0,6,1:3:114:0,6,1:0,246,41:-19.4014,-20.3045,-29.6442,0,-9.32637,-7.52019,-16.9204,-26.2592,-5.93485,-25.9581 dDocent_Contig_8419 15 . A C 3389.81 . AB=0.312217;ABP=138.388;AC=6;AF=0.5;AN=12;AO=138;CIGAR=2X;DP=442;DPB=442;DPRA=0;EPP=214.745;EPPR=154.689;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.637681;PAIREDR=0.269103;PAO=0;PQA=0;PQR=0;PRO=0;QA=5343;QR=11478;RO=301;RPL=0;RPP=302.673;RPPR=656.623;RPR=138;RUN=1;SAF=127;SAP=214.745;SAR=11;SRF=223;SRP=154.689;SRR=78;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:78:45,30:45:1718:30:1156:-81.3834,0,-131.921 0|1:82:64,18:64:2430:18:682:-37.0187,0,-194.204 0|1:51:40,11:40:1551:11:434:-24.0595,0,-124.488 0|1:65:45,20:45:1704:20:793:-52.1215,0,-134.034 0|1:76:61,15:61:2335:15:580:-29.6532,0,-187.469 0|1:90:46,44:46:1740:44:1698:-125.966,0,-129.741 dDocent_Contig_8420 50 . G T 367.563 . AB=0.215686;ABP=74.6263;AC=2;AF=0.166667;AN=12;AO=28;CIGAR=1X;DP=309;DPB=309;DPRA=0.985577;EPP=63.8115;EPPR=613.194;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.428571;PAIREDR=0.608541;PAO=0;PQA=0;PQR=0;PRO=0;QA=941;QR=10796;RO=281;RPL=21;RPP=18.2106;RPPR=18.6588;RPR=7;RUN=1;SAF=21;SAP=18.2106;SAR=7;SRF=163;SRP=18.6588;SRR=118;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:33,3:33:1267:3:54:0,-5.7975,-109.268 0/0:67:64,3:64:2440:3:109:0,-10.0017,-209.604 0/1:45:34,11:34:1320:11:414:-24.064,0,-105.531 0/1:57:46,11:46:1788:11:364:-15.9142,0,-143.993 0/0:43:43,0:43:1662:0:0:0,-12.9443,-149.822 0/0:61:61,0:61:2319:0:0:0,-18.3628,-208.886 dDocent_Contig_8421 13 . G A 32.1382 . AB=0.0867679;ABP=686.77;AC=1;AF=0.0833333;AN=12;AO=79;CIGAR=1X;DP=1887;DPB=1887;DPRA=2.65552;EPP=174.557;EPPR=3929.03;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990597;PAO=0;PQA=0;PQR=0;PRO=0;QA=3159;QR=71969;RO=1808;RPL=0;RPP=174.557;RPPR=3929.03;RPR=79;RUN=1;SAF=79;SAP=174.557;SAR=0;SRF=1808;SRP=3929.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:290:273,17:273:10823:17:675:0,-26.2173,-912.265 0/0:298:279,19:279:11041:19:769:0,-20.1764,-923.427 0/0:165:165,0:165:6633:0:0:0,-49.6699,-596.66 0/0:134:134,0:134:5306:0:0:0,-40.338,-477.4 0/0:539:536,3:536:21415:3:123:0,-150.79,-1914.06 0/1:461:421,40:421:16751:40:1592:-4.73644,0,-1367.48 dDocent_Contig_8422 28 . A C 239.991 . AB=0.19697;ABP=55.6521;AC=2;AF=0.166667;AN=12;AO=19;CIGAR=1X;DP=470;DPB=470;DPRA=0.41994;EPP=44.2683;EPPR=982.344;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.973392;PAO=0;PQA=0;PQR=0;PRO=0;QA=749;QR=17253;RO=451;RPL=0;RPP=44.2683;RPPR=982.344;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=451;SRP=982.344;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:98:98,0:98:3773:0:0:0,-29.5009,-339.656 0/0:131:131,0:131:5023:0:0:0,-39.4349,-452.054 0/0:73:67,6:67:2528:6:234:0,-0.549468,-206.286 0/0:102:102,0:102:3893:0:0:0,-30.7051,-350.455 0/1:40:33,7:33:1254:7:272:-12.7994,0,-101.103 0/1:26:20,6:20:782:6:243:-14.4214,0,-62.8713 dDocent_Contig_8423 147 . A G 2492.15 . AB=0.614815;ABP=18.468;AC=6;AF=0.5;AN=12;AO=83;CIGAR=1X;DP=135;DPB=135;DPRA=0;EPP=183.243;EPPR=115.927;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.2308;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.686747;PAIREDR=0.75;PAO=0;PQA=0;PQR=0;PRO=0;QA=3306;QR=2090;RO=52;RPL=83;RPP=183.243;RPPR=115.927;RPR=0;RUN=1;SAF=0;SAP=183.243;SAR=83;SRF=0;SRP=115.927;SRR=52;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:1,11:1:41:11:445:-36.7928,0,-0.482207 0/1:33:10,23:10:395:23:934:-74.4276,0,-25.9709 0/1:16:10,6:10:410:6:240:-17.1586,0,-32.4441 0/1:22:11,11:11:437:11:408:-30.4274,0,-31.1529 0/1:20:9,11:9:363:11:423:-32.3944,0,-27.013 0/1:32:11,21:11:444:21:856:-67.7159,0,-30.6817 dDocent_Contig_8424 18 . C G 121.713 . AB=0.111888;ABP=190.106;AC=1;AF=0.0833333;AN=12;AO=34;CIGAR=1X;DP=846;DPB=846;DPRA=2.33893;EPP=76.8404;EPPR=1759.73;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.708282;PAO=0;PQA=0;PQR=0;PRO=0;QA=1351;QR=31295;RO=809;RPL=0;RPP=76.8404;RPPR=1759.73;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=809;SRP=1759.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:255:247,7:247:9520:7:275:0,-51.7418,-831.186 0/0:154:150,4:150:5771:4:162:0,-31.3917,-504.282 0/0:145:137,7:137:5351:7:286:0,-17.6428,-455.343 0/1:143:126,16:126:4801:16:628:-13.6942,0,-388.908 0/0:78:78,0:78:3077:0:0:0,-23.4803,-277.028 0/0:71:71,0:71:2775:0:0:0,-21.3731,-249.888 dDocent_Contig_8425 25 . C A 7317.93 . AB=0.204413;ABP=1309.83;AC=5;AF=0.416667;AN=12;AO=393;CIGAR=1X;DP=2471;DPB=2471;DPRA=0;EPP=856.399;EPPR=4513.16;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=59.9961;NS=6;NUMALT=1;ODDS=0;PAIRED=0.913486;PAIREDR=0.997593;PAO=0;PQA=0;PQR=0;PRO=0;QA=15621;QR=82513;RO=2077;RPL=0;RPP=856.399;RPPR=4513.16;RPR=393;RUN=1;SAF=393;SAP=856.399;SAR=0;SRF=2077;SRP=4513.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:366:299,67:299:11859:67:2658:-129.168,0,-956.33 0/1:278:200,78:200:7881:78:3119:-197.103,0,-625.197 0/1:242:187,55:187:7440:55:2183:-123.794,0,-596.38 0/1:432:342,90:342:13587:90:3578:-192.012,0,-1091.77 0/0:749:708,41:708:28181:41:1633:0,-78.2677,-2386.6 0/1:404:341,62:341:13565:62:2450:-98.939,0,-1098.15 dDocent_Contig_8426 22 . C A 129.892 . AB=0.230769;ABP=19.3799;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=167;DPB=167;DPRA=0.921986;EPP=16.0391;EPPR=352.617;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.869565;PAO=0;PQA=0;PQR=0;PRO=0;QA=244;QR=6439;RO=161;RPL=0;RPP=16.0391;RPPR=352.617;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=161;SRP=352.617;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:869:0:0:0,-6.62266,-78.5219 0/0:42:42,0:42:1665:0:0:0,-12.6433,-150.067 0/0:35:35,0:35:1407:0:0:0,-10.536,-126.883 0/0:19:19,0:19:769:0:0:0,-5.71957,-69.5307 0/1:26:20,6:20:809:6:244:-14.512,0,-65.2996 0/0:23:23,0:23:920:0:0:0,-6.92369,-83.1029 dDocent_Contig_8427 7 . C A 1334.49 . AB=0.404762;ABP=12.937;AC=3;AF=0.25;AN=12;AO=52;CIGAR=1X;DP=218;DPB=218;DPRA=1.59615;EPP=115.927;EPPR=363.475;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.673077;PAIREDR=0.560241;PAO=0;PQA=0;PQR=0;PRO=0;QA=1990;QR=6380;RO=166;RPL=0;RPP=115.927;RPPR=363.475;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=166;SRP=363.475;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:27:20,7:20:768:7:269:-16.4468,0,-61.3199 0/0:34:34,0:34:1310:0:0:0,-10.235,-118.188 0/0:18:18,0:18:692:0:0:0,-5.41854,-62.6128 0/0:40:39,1:39:1493:1:39:0,-8.14463,-130.748 0/1:53:27,26:27:1045:26:990:-73.4573,0,-78.4032 0/1:46:28,18:28:1072:18:692:-48.7669,0,-82.9375 dDocent_Contig_8428 35 . G A 1176.22 . AB=0.396396;ABP=13.359;AC=3;AF=0.25;AN=12;AO=44;CIGAR=1X;DP=201;DPB=201;DPRA=1.23333;EPP=98.5551;EPPR=343.931;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1725;QR=6212;RO=157;RPL=0;RPP=98.5551;RPPR=343.931;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=157;SRP=343.931;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:29:4,25:4:141:25:973:-79.1333,0,-4.29753 0/1:40:33,7:33:1332:7:272:-12.8024,0,-108.099 0/1:42:30,12:30:1191:12:480:-30.9079,0,-94.8233 0/0:51:51,0:51:2007:0:0:0,-15.3525,-180.826 0/0:8:8,0:8:321:0:0:0,-2.40824,-29.2574 0/0:31:31,0:31:1220:0:0:0,-9.33193,-110.063 dDocent_Contig_8429 163 . C T 810.505 . AB=0.364706;ABP=16.5245;AC=2;AF=0.2;AN=10;AO=31;CIGAR=1X;DP=617;DPB=617;DPRA=0.239662;EPP=70.3259;EPPR=1223.91;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1214;QR=22709;RO=586;RPL=31;RPP=70.3259;RPPR=1223.91;RPR=0;RUN=1;SAF=0;SAP=70.3259;SAR=31;SRF=0;SRP=1275.49;SRR=586;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:39:32,7:32:1239:7:281:-13.9224,0,-100.04 ./.:.:.:.:.:.:.:. 0/0:13:13,0:13:511:0:0:0,-3.91339,-46.3364 0/1:46:22,24:22:843:24:933:-70.4292,0,-62.3302 0/0:309:309,0:309:12015:0:0:0,-93.0183,-1080.65 0/0:210:210,0:210:8101:0:0:0,-63.2163,-728.753 dDocent_Contig_8430 68 . T C 3428.33 . AB=0.158046;ABP=356.461;AC=1;AF=0.0833333;AN=12;AO=55;CIGAR=8M1X3M;DP=800;DPB=777.167;DPRA=11.6;EPP=122.441;EPPR=1249.44;GTI=0;LEN=1;MEANALT=6.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2178;QR=22346;RO=574;RPL=55;RPP=122.441;RPPR=1249.44;RPR=0;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=574;SRP=1249.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:106:83,0,23,0:83:3245:0,23,0:0,900,0:-49.401,-74.3865,-341.168,0,-267.172,-260.249,-74.3865,-341.168,-267.172,-341.168 0|0:181:126,14,25,11:126:4899:14,25,11:533,963,437:-41.1297,-35.3454,-433.713,0,-358.879,-395.064,-43.0786,-401.952,-366.614,-442.352 0|0:180:141,20,15,0:141:5536:20,15,0:797,575,0:-23.1984,0,-449.303,-18.4608,-408.141,-469.256,-65.6436,-455.324,-473.771,-520.954 0|0:151:95,6,49,0:95:3656:6,49,0:241,1924,0:-129.642,-138.379,-436.71,0,-280.285,-285.395,-158.239,-438.517,-300.145,-458.376 0|0:15:14,0,0,0:14:541:0,0,0:0,0,0:0,-4.21442,-48.9317,-4.21442,-48.9317,-48.9317,-4.21442,-48.9317,-48.9317,-48.9317 0|1:167:115,0,3,44:115:4469:0,3,44:0,120,1741:-108.684,-143.303,-510.513,-133.417,-500.628,-499.725,0,-367.254,-357.368,-354.008 dDocent_Contig_8431 18 . C T 251.122 . AB=0.151786;ABP=120.968;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=1X;DP=675;DPB=675;DPRA=1.125;EPP=57.2971;EPPR=1407.95;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.92;PAIREDR=0.970634;PAO=0;PQA=0;PQR=0;PRO=0;QA=969;QR=25165;RO=647;RPL=0;RPP=57.2971;RPPR=1407.95;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=647;SRP=1407.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:113:112,0:112:4316:0:0:0,-33.7154,-388.342 0/0:131:123,8:123:4771:8:304:0,-11.7178,-401.626 0/0:90:90,0:90:3482:0:0:0,-27.0927,-313.45 0/1:112:94,17:94:3671:17:665:-26.6351,0,-296.9 0/0:132:131,0:131:5084:0:0:0,-39.4349,-457.206 0/0:97:97,0:97:3841:0:0:0,-29.1999,-345.716 dDocent_Contig_8432 58 . T C 56.594 . AB=0.214286;ABP=12.937;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=162;DPB=162;DPRA=0.951807;EPP=18.2106;EPPR=337.417;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=261;QR=5635;RO=154;RPL=7;RPP=18.2106;RPPR=337.417;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=154;SRP=337.417;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:14:11,3:11:414:3:119:-6.88097,0,-33.3954 0/0:27:27,0:27:990:0:0:0,-8.12781,-89.4074 0/0:26:24,2:24:866:2:78:0,-0.423479,-70.8482 0/0:39:36,2:36:1345:2:64:0,-5.72229,-115.234 0/0:39:39,0:39:1415:0:0:0,-11.7402,-127.622 0/0:17:17,0:17:605:0:0:0,-5.11751,-54.7723 dDocent_Contig_8433 74 . A G 188.831 . AB=0.192308;ABP=67.1523;AC=4;AF=0.333333;AN=12;AO=20;CIGAR=1X;DP=386;DPB=386;DPRA=0;EPP=46.4397;EPPR=795.598;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.958904;PAO=0;PQA=0;PQR=0;PRO=0;QA=683;QR=13034;RO=365;RPL=20;RPP=46.4397;RPPR=795.598;RPR=0;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=365;SRP=795.598;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:15,4:15:543:4:141:-7.31681,0,-43.4871 0/1:6:2,4:2:68:4:137:-10.8608,0,-4.65124 0/1:11:8,3:8:298:3:99:-5.92449,0,-23.8642 0/1:42:38,4:38:1318:4:143:-0.577829,0,-106.269 0/0:157:153,4:153:5445:4:148:0,-33.5797,-476.484 0/0:151:149,1:149:5362:1:15:0,-43.7695,-481.223 dDocent_Contig_8434 8 . T G 428.236 . AB=0.25641;ABP=43.2104;AC=1;AF=0.0833333;AN=12;AO=30;CIGAR=1X;DP=1403;DPB=1403;DPRA=1.00107;EPP=68.1545;EPPR=2982.27;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999271;PAO=0;PQA=0;PQR=0;PRO=0;QA=1124;QR=52643;RO=1372;RPL=0;RPP=68.1545;RPPR=2982.27;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=1372;SRP=2982.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:390:380,10:380:14584:10:374:0,-83.392,-1277.86 0/0:282:282,0:282:10756:0:0:0,-84.8905,-967.638 0/0:189:189,0:189:7295:0:0:0,-56.8947,-656.387 0/0:311:310,0:310:11916:0:0:0,-93.3193,-1071.55 0/1:78:58,20:58:2216:20:750:-44.3465,0,-176.183 0/0:153:153,0:153:5876:0:0:0,-46.0576,-528.792 dDocent_Contig_8435 11 . C T 250.879 . AB=0.130178;ABP=203.775;AC=2;AF=0.166667;AN=12;AO=28;CIGAR=1X;DP=446;DPB=446;DPRA=0.929114;EPP=63.8115;EPPR=910.686;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1097;QR=16049;RO=418;RPL=0;RPP=63.8115;RPPR=910.686;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=418;SRP=910.686;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:108:106,2:106:4030:2:80:0,-24.9194,-355.171 0/1:110:100,10:100:3821:10:377:-1.1652,0,-310.844 0/0:40:39,1:39:1528:1:32:0,-8.84189,-134.573 0/1:59:47,12:47:1780:12:489:-26.6003,0,-142.675 0/0:50:47,3:47:1825:3:119:0,-3.95649,-153.393 0/0:79:79,0:79:3065:0:0:0,-23.7814,-275.981 dDocent_Contig_8436 19 . A T 591.676 . AB=0.184;ABP=111.428;AC=2;AF=0.166667;AN=12;AO=27;CIGAR=3M1X1M;DP=254;DPB=252;DPRA=0;EPP=61.6401;EPPR=467.705;GTI=0;LEN=1;MEANALT=1.8;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.444444;PAIREDR=0.406542;PAO=0;PQA=0;PQR=0;PRO=0;QA=1090;QR=8503;RO=214;RPL=0;RPP=61.6401;RPPR=467.705;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=214;SRP=467.705;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:47:44,0,2:44:1721:0,2:0,82:0,-13.2453,-154.72,-6.47716,-147.951,-147.349 0|1:80:72,0,8:72:2859:0,8:0,328:-5.80794,-27.4821,-262.831,0,-235.757,-233.349 0|0:26:25,0,1:25:999:0,1:0,41:0,-7.52575,-89.8019,-3.73221,-86.4174,-86.1164 0|1:45:29,0,15:29:1157:0,15:0,598:-40.5042,-49.2341,-144.519,0,-95.2747,-90.7593 0|0:27:23,2,1:23:926:2,1:75,41:0,-0.796539,-76.5118,-3.53299,-73.7295,-79.5684 0|0:29:21,8,0:21:841:8,0:294,0:-18.0772,0,-67.2763,-24.3988,-69.6846,-93.7071 dDocent_Contig_8437 9 . A G 127.835 . AB=0.163636;ABP=57.0602;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=585;DPB=585;DPRA=0.783537;EPP=35.5824;EPPR=1238.58;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.873462;PAO=0;PQA=0;PQR=0;PRO=0;QA=570;QR=21741;RO=569;RPL=0;RPP=35.5824;RPPR=1238.58;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=569;SRP=1238.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:92:88,4:88:3354:4:156:0,-13.2775,-287.591 0/0:121:121,0:121:4620:0:0:0,-36.4246,-415.845 0/1:55:46,9:46:1763:9:339:-14.3064,0,-142.369 0/0:110:108,2:108:4113:2:75:0,-25.993,-363.135 0/0:102:102,0:102:3914:0:0:0,-30.7051,-352.357 0/0:105:104,0:104:3977:0:0:0,-31.3071,-357.636 dDocent_Contig_8438 34 . A T 1563.48 . AB=0.262948;ABP=125.521;AC=4;AF=0.333333;AN=12;AO=68;CIGAR=5M1X4M;DP=388;DPB=387.6;DPRA=0.807792;EPP=150.67;EPPR=689.196;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=0.617647;PAIREDR=0.686709;PAO=0;PQA=0;PQR=0;PRO=0;QA=2714;QR=12308;RO=316;RPL=0;RPP=150.67;RPPR=689.196;RPR=68;RUN=1;SAF=68;SAP=150.67;SAR=0;SRF=316;SRP=689.196;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:58:33,4,21:33:1298:4,21:142,824:-57.8484,-56.2186,-161.788,0,-95.2415,-100.485 0|1:83:62,0,21:62:2425:0,21:0,848:-51.6459,-70.3098,-269.68,0,-199.77,-193.448 0|1:61:50,0,11:50:1936:0,11:0,434:-21.049,-36.1005,-195.124,0,-159.416,-156.105 0|1:49:36,0,13:36:1395:0,13:0,527:-33.0263,-43.8634,-158.444,0,-114.981,-111.067 0|0:77:77,0,0:77:2981:0,0:0,0:0,-23.1793,-268.436,-23.1793,-268.436,-268.436 0|0:60:58,0,2:58:2273:0,2:0,81:0,-17.4597,-204.364,-10.3761,-197.684,-197.082 dDocent_Contig_8439 11 . A G 1164.73 . AB=0.345324;ABP=31.8956;AC=6;AF=0.5;AN=12;AO=48;CIGAR=3X;DP=139;DPB=139;DPRA=0;EPP=107.241;EPPR=198.443;GTI=0;LEN=1;MEANALT=1.16667;MQM=56.9167;MQMR=59.7667;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.977778;PAO=0;PQA=0;PQR=0;PRO=0;QA=1863;QR=3558;RO=90;RPL=0;RPP=107.241;RPPR=198.443;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=90;SRP=198.443;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:19:13,6:13:522:6:230:-15.3019,0,-41.608 0|1:17:15,2:15:595:2:78:-2.28596,0,-48.7253 0|1:20:14,6:14:550:6:236:-15.548,0,-43.8206 0|1:20:16,3:16:614:3:119:-4.95211,0,-49.4673 0|1:45:22,23:22:871:23:891:-66.8538,0,-65.1523 0|1:18:10,8:10:406:8:309:-22.7171,0,-31.4819 dDocent_Contig_8440 9 . A T 730.698 . AB=0.0578035;ABP=296.837;AC=0;AF=0;AN=12;AO=10;CIGAR=1X2M1X4M1D6M1X;DP=235;DPB=230.625;DPRA=0;EPP=24.725;EPPR=352.617;GTI=0;LEN=1;MEANALT=3.8;MQM=37.3;MQMR=60;NS=6;NUMALT=6;ODDS=2.77556e-17;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=1.66667;PRO=0.166667;QA=353;QR=6329;RO=161;RPL=0;RPP=24.725;RPPR=352.617;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=161;SRP=352.617;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:19:9,1,0,0,0,8,0:9:351:1,0,0,0,8,0:25,0,0,0,290,0:-20.1171,-20.9067,-49.4777,-22.8264,-49.7787,-51.7022,-22.8264,-49.7787,-51.7022,-51.7022,-22.8264,-49.7787,-51.7022,-51.7022,-51.7022,0,-27.009,-28.9264,-28.9264,-28.9264,-26.5181,-22.8264,-49.7787,-51.7022,-51.7022,-51.7022,-28.9264,-51.7022 0|0:55:34,5,5,3,0,7,1:34:1344:5,5,3,0,7,1:176,197,90,0,272,38:-11.6565,-8.693,-117.813,-6.27918,-103.715,-115.411,-15.5204,-112.941,-110.538,-125.238,-21.8915,-119.318,-116.916,-126.141,-132.519,0,-97.4417,-95.0383,-104.264,-110.642,-108.535,-18.7833,-116.212,-113.809,-123.034,-129.413,-107.535,-129.112 0|0:18:9,1,0,0,0,5,2:9:353:1,0,0,0,5,2:38,0,0,0,199,80:-13.6284,-13.4946,-42.2221,-16.3377,-42.5232,-45.3688,-16.3377,-42.5232,-45.3688,-45.3688,-16.3377,-42.5232,-45.3688,-45.3688,-45.3688,0,-26.1919,-29.0367,-29.0367,-29.0367,-27.5315,-9.77578,-35.9629,-38.8083,-38.8083,-38.8083,-22.4754,-38.2062 0|0:13:9,1,0,0,0,2,0:9:355:1,0,0,0,2,0:38,0,0,0,72,0:-3.14315,-3.01085,-31.9327,-5.85242,-32.2337,-35.0787,-5.85242,-32.2337,-35.0787,-35.0787,-5.85242,-32.2337,-35.0787,-35.0787,-35.0787,0,-26.3771,-29.221,-29.221,-29.221,-28.619,-5.85242,-32.2337,-35.0787,-35.0787,-35.0787,-29.221,-35.0787 0|0:62:45,0,0,0,0,15,0:45:1759:0,0,0,0,15,0:0,0,0,0,585,0:-33.6778,-47.2241,-191.842,-47.2241,-191.842,-191.842,-47.2241,-191.842,-191.842,-191.842,-47.2241,-191.842,-191.842,-191.842,-191.842,0,-144.613,-144.613,-144.613,-144.613,-140.097,-47.2241,-191.842,-191.842,-191.842,-191.842,-144.613,-191.842 0|0:68:55,2,0,0,4,6,0:55:2167:2,0,0,4,6,0:76,0,0,162,228,0:-1.98078,-12.843,-190.55,-18.5374,-191.152,-196.847,-18.5374,-191.152,-196.847,-196.847,-5.21083,-177.844,-183.539,-183.539,-182.335,0,-172.63,-178.325,-178.325,-165.017,-176.519,-18.5374,-191.152,-196.847,-196.847,-183.539,-178.325,-196.847 dDocent_Contig_8443 31 . G A 10238.9 . AB=0.749288;ABP=192.473;AC=7;AF=0.583333;AN=12;AO=316;CIGAR=1X2M;DP=404;DPB=404;DPRA=0;EPP=689.196;EPPR=176.728;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.996835;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=12624;QR=3081;RO=80;RPL=0;RPP=689.196;RPPR=176.728;RPR=316;RUN=1;SAF=316;SAP=689.196;SAR=0;SRF=80;SRP=176.728;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:74:18,1,55:18:695:1,55:40,2188:-174.725,-176.849,-233.62,0,-53.7659,-40.505 0|1:66:8,6,52:8:317:6,52:237,2073:-168.303,-151.209,-175.495,0,-6.59194,-10.4402 0|1:55:23,0,32:23:886:0,32:0,1290:-99.8091,-106.733,-179.473,0,-73.1321,-63.4991 0|1:53:19,0,34:19:730:0,34:0,1372:-107.781,-113.5,-173.418,0,-60.3082,-50.0731 1|1:53:0,0,53:0:0:0,53:0,2088:-188.099,-188.099,-188.099,-15.9546,-15.9546,0 0|1:103:12,0,90:12:453:0,90:0,3613:-294.394,-298.006,-335.125,0,-37.3864,-10.2937 dDocent_Contig_8444 21 . A T 317.998 . AB=0.16;ABP=128.521;AC=4;AF=0.333333;AN=12;AO=20;CIGAR=1X;DP=197;DPB=197;DPRA=0.868056;EPP=46.4397;EPPR=387.361;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.6;PAIREDR=0.536723;PAO=0;PQA=0;PQR=0;PRO=0;QA=815;QR=7069;RO=177;RPL=0;RPP=46.4397;RPPR=387.361;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=177;SRP=387.361;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:34,3:34:1361:3:122:-0.234383,0,-111.611 0/1:34:26,8:26:1040:8:327:-19.5651,0,-83.6562 0/1:26:21,5:21:843:5:204:-10.9173,0,-68.3569 0/1:28:24,4:24:948:4:162:-6.53812,0,-77.1928 0/0:29:29,0:29:1158:0:0:0,-8.72987,-104.499 0/0:43:43,0:43:1719:0:0:0,-12.9443,-154.93 dDocent_Contig_8445 15 . A G 1145.68 . AB=0.354839;ABP=25.7057;AC=5;AF=0.416667;AN=12;AO=44;CIGAR=1X;DP=135;DPB=135;DPRA=2.25455;EPP=98.5551;EPPR=200.614;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1770;QR=3628;RO=91;RPL=0;RPP=98.5551;RPPR=200.614;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=91;SRP=200.614;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:10,9:10:400:9:364:-27.4048,0,-30.6388 0/1:34:19,15:19:752:15:599:-44.0123,0,-57.7638 0/1:37:26,11:26:1051:11:449:-29.6276,0,-83.7418 0/1:21:16,5:16:636:5:194:-11.5084,0,-51.2479 0/0:11:11,0:11:429:0:0:0,-3.31133,-38.9554 0/1:13:9,4:9:360:4:164:-11.2365,0,-28.848 dDocent_Contig_8446 31 . G A 380.524 . AB=0.140845;ABP=241.658;AC=1;AF=0.0833333;AN=12;AO=45;CIGAR=1X;DP=1049;DPB=1049;DPRA=1.45066;EPP=100.727;EPPR=2183.17;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.982072;PAO=0;PQA=0;PQR=0;PRO=0;QA=1731;QR=39464;RO=1004;RPL=0;RPP=100.727;RPPR=2183.17;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=1004;SRP=2183.17;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:157:157,0:157:6103:0:0:0,-47.2617,-549.076 0/0:166:166,0:166:6550:0:0:0,-49.971,-589.254 0/0:102:102,0:102:4010:0:0:0,-30.7051,-360.903 0/0:183:183,0:183:7184:0:0:0,-55.0885,-646.232 0/1:213:183,30:183:7191:30:1149:-39.5753,0,-582.736 0/0:228:213,15:213:8426:15:582:0,-15.9188,-705.182 dDocent_Contig_8447 23 . C T 121.009 . AB=0.147541;ABP=68.8308;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=144;DPB=144;DPRA=1.88;EPP=26.8965;EPPR=291.816;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=446;QR=5328;RO=133;RPL=0;RPP=26.8965;RPPR=291.816;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=133;SRP=291.816;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:31,2:31:1243:2:81:0,-2.24826,-104.454 0/0:32:32,0:32:1286:0:0:0,-9.63296,-116.003 0/1:20:18,2:18:705:2:81:-1.66513,0,-57.7451 0/1:41:34,7:34:1367:7:284:-13.5916,0,-110.94 0/0:9:9,0:9:365:0:0:0,-2.70927,-33.2145 0/0:9:9,0:9:362:0:0:0,-2.70927,-32.944 dDocent_Contig_8449 11 . A C 11075 . AB=0;ABP=0;AC=4;AF=0.333333;AN=12;AO=311;CIGAR=1X;DP=530;DPB=530;DPRA=2.95327;EPP=678.338;EPPR=478.563;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=12501;QR=8707;RO=219;RPL=0;RPP=678.338;RPPR=478.563;RPR=311;RUN=1;SAF=311;SAP=678.338;SAR=0;SRF=219;SRP=478.563;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1637:0:0:0,-12.3422,-147.563 0/0:49:49,0:49:1955:0:0:0,-14.7505,-176.155 0/0:67:67,0:67:2664:0:0:0,-20.169,-239.888 0/0:57:57,0:57:2257:0:0:0,-17.1587,-203.302 1/1:198:0,198:0:0:198:7958:-715.766,-59.6039,0 1/1:118:5,113:5:194:113:4543:-390.955,-17.691,0 dDocent_Contig_8450 13 . C G 1021.09 . AB=0.154589;ABP=432.039;AC=3;AF=0.25;AN=12;AO=73;CIGAR=1X;DP=850;DPB=850;DPRA=1.71354;EPP=161.528;EPPR=1688.07;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2925;QR=30741;RO=776;RPL=0;RPP=161.528;RPPR=1688.07;RPR=73;RUN=1;SAF=73;SAP=161.528;SAR=0;SRF=776;SRP=1688.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:244:234,9:234:9338:9:358:0,-40.9491,-807.271 0/1:196:174,22:174:6951:22:879:-20.4144,0,-566.273 0/1:130:113,17:113:4387:17:685:-22.8433,0,-355.639 0/0:130:130,0:130:5141:0:0:0,-39.1339,-462.56 0/1:88:63,25:63:2493:25:1003:-64.0734,0,-198.027 0/0:62:62,0:62:2431:0:0:0,-18.6639,-218.939 dDocent_Contig_8451 7 . C T 253.788 . AB=0.314286;ABP=13.4954;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=201;DPB=201;DPRA=0.421687;EPP=26.8965;EPPR=415.59;GTI=0;LEN=1;MEANALT=1;MQM=57;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.952632;PAO=0;PQA=0;PQR=0;PRO=0;QA=427;QR=7312;RO=190;RPL=0;RPP=26.8965;RPPR=415.59;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=190;SRP=415.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:47:47,0:47:1807:0:0:0,-14.1484,-162.883 0/0:48:48,0:48:1830:0:0:0,-14.4494,-164.948 0/0:9:9,0:9:348:0:0:0,-2.70927,-31.6803 0/0:62:62,0:62:2408:0:0:0,-18.6639,-216.922 0/1:15:12,3:12:451:3:115:-6.2011,0,-36.4198 0/1:20:12,8:12:468:8:312:-22.3996,0,-36.452 dDocent_Contig_8453 131 . A G 2921.4 . AB=0.556604;ABP=8.91015;AC=6;AF=0.5;AN=12;AO=118;CIGAR=1X5M;DP=212;DPB=212;DPRA=0;EPP=259.244;EPPR=181.071;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.830508;PAIREDR=0.853659;PAO=0;PQA=0;PQR=0;PRO=0;QA=4034;QR=2874;RO=82;RPL=0;RPP=259.244;RPPR=181.071;RPR=118;RUN=1;SAF=0;SAP=259.244;SAR=118;SRF=0;SRP=181.071;SRR=82;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:14:6,0,8:6:213:0,8:0,273:-20.6881,-22.4943,-39.8556,0,-17.7102,-15.302 0|1:29:8,1,20:8:284:1,20:35,694:-54.005,-53.5654,-76.4072,0,-20.2978,-17.1244 0|1:23:14,1,8:14:494:1,8:35,261:-16.8383,-18.2024,-58.1449,0,-37.3817,-37.821 0|1:43:26,0,16:26:908:0,16:0,545:-36.3709,-44.1976,-118.062,0,-73.8497,-69.0332 0|1:60:14,9,37:14:483:9,37:311,1267:-98.6341,-77.5773,-114.108,0,-13.9682,-28.1008 0|1:43:14,0,29:14:492:0,29:0,994:-76.8256,-81.04,-121.089,0,-40.3977,-31.6678 dDocent_Contig_8454 27 . T C 89.6625 . AB=0.100592;ABP=237.182;AC=2;AF=0.166667;AN=12;AO=21;CIGAR=1X;DP=495;DPB=495;DPRA=0.882682;EPP=48.6112;EPPR=1032.29;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.981013;PAO=0;PQA=0;PQR=0;PRO=0;QA=838;QR=18629;RO=474;RPL=0;RPP=48.6112;RPPR=1032.29;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=474;SRP=1032.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:75:74,1:74:2892:1:38:0,-18.78,-256.618 0/0:72:69,3:69:2689:3:122:0,-10.3017,-230.786 0/1:74:65,9:65:2593:9:360:-10.4874,0,-211.237 0/1:95:87,8:87:3439:8:318:-0.389146,0,-280.984 0/0:77:77,0:77:3009:0:0:0,-23.1793,-270.937 0/0:102:102,0:102:4007:0:0:0,-30.7051,-360.654 dDocent_Contig_8455 30 . A G 1138.94 . AB=0.157205;ABP=470.474;AC=5;AF=0.416667;AN=12;AO=73;CIGAR=1X;DP=527;DPB=527;DPRA=0;EPP=161.528;EPPR=988.859;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.931507;PAIREDR=0.960352;PAO=0;PQA=0;PQR=0;PRO=0;QA=2922;QR=18055;RO=454;RPL=0;RPP=161.528;RPPR=988.859;RPR=73;RUN=1;SAF=73;SAP=161.528;SAR=0;SRF=454;SRP=988.859;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:69:68,1:68:2690:1:41:0,-16.6765,-238.124 0/1:116:100,16:100:3984:16:641:-23.1045,0,-323.633 0/1:95:83,12:83:3323:12:490:-15.8533,0,-270.526 0/1:67:55,12:55:2180:12:489:-24.1921,0,-176.212 0/1:85:67,18:67:2672:18:706:-38.2721,0,-215.015 0/1:95:81,14:81:3206:14:555:-21.6936,0,-260.015 dDocent_Contig_8456 56 . A C 280.746 . AB=0.138889;ABP=166.112;AC=1;AF=0.0833333;AN=12;AO=24;CIGAR=1X;DP=697;DPB=697;DPRA=1.58355;EPP=55.1256;EPPR=1460.07;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9791;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.967213;PAO=0;PQA=0;PQR=0;PRO=0;QA=966;QR=26586;RO=671;RPL=24;RPP=55.1256;RPPR=1460.07;RPR=0;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=671;SRP=1460.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:93:93,0:93:3684:0:0:0,-27.9958,-331.593 0/0:139:138,0:138:5436:0:0:0,-41.5421,-488.711 0/0:57:57,0:57:2267:0:0:0,-17.1587,-204.193 0/0:100:99,0:99:3952:0:0:0,-29.802,-355.277 0/1:144:124,20:124:4906:20:807:-29.5975,0,-398.088 0/0:164:160,4:160:6341:4:159:0,-34.6775,-555.754 dDocent_Contig_8457 19 . G T 33.9361 . AB=0.119048;ABP=55.9529;AC=2;AF=0.166667;AN=12;AO=5;CIGAR=1X;DP=118;DPB=118;DPRA=1.10526;EPP=13.8677;EPPR=248.387;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.982301;PAO=0;PQA=0;PQR=0;PRO=0;QA=205;QR=4508;RO=113;RPL=0;RPP=13.8677;RPPR=248.387;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=113;SRP=248.387;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:1006:0:0:0,-7.52575,-90.8334 0/0:19:19,0:19:766:0:0:0,-5.71957,-69.2613 0/1:13:11,2:11:442:2:82:-3.86629,0,-36.2224 0/1:29:26,3:26:1024:3:123:-2.73492,0,-83.7168 0/0:23:23,0:23:914:0:0:0,-6.92369,-82.5651 0/0:9:9,0:9:356:0:0:0,-2.70927,-32.3985 dDocent_Contig_8458 23 . C T 1152.53 . AB=0.397727;ABP=11.0053;AC=5;AF=0.416667;AN=12;AO=40;CIGAR=1X;DP=117;DPB=117;DPRA=1.9375;EPP=89.8692;EPPR=170.214;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1617;QR=3082;RO=77;RPL=0;RPP=89.8692;RPPR=170.214;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=77;SRP=170.214;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:483:0:0:0,-3.61236,-43.8213 0/1:53:39,14:39:1556:14:567:-35.4177,0,-124.321 0/1:17:7,10:7:274:10:402:-31.4218,0,-19.9071 0/1:18:7,11:7:282:11:449:-35.3473,0,-20.3329 0/0:12:12,0:12:487:0:0:0,-3.61236,-44.1815 1/1:5:0,5:0:0:5:199:-18.2878,-1.50515,0 dDocent_Contig_8459 23 . T A 1603.21 . AB=0.244828;ABP=167.024;AC=5;AF=0.416667;AN=12;AO=77;CIGAR=1X;DP=372;DPB=372;DPRA=0;EPP=170.214;EPPR=643.595;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.909091;PAIREDR=0.789831;PAO=0;PQA=0;PQR=0;PRO=0;QA=3073;QR=11598;RO=295;RPL=0;RPP=170.214;RPPR=643.595;RPR=77;RUN=1;SAF=77;SAP=170.214;SAR=0;SRF=295;SRP=643.595;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:42,12:42:1657:12:485:-27.7464,0,-133.112 0/0:82:76,6:76:2968:6:238:0,-2.89081,-245.441 0/1:72:62,10:62:2489:10:402:-14.8648,0,-202.477 0/1:42:37,5:37:1433:5:189:-4.72462,0,-116.588 0/1:59:37,22:37:1413:22:874:-61.212,0,-109.658 0/1:63:41,22:41:1638:22:885:-60.995,0,-128.689 dDocent_Contig_8460 36 . T C 177.773 . AB=0.130435;ABP=166.72;AC=2;AF=0.166667;AN=12;AO=18;CIGAR=1X;DP=364;DPB=364;DPRA=1.22124;EPP=4.9405;EPPR=47.2933;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.555556;PAIREDR=0.436416;PAO=0;PQA=0;PQR=0;PRO=0;QA=687;QR=13001;RO=346;RPL=0;RPP=42.0968;RPPR=754.34;RPR=18;RUN=1;SAF=11;SAP=4.9405;SAR=7;SRF=215;SRP=47.2933;SRR=131;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:59,0:59:2243:0:0:0,-17.7608,-202.064 0/0:36:36,0:36:1292:0:0:0,-10.8371,-116.54 0/0:40:40,0:40:1496:0:0:0,-12.0412,-134.901 0/0:91:91,0:91:3441:0:0:0,-27.3937,-309.789 0/1:48:43,5:43:1611:5:190:-3.01453,0,-130.798 0/1:90:77,13:77:2918:13:497:-17.9776,0,-235.676 dDocent_Contig_8461 13 . T G 1789.42 . AB=0.212042;ABP=278.139;AC=4;AF=0.333333;AN=12;AO=85;CIGAR=1M2I1X;DP=552;DPB=637;DPRA=0;EPP=187.585;EPPR=978.001;GTI=0;LEN=1;MEANALT=2;MQM=56.3294;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.847059;PAIREDR=0.554566;PAO=0;PQA=0;PQR=0;PRO=0;QA=3365;QR=17983;RO=449;RPL=0;RPP=187.585;RPPR=978.001;RPR=85;RUN=1;SAF=85;SAP=187.585;SAR=0;SRF=449;SRP=978.001;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:77:61,15,1:61:2438:15,1:599,10:-29.7148,0,-196.582,-47.4967,-200.503,-248.008 0|1:129:96,30,2:96:3854:30,2:1199,82:-68.1382,0,-308.541,-90.2679,-310.804,-407.233 0|1:55:49,6,0:49:1969:6,0:243,0:-5.19544,0,-160.843,-19.9459,-162.649,-182.199 0|1:121:90,30,1:90:3621:30,1:1165,41:-66.4017,0,-289.372,-90.1094,-295.019,-388.236 0|0:86:81,4,1:81:3240:4,1:159,41:0,-11.3024,-276.957,-20.9969,-274.777,-287.567 0|0:84:72,0,12:72:2861:0,12:0,485:-18.7136,-40.3878,-275.907,0,-235.922,-232.31 dDocent_Contig_8462 98 . N A 343.336 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=14;CIGAR=1X;DP=14;DPB=14;DPRA=0;EPP=33.4109;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=355;QR=0;RO=0;RPL=14;RPP=33.4109;RPPR=0;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:25:-2.49986,-0.30103,0 1/1:4:0,4:0:0:4:74:-6.8436,-1.20412,0 1/1:1:0,1:0:0:1:25:-2.49986,-0.30103,0 1/1:4:0,4:0:0:4:92:-8.50864,-1.20412,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:3:0,3:0:0:3:104:-9.70309,-0.90309,0 dDocent_Contig_8463 7 . C A 166.456 . AB=0.100478;ABP=582.534;AC=1;AF=0.0833333;AN=12;AO=49;CIGAR=1X;DP=1230;DPB=1230;DPRA=0.808511;EPP=109.412;EPPR=2567.52;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9492;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995766;PAO=0;PQA=0;PQR=0;PRO=0;QA=1869;QR=45451;RO=1181;RPL=0;RPP=109.412;RPPR=2567.52;RPR=49;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=1181;SRP=2567.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:62:59,3:59:2276:3:117:0,-7.75348,-194.147 0/0:219:218,1:218:8406:1:39:0,-62.029,-752.404 0/0:61:58,3:58:2227:3:116:0,-7.54512,-189.832 0/0:85:85,0:85:3249:0:0:0,-25.5875,-292.55 0/1:418:376,42:376:14465:42:1597:-18.1685,0,-1174.66 0/0:385:385,0:385:14828:0:0:0,-115.897,-1333.8 dDocent_Contig_8464 17 . G A 260.871 . AB=0.34375;ABP=9.79615;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X1M1X;DP=88;DPB=88;DPRA=2.85714;EPP=26.8965;EPPR=170.214;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=410;QR=3019;RO=77;RPL=0;RPP=26.8965;RPPR=170.214;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=77;SRP=170.214;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:6:6,0:6:236:0:0:0,-1.80618,-21.6112 0|0:12:12,0:12:466:0:0:0,-3.61236,-42.29 0|0:4:4,0:4:149:0:0:0,-1.20412,-13.7719 0|0:8:8,0:8:306:0:0:0,-2.40824,-27.897 0|0:26:26,0:26:1043:0:0:0,-7.82678,-94.1621 0|1:32:21,11:21:819:11:410:-27.61,0,-64.392 dDocent_Contig_8465 25 . G C 954.416 . AB=0.342857;ABP=25.5316;AC=3;AF=0.25;AN=12;AO=39;CIGAR=1X;DP=213;DPB=213;DPRA=1.65217;EPP=87.6977;EPPR=380.846;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.897436;PAIREDR=0.758621;PAO=0;PQA=0;PQR=0;PRO=0;QA=1576;QR=6884;RO=174;RPL=0;RPP=87.6977;RPPR=380.846;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=174;SRP=380.846;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:35,1:35:1365:1:36:0,-7.2388,-119.515 0/1:40:29,11:29:1129:11:446:-28.4539,0,-89.8536 0/0:23:23,0:23:911:0:0:0,-6.92369,-82.2919 0/1:36:22,14:22:869:14:561:-39.9937,0,-67.6796 0/1:29:18,11:18:721:11:451:-32.2158,0,-56.4861 0/0:49:47,2:47:1889:2:82:0,-6.97079,-162.427 dDocent_Contig_8466 22 . A T 54.1059 . AB=0.112903;ABP=83.705;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=375;DPB=375;DPRA=0.990415;EPP=18.2106;EPPR=802.112;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=277;QR=14760;RO=368;RPL=0;RPP=18.2106;RPPR=802.112;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=368;SRP=802.112;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:62:55,7:55:2203:7:277:-6.63244,0,-179.778 0/0:90:90,0:90:3619:0:0:0,-27.0927,-325.725 0/0:25:25,0:25:1006:0:0:0,-7.52575,-90.8343 0/0:77:77,0:77:3083:0:0:0,-23.1793,-277.549 0/0:70:70,0:70:2797:0:0:0,-21.0721,-251.836 0/0:51:51,0:51:2052:0:0:0,-15.3525,-184.863 dDocent_Contig_8467 25 . C T 691.988 . AB=0.213836;ABP=116.104;AC=3;AF=0.25;AN=12;AO=34;CIGAR=1X;DP=538;DPB=538;DPRA=0.419525;EPP=76.8404;EPPR=1097.43;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1347;QR=19825;RO=504;RPL=0;RPP=76.8404;RPPR=1097.43;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=504;SRP=1097.43;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:53:43,10:43:1674:10:394:-19.8585,0,-134.934 0/0:73:73,0:73:2800:0:0:0,-21.9752,-252.13 0/1:32:25,7:25:1011:7:281:-16.0281,0,-81.6514 0/1:74:57,17:57:2201:17:672:-38.5341,0,-175.99 0/0:93:93,0:93:3731:0:0:0,-27.9958,-335.804 0/0:213:213,0:213:8408:0:0:0,-64.1194,-756.275 dDocent_Contig_8468 8 . T C 1819.65 . AB=0.213457;ABP=310.387;AC=4;AF=0.333333;AN=12;AO=115;CIGAR=2X1M;DP=744;DPB=744;DPRA=0;EPP=173.424;EPPR=1347.15;GTI=0;LEN=1;MEANALT=1.66667;MQM=59.9304;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.33913;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4394;QR=23774;RO=619;RPL=0;RPP=252.73;RPPR=1347.15;RPR=115;RUN=1;SAF=105;SAP=173.424;SAR=10;SRF=619;SRP=1347.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:151:135,0,16:135:5192:0,16:0,612:-9.96307,-50.6021,-476.867,0,-426.647,-421.831 0|0:155:142,0,12:142:5431:0,12:0,465:0,-42.7463,-488.391,-4.54611,-450.188,-446.576 0|0:158:147,0,11:147:5643:0,11:0,417:0,-44.2514,-507.457,-9.68289,-473.268,-469.956 0|1:188:163,1,24:163:6286:1,24:39,929:-27.2438,-73.1057,-589.007,0,-512.994,-508.975 0|1:58:24,4,30:24:922:4,30:142,1135:-85.8369,-81.496,-155.983,0,-64.149,-66.6824 0|1:34:8,4,22:8:300:4,22:147,836:-66.1435,-56.5357,-79.9035,0,-12.5628,-17.9555 dDocent_Contig_8469 18 . C A 72.3318 . AB=0.11236;ABP=119.172;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=590;DPB=590;DPRA=0.731481;EPP=29.068;EPPR=1255.95;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998267;PAO=0;PQA=0;PQR=0;PRO=0;QA=465;QR=23162;RO=577;RPL=0;RPP=29.068;RPPR=1255.95;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=577;SRP=1255.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:94:94,0:94:3808:0:0:0,-28.2968,-342.701 0/1:89:79,10:79:3152:10:391:-8.75606,0,-256.951 0/0:69:67,2:67:2712:2:74:0,-13.7462,-237.157 0/0:80:79,0:79:3168:0:0:0,-23.7814,-284.914 0/0:115:115,0:115:4592:0:0:0,-34.6184,-413.193 0/0:143:143,0:143:5730:0:0:0,-43.0473,-515.478 dDocent_Contig_8470 29 . T A 251.326 . AB=0.136986;ABP=170.124;AC=4;AF=0.333333;AN=12;AO=22;CIGAR=1X;DP=202;DPB=202;DPRA=2.04444;EPP=50.7827;EPPR=391.704;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.272727;PAIREDR=0.648045;PAO=0;PQA=0;PQR=0;PRO=0;QA=889;QR=7140;RO=179;RPL=0;RPP=50.7827;RPPR=391.704;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=179;SRP=391.704;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:49:45,4:45:1795:4:161:-0.125015,0,-147.003 0/1:33:28,5:28:1118:5:204:-8.81004,0,-90.9665 0/0:38:35,2:35:1415:2:79:0,-3.83906,-120.191 0/1:39:33,6:33:1292:6:244:-10.5987,0,-104.793 0/0:18:18,0:18:717:0:0:0,-5.41854,-64.8538 0/1:25:20,5:20:803:5:201:-10.9448,0,-65.0598 dDocent_Contig_8471 22 . C T 377.311 . AB=0.0813953;ABP=133.905;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X3M;DP=252;DPB=252;DPRA=1.98611;EPP=24.725;EPPR=463.362;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.3;PAIREDR=0.575472;PAO=0;PQA=0;PQR=0;PRO=0;QA=384;QR=8396;RO=212;RPL=0;RPP=24.725;RPPR=463.362;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=212;SRP=463.362;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:32:28,0,4,0:28:1115:0,4,0:0,163,0:-5.42547,-13.8543,-105.659,0,-92.2103,-91.0062,-13.8543,-105.659,-92.2103,-105.659 0|0:54:42,0,6,6:42:1646:0,6,6:0,242,228:-7.31623,-19.9595,-155.305,0,-135.356,-133.55,-1.27287,-136.609,-116.659,-134.802 0|0:24:23,0,1,0:23:900:0,1,0:0,38,0:0,-6.92369,-80.9271,-3.42745,-77.811,-77.51,-6.92369,-80.9271,-77.811,-80.9271 0|0:57:51,0,3,3:51:2024:0,3,3:0,118,117:0,-15.3525,-181.971,-5.64421,-172.265,-171.362,-5.73654,-172.354,-162.648,-171.451 0|1:32:23,8,0,1:23:915:8,0,1:314,0,39:-18.9035,0,-72.9365,-25.8272,-75.3447,-101.168,-22.6216,-72.1392,-97.9628,-97.6618 0|1:53:45,8,0,0:45:1796:8,0,0:321,0,0:-13.3039,0,-145.901,-26.8502,-148.309,-174.759,-26.8502,-148.309,-174.759,-174.759 dDocent_Contig_8472 62 . G A 115.133 . AB=0.138298;ABP=109.828;AC=3;AF=0.25;AN=12;AO=16;CIGAR=1X;DP=175;DPB=175;DPRA=1.48864;EPP=37.7539;EPPR=348.274;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.5625;PAIREDR=0.597484;PAO=0;PQA=0;PQR=0;PRO=0;QA=593;QR=5940;RO=159;RPL=16;RPP=37.7539;RPPR=348.274;RPR=0;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=159;SRP=348.274;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:45:39,6:39:1480:6:225:-7.06436,0,-119.931 0/0:26:26,0:26:984:0:0:0,-7.82678,-88.8705 0/0:18:18,0:18:668:0:0:0,-5.41854,-60.4447 0/0:37:34,3:34:1264:3:105:0,-1.34366,-104.249 0/1:15:13,2:13:472:2:78:-2.88802,0,-38.2979 0/1:34:29,5:29:1072:5:185:-6.77349,0,-86.5442 dDocent_Contig_8473 14 . A T 6173.47 . AB=0.148265;ABP=684.305;AC=1;AF=0.0833333;AN=12;AO=94;CIGAR=2X;DP=805;DPB=805;DPRA=0.74152;EPP=207.129;EPPR=1090.92;GTI=0;LEN=1;MEANALT=2.4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3688;QR=19729;RO=501;RPL=0;RPP=207.129;RPPR=1090.92;RPR=94;RUN=1;SAF=94;SAP=207.129;SAR=0;SRF=501;SRP=1090.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:133:56,30,47:56:2195:30,47:1159,1886:-138.543,-60.2268,-231.682,0,-85.3174,-166.347 0|0:116:65,2,49:65:2554:2,49:77,1948:-140.82,-154.066,-363.509,0,-203.734,-195.305 0|0:119:49,12,58:49:1922:12,58:472,2309:-175.365,-151.293,-305.723,0,-119.221,-140.585 0|0:144:70,28,46:70:2758:28,46:1109,1814:-128.157,-57.954,-276.405,0,-135.604,-213.031 0|0:171:168,0,0:168:6624:0,0:0,0:0,-50.573,-595.504,-50.573,-595.504,-595.504 0|1:122:93,22,1:93:3676:22,1:871,41:-43.6843,0,-295.864,-68.2955,-299.102,-370.481 dDocent_Contig_8474 72 . T G 945.98 . AB=0.380952;ABP=15.9357;AC=4;AF=0.333333;AN=12;AO=40;CIGAR=1X;DP=171;DPB=171;DPRA=0.795455;EPP=89.8692;EPPR=287.473;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.6;PAIREDR=0.603053;PAO=0;PQA=0;PQR=0;PRO=0;QA=1467;QR=4686;RO=131;RPL=40;RPP=89.8692;RPPR=287.473;RPR=0;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=131;SRP=287.473;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:12,12:12:439:12:441:-32.8077,0,-32.6272 0/1:34:17,17:17:626:17:611:-45.0843,0,-46.4353 0/1:25:19,6:19:684:6:223:-12.9008,0,-54.3527 0/1:22:17,5:17:556:5:192:-11.0271,0,-43.7172 0/0:40:40,0:40:1448:0:0:0,-12.0412,-130.6 0/0:26:26,0:26:933:0:0:0,-7.82678,-84.2816 dDocent_Contig_8475 26 . G A 184.233 . AB=0.204082;ABP=40.2799;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=129;DPB=129;DPRA=1.30357;EPP=26.8965;EPPR=259.244;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.7966;NS=6;NUMALT=1;ODDS=0;PAIRED=0.727273;PAIREDR=0.567797;PAO=0;PQA=0;PQR=0;PRO=0;QA=437;QR=4684;RO=118;RPL=0;RPP=26.8965;RPPR=259.244;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=118;SRP=259.244;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:919:0:0:0,-6.92369,-83.0137 0/1:18:14,4:14:559:4:159:-9.27358,0,-45.235 0/0:16:16,0:16:635:0:0:0,-4.81648,-57.3802 0/0:17:17,0:17:670:0:0:0,-5.11751,-60.6297 0/1:31:25,6:25:983:6:237:-12.3716,0,-79.4356 0/0:24:23,1:23:918:1:41:0,-3.13015,-78.8329 dDocent_Contig_8477 106 . N T 456.586 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=16;CIGAR=2X;DP=18;DPB=18;DPRA=0;EPP=37.7539;EPPR=0;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=481;QR=0;RO=0;RPL=0;RPP=37.7539;RPPR=0;RPR=16;RUN=1;SAF=0;SAP=37.7539;SAR=16;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 1|1:3:0,3:0:0:3:93:-8.67814,-0.90309,0 1|1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 1|1:2:0,1:0:0:1:33:-3.09918,-0.30103,0 1|1:3:0,3:0:0:3:88:-8.21161,-0.90309,0 1|1:8:0,7:0:0:7:206:-18.7244,-2.10721,0 dDocent_Contig_8478 135 . C A 914.352 . AB=0.236559;ABP=59.0716;AC=6;AF=0.5;AN=12;AO=22;CIGAR=8M1X;DP=148;DPB=148.333;DPRA=0;EPP=50.7827;EPPR=224.5;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=845;QR=3802;RO=102;RPL=0;RPP=50.7827;RPPR=224.5;RPR=22;RUN=1;SAF=0;SAP=50.7827;SAR=22;SRF=0;SRP=224.5;SRR=102;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:24:18,0,5,0:18:672:0,5,0:0,177,0:-8.97649,-14.395,-69.4283,0,-55.0158,-53.5106,-14.395,-69.4283,-55.0158,-69.4283 0|1:23:19,0,0,4:19:706:0,0,4:0,0,138:-5.83356,-11.5531,-69.3552,-11.5531,-69.3552,-69.3552,0,-58.1515,-58.1515,-56.9474 1|1:12:0,6,0,6:0:0:6,0,6:187,0,231:-34.3298,-19.3515,-17.5453,-34.3298,-19.3515,-34.3298,-15.3264,0,-15.3264,-13.5202 0|1:31:19,11,0,0:19:716:11,0,0:404,0,0:-27.3881,0,-55.457,-33.1076,-58.7683,-91.7945,-33.1076,-58.7683,-91.7945,-91.7945 0|1:44:39,0,0,5:39:1445:0,0,5:0,0,203:-5.40753,-17.1477,-135.342,-17.1477,-135.342,-135.342,0,-118.595,-118.595,-117.09 0|1:14:7,0,0,7:7:263:0,0,7:0,0,273:-20.7215,-22.8287,-44.3684,-22.8287,-44.3684,-44.3684,0,-21.9223,-21.9223,-19.8151 dDocent_Contig_8479 66 . A G 378.816 . AB=0.163265;ABP=147.79;AC=4;AF=0.333333;AN=12;AO=28;CIGAR=1X;DP=228;DPB=228;DPRA=1.55385;EPP=63.8115;EPPR=437.305;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.535714;PAIREDR=0.57;PAO=0;PQA=0;PQR=0;PRO=0;QA=1125;QR=7880;RO=200;RPL=28;RPP=63.8115;RPPR=437.305;RPR=0;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=200;SRP=437.305;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:46:37,9:37:1405:9:360:-18.9159,0,-112.858 0/0:55:51,4:51:1988:4:160:0,-1.77322,-164.331 0/1:49:39,10:39:1561:10:402:-21.7885,0,-125.977 0/1:34:31,3:31:1245:3:121:-1.04518,0,-102.085 0/1:18:16,2:16:639:2:82:-2.36114,0,-52.4255 0/0:26:26,0:26:1042:0:0:0,-7.82678,-94.0671 dDocent_Contig_8480 176 . G A 577.51 . AB=0.316456;ABP=26.1269;AC=4;AF=0.333333;AN=12;AO=26;CIGAR=1X;DP=142;DPB=142;DPRA=0.660606;EPP=59.4686;EPPR=254.901;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0;PAIREDR=0.689655;PAO=0;PQA=0;PQR=0;PRO=0;QA=1009;QR=4519;RO=116;RPL=26;RPP=59.4686;RPPR=254.901;RPR=0;RUN=1;SAF=0;SAP=59.4686;SAR=26;SRF=0;SRP=254.901;SRR=116;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:14:7,7:7:284:7:253:-18.8941,0,-21.7196 0/1:22:17,5:17:658:5:191:-10.9301,0,-52.9224 0/1:23:18,5:18:711:5:204:-11.8203,0,-57.3903 0/0:33:33,0:33:1333:0:0:0,-9.93399,-120.225 0/0:30:29,1:29:1076:1:39:0,-5.13434,-93.2155 0/1:20:12,8:12:457:8:322:-23.3283,0,-35.4486 dDocent_Contig_8481 7 . C T 3589.51 . AB=0.492481;ABP=3.14091;AC=6;AF=0.5;AN=12;AO=131;CIGAR=1X;DP=266;DPB=266;DPRA=0;EPP=287.473;EPPR=293.988;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4979;QR=5095;RO=134;RPL=0;RPP=287.473;RPPR=293.988;RPR=131;RUN=1;SAF=131;SAP=287.473;SAR=0;SRF=134;SRP=293.988;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:8,16:8:312:16:600:-47.1103,0,-21.2202 0/1:53:22,31:22:825:31:1185:-90.993,0,-58.6112 0/1:29:25,4:25:966:4:155:-5.59557,0,-78.5238 0/1:64:32,32:32:1209:32:1208:-89.751,0,-89.84 0/1:17:12,5:12:457:5:193:-12.624,0,-36.3609 0/1:79:35,43:35:1326:43:1638:-124.099,0,-96.0366 dDocent_Contig_8482 7 . C T 790.03 . AB=0.213198;ABP=143.759;AC=5;AF=0.416667;AN=12;AO=44;CIGAR=1X;DP=234;DPB=234;DPRA=0;EPP=98.5551;EPPR=413.419;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.318182;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1678;QR=7236;RO=189;RPL=0;RPP=98.5551;RPPR=413.419;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=189;SRP=413.419;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:11,1:11:424:1:38:-0.184909,0,-34.9013 0/0:37:35,2:35:1342:2:78:0,-3.73464,-113.663 0/1:91:76,15:76:2905:15:576:-24.7877,0,-234.23 0/1:55:37,17:37:1411:17:637:-41.0184,0,-110.624 0/1:23:18,5:18:692:5:195:-11.0005,0,-55.6895 0/1:16:12,4:12:462:4:154:-9.41711,0,-37.1142 dDocent_Contig_8484 9 . C T 1386.7 . AB=0.0421512;ABP=1255.71;AC=0;AF=0;AN=12;AO=29;CIGAR=1X3M;DP=973;DPB=973;DPRA=0;EPP=65.983;EPPR=1622.93;GTI=0;LEN=1;MEANALT=4.75;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.97319;PAO=0;PQA=0;PQR=0;PRO=0;QA=1106;QR=28917;RO=746;RPL=0;RPP=65.983;RPPR=1622.93;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=746;SRP=1622.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:142:114,7,3,15,2:114:4441:7,3,15,2:271,115,583,75:-13.5821,-25.6374,-388.523,-38.4612,-381.192,-402.551,0,-342.733,-355.556,-360.479,-41.7572,-384.488,-397.311,-358.852,-406.148 0|0:260:204,7,7,38,2:204:7903:7,7,38,2:270,267,1479,81:-60.1299,-99.3673,-746.455,-99.6367,-726.659,-746.724,0,-627.036,-627.304,-637.769,-114.86,-741.883,-742.152,-642.528,-763.453 0|0:124:83,3,10,17,11:83:3215:3,10,17,11:112,378,675,412:-30.5897,-46.4063,-309.603,-24.5932,-279.522,-285.681,0,-254.938,-233.124,-258.989,-21.846,-276.774,-254.96,-230.375,-282.632 0|0:162:110,14,9,16,12:110:4237:14,9,16,12:523,346,610,459:-16.9117,-7.30437,-350.953,-21.6187,-326.762,-366.775,0,-305.144,-319.46,-343.049,-12.3614,-317.505,-331.822,-310.203,-356.615 0|0:106:87,8,0,2,9:87:3365:8,0,2,9:306,0,78,346:-2.21589,-3.30235,-277.275,-28.4055,-279.683,-304.787,-21.9937,-273.272,-298.376,-297.774,0,-251.278,-276.382,-269.971,-273.673 0|0:179:148,2,0,22,7:148:5756:2,0,22,7:78,0,863,263:-26.4205,-64.7742,-537.178,-70.973,-537.78,-543.979,0,-466.818,-473.017,-466.395,-49.4401,-516.244,-522.444,-451.481,-520.336 dDocent_Contig_8485 110 . C A 98.4893 . AB=0.189189;ABP=34.0565;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=267;DPB=267;DPRA=0.804348;EPP=18.2106;EPPR=567.593;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.857143;PAIREDR=0.719231;PAO=0;PQA=0;PQR=0;PRO=0;QA=243;QR=8847;RO=260;RPL=0;RPP=18.2106;RPPR=567.593;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=567.593;SRR=260;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:30,7:30:1031:7:243:-11.0708,0,-81.9623 0/0:54:54,0:54:1856:0:0:0,-16.2556,-167.323 0/0:57:57,0:57:1949:0:0:0,-17.1587,-175.688 0/0:44:44,0:44:1497:0:0:0,-13.2453,-135.022 0/0:49:49,0:49:1678:0:0:0,-14.7505,-151.306 0/0:26:26,0:26:836:0:0:0,-7.82678,-75.5379 dDocent_Contig_8486 15 . C G 1711.57 . AB=0.273077;ABP=119.301;AC=1;AF=0.0833333;AN=12;AO=99;CIGAR=1X;DP=956;DPB=956;DPRA=0;EPP=217.986;EPPR=1844.42;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.969697;PAIREDR=0.995283;PAO=0;PQA=0;PQR=0;PRO=0;QA=3880;QR=33685;RO=848;RPL=0;RPP=217.986;RPPR=1844.42;RPR=99;RUN=1;SAF=99;SAP=217.986;SAR=0;SRF=848;SRP=1844.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:135:132,3:132:5198:3:118:0,-29.6375,-456.695 0/0:190:179,11:179:7134:11:444:0,-16.881,-601.41 0/0:104:102,2:102:4077:2:75:0,-24.1868,-359.775 0/0:140:135,5:135:5369:5:200:0,-23.7652,-464.682 0/1:260:180,71:180:7124:71:2761:-172.68,0,-564.88 0/0:127:120,7:120:4783:7:282:0,-12.4793,-404.615 dDocent_Contig_8488 1 . N G 479.2 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=15;CIGAR=1X;DP=15;DPB=15;DPRA=0;EPP=10.1038;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=505;QR=0;RO=0;RPL=0;RPP=35.5824;RPPR=0;RPR=15;RUN=1;SAF=4;SAP=10.1038;SAR=11;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:5:0,5:0:0:5:175:-16.0937,-1.50515,0 1/1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 1/1:6:0,6:0:0:6:192:-17.592,-1.80618,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_8489 7 . C T 942.997 . AB=0.0429448;ABP=298.77;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X1M2X;DP=336;DPB=336;DPRA=0.786232;EPP=26.8965;EPPR=502.449;GTI=0;LEN=1;MEANALT=4.75;MQM=57.8182;MQMR=59.7565;NS=6;NUMALT=5;ODDS=0;PAIRED=0;PAIREDR=0.4;PAO=0;PQA=0;PQR=0;PRO=0;QA=413;QR=8851;RO=230;RPL=0;RPP=26.8965;RPPR=502.449;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=230;SRP=502.449;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:54:47,2,4,0,1,0:47:1799:2,4,0,1,0:72,151,0,38,0:0,-8.27877,-155.256,-1.76625,-143.483,-148.152,-14.1484,-155.858,-149.357,-161.732,-11.0307,-152.742,-146.24,-158.616,-158.315,-14.1484,-155.858,-149.357,-161.732,-158.616,-161.732 0|1:51:28,12,2,1,3,5:28:1084:12,2,1,3,5:459,73,39,108,203:-29.2361,0,-85.2471,-31.7028,-82.8967,-119.96,-34.4588,-85.6535,-117.356,-123.018,-28.8572,-80.0504,-111.752,-114.509,-116.812,-20.9163,-72.1141,-103.817,-106.574,-100.97,-108.275 0|0:44:28,6,3,1,0,6:28:1077:6,3,1,0,6:230,112,39,0,234:-10.8067,-0.358289,-86.973,-10.1016,-79.6435,-97.6178,-16.0292,-85.5731,-95.3149,-104.15,-19.2355,-88.7792,-98.5208,-104.451,-107.657,0,-69.5461,-79.288,-85.2177,-88.4238,-86.6176 0|1:50:30,8,0,0,1,7:30:1164:8,0,0,1,7:303,0,0,39,286:-15.811,0,-93.2379,-24.8419,-95.6461,-120.487,-24.8419,-95.6461,-120.487,-120.487,-21.6354,-92.4401,-117.281,-117.281,-116.98,-1.22643,-72.042,-96.8835,-96.8835,-93.6774,-94.7763 0|0:69:61,0,0,0,3,5:61:2358:0,0,0,3,5:0,0,0,113,195:0,-18.3628,-212.048,-18.3628,-212.048,-212.048,-18.3628,-212.048,-212.048,-212.048,-9.17642,-202.858,-202.858,-202.858,-201.955,-2.51469,-196.207,-196.207,-196.207,-187.017,-194.702 0|0:68:36,5,2,5,1,17:36:1369:5,2,5,1,17:192,77,191,37,685:-45.6332,-40.7109,-151.474,-50.1485,-146.656,-161.815,-40.8619,-137.369,-146.807,-151.624,-53.444,-149.952,-159.391,-150.103,-165.412,0,-96.5131,-105.952,-96.6638,-109.248,-107.157 dDocent_Contig_8490 209 . N G 76.8682 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_8491 55 . C A 268.118 . AB=0.145833;ABP=212.195;AC=3;AF=0.25;AN=12;AO=38;CIGAR=1X;DP=393;DPB=393;DPRA=0;EPP=85.5263;EPPR=769.54;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.526316;PAIREDR=0.594901;PAO=0;PQA=0;PQR=0;PRO=0;QA=1356;QR=13084;RO=353;RPL=19;RPP=3.0103;RPPR=20.2898;RPR=19;RUN=1;SAF=19;SAP=3.0103;SAR=19;SRF=203;SRP=20.2898;SRR=150;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:50,4:50:1870:4:153:0,-2.11603,-154.377 0/1:90:76,14:76:2885:14:481:-16.5104,0,-232.698 0/0:77:72,5:72:2640:5:181:0,-6.53665,-221.142 0/1:36:30,6:30:1038:6:212:-8.58309,0,-82.8688 0/0:70:67,1:67:2465:1:35:0,-17.3312,-218.52 0/1:66:58,8:58:2186:8:294:-6.94018,0,-177.083 dDocent_Contig_8492 23 . G A 257.366 . AB=0.116466;ABP=321.153;AC=3;AF=0.25;AN=12;AO=31;CIGAR=1X;DP=507;DPB=507;DPRA=0.892857;EPP=70.3259;EPPR=1034.46;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1233;QR=18826;RO=475;RPL=0;RPP=70.3259;RPPR=1034.46;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=475;SRP=1034.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:27:24,3:24:943:3:120:-3.05988,0,-77.0401 0/1:165:144,21:144:5701:21:836:-25.886,0,-463.241 0/0:76:74,2:74:2875:2:80:0,-15.2867,-251.264 0/1:57:52,5:52:2076:5:197:-0.947317,0,-169.865 0/0:89:88,0:88:3535:0:0:0,-26.4906,-317.806 0/0:93:93,0:93:3696:0:0:0,-27.9958,-332.662 dDocent_Contig_8493 7 . C T 641.92 . AB=0.108981;ABP=1319.1;AC=4;AF=0.333333;AN=12;AO=138;CIGAR=1X;DP=1439;DPB=1439;DPRA=0;EPP=302.673;EPPR=2812.9;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.962906;PAO=0;PQA=0;PQR=0;PRO=0;QA=5196;QR=49569;RO=1294;RPL=0;RPP=302.673;RPPR=2812.9;RPR=138;RUN=1;SAF=138;SAP=302.673;SAR=0;SRF=1294;SRP=2812.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:155:141,14:141:5374:14:530:-1.38167,0,-436.997 0/1:395:350,45:350:13391:45:1670:-31.6495,0,-1085.69 0/1:206:181,25:181:6930:25:955:-24.2525,0,-561.558 0/0:241:222,18:222:8537:18:665:0,-12.2533,-707.915 0/1:235:206,24:206:7925:24:920:-13.4948,0,-643.427 0/0:207:194,12:194:7412:12:456:0,-21.0047,-625.538 dDocent_Contig_8494 22 . T C 13875.2 . AB=0.371656;ABP=200.884;AC=6;AF=0.5;AN=12;AO=514;CIGAR=1X;DP=1383;DPB=1383;DPRA=0;EPP=1119.15;EPPR=1885.68;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.980545;PAIREDR=0.988466;PAO=0;PQA=0;PQR=0;PRO=0;QA=20165;QR=34261;RO=867;RPL=0;RPP=1119.15;RPPR=1885.68;RPR=514;RUN=1;SAF=514;SAP=1119.15;SAR=0;SRF=867;SRP=1885.68;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:183:88,95:88:3476:95:3737:-281.264,0,-257.805 0/1:260:151,109:151:5991:109:4266:-305.65,0,-460.714 0/1:139:60,79:60:2374:79:3118:-238.867,0,-171.975 0/1:203:135,68:135:5399:68:2698:-181.842,0,-424.637 0/1:363:313,49:313:12279:49:1881:-60.1446,0,-994.944 0/1:235:120,114:120:4742:114:4465:-330.978,0,-355.869 dDocent_Contig_8495 8 . G A 271.629 . AB=0.272727;ABP=22.751;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=289;DPB=289;DPRA=1.312;EPP=33.4109;EPPR=597.994;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99635;PAO=0;PQA=0;PQR=0;PRO=0;QA=538;QR=10522;RO=274;RPL=0;RPP=33.4109;RPPR=597.994;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=274;SRP=597.994;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:58,1:58:2223:1:37:0,-14.0629,-196.593 0/0:61:60,1:60:2307:1:39:0,-14.4663,-203.946 0/0:19:19,0:19:734:0:0:0,-5.71957,-66.3914 0/0:66:65,0:65:2506:0:0:0,-19.5669,-225.35 0/1:44:32,12:32:1214:12:462:-28.6858,0,-96.304 0/0:40:40,0:40:1538:0:0:0,-12.0412,-138.691 dDocent_Contig_8496 98 . N A 95.808 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=96;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:64:-6.07869,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_8497 94 . T A 13871.6 . AB=0.602428;ABP=63.0635;AC=6;AF=0.5;AN=12;AO=551;CIGAR=1X2M1X;DP=835;DPB=835;DPRA=27.6333;EPP=1199.49;EPPR=602.337;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.978261;PAO=0;PQA=0;PQR=0;PRO=0;QA=18191;QR=9291;RO=276;RPL=551;RPP=1199.49;RPPR=602.337;RPR=0;RUN=1;SAF=551;SAP=1199.49;SAR=0;SRF=276;SRP=602.337;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:214:48,162:48:1620:162:5302:-413.983,0,-82.6928 1|1:170:16,154:16:525:154:5136:-414.867,-3.61122,0 0|1:187:104,83:104:3489:83:2744:-190.926,0,-257.951 0|1:215:72,139:72:2443:139:4585:-349.071,0,-156.347 0|0:6:6,0:6:206:0:0:0,-1.80618,-18.8768 0|1:43:30,13:30:1008:13:424:-25.5296,0,-78.0828 dDocent_Contig_8498 16 . C T 1400.53 . AB=0.158209;ABP=682.856;AC=4;AF=0.333333;AN=12;AO=134;CIGAR=1X;DP=1038;DPB=1038;DPRA=0;EPP=293.988;EPPR=1963.85;GTI=0;LEN=1;MEANALT=1.16667;MQM=39.9478;MQMR=59.9524;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.0522388;PAIREDR=0.684385;PAO=0;PQA=0;PQR=0;PRO=0;QA=5360;QR=36185;RO=903;RPL=0;RPP=293.988;RPPR=1963.85;RPR=134;RUN=1;SAF=134;SAP=293.988;SAR=0;SRF=903;SRP=1963.85;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:164:140,23:140:5618:23:919:-24.9442,0,-456.009 0/0:199:186,13:186:7436:13:513:0,-17.4501,-626.382 0/1:190:167,23:167:6680:23:928:-18.8769,0,-543.677 0/1:138:110,28:110:4403:28:1137:-51.3056,0,-354.665 0/0:169:154,15:154:6203:15:596:0,-1.06722,-508.182 0/1:178:146,32:146:5845:32:1267:-52.1481,0,-472.223 dDocent_Contig_8499 46 . C A 341.007 . AB=0.306122;ABP=19.0083;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=285;DPB=285;DPRA=1.03814;EPP=4.31318;EPPR=3.52502;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.755556;PAO=0;PQA=0;PQR=0;PRO=0;QA=556;QR=9839;RO=270;RPL=0;RPP=35.5824;RPPR=563.54;RPR=15;RUN=1;SAF=6;SAP=4.31318;SAR=9;SRF=134;SRP=3.04247;SRR=136;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:66:66,0:66:2424:0:0:0,-19.868,-218.363 0/0:49:49,0:49:1765:0:0:0,-14.7505,-159.096 0/0:18:18,0:18:636:0:0:0,-5.41854,-57.5614 0/0:63:63,0:63:2289:0:0:0,-18.9649,-206.227 0/0:40:40,0:40:1493:0:0:0,-12.0412,-134.636 0/1:49:34,15:34:1232:15:556:-35.6235,0,-96.4081 dDocent_Contig_8500 41 . C T 3549.81 . AB=0.0785124;ABP=376.432;AC=0;AF=0;AN=12;AO=19;CIGAR=2M15I4M1X3M;DP=355;DPB=520.9;DPRA=0.975806;EPP=44.2683;EPPR=304.845;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=602;QR=5373;RO=139;RPL=0;RPP=44.2683;RPPR=304.845;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=139;SRP=304.845;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:94:19,9,37,26:19:750:9,37,26:273,1400,796:-111.087,-94.9593,-153.975,-2.01842,-41.9164,-52.6254,-53.0391,-92.9208,0,-106.937 0|0:51:17,0,10,24:17:652:0,10,24:0,355,744:-54.5633,-59.6808,-113.21,-30.7497,-84.2896,-81.2793,0,-53.5273,-24.62,-46.3026 0|0:49:1,5,12,31:1:33:5,12,31:161,403,1003:-110.566,-97.8874,-99.0505,-78.2317,-67.9201,-77.2877,-29.9725,-19.664,0,-23.3087 0|0:59:14,2,28,15:14:532:2,28,15:74,1046,469:-81.4526,-79.6123,-122.644,0,-37.5983,-35.225,-48.0068,-85.5817,-6.00531,-87.12 0|0:62:56,0,4,0:56:2178:0,4,0:0,121,0:0,-16.8577,-195.893,-7.23055,-186.217,-185.013,-16.8577,-195.893,-186.217,-195.893 0|0:40:32,3,5,0:32:1228:3,5,0:94,196,0:-6.53287,-8.64085,-108.519,0,-93.3043,-99.3475,-16.1658,-109.422,-100.853,-116.971 dDocent_Contig_8501 82 . G A 85.1747 . AB=0.156863;ABP=55.1682;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=195;DPB=195;DPRA=1.04762;EPP=29.068;EPPR=400.39;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.166667;PAIREDR=0.530055;PAO=0;PQA=0;PQR=0;PRO=0;QA=441;QR=6327;RO=183;RPL=2;RPP=14.5915;RPPR=14.4135;RPR=10;RUN=1;SAF=2;SAP=14.5915;SAR=10;SRF=107;SRP=14.4135;SRR=76;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1123:0:0:0,-9.93399,-101.369 0/0:35:33,2:33:1130:2:74:0,-3.51017,-94.9759 0/0:30:30,0:30:1065:0:0:0,-9.0309,-96.1604 0/1:23:20,3:20:696:3:111:-3.43023,0,-56.0386 0/1:28:23,5:23:799:5:182:-8.3064,0,-63.7983 0/0:46:44,2:44:1514:2:74:0,-6.8215,-129.522 dDocent_Contig_8502 15 . T A 159.972 . AB=0.127119;ABP=145.518;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=294;DPB=294;DPRA=1.31496;EPP=39.9253;EPPR=604.508;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=679;QR=11045;RO=277;RPL=0;RPP=39.9253;RPPR=604.508;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=277;SRP=604.508;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:49:47,2:47:1880:2:79:0,-7.25284,-161.909 0/1:77:68,9:68:2733:9:357:-9.3131,0,-222.9 0/0:45:45,0:45:1777:0:0:0,-13.5463,-160.145 0/1:41:35,6:35:1407:6:243:-9.90595,0,-114.543 0/0:40:40,0:40:1591:0:0:0,-12.0412,-143.423 0/0:42:42,0:42:1657:0:0:0,-12.6433,-149.354 dDocent_Contig_8503 13 . G A 21648.2 . AB=0.43043;ABP=77.3366;AC=5;AF=0.416667;AN=12;AO=761;CIGAR=1X;DP=2017;DPB=2017;DPRA=1.42008;EPP=1655.5;EPPR=2730.38;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=30081;QR=49919;RO=1256;RPL=0;RPP=1655.5;RPPR=2730.38;RPR=761;RUN=1;SAF=761;SAP=1655.5;SAR=0;SRF=1256;SRP=2730.38;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:423:279,144:279:11122:144:5663:-382.176,0,-872.89 0/1:358:176,182:176:7013:182:7224:-542.051,0,-523.089 0/1:329:138,191:138:5456:191:7552:-580.294,0,-391.828 0/1:321:142,179:142:5678:179:7074:-539.721,0,-414.199 0/0:249:249,0:249:9845:0:0:0,-74.9565,-885.472 0/1:337:272,65:272:10805:65:2568:-129.805,0,-870.315 dDocent_Contig_8504 39 . G C 176.817 . AB=0.191489;ABP=41.8658;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=348;DPB=348;DPRA=1.175;EPP=37.7539;EPPR=717.425;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.945289;PAO=0;PQA=0;PQR=0;PRO=0;QA=638;QR=12838;RO=329;RPL=0;RPP=37.7539;RPPR=717.425;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=329;SRP=717.425;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:47:36,9:36:1362:9:361:-18.9034,0,-108.869 0/0:74:68,6:68:2684:6:238:0,-0.484432,-219.895 0/0:67:65,1:65:2525:1:39:0,-16.371,-223.479 0/0:58:58,0:58:2292:0:0:0,-17.4597,-206.452 0/0:56:56,0:56:2182:0:0:0,-16.8577,-196.555 0/0:46:46,0:46:1793:0:0:0,-13.8474,-161.584 dDocent_Contig_8505 13 . C T 1526 . AB=0.739726;ABP=39.4494;AC=2;AF=0.166667;AN=12;AO=69;CIGAR=1X1M1X;DP=553;DPB=553;DPRA=1.05682;EPP=152.842;EPPR=1051.83;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2702;QR=19113;RO=483;RPL=0;RPP=152.842;RPPR=1051.83;RPR=69;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=483;SRP=1051.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:85:78,7:78:3097:7:278:0,-2.01068,-255.248 0|0:218:214,4:214:8486:4:161:0,-51.9,-749.575 0|0:88:87,0:87:3448:0:0:0,-26.1896,-309.983 0|0:89:85,4:85:3340:4:163:0,-12.9746,-286.855 0|1:22:2,20:2:80:20:782:-59.2679,0,-0.96913 0|1:51:17,34:17:662:34:1318:-95.5167,0,-44.5551 dDocent_Contig_8506 11 . T C 2073.04 . AB=0.197697;ABP=416.57;AC=5;AF=0.416667;AN=12;AO=110;CIGAR=1X1M;DP=616;DPB=616;DPRA=0;EPP=241.872;EPPR=1093.09;GTI=0;LEN=1;MEANALT=1.33333;MQM=58.9909;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.290909;PAIREDR=0.802789;PAO=0;PQA=0;PQR=0;PRO=0;QA=4367;QR=20057;RO=502;RPL=0;RPP=241.872;RPPR=1093.09;RPR=110;RUN=1;SAF=110;SAP=241.872;SAR=0;SRF=502;SRP=1093.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:95:88,0,7:88:3519:0,7:0,257:0,-26.4906,-316.376,-5.16253,-295.416,-293.309 0|1:226:207,0,19:207:8263:0,19:0,757:-0.361951,-62.6752,-743.172,0,-680.895,-675.175 0|1:92:70,0,22:70:2790:0,22:0,871:-50.9892,-72.0613,-301.804,0,-230.139,-223.516 0|1:101:74,1,26:74:2956:1,26:40,1044:-63.7179,-82.7074,-325.866,0,-240.175,-235.635 0|1:53:34,0,19:34:1374:0,19:0,762:-52.9187,-63.1537,-176.432,0,-113.68,-107.961 0|1:49:29,3,17:29:1155:3,17:123,676:-46.8982,-45.4948,-139.698,0,-84.9636,-89.9787 dDocent_Contig_8507 98 . N A 113.739 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=7.37776;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:123:-11.3737,-1.20412,0 dDocent_Contig_8508 16 . T A 2385.93 . AB=0.0707071;ABP=319.958;AC=0;AF=0;AN=12;AO=14;CIGAR=1X1M1X;DP=277;DPB=277;DPRA=0;EPP=33.4109;EPPR=376.504;GTI=0;LEN=1;MEANALT=2;MQM=41.7143;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.428571;PAIREDR=0.459302;PAO=0;PQA=0;PQR=0;PRO=0;QA=556;QR=6814;RO=172;RPL=0;RPP=33.4109;RPPR=376.504;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=172;SRP=376.504;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:49:24,4,21:24:953:4,21:159,845:-62.47,-58.8995,-136.146,0,-67.7108,-72.1862 0|0:65:38,4,23:38:1497:4,23:160,926:-64.9363,-65.4892,-187.428,0,-112.31,-116.277 0|0:33:24,4,5:24:956:4,5:161,205:-9.73377,-5.92078,-83.4286,0,-67.7103,-77.2652 0|0:43:16,0,27:16:631:0,27:0,1068:-83.4667,-88.2832,-140.197,0,-52.3086,-44.1808 0|0:36:28,0,8:28:1091:0,8:0,319:-18.2395,-26.6683,-116.32,0,-90.0485,-87.6402 0|0:51:42,2,7:42:1686:2,7:76,285:-10.9689,-19.2794,-157.595,0,-134.686,-136.935 dDocent_Contig_8509 7 . C T 641.019 . AB=0.130435;ABP=548.711;AC=2;AF=0.166667;AN=12;AO=68;CIGAR=1X;DP=1006;DPB=1006;DPRA=1.6681;EPP=150.67;EPPR=2037.68;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2584;QR=35903;RO=937;RPL=0;RPP=150.67;RPPR=2037.68;RPR=68;RUN=1;SAF=68;SAP=150.67;SAR=0;SRF=937;SRP=2037.68;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:116:110,6:110:4222:6:226:0,-14.2175,-359.349 0/1:237:205,32:205:7872:32:1220:-38.7482,0,-636.939 0/0:198:196,2:196:7500:2:78:0,-52.2005,-667.431 0/1:223:195,28:195:7473:28:1060:-28.5755,0,-605.282 0/0:149:149,0:149:5737:0:0:0,-44.8535,-516.286 0/0:83:82,0:82:3099:0:0:0,-24.6845,-278.678 dDocent_Contig_8510 172 . G A 62.6131 . AB=0.272727;ABP=7.94546;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=51;DPB=51;DPRA=1.375;EPP=9.52472;EPPR=107.241;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=119;QR=1618;RO=48;RPL=3;RPP=9.52472;RPPR=107.241;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=107.241;SRR=48;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:240:0:0:0,-2.10721,-21.9334 0/0:5:5,0:5:171:0:0:0,-1.50515,-15.7261 0/0:3:3,0:3:108:0:0:0,-0.90309,-10.0752 0/1:11:8,3:8:266:3:119:-7.78406,0,-20.9523 0/0:15:15,0:15:491:0:0:0,-4.51545,-44.5005 0/0:10:10,0:10:342:0:0:0,-3.0103,-31.11 dDocent_Contig_8511 16 . T C 453.254 . AB=0.163842;ABP=176.74;AC=2;AF=0.166667;AN=12;AO=43;CIGAR=1X;DP=602;DPB=602;DPRA=1.30651;EPP=96.3836;EPPR=1216.86;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1663;QR=21163;RO=559;RPL=0;RPP=96.3836;RPPR=1216.86;RPR=43;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=559;SRP=1216.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:59,0:59:2259:0:0:0,-17.7608,-203.517 0/1:98:80,18:80:3011:18:680:-32.0126,0,-241.647 0/0:164:150,14:150:5694:14:539:0,-0.533955,-463.571 0/1:79:68,11:68:2599:11:444:-16.5344,0,-210.299 0/0:99:99,0:99:3742:0:0:0,-29.802,-336.867 0/0:103:103,0:103:3858:0:0:0,-31.0061,-347.309 dDocent_Contig_8512 17 . T A 207.086 . AB=0.117886;ABP=314.996;AC=6;AF=0.5;AN=12;AO=29;CIGAR=1X;DP=246;DPB=246;DPRA=0;EPP=65.983;EPPR=472.048;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.551724;PAIREDR=0.462963;PAO=0;PQA=0;PQR=0;PRO=0;QA=1152;QR=8596;RO=216;RPL=0;RPP=65.983;RPPR=472.048;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=216;SRP=472.048;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:40:36,4:36:1433:4:164:-3.1087,0,-117.183 0/1:69:62,7:62:2487:7:279:-4.70691,0,-203.201 0/1:31:26,5:26:1014:5:180:-7.2101,0,-82.213 0/1:33:27,6:27:1064:6:245:-12.4955,0,-86.1151 0/1:31:28,3:28:1119:3:121:-1.94827,0,-91.6613 0/1:42:37,4:37:1479:4:163:-2.31515,0,-120.618 dDocent_Contig_8513 63 . T A 908.246 . AB=0.0615836;ABP=572.312;AC=0;AF=0;AN=12;AO=21;CIGAR=2X2M1X;DP=383;DPB=383;DPRA=1.62381;EPP=48.6112;EPPR=650.109;GTI=0;LEN=1;MEANALT=2.4;MQM=32.381;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=0;PAIREDR=0.684564;PAO=0;PQA=0;PQR=0;PRO=0;QA=814;QR=10828;RO=298;RPL=0;RPP=48.6112;RPPR=32.8571;RPR=21;RUN=1;SAF=0;SAP=48.6112;SAR=21;SRF=181;SRP=32.8571;SRR=117;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:78:57,7,14:57:2047:7,14:270,516:-25.0682,-24.0855,-188.942,0,-148.852,-162.79 0|0:53:44,3,5:44:1596:3,5:105,184:-1.85252,-8.03223,-137.464,0,-123.321,-128.892 0|0:42:39,0,3:39:1422:0,3:0,111:0,-11.7402,-127.885,-2.29089,-118.805,-117.902 0|0:59:45,3,11:45:1670:3,11:122,424:-21.3137,-27.042,-162.778,0,-128.866,-133.383 0|0:78:59,6,11:59:2132:6,11:238,410:-15.8274,-18.9857,-191.175,0,-159.421,-170.728 0|0:73:54,2,17:54:1961:2,17:79,635:-35.7884,-47.1771,-206.691,0,-155.308,-155.063 dDocent_Contig_8514 62 . T C 501.567 . AB=0.5;ABP=3.0103;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=241;DPB=241;DPRA=0.878049;EPP=42.0968;EPPR=487.249;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.944444;PAIREDR=0.96861;PAO=0;PQA=0;PQR=0;PRO=0;QA=691;QR=8641;RO=223;RPL=18;RPP=42.0968;RPPR=487.249;RPR=0;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=223;SRP=487.249;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:67:67,0:67:2580:0:0:0,-20.169,-232.355 0/0:49:49,0:49:1905:0:0:0,-14.7505,-171.667 0/0:44:44,0:44:1711:0:0:0,-13.2453,-154.219 0/0:28:28,0:28:1092:0:0:0,-8.42884,-98.5723 0/0:17:17,0:17:666:0:0:0,-5.11751,-60.2723 0/1:36:18,18:18:687:18:691:-51.6796,0,-51.3143 dDocent_Contig_8515 98 . N G 79.7545 . AB=0;ABP=0;AC=4;AF=0.666667;AN=6;AO=3;CIGAR=1X;DP=5;DPB=5;DPRA=2;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=77;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:3:0,2:0:0:2:42:-3.87282,-0.60206,0 0/0:1:0,0:0:0:0:0:0,0,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_8516 17 . T C 156.637 . AB=0.195122;ABP=36.112;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=249;DPB=249;DPRA=1.43448;EPP=29.068;EPPR=500.424;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.991561;PAO=0;PQA=0;PQR=0;PRO=0;QA=464;QR=9413;RO=237;RPL=0;RPP=29.068;RPPR=517.649;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=235;SRP=500.424;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:48,0:48:1902:0:0:0,-14.4494,-171.381 0/0:31:31,0:31:1234:0:0:0,-9.33193,-111.33 0/0:27:27,0:27:1071:0:0:0,-8.12781,-96.6769 0/0:39:39,0:39:1536:0:0:0,-11.7402,-138.474 0/1:41:33,8:33:1314:8:324:-17.1866,0,-106.183 0/0:63:59,4:59:2356:4:140:0,-6.02587,-199.251 dDocent_Contig_8517 42 . A G 1629.26 . AB=0.271255;ABP=115.268;AC=4;AF=0.333333;AN=12;AO=67;CIGAR=1X;DP=255;DPB=255;DPRA=15.4375;EPP=148.499;EPPR=411.247;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994681;PAO=0;PQA=0;PQR=0;PRO=0;QA=2702;QR=7408;RO=188;RPL=0;RPP=148.499;RPPR=411.247;RPR=67;RUN=1;SAF=67;SAP=148.499;SAR=0;SRF=188;SRP=411.247;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:77:64,13:64:2503:13:531:-24.9571,0,-202.235 0/1:77:55,22:55:2185:22:877:-56.0589,0,-173.653 0/1:39:22,17:22:881:17:688:-50.5092,0,-67.8599 0/1:54:39,15:39:1514:15:606:-38.6219,0,-120.243 0/0:1:1,0:1:40:0:0:0,-0.30103,-3.99568 0/0:7:7,0:7:285:0:0:0,-2.10721,-26.0244 dDocent_Contig_8518 23 . A T 1577.22 . AB=0.133995;ABP=471.924;AC=6;AF=0.5;AN=12;AO=54;CIGAR=1X3M;DP=403;DPB=403;DPRA=0;EPP=120.27;EPPR=482.906;GTI=0;LEN=1;MEANALT=4;MQM=53.0556;MQMR=56.6923;NS=6;NUMALT=4;ODDS=5.55112e-17;PAIRED=0;PAIREDR=0.742081;PAO=0;PQA=0;PQR=0;PRO=0;QA=2141;QR=8525;RO=221;RPL=0;RPP=120.27;RPPR=482.906;RPR=54;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=221;SRP=482.906;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:69:34,23,8,2,2:34:1314:23,8,2,2:630,307,81,80:-33.3034,0,-98.8901,-30.7277,-93.0199,-134.119,-36.8501,-99.1323,-129.845,-142.053,-36.9396,-99.2217,-129.935,-136.062,-142.142 0|1:88:49,21,0,15,3:49:1898:21,0,15,3:615,0,596,120:-33.5548,-4.7482,-151.9,-48.3053,-158.222,-201.819,0,-109.957,-153.549,-149.034,-38.4143,-148.336,-191.933,-143.662,-191.03 0|1:51:29,14,0,6,2:29:1145:14,0,6,2:394,0,237,80:-18.6369,0,-87.6189,-27.3668,-91.8333,-119.254,-7.85666,-72.3559,-99.7717,-97.9655,-20.8748,-85.35,-112.769,-93.2864,-112.167 0|1:97:61,20,2,9,1:61:2339:20,2,9,1:637,79,351,36:-26.8684,0,-184.571,-41.8932,-187.253,-231.896,-17.2572,-162.64,-204.544,-205.175,-42.2924,-187.655,-229.56,-204.947,-232.6 0|1:35:7,8,7,11,2:7:275:8,7,11,2:188,278,441,81:-33.8155,-23.3374,-37.8675,-24.246,-28.6101,-39.0798,0,-4.36811,-5.2778,-13.6547,-29.2354,-33.5903,-34.5013,-10.2733,-45.5825 0|1:63:41,11,0,11,0:41:1554:11,0,11,0:345,0,435,0:-22.7646,-14.2132,-134.013,-35.1069,-137.324,-158.267,0,-102.284,-123.223,-119.912,-35.1069,-137.324,-158.267,-123.223,-158.267 dDocent_Contig_8519 7 . C T 57.3556 . AB=0.147059;ABP=39.7976;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=231;DPB=231;DPRA=0.862944;EPP=13.8677;EPPR=493.763;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.969;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.969027;PAO=0;PQA=0;PQR=0;PRO=0;QA=187;QR=8668;RO=226;RPL=0;RPP=13.8677;RPPR=493.763;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=226;SRP=493.763;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:29,5:29:1081:5:187:-6.9574,0,-87.3504 0/0:29:29,0:29:1116:0:0:0,-8.72987,-100.742 0/0:50:50,0:50:1922:0:0:0,-15.0515,-173.224 0/0:34:34,0:34:1322:0:0:0,-10.235,-119.266 0/0:42:42,0:42:1614:0:0:0,-12.6433,-145.52 0/0:42:42,0:42:1613:0:0:0,-12.6433,-145.436 dDocent_Contig_8520 78 . T C 2178.32 . AB=0.365217;ABP=39.3022;AC=4;AF=0.333333;AN=12;AO=88;CIGAR=1X;DP=376;DPB=376;DPRA=0.922388;EPP=194.1;EPPR=626.223;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996516;PAO=0;PQA=0;PQR=0;PRO=0;QA=3361;QR=10633;RO=287;RPL=88;RPP=194.1;RPPR=626.223;RPR=0;RUN=1;SAF=88;SAP=194.1;SAR=0;SRF=287;SRP=626.223;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:101:87,14:87:3187:14:514:-16.1969,0,-256.631 0/0:79:75,4:75:2708:4:130:0,-11.7603,-231.928 0/1:46:34,12:34:1275:12:464:-28.2641,0,-101.185 0/0:67:67,0:67:2544:0:0:0,-20.169,-229.16 0/1:49:4,44:4:158:44:1711:-139.709,0,-0.00791322 0/1:34:20,14:20:761:14:542:-38.8907,0,-58.5819 dDocent_Contig_8521 37 . C A 11990.9 . AB=0.884726;ABP=449.126;AC=7;AF=0.583333;AN=12;AO=368;CIGAR=1X;DP=408;DPB=408;DPRA=0;EPP=802.112;EPPR=89.8692;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997283;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=14576;QR=1619;RO=40;RPL=0;RPP=802.112;RPPR=89.8692;RPR=368;RUN=1;SAF=368;SAP=802.112;SAR=0;SRF=40;SRP=89.8692;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:8,34:8:320:34:1326:-106.959,0,-16.524 1/1:61:0,61:0:0:61:2413:-217.333,-18.3628,0 0/1:117:11,106:11:442:106:4205:-343.205,0,-4.91442 0/1:53:8,45:8:325:45:1759:-142.579,0,-13.665 0/1:70:7,63:7:286:63:2513:-205.238,0,-5.04272 0/1:65:6,59:6:246:59:2360:-192.987,0,-2.95317 dDocent_Contig_8522 40 . A C 520.561 . AB=0.387755;ABP=8.37251;AC=2;AF=0.166667;AN=12;AO=21;CIGAR=1X;DP=160;DPB=160;DPRA=1.1;EPP=48.6112;EPPR=304.845;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.952381;PAIREDR=0.805755;PAO=0;PQA=0;PQR=0;PRO=0;QA=847;QR=5396;RO=139;RPL=0;RPP=48.6112;RPPR=304.845;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=139;SRP=304.845;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:19,1:19:758:1:37:0,-2.32277,-64.8458 0/0:41:40,1:40:1516:1:40:0,-8.34655,-132.698 0/1:26:10,16:10:387:16:647:-50.7366,0,-27.3575 0/1:23:20,3:20:768:3:123:-4.5411,0,-62.512 0/0:17:17,0:17:670:0:0:0,-5.11751,-60.6281 0/0:33:33,0:33:1297:0:0:0,-9.93399,-117.001 dDocent_Contig_8523 93 . C G 42.6485 . AB=0.16;ABP=28.1125;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=244;DPB=244;DPRA=0.615894;EPP=20.3821;EPPR=515.478;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.813559;PAO=0;PQA=0;PQR=0;PRO=0;QA=290;QR=8295;RO=236;RPL=3;RPP=4.09604;RPPR=3.93042;RPR=5;RUN=1;SAF=3;SAP=4.09604;SAR=5;SRF=113;SRP=3.93042;SRR=123;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:30,2:30:1057:2:74:0,-2.60708,-88.4128 0/1:25:21,4:21:725:4:144:-5.7877,0,-58.0429 0/0:35:35,0:35:1223:0:0:0,-10.536,-110.372 0/0:36:34,2:34:1173:2:72:0,-4.00044,-99.0303 0/0:54:54,0:54:1904:0:0:0,-16.2556,-171.636 0/0:62:62,0:62:2213:0:0:0,-18.6639,-199.433 dDocent_Contig_8525 53 . C G 635.044 . AB=0.209459;ABP=111.525;AC=2;AF=0.166667;AN=12;AO=37;CIGAR=1X;DP=375;DPB=375;DPRA=1.0625;EPP=83.3548;EPPR=736.968;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997041;PAO=0;PQA=0;PQR=0;PRO=0;QA=1464;QR=13465;RO=338;RPL=37;RPP=83.3548;RPPR=736.968;RPR=0;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=338;SRP=736.968;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:89:73,16:73:2916:16:646:-31.6834,0,-235.731 0/1:59:44,15:44:1737:15:583:-35.0429,0,-138.786 0/0:39:37,2:37:1489:2:74:0,-4.71474,-127.226 0/0:68:64,4:64:2599:4:161:0,-5.59514,-219.151 0/0:74:74,0:74:2913:0:0:0,-22.2762,-262.251 0/0:46:46,0:46:1811:0:0:0,-13.8474,-163.198 dDocent_Contig_8526 10 . C T 1594.05 . AB=0.470588;ABP=3.90444;AC=5;AF=0.416667;AN=12;AO=57;CIGAR=1X;DP=139;DPB=139;DPRA=0;EPP=126.784;EPPR=181.071;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.736842;PAIREDR=0.731707;PAO=0;PQA=0;PQR=0;PRO=0;QA=2293;QR=3321;RO=82;RPL=0;RPP=126.784;RPPR=181.071;RPR=57;RUN=1;SAF=57;SAP=126.784;SAR=0;SRF=82;SRP=181.071;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:15,18:15:611:18:724:-55.5481,0,-45.3935 0/1:23:13,10:13:531:10:394:-28.8936,0,-41.2127 0/1:12:5,7:5:205:7:284:-22.3214,0,-15.2226 0/1:30:19,11:19:771:11:445:-31.3752,0,-60.6785 0/1:21:11,10:11:443:10:405:-30.4888,0,-33.9043 0/0:20:19,1:19:760:1:41:0,-1.92603,-64.6238 dDocent_Contig_8527 7 . C T 2038.41 . AB=0.433862;ABP=10.1911;AC=5;AF=0.416667;AN=12;AO=83;CIGAR=1X;DP=217;DPB=217;DPRA=0;EPP=183.243;EPPR=293.988;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.915663;PAIREDR=0.873134;PAO=0;PQA=0;PQR=0;PRO=0;QA=3016;QR=5138;RO=134;RPL=0;RPP=183.243;RPPR=293.988;RPR=83;RUN=1;SAF=83;SAP=183.243;SAR=0;SRF=134;SRP=293.988;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:27:17,10:17:656:10:376:-26.0637,0,-51.2492 0/1:42:23,19:23:862:19:707:-51.3149,0,-65.2563 0/1:24:19,5:19:735:5:191:-10.3338,0,-59.2566 0/0:28:27,1:27:1035:1:35:0,-4.93021,-89.9586 0/1:46:21,25:21:812:25:860:-63.8522,0,-59.5577 0/1:50:27,23:27:1038:23:847:-61.4979,0,-78.6764 dDocent_Contig_8528 10 . C A 1039.23 . AB=0.14959;ABP=523.47;AC=2;AF=0.166667;AN=12;AO=96;CIGAR=1X;DP=1282;DPB=1282;DPRA=1.61633;EPP=211.472;EPPR=2576.21;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997468;PAO=0;PQA=0;PQR=0;PRO=0;QA=3727;QR=47325;RO=1185;RPL=0;RPP=211.472;RPPR=2576.21;RPR=96;RUN=1;SAF=96;SAP=211.472;SAR=0;SRF=1185;SRP=2576.21;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:152:133,19:133:5298:19:728:-20.0819,0,-430.913 0/1:336:282,54:282:11299:54:2089:-87.0634,0,-914.965 0/0:123:123,0:123:4894:0:0:0,-37.0267,-440.354 0/0:304:281,23:281:11201:23:910:0,-9.30725,-925.109 0/0:225:224,0:224:8981:0:0:0,-67.4307,-807.417 0/0:142:142,0:142:5652:0:0:0,-42.7463,-508.492 dDocent_Contig_8530 11 . T C 5892.42 . AB=0.211494;ABP=946.493;AC=5;AF=0.416667;AN=12;AO=281;CIGAR=1X;DP=1488;DPB=1488;DPRA=0;EPP=613.194;EPPR=2623.98;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11205;QR=48275;RO=1207;RPL=0;RPP=613.194;RPPR=2623.98;RPR=281;RUN=1;SAF=281;SAP=613.194;SAR=0;SRF=1207;SRP=2623.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:183:178,5:178:7129:5:200:0,-36.7086,-622.884 0/1:175:144,31:144:5750:31:1226:-57.9311,0,-464.627 0/1:173:153,20:153:6114:20:791:-19.4262,0,-497.947 0/1:282:236,46:236:9446:46:1847:-81.5499,0,-764.675 0/1:289:211,78:211:8425:78:3107:-192.714,0,-670.791 0/1:386:285,101:285:11411:101:4034:-246.843,0,-910.008 dDocent_Contig_8531 23 . C T 46.9698 . AB=0.121951;ABP=53.9075;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=280;DPB=280;DPRA=0.818182;EPP=18.2106;EPPR=595.822;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992674;PAO=0;PQA=0;PQR=0;PRO=0;QA=279;QR=10827;RO=273;RPL=0;RPP=18.2106;RPPR=595.822;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=273;SRP=595.822;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:32,1:32:1265:1:39:0,-6.03743,-110.219 0/0:53:53,0:53:2067:0:0:0,-15.9546,-186.215 0/0:21:21,0:21:848:0:0:0,-6.32163,-76.632 0/0:52:51,1:51:2049:1:38:0,-11.8563,-180.799 0/1:41:36,5:36:1412:5:202:-6.21985,0,-114.994 0/0:80:80,0:80:3186:0:0:0,-24.0824,-286.814 dDocent_Contig_8532 12 . T C 1610.36 . AB=0.209239;ABP=273.241;AC=3;AF=0.25;AN=12;AO=89;CIGAR=1X;DP=702;DPB=702;DPRA=0;EPP=196.271;EPPR=1308.07;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3533;QR=22819;RO=601;RPL=0;RPP=196.271;RPPR=1308.07;RPR=89;RUN=1;SAF=89;SAP=196.271;SAR=0;SRF=601;SRP=1308.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:104:100,4:100:3811:4:161:0,-16.4318,-328.201 0/0:137:130,4:130:4967:4:162:0,-25.7748,-432.065 0/1:168:135,25:135:5121:25:1002:-41.9176,0,-412.328 0/0:93:88,4:88:3326:4:164:0,-12.7068,-284.362 0/1:88:60,28:60:2259:28:1097:-72.5241,0,-177.027 0/1:112:88,24:88:3335:24:947:-51.8166,0,-266.559 dDocent_Contig_8534 46 . A G 37.5619 . AB=0.119048;ABP=55.9529;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=309;DPB=309;DPRA=0.831897;EPP=26.8965;EPPR=641.452;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.454545;PAIREDR=0.40604;PAO=0;PQA=0;PQR=0;PRO=0;QA=434;QR=11923;RO=298;RPL=0;RPP=26.8965;RPPR=641.452;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=298;SRP=650.109;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:46,2:46:1832:2:81:0,-6.76371,-157.408 0/0:53:51,2:51:2069:2:82:0,-8.17491,-178.605 0/1:42:37,5:37:1500:5:195:-5.279,0,-122.595 0/0:50:48,2:48:1902:2:76:0,-7.83669,-164.176 0/0:56:56,0:56:2205:0:0:0,-16.8577,-198.634 0/0:60:60,0:60:2415:0:0:0,-18.0618,-217.495 dDocent_Contig_8535 28 . A C 247.549 . AB=0.191176;ABP=59.3408;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=240;DPB=240;DPRA=0.790698;EPP=31.2394;EPPR=495.935;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.846154;PAIREDR=0.555066;PAO=0;PQA=0;PQR=0;PRO=0;QA=527;QR=9026;RO=227;RPL=0;RPP=31.2394;RPPR=495.935;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=227;SRP=495.935;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1309:0:0:0,-9.93399,-118.077 0/0:41:41,0:41:1600:0:0:0,-12.3422,-144.237 0/0:51:51,0:51:2021:0:0:0,-15.3525,-182.085 0/0:47:47,0:47:1883:0:0:0,-14.1484,-169.67 0/1:21:19,2:19:768:2:82:-1.45805,0,-63.1191 0/1:47:36,11:36:1445:11:445:-26.2575,0,-116.152 dDocent_Contig_8536 13 . T C 30.1864 . AB=0.125;ABP=32.3252;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=168;DPB=168;DPRA=0.833333;EPP=9.52472;EPPR=361.303;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.648485;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=6605;RO=165;RPL=0;RPP=9.52472;RPPR=361.303;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=165;SRP=361.303;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:21,3:21:853:3:123:-4.24007,0,-69.8557 0/0:27:27,0:27:1094:0:0:0,-8.12781,-98.744 0/0:27:27,0:27:1090:0:0:0,-8.12781,-98.3865 0/0:38:38,0:38:1518:0:0:0,-11.4391,-136.862 0/0:25:25,0:25:981:0:0:0,-7.52575,-88.5878 0/0:27:27,0:27:1069:0:0:0,-8.12781,-96.497 dDocent_Contig_8537 43 . T C 144.92 . AB=0.466667;ABP=3.15506;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=162;DPB=162;DPRA=0.551948;EPP=24.725;EPPR=333.074;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.940789;PAO=0;PQA=0;PQR=0;PRO=0;QA=360;QR=6090;RO=152;RPL=0;RPP=24.725;RPPR=333.074;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=152;SRP=333.074;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:1038:0:0:0,-7.82678,-93.7146 0/0:51:51,0:51:2030:0:0:0,-15.3525,-182.883 0/0:27:25,2:25:1003:2:81:0,-0.442076,-82.875 0/0:43:42,1:42:1692:1:40:0,-8.94861,-148.5 0/1:13:7,6:7:286:6:199:-14.3147,0,-22.2014 0/1:2:1,1:1:41:1:40:-3.39362,0,-3.49251 dDocent_Contig_8538 30 . G T 8065.03 . AB=0.519849;ABP=4.82054;AC=5;AF=0.416667;AN=12;AO=275;CIGAR=1X;DP=551;DPB=551;DPRA=4.80909;EPP=600.165;EPPR=600.165;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10824;QR=10977;RO=275;RPL=0;RPP=600.165;RPPR=600.165;RPR=275;RUN=1;SAF=275;SAP=600.165;SAR=0;SRF=275;SRP=600.165;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:131:76,55:76:3062:55:2176:-156.581,0,-236.221 0/1:140:36,103:36:1433:103:4043:-321.617,0,-86.982 0/1:90:41,49:41:1646:49:1932:-146.998,0,-121.276 0/1:139:75,64:75:2974:64:2515:-184.659,0,-225.911 0/0:22:22,0:22:873:0:0:0,-6.62266,-78.8749 0/1:29:25,4:25:989:4:158:-5.87061,0,-80.5762 dDocent_Contig_8539 9 . G A 1396.73 . AB=0.227564;ABP=204.15;AC=5;AF=0.416667;AN=12;AO=71;CIGAR=1X;DP=350;DPB=350;DPRA=1.64211;EPP=157.185;EPPR=608.851;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.989247;PAO=0;PQA=0;PQR=0;PRO=0;QA=2679;QR=10490;RO=279;RPL=0;RPP=157.185;RPPR=608.851;RPR=71;RUN=1;SAF=71;SAP=157.185;SAR=0;SRF=279;SRP=608.851;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:68:60,8:60:2227:8:308:-7.61232,0,-180.179 0/1:70:56,14:56:2119:14:529:-26.8793,0,-169.869 0/0:38:38,0:38:1449:0:0:0,-11.4391,-130.689 0/1:48:39,9:39:1483:9:336:-16.1394,0,-119.296 0/1:90:59,31:59:2238:31:1160:-77.6013,0,-174.548 0/1:36:27,9:27:974:9:346:-20.6623,0,-77.1147 dDocent_Contig_8540 15 . T G 146.069 . AB=0.104;ABP=343.532;AC=2;AF=0.166667;AN=12;AO=32;CIGAR=1X;DP=809;DPB=809;DPRA=0.930788;EPP=72.4974;EPPR=1677.22;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=59.9844;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.992218;PAO=0;PQA=0;PQR=0;PRO=0;QA=1265;QR=27713;RO=771;RPL=0;RPP=72.4974;RPPR=1677.22;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=771;SRP=1677.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:119:108,11:108:3883:11:444:-4.49361,0,-313.777 0/0:164:162,0:162:5908:0:0:0,-48.7669,-531.438 0/0:90:90,0:90:3210:0:0:0,-27.0927,-289.085 0/0:140:134,6:134:4858:6:243:0,-19.8962,-415.056 0/0:165:163,0:163:5824:0:0:0,-49.0679,-523.802 0/1:131:114,15:114:4030:15:578:-13.3349,0,-323.829 dDocent_Contig_8541 7 . C G 443.764 . AB=0.153439;ABP=397.345;AC=1;AF=0.0833333;AN=12;AO=111;CIGAR=1X;DP=3026;DPB=3026;DPRA=0.679267;EPP=244.044;EPPR=6276.39;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999308;PAO=0;PQA=0;PQR=0;PRO=0;QA=3451;QR=110110;RO=2889;RPL=0;RPP=244.044;RPPR=6276.39;RPR=111;RUN=1;SAF=111;SAP=244.044;SAR=0;SRF=2889;SRP=6276.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:317:317,0:317:12009:0:0:0,-95.4265,-1080.34 0/0:421:406,14:406:15554:14:439:0,-86.7543,-1359.32 0/0:227:207,18:207:7927:18:575:0,-15.9409,-661.189 0/1:378:316,58:316:12043:58:1761:-45.8993,0,-970.562 0/0:717:678,21:678:25822:21:676:0,-149.622,-2261.39 0/0:966:965,0:965:36755:0:0:0,-290.494,-3305.61 dDocent_Contig_8542 8 . C T 675.179 . AB=0.158249;ABP=304.304;AC=4;AF=0.333333;AN=12;AO=52;CIGAR=1X;DP=401;DPB=401;DPRA=0;EPP=115.927;EPPR=754.34;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.99711;PAO=0;PQA=0;PQR=0;PRO=0;QA=2000;QR=13278;RO=346;RPL=0;RPP=115.927;RPPR=754.34;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=346;SRP=754.34;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:49:43,5:43:1642:5:194:-2.99408,0,-133.207 0/0:60:56,3:56:2110:3:117:0,-7.24005,-179.216 0/0:44:41,2:41:1578:2:76:0,-6.11596,-135.071 0/1:65:59,6:59:2261:6:234:-1.86415,0,-184.141 0/1:102:88,14:88:3402:14:540:-18.2406,0,-275.602 0/1:81:59,22:59:2285:22:839:-51.4486,0,-181.478 dDocent_Contig_8543 23 . C T 1025.33 . AB=0.204082;ABP=40.2799;AC=4;AF=0.333333;AN=12;AO=11;CIGAR=1X2M1X;DP=208;DPB=208;DPRA=1.02857;EPP=26.8965;EPPR=333.074;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.909091;PAIREDR=0.75;PAO=0;PQA=0;PQR=0;PRO=0;QA=422;QR=6004;RO=152;RPL=0;RPP=26.8965;RPPR=333.074;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=152;SRP=333.074;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:49:15,23,10:15:588:23,10:897,383:-69.2217,0,-41.4382,-42.3133,-16.9387,-87.6587 0|1:30:21,9,0:21:836:9,0:349,0:-22.7376,0,-66.5247,-29.0592,-69.234,-97.9027 0|0:23:22,0,1:22:872:0,1:0,39:0,-6.62266,-78.4036,-3.02713,-75.198,-74.897 0|1:42:36,6,0:36:1423:6,0:233,0:-8.69526,0,-115.687,-19.5323,-117.493,-136.637 0|0:35:34,1,0:34:1353:1,0:40,0:0,-6.54037,-118.041,-10.235,-118.342,-121.637 0|1:29:24,5,0:24:932:5,0:194,0:-9.1002,0,-75.4562,-16.3249,-76.9614,-92.8986 dDocent_Contig_8544 7 . C A 2497 . AB=0.401674;ABP=23.0805;AC=6;AF=0.5;AN=12;AO=96;CIGAR=1X;DP=239;DPB=239;DPRA=0;EPP=211.472;EPPR=313.531;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.739583;PAIREDR=0.664336;PAO=0;PQA=0;PQR=0;PRO=0;QA=3676;QR=5497;RO=143;RPL=0;RPP=211.472;RPPR=313.531;RPR=96;RUN=1;SAF=96;SAP=211.472;SAR=0;SRF=143;SRP=313.531;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:20,10:20:769:10:374:-24.9791,0,-60.5069 0/1:58:39,19:39:1495:19:729:-48.4802,0,-117.366 0/1:28:20,8:20:778:8:309:-19.7441,0,-61.9192 0/1:42:29,13:29:1120:13:498:-32.5229,0,-88.4589 0/1:40:19,21:19:724:21:814:-61.5441,0,-53.4478 0/1:41:16,25:16:611:25:952:-73.6514,0,-42.9859 dDocent_Contig_8545 12 . A G 103.944 . AB=0.140351;ABP=67.0497;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=254;DPB=254;DPRA=1.4467;EPP=20.3821;EPPR=537.193;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9715;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.471545;PAO=0;PQA=0;PQR=0;PRO=0;QA=319;QR=9742;RO=246;RPL=0;RPP=20.3821;RPPR=537.193;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=246;SRP=537.193;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:40,0:40:1611:0:0:0,-12.0412,-145.221 0/1:57:49,8:49:1959:8:319:-11.9172,0,-159.33 0/0:51:51,0:51:1999:0:0:0,-15.3525,-180.099 0/0:25:25,0:25:988:0:0:0,-7.52575,-89.2152 0/0:56:56,0:56:2205:0:0:0,-16.8577,-198.62 0/0:25:25,0:25:980:0:0:0,-7.52575,-88.495 dDocent_Contig_8546 18 . A T 43.162 . AB=0.111111;ABP=73.9451;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=287;DPB=287;DPRA=1.1588;EPP=16.0391;EPPR=613.194;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.825623;PAO=0;PQA=0;PQR=0;PRO=0;QA=238;QR=11179;RO=281;RPL=0;RPP=16.0391;RPPR=613.194;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=281;SRP=613.194;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:48,6:48:1913:6:238:-5.53803,0,-156.113 0/0:60:60,0:60:2393:0:0:0,-18.0618,-215.524 0/0:45:45,0:45:1807:0:0:0,-13.5463,-162.837 0/0:33:33,0:33:1325:0:0:0,-9.93399,-119.508 0/0:45:45,0:45:1806:0:0:0,-13.5463,-162.75 0/0:50:50,0:50:1935:0:0:0,-15.0515,-174.356 dDocent_Contig_8547 11 . C A 1112.25 . AB=0.216;ABP=178.153;AC=4;AF=0.333333;AN=12;AO=59;CIGAR=1X2M1X;DP=337;DPB=337;DPRA=0;EPP=131.127;EPPR=602.337;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.966102;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2335;QR=10870;RO=276;RPL=0;RPP=131.127;RPPR=602.337;RPR=59;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=276;SRP=602.337;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:39:37,2:37:1451:2:80:0,-4.14859,-123.257 0|0:48:43,3:43:1686:3:118:0,-3.24438,-140.963 0|1:124:111,13:111:4384:13:513:-9.1896,0,-357.208 0|1:36:26,10:26:1024:10:395:-25.071,0,-81.6226 0|1:34:30,4:30:1170:4:157:-4.2714,0,-95.3492 0|1:56:29,27:29:1155:27:1072:-79.9143,0,-87.3786 dDocent_Contig_8548 59 . A G 4798.73 . AB=0.371369;ABP=72.2812;AC=4;AF=0.333333;AN=12;AO=179;CIGAR=1X;DP=600;DPB=600;DPRA=2.04237;EPP=391.704;EPPR=915.029;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7013;QR=16460;RO=420;RPL=179;RPP=391.704;RPPR=915.029;RPR=0;RUN=1;SAF=179;SAP=391.704;SAR=0;SRF=420;SRP=915.029;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:134:93,41:93:3631:41:1599:-103.825,0,-286.503 0/1:137:53,84:53:2064:84:3293:-255.208,0,-144.718 0/1:116:88,27:88:3436:27:1061:-60.9684,0,-274.511 0/0:113:113,0:113:4436:0:0:0,-34.0164,-399.211 0/0:5:5,0:5:200:0:0:0,-1.50515,-18.3795 0/1:95:68,27:68:2693:27:1060:-67.0942,0,-213.912 dDocent_Contig_8549 98 . N A 499.807 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=18;CIGAR=1X;DP=18;DPB=18;DPRA=0;EPP=42.0968;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=58.5556;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0.222222;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=531;QR=0;RO=0;RPL=18;RPP=42.0968;RPPR=0;RPR=0;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:8:0,8:0:0:8:258:-23.5361,-2.40824,0 1/1:1:0,1:0:0:1:20:-1.99996,-0.30103,0 1/1:2:0,2:0:0:2:59:-5.60384,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:6:0,6:0:0:6:160:-14.6621,-1.80618,0 dDocent_Contig_8550 24 . T G 600.579 . AB=0.217391;ABP=98.7439;AC=3;AF=0.25;AN=12;AO=32;CIGAR=1X;DP=268;DPB=268;DPRA=1.64828;EPP=72.4974;EPPR=515.478;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.5;PAO=0;PQA=0;PQR=0;PRO=0;QA=1256;QR=9339;RO=236;RPL=0;RPP=72.4974;RPPR=515.478;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=236;SRP=515.478;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:51:50,1:50:1976:1:41:0,-11.258,-173.948 0/0:50:49,1:49:1944:1:40:0,-11.0558,-171.165 0/0:29:29,0:29:1171:0:0:0,-8.72987,-105.667 0/1:36:31,5:31:1207:5:195:-7.08479,0,-98.0654 0/1:50:42,8:42:1664:8:321:-14.2055,0,-134.934 0/1:52:35,17:35:1377:17:659:-43.9894,0,-108.531 dDocent_Contig_8551 1 . N G 71.8465 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=77;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:77:-7.18411,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_8552 18 . C T 1096.34 . AB=0.545455;ABP=4.19474;AC=1;AF=0.1;AN=10;AO=43;CIGAR=1X;DP=273;DPB=273;DPRA=1.35556;EPP=96.3836;EPPR=502.449;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1738;QR=9227;RO=230;RPL=0;RPP=96.3836;RPPR=502.449;RPR=43;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=230;SRP=502.449;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:35,1:35:1390:1:41:0,-6.74251,-121.257 0/0:82:82,0:82:3297:0:0:0,-24.6845,-296.773 0/1:66:30,36:30:1207:36:1454:-111.236,0,-89.033 0/0:81:75,6:75:3011:6:243:0,-2.13525,-248.818 ./.:.:.:.:.:.:.:. 0/0:8:8,0:8:322:0:0:0,-2.40824,-29.3472 dDocent_Contig_8553 23 . C T 307.861 . AB=0.217391;ABP=50.8771;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=295;DPB=295;DPRA=1.52655;EPP=35.5824;EPPR=608.851;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=586;QR=11039;RO=279;RPL=0;RPP=35.5824;RPPR=608.851;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=279;SRP=608.851;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:44,0:44:1737:0:0:0,-13.2453,-156.543 0/0:38:38,0:38:1525:0:0:0,-11.4391,-137.49 0/0:75:75,0:75:2933:0:0:0,-22.5772,-264.077 0/0:9:9,0:9:359:0:0:0,-2.70927,-32.6722 0/1:69:54,15:54:2165:15:586:-32.309,0,-174.249 0/0:60:59,0:59:2320:0:0:0,-17.7608,-208.557 dDocent_Contig_8554 11 . G A 3121.12 . AB=0.0356506;ABP=1053.68;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=2X3M;DP=1250;DPB=1252.8;DPRA=0;EPP=46.4397;EPPR=1648.99;GTI=0;LEN=1;MEANALT=7;MQM=55.15;MQMR=59.4142;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.976253;PAO=0;PQA=0;PQR=0;PRO=0;QA=762;QR=29349;RO=758;RPL=0;RPP=46.4397;RPPR=1648.99;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=758;SRP=1648.99;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:219:145,13,21,0,19:145:5595:13,21,0,19:506,802,0,742:-22.1444,-24.5514,-479.897,0,-418.017,-452.937,-65.7938,-483.811,-459.259,-525.052,-4.79927,-422.819,-398.267,-464.06,-458.341 0|0:264:165,22,31,0,33:165:6376:22,31,0,33:861,1222,0,1323:-58.9317,-38.0176,-554.967,-14.0671,-467.051,-528.302,-108.602,-561.589,-537.634,-632.172,0,-452.993,-429.037,-523.576,-513.642 0|0:155:94,14,15,2,16:94:3624:14,15,2,16:546,594,74,618:-21.5549,-4.97177,-298.25,-1.4466,-254.062,-294.425,-43.8126,-296.425,-292.901,-340.701,0,-252.612,-249.088,-291.451,-292.674 0|0:206:143,11,14,0,27:143:5574:11,14,0,27:425,549,0,1090:-46.8198,-54.9643,-506.627,-44.7181,-464.79,-495.479,-89.8671,-509.938,-499.693,-544.841,0,-420.081,-409.836,-454.984,-446.856 0|0:225:104,38,17,13,43:104:4042:38,17,13,43:1482,654,494,1741:-105.581,-15.0725,-334.666,-83.1948,-292.412,-409.108,-96.4786,-305.695,-373.816,-423.596,0,-209.218,-277.339,-290.623,-318.088 0|0:181:107,24,10,5,32:107:4138:24,10,5,32:892,393,194,1269:-68.2998,-27.5232,-360.047,-68.1834,-334.946,-404.925,-84.6075,-351.369,-392.033,-422.854,0,-266.764,-307.427,-323.85,-330.12 dDocent_Contig_8555 170 . G A 733.711 . AB=0.394366;ABP=9.89173;AC=2;AF=0.166667;AN=12;AO=29;CIGAR=1X;DP=198;DPB=198;DPRA=1.27586;EPP=65.983;EPPR=369.989;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.976331;PAO=0;PQA=0;PQR=0;PRO=0;QA=1121;QR=6746;RO=169;RPL=29;RPP=65.983;RPPR=369.989;RPR=0;RUN=1;SAF=0;SAP=65.983;SAR=29;SRF=0;SRP=369.989;SRR=169;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:790:0:0:0,-6.0206,-71.4145 0/0:40:39,1:39:1578:1:40:0,-8.04552,-138.257 0/0:24:24,0:24:931:0:0:0,-7.22472,-84.084 0/0:43:43,0:43:1717:0:0:0,-12.9443,-154.748 0/1:37:23,14:23:929:14:550:-38.7053,0,-72.7743 0/1:34:20,14:20:801:14:531:-37.8876,0,-62.172 dDocent_Contig_8556 107 . N C 267.059 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0.444444;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=286;QR=0;RO=0;RPL=0;RPP=22.5536;RPPR=0;RPR=9;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:36:-3.59827,-0.30103,0 1/1:8:0,8:0:0:8:250:-22.8055,-2.40824,0 dDocent_Contig_8557 9 . C T 12552.2 . AB=0.0824742;ABP=149.887;AC=0;AF=0;AN=12;AO=10;CIGAR=1X3M1X;DP=668;DPB=668;DPRA=0;EPP=24.725;EPPR=335.246;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.986928;PAO=0;PQA=0;PQR=0;PRO=0;QA=383;QR=5977;RO=153;RPL=0;RPP=24.725;RPPR=335.246;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=153;SRP=335.246;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:97:18,54,8,16:18:718:54,8,16:2096,306,613:-166.794,0,-42.8838,-147.104,-34.0321,-203.832,-121.911,-8.8401,-155.938,-176.23 0|0:72:5,60,2,4:5:186:60,2,4:2340,77,150:-193.684,-2.84291,0,-188.867,-11.738,-203.486,-182.903,-5.77609,-191.802,-196.92 0|0:107:16,88,0,2:16:622:88,0,2:3382,0,77:-272.8,0,-24.6191,-277.617,-51.1098,-328.728,-271.294,-44.7878,-322.406,-321.804 0|0:140:39,61,0,40:39:1519:61,0,40:2353,0,1547:-183.683,-2.20431,-108.684,-195.423,-127.047,-320.265,-68.374,0,-193.217,-181.176 0|0:159:43,6,0,108:43:1694:6,0,108:224,0,4217:-333.71,-328.317,-465.877,-346.654,-467.683,-486.02,0,-121.046,-139.382,-106.871 0|0:93:32,22,0,39:32:1238:22,0,39:847,0,1503:-113.767,-53.8596,-148.923,-123.4,-155.545,-225.086,0,-32.1461,-101.686,-89.9459 dDocent_Contig_8558 17 . A G 15263.3 . AB=0.525773;ABP=8.60688;AC=6;AF=0.5;AN=12;AO=510;CIGAR=1X;DP=970;DPB=970;DPRA=0;EPP=1110.46;EPPR=1001.89;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9783;NS=6;NUMALT=1;ODDS=0;PAIRED=0.933333;PAIREDR=0.963043;PAO=0;PQA=0;PQR=0;PRO=0;QA=20325;QR=18341;RO=460;RPL=0;RPP=1110.46;RPPR=1001.89;RPR=510;RUN=1;SAF=510;SAP=1110.46;SAR=0;SRF=460;SRP=1001.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:159:94,65:94:3778:65:2571:-183.665,0,-292.162 0/1:184:89,95:89:3495:95:3767:-283.657,0,-259.21 0/1:115:71,44:71:2817:44:1760:-123.999,0,-219.021 0/1:128:64,64:64:2563:64:2543:-190.475,0,-192.272 0/1:197:79,118:79:3155:118:4714:-364.872,0,-224.716 0/1:187:63,124:63:2533:124:4970:-390.885,0,-171.768 dDocent_Contig_8559 30 . T A 892.634 . AB=0.327103;ABP=30.793;AC=3;AF=0.25;AN=12;AO=38;CIGAR=1X;DP=173;DPB=173;DPRA=2.94545;EPP=85.5263;EPPR=296.159;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.921053;PAIREDR=0.955556;PAO=0;PQA=0;PQR=0;PRO=0;QA=1503;QR=5400;RO=135;RPL=0;RPP=85.5263;RPPR=296.159;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=135;SRP=296.159;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:11:11,0:11:444:0:0:0,-3.31133,-40.3162 0/1:38:19,19:19:763:19:761:-57.374,0,-57.5537 0/0:12:11,1:11:441:1:27:0,-0.912577,-37.3458 0/1:34:24,10:24:960:10:395:-25.6727,0,-76.4662 0/0:43:41,2:41:1640:2:80:0,-5.3525,-140.242 0/1:35:29,6:29:1152:6:240:-11.4385,0,-93.4287 dDocent_Contig_8560 74 . A G 1646.97 . AB=0.283186;ABP=49.1493;AC=7;AF=0.583333;AN=12;AO=60;CIGAR=1X;DP=141;DPB=141;DPRA=0;EPP=133.299;EPPR=178.9;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.816667;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2270;QR=3110;RO=81;RPL=60;RPP=133.299;RPPR=178.9;RPR=0;RUN=1;SAF=60;SAP=133.299;SAR=0;SRF=81;SRP=178.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:14,11:14:525:11:422:-30.8074,0,-40.0649 0/1:37:27,10:27:1014:10:385:-23.8683,0,-80.4314 0/1:11:10,1:10:393:1:38:-0.485939,0,-32.4153 0/1:27:24,3:24:945:3:121:-3.15239,0,-77.2305 1/1:28:0,28:0:0:28:1061:-95.7952,-8.42884,0 0/1:13:6,7:6:233:7:243:-18.2882,0,-17.424 dDocent_Contig_8561 15 . T G 2534.57 . AB=0.260465;ABP=217.309;AC=5;AF=0.416667;AN=12;AO=125;CIGAR=1X;DP=652;DPB=652;DPRA=0;EPP=265.828;EPPR=1145.2;GTI=0;LEN=1;MEANALT=1.16667;MQM=55.88;MQMR=59.9449;NS=6;NUMALT=1;ODDS=0;PAIRED=0.816;PAIREDR=0.998099;PAO=0;PQA=0;PQR=0;PRO=0;QA=4969;QR=20980;RO=526;RPL=0;RPP=274.444;RPPR=1145.2;RPR=125;RUN=1;SAF=124;SAP=265.828;SAR=1;SRF=526;SRP=1145.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:14,19:14:565:19:764:-58.72,0,-40.3999 0/1:105:86,19:86:3444:19:751:-35.0091,0,-278.392 0/1:25:11,13:11:440:13:526:-39.6441,0,-32.3374 0/1:80:46,34:46:1837:34:1357:-96.4347,0,-141.455 0/1:187:160,27:160:6382:27:1071:-32.8712,0,-517.812 0/0:222:209,13:209:8312:13:500:0,-22.1879,-702.971 dDocent_Contig_8562 26 . G A 261.643 . AB=0.168421;ABP=93.7321;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=222;DPB=222;DPRA=1.49606;EPP=37.7539;EPPR=450.334;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=636;QR=8032;RO=206;RPL=0;RPP=37.7539;RPPR=450.334;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=206;SRP=450.334;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:32,0:32:1240:0:0:0,-9.63296,-111.867 0/1:51:46,5:46:1800:5:196:-2.6614,0,-146.871 0/1:44:33,11:33:1313:11:440:-26.7092,0,-105.185 0/0:40:40,0:40:1551:0:0:0,-12.0412,-139.83 0/0:31:31,0:31:1204:0:0:0,-9.33193,-108.627 0/0:24:24,0:24:924:0:0:0,-7.22472,-83.4586 dDocent_Contig_8563 28 . C T 107.412 . AB=0.162791;ABP=45.4803;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=265;DPB=265;DPRA=0.968468;EPP=18.2106;EPPR=563.25;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.857143;PAIREDR=0.468992;PAO=0;PQA=0;PQR=0;PRO=0;QA=276;QR=10287;RO=258;RPL=0;RPP=18.2106;RPPR=563.25;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=258;SRP=563.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:48,0:48:1940:0:0:0,-14.4494,-174.792 0/0:45:45,0:45:1755:0:0:0,-13.5463,-158.165 0/0:46:46,0:46:1819:0:0:0,-13.8474,-163.91 0/0:58:58,0:58:2323:0:0:0,-17.4597,-209.23 0/0:25:25,0:25:1011:0:0:0,-7.52575,-91.2807 0/1:43:36,7:36:1439:7:276:-12.264,0,-116.814 dDocent_Contig_8564 11 . A G 136.725 . AB=0.136986;ABP=86.5674;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=957;DPB=957;DPRA=0.412896;EPP=24.725;EPPR=2059.39;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=409;QR=37870;RO=947;RPL=0;RPP=24.725;RPPR=2059.39;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=947;SRP=2059.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:664:0:0:0,-5.11751,-60.0905 0/0:100:100,0:100:4001:0:0:0,-30.103,-360.07 0/1:73:63,10:63:2543:10:409:-15.1954,0,-207.022 0/0:78:78,0:78:3145:0:0:0,-23.4803,-283.116 0/0:402:402,0:402:16045:0:0:0,-121.014,-1442.75 0/0:287:287,0:287:11472:0:0:0,-86.3956,-1031.68 dDocent_Contig_8565 9 . C T 515.746 . AB=0.193333;ABP=125.539;AC=2;AF=0.166667;AN=12;AO=36;CIGAR=1X;DP=425;DPB=425;DPRA=1.3319;EPP=81.1833;EPPR=847.713;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.944444;PAIREDR=0.953728;PAO=0;PQA=0;PQR=0;PRO=0;QA=1374;QR=14837;RO=389;RPL=0;RPP=81.1833;RPPR=847.713;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=389;SRP=847.713;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:76:64,12:64:2431:12:450:-17.9667,0,-196.113 0/0:88:84,4:84:3173:4:155:0,-12.1652,-271.401 0/1:74:57,17:57:2194:17:653:-36.8297,0,-175.405 0/0:71:68,3:68:2595:3:116:0,-10.5554,-222.928 0/0:60:60,0:60:2293:0:0:0,-18.0618,-206.589 0/0:56:56,0:56:2151:0:0:0,-16.8577,-193.814 dDocent_Contig_8566 9 . C A 17667.6 . AB=0.44746;ABP=37.4652;AC=6;AF=0.5;AN=12;AO=643;CIGAR=1X;DP=1437;DPB=1437;DPRA=0;EPP=1399.27;EPPR=1724.99;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0.919129;PAIREDR=0.900378;PAO=0;PQA=0;PQR=0;PRO=0;QA=24557;QR=30486;RO=793;RPL=0;RPP=1399.27;RPPR=1724.99;RPR=643;RUN=1;SAF=643;SAP=1399.27;SAR=0;SRF=793;SRP=1724.99;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:243:197,46:197:7578:46:1775:-86.8539,0,-608.69 0/1:251:180,71:180:6916:71:2706:-168.169,0,-546.753 0/1:146:83,63:83:3180:63:2412:-173.337,0,-242.402 0/1:211:121,90:121:4657:90:3444:-246.573,0,-355.651 0/1:282:126,155:126:4846:155:5902:-446.156,0,-351.187 0/1:304:86,218:86:3309:218:8318:-656.892,0,-206.435 dDocent_Contig_8567 15 . C A 468.026 . AB=0.25;ABP=46.4397;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=502;DPB=502;DPRA=0.947867;EPP=46.4397;EPPR=1049.66;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997925;PAO=0;PQA=0;PQR=0;PRO=0;QA=801;QR=19215;RO=482;RPL=0;RPP=46.4397;RPPR=1049.66;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=482;SRP=1049.66;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:84:84,0:84:3386:0:0:0,-25.2865,-304.775 0/0:76:76,0:76:3038:0:0:0,-22.8783,-273.488 0/0:48:48,0:48:1928:0:0:0,-14.4494,-173.717 0/0:72:72,0:72:2872:0:0:0,-21.6742,-258.579 0/1:80:60,20:60:2376:20:801:-48.3255,0,-189.905 0/0:142:142,0:142:5615:0:0:0,-42.7463,-505.177 dDocent_Contig_8568 25 . G A 4803.14 . AB=0.522293;ABP=4.36574;AC=6;AF=0.5;AN=12;AO=164;CIGAR=1X9M;DP=314;DPB=311.3;DPRA=0;EPP=359.132;EPPR=307.016;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.964286;PAO=0;PQA=0;PQR=0;PRO=0;QA=6472;QR=5400;RO=140;RPL=0;RPP=359.132;RPPR=307.016;RPR=164;RUN=1;SAF=164;SAP=359.132;SAR=0;SRF=140;SRP=307.016;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:47:11,2,34:11:427:2,34:76,1318:-104.961,-102.04,-136.523,0,-28.8601,-24.8568 0|1:49:17,0,32:17:664:0,32:0,1259:-98.8342,-103.952,-158.539,0,-54.9784,-45.3455 0|1:64:15,4,45:15:583:4,45:152,1796:-143.416,-135.47,-182.172,0,-35.4547,-34.3692 0|1:63:28,3,31:28:1075:3,31:121,1224:-92.2695,-90.7233,-178.056,0,-78.2492,-78.8932 0|1:52:46,0,6:46:1778:0,6:0,233:-5.68417,-19.5315,-165.564,0,-146.42,-144.614 0|1:39:23,0,16:23:873:0,16:0,642:-46.3708,-53.2945,-124.863,0,-71.9608,-67.1444 dDocent_Contig_8569 11 . A C 1027.58 . AB=0.207627;ABP=178.237;AC=3;AF=0.25;AN=12;AO=50;CIGAR=1X;DP=344;DPB=344;DPRA=3.91026;EPP=111.584;EPPR=641.423;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2018;QR=11765;RO=294;RPL=0;RPP=111.584;RPPR=641.423;RPR=50;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=294;SRP=641.423;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:83:52,31:52:2071:31:1248:-87.605,0,-161.586 0/1:91:79,12:79:3181:12:486:-16.6979,0,-258.957 0/0:69:68,1:68:2751:1:40:0,-16.7754,-243.696 0/1:62:56,6:56:2207:6:244:-3.67497,0,-180.133 0/0:17:17,0:17:691:0:0:0,-5.11751,-62.5183 0/0:22:22,0:22:864:0:0:0,-6.62266,-78.0678 dDocent_Contig_8570 7 . C A 1349.83 . AB=0.40458;ABP=13.3704;AC=5;AF=0.416667;AN=12;AO=54;CIGAR=1X;DP=153;DPB=153;DPRA=0;EPP=120.27;EPPR=217.986;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.989899;PAO=0;PQA=0;PQR=0;PRO=0;QA=2059;QR=3787;RO=99;RPL=0;RPP=120.27;RPPR=217.986;RPR=54;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=99;SRP=217.986;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:13:7,6:7:262:6:218:-16.0552,0,-20.0224 0/1:42:21,21:21:810:21:809:-60.4921,0,-60.5816 0/0:22:21,1:21:794:1:38:0,-2.82539,-67.9813 0/1:23:13,10:13:500:10:381:-27.7209,0,-38.4229 0/1:35:28,7:28:1072:7:266:-13.7657,0,-86.2475 0/1:18:9,9:9:349:9:347:-26.1713,0,-26.3522 dDocent_Contig_8571 11 . T C 78.0276 . AB=0.185185;ABP=26.2531;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=202;DPB=202;DPRA=1.14894;EPP=20.3821;EPPR=424.276;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.979381;PAO=0;PQA=0;PQR=0;PRO=0;QA=326;QR=7702;RO=194;RPL=0;RPP=20.3821;RPPR=424.276;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=194;SRP=424.276;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:11:9,2:9:358:2:82:-4.46835,0,-29.2689 0/1:16:13,3:13:517:3:122:-6.55601,0,-42.059 0/0:12:12,0:12:478:0:0:0,-3.61236,-43.3674 0/0:30:30,0:30:1186:0:0:0,-9.0309,-107.017 0/0:81:78,3:78:3091:3:122:0,-13.0109,-266.906 0/0:52:52,0:52:2072:0:0:0,-15.6536,-186.663 dDocent_Contig_8572 59 . T C 5814.32 . AB=0.560209;ABP=15.0387;AC=6;AF=0.5;AN=12;AO=214;CIGAR=1X;DP=382;DPB=382;DPRA=0;EPP=467.705;EPPR=367.818;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.761682;PAIREDR=0.738095;PAO=0;PQA=0;PQR=0;PRO=0;QA=7844;QR=6201;RO=168;RPL=103;RPP=3.65971;RPPR=3.21711;RPR=111;RUN=1;SAF=103;SAP=3.65971;SAR=111;SRF=86;SRP=3.21711;SRR=82;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:80:52,28:52:1903:28:1038:-69.6353,0,-147.432 0/1:82:27,55:27:1019:55:2033:-158.525,0,-67.3331 0/1:51:20,31:20:745:31:1116:-85.3825,0,-52.0212 0/1:46:30,16:30:1109:16:586:-39.2221,0,-86.2643 0/1:71:26,45:26:938:45:1673:-129.454,0,-63.3464 0/1:52:13,39:13:487:39:1398:-110.434,0,-28.5133 dDocent_Contig_8573 20 . G A 102.913 . AB=0.131868;ABP=110.128;AC=4;AF=0.4;AN=10;AO=12;CIGAR=1X3M1X1M1X;DP=107;DPB=107;DPRA=1.42188;EPP=29.068;EPPR=207.129;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=466;QR=3640;RO=94;RPL=0;RPP=29.068;RPPR=207.129;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=94;SRP=207.129;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:39:34,4:34:1318:4:160:-3.00103,0,-107.126 0|1:21:19,2:19:738:2:71:-0.420273,0,-60.4251 0|1:19:16,3:16:606:3:116:-5.09742,0,-49.1509 0|1:12:9,3:9:349:3:119:-7.48303,0,-28.157 0|0:16:16,0:16:629:0:0:0,-4.81648,-56.9469 .:.:.:.:.:.:.:. dDocent_Contig_8574 12 . A G 586.34 . AB=0.366667;ABP=12.2752;AC=3;AF=0.25;AN=12;AO=22;CIGAR=1X;DP=142;DPB=142;DPRA=0.731707;EPP=50.7827;EPPR=246.505;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.909091;PAIREDR=0.591667;PAO=0;PQA=0;PQR=0;PRO=0;QA=881;QR=4716;RO=120;RPL=0;RPP=50.7827;RPPR=263.587;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=118;SRP=246.505;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:1130:0:0:0,-8.72987,-101.977 0/0:27:27,0:27:1055:0:0:0,-8.12781,-95.2418 0/1:23:21,2:21:828:2:78:-0.479087,0,-67.9073 0/0:26:26,0:26:1031:0:0:0,-7.82678,-93.0811 0/1:14:8,6:8:322:6:245:-18.2151,0,-25.1339 0/1:23:9,14:9:350:14:558:-43.6386,0,-24.9326 dDocent_Contig_8575 12 . T A 503.15 . AB=0.258824;ABP=45.9544;AC=3;AF=0.25;AN=12;AO=27;CIGAR=1X;DP=187;DPB=187;DPRA=0.96875;EPP=61.6401;EPPR=350.446;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.62963;PAIREDR=0.6125;PAO=0;PQA=0;PQR=0;PRO=0;QA=1094;QR=6178;RO=160;RPL=0;RPP=61.6401;RPPR=350.446;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=160;SRP=350.446;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:32,0:32:1241:0:0:0,-9.63296,-111.968 0/0:43:40,3:40:1552:3:123:0,-1.4795,-128.468 0/1:20:10,10:10:384:10:404:-30.6995,0,-28.8908 0/0:27:25,2:25:957:2:82:0,-0.348132,-78.6469 0/1:20:15,5:15:568:5:200:-12.3589,0,-45.4277 0/1:45:38,7:38:1476:7:285:-12.4781,0,-119.558 dDocent_Contig_8576 11 . G C 6752.19 . AB=0.801587;ABP=202.096;AC=7;AF=0.583333;AN=12;AO=210;CIGAR=1X;DP=260;DPB=260;DPRA=0;EPP=459.02;EPPR=111.584;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.966667;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8431;QR=1955;RO=50;RPL=0;RPP=459.02;RPPR=111.584;RPR=210;RUN=1;SAF=210;SAP=459.02;SAR=0;SRF=50;SRP=111.584;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:74:10,64:10:376:64:2576:-209.69,0,-11.9045 0/1:65:6,59:6:246:59:2369:-193.792,0,-2.95317 0/1:60:12,48:12:447:48:1925:-155.387,0,-22.5033 0/1:38:12,26:12:478:26:1048:-83.1715,0,-31.9279 1/1:8:0,8:0:0:8:310:-28.2545,-2.40824,0 0/1:15:10,5:10:408:5:203:-14.1376,0,-32.5651 dDocent_Contig_8577 10 . T A 95.1106 . AB=0.0888889;ABP=69.0713;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=5M1X;DP=306;DPB=303;DPRA=12.04;EPP=29.068;EPPR=600.165;GTI=0;LEN=1;MEANALT=2.2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.963636;PAO=0;PQA=0;PQR=0;PRO=0;QA=479;QR=10556;RO=275;RPL=0;RPP=29.068;RPPR=600.165;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=275;SRP=600.165;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:24:17,5,2:17:659:5,2:193,81:-10.7196,0,-52.6218,-9.15254,-47.446,-62.6941 0|0:112:105,3,3:105:4023:3,3:109,117:0,-22.6885,-352.019,-21.9531,-343.306,-351.303 0|0:86:77,5,4:77:2957:5,4:193,159:0,-7.33499,-248.553,-10.0831,-236.967,-251.613 0|0:58:53,4,1:53:2036:4,1:151,41:0,-3.60437,-169.513,-12.5641,-167.333,-179.407 0|0:5:5,0,0:5:191:0,0:0,0:0,-1.50515,-17.5581,-1.50515,-17.5581,-17.5581 0|1:21:18,1,2:18:690:1,2:39,81:-1.27053,-3.48814,-59.7997,0,-53.4194,-56.0236 dDocent_Contig_8578 30 . C T 437.405 . AB=0.206612;ABP=93.4764;AC=3;AF=0.25;AN=12;AO=35;CIGAR=1X;DP=286;DPB=286;DPRA=0;EPP=79.0118;EPPR=548.05;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.828571;PAIREDR=0.717131;PAO=0;PQA=0;PQR=0;PRO=0;QA=1314;QR=9993;RO=251;RPL=0;RPP=79.0118;RPPR=548.05;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=251;SRP=548.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:25,6:25:981:6:226:-11.366,0,-79.2511 0/0:72:66,6:66:2623:6:228:0,-0.789312,-215.31 0/0:32:31,1:31:1261:1:39:0,-5.7364,-109.858 0/1:42:30,12:30:1170:12:442:-27.4714,0,-92.9293 0/1:48:41,7:41:1640:7:269:-10.1248,0,-133.376 0/0:61:58,3:58:2318:3:110:0,-8.10226,-198.516 dDocent_Contig_8579 7 . C T 255.428 . AB=0.125;ABP=257.073;AC=3;AF=0.25;AN=12;AO=32;CIGAR=1X;DP=352;DPB=352;DPRA=1.01379;EPP=72.4974;EPPR=697.881;GTI=0;LEN=1;MEANALT=1;MQM=59.625;MQMR=59.4531;NS=6;NUMALT=1;ODDS=0;PAIRED=0.625;PAIREDR=0.40625;PAO=0;PQA=0;PQR=0;PRO=0;QA=1222;QR=12275;RO=320;RPL=0;RPP=72.4974;RPPR=697.881;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=320;SRP=697.881;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:45,3:45:1715:3:110:0,-4.18934,-144.343 0/1:79:72,7:72:2791:7:268:-0.702032,0,-227.53 0/1:50:38,12:38:1458:12:464:-27.0596,0,-116.419 0/1:79:72,7:72:2774:7:266:-0.50966,0,-225.946 0/0:58:58,0:58:2211:0:0:0,-17.4597,-197.284 0/0:38:35,3:35:1326:3:114:0,-0.806921,-108.963 dDocent_Contig_8580 55 . C A 515.469 . AB=0.221311;ABP=85.3127;AC=3;AF=0.25;AN=12;AO=29;CIGAR=1X;DP=198;DPB=198;DPRA=1.75;EPP=65.983;EPPR=369.989;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.62069;PAIREDR=0.686391;PAO=0;PQA=0;PQR=0;PRO=0;QA=1103;QR=6392;RO=169;RPL=16;RPP=3.68421;RPPR=4.05106;RPR=13;RUN=1;SAF=16;SAP=3.68421;SAR=13;SRF=89;SRP=4.05106;SRR=80;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:26,9:26:981:9:342:-20.5968,0,-78.0616 0/1:50:42,8:42:1576:8:308:-13.0291,0,-127.055 0/0:17:17,0:17:642:0:0:0,-5.11751,-58.1116 0/1:37:27,10:27:1009:10:377:-23.1428,0,-79.9769 0/0:27:27,0:27:1028:0:0:0,-8.12781,-92.8177 0/0:32:30,2:30:1156:2:76:0,-2.4187,-97.1164 dDocent_Contig_8581 23 . C T 449.926 . AB=0.253165;ABP=44.818;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=254;DPB=254;DPRA=0.902857;EPP=46.4397;EPPR=511.135;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.961538;PAO=0;PQA=0;PQR=0;PRO=0;QA=792;QR=9341;RO=234;RPL=0;RPP=46.4397;RPPR=511.135;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=234;SRP=511.135;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:38,0:38:1528:0:0:0,-11.4391,-137.756 0/0:76:76,0:76:3037:0:0:0,-22.8783,-273.41 0/0:33:33,0:33:1308:0:0:0,-9.93399,-117.979 0/0:28:28,0:28:1135:0:0:0,-8.42884,-102.429 0/1:63:48,15:48:1904:15:588:-34.2869,0,-152.59 0/1:16:11,5:11:429:5:204:-13.9276,0,-34.1446 dDocent_Contig_8582 41 . T A 60.9348 . AB=0.122449;ABP=63.6786;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=427;DPB=427;DPRA=0.895425;EPP=37.7539;EPPR=895.485;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=639;QR=16310;RO=411;RPL=0;RPP=37.7539;RPPR=895.485;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=411;SRP=895.485;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:49:43,6:43:1735:6:241:-7.31533,0,-141.615 0/0:87:82,5:82:3257:5:197:0,-8.0864,-275.095 0/0:75:72,3:72:2832:3:119:0,-11.4819,-243.894 0/0:63:61,2:61:2433:2:82:0,-11.1852,-211.343 0/0:84:84,0:84:3302:0:0:0,-25.2865,-297.254 0/0:69:69,0:69:2751:0:0:0,-20.7711,-247.703 dDocent_Contig_8583 8 . C T 66.0177 . AB=0.11236;ABP=119.172;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=513;DPB=513;DPRA=1.04953;EPP=24.725;EPPR=1095.26;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=384;QR=19300;RO=503;RPL=0;RPP=24.725;RPPR=1095.26;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=503;SRP=1095.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:84:84,0:84:3229:0:0:0,-25.2865,-290.759 0/1:89:79,10:79:3042:10:384:-8.12465,0,-247.148 0/0:69:69,0:69:2632:0:0:0,-20.7711,-237.07 0/0:107:107,0:107:4104:0:0:0,-32.2102,-369.445 0/0:102:102,0:102:3918:0:0:0,-30.7051,-352.716 0/0:62:62,0:62:2375:0:0:0,-18.6639,-213.962 dDocent_Contig_8584 49 . G T 78.5447 . AB=0.127273;ABP=69.3784;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=233;DPB=233;DPRA=1.67816;EPP=29.068;EPPR=465.691;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.511312;PAO=0;PQA=0;PQR=0;PRO=0;QA=464;QR=8742;RO=221;RPL=0;RPP=29.068;RPPR=465.691;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=221;SRP=482.906;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:46:44,2:44:1744:2:79:0,-6.34975,-149.68 0/0:45:42,3:42:1654:3:101:0,-4.12646,-139.68 0/0:25:25,0:25:986:0:0:0,-7.52575,-89.0353 0/1:55:48,7:48:1899:7:284:-9.37734,0,-154.564 0/0:35:35,0:35:1378:0:0:0,-10.536,-124.281 0/0:27:27,0:27:1081:0:0:0,-8.12781,-97.5783 dDocent_Contig_8585 14 . G A 212.541 . AB=0.166667;ABP=72.4974;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=320;DPB=320;DPRA=1.5;EPP=35.5824;EPPR=665.309;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.266667;PAIREDR=0.491803;PAO=0;PQA=0;PQR=0;PRO=0;QA=611;QR=11874;RO=305;RPL=0;RPP=35.5824;RPPR=665.309;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=305;SRP=665.309;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:54,0:54:2114:0:0:0,-16.2556,-190.456 0/1:72:60,12:60:2343:12:490:-22.777,0,-189.365 0/0:45:44,1:44:1706:1:41:0,-9.45178,-149.672 0/0:75:73,2:73:2806:2:80:0,-14.9855,-245.07 0/0:29:29,0:29:1132:0:0:0,-8.72987,-102.167 0/0:45:45,0:45:1773:0:0:0,-13.5463,-159.789 dDocent_Contig_8586 8 . C T 926.151 . AB=0.265823;ABP=78.2697;AC=4;AF=0.333333;AN=12;AO=44;CIGAR=1X;DP=269;DPB=269;DPRA=0.536986;EPP=98.5551;EPPR=491.592;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.522727;PAIREDR=0.537778;PAO=0;PQA=0;PQR=0;PRO=0;QA=1700;QR=8661;RO=225;RPL=0;RPP=98.5551;RPPR=491.592;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=225;SRP=491.592;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:43:30,13:30:1155:13:499:-32.3136,0,-91.3064 0/1:31:15,16:15:583:16:622:-46.9881,0,-43.4813 0/1:38:33,5:33:1267:5:191:-6.11896,0,-102.883 0/1:46:38,8:38:1464:8:310:-14.4162,0,-118.188 0/0:73:73,0:73:2821:0:0:0,-21.9752,-254.064 0/0:38:36,2:36:1371:2:78:0,-4.03567,-116.269 dDocent_Contig_8587 12 . T C 1102.87 . AB=0.167513;ABP=381.331;AC=2;AF=0.166667;AN=12;AO=68;CIGAR=1X;DP=952;DPB=952;DPRA=24.5526;EPP=150.67;EPPR=1922.59;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2652;QR=35006;RO=884;RPL=0;RPP=150.67;RPPR=1922.59;RPR=68;RUN=1;SAF=68;SAP=150.67;SAR=0;SRF=884;SRP=1922.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:293:292,1:292:11571:1:39:0,-84.3052,-1036.71 0/0:246:245,1:245:9753:1:40:0,-70.0577,-873.166 0/1:246:208,38:208:8217:38:1479:-59.307,0,-665.052 0/1:148:120,28:120:4714:28:1094:-54.2013,0,-379.637 0/0:16:16,0:16:629:0:0:0,-4.81648,-56.9441 0/0:3:3,0:3:122:0:0:0,-0.90309,-11.3725 dDocent_Contig_8588 8 . C T 120.372 . AB=0.151515;ABP=72.629;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=202;DPB=202;DPRA=0.970588;EPP=24.725;EPPR=419.933;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.947917;PAO=0;PQA=0;PQR=0;PRO=0;QA=382;QR=7358;RO=192;RPL=0;RPP=24.725;RPPR=419.933;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=192;SRP=419.933;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1340:0:0:0,-10.536,-120.886 0/1:40:33,7:33:1268:7:267:-12.3518,0,-102.368 0/0:14:14,0:14:525:0:0:0,-4.21442,-47.5894 0/1:26:23,3:23:869:3:115:-2.89811,0,-70.6989 0/0:54:54,0:54:2077:0:0:0,-16.2556,-187.159 0/0:33:33,0:33:1279:0:0:0,-9.93399,-115.399 dDocent_Contig_8589 24 . C G 826.487 . AB=0.142857;ABP=49.5419;AC=0;AF=0;AN=12;AO=6;CIGAR=1X3M1X;DP=215;DPB=232.4;DPRA=2.33333;EPP=4.45795;EPPR=309.188;GTI=0;LEN=1;MEANALT=3;MQM=52;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0;PAIREDR=0.992908;PAO=0;PQA=0;PQR=0;PRO=0;QA=228;QR=5488;RO=141;RPL=0;RPP=16.0391;RPPR=309.188;RPR=6;RUN=1;SAF=4;SAP=4.45795;SAR=2;SRF=141;SRP=309.188;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:16:2,5,1,0,8:2:81:5,1,0,8:178,40,0,289:-29.7236,-15.8463,-21.0308,-27.5179,-19.7291,-33.9033,-30.3256,-22.536,-34.2044,-37.0116,-7.76585,0,-11.6527,-14.4578,-12.0495 0|0:16:10,2,0,0,4:10:390:2,0,0,4:74,0,0,153:-9.26854,-6.25594,-37.7219,-12.2788,-38.324,-44.3468,-12.2788,-38.324,-44.3468,-44.3468,0,-26.0536,-32.075,-32.075,-30.8709 0|0:9:9,0,0,0,0:9:352:0,0,0,0:0,0,0,0:0,-2.70927,-32.04,-2.70927,-32.04,-32.04,-2.70927,-32.04,-32.04,-32.04,-2.70927,-32.04,-32.04,-32.04,-32.04 0|0:26:14,0,5,2,5:14:542:0,5,2,5:0,188,79,190:-11.1314,-15.3458,-59.8677,-0.316529,-44.8369,-43.3317,-8.91792,-53.4423,-38.4115,-52.8402,0,-44.5236,-29.4942,-38.0981,-43.0185 0|0:97:76,13,0,0,8:76:2951:13,0,0,8:505,0,0,287:-18.701,0,-238.666,-41.5793,-242.58,-284.078,-41.5793,-242.58,-284.078,-284.078,-25.7357,-226.698,-268.194,-268.194,-265.786 0|0:51:30,9,0,0,12:30:1172:9,0,0,12:342,0,0,442:-23.0124,-3.97805,-97.6628,-32.0433,-100.372,-128.417,-32.0433,-100.372,-128.417,-128.417,0,-68.3177,-96.3594,-96.3594,-92.747 dDocent_Contig_8590 55 . C T 6976.39 . AB=0.609907;ABP=36.9001;AC=7;AF=0.583333;AN=12;AO=248;CIGAR=1X;DP=376;DPB=376;DPRA=0;EPP=541.535;EPPR=280.959;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.822581;PAIREDR=0.726562;PAO=0;PQA=0;PQR=0;PRO=0;QA=8988;QR=4709;RO=128;RPL=130;RPP=4.27115;RPPR=4.70676;RPR=118;RUN=1;SAF=130;SAP=4.27115;SAR=118;SRF=69;SRP=4.70676;SRR=59;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:44:20,24:20:724:24:888:-66.9877,0,-52.2305 0/1:51:34,17:34:1235:17:633:-41.9481,0,-96.076 0/1:31:20,11:20:749:11:391:-26.1937,0,-58.3976 0/1:109:35,74:35:1322:74:2672:-207.87,0,-86.4398 0/1:88:17,71:17:611:71:2591:-206.898,0,-28.822 1/1:53:2,51:2:68:51:1813:-156.963,-9.49666,0 dDocent_Contig_8591 1 . N G 373.646 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=10;CIGAR=1X;DP=10;DPB=10;DPRA=0;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=397;QR=0;RO=0;RPL=0;RPP=24.725;RPPR=0;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:7:0,7:0:0:7:278:-25.3884,-2.10721,0 1/1:2:0,2:0:0:2:78:-7.40347,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 dDocent_Contig_8592 98 . N A 167.782 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=170;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_8593 19 . A G 484.303 . AB=0.160377;ABP=215.405;AC=6;AF=0.5;AN=12;AO=34;CIGAR=2X;DP=212;DPB=212;DPRA=0;EPP=76.8404;EPPR=387.361;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.757062;PAO=0;PQA=0;PQR=0;PRO=0;QA=1334;QR=7000;RO=177;RPL=0;RPP=76.8404;RPPR=387.361;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=177;SRP=387.361;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:34:28,6:28:1108:6:242:-11.9223,0,-89.772 0|1:21:17,4:17:676:4:158:-8.27834,0,-54.8499 0|1:32:23,9:23:918:9:332:-20.5884,0,-73.2948 0|1:35:31,3:31:1236:3:122:-0.72884,0,-100.872 0|1:52:45,7:45:1766:7:278:-9.7366,0,-143.511 0|1:38:33,5:33:1296:5:202:-7.12273,0,-105.47 dDocent_Contig_8594 1 . N G 77.8076 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_8595 68 . G C 5705.74 . AB=0.576316;ABP=22.2335;AC=5;AF=0.5;AN=10;AO=219;CIGAR=1X;DP=380;DPB=380;DPRA=0;EPP=478.563;EPPR=352.617;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7680;QR=5581;RO=161;RPL=219;RPP=478.563;RPPR=352.617;RPR=0;RUN=1;SAF=219;SAP=478.563;SAR=0;SRF=161;SRP=352.617;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:119:47,72:47:1555:72:2493:-188.799,0,-104.406 0/1:61:26,35:26:887:35:1218:-91.5599,0,-61.7753 0/1:85:33,52:33:1168:52:1861:-142.172,0,-79.835 0/1:104:45,59:45:1617:59:2071:-155.342,0,-114.506 ./.:.:.:.:.:.:.:. 0/1:11:10,1:10:354:1:37:-0.386499,0,-28.8878 dDocent_Contig_8596 43 . C T 1827.13 . AB=0.558824;ABP=4.03217;AC=3;AF=0.25;AN=12;AO=54;CIGAR=1X;DP=118;DPB=118;DPRA=2.81633;EPP=120.27;EPPR=141.985;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2151;QR=2560;RO=64;RPL=0;RPP=120.27;RPPR=141.985;RPR=54;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=64;SRP=141.985;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:720:0:0:0,-5.41854,-65.1254 0/1:34:15,19:15:588:19:759:-58.3966,0,-43.0229 0/0:13:13,0:13:525:0:0:0,-3.91339,-47.5974 0/0:12:12,0:12:485:0:0:0,-3.61236,-44.0004 0/0:6:6,0:6:242:0:0:0,-1.80618,-22.1575 1/1:35:0,35:0:0:35:1392:-125.539,-10.5361,0 dDocent_Contig_8597 47 . C T 215.245 . AB=0.28125;ABP=16.3106;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=117;DPB=117;DPRA=1.88235;EPP=22.5536;EPPR=218.311;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.981308;PAO=0;PQA=0;PQR=0;PRO=0;QA=357;QR=4209;RO=107;RPL=0;RPP=22.5536;RPPR=218.311;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=107;SRP=235.358;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:467:0:0:0,-3.61236,-42.3778 0/0:16:16,0:16:622:0:0:0,-4.81648,-56.3114 0/1:32:22,9:22:873:9:357:-23.0474,0,-69.4532 0/0:6:6,0:6:241:0:0:0,-1.80618,-22.0667 0/0:27:27,0:27:1044:0:0:0,-8.12781,-94.2513 0/0:24:24,0:24:962:0:0:0,-7.22472,-86.8829 dDocent_Contig_8598 11 . G A 1627.58 . AB=0.232919;ABP=202.516;AC=6;AF=0.5;AN=12;AO=75;CIGAR=1X;DP=322;DPB=322;DPRA=0;EPP=165.871;EPPR=539.364;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.973333;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2987;QR=9787;RO=247;RPL=0;RPP=165.871;RPPR=539.364;RPR=75;RUN=1;SAF=75;SAP=165.871;SAR=0;SRF=247;SRP=539.364;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:56:37,19:37:1487:19:739:-49.9662,0,-117.217 0/1:83:64,19:64:2566:19:759:-43.6433,0,-206.082 0/1:31:27,4:27:1081:4:161:-5.54334,0,-88.2452 0/1:67:59,8:59:2336:8:325:-9.45042,0,-190.227 0/1:62:40,22:40:1531:22:882:-61.0204,0,-119.356 0/1:23:20,3:20:786:3:121:-4.3563,0,-64.1285 dDocent_Contig_8599 9 . A T 888.497 . AB=0.221698;ABP=145.631;AC=6;AF=0.5;AN=12;AO=47;CIGAR=1X;DP=212;DPB=212;DPRA=0;EPP=105.07;EPPR=361.303;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.553191;PAIREDR=0.49697;PAO=0;PQA=0;PQR=0;PRO=0;QA=1797;QR=6275;RO=165;RPL=0;RPP=105.07;RPPR=361.303;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=165;SRP=361.303;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:31,6:31:1193:6:218:-8.83051,0,-96.5269 0/1:43:26,17:26:990:17:651:-45.9787,0,-76.4673 0/1:22:17,5:17:657:5:195:-11.3015,0,-52.8445 0/1:39:32,7:32:1217:7:271:-13.0161,0,-98.0854 0/1:48:40,8:40:1526:8:306:-13.4512,0,-123.165 0/1:23:19,4:19:692:4:156:-7.4936,0,-55.6717 dDocent_Contig_8600 83 . C T 5961.83 . AB=0.283939;ABP=427.141;AC=4;AF=0.333333;AN=12;AO=297;CIGAR=1X;DP=1635;DPB=1635;DPRA=0.887946;EPP=647.938;EPPR=2906.27;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10192;QR=45877;RO=1337;RPL=297;RPP=647.938;RPPR=2906.27;RPR=0;RUN=1;SAF=297;SAP=647.938;SAR=0;SRF=1337;SRP=2906.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:296:219,77:219:7551:77:2607:-145.782,0,-590.577 0/1:341:242,99:242:8268:99:3394:-203.041,0,-641.545 0/1:154:106,48:106:3631:48:1666:-103.872,0,-280.654 0/1:255:181,73:181:6155:73:2525:-150.711,0,-477.287 0/0:326:326,0:326:11218:0:0:0,-98.1358,-1009.6 0/0:263:263,0:263:9054:0:0:0,-79.1709,-814.907 dDocent_Contig_8601 74 . A T 977.432 . AB=0.6;ABP=4.74748;AC=3;AF=0.25;AN=12;AO=35;CIGAR=1X;DP=249;DPB=249;DPRA=0.441176;EPP=79.0118;EPPR=467.705;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1231;QR=7148;RO=214;RPL=35;RPP=79.0118;RPPR=467.705;RPR=0;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=214;SRP=467.705;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:8,12:8:252:12:419:-32.0213,0,-16.9676 1/1:25:2,23:2:68:23:812:-66.9437,-1.06787,0 0/0:13:13,0:13:465:0:0:0,-3.91339,-42.1855 0/0:10:10,0:10:317:0:0:0,-3.0103,-28.8387 0/0:89:89,0:89:2961:0:0:0,-26.7917,-266.737 0/0:92:92,0:92:3085:0:0:0,-27.6948,-277.895 dDocent_Contig_8602 18 . T A 1701.34 . AB=0.421769;ABP=10.8246;AC=5;AF=0.416667;AN=12;AO=62;CIGAR=1X;DP=172;DPB=172;DPRA=1.176;EPP=137.642;EPPR=241.872;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.983871;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2465;QR=4368;RO=110;RPL=0;RPP=137.642;RPPR=241.872;RPR=62;RUN=1;SAF=62;SAP=137.642;SAR=0;SRF=110;SRP=241.872;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:976:0:0:0,-7.52575,-88.1321 0/1:58:31,27:31:1227:27:1082:-80.2091,0,-93.2389 0/1:18:15,3:15:612:3:122:-5.95395,0,-49.9986 0/1:37:21,16:21:829:16:635:-46.3436,0,-63.7784 0/1:19:16,3:16:650:3:118:-5.28201,0,-53.1139 0/1:15:2,13:2:74:13:508:-41.5454,0,-2.50857 dDocent_Contig_8604 63 . T G 1875.72 . AB=0.590361;ABP=8.89682;AC=4;AF=0.333333;AN=12;AO=61;CIGAR=1X;DP=138;DPB=138;DPRA=2.78571;EPP=135.47;EPPR=170.214;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.967213;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2427;QR=3053;RO=77;RPL=61;RPP=135.47;RPPR=170.214;RPR=0;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=77;SRP=170.214;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:39:20,19:20:787:19:752:-56.2615,0,-59.409 0/0:23:22,1:22:886:1:40:0,-2.92801,-76.0526 0/0:14:14,0:14:552:0:0:0,-4.21442,-50.0152 0/1:44:14,30:14:562:30:1194:-94.49,0,-37.6761 0/0:7:7,0:7:266:0:0:0,-2.10721,-24.2978 1/1:11:0,11:0:0:11:441:-40.0428,-3.31133,0 dDocent_Contig_8605 96 . C T 1822.99 . AB=0.274924;ABP=148.656;AC=6;AF=0.5;AN=12;AO=91;CIGAR=1X;DP=331;DPB=331;DPRA=0;EPP=3.03416;EPPR=11.1533;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9167;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.681319;PAIREDR=0.666667;PAO=0;PQA=0;PQR=0;PRO=0;QA=3236;QR=8914;RO=240;RPL=91;RPP=200.614;RPPR=524.164;RPR=0;RUN=1;SAF=46;SAP=3.03416;SAR=45;SRF=105;SRP=11.1533;SRR=135;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:48:34,14:34:1241:14:468:-27.9788,0,-97.5171 0/1:84:57,27:57:2107:27:978:-63.0377,0,-164.559 0/1:49:32,17:32:1192:17:643:-43.4511,0,-92.8072 0/1:42:29,13:29:1099:13:459:-28.9971,0,-86.5576 0/1:42:36,6:36:1337:6:203:-5.95562,0,-107.881 0/1:66:52,14:52:1938:14:485:-24.1006,0,-154.77 dDocent_Contig_8606 13 . A T 84.923 . AB=0.5;ABP=3.0103;AC=3;AF=0.75;AN=4;AO=3;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=9.52472;EPPR=7.35324;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=52;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=118;QR=74;RO=2;RPL=0;RPP=9.52472;RPPR=7.35324;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=2;SRP=7.35324;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:39:-3.89656,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 0/1:4:2,2:2:74:2:79:-6.29351,0,-5.79954 dDocent_Contig_8607 8 . C A 3113.59 . AB=0.0625;ABP=428.619;AC=5;AF=0.416667;AN=12;AO=16;CIGAR=1X2M2X1M1X3M1X1M2X1M2X1M1X;DP=476;DPB=475.947;DPRA=1.9845;EPP=37.7539;EPPR=556.736;GTI=0;LEN=1;MEANALT=4.33333;MQM=32.6875;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0;PAIREDR=0.490196;PAO=0;PQA=0;PQR=0;PRO=0;QA=589;QR=9985;RO=255;RPL=0;RPP=37.7539;RPPR=556.736;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=255;SRP=556.736;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:51:31,0,17,3,0:31:1219:0,17,3,0:0,650,116,0:-26.2096,-35.5416,-135.884,0,-100.331,-95.2138,-27.6012,-127.954,-92.4058,-127.051,-35.5416,-135.884,-100.331,-127.954,-135.884 0|1:131:71,0,44,9,0:71:2766:0,44,9,0:0,1689,333,0:-69.8137,-91.1868,-318.589,0,-227.412,-214.167,-68.5987,-296.009,-204.838,-293.3,-91.1868,-318.589,-227.412,-296.009,-318.589 0|0:43:34,4,1,0,3:34:1337:4,1,0,3:156,38,0,76:0,-1.8137,-110.698,-8.13581,-109.806,-117.915,-10.235,-111.902,-118.216,-120.313,-5.12871,-106.787,-113.099,-115.196,-114.292 0|1:74:43,0,23,4,1:43:1668:0,23,4,1:0,883,140,29:-35.9284,-48.8727,-185.981,0,-137.142,-130.219,-39.5865,-176.7,-127.866,-175.496,-46.8347,-183.943,-135.106,-174.663,-183.642 0|1:97:33,0,64,0,0:33:1297:0,64,0,0:0,2432,0,0:-123.715,-133.649,-240.376,0,-107.076,-87.8102,-133.649,-240.376,-107.076,-240.376,-133.649,-240.376,-107.076,-240.376,-240.376 0|1:80:43,0,37,0,0:43:1698:0,37,0,0:0,1409,0,0:-64.9146,-77.8589,-217.651,0,-140.118,-128.98,-77.8589,-217.651,-140.118,-217.651,-77.8589,-217.651,-140.118,-217.651,-217.651 dDocent_Contig_8608 70 . A G 122.403 . AB=0.216216;ABP=28.8919;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=158;DPB=158;DPRA=2.05128;EPP=22.5536;EPPR=326.56;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.879195;PAO=0;PQA=0;PQR=0;PRO=0;QA=307;QR=5141;RO=149;RPL=9;RPP=22.5536;RPPR=326.56;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=149;SRP=326.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1217:0:0:0,-10.536,-109.833 0/0:23:23,0:23:801:0:0:0,-6.92369,-72.4095 0/1:37:29,8:29:974:8:273:-13.763,0,-76.8212 0/0:43:42,1:42:1444:1:34:0,-9.54538,-126.854 0/0:18:18,0:18:633:0:0:0,-5.41854,-57.2975 0/0:2:2,0:2:72:0:0:0,-0.60206,-6.83672 dDocent_Contig_8609 29 . A C 310.534 . AB=0.181818;ABP=109.412;AC=3;AF=0.25;AN=12;AO=24;CIGAR=3M1X4M;DP=300;DPB=298.5;DPRA=1;EPP=55.1256;EPPR=580.622;GTI=0;LEN=1;MEANALT=2.75;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.916667;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=861;QR=9534;RO=266;RPL=0;RPP=55.1256;RPPR=580.622;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=266;SRP=580.622;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:39:38,0,0:38:1332:0,0:0,0:0,-11.4391,-120.082,-11.4391,-120.082,-120.082 0|0:79:75,0,2:75:2698:0,2:0,76:0,-22.5772,-242.795,-16.207,-236.561,-235.959 0|1:27:22,0,3:22:796:0,3:0,110:-2.53722,-9.15988,-74.2261,0,-65.232,-64.3289 0|1:57:44,0,11:44:1562:0,11:0,389:-18.5165,-31.7618,-159.034,0,-127.351,-124.039 0|0:61:60,0,0:60:2163:0,0:0,0:0,-18.0618,-194.839,-18.0618,-194.839,-194.839 0|1:37:27,2,8:27:983:2,8:69,286:-15.201,-17.7256,-97.4172,0,-74.7018,-77.898 dDocent_Contig_8610 135 . G T 810.749 . AB=0.466667;ABP=3.73412;AC=4;AF=0.333333;AN=12;AO=35;CIGAR=1X;DP=91;DPB=91;DPRA=2.34375;EPP=79.0118;EPPR=124.613;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.914286;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1217;QR=1986;RO=56;RPL=0;RPP=79.0118;RPPR=124.613;RPR=35;RUN=1;SAF=0;SAP=79.0118;SAR=35;SRF=0;SRP=124.613;SRR=56;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:17:9,8:9:318:8:282:-20.6041,0,-23.8434 0/1:18:5,13:5:180:13:458:-36.1359,0,-11.1335 0/1:12:9,3:9:310:3:104:-6.09066,0,-24.6205 0/1:28:17,11:17:602:11:373:-25.4661,0,-46.0814 0/0:7:7,0:7:253:0:0:0,-2.10721,-23.12 0/0:9:9,0:9:323:0:0:0,-2.70927,-29.4151 dDocent_Contig_8611 20 . A C 339.866 . AB=0.133333;ABP=20.5268;AC=0;AF=0;AN=12;AO=2;CIGAR=3X;DP=201;DPB=201;DPRA=0.428571;EPP=7.35324;EPPR=378.675;GTI=0;LEN=1;MEANALT=2;MQM=56;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0.884393;PAO=0;PQA=0;PQR=0;PRO=0;QA=76;QR=6820;RO=173;RPL=0;RPP=7.35324;RPPR=378.675;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=173;SRP=378.675;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:15:11,2,2,0:11:425:2,2,0:76,80,0:-3.28897,-0.385101,-34.6755,0,-28.6853,-34.3075,-6.6003,-35.2775,-34.9096,-41.5017 0|0:25:21,0,4,0:21:825:0,4,0:0,162,0:-7.441,-13.7626,-81.6073,0,-68.2473,-67.0432,-13.7626,-81.6073,-68.2473,-81.6073 0|0:18:18,0,0,0:18:720:0,0,0:0,0,0:0,-5.41854,-65.1267,-5.41854,-65.1267,-65.1267,-5.41854,-65.1267,-65.1267,-65.1267 0|0:34:24,0,10,0:24:933:0,10,0:0,387,0:-24.9477,-32.1724,-108.832,0,-77.0464,-74.0361,-32.1724,-108.832,-77.0464,-108.832 0|0:52:51,0,0,0:51:2014:0,0,0:0,0,0:0,-15.3525,-181.056,-15.3525,-181.056,-181.056,-15.3525,-181.056,-181.056,-181.056 0|0:57:48,0,3,6:48:1903:0,3,6:0,121,242:-5.49847,-19.9479,-176.58,-9.97366,-166.606,-165.702,0,-156.632,-146.657,-154.825 dDocent_Contig_8612 28 . C A 616.079 . AB=0.184211;ABP=68.8402;AC=5;AF=0.416666;AN=12;AO=29;CIGAR=1X5M;DP=192;DPB=192;DPRA=0;EPP=65.983;EPPR=335.246;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.517241;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1150;QR=6004;RO=153;RPL=0;RPP=65.983;RPPR=335.246;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=153;SRP=335.246;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:23:15,0,2,6:15:584:0,2,6:0,79,238:-15.0743,-19.5898,-67.5807,-13.0896,-61.0798,-60.4778,0,-47.9904,-41.4892,-46.1843 0|1:21:16,0,0,5:16:619:0,0,5:0,0,204:-12.4224,-17.2389,-68.0641,-17.2389,-68.0641,-68.0641,0,-51.2277,-51.2277,-49.7225 0|0:38:35,0,0,3:35:1387:0,0,3:0,0,104:0,-10.536,-124.744,-10.536,-124.744,-124.744,-1.73973,-116.298,-116.298,-115.395 0|1:32:21,5,2,3:21:837:5,2,3:199,82,120:-10.075,0,-67.4415,-9.62307,-62.1772,-77.9623,-6.50654,-59.0611,-68.6789,-74.5452 0|0:70:66,0,0,4:66:2577:0,0,4:0,0,163:0,-19.868,-231.68,-19.868,-231.68,-231.68,-6.01367,-218.231,-218.231,-217.027 1|1:8:0,0,0,8:0:0:0,0,8:0,0,321:-29.2579,-29.2579,-29.2579,-29.2579,-29.2579,-29.2579,-2.40824,-2.40824,-2.40824,0 dDocent_Contig_8613 13 . G T 705.268 . AB=0.195531;ABP=147.14;AC=2;AF=0.166667;AN=12;AO=50;CIGAR=1X;DP=410;DPB=410;DPRA=0;EPP=111.584;EPPR=784.74;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2015;QR=14332;RO=360;RPL=0;RPP=111.584;RPPR=784.74;RPR=50;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=360;SRP=784.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:37,2:37:1476:2:79:0,-4.24293,-125.586 0/1:39:28,11:28:1113:11:435:-27.7558,0,-88.7123 0/0:79:73,6:73:2898:6:238:0,-1.9878,-239.124 0/0:26:24,2:24:956:2:82:0,-0.0471021,-78.5517 0/1:140:116,24:116:4651:24:976:-45.9922,0,-376.35 0/0:87:82,5:82:3238:5:205:0,-7.3546,-272.647 dDocent_Contig_8614 1 . N G 423.47 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=14;CIGAR=1X;DP=14;DPB=14;DPRA=0;EPP=33.4109;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=39.2143;MQMR=0;NS=4;NUMALT=1;ODDS=3.38813e-21;PAIRED=0.357143;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=565;QR=0;RO=0;RPL=0;RPP=33.4109;RPPR=0;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:40:-2.86684,-0.30103,0 1/1:8:0,8:0:0:8:327:-23.5339,-2.40824,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 1/1:3:0,3:0:0:3:117:-7.65737,-0.90309,0 ./.:.:.:.:.:.:.:. dDocent_Contig_8615 60 . G A 118.359 . AB=0.24;ABP=17.6895;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=282;DPB=282;DPRA=0.918367;EPP=29.068;EPPR=584.965;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.981343;PAO=0;PQA=0;PQR=0;PRO=0;QA=448;QR=9712;RO=268;RPL=12;RPP=29.068;RPPR=584.965;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=268;SRP=584.965;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:45:44,1:44:1561:1:37:0,-9.84852,-137.077 0/0:55:55,0:55:1966:0:0:0,-16.5566,-177.208 0/1:25:19,6:19:715:6:228:-13.3587,0,-57.1518 0/0:65:58,5:58:2159:5:183:0,-2.50864,-177.715 0/0:64:64,0:64:2304:0:0:0,-19.2659,-207.573 0/0:28:28,0:28:1007:0:0:0,-8.42884,-90.9296 dDocent_Contig_8617 14 . T C 55.4811 . AB=0.106383;ABP=129.51;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=248;DPB=248;DPRA=1.22078;EPP=24.725;EPPR=519.821;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.7;PAIREDR=0.567227;PAO=0;PQA=0;PQR=0;PRO=0;QA=403;QR=9434;RO=238;RPL=0;RPP=24.725;RPPR=519.821;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=238;SRP=519.821;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:40:35,5:35:1391:5:201:-6.42969,0,-113.404 0/1:54:49,5:49:1950:5:202:-2.30588,0,-159.436 0/0:23:23,0:23:925:0:0:0,-6.92369,-83.5516 0/0:34:34,0:34:1372:0:0:0,-10.235,-123.736 0/0:48:48,0:48:1853:0:0:0,-14.4494,-166.978 0/0:49:49,0:49:1943:0:0:0,-14.7505,-175.066 dDocent_Contig_8618 36 . G A 102.975 . AB=0.208333;ABP=20.744;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=394;DPB=394;DPRA=0.324324;EPP=13.8677;EPPR=847.713;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=204;QR=15539;RO=389;RPL=0;RPP=13.8677;RPPR=847.713;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=389;SRP=847.713;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:19,5:19:766:5:204:-11.5193,0,-62.0373 0/0:25:25,0:25:986:0:0:0,-7.52575,-89.0348 0/0:26:26,0:26:1043:0:0:0,-7.82678,-94.1584 0/0:29:29,0:29:1163:0:0:0,-8.72987,-104.947 0/0:165:165,0:165:6568:0:0:0,-49.6699,-590.844 0/0:125:125,0:125:5013:0:0:0,-37.6287,-451.048 dDocent_Contig_8619 7 . C A 1224.28 . AB=0.0526316;ABP=102.098;AC=0;AF=0;AN=12;AO=3;CIGAR=1X3M1X3M1X2M2X2M1X;DP=266;DPB=265.688;DPRA=1.41322;EPP=9.52472;EPPR=437.305;GTI=0;LEN=1;MEANALT=2;MQM=50;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=114;QR=7784;RO=200;RPL=0;RPP=9.52472;RPPR=437.305;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=200;SRP=437.305;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:29:28,0,0,0,1:28:1088:0,0,0,1:0,0,0,36:0,-8.42884,-97.8579,-8.42884,-97.8579,-97.8579,-8.42884,-97.8579,-97.8579,-97.8579,-5.13159,-94.9214,-94.9214,-94.9214,-94.6204 0|0:57:41,3,0,13,0:41:1576:3,0,13,0:114,0,506,0:-29.2471,-32.3075,-160.774,-41.5893,-161.677,-170.961,0,-120.096,-129.38,-125.466,-41.5893,-161.677,-170.961,-129.38,-170.961 0|0:67:66,0,0,0,0:66:2588:0,0,0,0:0,0,0,0:0,-19.868,-232.924,-19.868,-232.924,-232.924,-19.868,-232.924,-232.924,-232.924,-19.868,-232.924,-232.924,-232.924,-232.924 0|0:25:22,0,0,1,0:22:859:0,0,1,0:0,0,40,0:0,-6.62266,-77.2369,-6.62266,-77.2369,-77.2369,-3.32426,-73.9414,-73.9414,-73.6404,-6.62266,-77.2369,-77.2369,-73.9414,-77.2369 0|0:35:19,0,0,0,15:19:732:0,0,0,15:0,0,0,601:-43.8285,-49.5481,-109.642,-49.5481,-109.642,-109.642,-49.5481,-109.642,-109.642,-109.642,0,-60.1251,-60.1251,-60.1251,-55.6097 0|0:53:24,0,10,0,19:24:941:0,10,0,19:0,392,0,751:-54.5747,-61.7994,-139.183,-29.5679,-106.95,-103.94,-61.7994,-139.183,-106.95,-139.183,0,-77.3841,-45.1515,-77.3841,-71.6645 dDocent_Contig_8620 30 . C A 35.4566 . AB=0.176471;ABP=18.4661;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=2X;DP=171;DPB=171;DPRA=1.32039;EPP=16.0391;EPPR=361.303;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.769697;PAO=0;PQA=0;PQR=0;PRO=0;QA=213;QR=6484;RO=165;RPL=0;RPP=16.0391;RPPR=361.303;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=165;SRP=361.303;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:17:14,3:14:539:3:106:-4.76739,0,-43.7289 0|0:51:48,3:48:1889:3:107:0,-5.37132,-160.243 0|0:27:27,0:27:1072:0:0:0,-8.12781,-96.7723 0|0:25:25,0:25:994:0:0:0,-7.52575,-89.7609 0|0:33:33,0:33:1284:0:0:0,-9.93399,-115.837 0|0:18:18,0:18:706:0:0:0,-5.41854,-63.8685 dDocent_Contig_8621 32 . G C 84.5411 . AB=0.185185;ABP=26.2531;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=2X;DP=95;DPB=95;DPRA=1.98529;EPP=13.8677;EPPR=198.443;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=197;QR=3587;RO=90;RPL=0;RPP=13.8677;RPPR=198.443;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=90;SRP=198.443;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:20:20,0:20:793:0:0:0,-6.0206,-71.6859 0|0:13:13,0:13:525:0:0:0,-3.91339,-47.5965 0|0:16:16,0:16:648:0:0:0,-4.81648,-58.6541 0|0:9:9,0:9:358:0:0:0,-2.70927,-32.582 0|1:27:22,5:22:861:5:197:-9.97698,0,-69.6681 0|0:10:10,0:10:402:0:0:0,-3.0103,-36.5402 dDocent_Contig_8622 51 . C T 317.982 . AB=0.0933333;ABP=110.744;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=2M1X3M;DP=240;DPB=258;DPRA=0;EPP=20.3821;EPPR=443.819;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.75;PAIREDR=0.561576;PAO=0;PQA=0;PQR=0;PRO=0;QA=320;QR=7942;RO=203;RPL=8;RPP=20.3821;RPPR=443.819;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=203;SRP=443.819;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:39:34,5,0:34:1355:5,0:161,0:-3.06497,0,-110.479,-13.3,-111.984,-124.952 0|0:68:56,12,0:56:2194:12,0:419,0:-17.5581,0,-177.188,-34.4158,-180.8,-214.86 0|0:16:9,6,0:9:356:6,0:230,0:-16.152,0,-27.4884,-18.8613,-29.2946,-48.1654 0|1:34:28,3,3:28:1080:3,3:114,122:-1.64763,-0.740516,-88.4964,0,-79.3343,-87.7798 0|0:42:40,0,1:40:1555:0,1:0,40:0,-12.0412,-139.953,-8.58633,-136.657,-136.356 0|1:41:36,0,4:36:1402:0,4:0,158:-2.15959,-12.9967,-128.216,0,-115.214,-114.01 dDocent_Contig_8623 68 . A T 159.823 . AB=0.25;ABP=18.2106;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=182;DPB=182;DPRA=1.33945;EPP=20.3821;EPPR=380.846;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.637931;PAO=0;PQA=0;PQR=0;PRO=0;QA=323;QR=6678;RO=174;RPL=8;RPP=20.3821;RPPR=380.846;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=174;SRP=380.846;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:45:44,1:44:1624:1:39:0,-9.64978,-142.5 0/0:75:75,0:75:2897:0:0:0,-22.5772,-260.864 0/1:28:21,7:21:820:7:284:-17.5052,0,-65.6881 0/0:19:19,0:19:747:0:0:0,-5.71957,-67.5515 0/0:4:4,0:4:159:0:0:0,-1.20412,-14.692 0/0:11:11,0:11:431:0:0:0,-3.31133,-39.1436 dDocent_Contig_8624 54 . C T 33.666 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=3;CIGAR=3M1X3M;DP=90;DPB=87;DPRA=2.48077;EPP=9.52472;EPPR=176.728;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.85;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=3169;RO=80;RPL=3;RPP=9.52472;RPPR=176.728;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=80;SRP=176.728;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:21:18,3,0:18:716:3,0:117,0:-4.58766,0,-58.4447,-10.0062,-59.3478,-68.9632 0|0:28:26,0,2:26:1028:0,2:0,82:0,-7.82678,-92.4121,-0.649162,-85.6429,-85.0408 0|0:15:13,1,1:13:504:1,1:40,41:0,-0.623253,-41.7031,-0.524365,-38.6185,-41.6134 0|0:5:5,0,0:5:201:0,0:0,0:0,-1.50515,-18.4709,-1.50515,-18.4709,-18.4709 0|0:14:11,0,0:11:438:0,0:0,0:0,-3.31133,-39.3866,-3.31133,-39.3866,-39.3866 0|0:7:7,0,0:7:282:0,0:0,0:0,-2.10721,-25.7532,-2.10721,-25.7532,-25.7532 dDocent_Contig_8626 107 . N T 161.169 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=0;NS=4;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=166;QR=0;RO=0;RPL=0;RPP=22.5536;RPPR=0;RPR=9;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:40:-3.72481,-0.60206,0 1/1:2:0,2:0:0:2:34:-3.2097,-0.60206,0 1/1:3:0,3:0:0:3:61:-5.64456,-0.90309,0 1/1:2:0,2:0:0:2:31:-2.93464,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_8627 9 . T C 1451.39 . AB=0.14;ABP=115.579;AC=6;AF=0.5;AN=12;AO=14;CIGAR=2X2M2X3M1X;DP=174;DPB=174;DPRA=0;EPP=33.4109;EPPR=231.015;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.785714;PAIREDR=0.638095;PAO=0;PQA=0;PQR=0;PRO=0;QA=546;QR=4098;RO=105;RPL=0;RPP=33.4109;RPPR=231.015;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=105;SRP=231.015;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:46:27,0,17,2:27:1064:0,17,2:0,669,75:-46.9207,-55.0485,-142.587,0,-87.5547,-82.4372,-48.9069,-136.444,-81.4125,-135.842 0|1:30:20,2,8,0:20:791:2,8,0:80,316,0:-19.9788,-19.4083,-83.9046,0,-58.5034,-62.6857,-25.9994,-84.5066,-65.094,-91.0971 0|1:16:8,0,8,0:8:318:0,8,0:0,302,0:-22.7208,-25.129,-51.3212,0,-26.5793,-24.1711,-25.129,-51.3212,-26.5793,-51.3212 0|1:28:10,2,14,0:10:396:2,14,0:79,526,0:-40.0588,-36.5663,-68.5648,0,-26.0935,-28.38,-43.0691,-69.1668,-32.5944,-75.6685 0|1:30:21,0,1,8:21:810:0,1,8:0,40,315:-19.5862,-25.9078,-92.4161,-22.612,-89.1207,-88.8196,0,-66.5009,-63.2052,-64.0926 0|1:24:19,1,0,4:19:719:1,0,4:40,0,156:-7.09585,-9.51835,-68.1471,-12.8154,-68.4481,-71.744,0,-55.6228,-58.9189,-57.7148 dDocent_Contig_8628 10 . T A 156.953 . AB=0.0921659;ABP=943.518;AC=2;AF=0.166667;AN=12;AO=105;CIGAR=1X;DP=2120;DPB=2120;DPRA=1.11585;EPP=231.015;EPPR=4374.18;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999503;PAO=0;PQA=0;PQR=0;PRO=0;QA=4190;QR=80531;RO=2013;RPL=0;RPP=231.015;RPPR=4374.18;RPR=105;RUN=1;SAF=105;SAP=231.015;SAR=0;SRF=2013;SRP=4374.18;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:328:296,32:296:11864:32:1280:-16.7285,0,-968.152 0/0:461:437,23:437:17447:23:924:0,-55.4211,-1485.32 0/0:352:330,22:330:13235:22:885:0,-26.0043,-1110.18 0/1:323:295,28:295:11785:28:1101:-2.13905,0,-962.58 0/0:371:371,0:371:14885:0:0:0,-111.682,-1338.47 0/0:285:284,0:284:11315:0:0:0,-85.4925,-1017.23 dDocent_Contig_8629 9 . T C 5423.06 . AB=0.44697;ABP=12.6832;AC=7;AF=0.583333;AN=12;AO=177;CIGAR=1X12M;DP=396;DPB=397.846;DPRA=0;EPP=387.361;EPPR=261.416;GTI=0;LEN=1;MEANALT=5.5;MQM=60;MQMR=60;NS=6;NUMALT=7;ODDS=5.55112e-17;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6788;QR=4622;RO=119;RPL=0;RPP=387.361;RPPR=261.416;RPR=177;RUN=1;SAF=177;SAP=387.361;SAR=0;SRF=119;SRP=261.416;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:78:35,7,5,0,0,6,0,21:35:1367:7,5,0,0,6,0,21:271,110,0,0,130,0,817:-56.6586,-44.9252,-155.229,-60.1675,-150.303,-171.059,-67.1946,-157.337,-172.564,-179.599,-67.1946,-157.337,-172.564,-179.599,-179.599,-58.9426,-149.076,-164.305,-171.337,-171.337,-169.531,-67.1946,-157.337,-172.564,-179.599,-179.599,-171.337,-179.599,0,-90.1792,-105.413,-112.444,-112.444,-104.187,-112.444,-106.122 0|1:82:28,6,0,0,0,0,4,37:28:1090:6,0,0,0,0,4,37:240,0,0,0,0,154,1404:-106.684,-95.3407,-183.119,-115.113,-184.925,-204.697,-115.113,-184.925,-204.697,-204.697,-115.113,-184.925,-204.697,-204.697,-204.697,-115.113,-184.925,-204.697,-204.697,-204.697,-204.697,-102.469,-172.281,-192.052,-192.052,-192.052,-192.052,-190.848,0,-69.8086,-89.5807,-89.5807,-89.5807,-89.5807,-76.9365,-78.4425 0|1:44:8,3,5,0,0,4,0,22:8:294:3,5,0,0,4,0,22:117,124,0,0,67,0,854:-67.8438,-60.63,-83.7677,-61.9667,-76.3831,-84.4978,-70.252,-84.6707,-86.0029,-94.2914,-70.252,-84.6707,-86.0029,-94.2914,-94.2914,-66.5068,-80.9224,-82.258,-90.5418,-90.5418,-89.3377,-70.252,-84.6707,-86.0029,-94.2914,-94.2914,-90.5418,-94.2914,0,-14.4423,-15.7929,-24.0741,-24.0741,-20.3393,-24.0741,-17.4515 0|1:76:41,7,0,0,0,1,1,26:41:1604:7,0,0,0,1,1,26:273,0,0,0,22,40,994:-69.229,-59.1282,-188.908,-81.5712,-191.015,-213.456,-81.5712,-191.015,-213.456,-213.456,-81.5712,-191.015,-213.456,-213.456,-213.456,-80.1675,-189.609,-212.049,-212.049,-212.049,-211.748,-78.2755,-187.72,-210.161,-210.161,-210.161,-208.754,-209.86,0,-109.456,-131.896,-131.896,-131.896,-130.491,-128.601,-124.07 1|1:52:0,0,7,0,0,6,10,28:0:0:0,7,0,0,6,10,28:0,203,0,0,125,388,1051:-118.074,-118.074,-118.074,-103.818,-103.818,-101.711,-118.074,-118.074,-103.818,-118.074,-118.074,-118.074,-103.818,-118.074,-118.074,-110.265,-110.265,-96.0146,-110.265,-110.265,-108.459,-86.1835,-86.1835,-71.9287,-86.1835,-86.1835,-78.3784,-83.1732,-31.945,-31.945,-17.6912,-31.945,-31.945,-24.154,0,-23.5162 0|1:64:7,0,0,4,4,4,0,43:7:267:0,0,4,4,4,0,43:0,0,152,151,76,0,1668:-135.039,-137.146,-159.053,-137.146,-159.053,-159.053,-124.679,-146.587,-146.587,-145.383,-132.619,-154.525,-154.525,-142.059,-153.321,-132.596,-154.502,-154.502,-142.036,-149.975,-153.297,-137.146,-159.053,-159.053,-146.587,-154.525,-154.502,-159.053,0,-21.946,-21.946,-9.46197,-17.4369,-17.4137,-21.946,-9.00171 dDocent_Contig_8630 18 . T C 22005.5 . AB=0.542942;ABP=24.4574;AC=6;AF=0.5;AN=12;AO=727;CIGAR=1X;DP=1339;DPB=1339;DPRA=0;EPP=1581.67;EPPR=1329.78;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99509;PAO=0;PQA=0;PQR=0;PRO=0;QA=29060;QR=24458;RO=611;RPL=0;RPP=1581.67;RPPR=1329.78;RPR=727;RUN=1;SAF=727;SAP=1581.67;SAR=0;SRF=611;SRP=1329.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:189:80,108:80:3233:108:4305:-330.688,0,-234.311 0/1:207:150,57:150:5950:57:2297:-144.566,0,-472.962 0/1:179:115,64:115:4617:64:2536:-174.486,0,-361.552 0/1:194:112,82:112:4494:82:3292:-237.923,0,-345.967 0/1:267:69,198:69:2761:198:7907:-630.808,0,-168.224 0/1:303:85,218:85:3403:218:8723:-693.304,0,-215.091 dDocent_Contig_8631 7 . C G 514.741 . AB=0.170391;ABP=340.838;AC=5;AF=0.416667;AN=12;AO=65;CIGAR=1X;DP=455;DPB=455;DPRA=0;EPP=144.156;EPPR=847.713;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.938462;PAIREDR=0.958869;PAO=0;PQA=0;PQR=0;PRO=0;QA=1965;QR=14786;RO=389;RPL=0;RPP=144.156;RPPR=847.713;RPR=65;RUN=1;SAF=65;SAP=144.156;SAR=0;SRF=389;SRP=847.713;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:67:58,9:58:2224:9:267:-4.14613,0,-180.213 0/1:97:79,17:79:3016:17:560:-21.6011,0,-242.511 0/1:60:49,11:49:1866:11:346:-13.3749,0,-150.121 0/0:97:93,4:93:3538:4:110:0,-19.029,-308.372 0/1:58:49,9:49:1810:9:230:-3.48844,0,-145.686 0/1:76:61,15:61:2332:15:452:-18.0824,0,-187.219 dDocent_Contig_8632 10 . T G 1121.94 . AB=0.325758;ABP=37.8197;AC=2;AF=0.166667;AN=12;AO=44;CIGAR=1X;DP=220;DPB=220;DPRA=2.60656;EPP=98.5551;EPPR=385.189;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1758;QR=7068;RO=176;RPL=0;RPP=98.5551;RPPR=385.189;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=176;SRP=385.189;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:26,1:26:1018:1:41:0,-4.03324,-87.8134 0/0:15:15,0:15:596:0:0:0,-4.51545,-53.9757 0/0:20:20,0:20:803:0:0:0,-6.0206,-72.587 0/0:26:26,0:26:1050:0:0:0,-7.82678,-94.7904 0/1:44:32,12:32:1298:12:480:-30.3066,0,-103.836 0/1:88:57,31:57:2303:31:1237:-85.1091,0,-180.927 dDocent_Contig_8633 98 . N T 81.191 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=87;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:87:-8.11856,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_8634 13 . C T 4369.69 . AB=0.0901213;ABP=844.988;AC=1;AF=0.0833333;AN=12;AO=52;CIGAR=5M1X5M;DP=755;DPB=573.182;DPRA=0;EPP=115.927;EPPR=980.173;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2085;QR=17607;RO=450;RPL=0;RPP=115.927;RPPR=980.173;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=450;SRP=980.173;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:114:56,8,21,28:56:2188:8,21,28:316,736,1130:-76.3136,-67.1654,-244.635,-33.3039,-187.167,-206.849,0,-153.886,-120.016,-171.463 0|0:135:72,36,23,4:72:2820:36,23,4:1395,782,161:-92.9415,0,-221.08,-51.2107,-168.506,-276.175,-101.344,-218.647,-269.829,-332.039 0|0:198:131,33,18,16:131:5137:33,18,16:1288,659,632:-66.4483,0,-412.521,-52.0316,-368.6,-469.059,-53.8803,-370.455,-422.477,-471.517 0|0:130:75,16,34,4:75:2934:16,34,4:625,1178,162:-73.1332,-44.3175,-280.762,0,-189.854,-231,-82.3488,-272.219,-227.877,-322.398 0|0:87:63,0,23,0:63:2457:0,23,0:0,822,0:-48.2901,-67.255,-269.244,0,-202.233,-195.309,-67.255,-269.244,-202.233,-269.244 0|0:91:53,0,37,0:53:2071:0,37,0:0,1314,0:-91.0647,-107.019,-277.3,0,-170.251,-159.113,-107.019,-277.3,-170.251,-277.3 dDocent_Contig_8635 1 . N G 110.95 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=119;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:119:-11.0945,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_8636 30 . T G 1202.52 . AB=0.246575;ABP=125.178;AC=2;AF=0.166667;AN=12;AO=55;CIGAR=1X;DP=860;DPB=860;DPRA=0.744422;EPP=122.441;EPPR=1751.05;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.987578;PAO=0;PQA=0;PQR=0;PRO=0;QA=2139;QR=31988;RO=805;RPL=0;RPP=122.441;RPPR=1751.05;RPR=55;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=805;SRP=1751.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:126:126,0:126:5026:0:0:0,-37.9298,-452.228 0/0:190:190,0:190:7499:0:0:0,-57.1957,-674.543 0/0:148:147,1:147:5889:1:41:0,-40.4579,-525.703 0/0:177:177,0:177:7042:0:0:0,-53.2823,-633.449 0/1:91:51,40:51:2002:40:1546:-111.985,0,-152.977 0/1:128:114,14:114:4530:14:552:-11.4884,0,-369.102 dDocent_Contig_8637 17 . C A 3211.68 . AB=0.406667;ABP=25.7094;AC=4;AF=0.333333;AN=12;AO=133;CIGAR=1X;DP=521;DPB=521;DPRA=0;EPP=291.816;EPPR=845.542;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994845;PAO=0;PQA=0;PQR=0;PRO=0;QA=5058;QR=13520;RO=388;RPL=0;RPP=291.816;RPPR=845.542;RPR=133;RUN=1;SAF=133;SAP=291.816;SAR=0;SRF=388;SRP=845.542;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:135:128,7:128:4446:7:263:0,-16.6109,-376.268 0/1:143:110,33:110:3815:33:1280:-72.4365,0,-300.493 0/0:86:82,4:82:2863:4:156:0,-11.4716,-243.48 0/1:63:56,7:56:1981:7:273:-5.97061,0,-159.59 0/1:51:7,44:7:243:44:1679:-136.012,0,-6.85541 0/1:43:5,38:5:172:38:1407:-113.961,0,-2.87345 dDocent_Contig_8638 40 . C T 120.607 . AB=0.285714;ABP=11.386;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=275;DPB=275;DPRA=0.5;EPP=18.2106;EPPR=584.965;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.847015;PAO=0;PQA=0;PQR=0;PRO=0;QA=255;QR=10667;RO=268;RPL=0;RPP=18.2106;RPPR=584.965;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=268;SRP=584.965;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:15,6:15:593:6:214:-13.2826,0,-47.3831 0/0:49:49,0:49:1959:0:0:0,-14.7505,-176.51 0/0:34:33,1:33:1315:1:41:0,-6.14045,-114.518 0/0:48:48,0:48:1894:0:0:0,-14.4494,-170.673 0/0:56:56,0:56:2234:0:0:0,-16.8577,-201.233 0/0:67:67,0:67:2672:0:0:0,-20.169,-240.604 dDocent_Contig_8639 35 . C T 296.956 . AB=0.182609;ABP=103.634;AC=2;AF=0.166667;AN=12;AO=21;CIGAR=1X;DP=409;DPB=409;DPRA=0.782313;EPP=48.6112;EPPR=785.837;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.6134;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.857143;PAIREDR=0.920103;PAO=0;PQA=0;PQR=0;PRO=0;QA=743;QR=15363;RO=388;RPL=0;RPP=48.6112;RPPR=845.542;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=381;SRP=785.837;SRR=7;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:72:59,13:59:2333:13:465:-20.51,0,-188.458 0/0:109:109,0:109:4309:0:0:0,-32.8123,-387.777 0/0:56:56,0:56:2210:0:0:0,-16.8577,-199.073 0/0:82:82,0:82:3266:0:0:0,-24.6845,-286.359 0/1:43:35,8:35:1389:8:278:-12.4074,0,-112.32 0/0:47:47,0:47:1856:0:0:0,-14.1484,-167.244 dDocent_Contig_8640 41 . T C 366.488 . AB=0.464286;ABP=3.32051;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=197;DPB=197;DPRA=0.828402;EPP=31.2394;EPPR=402.561;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.961957;PAO=0;PQA=0;PQR=0;PRO=0;QA=514;QR=7345;RO=184;RPL=0;RPP=31.2394;RPPR=402.561;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=184;SRP=402.561;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:43:43,0:43:1708:0:0:0,-12.9443,-153.943 0/0:38:38,0:38:1527:0:0:0,-11.4391,-137.669 0/0:31:31,0:31:1234:0:0:0,-9.33193,-111.332 0/0:40:40,0:40:1598:0:0:0,-12.0412,-144.056 0/0:17:17,0:17:684:0:0:0,-5.11751,-61.8901 0/1:28:15,13:15:594:13:514:-38.1716,0,-45.3623 dDocent_Contig_8642 8 . A G 245.603 . AB=0.142857;ABP=158.115;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=403;DPB=403;DPRA=1.06464;EPP=46.4397;EPPR=834.684;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.3;PAIREDR=0.511749;PAO=0;PQA=0;PQR=0;PRO=0;QA=769;QR=14629;RO=383;RPL=0;RPP=46.4397;RPPR=834.684;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=383;SRP=834.684;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:70:70,0:70:2672:0:0:0,-21.0721,-240.672 0/0:89:89,0:89:3393:0:0:0,-26.7917,-305.508 0/0:50:50,0:50:1918:0:0:0,-15.0515,-172.865 0/0:54:54,0:54:2067:0:0:0,-16.2556,-186.264 0/1:70:63,7:63:2388:7:273:-3.86591,0,-194.063 0/1:70:57,13:57:2191:13:496:-23.9153,0,-176.343 dDocent_Contig_8643 47 . T G 968.954 . AB=0.293233;ABP=52.3991;AC=2;AF=0.166667;AN=12;AO=51;CIGAR=1X;DP=367;DPB=367;DPRA=0;EPP=113.755;EPPR=687.024;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.882353;PAIREDR=0.834921;PAO=0;PQA=0;PQR=0;PRO=0;QA=2024;QR=12464;RO=315;RPL=0;RPP=113.755;RPPR=687.024;RPR=51;RUN=1;SAF=51;SAP=113.755;SAR=0;SRF=315;SRP=687.024;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:57:54,3:54:2129:3:121:0,-5.87851,-180.506 0/0:81:79,2:79:3104:2:80:0,-16.7916,-271.845 0/0:45:42,3:42:1660:3:122:0,-2.17386,-138.253 0/0:51:47,4:47:1864:4:153:0,-1.21458,-153.826 0/1:67:43,23:43:1720:23:910:-62.2299,0,-135.053 0/1:66:50,16:50:1987:16:638:-37.8873,0,-159.156 dDocent_Contig_8644 52 . A C 994.845 . AB=0.148676;ABP=529.404;AC=5;AF=0.416667;AN=12;AO=81;CIGAR=1X;DP=609;DPB=609;DPRA=0;EPP=178.9;EPPR=1006.64;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.950617;PAIREDR=0.992424;PAO=0;PQA=0;PQR=0;PRO=0;QA=3149;QR=20861;RO=528;RPL=81;RPP=178.9;RPPR=1006.64;RPR=0;RUN=1;SAF=81;SAP=178.9;SAR=0;SRF=528;SRP=1149.55;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:101:76,25:76:3005:25:992:-59.1762,0,-240.147 0/0:118:110,8:110:4322:8:317:0,-6.62675,-360.041 0/1:73:64,9:64:2532:9:309:-6.15077,0,-206.045 0/1:117:104,13:104:4099:13:525:-12.3767,0,-333.676 0/1:101:89,12:89:3513:12:477:-12.8723,0,-285.816 0/1:99:85,14:85:3390:14:529:-18.1304,0,-275.349 dDocent_Contig_8646 98 . N C 56.9435 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=56;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:8:-0.799998,-0.30103,0 1/1:2:0,2:0:0:2:48:-4.55869,-0.60206,0 dDocent_Contig_8647 47 . T G 3102.31 . AB=0.465812;ABP=5.38593;AC=5;AF=0.416667;AN=12;AO=115;CIGAR=1X;DP=327;DPB=327;DPRA=0;EPP=252.73;EPPR=463.362;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.991304;PAIREDR=0.971698;PAO=0;PQA=0;PQR=0;PRO=0;QA=4545;QR=8437;RO=212;RPL=0;RPP=252.73;RPPR=463.362;RPR=115;RUN=1;SAF=115;SAP=252.73;SAR=0;SRF=212;SRP=463.362;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:31,11:31:1212:11:442:-27.491,0,-96.7036 0/0:93:87,6:87:3470:6:230:0,-6.93552,-291.274 0/1:44:36,8:36:1443:8:311:-15.1039,0,-116.873 0/1:43:32,11:32:1270:11:431:-26.1994,0,-101.619 0/1:41:12,29:12:476:29:1158:-92.1587,0,-30.8487 0/1:64:14,50:14:566:50:1973:-158.5,0,-32.0163 dDocent_Contig_8648 32 . C A 2321.32 . AB=0.409756;ABP=17.5115;AC=5;AF=0.416667;AN=12;AO=85;CIGAR=1X;DP=238;DPB=238;DPRA=0;EPP=187.585;EPPR=335.246;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.952941;PAIREDR=0.875817;PAO=0;PQA=0;PQR=0;PRO=0;QA=3390;QR=5831;RO=153;RPL=0;RPP=187.585;RPPR=335.246;RPR=85;RUN=1;SAF=85;SAP=187.585;SAR=0;SRF=153;SRP=335.246;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:32,1:32:1203:1:41:0,-5.83942,-104.473 0/1:40:31,9:31:1190:9:350:-19.8146,0,-95.3553 0/1:45:21,24:21:814:24:953:-72.5284,0,-60.0348 0/1:38:30,8:30:1134:8:326:-18.2707,0,-90.9236 0/1:31:15,16:15:576:16:643:-48.8735,0,-42.8468 0/1:51:24,27:24:914:27:1077:-81.867,0,-67.2249 dDocent_Contig_8649 20 . T G 636.813 . AB=0.210884;ABP=109.737;AC=4;AF=0.333333;AN=12;AO=32;CIGAR=1X;DP=247;DPB=247;DPRA=1.44667;EPP=72.4974;EPPR=469.877;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.25;PAIREDR=0.632558;PAO=0;PQA=0;PQR=0;PRO=0;QA=1304;QR=8532;RO=215;RPL=0;RPP=72.4974;RPPR=469.877;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=215;SRP=469.877;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:70:69,1:69:2720:1:41:0,-16.9775,-240.829 0/1:56:42,14:42:1667:14:570:-34.7845,0,-133.403 0/1:26:20,6:20:789:6:244:-14.512,0,-63.4968 0/1:29:23,6:23:932:6:245:-13.6996,0,-75.451 0/0:30:30,0:30:1188:0:0:0,-9.0309,-107.195 0/1:36:31,5:31:1236:5:204:-7.90695,0,-100.671 dDocent_Contig_8650 58 . C T 75.0132 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=2;CIGAR=1X;DP=140;DPB=140;DPRA=0.0724638;EPP=7.35324;EPPR=302.673;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=74;QR=5386;RO=138;RPL=2;RPP=7.35324;RPPR=302.673;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=138;SRP=302.673;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:372:0:0:0,-3.0103,-33.8161 0/0:52:52,0:52:2038:0:0:0,-15.6536,-183.614 0/0:10:10,0:10:395:0:0:0,-3.0103,-35.9064 0/0:26:26,0:26:1021:0:0:0,-7.82678,-92.1892 1/1:2:0,2:0:0:2:74:-7.02402,-0.60206,0 0/0:40:40,0:40:1560:0:0:0,-12.0412,-140.646 dDocent_Contig_8651 21 . A T 40.139 . AB=0.128205;ABP=49.8362;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=187;DPB=187;DPRA=1.31757;EPP=13.8677;EPPR=398.218;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.873626;PAO=0;PQA=0;PQR=0;PRO=0;QA=188;QR=7193;RO=182;RPL=0;RPP=13.8677;RPPR=398.218;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=182;SRP=398.218;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:52:52,0:52:2050:0:0:0,-15.6536,-184.689 0/0:39:39,0:39:1545:0:0:0,-11.7402,-139.292 0/0:22:22,0:22:871:0:0:0,-6.62266,-78.6992 0/0:24:24,0:24:945:0:0:0,-7.22472,-85.3552 0/1:39:34,5:34:1348:5:188:-5.53673,0,-109.843 0/0:11:11,0:11:434:0:0:0,-3.31133,-39.4131 dDocent_Contig_8652 57 . G A 63.3639 . AB=0.16129;ABP=33.9012;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=1X;DP=388;DPB=388;DPRA=0.25974;EPP=18.2106;EPPR=830.341;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.979003;PAO=0;PQA=0;PQR=0;PRO=0;QA=283;QR=14954;RO=381;RPL=7;RPP=18.2106;RPPR=830.341;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=381;SRP=830.341;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:14:11,3:11:428:3:119:-6.88059,0,-34.6526 0/0:34:34,0:34:1324:0:0:0,-10.235,-119.42 0/1:17:15,2:15:596:2:82:-2.66217,0,-48.8614 0/0:49:47,2:47:1841:2:82:0,-6.97079,-158.123 0/0:159:159,0:159:6283:0:0:0,-47.8638,-565.232 0/0:115:115,0:115:4482:0:0:0,-34.6184,-403.337 dDocent_Contig_8653 38 . C T 52.7415 . AB=0.0774648;ABP=223.216;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=4M1X2M;DP=332;DPB=323.429;DPRA=1.83803;EPP=35.5824;EPPR=656.623;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.466667;PAIREDR=0.435216;PAO=0;PQA=0;PQR=0;PRO=0;QA=576;QR=11894;RO=301;RPL=0;RPP=35.5824;RPPR=656.623;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=301;SRP=656.623;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:50:48,0,2,0:48:1896:0,2,0:0,68,0:0,-14.4494,-170.518,-8.59357,-165.004,-164.402,-14.4494,-170.518,-165.004,-170.518 0|0:91:78,8,5,0:78:3068:8,5,0:300,195,0:-1.07413,0,-249.956,-8.52049,-236.336,-259.393,-24.5545,-252.364,-260.898,-276.926 0|0:69:63,4,2,0:63:2485:4,2,0:155,80,0:0,-6.23917,-209.483,-12.3706,-204.097,-216.228,-18.9649,-210.687,-216.83,-223.421 0|1:51:41,0,6,4:41:1634:0,6,4:0,233,163:-6.78853,-19.1308,-153.694,0,-134.553,-132.747,-5.67581,-140.246,-121.105,-139.042 0|0:36:36,0,0,0:36:1431:0,0,0:0,0,0:0,-10.8371,-129.051,-10.8371,-129.051,-129.051,-10.8371,-129.051,-129.051,-129.051 0|0:35:35,0,0,0:35:1380:0,0,0:0,0,0:0,-10.536,-124.469,-10.536,-124.469,-124.469,-10.536,-124.469,-124.469,-124.469 dDocent_Contig_8654 47 . C T 490.762 . AB=0.138577;ABP=305.951;AC=3;AF=0.25;AN=12;AO=47;CIGAR=1X;DP=481;DPB=481;DPRA=0;EPP=105.07;EPPR=945.429;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.723404;PAIREDR=0.587558;PAO=0;PQA=0;PQR=0;PRO=0;QA=1878;QR=17275;RO=434;RPL=0;RPP=105.07;RPPR=945.429;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=434;SRP=945.429;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:57:56,1:56:2246:1:41:0,-13.0641,-198.203 0/1:94:81,13:81:3223:13:510:-17.948,0,-261.831 0/0:83:77,6:77:3092:6:241:0,-2.91969,-256.283 0/1:81:65,16:65:2579:16:648:-34.2701,0,-207.861 0/1:92:84,8:84:3334:8:326:-2.01511,0,-272.393 0/0:74:71,3:71:2801:3:112:0,-11.8334,-241.76 dDocent_Contig_8655 26 . T A 252.793 . AB=0.180328;ABP=57.1547;AC=7;AF=0.583333;AN=12;AO=14;CIGAR=1X;DP=64;DPB=64;DPRA=0;EPP=33.4109;EPPR=111.584;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.86;PAO=0;PQA=0;PQR=0;PRO=0;QA=557;QR=1985;RO=50;RPL=0;RPP=33.4109;RPPR=111.584;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=50;SRP=111.584;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:15:13,2:13:522:2:81:-3.17028,0,-42.8108 0/1:8:7,1:7:286:1:41:-1.68633,0,-23.7066 0/1:10:7,3:7:285:3:123:-8.45449,0,-23.0141 0/1:11:8,3:8:319:3:121:-7.96866,0,-25.7638 0/1:17:15,2:15:573:2:76:-2.09603,0,-46.7743 1/1:3:0,3:0:0:3:115:-10.7232,-0.90309,0 dDocent_Contig_8657 8 . A T 983.834 . AB=0.306569;ABP=47.5334;AC=2;AF=0.166667;AN=12;AO=42;CIGAR=2X;DP=456;DPB=456;DPRA=0.858934;EPP=94.2121;EPPR=880.285;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9183;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.75495;PAO=0;PQA=0;PQR=0;PRO=0;QA=1580;QR=15328;RO=404;RPL=0;RPP=94.2121;RPPR=880.285;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=404;SRP=880.285;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:97:97,0,0:97:3685:0,0:0,0:0,-29.1999,-331.774,-29.1999,-331.774,-331.774 0|0:102:99,0,2:99:3735:0,2:0,78:0,-29.802,-335.97,-23.1971,-329.558,-328.956 0|0:66:59,0,5:59:2225:0,5:0,194:0,-17.7608,-200.01,-1.80795,-184.069,-182.564 0|0:54:54,0,0:54:2077:0,0:0,0:0,-16.2556,-187.164,-16.2556,-187.164,-187.164 0|1:81:53,28,0:53:2002:28,0:1058,0:-71.1429,0,-156.032,-87.0975,-164.46,-251.18 0|1:56:42,14,0:42:1604:14,0:522,0:-30.4623,0,-127.765,-43.1056,-131.979,-174.71 dDocent_Contig_8658 27 . C G 31.4342 . AB=0.121212;ABP=44.1367;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=869;DPB=869;DPRA=1.04626;EPP=22.5536;EPPR=1861.79;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.888889;PAIREDR=0.940421;PAO=0;PQA=0;PQR=0;PRO=0;QA=338;QR=34411;RO=856;RPL=0;RPP=22.5536;RPPR=1861.79;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=856;SRP=1861.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:114:114,0:114:4599:0:0:0,-34.3174,-413.814 0/0:176:174,2:174:6997:2:82:0,-45.2016,-621.607 0/1:33:29,4:29:1180:4:158:-4.66598,0,-96.5392 0/0:153:149,1:149:6015:1:41:0,-41.4569,-537.045 0/0:226:224,2:224:9014:2:57:0,-62.623,-805.265 0/0:167:166,0:166:6606:0:0:0,-49.971,-593.842 dDocent_Contig_8659 33 . C T 115.859 . AB=0.166667;ABP=43.5445;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=217;DPB=217;DPRA=1.16923;EPP=31.2394;EPPR=445.991;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.647059;PAO=0;PQA=0;PQR=0;PRO=0;QA=527;QR=8107;RO=204;RPL=0;RPP=31.2394;RPPR=445.991;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=204;SRP=445.991;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:33,2:33:1337:2:82:0,-2.75637,-112.808 0/0:40:38,2:38:1529:2:82:0,-4.26152,-130.067 0/1:42:35,7:35:1394:7:282:-13.1088,0,-113.074 0/0:35:33,2:33:1271:2:81:0,-2.85032,-106.961 0/0:42:42,0:42:1659:0:0:0,-12.6433,-149.536 0/0:23:23,0:23:917:0:0:0,-6.92369,-82.8354 dDocent_Contig_8660 96 . T G 7239.07 . AB=0.124481;ABP=298.195;AC=6;AF=0.5;AN=12;AO=292;CIGAR=1X;DP=708;DPB=708;DPRA=0;EPP=637.08;EPPR=902;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.804795;PAIREDR=0.949275;PAO=0;PQA=0;PQR=0;PRO=0;QA=9672;QR=10583;RO=414;RPL=292;RPP=637.08;RPPR=902;RPR=0;RUN=1;SAF=292;SAP=637.08;SAR=0;SRF=414;SRP=902;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:99:93,6:93:2274:6:150:0,-16.0558,-191.132 0/1:176:153,23:153:3899:23:791:-18.5272,0,-298.142 0/1:65:56,7:56:1493:7:241:-2.72847,0,-115.324 0/0:107:97,10:97:2581:10:310:0,-4.00854,-204.325 1/1:128:2,126:2:63:126:4142:-367.004,-32.5482,0 1/1:133:13,120:13:273:120:4038:-338.856,-15.2595,0 dDocent_Contig_8661 7 . C A 58.9254 . AB=0.2;ABP=22.5536;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X2M1X1M1X;DP=134;DPB=134;DPRA=0.653465;EPP=16.0391;EPPR=278.787;GTI=0;LEN=1;MEANALT=1;MQM=35.6667;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.984252;PAO=0;PQA=0;PQR=0;PRO=0;QA=233;QR=4928;RO=127;RPL=0;RPP=16.0391;RPPR=278.787;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=127;SRP=278.787;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:6:6,0:6:231:0:0:0,-1.80618,-21.1573 0|0:7:7,0:7:270:0:0:0,-2.10721,-24.665 0|0:8:7,1:7:274:1:39:0,-1.50862,-24.1288 0|1:25:20,5:20:780:5:194:-7.41538,0,-63.001 0|0:58:57,0:57:2212:0:0:0,-17.1587,-198.89 0|0:30:30,0:30:1161:0:0:0,-9.0309,-104.785 dDocent_Contig_8662 72 . A G 150.453 . AB=0.444444;ABP=3.49285;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=82;DPB=82;DPRA=1.40625;EPP=20.3821;EPPR=163.699;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=241;QR=2360;RO=74;RPL=8;RPP=20.3821;RPPR=163.699;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=74;SRP=163.699;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:594:0:0:0,-5.41854,-53.774 0/0:2:2,0:2:66:0:0:0,-0.60206,-6.26836 0/0:9:9,0:9:272:0:0:0,-2.70927,-24.7758 0/0:9:9,0:9:280:0:0:0,-2.70927,-25.5047 0/1:18:10,8:10:327:8:241:-16.568,0,-24.33 0/0:26:26,0:26:821:0:0:0,-7.82678,-74.1874 dDocent_Contig_8663 50 . C T 94.2253 . AB=0.1875;ABP=16.582;AC=3;AF=0.25;AN=12;AO=11;CIGAR=1X;DP=212;DPB=212;DPRA=2.08537;EPP=26.8965;EPPR=437.305;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995;PAO=0;PQA=0;PQR=0;PRO=0;QA=450;QR=7982;RO=200;RPL=11;RPP=26.8965;RPPR=437.305;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=200;SRP=437.305;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:76:74,2:74:2967:2:82:0,-15.0986,-259.336 0/0:78:73,5:73:2913:5:205:0,-4.64533,-243.431 0/0:36:35,0:35:1393:0:0:0,-10.536,-125.229 0/1:16:13,3:13:508:3:123:-6.64831,0,-41.2401 1/1:1:0,1:0:0:1:40:-3.99568,-0.30103,0 0/0:5:5,0:5:201:0:0:0,-1.50515,-18.4707 dDocent_Contig_8665 29 . T G 3187.81 . AB=0.195122;ABP=69.2137;AC=2;AF=0.166667;AN=12;AO=56;CIGAR=2X;DP=698;DPB=698;DPRA=0.468401;EPP=124.613;EPPR=1188.63;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2162;QR=21845;RO=546;RPL=0;RPP=124.613;RPPR=1188.63;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=546;SRP=1188.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:113:93,0,20:93:3697:0,20:0,774:-35.9582,-63.954,-368.324,0,-304.758,-298.738 0|0:190:153,0,37:153:6168:0,37:0,1431:-71.8546,-117.912,-626.328,0,-508.805,-497.667 0|0:106:104,0,2:104:4146:0,2:0,75:0,-31.3071,-372.738,-24.7896,-366.596,-365.994 0|0:163:157,0,6:157:6266:0,6:0,243:0,-47.2617,-563.293,-26.8203,-543.256,-541.45 0|0:82:36,16,30:36:1447:16,30:620,1204:-88.3769,-48.2879,-162.713,0,-68.3246,-110.22 1|1:44:3,40,0:3:121:40,0:1542,0:-127.813,-1.89252,0,-128.717,-12.0412,-138.692 dDocent_Contig_8666 29 . A G 30805.9 . AB=0.69708;ABP=95.4485;AC=6;AF=0.5;AN=12;AO=191;CIGAR=4M2I11M1X5M;DP=1186;DPB=1288.95;DPRA=0;EPP=417.762;EPPR=194.1;GTI=0;LEN=1;MEANALT=6;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7257;QR=3433;RO=88;RPL=0;RPP=417.762;RPPR=194.1;RPR=191;RUN=1;SAF=191;SAP=417.762;SAR=0;SRF=88;SRP=194.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:241:36,188,0,0,7:36:1391:188,0,0,7:7338,0,0,255:-592.32,0,-57.6485,-603.157,-114.242,-717.394,-603.157,-114.242,-717.394,-717.394,-582.338,-93.4251,-696.574,-696.574,-694.467 0|1:176:18,138,0,0,16:18:706:138,0,0,16:5327,0,0,601:-432.005,0,-16.5225,-437.424,-58.0646,-495.483,-437.424,-58.0646,-495.483,-495.483,-388.212,-8.85927,-446.272,-446.272,-441.455 1|0:275:10,237,0,0,27:10:392:237,0,0,27:9111,0,0,1041:-798.075,-53.2487,-14.1445,-801.086,-85.4886,-833.321,-801.086,-85.4886,-833.321,-833.321,-715.612,0,-747.848,-747.848,-739.72 0|1:220:19,178,0,0,13:19:746:178,0,0,13:6923,0,0,514:-563.157,0,-7.78341,-568.877,-61.3667,-630.232,-568.877,-61.3667,-630.232,-630.232,-526.578,-19.061,-587.933,-587.933,-584.02 1|0:149:0,8,102,12,22:0:0:8,102,12,22:305,3902,478,854:-390.318,-365.301,-362.893,-70.1658,-45.1484,-39.4608,-350.957,-325.94,-30.7989,-347.344,-320.16,-295.143,0,-280.797,-313.537 1|0:125:5,13,89,0,18:5:198:13,89,0,18:499,3355,0,715:-315.936,-276.485,-288.869,-42.5685,-17.9147,-32.0744,-317.441,-292.782,-58.8661,-333.739,-258.577,-233.918,0,-274.875,-269.456 dDocent_Contig_8667 104 . C T 746.989 . AB=0.423077;ABP=7.01917;AC=5;AF=0.416667;AN=12;AO=33;CIGAR=1X;DP=91;DPB=91;DPRA=1.2;EPP=74.6689;EPPR=128.956;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.810345;PAO=0;PQA=0;PQR=0;PRO=0;QA=1174;QR=2227;RO=58;RPL=0;RPP=74.6689;RPPR=128.956;RPR=33;RUN=1;SAF=0;SAP=74.6689;SAR=33;SRF=0;SRP=128.956;SRR=58;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:13:13,0:13:502:0:0:0,-3.91339,-45.5285 0/1:14:8,6:8:304:6:205:-14.5654,0,-23.5044 0/1:21:12,9:12:468:9:282:-19.3602,0,-36.1509 0/1:14:11,3:11:425:3:117:-6.69596,0,-34.3898 0/1:6:4,2:4:143:2:78:-5.59729,0,-11.4146 0/1:23:10,13:10:385:13:492:-37.7019,0,-28.0828 dDocent_Contig_8668 56 . A T 35.5239 . AB=0.121951;ABP=104.805;AC=3;AF=0.25;AN=12;AO=10;CIGAR=1X;DP=163;DPB=163;DPRA=1.01235;EPP=24.725;EPPR=335.246;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.915033;PAO=0;PQA=0;PQR=0;PRO=0;QA=354;QR=5258;RO=153;RPL=10;RPP=24.725;RPPR=335.246;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=153;SRP=335.246;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:20,3:20:675:3:104:-2.77912,0,-54.1398 0/0:28:28,0:28:976:0:0:0,-8.42884,-88.1527 0/1:20:17,3:17:598:3:107:-3.96157,0,-48.1289 0/1:39:35,4:35:1223:4:143:-1.48128,0,-98.6338 0/0:28:28,0:28:931:0:0:0,-8.42884,-84.0916 0/0:25:25,0:25:855:0:0:0,-7.52575,-77.2623 dDocent_Contig_8669 27 . C T 138.365 . AB=0.148649;ABP=82.3571;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=213;DPB=213;DPRA=1.26596;EPP=29.068;EPPR=437.305;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.96;PAO=0;PQA=0;PQR=0;PRO=0;QA=468;QR=7940;RO=200;RPL=0;RPP=29.068;RPPR=437.305;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=200;SRP=437.305;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:46:46,0:46:1816:0:0:0,-13.8474,-163.656 0/0:28:28,0:28:1121:0:0:0,-8.42884,-101.175 0/1:37:31,6:31:1222:6:233:-10.199,0,-99.1179 0/1:37:31,5:31:1215:5:194:-6.85927,0,-98.6946 0/0:20:20,0:20:783:0:0:0,-6.0206,-70.7851 0/0:45:44,1:44:1783:1:41:0,-9.45178,-156.585 dDocent_Contig_8671 14 . T C 13676.4 . AB=0.497859;ABP=3.0475;AC=6;AF=0.5;AN=12;AO=465;CIGAR=1X;DP=934;DPB=934;DPRA=0;EPP=1012.74;EPPR=1021.43;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.997849;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=18439;QR=17583;RO=469;RPL=0;RPP=1012.74;RPPR=1021.43;RPR=465;RUN=1;SAF=465;SAP=1012.74;SAR=0;SRF=469;SRP=1021.43;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:218:126,92:126:4702:92:3627:-260.829,0,-357.615 0/1:289:114,175:114:4342:175:6982:-541.061,0,-303.857 0/1:188:63,125:63:2346:125:4933:-387.271,0,-154.757 0/1:218:155,63:155:5795:63:2494:-158.983,0,-455.911 0/1:12:4,8:4:139:8:321:-25.6446,0,-9.23758 0/1:9:7,2:7:259:2:82:-5.07041,0,-20.9551 dDocent_Contig_8672 10 . A G 1582.89 . AB=0.292793;ABP=85.8001;AC=4;AF=0.333333;AN=12;AO=75;CIGAR=1X;DP=828;DPB=828;DPRA=0;EPP=165.871;EPPR=1638.13;GTI=0;LEN=1;MEANALT=1;MQM=53.8933;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2982;QR=30079;RO=753;RPL=0;RPP=165.871;RPPR=1638.13;RPR=75;RUN=1;SAF=75;SAP=165.871;SAR=0;SRF=753;SRP=1638.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:14,17:14:551:17:653:-49.5,0,-40.6004 0/1:47:39,8:39:1574:8:322:-15.0802,0,-127.746 0/1:104:77,27:77:3092:27:1083:-65.8574,0,-247.049 0/1:40:27,13:27:1096:13:522:-35.0732,0,-86.8826 0/0:362:356,6:356:14198:6:241:0,-86.9906,-1254.76 0/0:244:240,4:240:9568:4:161:0,-58.6464,-845.732 dDocent_Contig_8673 22 . C T 1446.19 . AB=0.305263;ABP=65.5944;AC=6;AF=0.5;AN=12;AO=58;CIGAR=1X;DP=190;DPB=190;DPRA=0;EPP=128.956;EPPR=289.645;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.568966;PAIREDR=0.583333;PAO=0;PQA=0;PQR=0;PRO=0;QA=2343;QR=5234;RO=132;RPL=0;RPP=128.956;RPPR=289.645;RPR=58;RUN=1;SAF=58;SAP=128.956;SAR=0;SRF=132;SRP=289.645;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:17,13:17:679:13:529:-38.926,0,-52.4078 0/1:38:25,13:25:997:13:519:-35.6164,0,-78.5888 0/1:30:19,11:19:766:11:444:-31.2847,0,-60.2303 0/1:37:28,9:28:1098:9:366:-22.167,0,-87.9716 0/1:30:26,4:26:1030:4:160:-5.75253,0,-83.9664 0/1:25:17,8:17:664:8:325:-22.0939,0,-52.5552 dDocent_Contig_8674 12 . C T 200.981 . AB=0.217949;ABP=56.9074;AC=1;AF=0.0833333;AN=12;AO=30;CIGAR=1X;DP=663;DPB=663;DPRA=0.619932;EPP=68.1545;EPPR=1375.38;GTI=0;LEN=1;MEANALT=1.25;MQM=29.9667;MQMR=57.7405;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.10443;PAO=0;PQA=0;PQR=0;PRO=0;QA=1209;QR=25419;RO=632;RPL=0;RPP=68.1545;RPPR=1375.38;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=632;SRP=1375.38;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:118:110,7:110:4422:7:276:0,-17.7338,-373.189 0/0:81:76,5:76:3053:5:197:0,-9.65168,-246.253 0/0:51:51,0:51:2067:0:0:0,-15.3525,-181.789 0/1:78:61,17:61:2455:17:695:-21.6209,0,-193.839 0/0:245:245,0:245:9854:0:0:0,-73.7523,-880.776 0/0:90:89,1:89:3568:1:41:0,-23.8566,-312.84 dDocent_Contig_8675 28 . C T 2462.09 . AB=0.330986;ABP=73.4761;AC=6;AF=0.5;AN=12;AO=94;CIGAR=1X;DP=284;DPB=284;DPRA=0;EPP=207.129;EPPR=415.59;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.670213;PAIREDR=0.921053;PAO=0;PQA=0;PQR=0;PRO=0;QA=3788;QR=7632;RO=190;RPL=0;RPP=207.129;RPPR=415.59;RPR=94;RUN=1;SAF=94;SAP=207.129;SAR=0;SRF=190;SRP=415.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:51:37,14:37:1475:14:556:-35.0238,0,-117.638 0/1:50:33,17:33:1337:17:683:-46.7479,0,-105.536 0/1:42:23,19:23:919:19:770:-56.977,0,-70.3716 0/1:34:20,14:20:798:14:562:-40.6875,0,-61.898 0/1:52:35,17:35:1405:17:687:-46.5052,0,-111.047 0/1:55:42,13:42:1698:13:530:-31.4898,0,-136.48 dDocent_Contig_8676 122 . A C 48292 . AB=0.0933852;ABP=372.085;AC=0;AF=0;AN=12;AO=29;CIGAR=1X3M1X;DP=1723;DPB=1723;DPRA=0.833087;EPP=65.983;EPPR=324.388;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1072;QR=5350;RO=148;RPL=0;RPP=65.983;RPPR=324.388;RPR=29;RUN=1;SAF=0;SAP=65.983;SAR=29;SRF=0;SRP=324.388;SRR=148;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:239:34,0,203:34:1242:0,203:0,7629:-614.758,-624.993,-726.476,0,-101.485,-40.3757 0|0:243:35,0,207:35:1248:0,207:0,7813:-629.773,-640.309,-742.037,0,-101.708,-39.3948 0|0:257:45,24,188:45:1632:24,188:884,7159:-573.663,-514.927,-640.955,0,-60.9675,-76.6596 0|0:307:23,5,276:23:831:5,276:188,10357:-856.705,-848.225,-914.547,-15.1925,-67.6736,0 0|0:308:11,0,297:11:397:0,297:0,10907:-945.27,-948.581,-980.981,-56.6447,-89.4059,0 0|0:369:0,0,366:0:0:0,366:0,13499:-1214.26,-1214.26,-1214.26,-110.177,-110.177,0 dDocent_Contig_8677 7 . C G 9327.07 . AB=0.331558;ABP=373.167;AC=5;AF=0.416667;AN=12;AO=504;CIGAR=2X;DP=1767;DPB=1767;DPRA=0;EPP=1097.43;EPPR=2686.95;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.968254;PAIREDR=0.983819;PAO=0;PQA=0;PQR=0;PRO=0;QA=15575;QR=46969;RO=1236;RPL=0;RPP=1097.43;RPPR=2686.95;RPR=504;RUN=1;SAF=504;SAP=1097.43;SAR=0;SRF=1236;SRP=2686.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:335:209,120:209:7922:120:3751:-238.493,0,-613.543 0|1:343:220,118:220:8378:118:3568:-219.344,0,-651.857 0|1:334:194,133:194:7396:133:4170:-276.811,0,-566.859 0|1:283:182,96:182:6894:96:2951:-181.914,0,-536.478 0|0:265:258,6:258:9828:6:170:0,-64.1164,-868.65 0|1:207:173,31:173:6551:31:965:-25.3673,0,-527.761 dDocent_Contig_8678 8 . A G 268.074 . AB=0.152672;ABP=140.277;AC=2;AF=0.166667;AN=12;AO=28;CIGAR=1X;DP=509;DPB=509;DPRA=0.717117;EPP=63.8115;EPPR=945.858;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.6736;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.968815;PAO=0;PQA=0;PQR=0;PRO=0;QA=1074;QR=18167;RO=481;RPL=0;RPP=63.8115;RPPR=1047.49;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=469;SRP=945.858;SRR=12;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:85:83,2:83:3127:2:76:0,-18.3729,-274.356 0/0:111:111,0:111:4228:0:0:0,-33.4143,-380.448 0/1:71:59,12:59:2247:12:466:-20.9189,0,-180.985 0/1:60:52,8:52:1935:8:298:-9.11033,0,-156.325 0/0:106:103,3:103:3908:3:117:0,-20.9988,-340.914 0/0:76:73,3:73:2722:3:117:0,-11.9679,-234.227 dDocent_Contig_8680 17 . T C 3892.17 . AB=0.558442;ABP=9.86313;AC=4;AF=0.333333;AN=12;AO=129;CIGAR=1X;DP=265;DPB=265;DPRA=3.39706;EPP=283.13;EPPR=298.331;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5166;QR=5475;RO=136;RPL=0;RPP=283.13;RPPR=298.331;RPR=129;RUN=1;SAF=129;SAP=283.13;SAR=0;SRF=136;SRP=298.331;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:45:18,27:18:723:27:1097:-85.4658,0,-51.8492 0/1:64:33,31:33:1316:31:1234:-92.0641,0,-99.4409 0/1:44:19,25:19:770:25:968:-74.1616,0,-56.375 0/1:78:32,46:32:1302:46:1867:-144.747,0,-93.9588 0/0:31:31,0:31:1242:0:0:0,-9.33193,-112.049 0/0:3:3,0:3:122:0:0:0,-0.90309,-11.3725 dDocent_Contig_8681 101 . N T 2659.79 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=88;CIGAR=7X;DP=88;DPB=88;DPRA=0;EPP=194.1;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=3.38813e-21;PAIRED=0.238636;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2930;QR=0;RO=0;RPL=0;RPP=194.1;RPPR=0;RPR=88;RUN=1;SAF=0;SAP=194.1;SAR=88;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:17:0,17:0:0:17:562:-50.8956,-5.11751,0 1|1:14:0,14:0:0:14:461:-41.8074,-4.21442,0 1|1:12:0,12:0:0:12:399:-36.2324,-3.61236,0 1|1:43:0,43:0:0:43:1442:-130.076,-12.9443,0 1|1:2:0,2:0:0:2:66:-6.26836,-0.60206,0 dDocent_Contig_8682 9 . G A 90.7605 . AB=0.109677;ABP=208.123;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=741;DPB=741;DPRA=0.52901;EPP=39.9253;EPPR=1575.16;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.998619;PAO=0;PQA=0;PQR=0;PRO=0;QA=647;QR=27629;RO=724;RPL=0;RPP=39.9253;RPPR=1575.16;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=724;SRP=1575.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:95:84,11:84:3214:11:420:-9.55401,0,-260.812 0/0:156:156,0:156:5986:0:0:0,-46.9607,-538.682 0/1:60:54,6:54:2059:6:227:-2.73064,0,-167.482 0/0:136:136,0:136:5196:0:0:0,-40.9401,-467.649 0/0:130:130,0:130:4961:0:0:0,-39.1339,-446.508 0/0:164:164,0:164:6213:0:0:0,-49.3689,-559.11 dDocent_Contig_8683 33 . G A 475.054 . AB=0.275362;ABP=33.2536;AC=1;AF=0.0833333;AN=12;AO=24;CIGAR=1X;DP=536;DPB=536;DPRA=0.619335;EPP=55.1256;EPPR=1114.8;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9512;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996094;PAO=0;PQA=0;PQR=0;PRO=0;QA=970;QR=20099;RO=512;RPL=0;RPP=55.1256;RPPR=1114.8;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=512;SRP=1114.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:64:64,0:64:2526:0:0:0,-19.2659,-227.064 0/0:121:121,0:121:4748:0:0:0,-36.4246,-427.266 0/0:146:146,0:146:5776:0:0:0,-43.9504,-519.642 0/0:75:72,3:72:2847:3:121:0,-11.2971,-245.061 0/1:69:50,19:50:1940:19:772:-49.0283,0,-154.04 0/0:61:59,2:59:2262:2:77:0,-11.0546,-196.434 dDocent_Contig_8684 71 . T A 97.7546 . AB=0.120879;ABP=116.619;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=398;DPB=398;DPRA=1.13386;EPP=29.068;EPPR=839.027;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.583333;PAIREDR=0.576623;PAO=0;PQA=0;PQR=0;PRO=0;QA=457;QR=14846;RO=385;RPL=12;RPP=29.068;RPPR=839.027;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=385;SRP=839.027;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:76:76,0:76:2850:0:0:0,-22.8783,-256.682 0/0:74:74,0:74:2776:0:0:0,-22.2762,-250.023 0/0:50:49,0:49:1912:0:0:0,-14.7505,-171.886 0/1:91:80,11:80:3126:11:426:-11.2983,0,-254.044 0/0:54:54,0:54:2135:0:0:0,-16.2556,-192.344 0/0:53:52,1:52:2047:1:31:0,-12.8551,-181.327 dDocent_Contig_8685 63 . A G 592.79 . AB=0.165354;ABP=250.079;AC=5;AF=0.416667;AN=12;AO=46;CIGAR=1X;DP=306;DPB=306;DPRA=0;EPP=86.2815;EPPR=567.593;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.413043;PAIREDR=0.992308;PAO=0;PQA=0;PQR=0;PRO=0;QA=1753;QR=9981;RO=260;RPL=46;RPP=102.898;RPPR=567.593;RPR=0;RUN=1;SAF=44;SAP=86.2815;SAR=2;SRF=260;SRP=567.593;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:61:55,6:55:2054:6:231:-2.79508,0,-166.739 0/1:49:37,12:37:1411:12:457:-26.7269,0,-112.523 0/1:12:10,2:10:388:2:75:-3.50644,0,-31.6614 0/1:30:23,7:23:905:7:256:-14.3527,0,-72.726 0/1:102:87,15:87:3327:15:572:-21.1058,0,-268.814 0/0:52:48,4:48:1896:4:162:0,-0.686604,-155.875 dDocent_Contig_8686 16 . A T 214.275 . AB=0.193548;ABP=53.5846;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=232;DPB=232;DPRA=0.770992;EPP=35.5824;EPPR=474.22;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.533333;PAIREDR=0.732719;PAO=0;PQA=0;PQR=0;PRO=0;QA=593;QR=8638;RO=217;RPL=0;RPP=35.5824;RPPR=474.22;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=217;SRP=474.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:14,7:14:563:7:279:-19.159,0,-44.6905 0/1:41:36,5:36:1426:5:194:-5.49015,0,-116.246 0/0:33:33,0:33:1320:0:0:0,-9.93399,-119.058 0/0:39:36,3:36:1406:3:120:0,-0.55286,-115.602 0/0:45:45,0:45:1804:0:0:0,-13.5463,-162.57 0/0:53:53,0:53:2119:0:0:0,-15.9546,-190.883 dDocent_Contig_8687 14 . C A 12775.3 . AB=0.522262;ABP=6.58761;AC=6;AF=0.5;AN=12;AO=434;CIGAR=1X;DP=831;DPB=831;DPRA=0;EPP=945.429;EPPR=862.913;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=17093;QR=15614;RO=396;RPL=0;RPP=945.429;RPPR=862.913;RPR=434;RUN=1;SAF=434;SAP=945.429;SAR=0;SRF=396;SRP=862.913;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:88:49,39:49:1937:39:1479:-106.861,0,-148.045 0/1:73:37,36:37:1476:36:1433:-107.249,0,-111.117 0/1:174:106,67:106:4184:67:2647:-185.879,0,-324.046 0/1:68:32,36:32:1213:36:1391:-104.966,0,-88.9684 0/1:192:139,53:139:5479:53:2132:-134.26,0,-435.152 0/1:236:33,203:33:1325:203:8011:-649.534,0,-48.4685 dDocent_Contig_8688 9 . G A 600.99 . AB=0.162264;ABP=265.562;AC=3;AF=0.25;AN=12;AO=55;CIGAR=1X;DP=513;DPB=513;DPRA=0;EPP=122.441;EPPR=997.545;GTI=0;LEN=1;MEANALT=1;MQM=55.8727;MQMR=59.9541;NS=6;NUMALT=1;ODDS=0;PAIRED=0.727273;PAIREDR=0.949782;PAO=0;PQA=0;PQR=0;PRO=0;QA=2092;QR=17178;RO=458;RPL=0;RPP=122.441;RPPR=997.545;RPR=55;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=458;SRP=997.545;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:90:87,3:87:3275:3:115:0,-16.3678,-284.176 0/1:126:107,19:107:4013:19:715:-25.5487,0,-323.349 0/1:58:48,10:48:1800:10:388:-16.2057,0,-144.796 0/0:115:107,8:107:3993:8:307:0,-7.55354,-332.396 0/0:43:42,1:42:1591:1:38:0,-9.14702,-139.658 0/1:81:67,14:67:2506:14:529:-23.5666,0,-201.359 dDocent_Contig_8690 23 . G A 118.718 . AB=0.2;ABP=30.3709;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=186;DPB=186;DPRA=1.15894;EPP=18.2106;EPPR=391.704;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.714286;PAIREDR=0.469274;PAO=0;PQA=0;PQR=0;PRO=0;QA=262;QR=7143;RO=179;RPL=0;RPP=18.2106;RPPR=391.704;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=179;SRP=391.704;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1201:0:0:0,-9.0309,-108.366 0/0:48:48,0:48:1934:0:0:0,-14.4494,-174.257 0/0:18:18,0:18:704:0:0:0,-5.41854,-63.6885 0/0:30:30,0:30:1197:0:0:0,-9.0309,-108.008 0/1:35:28,7:28:1109:7:262:-13.3947,0,-89.5574 0/0:25:25,0:25:998:0:0:0,-7.52575,-90.1143 dDocent_Contig_8691 50 . A T 312.806 . AB=0.211765;ABP=64.348;AC=2;AF=0.166667;AN=12;AO=18;CIGAR=1X;DP=293;DPB=293;DPRA=0.817308;EPP=42.0968;EPPR=595.822;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.444444;PAIREDR=0.600733;PAO=0;PQA=0;PQR=0;PRO=0;QA=660;QR=10171;RO=273;RPL=7;RPP=4.9405;RPPR=4.79998;RPR=11;RUN=1;SAF=7;SAP=4.9405;SAR=11;SRF=144;SRP=4.79998;SRR=129;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1308:0:0:0,-10.536,-117.997 0/0:84:82,0:82:2998:0:0:0,-24.6845,-269.628 0/0:58:58,0:58:2169:0:0:0,-17.4597,-195.414 0/0:31:31,0:31:1165:0:0:0,-9.33193,-105.133 0/1:36:24,12:24:919:12:442:-29.2821,0,-72.1795 0/1:49:43,6:43:1612:6:218:-5.22038,0,-130.59 dDocent_Contig_8692 40 . G A 144.691 . AB=0.12;ABP=97.0785;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=2X;DP=168;DPB=168;DPRA=0;EPP=35.5824;EPPR=315.702;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.888889;PAO=0;PQA=0;PQR=0;PRO=0;QA=604;QR=5663;RO=144;RPL=0;RPP=35.5824;RPPR=315.702;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=144;SRP=315.702;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:26:24,2,0,0:24:951:2,0,0:81,0,0:0,-0.141046,-78.2094,-7.22472,-78.8115,-85.4913,-7.22472,-78.8115,-85.4913,-85.4913 0|0:45:39,3,0,2:39:1539:3,0,2:117,0,78:0,-2.09365,-127.86,-11.7402,-128.763,-138.379,-5.3141,-122.352,-131.968,-131.366 0|1:21:19,2,0,0:19:758:2,0,0:82,0,0:-1.45805,0,-62.2177,-7.17762,-62.8197,-69.589,-7.17762,-62.8197,-69.589,-69.589 0|0:22:21,1,0,0:21:787:1,0,0:39,0,0:0,-2.7261,-67.2415,-6.32163,-67.5425,-70.7491,-6.32163,-67.5425,-70.7491,-70.7491 0|0:17:13,1,3,0:13:523:1,3,0:41,120,0:-5.96385,-6.49068,-49.2938,0,-39.7106,-42.1921,-9.87724,-49.5948,-43.0952,-52.9794 0|1:37:28,6,0,3:28:1105:6,0,3:244,0,118:-11.7062,0,-89.1095,-20.1351,-90.9157,-111.044,-10.433,-81.2094,-101.338,-100.435 dDocent_Contig_8693 39 . A G 49.4867 . AB=0.148148;ABP=32.0437;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=223;DPB=223;DPRA=0.688776;EPP=11.6962;EPPR=478.563;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0.73516;PAO=0;PQA=0;PQR=0;PRO=0;QA=158;QR=8690;RO=219;RPL=0;RPP=11.6962;RPPR=478.563;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=219;SRP=478.563;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:47:47,0:47:1873:0:0:0,-14.1484,-168.777 0/0:46:46,0:46:1825:0:0:0,-13.8474,-164.469 0/0:41:41,0:41:1624:0:0:0,-12.3422,-146.39 0/0:33:33,0:33:1314:0:0:0,-9.93399,-118.521 0/1:27:23,4:23:908:4:158:-6.47155,0,-73.9009 0/0:29:29,0:29:1146:0:0:0,-8.72987,-103.421 dDocent_Contig_8694 9 . G A 18568.7 . AB=0.0332481;ABP=1482.78;AC=6;AF=0.5;AN=12;AO=26;CIGAR=1X5M1X;DP=1225;DPB=1225;DPRA=0;EPP=59.4686;EPPR=802.112;GTI=0;LEN=1;MEANALT=5.25;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.383152;PAO=0;PQA=0;PQR=0;PRO=0;QA=996;QR=14449;RO=368;RPL=0;RPP=59.4686;RPPR=802.112;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=368;SRP=802.112;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:157:39,78,7,11,22:39:1534:78,7,11,22:3031,269,428,874:-237.273,0,-102.704,-226.93,-104.102,-351.008,-213.84,-91.0117,-317.942,-336.714,-177.107,-54.2779,-281.209,-268.119,-296.669 0|1:246:70,115,2,34,22:70:2749:115,2,34,22:4490,78,1325,869:-348.023,0,-191.482,-362.684,-219.688,-588.179,-260.229,-117.234,-479.915,-476.092,-297.984,-154.989,-517.67,-415.216,-517.459 0|1:227:71,119,5,4,26:71:2792:119,5,4,26:4655,192,160,1027:-361.317,0,-193.837,-366.929,-213.899,-595.084,-369.511,-216.48,-583.41,-597.967,-298.289,-145.259,-512.189,-514.77,-520.123 0|1:199:61,90,0,21,25:61:2392:90,0,21,25:3555,0,809,998:-274.166,0,-169.613,-292.529,-196.706,-489.234,-226.14,-130.317,-422.845,-416.523,-210.336,-114.512,-407.042,-340.653,-399.516 0|1:244:73,149,0,4,17:73:2852:149,0,4,17:5786,0,160,686:-453.434,0,-189.601,-475.409,-234.455,-709.863,-462.244,-221.29,-696.699,-695.495,-418.859,-177.904,-653.314,-640.149,-648.196 0|1:152:54,65,12,9,12:54:2130:65,12,9,12:2555,457,351,480:-193.879,0,-155.687,-172.65,-137.77,-344.29,-181.286,-146.405,-319.053,-353.829,-170.596,-135.716,-308.364,-317,-342.237 dDocent_Contig_8695 16 . A G 206.099 . AB=0.180328;ABP=57.1547;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=454;DPB=454;DPRA=0.776081;EPP=26.8965;EPPR=964.973;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.781038;PAO=0;PQA=0;PQR=0;PRO=0;QA=446;QR=17591;RO=443;RPL=0;RPP=26.8965;RPPR=964.973;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=443;SRP=964.973;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:66:66,0:66:2634:0:0:0,-19.868,-237.19 0/0:90:90,0:90:3563:0:0:0,-27.0927,-320.708 0/0:92:92,0:92:3676:0:0:0,-27.6948,-330.863 0/0:67:67,0:67:2651:0:0:0,-20.169,-238.724 0/1:61:50,11:50:1993:11:446:-22.1328,0,-161.207 0/0:78:78,0:78:3074:0:0:0,-23.4803,-276.746 dDocent_Contig_8696 15 . C A 1449.58 . AB=0.369128;ABP=25.1768;AC=4;AF=0.333333;AN=12;AO=63;CIGAR=1X;DP=394;DPB=394;DPRA=0.425397;EPP=139.813;EPPR=717.425;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.968254;PAIREDR=0.969605;PAO=0;PQA=0;PQR=0;PRO=0;QA=2500;QR=13074;RO=329;RPL=0;RPP=139.813;RPPR=717.425;RPR=63;RUN=1;SAF=63;SAP=139.813;SAR=0;SRF=329;SRP=717.425;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:39:27,12:27:1085:12:480:-31.8116,0,-86.1982 0/1:49:35,14:35:1410:14:543:-34.461,0,-112.402 0/1:19:4,15:4:164:15:591:-47.807,0,-9.43033 0/1:42:28,14:28:1114:14:560:-38.0998,0,-87.9031 0/0:126:125,0:125:4952:0:0:0,-37.6287,-445.167 0/0:119:110,8:110:4349:8:326:0,-6.22085,-361.67 dDocent_Contig_8697 29 . G C 539.84 . AB=0.08;ABP=41.3151;AC=0;AF=0;AN=12;AO=5;CIGAR=11M1X;DP=218;DPB=206.917;DPRA=1.36;EPP=13.8677;EPPR=372.161;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0.2;PAIREDR=0.623529;PAO=0;PQA=0;PQR=0;PRO=0;QA=202;QR=6604;RO=170;RPL=0;RPP=13.8677;RPPR=372.161;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=170;SRP=372.161;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:25:11,2,0,9,2:11:427:2,0,9,2:80,0,335,82:-24.0882,-20.8067,-55.2915,-27.3995,-55.8936,-62.485,0,-28.4806,-35.0716,-32.3623,-20.6271,-49.1231,-55.7147,-28.3011,-55.1127 0|0:40:30,0,0,8,0:30:1171:0,0,8,0:0,0,255,0:-11.5554,-20.5863,-116.912,-20.5863,-116.912,-116.912,0,-96.3937,-96.3937,-93.9854,-20.5863,-116.912,-116.912,-96.3937,-116.912 0|0:43:39,0,0,0,3:39:1488:0,0,0,3:0,0,0,120:0,-11.7402,-133.858,-11.7402,-133.858,-133.858,-11.7402,-133.858,-133.858,-133.858,-1.63046,-123.972,-123.972,-123.972,-123.068 0|0:42:38,4,0,0,0:38:1485:4,0,0,0:147,0,0,0:-0.941463,0,-121.27,-12.3806,-122.475,-134.486,-12.3806,-122.475,-134.486,-134.486,-12.3806,-122.475,-134.486,-134.486,-134.486 0|0:25:23,0,0,2,0:23:912:0,0,2,0:0,0,74,0:0,-6.92369,-82.0212,-6.92369,-82.0212,-82.0212,-0.499983,-75.9693,-75.9693,-75.3673,-6.92369,-82.0212,-82.0212,-75.9693,-82.0212 0|0:43:29,0,3,11,0:29:1121:0,3,11,0:0,116,396,0:-23.5558,-32.2857,-124.367,-22.752,-114.838,-113.935,0,-92.0668,-82.5388,-88.7555,-32.2857,-124.367,-114.838,-92.0668,-124.367 dDocent_Contig_8698 16 . C T 76.0437 . AB=0.0909091;ABP=34.9902;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=2X;DP=117;DPB=117;DPRA=0.916667;EPP=7.35324;EPPR=226.672;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=57.6214;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.679612;PAO=0;PQA=0;PQR=0;PRO=0;QA=78;QR=4124;RO=103;RPL=0;RPP=7.35324;RPPR=226.672;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=103;SRP=226.672;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:15:15,0,0:15:605:0,0:0,0:0,-4.51545,-52.3441,-4.51545,-52.3441,-52.3441 0|1:22:20,2,0:20:807:2,0:78,0:-0.299587,0,-66.3244,-6.32019,-66.9265,-72.8788 0|0:10:9,0,1:9:357:0,1:0,40:-0.985379,-3.69465,-33.0747,0,-29.7793,-29.4783 0|0:33:30,0,3:30:1198:0,3:0,104:0,-9.0309,-107.81,-2.14104,-101.21,-100.307 0|0:17:12,0,5:12:482:0,5:0,204:-8.5224,-12.1348,-51.0793,0,-39.2695,-37.7644 0|0:20:17,0,3:17:675:0,3:0,120:-2.25792,-7.37543,-61.4024,0,-54.3362,-53.4331 dDocent_Contig_8700 19 . C T 30.4259 . AB=0.136364;ABP=28.2783;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=111;DPB=111;DPRA=1.23596;EPP=9.52472;EPPR=237.529;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=120;QR=4154;RO=108;RPL=0;RPP=9.52472;RPPR=237.529;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=108;SRP=237.529;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:386:0:0:0,-3.0103,-35.0933 0/1:22:19,3:19:745:3:120:-4.56503,0,-60.7541 0/0:41:41,0:41:1584:0:0:0,-12.3422,-142.808 0/0:4:4,0:4:153:0:0:0,-1.20412,-14.1395 0/0:12:12,0:12:460:0:0:0,-3.61236,-41.7473 0/0:22:22,0:22:826:0:0:0,-6.62266,-74.6481 dDocent_Contig_8701 14 . A T 684.268 . AB=0.158784;ABP=302.351;AC=4;AF=0.333333;AN=12;AO=53;CIGAR=1X;DP=421;DPB=421;DPRA=0;EPP=118.098;EPPR=802.112;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.991848;PAO=0;PQA=0;PQR=0;PRO=0;QA=2051;QR=14619;RO=368;RPL=0;RPP=118.098;RPPR=802.112;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=368;SRP=802.112;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:101:80,21:80:3163:21:804:-42.2742,0,-254.332 0/0:82:77,5:77:3062:5:195:0,-6.76043,-257.744 0/0:43:42,1:42:1638:1:41:0,-8.84972,-143.568 0/1:85:77,8:77:3091:8:316:-3.21881,0,-252.676 0/1:47:38,9:38:1515:9:342:-16.9861,0,-122.446 0/1:63:54,9:54:2150:9:353:-13.1652,0,-174.72 dDocent_Contig_8702 71 . C A 45.3935 . AB=0.112676;ABP=95.5273;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=147;DPB=147;DPRA=1.86842;EPP=20.3821;EPPR=304.845;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=310;QR=5398;RO=139;RPL=8;RPP=20.3821;RPPR=304.845;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=139;SRP=304.845;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:38,0:38:1441:0:0:0,-11.4391,-129.965 0/0:23:23,0:23:865:0:0:0,-6.92369,-78.1668 0/1:37:32,5:32:1270:5:187:-6.05001,0,-103.432 0/1:34:31,3:31:1230:3:123:-1.22977,0,-100.742 0/0:12:12,0:12:471:0:0:0,-3.61236,-42.7398 0/0:3:3,0:3:121:0:0:0,-0.90309,-11.2802 dDocent_Contig_8703 12 . T A 36.6447 . AB=0.119048;ABP=55.9529;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=189;DPB=189;DPRA=1.42857;EPP=13.8677;EPPR=402.561;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.4;PAIREDR=0.75;PAO=0;PQA=0;PQR=0;PRO=0;QA=194;QR=7296;RO=184;RPL=0;RPP=13.8677;RPPR=402.561;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=184;SRP=402.561;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:875:0:0:0,-6.62266,-79.0555 0/0:32:32,0:32:1230:0:0:0,-9.63296,-110.967 0/0:42:42,0:42:1664:0:0:0,-12.6433,-149.98 0/0:22:22,0:22:866:0:0:0,-6.62266,-78.2492 0/1:42:37,5:37:1504:5:194:-5.18725,0,-122.954 0/0:29:29,0:29:1157:0:0:0,-8.72987,-104.406 dDocent_Contig_8704 138 . G C 154.174 . AB=0.139785;ABP=107.825;AC=4;AF=0.333333;AN=12;AO=13;CIGAR=1X;DP=127;DPB=127;DPRA=1.36765;EPP=31.2394;EPPR=250.558;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.923077;PAIREDR=0.824561;PAO=0;PQA=0;PQR=0;PRO=0;QA=516;QR=4578;RO=114;RPL=13;RPP=31.2394;RPPR=250.558;RPR=0;RUN=1;SAF=0;SAP=31.2394;SAR=13;SRF=0;SRP=250.558;SRR=114;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:28,7:28:1134:7:279:-14.9451,0,-91.8043 0/1:32:29,3:29:1169:3:117:-1.27633,0,-95.8534 0/1:13:12,1:12:474:1:40:-0.0822893,0,-39.0939 0/1:13:11,2:11:436:2:80:-3.6784,0,-35.679 0/0:16:16,0:16:648:0:0:0,-4.81648,-58.6537 0/0:18:18,0:18:717:0:0:0,-5.41854,-64.857 dDocent_Contig_8705 9 . G A 4538.7 . AB=0.490683;ABP=3.25307;AC=5;AF=0.416667;AN=12;AO=161;CIGAR=1X2M1X1M;DP=361;DPB=361;DPRA=0;EPP=352.617;EPPR=417.762;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.680628;PAO=0;PQA=0;PQR=0;PRO=0;QA=6318;QR=7504;RO=191;RPL=0;RPP=352.617;RPPR=417.762;RPR=161;RUN=1;SAF=161;SAP=352.617;SAR=0;SRF=191;SRP=417.762;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:48:38,8,0:38:1490:8,0:306,0:-13.6633,0,-120.123,-25.1025,-122.532,-147.638 0|1:31:27,4,0:27:1070:4,0:159,0:-5.3604,0,-87.2662,-13.4882,-88.4703,-101.562 0|0:39:33,3,3:33:1310:3,3:118,120:0,-0.230446,-107.169,-0.0460234,-98.1877,-106.991 0|1:49:32,17,0:32:1246:17,0:676,0:-46.4237,0,-97.6717,-56.0566,-102.789,-158.452 0|1:106:19,86,0:19:739:86,0:3355,0:-270.037,0,-34.8205,-275.756,-60.7091,-336.485 0|1:88:42,43,0:42:1649:43,0:1704,0:-127.607,0,-122.662,-140.25,-135.606,-275.867 dDocent_Contig_8706 55 . A C 1154.05 . AB=0.166253;ABP=392.911;AC=3;AF=0.25;AN=12;AO=74;CIGAR=1X;DP=698;DPB=698;DPRA=0.953719;EPP=163.699;EPPR=1358.01;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990385;PAO=0;PQA=0;PQR=0;PRO=0;QA=2940;QR=24854;RO=624;RPL=74;RPP=163.699;RPPR=1358.01;RPR=0;RUN=1;SAF=74;SAP=163.699;SAR=0;SRF=624;SRP=1358.01;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:65:61,4:61:2431:4:161:0,-4.69167,-204.07 0/0:109:106,3:106:4207:3:101:0,-23.3958,-369.178 0/1:94:80,14:80:3199:14:559:-22.3551,0,-259.684 0/0:121:121,0:121:4775:0:0:0,-36.4246,-429.672 0/1:195:159,36:159:6341:36:1443:-71.4186,0,-511.736 0/1:114:97,17:97:3901:17:676:-26.8529,0,-316.762 dDocent_Contig_8707 82 . T A 178.736 . AB=0.164179;ABP=68.6406;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=167;DPB=167;DPRA=1.34;EPP=26.8965;EPPR=341.76;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.636364;PAIREDR=0.923077;PAO=0;PQA=0;PQR=0;PRO=0;QA=450;QR=6120;RO=156;RPL=11;RPP=26.8965;RPPR=341.76;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=156;SRP=341.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:34,0:34:1311:0:0:0,-10.235,-118.278 0/0:37:37,0:37:1407:0:0:0,-11.1381,-126.908 0/1:28:22,6:22:887:6:245:-14.0006,0,-71.7083 0/0:12:12,0:12:484:0:0:0,-3.61236,-43.9118 0/0:17:17,0:17:650:0:0:0,-5.11751,-58.8335 0/1:39:34,5:34:1381:5:205:-7.09484,0,-112.801 dDocent_Contig_8710 13 . T C 3042.59 . AB=0.488263;ABP=3.26517;AC=6;AF=0.5;AN=12;AO=104;CIGAR=1X;DP=213;DPB=213;DPRA=0;EPP=228.843;EPPR=239.701;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.798077;PAIREDR=0.678899;PAO=0;PQA=0;PQR=0;PRO=0;QA=4196;QR=4389;RO=109;RPL=0;RPP=228.843;RPPR=239.701;RPR=104;RUN=1;SAF=104;SAP=228.843;SAR=0;SRF=109;SRP=239.701;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:48:17,31:17:660:31:1238:-97.2358,0,-45.2775 0/1:33:21,12:21:849:12:485:-34.0667,0,-66.785 0/1:20:6,14:6:243:14:569:-45.5313,0,-16.227 0/1:50:31,19:31:1254:19:772:-54.7471,0,-98.0766 0/1:20:16,4:16:652:4:163:-9.03783,0,-52.9919 0/1:42:18,24:18:731:24:969:-74.8625,0,-53.4708 dDocent_Contig_8711 49 . C T 814.117 . AB=0.329897;ABP=27.389;AC=3;AF=0.25;AN=12;AO=35;CIGAR=1X;DP=196;DPB=196;DPRA=1.97778;EPP=79.0118;EPPR=343.985;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.971429;PAIREDR=0.993789;PAO=0;PQA=0;PQR=0;PRO=0;QA=1398;QR=6360;RO=161;RPL=0;RPP=79.0118;RPPR=343.985;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=161;SRP=352.617;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:42:40,2:40:1568:2:81:0,-4.95753,-133.669 0/1:65:43,22:43:1688:22:886:-60.4804,0,-132.571 0/1:26:18,8:18:721:8:326:-21.8831,0,-57.3852 0/0:39:38,1:38:1500:1:41:0,-7.6456,-131.152 0/0:18:18,0:18:719:0:0:0,-5.41854,-65.0363 0/1:6:4,2:4:164:2:64:-4.26961,0,-13.3437 dDocent_Contig_8712 12 . G A 81.5587 . AB=0.11215;ABP=142.817;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=328;DPB=328;DPRA=0.968326;EPP=29.068;EPPR=689.196;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0833333;PAIREDR=0.759494;PAO=0;PQA=0;PQR=0;PRO=0;QA=476;QR=12537;RO=316;RPL=0;RPP=29.068;RPPR=689.196;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=316;SRP=689.196;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:979:0:0:0,-7.52575,-88.4107 0/0:62:62,0:62:2485:0:0:0,-18.6639,-223.79 0/0:79:79,0:79:3162:0:0:0,-23.7814,-284.656 0/0:55:55,0:55:2159:0:0:0,-16.5566,-194.495 0/1:50:45,5:45:1754:5:200:-3.32804,0,-143.036 0/1:57:50,7:50:1998:7:276:-8.04629,0,-162.856 dDocent_Contig_8713 9 . C G 534.851 . AB=0.355932;ABP=13.6468;AC=1;AF=0.0833333;AN=12;AO=28;CIGAR=1X;DP=367;DPB=367;DPRA=0.929231;EPP=63.8115;EPPR=739.139;GTI=0;LEN=1;MEANALT=1;MQM=53.8214;MQMR=57.4631;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0357143;PAIREDR=0.59587;PAO=0;PQA=0;PQR=0;PRO=0;QA=1049;QR=12986;RO=339;RPL=0;RPP=63.8115;RPPR=739.139;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=339;SRP=739.139;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:64:63,1:63:2427:1:39:0,-15.3694,-213.579 0/0:55:52,3:52:2001:3:117:0,-8.98376,-171.979 0/0:67:65,2:65:2455:2:49:0,-16.6792,-212.243 0/1:59:38,21:38:1453:21:805:-55.008,0,-111.453 0/0:65:65,0:65:2488:0:0:0,-19.5669,-222.092 0/0:57:56,1:56:2162:1:39:0,-14.4852,-189.615 dDocent_Contig_8714 27 . A T 120.127 . AB=0.294118;ABP=9.26925;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=159;DPB=159;DPRA=0.864865;EPP=16.0391;EPPR=335.246;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.777778;PAO=0;PQA=0;PQR=0;PRO=0;QA=243;QR=6079;RO=153;RPL=0;RPP=16.0391;RPPR=335.246;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=153;SRP=335.246;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1108:0:0:0,-8.42884,-100.004 0/0:16:16,0:16:643:0:0:0,-4.81648,-58.2015 0/0:27:27,0:27:1074:0:0:0,-8.12781,-96.9495 0/0:40:40,0:40:1583:0:0:0,-12.0412,-142.702 0/0:31:30,1:30:1194:1:40:0,-5.33625,-103.741 0/1:17:12,5:12:477:5:203:-13.5355,0,-38.1624 dDocent_Contig_8716 107 . N A 127.607 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=7.37776;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=138;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:138:-12.7604,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_8717 23 . A T 38.2742 . AB=0.166667;ABP=20.3821;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X1M2X;DP=415;DPB=415;DPRA=1.875;EPP=12.7819;EPPR=867.256;GTI=0;LEN=1;MEANALT=1.6;MQM=51.125;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.994975;PAO=0;PQA=0;PQR=0;PRO=0;QA=312;QR=15743;RO=398;RPL=0;RPP=20.3821;RPPR=867.256;RPR=8;RUN=1;SAF=7;SAP=12.7819;SAR=1;SRF=398;SRP=867.256;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:40:40,0:40:1590:0:0:0,-12.0412,-143.341 0|0:58:56,2:56:2199:2:79:0,-9.96211,-190.592 0|1:5:3,2:3:120:2:73:-5.34942,0,-9.68254 0|1:13:12,1:12:485:1:40:-0.0534178,0,-40.0881 0|0:190:180,2:180:7138:2:80:0,-48.97,-635.889 0|0:109:107,1:107:4211:1:40:0,-28.9201,-374.982 dDocent_Contig_8718 18 . T C 2370.18 . AB=0.285714;ABP=137.021;AC=1;AF=0.0833333;AN=12;AO=114;CIGAR=1X;DP=1345;DPB=1345;DPRA=2.35981;EPP=250.558;EPPR=2673.92;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4473;QR=46658;RO=1230;RPL=0;RPP=250.558;RPPR=2673.92;RPR=114;RUN=1;SAF=114;SAP=250.558;SAR=0;SRF=1230;SRP=2673.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:123:123,0:123:4559:0:0:0,-37.0267,-410.341 0/0:191:191,0:191:7310:0:0:0,-57.4967,-657.699 0/0:161:160,0:160:6203:0:0:0,-48.1648,-558.006 0/0:142:142,0:142:5386:0:0:0,-42.7463,-484.69 0/1:336:240,96:240:9026:96:3774:-238.541,0,-710.89 0/0:392:374,18:374:14174:18:699:0,-54.7711,-1211.73 dDocent_Contig_8719 37 . T A 8135.45 . AB=0.432836;ABP=16.1364;AC=7;AF=0.583333;AN=12;AO=266;CIGAR=1X;DP=456;DPB=456;DPRA=0;EPP=580.622;EPPR=415.59;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10246;QR=7493;RO=190;RPL=0;RPP=580.622;RPPR=415.59;RPR=266;RUN=1;SAF=266;SAP=580.622;SAR=0;SRF=190;SRP=415.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:77:57,20:57:2238:20:791:-48.3326,0,-178.42 0/1:69:41,28:41:1591:28:1065:-75.379,0,-122.656 0/1:82:62,20:62:2481:20:746:-42.7778,0,-198.748 0/1:41:7,34:7:272:34:1319:-106.64,0,-12.5005 0/1:66:23,43:23:911:43:1653:-129.154,0,-62.4266 1/1:121:0,121:0:0:121:4672:-420.483,-36.4246,0 dDocent_Contig_8720 19 . C T 455.24 . AB=0.234043;ABP=60.7622;AC=3;AF=0.25;AN=12;AO=24;CIGAR=1X;DP=157;DPB=157;DPRA=1.87879;EPP=55.1256;EPPR=291.816;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.774436;PAO=0;PQA=0;PQR=0;PRO=0;QA=948;QR=5308;RO=133;RPL=0;RPP=55.1256;RPPR=291.816;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=133;SRP=291.816;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:21,5:21:824:5:201:-10.6437,0,-66.647 0/1:34:23,11:23:923:11:428:-28.634,0,-73.1389 0/1:34:28,6:28:1127:6:237:-11.4681,0,-91.4788 0/0:21:21,0:21:839:0:0:0,-6.32163,-75.8222 0/0:12:12,0:12:488:0:0:0,-3.61236,-44.2713 0/0:30:28,2:28:1107:2:82:0,-1.25122,-92.1289 dDocent_Contig_8721 37 . A G 495.401 . AB=0.261364;ABP=46.5385;AC=2;AF=0.166667;AN=12;AO=27;CIGAR=1X;DP=226;DPB=226;DPRA=1.40426;EPP=5.02092;EPPR=21.3532;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.777778;PAIREDR=0.592965;PAO=0;PQA=0;PQR=0;PRO=0;QA=1011;QR=7284;RO=199;RPL=0;RPP=61.6401;RPPR=435.133;RPR=27;RUN=1;SAF=16;SAP=5.02092;SAR=11;SRF=79;SRP=21.3532;SRR=120;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:528:0:0:0,-4.51545,-47.8345 0/0:46:46,0:46:1700:0:0:0,-13.8474,-153.259 0/0:33:33,0:33:1169:0:0:0,-9.93399,-105.505 0/1:48:37,11:37:1378:11:424:-24.0511,0,-109.847 0/1:40:28,12:28:1037:12:449:-28.7106,0,-81.59 0/0:44:40,4:40:1472:4:138:0,-0.48487,-119.989 dDocent_Contig_8722 68 . T C 922.39 . AB=0.221344;ABP=173.647;AC=6;AF=0.5;AN=12;AO=56;CIGAR=1X;DP=253;DPB=253;DPRA=0;EPP=124.613;EPPR=428.619;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.482143;PAIREDR=0.505102;PAO=0;PQA=0;PQR=0;PRO=0;QA=1971;QR=6914;RO=196;RPL=31;RPP=4.40625;RPPR=17.3686;RPR=25;RUN=1;SAF=31;SAP=4.40625;SAR=25;SRF=116;SRP=17.3686;SRR=80;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:65:40,24:40:1410:24:863:-58.6343,0,-107.841 0/1:55:46,9:46:1557:9:325:-13.0396,0,-123.856 0/1:37:32,5:32:1189:5:171:-4.58812,0,-96.1674 0/1:27:18,9:18:653:9:286:-17.9203,0,-50.97 0/1:30:26,4:26:922:4:145:-4.37472,0,-74.2657 0/1:39:34,5:34:1183:5:181:-4.90332,0,-95.0303 dDocent_Contig_8723 12 . T C 4141.08 . AB=0.0625;ABP=162.614;AC=0;AF=0;AN=12;AO=6;CIGAR=2M1X6M1X3M1X2M1X;DP=413;DPB=414;DPRA=0;EPP=16.0391;EPPR=422.104;GTI=0;LEN=1;MEANALT=6;MQM=60;MQMR=60;NS=6;NUMALT=6;ODDS=0;PAIRED=0.666667;PAIREDR=0.984456;PAO=0;PQA=0;PQR=0;PRO=0;QA=231;QR=7543;RO=193;RPL=0;RPP=16.0391;RPPR=422.104;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=193;SRP=422.104;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:48:24,0,0,0,0,5,17:24:943:0,0,0,0,5,17:0,0,0,0,199,686:-49.3604,-56.5851,-134.149,-56.5851,-134.149,-134.149,-56.5851,-134.149,-134.149,-134.149,-56.5851,-134.149,-134.149,-134.149,-134.149,-40.1967,-117.762,-117.762,-117.762,-117.762,-116.257,0,-77.5937,-77.5937,-77.5937,-77.5937,-61.2051,-72.4762 0|0:78:35,5,0,0,0,0,35:35:1347:5,0,0,0,0,35:201,0,0,0,0,1396:-104.435,-98.4058,-207.481,-114.971,-208.986,-225.551,-114.971,-208.986,-225.551,-225.551,-114.971,-208.986,-225.551,-225.551,-225.551,-114.971,-208.986,-225.551,-225.551,-225.551,-225.551,0,-94.0228,-110.59,-110.59,-110.59,-110.59,-100.054 0|0:45:20,2,0,0,0,4,18:20:795:2,0,0,0,4,18:80,0,0,0,163,731:-54.3034,-53.7333,-118.589,-60.324,-119.191,-125.782,-60.324,-119.191,-125.782,-125.782,-60.324,-119.191,-125.782,-125.782,-125.782,-46.8739,-105.743,-112.333,-112.333,-112.333,-111.129,0,-58.8933,-65.4844,-65.4844,-65.4844,-52.0337,-60.0659 0|0:67:15,8,0,6,0,5,31:15:587:8,0,6,0,5,31:316,0,235,0,167,1257:-99.1673,-77.6797,-123.538,-103.683,-125.946,-151.949,-84.358,-106.621,-132.624,-130.818,-103.683,-125.946,-151.949,-132.624,-151.949,-90.1703,-112.433,-138.435,-119.111,-138.435,-136.93,0,-22.2692,-48.2766,-28.9491,-48.2766,-34.7651,-38.9447 0|0:79:47,0,0,0,24,0,7:47:1847:0,0,0,24,0,7:0,0,0,929,0,287:-62.1445,-76.2929,-228.215,-76.2929,-228.215,-228.215,-76.2929,-228.215,-228.215,-228.215,0,-151.908,-151.908,-151.908,-144.683,-76.2929,-228.215,-228.215,-228.215,-151.908,-228.215,-52.5996,-204.525,-204.525,-204.525,-128.217,-204.525,-202.418 0|0:96:52,0,6,3,23,0,10:52:2024:0,6,3,23,0,10:0,231,115,873,0,403:-55.919,-71.5726,-237.914,-52.6064,-218.948,-217.142,-62.1339,-228.475,-209.509,-227.572,0,-166.338,-147.372,-156.899,-159.414,-71.5726,-237.914,-218.948,-228.475,-166.338,-237.914,-38.3506,-204.695,-185.729,-195.257,-133.119,-204.695,-201.685 dDocent_Contig_8724 103 . N A 2855.96 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=94;CIGAR=4X;DP=94;DPB=94;DPRA=0;EPP=207.129;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3147;QR=0;RO=0;RPL=0;RPP=207.129;RPPR=0;RPR=94;RUN=1;SAF=0;SAP=207.129;SAR=94;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:16:0,16:0:0:16:529:-47.9262,-4.81648,0 1|1:24:0,24:0:0:24:810:-73.2134,-7.22472,0 1|1:42:0,42:0:0:42:1404:-126.654,-12.6433,0 1|1:11:0,11:0:0:11:370:-33.6255,-3.31133,0 .:.:.:.:.:.:.:. 1|1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 dDocent_Contig_8725 11 . T G 5713.46 . AB=0.352679;ABP=87.4651;AC=6;AF=0.5;AN=12;AO=219;CIGAR=1X1M;DP=661;DPB=661;DPRA=0;EPP=478.563;EPPR=912.857;GTI=0;LEN=1;MEANALT=1.66667;MQM=59.8493;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.876712;PAIREDR=0.99284;PAO=0;PQA=0;PQR=0;PRO=0;QA=8417;QR=16831;RO=419;RPL=0;RPP=478.563;RPPR=912.857;RPR=219;RUN=1;SAF=219;SAP=478.563;SAR=0;SRF=419;SRP=912.857;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:60:47,3,10:47:1875:3,10:108,349:-14.1865,-19.5212,-173.071,0,-145.639,-151.438 1|1:54:3,1,50:3:120:1,50:41,1997:-168.728,-166.247,-175.83,-5.17426,-11.6649,0 0|1:71:17,8,46:17:687:8,46:320,1819:-144.548,-123.306,-177.539,0,-30.2835,-42.7942 0|1:87:19,11,57:19:766:11,57:423,2178:-172.945,-143.939,-203.773,0,-28.4329,-45.9924 0|1:230:185,0,45:185:7450:0,45:0,1635:-78.1599,-133.85,-747.894,0,-614.414,-600.868 0|0:159:148,0,11:148:5933:0,11:0,439:0,-44.5524,-533.35,-8.00041,-497.197,-493.886 dDocent_Contig_8726 7 . C T 1675.14 . AB=0.455224;ABP=5.34382;AC=1;AF=0.0833333;AN=12;AO=61;CIGAR=1X;DP=762;DPB=762;DPRA=1.06688;EPP=135.47;EPPR=1525.21;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2324;QR=26849;RO=701;RPL=0;RPP=135.47;RPPR=1525.21;RPR=61;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=701;SRP=1525.21;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:175:175,0:175:6687:0:0:0,-52.6802,-601.732 0/0:176:176,0:176:6770:0:0:0,-52.9813,-609.183 0/0:65:65,0:65:2518:0:0:0,-19.5669,-226.815 0/0:185:185,0:185:7040:0:0:0,-55.6905,-633.472 0/0:27:27,0:27:1051:0:0:0,-8.12781,-94.8966 0/1:134:73,61:73:2783:61:2324:-169.037,0,-210.306 dDocent_Contig_8727 50 . T C 18666 . AB=0.258816;ABP=1521.81;AC=5;AF=0.416667;AN=12;AO=813;CIGAR=1X;DP=3621;DPB=3621;DPRA=0;EPP=898.418;EPPR=3764.23;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=32274;QR=110872;RO=2807;RPL=696;RPP=898.418;RPPR=3764.23;RPR=117;RUN=1;SAF=813;SAP=1768.42;SAR=0;SRF=2807;SRP=6098.33;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:569:454,115:454:17882:115:4534:-236.714,0,-1436.75 0/1:755:513,242:513:20300:242:9606:-636.688,0,-1598.09 0/1:593:397,196:397:15698:196:7801:-523.158,0,-1233.14 0/1:613:478,135:478:18881:135:5391:-300.508,0,-1513.3 0/0:615:579,35:579:22842:35:1364:0,-62.0886,-1930.92 0/1:476:386,90:386:15269:90:3578:-178.753,0,-1229.81 dDocent_Contig_8728 10 . C T 1344.93 . AB=0.15;ABP=45.5712;AC=0;AF=0;AN=12;AO=6;CIGAR=1X3M1D3M;DP=108;DPB=102.625;DPRA=0;EPP=16.0391;EPPR=94.2121;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=230;QR=1672;RO=42;RPL=0;RPP=16.0391;RPPR=94.2121;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=42;SRP=94.2121;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:14:7,0,4,3,0:7:281:0,4,3,0:0,157,122,0:-10.797,-12.9042,-36.0599,0,-23.1507,-21.9466,-2.8349,-25.9949,-13.0859,-25.0918,-12.9042,-36.0599,-23.1507,-25.9949,-36.0599 0|0:16:8,0,8,0,0:8:321:0,8,0,0:0,295,0,0:-22.0811,-24.4893,-50.955,0,-26.8502,-24.442,-24.4893,-50.955,-26.8502,-50.955,-24.4893,-50.955,-26.8502,-50.955,-50.955 0|0:9:6,0,3,0,0:6:240:0,3,0,0:0,119,0,0:-8.38574,-10.1919,-29.9646,0,-20.1701,-19.267,-10.1919,-29.9646,-20.1701,-29.9646,-10.1919,-29.9646,-20.1701,-29.9646,-29.9646 0|0:29:14,0,11,3,0:14:560:0,11,3,0:0,432,90,0:-31.4084,-35.6228,-81.7732,0,-46.2354,-42.9241,-28.4503,-74.5952,-39.0623,-73.6921,-35.6228,-81.7732,-46.2354,-74.5952,-81.7732 0|0:30:0,5,10,11,4:0:0:5,10,11,4:202,390,440,162:-68.295,-51.6404,-50.1353,-36.242,-19.5879,-33.2317,-32.0494,-15.3935,0,-28.7381,-54.9358,-38.2807,-22.8831,-18.6892,-53.7317 0|0:10:7,1,0,2,0:7:270:1,0,2,0:28,0,82,0:-4.74727,-4.67892,-26.5303,-6.85448,-26.8314,-29.039,0,-20.0578,-22.2634,-21.6613,-6.85448,-26.8314,-29.039,-22.2634,-29.039 dDocent_Contig_8729 9 . C T 2939.97 . AB=0.211781;ABP=517.467;AC=6;AF=0.5;AN=12;AO=151;CIGAR=1X;DP=713;DPB=713;DPRA=0;EPP=330.903;EPPR=1219.03;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994643;PAO=0;PQA=0;PQR=0;PRO=0;QA=5753;QR=21375;RO=560;RPL=0;RPP=330.903;RPPR=1219.03;RPR=151;RUN=1;SAF=151;SAP=330.903;SAR=0;SRF=560;SRP=1219.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:106:72,32:72:2743:32:1229:-79.2079,0,-215.356 0/1:105:84,21:84:3197:21:782:-39.0959,0,-256.271 0/1:60:44,16:44:1689:16:613:-37.447,0,-134.208 0/1:117:90,27:90:3432:27:1036:-58.3279,0,-273.789 0/1:196:158,38:158:6090:38:1460:-72.6758,0,-489.029 0/1:129:112,17:112:4224:17:633:-18.4645,0,-341.414 dDocent_Contig_8730 7 . C T 477.325 . AB=0.156379;ABP=252.229;AC=5;AF=0.416667;AN=12;AO=38;CIGAR=1X;DP=286;DPB=286;DPRA=1.13023;EPP=85.5263;EPPR=532.885;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995968;PAO=0;PQA=0;PQR=0;PRO=0;QA=1426;QR=9551;RO=248;RPL=0;RPP=85.5263;RPPR=541.535;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=247;SRP=532.885;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:43:43,0:43:1657:0:0:0,-12.9443,-149.394 0/1:62:54,8:54:2085:8:295:-8.23618,0,-169.217 0/1:51:43,8:43:1666:8:310:-12.9112,0,-134.848 0/1:53:43,10:43:1638:10:371:-17.7822,0,-131.727 0/1:53:45,8:45:1729:8:310:-12.3091,0,-139.911 0/1:24:20,4:20:776:4:140:-5.71567,0,-62.9435 dDocent_Contig_8732 15 . T G 4689.42 . AB=0.392694;ABP=46.8165;AC=6;AF=0.5;AN=12;AO=172;CIGAR=1X;DP=438;DPB=438;DPRA=0;EPP=376.504;EPPR=578.45;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992453;PAO=0;PQA=0;PQR=0;PRO=0;QA=6782;QR=10280;RO=265;RPL=0;RPP=376.504;RPPR=578.45;RPR=172;RUN=1;SAF=172;SAP=376.504;SAR=0;SRF=265;SRP=578.45;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:68:51,17:51:1969:17:680:-41.0612,0,-156.962 0/1:93:46,47:46:1825:47:1825:-136.467,0,-136.48 0/1:127:77,49:77:2980:49:1925:-135.157,0,-230.047 0/1:68:40,28:40:1533:28:1125:-81.0644,0,-117.751 0/1:42:28,14:28:1082:14:567:-38.7292,0,-85.0347 0/1:40:23,17:23:891:17:660:-47.6846,0,-68.4578 dDocent_Contig_8733 20 . C A 96.2036 . AB=0.162791;ABP=45.4803;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=2X;DP=165;DPB=165;DPRA=0.704918;EPP=10.7656;EPPR=346.103;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=278;QR=6329;RO=158;RPL=0;RPP=18.2106;RPPR=346.103;RPR=7;RUN=1;SAF=6;SAP=10.7656;SAR=1;SRF=158;SRP=346.103;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:47:47,0:47:1892:0:0:0,-14.1484,-170.479 0|1:38:34,4:34:1353:4:161:-3.43613,0,-110.595 0|0:26:26,0:26:1039:0:0:0,-7.82678,-93.8039 0|0:34:34,0:34:1367:0:0:0,-10.235,-123.286 0|1:5:2,3:2:81:3:117:-9.40343,0,-6.18058 0|0:15:15,0:15:597:0:0:0,-4.51545,-54.0646 dDocent_Contig_8734 19 . T C 4148 . AB=0.153483;ABP=1769.77;AC=6;AF=0.5;AN=12;AO=260;CIGAR=1X;DP=1694;DPB=1694;DPRA=0;EPP=567.593;EPPR=3116.9;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.969231;PAIREDR=0.976987;PAO=0;PQA=0;PQR=0;PRO=0;QA=10385;QR=56768;RO=1434;RPL=0;RPP=567.593;RPPR=3116.9;RPR=260;RUN=1;SAF=260;SAP=567.593;SAR=0;SRF=1434;SRP=3116.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:277:238,39:238:9319:39:1539:-55.3664,0,-754.813 0/1:360:321,39:321:12718:39:1571:-33.2541,0,-1035.36 0/1:235:182,53:182:7235:53:2135:-121.58,0,-580.054 0/1:264:230,34:230:9128:34:1331:-40.5791,0,-741.524 0/1:297:233,64:233:9318:64:2555:-140.684,0,-748.665 0/1:261:230,31:230:9050:31:1254:-34.558,0,-735.426 dDocent_Contig_8735 1 . N G 84.9196 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=91;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:91:-8.49142,-0.90309,0 dDocent_Contig_8736 37 . G T 638.39 . AB=0.121649;ABP=606.048;AC=3;AF=0.25;AN=12;AO=68;CIGAR=1X;DP=780;DPB=780;DPRA=1.92236;EPP=150.67;EPPR=1540.42;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.764;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.942416;PAO=0;PQA=0;PQR=0;PRO=0;QA=2741;QR=28217;RO=712;RPL=0;RPP=150.67;RPPR=1531.78;RPR=68;RUN=1;SAF=68;SAP=150.67;SAR=0;SRF=711;SRP=1540.42;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:128:111,17:111:4419:17:685:-23.4476,0,-359.124 0/1:262:233,29:233:9243:29:1174:-27.0661,0,-752.448 0/1:95:82,13:82:3228:13:520:-18.5471,0,-258.645 0/0:134:125,9:125:4976:9:362:0,-7.39563,-410.46 0/0:27:27,0:27:1065:0:0:0,-8.12781,-96.1414 0/0:134:134,0:134:5286:0:0:0,-40.338,-475.6 dDocent_Contig_8737 13 . C T 331.876 . AB=0.234375;ABP=42.2325;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=285;DPB=285;DPRA=1.06522;EPP=42.0968;EPPR=582.793;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=717;QR=10746;RO=267;RPL=0;RPP=42.0968;RPPR=582.793;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=267;SRP=582.793;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:45:44,1:44:1765:1:40:0,-9.55067,-155.067 0/1:64:49,15:49:1981:15:596:-34.7105,0,-159.212 0/0:38:36,2:36:1453:2:81:0,-3.75341,-123.33 0/0:39:39,0:39:1551:0:0:0,-11.7402,-139.828 0/0:51:51,0:51:2062:0:0:0,-15.3525,-185.759 0/0:48:48,0:48:1934:0:0:0,-14.4494,-174.256 dDocent_Contig_8738 20 . A G 349.627 . AB=0.139037;ABP=214.642;AC=2;AF=0.166667;AN=12;AO=37;CIGAR=1X;DP=633;DPB=633;DPRA=1.04854;EPP=83.3548;EPPR=1297.21;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.810811;PAIREDR=0.978188;PAO=0;PQA=0;PQR=0;PRO=0;QA=1482;QR=23478;RO=596;RPL=0;RPP=83.3548;RPPR=1297.21;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=596;SRP=1297.21;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:99:99,0:99:3904:0:0:0,-29.802,-351.377 0/0:137:126,11:126:4965:11:440:0,-1.28568,-406.797 0/1:73:66,7:66:2586:7:285:-4.04922,0,-210.907 0/1:114:95,19:95:3769:19:757:-34.1347,0,-304.9 0/0:111:111,0:111:4328:0:0:0,-33.4143,-389.495 0/0:99:99,0:99:3926:0:0:0,-29.802,-353.344 dDocent_Contig_8739 43 . A G 875.073 . AB=0.281481;ABP=59.0021;AC=5;AF=0.416667;AN=12;AO=39;CIGAR=1X;DP=153;DPB=153;DPRA=0;EPP=87.6977;EPPR=250.558;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.564103;PAIREDR=0.596491;PAO=0;PQA=0;PQR=0;PRO=0;QA=1547;QR=4535;RO=114;RPL=0;RPP=87.6977;RPPR=250.558;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=114;SRP=250.558;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:20,5:20:797:5:204:-11.2183,0,-64.5227 0/1:26:18,8:18:713:8:315:-20.8881,0,-56.6709 0/1:18:14,4:14:546:4:155:-8.90673,0,-44.0617 0/0:18:17,1:17:685:1:41:0,-1.32397,-57.886 0/1:24:17,7:17:678:7:274:-17.7995,0,-54.1256 0/1:42:28,14:28:1116:14:558:-37.9166,0,-88.0833 dDocent_Contig_8740 33 . C T 1896.46 . AB=0.0465116;ABP=156.629;AC=0;AF=0;AN=12;AO=4;CIGAR=1X3M7I6M1X4M;DP=276;DPB=275.533;DPRA=0;EPP=11.6962;EPPR=406.904;GTI=0;LEN=1;MEANALT=2.5;MQM=34;MQMR=60;NS=6;NUMALT=4;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.817204;PAO=0;PQA=0;PQR=0;PRO=0;QA=105;QR=7220;RO=186;RPL=0;RPP=11.6962;RPPR=406.904;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=186;SRP=406.904;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:49:34,2,0,0,13:34:1317:2,0,0,13:28,0,0,525:-33.2985,-42.1807,-149.75,-43.5335,-150.352,-151.733,-43.5335,-150.352,-151.733,-151.733,0,-107.068,-108.444,-108.444,-104.531 0|0:49:30,0,0,0,19:30:1149:0,0,0,19:0,0,0,752:-53.2534,-62.2843,-156.563,-62.2843,-156.563,-156.563,-62.2843,-156.563,-156.563,-156.563,0,-94.6689,-94.6689,-94.6689,-88.9494 0|0:37:13,2,2,0,20:13:504:2,2,0,20:77,82,0,795:-61.5337,-59.1422,-99.9419,-58.6778,-93.7749,-99.4784,-65.4471,-100.544,-100.08,-106.849,0,-35.0934,-34.6279,-41.3987,-35.3781 0|0:29:23,0,0,0,6:23:891:0,0,0,6:0,0,0,238:-13.0634,-19.9871,-93.1742,-19.9871,-93.1742,-93.1742,-19.9871,-93.1742,-93.1742,-93.1742,0,-73.5815,-73.5815,-73.5815,-71.7753 0|0:48:39,0,0,0,9:39:1508:0,0,0,9:0,0,0,360:-18.3128,-30.0529,-153.899,-30.0529,-153.899,-153.899,-30.0529,-153.899,-153.899,-153.899,0,-124.243,-124.243,-124.243,-121.534 0|0:64:47,0,0,5,11:47:1851:0,0,5,11:0,0,201,432:-21.4062,-35.5547,-187.841,-35.5547,-187.841,-187.841,-18.9812,-171.276,-171.276,-169.771,0,-152.313,-152.313,-135.748,-149.002 dDocent_Contig_8741 17 . T A 790.903 . AB=0.179592;ABP=221.478;AC=3;AF=0.25;AN=12;AO=52;CIGAR=1X;DP=470;DPB=470;DPRA=1.24615;EPP=115.927;EPPR=910.686;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.961538;PAIREDR=0.9689;PAO=0;PQA=0;PQR=0;PRO=0;QA=2071;QR=16637;RO=418;RPL=0;RPP=115.927;RPPR=910.686;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=418;SRP=910.686;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:76:71,5:71:2828:5:204:0,-4.13425,-235.895 0/1:115:98,17:98:3916:17:672:-26.1882,0,-317.818 0/1:78:60,18:60:2387:18:717:-41.3758,0,-191.506 0/1:52:43,9:43:1725:9:356:-16.7482,0,-139.815 0/0:65:65,0:65:2559:0:0:0,-19.5669,-230.456 0/0:84:81,3:81:3222:3:122:0,-13.914,-278.683 dDocent_Contig_8742 11 . T C 5367.22 . AB=0.0277427;ABP=1539.2;AC=0;AF=0;AN=12;AO=22;CIGAR=1X3M1D1M;DP=1157;DPB=1153.33;DPRA=0;EPP=50.7827;EPPR=1870.49;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.978009;PAO=0;PQA=0;PQR=0;PRO=0;QA=832;QR=33458;RO=864;RPL=0;RPP=50.7827;RPPR=1879.16;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=863;SRP=1870.49;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:202:158,3,40:158:6141:3,40:106,1545:-79.341,-118.274,-621.984,0,-496.008,-492.598 0|0:260:208,14,31:208:8029:14,31:540,1216:-37.3918,-55.6662,-710.795,0,-615.007,-650.017 0|0:153:118,4,29:118:4621:4,29:146,1105:-55.1086,-78.7041,-457.467,0,-368.045,-371.243 0|0:178:142,1,34:142:5476:1,34:40,1334:-66.9515,-106.402,-555.732,0,-446.327,-439.387 0|0:192:130,0,58:130:5008:0,58:0,2228:-143.757,-182.891,-594.074,0,-411.194,-393.734 0|0:172:108,0,62:108:4183:0,62:0,2407:-165.394,-197.905,-541.526,0,-343.763,-325.099 dDocent_Contig_8743 25 . G A 6896.91 . AB=0.708333;ABP=39.2015;AC=4;AF=0.333333;AN=12;AO=217;CIGAR=1X;DP=293;DPB=293;DPRA=6.325;EPP=474.22;EPPR=168.042;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8330;QR=3007;RO=76;RPL=0;RPP=474.22;RPPR=168.042;RPR=217;RUN=1;SAF=217;SAP=474.22;SAR=0;SRF=76;SRP=168.042;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:13:13,0:13:529:0:0:0,-3.91339,-47.9563 0/0:15:15,0:15:595:0:0:0,-4.51545,-53.8892 0/0:12:12,0:12:473:0:0:0,-3.61236,-42.9179 0/1:35:3,32:3:122:32:1188:-96.6536,0,-0.836442 1/1:157:8,149:8:323:149:5722:-485.393,-17.8231,0 0/1:61:25,36:25:965:36:1420:-109.698,0,-68.781 dDocent_Contig_8744 29 . T C 57.8912 . AB=0.115385;ABP=103.232;AC=3;AF=0.25;AN=12;AO=13;CIGAR=1X;DP=166;DPB=166;DPRA=1.02963;EPP=31.2394;EPPR=335.246;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=507;QR=5994;RO=153;RPL=0;RPP=31.2394;RPPR=335.246;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=153;SRP=335.246;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1015:0:0:0,-8.12781,-91.6359 0/0:28:26,2:26:1021:2:77:0,-1.1197,-84.8744 0/1:12:11,1:11:420:1:38:-0.184909,0,-34.5323 0/1:19:17,2:17:662:2:78:-1.68373,0,-54.1897 0/1:47:41,6:41:1627:6:234:-7.27731,0,-132.516 0/0:33:31,2:31:1249:2:80:0,-2.34241,-105.088 dDocent_Contig_8746 13 . T C 6814.39 . AB=0.241123;ABP=707.939;AC=6;AF=0.5;AN=12;AO=292;CIGAR=1X;DP=1211;DPB=1211;DPRA=0;EPP=637.08;EPPR=1998.59;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11734;QR=36802;RO=919;RPL=0;RPP=637.08;RPPR=1998.59;RPR=292;RUN=1;SAF=292;SAP=637.08;SAR=0;SRF=919;SRP=1998.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:140:103,37:103:4160:37:1474:-90.7596,0,-332.209 0/1:263:214,49:214:8601:49:1982:-99.3961,0,-694.396 0/1:265:171,94:171:6820:94:3771:-259.615,0,-533.712 0/1:224:142,82:142:5670:82:3289:-228.626,0,-442.687 0/1:152:137,15:137:5472:15:612:-9.66,0,-446.546 0/1:167:152,15:152:6079:15:606:-4.60461,0,-496.603 dDocent_Contig_8747 11 . T C 1026.55 . AB=0.179739;ABP=275.622;AC=3;AF=0.25;AN=12;AO=55;CIGAR=1X;DP=473;DPB=473;DPRA=1.83234;EPP=122.441;EPPR=910.686;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.933014;PAO=0;PQA=0;PQR=0;PRO=0;QA=2193;QR=16804;RO=418;RPL=0;RPP=122.441;RPPR=910.686;RPR=55;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=418;SRP=910.686;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:54,0:54:2181:0:0:0,-16.2556,-196.457 0/0:70:70,0:70:2777:0:0:0,-21.0721,-250.031 0/0:43:43,0:43:1723:0:0:0,-12.9443,-155.29 0/1:85:78,7:78:3153:7:284:-0.345865,0,-258.239 0/1:92:64,28:64:2569:28:1124:-73.7443,0,-203.646 0/1:129:109,20:109:4401:20:785:-32.1306,0,-357.178 dDocent_Contig_8748 99 . G A 228.721 . AB=0.175;ABP=76.4061;AC=3;AF=0.25;AN=12;AO=20;CIGAR=1X;DP=182;DPB=182;DPRA=0;EPP=46.4397;EPPR=354.789;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.567901;PAO=0;PQA=0;PQR=0;PRO=0;QA=811;QR=6473;RO=162;RPL=20;RPP=46.4397;RPPR=354.789;RPR=0;RUN=1;SAF=0;SAP=46.4397;SAR=20;SRF=0;SRP=354.789;SRR=162;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:20,1:20:803:1:41:0,-2.22706,-68.491 0/0:55:52,3:52:2070:3:123:0,-5.09186,-175.025 0/1:20:17,3:17:676:3:117:-4.88798,0,-55.1472 0/1:41:32,9:32:1260:9:368:-21.1431,0,-101.326 0/0:26:24,2:24:970:2:81:0,-0.141046,-79.9129 0/1:19:17,2:17:694:2:81:-1.96616,0,-57.068 dDocent_Contig_8749 16 . T G 81.5089 . AB=0.123457;ABP=102.764;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=232;DPB=232;DPRA=1.07285;EPP=24.725;EPPR=485.077;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.2;PAIREDR=0.396396;PAO=0;PQA=0;PQR=0;PRO=0;QA=389;QR=8812;RO=222;RPL=0;RPP=24.725;RPPR=485.077;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=222;SRP=485.077;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:40,0:40:1596:0:0:0,-12.0412,-143.874 0/0:41:41,0:41:1609:0:0:0,-12.3422,-145.05 0/0:21:21,0:21:830:0:0:0,-6.32163,-75.0123 0/0:49:49,0:49:1972:0:0:0,-14.7505,-177.674 0/1:37:33,4:33:1324:4:162:-3.82885,0,-108.285 0/1:44:38,6:38:1481:6:227:-7.54282,0,-120.285 dDocent_Contig_8750 41 . G A 3315.43 . AB=0.553957;ABP=6.52527;AC=4;AF=0.333333;AN=12;AO=110;CIGAR=1X;DP=279;DPB=279;DPRA=4.09231;EPP=241.872;EPPR=369.989;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.990909;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4307;QR=6660;RO=169;RPL=0;RPP=241.872;RPPR=369.989;RPR=110;RUN=1;SAF=110;SAP=241.872;SAR=0;SRF=169;SRP=369.989;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:84:35,49:35:1369:49:1923:-147.987,0,-98.1869 1/1:29:0,29:0:0:29:1156:-104.319,-8.72987,0 0/0:60:57,3:57:2230:3:117:0,-7.15251,-189.96 0/1:55:27,28:27:1085:28:1097:-82.4586,0,-81.3801 0/0:13:13,0:13:520:0:0:0,-3.91339,-47.1457 0/0:38:37,1:37:1456:1:14:0,-10.0391,-129.89 dDocent_Contig_8751 32 . G A 197.97 . AB=0.150943;ABP=59.0998;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=2X;DP=94;DPB=94;DPRA=3.88889;EPP=22.5536;EPPR=172.385;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.987179;PAO=0;PQA=0;PQR=0;PRO=0;QA=359;QR=3120;RO=78;RPL=0;RPP=22.5536;RPPR=172.385;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=78;SRP=172.385;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:31:24,3,4:24:954:3,4:117,158:-5.77989,-3.39017,-81.0315,0,-68.9332,-77.3448 0|1:22:17,5,0:17:684:5,0:201,0:-11.8484,0,-55.2658,-16.966,-56.771,-73.3353 0|0:12:9,0,3:9:363:0,3:0,118:-7.39036,-10.0996,-40.0294,0,-30.3252,-29.4221 0|0:17:16,1,0:16:643:1,0:41,0:0,-1.02294,-54.1104,-4.81648,-54.4114,-57.7959 0|0:5:5,0,0:5:197:0,0:0,0:0,-1.50515,-18.1059,-1.50515,-18.1059,-18.1059 0|0:7:7,0,0:7:279:0,0:0,0:0,-2.10721,-25.4806,-2.10721,-25.4806,-25.4806 dDocent_Contig_8752 7 . C T 171.663 . AB=0.12;ABP=222.503;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1X;DP=339;DPB=339;DPRA=1.80165;EPP=52.9542;EPPR=689.196;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.990506;PAO=0;PQA=0;PQR=0;PRO=0;QA=881;QR=12018;RO=316;RPL=0;RPP=52.9542;RPPR=689.196;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=316;SRP=689.196;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:1073:0:0:0,-8.72987,-96.8627 0/0:28:28,0:28:1054:0:0:0,-8.42884,-95.1652 0/1:102:91,11:91:3442:11:424:-7.80911,0,-279.208 0/0:43:41,2:41:1579:2:77:0,-5.63515,-135.07 0/1:73:63,10:63:2418:10:380:-12.579,0,-195.854 0/0:64:64,0:64:2452:0:0:0,-19.2659,-220.887 dDocent_Contig_8753 7 . C T 3856.45 . AB=0.35867;ABP=76.0512;AC=6;AF=0.5;AN=12;AO=151;CIGAR=1X;DP=421;DPB=421;DPRA=0;EPP=330.903;EPPR=584.965;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5784;QR=10303;RO=268;RPL=0;RPP=330.903;RPPR=584.965;RPR=151;RUN=1;SAF=151;SAP=330.903;SAR=0;SRF=268;SRP=584.965;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:67:55,12:55:2118:12:463:-21.8523,0,-170.678 0/1:105:58,46:58:2245:46:1743:-125.55,0,-170.688 0/1:79:72,7:72:2778:7:272:-1.06586,0,-226.417 0/1:73:47,25:47:1788:25:966:-65.4593,0,-139.38 0/1:63:19,44:19:728:44:1686:-133.035,0,-46.8858 0/1:34:17,17:17:646:17:654:-48.9616,0,-48.2382 dDocent_Contig_8754 209 . N G 337.381 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=363;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:200:-18.3784,-1.50515,0 1/1:4:0,4:0:0:4:163:-15.0584,-1.20412,0 dDocent_Contig_8755 29 . G T 42.2967 . AB=0.133333;ABP=38.0434;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=175;DPB=175;DPRA=1.03448;EPP=11.6962;EPPR=292.553;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0.631579;PAO=0;PQA=0;PQR=0;PRO=0;QA=160;QR=6691;RO=171;RPL=0;RPP=11.6962;RPPR=374.332;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=161;SRP=292.553;SRR=10;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:569:0:0:0,-4.21442,-51.5519 0/0:55:55,0:55:2147:0:0:0,-16.5566,-193.412 0/0:18:18,0:18:723:0:0:0,-5.41854,-65.3953 0/0:35:35,0:35:1355:0:0:0,-10.536,-122.21 0/1:30:26,4:26:1011:4:160:-5.75253,0,-82.2558 0/0:23:23,0:23:886:0:0:0,-6.92369,-80.0433 dDocent_Contig_8756 27 . A C 153.354 . AB=0.352941;ABP=6.20364;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=61;DPB=61;DPRA=1.93182;EPP=16.0391;EPPR=122.441;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=240;QR=2190;RO=55;RPL=0;RPP=16.0391;RPPR=122.441;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=55;SRP=122.441;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:8:8,0:8:320:0:0:0,-2.40824,-29.1673 0/0:9:9,0:9:368:0:0:0,-2.70927,-33.4854 0/0:14:14,0:14:543:0:0:0,-4.21442,-49.2072 0/0:3:3,0:3:121:0:0:0,-0.90309,-11.2802 0/1:17:11,6:11:433:6:240:-16.8581,0,-34.2061 0/0:10:10,0:10:405:0:0:0,-3.0103,-36.8104 dDocent_Contig_8757 21 . C T 517.409 . AB=0.195122;ABP=36.112;AC=4;AF=0.333333;AN=12;AO=23;CIGAR=1X;DP=219;DPB=219;DPRA=0.642308;EPP=52.9542;EPPR=428.619;GTI=0;LEN=1;MEANALT=1;MQM=53.0435;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.652174;PAIREDR=0.994898;PAO=0;PQA=0;PQR=0;PRO=0;QA=903;QR=7833;RO=196;RPL=0;RPP=52.9542;RPPR=428.619;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=196;SRP=428.619;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:11:0,11:0:0:11:424:-38.5033,-3.31133,0 0/1:26:20,6:20:807:6:243:-13.1912,0,-65.1201 0/1:15:13,2:13:512:2:82:-3.26423,0,-41.9082 0/0:39:36,3:36:1430:3:114:0,-1.74006,-118.956 0/0:76:75,1:75:3009:1:40:0,-19.1793,-267.182 0/0:52:52,0:52:2075:0:0:0,-15.6536,-186.937 dDocent_Contig_8758 57 . A G 641.892 . AB=0.328947;ABP=22.325;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=1X;DP=369;DPB=369;DPRA=1.29693;EPP=57.2971;EPPR=749.997;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.962209;PAO=0;PQA=0;PQR=0;PRO=0;QA=981;QR=13452;RO=344;RPL=25;RPP=57.2971;RPPR=749.997;RPR=0;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=344;SRP=749.997;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:55:55,0:55:2162:0:0:0,-16.5566,-194.771 0/1:76:51,25:51:1988:25:981:-65.7121,0,-156.244 0/0:56:56,0:56:2202:0:0:0,-16.8577,-198.368 0/0:48:48,0:48:1862:0:0:0,-14.4494,-167.783 0/0:71:71,0:71:2831:0:0:0,-21.3731,-254.899 0/0:63:63,0:63:2407:0:0:0,-18.9649,-216.797 dDocent_Contig_8759 41 . A T 203.833 . AB=0.243902;ABP=26.3669;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=173;DPB=173;DPRA=0.587156;EPP=26.8965;EPPR=354.789;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.969136;PAO=0;PQA=0;PQR=0;PRO=0;QA=431;QR=6370;RO=162;RPL=0;RPP=26.8965;RPPR=354.789;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=162;SRP=354.789;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:28,8:28:1109:8:310:-17.4245,0,-89.2641 0/0:62:62,0:62:2466:0:0:0,-18.6639,-222.092 0/0:23:22,1:22:863:1:40:0,-2.92801,-73.987 0/0:37:37,0:37:1412:0:0:0,-11.1381,-127.329 0/0:10:10,0:10:398:0:0:0,-3.0103,-36.1785 0/1:5:3,2:3:122:2:81:-6.18058,0,-9.86734 dDocent_Contig_8760 153 . G A 492.256 . AB=0.285714;ABP=30.9292;AC=1;AF=0.1;AN=10;AO=20;CIGAR=1X;DP=313;DPB=313;DPRA=1.15226;EPP=46.4397;EPPR=639.252;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=792;QR=11649;RO=293;RPL=0;RPP=46.4397;RPPR=639.252;RPR=20;RUN=1;SAF=0;SAP=46.4397;SAR=20;SRF=0;SRP=639.252;SRR=293;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:70:50,20:50:1953:20:792:-50.5267,0,-154.884 0/0:100:100,0:100:3990:0:0:0,-30.103,-359.076 0/0:64:64,0:64:2573:0:0:0,-19.2659,-231.694 0/0:59:59,0:59:2348:0:0:0,-17.7608,-211.469 ./.:.:.:.:.:.:.:. 0/0:20:20,0:20:785:0:0:0,-6.0206,-70.9631 dDocent_Contig_8761 2 . A G 14056.8 . AB=0.0650407;ABP=205.134;AC=0;AF=0;AN=12;AO=8;CIGAR=3X2M;DP=605;DPB=607.8;DPRA=1.20588;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=3;MQM=50;MQMR=0;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=266;QR=0;RO=0;RPL=0;RPP=20.3821;RPPR=0;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:94:0,1,0,93:0:0:1,0,93:40,0,2939:-250.838,-248.901,-248.6,-250.838,-248.901,-250.838,-27.9958,-25.8103,-27.9958,0 0|0:110:0,0,0,110:0:0:0,0,110:0,0,3074:-260.628,-260.628,-260.628,-260.628,-260.628,-260.628,-33.1133,-33.1133,-33.1133,0 0|0:101:0,0,0,101:0:0:0,0,101:0,0,2413:-198.458,-198.458,-198.458,-198.458,-198.458,-198.458,-30.404,-30.404,-30.404,0 0|0:103:0,0,0,103:0:0:0,0,103:0,0,3186:-270.81,-270.81,-270.81,-270.81,-270.81,-270.81,-31.0061,-31.0061,-31.0061,0 0|0:123:0,20,8,95:0:0:20,8,95:784,266,2686:-260.437,-196.518,-190.497,-238.971,-175.05,-236.563,-63.9404,0,-42.4939,-35.3426 0|0:74:0,12,0,62:0:0:12,0,62:480,0,1763:-167.734,-128.812,-125.199,-167.734,-128.812,-167.734,-39.2948,0,-39.2948,-20.6309 dDocent_Contig_8762 31 . T A 6490.03 . AB=0.365817;ABP=107.322;AC=6;AF=0.5;AN=12;AO=244;CIGAR=1X;DP=667;DPB=667;DPRA=0;EPP=532.85;EPPR=919.372;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9552;QR=16633;RO=422;RPL=0;RPP=532.85;RPPR=919.372;RPR=244;RUN=1;SAF=244;SAP=532.85;SAR=0;SRF=422;SRP=919.372;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:134:120,14:120:4731:14:556:-10.0455,0,-385.352 0/1:200:160,40:160:6316:40:1570:-81.3369,0,-508.001 0/1:69:43,26:43:1667:26:1035:-72.6731,0,-129.477 0/1:109:29,80:29:1157:80:3093:-245.65,0,-71.6006 0/1:105:51,53:51:2008:53:2067:-154.507,0,-149.193 0/1:50:19,31:19:754:31:1231:-96.0116,0,-53.1288 dDocent_Contig_8763 10 . T A 96.4868 . AB=0.103659;ABP=226.778;AC=1;AF=0.0833333;AN=12;AO=69;CIGAR=1X;DP=1115;DPB=1115;DPRA=0;EPP=152.842;EPPR=2274.37;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=57.8757;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0724638;PAIREDR=0.201721;PAO=0;PQA=0;PQR=0;PRO=0;QA=2686;QR=41450;RO=1046;RPL=0;RPP=152.842;RPPR=2274.37;RPR=69;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=1046;SRP=2274.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:254:233,21:233:9218:21:819:0,-2.43767,-752.572 0/0:212:194,18:194:7673:18:703:0,-0.223709,-621.129 0/0:175:173,2:173:6913:2:66:0,-46.4155,-608.982 0/1:164:147,17:147:5809:17:669:-11.1711,0,-470.748 0/0:166:156,10:156:6125:10:388:0,-14.6971,-514.086 0/0:144:143,1:143:5712:1:41:0,-39.2538,-506.365 dDocent_Contig_8764 67 . G T 591.473 . AB=0.195122;ABP=135.417;AC=4;AF=0.333333;AN=12;AO=32;CIGAR=1X;DP=209;DPB=209;DPRA=1.82222;EPP=72.4974;EPPR=385.189;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1271;QR=6849;RO=176;RPL=32;RPP=72.4974;RPPR=385.189;RPR=0;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=176;SRP=385.189;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:53:40,13:40:1541:13:524:-31.5529,0,-122.97 0/1:61:54,6:54:2066:6:238:-3.3239,0,-167.662 0/1:17:12,5:12:480:5:191:-12.4383,0,-38.4321 0/1:33:25,8:25:985:8:318:-19.0507,0,-79.0137 0/0:38:38,0:38:1497:0:0:0,-11.4391,-134.976 0/0:7:7,0:7:280:0:0:0,-2.10721,-25.5713 dDocent_Contig_8765 98 . N A 65.5375 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=2X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=69;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 dDocent_Contig_8766 85 . C G 374.505 . AB=0.27907;ABP=39.4708;AC=4;AF=0.333333;AN=12;AO=25;CIGAR=1X;DP=104;DPB=104;DPRA=6.73333;EPP=57.2971;EPPR=174.557;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=805;QR=2660;RO=79;RPL=25;RPP=57.2971;RPPR=174.557;RPR=0;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=79;SRP=174.557;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:3:3,0:3:101:0:0:0,-0.90309,-9.42313 0/1:15:13,2:13:432:2:69:-2.03721,0,-34.6819 0/1:30:20,10:20:679:10:298:-18.0775,0,-52.3941 0/0:15:14,1:14:465:1:36:0,-0.917175,-38.568 0/1:26:20,6:20:672:6:198:-10.3174,0,-52.9663 0/1:15:9,6:9:311:6:204:-14.1783,0,-23.8091 dDocent_Contig_8767 23 . T C 711.005 . AB=0.88;ABP=34.3664;AC=1;AF=0.0833333;AN=12;AO=22;CIGAR=1X;DP=162;DPB=162;DPRA=0.912409;EPP=50.7827;EPPR=307.016;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=887;QR=5609;RO=140;RPL=0;RPP=50.7827;RPPR=307.016;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=140;SRP=307.016;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:46:46,0:46:1870:0:0:0,-13.8474,-168.495 0/0:30:30,0:30:1202:0:0:0,-9.0309,-108.451 0/0:29:29,0:29:1172:0:0:0,-8.72987,-105.755 0/0:20:20,0:20:765:0:0:0,-6.0206,-69.1553 0/1:25:3,22:3:111:22:887:-72.6127,0,-2.82599 0/0:12:12,0:12:489:0:0:0,-3.61236,-44.3613 dDocent_Contig_8768 14 . C T 3753.66 . AB=0.0658153;ABP=1669.92;AC=2;AF=0.166667;AN=12;AO=67;CIGAR=1X2M1X;DP=1018;DPB=1018;DPRA=0;EPP=148.499;EPPR=1618.59;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2653;QR=29186;RO=744;RPL=0;RPP=148.499;RPPR=1618.59;RPR=67;RUN=1;SAF=67;SAP=148.499;SAR=0;SRF=744;SRP=1618.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:175:128,12,22,12:128:5034:12,22,12:460,883,481:-34.2298,-35.0128,-445.478,0,-376.337,-407.465,-33.1314,-409.463,-374.46,-443.601 0|0:275:215,2,56,2:215:8467:2,56,2:69,2221,80:-118.113,-177.234,-873.172,0,-690.961,-679.706,-176.244,-867.184,-689.973,-872.184 0|0:203:153,7,40,3:153:5976:7,40,3:283,1599,119:-85.6449,-108.369,-597.504,0,-467.905,-479.197,-121.907,-589.815,-481.442,-612.245 0|0:188:131,12,34,11:131:5119:12,34,11:480,1350,440:-71.695,-71.5899,-488.789,0,-381.269,-410.574,-74.8864,-456.158,-384.566,-492.387 0|1:77:59,10,5,3:59:2306:10,5,3:400,204,123:-15.1845,0,-186.551,-16.1123,-172.729,-204.175,-22.7918,-179.408,-195.527,-211.456 0|1:100:58,24,18,0:58:2284:24,18,0:961,684,0:-61.7204,0,-180.677,-23.1153,-131.831,-205.583,-79.1801,-187.901,-211.001,-267.072 dDocent_Contig_8770 142 . A T 76.159 . AB=0.16129;ABP=33.9012;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=84;DPB=84;DPRA=2.92453;EPP=13.8677;EPPR=174.557;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.810127;PAO=0;PQA=0;PQR=0;PRO=0;QA=201;QR=3136;RO=79;RPL=0;RPP=13.8677;RPPR=174.557;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=174.557;SRR=79;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:2:2,0:2:74:0:0:0,-0.60206,-7.02402 0/0:7:7,0:7:283:0:0:0,-2.10721,-25.8434 0/0:11:11,0:11:436:0:0:0,-3.31133,-39.5916 0/0:16:16,0:16:640:0:0:0,-4.81648,-57.932 0/1:31:26,5:26:1032:5:201:-9.13859,0,-83.8394 0/0:17:17,0:17:671:0:0:0,-5.11751,-60.7094 dDocent_Contig_8771 113 . G T 194.968 . AB=0.257143;ABP=20.9405;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=100;DPB=100;DPRA=1.07692;EPP=22.5536;EPPR=200.614;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.777778;PAIREDR=0.703297;PAO=0;PQA=0;PQR=0;PRO=0;QA=361;QR=3648;RO=91;RPL=0;RPP=22.5536;RPPR=200.614;RPR=9;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=200.614;SRR=91;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:396:0:0:0,-3.0103,-35.9954 0/0:7:7,0:7:280:0:0:0,-2.10721,-25.5704 0/1:14:10,4:10:403:4:160:-10.5694,0,-32.4156 0/1:21:16,5:16:640:5:201:-12.1493,0,-51.6105 0/0:21:21,0:21:836:0:0:0,-6.32163,-75.5509 0/0:27:27,0:27:1093:0:0:0,-8.12781,-98.6548 dDocent_Contig_8772 11 . C G 257.925 . AB=0.227273;ABP=45.6501;AC=3;AF=0.25;AN=12;AO=15;CIGAR=3X1M1X;DP=176;DPB=177.2;DPRA=0.6;EPP=35.5824;EPPR=350.446;GTI=0;LEN=1;MEANALT=1;MQM=38.8667;MQMR=59.0875;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0;PAIREDR=0.95625;PAO=3;PQA=99;PQR=0;PRO=3;QA=586;QR=6380;RO=160;RPL=0;RPP=35.5824;RPPR=350.446;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=160;SRP=350.446;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:35:25,10:25:997:10:396:-22.2844,0,-79.4915 0|0:32:32,0:32:1279:0:0:0,-9.63296,-115.379 0|1:19:17,2:17:672:2:70:-0.202814,0,-54.9956 0|1:12:9,3:9:365:3:120:-6.7288,0,-29.6025 0|0:45:44,0:44:1747:0:0:0,-13.2453,-157.304 0|0:33:33,0:33:1320:0:0:0,-9.93399,-115.022 dDocent_Contig_8774 68 . C T 74.5218 . AB=0.166667;ABP=37.7539;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=305;DPB=305;DPRA=0.669145;EPP=16.0391;EPPR=652.281;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.565217;PAO=0;PQA=0;PQR=0;PRO=0;QA=213;QR=11059;RO=299;RPL=3;RPP=3.0103;RPPR=35.6114;RPR=3;RUN=1;SAF=3;SAP=3.0103;SAR=3;SRF=183;SRP=35.6114;SRR=116;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:30,6:30:1112:6:213:-8.67403,0,-89.5313 0/0:61:61,0:61:2291:0:0:0,-18.3628,-206.416 0/0:63:63,0:63:2335:0:0:0,-18.9649,-210.349 0/0:54:54,0:54:2003:0:0:0,-16.2556,-180.491 0/0:54:54,0:54:1989:0:0:0,-16.2556,-179.243 0/0:37:37,0:37:1329:0:0:0,-11.1381,-119.887 dDocent_Contig_8775 115 . T C 49.1766 . AB=0.230769;ABP=11.1951;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=115;DPB=115;DPRA=0.637255;EPP=9.52472;EPPR=246.215;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.6875;PAO=0;PQA=0;PQR=0;PRO=0;QA=111;QR=4094;RO=112;RPL=0;RPP=9.52472;RPPR=246.215;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=246.215;SRR=112;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:367:0:0:0,-3.0103,-33.3784 0/0:26:26,0:26:960:0:0:0,-7.82678,-86.7186 0/0:15:15,0:15:548:0:0:0,-4.51545,-49.6581 0/0:41:41,0:41:1483:0:0:0,-12.3422,-133.759 0/0:10:10,0:10:370:0:0:0,-3.0103,-33.6502 0/1:13:10,3:10:366:3:111:-6.44053,0,-29.3744 dDocent_Contig_8776 11 . A T 5485.86 . AB=0.339286;ABP=116.082;AC=6;AF=0.5;AN=12;AO=171;CIGAR=1X7M;DP=504;DPB=504;DPRA=0;EPP=374.332;EPPR=519.821;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6863;QR=9336;RO=238;RPL=0;RPP=374.332;RPPR=519.821;RPR=171;RUN=1;SAF=171;SAP=374.332;SAR=0;SRF=238;SRP=519.821;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:66:37,7,22:37:1452:7,22:273,887:-61.9829,-50.6855,-167.988,0,-96.9797,-112.795 0|1:58:23,5,30:23:912:5,30:199,1208:-92.6413,-83.1794,-156.743,0,-58.6842,-66.0397 0|1:120:63,13,44:63:2478:13,44:515,1768:-126.721,-103.298,-303.215,0,-161.443,-190.587 0|1:67:31,5,31:31:1209:5,31:201,1225:-91.4581,-84.2247,-182.091,0,-82.7974,-90.0315 0|1:98:53,29,16:53:2067:29,16:1149,656:-78.6095,0,-161.15,-40.4139,-115.73,-205.489 0|1:95:31,36,28:31:1218:36,28:1430,1119:-108.395,0,-89.3422,-25.5628,-8.01354,-117.315 dDocent_Contig_8777 28 . A G 3016.59 . AB=0.522167;ABP=3.87675;AC=6;AF=0.5;AN=12;AO=106;CIGAR=1X4M;DP=203;DPB=203;DPRA=0;EPP=233.186;EPPR=200.614;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.990566;PAIREDR=0.978022;PAO=0;PQA=0;PQR=0;PRO=0;QA=4129;QR=3489;RO=91;RPL=0;RPP=233.186;RPPR=200.614;RPR=106;RUN=1;SAF=106;SAP=233.186;SAR=0;SRF=91;SRP=200.614;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:17:14,0,2:14:543:0,2:0,74:-1.81316,-6.02758,-50.6425,0,-44.5907,-43.9886 0|1:20:12,1,7:12:460:1,7:40,279:-19.3622,-19.6793,-57.1207,0,-34.4404,-35.6295 0|1:25:18,3,4:18:694:3,4:118,157:-7.49266,-3.20417,-59.2758,0,-47.266,-55.7696 0|1:27:13,1,13:13:502:1,13:40,499:-37.0239,-37.6411,-78.567,0,-37.917,-37.2996 0|1:37:16,0,21:16:606:0,21:0,825:-63.4237,-68.2402,-117.913,0,-50.0577,-43.7361 0|1:77:18,0,59:18:684:0,59:0,2295:-183.533,-188.952,-245.036,0,-56.4661,-38.7053 dDocent_Contig_8778 31 . A G 87.5579 . AB=0.227273;ABP=17.2236;AC=2;AF=0.166667;AN=12;AO=5;CIGAR=1X;DP=83;DPB=83;DPRA=0.721311;EPP=13.8677;EPPR=172.385;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.3462;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.987179;PAO=0;PQA=0;PQR=0;PRO=0;QA=198;QR=3025;RO=78;RPL=0;RPP=13.8677;RPPR=172.385;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=78;SRP=172.385;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:567:0:0:0,-4.51545,-51.3579 0/0:12:12,0:12:456:0:0:0,-3.61236,-38.5697 0/1:7:4,3:4:158:3:122:-9.26528,0,-12.4931 0/1:15:13,2:13:506:2:76:-2.69809,0,-41.363 0/0:20:20,0:20:786:0:0:0,-6.0206,-71.0611 0/0:14:14,0:14:552:0:0:0,-4.21442,-50.0224 dDocent_Contig_8779 98 . N G 116.235 . AB=0;ABP=0;AC=4;AF=0.666667;AN=6;AO=4;CIGAR=1X;DP=5;DPB=5;DPRA=2;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=115;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:1:0,0:0:0:0:0:0,0,0 1/1:2:0,2:0:0:2:50:-4.74974,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:65:-6.17345,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_8780 107 . N A 93.0997 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=93;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:58:-5.50862,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_8781 48 . A G 5216.73 . AB=0.493261;ABP=3.15663;AC=2;AF=0.166667;AN=12;AO=184;CIGAR=1X;DP=678;DPB=678;DPRA=2.25962;EPP=402.561;EPPR=1075.72;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.987854;PAO=0;PQA=0;PQR=0;PRO=0;QA=7113;QR=19331;RO=494;RPL=0;RPP=402.561;RPPR=1075.72;RPR=184;RUN=1;SAF=184;SAP=402.561;SAR=0;SRF=494;SRP=1075.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:73:73,0:73:2845:0:0:0,-21.9752,-256.18 0/0:99:98,1:98:3846:1:41:0,-25.7074,-342.065 0/0:90:90,0:90:3507:0:0:0,-27.0927,-315.7 0/0:45:45,0:45:1761:0:0:0,-13.5463,-158.706 0/1:130:74,56:74:2917:56:2129:-152.66,0,-223.516 0/1:241:114,127:114:4455:127:4943:-372.235,0,-328.38 dDocent_Contig_8782 40 . T A 155.13 . AB=0.2;ABP=34.2795;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=318;DPB=318;DPRA=0.719424;EPP=20.3821;EPPR=658.907;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993548;PAO=0;PQA=0;PQR=0;PRO=0;QA=319;QR=12078;RO=310;RPL=0;RPP=20.3821;RPPR=676.167;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=308;SRP=658.907;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:48,0:48:1845:0:0:0,-14.4494,-166.277 0/0:66:66,0:66:2584:0:0:0,-19.868,-232.717 0/0:83:83,0:83:3291:0:0:0,-24.9855,-296.268 0/0:52:52,0:52:2025:0:0:0,-15.6536,-182.46 0/0:29:29,0:29:1084:0:0:0,-8.72987,-97.8414 0/1:40:32,8:32:1249:8:319:-17.0359,0,-100.65 dDocent_Contig_8783 13 . T A 1870.09 . AB=0.314894;ABP=72.9502;AC=6;AF=0.5;AN=12;AO=74;CIGAR=1X;DP=235;DPB=235;DPRA=0;EPP=163.699;EPPR=352.617;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.851351;PAIREDR=0.888199;PAO=0;PQA=0;PQR=0;PRO=0;QA=2965;QR=6467;RO=161;RPL=0;RPP=163.699;RPPR=352.617;RPR=74;RUN=1;SAF=74;SAP=163.699;SAR=0;SRF=161;SRP=352.617;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:9,19:9:356:19:767:-60.9213,0,-23.971 0/1:42:38,4:38:1514:4:163:-2.41517,0,-123.857 0/1:43:28,15:28:1126:15:601:-41.485,0,-88.6777 0/1:44:30,14:30:1207:14:545:-36.1424,0,-95.6573 0/1:37:21,16:21:855:16:644:-47.1529,0,-66.1216 0/1:41:35,6:35:1409:6:245:-10.0872,0,-114.72 dDocent_Contig_8784 116 . T A 201.464 . AB=0.177215;ABP=74.504;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=189;DPB=189;DPRA=1.43636;EPP=33.4109;EPPR=383.018;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.714286;PAIREDR=0.828571;PAO=0;PQA=0;PQR=0;PRO=0;QA=516;QR=6248;RO=175;RPL=0;RPP=33.4109;RPPR=383.018;RPR=14;RUN=1;SAF=0;SAP=33.4109;SAR=14;SRF=0;SRP=383.018;SRR=175;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:557:0:0:0,-4.81648,-50.4501 0/0:24:24,0:24:849:0:0:0,-7.22472,-76.7228 0/0:42:42,0:42:1546:0:0:0,-12.6433,-139.429 0/0:28:28,0:28:1005:0:0:0,-8.42884,-90.7621 0/1:38:30,8:30:1054:8:296:-15.555,0,-83.7223 0/1:41:35,6:35:1237:6:220:-7.81323,0,-99.282 dDocent_Contig_8785 14 . G A 420.692 . AB=0.163522;ABP=159.37;AC=4;AF=0.333333;AN=12;AO=31;CIGAR=1X;DP=225;DPB=225;DPRA=0;EPP=70.3259;EPPR=424.276;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.958763;PAO=0;PQA=0;PQR=0;PRO=0;QA=1244;QR=7619;RO=194;RPL=0;RPP=70.3259;RPPR=424.276;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=194;SRP=424.276;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:22,4:22:859:4:158:-6.7737,0,-69.7915 0/1:39:26,13:26:1044:13:519:-35.3174,0,-82.5107 0/1:49:45,4:45:1751:4:164:-0.399429,0,-143.06 0/1:45:40,5:40:1564:5:204:-5.19768,0,-127.452 0/0:39:36,3:36:1423:3:123:0,-0.275381,-116.86 0/0:27:25,2:25:978:2:76:0,-0.913553,-81.1041 dDocent_Contig_8787 107 . N A 93.3107 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=100;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:100:-9.33053,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_8788 129 . T G 35.7552 . AB=0.166667;ABP=26.1727;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=150;DPB=150;DPRA=1.22581;EPP=16.0391;EPPR=313.531;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.776224;PAO=0;PQA=0;PQR=0;PRO=0;QA=195;QR=5167;RO=143;RPL=0;RPP=16.0391;RPPR=313.531;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=313.531;SRR=143;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:20,4:20:730:4:130:-4.79726,0,-58.8043 0/0:31:31,0:31:1102:0:0:0,-9.33193,-99.4857 0/0:19:18,0:18:644:0:0:0,-5.41854,-57.9276 0/0:33:31,2:31:1127:2:65:0,-3.76054,-95.5659 0/0:30:30,0:30:1087:0:0:0,-9.0309,-98.1407 0/0:13:13,0:13:477:0:0:0,-3.91339,-43.2725 dDocent_Contig_8789 1 . N C 67.4314 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=7I2X;DP=2;DPB=9;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=71;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:71:-6.74206,-0.60206,0 .:.:.:.:.:.:.:. dDocent_Contig_8790 8 . A C 110.149 . AB=0.106742;ABP=242.116;AC=1;AF=0.0833333;AN=12;AO=28;CIGAR=1X;DP=1042;DPB=1042;DPRA=0.7691;EPP=63.8115;EPPR=2202.71;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.94077;PAO=0;PQA=0;PQR=0;PRO=0;QA=1080;QR=38612;RO=1013;RPL=0;RPP=63.8115;RPPR=2202.71;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=1013;SRP=2202.71;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:162:161,0:161:6157:0:0:0,-48.4658,-553.682 0/1:178:159,19:159:6076:19:731:-12.5377,0,-493.205 0/0:119:114,5:114:4380:5:193:0,-18.0811,-376.524 0/0:156:152,4:152:5759:4:156:0,-32.5434,-503.873 0/0:216:216,0:216:8229:0:0:0,-65.0225,-740.415 0/0:211:211,0:211:8011:0:0:0,-63.5173,-720.817 dDocent_Contig_8791 16 . C T 13934.7 . AB=0.0594966;ABP=2212.62;AC=0;AF=0;AN=12;AO=78;CIGAR=1X3M13D1M;DP=1311;DPB=1254.67;DPRA=0;EPP=172.385;EPPR=1290.69;GTI=0;LEN=1;MEANALT=10.8333;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3098;QR=23289;RO=593;RPL=0;RPP=172.385;RPPR=1290.69;RPR=78;RUN=1;SAF=78;SAP=172.385;SAR=0;SRF=593;SRP=1290.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:151:72,6,0,11,45:72:2843:6,0,11,45:238,0,448,1813:-127.761,-129.844,-361.975,-149.435,-363.781,-383.372,-112.476,-326.822,-346.413,-343.102,0,-214.348,-233.939,-196.98,-220.393 0|0:164:82,1,0,1,62:82:3218:1,0,1,62:41,0,41,2475:-179.17,-200.471,-464.821,-203.855,-465.122,-468.506,-200.471,-461.737,-465.122,-464.821,0,-261.289,-264.673,-261.289,-246.009 0|0:227:138,1,1,1,70:138:5418:1,1,1,70:41,40,40,2797:-188.861,-227.019,-672.318,-227.108,-669.324,-672.407,-227.108,-669.324,-669.413,-672.407,0,-442.254,-442.343,-442.343,-424.566 0|0:205:112,13,1,1,62:112:4376:13,1,1,62:514,40,38,2504:-172.714,-164.131,-519.954,-203.134,-520.572,-562.57,-203.313,-520.751,-559.755,-562.749,0,-317.441,-356.446,-356.624,-341.077 0|0:349:116,30,15,0,160:116:4565:30,15,0,160:1187,594,0,6416:-493.689,-430.923,-797.412,-479.719,-757.553,-850.723,-528.608,-806.442,-855.239,-904.128,0,-277.836,-326.632,-375.522,-327.357 0|0:215:73,27,20,0,80:73:2869:27,20,0,80:1077,791,0,3210:-242.501,-175.779,-403.629,-199.382,-346.662,-429.339,-264.477,-411.757,-435.36,-500.455,0,-147.279,-170.883,-235.978,-211.896 dDocent_Contig_8792 79 . A C 6595.5 . AB=0.724324;ABP=83.8712;AC=5;AF=0.416667;AN=12;AO=218;CIGAR=1X;DP=340;DPB=340;DPRA=1.86061;EPP=476.391;EPPR=267.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=58.8934;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.97541;PAO=0;PQA=0;PQR=0;PRO=0;QA=8374;QR=4669;RO=122;RPL=218;RPP=476.391;RPPR=267.93;RPR=0;RUN=1;SAF=218;SAP=476.391;SAR=0;SRF=122;SRP=267.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:30,2:30:1160:2:78:0,-2.22949,-97.2957 0/1:32:14,18:14:515:18:684:-52.2552,0,-31.4222 0/1:27:12,15:12:470:15:593:-45.5765,0,-34.5158 0/0:33:33,0:33:1269:0:0:0,-9.93399,-114.501 0/1:126:25,101:25:958:101:3876:-311.001,0,-48.6044 1/1:90:8,82:8:297:82:3143:-255.938,-0.0123983,0 dDocent_Contig_8793 7 . C T 1820.02 . AB=0.0397351;ABP=280.858;AC=0;AF=0;AN=12;AO=6;CIGAR=1X1M1X4M;DP=312;DPB=312;DPRA=0;EPP=16.0391;EPPR=378.675;GTI=0;LEN=1;MEANALT=5.66667;MQM=53.8333;MQMR=60;NS=6;NUMALT=7;ODDS=0;PAIRED=0.333333;PAIREDR=0.99422;PAO=0;PQA=0;PQR=0;PRO=0;QA=230;QR=6663;RO=173;RPL=0;RPP=16.0391;RPPR=378.675;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=173;SRP=378.675;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:53:36,0,1,4,2,0,9,0:36:1397:0,1,4,2,0,9,0:0,39,160,79,0,342,0:-17.2079,-28.045,-142.829,-24.9436,-139.728,-139.427,-14.859,-129.648,-126.546,-128.443,-21.7693,-136.554,-133.452,-123.372,-135.952,-28.045,-142.829,-139.728,-129.648,-136.554,-142.829,0,-114.784,-111.682,-101.602,-108.508,-114.784,-112.074,-28.045,-142.829,-139.728,-129.648,-136.554,-142.829,-114.784,-142.829 0|0:60:38,0,0,5,1,5,7,1:38:1467:0,0,5,1,5,7,1:0,0,192,36,195,266,40:-10.3808,-21.8199,-142.305,-21.8199,-142.305,-142.305,-6.05498,-126.544,-126.544,-125.039,-21.6863,-142.162,-142.162,-126.402,-141.861,-5.78621,-126.277,-126.277,-110.516,-126.134,-124.772,0,-120.491,-120.491,-104.73,-120.348,-104.462,-118.383,-18.5233,-139.01,-139.01,-123.249,-138.867,-122.981,-117.195,-138.709 0|0:32:19,0,0,0,3,0,10,0:19:700:0,0,0,3,0,10,0:0,0,0,113,0,388,0:-26.4201,-32.1397,-89.4084,-32.1397,-89.4084,-89.4084,-32.1397,-89.4084,-89.4084,-89.4084,-31.7712,-88.9924,-88.9924,-88.9924,-88.0893,-32.1397,-89.4084,-89.4084,-89.4084,-88.9924,-89.4084,0,-57.5088,-57.5088,-57.5088,-57.1057,-57.5088,-54.4985,-32.1397,-89.4084,-89.4084,-89.4084,-88.9924,-89.4084,-57.5088,-89.4084 0|0:69:33,0,0,0,0,0,32,2:33:1283:0,0,0,0,0,32,2:0,0,0,0,0,1194,76:-86.9883,-96.9222,-202.365,-96.9222,-202.365,-202.365,-96.9222,-202.365,-202.365,-202.365,-96.9222,-202.365,-202.365,-202.365,-202.365,-96.9222,-202.365,-202.365,-202.365,-202.365,-202.365,0,-105.438,-105.438,-105.438,-105.438,-105.438,-95.8052,-90.6888,-196.132,-196.132,-196.132,-196.132,-196.132,-99.2057,-195.53 0|0:44:19,0,4,6,2,1,8,4:19:727:0,4,6,2,1,8,4:0,153,223,80,40,290,155:-17.9463,-23.6659,-83.327,-11.1309,-70.7932,-69.5891,-5.4167,-65.0781,-52.5443,-63.2719,-17.6101,-77.2712,-64.7374,-59.0224,-76.6692,-20.3697,-80.0314,-67.4975,-61.7824,-73.9756,-79.7304,0,-59.6592,-47.1256,-41.4112,-53.6037,-56.3635,-57.2509,-10.9319,-70.5946,-58.0606,-52.3456,-64.5388,-67.2989,-46.9269,-69.3905 0|0:54:28,6,1,1,2,0,15,1:28:1089:6,1,1,2,0,15,1:222,38,40,79,0,532,41:-34.2804,-24.5407,-112.26,-39.6009,-110.959,-128.819,-39.4118,-110.771,-125.824,-128.63,-41.1711,-112.521,-127.573,-127.384,-130.078,-42.7092,-114.067,-129.12,-128.931,-130.68,-132.227,0,-71.3752,-86.4278,-86.239,-87.9918,-89.5348,-85.0194,-39.3224,-110.682,-125.735,-125.546,-127.295,-128.842,-86.1498,-128.541 dDocent_Contig_8794 66 . G T 169.1 . AB=0.158416;ABP=105.37;AC=2;AF=0.166667;AN=12;AO=18;CIGAR=1X;DP=294;DPB=294;DPRA=1.07042;EPP=42.0968;EPPR=602.337;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.539855;PAO=0;PQA=0;PQR=0;PRO=0;QA=623;QR=9481;RO=276;RPL=18;RPP=42.0968;RPPR=602.337;RPR=0;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=276;SRP=602.337;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:37,0:37:1261:0:0:0,-11.1381,-113.79 0/0:49:49,0:49:1701:0:0:0,-14.7505,-153.379 0/0:56:56,0:56:1947:0:0:0,-16.8577,-175.506 0/0:51:49,2:49:1666:2:69:0,-8.79987,-143.675 0/1:60:49,11:49:1670:11:381:-16.5619,0,-132.524 0/1:41:36,5:36:1236:5:173:-3.56798,0,-99.1996 dDocent_Contig_8795 20 . A C 213.209 . AB=0.135714;ABP=164.382;AC=5;AF=0.416667;AN=12;AO=19;CIGAR=10M1X1M;DP=204;DPB=200.25;DPRA=0.4375;EPP=44.2683;EPPR=383.018;GTI=0;LEN=1;MEANALT=1.8;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=761;QR=6828;RO=175;RPL=0;RPP=44.2683;RPPR=383.018;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=175;SRP=383.018;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:22:18,0,4:18:717:0,4:0,154:-7.60876,-13.0273,-72.0818,0,-59.4416,-58.2374 0|1:44:37,3,4:37:1428:3,4:99,163:-2.35328,-5.52091,-121.862,0,-109.316,-116.111 0|1:25:15,5,5:15:596:5,5:193,205:-12.4168,-1.09365,-48.6477,0,-33.2293,-47.5719 0|1:33:28,1,3:28:1100:1,3:38,122:-1.73418,-7.03649,-97.2653,0,-87.5009,-89.7142 0|0:64:64,0,0:64:2478:0,0:0,0:0,-19.2659,-223.197,-19.2659,-223.197,-223.197 0|1:16:13,0,3:13:509:0,3:0,117:-6.09281,-10.0062,-51.8579,0,-42.2416,-41.3385 dDocent_Contig_8796 50 . C T 174.949 . AB=0.195652;ABP=40.0197;AC=1;AF=0.1;AN=10;AO=15;CIGAR=1X;DP=425;DPB=425;DPRA=0.881603;EPP=35.5824;EPPR=893.314;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995122;PAO=0;PQA=0;PQR=0;PRO=0;QA=597;QR=16092;RO=410;RPL=15;RPP=35.5824;RPPR=893.314;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=410;SRP=893.314;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:180:175,5:175:6813:5:195:0,-36.265,-594.983 0/0:164:164,0:164:6485:0:0:0,-49.3689,-583.387 0/1:46:37,9:37:1479:9:362:-19.0968,0,-119.509 0/0:16:15,1:15:602:1:40:0,-0.820801,-50.5233 ./.:.:.:.:.:.:.:. 0/0:19:19,0:19:713:0:0:0,-5.71957,-64.4813 dDocent_Contig_8797 29 . C T 459.886 . AB=0.168675;ABP=161.292;AC=4;AF=0.333333;AN=12;AO=28;CIGAR=1X;DP=1084;DPB=1084;DPRA=0.0904139;EPP=63.8115;EPPR=2296.09;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993371;PAO=0;PQA=0;PQR=0;PRO=0;QA=1130;QR=41756;RO=1056;RPL=0;RPP=63.8115;RPPR=2296.09;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=1056;SRP=2296.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:74:62,12:62:2467:12:489:-22.0849,0,-199.893 0/1:21:14,7:14:556:7:277:-18.9761,0,-44.0574 0/1:18:15,3:15:585:3:118:-5.58397,0,-47.5643 0/1:53:47,6:47:1881:6:246:-6.56553,0,-153.537 0/0:518:518,0:518:20459:0:0:0,-155.934,-1839.68 0/0:400:400,0:400:15808:0:0:0,-120.412,-1421.54 dDocent_Contig_8798 146 . G A 631.687 . AB=0.44;ABP=4.57376;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X;DP=188;DPB=188;DPRA=0.724638;EPP=50.7827;EPPR=361.303;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.987879;PAO=0;PQA=0;PQR=0;PRO=0;QA=897;QR=6552;RO=165;RPL=0;RPP=50.7827;RPPR=361.303;RPR=22;RUN=1;SAF=0;SAP=50.7827;SAR=22;SRF=0;SRP=361.303;SRR=165;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1111:0:0:0,-8.42884,-100.276 0/0:51:50,0:50:1962:0:0:0,-15.0515,-176.542 0/0:31:31,0:31:1235:0:0:0,-9.33193,-111.416 0/0:28:28,0:28:1112:0:0:0,-8.42884,-100.359 0/1:9:4,5:4:160:5:204:-16.0348,0,-12.0743 0/1:41:24,17:24:972:17:693:-50.3558,0,-75.433 dDocent_Contig_8799 9 . A G 1983.54 . AB=0.290456;ABP=94.924;AC=7;AF=0.583334;AN=12;AO=70;CIGAR=2M1X;DP=241;DPB=241;DPRA=0;EPP=155.013;EPPR=291.816;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.214286;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2710;QR=5072;RO=133;RPL=0;RPP=155.013;RPPR=291.816;RPR=70;RUN=1;SAF=70;SAP=155.013;SAR=0;SRF=133;SRP=291.816;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:48:30,6,0,12:30:1147:6,0,12:230,0,462:-28.903,-19.0567,-111.367,-37.9339,-113.173,-132.051,0,-75.2396,-94.1176,-90.5052 0|1:28:15,1,0,12:15:557:1,0,12:38,0,468:-33.9643,-35.364,-80.6324,-38.4797,-80.9334,-84.05,0,-42.4546,-45.5717,-41.9593 1|1:21:1,9,0,11:1:39:9,0,11:336,0,428:-59.1699,-31.9685,-32.4652,-59.4709,-35.1745,-62.6772,-24.287,0,-27.4945,-24.1832 0|1:39:31,2,1,5:31:1181:2,1,5:76,37,191:-6.34262,-9.44152,-105.717,-12.649,-103.292,-109.224,0,-90.6476,-93.8539,-95.3754 0|1:49:24,5,0,19:24:918:5,0,19:182,0,739:-53.5238,-45.8895,-119.712,-60.7486,-121.217,-136.079,0,-60.4815,-75.3425,-69.6229 0|1:56:32,0,12,11:32:1230:0,12,11:0,455,422:-27.672,-37.305,-138.285,0,-100.979,-97.3666,-2.6662,-103.648,-66.3421,-100.337 dDocent_Contig_8800 16 . G T 5821.15 . AB=0.0731707;ABP=262.528;AC=0;AF=0;AN=12;AO=12;CIGAR=2X;DP=347;DPB=347;DPRA=0;EPP=29.068;EPPR=313.531;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=0.75;PAIREDR=0.622378;PAO=0;PQA=0;PQR=0;PRO=0;QA=486;QR=5459;RO=143;RPL=0;RPP=29.068;RPPR=313.531;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=143;SRP=313.531;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:51:14,0,37:14:536:0,37:0,1484:-118.453,-122.668,-166.648,0,-44.3678,-33.2297 0|0:79:44,0,35:44:1688:0,35:0,1415:-103.82,-117.065,-255.605,0,-138.935,-128.399 0|0:44:18,5,21:18:674:5,21:200,849:-64.5812,-53.5258,-107.202,0,-38.6952,-48.854 0|0:71:16,6,49:16:606:6,49:245,1977:-158.146,-142.746,-190.616,0,-29.4371,-34.9101 0|0:53:19,0,34:19:722:0,34:0,1348:-105.623,-111.342,-170.546,0,-59.589,-49.354 0|0:49:32,1,16:32:1233:1,16:41,636:-42.7141,-48.9622,-149.898,0,-97.8367,-96.405 dDocent_Contig_8801 45 . G A 445.126 . AB=0.240964;ABP=51.3844;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1X;DP=209;DPB=209;DPRA=0.992857;EPP=52.9542;EPPR=406.904;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.217391;PAIREDR=0.5;PAO=0;PQA=0;PQR=0;PRO=0;QA=914;QR=7371;RO=186;RPL=0;RPP=52.9542;RPPR=406.904;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=186;SRP=406.904;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:37,2:37:1466:2:73:0,-4.8101,-125.255 0/1:55:41,14:41:1619:14:557:-33.9151,0,-129.394 0/0:17:16,1:16:633:1:41:0,-1.02294,-53.2105 0/1:28:22,6:22:865:6:243:-13.8193,0,-69.727 0/0:23:23,0:23:920:0:0:0,-6.92369,-83.107 0/0:47:47,0:47:1868:0:0:0,-14.1484,-168.332 dDocent_Contig_8802 171 . A G 42.8819 . AB=0.142857;ABP=49.5419;AC=4;AF=0.333333;AN=12;AO=6;CIGAR=1X;DP=66;DPB=66;DPRA=0.875;EPP=16.0391;EPPR=133.299;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.983333;PAO=0;PQA=0;PQR=0;PRO=0;QA=243;QR=2161;RO=60;RPL=6;RPP=16.0391;RPPR=133.299;RPR=0;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=133.299;SRR=60;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:267:0:0:0,-2.10721,-24.3928 0/1:6:5,1:5:166:1:40:-2.1895,0,-13.4561 0/0:17:17,0:17:607:0:0:0,-5.11751,-54.9529 0/1:9:8,1:8:295:1:41:-1.3853,0,-24.1897 0/1:17:15,2:15:527:2:81:-2.56822,0,-42.6331 0/1:10:8,2:8:299:2:81:-4.67543,0,-24.2532 dDocent_Contig_8803 7 . C T 15203.2 . AB=0.569717;ABP=41.7656;AC=6;AF=0.5;AN=12;AO=523;CIGAR=1X;DP=918;DPB=918;DPRA=0;EPP=1121.39;EPPR=845.564;GTI=0;LEN=1;MEANALT=1.33333;MQM=59.8585;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.745698;PAIREDR=0.885204;PAO=0;PQA=0;PQR=0;PRO=0;QA=20079;QR=14935;RO=392;RPL=0;RPP=1138.69;RPPR=854.227;RPR=523;RUN=1;SAF=521;SAP=1121.39;SAR=2;SRF=391;SRP=845.564;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:115:80,35:80:3061:35:1330:-85.3637,0,-241.026 0/1:172:34,136:34:1251:136:5220:-418.29,0,-61.3593 0/1:75:15,60:15:556:60:2316:-185.965,0,-27.7946 0/1:146:41,104:41:1579:104:4009:-316.743,0,-98.3399 0/1:198:91,107:91:3451:107:4090:-308.584,0,-251.117 0/1:212:131,81:131:5037:81:3114:-216.598,0,-389.525 dDocent_Contig_8804 19 . G A 179.704 . AB=0.138614;ABP=117.582;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=345;DPB=345;DPRA=0.787565;EPP=37.7539;EPPR=715.253;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993902;PAO=0;PQA=0;PQR=0;PRO=0;QA=646;QR=12892;RO=328;RPL=0;RPP=37.7539;RPPR=715.253;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=328;SRP=715.253;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:85:84,0:84:3347:0:0:0,-25.2865,-300.886 0/1:75:67,8:67:2691:8:320:-6.58955,0,-219.729 0/1:26:20,6:20:781:6:245:-14.6027,0,-62.7782 0/0:51:49,2:49:1903:2:81:0,-7.6668,-163.777 0/0:58:58,0:58:2254:0:0:0,-17.4597,-203.031 0/0:50:50,0:50:1916:0:0:0,-15.0515,-172.634 dDocent_Contig_8805 106 . N A 56.9965 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=2X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=60;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:60:-5.69857,-0.60206,0 dDocent_Contig_8806 9 . A G 181.92 . AB=0.192308;ABP=45.7716;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=316;DPB=316;DPRA=0.548387;EPP=26.8965;EPPR=665.309;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=427;QR=11707;RO=305;RPL=0;RPP=26.8965;RPPR=665.309;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=305;SRP=665.309;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:96:96,0:96:3654:0:0:0,-28.8989,-328.975 0/0:83:83,0:83:3189:0:0:0,-24.9855,-287.162 0/0:63:63,0:63:2428:0:0:0,-18.9649,-218.724 0/1:52:42,10:42:1631:10:389:-19.7148,0,-131.398 0/0:6:6,0:6:223:0:0:0,-1.80618,-20.4262 0/0:16:15,1:15:582:1:38:0,-1.01921,-48.9258 dDocent_Contig_8807 17 . C T 1992.65 . AB=0.0945946;ABP=214.289;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1M1I5M1X1M;DP=283;DPB=244.125;DPRA=1.0963;EPP=33.4109;EPPR=443.819;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=483;QR=7925;RO=203;RPL=0;RPP=33.4109;RPPR=443.819;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=203;SRP=443.819;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:31:25,6,0:25:975:6,0:225,0:-11.2782,0,-78.7243,-18.8039,-80.5305,-98.9568 0|0:52:31,4,16:31:1205:4,16:105,631:-42.7067,-43.821,-141.641,0,-90.9262,-94.3361 0|0:65:12,4,49:12:456:4,49:153,1878:-150.502,-141.562,-177.748,0,-24.8361,-22.638 0|0:7:7,0,0:7:263:0,0:0,0:0,-2.10721,-24.0242,-2.10721,-24.0242,-24.0242 0|0:26:26,0,0:26:1028:0,0:0,0:0,-7.82678,-92.8202,-7.82678,-92.8202,-92.8202 0|0:102:102,0,0:102:3998:0,0:0,0:0,-30.7051,-359.858,-30.7051,-359.858,-359.858 dDocent_Contig_8808 71 . T G 867.522 . AB=0.262295;ABP=92.8238;AC=4;AF=0.333333;AN=12;AO=48;CIGAR=1X;DP=208;DPB=208;DPRA=3.66;EPP=107.241;EPPR=350.446;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1633;QR=4653;RO=160;RPL=48;RPP=107.241;RPPR=350.446;RPR=0;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=160;SRP=350.446;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:18:16,2:16:493:2:70:-1.22886,0,-39.2509 0/1:71:59,12:59:1692:12:390:-14.0384,0,-131.164 0/1:38:24,14:24:560:14:478:-31.9073,0,-39.1867 0/1:56:36,20:36:1153:20:695:-46.0162,0,-87.2043 0/0:11:11,0:11:350:0:0:0,-3.31133,-31.8094 0/0:14:14,0:14:405:0:0:0,-4.21442,-36.7318 dDocent_Contig_8809 31 . G A 157.035 . AB=0.28;ABP=13.5202;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=147;DPB=147;DPRA=1.02459;EPP=18.2106;EPPR=307.016;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992857;PAO=0;PQA=0;PQR=0;PRO=0;QA=271;QR=5557;RO=140;RPL=0;RPP=18.2106;RPPR=307.016;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=140;SRP=307.016;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:837:0:0:0,-6.32163,-75.6418 0/0:21:21,0:21:854:0:0:0,-6.32163,-77.1703 0/0:16:16,0:16:635:0:0:0,-4.81648,-57.4843 0/0:41:41,0:41:1629:0:0:0,-12.3422,-146.835 0/0:23:23,0:23:905:0:0:0,-6.92369,-81.7556 0/1:25:18,7:18:697:7:271:-17.2264,0,-55.5297 dDocent_Contig_8810 27 . T G 1573.63 . AB=0.0313972;ABP=1217.97;AC=0;AF=0;AN=12;AO=20;CIGAR=1X2M1X2M;DP=637;DPB=637;DPRA=0;EPP=46.4397;EPPR=1017.09;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.8;PAIREDR=0.648822;PAO=0;PQA=0;PQR=0;PRO=0;QA=787;QR=18037;RO=467;RPL=0;RPP=46.4397;RPPR=1017.09;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=467;SRP=1017.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:120:91,6,5,17:91:3515:6,5,17:237,193,650:-25.9313,-33.8198,-320.683,-37.4758,-306.64,-324.638,0,-269.161,-272.815,-283.546 0|0:101:71,6,8,16:71:2724:6,8,16:235,320,614:-29.0116,-31.0602,-252.823,-24.0217,-228.268,-245.184,0,-204.238,-197.201,-218.746 0|0:83:62,1,8,12:62:2439:1,8,12:39,323,470:-19.9758,-35.434,-235.763,-12.0076,-209.435,-210.233,0,-197.419,-173.996,-197.012 0|0:107:79,4,13,11:79:3030:4,13,11:157,520,438:-19.0541,-29.924,-277.382,0,-235.75,-244.75,-6.76876,-242.518,-212.595,-252.119 0|0:111:82,1,17,8:82:3156:1,17,8:39,677,282:-31.0803,-52.5587,-311.362,0,-255.914,-254.003,-32.8301,-288.718,-236.176,-289.516 0|0:115:82,2,21,9:82:3173:2,21,9:80,829,342:-43.5318,-61.6258,-321.639,0,-254.029,-254.298,-40.178,-294.2,-232.578,-298.08 dDocent_Contig_8811 20 . T C 881.619 . AB=0.210784;ABP=151.224;AC=4;AF=0.333333;AN=12;AO=45;CIGAR=1X;DP=302;DPB=302;DPRA=1.11304;EPP=100.727;EPPR=561.079;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.288889;PAIREDR=0.478599;PAO=0;PQA=0;PQR=0;PRO=0;QA=1806;QR=10289;RO=257;RPL=0;RPP=100.727;RPPR=561.079;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=257;SRP=561.079;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:47:37,10:37:1459:10:387:-21.0241,0,-117.404 0/1:77:60,17:60:2407:17:686:-38.8879,0,-193.599 0/1:43:39,4:39:1554:4:164:-2.20561,0,-127.152 0/1:37:25,12:25:1000:12:489:-33.2232,0,-79.1591 0/0:46:46,0:46:1839:0:0:0,-13.8474,-165.702 0/0:52:50,2:50:2030:2:80:0,-8.06198,-175.288 dDocent_Contig_8812 10 . C T 9497.61 . AB=0.0514706;ABP=240.659;AC=6;AF=0.5;AN=12;AO=7;CIGAR=1X1M2X;DP=404;DPB=404;DPRA=0;EPP=18.2106;EPPR=202.786;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.98913;PAO=0;PQA=0;PQR=0;PRO=0;QA=275;QR=3578;RO=92;RPL=0;RPP=18.2106;RPPR=202.786;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=92;SRP=202.786;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:69:13,56,0:13:500:56,0:2212,0:-178.496,0,-24.5762,-182.409,-41.4339,-223.457 0|1:75:9,66,0:9:351:66,0:2612,0:-212.651,0,-9.37388,-215.361,-29.2419,-244.212 0|1:45:8,35,2:8:310:35,2:1395,76:-112.485,0,-14.9368,-108.662,-19.2425,-133.525 0|1:58:10,48,0:10:399:48,0:1906,0:-154.289,0,-18.8104,-157.3,-33.2598,-190.161 0|1:91:32,53,5:32:1244:53,5:2097,199:-162.945,0,-86.2646,-156.193,-85.8327,-256.908 0|1:66:20,46,0:20:774:46,0:1775,0:-140.116,0,-50.1149,-146.136,-63.9623,-209.712 dDocent_Contig_8813 1 . N G 75.9287 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=80;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:80:-7.59179,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_8814 133 . C A 1540.72 . AB=0.23913;ABP=166.154;AC=7;AF=0.583333;AN=12;AO=75;CIGAR=1X1M1X4M;DP=285;DPB=285;DPRA=0;EPP=27.3597;EPPR=443.819;GTI=0;LEN=1;MEANALT=1.83333;MQM=58.4;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=0.16;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2706;QR=6734;RO=203;RPL=0;RPP=165.871;RPPR=443.819;RPR=75;RUN=1;SAF=52;SAP=27.3597;SAR=23;SRF=0;SRP=443.819;SRR=203;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:76:64,0,11:64:2143:0,11:0,399:-13.4607,-32.7266,-206.258,0,-173.722,-170.411 0|1:46:28,0,16:28:951:0,16:0,582:-39.2405,-47.6693,-124.797,0,-77.2532,-72.4367 0|1:38:24,2,12:24:819:2,12:73,429:-27.7186,-28.978,-94.826,0,-60.4728,-62.8265 0|1:64:51,0,11:51:1654:0,11:0,399:-17.2449,-32.5974,-166.031,0,-133.446,-130.135 1|1:9:0,0,9:0:0:0,9:0,324:-29.4379,-29.4379,-29.4379,-2.70927,-2.70927,0 0|1:52:36,0,16:36:1167:0,16:0,573:-36.1908,-47.0279,-141.164,0,-94.4832,-89.6667 dDocent_Contig_8815 27 . A C 958.024 . AB=0.277372;ABP=61.9888;AC=1;AF=0.0833333;AN=12;AO=53;CIGAR=1X;DP=577;DPB=577;DPRA=1.14857;EPP=118.098;EPPR=1136.52;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2115;QR=20915;RO=522;RPL=0;RPP=118.098;RPPR=1136.52;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=522;SRP=1136.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:63:60,2:60:2405:2:82:0,-11.2936,-208.822 0/0:108:108,0:108:4339:0:0:0,-32.5112,-390.448 0/0:67:67,0:67:2679:0:0:0,-20.169,-241.238 0/0:83:77,5:77:3088:5:196:0,-7.04395,-259.984 0/1:137:99,38:99:3955:38:1537:-97.3253,0,-314.697 0/0:119:111,8:111:4449:8:300:0,-8.47881,-373.003 dDocent_Contig_8816 9 . A G 45.7781 . AB=0.108696;ABP=125.368;AC=3;AF=0.25;AN=12;AO=16;CIGAR=1X;DP=227;DPB=227;DPRA=1.48148;EPP=37.7539;EPPR=461.191;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995261;PAO=0;PQA=0;PQR=0;PRO=0;QA=611;QR=8078;RO=211;RPL=0;RPP=37.7539;RPPR=461.191;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=211;SRP=461.191;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:20,2:20:756:2:77:-0.686482,0,-61.7426 0/0:36:34,2:34:1308:2:77:0,-3.52794,-110.699 0/1:16:13,3:13:503:3:117:-6.0939,0,-40.8023 0/0:27:27,0:27:1038:0:0:0,-8.12781,-93.7281 0/0:72:68,4:68:2629:4:156:0,-7.25687,-222.381 0/1:54:49,5:49:1844:5:184:-0.660069,0,-149.953 dDocent_Contig_8817 1 . N G 66.4848 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=70;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_8818 37 . T A 18443.2 . AB=0.184874;ABP=105.653;AC=5;AF=0.416666;AN=12;AO=23;CIGAR=5M1X;DP=2572;DPB=2454.17;DPRA=0;EPP=52.9542;EPPR=3902.97;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=59.9961;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=913;QR=70566;RO=1796;RPL=0;RPP=52.9542;RPPR=3902.97;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=1796;SRP=3902.97;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:610:418,169,0:418:16388:169,0:6621,0:-418.58,0,-1296.72,-544.41,-1347.6,-1892.01 0|1:715:358,348,0:358:14051:348,0:13726,0:-1021.57,0,-1050.82,-1129.34,-1155.58,-2284.88 0|1:479:400,66,0:400:15717:66,0:2588,0:-92.4057,0,-1272.81,-212.818,-1292.68,-1505.49 0|1:453:337,116,0:337:13248:116,0:4598,0:-277.402,0,-1055.13,-378.85,-1090.05,-1468.5 0|1:119:95,0,22:95:3735:0,22:0,875:-43.584,-72.1819,-379.4,0,-307.361,-300.738 0|0:196:188,6,1:188:7427:6,1:237,38:0,-36.9977,-646.458,-53.4748,-645.148,-664.349 dDocent_Contig_8819 53 . A G 16006.5 . AB=0.355102;ABP=315.764;AC=4;AF=0.333333;AN=12;AO=612;CIGAR=1X;DP=1907;DPB=1907;DPRA=8.88095;EPP=1331.95;EPPR=2810.72;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=23727;QR=50592;RO=1293;RPL=612;RPP=1331.95;RPPR=2810.72;RPR=0;RUN=1;SAF=612;SAP=1331.95;SAR=0;SRF=1293;SRP=2810.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:353:265,88:265:10305:88:3342:-194.577,0,-820.614 0/1:546:329,217:329:12938:217:8442:-594.994,0,-999.186 0/1:281:174,107:174:6775:107:4224:-295.547,0,-524.91 0/1:535:337,197:337:13207:197:7599:-522.756,0,-1026.94 0/0:150:146,3:146:5709:3:120:0,-34.0503,-502.481 0/0:42:42,0:42:1658:0:0:0,-12.6433,-149.458 dDocent_Contig_8820 98 . N A 225.861 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=240;QR=0;RO=0;RPL=7;RPP=18.2106;RPPR=0;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:6:0,6:0:0:6:205:-18.7853,-1.80618,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_8821 13 . G T 5058.2 . AB=0.317742;ABP=181.898;AC=4;AF=0.333333;AN=12;AO=197;CIGAR=1X;DP=762;DPB=762;DPRA=2.1831;EPP=430.79;EPPR=1227.72;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998227;PAO=0;PQA=0;PQR=0;PRO=0;QA=7765;QR=22318;RO=564;RPL=0;RPP=430.79;RPPR=1227.72;RPR=197;RUN=1;SAF=197;SAP=430.79;SAR=0;SRF=564;SRP=1227.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:172:111,61:111:4335:61:2407:-165.016,0,-338.355 0/1:188:125,63:125:4976:63:2468:-165.683,0,-391.141 0/1:159:124,35:124:4908:35:1392:-77.6753,0,-393.772 0/1:101:63,38:63:2491:38:1498:-104.667,0,-193.938 0/0:63:62,0:62:2476:0:0:0,-18.6639,-222.589 0/0:79:79,0:79:3132:0:0:0,-23.7814,-281.97 dDocent_Contig_8822 23 . A T 416.189 . AB=0.189655;ABP=100.053;AC=3;AF=0.25;AN=12;AO=25;CIGAR=1X;DP=218;DPB=218;DPRA=1.20312;EPP=57.2971;EPPR=422.104;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.6;PAIREDR=0.512953;PAO=0;PQA=0;PQR=0;PRO=0;QA=999;QR=7681;RO=193;RPL=0;RPP=57.2971;RPPR=422.104;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=193;SRP=422.104;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:30,12:30:1185:12:488:-31.6282,0,-94.2799 0/0:34:34,0:34:1356:0:0:0,-10.235,-122.301 0/0:38:35,3:35:1380:3:103:0,-1.83192,-114.854 0/0:30:30,0:30:1194:0:0:0,-9.0309,-107.736 0/1:44:38,6:38:1525:6:244:-9.0935,0,-124.246 0/1:30:26,4:26:1041:4:164:-6.119,0,-84.9493 dDocent_Contig_8823 14 . A T 1308.05 . AB=0.238866;ABP=149.308;AC=3;AF=0.25;AN=12;AO=63;CIGAR=1X;DP=541;DPB=541;DPRA=0.729545;EPP=139.813;EPPR=1040.97;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.991632;PAO=0;PQA=0;PQR=0;PRO=0;QA=2485;QR=18816;RO=478;RPL=0;RPP=139.813;RPPR=1040.97;RPR=63;RUN=1;SAF=63;SAP=139.813;SAR=0;SRF=478;SRP=1040.97;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:69:47,22:47:1853:22:874:-58.1976,0,-146.215 0/1:86:65,21:65:2582:21:832:-49.3044,0,-206.634 0/1:92:76,16:76:3041:16:621:-28.5251,0,-246.081 0/0:74:70,4:70:2737:4:158:0,-7.67595,-231.871 0/0:128:128,0:128:4969:0:0:0,-38.5318,-447.158 0/0:92:92,0:92:3634:0:0:0,-27.6948,-327.118 dDocent_Contig_8824 22 . T G 743.192 . AB=0.197044;ABP=164.844;AC=4;AF=0.333333;AN=12;AO=47;CIGAR=1X;DP=280;DPB=280;DPRA=0;EPP=105.07;EPPR=508.963;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.659574;PAIREDR=0.459227;PAO=0;PQA=0;PQR=0;PRO=0;QA=1805;QR=8829;RO=233;RPL=0;RPP=105.07;RPPR=508.963;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=233;SRP=508.963;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:25,2:25:914:2:76:0,-0.913553,-75.3423 0/1:71:61,10:61:2326:10:394:-14.4459,0,-188.166 0/1:43:28,15:28:1076:15:585:-40.0434,0,-84.1945 0/1:50:39,11:39:1438:11:429:-23.911,0,-114.628 0/1:39:35,4:35:1347:4:161:-3.1351,0,-109.763 0/0:50:45,5:45:1728:5:160:0,-0.338863,-141.048 dDocent_Contig_8825 28 . A T 536.027 . AB=0.37037;ABP=10.8919;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=262;DPB=262;DPRA=0.519231;EPP=46.4397;EPPR=528.507;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=804;QR=9439;RO=242;RPL=0;RPP=46.4397;RPPR=528.507;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=242;SRP=528.507;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:50,0:50:1952:0:0:0,-15.0515,-175.879 0/0:53:53,0:53:2074:0:0:0,-15.9546,-186.85 0/0:85:85,0:85:3303:0:0:0,-25.5875,-297.349 0/0:20:20,0:20:803:0:0:0,-6.0206,-72.5872 0/1:18:10,8:10:376:8:326:-24.2913,0,-28.7642 0/1:36:24,12:24:931:12:478:-32.5332,0,-73.2517 dDocent_Contig_8826 26 . C A 78.347 . AB=0.428571;ABP=3.32051;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=261;DPB=261;DPRA=0.137795;EPP=9.52472;EPPR=563.25;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996124;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=10336;RO=258;RPL=0;RPP=9.52472;RPPR=563.25;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=258;SRP=563.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:45:45,0:45:1816:0:0:0,-13.5463,-163.645 0/0:79:79,0:79:3152:0:0:0,-23.7814,-283.752 0/0:52:52,0:52:2084:0:0:0,-15.6536,-187.736 0/0:49:49,0:49:1965:0:0:0,-14.7505,-177.045 0/0:29:29,0:29:1163:0:0:0,-8.72987,-104.949 0/1:7:4,3:4:156:3:123:-9.35758,0,-12.3092 dDocent_Contig_8827 136 . T A 67.6632 . AB=0.266667;ABP=10.1038;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=155;DPB=155;DPRA=1.14783;EPP=26.8965;EPPR=311.359;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=354;QR=4796;RO=142;RPL=0;RPP=26.8965;RPPR=311.359;RPR=11;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=311.359;SRR=142;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:13:12,1:12:420:1:35:0,-0.414761,-34.6364 0/0:31:29,1:29:976:1:36:0,-5.78747,-84.5517 0/0:43:39,4:39:1299:4:122:0,-1.66311,-105.922 0/0:30:29,1:29:967:1:22:0,-6.83097,-85.1347 0/0:23:23,0:23:782:0:0:0,-6.92369,-70.6935 0/1:15:10,4:10:352:4:139:-8.2889,0,-27.4544 dDocent_Contig_8829 44 . C A 180.551 . AB=0.109091;ABP=295.014;AC=1;AF=0.0833333;AN=12;AO=33;CIGAR=1X;DP=1216;DPB=1216;DPRA=1.99099;EPP=66.2462;EPPR=1357.44;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.989011;PAO=0;PQA=0;PQR=0;PRO=0;QA=1217;QR=45978;RO=1183;RPL=1;RPP=66.2462;RPPR=1357.44;RPR=32;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=1183;SRP=2571.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:208:207,1:207:8073:1:8:0,-61.8142,-725.399 0/0:265:264,1:264:10294:1:9:0,-78.8729,-925.008 0/0:111:111,0:111:4357:0:0:0,-33.4143,-392.122 0/0:207:206,1:206:7968:1:9:0,-61.4132,-715.873 0/1:220:196,24:196:7691:24:950:-19.578,0,-625.634 0/0:205:199,6:199:7595:6:241:0,-39.6448,-661.18 dDocent_Contig_8830 18 . T A 111.386 . AB=0.222222;ABP=21.1059;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=264;DPB=264;DPRA=0.966292;EPP=18.2106;EPPR=561.079;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.92607;PAO=0;PQA=0;PQR=0;PRO=0;QA=267;QR=10219;RO=257;RPL=0;RPP=18.2106;RPPR=561.079;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=257;SRP=561.079;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:50,0:50:1985:0:0:0,-15.0515,-178.833 0/0:50:50,0:50:1991:0:0:0,-15.0515,-179.386 0/0:28:28,0:28:1113:0:0:0,-8.42884,-100.455 0/1:27:21,6:21:846:6:227:-12.6615,0,-68.3243 0/0:59:58,1:58:2271:1:40:0,-13.7651,-200.559 0/0:50:50,0:50:2013:0:0:0,-15.0515,-181.355 dDocent_Contig_8831 20 . C T 32.9378 . AB=0.105263;ABP=80.1547;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=313;DPB=313;DPRA=1.11328;EPP=16.0391;EPPR=669.652;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.990228;PAO=0;PQA=0;PQR=0;PRO=0;QA=240;QR=12291;RO=307;RPL=0;RPP=16.0391;RPPR=669.652;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=307;SRP=669.652;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1631:0:0:0,-12.3422,-147.018 0/1:57:51,6:51:2044:6:240:-4.81644,0,-166.99 0/0:37:37,0:37:1492:0:0:0,-11.1381,-134.519 0/0:50:50,0:50:2018:0:0:0,-15.0515,-181.804 0/0:81:81,0:81:3212:0:0:0,-24.3834,-289.136 0/0:47:47,0:47:1894:0:0:0,-14.1484,-170.659 dDocent_Contig_8832 28 . T A 97.5754 . AB=0.120482;ABP=106.849;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=1X;DP=582;DPB=582;DPRA=0;EPP=57.2971;EPPR=1206.01;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=965;QR=20897;RO=554;RPL=0;RPP=57.2971;RPPR=1206.01;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=554;SRP=1206.01;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:88:87,1:87:3297:1:40:0,-22.495,-292.852 0/0:128:122,6:122:4650:6:204:0,-19.8484,-399.839 0/0:60:57,3:57:2118:3:123:0,-6.59701,-179.366 0/0:112:106,3:106:3982:3:117:0,-22.295,-347.53 0/0:111:109,2:109:4159:2:82:0,-25.6347,-366.58 0/1:83:73,10:73:2691:10:399:-11.2804,0,-217.375 dDocent_Contig_8833 44 . G A 603.355 . AB=0.191919;ABP=166.244;AC=4;AF=0.333333;AN=12;AO=41;CIGAR=1X;DP=310;DPB=310;DPRA=0;EPP=83.5666;EPPR=587.136;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.585366;PAIREDR=0.6171;PAO=0;PQA=0;PQR=0;PRO=0;QA=1506;QR=10572;RO=269;RPL=1;RPP=83.5666;RPPR=587.136;RPR=40;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=269;SRP=587.136;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:48:40,8:40:1596:8:273:-10.4407,0,-129.429 0/1:66:54,12:54:2107:12:478:-23.5024,0,-169.955 0/0:53:52,1:52:2031:1:35:0,-12.456,-179.483 0/0:59:57,2:57:2231:2:73:0,-10.8316,-194.042 0/1:44:31,13:31:1220:13:463:-28.7439,0,-96.8316 0/1:40:35,5:35:1387:5:184:-4.87022,0,-113.046 dDocent_Contig_8834 56 . T C 470.444 . AB=0.278351;ABP=44.4026;AC=5;AF=0.416667;AN=12;AO=27;CIGAR=1X;DP=110;DPB=110;DPRA=1.49231;EPP=26.2531;EPPR=183.243;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.53012;PAO=0;PQA=0;PQR=0;PRO=0;QA=931;QR=3317;RO=83;RPL=9;RPP=9.52472;RPPR=183.243;RPR=18;RUN=1;SAF=23;SAP=32.0437;SAR=4;SRF=83;SRP=183.243;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:14:10,4:10:406:4:132:-7.99226,0,-32.6856 0/1:26:22,4:22:855:4:140:-5.11568,0,-69.4295 0/1:18:13,5:13:522:5:173:-10.49,0,-41.9067 0/0:13:13,0:13:523:0:0:0,-3.91339,-47.4177 0/1:10:8,2:8:326:2:68:-3.44763,0,-26.6996 0/1:29:17,12:17:685:12:418:-29.218,0,-53.2507 dDocent_Contig_8835 108 . A G 1414.41 . AB=0.390244;ABP=20.1702;AC=4;AF=0.4;AN=10;AO=64;CIGAR=1X;DP=186;DPB=186;DPRA=1.86364;EPP=141.985;EPPR=267.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2187;QR=4327;RO=122;RPL=0;RPP=141.985;RPPR=267.93;RPR=64;RUN=1;SAF=0;SAP=141.985;SAR=64;SRF=0;SRP=267.93;SRR=122;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:55:33,22:33:1152:22:749:-51.1678,0,-87.4269 0/1:57:39,18:39:1395:18:635:-40.3198,0,-108.691 0/1:23:13,10:13:467:10:317:-21.9137,0,-35.4455 0/1:29:15,14:15:532:14:486:-35.3404,0,-39.4833 ./.:.:.:.:.:.:.:. 0/0:22:22,0:22:781:0:0:0,-6.62266,-70.6131 dDocent_Contig_8836 14 . A G 738.28 . AB=0.151786;ABP=356.883;AC=5;AF=0.416667;AN=12;AO=56;CIGAR=1X;DP=404;DPB=404;DPRA=0;EPP=124.613;EPPR=758.683;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9885;NS=6;NUMALT=1;ODDS=0;PAIRED=0.392857;PAIREDR=0.853448;PAO=0;PQA=0;PQR=0;PRO=0;QA=2229;QR=13883;RO=348;RPL=0;RPP=124.613;RPPR=758.683;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=348;SRP=758.683;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:60:50,10:50:1999:10:395:-17.845,0,-162.042 0/1:71:62,9:62:2481:9:366:-11.9318,0,-202.065 0/1:64:51,13:51:2045:13:524:-28.2414,0,-164.967 0/1:79:68,11:68:2686:11:448:-16.8946,0,-218.086 0/0:68:63,5:63:2499:5:202:0,-1.90796,-206.499 0/1:62:54,8:54:2173:8:294:-8.13712,0,-177.079 dDocent_Contig_8837 14 . A G 4621.27 . AB=0.252218;ABP=423.767;AC=6;AF=0.5;AN=12;AO=199;CIGAR=1X;DP=789;DPB=789;DPRA=0;EPP=435.133;EPPR=1284.18;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998305;PAO=0;PQA=0;PQR=0;PRO=0;QA=7881;QR=23542;RO=590;RPL=0;RPP=435.133;RPPR=1284.18;RPR=199;RUN=1;SAF=199;SAP=435.133;SAR=0;SRF=590;SRP=1284.18;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:92:57,35:57:2295:35:1405:-99.0109,0,-179.013 0/1:146:116,30:116:4663:30:1205:-64.7752,0,-375.627 0/1:81:50,31:50:2016:31:1257:-89.0113,0,-157.241 0/1:126:96,30:96:3832:30:1148:-65.6696,0,-306.957 0/1:180:151,29:151:5962:29:1121:-46.9803,0,-482.201 0/1:164:120,44:120:4774:44:1745:-107.901,0,-380.2 dDocent_Contig_8838 71 . A G 176.363 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=57;MQMR=0;NS=1;NUMALT=1;ODDS=8.07091;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=192;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:192:-17.6362,-1.50515,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_8839 98 . N T 1539.24 . AB=0.418605;ABP=5.48477;AC=12;AF=1;AN=12;AO=61;CIGAR=2X;DP=121;DPB=189;DPRA=0;EPP=135.47;EPPR=0;GTI=0;LEN=1;MEANALT=2.33333;MQM=28.3279;MQMR=0;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=0.131148;PAIREDR=0;PAO=23;PQA=765;PQR=0;PRO=0;QA=2248;QR=0;RO=0;RPL=61;RPP=135.47;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=135.47;SAR=61;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:7:0,0,5:0:0:0,5:0,180:-7.66596,-7.66596,-7.66596,-1.50515,-1.50515,0 1|1:37:0,0,18:0:0:0,18:0,667:-42.3573,-42.3573,-42.3573,-5.41854,-5.41854,0 1|1:20:0,0,10:0:0:0,10:0,365:-24.9104,-24.9104,-24.9104,-3.0103,-3.0103,0 1|1:14:0,0,10:0:0:0,10:0,370:-20.445,-20.445,-20.445,-3.0103,-3.0103,0 1|1:28:0,5,12:0:0:5,12:183,443:-44.8793,-29.9043,-28.3991,-15.0068,0,-11.3945 1|1:15:0,1,6:0:0:1,6:35,223:-15.2383,-13.0869,-12.7859,-2.15804,0,-0.351861 dDocent_Contig_8840 8 . A G 98.2148 . AB=0.162791;ABP=45.4803;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=302;DPB=302;DPRA=1;EPP=24.725;EPPR=637.08;GTI=0;LEN=1;MEANALT=1;MQM=59.3;MQMR=59.8219;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.787671;PAO=0;PQA=0;PQR=0;PRO=0;QA=380;QR=11134;RO=292;RPL=0;RPP=24.725;RPPR=637.08;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=292;SRP=637.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1072:0:0:0,-8.42884,-96.7857 0/0:72:72,0:72:2759:0:0:0,-21.6742,-248.496 0/1:43:36,7:36:1365:7:266:-11.3444,0,-110.189 0/0:51:51,0:51:1936:0:0:0,-15.3525,-174.485 0/0:59:57,2:57:2169:2:75:0,-10.6407,-188.312 0/0:49:48,1:48:1833:1:39:0,-10.8539,-160.45 dDocent_Contig_8841 19 . G A 111.533 . AB=0.5;ABP=3.0103;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=223;DPB=223;DPRA=0.186047;EPP=11.6962;EPPR=478.563;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=160;QR=8702;RO=219;RPL=0;RPP=11.6962;RPPR=478.563;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=219;SRP=478.563;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:8:4,4:4:162:4:160:-12.3752,0,-12.5585 0/0:12:12,0:12:458:0:0:0,-3.61236,-41.5586 0/0:37:37,0:37:1463:0:0:0,-11.1381,-131.907 0/0:14:14,0:14:550:0:0:0,-4.21442,-49.8404 0/0:100:100,0:100:4015:0:0:0,-30.103,-361.327 0/0:52:52,0:52:2054:0:0:0,-15.6536,-185.048 dDocent_Contig_8842 7 . C T 18132.9 . AB=0.068903;ABP=1783.5;AC=6;AF=0.5;AN=12;AO=76;CIGAR=3X8M;DP=1103;DPB=1103;DPRA=0;EPP=168.042;EPPR=239.701;GTI=0;LEN=1;MEANALT=8.66667;MQM=60;MQMR=60;NS=6;NUMALT=6;ODDS=2.22045e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2877;QR=4218;RO=109;RPL=0;RPP=168.042;RPPR=239.701;RPR=76;RUN=1;SAF=76;SAP=168.042;SAR=0;SRF=109;SRP=239.701;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:153:5,0,3,44,8,62,19:5:195:0,3,44,8,62,19:0,114,1673,296,2355,757:-312.802,-314.308,-330.337,-305.146,-321.175,-320.272,-177.094,-193.124,-183.962,-179.879,-290.095,-306.125,-296.963,-168.912,-303.717,-121.183,-137.212,-128.051,0,-113,-118.548,-251.972,-268.001,-258.839,-130.787,-243.789,-74.8744,-262.282 1|0:260:14,0,10,60,23,120,29:14:547:0,10,60,23,120,29:0,390,2280,872,4544,1154:-510.307,-514.522,-559.493,-483.635,-528.606,-525.595,-327.541,-372.513,-341.625,-354.451,-443.024,-487.995,-457.108,-301.015,-481.071,-142.006,-186.978,-156.091,0,-115.48,-150.854,-419.512,-464.483,-433.596,-277.502,-392.985,-91.966,-455.753 1|0:154:18,0,7,36,9,62,20:18:706:0,7,36,9,62,20:0,275,1382,342,2351,801:-242.723,-248.142,-306.202,-226.27,-284.33,-282.223,-134.697,-192.758,-170.886,-181.921,-220.095,-278.155,-256.283,-164.711,-275.446,-55.3817,-113.442,-91.5706,0,-85.3958,-94.7782,-182.151,-240.212,-218.34,-126.767,-212.165,-47.4511,-234.192 1|0:218:26,0,3,47,21,84,24:26:990:0,3,47,21,84,24:0,118,1805,796,3173,940:-319.148,-326.975,-408.175,-317.604,-398.804,-397.901,-178.857,-260.057,-250.686,-245.909,-261.71,-342.91,-333.539,-194.792,-336.588,-66.9177,-148.117,-138.746,0,-82.8531,-122.831,-249.693,-330.893,-321.522,-182.775,-265.628,-70.8351,-323.668 1|0:155:24,10,6,69,8,25,5:24:921:10,6,69,8,25,5:372,234,2599,300,943,203:-207.376,-184.154,-256.74,-195.471,-240.621,-269.261,-1.63504,-46.7861,-58.1019,-56.4605,-190.027,-235.178,-246.494,-52.6589,-263.216,-137.368,-182.518,-193.834,0,-188.391,-205.438,-197.857,-243.007,-254.324,-60.4877,-248.88,-196.221,-271.948 1|0:163:22,4,12,62,7,37,17:22:859:4,12,62,7,37,17:154,457,2350,271,1424,683:-232.153,-226.131,-295.544,-201.786,-259.759,-268.791,-46.1394,-104.112,-79.7679,-98.0928,-216.513,-274.486,-250.141,-94.4944,-285.023,-122.017,-179.99,-155.645,0,-170.372,-181.496,-182.491,-240.464,-216.119,-60.4713,-230.846,-136.349,-247.991 dDocent_Contig_8843 52 . T G 11828.4 . AB=0.61859;ABP=79.2345;AC=4;AF=0.333333;AN=12;AO=386;CIGAR=1X;DP=657;DPB=657;DPRA=9.45455;EPP=841.199;EPPR=591.479;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.984456;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=15310;QR=10829;RO=271;RPL=386;RPP=841.199;RPPR=591.479;RPR=0;RUN=1;SAF=386;SAP=841.199;SAR=0;SRF=271;SRP=591.479;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:171:67,104:67:2694:104:4141:-321.178,0,-191.086 0/1:140:67,73:67:2666:73:2923:-221.019,0,-197.908 0/1:110:26,84:26:1029:84:3301:-264.032,0,-59.7867 0/1:203:78,125:78:3130:125:4945:-383.828,0,-220.662 0/0:25:25,0:25:986:0:0:0,-7.52575,-89.0375 0/0:8:8,0:8:324:0:0:0,-2.40824,-29.5294 dDocent_Contig_8844 7 . C T 8879.28 . AB=0.0696629;ABP=718.811;AC=3;AF=0.25;AN=12;AO=31;CIGAR=3X11M;DP=1186;DPB=1186.43;DPRA=0;EPP=70.3259;EPPR=254.901;GTI=0;LEN=1;MEANALT=22;MQM=60;MQMR=60;NS=6;NUMALT=7;ODDS=4.44089e-16;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1181;QR=4379;RO=116;RPL=0;RPP=70.3259;RPPR=254.901;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=116;SRP=254.901;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:197:21,9,56,38,2,7,15,0:21:798:9,56,38,2,7,15,0:342,1931,1345,77,272,560,0:-185.122,-163.396,-226.136,-38.6256,-76.0288,-87.2191,-87.3642,-124.767,0,-141.376,-185.121,-222.523,-97.7541,-146.492,-249.968,-169.09,-206.493,-81.7234,-130.462,-228.217,-232.433,-145.592,-182.995,-58.2257,-106.964,-204.72,-188.69,-206.527,-191.443,-228.846,-104.077,-152.815,-250.57,-234.54,-211.043,-256.893 1|0:260:24,23,73,29,14,11,26,10:24:900:23,73,29,14,11,26,10:872,2568,993,534,429,989,379:-202.401,-138.127,-204.924,-7.3983,-9.6197,-59.1432,-133.987,-136.209,-5.48276,-198.977,-165.817,-168.039,-37.3098,-163.899,-235.323,-174.36,-176.582,-45.8527,-172.442,-204.272,-244.769,-128.507,-130.729,0,-126.589,-158.419,-166.962,-194.401,-178.55,-180.772,-50.0429,-176.632,-208.462,-217.005,-171.152,-249.26 1|0:185:17,10,27,36,6,13,15,21:17:642:10,27,36,6,13,15,21:361,931,1132,233,497,575,802:-98.8368,-74.4912,-124.104,-31.0338,-54.1938,-75.5287,-20.295,-43.4545,0,-62.0794,-84.8075,-107.967,-64.5098,-53.7701,-135.624,-63.1717,-86.3316,-42.8742,-32.135,-96.6478,-111.881,-56.7566,-79.9166,-36.4591,-25.7201,-90.2328,-68.5971,-104.864,-38.1468,-61.307,-17.8495,-7.11091,-71.6232,-49.9873,-43.5722,-84.4485 0|0:163:12,16,26,42,1,4,24,0:12:452:16,26,42,1,4,24,0:609,787,1378,39,154,899,0:-136.513,-90.1688,-122.395,-81.9769,-69.0632,-111.192,-36.5899,-23.6759,-15.4904,-60.9891,-136.919,-124.005,-115.813,-70.4261,-173.66,-127.481,-114.568,-106.375,-60.9883,-161.317,-163.319,-66.4926,-53.5783,-45.3877,0,-100.33,-90.8916,-96.3112,-140.125,-127.212,-119.019,-73.6323,-173.961,-164.524,-103.536,-177.167 0|0:165:13,11,34,35,4,2,26,0:13:487:11,34,35,4,2,26,0:407,1010,1158,154,77,973,0:-123.242,-93.8947,-130.474,-51.5572,-58.1873,-81.2122,-39.7993,-46.4296,-4.0981,-69.1542,-114.51,-121.14,-78.8017,-67.0445,-153.196,-120.832,-127.463,-85.1242,-73.3671,-148.077,-160.121,-47.4651,-54.0956,-11.759,0,-74.7111,-81.0339,-79.5304,-127.156,-133.786,-91.4472,-79.6903,-154.4,-160.723,-87.3572,-167.046 0|0:216:29,19,28,43,12,0,43,0:29:1100:19,28,43,12,0,43,0:705,823,1498,455,0,1649,0:-153.035,-104.073,-188.557,-102.346,-134.857,-184.118,-45.1563,-77.6682,-75.9426,-122.415,-124.46,-156.971,-155.242,-98.0542,-211.05,-161.765,-194.277,-192.547,-135.359,-214.663,-251.968,-26.4045,-58.9173,-57.1909,0,-79.3039,-116.61,-103.666,-161.765,-194.277,-192.547,-135.359,-214.663,-251.968,-116.61,-251.968 dDocent_Contig_8845 106 . N T 34.1978 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=32;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 1/1:2:0,2:0:0:2:25:-2.37498,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_8846 13 . T C 3232.53 . AB=0.490909;ABP=3.16823;AC=6;AF=0.5;AN=12;AO=108;CIGAR=1X2M;DP=220;DPB=220;DPRA=0;EPP=237.529;EPPR=196.271;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.592593;PAIREDR=0.696629;PAO=0;PQA=0;PQR=0;PRO=0;QA=4380;QR=3565;RO=89;RPL=0;RPP=237.529;RPPR=196.271;RPR=108;RUN=1;SAF=108;SAP=237.529;SAR=0;SRF=89;SRP=196.271;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:45:18,6,21:18:729:6,21:243,852:-64.8461,-50.2273,-108.533,0,-40.0744,-53.7903 0|1:51:25,4,22:25:996:4,22:158,889:-65.7727,-60.2983,-141.107,0,-69.0174,-75.3959 0|1:22:13,3,6:13:522:3,6:120,242:-16.0367,-10.066,-52.1742,0,-33.1288,-41.2076 0|1:29:14,6,9:14:559:6,9:241,365:-25.8884,-10.246,-54.4745,0,-26.1777,-43.3276 0|1:32:12,3,17:12:480:3,17:106,694:-53.6964,-48.6866,-87.3187,0,-30.9546,-34.4582 0|1:41:7,1,33:7:279:1,33:40,1338:-108.235,-107.047,-129.721,0,-19.6793,-13.0406 dDocent_Contig_8848 23 . A T 50.952 . AB=0.114754;ABP=81.6461;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1M1I3M1X;DP=205;DPB=207.8;DPRA=1.29825;EPP=33.4109;EPPR=417.762;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.214286;PAIREDR=0.424084;PAO=0;PQA=0;PQR=0;PRO=0;QA=550;QR=7588;RO=191;RPL=0;RPP=33.4109;RPPR=417.762;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=191;SRP=417.762;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:23:23,0:23:922:0:0:0,-6.92369,-83.2862 0|1:36:33,3:33:1321:3:120:-0.35061,0,-108.32 0|0:34:34,0:34:1344:0:0:0,-10.235,-121.229 0|0:38:35,3:35:1383:3:118:0,-0.436632,-113.729 0|0:49:45,4:45:1785:4:159:0,-0.0581378,-146.184 0|1:25:21,4:21:833:4:153:-6.61556,0,-67.7606 dDocent_Contig_8849 17 . C G 87.956 . AB=0.166667;ABP=37.7539;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=231;DPB=231;DPRA=0.957627;EPP=24.725;EPPR=482.906;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.3;PAIREDR=0.411765;PAO=0;PQA=0;PQR=0;PRO=0;QA=376;QR=8682;RO=221;RPL=0;RPP=24.725;RPPR=482.906;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=221;SRP=482.906;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:29,2:29:1150:2:71:0,-2.59155,-97.0465 0/0:43:43,0:43:1681:0:0:0,-12.9443,-151.527 0/1:36:30,6:30:1192:6:231:-10.3185,0,-96.7238 0/0:46:44,2:44:1711:2:74:0,-6.82252,-147.198 0/0:26:26,0:26:1019:0:0:0,-7.82678,-92.0075 0/0:49:49,0:49:1929:0:0:0,-14.7505,-173.823 dDocent_Contig_8850 10 . T G 72.5746 . AB=0.123077;ABP=83.2212;AC=1;AF=0.0833333;AN=12;AO=24;CIGAR=1X;DP=399;DPB=399;DPRA=0.94;EPP=55.1256;EPPR=817.312;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.791667;PAIREDR=0.893333;PAO=0;PQA=0;PQR=0;PRO=0;QA=948;QR=15035;RO=375;RPL=0;RPP=55.1256;RPPR=817.312;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=375;SRP=817.312;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:53:51,2:51:2063:2:78:0,-8.55181,-178.446 0/1:65:57,8:57:2234:8:311:-8.78033,0,-181.65 0/0:66:61,5:61:2456:5:193:0,-2.13064,-203.437 0/0:80:75,5:75:3010:5:204:0,-5.33837,-252.234 0/0:70:70,0:70:2814:0:0:0,-21.0721,-253.36 0/0:65:61,4:61:2458:4:162:0,-4.6002,-206.393 dDocent_Contig_8851 30 . T A 184.775 . AB=0.117647;ABP=24.5973;AC=0;AF=0;AN=12;AO=2;CIGAR=1X3M1X;DP=219;DPB=219;DPRA=0.386364;EPP=7.35324;EPPR=432.962;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=72;QR=7482;RO=198;RPL=0;RPP=7.35324;RPPR=432.962;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=198;SRP=432.962;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:37:36,0,0,1:36:1332:0,0,1:0,0,40:0,-10.8371,-119.758,-10.8371,-119.758,-119.758,-7.14243,-116.462,-116.462,-116.161 0|0:36:34,0,0,2:34:1298:0,0,2:0,0,78:0,-10.235,-116.712,-10.235,-116.712,-116.712,-3.43361,-110.3,-110.3,-109.697 0|0:17:12,2,0,3:12:460:2,0,3:72,0,106:-5.01469,-2.74953,-39.9234,-8.62705,-40.5255,-46.3983,0,-31.9004,-37.7719,-36.8688 0|0:37:29,0,2,6:29:1115:0,2,6:0,76,233:-10.4216,-19.1514,-110.684,-12.921,-104.452,-103.85,0,-91.5385,-85.3063,-89.7324 0|0:59:59,0,0,0:59:2234:0,0,0:0,0,0:0,-17.7608,-201.277,-17.7608,-201.277,-201.277,-17.7608,-201.277,-201.277,-201.277 0|0:33:28,0,0,5:28:1043:0,0,5:0,0,198:-8.26288,-16.6917,-102.034,-16.6917,-102.034,-102.034,0,-85.7346,-85.7346,-84.2295 dDocent_Contig_8852 12 . C T 67.1288 . AB=0.114943;ABP=115.053;AC=3;AF=0.25;AN=12;AO=14;CIGAR=1X;DP=192;DPB=192;DPRA=1.54545;EPP=33.4109;EPPR=387.361;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.785714;PAIREDR=0.683616;PAO=0;PQA=0;PQR=0;PRO=0;QA=572;QR=7143;RO=177;RPL=0;RPP=33.4109;RPPR=387.361;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=177;SRP=387.361;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:900:0:0:0,-6.62266,-81.303 0/0:50:48,2:48:1941:2:81:0,-7.36577,-167.194 0/0:33:31,2:31:1231:2:82:0,-2.15431,-103.275 0/1:27:24,3:24:966:3:123:-3.33698,0,-79.1115 0/1:38:33,4:33:1331:4:163:-3.75092,0,-108.792 0/1:22:19,3:19:774:3:123:-4.84213,0,-63.3555 dDocent_Contig_8853 29 . C T 1670.36 . AB=0.776119;ABP=47.3796;AC=1;AF=0.0833333;AN=12;AO=55;CIGAR=1X;DP=694;DPB=694;DPRA=1.00433;EPP=122.441;EPPR=1388.41;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2217;QR=25471;RO=638;RPL=0;RPP=122.441;RPPR=1388.41;RPR=55;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=638;SRP=1388.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:75:75,0:75:2999:0:0:0,-22.5772,-269.991 0/0:165:161,3:161:6420:3:122:0,-38.218,-566.213 0/0:142:142,0:142:5661:0:0:0,-42.7463,-509.294 0/0:141:141,0:141:5672:0:0:0,-42.4452,-510.265 0/0:104:104,0:104:4127:0:0:0,-31.3071,-371.405 0/1:67:15,52:15:592:52:2095:-168.559,0,-33.4462 dDocent_Contig_8854 22 . T A 75.4098 . AB=0.210526;ABP=16.8392;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=241;DPB=241;DPRA=1.11404;EPP=16.0391;EPPR=513.306;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.957447;PAO=0;PQA=0;PQR=0;PRO=0;QA=239;QR=9293;RO=235;RPL=0;RPP=16.0391;RPPR=513.306;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=235;SRP=513.306;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:46:46,0:46:1812:0:0:0,-13.8474,-163.294 0/0:52:51,1:51:2040:1:38:0,-11.8563,-179.993 0/0:56:55,1:55:2170:1:41:0,-12.7631,-191.386 0/0:38:38,0:38:1506:0:0:0,-11.4391,-135.784 0/0:30:30,0:30:1180:0:0:0,-9.0309,-106.481 0/1:19:15,4:15:585:4:160:-9.06386,0,-47.2686 dDocent_Contig_8855 12 . C T 92.9527 . AB=0.148936;ABP=53.3238;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1M1I4M1X2M;DP=166;DPB=167;DPRA=1.73034;EPP=20.3821;EPPR=346.103;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.708861;PAO=0;PQA=0;PQR=0;PRO=0;QA=309;QR=6194;RO=158;RPL=0;RPP=20.3821;RPPR=346.103;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=158;SRP=346.103;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:47:40,7:40:1576:7:270:-10.5171,0,-127.948 0|0:25:25,0:25:981:0:0:0,-7.52575,-88.599 0|0:38:38,0:38:1486:0:0:0,-11.4391,-134.005 0|0:30:29,1:29:1130:1:39:0,-5.13434,-98.0975 0|0:18:18,0:18:705:0:0:0,-5.41854,-63.7783 0|0:8:8,0:8:316:0:0:0,-2.40824,-28.8065 dDocent_Contig_8856 32 . G T 1372.86 . AB=0.346667;ABP=33.6425;AC=4;AF=0.333333;AN=12;AO=54;CIGAR=1X;DP=228;DPB=228;DPRA=1.06667;EPP=120.27;EPPR=380.846;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.425926;PAIREDR=0.534483;PAO=0;PQA=0;PQR=0;PRO=0;QA=2174;QR=6894;RO=174;RPL=0;RPP=120.27;RPPR=380.846;RPR=54;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=174;SRP=380.846;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:49:32,17:32:1278:17:694:-48.0371,0,-100.539 0/1:40:24,16:24:960:16:625:-44.5377,0,-74.6598 0/1:18:13,5:13:495:5:204:-13.3255,0,-39.4645 0/1:43:29,14:29:1131:14:569:-38.6076,0,-89.1309 0/0:36:36,0:36:1452:0:0:0,-10.8371,-130.928 0/0:42:40,2:40:1578:2:82:0,-4.86358,-134.483 dDocent_Contig_8857 24 . C T 64.8981 . AB=0.21875;ABP=24.9965;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=268;DPB=268;DPRA=0.900709;EPP=33.4109;EPPR=520.368;GTI=0;LEN=1;MEANALT=1;MQM=28.7857;MQMR=39.8307;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.23622;PAO=0;PQA=0;PQR=0;PRO=0;QA=540;QR=10132;RO=254;RPL=0;RPP=33.4109;RPPR=554.564;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=250;SRP=520.368;SRR=4;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:53:53,0:53:2093:0:0:0,-15.9546,-129.693 0/0:48:48,0:48:1909:0:0:0,-14.4494,-119.817 0/0:40:40,0:40:1581:0:0:0,-12.0412,-126.927 0/0:61:57,4:57:2305:4:153:0,-8.86268,-147.539 0/0:34:31,3:31:1241:3:108:0,-1.88669,-91.6861 0/1:32:25,7:25:1003:7:279:-8.01267,0,-72.2098 dDocent_Contig_8858 60 . G A 145.099 . AB=0.5;ABP=3.0103;AC=1;AF=0.1;AN=10;AO=6;CIGAR=1X3M1X;DP=116;DPB=116;DPRA=0.461538;EPP=16.0391;EPPR=241.872;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990909;PAO=0;PQA=0;PQR=0;PRO=0;QA=212;QR=4223;RO=110;RPL=6;RPP=16.0391;RPPR=241.872;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=110;SRP=241.872;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 0|1:12:6,6:6:215:6:212:-15.8109,0,-16.0847 0|0:30:30,0:30:1165:0:0:0,-9.0309,-105.14 0|0:10:10,0:10:390:0:0:0,-3.0103,-35.4579 0|0:52:52,0:52:1990:0:0:0,-15.6536,-179.338 0|0:12:12,0:12:463:0:0:0,-3.61236,-42.0213 dDocent_Contig_8859 11 . T C 1388.99 . AB=0.308571;ABP=58.7117;AC=3;AF=0.25;AN=12;AO=61;CIGAR=1X;DP=436;DPB=436;DPRA=0.470769;EPP=135.47;EPPR=817.312;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.95082;PAIREDR=0.949333;PAO=0;PQA=0;PQR=0;PRO=0;QA=2458;QR=15096;RO=375;RPL=0;RPP=135.47;RPPR=817.312;RPR=61;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=375;SRP=817.312;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:65:34,31:34:1364:31:1263:-94.3664,0,-103.447 0/0:63:60,3:60:2435:3:119:0,-7.86987,-208.184 0/1:54:37,17:37:1491:17:677:-45.0033,0,-118.177 0/1:56:50,6:50:2002:6:236:-4.75114,0,-163.507 0/0:68:64,4:64:2582:4:163:0,-5.41161,-217.44 0/0:130:130,0:130:5222:0:0:0,-39.1339,-469.81 dDocent_Contig_8860 9 . T G 127.376 . AB=0.106977;ABP=291.473;AC=2;AF=0.166667;AN=12;AO=33;CIGAR=1X;DP=673;DPB=673;DPRA=0.582558;EPP=74.6689;EPPR=1390.58;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.878788;PAIREDR=0.895149;PAO=0;PQA=0;PQR=0;PRO=0;QA=1273;QR=24581;RO=639;RPL=0;RPP=74.6689;RPPR=1390.58;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=639;SRP=1390.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:121:110,11:110:4216:11:424:-2.08954,0,-343.09 0/0:97:90,7:90:3485:7:270:0,-4.53438,-289.104 0/1:94:82,12:82:3170:12:464:-13.8147,0,-257.148 0/0:62:60,2:60:2329:2:77:0,-11.3547,-202.509 0/0:127:126,1:126:4843:1:38:0,-34.4335,-432.1 0/0:172:171,0:171:6538:0:0:0,-51.4761,-588.21 dDocent_Contig_8861 64 . C A 10452.5 . AB=0.405172;ABP=75.4926;AC=6;AF=0.5;AN=12;AO=376;CIGAR=1X;DP=928;DPB=928;DPRA=0;EPP=819.484;EPPR=1199.49;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.994681;PAIREDR=0.998185;PAO=0;PQA=0;PQR=0;PRO=0;QA=14834;QR=21807;RO=551;RPL=376;RPP=819.484;RPPR=1199.49;RPR=0;RUN=1;SAF=376;SAP=819.484;SAR=0;SRF=551;SRP=1199.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:132:106,26:106:4196:26:1023:-52.6243,0,-337.866 0/1:122:97,25:97:3844:25:965:-50.4212,0,-309.243 0/1:84:58,26:58:2306:26:1022:-66.9824,0,-182.413 0/1:131:107,24:107:4238:24:946:-46.009,0,-341.956 0/1:229:100,128:100:3957:128:5069:-387.057,0,-287.084 0/1:230:83,147:83:3266:147:5809:-453.382,0,-224.754 dDocent_Contig_8862 47 . G T 200.111 . AB=0.243243;ABP=24.1968;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=230;DPB=230;DPRA=1.00654;EPP=26.8965;EPPR=478.563;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.818182;PAIREDR=0.881279;PAO=0;PQA=0;PQR=0;PRO=0;QA=434;QR=8731;RO=219;RPL=0;RPP=26.8965;RPPR=478.563;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=219;SRP=478.563;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:49:49,0:49:1946:0:0:0,-14.7505,-175.343 0/0:32:32,0:32:1293:0:0:0,-9.63296,-116.634 0/0:19:19,0:19:754:0:0:0,-5.71957,-68.1745 0/0:53:53,0:53:2107:0:0:0,-15.9546,-189.814 0/0:40:38,2:38:1513:2:75:0,-4.92161,-129.293 0/1:37:28,9:28:1118:9:359:-21.534,0,-89.7675 dDocent_Contig_8863 25 . T C 310.343 . AB=0.117216;ABP=350.454;AC=1;AF=0.0833333;AN=12;AO=43;CIGAR=1X;DP=1249;DPB=1249;DPRA=1.29117;EPP=96.3836;EPPR=2621.81;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.860465;PAIREDR=0.783582;PAO=0;PQA=0;PQR=0;PRO=0;QA=1719;QR=48096;RO=1206;RPL=0;RPP=96.3836;RPPR=2621.81;RPR=43;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=1206;SRP=2621.81;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:169:169,0:169:6683:0:0:0,-50.8741,-601.183 0/0:230:230,0:230:9154:0:0:0,-69.2369,-823.315 0/0:151:151,0:151:6091:0:0:0,-45.4555,-547.929 0/0:209:209,0:209:8341:0:0:0,-62.9153,-750.219 0/0:217:206,11:206:8215:11:447:0,-24.7385,-698.299 0/1:273:241,32:241:9612:32:1272:-32.5572,0,-782.295 dDocent_Contig_8864 72 . A T 203.895 . AB=0.141975;ABP=183.377;AC=2;AF=0.166667;AN=12;AO=26;CIGAR=8M1X4M;DP=415;DPB=415.538;DPRA=1.06015;EPP=59.4686;EPPR=797.769;GTI=0;LEN=1;MEANALT=3.75;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=867;QR=13793;RO=366;RPL=26;RPP=59.4686;RPPR=797.769;RPR=0;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=366;SRP=797.769;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:53:46,2,1:46:1707:2,1:73,35:0,-7.87825,-146.981,-11.0001,-144.735,-150.398 0|0:53:51,0,0:51:1894:0,0:0,0:0,-15.3525,-170.419,-15.3525,-170.419,-170.419 0|1:100:78,5,16:78:2954:5,16:181,546:-20.8374,-29.5387,-270.256,0,-227.464,-237.418 0|0:67:61,0,2:61:2310:0,2:0,65:0,-18.3628,-207.792,-13.1181,-202.547,-201.945 0|1:62:50,0,7:50:1904:0,7:0,221:-2.76165,-17.8131,-174.066,0,-156.298,-154.191 0|0:80:80,0,0:80:3024:0,0:0,0:0,-24.0824,-272.336,-24.0824,-272.336,-272.336 dDocent_Contig_8865 9 . T A 813.869 . AB=0.171053;ABP=288.73;AC=3;AF=0.25;AN=12;AO=66;CIGAR=1X;DP=587;DPB=587;DPRA=0;EPP=146.327;EPPR=1134.35;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.333333;PAIREDR=0.74856;PAO=0;PQA=0;PQR=0;PRO=0;QA=2476;QR=20080;RO=521;RPL=0;RPP=146.327;RPPR=1134.35;RPR=66;RUN=1;SAF=66;SAP=146.327;SAR=0;SRF=521;SRP=1134.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:76:64,12:64:2436:12:462:-19.052,0,-196.569 0/0:86:85,1:85:3268:1:11:0,-24.7886,-293.165 0/0:126:119,7:119:4600:7:266:0,-13.6283,-389.738 0/1:118:98,20:98:3794:20:762:-33.3854,0,-306.037 0/0:71:65,6:65:2504:6:231:0,-0.21522,-204.402 0/1:110:90,20:90:3478:20:744:-34.1709,0,-280.03 dDocent_Contig_8866 140 . G A 86.8586 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=95;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:95:-8.68532,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_8867 11 . G T 35.4765 . AB=0.2;ABP=10.8276;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=1X;DP=124;DPB=124;DPRA=0.438596;EPP=7.35324;EPPR=267.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=8.67362e-19;PAIRED=0;PAIREDR=0.696721;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=4826;RO=122;RPL=0;RPP=7.35324;RPPR=267.93;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=122;SRP=267.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:10:8,2:8:311:2:82:-4.76938,0,-25.3403 0/0:27:27,0:27:1075:0:0:0,-8.12781,-97.0401 0/0:11:11,0:11:430:0:0:0,-3.31133,-39.0473 0/0:28:28,0:28:1112:0:0:0,-8.42884,-100.365 0/0:15:15,0:15:589:0:0:0,-4.51545,-53.3466 0/0:33:33,0:33:1309:0:0:0,-9.93399,-118.072 dDocent_Contig_8868 31 . A G 45389 . AB=0.481079;ABP=13.0352;AC=6;AF=0.5;AN=12;AO=1551;CIGAR=1X;DP=3224;DPB=3224;DPRA=0;EPP=3370.96;EPPR=3633.71;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999402;PAO=0;PQA=0;PQR=0;PRO=0;QA=61381;QR=65387;RO=1672;RPL=0;RPP=3370.96;RPPR=3633.71;RPR=1551;RUN=1;SAF=1551;SAP=3370.96;SAR=0;SRF=1672;SRP=3633.71;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:633:222,411:222:8679:411:16194:-1265.68,0,-590.136 0/1:623:309,314:309:12038:314:12373:-925.166,0,-895.15 0/1:503:132,371:132:5215:371:14732:-1173.35,0,-317.806 0/1:568:308,260:308:11916:260:10360:-760.752,0,-900.738 0/1:422:305,116:305:11969:116:4587:-285.938,0,-949.632 0/1:475:396,79:396:15570:79:3135:-139.239,0,-1257.19 dDocent_Contig_8870 12 . C A 266.039 . AB=0.177778;ABP=84.1751;AC=3;AF=0.25;AN=12;AO=16;CIGAR=1M1X1M;DP=187;DPB=195;DPRA=0.927835;EPP=37.7539;EPPR=363.475;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.945783;PAO=0;PQA=0;PQR=0;PRO=0;QA=637;QR=6528;RO=166;RPL=0;RPP=37.7539;RPPR=363.475;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=166;SRP=363.475;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:42:42,0,0:42:1657:0,0:0,0:0,-12.6433,-149.358,-12.6433,-149.358,-149.358 0|1:29:22,3,4:22:857:3,4:121,164:-6.91743,-3.56888,-73.0805,0,-60.4441,-69.2157 0|1:30:23,0,7:23:919:0,7:0,282:-16.7221,-23.6458,-99.337,0,-76.0929,-73.9857 0|1:31:25,0,5:25:990:0,5:0,191:-8.18621,-15.712,-97.2091,0,-81.5421,-80.037 0|0:36:36,0,0:36:1393:0,0:0,0:0,-10.8371,-125.631,-10.8371,-125.631,-125.631 0|0:19:18,0,0:18:712:0,0:0,0:0,-5.41854,-63.9924,-5.41854,-63.9924,-63.9924 dDocent_Contig_8871 30 . T A 85.5321 . AB=0.6;ABP=3.44459;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=94;DPB=94;DPRA=0.280899;EPP=9.52472;EPPR=200.614;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.978022;PAO=0;PQA=0;PQR=0;PRO=0;QA=121;QR=3636;RO=91;RPL=0;RPP=9.52472;RPPR=200.614;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=91;SRP=200.614;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:5:2,3:2:82:3:121:-9.77505,0,-6.27453 0/0:24:24,0:24:954:0:0:0,-7.22472,-86.1624 0/0:12:12,0:12:484:0:0:0,-3.61236,-43.9098 0/0:25:25,0:25:1011:0:0:0,-7.52575,-91.2844 0/0:20:20,0:20:794:0:0:0,-6.0206,-71.775 0/0:8:8,0:8:311:0:0:0,-2.40824,-28.3467 dDocent_Contig_8872 17 . T G 203.602 . AB=0.296296;ABP=12.7417;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=120;DPB=120;DPRA=1.45161;EPP=20.3821;EPPR=246.215;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=0.625;PAIREDR=0.5625;PAO=0;PQA=0;PQR=0;PRO=0;QA=326;QR=4401;RO=112;RPL=0;RPP=20.3821;RPPR=246.215;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=112;SRP=246.215;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:27:19,8:19:719:8:326:-21.5821,0,-56.8864 0/0:20:20,0:20:761:0:0:0,-6.0206,-68.7965 0/0:18:18,0:18:715:0:0:0,-5.41854,-64.6716 0/0:19:19,0:19:765:0:0:0,-5.71957,-69.1667 0/0:18:18,0:18:716:0:0:0,-5.41854,-64.7658 0/0:18:18,0:18:725:0:0:0,-5.41854,-65.5754 dDocent_Contig_8873 98 . N T 368.349 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=18;CIGAR=1X;DP=21;DPB=21;DPRA=0;EPP=42.0968;EPPR=0;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=397;QR=0;RO=0;RPL=18;RPP=42.0968;RPPR=0;RPR=0;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,1:0:0:1:29:-2.71967,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:36:-3.41967,-0.60206,0 1/1:14:0,13:0:0:13:297:-26.8723,-3.91339,0 1/1:3:0,2:0:0:2:35:-3.21987,-0.60206,0 dDocent_Contig_8875 51 . T C 1789.24 . AB=0.340102;ABP=46.7594;AC=2;AF=0.166667;AN=12;AO=67;CIGAR=1X;DP=439;DPB=439;DPRA=1.6281;EPP=148.499;EPPR=810.798;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.991935;PAO=0;PQA=0;PQR=0;PRO=0;QA=2677;QR=14850;RO=372;RPL=67;RPP=148.499;RPPR=810.798;RPR=0;RUN=1;SAF=67;SAP=148.499;SAR=0;SRF=372;SRP=810.798;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:46:46,0:46:1851:0:0:0,-13.8474,-166.791 0/0:65:65,0:65:2587:0:0:0,-19.5669,-232.949 0/0:57:57,0:57:2250:0:0:0,-17.1587,-202.661 0/0:74:74,0:74:2962:0:0:0,-22.2762,-266.671 0/1:119:83,36:83:3305:36:1426:-92.7662,0,-261.685 0/1:78:47,31:47:1895:31:1251:-89.3796,0,-147.265 dDocent_Contig_8876 8 . T A 242.225 . AB=0.141892;ABP=167.866;AC=3;AF=0.25;AN=12;AO=29;CIGAR=1X;DP=326;DPB=326;DPRA=0;EPP=65.983;EPPR=647.938;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.965517;PAIREDR=0.956229;PAO=0;PQA=0;PQR=0;PRO=0;QA=1116;QR=11444;RO=297;RPL=0;RPP=65.983;RPPR=647.938;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=297;SRP=647.938;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:39:32,7:32:1222:7:270:-12.9254,0,-98.5355 0/1:62:54,8:54:2079:8:307:-9.32734,0,-168.677 0/0:44:42,2:42:1631:2:78:0,-5.84185,-139.649 0/0:67:66,1:66:2544:1:37:0,-16.4712,-225.458 0/1:47:41,6:41:1588:6:233:-7.19167,0,-129.038 0/0:67:62,5:62:2380:5:191:0,-2.61049,-196.848 dDocent_Contig_8877 28 . T G 44.5413 . AB=0.176471;ABP=18.4661;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=144;DPB=144;DPRA=0.669291;EPP=9.52472;EPPR=309.188;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.503546;PAO=0;PQA=0;PQR=0;PRO=0;QA=119;QR=5668;RO=141;RPL=0;RPP=9.52472;RPPR=309.188;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=141;SRP=309.188;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:725:0:0:0,-5.41854,-65.5728 0/0:36:36,0:36:1451:0:0:0,-10.8371,-130.837 0/0:24:24,0:24:972:0:0:0,-7.22472,-87.7765 0/0:36:36,0:36:1417:0:0:0,-10.8371,-127.788 0/0:13:13,0:13:530:0:0:0,-3.91339,-48.0466 0/1:17:14,3:14:573:3:119:-5.97699,0,-46.7938 dDocent_Contig_8878 17 . A G 175.906 . AB=0.228571;ABP=25.4075;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=239;DPB=239;DPRA=1.03205;EPP=31.2394;EPPR=493.763;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.973451;PAO=0;PQA=0;PQR=0;PRO=0;QA=522;QR=8983;RO=226;RPL=0;RPP=31.2394;RPPR=493.763;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=226;SRP=493.763;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:27,8:27:1064:8:322:-18.8125,0,-85.5147 0/0:45:42,3:42:1677:3:120:0,-2.35866,-139.974 0/0:50:50,0:50:2009:0:0:0,-15.0515,-180.999 0/0:43:42,1:42:1661:1:41:0,-8.84972,-145.618 0/0:38:37,1:37:1485:1:39:0,-7.54258,-129.996 0/0:28:28,0:28:1087:0:0:0,-8.42884,-98.1096 dDocent_Contig_8879 14 . T A 3885.75 . AB=0.210892;ABP=629.544;AC=4;AF=0.333333;AN=12;AO=184;CIGAR=1X;DP=1330;DPB=1330;DPRA=0.767273;EPP=402.561;EPPR=2491.52;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9991;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7355;QR=45961;RO=1146;RPL=0;RPP=402.561;RPPR=2491.52;RPR=184;RUN=1;SAF=184;SAP=402.561;SAR=0;SRF=1146;SRP=2491.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:142:124,18:124:4987:18:707:-21.2078,0,-405.951 0/1:204:139,65:139:5547:65:2589:-171.732,0,-437.649 0/1:264:233,31:233:9361:31:1239:-32.3095,0,-762.407 0/1:253:185,68:185:7447:68:2740:-170.547,0,-593.668 0/0:275:275,0:275:11064:0:0:0,-82.7832,-994.966 0/0:192:190,2:190:7555:2:80:0,-50.2062,-671.969 dDocent_Contig_8880 26 . A C 193.505 . AB=0.0943396;ABP=78.766;AC=1;AF=0.1;AN=10;AO=5;CIGAR=1M1I7M1X5M1X2M;DP=71;DPB=71.6471;DPRA=2.52381;EPP=13.8677;EPPR=107.241;GTI=0;LEN=1;MEANALT=3.66667;MQM=60;MQMR=60;NS=5;NUMALT=5;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=198;QR=1874;RO=48;RPL=0;RPP=13.8677;RPPR=107.241;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=48;SRP=107.241;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:11:7,0,0,0,0,3:7:280:0,0,0,0,3:0,0,0,0,123:-8.05245,-10.1597,-33.2203,-10.1597,-33.2203,-33.2203,-10.1597,-33.2203,-33.2203,-33.2203,-10.1597,-33.2203,-33.2203,-33.2203,-33.2203,0,-23.0654,-23.0654,-23.0654,-23.0654,-22.1623 0|0:23:18,0,1,4,0,0:18:709:0,1,4,0,0:0,40,150,0,0:-6.84724,-12.2658,-70.6033,-8.96573,-67.3078,-67.0068,0,-58.3209,-55.0255,-57.1168,-12.2658,-70.6033,-67.3078,-58.3209,-70.6033,-12.2658,-70.6033,-67.3078,-58.3209,-70.6033,-70.6033 0|1:18:9,2,3,0,2,1:9:341:2,3,0,2,1:80,120,0,81,41:-7.17487,-3.29461,-30.6344,0,-21.3487,-27.0375,-9.88414,-31.2364,-27.9406,-37.8278,-3.2042,-24.555,-21.259,-31.1468,-30.5447,-6.4991,-27.851,-24.555,-34.4425,-27.7613,-34.1415 0|0:12:7,0,1,0,2,0:7:269:0,1,0,2,0:0,38,0,81,0:-4.57657,-6.68378,-28.7568,-3.57174,-25.6412,-25.3402,-6.68378,-28.7568,-25.6412,-28.7568,0,-22.0747,-18.959,-22.0747,-21.4726,-6.68378,-28.7568,-25.6412,-28.7568,-22.0747,-28.7568 .:.:.:.:.:.:.:. 0|0:7:7,0,0,0,0,0:7:275:0,0,0,0,0:0,0,0,0,0:0,-2.10721,-25.1184,-2.10721,-25.1184,-25.1184,-2.10721,-25.1184,-25.1184,-25.1184,-2.10721,-25.1184,-25.1184,-25.1184,-25.1184,-2.10721,-25.1184,-25.1184,-25.1184,-25.1184,-25.1184 dDocent_Contig_8881 16 . G A 3596.73 . AB=0.436667;ABP=13.4623;AC=6;AF=0.5;AN=12;AO=131;CIGAR=1X;DP=300;DPB=300;DPRA=0;EPP=287.473;EPPR=367.818;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0;PAIREDR=0.559524;PAO=0;PQA=0;PQR=0;PRO=0;QA=5105;QR=6646;RO=168;RPL=0;RPP=287.473;RPPR=367.818;RPR=131;RUN=1;SAF=131;SAP=287.473;SAR=0;SRF=168;SRP=367.818;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:39:28,11:28:1130:11:438:-28.034,0,-90.2396 0/1:58:30,27:30:1203:27:1038:-76.1471,0,-90.9777 0/1:48:40,8:40:1571:8:319:-14.6265,0,-127.18 0/1:74:30,44:30:1174:44:1716:-132.386,0,-83.6626 0/1:46:27,19:27:1076:19:754:-54.3303,0,-83.2811 0/1:35:13,22:13:492:22:840:-65.3715,0,-34.0761 dDocent_Contig_8882 26 . A T 175.461 . AB=0.128788;ABP=161.001;AC=3;AF=0.25;AN=12;AO=21;CIGAR=1X;DP=282;DPB=282;DPRA=0;EPP=48.6112;EPPR=569.765;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=832;QR=10457;RO=261;RPL=0;RPP=48.6112;RPPR=569.765;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=261;SRP=569.765;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:29,5:29:1166:5:202:-8.32706,0,-94.9844 0/1:55:47,8:47:1884:8:318:-12.4297,0,-153.207 0/0:45:44,1:44:1777:1:41:0,-9.45178,-156.046 0/1:43:39,4:39:1576:4:153:-1.19514,0,-129.128 0/0:53:52,1:52:2048:1:41:0,-11.86,-180.415 0/0:52:50,2:50:2006:2:77:0,-8.34536,-173.419 dDocent_Contig_8883 13 . G C 396.922 . AB=0.161074;ABP=151.676;AC=1;AF=0.0833333;AN=12;AO=32;CIGAR=1X;DP=752;DPB=752;DPRA=2.10744;EPP=72.4974;EPPR=1566.47;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998611;PAO=0;PQA=0;PQR=0;PRO=0;QA=1278;QR=28669;RO=720;RPL=0;RPP=72.4974;RPPR=1566.47;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=720;SRP=1566.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:162:162,0:162:6420:0:0:0,-48.7669,-577.536 0/0:221:217,4:217:8669:4:161:0,-51.6527,-764.825 0/0:140:136,4:136:5409:4:164:0,-26.9943,-471.501 0/1:149:125,24:125:4965:24:953:-41.2151,0,-401.882 0/0:26:26,0:26:1042:0:0:0,-7.82678,-94.0751 0/0:54:54,0:54:2164:0:0:0,-16.2556,-194.927 dDocent_Contig_8884 9 . T C 667.469 . AB=0.149847;ABP=351.249;AC=4;AF=0.333333;AN=12;AO=53;CIGAR=1X;DP=538;DPB=538;DPRA=0;EPP=118.098;EPPR=1054;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=59.6384;NS=6;NUMALT=1;ODDS=0;PAIRED=0.490566;PAIREDR=0.590909;PAO=0;PQA=0;PQR=0;PRO=0;QA=2057;QR=18609;RO=484;RPL=0;RPP=118.098;RPPR=1054;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=484;SRP=1054;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:53:45,8:45:1733:8:312:-12.4903,0,-140.176 0/1:107:93,14:93:3586:14:545:-17.1861,0,-290.431 0/1:80:66,14:66:2554:14:545:-25.3139,0,-205.884 0/1:87:73,13:73:2804:13:499:-18.9785,0,-226.259 0/0:95:92,3:92:3495:3:117:0,-17.6875,-303.494 0/0:116:115,1:115:4437:1:39:0,-31.0229,-395.389 dDocent_Contig_8886 19 . A T 180.564 . AB=0.219512;ABP=31.0276;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=173;DPB=173;DPRA=0.621212;EPP=22.5536;EPPR=359.132;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.666667;PAIREDR=0.762195;PAO=0;PQA=0;PQR=0;PRO=0;QA=365;QR=6553;RO=164;RPL=0;RPP=22.5536;RPPR=359.132;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=164;SRP=359.132;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:1157:0:0:0,-8.72987,-104.412 0/1:23:19,4:19:764:4:163:-8.13474,0,-62.1574 0/0:35:35,0:35:1425:0:0:0,-10.536,-128.495 0/1:18:13,5:13:524:5:202:-13.1435,0,-42.0884 0/0:42:42,0:42:1690:0:0:0,-12.6433,-152.321 0/0:26:26,0:26:993:0:0:0,-7.82678,-89.661 dDocent_Contig_8887 68 . A T 618.138 . AB=0.285714;ABP=42.0968;AC=2;AF=0.166667;AN=12;AO=34;CIGAR=1X;DP=341;DPB=341;DPRA=6.91304;EPP=76.8404;EPPR=669.652;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990228;PAO=0;PQA=0;PQR=0;PRO=0;QA=1273;QR=11623;RO=307;RPL=34;RPP=76.8404;RPPR=669.652;RPR=0;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=307;SRP=669.652;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:372:0:0:0,-3.0103,-33.8311 0/1:41:25,16:25:941:16:610:-42.8957,0,-72.6581 0/0:13:13,0:13:504:0:0:0,-3.91339,-45.7082 0/1:57:45,12:45:1672:12:433:-22.14,0,-133.58 0/0:148:145,3:145:5497:3:113:0,-34.0131,-484.183 0/0:72:69,3:69:2637:3:117:0,-10.7638,-226.613 dDocent_Contig_8888 11 . T C 1508.86 . AB=0.214286;ABP=241.252;AC=5;AF=0.416667;AN=12;AO=72;CIGAR=1X;DP=411;DPB=411;DPRA=0.896;EPP=159.356;EPPR=736.968;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.333333;PAIREDR=0.316568;PAO=0;PQA=0;PQR=0;PRO=0;QA=2885;QR=13183;RO=338;RPL=0;RPP=159.356;RPPR=736.968;RPR=72;RUN=1;SAF=72;SAP=159.356;SAR=0;SRF=338;SRP=736.968;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:67:55,12:55:2168:12:483:-23.652,0,-175.133 0/0:75:75,0:75:2914:0:0:0,-22.5772,-262.389 0/1:55:44,11:44:1740:11:436:-23.0328,0,-140.27 0/1:74:66,8:66:2584:8:317:-6.62037,0,-210.437 0/1:58:42,15:42:1640:15:609:-37.5982,0,-130.289 0/1:82:56,26:56:2137:26:1040:-69.2047,0,-167.85 dDocent_Contig_8889 17 . T C 951.822 . AB=0.251497;ABP=92.5868;AC=2;AF=0.166667;AN=12;AO=42;CIGAR=1X3M1X;DP=513;DPB=513;DPRA=0.965318;EPP=94.2121;EPPR=1023.6;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.97619;PAIREDR=0.931915;PAO=0;PQA=0;PQR=0;PRO=0;QA=1645;QR=18683;RO=470;RPL=0;RPP=94.2121;RPPR=1023.6;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=470;SRP=1023.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:82:81,0:81:3235:0:0:0,-24.3834,-290.826 0|0:94:94,0:94:3728:0:0:0,-28.2968,-335.555 0|0:78:78,0:78:3110:0:0:0,-23.4803,-279.989 0|0:92:92,0:92:3670:0:0:0,-27.6948,-330.335 0|1:70:53,17:53:2095:17:662:-38.8352,0,-167.678 0|1:97:72,25:72:2845:25:983:-59.5688,0,-226.977 dDocent_Contig_8890 8 . T C 31.8635 . AB=0.117647;ABP=67.7713;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=511;DPB=511;DPRA=0.725333;EPP=18.2106;EPPR=1093.09;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.98008;PAO=0;PQA=0;PQR=0;PRO=0;QA=238;QR=19236;RO=502;RPL=0;RPP=18.2106;RPPR=1093.09;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=502;SRP=1093.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:85:83,1:83:3152:1:19:0,-23.6764,-281.829 0/0:106:106,0:106:4067:0:0:0,-31.9092,-366.116 0/0:130:130,0:130:4981:0:0:0,-39.1339,-448.31 0/0:75:74,0:74:2844:0:0:0,-22.2762,-255.783 0/0:64:64,0:64:2456:0:0:0,-19.2659,-221.244 0/1:51:45,6:45:1736:6:219:-4.70895,0,-141.142 dDocent_Contig_8891 39 . G T 455.139 . AB=0.166667;ABP=72.4974;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=15M1X2M;DP=290;DPB=290.278;DPRA=1.41176;EPP=29.068;EPPR=454.677;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=60;NS=6;NUMALT=7;ODDS=0;PAIRED=1;PAIREDR=0.932692;PAO=0;PQA=0;PQR=0;PRO=0;QA=486;QR=8158;RO=208;RPL=0;RPP=29.068;RPPR=454.677;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=208;SRP=454.677;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:43:38,1,0,0,0,0,0,0:38:1482:1,0,0,0,0,0,0:41,0,0,0,0,0,0:0,-8.0501,-129.568,-11.4391,-129.869,-133.254,-11.4391,-129.869,-133.254,-133.254,-11.4391,-129.869,-133.254,-133.254,-133.254,-11.4391,-129.869,-133.254,-133.254,-133.254,-133.254,-11.4391,-129.869,-133.254,-133.254,-133.254,-133.254,-133.254,-11.4391,-129.869,-133.254,-133.254,-133.254,-133.254,-133.254,-133.254 0|0:29:20,3,2,2,0,2,0,0:20:781:3,2,2,0,2,0,0:113,72,82,0,76,0,0:-3.23381,0,-63.3072,-3.38589,-58.3382,-66.9912,-2.47804,-57.4404,-60.8234,-66.0938,-9.25441,-64.2103,-67.5932,-66.6959,-73.4657,-3.02221,-57.9785,-61.3615,-60.4638,-67.2337,-66.6317,-9.25441,-64.2103,-67.5932,-66.6959,-73.4657,-67.2337,-73.4657,-9.25441,-64.2103,-67.5932,-66.6959,-73.4657,-67.2337,-73.4657,-73.4657 0|0:59:48,0,1,0,3,3,4,0:48:1890:0,1,0,3,3,4,0:0,40,0,115,112,152,0:0,-14.4494,-169.939,-11.1525,-166.644,-166.343,-14.4494,-169.939,-166.644,-169.939,-5.01015,-160.502,-157.206,-160.502,-159.598,-5.28242,-160.771,-157.475,-160.771,-151.333,-159.867,-1.98817,-157.478,-154.183,-157.478,-148.041,-148.31,-156.274,-14.4494,-169.939,-166.644,-169.939,-160.502,-160.771,-157.478,-169.939 0|0:35:21,6,0,3,0,3,0,0:21:822:6,0,3,0,3,0,0:212,0,122,0,117,0,0:-10.916,0,-65.7746,-17.2376,-67.5808,-84.8314,-7.1671,-57.5161,-74.7663,-73.8632,-17.2376,-67.5808,-84.8314,-74.7663,-84.8314,-7.61767,-57.964,-75.2139,-65.1486,-75.2139,-74.3108,-17.2376,-67.5808,-84.8314,-74.7663,-84.8314,-75.2139,-84.8314,-17.2376,-67.5808,-84.8314,-74.7663,-84.8314,-75.2139,-84.8314,-84.8314 0|0:52:41,0,0,0,4,7,0,0:41:1606:0,0,0,4,7,0,0:0,0,0,162,278,0,0:-10.5381,-22.8804,-154.931,-22.8804,-154.931,-154.931,-22.8804,-154.931,-154.931,-154.931,-9.5192,-141.571,-141.571,-141.571,-140.367,0,-132.045,-132.045,-132.045,-118.685,-129.937,-22.8804,-154.931,-154.931,-154.931,-141.571,-132.045,-154.931,-22.8804,-154.931,-154.931,-154.931,-141.571,-132.045,-154.931,-154.931 0|1:72:40,0,0,0,6,11,0,12:40:1577:0,0,0,6,11,0,12:0,0,0,241,430,0,486:-28.0433,-40.0845,-169.835,-40.0845,-169.835,-169.835,-40.0845,-169.835,-169.835,-169.835,-20.2219,-149.975,-149.975,-149.975,-148.169,-4.73273,-134.485,-134.485,-134.485,-114.625,-131.174,-40.0845,-169.835,-169.835,-169.835,-149.975,-134.485,-169.835,0,-129.758,-129.758,-129.758,-109.897,-94.4075,-129.758,-126.146 dDocent_Contig_8892 95 . A G 672.199 . AB=0.197425;ABP=188.294;AC=4;AF=0.333333;AN=12;AO=54;CIGAR=1X;DP=414;DPB=414;DPRA=0;EPP=120.27;EPPR=782.569;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=59.9136;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.666667;PAIREDR=0.590529;PAO=0;PQA=0;PQR=0;PRO=0;QA=1855;QR=12113;RO=359;RPL=30;RPP=4.45795;RPPR=133.716;RPR=24;RUN=1;SAF=30;SAP=4.45795;SAR=24;SRF=253;SRP=133.716;SRR=106;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:56:48,8:48:1589:8:279:-8.59132,0,-126.437 0/0:84:77,7:77:2596:7:244:0,-2.98646,-211.597 0/1:67:43,24:43:1499:24:821:-54.0352,0,-115.035 0/1:60:51,9:51:1722:9:306:-9.80882,0,-137.198 0/1:50:45,5:45:1552:5:174:-0.950388,0,-124.916 0/0:97:95,1:95:3155:1:31:0,-25.9894,-281.195 dDocent_Contig_8893 140 . T C 312.562 . AB=0.325581;ABP=14.3727;AC=3;AF=0.25;AN=12;AO=14;CIGAR=1X;DP=86;DPB=86;DPRA=1;EPP=25.3454;EPPR=159.356;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.0714286;PAIREDR=0.777778;PAO=0;PQA=0;PQR=0;PRO=0;QA=537;QR=2857;RO=72;RPL=0;RPP=33.4109;RPPR=159.356;RPR=14;RUN=1;SAF=1;SAP=25.3454;SAR=13;SRF=0;SRP=159.356;SRR=72;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:669:0:0:0,-5.11751,-60.5366 0/1:10:4,6:4:161:6:241:-19.0562,0,-11.8652 0/0:18:18,0:18:707:0:0:0,-5.41854,-63.9565 0/1:17:13,4:13:524:4:158:-9.48225,0,-42.3893 0/0:8:8,0:8:319:0:0:0,-2.40824,-29.0751 0/1:16:12,4:12:477:4:138:-7.93966,0,-38.4622 dDocent_Contig_8894 1 . N G 1453.25 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=41;CIGAR=1X;DP=41;DPB=41;DPRA=0;EPP=92.0407;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0.341463;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1586;QR=0;RO=0;RPL=0;RPP=92.0407;RPPR=0;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:184:-16.9098,-1.50515,0 1/1:8:0,8:0:0:8:321:-29.2579,-2.40824,0 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 1/1:17:0,17:0:0:17:639:-57.8348,-5.11751,0 1/1:10:0,10:0:0:10:401:-36.449,-3.0103,0 dDocent_Contig_8895 23 . C T 1989.5 . AB=0.401709;ABP=22.6463;AC=4;AF=0.333333;AN=12;AO=95;CIGAR=1X;DP=320;DPB=320;DPRA=1.36098;EPP=209.3;EPPR=491.592;GTI=0;LEN=1;MEANALT=1;MQM=48.3579;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.726316;PAIREDR=0.742222;PAO=0;PQA=0;PQR=0;PRO=0;QA=3489;QR=8972;RO=225;RPL=0;RPP=209.3;RPPR=491.592;RPR=95;RUN=1;SAF=95;SAP=209.3;SAR=0;SRF=225;SRP=491.592;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1631:0:0:0,-12.3422,-147.021 0/1:47:35,12:35:1419:12:448:-19.7899,0,-113.807 0/0:45:44,1:44:1713:1:37:0,-9.84852,-150.694 0/1:55:43,12:43:1732:12:427:-20.5697,0,-139.539 0/1:60:17,43:17:667:43:1587:-111.506,0,-42.2916 0/1:72:45,27:45:1810:27:990:-54.3063,0,-141.434 dDocent_Contig_8896 168 . T A 247.678 . AB=0.297297;ABP=16.2152;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=149;DPB=149;DPRA=1.65179;EPP=26.8965;EPPR=300.502;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.636364;PAIREDR=0.832117;PAO=0;PQA=0;PQR=0;PRO=0;QA=412;QR=4809;RO=137;RPL=11;RPP=26.8965;RPPR=300.502;RPR=0;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=300.502;SRR=137;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:19,0:19:653:0:0:0,-5.71957,-58.7452 0/0:27:27,0:27:955:0:0:0,-8.12781,-86.2605 0/0:19:19,0:19:675:0:0:0,-5.71957,-61.0682 0/1:37:26,11:26:878:11:412:-26.2907,0,-68.1716 0/0:14:14,0:14:520:0:0:0,-4.21442,-47.1387 0/0:32:32,0:32:1128:0:0:0,-9.63296,-101.809 dDocent_Contig_8897 17 . T A 82.2878 . AB=0.121212;ABP=85.263;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=414;DPB=414;DPRA=1.39344;EPP=33.4109;EPPR=869.428;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.857143;PAIREDR=0.558897;PAO=0;PQA=0;PQR=0;PRO=0;QA=571;QR=15967;RO=399;RPL=0;RPP=33.4109;RPPR=869.428;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=399;SRP=869.428;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:47:47,0:47:1883:0:0:0,-14.1484,-169.663 0/0:91:91,0:91:3630:0:0:0,-27.3937,-326.713 0/0:46:46,0:46:1844:0:0:0,-13.8474,-166.165 0/0:60:59,0:59:2371:0:0:0,-17.7608,-213.127 0/1:66:58,8:58:2351:8:325:-9.75165,0,-191.867 0/0:104:98,6:98:3888:6:246:0,-8.787,-327.404 dDocent_Contig_8898 16 . A G 6473.5 . AB=0.506944;ABP=3.19126;AC=6;AF=0.5;AN=12;AO=219;CIGAR=1X;DP=432;DPB=432;DPRA=0;EPP=387.817;EPPR=406.731;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.899543;PAIREDR=0.934272;PAO=0;PQA=0;PQR=0;PRO=0;QA=8746;QR=8483;RO=213;RPL=0;RPP=478.563;RPPR=465.534;RPR=219;RUN=1;SAF=208;SAP=387.817;SAR=11;SRF=206;SRP=406.731;SRR=7;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:22,11:22:852:11:435:-29.5696,0,-67.057 0/1:126:82,44:82:3256:44:1767:-121.312,0,-255.175 0/1:58:14,44:14:561:44:1757:-140.884,0,-33.3721 0/1:91:48,43:48:1922:43:1729:-128.435,0,-145.785 0/1:94:39,55:39:1574:55:2186:-168.613,0,-113.598 0/1:30:8,22:8:318:22:872:-69.7581,0,-19.9559 dDocent_Contig_8899 146 . A C 1876.76 . AB=0.263158;ABP=30.7823;AC=4;AF=0.333333;AN=12;AO=57;CIGAR=1X;DP=134;DPB=134;DPRA=2.82857;EPP=126.784;EPPR=170.214;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2301;QR=3063;RO=77;RPL=0;RPP=126.784;RPPR=170.214;RPR=57;RUN=1;SAF=0;SAP=126.784;SAR=57;SRF=0;SRP=170.214;SRR=77;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:29:22,7:22:883:7:285:-17.2945,0,-71.0486 0/1:28:20,8:20:789:8:325:-21.1908,0,-62.8968 1/1:42:0,42:0:0:42:1691:-152.412,-12.6433,0 0/0:15:15,0:15:589:0:0:0,-4.51545,-53.3409 0/0:13:13,0:13:518:0:0:0,-3.91339,-46.9645 0/0:7:7,0:7:284:0:0:0,-2.10721,-25.9338 dDocent_Contig_8900 17 . T A 1780.2 . AB=0.0535714;ABP=196.892;AC=0;AF=0;AN=12;AO=6;CIGAR=1X2M1X1M;DP=259;DPB=259;DPRA=0;EPP=16.0391;EPPR=328.731;GTI=0;LEN=1;MEANALT=4.33333;MQM=60;MQMR=60;NS=6;NUMALT=6;ODDS=0;PAIRED=0;PAIREDR=0.953333;PAO=0;PQA=0;PQR=0;PRO=0;QA=235;QR=5994;RO=150;RPL=0;RPP=16.0391;RPPR=328.731;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=150;SRP=328.731;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:22:11,0,0,0,0,11,0:11:442:0,0,0,0,11,0:0,0,0,0,413,0:-30.8861,-34.1974,-70.6337,-34.1974,-70.6337,-70.6337,-34.1974,-70.6337,-70.6337,-70.6337,-34.1974,-70.6337,-70.6337,-70.6337,-70.6337,0,-36.8245,-36.8245,-36.8245,-36.8245,-33.5131,-34.1974,-70.6337,-70.6337,-70.6337,-70.6337,-36.8245,-70.6337 0|0:31:17,1,1,0,1,10,1:17:671:1,1,0,1,10,1:38,39,0,41,402,37:-28.0204,-30.0228,-84.9289,-29.9327,-82.0242,-84.8392,-33.1379,-85.2299,-85.1402,-88.3459,-29.7529,-81.8454,-81.7556,-84.9613,-84.6603,0,-52.0996,-52.0097,-55.2154,-51.8305,-52.2051,-30.113,-82.2038,-82.1141,-85.3197,-81.9352,-52.1896,-85.0187 0|0:34:4,0,2,2,5,21,0:4:156:0,2,2,5,21,0:0,79,81,200,834,0:-71.1071,-72.3112,-85.133,-65.8105,-78.6321,-78.0301,-65.6316,-78.4533,-71.9525,-77.8513,-55.8365,-68.6581,-62.1573,-61.9783,-67.153,-3.6566,-16.4762,-9.97563,-9.79562,0,-10.1546,-72.3112,-85.133,-78.6321,-78.4533,-68.6581,-16.4762,-85.133 0|0:47:28,0,3,2,0,9,5:28:1135:0,3,2,0,9,5:0,117,78,0,358,203:-21.0492,-29.478,-123.081,-19.8624,-113.465,-112.562,-23.0671,-116.67,-107.054,-116.068,-29.478,-123.081,-113.465,-116.67,-123.081,0,-93.6057,-83.9902,-87.1948,-93.6057,-90.8964,-13.1591,-106.763,-97.1471,-100.352,-106.763,-77.288,-105.258 0|0:42:29,5,0,0,0,6,2:29:1155:5,0,0,0,6,2:198,0,0,0,237,82:-10.7674,-3.20168,-96.8024,-19.4973,-98.3076,-114.604,-19.4973,-98.3076,-114.604,-114.604,-19.4973,-98.3076,-114.604,-114.604,-114.604,0,-78.8087,-95.1049,-95.1049,-95.1049,-93.2987,-12.7269,-91.5388,-107.835,-107.835,-107.835,-88.336,-107.233 0|0:83:61,6,0,0,0,14,2:61:2435:6,0,0,0,14,2:229,0,0,0,556,82:-27.4119,-26.9951,-225.736,-45.7747,-227.542,-246.325,-45.7747,-227.542,-246.325,-246.325,-45.7747,-227.542,-246.325,-246.325,-246.325,0,-181.773,-200.556,-200.556,-200.556,-196.341,-39.005,-220.774,-239.557,-239.557,-239.557,-193.787,-238.955 dDocent_Contig_8901 26 . G C 95.5621 . AB=0.307692;ABP=7.18621;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=100;DPB=100;DPRA=0.747126;EPP=11.6962;EPPR=211.472;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.645833;PAO=0;PQA=0;PQR=0;PRO=0;QA=159;QR=3807;RO=96;RPL=0;RPP=11.6962;RPPR=211.472;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=96;SRP=211.472;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:13:9,4:9:357:4:159:-10.7781,0,-28.5759 0/0:22:22,0:22:886:0:0:0,-6.62266,-80.0486 0/0:8:8,0:8:320:0:0:0,-2.40824,-29.1677 0/0:21:21,0:21:830:0:0:0,-6.32163,-75.0108 0/0:17:17,0:17:679:0:0:0,-5.11751,-61.441 0/0:19:19,0:19:735:0:0:0,-5.71957,-66.468 dDocent_Contig_8902 26 . A T 5304.63 . AB=0.0863874;ABP=570.64;AC=0;AF=0;AN=12;AO=33;CIGAR=1M1I8M2X1M;DP=382;DPB=384.917;DPRA=0;EPP=74.6689;EPPR=330.903;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.757576;PAIREDR=0.668874;PAO=0;PQA=0;PQR=0;PRO=0;QA=1291;QR=5913;RO=151;RPL=0;RPP=74.6689;RPPR=330.903;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=151;SRP=330.903;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:37:10,4,23,0:10:390:4,23,0:156,914,0:-72.2407,-62.4301,-93.2813,0,-19.2355,-25.1338,-75.251,-94.4854,-32.0575,-107.307 0|0:79:26,8,41,3:26:1019:8,41,3:308,1627,123:-126.093,-108.64,-190.027,0,-58.5163,-71.4544,-123.767,-182.282,-73.6429,-206.661 0|0:47:29,6,11,1:29:1138:6,11,1:239,410,41:-24.8011,-13.8426,-105.638,0,-73.9017,-90.2721,-30.1453,-104.059,-90.1989,-123.441 0|0:82:27,6,47,1:27:1054:6,47,1:237,1875,41:-146.284,-134.91,-219.742,0,-67.1325,-72.4871,-151.028,-218.164,-83.2509,-237.365 0|0:49:15,3,27,3:15:587:3,27,3:120,1078,122:-84.2593,-78.8895,-126.247,0,-38.3694,-40.1276,-78.7109,-117.086,-38.1903,-126.068 0|0:88:44,6,31,6:44:1725:6,31,6:231,1230,227:-88.0056,-82.2865,-222.336,0,-122.899,-132.532,-82.6518,-205.542,-123.264,-222.701 dDocent_Contig_8903 34 . G C 2729.63 . AB=0.406375;ABP=22.121;AC=6;AF=0.5;AN=12;AO=102;CIGAR=1X;DP=251;DPB=251;DPRA=0;EPP=224.5;EPPR=326.56;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.823529;PAIREDR=0.704698;PAO=0;PQA=0;PQR=0;PRO=0;QA=3975;QR=5716;RO=149;RPL=0;RPP=224.5;RPPR=326.56;RPR=102;RUN=1;SAF=102;SAP=224.5;SAR=0;SRF=149;SRP=326.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:27:18,9:18:680:9:351:-23.8225,0,-53.3997 0/1:44:18,26:18:663:26:999:-76.9676,0,-46.7355 0/1:28:19,9:19:739:9:357:-24.0642,0,-58.4084 0/1:49:28,21:28:1071:21:831:-60.3578,0,-81.9356 0/1:48:28,20:28:1111:20:775:-55.6212,0,-85.8338 0/1:55:38,17:38:1452:17:662:-43.351,0,-114.376 dDocent_Contig_8904 205 . A G 73.4126 . AB=0.142857;ABP=10.7656;AC=3;AF=0.25;AN=12;AO=7;CIGAR=1X;DP=102;DPB=102;DPRA=1.32143;EPP=18.2106;EPPR=209.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.857143;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=257;QR=3456;RO=95;RPL=7;RPP=18.2106;RPPR=209.3;RPR=0;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=209.3;SRR=95;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:17,1:17:621:1:37:0,-1.72071,-52.5269 0/1:7:6,1:6:216:1:37:-1.59062,0,-17.6828 0/0:10:10,0:10:368:0:0:0,-3.0103,-33.469 1/1:2:0,2:0:0:2:72:-6.83664,-0.60206,0 0/0:47:44,3:44:1593:3:111:0,-3.79449,-133.3 0/0:18:18,0:18:658:0:0:0,-5.41854,-59.5531 dDocent_Contig_8906 122 . A T 35.8484 . AB=0.25;ABP=7.35324;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X3M1X;DP=125;DPB=125;DPRA=0.941176;EPP=9.52472;EPPR=265.758;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.785124;PAO=0;PQA=0;PQR=0;PRO=0;QA=114;QR=4651;RO=121;RPL=0;RPP=9.52472;RPPR=265.758;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=265.758;SRR=121;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:8:6,2:6:232:2:76:-4.80657,0,-18.8408 0|0:12:12,0:12:461:0:0:0,-3.61236,-41.8407 0|0:21:20,0:20:771:0:0:0,-6.0206,-69.3763 0|0:16:16,0:16:613:0:0:0,-4.81648,-55.5091 0|0:36:36,0:36:1379:0:0:0,-10.8371,-124.394 0|0:32:31,1:31:1195:1:38:0,-5.83569,-104.05 dDocent_Contig_8907 82 . G A 479.674 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=516;DPB=516;DPRA=0.149701;EPP=35.5824;EPPR=1090.92;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=524;QR=17143;RO=501;RPL=15;RPP=35.5824;RPPR=1090.92;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=501;SRP=1090.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:79:79,0:79:2724:0:0:0,-23.7814,-245.416 0/0:58:58,0:58:1972:0:0:0,-17.4597,-177.759 0/0:88:88,0:88:3008:0:0:0,-26.4906,-270.966 0/0:93:93,0:93:3208:0:0:0,-27.9958,-288.958 1/1:15:0,15:0:0:15:524:-47.4903,-4.51545,0 0/0:183:183,0:183:6231:0:0:0,-55.0885,-560.929 dDocent_Contig_8909 27 . T C 69.4745 . AB=0.101449;ABP=193.408;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=439;DPB=439;DPRA=0.742063;EPP=35.5824;EPPR=923.715;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.955189;PAO=0;PQA=0;PQR=0;PRO=0;QA=575;QR=16229;RO=424;RPL=0;RPP=35.5824;RPPR=923.715;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=424;SRP=923.715;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:49:48,1:48:1816:1:9:0,-13.8505,-162.764 0/1:85:76,9:76:2894:9:366:-7.71761,0,-235.013 0/1:53:48,5:48:1805:5:200:-2.42533,0,-146.726 0/0:122:122,0:122:4663:0:0:0,-36.7257,-419.67 0/0:74:74,0:74:2889:0:0:0,-22.2762,-260.158 0/0:56:56,0:56:2162:0:0:0,-16.8577,-194.781 dDocent_Contig_8910 19 . C G 255.824 . AB=0.107843;ABP=411.758;AC=4;AF=0.333333;AN=12;AO=37;CIGAR=1X;DP=508;DPB=508;DPRA=0;EPP=83.3548;EPPR=1025.77;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.540541;PAIREDR=0.549894;PAO=0;PQA=0;PQR=0;PRO=0;QA=1490;QR=18696;RO=471;RPL=0;RPP=83.3548;RPPR=1025.77;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=471;SRP=1025.77;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:63:53,10:53:2069:10:405:-17.8452,0,-167.443 0/1:84:77,7:77:3070:7:280:-0.285413,0,-251.096 0/1:62:54,8:54:2161:8:325:-10.9558,0,-175.994 0/1:97:89,8:89:3543:8:325:-0.419147,0,-289.712 0/0:91:89,2:89:3551:2:74:0,-20.3697,-312.598 0/0:111:109,2:109:4302:2:81:0,-25.7286,-379.452 dDocent_Contig_8911 98 . N G 6956.55 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=228;CIGAR=1X;DP=228;DPB=228;DPRA=0;EPP=498.106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=7701;QR=0;RO=0;RPL=228;RPP=498.106;RPPR=0;RPR=0;RUN=1;SAF=228;SAP=498.106;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:24:0,24:0:0:24:812:-73.3937,-7.22472,0 1/1:18:0,18:0:0:18:615:-55.6726,-5.41854,0 1/1:37:0,37:0:0:37:1258:-113.521,-11.1381,0 1/1:46:0,46:0:0:46:1524:-137.443,-13.8474,0 1/1:54:0,54:0:0:54:1828:-164.799,-16.2556,0 1/1:49:0,49:0:0:49:1664:-150.048,-14.7505,0 dDocent_Contig_8912 24 . T C 38.8491 . AB=0.113636;ABP=60.0608;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=269;DPB=269;DPRA=1.09195;EPP=16.0391;EPPR=574.108;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.806084;PAO=0;PQA=0;PQR=0;PRO=0;QA=244;QR=10423;RO=263;RPL=0;RPP=16.0391;RPPR=574.108;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=263;SRP=574.108;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:32,0:32:1287:0:0:0,-9.63296,-116.093 0/0:66:66,0:66:2636:0:0:0,-19.868,-237.357 0/0:51:50,1:50:1985:1:41:0,-11.258,-174.745 0/0:48:48,0:48:1902:0:0:0,-14.4494,-171.382 0/1:44:39,5:39:1529:5:203:-5.40774,0,-124.604 0/0:28:28,0:28:1084:0:0:0,-8.42884,-97.8395 dDocent_Contig_8913 13 . C T 815.733 . AB=0.191304;ABP=193.382;AC=5;AF=0.416667;AN=12;AO=47;CIGAR=1X;DP=287;DPB=287;DPRA=0;EPP=105.07;EPPR=524.164;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.978723;PAIREDR=0.995833;PAO=0;PQA=0;PQR=0;PRO=0;QA=1880;QR=9530;RO=240;RPL=0;RPP=105.07;RPPR=524.164;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=240;SRP=524.164;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:24,4:24:954:4:164:-6.72106,0,-77.7378 0/1:40:29,11:29:1156:11:446:-28.4546,0,-92.2801 0/1:85:69,16:69:2712:16:637:-32.0731,0,-218.609 0/1:48:41,7:41:1626:7:266:-9.84689,0,-132.127 0/1:29:23,6:23:931:6:245:-13.6996,0,-75.3627 0/0:57:54,3:54:2151:3:122:0,-5.78622,-182.395 dDocent_Contig_8914 120 . T C 100.75 . AB=0.214286;ABP=22.8638;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1M2I2M1X1M1X1M2X3M3X;DP=83;DPB=83.7333;DPRA=1.01818;EPP=16.0391;EPPR=165.871;GTI=0;LEN=1;MEANALT=1;MQM=59.5;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=1;PQA=0;PQR=0;PRO=0;QA=233;QR=2460;RO=75;RPL=0;RPP=16.0391;RPPR=165.871;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=165.871;SRR=75;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:13:12,0:12:391:0:0:0,-3.61236,-35.3144 0|0:14:13,0:13:425:0:0:0,-3.91339,-38.5064 0|0:15:15,0:15:483:0:0:0,-4.51545,-43.7798 0|0:13:13,0:13:435:0:0:0,-3.91339,-39.472 0|1:23:20,3:20:664:3:117:-3.98352,0,-53.1499 0|1:5:2,3:2:62:3:116:-9.31225,0,-4.38356 dDocent_Contig_8915 10 . C T 154.772 . AB=0.113772;ABP=219.39;AC=3;AF=0.25;AN=12;AO=23;CIGAR=1X;DP=262;DPB=262;DPRA=1.21622;EPP=52.9542;EPPR=521.992;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.782609;PAIREDR=0.723849;PAO=0;PQA=0;PQR=0;PRO=0;QA=920;QR=9633;RO=239;RPL=0;RPP=52.9542;RPPR=521.992;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=239;SRP=521.992;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:22,1:22:896:1:41:0,-2.82912,-76.8501 0/1:59:54,5:54:2165:5:205:-1.07424,0,-177.25 0/1:52:43,9:43:1731:9:358:-16.9285,0,-140.346 0/0:35:32,3:32:1289:3:111:0,-0.186512,-105.925 0/0:37:37,0:37:1483:0:0:0,-11.1381,-133.711 0/1:56:51,5:51:2069:5:205:-1.97733,0,-169.527 dDocent_Contig_8916 16 . A G 464.175 . AB=0.346154;ABP=13.7006;AC=3;AF=0.25;AN=12;AO=20;CIGAR=1X;DP=135;DPB=135;DPRA=0.75;EPP=46.4397;EPPR=252.73;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.9;PAIREDR=0.808696;PAO=0;PQA=0;PQR=0;PRO=0;QA=810;QR=4612;RO=115;RPL=0;RPP=46.4397;RPPR=252.73;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=115;SRP=252.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:908:0:0:0,-6.92369,-82.0225 0/0:29:27,2:27:1090:2:79:0,-1.23263,-90.8877 0/0:31:31,0:31:1247:0:0:0,-9.33193,-112.495 0/1:20:18,2:18:722:2:81:-1.66513,0,-59.2832 0/1:20:9,11:9:361:11:446:-34.4754,0,-26.8309 0/1:12:7,5:7:284:5:204:-15.1317,0,-22.3214 dDocent_Contig_8919 11 . C A 749.536 . AB=0.242647;ABP=81.2472;AC=3;AF=0.25;AN=12;AO=34;CIGAR=1X;DP=264;DPB=264;DPRA=0.966667;EPP=76.8404;EPPR=502.449;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.982609;PAO=0;PQA=0;PQR=0;PRO=0;QA=1353;QR=9200;RO=230;RPL=0;RPP=76.8404;RPPR=502.449;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=230;SRP=502.449;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:37,1:37:1489:1:41:0,-7.34457,-130.158 0/0:36:36,0:36:1429:0:0:0,-10.8371,-128.858 0/0:54:54,0:54:2187:0:0:0,-16.2556,-196.988 0/1:38:35,3:35:1405:3:123:-0.0256485,0,-115.261 0/1:43:26,17:26:1034:17:663:-47.0445,0,-80.4076 0/1:55:42,13:42:1656:13:526:-31.1301,0,-132.706 dDocent_Contig_8920 85 . C T 762.568 . AB=0.818182;ABP=32.0291;AC=1;AF=0.1;AN=10;AO=27;CIGAR=1X;DP=101;DPB=101;DPRA=1.94118;EPP=61.6401;EPPR=163.699;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=972;QR=2646;RO=74;RPL=27;RPP=61.6401;RPPR=163.699;RPR=0;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=74;SRP=163.699;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:661:0:0:0,-5.71957,-59.8115 0/0:9:9,0:9:317:0:0:0,-2.70927,-28.8693 0/0:6:6,0:6:217:0:0:0,-1.80618,-19.8816 ./.:.:.:.:.:.:.:. 0/0:34:34,0:34:1238:0:0:0,-10.235,-111.723 0/1:33:6,27:6:213:27:972:-77.8588,0,-9.58205 dDocent_Contig_8921 49 . A G 1475.5 . AB=0.428571;ABP=8.59409;AC=4;AF=0.333333;AN=12;AO=59;CIGAR=1M1D1X;DP=214;DPB=194.333;DPRA=0;EPP=131.127;EPPR=337.417;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.627119;PAIREDR=0.5;PAO=0;PQA=0;PQR=0;PRO=0;QA=2323;QR=6019;RO=154;RPL=0;RPP=131.127;RPPR=337.417;RPR=59;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=154;SRP=337.417;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:24:16,7:16:602:7:277:-17.9756,0,-47.189 0|1:35:13,22:13:501:22:858:-66.9942,0,-34.8999 0|1:24:15,9:15:597:9:352:-24.8126,0,-46.844 0|1:43:27,16:27:1059:16:640:-44.989,0,-82.665 0|0:39:36,3:36:1407:3:116:0,-0.922634,-116.08 0|0:49:47,2:47:1853:2:80:0,-7.15868,-159.4 dDocent_Contig_8922 162 . C G 215.758 . AB=0.144928;ABP=78.5712;AC=4;AF=0.333333;AN=12;AO=14;CIGAR=1X;DP=151;DPB=151;DPRA=4.11429;EPP=33.4109;EPPR=300.502;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=566;QR=5370;RO=137;RPL=14;RPP=33.4109;RPPR=300.502;RPR=0;RUN=1;SAF=0;SAP=33.4109;SAR=14;SRF=0;SRP=300.502;SRR=137;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:25,1:25:989:1:41:0,-3.73221,-85.2105 0/1:22:20,2:20:764:2:82:-1.15702,0,-62.4505 0/1:47:39,8:39:1549:8:323:-15.29,0,-125.509 0/0:47:46,1:46:1804:1:41:0,-10.0538,-158.481 1/1:2:0,2:0:0:2:79:-7.49724,-0.60206,0 0/0:7:7,0:7:264:0:0:0,-2.10721,-24.1171 dDocent_Contig_8923 19 . T C 109.526 . AB=0.263158;ABP=12.2676;AC=1;AF=0.0833333;AN=12;AO=21;CIGAR=1X;DP=539;DPB=539;DPRA=5.19;EPP=48.6112;EPPR=1127.83;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.761905;PAIREDR=0.969112;PAO=0;PQA=0;PQR=0;PRO=0;QA=843;QR=20631;RO=518;RPL=0;RPP=48.6112;RPPR=1127.83;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=518;SRP=1127.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:160:158,2:158:6291:2:79:0,-40.6676,-558.444 0/0:124:122,2:122:4843:2:82:0,-29.548,-427.992 0/0:137:128,9:128:5102:9:362:0,-8.29713,-426.087 0/0:79:76,3:76:3022:3:122:0,-12.4089,-260.699 0/0:20:20,0:20:809:0:0:0,-6.0206,-73.1241 0/1:19:14,5:14:564:5:198:-12.4754,0,-45.3836 dDocent_Contig_8924 22 . A T 317.541 . AB=0.2;ABP=65.5487;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=225;DPB=225;DPRA=1.10345;EPP=37.7539;EPPR=456.848;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9617;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8125;PAIREDR=0.751196;PAO=0;PQA=0;PQR=0;PRO=0;QA=648;QR=8285;RO=209;RPL=0;RPP=37.7539;RPPR=456.848;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=209;SRP=456.848;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:36,0:36:1431:0:0:0,-10.8371,-129.048 0/0:56:56,0:56:2211:0:0:0,-16.8577,-199.169 0/0:25:25,0:25:980:0:0:0,-7.52575,-88.4972 0/0:28:28,0:28:1135:0:0:0,-8.42884,-102.43 0/1:31:25,6:25:979:6:243:-12.9162,0,-79.078 0/1:49:39,10:39:1549:10:405:-22.0597,0,-124.892 dDocent_Contig_8925 28 . C T 81.1253 . AB=0.115789;ABP=124.818;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=745;DPB=745;DPRA=0.790262;EPP=29.068;EPPR=1594.7;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.7394;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.987722;PAO=0;PQA=0;PQR=0;PRO=0;QA=433;QR=29006;RO=733;RPL=0;RPP=29.068;RPPR=1594.7;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=733;SRP=1594.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:176:176,0:176:6978:0:0:0,-52.9813,-627.709 0/0:116:115,1:115:4508:1:12:0,-33.7195,-404.459 0/0:144:144,0:144:5693:0:0:0,-43.3483,-512.181 0/0:127:127,0:127:4972:0:0:0,-38.2308,-447.361 0/1:95:84,11:84:3352:11:421:-9.6354,0,-269.416 0/0:87:87,0:87:3503:0:0:0,-26.1896,-313.409 dDocent_Contig_8926 131 . G A 3453.23 . AB=0.3725;ABP=59.4903;AC=5;AF=0.416667;AN=12;AO=150;CIGAR=1X;DP=469;DPB=469;DPRA=0;EPP=328.731;EPPR=695.71;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.965517;PAO=0;PQA=0;PQR=0;PRO=0;QA=5295;QR=11262;RO=319;RPL=0;RPP=328.731;RPPR=695.71;RPR=150;RUN=1;SAF=0;SAP=328.731;SAR=150;SRF=0;SRP=695.71;SRR=319;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:67:47,20:47:1642:20:714:-44.4164,0,-127.893 0/1:109:73,36:73:2596:36:1272:-81.9681,0,-201.078 0/0:69:68,1:68:2394:1:35:0,-17.2724,-212.215 0/1:103:77,26:77:2726:26:930:-53.0117,0,-214.577 0/1:35:26,9:26:909:9:324:-18.9696,0,-71.5855 0/1:86:28,58:28:995:58:2020:-156.179,0,-63.9764 dDocent_Contig_8927 20 . G A 1696.34 . AB=0.0666667;ABP=76.4061;AC=0;AF=0;AN=12;AO=3;CIGAR=2X;DP=177;DPB=177;DPRA=0;EPP=9.52472;EPPR=239.701;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.666667;PAIREDR=0.788991;PAO=0;PQA=0;PQR=0;PRO=0;QA=111;QR=4311;RO=109;RPL=0;RPP=9.52472;RPPR=239.701;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=109;SRP=239.701;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:12:5,0,7:5:202:0,7:0,281:-22.0496,-23.5548,-40.2092,0,-17.0569,-14.9497 0|0:24:17,0,7:17:673:0,7:0,275:-17.8926,-23.0101,-78.401,0,-55.7843,-53.677 0|0:34:24,0,10:24:964:0,10:0,396:-25.7629,-32.9876,-112.427,0,-79.8369,-76.8266 0|0:28:17,0,11:17:651:0,11:0,433:-30.8944,-36.0119,-89.4168,0,-53.7939,-50.4826 0|0:45:25,3,17:25:990:3,17:111,667:-47.3436,-45.794,-126.372,0,-72.4257,-76.3841 0|0:34:21,0,13:21:831:0,13:0,520:-36.9126,-43.2343,-111.618,0,-68.7818,-64.8684 dDocent_Contig_8928 128 . C T 396.497 . AB=0.5;ABP=3.0103;AC=3;AF=0.25;AN=12;AO=14;CIGAR=1X;DP=219;DPB=219;DPRA=0.22335;EPP=33.4109;EPPR=448.162;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=500;QR=7774;RO=205;RPL=0;RPP=33.4109;RPPR=448.162;RPR=14;RUN=1;SAF=0;SAP=33.4109;SAR=14;SRF=0;SRP=448.162;SRR=205;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:11:11,0:11:412:0:0:0,-3.31133,-37.4256 0/0:8:8,0:8:305:0:0:0,-2.40824,-27.8102 0/1:16:8,8:8:307:8:268:-19.6224,0,-23.1743 1/1:6:0,6:0:0:6:232:-21.2491,-1.80618,0 0/0:95:95,0:95:3611:0:0:0,-28.5978,-325.113 0/0:83:83,0:83:3139:0:0:0,-24.9855,-282.672 dDocent_Contig_8929 96 . T G 110.508 . AB=0.131313;ABP=236.784;AC=2;AF=0.166667;AN=12;AO=26;CIGAR=1X;DP=295;DPB=295;DPRA=4.08247;EPP=59.4686;EPPR=587.136;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=814;QR=8950;RO=269;RPL=26;RPP=59.4686;RPPR=587.136;RPR=0;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=269;SRP=587.136;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:42:42,0:42:1399:0:0:0,-12.6433,-126.202 0/0:24:24,0:24:799:0:0:0,-7.22472,-72.2207 0/0:15:15,0:15:515:0:0:0,-4.51545,-46.6765 0/0:16:16,0:16:509:0:0:0,-4.81648,-46.1145 0/1:109:96,13:96:3225:13:393:-2.85067,0,-257.679 0/1:89:76,13:76:2503:13:421:-11.4119,0,-198.735 dDocent_Contig_8930 20 . G C 49967.7 . AB=0.634992;ABP=286.174;AC=12;AF=1;AN=12;AO=1136;CIGAR=10M1X3M;DP=1789;DPB=1566.14;DPRA=0;EPP=2469.8;EPPR=217.986;GTI=0;LEN=1;MEANALT=6;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=45123;QR=3845;RO=99;RPL=0;RPP=2469.8;RPPR=217.986;RPR=1136;RUN=1;SAF=1136;SAP=2469.8;SAR=0;SRF=99;SRP=217.986;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:232:8,0,111,109:8:292:0,111,109:0,4410,4218:-683.175,-685.583,-709.436,-322.599,-346.452,-313.038,-339.195,-363.047,0,-330.235 1|1:265:32,14,57,158:32:1243:14,57,158:559,2228,6306:-590.116,-553.708,-651.624,-417.202,-473.291,-502.174,-80.4177,-136.506,0,-134.986 1|1:297:27,0,117,151:27:1062:0,117,151:0,4466,6027:-764.768,-772.896,-860.254,-409.003,-496.36,-461.14,-276.535,-363.896,0,-318.44 1|1:212:5,0,77,128:5:199:0,77,128:0,3012,5109:-649.626,-651.131,-667.517,-404.406,-420.792,-397.613,-230.376,-246.763,0,-208.231 1|1:363:9,0,47,302:9:343:0,47,302:0,1742,12039:-1100.59,-1103.3,-1131.44,-963.286,-991.419,-977.271,-111.91,-140.048,0,-49.1369 1|1:420:18,0,107,288:18:706:0,107,288:0,4184,11424:-1219.71,-1225.13,-1283.19,-882.263,-940.323,-908.112,-284.814,-342.874,0,-256.178 dDocent_Contig_8932 39 . G A 3280.04 . AB=0.564103;ABP=9.97015;AC=5;AF=0.416667;AN=12;AO=110;CIGAR=1X;DP=230;DPB=230;DPRA=1.11429;EPP=241.872;EPPR=263.587;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4382;QR=4669;RO=120;RPL=0;RPP=241.872;RPPR=263.587;RPR=110;RUN=1;SAF=110;SAP=241.872;SAR=0;SRF=120;SRP=263.587;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:9,22:9:355:22:859:-68.2866,0,-22.9754 0/1:31:10,21:10:384:21:837:-66.3119,0,-25.5725 0/1:52:18,34:18:707:34:1367:-107.636,0,-48.2993 0/1:32:12,20:12:479:20:797:-62.4137,0,-33.8288 0/0:35:35,0:35:1340:0:0:0,-10.536,-120.854 0/1:49:36,13:36:1404:13:522:-32.5773,0,-111.858 dDocent_Contig_8933 10 . C G 1903.6 . AB=0.184136;ABP=308.917;AC=3;AF=0.25;AN=12;AO=78;CIGAR=1X1M;DP=586;DPB=586;DPRA=0;EPP=172.385;EPPR=1010.57;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.987179;PAIREDR=0.952586;PAO=0;PQA=0;PQR=0;PRO=0;QA=3126;QR=18630;RO=464;RPL=0;RPP=172.385;RPPR=1010.57;RPR=78;RUN=1;SAF=78;SAP=172.385;SAR=0;SRF=464;SRP=1010.57;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:81:62,0,0,19:62:2502:0,0,19:0,0,756:-43.9783,-62.6422,-268.897,-62.6422,-268.897,-268.897,0,-206.654,-206.654,-200.934 0|1:154:102,0,9,43:102:4121:0,9,43:0,364,1726:-111.506,-142.211,-481.953,-112.2,-451.943,-449.233,0,-339.741,-309.73,-326.797 0|0:95:85,3,0,7:85:3393:3,0,7:120,0,283:0,-15.7038,-294.223,-25.5875,-295.126,-305.011,-2.25201,-271.793,-281.678,-279.571 0|1:118:86,20,9,3:86:3453:20,9,3:801,360,122:-40.0975,0,-278.498,-36.3338,-254.866,-318.144,-55.9222,-274.455,-310.79,-339.539 0|0:56:54,0,0,2:54:2144:0,0,2:0,0,81:0,-16.2556,-192.734,-16.2556,-192.734,-192.734,-9.17195,-186.054,-186.054,-185.452 0|0:82:75,0,3,4:75:3017:0,3,4:0,112,158:0,-22.5772,-271.226,-13.4189,-262.059,-261.156,-9.56364,-258.225,-249.058,-257.021 dDocent_Contig_8934 42 . C T 490.076 . AB=0.666667;ABP=8.80089;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=110;DPB=110;DPRA=1.39535;EPP=37.7539;EPPR=207.129;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=638;QR=3723;RO=94;RPL=0;RPP=37.7539;RPPR=207.129;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=94;SRP=207.129;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:1005:0:0:0,-7.52575,-90.7448 0/0:27:27,0:27:1063:0:0:0,-8.12781,-95.9574 0/0:10:10,0:10:399:0:0:0,-3.0103,-36.2675 0/0:20:20,0:20:801:0:0:0,-6.0206,-72.4043 0/0:4:4,0:4:138:0:0:0,-1.20412,-12.7528 0/1:24:8,16:8:317:16:638:-50.5305,0,-21.6664 dDocent_Contig_8935 35 . T A 154.381 . AB=0.241379;ABP=19.8579;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=242;DPB=242;DPRA=0.787234;EPP=29.068;EPPR=502.449;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0.578261;PAO=0;PQA=0;PQR=0;PRO=0;QA=466;QR=9226;RO=230;RPL=0;RPP=29.068;RPPR=502.449;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=230;SRP=502.449;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:29:22,7:22:882:7:278:-16.66,0,-70.9568 0/0:49:47,2:47:1893:2:71:0,-8.00841,-163.828 0/0:20:19,1:19:747:1:41:0,-1.92603,-63.4497 0/0:50:48,2:48:1933:2:76:0,-7.83724,-166.948 0/0:54:54,0:54:2150:0:0:0,-16.2556,-193.661 0/0:40:40,0:40:1621:0:0:0,-12.0412,-146.116 dDocent_Contig_8936 98 . N A 150.999 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=3X9I3X2I4X;DP=4;DPB=10.5;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=4;PQA=133;PQR=0;PRO=0;QA=160;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:1:0,1:0:0:1:40:-3.60954,-0.30103,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:3:0,3:0:0:3:120:-11.1879,-0.90309,0 .:.:.:.:.:.:.:. dDocent_Contig_8937 7 . A C 151.753 . AB=0.121795;ABP=196.828;AC=3;AF=0.25;AN=12;AO=19;CIGAR=1X;DP=359;DPB=359;DPRA=0.768473;EPP=44.2683;EPPR=739.139;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=736;QR=12772;RO=339;RPL=0;RPP=44.2683;RPPR=739.139;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=339;SRP=739.139;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:49:42,7:42:1574:7:270:-9.91506,0,-127.183 0/1:61:54,7:54:2056:7:271:-6.39361,0,-166.912 0/0:46:46,0:46:1741:0:0:0,-13.8474,-156.949 0/1:46:40,5:40:1509:5:195:-4.08792,0,-122.269 0/0:85:85,0:85:3186:0:0:0,-25.5875,-286.9 0/0:72:72,0:72:2706:0:0:0,-21.6742,-243.74 dDocent_Contig_8938 98 . N G 252.009 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=10;CIGAR=1X;DP=10;DPB=10;DPRA=0;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=261;QR=0;RO=0;RPL=10;RPP=24.725;RPPR=0;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:34:-3.22979,-0.60206,0 1/1:5:0,5:0:0:5:122:-11.2218,-1.50515,0 dDocent_Contig_8939 31 . T C 291.938 . AB=0.163636;ABP=111.11;AC=2;AF=0.166667;AN=12;AO=21;CIGAR=1X;DP=407;DPB=407;DPRA=0.704142;EPP=48.6112;EPPR=839.027;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=843;QR=14751;RO=385;RPL=0;RPP=48.6112;RPPR=839.027;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=385;SRP=839.027;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:63:57,6:57:2191:6:244:-3.37373,0,-178.434 0/0:59:58,1:58:2243:1:41:0,-13.6662,-197.979 0/1:47:35,12:35:1327:12:476:-29.0389,0,-105.564 0/0:69:66,2:66:2512:2:82:0,-12.8935,-218.574 0/0:103:103,0:103:3911:0:0:0,-31.0061,-352.073 0/0:66:66,0:66:2567:0:0:0,-19.868,-231.206 dDocent_Contig_8940 22 . T A 3026.93 . AB=0.573864;ABP=11.3507;AC=4;AF=0.333333;AN=12;AO=101;CIGAR=1X;DP=248;DPB=248;DPRA=1.22222;EPP=222.329;EPPR=322.217;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4019;QR=5907;RO=147;RPL=0;RPP=222.329;RPPR=322.217;RPR=101;RUN=1;SAF=101;SAP=222.329;SAR=0;SRF=147;SRP=322.217;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:5:1,4:1:40:4:149:-12.268,0,-2.49053 0/1:28:6,22:6:244:22:873:-70.4522,0,-13.9098 0/1:48:6,42:6:241:42:1690:-137.872,0,-7.61574 0/1:95:62,33:62:2478:33:1307:-89.3001,0,-194.557 0/0:19:19,0:19:765:0:0:0,-5.71957,-69.1702 0/0:53:53,0:53:2139:0:0:0,-15.9546,-192.683 dDocent_Contig_8941 162 . G A 370.057 . AB=0.164319;ABP=211.482;AC=4;AF=0.333333;AN=12;AO=35;CIGAR=1X;DP=329;DPB=329;DPRA=0.918103;EPP=79.0118;EPPR=632.767;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=40;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1265;QR=11510;RO=294;RPL=35;RPP=79.0118;RPPR=632.767;RPR=0;RUN=1;SAF=0;SAP=79.0118;SAR=35;SRF=0;SRP=641.423;SRR=294;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:55:49,6:49:1969:6:225:-2.92072,0,-147.193 0/1:77:57,20:57:2253:20:685:-35.2196,0,-164.945 0/1:36:32,4:32:1270:4:160:-2.84919,0,-95.4014 0/1:45:40,5:40:1572:5:195:-3.21538,0,-117.825 0/0:68:68,0:68:2544:0:0:0,-20.47,-213.359 0/0:48:48,0:48:1902:0:0:0,-14.4494,-158.686 dDocent_Contig_8944 46 . C T 396.428 . AB=0.158537;ABP=169.101;AC=3;AF=0.25;AN=12;AO=29;CIGAR=1X;DP=325;DPB=325;DPRA=0.865546;EPP=65.983;EPPR=611.492;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.758621;PAIREDR=0.472973;PAO=0;PQA=0;PQR=0;PRO=0;QA=1137;QR=11816;RO=296;RPL=0;RPP=65.983;RPPR=637.11;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=293;SRP=619.973;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:72:72,0:72:2862:0:0:0,-21.6742,-257.673 0/1:64:54,10:54:2172:10:394:-16.5473,0,-176.382 0/0:47:47,0:47:1885:0:0:0,-14.1484,-169.852 0/0:42:39,3:39:1532:3:123:0,-1.17847,-126.648 0/1:48:37,11:37:1498:11:449:-26.3164,0,-120.611 0/1:52:47,5:47:1867:5:171:-0.0602824,0,-152.585 dDocent_Contig_8945 33 . A C 7328.56 . AB=0.329787;ABP=215.907;AC=4;AF=0.333333;AN=12;AO=279;CIGAR=1X;DP=887;DPB=887;DPRA=10.3171;EPP=608.851;EPPR=1321.09;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.991763;PAO=0;PQA=0;PQR=0;PRO=0;QA=11049;QR=24153;RO=607;RPL=0;RPP=608.851;RPPR=1321.09;RPR=279;RUN=1;SAF=279;SAP=608.851;SAR=0;SRF=607;SRP=1321.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:253:186,67:186:7405:67:2644:-161.913,0,-589.928 0/1:200:115,84:115:4584:84:3303:-237.017,0,-352.167 0/1:139:121,18:121:4820:18:723:-23.5506,0,-391.857 0/1:254:144,110:144:5722:110:4379:-317.598,0,-438.313 0/0:28:28,0:28:1091:0:0:0,-8.42884,-98.4656 0/0:13:13,0:13:531:0:0:0,-3.91339,-48.1364 dDocent_Contig_8946 21 . T C 788.956 . AB=0.234568;ABP=102.147;AC=5;AF=0.416667;AN=12;AO=38;CIGAR=1X;DP=167;DPB=167;DPRA=6.48;EPP=85.5263;EPPR=283.13;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.526316;PAIREDR=0.651163;PAO=0;PQA=0;PQR=0;PRO=0;QA=1499;QR=4604;RO=129;RPL=0;RPP=85.5263;RPPR=283.13;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=129;SRP=283.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:5:5,0:5:181:0:0:0,-1.50515,-16.6424 0/1:44:38,6:38:1335:6:239:-8.63911,0,-107.176 0/1:18:15,3:15:535:3:122:-5.95395,0,-43.061 0/1:29:26,3:26:929:3:114:-1.90142,0,-75.1863 0/1:31:13,18:13:475:18:715:-55.3429,0,-33.7575 0/1:40:32,8:32:1149:8:309:-16.1273,0,-91.665 dDocent_Contig_8947 26 . A T 697.082 . AB=0.192308;ABP=152.675;AC=1;AF=0.0833333;AN=12;AO=49;CIGAR=2X;DP=1006;DPB=1006;DPRA=1.52823;EPP=109.412;EPPR=2074.59;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.980084;PAO=0;PQA=0;PQR=0;PRO=0;QA=1942;QR=37883;RO=954;RPL=0;RPP=109.412;RPPR=2074.59;RPR=49;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=954;SRP=2074.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:182:147,35:147:5854:35:1394:-70.93,0,-471.89 0|0:233:228,5:228:9046:5:204:0,-51.396,-794.894 0|0:125:122,3:122:4831:3:122:0,-26.2563,-423.327 0|0:218:211,6:211:8352:6:222:0,-45.3757,-730.919 0|0:132:131,0:131:5200:0:0:0,-39.4349,-467.455 0|0:116:115,0:115:4600:0:0:0,-34.6184,-413.521 dDocent_Contig_8948 174 . C T 1669.05 . AB=0.298246;ABP=83.6215;AC=4;AF=0.4;AN=10;AO=68;CIGAR=1X;DP=256;DPB=256;DPRA=2.03571;EPP=150.67;EPPR=411.247;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.984043;PAO=0;PQA=0;PQR=0;PRO=0;QA=2665;QR=7400;RO=188;RPL=68;RPP=150.67;RPPR=411.247;RPR=0;RUN=1;SAF=0;SAP=150.67;SAR=68;SRF=0;SRP=411.247;SRR=188;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1120:0:0:0,-8.42884,-101.084 0/1:72:60,12:60:2349:12:484:-22.2376,0,-189.903 0/1:7:6,1:6:244:1:40:-1.88847,0,-20.2316 0/1:25:22,3:22:870:3:85:-0.402327,0,-71.0844 ./.:.:.:.:.:.:.:. 0/1:124:72,52:72:2817:52:2056:-147.904,0,-216.319 dDocent_Contig_8949 18 . A G 425.902 . AB=0.314815;ABP=19.0953;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=148;DPB=148;DPRA=1.14894;EPP=39.9253;EPPR=287.473;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.117647;PAIREDR=0.59542;PAO=0;PQA=0;PQR=0;PRO=0;QA=681;QR=5240;RO=131;RPL=0;RPP=39.9253;RPPR=287.473;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=131;SRP=287.473;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:475:0:0:0,-3.61236,-43.0979 0/0:30:30,0:30:1202:0:0:0,-9.0309,-108.456 0/0:14:14,0:14:562:0:0:0,-4.21442,-50.9234 0/0:38:38,0:38:1525:0:0:0,-11.4391,-137.493 0/1:24:10,14:10:385:14:561:-43.6079,0,-27.7751 0/1:30:27,3:27:1091:3:120:-2.15641,0,-89.4453 dDocent_Contig_8950 10 . A T 420.148 . AB=0.146154;ABP=144.39;AC=1;AF=0.0833333;AN=12;AO=28;CIGAR=2X2M2X;DP=438;DPB=438;DPRA=0;EPP=63.8115;EPPR=854.227;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=59.0918;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1082;QR=15131;RO=392;RPL=0;RPP=63.8115;RPPR=854.227;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=392;SRP=854.227;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:49:41,2,6:41:1565:2,6:79,236:-7.06844,-12.9093,-140.607,0,-121.796,-126.491 0|0:80:77,3,0:77:2966:3,0:113,0:0,-13.544,-256.519,-23.1793,-257.422,-266.681 0|0:25:23,2,0:23:891:2,0:76,0:0,-0.310939,-73.2479,-6.92369,-73.8499,-80.0824 0|1:81:54,17,10:54:2067:17,10:662,365:-38.1679,0,-164.493,-24.6162,-139.797,-191.196 0|0:96:93,2,0:93:3618:2,0:75,0:0,-21.7306,-318.553,-27.9958,-319.155,-325.297 0|0:107:104,2,1:104:4024:2,1:77,41:0,-25.0012,-354.763,-27.9148,-351.981,-358.002 dDocent_Contig_8951 16 . T C 47.3211 . AB=0.176471;ABP=18.4661;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=299;DPB=299;DPRA=0.301418;EPP=9.52472;EPPR=645.766;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=0;PAIREDR=0.577703;PAO=0;PQA=0;PQR=0;PRO=0;QA=122;QR=11407;RO=296;RPL=0;RPP=9.52472;RPPR=645.766;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=296;SRP=645.766;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:34,0:34:1339:0:0:0,-10.235,-120.778 0/0:32:32,0:32:1244:0:0:0,-9.63296,-112.241 0/0:69:69,0:69:2689:0:0:0,-20.7711,-242.161 0/0:109:109,0:109:4083:0:0:0,-32.8123,-367.501 0/1:17:14,3:14:555:3:122:-6.25498,0,-45.1753 0/0:38:38,0:38:1497:0:0:0,-11.4391,-134.984 dDocent_Contig_8952 11 . A C 33.3431 . AB=0.0967742;ABP=134.349;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=793;DPB=793;DPRA=0.465804;EPP=35.5824;EPPR=1692.42;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.6465;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.677378;PAO=0;PQA=0;PQR=0;PRO=0;QA=601;QR=30862;RO=778;RPL=0;RPP=35.5824;RPPR=1692.42;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=778;SRP=1692.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:87:82,5:82:3227:5:199:0,-7.90155,-271.579 0/1:93:84,9:84:3334:9:361:-4.85698,0,-271.778 0/0:72:71,1:71:2831:1:41:0,-17.5796,-250.51 0/0:77:77,0:77:3039:0:0:0,-23.1793,-273.336 0/0:241:241,0:241:9582:0:0:0,-72.5482,-861.649 0/0:223:223,0:223:8849:0:0:0,-67.1297,-795.892 dDocent_Contig_8953 47 . T A 1820.96 . AB=0.130584;ABP=347.946;AC=2;AF=0.166667;AN=12;AO=44;CIGAR=2X;DP=445;DPB=445;DPRA=0;EPP=98.5551;EPPR=710.937;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.875758;PAO=0;PQA=0;PQR=0;PRO=0;QA=1757;QR=12993;RO=330;RPL=0;RPP=98.5551;RPPR=710.937;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=330;SRP=719.596;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:89:86,1,2:86:3398:1,2:41,81:0,-22.5028,-301.787,-19.2127,-295.408,-298.191 0|1:69:55,9,4:55:2164:9,4:354,160:-12.5991,0,-175.334,-15.9652,-164.862,-192.778 0|0:65:58,5,2:58:2294:5,2:203,81:0,-0.716836,-187.98,-10.7809,-182.806,-198.947 0|1:102:87,10,5:87:3428:10,5:406,198:-7.30184,0,-278.983,-17.2005,-265.698,-297.679 0|0:40:13,11,16:13:505:11,16:434,633:-48.182,-16.3861,-54.5643,0,-5.77699,-36.673 0|0:80:31,8,40:31:1204:8,40:319,1586:-121.235,-104.295,-200.8,0,-72.6519,-86.8846 dDocent_Contig_8955 42 . C A 196.6 . AB=0.222222;ABP=33.1696;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=241;DPB=241;DPRA=0.903614;EPP=26.8965;EPPR=502.449;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.847826;PAO=0;PQA=0;PQR=0;PRO=0;QA=422;QR=9178;RO=230;RPL=0;RPP=26.8965;RPPR=502.449;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=230;SRP=502.449;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:31,0:31:1248:0:0:0,-9.33193,-112.591 0/0:30:29,1:29:1168:1:40:0,-5.03522,-101.401 0/1:45:35,10:35:1380:10:382:-21.1829,0,-110.908 0/0:20:20,0:20:800:0:0:0,-6.0206,-72.3166 0/0:44:44,0:44:1735:0:0:0,-13.2453,-156.375 0/0:71:71,0:71:2847:0:0:0,-21.3731,-256.336 dDocent_Contig_8956 38 . C T 149.5 . AB=0.192308;ABP=45.7716;AC=3;AF=0.25;AN=12;AO=10;CIGAR=1X;DP=84;DPB=84;DPRA=1.625;EPP=24.725;EPPR=163.699;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=379;QR=2949;RO=74;RPL=0;RPP=24.725;RPPR=163.699;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=74;SRP=163.699;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:13:11,2:11:432:2:81:-3.77234,0,-35.3167 0/0:11:11,0:11:443:0:0:0,-3.31133,-40.2257 0/1:18:16,2:16:648:2:72:-1.4181,0,-53.2341 0/1:21:15,6:15:599:6:226:-14.3798,0,-47.9266 0/0:12:12,0:12:477:0:0:0,-3.61236,-43.2816 0/0:9:9,0:9:350:0:0:0,-2.70927,-31.8571 dDocent_Contig_8957 39 . G A 181.982 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=6;CIGAR=5M1X1M;DP=214;DPB=212.714;DPRA=1.93617;EPP=16.0391;EPPR=413.419;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=241;QR=7417;RO=189;RPL=0;RPP=16.0391;RPPR=413.419;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=189;SRP=413.419;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:4:4,0,0,0:4:159:0,0,0:0,0,0:0,-1.20412,-14.6923,-1.20412,-14.6923,-14.6923,-1.20412,-14.6923,-14.6923,-14.6923 0|0:17:16,0,0,1:16:636:0,0,1:0,0,40:0,-4.81648,-57.1783,-4.81648,-57.1783,-57.1783,-1.12183,-53.883,-53.883,-53.582 0|0:74:67,0,2,5:67:2640:0,2,5:0,81,201:0,-20.169,-237.355,-13.489,-230.676,-230.074,-3.60781,-220.792,-214.112,-219.286 0|0:29:23,0,6,0:23:889:0,6,0:0,245,0:-13.6996,-20.6233,-93.6142,0,-73.3942,-71.5881,-20.6233,-93.6142,-73.3942,-93.6142 0|0:47:40,6,0,0:40:1569:6,0,0:240,0,0:-7.72023,0,-127.208,-19.7614,-129.014,-148.785,-19.7614,-129.014,-148.785,-148.785 0|0:43:39,3,1,0:39:1524:3,1,0:115,40,0:0,-2.31629,-126.691,-8.44093,-124.299,-133.433,-11.7402,-127.594,-133.734,-137.03 dDocent_Contig_8958 9 . T G 156.86 . AB=0.110132;ABP=302.702;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=1X;DP=990;DPB=990;DPRA=1.48755;EPP=57.2971;EPPR=2098.48;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9793;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997927;PAO=0;PQA=0;PQR=0;PRO=0;QA=947;QR=36957;RO=965;RPL=0;RPP=57.2971;RPPR=2098.48;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=965;SRP=2098.48;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:84:84,0:84:3238:0:0:0,-25.2865,-291.563 0/0:157:157,0:157:6017:0:0:0,-47.2617,-541.478 0/0:119:119,0:119:4536:0:0:0,-35.8226,-408.073 0/0:128:128,0:128:4925:0:0:0,-38.5318,-443.269 0/0:275:275,0:275:10472:0:0:0,-82.7832,-942.111 0/1:227:202,25:202:7769:25:947:-17.2089,0,-630.684 dDocent_Contig_8959 14 . G A 1477.19 . AB=0.139122;ABP=1214.51;AC=5;AF=0.416667;AN=12;AO=159;CIGAR=1X;DP=1272;DPB=1272;DPRA=0;EPP=41.373;EPPR=5.13495;GTI=0;LEN=1;MEANALT=1;MQM=58.1006;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0440252;PAIREDR=0.0584007;PAO=0;PQA=0;PQR=0;PRO=0;QA=5738;QR=40798;RO=1113;RPL=0;RPP=348.274;RPPR=2419.86;RPR=159;RUN=1;SAF=106;SAP=41.373;SAR=53;SRF=540;SRP=5.13495;SRR=573;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:238:214,24:214:7891:24:838:-3.15184,0,-638.368 0/1:343:298,45:298:10894:45:1625:-41.4671,0,-876.871 0/1:151:119,32:119:4364:32:1210:-62.7457,0,-347.374 0/1:178:154,24:154:5672:24:896:-26.3778,0,-456.878 0/1:161:137,24:137:4966:24:808:-23.1929,0,-398.51 0/0:201:191,10:191:7011:10:361:0,-27.6788,-598.061 dDocent_Contig_8960 14 . G T 468.543 . AB=0.296875;ABP=25.9465;AC=2;AF=0.166667;AN=12;AO=24;CIGAR=1X;DP=260;DPB=260;DPRA=1.08537;EPP=55.1256;EPPR=515.478;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.995763;PAO=0;PQA=0;PQR=0;PRO=0;QA=953;QR=9388;RO=236;RPL=0;RPP=55.1256;RPPR=515.478;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=236;SRP=515.478;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:21,2:21:835:2:81:-0.762044,0,-68.5407 0/0:43:43,0:43:1726:0:0:0,-12.9443,-155.554 0/0:39:39,0:39:1520:0:0:0,-11.7402,-137.036 0/0:55:53,2:53:2119:2:79:0,-9.05902,-183.389 0/1:41:24,17:24:963:17:671:-48.3731,0,-74.628 0/0:59:56,3:56:2225:3:122:0,-6.38828,-189.053 dDocent_Contig_8962 40 . G A 229.033 . AB=0.333333;ABP=10.2485;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=231;DPB=231;DPRA=0.746269;EPP=24.725;EPPR=482.906;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.923077;PAO=0;PQA=0;PQR=0;PRO=0;QA=368;QR=8770;RO=221;RPL=0;RPP=24.725;RPPR=482.906;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=221;SRP=482.906;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:4:4,0:4:162:0:0:0,-1.20412,-14.967 0/0:47:47,0:47:1860:0:0:0,-14.1484,-167.612 0/0:22:22,0:22:862:0:0:0,-6.62266,-77.8868 0/0:60:60,0:60:2387:0:0:0,-18.0618,-214.991 0/1:30:20,10:20:794:10:368:-24.4261,0,-62.745 0/0:68:68,0:68:2705:0:0:0,-20.47,-243.575 dDocent_Contig_8963 25 . G A 44.3119 . AB=0.166667;ABP=20.3821;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=69;DPB=69;DPRA=1.76471;EPP=9.52472;EPPR=146.327;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=122;QR=2637;RO=66;RPL=0;RPP=9.52472;RPPR=146.327;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=66;SRP=146.327;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:355:0:0:0,-2.70927,-32.3113 0/0:9:9,0:9:359:0:0:0,-2.70927,-32.6713 0/0:8:8,0:8:302:0:0:0,-2.40824,-27.5336 0/1:18:15,3:15:610:3:122:-5.95395,0,-49.8193 0/0:3:3,0:3:121:0:0:0,-0.90309,-11.2802 0/0:22:22,0:22:890:0:0:0,-6.62266,-80.4063 dDocent_Contig_8964 9 . T G 95.8218 . AB=0.176471;ABP=33.9218;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=204;DPB=204;DPRA=1;EPP=16.0391;EPPR=432.962;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8636;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=0.5;PAIREDR=0.60101;PAO=0;PQA=0;PQR=0;PRO=0;QA=233;QR=7608;RO=198;RPL=0;RPP=16.0391;RPPR=432.962;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=198;SRP=432.962;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:851:0:0:0,-6.62266,-76.9114 0/0:30:30,0:30:1155:0:0:0,-9.0309,-104.25 0/0:32:32,0:32:1209:0:0:0,-9.63296,-109.098 0/0:46:46,0:46:1778:0:0:0,-13.8474,-159.645 0/0:40:40,0:40:1543:0:0:0,-12.0412,-139.139 0/1:34:28,6:28:1072:6:233:-11.1051,0,-86.549 dDocent_Contig_8965 23 . G T 7786.27 . AB=0.144562;ABP=830.405;AC=1;AF=0.0833333;AN=12;AO=109;CIGAR=1M1X1M;DP=754;DPB=663;DPRA=0;EPP=239.701;EPPR=804.284;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.11022e-16;PAIRED=0.954128;PAIREDR=0.899729;PAO=0;PQA=0;PQR=0;PRO=0;QA=4315;QR=14337;RO=369;RPL=0;RPP=239.701;RPPR=804.284;RPR=109;RUN=1;SAF=109;SAP=239.701;SAR=0;SRF=369;SRP=804.284;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:88:40,35,12:40:1566:35,12:1372,481:-100.768,0,-118.214,-73.179,-89.119,-198.323 0|0:153:68,60,23:68:2612:60,23:2345,924:-172.291,0,-196.321,-116.619,-138.24,-324.079 0|0:98:59,31,8:59:2332:31,8:1196,313:-80.4367,0,-182.573,-72.4617,-166.171,-261.961 0|0:138:44,65,29:44:1696:65,29:2513,1132:-193.13,0,-119.674,-113.332,-46.1972,-243.846 0|0:118:54,59,5:54:2069:59,5:2275,201:-170.516,0,-152.001,-170.207,-153.197,-338.48 0|1:159:104,23,32:104:4062:23,32:887,1264:-72.7064,-31.1889,-358.152,0,-261.067,-324.261 dDocent_Contig_8966 33 . G T 580.89 . AB=0.177778;ABP=165.34;AC=2;AF=0.166667;AN=12;AO=32;CIGAR=1M1X3M;DP=498;DPB=495.4;DPRA=1.17904;EPP=72.4974;EPPR=986.687;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.966887;PAO=0;PQA=0;PQR=0;PRO=0;QA=1268;QR=17401;RO=453;RPL=0;RPP=72.4974;RPPR=986.687;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=453;SRP=986.687;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:88:87,1,0:87:3316:1,0:41,0:0,-22.3961,-294.456,-26.1896,-294.757,-298.141 0|0:89:80,9,0:80:3114:9,0:324,0:-2.70354,0,-253.59,-26.7859,-256.299,-282.722 0|0:55:55,0,0:55:2152:0,0:0,0:0,-16.5566,-193.88,-16.5566,-193.88,-193.88 0|0:86:83,3,0:83:3158:3,0:117,0:0,-14.9784,-273.444,-24.9855,-274.347,-283.965 0|1:82:67,0,15:67:2544:0,15:0,587:-28.4727,-48.6417,-257.214,0,-208.961,-204.445 0|1:98:81,0,17:81:3117:0,17:0,681:-32.1206,-56.504,-312.375,0,-256.268,-251.151 dDocent_Contig_8967 8 . T A 438.22 . AB=0.167665;ABP=163.218;AC=1;AF=0.0833333;AN=12;AO=28;CIGAR=1X;DP=550;DPB=550;DPRA=2.18016;EPP=63.8115;EPPR=1130;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99422;PAO=0;PQA=0;PQR=0;PRO=0;QA=1059;QR=19879;RO=519;RPL=0;RPP=63.8115;RPPR=1130;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=519;SRP=1130;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:57:57,0:57:2197:0:0:0,-17.1587,-197.953 0/0:56:56,0:56:2156:0:0:0,-16.8577,-194.267 0/0:58:58,0:58:2219:0:0:0,-17.4597,-199.931 0/0:71:71,0:71:2729:0:0:0,-21.3731,-245.794 0/0:141:138,0:138:5257:0:0:0,-41.5421,-472.748 0/1:167:139,28:139:5321:28:1059:-45.3449,0,-428.614 dDocent_Contig_8970 14 . T A 13853 . AB=0.242389;ABP=495.279;AC=6;AF=0.5;AN=12;AO=207;CIGAR=1X3M1X4M5D1M;DP=854;DPB=657.667;DPRA=0;EPP=452.505;EPPR=181.071;GTI=0;LEN=1;MEANALT=6.83333;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=2.22045e-16;PAIRED=0.956522;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7804;QR=3218;RO=82;RPL=0;RPP=452.505;RPPR=181.071;RPR=207;RUN=1;SAF=207;SAP=452.505;SAR=0;SRF=82;SRP=181.071;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:108:20,13,30,0,31,9:20:791:13,30,0,31,9:519,1163,0,1206,349:-123.533,-86.8082,-147.993,-34.0093,-56.3618,-90.0765,-129.554,-151.907,-99.1074,-194.652,-30.445,-52.7976,0,-95.5433,-86.2114,-100.882,-123.234,-70.4353,-165.98,-66.8712,-163.27 1|0:167:19,14,17,4,63,41:19:751:14,17,4,63,41:543,660,137,2366,1538:-252.231,-213.345,-270.933,-203.724,-220.921,-260.409,-246.832,-264.029,-254.408,-307.43,-64.1466,-81.3448,-71.724,-114.832,-106.985,-131.996,-149.194,-139.573,-182.681,0,-181.457 1|1:102:9,11,22,11,32,16:9:347:11,22,11,32,16:445,873,405,1190,574:-138.053,-104.068,-129.249,-68.8901,-60.6873,-90.7597,-107.652,-99.4498,-64.2718,-132.832,-43.3814,-35.1784,0,-38.7639,-62.2397,-93.9629,-85.7606,-50.5829,-89.3447,-25.0765,-117.637 1|0:178:13,21,22,6,60,38:13:507:21,22,6,60,38:839,859,225,2256,1420:-255.468,-190.277,-225.63,-188.767,-161.337,-223.819,-240.953,-213.523,-212.013,-280.821,-74.5792,-47.1488,-45.6392,-97.8248,-98.1918,-143.125,-115.695,-114.185,-166.371,0,-173.36 0|0:169:9,33,26,0,15,85:9:348:33,26,0,15,85:1313,1001,0,571,3225:-341.229,-235.829,-254.478,-261.756,-182.229,-282.511,-343.938,-264.412,-290.338,-372.52,-297.104,-217.577,-243.504,-325.686,-321.171,-79.5299,0,-25.9312,-108.112,-61.279,-82.5241 0|0:130:12,57,4,1,6,46:12:474:57,4,1,6,46:2274,152,37,215,1726:-286.008,-102.334,-124.183,-277.156,-128.877,-314.957,-286.594,-138.315,-313.134,-325.298,-272.09,-123.812,-298.631,-308.068,-309.289,-148.28,0,-174.82,-184.258,-169.756,-173.437 dDocent_Contig_8971 12 . G T 540.813 . AB=0.208;ABP=95.5845;AC=2;AF=0.166667;AN=12;AO=32;CIGAR=3M1X1M;DP=391;DPB=392.6;DPRA=1.10246;EPP=72.4974;EPPR=758.683;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.968391;PAO=0;PQA=0;PQR=0;PRO=0;QA=1291;QR=13516;RO=348;RPL=0;RPP=72.4974;RPPR=758.683;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=348;SRP=758.683;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:49:48,0,0:48:1859:0,0:0,0:0,-14.4494,-167.43,-14.4494,-167.43,-167.43 0|1:70:48,0,21:48:1863:0,21:0,846:-55.5585,-70.0079,-223.073,0,-153.338,-147.016 0|1:55:50,0,5:50:1961:0,5:0,200:-1.82289,-16.8744,-178.134,0,-161.658,-160.153 0|0:80:74,0,5:74:2878:0,5:0,205:0,-22.2762,-258.764,-5.33932,-241.842,-240.337 0|0:64:60,3,1:60:2342:3,1:118,40:0,-8.36029,-199.969,-14.7651,-197.577,-206.982 0|0:73:68,5,0:68:2613:5,0:193,0:0,-4.23383,-217.609,-20.47,-219.114,-234.965 dDocent_Contig_8972 10 . T G 71.7004 . AB=0.16129;ABP=33.9012;AC=1;AF=0.1;AN=10;AO=5;CIGAR=1X;DP=139;DPB=139;DPRA=1.14815;EPP=13.8677;EPPR=293.988;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=197;QR=5189;RO=134;RPL=0;RPP=13.8677;RPPR=293.988;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=134;SRP=293.988;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:649:0:0:0,-5.11751,-58.7397 0/0:39:39,0:39:1508:0:0:0,-11.7402,-135.982 0/0:37:37,0:37:1439:0:0:0,-11.1381,-129.775 0/1:31:26,5:26:996:5:197:-8.7721,0,-80.6125 0/0:15:15,0:15:597:0:0:0,-4.51545,-54.07 ./.:.:.:.:.:.:.:. dDocent_Contig_8973 158 . C T 157.322 . AB=0.15625;ABP=101.541;AC=3;AF=0.25;AN=12;AO=15;CIGAR=1X;DP=164;DPB=164;DPRA=1.41176;EPP=35.5824;EPPR=326.56;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=542;QR=5649;RO=149;RPL=15;RPP=35.5824;RPPR=326.56;RPR=0;RUN=1;SAF=0;SAP=35.5824;SAR=15;SRF=0;SRP=326.56;SRR=149;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:8:8,0:8:303:0:0:0,-2.40824,-27.627 0/1:27:22,5:22:855:5:190:-9.33864,0,-69.14 0/0:46:46,0:46:1750:0:0:0,-13.8474,-157.746 0/1:65:57,8:57:2147:8:275:-5.51031,0,-173.873 0/0:14:14,0:14:517:0:0:0,-4.21442,-46.8596 0/1:4:2,2:2:77:2:77:-6.10502,0,-6.10502 dDocent_Contig_8974 21 . G A 1664.28 . AB=0.219101;ABP=246.996;AC=4;AF=0.333333;AN=12;AO=85;CIGAR=1X;DP=618;DPB=618;DPRA=0;EPP=187.585;EPPR=1160.41;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992495;PAO=0;PQA=0;PQR=0;PRO=0;QA=3376;QR=20974;RO=533;RPL=0;RPP=187.585;RPPR=1160.41;RPR=85;RUN=1;SAF=85;SAP=187.585;SAR=0;SRF=533;SRP=1160.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:82:65,17:65:2513:17:680:-36.8472,0,-201.639 0/1:104:77,27:77:2973:27:1085:-66.6313,0,-236.368 0/1:90:74,16:74:2947:16:632:-30.1202,0,-238.231 0/1:80:62,18:62:2440:18:709:-40.0513,0,-195.678 0/0:113:110,3:110:4376:3:121:0,-22.7362,-382.513 0/0:149:145,4:145:5725:4:149:0,-31.0852,-501.315 dDocent_Contig_8975 35 . A G 51.4201 . AB=0.131579;ABP=47.8112;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=156;DPB=156;DPRA=1.61017;EPP=13.8677;EPPR=330.903;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.97351;PAO=0;PQA=0;PQR=0;PRO=0;QA=197;QR=6034;RO=151;RPL=0;RPP=13.8677;RPPR=330.903;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=151;SRP=330.903;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:48,0:48:1897:0:0:0,-14.4494,-170.938 0/0:30:30,0:30:1189:0:0:0,-9.0309,-107.283 0/0:18:18,0:18:724:0:0:0,-5.41854,-65.4857 0/1:38:33,5:33:1330:5:197:-6.66489,0,-108.521 0/0:9:9,0:9:365:0:0:0,-2.70927,-33.2151 0/0:13:13,0:13:529:0:0:0,-3.91339,-47.9569 dDocent_Contig_8976 12 . G T 310.22 . AB=0.235294;ABP=44.396;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=731;DPB=731;DPRA=0.944149;EPP=39.9253;EPPR=1553.44;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9958;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995798;PAO=0;PQA=0;PQR=0;PRO=0;QA=617;QR=28141;RO=714;RPL=0;RPP=39.9253;RPPR=1553.44;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=714;SRP=1553.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:24,10:24:947:10:365:-22.9576,0,-75.3019 0/1:34:28,6:28:1117:6:235:-11.2863,0,-90.583 0/0:53:53,0:53:2111:0:0:0,-15.9546,-190.176 0/0:122:122,0:122:4782:0:0:0,-36.7257,-430.317 0/0:201:201,0:201:7969:0:0:0,-60.507,-716.82 0/0:287:286,1:286:11215:1:17:0,-84.6956,-1006.97 dDocent_Contig_8978 98 . N A 573.753 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=22;CIGAR=1X;DP=22;DPB=22;DPRA=0;EPP=50.7827;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=615;QR=0;RO=0;RPL=22;RPP=50.7827;RPPR=0;RPR=0;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:121:-11.1907,-1.20412,0 1/1:8:0,8:0:0:8:247:-22.5331,-2.40824,0 1/1:3:0,3:0:0:3:39:-3.63987,-0.90309,0 1/1:4:0,4:0:0:4:117:-10.8207,-1.20412,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:91:-8.49155,-0.90309,0 dDocent_Contig_8979 34 . A C 40.5822 . AB=0.157895;ABP=22.325;AC=2;AF=0.166667;AN=12;AO=4;CIGAR=1X;DP=91;DPB=91;DPRA=0.568966;EPP=11.6962;EPPR=191.928;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=161;QR=3482;RO=87;RPL=0;RPP=11.6962;RPPR=191.928;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=87;SRP=191.928;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:11:11,0:11:437:0:0:0,-3.31133,-39.6803 0/0:26:26,0:26:1033:0:0:0,-7.82678,-93.2645 0/0:14:13,1:13:512:1:39:0,-0.317855,-42.5273 0/0:21:21,0:21:850:0:0:0,-6.32163,-76.812 0/1:12:11,1:11:446:1:41:-0.482207,0,-36.8832 0/1:7:5,2:5:204:2:81:-5.57852,0,-16.6368 dDocent_Contig_8980 38 . A T 798.807 . AB=0.131631;ABP=602.938;AC=2;AF=0.166667;AN=12;AO=70;CIGAR=1X;DP=1127;DPB=1127;DPRA=1.32371;EPP=155.013;EPPR=2291.74;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.973435;PAO=0;PQA=0;PQR=0;PRO=0;QA=2739;QR=41577;RO=1054;RPL=0;RPP=155.013;RPPR=2291.74;RPR=70;RUN=1;SAF=70;SAP=155.013;SAR=0;SRF=1054;SRP=2291.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:133:130,3:130:5102:3:119:0,-28.9425,-447.976 0/1:273:239,34:239:9431:34:1336:-38.325,0,-766.076 0/0:56:55,0:55:2161:0:0:0,-16.5566,-194.372 0/1:236:203,33:203:8050:33:1284:-44.7776,0,-653.059 0/0:209:208,0:208:8213:0:0:0,-62.6142,-738.358 0/0:220:219,0:219:8620:0:0:0,-65.9256,-775.235 dDocent_Contig_8981 7 . A T 48.7206 . AB=0.1875;ABP=16.582;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=209;DPB=209;DPRA=0.786667;EPP=11.6962;EPPR=448.162;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9415;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.960976;PAO=0;PQA=0;PQR=0;PRO=0;QA=156;QR=7817;RO=205;RPL=0;RPP=11.6962;RPPR=448.162;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=205;SRP=448.162;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:13,3:13:500:3:117:-6.0939,0,-40.5313 0/0:21:21,0:21:791:0:0:0,-6.32163,-71.4912 0/0:43:42,1:42:1632:1:39:0,-9.04772,-143.245 0/0:17:17,0:17:656:0:0:0,-5.11751,-59.377 0/0:72:72,0:72:2726:0:0:0,-21.6742,-245.532 0/0:40:40,0:40:1512:0:0:0,-12.0412,-136.352 dDocent_Contig_8982 47 . C A 36.8876 . AB=0.166667;ABP=20.3821;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=133;DPB=133;DPRA=0.782609;EPP=9.52472;EPPR=285.302;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.730769;PAO=0;PQA=0;PQR=0;PRO=0;QA=114;QR=5139;RO=130;RPL=0;RPP=9.52472;RPPR=285.302;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=130;SRP=285.302;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:11:11,0:11:443:0:0:0,-3.31133,-40.2252 0/0:24:24,0:24:919:0:0:0,-7.22472,-83.0049 0/0:18:18,0:18:715:0:0:0,-5.41854,-64.6747 0/0:48:48,0:48:1915:0:0:0,-14.4494,-172.552 0/0:14:14,0:14:558:0:0:0,-4.21442,-50.563 0/1:18:15,3:15:589:3:114:-5.21155,0,-47.9253 dDocent_Contig_8983 124 . A G 125.301 . AB=0.212766;ABP=36.6912;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=315;DPB=315;DPRA=0.876866;EPP=24.725;EPPR=665.309;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=310;QR=10241;RO=305;RPL=0;RPP=24.725;RPPR=665.309;RPR=10;RUN=1;SAF=0;SAP=24.725;SAR=10;SRF=0;SRP=665.309;SRR=305;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:754:0:0:0,-6.62266,-68.1781 0/0:36:36,0:36:1231:0:0:0,-10.8371,-111.092 0/0:66:66,0:66:2199:0:0:0,-19.868,-198.176 0/0:82:82,0:82:2738:0:0:0,-24.6845,-246.668 0/1:47:37,10:37:1260:10:310:-14.053,0,-99.5493 0/0:62:62,0:62:2059:0:0:0,-18.6639,-185.576 dDocent_Contig_8985 158 . C T 114.976 . AB=0.181818;ABP=41.702;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=235;DPB=235;DPRA=1.15183;EPP=20.3821;EPPR=487.287;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.986784;PAO=0;PQA=0;PQR=0;PRO=0;QA=288;QR=7904;RO=227;RPL=8;RPP=20.3821;RPPR=487.287;RPR=0;RUN=1;SAF=0;SAP=20.3821;SAR=8;SRF=0;SRP=495.935;SRR=227;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:36,0:36:1217:0:0:0,-10.8371,-109.817 0/0:35:35,0:35:1202:0:0:0,-10.536,-108.465 0/0:87:87,0:87:3021:0:0:0,-26.1896,-272.087 0/1:44:36,8:36:1268:8:288:-13.0205,0,-101.166 0/0:7:7,0:7:263:0:0:0,-2.10721,-24.0278 0/0:26:26,0:26:933:0:0:0,-7.82678,-84.2793 dDocent_Contig_8986 8 . T G 1337.33 . AB=0.0584192;ABP=988.739;AC=4;AF=0.333333;AN=12;AO=39;CIGAR=1X1M1X4M;DP=964;DPB=964.143;DPRA=0;EPP=87.6977;EPPR=1692.42;GTI=0;LEN=1;MEANALT=5.16667;MQM=60;MQMR=59.9717;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.993573;PAO=0;PQA=0;PQR=0;PRO=0;QA=1460;QR=29625;RO=778;RPL=0;RPP=87.6977;RPPR=1692.42;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=778;SRP=1692.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:132:104,2,17,7:104:3935:2,17,7:78,658,258:-22.753,-47.6479,-369.608,0,-316.156,-317.45,-32.9667,-349.113,-301.47,-353.417 0|1:190:123,7,35,11:123:4725:7,35,11:279,1319,421:-71.0542,-85.1021,-470.871,0,-364.898,-377.339,-73.5307,-438.429,-353.325,-458.095 0|1:89:66,6,3,10:66:2465:6,3,10:239,116,379:-11.2031,-11.3845,-211.385,-21.5423,-203.663,-222.443,0,-182.116,-192.271,-198.789 0|1:171:134,3,25,6:134:5104:3,25,6:119,932,222:-35.9449,-66.4851,-484.239,0,-408.853,-411.123,-58.1224,-466.981,-400.488,-474.971 0|0:198:182,2,13,1:182:6978:2,13,1:79,504,39:0,-48.2856,-620.39,-13.3837,-579.583,-582.171,-51.5815,-617.786,-582.879,-623.986 0|0:184:169,0,10,4:169:6418:0,10,4:0,374,141:0,-50.8741,-577.127,-20.2438,-546.504,-543.493,-39.4014,-565.649,-535.025,-564.444 dDocent_Contig_8987 19 . A G 1626.44 . AB=0.266932;ABP=121.438;AC=1;AF=0.0833333;AN=12;AO=126;CIGAR=1X;DP=3081;DPB=3081;DPRA=0.95619;EPP=276.616;EPPR=6417.54;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5015;QR=117346;RO=2954;RPL=0;RPP=276.616;RPPR=6417.54;RPR=126;RUN=1;SAF=126;SAP=276.616;SAR=0;SRF=2954;SRP=6417.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:641:641,0:641:25411:0:0:0,-192.96,-2284.79 0/0:543:543,0:543:21586:0:0:0,-163.459,-1940.93 0/0:391:391,0:391:15499:0:0:0,-117.703,-1393.72 0/0:871:833,38:833:33131:38:1509:0,-126.141,-2842.73 0/1:251:183,67:183:7243:67:2661:-164.167,0,-576.1 0/0:384:363,21:363:14476:21:845:0,-39.2334,-1225.37 dDocent_Contig_8989 12 . C T 1453.19 . AB=0.234756;ABP=203.448;AC=6;AF=0.5;AN=12;AO=77;CIGAR=1X;DP=328;DPB=328;DPRA=0;EPP=170.214;EPPR=480.777;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.749;NS=6;NUMALT=1;ODDS=0;PAIRED=0.350649;PAIREDR=0.513944;PAO=0;PQA=0;PQR=0;PRO=0;QA=2812;QR=9922;RO=251;RPL=0;RPP=170.214;RPPR=548.05;RPR=77;RUN=1;SAF=77;SAP=170.214;SAR=0;SRF=243;SRP=480.777;SRR=8;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:39:32,7:32:1267:7:239:-10.1007,0,-102.55 0/1:83:68,15:68:2669:15:571:-26.7461,0,-215.195 0/1:52:39,13:39:1560:13:480:-27.8879,0,-124.974 0/1:64:57,7:57:2240:7:231:-1.84549,0,-182.456 0/1:26:15,11:15:582:11:401:-28.607,0,-44.8782 0/1:64:40,24:40:1604:24:890:-61.1514,0,-125.317 dDocent_Contig_8990 9 . G A 64.6733 . AB=0.151515;ABP=37.8197;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=664;DPB=664;DPRA=0.515152;EPP=16.0391;EPPR=1431.84;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=234;QR=25049;RO=658;RPL=0;RPP=16.0391;RPPR=1431.84;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=658;SRP=1431.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:103:102,1:102:3860:1:39:0,-27.1095,-343.614 0/0:163:163,0:163:6209:0:0:0,-49.0679,-558.734 0/0:103:103,0:103:3915:0:0:0,-31.0061,-352.447 0/0:131:131,0:131:4982:0:0:0,-39.4349,-448.411 0/1:33:28,5:28:1078:5:195:-7.99021,0,-87.3908 0/0:131:131,0:131:5005:0:0:0,-39.4349,-450.475 dDocent_Contig_8991 13 . A T 374.896 . AB=0.246377;ABP=41.5618;AC=2;AF=0.166667;AN=12;AO=18;CIGAR=1X;DP=281;DPB=281;DPRA=0.672619;EPP=42.0968;EPPR=574.108;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.946768;PAO=0;PQA=0;PQR=0;PRO=0;QA=715;QR=10500;RO=263;RPL=0;RPP=42.0968;RPPR=574.108;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=263;SRP=574.108;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:27:15,12:15:581:12:470:-34.5197,0,-44.5018 0/0:44:43,1:43:1739:1:40:0,-9.24964,-152.726 0/0:37:37,0:37:1488:0:0:0,-11.1381,-134.166 0/1:42:37,5:37:1464:5:205:-6.19175,0,-119.36 0/0:52:52,0:52:2069:0:0:0,-15.6536,-186.397 0/0:79:79,0:79:3159:0:0:0,-23.7814,-284.385 dDocent_Contig_8992 13 . A T 22272.5 . AB=0.378265;ABP=126.194;AC=7;AF=0.583333;AN=12;AO=702;CIGAR=1X;DP=1297;DPB=1297;DPRA=0;EPP=1527.38;EPPR=1292.86;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.99;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=28056;QR=23695;RO=594;RPL=0;RPP=1527.38;RPPR=1292.86;RPR=702;RUN=1;SAF=702;SAP=1527.38;SAR=0;SRF=594;SRP=1292.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:153:110,43:110:4402:43:1736:-110.401,0,-350.065 0/1:156:131,25:131:5213:25:1016:-44.7714,0,-422.082 0/1:180:154,26:154:6139:26:1042:-39.8883,0,-498.091 0/1:176:155,21:155:6173:21:836:-22.5715,0,-502.35 0/1:292:44,247:44:1768:247:9889:-801.499,0,-71.4725 1/1:340:0,340:0:0:340:13537:-1217.34,-102.35,0 dDocent_Contig_8993 27 . T A 4265.39 . AB=0.240437;ABP=431.372;AC=4;AF=0.333333;AN=12;AO=177;CIGAR=4M1X3M;DP=1161;DPB=1158;DPRA=0;EPP=387.361;EPPR=1948.65;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.985491;PAO=0;PQA=0;PQR=0;PRO=0;QA=6982;QR=35225;RO=896;RPL=0;RPP=387.361;RPPR=1948.65;RPR=177;RUN=1;SAF=177;SAP=387.361;SAR=0;SRF=896;SRP=1948.65;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:136:88,0,23,22:88:3463:0,23,22:0,891,864:-46.699,-73.1896,-358.066,0,-284.881,-277.958,-2.12658,-287.011,-213.826,-280.388 0|1:135:93,0,35,6:93:3667:0,35,6:0,1405,241:-87.8064,-115.802,-417.505,0,-301.736,-291.2,-95.9422,-397.646,-281.877,-395.84 0|1:161:99,0,54,5:99:3892:0,54,5:0,2140,194:-146.4,-176.202,-496.32,0,-320.192,-303.937,-160.265,-480.383,-304.255,-478.878 0|1:300:223,0,64,12:223:8780:0,64,12:0,2506,469:-138.894,-206.024,-928.297,0,-722.275,-703.009,-167.47,-889.743,-683.721,-886.13 0|0:178:147,12,0,18:147:5769:12,0,18:464,0,730:-15.9608,-22.4144,-493.236,-60.2122,-496.849,-534.654,0,-436.647,-474.452,-469.034 0|0:251:246,0,1,2:246:9654:0,1,2:0,40,81:0,-74.0534,-868.005,-70.7518,-864.71,-864.409,-67.3536,-861.326,-858.031,-860.724 dDocent_Contig_8994 12 . T C 48.9716 . AB=0.137931;ABP=36.0317;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=133;DPB=133;DPRA=1.39423;EPP=11.6962;EPPR=188.595;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.658915;PAO=0;PQA=0;PQR=0;PRO=0;QA=164;QR=5131;RO=129;RPL=0;RPP=11.6962;RPPR=283.13;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=117;SRP=188.595;SRR=12;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:772:0:0:0,-5.71957,-69.7993 0/0:22:22,0:22:872:0:0:0,-6.62266,-78.7913 0/0:11:11,0:11:441:0:0:0,-3.31133,-40.0457 0/0:24:24,0:24:960:0:0:0,-7.22472,-86.6945 0/0:28:28,0:28:1116:0:0:0,-8.42884,-100.719 0/1:29:25,4:25:970:4:164:-6.42003,0,-78.8596 dDocent_Contig_8995 63 . G A 497.772 . AB=0.888889;ABP=26.6552;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=182;DPB=182;DPRA=0.54878;EPP=37.7539;EPPR=363.475;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=626;QR=6522;RO=166;RPL=16;RPP=37.7539;RPPR=363.475;RPR=0;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=166;SRP=363.475;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:471:0:0:0,-3.61236,-42.7404 0/1:18:2,16:2:80:16:626:-51.254,0,-2.17325 0/0:41:41,0:41:1613:0:0:0,-12.3422,-145.408 0/0:36:36,0:36:1419:0:0:0,-10.8371,-127.969 0/0:53:53,0:53:2080:0:0:0,-15.9546,-187.401 0/0:22:22,0:22:859:0:0:0,-6.62266,-77.6228 dDocent_Contig_8996 21 . T C 253.513 . AB=0.191781;ABP=63.2463;AC=3;AF=0.25;AN=12;AO=19;CIGAR=1X;DP=221;DPB=221;DPRA=1.06286;EPP=44.2683;EPPR=407.592;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=58.8515;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.960396;PAO=0;PQA=0;PQR=0;PRO=0;QA=753;QR=8008;RO=202;RPL=0;RPP=44.2683;RPPR=441.648;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=198;SRP=407.592;SRR=4;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:44:40,4:40:1565:4:147:-0.337004,0,-125.669 0/0:42:39,3:39:1500:3:118:0,-1.64168,-124.235 0/0:71:69,2:69:2770:2:82:0,-13.5935,-241.626 0/0:35:35,0:35:1403:0:0:0,-10.536,-124.97 0/1:5:3,2:3:123:2:80:-6.08642,0,-9.95964 0/1:24:16,8:16:647:8:326:-22.4851,0,-49.4613 dDocent_Contig_8997 124 . C A 37.2929 . AB=0.12069;ABP=75.4926;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=338;DPB=338;DPRA=1.20707;EPP=33.4109;EPPR=702.224;GTI=0;LEN=1;MEANALT=1.25;MQM=50.2857;MQMR=48.1832;NS=6;NUMALT=1;ODDS=0;PAIRED=0.642857;PAIREDR=0.677019;PAO=0;PQA=0;PQR=0;PRO=0;QA=497;QR=10535;RO=322;RPL=0;RPP=33.4109;RPPR=702.224;RPR=14;RUN=1;SAF=0;SAP=33.4109;SAR=14;SRF=0;SRP=702.224;SRR=322;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:49:48,1:48:1549:1:35:0,-11.277,-128.796 0/0:54:53,0:53:1757:0:0:0,-15.9546,-150.447 0/1:58:50,7:50:1663:7:248:-5.25209,0,-125.942 0/0:67:64,3:64:2121:3:107:0,-10.3171,-155.422 0/0:65:62,3:62:1990:3:107:0,-9.66857,-154.352 0/0:45:45,0:45:1455:0:0:0,-13.5463,-106.812 dDocent_Contig_8998 79 . A G 1399.27 . AB=0.604651;ABP=11.1912;AC=5;AF=0.416667;AN=12;AO=63;CIGAR=1X;DP=160;DPB=160;DPRA=2.70909;EPP=139.813;EPPR=213.643;GTI=0;LEN=1;MEANALT=1;MQM=59.873;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2041;QR=3075;RO=97;RPL=63;RPP=139.813;RPPR=213.643;RPR=0;RUN=1;SAF=63;SAP=139.813;SAR=0;SRF=97;SRP=213.643;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:20,3:20:631:3:75:-0.0737507,0,-50.1648 0/0:57:52,5:52:1690:5:175:0,-1.06501,-136.284 0/1:18:7,11:7:203:11:348:-26.209,0,-13.1366 0/0:11:11,0:11:323:0:0:0,-3.31133,-29.3553 1/1:6:0,6:0:0:6:198:-18.1443,-1.80618,0 0/1:45:7,38:7:228:38:1245:-98.7946,0,-7.29296 dDocent_Contig_8999 14 . A T 470.406 . AB=0.146919;ABP=231.488;AC=1;AF=0.0833333;AN=12;AO=85;CIGAR=1X;DP=1364;DPB=1364;DPRA=0;EPP=187.585;EPPR=2778.15;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=59.957;NS=6;NUMALT=1;ODDS=0;PAIRED=0.552941;PAIREDR=0.969484;PAO=0;PQA=0;PQR=0;PRO=0;QA=3409;QR=50563;RO=1278;RPL=0;RPP=187.585;RPPR=2778.15;RPR=85;RUN=1;SAF=85;SAP=187.585;SAR=0;SRF=1278;SRP=2778.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:211:180,31:180:7124:31:1239:-48.2625,0,-577.324 0/0:268:252,16:252:9922:16:651:0,-21.7535,-833.466 0/0:165:161,4:161:6378:4:164:0,-34.52,-558.625 0/0:426:398,28:398:15772:28:1118:0,-27.331,-1317.4 0/0:161:158,2:158:6277:2:74:0,-41.5304,-557.504 0/0:133:129,4:129:5090:4:163:0,-24.9786,-442.945 dDocent_Contig_9000 98 . N T 510.903 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=16;CIGAR=1X;DP=16;DPB=16;DPRA=0;EPP=37.7539;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=15.6955;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=564;QR=0;RO=0;RPL=16;RPP=37.7539;RPPR=0;RPR=0;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:16:0,16:0:0:16:564:-51.0903,-4.81648,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_9001 55 . T C 8710.09 . AB=0.495908;ABP=3.09915;AC=6;AF=0.5;AN=12;AO=303;CIGAR=1X;DP=611;DPB=611;DPRA=0;EPP=660.966;EPPR=671.824;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.785479;PAIREDR=0.811688;PAO=0;PQA=0;PQR=0;PRO=0;QA=11833;QR=11707;RO=308;RPL=303;RPP=660.966;RPPR=671.824;RPR=0;RUN=1;SAF=303;SAP=660.966;SAR=0;SRF=308;SRP=671.824;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:72:26,46:26:972:46:1790:-139.642,0,-66.1084 0/1:124:60,64:60:2313:64:2540:-191.413,0,-171.029 0/1:70:44,26:44:1682:26:1042:-73.0024,0,-130.548 0/1:119:54,65:54:2066:65:2491:-188.509,0,-150.343 0/1:88:46,42:46:1722:42:1638:-121.16,0,-128.733 0/1:138:78,60:78:2952:60:2332:-168.505,0,-224.271 dDocent_Contig_9002 54 . C T 153.518 . AB=0.15942;ABP=72.5289;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=229;DPB=229;DPRA=0.8625;EPP=26.8965;EPPR=476.391;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.889908;PAO=0;PQA=0;PQR=0;PRO=0;QA=429;QR=8697;RO=218;RPL=11;RPP=26.8965;RPPR=476.391;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=218;SRP=476.391;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1391:0:0:0,-10.536,-125.44 0/0:47:47,0:47:1862:0:0:0,-14.1484,-167.783 0/0:47:47,0:47:1896:0:0:0,-14.1484,-170.837 0/0:31:31,0:31:1231:0:0:0,-9.33193,-111.064 0/1:26:22,4:22:874:4:153:-6.31117,0,-71.1395 0/1:43:36,7:36:1443:7:276:-12.2625,0,-117.173 dDocent_Contig_9003 7 . A T 121.332 . AB=0.142857;ABP=88.3181;AC=2;AF=0.166667;AN=12;AO=27;CIGAR=3X;DP=409;DPB=409;DPRA=0.900685;EPP=61.6401;EPPR=832.513;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1025;QR=14455;RO=382;RPL=0;RPP=61.6401;RPPR=832.513;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=382;SRP=832.513;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:21:18,3:18:679:3:114:-4.31059,0,-55.122 0|1:56:48,8:48:1796:8:306:-11.0436,0,-145.044 0|0:128:117,11:117:4436:11:420:0,-0.379241,-361.169 0|0:58:53,5:53:2008:5:185:0,-0.450957,-163.956 0|0:55:55,0:55:2097:0:0:0,-16.5566,-188.966 0|0:91:91,0:91:3439:0:0:0,-27.3937,-309.663 dDocent_Contig_9004 44 . C T 129.147 . AB=0.26087;ABP=14.4341;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=191;DPB=191;DPRA=1.13115;EPP=20.3821;EPPR=400.39;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.73224;PAO=0;PQA=0;PQR=0;PRO=0;QA=312;QR=7308;RO=183;RPL=0;RPP=20.3821;RPPR=400.39;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=183;SRP=400.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:17,6:17:662:6:230:-14.1366,0,-52.9772 0/0:22:22,0:22:862:0:0:0,-6.62266,-77.8835 0/0:24:24,0:24:981:0:0:0,-7.22472,-88.5839 0/0:46:44,2:44:1769:2:82:0,-6.0677,-151.642 0/0:32:32,0:32:1276:0:0:0,-9.63296,-115.104 0/0:44:44,0:44:1758:0:0:0,-13.2453,-158.441 dDocent_Contig_9005 36 . T C 177.269 . AB=0.126866;ABP=165.06;AC=3;AF=0.25;AN=12;AO=17;CIGAR=1X;DP=258;DPB=258;DPRA=1.08065;EPP=39.9253;EPPR=500.602;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.705882;PAIREDR=0.39834;PAO=0;PQA=0;PQR=0;PRO=0;QA=682;QR=9298;RO=241;RPL=0;RPP=39.9253;RPPR=526.335;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=238;SRP=500.602;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:45:41,4:41:1606:4:160:-1.23708,0,-131.246 0/1:65:57,8:57:2167:8:321:-9.69059,0,-175.668 0/1:24:19,5:19:735:5:201:-11.2458,0,-59.2527 0/0:40:40,0:40:1541:0:0:0,-12.0412,-138.948 0/0:43:43,0:43:1648:0:0:0,-12.9443,-148.563 0/0:41:41,0:41:1601:0:0:0,-12.3422,-144.342 dDocent_Contig_9006 9 . G A 211.641 . AB=0.236842;ABP=25.8679;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1M1X1M;DP=121;DPB=119.333;DPRA=0.791667;EPP=22.5536;EPPR=226.672;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=340;QR=3959;RO=103;RPL=0;RPP=22.5536;RPPR=226.672;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=103;SRP=226.672;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:15:11,2,0,1:11:425:2,0,1:78,0,40:-3.09795,0,-34.2972,-6.40928,-34.8993,-41.3113,-3.11172,-31.6032,-38.0154,-37.7144 0|1:22:14,2,6,0:14:531:2,6,0:78,223,0:-14.0211,-11.8192,-54.7628,0,-37.1179,-41.7248,-18.2355,-55.3648,-43.5309,-61.7777 0|0:20:17,0,0,3:17:663:0,0,3:0,0,120:-5.16709,-10.2846,-64.7761,-10.2846,-64.7761,-64.7761,0,-54.8896,-54.8896,-53.9865 0|1:16:13,0,3,0:13:499:0,3,0:0,117,0:-6.0939,-10.0073,-50.9626,0,-41.3438,-40.4407,-10.0073,-50.9626,-41.3438,-50.9626 0|0:28:28,0,0,0:28:1072:0,0,0:0,0,0:0,-8.42884,-96.786,-8.42884,-96.786,-96.786,-8.42884,-96.786,-96.786,-96.786 0|0:20:20,0,0,0:20:769:0,0,0:0,0,0:0,-6.0206,-69.5384,-6.0206,-69.5384,-69.5384,-6.0206,-69.5384,-69.5384,-69.5384 dDocent_Contig_9007 108 . G T 257.58 . AB=0.175258;ABP=91.8616;AC=4;AF=0.333333;AN=12;AO=18;CIGAR=1X;DP=142;DPB=142;DPRA=1.47059;EPP=42.0968;EPPR=272.273;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.758065;PAO=0;PQA=0;PQR=0;PRO=0;QA=714;QR=4214;RO=124;RPL=0;RPP=42.0968;RPPR=272.273;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=0;SRP=272.273;SRR=124;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:20,3:20:669:3:123:-4.5411,0,-53.6012 0/1:24:21,3:21:732:3:118:-3.77686,0,-58.9786 0/0:17:17,0:17:591:0:0:0,-5.11751,-53.5174 0/1:21:15,6:15:494:6:242:-15.8353,0,-38.4511 0/0:28:27,1:27:913:1:40:0,-4.43316,-78.4835 0/1:29:24,5:24:815:5:191:-8.82514,0,-64.9333 dDocent_Contig_9008 10 . C T 4756.09 . AB=0.432432;ABP=19.1496;AC=6;AF=0.5;AN=12;AO=176;CIGAR=1X;DP=407;DPB=407;DPRA=0;EPP=385.189;EPPR=504.62;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.789773;PAIREDR=0.878788;PAO=0;PQA=0;PQR=0;PRO=0;QA=6751;QR=9192;RO=231;RPL=0;RPP=385.189;RPPR=504.62;RPR=176;RUN=1;SAF=176;SAP=385.189;SAR=0;SRF=231;SRP=504.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:48:26,22:26:1049:22:846:-62.0081,0,-80.249 0/1:94:56,38:56:2214:38:1458:-103.188,0,-171.131 0/1:60:29,31:29:1162:31:1190:-89.3197,0,-86.7976 0/1:77:32,45:32:1263:45:1699:-129.979,0,-90.7589 0/1:54:42,12:42:1663:12:468:-26.2156,0,-133.643 0/1:74:46,28:46:1841:28:1090:-76.1203,0,-143.62 dDocent_Contig_9009 31 . A T 98.2496 . AB=0.171429;ABP=35.8306;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=311;DPB=311;DPRA=0.930909;EPP=33.4109;EPPR=645.766;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=567;QR=11628;RO=296;RPL=0;RPP=33.4109;RPPR=645.766;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=296;SRP=645.766;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:75:73,2:73:2878:2:82:0,-14.7976,-251.356 0/1:35:29,6:29:1166:6:239:-11.3478,0,-94.682 0/0:22:20,1:20:763:1:41:0,-2.56678,-64.9508 0/0:99:95,4:95:3708:4:164:0,-14.6521,-318.598 0/0:25:24,1:24:930:1:41:0,-3.43118,-79.9115 0/0:55:55,0:55:2183:0:0:0,-16.5566,-196.648 dDocent_Contig_9010 39 . G T 3944.5 . AB=0.37931;ABP=54.3769;AC=6;AF=0.5;AN=12;AO=154;CIGAR=1X;DP=406;DPB=406;DPRA=0;EPP=241.308;EPPR=79.1497;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0324675;PAIREDR=0.396825;PAO=0;PQA=0;PQR=0;PRO=0;QA=5845;QR=9251;RO=252;RPL=0;RPP=337.417;RPPR=550.221;RPR=154;RUN=1;SAF=142;SAP=241.308;SAR=12;SRF=173;SRP=79.1497;SRR=79;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:78:45,33:45:1637:33:1221:-86.6953,0,-124.117 0/1:80:53,27:53:1951:27:1048:-70.5408,0,-151.752 0/1:51:21,30:21:789:30:1151:-88.5317,0,-55.9791 0/1:63:30,33:30:1088:33:1245:-93.3732,0,-79.2539 0/1:71:54,17:54:2002:17:634:-36.0105,0,-159.052 0/1:63:49,14:49:1784:14:546:-30.5204,0,-141.86 dDocent_Contig_9011 36 . C T 4825.14 . AB=0.485294;ABP=3.64897;AC=5;AF=0.416667;AN=12;AO=165;CIGAR=1X;DP=366;DPB=366;DPRA=2.61538;EPP=361.303;EPPR=439.476;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6586;QR=8032;RO=201;RPL=0;RPP=361.303;RPPR=439.476;RPR=165;RUN=1;SAF=165;SAP=361.303;SAR=0;SRF=201;SRP=439.476;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:38,4:38:1493:4:161:-2.23164,0,-121.965 0/1:93:60,33:60:2397:33:1319:-90.9679,0,-187.884 0/1:75:45,30:45:1804:30:1193:-85.0698,0,-139.991 0/1:103:21,82:21:836:82:3269:-263.261,0,-44.5486 0/0:26:26,0:26:1052:0:0:0,-7.82678,-94.9695 0/1:27:11,16:11:450:16:644:-50.1649,0,-32.728 dDocent_Contig_9013 18 . C T 2313.02 . AB=0.353846;ABP=39.1904;AC=7;AF=0.583333;AN=12;AO=89;CIGAR=1X;DP=216;DPB=216;DPRA=0;EPP=196.271;EPPR=278.787;GTI=0;LEN=1;MEANALT=1;MQM=59.2809;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.955056;PAIREDR=0.858268;PAO=0;PQA=0;PQR=0;PRO=0;QA=3329;QR=5016;RO=127;RPL=0;RPP=196.271;RPPR=278.787;RPR=89;RUN=1;SAF=89;SAP=196.271;SAR=0;SRF=127;SRP=278.787;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:26,15:26:1009:15:568:-38.9424,0,-78.7505 0/1:46:42,4:42:1683:4:154:-0.386079,0,-137.842 0/1:43:23,20:23:920:20:733:-53.3412,0,-70.1585 0/1:24:20,4:20:793:4:157:-7.28425,0,-64.4641 0/1:41:15,26:15:575:26:971:-75.0905,0,-39.7391 1/1:21:1,20:1:36:20:746:-63.8638,-2.72336,0 dDocent_Contig_9014 68 . T G 449.352 . AB=0.140704;ABP=226.148;AC=2;AF=0.166667;AN=12;AO=28;CIGAR=1X3M1X;DP=199;DPB=199;DPRA=0;EPP=63.8115;EPPR=285.302;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.928571;PAIREDR=0.8;PAO=0;PQA=0;PQR=0;PRO=0;QA=774;QR=3392;RO=130;RPL=28;RPP=63.8115;RPPR=285.302;RPR=0;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=130;SRP=285.302;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:17:12,1,3:12:326:1,3:30,81:-2.75298,-3.96276,-29.3799,0,-23.2955,-24.7928 0|1:33:22,6,5:22:610:6,5:166,146:-6.50126,0,-46.4533,-1.48456,-36.6243,-48.2513 0|0:34:28,2,4:28:710:2,4:59,108:-0.0695045,-3.78278,-58.6325,0,-50.7175,-54.2234 0|0:50:22,10,17:22:574:10,17:272,466:-30.1993,-15.3542,-57.3718,0,-23.5587,-39.9124 0|0:32:25,1,6:25:638:1,6:25,142:-3.43556,-9.01056,-58.6139,0,-47.9458,-48.0882 0|1:33:21,8,3:21:534:8,3:222,77:-11.2497,0,-39.3079,-11.5517,-35.6899,-52.3617 dDocent_Contig_9015 82 . A G 186.838 . AB=0.272727;ABP=17.8158;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=176;DPB=176;DPRA=1.22936;EPP=24.725;EPPR=361.303;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.842424;PAO=0;PQA=0;PQR=0;PRO=0;QA=360;QR=5984;RO=165;RPL=10;RPP=24.725;RPPR=361.303;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=165;SRP=361.303;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:752:0:0:0,-6.32163,-68.0043 0/0:31:31,0:31:1104:0:0:0,-9.33193,-99.6635 0/1:33:24,9:24:873:9:331:-20.2067,0,-68.956 0/0:34:32,1:32:1173:1:29:0,-7.3193,-102.979 0/0:27:27,0:27:986:0:0:0,-8.12781,-89.0562 0/0:30:30,0:30:1096:0:0:0,-9.0309,-98.9506 dDocent_Contig_9016 20 . C G 312.926 . AB=0.097561;ABP=60.6867;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=2M1X;DP=175;DPB=213;DPRA=1.4386;EPP=11.6962;EPPR=333.074;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.75;PAIREDR=0.526316;PAO=0;PQA=0;PQR=0;PRO=0;QA=162;QR=6058;RO=152;RPL=0;RPP=11.6962;RPPR=333.074;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=152;SRP=333.074;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:32:31,1,0:31:1238:1,0:40,0:0,-5.63728,-107.699,-9.33193,-108,-111.295 0|0:40:32,8,0:32:1271:8,0:318,0:-16.9454,0,-102.621,-26.5784,-105.029,-131.211 0|0:17:13,4,0:13:507:4,0:159,0:-9.57393,0,-40.8557,-13.4873,-42.0598,-55.1518 0|0:20:15,5,0:15:600:5,0:168,0:-9.4263,0,-48.3183,-13.9418,-49.8235,-63.4135 0|0:25:25,0,0:25:994:0,0:0,0:0,-7.52575,-89.7589,-7.52575,-89.7589,-89.7589 0|1:41:36,1,4:36:1448:1,4:37,162:-2.54882,-10.3658,-129.39,0,-116.333,-118.155 dDocent_Contig_9017 107 . N A 67.4314 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=71;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:71:-6.74206,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_9018 10 . A G 237.311 . AB=0.325;ABP=24.2907;AC=5;AF=0.416667;AN=12;AO=37;CIGAR=1X3M1X;DP=1103;DPB=1103;DPRA=0.402732;EPP=83.3548;EPPR=2306.94;GTI=0;LEN=1;MEANALT=1.6;MQM=17.5676;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1438;QR=41543;RO=1061;RPL=0;RPP=83.3548;RPPR=2306.94;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=1061;SRP=2306.94;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:34:26,8:26:1004:8:310:-1.60801,0,-80.4272 0|1:23:17,6:17:673:6:238:-3.85633,0,-53.9798 0|1:23:11,12:11:442:12:463:-11.5714,0,-33.2123 1|1:7:0,7:0:0:7:271:-11.4959,-2.10721,0 0|0:366:365,0:365:14233:0:0:0,-109.876,-1279.76 0|0:650:642,4:642:25191:4:156:0,-188.068,-2258.64 dDocent_Contig_9019 83 . A G 1602.92 . AB=0.310044;ABP=74.7827;AC=4;AF=0.4;AN=10;AO=71;CIGAR=1X;DP=339;DPB=339;DPRA=0.520455;EPP=157.185;EPPR=584.965;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2600;QR=10030;RO=268;RPL=71;RPP=157.185;RPPR=584.965;RPR=0;RUN=1;SAF=71;SAP=157.185;SAR=0;SRF=268;SRP=584.965;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:39:15,24:15:548:24:849:-64.9844,0,-37.9181 0/1:86:78,8:78:2835:8:292:-0.742035,0,-229.481 0/1:30:25,5:25:949:5:164:-6.04446,0,-76.6905 0/1:74:40,34:40:1521:34:1295:-94.5591,0,-114.887 ./.:.:.:.:.:.:.:. 0/0:110:110,0:110:4177:0:0:0,-33.1133,-376.008 dDocent_Contig_9020 25 . T A 2527.11 . AB=0.121711;ABP=758.74;AC=2;AF=0.166667;AN=12;AO=74;CIGAR=1X1M1X1M1I2M5D1X1M3X7M;DP=649;DPB=630.652;DPRA=7.41463;EPP=163.699;EPPR=530.678;GTI=0;LEN=1;MEANALT=13;MQM=59.8108;MQMR=60;NS=6;NUMALT=6;ODDS=2.22045e-16;PAIRED=0.986486;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2900;QR=9113;RO=243;RPL=0;RPP=163.699;RPPR=530.678;RPR=74;RUN=1;SAF=74;SAP=163.699;SAR=0;SRF=243;SRP=530.678;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:137:42,28,4,10,0,18,6:42:1568:28,4,10,0,18,6:1099,160,306,0,663,213:-77.6685,0,-119.963,-77.1301,-115.21,-204.313,-65.7968,-103.875,-181,-191.171,-90.3117,-128.391,-205.517,-194.181,-218.698,-36.0976,-74.1768,-151.304,-139.969,-164.485,-159.066,-72.958,-111.037,-188.163,-176.828,-201.344,-147.131,-199.538 0|0:167:56,18,28,7,12,6,2:56:2073:18,28,7,12,6,2:706,1088,208,440,219,74:-72.4976,-31.2921,-195.463,0,-111.527,-161.162,-72.7508,-184.276,-152.985,-240.23,-53.3968,-164.923,-133.631,-206.379,-219.373,-71.4631,-182.989,-151.698,-224.445,-205.093,-239.245,-83.3013,-194.828,-163.536,-236.284,-216.931,-234.997,-252.288 0|1:101:40,19,7,14,0,2,4:40:1524:19,7,14,0,2,4:738,275,429,0,75,136:-48.6078,0,-119.311,-38.0267,-102.409,-160.944,-26.2807,-90.6576,-128.678,-147.083,-60.649,-125.03,-163.052,-151.297,-185.672,-54.505,-118.887,-156.908,-145.154,-179.528,-178.926,-49.6186,-114,-152.021,-140.267,-174.641,-168.497,-173.437 0|0:203:69,9,14,0,2,29,0:69:2591:9,14,0,2,29,0:357,516,0,73,1008,0:-61.1581,-52.5397,-262.092,-39.7458,-222.618,-247.792,-81.9291,-264.801,-252.006,-294.19,-75.9648,-258.837,-246.042,-288.226,-287.623,0,-182.869,-170.075,-212.258,-206.294,-203.528,-81.9291,-264.801,-252.006,-294.19,-288.226,-212.258,-294.19 0|0:15:11,0,0,0,1,0,0:11:416:0,0,0,1,0,0:0,0,0,39,0,0:0,-3.31133,-37.4136,-3.31133,-37.4136,-37.4136,-3.31133,-37.4136,-37.4136,-37.4136,-0.10131,-34.2068,-34.2068,-34.2068,-33.9058,-3.31133,-37.4136,-37.4136,-37.4136,-34.2068,-37.4136,-3.31133,-37.4136,-37.4136,-37.4136,-34.2068,-37.4136,-37.4136 0|0:26:25,0,1,0,0,0,0:25:941:0,1,0,0,0,0:0,27,0,0,0,0:0,-7.52575,-84.7332,-5.127,-82.6085,-82.3075,-7.52575,-84.7332,-82.6085,-84.7332,-7.52575,-84.7332,-82.6085,-84.7332,-84.7332,-7.52575,-84.7332,-82.6085,-84.7332,-84.7332,-84.7332,-7.52575,-84.7332,-82.6085,-84.7332,-84.7332,-84.7332,-84.7332 dDocent_Contig_9022 24 . T A 2250.7 . AB=0.255937;ABP=199.102;AC=6;AF=0.5;AN=12;AO=97;CIGAR=1X;DP=379;DPB=379;DPRA=0;EPP=213.643;EPPR=615.366;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.752577;PAIREDR=0.755319;PAO=0;PQA=0;PQR=0;PRO=0;QA=3871;QR=11229;RO=282;RPL=0;RPP=213.643;RPPR=615.366;RPR=97;RUN=1;SAF=97;SAP=213.643;SAR=0;SRF=282;SRP=615.366;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:22,12:22:857:12:482:-33.495,0,-67.2044 0/1:80:52,28:52:2092:28:1125:-77.4524,0,-164.378 0/1:46:29,17:29:1153:17:669:-46.6894,0,-90.2026 0/1:96:75,21:75:3022:21:840:-47.0162,0,-243.16 0/1:59:50,9:50:1967:9:361:-15.0908,0,-159.463 0/1:64:54,10:54:2138:10:394:-16.548,0,-173.336 dDocent_Contig_9023 1 . N G 74.9872 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=79;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:79:-7.49763,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_9024 24 . T G 550.585 . AB=0.0869565;ABP=139.341;AC=1;AF=0.1;AN=10;AO=8;CIGAR=1X2M1X;DP=418;DPB=418;DPRA=1.20524;EPP=20.3821;EPPR=828.17;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=322;QR=14826;RO=380;RPL=0;RPP=20.3821;RPPR=828.17;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=380;SRP=828.17;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:97:72,0,25:72:2795:0,25:0,947:-56.322,-77.9962,-307.639,0,-230.024,-222.498 0|0:58:58,0,0:58:2251:0,0:0,0:0,-17.4597,-202.788,-17.4597,-202.788,-202.788 0|0:73:73,0,0:73:2890:0,0:0,0:0,-21.9752,-260.229,-21.9752,-260.229,-260.229 0|0:98:93,0,4:93:3646:0,4:0,116:0,-27.9958,-327.907,-18.801,-318.684,-317.48 .:.:.:.:.:.:.:. 0|1:92:84,8,0:84:3244:8,0:322,0:-1.65417,0,-264.374,-26.9407,-266.782,-293.322 dDocent_Contig_9025 38 . T C 819.171 . AB=0.309735;ABP=38.5417;AC=6;AF=0.5;AN=12;AO=35;CIGAR=1X;DP=113;DPB=113;DPRA=0;EPP=79.0118;EPPR=172.385;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1387;QR=3127;RO=78;RPL=0;RPP=79.0118;RPPR=172.385;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=78;SRP=172.385;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:14,9:14:566:9:355:-25.3847,0,-44.3573 0/1:38:27,11:27:1063:11:441:-28.6066,0,-84.5191 0/1:14:10,4:10:403:4:163:-10.844,0,-32.4138 0/1:18:12,6:12:491:6:225:-15.185,0,-39.1224 0/1:7:6,1:6:236:1:41:-1.98736,0,-19.5042 0/1:13:9,4:9:368:4:162:-11.0536,0,-29.572 dDocent_Contig_9026 14 . G T 431.27 . AB=0.163636;ABP=165.16;AC=3;AF=0.25;AN=12;AO=34;CIGAR=1X;DP=327;DPB=327;DPRA=0;EPP=76.8404;EPPR=632.737;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1348;QR=11489;RO=290;RPL=0;RPP=76.8404;RPPR=632.737;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=290;SRP=632.737;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:39:33,6:33:1316:6:241:-10.3265,0,-106.968 0/1:67:55,12:55:2189:12:480:-23.3823,0,-177.021 0/1:59:50,9:50:1941:9:356:-14.6398,0,-157.13 0/0:36:35,1:35:1397:1:33:0,-7.53794,-122.69 0/0:40:37,3:37:1448:3:123:0,-0.576411,-119.111 0/0:86:80,3:80:3198:3:115:0,-14.6576,-277.155 dDocent_Contig_9027 29 . G C 75.6719 . AB=0.222222;ABP=15.074;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=132;DPB=132;DPRA=0.789474;EPP=11.6962;EPPR=280.959;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=157;QR=5045;RO=128;RPL=0;RPP=11.6962;RPPR=280.959;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=128;SRP=280.959;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:2:2,0:2:50:0:0:0,-0.60206,-4.74973 0/0:45:45,0:45:1783:0:0:0,-13.5463,-160.683 0/0:12:12,0:12:459:0:0:0,-3.61236,-41.6453 0/0:38:38,0:38:1531:0:0:0,-11.4391,-138.03 0/1:18:14,4:14:547:4:157:-9.08989,0,-44.1487 0/0:17:17,0:17:675:0:0:0,-5.11751,-61.0767 dDocent_Contig_9028 10 . A T 219.327 . AB=0.210526;ABP=44.4969;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=193;DPB=193;DPRA=0.910891;EPP=33.4109;EPPR=391.704;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.571429;PAIREDR=0.731844;PAO=0;PQA=0;PQR=0;PRO=0;QA=540;QR=7073;RO=179;RPL=0;RPP=33.4109;RPPR=391.704;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=179;SRP=391.704;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:876:0:0:0,-6.62266,-79.1469 0/1:33:28,5:28:1098:5:195:-7.98913,0,-89.1711 0/1:24:17,7:17:682:7:267:-17.1654,0,-54.4851 0/0:35:33,2:33:1297:2:78:0,-3.13327,-109.579 0/0:22:22,0:22:877:0:0:0,-6.62266,-79.2388 0/0:57:57,0:57:2243:0:0:0,-17.1587,-202.047 dDocent_Contig_9030 26 . T G 701.938 . AB=0.175966;ABP=215.507;AC=4;AF=0.333333;AN=12;AO=41;CIGAR=1X;DP=324;DPB=324;DPRA=1.28022;EPP=92.0407;EPPR=617.537;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.992933;PAO=0;PQA=0;PQR=0;PRO=0;QA=1623;QR=11313;RO=283;RPL=0;RPP=92.0407;RPPR=617.537;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=283;SRP=617.537;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:91:83,8:83:3306:8:324:-2.13509,0,-270.196 0/1:58:51,7:51:2036:7:277:-7.83841,0,-165.968 0/1:79:57,22:57:2266:22:861:-54.0061,0,-180.326 0/0:61:61,0:61:2466:0:0:0,-18.3628,-222.073 0/0:30:30,0:30:1198:0:0:0,-9.0309,-108.097 0/1:5:1,4:1:41:4:161:-13.3697,0,-2.58942 dDocent_Contig_9031 11 . C A 825.846 . AB=0.243243;ABP=87.7564;AC=1;AF=0.0833333;AN=12;AO=36;CIGAR=1X;DP=365;DPB=365;DPRA=3.41014;EPP=81.1833;EPPR=715.253;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1428;QR=13197;RO=328;RPL=0;RPP=81.1833;RPPR=715.253;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=328;SRP=715.253;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:905:0:0:0,-6.92369,-81.7525 0/1:148:111,36:111:4483:36:1428:-84.1075,0,-358.72 0/0:24:24,0:24:969:0:0:0,-7.22472,-87.5081 0/0:79:79,0:79:3156:0:0:0,-23.7814,-284.108 0/0:64:64,0:64:2587:0:0:0,-19.2659,-232.95 0/0:27:27,0:27:1097:0:0:0,-8.12781,-99.013 dDocent_Contig_9032 15 . G A 185.264 . AB=0.151163;ABP=93.9091;AC=2;AF=0.166667;AN=12;AO=19;CIGAR=1X;DP=247;DPB=247;DPRA=1.56429;EPP=44.2683;EPPR=498.106;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.368421;PAIREDR=0.539474;PAO=0;PQA=0;PQR=0;PRO=0;QA=758;QR=8990;RO=228;RPL=0;RPP=44.2683;RPPR=498.106;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=228;SRP=498.106;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:26,7:26:1009:7:283:-15.909,0,-81.1662 0/0:41:39,2:39:1548:2:81:0,-4.6565,-131.877 0/0:28:28,0:28:1117:0:0:0,-8.42884,-100.814 0/1:53:47,6:47:1838:6:238:-5.83919,0,-149.669 0/0:35:33,2:33:1286:2:79:0,-3.03842,-108.507 0/0:57:55,2:55:2192:2:77:0,-9.84957,-190.149 dDocent_Contig_9033 84 . G T 368.045 . AB=0.285714;ABP=25.3454;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=427;DPB=427;DPRA=0.301887;EPP=37.7539;EPPR=895.485;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997567;PAO=0;PQA=0;PQR=0;PRO=0;QA=624;QR=16106;RO=411;RPL=16;RPP=37.7539;RPPR=895.485;RPR=0;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=411;SRP=895.485;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:8:2,6:2:76:6:239:-19.4756,0,-4.80643 0/0:14:14,0:14:526:0:0:0,-4.21442,-47.6787 0/1:48:38,10:38:1537:10:385:-20.5505,0,-124.117 0/0:5:5,0:5:178:0:0:0,-1.50515,-16.3654 0/0:175:175,0:175:6790:0:0:0,-52.6802,-610.881 0/0:177:177,0:177:6999:0:0:0,-53.2823,-629.637 dDocent_Contig_9034 23 . A G 145.228 . AB=0.3;ABP=9.95901;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=110;DPB=110;DPRA=1.11111;EPP=16.0391;EPPR=228.843;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=241;QR=4075;RO=104;RPL=0;RPP=16.0391;RPPR=228.843;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=104;SRP=228.843;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:259:0:0:0,-2.10721,-23.6607 0/0:7:7,0:7:276:0:0:0,-2.10721,-25.2088 0/0:42:42,0:42:1625:0:0:0,-12.6433,-146.492 0/0:23:23,0:23:919:0:0:0,-6.92369,-83.0141 0/0:11:11,0:11:437:0:0:0,-3.31133,-39.6834 0/1:20:14,6:14:559:6:241:-16.0457,0,-44.6333 dDocent_Contig_9036 32 . C A 1830.63 . AB=0.248503;ABP=186.506;AC=6;AF=0.5;AN=12;AO=83;CIGAR=1X;DP=334;DPB=334;DPRA=0;EPP=183.243;EPPR=545.878;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.457831;PAIREDR=0.448;PAO=0;PQA=0;PQR=0;PRO=0;QA=3252;QR=10010;RO=250;RPL=0;RPP=183.243;RPPR=545.878;RPR=83;RUN=1;SAF=83;SAP=183.243;SAR=0;SRF=250;SRP=545.878;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:30,6:30:1193:6:242:-11.3199,0,-96.8138 0/1:63:45,18:45:1821:18:680:-42.5504,0,-145.13 0/1:42:29,13:29:1151:13:507:-33.3278,0,-91.2199 0/1:88:71,17:71:2826:17:679:-34.9497,0,-227.967 0/1:44:30,13:30:1210:13:517:-33.7371,0,-96.0426 0/1:61:45,16:45:1809:16:627:-38.3995,0,-144.659 dDocent_Contig_9037 29 . G A 1395.72 . AB=0.217949;ABP=218.599;AC=4;AF=0.333333;AN=12;AO=68;CIGAR=1X;DP=409;DPB=409;DPRA=1.60825;EPP=150.67;EPPR=743.482;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.117647;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2660;QR=13063;RO=341;RPL=0;RPP=150.67;RPPR=743.482;RPR=68;RUN=1;SAF=68;SAP=150.67;SAR=0;SRF=341;SRP=743.482;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:43:34,9:34:1291:9:359:-19.7291,0,-103.532 0/1:71:60,11:60:2306:11:410:-15.8673,0,-186.358 0/1:100:74,26:74:2866:26:1030:-62.8955,0,-227.978 0/1:98:76,22:76:2877:22:861:-48.3018,0,-229.571 0/0:51:51,0:51:1946:0:0:0,-15.3525,-175.36 0/0:46:46,0:46:1777:0:0:0,-13.8474,-160.168 dDocent_Contig_9038 111 . A T 155.051 . AB=0.4375;ABP=3.55317;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=59;DPB=59;DPRA=1.86047;EPP=18.2106;EPPR=115.927;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.961538;PAO=0;PQA=0;PQR=0;PRO=0;QA=239;QR=1788;RO=52;RPL=0;RPP=18.2106;RPPR=115.927;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=115.927;SRR=52;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:5:5,0:5:174:0:0:0,-1.50515,-16.002 0/0:1:1,0:1:35:0:0:0,-0.30103,-3.49863 0/0:8:8,0:8:280:0:0:0,-2.40824,-25.54 0/0:19:19,0:19:644:0:0:0,-5.71957,-58.2791 0/0:10:10,0:10:347:0:0:0,-3.0103,-31.5653 0/1:16:9,7:9:308:7:239:-17.0275,0,-23.236 dDocent_Contig_9039 38 . T C 407.52 . AB=0.230769;ABP=52.119;AC=1;AF=0.0833333;AN=12;AO=70;CIGAR=1X;DP=1621;DPB=1621;DPRA=8.56216;EPP=155.013;EPPR=3368.79;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99871;PAO=0;PQA=0;PQR=0;PRO=0;QA=2815;QR=61574;RO=1550;RPL=0;RPP=155.013;RPPR=3368.79;RPR=70;RUN=1;SAF=70;SAP=155.013;SAR=0;SRF=1550;SRP=3368.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:319:305,14:305:12061:14:560:0,-45.2869,-1033.9 0/0:513:507,6:507:20109:6:243:0,-132.18,-1785.88 0/0:268:256,11:256:10153:11:443:0,-40.5507,-872.903 0/0:406:385,21:385:15372:21:842:0,-46.1318,-1306.19 0/0:37:37,0:37:1496:0:0:0,-11.1381,-134.881 0/1:78:60,18:60:2383:18:727:-42.2749,0,-191.14 dDocent_Contig_9040 113 . A G 61.2159 . AB=0.222222;ABP=9.04217;AC=3;AF=0.25;AN=12;AO=6;CIGAR=1X;DP=319;DPB=319;DPRA=1.3561;EPP=16.0391;EPPR=680.51;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.996795;PAO=0;PQA=0;PQR=0;PRO=0;QA=125;QR=9713;RO=312;RPL=0;RPP=16.0391;RPPR=680.51;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=680.51;SRR=312;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:113:112,1:112:3453:1:7:0,-33.3164,-310.309 0/0:41:41,0:41:1280:0:0:0,-12.3422,-115.482 0/0:96:95,1:95:2949:1:7:0,-28.1989,-264.957 0/0:59:57,1:57:1803:1:7:0,-16.8297,-161.842 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 0/1:9:7,2:7:228:2:69:-3.84339,0,-18.1312 dDocent_Contig_9041 7 . A T 46.9739 . AB=0.147059;ABP=39.7976;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=217;DPB=217;DPRA=0.928962;EPP=13.8677;EPPR=463.362;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.353774;PAO=0;PQA=0;PQR=0;PRO=0;QA=179;QR=8071;RO=212;RPL=0;RPP=13.8677;RPPR=463.362;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=212;SRP=463.362;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:736:0:0:0,-5.71957,-66.5712 0/0:44:44,0:44:1661:0:0:0,-13.2453,-149.755 0/0:27:27,0:27:1036:0:0:0,-8.12781,-93.5498 0/0:40:40,0:40:1535:0:0:0,-12.0412,-138.422 0/1:34:29,5:29:1093:5:179:-6.22026,0,-88.4306 0/0:53:53,0:53:2010:0:0:0,-15.9546,-181.139 dDocent_Contig_9042 19 . G A 591.016 . AB=0.227273;ABP=88.2899;AC=5;AF=0.416667;AN=12;AO=30;CIGAR=1X;DP=155;DPB=155;DPRA=1.14783;EPP=68.1545;EPPR=274.444;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.712;PAO=0;PQA=0;PQR=0;PRO=0;QA=1180;QR=4973;RO=125;RPL=0;RPP=68.1545;RPPR=274.444;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=125;SRP=274.444;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:13:11,2:11:441:2:82:-3.86629,0,-36.1323 0/1:25:18,7:18:720:7:276:-17.681,0,-57.5983 0/1:30:24,6:24:940:6:233:-12.306,0,-75.8693 0/1:33:27,6:27:1087:6:229:-11.0377,0,-88.1826 0/0:23:23,0:23:904:0:0:0,-6.92369,-81.6627 0/1:31:22,9:22:881:9:360:-23.4315,0,-70.2663 dDocent_Contig_9043 1 . N G 132.169 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=7.37776;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=143;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:143:-13.2166,-1.20412,0 dDocent_Contig_9044 18 . C G 136.048 . AB=0.115702;ABP=158.226;AC=1;AF=0.0833333;AN=12;AO=28;CIGAR=1X;DP=1398;DPB=1398;DPRA=0.670854;EPP=63.8115;EPPR=2977.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994891;PAO=0;PQA=0;PQR=0;PRO=0;QA=1114;QR=54662;RO=1370;RPL=0;RPP=63.8115;RPPR=2977.93;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=1370;SRP=2977.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:130:127,3:127:5087:3:99:0,-29.903,-448.46 0/0:276:271,5:271:10788:5:203:0,-64.4312,-951.547 0/1:121:107,14:107:4293:14:569:-15.1276,0,-349.889 0/0:274:268,6:268:10573:6:243:0,-60.234,-928.67 0/0:257:257,0:257:10337:0:0:0,-77.3647,-929.624 0/0:340:340,0:340:13584:0:0:0,-102.35,-1221.53 dDocent_Contig_9045 107 . N A 150.165 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0.4;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=152;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:66:-6.26818,-0.60206,0 1/1:1:0,1:0:0:1:20:-1.99996,-0.30103,0 1/1:2:0,2:0:0:2:66:-6.26831,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_9046 14 . C A 1374.57 . AB=0.271429;ABP=98.3069;AC=4;AF=0.333333;AN=12;AO=65;CIGAR=1X;DP=357;DPB=357;DPRA=0;EPP=144.156;EPPR=637.08;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2592;QR=11751;RO=292;RPL=0;RPP=144.156;RPPR=637.08;RPR=65;RUN=1;SAF=65;SAP=144.156;SAR=0;SRF=292;SRP=637.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:29,12:29:1169:12:481:-31.2982,0,-93.1425 0/0:78:72,6:72:2883:6:242:0,-1.32339,-237.406 0/1:49:45,4:45:1810:4:163:-0.307958,0,-148.354 0/1:63:42,21:42:1702:21:847:-57.5768,0,-134.431 0/0:69:67,2:67:2695:2:74:0,-13.7471,-235.642 0/1:57:37,20:37:1492:20:785:-53.8024,0,-117.365 dDocent_Contig_9047 12 . G A 143.917 . AB=0.181818;ABP=51.3749;AC=3;AF=0.25;AN=12;AO=10;CIGAR=1X;DP=122;DPB=122;DPRA=0.820896;EPP=24.725;EPPR=246.215;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=389;QR=4487;RO=112;RPL=0;RPP=24.725;RPPR=246.215;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=112;SRP=246.215;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:18:16,2:16:632:2:81:-2.26719,0,-51.7932 0/0:27:27,0:27:1064:0:0:0,-8.12781,-96.0495 0/0:10:10,0:10:408:0:0:0,-3.0103,-37.0806 0/0:30:30,0:30:1212:0:0:0,-9.0309,-109.353 0/1:17:14,3:14:564:3:107:-4.85889,0,-45.9853 0/1:20:15,5:15:607:5:201:-12.4499,0,-48.9472 dDocent_Contig_9048 14 . A G 3299.89 . AB=0.547264;ABP=6.91031;AC=6;AF=0.5;AN=12;AO=110;CIGAR=1X;DP=201;DPB=201;DPRA=0;EPP=241.872;EPPR=200.614;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.790909;PAIREDR=0.747253;PAO=0;PQA=0;PQR=0;PRO=0;QA=4442;QR=3652;RO=91;RPL=0;RPP=241.872;RPPR=200.614;RPR=110;RUN=1;SAF=110;SAP=241.872;SAR=0;SRF=91;SRP=200.614;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:20,15:20:806:15:611:-44.7914,0,-62.3205 0/1:29:7,22:7:278:22:891:-71.7673,0,-16.6598 0/1:35:7,28:7:283:28:1125:-90.9945,0,-15.307 0/1:43:21,22:21:842:22:883:-66.8314,0,-63.1473 0/1:24:14,10:14:560:10:405:-29.5853,0,-43.5181 0/1:35:22,13:22:883:13:527:-37.2411,0,-69.2419 dDocent_Contig_9050 54 . C A 80.0038 . AB=0.107955;ABP=237.973;AC=2;AF=0.166667;AN=12;AO=25;CIGAR=1X;DP=558;DPB=558;DPRA=0.791667;EPP=57.2971;EPPR=1160.41;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=935;QR=20504;RO=533;RPL=25;RPP=57.2971;RPPR=1160.41;RPR=0;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=533;SRP=1160.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:103:103,0:103:3931:0:0:0,-31.0061,-353.827 0/1:79:71,8:71:2763:8:279:-1.6569,0,-225.021 0/1:97:86,11:86:3317:11:426:-9.49159,0,-269.434 0/0:84:81,3:81:3040:3:115:0,-14.5625,-262.994 0/0:113:113,0:113:4354:0:0:0,-34.0164,-391.881 0/0:82:79,3:79:3099:3:115:0,-13.9597,-268.29 dDocent_Contig_9051 134 . T C 351.629 . AB=0.173913;ABP=172.952;AC=2;AF=0.166667;AN=12;AO=36;CIGAR=1X;DP=404;DPB=404;DPRA=1.54088;EPP=81.1833;EPPR=802.112;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=46.5;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994565;PAO=0;PQA=0;PQR=0;PRO=0;QA=1226;QR=13165;RO=368;RPL=0;RPP=81.1833;RPPR=802.112;RPR=36;RUN=1;SAF=0;SAP=81.1833;SAR=36;SRF=0;SRP=802.112;SRR=368;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:58:43,15:43:1556:15:508:-26.8232,0,-121.483 0/0:142:142,0:142:5068:0:0:0,-42.7463,-447.279 0/0:61:57,4:57:2050:4:148:0,-5.32553,-169.985 0/1:126:109,17:109:3900:17:570:-11.558,0,-309.823 0/0:2:2,0:2:64:0:0:0,-0.60206,-1.32786 0/0:15:15,0:15:527:0:0:0,-4.51545,-47.3028 dDocent_Contig_9052 7 . A T 91.5683 . AB=0.107784;ABP=226.152;AC=2;AF=0.166667;AN=12;AO=28;CIGAR=1X;DP=433;DPB=433;DPRA=2.34868;EPP=28.1373;EPPR=882.457;GTI=0;LEN=1;MEANALT=1;MQM=56.1071;MQMR=59.3407;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0;PAIREDR=0.261728;PAO=0;PQA=0;PQR=0;PRO=0;QA=1038;QR=15427;RO=405;RPL=0;RPP=63.8115;RPPR=882.457;RPR=28;RUN=1;SAF=23;SAP=28.1373;SAR=5;SRF=405;SRP=882.457;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:82:72,10:72:2751:10:378:-9.68765,0,-223.092 0/0:91:83,8:83:3179:8:281:0,-2.11167,-260.984 0/1:85:77,8:77:2965:8:310:-2.67603,0,-241.427 0/0:99:97,2:97:3661:2:69:0,-23.3407,-319.163 0/0:31:31,0:31:1190:0:0:0,-9.33193,-107.398 0/0:45:45,0:45:1681:0:0:0,-13.5463,-147.693 dDocent_Contig_9053 57 . T A 381.371 . AB=0.171429;ABP=134.291;AC=2;AF=0.166667;AN=12;AO=35;CIGAR=1X;DP=659;DPB=659;DPRA=0.529687;EPP=79.0118;EPPR=1358.01;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998397;PAO=0;PQA=0;PQR=0;PRO=0;QA=1342;QR=24490;RO=624;RPL=35;RPP=79.0118;RPPR=1358.01;RPR=0;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=624;SRP=1358.01;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:70:63,7:63:2386:7:262:-2.8641,0,-193.878 0/1:70:53,17:53:2020:17:658:-38.4851,0,-160.964 0/0:114:109,5:109:4393:5:188:0,-17.0382,-378.022 0/0:85:79,6:79:3096:6:234:0,-4.15893,-257.299 0/0:148:148,0:148:5793:0:0:0,-44.5524,-521.209 0/0:172:172,0:172:6802:0:0:0,-51.7772,-611.888 dDocent_Contig_9054 43 . A G 1943.69 . AB=0.240541;ABP=219.359;AC=6;AF=0.5;AN=12;AO=89;CIGAR=1X;DP=370;DPB=370;DPRA=0;EPP=196.271;EPPR=613.194;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.910112;PAIREDR=0.533808;PAO=0;PQA=0;PQR=0;PRO=0;QA=3499;QR=10900;RO=281;RPL=0;RPP=196.271;RPPR=613.194;RPR=89;RUN=1;SAF=89;SAP=196.271;SAR=0;SRF=281;SRP=613.194;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:45:32,13:32:1226:13:518:-33.4184,0,-97.0695 0/1:53:48,5:48:1831:5:198:-2.24241,0,-149.032 0/1:67:52,15:52:2085:15:589:-33.1774,0,-167.668 0/1:66:43,23:43:1647:23:879:-59.5443,0,-128.587 0/1:75:57,18:57:2250:18:723:-42.8194,0,-180.1 0/1:64:49,15:49:1861:15:592:-34.3492,0,-148.435 dDocent_Contig_9055 12 . A T 4113.29 . AB=0.0601504;ABP=226.509;AC=0;AF=0;AN=12;AO=8;CIGAR=1X2M1X3M8D1M;DP=282;DPB=205.75;DPRA=0;EPP=20.3821;EPPR=222.329;GTI=0;LEN=1;MEANALT=4.5;MQM=51.875;MQMR=60;NS=6;NUMALT=3;ODDS=2.77556e-17;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=317;QR=3936;RO=101;RPL=0;RPP=20.3821;RPPR=222.329;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=101;SRP=222.329;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:37:15,0,14,7:15:592:0,14,7:0,548,275:-40.4692,-44.9846,-93.6976,0,-48.7124,-44.498,-22.3686,-71.082,-26.0975,-68.9748 0|0:44:4,0,29,7:4:156:0,29,7:0,1132,282:-101.94,-103.144,-115.968,-10.4444,-23.2769,-14.5471,-79.8965,-92.7213,0,-90.6141 0|0:36:14,0,17,3:14:550:0,17,3:0,667,117:-50.4518,-54.6662,-99.9035,0,-45.2477,-40.1302,-45.0492,-90.2869,-35.6308,-89.3838 0|0:32:16,0,12,3:16:610:0,12,3:0,460,121:-32.9168,-37.7333,-87.7673,0,-50.0206,-46.4082,-27.7555,-77.7912,-40.0432,-76.8881 0|0:52:25,6,14,3:25:964:6,14,3:237,552,122:-37.7992,-25.9654,-103.317,0,-59.8046,-74.9494,-35.2589,-95.0586,-69.0984,-113.514 0|0:81:27,2,52,0:27:1064:2,52,0:80,2036,0:-158.974,-160.542,-247.479,0,-80.9744,-71.8808,-167.102,-248.081,-87.5344,-254.641 dDocent_Contig_9056 37 . C A 192.999 . AB=0.208333;ABP=38.4777;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=188;DPB=188;DPRA=1.71429;EPP=24.725;EPPR=389.532;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.876404;PAO=0;PQA=0;PQR=0;PRO=0;QA=388;QR=7174;RO=178;RPL=0;RPP=24.725;RPPR=389.532;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=178;SRP=389.532;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:647:0:0:0,-4.81648,-58.5637 0/1:48:38,10:38:1533:10:388:-20.8228,0,-123.757 0/0:30:30,0:30:1214:0:0:0,-9.0309,-109.531 0/0:43:43,0:43:1713:0:0:0,-12.9443,-154.389 0/0:26:26,0:26:1057:0:0:0,-7.82678,-95.4173 0/0:25:25,0:25:1010:0:0:0,-7.52575,-91.1927 dDocent_Contig_9057 29 . T A 1695.77 . AB=0.217158;ABP=262.196;AC=3;AF=0.25;AN=12;AO=89;CIGAR=1X;DP=538;DPB=538;DPRA=9.10714;EPP=196.271;EPPR=975.83;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3501;QR=17674;RO=448;RPL=0;RPP=196.271;RPPR=975.83;RPR=89;RUN=1;SAF=89;SAP=196.271;SAR=0;SRF=448;SRP=975.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:137:129,8:129:5081:8:323:0,-11.8025,-427.733 0/1:98:79,19:79:3140:19:727:-36.2375,0,-253.174 0/1:164:139,24:139:5452:24:955:-37.085,0,-441.365 0/1:111:73,38:73:2910:38:1496:-101.476,0,-228.569 0/0:13:13,0:13:487:0:0:0,-3.91339,-44.1611 0/0:15:15,0:15:604:0:0:0,-4.51545,-54.6976 dDocent_Contig_9058 33 . C T 687.524 . AB=0.145897;ABP=361.33;AC=4;AF=0.333333;AN=12;AO=52;CIGAR=1X;DP=451;DPB=451;DPRA=0;EPP=107.408;EPPR=696.624;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.7995;NS=6;NUMALT=1;ODDS=0;PAIRED=0.442308;PAIREDR=0.451128;PAO=0;PQA=0;PQR=0;PRO=0;QA=2090;QR=15799;RO=399;RPL=0;RPP=115.927;RPPR=869.428;RPR=52;RUN=1;SAF=51;SAP=107.408;SAR=1;SRF=378;SRP=696.624;SRR=21;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:49,1:49:1963:1:41:0,-10.9569,-172.771 0/1:86:76,10:76:2992:10:399:-10.3784,0,-243.49 0/1:33:26,7:26:1023:7:284:-16,0,-82.1507 0/1:116:96,20:96:3823:20:803:-37.6673,0,-308.729 0/0:72:69,3:69:2700:3:120:0,-10.4868,-231.936 0/1:94:83,11:83:3298:11:443:-11.9285,0,-268.584 dDocent_Contig_9059 8 . T C 23262.9 . AB=0.131603;ABP=6452.32;AC=6;AF=0.5;AN=12;AO=720;CIGAR=1X3M;DP=5471;DPB=5471;DPRA=0;EPP=1566.47;EPPR=6489.61;GTI=0;LEN=1;MEANALT=10.5;MQM=54.8222;MQMR=55.311;NS=6;NUMALT=4;ODDS=0;PAIRED=0.993056;PAIREDR=0.667545;PAO=0;PQA=0;PQR=0;PRO=0;QA=27016;QR=117015;RO=3035;RPL=0;RPP=1566.47;RPPR=6593.43;RPR=720;RUN=1;SAF=720;SAP=1566.47;SAR=0;SRF=3023;SRP=6489.61;SRR=12;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:639:370,109,66,10,42:370:14264:109,66,10,42:4211,2367,213,1618:-210.43,0,-1087.31,-130.943,-929.259,-1231.19,-308.079,-1106.39,-1237.32,-1425.18,-199.243,-997.558,-1128.49,-1305.62,-1306.71 0|1:1072:692,205,47,1,67:692:26726:205,47,1,67:7900,1794,38,2631:-421.453,0,-2095.17,-484.145,-2011.26,-2626.87,-626.65,-2153.76,-2637.9,-2783.22,-429.511,-1956.62,-2440.76,-2583.27,-2566.21 0|1:585:404,70,47,4,37:404:15607:70,47,4,37:2713,1631,98,1464:-82.7843,0,-1245.91,-74.6251,-1137.21,-1327.45,-197.597,-1260.18,-1334.8,-1463.37,-88.3463,-1150.94,-1225.56,-1348.53,-1344.19 0|1:998:590,164,100,5,91:590:22670:164,100,5,91:6338,3844,118,3580:-315.677,0,-1791.78,-178.254,-1526.12,-1989.3,-485.25,-1833.11,-2011.37,-2324.89,-207.525,-1555.39,-1733.65,-2040.64,-2021.28 0|1:982:454,213,238,7,46:454:17476:213,238,7,46:8235,8973,260,1783:-587.67,-81.0453,-1396.73,0,-736.513,-1308.16,-703.338,-1439.85,-1358.8,-2081.03,-582.056,-1318.57,-1237.52,-1940.86,-1948.01 0|1:1195:525,299,222,60,61:525:20272:299,222,60,61:11521,8407,2400,2359:-719.498,0,-1524.99,-203.593,-941.057,-1751.76,-680.449,-1417.91,-1621.51,-2277.39,-708.952,-1446.41,-1650.01,-2126.86,-2305.59 dDocent_Contig_9061 9 . C T 9282.75 . AB=0.395133;ABP=85.4432;AC=6;AF=0.5;AN=12;AO=341;CIGAR=1X6M;DP=863;DPB=863;DPRA=0;EPP=743.482;EPPR=932.4;GTI=0;LEN=1;MEANALT=5.33333;MQM=59.8035;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.956012;PAIREDR=0.96028;PAO=0;PQA=0;PQR=0;PRO=0;QA=13025;QR=16736;RO=428;RPL=0;RPP=743.482;RPPR=932.4;RPR=341;RUN=1;SAF=341;SAP=743.482;SAR=0;SRF=428;SRP=932.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:93:55,0,4,33:55:2162:0,4,33:0,158,1271:-87.8032,-104.36,-282.199,-91.3568,-269.197,-267.992,0,-177.839,-164.837,-167.905 0|1:166:73,0,20,66:73:2872:0,20,66:0,782,2513:-184.145,-206.12,-442.374,-141.825,-378.08,-372.06,0,-236.252,-171.959,-216.384 0|1:119:51,2,1,65:51:1989:2,1,65:74,39,2521:-191.788,-201.087,-363.974,-203.935,-361.371,-367.123,0,-157.448,-160.295,-143.934 0|1:136:58,7,3,56:58:2238:7,3,56:273,120,2131:-157.24,-152.26,-333.932,-164.814,-326.154,-347.691,0,-161.335,-173.889,-166.917 0|1:163:86,1,0,67:86:3353:1,0,67:40,0,2547:-183.019,-205.612,-480.917,-208.907,-481.218,-484.513,0,-272.341,-275.636,-255.467 0|1:186:105,6,12,54:105:4122:6,12,54:233,460,2042:-135.502,-147.964,-485.177,-129.361,-449.235,-464.768,0,-319.873,-301.27,-322.762 dDocent_Contig_9062 51 . C T 28452.4 . AB=0.614947;ABP=144.287;AC=11;AF=0.916667;AN=12;AO=757;CIGAR=2X;DP=1231;DPB=1231;DPRA=0;EPP=1552.66;EPPR=272.273;GTI=0;LEN=1;MEANALT=4.16667;MQM=59.5654;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.130779;PAIREDR=0.491935;PAO=0;PQA=0;PQR=0;PRO=0;QA=29854;QR=4882;RO=124;RPL=749;RPP=1578.06;RPPR=272.273;RPR=8;RUN=1;SAF=738;SAP=1485.93;SAR=19;SRF=124;SRP=272.273;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:138:4,9,26,95:4:157:9,26,95:361,1044,3754:-380.697,-352.157,-362.358,-295.876,-279.042,-300.96,-73.1183,-56.2839,0,-57.4308 1|1:197:23,6,43,124:23:898:6,43,124:244,1657,4886:-455.702,-442.499,-514.504,-326.802,-380.485,-387.668,-62.0088,-115.692,0,-98.4928 0|1:139:22,4,22,88:22:864:4,22,88:156,850,3461:-277.954,-271.754,-341.607,-214.776,-273.011,-279.211,0,-58.2379,-1.26073,-44.5701 1|1:224:26,8,47,141:26:997:8,47,141:320,1876,5594:-523.635,-505.102,-584.5,-376.954,-432.399,-444.611,-72.7114,-128.153,0,-112.068 1|1:136:14,11,30,79:14:566:11,30,79:440,1139,3034:-290.999,-258.968,-302.325,-201.842,-212.264,-239.478,-46.6928,-57.1162,0,-69.5811 1|1:397:35,33,94,230:35:1400:33,94,230:1304,3699,9125:-927.465,-830.697,-936.084,-634.242,-642.258,-721.266,-188.439,-196.457,0,-234.525 dDocent_Contig_9064 9 . C T 361.787 . AB=0.153409;ABP=186.648;AC=3;AF=0.25;AN=12;AO=30;CIGAR=1X;DP=313;DPB=313;DPRA=0.861017;EPP=68.1545;EPPR=617.537;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.533333;PAIREDR=0.568905;PAO=0;PQA=0;PQR=0;PRO=0;QA=1128;QR=10879;RO=283;RPL=0;RPP=68.1545;RPPR=617.537;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=283;SRP=617.537;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:44:36,8:36:1386:8:310:-15.0183,0,-111.777 0/1:57:52,5:52:2004:5:194:-0.674135,0,-163.438 0/0:23:22,1:22:847:1:30:0,-3.92412,-73.552 0/1:75:61,14:61:2307:14:518:-24.3789,0,-185.264 0/0:55:53,2:53:2050:2:76:0,-9.34198,-177.516 0/0:59:59,0:59:2285:0:0:0,-17.7608,-205.863 dDocent_Contig_9065 12 . C T 2954.08 . AB=0.222597;ABP=399.372;AC=2;AF=0.166667;AN=12;AO=132;CIGAR=1X;DP=1108;DPB=1108;DPRA=2.30291;EPP=289.645;EPPR=2113.69;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9949;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.942623;PAO=0;PQA=0;PQR=0;PRO=0;QA=5299;QR=38930;RO=976;RPL=0;RPP=289.645;RPPR=2122.37;RPR=132;RUN=1;SAF=132;SAP=289.645;SAR=0;SRF=975;SRP=2113.69;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:107:107,0:107:4219:0:0:0,-32.2102,-379.676 0/0:183:183,0:183:7301:0:0:0,-55.0885,-656.719 0/0:93:93,0:93:3721:0:0:0,-27.9958,-334.902 0/0:132:132,0:132:5281:0:0:0,-39.736,-475.137 0/1:198:176,22:176:7023:22:883:-20.1731,0,-572.121 0/1:395:285,110:285:11385:110:4416:-278.457,0,-904.946 dDocent_Contig_9066 45 . G T 2145.85 . AB=0.355556;ABP=43.7857;AC=4;AF=0.333333;AN=12;AO=81;CIGAR=1X;DP=316;DPB=316;DPRA=2.43333;EPP=25.5561;EPPR=513.306;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.817021;PAO=0;PQA=0;PQR=0;PRO=0;QA=3244;QR=9243;RO=235;RPL=55;RPP=25.5561;RPPR=513.306;RPR=26;RUN=1;SAF=81;SAP=178.9;SAR=0;SRF=235;SRP=513.306;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:27,11:27:1063:11:443:-28.7855,0,-84.5162 0/0:67:66,1:66:2604:1:41:0,-16.0744,-230.401 0/0:24:24,0:24:931:0:0:0,-7.22472,-84.0766 0/1:63:45,18:45:1787:18:729:-46.9689,0,-142.068 0/1:65:39,26:39:1555:26:1041:-74.4134,0,-120.619 0/1:59:34,25:34:1303:25:990:-71.6389,0,-99.7784 dDocent_Contig_9067 19 . C T 4054.18 . AB=0.453782;ABP=9.6342;AC=6;AF=0.5;AN=12;AO=162;CIGAR=1X;DP=357;DPB=357;DPRA=0;EPP=354.789;EPPR=426.447;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.611111;PAIREDR=0.758974;PAO=0;PQA=0;PQR=0;PRO=0;QA=5803;QR=7610;RO=195;RPL=0;RPP=354.789;RPPR=426.447;RPR=162;RUN=1;SAF=162;SAP=354.789;SAR=0;SRF=195;SRP=426.447;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:33,9:33:1298:9:323:-16.77,0,-104.438 0/1:82:60,22:60:2355:22:764:-44.3854,0,-187.426 0/1:33:24,9:24:933:9:311:-18.3878,0,-74.3371 0/1:81:57,24:57:2234:24:882:-55.3157,0,-176.839 0/1:52:8,44:8:287:44:1572:-126.1,0,-10.5073 0/1:67:13,54:13:503:54:1951:-155.681,0,-25.4332 dDocent_Contig_9068 13 . C T 3146.7 . AB=0.328042;ABP=100.095;AC=6;AF=0.5;AN=12;AO=124;CIGAR=1X;DP=378;DPB=378;DPRA=0;EPP=272.273;EPPR=554.564;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.991935;PAIREDR=0.996063;PAO=0;PQA=0;PQR=0;PRO=0;QA=4864;QR=9986;RO=254;RPL=0;RPP=272.273;RPPR=554.564;RPR=124;RUN=1;SAF=124;SAP=272.273;SAR=0;SRF=254;SRP=554.564;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:45:20,25:20:758:25:957:-72.8873,0,-54.9874 0/1:67:31,36:31:1220:36:1415:-107.444,0,-89.9096 0/1:50:38,12:38:1518:12:477:-28.23,0,-121.812 0/1:46:20,26:20:778:26:1021:-78.3458,0,-56.4832 0/1:59:52,7:52:2037:7:280:-7.81079,0,-165.764 0/1:111:93,18:93:3675:18:714:-31.1737,0,-297.372 dDocent_Contig_9070 13 . T C 11618.9 . AB=0.0322581;ABP=1299.03;AC=6;AF=0.5;AN=12;AO=22;CIGAR=5M1X4M;DP=801;DPB=860.5;DPRA=0;EPP=50.7827;EPPR=548.05;GTI=0;LEN=1;MEANALT=6;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=1.11022e-16;PAIRED=0.954545;PAIREDR=0.996016;PAO=0;PQA=0;PQR=0;PRO=0;QA=885;QR=9820;RO=251;RPL=0;RPP=50.7827;RPPR=548.05;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=251;SRP=548.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:119:40,9,60,4,0:40:1557:9,60,4,0:331,2294,157,0:-176.197,-161.177,-286.429,0,-100.909,-109.906,-175.325,-276.227,-115.056,-302.083,-188.238,-289.139,-127.968,-303.287,-316.199 0|1:110:37,20,46,3,3:37:1451:20,46,3,3:746,1693,121,123:-127.265,-77.3295,-190.641,0,-58.2641,-105.483,-128.427,-186.687,-109.356,-246.856,-128.249,-186.509,-109.177,-237.606,-246.678 0|1:99:27,4,49,8,5:27:1054:4,49,8,5:146,1861,324,199:-144.471,-140.672,-226.112,0,-74.7158,-71.8913,-125.88,-200.598,-59.9226,-210.117,-136.213,-210.93,-70.2556,-196.139,-221.352 0|1:107:28,10,47,16,2:28:1101:10,47,16,2:384,1788,629,82:-138.206,-115.113,-202.672,0,-59.0476,-76.4196,-94.9015,-153.95,-38.836,-180.655,-139.866,-198.913,-83.7992,-178.703,-229.833 0|1:204:64,13,109,2,9:64:2506:13,109,2,9:503,4107,76,366:-317.261,-295.208,-497.35,0,-164.733,-173.238,-330.295,-495.031,-199.818,-535.748,-306.336,-471.073,-175.86,-506.16,-509.683 0|1:162:55,0,94,0,3:55:2151:0,94,0,3:0,3498,0,115:-269.717,-286.273,-463.125,0,-176.854,-148.557,-286.273,-463.125,-176.854,-463.125,-276.837,-453.689,-167.417,-453.689,-452.786 dDocent_Contig_9071 12 . A G 2421.66 . AB=0.253041;ABP=220.733;AC=2;AF=0.166667;AN=12;AO=131;CIGAR=1X;DP=1537;DPB=1537;DPRA=1.15983;EPP=287.473;EPPR=3056.1;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5138;QR=55629;RO=1406;RPL=0;RPP=287.473;RPPR=3056.1;RPR=131;RUN=1;SAF=131;SAP=287.473;SAR=0;SRF=1406;SRP=3056.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:168:96,72:96:3804:72:2839:-205.05,0,-291.802 0/0:331:315,16:315:12386:16:621:0,-43.4194,-1057.69 0/1:243:211,32:211:8391:32:1258:-40.338,0,-681.566 0/0:332:321,11:321:12713:11:420:0,-61.7997,-1105.17 0/0:146:146,0:146:5778:0:0:0,-43.9504,-519.846 0/0:317:317,0:317:12557:0:0:0,-95.4265,-1129.28 dDocent_Contig_9072 52 . A C 128.117 . AB=0.134146;ABP=98.3432;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=309;DPB=309;DPRA=0.634921;EPP=29.068;EPPR=647.938;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.96633;PAO=0;PQA=0;PQR=0;PRO=0;QA=485;QR=11735;RO=297;RPL=12;RPP=29.068;RPPR=647.938;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=297;SRP=647.938;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:30,4:30:1182:4:160:-4.54878,0,-96.4175 0/0:53:53,0:53:2117:0:0:0,-15.9546,-190.715 0/0:60:60,0:60:2374:0:0:0,-18.0618,-213.825 0/0:76:76,0:76:2973:0:0:0,-22.8783,-267.687 0/1:48:41,7:41:1626:7:284:-11.4846,0,-132.127 0/0:38:37,1:37:1463:1:41:0,-7.34457,-127.825 dDocent_Contig_9073 26 . C T 2067.41 . AB=0.0387409;ABP=766.238;AC=0;AF=0;AN=12;AO=24;CIGAR=1X1M1X;DP=882;DPB=882;DPRA=1.51961;EPP=55.1256;EPPR=1581.67;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.966988;PAO=0;PQA=0;PQR=0;PRO=0;QA=948;QR=28658;RO=727;RPL=0;RPP=55.1256;RPPR=1581.67;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=727;SRP=1581.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:102:98,0,0,4:98:3847:0,0,4:0,0,151:0,-29.5009,-345.891,-29.5009,-345.891,-345.891,-16.7492,-333.517,-333.517,-332.313 0|0:137:117,6,0,14:117:4607:6,0,14:232,0,547:-9.74666,-25.9155,-403.094,-44.9672,-404.9,-423.953,0,-359.936,-378.989,-374.774 0|0:133:105,7,0,20:105:4149:7,0,20:281,0,799:-34.1965,-42.6497,-381.944,-65.8047,-384.052,-407.206,0,-318.244,-341.399,-335.378 0|0:207:190,8,0,8:190:7493:8,0,8:314,0,309:0,-31.3727,-645.426,-57.1957,-647.834,-673.656,-31.8254,-622.461,-648.282,-645.874 0|0:160:108,0,44,7:108:4261:0,44,7:0,1758,275:-112.284,-144.795,-495.364,0,-350.571,-337.326,-122.178,-472.746,-327.953,-470.639 0|0:143:109,3,28,2:109:4301:3,28,2:121,1101,77:-57.7361,-80.5733,-433.53,0,-343.881,-345.426,-84.2275,-428.112,-347.534,-437.484 dDocent_Contig_9074 12 . T C 2539.13 . AB=0.505882;ABP=3.06139;AC=5;AF=0.416667;AN=12;AO=87;CIGAR=1X;DP=195;DPB=195;DPRA=0;EPP=191.928;EPPR=237.529;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.758621;PAIREDR=0.62037;PAO=0;PQA=0;PQR=0;PRO=0;QA=3515;QR=4311;RO=108;RPL=0;RPP=191.928;RPPR=237.529;RPR=87;RUN=1;SAF=87;SAP=191.928;SAR=0;SRF=108;SRP=237.529;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:21,3:21:838:3:122:-4.14777,0,-68.5049 0/0:25:24,1:24:936:1:41:0,-3.43118,-80.446 0/1:26:12,14:12:479:14:574:-44.1742,0,-35.6325 0/1:37:29,8:29:1172:8:327:-18.662,0,-94.6181 0/1:36:11,25:11:445:25:999:-79.3718,0,-29.5681 0/1:47:11,36:11:441:36:1452:-116.778,0,-25.8964 dDocent_Contig_9076 57 . G A 791.177 . AB=0.162338;ABP=308.032;AC=4;AF=0.333333;AN=12;AO=53;CIGAR=1X;DP=413;DPB=413;DPRA=1.05152;EPP=118.098;EPPR=784.74;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.905556;PAO=0;PQA=0;PQR=0;PRO=0;QA=2094;QR=14055;RO=360;RPL=53;RPP=118.098;RPPR=784.74;RPR=0;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=360;SRP=784.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:66:66,0:66:2566:0:0:0,-19.868,-231.093 0/1:75:65,10:65:2564:10:400:-13.7817,0,-208.313 0/1:47:42,5:42:1652:5:203:-4.50465,0,-134.762 0/0:39:36,3:36:1414:3:120:0,-0.552268,-116.322 0/1:82:63,19:63:2421:19:736:-41.8749,0,-193.372 0/1:104:88,16:88:3438:16:635:-26.1779,0,-278.184 dDocent_Contig_9078 52 . T C 423.912 . AB=0.137931;ABP=102.074;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1M1D1X14M;DP=141;DPB=139.471;DPRA=0.805556;EPP=29.068;EPPR=226.672;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.708738;PAO=0;PQA=0;PQR=0;PRO=0;QA=483;QR=4053;RO=103;RPL=12;RPP=29.068;RPPR=226.672;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=103;SRP=226.672;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:12:5,1,6,0:5:200:1,6,0:39,232,0:-17.5443,-15.843,-32.0235,0,-13.2794,-14.6775,-19.0494,-32.3245,-16.4837,-35.5302 0|0:16:11,2,3,0:11:434:2,3,0:81,119,0:-6.47939,-3.10825,-38.2144,0,-29.0203,-34.798,-9.79072,-38.8164,-35.7011,-45.4968 0|0:27:10,6,3,8:10:398:6,3,8:242,122,314:-22.808,-5.86758,-36.8346,-15.7534,-28.5759,-47.6231,0,-12.8197,-22.7048,-30.3608 0|1:32:24,3,2,3:24:950:3,2,3:121,80,113:-2.75598,0,-77.2929,-3.38805,-71.6054,-80.9785,-0.731224,-68.9391,-72.3237,-78.011 0|0:25:25,0,0,0:25:990:0,0,0:0,0,0:0,-7.52575,-89.4041,-7.52575,-89.4041,-89.4041,-7.52575,-89.4041,-89.4041,-89.4041 0|0:29:28,0,0,1:28:1081:0,0,1:0,0,40:0,-8.42884,-97.19,-8.42884,-97.19,-97.19,-4.73419,-93.8944,-93.8944,-93.5934 dDocent_Contig_9079 30 . C A 55.3791 . AB=0.153846;ABP=30.0702;AC=1;AF=0.1;AN=10;AO=4;CIGAR=1X;DP=148;DPB=148;DPRA=0.852459;EPP=11.6962;EPPR=315.702;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=162;QR=5730;RO=144;RPL=0;RPP=11.6962;RPPR=315.702;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=144;SRP=315.702;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:890:0:0:0,-6.92369,-80.395 0/0:28:28,0:28:1130:0:0:0,-8.42884,-101.983 0/1:26:22,4:22:892:4:162:-7.13997,0,-72.7606 0/0:64:64,0:64:2541:0:0:0,-19.2659,-228.833 ./.:.:.:.:.:.:.:. 0/0:7:7,0:7:277:0:0:0,-2.10721,-25.2978 dDocent_Contig_9080 17 . C G 192.99 . AB=0.155844;ABP=82.2267;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=437;DPB=437;DPRA=1.27341;EPP=37.7539;EPPR=917.2;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8125;PAIREDR=0.617577;PAO=0;PQA=0;PQR=0;PRO=0;QA=637;QR=16812;RO=421;RPL=0;RPP=37.7539;RPPR=917.2;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=421;SRP=917.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:40,0:40:1571:0:0:0,-12.0412,-141.63 0/0:79:79,0:79:3165:0:0:0,-23.7814,-284.919 0/0:67:67,0:67:2671:0:0:0,-20.169,-240.507 0/0:81:81,0:81:3235:0:0:0,-24.3834,-291.211 0/1:77:65,12:65:2600:12:485:-20.8219,0,-210.954 0/0:93:89,4:89:3570:4:152:0,-13.9512,-307.277 dDocent_Contig_9081 114 . A G 50.7685 . AB=0.3;ABP=6.48466;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=187;DPB=187;DPRA=0.77037;EPP=13.8677;EPPR=396.047;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=170;QR=5580;RO=181;RPL=0;RPP=13.8677;RPPR=396.047;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=396.047;SRR=181;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:533:0:0:0,-5.41854,-48.255 0/0:25:24,0:24:722:0:0:0,-7.22472,-65.196 0/0:46:46,0:46:1431:0:0:0,-13.8474,-129.071 0/0:42:40,2:40:1263:2:67:0,-6.28012,-107.594 0/1:10:7,3:7:224:3:103:-6.59972,0,-17.4645 0/0:46:46,0:46:1407:0:0:0,-13.8474,-126.906 dDocent_Contig_9082 27 . T G 206.928 . AB=0.203704;ABP=44.1879;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=224;DPB=224;DPRA=0.818182;EPP=35.5824;EPPR=456.848;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=594;QR=8267;RO=209;RPL=0;RPP=35.5824;RPPR=456.848;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=209;SRP=456.848;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:20,6:20:802:6:242:-14.3297,0,-64.6696 0/1:28:23,5:23:917:5:196:-9.58498,0,-74.4074 0/0:47:46,1:46:1844:1:41:0,-10.0538,-162.07 0/0:24:23,1:23:882:1:36:0,-3.62644,-76.0821 0/0:44:44,0:44:1749:0:0:0,-13.2453,-157.629 0/0:55:53,2:53:2073:2:79:0,-9.05902,-179.249 dDocent_Contig_9083 78 . A G 85.4695 . AB=0.132075;ABP=65.3275;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=204;DPB=204;DPRA=1.75497;EPP=18.2106;EPPR=430.79;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=285;QR=7764;RO=197;RPL=7;RPP=18.2106;RPPR=430.79;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=197;SRP=430.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:1170:0:0:0,-8.72987,-105.579 0/0:25:25,0:25:956:0:0:0,-7.52575,-86.339 0/0:6:6,0:6:244:0:0:0,-1.80618,-22.3388 0/0:66:66,0:66:2578:0:0:0,-19.868,-232.169 0/1:53:46,7:46:1816:7:285:-10.0698,0,-147.698 0/0:25:25,0:25:1000:0:0:0,-7.52575,-90.2957 dDocent_Contig_9084 10 . A G 4461.73 . AB=0.366812;ABP=73.5784;AC=6;AF=0.5;AN=12;AO=168;CIGAR=1X;DP=458;DPB=458;DPRA=0;EPP=367.818;EPPR=624.081;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.988095;PAIREDR=0.996552;PAO=0;PQA=0;PQR=0;PRO=0;QA=6595;QR=11394;RO=290;RPL=0;RPP=367.818;RPPR=632.737;RPR=168;RUN=1;SAF=168;SAP=367.818;SAR=0;SRF=289;SRP=624.081;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:55:45,10:45:1772:10:375:-17.5387,0,-143.139 0/1:83:50,33:50:1972:33:1322:-94.257,0,-152.68 0/1:62:54,8:54:2088:8:323:-10.7747,0,-169.448 0/1:137:94,43:94:3734:43:1695:-111.54,0,-294.843 0/1:59:26,33:26:1039:33:1307:-100.139,0,-76.043 0/1:62:21,41:21:789:41:1573:-123.146,0,-52.6591 dDocent_Contig_9085 67 . A T 395.964 . AB=0.267606;ABP=36.3164;AC=4;AF=0.333333;AN=12;AO=22;CIGAR=1X;DP=141;DPB=141;DPRA=1.28421;EPP=50.7827;EPPR=261.416;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.941176;PAO=0;PQA=0;PQR=0;PRO=0;QA=844;QR=4558;RO=119;RPL=22;RPP=50.7827;RPPR=261.416;RPR=0;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=119;SRP=261.416;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:17:11,6:11:403:6:223:-15.3105,0,-31.4931 0/0:19:19,0:19:692:0:0:0,-5.71957,-62.6009 0/1:10:4,6:4:158:6:216:-16.7722,0,-11.59 0/1:13:12,1:12:471:1:41:-0.181177,0,-38.8252 0/0:51:48,3:48:1843:3:123:0,-3.88774,-154.624 0/1:31:25,6:25:991:6:241:-12.7344,0,-80.1596 dDocent_Contig_9086 37 . C T 1064.94 . AB=0.325397;ABP=36.3751;AC=1;AF=0.0833333;AN=12;AO=56;CIGAR=1X;DP=440;DPB=440;DPRA=1.39655;EPP=124.613;EPPR=836.856;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9922;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.303571;PAIREDR=0.807292;PAO=0;PQA=0;PQR=0;PRO=0;QA=2217;QR=15344;RO=384;RPL=0;RPP=124.613;RPPR=836.856;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=384;SRP=836.856;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:56:52,4:52:2079:4:158:0,-2.25778,-172.691 0/0:67:67,0:67:2699:0:0:0,-20.169,-243.024 0/0:62:57,5:57:2295:5:203:0,-0.0108043,-188.049 0/0:80:74,6:74:2942:6:237:0,-2.38207,-243.174 0/0:49:49,0:49:1945:0:0:0,-14.7505,-175.252 0/1:126:85,41:85:3384:41:1619:-108.016,0,-266.669 dDocent_Contig_9087 7 . A G 296.035 . AB=0.325581;ABP=14.3727;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=185;DPB=185;DPRA=0.936508;EPP=35.5824;EPPR=367.818;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.933333;PAIREDR=0.761905;PAO=0;PQA=0;PQR=0;PRO=0;QA=491;QR=6370;RO=168;RPL=0;RPP=35.5824;RPPR=367.818;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=168;SRP=367.818;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:539:0:0:0,-4.21442,-48.855 0/0:60:60,0:60:2262:0:0:0,-18.0618,-203.797 0/0:16:15,1:15:562:1:10:0,-3.81648,-49.9151 0/1:43:27,14:27:1033:14:481:-31.126,0,-80.8068 0/0:1:1,0:1:39:0:0:0,-0.30103,-3.89656 0/0:51:51,0:51:1935:0:0:0,-15.3525,-174.394 dDocent_Contig_9088 11 . G A 454.587 . AB=0.127869;ABP=369.875;AC=2;AF=0.166667;AN=12;AO=58;CIGAR=1X;DP=915;DPB=915;DPRA=1.27581;EPP=128.956;EPPR=1861.79;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.98014;PAO=0;PQA=0;PQR=0;PRO=0;QA=2316;QR=34051;RO=856;RPL=0;RPP=128.956;RPPR=1861.79;RPR=58;RUN=1;SAF=58;SAP=128.956;SAR=0;SRF=856;SRP=1861.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:94:82,12:82:3250:12:484:-15.6137,0,-264.271 0/0:152:144,8:144:5710:8:316:0,-16.9532,-484.925 0/0:124:124,0:124:4958:0:0:0,-37.3277,-446.098 0/0:182:172,10:172:6841:10:404:0,-18.0672,-578.659 0/0:152:151,1:151:6005:1:41:0,-41.662,-536.137 0/1:211:183,27:183:7287:27:1071:-33.0668,0,-591.867 dDocent_Contig_9089 23 . C A 2554 . AB=0.384298;ABP=31.1497;AC=4;AF=0.333333;AN=12;AO=97;CIGAR=1X;DP=393;DPB=393;DPRA=0.834211;EPP=213.643;EPPR=645.766;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0721649;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3878;QR=11698;RO=296;RPL=0;RPP=213.643;RPPR=645.766;RPR=97;RUN=1;SAF=97;SAP=213.643;SAR=0;SRF=296;SRP=645.766;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:86:43,43:43:1679:43:1709:-128.144,0,-125.432 0/0:75:71,4:71:2828:4:164:0,-7.42735,-239.482 0/0:76:76,0:76:2984:0:0:0,-22.8783,-268.658 0/1:101:85,16:85:3388:16:634:-26.9869,0,-274.571 0/1:12:2,10:2:78:10:405:-33.1975,0,-3.79094 0/1:43:19,24:19:741:24:966:-74.2931,0,-54.0575 dDocent_Contig_9090 34 . G A 39.1243 . AB=0.116279;ABP=58.0041;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=258;DPB=258;DPRA=1.14634;EPP=18.2106;EPPR=548.05;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.714286;PAIREDR=0.649402;PAO=0;PQA=0;PQR=0;PRO=0;QA=281;QR=9946;RO=251;RPL=0;RPP=18.2106;RPPR=548.05;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=251;SRP=548.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:992:0:0:0,-7.52575,-89.5797 0/1:43:38,5:38:1461:5:200:-5.43525,0,-118.786 0/0:30:30,0:30:1210:0:0:0,-9.0309,-109.174 0/0:51:49,2:49:1903:2:81:0,-7.6668,-163.791 0/0:46:46,0:46:1850:0:0:0,-13.8474,-166.704 0/0:63:63,0:63:2530:0:0:0,-18.9649,-227.834 dDocent_Contig_9091 8 . T A 387.998 . AB=0.153846;ABP=192.43;AC=2;AF=0.166667;AN=12;AO=37;CIGAR=1X;DP=450;DPB=450;DPRA=3.13333;EPP=83.3548;EPPR=899.828;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=55.7845;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.893462;PAO=0;PQA=0;PQR=0;PRO=0;QA=1412;QR=15809;RO=413;RPL=0;RPP=83.3548;RPPR=899.828;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=413;SRP=899.828;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:94:89,5:89:3411:5:192:0,-10.6468,-270.633 0/0:82:79,3:79:3013:3:113:0,-14.1455,-242.456 0/0:65:64,1:64:2451:1:39:0,-15.6704,-209.026 0/1:125:109,16:109:4184:16:608:-17.4299,0,-326.653 0/0:27:27,0:27:1029:0:0:0,-8.12781,-87.9381 0/1:57:45,12:45:1721:12:460:-24.5918,0,-127.012 dDocent_Contig_9092 17 . T G 1297.47 . AB=0.5625;ABP=5.72464;AC=3;AF=0.25;AN=12;AO=45;CIGAR=1X;DP=124;DPB=124;DPRA=1.81818;EPP=100.727;EPPR=174.557;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.987342;PAO=0;PQA=0;PQR=0;PRO=0;QA=1756;QR=3134;RO=79;RPL=0;RPP=100.727;RPPR=174.557;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=79;SRP=174.557;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:17,5:17:670:5:194:-11.2079,0,-54.0086 0/1:30:8,22:8:320:22:852:-67.9604,0,-20.1368 0/1:28:10,18:10:390:18:710:-55.8004,0,-27.0222 0/0:10:10,0:10:392:0:0:0,-3.0103,-35.6356 0/0:6:6,0:6:243:0:0:0,-1.80618,-22.248 0/0:28:28,0:28:1119:0:0:0,-8.42884,-100.996 dDocent_Contig_9094 13 . C G 113.592 . AB=0.142857;ABP=65.0524;AC=1;AF=0.0833333;AN=12;AO=26;CIGAR=1X;DP=604;DPB=604;DPRA=0.85426;EPP=59.4686;EPPR=1255.95;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=59.9099;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996534;PAO=0;PQA=0;PQR=0;PRO=0;QA=1028;QR=23135;RO=577;RPL=0;RPP=59.4686;RPPR=1255.95;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=577;SRP=1255.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:56:48,8:48:1919:8:323:-12.5811,0,-156.054 0/0:92:86,6:86:3471:6:236:0,-6.08211,-290.799 0/0:122:116,6:116:4645:6:230:0,-15.6622,-396.903 0/0:111:104,6:104:4152:6:239:0,-11.6119,-351.771 0/0:108:108,0:108:4330:0:0:0,-32.5112,-389.649 0/0:115:115,0:115:4618:0:0:0,-34.6184,-414.197 dDocent_Contig_9095 32 . A G 2478.37 . AB=0.0757576;ABP=106.188;AC=0;AF=0;AN=12;AO=5;CIGAR=1X14M;DP=271;DPB=270;DPRA=0;EPP=13.8677;EPPR=241.872;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=7;ODDS=0;PAIRED=1;PAIREDR=0.818182;PAO=0;PQA=0;PQR=0;PRO=0;QA=195;QR=4268;RO=110;RPL=0;RPP=13.8677;RPPR=241.872;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=110;SRP=241.872;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:45:17,0,0,0,19,5,0,4:17:647:0,0,0,19,5,0,4:0,0,0,732,181,0,154:-54.9944,-60.1119,-113.172,-60.1119,-113.172,-113.172,-60.1119,-113.172,-113.172,-113.172,0,-53.0654,-53.0654,-53.0654,-47.3459,-45.342,-98.4,-98.4,-98.4,-38.2951,-96.8948,-60.1119,-113.172,-113.172,-113.172,-53.0654,-98.4,-113.172,-47.4688,-100.529,-100.529,-100.529,-40.4217,-85.7574,-100.529,-99.3248 0|0:60:18,0,0,4,23,10,2,0:18:696:0,0,4,23,10,2,0:0,0,123,892,400,49,0:-67.8758,-73.2943,-130.461,-73.2943,-130.461,-130.461,-63.4405,-120.605,-120.605,-119.401,0,-57.1756,-57.1756,-47.3227,-50.2519,-40.3384,-97.5086,-97.5086,-87.6535,-24.2176,-94.4983,-69.4933,-126.658,-126.658,-116.803,-53.3755,-93.7065,-126.056,-73.2943,-130.461,-130.461,-120.605,-57.1756,-97.5086,-126.658,-130.461 0|0:33:18,0,0,0,10,4,1,0:18:703:0,0,0,10,4,1,0:0,0,0,371,160,40,0:-24.9105,-30.3291,-88.1267,-30.3291,-88.1267,-88.1267,-30.3291,-88.1267,-88.1267,-88.1267,0,-57.7849,-57.7849,-57.7849,-54.7746,-17.1423,-74.945,-74.945,-74.945,-44.6036,-73.7409,-27.0326,-84.8312,-84.8312,-84.8312,-54.4895,-71.6494,-84.5301,-30.3291,-88.1267,-88.1267,-88.1267,-57.7849,-74.945,-84.8312,-88.1267 0|0:49:21,0,0,1,20,1,3,0:21:815:0,0,1,20,1,3,0:0,0,36,788,41,119,0:-58.5126,-64.8342,-131.793,-64.8342,-131.793,-131.793,-61.8979,-128.857,-128.857,-128.556,0,-66.9636,-66.9636,-64.0271,-60.943,-61.4494,-128.409,-128.409,-125.472,-63.5787,-128.108,-55.0378,-121.997,-121.997,-119.061,-57.1668,-118.613,-121.094,-64.8342,-131.793,-131.793,-128.857,-66.9636,-128.409,-121.997,-131.793 0|0:21:6,6,2,0,6,0,0,1:6:229:6,2,0,6,0,0,1:196,80,0,227,0,0,41:-16.8086,-2.81641,-19.7948,-12.0191,-15.0087,-30.2114,-18.6148,-21.601,-30.8135,-37.4068,0,-3.00079,-12.2028,-18.7983,-16.9921,-18.6148,-21.601,-30.8135,-37.4068,-18.7983,-37.4068,-18.6148,-21.601,-30.8135,-37.4068,-18.7983,-37.4068,-37.4068,-15.2274,-18.2151,-27.4269,-34.0206,-15.4109,-34.0206,-34.0206,-33.7196 0|0:63:30,15,0,1,14,0,0,0:30:1178:15,0,1,14,0,0,0:523,0,39,547,0,0,0:-35.9568,-2.47517,-94.8552,-44.9877,-99.3707,-141.887,-41.7811,-96.1647,-138.681,-138.38,0,-54.4009,-96.9151,-93.7089,-92.7007,-44.9877,-99.3707,-141.887,-138.681,-96.9151,-141.887,-44.9877,-99.3707,-141.887,-138.681,-96.9151,-141.887,-141.887,-44.9877,-99.3707,-141.887,-138.681,-96.9151,-141.887,-141.887,-141.887 dDocent_Contig_9097 21 . T C 1729.46 . AB=0.297414;ABP=85.7134;AC=5;AF=0.416667;AN=12;AO=69;CIGAR=1X;DP=254;DPB=254;DPRA=2.10909;EPP=152.842;EPPR=404.733;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9838;NS=6;NUMALT=1;ODDS=0;PAIRED=0.594203;PAIREDR=0.475676;PAO=0;PQA=0;PQR=0;PRO=0;QA=2781;QR=7361;RO=185;RPL=0;RPP=152.842;RPPR=404.733;RPR=69;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=185;SRP=404.733;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:28,5:28:1117:5:200:-8.44572,0,-90.8813 0/1:32:27,5:27:1048:5:201:-8.83772,0,-84.9718 0/0:22:22,0:22:891:0:0:0,-6.62266,-80.4968 0/1:67:56,11:56:2246:11:449:-20.5969,0,-182.129 0/1:43:24,19:24:962:19:771:-56.7655,0,-73.9366 0/1:57:28,29:28:1097:29:1160:-87.5218,0,-81.8523 dDocent_Contig_9099 7 . A C 998.983 . AB=0.493506;ABP=3.0385;AC=2;AF=0.166667;AN=12;AO=134;CIGAR=1X;DP=1512;DPB=1512;DPRA=0;EPP=31.596;EPPR=2932.64;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.7612;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.179104;PAIREDR=0.976761;PAO=0;PQA=0;PQR=0;PRO=0;QA=4919;QR=52394;RO=1377;RPL=0;RPP=293.988;RPPR=2993.13;RPR=134;RUN=1;SAF=88;SAP=31.596;SAR=46;SRF=1370;SRP=2932.64;SRR=7;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:288:271,17:271:10365:17:632:0,-29.4866,-875.284 0/0:403:368,34:368:13991:34:1224:0,-10.8437,-1148.17 0/0:344:326,18:326:12415:18:675:0,-42.4732,-1055.77 0/0:400:373,27:373:14158:27:992:0,-30.8229,-1184.02 0/1:22:12,10:12:441:10:376:-27.569,0,-33.4085 0/1:55:27,28:27:1024:28:1020:-75.5511,0,-75.9132 dDocent_Contig_9100 10 . A C 20150.9 . AB=0.0514706;ABP=1428.9;AC=0;AF=0;AN=12;AO=42;CIGAR=1X3M2X;DP=1038;DPB=1038;DPRA=0;EPP=94.2121;EPPR=502.449;GTI=0;LEN=1;MEANALT=5.6;MQM=59;MQMR=59.9043;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0.495652;PAO=0;PQA=0;PQR=0;PRO=0;QA=1643;QR=8972;RO=230;RPL=0;RPP=94.2121;RPPR=502.449;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=230;SRP=502.449;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:114:30,2,9,66:30:1158:2,9,66:78,343,2634:-207.366,-209.986,-304.478,-188.274,-276.956,-280.658,0,-88.6881,-66.9756,-75.232 0|0:140:22,3,23,81:22:862:3,23,81:120,908,3222:-260.309,-257.059,-327.039,-192.243,-253.253,-256.203,-3.8064,-64.8156,0,-50.3054 0|0:222:55,0,15,139:55:2151:0,15,139:0,578,5543:-437.594,-454.151,-630.999,-406.697,-583.544,-579.029,0,-176.851,-129.397,-135.008 0|0:148:36,3,11,94:36:1416:3,11,94:117,432,3652:-289.148,-290.459,-406.037,-264.499,-371.454,-377.668,0,-106.959,-80.9986,-88.1877 0|0:211:39,22,17,132:39:1531:22,17,132:857,677,5262:-421.513,-362.82,-482.112,-377.647,-433.128,-498.444,0,-55.4838,-70.3096,-86.1817 0|0:203:48,12,11,129:48:1854:12,11,129:471,430,5160:-410.38,-386.124,-534.401,-389.542,-502.726,-538.121,0,-113.182,-116.601,-113.056 dDocent_Contig_9101 33 . G T 42.1385 . AB=0.148148;ABP=32.0437;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=171;DPB=171;DPRA=0.921348;EPP=18.2106;EPPR=359.132;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.3963;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.731707;PAO=0;PQA=0;PQR=0;PRO=0;QA=266;QR=6388;RO=164;RPL=0;RPP=18.2106;RPPR=359.132;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=164;SRP=359.132;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:18,1:18:723:1:39:0,-1.82301,-61.3044 0/1:27:23,4:23:904:4:150:-5.73669,0,-73.0493 0/0:10:10,0:10:396:0:0:0,-3.0103,-35.9974 0/0:36:34,2:34:1311:2:77:0,-3.52794,-110.934 0/0:31:31,0:31:1207:0:0:0,-9.33193,-108.713 0/0:48:48,0:48:1847:0:0:0,-14.4494,-166.365 dDocent_Contig_9102 14 . A C 1526.83 . AB=0.26971;ABP=114.026;AC=5;AF=0.416667;AN=12;AO=70;CIGAR=1X;DP=328;DPB=328;DPRA=0;EPP=155.013;EPPR=563.25;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.371429;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2783;QR=10291;RO=258;RPL=0;RPP=155.013;RPPR=563.25;RPR=70;RUN=1;SAF=70;SAP=155.013;SAR=0;SRF=258;SRP=563.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:66:35,31:35:1379:31:1243:-92.2737,0,-104.499 0/1:79:67,12:67:2673:12:479:-19.6789,0,-216.915 0/0:87:82,5:82:3256:5:197:0,-8.0864,-275.001 0/1:62:50,12:50:2012:12:463:-23.3452,0,-162.604 0/1:32:23,9:23:934:9:363:-23.4017,0,-74.7284 0/1:2:1,1:1:37:1:38:-3.19521,0,-3.09577 dDocent_Contig_9103 10 . T G 408.753 . AB=0.169014;ABP=138.131;AC=3;AF=0.25;AN=12;AO=27;CIGAR=1X;DP=274;DPB=274;DPRA=1.00549;EPP=61.6401;EPPR=539.364;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.874494;PAO=0;PQA=0;PQR=0;PRO=0;QA=1094;QR=9836;RO=247;RPL=0;RPP=61.6401;RPPR=539.364;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=247;SRP=539.364;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:56:45,11:45:1746:11:449:-23.908,0,-140.493 0/1:67:61,6:61:2451:6:242:-1.98852,0,-200.563 0/0:41:38,3:38:1516:3:120:0,-1.15492,-125.494 0/0:56:56,0:56:2242:0:0:0,-16.8577,-201.943 0/1:19:12,7:12:485:7:283:-20.1238,0,-38.2808 0/0:35:35,0:35:1396:0:0:0,-10.536,-125.897 dDocent_Contig_9104 18 . C T 1488.7 . AB=0.29798;ABP=73.1993;AC=2;AF=0.166667;AN=12;AO=78;CIGAR=1X;DP=845;DPB=845;DPRA=0;EPP=172.385;EPPR=1659.86;GTI=0;LEN=1;MEANALT=1;MQM=59.9872;MQMR=59.7784;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994785;PAO=0;PQA=0;PQR=0;PRO=0;QA=3090;QR=30599;RO=767;RPL=0;RPP=172.385;RPPR=1668.53;RPR=78;RUN=1;SAF=78;SAP=172.385;SAR=0;SRF=766;SRP=1659.86;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:127:109,18:109:4369:18:721:-26.9869,0,-354.91 0/0:182:180,2:180:7169:2:82:0,-47.0078,-637.075 0/0:232:227,5:227:9074:5:183:0,-53.0191,-799.251 0/0:186:177,9:177:7068:9:359:0,-23.3197,-601.391 0/0:47:44,3:44:1732:3:120:0,-2.96072,-142.192 0/1:71:30,41:30:1187:41:1625:-125.105,0,-85.7303 dDocent_Contig_9105 22 . T C 350.874 . AB=0.165289;ABP=120.754;AC=1;AF=0.0833333;AN=12;AO=23;CIGAR=1X;DP=462;DPB=462;DPRA=1.26471;EPP=52.9542;EPPR=956.287;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.972665;PAO=0;PQA=0;PQR=0;PRO=0;QA=912;QR=17600;RO=439;RPL=0;RPP=52.9542;RPPR=956.287;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=439;SRP=956.287;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:97:97,0:97:3891:0:0:0,-29.1999,-350.162 0/1:121:101,20:101:4059:20:808:-36.6103,0,-328.85 0/0:55:55,0:55:2204:0:0:0,-16.5566,-198.525 0/0:83:82,1:82:3279:1:27:0,-22.2857,-292.471 0/0:52:52,0:52:2075:0:0:0,-15.6536,-186.926 0/0:54:52,2:52:2092:2:77:0,-8.94679,-181.148 dDocent_Contig_9106 48 . C G 102.033 . AB=0.128205;ABP=96.662;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=281;DPB=281;DPRA=2.48936;EPP=35.5824;EPPR=580.622;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=563;QR=10310;RO=266;RPL=0;RPP=35.5824;RPPR=580.622;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=266;SRP=580.622;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:1139:0:0:0,-8.72987,-102.79 0/1:48:41,7:41:1588:7:282:-11.3026,0,-128.704 0/0:132:129,3:129:4973:3:95:0,-30.8754,-438.62 0/0:18:18,0:18:687:0:0:0,-5.41854,-62.1489 0/0:24:22,2:22:872:2:67:0,-0.865045,-72.4271 0/1:30:27,3:27:1051:3:119:-2.06411,0,-85.8464 dDocent_Contig_9107 20 . T G 11101.7 . AB=0.0703125;ABP=824.098;AC=7;AF=0.583333;AN=12;AO=36;CIGAR=1X1M;DP=601;DPB=601;DPRA=0;EPP=81.1833;EPPR=296.159;GTI=0;LEN=1;MEANALT=2.4;MQM=49.5833;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.985185;PAO=0;PQA=0;PQR=0;PRO=0;QA=1396;QR=5130;RO=135;RPL=0;RPP=81.1833;RPPR=296.159;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=135;SRP=296.159;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:89:38,51,0:38:1431:51,0:1980,0:-133.038,0,-102.271,-144.477,-117.623,-261.737 1|1:95:10,68,17:10:368:68,17:2629,645:-211.333,-20.7535,-30.3643,-163.505,0,-188.47 0|1:129:37,82,6:37:1419:82,6:3204,243:-230.672,0,-91.7661,-222.145,-96.786,-336.804 0|1:134:33,97,3:33:1253:97,3:3726,121:-256.194,0,-73.6021,-256.41,-93.0842,-358.258 0|1:72:9,56,7:9:346:56,7:2216,274:-146.169,0,-11.5477,-126.86,-6.39368,-153.165 0|1:82:8,71,3:8:313:71,3:2776,113:-143.982,0,-4.38697,-137.666,-17.0492,-162.511 dDocent_Contig_9108 8 . T C 569.489 . AB=0.198675;ABP=122.096;AC=2;AF=0.166667;AN=12;AO=49;CIGAR=1X;DP=539;DPB=539;DPRA=2.46154;EPP=109.412;EPPR=1067.03;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.842857;PAO=0;PQA=0;PQR=0;PRO=0;QA=1905;QR=18851;RO=490;RPL=0;RPP=109.412;RPPR=1067.03;RPR=49;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=490;SRP=1067.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1158:0:0:0,-9.0309,-104.52 0/1:53:34,19:34:1301:19:737:-50.7061,0,-101.424 0/0:61:61,0:61:2365:0:0:0,-18.3628,-213.057 0/1:98:87,11:87:3360:11:429:-9.4647,0,-273.031 0/0:128:121,7:121:4628:7:273:0,-13.5938,-391.627 0/0:169:157,12:157:6039:12:466:0,-8.58203,-501.155 dDocent_Contig_9109 40 . C T 777.641 . AB=0.138425;ABP=478.812;AC=3;AF=0.25;AN=12;AO=58;CIGAR=1X;DP=560;DPB=560;DPRA=2.97163;EPP=128.956;EPPR=1093.09;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2313;QR=19932;RO=502;RPL=0;RPP=128.956;RPPR=1093.09;RPR=58;RUN=1;SAF=58;SAP=128.956;SAR=0;SRF=502;SRP=1093.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:161:138,23:138:5493:23:897:-32.5606,0,-445.737 0/1:128:111,17:111:4386:17:681:-23.0864,0,-356.149 0/0:73:73,0:73:2867:0:0:0,-21.9752,-258.123 0/1:130:112,18:112:4447:18:735:-27.3389,0,-361.046 0/0:10:10,0:10:409:0:0:0,-3.0103,-37.1706 0/0:58:58,0:58:2330:0:0:0,-17.4597,-209.856 dDocent_Contig_9110 30 . G T 450.427 . AB=0.133829;ABP=316.292;AC=3;AF=0.25;AN=12;AO=41;CIGAR=1X;DP=530;DPB=530;DPRA=1.49248;EPP=92.0407;EPPR=1064.86;GTI=0;LEN=1;MEANALT=1;MQM=56.1951;MQMR=59.771;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997955;PAO=0;PQA=0;PQR=0;PRO=0;QA=1635;QR=19390;RO=489;RPL=0;RPP=92.0407;RPPR=1064.86;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=489;SRP=1064.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:98:85,13:85:3344:13:513:-16.9452,0,-271.091 0/1:82:75,7:75:2980:7:281:-0.934095,0,-243.561 0/1:89:73,16:73:2910:16:643:-31.3132,0,-235.184 0/0:118:118,0:118:4664:0:0:0,-35.5215,-419.682 0/0:128:123,5:123:4890:5:198:0,-20.3645,-421.791 0/0:15:15,0:15:602:0:0:0,-4.51545,-54.5189 dDocent_Contig_9111 14 . G A 201.865 . AB=0.144144;ABP=125.102;AC=3;AF=0.25;AN=12;AO=29;CIGAR=1X;DP=331;DPB=331;DPRA=0;EPP=65.983;EPPR=658.795;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.862069;PAIREDR=0.943709;PAO=0;PQA=0;PQR=0;PRO=0;QA=1124;QR=12033;RO=302;RPL=0;RPP=65.983;RPPR=658.795;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=302;SRP=658.795;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:64:61,3:61:2418:3:89:0,-10.9625,-209.469 0/0:52:50,2:50:2002:2:82:0,-7.87388,-172.588 0/1:26:21,5:21:848:5:194:-10.0017,0,-68.8045 0/0:104:96,8:96:3826:8:312:0,-2.86613,-315.898 0/1:47:40,7:40:1599:7:284:-11.7856,0,-129.99 0/1:38:34,4:34:1340:4:163:-3.61929,0,-109.426 dDocent_Contig_9112 17 . A T 195.249 . AB=0.151163;ABP=93.9091;AC=2;AF=0.166667;AN=12;AO=19;CIGAR=1X;DP=242;DPB=242;DPRA=1.96939;EPP=44.2683;EPPR=442.626;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.932432;PAO=0;PQA=0;PQR=0;PRO=0;QA=772;QR=8885;RO=222;RPL=0;RPP=44.2683;RPPR=485.077;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=217;SRP=442.626;SRR=5;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:19,0:19:764:0:0:0,-5.71957,-68.72 0/1:68:58,10:58:2330:10:409:-16.7005,0,-189.384 0/1:18:15,3:15:610:3:123:-6.04625,0,-49.8191 0/0:74:69,5:69:2765:5:199:0,-3.98816,-230.671 0/0:29:29,0:29:1137:0:0:0,-8.72987,-102.617 0/0:33:32,1:32:1279:1:41:0,-5.83942,-111.282 dDocent_Contig_9114 27 . A T 163.12 . AB=0.269231;ABP=15.0369;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=192;DPB=192;DPRA=1.25424;EPP=20.3821;EPPR=400.39;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.625;PAIREDR=0.79235;PAO=0;PQA=0;PQR=0;PRO=0;QA=321;QR=7355;RO=183;RPL=0;RPP=20.3821;RPPR=400.39;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=183;SRP=400.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:29,0:29:1154:0:0:0,-8.72987,-103.962 0/0:48:47,1:47:1882:1:40:0,-10.4538,-165.586 0/1:26:19,7:19:768:7:281:-17.8349,0,-61.6114 0/0:38:38,0:38:1535:0:0:0,-11.4391,-138.385 0/0:13:13,0:13:516:0:0:0,-3.91339,-46.7846 0/0:37:37,0:37:1500:0:0:0,-11.1381,-135.239 dDocent_Contig_9115 23 . C A 519.933 . AB=0.177215;ABP=145.998;AC=1;AF=0.0833333;AN=12;AO=38;CIGAR=1X;DP=784;DPB=784;DPRA=1.08704;EPP=85.5263;EPPR=1620.76;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.957047;PAO=0;PQA=0;PQR=0;PRO=0;QA=1527;QR=29850;RO=745;RPL=0;RPP=85.5263;RPPR=1620.76;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=745;SRP=1620.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:85:80,5:80:3224:5:202:0,-7.02568,-271.649 0/0:101:100,1:100:3954:1:41:0,-26.3095,-351.749 0/0:101:100,0:100:4024:0:0:0,-30.103,-361.719 0/0:146:146,0:146:5865:0:0:0,-43.9504,-527.619 0/1:158:130,28:130:5201:28:1120:-53.5161,0,-420.365 0/0:193:189,4:189:7582:4:164:0,-42.9489,-666.811 dDocent_Contig_9116 83 . C T 1137.86 . AB=0.401639;ABP=13.2625;AC=4;AF=0.333333;AN=12;AO=49;CIGAR=1X;DP=147;DPB=147;DPRA=2.44;EPP=109.412;EPPR=215.815;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.989796;PAO=0;PQA=0;PQR=0;PRO=0;QA=1738;QR=3526;RO=98;RPL=49;RPP=109.412;RPPR=215.815;RPR=0;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=98;SRP=215.815;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:8:8,0:8:285:0:0:0,-2.40824,-25.9938 0/1:13:10,3:10:356:3:100:-5.41722,0,-28.4674 0/1:40:31,9:31:1112:9:335:-18.4602,0,-88.3383 0/0:17:17,0:17:612:0:0:0,-5.11751,-55.4044 0/1:40:22,18:22:796:18:626:-44.6156,0,-59.9169 0/1:29:10,19:10:365:19:677:-52.515,0,-24.4649 dDocent_Contig_9117 131 . G C 212.218 . AB=0.333333;ABP=10.2485;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=155;DPB=155;DPRA=1.2;EPP=24.725;EPPR=307.077;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8819;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.840278;PAO=0;PQA=0;PQR=0;PRO=0;QA=346;QR=4988;RO=144;RPL=0;RPP=24.725;RPPR=315.702;RPR=10;RUN=1;SAF=0;SAP=24.725;SAR=10;SRF=1;SRP=307.077;SRR=143;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:20,10:20:684:10:346:-22.4436,0,-52.8496 0/0:36:36,0:36:1257:0:0:0,-10.8371,-113.278 0/0:28:28,0:28:976:0:0:0,-8.42884,-88.1544 0/0:31:30,0:30:1034:0:0:0,-9.0309,-93.0015 0/0:15:15,0:15:518:0:0:0,-4.51545,-46.9483 0/0:15:15,0:15:519:0:0:0,-4.51545,-47.0386 dDocent_Contig_9118 24 . A G 454.793 . AB=0.05;ABP=354.789;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=2M1X2M1X6M;DP=377;DPB=372.333;DPRA=1.11111;EPP=24.725;EPPR=628.394;GTI=0;LEN=1;MEANALT=6.33333;MQM=55;MQMR=60;NS=6;NUMALT=7;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=388;QR=11270;RO=288;RPL=0;RPP=24.725;RPPR=628.394;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=288;SRP=628.394;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:87:70,0,1,10,3,1,1,0:70:2714:0,1,10,3,1,1,0:0,28,388,121,36,38,0:-10.8039,-31.876,-254.848,-29.6646,-252.631,-252.33,0,-222.981,-220.765,-219.971,-21.9242,-244.9,-242.684,-213.033,-243.997,-29.2111,-252.18,-249.964,-220.314,-242.233,-251.879,-28.7812,-251.753,-249.536,-219.886,-241.805,-249.086,-251.452,-31.876,-254.848,-252.631,-222.981,-244.9,-252.18,-251.753,-254.848 0|0:96:77,2,0,1,0,3,11,0:77:3004:2,0,1,0,3,11,0:50,0,40,0,50,439,0:-13.0592,-32.8949,-279.25,-36.2385,-279.853,-283.206,-32.94,-276.557,-279.911,-279.61,-36.2385,-279.853,-283.206,-279.911,-283.206,-33.4743,-277.059,-280.413,-277.117,-280.413,-279.51,0,-243.697,-247.051,-243.756,-247.051,-244.258,-243.74,-36.2385,-279.853,-283.206,-279.911,-283.206,-280.413,-247.051,-283.206 0|0:60:51,1,3,0,0,2,3,0:51:2016:1,3,0,0,2,3,0:25,120,0,0,36,120,0:0,-13.6868,-179.336,-5.47584,-169.797,-170.57,-15.3525,-179.637,-171.473,-181.313,-15.3525,-179.637,-171.473,-181.313,-181.313,-13.2998,-177.543,-169.379,-179.219,-179.219,-178.617,-5.4299,-169.752,-161.587,-171.428,-171.428,-169.334,-170.525,-15.3525,-179.637,-171.473,-181.313,-181.313,-179.219,-171.428,-181.313 0|0:74:52,4,0,9,1,4,2,0:52:2045:4,0,9,1,4,2,0:98,0,359,41,98,81,0:-13.9384,-23.081,-190.123,-29.592,-191.327,-197.853,0,-161.784,-168.309,-165.599,-26.2143,-187.953,-194.479,-164.934,-194.178,-23.0807,-184.801,-191.327,-161.783,-187.953,-190.123,-22.9048,-184.647,-191.173,-161.628,-187.799,-184.647,-190.571,-29.592,-191.327,-197.853,-168.309,-194.479,-191.327,-191.173,-197.853 0|1:21:17,0,3,0,0,0,1,0:17:665:0,3,0,0,0,1,0:0,102,0,0,0,41,0:-3.06579,-8.1833,-62.8866,0,-54.6577,-53.7546,-8.1833,-62.8866,-54.6577,-62.8866,-8.1833,-62.8866,-54.6577,-62.8866,-62.8866,-8.1833,-62.8866,-54.6577,-62.8866,-62.8866,-62.8866,-4.78148,-59.5013,-51.2726,-59.5013,-59.5013,-59.5013,-59.2002,-8.1833,-62.8866,-54.6577,-62.8866,-62.8866,-62.8866,-59.5013,-62.8866 0|0:39:21,2,2,0,6,1,0,6:21:826:2,2,0,6,1,0,6:55,79,0,226,33,0,244:-13.826,-16.3514,-83.7022,-13.6578,-77.8178,-81.0192,-20.1476,-84.3043,-81.6212,-88.1081,-1.65603,-65.8208,-63.1361,-69.6231,-67.8169,-17.7533,-81.9086,-79.2253,-85.712,-67.2275,-85.411,-20.1476,-84.3043,-81.6212,-88.1081,-69.6231,-85.712,-88.1081,0,-64.174,-61.4894,-67.9767,-49.4908,-65.5809,-67.9767,-66.1706 dDocent_Contig_9119 45 . G A 363.088 . AB=0.52;ABP=3.09716;AC=1;AF=0.1;AN=10;AO=13;CIGAR=1X;DP=116;DPB=116;DPRA=1.0989;EPP=31.2394;EPPR=226.672;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=501;QR=3947;RO=103;RPL=0;RPP=31.2394;RPPR=226.672;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=103;SRP=226.672;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:997:0:0:0,-7.82678,-90.0318 0/0:24:24,0:24:913:0:0:0,-7.22472,-82.4829 0/0:29:29,0:29:1133:0:0:0,-8.72987,-102.26 0/1:25:12,13:12:452:13:501:-37.9109,0,-33.4978 ./.:.:.:.:.:.:.:. 0/0:12:12,0:12:452:0:0:0,-3.61236,-41.0245 dDocent_Contig_9120 134 . G A 310.584 . AB=0.326531;ABP=15.8176;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=123;DPB=123;DPRA=3.31081;EPP=37.7539;EPPR=233.186;GTI=0;LEN=1;MEANALT=2;MQM=59.5;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.875;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=523;QR=3758;RO=106;RPL=0;RPP=37.7539;RPPR=233.186;RPR=16;RUN=1;SAF=0;SAP=37.7539;SAR=16;SRF=0;SRP=233.186;SRR=106;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:529:0:0:0,-4.51545,-47.9423 0/0:9:9,0:9:323:0:0:0,-2.70927,-29.4151 0/0:9:9,0:9:317:0:0:0,-2.70927,-28.8699 0/0:7:7,0:7:250:0:0:0,-2.10721,-22.8467 0/0:34:34,0:34:1213:0:0:0,-10.235,-109.477 0/1:49:32,16:32:1126:16:523:-32.5813,0,-86.8482 dDocent_Contig_9121 14 . G C 350.235 . AB=0.127049;ABP=297.797;AC=4;AF=0.333333;AN=12;AO=32;CIGAR=1X;DP=335;DPB=335;DPRA=1.35814;EPP=72.4974;EPPR=658.795;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1277;QR=11885;RO=302;RPL=0;RPP=72.4974;RPPR=658.795;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=302;SRP=658.795;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:33,3:33:1321:3:120:-0.35023,0,-108.318 0/0:43:43,0:43:1690:0:0:0,-12.9443,-152.327 0/1:117:101,16:101:3943:16:643:-22.9821,0,-319.646 0/0:48:47,1:47:1866:1:40:0,-10.4538,-164.149 0/1:45:37,8:37:1437:8:316:-15.2583,0,-116.04 0/1:46:41,4:41:1628:4:158:-0.662367,0,-132.815 dDocent_Contig_9122 7 . A T 99.2855 . AB=0.122222;ABP=114.576;AC=1;AF=0.0833333;AN=12;AO=52;CIGAR=1X;DP=1525;DPB=1525;DPRA=0.768254;EPP=115.927;EPPR=3197.25;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.3413;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.996601;PAO=0;PQA=0;PQR=0;PRO=0;QA=1979;QR=55834;RO=1471;RPL=0;RPP=115.927;RPPR=3197.25;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=1471;SRP=3197.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:90:79,11:79:3008:11:421:-11.1504,0,-243.728 0/0:256:241,15:241:9077:15:560:0,-26.325,-765.705 0/0:184:173,11:173:6602:11:428:0,-16.5141,-554.709 0/0:245:238,7:238:9021:7:271:0,-48.9959,-785.782 0/0:315:313,0:313:11904:0:0:0,-94.2224,-1070.01 0/0:435:427,8:427:16222:8:299:0,-103.683,-1431.11 dDocent_Contig_9123 14 . C T 750.964 . AB=0.344444;ABP=21.9262;AC=3;AF=0.25;AN=12;AO=35;CIGAR=1X;DP=184;DPB=184;DPRA=1.96471;EPP=79.0118;EPPR=324.388;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.542857;PAIREDR=0.513514;PAO=0;PQA=0;PQR=0;PRO=0;QA=1330;QR=5919;RO=148;RPL=0;RPP=79.0118;RPPR=324.388;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=148;SRP=324.388;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:24,7:24:939:7:269:-15.2422,0,-75.4802 0/0:42:40,2:40:1586:2:72:0,-5.80689,-136.138 0/0:17:17,0:17:690:0:0:0,-5.11751,-62.4287 0/0:35:33,2:33:1328:2:77:0,-3.22722,-112.468 0/1:31:16,14:16:651:14:544:-40.0421,0,-49.6607 0/1:28:18,10:18:725:10:368:-25.034,0,-57.1446 dDocent_Contig_9124 14 . A C 3524.45 . AB=0.392749;ABP=36.081;AC=6;AF=0.5;AN=12;AO=130;CIGAR=1X1M1X3M1X;DP=331;DPB=331;DPRA=0;EPP=285.302;EPPR=435.133;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.761538;PAIREDR=0.748744;PAO=0;PQA=0;PQR=0;PRO=0;QA=5129;QR=7845;RO=199;RPL=0;RPP=285.302;RPPR=435.133;RPR=130;RUN=1;SAF=130;SAP=285.302;SAR=0;SRF=199;SRP=435.133;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:41:25,16:25:993:16:624:-44.1527,0,-77.3287 0|1:62:38,24:38:1510:24:948:-66.9642,0,-117.491 0|1:32:20,12:20:753:12:479:-33.8289,0,-58.4513 0|1:80:41,38:41:1630:38:1516:-112.517,0,-122.771 0|1:67:46,21:46:1810:21:809:-52.9565,0,-142.96 0|1:49:29,19:29:1149:19:753:-53.2474,0,-88.8441 dDocent_Contig_9125 14 . C T 4621.97 . AB=0.0555556;ABP=126.543;AC=0;AF=0;AN=12;AO=4;CIGAR=1X1M2X;DP=374;DPB=374;DPRA=0;EPP=11.6962;EPPR=406.904;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=156;QR=7329;RO=186;RPL=0;RPP=11.6962;RPPR=406.904;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=186;SRP=406.904;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:88:45,0,40,3:45:1742:0,40,3:0,1614,122:-119.498,-133.044,-276.123,0,-143.069,-131.028,-122.981,-266.059,-133.004,-265.156 0|0:72:36,0,24,12:36:1434:0,24,12:0,946,485:-66.9769,-77.814,-195.899,0,-118.08,-110.855,-37.8258,-155.913,-78.0939,-152.3 0|0:46:13,0,27,6:13:521:0,27,6:0,1081,241:-85.1051,-89.0184,-131.943,0,-42.9238,-34.796,-69.1593,-112.084,-23.0646,-110.278 0|0:37:12,0,23,2:12:478:0,23,2:0,915,79:-71.7264,-75.3388,-114.7,0,-39.3639,-32.4402,-68.8384,-108.2,-32.8638,-107.598 0|0:72:44,4,24,0:44:1725:4,24,0:156,953,0:-65.2137,-65.638,-206.272,0,-129.021,-134.618,-78.459,-207.476,-141.843,-220.298 0|0:59:36,0,23,0:36:1429:0,23,0:0,915,0:-64.8991,-75.7361,-193.374,0,-118.035,-111.111,-75.7361,-193.374,-118.035,-193.374 dDocent_Contig_9126 16 . G C 6430.58 . AB=0.6;ABP=33.4109;AC=4;AF=0.333333;AN=12;AO=212;CIGAR=1X;DP=462;DPB=462;DPRA=0.874419;EPP=463.362;EPPR=545.878;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.962264;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8470;QR=9996;RO=250;RPL=0;RPP=463.362;RPPR=545.878;RPR=212;RUN=1;SAF=212;SAP=463.362;SAR=0;SRF=250;SRP=545.878;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:14:2,12:2:81:12:489:-40.1469,0,-3.47131 0/1:103:39,64:39:1561:64:2555:-199.076,0,-109.718 0/0:26:24,2:24:959:2:82:0,-0.0471021,-78.8285 0/1:166:64,102:64:2543:102:4074:-316.655,0,-179.04 0/0:86:86,0:86:3443:0:0:0,-25.8886,-309.905 0/1:67:35,32:35:1409:32:1270:-94.3979,0,-106.893 dDocent_Contig_9127 15 . C A 8122.03 . AB=0.311443;ABP=313.371;AC=4;AF=0.333333;AN=12;AO=328;CIGAR=1X;DP=1325;DPB=1325;DPRA=3.33333;EPP=715.253;EPPR=2167.97;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998997;PAO=0;PQA=0;PQR=0;PRO=0;QA=13064;QR=40125;RO=997;RPL=0;RPP=715.253;RPPR=2167.97;RPR=328;RUN=1;SAF=328;SAP=715.253;SAR=0;SRF=997;SRP=2167.97;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:265:216,49:216:8592:49:1975:-98.1675,0,-693.008 0/1:244:78,166:78:3136:166:6608:-520.97,0,-208.853 0/1:182:127,55:127:5110:55:2167:-140.419,0,-404.962 0/1:314:271,43:271:10929:43:1713:-59.8688,0,-888.301 0/0:75:75,0:75:3036:0:0:0,-22.5772,-273.31 0/0:245:230,15:230:9322:15:601:0,-19.3265,-783.923 dDocent_Contig_9128 72 . G T 2103.77 . AB=0.513514;ABP=3.24505;AC=2;AF=0.166667;AN=12;AO=76;CIGAR=1X;DP=380;DPB=380;DPRA=1.27586;EPP=168.042;EPPR=658.795;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2864;QR=10850;RO=302;RPL=76;RPP=168.042;RPPR=658.795;RPR=0;RUN=1;SAF=76;SAP=168.042;SAR=0;SRF=302;SRP=658.795;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1248:0:0:0,-10.536,-112.61 0/0:81:81,0:81:2897:0:0:0,-24.3834,-260.923 0/0:85:85,0:85:3059:0:0:0,-25.5875,-275.501 0/0:31:31,0:31:1085:0:0:0,-9.33193,-97.9366 0/1:77:40,36:40:1452:36:1372:-100.493,0,-107.685 0/1:71:30,40:30:1109:40:1492:-113.106,0,-78.6605 dDocent_Contig_9129 14 . C T 310.753 . AB=0.143836;ABP=163.878;AC=2;AF=0.166667;AN=12;AO=21;CIGAR=2X;DP=486;DPB=486;DPRA=0.858824;EPP=48.6112;EPPR=997.545;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99345;PAO=0;PQA=0;PQR=0;PRO=0;QA=854;QR=18328;RO=458;RPL=0;RPP=48.6112;RPPR=997.545;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=458;SRP=997.545;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:40:39,0:39:1554:0:0:0,-11.7402,-139.701 0|0:106:102,0:102:4083:0:0:0,-30.7051,-367.029 0|1:52:37,13:37:1489:13:530:-32.586,0,-118.794 0|1:94:86,8:86:3433:8:324:-1.23237,0,-280.718 0|0:98:98,0:98:3932:0:0:0,-29.5009,-353.863 0|0:96:96,0:96:3837:0:0:0,-28.8989,-345.331 dDocent_Contig_9130 125 . G A 217.681 . AB=0.125;ABP=237.529;AC=2;AF=0.2;AN=10;AO=38;CIGAR=1X;DP=568;DPB=568;DPRA=3.92647;EPP=85.5263;EPPR=1149.55;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1431;QR=19954;RO=528;RPL=0;RPP=85.5263;RPPR=1149.55;RPR=38;RUN=1;SAF=0;SAP=85.5263;SAR=38;SRF=0;SRP=1149.55;SRR=528;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:64:56,8:56:2134:8:309:-8.90705,0,-173.022 0/0:168:163,5:163:6191:5:187:0,-33.3822,-539.935 0/1:128:112,16:112:4241:16:604:-16.1621,0,-343.232 0/0:174:163,9:163:6118:9:331:0,-21.9019,-520.44 ./.:.:.:.:.:.:.:. 0/0:34:34,0:34:1270:0:0:0,-10.235,-114.581 dDocent_Contig_9131 87 . A G 6192.08 . AB=0.876106;ABP=141.85;AC=3;AF=0.25;AN=12;AO=209;CIGAR=1X;DP=574;DPB=574;DPRA=1.32754;EPP=456.848;EPPR=795.598;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.990431;PAIREDR=0.912329;PAO=0;PQA=0;PQR=0;PRO=0;QA=7478;QR=12894;RO=365;RPL=209;RPP=456.848;RPPR=795.598;RPR=0;RUN=1;SAF=209;SAP=456.848;SAR=0;SRF=365;SRP=795.598;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:75:75,0:75:2616:0:0:0,-22.5772,-235.67 0/0:91:91,0:91:3248:0:0:0,-27.3937,-292.505 0/0:82:82,0:82:2870:0:0:0,-24.6845,-258.507 0/0:97:97,0:97:3470:0:0:0,-29.1999,-312.463 1/1:116:6,110:6:206:110:3946:-336.409,-16.0511,0 0/1:113:14,99:14:484:99:3532:-284.021,0,-9.86469 dDocent_Contig_9132 34 . C T 50.4284 . AB=0.113208;ABP=71.8828;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=268;DPB=268;DPRA=1.23256;EPP=16.0391;EPPR=571.936;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.984733;PAO=0;PQA=0;PQR=0;PRO=0;QA=246;QR=10446;RO=262;RPL=0;RPP=16.0391;RPPR=571.936;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=262;SRP=571.936;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:821:0:0:0,-6.32163,-74.1967 0/0:2:2,0:2:82:0:0:0,-0.60206,-7.77968 0/0:39:39,0:39:1569:0:0:0,-11.7402,-141.442 0/0:38:38,0:38:1524:0:0:0,-11.4391,-137.394 0/1:53:47,6:47:1836:6:246:-6.56553,0,-149.488 0/0:115:115,0:115:4614:0:0:0,-34.6184,-415.165 dDocent_Contig_9133 44 . C A 6971.8 . AB=0.318605;ABP=248.801;AC=5;AF=0.416667;AN=12;AO=274;CIGAR=1X;DP=878;DPB=878;DPRA=9.55556;EPP=597.994;EPPR=1314.58;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10709;QR=23567;RO=604;RPL=0;RPP=597.994;RPPR=1314.58;RPR=274;RUN=1;SAF=274;SAP=597.994;SAR=0;SRF=604;SRP=1314.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:129:108,21:108:4212:21:834:-36.5446,0,-340.239 0/1:272:158,114:158:6148:114:4471:-320.485,0,-471.252 0/1:210:145,65:145:5720:65:2541:-165.62,0,-451.409 0/1:207:137,70:137:5291:70:2710:-181.73,0,-413.783 0/0:18:18,0:18:701:0:0:0,-5.41854,-63.4149 0/1:42:38,4:38:1495:4:153:-1.49724,0,-122.156 dDocent_Contig_9134 23 . A G 219.612 . AB=0.117925;ABP=271.822;AC=3;AF=0.25;AN=12;AO=27;CIGAR=1X;DP=304;DPB=304;DPRA=2.13846;EPP=61.6401;EPPR=602.337;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.814815;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1077;QR=10968;RO=276;RPL=0;RPP=61.6401;RPPR=602.337;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=276;SRP=602.337;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:68:61,7:61:2436:7:275:-4.64486,0,-198.919 0/1:58:50,8:50:1965:8:321:-11.7973,0,-159.588 0/0:48:47,1:47:1870:1:41:0,-10.3549,-164.413 0/1:86:76,10:76:3007:10:403:-10.7408,0,-244.826 0/0:18:17,1:17:679:1:37:0,-1.72071,-57.743 0/0:26:25,0:25:1011:0:0:0,-7.52575,-91.0859 dDocent_Contig_9136 41 . A G 207.302 . AB=0.114833;ABP=272.325;AC=1;AF=0.0833333;AN=12;AO=42;CIGAR=1X;DP=1018;DPB=1018;DPRA=1.01039;EPP=94.2121;EPPR=2113.69;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.952381;PAIREDR=0.969262;PAO=0;PQA=0;PQR=0;PRO=0;QA=1656;QR=38252;RO=976;RPL=0;RPP=94.2121;RPPR=2113.69;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=976;SRP=2122.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:96:92,4:92:3575:4:161:0,-14.024,-306.955 0/0:167:162,5:162:6319:5:204:0,-31.528,-549.791 0/0:121:121,0:121:4725:0:0:0,-36.4246,-425.22 0/0:216:216,0:216:8461:0:0:0,-65.0225,-761.106 0/1:209:185,24:185:7310:24:943:-22.253,0,-594.671 0/0:209:200,9:200:7862:9:348:0,-31.2396,-675.561 dDocent_Contig_9137 16 . T C 127.092 . AB=0.118644;ABP=152.069;AC=3;AF=0.25;AN=12;AO=24;CIGAR=1X;DP=269;DPB=269;DPRA=0;EPP=55.1256;EPPR=535.021;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8571;NS=6;NUMALT=1;ODDS=0;PAIRED=0.333333;PAIREDR=0.57551;PAO=0;PQA=0;PQR=0;PRO=0;QA=976;QR=9581;RO=245;RPL=0;RPP=55.1256;RPPR=535.021;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=245;SRP=535.021;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:26,2:26:1033:2:82:0,-0.649162,-85.4474 0/1:55:50,5:50:1955:5:203:-2.09641,0,-159.599 0/1:22:20,2:20:793:2:81:-1.06307,0,-65.066 0/1:41:34,7:34:1324:7:286:-13.7726,0,-107.064 0/0:63:58,5:58:2243:5:201:0,-0.494372,-183.581 0/0:60:57,3:57:2233:3:123:0,-6.59701,-189.689 dDocent_Contig_9138 26 . T G 186.329 . AB=0.173333;ABP=72.5264;AC=4;AF=0.333333;AN=12;AO=13;CIGAR=1X;DP=124;DPB=124;DPRA=0.765306;EPP=31.2394;EPPR=244.044;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.923077;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=519;QR=4454;RO=111;RPL=0;RPP=31.2394;RPPR=244.044;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=111;SRP=244.044;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:18,5:18:717:5:199:-11.3638,0,-57.9299 0/1:21:18,3:18:729:3:118:-4.67995,0,-59.6127 0/0:21:21,0:21:841:0:0:0,-6.32163,-76 0/0:28:28,0:28:1108:0:0:0,-8.42884,-99.9987 0/1:19:17,2:17:695:2:80:-1.87201,0,-57.1576 0/1:12:9,3:9:364:3:122:-7.76013,0,-29.512 dDocent_Contig_9139 16 . A C 393.044 . AB=0.0894085;ABP=1067.57;AC=1;AF=0.0833333;AN=12;AO=89;CIGAR=1M4D1X2M1X2M;DP=1103;DPB=1077.55;DPRA=0;EPP=196.271;EPPR=1766.25;GTI=0;LEN=1;MEANALT=7;MQM=29.3708;MQMR=58.4323;NS=6;NUMALT=5;ODDS=0;PAIRED=0.58427;PAIREDR=0.330049;PAO=0;PQA=0;PQR=0;PRO=0;QA=2511;QR=31787;RO=812;RPL=0;RPP=196.271;RPPR=1766.25;RPR=89;RUN=1;SAF=89;SAP=196.271;SAR=0;SRF=812;SRP=1766.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:163:115,17,13,0,0,12:115:4470:17,13,0,0,12:448,355,0,0,461:-3.25304,-7.28822,-366.882,-13.3659,-347.493,-374.171,-37.8715,-372,-378.085,-402.594,-37.8715,-372,-378.085,-402.594,-402.594,0,-334.162,-340.246,-364.755,-364.755,-361.143 0|0:230:188,17,16,0,0,2:188:7354:17,16,0,0,2:500,408,0,0,75:0,-21.3065,-616.51,-29.0312,-594.059,-624.514,-56.5936,-621.628,-629.33,-656.901,-56.5936,-621.628,-629.33,-656.901,-656.901,-50.4441,-615.484,-623.187,-650.757,-650.757,-650.155 0|0:142:95,9,14,2,9,13:95:3716:9,14,2,9,13:229,366,44,346,467:-9.50982,-22.4526,-324.153,-13.1511,-301.895,-313.341,-35.2937,-324.046,-314.74,-339.106,-9.68529,-298.46,-289.153,-311.306,-311.412,0,-288.78,-279.474,-301.626,-276.039,-300.528 0|1:191:127,29,2,2,7,18:127:4983:29,2,2,7,18:887,48,44,251,646:-26.2827,0,-399.955,-61.3388,-405.509,-469.431,-61.6989,-405.868,-467.217,-469.791,-44.0415,-388.219,-449.567,-449.927,-450.636,-11.8251,-356.017,-417.364,-417.723,-400.074,-415.121 0|0:146:115,7,5,3,10,2:115:4492:7,5,3,10,2:196,147,66,378,72:0,-20.6845,-382.335,-25.0912,-374.908,-387.345,-30.403,-380.218,-384.627,-393.258,-3.60134,-353.459,-357.867,-363.178,-364.391,-28.7413,-378.569,-382.977,-388.288,-361.528,-391.91 0|0:231:172,10,10,13,19,0:172:6772:10,10,13,19,0:251,256,280,722,0:-7.47667,-42.3901,-595.98,-41.9383,-581.67,-595.529,-41.4976,-581.218,-580.767,-594.174,0,-539.781,-539.33,-538.878,-550.931,-59.2538,-598.991,-598.54,-598.087,-556.651,-615.861 dDocent_Contig_9140 55 . A T 2581.23 . AB=0.292135;ABP=136.617;AC=3;AF=0.3;AN=10;AO=105;CIGAR=1X;DP=445;DPB=445;DPRA=1.23333;EPP=231.015;EPPR=741.311;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9941;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4147;QR=13505;RO=340;RPL=105;RPP=231.015;RPPR=741.311;RPR=0;RUN=1;SAF=105;SAP=231.015;SAR=0;SRF=340;SRP=741.311;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:58:41,17:41:1633:17:677:-43.8,0,-129.737 0/1:226:165,61:165:6526:61:2406:-148.662,0,-519.04 0/0:14:13,1:13:524:1:38:0,-0.417151,-43.7085 0/1:72:46,26:46:1850:26:1026:-70.9616,0,-145.028 ./.:.:.:.:.:.:.:. 0/0:75:75,0:75:2972:0:0:0,-22.5772,-267.57 dDocent_Contig_9142 7 . A T 143.43 . AB=0.157576;ABP=171.056;AC=2;AF=0.166667;AN=12;AO=54;CIGAR=1X;DP=520;DPB=520;DPRA=0;EPP=120.27;EPPR=1014.92;GTI=0;LEN=1;MEANALT=1;MQM=29.1296;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.504292;PAO=0;PQA=0;PQR=0;PRO=0;QA=2056;QR=17802;RO=466;RPL=0;RPP=120.27;RPPR=1014.92;RPR=54;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=466;SRP=1014.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:51:47,4:47:1812:4:153:0,-4.80351,-152.783 0/0:125:119,6:119:4563:6:228:0,-21.9759,-395.071 0/1:90:75,15:75:2870:15:573:-11.645,0,-231.378 0/0:84:75,9:75:2842:9:331:0,-2.19387,-232.868 0/1:75:64,11:64:2418:11:421:-5.91975,0,-195.254 0/0:95:86,9:86:3297:9:350:0,-4.65133,-272.926 dDocent_Contig_9143 9 . A T 2822.8 . AB=0.474654;ABP=4.22112;AC=5;AF=0.416667;AN=12;AO=106;CIGAR=1X;DP=274;DPB=274;DPRA=0;EPP=233.186;EPPR=365.646;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.8491;MQMR=50.3713;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4065;QR=6375;RO=167;RPL=0;RPP=233.186;RPPR=365.646;RPR=106;RUN=1;SAF=106;SAP=233.186;SAR=0;SRF=167;SRP=365.646;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:21,33:21:804:33:1279:-99.0387,0,-50.4606 0/1:45:29,16:29:1120:16:591:-39.9726,0,-85.2242 0/1:30:7,23:7:269:23:884:-70.8488,0,-14.3597 0/1:54:30,23:30:1146:23:893:-64.4309,0,-81.8602 0/1:34:26,8:26:987:8:301:-17.2105,0,-78.0232 0/0:57:54,3:54:2049:3:117:0,-6.24833,-166.129 dDocent_Contig_9144 31 . C A 1959.28 . AB=0.590909;ABP=10.9066;AC=2;AF=0.166667;AN=12;AO=65;CIGAR=1X;DP=524;DPB=524;DPRA=0.531401;EPP=144.156;EPPR=997.545;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.984615;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2576;QR=18165;RO=458;RPL=0;RPP=144.156;RPPR=997.545;RPR=65;RUN=1;SAF=65;SAP=144.156;SAR=0;SRF=458;SRP=997.545;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:109:109,0:109:4312:0:0:0,-32.8123,-388.051 0/0:125:125,0:125:4986:0:0:0,-37.6287,-448.624 0/0:56:56,0:56:2217:0:0:0,-16.8577,-199.693 0/0:124:124,0:124:4888:0:0:0,-37.3277,-439.83 0/1:35:11,24:11:442:24:951:-75.3542,0,-29.5986 0/1:75:33,41:33:1320:41:1625:-123.796,0,-96.3783 dDocent_Contig_9145 66 . C G 639.372 . AB=0.1875;ABP=206.586;AC=6;AF=0.5;AN=12;AO=45;CIGAR=1X;DP=240;DPB=240;DPRA=0;EPP=100.727;EPPR=426.447;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.844444;PAIREDR=0.8;PAO=0;PQA=0;PQR=0;PRO=0;QA=1615;QR=6921;RO=195;RPL=21;RPP=3.44459;RPPR=8.90111;RPR=24;RUN=1;SAF=21;SAP=3.44459;SAR=24;SRF=109;SRP=8.90111;SRR=86;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:19,4:19:706:4:143:-6.29594,0,-56.945 0/1:41:35,6:35:1253:6:206:-6.53058,0,-100.719 0/1:17:13,4:13:461:4:142:-8.01135,0,-36.7026 0/1:72:63,9:63:2175:9:327:-8.10154,0,-174.308 0/1:45:35,10:35:1237:10:354:-18.6498,0,-98.0736 0/1:42:30,12:30:1089:12:443:-27.5698,0,-85.6649 dDocent_Contig_9146 19 . G A 5967.59 . AB=0.373494;ABP=83.7734;AC=6;AF=0.5;AN=12;AO=217;CIGAR=1X;DP=581;DPB=581;DPRA=0;EPP=474.22;EPPR=793.426;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.997253;PAO=0;PQA=0;PQR=0;PRO=0;QA=8682;QR=14419;RO=364;RPL=0;RPP=474.22;RPPR=793.426;RPR=217;RUN=1;SAF=217;SAP=474.22;SAR=0;SRF=364;SRP=793.426;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:52:38,14:38:1508:14:558:-34.9063,0,-120.316 0/1:103:86,17:86:3407:17:682:-30.7028,0,-275.69 0/1:62:50,12:50:2006:12:489:-25.6975,0,-162.07 0/1:101:77,24:77:3070:24:967:-56.924,0,-245.993 0/1:115:72,43:72:2806:43:1736:-121.836,0,-218.056 0/1:148:41,107:41:1622:107:4250:-337.914,0,-101.663 dDocent_Contig_9147 9 . A G 1808.8 . AB=0.123705;ABP=1901.99;AC=2;AF=0.166667;AN=12;AO=246;CIGAR=1X;DP=3859;DPB=3859;DPRA=0;EPP=537.193;EPPR=7844.2;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998338;PAO=0;PQA=0;PQR=0;PRO=0;QA=9273;QR=136945;RO=3611;RPL=0;RPP=537.193;RPPR=7844.2;RPR=246;RUN=1;SAF=246;SAP=537.193;SAR=0;SRF=3611;SRP=7844.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:514:486,28:486:18403:28:1045:0,-60.3731,-1561.02 0/0:711:710,1:710:26921:1:39:0,-210.136,-2417.53 0/0:462:455,6:455:17280:6:233:0,-117.584,-1533.08 0/0:628:608,20:608:23110:20:751:0,-121.131,-2010.75 0/1:671:572,99:572:21689:99:3724:-133.291,0,-1748.89 0/1:873:780,92:780:29542:92:3481:-50.811,0,-2394.52 dDocent_Contig_9148 16 . G A 34441.1 . AB=0.780753;ABP=949.181;AC=6;AF=0.5;AN=12;AO=1079;CIGAR=1X;DP=1382;DPB=1382;DPRA=0;EPP=2346.03;EPPR=660.966;GTI=0;LEN=1;MEANALT=1;MQM=59.7461;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.31696;PAIREDR=0.650165;PAO=0;PQA=0;PQR=0;PRO=0;QA=43127;QR=12083;RO=303;RPL=0;RPP=2346.03;RPPR=660.966;RPR=1079;RUN=1;SAF=1079;SAP=2346.03;SAR=0;SRF=303;SRP=660.966;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:155:15,140:15:604:140:5541:-449.358,0,-8.03866 0/1:261:55,206:55:2192:206:8225:-661.225,0,-118.887 0/1:170:43,127:43:1712:127:5066:-404.609,0,-103.13 0/1:293:81,212:81:3234:212:8467:-670.509,0,-202.927 0/1:304:58,246:58:2298:246:9902:-798.945,0,-115.47 0/1:199:51,148:51:2043:148:5926:-470.69,0,-124.154 dDocent_Contig_9149 46 . T C 36.6851 . AB=0.1;ABP=141.985;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=315;DPB=315;DPRA=1.00637;EPP=29.068;EPPR=660.966;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=478;QR=12025;RO=303;RPL=0;RPP=29.068;RPPR=660.966;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=303;SRP=660.966;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:43:39,4:39:1576:4:153:-1.19435,0,-129.128 0/1:57:51,6:51:2011:6:244:-5.18012,0,-164.023 0/0:58:56,2:56:2240:2:81:0,-9.77401,-194.08 0/0:59:59,0:59:2340:0:0:0,-17.7608,-210.755 0/0:55:55,0:55:2169:0:0:0,-16.5566,-195.382 0/0:43:43,0:43:1689:0:0:0,-12.9443,-152.236 dDocent_Contig_9150 16 . G A 1111.41 . AB=0.237443;ABP=134.141;AC=6;AF=0.5;AN=12;AO=52;CIGAR=1X;DP=219;DPB=219;DPRA=0;EPP=115.927;EPPR=365.646;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.461538;PAIREDR=0.57485;PAO=0;PQA=0;PQR=0;PRO=0;QA=2068;QR=6690;RO=167;RPL=0;RPP=115.927;RPPR=365.646;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=167;SRP=365.646;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:19,3:19:769:3:121:-4.65754,0,-62.9075 0/1:45:36,9:36:1417:9:344:-17.7593,0,-114.234 0/1:36:24,12:24:978:12:479:-32.6232,0,-77.478 0/1:41:32,9:32:1263:9:365:-20.8723,0,-101.596 0/1:36:23,13:23:931:13:523:-36.5799,0,-73.2547 0/1:39:33,6:33:1332:6:236:-9.87088,0,-108.397 dDocent_Contig_9151 30 . A T 36.7773 . AB=0.133333;ABP=38.0434;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=202;DPB=202;DPRA=0.927536;EPP=13.8677;EPPR=430.79;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=194;QR=7690;RO=197;RPL=0;RPP=13.8677;RPPR=430.79;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=197;SRP=430.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:37,0:37:1444:0:0:0,-11.1381,-130.228 0/0:34:33,1:33:1290:1:40:0,-6.23934,-112.381 0/0:37:37,0:37:1440:0:0:0,-11.1381,-129.868 0/1:30:26,4:26:996:4:154:-5.20052,0,-80.9112 0/0:39:39,0:39:1541:0:0:0,-11.7402,-138.945 0/0:25:25,0:25:979:0:0:0,-7.52575,-88.4171 dDocent_Contig_9152 42 . A C 737.428 . AB=0.248175;ABP=78.4729;AC=4;AF=0.333333;AN=12;AO=34;CIGAR=1X;DP=216;DPB=216;DPRA=0.867089;EPP=76.8404;EPPR=398.218;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1336;QR=7095;RO=182;RPL=0;RPP=76.8404;RPPR=398.218;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=182;SRP=398.218;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:14,9:14:556:9:366:-26.3815,0,-43.4571 0/0:28:28,0:28:1117:0:0:0,-8.42884,-100.815 0/0:51:51,0:51:1973:0:0:0,-15.3525,-177.753 0/1:28:24,4:24:934:4:139:-4.41605,0,-75.9317 0/1:32:29,3:29:1145:3:119:-1.46154,0,-93.6956 0/1:54:36,18:36:1370:18:712:-48.1464,0,-107.303 dDocent_Contig_9156 13 . A T 252.031 . AB=0.148148;ABP=148.177;AC=4;AF=0.333333;AN=12;AO=22;CIGAR=1X;DP=188;DPB=188;DPRA=1.19259;EPP=50.7827;EPPR=363.475;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.681818;PAIREDR=0.548193;PAO=0;PQA=0;PQR=0;PRO=0;QA=876;QR=6430;RO=166;RPL=0;RPP=50.7827;RPPR=363.475;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=166;SRP=363.475;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:23,5:23:876:5:196:-9.58498,0,-70.7196 0/0:27:27,0:27:1044:0:0:0,-8.12781,-94.2579 0/0:26:24,2:24:944:2:81:0,-0.141046,-77.5821 0/1:42:35,7:35:1336:7:277:-12.6557,0,-107.868 0/1:35:31,4:31:1204:4:159:-4.1557,0,-98.1058 0/1:30:26,4:26:1026:4:163:-6.02753,0,-83.6103 dDocent_Contig_9159 35 . A T 351.713 . AB=0.181818;ABP=99.7395;AC=3;AF=0.25;AN=12;AO=23;CIGAR=2X;DP=184;DPB=184;DPRA=2.12857;EPP=52.9542;EPPR=328.731;GTI=0;LEN=1;MEANALT=2.25;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.347826;PAIREDR=0.993333;PAO=0;PQA=0;PQR=0;PRO=0;QA=906;QR=5829;RO=150;RPL=0;RPP=52.9542;RPPR=328.731;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=150;SRP=328.731;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:39:33,3,3:33:1291:3,3:115,112:0,-0.491127,-105.736,-0.76912,-97.4702,-106.004 0|1:63:50,8,5:50:1894:8,5:316,200:-10.9477,0,-152.823,-9.52353,-138.756,-163.255 0|1:19:12,5,1:12:477:5,1:202,41:-13.0362,0,-37.7562,-13.2638,-35.8764,-52.2297 0|1:28:20,7,1:20:784:7,1:273,40:-16.4089,0,-62.3536,-19.1332,-61.1653,-83.302 0|0:24:24,0,0:24:940:0,0:0,0:0,-7.22472,-84.8932,-7.22472,-84.8932,-84.8932 0|0:11:11,0,0:11:443:0,0:0,0:0,-3.31133,-40.2261,-3.31133,-40.2261,-40.2261 dDocent_Contig_9160 16 . A G 1942.87 . AB=0.215909;ABP=311.458;AC=5;AF=0.416667;AN=12;AO=98;CIGAR=1X;DP=520;DPB=520;DPRA=0;EPP=215.815;EPPR=919.372;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.928571;PAIREDR=0.933649;PAO=0;PQA=0;PQR=0;PRO=0;QA=3832;QR=16380;RO=422;RPL=0;RPP=215.815;RPPR=919.372;RPR=98;RUN=1;SAF=98;SAP=215.815;SAR=0;SRF=422;SRP=919.372;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:80:77,3:77:2999:3:117:0,-13.1722,-259.12 0/1:98:84,14:84:3263:14:535:-18.9854,0,-264.267 0/1:74:64,10:64:2498:10:397:-13.8115,0,-202.712 0/1:79:67,12:67:2579:12:472:-19.0458,0,-208.492 0/1:70:61,9:61:2393:9:349:-10.6947,0,-194.474 0/1:119:69,50:69:2648:50:1962:-140.971,0,-202.666 dDocent_Contig_9161 32 . C T 1291.5 . AB=0.195266;ABP=275.639;AC=3;AF=0.25;AN=12;AO=87;CIGAR=1X;DP=1425;DPB=1425;DPRA=0.675743;EPP=191.928;EPPR=2908.44;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8924;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.986547;PAO=0;PQA=0;PQR=0;PRO=0;QA=3441;QR=53472;RO=1338;RPL=0;RPP=191.928;RPPR=2908.44;RPR=87;RUN=1;SAF=87;SAP=191.928;SAR=0;SRF=1338;SRP=2908.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:59,0:59:2379:0:0:0,-17.7608,-213.829 0/1:104:95,9:95:3834:9:359:-1.36519,0,-313.74 0/1:112:81,31:81:3245:31:1208:-75.2754,0,-256.514 0/1:122:96,26:96:3844:26:1039:-57.0803,0,-308.531 0/0:547:547,0:547:21772:0:0:0,-164.663,-1957.62 0/0:481:460,21:460:18398:21:835:0,-69.3317,-1578.82 dDocent_Contig_9162 31 . G A 119.997 . AB=0.12069;ABP=147.975;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=281;DPB=281;DPRA=1.38136;EPP=39.9253;EPPR=576.279;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.705882;PAIREDR=0.731061;PAO=0;PQA=0;PQR=0;PRO=0;QA=671;QR=10462;RO=264;RPL=0;RPP=39.9253;RPPR=576.279;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=264;SRP=576.279;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:31,0:31:1239:0:0:0,-9.33193,-111.78 0/0:47:47,0:47:1841:0:0:0,-14.1484,-165.904 0/0:47:44,3:44:1736:3:122:0,-2.77592,-145.082 0/0:40:40,0:40:1568:0:0:0,-12.0412,-141.352 0/1:66:59,7:59:2357:7:268:-4.61072,0,-192.419 0/1:50:43,7:43:1721:7:281:-10.6107,0,-140.061 dDocent_Contig_9163 63 . A G 288.929 . AB=0.166667;ABP=113.032;AC=3;AF=0.25;AN=12;AO=25;CIGAR=1X;DP=217;DPB=217;DPRA=2.9;EPP=57.2971;EPPR=419.933;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.92;PAIREDR=0.859375;PAO=0;PQA=0;PQR=0;PRO=0;QA=974;QR=7484;RO=192;RPL=25;RPP=57.2971;RPPR=419.933;RPR=0;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=192;SRP=419.933;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:30,6:30:1147:6:229:-10.1386,0,-92.6674 0/0:57:53,4:53:2073:4:144:0,-3.84784,-173.452 0/1:35:30,5:30:1169:5:202:-8.02582,0,-94.9495 0/1:43:35,8:35:1365:8:317:-15.9503,0,-110.168 0/0:14:14,0:14:535:0:0:0,-4.21442,-48.4876 0/0:32:30,2:30:1195:2:82:0,-1.85328,-100.05 dDocent_Contig_9164 32 . G T 1578.42 . AB=0.335165;ABP=45.9625;AC=4;AF=0.333333;AN=12;AO=93;CIGAR=1X;DP=600;DPB=600;DPRA=0;EPP=204.957;EPPR=1069.48;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.984221;PAO=0;PQA=0;PQR=0;PRO=0;QA=3655;QR=20017;RO=507;RPL=0;RPP=204.957;RPPR=1103.95;RPR=93;RUN=1;SAF=93;SAP=204.957;SAR=0;SRF=503;SRP=1069.48;SRR=4;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:3,28:3:122:28:1115:-91.3012,0,-2.04056 0/1:25:22,3:22:861:3:102:-1.98407,0,-70.2754 0/1:82:57,25:57:2268:25:1009:-66.4189,0,-179.601 0/1:44:39,5:39:1514:5:201:-5.22557,0,-123.245 0/0:186:174,12:174:6869:12:457:0,-14.5224,-576.449 0/0:232:212,20:212:8383:20:771:0,-0.141402,-684.322 dDocent_Contig_9165 14 . C T 7082.94 . AB=0.144398;ABP=1326.53;AC=3;AF=0.25;AN=12;AO=174;CIGAR=1X4M;DP=1388;DPB=1388;DPRA=0;EPP=380.846;EPPR=1829.22;GTI=0;LEN=1;MEANALT=4.2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=2.22045e-16;PAIRED=1;PAIREDR=0.998811;PAO=0;PQA=0;PQR=0;PRO=0;QA=6977;QR=33298;RO=841;RPL=0;RPP=380.846;RPPR=1829.22;RPR=174;RUN=1;SAF=174;SAP=380.846;SAR=0;SRF=841;SRP=1829.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:246:111,36,19,79:111:4415:36,19,79:1416,741,3142:-225.265,-142.207,-494.875,-197.786,-444.818,-555.571,0,-247.035,-302.615,-339.726 0|1:339:219,16,65,35:219:8680:16,65,35:647,2619,1411:-149.937,-162.518,-872.13,0,-661.085,-694.863,-99.5594,-760.644,-598.127,-803.452 0|1:118:47,28,22,20:47:1869:28,22,20:1126,887,801:-78.645,0,-145.448,-19.6832,-80.7656,-166.937,-26.8095,-87.8916,-107.575,-174.665 0|1:370:203,87,58,20:203:7994:87,58,20:3467,2325,815:-224.393,0,-631.401,-93.9621,-466.05,-734.094,-218.265,-590.353,-684.317,-869.836 0|0:183:164,0,0,15:164:6510:0,0,15:0,0,608:-0.766823,-50.1357,-586.035,-50.1357,-586.035,-586.035,0,-535.897,-535.897,-531.381 0|0:132:97,4,10,21:97:3830:4,10,21:160,405,832:-39.2722,-55.2918,-369.226,-35.075,-337.035,-347.205,0,-301.954,-281.739,-308.813 dDocent_Contig_9166 98 . N G 106.503 . AB=0;ABP=0;AC=4;AF=0.666667;AN=6;AO=3;CIGAR=1X;DP=4;DPB=4;DPRA=1.5;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=104;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 0/0:1:0,0:0:0:0:0:0,0,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_9167 18 . C T 6161.93 . AB=0.488318;ABP=3.51765;AC=4;AF=0.333333;AN=12;AO=209;CIGAR=1X;DP=821;DPB=821;DPRA=0.544529;EPP=456.848;EPPR=1327.61;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996721;PAO=0;PQA=0;PQR=0;PRO=0;QA=8351;QR=24469;RO=610;RPL=0;RPP=456.848;RPPR=1327.61;RPR=209;RUN=1;SAF=209;SAP=456.848;SAR=0;SRF=610;SRP=1327.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:120:42,77:42:1676:77:3081:-241.287,0,-114.982 0/1:70:21,48:21:857:48:1920:-151.829,0,-56.2679 0/1:99:64,35:64:2582:35:1378:-94.4736,0,-202.702 0/1:139:90,49:90:3597:49:1972:-135.825,0,-281.908 0/0:248:248,0:248:9931:0:0:0,-74.6554,-893.123 0/0:145:145,0:145:5826:0:0:0,-43.6493,-524.114 dDocent_Contig_9168 35 . A T 270.954 . AB=0.143791;ABP=171.633;AC=3;AF=0.25;AN=12;AO=27;CIGAR=1X1M1X1M1X;DP=287;DPB=287;DPRA=1.04783;EPP=61.6401;EPPR=565.422;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.851852;PAIREDR=0.799228;PAO=0;PQA=0;PQR=0;PRO=0;QA=1043;QR=10149;RO=259;RPL=0;RPP=61.6401;RPPR=565.422;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=259;SRP=565.422;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:26:22,4:22:847:4:140:-5.1106,0,-68.7162 0|0:46:46,0:46:1795:0:0:0,-13.8474,-161.782 0|0:42:38,3:38:1491:3:104:0,-3.03763,-124.738 0|0:46:44,2:44:1752:2:80:0,-6.25559,-150.317 0|1:47:40,7:40:1574:7:278:-11.2423,0,-127.761 0|1:80:69,11:69:2690:11:441:-15.9643,0,-218.168 dDocent_Contig_9169 15 . C G 294.503 . AB=0.171717;ABP=95.6817;AC=2;AF=0.166667;AN=12;AO=21;CIGAR=1X;DP=262;DPB=262;DPRA=0.988636;EPP=48.6112;EPPR=526.335;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.987552;PAO=0;PQA=0;PQR=0;PRO=0;QA=841;QR=9559;RO=241;RPL=0;RPP=48.6112;RPPR=526.335;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=241;SRP=526.335;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:30,2:30:1182:2:81:0,-1.94723,-98.9791 0/1:50:39,11:39:1529:11:443:-25.1744,0,-122.802 0/0:43:41,2:41:1604:2:74:0,-5.91852,-137.564 0/1:49:43,6:43:1708:6:243:-7.49771,0,-139.196 0/0:33:33,0:33:1330:0:0:0,-9.93399,-119.961 0/0:55:55,0:55:2206:0:0:0,-16.5566,-198.711 dDocent_Contig_9170 1 . N G 85.8762 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=12.2857;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=253;QR=0;RO=0;RPL=0;RPP=18.2106;RPPR=0;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:36:-1.29794,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:72:-2.27693,-0.60206,0 1/1:4:0,4:0:0:4:145:-4.5265,-1.20412,0 dDocent_Contig_9171 14 . T C 43163.3 . AB=0.688966;ABP=452.736;AC=7;AF=0.583333;AN=12;AO=1344;CIGAR=1X4M;DP=1862;DPB=1862;DPRA=0;EPP=2921.47;EPPR=584.965;GTI=0;LEN=1;MEANALT=5.5;MQM=59.401;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.30506;PAIREDR=0.768657;PAO=0;PQA=0;PQR=0;PRO=0;QA=53390;QR=10586;RO=268;RPL=0;RPP=2921.47;RPPR=584.965;RPR=1344;RUN=1;SAF=1344;SAP=2921.47;SAR=0;SRF=268;SRP=584.965;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:299:40,11,18,220:40:1547:11,18,220:255,712,8699:-702.993,-698.101,-821.839,-688.924,-799.04,-810.554,0,-110.196,-101.032,-60.8915 1|1:412:27,13,19,345:27:1068:13,19,345:288,752,13672:-1131.69,-1121.55,-1205.53,-1092.5,-1162.13,-1174.67,-15.917,-85.6219,-56.5404,0 0|1:243:25,8,18,192:25:995:8,18,192:204,707,7637:-619.64,-614.708,-694.225,-581.763,-651.231,-658.27,0,-69.5423,-36.5864,-24.1839 0|1:294:35,28,26,203:35:1395:28,26,203:668,1036,8068:-653.222,-622.324,-728.772,-598.588,-672.033,-705.64,0,-73.5248,-49.7529,-53.8201 0|1:271:59,20,28,158:59:2325:20,28,158:357,1122,6291:-499.407,-495.992,-681.245,-461.013,-631.111,-643.86,0,-170.192,-135.204,-143.792 0|1:343:82,20,11,226:82:3256:20,11,226:268,420,9023:-718.6,-730.184,-992.205,-721.142,-976.083,-985.876,0,-255.113,-246.049,-200.156 dDocent_Contig_9172 10 . A G 373.891 . AB=0.177966;ABP=109.302;AC=2;AF=0.166667;AN=12;AO=21;CIGAR=1X;DP=278;DPB=278;DPRA=1.475;EPP=48.6112;EPPR=561.079;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.904762;PAIREDR=0.918288;PAO=0;PQA=0;PQR=0;PRO=0;QA=838;QR=10203;RO=257;RPL=0;RPP=48.6112;RPPR=561.079;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=257;SRP=561.079;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:42:42,0:42:1663:0:0:0,-12.6433,-149.897 0/0:32:32,0:32:1278:0:0:0,-9.63296,-115.289 0/0:36:36,0:36:1439:0:0:0,-10.8371,-129.756 0/0:50:50,0:50:2003:0:0:0,-15.0515,-180.457 0/1:48:36,12:36:1409:12:481:-29.1919,0,-112.614 0/1:70:61,9:61:2411:9:357:-11.419,0,-196.061 dDocent_Contig_9173 60 . T A 576.158 . AB=0.354839;ABP=14.358;AC=1;AF=0.0833333;AN=12;AO=22;CIGAR=1X;DP=330;DPB=330;DPRA=1.15672;EPP=50.7827;EPPR=671.824;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.571429;PAO=0;PQA=0;PQR=0;PRO=0;QA=861;QR=12046;RO=308;RPL=11;RPP=3.0103;RPPR=6.42261;RPR=11;RUN=1;SAF=11;SAP=3.0103;SAR=11;SRF=165;SRP=6.42261;SRR=143;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1061:0:0:0,-8.12781,-95.7857 0/0:88:88,0:88:3372:0:0:0,-26.4906,-303.569 0/0:41:41,0:41:1624:0:0:0,-12.3422,-146.398 0/0:54:54,0:54:2101:0:0:0,-16.2556,-189.266 0/1:62:40,22:40:1561:22:861:-59.1387,0,-122.082 0/0:58:58,0:58:2327:0:0:0,-17.4597,-209.587 dDocent_Contig_9174 70 . A T 11674.3 . AB=0.593156;ABP=62.4822;AC=5;AF=0.416667;AN=12;AO=473;CIGAR=1X;DP=1039;DPB=1039;DPRA=0;EPP=1030.12;EPPR=1229.89;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.997886;PAIREDR=0.886726;PAO=0;PQA=0;PQR=0;PRO=0;QA=15877;QR=18676;RO=565;RPL=473;RPP=1030.12;RPPR=1229.89;RPR=0;RUN=1;SAF=473;SAP=1030.12;SAR=0;SRF=565;SRP=1229.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:128:66,62:66:2193:62:2119:-152.448,0,-159.108 0/1:232:76,156:76:2505:156:5201:-398.414,0,-155.873 0/1:117:40,77:40:1294:77:2656:-204.068,0,-81.5234 0/1:222:82,139:82:2725:139:4617:-348.8,0,-178.59 0/1:90:56,34:56:1848:34:1108:-72.9173,0,-139.503 0/0:250:245,5:245:8111:5:176:0,-59.0724,-713.897 dDocent_Contig_9175 12 . A G 157.342 . AB=0.216216;ABP=28.8919;AC=1;AF=0.1;AN=10;AO=8;CIGAR=1X;DP=219;DPB=219;DPRA=0.813187;EPP=20.3821;EPPR=461.191;GTI=0;LEN=1;MEANALT=1;MQM=49;MQMR=59.8626;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.976303;PAO=0;PQA=0;PQR=0;PRO=0;QA=326;QR=8211;RO=211;RPL=0;RPP=20.3821;RPPR=461.191;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=211;SRP=461.191;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:56:56,0:56:2200:0:0:0,-16.8577,-198.19 0/1:37:29,8:29:1155:8:326:-17.3362,0,-93.0115 0/0:65:65,0:65:2507:0:0:0,-19.5669,-225.708 0/0:35:35,0:35:1336:0:0:0,-10.536,-120.499 0/0:26:26,0:26:1013:0:0:0,-7.82678,-91.4699 ./.:.:.:.:.:.:.:. dDocent_Contig_9176 20 . C A 2803.4 . AB=0.305177;ABP=124.003;AC=5;AF=0.416667;AN=12;AO=121;CIGAR=1X;DP=484;DPB=484;DPRA=0;EPP=265.758;EPPR=791.255;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.950413;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4792;QR=14563;RO=363;RPL=0;RPP=265.758;RPPR=791.255;RPR=121;RUN=1;SAF=121;SAP=265.758;SAR=0;SRF=363;SRP=791.255;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:45:23,22:23:939:22:849:-63.169,0,-71.2629 0/1:100:75,25:75:3016:25:997:-59.9205,0,-241.414 0/1:52:28,24:28:1124:24:962:-71.2271,0,-85.7859 0/1:94:67,27:67:2701:27:1058:-67.202,0,-214.903 0/1:76:62,14:62:2451:14:562:-28.0435,0,-197.852 0/0:117:108,9:108:4332:9:364:0,-2.09575,-356.698 dDocent_Contig_9177 24 . G C 976.711 . AB=0.229167;ABP=125.337;AC=3;AF=0.25;AN=12;AO=44;CIGAR=1X;DP=262;DPB=262;DPRA=2.74286;EPP=98.5551;EPPR=476.391;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.995413;PAO=0;PQA=0;PQR=0;PRO=0;QA=1774;QR=8677;RO=218;RPL=0;RPP=98.5551;RPPR=476.391;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=218;SRP=476.391;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:891:0:0:0,-6.92369,-80.4968 0/1:91:60,31:60:2403:31:1243:-84.7458,0,-189.012 0/1:16:14,2:14:568:2:81:-2.86925,0,-46.6457 0/1:85:74,11:74:2907:11:450:-15.2682,0,-236.149 0/0:35:35,0:35:1418:0:0:0,-10.536,-127.866 0/0:12:12,0:12:490:0:0:0,-3.61236,-44.4511 dDocent_Contig_9178 42 . T G 343.679 . AB=0.191304;ABP=98.1963;AC=1;AF=0.1;AN=10;AO=22;CIGAR=1X;DP=841;DPB=841;DPRA=0.633609;EPP=50.7827;EPPR=1774.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.954545;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=781;QR=31318;RO=816;RPL=0;RPP=50.7827;RPPR=1774.93;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=816;SRP=1774.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:261:261,0:261:10060:0:0:0,-78.5688,-904.885 0/0:346:343,0:343:13188:0:0:0,-103.253,-1185.84 0/1:115:93,22:93:3582:22:781:-35.97,0,-287.82 0/0:56:56,0:56:2146:0:0:0,-16.8577,-193.337 ./.:.:.:.:.:.:.:. 0/0:63:63,0:63:2342:0:0:0,-18.9649,-210.945 dDocent_Contig_9179 18 . A G 377.508 . AB=0.705882;ABP=9.26925;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=98;DPB=98;DPRA=1.04938;EPP=29.068;EPPR=189.757;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=486;QR=3432;RO=86;RPL=0;RPP=29.068;RPPR=189.757;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=86;SRP=189.757;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:17:5,12:5:204:12:486:-38.9726,0,-13.6265 0/0:25:25,0:25:992:0:0:0,-7.52575,-89.5767 0/0:5:5,0:5:202:0:0:0,-1.50515,-18.5615 0/0:22:22,0:22:859:0:0:0,-6.62266,-77.6076 0/0:16:16,0:16:648:0:0:0,-4.81648,-58.6526 0/0:13:13,0:13:527:0:0:0,-3.91339,-47.7766 dDocent_Contig_9182 9 . A T 82.8722 . AB=0.25;ABP=11.6962;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=213;DPB=213;DPRA=0.505882;EPP=16.0391;EPPR=452.505;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=232;QR=7897;RO=207;RPL=0;RPP=16.0391;RPPR=452.505;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=207;SRP=452.505;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:12,4:12:462:4:155:-9.50896,0,-37.1142 0/0:27:25,2:25:954:2:77:0,-0.818668,-78.8651 0/0:36:36,0:36:1373:0:0:0,-10.8371,-123.854 0/0:40:40,0:40:1511:0:0:0,-12.0412,-136.267 0/0:48:48,0:48:1834:0:0:0,-14.4494,-165.313 0/0:46:46,0:46:1763:0:0:0,-13.8474,-158.926 dDocent_Contig_9183 171 . C T 65.8698 . AB=0.277778;ABP=10.7311;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=75;DPB=75;DPRA=0.923077;EPP=16.0391;EPPR=152.842;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.942029;PAO=0;PQA=0;PQR=0;PRO=0;QA=199;QR=2502;RO=69;RPL=6;RPP=16.0391;RPPR=152.842;RPR=0;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=152.842;SRR=69;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:8:5,3:5:178:3:99:-6.82869,0,-13.9594 0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7903 0/0:18:17,1:17:620:1:37:0,-1.72071,-52.4362 0/1:10:8,2:8:296:2:63:-2.97247,0,-23.9839 0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6961 0/0:19:19,0:19:688:0:0:0,-5.71957,-62.249 dDocent_Contig_9184 32 . C T 227.827 . AB=0.322581;ABP=11.486;AC=3;AF=0.25;AN=12;AO=10;CIGAR=1X;DP=49;DPB=49;DPRA=1.72222;EPP=24.725;EPPR=87.6977;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=398;QR=1579;RO=39;RPL=0;RPP=24.725;RPPR=87.6977;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=39;SRP=87.6977;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:5:5,0:5:199:0:0:0,-1.50515,-18.2886 0/0:6:6,0:6:245:0:0:0,-1.80618,-22.4295 0/1:12:5,7:5:205:7:276:-21.5961,0,-15.2226 0/0:7:7,0:7:282:0:0:0,-2.10721,-25.7521 0/1:11:9,2:9:367:2:81:-4.3744,0,-30.0839 0/1:8:7,1:7:281:1:41:-1.68633,0,-23.2528 dDocent_Contig_9185 38 . T G 410.46 . AB=0.764706;ABP=13.3567;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=468;DPB=468;DPRA=0.769231;EPP=39.9253;EPPR=980.173;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=688;QR=18015;RO=450;RPL=0;RPP=39.9253;RPPR=980.173;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=450;SRP=980.173;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:101:101,0:101:4024:0:0:0,-30.404,-362.137 0/0:126:126,0:126:5034:0:0:0,-37.9298,-452.941 0/0:113:108,4:108:4349:4:162:0,-19.149,-376.383 0/0:104:104,0:104:4172:0:0:0,-31.3071,-375.446 0/1:17:4,13:4:149:13:526:-42.5689,0,-8.65074 0/0:7:7,0:7:287:0:0:0,-2.10721,-26.2052 dDocent_Contig_9186 9 . A C 2037.64 . AB=0.16125;ABP=800.386;AC=3;AF=0.25;AN=12;AO=166;CIGAR=1X;DP=1424;DPB=1424;DPRA=0;EPP=363.475;EPPR=2732.55;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.987952;PAIREDR=0.998409;PAO=0;PQA=0;PQR=0;PRO=0;QA=6399;QR=48259;RO=1257;RPL=0;RPP=363.475;RPPR=2732.55;RPR=166;RUN=1;SAF=166;SAP=363.475;SAR=0;SRF=1257;SRP=2732.55;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:161:149,12:149:5717:12:457:0,-6.98677,-473.011 0/1:213:160,52:160:6110:52:2008:-116.943,0,-485.829 0/0:192:180,12:180:6914:12:459:0,-16.1379,-580.477 0/0:271:258,13:258:9926:13:495:0,-36.6848,-848.099 0/1:263:224,39:224:8571:39:1512:-57.1808,0,-691.988 0/1:324:286,38:286:11021:38:1468:-34.8625,0,-893.92 dDocent_Contig_9187 15 . C T 54.7272 . AB=0.138889;ABP=43.7857;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=343;DPB=343;DPRA=0.882353;EPP=20.3821;EPPR=728.282;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994012;PAO=0;PQA=0;PQR=0;PRO=0;QA=311;QR=13316;RO=334;RPL=0;RPP=20.3821;RPPR=728.282;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=334;SRP=728.282;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1385:0:0:0,-10.536,-124.901 0/0:51:51,0:51:2016:0:0:0,-15.3525,-181.634 0/0:67:66,0:66:2633:0:0:0,-19.868,-236.772 0/1:36:31,5:31:1253:5:194:-6.9956,0,-102.202 0/0:69:66,3:66:2625:3:117:0,-9.86069,-225.456 0/0:85:85,0:85:3404:0:0:0,-25.5875,-306.392 dDocent_Contig_9188 57 . A C 409.158 . AB=0.246575;ABP=43.7328;AC=3;AF=0.25;AN=12;AO=18;CIGAR=1X3M1X;DP=106;DPB=106;DPRA=3.47619;EPP=42.0968;EPPR=187.585;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=705;QR=3298;RO=85;RPL=18;RPP=42.0968;RPPR=187.585;RPR=0;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=85;SRP=187.585;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:30:24,6,0:24:951:6,0:239,0:-12.8543,0,-76.868,-20.079,-78.6741,-98.3556 0|0:10:10,0,0:10:386:0,0:0,0:0,-3.0103,-35.094,-3.0103,-35.094,-35.094 0|1:7:6,1,0:6:236:1,0:40,0:-1.88847,0,-19.5052,-3.69465,-19.8063,-23.1023 0|1:36:25,11,0:25:964:11,0:426,0:-27.8551,0,-76.2319,-35.3809,-79.5433,-114.538 0|0:4:4,0,0:4:157:0,0:0,0:0,-1.20412,-14.5088,-1.20412,-14.5088,-14.5088 0|0:19:16,0,3:16:604:0,3:0,119:-5.37544,-10.1919,-59.6741,0,-49.8754,-48.9724 dDocent_Contig_9190 65 . T G 3807.9 . AB=0.0738916;ABP=323.158;AC=0;AF=0;AN=12;AO=15;CIGAR=1X3M1X;DP=418;DPB=418;DPRA=0.835391;EPP=35.5824;EPPR=548.05;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=0.933333;PAIREDR=0.760956;PAO=0;PQA=0;PQR=0;PRO=0;QA=540;QR=8931;RO=251;RPL=7;RPP=3.15506;RPPR=8.41735;RPR=8;RUN=1;SAF=7;SAP=3.15506;SAR=8;SRF=138;SRP=8.41735;SRR=113;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:63:26,0,37:26:898:0,37:0,1386:-106.053,-113.88,-186.823,0,-73.3002,-62.1621 0|0:76:43,1,32:43:1548:1,32:34,1199:-85.2689,-95.4562,-221.448,0,-123.563,-116.688 0|0:29:9,8,12:9:321:8,12:290,460:-35.0551,-14.0954,-37.8423,0,-2.48352,-22.5511 0|0:71:37,0,34:37:1306:0,34:0,1244:-90.8686,-102.007,-208.343,0,-106.696,-96.4611 0|0:81:74,0,7:74:2629:0,7:0,239:0,-22.2762,-236.495,-2.54579,-217.107,-215 0|0:98:62,6,30:62:2229:6,30:216,1117:-72.7658,-73.8084,-253.826,0,-164.209,-172.801 dDocent_Contig_9191 8 . T C 2486.15 . AB=0.241736;ABP=283.417;AC=6;AF=0.5;AN=12;AO=117;CIGAR=1X;DP=484;DPB=484;DPRA=0;EPP=257.073;EPPR=799.941;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.931624;PAIREDR=0.950954;PAO=0;PQA=0;PQR=0;PRO=0;QA=4484;QR=14045;RO=367;RPL=0;RPP=257.073;RPPR=799.941;RPR=117;RUN=1;SAF=117;SAP=257.073;SAR=0;SRF=367;SRP=799.941;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:24,10:24:936:10:389:-25.1334,0,-74.3204 0/1:90:58,32:58:2197:32:1206:-81.7346,0,-170.858 0/1:68:58,10:58:2236:10:389:-14.8983,0,-180.989 0/1:89:72,17:72:2752:17:657:-32.6749,0,-221.072 0/1:70:58,12:58:2234:12:466:-21.2199,0,-180.206 0/1:133:97,36:97:3690:36:1377:-84.1761,0,-292.18 dDocent_Contig_9192 91 . C T 666.077 . AB=0.774194;ABP=23.254;AC=1;AF=0.1;AN=10;AO=24;CIGAR=1X;DP=218;DPB=218;DPRA=0.663102;EPP=55.1256;EPPR=424.276;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.989691;PAO=0;PQA=0;PQR=0;PRO=0;QA=858;QR=6857;RO=194;RPL=24;RPP=55.1256;RPPR=424.276;RPR=0;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=194;SRP=424.276;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1167:0:0:0,-9.93399,-105.337 0/0:48:48,0:48:1696:0:0:0,-14.4494,-152.926 0/0:10:10,0:10:355:0:0:0,-3.0103,-32.2908 0/0:96:96,0:96:3387:0:0:0,-28.8989,-305.048 ./.:.:.:.:.:.:.:. 0/1:31:7,24:7:252:24:858:-68.2098,0,-13.697 dDocent_Contig_9193 13 . A G 960.96 . AB=0.0509554;ABP=277.985;AC=0;AF=0;AN=12;AO=8;CIGAR=2X1M2X6M;DP=382;DPB=401.364;DPRA=0;EPP=20.3821;EPPR=660.966;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.9967;PAO=0;PQA=0;PQR=0;PRO=0;QA=308;QR=11648;RO=303;RPL=0;RPP=20.3821;RPPR=660.966;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=303;SRP=660.966;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:47:38,6,3,0:38:1463:6,3,0:242,113,0:-8.52679,0,-118.323,-10.7152,-110.87,-129.918,-19.9659,-120.129,-130.821,-140.08 0|0:68:50,18,0,0:50:1911:18,0,0:718,0,0:-44.4788,0,-151.763,-59.5303,-157.182,-216.318,-59.5303,-157.182,-216.318,-216.318 0|0:84:69,6,0,8:69:2670:6,0,8:240,0,287:-2.60808,-3.59405,-221.128,-23.3792,-222.934,-242.705,0,-199.536,-219.307,-216.899 0|0:83:66,12,3,0:66:2558:12,3,0:480,115,0:-19.6803,0,-206.541,-30.1127,-200.715,-239.353,-39.5483,-210.153,-240.256,-249.695 0|0:27:14,10,2,0:14:523:10,2,0:399,80,0:-28.6789,0,-39.8212,-26.3012,-36.2374,-68.509,-32.8933,-42.8315,-69.1111,-75.7028 0|0:73:66,7,0,0:66:2523:7,0,0:277,0,0:-3.32423,0,-205.292,-23.1922,-207.399,-230.197,-23.1922,-207.399,-230.197,-230.197 dDocent_Contig_9194 19 . T C 6599.72 . AB=0.0900474;ABP=619.029;AC=0;AF=0;AN=12;AO=38;CIGAR=1M1I10M1X;DP=838;DPB=863.25;DPRA=0;EPP=85.5263;EPPR=919.372;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1428;QR=16531;RO=422;RPL=0;RPP=85.5263;RPPR=919.372;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=422;SRP=919.372;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:91:37,13,10,29,2:37:1453:13,10,29,2:482,381,1093,77:-78.4279,-50.133,-165.732,-58.3116,-138.393,-174.815,0,-80.0846,-88.2629,-110.785,-83.2433,-163.323,-171.502,-113.193,-202.153 0|0:104:43,17,7,32,4:43:1707:17,7,32,4:635,257,1216,155:-86.7822,-47.7388,-183.158,-78.7213,-167.27,-217.15,0,-88.5558,-119.536,-130.908,-86.9917,-175.541,-206.523,-127.807,-226.324 0|0:73:42,7,0,22,2:42:1645:7,0,22,2:272,0,842,77:-56.4503,-46.7405,-179.904,-69.0935,-182.011,-204.363,0,-112.917,-135.269,-128.646,-62.7711,-175.689,-198.041,-128.946,-197.439 0|0:154:72,1,5,55,21:72:2833:1,5,55,21:39,189,2071,793:-148.018,-166.486,-399.24,-154.2,-384.048,-385.749,0,-229.852,-217.566,-216.501,-104.697,-334.547,-322.26,-168.066,-331.431 0|0:170:106,0,18,46,0:106:4135:0,18,46,0:0,690,1748,0:-111.439,-143.348,-483.24,-86.7148,-426.608,-421.19,0,-339.892,-283.261,-326.045,-143.348,-483.24,-426.608,-339.892,-483.24 0|0:246:122,0,37,72,13:122:4758:0,37,72,13:0,1390,2763,491:-190.076,-226.802,-617.891,-112.934,-504.023,-492.885,0,-391.096,-277.228,-369.422,-186.559,-577.649,-463.781,-350.854,-573.735 dDocent_Contig_9195 209 . N G 112.805 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=121;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:121:-11.28,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_9197 81 . G A 1514.13 . AB=0.47482;ABP=3.77578;AC=6;AF=0.5;AN=12;AO=66;CIGAR=1X;DP=139;DPB=139;DPRA=0;EPP=146.327;EPPR=161.528;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2250;QR=2506;RO=73;RPL=66;RPP=146.327;RPPR=161.528;RPR=0;RUN=1;SAF=66;SAP=146.327;SAR=0;SRF=73;SRP=161.528;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:17:9,8:9:310:8:273:-19.7852,0,-23.1167 0/1:23:9,14:9:298:14:471:-35.7881,0,-20.2185 0/1:16:7,9:7:244:9:314:-23.7814,0,-17.4836 0/1:23:9,14:9:312:14:483:-36.8755,0,-21.4925 0/1:24:20,4:20:688:4:137:-5.44334,0,-55.0168 0/1:36:19,17:19:654:17:572:-40.9608,0,-48.3454 dDocent_Contig_9198 16 . G A 10274.4 . AB=0.0763023;ABP=2128.32;AC=4;AF=0.333334;AN=12;AO=104;CIGAR=7M1X7M;DP=1363;DPB=1365.53;DPRA=0;EPP=228.843;EPPR=821.655;GTI=0;LEN=1;MEANALT=12.6667;MQM=60;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=1;PAIREDR=0.997347;PAO=0;PQA=0;PQR=0;PRO=0;QA=4150;QR=14695;RO=377;RPL=0;RPP=228.843;RPPR=821.655;RPR=104;RUN=1;SAF=104;SAP=228.843;SAR=0;SRF=377;SRP=821.655;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:134:49,15,13,20,1,4,7,0,15,5:49:1911:15,13,20,1,4,7,0,15,5:583,496,776,37,126,270,0,578,197:-49.0038,-15.8469,-168.412,-23.0693,-132.243,-176.236,0,-109.175,-116.397,-151.061,-60.7274,-169.901,-177.123,-154.054,-217.506,-53.656,-162.829,-170.05,-146.982,-207.708,-209.531,-41.5813,-150.755,-157.977,-134.909,-195.635,-188.562,-196.554,-63.7543,-172.928,-180.15,-157.081,-217.807,-210.735,-198.662,-220.834,-16.3057,-125.48,-132.702,-109.633,-170.359,-163.287,-151.214,-173.386,-168.871,-47.549,-156.723,-163.945,-140.876,-201.602,-194.53,-182.457,-204.629,-157.181,-203.124 0|0:224:95,41,31,8,2,2,19,0,11,10:95:3693:41,31,8,2,2,19,0,11,10:1622,1153,295,80,74,654,0,448,349:-104.901,0,-291.128,-39.148,-209.119,-333.281,-109.378,-279.35,-318.492,-410.435,-126.908,-296.88,-336.022,-406.252,-429.771,-127.445,-297.416,-336.559,-406.789,-424.319,-430.307,-80.3958,-250.366,-289.508,-359.738,-377.268,-377.804,-378.139,-133.499,-303.47,-342.613,-412.843,-430.373,-430.91,-383.858,-436.963,-96.5381,-266.51,-305.653,-375.884,-393.414,-393.95,-346.899,-400.004,-396.693,-105.132,-275.102,-314.245,-384.475,-402.005,-402.541,-355.49,-408.595,-371.636,-405.585 0|0:296:90,54,27,24,5,4,8,20,23,31:90:3528:54,27,24,5,4,8,20,23,31:2108,985,924,192,106,304,790,920,1246:-146.198,0,-273.867,-92.8415,-209.674,-374.834,-97.435,-214.268,-307.107,-380.332,-157.532,-274.365,-367.204,-371.799,-446.149,-165.18,-282.012,-374.852,-379.446,-439.543,-454.097,-148.361,-265.193,-358.033,-362.627,-422.724,-430.371,-436.074,-108.285,-225.117,-317.957,-322.551,-382.648,-390.296,-373.477,-392.386,-97.5102,-214.343,-307.183,-311.777,-371.874,-379.522,-362.703,-322.627,-380.709,-70.6104,-187.444,-280.284,-284.878,-344.975,-352.622,-335.803,-295.728,-284.953,-351.401 0|1:237:100,26,28,45,0,2,2,7,8,3:100:3893:26,28,45,0,2,2,7,8,3:1010,1017,1718,0,77,78,265,327,113:-110.828,-57.9391,-370.06,-57.9,-294.855,-369.416,0,-236.958,-236.917,-306.402,-140.931,-377.887,-377.845,-319.948,-460.877,-134.608,-371.564,-371.523,-313.626,-454.554,-453.952,-134.519,-371.475,-371.433,-313.537,-454.465,-448.143,-453.863,-119.212,-356.168,-356.126,-298.23,-439.158,-432.836,-432.746,-437.051,-113.945,-350.902,-350.86,-292.964,-433.892,-427.57,-427.481,-412.174,-431.484,-131.673,-368.629,-368.587,-310.69,-451.618,-445.296,-445.207,-429.9,-424.634,-450.715 1|0:225:10,0,29,5,0,9,0,71,13,72:10:396:0,29,5,0,9,0,71,13,72:0,981,185,0,316,0,2823,513,2816:-428.321,-431.332,-463.926,-351.846,-384.44,-375.71,-416.201,-448.796,-369.31,-447.29,-431.332,-463.926,-384.44,-448.796,-463.926,-405.619,-438.213,-358.728,-423.083,-438.213,-435.504,-431.332,-463.926,-384.44,-448.796,-463.926,-438.213,-463.926,-198.901,-231.496,-152.013,-216.366,-231.496,-205.784,-231.496,-210.123,-389.122,-421.716,-342.231,-406.586,-421.716,-396.004,-421.716,-189.285,-417.803,-199.844,-232.439,-152.956,-217.309,-232.439,-206.727,-232.439,0,-190.228,-210.765 1|0:247:33,0,14,21,15,20,1,53,34,44:33:1274:0,14,21,15,20,1,53,34,44:0,518,812,551,677,40,2094,1364,1723:-199.408,-209.342,-313.966,-167.277,-271.901,-267.687,-142.654,-247.279,-205.214,-240.957,-164.433,-269.057,-226.992,-202.369,-264.542,-154.476,-259.1,-217.035,-192.412,-214.191,-253.079,-206.047,-310.671,-268.606,-243.983,-265.762,-255.805,-310.37,-37.0337,-141.659,-99.5939,-74.9706,-96.7498,-86.7931,-138.364,-125.704,-96.9576,-201.583,-159.518,-134.894,-156.673,-146.716,-198.287,-29.2736,-191.348,-67.6841,-172.309,-130.244,-105.621,-127.4,-117.443,-169.014,0,-59.9242,-159.064 dDocent_Contig_9199 32 . A G 214.008 . AB=0.7;ABP=6.48466;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=481;DPB=481;DPRA=0.106157;EPP=18.2106;EPPR=1030.12;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=284;QR=18006;RO=473;RPL=0;RPP=18.2106;RPPR=1030.12;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=473;SRP=1030.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:98:98,0:98:3669:0:0:0,-29.5009,-330.311 0/0:156:155,0:155:5922:0:0:0,-46.6596,-532.802 0/0:62:62,0:62:2411:0:0:0,-18.6639,-217.176 0/0:140:140,0:140:5340:0:0:0,-42.1442,-480.571 0/0:15:15,0:15:582:0:0:0,-4.51545,-52.7205 0/1:10:3,7:3:82:7:284:-22.9235,0,-4.63855 dDocent_Contig_9200 8 . G A 65.4521 . AB=0.12;ABP=34.3664;AC=3;AF=0.25;AN=12;AO=4;CIGAR=1X1M1X3M2X;DP=258;DPB=258;DPRA=0.415493;EPP=11.6962;EPPR=495.935;GTI=0;LEN=1;MEANALT=2;MQM=30;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.54185;PAO=0;PQA=0;PQR=0;PRO=0;QA=158;QR=8849;RO=227;RPL=0;RPP=11.6962;RPPR=495.935;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=227;SRP=495.935;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:25:20,5,0:20:765:5,0:170,0:-6.72991,0,-61.6481,-12.7505,-63.1532,-75.5794 0|0:60:54,6,0:54:2108:6,0:123,0:0,-8.42247,-180.294,-16.2556,-182.1,-189.736 0|1:25:20,2,3:20:782:2,3:34,118:-1.05495,-5.21234,-68.9873,0,-62.6177,-63.6158 0|0:34:31,2,1:31:1211:2,1:46,40:0,-6.40378,-105.444,-6.85432,-103.606,-106.291 0|1:32:24,8,0:24:943:8,0:160,0:-3.02232,0,-75.5489,-10.247,-77.9571,-87.976 0|0:82:78,4,0:78:3040:4,0:85,0:0,-17.9236,-266.977,-23.4803,-268.181,-273.545 dDocent_Contig_9201 17 . A G 541.478 . AB=0.181818;ABP=157.777;AC=5;AF=0.416667;AN=12;AO=32;CIGAR=1X;DP=208;DPB=208;DPRA=1.1;EPP=72.4974;EPPR=385.189;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0.801136;PAO=0;PQA=0;PQR=0;PRO=0;QA=1272;QR=6940;RO=176;RPL=0;RPP=72.4974;RPPR=385.189;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=176;SRP=385.189;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:20,8:20:791:8:320:-20.7385,0,-63.0787 0/1:48:43,5:43:1692:5:202:-4.11206,0,-138.052 0/1:37:32,5:32:1260:5:202:-7.42338,0,-102.534 0/0:32:32,0:32:1275:0:0:0,-9.63296,-115.012 0/1:31:27,4:27:1049:4:163:-5.7265,0,-85.3669 0/1:32:22,10:22:873:10:385:-25.3687,0,-69.2459 dDocent_Contig_9202 33 . C T 13798.4 . AB=0;ABP=0;AC=4;AF=0.333333;AN=12;AO=409;CIGAR=1X;DP=854;DPB=854;DPRA=1.45402;EPP=891.143;EPPR=969.316;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=16352;QR=17697;RO=445;RPL=0;RPP=891.143;RPPR=969.316;RPR=409;RUN=1;SAF=409;SAP=891.143;SAR=0;SRF=445;SRP=969.316;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:129:129,0:129:5044:0:0:0,-38.8329,-453.849 0/0:90:90,0:90:3615:0:0:0,-27.0927,-325.365 0/0:78:75,3:75:3006:3:123:0,-12.0156,-259.156 0/0:129:129,0:129:5144:0:0:0,-38.8329,-462.799 1/1:284:18,266:18:729:266:10628:-889.862,-19.5582,0 1/1:144:4,140:4:159:140:5601:-489.2,-28.6575,0 dDocent_Contig_9203 38 . C A 104.459 . AB=0.2;ABP=26.4622;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X2M1X;DP=169;DPB=169;DPRA=1.18868;EPP=20.3821;EPPR=335.301;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.625;PAIREDR=0.757962;PAO=0;PQA=0;PQR=0;PRO=0;QA=301;QR=6065;RO=157;RPL=0;RPP=20.3821;RPPR=343.931;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=156;SRP=335.301;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:30:24,6:24:946:6:226:-11.6678,0,-76.4158 0|0:24:23,0:23:900:0:0:0,-6.92369,-80.9134 0|0:14:14,0:14:523:0:0:0,-4.21442,-47.4028 0|0:33:30,2:30:1177:2:75:0,-2.91124,-99.0827 0|0:25:25,0:25:937:0:0:0,-7.52575,-84.6329 0|0:43:41,0:41:1582:0:0:0,-12.3422,-142.226 dDocent_Contig_9204 41 . A T 355.134 . AB=0.257576;ABP=36.701;AC=3;AF=0.25;AN=12;AO=17;CIGAR=1X;DP=142;DPB=142;DPRA=0.868421;EPP=39.9253;EPPR=274.444;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=661;QR=5019;RO=125;RPL=0;RPP=39.9253;RPPR=274.444;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=125;SRP=274.444;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:26,4:26:1057:4:161:-5.844,0,-86.3862 0/1:16:7,9:7:284:9:336:-25.762,0,-21.1169 0/0:29:29,0:29:1165:0:0:0,-8.72987,-105.125 0/1:20:16,4:16:647:4:164:-9.1293,0,-52.543 0/0:22:22,0:22:869:0:0:0,-6.62266,-78.5184 0/0:25:25,0:25:997:0:0:0,-7.52575,-90.02 dDocent_Contig_9206 1 . N G 68.354 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=72;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:72:-6.83432,-0.60206,0 dDocent_Contig_9207 9 . T C 8040.91 . AB=0.673797;ABP=101.133;AC=8;AF=0.666667;AN=12;AO=252;CIGAR=1X12M;DP=374;DPB=355.154;DPRA=0;EPP=550.221;EPPR=137.642;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9557;QR=2398;RO=62;RPL=0;RPP=550.221;RPPR=137.642;RPR=252;RUN=1;SAF=252;SAP=550.221;SAR=0;SRF=62;SRP=137.642;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:34:10,0,0,0,24:10:389:0,0,0,24:0,0,0,916:-72.5231,-75.5334,-107.503,-75.5334,-107.503,-107.503,-75.5334,-107.503,-107.503,-107.503,0,-32.3566,-32.3566,-32.3566,-25.1318 0|1:49:10,3,1,0,35:10:381:3,1,0,35:120,40,0,1324:-105.505,-98.6289,-128.977,-105.22,-126.585,-136.17,-108.516,-129.88,-136.471,-139.767,0,-21.3486,-27.9414,-31.2375,-20.7015 0|1:99:24,0,1,1,73:24:923:0,1,1,73:0,38,39,2755:-218.55,-225.775,-301.548,-222.658,-298.432,-298.131,-222.568,-298.342,-295.226,-298.041,0,-75.7718,-72.6555,-72.5657,-53.7966 0|1:63:10,3,0,4,45:10:391:3,0,4,45:115,0,157,1700:-136.313,-129.884,-161.131,-139.323,-162.034,-171.473,-126.41,-149.121,-158.56,-157.355,0,-22.7103,-32.1475,-19.2346,-18.6012 1|1:48:2,7,6,0,33:2:79:7,6,0,33:276,227,0,1265:-119.433,-97.3244,-101.719,-101.427,-85.2186,-106.123,-120.035,-103.826,-107.929,-126.536,-16.212,0,-4.11228,-22.7141,-12.7801 1|1:81:6,17,12,0,42:6:235:17,12,0,42:648,476,0,1597:-162.989,-111.642,-125.85,-125.608,-91.7801,-141.321,-164.795,-130.967,-144.933,-184.12,-33.8236,0,-13.9603,-53.1488,-40.5056 dDocent_Contig_9208 11 . G A 4707.56 . AB=0.272237;ABP=337.347;AC=6;AF=0.5;AN=12;AO=202;CIGAR=1X;DP=742;DPB=742;DPRA=0;EPP=441.648;EPPR=1171.26;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.9208;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.99505;PAIREDR=0.998141;PAO=0;PQA=0;PQR=0;PRO=0;QA=7817;QR=20865;RO=538;RPL=0;RPP=441.648;RPPR=1171.26;RPR=202;RUN=1;SAF=202;SAP=441.648;SAR=0;SRF=538;SRP=1171.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:97:66,31:66:2524:31:1155:-75.0302,0,-198.123 0/1:140:93,45:93:3591:45:1753:-116.056,0,-281.317 0/1:75:51,24:51:1999:24:939:-62.2384,0,-157.536 0/1:102:74,28:74:2881:28:1097:-68.3201,0,-228.714 0/1:182:145,37:145:5623:37:1448:-75.7962,0,-451.15 0/1:146:109,37:109:4247:37:1425:-84.5361,0,-338.28 dDocent_Contig_9209 13 . A G 315.879 . AB=0.134884;ABP=251.962;AC=1;AF=0.0833333;AN=12;AO=117;CIGAR=1X;DP=2191;DPB=2191;DPRA=0;EPP=257.073;EPPR=4506.64;GTI=0;LEN=1;MEANALT=1;MQM=56.3419;MQMR=59.4865;NS=6;NUMALT=1;ODDS=0;PAIRED=0.692308;PAIREDR=0.605111;PAO=0;PQA=0;PQR=0;PRO=0;QA=4380;QR=79164;RO=2074;RPL=0;RPP=257.073;RPPR=4506.64;RPR=117;RUN=1;SAF=117;SAP=257.073;SAR=0;SRF=2074;SRP=4506.64;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:371:346,25:346:13160:25:933:0,-27.8206,-1098.48 0/0:561:537,24:537:20466:24:904:0,-87.4556,-1758.61 0/0:365:351,14:351:13534:14:516:0,-63.1867,-1169.45 0/0:422:405,17:405:15434:17:638:0,-69.3385,-1328.32 0/0:257:249,8:249:9479:8:301:0,-50.0816,-823.121 0/1:215:186,29:186:7091:29:1088:-33.1108,0,-572.213 dDocent_Contig_9210 58 . G A 36.2231 . AB=0.114754;ABP=81.6461;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=481;DPB=481;DPRA=0.72619;EPP=18.2106;EPPR=1032.29;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8038;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.943038;PAO=0;PQA=0;PQR=0;PRO=0;QA=254;QR=18641;RO=474;RPL=7;RPP=18.2106;RPPR=1032.29;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=474;SRP=1032.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:61:54,7:54:2075:7:254:-4.84405,0,-168.576 0/0:93:93,0:93:3656:0:0:0,-27.9958,-329.033 0/0:43:43,0:43:1690:0:0:0,-12.9443,-152.307 0/0:60:60,0:60:2309:0:0:0,-18.0618,-207.934 0/0:107:107,0:107:4268:0:0:0,-32.2102,-383.574 0/0:117:117,0:117:4643:0:0:0,-35.2205,-417.799 dDocent_Contig_9212 35 . A G 294.115 . AB=0.161017;ABP=120.785;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1X;DP=328;DPB=328;DPRA=1.01852;EPP=52.9542;EPPR=665.309;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.608696;PAIREDR=0.701639;PAO=0;PQA=0;PQR=0;PRO=0;QA=908;QR=12098;RO=305;RPL=0;RPP=52.9542;RPPR=665.309;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=305;SRP=665.309;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:51:51,0:51:2022:0:0:0,-15.3525,-182.169 0/0:63:60,3:60:2392:3:120:0,-7.77758,-204.253 0/0:57:57,0:57:2242:0:0:0,-17.1587,-201.946 0/1:54:49,5:49:1964:5:203:-2.39723,0,-160.694 0/0:39:38,1:38:1479:1:39:0,-7.84361,-129.456 0/1:64:50,14:50:1999:14:546:-30.2081,0,-160.833 dDocent_Contig_9214 21 . G C 681.969 . AB=0.174107;ABP=209.649;AC=4;AF=0.333333;AN=12;AO=47;CIGAR=1X;DP=345;DPB=345;DPRA=0;EPP=105.07;EPPR=647.938;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.489362;PAIREDR=0.393939;PAO=0;PQA=0;PQR=0;PRO=0;QA=1879;QR=11806;RO=297;RPL=0;RPP=105.07;RPPR=647.938;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=297;SRP=647.938;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:37,3:37:1467:3:112:0,-1.59678,-121.833 0/1:43:34,9:34:1346:9:358:-19.6387,0,-108.454 0/1:29:26,3:26:1033:3:123:-2.73492,0,-84.5288 0/1:58:44,14:44:1750:14:569:-34.0923,0,-140.26 0/0:81:75,5:75:2983:5:196:0,-6.4775,-250.545 0/1:94:81,13:81:3227:13:521:-18.9397,0,-262.188 dDocent_Contig_9215 19 . G A 33337.4 . AB=0.099912;ABP=3161.89;AC=3;AF=0.25;AN=12;AO=227;CIGAR=3M1X4M2X1M1X7M1X;DP=2272;DPB=2249.9;DPRA=0;EPP=495.935;EPPR=257.073;GTI=0;LEN=1;MEANALT=27.8333;MQM=60;MQMR=60;NS=6;NUMALT=6;ODDS=0;PAIRED=0.986784;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8566;QR=4583;RO=117;RPL=0;RPP=495.935;RPPR=257.073;RPR=227;RUN=1;SAF=227;SAP=495.935;SAR=0;SRF=117;SRP=257.073;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:315:16,6,53,17,85,43,31:16:627:6,53,17,85,43,31:230,2010,666,3245,1592,1189:-374.634,-360.572,-410.326,-214.653,-247.335,-250.258,-324.684,-357.366,-211.447,-371.126,-113.237,-145.919,0,-110.031,-139.21,-249.215,-281.897,-135.978,-246.009,-34.5629,-287.831,-281.863,-314.545,-168.626,-278.657,-67.2102,-203.188,-324.091 0|0:394:30,23,39,42,142,30,11:30:1184:23,39,42,142,30,11:888,1447,1633,5544,1122,421:-483.488,-419.591,-510.092,-374.134,-398.631,-459.818,-358.327,-382.824,-337.366,-443.108,-36.7678,-61.2649,-15.8081,0,-91.4467,-400.645,-425.141,-379.684,-363.877,-42.3186,-489.038,-457.973,-482.469,-437.012,-421.205,-99.6464,-463.523,-552.086 0|0:307:15,23,20,29,96,23,35:15:587:23,20,29,96,23,35:878,749,1131,3680,854,1376:-362.401,-294.883,-336.225,-305.58,-281.812,-347.825,-273.953,-250.185,-260.882,-313.489,-64.9197,-41.1514,-51.8489,-20.2214,-84.2865,-297.033,-273.264,-283.961,-252.334,-43.3015,-338.374,-253.732,-229.964,-240.661,-209.034,0,-232.113,-291.462 1|0:312:7,14,45,31,120,12,22:7:270:14,45,31,120,12,22:528,1695,1208,4632,457,849:-494.984,-453.824,-471.78,-358.208,-337.112,-366.833,-397.805,-376.708,-281.093,-410.644,-116.711,-95.6154,0,-39.5952,-102.759,-459.604,-438.508,-342.893,-382.489,-101.396,-478.163,-427.371,-406.274,-310.659,-350.255,-69.1617,-412.055,-442.919 0|0:526:31,0,41,36,253,24,66:31:1215:0,41,36,253,24,66:0,1559,1386,9774,880,2563:-904.052,-913.384,-1013.3,-785.533,-885.448,-873.106,-799.592,-899.508,-771.656,-888.671,-110.68,-210.596,-82.7442,-96.8033,-134.435,-841.461,-941.376,-813.525,-827.585,-138.673,-934.152,-702.79,-802.706,-674.854,-688.914,0,-730.782,-782.838 1|0:418:18,0,29,15,221,15,28:18:700:0,29,15,221,15,28:0,1106,600,8498,558,1080:-725.398,-730.817,-788.341,-640.091,-697.616,-688.886,-681.39,-738.914,-648.189,-734.399,-33.2009,-90.7259,0,-41.298,-24.1983,-685.149,-742.674,-651.948,-693.247,-45.0586,-738.158,-642.138,-699.663,-608.937,-650.236,-2.04644,-653.995,-691.234 dDocent_Contig_9216 21 . G C 304.212 . AB=0.142857;ABP=181.381;AC=3;AF=0.25;AN=12;AO=26;CIGAR=3M1X20M;DP=212;DPB=208.417;DPRA=25;EPP=59.4686;EPPR=378.675;GTI=0;LEN=1;MEANALT=2.75;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1023;QR=6731;RO=173;RPL=0;RPP=59.4686;RPPR=378.675;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=173;SRP=378.675;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:45:34,3,7:34:1332:3,7:106,272:-12.1403,-14.264,-122.894,0,-101.448,-107.462 0|1:62:50,0,10:50:1938:0,10:0,405:-18.3385,-33.39,-192.59,0,-159.193,-156.183 0|1:54:46,0,6:46:1791:0,6:0,229:-5.03525,-18.8826,-166.113,0,-147.333,-145.527 0|0:39:35,0,3:35:1359:0,3:0,117:0,-10.536,-122.246,-0.761339,-112.628,-111.725 0|0:2:0,0,0:0:0:0,0:0,0:0,0,0,0,0,0 0|0:10:8,1,0:8:311:1,0:37,0:-0.623754,0,-25.2803,-3.03199,-25.5813,-28.6068 dDocent_Contig_9217 37 . T C 31.353 . AB=0.116279;ABP=58.0041;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=244;DPB=244;DPRA=0.508264;EPP=20.3821;EPPR=476.985;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=59.0855;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.764957;PAO=0;PQA=0;PQR=0;PRO=0;QA=327;QR=8898;RO=234;RPL=0;RPP=20.3821;RPPR=476.985;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=234;SRP=511.135;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:29,2:29:1121:2:82:0,-1.55225,-85.9034 0/0:49:48,1:48:1815:1:41:0,-10.6559,-159.491 0/0:46:46,0:46:1751:0:0:0,-13.8474,-154.947 0/1:26:22,3:22:822:3:122:-3.6777,0,-66.6596 0/0:75:74,0:74:2839:0:0:0,-22.2762,-255.272 0/1:17:15,2:15:550:2:82:-2.66217,0,-44.7075 dDocent_Contig_9218 18 . C T 134.139 . AB=0.0952381;ABP=92.6611;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=2X;DP=380;DPB=380;DPRA=1.0678;EPP=16.0391;EPPR=754.34;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=238;QR=13678;RO=346;RPL=0;RPP=16.0391;RPPR=754.34;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=346;SRP=754.34;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:47:41,0,5:41:1592:0,5:0,200:-4.12385,-16.4661,-147.237,0,-130.761,-129.256 0|0:89:78,0,10:78:3088:0,10:0,390:-8.59101,-32.0714,-286.214,0,-254.162,-251.151 0|0:63:55,0,7:55:2196:0,7:0,264:-5.1676,-21.7243,-202.617,0,-180.989,-178.881 0|0:73:71,0,2:71:2810:0,2:0,82:0,-21.3731,-252.613,-14.1955,-245.844,-245.242 0|0:45:45,0,0:45:1790:0,0:0,0:0,-13.5463,-161.322,-13.5463,-161.322,-161.322 0|1:63:56,6,0:56:2202:6,0:238,0:-2.73969,0,-179.309,-19.5974,-181.116,-200.708 dDocent_Contig_9219 10 . C A 8816.13 . AB=0.0888889;ABP=993.926;AC=1;AF=0.0833333;AN=12;AO=60;CIGAR=3X;DP=1891;DPB=1891;DPRA=0;EPP=133.299;EPPR=3166.85;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2306;QR=56912;RO=1457;RPL=0;RPP=133.299;RPPR=3166.85;RPR=60;RUN=1;SAF=60;SAP=133.299;SAR=0;SRF=1457;SRP=3166.85;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:317:219,0,98:219:8567:0,98:0,3941:-259.244,-325.17,-1029.52,0,-704.747,-675.246 0|0:432:338,0,94:338:13222:0,94:0,3743:-206.833,-308.581,-1395.65,0,-1087.47,-1059.17 0|0:138:112,0,26:112:4371:0,26:0,998:-48.5616,-82.2769,-441.573,0,-359.68,-351.854 0|0:329:252,0,77:252:9888:0,77:0,3105:-180.482,-256.342,-1069.52,0,-813.582,-790.402 0|1:325:264,46,13:264:10283:46,13:1785,524:-67.1772,0,-831.264,-103.457,-801.922,-944.666 0|0:350:272,14,64:272:10581:14,64:521,2577:-130.537,-169.79,-1035.07,0,-826.887,-850.253 dDocent_Contig_9220 65 . T C 468.812 . AB=0.153846;ABP=219.489;AC=3;AF=0.25;AN=12;AO=34;CIGAR=1X;DP=588;DPB=588;DPRA=0.648438;EPP=76.8404;EPPR=1203.83;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.987342;PAO=0;PQA=0;PQR=0;PRO=0;QA=1337;QR=20564;RO=553;RPL=34;RPP=76.8404;RPPR=1203.83;RPR=0;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=553;SRP=1203.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:39:35,4:35:1274:4:156:-2.67627,0,-103.197 0/0:95:95,0:95:3581:0:0:0,-28.5978,-322.413 0/1:68:62,6:62:2325:6:239:-1.41385,0,-188.986 0/1:101:79,22:79:2841:22:861:-47.394,0,-225.468 0/0:124:121,2:121:4532:2:81:0,-29.5291,-400.355 0/0:161:161,0:161:6011:0:0:0,-48.4658,-540.937 dDocent_Contig_9221 13 . G A 30.1865 . AB=0.130435;ABP=30.2953;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=186;DPB=186;DPRA=1.07438;EPP=11.6962;EPPR=398.218;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=0.75;PAIREDR=0.686813;PAO=0;PQA=0;PQR=0;PRO=0;QA=164;QR=7307;RO=182;RPL=0;RPP=11.6962;RPPR=398.218;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=182;SRP=398.218;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:40,0:40:1619:0:0:0,-12.0412,-145.936 0/0:54:54,0:54:2152:0:0:0,-16.2556,-193.857 0/1:23:20,3:20:805:3:123:-4.5411,0,-65.8438 0/0:42:41,1:41:1630:1:41:0,-8.54869,-142.831 0/0:6:6,0:6:246:0:0:0,-1.80618,-22.5201 0/0:21:21,0:21:855:0:0:0,-6.32163,-77.2597 dDocent_Contig_9222 18 . C T 131.242 . AB=0.272727;ABP=12.8806;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=174;DPB=174;DPRA=0.955056;EPP=24.725;EPPR=356.96;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=385;QR=6531;RO=163;RPL=0;RPP=24.725;RPPR=356.96;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=163;SRP=356.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:16,6:16:637:6:229:-14.346,0,-51.041 0/0:18:17,1:17:680:1:36:0,-1.82026,-57.9305 0/0:45:41,3:41:1662:3:120:0,-2.36038,-138.642 0/0:15:15,0:15:601:0:0:0,-4.51545,-54.4287 0/0:19:19,0:19:754:0:0:0,-5.71957,-68.1801 0/0:55:55,0:55:2197:0:0:0,-16.5566,-197.897 dDocent_Contig_9223 34 . T G 6431.85 . AB=0.359091;ABP=116.835;AC=6;AF=0.5;AN=12;AO=237;CIGAR=1X2M;DP=660;DPB=660;DPRA=0;EPP=517.649;EPPR=893.314;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9438;QR=15786;RO=410;RPL=0;RPP=517.649;RPPR=893.314;RPR=237;RUN=1;SAF=237;SAP=517.649;SAR=0;SRF=410;SRP=893.314;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:32:17,1,13:17:655:1,13:38,510:-36.9607,-38.9611,-92.451,0,-50.8042,-50.008 0|1:89:54,1,34:54:2095:1,34:29,1345:-94.5233,-108.473,-280.29,0,-169.912,-161.984 0|1:69:43,4,22:43:1678:4,22:152,857:-57.488,-57.9699,-194.7,0,-125.48,-131.32 0|1:101:39,5,57:39:1509:5,57:194,2292:-177.155,-172.957,-295.395,0,-108.008,-106.789 0|1:203:133,0,70:133:5099:0,70:0,2781:-189.299,-229.336,-647.79,0,-418.846,-397.774 0|1:166:124,1,41:124:4750:1,41:34,1653:-98.9811,-133.552,-523.038,0,-387.086,-377.502 dDocent_Contig_9224 31 . A G 6112.44 . AB=0.444444;ABP=12.1787;AC=7;AF=0.583333;AN=12;AO=211;CIGAR=1X1M1D7M;DP=404;DPB=382.6;DPRA=0;EPP=461.191;EPPR=411.247;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.729858;PAIREDR=0.728723;PAO=0;PQA=0;PQR=0;PRO=0;QA=8095;QR=7318;RO=188;RPL=0;RPP=461.191;RPPR=411.247;RPR=211;RUN=1;SAF=211;SAP=461.191;SAR=0;SRF=188;SRP=411.247;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:74:51,23:51:1982:23:887:-57.8654,0,-156.327 0|1:61:41,19:41:1585:19:730:-47.5637,0,-124.446 0|1:61:34,27:34:1324:27:1018:-73.5509,0,-101.078 0|1:70:41,28:41:1603:28:1090:-77.5148,0,-123.645 1|1:62:2,59:2:76:59:2274:-197.63,-11.5415,0 0|1:76:19,55:19:748:55:2096:-166.341,0,-45.1229 dDocent_Contig_9225 17 . G A 556.065 . AB=0.215517;ABP=84.5528;AC=2;AF=0.166667;AN=12;AO=28;CIGAR=1X;DP=314;DPB=314;DPRA=2.34043;EPP=63.8115;EPPR=624.051;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996503;PAO=0;PQA=0;PQR=0;PRO=0;QA=1137;QR=11275;RO=286;RPL=0;RPP=63.8115;RPPR=624.051;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=286;SRP=624.051;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:1,11:1:41:11:446:-36.8836,0,-0.482207 0/0:46:46,0:46:1826:0:0:0,-13.8474,-164.545 0/0:13:13,0:13:528:0:0:0,-3.91339,-47.8671 0/0:35:35,0:35:1405:0:0:0,-10.536,-126.703 0/0:104:101,3:101:3940:3:120:0,-20.1194,-343.425 0/1:104:90,14:90:3535:14:571:-20.4248,0,-286.885 dDocent_Contig_9226 23 . G A 88.1598 . AB=0.14;ABP=59.2949;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=228;DPB=228;DPRA=1.40449;EPP=18.2106;EPPR=482.906;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.571429;PAIREDR=0.393665;PAO=0;PQA=0;PQR=0;PRO=0;QA=278;QR=8825;RO=221;RPL=0;RPP=18.2106;RPPR=482.906;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=221;SRP=482.906;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:37,0:37:1468:0:0:0,-11.1381,-132.362 0/0:35:35,0:35:1398:0:0:0,-10.536,-126.074 0/0:25:25,0:25:988:0:0:0,-7.52575,-89.2194 0/0:51:51,0:51:2040:0:0:0,-15.3525,-183.784 0/0:30:30,0:30:1190:0:0:0,-9.0309,-107.375 0/1:50:43,7:43:1741:7:278:-10.3389,0,-141.85 dDocent_Contig_9227 8 . G A 2488.39 . AB=0.0365112;ABP=922.909;AC=0;AF=0;AN=12;AO=34;CIGAR=2X2M1D3M1X3M1X;DP=844;DPB=841.385;DPRA=0;EPP=76.8404;EPPR=1414.47;GTI=0;LEN=1;MEANALT=4.16667;MQM=29.1471;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0.996923;PAO=0;PQA=0;PQR=0;PRO=0;QA=1345;QR=25275;RO=650;RPL=0;RPP=76.8404;RPPR=1414.47;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=650;SRP=1414.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:139:102,0,2,32:102:3942:0,2,32:0,79,1210:-68.5036,-99.2087,-422.975,-93.2005,-416.967,-416.365,0,-323.793,-317.785,-314.16 0|0:155:128,19,7,0:128:4999:19,7,0:697,277,0:-17.4307,0,-405.374,-41.1948,-396.311,-450.084,-55.9626,-411.093,-452.191,-466.974 0|0:106:92,7,4,3:92:3553:7,4,3:232,159,116:0,-10.0082,-299.758,-20.2119,-294.361,-310.833,-18.1454,-292.336,-302.509,-309.11 0|0:122:71,5,4,41:71:2731:5,4,41:191,157,1530:-103.908,-109.625,-332.329,-116.194,-324.743,-339.194,0,-208.578,-215.143,-211.891 0|0:77:40,5,5,25:40:1568:5,5,25:155,200,954:-66.2182,-66.9114,-194.365,-66.8746,-184.481,-194.328,0,-117.662,-117.625,-121.486 0|0:245:217,6,12,7:217:8482:6,12,7:233,473,264:0,-46.1631,-741.758,-37.3328,-715.547,-731.08,-43.7246,-721.979,-713.108,-739.018 dDocent_Contig_9228 97 . T A 1012.95 . AB=0.17506;ABP=385.445;AC=5;AF=0.416667;AN=12;AO=77;CIGAR=1X;DP=501;DPB=501;DPRA=0;EPP=170.214;EPPR=923.715;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.61039;PAIREDR=0.636792;PAO=0;PQA=0;PQR=0;PRO=0;QA=2747;QR=15143;RO=424;RPL=77;RPP=170.214;RPPR=923.715;RPR=0;RUN=1;SAF=77;SAP=170.214;SAR=0;SRF=424;SRP=923.715;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:57:48,9:48:1698:9:317:-11.7115,0,-135.948 0/1:117:101,16:101:3582:16:559:-15.4186,0,-287.37 0/1:81:54,27:54:1966:27:968:-63.0493,0,-152.825 0/1:78:70,8:70:2526:8:286:-2.60468,0,-204.1 0/0:84:80,4:80:2807:4:143:0,-12.0651,-239.647 0/1:84:71,13:71:2564:13:474:-17.7148,0,-205.714 dDocent_Contig_9229 43 . C A 1728.5 . AB=0.311404;ABP=73.4498;AC=6;AF=0.5;AN=12;AO=71;CIGAR=1X;DP=228;DPB=228;DPRA=0;EPP=157.185;EPPR=341.76;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2785;QR=6090;RO=156;RPL=0;RPP=157.185;RPPR=341.76;RPR=71;RUN=1;SAF=71;SAP=157.185;SAR=0;SRF=156;SRP=341.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:5:3,2:3:121:2:82:-6.27453,0,-9.77484 0/1:41:36,5:36:1414:5:199:-5.94583,0,-115.17 0/1:62:44,18:44:1723:18:692:-43.935,0,-136.627 0/1:22:15,7:15:602:7:282:-19.1299,0,-47.896 0/1:52:35,17:35:1358:17:665:-44.5241,0,-106.82 0/1:46:23,22:23:872:22:865:-64.2625,0,-64.8814 dDocent_Contig_9230 1 . N G 288.813 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=310;QR=0;RO=0;RPL=0;RPP=22.5536;RPPR=0;RPR=9;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:104:-9.70309,-0.90309,0 1/1:6:0,6:0:0:6:206:-18.8768,-1.80618,0 dDocent_Contig_9231 105 . N A 224.823 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=7;CIGAR=3X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=9.4572;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=246;QR=0;RO=0;RPL=0;RPP=18.2106;RPPR=0;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:7:0,7:0:0:7:246:-22.4823,-2.10721,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_9232 12 . T A 129.054 . AB=0.111111;ABP=215.815;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X;DP=350;DPB=350;DPRA=0.844776;EPP=50.7827;EPPR=715.253;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=875;QR=13085;RO=328;RPL=0;RPP=50.7827;RPPR=715.253;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=328;SRP=715.253;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:66:65,1:65:2564:1:40:0,-15.8723,-226.889 0/1:62:55,7:55:2196:7:284:-7.27013,0,-179.152 0/0:28:27,1:27:1089:1:40:0,-4.43316,-94.3002 0/0:27:25,2:25:1005:2:82:0,-0.348132,-82.9661 0/0:67:67,0:67:2698:0:0:0,-20.169,-242.936 0/1:100:89,11:89:3533:11:429:-8.85679,0,-287.889 dDocent_Contig_9233 31 . T C 69.3841 . AB=0.181818;ABP=22.3561;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=333;DPB=333;DPRA=0.353698;EPP=11.6962;EPPR=717.425;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.589666;PAO=0;PQA=0;PQR=0;PRO=0;QA=160;QR=13062;RO=329;RPL=0;RPP=11.6962;RPPR=717.425;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=329;SRP=717.425;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:18,4:18:720:4:160:-8.16026,0,-58.5028 0/0:66:66,0:66:2604:0:0:0,-19.868,-234.496 0/0:51:51,0:51:2041:0:0:0,-15.3525,-183.88 0/0:60:60,0:60:2366:0:0:0,-18.0618,-213.091 0/0:57:57,0:57:2261:0:0:0,-17.1587,-203.667 0/0:77:77,0:77:3070:0:0:0,-23.1793,-276.391 dDocent_Contig_9234 40 . T A 120.304 . AB=0.666667;ABP=4.45795;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=81;DPB=81;DPRA=0.4;EPP=11.6962;EPPR=170.214;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=163;QR=3076;RO=77;RPL=0;RPP=11.6962;RPPR=170.214;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=77;SRP=170.214;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:6:2,4:2:82:4:163:-13.2522,0,-5.9735 0/0:8:8,0:8:321:0:0:0,-2.40824,-29.2579 0/0:12:12,0:12:489:0:0:0,-3.61236,-44.3611 0/0:22:22,0:22:880:0:0:0,-6.62266,-79.505 0/0:13:13,0:13:505:0:0:0,-3.91339,-45.7911 0/0:20:20,0:20:799:0:0:0,-6.0206,-72.2257 dDocent_Contig_9235 8 . G C 215.219 . AB=0.241379;ABP=120.944;AC=3;AF=0.25;AN=12;AO=69;CIGAR=1X;DP=376;DPB=376;DPRA=1.47111;EPP=127.917;EPPR=665.309;GTI=0;LEN=1;MEANALT=1.4;MQM=19.2319;MQMR=49.6033;NS=6;NUMALT=1;ODDS=0;PAIRED=0.681159;PAIREDR=0.829508;PAO=0;PQA=0;PQR=0;PRO=0;QA=2669;QR=11766;RO=305;RPL=0;RPP=152.842;RPPR=665.309;RPR=69;RUN=1;SAF=66;SAP=127.917;SAR=3;SRF=305;SRP=665.309;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:45:45,0:45:1740:0:0:0,-13.5463,-149.503 0/1:73:54,19:54:2078:19:732:-8.70437,0,-155.675 0/1:47:37,10:37:1422:10:380:-5.81356,0,-103.704 0/1:83:63,20:63:2436:20:778:-12.2258,0,-179.072 0/0:46:37,8:37:1428:8:312:0,-2.16231,-114.49 0/0:82:69,12:69:2662:12:467:0,-5.74414,-206.287 dDocent_Contig_9236 36 . T G 1301.49 . AB=0.263636;ABP=109.768;AC=6;AF=0.5;AN=12;AO=58;CIGAR=1X;DP=220;DPB=220;DPRA=0;EPP=128.956;EPPR=354.789;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.534483;PAIREDR=0.493827;PAO=0;PQA=0;PQR=0;PRO=0;QA=2283;QR=5860;RO=162;RPL=0;RPP=128.956;RPPR=354.789;RPR=58;RUN=1;SAF=58;SAP=128.956;SAR=0;SRF=162;SRP=354.789;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:23,11:23:825:11:446:-30.261,0,-64.3273 0/1:39:34,5:34:1228:5:204:-7.00386,0,-99.07 0/1:31:24,7:24:875:7:286:-16.7829,0,-69.737 0/1:42:28,14:28:1022:14:560:-38.0982,0,-79.6457 0/1:41:30,11:30:1092:11:404:-24.3446,0,-86.2384 0/1:33:23,10:23:818:10:383:-24.8808,0,-64.0011 dDocent_Contig_9237 17 . A T 2509.17 . AB=0.333333;ABP=71.7736;AC=5;AF=0.416667;AN=12;AO=100;CIGAR=1X;DP=383;DPB=383;DPRA=0;EPP=220.158;EPPR=617.537;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8516;NS=6;NUMALT=1;ODDS=0;PAIRED=0.65;PAIREDR=0.597173;PAO=0;PQA=0;PQR=0;PRO=0;QA=4031;QR=11291;RO=283;RPL=0;RPP=220.158;RPPR=617.537;RPR=100;RUN=1;SAF=100;SAP=220.158;SAR=0;SRF=283;SRP=617.537;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:22,16:22:871:16:648:-47.2147,0,-67.2589 0/1:42:29,13:29:1136:13:516:-34.1363,0,-89.8796 0/1:55:36,19:36:1451:19:768:-52.8823,0,-112.744 0/1:85:51,34:51:2034:34:1366:-97.6067,0,-157.658 0/1:65:52,13:52:2067:13:528:-28.2991,0,-166.653 0/0:98:93,5:93:3732:5:205:0,-10.6659,-317.047 dDocent_Contig_9238 11 . T A 867.732 . AB=0.0869565;ABP=71.1757;AC=0;AF=0;AN=12;AO=4;CIGAR=2M2X1M1X6M;DP=213;DPB=245.5;DPRA=0;EPP=11.6962;EPPR=313.531;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.839161;PAO=0;PQA=0;PQR=0;PRO=0;QA=150;QR=5498;RO=143;RPL=0;RPP=11.6962;RPPR=313.531;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=143;SRP=313.531;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:30:21,0,5,2,2:21:809:0,5,2,2:0,152,66,75:-5.8225,-12.1441,-78.614,0,-66.4557,-64.9505,-6.80651,-73.2804,-61.1236,-72.6783,-5.98651,-72.47,-60.3126,-67.1364,-71.8679 0|0:31:21,0,0,0,10:21:812:0,0,0,10:0,0,0,353:-22.7715,-29.0931,-95.8103,-29.0931,-95.8103,-95.8103,-29.0931,-95.8103,-95.8103,-95.8103,0,-67.0808,-67.0808,-67.0808,-64.0705 0|0:33:19,0,0,5,9:19:736:0,0,5,9:0,0,173,327:-20.9957,-26.7153,-87.1937,-26.7153,-87.1937,-87.1937,-12.6629,-73.1402,-73.1402,-71.6351,0,-60.4937,-60.4937,-46.4437,-57.7844 0|0:46:33,0,0,6,7:33:1264:0,0,6,7:0,0,213,262:-11.5336,-21.4676,-125.214,-21.4676,-125.214,-125.214,-4.12211,-107.863,-107.863,-106.057,0,-103.758,-103.758,-86.4075,-101.65 0|0:27:14,0,0,1,12:14:533:0,0,1,12:0,0,36,424:-30.309,-34.5235,-78.254,-34.5235,-78.254,-78.254,-31.5855,-75.3169,-75.3169,-75.0159,0,-43.7359,-43.7359,-40.7999,-40.1236 0|0:46:35,4,0,0,6:35:1344:4,0,0,6:150,0,0,210:-6.56268,-4.79112,-113.966,-17.0987,-115.17,-127.456,-17.0987,-115.17,-127.456,-127.456,0,-98.0902,-110.376,-110.376,-108.57 dDocent_Contig_9239 34 . A G 2785.19 . AB=0.0535714;ABP=99.951;AC=0;AF=0;AN=12;AO=3;CIGAR=1M1D1X11M;DP=278;DPB=278.929;DPRA=0;EPP=9.52472;EPPR=300.502;GTI=0;LEN=1;MEANALT=6;MQM=60;MQMR=60;NS=6;NUMALT=8;ODDS=0;PAIRED=1;PAIREDR=0.883212;PAO=0;PQA=0;PQR=0;PRO=0;QA=118;QR=5317;RO=137;RPL=0;RPP=9.52472;RPPR=300.502;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=137;SRP=300.502;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:39:20,0,0,0,0,0,17,1,0:20:763:0,0,0,0,0,17,1,0:0,0,0,0,0,648,41,0:-47.1401,-53.1607,-115.757,-53.1607,-115.757,-115.757,-53.1607,-115.757,-115.757,-115.757,-53.1607,-115.757,-115.757,-115.757,-115.757,-53.1607,-115.757,-115.757,-115.757,-115.757,-115.757,0,-62.6141,-62.6141,-62.6141,-62.6141,-62.6141,-57.4966,-49.7749,-112.372,-112.372,-112.372,-112.372,-112.372,-59.2286,-112.071,-53.1607,-115.757,-115.757,-115.757,-115.757,-115.757,-62.6141,-112.372,-115.757 0|0:36:13,0,0,2,0,0,14,3,3:13:506:0,0,2,0,0,14,3,3:0,0,80,0,0,547,121,119:-41.0557,-44.9691,-86.5556,-44.9691,-86.5556,-86.5556,-38.7545,-80.3406,-80.3406,-79.7385,-44.9691,-86.5556,-86.5556,-80.3406,-86.5556,-44.9691,-86.5556,-86.5556,-80.3406,-86.5556,-86.5556,0,-41.5885,-41.5885,-35.3738,-41.5885,-41.5885,-37.3741,-34.9927,-76.58,-76.58,-70.365,-76.58,-76.58,-31.6118,-75.6769,-35.1719,-76.7588,-76.7588,-70.5438,-76.7588,-76.7588,-31.791,-66.7831,-75.8557 0|0:39:20,0,0,0,0,2,11,1,4:20:781:0,0,0,0,2,11,1,4:0,0,0,0,54,447,41,160:-30.8989,-36.9195,-101.135,-36.9195,-101.135,-101.135,-36.9195,-101.135,-101.135,-101.135,-36.9195,-101.135,-101.135,-101.135,-101.135,-33.2178,-97.4261,-97.4261,-97.4261,-97.4261,-96.8241,0,-64.2563,-64.2563,-64.2563,-64.2563,-60.5495,-60.945,-33.5332,-97.7506,-97.7506,-97.7506,-97.7506,-94.0414,-60.8708,-97.4496,-23.7316,-87.9534,-87.9534,-87.9534,-87.9534,-84.2449,-51.0716,-84.5684,-86.7493 0|0:56:22,3,0,0,6,0,21,1,0:22:859:3,0,0,6,0,21,1,0:118,0,0,231,0,839,41,0:-62.4917,-59.4074,-129.121,-69.1144,-130.024,-139.731,-69.1144,-130.024,-139.731,-139.731,-50.1485,-111.058,-120.764,-120.764,-118.958,-69.1144,-130.024,-139.731,-139.731,-120.764,-139.731,0,-60.918,-70.6255,-70.6255,-51.6584,-70.6255,-64.3038,-65.7297,-126.64,-136.346,-136.346,-117.38,-136.346,-67.2407,-136.045,-69.1144,-130.024,-139.731,-139.731,-120.764,-139.731,-70.6255,-136.346,-139.731 0|0:49:34,0,2,0,0,0,13,0,0:34:1313:0,2,0,0,0,13,0,0:0,69,0,0,0,514,0,0:-32.1038,-42.3388,-150.165,-36.7398,-144.561,-143.959,-42.3388,-150.165,-144.561,-150.165,-42.3388,-150.165,-144.561,-150.165,-150.165,-42.3388,-150.165,-144.561,-150.165,-150.165,-150.165,0,-107.866,-102.263,-107.866,-107.866,-107.866,-103.953,-42.3388,-150.165,-144.561,-150.165,-150.165,-150.165,-107.866,-150.165,-42.3388,-150.165,-144.561,-150.165,-150.165,-150.165,-107.866,-150.165,-150.165 0|0:59:28,0,4,0,0,1,26,0,0:28:1095:0,4,0,0,1,26,0,0:0,138,0,0,21,1026,0,0:-76.0508,-84.4796,-174.514,-73.2735,-163.305,-162.101,-84.4796,-174.514,-163.305,-174.514,-84.4796,-174.514,-163.305,-174.514,-174.514,-83.1667,-173.198,-161.99,-173.198,-173.198,-172.897,0,-90.0964,-78.8896,-90.0964,-90.0964,-88.783,-82.2696,-84.4796,-174.514,-163.305,-174.514,-174.514,-173.198,-90.0964,-174.514,-84.4796,-174.514,-163.305,-174.514,-174.514,-173.198,-90.0964,-174.514,-174.514 dDocent_Contig_9240 104 . N G 79.3239 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=4X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=85;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:3:0,3:0:0:3:85:-7.93184,-0.90309,0 .:.:.:.:.:.:.:. dDocent_Contig_9241 98 . N C 278.26 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=283;QR=0;RO=0;RPL=9;RPP=22.5536;RPPR=0;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 1/1:3:0,3:0:0:3:91:-8.49117,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:60:-5.69897,-0.60206,0 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 1/1:2:0,2:0:0:2:68:-6.45788,-0.60206,0 dDocent_Contig_9242 8 . G A 7772.86 . AB=0.328524;ABP=233.126;AC=6;AF=0.5;AN=12;AO=296;CIGAR=1X11M;DP=901;DPB=903.417;DPRA=0;EPP=645.766;EPPR=1010.57;GTI=0;LEN=1;MEANALT=4.16667;MQM=60;MQMR=60;NS=6;NUMALT=6;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11312;QR=17875;RO=464;RPL=0;RPP=645.766;RPPR=1010.57;RPR=296;RUN=1;SAF=296;SAP=645.766;SAR=0;SRF=464;SRP=1010.57;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:131:65,8,8,0,8,42,0:65:2503:8,8,0,8,42,0:308,308,0,313,1601,0:-111.762,-106.04,-309.134,-106.04,-286.254,-309.134,-131.329,-311.542,-311.543,-336.832,-105.593,-285.807,-285.807,-311.096,-308.687,0,-180.211,-180.211,-205.5,-179.764,-192.857,-131.329,-311.542,-311.543,-336.832,-311.096,-205.5,-336.832 0|1:270:154,14,12,0,11,78,0:154:5922:14,12,0,11,78,0:532,456,0,390,2987,0:-198.78,-201.508,-683.464,-207.742,-650.282,-690.3,-245.139,-687.678,-693.912,-731.308,-213.376,-655.914,-662.148,-699.544,-696.233,0,-442.546,-448.78,-486.176,-454.412,-462.696,-245.139,-687.678,-693.912,-731.308,-699.544,-486.176,-731.308 0|1:141:66,4,15,0,6,50,0:66:2551:4,15,0,6,50,0:144,565,0,203,1913,0:-137.126,-145.246,-353.56,-110.699,-308.469,-315.701,-156.994,-354.764,-320.217,-366.511,-140.547,-338.316,-303.77,-350.064,-348.258,0,-197.782,-163.235,-209.529,-193.082,-194.477,-156.994,-354.764,-320.217,-366.511,-350.064,-209.529,-366.511 0|1:156:74,17,13,0,4,47,0:74:2852:17,13,0,4,47,0:650,490,0,139,1791,0:-124.642,-93.5815,-322.65,-106.765,-287.614,-337.037,-146.919,-327.768,-340.951,-381.104,-135.621,-316.47,-329.652,-369.806,-368.602,0,-180.852,-194.035,-234.188,-222.89,-220.04,-146.919,-327.768,-340.951,-381.104,-369.806,-234.188,-381.104 0|1:120:57,0,0,11,0,49,0:57:2209:0,0,11,0,49,0:0,0,408,0,1874,0:-136.639,-153.797,-335.276,-153.797,-335.276,-335.276,-120.416,-301.894,-301.894,-298.583,-153.797,-335.276,-335.276,-301.894,-335.276,0,-181.502,-181.502,-148.12,-181.502,-166.751,-153.797,-335.276,-335.276,-301.894,-335.276,-181.502,-335.276 0|1:83:48,0,0,0,0,30,5:48:1838:0,0,0,0,30,5:0,0,0,0,1146,203:-79.5585,-94.0079,-244.833,-94.0079,-244.833,-244.833,-94.0079,-244.833,-244.833,-244.833,-94.0079,-244.833,-244.833,-244.833,-244.833,0,-150.806,-150.806,-150.806,-150.806,-141.775,-77.2621,-228.089,-228.089,-228.089,-228.089,-134.061,-226.584 dDocent_Contig_9243 20 . A G 259.247 . AB=0.177778;ABP=84.1751;AC=4;AF=0.333333;AN=12;AO=17;CIGAR=1X;DP=122;DPB=122;DPRA=2.85;EPP=39.9253;EPPR=231.015;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.647059;PAIREDR=0.8;PAO=0;PQA=0;PQR=0;PRO=0;QA=693;QR=4241;RO=105;RPL=0;RPP=39.9253;RPPR=231.015;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=105;SRP=231.015;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:10,2:10:400:2:81:-4.07337,0,-32.747 0/0:8:8,0:8:324:0:0:0,-2.40824,-29.5288 0/1:29:21,8:21:850:8:328:-21.1605,0,-68.0816 0/1:21:18,3:18:729:3:122:-5.05086,0,-59.6125 0/1:28:25,3:25:1009:3:121:-2.85115,0,-82.6733 0/0:24:23,1:23:929:1:41:0,-3.13015,-79.8163 dDocent_Contig_9244 42 . T C 2774.35 . AB=0.434211;ABP=11.5819;AC=4;AF=0.333333;AN=12;AO=99;CIGAR=1X;DP=255;DPB=255;DPRA=4.22222;EPP=217.986;EPPR=341.76;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3912;QR=6137;RO=156;RPL=0;RPP=217.986;RPPR=341.76;RPR=99;RUN=1;SAF=99;SAP=217.986;SAR=0;SRF=156;SRP=341.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:48:36,12:36:1422:12:484:-29.4623,0,-113.793 0/1:33:19,14:19:746:14:550:-39.907,0,-57.5305 0/1:82:54,28:54:2127:28:1110:-75.5065,0,-166.946 0/1:65:20,45:20:778:45:1768:-139.781,0,-50.7706 0/0:10:10,0:10:397:0:0:0,-3.0103,-36.0881 0/0:17:17,0:17:667:0:0:0,-5.11751,-60.3592 dDocent_Contig_9245 35 . T C 3659.77 . AB=0.283495;ABP=212.69;AC=6;AF=0.5;AN=12;AO=146;CIGAR=1X;DP=515;DPB=515;DPRA=0;EPP=320.045;EPPR=804.284;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.472603;PAIREDR=0.707317;PAO=0;PQA=0;PQR=0;PRO=0;QA=5894;QR=14824;RO=369;RPL=0;RPP=320.045;RPPR=804.284;RPR=146;RUN=1;SAF=146;SAP=320.045;SAR=0;SRF=369;SRP=804.284;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:68:51,17:51:2056:17:695:-42.4071,0,-164.748 0/1:86:69,17:69:2793:17:671:-34.829,0,-225.575 0/1:75:58,17:58:2348:17:686:-39.488,0,-188.886 0/1:91:63,28:63:2546:28:1127:-74.3167,0,-201.872 0/1:102:69,33:69:2750:33:1332:-89.4331,0,-216.908 0/1:93:59,34:59:2331:34:1383:-96.725,0,-181.941 dDocent_Contig_9246 34 . T C 9710.12 . AB=0.604915;ABP=53.5863;AC=6;AF=0.5;AN=12;AO=320;CIGAR=1X;DP=529;DPB=529;DPRA=0;EPP=697.881;EPPR=456.848;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.603125;PAIREDR=0.607656;PAO=0;PQA=0;PQR=0;PRO=0;QA=12671;QR=8335;RO=209;RPL=0;RPP=697.881;RPPR=456.848;RPR=320;RUN=1;SAF=320;SAP=697.881;SAR=0;SRF=209;SRP=456.848;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:61:30,31:30:1207:31:1216:-91.3516,0,-90.5412 0/1:113:42,71:42:1642:71:2817:-219.631,0,-113.994 0/1:45:23,22:23:925:22:889:-66.771,0,-70.0065 0/1:66:39,27:39:1555:27:1068:-76.5431,0,-120.318 0/1:113:30,83:30:1204:83:3313:-264.206,0,-74.616 0/1:131:45,86:45:1802:86:3368:-263.732,0,-122.957 dDocent_Contig_9247 121 . C A 360.53 . AB=0.47619;ABP=3.1137;AC=3;AF=0.25;AN=12;AO=15;CIGAR=1X;DP=117;DPB=117;DPRA=1.34;EPP=27.4756;EPPR=224.5;GTI=0;LEN=1;MEANALT=1;MQM=57.6;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.933333;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=515;QR=3316;RO=102;RPL=0;RPP=35.5824;RPPR=224.5;RPR=15;RUN=1;SAF=1;SAP=27.4756;SAR=14;SRF=0;SRP=224.5;SRR=102;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:233:0:0:0,-2.10721,-21.2961 0/0:42:41,1:41:1347:1:38:0,-10.2601,-119.138 0/0:14:14,0:14:459:0:0:0,-4.21442,-41.6241 0/0:29:29,0:29:918:0:0:0,-8.72987,-82.9098 1/1:4:0,4:0:0:4:136:-12.5759,-1.20412,0 0/1:21:11,10:11:359:10:341:-24.6989,0,-26.3038 dDocent_Contig_9248 21 . G A 143.916 . AB=0.241379;ABP=19.8579;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=1X;DP=98;DPB=98;DPRA=0.84058;EPP=18.2106;EPPR=200.614;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.989011;PAO=0;PQA=0;PQR=0;PRO=0;QA=283;QR=3638;RO=91;RPL=0;RPP=18.2106;RPPR=200.614;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=91;SRP=200.614;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:10:5,5:5:201:5:202:-15.5512,0,-15.4602 0/1:19:17,2:17:677:2:81:-1.96616,0,-55.5369 0/0:19:19,0:19:767:0:0:0,-5.71957,-69.3486 0/0:11:11,0:11:441:0:0:0,-3.31133,-40.0444 0/0:16:16,0:16:632:0:0:0,-4.81648,-57.214 0/0:23:23,0:23:920:0:0:0,-6.92369,-83.106 dDocent_Contig_9249 10 . G A 544.749 . AB=0.19863;ABP=118.188;AC=4;AF=0.333333;AN=12;AO=34;CIGAR=1X2M1X;DP=219;DPB=219;DPRA=0;EPP=76.8404;EPPR=404.733;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.518919;PAO=0;PQA=0;PQR=0;PRO=0;QA=1333;QR=6939;RO=185;RPL=0;RPP=76.8404;RPPR=404.733;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=185;SRP=404.733;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:46:43,3:43:1606:3:118:0,-2.84518,-133.805 0|1:48:44,4:44:1663:4:159:-0.242682,0,-135.484 0|0:27:25,2:25:942:2:77:0,-0.81961,-77.7808 0|1:48:40,8:40:1479:8:317:-14.4464,0,-118.939 0|1:28:14,14:14:524:14:546:-41.0541,0,-39.07 0|1:22:19,3:19:725:3:116:-4.19433,0,-58.9548 dDocent_Contig_9250 8 . G T 664.82 . AB=0.308411;ABP=37.1247;AC=6;AF=0.5;AN=12;AO=33;CIGAR=1X;DP=107;DPB=107;DPRA=0;EPP=74.6689;EPPR=163.699;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=37.9054;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1255;QR=2819;RO=74;RPL=0;RPP=74.6689;RPPR=163.699;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=74;SRP=163.699;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:10:8,2:8:310:2:78:-3.91733,0,-20.9884 0/1:13:7,6:7:254:6:225:-15.5605,0,-18.0808 0/1:32:22,10:22:842:10:372:-22.25,0,-52.1406 0/1:13:7,6:7:270:6:233:-16.0866,0,-19.2562 0/1:10:9,1:9:346:1:35:-0.370402,0,-26.5927 0/1:29:21,8:21:797:8:312:-17.8868,0,-59.0404 dDocent_Contig_9251 35 . G A 284.67 . AB=0.366667;ABP=7.64277;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=170;DPB=170;DPRA=0.428571;EPP=26.8965;EPPR=346.103;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.818182;PAIREDR=0.848101;PAO=0;PQA=0;PQR=0;PRO=0;QA=444;QR=6049;RO=158;RPL=0;RPP=26.8965;RPPR=346.103;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=158;SRP=346.103;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:43,0:43:1594:0:0:0,-12.9443,-143.293 0/0:35:35,0:35:1361:0:0:0,-10.536,-122.749 0/0:22:22,0:22:863:0:0:0,-6.62266,-77.9785 0/0:39:39,0:39:1523:0:0:0,-11.7402,-137.32 0/1:22:16,6:16:586:6:241:-15.444,0,-46.4336 0/1:8:3,5:3:122:5:203:-16.2448,0,-8.96425 dDocent_Contig_9253 22 . T C 1332.26 . AB=0.186916;ABP=94.1107;AC=3;AF=0.25;AN=12;AO=72;CIGAR=1X;DP=976;DPB=976;DPRA=0;EPP=159.356;EPPR=1966.02;GTI=0;LEN=1;MEANALT=1;MQM=58.6944;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.541667;PAIREDR=0.998894;PAO=0;PQA=0;PQR=0;PRO=0;QA=2880;QR=35958;RO=904;RPL=0;RPP=159.356;RPPR=1966.02;RPR=72;RUN=1;SAF=72;SAP=159.356;SAR=0;SRF=904;SRP=1966.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:312:307,5:307:12187:5:194:0,-76.0899,-1078.15 0/0:235:227,8:227:9076:8:320:0,-42.6494,-788.207 0/0:128:122,6:122:4871:6:236:0,-16.9212,-416.655 0/0:168:161,7:161:6340:7:285:0,-24.5486,-544.328 1/1:26:0,26:0:0:26:1043:-94.1608,-7.82678,0 0/1:107:87,20:87:3484:20:802:-40.2867,0,-281.387 dDocent_Contig_9254 163 . A C 3090.56 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=92;CIGAR=1X;DP=1343;DPB=1343;DPRA=0.384924;EPP=202.786;EPPR=2674.1;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3580;QR=48750;RO=1250;RPL=92;RPP=202.786;RPPR=2674.1;RPR=0;RUN=1;SAF=0;SAP=202.786;SAR=92;SRF=0;SRP=2717.35;SRR=1250;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:340:340,0:340:13188:0:0:0,-102.35,-1186.03 0/0:405:404,0:404:15640:0:0:0,-121.616,-1406.08 0/0:159:159,0:159:6331:0:0:0,-47.8638,-569.53 0/0:323:323,0:323:12654:0:0:0,-97.2327,-1137.99 0/0:20:20,0:20:789:0:0:0,-6.0206,-71.3258 1/1:96:4,92:4:148:92:3580:-308.579,-15.2213,0 dDocent_Contig_9255 60 . G T 1098.8 . AB=0.290503;ABP=71.2479;AC=5;AF=0.416667;AN=12;AO=52;CIGAR=1X;DP=217;DPB=217;DPRA=0.942105;EPP=115.927;EPPR=361.303;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1892;QR=6255;RO=165;RPL=52;RPP=115.927;RPPR=361.303;RPR=0;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=165;SRP=361.303;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:44:24,20:24:902:20:720:-51.8692,0,-68.2512 0/1:46:35,11:35:1311:11:382:-20.8575,0,-104.428 0/1:52:40,12:40:1515:12:461:-26.1872,0,-120.965 0/0:38:38,0:38:1447:0:0:0,-11.4391,-130.508 0/1:17:10,7:10:383:7:255:-18.1802,0,-29.7067 0/1:20:18,2:18:697:2:74:-1.00528,0,-57.0433 dDocent_Contig_9256 34 . G C 48.3491 . AB=0.157895;ABP=22.325;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=3M1X10M;DP=103;DPB=104.643;DPRA=1.04717;EPP=11.6962;EPPR=196.271;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.75;PAIREDR=0.921348;PAO=0;PQA=0;PQR=0;PRO=0;QA=158;QR=3501;RO=89;RPL=0;RPP=11.6962;RPPR=196.271;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=89;SRP=196.271;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:17:15,0,0:15:593:0,0:0,0:0,-4.51545,-53.3044,-4.51545,-53.3044,-53.3044 0|1:19:14,0,3:14:548:0,3:0,122:-5.84684,-10.0613,-55.1056,0,-45.0404,-44.1373 0|0:13:11,2,0:11:428:2,0:64,0:-2.1624,0,-34.9593,-5.47373,-35.5614,-40.7047 0|0:18:16,1,1:16:639:1,1:41,36:0,-1.40758,-53.7744,-1.90388,-51.1403,-54.224 0|0:11:11,0,0:11:422:0,0:0,0:0,-3.31133,-38.3294,-3.31133,-38.3294,-38.3294 0|0:25:22,2,0:22:871:2,0:77,0:0,-0.311112,-71.3906,-6.62266,-71.9927,-78.3133 dDocent_Contig_9257 18 . T C 62.454 . AB=0.173913;ABP=24.253;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=143;DPB=143;DPRA=0.958333;EPP=11.6962;EPPR=302.673;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.753623;PAO=0;PQA=0;PQR=0;PRO=0;QA=159;QR=5480;RO=138;RPL=0;RPP=11.6962;RPPR=302.673;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=138;SRP=302.673;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:6:6,0:6:229:0:0:0,-1.80618,-20.9726 0/0:39:39,0:39:1550:0:0:0,-11.7402,-139.74 0/0:31:30,0:30:1193:0:0:0,-9.0309,-107.539 0/0:26:26,0:26:1043:0:0:0,-7.82678,-94.1636 0/1:23:19,4:19:760:4:159:-7.76826,0,-61.7973 0/0:18:18,0:18:705:0:0:0,-5.41854,-63.7743 dDocent_Contig_9258 19 . T C 152.227 . AB=0.222222;ABP=27.1378;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=143;DPB=143;DPRA=0.588889;EPP=22.5536;EPPR=291.816;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.888889;PAIREDR=0.984962;PAO=0;PQA=0;PQR=0;PRO=0;QA=359;QR=5344;RO=133;RPL=0;RPP=22.5536;RPPR=291.816;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=133;SRP=291.816;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:14:11,2:11:441:2:81:-3.36454,0,-35.7198 0/0:10:10,0:10:388:0:0:0,-3.0103,-35.2733 0/1:22:16,6:16:644:6:237:-15.0768,0,-51.671 0/0:17:16,1:16:646:1:41:0,-1.02294,-54.3782 0/0:25:25,0:25:1016:0:0:0,-7.52575,-91.7314 0/0:55:55,0:55:2209:0:0:0,-16.5566,-198.975 dDocent_Contig_9259 7 . A T 78.6758 . AB=0.208333;ABP=20.744;AC=2;AF=0.166667;AN=12;AO=5;CIGAR=1X;DP=103;DPB=103;DPRA=0.607595;EPP=13.8677;EPPR=215.815;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.714286;PAO=0;PQA=0;PQR=0;PRO=0;QA=195;QR=3750;RO=98;RPL=0;RPP=13.8677;RPPR=215.815;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=98;SRP=215.815;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:14:11,3:11:426:3:117:-6.69596,0,-34.4803 0/0:12:12,0:12:455:0:0:0,-3.61236,-41.299 0/1:10:8,2:8:311:2:78:-4.39317,0,-25.344 0/0:20:20,0:20:770:0:0:0,-6.0206,-69.6284 0/0:12:12,0:12:461:0:0:0,-3.61236,-41.8404 0/0:35:35,0:35:1327:0:0:0,-10.536,-119.716 dDocent_Contig_9261 11 . G A 3194.54 . AB=0.256121;ABP=277.331;AC=6;AF=0.5;AN=12;AO=136;CIGAR=1X;DP=531;DPB=531;DPRA=0;EPP=298.331;EPPR=860.742;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5430;QR=15631;RO=395;RPL=0;RPP=298.331;RPPR=860.742;RPR=136;RUN=1;SAF=136;SAP=298.331;SAR=0;SRF=395;SRP=860.742;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:41,13:41:1637:13:513:-30.2577,0,-131.305 0/1:108:90,18:90:3511:18:715:-32.1636,0,-283.529 0/1:76:63,13:63:2508:13:521:-24.3575,0,-202.991 0/1:100:83,17:83:3318:17:686:-31.9655,0,-268.571 0/1:105:55,50:55:2187:50:2003:-148.848,0,-165.393 0/1:88:63,25:63:2470:25:992:-63.0836,0,-195.947 dDocent_Contig_9262 107 . N G 213.714 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=227;QR=0;RO=0;RPL=0;RPP=18.2106;RPPR=0;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:163:-14.9913,-1.50515,0 1/1:2:0,2:0:0:2:64:-6.07837,-0.60206,0 dDocent_Contig_9264 7 . A G 33914.3 . AB=0.57172;ABP=112.339;AC=6;AF=0.5;AN=12;AO=1399;CIGAR=1X3M;DP=2447;DPB=2447;DPRA=0;EPP=3040.9;EPPR=1312.41;GTI=0;LEN=1;MEANALT=12.6667;MQM=59.148;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.859185;PAIREDR=0.887231;PAO=0;PQA=0;PQR=0;PRO=0;QA=44609;QR=22865;RO=603;RPL=0;RPP=3040.9;RPPR=1312.41;RPR=1399;RUN=1;SAF=1399;SAP=3040.9;SAR=0;SRF=603;SRP=1312.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:374:88,4,8,236:88:3340:4,8,236:119,292,7437:-569.31,-586.298,-858.99,-571.944,-836.338,-843.432,0,-264.42,-250.065,-202.878 0|1:531:142,13,19,287:142:5400:13,19,287:437,634,9026:-681.408,-688.756,-1127.74,-672.845,-1080.35,-1110.03,0,-407.529,-391.619,-356.531 0|1:310:69,6,27,179:69:2600:6,27,179:217,913,5840:-450.075,-453.133,-664.391,-396.846,-592.198,-601.783,0,-195.372,-139.089,-159.201 0|1:485:101,27,25,288:101:3833:27,25,288:929,804,9194:-707.775,-662.736,-968.924,-673.382,-912.255,-980.172,0,-238.893,-249.541,-227.637 0|1:301:94,2,18,141:94:3534:2,18,141:37,595,4474:-331.395,-356.966,-645.907,-311.586,-598.404,-595.712,0,-286.827,-241.451,-247.108 0|1:446:109,5,17,268:109:4158:5,17,268:166,584,8638:-662.687,-682.073,-1021.7,-648.083,-975.786,-984.094,0,-327.723,-293.735,-260.472 dDocent_Contig_9265 16 . A T 110.853 . AB=0.189189;ABP=34.0565;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=249;DPB=249;DPRA=0.872642;EPP=18.2106;EPPR=528.507;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.983471;PAO=0;PQA=0;PQR=0;PRO=0;QA=260;QR=9697;RO=242;RPL=0;RPP=18.2106;RPPR=528.507;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=242;SRP=528.507;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:38,0:38:1485:0:0:0,-11.4391,-133.9 0/1:37:30,7:30:1214:7:260:-12.6082,0,-98.3932 0/0:19:19,0:19:760:0:0:0,-5.71957,-68.7193 0/0:34:34,0:34:1374:0:0:0,-10.235,-123.913 0/0:46:46,0:46:1844:0:0:0,-13.8474,-166.172 0/0:75:75,0:75:3020:0:0:0,-22.5772,-271.878 dDocent_Contig_9266 18 . G A 2408.88 . AB=0.0430108;ABP=509.103;AC=0;AF=0;AN=12;AO=16;CIGAR=2X3M2X3M;DP=847;DPB=847;DPRA=0;EPP=37.7539;EPPR=1451.38;GTI=0;LEN=1;MEANALT=5;MQM=16;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0;PAIREDR=0.871064;PAO=0;PQA=0;PQR=0;PRO=0;QA=256;QR=25953;RO=667;RPL=0;RPP=37.7539;RPPR=1451.38;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=667;SRP=1451.38;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:174:135,0,4,0,34:135:5271:0,4,0,34:0,158,0,1349:-70.4554,-111.094,-544.391,-98.0922,-531.389,-530.185,-111.094,-544.391,-531.389,-544.391,0,-433.35,-420.348,-433.35,-423.115 0|0:148:97,4,6,1,37:97:3773:4,6,1,37:64,235,40,1462:-91.1804,-116.908,-425.751,-101.053,-407.631,-409.31,-117.084,-423.66,-407.821,-426.843,0,-306.654,-290.812,-306.841,-298.998 0|0:77:57,5,2,5,8:57:2217:5,2,5,8:80,80,195,303:-7.7078,-20.5652,-201.245,-18.2677,-196.16,-199.905,-8.81516,-186.721,-184.477,-189.563,0,-177.923,-175.678,-166.239,-179.861 0|0:128:108,0,0,1,17:108:4247:0,0,1,17:0,0,41,663:-21.9761,-54.4873,-403.835,-54.4873,-403.835,-403.835,-51.1022,-400.451,-400.451,-400.15,0,-349.345,-349.345,-345.961,-344.228 0|0:266:245,4,4,0,11:245:9479:4,4,0,11:64,157,0,444:0,-70.312,-847.666,-60.8307,-835.959,-838.242,-73.7523,-848.87,-839.447,-852.358,-37.0919,-812.268,-802.844,-815.756,-812.445 0|0:54:25,3,5,1,20:25:966:3,5,1,20:48,200,41,804:-58.7907,-63.7255,-142.149,-49.8361,-126.577,-127.675,-62.9311,-139.668,-125.795,-141.971,0,-76.7936,-62.9091,-76.0043,-73.3691 dDocent_Contig_9267 11 . T C 707.488 . AB=0.361111;ABP=15.074;AC=2;AF=0.166667;AN=12;AO=27;CIGAR=1X;DP=147;DPB=147;DPRA=2.0625;EPP=61.6401;EPPR=263.587;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.966667;PAO=0;PQA=0;PQR=0;PRO=0;QA=1096;QR=4706;RO=120;RPL=0;RPP=61.6401;RPPR=263.587;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=120;SRP=263.587;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:579:0:0:0,-4.51545,-52.4464 0/1:29:21,8:21:802:8:327:-21.0702,0,-63.7643 0/0:27:26,1:26:1022:1:41:0,-4.03324,-88.1783 0/1:43:25,18:25:976:18:728:-52.9004,0,-75.1971 0/0:6:6,0:6:240:0:0:0,-1.80618,-21.9754 0/0:27:27,0:27:1087:0:0:0,-8.12781,-98.119 dDocent_Contig_9268 122 . A G 68.6833 . AB=0.111111;ABP=38.4777;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=3M1X18M;DP=188;DPB=188.227;DPRA=1.16667;EPP=16.0391;EPPR=374.332;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=6.93889e-18;PAIRED=0.666667;PAIREDR=0.783626;PAO=0;PQA=0;PQR=0;PRO=0;QA=231;QR=6535;RO=171;RPL=0;RPP=16.0391;RPPR=374.332;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=374.332;SRR=171;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:41:35,3,2,0:35:1336:3,2,0:92,75,0:0,-3.2013,-111.899,-4.37861,-106.659,-113.426,-10.536,-112.802,-114.028,-120.171 0|0:24:24,0,0,0:24:914:0,0,0:0,0,0:0,-7.22472,-82.5733,-7.22472,-82.5733,-82.5733,-7.22472,-82.5733,-82.5733,-82.5733 0|1:27:24,0,3,0:24:922:0,3,0:0,117,0:-2.78257,-10.0073,-85.6905,0,-76.0723,-75.1692,-10.0073,-85.6905,-76.0723,-85.6905 0|0:37:34,2,1,0:34:1303:2,1,0:70,39,0:0,-4.56608,-110.899,-7.01588,-108.295,-113.688,-10.235,-111.501,-113.989,-117.195 0|0:23:18,0,0,4:18:692:0,0,4:0,0,155:-7.29582,-12.7144,-69.5203,-12.7144,-69.5203,-69.5203,0,-56.7878,-56.7878,-55.5836 0|0:36:36,0,0,0:36:1368:0,0,0:0,0,0:0,-10.8371,-123.403,-10.8371,-123.403,-123.403,-10.8371,-123.403,-123.403,-123.403 dDocent_Contig_9269 13 . G A 702.633 . AB=0.29;ABP=41.3151;AC=1;AF=0.0833333;AN=12;AO=39;CIGAR=1X;DP=1247;DPB=1247;DPRA=0.71068;EPP=87.6977;EPPR=2626.15;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999172;PAO=0;PQA=0;PQR=0;PRO=0;QA=1533;QR=47713;RO=1208;RPL=0;RPP=87.6977;RPPR=2626.15;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=1208;SRP=2626.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:248:248,0:248:9830:0:0:0,-74.6554,-884.117 0/0:294:293,1:293:11570:1:38:0,-84.7055,-1036.74 0/0:267:267,0:267:10515:0:0:0,-80.375,-945.706 0/0:256:253,3:253:9980:3:123:0,-65.5989,-886.124 0/1:100:71,29:71:2781:29:1129:-71.7862,0,-220.307 0/0:82:76,6:76:3037:6:243:0,-2.43628,-251.161 dDocent_Contig_9270 15 . A T 35.1022 . AB=0.117647;ABP=46.1843;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=188;DPB=188;DPRA=1.1039;EPP=11.6962;EPPR=402.561;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.570652;PAO=0;PQA=0;PQR=0;PRO=0;QA=162;QR=7283;RO=184;RPL=0;RPP=11.6962;RPPR=402.561;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=184;SRP=402.561;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:30,4:30:1198:4:162:-4.73194,0,-97.8651 0/0:43:43,0:43:1704:0:0:0,-12.9443,-153.595 0/0:16:16,0:16:616:0:0:0,-4.81648,-55.772 0/0:33:33,0:33:1309:0:0:0,-9.93399,-118.082 0/0:22:22,0:22:872:0:0:0,-6.62266,-78.7929 0/0:40:40,0:40:1584:0:0:0,-12.0412,-142.806 dDocent_Contig_9271 8 . G A 184.344 . AB=0.134921;ABP=148.878;AC=2;AF=0.166667;AN=12;AO=19;CIGAR=1X;DP=322;DPB=322;DPRA=1.21277;EPP=44.2683;EPPR=656.623;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.916944;PAO=0;PQA=0;PQR=0;PRO=0;QA=731;QR=11460;RO=301;RPL=0;RPP=44.2683;RPPR=656.623;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=301;SRP=656.623;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:27,5:27:1038:5:195:-7.90158,0,-83.7053 0/1:93:81,12:81:3088:12:460:-13.7547,0,-250.081 0/0:45:44,1:44:1655:1:39:0,-9.64978,-145.314 0/0:57:55,1:55:2118:1:37:0,-13.5396,-187.14 0/0:57:57,0:57:2150:0:0:0,-17.1587,-193.728 0/0:37:37,0:37:1411:0:0:0,-11.1381,-127.271 dDocent_Contig_9272 23 . C T 529.22 . AB=0.076087;ABP=146.611;AC=0;AF=0;AN=12;AO=7;CIGAR=11M1X1M;DP=230;DPB=232.231;DPRA=0;EPP=18.2106;EPPR=387.361;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.519774;PAO=0;PQA=0;PQR=0;PRO=0;QA=282;QR=6995;RO=177;RPL=0;RPP=18.2106;RPPR=387.361;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=177;SRP=387.361;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:27:14,0,9,0,4:14:551:0,9,0,4:0,349,0,158:-24.4517,-28.6661,-73.9932,0,-45.3241,-42.6148,-28.6661,-73.9932,-45.3241,-73.9932,-15.662,-60.9907,-32.3218,-60.9907,-59.7866 0|0:44:30,0,1,5,8:30:1198:0,1,5,8:0,40,201,314:-16.7867,-25.8176,-124.493,-22.5222,-121.198,-120.897,-9.25067,-107.929,-104.633,-106.423,0,-98.6713,-95.3762,-82.1071,-96.2631 0|0:26:21,0,4,0,1:21:830:0,4,0,1:0,159,0,41:-6.75922,-13.0809,-81.3778,0,-68.2868,-67.0827,-13.0809,-81.3778,-68.2868,-81.3778,-9.6943,-77.9932,-64.9021,-77.9932,-77.6921 0|0:48:38,0,4,2,4:38:1508:0,4,2,4:0,150,81,162:-1.92713,-13.3663,-137.509,-1.0929,-125.225,-124.021,-6.68413,-130.829,-118.546,-130.227,0,-124.15,-111.866,-117.47,-122.945 0|0:30:24,6,0,0,0:24:944:6,0,0,0:229,0,0,0:-11.9408,0,-76.2358,-19.1655,-78.042,-96.8239,-19.1655,-78.042,-96.8239,-96.8239,-19.1655,-78.042,-96.8239,-96.8239,-96.8239 0|0:55:50,5,0,0,0:50:1964:5,0,0,0:203,0,0,0:-2.0962,0,-160.421,-17.1477,-161.926,-178.669,-17.1477,-161.926,-178.669,-178.669,-17.1477,-161.926,-178.669,-178.669,-178.669 dDocent_Contig_9273 8 . G T 313.758 . AB=0.173913;ABP=109.224;AC=3;AF=0.25;AN=12;AO=22;CIGAR=1X;DP=239;DPB=239;DPRA=0.957317;EPP=50.7827;EPPR=474.22;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.797235;PAO=0;PQA=0;PQR=0;PRO=0;QA=857;QR=8337;RO=217;RPL=0;RPP=50.7827;RPPR=474.22;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=217;SRP=474.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:40,0:40:1536:0:0:0,-12.0412,-138.512 0/0:42:40,2:40:1534:2:78:0,-5.23979,-130.926 0/0:42:42,0:42:1614:0:0:0,-12.6433,-145.523 0/1:38:32,6:32:1235:6:233:-9.90094,0,-100.004 0/1:34:28,6:28:1075:6:234:-11.1961,0,-86.819 0/1:43:35,8:35:1343:8:312:-15.5006,0,-108.209 dDocent_Contig_9274 84 . A G 809.043 . AB=0.188925;ABP=261.048;AC=4;AF=0.333333;AN=12;AO=58;CIGAR=1X;DP=430;DPB=430;DPRA=1.24797;EPP=128.956;EPPR=808.627;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1992;QR=12897;RO=371;RPL=58;RPP=128.956;RPPR=808.627;RPR=0;RUN=1;SAF=58;SAP=128.956;SAR=0;SRF=371;SRP=808.627;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:50:35,15:35:1209:15:519:-31.9853,0,-94.059 0/1:93:82,10:82:2878:10:337:-2.60158,0,-231.204 0/1:65:53,12:53:1874:12:421:-18.6579,0,-149.372 0/1:99:78,21:78:2721:21:715:-34.8636,0,-215.333 0/0:55:55,0:55:1872:0:0:0,-16.5566,-168.753 0/0:68:68,0:68:2343:0:0:0,-20.47,-211.126 dDocent_Contig_9275 29 . T C 38.2126 . AB=0.113636;ABP=60.0608;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=270;DPB=270;DPRA=1.4875;EPP=29.068;EPPR=563.25;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.930233;PAO=0;PQA=0;PQR=0;PRO=0;QA=472;QR=10302;RO=258;RPL=0;RPP=29.068;RPPR=563.25;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=258;SRP=563.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:44:39,5:39:1573:5:199:-5.04304,0,-128.558 0/0:49:48,1:48:1885:1:40:0,-10.7548,-165.853 0/0:33:32,1:32:1294:1:40:0,-5.93831,-112.727 0/0:55:51,4:51:2039:4:157:0,-2.04897,-169.187 0/0:32:32,0:32:1279:0:0:0,-9.63296,-115.372 0/0:57:56,1:56:2232:1:36:0,-13.5604,-197.443 dDocent_Contig_9276 27 . C T 67.0649 . AB=0.108434;ABP=113.546;AC=1;AF=0.0833333;AN=12;AO=28;CIGAR=1X;DP=629;DPB=629;DPRA=0.983491;EPP=63.8115;EPPR=1308.07;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.983361;PAO=0;PQA=0;PQR=0;PRO=0;QA=1134;QR=23886;RO=601;RPL=0;RPP=63.8115;RPPR=1308.07;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=601;SRP=1308.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:113:106,7:106:4152:7:286:0,-7.90157,-347.516 0/0:129:119,10:119:4774:10:405:0,-2.02282,-392.745 0/1:83:74,9:74:2915:9:365:-8.22936,0,-237.448 0/0:92:90,2:90:3603:2:78:0,-20.2913,-316.885 0/0:94:94,0:94:3738:0:0:0,-28.2968,-336.431 0/0:118:118,0:118:4704:0:0:0,-35.5215,-423.264 dDocent_Contig_9277 31 . A T 51.2791 . AB=0.133333;ABP=55.5599;AC=3;AF=0.25;AN=12;AO=6;CIGAR=1X;DP=133;DPB=133;DPRA=0.511364;EPP=16.0391;EPPR=278.787;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.333333;PAIREDR=0.834646;PAO=0;PQA=0;PQR=0;PRO=0;QA=242;QR=5102;RO=127;RPL=0;RPP=16.0391;RPPR=278.787;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=127;SRP=278.787;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:15:13,2:13:529:2:79:-2.98179,0,-43.4414 0/1:20:17,3:17:685:3:122:-5.35189,0,-55.9587 0/0:18:18,0:18:728:0:0:0,-5.41854,-65.8454 0/1:10:9,1:9:365:1:41:-1.08427,0,-30.2042 0/0:27:27,0:27:1072:0:0:0,-8.12781,-96.7686 0/0:43:43,0:43:1723:0:0:0,-12.9443,-155.287 dDocent_Contig_9278 31 . C A 1230.38 . AB=0.0825688;ABP=167.982;AC=4;AF=0.333333;AN=12;AO=9;CIGAR=7M1X1M1X1M;DP=188;DPB=189.182;DPRA=1.17204;EPP=22.5536;EPPR=274.444;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.952;PAO=0;PQA=0;PQR=0;PRO=0;QA=359;QR=4952;RO=125;RPL=0;RPP=22.5536;RPPR=274.444;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=125;SRP=274.444;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:29:16,8,3,0:16:636:8,3,0:321,120,0:-21.6321,0,-49.9509,-16.5638,-42.4737,-68.0206,-26.4486,-52.3592,-68.9236,-78.809 0|0:36:20,3,0,13:20:788:3,0,13:121,0,525:-37.259,-33.3054,-97.2256,-43.2796,-98.1287,-108.103,0,-54.8457,-64.8211,-60.9077 0|1:39:29,5,5,0:29:1151:5,5,0:180,201,0:-7.85524,-1.92385,-95.1642,0,-80.1044,-93.276,-16.5851,-96.6693,-94.7812,-111.347 0|1:41:18,21,1,0:18:711:21,1,0:837,38,0:-63.5106,0,-52.1851,-65.8134,-55.391,-124.017,-68.9291,-58.5067,-124.318,-127.434 0|1:12:11,1,0,0:11:427:1,0,0:40,0,0:-0.383319,0,-35.1694,-3.69465,-35.4704,-38.7664,-3.69465,-35.4704,-38.7664,-38.7664 0|0:31:31,0,0,0:31:1239:0,0,0:0,0,0:0,-9.33193,-111.785,-9.33193,-111.785,-111.785,-9.33193,-111.785,-111.785,-111.785 dDocent_Contig_9280 37 . G A 1221.82 . AB=0.260664;ABP=107.992;AC=6;AF=0.5;AN=12;AO=55;CIGAR=1X;DP=211;DPB=211;DPRA=0;EPP=122.441;EPPR=341.76;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2164;QR=6164;RO=156;RPL=0;RPP=122.441;RPPR=341.76;RPR=55;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=156;SRP=341.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:8:2,6:2:80:6:243:-19.8394,0,-5.18355 0/1:42:33,9:33:1305:9:346:-18.8543,0,-105.076 0/1:42:31,11:31:1253:11:429:-26.3141,0,-100.393 0/1:46:38,8:38:1510:8:315:-14.866,0,-122.299 0/1:42:26,16:26:1012:16:632:-44.5735,0,-78.7306 0/1:31:26,5:26:1004:5:199:-8.95663,0,-81.3292 dDocent_Contig_9281 20 . T A 517.053 . AB=0.171717;ABP=95.6817;AC=6;AF=0.5;AN=12;AO=17;CIGAR=1X1M;DP=155;DPB=155;DPRA=0;EPP=39.9253;EPPR=257.073;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.470588;PAIREDR=0.846154;PAO=0;PQA=0;PQR=0;PRO=0;QA=670;QR=4608;RO=117;RPL=0;RPP=39.9253;RPPR=257.073;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=117;SRP=257.073;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:33:28,5,0:28:1087:5,0:193,0:-7.80602,0,-88.1859,-16.2349,-89.691,-105.54 0|1:17:13,4,0:13:507:4,0:157,0:-9.39078,0,-40.8571,-13.3042,-42.0612,-54.9738 0|1:6:4,2,0:4:156:2,0:80,0:-5.78561,0,-12.6088,-6.98973,-13.2108,-19.8043 0|1:33:18,5,10:18:725:5,10:202,392:-26.8066,-15.5679,-73.822,0,-43.0979,-56.7411 0|1:30:26,3,1:26:1034:3,1:118,41:-1.86701,0,-84.2127,-6.30558,-81.7312,-91.1359 0|1:36:28,2,6:28:1099:2,6:75,237:-11.0879,-13.3797,-103.15,0,-84.2501,-88.5848 dDocent_Contig_9282 18 . T C 38.0232 . AB=0.151515;ABP=37.8197;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X1M1X;DP=178;DPB=178;DPRA=0.825397;EPP=16.0391;EPPR=374.332;GTI=0;LEN=1;MEANALT=1.5;MQM=42;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=224;QR=6786;RO=171;RPL=0;RPP=16.0391;RPPR=374.332;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=171;SRP=374.332;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:19:18,1:18:715:1:40:0,-2.49854,-61.4583 0|1:33:27,5:27:1065:5:184:-5.32513,0,-86.1047 0|0:25:25,0:25:998:0:0:0,-7.52575,-90.1198 0|0:44:44,0:44:1745:0:0:0,-13.2453,-157.282 0|0:27:27,0:27:1068:0:0:0,-8.12781,-96.4128 0|0:30:30,0:30:1195:0:0:0,-9.0309,-107.832 dDocent_Contig_9283 120 . T C 307.373 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=187;DPB=187;DPRA=0.252809;EPP=22.5536;EPPR=389.532;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=329;QR=6297;RO=178;RPL=0;RPP=22.5536;RPPR=389.532;RPR=9;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=389.532;SRR=178;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:9:0,9:0:0:9:329:-29.9591,-2.70927,0 0/0:20:20,0:20:712:0:0:0,-6.0206,-64.404 0/0:9:9,0:9:298:0:0:0,-2.70927,-27.1368 0/0:40:40,0:40:1409:0:0:0,-12.0412,-127.1 0/0:64:64,0:64:2294:0:0:0,-19.2659,-206.711 0/0:45:45,0:45:1584:0:0:0,-13.5463,-142.839 dDocent_Contig_9284 64 . C T 73.523 . AB=0.1875;ABP=30.1537;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=124;DPB=124;DPRA=1.70149;EPP=18.2106;EPPR=257.073;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.940171;PAO=0;PQA=0;PQR=0;PRO=0;QA=239;QR=4112;RO=117;RPL=7;RPP=18.2106;RPPR=257.073;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=117;SRP=257.073;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:11:11,0:11:362:0:0:0,-3.31133,-32.8975 0/0:25:24,1:24:828:1:37:0,-3.82792,-71.1395 0/0:7:7,0:7:246:0:0:0,-2.10721,-22.4794 0/1:32:26,6:26:926:6:202:-8.87517,0,-74.0176 0/0:21:21,0:21:765:0:0:0,-6.32163,-69.1771 0/0:28:28,0:28:985:0:0:0,-8.42884,-88.9572 dDocent_Contig_9286 28 . T C 3728.83 . AB=0.0795455;ABP=138.135;AC=0;AF=0;AN=12;AO=7;CIGAR=6M1X10M;DP=484;DPB=429.176;DPRA=1.39683;EPP=18.2106;EPPR=617.537;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=1;PAIREDR=0.957597;PAO=0;PQA=0;PQR=0;PRO=0;QA=287;QR=10898;RO=283;RPL=0;RPP=18.2106;RPPR=617.537;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=283;SRP=617.537;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:63:58,0,5,0,0,0:58:2225:0,5,0,0,0:0,180,0,0,0:0,-17.4597,-200.091,-2.4172,-185.41,-183.905,-17.4597,-200.091,-185.41,-200.091,-17.4597,-200.091,-185.41,-200.091,-200.091,-17.4597,-200.091,-185.41,-200.091,-200.091,-200.091 0|0:88:43,0,38,0,0,7:43:1627:0,38,0,0,7:0,1409,0,0,287:-102.3,-115.245,-248.605,0,-133.332,-121.893,-115.245,-248.605,-133.332,-248.605,-115.245,-248.605,-133.332,-248.605,-248.605,-91.5501,-224.914,-109.64,-224.914,-224.914,-222.806 0|0:58:39,0,17,1,0,0:39:1518:0,17,1,0,0:0,630,39,0,0:-39.7883,-51.5284,-176.293,0,-124.766,-119.648,-48.3215,-173.087,-121.56,-172.786,-51.5284,-176.293,-124.766,-173.087,-176.293,-51.5284,-176.293,-124.766,-173.087,-176.293,-176.293 0|0:117:66,0,37,9,1,0:66:2531:0,37,9,1,0:0,1357,329,27,0:-91.0289,-110.897,-318.625,0,-207.73,-196.591,-84.0164,-291.745,-180.851,-289.036,-108.77,-316.497,-205.602,-289.617,-316.196,-110.897,-318.625,-207.73,-291.745,-316.497,-318.625 0|0:63:25,13,25,0,0,0:25:980:13,25,0,0,0:510,886,0,0,0:-64.6089,-30.1806,-106.876,0,-38.6488,-73.0642,-72.1346,-110.789,-80.59,-152.735,-72.1346,-110.789,-80.59,-152.735,-152.735,-72.1346,-110.789,-80.59,-152.735,-152.735,-152.735 0|0:95:52,2,33,0,6,0:52:2017:2,33,0,6,0:80,1223,0,234,0:-84.3785,-93.441,-258.553,0,-159.11,-155.766,-100.032,-259.155,-165.7,-265.745,-80.7948,-239.92,-146.465,-246.51,-244.704,-100.032,-259.155,-165.7,-265.745,-246.51,-265.745 dDocent_Contig_9287 21 . T A 52.2589 . AB=0.115385;ABP=69.8248;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=220;DPB=220;DPRA=0.764368;EPP=24.725;EPPR=459.02;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.4;PAIREDR=0.680952;PAO=0;PQA=0;PQR=0;PRO=0;QA=391;QR=8452;RO=210;RPL=0;RPP=24.725;RPPR=459.02;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=210;SRP=459.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:23,2:23:936:2:82:-0.253928,0,-77.015 0/0:41:40,1:40:1592:1:40:0,-8.34655,-139.518 0/1:27:23,4:23:925:4:161:-6.74746,0,-75.4259 0/0:40:37,3:37:1502:3:108:0,-1.96748,-125.343 0/0:55:55,0:55:2215:0:0:0,-16.5566,-199.513 0/0:32:32,0:32:1282:0:0:0,-9.63296,-115.644 dDocent_Contig_9288 16 . C T 633.002 . AB=0.139053;ABP=385.498;AC=2;AF=0.166667;AN=12;AO=47;CIGAR=1X;DP=747;DPB=747;DPRA=1.65281;EPP=105.07;EPPR=1507.84;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1863;QR=27750;RO=693;RPL=0;RPP=105.07;RPPR=1507.84;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=693;SRP=1507.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:97:97,0:97:3909:0:0:0,-29.1999,-351.787 0/0:117:112,0:112:4508:0:0:0,-33.7154,-405.243 0/0:89:87,0:87:3491:0:0:0,-26.1896,-313.811 0/0:106:106,0:106:4240:0:0:0,-31.9092,-381.536 0/1:197:174,23:174:6899:23:922:-23.9778,0,-561.273 0/1:141:117,24:117:4703:24:941:-42.5442,0,-380.718 dDocent_Contig_9289 209 . N G 105.366 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=113;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:113:-10.536,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_9290 29 . A T 155.906 . AB=0.241379;ABP=19.8579;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=190;DPB=190;DPRA=0.900621;EPP=18.2106;EPPR=400.39;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.901639;PAO=0;PQA=0;PQR=0;PRO=0;QA=283;QR=7329;RO=183;RPL=0;RPP=18.2106;RPPR=400.39;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=183;SRP=400.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:943:0:0:0,-7.22472,-85.1606 0/0:14:14,0:14:568:0:0:0,-4.21442,-51.4622 0/0:60:60,0:60:2404:0:0:0,-18.0618,-216.506 0/0:29:29,0:29:1157:0:0:0,-8.72987,-104.404 0/1:29:22,7:22:883:7:283:-17.1135,0,-71.0502 0/0:34:34,0:34:1374:0:0:0,-10.235,-123.911 dDocent_Contig_9291 122 . G A 413.481 . AB=0.16;ABP=228.93;AC=4;AF=0.333333;AN=12;AO=45;CIGAR=1X;DP=446;DPB=446;DPRA=0;EPP=100.727;EPPR=871.599;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1590;QR=13645;RO=400;RPL=0;RPP=100.727;RPPR=871.599;RPR=45;RUN=1;SAF=0;SAP=100.727;SAR=45;SRF=0;SRP=871.599;SRR=400;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:66:63,3:63:2177:3:104:0,-10.1649,-186.5 0/0:155:148,6:148:5065:6:213:0,-27.1842,-436.514 0/1:79:71,8:71:2410:8:279:-1.66669,0,-193.376 0/1:81:72,9:72:2422:9:319:-4.66835,0,-193.854 0/1:9:5,4:5:175:4:144:-10.6043,0,-13.3844 0/1:56:41,15:41:1396:15:531:-31.2648,0,-109.079 dDocent_Contig_9292 7 . A T 396.563 . AB=0.246575;ABP=43.7328;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1X;DP=444;DPB=444;DPRA=1.25275;EPP=44.2683;EPPR=925.886;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.957647;PAO=0;PQA=0;PQR=0;PRO=0;QA=737;QR=16154;RO=425;RPL=0;RPP=44.2683;RPPR=925.886;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=425;SRP=925.886;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:47:47,0:47:1801:0:0:0,-14.1484,-162.341 0/0:98:97,1:97:3683:1:39:0,-25.6044,-327.698 0/1:73:55,18:55:2106:18:698:-41.1791,0,-167.796 0/0:98:98,0:98:3719:0:0:0,-29.5009,-334.823 0/0:68:68,0:68:2559:0:0:0,-20.47,-230.506 0/0:60:60,0:60:2286:0:0:0,-18.0618,-205.96 dDocent_Contig_9293 11 . A C 151.644 . AB=0.191489;ABP=41.8658;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=251;DPB=251;DPRA=0.619355;EPP=29.068;EPPR=521.992;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.916667;PAIREDR=0.76569;PAO=0;PQA=0;PQR=0;PRO=0;QA=473;QR=9594;RO=239;RPL=0;RPP=29.068;RPPR=521.992;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=239;SRP=521.992;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:24,7:24:953:7:281:-16.3295,0,-76.7341 0/0:49:46,3:46:1836:3:121:0,-3.47027,-154.171 0/1:16:14,2:14:561:2:71:-1.92295,0,-46.0147 0/0:39:39,0:39:1576:0:0:0,-11.7402,-142.073 0/0:36:36,0:36:1437:0:0:0,-10.8371,-129.579 0/0:80:80,0:80:3231:0:0:0,-24.0824,-290.84 dDocent_Contig_9294 10 . G A 2070.95 . AB=0.266667;ABP=159.067;AC=6;AF=0.5;AN=12;AO=88;CIGAR=1X;DP=330;DPB=330;DPRA=0;EPP=194.1;EPPR=526.335;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.988636;PAIREDR=0.846473;PAO=0;PQA=0;PQR=0;PRO=0;QA=3508;QR=9631;RO=241;RPL=0;RPP=194.1;RPPR=526.335;RPR=88;RUN=1;SAF=88;SAP=194.1;SAR=0;SRF=241;SRP=526.335;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:46:40,6:40:1596:6:245:-8.58209,0,-130.029 0/1:57:42,15:42:1678:15:599:-37.0896,0,-134.089 0/1:39:22,17:22:890:17:674:-49.2491,0,-68.6665 0/1:65:54,11:54:2156:11:429:-19.3931,0,-174.645 0/1:46:30,15:30:1196:15:609:-41.2017,0,-93.9657 0/1:77:53,24:53:2115:24:952:-62.8018,0,-167.347 dDocent_Contig_9295 125 . C A 213.69 . AB=0.142857;ABP=18.5208;AC=0;AF=0;AN=12;AO=2;CIGAR=1X2M1X2M1X;DP=324;DPB=324;DPRA=0.142857;EPP=7.35324;EPPR=578.45;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0.981132;PAO=0;PQA=0;PQR=0;PRO=0;QA=70;QR=8615;RO=265;RPL=0;RPP=7.35324;RPPR=578.45;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=578.45;SRR=265;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:14:7,2,0,5:7:230:2,0,5:70,0,167:-11.4008,-7.80799,-25.789,-13.508,-26.3911,-32.0893,0,-12.8694,-18.5696,-17.0645 0|0:98:83,0,7,5:83:2725:0,7,5:0,230,178:0,-24.9855,-245.187,-6.3877,-226.6,-224.493,-10.4587,-230.679,-212.092,-229.173 0|0:51:38,0,3,10:38:1251:0,3,10:0,85,301:-12.6449,-24.084,-125.224,-17.3436,-118.482,-117.579,0,-101.158,-94.4172,-98.1479 0|0:86:76,0,0,9:76:2453:0,0,9:0,0,303:-1.91342,-24.7917,-222.631,-24.7917,-222.631,-222.631,0,-198.077,-198.077,-195.368 0|0:16:11,0,1,2:11:351:0,1,2:0,33,70:-2.4321,-5.74343,-34.0418,-3.06224,-31.372,-31.071,0,-28.3401,-25.6696,-27.738 0|0:59:50,0,0,6:50:1605:0,0,6:0,0,205:-1.77374,-16.8252,-146.244,-16.8252,-146.244,-146.244,0,-129.603,-129.603,-127.797 dDocent_Contig_9296 119 . A G 566.109 . AB=0.202797;ABP=112.723;AC=4;AF=0.333333;AN=12;AO=30;CIGAR=1X;DP=252;DPB=252;DPRA=0.945455;EPP=68.1545;EPPR=482.906;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.7;PAIREDR=0.769231;PAO=0;PQA=0;PQR=0;PRO=0;QA=1210;QR=8830;RO=221;RPL=30;RPP=68.1545;RPPR=482.906;RPR=0;RUN=1;SAF=0;SAP=68.1545;SAR=30;SRF=0;SRP=482.906;SRR=221;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:26,8:26:1039:8:320:-18.933,0,-83.5674 0/1:58:47,11:47:1877:11:444:-22.8559,0,-151.683 0/1:18:14,4:14:562:4:162:-9.54842,0,-45.5043 0/1:33:27,6:27:1081:6:245:-12.4955,0,-87.6446 0/0:44:43,0:43:1713:0:0:0,-12.9443,-154.056 0/0:65:64,1:64:2558:1:39:0,-15.6704,-226.465 dDocent_Contig_9298 14 . G A 124.984 . AB=0.104972;ABP=248.339;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X;DP=610;DPB=610;DPRA=1.05387;EPP=50.7827;EPPR=1279.84;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.97619;PAO=0;PQA=0;PQR=0;PRO=0;QA=891;QR=23601;RO=588;RPL=0;RPP=50.7827;RPPR=1279.84;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=588;SRP=1279.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1339:0:0:0,-9.93399,-120.766 0/1:112:101,11:101:4057:11:444:-6.60103,0,-331.385 0/1:69:61,8:61:2435:8:328:-9.11927,0,-198.523 0/0:132:129,3:129:5200:3:119:0,-28.6415,-456.743 0/0:140:140,0:140:5619:0:0:0,-42.1442,-505.51 0/0:124:124,0:124:4951:0:0:0,-37.3277,-445.456 dDocent_Contig_9299 29 . T C 200.495 . AB=0.13253;ABP=100.36;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=10M1X;DP=1031;DPB=1020.36;DPRA=0.896825;EPP=42.0968;EPPR=2133.22;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.998981;PAO=0;PQA=0;PQR=0;PRO=0;QA=729;QR=38529;RO=981;RPL=0;RPP=42.0968;RPPR=2133.22;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=981;SRP=2133.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:23:23,0,0:23:895:0,0:0,0:0,-6.92369,-80.8596,-6.92369,-80.8596,-80.8596 0|0:125:112,13,0:112:4401:13,0:500,0:-7.71498,0,-358.463,-41.4303,-362.376,-403.422 0|0:73:71,0,0:71:2813:0,0:0,0:0,-21.3731,-253.005,-21.3731,-253.005,-253.005 0|1:83:70,0,11:70:2751:0,11:0,444:-15.5564,-36.6285,-262.896,0,-226.294,-222.983 0|0:256:235,0,7:235:9240:0,7:0,285:0,-70.742,-830.776,-47.2222,-807.265,-805.157 0|0:471:470,0,0:470:18429:0,0:0,0:0,-141.484,-1656.94,-141.484,-1656.94,-1656.94 dDocent_Contig_9300 7 . A T 500.904 . AB=0.115108;ABP=181.868;AC=4;AF=0.333333;AN=12;AO=36;CIGAR=1X;DP=806;DPB=806;DPRA=0;EPP=3.25157;EPPR=1672.87;GTI=0;LEN=1;MEANALT=1.16667;MQM=55.4444;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1356;QR=29303;RO=769;RPL=0;RPP=81.1833;RPPR=1672.87;RPR=36;RUN=1;SAF=19;SAP=3.25157;SAR=17;SRF=769;SRP=1672.87;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:33,4:33:1218:4:150:-2.70397,0,-98.7747 1/1:12:0,12:0:0:12:458:-41.5068,-3.61236,0 0/0:47:45,2:45:1731:2:76:0,-6.94305,-148.843 0/1:102:90,12:90:3463:12:439:-9.08735,0,-281.096 0/0:292:289,2:289:11038:2:78:0,-80.5594,-985.625 0/0:316:312,4:312:11853:4:155:0,-80.8231,-1052.02 dDocent_Contig_9301 1 . N G 99.0673 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=100;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:22:-2.19993,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:78:-7.40278,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_9302 79 . C T 86.5862 . AB=0.13253;ABP=100.36;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1X;DP=511;DPB=511;DPRA=1.16409;EPP=44.2683;EPPR=1071.37;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.315789;PAIREDR=0.441057;PAO=0;PQA=0;PQR=0;PRO=0;QA=675;QR=17378;RO=492;RPL=19;RPP=44.2683;RPPR=1071.37;RPR=0;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=492;SRP=1071.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:55:55,0:55:1920:0:0:0,-16.5566,-173.074 0/0:91:91,0:91:3237:0:0:0,-27.3937,-291.552 0/0:82:82,0:82:2929:0:0:0,-24.6845,-263.844 0/0:95:95,0:95:3358:0:0:0,-28.5978,-302.438 0/1:83:72,11:72:2527:11:387:-10.1815,0,-202.698 0/0:105:97,8:97:3407:8:288:0,-5.34074,-280.581 dDocent_Contig_9303 9 . C T 3244.94 . AB=0.116923;ABP=831.524;AC=1;AF=0.0833333;AN=12;AO=76;CIGAR=1X3M1D12M;DP=650;DPB=636.294;DPRA=0;EPP=168.042;EPPR=878.114;GTI=0;LEN=1;MEANALT=4.83333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.947368;PAIREDR=0.985112;PAO=0;PQA=0;PQR=0;PRO=0;QA=2908;QR=15815;RO=403;RPL=0;RPP=168.042;RPPR=878.114;RPR=76;RUN=1;SAF=76;SAP=168.042;SAR=0;SRF=403;SRP=878.114;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:64:43,5,12,3:43:1690:5,12,3:194,437,118:-22.718,-19.7189,-157.237,0,-123.07,-135.397,-25.9539,-149.037,-129.304,-164.073 0|1:90:50,17,13,4:50:1958:17,13,4:651,478,160:-38.3737,0,-155.891,-14.3683,-121.95,-171.457,-40.2429,-147.827,-162.19,-200.046 0|0:93:50,8,30,0:50:1963:8,30,0:312,1176,0:-81.6569,-71.0612,-230.105,0,-135.815,-152.431,-96.7084,-232.513,-161.461,-258.159 0|0:103:78,9,10,3:78:3058:9,10,3:343,381,116:-7.77088,-3.1096,-251.896,0,-223.36,-248.486,-21.7217,-245.078,-241.969,-272.311 0|0:156:106,9,3,37:106:4156:9,3,37:348,121,1465:-88.6664,-91.9953,-431.049,-110.601,-423.783,-451.462,0,-313.184,-331.791,-330.628 0|0:144:76,28,2,37:76:2990:28,2,37:1060,81,1452:-96.5299,-32.5174,-270.045,-112.728,-271.794,-358.086,0,-159.072,-239.285,-234.827 dDocent_Contig_9304 58 . T C 231.184 . AB=0.129032;ABP=188.286;AC=2;AF=0.2;AN=10;AO=20;CIGAR=1X;DP=345;DPB=345;DPRA=1.22368;EPP=46.4397;EPPR=708.739;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=804;QR=13060;RO=325;RPL=20;RPP=46.4397;RPPR=708.739;RPR=0;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=325;SRP=708.739;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:34,0:34:1386:0:0:0,-10.235,-124.988 0/1:109:95,14:95:3830:14:561:-18.0192,0,-311.879 0/0:43:43,0:43:1742:0:0:0,-12.9443,-156.994 0/1:46:40,6:40:1595:6:243:-8.40022,0,-129.938 ./.:.:.:.:.:.:.:. 0/0:113:113,0:113:4507:0:0:0,-34.0164,-405.564 dDocent_Contig_9305 80 . A T 4571.29 . AB=0.056872;ABP=362.888;AC=0;AF=0;AN=12;AO=12;CIGAR=1X1M1X;DP=237;DPB=237;DPRA=1.62308;EPP=29.068;EPPR=131.127;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=416;QR=2095;RO=59;RPL=12;RPP=29.068;RPPR=131.127;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=59;SRP=131.127;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:28:8,5,15:8:288:5,15:176,524:-40.2153,-28.2947,-50.2926,0,-9.17908,-18.9888 0|0:31:15,2,14:15:521:2,14:71,482:-34.6234,-33.3523,-75.1075,0,-36.5628,-38.1345 0|0:87:14,2,71:14:486:2,71:61,2522:-201.336,-200.666,-239.566,0,-34.6591,-18.167 0|0:34:17,2,15:17:616:2,15:72,513:-36.4995,-35.7401,-85.4417,0,-44.4204,-45.7795 0|0:26:0,0,26:0:0:0,26:0,888:-80.2241,-80.2241,-80.2241,-7.82678,-7.82678,0 0|0:31:5,1,25:5:184:1,25:36,917:-73.4524,-72.0204,-86.765,0,-12.116,-7.52637 dDocent_Contig_9306 35 . A T 967.717 . AB=0.227273;ABP=130.93;AC=4;AF=0.333333;AN=12;AO=45;CIGAR=1X;DP=274;DPB=274;DPRA=1.30263;EPP=100.727;EPPR=500.277;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.4;PAIREDR=0.541485;PAO=0;PQA=0;PQR=0;PRO=0;QA=1802;QR=9115;RO=229;RPL=0;RPP=100.727;RPPR=500.277;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=229;SRP=500.277;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:51:37,14:37:1471:14:552:-34.6682,0,-117.288 0/1:62:46,16:46:1821:16:642:-39.4494,0,-145.424 0/1:31:25,6:25:986:6:245:-13.0975,0,-79.7084 0/1:54:45,9:45:1792:9:363:-16.7785,0,-145.231 0/0:28:28,0:28:1133:0:0:0,-8.42884,-102.251 0/0:48:48,0:48:1912:0:0:0,-14.4494,-172.273 dDocent_Contig_9307 24 . A T 47.1422 . AB=0.137931;ABP=36.0317;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=173;DPB=173;DPRA=1.00694;EPP=11.6962;EPPR=369.989;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.426036;PAO=0;PQA=0;PQR=0;PRO=0;QA=162;QR=6765;RO=169;RPL=0;RPP=11.6962;RPPR=369.989;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=169;SRP=369.989;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:926:0:0:0,-6.92369,-83.6422 0/0:45:45,0:45:1812:0:0:0,-13.5463,-163.29 0/0:11:11,0:11:438:0:0:0,-3.31133,-39.7746 0/0:48:48,0:48:1906:0:0:0,-14.4494,-171.741 0/0:17:17,0:17:682:0:0:0,-5.11751,-61.7087 0/1:29:25,4:25:1001:4:162:-6.23709,0,-81.6529 dDocent_Contig_9308 124 . T C 138.582 . AB=0.285714;ABP=11.386;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=141;DPB=141;DPRA=1.0989;EPP=20.3821;EPPR=291.816;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.804511;PAO=0;PQA=0;PQR=0;PRO=0;QA=318;QR=5238;RO=133;RPL=0;RPP=20.3821;RPPR=291.816;RPR=8;RUN=1;SAF=0;SAP=20.3821;SAR=8;SRF=0;SRP=291.816;SRR=133;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:765:0:0:0,-5.71957,-69.1716 0/0:27:27,0:27:1063:0:0:0,-8.12781,-95.9606 0/0:18:18,0:18:705:0:0:0,-5.41854,-63.7698 0/0:27:27,0:27:1074:0:0:0,-8.12781,-96.9479 0/0:29:27,2:27:1046:2:81:0,-1.04414,-86.7508 0/1:21:15,6:15:585:6:237:-15.381,0,-46.6642 dDocent_Contig_9309 11 . C T 514.008 . AB=0.164179;ABP=134.271;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=2X;DP=255;DPB=255;DPRA=0.840816;EPP=52.9542;EPPR=469.877;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=907;QR=8548;RO=215;RPL=0;RPP=52.9542;RPPR=469.877;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=215;SRP=469.877;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:44:33,9,2:33:1319:9,2:359,81:-19.6259,0,-105.928,-22.8796,-101.958,-130.921 0|0:33:25,3,5:25:999:3,5:122,202:-9.12601,-6.58753,-87.9638,0,-72.2128,-80.7716 0|1:32:24,7,1:24:923:7,1:266,41:-14.5563,0,-73.6252,-18.3932,-72.3473,-93.8524 0|0:25:16,3,6:16:619:3,6:120,244:-15.3144,-10.248,-60.1658,0,-40.937,-49.0179 0|0:49:49,0,0:49:1981:0,0:0,0:0,-14.7505,-178.479,-14.7505,-178.479,-178.479 0|0:72:68,1,3:68:2707:1,3:40,123:0,-17.1774,-239.744,-10.3104,-229.892,-232.284 dDocent_Contig_9310 7 . A G 4898.07 . AB=0.634375;ABP=53.1985;AC=6;AF=0.5;AN=12;AO=203;CIGAR=1X;DP=320;DPB=320;DPRA=0;EPP=443.819;EPPR=241.872;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6605;QR=4204;RO=110;RPL=0;RPP=443.819;RPPR=241.872;RPR=203;RUN=1;SAF=203;SAP=443.819;SAR=0;SRF=110;SRP=241.872;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:92:25,64:25:971:64:2097:-162.047,0,-60.7718 0/1:73:25,47:25:936:47:1529:-116.003,0,-62.6752 0/1:18:6,11:6:232:11:327:-24.467,0,-15.9821 0/1:54:16,37:16:615:37:1212:-93.275,0,-39.6088 0/1:27:11,16:11:420:16:503:-37.4313,0,-30.0245 0/1:56:27,28:27:1030:28:937:-67.8055,0,-76.1969 dDocent_Contig_9311 45 . A G 3000.62 . AB=0.354167;ABP=65.0782;AC=4;AF=0.333333;AN=12;AO=121;CIGAR=1X;DP=627;DPB=627;DPRA=0;EPP=265.758;EPPR=1101.78;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.966942;PAIREDR=0.996047;PAO=0;PQA=0;PQR=0;PRO=0;QA=4601;QR=19474;RO=506;RPL=0;RPP=265.758;RPPR=1101.78;RPR=121;RUN=1;SAF=121;SAP=265.758;SAR=0;SRF=506;SRP=1101.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:146:86,60:86:3371:60:2281:-161.504,0,-259.516 0/1:74:57,17:57:2193:17:614:-33.2924,0,-175.286 0/1:60:33,27:33:1262:27:1048:-76.5446,0,-95.7885 0/1:56:41,15:41:1560:15:583:-35.9427,0,-123.782 0/0:146:145,1:145:5590:1:38:0,-40.1531,-499.186 0/0:145:144,1:144:5498:1:37:0,-39.9515,-491.022 dDocent_Contig_9312 8 . G A 67.4836 . AB=0.155556;ABP=49.3833;AC=3;AF=0.25;AN=12;AO=9;CIGAR=1X;DP=154;DPB=154;DPRA=0.331034;EPP=22.5536;EPPR=315.702;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.111111;PAIREDR=0.444444;PAO=0;PQA=0;PQR=0;PRO=0;QA=341;QR=5475;RO=144;RPL=0;RPP=22.5536;RPPR=315.702;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=144;SRP=315.702;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:11:9,2:9:343:2:76:-3.90334,0,-27.9152 0/1:18:16,2:16:615:2:78:-1.98493,0,-50.271 0/1:16:13,3:13:489:3:116:-6.00122,0,-39.5356 0/0:34:33,1:33:1257:1:32:0,-7.03571,-110.222 0/0:17:15,1:15:567:1:39:0,-1.30957,-47.4698 0/0:58:58,0:58:2204:0:0:0,-17.4597,-198.586 dDocent_Contig_9313 99 . N C 972.548 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=31;CIGAR=9X;DP=31;DPB=31;DPRA=0;EPP=70.3259;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0.0645161;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1059;QR=0;RO=0;RPL=0;RPP=70.3259;RPPR=0;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:10:0,10:0:0:10:342:-31.1112,-3.0103,0 1|1:9:0,9:0:0:9:301:-27.4154,-2.70927,0 1|1:2:0,2:0:0:2:71:-6.74206,-0.60206,0 1|1:10:0,10:0:0:10:345:-31.3837,-3.0103,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_9314 30 . T G 3536.54 . AB=0.432526;ABP=14.4387;AC=6;AF=0.5;AN=12;AO=125;CIGAR=1X;DP=289;DPB=289;DPRA=0;EPP=274.444;EPPR=359.132;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.968;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5000;QR=6563;RO=164;RPL=0;RPP=274.444;RPPR=359.132;RPR=125;RUN=1;SAF=125;SAP=274.444;SAR=0;SRF=164;SRP=359.132;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:25,6:25:1002:6:242:-12.825,0,-81.1438 0/1:40:26,14:26:1019:14:562:-38.8768,0,-79.9582 0/1:24:18,6:18:726:6:242:-14.9326,0,-58.4399 0/1:41:30,11:30:1212:11:440:-27.6123,0,-97.0096 0/1:63:17,46:17:671:46:1823:-145.311,0,-41.749 0/1:90:48,42:48:1933:42:1691:-125.317,0,-147.068 dDocent_Contig_9315 16 . A T 273.14 . AB=0.170455;ABP=86.0198;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=447;DPB=447;DPRA=1.22563;EPP=35.5824;EPPR=932.421;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997685;PAO=0;PQA=0;PQR=0;PRO=0;QA=611;QR=16882;RO=432;RPL=0;RPP=35.5824;RPPR=941.086;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=431;SRP=932.421;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:64:64,0:64:2511:0:0:0,-19.2659,-226.137 0/0:159:159,0:159:6189:0:0:0,-47.8638,-556.814 0/0:74:74,0:74:2887:0:0:0,-22.2762,-259.934 0/1:88:73,15:73:2842:15:611:-28.8368,0,-229.413 0/0:33:33,0:33:1300:0:0:0,-9.93399,-117.27 0/0:29:29,0:29:1153:0:0:0,-8.72987,-104.044 dDocent_Contig_9316 98 . N G 239.794 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=249;QR=0;RO=0;RPL=8;RPP=20.3821;RPPR=0;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:149:-13.7044,-1.50515,0 1/1:2:0,2:0:0:2:65:-6.17345,-0.60206,0 dDocent_Contig_9317 129 . G A 401.368 . AB=0.222222;ABP=63.329;AC=2;AF=0.166667;AN=12;AO=21;CIGAR=1X;DP=275;DPB=275;DPRA=0.774194;EPP=48.6112;EPPR=554.564;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=816;QR=9702;RO=254;RPL=0;RPP=48.6112;RPPR=554.564;RPR=21;RUN=1;SAF=0;SAP=48.6112;SAR=21;SRF=0;SRP=554.564;SRR=254;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:3:3,0:3:94:0:0:0,-0.90309,-8.76824 0/0:30:29,1:29:1117:1:41:0,-4.93633,-96.7154 0/1:49:36,13:36:1390:13:497:-30.3122,0,-110.602 0/1:41:34,7:34:1295:7:278:-13.0463,0,-104.472 0/0:81:81,0:81:3146:0:0:0,-24.3834,-283.213 0/0:71:71,0:71:2660:0:0:0,-21.3731,-239.521 dDocent_Contig_9318 20 . C A 1009.59 . AB=0.125;ABP=159.356;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X2M1X8M;DP=199;DPB=163.75;DPRA=11.6364;EPP=37.7539;EPPR=296.159;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=622;QR=5299;RO=135;RPL=0;RPP=37.7539;RPPR=296.159;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=135;SRP=296.159;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:26:14,0,12:14:559:0,12:0,451:-33.1051,-37.3195,-83.3731,0,-46.4399,-42.8276 0|0:34:29,0,5:29:1135:0,5:0,195:-7.68854,-16.4184,-109.736,0,-93.7074,-92.2023 0|0:91:54,11,25:54:2116:11,25:422,921:-59.0208,-40.6352,-211.333,0,-139.364,-166.474 0|1:37:27,5,5:27:1060:5,5:200,183:-8.3643,0,-85.6949,-1.55581,-72.251,-87.2222 0|0:7:7,0,0:7:268:0,0:0,0:0,-2.10721,-24.4789,-2.10721,-24.4789,-24.4789 0|0:4:4,0,0:4:161:0,0:0,0:0,-1.20412,-14.8755,-1.20412,-14.8755,-14.8755 dDocent_Contig_9319 1 . N G 113.816 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=115;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_9320 49 . C G 37.1966 . AB=0.125;ABP=42.0968;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=116;DPB=116;DPRA=1.41176;EPP=13.8677;EPPR=244.044;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0;PAIREDR=0.612613;PAO=0;PQA=0;PQR=0;PRO=0;QA=202;QR=4467;RO=111;RPL=0;RPP=13.8677;RPPR=244.044;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=111;SRP=244.044;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:875:0:0:0,-6.62266,-79.0571 0/1:32:28,4:28:1133:4:161:-5.24231,0,-92.617 0/0:26:26,0:26:1051:0:0:0,-7.82678,-94.8754 0/0:16:15,1:15:607:1:41:0,-0.721913,-50.8732 0/0:9:9,0:9:361:0:0:0,-2.70927,-32.853 0/0:11:11,0:11:440:0:0:0,-3.31133,-39.9556 dDocent_Contig_9321 16 . T A 2980.28 . AB=0.339233;ABP=79.1143;AC=2;AF=0.166667;AN=12;AO=122;CIGAR=1X;DP=1079;DPB=1079;DPRA=1.09615;EPP=267.93;EPPR=2076.77;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.991623;PAO=0;PQA=0;PQR=0;PRO=0;QA=4754;QR=32903;RO=955;RPL=0;RPP=267.93;RPPR=2076.77;RPR=122;RUN=1;SAF=122;SAP=267.93;SAR=0;SRF=955;SRP=2076.77;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:201:201,0:201:6839:0:0:0,-60.507,-615.533 0/0:189:186,3:186:6286:3:119:0,-45.7993,-554.731 0/0:137:137,0:137:4818:0:0:0,-41.2411,-433.737 0/0:213:207,4:207:7190:4:158:0,-49.1158,-632.598 0/1:159:65,94:65:2254:94:3672:-282.668,0,-155.225 0/1:180:159,21:159:5516:21:805:-18.5825,0,-442.309 dDocent_Contig_9322 23 . T G 6525.32 . AB=0.406632;ABP=46.3981;AC=6;AF=0.5;AN=12;AO=233;CIGAR=1X;DP=573;DPB=573;DPRA=0;EPP=508.963;EPPR=741.311;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.858369;PAIREDR=0.938235;PAO=0;PQA=0;PQR=0;PRO=0;QA=9276;QR=13728;RO=340;RPL=0;RPP=508.963;RPPR=741.311;RPR=233;RUN=1;SAF=233;SAP=508.963;SAR=0;SRF=340;SRP=741.311;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:72:34,38:34:1369:38:1475:-111.314,0,-101.787 0/1:158:108,50:108:4379:50:1975:-130.373,0,-346.466 0/1:124:88,36:88:3540:36:1455:-93.8651,0,-281.288 0/1:94:62,32:62:2508:32:1289:-87.9794,0,-197.549 0/1:53:25,28:25:1005:28:1119:-85.0345,0,-74.7897 0/1:72:23,49:23:927:49:1963:-155.187,0,-62.0568 dDocent_Contig_9323 8 . G A 459.885 . AB=0.176471;ABP=157.568;AC=3;AF=0.25;AN=12;AO=36;CIGAR=1X;DP=395;DPB=395;DPRA=0.812821;EPP=81.1833;EPPR=782.569;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=0.83844;PAO=0;PQA=0;PQR=0;PRO=0;QA=1358;QR=13746;RO=359;RPL=0;RPP=81.1833;RPPR=782.569;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=359;SRP=782.569;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:41,13:41:1569:13:496:-28.7309,0,-125.224 0/1:77:69,8:69:2616:8:306:-4.72115,0,-212.453 0/1:39:30,9:30:1128:9:324:-17.7582,0,-90.0776 0/0:72:67,5:67:2572:5:193:0,-3.9328,-213.934 0/0:75:74,1:74:2857:1:39:0,-18.6807,-253.406 0/0:78:78,0:78:3004:0:0:0,-23.4803,-270.521 dDocent_Contig_9324 30 . G A 5230.35 . AB=0.488372;ABP=3.41429;AC=8;AF=0.666667;AN=12;AO=168;CIGAR=1X3M;DP=344;DPB=344;DPRA=0;EPP=367.818;EPPR=259.244;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.321429;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6582;QR=4546;RO=118;RPL=0;RPP=367.818;RPPR=259.244;RPR=168;RUN=1;SAF=168;SAP=367.818;SAR=0;SRF=118;SRP=259.244;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:42:20,7,15:20:777:7,15:271,594:-42.8706,-26.6317,-88.3659,0,-41.5847,-59.3312 0|1:76:34,9,31:34:1321:9,31:343,1236:-91.559,-73.6627,-179.497,0,-80.4183,-99.2198 0|1:56:26,7,23:26:975:7,23:273,925:-68.4097,-53.8,-131.529,0,-57.3964,-72.9151 0|1:54:14,1,39:14:551:1,39:40,1516:-120.321,-121.24,-166.268,0,-42.026,-33.5814 1|1:50:12,16,22:12:468:16,22:632,841:-78.9102,-30.5118,-64.1647,-13.5438,0,-45.3856 1|1:66:12,16,38:12:454:16,38:635,1470:-132.185,-83.5226,-115.916,-15.0788,0,-40.8437 dDocent_Contig_9325 53 . T C 5152.34 . AB=0.360806;ABP=94.8962;AC=5;AF=0.5;AN=10;AO=197;CIGAR=1X;DP=546;DPB=546;DPRA=0;EPP=430.79;EPPR=758.683;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7638;QR=13254;RO=348;RPL=197;RPP=430.79;RPPR=758.683;RPR=0;RUN=1;SAF=197;SAP=430.79;SAR=0;SRF=348;SRP=758.683;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:140:90,50:90:3396:50:1943:-132.944,0,-263.63 0/1:138:79,59:79:3005:59:2260:-162.039,0,-229.076 0/1:113:82,31:82:3248:31:1230:-76.9608,0,-258.371 0/1:136:91,44:91:3372:44:1694:-111.978,0,-262.901 ./.:.:.:.:.:.:.:. 0/1:19:6,13:6:233:13:511:-40.6134,0,-15.6205 dDocent_Contig_9326 16 . T G 4235.14 . AB=0.0342466;ABP=1378.47;AC=0;AF=0;AN=12;AO=25;CIGAR=1X2M1X3M1X3M;DP=869;DPB=869.091;DPRA=0;EPP=57.2971;EPPR=1058.35;GTI=0;LEN=1;MEANALT=10.6;MQM=50.8;MQMR=58.3621;NS=6;NUMALT=4;ODDS=2.22045e-16;PAIRED=0;PAIREDR=0.240741;PAO=0;PQA=0;PQR=0;PRO=0;QA=973;QR=19135;RO=486;RPL=0;RPP=57.2971;RPPR=1058.35;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=486;SRP=1058.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:142:80,1,3,3,35:80:3151:1,3,3,35:40,121,121,1372:-88.5718,-109.374,-366.909,-102.709,-357.266,-359.643,-102.679,-357.236,-350.572,-359.613,0,-254.569,-247.905,-247.874,-247.313 0|0:208:89,14,8,17,49:89:3509:14,8,17,49:545,304,671,1958:-134.492,-117.194,-400.718,-136.461,-380.11,-421.791,-106.089,-349.739,-369.006,-388.711,0,-243.655,-262.922,-232.551,-272.994 0|0:125:78,6,1,8,20:78:3083:6,1,8,20:234,39,322,784:-40.6081,-44.9309,-296.426,-60.8945,-295.039,-313.894,-37.5995,-271.748,-287.71,-288.495,0,-234.153,-250.115,-226.823,-247.288 0|0:130:80,3,5,6,26:80:3137:3,5,6,26:118,200,227,1012:-59.0869,-73.7152,-330.692,-66.7075,-315.135,-323.083,-64.5679,-312.993,-305.987,-320.641,0,-248.433,-241.426,-239.285,-250.06 0|0:139:80,0,13,10,31:80:3143:0,13,10,31:0,520,387,1241:-77.9948,-102.077,-358.727,-59.3653,-316.016,-312.102,-70.316,-326.965,-284.253,-323.954,0,-256.652,-213.94,-224.889,-247.32 0|0:125:79,1,0,18,16:79:3112:1,0,18,16:36,0,703,639:-33.9818,-54.8823,-305.705,-57.7632,-306.006,-308.887,0,-248.25,-251.131,-245.712,-5.12129,-253.373,-256.254,-198.497,-251.438 dDocent_Contig_9327 23 . G T 55.7228 . AB=0.119048;ABP=55.9529;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=2M1X;DP=269;DPB=281;DPRA=0.92511;EPP=13.8677;EPPR=556.736;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.45098;PAO=0;PQA=0;PQR=0;PRO=0;QA=199;QR=10053;RO=255;RPL=0;RPP=13.8677;RPPR=556.736;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=255;SRP=556.736;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:47:47,0,0:47:1864:0,0:0,0:0,-14.1484,-167.98,-14.1484,-167.98,-167.98 0|1:42:31,6,5:31:1226:6,5:189,199:-7.0913,-1.27225,-100.352,0,-85.7726,-99.4505 0|0:42:42,0,0:42:1646:0,0:0,0:0,-12.6433,-148.381,-12.6433,-148.381,-148.381 0|0:31:29,2,0:29:1144:2,0:72,0:0,-2.49529,-96.4095,-8.72987,-97.0115,-102.884 0|0:39:39,0,0:39:1546:0,0:0,0:0,-11.7402,-139.389,-11.7402,-139.389,-139.389 0|0:68:67,1,0:67:2627:1,0:37,0:0,-16.7722,-232.883,-20.169,-233.184,-236.211 dDocent_Contig_9328 26 . C T 937.716 . AB=0.0638298;ABP=468.999;AC=0;AF=0;AN=12;AO=18;CIGAR=7M1X2M;DP=1062;DPB=991.5;DPRA=0.180769;EPP=42.0968;EPPR=2037.68;GTI=0;LEN=1;MEANALT=2.75;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0.814301;PAO=0;PQA=0;PQR=0;PRO=0;QA=733;QR=36746;RO=937;RPL=0;RPP=42.0968;RPPR=2037.68;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=937;SRP=2037.68;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:50:38,4,7,1:38:1497:4,7,1:159,224,41:-6.54501,-4.87133,-126.873,0,-110.058,-121.042,-14.5949,-124.693,-119.764,-137.484 0|0:71:54,10,0,6:54:2109:10,0,6:369,0,244:-13.8997,0,-170.348,-30.1553,-173.358,-203.531,-10.0163,-153.23,-183.403,-181.597 0|0:45:30,11,0,4:30:1188:11,0,4:437,0,164:-26.9371,0,-94.4547,-35.968,-97.7661,-133.743,-22.4283,-84.2281,-120.206,-119.002 0|0:116:81,27,0,7:81:3199:27,0,7:958,0,284:-53.6116,0,-255.094,-77.995,-263.222,-341.243,-54.5637,-239.8,-317.821,-315.713 0|0:340:323,14,0,0:323:12695:14,0,0:535,0,0:0,-53.28,-1093.33,-97.2327,-1097.54,-1141.43,-97.2327,-1097.54,-1141.43,-1141.43 0|0:440:411,23,0,0:411:16058:23,0,0:845,0,0:0,-54.6165,-1367.86,-123.723,-1374.78,-1443.85,-123.723,-1374.78,-1443.85,-1443.85 dDocent_Contig_9329 51 . A G 252.846 . AB=0.104803;ABP=313.664;AC=3;AF=0.25;AN=12;AO=30;CIGAR=1X1M;DP=379;DPB=379;DPRA=0;EPP=68.1545;EPPR=719.596;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0.924242;PAO=0;PQA=0;PQR=0;PRO=0;QA=1191;QR=12706;RO=330;RPL=30;RPP=68.1545;RPPR=719.596;RPR=0;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=330;SRP=719.596;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:76:65,0,4,7:65:2506:0,4,7:0,158,274:-2.95896,-22.5259,-228.295,-9.52396,-215.294,-214.09,0,-205.767,-192.765,-203.659 0|0:53:49,3,0,1:49:1885:3,0,1:107,0,40:0,-6.06154,-159.894,-14.7505,-160.797,-169.517,-11.4446,-157.502,-166.222,-165.921 0|0:97:88,4,0,5:88:3389:4,0,5:158,0,197:0,-13.4883,-290.511,-26.4906,-291.715,-304.718,-10.2841,-275.508,-288.51,-287.005 0|0:55:45,3,5,2:45:1737:3,5,2:103,204,81:-3.30495,-8.50915,-150.23,0,-134.3,-141.153,-10.1679,-144.454,-135.979,-152.21 0|1:58:53,0,0,5:53:2029:0,0,5:0,0,200:-0.920385,-16.875,-183.348,-16.875,-183.348,-183.348,0,-166.871,-166.871,-165.366 0|1:40:30,0,0,10:30:1160:0,0,10:0,0,399:-24.2253,-33.2562,-128.52,-33.2562,-128.52,-128.52,0,-95.6588,-95.6588,-92.6485 dDocent_Contig_9330 59 . A C 1115.59 . AB=0.111111;ABP=38.4777;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=5M1X1M;DP=172;DPB=178.429;DPRA=1.38462;EPP=9.52472;EPPR=270.101;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.747967;PAO=0;PQA=0;PQR=0;PRO=0;QA=119;QR=4826;RO=123;RPL=3;RPP=9.52472;RPPR=270.101;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=123;SRP=270.101;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:16:11,5,0:11:438:5,0:199,0:-13.4722,0,-34.9599,-16.7836,-36.465,-52.851 0|1:27:24,0,3:24:941:0,3:0,119:-2.9672,-10.1919,-87.5685,0,-77.7724,-76.8693 0|0:34:28,5,0:28:1106:5,0:201,0:-8.12839,0,-89.4902,-16.5572,-90.9953,-107.56 0|0:56:23,33,0:23:892:33,0:1231,0:-94.2046,0,-63.7364,-101.128,-73.6704,-174.417 0|0:26:24,2,0:24:937:2,0:77,0:0,-0.51858,-77.3333,-7.22472,-77.9354,-84.2565 0|0:13:13,0,0:13:512:0,0:0,0:0,-3.91339,-46.4265,-3.91339,-46.4265,-46.4265 dDocent_Contig_9331 11 . C T 85.9773 . AB=0.137931;ABP=69.053;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=223;DPB=223;DPRA=0.70303;EPP=20.3821;EPPR=469.877;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.25;PAIREDR=0.586047;PAO=0;PQA=0;PQR=0;PRO=0;QA=312;QR=8612;RO=215;RPL=0;RPP=20.3821;RPPR=469.877;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=215;SRP=469.877;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:1020:0:0:0,-7.82678,-92.0932 0/1:37:31,6:31:1256:6:232:-10.1073,0,-102.169 0/1:21:19,2:19:750:2:80:-1.26995,0,-61.4904 0/0:44:44,0:44:1774:0:0:0,-13.2453,-159.874 0/0:42:42,0:42:1672:0:0:0,-12.6433,-150.702 0/0:53:53,0:53:2140:0:0:0,-15.9546,-192.77 dDocent_Contig_9332 24 . G A 4534.26 . AB=0.62605;ABP=35.8561;AC=6;AF=0.5;AN=12;AO=149;CIGAR=1X;DP=238;DPB=238;DPRA=0;EPP=326.56;EPPR=196.271;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.503356;PAIREDR=0.573034;PAO=0;PQA=0;PQR=0;PRO=0;QA=5939;QR=3484;RO=89;RPL=0;RPP=326.56;RPPR=196.271;RPR=149;RUN=1;SAF=149;SAP=326.56;SAR=0;SRF=89;SRP=196.271;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:43:24,19:24:945:19:742:-54.1586,0,-72.4089 0/1:43:19,24:19:712:24:975:-75.1023,0,-51.4525 0/1:15:13,2:13:503:2:79:-2.98218,0,-41.0958 0/1:36:19,17:19:760:17:675:-50.2409,0,-57.8831 0/1:52:9,43:9:360:43:1703:-137.839,0,-17.1096 0/1:49:5,44:5:204:44:1765:-144.316,0,-3.99356 dDocent_Contig_9333 175 . T A 146.135 . AB=0.175;ABP=39.7082;AC=4;AF=0.333333;AN=12;AO=11;CIGAR=1X;DP=199;DPB=199;DPRA=0.826667;EPP=26.8965;EPPR=411.247;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=431;QR=7416;RO=188;RPL=11;RPP=26.8965;RPPR=411.247;RPR=0;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=411.247;SRR=188;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:40:-3.99568,-0.30103,0 0/1:11:9,2:9:358:2:80:-4.28046,0,-29.2693 0/0:10:10,0:10:392:0:0:0,-3.0103,-35.6343 0/1:29:24,5:24:950:5:199:-9.55849,0,-77.0743 0/0:65:65,0:65:2541:0:0:0,-19.5669,-228.827 0/0:83:80,3:80:3175:3:112:0,-14.5403,-275.381 dDocent_Contig_9334 22 . T C 60.6548 . AB=0.122449;ABP=63.6786;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=362;DPB=362;DPRA=1.02235;EPP=24.725;EPPR=767.369;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.963068;PAO=0;PQA=0;PQR=0;PRO=0;QA=398;QR=14066;RO=352;RPL=0;RPP=24.725;RPPR=767.369;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=352;SRP=767.369;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:19,1:19:731:1:38:0,-2.22333,-62.3039 0/1:49:43,6:43:1719:6:244:-7.58836,0,-140.176 0/0:22:22,0:22:883:0:0:0,-6.62266,-79.7759 0/0:51:51,0:51:2052:0:0:0,-15.3525,-184.861 0/0:106:106,0:106:4229:0:0:0,-31.9092,-380.566 0/0:114:111,3:111:4452:3:116:0,-23.5004,-389.788 dDocent_Contig_9335 7 . A G 101.075 . AB=0.135802;ABP=189.65;AC=1;AF=0.0833333;AN=12;AO=53;CIGAR=1X;DP=867;DPB=867;DPRA=0.690934;EPP=118.098;EPPR=1766.25;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=58.0887;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.929803;PAO=0;PQA=0;PQR=0;PRO=0;QA=1614;QR=30906;RO=812;RPL=0;RPP=118.098;RPPR=1766.25;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=812;SRP=1766.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:108:98,10:98:3722:10:310:0,-4.30748,-304.667 0/0:122:112,10:112:4279:10:301:0,-9.34992,-352.889 0/1:162:139,22:139:5292:22:666:-11.6304,0,-421.821 0/0:111:99,11:99:3784:11:337:0,-2.61601,-299.472 0/0:151:151,0:151:5729:0:0:0,-45.4555,-510.309 0/0:213:213,0:213:8100:0:0:0,-64.1194,-721.776 dDocent_Contig_9336 63 . C A 321.59 . AB=0.223684;ABP=53.4113;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=505;DPB=505;DPRA=0.531328;EPP=42.0968;EPPR=1058.35;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=632;QR=19196;RO=486;RPL=18;RPP=42.0968;RPPR=1058.35;RPR=0;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=486;SRP=1058.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:154:153,0:153:6009:0:0:0,-46.0576,-540.193 0/0:165:165,0:165:6517:0:0:0,-49.6699,-586.286 0/1:76:59,17:59:2341:17:625:-33.6819,0,-187.98 0/0:76:76,0:76:3026:0:0:0,-22.8783,-272.424 0/0:30:29,1:29:1140:1:7:0,-8.3309,-102.183 0/0:4:4,0:4:163:0:0:0,-1.20412,-15.0584 dDocent_Contig_9337 78 . A G 40.8454 . AB=0.176471;ABP=18.4661;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=342;DPB=342;DPRA=0.261538;EPP=9.52472;EPPR=739.139;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.858407;PAO=0;PQA=0;PQR=0;PRO=0;QA=115;QR=12464;RO=339;RPL=2;RPP=3.73412;RPPR=4.09283;RPR=1;RUN=1;SAF=2;SAP=3.73412;SAR=1;SRF=163;SRP=4.09283;SRR=176;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:63:63,0:63:2299:0:0:0,-18.9649,-207.161 0/0:56:56,0:56:1999:0:0:0,-16.8577,-180.167 0/1:17:14,3:14:528:3:115:-5.60738,0,-42.7458 0/0:66:66,0:66:2476:0:0:0,-19.868,-223.061 0/0:67:67,0:67:2416:0:0:0,-20.169,-217.679 0/0:73:73,0:73:2746:0:0:0,-21.9752,-247.346 dDocent_Contig_9338 75 . A C 4419.4 . AB=0.6;ABP=16.4734;AC=5;AF=0.416667;AN=12;AO=152;CIGAR=1X;DP=695;DPB=695;DPRA=0.272789;EPP=333.074;EPPR=1179.95;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5635;QR=19833;RO=542;RPL=152;RPP=333.074;RPPR=1179.95;RPR=0;RUN=1;SAF=152;SAP=333.074;SAR=0;SRF=542;SRP=1179.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:6,31:6:211:31:1155:-93.1049,0,-8.19161 1/1:59:2,57:2:78:57:2096:-181.457,-10.3573,0 0/1:45:29,16:29:1060:16:608:-41.5086,0,-82.1475 0/1:73:27,46:27:1015:46:1698:-131.092,0,-69.686 0/0:294:294,0:294:10744:0:0:0,-88.5028,-966.691 0/0:187:184,2:184:6725:2:78:0,-48.8513,-597.864 dDocent_Contig_9339 95 . A T 232.584 . AB=0.195652;ABP=77.0292;AC=3;AF=0.25;AN=12;AO=18;CIGAR=1X;DP=157;DPB=157;DPRA=1.41538;EPP=42.0968;EPPR=304.845;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.647482;PAO=0;PQA=0;PQR=0;PRO=0;QA=608;QR=4764;RO=139;RPL=18;RPP=42.0968;RPPR=304.845;RPR=0;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=139;SRP=304.845;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:782:0:0:0,-6.92369,-70.6955 0/1:27:24,3:24:825:3:104:-1.57528,0,-66.4393 0/1:16:11,5:11:366:5:173:-11.0937,0,-28.4452 0/1:49:39,10:39:1342:10:331:-15.3601,0,-106.33 0/0:20:20,0:20:689:0:0:0,-6.0206,-62.3318 0/0:22:22,0:22:760:0:0:0,-6.62266,-68.7201 dDocent_Contig_9340 1 . N G 14595.6 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=554;CIGAR=1X;DP=554;DPB=554;DPRA=0;EPP=1206.01;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=36.2816;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=18591;QR=0;RO=0;RPL=0;RPP=1206.01;RPPR=0;RPR=554;RUN=1;SAF=0;SAP=1206.01;SAR=554;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:59:0,59:0:0:59:1984:-160.498,-17.7608,0 1/1:120:0,120:0:0:120:3967:-310.56,-36.1236,0 1/1:96:0,96:0:0:96:3256:-242.286,-28.8989,0 1/1:95:0,95:0:0:95:3159:-246.126,-28.5979,0 1/1:100:0,100:0:0:100:3393:-278.552,-30.103,0 1/1:84:0,84:0:0:84:2832:-220.76,-25.2865,0 dDocent_Contig_9342 35 . A G 1123.68 . AB=0.230563;ABP=238.21;AC=6;AF=0.5;AN=12;AO=86;CIGAR=1X;DP=373;DPB=373;DPRA=0;EPP=181.172;EPPR=626.223;GTI=0;LEN=1;MEANALT=1;MQM=33.1279;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0116279;PAIREDR=0.491289;PAO=0;PQA=0;PQR=0;PRO=0;QA=2941;QR=10868;RO=287;RPL=0;RPP=189.757;RPPR=626.223;RPR=86;RUN=1;SAF=1;SAP=181.172;SAR=85;SRF=287;SRP=626.223;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:38,16:38:1444:16:553:-28.4411,0,-113.967 0/1:66:49,17:49:1827:17:571:-25.475,0,-144.792 0/1:66:46,20:46:1756:20:689:-34.8476,0,-138.404 0/1:82:69,13:69:2652:13:449:-10.6044,0,-214.161 0/1:56:44,12:44:1678:12:401:-16.0962,0,-134.402 0/1:49:41,8:41:1511:8:278:-8.12537,0,-121.477 dDocent_Contig_9343 15 . C T 134.122 . AB=0.2;ABP=34.2795;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=309;DPB=309;DPRA=0.743494;EPP=20.3821;EPPR=656.623;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.980066;PAO=0;PQA=0;PQR=0;PRO=0;QA=296;QR=11930;RO=301;RPL=0;RPP=20.3821;RPPR=656.623;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=301;SRP=656.623;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:69:69,0:69:2733:0:0:0,-20.7711,-246.078 0/0:65:65,0:65:2578:0:0:0,-19.5669,-232.162 0/0:31:31,0:31:1221:0:0:0,-9.33193,-110.167 0/1:40:32,8:32:1267:8:296:-14.9351,0,-102.259 0/0:74:74,0:74:2939:0:0:0,-22.2762,-264.611 0/0:30:30,0:30:1192:0:0:0,-9.0309,-107.558 dDocent_Contig_9344 10 . G A 1406.26 . AB=0.0541176;ABP=2204.75;AC=4;AF=0.333333;AN=12;AO=111;CIGAR=3M1X;DP=2040;DPB=1998;DPRA=0;EPP=244.044;EPPR=3757.49;GTI=0;LEN=1;MEANALT=3.66667;MQM=60;MQMR=59.9543;NS=6;NUMALT=2;ODDS=0;PAIRED=0.756757;PAIREDR=0.890688;PAO=0;PQA=0;PQR=0;PRO=0;QA=4365;QR=65394;RO=1729;RPL=0;RPP=244.044;RPPR=3757.49;RPR=111;RUN=1;SAF=111;SAP=244.044;SAR=0;SRF=1729;SRP=3757.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:242:217,16,9:217:8191:16,9:618,340:0,-17.5165,-684.023,-37.4637,-660.984,-706.089 0|1:353:288,54,7:288:10897:54,7:2037,282:-70.426,0,-876.994,-133.875,-870.006,-1025.05 0|1:189:162,20,7:162:6133:20,7:761,277:-6.53236,0,-496.165,-32.4884,-479.388,-532.617 0|1:245:189,34,10:189:7175:34,10:1307,405:-47.3271,0,-578.138,-70.8193,-554.976,-656.186 0|0:523:467,21,33:467:17613:21,33:805,1289:0,-74.6299,-1511.71,-34.6194,-1412.08,-1468.1 0|1:488:406,23,45:406:15385:23,45:871,1772:-23.5621,-77.9,-1332.08,0,-1193.23,-1247.58 dDocent_Contig_9345 19 . G A 627.924 . AB=0.140625;ABP=361.982;AC=2;AF=0.166667;AN=12;AO=45;CIGAR=1X;DP=631;DPB=631;DPRA=2.05788;EPP=100.727;EPPR=1275.49;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.912969;PAO=0;PQA=0;PQR=0;PRO=0;QA=1797;QR=23161;RO=586;RPL=0;RPP=100.727;RPPR=1275.49;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=586;SRP=1275.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:1152:0:0:0,-8.72987,-103.964 0/0:106:106,0:106:4213:0:0:0,-31.9092,-379.143 0/0:80:80,0:80:3155:0:0:0,-24.0824,-284.011 0/0:96:96,0:96:3807:0:0:0,-28.8989,-342.644 0/1:136:123,13:123:4856:13:527:-6.83668,0,-396.004 0/1:184:152,32:152:5978:32:1270:-59.1775,0,-482.426 dDocent_Contig_9346 36 . T G 449.895 . AB=0.235294;ABP=54.7424;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=200;DPB=200;DPRA=1.47826;EPP=46.4397;EPPR=393.875;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9778;NS=6;NUMALT=1;ODDS=0;PAIRED=0.95;PAIREDR=0.95;PAO=0;PQA=0;PQR=0;PRO=0;QA=812;QR=7159;RO=180;RPL=0;RPP=46.4397;RPPR=393.875;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=180;SRP=393.875;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:24,6:24:937:6:242:-13.126,0,-75.5981 0/0:27:27,0:27:1087:0:0:0,-8.12781,-98.1145 0/0:17:17,0:17:667:0:0:0,-5.11751,-60.3566 0/1:55:41,14:41:1649:14:570:-35.0853,0,-132.073 0/0:30:30,0:30:1205:0:0:0,-9.0309,-108.726 0/0:41:41,0:41:1614:0:0:0,-12.3422,-145.486 dDocent_Contig_9347 22 . T C 3287.64 . AB=0.0217391;ABP=94.401;AC=4;AF=0.333334;AN=12;AO=41;CIGAR=1X1M;DP=316;DPB=316;DPRA=1.38211;EPP=92.0407;EPPR=448.162;GTI=0;LEN=1;MEANALT=1.66667;MQM=59.7561;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1654;QR=8063;RO=205;RPL=0;RPP=92.0407;RPPR=448.162;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=205;SRP=448.162;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:27:26,0,0:26:1015:0,0:0,0:0,-7.82678,-91.2409,-7.82678,-91.2409,-91.2409 0|1:46:35,10,1:35:1369:10,1:405,36:-22.9002,0,-109.57,-30.5029,-109.644,-142.742 0|0:89:82,0,6:82:3248:0,6:0,240:0,-24.6845,-292.03,-4.74281,-272.275,-270.469 0|0:55:55,0,0:55:2152:0,0:0,0:0,-16.5566,-193.877,-16.5566,-193.877,-193.877 1|1:35:1,0,34:1:40:0,34:0,1378:-120.276,-120.577,-123.872,-6.54037,-10.235,0 0|1:64:6,58,0:6:239:58,0:2310,0:-188.793,0,-2.61888,-190.599,-20.0786,-210.28 dDocent_Contig_9348 53 . C G 947.864 . AB=0.351852;ABP=23.5991;AC=2;AF=0.166667;AN=12;AO=40;CIGAR=1X;DP=326;DPB=326;DPRA=1.23288;EPP=89.8692;EPPR=624.051;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.7;PAIREDR=0.79021;PAO=0;PQA=0;PQR=0;PRO=0;QA=1519;QR=10614;RO=286;RPL=15;RPP=8.43898;RPPR=3.13178;RPR=25;RUN=1;SAF=15;SAP=8.43898;SAR=25;SRF=141;SRP=3.13178;SRR=145;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:46:46,0:46:1718:0:0:0,-13.8474,-154.866 0/0:42:42,0:42:1542:0:0:0,-12.6433,-139.037 0/0:58:58,0:58:2153:0:0:0,-17.4597,-193.989 0/0:72:70,2:70:2598:2:76:0,-14.4606,-226.788 0/1:48:38,10:38:1409:10:397:-21.64,0,-112.632 0/1:60:32,28:32:1194:28:1046:-76.3682,0,-89.6875 dDocent_Contig_9350 148 . A C 167.055 . AB=0.112676;ABP=280.561;AC=3;AF=0.25;AN=12;AO=26;CIGAR=1X;DP=310;DPB=310;DPRA=1.67879;EPP=59.4686;EPPR=617.537;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1021;QR=11217;RO=283;RPL=0;RPP=59.4686;RPPR=617.537;RPR=26;RUN=1;SAF=0;SAP=59.4686;SAR=26;SRF=0;SRP=617.537;SRR=283;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1313:0:0:0,-9.93399,-118.432 0/0:36:35,1:35:1373:1:41:0,-6.74251,-119.729 0/1:114:104,10:104:4102:10:396:-1.67794,0,-334.837 0/1:47:42,5:42:1691:5:199:-4.13834,0,-138.262 0/1:52:42,9:42:1658:9:344:-15.7554,0,-133.907 0/0:28:27,1:27:1080:1:41:0,-4.33427,-93.3868 dDocent_Contig_9353 10 . C T 160.693 . AB=0.131579;ABP=137.413;AC=3;AF=0.25;AN=12;AO=16;CIGAR=1X;DP=202;DPB=202;DPRA=1.27193;EPP=37.7539;EPPR=406.904;GTI=0;LEN=1;MEANALT=1;MQM=56.0625;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.625;PAIREDR=0.516129;PAO=0;PQA=0;PQR=0;PRO=0;QA=631;QR=7495;RO=186;RPL=0;RPP=37.7539;RPPR=406.904;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=186;SRP=406.904;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:47:41,6:41:1655:6:240:-7.54936,0,-135.02 0/0:27:27,0:27:1083:0:0:0,-8.12781,-97.7589 0/0:30:30,0:30:1220:0:0:0,-9.0309,-110.069 0/1:33:30,3:30:1191:3:110:-0.285033,0,-97.5333 0/0:31:30,1:30:1223:1:41:0,-5.23736,-106.242 0/1:34:28,6:28:1123:6:240:-11.7404,0,-91.1176 dDocent_Contig_9354 98 . N T 587.495 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=18;CIGAR=1X;DP=18;DPB=18;DPRA=0;EPP=42.0968;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0.333333;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=625;QR=0;RO=0;RPL=18;RPP=42.0968;RPPR=0;RPR=0;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:7:0,7:0:0:7:243:-22.2089,-2.10721,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:6:0,6:0:0:6:207:-18.9682,-1.80618,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 dDocent_Contig_9355 11 . T C 42.8732 . AB=0.111111;ABP=73.9451;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=338;DPB=338;DPRA=1.13924;EPP=31.2394;EPPR=706.567;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.962963;PAO=0;PQA=0;PQR=0;PRO=0;QA=517;QR=12999;RO=324;RPL=0;RPP=31.2394;RPPR=706.567;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=324;SRP=706.567;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:55:53,2:53:2135:2:82:0,-8.77697,-184.543 0/0:71:66,5:66:2640:5:194:0,-3.54203,-219.897 0/1:54:48,6:48:1933:6:241:-5.81018,0,-157.911 0/0:69:69,0:69:2760:0:0:0,-20.7711,-248.5 0/0:51:51,0:51:2049:0:0:0,-15.3525,-184.594 0/0:38:37,0:37:1482:0:0:0,-11.1381,-133.214 dDocent_Contig_9357 40 . A G 5936.15 . AB=0.155981;ABP=1077.24;AC=2;AF=0.166667;AN=12;AO=167;CIGAR=1X3M2X;DP=1632;DPB=1606.83;DPRA=0;EPP=365.646;EPPR=2762.95;GTI=0;LEN=1;MEANALT=3.8;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.934132;PAIREDR=0.944925;PAO=0;PQA=0;PQR=0;PRO=0;QA=6372;QR=49711;RO=1271;RPL=0;RPP=365.646;RPPR=2762.95;RPR=167;RUN=1;SAF=167;SAP=365.646;SAR=0;SRF=1271;SRP=2762.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:245:217,0,26:217:8507:0,26:0,1021:-18.6307,-83.9542,-783.492,0,-699.527,-691.7 0|0:342:313,4,11:313:12193:4,11:155,436:0,-81.4892,-1082.35,-58.3357,-1047.67,-1057.09 0|0:272:214,1,46:214:8470:1,46:39,1794:-83.0388,-144.253,-841.046,0,-693.904,-683.263 0|0:275:211,5,54:211:8229:5,54:192,2058:-105.276,-153.033,-827.903,0,-660.619,-660.124 0|1:278:165,98,14:165:6446:98,14:3725,535:-255.804,0,-500.406,-261.582,-486.016,-787.273 0|1:220:151,59,0:151:5866:59,0:2261,0:-140.088,0,-464.205,-185.543,-481.966,-667.524 dDocent_Contig_9358 8 . G A 205.961 . AB=0.421053;ABP=4.03889;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=508;DPB=508;DPRA=0;EPP=42.0968;EPPR=1067.03;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=682;QR=18685;RO=490;RPL=0;RPP=42.0968;RPPR=1067.03;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=490;SRP=1067.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:11,8:11:427:8:302:-21.8179,0,-33.0654 0/0:73:72,1:72:2757:1:39:0,-18.0786,-244.415 0/0:64:62,2:62:2382:2:76:0,-12.0512,-207.374 0/0:73:69,4:69:2604:4:155:0,-7.64975,-220.223 0/0:111:110,1:110:4204:1:38:0,-29.6171,-374.639 0/0:168:166,2:166:6311:2:72:0,-43.7364,-561.082 dDocent_Contig_9359 9 . A G 576.175 . AB=0.179104;ABP=182.789;AC=3;AF=0.25;AN=12;AO=40;CIGAR=1X;DP=357;DPB=357;DPRA=2.656;EPP=89.8692;EPPR=691.367;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1515;QR=12035;RO=317;RPL=0;RPP=89.8692;RPPR=691.367;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=317;SRP=691.367;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:961:0:0:0,-7.52575,-86.8046 0/0:88:85,3:85:3231:3:117:0,-15.5803,-280.034 0/0:43:42,1:42:1594:1:39:0,-9.04772,-139.832 0/1:54:48,6:48:1835:6:221:-3.99031,0,-149.146 0/1:70:58,12:58:2179:12:456:-20.3168,0,-175.268 0/1:77:59,18:59:2235:18:682:-38.5316,0,-178.199 dDocent_Contig_9360 37 . C T 7645.82 . AB=0.142857;ABP=282.2;AC=2;AF=0.166667;AN=12;AO=36;CIGAR=9M1X8M;DP=456;DPB=729.778;DPRA=0;EPP=81.1833;EPPR=239.701;GTI=0;LEN=1;MEANALT=6.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1426;QR=4235;RO=109;RPL=0;RPP=81.1833;RPPR=239.701;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=109;SRP=239.701;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:43:1,37,4:1:37:37,4:1365,151:-120.668,-9.35468,-1.24293,-108.595,0,-110.418 0|0:94:21,49,11:21:792:49,11:1735,435:-134.944,0,-50.1418,-105.463,-29.0901,-167.051 0|1:115:21,68,21:21:829:68,21:2319,840:-182.756,-0.983696,-48.7339,-119.871,0,-181.776 0|0:60:11,44,0:11:427:44,0:1530,0:-121.063,0,-21.8695,-124.374,-35.1148,-159.466 0|0:81:31,45,0:31:1214:45,0:1606,0:-121.604,0,-86.3469,-130.936,-99.8932,-230.776 0|0:63:24,35,0:24:936:35,0:1242,0:-93.9914,0,-66.475,-101.216,-77.011,-178.168 dDocent_Contig_9361 23 . G C 1974.81 . AB=0.472603;ABP=3.96218;AC=5;AF=0.416667;AN=12;AO=71;CIGAR=1X1M1X;DP=195;DPB=195;DPRA=0;EPP=157.185;EPPR=265.758;GTI=0;LEN=1;MEANALT=1.5;MQM=58.7042;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.929577;PAIREDR=0.694215;PAO=0;PQA=0;PQR=0;PRO=0;QA=2857;QR=4646;RO=121;RPL=0;RPP=157.185;RPPR=265.758;RPR=71;RUN=1;SAF=71;SAP=157.185;SAR=0;SRF=121;SRP=265.758;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:11:9,2:9:333:2:81:-4.09255,0,-27.0066 0|0:49:46,2:46:1778:2:81:0,-7.02521,-152.647 0|1:29:17,12:17:642:12:486:-35.3618,0,-49.3769 0|1:29:16,13:16:627:13:524:-38.1434,0,-48.0388 0|1:41:7,32:7:261:32:1292:-104.234,0,-11.7273 0|1:36:26,10:26:1005:10:393:-24.8704,0,-79.9205 dDocent_Contig_9362 42 . T C 376.577 . AB=0.213483;ABP=66.471;AC=2;AF=0.166667;AN=12;AO=19;CIGAR=1X;DP=270;DPB=270;DPRA=0.983425;EPP=44.2683;EPPR=548.05;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.789474;PAIREDR=0.900398;PAO=0;PQA=0;PQR=0;PRO=0;QA=744;QR=9684;RO=251;RPL=0;RPP=44.2683;RPPR=548.05;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=251;SRP=548.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:62:62,0:62:2373:0:0:0,-18.6639,-213.766 0/0:63:63,0:63:2444:0:0:0,-18.9649,-220.137 0/0:24:24,0:24:943:0:0:0,-7.22472,-85.1793 0/0:32:32,0:32:1235:0:0:0,-9.63296,-111.439 0/1:57:50,7:50:1929:7:273:-7.77571,0,-156.665 0/1:32:20,12:20:760:12:471:-33.1038,0,-59.0892 dDocent_Contig_9364 16 . G T 70.2048 . AB=0.428571;ABP=3.32051;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=136;DPB=136;DPRA=0.271318;EPP=9.52472;EPPR=291.816;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.413534;PAO=0;PQA=0;PQR=0;PRO=0;QA=111;QR=5293;RO=133;RPL=0;RPP=9.52472;RPPR=291.816;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=133;SRP=291.816;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:7:4,3:4:164:3:111:-8.24233,0,-13.0427 0/0:16:16,0:16:643:0:0:0,-4.81648,-58.2043 0/0:24:24,0:24:958:0:0:0,-7.22472,-86.5191 0/0:35:35,0:35:1382:0:0:0,-10.536,-124.64 0/0:35:35,0:35:1400:0:0:0,-10.536,-126.255 0/0:19:19,0:19:746:0:0:0,-5.71957,-67.4598 dDocent_Contig_9365 61 . G A 2329.32 . AB=0.477011;ABP=3.809;AC=6;AF=0.5;AN=12;AO=83;CIGAR=1X;DP=174;DPB=174;DPRA=0;EPP=183.243;EPPR=200.614;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.686747;PAIREDR=0.615385;PAO=0;PQA=0;PQR=0;PRO=0;QA=3272;QR=3537;RO=91;RPL=83;RPP=183.243;RPPR=200.614;RPR=0;RUN=1;SAF=83;SAP=183.243;SAR=0;SRF=91;SRP=200.614;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:7,17:7:271:17:655:-52.0546,0,-17.5302 0/1:21:9,12:9:361:12:476:-36.8692,0,-26.5323 0/1:25:14,11:14:543:11:445:-32.8803,0,-41.679 0/1:37:21,16:21:812:16:631:-45.9817,0,-62.2542 0/1:32:20,12:20:777:12:472:-33.1981,0,-60.6094 0/1:35:20,15:20:773:15:593:-43.1697,0,-59.3487 dDocent_Contig_9366 15 . T C 4907.42 . AB=0.383948;ABP=56.9391;AC=5;AF=0.416667;AN=12;AO=177;CIGAR=1X;DP=502;DPB=502;DPRA=2.24878;EPP=387.361;EPPR=708.739;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990769;PAO=0;PQA=0;PQR=0;PRO=0;QA=7081;QR=12607;RO=325;RPL=0;RPP=387.361;RPPR=708.739;RPR=177;RUN=1;SAF=177;SAP=387.361;SAR=0;SRF=325;SRP=708.739;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:60:50,10:50:1941:10:405:-18.7477,0,-156.834 0/1:68:62,6:62:2387:6:244:-1.86879,0,-194.534 0/0:41:41,0:41:1603:0:0:0,-12.3422,-144.516 0/1:109:96,13:96:3678:13:523:-14.6042,0,-298.265 0/1:131:36,95:36:1419:95:3755:-298.533,0,-88.5314 0/1:93:40,53:40:1579:53:2154:-166.029,0,-114.359 dDocent_Contig_9367 81 . G A 1664.57 . AB=0.384211;ABP=25.1365;AC=5;AF=0.416667;AN=12;AO=75;CIGAR=1X;DP=233;DPB=233;DPRA=0;EPP=165.871;EPPR=346.103;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.973333;PAIREDR=0.974684;PAO=0;PQA=0;PQR=0;PRO=0;QA=2631;QR=5367;RO=158;RPL=75;RPP=165.871;RPPR=346.103;RPR=0;RUN=1;SAF=75;SAP=165.871;SAR=0;SRF=158;SRP=346.103;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:44:21,23:21:710:23:799:-58.9829,0,-50.9713 0/1:46:25,21:25:867:21:741:-53.1668,0,-64.5003 0/1:34:29,5:29:982:5:178:-6.1337,0,-78.4501 0/1:29:19,10:19:645:10:350:-23.1066,0,-49.638 0/0:43:41,2:41:1409:2:62:0,-7.05609,-121.22 0/1:37:23,14:23:754:14:501:-34.2888,0,-57.0265 dDocent_Contig_9368 66 . T A 60.9762 . AB=0.132075;ABP=65.3275;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=350;DPB=350;DPRA=1.13901;EPP=22.5536;EPPR=743.482;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=273;QR=12332;RO=341;RPL=9;RPP=22.5536;RPPR=743.482;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=341;SRP=743.482;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:74:72,2:72:2608:2:15:0,-20.8512,-233.527 0/1:53:46,7:46:1663:7:258:-7.6205,0,-133.997 0/0:14:14,0:14:517:0:0:0,-4.21442,-46.8721 0/0:42:42,0:42:1511:0:0:0,-12.6433,-136.28 0/0:25:25,0:25:902:0:0:0,-7.52575,-81.4965 0/0:142:142,0:142:5131:0:0:0,-42.7463,-461.901 dDocent_Contig_9369 44 . G A 3246.53 . AB=0.48954;ABP=3.23744;AC=6;AF=0.5;AN=12;AO=117;CIGAR=1X;DP=239;DPB=239;DPRA=0;EPP=257.073;EPPR=267.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.811966;PAIREDR=0.827869;PAO=0;PQA=0;PQR=0;PRO=0;QA=4510;QR=4766;RO=122;RPL=0;RPP=257.073;RPPR=267.93;RPR=117;RUN=1;SAF=117;SAP=257.073;SAR=0;SRF=122;SRP=267.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:27:17,10:17:653:10:371:-25.6089,0,-50.9692 0/1:40:26,14:26:1011:14:514:-34.5528,0,-79.244 0/1:28:14,14:14:553:14:548:-41.2287,0,-41.6822 0/1:69:40,29:40:1575:29:1120:-80.3225,0,-121.226 0/1:34:13,21:13:511:21:821:-63.9773,0,-36.0988 0/1:41:12,29:12:463:29:1136:-90.185,0,-29.6703 dDocent_Contig_9370 8 . G T 110.133 . AB=0.12069;ABP=147.975;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=430;DPB=430;DPRA=1.0035;EPP=39.9253;EPPR=899.828;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.823529;PAIREDR=0.905569;PAO=0;PQA=0;PQR=0;PRO=0;QA=655;QR=15809;RO=413;RPL=0;RPP=39.9253;RPPR=899.828;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=413;SRP=899.828;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:55:54,1:54:2063:1:39:0,-12.6601,-182.007 0/0:65:65,0:65:2474:0:0:0,-19.5669,-222.868 0/0:116:114,2:114:4380:2:78:0,-27.516,-386.86 0/0:78:78,0:78:2988:0:0:0,-23.4803,-269.088 0/1:56:48,8:48:1827:8:306:-11.0433,0,-147.826 0/1:60:54,6:54:2077:6:232:-3.18713,0,-169.1 dDocent_Contig_9371 8 . G C 280.23 . AB=0.194805;ABP=65.3062;AC=1;AF=0.0833333;AN=12;AO=46;CIGAR=1X;DP=580;DPB=580;DPRA=1.16471;EPP=102.898;EPPR=1140.86;GTI=0;LEN=1;MEANALT=1.8;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.934783;PAIREDR=0.917939;PAO=0;PQA=0;PQR=0;PRO=0;QA=1767;QR=20068;RO=524;RPL=0;RPP=102.898;RPPR=1140.86;RPR=46;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=524;SRP=1140.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:83:75,7:75:2892:7:273:0,-0.136103,-235.511 0/0:130:120,10:120:4585:10:389:0,-3.76552,-377.333 0/1:77:61,15:61:2333:15:583:-29.5454,0,-186.917 0/0:109:97,8:97:3703:8:292:0,-5.34656,-306.76 0/0:85:85,0:85:3252:0:0:0,-25.5875,-292.829 0/0:96:86,6:86:3303:6:230:0,-6.97293,-276.368 dDocent_Contig_9373 42 . C A 11468.6 . AB=0.438944;ABP=32.4434;AC=7;AF=0.583333;AN=12;AO=400;CIGAR=1X;DP=910;DPB=910;DPRA=0;EPP=862.935;EPPR=1110.46;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.9975;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=15877;QR=20291;RO=510;RPL=1;RPP=862.935;RPPR=1110.46;RPR=399;RUN=1;SAF=400;SAP=871.599;SAR=0;SRF=510;SRP=1110.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:206:175,31:175:6955:31:1254:-51.1159,0,-563.632 0/1:221:127,94:127:5024:94:3719:-268.207,0,-385.516 0/1:266:131,135:131:5227:135:5342:-400.551,0,-390.217 0/1:192:67,125:67:2686:125:4965:-388.957,0,-184.062 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 0/1:24:10,14:10:399:14:556:-43.1583,0,-29.0434 dDocent_Contig_9374 12 . T C 1255.64 . AB=0.230189;ABP=170.574;AC=6;AF=0.5;AN=12;AO=61;CIGAR=1X;DP=265;DPB=265;DPRA=0;EPP=135.47;EPPR=443.819;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.52459;PAIREDR=0.581281;PAO=0;PQA=0;PQR=0;PRO=0;QA=2370;QR=7488;RO=203;RPL=0;RPP=135.47;RPPR=443.819;RPR=61;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=203;SRP=443.819;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:23,12:23:878:12:451:-30.3914,0,-68.7985 0/1:53:37,16:37:1336:16:634:-41.4398,0,-104.565 0/1:33:28,5:28:1055:5:187:-7.25333,0,-85.3187 0/1:68:50,17:50:1848:17:656:-39.0797,0,-146.286 0/1:42:34,8:34:1243:8:321:-16.6137,0,-99.5203 0/1:34:31,3:31:1128:3:121:-1.04497,0,-91.5693 dDocent_Contig_9375 6 . C G 113.988 . AB=0.172414;ABP=57.0725;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=167;DPB=167;DPRA=2.47917;EPP=29.068;EPPR=297.56;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.941935;PAO=0;PQA=0;PQR=0;PRO=0;QA=406;QR=6002;RO=155;RPL=0;RPP=29.068;RPPR=339.589;RPR=12;RUN=1;SAF=0;SAP=29.068;SAR=12;SRF=150;SRP=297.56;SRR=5;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:544:0:0:0,-4.21442,-49.3061 0/0:27:27,0:27:1047:0:0:0,-8.12781,-94.5371 0/0:7:7,0:7:267:0:0:0,-2.10721,-24.3925 0/0:14:13,1:13:507:1:36:0,-0.616145,-42.3812 0/1:58:48,10:48:1852:10:334:-12.9215,0,-149.468 0/0:47:46,1:46:1785:1:36:0,-10.5501,-157.302 dDocent_Contig_9376 13 . G C 889.54 . AB=0.113497;ABP=1272;AC=3;AF=0.25;AN=12;AO=155;CIGAR=1X;DP=1644;DPB=1644;DPRA=7.27273;EPP=339.589;EPPR=3236.33;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6060;QR=58246;RO=1489;RPL=0;RPP=339.589;RPPR=3236.33;RPR=155;RUN=1;SAF=155;SAP=339.589;SAR=0;SRF=1489;SRP=3236.33;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:277:249,28:249:9771:28:1102:-16.0837,0,-795.444 0/1:675:596,79:596:23311:79:3044:-70.8605,0,-1892.92 0/0:220:205,15:205:8014:15:586:0,-13.157,-667.803 0/0:402:373,29:373:14567:29:1165:0,-15.8839,-1204.88 0/1:26:22,4:22:852:4:163:-7.23165,0,-69.1554 0/0:44:44,0:44:1731:0:0:0,-13.2453,-156.014 dDocent_Contig_9378 8 . G A 328.951 . AB=0.171429;ABP=134.291;AC=4;AF=0.333333;AN=12;AO=26;CIGAR=1X;DP=199;DPB=199;DPRA=0;EPP=59.4686;EPPR=378.675;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.538462;PAIREDR=0.65896;PAO=0;PQA=0;PQR=0;PRO=0;QA=974;QR=6600;RO=173;RPL=0;RPP=59.4686;RPPR=378.675;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=173;SRP=378.675;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:26,1:26:983:1:39:0,-4.23125,-84.882 0/1:44:38,6:38:1441:6:222:-7.09119,0,-116.724 0/1:32:24,8:24:912:8:299:-17.6317,0,-72.762 0/1:39:33,6:33:1257:6:226:-8.96194,0,-101.683 0/0:32:31,1:31:1191:1:37:0,-5.93513,-103.789 0/1:25:21,4:21:816:4:151:-6.43203,0,-66.2395 dDocent_Contig_9381 43 . T A 2178.48 . AB=0.847826;ABP=51.3492;AC=3;AF=0.25;AN=12;AO=66;CIGAR=1X;DP=218;DPB=218;DPRA=1.0069;EPP=146.327;EPPR=333.074;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2582;QR=6044;RO=152;RPL=0;RPP=146.327;RPPR=333.074;RPR=66;RUN=1;SAF=66;SAP=146.327;SAR=0;SRF=152;SRP=333.074;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:849:0:0:0,-6.62266,-76.7182 0/0:42:42,0:42:1659:0:0:0,-12.6433,-149.545 0/0:34:34,0:34:1363:0:0:0,-10.235,-122.93 0/0:47:47,0:47:1894:0:0:0,-14.1484,-170.662 1/1:27:0,27:0:0:27:1040:-93.891,-8.12781,0 0/1:46:7,39:7:279:39:1542:-125.178,0,-11.6333 dDocent_Contig_9382 14 . C A 4417.98 . AB=0.428962;ABP=19.0531;AC=6;AF=0.5;AN=12;AO=157;CIGAR=1X2M1X;DP=366;DPB=366;DPRA=0;EPP=343.931;EPPR=456.848;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.33121;PAIREDR=0.358852;PAO=0;PQA=0;PQR=0;PRO=0;QA=6238;QR=8256;RO=209;RPL=0;RPP=343.931;RPPR=456.848;RPR=157;RUN=1;SAF=157;SAP=343.931;SAR=0;SRF=209;SRP=456.848;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:44:29,15:29:1121:15:602:-41.2746,0,-87.9361 0|1:70:48,22:48:1896:22:884:-58.7985,0,-149.784 0|1:53:30,23:30:1181:23:925:-67.6019,0,-90.6199 0|1:98:42,56:42:1664:56:2204:-169.043,0,-120.496 0|1:52:33,19:33:1309:19:741:-51.3643,0,-102.425 0|1:49:27,22:27:1085:22:882:-64.9379,0,-83.1884 dDocent_Contig_9383 31 . A G 10164.2 . AB=0.701149;ABP=125.312;AC=7;AF=0.583333;AN=12;AO=314;CIGAR=1X;DP=418;DPB=418;DPRA=0;EPP=684.853;EPPR=228.843;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=12548;QR=4179;RO=104;RPL=0;RPP=684.853;RPPR=228.843;RPR=314;RUN=1;SAF=314;SAP=684.853;SAR=0;SRF=104;SRP=228.843;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:53:24,29:24:971:29:1152:-88.0103,0,-71.7329 0/1:90:31,59:31:1246:59:2383:-187.52,0,-85.3181 0/1:55:13,42:13:507:42:1661:-133.168,0,-29.417 0/1:90:28,62:28:1130:62:2460:-194.455,0,-74.8891 1/1:70:0,70:0:0:70:2794:-251.563,-21.0721,0 0/1:60:8,52:8:325:52:2098:-170.931,0,-11.5578 dDocent_Contig_9384 7 . A C 148.793 . AB=0.122302;ABP=175.244;AC=2;AF=0.166667;AN=12;AO=27;CIGAR=1X;DP=377;DPB=377;DPRA=1.42347;EPP=61.6401;EPPR=760.854;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.407407;PAIREDR=0.527221;PAO=0;PQA=0;PQR=0;PRO=0;QA=1047;QR=13338;RO=349;RPL=0;RPP=61.6401;RPPR=760.854;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=349;SRP=760.854;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:66:61,5:61:2307:5:194:0,-2.03513,-190.016 0/1:78:69,9:69:2649:9:346:-8.01901,0,-215.118 0/1:61:53,8:53:2044:8:312:-10.0821,0,-165.831 0/0:74:69,5:69:2645:5:195:0,-4.35202,-220.314 0/0:33:33,0:33:1263:0:0:0,-9.93399,-113.962 0/0:65:64,0:64:2430:0:0:0,-19.2659,-218.636 dDocent_Contig_9385 14 . T C 617.087 . AB=0.176768;ABP=182.694;AC=1;AF=0.0833333;AN=12;AO=37;CIGAR=1X;DP=1019;DPB=1019;DPRA=1.1589;EPP=83.3548;EPPR=2126.72;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997963;PAO=0;PQA=0;PQR=0;PRO=0;QA=1402;QR=38673;RO=982;RPL=0;RPP=83.3548;RPPR=2135.4;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=981;SRP=2126.72;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:144:144,0:144:5675:0:0:0,-43.3483,-510.576 0/0:218:217,1:217:8516:1:30:0,-62.625,-763.01 0/0:131:130,1:130:5172:1:10:0,-38.4349,-464.343 0/0:145:145,0:145:5728:0:0:0,-43.6493,-515.351 0/0:183:183,0:183:7180:0:0:0,-55.0885,-645.887 0/1:198:163,35:163:6402:35:1362:-63.2316,0,-516.34 dDocent_Contig_9386 55 . A T 277.652 . AB=0.2;ABP=57.7314;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=284;DPB=284;DPRA=0.654206;EPP=33.4109;EPPR=589.308;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.785714;PAIREDR=0.803704;PAO=0;PQA=0;PQR=0;PRO=0;QA=562;QR=10630;RO=270;RPL=14;RPP=33.4109;RPPR=589.308;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=270;SRP=589.308;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1611:0:0:0,-12.3422,-145.23 0/1:48:36,12:36:1389:12:482:-29.2814,0,-110.815 0/1:22:20,2:20:784:2:80:-0.968915,0,-64.2562 0/0:34:34,0:34:1349:0:0:0,-10.235,-121.676 0/0:62:62,0:62:2462:0:0:0,-18.6639,-221.736 0/0:77:77,0:77:3035:0:0:0,-23.1793,-273.253 dDocent_Contig_9387 7 . A C 71.1065 . AB=0.146341;ABP=47.552;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=131;DPB=131;DPRA=2.27778;EPP=16.0391;EPPR=274.444;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992;PAO=0;PQA=0;PQR=0;PRO=0;QA=229;QR=4803;RO=125;RPL=0;RPP=16.0391;RPPR=274.444;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=125;SRP=274.444;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:5:5,0:5:194:0:0:0,-1.50515,-17.8328 0/0:13:13,0:13:506:0:0:0,-3.91339,-45.8893 0/0:31:31,0:31:1185:0:0:0,-9.33193,-106.948 0/0:14:14,0:14:545:0:0:0,-4.21442,-49.3963 0/0:27:27,0:27:1021:0:0:0,-8.12781,-92.1993 0/1:41:35,6:35:1352:6:229:-8.63351,0,-109.623 dDocent_Contig_9388 34 . G A 7227.47 . AB=0.53159;ABP=6.98897;AC=6;AF=0.5;AN=12;AO=244;CIGAR=1X;DP=459;DPB=459;DPRA=0;EPP=532.85;EPPR=427.457;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.987705;PAIREDR=0.897674;PAO=0;PQA=0;PQR=0;PRO=0;QA=9675;QR=8582;RO=215;RPL=0;RPP=532.85;RPPR=469.877;RPR=244;RUN=1;SAF=244;SAP=532.85;SAR=0;SRF=210;SRP=427.457;SRR=5;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:69:28,41:28:1099:41:1630:-126.161,0,-78.4201 0/1:93:30,63:30:1194:63:2482:-195.532,0,-79.7405 0/1:81:42,39:42:1676:39:1541:-114.542,0,-126.684 0/1:80:28,52:28:1109:52:2074:-162.758,0,-76.0148 0/1:56:37,19:37:1490:19:743:-50.3315,0,-117.487 0/1:80:50,30:50:2014:30:1205:-84.6452,0,-157.368 dDocent_Contig_9389 76 . T A 156.893 . AB=0.135593;ABP=139.114;AC=3;AF=0.25;AN=12;AO=19;CIGAR=1X;DP=263;DPB=263;DPRA=0.995455;EPP=44.2683;EPPR=532.85;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.526316;PAIREDR=0.540984;PAO=0;PQA=0;PQR=0;PRO=0;QA=709;QR=9407;RO=244;RPL=19;RPP=44.2683;RPPR=532.85;RPR=0;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=244;SRP=532.85;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:51:46,5:46:1743:5:167:-0.00218763,0,-141.768 0/1:46:40,6:40:1523:6:233:-7.4927,0,-123.495 0/1:21:16,5:16:605:5:193:-11.4177,0,-48.4511 0/0:63:62,1:62:2449:1:38:0,-15.1676,-216.765 0/0:38:36,2:36:1388:2:78:0,-4.03567,-117.797 0/0:44:44,0:44:1699:0:0:0,-13.2453,-153.126 dDocent_Contig_9390 31 . A G 1941.09 . AB=0.262136;ABP=154.866;AC=2;AF=0.166667;AN=12;AO=83;CIGAR=1X;DP=1407;DPB=1407;DPRA=0.837452;EPP=183.243;EPPR=2878.04;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3298;QR=52501;RO=1324;RPL=0;RPP=183.243;RPPR=2878.04;RPR=83;RUN=1;SAF=83;SAP=183.243;SAR=0;SRF=1324;SRP=2878.04;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:197:196,1:196:7705:1:41:0,-55.2083,-689.003 0/0:267:267,0:267:10630:0:0:0,-80.375,-956.021 0/0:259:259,0:259:10310:0:0:0,-77.9668,-927.249 0/0:375:374,1:374:14824:1:36:0,-109.288,-1329.48 0/1:202:139,63:139:5502:63:2513:-165.497,0,-434.212 0/1:107:89,18:89:3530:18:708:-31.8337,0,-285.532 dDocent_Contig_9391 106 . N T 4516.67 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=146;CIGAR=2X;DP=147;DPB=147;DPRA=0;EPP=320.045;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.938356;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4992;QR=0;RO=0;RPL=0;RPP=320.045;RPPR=0;RPR=146;RUN=1;SAF=0;SAP=320.045;SAR=146;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:15:0,15:0:0:15:515:-46.6772,-4.51545,0 1|1:5:0,5:0:0:5:174:-16.002,-1.50515,0 1|1:13:0,13:0:0:13:432:-39.2,-3.91339,0 1|1:40:0,40:0:0:40:1375:-124.049,-12.0412,0 1|1:31:0,31:0:0:31:1048:-94.6248,-9.33193,0 1|1:43:0,42:0:0:42:1448:-130.268,-12.6433,0 dDocent_Contig_9392 65 . C T 36.3666 . AB=0.142857;ABP=34.0313;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=185;DPB=185;DPRA=0.89172;EPP=11.6962;EPPR=396.047;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.729282;PAO=0;PQA=0;PQR=0;PRO=0;QA=147;QR=6645;RO=181;RPL=2;RPP=3.0103;RPPR=6.47746;RPR=2;RUN=1;SAF=2;SAP=3.0103;SAR=2;SRF=99;SRP=6.47746;SRR=82;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:38,0:38:1382:0:0:0,-11.4391,-124.671 0/0:41:41,0:41:1487:0:0:0,-12.3422,-134.113 0/1:28:24,4:24:877:4:147:-5.15944,0,-70.8109 0/0:48:48,0:48:1792:0:0:0,-14.4494,-161.534 0/0:13:13,0:13:473:0:0:0,-3.91339,-42.9045 0/0:17:17,0:17:634:0:0:0,-5.11751,-57.391 dDocent_Contig_9393 76 . A C 354.162 . AB=0.301887;ABP=21.0786;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=210;DPB=210;DPRA=1.6879;EPP=37.7539;EPPR=424.276;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.654639;PAO=0;PQA=0;PQR=0;PRO=0;QA=584;QR=7114;RO=194;RPL=8;RPP=3.0103;RPPR=4.62211;RPR=8;RUN=1;SAF=8;SAP=3.0103;SAR=8;SRF=103;SRP=4.62211;SRR=91;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:868:0:0:0,-7.22472,-78.4422 0/0:41:41,0:41:1488:0:0:0,-12.3422,-134.213 0/0:43:43,0:43:1590:0:0:0,-12.9443,-143.38 0/0:33:33,0:33:1195:0:0:0,-9.93399,-107.851 0/1:53:37,16:37:1364:16:584:-36.9391,0,-107.094 0/0:16:16,0:16:609:0:0:0,-4.81648,-55.1486 dDocent_Contig_9394 12 . C A 169.748 . AB=0.102564;ABP=56.5176;AC=3;AF=0.25;AN=12;AO=11;CIGAR=1X;DP=234;DPB=234;DPRA=0.466942;EPP=26.8965;EPPR=412.231;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.545455;PAIREDR=0.973094;PAO=0;PQA=0;PQR=0;PRO=0;QA=447;QR=8922;RO=223;RPL=0;RPP=26.8965;RPPR=487.249;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=214;SRP=412.231;SRR=9;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:1166:0:0:0,-8.72987,-105.216 0/0:35:33,2:33:1292:2:82:0,-2.75637,-108.768 1/1:4:0,4:0:0:4:161:-14.8749,-1.20412,0 0/1:39:35,4:35:1389:4:163:-3.31826,0,-113.527 0/0:92:92,0:92:3701:0:0:0,-27.6948,-333.09 0/0:35:34,1:34:1374:1:41:0,-6.44148,-119.817 dDocent_Contig_9395 8 . G A 1594.26 . AB=0.223188;ABP=232.626;AC=2;AF=0.166667;AN=12;AO=115;CIGAR=1X;DP=1445;DPB=1445;DPRA=0.959596;EPP=252.73;EPPR=2888.9;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998495;PAO=0;PQA=0;PQR=0;PRO=0;QA=4414;QR=50626;RO=1329;RPL=0;RPP=252.73;RPPR=2888.9;RPR=115;RUN=1;SAF=115;SAP=252.73;SAR=0;SRF=1329;SRP=2888.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:226:182,44:182:6945:44:1684:-83.7887,0,-556.907 0/0:343:320,23:320:12196:23:889:0,-22.9236,-1016.82 0/1:119:86,33:86:3263:33:1271:-78.8592,0,-257.998 0/0:262:247,15:247:9434:15:570:0,-27.2293,-797.129 0/0:289:288,0:288:10933:0:0:0,-86.6966,-983.193 0/0:206:206,0:206:7855:0:0:0,-62.0122,-706.776 dDocent_Contig_9396 65 . A G 6583.51 . AB=0.242424;ABP=687.616;AC=2;AF=0.166667;AN=12;AO=384;CIGAR=1X;DP=3386;DPB=3386;DPRA=0;EPP=836.856;EPPR=6513.08;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.901042;PAIREDR=0.999666;PAO=0;PQA=0;PQR=0;PRO=0;QA=15125;QR=116700;RO=2998;RPL=384;RPP=836.856;RPPR=6513.08;RPR=0;RUN=1;SAF=384;SAP=836.856;SAR=0;SRF=2998;SRP=6513.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:466:451,14:451:17645:14:562:0,-89.2923,-1535.86 0/0:690:655,34:655:25377:34:1359:0,-84.9283,-2159.44 0/0:501:490,9:490:19076:9:367:0,-117.093,-1682.08 0/0:541:502,39:502:19495:39:1509:0,-26.816,-1617.1 0/1:591:440,151:440:17157:151:5958:-358.121,0,-1365 0/1:597:460,137:460:17950:137:5370:-303.452,0,-1434.52 dDocent_Contig_9397 14 . C T 118.658 . AB=0.137931;ABP=102.074;AC=1;AF=0.0833333;AN=12;AO=35;CIGAR=1X;DP=544;DPB=544;DPRA=1.4854;EPP=79.0118;EPPR=1108.29;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.998035;PAO=0;PQA=0;PQR=0;PRO=0;QA=1250;QR=20240;RO=509;RPL=0;RPP=79.0118;RPPR=1108.29;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=509;SRP=1108.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:52:49,3:49:1950:3:97:0,-6.60362,-166.649 0/0:122:114,8:114:4484:8:299:0,-9.46116,-376.242 0/0:146:134,12:134:5412:12:418:0,-6.00402,-448.953 0/1:87:75,12:75:2931:12:436:-13.3887,0,-237.694 0/0:72:72,0:72:2887:0:0:0,-21.6742,-259.928 0/0:65:65,0:65:2576:0:0:0,-19.5669,-231.978 dDocent_Contig_9398 41 . G A 295.316 . AB=0.261538;ABP=35.1147;AC=1;AF=0.1;AN=10;AO=29;CIGAR=1X;DP=314;DPB=314;DPRA=6.88636;EPP=65.983;EPPR=621.88;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1014;QR=11237;RO=285;RPL=0;RPP=65.983;RPPR=621.88;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=285;SRP=621.88;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:63:60,3:60:2368:3:100:0,-9.63512,-203.946 0/1:65:48,17:48:1919:17:560:-31.1336,0,-153.344 0/0:94:88,6:88:3459:6:234:0,-6.86621,-289.929 0/0:81:78,3:78:3077:3:120:0,-13.1957,-265.822 ./.:.:.:.:.:.:.:. 0/0:11:11,0:11:414:0:0:0,-3.31133,-37.5985 dDocent_Contig_9399 16 . T A 2359.33 . AB=0.0287356;ABP=338.665;AC=0;AF=0;AN=12;AO=5;CIGAR=8M1X3M;DP=378;DPB=400.25;DPRA=0;EPP=13.8677;EPPR=346.103;GTI=0;LEN=1;MEANALT=8.33333;MQM=60;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=203;QR=6129;RO=158;RPL=0;RPP=13.8677;RPPR=346.103;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=158;SRP=346.103;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:40:18,2,0,0,15,0,0,0,0,3:18:711:2,0,0,15,0,0,0,0,3:78,0,0,542,0,0,0,0,121:-38.8212,-37.8249,-95.7482,-44.2398,-96.3503,-102.763,-44.2398,-96.3503,-102.763,-102.763,0,-52.1247,-58.5371,-58.5371,-54.0216,-44.2398,-96.3503,-102.763,-102.763,-58.5371,-102.763,-44.2398,-96.3503,-102.763,-102.763,-58.5371,-102.763,-102.763,-44.2398,-96.3503,-102.763,-102.763,-58.5371,-102.763,-102.763,-102.763,-44.2398,-96.3503,-102.763,-102.763,-58.5371,-102.763,-102.763,-102.763,-102.763,-34.2585,-86.3736,-92.7863,-92.7863,-48.5601,-92.7863,-92.7863,-92.7863,-92.7863,-91.8832 0|0:81:17,22,12,0,27,0,0,1,0,0:17:665:22,12,0,27,0,0,1,0,0:817,406,0,1002,0,0,41,0,0:-89.0451,-27.3057,-75.3673,-61.2629,-49.0922,-112.331,-94.1626,-81.9899,-115.944,-148.844,-12.1688,0,-33.9574,-66.854,-58.7262,-94.1626,-81.9899,-115.944,-148.844,-66.854,-148.844,-94.1626,-81.9899,-115.944,-148.844,-66.854,-148.844,-148.844,-90.7779,-78.6052,-112.559,-145.46,-63.4692,-145.46,-145.46,-145.159,-94.1626,-81.9899,-115.944,-148.844,-66.854,-148.844,-148.844,-145.46,-148.844,-94.1626,-81.9899,-115.944,-148.844,-66.854,-148.844,-148.844,-145.46,-148.844,-148.844 0|0:94:43,7,5,0,23,1,3,2,0,1:43:1671:7,5,0,23,1,3,2,0,1:261,186,0,840,39,115,50,0,41:-55.6867,-47.2637,-182.48,-53.4062,-169.364,-189.224,-68.631,-184.587,-190.729,-205.953,0,-115.964,-122.105,-137.329,-130.405,-65.4245,-181.381,-187.523,-202.746,-134.123,-202.445,-59.1907,-175.148,-181.29,-196.513,-127.889,-193.307,-195.61,-64.7414,-180.696,-186.838,-202.061,-133.438,-198.855,-192.622,-201.459,-68.631,-184.587,-190.729,-205.953,-137.329,-202.746,-196.513,-202.061,-205.953,-65.2459,-181.203,-187.345,-202.568,-133.944,-199.362,-193.129,-198.677,-202.568,-202.267 0|0:88:59,7,6,0,10,0,0,5,0,0:59:2268:7,6,0,10,0,0,5,0,0:270,196,0,373,0,0,189,0,0:-12.7781,-8.36037,-192.445,-14.7273,-178.734,-199.101,-30.5388,-194.553,-200.908,-216.726,0,-164.017,-170.373,-186.191,-183.18,-30.5388,-194.553,-200.908,-216.726,-186.191,-216.726,-30.5388,-194.553,-200.908,-216.726,-186.191,-216.726,-216.726,-15.0454,-179.061,-185.416,-201.235,-170.699,-201.235,-201.235,-199.73,-30.5388,-194.553,-200.908,-216.726,-186.191,-216.726,-216.726,-201.235,-216.726,-30.5388,-194.553,-200.908,-216.726,-186.191,-216.726,-216.726,-201.235,-216.726,-216.726 0|0:35:8,0,0,10,8,5,1,3,0,0:8:315:0,0,10,8,5,1,3,0,0:0,0,375,290,177,38,110,0,0:-28.3118,-30.72,-56.6404,-30.72,-56.6404,-56.6404,0,-25.9244,-25.9244,-22.9141,-7.0452,-32.9668,-32.9668,-2.25222,-30.5586,-16.3059,-42.2265,-42.2265,-11.5119,-18.5548,-40.7214,-27.603,-53.5237,-53.5237,-22.8075,-29.8502,-39.1099,-53.2226,-21.731,-47.6519,-47.6519,-16.936,-23.9789,-33.2385,-44.5352,-46.7488,-30.72,-56.6404,-56.6404,-25.9244,-32.9668,-42.2265,-53.5237,-47.6519,-56.6404,-30.72,-56.6404,-56.6404,-25.9244,-32.9668,-42.2265,-53.5237,-47.6519,-56.6404,-56.6404 0|0:40:13,0,0,1,9,8,2,3,3,1:13:499:0,0,1,9,8,2,3,3,1:0,0,39,324,303,76,119,121,41:-22.5098,-26.4232,-67.3846,-26.4232,-67.3846,-67.3846,-23.2169,-64.1784,-64.1784,-63.8774,0,-40.9579,-40.9579,-37.7519,-38.2486,-1.5824,-42.5441,-42.5441,-39.3379,-16.1196,-40.1359,-20.1902,-61.1517,-61.1517,-57.9456,-34.7254,-36.3113,-60.5496,-16.625,-57.5872,-57.5872,-54.381,-31.1607,-32.7465,-51.3543,-56.6841,-16.4459,-57.4085,-57.4085,-54.2023,-30.9818,-32.5676,-51.1755,-47.6109,-56.5054,-23.038,-63.9997,-63.9997,-60.7936,-37.573,-39.1591,-57.7668,-54.2023,-54.0235,-63.6987 dDocent_Contig_9400 158 . C T 237.428 . AB=0.357143;ABP=7.97367;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X1M;DP=113;DPB=113;DPRA=1.40426;EPP=26.8965;EPPR=209.388;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.939394;PAO=0;PQA=0;PQR=0;PRO=0;QA=423;QR=3853;RO=99;RPL=11;RPP=26.8965;RPPR=209.388;RPR=0;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=217.986;SRR=99;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:29:28,1,0:28:1087:1,0:40,0:0,-4.73419,-94.1288,-8.42884,-94.4299,-97.7253 0|0:7:7,0,0:7:277:0,0:0,0:0,-2.10721,-25.3003,-2.10721,-25.3003,-25.3003 0|1:9:3,0,6:3:119:0,6:0,227:-18.0839,-18.987,-28.7891,0,-10.1923,-8.38612 0|1:19:15,0,4:15:594:0,4:0,158:-8.8807,-13.3962,-62.2872,0,-49.2859,-48.0817 0|0:38:35,2,1:35:1347:2,1:71,38:0,-4.76844,-114.745,-7.41123,-112.23,-117.712 0|0:11:11,0,0:11:429:0,0:0,0:0,-3.31133,-38.9594,-3.31133,-38.9594,-38.9594 dDocent_Contig_9401 29 . G T 66.6399 . AB=0.190476;ABP=20.4855;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=271;DPB=271;DPRA=0.921986;EPP=26.8965;EPPR=567.593;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0;PAIREDR=0.446154;PAO=0;PQA=0;PQR=0;PRO=0;QA=443;QR=10364;RO=260;RPL=0;RPP=26.8965;RPPR=567.593;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=260;SRP=567.593;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:36,2:36:1443:2:82:0,-3.65946,-122.341 0/0:71:66,5:66:2658:5:204:0,-2.6291,-220.596 0/0:31:31,0:31:1239:0:0:0,-9.33193,-111.784 0/0:58:58,0:58:2299:0:0:0,-17.4597,-207.064 0/1:21:17,4:17:681:4:157:-8.18687,0,-55.2947 0/0:52:52,0:52:2044:0:0:0,-15.6536,-184.15 dDocent_Contig_9403 102 . T C 209.45 . AB=0.25;ABP=22.5536;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=170;DPB=170;DPRA=1.34328;EPP=22.5536;EPPR=352.617;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.695652;PAO=0;PQA=0;PQR=0;PRO=0;QA=366;QR=6368;RO=161;RPL=9;RPP=22.5536;RPPR=352.617;RPR=0;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=352.617;SRR=161;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1118:0:0:0,-8.42884,-100.902 0/0:21:21,0:21:846:0:0:0,-6.32163,-76.4526 0/0:11:11,0:11:422:0:0:0,-3.31133,-38.3235 0/0:42:42,0:42:1673:0:0:0,-12.6433,-150.797 0/0:32:32,0:32:1239:0:0:0,-9.63296,-111.771 0/1:36:27,9:27:1070:9:366:-22.4679,0,-85.7523 dDocent_Contig_9404 9 . T C 1275.22 . AB=0.182573;ABP=424.853;AC=5;AF=0.416667;AN=12;AO=98;CIGAR=1X;DP=622;DPB=622;DPRA=0;EPP=215.815;EPPR=1140.86;GTI=0;LEN=1;MEANALT=1;MQM=40.0204;MQMR=41.084;NS=6;NUMALT=1;ODDS=0;PAIRED=0.714286;PAIREDR=0.973282;PAO=0;PQA=0;PQR=0;PRO=0;QA=3784;QR=20191;RO=524;RPL=0;RPP=215.815;RPPR=1140.86;RPR=98;RUN=1;SAF=98;SAP=215.815;SAR=0;SRF=524;SRP=1140.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:44:38,6:38:1465:6:231:-5.96283,0,-109.717 0/1:91:73,18:73:2811:18:702:-31.2399,0,-206.88 0/1:111:86,25:86:3282:25:966:-46.4867,0,-245.308 0/1:95:73,22:73:2840:22:852:-40.5949,0,-212.931 0/1:141:124,17:124:4799:17:649:-12.4595,0,-361.471 0/0:140:130,10:130:4994:10:384:0,-10.2618,-388.779 dDocent_Contig_9405 41 . T G 42.7477 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=526;DPB=526;DPRA=0.615504;EPP=35.5824;EPPR=1112.63;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=603;QR=20618;RO=511;RPL=0;RPP=35.5824;RPPR=1112.63;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=511;SRP=1112.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:47:46,1:46:1824:1:40:0,-10.1527,-160.374 0/0:129:129,0:129:5199:0:0:0,-38.8329,-467.753 0/0:108:101,7:101:4106:7:281:0,-6.84964,-343.822 0/0:129:127,2:127:5127:2:81:0,-31.1471,-453.587 0/0:112:108,4:108:4362:4:163:0,-18.6569,-377.432 1/1:1:0,1:0:0:1:38:-3.79727,-0.30103,0 dDocent_Contig_9406 149 . G T 353.563 . AB=0.615385;ABP=4.51363;AC=3;AF=0.25;AN=12;AO=26;CIGAR=1X;DP=185;DPB=185;DPRA=0.8;EPP=59.4686;EPPR=348.274;GTI=0;LEN=1;MEANALT=1;MQM=24.7692;MQMR=58.1572;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.993711;PAO=0;PQA=0;PQR=0;PRO=0;QA=1048;QR=6202;RO=159;RPL=0;RPP=59.4686;RPPR=348.274;RPR=26;RUN=1;SAF=0;SAP=59.4686;SAR=26;SRF=0;SRP=348.274;SRR=159;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:52:49,3:49:1875:3:123:0,-8.68363,-161.976 0/0:37:37,0:37:1444:0:0:0,-11.1381,-130.203 0/0:54:50,4:50:1974:4:163:0,-7.31971,-166.804 0/0:19:18,1:18:710:1:41:0,-3.23031,-57.7189 1/1:10:0,10:0:0:10:403:-22.3645,-3.0103,0 0/1:13:5,8:5:199:8:318:-14.2137,0,-14.375 dDocent_Contig_9407 33 . T A 583.939 . AB=0.153191;ABP=248.516;AC=1;AF=0.0833333;AN=12;AO=44;CIGAR=1X;DP=522;DPB=522;DPRA=10.2824;EPP=98.5551;EPPR=1038.8;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.989518;PAO=0;PQA=0;PQR=0;PRO=0;QA=1775;QR=19105;RO=477;RPL=0;RPP=98.5551;RPPR=1038.8;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=477;SRP=1038.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:896:0:0:0,-6.92369,-80.935 0/0:27:27,0:27:1076:0:0:0,-8.12781,-97.1235 0/0:3:3,0:3:123:0:0:0,-0.90309,-11.4648 0/0:32:32,0:32:1280:0:0:0,-9.63296,-115.463 0/0:202:193,8:193:7760:8:326:0,-31.2063,-668.262 0/1:235:199,36:199:7970:36:1449:-59.9167,0,-646.089 dDocent_Contig_9408 7 . A C 1976.08 . AB=0.340426;ABP=75.7777;AC=6;AF=0.5;AN=12;AO=112;CIGAR=1X;DP=329;DPB=329;DPRA=0;EPP=246.215;EPPR=474.22;GTI=0;LEN=1;MEANALT=1;MQM=37.7589;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.598214;PAIREDR=0.806452;PAO=0;PQA=0;PQR=0;PRO=0;QA=4309;QR=8293;RO=217;RPL=0;RPP=246.215;RPPR=474.22;RPR=112;RUN=1;SAF=112;SAP=246.215;SAR=0;SRF=217;SRP=474.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:15,13:15:561:13:504:-24.6831,0,-42.4004 0/1:66:41,25:41:1576:25:956:-56.4046,0,-122.241 0/1:54:47,7:47:1819:7:267:-6.72463,0,-147.704 0/1:45:28,17:28:1074:17:653:-27.1691,0,-83.4179 0/1:65:40,25:40:1509:25:969:-52.3559,0,-116.517 0/1:71:46,25:46:1754:25:960:-41.4922,0,-136.743 dDocent_Contig_9409 15 . G T 322.522 . AB=0.134831;ABP=209.178;AC=1;AF=0.0833333;AN=12;AO=66;CIGAR=1X;DP=1643;DPB=1643;DPRA=0.58664;EPP=146.327;EPPR=3427.42;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2653;QR=62798;RO=1577;RPL=0;RPP=146.327;RPPR=3427.42;RPR=66;RUN=1;SAF=66;SAP=146.327;SAR=0;SRF=1577;SRP=3427.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:178:154,24:154:6123:24:964:-33.4736,0,-497.271 0/0:227:213,14:213:8509:14:557:0,-17.8637,-714.851 0/0:227:220,7:220:8747:7:285:0,-42.3094,-760.709 0/0:255:234,21:234:9325:21:847:0,-0.2196,-762.151 0/0:372:372,0:372:14819:0:0:0,-111.983,-1332.57 0/0:384:384,0:384:15275:0:0:0,-115.596,-1373.58 dDocent_Contig_9410 209 . N G 203.984 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=208;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:89:-8.29756,-0.90309,0 1/1:2:0,2:0:0:2:78:-7.4033,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 dDocent_Contig_9411 98 . A G 124.154 . AB=0.214286;ABP=22.8638;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=159;DPB=159;DPRA=1.0687;EPP=16.0391;EPPR=335.246;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=0.5;PAIREDR=0.627451;PAO=0;PQA=0;PQR=0;PRO=0;QA=241;QR=6155;RO=153;RPL=6;RPP=16.0391;RPPR=335.246;RPR=0;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=335.246;SRR=153;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:22,6:22:879:6:241:-13.6373,0,-70.9856 0/0:23:23,0:23:904:0:0:0,-6.92369,-81.6645 0/0:11:11,0:11:450:0:0:0,-3.31133,-40.8558 0/0:35:35,0:35:1419:0:0:0,-10.536,-127.957 0/0:28:28,0:28:1126:0:0:0,-8.42884,-101.618 0/0:34:34,0:34:1377:0:0:0,-10.235,-124.184 dDocent_Contig_9412 18 . C A 6312.21 . AB=0.040404;ABP=184.646;AC=0;AF=0;AN=12;AO=4;CIGAR=1M3D1X1M1X;DP=299;DPB=211.571;DPRA=1.03125;EPP=11.6962;EPPR=207.129;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.680851;PAO=0;PQA=0;PQR=0;PRO=0;QA=161;QR=3597;RO=94;RPL=0;RPP=11.6962;RPPR=207.129;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=94;SRP=207.129;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:39:14,0,24:14:540:0,24:0,966:-75.518,-79.7324,-124.075,0,-44.6107,-37.386 0|0:59:15,2,42:15:573:2,42:79,1651:-130.008,-128.022,-174.427,0,-40.4948,-34.3537 0|0:48:0,0,48:0:0:0,48:0,1919:-172.015,-172.015,-172.015,-14.4494,-14.4494,0 0|0:59:23,0,36:23:876:0,36:0,1436:-110.13,-117.054,-188.9,0,-72.2322,-61.3952 0|0:40:19,2,19:19:733:2,19:82,757:-56.354,-55.3042,-114.889,0,-53.3998,-54.4507 0|0:54:23,0,31:23:875:0,31:0,1249:-96.4184,-103.342,-175.09,0,-72.1372,-62.8053 dDocent_Contig_9413 58 . A G 266.256 . AB=0.139665;ABP=204.884;AC=3;AF=0.25;AN=12;AO=25;CIGAR=1X;DP=318;DPB=318;DPRA=1.28777;EPP=57.2971;EPPR=637.08;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.68;PAIREDR=0.599315;PAO=0;PQA=0;PQR=0;PRO=0;QA=934;QR=11046;RO=292;RPL=15;RPP=5.18177;RPPR=16.1284;RPR=10;RUN=1;SAF=15;SAP=5.18177;SAR=10;SRF=167;SRP=16.1284;SRR=125;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:55:47,8:47:1764:8:294:-10.2521,0,-142.448 0/1:85:72,13:72:2734:13:498:-19.5781,0,-220.639 0/0:32:32,0:32:1238:0:0:0,-9.63296,-111.702 0/1:39:35,4:35:1339:4:142:-1.38358,0,-109.049 0/0:50:50,0:50:1870:0:0:0,-15.0515,-168.522 0/0:57:56,0:56:2101:0:0:0,-16.8577,-189.148 dDocent_Contig_9414 51 . A G 147.094 . AB=0.153846;ABP=70.66;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=212;DPB=212;DPRA=1.01905;EPP=26.8965;EPPR=439.476;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.0909091;PAIREDR=0.61194;PAO=0;PQA=0;PQR=0;PRO=0;QA=434;QR=7916;RO=201;RPL=11;RPP=26.8965;RPPR=430.834;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=200;SRP=430.834;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:947:0:0:0,-7.22472,-85.5268 0/0:42:41,1:41:1628:1:41:0,-8.54869,-142.658 0/1:28:21,7:21:820:7:270:-16.2308,0,-65.6804 0/1:37:34,3:34:1354:3:123:-0.326678,0,-110.979 0/0:37:37,0:37:1434:0:0:0,-11.1381,-129.311 0/0:44:44,0:44:1733:0:0:0,-13.2453,-156.187 dDocent_Contig_9415 32 . T A 314.957 . AB=0.108647;ABP=602.977;AC=3;AF=0.25;AN=12;AO=76;CIGAR=1X3M1X;DP=872;DPB=872;DPRA=6.25926;EPP=168.042;EPPR=1724.99;GTI=0;LEN=1;MEANALT=1.6;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998739;PAO=0;PQA=0;PQR=0;PRO=0;QA=2927;QR=31037;RO=793;RPL=0;RPP=168.042;RPPR=1724.99;RPR=76;RUN=1;SAF=76;SAP=168.042;SAR=0;SRF=793;SRP=1724.99;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:104:93,11:93:3607:11:432:-7.92801,0,-293.398 0|1:254:232,22:232:9096:22:853:-0.626436,0,-741.764 0|0:158:146,11:146:5744:11:416:0,-9.87371,-479.052 0|0:236:218,16:218:8521:16:621:0,-14.6186,-710.301 0|1:93:77,16:77:3001:16:605:-26.7865,0,-242.222 0|0:27:27,0:27:1068:0:0:0,-8.12781,-96.4174 dDocent_Contig_9416 12 . A G 10364.8 . AB=0.330802;ABP=297.673;AC=6;AF=0.5;AN=12;AO=392;CIGAR=1X;DP=1185;DPB=1185;DPRA=0;EPP=854.227;EPPR=1690.42;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9369;NS=6;NUMALT=1;ODDS=0;PAIRED=0.992347;PAIREDR=0.984868;PAO=0;PQA=0;PQR=0;PRO=0;QA=15596;QR=31441;RO=793;RPL=0;RPP=854.227;RPPR=1724.99;RPR=392;RUN=1;SAF=392;SAP=854.227;SAR=0;SRF=789;SRP=1690.42;SRR=4;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:121:94,27:94:3715:27:1061:-59.3532,0,-297.947 0/1:169:134,35:134:5323:35:1406:-75.9192,0,-428.055 0/1:127:99,28:99:3950:28:1114:-62.311,0,-317.265 0/1:240:187,53:187:7392:53:2112:-118.019,0,-592.648 0/1:334:160,174:160:6346:174:6949:-524.533,0,-469.978 0/1:194:119,75:119:4715:75:2954:-207.564,0,-365.878 dDocent_Contig_9417 63 . C T 1470.1 . AB=0.270742;ABP=107.554;AC=2;AF=0.2;AN=10;AO=65;CIGAR=1X;DP=435;DPB=435;DPRA=1.6168;EPP=144.156;EPPR=804.284;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2551;QR=14399;RO=369;RPL=65;RPP=144.156;RPPR=804.284;RPR=0;RUN=1;SAF=65;SAP=144.156;SAR=0;SRF=369;SRP=804.284;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:57:57,0:57:2220:0:0:0,-17.1587,-199.97 0/0:79:76,3:76:2946:3:120:0,-12.5937,-254.052 0/1:102:55,47:55:2118:47:1846:-135.649,0,-160.092 0/1:127:111,15:111:4319:15:585:-14.6623,0,-350.357 ./.:.:.:.:.:.:.:. 0/0:70:70,0:70:2796:0:0:0,-21.0721,-251.758 dDocent_Contig_9418 109 . A G 531.704 . AB=0.26506;ABP=42.8032;AC=2;AF=0.166667;AN=12;AO=24;CIGAR=1X;DP=200;DPB=200;DPRA=1.22222;EPP=55.1256;EPPR=385.189;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.875;PAIREDR=0.761364;PAO=0;PQA=0;PQR=0;PRO=0;QA=967;QR=6383;RO=176;RPL=24;RPP=55.1256;RPPR=385.189;RPR=0;RUN=1;SAF=0;SAP=55.1256;SAR=24;SRF=0;SRP=385.189;SRR=176;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:25,2:25:902:2:81:0,-0.442076,-73.8031 0/0:47:47,0:47:1717:0:0:0,-14.1484,-154.799 0/0:15:15,0:15:526:0:0:0,-4.51545,-47.6587 0/0:28:28,0:28:1028:0:0:0,-8.42884,-92.8276 0/1:34:31,3:31:1071:3:118:-0.766562,0,-86.4497 0/1:49:30,19:30:1139:19:768:-54.6888,0,-88.0606 dDocent_Contig_9420 20 . G A 1595.78 . AB=0.237179;ABP=190.202;AC=6;AF=0.5;AN=12;AO=74;CIGAR=1X;DP=312;DPB=312;DPRA=0;EPP=163.699;EPPR=519.821;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9706;NS=6;NUMALT=1;ODDS=0;PAIRED=0.581081;PAIREDR=0.836134;PAO=0;PQA=0;PQR=0;PRO=0;QA=2901;QR=9442;RO=238;RPL=0;RPP=163.699;RPPR=519.821;RPR=74;RUN=1;SAF=74;SAP=163.699;SAR=0;SRF=238;SRP=519.821;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:57:43,14:43:1703:14:560:-33.5847,0,-136.346 0/1:56:42,14:42:1678:14:548:-32.7992,0,-134.373 0/1:33:30,3:30:1201:3:111:-0.417749,0,-98.4332 0/1:62:46,16:46:1816:16:613:-36.8244,0,-144.997 0/1:65:56,9:56:2212:9:356:-12.8333,0,-179.69 0/1:39:21,18:21:832:18:713:-52.7561,0,-63.4587 dDocent_Contig_9421 37 . C A 4985.83 . AB=0.228338;ABP=631.85;AC=4;AF=0.333333;AN=12;AO=239;CIGAR=1X;DP=2143;DPB=2143;DPRA=0.557244;EPP=521.992;EPPR=4135.32;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999475;PAO=0;PQA=0;PQR=0;PRO=0;QA=9471;QR=76065;RO=1903;RPL=0;RPP=521.992;RPPR=4135.32;RPR=239;RUN=1;SAF=239;SAP=521.992;SAR=0;SRF=1903;SRP=4135.32;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:267:177,89:177:7063:89:3556:-239.759,0,-555.019 0/1:247:191,56:191:7602:56:2205:-124.266,0,-609.441 0/1:53:36,17:36:1427:17:672:-44.856,0,-112.725 0/1:414:352,62:352:14114:62:2460:-96.9234,0,-1144.54 0/0:566:566,0:566:22632:0:0:0,-170.383,-2034.88 0/0:596:581,15:581:23227:15:578:0,-127.063,-2036 dDocent_Contig_9422 15 . A T 7476.81 . AB=0.477064;ABP=5.50052;AC=6;AF=0.5;AN=12;AO=260;CIGAR=1X;DP=545;DPB=545;DPRA=0;EPP=567.593;EPPR=619.708;GTI=0;LEN=1;MEANALT=1.16667;MQM=54.7308;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.546154;PAIREDR=0.450704;PAO=0;PQA=0;PQR=0;PRO=0;QA=10396;QR=11260;RO=284;RPL=0;RPP=567.593;RPPR=619.708;RPR=260;RUN=1;SAF=260;SAP=567.593;SAR=0;SRF=284;SRP=619.708;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:70:27,42:27:1077:42:1669:-127.639,0,-76.0373 0/1:108:49,59:49:1875:59:2365:-176.297,0,-136.442 0/1:65:35,30:35:1405:30:1193:-86.1908,0,-107.131 0/1:141:71,70:71:2846:70:2809:-206.204,0,-213.797 0/1:61:38,23:38:1507:23:916:-63.7736,0,-117.511 0/1:100:64,36:64:2550:36:1444:-98.7986,0,-199.524 dDocent_Contig_9423 51 . T A 1436.66 . AB=0.352381;ABP=22.8844;AC=5;AF=0.416667;AN=12;AO=50;CIGAR=1X;DP=308;DPB=308;DPRA=0.310526;EPP=111.584;EPPR=563.25;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1990;QR=8536;RO=258;RPL=50;RPP=111.584;RPPR=563.25;RPR=0;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=258;SRP=563.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:27:16,11:16:639:11:438:-31.6471,0,-49.7183 0/1:45:37,8:37:1423:8:318:-15.4409,0,-114.78 1/1:13:0,13:0:0:13:517:-46.8771,-3.91339,0 0/1:33:15,18:15:601:18:717:-54.9224,0,-44.494 0/0:120:120,0:120:3707:0:0:0,-36.1236,-333.834 0/0:70:70,0:70:2166:0:0:0,-21.0721,-195.198 dDocent_Contig_9424 26 . T A 169.311 . AB=0.5;ABP=3.0103;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=170;DPB=170;DPRA=0.379747;EPP=16.0391;EPPR=359.132;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.963415;PAO=0;PQA=0;PQR=0;PRO=0;QA=241;QR=6524;RO=164;RPL=0;RPP=16.0391;RPPR=359.132;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=164;SRP=359.132;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:32,0:32:1251:0:0:0,-9.63296,-112.855 0/0:51:51,0:51:2018:0:0:0,-15.3525,-181.805 0/0:14:14,0:14:564:0:0:0,-4.21442,-51.1017 0/0:40:40,0:40:1601:0:0:0,-12.0412,-144.324 0/0:21:21,0:21:851:0:0:0,-6.32163,-76.9013 0/1:12:6,6:6:239:6:241:-18.4539,0,-18.2719 dDocent_Contig_9425 9 . T C 146.984 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=5;CIGAR=2X;DP=278;DPB=278;DPRA=1.27473;EPP=13.8677;EPPR=556.736;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.2;PAIREDR=0.972549;PAO=0;PQA=0;PQR=0;PRO=0;QA=180;QR=9935;RO=255;RPL=0;RPP=13.8677;RPPR=556.736;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=255;SRP=556.736;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:32:29,0,3:29:1121:0,3:0,118:-1.36924,-10.0991,-102.161,0,-92.4539,-91.5509 0|0:51:51,0,0:51:1968:0,0:0,0:0,-15.3525,-177.344,-15.3525,-177.344,-177.344 0|0:58:49,0,9:49:1932:0,9:0,351:-14.4911,-29.2415,-188.203,0,-159.351,-156.642 0|0:39:35,0,4:35:1372:0,4:0,164:-3.40973,-13.9458,-126.757,0,-113.219,-112.015 0|0:40:40,0,0:40:1560:0,0:0,0:0,-12.0412,-140.659,-12.0412,-140.659,-140.659 0|0:58:51,5,0:51:1982:5,0:180,0:0,-0.686176,-162.052,-15.3525,-163.557,-178.235 dDocent_Contig_9426 1 . N A 2166.66 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=62;CIGAR=1X;DP=62;DPB=62;DPRA=0;EPP=137.642;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=54.5806;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.983871;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2405;QR=0;RO=0;RPL=0;RPP=137.642;RPPR=0;RPR=62;RUN=1;SAF=62;SAP=137.642;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:7:0,7:0:0:7:274:-24.9233,-2.10721,0 1/1:12:0,12:0:0:12:466:-41.0948,-3.61236,0 1/1:11:0,11:0:0:11:417:-37.2077,-3.31133,0 1/1:16:0,16:0:0:16:626:-56.1306,-4.81648,0 1/1:10:0,10:0:0:10:388:-35.1005,-3.0103,0 1/1:6:0,6:0:0:6:234:-21.4305,-1.80618,0 dDocent_Contig_9427 14 . G A 1487.51 . AB=0.189055;ABP=340.615;AC=6;AF=0.5;AN=12;AO=76;CIGAR=2M1X;DP=402;DPB=394;DPRA=0;EPP=168.042;EPPR=656.623;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.776316;PAIREDR=0.714286;PAO=0;PQA=0;PQR=0;PRO=0;QA=3013;QR=11784;RO=301;RPL=0;RPP=168.042;RPPR=656.623;RPR=76;RUN=1;SAF=76;SAP=168.042;SAR=0;SRF=301;SRP=656.623;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:56:49,0,7:49:1876:0,7:0,279:-8.6231,-23.3736,-177.285,0,-154.308,-152.201 0|1:67:50,0,17:50:1959:0,17:0,678:-41.1801,-56.2316,-217.309,0,-161.474,-156.356 0|1:73:63,1,9:63:2446:1,9:41,357:-10.407,-25.9864,-226.634,0,-197.55,-198.225 0|1:72:65,0,6:65:2579:0,6:0,240:-0.193369,-19.7603,-232.051,0,-212.282,-210.476 0|1:51:27,10,14:27:1060:10,14:394,549:-37.0123,-12.7281,-96.8934,0,-54.7626,-82.9598 0|1:83:47,13,23:47:1864:13,23:493,910:-60.7491,-34.4861,-184.007,0,-113.034,-146.523 dDocent_Contig_9428 7 . A T 1148.5 . AB=0.222656;ABP=174.048;AC=3;AF=0.25;AN=12;AO=61;CIGAR=1X;DP=455;DPB=455;DPRA=2.4;EPP=135.47;EPPR=849.885;GTI=0;LEN=1;MEANALT=1.6;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0655738;PAIREDR=0.384615;PAO=0;PQA=0;PQR=0;PRO=0;QA=2313;QR=14798;RO=390;RPL=0;RPP=135.47;RPPR=849.885;RPR=61;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=390;SRP=849.885;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:90:80,10:80:3028:10:384:-7.82339,0,-245.603 0/0:69:65,3:65:2460:3:117:0,-9.78457,-210.753 0/1:93:56,35:56:2146:35:1329:-92.1118,0,-165.584 0/1:73:61,12:61:2300:12:464:-20.1365,0,-185.249 0/0:35:35,0:35:1337:0:0:0,-10.536,-120.619 0/0:95:93,1:93:3527:1:19:0,-26.6767,-315.571 dDocent_Contig_9429 18 . G A 339.135 . AB=0.382353;ABP=7.09778;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=114;DPB=114;DPRA=0.85;EPP=31.2394;EPPR=222.329;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=518;QR=3910;RO=101;RPL=0;RPP=31.2394;RPPR=222.329;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=101;SRP=222.329;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:789:0:0:0,-6.0206,-71.3323 0/1:19:9,10:9:354:10:396:-30.2783,0,-26.5016 0/0:15:15,0:15:571:0:0:0,-4.51545,-51.7253 0/1:15:12,3:12:470:3:122:-6.85704,0,-38.1367 0/0:26:26,0:26:995:0:0:0,-7.82678,-89.8498 0/0:19:19,0:19:731:0:0:0,-5.71957,-66.1126 dDocent_Contig_9430 23 . G T 103.381 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=2;CIGAR=1X5M1X5M2X;DP=171;DPB=171;DPRA=1.53947;EPP=7.35324;EPPR=330.903;GTI=0;LEN=1;MEANALT=4;MQM=21;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=42;QR=5823;RO=151;RPL=0;RPP=7.35324;RPPR=330.903;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=151;SRP=330.903;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:25:24,0,0,0:24:930:0,0,0:0,0,0:0,-7.22472,-83.8234,-7.22472,-83.8234,-83.8234,-7.22472,-83.8234,-83.8234,-83.8234 0|0:29:27,0,0,2:27:1061:0,0,2:0,0,74:0,-8.12781,-95.4183,-8.12781,-95.4183,-95.4183,-1.70501,-89.3668,-89.3668,-88.7648 0|0:20:12,4,0,4:12:454:4,0,4:155,0,159:-9.61236,-9.88646,-45.879,-13.2247,-47.0831,-50.5044,0,-33.9872,-37.397,-36.1929 0|0:36:32,0,0,4:32:1224:0,0,4:0,0,160:-3.94672,-13.5797,-113.991,-13.5797,-113.991,-113.991,0,-100.809,-100.809,-99.6045 0|0:22:22,0,0,0:22:836:0,0,0:0,0,0:0,-6.62266,-75.5549,-6.62266,-75.5549,-75.5549,-6.62266,-75.5549,-75.5549,-75.5549 0|0:39:34,0,2,1:34:1318:0,2,1:0,42,40:0,-10.235,-118.633,-7.64101,-116.004,-115.402,-6.90201,-115.337,-112.708,-115.036 dDocent_Contig_9431 25 . A T 109.178 . AB=0.134328;ABP=80.8268;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=407;DPB=407;DPRA=1.09506;EPP=31.2394;EPPR=858.57;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.538462;PAIREDR=0.746193;PAO=0;PQA=0;PQR=0;PRO=0;QA=516;QR=15759;RO=394;RPL=0;RPP=31.2394;RPPR=858.57;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=394;SRP=858.57;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:67:58,9:58:2330:9:355:-12.1397,0,-189.687 0/0:71:71,0:71:2856:0:0:0,-21.3731,-257.14 0/0:41:41,0:41:1656:0:0:0,-12.3422,-149.264 0/0:82:82,0:82:3249:0:0:0,-24.6845,-292.483 0/0:69:69,0:69:2752:0:0:0,-20.7711,-247.8 0/0:77:73,4:73:2916:4:161:0,-8.30403,-247.666 dDocent_Contig_9432 9 . T A 90.7068 . AB=0.121951;ABP=104.805;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=488;DPB=488;DPRA=1.00985;EPP=24.725;EPPR=1040.97;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.924686;PAO=0;PQA=0;PQR=0;PRO=0;QA=388;QR=18250;RO=478;RPL=0;RPP=24.725;RPPR=1040.97;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=478;SRP=1040.97;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:65:65,0:65:2471:0:0:0,-19.5669,-222.596 0/0:76:76,0:76:2912:0:0:0,-22.8783,-262.246 0/0:69:69,0:69:2606:0:0:0,-20.7711,-234.737 0/0:97:97,0:97:3710:0:0:0,-29.1999,-334.012 0/0:99:99,0:99:3772:0:0:0,-29.802,-339.594 0/1:82:72,10:72:2779:10:388:-10.5936,0,-225.603 dDocent_Contig_9433 22 . G A 412.408 . AB=0.5;ABP=3.0103;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=602;DPB=602;DPRA=1.0481;EPP=35.5824;EPPR=1277.66;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.868825;PAO=0;PQA=0;PQR=0;PRO=0;QA=606;QR=23206;RO=587;RPL=0;RPP=35.5824;RPPR=1277.66;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=587;SRP=1277.66;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:81:81,0:81:3199:0:0:0,-24.3834,-287.988 0/0:179:178,1:178:7020:1:41:0,-49.7898,-627.403 0/0:77:77,0:77:3070:0:0:0,-23.1793,-276.374 0/0:145:145,0:145:5733:0:0:0,-43.6493,-515.791 0/1:28:14,14:14:540:14:565:-42.7637,0,-40.5067 0/0:92:92,0:92:3644:0:0:0,-27.6948,-327.989 dDocent_Contig_9434 10 . G A 496.795 . AB=0.205128;ABP=91.3725;AC=2;AF=0.166667;AN=12;AO=29;CIGAR=1X;DP=399;DPB=399;DPRA=0.927536;EPP=65.983;EPPR=806.455;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.972973;PAO=0;PQA=0;PQR=0;PRO=0;QA=1163;QR=14714;RO=370;RPL=0;RPP=65.983;RPPR=806.455;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=370;SRP=806.455;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:116:116,0:116:4626:0:0:0,-34.9195,-416.261 0/1:107:92,15:92:3628:15:610:-23.027,0,-294.347 0/0:75:70,5:70:2798:5:204:0,-3.83322,-233.182 0/0:81:81,0:81:3221:0:0:0,-24.3834,-289.956 0/1:10:1,9:1:39:9:349:-28.755,0,-0.886264 0/0:10:10,0:10:402:0:0:0,-3.0103,-36.5402 dDocent_Contig_9435 107 . N G 1988.81 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=65;CIGAR=2X1I5M;DP=65;DPB=74.2857;DPRA=0;EPP=144.156;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2183;QR=0;RO=0;RPL=0;RPP=144.156;RPPR=0;RPR=65;RUN=1;SAF=0;SAP=144.156;SAR=65;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:9:0,9:0:0:9:303:-27.5976,-2.70927,0 1|1:10:0,10:0:0:10:336:-30.566,-3.0103,0 1|1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1|1:44:0,44:0:0:44:1475:-133.041,-13.2453,0 .:.:.:.:.:.:.:. 1|1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_9436 8 . C T 1425.49 . AB=0.182482;ABP=362.92;AC=1;AF=0.0833333;AN=12;AO=76;CIGAR=2M1X;DP=2172;DPB=2160.67;DPRA=1.1708;EPP=168.042;EPPR=4469.73;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2903;QR=78623;RO=2057;RPL=0;RPP=168.042;RPPR=4469.73;RPR=76;RUN=1;SAF=76;SAP=168.042;SAR=0;SRF=2057;SRP=4469.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:391:388,0,1:388:14838:0,1:0,39:0,-116.8,-1334.41,-113.57,-1331.21,-1330.91 0|0:573:572,1,0:572:21826:1,0:39,0:0,-168.594,-1959.3,-172.189,-1959.6,-1962.81 0|0:149:149,0,0:149:5671:0,0:0,0:0,-44.8535,-510.374,-44.8535,-510.374,-510.374 0|0:325:324,0,0:324:12371:0,0:0,0:0,-97.5337,-1112.69,-97.5337,-1112.69,-1112.69 0|0:323:322,0,0:322:12344:0,0:0,0:0,-96.9317,-1110.07,-96.9317,-1110.07,-1110.07 0|1:411:302,33,75:302:11573:33,75:1261,2864:-144.072,-131.515,-1071.42,0,-846.369,-927.259 dDocent_Contig_9437 50 . A T 908.698 . AB=0.0727273;ABP=177.439;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X1M1D2M1X1M1X;DP=273;DPB=265.5;DPRA=0;EPP=20.3821;EPPR=461.191;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.436019;PAO=0;PQA=0;PQR=0;PRO=0;QA=294;QR=7690;RO=211;RPL=8;RPP=20.3821;RPPR=461.191;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=211;SRP=461.191;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:17:14,0,3:14:513:0,3:0,100:-4.21302,-8.42744,-50.3839,0,-42.2955,-41.3924 0|0:46:37,0,9:37:1332:0,9:0,305:-13.9302,-25.0683,-133.767,0,-109.041,-106.332 0|0:39:34,0,5:34:1258:0,5:0,189:-5.63578,-15.8708,-118.773,0,-103.279,-101.774 0|0:61:40,0,21:40:1449:0,21:0,785:-52.6142,-64.6554,-182.94,0,-118.654,-112.332 0|1:45:32,7,4:32:1170:7,4:258,143:-11.4946,0,-93.5408,-9.46206,-83.9885,-103.885 0|0:65:54,1,10:54:1968:1,10:36,372:-14.2034,-27.5227,-187.972,0,-157.824,-157.751 dDocent_Contig_9438 57 . G T 528.149 . AB=0.14786;ABP=279.818;AC=4;AF=0.333333;AN=12;AO=43;CIGAR=1X;DP=424;DPB=424;DPRA=0;EPP=96.3836;EPPR=828.17;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.651163;PAIREDR=0.642105;PAO=0;PQA=0;PQR=0;PRO=0;QA=1709;QR=14784;RO=380;RPL=43;RPP=96.3836;RPPR=828.17;RPR=0;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=380;SRP=828.17;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:29,4:29:1149:4:161:-4.7965,0,-93.6679 0/1:83:71,12:71:2780:12:479:-18.4739,0,-225.329 0/1:64:56,8:56:2215:8:310:-8.99212,0,-180.259 0/1:76:62,14:62:2399:14:559:-27.7741,0,-193.204 0/0:51:50,1:50:1904:1:41:0,-11.258,-167.469 0/0:116:112,4:112:4337:4:159:0,-20.2287,-375.633 dDocent_Contig_9441 13 . G A 3917.95 . AB=0.0882353;ABP=53.0819;AC=0;AF=0;AN=12;AO=3;CIGAR=6M1X;DP=536;DPB=433.714;DPRA=0;EPP=9.52472;EPPR=765.197;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.951567;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=13604;RO=351;RPL=0;RPP=9.52472;RPPR=765.197;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=351;SRP=765.197;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:102:40,11,51,0:40:1541:11,51,0:429,1890,0:-142.572,-119.345,-242.569,0,-91.2592,-111.172,-154.613,-245.88,-126.525,-281.146 0|0:153:120,1,29,0:120:4669:1,29,0:37,1059,0:-50.3706,-83.4671,-466.89,0,-380.682,-374.979,-86.4942,-467.191,-383.708,-470.218 0|0:85:64,0,21,0:64:2483:0,21,0:0,784,0:-45.293,-64.5589,-268.572,0,-204.39,-198.068,-64.5589,-268.572,-204.39,-268.572 0|0:128:71,0,57,0:71:2752:0,57,0:0,2129,0:-153.317,-174.69,-400.784,0,-226.473,-209.314,-174.69,-400.784,-226.473,-400.784 0|0:34:30,0,4,0:30:1145:0,4,0:0,155,0:-4.09042,-13.1213,-107.051,0,-94.316,-93.1119,-13.1213,-107.051,-94.316,-107.051 0|0:34:26,0,5,3:26:1014:0,5,3:0,186,123:-7.37382,-15.2006,-98.552,0,-83.3307,-81.8256,-5.03422,-88.3977,-73.1764,-87.4946 dDocent_Contig_9442 12 . A G 2471.09 . AB=0.201521;ABP=410.042;AC=5;AF=0.416667;AN=12;AO=114;CIGAR=1X6M1X;DP=667;DPB=667;DPRA=0;EPP=250.558;EPPR=938.915;GTI=0;LEN=1;MEANALT=4.33333;MQM=46.4211;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.464912;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3705;QR=16981;RO=431;RPL=0;RPP=250.558;RPPR=938.915;RPR=114;RUN=1;SAF=114;SAP=250.558;SAR=0;SRF=431;SRP=938.915;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:59:44,3,8,2:44:1731:3,8,2:111,203,82:-0.980193,-8.10396,-149.714,0,-136.401,-140.103,-7.4316,-143.847,-135.741,-149.357 0|1:131:54,26,44,4:54:2076:26,44,4:1009,1531,163:-106.091,-40.6001,-203.207,0,-88.6842,-157.173,-108.897,-197.584,-156.97,-278.117 0|1:57:18,25,10,3:18:716:25,10,3:955,340,112:-67.5669,0,-51.4554,-45.6617,-31.669,-101.619,-63.8172,-49.8147,-95.4624,-121.882 0|1:130:60,39,24,4:60:2384:39,24,4:1438,806,163:-75.9192,0,-184.57,-30.7044,-133.056,-219.799,-80.5283,-182.862,-213.574,-275.636 0|0:141:130,1,8,0:130:5149:1,8,0:30,255,0:0,-36.9304,-460.486,-19.11,-440.738,-440.537,-39.1339,-460.787,-442.945,-462.994 0|1:149:125,1,20,0:125:4925:1,20,0:40,570,0:-4.74621,-39.3435,-444.305,0,-402.139,-399.146,-42.375,-444.606,-405.167,-447.634 dDocent_Contig_9443 10 . C A 966.136 . AB=0.211982;ABP=159.366;AC=2;AF=0.166667;AN=12;AO=53;CIGAR=1X;DP=435;DPB=435;DPRA=1.41111;EPP=118.098;EPPR=830.341;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.811321;PAIREDR=0.908136;PAO=0;PQA=0;PQR=0;PRO=0;QA=2101;QR=15272;RO=381;RPL=0;RPP=118.098;RPPR=830.341;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=381;SRP=830.341;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:38,2:38:1526:2:82:0,-4.26152,-129.788 0/0:76:73,3:73:2932:3:110:0,-12.621,-253.706 0/0:48:46,2:46:1832:2:82:0,-6.66976,-157.3 0/0:54:54,0:54:2165:0:0:0,-16.2556,-195.024 0/1:91:66,24:66:2646:24:955:-58.9769,0,-210.988 0/1:126:104,22:104:4171:22:872:-40.8586,0,-337.418 dDocent_Contig_9444 36 . C T 2665.4 . AB=0.244306;ABP=277.295;AC=4;AF=0.333333;AN=12;AO=130;CIGAR=1X;DP=735;DPB=735;DPRA=0;EPP=285.302;EPPR=1316.75;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995041;PAO=0;PQA=0;PQR=0;PRO=0;QA=5128;QR=24175;RO=605;RPL=0;RPP=285.302;RPPR=1316.75;RPR=130;RUN=1;SAF=130;SAP=285.302;SAR=0;SRF=605;SRP=1316.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:51:40,11:40:1585:11:420:-22.7937,0,-127.533 0/1:142:100,42:100:4005:42:1648:-105.809,0,-317.685 0/1:156:111,45:111:4424:45:1788:-114.172,0,-351.136 0/1:134:114,20:114:4576:20:789:-30.9862,0,-371.421 0/0:114:105,9:105:4213:9:361:0,-1.46391,-346.265 0/0:138:135,3:135:5372:3:122:0,-30.1696,-471.947 dDocent_Contig_9445 21 . A C 973.956 . AB=0.244681;ABP=56.2345;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=3M1X9M;DP=143;DPB=146.462;DPRA=1.36232;EPP=52.9542;EPPR=163.699;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=921;QR=2861;RO=74;RPL=0;RPP=52.9542;RPPR=163.699;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=74;SRP=163.699;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:23:21,0,0,0,0:21:799:0,0,0,0:0,0,0,0:0,-6.32163,-71.8226,-6.32163,-71.8226,-71.8226,-6.32163,-71.8226,-71.8226,-71.8226,-6.32163,-71.8226,-71.8226,-71.8226,-71.8226 0|1:17:12,2,1,0,2:12:460:2,1,0,2:77,38,0,77:-2.71071,-0.000925065,-37.1485,-3.20754,-34.6343,-40.6549,-6.32307,-37.7505,-40.9559,-44.0722,0,-31.4279,-34.6334,-37.7496,-37.1476 0|1:47:10,11,3,4,17:10:390:11,3,4,17:445,122,154,681:-57.7412,-24.0557,-52.8028,-50.6869,-46.0491,-81.8411,-48.1115,-43.4736,-70.104,-78.9642,-4.64167,0,-26.6355,-24.0604,-31.5835 0|0:30:15,3,0,8,4:15:592:3,0,8,4:118,0,320,163:-21.8439,-16.6545,-64.4589,-26.3593,-65.362,-75.0682,0,-39.0011,-48.7072,-46.299,-12.9095,-51.913,-61.6193,-35.2576,-60.4152 0|0:8:4,4,0,0,0:4:158:4,0,0,0:150,0,0,0:-11.4551,0,-12.1922,-12.6592,-13.3964,-25.6709,-12.6592,-13.3964,-25.6709,-25.6709,-12.6592,-13.3964,-25.6709,-25.6709,-25.6709 0|0:18:12,5,0,0,0:12:462:5,0,0,0:199,0,0,0:-12.7878,0,-36.4276,-16.4002,-37.9327,-54.3218,-16.4002,-37.9327,-54.3218,-54.3218,-16.4002,-37.9327,-54.3218,-54.3218,-54.3218 dDocent_Contig_9446 54 . T C 388.727 . AB=0.212766;ABP=70.3721;AC=3;AF=0.25;AN=12;AO=20;CIGAR=1X;DP=159;DPB=159;DPRA=1.44615;EPP=46.4397;EPPR=304.845;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=791;QR=5540;RO=139;RPL=20;RPP=46.4397;RPPR=304.845;RPR=0;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=139;SRP=304.845;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:684:0:0:0,-5.41854,-61.881 0/1:7:6,1:6:243:1:41:-1.98736,0,-20.141 0/1:42:28,14:28:1124:14:551:-37.2875,0,-88.8017 0/1:45:40,5:40:1604:5:199:-4.74171,0,-131.045 0/0:9:9,0:9:351:0:0:0,-2.70927,-31.945 0/0:38:38,0:38:1534:0:0:0,-11.4391,-138.3 dDocent_Contig_9447 18 . T G 8511.49 . AB=0.22695;ABP=1098.73;AC=6;AF=0.5;AN=12;AO=384;CIGAR=1X;DP=1692;DPB=1692;DPRA=0;EPP=836.856;EPPR=2843.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.976562;PAIREDR=0.999235;PAO=0;PQA=0;PQR=0;PRO=0;QA=15232;QR=52101;RO=1308;RPL=0;RPP=836.856;RPPR=2843.3;RPR=384;RUN=1;SAF=384;SAP=836.856;SAR=0;SRF=1308;SRP=2843.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:335:263,72:263:10478:72:2872:-157.739,0,-841.484 0/1:351:262,89:262:10494:89:3526:-211.722,0,-838.086 0/1:187:106,81:106:4232:81:3208:-232.497,0,-324.532 0/1:344:265,79:265:10492:79:3147:-179.757,0,-840.054 0/1:238:211,27:211:8381:27:1047:-22.8674,0,-682.183 0/1:237:201,36:201:8024:36:1432:-57.7884,0,-650.371 dDocent_Contig_9448 15 . A T 1624.96 . AB=0.217158;ABP=262.196;AC=5;AF=0.416667;AN=12;AO=85;CIGAR=1X;DP=436;DPB=436;DPRA=0;EPP=187.585;EPPR=765.197;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.870588;PAIREDR=0.846154;PAO=0;PQA=0;PQR=0;PRO=0;QA=3289;QR=13892;RO=351;RPL=0;RPP=187.585;RPPR=765.197;RPR=85;RUN=1;SAF=85;SAP=187.585;SAR=0;SRF=351;SRP=765.197;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:47,7:47:1859:7:268:-8.22614,0,-151.263 0/1:75:49,26:49:1965:26:1021:-69.6139,0,-154.468 0/0:63:59,4:59:2341:4:152:0,-4.91567,-196.804 0/1:76:66,10:66:2576:10:390:-12.5784,0,-209.111 0/1:71:56,15:56:2254:15:576:-30.8053,0,-181.649 0/1:97:74,23:74:2897:23:882:-50.4936,0,-231.645 dDocent_Contig_9449 106 . N T 837.313 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=51;CIGAR=2X;DP=52;DPB=52;DPRA=0;EPP=113.755;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=22.2941;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1527;QR=0;RO=0;RPL=0;RPP=113.755;RPPR=0;RPR=51;RUN=1;SAF=0;SAP=113.755;SAR=51;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:11:0,11:0:0:11:318:-15.4209,-3.31133,0 1|1:9:0,9:0:0:9:286:-17.0568,-2.70927,0 1|1:15:0,15:0:0:15:417:-30.4121,-4.51545,0 1|1:9:0,8:0:0:8:263:-11.968,-2.40824,0 1|1:5:0,5:0:0:5:160:-4.67502,-1.50515,0 1|1:3:0,3:0:0:3:83:-3.42026,-0.90309,0 dDocent_Contig_9450 1 . N G 634.569 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=20;CIGAR=1X;DP=20;DPB=20;DPRA=0;EPP=46.4397;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=55.95;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=689;QR=0;RO=0;RPL=0;RPP=46.4397;RPPR=0;RPR=20;RUN=1;SAF=0;SAP=46.4397;SAR=20;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:6:0,6:0:0:6:210:-19.2311,-1.80618,0 1/1:13:0,13:0:0:13:444:-40.2513,-3.91339,0 1/1:1:0,1:0:0:1:35:-3.49656,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_9451 14 . C A 174.91 . AB=0.15;ABP=88.132;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=390;DPB=390;DPRA=1.29032;EPP=29.068;EPPR=823.827;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.973545;PAO=0;PQA=0;PQR=0;PRO=0;QA=475;QR=15258;RO=378;RPL=0;RPP=29.068;RPPR=823.827;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=378;SRP=823.827;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:31,0:31:1264:0:0:0,-9.33193,-114.022 0/0:69:69,0:69:2770:0:0:0,-20.7711,-249.4 0/0:48:48,0:48:1929:0:0:0,-14.4494,-173.801 0/0:82:82,0:82:3307:0:0:0,-24.6845,-297.677 0/0:80:80,0:80:3222:0:0:0,-24.0824,-290.025 0/1:80:68,12:68:2766:12:475:-19.0139,0,-224.95 dDocent_Contig_9452 19 . A T 339.442 . AB=0.1875;ABP=84.4405;AC=2;AF=0.166667;AN=12;AO=18;CIGAR=1X;DP=261;DPB=261;DPRA=1.16364;EPP=42.0968;EPPR=530.678;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8807;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.744856;PAO=0;PQA=0;PQR=0;PRO=0;QA=726;QR=9637;RO=243;RPL=0;RPP=42.0968;RPPR=530.678;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=243;SRP=530.678;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:36,0:36:1423:0:0:0,-10.8371,-127.392 0/0:47:47,0:47:1883:0:0:0,-14.1484,-169.674 0/0:18:18,0:18:715:0:0:0,-5.41854,-64.6732 0/0:64:64,0:64:2494:0:0:0,-19.2659,-224.616 0/1:30:21,9:21:836:9:368:-24.4545,0,-66.523 0/1:66:57,9:57:2286:9:358:-12.7116,0,-186.03 dDocent_Contig_9453 21 . C A 36.1145 . AB=0.113636;ABP=60.0608;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=2277;DPB=2277;DPRA=1.08125;EPP=26.8965;EPPR=4914.88;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=59.9973;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0909091;PAIREDR=0.912467;PAO=0;PQA=0;PQR=0;PRO=0;QA=438;QR=89618;RO=2262;RPL=0;RPP=26.8965;RPPR=4914.88;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=2262;SRP=4914.88;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:433:429,4:429:17081:4:157:0,-115.837,-1521.45 0/0:598:596,0:596:23614:0:0:0,-179.414,-2122.91 0/0:315:313,1:313:12406:1:40:0,-90.9322,-1111.67 0/0:765:763,1:763:30180:1:41:0,-226.297,-2709.48 0/1:44:39,5:39:1513:5:200:-5.13422,0,-123.172 0/0:122:122,0:122:4824:0:0:0,-36.7257,-434.082 dDocent_Contig_9454 9 . G C 7275.53 . AB=0.718101;ABP=142.249;AC=6;AF=0.5;AN=12;AO=242;CIGAR=1X;DP=337;DPB=337;DPRA=0;EPP=528.507;EPPR=209.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.933884;PAIREDR=0.831579;PAO=0;PQA=0;PQR=0;PRO=0;QA=9318;QR=3630;RO=95;RPL=0;RPP=528.507;RPPR=209.3;RPR=242;RUN=1;SAF=242;SAP=528.507;SAR=0;SRF=95;SRP=209.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:51:20,31:20:752:31:1173:-90.5074,0,-52.6522 0/1:64:12,52:12:460:52:2021:-162.856,0,-22.4843 0/1:50:19,31:19:729:31:1202:-93.4241,0,-50.8886 0/1:71:26,45:26:1002:45:1742:-135.661,0,-69.1174 0/1:62:11,51:11:416:51:1956:-157.616,0,-19.1267 0/1:39:7,32:7:271:32:1224:-98.7097,0,-13.0163 dDocent_Contig_9456 24 . G T 94.589 . AB=0.101695;ABP=84.3117;AC=0;AF=0;AN=12;AO=23;CIGAR=2X3M1X2M1X;DP=405;DPB=405;DPRA=0.69011;EPP=52.9542;EPPR=782.569;GTI=0;LEN=1;MEANALT=2.2;MQM=7.91304;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=882;QR=13906;RO=359;RPL=0;RPP=52.9542;RPPR=782.569;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=359;SRP=782.569;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:82:75,0,0,7,0:75:2913:0,0,7,0:0,0,266,0:0,-22.5772,-262.211,-22.5772,-262.211,-262.211,-19.7499,-259.487,-259.487,-257.38,-22.5772,-262.211,-262.211,-259.487,-262.211 0|0:124:117,0,0,3,4:117:4524:0,0,3,4:0,0,114,152:0,-35.2205,-406.918,-35.2205,-406.918,-406.918,-34.0932,-405.67,-405.67,-404.767,-22.5844,-394.454,-394.454,-393.205,-393.249 0|0:49:38,3,0,7,0:38:1453:3,0,7,0:119,0,270,0:0,-8.5493,-127.108,-11.4391,-128.011,-130.873,-8.53876,-125.125,-127.982,-125.875,-11.4391,-128.011,-130.873,-127.982,-130.873 0|0:91:88,0,0,0,0:88:3428:0,0,0,0:0,0,0,0:0,-26.4906,-308.225,-26.4906,-308.225,-308.225,-26.4906,-308.225,-308.225,-308.225,-26.4906,-308.225,-308.225,-308.225,-308.225 0|0:40:27,0,3,4,6:27:1061:0,3,4,6:0,112,155,188:-7.09216,-15.22,-102.631,-14.8128,-102.207,-101.304,-13.5901,-100.983,-100.564,-99.7792,0,-87.5264,-87.1066,-85.8845,-85.7202 0|0:19:14,0,0,2,3:14:527:0,0,2,3:0,0,77,117:-5.58856,-9.80298,-53.0579,-9.80298,-53.0579,-53.0579,-9.08953,-52.252,-52.252,-51.6499,0,-43.4327,-43.4327,-42.6324,-42.5296 dDocent_Contig_9457 13 . G A 215.281 . AB=0.128378;ABP=180.543;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=430;DPB=430;DPRA=1.07729;EPP=46.4397;EPPR=893.314;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.990244;PAO=0;PQA=0;PQR=0;PRO=0;QA=799;QR=16317;RO=410;RPL=0;RPP=46.4397;RPPR=893.314;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=410;SRP=893.314;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:61:61,0:61:2409:0:0:0,-18.3628,-216.957 0/0:75:74,1:74:2926:1:37:0,-18.8794,-259.752 0/0:93:93,0:93:3720:0:0:0,-27.9958,-334.812 0/1:84:76,8:76:3053:8:314:-3.33658,0,-249.56 0/0:53:53,0:53:2094:0:0:0,-15.9546,-188.642 0/1:64:53,11:53:2115:11:448:-21.4101,0,-171.261 dDocent_Contig_9458 110 . A T 76.1712 . AB=0.16;ABP=53.2147;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=172;DPB=172;DPRA=0.932584;EPP=24.725;EPPR=354.789;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.9;PAIREDR=0.790123;PAO=0;PQA=0;PQR=0;PRO=0;QA=350;QR=5573;RO=162;RPL=0;RPP=24.725;RPPR=354.789;RPR=10;RUN=1;SAF=0;SAP=24.725;SAR=10;SRF=0;SRP=354.789;SRR=162;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:16,3:16:554:3:105:-4.07659,0,-44.4682 0/1:31:26,5:26:877:5:175:-6.76176,0,-69.9057 0/0:38:38,0:38:1287:0:0:0,-11.4391,-116.126 0/0:33:31,2:31:1080:2:70:0,-3.28659,-90.8639 0/0:28:28,0:28:974:0:0:0,-8.42884,-87.9747 0/0:23:23,0:23:801:0:0:0,-6.92369,-72.4108 dDocent_Contig_9459 98 . N A 231.889 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=10;CIGAR=1X;DP=10;DPB=10;DPRA=0;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=233;QR=0;RO=0;RPL=10;RPP=24.725;RPPR=0;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:19:-1.89997,-0.30103,0 1/1:4:0,4:0:0:4:101:-9.3413,-1.20412,0 1/1:2:0,2:0:0:2:41:-3.89396,-0.60206,0 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:1:0,1:0:0:1:9:-0.899997,-0.30103,0 dDocent_Contig_9460 17 . A C 123.86 . AB=0.020979;ABP=288.02;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=3M1X2M13I1X2M1X1M1X6M;DP=496;DPB=565.278;DPRA=0.905063;EPP=9.52472;EPPR=194.1;GTI=0;LEN=1;MEANALT=15;MQM=43;MQMR=59.5568;NS=6;NUMALT=8;ODDS=0;PAIRED=1;PAIREDR=0.988636;PAO=0;PQA=0;PQR=0;PRO=0;QA=119;QR=3394;RO=88;RPL=0;RPP=9.52472;RPPR=185.513;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=87;SRP=185.513;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:78:8,0,0,0,0,2,3,0,0:8:303:0,0,0,0,2,3,0,0:0,0,0,0,72,104,0,0:-5.60839,-8.01663,-32.854,-8.01663,-32.854,-32.854,-8.01663,-32.854,-32.854,-32.854,-8.01663,-32.854,-32.854,-32.854,-32.854,-2.43889,-27.2763,-27.2763,-27.2763,-27.2763,-26.6742,0,-24.8373,-24.8373,-24.8373,-24.8373,-19.2596,-23.9342,-8.01663,-32.854,-32.854,-32.854,-32.854,-27.2763,-24.8373,-32.854,-8.01663,-32.854,-32.854,-32.854,-32.854,-27.2763,-24.8373,-32.854,-32.854 0|0:136:25,2,2,2,0,0,0,0,0:25:983:2,2,2,0,0,0,0,0:71,79,74,0,0,0,0,0:0,-2.00048,-82.263,-1.23601,-76.5755,-81.4987,-1.78554,-77.1249,-76.3606,-82.0481,-7.52575,-82.8651,-82.1007,-82.6502,-88.3903,-7.52575,-82.8651,-82.1007,-82.6502,-88.3903,-88.3903,-7.52575,-82.8651,-82.1007,-82.6502,-88.3903,-88.3903,-88.3903,-7.52575,-82.8651,-82.1007,-82.6502,-88.3903,-88.3903,-88.3903,-88.3903,-7.52575,-82.8651,-82.1007,-82.6502,-88.3903,-88.3903,-88.3903,-88.3903,-88.3903 0|0:22:6,0,0,0,0,0,0,0,0:6:238:0,0,0,0,0,0,0,0:0,0,0,0,0,0,0,0:0,-1.80618,-21.4036,-1.80618,-21.4036,-21.4036,-1.80618,-21.4036,-21.4036,-21.4036,-1.80618,-21.4036,-21.4036,-21.4036,-21.4036,-1.80618,-21.4036,-21.4036,-21.4036,-21.4036,-21.4036,-1.80618,-21.4036,-21.4036,-21.4036,-21.4036,-21.4036,-21.4036,-1.80618,-21.4036,-21.4036,-21.4036,-21.4036,-21.4036,-21.4036,-21.4036,-1.80618,-21.4036,-21.4036,-21.4036,-21.4036,-21.4036,-21.4036,-21.4036,-21.4036 0|1:89:16,0,0,0,0,0,0,2,0:16:611:0,0,0,0,0,0,2,0:0,0,0,0,0,0,79,0:-1.40191,-6.21839,-54.8977,-6.21839,-54.8977,-54.8977,-6.21839,-54.8977,-54.8977,-54.8977,-6.21839,-54.8977,-54.8977,-54.8977,-54.8977,-6.21839,-54.8977,-54.8977,-54.8977,-54.8977,-54.8977,-6.21839,-54.8977,-54.8977,-54.8977,-54.8977,-54.8977,-54.8977,0,-48.6793,-48.6793,-48.6793,-48.6793,-48.6793,-48.6793,-48.0773,-6.21839,-54.8977,-54.8977,-54.8977,-54.8977,-54.8977,-54.8977,-48.6793,-54.8977 0|0:54:5,0,0,0,4,0,0,1,0:5:199:0,0,0,4,0,0,1,0:0,0,0,144,0,0,40,0:-9.97125,-11.4764,-27.8657,-11.4764,-27.8657,-27.8657,-11.4764,-27.8657,-27.8657,-27.8657,0,-16.3894,-16.3894,-16.3894,-15.1853,-11.4764,-27.8657,-27.8657,-27.8657,-16.3894,-27.8657,-11.4764,-27.8657,-27.8657,-27.8657,-16.3894,-27.8657,-27.8657,-8.33584,-24.7252,-24.7252,-24.7252,-13.2489,-24.7252,-24.7252,-24.4242,-11.4764,-27.8657,-27.8657,-27.8657,-16.3894,-27.8657,-27.8657,-24.7252,-27.8657 0|0:117:28,0,0,0,0,0,0,0,4:28:1060:0,0,0,0,0,0,0,4:0,0,0,0,0,0,0,132:-1.16066,-9.5895,-96.4823,-9.5895,-96.4823,-96.4823,-9.5895,-96.4823,-96.4823,-96.4823,-9.5895,-96.4823,-96.4823,-96.4823,-96.4823,-9.5895,-96.4823,-96.4823,-96.4823,-96.4823,-96.4823,-9.5895,-96.4823,-96.4823,-96.4823,-96.4823,-96.4823,-96.4823,-9.5895,-96.4823,-96.4823,-96.4823,-96.4823,-96.4823,-96.4823,-96.4823,0,-86.8922,-86.8922,-86.8922,-86.8922,-86.8922,-86.8922,-86.8922,-85.6881 dDocent_Contig_9461 37 . C G 4953.6 . AB=0.223849;ABP=319.627;AC=3;AF=0.25;AN=12;AO=107;CIGAR=1M1D1M2X;DP=478;DPB=456.6;DPRA=0;EPP=235.358;EPPR=469.877;GTI=0;LEN=1;MEANALT=3.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4044;QR=7884;RO=215;RPL=0;RPP=235.358;RPPR=469.877;RPR=107;RUN=1;SAF=107;SAP=235.358;SAR=0;SRF=215;SRP=469.877;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:53:21,20,12:21:782:20,12:742,478:-54.3724,0,-57.9744,-21.3224,-24.6242,-81.7221 0|0:40:19,5,15:19:670:5,15:188,585:-42.3769,-32.6994,-85.7223,0,-39.1261,-50.0153 0|1:65:26,32,6:26:954:32,6:1199,244:-90.3803,0,-68.3539,-78.0744,-57.8514,-154.251 0|0:127:88,15,22:88:3246:15,22:567,837:-42.174,-22.1856,-283.143,0,-219.009,-258.86 0|0:107:35,10,60:35:1274:10,60:383,2287:-177.057,-156.16,-257.197,0,-72.6149,-85.9897 1|0:86:26,25,34:26:958:25,34:965,1305:-100.213,-28.7874,-99.5975,-0.925493,0,-69.0263 dDocent_Contig_9462 12 . C T 63.0636 . AB=0.5;ABP=3.0103;AC=3;AF=0.25;AN=12;AO=3;CIGAR=1M1I3M1X;DP=16;DPB=22.4;DPRA=3;EPP=9.52472;EPPR=3.0103;GTI=0;LEN=1;MEANALT=3;MQM=36;MQMR=59;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.625;PAO=0;PQA=0;PQR=0;PRO=13;QA=103;QR=285;RO=8;RPL=0;RPP=9.52472;RPPR=20.3821;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=4;SRP=3.0103;SRR=4;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:3:3,0:3:119:0:0:0,-0.90309,-11.0945 0|1:6:1,3:1:33:3:103:-7.51206,0,-1.7877 1|1:1:0,0:0:0:0:0:0,0,0 0|0:3:2,0:2:68:0:0:0,-0.60206,-6.19305 0|0:2:1,0:1:32:0:0:0,-0.30103,-2.87859 0|0:1:1,0:1:33:0:0:0,-0.30103,-3.29913 dDocent_Contig_9464 107 . N T 175.849 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=55.4;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0.4;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=173;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49828,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.43613,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.39863,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:69:-6.5513,-0.60206,0 dDocent_Contig_9468 107 . N C 253.806 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=8;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=59.25;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0.25;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=261;QR=0;RO=0;RPL=0;RPP=20.3821;RPPR=0;RPR=8;RUN=1;SAF=2;SAP=7.35324;SAR=6;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:66:-6.26664,-0.60206,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 1/1:2:0,2:0:0:2:43:-4.0837,-0.60206,0 dDocent_Contig_9469 20 . C T 57.2745 . AB=0.235294;ABP=13.3567;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=303;DPB=303;DPRA=3.59459;EPP=14.8328;EPPR=435.562;GTI=0;LEN=1;MEANALT=1;MQM=57.2222;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.111111;PAIREDR=0.911565;PAO=0;PQA=0;PQR=0;PRO=0;QA=297;QR=11498;RO=294;RPL=0;RPP=22.5536;RPPR=641.423;RPR=9;RUN=1;SAF=1;SAP=14.8328;SAR=8;SRF=268;SRP=435.562;SRR=26;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:39,2:39:1535:2:70:0,-5.70255,-131.757 0/0:138:136,2:136:5285:2:62:0,-35.6536,-469.663 0/1:17:13,4:13:524:4:134:-7.25024,0,-42.3896 0/0:70:69,1:69:2699:1:31:0,-17.9726,-239.943 0/0:3:3,0:3:99:0:0:0,-0.90309,-9.2374 0/0:34:34,0:34:1356:0:0:0,-10.235,-122.3 dDocent_Contig_9470 11 . T C 139.947 . AB=0;ABP=0;AC=2;AF=0.333333;AN=6;AO=4;CIGAR=1X;DP=6;DPB=6;DPRA=4;EPP=11.6962;EPPR=7.35324;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=40;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=163;QR=80;RO=2;RPL=0;RPP=11.6962;RPPR=7.35324;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=2;SRP=7.35324;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:1:1,0:1:39:0:0:0,-0.30103,-3.64612 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 0/0:1:1,0:1:41:0:0:0,-0.30103,-3.74612 1/1:4:0,4:0:0:4:163:-13.817,-1.20412,0 ./.:.:.:.:.:.:.:. dDocent_Contig_9471 9 . G A 2530.9 . AB=0.474227;ABP=4.12962;AC=4;AF=0.333333;AN=12;AO=92;CIGAR=1X;DP=327;DPB=327;DPRA=0.729323;EPP=202.786;EPPR=513.306;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3527;QR=8991;RO=235;RPL=0;RPP=202.786;RPPR=513.306;RPR=92;RUN=1;SAF=92;SAP=202.786;SAR=0;SRF=235;SRP=513.306;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:18,23:18:695:23:889:-67.9871,0,-50.5422 0/1:51:36,15:36:1401:15:578:-37.0104,0,-111.017 0/1:31:24,7:24:898:7:272:-15.5153,0,-71.8011 0/1:71:24,47:24:923:47:1788:-139.799,0,-62.013 0/0:85:85,0:85:3230:0:0:0,-25.5875,-290.85 0/0:48:48,0:48:1844:0:0:0,-14.4494,-166.209 dDocent_Contig_9472 7 . A T 59.32 . AB=0.133333;ABP=73.0765;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=281;DPB=281;DPRA=2.80342;EPP=29.068;EPPR=584.965;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=432;QR=10210;RO=268;RPL=0;RPP=29.068;RPPR=584.965;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=268;SRP=584.965;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:31,0:31:1188:0:0:0,-9.33193,-107.219 0/1:60:51,8:51:1938:8:278:-7.45487,0,-156.789 0/0:21:21,0:21:779:0:0:0,-6.32163,-70.431 0/0:104:100,4:100:3826:4:154:0,-17.0737,-330.214 0/0:21:21,0:21:792:0:0:0,-6.32163,-71.6036 0/0:44:44,0:44:1687:0:0:0,-13.2453,-152.091 dDocent_Contig_9473 14 . A G 112.011 . AB=0.25;ABP=13.8677;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=165;DPB=165;DPRA=0.833333;EPP=22.5536;EPPR=341.76;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9551;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0;PAIREDR=0.711538;PAO=0;PQA=0;PQR=0;PRO=0;QA=366;QR=6247;RO=156;RPL=0;RPP=22.5536;RPPR=341.76;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=156;SRP=341.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:16,1:16:638:1:41:0,-1.02294,-53.66 0/1:20:15,5:15:608:5:204:-12.7234,0,-49.0371 0/0:14:14,0:14:552:0:0:0,-4.21442,-50.0236 0/0:38:35,3:35:1384:3:121:0,-0.159154,-113.531 0/0:42:42,0:42:1691:0:0:0,-12.6433,-152.415 0/0:34:34,0:34:1374:0:0:0,-10.235,-123.896 dDocent_Contig_9474 17 . C T 200.735 . AB=0.1133;ABP=266.678;AC=2;AF=0.166667;AN=12;AO=28;CIGAR=1X;DP=662;DPB=662;DPRA=0.742105;EPP=63.8115;EPPR=1379.72;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996845;PAO=0;PQA=0;PQR=0;PRO=0;QA=1127;QR=25207;RO=634;RPL=0;RPP=63.8115;RPPR=1379.72;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=634;SRP=1379.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:113:100,13:100:3974:13:524:-13.4885,0,-323.631 0/0:174:174,0:174:6942:0:0:0,-52.3792,-624.461 0/1:90:80,10:80:3164:10:406:-9.80683,0,-257.734 0/0:191:191,0:191:7601:0:0:0,-57.4967,-683.685 0/0:15:15,0:15:591:0:0:0,-4.51545,-53.5276 0/0:79:74,5:74:2935:5:197:0,-5.67646,-246.146 dDocent_Contig_9475 9 . G A 814.802 . AB=0.177305;ABP=258.074;AC=4;AF=0.333333;AN=12;AO=51;CIGAR=1X;DP=392;DPB=392;DPRA=1.91892;EPP=113.755;EPPR=739.139;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.980392;PAIREDR=0.843658;PAO=0;PQA=0;PQR=0;PRO=0;QA=1950;QR=12968;RO=339;RPL=0;RPP=113.755;RPPR=739.139;RPR=51;RUN=1;SAF=51;SAP=113.755;SAR=0;SRF=339;SRP=739.139;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:49:35,14:35:1341:14:523:-32.6562,0,-106.227 0/1:107:95,12:95:3649:12:463:-9.81124,0,-296.319 0/1:50:35,15:35:1321:15:580:-37.491,0,-104.125 0/1:76:65,9:65:2485:9:345:-8.74366,0,-201.183 0/0:37:37,0:37:1393:0:0:0,-11.1381,-125.644 0/0:73:72,1:72:2779:1:39:0,-18.0786,-246.391 dDocent_Contig_9476 28 . T C 70.6469 . AB=0.109091;ABP=149.012;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=323;DPB=323;DPRA=1.03286;EPP=29.068;EPPR=678.338;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0.935691;PAO=0;PQA=0;PQR=0;PRO=0;QA=468;QR=12453;RO=311;RPL=0;RPP=29.068;RPPR=678.338;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=311;SRP=678.338;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:38,0:38:1528:0:0:0,-11.4391,-137.757 0/1:66:58,8:58:2311:8:312:-8.57694,0,-188.277 0/0:50:50,0:50:1989:0:0:0,-15.0515,-179.206 0/0:55:55,0:55:2199:0:0:0,-16.5566,-198.082 0/1:44:40,4:40:1591:4:156:-1.17197,0,-130.183 0/0:70:70,0:70:2835:0:0:0,-21.0721,-255.242 dDocent_Contig_9477 28 . G A 45.9301 . AB=0.131579;ABP=47.8112;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=331;DPB=331;DPRA=0.648464;EPP=13.8677;EPPR=710.91;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=191;QR=12934;RO=326;RPL=0;RPP=13.8677;RPPR=710.91;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=326;SRP=710.91;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:51:51,0:51:2015:0:0:0,-15.3525,-181.538 0/0:88:88,0:88:3518:0:0:0,-26.4906,-316.646 0/1:38:33,5:33:1306:5:191:-6.11587,0,-106.369 0/0:77:77,0:77:3055:0:0:0,-23.1793,-275.021 0/0:47:47,0:47:1840:0:0:0,-14.1484,-165.805 0/0:30:30,0:30:1200:0:0:0,-9.0309,-108.276 dDocent_Contig_9478 101 . N A 296.48 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=8;CIGAR=5X5I2X;DP=8;DPB=13.7143;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0.625;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=306;QR=0;RO=0;RPL=0;RPP=20.3821;RPPR=0;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:1:0,1:0:0:1:38:-3.79727,-0.30103,0 1|1:3:0,3:0:0:3:116:-10.8177,-0.90309,0 1|1:3:0,3:0:0:3:114:-10.6324,-0.90309,0 .:.:.:.:.:.:.:. 1|1:1:0,1:0:0:1:38:-3.79727,-0.30103,0 .:.:.:.:.:.:.:. dDocent_Contig_9479 77 . T G 22441.4 . AB=0.66055;ABP=173.839;AC=8;AF=0.666667;AN=12;AO=849;CIGAR=1X;DP=1136;DPB=1136;DPRA=0;EPP=1846.59;EPPR=626.223;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.822144;PAIREDR=0.986063;PAO=0;PQA=0;PQR=0;PRO=0;QA=28524;QR=9866;RO=287;RPL=849;RPP=1846.59;RPPR=626.223;RPR=0;RUN=1;SAF=849;SAP=1846.59;SAR=0;SRF=287;SRP=626.223;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:239:72,167:72:2471:167:5606:-432.759,0,-150.709 0/1:252:93,159:93:3145:159:5349:-405.722,0,-207.427 0/1:176:55,121:55:1935:121:4014:-308.488,0,-121.444 1/1:317:28,289:28:966:289:9726:-788.126,-8.17323,0 0/1:96:39,57:39:1349:57:1931:-145.167,0,-92.8116 1/1:56:0,56:0:0:56:1898:-171.099,-16.8577,0 dDocent_Contig_9480 79 . T C 60.505 . AB=0.0416667;ABP=90.593;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X3M;DP=228;DPB=228;DPRA=0;EPP=22.5536;EPPR=401.459;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.965517;PAO=0;PQA=0;PQR=0;PRO=0;QA=310;QR=7067;RO=203;RPL=9;RPP=22.5536;RPPR=443.819;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=198;SRP=401.459;SRR=5;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:29:25,0,2:25:836:0,2:0,69:0,-7.52575,-75.2008,-1.92501,-69.5944,-68.9924 0|0:38:36,0,2:36:1250:0,2:0,70:0,-10.8371,-112.454,-4.79174,-106.759,-106.157 0|0:38:34,2,1:34:1191:2,1:69,35:0,-4.63428,-100.94,-7.38728,-98.6946,-103.999 0|0:37:35,0,2:35:1223:0,2:0,67:0,-10.536,-110.039,-4.77497,-104.614,-104.012 0|1:38:32,6,0:32:1125:6,0:207,0:-7.5291,0,-90.1152,-17.1621,-91.9214,-108.738 0|1:48:41,5,2:41:1442:5,2:174,69:-1.80884,0,-115.881,-8.5462,-111.781,-125.327 dDocent_Contig_9481 7 . A C 6710.82 . AB=0.164887;ABP=2469.87;AC=4;AF=0.333333;AN=12;AO=488;CIGAR=1X;DP=3976;DPB=3976;DPRA=0;EPP=1062.69;EPPR=7455.5;GTI=0;LEN=1;MEANALT=2.33333;MQM=58.4754;MQMR=59.9674;NS=6;NUMALT=1;ODDS=0;PAIRED=0.409836;PAIREDR=0.355769;PAO=0;PQA=0;PQR=0;PRO=0;QA=18658;QR=130184;RO=3432;RPL=0;RPP=1062.69;RPPR=7455.5;RPR=488;RUN=1;SAF=488;SAP=1062.69;SAR=0;SRF=3432;SRP=7455.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:503:394,103:394:14924:103:3936:-204.23,0,-1192.55 0/1:739:604,120:604:22902:120:4578:-191.344,0,-1841.68 0/1:536:445,88:445:16918:88:3391:-144.455,0,-1360.9 0/1:751:631,106:631:23937:106:4014:-138.275,0,-1930.88 0/0:625:581,37:581:22053:37:1424:0,-57.9222,-1855.14 0/0:822:777,34:777:29450:34:1315:0,-128.196,-2532.55 dDocent_Contig_9482 79 . C T 429.776 . AB=0.240385;ABP=63.895;AC=2;AF=0.166667;AN=12;AO=27;CIGAR=1X;DP=500;DPB=500;DPRA=0.992032;EPP=61.6401;EPPR=1027.95;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.740741;PAIREDR=0.506356;PAO=0;PQA=0;PQR=0;PRO=0;QA=927;QR=17454;RO=472;RPL=12;RPP=3.73412;RPPR=120.785;RPR=15;RUN=1;SAF=12;SAP=3.73412;SAR=15;SRF=316;SRP=120.785;SRR=156;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:61:61,0:61:2172:0:0:0,-18.3628,-195.719 0/1:68:56,12:56:2114:12:410:-16.7558,0,-170.032 0/1:36:23,13:23:847:13:444:-29.4437,0,-65.7062 0/0:77:77,0:77:2884:0:0:0,-23.1793,-259.761 0/0:113:113,0:113:4186:0:0:0,-34.0164,-376.868 0/0:145:142,2:142:5251:2:73:0,-36.7851,-465.722 dDocent_Contig_9484 1 . N G 208.832 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=8.76405;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=228;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:6:0,6:0:0:6:228:-20.8831,-1.80618,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_9485 48 . G A 12513 . AB=0.671642;ABP=157.314;AC=6;AF=0.5;AN=12;AO=405;CIGAR=1X;DP=603;DPB=603;DPRA=0;EPP=882.457;EPPR=432.962;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.893827;PAIREDR=0.914141;PAO=0;PQA=0;PQR=0;PRO=0;QA=16037;QR=7920;RO=198;RPL=0;RPP=882.457;RPPR=432.962;RPR=405;RUN=1;SAF=405;SAP=882.457;SAR=0;SRF=198;SRP=432.962;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:95:42,53:42:1691:53:2107:-161.22,0,-123.807 0/1:203:53,150:53:2133:150:5980:-476.87,0,-131.039 0/1:128:25,103:25:1006:103:4092:-329.725,0,-52.3026 0/1:132:51,81:51:2017:81:3181:-246.632,0,-141.982 0/1:15:8,7:8:313:7:272:-20.3255,0,-24.0142 0/1:30:19,11:19:760:11:405:-27.7511,0,-59.6913 dDocent_Contig_9486 38 . G T 1299.99 . AB=0.27451;ABP=93.1051;AC=5;AF=0.416667;AN=12;AO=56;CIGAR=1X;DP=212;DPB=212;DPRA=5.1;EPP=124.613;EPPR=339.589;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2211;QR=6101;RO=155;RPL=0;RPP=124.613;RPPR=339.589;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=155;SRP=339.589;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:8:8,0:8:314:0:0:0,-2.40824,-28.6248 0/1:35:31,4:31:1232:4:158:-4.06261,0,-100.625 0/1:50:39,10:39:1541:10:396:-20.8375,0,-123.777 0/1:46:41,5:41:1591:5:187:-3.34191,0,-129.586 0/1:36:12,24:12:474:24:950:-74.9644,0,-32.1721 0/1:37:24,13:24:949:13:520:-36.0101,0,-74.5761 dDocent_Contig_9487 29 . T C 1163.66 . AB=0.220472;ABP=175.394;AC=6;AF=0.5;AN=12;AO=56;CIGAR=1X;DP=254;DPB=254;DPRA=0;EPP=124.613;EPPR=424.32;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.964286;PAIREDR=0.984848;PAO=0;PQA=0;PQR=0;PRO=0;QA=2243;QR=7834;RO=198;RPL=0;RPP=124.613;RPPR=432.962;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=197;SRP=424.32;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:32,4:32:1257:4:162:-4.12988,0,-102.569 0/1:50:44,6:44:1737:6:243:-7.19647,0,-141.507 0/1:30:20,10:20:788:10:398:-27.1475,0,-62.2049 0/1:72:55,17:55:2184:17:673:-39.2274,0,-175.067 0/1:30:20,10:20:791:10:404:-27.6895,0,-62.4795 0/1:36:27,9:27:1077:9:363:-22.1967,0,-86.3846 dDocent_Contig_9488 12 . G A 303.606 . AB=0.202703;ABP=59.8207;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=317;DPB=317;DPRA=1.52263;EPP=35.5824;EPPR=658.795;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=57.9139;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990066;PAO=0;PQA=0;PQR=0;PRO=0;QA=598;QR=12041;RO=302;RPL=0;RPP=35.5824;RPPR=658.795;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=302;SRP=658.795;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:1007:0:0:0,-7.52575,-90.9241 0/0:92:92,0:92:3661:0:0:0,-27.6948,-318.347 0/0:29:29,0:29:1177:0:0:0,-8.72987,-106.204 0/0:74:74,0:74:2956:0:0:0,-22.2762,-245.696 0/0:23:23,0:23:876:0:0:0,-6.92369,-79.1329 0/1:74:59,15:59:2364:15:598:-31.8834,0,-190.629 dDocent_Contig_9489 15 . C T 93.1148 . AB=0.186644;ABP=501.096;AC=4;AF=0.333333;AN=12;AO=144;CIGAR=1X2M1X;DP=843;DPB=843;DPRA=0;EPP=315.702;EPPR=1340.64;GTI=0;LEN=1;MEANALT=2.16667;MQM=17.4792;MQMR=36.8117;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.368506;PAO=0;PQA=0;PQR=0;PRO=0;QA=5677;QR=24397;RO=616;RPL=0;RPP=315.702;RPPR=1340.64;RPR=144;RUN=1;SAF=144;SAP=315.702;SAR=0;SRF=616;SRP=1340.64;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:129:89,22,18:89:3511:22,18:878,717:-1.36202,0,-173.774,-5.73985,-157.996,-180.713 0|1:161:118,32,11:118:4679:32,11:1246,446:-5.47385,0,-241.71,-28.4942,-238.848,-276.5 0|1:114:84,25,5:84:3350:25,5:979,193:-7.0253,0,-189.637,-26.2715,-191.128,-221.9 0|0:159:120,24,15:120:4758:24,15:941,594:0,-7.52706,-245.27,-12.8314,-229.224,-253.313 0|0:100:83,11,6:83:3303:11,6:440,245:0,-10.5109,-172.725,-16.5503,-167.609,-180.275 0|1:180:122,30,27:122:4796:30,27:1193,1085:-1.41499,0,-248.95,-2.60174,-222.46,-252.457 dDocent_Contig_9491 5 . T G 420.639 . AB=0.333333;ABP=4.45795;AC=6;AF=1;AN=6;AO=10;CIGAR=1X7I3M1X1M1X;DP=15;DPB=62.7143;DPRA=0;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1.66667;MQM=54.2;MQMR=0;NS=3;NUMALT=2;ODDS=1.38778e-17;PAIRED=0;PAIREDR=0;PAO=1;PQA=38.5;PQR=710;PRO=19;QA=359;QR=0;RO=0;RPL=0;RPP=24.725;RPPR=0;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:7:0,0,6:0:0:0,6:0,220:-19.7501,-19.7501,-19.7501,-1.80618,-1.80618,0 1|1:6:0,4,2:0:0:4,2:147,66:-17.3078,-5.30032,-4.0962,-12.0054,0,-11.4033 1|1:2:0,0,2:0:0:0,2:0,73:-6.52689,-6.52689,-6.52689,-0.60206,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_9493 7 . A G 35.4294 . AB=0.333333;ABP=4.45795;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=2M1X3M1X2M2I1X5M1X1M1I1X4M;DP=170;DPB=164.227;DPRA=0.182927;EPP=7.35324;EPPR=257.073;GTI=0;LEN=1;MEANALT=3;MQM=40;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=73;QR=4546;RO=117;RPL=0;RPP=7.35324;RPPR=257.073;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=117;SRP=257.073;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:24:16,0,0:16:612:0,0:0,0:0,-4.81648,-55.0523,-4.81648,-55.0523,-55.0523 0|0:42:28,0,0:28:1102:0,0:0,0:0,-8.42884,-99.114,-8.42884,-99.114,-99.114 0|0:16:10,0,0:10:395:0,0:0,0:0,-3.0103,-35.5409,-3.0103,-35.5409,-35.5409 0|0:49:36,0,0:36:1396:0,0:0,0:0,-10.8371,-125.543,-10.8371,-125.543,-125.543 0|1:6:2,2,0:2:79:2,0:73,0:-5.06566,0,-5.91126,-5.66772,-6.51332,-12.1804 0|0:33:25,0,2:25:962:0,2:0,80:0,-7.52575,-86.5144,-1.46933,-80.459,-79.857 dDocent_Contig_9494 7 . A T 116.626 . AB=0.0952381;ABP=32.8939;AC=4;AF=0.333334;AN=12;AO=2;CIGAR=1M1X2M3X1M1X1M1X1M2D1X6M;DP=113;DPB=105;DPRA=1.18868;EPP=7.35324;EPPR=92.0407;GTI=0;LEN=1;MEANALT=7;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=80;QR=1582;RO=41;RPL=0;RPP=7.35324;RPPR=92.0407;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=41;SRP=92.0407;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:21:7,0,0,2,0:7:269:0,0,2,0:0,0,80,0:-4.48721,-6.59442,-28.679,-6.59442,-28.679,-28.679,0,-22.0865,-22.0865,-21.4844,-6.59442,-28.679,-28.679,-22.0865,-28.679 0|0:24:7,3,0,0,4:7:262:3,0,0,4:119,0,0,133:-8.64031,-0.946164,-21.5002,-10.7475,-22.4033,-32.2027,-10.7475,-22.4033,-32.2027,-32.2027,0,-11.6523,-21.4511,-21.4511,-20.247 0|0:16:11,0,0,0,0:11:428:0,0,0,0:0,0,0,0:0,-3.31133,-38.4989,-3.31133,-38.4989,-38.4989,-3.31133,-38.4989,-38.4989,-38.4989,-3.31133,-38.4989,-38.4989,-38.4989,-38.4989 0|0:23:7,0,0,0,0:7:273:0,0,0,0:0,0,0,0:0,-2.10721,-24.5502,-2.10721,-24.5502,-24.5502,-2.10721,-24.5502,-24.5502,-24.5502,-2.10721,-24.5502,-24.5502,-24.5502,-24.5502 1|1:14:0,0,0,0,0:0:0:0,0,0,0:0,0,0,0:0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 0|1:15:9,0,2,0,0:9:350:0,2,0,0:0,76,0,0:-3.52446,-6.23373,-35.0029,0,-28.7707,-28.1686,-6.23373,-35.0029,-28.7707,-35.0029,-6.23373,-35.0029,-28.7707,-35.0029,-35.0029 dDocent_Contig_9495 8 . C A 654.236 . AB=0.0416667;ABP=134.384;AC=0;AF=0;AN=12;AO=3;CIGAR=1M3I2M5D1M1X1M2X8M;DP=164;DPB=156.381;DPRA=0;EPP=9.52472;EPPR=200.614;GTI=0;LEN=1;MEANALT=7.5;MQM=60;MQMR=60;NS=6;NUMALT=8;ODDS=0;PAIRED=1;PAIREDR=0.813187;PAO=1;PQA=33.3333;PQR=33.3333;PRO=1;QA=118;QR=3526;RO=91;RPL=0;RPP=9.52472;RPPR=200.614;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=91;SRP=200.614;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:18:12,0,2,0,1,0,1,0,0:12:462:0,2,0,1,0,1,0,0:0,68,0,40,0,40,0,0:-1.88679,-5.49915,-43.4377,0,-37.9273,-37.3253,-5.49915,-43.4377,-37.9273,-43.4377,-2.19867,-40.1415,-34.6313,-40.1415,-39.8405,-5.49915,-43.4377,-37.9273,-43.4377,-40.1415,-43.4377,-2.19867,-40.1415,-34.6313,-40.1415,-36.8452,-40.1415,-39.8405,-5.49915,-43.4377,-37.9273,-43.4377,-40.1415,-43.4377,-40.1415,-43.4377,-5.49915,-43.4377,-37.9273,-43.4377,-40.1415,-43.4377,-40.1415,-43.4377,-43.4377 0|0:42:27,1,2,0,2,0,5,0,1:27:1049:1,2,0,2,0,5,0,1:40,74,0,78,0,197,0,38:-8.06412,-12.8961,-98.7898,-10.141,-93.0378,-95.731,-16.1919,-99.0908,-96.3331,-102.386,-9.78019,-92.679,-89.9213,-95.9744,-95.3723,-16.1919,-99.0908,-96.3331,-102.386,-95.9744,-102.386,0,-82.9,-80.1424,-86.1954,-79.7835,-86.1954,-84.6902,-16.1919,-99.0908,-96.3331,-102.386,-95.9744,-102.386,-86.1954,-102.386,-13.0761,-95.9745,-93.2168,-99.2699,-92.8581,-99.2699,-83.0791,-99.2699,-98.9689 0|0:22:10,0,0,0,1,0,10,0,0:10:384:0,0,0,1,0,10,0,0:0,0,0,28,0,388,0,0:-29.0402,-32.0505,-63.5805,-32.0505,-63.5805,-63.5805,-32.0505,-63.5805,-63.5805,-63.5805,-29.8384,-61.366,-61.366,-61.366,-61.0649,-32.0505,-63.5805,-63.5805,-63.5805,-61.366,-63.5805,0,-31.6858,-31.6858,-31.6858,-29.4735,-31.6858,-28.6755,-32.0505,-63.5805,-63.5805,-63.5805,-61.366,-63.5805,-31.6858,-63.5805,-32.0505,-63.5805,-63.5805,-63.5805,-61.366,-63.5805,-31.6858,-63.5805,-63.5805 0|0:30:16,2,3,2,0,3,2,0,0:16:618:2,3,2,0,3,2,0,0:78,105,74,0,97,79,0,0:-3.72614,-2.12459,-52.2994,0,-44.3605,-49.8706,-2.48563,-46.8474,-44.7198,-52.6586,-8.54262,-52.9015,-50.7737,-53.2606,-59.3146,-0.767239,-45.1235,-42.9963,-45.4828,-51.5364,-50.6333,-2.03456,-46.3985,-44.2709,-46.7578,-52.8119,-45.0339,-52.2099,-8.54262,-52.9015,-50.7737,-53.2606,-59.3146,-51.5364,-52.8119,-59.3146,-8.54262,-52.9015,-50.7737,-53.2606,-59.3146,-51.5364,-52.8119,-59.3146,-59.3146 0|0:24:13,0,1,0,3,0,1,2,0:13:508:0,1,0,3,0,1,2,0:0,37,0,120,0,38,78,0:-5.97536,-9.88875,-51.6521,-6.86378,-48.626,-48.325,-9.88875,-51.6521,-48.626,-51.6521,0,-41.7656,-38.7395,-41.7656,-40.8625,-9.88875,-51.6521,-48.626,-51.6521,-41.7656,-51.6521,-6.77329,-48.5361,-45.51,-48.5361,-38.6495,-48.5361,-48.2351,-3.47728,-45.2406,-42.2146,-45.2406,-35.3539,-45.2406,-42.1246,-44.6386,-9.88875,-51.6521,-48.626,-51.6521,-41.7656,-51.6521,-48.5361,-45.2406,-51.6521 0|0:28:13,0,0,0,1,0,10,0,2:13:505:0,0,0,1,0,10,0,2:0,0,0,39,0,386,0,80:-27.7733,-31.6866,-73.182,-31.6866,-73.182,-73.182,-31.6866,-73.182,-73.182,-73.182,-28.4808,-69.9761,-69.9761,-69.9761,-69.6751,-31.6866,-73.182,-73.182,-73.182,-69.9761,-73.182,0,-41.4874,-41.4874,-41.4874,-38.2816,-41.4874,-38.4771,-31.6866,-73.182,-73.182,-73.182,-69.9761,-73.182,-41.4874,-73.182,-25.0951,-66.591,-66.591,-66.591,-63.3851,-66.591,-34.8962,-66.591,-65.989 dDocent_Contig_9496 7 . A T 108.742 . AB=0.0714286;ABP=70.0157;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=2M1X1M1X4M2X3M3I1M1X2M2I4M;DP=163;DPB=158;DPRA=1.82609;EPP=9.52472;EPPR=152.842;GTI=0;LEN=1;MEANALT=13;MQM=40;MQMR=60;NS=6;NUMALT=5;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=117;QR=2712;RO=69;RPL=0;RPP=9.52472;RPPR=152.842;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=69;SRP=152.842;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:23:7,1,0,0,3,0:7:277:1,0,0,3,0:37,0,0,117,0:-6.84302,-6.0783,-28.5977,-8.95023,-28.8987,-31.7691,-8.95023,-28.8987,-31.7691,-31.7691,0,-19.9545,-22.8251,-22.8251,-21.922,-8.95023,-28.8987,-31.7691,-31.7691,-22.8251,-31.7691 0|1:42:15,2,0,3,0,2:15:580:2,0,3,0,2:74,0,117,0,80:-4.42949,-3.20327,-50.2594,-8.94494,-50.8614,-56.6017,0,-41.9192,-47.6595,-46.7564,-8.94494,-50.8614,-56.6017,-47.6595,-56.6017,-2.88615,-44.8045,-50.5448,-41.6025,-50.5448,-49.9428 0|0:16:3,0,2,0,0,0:3:118:0,2,0,0,0:0,74,0,0,0:-4.82077,-5.72386,-15.4403,0,-9.71823,-9.11617,-5.72386,-15.4403,-9.71823,-15.4403,-5.72386,-15.4403,-9.71823,-15.4403,-15.4403,-5.72386,-15.4403,-9.71823,-15.4403,-15.4403,-15.4403 0|0:36:18,0,0,0,2,0:18:709:0,0,0,2,0:0,0,0,77,0:-0.494887,-5.91343,-64.2798,-5.91343,-64.2798,-64.2798,-5.91343,-64.2798,-64.2798,-64.2798,0,-58.3713,-58.3713,-58.3713,-57.7692,-5.91343,-64.2798,-64.2798,-64.2798,-58.3713,-64.2798 0|0:18:12,0,0,0,0,0:12:478:0,0,0,0,0:0,0,0,0,0:0,-3.61236,-43.0381,-3.61236,-43.0381,-43.0381,-3.61236,-43.0381,-43.0381,-43.0381,-3.61236,-43.0381,-43.0381,-43.0381,-43.0381,-3.61236,-43.0381,-43.0381,-43.0381,-43.0381,-43.0381 0|0:28:14,0,0,0,0,0:14:550:0,0,0,0,0:0,0,0,0,0:0,-4.21442,-49.4811,-4.21442,-49.4811,-49.4811,-4.21442,-49.4811,-49.4811,-49.4811,-4.21442,-49.4811,-49.4811,-49.4811,-49.4811,-4.21442,-49.4811,-49.4811,-49.4811,-49.4811,-49.4811 dDocent_Contig_9497 24 . C A 2447.09 . AB=0.296407;ABP=123.26;AC=4;AF=0.333333;AN=12;AO=99;CIGAR=1X;DP=572;DPB=572;DPRA=0.701681;EPP=217.986;EPPR=1030.12;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.985201;PAO=0;PQA=0;PQR=0;PRO=0;QA=3903;QR=18659;RO=473;RPL=0;RPP=217.986;RPPR=1030.12;RPR=99;RUN=1;SAF=99;SAP=217.986;SAR=0;SRF=473;SRP=1030.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:67:41,26:41:1586:26:1044:-74.0816,0,-122.799 0/1:74:57,17:57:2240:17:676:-38.8964,0,-179.504 0/1:55:41,14:41:1631:14:547:-33.014,0,-130.461 0/1:138:96,42:96:3779:42:1636:-105.939,0,-298.595 0/0:114:114,0:114:4508:0:0:0,-34.3174,-405.655 0/0:124:124,0:124:4915:0:0:0,-37.3277,-442.257 dDocent_Contig_9498 13 . G A 1573.74 . AB=0.143036;ABP=885.116;AC=4;AF=0.333333;AN=12;AO=131;CIGAR=1X;DP=1191;DPB=1191;DPRA=1.10164;EPP=287.473;EPPR=2304.77;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5147;QR=42073;RO=1060;RPL=0;RPP=287.473;RPPR=2304.77;RPR=131;RUN=1;SAF=131;SAP=287.473;SAR=0;SRF=1060;SRP=2304.77;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:164:146,18:146:5789:18:725:-16.2074,0,-471.455 0/0:211:194,17:194:7692:17:665:0,-3.34202,-631.725 0/1:160:138,22:138:5431:22:877:-31.0763,0,-440.472 0/1:223:187,36:187:7413:36:1384:-57.6808,0,-599.688 0/0:183:183,0:183:7269:0:0:0,-55.0885,-653.866 0/1:250:212,38:212:8479:38:1496:-59.631,0,-687.373 dDocent_Contig_9499 28 . G T 44.76 . AB=0.128205;ABP=49.8362;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=237;DPB=237;DPRA=0.984848;EPP=13.8677;EPPR=506.792;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.823276;PAO=0;PQA=0;PQR=0;PRO=0;QA=193;QR=9201;RO=232;RPL=0;RPP=13.8677;RPPR=506.792;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=232;SRP=506.792;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:42:42,0:42:1669:0:0:0,-12.6433,-150.437 0/0:42:42,0:42:1676:0:0:0,-12.6433,-151.059 0/0:41:41,0:41:1621:0:0:0,-12.3422,-146.121 0/1:39:34,5:34:1340:5:193:-5.99886,0,-109.122 0/0:39:39,0:39:1540:0:0:0,-11.7402,-138.836 0/0:34:34,0:34:1355:0:0:0,-10.235,-122.211 dDocent_Contig_9500 60 . T C 3665.05 . AB=0.428571;ABP=17.28;AC=6;AF=0.5;AN=12;AO=138;CIGAR=1X;DP=322;DPB=322;DPRA=0;EPP=229.599;EPPR=402.561;GTI=0;LEN=1;MEANALT=1;MQM=59.529;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5256;QR=6764;RO=184;RPL=129;RPP=229.599;RPPR=402.561;RPR=9;RUN=1;SAF=0;SAP=302.673;SAR=138;SRF=184;SRP=402.561;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:24,11:24:884:11:400:-25.7976,0,-69.3466 0/1:104:60,44:60:2202:44:1676:-119.672,0,-167.129 0/1:40:21,19:21:775:19:719:-52.9876,0,-58.0373 0/1:70:41,29:41:1509:29:1111:-79.212,0,-115.029 0/1:23:12,11:12:436:11:417:-30.951,0,-32.6586 0/1:50:26,24:26:958:24:933:-69.1077,0,-71.4874 dDocent_Contig_9501 155 . A T 193.049 . AB=0.215686;ABP=38.8183;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=140;DPB=140;DPRA=1.14607;EPP=26.8965;EPPR=283.13;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=413;QR=4256;RO=129;RPL=0;RPP=26.8965;RPPR=283.13;RPR=11;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=283.13;SRR=129;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:751:0:0:0,-6.92369,-67.8871 0/0:16:16,0:16:536:0:0:0,-4.81648,-48.5491 0/0:41:41,0:41:1346:0:0:0,-12.3422,-121.42 0/1:5:4,1:4:120:1:32:-1.69416,0,-9.59223 0/1:46:36,10:36:1198:10:381:-20.7933,0,-94.2583 0/0:9:9,0:9:305:0:0:0,-2.70927,-27.7763 dDocent_Contig_9502 28 . C T 263.123 . AB=0.454545;ABP=3.40511;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=90;DPB=90;DPRA=1.61765;EPP=24.725;EPPR=176.728;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=379;QR=3219;RO=80;RPL=0;RPP=24.725;RPPR=176.728;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=80;SRP=176.728;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:366:0:0:0,-2.70927,-33.3049 0/0:14:14,0:14:562:0:0:0,-4.21442,-50.9226 0/0:9:9,0:9:363:0:0:0,-2.70927,-33.0349 0/0:33:33,0:33:1326:0:0:0,-9.93399,-119.598 0/1:22:12,10:12:479:10:379:-27.8351,0,-36.8359 0/0:3:3,0:3:123:0:0:0,-0.90309,-11.4648 dDocent_Contig_9503 35 . G A 60.6743 . AB=0.12;ABP=97.0785;AC=3;AF=0.25;AN=12;AO=9;CIGAR=1X;DP=148;DPB=148;DPRA=1.0274;EPP=22.5536;EPPR=304.845;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.532374;PAO=0;PQA=0;PQR=0;PRO=0;QA=363;QR=5488;RO=139;RPL=0;RPP=22.5536;RPPR=304.845;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=139;SRP=304.845;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:914:0:0:0,-7.22472,-82.568 0/1:30:27,3:27:1075:3:123:-2.43389,0,-88.0068 0/1:25:22,3:22:886:3:123:-3.93904,0,-72.5207 0/1:20:17,3:17:664:3:117:-4.88961,0,-54.0694 0/0:28:28,0:28:1116:0:0:0,-8.42884,-100.725 0/0:21:21,0:21:833:0:0:0,-6.32163,-75.2797 dDocent_Contig_9504 16 . A C 132.02 . AB=0.0957096;ABP=433.184;AC=1;AF=0.0833333;AN=12;AO=32;CIGAR=1X;DP=1229;DPB=1229;DPRA=1.74125;EPP=72.4974;EPPR=2600.09;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1295;QR=47812;RO=1196;RPL=0;RPP=72.4974;RPPR=2600.09;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=1196;SRP=2600.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:151:151,0:151:6029:0:0:0,-45.4555,-542.375 0/0:141:141,0:141:5673:0:0:0,-42.4452,-510.371 0/0:116:116,0:116:4621:0:0:0,-34.9195,-415.809 0/0:249:248,0:248:9909:0:0:0,-74.6554,-890.755 0/1:303:274,29:274:10924:29:1174:-14.7249,0,-891.204 0/0:269:266,3:266:10656:3:121:0,-69.6971,-947.031 dDocent_Contig_9505 108 . G A 820.454 . AB=0.220339;ABP=163.331;AC=1;AF=0.0833333;AN=12;AO=60;CIGAR=1X;DP=1034;DPB=1034;DPRA=1.3088;EPP=133.299;EPPR=2109.34;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1979;QR=32062;RO=970;RPL=0;RPP=133.299;RPPR=2109.34;RPR=60;RUN=1;SAF=0;SAP=133.299;SAR=60;SRF=0;SRP=2109.34;SRR=970;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:114:114,0:114:3801:0:0:0,-34.3174,-342.311 0/0:169:169,0:169:5526:0:0:0,-50.8741,-497.506 0/0:117:117,0:117:3905:0:0:0,-35.2205,-351.662 0/0:225:223,0:223:7343:0:0:0,-67.1297,-660.77 0/0:173:165,8:165:5470:8:270:0,-27.4489,-467.838 0/1:236:182,52:182:6017:52:1709:-83.5683,0,-471.165 dDocent_Contig_9506 17 . G A 300.58 . AB=0.208333;ABP=56.2114;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=387;DPB=387;DPRA=1.35065;EPP=39.9253;EPPR=596.491;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8108;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.632432;PAO=0;PQA=0;PQR=0;PRO=0;QA=668;QR=14714;RO=370;RPL=0;RPP=39.9253;RPPR=806.455;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=344;SRP=596.491;SRR=26;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:45:45,0:45:1786:0:0:0,-13.5463,-160.948 0/0:66:66,0:66:2611:0:0:0,-19.868,-235.125 0/0:57:57,0:57:2291:0:0:0,-17.1587,-206.346 0/0:63:63,0:63:2515:0:0:0,-18.9649,-226.492 0/0:84:82,2:82:3268:2:80:0,-17.6947,-286.461 0/1:72:57,15:57:2243:15:588:-31.5809,0,-180.339 dDocent_Contig_9507 14 . G T 373.554 . AB=0.25974;ABP=41.6174;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=176;DPB=176;DPRA=1.55556;EPP=46.4397;EPPR=341.76;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.974359;PAO=0;PQA=0;PQR=0;PRO=0;QA=701;QR=6247;RO=156;RPL=0;RPP=46.4397;RPPR=341.76;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=156;SRP=341.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:953:0:0:0,-7.22472,-86.0703 0/0:19:19,0:19:766:0:0:0,-5.71957,-69.2604 0/0:29:29,0:29:1173:0:0:0,-8.72987,-105.844 0/0:27:27,0:27:1067:0:0:0,-8.12781,-96.3138 0/1:36:24,12:24:971:12:413:-26.6545,0,-76.8479 0/1:41:33,8:33:1317:8:288:-13.9227,0,-106.446 dDocent_Contig_9508 74 . A T 135.622 . AB=0.133758;ABP=185.926;AC=4;AF=0.4;AN=10;AO=21;CIGAR=1X;DP=166;DPB=166;DPRA=4.36111;EPP=48.6112;EPPR=317.874;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.986207;PAO=0;PQA=0;PQR=0;PRO=0;QA=723;QR=5003;RO=145;RPL=21;RPP=48.6112;RPPR=317.874;RPR=0;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=145;SRP=317.874;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:38,4:38:1319:4:140:-0.301669,0,-106.368 0/1:46:40,6:40:1371:6:202:-4.66343,0,-109.842 0/1:28:23,5:23:789:5:171:-7.29761,0,-62.8987 0/1:41:35,6:35:1212:6:210:-6.90023,0,-97.0432 ./.:.:.:.:.:.:.:. 0/0:9:9,0:9:312:0:0:0,-2.70927,-28.4161 dDocent_Contig_9509 19 . T A 187.899 . AB=0.188679;ABP=47.6279;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=436;DPB=436;DPRA=0.89701;EPP=33.4109;EPPR=917.2;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=557;QR=16872;RO=421;RPL=0;RPP=33.4109;RPPR=917.2;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=421;SRP=917.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:890:0:0:0,-6.62266,-80.407 0/0:29:29,0:29:1166:0:0:0,-8.72987,-105.219 0/1:53:43,10:43:1728:10:399:-20.3128,0,-139.778 0/0:82:78,4:78:3099:4:158:0,-10.084,-264.386 0/0:108:107,0:107:4286:0:0:0,-32.2102,-385.587 0/0:142:142,0:142:5703:0:0:0,-42.7463,-513.067 dDocent_Contig_9510 15 . A G 49.5201 . AB=0.113208;ABP=71.8828;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=179;DPB=179;DPRA=2.10317;EPP=16.0391;EPPR=378.675;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.578035;PAO=0;PQA=0;PQR=0;PRO=0;QA=245;QR=6701;RO=173;RPL=0;RPP=16.0391;RPPR=378.675;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=173;SRP=378.675;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:390:0:0:0,-3.0103,-35.4562 0/0:39:39,0:39:1472:0:0:0,-11.7402,-132.742 0/0:23:23,0:23:895:0:0:0,-6.92369,-80.8575 0/1:53:47,6:47:1844:6:245:-6.47488,0,-150.223 0/0:34:34,0:34:1323:0:0:0,-10.235,-119.342 0/0:20:20,0:20:777:0:0:0,-6.0206,-70.2483 dDocent_Contig_9511 147 . C G 224.484 . AB=0.212121;ABP=50.5195;AC=3;AF=0.3;AN=10;AO=14;CIGAR=1X;DP=97;DPB=97;DPRA=1.41935;EPP=33.4109;EPPR=183.243;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=517;QR=2986;RO=83;RPL=0;RPP=33.4109;RPPR=183.243;RPR=14;RUN=1;SAF=0;SAP=33.4109;SAR=14;SRF=0;SRP=183.243;SRR=83;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:20,6:20:730:6:221:-12.42,0,-58.2014 0/0:11:11,0:11:402:0:0:0,-3.31133,-36.5256 0/1:27:21,6:21:769:6:222:-12.2103,0,-61.4098 0/0:20:20,0:20:695:0:0:0,-6.0206,-62.8655 ./.:.:.:.:.:.:.:. 0/1:13:11,2:11:390:2:74:-3.11249,0,-31.5239 dDocent_Contig_9512 58 . T G 1218.48 . AB=0.258216;ABP=111.166;AC=6;AF=0.5;AN=12;AO=55;CIGAR=1X;DP=213;DPB=213;DPRA=0;EPP=122.441;EPPR=343.931;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.890909;PAIREDR=0.579618;PAO=0;PQA=0;PQR=0;PRO=0;QA=2151;QR=5686;RO=157;RPL=55;RPP=122.441;RPPR=343.931;RPR=0;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=157;SRP=343.931;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:21,2:21:749:2:81:-0.762044,0,-60.7992 0/1:39:30,9:30:1085:9:353:-20.3904,0,-86.2123 0/1:27:14,13:14:531:13:493:-36.5769,0,-40.0039 0/1:47:33,13:33:1178:13:500:-31.3899,0,-92.3755 0/1:36:29,7:29:1028:7:282:-14.9155,0,-81.9776 0/1:41:30,11:30:1115:11:442:-27.7932,0,-88.3037 dDocent_Contig_9513 1 . N G 540.469 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=14;CIGAR=1X;DP=14;DPB=14;DPRA=0;EPP=33.4109;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=565;QR=0;RO=0;RPL=0;RPP=33.4109;RPPR=0;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:80:-7.59179,-0.60206,0 1/1:3:0,3:0:0:3:120:-11.1879,-0.90309,0 1/1:3:0,3:0:0:3:121:-11.2802,-0.90309,0 1/1:1:0,1:0:0:1:39:-3.89656,-0.30103,0 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 1/1:3:0,3:0:0:3:123:-11.4648,-0.90309,0 dDocent_Contig_9514 97 . T C 390.405 . AB=0.225;ABP=81.8347;AC=2;AF=0.166667;AN=12;AO=44;CIGAR=1X;DP=387;DPB=387;DPRA=1.348;EPP=98.5551;EPPR=747.825;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.409091;PAIREDR=0.466472;PAO=0;PQA=0;PQR=0;PRO=0;QA=1428;QR=11678;RO=343;RPL=44;RPP=98.5551;RPPR=747.825;RPR=0;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=343;SRP=747.825;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:50,0:50:1669:0:0:0,-15.0515,-150.495 0/0:51:49,2:49:1675:2:66:0,-9.08435,-144.77 0/1:44:36,8:36:1230:8:271:-11.4753,0,-97.757 0/1:76:57,19:57:1942:19:593:-30.787,0,-152.181 0/0:78:71,7:71:2418:7:227:0,-2.73206,-197.134 0/0:88:80,8:80:2744:8:271:0,-1.77019,-222.495 dDocent_Contig_9515 23 . A G 1077.41 . AB=0.367521;ABP=20.8461;AC=5;AF=0.416667;AN=12;AO=43;CIGAR=1X;DP=139;DPB=139;DPRA=1.06364;EPP=96.3836;EPPR=211.472;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1671;QR=3813;RO=96;RPL=0;RPP=96.3836;RPPR=211.472;RPR=43;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=96;SRP=211.472;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:39:24,15:24:956:15:557:-38.7098,0,-74.5998 0/1:35:26,9:26:1031:9:350:-21.3195,0,-82.5431 0/1:14:8,6:8:324:6:244:-18.1244,0,-25.3144 0/1:22:12,10:12:480:10:403:-30.0068,0,-36.9273 0/1:7:4,3:4:147:3:117:-8.80208,0,-11.4783 0/0:22:22,0:22:875:0:0:0,-6.62266,-79.0553 dDocent_Contig_9516 16 . T G 76.1629 . AB=0.16129;ABP=33.9012;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=147;DPB=147;DPRA=1.33621;EPP=13.8677;EPPR=311.359;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.915493;PAO=0;PQA=0;PQR=0;PRO=0;QA=201;QR=5707;RO=142;RPL=0;RPP=13.8677;RPPR=311.359;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=142;SRP=311.359;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:478:0:0:0,-3.61236,-43.3665 0/0:26:26,0:26:1046:0:0:0,-7.82678,-94.4304 0/0:20:20,0:20:815:0:0:0,-6.0206,-73.6642 0/1:31:26,5:26:1047:5:201:-9.13917,0,-85.1901 0/0:35:35,0:35:1391:0:0:0,-10.536,-125.448 0/0:23:23,0:23:930:0:0:0,-6.92369,-84.0034 dDocent_Contig_9517 77 . C G 741.88 . AB=0.259259;ABP=16.6021;AC=3;AF=0.25;AN=12;AO=28;CIGAR=1X;DP=479;DPB=479;DPRA=1.53439;EPP=63.8115;EPPR=980.173;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8867;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=951;QR=15311;RO=450;RPL=28;RPP=63.8115;RPPR=980.173;RPR=0;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=450;SRP=980.173;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:27:20,7:20:668:7:234:-13.2589,0,-52.3054 0/0:25:25,0:25:841:0:0:0,-7.52575,-76.0003 0/0:17:16,0:16:549:0:0:0,-4.81648,-47.8203 1/1:20:0,20:0:0:20:687:-62.151,-6.0206,0 0/0:147:147,0:147:4992:0:0:0,-44.2514,-449.459 0/0:243:242,1:242:8261:1:30:0,-70.1507,-740.567 dDocent_Contig_9518 8 . C T 1541.74 . AB=0.482759;ABP=3.30981;AC=3;AF=0.25;AN=12;AO=73;CIGAR=1X;DP=454;DPB=454;DPRA=0;EPP=161.528;EPPR=825.998;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0;PAIREDR=0.897098;PAO=0;PQA=0;PQR=0;PRO=0;QA=2805;QR=14527;RO=379;RPL=0;RPP=161.528;RPPR=825.998;RPR=73;RUN=1;SAF=73;SAP=161.528;SAR=0;SRF=379;SRP=825.998;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:13,1:13:484:1:39:0,-0.317855,-40.002 0/1:30:8,22:8:310:22:837:-66.6209,0,-19.2327 0/1:38:19,19:19:727:19:727:-54.321,0,-54.3209 0/1:48:33,15:33:1274:15:584:-38.4538,0,-100.5 0/0:127:123,4:123:4719:4:154:0,-23.9972,-410.515 0/0:197:183,12:183:7013:12:464:0,-16.9784,-588.926 dDocent_Contig_9519 9 . C T 5339.46 . AB=0.283217;ABP=236.497;AC=7;AF=0.583333;AN=12;AO=211;CIGAR=1X;DP=625;DPB=625;DPRA=0;EPP=461.191;EPPR=899.828;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=59.8547;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995157;PAO=0;PQA=0;PQR=0;PRO=0;QA=8085;QR=15589;RO=413;RPL=0;RPP=461.191;RPPR=899.828;RPR=211;RUN=1;SAF=211;SAP=461.191;SAR=0;SRF=413;SRP=899.828;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:116:94,22:94:3542:22:851:-41.9932,0,-283.997 0/1:127:90,37:90:3362:37:1411:-89.0386,0,-264.502 0/1:109:81,28:81:3042:28:1078:-64.5124,0,-241.05 0/1:141:107,34:107:4061:34:1294:-74.3053,0,-323.03 1/1:53:4,49:4:151:49:1879:-155.4,-1.99724,0 0/1:79:37,41:37:1431:41:1572:-117.918,0,-105.237 dDocent_Contig_9520 17 . T G 9347.76 . AB=0.595238;ABP=39.4083;AC=7;AF=0.583333;AN=12;AO=308;CIGAR=1X;DP=496;DPB=496;DPRA=0;EPP=671.824;EPPR=409.076;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.993506;PAIREDR=0.994652;PAO=0;PQA=0;PQR=0;PRO=0;QA=12065;QR=7339;RO=187;RPL=0;RPP=671.824;RPPR=409.076;RPR=308;RUN=1;SAF=308;SAP=671.824;SAR=0;SRF=187;SRP=409.076;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:80:33,46:33:1303:46:1763:-134.85,0,-93.4955 0/1:113:47,66:47:1867:66:2604:-200.487,0,-134.23 0/1:142:46,96:46:1795:96:3772:-296.739,0,-119.025 0/1:112:52,60:52:2019:60:2374:-180.107,0,-148.2 0/1:15:8,7:8:315:7:280:-21.0552,0,-24.1985 1/1:34:1,33:1:40:33:1272:-110.759,-6.23934,0 dDocent_Contig_9521 1 . N G 76.8682 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_9522 39 . C A 169.227 . AB=0.666667;ABP=5.18177;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=111;DPB=111;DPRA=0.441176;EPP=16.0391;EPPR=231.015;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=231;QR=4240;RO=105;RPL=0;RPP=16.0391;RPPR=231.015;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=105;SRP=231.015;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:846:0:0:0,-6.32163,-76.4508 0/0:10:10,0:10:404:0:0:0,-3.0103,-36.7202 0/0:26:26,0:26:1050:0:0:0,-7.82678,-94.7881 0/0:36:36,0:36:1460:0:0:0,-10.8371,-131.644 0/1:9:3,6:3:121:6:231:-18.4456,0,-8.57093 0/0:9:9,0:9:359:0:0:0,-2.70927,-32.6705 dDocent_Contig_9523 74 . C A 202.985 . AB=0.2;ABP=49.9141;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=230;DPB=230;DPRA=0.916667;EPP=37.7539;EPPR=467.705;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.82243;PAO=0;PQA=0;PQR=0;PRO=0;QA=607;QR=8126;RO=214;RPL=8;RPP=3.0103;RPPR=3.65971;RPR=8;RUN=1;SAF=8;SAP=3.0103;SAR=8;SRF=111;SRP=3.65971;SRR=103;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:740:0:0:0,-6.0206,-66.9211 0/1:40:32,8:32:1193:8:303:-15.5837,0,-95.6158 0/1:20:16,4:16:632:4:151:-7.93653,0,-51.1953 0/0:50:46,4:46:1764:4:153:0,-0.911213,-144.861 0/0:49:49,0:49:1859:0:0:0,-14.7505,-167.539 0/0:51:51,0:51:1938:0:0:0,-15.3525,-174.654 dDocent_Contig_9524 195 . T C 488.33 . AB=0.45;ABP=3.87889;AC=3;AF=0.25;AN=12;AO=18;CIGAR=1X;DP=102;DPB=102;DPRA=0.645161;EPP=42.0968;EPPR=185.414;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.944444;PAIREDR=0.940476;PAO=0;PQA=0;PQR=0;PRO=0;QA=712;QR=3402;RO=84;RPL=18;RPP=42.0968;RPPR=185.414;RPR=0;RUN=1;SAF=0;SAP=42.0968;SAR=18;SRF=0;SRP=185.414;SRR=84;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:9:8,1:8:324:1:38:-1.088,0,-26.819 0/0:12:12,0:12:487:0:0:0,-3.61236,-44.1811 0/1:13:7,6:7:283:6:234:-17.5123,0,-21.93 0/1:18:7,11:7:286:11:440:-34.5337,0,-20.6963 0/0:13:13,0:13:526:0:0:0,-3.91339,-47.6859 0/0:37:37,0:37:1496:0:0:0,-11.1381,-134.881 dDocent_Contig_9525 13 . C T 896.525 . AB=0.270073;ABP=65.9196;AC=2;AF=0.166667;AN=12;AO=39;CIGAR=1X;DP=329;DPB=329;DPRA=1.51145;EPP=87.6977;EPPR=632.737;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1561;QR=11547;RO=290;RPL=0;RPP=87.6977;RPPR=632.737;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=290;SRP=632.737;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:55:44,11:44:1730:11:437:-23.1271,0,-139.359 0/1:82:56,26:56:2248:26:1046:-69.7473,0,-177.798 0/0:61:59,2:59:2351:2:78:0,-10.9595,-204.345 0/0:72:72,0:72:2908:0:0:0,-21.6742,-261.81 0/0:9:9,0:9:361:0:0:0,-2.70927,-32.8541 0/0:50:50,0:50:1949:0:0:0,-15.0515,-175.608 dDocent_Contig_9527 133 . G A 1167.63 . AB=0.305882;ABP=58.6511;AC=4;AF=0.333333;AN=12;AO=70;CIGAR=1X;DP=515;DPB=515;DPRA=0;EPP=155.013;EPPR=967.144;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2583;QR=16768;RO=444;RPL=0;RPP=155.013;RPPR=967.144;RPR=70;RUN=1;SAF=0;SAP=155.013;SAR=70;SRF=0;SRP=967.144;SRR=444;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:22,2:22:816:2:78:-0.178753,0,-66.5236 0/1:37:31,6:31:1217:6:215:-8.55838,0,-98.679 0/1:67:33,34:33:1199:34:1254:-92.9732,0,-88.0211 0/1:42:32,10:32:1240:10:364:-20.4519,0,-99.232 0/0:166:162,3:162:6091:3:114:0,-39.2304,-537.57 0/0:179:164,15:164:6205:15:558:0,-3.32936,-507.818 dDocent_Contig_9528 10 . T A 61.273 . AB=0.16;ABP=28.1125;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=431;DPB=431;DPRA=0.807818;EPP=16.0391;EPPR=925.886;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9835;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.684706;PAO=0;PQA=0;PQR=0;PRO=0;QA=242;QR=16931;RO=425;RPL=0;RPP=16.0391;RPPR=925.886;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=425;SRP=925.886;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:21,4:21:843:4:161:-7.34915,0,-68.6567 0/0:50:50,0:50:1999:0:0:0,-15.0515,-180.1 0/0:49:49,0:49:1932:0:0:0,-14.7505,-174.082 0/0:99:97,2:97:3864:2:81:0,-22.1162,-340.08 0/0:155:155,0:155:6199:0:0:0,-46.6596,-557.666 0/0:53:53,0:53:2094:0:0:0,-15.9546,-188.639 dDocent_Contig_9529 32 . A C 385.259 . AB=0.201835;ABP=87.1798;AC=5;AF=0.416667;AN=12;AO=22;CIGAR=1X;DP=120;DPB=120;DPRA=1.98182;EPP=50.7827;EPPR=215.815;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=874;QR=3898;RO=98;RPL=0;RPP=50.7827;RPPR=215.815;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=98;SRP=215.815;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:20,3:20:790:3:120:-4.26362,0,-64.4909 0/1:31:27,4:27:1075:4:161:-5.54297,0,-87.7082 0/1:16:10,6:10:407:6:239:-17.0679,0,-32.1741 0/0:11:11,0:11:433:0:0:0,-3.31133,-39.3199 0/1:20:16,4:16:639:4:160:-8.7632,0,-51.825 0/1:19:14,5:14:554:5:194:-12.1096,0,-44.4805 dDocent_Contig_9530 17 . T C 315.62 . AB=0.217391;ABP=50.8771;AC=2;AF=0.166667;AN=12;AO=18;CIGAR=1X;DP=211;DPB=211;DPRA=1.06863;EPP=42.0968;EPPR=422.104;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.564767;PAO=0;PQA=0;PQR=0;PRO=0;QA=731;QR=7639;RO=193;RPL=0;RPP=42.0968;RPPR=422.104;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=193;SRP=422.104;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:34,4:34:1323:4:162:-3.52761,0,-107.884 0/0:40:37,3:37:1462:3:122:0,-0.668707,-120.448 0/0:21:21,0:21:841:0:0:0,-6.32163,-75.9988 0/1:31:20,11:20:796:11:447:-31.2539,0,-62.6241 0/0:30:30,0:30:1170:0:0:0,-9.0309,-105.564 0/0:51:51,0:51:2047:0:0:0,-15.3525,-184.415 dDocent_Contig_9531 11 . G A 2188.33 . AB=0.220044;ABP=315.48;AC=4;AF=0.333333;AN=12;AO=112;CIGAR=1X;DP=729;DPB=729;DPRA=0;EPP=246.215;EPPR=1340.64;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99513;PAO=0;PQA=0;PQR=0;PRO=0;QA=4480;QR=24412;RO=616;RPL=0;RPP=246.215;RPPR=1340.64;RPR=112;RUN=1;SAF=112;SAP=246.215;SAR=0;SRF=616;SRP=1340.64;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:119:95,24:95:3764:24:942:-49.2537,0,-302.961 0/0:121:118,2:118:4700:2:81:0,-28.8457,-415.227 0/1:105:92,13:92:3657:13:521:-15.6266,0,-297.545 0/1:124:81,43:81:3172:43:1739:-119.395,0,-248.241 0/1:111:90,21:90:3553:21:832:-41.7798,0,-286.391 0/0:149:140,9:140:5566:9:365:0,-11.639,-467.544 dDocent_Contig_9532 36 . T A 412.362 . AB=0.234568;ABP=52.5788;AC=2;AF=0.166667;AN=12;AO=21;CIGAR=1X1M1X;DP=244;DPB=244;DPRA=1.15929;EPP=48.6112;EPPR=487.249;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.190476;PAIREDR=0.372197;PAO=0;PQA=0;PQR=0;PRO=0;QA=838;QR=8838;RO=223;RPL=0;RPP=48.6112;RPPR=487.249;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=223;SRP=487.249;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:40:35,5:35:1383:5:192:-5.607,0,-112.69 0|0:50:48,2:48:1876:2:81:0,-7.36577,-161.368 0|1:41:27,14:27:1083:14:565:-38.851,0,-85.4161 0|0:42:42,0:42:1687:0:0:0,-12.6433,-152.053 0|0:26:26,0:26:1013:0:0:0,-7.82678,-91.4677 0|0:45:45,0:45:1796:0:0:0,-13.5463,-161.856 dDocent_Contig_9533 21 . A G 1417.41 . AB=0.25641;ABP=123.611;AC=3;AF=0.25;AN=12;AO=63;CIGAR=1X;DP=427;DPB=427;DPRA=0.804706;EPP=139.813;EPPR=793.426;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2527;QR=14493;RO=364;RPL=0;RPP=139.813;RPPR=793.426;RPR=63;RUN=1;SAF=63;SAP=139.813;SAR=0;SRF=364;SRP=793.426;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:66:57,9:57:2273:9:363:-13.1663,0,-184.864 0/0:47:45,2:45:1782:2:81:0,-6.46268,-152.912 0/0:61:60,1:60:2382:1:41:0,-14.2683,-210.437 0/0:85:85,0:85:3382:0:0:0,-25.5875,-304.437 0/1:66:48,18:48:1919:18:717:-44.9874,0,-153.046 0/1:102:69,33:69:2755:33:1325:-88.8096,0,-217.361 dDocent_Contig_9534 95 . T G 3350.45 . AB=0.473333;ABP=4.86329;AC=6;AF=0.5;AN=12;AO=142;CIGAR=1X;DP=300;DPB=300;DPRA=0;EPP=311.359;EPPR=346.103;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.464789;PAIREDR=0.556962;PAO=0;PQA=0;PQR=0;PRO=0;QA=4830;QR=5449;RO=158;RPL=142;RPP=311.359;RPPR=346.103;RPR=0;RUN=1;SAF=142;SAP=311.359;SAR=0;SRF=158;SRP=346.103;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:43:27,16:27:933:16:557:-37.5147,0,-71.3402 0/1:75:36,39:36:1256:39:1326:-97.0603,0,-90.7681 0/1:49:32,17:32:1114:17:547:-34.7834,0,-85.8196 0/1:51:32,19:32:1071:19:657:-44.1013,0,-81.3374 0/1:38:18,20:18:628:20:666:-48.8118,0,-45.4079 0/1:44:13,31:13:447:31:1077:-83.9956,0,-27.3138 dDocent_Contig_9535 37 . A C 134.42 . AB=0.21875;ABP=24.9965;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=182;DPB=182;DPRA=1.06667;EPP=18.2106;EPPR=383.018;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.977143;PAO=0;PQA=0;PQR=0;PRO=0;QA=266;QR=6786;RO=175;RPL=0;RPP=18.2106;RPPR=383.018;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=175;SRP=383.018;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:25,7:25:972:7:266:-14.6638,0,-78.1476 0/0:20:20,0:20:785:0:0:0,-6.0206,-70.9697 0/0:23:23,0:23:894:0:0:0,-6.92369,-80.7721 0/0:30:30,0:30:1181:0:0:0,-9.0309,-106.573 0/0:36:36,0:36:1418:0:0:0,-10.8371,-127.88 0/0:41:41,0:41:1536:0:0:0,-12.3422,-138.48 dDocent_Contig_9536 8 . C T 87.6762 . AB=0.125;ABP=110.498;AC=3;AF=0.25;AN=12;AO=15;CIGAR=1X;DP=198;DPB=198;DPRA=0;EPP=35.5824;EPPR=400.39;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.8;PAIREDR=0.530055;PAO=0;PQA=0;PQR=0;PRO=0;QA=583;QR=6990;RO=183;RPL=0;RPP=35.5824;RPPR=400.39;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=183;SRP=400.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:33,1:33:1248:1:39:0,-6.33846,-108.714 0/0:37:36,1:36:1377:1:39:0,-7.24155,-120.316 0/1:19:15,4:15:581:4:156:-8.69772,0,-46.9135 0/0:39:37,2:37:1402:2:78:0,-4.3367,-119.052 0/1:37:33,4:33:1268:4:156:-3.27918,0,-103.273 0/1:32:29,3:29:1114:3:115:-1.09193,0,-90.929 dDocent_Contig_9537 15 . T C 216.198 . AB=0.108247;ABP=261.617;AC=5;AF=0.416667;AN=12;AO=23;CIGAR=1X;DP=276;DPB=276;DPRA=1.225;EPP=52.9542;EPPR=552.393;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9526;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0;PAIREDR=0.996047;PAO=0;PQA=0;PQR=0;PRO=0;QA=930;QR=10069;RO=253;RPL=0;RPP=52.9542;RPPR=552.393;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=253;SRP=552.393;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1396:0:0:0,-10.536,-125.842 0/1:115:105,10:105:4178:10:408:-2.46193,0,-341.369 0/0:45:45,0:45:1793:0:0:0,-13.5463,-161.579 0/1:70:61,9:61:2423:9:359:-11.599,0,-197.149 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 0/1:9:7,2:7:279:2:82:-5.07041,0,-22.7719 dDocent_Contig_9538 41 . C T 973.767 . AB=0.402299;ABP=10.2236;AC=1;AF=0.0833333;AN=12;AO=37;CIGAR=1X;DP=543;DPB=543;DPRA=0.694789;EPP=83.3548;EPPR=1101.78;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998024;PAO=0;PQA=0;PQR=0;PRO=0;QA=1469;QR=19921;RO=506;RPL=0;RPP=83.3548;RPPR=1101.78;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=506;SRP=1101.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:59,0:59:2315:0:0:0,-17.7608,-208.516 0/0:53:51,2:51:1971:2:82:0,-8.17491,-169.81 0/0:124:124,0:124:4912:0:0:0,-37.3277,-441.979 0/1:87:52,35:52:2046:35:1387:-98.8996,0,-158.138 0/0:147:147,0:147:5802:0:0:0,-44.2514,-522.008 0/0:73:73,0:73:2875:0:0:0,-21.9752,-258.854 dDocent_Contig_9539 19 . G T 87.8573 . AB=0.137255;ABP=61.2994;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=271;DPB=271;DPRA=1.44144;EPP=33.4109;EPPR=558.907;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.642857;PAIREDR=0.792969;PAO=0;PQA=0;PQR=0;PRO=0;QA=548;QR=10080;RO=256;RPL=0;RPP=33.4109;RPPR=558.907;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=256;SRP=558.907;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:53:49,4:49:1926:4:162:0,-0.987634,-158.561 0/0:36:36,0:36:1408:0:0:0,-10.8371,-126.972 0/0:39:39,0:39:1571:0:0:0,-11.7402,-141.622 0/1:51:44,7:44:1717:7:281:-10.3085,0,-139.404 0/0:36:35,0:35:1385:0:0:0,-10.536,-124.494 0/0:56:53,3:53:2073:3:105:0,-7.06587,-176.964 dDocent_Contig_9540 10 . T A 343.718 . AB=0.272727;ABP=32.6213;AC=3;AF=0.25;AN=12;AO=19;CIGAR=1X;DP=135;DPB=135;DPRA=1.03409;EPP=44.2683;EPPR=254.901;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.736842;PAIREDR=0.836207;PAO=0;PQA=0;PQR=0;PRO=0;QA=686;QR=4671;RO=116;RPL=0;RPP=44.2683;RPPR=254.901;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=116;SRP=254.901;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:17:12,5:12:470:5:183:-11.7092,0,-37.5261 0/1:28:19,9:19:754:9:323:-20.9852,0,-59.7492 0/1:21:17,4:17:693:4:143:-6.89921,0,-56.3764 0/0:25:24,1:24:975:1:37:0,-3.82792,-84.3494 0/0:20:20,0:20:817:0:0:0,-6.0206,-73.8432 0/0:24:24,0:24:962:0:0:0,-7.22472,-86.8784 dDocent_Contig_9541 8 . C T 866.428 . AB=0.200855;ABP=184.894;AC=4;AF=0.333333;AN=12;AO=48;CIGAR=1X;DP=368;DPB=368;DPRA=0.851429;EPP=107.241;EPPR=680.618;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=0.915625;PAO=0;PQA=0;PQR=0;PRO=0;QA=1849;QR=12305;RO=320;RPL=0;RPP=107.241;RPPR=697.881;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=318;SRP=680.618;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:51:42,9:42:1602:9:348:-16.3278,0,-129.086 0/1:71:63,8:63:2428:8:310:-6.89058,0,-197.353 0/1:54:41,13:41:1592:13:495:-28.6391,0,-127.289 0/1:58:41,17:41:1579:17:657:-42.0072,0,-124.916 0/0:70:70,0:70:2688:0:0:0,-21.0721,-242.105 0/0:64:63,1:63:2416:1:39:0,-15.3694,-213.751 dDocent_Contig_9542 19 . A G 492.591 . AB=0.25;ABP=52.9542;AC=3;AF=0.25;AN=12;AO=25;CIGAR=1X;DP=208;DPB=208;DPRA=0.783951;EPP=57.2971;EPPR=400.39;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.830601;PAO=0;PQA=0;PQR=0;PRO=0;QA=981;QR=7239;RO=183;RPL=0;RPP=57.2971;RPPR=400.39;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=183;SRP=400.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:24,8:24:960:8:313:-18.9013,0,-77.0699 0/0:34:34,0:34:1336:0:0:0,-10.235,-120.505 0/1:13:11,2:11:444:2:76:-3.30015,0,-36.4024 0/1:47:34,13:34:1325:13:512:-32.2759,0,-105.368 0/0:35:33,2:33:1309:2:80:0,-2.94426,-110.478 0/0:47:47,0:47:1865:0:0:0,-14.1484,-168.058 dDocent_Contig_9543 24 . A G 64.285 . AB=0.122951;ABP=153.661;AC=3;AF=0.25;AN=12;AO=23;CIGAR=2X;DP=234;DPB=234;DPRA=2.55294;EPP=52.9542;EPPR=461.191;GTI=0;LEN=1;MEANALT=1;MQM=52.6087;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.402844;PAO=0;PQA=0;PQR=0;PRO=0;QA=788;QR=8134;RO=211;RPL=0;RPP=52.9542;RPPR=461.191;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=211;SRP=461.191;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:27:24,3:24:901:3:106:-1.74444,0,-73.2617 0|0:34:31,3:31:1217:3:92:0,-1.70309,-101.284 0|0:17:17,0:17:623:0:0:0,-5.11751,-56.3879 0|1:36:30,6:30:1163:6:205:-7.90493,0,-94.1211 0|0:61:56,5:56:2151:5:179:0,-1.93455,-177.353 0|1:59:53,6:53:2079:6:206:-1.08557,0,-169.553 dDocent_Contig_9544 35 . A C 1467.37 . AB=0.269565;ABP=109.091;AC=5;AF=0.416667;AN=12;AO=64;CIGAR=1X;DP=262;DPB=262;DPRA=0;EPP=141.985;EPPR=432.962;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.609375;PAIREDR=0.787879;PAO=0;PQA=0;PQR=0;PRO=0;QA=2558;QR=7905;RO=198;RPL=0;RPP=141.985;RPPR=432.962;RPR=64;RUN=1;SAF=64;SAP=141.985;SAR=0;SRF=198;SRP=432.962;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:14,10:14:553:10:398:-28.9523,0,-42.8826 0/1:59:43,16:43:1722:16:653:-41.3416,0,-137.441 0/1:56:39,17:39:1565:17:682:-44.8508,0,-124.231 0/1:38:26,12:26:1039:12:480:-32.1115,0,-82.3569 0/0:32:30,2:30:1197:2:75:0,-2.51416,-100.886 0/1:53:46,7:46:1829:7:270:-8.70299,0,-148.864 dDocent_Contig_9545 34 . G A 914.039 . AB=0.299213;ABP=47.4827;AC=3;AF=0.25;AN=12;AO=40;CIGAR=1X;DP=278;DPB=278;DPRA=0.719298;EPP=89.8692;EPPR=519.821;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.55;PAIREDR=0.630252;PAO=0;PQA=0;PQR=0;PRO=0;QA=1566;QR=9566;RO=238;RPL=0;RPP=89.8692;RPPR=519.821;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=238;SRP=519.821;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:16,3:16:644:3:120:-5.46774,0,-52.5715 0/0:51:51,0:51:2049:0:0:0,-15.3525,-184.593 0/0:37:35,2:35:1423:2:79:0,-3.64087,-120.819 0/0:63:63,0:63:2519:0:0:0,-18.9649,-226.846 0/1:53:35,18:35:1422:18:721:-49.2604,0,-112.272 0/1:55:38,17:38:1509:17:646:-41.8976,0,-119.497 dDocent_Contig_9546 24 . A G 414.561 . AB=0.164634;ABP=163.223;AC=3;AF=0.25;AN=12;AO=28;CIGAR=1X;DP=359;DPB=359;DPRA=0.947581;EPP=63.8115;EPPR=721.768;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.951662;PAO=0;PQA=0;PQR=0;PRO=0;QA=1078;QR=12927;RO=331;RPL=0;RPP=63.8115;RPPR=721.768;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=331;SRP=721.768;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:60:51,9:51:1993:9:346:-13.4344,0,-161.524 0/0:71:70,1:70:2722:1:39:0,-17.4766,-241.236 0/1:64:58,6:58:2283:6:216:-0.515875,0,-186.384 0/1:40:28,12:28:1100:12:477:-31.2412,0,-87.2507 0/0:71:71,0:71:2758:0:0:0,-21.3731,-248.378 0/0:53:53,0:53:2071:0:0:0,-15.9546,-186.595 dDocent_Contig_9547 41 . C T 532.112 . AB=0.110774;ABP=870.179;AC=2;AF=0.166667;AN=12;AO=115;CIGAR=1X;DP=1726;DPB=1726;DPRA=0;EPP=252.73;EPPR=3438.54;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997516;PAO=0;PQA=0;PQR=0;PRO=0;QA=4470;QR=63416;RO=1610;RPL=0;RPP=252.73;RPPR=3438.54;RPR=115;RUN=1;SAF=115;SAP=252.73;SAR=0;SRF=1610;SRP=3499.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:198:180,18:180:7115:18:681:-2.00592,0,-580.458 0/0:284:282,2:282:11094:2:50:0,-80.7477,-993.039 0/0:165:159,6:159:6314:6:240:0,-27.6945,-546.043 0/0:330:307,23:307:12030:23:924:0,-15.8745,-998.48 0/0:288:276,11:276:10927:11:431:0,-47.6044,-943.629 0/1:461:406,55:406:15936:55:2144:-54.361,0,-1294.34 dDocent_Contig_9548 91 . A C 149.862 . AB=0.266667;ABP=17.1973;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=577;DPB=577;DPRA=0.821516;EPP=29.068;EPPR=1229.89;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.416667;PAIREDR=0.929204;PAO=0;PQA=0;PQR=0;PRO=0;QA=419;QR=19339;RO=565;RPL=12;RPP=29.068;RPPR=1229.89;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=565;SRP=1229.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:76:76,0:76:2578:0:0:0,-22.8783,-232.276 0/0:147:147,0:147:5019:0:0:0,-44.2514,-451.893 0/0:64:64,0:64:2175:0:0:0,-19.2659,-196.019 0/0:122:122,0:122:4166:0:0:0,-36.7257,-375.145 0/1:30:22,8:22:760:8:280:-16.5091,0,-59.6896 0/0:138:134,4:134:4641:4:139:0,-28.6894,-405.029 dDocent_Contig_9549 9 . A G 61.5365 . AB=0.16129;ABP=33.9012;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=232;DPB=232;DPRA=0.771144;EPP=13.8677;EPPR=495.935;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.991189;PAO=0;PQA=0;PQR=0;PRO=0;QA=185;QR=8670;RO=227;RPL=0;RPP=13.8677;RPPR=495.935;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=227;SRP=495.935;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:880:0:0:0,-6.92369,-79.5173 0/0:55:55,0:55:2095:0:0:0,-16.5566,-188.776 0/0:26:26,0:26:1002:0:0:0,-7.82678,-90.4918 0/0:50:50,0:50:1901:0:0:0,-15.0515,-171.336 0/1:31:26,5:26:997:5:185:-7.67653,0,-80.7095 0/0:47:47,0:47:1795:0:0:0,-14.1484,-161.802 dDocent_Contig_9550 38 . G A 39.2136 . AB=0.15;ABP=24.2907;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=129;DPB=129;DPRA=0.917431;EPP=9.52472;EPPR=276.616;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.81746;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=5054;RO=126;RPL=0;RPP=9.52472;RPPR=276.616;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=126;SRP=276.616;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:647:0:0:0,-4.81648,-58.5637 0/0:25:25,0:25:988:0:0:0,-7.52575,-89.2153 0/1:20:17,3:17:683:3:123:-5.44419,0,-55.7778 0/0:16:16,0:16:652:0:0:0,-4.81648,-59.0125 0/0:27:27,0:27:1089:0:0:0,-8.12781,-98.2964 0/0:25:25,0:25:995:0:0:0,-7.52575,-89.8457 dDocent_Contig_9552 19 . G A 1489.22 . AB=0.414815;ABP=11.5193;AC=5;AF=0.416667;AN=12;AO=56;CIGAR=1X;DP=144;DPB=144;DPRA=3;EPP=124.613;EPPR=194.1;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.678571;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2189;QR=3471;RO=88;RPL=0;RPP=124.613;RPPR=194.1;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=88;SRP=194.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:18,3:18:715:3:120:-4.86606,0,-58.3499 0/1:25:9,16:9:340:16:630:-49.5069,0,-23.4192 0/1:46:21,25:21:835:25:959:-72.7626,0,-61.6168 0/0:9:9,0:9:352:0:0:0,-2.70927,-32.0394 0/1:10:2,8:2:81:8:317:-25.8837,0,-4.67543 0/1:33:29,4:29:1148:4:163:-5.12444,0,-93.6684 dDocent_Contig_9553 96 . G A 1070.89 . AB=0.617647;ABP=11.1853;AC=2;AF=0.166667;AN=12;AO=42;CIGAR=1X;DP=114;DPB=114;DPRA=2.95652;EPP=94.2121;EPPR=159.356;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.6528;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.986111;PAO=0;PQA=0;PQR=0;PRO=0;QA=1446;QR=2441;RO=72;RPL=42;RPP=94.2121;RPPR=159.356;RPR=0;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=72;SRP=159.356;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:8:8,0:8:278:0:0:0,-2.40824,-25.358 0/1:31:12,19:12:413:19:663:-50.664,0,-28.1689 0/0:11:11,0:11:354:0:0:0,-3.31133,-32.1717 0/0:26:26,0:26:885:0:0:0,-7.82678,-79.9617 0/0:1:1,0:1:34:0:0:0,-0.30103,-3.14617 0/1:37:14,23:14:477:23:783:-59.6466,0,-32.118 dDocent_Contig_9554 20 . A G 306.171 . AB=0.233333;ABP=40.0701;AC=1;AF=0.0833333;AN=12;AO=26;CIGAR=1X;DP=496;DPB=496;DPRA=0.847826;EPP=59.4686;EPPR=1023.6;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.846154;PAIREDR=0.951064;PAO=0;PQA=0;PQR=0;PRO=0;QA=1030;QR=18723;RO=470;RPL=0;RPP=59.4686;RPPR=1023.6;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=470;SRP=1023.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:43:41,2:41:1645:2:81:0,-5.25856,-140.593 0/0:89:89,0:89:3561:0:0:0,-26.7917,-320.52 0/0:77:73,4:73:2871:4:161:0,-8.30382,-243.621 0/0:95:95,0:95:3798:0:0:0,-28.5978,-341.824 0/1:60:46,14:46:1842:14:554:-32.14,0,-147.928 0/0:132:126,6:126:5006:6:234:0,-18.3093,-428.994 dDocent_Contig_9555 209 . N G 197.431 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=201;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 1/1:1:0,1:0:0:1:38:-3.79727,-0.30103,0 1/1:3:0,3:0:0:3:122:-11.3725,-0.90309,0 dDocent_Contig_9556 127 . C T 137.379 . AB=0.118644;ABP=375.657;AC=1;AF=0.0833333;AN=12;AO=108;CIGAR=1X;DP=1678;DPB=1678;DPRA=1.07605;EPP=237.529;EPPR=3410.05;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=59.7228;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3631;QR=53712;RO=1569;RPL=0;RPP=237.529;RPPR=3410.05;RPR=108;RUN=1;SAF=0;SAP=237.529;SAR=108;SRF=0;SRP=3410.05;SRR=1569;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:263:263,0:263:9097:0:0:0,-79.1709,-818.555 0/1:295:260,35:260:8932:35:1153:-15.2608,0,-714.988 0/0:237:216,20:216:7447:20:690:0,-8.77989,-607.721 0/0:290:280,10:280:9664:10:335:0,-56.8242,-839.275 0/0:278:263,15:263:8938:15:521:0,-36.4666,-757.246 0/0:315:287,28:287:9634:28:932:0,-10.6411,-782.841 dDocent_Contig_9557 8 . C T 94.0001 . AB=0.176471;ABP=33.9218;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=228;DPB=228;DPRA=1.18881;EPP=18.2106;EPPR=480.734;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.759091;PAO=0;PQA=0;PQR=0;PRO=0;QA=264;QR=8478;RO=220;RPL=0;RPP=18.2106;RPPR=480.734;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=220;SRP=480.734;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:616:0:0:0,-4.81648,-55.7792 0/0:37:36,0:36:1381:0:0:0,-10.8371,-124.455 0/1:34:28,6:28:1088:6:231:-10.9229,0,-87.989 0/0:46:46,0:46:1774:0:0:0,-13.8474,-159.914 0/0:44:44,0:44:1705:0:0:0,-13.2453,-153.703 0/0:51:50,1:50:1914:1:33:0,-12.0534,-169.206 dDocent_Contig_9558 12 . G A 3535.11 . AB=0.196487;ABP=731.941;AC=6;AF=0.5;AN=12;AO=179;CIGAR=1M1I1M1X;DP=911;DPB=970.667;DPRA=0;EPP=391.704;EPPR=1592.53;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990437;PAO=0;PQA=0;PQR=0;PRO=0;QA=7081;QR=28687;RO=732;RPL=0;RPP=391.704;RPPR=1592.53;RPR=179;RUN=1;SAF=179;SAP=391.704;SAR=0;SRF=732;SRP=1592.53;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:102:83,19:83:3226:19:744:-36.5735,0,-259.737 0|1:224:198,26:198:7738:26:1025:-25.1162,0,-628.688 0|1:114:84,30:84:3304:30:1187:-72.795,0,-263.132 0|1:217:156,61:156:6154:61:2449:-155.237,0,-488.354 0|1:130:108,22:108:4236:22:853:-37.9527,0,-342.118 0|1:124:103,21:103:4029:21:823:-37.058,0,-325.313 dDocent_Contig_9559 35 . T A 295.552 . AB=0.473684;ABP=3.35316;AC=3;AF=0.25;AN=12;AO=27;CIGAR=1M10D1X1M1X1M2I2M;DP=83;DPB=69.8235;DPRA=2.19231;EPP=61.6401;EPPR=120.27;GTI=0;LEN=1;MEANALT=1.33333;MQM=23.7778;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=642;QR=2077;RO=54;RPL=0;RPP=61.6401;RPPR=120.27;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=54;SRP=120.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:12:12,0:12:437:0:0:0,-3.61236,-39.6628 0|0:8:7,0:7:270:0:0:0,-2.10721,-24.537 0|0:6:6,0:6:228:0:0:0,-1.80618,-20.8833 0|1:20:13,7:13:516:7:168:-7.41835,0,-40.7673 0|1:28:15,13:15:586:13:306:-15.807,0,-44.6516 0|1:9:1,7:1:40:7:168:-10.8207,0,-1.28266 dDocent_Contig_9560 8 . C T 216.882 . AB=0.152381;ABP=113.218;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1M1X1M;DP=329;DPB=331;DPRA=1.12871;EPP=17.2236;EPPR=665.309;GTI=0;LEN=1;MEANALT=1;MQM=54.8182;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.0454545;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=832;QR=11599;RO=305;RPL=0;RPP=50.7827;RPPR=665.309;RPR=22;RUN=1;SAF=17;SAP=17.2236;SAR=5;SRF=305;SRP=665.309;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:56:53,0,3:53:2017:0,3:0,95:0,-15.9546,-181.454,-8.01627,-173.835,-172.932 0|1:47:40,0,7:40:1519:0,7:0,271:-10.5677,-22.6089,-147.17,0,-124.946,-122.839 0|0:67:64,0,3:64:2434:0,3:0,116:0,-19.2659,-218.89,-9.4272,-209.435,-208.532 0|1:58:49,0,9:49:1865:0,9:0,350:-14.3424,-29.0929,-182.057,0,-153.351,-150.641 0|0:35:33,2,0:33:1260:2,0:72,0:0,-3.69941,-106.858,-9.93399,-107.46,-113.333 0|0:66:66,0,0:66:2504:0,0:0,0:0,-19.868,-225.571,-19.868,-225.571,-225.571 dDocent_Contig_9561 98 . N T 135.042 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=139;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:104:-9.70309,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_9562 14 . G T 59.0541 . AB=0.0988372;ABP=243.438;AC=4;AF=0.333333;AN=12;AO=18;CIGAR=1X;DP=236;DPB=236;DPRA=0.872727;EPP=42.0968;EPPR=476.391;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.611111;PAIREDR=0.53211;PAO=0;PQA=0;PQR=0;PRO=0;QA=724;QR=8618;RO=218;RPL=0;RPP=42.0968;RPPR=476.391;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=218;SRP=476.391;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:19,1:19:736:1:39:0,-2.12404,-62.6629 0/1:47:42,5:42:1655:5:199:-4.13903,0,-135.03 0/1:34:30,4:30:1200:4:164:-4.91488,0,-98.0406 0/1:55:50,5:50:1973:5:202:-2.00522,0,-161.199 0/1:36:33,3:33:1320:3:120:-0.35061,0,-108.223 0/0:44:44,0:44:1734:0:0:0,-13.2453,-156.284 dDocent_Contig_9563 92 . T A 1309.1 . AB=0.777778;ABP=45.2334;AC=1;AF=0.0833333;AN=12;AO=49;CIGAR=1X;DP=959;DPB=959;DPRA=0.351562;EPP=109.412;EPPR=1979.05;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1679;QR=31498;RO=910;RPL=49;RPP=109.412;RPPR=1979.05;RPR=0;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=910;SRP=1979.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:290:290,0:290:10000:0:0:0,-87.2987,-900.013 0/0:162:162,0:162:5619:0:0:0,-48.7669,-505.866 0/0:148:148,0:148:5144:0:0:0,-44.5524,-463.132 0/0:235:235,0:235:8128:0:0:0,-70.742,-731.591 0/0:61:61,0:61:2124:0:0:0,-18.3628,-191.436 0/1:63:14,49:14:483:49:1679:-132.433,0,-24.8342 dDocent_Contig_9564 21 . C T 558.25 . AB=0.127352;ABP=836.482;AC=1;AF=0.0833333;AN=12;AO=406;CIGAR=1X;DP=4873;DPB=4873;DPRA=0;EPP=884.628;EPPR=9659.58;GTI=0;LEN=1;MEANALT=1.5;MQM=36.936;MQMR=29.1526;NS=6;NUMALT=1;ODDS=0;PAIRED=0.29064;PAIREDR=0.0757338;PAO=0;PQA=0;PQR=0;PRO=0;QA=15657;QR=172999;RO=4463;RPL=0;RPP=884.628;RPPR=9694.29;RPR=406;RUN=1;SAF=406;SAP=884.628;SAR=0;SRF=4459;SRP=9659.58;SRR=4;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:692:641,51:641:24811:51:1964:0,-92.187,-1325.64 0/0:949:855,92:855:33142:92:3527:0,-62.8633,-1812.06 0/0:603:572,29:572:22258:29:1122:0,-114.073,-1200.7 0/0:936:864,72:864:33526:72:2778:0,-88.9388,-1759.14 0/1:691:603,88:603:23309:88:3362:-57.3479,0,-1244.6 0/0:1002:928,74:928:35953:74:2904:0,-77.3025,-1970.71 dDocent_Contig_9565 15 . A C 3299.77 . AB=0.383871;ABP=39.3229;AC=6;AF=0.5;AN=12;AO=119;CIGAR=1X4M;DP=310;DPB=310;DPRA=0;EPP=261.416;EPPR=393.875;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.470588;PAIREDR=0.45;PAO=0;PQA=0;PQR=0;PRO=0;QA=4779;QR=7116;RO=180;RPL=0;RPP=261.416;RPPR=393.875;RPR=119;RUN=1;SAF=119;SAP=261.416;SAR=0;SRF=180;SRP=393.875;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:61:50,0,11:50:1958:0,11:0,448:-22.3126,-37.3641,-198.34,0,-161.38,-158.069 0|1:65:37,3,25:37:1465:3,25:120,978:-69.2493,-70.5015,-190.178,0,-110.688,-113.048 0|1:54:25,8,21:25:989:8,21:318,853:-62.8336,-44.1807,-123.16,0,-55.2108,-75.0707 0|1:59:30,0,29:30:1200:0,29:0,1172:-87.996,-97.0269,-195.875,0,-99.2502,-90.5203 0|1:35:13,0,22:13:516:0,22:0,883:-69.2392,-73.1526,-115.629,0,-42.8743,-36.2516 0|1:36:25,0,11:25:988:0,11:0,445:-29.5686,-37.0944,-118.392,0,-81.699,-78.3876 dDocent_Contig_9566 7 . A G 53.9106 . AB=0.118881;ABP=183.425;AC=1;AF=0.0833333;AN=12;AO=52;CIGAR=1X;DP=1183;DPB=1183;DPRA=0;EPP=115.927;EPPR=2456.77;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.1923;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.826549;PAO=0;PQA=0;PQR=0;PRO=0;QA=1693;QR=43011;RO=1130;RPL=0;RPP=115.927;RPPR=2456.77;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=1130;SRP=2456.77;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:161:157,4:157:5984:4:141:0,-35.4299,-525.483 0/0:276:269,7:269:10210:7:253:0,-60.0207,-895.495 0/0:197:190,7:190:7261:7:206:0,-40.4791,-634.533 0/0:242:233,9:233:8939:9:295:0,-45.9876,-777.384 0/1:143:125,17:125:4725:17:550:-6.91394,0,-382.447 0/0:164:156,8:156:5892:8:248:0,-26.7502,-507.635 dDocent_Contig_9567 15 . A C 3795.95 . AB=0.456446;ABP=7.73912;AC=6;AF=0.5;AN=12;AO=131;CIGAR=1X;DP=287;DPB=287;DPRA=0;EPP=287.473;EPPR=341.76;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.885496;PAIREDR=0.987179;PAO=0;PQA=0;PQR=0;PRO=0;QA=5282;QR=6277;RO=156;RPL=0;RPP=287.473;RPPR=341.76;RPR=131;RUN=1;SAF=131;SAP=287.473;SAR=0;SRF=156;SRP=341.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:55:22,33:22:876:33:1310:-101.595,0,-62.5918 0/1:32:10,22:10:403:22:883:-70.1437,0,-26.9969 0/1:36:11,25:11:446:25:1018:-81.0742,0,-29.6585 0/1:46:19,27:19:764:27:1098:-85.2544,0,-55.2327 0/1:49:43,6:43:1733:6:242:-7.40648,0,-141.436 0/1:69:51,18:51:2055:18:731:-45.343,0,-164.361 dDocent_Contig_9568 18 . G A 83786.7 . AB=0.0590909;ABP=7432.6;AC=0;AF=0;AN=12;AO=260;CIGAR=1X1M1X2M;DP=4400;DPB=4400;DPRA=0;EPP=567.593;EPPR=1746.7;GTI=0;LEN=1;MEANALT=10;MQM=56.3308;MQMR=59.6438;NS=6;NUMALT=4;ODDS=0;PAIRED=0.280769;PAIREDR=0.216687;PAO=0;PQA=0;PQR=0;PRO=0;QA=10314;QR=31255;RO=803;RPL=0;RPP=567.593;RPPR=1746.7;RPR=260;RUN=1;SAF=260;SAP=567.593;SAR=0;SRF=803;SRP=1746.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:622:118,41,58,307,61:118:4566:41,58,307,61:1600,2284,12210,2415:-968.453,-874.249,-1236.48,-816.089,-1060.93,-1173.2,0,-244.844,-186.683,-282.154,-805.232,-1050.08,-991.916,-175.825,-1161.44 0|0:897:187,38,55,514,81:187:7298:38,55,514,81:1503,2166,20597,3265:-1640.52,-1573.38,-2160.97,-1518.63,-1994.23,-2101.11,0,-475.599,-420.856,-444.307,-1427.69,-1903.29,-1848.55,-329.915,-2002.35 0|0:522:98,27,25,302,54:98:3840:27,25,302,54:1071,990,12071,2133:-964.616,-907.321,-1214.64,-912.635,-1141.29,-1220.56,0,-228.651,-233.965,-224.536,-818.75,-1047.4,-1052.71,-140.079,-1117.94 0|0:941:173,67,78,543,44:173:6723:67,78,543,44:2674,3118,21753,1749:-1739.68,-1574.44,-2105.41,-1534.92,-1868.75,-2062.58,0,-333.821,-294.301,-387.675,-1647.81,-1981.63,-1942.11,-407.185,-2185.7 0|0:548:84,41,0,365,33:84:3273:41,0,365,33:1627,0,14664,1335:-1181.41,-1073.62,-1329.83,-1206.69,-1342.17,-1475.25,0,-135.474,-268.552,-158.676,-1096.7,-1232.17,-1365.25,-158.552,-1355.31 0|0:870:143,46,9,588,42:143:5555:46,9,588,42:1839,360,23541,1658:-1895.21,-1787.29,-2229.74,-1908.61,-2213.93,-2362.2,0,-305.323,-426.644,-279.293,-1802.02,-2107.34,-2228.66,-320.053,-2245.67 dDocent_Contig_9569 17 . G A 16897 . AB=0.0339147;ABP=1950.27;AC=2;AF=0.166667;AN=12;AO=35;CIGAR=5M1X;DP=1471;DPB=1471;DPRA=0;EPP=79.0118;EPPR=1095.26;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=6;ODDS=2.22045e-16;PAIRED=1;PAIREDR=0.994036;PAO=0;PQA=0;PQR=0;PRO=0;QA=1386;QR=19734;RO=503;RPL=0;RPP=79.0118;RPPR=1095.26;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=503;SRP=1095.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:77:31,0,0,0,29,7,10:31:1230:0,0,0,29,7,10:0,0,0,1156,283,398:-85.8567,-95.1887,-196.44,-95.1887,-196.44,-196.44,-95.1887,-196.44,-196.44,-196.44,0,-101.25,-101.25,-101.25,-92.52,-71.8558,-173.107,-173.107,-173.107,-77.9169,-171,-62.4194,-163.67,-163.67,-163.67,-68.4803,-140.338,-160.66 0|0:126:58,0,0,11,51,3,3:58:2272:0,0,11,51,3,3:0,0,441,2016,122,117:-148.42,-165.879,-352.687,-165.879,-352.687,-352.687,-129.544,-316.352,-316.352,-313.041,0,-186.804,-186.804,-150.468,-171.451,-155.816,-342.624,-342.624,-306.288,-176.74,-341.721,-156.263,-343.071,-343.071,-306.735,-177.187,-333.007,-342.168 0|0:157:102,0,0,12,42,0,1:102:3984:0,0,12,42,0,1:0,0,485,1668,0,41:-106.596,-137.301,-464.799,-137.301,-464.799,-464.799,-97.3136,-424.812,-424.812,-421.2,0,-327.491,-327.491,-287.504,-314.848,-137.301,-464.799,-464.799,-424.812,-327.491,-464.799,-133.917,-461.415,-461.415,-421.428,-324.107,-461.415,-461.114 0|0:177:82,0,1,0,80,4,9:82:3216:0,1,0,80,4,9:0,33,0,3165,157,345:-235.773,-260.457,-524.921,-257.79,-522.253,-521.952,-260.457,-524.921,-522.253,-524.921,0,-264.472,-261.804,-264.472,-240.389,-247.547,-512.011,-509.343,-512.011,-251.562,-510.806,-232.149,-496.612,-493.944,-496.612,-236.163,-483.702,-493.903 0|1:439:133,0,25,165,106,7,0:133:5194:0,25,165,106,7,0:0,985,6549,4227,285,0:-499.06,-539.097,-966.045,-458.065,-885.013,-877.487,0,-426.947,-345.914,-377.277,-191.012,-617.959,-536.926,-78.8588,-586.05,-515.587,-942.535,-861.502,-403.436,-594.448,-940.427,-539.097,-966.045,-885.013,-426.947,-617.959,-942.535,-966.045 1|0:495:97,89,0,143,153,0,12:97:3838:89,0,143,153,0,12:3525,0,5697,6087,0,485:-625.212,-364.296,-653.362,-654.412,-680.154,-970.27,-185.301,-211.043,-501.159,-458.112,-153.254,-178.995,-469.111,0,-423.054,-654.412,-680.154,-970.27,-501.159,-469.111,-970.27,-614.427,-640.168,-930.284,-461.173,-429.126,-930.284,-926.672 dDocent_Contig_9570 46 . C G 1655.27 . AB=0.139013;ABP=1012.64;AC=3;AF=0.25;AN=12;AO=140;CIGAR=1X;DP=1829;DPB=1829;DPRA=1.08803;EPP=307.016;EPPR=3668.46;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5482;QR=65534;RO=1688;RPL=0;RPP=307.016;RPPR=3668.46;RPR=140;RUN=1;SAF=140;SAP=307.016;SAR=0;SRF=1688;SRP=3668.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:246:212,34:212:8242:34:1334:-46.2707,0,-667.382 0/0:310:304,6:304:11883:6:220:0,-73.1718,-1048.63 0/0:343:333,10:333:12907:10:389:0,-67.8884,-1125.52 0/1:340:303,37:303:11770:37:1432:-26.7773,0,-956.289 0/0:284:283,0:283:10919:0:0:0,-85.1915,-982.067 0/1:306:253,53:253:9813:53:2107:-97.701,0,-790.599 dDocent_Contig_9571 68 . T C 80.1848 . AB=0.363636;ABP=4.78696;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=99;DPB=99;DPRA=1.60526;EPP=16.0391;EPPR=204.957;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.333333;PAIREDR=0.924731;PAO=0;PQA=0;PQR=0;PRO=0;QA=210;QR=3187;RO=93;RPL=6;RPP=16.0391;RPPR=204.957;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=93;SRP=204.957;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:13:13,0:13:443:0:0:0,-3.91339,-40.1962 0/0:16:16,0:16:546:0:0:0,-4.81648,-49.4637 0/0:9:9,0:9:314:0:0:0,-2.70927,-28.5979 0/0:20:19,1:19:657:1:35:0,-2.52197,-55.955 0/1:11:7,4:7:230:4:139:-9.54136,0,-17.7106 0/0:30:29,1:29:997:1:36:0,-5.43262,-86.4426 dDocent_Contig_9572 26 . G C 131.756 . AB=0.130435;ABP=139.435;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1M2D2X;DP=246;DPB=240;DPRA=1.75573;EPP=35.5824;EPPR=502.449;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=560;QR=9094;RO=230;RPL=0;RPP=35.5824;RPPR=502.449;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=230;SRP=502.449;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:67:67,0:67:2663:0:0:0,-20.169,-239.813 0|0:13:13,0:13:518:0:0:0,-3.91339,-46.9684 0|1:24:20,3:20:798:3:109:-2.84618,0,-64.8087 0|1:91:79,12:79:3121:12:451:-13.5411,0,-253.598 0|0:37:37,0:37:1436:0:0:0,-11.1381,-129.501 0|0:14:14,0:14:558:0:0:0,-4.21442,-50.563 dDocent_Contig_9573 20 . C T 336.966 . AB=0.0769231;ABP=23.2217;AC=0;AF=0;AN=12;AO=5;CIGAR=2X1M;DP=240;DPB=240;DPRA=0.806818;EPP=13.8677;EPPR=437.305;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=203;QR=7807;RO=200;RPL=0;RPP=13.8677;RPPR=437.305;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=200;SRP=437.305;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:35:24,2,0,9:24:925:2,0,9:82,0,359:-22.3774,-25.0772,-100.411,-29.6021,-101.013,-105.552,0,-71.4986,-76.0363,-73.327 0|0:58:51,0,4,1:51:1954:0,4,1:0,163,41:0,-15.3525,-175.668,-1.90018,-162.219,-161.015,-12.0958,-172.41,-158.961,-172.109 0|0:44:41,0,0,3:41:1634:0,0,3:0,0,121:0,-12.3422,-146.903,-12.3422,-146.903,-146.903,-2.28637,-137.239,-137.239,-136.336 0|0:76:63,3,0,10:63:2474:3,0,10:122,0,375:-10.6665,-20.967,-223.548,-29.6314,-224.451,-233.116,0,-194.83,-203.494,-200.484 0|0:13:9,0,1,3:9:356:0,1,3:0,40,109:-5.33525,-8.04452,-37.3725,-4.73286,-34.0759,-33.7749,0,-29.2926,-25.9971,-28.3895 0|0:14:12,0,0,2:12:464:0,0,2:0,0,76:-2.51786,-6.13022,-44.2644,-6.13022,-44.2644,-44.2644,0,-38.4931,-38.4931,-37.891 dDocent_Contig_9574 98 . N C 107749 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=3574;CIGAR=1X;DP=3657;DPB=3657;DPRA=0;EPP=7763.85;EPPR=0;GTI=0;LEN=1;MEANALT=3.16667;MQM=55.1114;MQMR=0;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.817851;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=123238;QR=0;RO=0;RPL=3574;RPP=7763.85;RPPR=0;RPR=0;RUN=1;SAF=3574;SAP=7763.85;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:508:0,499:0:0:499:17162:-1489.28,-150.214,0 1/1:654:0,649:0:0:649:22311:-1943.35,-195.368,0 1/1:590:0,586:0:0:586:20092:-1755.62,-176.404,0 1/1:638:0,609:0:0:609:21063:-1838.83,-183.327,0 1/1:652:0,631:0:0:631:21898:-1927.73,-189.95,0 1/1:615:0,600:0:0:600:20712:-1819.28,-180.618,0 dDocent_Contig_9575 15 . C A 14989.4 . AB=0.0375313;ABP=2230.41;AC=0;AF=0;AN=12;AO=45;CIGAR=1X4M;DP=3757;DPB=3756.8;DPRA=0;EPP=100.727;EPPR=5475.12;GTI=0;LEN=1;MEANALT=10;MQM=60;MQMR=56.8813;NS=6;NUMALT=3;ODDS=0;PAIRED=0.844444;PAIREDR=0.596032;PAO=0;PQA=0;PQR=0;PRO=0;QA=1777;QR=98858;RO=2520;RPL=0;RPP=100.727;RPPR=5475.12;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=2520;SRP=5475.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:572:391,35,0,122:391:15279:35,0,122:1372,0,4821:-214.129,-280.848,-1511.03,-331.831,-1521.57,-1572.57,0,-1189.8,-1240.8,-1204.07 0|0:730:470,54,0,177:470:18480:54,0,177:2124,0,6953:-347.961,-413.895,-1891.79,-489.445,-1908.05,-1983.61,0,-1418.68,-1494.25,-1440.96 0|0:571:377,27,0,142:377:14758:27,0,142:1049,0,5611:-275.119,-349.435,-1534.54,-388.608,-1542.67,-1581.86,0,-1154.13,-1193.31,-1150.56 0|0:685:493,38,0,124:493:19330:38,0,124:1470,0,4866:-188.195,-283.999,-1845.8,-336.602,-1857.24,-1909.86,0,-1520.69,-1573.31,-1535.98 0|0:673:445,24,13,159:445:17525:24,13,159:952,522,6217:-298.283,-404.892,-1818.75,-389.223,-1782.96,-1806.41,0,-1393.78,-1378.12,-1373.27 0|0:526:344,22,32,104:344:13486:22,32,104:841,1255,4088:-186.473,-264.441,-1346.06,-186.819,-1249.49,-1265.45,0,-1062.69,-985.088,-1056.98 dDocent_Contig_9576 7 . A T 45840.2 . AB=0.0322028;ABP=5551.36;AC=0;AF=0;AN=12;AO=94;CIGAR=1X1M1X5M1X;DP=2919;DPB=2918.67;DPRA=0;EPP=207.129;EPPR=391.704;GTI=0;LEN=1;MEANALT=20.5;MQM=40.7872;MQMR=60;NS=6;NUMALT=6;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3547;QR=6921;RO=179;RPL=0;RPP=207.129;RPPR=391.704;RPR=94;RUN=1;SAF=94;SAP=207.129;SAR=0;SRF=179;SRP=391.704;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:431:21,10,25,4,16,198,116:21:804:10,25,4,16,198,116:378,974,92,301,7182,3715:-775.548,-752.801,-815.773,-707.736,-744.65,-766.193,-775.65,-812.564,-767.499,-840.428,-763.622,-800.535,-755.471,-823.385,-824.787,-215.778,-252.695,-207.627,-275.546,-263.521,-222.161,-500.108,-537.022,-491.957,-559.872,-547.845,0,-531.171 0|0:516:34,27,16,7,18,250,114:34:1300:27,16,7,18,250,114:1025,630,154,381,8832,3411:-831.062,-761.973,-860.517,-793.125,-820.472,-894.98,-831.434,-858.781,-889.934,-935.998,-816.192,-843.539,-874.691,-913,-917.444,-149.164,-176.514,-207.668,-245.98,-230.74,-180.585,-585.45,-612.798,-643.95,-682.259,-667.018,0,-657.804 0|0:479:39,18,4,10,36,179,162:39:1514:18,4,10,36,179,162:681,157,220,705,6419,5020:-743.924,-703.263,-822.25,-743.699,-815.703,-866.901,-741.574,-813.578,-854.014,-862.969,-712.198,-784.201,-824.637,-822.513,-825.765,-251.244,-323.253,-363.691,-361.567,-332.195,-321.772,-380.016,-452.022,-492.459,-490.335,-460.965,0,-455.657 0|0:527:27,11,20,7,23,234,167:27:1045:11,20,7,23,234,167:425,778,154,383,7971,4950:-891.245,-866.727,-949.257,-840.112,-893.308,-919.933,-889.509,-942.705,-916.09,-973.244,-877.666,-930.862,-904.247,-953.644,-956.584,-279.983,-333.182,-306.565,-355.967,-344.128,-295.388,-533.54,-586.736,-560.121,-609.52,-597.68,0,-569.11 0|0:524:38,8,0,28,30,173,202:38:1478:8,0,28,30,173,202:289,0,616,677,5784,6103:-765.903,-755.005,-874.065,-777.343,-876.474,-898.811,-737.889,-837.02,-859.357,-850.928,-731.679,-830.81,-853.147,-813.694,-844.116,-331.483,-430.619,-452.957,-413.505,-407.295,-400.879,-324.385,-423.52,-445.857,-406.408,-400.198,0,-385.049 0|0:442:20,20,2,26,31,135,142:20:780:20,2,26,31,135,142:749,79,566,786,4393,4326:-587.561,-535.106,-593.206,-587.572,-593.218,-651.091,-557.483,-563.129,-615.595,-613.777,-538.14,-543.786,-596.252,-566.164,-592.929,-257.794,-263.44,-315.908,-285.822,-266.478,-281.278,-271.663,-277.309,-329.776,-299.691,-280.348,0,-293.039 dDocent_Contig_9577 35 . A G 200.164 . AB=0.150538;ABP=101.661;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=206;DPB=206;DPRA=1.45238;EPP=35.5824;EPPR=415.59;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.910526;PAO=0;PQA=0;PQR=0;PRO=0;QA=601;QR=7526;RO=190;RPL=0;RPP=35.5824;RPPR=415.59;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=190;SRP=415.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:25,6:25:1000:6:241:-12.7344,0,-80.9652 0/1:62:54,8:54:2134:8:320:-10.5038,0,-173.578 0/0:29:28,1:28:1101:1:40:0,-4.73419,-95.3796 0/0:60:60,0:60:2366:0:0:0,-18.0618,-213.103 0/0:5:5,0:5:201:0:0:0,-1.50515,-18.4709 0/0:19:18,0:18:724:0:0:0,-5.41854,-65.0748 dDocent_Contig_9578 70 . T G 32.2684 . AB=0.166667;ABP=20.3821;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=148;DPB=148;DPRA=0.692308;EPP=9.52472;EPPR=317.874;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.710345;PAO=0;PQA=0;PQR=0;PRO=0;QA=109;QR=5513;RO=145;RPL=3;RPP=9.52472;RPPR=317.874;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=145;SRP=317.874;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:650:0:0:0,-5.11751,-58.834 0/1:18:15,3:15:567:3:109:-4.74946,0,-45.9505 0/0:19:19,0:19:704:0:0:0,-5.71957,-63.6851 0/0:32:32,0:32:1235:0:0:0,-9.63296,-111.442 0/0:25:25,0:25:928:0:0:0,-7.52575,-83.8283 0/0:37:37,0:37:1429:0:0:0,-11.1381,-128.887 dDocent_Contig_9579 65 . C G 932.582 . AB=0.180505;ABP=248.606;AC=2;AF=0.166667;AN=12;AO=57;CIGAR=1X;DP=607;DPB=607;DPRA=1.08901;EPP=126.784;EPPR=1197.32;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998182;PAO=0;PQA=0;PQR=0;PRO=0;QA=2248;QR=21846;RO=550;RPL=57;RPP=126.784;RPPR=1197.32;RPR=0;RUN=1;SAF=57;SAP=126.784;SAR=0;SRF=550;SRP=1197.32;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:146:126,20:126:4985:20:794:-27.8248,0,-404.61 0/0:114:109,5:109:4346:5:178:0,-17.9532,-374.724 0/0:25:23,2:23:926:2:78:0,-0.122973,-76.2377 0/1:131:101,30:101:4039:30:1198:-68.6547,0,-324.049 0/0:101:101,0:101:3998:0:0:0,-30.404,-359.804 0/0:90:90,0:90:3552:0:0:0,-27.0927,-319.708 dDocent_Contig_9580 20 . G A 781.276 . AB=0.65;ABP=10.8276;AC=2;AF=0.166667;AN=12;AO=26;CIGAR=1X;DP=97;DPB=97;DPRA=1.40351;EPP=59.4686;EPPR=157.185;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.957746;PAO=0;PQA=0;PQR=0;PRO=0;QA=1030;QR=2837;RO=71;RPL=0;RPP=59.4686;RPPR=157.185;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=71;SRP=157.185;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:562:0:0:0,-4.21442,-50.9223 0/0:10:10,0:10:404:0:0:0,-3.0103,-36.7198 0/0:20:20,0:20:803:0:0:0,-6.0206,-72.5855 0/0:13:13,0:13:509:0:0:0,-3.91339,-46.1557 0/1:12:2,10:2:81:10:400:-32.7461,0,-4.07337 0/1:28:12,16:12:478:16:630:-48.6028,0,-34.9415 dDocent_Contig_9581 8 . C G 84.0096 . AB=0.1;ABP=406.036;AC=2;AF=0.166667;AN=12;AO=53;CIGAR=2X;DP=765;DPB=765;DPRA=0;EPP=118.098;EPPR=1546.93;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.985935;PAO=0;PQA=0;PQR=0;PRO=0;QA=2013;QR=27211;RO=711;RPL=0;RPP=118.098;RPPR=1546.93;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=711;SRP=1546.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:62:56,6:56:2136:6:227:-2.12889,0,-173.81 0|0:68:63,5:63:2413:5:187:0,-3.27706,-200.189 0|0:136:134,2:134:5150:2:77:0,-33.6309,-456.202 0|0:107:104,3:104:3985:3:116:0,-21.3925,-347.927 0|0:164:150,14:150:5745:14:541:0,-0.33361,-467.991 0|1:228:204,23:204:7782:23:865:-9.44291,0,-631.495 dDocent_Contig_9582 25 . A G 158.866 . AB=0.139785;ABP=107.825;AC=2;AF=0.166667;AN=12;AO=18;CIGAR=1X;DP=293;DPB=293;DPRA=1.8629;EPP=42.0968;EPPR=597.994;GTI=0;LEN=1;MEANALT=1.25;MQM=57.3333;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.777778;PAIREDR=0.474453;PAO=0;PQA=0;PQR=0;PRO=0;QA=718;QR=10788;RO=274;RPL=0;RPP=42.0968;RPPR=597.994;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=274;SRP=597.994;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1122:0:0:0,-8.42884,-101.265 0/1:55:48,7:48:1875:7:285:-9.39665,0,-152.407 0/0:34:34,0:34:1346:0:0:0,-10.235,-121.403 0/1:38:32,6:32:1217:6:231:-9.71178,0,-98.3642 0/0:51:49,1:49:1939:1:39:0,-11.4167,-170.975 0/0:87:83,4:83:3289:4:163:0,-11.1825,-281.075 dDocent_Contig_9583 8 . C A 306.519 . AB=0.325;ABP=13.6505;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=102;DPB=102;DPRA=1.29032;EPP=31.2394;EPPR=196.271;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=502;QR=3429;RO=89;RPL=0;RPP=31.2394;RPPR=196.271;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=89;SRP=196.271;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:5:5,0:5:189:0:0:0,-1.50515,-17.3746 0/1:19:13,6:13:502:6:234:-15.7115,0,-39.809 0/1:21:14,7:14:544:7:268:-18.1622,0,-42.9846 0/0:12:12,0:12:455:0:0:0,-3.61236,-41.2977 0/0:10:10,0:10:385:0:0:0,-3.0103,-35.0063 0/0:35:35,0:35:1354:0:0:0,-10.536,-122.144 dDocent_Contig_9584 87 . A G 92.029 . AB=0.133333;ABP=160.659;AC=3;AF=0.25;AN=12;AO=25;CIGAR=1X;DP=275;DPB=275;DPRA=0;EPP=10.0459;EPPR=545.878;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.16;PAIREDR=0.372;PAO=0;PQA=0;PQR=0;PRO=0;QA=830;QR=8337;RO=250;RPL=20;RPP=22.5536;RPPR=545.878;RPR=5;RUN=1;SAF=13;SAP=3.09716;SAR=12;SRF=250;SRP=545.878;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:30,7:30:1027:7:226:-9.51962,0,-81.6019 0/0:53:49,4:49:1631:4:130:0,-3.93261,-135.054 0/1:36:32,4:32:1070:4:139:-2.01561,0,-85.7652 0/1:62:55,7:55:1835:7:235:-2.81533,0,-146.766 0/0:41:39,2:39:1297:2:65:0,-6.16878,-110.851 0/0:46:45,1:45:1477:1:35:0,-10.3487,-129.716 dDocent_Contig_9585 14 . A G 998.759 . AB=0.1;ABP=72.4974;AC=0;AF=0;AN=12;AO=5;CIGAR=1M1D1M1X3M;DP=173;DPB=159.429;DPRA=2.38095;EPP=13.8677;EPPR=270.101;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.780488;PAO=0;PQA=0;PQR=0;PRO=0;QA=200;QR=4872;RO=123;RPL=0;RPP=13.8677;RPPR=270.101;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=123;SRP=270.101;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:20:20,0,0:20:802:0,0:0,0:0,-6.0206,-72.4997,-6.0206,-72.4997,-72.4997 0|0:20:8,0,12:8:316:0,12:0,431:-31.4722,-33.8805,-59.9044,0,-26.3983,-22.7859 0|0:26:16,0,10:16:637:0,10:0,391:-27.7159,-32.5324,-84.9897,0,-52.8506,-49.8403 0|0:50:33,5,12:33:1299:5,12:200,465:-28.2573,-21.7124,-127.066,0,-90.3729,-103.237 0|0:35:25,0,10:25:989:0,10:0,344:-19.6523,-27.178,-108.616,0,-81.7882,-78.7779 0|0:22:21,0,1:21:829:0,1:0,39:0,-6.32163,-74.5379,-2.7261,-71.3322,-71.0312 dDocent_Contig_9586 98 . N A 48.4541 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=51;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:51:-4.84431,-0.60206,0 dDocent_Contig_9587 98 . N T 209.842 . AB=0;ABP=0;AC=6;AF=0.75;AN=8;AO=7;CIGAR=1X;DP=8;DPB=8;DPRA=2.33333;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=216;QR=0;RO=0;RPL=7;RPP=18.2106;RPPR=0;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:1:0,0:0:0:0:0:0,0,0 ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:133:-12.299,-1.20412,0 1/1:2:0,2:0:0:2:63:-5.98383,-0.60206,0 1/1:1:0,1:0:0:1:20:-1.99996,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_9588 40 . A T 61.5279 . AB=0.173913;ABP=24.253;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=187;DPB=187;DPRA=0.70122;EPP=11.6962;EPPR=400.39;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.601093;PAO=0;PQA=0;PQR=0;PRO=0;QA=158;QR=7303;RO=183;RPL=0;RPP=11.6962;RPPR=400.39;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=183;SRP=400.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:1003:0:0:0,-7.52575,-90.5675 0/0:40:40,0:40:1569:0:0:0,-12.0412,-141.445 0/1:23:19,4:19:758:4:158:-7.67567,0,-61.6191 0/0:35:35,0:35:1408:0:0:0,-10.536,-126.969 0/0:34:34,0:34:1351:0:0:0,-10.235,-121.845 0/0:30:30,0:30:1214:0:0:0,-9.0309,-109.531 dDocent_Contig_9589 56 . C A 38.2565 . AB=0.1875;ABP=16.582;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=175;DPB=175;DPRA=0.503145;EPP=9.52472;EPPR=376.504;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.761628;PAO=0;PQA=0;PQR=0;PRO=0;QA=109;QR=6655;RO=172;RPL=3;RPP=9.52472;RPPR=376.504;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=172;SRP=376.504;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:982:0:0:0,-7.82678,-88.6775 0/0:48:48,0:48:1880:0:0:0,-14.4494,-169.417 0/0:32:32,0:32:1266:0:0:0,-9.63296,-114.215 0/0:39:39,0:39:1493:0:0:0,-11.7402,-134.621 0/0:14:14,0:14:543:0:0:0,-4.21442,-49.2098 0/1:16:13,3:13:491:3:109:-5.34847,0,-39.7145 dDocent_Contig_9590 106 . N A 442.636 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=14;CIGAR=2X;DP=14;DPB=14;DPRA=0;EPP=33.4109;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=481;QR=0;RO=0;RPL=0;RPP=33.4109;RPPR=0;RPR=14;RUN=1;SAF=0;SAP=33.4109;SAR=14;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:8:0,8:0:0:8:273:-24.9029,-2.40824,0 1|1:6:0,6:0:0:6:208:-19.0596,-1.80618,0 dDocent_Contig_9591 14 . T A 38.291 . AB=0.142857;ABP=26.2761;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=2X;DP=235;DPB=235;DPRA=0.732558;EPP=16.0391;EPPR=500.277;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=0.611354;PAO=0;PQA=0;PQR=0;PRO=0;QA=242;QR=8963;RO=229;RPL=0;RPP=16.0391;RPPR=500.277;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=229;SRP=500.277;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:21:18,3:18:695:3:122:-5.05086,0,-56.5514 0|0:42:39,3:39:1502:3:120:0,-1.45557,-124.238 0|0:38:38,0:38:1508:0:0:0,-11.4391,-135.969 0|0:58:58,0:58:2268:0:0:0,-17.4597,-204.293 0|0:36:36,0:36:1419:0:0:0,-10.8371,-127.965 0|0:40:40,0:40:1571:0:0:0,-12.0412,-141.634 dDocent_Contig_9592 139 . C A 124.608 . AB=0.130081;ABP=149.205;AC=1;AF=0.1;AN=10;AO=16;CIGAR=1X;DP=335;DPB=335;DPRA=2.32075;EPP=37.7539;EPPR=695.71;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=564;QR=10909;RO=319;RPL=0;RPP=37.7539;RPPR=695.71;RPR=16;RUN=1;SAF=0;SAP=37.7539;SAR=16;SRF=0;SRP=695.71;SRR=319;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:63:63,0:63:2124:0:0:0,-18.9649,-191.43 0/0:21:21,0:21:724:0:0:0,-6.32163,-65.4812 0/0:43:43,0:43:1493:0:0:0,-12.9443,-134.667 ./.:.:.:.:.:.:.:. 0/0:85:85,0:85:2891:0:0:0,-25.5875,-260.438 0/1:123:107,16:107:3677:16:564:-14.0628,0,-294.125 dDocent_Contig_9593 17 . C T 13171.5 . AB=0.201299;ABP=241.703;AC=2;AF=0.166667;AN=12;AO=62;CIGAR=1X3M1X;DP=936;DPB=936;DPRA=0;EPP=137.642;EPPR=971.487;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.997758;PAO=0;PQA=0;PQR=0;PRO=0;QA=2454;QR=17532;RO=446;RPL=0;RPP=137.642;RPPR=971.487;RPR=62;RUN=1;SAF=62;SAP=137.642;SAR=0;SRF=446;SRP=971.487;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:86:58,0,26:58:2286:0,26:0,1036:-68.0258,-85.4855,-273.561,0,-188.247,-180.421 0|0:117:88,14,14:88:3425:14,14:547,568:-20.3589,-1.89072,-279.118,0,-236.487,-277.239 0|1:86:47,29,10:47:1862:29,10:1146,389:-80.1547,0,-144.538,-62.341,-121.305,-212.593 0|1:105:73,19,12:73:2868:19,12:761,483:-40.7185,0,-230.16,-22.8861,-196.071,-255.155 0|0:197:28,0,169:28:1096:0,169:0,6692:-542.689,-551.117,-641.228,0,-90.5022,-39.6281 0|0:345:152,0,191:152:5995:0,191:0,7560:-576.424,-622.181,-1115.42,0,-493.283,-435.786 dDocent_Contig_9594 79 . T A 721.625 . AB=0.202643;ABP=177.35;AC=3;AF=0.25;AN=12;AO=55;CIGAR=1X;DP=429;DPB=429;DPRA=0;EPP=122.441;EPPR=812.97;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.654545;PAIREDR=0.482574;PAO=0;PQA=0;PQR=0;PRO=0;QA=1924;QR=13180;RO=373;RPL=35;RPP=11.8936;RPPR=29.1437;RPR=20;RUN=1;SAF=35;SAP=11.8936;SAR=20;SRF=220;SRP=29.1437;SRR=153;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:55,4:55:1961:4:137:0,-5.09261,-164.085 0/1:77:66,10:66:2359:10:356:-9.30579,0,-189.488 0/1:35:27,8:27:940:8:278:-14.8196,0,-74.3737 0/0:71:67,4:67:2389:4:141:0,-8.33698,-202.221 0/0:72:71,1:71:2547:1:39:0,-17.7776,-225.562 0/1:115:87,28:87:2984:28:973:-53.259,0,-234.158 dDocent_Contig_9595 25 . C G 1438.41 . AB=0.0136054;ABP=305.081;AC=0;AF=0;AN=12;AO=31;CIGAR=1X2M1X;DP=836;DPB=836;DPRA=0;EPP=70.3259;EPPR=1507.84;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1206;QR=27194;RO=693;RPL=0;RPP=70.3259;RPPR=1507.84;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=693;SRP=1507.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:74:65,5,4:65:2504:5,4:198,159:0,-3.27075,-207.33,-6.47665,-195.744,-210.838 0|0:151:128,7,7:128:5037:7,7:272,282:0,-16.1807,-428.413,-15.2818,-407.276,-427.52 0|0:124:115,7,2:115:4518:7,2:271,82:0,-12.3749,-381.837,-27.8453,-377.176,-398.835 0|0:168:148,10,9:148:5820:10,9:393,361:0,-12.2173,-487.943,-14.7929,-461.21,-490.824 0|0:147:109,2,34:109:4306:2,34:72,1335:-76.9805,-103.921,-457.645,0,-348.466,-344.104 0|0:172:128,0,34:128:5009:0,34:0,1322:-70.0822,-108.614,-520.439,0,-411.821,-401.586 dDocent_Contig_9596 79 . C T 1852.05 . AB=0.436464;ABP=9.35676;AC=6;AF=0.5;AN=12;AO=79;CIGAR=1X;DP=181;DPB=181;DPRA=0;EPP=174.557;EPPR=224.5;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.822785;PAIREDR=0.921569;PAO=0;PQA=0;PQR=0;PRO=0;QA=2766;QR=3626;RO=102;RPL=36;RPP=4.35716;RPPR=3.0103;RPR=43;RUN=1;SAF=36;SAP=4.35716;SAR=43;SRF=51;SRP=3.0103;SRR=51;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:8,4:8:283:4:141:-9.42467,0,-22.2003 0/1:18:15,3:15:533:3:104:-4.28455,0,-42.8856 0/1:19:10,9:10:360:9:292:-20.8729,0,-27.0243 0/1:43:24,19:24:852:19:659:-46.6883,0,-64.0557 0/1:28:15,13:15:531:13:465:-33.759,0,-39.6939 0/1:61:30,31:30:1067:31:1105:-81.397,0,-77.9796 dDocent_Contig_9597 45 . G A 72.6445 . AB=0.222222;ABP=9.04217;AC=3;AF=0.25;AN=12;AO=6;CIGAR=1X;DP=563;DPB=563;DPRA=0.124169;EPP=16.0391;EPPR=1212.52;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.994614;PAO=0;PQA=0;PQR=0;PRO=0;QA=234;QR=21919;RO=557;RPL=0;RPP=16.0391;RPPR=1212.52;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=557;SRP=1212.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:9:7,2:7:276:2:79:-4.78797,0,-22.4985 0/0:62:60,2:60:2404:2:78:0,-11.2606,-209.103 1/1:1:0,1:0:0:1:37:-3.69783,-0.30103,0 0/0:40:39,1:39:1531:1:40:0,-8.04552,-134.033 0/0:257:257,0:257:10094:0:0:0,-77.3647,-907.856 0/0:194:194,0:194:7614:0:0:0,-58.3998,-684.887 dDocent_Contig_9598 64 . G A 97.2621 . AB=0.131579;ABP=92.6121;AC=1;AF=0.0833333;AN=12;AO=22;CIGAR=1X;DP=450;DPB=450;DPRA=0.839286;EPP=50.7827;EPPR=932.4;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.545455;PAIREDR=0.663551;PAO=0;PQA=0;PQR=0;PRO=0;QA=834;QR=16125;RO=428;RPL=14;RPP=6.56362;RPPR=51.7365;RPR=8;RUN=1;SAF=14;SAP=6.56362;SAR=8;SRF=263;SRP=51.7365;SRR=165;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:76:66,10:66:2464:10:372:-10.9477,0,-199.072 0/0:100:100,0:100:3742:0:0:0,-30.103,-336.876 0/0:57:55,2:55:2084:2:82:0,-9.37903,-179.996 0/0:92:87,5:87:3351:5:197:0,-9.59018,-283.584 0/0:68:68,0:68:2535:0:0:0,-20.47,-228.331 0/0:57:52,5:52:1949:5:183:0,-0.335076,-158.817 dDocent_Contig_9599 50 . T C 76.7323 . AB=0.127273;ABP=69.3784;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=301;DPB=301;DPRA=0.824242;EPP=24.725;EPPR=634.909;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.7;PAIREDR=0.865979;PAO=0;PQA=0;PQR=0;PRO=0;QA=403;QR=11132;RO=291;RPL=10;RPP=24.725;RPPR=634.909;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=291;SRP=634.909;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:29,1:29:1126:1:40:0,-5.03522,-97.6405 0/0:55:55,0:55:2132:0:0:0,-16.5566,-192.086 0/1:55:48,7:48:1825:7:282:-9.19611,0,-147.917 0/0:51:49,2:49:1873:2:81:0,-7.6668,-161.108 0/0:33:33,0:33:1302:0:0:0,-9.93399,-117.457 0/0:77:77,0:77:2874:0:0:0,-23.1793,-258.8 dDocent_Contig_9600 16 . C T 77.8819 . AB=0.0972973;ABP=263.599;AC=2;AF=0.166667;AN=12;AO=21;CIGAR=1X;DP=558;DPB=558;DPRA=1.15444;EPP=48.6112;EPPR=1169.09;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=855;QR=21418;RO=537;RPL=0;RPP=48.6112;RPPR=1169.09;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=537;SRP=1169.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:61:61,0:61:2411:0:0:0,-18.3628,-217.144 0/1:95:86,9:86:3453:9:365:-4.61721,0,-282.201 0/0:62:62,0:62:2498:0:0:0,-18.6639,-224.953 0/1:90:81,9:81:3250:9:368:-6.39265,0,-265.464 0/0:114:111,3:111:4400:3:122:0,-22.9449,-384.567 0/0:136:136,0:136:5406:0:0:0,-40.9401,-486.377 dDocent_Contig_9602 58 . T A 8924.13 . AB=0.310345;ABP=30.1911;AC=1;AF=0.0833333;AN=12;AO=27;CIGAR=1X1M1X2M1X;DP=765;DPB=765;DPRA=0.638142;EPP=61.6401;EPPR=980.173;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1056;QR=17685;RO=450;RPL=27;RPP=61.6401;RPPR=980.173;RPR=0;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=450;SRP=980.173;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:74:74,0,0,0:74:2942:0,0,0:0,0,0:0,-22.2762,-264.894,-22.2762,-264.894,-264.894,-22.2762,-264.894,-264.894,-264.894 0|0:243:242,0,0,0:242:9480:0,0,0:0,0,0:0,-72.8493,-852.635,-72.8493,-852.635,-852.635,-72.8493,-852.635,-852.635,-852.635 0|1:87:39,27,21,0:39:1547:27,21,0:1056,832,0:-75.078,0,-119.214,-18.3374,-58.8638,-139.361,-86.8182,-127.342,-145.683,-214.162 0|0:97:84,0,0,13:84:3286:0,0,13:0,0,524:-18.307,-43.5935,-313.733,-43.5935,-313.733,-313.733,0,-270.541,-270.541,-266.627 0|0:92:0,0,0,92:0:0:0,0,92:0,0,3637:-327.365,-327.365,-327.365,-327.365,-327.365,-327.365,-27.6948,-27.6948,-27.6948,0 0|0:172:11,0,64,96:11:430:0,64,96:0,2500,3770:-476.885,-480.196,-515.547,-274.681,-310.031,-290.766,-170.166,-205.517,0,-176.618 dDocent_Contig_9603 107 . N G 66.4848 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=70;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_9604 58 . G A 993.881 . AB=0.163366;ABP=400.669;AC=3;AF=0.25;AN=12;AO=89;CIGAR=1X;DP=822;DPB=822;DPRA=0;EPP=196.271;EPPR=1590.36;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.337079;PAIREDR=0.538988;PAO=0;PQA=0;PQR=0;PRO=0;QA=3350;QR=27537;RO=731;RPL=71;RPP=71.5459;RPPR=258.029;RPR=18;RUN=1;SAF=71;SAP=71.5459;SAR=18;SRF=512;SRP=258.029;SRR=219;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:109:94,15:94:3388:15:556:-17.549,0,-272.222 0/0:162:153,9:153:5810:9:305:0,-20.9999,-495.034 0/0:76:70,6:70:2685:6:228:0,-1.99942,-220.927 0/1:200:160,38:160:6019:38:1457:-71.5881,0,-481.808 0/1:95:82,13:82:3150:13:486:-15.4728,0,-255.027 0/0:180:172,8:172:6485:8:318:0,-25.1998,-554.544 dDocent_Contig_9605 11 . A C 132.892 . AB=0.107784;ABP=226.152;AC=3;AF=0.25;AN=12;AO=25;CIGAR=1X;DP=355;DPB=355;DPRA=0;EPP=57.2971;EPPR=719.596;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9788;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.64;PAIREDR=0.412121;PAO=0;PQA=0;PQR=0;PRO=0;QA=1007;QR=13153;RO=330;RPL=0;RPP=57.2971;RPPR=719.596;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=330;SRP=719.596;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:34,3:34:1356:3:120:-0.0497919,0,-111.163 0/0:67:65,2:65:2581:2:82:0,-12.3893,-224.643 0/0:58:57,1:57:2288:1:36:0,-13.8615,-202.483 0/0:63:59,4:59:2376:4:159:0,-4.27314,-199.295 0/1:60:52,8:52:2053:8:325:-11.5578,0,-166.894 0/1:70:63,7:63:2499:7:285:-4.95231,0,-203.958 dDocent_Contig_9606 19 . C T 47.1401 . AB=0.133333;ABP=38.0434;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=215;DPB=215;DPRA=0.707865;EPP=20.3821;EPPR=452.505;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.875;PAIREDR=0.821256;PAO=0;PQA=0;PQR=0;PRO=0;QA=326;QR=8285;RO=207;RPL=0;RPP=20.3821;RPPR=452.505;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=207;SRP=452.505;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:26,4:26:1034:4:162:-5.93585,0,-84.3211 0/0:24:23,1:23:927:1:41:0,-3.13015,-79.6367 0/0:33:31,2:31:1248:2:82:0,-2.15431,-104.811 0/0:39:38,1:38:1509:1:41:0,-7.6456,-131.957 0/0:28:28,0:28:1113:0:0:0,-8.42884,-100.454 0/0:61:61,0:61:2454:0:0:0,-18.3628,-221.001 dDocent_Contig_9607 98 . N T 95.4818 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=3X;DP=3;DPB=34;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0.333333;PAIREDR=0;PAO=11;PQA=261;PQR=0;PRO=0;QA=99;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:1:0,1:0:0:1:33:-2.97694,-0.30103,0 .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:66:-6.26836,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_9608 57 . T C 4777.27 . AB=0.667832;ABP=72.9833;AC=6;AF=0.5;AN=12;AO=191;CIGAR=1X1M;DP=286;DPB=286;DPRA=0;EPP=417.762;EPPR=194.1;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6354;QR=2912;RO=88;RPL=191;RPP=417.762;RPPR=194.1;RPR=0;RUN=1;SAF=191;SAP=417.762;SAR=0;SRF=88;SRP=194.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:44:12,0,31:12:410:0,31:0,1027:-79.6964,-83.3088,-116.587,0,-33.5142,-24.1823 0|1:61:23,1,36:23:757:1,36:18,1155:-86.251,-91.8594,-152.744,0,-59.9688,-50.4449 0|1:19:3,1,15:3:107:1,15:18,480:-37.8988,-37.4917,-45.9194,0,-7.58013,-4.3395 0|1:40:8,2,30:8:287:2,30:21,1022:-80.7258,-81.8608,-104.67,0,-22.3729,-14.5792 0|1:58:28,0,29:28:912:0,29:0,1001:-73.1582,-81.587,-155.202,0,-73.8667,-65.1368 0|1:64:14,0,50:14:439:0,50:0,1669:-131.218,-135.433,-170.71,0,-35.5947,-20.5432 dDocent_Contig_9609 8 . A G 21793.3 . AB=0.68135;ABP=307.808;AC=6;AF=0.5;AN=12;AO=727;CIGAR=1X1M;DP=1067;DPB=1067;DPRA=0;EPP=1581.67;EPPR=680.51;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=27816;QR=11857;RO=312;RPL=0;RPP=1581.67;RPPR=680.51;RPR=727;RUN=1;SAF=727;SAP=1581.67;SAR=0;SRF=312;SRP=680.51;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:132:40,0,92:40:1542:0,92:0,3502:-275.575,-287.616,-414.242,0,-127.009,-99.3143 0|1:186:46,0,140:46:1732:0,140:0,5368:-427.12,-440.967,-582.881,0,-142.291,-100.147 0|1:208:83,0,125:83:3132:0,125:0,4794:-368.88,-393.865,-650.548,0,-257.063,-219.434 0|1:337:76,0,261:76:2902:0,261:0,9963:-794.881,-817.759,-1055.85,0,-238.476,-159.907 0|1:180:58,28,94:58:2206:28,94:1086,3614:-279.232,-207.462,-379.96,0,-91.6922,-152.626 0|1:24:9,0,15:9:343:0,15:0,575:-44.8652,-47.5745,-75.711,0,-28.5181,-24.0027 dDocent_Contig_9610 67 . T A 1576.05 . AB=0.355932;ABP=34.9199;AC=4;AF=0.333333;AN=12;AO=63;CIGAR=1X;DP=206;DPB=206;DPRA=3.05172;EPP=139.813;EPPR=313.531;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.972028;PAO=0;PQA=0;PQR=0;PRO=0;QA=2409;QR=5586;RO=143;RPL=63;RPP=139.813;RPPR=313.531;RPR=0;RUN=1;SAF=63;SAP=139.813;SAR=0;SRF=143;SRP=313.531;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:5:5,0:5:195:0:0:0,-1.50515,-17.9219 0/1:52:17,35:17:683:35:1358:-106.83,0,-46.1428 0/1:39:29,10:29:1150:10:369:-21.8143,0,-92.0415 0/1:50:39,11:39:1547:11:432:-24.1794,0,-124.42 0/1:36:29,7:29:1095:7:250:-12.0029,0,-87.9819 0/0:24:24,0:24:916:0:0:0,-7.22472,-82.7354 dDocent_Contig_9611 8 . A C 169.629 . AB=0.116667;ABP=232.752;AC=2;AF=0.166667;AN=12;AO=21;CIGAR=1X;DP=977;DPB=977;DPRA=0.451694;EPP=48.6112;EPPR=2074.59;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998952;PAO=0;PQA=0;PQR=0;PRO=0;QA=805;QR=35991;RO=954;RPL=0;RPP=48.6112;RPPR=2074.59;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=954;SRP=2074.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:103:103,0:103:3862:0:0:0,-31.0061,-347.693 0/1:146:128,18:128:4690:18:690:-18.4835,0,-378.222 0/1:34:31,3:31:1189:3:115:-0.489875,0,-97.0735 0/0:171:171,0:171:6440:0:0:0,-51.4761,-579.538 0/0:220:219,0:219:8374:0:0:0,-65.9256,-753.065 0/0:303:302,0:302:11436:0:0:0,-90.9111,-1028.45 dDocent_Contig_9612 45 . G A 784.01 . AB=0.226744;ABP=114.563;AC=4;AF=0.333333;AN=12;AO=41;CIGAR=1X;DP=311;DPB=311;DPRA=0.951852;EPP=92.0407;EPPR=521.88;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=53.7741;NS=6;NUMALT=1;ODDS=0;PAIRED=0.97561;PAIREDR=0.833333;PAO=0;PQA=0;PQR=0;PRO=0;QA=1592;QR=10144;RO=270;RPL=0;RPP=92.0407;RPPR=521.88;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=270;SRP=589.308;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:27,15:27:1008:15:580:-39.8951,0,-71.9966 0/0:85:83,2:83:3116:2:81:0,-17.9018,-243.327 0/1:45:36,9:36:1378:9:355:-18.7637,0,-110.61 0/1:46:38,8:38:1430:8:317:-15.0447,0,-109.512 0/1:39:32,7:32:1183:7:259:-11.9193,0,-89.7367 0/0:54:54,0:54:2029:0:0:0,-16.2556,-162.779 dDocent_Contig_9613 39 . T A 48.5736 . AB=0.138889;ABP=43.7857;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1M1D4M1X2M;DP=213;DPB=212;DPRA=1.00943;EPP=22.5536;EPPR=430.79;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.555556;PAIREDR=0.588832;PAO=0;PQA=0;PQR=0;PRO=0;QA=345;QR=7790;RO=197;RPL=0;RPP=22.5536;RPPR=430.79;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=197;SRP=430.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:36:31,5,0:31:1236:5,0:184,0:-6.07918,0,-100.681,-15.4111,-102.186,-117.225 0|0:45:39,3,2:39:1518:3,2:122,82:0,-1.67693,-125.504,-4.97036,-119.638,-129.101 0|0:26:24,1,0:24:946:1,0:39,0:0,-3.98897,-81.5779,-7.22472,-81.8789,-85.0847 0|0:25:25,0,0:25:996:0,0:0,0:0,-7.52575,-89.9404,-7.52575,-89.9404,-89.9404 0|0:48:47,0,0:47:1865:0,0:0,0:0,-14.1484,-167.66,-14.1484,-167.66,-167.66 0|0:33:31,0,2:31:1229:0,2:0,82:0,-9.33193,-110.481,-2.15431,-103.712,-103.11 dDocent_Contig_9614 44 . T C 218.553 . AB=0.129252;ABP=178.515;AC=1;AF=0.0833333;AN=12;AO=30;CIGAR=1X;DP=766;DPB=766;DPRA=1.17249;EPP=68.1545;EPPR=1596.87;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.991826;PAO=0;PQA=0;PQR=0;PRO=0;QA=1167;QR=29047;RO=734;RPL=0;RPP=68.1545;RPPR=1596.87;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=734;SRP=1596.87;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:124:124,0:124:4850:0:0:0,-37.3277,-436.418 0/0:138:135,2:135:5371:2:81:0,-33.9632,-475.562 0/1:147:128,19:128:5091:19:748:-23.3782,0,-413.809 0/0:134:130,3:130:5165:3:119:0,-29.266,-453.653 0/0:118:112,6:112:4392:6:219:0,-15.4704,-375.188 0/0:105:105,0:105:4178:0:0:0,-31.6081,-375.992 dDocent_Contig_9615 23 . C T 534.126 . AB=0.161765;ABP=205.724;AC=3;AF=0.25;AN=12;AO=37;CIGAR=1X;DP=365;DPB=365;DPRA=1.2898;EPP=83.3548;EPPR=715.253;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.698171;PAO=0;PQA=0;PQR=0;PRO=0;QA=1463;QR=13045;RO=328;RPL=0;RPP=83.3548;RPPR=715.253;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=328;SRP=715.253;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:60:48,12:48:1890:12:474:-24.9463,0,-152.241 0/1:74:61,13:61:2419:13:524:-25.2311,0,-195.589 0/0:46:43,3:43:1705:3:123:0,-2.38259,-142.211 0/1:70:62,8:62:2456:8:324:-8.45709,0,-200.118 0/0:49:49,0:49:1977:0:0:0,-14.7505,-178.121 0/0:66:65,1:65:2598:1:18:0,-18.068,-232.152 dDocent_Contig_9616 12 . G A 179.044 . AB=0.204545;ABP=36.372;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=266;DPB=266;DPRA=2.20482;EPP=31.2394;EPPR=552.393;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.84585;PAO=0;PQA=0;PQR=0;PRO=0;QA=522;QR=10093;RO=253;RPL=0;RPP=31.2394;RPPR=552.393;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=253;SRP=552.393;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:31,0:31:1245:0:0:0,-9.33193,-112.318 0/0:58:57,1:57:2282:1:41:0,-13.3652,-201.441 0/0:13:13,0:13:527:0:0:0,-3.91339,-47.7757 0/1:44:35,9:35:1405:9:359:-19.4273,0,-113.457 0/0:81:78,3:78:3062:3:122:0,-13.0109,-264.285 0/0:39:39,0:39:1572:0:0:0,-11.7402,-141.715 dDocent_Contig_9617 19 . A G 795.92 . AB=0.26087;ABP=71.5533;AC=4;AF=0.333333;AN=12;AO=36;CIGAR=1X;DP=200;DPB=200;DPRA=1.1129;EPP=81.1833;EPPR=359.132;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.805556;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1410;QR=6531;RO=164;RPL=0;RPP=81.1833;RPPR=359.132;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=164;SRP=359.132;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:11,8:11:442:8:313:-22.8122,0,-34.4157 0/1:58:46,12:46:1852:12:478:-25.906,0,-149.426 0/1:32:19,13:19:734:13:499:-35.6137,0,-56.7473 0/1:29:26,3:26:1019:3:120:-2.45744,0,-83.2742 0/0:26:26,0:26:1037:0:0:0,-7.82678,-93.6203 0/0:36:36,0:36:1447:0:0:0,-10.8371,-130.48 dDocent_Contig_9618 18 . C T 56.4737 . AB=0.1125;ABP=107.35;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=245;DPB=245;DPRA=0.969697;EPP=22.5536;EPPR=515.478;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=356;QR=9298;RO=236;RPL=0;RPP=22.5536;RPPR=515.478;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=236;SRP=515.478;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:817:0:0:0,-6.32163,-73.8442 0/0:30:30,0:30:1190:0:0:0,-9.0309,-107.376 0/0:14:14,0:14:532:0:0:0,-4.21442,-48.206 0/1:20:18,2:18:713:2:80:-1.57119,0,-58.4739 0/0:100:100,0:100:3944:0:0:0,-30.103,-354.956 0/1:60:53,7:53:2102:7:276:-7.14409,0,-171.299 dDocent_Contig_9619 12 . C T 24195.6 . AB=0.0383315;ABP=1645.11;AC=0;AF=0;AN=12;AO=34;CIGAR=1X3M1X1M1I2M;DP=1652;DPB=1759.38;DPRA=0;EPP=76.8404;EPPR=1711.96;GTI=0;LEN=1;MEANALT=3.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1346;QR=30981;RO=787;RPL=0;RPP=76.8404;RPPR=1711.96;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=787;SRP=1711.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:223:132,8,82:132:5198:8,82:311,3226:-225.639,-239.82,-665.009,0,-402.061,-402.931 0|0:271:118,3,148:118:4651:3,148:119,5884:-448.932,-474.658,-856.394,0,-372.87,-338.113 0|0:393:161,23,207:161:6367:23,207:916,8207:-627.024,-600.064,-1117.11,0,-448.537,-461.65 0|0:201:92,0,106:92:3648:0,106:0,4207:-318.645,-346.34,-646.622,0,-300.317,-268.408 0|0:318:129,0,186:129:5062:0,186:0,7334:-564.613,-603.446,-1019.73,0,-416.361,-360.37 0|0:246:155,0,89:155:6055:0,89:0,3552:-245.926,-292.586,-790.339,0,-497.803,-471.012 dDocent_Contig_9620 16 . G A 34.1912 . AB=0.117647;ABP=46.1843;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=187;DPB=187;DPRA=1.08475;EPP=20.3821;EPPR=391.704;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.5;PAIREDR=0.50838;PAO=0;PQA=0;PQR=0;PRO=0;QA=320;QR=7139;RO=179;RPL=0;RPP=20.3821;RPPR=391.704;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=179;SRP=391.704;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:30,4:30:1208:4:161:-4.64025,0,-98.758 0/0:41:39,2:39:1524:2:80:0,-4.75044,-129.804 0/0:14:13,1:13:520:1:41:0,-0.119853,-43.0526 0/0:39:38,1:38:1519:1:38:0,-7.9429,-133.157 0/0:31:31,0:31:1232:0:0:0,-9.33193,-111.151 0/0:28:28,0:28:1136:0:0:0,-8.42884,-102.52 dDocent_Contig_9621 15 . G T 2002.63 . AB=0.238482;ABP=222.211;AC=4;AF=0.333333;AN=12;AO=93;CIGAR=1X;DP=744;DPB=744;DPRA=0.544;EPP=204.957;EPPR=1416.64;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.986175;PAO=0;PQA=0;PQR=0;PRO=0;QA=3725;QR=25913;RO=651;RPL=0;RPP=204.957;RPPR=1416.64;RPR=93;RUN=1;SAF=93;SAP=204.957;SAR=0;SRF=651;SRP=1416.64;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:90:61,29:61:2398:29:1173:-78.752,0,-188.895 0/1:107:91,16:91:3633:16:650:-26.6233,0,-294.791 0/1:78:64,14:64:2552:14:550:-26.3571,0,-206.335 0/1:94:65,29:65:2583:29:1153:-75.7522,0,-204.3 0/0:200:200,0:200:7962:0:0:0,-60.206,-716.16 0/0:175:170,5:170:6785:5:199:0,-34.3919,-592.063 dDocent_Contig_9622 11 . T C 174.36 . AB=0.161765;ABP=70.5814;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X2M1X3M3I6M;DP=228;DPB=234.462;DPRA=0.725926;EPP=29.068;EPPR=443.819;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=0.833333;PAIREDR=0.896552;PAO=0;PQA=0;PQR=0;PRO=0;QA=483;QR=8063;RO=203;RPL=0;RPP=29.068;RPPR=443.819;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=203;SRP=443.819;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:34:33,0,0:33:1309:0,0:0,0:0,-9.93399,-117.977,-9.93399,-117.977,-117.977 0|0:30:28,1,1:28:1116:1,1:41,40:0,-5.03981,-96.6416,-5.1387,-93.6475,-96.731 0|0:40:36,0,4:36:1424:0,4:0,157:-2.46709,-13.3042,-130.497,0,-117.585,-116.381 0|0:56:52,0,3:52:2074:0,3:0,112:0,-15.6536,-186.487,-6.47605,-177.321,-176.417 0|1:22:17,4,1:17:674:4,1:161,40:-8.15358,0,-54.2711,-9.97651,-52.18,-65.1492 0|1:46:37,7,0:37:1466:7,0:281,0:-12.0131,0,-118.55,-23.1512,-120.657,-143.812 dDocent_Contig_9623 107 . N A 124.555 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X2M1X;DP=6;DPB=6;DPRA=4;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=38.25;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=133;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:4:0,4:0:0:4:133:-11.6758,-1.20412,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:1:0,0:0:0:0:0:0,0,0 1|1:1:0,0:0:0:0:0:0,0,0 .:.:.:.:.:.:.:. dDocent_Contig_9624 125 . A G 277.623 . AB=0.169492;ABP=114.97;AC=5;AF=0.416667;AN=12;AO=21;CIGAR=1X;DP=146;DPB=146;DPRA=0;EPP=48.6112;EPPR=274.444;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.992;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.666667;PAIREDR=0.688;PAO=0;PQA=0;PQR=0;PRO=0;QA=807;QR=4476;RO=125;RPL=0;RPP=48.6112;RPPR=274.444;RPR=21;RUN=1;SAF=0;SAP=48.6112;SAR=21;SRF=0;SRP=274.444;SRR=125;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:27,1:27:963:1:39:0,-4.53228,-83.0773 0/1:23:21,2:21:779:2:78:-0.479783,0,-63.5055 0/1:25:19,6:19:658:6:231:-13.6319,0,-52.0053 0/1:23:19,4:19:675:4:156:-7.4936,0,-54.1465 0/1:20:16,4:16:580:4:147:-7.56697,0,-46.5073 0/1:27:23,4:23:821:4:156:-6.28948,0,-66.082 dDocent_Contig_9625 30 . G C 2294.26 . AB=0.215886;ABP=347.266;AC=4;AF=0.333333;AN=12;AO=106;CIGAR=1X;DP=778;DPB=778;DPRA=0.855401;EPP=233.186;EPPR=1462.24;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.979167;PAO=0;PQA=0;PQR=0;PRO=0;QA=4259;QR=26765;RO=672;RPL=0;RPP=233.186;RPPR=1462.24;RPR=106;RUN=1;SAF=106;SAP=233.186;SAR=0;SRF=672;SRP=1462.24;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:139:125,14:125:4970:14:569:-9.70823,0,-405.351 0/1:138:94,44:94:3764:44:1752:-116.347,0,-297.216 0/1:84:67,17:67:2635:17:684:-36.6003,0,-211.996 0/1:130:99,31:99:3968:31:1254:-73.9926,0,-317.972 0/0:170:170,0:170:6746:0:0:0,-51.1751,-606.84 0/0:117:117,0:117:4682:0:0:0,-35.2205,-421.293 dDocent_Contig_9626 17 . T G 615.813 . AB=0.1625;ABP=240.461;AC=5;AF=0.416667;AN=12;AO=39;CIGAR=1X;DP=290;DPB=290;DPRA=0.96;EPP=87.6977;EPPR=548.05;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.692308;PAIREDR=0.784861;PAO=0;PQA=0;PQR=0;PRO=0;QA=1569;QR=10028;RO=251;RPL=0;RPP=87.6977;RPPR=548.05;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=251;SRP=548.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:50,0:50:1989:0:0:0,-15.0515,-179.199 0/1:62:55,7:55:2214:7:284:-7.26955,0,-180.762 0/1:59:52,7:52:2059:7:277:-7.53618,0,-167.729 0/1:48:37,11:37:1483:11:442:-25.6849,0,-119.266 0/1:42:34,8:34:1356:8:323:-16.7948,0,-109.654 0/1:29:23,6:23:927:6:243:-13.5177,0,-75.0043 dDocent_Contig_9629 13 . G A 229.04 . AB=0.178082;ABP=68.7196;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X3M1X;DP=220;DPB=220;DPRA=0.993197;EPP=31.2394;EPPR=450.334;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.384615;PAIREDR=0.456311;PAO=0;PQA=0;PQR=0;PRO=0;QA=527;QR=8060;RO=206;RPL=0;RPP=31.2394;RPPR=450.334;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=206;SRP=450.334;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:20:20,0:20:789:0:0:0,-6.0206,-71.3323 0|0:65:65,0:65:2533:0:0:0,-19.5669,-228.148 0|0:25:25,0:25:979:0:0:0,-7.52575,-88.4137 0|0:37:37,0:37:1462:0:0:0,-11.1381,-131.838 0|1:35:30,5:30:1167:5:203:-8.11701,0,-94.7822 0|1:38:29,8:29:1130:8:324:-18.0088,0,-90.4762 dDocent_Contig_9630 17 . C T 93.8834 . AB=0.142857;ABP=57.2971;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=159;DPB=159;DPRA=2.12987;EPP=20.3821;EPPR=330.903;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.986755;PAO=0;PQA=0;PQR=0;PRO=0;QA=321;QR=6069;RO=151;RPL=0;RPP=20.3821;RPPR=330.903;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=151;SRP=330.903;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:930:0:0:0,-6.92369,-84.0019 0/0:16:16,0:16:633:0:0:0,-4.81648,-57.3037 0/0:6:6,0:6:245:0:0:0,-1.80618,-22.4295 0/0:32:32,0:32:1277:0:0:0,-9.63296,-115.198 0/1:49:42,7:42:1689:7:281:-10.9112,0,-137.48 0/0:33:32,1:32:1295:1:40:0,-5.93831,-112.818 dDocent_Contig_9631 123 . T G 1809.87 . AB=0.454545;ABP=5.9714;AC=5;AF=0.416667;AN=12;AO=75;CIGAR=1X;DP=203;DPB=203;DPRA=0.868421;EPP=165.871;EPPR=280.959;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2647;QR=4569;RO=128;RPL=0;RPP=165.871;RPPR=280.959;RPR=75;RUN=1;SAF=0;SAP=165.871;SAR=75;SRF=0;SRP=280.959;SRR=128;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:38,0:38:1369:0:0:0,-11.4391,-123.503 0/1:22:17,5:17:602:5:173:-9.28755,0,-47.8845 0/1:30:8,22:8:294:22:744:-58.2433,0,-17.7815 0/1:28:20,8:20:725:8:284:-17.4734,0,-57.1484 0/1:42:28,14:28:989:14:501:-32.7831,0,-76.6817 0/1:43:17,26:17:590:26:945:-72.4214,0,-40.4819 dDocent_Contig_9632 26 . G T 54.9879 . AB=0.142857;ABP=41.7866;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=188;DPB=188;DPRA=1.14379;EPP=13.8677;EPPR=400.39;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.907104;PAO=0;PQA=0;PQR=0;PRO=0;QA=191;QR=7242;RO=183;RPL=0;RPP=13.8677;RPPR=400.39;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=183;SRP=400.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:801:0:0:0,-6.0206,-72.4054 0/0:28:28,0:28:1108:0:0:0,-8.42884,-100.002 0/0:43:43,0:43:1681:0:0:0,-12.9443,-151.522 0/0:30:30,0:30:1197:0:0:0,-9.0309,-108.006 0/1:35:30,5:30:1192:5:191:-7.02166,0,-97.0201 0/0:32:32,0:32:1263:0:0:0,-9.63296,-113.94 dDocent_Contig_9633 30 . T C 335.625 . AB=0.123077;ABP=323.854;AC=4;AF=0.333333;AN=12;AO=35;CIGAR=1X;DP=517;DPB=517;DPRA=0.723214;EPP=79.0118;EPPR=1049.66;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1404;QR=19218;RO=482;RPL=0;RPP=79.0118;RPPR=1049.66;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=482;SRP=1049.66;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:61:56,5:56:2238:5:203:-0.290226,0,-183.226 0/1:87:77,10:77:3061:10:400:-10.1697,0,-249.379 0/1:60:48,12:48:1903:12:492:-26.569,0,-153.416 0/1:52:47,5:47:1865:5:190:-1.81041,0,-152.408 0/0:112:112,0:112:4502:0:0:0,-33.7154,-405.107 0/0:145:142,3:142:5649:3:119:0,-32.5543,-497.125 dDocent_Contig_9634 9 . T C 1165.04 . AB=0.142626;ABP=687.468;AC=3;AF=0.25;AN=12;AO=153;CIGAR=1X;DP=1532;DPB=1532;DPRA=0;EPP=335.246;EPPR=2995.3;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.993464;PAIREDR=0.949927;PAO=0;PQA=0;PQR=0;PRO=0;QA=5889;QR=52614;RO=1378;RPL=0;RPP=335.246;RPPR=2995.3;RPR=153;RUN=1;SAF=153;SAP=335.246;SAR=0;SRF=1378;SRP=2995.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:348:327,21:327:12510:21:813:0,-31.263,-1051.88 0/0:358:332,26:332:12646:26:1002:0,-17.2775,-1047.12 0/0:209:191,18:191:7328:18:667:0,-2.56484,-599.018 0/1:287:258,28:258:9831:28:1088:-11.7591,0,-797.996 0/1:184:145,39:145:5532:39:1510:-80.7815,0,-442.475 0/1:146:125,21:125:4767:21:809:-29.1853,0,-385.12 dDocent_Contig_9635 93 . G T 2233.87 . AB=0.39759;ABP=25.693;AC=3;AF=0.25;AN=12;AO=99;CIGAR=1X;DP=358;DPB=358;DPRA=2.2844;EPP=217.986;EPPR=563.25;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3363;QR=8714;RO=258;RPL=99;RPP=217.986;RPPR=563.25;RPR=0;RUN=1;SAF=99;SAP=217.986;SAR=0;SRF=258;SRP=563.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:58:58,0:58:1926:0:0:0,-17.4597,-173.613 0/1:137:91,45:91:3095:45:1526:-96.3748,0,-237.539 0/0:44:44,0:44:1499:0:0:0,-13.2453,-135.204 0/1:58:39,19:39:1339:19:650:-41.3607,0,-103.349 0/1:54:19,35:19:629:35:1187:-90.8734,0,-40.6664 0/0:7:7,0:7:226:0:0:0,-2.10721,-20.6558 dDocent_Contig_9636 7 . A T 570.125 . AB=0.159664;ABP=242.456;AC=2;AF=0.166667;AN=12;AO=53;CIGAR=1X;DP=587;DPB=587;DPRA=1.52414;EPP=118.098;EPPR=1158.23;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.971805;PAO=0;PQA=0;PQR=0;PRO=0;QA=2035;QR=20295;RO=532;RPL=0;RPP=118.098;RPPR=1158.23;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=532;SRP=1158.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:106:87,19:87:3331:19:727:-33.8501,0,-268.026 0/0:97:96,0:96:3670:0:0:0,-28.8989,-330.117 0/0:165:150,14:150:5721:14:538:0,-0.806342,-466.102 0/1:132:113,19:113:4281:19:731:-26.3841,0,-345.63 0/0:48:48,0:48:1832:0:0:0,-14.4494,-165.132 0/0:39:38,1:38:1460:1:39:0,-7.84361,-127.782 dDocent_Contig_9637 9 . T G 358.198 . AB=0.242857;ABP=43.2136;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=389;DPB=389;DPRA=1.112;EPP=42.0968;EPPR=808.627;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.888889;PAIREDR=0.90027;PAO=0;PQA=0;PQR=0;PRO=0;QA=679;QR=13948;RO=371;RPL=0;RPP=42.0968;RPPR=808.627;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=371;SRP=808.627;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:70:53,17:53:1999:17:642:-37.0416,0,-159.075 0/0:69:68,1:68:2613:1:37:0,-17.0732,-231.665 0/0:52:52,0:52:1918:0:0:0,-15.6536,-172.863 0/0:69:69,0:69:2614:0:0:0,-20.7711,-235.454 0/0:64:64,0:64:2369:0:0:0,-19.2659,-213.424 0/0:65:65,0:65:2435:0:0:0,-19.5669,-219.361 dDocent_Contig_9638 12 . G A 255.853 . AB=0.151261;ABP=128.718;AC=2;AF=0.2;AN=10;AO=18;CIGAR=1X;DP=198;DPB=198;DPRA=2.25949;EPP=42.0968;EPPR=393.875;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=711;QR=7182;RO=180;RPL=0;RPP=42.0968;RPPR=393.875;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=180;SRP=393.875;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:883:0:0:0,-6.62266,-79.7797 0/1:65:58,7:58:2314:7:269:-5.00603,0,-188.849 0/1:54:43,11:43:1726:11:442:-23.8802,0,-139.302 0/0:31:31,0:31:1224:0:0:0,-9.33193,-110.431 0/0:26:26,0:26:1035:0:0:0,-7.82678,-93.4411 ./.:.:.:.:.:.:.:. dDocent_Contig_9639 58 . G T 2077.16 . AB=0.321285;ABP=72.0875;AC=4;AF=0.333333;AN=12;AO=83;CIGAR=1X;DP=581;DPB=581;DPRA=0;EPP=183.243;EPPR=1084.4;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.991968;PAO=0;PQA=0;PQR=0;PRO=0;QA=3329;QR=19833;RO=498;RPL=83;RPP=183.243;RPPR=1084.4;RPR=0;RUN=1;SAF=83;SAP=183.243;SAR=0;SRF=498;SRP=1084.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:63:45,18:45:1770:18:719:-46.0696,0,-140.554 0/1:72:38,34:38:1498:34:1369:-101.791,0,-113.384 0/1:36:30,6:30:1187:6:242:-11.3199,0,-96.2706 0/1:78:56,22:56:2229:22:877:-55.7573,0,-177.305 0/0:189:187,2:187:7448:2:82:0,-49.115,-662.165 0/0:143:142,1:142:5701:1:40:0,-39.0516,-508.893 dDocent_Contig_9640 26 . G A 256.559 . AB=0.357143;ABP=7.97367;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=366;DPB=366;DPRA=0.16568;EPP=24.725;EPPR=776.054;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.910112;PAO=0;PQA=0;PQR=0;PRO=0;QA=406;QR=13991;RO=356;RPL=0;RPP=24.725;RPPR=776.054;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=356;SRP=776.054;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:100:100,0:100:3929:0:0:0,-30.103,-353.612 0/0:55:55,0:55:2188:0:0:0,-16.5566,-197.097 0/0:36:36,0:36:1422:0:0:0,-10.8371,-128.234 0/0:147:147,0:147:5725:0:0:0,-44.2514,-515.067 0/1:10:6,4:6:243:4:163:-12.0481,0,-19.2379 0/1:18:12,6:12:484:6:243:-16.8296,0,-38.4925 dDocent_Contig_9641 100 . T G 1264.01 . AB=0.282723;ABP=81.3311;AC=6;AF=0.5;AN=12;AO=54;CIGAR=1X;DP=191;DPB=191;DPRA=0;EPP=120.27;EPPR=300.502;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.592593;PAIREDR=0.788321;PAO=0;PQA=0;PQR=0;PRO=0;QA=2144;QR=5444;RO=137;RPL=54;RPP=120.27;RPPR=300.502;RPR=0;RUN=1;SAF=0;SAP=120.27;SAR=54;SRF=0;SRP=300.502;SRR=137;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:21,7:21:835:7:286:-17.686,0,-67.0356 0/1:30:15,15:15:595:15:597:-45.0373,0,-44.856 0/1:23:14,9:14:546:9:355:-25.3838,0,-42.5546 0/1:36:28,8:28:1113:8:325:-18.7823,0,-89.6152 0/1:40:33,7:33:1304:7:271:-12.7118,0,-105.583 0/1:34:26,8:26:1051:8:310:-18.0216,0,-84.6456 dDocent_Contig_9643 1 . N G 229.517 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=243;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:80:-7.59157,-0.60206,0 1/1:4:0,4:0:0:4:163:-15.0584,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_9644 30 . A T 827.968 . AB=0.236364;ABP=102.622;AC=5;AF=0.416667;AN=12;AO=40;CIGAR=1X;DP=200;DPB=200;DPRA=0;EPP=89.8692;EPPR=350.446;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.475;PAIREDR=0.6;PAO=0;PQA=0;PQR=0;PRO=0;QA=1594;QR=6310;RO=160;RPL=0;RPP=89.8692;RPPR=350.446;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=160;SRP=350.446;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:34,1:34:1363:1:40:0,-6.54037,-118.932 0/1:39:31,8:31:1224:8:320:-17.426,0,-98.6954 0/1:18:9,9:9:347:9:369:-28.1569,0,-26.1636 0/1:32:28,4:28:1092:4:156:-4.78348,0,-88.9349 0/1:40:32,8:32:1272:8:324:-17.4876,0,-102.706 0/1:36:26,10:26:1012:10:385:-24.1645,0,-80.5361 dDocent_Contig_9645 67 . C T 1081.7 . AB=0.170455;ABP=335.048;AC=2;AF=0.166667;AN=12;AO=61;CIGAR=1X;DP=1469;DPB=1469;DPRA=0.811344;EPP=135.47;EPPR=3058.27;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999289;PAO=0;PQA=0;PQR=0;PRO=0;QA=2450;QR=56051;RO=1407;RPL=61;RPP=135.47;RPPR=3058.27;RPR=0;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=1407;SRP=3058.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:306:304,1:304:12071:1:41:0,-88.129,-1081.46 0/0:349:349,0:349:13933:0:0:0,-105.059,-1252.9 0/0:149:149,0:149:5863:0:0:0,-44.8535,-527.475 0/0:313:313,0:313:12529:0:0:0,-94.2224,-1126.71 0/1:173:154,19:154:6168:19:770:-17.5419,0,-502.779 0/1:179:138,41:138:5487:41:1639:-93.85,0,-439.773 dDocent_Contig_9646 69 . C T 643.791 . AB=0.278351;ABP=44.4026;AC=1;AF=0.1;AN=10;AO=29;CIGAR=1X;DP=322;DPB=322;DPRA=1.26;EPP=65.983;EPPR=639.252;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1125;QR=11542;RO=293;RPL=29;RPP=65.983;RPPR=639.252;RPR=0;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=293;SRP=639.252;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:97:70,27:70:2736:27:1051:-65.6802,0,-217.181 0/0:27:27,0:27:1063:0:0:0,-8.12781,-95.9621 0/0:50:48,2:48:1885:2:74:0,-8.02607,-162.842 0/0:112:112,0:112:4436:0:0:0,-33.7154,-399.206 ./.:.:.:.:.:.:.:. 0/0:36:36,0:36:1422:0:0:0,-10.8371,-128.243 dDocent_Contig_9647 21 . T C 46.5256 . AB=0.105882;ABP=117.69;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=499;DPB=499;DPRA=1.10549;EPP=35.5824;EPPR=1054;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.981405;PAO=0;PQA=0;PQR=0;PRO=0;QA=583;QR=19357;RO=484;RPL=0;RPP=35.5824;RPPR=1054;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=484;SRP=1054;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:71:70,1:70:2808:1:30:0,-18.3736,-249.822 0/0:106:101,5:101:4047:5:204:0,-13.1651,-345.461 0/0:47:47,0:47:1901:0:0:0,-14.1484,-171.284 0/1:85:76,9:76:3047:9:349:-6.17543,0,-248.724 0/0:101:101,0:101:4008:0:0:0,-30.404,-360.706 0/0:89:89,0:89:3546:0:0:0,-26.7917,-319.158 dDocent_Contig_9648 72 . T C 130.9 . AB=0.454545;ABP=3.20771;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=539;DPB=539;DPRA=0.104167;EPP=13.8677;EPPR=1162.58;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=8.67362e-19;PAIRED=1;PAIREDR=0.994382;PAO=0;PQA=0;PQR=0;PRO=0;QA=195;QR=19182;RO=534;RPL=5;RPP=13.8677;RPPR=1162.58;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=534;SRP=1162.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:504:0:0:0,-4.51545,-45.6812 0/0:19:19,0:19:636:0:0:0,-5.71957,-57.5536 0/0:28:28,0:28:1031:0:0:0,-8.42884,-93.0975 0/1:11:6,5:6:228:5:195:-14.6129,0,-17.5726 0/0:273:273,0:273:9870:0:0:0,-82.1812,-888.098 0/0:193:193,0:193:6913:0:0:0,-58.0988,-622.138 dDocent_Contig_9649 25 . T C 78.8927 . AB=0.16129;ABP=33.9012;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=124;DPB=124;DPRA=1.66667;EPP=13.8677;EPPR=261.416;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.865546;PAO=0;PQA=0;PQR=0;PRO=0;QA=204;QR=4767;RO=119;RPL=0;RPP=13.8677;RPPR=261.416;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=119;SRP=261.416;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:4:4,0:4:164:0:0:0,-1.20412,-15.1499 0/0:18:18,0:18:724:0:0:0,-5.41854,-65.4853 0/1:31:26,5:26:1060:5:204:-9.4121,0,-86.3533 0/0:23:23,0:23:891:0:0:0,-6.92369,-80.4848 0/0:21:21,0:21:847:0:0:0,-6.32163,-76.5417 0/0:27:27,0:27:1081:0:0:0,-8.12781,-97.5744 dDocent_Contig_9650 87 . G A 19775.6 . AB=0.19962;ABP=415.243;AC=1;AF=0.0833333;AN=12;AO=105;CIGAR=1X3M1X;DP=1065;DPB=1065;DPRA=0.534553;EPP=231.015;EPPR=541.535;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3509;QR=8217;RO=248;RPL=105;RPP=231.015;RPPR=541.535;RPR=0;RUN=1;SAF=105;SAP=231.015;SAR=0;SRF=248;SRP=541.535;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:59:11,47,0:11:367:47,0:1566,0:-123.506,0,-15.628,-126.818,-29.7764,-156.527 0|0:140:29,24,87:29:957:24,87:781,2953:-230.769,-176.458,-246.608,0,-14.3381,-51.1895 0|0:113:68,18,27:68:2256:18,27:616,903:-52.6409,-23.1059,-200.193,0,-132.495,-174.372 0|0:214:89,16,107:89:2936:16,107:546,3568:-262.035,-244.518,-477.073,0,-193.079,-205.178 0|0:246:20,0,226:20:665:0,226:0,7586:-622.681,-628.702,-682.513,-13.8891,-68.0328,0 0|0:293:31,0,258:31:1036:0,258:0,8692:-695.148,-704.48,-788.359,0,-83.9957,-6.32995 dDocent_Contig_9652 16 . T A 290.188 . AB=0.190476;ABP=55.4358;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1M1X4M;DP=133;DPB=130.833;DPRA=1.61667;EPP=33.4109;EPPR=222.329;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=563;QR=4004;RO=101;RPL=0;RPP=33.4109;RPPR=222.329;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=101;SRP=222.329;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:15:14,1,0,0:14:550:1,0,0:40,0,0:0,-0.519771,-45.8457,-4.21442,-46.1468,-49.4423,-4.21442,-46.1468,-49.4423,-49.4423 0|0:21:17,1,2,0:17:677:1,2,0:40,81,0:-1.5666,-3.38903,-58.8347,0,-52.4559,-55.149,-6.68411,-59.1357,-55.7511,-62.4309 0|0:34:32,0,0,2:32:1275:0,0,2:0,0,76:0,-9.63296,-114.641,-9.63296,-114.641,-114.641,-3.02035,-108.409,-108.409,-107.807 0|1:13:10,2,0,1:10:397:2,0,1:75,0,41:-3.10985,0,-32.0669,-6.12015,-32.669,-38.8088,-2.7245,-29.2837,-35.4234,-35.1224 0|1:34:17,0,8,9:17:680:0,8,9:0,321,365:-24.9855,-30.103,-86.1166,-3.65554,-59.6673,-57.2591,0,-56.0146,-29.5647,-53.3053 0|0:16:11,0,3,2:11:425:0,3,2:0,115,81:-6.11366,-9.42499,-44.324,0,-34.8872,-33.9841,-2.73722,-37.6424,-28.2052,-37.0404 dDocent_Contig_9653 49 . A T 582.532 . AB=0.193548;ABP=129.446;AC=2;AF=0.166667;AN=12;AO=30;CIGAR=1X;DP=230;DPB=230;DPRA=4.13333;EPP=68.1545;EPPR=354.789;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.97;PAO=0;PQA=0;PQR=0;PRO=0;QA=1194;QR=7894;RO=200;RPL=0;RPP=68.1545;RPPR=354.789;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=200;SRP=437.305;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:706:0:0:0,-5.41854,-63.8673 0/0:36:36,0:36:1419:0:0:0,-10.8371,-127.966 0/0:9:9,0:9:355:0:0:0,-2.70927,-32.3111 0/0:12:12,0:12:472:0:0:0,-3.61236,-42.8309 0/1:55:41,14:41:1631:14:554:-33.642,0,-130.467 0/1:100:84,16:84:3311:16:640:-27.833,0,-267.95 dDocent_Contig_9654 33 . T C 9107.27 . AB=0.269291;ABP=296.583;AC=4;AF=0.333333;AN=12;AO=171;CIGAR=1X3M1X1M1X;DP=635;DPB=635;DPRA=0;EPP=374.332;EPPR=456.848;GTI=0;LEN=1;MEANALT=3.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.988304;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6656;QR=8244;RO=209;RPL=0;RPP=374.332;RPPR=456.848;RPR=171;RUN=1;SAF=171;SAP=374.332;SAR=0;SRF=209;SRP=456.848;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:42:0,16,25:0:0:16,25:627,989:-132.943,-81.3868,-76.5703,-51.5499,0,-44.0242 1|0:96:20,35,35:20:767:35,35:1351,1380:-155.506,-50.5959,-103.001,-47.9912,0,-100.398 1|0:161:34,66,57:34:1330:66,57:2588,2247:-278.089,-75.5062,-164.984,-103.472,0,-195.66 0|1:51:22,17,11:22:872:17,11:659,436:-47.5064,0,-66.6573,-18.243,-35.8919,-86.7114 0|0:116:56,17,42:56:2218:17,42:672,1619:-116.059,-77.6106,-255.053,0,-127.261,-169.92 0|0:169:77,20,67:77:3057:20,67:759,2616:-191.846,-152.805,-398.445,0,-189.447,-231.497 dDocent_Contig_9655 7 . A T 12034.4 . AB=0.413893;ABP=47.5113;AC=6;AF=0.5;AN=12;AO=286;CIGAR=1X1M;DP=947;DPB=947;DPRA=0;EPP=624.051;EPPR=988.859;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10962;QR=17274;RO=454;RPL=0;RPP=624.051;RPPR=988.859;RPR=286;RUN=1;SAF=286;SAP=624.051;SAR=0;SRF=454;SRP=988.859;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:39:15,18,6:15:575:18,6:676,234:-50.8495,0,-41.7712,-36.1261,-27.9526,-81.518 0|1:112:22,0,89:22:828:0,89:0,3405:-273.064,-279.687,-347.528,0,-68.1057,-41.314 0|1:155:49,32,73:49:1848:32,73:1235,2806:-215.61,-128.934,-270.746,0,-50.0144,-129.468 0|1:228:110,22,96:110:4230:22,96:848,3676:-268.563,-232.041,-572.7,0,-277.645,-318.382 0|1:256:123,133,0:123:4625:133,0:5054,0:-377.829,0,-339.247,-414.856,-379.284,-793.763 0|1:157:135,0,22:135:5168:0,22:0,841:-28.7495,-69.3886,-493.5,0,-424.493,-417.87 dDocent_Contig_9656 114 . G A 392.665 . AB=0.168421;ABP=184.454;AC=2;AF=0.166667;AN=12;AO=41;CIGAR=1X1M1X;DP=746;DPB=746;DPRA=0.687898;EPP=92.0407;EPPR=1518.7;GTI=0;LEN=1;MEANALT=2.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997135;PAO=0;PQA=0;PQR=0;PRO=0;QA=1409;QR=23644;RO=698;RPL=0;RPP=92.0407;RPPR=1518.7;RPR=41;RUN=1;SAF=0;SAP=92.0407;SAR=41;SRF=0;SRP=1518.7;SRR=698;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:59:59,0:59:1992:0:0:0,-17.7608,-179.556 0|1:50:42,7:42:1442:7:242:-7.09656,0,-115.065 0|0:58:56,2:56:1889:2:65:0,-11.2865,-164.114 0|0:184:173,7:173:5841:7:244:0,-32.0566,-503.64 0|1:140:115,25:115:3940:25:858:-35.3918,0,-312.673 0|0:255:253,0:253:8540:0:0:0,-76.1606,-768.599 dDocent_Contig_9657 10 . G C 4734.87 . AB=0.0865922;ABP=534.451;AC=4;AF=0.333333;AN=12;AO=39;CIGAR=1X4M;DP=704;DPB=704;DPRA=0;EPP=87.6977;EPPR=1062.69;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1537;QR=19096;RO=488;RPL=0;RPP=87.6977;RPPR=1062.69;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=488;SRP=1062.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:84:39,40,5:39:1516:40,5:1565,205:-116.902,0,-112.509,-111.719,-107.627,-234.782 0|1:119:46,64,9:46:1822:64,9:2513,363:-192.802,0,-130.689,-176.727,-120.033,-323.981 0|1:74:39,29,6:39:1545:29,6:1129,239:-81.0291,0,-118.436,-73.0879,-107.486,-198.453 0|1:81:39,31,11:39:1520:31,11:1235,407:-89.9756,0,-115.614,-68.4431,-91.6704,-190.058 0|0:182:169,7,6:169:6590:7,6:272,242:0,-28.5331,-568.069,-30.9194,-550.227,-570.77 0|0:164:156,6,2:156:6103:6,2:244,81:0,-26.833,-526.789,-40.2819,-521.915,-541.44 dDocent_Contig_9658 70 . A G 2915.59 . AB=0.363354;ABP=55.2335;AC=4;AF=0.333333;AN=12;AO=119;CIGAR=1X;DP=521;DPB=521;DPRA=1.31014;EPP=261.416;EPPR=875.942;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4438;QR=15312;RO=402;RPL=119;RPP=261.416;RPPR=875.942;RPR=0;RUN=1;SAF=119;SAP=261.416;SAR=0;SRF=402;SRP=875.942;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:69:69,0:69:2628:0:0:0,-20.7711,-236.716 0/0:130:128,2:128:4804:2:76:0,-31.9192,-425.199 0/1:134:120,14:120:4679:14:515:-6.34684,0,-380.72 0/1:127:72,55:72:2725:55:2029:-144.611,0,-207.206 0/1:9:8,1:8:296:1:39:-1.18729,0,-24.2802 0/1:52:5,47:5:180:47:1779:-144.703,0,-0.896897 dDocent_Contig_9659 23 . G T 205.18 . AB=0.153061;ABP=105.468;AC=3;AF=0.25;AN=12;AO=17;CIGAR=1X;DP=161;DPB=161;DPRA=2.01562;EPP=39.9253;EPPR=315.702;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.823529;PAIREDR=0.798611;PAO=0;PQA=0;PQR=0;PRO=0;QA=681;QR=5730;RO=144;RPL=0;RPP=39.9253;RPPR=315.702;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=144;SRP=315.702;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:1043:0:0:0,-7.82678,-94.1619 0/1:36:31,5:31:1241:5:203:-7.81577,0,-101.119 0/0:6:6,0:6:243:0:0:0,-1.80618,-22.248 0/1:34:27,7:27:1052:7:276:-14.9722,0,-84.7264 0/1:28:25,3:25:998:3:122:-2.94365,0,-81.6872 0/0:31:29,2:29:1153:2:80:0,-1.74035,-96.4582 dDocent_Contig_9660 83 . T C 366.861 . AB=0.19697;ABP=108.294;AC=3;AF=0.25;AN=12;AO=31;CIGAR=1X;DP=288;DPB=288;DPRA=0.847273;EPP=70.3259;EPPR=561.079;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.645161;PAIREDR=0.7393;PAO=0;PQA=0;PQR=0;PRO=0;QA=1063;QR=8788;RO=257;RPL=12;RPP=6.44263;RPPR=4.03267;RPR=19;RUN=1;SAF=12;SAP=6.44263;SAR=19;SRF=123;SRP=4.03267;SRR=134;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:55:55,0:55:1859:0:0:0,-16.5566,-167.58 0/0:67:64,3:64:2234:3:97:0,-11.1181,-192.262 0/1:18:12,6:12:421:6:208:-13.6411,0,-32.8042 0/1:72:62,10:62:2075:10:344:-9.61772,0,-165.338 0/0:34:32,2:32:1092:2:70:0,-3.58762,-91.9343 0/1:42:32,10:32:1107:10:344:-18.6492,0,-87.287 dDocent_Contig_9661 33 . C G 1047.89 . AB=0.139151;ABP=482.557;AC=3;AF=0.25;AN=12;AO=65;CIGAR=1X1M1X;DP=582;DPB=582;DPRA=1.51176;EPP=144.156;EPPR=1097.43;GTI=0;LEN=1;MEANALT=1.6;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.954365;PAO=0;PQA=0;PQR=0;PRO=0;QA=2556;QR=20084;RO=504;RPL=0;RPP=144.156;RPPR=1097.43;RPR=65;RUN=1;SAF=65;SAP=144.156;SAR=0;SRF=504;SRP=1097.43;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:90:84,6,0:84:3345:6,0:234,0:0,-5.66213,-279.68,-25.2865,-281.487,-300.721 0|1:82:72,9,0:72:2882:9,0:352,0:-7.24853,0,-234.692,-28.9227,-237.402,-266.34 0|0:68:68,0,0:68:2730:0,0:0,0:0,-20.47,-245.816,-20.47,-245.816,-245.816 0|0:110:95,3,11:95:3810:3,11:114,432:-6.9549,-26.2041,-339.229,0,-304.609,-310.646 0|1:102:81,21,0:81:3216:21,0:826,0:-43.9485,0,-258.815,-68.332,-265.137,-333.075 0|1:130:104,26,0:104:4101:26,0:1030,0:-53.8594,0,-329.947,-85.1665,-337.774,-422.545 dDocent_Contig_9662 21 . A G 145.345 . AB=0.225806;ABP=23.254;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=189;DPB=189;DPRA=0.981013;EPP=18.2106;EPPR=398.218;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=278;QR=7074;RO=182;RPL=0;RPP=18.2106;RPPR=398.218;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=182;SRP=398.218;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1281:0:0:0,-9.93399,-115.568 0/0:9:9,0:9:357:0:0:0,-2.70927,-32.4932 0/0:4:4,0:4:152:0:0:0,-1.20412,-14.0456 0/1:31:24,7:24:948:7:278:-16.0573,0,-76.293 0/0:89:89,0:89:3454:0:0:0,-26.7917,-310.965 0/0:23:23,0:23:882:0:0:0,-6.92369,-79.6923 dDocent_Contig_9663 57 . G A 110.656 . AB=0.166667;ABP=49.335;AC=3;AF=0.25;AN=12;AO=8;CIGAR=1X;DP=93;DPB=93;DPRA=1.06667;EPP=20.3821;EPPR=187.585;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.976471;PAO=0;PQA=0;PQR=0;PRO=0;QA=321;QR=3380;RO=85;RPL=8;RPP=20.3821;RPPR=187.585;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=85;SRP=187.585;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:593:0:0:0,-4.51545,-53.7085 0/1:20:15,5:15:591:5:202:-12.5415,0,-47.5064 0/1:8:7,1:7:273:1:40:-1.58744,0,-22.5246 0/1:20:18,2:18:716:2:79:-1.47664,0,-58.7449 0/0:19:19,0:19:762:0:0:0,-5.71957,-68.9005 0/0:11:11,0:11:445:0:0:0,-3.31133,-40.4055 dDocent_Contig_9664 10 . G C 1959.38 . AB=0.250712;ABP=192.473;AC=4;AF=0.4;AN=10;AO=89;CIGAR=1X;DP=431;DPB=431;DPRA=0;EPP=196.271;EPPR=743.482;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0.707865;PAIREDR=0.953079;PAO=0;PQA=0;PQR=0;PRO=0;QA=3460;QR=12912;RO=341;RPL=0;RPP=196.271;RPPR=743.482;RPR=89;RUN=1;SAF=89;SAP=196.271;SAR=0;SRF=341;SRP=743.482;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:80:79,1:79:2986:1:41:0,-19.9878,-264.812 0/1:102:78,24:78:2957:24:941:-54.2957,0,-235.594 0/1:64:28,35:28:1053:35:1354:-102.786,0,-75.7276 0/1:142:123,19:123:4646:19:725:-22.8318,0,-375.443 ./.:.:.:.:.:.:.:. 0/1:43:33,10:33:1270:10:399:-23.3249,0,-101.643 dDocent_Contig_9665 16 . G T 397.911 . AB=0.301887;ABP=21.0786;AC=2;AF=0.166667;AN=12;AO=24;CIGAR=1X;DP=420;DPB=420;DPRA=0.854839;EPP=55.1256;EPPR=862.913;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9975;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.989899;PAO=0;PQA=0;PQR=0;PRO=0;QA=964;QR=15658;RO=396;RPL=0;RPP=55.1256;RPPR=862.913;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=396;SRP=862.913;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:27:20,7:20:781:7:285:-17.8966,0,-62.4725 0/0:67:67,0:67:2637:0:0:0,-20.169,-237.459 0/1:26:17,9:17:677:9:362:-25.1163,0,-53.4329 0/0:109:103,6:103:4085:6:240:0,-10.8371,-345.662 0/0:88:88,0:88:3455:0:0:0,-26.4906,-310.987 0/0:103:101,2:101:4023:2:77:0,-23.6979,-354.744 dDocent_Contig_9666 66 . C T 1589.74 . AB=0.341463;ABP=47.7638;AC=4;AF=0.333333;AN=12;AO=80;CIGAR=1X;DP=346;DPB=346;DPRA=0;EPP=176.728;EPPR=580.622;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.7375;PAIREDR=0.710526;PAO=0;PQA=0;PQR=0;PRO=0;QA=2866;QR=9529;RO=266;RPL=34;RPP=6.91895;RPPR=12.4472;RPR=46;RUN=1;SAF=34;SAP=6.91895;SAR=46;SRF=116;SRP=12.4472;SRR=150;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:66:46,20:46:1665:20:716:-44.8843,0,-130.23 0/1:52:40,12:40:1438:12:444:-24.6434,0,-114.038 0/1:36:17,19:17:626:19:684:-51.042,0,-45.827 0/1:51:32,19:32:1174:19:674:-45.6259,0,-90.594 0/0:92:84,8:84:2979:8:272:0,-2.89379,-243.471 0/0:49:47,2:47:1647:2:76:0,-7.53693,-141.26 dDocent_Contig_9667 24 . T C 527.302 . AB=0.162896;ABP=221.15;AC=5;AF=0.416667;AN=12;AO=40;CIGAR=1X;DP=274;DPB=274;DPRA=0;EPP=89.8692;EPPR=508.963;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.475;PAIREDR=0.480687;PAO=0;PQA=0;PQR=0;PRO=0;QA=1558;QR=8683;RO=233;RPL=0;RPP=89.8692;RPPR=508.963;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=233;SRP=508.963;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:53:49,4:49:1814:4:150:0,-2.09187,-149.656 0/1:41:36,5:36:1375:5:193:-5.3988,0,-111.69 0/1:40:32,8:32:1202:8:326:-17.6687,0,-96.434 0/1:44:38,5:38:1393:5:168:-2.11549,0,-112.314 0/1:50:42,8:42:1559:8:322:-14.2963,0,-125.52 0/1:46:36,10:36:1340:10:399:-22.4205,0,-107.032 dDocent_Contig_9668 12 . T C 683.226 . AB=0.234848;ABP=83.618;AC=2;AF=0.166667;AN=12;AO=31;CIGAR=1X;DP=327;DPB=327;DPRA=1.35385;EPP=70.3259;EPPR=645.766;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.612903;PAIREDR=0.621622;PAO=0;PQA=0;PQR=0;PRO=0;QA=1229;QR=11697;RO=296;RPL=0;RPP=70.3259;RPPR=645.766;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=296;SRP=645.766;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:40,0:40:1556:0:0:0,-12.0412,-140.28 0/0:40:40,0:40:1566:0:0:0,-12.0412,-141.171 0/0:35:35,0:35:1368:0:0:0,-10.536,-123.372 0/0:80:80,0:80:3154:0:0:0,-24.0824,-283.928 0/1:69:53,16:53:2135:16:632:-36.4442,0,-171.554 0/1:63:48,15:48:1918:15:597:-35.1002,0,-153.854 dDocent_Contig_9669 15 . C T 684.043 . AB=0.209877;ABP=121.449;AC=4;AF=0.333333;AN=12;AO=39;CIGAR=1X;DP=279;DPB=279;DPRA=0;EPP=87.6977;EPPR=524.164;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.641026;PAIREDR=0.65;PAO=0;PQA=0;PQR=0;PRO=0;QA=1563;QR=9627;RO=240;RPL=0;RPP=87.6977;RPPR=524.164;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=240;SRP=524.164;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:45,3:45:1811:3:115:0,-3.72623,-152.475 0/1:58:41,17:41:1651:17:683:-44.3377,0,-131.357 0/1:25:18,7:18:709:7:287:-18.6795,0,-56.606 0/1:28:24,4:24:951:4:157:-6.07908,0,-77.4615 0/0:69:67,2:67:2703:2:82:0,-12.9914,-235.6 0/1:51:45,6:45:1802:6:239:-6.52991,0,-147.034 dDocent_Contig_9670 46 . T C 267.119 . AB=0.173913;ABP=87.981;AC=3;AF=0.25;AN=12;AO=22;CIGAR=1X2M1X;DP=192;DPB=192;DPRA=0;EPP=50.7827;EPPR=367.818;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.590909;PAIREDR=0.410714;PAO=0;PQA=0;PQR=0;PRO=0;QA=869;QR=6660;RO=168;RPL=0;RPP=50.7827;RPPR=367.818;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=168;SRP=367.818;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:12:11,1:11:444:1:40:-0.383319,0,-36.7032 0|0:26:24,2:24:947:2:80:0,-0.234989,-77.945 0|0:33:29,2:29:1159:2:77:0,-2.41521,-97.2773 0|1:51:44,7:44:1726:7:275:-9.76626,0,-140.225 0|1:29:21,8:21:832:8:317:-20.1653,0,-66.4656 0|0:41:39,2:39:1552:2:80:0,-4.75044,-132.336 dDocent_Contig_9671 130 . G T 66.4633 . AB=0.1;ABP=16.9077;AC=3;AF=0.25;AN=12;AO=8;CIGAR=1X;DP=150;DPB=150;DPRA=1;EPP=20.3821;EPPR=311.359;GTI=0;LEN=1;MEANALT=1;MQM=55.25;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=297;QR=5070;RO=142;RPL=0;RPP=20.3821;RPPR=311.359;RPR=8;RUN=1;SAF=0;SAP=20.3821;SAR=8;SRF=0;SRP=311.359;SRR=142;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:10:9,1:9:337:1:39:-0.886264,0,-27.6728 0/0:36:36,0:36:1295:0:0:0,-10.8371,-116.838 0/0:63:58,5:58:2042:5:192:0,-1.31696,-166.373 0/0:33:33,0:33:1174:0:0:0,-9.93399,-105.938 1/1:2:0,2:0:0:2:66:-6.16345,-0.60206,0 0/0:6:6,0:6:222:0:0:0,-1.80618,-20.3354 dDocent_Contig_9672 36 . A G 985.302 . AB=0.174603;ABP=292.712;AC=5;AF=0.416667;AN=12;AO=59;CIGAR=1X;DP=380;DPB=380;DPRA=0;EPP=131.127;EPPR=697.881;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.254237;PAIREDR=0.4;PAO=0;PQA=0;PQR=0;PRO=0;QA=2387;QR=12708;RO=320;RPL=0;RPP=131.127;RPPR=697.881;RPR=59;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=320;SRP=697.881;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:83:65,18:65:2534:18:723:-40.4108,0,-203.214 0/1:73:65,8:65:2616:8:322:-7.37258,0,-213.589 0/1:37:25,12:25:977:12:489:-33.2226,0,-77.0893 0/1:53:42,11:42:1634:11:448:-24.7214,0,-131.326 0/0:65:61,4:61:2451:4:161:0,-4.69205,-205.858 0/1:69:62,6:62:2496:6:244:-1.54509,0,-203.992 dDocent_Contig_9673 10 . G A 14276.3 . AB=0.415017;ABP=79.0405;AC=6;AF=0.5;AN=12;AO=503;CIGAR=1X;DP=1212;DPB=1212;DPRA=0;EPP=1095.26;EPPR=1540.41;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.497;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.994036;PAIREDR=0.997175;PAO=0;PQA=0;PQR=0;PRO=0;QA=20124;QR=28343;RO=708;RPL=0;RPP=1095.26;RPPR=1540.41;RPR=503;RUN=1;SAF=503;SAP=1095.26;SAR=0;SRF=708;SRP=1540.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:129:43,86:43:1713:86:3455:-272.149,0,-115.558 0/1:144:59,85:59:2341:85:3434:-265.743,0,-167.497 0/1:110:38,72:38:1528:72:2886:-226.709,0,-104.646 0/1:178:88,90:88:3545:90:3578:-262.287,0,-265.481 0/1:361:276,84:276:11081:84:3338:-190.335,0,-887.726 0/1:290:204,86:204:8135:86:3433:-221.626,0,-644.407 dDocent_Contig_9674 1 . N G 61.3539 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=33;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-6.13431,-0.60206,0 dDocent_Contig_9675 26 . T A 93.3598 . AB=0.142857;ABP=65.0524;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=242;DPB=242;DPRA=1.50538;EPP=20.3821;EPPR=511.135;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.905983;PAO=0;PQA=0;PQR=0;PRO=0;QA=304;QR=9356;RO=234;RPL=0;RPP=20.3821;RPPR=511.135;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=234;SRP=511.135;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1090:0:0:0,-8.42884,-98.3788 0/0:48:48,0:48:1923:0:0:0,-14.4494,-173.261 0/1:56:48,8:48:1944:8:304:-10.8589,0,-158.294 0/0:29:29,0:29:1162:0:0:0,-8.72987,-104.86 0/0:37:37,0:37:1475:0:0:0,-11.1381,-133 0/0:44:44,0:44:1762:0:0:0,-13.2453,-158.794 dDocent_Contig_9676 19 . A G 96.0429 . AB=0.140351;ABP=67.0497;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=333;DPB=333;DPRA=1.03261;EPP=20.3821;EPPR=708.739;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=307;QR=12916;RO=325;RPL=0;RPP=20.3821;RPPR=708.739;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=325;SRP=708.739;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:57:49,8:49:1959:8:307:-10.8261,0,-159.348 0/0:45:45,0:45:1783:0:0:0,-13.5463,-160.685 0/0:52:52,0:52:2065:0:0:0,-15.6536,-186.04 0/0:36:36,0:36:1445:0:0:0,-10.8371,-130.297 0/0:71:71,0:71:2791:0:0:0,-21.3731,-251.304 0/0:72:72,0:72:2873:0:0:0,-21.6742,-258.666 dDocent_Contig_9678 36 . A G 326.037 . AB=0.259259;ABP=30.1939;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=272;DPB=272;DPRA=1.23853;EPP=33.4109;EPPR=563.25;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.949612;PAO=0;PQA=0;PQR=0;PRO=0;QA=556;QR=10120;RO=258;RPL=0;RPP=33.4109;RPPR=563.25;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=258;SRP=563.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:39,0:39:1531:0:0:0,-11.7402,-138.037 0/0:49:49,0:49:1920:0:0:0,-14.7505,-173.006 0/0:22:22,0:22:854:0:0:0,-6.62266,-77.1658 0/0:37:37,0:37:1464:0:0:0,-11.1381,-132.01 0/1:54:40,14:40:1566:14:556:-34.1265,0,-124.931 0/0:71:71,0:71:2785:0:0:0,-21.3731,-250.764 dDocent_Contig_9679 74 . A G 691.218 . AB=0.193333;ABP=125.539;AC=2;AF=0.166667;AN=12;AO=30;CIGAR=3M1X11M;DP=411;DPB=412.533;DPRA=1.49444;EPP=68.1545;EPPR=726.111;GTI=0;LEN=1;MEANALT=4.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.993994;PAO=0;PQA=0;PQR=0;PRO=0;QA=1123;QR=11514;RO=333;RPL=30;RPP=68.1545;RPPR=726.111;RPR=0;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=333;SRP=726.111;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:19:16,2,0:16:549:2,0:72,0:-1.26491,0,-44.2494,-6.08139,-44.8515,-50.7299 0|0:60:56,4,0:56:1891:4,0:147,0:0,-4.47192,-156.879,-16.8577,-158.083,-170.103 0|0:119:105,10,1:105:3681:10,1:341,39:0,-3.91883,-300.5,-28.3976,-300.304,-327.661 0|1:71:56,0,10:56:1913:0,10:0,385:-14.8106,-31.6683,-186.905,0,-155.287,-152.277 0|1:79:54,3,19:54:1888:3,19:109,699:-40.9403,-48.2931,-200.982,0,-144.733,-147.916 0|0:63:46,12,0:46:1592:12,0:400,0:-18.5796,0,-125.854,-32.427,-129.466,-161.831 dDocent_Contig_9680 90 . T A 315.279 . AB=0.333333;ABP=13.8677;AC=1;AF=0.1;AN=10;AO=15;CIGAR=1X;DP=125;DPB=125;DPRA=2.25;EPP=35.5824;EPPR=241.872;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=515;QR=3830;RO=110;RPL=15;RPP=35.5824;RPPR=241.872;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=110;SRP=241.872;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:490:0:0:0,-4.21442,-44.4326 0/1:45:30,15:30:1005:15:515:-33.1299,0,-77.206 0/0:25:25,0:25:883:0:0:0,-7.52575,-79.7882 0/0:18:18,0:18:630:0:0:0,-5.41854,-57.0264 0/0:23:23,0:23:822:0:0:0,-6.92369,-74.3033 ./.:.:.:.:.:.:.:. dDocent_Contig_9681 30 . A G 165.735 . AB=0.138298;ABP=109.828;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=392;DPB=392;DPRA=0.630872;EPP=31.2394;EPPR=825.998;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=526;QR=14950;RO=379;RPL=0;RPP=31.2394;RPPR=825.998;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=379;SRP=825.998;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:81:81,0:81:3193:0:0:0,-24.3834,-287.449 0/0:85:85,0:85:3349:0:0:0,-25.5875,-301.471 0/0:64:64,0:64:2487:0:0:0,-19.2659,-223.991 0/0:68:68,0:68:2714:0:0:0,-20.47,-244.375 0/1:41:36,5:36:1422:5:204:-6.4018,0,-115.896 0/1:53:45,8:45:1785:8:322:-13.3936,0,-144.916 dDocent_Contig_9682 22 . C A 149.68 . AB=0.137931;ABP=102.074;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=175;DPB=175;DPRA=1.97727;EPP=29.068;EPPR=356.96;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.583333;PAIREDR=0.748466;PAO=0;PQA=0;PQR=0;PRO=0;QA=475;QR=6537;RO=163;RPL=0;RPP=29.068;RPPR=356.96;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=163;SRP=356.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:44,0:44:1780:0:0:0,-13.2453,-160.403 0/1:47:43,4:43:1726:4:162:-0.818336,0,-141.402 0/0:14:14,0:14:553:0:0:0,-4.21442,-50.1079 0/1:40:32,8:32:1273:8:313:-16.4862,0,-102.794 0/0:15:15,0:15:609:0:0:0,-4.51545,-55.1474 0/0:15:15,0:15:596:0:0:0,-4.51545,-53.9766 dDocent_Contig_9683 49 . C T 126.864 . AB=0.190476;ABP=37.9607;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=129;DPB=129;DPRA=0.965517;EPP=20.3821;EPPR=265.758;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.625;PAIREDR=0.859504;PAO=0;PQA=0;PQR=0;PRO=0;QA=309;QR=4782;RO=121;RPL=0;RPP=20.3821;RPPR=265.758;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=121;SRP=265.758;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:611:0:0:0,-4.51545,-55.3275 0/0:33:33,0:33:1288:0:0:0,-9.93399,-116.176 0/0:7:7,0:7:286:0:0:0,-2.10721,-26.1148 0/0:32:32,0:32:1271:0:0:0,-9.63296,-114.658 0/1:10:8,2:8:315:2:75:-4.11004,0,-25.7022 0/1:32:26,6:26:1011:6:234:-11.7977,0,-81.6505 dDocent_Contig_9684 23 . G A 686.498 . AB=0.166667;ABP=240.425;AC=3;AF=0.25;AN=12;AO=48;CIGAR=1X;DP=454;DPB=454;DPRA=2.82667;EPP=107.241;EPPR=884.628;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.479167;PAIREDR=0.950739;PAO=0;PQA=0;PQR=0;PRO=0;QA=1896;QR=16285;RO=406;RPL=0;RPP=107.241;RPPR=884.628;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=406;SRP=884.628;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:85:79,6:79:3173:6:242:0,-3.4306,-263.477 0/0:30:30,0:30:1216:0:0:0,-9.0309,-109.711 0/1:79:59,20:59:2355:20:785:-47.1834,0,-188.325 0/0:93:92,1:92:3681:1:40:0,-24.0001,-327.308 0/1:71:58,13:58:2330:13:508:-24.6866,0,-188.477 0/1:96:88,8:88:3530:8:321:-0.358124,0,-288.825 dDocent_Contig_9685 1 . N G 1206.86 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=34;CIGAR=1X;DP=34;DPB=34;DPRA=0;EPP=76.8404;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1324;QR=0;RO=0;RPL=0;RPP=76.8404;RPPR=0;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:19:0,19:0:0:19:727:-65.745,-5.71957,0 1/1:10:0,10:0:0:10:397:-36.0841,-3.0103,0 1/1:5:0,5:0:0:5:200:-18.3795,-1.50515,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_9686 57 . T C 76.4823 . AB=0.0923077;ABP=96.8513;AC=3;AF=0.25;AN=12;AO=10;CIGAR=1X;DP=170;DPB=170;DPRA=1.09877;EPP=10.8276;EPPR=348.274;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.6;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=371;QR=6268;RO=159;RPL=10;RPP=24.725;RPPR=348.274;RPR=0;RUN=1;SAF=8;SAP=10.8276;SAR=2;SRF=159;SRP=348.274;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:72:-6.83637,-0.60206,0 0/0:47:46,0:46:1804:0:0:0,-13.8474,-162.161 0/0:14:14,0:14:533:0:0:0,-4.21442,-48.2982 0/0:22:20,2:20:783:2:67:0,-0.261971,-64.4214 0/1:65:59,6:59:2337:6:232:-1.67781,0,-190.915 0/0:20:20,0:20:811:0:0:0,-6.0206,-73.3051 dDocent_Contig_9687 30 . T C 2547.29 . AB=0.43128;ABP=11.6653;AC=3;AF=0.3;AN=10;AO=91;CIGAR=1X;DP=244;DPB=244;DPRA=4.26263;EPP=200.614;EPPR=335.246;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3586;QR=6050;RO=153;RPL=0;RPP=200.614;RPPR=335.246;RPR=91;RUN=1;SAF=91;SAP=200.614;SAR=0;SRF=153;SRP=335.246;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:848:0:0:0,-6.32163,-76.6314 0/1:56:30,26:30:1209:26:1034:-76.4925,0,-92.2261 0/1:60:15,45:15:585:45:1775:-141.898,0,-34.9234 ./.:.:.:.:.:.:.:. 0/1:95:75,20:75:2933:20:777:-41.6398,0,-235.47 0/0:12:12,0:12:475:0:0:0,-3.61236,-43.0987 dDocent_Contig_9688 39 . A T 232.132 . AB=0.16129;ABP=95.6831;AC=3;AF=0.25;AN=12;AO=19;CIGAR=1X;DP=236;DPB=236;DPRA=1.14857;EPP=44.2683;EPPR=474.22;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.684211;PAIREDR=0.589862;PAO=0;PQA=0;PQR=0;PRO=0;QA=754;QR=8569;RO=217;RPL=0;RPP=44.2683;RPPR=474.22;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=217;SRP=474.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:25,7:25:993:7:281:-16.0292,0,-80.0348 0/1:36:30,6:30:1199:6:232:-10.4045,0,-97.3501 0/1:25:23,2:23:918:2:82:-0.253928,0,-75.3975 0/0:47:44,3:44:1747:3:119:0,-3.0534,-146.356 0/0:35:35,0:35:1383:0:0:0,-10.536,-124.731 0/0:61:60,1:60:2329:1:40:0,-14.3671,-205.766 dDocent_Contig_9689 14 . A T 82.3967 . AB=0.146341;ABP=47.552;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=118;DPB=118;DPRA=1.06494;EPP=16.0391;EPPR=246.215;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=243;QR=4409;RO=112;RPL=0;RPP=16.0391;RPPR=246.215;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=112;SRP=246.215;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:18:14,4:14:555:4:161:-9.45636,0,-44.8716 0/0:15:15,0:15:574:0:0:0,-4.51545,-51.9894 0/1:23:21,2:21:832:2:82:-0.855988,0,-68.2707 0/0:13:13,0:13:516:0:0:0,-3.91339,-46.7859 0/0:22:22,0:22:873:0:0:0,-6.62266,-78.8789 0/0:27:27,0:27:1059:0:0:0,-8.12781,-95.607 dDocent_Contig_9690 8 . A G 91.4688 . AB=0.147059;ABP=76.5849;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X3M2X;DP=215;DPB=215;DPRA=1.39259;EPP=31.2394;EPPR=419.933;GTI=0;LEN=1;MEANALT=2;MQM=57.5385;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.994792;PAO=0;PQA=0;PQR=0;PRO=0;QA=464;QR=7454;RO=192;RPL=0;RPP=31.2394;RPPR=419.933;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=192;SRP=419.933;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:27:26,0,0:26:995:0,0:0,0:0,-7.82678,-89.464,-7.82678,-89.464,-89.464 0|0:51:45,1,3:45:1734:1,3:34,120:0,-10.7966,-152.869,-3.64347,-143.284,-145.138 0|1:34:27,6,0:27:1055:6,0:229,0:-10.6116,0,-84.918,-18.7394,-86.7241,-105.478 0|0:48:46,1,1:46:1802:1,1:36,41:0,-10.9434,-158.802,-10.438,-155.719,-158.346 0|1:34:28,4,2:28:1083:4,2:129,76:-1.93437,0,-87.7563,-4.1116,-82.7284,-92.5197 0|0:21:20,1,0:20:785:1,0:36,0:0,-2.72335,-67.3762,-6.0206,-67.6772,-70.6131 dDocent_Contig_9691 72 . A G 2897.67 . AB=0.484277;ABP=3.35173;AC=4;AF=0.333333;AN=12;AO=107;CIGAR=1X;DP=407;DPB=407;DPRA=0.582447;EPP=235.358;EPPR=652.281;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3806;QR=11252;RO=299;RPL=107;RPP=235.358;RPPR=652.281;RPR=0;RUN=1;SAF=107;SAP=235.358;SAR=0;SRF=299;SRP=652.281;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:36,0:36:1320:0:0:0,-10.8371,-119.074 1/1:29:0,29:0:0:29:1082:-97.6789,-8.72987,0 0/1:89:37,52:37:1408:52:1790:-134.536,0,-100.204 0/1:70:45,25:45:1648:25:906:-60.7732,0,-127.504 0/0:31:30,1:30:1143:1:28:0,-6.5322,-100.363 0/0:152:151,0:151:5733:0:0:0,-45.4555,-515.574 dDocent_Contig_9692 28 . C T 7880.84 . AB=0.550403;ABP=13.9552;AC=2;AF=0.166667;AN=12;AO=287;CIGAR=1X;DP=1042;DPB=1042;DPRA=2.58284;EPP=626.223;EPPR=1638.13;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992032;PAO=0;PQA=0;PQR=0;PRO=0;QA=10978;QR=29991;RO=753;RPL=0;RPP=626.223;RPPR=1638.13;RPR=287;RUN=1;SAF=287;SAP=626.223;SAR=0;SRF=753;SRP=1638.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:61:61,0:61:2433:0:0:0,-18.3628,-219.115 0/0:126:119,6:119:4667:6:216:0,-18.2462,-400.149 0/0:108:108,0:108:4300:0:0:0,-32.5112,-386.945 0/0:251:243,8:243:9754:8:311:0,-47.2049,-848.864 0/1:250:106,144:106:4190:144:5487:-418.512,0,-301.798 0/1:246:116,129:116:4647:129:4964:-372.794,0,-344.194 dDocent_Contig_9693 7 . A G 51.4611 . AB=0.134615;ABP=63.3104;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=197;DPB=197;DPRA=0.97;EPP=22.5536;EPPR=411.247;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.68617;PAO=0;PQA=0;PQR=0;PRO=0;QA=315;QR=7231;RO=188;RPL=0;RPP=22.5536;RPPR=411.247;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=188;SRP=411.247;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:45:43,2:43:1655:2:69:0,-6.99503,-142.66 0/0:47:47,0:47:1807:0:0:0,-14.1484,-162.882 0/1:21:19,2:19:734:2:72:-0.514284,0,-60.0692 0/1:31:26,5:26:998:5:174:-6.66662,0,-80.8 0/0:31:31,0:31:1186:0:0:0,-9.33193,-107.036 0/0:22:22,0:22:851:0:0:0,-6.62266,-76.9129 dDocent_Contig_9694 10 . C A 521.57 . AB=0.291667;ABP=30.1537;AC=3;AF=0.25;AN=12;AO=23;CIGAR=1X;DP=160;DPB=160;DPRA=1.00943;EPP=52.9542;EPPR=300.502;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=928;QR=5521;RO=137;RPL=0;RPP=52.9542;RPPR=300.502;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=137;SRP=300.502;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:33,2:33:1335:2:82:0,-2.75637,-112.629 0/1:23:13,10:13:525:10:401:-29.5251,0,-40.6735 0/0:51:51,0:51:2049:0:0:0,-15.3525,-184.588 0/1:37:27,10:27:1090:10:407:-25.8525,0,-87.2468 0/0:2:2,0:2:82:0:0:0,-0.60206,-7.77968 0/1:12:11,1:11:440:1:38:-0.184909,0,-36.3427 dDocent_Contig_9695 107 . N A 784.717 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=25;CIGAR=1X;DP=25;DPB=25;DPRA=0;EPP=57.2971;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=873;QR=0;RO=0;RPL=0;RPP=57.2971;RPPR=0;RPR=25;RUN=1;SAF=0;SAP=57.2971;SAR=25;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:72:-6.56353,-0.60206,0 1/1:9:0,9:0:0:9:317:-27.7914,-2.70927,0 1/1:9:0,9:0:0:9:315:-27.657,-2.70927,0 1/1:1:0,1:0:0:1:36:-3.45449,-0.30103,0 1/1:1:0,1:0:0:1:25:-2.48652,-0.30103,0 1/1:3:0,3:0:0:3:108:-9.67257,-0.90309,0 dDocent_Contig_9696 13 . G T 283.454 . AB=0.148148;ABP=148.177;AC=3;AF=0.25;AN=12;AO=23;CIGAR=1X;DP=268;DPB=268;DPRA=0.956522;EPP=52.9542;EPPR=535.021;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.652174;PAIREDR=0.808163;PAO=0;PQA=0;PQR=0;PRO=0;QA=931;QR=9775;RO=245;RPL=0;RPP=52.9542;RPPR=535.021;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=245;SRP=535.021;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1648:0:0:0,-12.3422,-148.547 0/0:51:51,0:51:2023:0:0:0,-15.3525,-182.264 0/1:48:43,5:43:1714:5:204:-4.29459,0,-140.032 0/1:38:33,5:33:1325:5:202:-7.12273,0,-108.071 0/0:41:38,3:38:1512:3:119:0,-1.24722,-125.229 0/1:49:39,10:39:1553:10:406:-22.1496,0,-125.262 dDocent_Contig_9697 19 . G A 31532.2 . AB=0.324354;ABP=987.814;AC=6;AF=0.5;AN=12;AO=1192;CIGAR=1X;DP=3675;DPB=3675;DPRA=0;EPP=2591.41;EPPR=5140.73;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=59.9208;NS=6;NUMALT=1;ODDS=0;PAIRED=0.78104;PAIREDR=0.648273;PAO=0;PQA=0;PQR=0;PRO=0;QA=47140;QR=92331;RO=2374;RPL=0;RPP=2591.41;RPPR=5158.09;RPR=1192;RUN=1;SAF=1192;SAP=2591.41;SAR=0;SRF=2372;SRP=5140.73;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:645:426,195:426:16383:195:7652:-500.967,0,-1286.07 0/1:751:480,249:480:18586:249:9848:-665.908,0,-1451.48 0/1:458:323,128:323:12528:128:5077:-320.648,0,-990.61 0/1:681:420,233:420:16411:233:9275:-637.236,0,-1278.73 0/1:638:389,228:389:15191:228:9017:-624.922,0,-1180.06 0/1:502:336,159:336:13232:159:6271:-414.766,0,-1035.4 dDocent_Contig_9698 13 . G T 107.484 . AB=0.152542;ABP=64.8789;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=364;DPB=364;DPRA=0.967213;EPP=22.5536;EPPR=771.712;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.39548;PAO=0;PQA=0;PQR=0;PRO=0;QA=331;QR=14138;RO=354;RPL=0;RPP=22.5536;RPPR=771.712;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=354;SRP=771.712;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:66:66,0:66:2641:0:0:0,-19.868,-237.809 0/0:99:99,0:99:3920:0:0:0,-29.802,-352.793 0/0:75:75,0:75:2999:0:0:0,-22.5772,-269.995 0/0:30:30,0:30:1183:0:0:0,-9.0309,-106.749 0/0:35:35,0:35:1423:0:0:0,-10.536,-128.316 0/1:59:49,9:49:1972:9:331:-12.2713,0,-159.801 dDocent_Contig_9699 107 . N G 1027.98 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=34;CIGAR=1X;DP=34;DPB=34;DPRA=0;EPP=76.8404;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1120;QR=0;RO=0;RPL=0;RPP=76.8404;RPPR=0;RPR=34;RUN=1;SAF=0;SAP=76.8404;SAR=34;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:12:0,12:0:0:12:412:-37.4086,-3.61236,0 1/1:7:0,7:0:0:7:214:-19.5602,-2.10721,0 ./.:.:.:.:.:.:.:. 1/1:14:0,14:0:0:14:458:-41.5316,-4.21442,0 1/1:1:0,1:0:0:1:36:-3.59827,-0.30103,0 dDocent_Contig_9700 29 . T C 53.3417 . AB=0.1875;ABP=16.582;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=111;DPB=111;DPRA=0.921053;EPP=11.6962;EPPR=235.358;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.850467;PAO=0;PQA=0;PQR=0;PRO=0;QA=160;QR=4271;RO=107;RPL=0;RPP=11.6962;RPPR=235.358;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=107;SRP=235.358;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:13,3:13:516:3:122:-6.55601,0,-41.9673 0/0:13:13,0:13:520:0:0:0,-3.91339,-47.1462 0/0:20:20,0:20:797:0:0:0,-6.0206,-72.0449 0/0:19:18,1:18:724:1:38:0,-1.9223,-61.6877 0/0:17:17,0:17:673:0:0:0,-5.11751,-60.8991 0/0:26:26,0:26:1041:0:0:0,-7.82678,-93.9773 dDocent_Contig_9701 69 . A T 562.43 . AB=0.169231;ABP=188.32;AC=3;AF=0.25;AN=12;AO=33;CIGAR=1X;DP=295;DPB=295;DPRA=1.95;EPP=74.6689;EPPR=571.936;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1318;QR=10261;RO=262;RPL=33;RPP=74.6689;RPPR=571.936;RPR=0;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=262;SRP=571.936;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1385:0:0:0,-10.536,-124.908 0/0:27:27,0:27:1033:0:0:0,-8.12781,-93.2633 0/1:55:35,20:35:1393:20:806:-56.2999,0,-109.075 0/0:38:38,0:38:1482:0:0:0,-11.4391,-133.627 0/1:101:92,9:92:3549:9:351:-1.54582,0,-289.064 0/1:39:35,4:35:1419:4:161:-3.13531,0,-116.218 dDocent_Contig_9702 20 . A G 3098.23 . AB=0.444898;ABP=9.47154;AC=6;AF=0.5;AN=12;AO=109;CIGAR=1X;DP=245;DPB=245;DPRA=0;EPP=239.701;EPPR=298.331;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.825688;PAIREDR=0.772059;PAO=0;PQA=0;PQR=0;PRO=0;QA=4365;QR=5394;RO=136;RPL=0;RPP=239.701;RPPR=298.331;RPR=109;RUN=1;SAF=109;SAP=239.701;SAR=0;SRF=136;SRP=298.331;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:52:21,31:21:820:31:1241:-96.3092,0,-58.4611 0/1:39:27,12:27:1076:12:488:-32.5311,0,-85.3835 0/1:49:32,17:32:1277:17:684:-47.1403,0,-100.445 0/1:35:19,16:19:747:16:635:-46.9444,0,-57.0141 0/1:37:19,18:19:758:18:724:-54.3476,0,-57.403 0/1:33:18,15:18:716:15:593:-43.7726,0,-54.8324 dDocent_Contig_9703 51 . T G 830.918 . AB=0.262069;ABP=74.3095;AC=5;AF=0.416667;AN=12;AO=40;CIGAR=1X;DP=172;DPB=172;DPRA=0;EPP=89.8692;EPPR=289.645;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.775;PAIREDR=0.712121;PAO=0;PQA=0;PQR=0;PRO=0;QA=1554;QR=4036;RO=132;RPL=40;RPP=89.8692;RPPR=289.645;RPR=0;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=132;SRP=289.645;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:17,3:17:499:3:119:-5.07458,0,-39.1712 0/1:22:20,2:20:605:2:81:-1.06307,0,-48.1096 0/1:36:29,7:29:907:7:263:-13.1833,0,-71.0776 0/0:27:25,2:25:771:2:74:0,-1.10238,-62.6471 0/1:32:17,15:17:540:15:576:-42.5377,0,-39.2691 0/1:35:24,11:24:714:11:441:-29.5097,0,-54.002 dDocent_Contig_9704 66 . A G 1107.07 . AB=0.392;ABP=15.6743;AC=2;AF=0.166667;AN=12;AO=60;CIGAR=1X;DP=585;DPB=585;DPRA=0;EPP=133.299;EPPR=1143.03;GTI=0;LEN=1;MEANALT=1;MQM=59.1333;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.933333;PAIREDR=0.939048;PAO=0;PQA=0;PQR=0;PRO=0;QA=2047;QR=17729;RO=525;RPL=60;RPP=133.299;RPPR=1143.03;RPR=0;RUN=1;SAF=60;SAP=133.299;SAR=0;SRF=525;SRP=1143.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:113:112,1:112:3788:1:35:0,-30.5178,-337.64 0/0:148:141,7:141:4792:7:231:0,-23.4744,-410.392 0/0:64:62,2:62:2076:2:69:0,-12.7281,-180.573 0/0:135:134,1:134:4500:1:35:0,-37.1404,-401.702 0/1:82:43,39:43:1452:39:1340:-96.2161,0,-106.288 0/1:43:33,10:33:1121:10:337:-17.7128,0,-88.251 dDocent_Contig_9705 35 . A C 3698.91 . AB=0.0524272;ABP=899.095;AC=4;AF=0.333334;AN=12;AO=27;CIGAR=3M1X1M1X1M1X5M8D4M;DP=778;DPB=598.72;DPRA=0;EPP=61.6401;EPPR=511.135;GTI=0;LEN=1;MEANALT=14.75;MQM=59.5926;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=871;QR=9130;RO=234;RPL=0;RPP=61.6401;RPPR=511.135;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=234;SRP=511.135;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:122:45,7,15,7,0,27,0,1,3,0:45:1752:7,15,7,0,27,0,1,3,0:242,599,209,0,903,0,40,121,0:-59.5564,-53.4389,-195.329,-23.7602,-148.1,-163.248,-56.41,-180.742,-151.069,-198.298,-73.1027,-197.436,-167.763,-200.405,-217.1,0,-124.333,-94.6588,-127.303,-143.995,-135.867,-73.1027,-197.436,-167.763,-200.405,-217.1,-143.995,-217.1,-69.8071,-194.141,-164.468,-197.11,-213.804,-140.7,-213.804,-213.503,-63.1266,-187.461,-157.788,-190.43,-207.124,-134.02,-207.124,-203.829,-206.221,-73.1027,-197.436,-167.763,-200.405,-217.1,-143.995,-217.1,-213.804,-207.124,-217.1 0|1:166:55,13,14,28,8,9,8,5,6,0:55:2142:13,14,28,8,9,8,5,6,0:451,561,866,286,289,270,190,242,0:-52.9176,-32.8137,-204.957,-23.2501,-162.65,-195.095,0,-139.394,-129.832,-167.624,-46.1544,-185.551,-175.99,-152.734,-219.803,-46.185,-185.581,-176.02,-152.764,-198.921,-219.531,-47.5913,-186.988,-177.427,-154.171,-200.328,-200.358,-221.239,-53.8955,-193.292,-183.731,-160.475,-206.633,-206.663,-208.069,-228.447,-49.5231,-188.92,-179.36,-156.103,-202.261,-202.291,-203.697,-210.002,-223.774,-69.4743,-208.87,-199.31,-176.052,-222.211,-222.24,-223.647,-229.952,-225.58,-245.53 0|0:67:14,6,12,8,0,6,4,6,0,0:14:550:6,12,8,0,6,4,6,0,0:204,479,203,0,203,132,224,0,0:-35.2505,-22.9184,-66.3588,0,-28.7051,-41.6393,-23.6248,-52.3239,-29.4108,-66.4597,-39.465,-68.165,-45.2517,-68.868,-84.7109,-23.0086,-51.7096,-28.7952,-52.414,-68.2551,-66.449,-28.8086,-57.5092,-34.5952,-58.2131,-74.0548,-57.5993,-72.8507,-21.3593,-50.0609,-27.1461,-50.7652,-66.6068,-50.1511,-55.9507,-64.8006,-39.465,-68.165,-45.2517,-68.868,-84.7109,-68.2551,-74.0548,-66.6068,-84.7109,-39.465,-68.165,-45.2517,-68.868,-84.7109,-68.2551,-74.0548,-66.6068,-84.7109,-84.7109 0|0:171:90,2,21,19,3,22,2,1,0,0:90:3538:2,21,19,3,22,2,1,0,0:70,842,606,109,735,41,36,0,0:-42.2988,-63.696,-354.132,0,-285.357,-284.73,-20.8689,-306.209,-242.527,-306.184,-60.4897,-345.833,-282.151,-303.003,-350.625,-9.89221,-295.235,-231.553,-252.407,-292.029,-294.308,-66.3084,-351.649,-287.968,-308.82,-348.443,-297.846,-356.742,-66.454,-351.797,-288.115,-308.967,-348.591,-297.993,-354.407,-357.191,-69.3915,-354.734,-291.052,-311.904,-351.528,-300.93,-357.344,-357.492,-360.429,-69.3915,-354.734,-291.052,-311.904,-351.528,-300.93,-357.344,-357.492,-360.429,-360.429 1|0:141:30,9,0,6,36,11,0,0,2,29:30:1148:9,0,6,36,11,0,0,2,29:313,0,204,1333,348,0,0,81,1148:-100.315,-83.898,-175.39,-109.346,-178.1,-203.548,-92.8049,-161.558,-187.006,-185.2,-0.287374,-69.0426,-94.4905,-77.9494,-83.6534,-81.3544,-150.107,-175.555,-159.014,-66.4994,-172.244,-109.346,-178.1,-203.548,-187.006,-94.4905,-175.555,-203.548,-109.346,-178.1,-203.548,-187.006,-94.4905,-175.555,-203.548,-203.548,-102.666,-171.42,-196.868,-180.327,-87.8107,-168.876,-196.868,-196.868,-196.266,-14.8553,-83.6119,-109.06,-92.5189,0,-81.0682,-109.06,-109.06,-102.381,-100.331 1|0:111:0,3,4,13,18,5,13,3,11,0:0:0:3,4,13,18,5,13,3,11,0:102,159,414,658,165,428,119,448,0:-90.7379,-82.4643,-81.5613,-77.6456,-69.3719,-76.4414,-57.4058,-49.1323,-44.3133,-53.4924,-36.9662,-28.6925,-23.8733,-3.63436,-31.5477,-77.3985,-69.1249,-64.306,-44.0666,-23.6267,-75.8933,-56.1456,-47.8721,-43.0531,-22.8144,-2.3739,-42.8064,-52.2322,-80.9448,-72.6711,-67.8523,-47.6125,-27.1727,-67.6052,-46.3523,-80.0417,-53.7736,-45.4998,-40.6807,-20.4409,0,-40.4339,-19.1806,-43.9801,-50.4623,-90.7379,-82.4643,-77.6456,-57.4058,-36.9662,-77.3985,-56.1456,-80.9448,-53.7736,-90.7379 dDocent_Contig_9706 40 . A G 87.6345 . AB=0.120482;ABP=106.849;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=300;DPB=300;DPRA=1.91244;EPP=24.725;EPPR=632.737;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.555172;PAO=0;PQA=0;PQR=0;PRO=0;QA=388;QR=11329;RO=290;RPL=0;RPP=24.725;RPPR=632.737;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=290;SRP=632.737;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:1011:0:0:0,-7.82678,-91.2863 0/0:48:48,0:48:1881:0:0:0,-14.4494,-169.502 0/0:44:44,0:44:1718:0:0:0,-13.2453,-154.849 0/1:83:73,10:73:2830:10:388:-10.2863,0,-229.83 0/0:45:45,0:45:1769:0:0:0,-13.5463,-159.423 0/0:54:54,0:54:2120:0:0:0,-16.2556,-190.987 dDocent_Contig_9707 24 . C A 208.387 . AB=0.178082;ABP=68.7196;AC=3;AF=0.25;AN=12;AO=14;CIGAR=1X;DP=136;DPB=136;DPRA=1.2;EPP=33.4109;EPPR=267.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0714286;PAIREDR=0.95082;PAO=0;PQA=0;PQR=0;PRO=0;QA=534;QR=4910;RO=122;RPL=0;RPP=33.4109;RPPR=267.93;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=122;SRP=267.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:24,4:24:971:4:163:-6.62959,0,-79.2576 0/1:20:16,4:16:643:4:157:-8.48582,0,-52.1823 0/0:14:14,0:14:551:0:0:0,-4.21442,-49.926 0/1:25:20,5:20:809:5:201:-10.9451,0,-65.5989 0/0:26:26,0:26:1047:0:0:0,-7.82678,-94.5203 0/0:23:22,1:22:889:1:13:0,-5.6237,-79.0166 dDocent_Contig_9708 107 . N C 52.2474 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=55;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:55:-5.22366,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_9709 11 . C T 85.116 . AB=0.0981595;ABP=231.628;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=886;DPB=886;DPRA=1.12725;EPP=37.7539;EPPR=1892.19;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993103;PAO=0;PQA=0;PQR=0;PRO=0;QA=653;QR=34829;RO=870;RPL=0;RPP=37.7539;RPPR=1892.19;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=870;SRP=1892.19;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:159:159,0:159:6370:0:0:0,-47.8638,-573.03 0/1:163:147,16:147:5872:16:653:-10.0345,0,-479.187 0/0:80:80,0:80:3145:0:0:0,-24.0824,-283.123 0/0:156:156,0:156:6242:0:0:0,-46.9607,-561.517 0/0:155:155,0:155:6263:0:0:0,-46.6596,-563.386 0/0:173:173,0:173:6937:0:0:0,-52.0782,-623.999 dDocent_Contig_9711 9 . T C 1972.43 . AB=0.330544;ABP=62.6213;AC=4;AF=0.333333;AN=12;AO=84;CIGAR=1X14M;DP=357;DPB=354.067;DPRA=0;EPP=185.414;EPPR=541.535;GTI=0;LEN=1;MEANALT=3.16667;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0.833333;PAIREDR=0.866935;PAO=0;PQA=0;PQR=0;PRO=0;QA=3205;QR=9674;RO=248;RPL=0;RPP=185.414;RPPR=541.535;RPR=84;RUN=1;SAF=84;SAP=185.414;SAR=0;SRF=248;SRP=541.535;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:39:15,2,0,18,2:15:586:2,0,18,2:80,0,679,81:-51.1213,-49.0448,-96.6197,-55.6368,-97.2217,-103.813,0,-41.5814,-48.1725,-42.754,-48.9554,-90.5413,-97.1324,-41.4918,-96.5304 0|1:68:41,1,0,22,0:41:1592:1,0,22,0:40,0,844,0:-56.9805,-66.0267,-196.543,-69.3228,-196.844,-200.14,0,-127.568,-130.863,-124.241,-69.3228,-196.844,-200.14,-130.863,-200.14 0|1:58:38,0,0,20,0:38:1494:0,0,20,0:0,0,760,0:-51.263,-62.7022,-185.599,-62.7022,-185.599,-185.599,0,-123.281,-123.281,-117.261,-62.7022,-185.599,-185.599,-123.281,-185.599 0|1:74:51,1,0,19,0:51:2009:1,0,19,0:40,0,736,0:-45.0993,-57.1562,-222.138,-60.4518,-222.439,-225.734,0,-161.976,-165.272,-159.552,-60.4518,-222.439,-225.734,-165.272,-225.734 0|0:66:54,0,5,4,3:54:2081:0,5,4,3:0,192,147,123:0,-16.2556,-187.121,-0.495015,-171.36,-169.855,-4.24683,-175.105,-159.343,-173.9,-6.09511,-176.967,-161.206,-164.951,-176.064 0|0:52:49,0,0,1,2:49:1912:0,0,1,2:0,0,39,81:0,-14.7505,-171.907,-14.7505,-171.907,-171.907,-11.5495,-168.701,-168.701,-168.4,-8.0614,-165.228,-165.228,-162.022,-164.626 dDocent_Contig_9712 19 . A C 51.2543 . AB=0.1875;ABP=16.582;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=153;DPB=153;DPRA=0.583942;EPP=9.52472;EPPR=328.731;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.473333;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=5867;RO=150;RPL=0;RPP=9.52472;RPPR=328.731;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=150;SRP=328.731;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:856:0:0:0,-6.62266,-77.3512 0/0:46:46,0:46:1788:0:0:0,-13.8474,-161.143 0/1:16:13,3:13:518:3:123:-6.64831,0,-42.1503 0/0:27:27,0:27:1044:0:0:0,-8.12781,-94.2562 0/0:26:26,0:26:1033:0:0:0,-7.82678,-93.2673 0/0:16:16,0:16:628:0:0:0,-4.81648,-56.8539 dDocent_Contig_9713 56 . G A 1095.49 . AB=0.157895;ABP=466.563;AC=5;AF=0.416667;AN=12;AO=72;CIGAR=1X;DP=495;DPB=495;DPRA=2.33846;EPP=159.356;EPPR=921.543;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2805;QR=16620;RO=423;RPL=72;RPP=159.356;RPPR=921.543;RPR=0;RUN=1;SAF=72;SAP=159.356;SAR=0;SRF=423;SRP=921.543;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:100:81,19:81:3192:19:726:-35.5553,0,-257.265 0/1:99:80,19:80:3178:19:740:-37.1189,0,-256.31 0/1:65:50,15:50:1962:15:590:-33.8701,0,-157.214 0/1:111:99,12:99:3836:12:481:-10.2258,0,-311.855 0/0:39:39,0:39:1534:0:0:0,-11.7402,-138.306 0/1:81:74,7:74:2918:7:268:-0.09675,0,-238.34 dDocent_Contig_9714 28 . G T 511.107 . AB=0.180645;ABP=140.317;AC=3;AF=0.25;AN=12;AO=33;CIGAR=7M1X;DP=350;DPB=336.5;DPRA=0.785915;EPP=74.6689;EPPR=641.423;GTI=0;LEN=1;MEANALT=2.4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.969697;PAIREDR=0.921769;PAO=0;PQA=0;PQR=0;PRO=0;QA=1304;QR=11454;RO=294;RPL=0;RPP=74.6689;RPPR=641.423;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=294;SRP=641.423;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:55:49,0,6:49:1923:0,6:0,244:-5.78218,-20.5326,-178.673,0,-158.545,-156.739 0|0:82:73,4,4:73:2834:4,4:147,159:0,-18.9602,-250.654,-8.75878,-238.768,-240.66 0|1:56:35,4,16:35:1357:4,16:150,643:-42.6477,-50.126,-160.403,0,-108.615,-106.882 0|0:71:67,2,0:67:2596:2,0:67,0:0,-18.7535,-231.416,-20.169,-232.019,-233.559 0|0:42:37,3,1:37:1450:3,1:117,41:0,-8.97715,-127.296,-7.7106,-124.815,-126.828 0|1:44:33,5,6:33:1294:5,6:179,217:-7.90269,-14.067,-119.003,0,-102.808,-104.845 dDocent_Contig_9715 18 . G T 1406.71 . AB=0.222222;ABP=196.03;AC=3;AF=0.25;AN=12;AO=73;CIGAR=1X;DP=509;DPB=509;DPRA=0;EPP=161.528;EPPR=949.772;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.945205;PAIREDR=0.944954;PAO=0;PQA=0;PQR=0;PRO=0;QA=2932;QR=17361;RO=436;RPL=0;RPP=161.528;RPPR=949.772;RPR=73;RUN=1;SAF=73;SAP=161.528;SAR=0;SRF=436;SRP=949.772;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:78:72,6:72:2858:6:243:0,-1.23216,-235.083 0/0:82:80,2:80:3192:2:77:0,-17.3763,-280.042 0/0:61:60,1:60:2370:1:38:0,-14.5656,-209.657 0/1:85:75,10:75:2988:10:408:-11.493,0,-243.421 0/1:113:95,18:95:3816:18:714:-30.5671,0,-309.418 0/1:90:54,36:54:2137:36:1452:-103.833,0,-165.409 dDocent_Contig_9716 191 . G A 569.759 . AB=0.240385;ABP=63.895;AC=2;AF=0.166667;AN=12;AO=25;CIGAR=1X;DP=221;DPB=221;DPRA=1.77778;EPP=57.2971;EPPR=428.619;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1009;QR=7816;RO=196;RPL=25;RPP=57.2971;RPPR=428.619;RPR=0;RUN=1;SAF=0;SAP=57.2971;SAR=25;SRF=0;SRP=428.619;SRR=196;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:37,0:37:1475:0:0:0,-11.1381,-132.996 0/1:54:38,16:38:1536:16:641:-41.7639,0,-122.221 0/1:50:41,9:41:1626:9:368:-18.4339,0,-131.519 0/0:58:58,0:58:2287:0:0:0,-17.4597,-205.988 0/0:4:4,0:4:162:0:0:0,-1.20412,-14.9667 0/0:18:18,0:18:730:0:0:0,-5.41854,-66.0245 dDocent_Contig_9717 1 . N G 68.3781 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=72;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:72:-6.83672,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_9719 39 . A G 5737.54 . AB=0.553672;ABP=11.8679;AC=6;AF=0.5;AN=12;AO=196;CIGAR=1X;DP=354;DPB=354;DPRA=0;EPP=428.619;EPPR=346.103;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.954082;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7666;QR=6233;RO=158;RPL=0;RPP=428.619;RPPR=346.103;RPR=196;RUN=1;SAF=196;SAP=428.619;SAR=0;SRF=158;SRP=346.103;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:60:24,36:24:958:36:1403:-108.459,0,-68.4611 0/1:66:32,34:32:1263:34:1359:-102.701,0,-94.0748 0/1:41:8,33:8:323:33:1261:-101.411,0,-17.0959 0/1:73:28,45:28:1072:45:1746:-135.392,0,-74.7872 0/1:46:25,21:25:984:21:828:-60.9854,0,-75.0094 0/1:68:41,27:41:1633:27:1069:-76.0275,0,-126.733 dDocent_Contig_9720 49 . C G 56.4208 . AB=0.106061;ABP=180.939;AC=2;AF=0.166667;AN=12;AO=26;CIGAR=1X;DP=373;DPB=373;DPRA=2.28667;EPP=59.4686;EPPR=756.511;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.615385;PAIREDR=0.585014;PAO=0;PQA=0;PQR=0;PRO=0;QA=1009;QR=13517;RO=347;RPL=0;RPP=59.4686;RPPR=756.511;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=347;SRP=756.511;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:52:50,2:50:1924:2:81:0,-7.96783,-165.684 0/0:85:81,4:81:3130:4:160:0,-10.8041,-267.015 0/1:45:40,5:40:1588:5:203:-5.10671,0,-129.613 0/1:87:78,9:78:3088:9:329:-3.75574,0,-251.818 0/0:30:30,0:30:1112:0:0:0,-9.0309,-100.359 0/0:74:68,6:68:2675:6:236:0,-0.665727,-219.272 dDocent_Contig_9721 17 . C A 9712.86 . AB=0.627604;ABP=57.3197;AC=7;AF=0.583333;AN=12;AO=305;CIGAR=1X;DP=448;DPB=448;DPRA=0;EPP=665.309;EPPR=311.359;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=12167;QR=5678;RO=142;RPL=0;RPP=665.309;RPPR=311.359;RPR=305;RUN=1;SAF=305;SAP=665.309;SAR=0;SRF=142;SRP=311.359;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:87:10,76:10:409:76:3013:-245.011,0,-10.9177 0/1:78:29,49:29:1156:49:1964:-153.475,0,-80.8378 0/1:37:20,17:20:810:17:673:-49.7597,0,-62.0775 0/1:73:43,30:43:1687:30:1205:-86.7504,0,-130.078 1/1:64:0,64:0:0:64:2550:-229.633,-19.2659,0 0/1:109:40,69:40:1616:69:2762:-215.878,0,-112.856 dDocent_Contig_9722 53 . A T 771.387 . AB=0.231884;ABP=46.0936;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=12M1X13M;DP=203;DPB=205.808;DPRA=0;EPP=37.7539;EPPR=265.828;GTI=0;LEN=1;MEANALT=6.5;MQM=60;MQMR=60;NS=6;NUMALT=8;ODDS=2.77556e-17;PAIRED=0.75;PAIREDR=0.832;PAO=0;PQA=0;PQR=0;PRO=0;QA=629;QR=4919;RO=125;RPL=16;RPP=37.7539;RPPR=274.444;RPR=0;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=124;SRP=265.828;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:39:30,7,0,0,0,1,0,0,0:30:1194:7,0,0,0,1,0,0,0:277,0,0,0,40,0,0,0:-13.7868,0,-96.236,-22.8177,-98.3432,-121.141,-22.8177,-98.3432,-121.141,-121.141,-22.8177,-98.3432,-121.141,-121.141,-121.141,-19.5214,-95.048,-117.846,-117.846,-117.846,-117.545,-22.8177,-98.3432,-121.141,-121.141,-121.141,-117.846,-121.141,-22.8177,-98.3432,-121.141,-121.141,-121.141,-117.846,-121.141,-121.141,-22.8177,-98.3432,-121.141,-121.141,-121.141,-117.846,-121.141,-121.141,-121.141 0|0:35:25,2,0,3,0,3,0,0,0:25:981:2,0,3,0,3,0,0,0:79,0,119,0,110,0,0,0:-2.28258,-3.3004,-83.4008,-9.80833,-84.0028,-90.5044,0,-74.2059,-80.7076,-79.8045,-9.80833,-84.0028,-90.5044,-80.7076,-90.5044,-0.817966,-75.0141,-81.5156,-71.7189,-81.5156,-80.6125,-9.80833,-84.0028,-90.5044,-80.7076,-90.5044,-81.5156,-90.5044,-9.80833,-84.0028,-90.5044,-80.7076,-90.5044,-81.5156,-90.5044,-90.5044,-9.80833,-84.0028,-90.5044,-80.7076,-90.5044,-81.5156,-90.5044,-90.5044,-90.5044 0|0:30:13,10,0,0,0,4,3,0,0:13:512:10,0,0,0,4,3,0,0:390,0,0,0,161,120,0,0:-28.1365,0,-39.1059,-32.0499,-42.1162,-74.1706,-32.0499,-42.1162,-74.1706,-74.1706,-32.0499,-42.1162,-74.1706,-74.1706,-74.1706,-18.7782,-28.8454,-60.9001,-60.9001,-60.9001,-59.6959,-22.1635,-32.2304,-64.2848,-64.2848,-64.2848,-51.0139,-63.3817,-32.0499,-42.1162,-74.1706,-74.1706,-74.1706,-60.9001,-64.2848,-74.1706,-32.0499,-42.1162,-74.1706,-74.1706,-74.1706,-60.9001,-64.2848,-74.1706,-74.1706 0|0:30:24,0,3,0,0,1,2,0,0:24:941:0,3,0,0,1,2,0,0:0,114,0,0,40,79,0,0:-2.11601,-9.34073,-86.725,0,-77.3772,-76.4741,-9.34073,-86.725,-77.3772,-86.725,-9.34073,-86.725,-77.3772,-86.725,-86.725,-6.04333,-83.4296,-74.0819,-83.4296,-83.4296,-83.1286,-2.83646,-80.2238,-70.8761,-80.2238,-80.2238,-76.9284,-79.6217,-9.34073,-86.725,-77.3772,-86.725,-86.725,-83.4296,-80.2238,-86.725,-9.34073,-86.725,-77.3772,-86.725,-86.725,-83.4296,-80.2238,-86.725,-86.725 0|0:27:14,0,0,0,3,1,1,3,3:14:540:0,0,0,3,1,1,3,3:0,0,0,118,38,40,122,123:-5.94125,-10.1557,-54.4864,-10.1557,-54.4864,-54.4864,-10.1557,-54.4864,-54.4864,-54.4864,-0.450724,-44.7798,-44.7798,-44.7798,-43.8767,-7.04068,-51.3704,-51.3704,-51.3704,-41.6638,-51.0693,-6.86046,-51.191,-51.191,-51.191,-41.4843,-48.075,-50.89,-0.0899881,-44.4213,-44.4213,-44.4213,-34.7144,-41.3053,-41.1258,-43.5183,0,-44.3319,-44.3319,-44.3319,-34.6249,-41.2158,-41.0364,-34.2663,-43.4288 0|1:42:19,0,0,0,1,1,2,13,4:19:751:0,0,0,1,1,2,13,4:0,0,0,40,41,80,507,160:-35.9406,-41.6602,-103.464,-41.6602,-103.464,-103.464,-41.6602,-103.464,-103.464,-103.464,-38.3648,-100.169,-100.169,-100.169,-99.868,-38.2754,-100.08,-100.08,-100.08,-96.7845,-99.7787,-35.0697,-96.874,-96.874,-96.874,-93.5788,-93.4895,-96.2719,0,-61.801,-61.801,-61.801,-58.5058,-58.4164,-55.2108,-57.8876,-28.4792,-90.2839,-90.2839,-90.2839,-86.9886,-86.8994,-83.6936,-48.6207,-89.0798 dDocent_Contig_9723 41 . T C 71.0733 . AB=0.136364;ABP=78.8144;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=317;DPB=317;DPRA=1.31937;EPP=3.20771;EPPR=4.82696;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.909091;PAIREDR=0.732026;PAO=0;PQA=0;PQR=0;PRO=0;QA=388;QR=10895;RO=306;RPL=0;RPP=26.8965;RPPR=667.481;RPR=11;RUN=1;SAF=5;SAP=3.20771;SAR=6;SRF=161;SRP=4.82696;SRR=145;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:50,0:50:1794:0:0:0,-15.0515,-161.725 0/0:60:60,0:60:2107:0:0:0,-18.0618,-189.883 0/0:60:58,2:58:2013:2:75:0,-10.9422,-174.305 0/0:40:40,0:40:1472:0:0:0,-12.0412,-132.763 0/1:66:57,9:57:2015:9:313:-8.63021,0,-161.744 0/0:41:41,0:41:1494:0:0:0,-12.3422,-134.741 dDocent_Contig_9724 24 . C A 2703.01 . AB=0.292225;ABP=142.875;AC=6;AF=0.5;AN=12;AO=109;CIGAR=1X;DP=373;DPB=373;DPRA=0;EPP=239.701;EPPR=576.279;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.568807;PAIREDR=0.511364;PAO=0;PQA=0;PQR=0;PRO=0;QA=4354;QR=10486;RO=264;RPL=0;RPP=239.701;RPPR=576.279;RPR=109;RUN=1;SAF=109;SAP=239.701;SAR=0;SRF=264;SRP=576.279;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:43:31,12:31:1234:12:475:-30.1536,0,-98.3853 0/1:74:42,32:42:1673:32:1261:-91.4824,0,-128.523 0/1:63:42,21:42:1672:21:850:-57.8469,0,-131.738 0/1:65:50,15:50:1967:15:602:-34.9514,0,-157.664 0/1:53:41,12:41:1662:12:480:-27.5961,0,-133.846 0/1:75:58,17:58:2278:17:686:-39.4927,0,-182.609 dDocent_Contig_9725 36 . G A 4704.96 . AB=0.225806;ABP=83.9852;AC=1;AF=0.0833333;AN=12;AO=28;CIGAR=1X1M1X;DP=269;DPB=269;DPRA=2.2963;EPP=63.8115;EPPR=194.1;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1080;QR=3265;RO=88;RPL=0;RPP=63.8115;RPPR=194.1;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=88;SRP=194.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:19:10,6,3:10:368:6,3:231,119:-15.9465,0,-28.2574,-9.15727,-20.2613,-38.3291 0|0:52:14,0,37:14:513:0,37:0,1454:-115.66,-119.875,-161.793,0,-42.1815,-31.0434 0|0:70:23,20,27:23:847:20,27:779,1074:-81.5031,-24.4099,-87.6251,0,-5.20772,-61.1102 0|0:35:19,2,14:19:687:2,14:70,566:-40.9929,-41.0255,-96.4629,0,-50.3818,-51.86 0|0:75:22,0,53:22:850:0,53:0,2039:-161.12,-167.743,-237.555,0,-70.1975,-54.2429 0|0:18:0,0,18:0:0:0,18:0,713:-64.495,-64.495,-64.495,-5.41854,-5.41854,0 dDocent_Contig_9726 3 . A T 4211.47 . AB=0.372361;ABP=76.7362;AC=6;AF=0.5;AN=12;AO=194;CIGAR=1X;DP=521;DPB=521;DPRA=0;EPP=424.276;EPPR=710.91;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.889571;PAO=0;PQA=0;PQR=0;PRO=0;QA=6527;QR=11926;RO=326;RPL=0;RPP=424.276;RPPR=710.91;RPR=194;RUN=1;SAF=0;SAP=424.276;SAR=194;SRF=326;SRP=710.91;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:72:49,23:49:1789:23:767:-47.667,0,-139.614 0/1:100:78,22:78:2840:22:747:-37.4431,0,-225.725 0/1:100:66,34:66:2417:34:1133:-72.165,0,-187.673 0/1:94:54,39:54:1984:39:1307:-89.5812,0,-150.481 0/1:101:46,55:46:1687:55:1854:-136.738,0,-121.708 0/1:54:33,21:33:1209:21:719:-48.7745,0,-92.8605 dDocent_Contig_9727 50 . T C 160.851 . AB=0.2;ABP=34.2795;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=220;DPB=220;DPRA=1.11111;EPP=20.3821;EPPR=463.362;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.875;PAIREDR=0.929245;PAO=0;PQA=0;PQR=0;PRO=0;QA=322;QR=8388;RO=212;RPL=8;RPP=20.3821;RPPR=463.362;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=212;SRP=463.362;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:40:32,8:32:1239:8:322:-17.3069,0,-99.7357 0/0:41:41,0:41:1625:0:0:0,-12.3422,-146.486 0/0:37:37,0:37:1457:0:0:0,-11.1381,-131.38 0/0:40:40,0:40:1575:0:0:0,-12.0412,-141.993 0/0:27:27,0:27:1073:0:0:0,-8.12781,-96.8584 0/0:35:35,0:35:1419:0:0:0,-10.536,-127.959 dDocent_Contig_9728 178 . A C 36.2641 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=79;DPB=79;DPRA=1.21739;EPP=35.5824;EPPR=141.985;GTI=0;LEN=1;MEANALT=1;MQM=7;MQMR=7;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=586;QR=2595;RO=64;RPL=0;RPP=35.5824;RPPR=141.985;RPR=15;RUN=1;SAF=0;SAP=35.5824;SAR=15;SRF=0;SRP=141.985;SRR=64;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:17,2:17:693:2:78:0,-4.38999,-9.44813 1/1:7:1,6:1:39:6:232:-3.14884,-1.40743,0 0/0:17:17,0:17:690:0:0:0,-5.11751,-10.7776 0/0:12:8,4:8:320:4:158:0,-1.02311,-2.51936 0/0:6:6,0:6:242:0:0:0,-1.80618,-3.84908 0/0:18:15,3:15:611:3:118:0,-3.45911,-7.55856 dDocent_Contig_9729 59 . C G 1168.35 . AB=0.377358;ABP=9.93443;AC=3;AF=0.25;AN=12;AO=38;CIGAR=1X;DP=312;DPB=312;DPRA=0.589212;EPP=85.5263;EPPR=597.994;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1482;QR=10754;RO=274;RPL=38;RPP=85.5263;RPPR=597.994;RPR=0;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=274;SRP=597.994;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:54,0:54:2128:0:0:0,-16.2556,-191.71 0/0:59:59,0:59:2325:0:0:0,-17.7608,-209.421 0/0:94:94,0:94:3728:0:0:0,-28.2968,-335.545 0/0:34:34,0:34:1329:0:0:0,-10.235,-119.88 0/1:53:33,20:33:1244:20:760:-52.7498,0,-96.2679 1/1:18:0,18:0:0:18:722:-65.3067,-5.41854,0 dDocent_Contig_9730 139 . A T 120.487 . AB=0.8;ABP=6.91895;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=174;DPB=174;DPRA=0.450704;EPP=16.0391;EPPR=367.818;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=238;QR=6689;RO=168;RPL=0;RPP=16.0391;RPPR=367.818;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=367.818;SRR=168;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:13:13,0:13:508:0:0:0,-3.91339,-46.0612 0/0:52:52,0:52:2084:0:0:0,-15.6536,-187.741 0/0:32:32,0:32:1299:0:0:0,-9.63296,-117.169 0/0:45:45,0:45:1788:0:0:0,-13.5463,-161.134 0/0:27:25,2:25:969:2:75:0,-1.00822,-80.3869 0/1:5:1,4:1:41:4:163:-13.5533,0,-2.58942 dDocent_Contig_9731 51 . G C 986.434 . AB=0.243243;ABP=108.943;AC=5;AF=0.416667;AN=12;AO=48;CIGAR=1X;DP=230;DPB=230;DPRA=0;EPP=107.241;EPPR=396.047;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=59.6851;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1917;QR=7208;RO=181;RPL=48;RPP=107.241;RPPR=396.047;RPR=0;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=181;SRP=396.047;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:16,6:16:633:6:243:-15.6253,0,-50.4114 0/0:45:41,3:41:1648:3:120:0,-2.46461,-137.09 0/1:47:34,13:34:1350:13:510:-32.0925,0,-107.61 0/1:40:36,4:36:1418:4:163:-3.01723,0,-115.826 0/1:41:28,13:28:1106:13:519:-34.7146,0,-87.2175 0/1:35:26,9:26:1053:9:362:-22.4087,0,-84.5233 dDocent_Contig_9732 7 . A C 737.468 . AB=0.304348;ABP=18.305;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=2X12M1X;DP=103;DPB=102.067;DPRA=1.35294;EPP=33.4109;EPPR=120.27;GTI=0;LEN=1;MEANALT=4.5;MQM=47.7857;MQMR=60;NS=6;NUMALT=6;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=461;QR=2089;RO=54;RPL=0;RPP=33.4109;RPPR=120.27;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=54;SRP=120.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:12:12,0,0,0,0,0,0:12:463:0,0,0,0,0,0:0,0,0,0,0,0:0,-3.61236,-42.0203,-3.61236,-42.0203,-42.0203,-3.61236,-42.0203,-42.0203,-42.0203,-3.61236,-42.0203,-42.0203,-42.0203,-42.0203,-3.61236,-42.0203,-42.0203,-42.0203,-42.0203,-42.0203,-3.61236,-42.0203,-42.0203,-42.0203,-42.0203,-42.0203,-42.0203 0|0:7:6,1,0,0,0,0,0:6:223:1,0,0,0,0,0:40,0,0,0,0,0:-1.87584,0,-18.3176,-3.68202,-18.6186,-21.9062,-3.68202,-18.6186,-21.9062,-21.9062,-3.68202,-18.6186,-21.9062,-21.9062,-21.9062,-3.68202,-18.6186,-21.9062,-21.9062,-21.9062,-21.9062,-3.68202,-18.6186,-21.9062,-21.9062,-21.9062,-21.9062,-21.9062 0|0:22:21,0,0,0,0,0,0:21:825:0,0,0,0,0,0:0,0,0,0,0,0:0,-6.32163,-74.2689,-6.32163,-74.2689,-74.2689,-6.32163,-74.2689,-74.2689,-74.2689,-6.32163,-74.2689,-74.2689,-74.2689,-74.2689,-6.32163,-74.2689,-74.2689,-74.2689,-74.2689,-74.2689,-6.32163,-74.2689,-74.2689,-74.2689,-74.2689,-74.2689,-74.2689 0|0:16:10,2,0,0,3,0,1:10:387:2,0,0,3,0,1:80,0,0,62,0,40:-3.63549,0,-31.2973,-6.64579,-31.8994,-38.4966,-6.64579,-31.8994,-38.4966,-38.4966,-2.87914,-28.0666,-34.6586,-34.6586,-33.7555,-6.64579,-31.8994,-38.4966,-38.4966,-34.6586,-38.4966,-3.32846,-28.5999,-35.1982,-35.1982,-31.3627,-35.1982,-34.8972 0|1:20:0,0,0,7,0,11,0:0:0:0,0,7,0,11,0:0,0,276,0,362,0:-50.1804,-50.1804,-50.1804,-50.1804,-50.1804,-50.1804,-29.1391,-29.1391,-29.1391,-27.0319,-50.1804,-50.1804,-50.1804,-29.1391,-50.1804,-21.072,-21.072,-21.072,0,-21.072,-17.7606,-50.1804,-50.1804,-50.1804,-29.1391,-50.1804,-21.072,-50.1804 0|0:26:5,2,8,6,0,3,2:5:191:2,8,6,0,3,2:81,299,219,0,99,80:-25.0994,-19.9217,-34.9939,-2.11894,-11.1106,-15.3857,-8.80917,-17.8,0,-22.6763,-26.6045,-35.5959,-17.7939,-24.4825,-42.2778,-18.6427,-27.633,-9.83374,-16.5219,-34.3148,-33.4117,-20.0112,-29.003,-11.2002,-17.8895,-35.6853,-27.7225,-35.0833 dDocent_Contig_9733 13 . G A 871.993 . AB=0.309091;ABP=37.8328;AC=2;AF=0.166667;AN=12;AO=34;CIGAR=1X;DP=355;DPB=355;DPRA=0.897959;EPP=76.8404;EPPR=687.051;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=59.8401;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.978056;PAO=0;PQA=0;PQR=0;PRO=0;QA=1363;QR=12698;RO=319;RPL=0;RPP=76.8404;RPPR=695.71;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=318;SRP=687.051;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:64:64,0:64:2563:0:0:0,-19.2659,-230.805 0/0:65:65,0:65:2569:0:0:0,-19.5669,-231.349 0/0:63:63,0:63:2521:0:0:0,-18.9649,-227.027 0/0:53:53,0:53:2085:0:0:0,-15.9546,-187.836 0/1:49:26,21:26:1043:21:834:-60.8277,0,-79.6124 0/1:61:48,13:48:1917:13:529:-29.5934,0,-152.023 dDocent_Contig_9734 25 . G T 7304.52 . AB=0.106061;ABP=447.833;AC=0;AF=0;AN=12;AO=35;CIGAR=1X3M1X4M;DP=514;DPB=514;DPRA=0;EPP=79.0118;EPPR=487.249;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1389;QR=8571;RO=223;RPL=0;RPP=79.0118;RPPR=487.249;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=223;SRP=487.249;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:42:8,0,0,34:8:292:0,0,34:0,0,1357:-109.748,-112.156,-136.002,-112.156,-136.002,-136.002,0,-24.2172,-24.2172,-13.9822 0|0:119:51,5,7,55:51:1950:5,7,55:203,268,2206:-166.407,-165.017,-323.505,-159.768,-303.016,-317.652,0,-143.249,-138,-143.437 0|0:59:10,0,1,48:10:387:0,1,48:0,39,1941:-157.031,-160.041,-191.828,-156.835,-188.623,-188.322,0,-31.7874,-28.5812,-17.3379 0|0:83:47,0,0,36:47:1826:0,0,36:0,0,1433:-104.235,-118.384,-268.421,-118.384,-268.421,-268.421,0,-150.431,-150.431,-139.593 0|0:108:48,20,0,40:48:1856:20,0,40:793,0,1555:-113.307,-62.4794,-208.902,-127.756,-214.923,-280.198,0,-87.1604,-152.437,-140.396 0|0:103:59,10,0,34:59:2260:10,0,34:393,0,1323:-90.9465,-76.3818,-258.837,-108.707,-261.847,-294.172,0,-153.135,-185.461,-175.226 dDocent_Contig_9735 8 . A T 39.6778 . AB=0.119048;ABP=55.9529;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=177;DPB=177;DPRA=1.55556;EPP=13.8677;EPPR=376.504;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.77907;PAO=0;PQA=0;PQR=0;PRO=0;QA=194;QR=6593;RO=172;RPL=0;RPP=13.8677;RPPR=376.504;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=172;SRP=376.504;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:37,5:37:1424:5:194:-5.18958,0,-115.796 0/0:32:32,0:32:1212:0:0:0,-9.63296,-109.375 0/0:12:12,0:12:463:0:0:0,-3.61236,-42.0215 0/0:28:28,0:28:1085:0:0:0,-8.42884,-97.9542 0/0:42:42,0:42:1593:0:0:0,-12.6433,-143.639 0/0:21:21,0:21:816:0:0:0,-6.32163,-73.7651 dDocent_Contig_9736 27 . T C 313.674 . AB=0.237288;ABP=38.3795;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=260;DPB=260;DPRA=1.46766;EPP=33.4109;EPPR=537.193;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.571429;PAIREDR=0.581301;PAO=0;PQA=0;PQR=0;PRO=0;QA=559;QR=9791;RO=246;RPL=0;RPP=33.4109;RPPR=537.193;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=246;SRP=537.193;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:47:47,0:47:1867:0:0:0,-14.1484,-168.243 0/0:47:47,0:47:1891:0:0:0,-14.1484,-170.392 0/0:19:19,0:19:769:0:0:0,-5.71957,-69.5304 0/1:59:45,14:45:1797:14:559:-32.8903,0,-144.176 0/0:33:33,0:33:1281:0:0:0,-9.93399,-115.554 0/0:55:55,0:55:2186:0:0:0,-16.5566,-196.907 dDocent_Contig_9737 121 . A C 1716.12 . AB=0.435754;ABP=9.42767;AC=4;AF=0.333333;AN=12;AO=81;CIGAR=1X;DP=243;DPB=243;DPRA=0;EPP=178.9;EPPR=354.789;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2668;QR=5373;RO=162;RPL=0;RPP=178.9;RPPR=354.789;RPR=81;RUN=1;SAF=0;SAP=178.9;SAR=81;SRF=0;SRP=354.789;SRR=162;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:31,2:31:1069:2:68:0,-3.47611,-90.0615 0/0:31:30,1:30:950:1:28:0,-6.5322,-82.9897 0/1:23:11,12:11:377:12:385:-28.0363,0,-27.3368 0/1:37:25,12:25:824:12:397:-24.912,0,-63.3243 0/1:51:20,31:20:677:31:1035:-78.0995,0,-45.8951 0/1:68:45,23:45:1476:23:755:-47.7865,0,-112.65 dDocent_Contig_9738 10 . T C 162.004 . AB=0.15625;ABP=35.8538;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1M1X1M;DP=199;DPB=215.333;DPRA=0.989691;EPP=16.0391;EPPR=406.904;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.833333;PAIREDR=0.731183;PAO=0;PQA=0;PQR=0;PRO=0;QA=241;QR=7079;RO=186;RPL=0;RPP=16.0391;RPPR=406.904;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=186;SRP=406.904;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:29:29,0,0:29:1100:0,0:0,0:0,-8.72987,-99.2985,-8.72987,-99.2985,-99.2985 0|0:40:40,0,0:40:1538:0,0:0,0:0,-12.0412,-138.691,-12.0412,-138.691,-138.691 0|0:32:31,0,1:31:1173:0,1:0,40:0,-9.33193,-105.468,-5.63728,-102.172,-101.871 0|1:32:27,0,5:27:1012:0,5:0,201:-8.83793,-16.9657,-99.8262,0,-83.2578,-81.7527 0|0:38:31,7,0:31:1192:7,0:241,0:-10.5844,0,-96.1354,-19.9163,-98.2426,-117.807 0|0:28:28,0,0:28:1064:0,0:0,0:0,-8.42884,-96.0656,-8.42884,-96.0656,-96.0656 dDocent_Contig_9739 10 . T A 126.42 . AB=0.129032;ABP=114.176;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=275;DPB=275;DPRA=1.02198;EPP=29.068;EPPR=574.108;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.596958;PAO=0;PQA=0;PQR=0;PRO=0;QA=479;QR=10016;RO=263;RPL=0;RPP=29.068;RPPR=574.108;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=263;SRP=574.108;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1592:0:0:0,-12.3422,-143.539 0/0:47:47,0:47:1759:0:0:0,-14.1484,-158.547 0/0:45:45,0:45:1726:0:0:0,-13.5463,-155.585 0/0:49:49,0:49:1832:0:0:0,-14.7505,-165.121 0/1:35:29,6:29:1096:6:236:-11.0753,0,-88.4014 0/1:58:52,6:52:2011:6:243:-4.78844,0,-163.758 dDocent_Contig_9740 1 . N G 73.1023 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=77;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:77:-7.30914,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_9741 14 . A T 67.6997 . AB=0.12069;ABP=75.4926;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=316;DPB=316;DPRA=1.12403;EPP=18.2106;EPPR=673.995;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.511327;PAO=0;PQA=0;PQR=0;PRO=0;QA=282;QR=12385;RO=309;RPL=0;RPP=18.2106;RPPR=673.995;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=309;SRP=673.995;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:47:47,0:47:1870:0:0:0,-14.1484,-168.512 0/0:61:61,0:61:2442:0:0:0,-18.3628,-219.925 0/0:41:41,0:41:1661:0:0:0,-12.3422,-149.712 0/0:65:65,0:65:2619:0:0:0,-19.5669,-235.832 0/0:44:44,0:44:1774:0:0:0,-13.2453,-159.871 0/1:58:51,7:51:2019:7:282:-8.29285,0,-164.439 dDocent_Contig_9742 17 . T A 787.367 . AB=0.386667;ABP=11.3777;AC=2;AF=0.166667;AN=12;AO=29;CIGAR=1X;DP=177;DPB=177;DPRA=1.47059;EPP=65.983;EPPR=324.388;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1154;QR=5932;RO=148;RPL=0;RPP=65.983;RPPR=324.388;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=148;SRP=324.388;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:40,0:40:1616:0:0:0,-12.0412,-145.669 0/0:17:17,0:17:677:0:0:0,-5.11751,-61.259 0/0:22:22,0:22:881:0:0:0,-6.62266,-79.5974 0/0:23:23,0:23:926:0:0:0,-6.92369,-83.6442 0/1:29:18,11:18:713:11:439:-31.1333,0,-55.7649 0/1:46:28,18:28:1119:18:715:-50.8252,0,-87.1455 dDocent_Contig_9743 14 . G C 69.003 . AB=0.122807;ABP=73.4498;AC=1;AF=0.1;AN=10;AO=8;CIGAR=1X;DP=278;DPB=278;DPRA=1.24342;EPP=20.3821;EPPR=589.308;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=320;QR=10718;RO=270;RPL=0;RPP=20.3821;RPPR=589.308;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=270;SRP=589.308;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:81:81,0:81:3241:0:0:0,-24.3834,-291.741 0/0:53:53,0:53:2100:0:0:0,-15.9546,-189.186 0/0:69:68,1:68:2663:1:39:0,-16.8745,-235.911 0/1:57:50,7:50:2002:7:281:-8.50236,0,-163.208 ./.:.:.:.:.:.:.:. 0/0:18:18,0:18:712:0:0:0,-5.41854,-64.4037 dDocent_Contig_9744 1 . N G 543.88 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=17;CIGAR=1X;DP=17;DPB=17;DPRA=0;EPP=39.9253;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=578;QR=0;RO=0;RPL=0;RPP=39.9253;RPPR=0;RPR=17;RUN=1;SAF=0;SAP=39.9253;SAR=17;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:4:0,4:0:0:4:139:-12.8527,-1.20412,0 1/1:2:0,2:0:0:2:60:-5.69857,-0.60206,0 1/1:4:0,4:0:0:4:140:-12.9449,-1.20412,0 ./.:.:.:.:.:.:.:. 1/1:6:0,6:0:0:6:204:-18.6934,-1.80618,0 dDocent_Contig_9745 10 . T C 314.607 . AB=0.241379;ABP=36.7056;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X1M1X1M1X;DP=184;DPB=184;DPRA=0.920635;EPP=33.4109;EPPR=363.475;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=562;QR=6239;RO=166;RPL=0;RPP=33.4109;RPPR=363.475;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=166;SRP=363.475;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:13:13,0,0:13:500:0,0:0,0:0,-3.91339,-45.3469,-3.91339,-45.3469,-45.3469 0|1:39:34,5,0:34:1306:5,0:200,0:-6.63975,0,-106.088,-16.8748,-107.593,-124.07 0|0:17:17,0,0:17:650:0,0:0,0:0,-5.11751,-58.8364,-5.11751,-58.8364,-58.8364 0|1:19:6,9,4:6:223:9,4:362,152:-28.0428,0,-15.5365,-17.3901,-5.77682,-34.4246 0|0:55:55,0,0:55:2027:0,0:0,0:0,-16.5566,-182.666,-16.5566,-182.666,-182.666 0|0:41:41,0,0:41:1533:0,0:0,0:0,-12.3422,-138.243,-12.3422,-138.243,-138.243 dDocent_Contig_9747 1 . N G 190.807 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=200;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:80:-7.59157,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:120:-11.1873,-0.90309,0 dDocent_Contig_9748 52 . C G 6886.91 . AB=0.275829;ABP=463.504;AC=6;AF=0.5;AN=12;AO=291;CIGAR=1X;DP=1055;DPB=1055;DPRA=0;EPP=634.909;EPPR=1662.02;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.926702;PAO=0;PQA=0;PQR=0;PRO=0;QA=11291;QR=30352;RO=764;RPL=291;RPP=634.909;RPPR=1662.02;RPR=0;RUN=1;SAF=291;SAP=634.909;SAR=0;SRF=764;SRP=1662.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:183:152,31:152:6053:31:1212:-54.273,0,-489.455 0/1:216:168,48:168:6629:48:1856:-102.242,0,-531.319 0/1:194:152,42:152:6027:42:1612:-86.9087,0,-483.826 0/1:266:182,84:182:7253:84:3289:-216.019,0,-572.356 0/1:75:45,30:45:1775:30:1179:-83.8154,0,-137.394 0/1:121:65,56:65:2615:56:2143:-156.654,0,-199.05 dDocent_Contig_9749 168 . N G 111.884 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=120;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:120:-11.1879,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_9750 37 . C T 2520.7 . AB=0.325301;ABP=91.0203;AC=6;AF=0.5;AN=12;AO=108;CIGAR=1X;DP=332;DPB=332;DPRA=0;EPP=237.529;EPPR=489.42;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.601852;PAIREDR=0.683036;PAO=0;PQA=0;PQR=0;PRO=0;QA=4014;QR=8959;RO=224;RPL=0;RPP=237.529;RPPR=489.42;RPR=108;RUN=1;SAF=108;SAP=237.529;SAR=0;SRF=224;SRP=489.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:50:39,11:39:1574:11:406:-21.835,0,-126.843 0/1:64:53,11:53:2094:11:420:-18.8865,0,-169.375 0/1:46:30,16:30:1199:16:597:-40.2183,0,-94.3368 0/1:85:49,36:49:1954:36:1346:-95.8372,0,-150.469 0/1:46:26,20:26:1044:20:741:-53.1661,0,-80.3991 0/1:41:27,14:27:1094:14:504:-33.3486,0,-86.4 dDocent_Contig_9751 98 . N T 164.078 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=166;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 1/1:3:0,3:0:0:3:100:-9.33066,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_9752 34 . A G 673.92 . AB=0.0555556;ABP=95.6598;AC=0;AF=0;AN=12;AO=3;CIGAR=2M1X5M;DP=323;DPB=357.75;DPRA=1.00935;EPP=9.52472;EPPR=548.05;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0.333333;PAIREDR=0.577689;PAO=0;PQA=0;PQR=0;PRO=0;QA=122;QR=9774;RO=251;RPL=0;RPP=9.52472;RPPR=548.05;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=251;SRP=548.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:62:46,8,0,7,0:46:1784:8,0,7,0:306,0,273,0:-11.2577,0,-144.148,-25.1051,-146.556,-171.665,-2.66298,-124.116,-149.225,-147.118,-25.1051,-146.556,-171.665,-149.225,-171.665 0|0:54:31,4,3,7,8:31:1211:4,3,7,8:157,122,285,318:-16.8503,-13.7601,-112.109,-16.117,-103.249,-114.77,-2.66572,-89.8004,-92.1602,-100.117,0,-87.1323,-89.492,-76.0429,-97.1481 0|0:34:30,0,0,3,0:30:1179:0,0,3,0:0,0,123,0:-1.23345,-10.2643,-107.255,-10.2643,-107.255,-107.255,0,-97.1008,-97.1008,-96.1977,-10.2643,-107.255,-107.255,-97.1008,-107.255 0|0:66:38,8,0,17,3:38:1476:8,0,17,3:313,0,679,116:-44.4934,-30.6877,-149.551,-55.9325,-151.959,-177.207,0,-96.0317,-121.28,-116.162,-46.4058,-142.432,-167.679,-111.752,-166.776 0|0:51:50,0,0,0,1:50:1927:0,0,0,1:0,0,0,40:0,-15.0515,-173.256,-15.0515,-173.256,-173.256,-15.0515,-173.256,-173.256,-173.256,-11.3569,-169.961,-169.961,-169.961,-169.66 0|0:56:56,0,0,0,0:56:2197:0,0,0,0:0,0,0,0:0,-16.8577,-197.933,-16.8577,-197.933,-197.933,-16.8577,-197.933,-197.933,-197.933,-16.8577,-197.933,-197.933,-197.933,-197.933 dDocent_Contig_9753 7 . A T 183.363 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=5;CIGAR=1X;DP=252;DPB=252;DPRA=0.101215;EPP=13.8677;EPPR=539.364;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995951;PAO=0;PQA=0;PQR=0;PRO=0;QA=191;QR=9386;RO=247;RPL=0;RPP=13.8677;RPPR=539.364;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=247;SRP=539.364;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:5:0,5:0:0:5:191:-17.5581,-1.50515,0 0/0:51:51,0:51:1945:0:0:0,-15.3525,-175.294 0/0:8:8,0:8:309:0:0:0,-2.40824,-28.173 0/0:15:15,0:15:571:0:0:0,-4.51545,-51.7313 0/0:45:45,0:45:1699:0:0:0,-13.5463,-153.168 0/0:128:128,0:128:4862:0:0:0,-38.5318,-437.62 dDocent_Contig_9754 10 . G A 7306.56 . AB=0.0224299;ABP=1062.86;AC=0;AF=0;AN=12;AO=12;CIGAR=1M1X2M3D1X2M2I4M;DP=852;DPB=813.643;DPRA=0;EPP=29.068;EPPR=719.596;GTI=0;LEN=1;MEANALT=12.25;MQM=6;MQMR=60;NS=6;NUMALT=6;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=72;QR=12468;RO=330;RPL=0;RPP=29.068;RPPR=719.596;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=330;SRP=719.596;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:133:63,2,1,0,43,0,10:63:2369:2,1,0,43,0,10:42,6,0,1612,0,363:-113.15,-129.48,-322.986,-132.099,-323.57,-325.906,-132.115,-323.588,-326.207,-326.225,0,-191.546,-194.164,-194.181,-181.237,-132.115,-323.588,-326.207,-326.225,-194.181,-326.225,-102.468,-293.947,-296.566,-296.584,-164.538,-296.584,-293.573 0|0:138:27,10,0,16,57,0,15:27:1033:10,0,16,57,0,15:231,0,357,2061,0,567:-160.146,-153.202,-234.973,-168.274,-237.983,-253.056,-145.294,-215.003,-230.073,-225.257,0,-69.7423,-84.8114,-61.8369,-67.6527,-168.274,-237.983,-253.056,-230.073,-84.8114,-253.056,-121.788,-191.502,-206.574,-183.593,-38.3174,-206.574,-202.059 0|0:179:79,6,0,4,58,0,17:79:2959:6,0,4,58,0,17:154,0,68,2149,0,629:-152.102,-165.457,-406.004,-175.884,-407.811,-418.239,-172.043,-403.968,-414.396,-413.192,0,-231.984,-242.411,-238.57,-224.951,-175.884,-407.811,-418.239,-414.396,-242.411,-418.239,-124.422,-356.357,-366.785,-362.942,-190.954,-366.785,-361.668 0|0:201:84,5,2,5,60,0,19:84:3163:5,2,5,60,0,19:99,12,101,2200,0,706:-154.586,-173.816,-431.506,-179.837,-432.973,-438.429,-173.635,-426.772,-432.792,-431.325,0,-253.192,-259.212,-253.011,-241.187,-179.873,-433.011,-439.032,-432.83,-259.249,-439.07,-122.087,-375.235,-381.255,-375.054,-201.468,-381.293,-375.573 0|0:96:26,0,3,1,45,13,1:26:1004:0,3,1,45,13,1:0,18,23,1649,447,32:-127.014,-134.841,-217.316,-134.793,-217.264,-216.361,-133.344,-215.818,-215.767,-215.517,0,-82.5267,-82.483,-81.0301,-68.9804,-98.5391,-181.018,-180.968,-179.52,-46.2207,-177.104,-132.263,-214.738,-214.686,-213.24,-79.9484,-178.44,-214.437 0|0:105:51,0,6,3,17,16,0:51:1940:0,6,3,17,16,0:0,36,69,615,554,0:-34.8788,-50.2313,-209.383,-50.1401,-209.278,-207.472,-45.7395,-204.89,-204.786,-203.987,0,-159.18,-159.078,-154.687,-154.062,-5.19094,-164.365,-164.263,-159.872,-114.159,-159.548,-50.2313,-209.383,-209.278,-204.89,-159.18,-164.365,-209.383 dDocent_Contig_9755 23 . C A 671.877 . AB=0.242188;ABP=76.9082;AC=3;AF=0.25;AN=12;AO=33;CIGAR=1X;DP=181;DPB=181;DPRA=3.42;EPP=74.6689;EPPR=322.217;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1304;QR=5697;RO=147;RPL=0;RPP=74.6689;RPPR=322.217;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=147;SRP=322.217;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:32,4:32:1237:4:158:-3.76289,0,-100.761 0/1:54:34,20:34:1320:20:782:-54.4395,0,-102.81 0/0:19:18,1:18:713:1:41:0,-1.625,-60.4039 0/1:38:30,7:30:1163:7:282:-14.2059,0,-93.4059 0/0:10:10,0:10:398:0:0:0,-3.0103,-36.1784 0/0:24:23,1:23:866:1:41:0,-3.13015,-74.137 dDocent_Contig_9756 18 . T C 66.6341 . AB=0.190476;ABP=20.4855;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=154;DPB=154;DPRA=1.94872;EPP=13.8677;EPPR=326.56;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.986577;PAO=0;PQA=0;PQR=0;PRO=0;QA=189;QR=5939;RO=149;RPL=0;RPP=13.8677;RPPR=326.56;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=149;SRP=326.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:729:0:0:0,-5.41854,-65.9349 0/1:21:17,4:17:673:4:157:-8.18629,0,-54.5779 0/0:55:54,1:54:2152:1:32:0,-13.3573,-190.658 0/0:11:11,0:11:441:0:0:0,-3.31133,-40.043 0/0:19:19,0:19:766:0:0:0,-5.71957,-69.2603 0/0:30:30,0:30:1178:0:0:0,-9.0309,-106.302 dDocent_Contig_9757 8 . A G 1136.3 . AB=0.08;ABP=41.3151;AC=0;AF=0;AN=12;AO=2;CIGAR=1X3M1X;DP=113;DPB=113;DPRA=2.5;EPP=7.35324;EPPR=137.642;GTI=0;LEN=1;MEANALT=2;MQM=12;MQMR=60;NS=6;NUMALT=2;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=2367;RO=62;RPL=0;RPP=7.35324;RPPR=137.642;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=62;SRP=137.642;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:10:0,0,10:0:0:0,10:0,395:-32.8875,-32.8875,-32.8875,-3.0103,-3.0103,0 0|0:18:8,0,10:8:305:0,10:0,396:-26.7958,-29.2041,-54.2359,0,-25.4008,-22.3905 0|0:10:5,0,5:5:175:0,5:0,201:-12.3406,-13.8457,-28.0865,0,-14.5825,-13.0774 0|0:25:8,2,15:8:304:2,15:81,608:-39.7897,-40.6675,-65.008,0,-23.6332,-20.6227 0|0:26:23,0,2:23:881:0,2:0,82:-0.0370496,-6.96074,-79.3222,0,-72.5512,-71.9491 0|0:24:18,0,5:18:702:0,5:0,196:-9.03727,-14.4558,-72.1812,0,-57.6959,-56.1908 dDocent_Contig_9758 51 . A T 854.667 . AB=0.18677;ABP=222.025;AC=4;AF=0.333333;AN=12;AO=49;CIGAR=1X2M1X;DP=340;DPB=340;DPRA=1.24681;EPP=109.412;EPPR=624.051;GTI=0;LEN=1;MEANALT=1.8;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.367347;PAIREDR=0.437063;PAO=0;PQA=0;PQR=0;PRO=0;QA=1909;QR=11120;RO=286;RPL=49;RPP=109.412;RPPR=624.051;RPR=0;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=286;SRP=624.051;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:47:47,0,0:47:1826:0,0:0,0:0,-14.1484,-164.568,-14.1484,-164.568,-164.568 0|1:85:72,12,1:72:2755:12,1:469,41:-16.8635,0,-222.414,-35.1521,-222.642,-260.897 0|0:36:35,1,0:35:1384:1,0:37,0:0,-7.13925,-121.126,-10.536,-121.427,-124.453 0|1:51:42,8,1:42:1649:8,1:321,8:-14.0913,0,-133.505,-26.3513,-135.501,-161.651 0|1:38:30,6,2:30:1139:6,2:238,82:-10.5511,0,-91.5516,-12.8106,-86.5877,-105.58 0|1:83:60,22,1:60:2367:22,1:844,40:-51.1826,0,-188.117,-65.9486,-191.444,-260.4 dDocent_Contig_9759 66 . G A 1427.36 . AB=0.337278;ABP=41.8784;AC=6;AF=0.5;AN=12;AO=57;CIGAR=1X;DP=169;DPB=169;DPRA=0;EPP=126.784;EPPR=246.215;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.912281;PAIREDR=0.910714;PAO=0;PQA=0;PQR=0;PRO=0;QA=2252;QR=4434;RO=112;RPL=57;RPP=126.784;RPPR=246.215;RPR=0;RUN=1;SAF=57;SAP=126.784;SAR=0;SRF=112;SRP=246.215;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:8,12:8:324:12:472:-36.8106,0,-23.5082 0/1:33:29,4:29:1125:4:162:-5.03297,0,-91.606 0/1:31:17,14:17:679:14:560:-41.4113,0,-52.108 0/1:39:33,6:33:1295:6:231:-9.41542,0,-105.073 0/1:14:5,9:5:203:9:364:-28.9103,0,-14.4386 0/1:32:20,12:20:808:12:463:-32.3768,0,-63.404 dDocent_Contig_9760 30 . T G 193.5 . AB=0.219512;ABP=31.0276;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=176;DPB=176;DPRA=1.11504;EPP=24.725;EPPR=363.475;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.740964;PAO=0;PQA=0;PQR=0;PRO=0;QA=406;QR=6609;RO=166;RPL=0;RPP=24.725;RPPR=363.475;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=166;SRP=363.475;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1074:0:0:0,-8.42884,-96.9357 0/1:41:32,9:32:1282:9:365:-20.8728,0,-103.305 0/0:29:29,0:29:1146:0:0:0,-8.72987,-103.415 0/0:35:35,0:35:1413:0:0:0,-10.536,-127.422 0/0:21:21,0:21:847:0:0:0,-6.32163,-76.5425 0/0:22:21,1:21:847:1:41:0,-2.52809,-72.4479 dDocent_Contig_9761 53 . G C 1694.57 . AB=0.29798;ABP=73.1993;AC=3;AF=0.25;AN=12;AO=59;CIGAR=1M2X9M;DP=288;DPB=285.417;DPRA=0.933962;EPP=131.127;EPPR=415.59;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0.169492;PAIREDR=0.689474;PAO=0;PQA=0;PQR=0;PRO=0;QA=2296;QR=6937;RO=190;RPL=53;RPP=84.3117;RPPR=3.19316;RPR=6;RUN=1;SAF=53;SAP=84.3117;SAR=6;SRF=93;SRP=3.19316;SRR=97;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:63:35,11,17,0,0:35:1279:11,17,0,0:385,685,0,0:-45.9562,-25.1937,-126.363,0,-73.2024,-99.4004,-56.4922,-129.675,-104.518,-160.989,-56.4922,-129.675,-104.518,-160.989,-160.989 0|0:45:30,0,3,0,10:30:1105:0,3,0,10:0,120,0,376:-21.7633,-30.7942,-121.137,-20.9043,-111.249,-110.346,-30.7942,-121.137,-111.249,-121.137,0,-90.3309,-80.443,-90.3309,-87.3206 0|1:30:22,0,8,0,0:22:807:0,8,0,0:0,285,0,0:-16.9534,-23.5761,-89.5471,0,-66.3298,-63.9216,-23.5761,-89.5471,-66.3298,-89.5471,-23.5761,-89.5471,-66.3298,-89.5471,-89.5471 0|1:60:28,0,31,0,0:28:1029:0,31,0,0:0,1206,0,0:-90.9648,-99.3937,-183.505,0,-84.3945,-75.0626,-99.3937,-183.505,-84.3945,-183.505,-99.3937,-183.505,-84.3945,-183.505,-183.505 0|0:37:31,4,0,0,2:31:1127:4,0,0,2:151,0,0,78:-3.03496,0,-90.8088,-12.3669,-92.0129,-104.389,-12.3669,-92.0129,-104.389,-104.389,-5.95165,-85.6002,-97.977,-97.977,-97.3749 0|0:53:44,2,0,4,0:44:1590:2,0,4,0:70,0,137,0:0,-7.55231,-136.723,-13.2453,-137.326,-143.019,-2.13224,-126.206,-131.899,-130.695,-13.2453,-137.326,-143.019,-131.899,-143.019 dDocent_Contig_9762 40 . G T 53.7534 . AB=0.227273;ABP=17.2236;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=184;DPB=184;DPRA=0.614035;EPP=18.2106;EPPR=383.018;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.571429;PAIREDR=0.457143;PAO=0;PQA=0;PQR=0;PRO=0;QA=213;QR=6707;RO=175;RPL=0;RPP=18.2106;RPPR=383.018;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=175;SRP=383.018;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:13,1:13:462:1:33:0,-0.915285,-38.6051 0/0:34:33,0:33:1234:0:0:0,-9.93399,-110.946 0/0:41:41,0:41:1642:0:0:0,-12.3422,-148.009 0/0:39:38,0:38:1489:0:0:0,-11.4391,-133.996 0/1:22:17,5:17:639:5:147:-6.89813,0,-51.2086 0/0:34:33,1:33:1241:1:33:0,-6.93588,-108.657 dDocent_Contig_9763 12 . C G 252.747 . AB=0.136364;ABP=179.887;AC=2;AF=0.166667;AN=12;AO=21;CIGAR=1X;DP=378;DPB=378;DPRA=1.375;EPP=48.6112;EPPR=778.226;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997199;PAO=0;PQA=0;PQR=0;PRO=0;QA=824;QR=14270;RO=357;RPL=0;RPP=48.6112;RPPR=778.226;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=357;SRP=778.226;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:27:20,7:20:784:7:266:-16.1676,0,-62.7506 0/1:127:113,14:113:4516:14:558:-12.329,0,-368.142 0/0:63:63,0:63:2514:0:0:0,-18.9649,-226.398 0/0:62:62,0:62:2489:0:0:0,-18.6639,-224.146 0/0:38:38,0:38:1517:0:0:0,-11.4391,-136.773 0/0:61:61,0:61:2450:0:0:0,-18.3628,-220.641 dDocent_Contig_9764 57 . G T 92.3503 . AB=0.145833;ABP=55.3066;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=298;DPB=298;DPRA=0.96;EPP=18.2106;EPPR=634.909;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.714286;PAIREDR=0.560137;PAO=0;PQA=0;PQR=0;PRO=0;QA=276;QR=11381;RO=291;RPL=7;RPP=18.2106;RPPR=634.909;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=291;SRP=634.909;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:36,0:36:1389:0:0:0,-10.8371,-125.266 0/1:48:41,7:41:1615:7:276:-10.7579,0,-131.142 0/0:52:52,0:52:2027:0:0:0,-15.6536,-182.625 0/0:60:60,0:60:2324:0:0:0,-18.0618,-209.335 0/0:47:47,0:47:1866:0:0:0,-14.1484,-168.153 0/0:55:55,0:55:2160:0:0:0,-16.5566,-194.586 dDocent_Contig_9765 9 . G T 1305.65 . AB=0.230216;ABP=178.759;AC=5;AF=0.416667;AN=12;AO=69;CIGAR=1X;DP=348;DPB=348;DPRA=0;EPP=152.842;EPPR=608.851;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2645;QR=10664;RO=279;RPL=0;RPP=152.842;RPPR=608.851;RPR=69;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=279;SRP=608.851;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:70:65,5:65:2475:5:195:0,-3.1479,-205.033 0/1:45:41,4:41:1576:4:155:-0.77909,0,-128.562 0/1:35:31,4:31:1173:4:156:-3.88124,0,-95.3241 0/1:55:48,7:48:1834:7:273:-8.38136,0,-148.753 0/1:71:37,34:37:1410:34:1301:-96.0061,0,-105.804 0/1:72:57,15:57:2196:15:565:-29.5131,0,-176.188 dDocent_Contig_9766 171 . G A 4449.12 . AB=0.435967;ABP=16.0806;AC=6;AF=0.5;AN=12;AO=164;CIGAR=1X1M1X;DP=379;DPB=379;DPRA=9.275;EPP=359.132;EPPR=454.677;GTI=0;LEN=1;MEANALT=1.6;MQM=59.878;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6223;QR=8091;RO=208;RPL=164;RPP=359.132;RPPR=454.677;RPR=0;RUN=1;SAF=0;SAP=359.132;SAR=164;SRF=0;SRP=454.677;SRR=208;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:49:24,24,1:24:938:24,1:885,40:-65.0971,0,-69.8732,-69.0255,-73.8024,-145.842 0|1:52:14,33,5:14:547:33,5:1275,195:-100.48,0,-35.0328,-88.6653,-28.9388,-132.128 0|1:139:72,66,0:72:2814:66,0:2459,0:-179.852,0,-211.757,-201.526,-231.625,-432.856 0|1:127:90,37,0:90:3472:37,0:1454,0:-92.8415,0,-274.332,-119.934,-285.47,-405.014 1|1:4:0,4,0:0:0:4,0:150,0:-13.8637,-1.20412,0,-13.8637,-1.20412,-13.8637 0|0:8:8,0,0:8:320:0,0:0,0:0,-2.40824,-29.1674,-2.40824,-29.1674,-29.1674 dDocent_Contig_9767 135 . G A 992.296 . AB=0.221402;ABP=185.71;AC=5;AF=0.416667;AN=12;AO=62;CIGAR=1X;DP=312;DPB=312;DPRA=0;EPP=137.642;EPPR=545.878;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2161;QR=9184;RO=250;RPL=0;RPP=137.642;RPPR=545.878;RPR=62;RUN=1;SAF=0;SAP=137.642;SAR=62;SRF=0;SRP=545.878;SRR=250;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:22,4:22:798:4:140:-5.11801,0,-64.3079 0/0:41:39,2:39:1463:2:68:0,-5.8843,-125.486 0/1:104:86,18:86:3157:18:640:-26.6227,0,-253.015 0/1:61:41,20:41:1535:20:679:-43.0611,0,-120.064 0/1:45:37,8:37:1339:8:270:-11.0793,0,-107.26 0/1:35:25,10:25:892:10:364:-22.5703,0,-70.0598 dDocent_Contig_9768 15 . T A 496.187 . AB=0.714286;ABP=5.80219;AC=8;AF=0.666667;AN=12;AO=13;CIGAR=1X2M;DP=19;DPB=19;DPRA=1.875;EPP=31.2394;EPPR=11.6962;GTI=0;LEN=1;MEANALT=1;MQM=55.9231;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.384615;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=509;QR=149;RO=4;RPL=0;RPP=31.2394;RPPR=11.6962;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=4;SRP=11.6962;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:3:1,0,2:1:38:0,2:0,82:-6.86644,-7.16747,-10.2743,0,-3.49624,-2.89418 1|1:2:0,0,2:0:0:0,2:0,80:-7.53693,-7.53693,-7.53693,-0.60206,-0.60206,0 1|1:2:0,2,0:0:0:2,0:81,0:-7.68573,-0.60206,0,-7.68573,-0.60206,-7.68573 1|1:6:0,0,6:0:0:0,6:0,230:-20.967,-20.967,-20.967,-1.80618,-1.80618,0 0|1:4:1,0,3:1:32:0,3:0,117:-9.70446,-10.0055,-12.5664,0,-2.89828,-1.99519 0|0:2:2,0,0:2:79:0,0:0,0:0,-0.60206,-7.49763,-0.60206,-7.49763,-7.49763 dDocent_Contig_9769 10 . C T 58.1034 . AB=0.5;ABP=3.0103;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=225;DPB=225;DPRA=0.136986;EPP=9.52472;EPPR=485.077;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.797297;PAO=0;PQA=0;PQR=0;PRO=0;QA=98;QR=8843;RO=222;RPL=0;RPP=9.52472;RPPR=485.077;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=222;SRP=485.077;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:51:51,0:51:2024:0:0:0,-15.3525,-182.353 0/0:59:59,0:59:2345:0:0:0,-17.7608,-211.211 0/0:16:16,0:16:644:0:0:0,-4.81648,-58.2923 0/0:29:29,0:29:1163:0:0:0,-8.72987,-104.948 0/0:64:64,0:64:2544:0:0:0,-19.2659,-229.1 0/1:6:3,3:3:123:3:98:-7.33322,0,-9.65861 dDocent_Contig_9770 30 . A G 1845.02 . AB=0.392857;ABP=19.7617;AC=2;AF=0.166667;AN=12;AO=66;CIGAR=1X;DP=469;DPB=469;DPRA=1.11628;EPP=146.327;EPPR=878.114;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2642;QR=15886;RO=403;RPL=0;RPP=146.327;RPPR=878.114;RPR=66;RUN=1;SAF=66;SAP=146.327;SAR=0;SRF=403;SRP=878.114;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:74:56,18:56:2178:18:717:-42.5762,0,-173.923 0/0:128:128,0:128:5012:0:0:0,-38.5318,-450.976 0/0:117:117,0:117:4652:0:0:0,-35.2205,-418.584 0/1:94:46,48:46:1840:48:1925:-145.148,0,-137.506 0/0:15:15,0:15:590:0:0:0,-4.51545,-53.4351 0/0:41:41,0:41:1614:0:0:0,-12.3422,-145.495 dDocent_Contig_9771 9 . G C 190.085 . AB=0.232558;ABP=29.7245;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=104;DPB=104;DPRA=1.40984;EPP=24.725;EPPR=204.957;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.709677;PAO=0;PQA=0;PQR=0;PRO=0;QA=383;QR=3581;RO=93;RPL=0;RPP=24.725;RPPR=204.957;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=93;SRP=204.957;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:347:0:0:0,-2.70927,-31.5893 0/0:26:26,0:26:998:0:0:0,-7.82678,-90.1302 0/0:16:16,0:16:618:0:0:0,-4.81648,-55.9596 0/0:10:10,0:10:385:0:0:0,-3.0103,-35.0063 0/1:23:16,6:16:619:6:227:-13.8337,0,-49.0941 0/1:20:16,4:16:614:4:156:-8.39669,0,-49.5788 dDocent_Contig_9772 22 . G T 444.822 . AB=0.516129;ABP=3.08035;AC=1;AF=0.1;AN=10;AO=45;CIGAR=1X;DP=648;DPB=648;DPRA=0.572335;EPP=100.727;EPPR=1310.24;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998339;PAO=0;PQA=0;PQR=0;PRO=0;QA=1691;QR=23124;RO=602;RPL=0;RPP=100.727;RPPR=1310.24;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=602;SRP=1310.24;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:197:197,0:197:7539:0:0:0,-59.3029,-678.283 0/0:171:158,13:158:6074:13:446:0,-11.0288,-506.103 0/0:127:116,10:116:4459:10:394:0,-2.37368,-365.513 0/0:122:116,6:116:4478:6:239:0,-14.8405,-381.144 ./.:.:.:.:.:.:.:. 0/1:31:15,16:15:574:16:612:-46.0842,0,-42.665 dDocent_Contig_9773 18 . T C 124.162 . AB=0.163636;ABP=57.0602;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=279;DPB=279;DPRA=1.22768;EPP=22.5536;EPPR=589.308;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.7778;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.788889;PAO=0;PQA=0;PQR=0;PRO=0;QA=335;QR=10330;RO=270;RPL=0;RPP=22.5536;RPPR=589.308;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=270;SRP=589.308;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1161:0:0:0,-9.0309,-104.783 0/0:47:47,0:47:1797:0:0:0,-14.1484,-161.963 0/0:52:52,0:52:1996:0:0:0,-15.6536,-179.86 0/0:41:41,0:41:1555:0:0:0,-12.3422,-140.085 0/1:55:46,9:46:1748:9:335:-13.9391,0,-141.006 0/0:54:54,0:54:2073:0:0:0,-16.2556,-186.794 dDocent_Contig_9774 14 . A G 59.6297 . AB=0.105263;ABP=157.299;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=338;DPB=338;DPRA=33.6;EPP=4.74748;EPPR=667.727;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.981132;PAO=0;PQA=0;PQR=0;PRO=0;QA=788;QR=12726;RO=318;RPL=0;RPP=46.4397;RPPR=693.539;RPR=20;RUN=1;SAF=12;SAP=4.74748;SAR=8;SRF=315;SRP=667.727;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:45:39,6:39:1569:6:226:-7.15283,0,-127.899 0/1:69:63,6:63:2545:6:245:-1.6584,0,-208.405 0/0:54:50,4:50:1995:4:153:0,-2.1165,-165.601 0/0:2:2,0:2:80:0:0:0,-0.60206,-7.59157 0/0:30:28,2:28:1126:2:82:0,-1.25122,-93.8432 0/0:138:136,2:136:5411:2:82:0,-33.7625,-479.052 dDocent_Contig_9775 29 . C T 536.444 . AB=0.184049;ABP=144.343;AC=4;AF=0.333333;AN=12;AO=30;CIGAR=1X;DP=202;DPB=202;DPRA=2.08974;EPP=68.1545;EPPR=376.504;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.266667;PAIREDR=0.44186;PAO=0;PQA=0;PQR=0;PRO=0;QA=1188;QR=6885;RO=172;RPL=0;RPP=68.1545;RPPR=376.504;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=172;SRP=376.504;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:46:38,8:38:1531:8:324:-15.6818,0,-124.181 0/1:36:33,3:33:1328:3:121:-0.443117,0,-108.944 0/0:20:20,0:20:791:0:0:0,-6.0206,-71.5068 0/1:55:41,14:41:1636:14:555:-33.7304,0,-130.905 0/0:19:19,0:19:757:0:0:0,-5.71957,-68.4511 0/1:26:21,5:21:842:5:188:-9.4521,0,-68.2597 dDocent_Contig_9776 175 . A G 4548.47 . AB=0.529412;ABP=5.18177;AC=4;AF=0.333333;AN=12;AO=153;CIGAR=1X;DP=435;DPB=435;DPRA=0.989726;EPP=335.246;EPPR=615.366;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6087;QR=10678;RO=282;RPL=153;RPP=335.246;RPPR=615.366;RPR=0;RUN=1;SAF=0;SAP=335.246;SAR=153;SRF=0;SRP=615.366;SRR=282;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:5,49:5:196:49:1961:-160.426,0,-1.75939 0/1:57:27,30:27:1036:30:1195:-90.6637,0,-76.3808 0/1:43:18,25:18:703:25:984:-75.9112,0,-50.6559 0/1:135:86,49:86:3225:49:1947:-134.787,0,-249.762 0/0:87:87,0:87:3290:0:0:0,-26.1896,-296.249 0/0:59:59,0:59:2228:0:0:0,-17.7608,-200.742 dDocent_Contig_9777 34 . A T 345.059 . AB=0.253521;ABP=40.4758;AC=2;AF=0.166667;AN=12;AO=21;CIGAR=1X;DP=243;DPB=243;DPRA=0.981707;EPP=48.6112;EPPR=485.077;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.761905;PAIREDR=0.554054;PAO=0;PQA=0;PQR=0;PRO=0;QA=758;QR=8585;RO=222;RPL=0;RPP=48.6112;RPPR=485.077;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=222;SRP=485.077;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:27,11:27:1014:11:386:-23.6333,0,-80.1154 0/1:33:26,7:26:1005:7:263:-14.0945,0,-80.8179 0/0:38:36,2:36:1363:2:71:0,-4.69724,-116.183 0/0:52:51,1:51:1958:1:38:0,-11.8563,-172.641 0/0:36:36,0:36:1436:0:0:0,-10.8371,-129.496 0/0:46:46,0:46:1809:0:0:0,-13.8474,-163.037 dDocent_Contig_9778 18 . T A 225.078 . AB=0.107595;ABP=425.65;AC=3;AF=0.25;AN=12;AO=41;CIGAR=1X;DP=1097;DPB=1097;DPRA=0.331061;EPP=92.0407;EPPR=2293.91;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=58.7953;NS=6;NUMALT=1;ODDS=0;PAIRED=0.829268;PAIREDR=0.898578;PAO=0;PQA=0;PQR=0;PRO=0;QA=1615;QR=40870;RO=1055;RPL=0;RPP=92.0407;RPPR=2293.91;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=1055;SRP=2293.91;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:55:48,7:48:1857:7:273:-8.38029,0,-145.321 0/0:121:114,7:114:4401:7:278:0,-11.0337,-365.824 0/1:128:117,11:117:4539:11:430:-0.520481,0,-369.249 0/1:133:116,16:116:4528:16:634:-17.3469,0,-364.28 0/0:361:361,0:361:13986:0:0:0,-108.672,-1248.57 0/0:299:299,0:299:11559:0:0:0,-90.008,-1032.39 dDocent_Contig_9779 32 . T A 4041.63 . AB=0.263427;ABP=193.084;AC=5;AF=0.416667;AN=12;AO=103;CIGAR=14M1X1M;DP=391;DPB=262.375;DPRA=0;EPP=226.672;EPPR=309.188;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4091;QR=5372;RO=141;RPL=0;RPP=226.672;RPPR=309.188;RPR=103;RUN=1;SAF=103;SAP=226.672;SAR=0;SRF=141;SRP=309.188;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:73:18,36,19:18:692:36,19:1154,759:-93.2271,-5.71777,-51.6846,-36.1044,0,-87.2173 0|1:108:24,59,25:24:908:59,25:1943,984:-156.284,-6.52249,-63.188,-82.549,0,-149.471 0|1:82:33,25,24:33:1247:25,24:829,952:-68.459,-11.3705,-106.044,0,-35.2009,-95.0119 0|1:52:23,11,18:23:879:11,18:369,730:-53.3211,-30.3875,-99.1884,0,-42.2881,-66.7383 0|1:43:22,9,12:22:853:9,12:310,467:-31.7791,-13.2411,-80.6116,0,-44.944,-66.4988 0|0:33:21,7,5:21:793:7,5:231,199:-12.3141,0,-62.8707,-2.22185,-48.5884,-65.7466 dDocent_Contig_9780 20 . C A 6311.15 . AB=0.340029;ABP=157.939;AC=4;AF=0.333333;AN=12;AO=244;CIGAR=1X;DP=894;DPB=894;DPRA=1.6433;EPP=532.85;EPPR=1414.47;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9702;QR=26011;RO=650;RPL=0;RPP=532.85;RPPR=1414.47;RPR=244;RUN=1;SAF=244;SAP=532.85;SAR=0;SRF=650;SRP=1414.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:115:84,31:84:3323:31:1250:-78.1515,0,-264.503 0/1:171:74,97:74:2983:97:3874:-297.187,0,-217.074 0/1:183:143,40:143:5675:40:1581:-87.4305,0,-455.466 0/1:228:159,69:159:6400:69:2712:-175.568,0,-507.068 0/0:97:97,0:97:3885:0:0:0,-29.1999,-349.635 0/0:100:93,7:93:3745:7:285:0,-4.0788,-311.027 dDocent_Contig_9781 60 . C G 753.723 . AB=0.128571;ABP=254.653;AC=1;AF=0.0833333;AN=12;AO=27;CIGAR=2X2M;DP=265;DPB=265;DPRA=0.763636;EPP=61.6401;EPPR=415.59;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.777778;PAIREDR=0.994737;PAO=0;PQA=0;PQR=0;PRO=0;QA=1032;QR=7460;RO=190;RPL=27;RPP=61.6401;RPPR=415.59;RPR=0;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=190;SRP=415.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:26:19,0,6,1:19:761:0,6,1:0,238,41:-13.8606,-19.5802,-82.2758,0,-62.6852,-60.8791,-16.1942,-78.8913,-59.3007,-78.5903 0|0:48:30,3,7,7:30:1174:3,7,7:108,277,278:-13.8613,-14.0876,-109.713,-0.0890264,-87.8182,-94.5184,0,-87.7298,-73.7389,-94.43 0|0:38:23,3,1,11:23:898:3,1,11:111,41,446:-29.8742,-27.725,-100.628,-33.413,-98.1467,-106.924,0,-64.7475,-70.4402,-70.5138 0|0:32:17,5,5,5:17:673:5,5,5:200,199,201:-11.4477,-0.0897819,-53.9711,-0.180553,-39.0905,-54.0613,0,-38.9111,-39.0013,-53.882 0|0:55:53,0,0,1:53:2071:0,0,1:0,0,21:0,-15.9546,-186.441,-15.9546,-186.441,-186.441,-14.3007,-184.855,-184.855,-184.554 0|0:66:48,0,8,9:48:1883:0,8,9:0,277,362:-15.4101,-29.8595,-184.722,-7.38055,-162.225,-159.817,0,-154.887,-132.39,-152.177 dDocent_Contig_9782 143 . A T 369.449 . AB=0.388889;ABP=4.9405;AC=3;AF=0.25;AN=12;AO=13;CIGAR=1X;DP=150;DPB=150;DPRA=0.351351;EPP=31.2394;EPPR=300.502;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=514;QR=4895;RO=137;RPL=0;RPP=31.2394;RPPR=300.502;RPR=13;RUN=1;SAF=0;SAP=31.2394;SAR=13;SRF=0;SRP=300.502;SRR=137;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:5:0,5:0:0:5:200:-18.3784,-1.50515,0 0/0:29:29,0:29:1036:0:0:0,-8.72987,-93.5361 0/1:18:11,7:11:387:7:276:-19.7882,0,-29.7375 0/0:16:15,1:15:520:1:38:0,-1.01921,-43.3227 0/0:59:59,0:59:2148:0:0:0,-17.7608,-193.558 0/0:23:23,0:23:804:0:0:0,-6.92369,-72.6622 dDocent_Contig_9783 32 . T A 55.5906 . AB=0.190476;ABP=20.4855;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=148;DPB=148;DPRA=0.826772;EPP=11.6962;EPPR=315.702;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.798611;PAO=0;PQA=0;PQR=0;PRO=0;QA=145;QR=5706;RO=144;RPL=0;RPP=11.6962;RPPR=315.702;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=144;SRP=315.702;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:745:0:0:0,-5.71957,-67.3676 0/0:25:25,0:25:965:0:0:0,-7.52575,-87.1473 0/0:12:12,0:12:476:0:0:0,-3.61236,-43.187 0/0:28:28,0:28:1110:0:0:0,-8.42884,-100.182 0/0:43:43,0:43:1724:0:0:0,-12.9443,-155.377 0/1:21:17,4:17:686:4:145:-7.08194,0,-55.7467 dDocent_Contig_9784 43 . T G 68.8461 . AB=0.12963;ABP=67.3502;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=424;DPB=424;DPRA=0.735484;EPP=24.725;EPPR=902;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.5;PAIREDR=0.60628;PAO=0;PQA=0;PQR=0;PRO=0;QA=393;QR=16260;RO=414;RPL=0;RPP=24.725;RPPR=902;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=414;SRP=902;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:61:61,0:61:2381:0:0:0,-18.3628,-214.442 0/0:60:57,3:57:2232:3:123:0,-6.59701,-189.587 0/1:54:47,7:47:1832:7:270:-8.40749,0,-148.832 0/0:72:72,0:72:2843:0:0:0,-21.6742,-255.985 0/0:85:85,0:85:3335:0:0:0,-25.5875,-300.218 0/0:92:92,0:92:3637:0:0:0,-27.6948,-327.37 dDocent_Contig_9785 16 . G A 154.297 . AB=0.1;ABP=531.112;AC=2;AF=0.166667;AN=12;AO=51;CIGAR=1X;DP=1079;DPB=1079;DPRA=1.22917;EPP=113.755;EPPR=2235.28;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1972;QR=39560;RO=1028;RPL=0;RPP=113.755;RPPR=2235.28;RPR=51;RUN=1;SAF=51;SAP=113.755;SAR=0;SRF=1028;SRP=2235.28;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:139:125,14:125:4774:14:544:-7.46169,0,-387.852 0/0:154:143,11:143:5417:11:423:0,-7.93554,-449.099 0/0:233:231,2:231:8874:2:78:0,-62.7365,-790.873 0/1:241:217,24:217:8342:24:927:-11.1899,0,-677.891 0/0:142:142,0:142:5535:0:0:0,-42.7463,-498.041 0/0:170:170,0:170:6618:0:0:0,-51.1751,-595.425 dDocent_Contig_9786 17 . T C 19056.2 . AB=0.783354;ABP=572.773;AC=6;AF=0.5;AN=12;AO=640;CIGAR=1X;DP=817;DPB=817;DPRA=0;EPP=1392.75;EPPR=380.846;GTI=0;LEN=1;MEANALT=1.33333;MQM=46.2547;MQMR=59.9253;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.844828;PAO=0;PQA=0;PQR=0;PRO=0;QA=25561;QR=6951;RO=174;RPL=0;RPP=1392.75;RPPR=380.846;RPR=640;RUN=1;SAF=640;SAP=1392.75;SAR=0;SRF=174;SRP=380.846;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:117:26,91:26:1039:91:3599:-266.163,0,-58.5809 0/1:179:28,150:28:1118:150:6033:-445.829,0,-46.917 0/1:97:9,88:9:353:88:3515:-275.106,0,-2.92765 0/1:157:35,122:35:1397:122:4873:-365.617,0,-78.7247 0/1:108:28,80:28:1123:80:3150:-236.104,0,-68.8141 0/1:159:48,109:48:1921:109:4391:-328.009,0,-125.45 dDocent_Contig_9787 112 . T G 137.973 . AB=0.173913;ABP=45.4956;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=124;DPB=124;DPRA=2.76923;EPP=22.5536;EPPR=252.73;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.888889;PAIREDR=0.626087;PAO=0;PQA=0;PQR=0;PRO=0;QA=360;QR=4561;RO=115;RPL=9;RPP=22.5536;RPPR=252.73;RPR=0;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=252.73;SRR=115;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:25,1:25:941:1:40:0,-3.8311,-80.986 0/1:46:38,8:38:1526:8:320:-15.3201,0,-123.734 0/0:28:28,0:28:1137:0:0:0,-8.42884,-102.609 0/0:12:12,0:12:470:0:0:0,-3.61236,-42.6441 0/0:9:9,0:9:367:0:0:0,-2.70927,-33.3953 0/0:3:3,0:3:120:0:0:0,-0.90309,-11.1873 dDocent_Contig_9788 7 . A C 440.192 . AB=0.18797;ABP=115.486;AC=2;AF=0.166667;AN=12;AO=41;CIGAR=1X;DP=550;DPB=550;DPRA=1.05;EPP=92.0407;EPPR=1103.95;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998028;PAO=0;PQA=0;PQR=0;PRO=0;QA=1576;QR=19325;RO=507;RPL=0;RPP=92.0407;RPPR=1103.95;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=507;SRP=1103.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:65:49,16:49:1859:16:618:-36.3931,0,-147.997 0/0:118:108,10:108:4110:10:386:0,-0.424369,-334.888 0/1:68:59,9:59:2239:9:344:-10.8477,0,-181.264 0/0:114:110,3:110:4215:3:115:0,-23.5747,-368.733 0/0:88:87,0:87:3317:0:0:0,-26.1896,-298.504 0/0:97:94,3:94:3585:3:113:0,-18.6605,-312.234 dDocent_Contig_9790 23 . A G 5360.75 . AB=0.428894;ABP=22.4653;AC=6;AF=0.5;AN=12;AO=190;CIGAR=1X3M;DP=443;DPB=443;DPRA=0;EPP=415.59;EPPR=524.164;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.0684211;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7520;QR=9344;RO=240;RPL=0;RPP=415.59;RPPR=524.164;RPR=190;RUN=1;SAF=190;SAP=415.59;SAR=0;SRF=240;SRP=524.164;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:63:30,0,31:30:1168:0,31:0,1211:-90.526,-99.5569,-195.546,0,-95.999,-86.6671 0|1:79:45,0,30:45:1763:0,30:0,1199:-85.2822,-98.8286,-243.8,0,-145.041,-136.01 0|1:67:46,0,20:46:1787:0,20:0,767:-49.0891,-62.9365,-209.767,0,-146.833,-140.812 0|1:76:53,0,23:53:2067:0,23:0,915:-59.7732,-75.7278,-245.62,0,-170.287,-163.363 0|1:67:42,5,20:42:1640:5,20:185,796:-52.9189,-50.4359,-183.744,0,-119.707,-128.816 0|1:91:24,1,66:24:919:1,66:21,2632:-209.707,-215.346,-290.453,0,-73.9961,-55.7102 dDocent_Contig_9791 38 . C T 2670.29 . AB=0.384906;ABP=33.5011;AC=6;AF=0.5;AN=12;AO=102;CIGAR=1X;DP=265;DPB=265;DPRA=0;EPP=224.5;EPPR=356.96;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.981595;PAO=0;PQA=0;PQR=0;PRO=0;QA=3956;QR=6342;RO=163;RPL=0;RPP=224.5;RPPR=356.96;RPR=102;RUN=1;SAF=102;SAP=224.5;SAR=0;SRF=163;SRP=356.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:25,7:25:967:7:251:-13.2987,0,-77.7013 0/1:43:27,16:27:1035:16:623:-43.4639,0,-80.5039 0/1:107:56,51:56:2191:51:1975:-145.762,0,-165.172 0/1:34:23,11:23:901:11:440:-29.7216,0,-71.1697 0/1:28:18,10:18:702:10:393:-27.2994,0,-55.0762 0/1:21:14,7:14:546:7:274:-18.7053,0,-43.1595 dDocent_Contig_9792 26 . A G 3603.63 . AB=0.421569;ABP=19.3602;AC=6;AF=0.5;AN=12;AO=129;CIGAR=1X;DP=306;DPB=306;DPRA=0;EPP=283.13;EPPR=370.185;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.930233;PAIREDR=0.903955;PAO=0;PQA=0;PQR=0;PRO=0;QA=5132;QR=6926;RO=177;RPL=0;RPP=283.13;RPPR=387.361;RPR=129;RUN=1;SAF=129;SAP=283.13;SAR=0;SRF=175;SRP=370.185;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:20,14:20:794:14:561:-40.5976,0,-61.545 0/1:66:27,39:27:1050:39:1561:-120.859,0,-74.9285 0/1:49:34,15:34:1333:15:599:-39.4943,0,-105.485 0/1:87:53,34:53:2067:34:1371:-97.4559,0,-160.034 0/1:25:16,9:16:612:9:322:-21.7816,0,-47.8754 0/1:45:27,18:27:1070:18:718:-51.3961,0,-83.0482 dDocent_Contig_9793 8 . A G 1070.36 . AB=0.246305;ABP=116.494;AC=4;AF=0.333333;AN=12;AO=50;CIGAR=1X;DP=293;DPB=293;DPRA=1.12778;EPP=111.584;EPPR=530.678;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.56;PAIREDR=0.917695;PAO=0;PQA=0;PQR=0;PRO=0;QA=1933;QR=9232;RO=243;RPL=0;RPP=111.584;RPPR=530.678;RPR=50;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=243;SRP=530.678;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:38,16:38:1442:16:619:-39.7944,0,-113.799 0/1:45:36,9:36:1347:9:344:-17.7714,0,-107.963 0/1:53:37,16:37:1424:16:624:-40.5456,0,-112.486 0/1:51:42,9:42:1571:9:346:-16.1467,0,-126.308 0/0:49:49,0:49:1879:0:0:0,-14.7505,-169.356 0/0:41:41,0:41:1569:0:0:0,-12.3422,-141.478 dDocent_Contig_9794 12 . G A 2540.12 . AB=0.0464396;ABP=580.158;AC=0;AF=0;AN=12;AO=15;CIGAR=1X1M2X1M1X3M1X1M;DP=527;DPB=527;DPRA=0;EPP=35.5824;EPPR=556.736;GTI=0;LEN=1;MEANALT=5.66667;MQM=45.2667;MQMR=60;NS=6;NUMALT=6;ODDS=0;PAIRED=0.666667;PAIREDR=0.980392;PAO=0;PQA=0;PQR=0;PRO=0;QA=492;QR=9809;RO=255;RPL=0;RPP=35.5824;RPPR=556.736;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=255;SRP=556.736;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:98:44,5,29,7,9,0,3:44:1688:5,29,7,9,0,3:95,1033,242,162,0,118:-65.4865,-73.0425,-210.121,0,-132.949,-129.909,-59.3383,-192.24,-119.252,-195.826,-69.2994,-202.186,-129.205,-188.493,-205.168,-78.7318,-211.626,-138.639,-197.933,-207.878,-217.32,-69.0189,-201.918,-128.929,-188.224,-198.169,-207.611,-206.708 0|0:139:73,4,33,17,0,1,8:73:2805:4,33,17,0,1,8:158,1004,606,0,41,293:-51.8773,-60.8589,-289.946,0,-217.279,-220.335,-25.4275,-242.734,-181.858,-250.607,-73.8525,-291.15,-230.269,-255.725,-304.14,-70.4671,-287.765,-226.884,-252.34,-300.756,-300.455,-49.9096,-267.212,-206.332,-231.787,-280.202,-276.818,-277.794 0|0:86:48,6,10,10,0,3,9:48:1856:6,10,10,0,3,9:239,345,386,0,122,356:-17.2521,-12.0222,-162.669,-4.77905,-137.544,-154.21,0,-132.776,-125.522,-149.442,-31.7015,-164.475,-157.22,-152.453,-184.152,-21.6358,-154.411,-147.156,-142.388,-174.088,-173.185,-2.39713,-135.174,-127.92,-123.152,-154.851,-144.787,-152.142 0|0:122:64,0,28,22,1,4,0:64:2477:0,28,22,1,4,0:0,903,743,18,158,0:-45.6824,-64.9483,-268.448,0,-203.497,-195.068,-5.63211,-209.148,-144.204,-202.525,-63.9,-267.399,-202.448,-208.099,-267.098,-51.9408,-255.445,-190.494,-196.145,-254.396,-254.241,-64.9483,-268.448,-203.497,-209.148,-267.399,-255.445,-268.448 0|0:24:15,0,0,7,0,0,2:15:569:0,0,7,0,0,2:0,0,274,0,0,78:-18.0149,-22.5304,-69.174,-22.5304,-69.174,-69.174,0,-46.6415,-46.6415,-44.5343,-22.5304,-69.174,-69.174,-46.6415,-69.174,-22.5304,-69.174,-69.174,-46.6415,-69.174,-69.174,-16.1191,-62.7618,-62.7618,-40.2287,-62.7618,-62.7618,-62.1597 0|0:58:11,0,1,31,0,6,9:11:414:0,1,31,0,6,9:0,40,942,0,240,337:-66.9202,-70.2315,-104.159,-66.9885,-100.917,-100.616,0,-33.9133,-30.6714,-24.5814,-70.2315,-104.159,-100.917,-33.9133,-104.159,-50.4504,-84.3818,-81.1389,-14.1387,-84.3818,-82.5756,-42.6199,-76.5525,-73.3096,-6.31829,-76.5525,-56.7723,-73.8433 dDocent_Contig_9795 7 . A T 439.812 . AB=0.128931;ABP=383.332;AC=1;AF=0.0833333;AN=12;AO=53;CIGAR=1X;DP=1110;DPB=1110;DPRA=2.6039;EPP=118.098;EPPR=2293.91;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.998104;PAO=0;PQA=0;PQR=0;PRO=0;QA=2019;QR=40085;RO=1055;RPL=0;RPP=118.098;RPPR=2293.91;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=1055;SRP=2293.91;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:122:122,0:122:4650:0:0:0,-36.7257,-418.546 0/0:116:116,0:116:4401:0:0:0,-34.9195,-396.164 0/0:70:69,0:69:2617:0:0:0,-20.7711,-235.608 0/0:157:152,5:152:5789:5:193:0,-29.5203,-503.244 0/0:327:320,7:320:12190:7:259:0,-74.7737,-1072.96 0/1:318:276,41:276:10438:41:1567:-45.5041,0,-843.279 dDocent_Contig_9797 12 . A C 68.4703 . AB=0.190476;ABP=20.4855;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=140;DPB=140;DPRA=0.882353;EPP=11.6962;EPPR=298.331;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=159;QR=5408;RO=136;RPL=0;RPP=11.6962;RPPR=298.331;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=136;SRP=298.331;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:762:0:0:0,-5.71957,-68.9008 0/1:21:17,4:17:677:4:159:-8.36981,0,-54.9367 0/0:10:10,0:10:390:0:0:0,-3.0103,-35.4498 0/0:25:25,0:25:989:0:0:0,-7.52575,-89.304 0/0:3:3,0:3:123:0:0:0,-0.90309,-11.4648 0/0:62:62,0:62:2467:0:0:0,-18.6639,-222.172 dDocent_Contig_9798 64 . T G 12956.6 . AB=0.520245;ABP=5.91181;AC=7;AF=0.583333;AN=12;AO=439;CIGAR=1X;DP=830;DPB=830;DPRA=0;EPP=956.287;EPPR=852.056;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=17214;QR=15512;RO=391;RPL=439;RPP=956.287;RPPR=852.056;RPR=0;RUN=1;SAF=439;SAP=956.287;SAR=0;SRF=391;SRP=852.056;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:181:62,119:62:2478:119:4661:-364.944,0,-168.675 0/1:164:105,59:105:4195:59:2313:-158.968,0,-328.148 0/1:125:26,99:26:1045:99:3857:-309.515,0,-56.7147 0/1:314:170,144:170:6687:144:5669:-415.522,0,-507.021 1/1:15:0,15:0:0:15:595:-53.8897,-4.51545,0 0/1:31:28,3:28:1107:3:119:-1.76308,0,-90.5857 dDocent_Contig_9799 24 . C T 833.282 . AB=0.0385675;ABP=674.342;AC=3;AF=0.25;AN=12;AO=16;CIGAR=1X2M;DP=534;DPB=534;DPRA=0;EPP=37.7539;EPPR=919.552;GTI=0;LEN=1;MEANALT=3;MQM=57.875;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.0625;PAIREDR=0.947005;PAO=0;PQA=0;PQR=0;PRO=0;QA=594;QR=17114;RO=434;RPL=0;RPP=37.7539;RPPR=945.429;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=431;SRP=919.552;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:118:107,8,0,2:107:4157:8,0,2:322,0,77:0,-5.66275,-344.789,-32.2102,-347.198,-373.737,-25.8912,-340.876,-367.415,-366.813 0|1:124:98,13,7,4:98:3863:13,7,4:518,286,140:-13.1587,0,-313.885,-19.055,-294.198,-334.747,-31.2866,-306.419,-325.475,-347.871 0|1:88:60,15,6,7:60:2394:15,6,7:608,243,273:-32.0809,0,-192.643,-30.1044,-177.121,-225.454,-27.7092,-174.722,-204.824,-222.754 0|1:103:91,10,1,1:91:3597:10,1,1:390,40,34:-4.67707,0,-293.007,-28.7745,-292.723,-324.475,-29.317,-293.26,-322.019,-325.013 0|0:48:38,0,8,2:38:1502:0,8,2:0,316,70:-14.604,-26.0431,-149.651,0,-123.648,-121.24,-20.4728,-144.072,-118.07,-143.47 0|0:53:40,0,12,0:40:1601:0,12,0:0,486,0:-28.0292,-40.0704,-171.954,0,-131.878,-128.266,-40.0704,-171.954,-131.878,-171.954 dDocent_Contig_9800 83 . G T 2560.76 . AB=0.37884;ABP=40.37;AC=6;AF=0.5;AN=12;AO=111;CIGAR=1X;DP=293;DPB=293;DPRA=0;EPP=244.044;EPPR=393.875;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.414414;PAIREDR=0.433333;PAO=0;PQA=0;PQR=0;PRO=0;QA=3926;QR=6217;RO=180;RPL=111;RPP=244.044;RPPR=393.875;RPR=0;RUN=1;SAF=111;SAP=244.044;SAR=0;SRF=180;SRP=393.875;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:57:25,32:25:853:32:1139:-85.6609,0,-59.9253 0/1:63:39,23:39:1336:23:805:-53.7959,0,-101.565 0/1:43:34,8:34:1186:8:283:-13.0679,0,-94.3262 0/1:55:26,29:26:898:29:1025:-76.0064,0,-64.5784 0/1:38:24,14:24:827:14:495:-33.4444,0,-63.3083 0/1:37:32,5:32:1117:5:179:-5.32228,0,-89.702 dDocent_Contig_9802 164 . G A 1492.69 . AB=0.5;ABP=3.0103;AC=5;AF=0.416667;AN=12;AO=49;CIGAR=1X;DP=221;DPB=221;DPRA=0.330827;EPP=109.412;EPPR=376.504;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1962;QR=6896;RO=172;RPL=49;RPP=109.412;RPPR=376.504;RPR=0;RUN=1;SAF=0;SAP=109.412;SAR=49;SRF=0;SRP=376.504;SRR=172;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:25,12:25:1011:12:477:-32.1404,0,-80.1445 1/1:10:0,10:0:0:10:390:-35.4529,-3.0103,0 0/1:18:7,11:7:286:11:449:-35.3473,0,-20.6963 0/1:23:7,16:7:266:16:646:-51.5508,0,-17.3694 0/0:16:16,0:16:646:0:0:0,-4.81648,-58.4711 0/0:117:117,0:117:4687:0:0:0,-35.2205,-421.734 dDocent_Contig_9803 12 . C T 1162.87 . AB=0.132244;ABP=793.597;AC=3;AF=0.25;AN=12;AO=95;CIGAR=1X;DP=1639;DPB=1639;DPRA=0.434436;EPP=209.3;EPPR=3355.76;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3835;QR=61786;RO=1544;RPL=0;RPP=209.3;RPPR=3355.76;RPR=95;RUN=1;SAF=95;SAP=209.3;SAR=0;SRF=1544;SRP=3355.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:89:83,6:83:3304:6:243:0,-4.5437,-275.158 0/1:254:226,28:226:9030:28:1129:-25.4302,0,-735.696 0/1:217:176,41:176:7052:41:1658:-84.1208,0,-569.013 0/1:202:182,20:182:7289:20:805:-11.9582,0,-594.834 0/0:407:407,0:407:16283:0:0:0,-122.519,-1464.16 0/0:470:470,0:470:18828:0:0:0,-141.484,-1692.93 dDocent_Contig_9804 83 . C A 237.588 . AB=0.166667;ABP=124.613;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X;DP=378;DPB=378;DPRA=1.04324;EPP=50.7827;EPPR=776.054;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.909091;PAIREDR=0.918539;PAO=0;PQA=0;PQR=0;PRO=0;QA=751;QR=12864;RO=356;RPL=22;RPP=50.7827;RPPR=776.054;RPR=0;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=356;SRP=776.054;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:67:66,1:66:2355:1:37:0,-16.4712,-208.497 0/0:73:73,0:73:2665:0:0:0,-21.9752,-240.084 0/0:59:59,0:59:2114:0:0:0,-17.7608,-190.513 0/0:53:53,0:53:1937:0:0:0,-15.9546,-174.598 0/1:68:58,10:58:2090:10:365:-12.7271,0,-167.886 0/1:58:47,11:47:1703:11:349:-14.2536,0,-136.089 dDocent_Contig_9806 13 . T C 3925.58 . AB=0.397993;ABP=30.0339;AC=6;AF=0.5;AN=12;AO=119;CIGAR=1M1X5M;DP=299;DPB=286.143;DPRA=0;EPP=261.416;EPPR=183.243;GTI=0;LEN=1;MEANALT=4.16667;MQM=59.9748;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=0.941176;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4749;QR=3243;RO=83;RPL=0;RPP=261.416;RPPR=183.243;RPR=119;RUN=1;SAF=119;SAP=261.416;SAR=0;SRF=83;SRP=183.243;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:31:9,4,2,0,3,13:9:340:4,2,0,3,13:140,79,0,118,508:-39.0696,-30.9438,-57.6009,-35.7714,-52.7978,-63.0334,-41.7789,-58.805,-63.6355,-69.6433,-32.1173,-49.1446,-53.9745,-59.9824,-59.0793,0,-17.0381,-21.8647,-27.873,-18.2091,-23.9596 0|1:60:14,4,4,2,8,27:14:544:4,4,2,8,27:103,146,74,303,1075:-84.3376,-81.5775,-125.076,-79.65,-117.378,-123.15,-82.498,-120.227,-118.3,-126.602,-63.8519,-101.583,-99.6559,-102.505,-106.15,0,-37.7568,-35.827,-38.6725,-20.0213,-36.5997 0|1:48:4,7,0,12,3,22:4:158:7,0,12,3,22:214,0,475,121,875:-96.965,-82.6628,-93.5565,-98.1691,-95.6637,-111.172,-59.0693,-56.5709,-72.073,-68.4606,-88.4608,-85.9568,-101.463,-62.364,-100.56,-26.1136,-23.6263,-39.1202,0,-29.4092,-32.4975 0|1:67:21,0,3,4,10,29:21:827:0,3,4,10,29:0,119,153,388,1165:-89.6892,-96.0109,-164.046,-87.7268,-155.761,-154.858,-83.4569,-151.492,-143.207,-150.288,-64.3662,-132.401,-124.116,-119.847,-129.391,0,-68.0443,-59.7606,-55.4899,-36.398,-59.3145 0|1:53:22,6,0,0,14,10:22:862:6,0,0,14,10:174,0,0,551,404:-38.0947,-32.5114,-101.591,-44.7173,-103.397,-115.613,-44.7173,-103.397,-115.613,-115.613,0,-58.7034,-70.9137,-70.9137,-66.6993,-11.391,-70.0876,-82.3003,-82.3003,-37.5959,-79.29 0|1:40:13,6,0,0,3,18:13:512:6,0,0,3,18:186,0,0,122,722:-55.6235,-45.9872,-86.2987,-59.5368,-88.1049,-101.663,-59.5368,-88.1049,-101.663,-101.663,-49.4889,-78.06,-91.6173,-91.6173,-90.7142,0,-28.6159,-42.1612,-42.1612,-32.1106,-36.7426 dDocent_Contig_9807 8 . A C 314.076 . AB=0.160584;ABP=140.098;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X;DP=485;DPB=485;DPRA=0.787356;EPP=50.7827;EPPR=1008.4;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.590909;PAIREDR=0.75594;PAO=0;PQA=0;PQR=0;PRO=0;QA=835;QR=17668;RO=463;RPL=0;RPP=50.7827;RPPR=1008.4;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=463;SRP=1008.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:68:68,0:68:2589:0:0:0,-20.47,-233.21 0/0:103:103,0:103:3949:0:0:0,-31.0061,-355.505 0/0:63:63,0:63:2410:0:0:0,-18.9649,-217.108 0/0:114:114,0:114:4316:0:0:0,-34.3174,-388.518 0/1:64:49,15:49:1877:15:566:-32.0126,0,-149.913 0/1:73:66,7:66:2527:7:269:-2.599,0,-205.655 dDocent_Contig_9808 21 . A G 162.145 . AB=0.15493;ABP=76.4428;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=300;DPB=300;DPRA=0.662791;EPP=39.9253;EPPR=617.537;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.957597;PAO=0;PQA=0;PQR=0;PRO=0;QA=662;QR=11208;RO=283;RPL=0;RPP=39.9253;RPPR=617.537;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=283;SRP=617.537;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:36,1:36:1413:1:18:0,-9.33814,-125.62 0/1:49:43,6:43:1708:6:242:-7.40597,0,-139.194 0/0:57:57,0:57:2257:0:0:0,-17.1587,-203.292 0/0:63:58,5:58:2307:5:199:0,-0.676534,-189.505 0/1:22:17,5:17:682:5:203:-12.0302,0,-55.0872 0/0:72:72,0:72:2841:0:0:0,-21.6742,-255.809 dDocent_Contig_9809 14 . G T 54.0779 . AB=0.142857;ABP=34.0313;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=163;DPB=163;DPRA=1.03704;EPP=11.6962;EPPR=348.274;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.25;PAIREDR=0.974843;PAO=0;PQA=0;PQR=0;PRO=0;QA=163;QR=6337;RO=159;RPL=0;RPP=11.6962;RPPR=348.274;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=159;SRP=348.274;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:24,4:24:967:4:163:-6.62959,0,-78.899 0/0:43:43,0:43:1693:0:0:0,-12.9443,-152.597 0/0:37:37,0:37:1489:0:0:0,-11.1381,-134.253 0/0:41:41,0:41:1629:0:0:0,-12.3422,-146.841 0/0:4:4,0:4:162:0:0:0,-1.20412,-14.967 0/0:10:10,0:10:397:0:0:0,-3.0103,-36.0889 dDocent_Contig_9810 45 . G A 4666.4 . AB=0.324435;ABP=133.392;AC=7;AF=0.583333;AN=12;AO=177;CIGAR=1X;DP=507;DPB=507;DPRA=0;EPP=387.361;EPPR=719.596;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6943;QR=13050;RO=330;RPL=0;RPP=387.361;RPPR=719.596;RPR=177;RUN=1;SAF=177;SAP=387.361;SAR=0;SRF=330;SRP=719.596;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:82:68,14:68:2692:14:554:-25.5197,0,-217.725 0/1:101:80,21:80:3158:21:829:-44.5229,0,-253.907 0/1:114:80,34:80:3172:34:1353:-87.7169,0,-251.241 0/1:109:77,32:77:3038:32:1263:-81.1232,0,-240.7 1/1:20:1,19:1:41:19:742:-63.0059,-1.92603,0 0/1:81:24,57:24:949:57:2202:-173.974,0,-61.3307 dDocent_Contig_9811 15 . G T 50.3314 . AB=0.176471;ABP=18.4661;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=95;DPB=95;DPRA=1.08974;EPP=9.52472;EPPR=202.786;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.858696;PAO=0;PQA=0;PQR=0;PRO=0;QA=122;QR=3659;RO=92;RPL=0;RPP=9.52472;RPPR=202.786;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=92;SRP=202.786;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:17:14,3:14:561:3:122:-6.25498,0,-45.7151 0/0:12:12,0:12:480:0:0:0,-3.61236,-43.5515 0/0:12:12,0:12:488:0:0:0,-3.61236,-44.2704 0/0:27:27,0:27:1076:0:0:0,-8.12781,-97.1277 0/0:19:19,0:19:730:0:0:0,-5.71957,-66.0113 0/0:8:8,0:8:324:0:0:0,-2.40824,-29.5288 dDocent_Contig_9812 19 . T A 1756.85 . AB=0.163297;ABP=636.179;AC=3;AF=0.25;AN=12;AO=112;CIGAR=2X;DP=1148;DPB=1148;DPRA=1.37582;EPP=246.215;EPPR=2250.48;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999034;PAO=0;PQA=0;PQR=0;PRO=0;QA=4403;QR=40377;RO=1035;RPL=0;RPP=246.215;RPPR=2250.48;RPR=112;RUN=1;SAF=112;SAP=246.215;SAR=0;SRF=1035;SRP=2250.48;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:246:195,51:195:7608:51:2026:-108.486,0,-610.368 0|1:249:215,34:215:8428:34:1334:-45.372,0,-683.184 0|1:148:128,20:128:4995:20:792:-27.0489,0,-404.917 0|0:199:191,7:191:7452:7:251:0,-37.0729,-647.462 0|0:149:149,0:149:5774:0:0:0,-44.8535,-519.542 0|0:157:157,0:157:6120:0:0:0,-47.2617,-550.639 dDocent_Contig_9813 66 . A G 514.948 . AB=0.121756;ABP=625.59;AC=2;AF=0.166667;AN=12;AO=91;CIGAR=1X;DP=1480;DPB=1480;DPRA=2.32991;EPP=200.614;EPPR=3017.01;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.978022;PAIREDR=0.993516;PAO=0;PQA=0;PQR=0;PRO=0;QA=3431;QR=53110;RO=1388;RPL=91;RPP=200.614;RPPR=3017.01;RPR=0;RUN=1;SAF=91;SAP=200.614;SAR=0;SRF=1388;SRP=3017.01;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:163:149,14:149:5656:14:537:0,-0.395357,-460.317 0/1:273:240,32:240:9053:32:1200:-26.3173,0,-732.499 0/0:117:117,0:117:4584:0:0:0,-35.2205,-412.548 0/1:228:199,29:199:7595:29:1075:-28.399,0,-614.679 0/0:238:236,2:236:9043:2:77:0,-64.336,-806.201 0/0:461:447,14:447:17179:14:542:0,-89.6504,-1495.96 dDocent_Contig_9814 43 . A G 3641.22 . AB=0.247678;ABP=360.248;AC=6;AF=0.5;AN=12;AO=160;CIGAR=1X;DP=646;DPB=646;DPRA=0;EPP=350.446;EPPR=776.233;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.7016;NS=6;NUMALT=1;ODDS=0;PAIRED=0.99375;PAIREDR=0.969136;PAO=0;PQA=0;PQR=0;PRO=0;QA=6312;QR=19173;RO=486;RPL=0;RPP=350.446;RPPR=776.233;RPR=160;RUN=1;SAF=160;SAP=350.446;SAR=0;SRF=486;SRP=1058.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:76:63,13:63:2463:13:492:-21.7368,0,-197.476 0/1:113:98,15:98:3878:15:589:-19.3314,0,-315.025 0/1:68:43,25:43:1680:25:989:-68.8368,0,-128.598 0/1:107:95,12:95:3729:12:483:-11.6114,0,-303.426 0/1:110:72,38:72:2868:38:1522:-104.111,0,-225.113 0/1:172:115,57:115:4555:57:2237:-149.717,0,-358.109 dDocent_Contig_9815 72 . A G 3768.63 . AB=0.571429;ABP=14.7983;AC=4;AF=0.333333;AN=12;AO=152;CIGAR=1X;DP=298;DPB=298;DPRA=4.15625;EPP=333.074;EPPR=320.045;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5144;QR=4926;RO=146;RPL=152;RPP=333.074;RPPR=320.045;RPR=0;RUN=1;SAF=152;SAP=333.074;SAR=0;SRF=146;SRP=320.045;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:78:35,43:35:1184:43:1453:-107.585,0,-83.3808 0/1:70:29,41:29:989:41:1373:-102.791,0,-68.2468 0/1:46:18,28:18:586:28:956:-72.5041,0,-39.1999 0/1:72:32,40:32:1077:40:1362:-101.205,0,-75.5602 0/0:10:10,0:10:350:0:0:0,-3.0103,-31.8372 0/0:22:22,0:22:740:0:0:0,-6.62266,-66.9146 dDocent_Contig_9816 28 . C T 82.798 . AB=0.130435;ABP=84.8654;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=185;DPB=185;DPRA=1.18966;EPP=22.5536;EPPR=385.189;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=350;QR=6957;RO=176;RPL=0;RPP=22.5536;RPPR=385.189;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=176;SRP=385.189;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1104:0:0:0,-8.42884,-99.6387 0/0:39:39,0:39:1549:0:0:0,-11.7402,-139.653 0/0:22:22,0:22:861:0:0:0,-6.62266,-77.7941 0/0:27:27,0:27:1061:0:0:0,-8.12781,-95.7822 0/1:42:38,4:38:1501:4:163:-2.41517,0,-122.686 0/1:27:22,5:22:881:5:187:-9.05951,0,-71.4717 dDocent_Contig_9817 50 . A C 138.853 . AB=0.113208;ABP=209.628;AC=4;AF=0.333333;AN=12;AO=20;CIGAR=1X;DP=201;DPB=201;DPRA=0;EPP=46.4397;EPPR=396.047;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.39779;PAO=0;PQA=0;PQR=0;PRO=0;QA=812;QR=7098;RO=181;RPL=20;RPP=46.4397;RPPR=396.047;RPR=0;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=181;SRP=396.047;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:17,1:17:665:1:41:0,-1.32397,-56.0828 0/1:61:56,5:56:2217:5:203:-0.290226,0,-181.345 0/1:17:15,2:15:584:2:82:-2.66217,0,-47.7752 0/1:47:40,7:40:1554:7:282:-11.6046,0,-125.95 0/0:24:23,1:23:879:1:41:0,-3.13015,-75.3129 0/1:34:30,4:30:1199:4:163:-4.82341,0,-97.9533 dDocent_Contig_9818 107 . N T 1365.17 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=44;CIGAR=1X;DP=44;DPB=44;DPRA=0;EPP=98.5551;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1490;QR=0;RO=0;RPL=0;RPP=98.5551;RPPR=0;RPR=44;RUN=1;SAF=0;SAP=98.5551;SAR=44;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:131:-12.1132,-1.20412,0 1/1:9:0,9:0:0:9:289:-26.3199,-2.70927,0 ./.:.:.:.:.:.:.:. 1/1:21:0,21:0:0:21:723:-65.3876,-6.32163,0 1/1:8:0,8:0:0:8:276:-25.1757,-2.40824,0 1/1:2:0,2:0:0:2:71:-6.74206,-0.60206,0 dDocent_Contig_9819 9 . C T 52.4921 . AB=0.0952381;ABP=301.846;AC=1;AF=0.0833333;AN=12;AO=30;CIGAR=1X;DP=1117;DPB=1117;DPRA=1.0899;EPP=68.1545;EPPR=2363.4;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.99816;PAO=0;PQA=0;PQR=0;PRO=0;QA=1162;QR=41788;RO=1087;RPL=0;RPP=68.1545;RPPR=2363.4;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=1087;SRP=2363.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:192:192,0:192:7364:0:0:0,-57.7978,-662.603 0/0:182:182,0:182:7023:0:0:0,-54.7875,-631.929 0/0:175:175,0:175:6765:0:0:0,-52.6802,-608.726 0/0:174:174,0:174:6648:0:0:0,-52.3792,-598.219 0/0:184:174,10:174:6655:10:388:0,-20.1116,-563.564 0/1:210:190,20:190:7333:20:774:-6.77208,0,-596.587 dDocent_Contig_9820 34 . C T 124.778 . AB=0.214286;ABP=22.8638;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=177;DPB=177;DPRA=0.744186;EPP=18.2106;EPPR=372.161;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=286;QR=6690;RO=170;RPL=0;RPP=18.2106;RPPR=372.161;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=170;SRP=372.161;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:556:0:0:0,-4.21442,-50.3833 0/0:21:21,0:21:816:0:0:0,-6.32163,-73.7556 0/0:20:19,1:19:764:1:41:0,-1.92603,-64.9888 0/1:28:22,6:22:874:6:245:-14.0006,0,-70.5413 0/0:53:53,0:53:2083:0:0:0,-15.9546,-187.654 0/0:41:41,0:41:1597:0:0:0,-12.3422,-143.957 dDocent_Contig_9821 42 . G A 2119.25 . AB=0.300353;ABP=100.987;AC=3;AF=0.25;AN=12;AO=87;CIGAR=1X;DP=357;DPB=357;DPRA=3.46667;EPP=191.928;EPPR=589.308;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3428;QR=10657;RO=270;RPL=0;RPP=191.928;RPPR=589.308;RPR=87;RUN=1;SAF=87;SAP=191.928;SAR=0;SRF=270;SRP=589.308;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:91:32,59:32:1255:59:2345:-183.823,0,-85.8237 0/1:151:135,16:135:5332:16:622:-10.8493,0,-434.296 0/0:29:27,2:27:1070:2:78:0,-1.32657,-89.191 0/1:41:31,10:31:1243:10:383:-22.4749,0,-99.8008 0/0:13:13,0:13:510:0:0:0,-3.91339,-46.2407 0/0:32:32,0:32:1247:0:0:0,-9.63296,-112.503 dDocent_Contig_9822 39 . A G 5813.19 . AB=0.0590909;ABP=374.49;AC=6;AF=0.5;AN=12;AO=13;CIGAR=4M1X;DP=386;DPB=386;DPRA=0;EPP=31.2394;EPPR=228.843;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.384615;PAIREDR=0.711538;PAO=0;PQA=0;PQR=0;PRO=0;QA=515;QR=4068;RO=104;RPL=0;RPP=31.2394;RPPR=228.843;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=104;SRP=228.843;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:68:21,37,8,2:21:821:37,8,2:1467,326,80:-114.423,0,-56.3449,-93.848,-40.5843,-158.931,-114.154,-60.8928,-154.749,-181.043 1|0:87:16,43,24,4:16:632:43,24,4:1708,924,156:-159.637,-23.8329,-62.8976,-88.6104,0,-133.391,-151.63,-63.0188,-127.793,-202.432 0|1:65:16,29,13,7:16:616:29,13,7:1123,525,279:-87.413,0,-41.8342,-48.9448,-7.27791,-95.6016,-69.2543,-27.5888,-76.5392,-117.717 1|0:69:16,26,24,0:16:637:26,24,0:1002,934,0:-101.728,-24.2796,-68.9079,-29.8038,0,-75.0352,-106.545,-76.7347,-82.2599,-159 0|1:39:12,20,7,0:12:475:20,7,0:791,275,0:-61.4862,0,-33.0743,-42.4822,-16.4789,-79.4681,-65.0986,-39.0949,-81.5753,-104.192 0|1:58:23,24,11,0:23:887:24,11,0:912,424,0:-67.8534,0,-65.6084,-39.9659,-38.0237,-109.49,-74.7771,-72.8331,-112.802,-147.612 dDocent_Contig_9823 98 . N A 64.5902 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=68;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_9824 12 . A T 1092.81 . AB=0.330769;ABP=35.3485;AC=6;AF=0.5;AN=12;AO=43;CIGAR=1M1X3M;DP=130;DPB=131.2;DPRA=0;EPP=96.3836;EPPR=187.585;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.906977;PAIREDR=0.929412;PAO=0;PQA=0;PQR=0;PRO=0;QA=1730;QR=3372;RO=85;RPL=0;RPP=96.3836;RPPR=187.585;RPR=43;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=85;SRP=187.585;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:23:13,2,8:13:510:2,8:67,312:-21.7733,-20.2714,-61.6084,0,-36.5685,-39.5788 0|1:31:18,0,13:18:722:0,13:0,524:-38.1742,-43.5928,-103.081,0,-59.8895,-55.9761 0|1:17:11,0,6:11:443:0,6:0,244:-17.2211,-20.5324,-57.0426,0,-36.9149,-35.1088 0|1:11:7,0,4:7:273:0,4:0,163:-11.7471,-13.8543,-36.2811,0,-22.8274,-21.6233 0|1:24:14,0,10:14:555:0,10:0,405:-29.5848,-33.7992,-79.4761,0,-46.0778,-43.0675 0|1:24:22,0,2:22:869:0,2:0,82:-0.554958,-7.17762,-78.6694,0,-71.9,-71.298 dDocent_Contig_9825 9 . C G 51.1475 . AB=0.134615;ABP=63.3104;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=170;DPB=170;DPRA=0.965517;EPP=24.725;EPPR=350.446;GTI=0;LEN=1;MEANALT=1;MQM=51.6;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.7;PAIREDR=0.91875;PAO=0;PQA=0;PQR=0;PRO=0;QA=379;QR=6170;RO=160;RPL=0;RPP=24.725;RPPR=350.446;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=160;SRP=350.446;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:16,1:16:623:1:39:0,-1.22095,-52.5136 0/1:39:35,4:35:1357:4:155:-1.22546,0,-110.673 0/0:43:41,2:41:1585:2:72:0,-6.84513,-136.816 0/0:35:35,0:35:1341:0:0:0,-10.536,-120.975 0/1:13:10,3:10:384:3:113:-6.62558,0,-31.0017 0/0:23:23,0:23:880:0:0:0,-6.92369,-79.5194 dDocent_Contig_9826 63 . G C 35.2381 . AB=0.118644;ABP=77.5396;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=337;DPB=337;DPRA=2.04667;EPP=39.9253;EPPR=697.881;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=636;QR=12134;RO=320;RPL=17;RPP=39.9253;RPPR=697.881;RPR=0;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=320;SRP=697.881;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1144:0:0:0,-9.0309,-103.259 0/0:150:145,5:145:5464:5:183:0,-28.331,-474.931 0/1:28:25,3:25:998:3:122:-2.94365,0,-81.69 0/0:61:59,2:59:2250:2:78:0,-10.9595,-195.315 0/0:37:34,3:34:1278:3:111:0,-0.78533,-104.953 0/1:31:27,4:27:1000:4:142:-3.79245,0,-80.966 dDocent_Contig_9827 8 . A T 2147.11 . AB=0.52381;ABP=3.73412;AC=2;AF=0.166667;AN=12;AO=77;CIGAR=1X;DP=343;DPB=343;DPRA=1.5;EPP=170.214;EPPR=578.45;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2908;QR=10136;RO=265;RPL=0;RPP=170.214;RPPR=578.45;RPR=77;RUN=1;SAF=77;SAP=170.214;SAR=0;SRF=265;SRP=578.45;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:75:75,0:75:2871:0:0:0,-22.5772,-258.566 0/0:34:34,0:34:1301:0:0:0,-10.235,-117.38 0/0:47:47,0:47:1816:0:0:0,-14.1484,-163.69 0/0:40:40,0:40:1515:0:0:0,-12.0412,-136.623 0/1:95:23,71:23:874:71:2683:-212.976,0,-50.2933 0/1:52:46,6:46:1759:6:225:-4.95636,0,-142.911 dDocent_Contig_9828 9 . C A 211.022 . AB=0.132184;ABP=207.478;AC=3;AF=0.25;AN=12;AO=26;CIGAR=3M1X1M;DP=321;DPB=322.2;DPRA=0.986111;EPP=59.4686;EPPR=626.223;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.461538;PAIREDR=0.651568;PAO=0.333333;PQA=11;PQR=11;PRO=0.333333;QA=976;QR=10950;RO=287;RPL=0;RPP=59.4686;RPPR=626.223;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=287;SRP=626.223;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:63:55,0,8:55:2093:0,8:0,312:-9.48003,-26.0367,-197.694,0,-172.045,-169.637 0|0:39:33,3,3:33:1241:3,3:110,116:0,-0.953365,-101.716,-0.395765,-93.0903,-101.177 0|1:42:37,0,5:37:1410:0,5:0,189:-4.73213,-15.8702,-131.535,0,-116.043,-114.538 0|1:69:57,2,10:57:2163:2,10:74,359:-12.1114,-23.2146,-199.991,0,-171.317,-174.36 0|0:77:75,0,0:75:2883:0,0:0,0:0,-22.5772,-259.473,-22.5772,-259.473,-259.473 0|0:31:30,0,0:30:1160:0,0:0,0:0,-9.0309,-104.258,-9.0309,-104.258,-104.258 dDocent_Contig_9829 10 . G A 1029.61 . AB=0.125;ABP=188.671;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X10M;DP=196;DPB=200.909;DPRA=0;EPP=46.4397;EPPR=263.587;GTI=0;LEN=1;MEANALT=3.8;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.833333;PAO=0;PQA=0;PQR=0;PRO=0;QA=804;QR=4706;RO=120;RPL=0;RPP=46.4397;RPPR=263.587;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=120;SRP=263.587;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:22:11,1,0,9,0:11:428:1,0,9,0:31,0,366,0:-26.9817,-28.0851,-62.9538,-30.293,-63.2548,-65.468,0,-33.0537,-35.2643,-32.555,-30.293,-63.2548,-65.468,-35.2643,-65.468 0|0:22:19,1,0,0,1:19:737:1,0,0,1:31,0,0,40:0,-3.48799,-63.867,-5.71957,-64.168,-66.3819,-5.71957,-64.168,-66.3819,-66.3819,-2.35128,-60.8716,-63.0854,-63.0854,-62.7844 0|0:29:22,1,1,3,1:22:874:1,1,3,1:31,37,105,41:-1.93683,-6.34846,-78.0529,-5.59509,-75.3968,-77.3103,0,-69.8185,-69.0755,-71.1295,-5.16099,-74.9689,-74.2261,-68.6474,-76.8824 0|0:35:17,4,2,9,3:17:677:4,2,9,3:124,76,354,122:-24.0268,-20.2962,-74.8439,-23.3093,-70.2145,-78.471,0,-46.9312,-49.9518,-53.077,-19.0731,-65.9836,-69.0075,-45.7193,-73.9391 0|1:47:27,1,2,6,11:27:1046:1,2,6,11:31,72,226,438:-27.9591,-33.8739,-119.498,-30.7562,-114.466,-116.08,-17.5757,-101.289,-98.1708,-101.698,0,-83.7321,-80.6142,-67.4357,-82.6361 0|0:41:24,1,0,12,4:24:944:1,0,12,4:31,0,467,163:-31.1568,-36.17,-113.519,-38.3815,-113.82,-116.035,0,-75.4455,-77.6597,-74.0473,-24.9279,-100.371,-102.586,-64.2098,-101.382 dDocent_Contig_9830 9 . C G 163.837 . AB=0.150538;ABP=101.661;AC=3;AF=0.25;AN=12;AO=18;CIGAR=1X;DP=228;DPB=228;DPRA=0.770213;EPP=42.0968;EPPR=459.02;GTI=0;LEN=1;MEANALT=1;MQM=57.3333;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=0.904762;PAO=0;PQA=0;PQR=0;PRO=0;QA=694;QR=8118;RO=210;RPL=0;RPP=42.0968;RPPR=459.02;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=210;SRP=459.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:29,7:29:1117:7:272:-13.9042,0,-89.9921 0/0:47:44,3:44:1702:3:115:0,-3.53167,-142.819 0/0:47:47,0:47:1825:0:0:0,-14.1484,-164.497 0/1:40:35,5:35:1348:5:190:-5.37944,0,-109.565 0/1:17:15,2:15:573:2:78:-2.28596,0,-46.7936 0/0:41:40,1:40:1553:1:39:0,-8.44566,-136.142 dDocent_Contig_9831 61 . T A 1182.8 . AB=0.144231;ABP=117.347;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X2M6D10M;DP=176;DPB=156.737;DPRA=0.722222;EPP=35.5824;EPPR=246.215;GTI=0;LEN=1;MEANALT=2.25;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=568;QR=4300;RO=112;RPL=15;RPP=35.5824;RPPR=246.215;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=112;SRP=246.215;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:31:11,3,17:11:409:3,17:119,649:-49.9153,-43.4287,-75.994,0,-23.6519,-28.3353 0|0:42:27,6,9:27:1032:6,9:237,323:-18.1914,-6.80305,-89.6944,0,-65.1656,-81.9604 0|0:15:6,4,4:6:233:4,4:132,158:-11.2173,-2.3859,-20.3213,0,-8.52235,-17.9637 1|0:16:0,2,14:0:0:2,14:80,483:-46.1657,-39.5687,-38.9666,-6.98973,0,-2.77531 0|0:40:39,0,1:39:1511:0,1:0,29:0,-11.7402,-135.969,-9.14154,-133.663,-133.362 0|0:32:29,0,1:29:1115:0,1:0,32:0,-8.72987,-100.326,-6.15149,-97.75,-97.4489 dDocent_Contig_9832 51 . T C 586.739 . AB=0.208861;ABP=119.335;AC=3;AF=0.25;AN=12;AO=40;CIGAR=1X;DP=288;DPB=288;DPRA=1.24;EPP=89.8692;EPPR=541.535;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.4;PAIREDR=0.637097;PAO=0;PQA=0;PQR=0;PRO=0;QA=1498;QR=9012;RO=248;RPL=22;RPP=3.87889;RPPR=3.0103;RPR=18;RUN=1;SAF=22;SAP=3.87889;SAR=18;SRF=124;SRP=3.0103;SRR=124;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:30,11:30:1065:11:423:-26.0744,0,-83.792 0/1:55:49,6:49:1753:6:223:-3.87023,0,-141.478 0/0:44:41,3:41:1493:3:122:0,-1.87283,-123.274 0/0:40:40,0:40:1444:0:0:0,-12.0412,-130.241 0/0:46:42,4:42:1562:4:149:0,-0.0768339,-127.079 0/1:62:46,16:46:1695:16:581:-33.9495,0,-134.15 dDocent_Contig_9833 3 . C T 34.8989 . AB=0.140187;ABP=123.334;AC=2;AF=0.166667;AN=12;AO=31;CIGAR=1X;DP=335;DPB=335;DPRA=3.58537;EPP=70.3259;EPPR=654.481;GTI=0;LEN=1;MEANALT=1;MQM=52;MQMR=47.7961;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=972;QR=9898;RO=304;RPL=0;RPP=70.3259;RPPR=663.138;RPR=31;RUN=1;SAF=0;SAP=70.3259;SAR=31;SRF=1;SRP=654.481;SRR=303;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1119:0:0:0,-10.536,-91.8671 0/0:115:104,11:104:3371:11:372:0,-3.91523,-244.727 0/1:89:76,13:76:2445:13:372:-5.00932,0,-177.642 0/0:72:67,5:67:2222:5:164:0,-7.2406,-168.209 0/0:6:6,0:6:208:0:0:0,-1.80618,-14.5273 0/1:18:16,2:16:533:2:64:-0.66012,0,-34.7799 dDocent_Contig_9834 14 . G A 157.332 . AB=0.124031;ABP=161.393;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X;DP=399;DPB=399;DPRA=1.1082;EPP=50.7827;EPPR=821.655;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.954545;PAIREDR=0.931034;PAO=0;PQA=0;PQR=0;PRO=0;QA=872;QR=14955;RO=377;RPL=0;RPP=50.7827;RPPR=821.655;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=377;SRP=821.655;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:61:61,0:61:2419:0:0:0,-18.3628,-217.86 0/1:72:64,8:64:2548:8:316:-7.12856,0,-207.773 0/0:52:50,2:50:1950:2:80:0,-8.06198,-168.104 0/0:65:62,3:62:2477:3:117:0,-8.65674,-212.161 0/0:92:91,1:91:3622:1:41:0,-23.6002,-321.901 0/1:57:49,8:49:1939:8:318:-11.8265,0,-157.55 dDocent_Contig_9835 12 . T G 40.0904 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=2;CIGAR=1X1M1X5M;DP=12;DPB=12;DPRA=2.8;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=3;MQM=5;MQMR=0;NS=3;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=10;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:4:0,3,1,0:0:0:3,1,0:108,10,0:-1.33274,-0.90309,0,-0.979112,-0.482874,-0.678082,-1.33274,-0.90309,-0.979112,-1.33274 .:.:.:.:.:.:.:. 1|1:1:0,0,0,0:0:0:0,0,0:0,0,0:0,0,0,0,0,0,0,0,0,0 .:.:.:.:.:.:.:. 1|1:7:0,4,0,2:0:0:4,0,2:146,0,10:-1.80362,-1.20412,0,-1.80362,-1.20412,-1.80362,-1.92072,-1.34333,-1.92072,-1.31866 .:.:.:.:.:.:.:. dDocent_Contig_9836 10 . C T 860.061 . AB=0.206573;ABP=162.303;AC=6;AF=0.5;AN=12;AO=44;CIGAR=1X;DP=213;DPB=213;DPRA=0;EPP=98.5551;EPPR=369.989;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.95858;PAO=0;PQA=0;PQR=0;PRO=0;QA=1768;QR=6467;RO=169;RPL=0;RPP=98.5551;RPPR=369.989;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=169;SRP=369.989;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:33,4:33:1296:4:163:-3.92032,0,-105.778 0/1:32:27,5:27:1042:5:202:-8.92891,0,-84.4478 0/1:48:42,6:42:1591:6:233:-6.88655,0,-129.002 0/1:27:24,3:24:891:3:123:-3.33698,0,-72.3641 0/1:22:11,11:11:421:11:441:-33.4225,0,-31.6155 0/1:47:32,15:32:1226:15:606:-40.7285,0,-96.4719 dDocent_Contig_9837 36 . T C 210.031 . AB=0.196429;ABP=47.8357;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=172;DPB=172;DPRA=0.965517;EPP=26.8965;EPPR=352.617;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.636364;PAIREDR=0.819876;PAO=0;PQA=0;PQR=0;PRO=0;QA=448;QR=6429;RO=161;RPL=0;RPP=26.8965;RPPR=352.617;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=161;SRP=352.617;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:37,0:37:1474:0:0:0,-11.1381,-132.906 0/0:33:33,0:33:1315:0:0:0,-9.93399,-118.613 0/1:34:28,6:28:1117:6:244:-12.1036,0,-90.5801 0/1:22:17,5:17:688:5:204:-12.1214,0,-55.6264 0/0:18:18,0:18:724:0:0:0,-5.41854,-65.4855 0/0:28:28,0:28:1111:0:0:0,-8.42884,-100.28 dDocent_Contig_9838 12 . G T 173.729 . AB=0.242424;ABP=22.0271;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=304;DPB=304;DPRA=0.924051;EPP=29.068;EPPR=637.08;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.856164;PAO=0;PQA=0;PQR=0;PRO=0;QA=476;QR=11717;RO=292;RPL=0;RPP=29.068;RPPR=637.08;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=292;SRP=637.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:25,8:25:1002:8:313:-18.5947,0,-80.5401 0/0:64:63,1:63:2529:1:41:0,-15.1714,-223.643 0/0:66:66,0:66:2653:0:0:0,-19.868,-238.89 0/0:45:45,0:45:1815:0:0:0,-13.5463,-163.556 0/0:47:47,0:47:1884:0:0:0,-14.1484,-169.763 0/0:49:46,3:46:1834:3:122:0,-3.37798,-153.894 dDocent_Contig_9840 60 . A G 1347.63 . AB=0.145954;ABP=756.436;AC=2;AF=0.166667;AN=12;AO=125;CIGAR=1X;DP=1891;DPB=1891;DPRA=1.93686;EPP=274.444;EPPR=3835.66;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.925779;PAO=0;PQA=0;PQR=0;PRO=0;QA=4735;QR=68354;RO=1765;RPL=125;RPP=274.444;RPPR=3835.66;RPR=0;RUN=1;SAF=125;SAP=274.444;SAR=0;SRF=1765;SRP=3835.66;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:392:385,6:385:14974:6:230:0,-96.9992,-1325.57 0/0:419:401,18:401:15127:18:662:0,-66.2275,-1300.88 0/1:308:269,39:269:10503:39:1477:-40.466,0,-851.937 0/1:384:322,62:322:12585:62:2366:-97.5191,0,-1016.29 0/0:351:351,0:351:13700:0:0:0,-105.662,-1232.08 0/0:37:37,0:37:1465:0:0:0,-11.1381,-132.097 dDocent_Contig_9841 17 . G A 40999 . AB=0.361957;ABP=791.371;AC=6;AF=0.5;AN=12;AO=1724;CIGAR=1X3M;DP=4763;DPB=4763;DPRA=0;EPP=3746.63;EPPR=5529.41;GTI=0;LEN=1;MEANALT=9.33333;MQM=44.9623;MQMR=46.7481;NS=6;NUMALT=2;ODDS=0;PAIRED=0.562645;PAIREDR=0.621218;PAO=0;PQA=0;PQR=0;PRO=0;QA=62628;QR=99053;RO=2545;RPL=0;RPP=3746.63;RPPR=5529.41;RPR=1724;RUN=1;SAF=1724;SAP=3746.63;SAR=0;SRF=2545;SRP=5529.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:764:464,29,235:464:18072:29,235:1145,8840:-553.889,-602.688,-1972.24,0,-1287.41,-1307.55 0|1:980:530,55,341:530:20508:55,341:2173,12457:-818.852,-806.026,-2224.72,0,-1262.87,-1332.59 0|1:679:358,29,260:358:14056:29,260:1156,9167:-596.826,-613.196,-1481.88,0,-786.003,-799.135 0|1:861:473,50,301:473:18356:50,301:1945,10961:-703.988,-692.265,-2018.1,0,-1186.77,-1250.26 0|1:817:360,46,362:360:14090:46,362:1787,13257:-930.918,-897.673,-1840.68,0,-815.261,-847.906 0|1:662:360,46,225:360:13971:46,225:1824,7946:-506.652,-471.535,-1481.68,0,-880.507,-956.259 dDocent_Contig_9843 147 . A C 598.013 . AB=0.287356;ABP=37.1798;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=1X;DP=331;DPB=331;DPRA=1.78279;EPP=57.2971;EPPR=667.481;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=969;QR=11475;RO=306;RPL=0;RPP=57.2971;RPPR=667.481;RPR=25;RUN=1;SAF=0;SAP=57.2971;SAR=25;SRF=0;SRP=667.481;SRR=306;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:531:0:0:0,-4.21442,-48.1311 0/0:5:5,0:5:182:0:0:0,-1.50515,-16.7343 0/0:22:22,0:22:818:0:0:0,-6.62266,-73.9309 0/0:60:60,0:60:2246:0:0:0,-18.0618,-202.337 0/0:143:143,0:143:5376:0:0:0,-43.0473,-483.804 0/1:87:62,25:62:2322:25:969:-61.3241,0,-182.986 dDocent_Contig_9845 28 . C G 966.059 . AB=0.160207;ABP=391.12;AC=4;AF=0.333333;AN=12;AO=71;CIGAR=1X;DP=513;DPB=513;DPRA=0;EPP=157.185;EPPR=960.63;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.356009;PAO=0;PQA=0;PQR=0;PRO=0;QA=2751;QR=17494;RO=441;RPL=0;RPP=157.185;RPPR=960.63;RPR=71;RUN=1;SAF=71;SAP=157.185;SAR=0;SRF=441;SRP=960.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:28,2:28:1085:2:77:0,-1.7227,-90.6293 0/1:44:35,9:35:1376:9:363:-19.789,0,-110.845 0/1:69:51,18:51:2041:18:675:-40.3034,0,-163.107 0/0:96:89,7:89:3510:7:243:0,-6.70587,-293.754 0/1:171:153,17:153:6083:17:677:-9.97938,0,-495.983 0/1:103:85,18:85:3399:18:716:-33.7559,0,-274.952 dDocent_Contig_9846 106 . N T 284.366 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=26;CIGAR=3X10I5M1X2M1X;DP=27;DPB=49.5;DPRA=0;EPP=59.4686;EPPR=0;GTI=0;LEN=1;MEANALT=1.2;MQM=15.1538;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0.153846;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=363;QR=0;RO=0;RPL=0;RPP=59.4686;RPPR=0;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:9:0,8:0:0:8:120:-9.12329,-2.40824,0 .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:12:-0.678788,-0.60206,0 1|1:4:0,4:0:0:4:33:-2.10684,-1.20412,0 1|1:5:0,5:0:0:5:93:-7.50531,-1.50515,0 1|1:7:0,7:0:0:7:105:-8.30466,-2.10721,0 dDocent_Contig_9847 107 . N T 100.548 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=101;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_9848 18 . C T 795.891 . AB=0.166078;ABP=277.099;AC=2;AF=0.166667;AN=12;AO=47;CIGAR=1X;DP=1188;DPB=1188;DPRA=0.625414;EPP=105.07;EPPR=2478.49;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9947;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.930702;PAO=0;PQA=0;PQR=0;PRO=0;QA=1860;QR=45232;RO=1140;RPL=0;RPP=105.07;RPPR=2478.49;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=1140;SRP=2478.49;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:185:185,0:185:7341:0:0:0,-55.6905,-660.33 0/1:164:146,18:146:5798:18:703:-14.2255,0,-472.26 0/1:119:90,29:90:3610:29:1157:-68.5855,0,-289.097 0/0:171:171,0:171:6762:0:0:0,-51.4761,-608.291 0/0:294:293,0:293:11666:0:0:0,-88.2018,-1048.76 0/0:255:255,0:255:10055:0:0:0,-76.7626,-904.337 dDocent_Contig_9849 97 . C T 829.997 . AB=0.09375;ABP=48.8827;AC=0;AF=0;AN=12;AO=3;CIGAR=1X2M1X;DP=161;DPB=161;DPRA=1.52381;EPP=9.52472;EPPR=263.587;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.641667;PAO=0;PQA=0;PQR=0;PRO=0;QA=114;QR=4587;RO=120;RPL=3;RPP=9.52472;RPPR=263.587;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=263.587;SRR=120;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:32:16,3,13:16:621:3,13:114,518:-37.8543,-33.3252,-83.441,0,-41.6837,-47.118 0|0:22:20,0,2:20:756:0,2:0,68:0,-6.0206,-68.018,-0.166251,-62.5069,-61.9049 0|0:19:17,0,2:17:659:0,2:0,76:-1.49469,-6.6122,-60.7593,0,-54.5276,-53.9255 0|0:20:19,0,1:19:712:0,1:0,41:0,-5.71957,-63.9964,-1.92603,-60.6106,-60.3096 0|0:24:17,0,7:17:652:0,7:0,277:-18.0716,-23.1891,-76.6952,0,-53.8978,-51.7906 0|0:44:31,0,13:31:1187:0,13:0,502:-32.2732,-41.6051,-139.012,0,-97.792,-93.8786 dDocent_Contig_9850 1 . N G 1448.29 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=64;CIGAR=1X;DP=64;DPB=64;DPRA=0;EPP=141.985;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=30.2188;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2094;QR=0;RO=0;RPL=0;RPP=141.985;RPPR=0;RPR=64;RUN=1;SAF=0;SAP=141.985;SAR=64;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:5:0,5:0:0:5:162:-10.204,-1.50515,0 1/1:19:0,19:0:0:19:631:-45.7591,-5.71957,0 1/1:4:0,4:0:0:4:134:-9.65509,-1.20412,0 1/1:20:0,20:0:0:20:668:-41.9589,-6.0206,0 1/1:8:0,8:0:0:8:231:-16.4441,-2.40824,0 1/1:8:0,8:0:0:8:268:-20.0297,-2.40824,0 dDocent_Contig_9851 24 . G C 8769.58 . AB=0.664093;ABP=63.5852;AC=6;AF=0.5;AN=12;AO=274;CIGAR=1X;DP=378;DPB=378;DPRA=5.61538;EPP=597.994;EPPR=228.843;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.040146;PAIREDR=0.615385;PAO=0;PQA=0;PQR=0;PRO=0;QA=10847;QR=4152;RO=104;RPL=0;RPP=597.994;RPPR=228.843;RPR=274;RUN=1;SAF=274;SAP=597.994;SAR=0;SRF=104;SRP=228.843;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:106:4,102:4:162:102:4019:-346.731,-16.9424,0 0/0:13:13,0:13:511:0:0:0,-3.91339,-46.3288 0/1:42:7,35:7:282:35:1385:-112.264,0,-13.1097 0/1:25:19,6:19:759:6:241:-14.5406,0,-61.1072 0/1:68:31,37:31:1255:37:1467:-111.804,0,-92.7478 0/1:124:30,94:30:1183:94:3735:-298.841,0,-69.4221 dDocent_Contig_9852 16 . T G 5212.56 . AB=0.275064;ABP=344.92;AC=6;AF=0.5;AN=12;AO=214;CIGAR=1X;DP=778;DPB=778;DPRA=0;EPP=467.705;EPPR=1225.55;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.986;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0;PAIREDR=0.984014;PAO=0;PQA=0;PQR=0;PRO=0;QA=8501;QR=22719;RO=563;RPL=0;RPP=467.705;RPPR=1225.55;RPR=214;RUN=1;SAF=214;SAP=467.705;SAR=0;SRF=563;SRP=1225.55;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:157:136,20:136:5498:20:802:-25.3465,0,-447.473 0/1:158:126,32:126:5098:32:1264:-66.4595,0,-411.096 0/1:106:80,26:80:3223:26:1025:-60.6195,0,-258.21 0/1:154:93,61:93:3726:61:2440:-173.379,0,-288.974 0/1:74:53,21:53:2163:21:843:-53.905,0,-172.552 0/1:129:75,54:75:3011:54:2127:-152.768,0,-232.233 dDocent_Contig_9853 36 . G C 202.604 . AB=0.166667;ABP=84.0786;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=223;DPB=223;DPRA=1.0274;EPP=37.7539;EPPR=452.505;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.375;PAIREDR=0.468599;PAO=0;PQA=0;PQR=0;PRO=0;QA=615;QR=8153;RO=207;RPL=0;RPP=37.7539;RPPR=452.505;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=207;SRP=452.505;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:43:36,7:36:1411:7:274:-12.079,0,-114.305 0/0:40:39,1:39:1555:1:41:0,-7.94663,-136.095 0/0:19:19,0:19:746:0:0:0,-5.71957,-67.4632 0/0:54:54,0:54:2126:0:0:0,-16.2556,-191.53 0/0:26:25,1:25:992:1:40:0,-3.8311,-85.5787 0/1:41:34,7:34:1323:7:260:-11.4032,0,-106.991 dDocent_Contig_9854 52 . C T 1572.64 . AB=0.250909;ABP=151.215;AC=4;AF=0.333333;AN=12;AO=74;CIGAR=1X;DP=424;DPB=424;DPRA=0;EPP=163.699;EPPR=763.026;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.445946;PAIREDR=0.508571;PAO=0;PQA=0;PQR=0;PRO=0;QA=2898;QR=14048;RO=350;RPL=74;RPP=163.699;RPPR=763.026;RPR=0;RUN=1;SAF=74;SAP=163.699;SAR=0;SRF=350;SRP=763.026;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:40,14:40:1600:14:529:-31.6808,0,-127.979 0/1:96:71,25:71:2829:25:992:-60.6774,0,-225.813 0/1:58:39,19:39:1577:19:764:-51.6211,0,-124.704 0/1:67:56,11:56:2265:11:448:-20.507,0,-183.84 0/0:75:74,1:74:2980:1:31:0,-19.4778,-265.176 0/0:74:70,4:70:2797:4:134:0,-9.89093,-239.452 dDocent_Contig_9855 155 . T C 846.36 . AB=0.483871;ABP=3.15039;AC=1;AF=0.1;AN=10;AO=30;CIGAR=1X;DP=302;DPB=302;DPRA=1.03333;EPP=68.1545;EPPR=593.651;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1159;QR=10538;RO=272;RPL=0;RPP=68.1545;RPPR=593.651;RPR=30;RUN=1;SAF=0;SAP=68.1545;SAR=30;SRF=0;SRP=593.651;SRR=272;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:62:32,30:32:1248:30:1159:-85.937,0,-93.935 0/0:87:87,0:87:3350:0:0:0,-26.1896,-301.582 0/0:47:47,0:47:1841:0:0:0,-14.1484,-165.909 0/0:62:62,0:62:2412:0:0:0,-18.6639,-217.257 0/0:44:44,0:44:1687:0:0:0,-13.2453,-152.068 ./.:.:.:.:.:.:.:. dDocent_Contig_9857 12 . C T 971.869 . AB=0.275168;ABP=68.4314;AC=2;AF=0.166667;AN=12;AO=46;CIGAR=1X;DP=467;DPB=467;DPRA=1.32422;EPP=102.898;EPPR=915.029;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.969048;PAO=0;PQA=0;PQR=0;PRO=0;QA=1809;QR=16590;RO=420;RPL=0;RPP=102.898;RPPR=915.029;RPR=46;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=420;SRP=915.029;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:71:45,25:45:1753:25:983:-67.5821,0,-136.812 0/0:33:33,0:33:1301:0:0:0,-9.93399,-117.359 0/0:105:102,3:102:4052:3:123:0,-20.1434,-353.191 0/0:85:83,2:83:3250:2:81:0,-17.9018,-284.895 0/1:78:62,16:62:2449:16:622:-32.8266,0,-197.084 0/0:95:95,0:95:3785:0:0:0,-28.5978,-340.654 dDocent_Contig_9858 47 . A T 67.7397 . AB=0.0948617;ABP=363.706;AC=1;AF=0.0833333;AN=12;AO=24;CIGAR=1X;DP=808;DPB=808;DPRA=2.27928;EPP=55.1256;EPPR=1705.44;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=935;QR=29970;RO=784;RPL=0;RPP=55.1256;RPPR=1705.44;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=784;SRP=1705.44;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:65:65,0:65:2464:0:0:0,-19.5669,-221.951 0/0:84:84,0:84:3167:0:0:0,-25.2865,-285.173 0/0:40:40,0:40:1548:0:0:0,-12.0412,-139.584 0/0:82:82,0:82:3142:0:0:0,-24.6845,-282.91 0/0:284:284,0:284:10832:0:0:0,-85.4925,-974.424 0/1:253:229,24:229:8817:24:935:-8.29684,0,-717.049 dDocent_Contig_9859 36 . C T 700.172 . AB=0.239437;ABP=86.7496;AC=3;AF=0.25;AN=12;AO=39;CIGAR=1X;DP=277;DPB=277;DPRA=3.49333;EPP=87.6977;EPPR=519.821;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1482;QR=9356;RO=238;RPL=0;RPP=87.6977;RPPR=519.821;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=238;SRP=519.821;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:57:41,16:41:1635:16:620:-38.9796,0,-130.221 0/1:39:26,13:26:995:13:507:-34.237,0,-78.0986 0/0:15:15,0:15:592:0:0:0,-4.51545,-53.615 0/0:59:55,4:55:2114:4:149:0,-3.9895,-176.667 0/0:61:60,1:60:2394:1:39:0,-14.4663,-211.721 0/1:46:41,5:41:1626:5:167:-1.50132,0,-132.73 dDocent_Contig_9860 98 . N C 37.0552 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=39;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:39:-3.70435,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_9861 9 . C T 111.114 . AB=0.151515;ABP=72.629;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=256;DPB=256;DPRA=1.03175;EPP=26.8965;EPPR=535.021;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.62449;PAO=0;PQA=0;PQR=0;PRO=0;QA=411;QR=9377;RO=245;RPL=0;RPP=26.8965;RPPR=535.021;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=245;SRP=535.021;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:39:33,6:33:1268:6:222:-8.59642,0,-102.671 0/0:64:63,1:63:2426:1:39:0,-15.3694,-214.647 0/0:14:14,0:14:512:0:0:0,-4.21442,-46.4108 0/0:69:69,0:69:2624:0:0:0,-20.7711,-236.353 0/1:27:23,4:23:890:4:150:-5.73686,0,-72.2906 0/0:43:43,0:43:1657:0:0:0,-12.9443,-149.391 dDocent_Contig_9862 28 . T G 240.628 . AB=0.571429;ABP=3.63072;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=319;DPB=319;DPRA=0.229508;EPP=20.3821;EPPR=678.338;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=8.67362e-19;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=327;QR=12368;RO=311;RPL=0;RPP=20.3821;RPPR=678.338;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=311;SRP=678.338;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:87:87,0:87:3459:0:0:0,-26.1896,-311.347 0/0:62:62,0:62:2462:0:0:0,-18.6639,-221.725 0/0:59:59,0:59:2376:0:0:0,-17.7608,-213.988 0/0:48:48,0:48:1881:0:0:0,-14.4494,-169.501 0/1:14:6,8:6:243:8:327:-25.5857,0,-18.0338 0/0:49:49,0:49:1947:0:0:0,-14.7505,-175.419 dDocent_Contig_9863 24 . A T 159.77 . AB=0.157143;ABP=74.4828;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=140;DPB=140;DPRA=2;EPP=26.8965;EPPR=283.13;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.790698;PAO=0;PQA=0;PQR=0;PRO=0;QA=439;QR=5030;RO=129;RPL=0;RPP=26.8965;RPPR=283.13;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=129;SRP=283.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:767:0:0:0,-6.0206,-69.3447 0/0:19:19,0:19:745:0:0:0,-5.71957,-67.3699 0/0:11:11,0:11:441:0:0:0,-3.31133,-40.0441 0/1:39:35,4:35:1372:4:159:-2.95158,0,-112.005 0/1:31:24,7:24:890:7:280:-16.2393,0,-71.0699 0/0:20:20,0:20:815:0:0:0,-6.0206,-73.6642 dDocent_Contig_9864 206 . T C 2456.81 . AB=0.440678;ABP=10.224;AC=4;AF=0.4;AN=10;AO=104;CIGAR=1M4I2M1X;DP=259;DPB=363;DPRA=2.56522;EPP=228.843;EPPR=337.417;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3584;QR=5966;RO=154;RPL=104;RPP=228.843;RPPR=337.417;RPR=0;RUN=1;SAF=0;SAP=228.843;SAR=104;SRF=0;SRP=337.417;SRR=154;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:47:21,26:21:833:26:899:-67.0774,0,-61.1402 0|1:59:28,31:28:1104:31:1060:-77.9483,0,-81.8937 0|1:68:38,30:38:1434:30:1044:-73.7998,0,-108.855 0|1:62:44,17:44:1705:17:581:-34.1563,0,-135.237 0|0:23:23,0:23:890:0:0:0,-6.92369,-80.4059 .:.:.:.:.:.:.:. dDocent_Contig_9865 94 . C T 353.708 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=521;DPB=521;DPRA=0.107843;EPP=26.8965;EPPR=1110.46;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=384;QR=17515;RO=510;RPL=11;RPP=26.8965;RPPR=1110.46;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=510;SRP=1110.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:213:213,0:213:7332:0:0:0,-64.1194,-659.982 0/0:68:68,0:68:2340:0:0:0,-20.47,-210.867 0/0:21:21,0:21:727:0:0:0,-6.32163,-65.7522 0/0:137:137,0:137:4706:0:0:0,-41.2411,-423.728 1/1:11:0,11:0:0:11:384:-34.8937,-3.31133,0 0/0:71:71,0:71:2410:0:0:0,-21.3731,-217.161 dDocent_Contig_9866 134 . C A 160.041 . AB=0.296296;ABP=12.7417;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=76;DPB=76;DPRA=3.22222;EPP=22.5536;EPPR=148.499;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=335;QR=2503;RO=67;RPL=0;RPP=22.5536;RPPR=148.499;RPR=9;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=148.499;SRR=67;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:14:11,3:11:420:3:105:-5.58072,0,-33.9379 0/0:5:5,0:5:191:0:0:0,-1.50515,-17.5584 0/0:31:30,1:30:1132:1:39:0,-5.43537,-98.281 0/1:13:8,5:8:295:5:191:-13.6451,0,-22.984 0/0:5:5,0:5:177:0:0:0,-1.50515,-16.2749 0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2629 dDocent_Contig_9867 20 . T C 61.9121 . AB=0.151515;ABP=37.8197;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1M1D3M1X;DP=375;DPB=371.667;DPRA=0.988095;EPP=46.4397;EPPR=769.54;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.399433;PAO=0;PQA=0;PQR=0;PRO=0;QA=768;QR=13921;RO=353;RPL=0;RPP=46.4397;RPPR=769.54;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=353;SRP=769.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:49:45,4:45:1785:4:152:0,-0.702206,-146.83 0|0:80:75,4:75:2930:4:154:0,-9.95468,-249.594 0|1:33:28,5:28:1111:5:192:-7.71392,0,-90.3463 0|0:87:79,7:79:3130:7:270:0,-1.49495,-257.148 0|0:49:49,0:49:1916:0:0:0,-14.7505,-172.656 0|0:77:77,0:77:3049:0:0:0,-23.1793,-274.517 dDocent_Contig_9868 49 . G A 340.234 . AB=0.104651;ABP=119.765;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=2X3M1X1M1X;DP=166;DPB=166;DPRA=1.59259;EPP=22.5536;EPPR=248.387;GTI=0;LEN=1;MEANALT=3.66667;MQM=22.3333;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=0;PAIREDR=0.778761;PAO=0;PQA=0;PQR=0;PRO=0;QA=300;QR=3809;RO=113;RPL=0;RPP=22.5536;RPPR=248.387;RPR=9;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=248.387;SRR=113;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:35:25,0,2,0,5,1:25:810:0,2,0,5,1:0,69,0,163,33:-4.49732,-12.0231,-77.3851,-6.83167,-72.1966,-71.5945,-12.0231,-77.3851,-72.1966,-77.3851,0,-65.3565,-60.1682,-65.3565,-63.8513,-9.37602,-74.7398,-69.5513,-74.7398,-62.7113,-74.4387 0|1:11:6,0,0,3,1,1:6:205:0,0,3,1,1:0,0,105,35,35:-3.35592,-5.1621,-21.8354,-5.1621,-21.8354,-21.8354,0,-16.6316,-16.6316,-15.7285,-2.29597,-18.9838,-18.9838,-13.7829,-18.6828,-2.2987,-18.9865,-18.9865,-13.7856,-16.1342,-18.6855 0|0:18:18,0,0,0,0,0:18:606:0,0,0,0,0:0,0,0,0,0:0,-5.41854,-54.8578,-5.41854,-54.8578,-54.8578,-5.41854,-54.8578,-54.8578,-54.8578,-5.41854,-54.8578,-54.8578,-54.8578,-54.8578,-5.41854,-54.8578,-54.8578,-54.8578,-54.8578,-54.8578 0|0:53:35,2,1,2,2,9:35:1201:2,1,2,2,9:52,29,58,62,306:-14.0858,-20.9533,-117.89,-22.3852,-116.255,-119.627,-21.7371,-115.599,-117.035,-118.67,-19.6442,-113.516,-114.952,-114.296,-116.587,0,-93.9029,-95.3385,-94.6833,-92.5993,-94.8661 0|0:27:17,4,0,0,0,5:17:576:4,0,0,0,5:138,0,0,0,175:-8.73287,-2.80257,-48.3012,-13.8504,-49.5053,-60.5542,-13.8504,-49.5053,-60.5542,-60.5542,-13.8504,-49.5053,-60.5542,-60.5542,-60.5542,0,-35.654,-46.7029,-46.7029,-46.7029,-45.1978 0|0:22:12,0,0,4,0,6:12:411:0,0,4,0,6:0,0,137,0,202:-12.5691,-16.1814,-49.5752,-16.1814,-49.5752,-49.5752,-9.26057,-42.6327,-42.6327,-41.4285,-16.1814,-49.5752,-49.5752,-42.6327,-49.5752,0,-33.4518,-33.4518,-26.5178,-33.4518,-31.6456 dDocent_Contig_9870 23 . G A 1165.41 . AB=0.333333;ABP=37.03;AC=5;AF=0.416667;AN=12;AO=47;CIGAR=1X;DP=160;DPB=160;DPRA=1.48421;EPP=105.07;EPPR=248.387;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.957447;PAIREDR=0.840708;PAO=0;PQA=0;PQR=0;PRO=0;QA=1849;QR=4474;RO=113;RPL=0;RPP=105.07;RPPR=248.387;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=113;SRP=248.387;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:13,15:13:510:15:583:-44.3798,0,-37.8161 0/1:34:30,4:30:1208:4:158:-4.36495,0,-98.7582 0/1:19:9,10:9:360:10:397:-30.3689,0,-27.0426 0/1:31:22,9:22:881:9:350:-22.5246,0,-70.2671 0/0:19:19,0:19:745:0:0:0,-5.71957,-67.3699 0/1:29:20,9:20:770:9:361:-24.124,0,-60.8748 dDocent_Contig_9871 29 . A G 162.138 . AB=0.136364;ABP=129.351;AC=4;AF=0.333333;AN=12;AO=15;CIGAR=1X;DP=154;DPB=154;DPRA=1.25;EPP=35.5824;EPPR=304.845;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.834532;PAO=0;PQA=0;PQR=0;PRO=0;QA=599;QR=5560;RO=139;RPL=0;RPP=35.5824;RPPR=304.845;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=139;SRP=304.845;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:29:23,6:23:923:6:241:-13.3364,0,-74.6461 0/1:22:19,3:19:773:3:119:-4.47235,0,-63.2666 0/1:38:34,4:34:1369:4:163:-3.61929,0,-112.027 0/0:25:25,0:25:993:0:0:0,-7.52575,-89.6692 0/0:19:19,0:19:753:0:0:0,-5.71957,-68.0896 0/1:21:19,2:19:749:2:76:-0.892627,0,-61.4061 dDocent_Contig_9872 75 . A G 1402.07 . AB=0.186047;ABP=39.8243;AC=0;AF=0;AN=12;AO=8;CIGAR=1X2M1X;DP=439;DPB=439;DPRA=0.387387;EPP=20.3821;EPPR=739.139;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.660767;PAO=0;PQA=0;PQR=0;PRO=0;QA=279;QR=11675;RO=339;RPL=4;RPP=3.0103;RPPR=60.8201;RPR=4;RUN=1;SAF=4;SAP=3.0103;SAR=4;SRF=217;SRP=60.8201;SRR=122;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:80:56,0,24:56:1929:0,24:0,775:-45.9693,-62.827,-219.527,0,-157.029,-149.805 0|0:111:102,0,8:102:3479:0,8:0,270:0,-30.7051,-313.024,-8.58345,-291.14,-288.732 0|0:43:23,8,12:23:789:8,12:279,405:-25.8947,-10.1218,-71.7768,0,-41.3618,-60.443 0|0:88:66,0,22:66:2285:0,22:0,707:-37.4419,-57.3099,-243.029,0,-186.046,-179.424 0|0:68:58,0,10:58:2020:0,10:0,340:-10.4594,-27.9191,-192.195,0,-164.617,-161.607 0|0:49:34,0,15:34:1173:0,15:0,490:-29.6631,-39.8981,-135.205,0,-95.6392,-91.1238 dDocent_Contig_9873 10 . A G 2029.81 . AB=0.2;ABP=10.8276;AC=0;AF=0;AN=12;AO=2;CIGAR=1X2M1X;DP=295;DPB=295;DPRA=0;EPP=7.35324;EPPR=437.305;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.98;PAO=0;PQA=0;PQR=0;PRO=0;QA=77;QR=7616;RO=200;RPL=0;RPP=7.35324;RPPR=437.305;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=200;SRP=437.305;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:38:22,0,0,16:22:833:0,0,16:0,0,606:-43.4368,-50.0594,-118.349,-50.0594,-118.349,-118.349,0,-68.6678,-68.6678,-63.8513 0|0:42:21,0,3,18:21:787:0,3,18:0,111,693:-50.5919,-56.9135,-121.366,-47.835,-112.286,-111.383,0,-64.4604,-55.3803,-59.0418 0|0:10:4,2,0,4:4:155:2,0,4:77,0,155:-11.5317,-6.41424,-18.5463,-12.7358,-19.1484,-25.4703,0,-6.41424,-12.7358,-11.5317 0|0:49:34,0,1,13:34:1289:0,1,13:0,38,505:-31.2656,-41.5007,-147.181,-38.3847,-144.065,-143.764,0,-105.681,-102.565,-101.768 0|0:45:33,0,0,12:33:1272:0,0,12:0,0,465:-28.6555,-38.5895,-143.041,-38.5895,-143.041,-143.041,0,-104.838,-104.838,-101.225 0|0:111:86,0,0,24:86:3280:0,0,24:0,0,909:-48.7213,-74.6099,-343.693,-74.6099,-343.693,-343.693,0,-269.168,-269.168,-261.943 dDocent_Contig_9874 57 . T G 1402.68 . AB=0.369128;ABP=25.1768;AC=4;AF=0.333333;AN=12;AO=57;CIGAR=1X;DP=357;DPB=357;DPRA=0.380488;EPP=126.784;EPPR=654.452;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.0350877;PAIREDR=0.64;PAO=0;PQA=0;PQR=0;PRO=0;QA=2203;QR=12022;RO=300;RPL=57;RPP=126.784;RPPR=654.452;RPR=0;RUN=1;SAF=57;SAP=126.784;SAR=0;SRF=300;SRP=654.452;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:14,7:14:568:7:274:-18.7055,0,-45.1406 0/1:31:26,5:26:1047:5:198:-8.86507,0,-85.1887 0/1:35:18,17:18:724:17:660:-49.1923,0,-54.9472 0/1:62:36,26:36:1437:26:990:-70.7271,0,-110.913 0/0:123:123,0:123:4959:0:0:0,-37.0267,-446.181 0/0:85:83,2:83:3287:2:81:0,-17.9018,-288.214 dDocent_Contig_9875 18 . A G 2463.04 . AB=0.376984;ABP=36.1339;AC=6;AF=0.5;AN=12;AO=95;CIGAR=1X;DP=252;DPB=252;DPRA=0;EPP=209.3;EPPR=343.931;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.4;PAIREDR=0.44586;PAO=0;PQA=0;PQR=0;PRO=0;QA=3683;QR=6220;RO=157;RPL=0;RPP=209.3;RPPR=343.931;RPR=95;RUN=1;SAF=95;SAP=209.3;SAR=0;SRF=157;SRP=343.931;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:48:34,14:34:1365:14:553:-35.6629,0,-108.658 0/1:57:25,32:25:973:32:1261:-96.6051,0,-70.7024 0/1:31:21,10:21:838:10:398:-26.846,0,-66.4001 0/1:59:38,21:38:1484:21:837:-57.8835,0,-116.05 0/1:25:19,6:19:762:6:186:-9.5116,0,-61.3755 0/1:32:20,12:20:798:12:448:-31.017,0,-62.5028 dDocent_Contig_9876 93 . G A 392.082 . AB=0.186567;ABP=117.353;AC=3;AF=0.25;AN=12;AO=29;CIGAR=1X;DP=255;DPB=255;DPRA=1.77679;EPP=6.67934;EPPR=6.49431;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.344828;PAIREDR=0.595556;PAO=0;PQA=0;PQR=0;PRO=0;QA=1069;QR=8311;RO=225;RPL=29;RPP=65.983;RPPR=491.592;RPR=0;RUN=1;SAF=11;SAP=6.67934;SAR=18;SRF=103;SRP=6.49431;SRR=122;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:39,0:39:1438:0:0:0,-11.7402,-129.686 0/1:62:55,6:55:2034:6:222:-1.78283,0,-164.751 0/0:17:17,0:17:626:0:0:0,-5.11751,-56.6645 0/0:65:61,4:61:2254:4:143:0,-6.34678,-189.844 0/1:35:31,4:31:1155:4:151:-3.4213,0,-93.696 0/1:37:22,15:22:804:15:553:-38.9644,0,-61.5268 dDocent_Contig_9877 54 . A G 513.183 . AB=0.255556;ABP=49.7211;AC=3;AF=0.25;AN=12;AO=24;CIGAR=1X;DP=168;DPB=168;DPRA=3.7;EPP=55.1256;EPPR=315.702;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.958333;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=952;QR=5700;RO=144;RPL=24;RPP=55.1256;RPPR=315.702;RPR=0;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=144;SRP=315.702;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:58:57,1:57:2267:1:35:0,-13.9611,-200.705 0/1:60:52,8:52:2096:8:317:-10.833,0,-170.755 0/0:8:8,0:8:291:0:0:0,-2.40824,-26.529 0/1:21:13,8:13:497:8:318:-22.6634,0,-38.7449 0/0:12:12,0:12:467:0:0:0,-3.61236,-42.375 0/1:9:2,7:2:82:7:282:-23.0437,0,-5.07041 dDocent_Contig_9878 27 . A T 333.366 . AB=0.327586;ABP=17.986;AC=4;AF=0.333333;AN=12;AO=19;CIGAR=1X;DP=106;DPB=106;DPRA=0.604167;EPP=44.2683;EPPR=191.928;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.631579;PAIREDR=0.689655;PAO=0;PQA=0;PQR=0;PRO=0;QA=630;QR=3261;RO=87;RPL=0;RPP=44.2683;RPPR=191.928;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=87;SRP=191.928;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1017:0:0:0,-8.12781,-91.8331 0/1:22:15,7:15:557:7:242:-15.4943,0,-43.8341 0/1:11:8,3:8:301:3:104:-6.39149,0,-24.133 0/0:21:21,0:21:788:0:0:0,-6.32163,-71.2399 0/1:4:1,3:1:39:3:97:-7.84578,0,-2.69244 0/1:21:15,6:15:559:6:187:-10.8125,0,-44.323 dDocent_Contig_9879 30 . T C 3716.96 . AB=0.00396825;ABP=1080.13;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=25M1X6M3I5M;DP=1812;DPB=1765.92;DPRA=4.5;EPP=7.35324;EPPR=752.168;GTI=0;LEN=1;MEANALT=23;MQM=60;MQMR=60;NS=6;NUMALT=6;ODDS=0;PAIRED=1;PAIREDR=1;PAO=13.7143;PQA=546.714;PQR=558.714;PRO=14.1143;QA=76;QR=13491;RO=345;RPL=0;RPP=7.35324;RPPR=752.168;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=345;SRP=752.168;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:199:58,0,14,0,29,0,3:58:2264:0,14,0,29,0,3:0,539,0,986,0,114:-62.4847,-79.9445,-266.061,-35.6959,-221.813,-217.598,-79.9445,-266.061,-221.813,-266.061,0,-186.113,-141.866,-186.113,-177.383,-79.9445,-266.061,-221.813,-266.061,-186.113,-266.061,-70.595,-256.711,-212.463,-256.711,-176.764,-256.711,-255.808 0|1:309:45,35,4,0,0,24,26:45:1767:35,4,0,0,24,26:1303,152,0,0,874,987:-93.0844,0,-134.795,-94.1653,-132.865,-238.292,-106.631,-145.331,-239.496,-251.962,-106.631,-145.331,-239.496,-251.962,-251.962,-35.2502,-73.9504,-168.115,-180.581,-180.581,-173.356,-25.6945,-64.3947,-158.56,-171.025,-171.025,-99.6448,-163.199 0|0:112:57,0,0,0,2,0,0:57:2236:0,0,0,2,0,0:0,0,0,65,0,0:0,-17.1587,-201.038,-17.1587,-201.038,-201.038,-17.1587,-201.038,-201.038,-201.038,-11.9169,-195.794,-195.794,-195.794,-195.192,-17.1587,-201.038,-201.038,-201.038,-195.794,-201.038,-17.1587,-201.038,-201.038,-201.038,-195.794,-201.038,-201.038 0|0:283:154,0,0,0,20,1,6:154:6007:0,0,0,20,1,6:0,0,0,758,37,215:-15.7897,-62.1483,-555.919,-62.1483,-555.919,-555.919,-62.1483,-555.919,-555.919,-555.919,0,-493.771,-493.771,-493.771,-487.751,-59.1214,-552.892,-552.892,-552.892,-490.744,-552.591,-44.6175,-538.388,-538.388,-538.388,-476.24,-535.361,-536.582 0|0:405:21,0,0,0,0,50,0:21:825:0,0,0,0,50,0:0,0,0,0,1853,0:-145.284,-151.606,-219.463,-151.606,-219.463,-219.463,-151.606,-219.463,-219.463,-219.463,-151.606,-219.463,-219.463,-219.463,-219.463,0,-67.857,-67.857,-67.857,-67.857,-52.8055,-151.606,-219.463,-219.463,-219.463,-219.463,-67.857,-219.463 0|0:504:10,0,0,2,0,10,23:10:392:0,0,2,0,10,23:0,0,76,0,380,825:-64.2684,-67.2787,-99.5149,-67.2787,-99.5149,-99.5149,-61.0457,-93.2818,-93.2818,-92.6798,-67.2787,-99.5149,-99.5149,-93.2818,-99.5149,-36.1141,-68.3502,-68.3502,-62.1172,-68.3502,-65.3399,0,-32.2361,-32.2361,-26.0031,-32.2361,-1.07151,-25.3124 dDocent_Contig_9881 1 . N G 77.8076 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_9882 51 . A G 809.904 . AB=0.264286;ABP=70.5741;AC=6;AF=0.5;AN=12;AO=37;CIGAR=1X;DP=140;DPB=140;DPRA=0;EPP=83.3548;EPPR=226.672;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1468;QR=4052;RO=103;RPL=37;RPP=83.3548;RPPR=226.672;RPR=0;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=103;SRP=226.672;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:10:6,4:6:240:4:155:-11.3132,0,-18.9642 0/1:16:9,7:9:340:7:271:-19.9391,0,-26.1272 0/1:37:30,7:30:1195:7:277:-14.1616,0,-96.689 0/1:24:16,8:16:599:8:321:-22.0332,0,-47.0022 0/1:30:23,7:23:916:7:282:-16.7219,0,-73.7151 0/1:23:19,4:19:762:4:162:-8.04327,0,-61.9782 dDocent_Contig_9883 16 . T C 4153.51 . AB=0.546154;ABP=7.82095;AC=6;AF=0.5;AN=12;AO=142;CIGAR=1X2M1X;DP=260;DPB=260;DPRA=0;EPP=311.359;EPPR=259.244;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.887324;PAIREDR=0.864407;PAO=0;PQA=0;PQR=0;PRO=0;QA=5589;QR=4621;RO=118;RPL=0;RPP=311.359;RPPR=259.244;RPR=142;RUN=1;SAF=142;SAP=311.359;SAR=0;SRF=118;SRP=259.244;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:41:27,14:27:1061:14:558:-38.2216,0,-83.4424 0|1:52:35,17:35:1369:17:666:-44.6174,0,-107.822 0|1:18:3,15:3:121:15:582:-47.2979,0,-5.86166 0|1:50:16,34:16:605:34:1353:-106.983,0,-39.7247 0|1:45:20,25:20:797:25:977:-74.6815,0,-58.5052 0|1:54:17,37:17:668:37:1453:-114.772,0,-44.1961 dDocent_Contig_9884 18 . C A 867.067 . AB=0.237838;ABP=113.45;AC=3;AF=0.25;AN=12;AO=55;CIGAR=1X;DP=806;DPB=806;DPRA=0.463374;EPP=122.441;EPPR=1631.61;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2049;QR=28747;RO=750;RPL=0;RPP=122.441;RPPR=1631.61;RPR=55;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=750;SRP=1631.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:87:80,7:80:3083:7:266:0,-1.88772,-253.32 0/1:69:48,21:48:1830:21:783:-50.0235,0,-144.177 0/1:48:39,9:39:1503:9:335:-16.0517,0,-121.09 0/1:68:54,14:54:2067:14:511:-25.8532,0,-165.792 0/0:291:286,4:286:10943:4:154:0,-73.4539,-970.204 0/0:243:243,0:243:9321:0:0:0,-73.1503,-838.58 dDocent_Contig_9885 92 . G T 173.873 . AB=0.421053;ABP=4.03889;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=53;DPB=53;DPRA=4.23529;EPP=22.5536;EPPR=98.5551;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.977273;PAO=0;PQA=0;PQR=0;PRO=0;QA=305;QR=1495;RO=44;RPL=9;RPP=22.5536;RPPR=98.5551;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=44;SRP=98.5551;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:5:5,0:5:172:0:0:0,-1.50515,-15.8183 0/0:1:1,0:1:35:0:0:0,-0.30103,-3.49863 0/0:6:6,0:6:208:0:0:0,-1.80618,-19.0596 0/0:5:5,0:5:175:0:0:0,-1.50515,-16.0937 0/1:19:11,8:11:361:8:270:-18.9097,0,-27.0881 0/0:17:16,1:16:544:1:35:0,-1.61888,-45.7842 dDocent_Contig_9886 87 . G A 921.78 . AB=0.316547;ABP=43.6434;AC=2;AF=0.166667;AN=12;AO=44;CIGAR=1X;DP=373;DPB=373;DPRA=1.18803;EPP=10.1169;EPPR=65.1118;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.25;PAIREDR=0.455927;PAO=0;PQA=0;PQR=0;PRO=0;QA=1518;QR=11409;RO=329;RPL=44;RPP=98.5551;RPPR=717.425;RPR=0;RUN=1;SAF=28;SAP=10.1169;SAR=16;SRF=213;SRP=65.1118;SRR=116;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:90:90,0:90:3094:0:0:0,-27.0927,-278.683 0/0:83:83,0:83:2866:0:0:0,-24.9855,-258.172 0/0:11:11,0:11:401:0:0:0,-3.31133,-36.4339 0/0:50:50,0:50:1726:0:0:0,-15.0515,-155.618 0/1:60:35,25:35:1240:25:864:-60.0109,0,-93.8382 0/1:79:60,19:60:2082:19:654:-35.3889,0,-163.87 dDocent_Contig_9887 82 . T C 412.754 . AB=0.283582;ABP=30.2671;AC=1;AF=0.0833333;AN=12;AO=31;CIGAR=1X;DP=391;DPB=391;DPRA=0.820946;EPP=3.64073;EPPR=5.67776;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.709677;PAIREDR=0.409471;PAO=0;PQA=0;PQR=0;PRO=0;QA=1127;QR=12113;RO=359;RPL=31;RPP=70.3259;RPPR=782.569;RPR=0;RUN=1;SAF=14;SAP=3.64073;SAR=17;SRF=169;SRP=5.67776;SRR=190;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:64:60,4:60:2023:4:139:0,-6.4136,-169.471 0/1:67:48,19:48:1579:19:696:-42.7983,0,-122.206 0/0:48:45,3:45:1565:3:112:0,-4.00314,-130.681 0/0:64:58,5:58:1963:5:180:0,-2.53221,-160.414 0/0:68:68,0:68:2211:0:0:0,-20.47,-199.228 0/0:80:80,0:80:2772:0:0:0,-24.0824,-249.703 dDocent_Contig_9888 34 . A G 288.224 . AB=0.197531;ABP=67.377;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1X;DP=424;DPB=424;DPRA=0.915789;EPP=52.9542;EPPR=873.771;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=900;QR=15875;RO=401;RPL=0;RPP=52.9542;RPPR=873.771;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=401;SRP=873.771;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:31,5:31:1231:5:201:-7.63344,0,-100.23 0/0:62:59,3:59:2326:3:119:0,-7.56936,-198.41 0/0:102:100,2:100:3981:2:81:0,-23.0193,-350.586 0/1:45:34,11:34:1351:11:418:-24.4108,0,-108.308 0/0:103:101,2:101:3989:2:81:0,-23.3204,-351.318 0/0:76:76,0:76:2997:0:0:0,-22.8783,-269.835 dDocent_Contig_9889 22 . G A 545.03 . AB=0.178378;ABP=169.228;AC=5;AF=0.416667;AN=12;AO=33;CIGAR=1X;DP=207;DPB=207;DPRA=1.68182;EPP=74.6689;EPPR=380.846;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.575758;PAIREDR=0.563218;PAO=0;PQA=0;PQR=0;PRO=0;QA=1306;QR=6929;RO=174;RPL=0;RPP=74.6689;RPPR=380.846;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=174;SRP=380.846;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:26,6:26:1014:6:244:-12.7059,0,-81.923 0/1:54:42,12:42:1691:12:455:-25.0247,0,-136.154 0/0:22:22,0:22:893:0:0:0,-6.62266,-80.6766 0/1:41:37,4:37:1453:4:161:-2.53325,0,-118.673 0/1:28:22,6:22:876:6:245:-14.0006,0,-70.7199 0/1:30:25,5:25:1002:5:201:-9.43962,0,-81.4436 dDocent_Contig_9890 9 . A G 766.622 . AB=0.116646;ABP=1053.55;AC=4;AF=0.333333;AN=12;AO=113;CIGAR=1X;DP=1183;DPB=1183;DPRA=0;EPP=248.387;EPPR=2315.64;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.8938;MQMR=59.2367;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0265487;PAIREDR=0.228251;PAO=0;PQA=0;PQR=0;PRO=0;QA=4322;QR=39779;RO=1069;RPL=0;RPP=248.387;RPPR=2324.31;RPR=113;RUN=1;SAF=113;SAP=248.387;SAR=0;SRF=1068;SRP=2315.64;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:232:203,28:203:7485:28:1059:-25.676,0,-603.625 0/1:218:197,21:197:7406:21:814:-7.91725,0,-589.47 0/1:147:134,13:134:5039:13:505:-1.54779,0,-402.821 0/1:226:192,34:192:7159:34:1289:-48.266,0,-571.336 0/0:194:185,9:185:6850:9:349:0,-26.6291,-580.942 0/0:166:158,8:158:5840:8:306:0,-22.0712,-484.759 dDocent_Contig_9891 9 . A G 498.907 . AB=0.229358;ABP=72.358;AC=2;AF=0.166667;AN=12;AO=29;CIGAR=1X;DP=306;DPB=306;DPRA=1.27907;EPP=65.983;EPPR=604.508;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.827586;PAIREDR=0.909747;PAO=0;PQA=0;PQR=0;PRO=0;QA=1099;QR=10475;RO=277;RPL=0;RPP=65.983;RPPR=604.508;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=277;SRP=604.508;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:60:44,16:44:1673:16:597:-36.0016,0,-132.77 0/0:66:65,1:65:2445:1:39:0,-15.9714,-216.364 0/1:49:40,9:40:1517:9:350:-17.1109,0,-122.053 0/0:45:42,3:42:1577:3:113:0,-3.00694,-131.662 0/0:36:36,0:36:1366:0:0:0,-10.8371,-123.225 0/0:50:50,0:50:1897:0:0:0,-15.0515,-170.974 dDocent_Contig_9893 27 . G A 3532.11 . AB=0.460377;ABP=6.62396;AC=4;AF=0.333333;AN=12;AO=123;CIGAR=1X;DP=408;DPB=408;DPRA=1.36923;EPP=270.101;EPPR=621.88;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.982456;PAO=0;PQA=0;PQR=0;PRO=0;QA=4920;QR=11342;RO=285;RPL=0;RPP=270.101;RPPR=621.88;RPR=123;RUN=1;SAF=123;SAP=270.101;SAR=0;SRF=285;SRP=621.88;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:65:34,31:34:1328:31:1230:-91.4077,0,-100.216 0/1:64:28,36:28:1121:36:1446:-111.12,0,-81.9042 0/1:47:27,20:27:1073:20:805:-58.6178,0,-82.7089 0/1:89:54,35:54:2160:35:1398:-99.2867,0,-167.785 0/0:52:52,0:52:2094:0:0:0,-15.6536,-188.632 0/0:91:90,1:90:3566:1:41:0,-23.2992,-316.885 dDocent_Contig_9895 22 . G T 205.227 . AB=0.128571;ABP=170.772;AC=2;AF=0.166667;AN=12;AO=18;CIGAR=1X;DP=373;DPB=373;DPRA=1.20172;EPP=42.0968;EPPR=773.883;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.940845;PAO=0;PQA=0;PQR=0;PRO=0;QA=724;QR=14143;RO=355;RPL=0;RPP=42.0968;RPPR=773.883;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=355;SRP=773.883;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:72:72,0:72:2899:0:0:0,-21.6742,-261.007 0/1:76:68,8:68:2682:8:324:-6.65091,0,-218.629 0/0:70:70,0:70:2738:0:0:0,-21.0721,-246.53 0/1:64:54,10:54:2177:10:400:-17.0936,0,-176.832 0/0:51:51,0:51:2034:0:0:0,-15.3525,-183.25 0/0:40:40,0:40:1613:0:0:0,-12.0412,-145.393 dDocent_Contig_9896 26 . C T 7648.03 . AB=0.487589;ABP=3.76493;AC=6;AF=0.5;AN=12;AO=275;CIGAR=1X;DP=564;DPB=564;DPRA=0;EPP=600.165;EPPR=630.566;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.476364;PAIREDR=0.408304;PAO=0;PQA=0;PQR=0;PRO=0;QA=10493;QR=11446;RO=289;RPL=0;RPP=600.165;RPPR=630.566;RPR=275;RUN=1;SAF=275;SAP=600.165;SAR=0;SRF=289;SRP=630.566;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:93:44,49:44:1772:49:1838:-137.663,0,-131.696 0/1:121:57,64:57:2234:64:2421:-181.638,0,-164.803 0/1:55:26,29:26:1009:29:1127:-85.1695,0,-74.536 0/1:74:40,34:40:1565:34:1331:-97.7895,0,-118.805 0/1:102:58,44:58:2290:44:1663:-119.208,0,-175.551 0/1:119:64,55:64:2576:55:2113:-154.557,0,-196.144 dDocent_Contig_9897 1 . N G 295.279 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=310;QR=0;RO=0;RPL=0;RPP=22.5536;RPPR=0;RPR=9;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:104:-9.70302,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:136:-12.575,-1.20412,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 dDocent_Contig_9898 14 . A T 412.269 . AB=0.223301;ABP=71.5066;AC=5;AF=0.416667;AN=12;AO=23;CIGAR=1X;DP=123;DPB=123;DPRA=1.03;EPP=52.9542;EPPR=220.158;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99;PAO=0;PQA=0;PQR=0;PRO=0;QA=881;QR=3875;RO=100;RPL=0;RPP=52.9542;RPPR=220.158;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=100;SRP=220.158;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:754:0:0:0,-6.0206,-68.1792 0/1:16:11,5:11:438:5:195:-13.1077,0,-34.9584 0/1:36:27,9:27:1063:9:338:-19.9363,0,-85.129 0/1:23:19,4:19:727:4:158:-7.67696,0,-58.8291 0/1:17:15,2:15:570:2:72:-1.71886,0,-46.5133 0/1:11:8,3:8:323:3:118:-7.69139,0,-26.1276 dDocent_Contig_9899 27 . A C 283.299 . AB=0.255319;ABP=27.4509;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=499;DPB=499;DPRA=0.605744;EPP=37.7539;EPPR=1051.83;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=58.824;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.975155;PAO=0;PQA=0;PQR=0;PRO=0;QA=647;QR=19266;RO=483;RPL=0;RPP=37.7539;RPPR=1051.83;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=483;SRP=1051.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:107:107,0:107:4205:0:0:0,-32.2102,-375.836 0/0:87:87,0:87:3513:0:0:0,-26.1896,-316.196 0/0:69:69,0:69:2759:0:0:0,-20.7711,-235.822 0/0:120:120,0:120:4818:0:0:0,-36.1236,-430.724 0/0:69:65,4:65:2611:4:162:0,-5.80411,-220.153 0/1:47:35,12:35:1360:12:485:-29.8528,0,-99.1596 dDocent_Contig_9900 159 . C A 365.128 . AB=0.375;ABP=8.43898;AC=3;AF=0.25;AN=12;AO=15;CIGAR=1X;DP=79;DPB=79;DPRA=1.02564;EPP=35.5824;EPPR=141.985;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=585;QR=2484;RO=64;RPL=15;RPP=35.5824;RPPR=141.985;RPR=0;RUN=1;SAF=0;SAP=35.5824;SAR=15;SRF=0;SRP=141.985;SRR=64;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:13:11,2:11:439:2:80:-3.67819,0,-35.9509 0/0:17:17,0:17:657:0:0:0,-5.11751,-59.4555 0/1:14:9,5:9:338:5:196:-13.7986,0,-26.5519 0/1:13:5,8:5:192:8:309:-24.2563,0,-13.7344 0/0:13:13,0:13:503:0:0:0,-3.91339,-45.6157 0/0:9:9,0:9:355:0:0:0,-2.70927,-32.3078 dDocent_Contig_9901 7 . A G 107.565 . AB=0.173913;ABP=24.253;AC=4;AF=0.333334;AN=12;AO=5;CIGAR=1X4M;DP=112;DPB=112;DPRA=0;EPP=13.8677;EPPR=207.129;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=142;QR=3544;RO=94;RPL=0;RPP=13.8677;RPPR=207.129;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=94;SRP=207.129;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:18:14,2,0,2:14:533:2,0,2:67,0,78:-2.22459,-1.04182,-44.1505,-6.43901,-44.7526,-50.172,0,-38.3399,-43.7588,-43.1567 0|1:28:21,6,0,1:21:784:6,0,1:200,0,41:-9.79845,0,-62.3483,-16.1201,-64.1545,-80.3311,-12.7251,-60.7688,-76.9454,-76.6444 0|1:7:6,0,1,0:6:216:0,1,0:0,39,0:-1.78935,-3.59553,-21.1921,0,-17.982,-17.6809,-3.59553,-21.1921,-17.982,-21.1921 0|1:19:17,2,0,0:17:634:2,0,0:73,0,0:-1.21113,0,-51.6724,-6.32864,-52.2745,-58.2375,-6.32864,-52.2745,-58.2375,-58.2375 0|0:24:23,0,1,0:23:883:0,1,0:0,10,0:0,-6.92369,-79.6792,-6.22472,-79.092,-78.791,-6.92369,-79.6792,-79.092,-79.6792 0|1:16:13,0,3,0:13:494:0,3,0:0,93,0:-3.85961,-7.773,-48.3426,0,-40.8926,-39.9895,-7.773,-48.3426,-40.8926,-48.3426 dDocent_Contig_9902 24 . T C 6612.33 . AB=0.049505;ABP=181.05;AC=0;AF=0;AN=12;AO=5;CIGAR=1X3M1I7M;DP=412;DPB=433.091;DPRA=0;EPP=13.8677;EPPR=393.875;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=0.8;PAIREDR=0.827778;PAO=0;PQA=0;PQR=0;PRO=0;QA=204;QR=6993;RO=180;RPL=0;RPP=13.8677;RPPR=393.875;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=180;SRP=393.875;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:31:11,1,19:11:433:1,19:41,749:-58.2934,-58.2198,-93.5398,0,-32.2209,-29.8867 0|0:70:37,4,29:37:1404:4,29:163,1150:-83.5131,-81.2026,-195.103,0,-101.639,-106.359 0|0:82:37,0,44:37:1450:0,44:0,1725:-130.718,-141.856,-261.092,0,-119.248,-106.002 0|0:80:48,0,32:48:1871:0,32:0,1263:-89.8636,-104.313,-258.095,0,-154.174,-144.541 0|0:87:31,0,56:31:1209:0,56:0,2133:-165.967,-175.299,-274.677,0,-99.7641,-82.9064 0|0:62:16,0,46:16:626:0,46:0,1806:-144.1,-148.917,-200.384,0,-51.8585,-38.0111 dDocent_Contig_9903 24 . G A 43.4985 . AB=0.104651;ABP=119.765;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=263;DPB=263;DPRA=1.93519;EPP=31.2394;EPPR=545.878;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.615385;PAIREDR=0.712;PAO=0;PQA=0;PQR=0;PRO=0;QA=519;QR=9974;RO=250;RPL=0;RPP=31.2394;RPPR=545.878;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=250;SRP=545.878;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:65:63,2:63:2533:2:79:0,-12.0697,-220.609 0/0:58:56,2:56:2237:2:78:0,-10.057,-194.095 0/1:30:26,4:26:1033:4:161:-5.844,0,-84.2303 0/1:56:51,5:51:1998:5:201:-1.61284,0,-163.147 0/0:32:32,0:32:1288:0:0:0,-9.63296,-116.184 0/0:22:22,0:22:885:0:0:0,-6.62266,-79.9581 dDocent_Contig_9904 9 . A T 1936.47 . AB=0.181669;ABP=540.8;AC=3;AF=0.25;AN=12;AO=122;CIGAR=1X;DP=1110;DPB=1110;DPRA=1.01311;EPP=267.93;EPPR=2144.08;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993915;PAO=0;PQA=0;PQR=0;PRO=0;QA=4660;QR=37447;RO=986;RPL=0;RPP=267.93;RPPR=2144.08;RPR=122;RUN=1;SAF=122;SAP=267.93;SAR=0;SRF=986;SRP=2144.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:177:171,5:171:6527:5:182:0,-36.394,-570.659 0/1:241:181,60:181:6901:60:2287:-133.494,0,-548.433 0/1:216:184,32:184:7005:32:1226:-45.6125,0,-565.311 0/1:154:135,19:135:5081:19:731:-19.7623,0,-410.96 0/0:183:182,0:182:6868:0:0:0,-54.7875,-617.914 0/0:139:133,6:133:5065:6:234:0,-20.4121,-434.441 dDocent_Contig_9905 19 . G T 6180.06 . AB=0.517413;ABP=4.06903;AC=6;AF=0.5;AN=12;AO=208;CIGAR=1X;DP=402;DPB=402;DPRA=0;EPP=454.677;EPPR=424.276;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.947115;PAIREDR=0.958763;PAO=0;PQA=0;PQR=0;PRO=0;QA=8319;QR=7683;RO=194;RPL=0;RPP=454.677;RPPR=424.276;RPR=208;RUN=1;SAF=208;SAP=454.677;SAR=0;SRF=194;SRP=424.276;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:55:16,39:16:609:39:1532:-121.566,0,-38.579 0/1:99:53,46:53:2091:46:1846:-136.544,0,-158.577 0/1:51:26,25:26:1044:25:1017:-76.4688,0,-78.9005 0/1:62:29,33:29:1134:33:1328:-101.118,0,-83.674 0/1:65:39,26:39:1556:26:1030:-73.425,0,-120.711 0/1:70:31,39:31:1249:39:1566:-120.105,0,-91.6057 dDocent_Contig_9906 20 . G T 1563.61 . AB=0.245955;ABP=176.229;AC=3;AF=0.25;AN=12;AO=76;CIGAR=1X;DP=499;DPB=499;DPRA=1.62632;EPP=168.042;EPPR=921.543;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2819;QR=16619;RO=423;RPL=0;RPP=168.042;RPPR=921.543;RPR=76;RUN=1;SAF=76;SAP=168.042;SAR=0;SRF=423;SRP=921.543;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:101:89,12:89:3486:12:422:-7.90093,0,-283.403 0/1:64:56,8:56:2217:8:287:-6.90556,0,-180.447 0/0:46:46,0:46:1839:0:0:0,-13.8474,-165.723 0/0:39:39,0:39:1499:0:0:0,-11.7402,-135.157 0/0:105:105,0:105:4123:0:0:0,-31.6081,-371.07 0/1:144:88,56:88:3455:56:2110:-146.776,0,-267.673 dDocent_Contig_9907 180 . C T 208.319 . AB=0.174419;ABP=82.1933;AC=3;AF=0.25;AN=12;AO=15;CIGAR=1X;DP=121;DPB=121;DPRA=2.45714;EPP=35.5824;EPPR=233.186;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=565;QR=3977;RO=106;RPL=15;RPP=35.5824;RPPR=233.186;RPR=0;RUN=1;SAF=0;SAP=35.5824;SAR=15;SRF=0;SRP=233.186;SRR=106;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:547:0:0:0,-4.51545,-49.5531 0/1:26:22,4:22:825:4:157:-6.68219,0,-66.7435 0/1:42:36,6:36:1373:6:219:-7.41643,0,-111.21 0/1:18:13,5:13:484:5:189:-11.955,0,-38.4839 0/0:17:17,0:17:631:0:0:0,-5.11751,-57.1157 0/0:3:3,0:3:117:0:0:0,-0.90309,-10.9104 dDocent_Contig_9908 31 . G A 50.933 . AB=0.125;ABP=61.6401;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=224;DPB=224;DPRA=1.36364;EPP=16.0391;EPPR=476.391;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.876147;PAO=0;PQA=0;PQR=0;PRO=0;QA=230;QR=8645;RO=218;RPL=0;RPP=16.0391;RPPR=476.391;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=218;SRP=476.391;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1190:0:0:0,-9.0309,-107.378 0/0:42:42,0:42:1684:0:0:0,-12.6433,-151.787 0/0:27:27,0:27:1069:0:0:0,-8.12781,-96.4969 0/0:28:28,0:28:1112:0:0:0,-8.42884,-100.368 0/1:48:42,6:42:1670:6:230:-6.61617,0,-136.077 0/0:49:49,0:49:1920:0:0:0,-14.7505,-173.013 dDocent_Contig_9909 127 . C T 365.536 . AB=0.278689;ABP=28.9612;AC=2;AF=0.2;AN=10;AO=17;CIGAR=1X;DP=118;DPB=118;DPRA=1.60526;EPP=39.9253;EPPR=222.329;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=639;QR=3820;RO=101;RPL=0;RPP=39.9253;RPPR=222.329;RPR=17;RUN=1;SAF=0;SAP=39.9253;SAR=17;SRF=0;SRP=222.329;SRR=101;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:12,10:12:446:10:380:-27.9317,0,-33.8591 0/0:10:10,0:10:388:0:0:0,-3.0103,-35.2779 0/1:39:32,7:32:1215:7:259:-11.9229,0,-97.9038 0/0:29:29,0:29:1090:0:0:0,-8.72987,-98.399 ./.:.:.:.:.:.:.:. 0/0:18:18,0:18:681:0:0:0,-5.41854,-61.6233 dDocent_Contig_9910 22 . T A 490.163 . AB=0.175;ABP=149.802;AC=2;AF=0.166667;AN=12;AO=33;CIGAR=1X;DP=361;DPB=361;DPRA=1.44086;EPP=74.6689;EPPR=715.253;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1307;QR=12737;RO=328;RPL=0;RPP=74.6689;RPPR=715.253;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=328;SRP=715.253;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:31,5:31:1217:5:197:-7.26695,0,-98.9744 0/0:64:60,4:60:2312:4:159:0,-4.57509,-193.568 0/1:124:101,23:101:3938:23:911:-44.9712,0,-317.129 0/0:44:43,1:43:1643:1:40:0,-9.24964,-144.112 0/0:43:43,0:43:1680:0:0:0,-12.9443,-151.444 0/0:50:50,0:50:1947:0:0:0,-15.0515,-175.453 dDocent_Contig_9911 1 . N G 118.005 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0.333333;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=119;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:78:-7.4033,-0.60206,0 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_9912 29 . T A 70.1238 . AB=0.121622;ABP=95.0338;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=358;DPB=358;DPRA=0.647436;EPP=35.5824;EPPR=747.825;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.970845;PAO=0;PQA=0;PQR=0;PRO=0;QA=590;QR=13746;RO=343;RPL=0;RPP=35.5824;RPPR=747.825;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=343;SRP=747.825;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:58:58,0:58:2318:0:0:0,-17.4597,-208.78 0/1:43:39,4:39:1582:4:159:-1.74715,0,-129.665 0/0:75:70,5:70:2814:5:196:0,-4.56332,-235.35 0/1:31:26,5:26:1048:5:194:-8.4966,0,-85.2772 0/0:98:98,0:98:3913:0:0:0,-29.5009,-352.17 0/0:53:52,1:52:2071:1:41:0,-11.86,-182.482 dDocent_Contig_9913 21 . C T 152.425 . AB=0.186047;ABP=39.8243;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=155;DPB=155;DPRA=1.48315;EPP=22.5536;EPPR=320.045;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.445205;PAO=0;PQA=0;PQR=0;PRO=0;QA=366;QR=5875;RO=146;RPL=0;RPP=22.5536;RPPR=320.045;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=146;SRP=320.045;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:799:0:0:0,-6.0206,-72.2235 0/0:17:17,0:17:689:0:0:0,-5.11751,-62.3395 0/0:26:26,0:26:1044:0:0:0,-7.82678,-94.2506 0/0:26:26,0:26:1033:0:0:0,-7.82678,-93.2568 0/0:23:22,1:22:893:1:40:0,-2.92801,-76.6804 0/1:43:35,8:35:1417:8:326:-16.7654,0,-114.83 dDocent_Contig_9914 10 . T A 373.839 . AB=0.246154;ABP=39.3908;AC=1;AF=0.0833333;AN=12;AO=35;CIGAR=1X;DP=579;DPB=579;DPRA=1.06486;EPP=79.0118;EPPR=1182.12;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.996317;PAO=0;PQA=0;PQR=0;PRO=0;QA=1416;QR=21604;RO=543;RPL=0;RPP=79.0118;RPPR=1182.12;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=543;SRP=1182.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:122:115,6:115:4589:6:244:0,-14.2295,-390.636 0/0:123:113,10:113:4502:10:404:0,-0.306839,-368.385 0/1:65:49,16:49:1964:16:646:-38.9065,0,-157.388 0/0:84:81,3:81:3181:3:122:0,-13.914,-274.995 0/0:121:121,0:121:4854:0:0:0,-36.4246,-436.751 0/0:64:64,0:64:2514:0:0:0,-19.2659,-226.403 dDocent_Contig_9915 9 . A G 2956.49 . AB=0.236088;ABP=361.757;AC=5;AF=0.416667;AN=12;AO=147;CIGAR=1X;DP=724;DPB=724;DPRA=0;EPP=322.217;EPPR=1255.95;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.353741;PAIREDR=0.329289;PAO=0;PQA=0;PQR=0;PRO=0;QA=5620;QR=22098;RO=577;RPL=0;RPP=322.217;RPPR=1255.95;RPR=147;RUN=1;SAF=147;SAP=322.217;SAR=0;SRF=577;SRP=1255.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:105:72,33:72:2765:33:1251:-81.2695,0,-217.425 0/1:130:109,21:109:4167:21:793:-32.5591,0,-335.977 0/1:61:49,12:49:1890:12:461:-23.4776,0,-151.982 0/1:144:90,54:90:3435:54:2077:-143.814,0,-265.941 0/1:153:133,20:133:5119:20:772:-23.7504,0,-414.661 0/0:131:124,7:124:4722:7:266:0,-15.1332,-400.726 dDocent_Contig_9917 9 . A T 126.038 . AB=0.0757576;ABP=106.188;AC=0;AF=0;AN=12;AO=10;CIGAR=1X2M1X4M2X3M;DP=397;DPB=397;DPRA=0.975845;EPP=24.725;EPPR=728.282;GTI=0;LEN=1;MEANALT=3;MQM=49.6;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.649701;PAO=0;PQA=0;PQR=0;PRO=0;QA=319;QR=12511;RO=334;RPL=0;RPP=24.725;RPPR=728.282;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=334;SRP=728.282;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:63:49,0,2,11:49:1825:0,2,11:0,75,436:0,-14.7505,-164.275,-8.57723,-158.131,-157.529,-1.21866,-150.69,-144.546,-147.378 0|0:75:62,0,4,9:62:2333:0,4,9:0,155,355:0,-18.6639,-209.923,-5.86967,-197.188,-195.983,-6.03088,-197.177,-184.442,-194.468 0|0:63:60,1,0,2:60:2236:1,0,2:39,0,78:0,-14.8519,-197.59,-18.0618,-197.891,-201.095,-11.9776,-191.795,-194.999,-194.397 0|0:73:64,4,0,5:64:2398:4,0,5:110,0,196:0,-11.1073,-206.415,-19.2659,-207.619,-215.77,-9.33063,-197.69,-205.839,-204.334 0|0:57:48,0,9,0:48:1804:0,9,0:0,352,0:-11.597,-26.0465,-173.862,0,-148.17,-145.461,-26.0465,-173.862,-148.17,-173.862 0|0:66:51,5,7,0:51:1915:5,7,0:170,277,0:-4.22815,-5.79548,-161.231,0,-143.185,-154.847,-19.5807,-162.736,-156.955,-176.506 dDocent_Contig_9918 32 . C T 54.4962 . AB=0.169811;ABP=53.2;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=249;DPB=249;DPRA=1.74436;EPP=26.8965;EPPR=519.821;GTI=0;LEN=1;MEANALT=1;MQM=32.3636;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.945378;PAO=0;PQA=0;PQR=0;PRO=0;QA=405;QR=9432;RO=238;RPL=0;RPP=26.8965;RPPR=519.821;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=238;SRP=519.821;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:915:0:0:0,-6.92369,-82.6536 0/1:53:44,9:44:1745:9:326:-6.9725,0,-141.316 0/0:29:29,0:29:1151:0:0:0,-8.72987,-103.873 0/0:25:25,0:25:980:0:0:0,-7.52575,-88.4985 0/0:63:61,2:61:2415:2:79:0,-12.1879,-210.728 0/0:56:56,0:56:2226:0:0:0,-16.8577,-200.514 dDocent_Contig_9919 13 . G C 7516.51 . AB=0.387413;ABP=81.733;AC=6;AF=0.5;AN=12;AO=277;CIGAR=1X;DP=715;DPB=715;DPRA=0;EPP=604.508;EPPR=951.944;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.9711;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.99639;PAIREDR=0.995423;PAO=0;PQA=0;PQR=0;PRO=0;QA=10852;QR=17229;RO=437;RPL=0;RPP=604.508;RPPR=951.944;RPR=277;RUN=1;SAF=277;SAP=604.508;SAR=0;SRF=437;SRP=951.944;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:108:81,27:81:3210:27:1077:-64.7027,0,-256.469 0/1:94:65,28:65:2590:28:1060:-67.4914,0,-205.045 0/1:98:66,32:66:2624:32:1272:-85.255,0,-206.798 0/1:94:58,36:58:2243:36:1399:-97.8681,0,-173.748 0/1:133:40,93:40:1554:93:3670:-290.316,0,-100.061 0/1:188:127,61:127:5008:61:2374:-157.24,0,-394.041 dDocent_Contig_9920 109 . C T 875.782 . AB=0.528571;ABP=3.50664;AC=2;AF=0.166667;AN=12;AO=37;CIGAR=1X;DP=102;DPB=102;DPRA=4.375;EPP=83.3548;EPPR=144.156;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1236;QR=2144;RO=65;RPL=0;RPP=83.3548;RPPR=144.156;RPR=37;RUN=1;SAF=0;SAP=83.3548;SAR=37;SRF=0;SRP=144.156;SRR=65;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:8:8,0:8:265:0:0:0,-2.40824,-24.1733 0/0:8:8,0:8:269:0:0:0,-2.40824,-24.5378 0/0:9:9,0:9:307:0:0:0,-2.70927,-27.9617 0/0:7:7,0:7:243:0:0:0,-2.10721,-22.2088 0/1:31:8,23:8:264:23:760:-59.375,0,-14.7502 0/1:39:25,14:25:796:14:476:-31.425,0,-60.1962 dDocent_Contig_9921 56 . G A 545.645 . AB=0.333333;ABP=18.9344;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X;DP=134;DPB=134;DPRA=1.94118;EPP=50.7827;EPPR=246.215;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.991071;PAO=0;PQA=0;PQR=0;PRO=0;QA=855;QR=4432;RO=112;RPL=22;RPP=50.7827;RPPR=246.215;RPR=0;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=112;SRP=246.215;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:357:0:0:0,-2.70927,-32.4909 0/0:23:23,0:23:886:0:0:0,-6.92369,-80.0448 0/0:17:17,0:17:671:0:0:0,-5.11751,-60.7197 0/0:19:19,0:19:768:0:0:0,-5.71957,-69.4409 0/1:37:22,15:22:865:15:575:-40.9455,0,-67.0218 0/1:29:22,7:22:885:7:280:-16.8408,0,-71.2295 dDocent_Contig_9922 9 . A G 1120.84 . AB=0.224;ABP=168.424;AC=4;AF=0.333333;AN=12;AO=59;CIGAR=1X;DP=332;DPB=332;DPRA=0;EPP=131.127;EPPR=595.822;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996337;PAO=0;PQA=0;PQR=0;PRO=0;QA=2245;QR=10382;RO=273;RPL=0;RPP=131.127;RPPR=595.822;RPR=59;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=273;SRP=595.822;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:32,2:32:1227:2:67:0,-3.87294,-104.363 0/1:45:40,5:40:1530:5:182:-3.18592,0,-124.428 0/1:120:94,26:94:3587:26:997:-53.9174,0,-286.832 0/1:55:33,22:33:1238:22:849:-60.1751,0,-95.1536 0/0:48:47,1:47:1777:1:37:0,-10.7516,-156.484 0/1:30:27,3:27:1023:3:113:-1.50807,0,-83.3453 dDocent_Contig_9923 36 . G A 260.284 . AB=0.25;ABP=26.8965;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=189;DPB=189;DPRA=1.5;EPP=31.2394;EPPR=385.189;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=527;QR=6825;RO=176;RPL=0;RPP=31.2394;RPPR=385.189;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=176;SRP=385.189;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:44:33,11:33:1316:11:446:-27.2503,0,-105.459 0/0:37:35,2:35:1359:2:81:0,-3.45238,-114.885 0/0:21:21,0:21:798:0:0:0,-6.32163,-72.1311 0/0:53:53,0:53:2112:0:0:0,-15.9546,-190.265 0/0:26:26,0:26:951:0:0:0,-7.82678,-85.8659 0/0:8:8,0:8:289:0:0:0,-2.40824,-26.3484 dDocent_Contig_9924 89 . T G 192.726 . AB=0.144928;ABP=154.132;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=321;DPB=321;DPRA=1.5082;EPP=46.4397;EPPR=656.623;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.9;PAIREDR=0.810631;PAO=0;PQA=0;PQR=0;PRO=0;QA=704;QR=10549;RO=301;RPL=9;RPP=3.44459;RPPR=4.2295;RPR=11;RUN=1;SAF=9;SAP=3.44459;SAR=11;SRF=144;SRP=4.2295;SRR=157;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:42:42,0:42:1469:0:0:0,-12.6433,-132.507 0/1:60:52,8:52:1812:8:279:-7.3872,0,-145.302 0/0:31:31,0:31:1089:0:0:0,-9.33193,-98.3211 0/1:78:66,12:66:2329:12:425:-15.1073,0,-186.394 0/0:45:45,0:45:1560:0:0:0,-13.5463,-140.691 0/0:65:65,0:65:2290:0:0:0,-19.5669,-206.364 dDocent_Contig_9925 70 . C A 1058.2 . AB=0.263959;ABP=98.3457;AC=3;AF=0.25;AN=12;AO=58;CIGAR=1X;DP=378;DPB=378;DPRA=0;EPP=128.956;EPPR=695.71;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.62069;PAIREDR=0.501567;PAO=0;PQA=0;PQR=0;PRO=0;QA=2086;QR=12041;RO=319;RPL=34;RPP=6.75422;RPPR=64.4446;RPR=24;RUN=1;SAF=34;SAP=6.75422;SAR=24;SRF=207;SRP=64.4446;SRR=112;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:63:39,24:39:1478:24:893:-61.7167,0,-114.318 0/0:71:69,2:69:2589:2:72:0,-14.5365,-226.347 0/1:69:54,15:54:2032:15:538:-27.9768,0,-162.342 0/1:65:52,13:52:1995:13:451:-21.3487,0,-160.204 0/0:62:60,2:60:2270:2:63:0,-12.6802,-198.528 0/0:48:45,2:45:1677:2:69:0,-7.7661,-144.71 dDocent_Contig_9926 11 . G C 951.905 . AB=0.177215;ABP=288.985;AC=3;AF=0.25;AN=12;AO=56;CIGAR=1X;DP=570;DPB=570;DPRA=1.24409;EPP=124.613;EPPR=1119.15;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2162;QR=20246;RO=514;RPL=0;RPP=124.613;RPPR=1119.15;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=514;SRP=1119.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:81:81,0:81:3202:0:0:0,-24.3834,-288.263 0/1:163:131,32:131:5186:32:1252:-63.889,0,-417.565 0/1:57:47,10:47:1862:10:381:-17.4738,0,-150.633 0/1:96:82,14:82:3199:14:529:-19.0496,0,-259.095 0/0:86:86,0:86:3337:0:0:0,-25.8886,-300.394 0/0:87:87,0:87:3460:0:0:0,-26.1896,-311.45 dDocent_Contig_9927 37 . G T 317.059 . AB=0.182609;ABP=103.634;AC=4;AF=0.333333;AN=12;AO=21;CIGAR=1X;DP=158;DPB=158;DPRA=1.33721;EPP=48.6112;EPPR=300.502;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.890511;PAO=0;PQA=0;PQR=0;PRO=0;QA=801;QR=5407;RO=137;RPL=0;RPP=48.6112;RPPR=300.502;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=137;SRP=300.502;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:18:13,5:13:512:5:183:-11.4038,0,-41.0053 0/1:36:31,5:31:1213:5:186:-6.26171,0,-98.601 0/1:20:15,5:15:608:5:193:-11.7193,0,-49.0379 0/1:41:35,6:35:1349:6:239:-9.54294,0,-109.31 0/0:19:19,0:19:754:0:0:0,-5.71957,-68.1835 0/0:24:24,0:24:971:0:0:0,-7.22472,-87.6886 dDocent_Contig_9928 14 . A G 1757.57 . AB=0.316742;ABP=67.4765;AC=6;AF=0.5;AN=12;AO=70;CIGAR=1X;DP=221;DPB=221;DPRA=0;EPP=155.013;EPPR=330.903;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.485714;PAIREDR=0.430464;PAO=0;PQA=0;PQR=0;PRO=0;QA=2793;QR=6007;RO=151;RPL=0;RPP=155.013;RPPR=330.903;RPR=70;RUN=1;SAF=70;SAP=155.013;SAR=0;SRF=151;SRP=330.903;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:29:23,6:23:917:6:245:-13.6996,0,-74.1049 0/1:65:37,28:37:1455:28:1123:-81.7877,0,-111.63 0/1:17:15,2:15:602:2:81:-2.56822,0,-49.401 0/1:49:29,20:29:1153:20:776:-55.4068,0,-89.2987 0/1:21:18,3:18:709:3:119:-4.77287,0,-57.8098 0/1:40:29,11:29:1171:11:449:-28.7247,0,-93.6249 dDocent_Contig_9929 190 . T C 92.7875 . AB=0.208333;ABP=20.744;AC=1;AF=0.1;AN=10;AO=5;CIGAR=1X;DP=79;DPB=79;DPRA=1.74545;EPP=13.8677;EPPR=163.699;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=197;QR=2882;RO=74;RPL=5;RPP=13.8677;RPPR=163.699;RPR=0;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=163.699;SRR=74;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:622:0:0:0,-5.11751,-56.2937 0/0:21:21,0:21:821:0:0:0,-6.32163,-74.1921 0/0:7:7,0:7:274:0:0:0,-2.10721,-25.0259 0/1:24:19,5:19:770:5:197:-10.8808,0,-62.3951 0/0:10:10,0:10:395:0:0:0,-3.0103,-35.9064 ./.:.:.:.:.:.:.:. dDocent_Contig_9930 13 . C A 72.3995 . AB=0.2;ABP=18.6449;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=263;DPB=263;DPRA=0.411523;EPP=11.6962;EPPR=565.422;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=160;QR=10301;RO=259;RPL=0;RPP=11.6962;RPPR=565.422;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=259;SRP=565.422;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:34,0:34:1353:0:0:0,-10.235,-122.026 0/0:64:64,0:64:2486:0:0:0,-19.2659,-223.891 0/0:44:44,0:44:1744:0:0:0,-13.2453,-157.175 0/0:68:68,0:68:2745:0:0:0,-20.47,-247.151 0/1:20:16,4:16:641:4:160:-8.76283,0,-52.0036 0/0:33:33,0:33:1332:0:0:0,-9.93399,-120.136 dDocent_Contig_9931 11 . C A 536.662 . AB=0.278481;ABP=36.6819;AC=1;AF=0.0833333;AN=12;AO=23;CIGAR=1X;DP=382;DPB=382;DPRA=1.76355;EPP=52.9542;EPPR=782.569;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=915;QR=14261;RO=359;RPL=0;RPP=52.9542;RPPR=782.569;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=359;SRP=782.569;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:64:64,0:64:2503:0:0:0,-19.2659,-225.407 0/0:58:58,0:58:2290:0:0:0,-17.4597,-206.268 0/0:44:44,0:44:1756:0:0:0,-13.2453,-158.261 0/1:79:57,22:57:2285:22:874:-55.1891,0,-182.03 0/0:100:99,1:99:3990:1:41:0,-26.0084,-354.979 0/0:37:37,0:37:1437:0:0:0,-11.1381,-129.577 dDocent_Contig_9932 13 . C A 55.808 . AB=0.112676;ABP=95.5273;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=161;DPB=161;DPRA=1.57778;EPP=20.3821;EPPR=335.246;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.366013;PAO=0;PQA=0;PQR=0;PRO=0;QA=320;QR=6163;RO=153;RPL=0;RPP=20.3821;RPPR=335.246;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=153;SRP=335.246;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:653:0:0:0,-4.81648,-59.1022 0/0:39:39,0:39:1561:0:0:0,-11.7402,-140.722 0/0:12:12,0:12:488:0:0:0,-3.61236,-44.2711 0/0:23:23,0:23:923:0:0:0,-6.92369,-83.3747 0/1:39:34,5:34:1380:5:205:-7.09484,0,-112.711 0/1:32:29,3:29:1158:3:115:-1.09103,0,-94.8679 dDocent_Contig_9933 33 . T G 175.129 . AB=0.2;ABP=38.1882;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=534;DPB=534;DPRA=0.480255;EPP=46.4397;EPPR=1112.63;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=799;QR=20072;RO=511;RPL=0;RPP=46.4397;RPPR=1112.63;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=511;SRP=1112.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:55:53,2:53:2109:2:81:0,-8.87092,-182.314 0/0:44:41,2:41:1579:2:82:0,-5.57407,-134.567 0/0:82:76,6:76:2968:6:238:0,-2.89267,-245.411 0/1:45:36,9:36:1360:9:358:-19.0358,0,-109.102 0/0:157:156,0:156:6185:0:0:0,-46.9607,-556.124 0/0:151:149,1:149:5871:1:40:0,-41.5633,-524.201 dDocent_Contig_9935 15 . G T 483.959 . AB=0.157609;ABP=190.371;AC=1;AF=0.0833333;AN=12;AO=61;CIGAR=1X;DP=1315;DPB=1315;DPRA=1.07053;EPP=135.47;EPPR=2590.41;GTI=0;LEN=1;MEANALT=1.8;MQM=60;MQMR=56.2188;NS=6;NUMALT=1;ODDS=0;PAIRED=0.852459;PAIREDR=0.547868;PAO=0;PQA=0;PQR=0;PRO=0;QA=2407;QR=49589;RO=1243;RPL=0;RPP=135.47;RPPR=2702.15;RPR=61;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=1230;SRP=2590.41;SRR=13;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:178:174,1:174:6947:1:40:0,-49.0789,-600.329 0/0:241:238,1:238:9458:1:41:0,-68.2494,-819.827 0/0:184:172,12:172:6854:12:468:0,-12.9255,-558.671 0/0:207:206,0:206:8205:0:0:0,-62.0122,-720.464 0/0:321:298,18:298:11938:18:691:0,-32.973,-989.326 0/1:184:155,29:155:6187:29:1167:-49.9187,0,-485.646 dDocent_Contig_9936 10 . G T 405.307 . AB=0.15894;ABP=155.574;AC=1;AF=0.0833333;AN=12;AO=24;CIGAR=1X;DP=1328;DPB=1328;DPRA=0.641461;EPP=55.1256;EPPR=2834.61;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=969;QR=52025;RO=1304;RPL=0;RPP=55.1256;RPPR=2834.61;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=1304;SRP=2834.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:83:83,0:83:3310:0:0:0,-24.9855,-297.951 0/0:183:183,0:183:7326:0:0:0,-55.0885,-658.976 0/1:151:127,24:127:5082:24:969:-42.0536,0,-411.791 0/0:130:130,0:130:5158:0:0:0,-39.1339,-464.104 0/0:393:393,0:393:15697:0:0:0,-118.305,-1411.51 0/0:388:388,0:388:15452:0:0:0,-116.8,-1389.49 dDocent_Contig_9938 137 . T A 34.7236 . AB=0.222222;ABP=9.04217;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=1X;DP=77;DPB=77;DPRA=0.661765;EPP=7.35324;EPPR=163.699;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=78;QR=2949;RO=74;RPL=0;RPP=7.35324;RPPR=163.699;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=163.699;SRR=74;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:9:7,2:7:286:2:78:-4.69403,0,-23.4055 0/0:6:6,0:6:240:0:0:0,-1.80618,-21.9745 0/0:38:38,0:38:1505:0:0:0,-11.4391,-135.691 0/0:6:6,0:6:242:0:0:0,-1.80618,-22.1575 0/0:6:6,0:6:230:0:0:0,-1.80618,-21.061 0/0:12:11,0:11:446:0:0:0,-3.31133,-40.0865 dDocent_Contig_9939 107 . N A 93.5587 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=94;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:25:-2.49986,-0.30103,0 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 dDocent_Contig_9940 7 . A G 4132.33 . AB=0.411765;ABP=35.1992;AC=5;AF=0.416667;AN=12;AO=196;CIGAR=1X;DP=537;DPB=537;DPRA=1.56066;EPP=428.619;EPPR=732.625;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.77551;PAIREDR=0.854167;PAO=0;PQA=0;PQR=0;PRO=0;QA=6262;QR=12822;RO=336;RPL=0;RPP=428.619;RPPR=732.625;RPR=196;RUN=1;SAF=196;SAP=428.619;SAR=0;SRF=336;SRP=732.625;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:76:36,40:36:1382:40:1330:-97.0896,0,-101.785 0/1:102:51,51:51:1945:51:1621:-115.421,0,-144.588 0/1:102:56,46:56:2158:46:1426:-97.8781,0,-163.74 0/1:89:38,48:38:1451:48:1506:-109.781,0,-104.85 0/0:61:60,0:60:2275:0:0:0,-18.0618,-204.59 0/1:107:95,11:95:3611:11:379:-2.24697,0,-292.933 dDocent_Contig_9942 24 . T G 1382.03 . AB=0.199438;ABP=282.349;AC=5;AF=0.416667;AN=12;AO=76;CIGAR=1X;DP=435;DPB=435;DPRA=0;EPP=168.042;EPPR=782.569;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.618421;PAIREDR=0.5961;PAO=0;PQA=0;PQR=0;PRO=0;QA=3006;QR=13634;RO=359;RPL=0;RPP=168.042;RPPR=782.569;RPR=76;RUN=1;SAF=76;SAP=168.042;SAR=0;SRF=359;SRP=782.569;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:75:67,8:67:2591:8:317:-6.31754,0,-210.781 0/0:79:74,5:74:2760:5:196:0,-5.76832,-230.554 0/1:33:26,7:26:943:7:286:-16.1808,0,-75.2262 0/1:82:67,15:67:2553:15:604:-30.0135,0,-205.27 0/1:80:58,22:58:2201:22:879:-55.3347,0,-174.223 0/1:86:67,19:67:2586:19:724:-39.5786,0,-207.025 dDocent_Contig_9943 10 . G C 40.3779 . AB=0.157895;ABP=22.325;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=125;DPB=125;DPRA=0.896226;EPP=9.52472;EPPR=267.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.778689;PAO=0;PQA=0;PQR=0;PRO=0;QA=121;QR=4808;RO=122;RPL=0;RPP=9.52472;RPPR=267.93;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=122;SRP=267.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:653:0:0:0,-5.11751,-59.0923 0/0:21:21,0:21:845:0:0:0,-6.32163,-76.3625 0/0:9:9,0:9:342:0:0:0,-2.70927,-31.1289 0/0:40:40,0:40:1603:0:0:0,-12.0412,-144.505 0/1:19:16,3:16:624:3:121:-5.56063,0,-50.7729 0/0:19:19,0:19:741:0:0:0,-5.71957,-67.0098 dDocent_Contig_9945 72 . A T 51.2473 . AB=0.2;ABP=18.6449;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=157;DPB=157;DPRA=0.729927;EPP=11.6962;EPPR=335.246;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.980392;PAO=0;PQA=0;PQR=0;PRO=0;QA=137;QR=4758;RO=153;RPL=4;RPP=11.6962;RPPR=335.246;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=153;SRP=335.246;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:32,0:32:996:0:0:0,-9.63296,-89.9323 0/0:39:39,0:39:1222:0:0:0,-11.7402,-110.268 0/0:11:11,0:11:338:0:0:0,-3.31133,-30.7214 0/0:29:29,0:29:929:0:0:0,-8.72987,-83.9086 0/1:20:16,4:16:469:4:137:-6.64761,0,-36.4745 0/0:26:26,0:26:804:0:0:0,-7.82678,-72.6541 dDocent_Contig_9946 41 . G A 387.096 . AB=0.119874;ABP=400.869;AC=2;AF=0.166667;AN=12;AO=43;CIGAR=1X;DP=837;DPB=837;DPRA=1.61364;EPP=96.3836;EPPR=1727.16;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1693;QR=31504;RO=794;RPL=0;RPP=96.3836;RPPR=1727.16;RPR=43;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=794;SRP=1727.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:293:267,26:267:10621:26:1034:-5.15466,0,-867.001 0/0:244:243,1:243:9685:1:14:0,-72.0513,-869.669 0/0:78:74,4:74:2939:4:160:0,-8.69654,-249.825 0/0:167:167,0:167:6629:0:0:0,-50.272,-596.335 0/1:24:12,12:12:474:12:485:-36.7767,0,-35.7857 0/0:31:31,0:31:1156:0:0:0,-9.33193,-104.317 dDocent_Contig_9947 21 . G T 74.5098 . AB=0.133333;ABP=55.5599;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=168;DPB=168;DPRA=2.36364;EPP=20.3821;EPPR=350.446;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.25;PAIREDR=0.83125;PAO=0;PQA=0;PQR=0;PRO=0;QA=325;QR=6415;RO=160;RPL=0;RPP=20.3821;RPPR=350.446;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=160;SRP=350.446;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:1002:0:0:0,-7.52575,-90.4735 0/0:20:20,0:20:809:0:0:0,-6.0206,-73.1254 0/0:3:3,0:3:123:0:0:0,-0.90309,-11.4648 0/0:29:29,0:29:1154:0:0:0,-8.72987,-104.137 0/0:46:44,2:44:1760:2:79:0,-6.34975,-151.119 0/1:45:39,6:39:1567:6:246:-8.97377,0,-127.714 dDocent_Contig_9948 49 . C A 49.3471 . AB=0.125;ABP=51.8684;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=299;DPB=299;DPRA=0.772201;EPP=13.8677;EPPR=173.656;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.520408;PAO=0;PQA=0;PQR=0;PRO=0;QA=198;QR=11390;RO=294;RPL=0;RPP=13.8677;RPPR=173.656;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=294;SRP=641.423;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:40:35,5:35:1315:5:198:-6.15655,0,-106.563 0/0:63:63,0:63:2446:0:0:0,-18.9649,-220.294 0/0:42:42,0:42:1663:0:0:0,-12.6433,-149.905 0/0:77:77,0:77:3009:0:0:0,-23.1793,-270.915 0/0:48:48,0:48:1843:0:0:0,-14.4494,-166.07 0/0:29:29,0:29:1114:0:0:0,-8.72987,-100.538 dDocent_Contig_9950 34 . C T 192.268 . AB=0.140845;ABP=82.5596;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1M1D8M1X2M;DP=145;DPB=144.538;DPRA=1.65116;EPP=24.725;EPPR=228.843;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=6;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=380;QR=4081;RO=104;RPL=0;RPP=24.725;RPPR=228.843;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=104;SRP=228.843;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:15:13,0,2,0,0,0,0:13:509:0,2,0,0,0,0:0,65,0,0,0,0:-1.65758,-5.57097,-47.4793,0,-42.242,-41.64,-5.57097,-47.4793,-42.242,-47.4793,-5.57097,-47.4793,-42.242,-47.4793,-47.4793,-5.57097,-47.4793,-42.242,-47.4793,-47.4793,-47.4793,-5.57097,-47.4793,-42.242,-47.4793,-47.4793,-47.4793,-47.4793 0|1:28:21,3,0,0,2,2,0:21:829:3,0,0,2,2,0:118,0,0,75,80,0:-3.38643,0,-67.3169,-9.70806,-68.22,-77.9256,-9.70806,-68.22,-77.9256,-77.9256,-3.57196,-62.0796,-71.7849,-71.7849,-71.1829,-3.11391,-61.6293,-71.3349,-71.3349,-65.1943,-70.7328,-9.70806,-68.22,-77.9256,-77.9256,-71.7849,-71.3349,-77.9256 0|0:43:18,7,0,8,4,4,0:18:690:7,0,8,4,4,0:262,0,288,162,163,0:-18.0566,-2.02527,-56.5415,-23.4752,-58.6487,-80.1002,0,-35.1699,-56.6196,-54.2114,-10.1126,-45.2879,-66.7396,-43.2591,-65.5355,-10.0232,-45.1986,-66.6504,-43.1698,-53.2893,-65.4463,-23.4752,-58.6487,-80.1002,-56.6196,-66.7396,-66.6504,-80.1002 0|0:23:20,0,0,1,1,0,1:20:783:0,0,1,1,0,1:0,0,35,35,0,41:0,-6.0206,-70.4226,-6.0206,-70.4226,-70.4226,-3.1828,-67.5766,-67.5766,-67.2756,-3.1828,-67.5766,-67.5766,-64.7308,-67.2756,-6.0206,-70.4226,-70.4226,-67.5766,-67.5766,-70.4226,-2.61665,-67.0375,-67.0375,-64.1916,-64.1916,-67.0375,-66.7365 0|0:20:18,0,0,0,0,0,0:18:709:0,0,0,0,0,0:0,0,0,0,0,0:0,-5.41854,-63.7462,-5.41854,-63.7462,-63.7462,-5.41854,-63.7462,-63.7462,-63.7462,-5.41854,-63.7462,-63.7462,-63.7462,-63.7462,-5.41854,-63.7462,-63.7462,-63.7462,-63.7462,-63.7462,-5.41854,-63.7462,-63.7462,-63.7462,-63.7462,-63.7462,-63.7462 0|0:16:14,0,0,0,0,0,2:14:561:0,0,0,0,0,2:0,0,0,0,0,82:-2.9632,-7.17762,-53.3891,-7.17762,-53.3891,-53.3891,-7.17762,-53.3891,-53.3891,-53.3891,-7.17762,-53.3891,-53.3891,-53.3891,-53.3891,-7.17762,-53.3891,-53.3891,-53.3891,-53.3891,-53.3891,0,-46.6198,-46.6198,-46.6198,-46.6198,-46.6198,-46.0178 dDocent_Contig_9951 23 . C T 685.918 . AB=0.0540541;ABP=66.922;AC=0;AF=0;AN=12;AO=2;CIGAR=8M1X8M3D5M;DP=132;DPB=115.84;DPRA=1.7619;EPP=7.35324;EPPR=196.271;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.865169;PAO=0;PQA=0;PQR=0;PRO=0;QA=74;QR=3488;RO=89;RPL=0;RPP=7.35324;RPPR=196.271;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=89;SRP=196.271;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:20:10,0,7,0,2:10:398:0,7,0,2:0,264,0,81:-18.6012,-21.6115,-54.3899,0,-32.7658,-30.6586,-21.6115,-54.3899,-32.7658,-54.3899,-14.9276,-47.7093,-26.0857,-47.7093,-47.1073 0|0:19:13,0,6,0,0:13:504:0,6,0,0:0,222,0,0:-14.6174,-18.5308,-59.9498,0,-41.7944,-39.9882,-18.5308,-59.9498,-41.7944,-59.9498,-18.5308,-59.9498,-41.7944,-59.9498,-59.9498 0|0:20:13,0,0,0,6:13:506:0,0,0,6:0,0,0,243:-16.3935,-20.3069,-61.9099,-20.3069,-61.9099,-61.9099,-20.3069,-61.9099,-61.9099,-61.9099,0,-41.8616,-41.8616,-41.8616,-40.0554 0|0:15:11,0,1,0,2:11:430:0,1,0,2:0,40,0,80:-3.30602,-6.61735,-41.9838,-3.31314,-38.6877,-38.3866,-6.61735,-41.9838,-38.6877,-41.9838,0,-35.3917,-32.0952,-35.3917,-34.7896 0|0:37:22,10,0,2,3:22:869:10,0,2,3:384,0,74,123:-24.8919,0,-68.5006,-31.5146,-71.5109,-103.029,-25.4633,-65.459,-96.9765,-96.3745,-21.3567,-61.3568,-92.8754,-86.8227,-91.9723 0|0:21:20,0,0,0,0:20:781:0,0,0,0:0,0,0,0:0,-6.0206,-70.2018,-6.0206,-70.2018,-70.2018,-6.0206,-70.2018,-70.2018,-70.2018,-6.0206,-70.2018,-70.2018,-70.2018,-70.2018 dDocent_Contig_9952 53 . T G 2162.95 . AB=0.7;ABP=37.7539;AC=5;AF=0.416667;AN=12;AO=71;CIGAR=1X;DP=129;DPB=129;DPRA=1.80357;EPP=157.185;EPPR=126.784;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2782;QR=2220;RO=57;RPL=71;RPP=157.185;RPPR=126.784;RPR=0;RUN=1;SAF=71;SAP=157.185;SAR=0;SRF=57;SRP=126.784;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:16,7:16:634:7:286:-18.8166,0,-50.1001 0/0:17:17,0:17:645:0:0:0,-5.11751,-58.3637 0/1:52:7,45:7:280:45:1776:-144.408,0,-9.91564 0/1:24:6,18:6:239:18:679:-54.1979,0,-14.6592 0/0:11:11,0:11:422:0:0:0,-3.31133,-38.325 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 dDocent_Contig_9953 7 . A G 3014.04 . AB=0.510714;ABP=3.28949;AC=5;AF=0.416667;AN=12;AO=151;CIGAR=1X;DP=369;DPB=369;DPRA=0;EPP=330.903;EPPR=474.22;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.97351;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4570;QR=8241;RO=217;RPL=0;RPP=330.903;RPPR=474.22;RPR=151;RUN=1;SAF=151;SAP=330.903;SAR=0;SRF=217;SRP=474.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:87:44,42:44:1657:42:1311:-92.0372,0,-123.179 0/1:79:30,49:30:1135:49:1495:-111.012,0,-78.6656 0/0:89:81,8:81:3058:8:205:0,-8.09208,-256.682 0/1:69:44,25:44:1698:25:784:-50.0646,0,-132.309 0/1:8:1,7:1:37:7:245:-19.98,0,-1.28959 0/1:37:17,20:17:656:20:530:-36.8075,0,-48.2389 dDocent_Contig_9954 12 . C T 2091.33 . AB=0.17038;ABP=723.065;AC=2;AF=0.166667;AN=12;AO=136;CIGAR=1X;DP=1887;DPB=1887;DPRA=0.968421;EPP=298.331;EPPR=3803.09;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5140;QR=69351;RO=1750;RPL=0;RPP=298.331;RPPR=3803.09;RPR=136;RUN=1;SAF=136;SAP=298.331;SAR=0;SRF=1750;SRP=3803.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:323:322,0:322:12723:0:0:0,-96.9317,-1144.1 0/0:380:379,1:379:14939:1:38:0,-110.594,-1339.61 0/0:233:229,4:229:9113:4:154:0,-55.9067,-805.386 0/0:188:187,1:187:7430:1:41:0,-52.4991,-664.224 0/1:348:294,54:294:11682:54:2049:-79.886,0,-945.835 0/1:415:339,76:339:13464:76:2858:-132.468,0,-1085.87 dDocent_Contig_9955 108 . G C 145.075 . AB=0.125;ABP=227.758;AC=1;AF=0.0833333;AN=12;AO=28;CIGAR=1X;DP=730;DPB=730;DPRA=3.45122;EPP=63.8115;EPPR=1520.87;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.964286;PAIREDR=0.964235;PAO=0;PQA=0;PQR=0;PRO=0;QA=942;QR=23027;RO=699;RPL=0;RPP=63.8115;RPPR=1520.87;RPR=28;RUN=1;SAF=0;SAP=63.8115;SAR=28;SRF=0;SRP=1520.87;SRR=699;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:54,0:54:1747:0:0:0,-16.2556,-157.506 0/0:83:82,1:82:2728:1:18:0,-23.1855,-243.971 0/0:75:75,0:75:2438:0:0:0,-22.5772,-219.676 0/0:35:35,0:35:1121:0:0:0,-10.536,-101.181 0/0:299:294,4:294:9639:4:139:0,-76.9797,-854.759 0/1:184:159,23:159:5354:23:785:-16.0304,0,-427.117 dDocent_Contig_9956 107 . N A 153.536 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0.4;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=160;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:4:0,4:0:0:4:126:-11.6523,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_9957 18 . T C 2132.67 . AB=0.268657;ABP=158.741;AC=2;AF=0.166667;AN=12;AO=99;CIGAR=1X;DP=763;DPB=763;DPRA=1.41456;EPP=217.986;EPPR=1442.7;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998492;PAO=0;PQA=0;PQR=0;PRO=0;QA=3885;QR=26490;RO=663;RPL=0;RPP=217.986;RPPR=1442.7;RPR=99;RUN=1;SAF=99;SAP=217.986;SAR=0;SRF=663;SRP=1442.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:142:142,0:142:5648:0:0:0,-42.7463,-508.127 0/1:224:182,42:182:7267:42:1648:-81.1214,0,-586.23 0/0:112:102,9:102:4106:9:364:0,-0.681534,-336.375 0/1:111:63,48:63:2516:48:1873:-135.368,0,-193.159 0/0:75:75,0:75:3000:0:0:0,-22.5772,-270.09 0/0:99:99,0:99:3953:0:0:0,-29.802,-355.756 dDocent_Contig_9958 59 . T C 450.641 . AB=0.27381;ABP=40.3389;AC=2;AF=0.166667;AN=12;AO=29;CIGAR=1X;DP=235;DPB=235;DPRA=1.45833;EPP=65.983;EPPR=450.334;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.482759;PAIREDR=0.674757;PAO=0;PQA=0;PQR=0;PRO=0;QA=1029;QR=7205;RO=206;RPL=0;RPP=65.983;RPPR=450.334;RPR=29;RUN=1;SAF=0;SAP=65.983;SAR=29;SRF=0;SRP=450.334;SRR=206;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:51:39,12:39:1339:12:419:-22.6907,0,-105.453 0/0:42:39,3:39:1358:3:108:0,-2.56809,-112.446 0/0:19:19,0:19:666:0:0:0,-5.71957,-60.2658 0/1:33:22,11:22:776:11:391:-25.5952,0,-60.2293 0/0:41:41,0:41:1443:0:0:0,-12.3422,-130.163 0/0:49:46,3:46:1623:3:111:0,-4.39655,-136.004 dDocent_Contig_9959 28 . G T 1142.38 . AB=0.509434;ABP=3.09224;AC=2;AF=0.166667;AN=12;AO=73;CIGAR=1X;DP=957;DPB=957;DPRA=0.65;EPP=161.528;EPPR=1920.42;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2230;QR=34743;RO=883;RPL=0;RPP=161.528;RPPR=1920.42;RPR=73;RUN=1;SAF=73;SAP=161.528;SAR=0;SRF=883;SRP=1920.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:224:224,0:224:8816:0:0:0,-67.4307,-792.936 0/0:268:268,0:268:10656:0:0:0,-80.676,-958.35 0/0:88:88,0:88:3468:0:0:0,-26.4906,-312.155 0/0:271:252,19:252:9827:19:579:0,-29.1772,-831.45 0/1:58:20,37:20:768:37:1140:-85.6338,0,-52.1735 0/1:48:31,17:31:1208:17:511:-31.8261,0,-94.5397 dDocent_Contig_9960 19 . A T 7350.26 . AB=0.153946;ABP=3219.21;AC=6;AF=0.5;AN=12;AO=476;CIGAR=1X;DP=3092;DPB=3092;DPRA=0;EPP=1036.63;EPPR=5670.55;GTI=0;LEN=1;MEANALT=2;MQM=58.8782;MQMR=55.91;NS=6;NUMALT=1;ODDS=0;PAIRED=0.997899;PAIREDR=0.978161;PAO=0;PQA=0;PQR=0;PRO=0;QA=18686;QR=102690;RO=2610;RPL=0;RPP=1036.63;RPPR=5670.55;RPR=476;RUN=1;SAF=476;SAP=1036.63;SAR=0;SRF=2610;SRP=5670.55;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:472:398,73:398:15654:73:2875:-116.124,0,-1237.19 0/1:540:467,72:467:18361:72:2820:-87.5422,0,-1454.74 0/1:463:389,74:389:15426:74:2854:-116.95,0,-1214.57 0/1:493:406,85:406:15864:85:3360:-153.922,0,-1260.31 0/1:592:496,96:496:19540:96:3798:-163.541,0,-1564.87 0/1:532:454,76:454:17845:76:2979:-108.167,0,-1434.39 dDocent_Contig_9961 25 . T C 41.3936 . AB=0.136364;ABP=28.2783;AC=0;AF=0;AN=12;AO=3;CIGAR=2X1M1X;DP=116;DPB=116;DPRA=1.17021;EPP=9.52472;EPPR=239.701;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=111;QR=4254;RO=109;RPL=0;RPP=9.52472;RPPR=239.701;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=109;SRP=239.701;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:22:16,3,3:16:633:3,3:111,123:-5.35562,-1.11201,-52.2891,0,-43.0377,-51.2105 0|0:20:20,0,0:20:788:0,0:0,0:0,-6.0206,-71.2407,-6.0206,-71.2407,-71.2407 0|0:18:18,0,0:18:709:0,0:0,0:0,-5.41854,-64.1393,-5.41854,-64.1393,-64.1393 0|0:14:14,0,0:14:547:0,0:0,0:0,-4.21442,-49.5701,-4.21442,-49.5701,-49.5701 0|0:20:20,0,0:20:766:0,0:0,0:0,-6.0206,-69.2573,-6.0206,-69.2573,-69.2573 0|0:22:21,0,0:21:811:0,0:0,0:0,-6.32163,-73.1958,-6.32163,-73.1958,-73.1958 dDocent_Contig_9962 34 . A C 355.666 . AB=0.6;ABP=4.74748;AC=1;AF=0.1;AN=10;AO=12;CIGAR=1X;DP=133;DPB=133;DPRA=0.707965;EPP=29.068;EPPR=265.758;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=476;QR=4787;RO=121;RPL=0;RPP=29.068;RPPR=265.758;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=121;SRP=265.758;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:39,0:39:1540:0:0:0,-11.7402,-138.842 0/0:36:36,0:36:1418:0:0:0,-10.8371,-127.874 0/0:32:32,0:32:1267:0:0:0,-9.63296,-114.296 0/0:6:6,0:6:235:0:0:0,-1.80618,-21.5173 ./.:.:.:.:.:.:.:. 0/1:20:8,12:8:327:12:476:-37.1686,0,-23.7795 dDocent_Contig_9963 41 . A T 49.5851 . AB=0.122449;ABP=63.6786;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=127;DPB=127;DPRA=1.25641;EPP=16.0391;EPPR=265.758;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.818182;PAO=0;PQA=0;PQR=0;PRO=0;QA=246;QR=4829;RO=121;RPL=0;RPP=16.0391;RPPR=265.758;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=121;SRP=265.758;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:877:0:0:0,-6.62266,-79.2381 0/1:25:22,3:22:879:3:123:-3.93904,0,-71.8929 0/1:24:21,3:21:837:3:123:-4.24007,0,-68.4155 0/0:23:23,0:23:925:0:0:0,-6.92369,-83.5539 0/0:12:12,0:12:476:0:0:0,-3.61236,-43.1885 0/0:21:21,0:21:835:0:0:0,-6.32163,-75.4601 dDocent_Contig_9964 107 . N A 187.761 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=198;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:100:-9.33053,-0.90309,0 1/1:3:0,3:0:0:3:98:-9.14405,-0.90309,0 dDocent_Contig_9965 19 . T C 211.653 . AB=0.136;ABP=146.866;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1X;DP=291;DPB=291;DPRA=1.31875;EPP=52.9542;EPPR=584.965;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.26087;PAIREDR=0.391791;PAO=0;PQA=0;PQR=0;PRO=0;QA=921;QR=10753;RO=268;RPL=0;RPP=52.9542;RPPR=584.965;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=268;SRP=584.965;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:47:42,5:42:1683:5:196:-3.86443,0,-137.541 0/1:78:66,12:66:2637:12:485:-20.5211,0,-213.966 0/0:26:24,2:24:978:2:82:0,-0.0471021,-80.5358 0/0:60:56,4:56:2223:4:158:0,-3.46244,-185.641 0/0:34:34,0:34:1362:0:0:0,-10.235,-122.836 0/0:46:46,0:46:1870:0:0:0,-13.8474,-168.494 dDocent_Contig_9966 82 . G A 4641.55 . AB=0.630662;ABP=45.5696;AC=4;AF=0.333333;AN=12;AO=181;CIGAR=1X;DP=453;DPB=453;DPRA=0.864458;EPP=396.047;EPPR=591.479;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6182;QR=9079;RO=271;RPL=181;RPP=396.047;RPPR=591.479;RPR=0;RUN=1;SAF=181;SAP=396.047;SAR=0;SRF=271;SRP=591.479;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:138:49,89:49:1689:89:2960:-225.098,0,-110.758 0/1:35:13,22:13:434:22:759:-58.094,0,-28.8455 0/1:48:29,19:29:976:19:662:-45.4546,0,-73.6974 0/1:66:14,51:14:472:51:1801:-142.731,0,-23.1488 0/0:92:92,0:92:3008:0:0:0,-27.6948,-270.963 0/0:74:74,0:74:2500:0:0:0,-22.2762,-225.26 dDocent_Contig_9968 25 . G A 183.995 . AB=0.157895;ABP=22.325;AC=2;AF=0.166667;AN=12;AO=3;CIGAR=2X;DP=82;DPB=82;DPRA=0.475;EPP=9.52472;EPPR=152.842;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=119;QR=2517;RO=69;RPL=0;RPP=9.52472;RPPR=152.842;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=69;SRP=152.842;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:12:10,0,2:10:360:0,2:0,77:-3.69678,-6.70708,-36.0568,0,-29.7302,-29.1282 0|0:20:20,0,0:20:715:0,0:0,0:0,-6.0206,-64.6695,-6.0206,-64.6695,-64.6695 0|1:7:5,2,0:5:188:2,0:80,0:-5.48458,0,-15.1771,-6.98973,-15.7792,-22.3762 0|1:12:11,1,0:11:411:1,0:39,0:-0.284205,0,-33.7268,-3.59553,-34.0279,-37.2351 0|0:18:15,0,2:15:543:0,2:0,80:-2.10121,-6.61666,-50.9208,0,-44.3264,-43.7244 0|0:13:8,0,5:8:300:0,5:0,198:-14.2824,-16.6906,-41.2501,0,-24.947,-23.4419 dDocent_Contig_9969 26 . C A 159.596 . AB=0.2;ABP=42.0968;AC=4;AF=0.333333;AN=12;AO=10;CIGAR=1X;DP=71;DPB=71;DPRA=1.19048;EPP=24.725;EPPR=135.47;GTI=0;LEN=1;MEANALT=1;MQM=58.8;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=401;QR=2425;RO=61;RPL=0;RPP=24.725;RPPR=135.47;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=61;SRP=135.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:473:0:0:0,-3.61236,-42.9173 0/1:9:8,1:8:321:1:41:-1.3853,0,-26.547 0/1:20:17,3:17:673:3:122:-5.35189,0,-54.8792 0/1:11:8,3:8:326:3:123:-8.15346,0,-26.3985 0/0:9:9,0:9:363:0:0:0,-2.70927,-33.0338 0/1:10:7,3:7:269:3:115:-7.65883,0,-21.5575 dDocent_Contig_9970 32 . A G 5756.27 . AB=0.57377;ABP=20.3109;AC=6;AF=0.5;AN=12;AO=210;CIGAR=1X;DP=366;DPB=366;DPRA=0;EPP=459.02;EPPR=341.76;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.942857;PAIREDR=0.967949;PAO=0;PQA=0;PQR=0;PRO=0;QA=7725;QR=5843;RO=156;RPL=0;RPP=459.02;RPPR=341.76;RPR=210;RUN=1;SAF=210;SAP=459.02;SAR=0;SRF=156;SRP=341.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:61:6,55:6:224:55:1986:-160.616,0,-2.156 0/1:47:20,27:20:763:27:1014:-77.4216,0,-54.8491 0/1:47:35,12:35:1321:12:449:-26.6031,0,-105.033 0/1:98:60,38:60:2233:38:1411:-97.7704,0,-171.695 0/1:57:25,32:25:922:32:1164:-87.8981,0,-66.136 0/1:56:10,46:10:380:46:1701:-136.492,0,-17.6965 dDocent_Contig_9971 48 . G A 281.328 . AB=0.245283;ABP=32.8783;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=300;DPB=300;DPRA=1.07287;EPP=31.2394;EPPR=626.223;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=503;QR=11265;RO=287;RPL=0;RPP=31.2394;RPPR=626.223;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=287;SRP=626.223;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:37,0:37:1435:0:0:0,-11.1381,-129.4 0/0:51:51,0:51:2018:0:0:0,-15.3525,-181.812 0/1:53:40,13:40:1565:13:503:-29.6557,0,-125.129 0/0:30:30,0:30:1194:0:0:0,-9.0309,-107.741 0/0:92:92,0:92:3595:0:0:0,-27.6948,-323.582 0/0:37:37,0:37:1458:0:0:0,-11.1381,-131.466 dDocent_Contig_9972 49 . A T 2820.19 . AB=0.515957;ABP=3.42611;AC=4;AF=0.333333;AN=12;AO=97;CIGAR=2X;DP=250;DPB=250;DPRA=1.51613;EPP=205.047;EPPR=335.246;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3829;QR=5933;RO=153;RPL=96;RPP=205.047;RPPR=335.246;RPR=1;RUN=1;SAF=97;SAP=213.643;SAR=0;SRF=153;SRP=335.246;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:61:26,35:26:997:35:1376:-105.744,0,-71.6618 0|1:42:19,23:19:751:23:906:-69.2083,0,-55.27 0|0:16:16,0:16:625:0:0:0,-4.81648,-56.5855 0|0:46:46,0:46:1783:0:0:0,-13.8474,-160.696 0|1:30:4,26:4:148:26:1025:-83.5174,0,-4.64835 0|1:55:42,13:42:1629:13:522:-30.7708,0,-130.3 dDocent_Contig_9973 23 . C G 1848.18 . AB=0.406061;ABP=15.6575;AC=4;AF=0.333333;AN=12;AO=67;CIGAR=1X;DP=184;DPB=184;DPRA=4.34211;EPP=148.499;EPPR=257.073;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2671;QR=4579;RO=117;RPL=0;RPP=148.499;RPPR=257.073;RPR=67;RUN=1;SAF=67;SAP=148.499;SAR=0;SRF=117;SRP=257.073;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:40:17,23:17:655:23:920:-71.0644,0,-47.229 0/1:44:34,10:34:1334:10:405:-23.5651,0,-107.081 0/1:40:23,17:23:912:17:669:-48.4954,0,-70.3474 0/1:41:24,17:24:920:17:677:-48.9146,0,-70.7542 0/0:4:4,0:4:153:0:0:0,-1.20412,-14.1379 0/0:15:15,0:15:605:0:0:0,-4.51545,-54.7885 dDocent_Contig_9975 36 . G T 994.882 . AB=0.187726;ABP=237.631;AC=3;AF=0.3;AN=10;AO=53;CIGAR=1X;DP=358;DPB=358;DPRA=7.88636;EPP=118.098;EPPR=663.138;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2119;QR=12059;RO=304;RPL=0;RPP=118.098;RPPR=663.138;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=304;SRP=663.138;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:91:80,11:80:3136:11:435:-12.1079,0,-254.916 0/1:102:69,33:69:2746:33:1327:-88.9868,0,-216.552 0/1:84:75,8:75:3012:8:316:-3.69281,0,-246.084 0/0:70:69,1:69:2757:1:41:0,-16.9775,-244.151 ./.:.:.:.:.:.:.:. 0/0:11:11,0:11:408:0:0:0,-3.31133,-37.0494 dDocent_Contig_9976 8 . A T 70.7762 . AB=0.153846;ABP=43.6001;AC=1;AF=0.0833333;AN=12;AO=22;CIGAR=1X;DP=573;DPB=573;DPRA=5.83158;EPP=50.7827;EPPR=1195.15;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=847;QR=20975;RO=549;RPL=0;RPP=50.7827;RPPR=1195.15;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=549;SRP=1195.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:733:0:0:0,-5.71957,-66.3014 0/1:39:32,6:32:1217:6:223:-8.60049,0,-97.994 0/0:59:57,2:57:2188:2:78:0,-10.3573,-189.741 0/0:86:82,4:82:3139:4:156:0,-11.4713,-268.25 0/0:239:229,9:229:8737:9:351:0,-40.083,-754.137 0/0:131:130,1:130:4961:1:39:0,-35.5384,-442.628 dDocent_Contig_9977 31 . T C 1737.05 . AB=0.491935;ABP=3.08035;AC=6;AF=0.5;AN=12;AO=61;CIGAR=6M1X7M;DP=124;DPB=121.429;DPRA=0;EPP=135.47;EPPR=131.127;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2441;QR=2299;RO=59;RPL=0;RPP=135.47;RPPR=131.127;RPR=61;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=59;SRP=131.127;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:17:10,3,4:10:397:3,4:114,163:-10.4526,-4.12518,-35.8977,0,-23.3505,-31.4919 0|1:25:13,0,12:13:505:0,12:0,480:-36.0232,-39.9366,-81.4271,0,-41.8845,-38.2721 0|1:11:6,0,5:6:231:0,5:0,204:-15.4327,-17.2389,-36.1922,0,-19.3505,-17.8453 0|1:20:14,0,6:14:543:0,6:0,242:-16.1363,-20.3508,-64.9521,0,-44.9996,-43.1934 0|1:20:11,0,8:11:423:0,8:0,326:-23.5811,-26.8924,-61.6048,0,-34.7019,-32.2937 0|1:31:5,0,26:5:200:0,26:0,1026:-83.3004,-84.8056,-101.282,0,-16.875,-9.04819 dDocent_Contig_9978 8 . A G 6089.27 . AB=0.597183;ABP=32.1325;AC=4;AF=0.333333;AN=12;AO=212;CIGAR=1X;DP=405;DPB=405;DPRA=3.55;EPP=463.362;EPPR=422.104;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8023;QR=7365;RO=193;RPL=0;RPP=463.362;RPPR=422.104;RPR=212;RUN=1;SAF=212;SAP=463.362;SAR=0;SRF=193;SRP=422.104;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:83:18,65:18:691:65:2479:-198.329,0,-37.5383 0/1:150:35,115:35:1331:115:4340:-345.511,0,-74.9245 0/1:100:79,21:79:3006:21:779:-40.3267,0,-240.606 0/1:22:11,11:11:427:11:425:-31.9819,0,-32.1624 0/0:17:17,0:17:647:0:0:0,-5.11751,-58.5661 0/0:33:33,0:33:1263:0:0:0,-9.93399,-113.962 dDocent_Contig_9979 23 . T A 16842.6 . AB=0.626467;ABP=133.18;AC=6;AF=0.5;AN=12;AO=587;CIGAR=3M2X;DP=937;DPB=940;DPRA=0;EPP=1277.66;EPPR=454.677;GTI=0;LEN=1;MEANALT=5.66667;MQM=47.9659;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.00511073;PAIREDR=0.701923;PAO=0;PQA=0;PQR=0;PRO=0;QA=22771;QR=8159;RO=208;RPL=0;RPP=1277.66;RPPR=454.677;RPR=587;RUN=1;SAF=587;SAP=1277.66;SAR=0;SRF=208;SRP=454.677;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:152:30,2,100,14:30:1149:2,100,14:79,3871,560:-287.526,-290.482,-384.165,0,-88.2067,-64.1785,-251.475,-339.686,-49.1997,-341.547 1|0:189:29,10,105,41:29:1141:10,105,41:398,4088,1650:-332.278,-312.155,-403.007,-42.0612,-107.071,-104.311,-205.085,-270.098,0,-286.608 0|1:115:24,3,78,6:24:951:3,78,6:114,3055,244:-222.697,-221.531,-298.911,0,-69.9119,-54.819,-210.059,-279.953,-58.4364,-286.537 0|1:138:17,4,101,8:17:656:4,101,8:154,3909,325:-285.458,-279.056,-331.726,0,-42.362,-23.4743,-263.766,-306.121,-27.0644,-315.232 0|1:197:65,0,117,5:65:2565:0,117,5:0,4545,192:-333.534,-353.101,-564.154,0,-211.046,-175.826,-337.478,-548.531,-195.424,-547.026 0|1:146:43,5,86,9:43:1697:5,86,9:197,3303,356:-233.994,-233.019,-371.155,0,-125.747,-113.774,-217.775,-343.499,-110.502,-354.709 dDocent_Contig_9980 84 . T C 381.397 . AB=0.421053;ABP=5.06748;AC=1;AF=0.1;AN=10;AO=16;CIGAR=1X;DP=346;DPB=346;DPRA=0.493506;EPP=37.7539;EPPR=719.596;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=565;QR=11559;RO=330;RPL=16;RPP=37.7539;RPPR=719.596;RPR=0;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=330;SRP=719.596;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:70:70,0:70:2470:0:0:0,-21.0721,-222.555 0/0:54:54,0:54:1891:0:0:0,-16.2556,-170.467 0/1:38:22,16:22:783:16:565:-39.7417,0,-59.3547 ./.:.:.:.:.:.:.:. 0/0:134:134,0:134:4691:0:0:0,-40.338,-422.36 0/0:50:50,0:50:1724:0:0:0,-15.0515,-155.438 dDocent_Contig_9981 18 . G A 15070.2 . AB=0.511111;ABP=4.07191;AC=4;AF=0.333333;AN=12;AO=508;CIGAR=1X;DP=1213;DPB=1213;DPRA=2.15534;EPP=1106.12;EPPR=1533.9;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.984397;PAO=0;PQA=0;PQR=0;PRO=0;QA=20220;QR=27988;RO=705;RPL=0;RPP=1106.12;RPPR=1533.9;RPR=508;RUN=1;SAF=508;SAP=1106.12;SAR=0;SRF=705;SRP=1533.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:115:101,14:101:4039:14:531:-13.4994,0,-328.865 0/1:72:50,22:50:2011:22:879:-57.7441,0,-159.505 0/0:120:118,2:118:4601:2:78:0,-28.7208,-406.624 0/0:103:103,0:103:4088:0:0:0,-31.0061,-367.898 0/1:488:209,279:209:8348:279:11139:-854.835,0,-603.947 0/1:315:124,191:124:4901:191:7593:-588.167,0,-346.149 dDocent_Contig_9982 9 . A G 3559.35 . AB=0.290385;ABP=201.466;AC=5;AF=0.416667;AN=12;AO=156;CIGAR=1X;DP=623;DPB=623;DPRA=0;EPP=341.76;EPPR=1017.09;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.942308;PAIREDR=0.93576;PAO=0;PQA=0;PQR=0;PRO=0;QA=5970;QR=17733;RO=467;RPL=0;RPP=341.76;RPPR=1017.09;RPR=156;RUN=1;SAF=156;SAP=341.76;SAR=0;SRF=467;SRP=1017.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:89:50,39:50:1895:39:1493:-107.853,0,-144.005 0/1:86:75,11:75:2874:11:425:-12.7157,0,-232.947 0/1:99:60,39:60:2280:39:1498:-105.291,0,-175.616 0/1:118:70,48:70:2690:48:1833:-129.697,0,-206.767 0/1:128:114,14:114:4306:14:531:-9.60095,0,-349.094 0/0:103:98,5:98:3688:5:190:0,-13.5397,-314.582 dDocent_Contig_9983 66 . C G 285.03 . AB=0.222222;ABP=45.2334;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=181;DPB=181;DPRA=1.0678;EPP=33.4109;EPPR=365.646;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.844311;PAO=0;PQA=0;PQR=0;PRO=0;QA=555;QR=6548;RO=167;RPL=14;RPP=33.4109;RPPR=365.646;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=167;SRP=365.646;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:911:0:0:0,-7.22472,-82.3025 0/0:54:54,0:54:2063:0:0:0,-16.2556,-185.905 0/0:22:22,0:22:891:0:0:0,-6.62266,-80.4948 0/0:18:18,0:18:728:0:0:0,-5.41854,-65.8452 0/1:31:25,6:25:987:6:244:-13.0069,0,-79.7934 0/1:32:24,8:24:968:8:311:-18.718,0,-77.7848 dDocent_Contig_9984 85 . G A 2011.8 . AB=0.228148;ABP=436.304;AC=2;AF=0.166667;AN=12;AO=207;CIGAR=1X;DP=1784;DPB=1784;DPRA=0;EPP=452.505;EPPR=3418.74;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=59.9816;NS=6;NUMALT=1;ODDS=0;PAIRED=0.942029;PAIREDR=0.922441;PAO=0;PQA=0;PQR=0;PRO=0;QA=5992;QR=42515;RO=1573;RPL=207;RPP=452.505;RPPR=3418.74;RPR=0;RUN=1;SAF=207;SAP=452.505;SAR=0;SRF=1573;SRP=3418.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:272:259,13:259:7012:13:342:0,-50.8435,-600.215 0/0:307:280,26:280:7447:26:736:0,-25.6856,-603.893 0/0:261:259,1:259:7095:1:35:0,-74.9791,-635.359 0/0:269:255,13:255:6808:13:358:0,-48.2708,-580.423 0/1:367:282,85:282:7751:85:2480:-112.956,0,-587.272 0/1:308:238,69:238:6402:69:2041:-91.4459,0,-483.868 dDocent_Contig_9985 94 . C G 36.0077 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=65;DPB=65;DPRA=0.765957;EPP=22.5536;EPPR=124.613;GTI=0;LEN=1;MEANALT=1;MQM=7;MQMR=7;NS=6;NUMALT=1;ODDS=4.33681e-19;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=297;QR=1912;RO=56;RPL=9;RPP=22.5536;RPPR=124.613;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=56;SRP=124.613;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:418:0:0:0,-3.61236,-7.62374 0/0:9:9,0:9:315:0:0:0,-2.70927,-5.73548 0/0:8:8,0:8:279:0:0:0,-2.40824,-5.10585 0/0:18:18,0:18:591:0:0:0,-5.41854,-11.3529 1/1:9:2,7:2:70:7:227:-3.12342,-1.38032,0 0/0:9:7,2:7:239:2:70:0,-1.38032,-3.14603 dDocent_Contig_9986 11 . T G 146863 . AB=0.807725;ABP=3878.66;AC=7;AF=0.583333;AN=12;AO=4631;CIGAR=1X;DP=5586;DPB=5586;DPRA=0;EPP=10059.1;EPPR=2074.59;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998488;PAIREDR=0.998952;PAO=0;PQA=0;PQR=0;PRO=0;QA=181121;QR=37905;RO=954;RPL=0;RPP=10059.1;RPPR=2074.59;RPR=4631;RUN=1;SAF=4631;SAP=10059.1;SAR=0;SRF=954;SRP=2074.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:786:127,659:127:4986:659:25743:-2078.26,0,-212.034 0/1:1032:176,855:176:7006:855:33362:-2689.42,0,-319.753 0/1:725:165,560:165:6553:560:21840:-1745.66,0,-371.254 1/1:874:49,825:49:1914:825:32334:-2734.92,-90.6269,0 0/1:1123:184,939:184:7334:939:36695:-2961.45,0,-321.653 0/1:1046:253,793:253:10112:793:31147:-2485.76,0,-594.556 dDocent_Contig_9987 46 . G T 1170.68 . AB=0.116505;ABP=134.585;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1M1I10M1X4M;DP=252;DPB=257.938;DPRA=0;EPP=33.4109;EPPR=339.589;GTI=0;LEN=1;MEANALT=6;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=2.77556e-17;PAIRED=0.857143;PAIREDR=0.767742;PAO=0;PQA=0;PQR=0;PRO=0;QA=509;QR=5740;RO=155;RPL=0;RPP=33.4109;RPPR=339.589;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=155;SRP=339.589;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:26:18,0,3,3,0:18:657:0,3,3,0:0,105,112,0:-3.78891,-9.20745,-62.9223,-0.639476,-54.3788,-53.4757,0,-53.7502,-45.2062,-52.8471,-9.20745,-62.9223,-54.3788,-53.7502,-62.9223 0|0:48:35,0,1,8,1:35:1298:0,1,8,1:0,34,289,33:-13.0892,-23.6252,-129.859,-20.8669,-127.101,-126.8,0,-106.274,-103.516,-103.866,-20.9575,-127.191,-124.434,-103.606,-126.89 1|0:29:5,2,8,11,0:5:188:2,8,11,0:18,296,421,0:-41.9416,-42.4493,-57.258,-19.2035,-33.6328,-32.2194,-8.84302,-23.286,0,-20.9674,-43.4468,-57.86,-34.6276,-24.2788,-58.8605 0|0:57:45,0,2,4,0:45:1679:0,2,4,0:0,74,151,0:0,-13.5463,-151.092,-7.47183,-145.037,-144.435,-1.11625,-138.714,-132.659,-137.51,-13.5463,-151.092,-145.037,-138.714,-151.092 0|0:43:32,0,0,8,0:32:1173:0,0,8,0:0,0,307,0:-15.6412,-25.2742,-121.15,-25.2742,-121.15,-121.15,0,-95.9468,-95.9468,-93.5385,-25.2742,-121.15,-121.15,-95.9468,-121.15 0|0:49:20,0,0,18,9:20:745:0,0,18,9:0,0,703,343:-51.8119,-57.8325,-118.819,-57.8325,-118.819,-118.819,0,-61.0136,-61.0136,-55.5951,-29.6892,-90.6793,-90.6793,-32.8669,-87.97 dDocent_Contig_9988 34 . T C 120.206 . AB=0.115385;ABP=170.047;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=406;DPB=406;DPRA=0.942029;EPP=35.5824;EPPR=852.056;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.969309;PAO=0;PQA=0;PQR=0;PRO=0;QA=596;QR=15390;RO=391;RPL=0;RPP=35.5824;RPPR=852.056;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=391;SRP=852.056;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:64:64,0:64:2482:0:0:0,-19.2659,-223.538 0/1:66:59,7:59:2322:7:277:-5.43144,0,-189.282 0/0:22:22,0:22:876:0:0:0,-6.62266,-79.1492 0/1:64:56,8:56:2241:8:319:-9.81101,0,-182.595 0/0:106:106,0:106:4199:0:0:0,-31.9092,-377.894 0/0:84:84,0:84:3270:0:0:0,-25.2865,-294.368 dDocent_Contig_9989 21 . C T 1009.37 . AB=0.258824;ABP=88.8984;AC=2;AF=0.166667;AN=12;AO=55;CIGAR=1X;DP=397;DPB=397;DPRA=3.9625;EPP=122.441;EPPR=745.654;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.927273;PAIREDR=0.953216;PAO=0;PQA=0;PQR=0;PRO=0;QA=2158;QR=13527;RO=342;RPL=0;RPP=122.441;RPPR=745.654;RPR=55;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=342;SRP=745.654;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:32,0:32:1271:0:0:0,-9.63296,-114.652 0/1:43:38,5:38:1518:5:205:-5.89072,0,-123.916 0/0:23:23,0:23:867:0:0:0,-6.92369,-78.33 0/0:25:25,0:25:979:0:0:0,-7.52575,-88.4096 0/0:147:136,11:136:5420:11:439:0,-4.38988,-447.783 0/1:127:88,39:88:3472:39:1514:-98.2676,0,-274.286 dDocent_Contig_9990 121 . C T 1291.73 . AB=0.375839;ABP=22.9616;AC=4;AF=0.4;AN=10;AO=56;CIGAR=1X;DP=156;DPB=156;DPRA=5.32143;EPP=124.613;EPPR=220.158;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1999;QR=3361;RO=100;RPL=0;RPP=124.613;RPPR=220.158;RPR=56;RUN=1;SAF=0;SAP=124.613;SAR=56;SRF=0;SRP=220.158;SRR=100;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:56:38,18:38:1236:18:649:-41.8826,0,-94.6699 0/1:67:34,33:34:1167:33:1166:-85.071,0,-85.1664 0/0:7:7,0:7:244:0:0:0,-2.10721,-22.3001 0/1:16:14,2:14:470:2:73:-2.11482,0,-37.8043 ./.:.:.:.:.:.:.:. 0/1:10:7,3:7:244:3:111:-7.34362,0,-19.2898 dDocent_Contig_9991 20 . T C 811.856 . AB=0.149733;ABP=401.563;AC=5;AF=0.416667;AN=12;AO=61;CIGAR=1X;DP=454;DPB=454;DPRA=0;EPP=135.47;EPPR=856.399;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.872774;PAO=0;PQA=0;PQR=0;PRO=0;QA=2440;QR=15551;RO=393;RPL=0;RPP=135.47;RPPR=856.399;RPR=61;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=393;SRP=856.399;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:90:81,9:81:3176:9:353:-5.03558,0,-258.831 0/1:112:98,14:98:3897:14:563:-17.2975,0,-316.998 0/1:111:90,21:90:3556:21:851:-43.4861,0,-286.657 0/0:80:75,5:75:2981:5:204:0,-5.33837,-249.635 0/1:27:19,8:19:760:8:307:-19.8561,0,-60.5879 0/1:34:30,4:30:1181:4:162:-4.73194,0,-96.3186 dDocent_Contig_9992 40 . T A 132.339 . AB=0.117647;ABP=24.5973;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=10M1X2M;DP=100;DPB=94.9231;DPRA=1.13333;EPP=7.35324;EPPR=202.786;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=3553;RO=92;RPL=0;RPP=7.35324;RPPR=202.786;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=92;SRP=202.786;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:4:4,0,0:4:155:0,0:0,0:0,-1.20412,-14.3251,-1.20412,-14.3251,-14.3251 0|0:22:22,0,0:22:839:0,0:0,0:0,-6.62266,-75.8264,-6.62266,-75.8264,-75.8264 0|0:22:22,0,0:22:862:0,0:0,0:0,-6.62266,-77.8983,-6.62266,-77.8983,-77.8983 0|0:12:12,0,0:12:463:0,0:0,0:0,-3.61236,-42.0212,-3.61236,-42.0212,-42.0212 0|0:23:17,6,0:17:653:6,0:226,0:-13.778,0,-52.1801,-18.8955,-53.9863,-72.5035 0|1:17:15,0,2:15:581:0,2:0,82:-2.66217,-7.17762,-54.8879,0,-48.1171,-47.515 dDocent_Contig_9993 209 . N G 121.769 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_9994 161 . G A 151.94 . AB=0.0793651;ABP=99.8304;AC=0;AF=0;AN=10;AO=13;CIGAR=1M2D10M1X7M;DP=318;DPB=306.19;DPRA=1.58865;EPP=31.2394;EPPR=611.023;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=5;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=492;QR=10916;RO=280;RPL=13;RPP=31.2394;RPPR=611.023;RPR=0;RUN=1;SAF=0;SAP=31.2394;SAR=13;SRF=0;SRP=611.023;SRR=280;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:65:55,3,0,4:55:2158:3,0,4:117,0,101:0,-6.90456,-183.586,-16.5566,-184.489,-194.106,-8.70909,-176.614,-186.23,-185.026 0|0:96:91,5,0,0:91:3547:5,0,0:190,0,0:0,-11.4332,-301.851,-27.3937,-303.356,-318.936,-27.3937,-303.356,-318.936,-318.936 0|0:63:41,5,9,8:41:1605:5,9,8:185,354,263:-16.796,-14.0041,-144.49,0,-116.875,-129.297,-7.91189,-124.757,-110.769,-137.479 0|0:87:86,0,0,0:86:3330:0,0,0:0,0,0:0,-25.8886,-299.728,-25.8886,-299.728,-299.728,-25.8886,-299.728,-299.728,-299.728 0|0:7:7,0,0,0:7:276:0,0,0:0,0,0:0,-2.10721,-25.2094,-2.10721,-25.2094,-25.2094,-2.10721,-25.2094,-25.2094,-25.2094 .:.:.:.:.:.:.:. dDocent_Contig_9995 73 . T A 345.771 . AB=0.296875;ABP=25.9465;AC=2;AF=0.166667;AN=12;AO=19;CIGAR=1X;DP=194;DPB=194;DPRA=0.984615;EPP=44.2683;EPPR=380.846;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.684211;PAIREDR=0.522989;PAO=0;PQA=0;PQR=0;PRO=0;QA=627;QR=6246;RO=174;RPL=0;RPP=44.2683;RPPR=36.7555;RPR=19;RUN=1;SAF=0;SAP=44.2683;SAR=19;SRF=113;SRP=36.7555;SRR=61;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:31,0:31:1109:0:0:0,-9.33193,-100.042 0/0:34:34,0:34:1200:0:0:0,-10.235,-108.294 0/0:35:35,0:35:1274:0:0:0,-10.536,-114.951 0/0:29:29,0:29:1040:0:0:0,-8.72987,-93.905 0/1:29:15,14:15:536:14:469:-33.8022,0,-39.8407 0/1:35:30,5:30:1087:5:158:-3.99602,0,-87.5998 dDocent_Contig_9996 231 . C A 52.4208 . AB=0.1875;ABP=16.582;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=124;DPB=124;DPRA=0.740741;EPP=9.52472;EPPR=265.758;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=8.67362e-19;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=121;QR=4766;RO=121;RPL=3;RPP=9.52472;RPPR=265.758;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=265.758;SRR=121;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:13,3:13:490:3:121:-6.46372,0,-39.6115 0/0:5:5,0:5:204:0:0:0,-1.50515,-18.744 0/0:2:2,0:2:67:0:0:0,-0.60206,-6.35967 0/0:8:8,0:8:312:0:0:0,-2.40824,-28.4394 0/0:55:55,0:55:2188:0:0:0,-16.5566,-197.099 0/0:38:38,0:38:1505:0:0:0,-11.4391,-135.699 dDocent_Contig_9997 22 . A G 512.215 . AB=0.128852;ABP=430.158;AC=4;AF=0.333333;AN=12;AO=48;CIGAR=1X1M1X;DP=563;DPB=563;DPRA=0.823636;EPP=107.241;EPPR=1119.15;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.875;PAIREDR=0.996109;PAO=0;PQA=0;PQR=0;PRO=0;QA=1910;QR=20431;RO=514;RPL=0;RPP=107.241;RPPR=1119.15;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=514;SRP=1119.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:78:66,12:66:2625:12:466:-18.8039,0,-212.904 0|1:95:86,9:86:3424:9:364:-4.52711,0,-279.622 0|1:77:62,15:62:2471:15:596:-30.7994,0,-199.36 0|1:107:96,10:96:3810:10:403:-4.31243,0,-310.606 0|0:96:94,2:94:3735:2:81:0,-21.2131,-328.494 0|0:110:110,0:110:4366:0:0:0,-33.1133,-392.915 dDocent_Contig_9998 10 . A T 129.841 . AB=0.140845;ABP=82.5596;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=225;DPB=225;DPRA=0.859504;EPP=29.068;EPPR=465.534;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=490;QR=8386;RO=213;RPL=0;RPP=29.068;RPPR=465.534;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=213;SRP=465.534;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:37,5:37:1460:5:205:-6.19175,0,-119.003 0/0:47:47,0:47:1853:0:0:0,-14.1484,-166.973 0/0:33:31,2:31:1187:2:81:0,-2.24826,-99.4087 0/1:29:24,5:24:951:5:204:-10.0142,0,-77.1638 0/0:44:44,0:44:1720:0:0:0,-13.2453,-155.022 0/0:30:30,0:30:1215:0:0:0,-9.0309,-109.621 dDocent_Contig_9999 123 . A C 140.767 . AB=0.466667;ABP=3.15506;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=131;DPB=131;DPRA=0.408602;EPP=22.5536;EPPR=267.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=304;QR=4294;RO=122;RPL=0;RPP=22.5536;RPPR=267.93;RPR=9;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=267.93;SRR=122;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:10:6,4:6:217:4:135:-9.473,0,-16.8714 0/0:23:21,2:21:755:2:69:0,-0.371027,-61.7238 0/1:5:2,3:2:72:3:100:-7.82522,0,-5.33149 0/0:34:34,0:34:1192:0:0:0,-10.235,-107.582 0/0:34:34,0:34:1179:0:0:0,-10.235,-106.409 0/0:25:25,0:25:879:0:0:0,-7.52575,-79.425 dDocent_Contig_10000 36 . A C 48.3131 . AB=0.142857;ABP=34.0313;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=84;DPB=84;DPRA=2.66667;EPP=13.8677;EPPR=174.557;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.835443;PAO=0;PQA=0;PQR=0;PRO=0;QA=201;QR=3127;RO=79;RPL=0;RPP=13.8677;RPPR=174.557;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=79;SRP=174.557;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:19,1:19:749:1:41:0,-1.92603,-63.6399 0/0:3:3,0:3:118:0:0:0,-0.90309,-11.0016 0/0:10:10,0:10:399:0:0:0,-3.0103,-36.2699 0/0:16:16,0:16:634:0:0:0,-4.81648,-57.3934 0/0:7:7,0:7:282:0:0:0,-2.10721,-25.7526 0/1:28:24,4:24:945:4:160:-6.35408,0,-76.9181 dDocent_Contig_10001 18 . T C 523.081 . AB=0.258824;ABP=45.9544;AC=1;AF=0.0833333;AN=12;AO=26;CIGAR=1X;DP=459;DPB=459;DPRA=0.842105;EPP=59.4686;EPPR=941.086;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997685;PAO=0;PQA=0;PQR=0;PRO=0;QA=1021;QR=17264;RO=432;RPL=0;RPP=59.4686;RPPR=941.086;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=432;SRP=941.086;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:51:46,4:46:1837:4:142:0,-2.14652,-152.443 0/1:85:63,22:63:2490:22:879:-53.831,0,-198.641 0/0:28:28,0:28:1122:0:0:0,-8.42884,-101.262 0/0:132:132,0:132:5293:0:0:0,-39.736,-476.205 0/0:90:90,0:90:3624:0:0:0,-27.0927,-326.173 0/0:73:73,0:73:2898:0:0:0,-21.9752,-260.92 dDocent_Contig_10002 47 . G A 193.516 . AB=0.444444;ABP=3.49285;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=102;DPB=102;DPRA=0.428571;EPP=20.3821;EPPR=190.127;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.904255;PAO=0;PQA=0;PQR=0;PRO=0;QA=303;QR=3716;RO=94;RPL=0;RPP=20.3821;RPPR=207.129;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=92;SRP=190.127;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:15:9,6:9:355:6:232:-16.7308,0,-27.7941 0/0:18:18,0:18:701:0:0:0,-5.41854,-63.4121 0/1:3:1,2:1:41:2:71:-5.83799,0,-3.19148 0/0:15:15,0:15:586:0:0:0,-4.51545,-53.0677 0/0:30:30,0:30:1183:0:0:0,-9.0309,-106.752 0/0:21:21,0:21:850:0:0:0,-6.32163,-76.812 dDocent_Contig_10004 57 . G A 3600.84 . AB=0.451049;ABP=8.96287;AC=6;AF=0.5;AN=12;AO=129;CIGAR=1X;DP=286;DPB=286;DPRA=0;EPP=283.13;EPPR=343.931;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5062;QR=6099;RO=157;RPL=129;RPP=283.13;RPPR=343.931;RPR=0;RUN=1;SAF=129;SAP=283.13;SAR=0;SRF=157;SRP=343.931;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:11,14:11:426:14:555:-42.7622,0,-31.1657 0/1:38:22,16:22:834:16:641:-46.5843,0,-63.9323 0/1:51:38,13:38:1497:13:514:-31.2518,0,-119.625 0/1:20:10,10:10:368:10:392:-29.6142,0,-27.4349 0/1:42:33,9:33:1304:9:312:-15.7553,0,-104.985 0/1:110:43,67:43:1670:67:2648:-205.338,0,-117.414 dDocent_Contig_10005 85 . C G 26437.8 . AB=0.11;ABP=795.685;AC=6;AF=0.5;AN=12;AO=66;CIGAR=2M1X8M1X1M;DP=2163;DPB=2254.54;DPRA=0;EPP=146.327;EPPR=730.454;GTI=0;LEN=1;MEANALT=10.5;MQM=60;MQMR=60;NS=6;NUMALT=8;ODDS=0;PAIRED=1;PAIREDR=0.98806;PAO=1.31111;PQA=28.4222;PQR=72.7222;PRO=2.61111;QA=2043;QR=11032;RO=335;RPL=66;RPP=146.327;RPPR=730.454;RPR=0;RUN=1;SAF=66;SAP=146.327;SAR=0;SRF=335;SRP=730.454;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:358:40,7,0,131,16,0,27,109,23:40:1332:7,0,131,16,0,27,109,23:241,0,4360,528,0,889,3538,734:-518.508,-510.974,-616.669,-530.549,-618.776,-638.352,-177.708,-265.936,-285.512,-246.077,-487.861,-576.088,-595.664,-242.823,-590.847,-530.549,-618.776,-638.352,-285.512,-595.664,-638.352,-458.693,-546.92,-566.496,-213.655,-523.807,-566.496,-558.368,-245.038,-333.266,-352.842,0,-310.153,-352.842,-280.985,-320.029,-471.433,-559.661,-579.236,-226.396,-536.548,-579.236,-507.38,-293.726,-572.312 1|0:395:28,15,33,103,23,0,56,118,8:28:910:15,33,103,23,0,56,118,8:467,1072,3340,782,0,1791,3738,262:-488.43,-459.355,-528.288,-410.344,-446.289,-473.859,-227.355,-263.299,-214.288,-269.797,-433.429,-469.373,-420.362,-237.373,-499.953,-496.859,-532.803,-483.793,-300.803,-506.877,-570.307,-352.578,-388.523,-339.512,-156.523,-362.596,-426.027,-409.169,-196.056,-232,-182.99,0,-206.074,-269.504,-125.224,-233.983,-475.693,-511.638,-462.627,-279.638,-485.712,-549.142,-404.861,-248.339,-546.733 1|0:349:55,37,22,104,0,0,9,104,0:55:1836:37,22,104,0,0,9,104,0:1208,716,3402,0,0,305,3286,0:-373.858,-292.864,-430.36,-332.615,-383.699,-474.626,-115.629,-166.714,-206.465,-232.957,-390.414,-441.498,-481.248,-264.264,-539.047,-390.414,-441.498,-481.248,-264.264,-539.047,-539.047,-365.682,-416.766,-456.516,-239.532,-514.315,-514.315,-511.606,-126.149,-177.233,-216.984,0,-274.783,-274.783,-250.051,-243.475,-390.414,-441.498,-481.248,-264.264,-539.047,-539.047,-514.315,-274.783,-539.047 1|0:461:26,61,8,116,10,0,9,219,0:26:825:61,8,116,10,0,9,219,0:2015,272,3848,326,0,292,6998,0:-800.771,-645.664,-693.705,-786.534,-690.004,-850.529,-497.304,-400.773,-541.644,-528.788,-782.276,-685.746,-826.616,-537.386,-845.67,-808.597,-712.067,-852.937,-563.707,-848.68,-875.001,-785.035,-688.505,-829.375,-540.145,-825.117,-851.438,-848.729,-244.893,-148.362,-289.232,0,-284.975,-311.296,-287.734,-245.371,-808.597,-712.067,-852.937,-563.707,-848.68,-875.001,-851.438,-311.296,-875.001 1|0:316:36,90,0,41,0,44,0,98,0:36:1197:90,0,41,0,44,0,98,0:2997,0,1344,0,1353,0,3166,0:-390.161,-158.442,-228.212,-400.998,-255.305,-497.86,-292.414,-146.721,-389.277,-376.934,-400.998,-255.305,-497.86,-389.277,-497.86,-292.509,-146.816,-389.371,-280.788,-389.371,-376.125,-400.998,-255.305,-497.86,-389.277,-497.86,-389.371,-497.86,-145.695,0,-242.557,-133.974,-242.557,-134.07,-242.557,-213.056,-400.998,-255.305,-497.86,-389.277,-497.86,-389.371,-497.86,-242.557,-497.86 0|1:284:150,48,0,36,0,22,22,0,0:150:4932:48,0,36,0,22,22,0,0:1588,0,1227,0,690,708,0,0:-83.2761,0,-384.151,-128.431,-398.601,-527.028,-28.8684,-299.042,-427.47,-416.633,-128.431,-398.601,-527.028,-427.47,-527.028,-72.9714,-343.141,-471.568,-372.01,-471.568,-464.945,-71.3521,-341.522,-469.949,-370.391,-469.949,-414.49,-463.327,-128.431,-398.601,-527.028,-427.47,-527.028,-471.568,-469.949,-527.028,-128.431,-398.601,-527.028,-427.47,-527.028,-471.568,-469.949,-527.028,-527.028 dDocent_Contig_10006 26 . G T 12628.8 . AB=0.544049;ABP=13.9146;AC=8;AF=0.666667;AN=12;AO=352;CIGAR=1X1M;DP=647;DPB=647;DPRA=0;EPP=767.369;EPPR=317.874;GTI=0;LEN=1;MEANALT=2.83333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13593;QR=5597;RO=145;RPL=0;RPP=767.369;RPPR=317.874;RPR=352;RUN=1;SAF=352;SAP=767.369;SAR=0;SRF=145;SRP=317.874;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:93:5,0,32,56:5:188:0,32,56:0,1228,2158:-261.069,-262.574,-277.974,-161.795,-177.194,-167.561,-85.3879,-100.787,0,-83.9294 0|1:159:46,2,14,97:46:1769:2,14,97:74,550,3749:-294.034,-301.828,-446.452,-262.644,-401.817,-403.656,0,-139.17,-99.9844,-116.022 1|1:144:14,4,50,75:14:548:4,50,75:152,1960,2907:-350.709,-342.458,-386.313,-193.749,-226.343,-223.757,-116.116,-148.709,0,-138.597 0|1:157:32,6,28,91:32:1219:6,28,91:229,1081,3518:-279.299,-270.148,-368.317,-200.158,-281.349,-291.704,0,-81.1899,-11.1973,-72.5801 0|1:46:19,6,5,16:19:732:6,5,16:223,199,605:-43.8668,-31.3402,-89.6338,-33.1964,-75.0519,-91.7939,0,-41.8542,-43.711,-55.2831 0|1:48:29,0,2,17:29:1141:0,2,17:0,80,656:-45.1261,-53.856,-147.719,-47.2645,-141.128,-140.526,0,-93.853,-87.2626,-88.7355 dDocent_Contig_10007 55 . A G 40.9505 . AB=0.116279;ABP=58.0041;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=279;DPB=279;DPRA=0.964789;EPP=24.725;EPPR=587.136;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.832714;PAO=0;PQA=0;PQR=0;PRO=0;QA=401;QR=10395;RO=269;RPL=10;RPP=24.725;RPPR=587.136;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=269;SRP=587.136;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:36,3:36:1416:3:122:0,-0.367677,-116.327 0/0:55:53,2:53:1980:2:77:0,-9.24782,-171.086 0/0:23:23,0:23:872:0:0:0,-6.92369,-78.7803 0/1:43:38,5:38:1493:5:202:-5.61758,0,-121.677 0/0:41:41,0:41:1617:0:0:0,-12.3422,-145.766 0/0:78:78,0:78:3017:0:0:0,-23.4803,-271.635 dDocent_Contig_10008 24 . C T 75.0737 . AB=0.139535;ABP=51.5402;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=285;DPB=285;DPRA=0.770186;EPP=20.3821;EPPR=602.337;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.876812;PAO=0;PQA=0;PQR=0;PRO=0;QA=316;QR=11039;RO=276;RPL=0;RPP=20.3821;RPPR=602.337;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=276;SRP=602.337;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:35,1:35:1401:1:36:0,-7.2388,-122.743 0/0:45:44,1:44:1726:1:40:0,-9.55067,-151.549 0/0:62:62,0:62:2500:0:0:0,-18.6639,-225.129 0/1:43:37,6:37:1487:6:240:-9.03025,0,-121.13 0/0:47:46,0:46:1827:0:0:0,-13.8474,-164.234 0/0:52:52,0:52:2098:0:0:0,-15.6536,-188.996 dDocent_Contig_10009 18 . T A 388.478 . AB=0.185185;ABP=95.9815;AC=1;AF=0.0833333;AN=12;AO=34;CIGAR=1X;DP=530;DPB=530;DPRA=0.809524;EPP=76.8404;EPPR=1080.06;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993952;PAO=0;PQA=0;PQR=0;PRO=0;QA=1362;QR=19295;RO=496;RPL=0;RPP=76.8404;RPPR=1080.06;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=496;SRP=1080.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:108:88,20:88:3484:20:803:-40.0697,0,-281.109 0/0:91:87,4:87:3436:4:160:0,-12.6103,-294.536 0/0:82:76,6:76:2938:6:240:0,-2.70901,-242.572 0/0:71:70,1:70:2716:1:38:0,-17.5759,-240.787 0/0:105:105,0:105:4035:0:0:0,-31.6081,-363.18 0/0:73:70,3:70:2686:3:121:0,-10.695,-230.616 dDocent_Contig_10011 44 . T C 3784.08 . AB=0.40118;ABP=31.7647;AC=4;AF=0.333333;AN=12;AO=136;CIGAR=1X;DP=349;DPB=349;DPRA=16.95;EPP=298.331;EPPR=463.362;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5406;QR=8422;RO=212;RPL=0;RPP=298.331;RPPR=463.362;RPR=136;RUN=1;SAF=136;SAP=298.331;SAR=0;SRF=212;SRP=463.362;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:70:45,25:45:1806:25:985:-67.8778,0,-141.683 0/1:86:46,40:46:1844:40:1590:-117.434,0,-140.281 0/1:77:26,50:26:1035:50:1991:-156.313,0,-70.3667 0/1:106:85,21:85:3357:21:840:-44.0045,0,-270.282 0/0:4:4,0:4:150:0:0:0,-1.20412,-13.8653 0/0:6:6,0:6:230:0:0:0,-1.80618,-21.0633 dDocent_Contig_10012 15 . C T 123.251 . AB=0.222222;ABP=21.1059;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=332;DPB=332;DPRA=0.442623;EPP=16.0391;EPPR=710.91;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.935583;PAO=0;PQA=0;PQR=0;PRO=0;QA=240;QR=12915;RO=326;RPL=0;RPP=16.0391;RPPR=710.91;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=326;SRP=710.91;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:81:81,0:81:3172:0:0:0,-24.3834,-285.57 0/0:81:81,0:81:3234:0:0:0,-24.3834,-291.14 0/0:55:55,0:55:2184:0:0:0,-16.5566,-196.74 0/0:69:69,0:69:2719:0:0:0,-20.7711,-244.835 0/0:19:19,0:19:758:0:0:0,-5.71957,-68.5411 0/1:27:21,6:21:848:6:240:-13.848,0,-68.5047 dDocent_Contig_10013 76 . C A 383.736 . AB=0.5;ABP=3.0103;AC=1;AF=0.1;AN=10;AO=14;CIGAR=1X;DP=189;DPB=189;DPRA=0.695652;EPP=33.4109;EPPR=383.018;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=534;QR=6844;RO=175;RPL=14;RPP=33.4109;RPPR=383.018;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=175;SRP=383.018;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:614:0:0:0,-4.81648,-55.598 0/1:28:14,14:14:541:14:534:-39.9756,0,-40.6061 0/0:12:12,0:12:477:0:0:0,-3.61236,-43.2781 0/0:68:68,0:68:2684:0:0:0,-20.47,-241.687 ./.:.:.:.:.:.:.:. 0/0:65:65,0:65:2528:0:0:0,-19.5669,-227.71 dDocent_Contig_10014 46 . C T 3496.88 . AB=0.323741;ABP=115.536;AC=6;AF=0.5;AN=12;AO=135;CIGAR=1X;DP=417;DPB=417;DPRA=0;EPP=296.159;EPPR=604.539;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.955556;PAIREDR=0.918149;PAO=0;PQA=0;PQR=0;PRO=0;QA=5386;QR=11242;RO=281;RPL=0;RPP=296.159;RPPR=604.539;RPR=135;RUN=1;SAF=135;SAP=296.159;SAR=0;SRF=281;SRP=613.194;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:82:71,10:71:2839:10:408:-12.2879,0,-230.817 0/1:125:90,35:90:3613:35:1406:-89.1663,0,-287.559 0/1:47:40,7:40:1599:7:249:-8.59635,0,-129.99 0/1:75:54,21:54:2147:21:841:-53.426,0,-170.819 0/1:49:17,32:17:681:32:1287:-101.346,0,-46.8675 0/1:39:9,30:9:363:30:1195:-96.0866,0,-21.2935 dDocent_Contig_10015 7 . A C 51.3897 . AB=0.138889;ABP=43.7857;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X3M2D1M;DP=160;DPB=158.571;DPRA=1.45161;EPP=13.8677;EPPR=330.903;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.2;PAIREDR=0.615894;PAO=0;PQA=0;PQR=0;PRO=0;QA=186;QR=5830;RO=151;RPL=0;RPP=13.8677;RPPR=330.903;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=151;SRP=330.903;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:24:23,0:23:901:0:0:0,-6.92369,-80.9974 0|0:23:22,0:22:848:0:0:0,-6.62266,-76.241 0|0:15:15,0:15:583:0:0:0,-4.51545,-52.8106 0|0:36:36,0:36:1397:0:0:0,-10.8371,-126.004 0|1:36:29,5:29:1113:5:186:-6.66185,0,-90.0827 0|0:26:26,0:26:988:0:0:0,-7.82678,-89.2301 dDocent_Contig_10016 53 . C T 804.076 . AB=0.204301;ABP=144.273;AC=6;AF=0.5;AN=12;AO=38;CIGAR=1X4M;DP=202;DPB=202;DPRA=0;EPP=85.5263;EPPR=339.589;GTI=0;LEN=1;MEANALT=1.6;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1471;QR=5699;RO=155;RPL=38;RPP=85.5263;RPPR=339.589;RPR=0;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=155;SRP=339.589;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:36:28,0,8:28:1023:0,8:0,297:-16.2429,-24.6718,-108.254,0,-83.952,-81.5437 0|1:58:45,0,13:45:1630:0,13:0,503:-28.1589,-41.7053,-174.757,0,-133.433,-129.519 0|1:18:16,0,2:16:602:0,2:0,82:-2.36114,-7.17762,-56.4737,0,-49.7018,-49.0997 0|1:47:32,0,13:32:1169:0,13:0,511:-32.675,-42.308,-137.826,0,-95.7811,-91.8677 0|1:16:14,2,0:14:525:2,0:76,0:-2.39833,0,-42.7747,-6.61275,-43.3767,-49.6104 0|1:27:20,5,2:20:750:5,2:192,78:-9.73644,0,-59.9127,-9.34358,-55.0048,-70.1658 dDocent_Contig_10018 14 . C T 244.894 . AB=0.105541;ABP=515.231;AC=4;AF=0.333333;AN=12;AO=41;CIGAR=1X;DP=855;DPB=855;DPRA=0.457692;EPP=92.0407;EPPR=1770.59;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997543;PAO=0;PQA=0;PQR=0;PRO=0;QA=1621;QR=32390;RO=814;RPL=0;RPP=92.0407;RPPR=1770.59;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=814;SRP=1770.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:88:80,8:80:3165:8:306:-1.40741,0,-258.437 0/1:144:125,19:125:4951:19:762:-25.5525,0,-402.144 0/1:52:47,5:47:1894:5:193:-2.08468,0,-155.008 0/1:95:87,8:87:3474:8:320:-0.569823,0,-284.095 0/0:216:215,1:215:8564:1:40:0,-61.0268,-766.255 0/0:260:260,0:260:10342:0:0:0,-78.2678,-930.133 dDocent_Contig_10019 14 . A T 4542.48 . AB=0.0429752;ABP=1100.62;AC=0;AF=0;AN=12;AO=26;CIGAR=2M1X6M1X2M1X2M1X4M;DP=605;DPB=590.5;DPRA=0;EPP=59.4686;EPPR=141.985;GTI=0;LEN=1;MEANALT=18.1667;MQM=26;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=0;PAIREDR=0.9375;PAO=0;PQA=0;PQR=0;PRO=0;QA=676;QR=2477;RO=64;RPL=0;RPP=59.4686;RPPR=141.985;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=64;SRP=141.985;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:68:12,8,14,3,9,0,0,2,0,0:12:458:8,14,3,9,0,0,2,0,0:316,554,71,323,0,0,76,0,0:-41.5543,-21.1277,-56.3036,0,-13.5481,-33.3737,-40.4966,-54.0414,-32.918,-77.1746,-21.2032,-34.749,-13.6238,-54.1161,-56.0769,-45.1667,-58.7118,-37.5881,-78.0777,-58.7861,-82.7488,-45.1667,-58.7118,-37.5881,-78.0777,-58.7861,-82.7488,-82.7488,-39.25,-52.7954,-31.6712,-72.1616,-52.8698,-76.8326,-76.8326,-76.2305,-45.1667,-58.7118,-37.5881,-78.0777,-58.7861,-82.7488,-82.7488,-76.8326,-82.7488,-45.1667,-58.7118,-37.5881,-78.0777,-58.7861,-82.7488,-82.7488,-76.8326,-82.7488,-82.7488 0|0:128:14,12,20,8,15,0,0,0,14,1:14:548:12,20,8,15,0,0,0,14,1:453,794,201,525,0,0,0,549,36:-60.4498,-29.8887,-71.3434,-0.0911494,-10.384,-39.1397,-51.1517,-61.4434,-31.6478,-93.8089,-25.4263,-35.7186,-5.92164,-56.9813,-65.9777,-64.6643,-74.9558,-45.1603,-96.2171,-70.4931,-109.73,-64.6643,-74.9558,-45.1603,-96.2171,-70.4931,-109.73,-109.73,-64.6643,-74.9558,-45.1603,-96.2171,-70.4931,-109.73,-109.73,-109.73,-19.5052,-29.7976,0,-51.0605,-25.3352,-64.5731,-64.5731,-64.5731,-60.3587,-61.856,-72.1476,-42.352,-93.409,-67.685,-106.922,-106.922,-106.922,-61.7649,-106.621 0|0:107:19,13,19,5,6,0,8,9,10,0:19:726:13,19,5,6,0,8,9,10,0:492,743,130,216,0,152,353,394,0:-55.0792,-23.5216,-79.1869,0,-22.3053,-53.8632,-51.9612,-74.2628,-50.7451,-110.031,-44.7891,-67.0912,-43.573,-95.5281,-102.56,-60.7987,-83.1003,-59.5827,-111.537,-104.366,-120.374,-51.6901,-73.9913,-50.474,-102.427,-95.256,-111.264,-108.856,-32.3126,-54.6156,-31.0964,-83.0533,-75.8819,-91.891,-82.7812,-89.1817,-28.3732,-50.6764,-27.157,-79.1144,-71.9429,-87.9522,-78.8424,-59.4674,-84.9419,-60.7987,-83.1003,-59.5827,-111.537,-104.366,-120.374,-111.264,-91.891,-87.9522,-120.374 0|0:116:4,25,38,4,21,0,4,0,0,0:4:157:25,38,4,21,0,4,0,0,0:964,1484,104,730,0,76,0,0,0:-179.281,-107.234,-112.623,-60.3496,0,-61.827,-173.415,-113.08,-66.1965,-185.125,-126.439,-66.1021,-19.2134,-132.284,-133.032,-180.486,-120.149,-73.2662,-186.329,-139.353,-193.4,-175.93,-115.595,-68.7124,-181.774,-134.799,-188.844,-187.64,-180.486,-120.149,-73.2662,-186.329,-139.353,-193.4,-188.844,-193.4,-180.486,-120.149,-73.2662,-186.329,-139.353,-193.4,-188.844,-193.4,-193.4,-180.486,-120.149,-73.2662,-186.329,-139.353,-193.4,-188.844,-193.4,-193.4,-193.4 0|0:101:8,0,7,1,9,22,12,2,0,13:8:314:0,7,1,9,22,12,2,0,13:0,273,33,356,762,228,76,0,475:-64.5951,-67.0033,-92.8353,-44.9542,-70.7872,-68.68,-64.6052,-90.4373,-68.3891,-90.1362,-38.7526,-64.5859,-42.5367,-62.1878,-61.8766,-10.3982,-36.2325,-14.1827,-33.8345,-7.98081,-29.6099,-53.3387,-79.1697,-57.1226,-76.7719,-50.9216,-22.5733,-75.5573,-60.8116,-86.6438,-64.5955,-84.2458,-58.3942,-30.0407,-72.9785,-86.0418,-67.0033,-92.8353,-70.7872,-90.4373,-64.5859,-36.2325,-79.1697,-86.6438,-92.8353,-30.7711,-56.6046,-34.5553,-54.2066,-28.3536,0,-42.9418,-50.4129,-56.6046,-52.6912 0|0:85:7,0,4,5,1,25,7,1,0,5:7:274:0,4,5,1,25,7,1,0,5:0,150,137,36,897,133,39,0,199:-64.4548,-66.5621,-89.1001,-54.3907,-76.9296,-75.7254,-57.0931,-79.6313,-67.4608,-78.1262,-63.8935,-86.4317,-74.2611,-76.9629,-86.1306,0,-22.5435,-10.3705,-13.0752,-19.8747,-15.0178,-58.5915,-81.1291,-68.9589,-71.6615,-78.4608,-14.5768,-79.0219,-63.5433,-86.0815,-73.9109,-76.6127,-83.413,-19.5244,-78.1106,-85.7805,-66.5621,-89.1001,-76.9296,-79.6313,-86.4317,-22.5435,-81.1291,-86.0815,-89.1001,-50.187,-72.7262,-60.5551,-63.2573,-70.0577,-6.16577,-64.7555,-69.7075,-72.7262,-71.2211 dDocent_Contig_10021 12 . A T 7890.5 . AB=0.0463822;ABP=966.358;AC=0;AF=0;AN=12;AO=25;CIGAR=6M1X4M;DP=915;DPB=915.818;DPRA=0;EPP=57.2971;EPPR=1201.66;GTI=0;LEN=1;MEANALT=4.66667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.985507;PAO=0;PQA=0;PQR=0;PRO=0;QA=1003;QR=21532;RO=552;RPL=0;RPP=57.2971;RPPR=1201.66;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=552;SRP=1201.66;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:106:58,0,0,47:58:2246:0,0,47:0,0,1865:-136.056,-153.516,-338.01,-153.516,-338.01,-338.01,0,-184.497,-184.497,-170.348 0|0:123:76,0,0,40:76:2957:0,0,40:0,0,1595:-108.504,-131.382,-374.389,-131.382,-374.389,-374.389,0,-243.043,-243.043,-231.001 0|0:147:123,0,0,17:123:4811:0,0,17:0,0,682:-19.1789,-56.2056,-451.755,-56.2056,-451.755,-451.755,0,-395.565,-395.565,-390.448 0|0:113:77,0,5,29:77:3016:0,5,29:0,203,1169:-73.1741,-96.3534,-344.35,-79.6105,-327.607,-326.102,0,-247.994,-231.251,-239.264 0|0:250:124,1,5,107:124:4830:1,5,107:39,204,4313:-318.177,-352.298,-748.965,-338.673,-732.434,-734.135,0,-393.769,-380.142,-364.764 0|0:176:94,10,15,52:94:3672:10,15,52:386,596,2104:-145.182,-141.78,-440.642,-124.421,-394.593,-421.778,0,-270.176,-252.817,-286.223 dDocent_Contig_10022 12 . A C 7005.43 . AB=0.105516;ABP=1130.31;AC=1;AF=0.0833333;AN=12;AO=88;CIGAR=6M1X15M;DP=834;DPB=841.818;DPRA=0;EPP=194.1;EPPR=313.531;GTI=0;LEN=1;MEANALT=20.6667;MQM=59.125;MQMR=56.1049;NS=6;NUMALT=9;ODDS=0;PAIRED=0.647727;PAIREDR=0.713287;PAO=0;PQA=0;PQR=0;PRO=0;QA=3235;QR=5604;RO=143;RPL=0;RPP=194.1;RPPR=313.531;RPR=88;RUN=1;SAF=88;SAP=194.1;SAR=0;SRF=143;SRP=313.531;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:120:9,9,1,2,31,3,5,2,7,30:9:348:9,1,2,31,3,5,2,7,30:353,41,81,1149,120,200,82,251,1166:-158.516,-132.194,-158.069,-157.841,-157.394,-186.124,-155.337,-154.89,-180.537,-183.319,-67.2183,-66.7713,-92.4182,-89.915,-86.4708,-151.339,-150.892,-176.539,-174.035,-85.9166,-179.02,-144.75,-144.303,-169.95,-167.446,-79.3274,-163.448,-171.829,-154.456,-154.009,-179.656,-177.153,-89.0337,-173.154,-166.565,-182.438,-140.766,-140.319,-165.966,-163.462,-75.344,-159.464,-152.875,-162.581,-167.243,-65.4234,-64.9765,-90.624,-88.1207,0,-84.1222,-77.5329,-87.2394,-73.5493,-84.9776 0|0:133:25,6,3,12,5,3,10,8,4,23:25:985:6,3,12,5,3,10,8,4,23:236,117,469,184,117,386,320,152,904:-66.8326,-54.944,-130.918,-64.7406,-123.107,-141.618,-39.9889,-98.3545,-108.151,-114.156,-59.3147,-117.681,-127.477,-102.725,-135.59,-64.7406,-123.107,-132.903,-108.151,-127.477,-141.618,-42.6651,-101.031,-110.828,-86.0758,-105.402,-110.828,-117.435,-47.9972,-106.363,-116.16,-91.4079,-110.734,-116.16,-94.0847,-123.369,-61.9173,-120.283,-130.08,-105.328,-124.654,-130.08,-108.005,-113.337,-138.493,0,-58.3672,-68.1639,-43.4119,-62.738,-68.1639,-46.0882,-51.4204,-65.3406,-70.8581 0|0:134:54,2,1,0,19,4,3,5,15,9:54:2124:2,1,0,19,4,3,5,15,9:79,40,0,672,159,120,205,561,346:-38.4657,-48.2199,-211.981,-51.4258,-209.287,-215.487,-54.7213,-212.583,-215.788,-219.084,0,-157.86,-161.066,-164.362,-158.642,-41.6288,-199.491,-202.697,-205.992,-151.27,-204.788,-44.8352,-202.697,-205.903,-209.198,-154.476,-196.107,-208.295,-37.7978,-195.661,-198.866,-202.162,-147.439,-189.07,-192.276,-200.656,-8.78764,-166.65,-169.856,-173.152,-118.43,-160.06,-163.266,-156.229,-168.636,-26.317,-184.18,-187.385,-190.681,-135.959,-177.589,-180.795,-173.759,-144.748,-187.972 0|0:119:15,1,6,3,20,3,3,3,17,19:15:582:1,6,3,20,3,3,3,17,19:35,227,118,745,121,120,123,631,753:-74.4164,-76.0843,-119.817,-60.3232,-101.509,-102.551,-70.2236,-111.41,-95.6487,-113.354,-17.9504,-59.1362,-43.375,-53.2755,-55.9631,-68.9568,-110.143,-94.382,-104.282,-52.0086,-112.088,-69.0464,-110.233,-94.4716,-104.372,-52.0983,-103.105,-112.177,-68.7786,-109.965,-94.2038,-104.104,-51.8304,-102.838,-102.927,-111.909,-27.3397,-68.5256,-52.7644,-62.6649,-10.3913,-61.398,-61.4877,-61.2198,-66.2556,-16.9488,-58.1354,-42.3739,-52.2746,0,-51.0077,-51.0973,-50.8295,-9.38961,-55.2634 0|1:172:20,0,1,0,57,14,7,1,31,15:20:779:0,1,0,57,14,7,1,31,15:0,36,0,2119,558,283,40,1127,602:-197.162,-203.183,-265.446,-200.246,-262.509,-262.208,-203.183,-265.446,-262.509,-265.446,-29.7697,-92.0326,-89.0953,-92.0326,-74.8739,-157.229,-219.493,-216.556,-219.493,-46.0787,-215.278,-179.849,-242.113,-239.175,-242.113,-68.6989,-196.16,-240.006,-199.888,-262.151,-259.213,-262.151,-88.7373,-216.198,-238.818,-261.85,-111.148,-173.411,-170.473,-173.411,0,-127.457,-150.077,-170.115,-164.079,-153.639,-215.902,-212.965,-215.902,-42.4879,-169.949,-192.569,-212.607,-123.867,-211.387 0|0:156:20,0,6,1,54,2,3,8,14,25:20:786:0,6,1,54,2,3,8,14,25:0,238,33,1988,79,122,320,513,998:-176.372,-182.393,-244.688,-162.801,-225.096,-223.29,-179.832,-242.126,-222.535,-241.825,-19.853,-82.1476,-62.5556,-79.5865,-65.8919,-175.891,-238.186,-218.595,-235.625,-75.6463,-237.584,-172.329,-234.624,-215.032,-232.062,-72.0835,-228.123,-233.721,-156.034,-218.329,-198.737,-215.767,-55.7882,-211.827,-208.265,-215.92,-140.49,-202.785,-183.193,-200.224,-40.2463,-196.284,-192.721,-176.426,-198.571,-100.246,-162.542,-142.95,-159.981,0,-156.041,-152.478,-136.183,-120.639,-155.016 dDocent_Contig_10023 9 . A G 10017.2 . AB=0.574257;ABP=32.0349;AC=2;AF=0.166667;AN=12;AO=348;CIGAR=1X;DP=877;DPB=877;DPRA=4.47232;EPP=758.683;EPPR=1151.72;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13195;QR=20241;RO=529;RPL=0;RPP=758.683;RPPR=1151.72;RPR=348;RUN=1;SAF=348;SAP=758.683;SAR=0;SRF=529;SRP=1151.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:62:62,0:62:2382:0:0:0,-18.6639,-214.589 0/0:26:26,0:26:983:0:0:0,-7.82678,-88.7768 0/0:75:75,0:75:2868:0:0:0,-22.5772,-258.298 0/0:108:108,0:108:4141:0:0:0,-32.5112,-372.774 0/1:298:127,171:127:4866:171:6483:-493.669,0,-348.26 0/1:308:131,177:131:5001:177:6712:-511.268,0,-357.398 dDocent_Contig_10024 107 . N C 4755.38 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=159;CIGAR=1X;DP=159;DPB=159;DPRA=0;EPP=348.274;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5254;QR=0;RO=0;RPL=0;RPP=348.274;RPPR=0;RPR=159;RUN=1;SAF=0;SAP=348.274;SAR=159;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:25:0,25:0:0:25:828:-74.8266,-7.52575,0 1/1:10:0,10:0:0:10:342:-31.1109,-3.0103,0 1/1:11:0,11:0:0:11:355:-32.2642,-3.31133,0 1/1:23:0,23:0:0:23:749:-67.7146,-6.92369,0 1/1:56:0,56:0:0:56:1840:-165.876,-16.8577,0 1/1:34:0,34:0:0:34:1140:-102.9,-10.235,0 dDocent_Contig_10025 8 . T A 241.275 . AB=0.162162;ABP=76.3709;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=2M1X9M;DP=153;DPB=154.083;DPRA=0.890909;EPP=31.2394;EPPR=278.787;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.905512;PAO=0;PQA=0;PQR=0;PRO=0;QA=488;QR=4965;RO=127;RPL=0;RPP=31.2394;RPPR=278.787;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=127;SRP=278.787;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:19:11,3,5:11:422:3,5:116,186:-11.9037,-5.68131,-39.4225,0,-25.105,-33.1288 0|0:44:30,8,6:30:1186:8,6:299,233:-15.4428,0,-95.2008,-5.32157,-78.4643,-101.136 0|0:11:9,1,1:9:348:1,1:39,30:-0.541458,0,-28.3596,-0.896998,-26.2707,-29.1759 0|0:24:23,0,1:23:897:0,1:0,39:0,-6.92369,-80.6541,-3.32816,-77.4482,-77.1472 0|0:31:31,0,0:31:1215:0,0:0,0:0,-9.33193,-109.639,-9.33193,-109.639,-109.639 0|0:24:23,1,0:23:897:1,0:39,0:0,-3.32816,-77.1486,-6.92369,-77.4496,-80.6555 dDocent_Contig_10026 1 . N G 186.821 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=3.44459;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0.6;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=190;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=3;SAP=3.44459;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:2:0,2:0:0:2:75:-7.1188,-0.60206,0 dDocent_Contig_10027 70 . A G 2873.23 . AB=0.0630631;ABP=187.077;AC=0;AF=0;AN=12;AO=7;CIGAR=1X3M1X;DP=296;DPB=296;DPRA=0;EPP=18.2106;EPPR=361.303;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.285714;PAIREDR=0.448485;PAO=0;PQA=0;PQR=0;PRO=0;QA=248;QR=5804;RO=165;RPL=7;RPP=18.2106;RPPR=361.303;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=165;SRP=361.303;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:67:20,4,41:20:671:4,41:143,1437:-110.901,-105.261,-158.398,0,-42.6633,-41.984 0|0:61:37,0,24:37:1306:0,24:0,848:-58.2769,-69.415,-175.766,0,-106.704,-99.4794 0|0:29:15,0,14:15:546:0,14:0,480:-34.7955,-39.311,-83.9204,0,-44.9624,-40.7479 0|0:44:26,3,15:26:943:3,15:105,542:-36.4204,-35.7061,-111.803,0,-68.4686,-72.4948 0|0:52:37,0,14:37:1287:0,14:0,498:-29.5443,-40.6824,-145.32,0,-104.733,-100.519 0|0:43:30,0,13:30:1051:0,13:0,458:-28.6065,-37.6374,-123.149,0,-85.8633,-81.9499 dDocent_Contig_10028 98 . N A 65.5375 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=69;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 dDocent_Contig_10033 12 . T A 4580.76 . AB=0.547486;ABP=6.5162;AC=7;AF=0.583333;AN=12;AO=143;CIGAR=1X;DP=224;DPB=224;DPRA=0;EPP=313.531;EPPR=178.9;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.979021;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5771;QR=3262;RO=81;RPL=0;RPP=313.531;RPPR=178.9;RPR=143;RUN=1;SAF=143;SAP=313.531;SAR=0;SRF=81;SRP=178.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:53:29,24:29:1177:24:954:-70.2061,0,-90.2481 0/1:45:13,32:13:517:32:1298:-103.534,0,-33.3289 0/1:27:24,3:24:962:3:120:-3.0595,0,-78.7483 0/1:41:9,32:9:364:32:1289:-103.931,0,-20.7817 1/1:45:0,45:0:0:45:1827:-164.631,-13.5464,0 0/1:13:6,7:6:242:7:283:-21.9296,0,-18.2436 dDocent_Contig_10034 10 . T C 50.3046 . AB=0.0923077;ABP=284.533;AC=1;AF=0.0833333;AN=12;AO=41;CIGAR=1X;DP=887;DPB=887;DPRA=0;EPP=92.0407;EPPR=1790.39;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=54.9881;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.550415;PAO=0;PQA=0;PQR=0;PRO=0;QA=1628;QR=33891;RO=843;RPL=0;RPP=92.0407;RPPR=1833.56;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=838;SRP=1790.39;SRR=5;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:105:101,4:101:4049:4:160:0,-16.8247,-333.297 0/0:198:187,10:187:7506:10:400:0,-23.3455,-589.919 0/0:73:72,1:72:2917:1:41:0,-17.8806,-237.7 0/0:140:135,5:135:5419:5:184:0,-25.2316,-458.329 0/1:195:176,18:176:7073:18:720:-6.55333,0,-552.506 0/0:176:172,3:172:6927:3:123:0,-41.6101,-571.677 dDocent_Contig_10035 146 . C T 195.318 . AB=0.6;ABP=3.87889;AC=3;AF=0.25;AN=12;AO=7;CIGAR=1X;DP=200;DPB=200;DPRA=0.116402;EPP=18.2106;EPPR=422.104;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=8.67362e-19;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=257;QR=7615;RO=193;RPL=0;RPP=18.2106;RPPR=422.104;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=422.104;SRR=193;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:27:-2.69978,-0.30103,0 0/1:10:4,6:4:126:6:230:-18.0533,0,-8.63418 0/0:19:19,0:19:740:0:0:0,-5.71957,-66.9222 0/0:16:16,0:16:646:0:0:0,-4.81648,-58.4743 0/0:47:47,0:47:1840:0:0:0,-14.1484,-165.805 0/0:107:107,0:107:4263:0:0:0,-32.2102,-383.632 dDocent_Contig_10036 51 . A G 55.8985 . AB=0.162791;ABP=45.4803;AC=1;AF=0.1;AN=10;AO=7;CIGAR=1X;DP=150;DPB=150;DPRA=1.60748;EPP=18.2106;EPPR=313.531;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=217;QR=5276;RO=143;RPL=7;RPP=18.2106;RPPR=313.531;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=143;SRP=313.531;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:43:36,7:36:1337:7:217:-6.89043,0,-107.675 0/0:25:25,0:25:914:0:0:0,-7.52575,-82.573 0/0:36:36,0:36:1341:0:0:0,-10.8371,-120.978 0/0:45:45,0:45:1648:0:0:0,-13.5463,-148.584 ./.:.:.:.:.:.:.:. 0/0:1:1,0:1:36:0:0:0,-0.30103,-3.59827 dDocent_Contig_10037 61 . A T 5072.32 . AB=0.0440252;ABP=290.15;AC=0;AF=0;AN=12;AO=7;CIGAR=5M2X4M;DP=385;DPB=383;DPRA=0;EPP=18.2106;EPPR=361.303;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.714286;PAIREDR=0.666667;PAO=0;PQA=0;PQR=0;PRO=0;QA=260;QR=6049;RO=165;RPL=7;RPP=18.2106;RPPR=361.303;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=165;SRP=361.303;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:69:44,0,0,25:44:1612:0,0,25:0,0,896:-60.1849,-73.4303,-205.19,-73.4303,-205.19,-205.19,0,-132.12,-132.12,-124.595 0|0:77:25,4,2,46:25:902:4,2,46:154,73,1654:-127.391,-122.27,-194.678,-128.952,-189.917,-201.961,0,-60.9498,-67.6332,-59.7503 0|0:62:38,2,0,21:38:1414:2,0,21:76,0,768:-51.294,-56.499,-171.64,-62.7332,-172.242,-178.475,0,-109.498,-115.732,-109.41 0|0:82:37,5,5,35:37:1357:5,5,35:194,187,1286:-93.9697,-89.1656,-198.576,-89.7949,-184.768,-199.204,0,-94.9625,-95.5917,-100.369 0|0:54:9,6,0,37:9:325:6,0,37:228,0,1426:-114.421,-98.4322,-123.148,-117.131,-124.955,-143.653,0,-7.82199,-26.5353,-15.3972 0|0:41:12,5,0,24:12:439:5,0,24:182,0,912:-71.1929,-59.9457,-94.3087,-74.8052,-95.8139,-110.675,0,-21.0124,-35.8742,-28.6495 dDocent_Contig_10038 49 . A T 157.476 . AB=0.133929;ABP=133.376;AC=2;AF=0.166667;AN=12;AO=21;CIGAR=1X;DP=358;DPB=358;DPRA=0.822857;EPP=48.6112;EPPR=732.625;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.47619;PAIREDR=0.458333;PAO=0;PQA=0;PQR=0;PRO=0;QA=781;QR=13087;RO=336;RPL=0;RPP=48.6112;RPPR=732.625;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=336;SRP=732.625;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:57:52,5:52:2038:5:199:-1.12873,0,-166.464 0/1:55:45,10:45:1742:10:372:-17.2608,0,-140.456 0/0:39:38,1:38:1497:1:40:0,-7.74449,-130.989 0/0:59:55,3:55:2106:3:93:0,-9.17087,-181.047 0/0:70:70,0:70:2696:0:0:0,-21.0721,-242.777 0/0:78:76,2:76:3008:2:77:0,-16.1715,-263.515 dDocent_Contig_10039 15 . T C 1080.82 . AB=0.421053;ABP=8.15326;AC=4;AF=0.333333;AN=12;AO=40;CIGAR=1X;DP=211;DPB=211;DPRA=0.409483;EPP=89.8692;EPPR=372.161;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994118;PAO=0;PQA=0;PQR=0;PRO=0;QA=1571;QR=6781;RO=170;RPL=0;RPP=89.8692;RPPR=372.161;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=170;SRP=372.161;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:7:2,5:2:82:5:204:-16.6368,0,-5.67247 0/1:32:10,22:10:396:22:867:-68.7061,0,-26.3603 0/1:9:8,1:8:324:1:36:-0.889005,0,-26.8201 0/1:47:35,12:35:1401:12:464:-27.9554,0,-112.193 0/0:57:56,0:56:2230:0:0:0,-16.8577,-200.672 0/0:59:59,0:59:2348:0:0:0,-17.7608,-211.478 dDocent_Contig_10040 28 . A C 132.767 . AB=0.149254;ABP=74.6041;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=194;DPB=194;DPRA=1.05512;EPP=24.725;EPPR=402.561;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.945652;PAO=0;PQA=0;PQR=0;PRO=0;QA=399;QR=7177;RO=184;RPL=0;RPP=24.725;RPPR=402.561;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=184;SRP=402.561;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:392:0:0:0,-3.0103,-35.6366 0/0:24:24,0:24:926:0:0:0,-7.22472,-83.6498 0/0:56:56,0:56:2172:0:0:0,-16.8577,-195.683 0/0:37:37,0:37:1428:0:0:0,-11.1381,-128.783 0/1:29:24,5:24:947:5:201:-9.74014,0,-76.8068 0/1:38:33,5:33:1312:5:198:-6.75845,0,-106.91 dDocent_Contig_10041 20 . C A 2251.53 . AB=0.393939;ABP=19.1318;AC=7;AF=0.583333;AN=12;AO=83;CIGAR=1X;DP=227;DPB=227;DPRA=0;EPP=183.243;EPPR=315.702;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3172;QR=5673;RO=144;RPL=0;RPP=183.243;RPPR=315.702;RPR=83;RUN=1;SAF=83;SAP=183.243;SAR=0;SRF=144;SRP=315.702;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:44:21,23:21:835:23:872:-65.5399,0,-62.2177 0/1:81:52,29:52:2071:29:1127:-77.3362,0,-162.19 0/0:46:44,2:44:1719:2:78:0,-6.44408,-147.518 0/1:40:27,13:27:1048:13:496:-32.9426,0,-82.5697 1/1:2:0,2:0:0:2:63:-5.98081,-0.60206,0 1/1:14:0,14:0:0:14:536:-48.5754,-4.21442,0 dDocent_Contig_10042 162 . G A 118.442 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=4;CIGAR=1X;DP=50;DPB=50;DPRA=0.434783;EPP=11.6962;EPPR=102.898;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=1783;RO=46;RPL=4;RPP=11.6962;RPPR=102.898;RPR=0;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=102.898;SRR=46;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:5:5,0:5:202:0:0:0,-1.50515,-18.5619 0/0:5:5,0:5:200:0:0:0,-1.50515,-18.3799 0/0:25:25,0:25:938:0:0:0,-7.52575,-84.7112 0/0:9:9,0:9:362:0:0:0,-2.70927,-32.9437 1/1:4:0,4:0:0:4:123:-11.3668,-1.20412,0 0/0:2:2,0:2:81:0:0:0,-0.60206,-7.68573 dDocent_Contig_10045 16 . A T 94.4731 . AB=0.125;ABP=100.727;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=243;DPB=243;DPRA=0.981595;EPP=24.725;EPPR=508.963;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.6;PAIREDR=0.682403;PAO=0;PQA=0;PQR=0;PRO=0;QA=400;QR=9297;RO=233;RPL=0;RPP=24.725;RPPR=508.963;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=233;SRP=508.963;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1394:0:0:0,-10.536,-125.717 0/1:47:41,6:41:1647:6:245:-8.28106,0,-134.307 0/0:31:31,0:31:1254:0:0:0,-9.33193,-113.128 0/1:33:29,4:29:1146:4:155:-4.3878,0,-93.4856 0/0:37:37,0:37:1457:0:0:0,-11.1381,-131.376 0/0:60:60,0:60:2399:0:0:0,-18.0618,-216.066 dDocent_Contig_10047 45 . A G 48.2441 . AB=0.176471;ABP=18.4661;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=98;DPB=98;DPRA=1.04938;EPP=9.52472;EPPR=209.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.873684;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=3788;RO=95;RPL=0;RPP=9.52472;RPPR=209.3;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=95;SRP=209.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:360:0:0:0,-2.70927,-32.7622 0/0:21:21,0:21:849:0:0:0,-6.32163,-76.7217 0/0:12:12,0:12:465:0:0:0,-3.61236,-42.1909 0/0:26:26,0:26:1041:0:0:0,-7.82678,-93.9837 0/0:13:13,0:13:515:0:0:0,-3.91339,-46.6946 0/1:17:14,3:14:558:3:123:-6.34728,0,-45.4437 dDocent_Contig_10048 45 . T G 41.5401 . AB=0.166667;ABP=20.3821;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=105;DPB=105;DPRA=1.03448;EPP=9.52472;EPPR=224.5;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.931373;PAO=0;PQA=0;PQR=0;PRO=0;QA=119;QR=4070;RO=102;RPL=0;RPP=9.52472;RPPR=224.5;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=102;SRP=224.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:987:0:0:0,-7.52575,-89.1307 0/0:11:11,0:11:444:0:0:0,-3.31133,-40.3158 0/0:19:19,0:19:764:0:0:0,-5.71957,-69.0791 0/1:18:15,3:15:598:3:119:-5.67685,0,-48.7414 0/0:14:14,0:14:543:0:0:0,-4.21442,-49.2061 0/0:18:18,0:18:734:0:0:0,-5.41854,-66.3832 dDocent_Contig_10050 53 . C A 2467.42 . AB=0.0927318;ABP=577.852;AC=0;AF=0;AN=12;AO=37;CIGAR=1X2M1X;DP=1085;DPB=1085;DPRA=3.31809;EPP=83.3548;EPPR=1957.34;GTI=0;LEN=1;MEANALT=6;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1438;QR=35552;RO=900;RPL=37;RPP=83.3548;RPPR=1957.34;RPR=0;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=900;SRP=1957.34;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:115:115,0,0:115:4528:0,0:0,0:0,-34.6184,-407.474,-34.6184,-407.474,-407.474 0|0:219:201,0,16:201:7926:0,16:0,635:0,-60.507,-712.603,-8.09981,-660.334,-655.518 0|0:53:48,0,4:48:1905:0,4:0,160:0,-14.4494,-171.258,-1.27761,-158.078,-156.874 0|0:94:92,0,0:92:3654:0,0:0,0:0,-27.6948,-328.499,-27.6948,-328.499,-328.499 0|0:399:268,37,90:268:10566:37,90:1438,3565:-212.724,-175.251,-1033.37,0,-751.114,-842.171 0|0:205:176,0,27:176:6973:0,27:0,1094:-37.2401,-90.2214,-664.116,0,-573.902,-565.775 dDocent_Contig_10051 8 . G T 6414.57 . AB=0.0336617;ABP=2303.73;AC=9;AF=0.75;AN=12;AO=41;CIGAR=4X4M1X2M1X2M1X4M;DP=1218;DPB=1221.05;DPRA=0;EPP=92.0407;EPPR=200.614;GTI=0;LEN=1;MEANALT=40.5;MQM=60;MQMR=60;NS=6;NUMALT=7;ODDS=0;PAIRED=1;PAIREDR=1;PAO=3.57143;PQA=131.286;PQR=439.286;PRO=11.5714;QA=1561;QR=3538;RO=91;RPL=0;RPP=92.0407;RPPR=200.614;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=91;SRP=200.614;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:139:8,12,17,26,11,8,7,7:8:303:12,17,26,11,8,7,7:468,653,972,417,308,257,265:-105.677,-72.9012,-94.1273,-54.4782,-44.1324,-74.1994,-28.769,-18.4235,0,-45.7809,-73.8949,-63.5491,-45.126,-19.4169,-95.4222,-82.796,-72.4501,-54.0271,-28.3179,-73.4438,-105.226,-87.0807,-76.7349,-58.3119,-32.6028,-77.7286,-86.6296,-109.812,-86.3599,-76.0141,-57.5911,-31.882,-77.0078,-85.9089,-90.1936,-109.091 0|1:213:14,21,20,19,11,16,18,12:14:537:21,20,19,11,16,18,12:826,760,711,423,575,666,457:-75.9896,-18.2543,-56.0076,-17.8747,0,-55.9292,-22.291,-4.41634,-4.03672,-60.6465,-45.4749,-27.6001,-27.2206,-31.6369,-86.2385,-33.3097,-15.4351,-15.0555,-19.4718,-42.6555,-72.5682,-25.7245,-7.84983,-7.47022,-11.8866,-35.0703,-22.9053,-64.381,-42.7163,-24.8415,-24.462,-28.8783,-52.0621,-39.897,-32.3118,-83.1789 1|0:313:28,25,41,24,30,22,32,4:28:1083:25,41,24,30,22,32,4:978,1550,903,1159,803,1221,156:-128.856,-63.8228,-145.25,-11.2193,-26.7101,-87.83,-63.7591,-79.2497,-26.6463,-145.487,-42.0942,-57.5849,-4.98134,-57.5212,-122.016,-71.691,-87.1816,-34.5783,-87.118,-65.4531,-154.021,-37.1128,-52.6035,0,-52.5398,-30.8749,-60.4717,-116.433,-124.461,-139.952,-87.3485,-139.888,-118.223,-147.82,-113.242,-212.21 0|1:214:11,24,46,17,20,8,12,5:11:438:24,46,17,20,8,12,5:935,1741,641,759,304,449,187:-173.227,-106.5,-135.344,-33.9687,0,-56.1905,-124.008,-90.0391,-17.5077,-154.96,-114.3,-80.331,-7.79956,-97.8392,-144.349,-151.607,-117.638,-45.1064,-135.146,-125.438,-185.268,-139.769,-105.8,-33.2687,-123.308,-113.6,-150.907,-172.226,-161.226,-127.256,-54.7254,-144.765,-135.057,-172.363,-160.526,-195.79 1|1:117:7,6,12,19,18,8,8,1:7:274:6,12,19,18,8,8,1:233,456,720,697,301,300,39:-91.6585,-76.2108,-96.9356,-56.3678,-61.3441,-75.2867,-34.7322,-39.7087,-19.8654,-51.5441,-36.5028,-41.4792,-21.6359,0,-53.6157,-69.1028,-74.079,-54.2361,-32.6006,-34.3711,-89.2257,-69.1927,-74.1689,-54.326,-32.6905,-34.461,-67.061,-89.3156,-90.5596,-95.5357,-75.6929,-54.0575,-55.8282,-88.4279,-88.5177,-112.79 1|1:222:23,24,13,27,25,7,19,12:23:903:24,13,27,25,7,19,12:935,486,992,947,258,695,457:-77.2701,-13.9065,-80.951,-44.6706,-48.6529,-115.026,-3.37172,-7.35429,-38.1181,-69.5133,-6.5523,-10.5348,-41.2988,0,-73.2961,-63.095,-67.0772,-97.8412,-56.5425,-59.7232,-135.257,-27.407,-31.3893,-62.1532,-20.8546,-24.0352,-80.5776,-95.9566,-46.7073,-50.6895,-81.4535,-40.1548,-43.3354,-99.8778,-64.1899,-117.364 dDocent_Contig_10053 8 . T G 23403.4 . AB=0.110451;ABP=2222.64;AC=4;AF=0.333333;AN=12;AO=186;CIGAR=3X;DP=1684;DPB=1684;DPRA=0;EPP=406.904;EPPR=639.252;GTI=0;LEN=1;MEANALT=9;MQM=26.5161;MQMR=57.3379;NS=6;NUMALT=3;ODDS=4.44089e-16;PAIRED=1;PAIREDR=0.979522;PAO=0;PQA=0;PQR=0;PRO=0;QA=7143;QR=11304;RO=293;RPL=0;RPP=406.904;RPPR=639.252;RPR=186;RUN=1;SAF=186;SAP=406.904;SAR=0;SRF=293;SRP=639.252;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:292:69,63,36,105:69:2659:63,36,105:2363,1368,4172:-322.707,-180.074,-377.658,-269.675,-322.824,-475.385,0,-53.1625,-142.769,-184.963 1|0:354:60,106,43,109:60:2317:106,43,109:4050,1635,4367:-455.976,-177.945,-327.875,-385.972,-271.724,-554.865,-114.257,0,-208.04,-263.293 1|0:155:23,46,28,47:23:876:46,28,47:1748,1082,1907:-197.516,-85.4454,-143.458,-146.644,-99.5214,-210.072,-47.1353,0,-61.2089,-104.857 1|0:341:53,96,33,136:53:2057:96,33,136:3659,1278,5434:-523.965,-286.577,-418.687,-470.53,-378.2,-621.605,-92.3342,0,-183.968,-212.418 0|0:224:52,47,17,92:52:2006:47,17,92:1777,652,3708:-290.015,-173.855,-311.852,-273.176,-293.508,-420.203,0,-20.3388,-119.673,-124.47 1|0:318:36,84,29,144:36:1389:84,29,144:3227,1128,5737:-561.382,-360.319,-442.802,-511.205,-407.079,-610.245,-104.135,0,-150.904,-168.571 dDocent_Contig_10056 88 . C A 1199.25 . AB=0.684211;ABP=14.2105;AC=3;AF=0.25;AN=12;AO=44;CIGAR=1X;DP=160;DPB=160;DPRA=1.46154;EPP=98.5551;EPPR=252.73;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1537;QR=3973;RO=115;RPL=44;RPP=98.5551;RPPR=252.73;RPR=0;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=115;SRP=252.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:39,2:39:1334:2:71:0,-5.60017,-113.618 0/0:12:12,0:12:416:0:0:0,-3.61236,-37.7726 0/0:27:27,0:27:919:0:0:0,-8.12781,-83.0154 0/0:26:25,0:25:874:0:0:0,-7.52575,-78.684 1/1:16:0,16:0:0:16:562:-50.9103,-4.81648,0 0/1:38:12,26:12:430:26:904:-70.2364,0,-27.601 dDocent_Contig_10057 7 . T C 2906.05 . AB=0.215569;ABP=472.412;AC=3;AF=0.25;AN=12;AO=146;CIGAR=1X;DP=847;DPB=847;DPRA=12.3333;EPP=320.045;EPPR=1525.21;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.998573;PAO=0;PQA=0;PQR=0;PRO=0;QA=5591;QR=26517;RO=701;RPL=0;RPP=320.045;RPPR=1525.21;RPR=146;RUN=1;SAF=146;SAP=320.045;SAR=0;SRF=701;SRP=1525.21;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:146:144,2:144:5404:2:78:0,-36.5469,-478.968 0/1:241:167,74:167:6303:74:2845:-183.676,0,-494.669 0/1:98:80,18:80:3042:18:683:-32.3008,0,-244.445 0/1:329:277,52:277:10524:52:1985:-79.8499,0,-847.765 0/0:28:28,0:28:1057:0:0:0,-8.42884,-95.4338 0/0:5:5,0:5:187:0:0:0,-1.50515,-17.192 dDocent_Contig_10058 28 . C A 865.221 . AB=0.717949;ABP=19.1015;AC=2;AF=0.166667;AN=12;AO=28;CIGAR=1X;DP=110;DPB=110;DPRA=1.09859;EPP=63.8115;EPPR=181.071;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.987805;PAO=0;PQA=0;PQR=0;PRO=0;QA=1120;QR=3192;RO=82;RPL=0;RPP=63.8115;RPPR=181.071;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=82;SRP=181.071;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:11:11,0:11:439:0:0:0,-3.31133,-39.8641 0/0:14:14,0:14:546:0:0:0,-4.21442,-49.4786 0/0:41:41,0:41:1576:0:0:0,-12.3422,-142.073 0/0:5:5,0:5:200:0:0:0,-1.50515,-18.379 0/1:22:8,14:8:313:14:568:-44.8395,0,-21.9117 0/1:17:3,14:3:118:14:552:-44.9044,0,-5.88538 dDocent_Contig_10059 70 . C T 79.8973 . AB=0;ABP=0;AC=2;AF=0.2;AN=10;AO=2;CIGAR=1X;DP=118;DPB=118;DPRA=0.0689655;EPP=7.35324;EPPR=254.901;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=80;QR=4623;RO=116;RPL=2;RPP=7.35324;RPPR=254.901;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=116;SRP=254.901;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:36,0:36:1427:0:0:0,-10.8371,-128.681 0/0:10:10,0:10:406:0:0:0,-3.0103,-36.9 0/0:32:32,0:32:1251:0:0:0,-9.63296,-112.85 0/0:38:38,0:38:1539:0:0:0,-11.4391,-138.747 1/1:2:0,2:0:0:2:80:-7.59157,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_10060 25 . C T 90.7476 . AB=0.206897;ABP=24.6501;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=223;DPB=223;DPRA=1.27941;EPP=26.8965;EPPR=463.362;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.966981;PAO=0;PQA=0;PQR=0;PRO=0;QA=375;QR=8420;RO=212;RPL=0;RPP=26.8965;RPPR=463.362;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=212;SRP=463.362;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:58:53,5:53:2084:5:164:0,-2.38024,-172.673 0/0:52:52,0:52:2076:0:0:0,-15.6536,-187.025 0/0:40:40,0:40:1573:0:0:0,-12.0412,-141.811 0/1:29:23,6:23:929:6:211:-10.5976,0,-75.184 0/0:20:20,0:20:800:0:0:0,-6.0206,-72.3177 0/0:24:24,0:24:958:0:0:0,-7.22472,-86.522 dDocent_Contig_10061 107 . N A 522.763 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=20;CIGAR=1X;DP=21;DPB=21;DPRA=0;EPP=46.4397;EPPR=0;GTI=0;LEN=1;MEANALT=1.2;MQM=55.25;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=569;QR=0;RO=0;RPL=0;RPP=46.4397;RPPR=0;RPR=20;RUN=1;SAF=0;SAP=46.4397;SAR=20;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:110:-9.53043,-1.20412,0 1/1:7:0,7:0:0:7:217:-19.7605,-2.10721,0 1/1:4:0,4:0:0:4:106:-9.80048,-1.20412,0 1/1:2:0,2:0:0:2:69:-6.55164,-0.60206,0 1/1:4:0,3:0:0:3:67:-5.93386,-0.90309,0 ./.:.:.:.:.:.:.:. dDocent_Contig_10062 19 . A G 123.304 . AB=0.416667;ABP=3.73412;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=219;DPB=219;DPRA=0.289855;EPP=13.8677;EPPR=467.705;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=190;QR=8540;RO=214;RPL=0;RPP=13.8677;RPPR=467.705;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=214;SRP=467.705;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:79:79,0:79:3111:0:0:0,-23.7814,-280.073 0/0:54:54,0:54:2193:0:0:0,-16.2556,-197.529 0/0:40:40,0:40:1591:0:0:0,-12.0412,-143.422 0/0:21:21,0:21:833:0:0:0,-6.32163,-75.2832 0/1:12:7,5:7:285:5:190:-13.8533,0,-22.412 0/0:13:13,0:13:527:0:0:0,-3.91339,-47.7769 dDocent_Contig_10063 11 . C A 6038.86 . AB=0.16369;ABP=333.1;AC=0;AF=0;AN=12;AO=56;CIGAR=1X1M2X;DP=740;DPB=691.25;DPRA=0.80381;EPP=124.613;EPPR=925.886;GTI=0;LEN=1;MEANALT=3.66667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2195;QR=16714;RO=425;RPL=0;RPP=124.613;RPPR=925.886;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=425;SRP=925.886;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:64:24,0,40,0:24:947:0,40,0:0,1574,0:-122.633,-129.857,-207.777,0,-78.3132,-66.272,-129.857,-207.777,-78.3132,-207.777 0|0:161:46,37,58,11:46:1815:37,58,11:1457,2306,421:-176.004,-69.9882,-208.191,0,-29.4786,-131.883,-155.304,-184.781,-114.795,-301.333 0|0:79:54,0,24,0:54:2120:0,24,0:0,966,0:-63.3603,-79.616,-253.969,0,-174.352,-167.127,-79.616,-253.969,-174.352,-253.969 0|0:175:43,18,81,33:43:1664:18,81,33:698,3186,1258:-249.11,-204.709,-335.962,0,-79.3271,-112.29,-158.861,-238.186,-33.4788,-285.597 0|0:175:174,0,0,0:174:6839:0,0,0:0,0,0:0,-52.3792,-614.882,-52.3792,-614.882,-614.882,-52.3792,-614.882,-614.882,-614.882 0|0:86:84,1,0,1:84:3329:1,0,1:40,0,39:0,-21.9865,-295.71,-25.2865,-296.011,-299.306,-22.0856,-292.805,-296.1,-295.799 dDocent_Contig_10065 140 . C T 72.3626 . AB=0.222222;ABP=21.1059;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=211;DPB=211;DPRA=0.733696;EPP=16.0391;EPPR=448.162;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=39.078;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.497561;PAO=0;PQA=0;PQR=0;PRO=0;QA=181;QR=7155;RO=205;RPL=0;RPP=16.0391;RPPR=448.162;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=448.162;SRR=205;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:27:21,6:21:733:6:181:-8.4581,0,-45.3326 0/0:30:30,0:30:1041:0:0:0,-9.0309,-73.1259 0/0:26:26,0:26:933:0:0:0,-7.82678,-65.1659 0/0:63:63,0:63:2226:0:0:0,-18.9649,-166.842 0/0:31:31,0:31:1063:0:0:0,-9.33193,-71.489 0/0:34:34,0:34:1159:0:0:0,-10.235,-65.7184 dDocent_Contig_10066 11 . A G 352.66 . AB=0.197802;ABP=75.1939;AC=2;AF=0.166667;AN=12;AO=24;CIGAR=1X;DP=257;DPB=257;DPRA=1.51333;EPP=55.1256;EPPR=508.963;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.25;PAIREDR=0.493562;PAO=0;PQA=0;PQR=0;PRO=0;QA=970;QR=9379;RO=233;RPL=0;RPP=55.1256;RPPR=508.963;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=233;SRP=508.963;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1207:0:0:0,-9.0309,-108.898 0/0:62:58,4:58:2354:4:164:0,-3.51396,-196.853 0/0:31:30,1:30:1205:1:41:0,-5.23736,-104.623 0/1:54:41,13:41:1654:13:527:-31.5211,0,-132.832 0/0:43:42,1:42:1672:1:41:0,-8.84972,-146.615 0/1:37:32,5:32:1287:5:197:-6.96668,0,-104.957 dDocent_Contig_10067 54 . T G 1045.02 . AB=0.216814;ABP=160.432;AC=4;AF=0.333333;AN=12;AO=53;CIGAR=1X;DP=321;DPB=321;DPRA=1.32857;EPP=118.098;EPPR=582.793;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.603774;PAIREDR=0.726592;PAO=0;PQA=0;PQR=0;PRO=0;QA=2132;QR=10706;RO=267;RPL=53;RPP=118.098;RPPR=582.793;RPR=0;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=267;SRP=582.793;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:26,11:26:1059:11:442:-28.9977,0,-84.4586 0/1:79:66,12:66:2670:12:484:-20.0863,0,-216.589 0/1:47:43,4:43:1714:4:161:-0.726488,0,-140.331 0/1:63:41,22:41:1655:22:881:-60.6361,0,-130.206 0/0:53:49,4:49:1929:4:164:0,-0.804691,-158.648 0/0:42:42,0:42:1679:0:0:0,-12.6433,-151.326 dDocent_Contig_10068 98 . N A 105.543 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=2X;DP=6;DPB=6;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=41.25;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0.25;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=119;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:3:0,2:0:0:2:75:-6.59148,-0.60206,0 1|1:3:0,2:0:0:2:44:-3.66065,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_10069 42 . T C 722.742 . AB=0.31;ABP=34.3664;AC=2;AF=0.166667;AN=12;AO=40;CIGAR=1X;DP=382;DPB=382;DPRA=0.884058;EPP=8.43898;EPPR=25.8679;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.4;PAIREDR=0.538012;PAO=0;PQA=0;PQR=0;PRO=0;QA=1523;QR=12906;RO=342;RPL=0;RPP=89.8692;RPPR=745.654;RPR=40;RUN=1;SAF=25;SAP=8.43898;SAR=15;SRF=201;SRP=25.8679;SRR=141;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:85:80,5:80:3019:5:199:0,-7.3008,-253.569 0/1:62:44,18:44:1667:18:688:-43.5798,0,-131.611 0/1:38:25,13:25:955:13:478:-31.9162,0,-74.8109 0/0:59:55,4:55:2077:4:158:0,-3.16211,-172.552 0/0:79:79,0:79:2965:0:0:0,-23.7814,-266.997 0/0:59:59,0:59:2223:0:0:0,-17.7608,-200.273 dDocent_Contig_10070 99 . G A 1163.5 . AB=0.364964;ABP=24.7092;AC=5;AF=0.416667;AN=12;AO=52;CIGAR=1X;DP=159;DPB=159;DPRA=0;EPP=76.6733;EPPR=233.186;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.711538;PAIREDR=0.698113;PAO=0;PQA=0;PQR=0;PRO=0;QA=1901;QR=3828;RO=106;RPL=5;RPP=76.6733;RPPR=233.186;RPR=47;RUN=1;SAF=0;SAP=115.927;SAR=52;SRF=0;SRP=233.186;SRR=106;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:12,8:12:440:8:301:-21.425,0,-33.9239 0/0:22:20,2:20:734:2:69:0,-0.0701205,-59.8372 0/1:30:23,7:23:832:7:253:-14.0881,0,-66.1711 0/1:41:30,11:30:1067:11:416:-25.4482,0,-83.9905 0/1:22:9,12:9:320:12:426:-32.2523,0,-22.7115 0/1:24:12,12:12:435:12:436:-32.3576,0,-32.2669 dDocent_Contig_10074 37 . A G 713.609 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=140;DPB=140;DPRA=0.833333;EPP=46.4397;EPPR=263.587;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=784;QR=4647;RO=120;RPL=0;RPP=46.4397;RPPR=263.587;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=120;SRP=263.587;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:39,0:39:1461:0:0:0,-11.7402,-131.733 0/0:28:28,0:28:1084:0:0:0,-8.42884,-97.8519 0/0:25:25,0:25:991:0:0:0,-7.52575,-89.4909 0/0:26:26,0:26:1029:0:0:0,-7.82678,-92.9105 1/1:20:0,20:0:0:20:784:-70.8836,-6.0206,0 0/0:2:2,0:2:82:0:0:0,-0.60206,-7.77968 dDocent_Contig_10075 170 . G A 122.518 . AB=0.212121;ABP=26.7649;AC=3;AF=0.25;AN=12;AO=7;CIGAR=1X;DP=81;DPB=81;DPRA=0.6875;EPP=18.2106;EPPR=161.528;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.714286;PAIREDR=0.808219;PAO=0;PQA=0;PQR=0;PRO=0;QA=277;QR=2887;RO=73;RPL=7;RPP=18.2106;RPPR=161.528;RPR=0;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=161.528;SRR=73;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:9:5,3:5:170:3:118:-8.19656,0,-12.8242 0/0:9:9,0:9:360:0:0:0,-2.70927,-32.7632 0/1:13:10,3:10:400:3:120:-7.2743,0,-32.4442 0/1:11:10,1:10:388:1:39:-0.585235,0,-31.9601 0/0:10:10,0:10:398:0:0:0,-3.0103,-36.1779 0/0:29:29,0:29:1171:0:0:0,-8.72987,-105.667 dDocent_Contig_10076 40 . A T 433.253 . AB=0.0948276;ABP=168.417;AC=0;AF=0;AN=12;AO=14;CIGAR=8M1X2M;DP=243;DPB=241.909;DPRA=1.22059;EPP=33.4109;EPPR=428.619;GTI=0;LEN=1;MEANALT=2.75;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0.989796;PAO=0;PQA=0;PQR=0;PRO=0;QA=444;QR=7409;RO=196;RPL=0;RPP=33.4109;RPPR=428.619;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=196;SRP=428.619;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:29:22,0,3,4:22:823:0,3,4:0,104,155:-6.13197,-12.7546,-80.1493,-4.31941,-71.6997,-70.7966,0,-67.4156,-58.9662,-66.2114 0|0:43:28,0,3,10:28:1054:0,3,10:0,105,381:-22.8665,-31.2953,-117.666,-22.754,-109.125,-108.222,0,-86.416,-77.8747,-83.4057 0|0:44:31,0,5,8:31:1165:0,5,8:0,133,312:-16.3881,-25.72,-121.18,-15.3059,-110.731,-109.226,0,-95.531,-85.0846,-93.1228 0|0:34:32,0,0,0:32:1231:0,0,0:0,0,0:0,-9.63296,-110.837,-9.63296,-110.837,-110.837,-9.63296,-110.837,-110.837,-110.837 0|0:43:38,5,0,0:38:1432:5,0,0:197,0,0:-5.1605,0,-116.211,-16.5996,-117.716,-133.924,-16.5996,-117.716,-133.924,-133.924 0|0:50:45,1,3,0:45:1704:1,3,0:36,102,0:0,-10.6054,-150.025,-5.282,-142.055,-144.089,-13.5463,-150.326,-144.992,-153.263 dDocent_Contig_10077 19 . G C 8599.18 . AB=0.420228;ABP=41.8122;AC=6;AF=0.5;AN=12;AO=295;CIGAR=5M1I2M1X;DP=702;DPB=745.875;DPRA=0;EPP=643.595;EPPR=756.511;GTI=0;LEN=1;MEANALT=3.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11649;QR=13681;RO=347;RPL=0;RPP=643.595;RPPR=756.511;RPR=295;RUN=1;SAF=295;SAP=643.595;SAR=0;SRF=347;SRP=756.511;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:66:19,0,45:19:743:0,45:0,1770:-139.855,-145.574,-206.657,0,-61.0707,-47.5244 0|1:120:33,8,78:33:1299:8,78:305,3076:-243.135,-228.055,-332.507,0,-81.8586,-83.3913 0|1:119:49,0,70:49:1919:0,70:0,2773:-213.874,-228.624,-386.412,0,-158.181,-137.108 0|1:125:51,17,53:51:2012:17,53:671,2089:-156.508,-116.648,-277.077,0,-110.337,-149.595 0|1:127:86,23,17:86:3407:23,17:881,675:-46.4019,0,-273.503,-16.7168,-224.86,-292.035 0|1:145:109,3,32:109:4301:3,32:120,1266:-71.3663,-94.293,-447.274,0,-343.992,-344.245 dDocent_Contig_10079 9 . T C 575.794 . AB=0.294118;ABP=34.305;AC=3;AF=0.25;AN=12;AO=30;CIGAR=1X;DP=178;DPB=178;DPRA=0;EPP=68.1545;EPPR=324.388;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.533333;PAIREDR=0.540541;PAO=0;PQA=0;PQR=0;PRO=0;QA=1154;QR=5687;RO=148;RPL=0;RPP=68.1545;RPPR=324.388;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=148;SRP=324.388;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:14,9:14:539:9:349:-24.8472,0,-41.9313 0/0:42:39,3:39:1495:3:108:0,-2.57008,-124.752 0/1:38:30,8:30:1163:8:311:-16.9152,0,-93.5292 0/0:21:20,1:20:764:1:39:0,-2.42507,-65.1896 0/1:24:16,8:16:608:8:310:-21.0389,0,-47.8296 0/0:30:29,1:29:1118:1:37:0,-5.33307,-97.2237 dDocent_Contig_10080 42 . A C 526.496 . AB=0.236364;ABP=69.4179;AC=3;AF=0.25;AN=12;AO=26;CIGAR=1X;DP=437;DPB=437;DPRA=0.336391;EPP=59.4686;EPPR=886.821;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=999;QR=15730;RO=411;RPL=0;RPP=59.4686;RPPR=886.821;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=411;SRP=895.485;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:17,3:17:663:3:117:-4.88923,0,-53.9853 0/1:46:28,18:28:1066:18:691:-48.6698,0,-82.3915 0/1:44:39,5:39:1477:5:191:-4.31194,0,-119.955 0/0:64:64,0:64:2459:0:0:0,-19.2659,-221.503 0/0:150:150,0:150:5770:0:0:0,-45.1545,-519.221 0/0:113:113,0:113:4295:0:0:0,-34.0164,-386.597 dDocent_Contig_10081 142 . C G 617.839 . AB=0.652174;ABP=12.2627;AC=6;AF=0.5;AN=12;AO=63;CIGAR=1X;DP=113;DPB=113;DPRA=0;EPP=139.813;EPPR=111.584;GTI=0;LEN=1;MEANALT=1;MQM=15.3175;MQMR=56.12;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.92;PAO=0;PQA=0;PQR=0;PRO=0;QA=2319;QR=1825;RO=50;RPL=0;RPP=139.813;RPPR=111.584;RPR=63;RUN=1;SAF=0;SAP=139.813;SAR=63;SRF=0;SRP=111.584;SRR=50;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:8,14:8:288:14:500:-14.9668,0,-19.6437 0/0:22:16,6:16:591:6:196:0,-3.05606,-49.9617 0/0:19:18,1:18:663:1:35:0,-5.02012,-48.8091 0/1:24:8,16:8:283:16:571:-29.7007,0,-18.5857 1/1:20:0,20:0:0:20:793:-14.4735,-6.0206,0 1/1:6:0,6:0:0:6:224:-5.86477,-1.80618,0 dDocent_Contig_10082 12 . G A 2165.44 . AB=0.348739;ABP=50.3083;AC=5;AF=0.416667;AN=12;AO=86;CIGAR=1X;DP=292;DPB=292;DPRA=0;EPP=189.757;EPPR=416.265;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=58.0534;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.660194;PAO=0;PQA=0;PQR=0;PRO=0;QA=3403;QR=8069;RO=206;RPL=0;RPP=189.757;RPPR=450.334;RPR=86;RUN=1;SAF=86;SAP=189.757;SAR=0;SRF=202;SRP=416.265;SRR=4;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:45:30,15:30:1199:15:596:-40.4341,0,-94.3786 0/1:50:24,26:24:911:26:1035:-78.3955,0,-67.1557 0/1:32:21,11:21:836:11:431:-29.5099,0,-65.8445 0/1:57:33,24:33:1263:24:940:-67.7479,0,-96.7564 0/0:54:51,3:51:1989:3:117:0,-5.34524,-167.627 0/1:54:47,7:47:1871:7:284:-9.67837,0,-152.031 dDocent_Contig_10083 117 . T C 200.433 . AB=0.270833;ABP=24.906;AC=3;AF=0.375;AN=8;AO=15;CIGAR=1X;DP=69;DPB=69;DPRA=0;EPP=35.5824;EPPR=120.27;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=496;QR=1743;RO=54;RPL=0;RPP=35.5824;RPPR=120.27;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=0;SRP=120.27;SRR=54;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:15:9,6:9:302:6:200:-13.8126,0,-22.9908 0/1:22:19,3:19:611:3:99:-2.6148,0,-48.6715 0/1:11:7,4:7:229:4:133:-8.98764,0,-17.6183 0/0:21:19,2:19:601:2:64:0,-0.24297,-48.311 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10084 141 . T A 11696.2 . AB=0.589435;ABP=77.9734;AC=5;AF=0.416667;AN=12;AO=636;CIGAR=1X;DP=1134;DPB=1134;DPRA=3.92364;EPP=1384.07;EPPR=1082.23;GTI=0;LEN=1;MEANALT=1.2;MQM=30.3726;MQMR=59.837;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998428;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=24428;QR=18764;RO=497;RPL=0;RPP=1384.07;RPPR=1082.23;RPR=636;RUN=1;SAF=0;SAP=1384.07;SAR=636;SRF=0;SRP=1082.23;SRR=497;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:266:64,202:64:2385:202:7855:-391.902,0,-134.786 0/1:333:110,223:110:4131:223:8442:-454.958,0,-271.632 0/1:155:72,82:72:2725:82:3207:-140.35,0,-198.991 0/1:191:102,89:102:3870:89:3350:-172.157,0,-290.904 0/0:55:55,0:55:2081:0:0:0,-16.5566,-187.523 0/1:134:94,40:94:3572:40:1574:-19.4723,0,-280.316 dDocent_Contig_10085 81 . G T 1948.11 . AB=0.410377;ABP=17.8009;AC=4;AF=0.333333;AN=12;AO=91;CIGAR=1X;DP=645;DPB=645;DPRA=0.464948;EPP=200.614;EPPR=1206.01;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3074;QR=18838;RO=554;RPL=91;RPP=200.614;RPPR=1206.01;RPR=0;RUN=1;SAF=91;SAP=200.614;SAR=0;SRF=554;SRP=1206.01;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:52:24,28:24:812:28:955:-70.6061,0,-57.7402 0/1:71:61,10:61:2064:10:323:-8.00956,0,-164.661 0/1:33:21,12:21:730:12:416:-27.8387,0,-56.0888 0/1:56:19,37:19:647:37:1246:-95.5789,0,-41.6928 0/0:194:194,0:194:6566:0:0:0,-58.3998,-591.07 0/0:239:235,4:235:8019:4:134:0,-59.555,-709.401 dDocent_Contig_10087 47 . A T 220.906 . AB=0.0740741;ABP=45.5551;AC=0;AF=0;AN=12;AO=2;CIGAR=2M1X;DP=234;DPB=227.333;DPRA=0.639053;EPP=7.35324;EPPR=37.4671;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.754717;PAO=0;PQA=0;PQR=0;PRO=0;QA=73;QR=7672;RO=212;RPL=1;RPP=3.0103;RPPR=245.928;RPR=1;RUN=1;SAF=1;SAP=3.0103;SAR=1;SRF=106;SRP=3.0103;SRR=106;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:45:44,1,0:44:1605:1,0:36,0:0,-9.94807,-141.129,-13.2453,-141.43,-144.368 0|0:40:37,3,0:37:1343:3,0:100,0:0,-2.71361,-111.835,-11.1381,-112.738,-120.827 0|0:52:51,1,0:51:1854:1,0:41,0:0,-11.559,-163.023,-15.3525,-163.324,-166.709 0|0:27:22,3,2:22:796:3,2:117,73:-3.00942,0,-64.0657,-3.67758,-59.0041,-68.0225 0|0:32:30,2,0:30:1068:2,0:80,0:0,-2.04117,-88.828,-9.0309,-89.4301,-96.023 0|0:38:28,10,0:28:1006:10,0:371,0:-22.296,0,-79.4074,-30.7249,-82.4177,-112.775 dDocent_Contig_10088 140 . G C 509.479 . AB=0.5;ABP=3.0103;AC=3;AF=0.25;AN=12;AO=17;CIGAR=1X;DP=78;DPB=78;DPRA=0.644068;EPP=39.9253;EPPR=133.299;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=584;QR=2264;RO=60;RPL=0;RPP=39.9253;RPPR=133.299;RPR=17;RUN=1;SAF=0;SAP=39.9253;SAR=17;SRF=0;SRP=133.299;SRR=60;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:274:0:0:0,-2.10721,-25.0274 0/0:22:22,0:22:834:0:0:0,-6.62266,-75.3713 0/0:15:15,0:15:564:0:0:0,-4.51545,-51.0937 0/0:15:15,0:15:552:0:0:0,-4.51545,-50.0091 1/1:15:0,15:0:0:15:510:-46.2139,-4.51545,0 0/1:4:1,2:1:40:2:74:-5.94576,0,-2.85281 dDocent_Contig_10090 92 . C T 980.567 . AB=0.857143;ABP=41.7866;AC=3;AF=0.25;AN=12;AO=35;CIGAR=1X;DP=225;DPB=225;DPRA=0.490066;EPP=79.0118;EPPR=413.419;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1250;QR=6496;RO=189;RPL=35;RPP=79.0118;RPPR=413.419;RPR=0;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=189;SRP=413.419;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:34,1:34:1182:1:37:0,-6.83822,-102.99 0/0:109:108,0:108:3688:0:0:0,-32.5112,-331.789 0/0:9:9,0:9:307:0:0:0,-2.70927,-27.9613 0/0:33:33,0:33:1145:0:0:0,-9.93399,-103.359 0/1:35:5,30:5:174:30:1078:-86.7964,0,-5.4659 1/1:4:0,4:0:0:4:135:-12.4821,-1.20412,0 dDocent_Contig_10091 25 . T A 1719.1 . AB=0.184685;ABP=386.441;AC=7;AF=0.583333;AN=12;AO=98;CIGAR=2X;DP=549;DPB=549;DPRA=0;EPP=215.815;EPPR=978.001;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.989796;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3736;QR=15883;RO=449;RPL=0;RPP=215.815;RPPR=978.001;RPR=98;RUN=1;SAF=98;SAP=215.815;SAR=0;SRF=449;SRP=978.001;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:97:89,8:89:3136:8:302:0,-1.66721,-254.913 0|1:133:114,18:114:4015:18:648:-18.4978,0,-321.387 0|1:123:84,38:84:2995:38:1461:-94.9145,0,-232.921 0|1:188:162,26:162:5737:26:1010:-34.6076,0,-459.821 1|1:5:0,5:0:0:5:193:-17.7397,-1.50515,0 1|1:3:0,3:0:0:3:122:-11.3725,-0.90309,0 dDocent_Contig_10093 23 . C A 37.6334 . AB=0.119048;ABP=55.9529;AC=1;AF=0.125;AN=8;AO=5;CIGAR=1X;DP=149;DPB=149;DPRA=1.17757;EPP=13.8677;EPPR=315.702;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=197;QR=5729;RO=144;RPL=0;RPP=13.8677;RPPR=315.702;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=144;SRP=315.702;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:8:8,0:8:319:0:0:0,-2.40824,-29.0764 0/0:40:40,0:40:1604:0:0:0,-12.0412,-144.593 0/1:42:37,5:37:1473:5:197:-5.46223,0,-120.169 0/0:59:59,0:59:2333:0:0:0,-17.7608,-210.119 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10094 109 . G A 552.782 . AB=0.519231;ABP=3.17734;AC=2;AF=0.25;AN=8;AO=27;CIGAR=1X;DP=102;DPB=102;DPRA=1.04;EPP=61.6401;EPPR=163.699;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=817;QR=2508;RO=74;RPL=0;RPP=61.6401;RPPR=163.699;RPR=27;RUN=1;SAF=0;SAP=61.6401;SAR=27;SRF=0;SRP=163.699;SRR=74;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:29:15,13:15:512:13:415:-29.1424,0,-37.8889 0/0:26:26,0:26:875:0:0:0,-7.82678,-79.0603 0/1:23:9,14:9:299:14:402:-29.5337,0,-20.3091 0/0:24:24,0:24:822:0:0:0,-7.22472,-74.296 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10095 10 . G A 456.212 . AB=0.219048;ABP=74.9998;AC=3;AF=0.25;AN=12;AO=26;CIGAR=1X;DP=200;DPB=200;DPRA=1.01212;EPP=59.4686;EPPR=380.846;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.867816;PAO=0;PQA=0;PQR=0;PRO=0;QA=1026;QR=6959;RO=174;RPL=0;RPP=59.4686;RPPR=380.846;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=174;SRP=380.846;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1313:0:0:0,-9.93399,-118.429 0/1:43:30,13:30:1214:13:525:-34.6529,0,-96.5865 0/1:36:29,7:29:1173:7:270:-13.8217,0,-95.0055 0/0:32:30,2:30:1210:2:82:0,-1.85328,-101.392 0/1:26:23,3:23:923:3:109:-2.33621,0,-75.5481 0/0:30:29,1:29:1126:1:40:0,-5.03522,-97.609 dDocent_Contig_10096 24 . T A 385.627 . AB=0.340426;ABP=13.4056;AC=2;AF=0.2;AN=10;AO=16;CIGAR=1X;DP=110;DPB=110;DPRA=1.11905;EPP=37.7539;EPPR=207.129;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=614;QR=3670;RO=94;RPL=0;RPP=37.7539;RPPR=207.129;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=94;SRP=207.129;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:8:2,6:2:50:6:237:-19.2938,0,-2.3366 0/0:17:17,0:17:670:0:0:0,-5.11751,-60.6329 0/0:16:16,0:16:619:0:0:0,-4.81648,-56.0389 0/1:39:29,10:29:1139:10:377:-22.5316,0,-91.0598 ./.:.:.:.:.:.:.:. 0/0:30:30,0:30:1192:0:0:0,-9.0309,-107.563 dDocent_Contig_10097 148 . G A 829.833 . AB=0.211538;ABP=190.926;AC=6;AF=0.5;AN=12;AO=55;CIGAR=1X;DP=260;DPB=260;DPRA=0;EPP=122.441;EPPR=445.991;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1892;QR=7049;RO=204;RPL=0;RPP=122.441;RPPR=445.991;RPR=55;RUN=1;SAF=0;SAP=122.441;SAR=55;SRF=0;SRP=445.991;SRR=204;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:18:15,3:15:519:3:101:-4.00506,0,-41.6192 0/1:37:22,15:22:764:15:504:-34.54,0,-57.9411 0/1:29:18,11:18:637:11:392:-26.8904,0,-48.9282 0/1:38:32,6:32:1098:6:209:-7.71173,0,-87.6879 0/1:98:84,13:84:2882:13:450:-11.5284,0,-230.321 0/1:40:33,7:33:1149:7:236:-9.52883,0,-91.6726 dDocent_Contig_10098 57 . G C 2000.51 . AB=0.413408;ABP=14.6683;AC=6;AF=0.5;AN=12;AO=74;CIGAR=1X;DP=179;DPB=179;DPRA=0;EPP=163.699;EPPR=231.015;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.743243;PAIREDR=0.857143;PAO=0;PQA=0;PQR=0;PRO=0;QA=2916;QR=4164;RO=105;RPL=74;RPP=163.699;RPPR=231.015;RPR=0;RUN=1;SAF=74;SAP=163.699;SAR=0;SRF=105;SRP=231.015;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:9:8,1:8:317:1:41:-1.3853,0,-26.1845 0/1:33:28,5:28:1125:5:190:-7.52781,0,-91.6021 0/1:20:17,3:17:647:3:122:-5.35189,0,-52.526 0/1:26:19,7:19:766:7:274:-17.1988,0,-61.4338 0/1:37:14,23:14:549:23:903:-70.4359,0,-38.6146 0/1:54:19,35:19:760:35:1386:-108.741,0,-52.4661 dDocent_Contig_10099 41 . T C 1802.93 . AB=0.299145;ABP=44.0084;AC=2;AF=0.166667;AN=12;AO=35;CIGAR=1M4I2M1X;DP=149;DPB=227;DPRA=0;EPP=79.0118;EPPR=107.241;GTI=0;LEN=1;MEANALT=3;MQM=57.8286;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1384;QR=1914;RO=48;RPL=0;RPP=79.0118;RPPR=107.241;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=48;SRP=107.241;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:34:8,13,12,0:8:319:13,12,0:519,457,0:-51.2394,-10.8823,-33.2547,-16.4847,0,-39.1498,-53.6476,-37.1681,-42.7622,-79.9234 1|0:37:7,16,11,3:7:277:16,11,3:633,418,122:-58.201,-11.4654,-29.4477,-26.0335,0,-45.5223,-50.2419,-24.1981,-38.7673,-72.1384 0|0:25:9,5,5,6:9:361:5,5,6:192,194,242:-17.2451,-4.19954,-32.441,-4.01722,-18.0105,-32.2595,0,-13.9962,-13.8143,-27.9455 0|0:21:3,1,12,5:3:119:1,12,5:40,467,204:-44.5059,-42.1136,-51.6089,-7.04443,-13.5425,-13.2248,-28.5726,-35.0742,0,-36.8647 0|0:5:3,0,0,2:3:122:0,0,2:0,0,82:-6.27453,-7.17762,-17.2389,-7.17762,-17.2389,-17.2389,0,-10.4694,-10.4694,-9.86734 0|0:27:18,0,3,6:18:716:0,3,6:0,98,236:-14.0488,-19.4674,-78.4429,-12.1245,-71.0812,-70.1781,0,-59.0312,-51.6725,-57.225 dDocent_Contig_10100 107 . N G 2728.18 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=87;CIGAR=1X;DP=87;DPB=87;DPRA=0;EPP=191.928;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.896552;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3000;QR=0;RO=0;RPL=0;RPP=191.928;RPPR=0;RPR=87;RUN=1;SAF=0;SAP=191.928;SAR=87;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:18:0,18:0:0:18:618:-55.9434,-5.41854,0 1/1:23:0,23:0:0:23:792:-71.5987,-6.92369,0 1/1:16:0,16:0:0:16:548:-49.6445,-4.81648,0 1/1:9:0,9:0:0:9:312:-28.416,-2.70927,0 1/1:12:0,12:0:0:12:418:-37.9539,-3.61236,0 1/1:9:0,9:0:0:9:312:-28.4162,-2.70927,0 dDocent_Contig_10101 22 . G A 114.195 . AB=0.142857;ABP=65.0524;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=205;DPB=205;DPRA=1.87919;EPP=20.3821;EPPR=430.79;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=327;QR=7847;RO=197;RPL=0;RPP=20.3821;RPPR=430.79;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=197;SRP=430.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:658:0:0:0,-5.11751,-59.5466 0/0:28:28,0:28:1124:0:0:0,-8.42884,-101.445 0/1:56:48,8:48:1933:8:327:-12.9424,0,-157.306 0/0:40:40,0:40:1608:0:0:0,-12.0412,-144.955 0/0:28:28,0:28:1111:0:0:0,-8.42884,-100.276 0/0:36:36,0:36:1413:0:0:0,-10.8371,-127.421 dDocent_Contig_10102 17 . C A 113.99 . AB=0.152542;ABP=64.8789;AC=3;AF=0.25;AN=12;AO=9;CIGAR=1X;DP=152;DPB=152;DPRA=0.634409;EPP=22.5536;EPPR=313.531;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=364;QR=5726;RO=143;RPL=0;RPP=22.5536;RPPR=313.531;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=143;SRP=313.531;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:8:7,1:7:276:1:40:-1.58744,0,-22.8002 0/0:18:18,0:18:718:0:0:0,-5.41854,-64.9473 0/1:10:6,4:6:236:4:161:-11.8646,0,-18.5992 0/1:41:37,4:37:1481:4:163:-2.7162,0,-121.195 0/0:28:28,0:28:1114:0:0:0,-8.42884,-100.539 0/0:47:47,0:47:1901:0:0:0,-14.1484,-171.285 dDocent_Contig_10103 8 . T C 1292.2 . AB=0.185464;ABP=345.88;AC=6;AF=0.5;AN=12;AO=74;CIGAR=1X1M;DP=399;DPB=399;DPRA=0;EPP=163.699;EPPR=697.881;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=59.8875;NS=6;NUMALT=2;ODDS=0;PAIRED=0.945946;PAIREDR=0.734375;PAO=0;PQA=0;PQR=0;PRO=0;QA=2854;QR=12226;RO=320;RPL=0;RPP=163.699;RPPR=697.881;RPR=74;RUN=1;SAF=74;SAP=163.699;SAR=0;SRF=320;SRP=697.881;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:44:40,0,4:40:1547:0,4:0,156:-1.17197,-13.2132,-140.283,0,-127.46,-126.256 0|1:65:55,0,10:55:2111:0,10:0,384:-15.3481,-31.9048,-205.186,0,-173.665,-170.655 0|1:80:68,0,11:68:2599:0,11:0,423:-14.2706,-34.7406,-247.982,0,-213.254,-209.943 0|1:61:54,0,7:54:2052:0,7:0,271:-6.39348,-22.6491,-190.881,0,-168.618,-166.511 0|1:81:59,0,22:59:2229:0,22:0,848:-52.259,-70.0197,-252.712,0,-183.075,-176.453 0|1:68:44,4,20:44:1688:4,20:153,772:-50.1598,-50.8504,-188.191,0,-125.992,-132.526 dDocent_Contig_10104 14 . A T 440.94 . AB=0.164474;ABP=151.642;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=1X;DP=752;DPB=752;DPRA=1.26667;EPP=57.2971;EPPR=1570.83;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.977961;PAO=0;PQA=0;PQR=0;PRO=0;QA=1012;QR=28816;RO=726;RPL=0;RPP=57.2971;RPPR=1579.5;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=725;SRP=1570.83;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:127:127,0:127:5047:0:0:0,-38.2308,-454.128 0/1:152:127,25:127:5047:25:1012:-45.6169,0,-408.361 0/0:81:81,0:81:3185:0:0:0,-24.3834,-286.741 0/0:139:138,0:138:5440:0:0:0,-41.5421,-489.131 0/0:151:151,0:151:6018:0:0:0,-45.4555,-541.401 0/0:102:102,0:102:4079:0:0:0,-30.7051,-367.086 dDocent_Contig_10105 16 . A G 88.889 . AB=0.119048;ABP=108.895;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=192;DPB=192;DPRA=1.55556;EPP=24.725;EPPR=398.218;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9725;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.813187;PAO=0;PQA=0;PQR=0;PRO=0;QA=407;QR=7302;RO=182;RPL=0;RPP=24.725;RPPR=398.218;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=182;SRP=398.218;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:26,4:26:1045:4:163:-6.02753,0,-85.3112 0/1:54:48,6:48:1906:6:244:-6.08321,0,-155.47 0/0:43:43,0:43:1732:0:0:0,-12.9443,-156.095 0/0:31:31,0:31:1246:0:0:0,-9.33193,-112.409 0/0:20:20,0:20:812:0:0:0,-6.0206,-73.3951 0/0:14:14,0:14:561:0:0:0,-4.21442,-50.8335 dDocent_Contig_10106 107 . N A 292.26 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=0.777778;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=308;QR=0;RO=0;RPL=0;RPP=22.5536;RPPR=0;RPR=9;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:166:-15.2671,-1.50515,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:3:0,3:0:0:3:107:-9.98217,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10107 26 . G A 2704.26 . AB=0.51087;ABP=3.19912;AC=4;AF=0.333333;AN=12;AO=94;CIGAR=1X;DP=212;DPB=212;DPRA=3.28571;EPP=207.129;EPPR=225.678;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.90678;PAO=0;PQA=0;PQR=0;PRO=0;QA=3687;QR=4638;RO=118;RPL=0;RPP=207.129;RPPR=259.244;RPR=94;RUN=1;SAF=94;SAP=207.129;SAR=0;SRF=114;SRP=225.678;SRR=4;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:56:18,38:18:704:38:1477:-116.318,0,-46.8291 0/1:62:36,26:36:1448:26:1030:-74.328,0,-111.906 0/1:32:13,19:13:507:19:736:-56.9218,0,-36.3364 0/1:34:23,11:23:873:11:444:-30.0801,0,-68.6336 0/0:10:10,0:10:399:0:0:0,-3.0103,-36.2697 0/0:18:18,0:18:707:0:0:0,-5.41854,-63.9547 dDocent_Contig_10108 19 . A C 148.002 . AB=0.166667;ABP=55.1256;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=427;DPB=427;DPRA=0.940909;EPP=26.8965;EPPR=906.343;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.909091;PAIREDR=0.860577;PAO=0;PQA=0;PQR=0;PRO=0;QA=440;QR=16376;RO=416;RPL=0;RPP=26.8965;RPPR=906.343;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=416;SRP=906.343;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:68:68,0:68:2691:0:0:0,-20.47,-242.318 0/0:76:75,1:75:2917:1:41:0,-18.7837,-258.546 0/0:68:68,0:68:2705:0:0:0,-20.47,-243.571 0/0:84:84,0:84:3289:0:0:0,-25.2865,-296.079 0/1:54:45,9:45:1800:9:358:-16.3231,0,-145.956 0/0:77:76,1:76:2974:1:41:0,-19.0847,-263.669 dDocent_Contig_10109 13 . G A 171.228 . AB=0.2;ABP=46.0055;AC=4;AF=0.333333;AN=12;AO=11;CIGAR=1X;DP=69;DPB=69;DPRA=1.96429;EPP=26.8965;EPPR=128.956;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=436;QR=2336;RO=58;RPL=0;RPP=26.8965;RPPR=128.956;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=58;SRP=128.956;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:10:8,2:8:326:2:79:-4.48733,0,-26.6996 0/1:4:3,1:3:123:1:41:-2.89045,0,-10.2607 0/1:22:16,6:16:646:6:235:-14.8964,0,-51.8501 0/1:19:17,2:17:670:2:81:-1.96616,0,-54.9084 0/0:7:7,0:7:287:0:0:0,-2.10721,-26.2052 0/0:7:7,0:7:284:0:0:0,-2.10721,-25.9334 dDocent_Contig_10111 20 . T C 2493.03 . AB=0.272021;ABP=177.268;AC=6;AF=0.5;AN=12;AO=105;CIGAR=1X;DP=386;DPB=386;DPRA=0;EPP=231.015;EPPR=553.907;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.87619;PAIREDR=0.800712;PAO=0;PQA=0;PQR=0;PRO=0;QA=4164;QR=11101;RO=281;RPL=0;RPP=231.015;RPPR=613.194;RPR=105;RUN=1;SAF=105;SAP=231.015;SAR=0;SRF=274;SRP=553.907;SRR=7;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:39:21,18:21:840:18:723:-53.6536,0,-64.1727 0/1:75:52,23:52:2020:23:927:-61.1554,0,-159.411 0/1:37:30,7:30:1192:7:275:-13.9788,0,-96.4166 0/1:83:54,29:54:2120:29:1138:-77.7163,0,-165.998 0/1:59:50,9:50:1969:9:359:-14.9118,0,-159.642 0/1:93:74,19:74:2960:19:742:-39.109,0,-238.497 dDocent_Contig_10112 16 . T C 5097.07 . AB=0.470284;ABP=5.97854;AC=6;AF=0.5;AN=12;AO=182;CIGAR=2X;DP=387;DPB=387;DPRA=0;EPP=398.218;EPPR=439.476;GTI=0;LEN=1;MEANALT=1.16667;MQM=49.9835;MQMR=59.7264;NS=6;NUMALT=2;ODDS=0;PAIRED=0.972527;PAIREDR=0.995025;PAO=0;PQA=0;PQR=0;PRO=0;QA=7269;QR=8024;RO=201;RPL=0;RPP=398.218;RPPR=439.476;RPR=182;RUN=1;SAF=182;SAP=398.218;SAR=0;SRF=201;SRP=439.476;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:67:26,41,0:26:1014:41,0:1646,0:-122.677,0,-71.3874,-130.504,-83.7296,-213.845 0|1:86:44,42,0:44:1748:42,0:1671,0:-120.679,0,-131.654,-133.924,-144.297,-277.829 0|1:56:37,19,0:37:1484:19,0:757,0:-51.0075,0,-116.943,-62.1456,-122.663,-184.412 0|1:75:39,36,0:39:1573:36,0:1423,0:-104.708,0,-119.227,-116.448,-130.064,-246.115 0|1:46:23,19,4:23:922:19,4:765,162:-55.5796,0,-70.2354,-49.144,-62.596,-123.899 0|1:57:32,25,0:32:1283:25,0:1007,0:-66.2784,0,-95.3294,-75.9114,-102.855,-178.389 dDocent_Contig_10113 16 . T C 505.579 . AB=0.117647;ABP=24.5973;AC=5;AF=0.416667;AN=12;AO=2;CIGAR=1X3M1X1M1X8M;DP=147;DPB=144.333;DPRA=1.13333;EPP=7.35324;EPPR=226.672;GTI=0;LEN=1;MEANALT=2;MQM=53;MQMR=60;NS=6;NUMALT=6;ODDS=0;PAIRED=0;PAIREDR=0.893204;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=3856;RO=103;RPL=0;RPP=7.35324;RPPR=226.672;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=103;SRP=226.672;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:22:15,0,1,3,2,0,0:15:567:0,1,3,2,0,0:0,39,116,65,0,0:-5.03422,-9.54967,-56.0378,-6.33848,-52.8311,-52.5301,0,-46.5072,-43.3002,-45.6041,-4.33937,-50.8186,-47.6121,-41.2886,-50.2166,-9.54967,-56.0378,-52.8311,-46.5072,-50.8186,-56.0378,-9.54967,-56.0378,-52.8311,-46.5072,-50.8186,-56.0378,-56.0378 0|1:17:12,0,3,0,0,2,0:12:441:0,3,0,0,2,0:0,117,0,0,81,0:-5.99734,-9.6097,-45.6422,0,-36.0216,-35.1185,-9.6097,-45.6422,-36.0216,-45.6422,-9.6097,-45.6422,-36.0216,-45.6422,-45.6422,-2.9596,-38.9936,-29.3717,-38.9936,-38.9936,-38.3915,-9.6097,-45.6422,-36.0216,-45.6422,-45.6422,-38.9936,-45.6422 0|1:34:23,2,0,8,1,0,0:23:868:2,0,8,1,0,0:80,0,303,41,0,0:-17.9004,-18.2307,-88.7591,-24.8241,-89.3612,-95.9526,0,-64.5194,-71.1111,-68.7029,-21.4375,-85.9761,-92.5676,-67.7259,-92.2665,-24.8241,-89.3612,-95.9526,-71.1111,-92.5676,-95.9526,-24.8241,-89.3612,-95.9526,-71.1111,-92.5676,-95.9526,-95.9526 0|1:33:28,0,0,3,2,0,0:28:1060:0,0,3,2,0,0:0,0,115,76,0,0:-0.818429,-9.24727,-96.1486,-9.24727,-96.1486,-96.1486,0,-86.8994,-86.8994,-85.9963,-3.0129,-89.9157,-89.9157,-80.6664,-89.3136,-9.24727,-96.1486,-96.1486,-86.8994,-89.9157,-96.1486,-9.24727,-96.1486,-96.1486,-86.8994,-89.9157,-96.1486,-96.1486 0|1:26:11,0,0,0,10,0,5:11:415:0,0,0,10,0,5:0,0,0,391,0,190:-28.8428,-32.1541,-66.1611,-32.1541,-66.1611,-66.1611,-32.1541,-66.1611,-66.1611,-66.1611,0,-34.0094,-34.0094,-34.0094,-30.9991,-32.1541,-66.1611,-66.1611,-66.1611,-34.0094,-66.1611,-16.5779,-50.582,-50.582,-50.582,-18.4287,-50.582,-49.0768 0|0:15:14,0,0,0,1,0,0:14:505:0,0,0,1,0,0:0,0,0,41,0,0:0,-4.21442,-45.3925,-4.21442,-45.3925,-45.3925,-4.21442,-45.3925,-45.3925,-45.3925,-0.591873,-42.1602,-42.1602,-42.1602,-41.8592,-4.21442,-45.3925,-45.3925,-45.3925,-42.1602,-45.3925,-4.21442,-45.3925,-45.3925,-45.3925,-42.1602,-45.3925,-45.3925 dDocent_Contig_10114 6 . C G 8366.72 . AB=0.0443038;ABP=857.966;AC=0;AF=0;AN=12;AO=21;CIGAR=1M1X5M1X;DP=521;DPB=531.875;DPRA=0;EPP=48.6112;EPPR=339.589;GTI=0;LEN=1;MEANALT=4.8;MQM=52.5714;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=784;QR=5946;RO=155;RPL=0;RPP=48.6112;RPPR=339.589;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=155;SRP=339.589;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:79:44,6,4,3,21:44:1673:6,4,3,21:231,153,110,856:-57.3996,-51.6813,-187.077,-58.1725,-176.409,-194.17,-62.2016,-180.437,-186.928,-198.499,0,-118.253,-124.745,-128.773,-130.898 0|0:115:56,22,5,30,0:56:2164:22,5,30,0:846,194,1198,0:-81.8211,-29.7068,-200.821,-82.7386,-191.504,-258.972,0,-108.773,-161.807,-168.716,-98.6787,-207.444,-260.477,-177.747,-276.418 0|0:77:36,3,5,31,2:36:1373:3,5,31,2:116,187,1211,81:-88.7118,-90.0207,-201.748,-84.2665,-187.368,-195.391,0,-103.104,-97.3491,-103.301,-92.8689,-195.972,-190.216,-105.952,-204.898 0|0:93:19,19,3,45,4:19:736:19,3,45,4:732,98,1769,162:-139.782,-85.5575,-140.303,-137.598,-138.119,-197.16,0,-0.522493,-52.5689,-46.9254,-132.142,-132.664,-184.704,-47.1108,-191.404 0|0:47:0,18,0,2,26:0:0:18,0,2,26:699,0,77,1056:-143.842,-87.1064,-81.6878,-143.842,-87.1064,-143.842,-137.521,-80.7863,-137.521,-136.919,-56.7359,0,-56.7359,-50.4145,-48.9092 0|0:110:0,18,4,86,0:0:0:18,4,86,0:702,152,3394,0:-336.316,-279.145,-273.727,-324.925,-267.755,-323.721,-57.2123,0,-45.8245,-31.3237,-336.316,-279.145,-324.925,-57.2123,-336.316 dDocent_Contig_10115 25 . G A 3230.9 . AB=0.152143;ABP=1474.46;AC=3;AF=0.25;AN=12;AO=269;CIGAR=1X;DP=2395;DPB=2395;DPRA=0;EPP=587.136;EPPR=4615.22;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999058;PAO=0;PQA=0;PQR=0;PRO=0;QA=10496;QR=83588;RO=2124;RPL=0;RPP=587.136;RPPR=4615.22;RPR=269;RUN=1;SAF=269;SAP=587.136;SAR=0;SRF=2124;SRP=4615.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:349:332,17:332:13107:17:668:0,-44.6084,-1118.25 0/1:453:346,107:346:13764:107:4139:-236.156,0,-1101.39 0/0:203:188,14:188:7465:14:557:0,-10.5216,-621.03 0/0:443:418,25:418:16327:25:947:0,-47.8225,-1382.68 0/1:479:419,59:419:16483:59:2316:-64.6153,0,-1338.22 0/1:468:421,47:421:16442:47:1869:-27.5405,0,-1337.66 dDocent_Contig_10116 109 . G A 2894.16 . AB=0.647436;ABP=32.4644;AC=6;AF=0.5;AN=12;AO=101;CIGAR=1X;DP=156;DPB=156;DPRA=0;EPP=222.329;EPPR=120.27;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.742574;PAIREDR=0.851852;PAO=0;PQA=0;PQR=0;PRO=0;QA=3841;QR=2047;RO=54;RPL=0;RPP=222.329;RPPR=120.27;RPR=101;RUN=1;SAF=0;SAP=222.329;SAR=101;SRF=0;SRP=120.27;SRR=54;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:5,30:5:195:30:1149:-93.1734,0,-7.38815 0/1:22:10,12:10:385:12:466:-35.6695,0,-28.3838 0/1:35:16,19:16:613:19:736:-56.0352,0,-44.9719 0/1:36:7,29:7:257:29:1082:-86.8374,0,-12.6453 0/1:14:9,4:9:342:4:156:-10.1142,0,-26.8325 0/1:14:7,7:7:255:7:252:-18.8086,0,-19.0838 dDocent_Contig_10117 26 . C T 130.456 . AB=0.25;ABP=16.0391;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=2X;DP=274;DPB=274;DPRA=0.734177;EPP=20.3821;EPPR=580.622;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0.996241;PAO=0;PQA=0;PQR=0;PRO=0;QA=320;QR=10446;RO=266;RPL=0;RPP=20.3821;RPPR=580.622;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=266;SRP=580.622;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:46:45,1:45:1769:1:41:0,-9.75281,-155.342 0|0:46:45,1:45:1771:1:41:0,-9.75281,-155.519 0|1:24:18,6:18:687:6:238:-14.5685,0,-54.9283 0|0:49:49,0:49:1929:0:0:0,-14.7505,-173.812 0|0:64:64,0:64:2500:0:0:0,-19.2659,-225.149 0|0:45:45,0:45:1790:0:0:0,-13.5463,-161.318 dDocent_Contig_10118 7 . T C 147.774 . AB=0.114943;ABP=227.096;AC=2;AF=0.166667;AN=12;AO=28;CIGAR=1X;DP=561;DPB=561;DPRA=0.927835;EPP=63.8115;EPPR=1160.41;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9174;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.998124;PAO=0;PQA=0;PQR=0;PRO=0;QA=1080;QR=20386;RO=533;RPL=0;RPP=63.8115;RPPR=1160.41;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=533;SRP=1160.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:79:79,0:79:3037:0:0:0,-23.7814,-273.492 0/1:103:90,13:90:3436:13:501:-14.4323,0,-278.369 0/1:71:64,7:64:2429:7:273:-3.56488,0,-197.43 0/0:96:88,8:88:3380:8:306:0,-0.998289,-276.435 0/0:109:109,0:109:4152:0:0:0,-32.8123,-372.913 0/0:103:103,0:103:3952:0:0:0,-31.0061,-355.777 dDocent_Contig_10119 13 . C A 81.1704 . AB=0.222222;ABP=15.074;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=325;DPB=325;DPRA=0.249135;EPP=13.8677;EPPR=697.881;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.853125;PAO=0;PQA=0;PQR=0;PRO=0;QA=203;QR=12753;RO=320;RPL=0;RPP=13.8677;RPPR=697.881;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=320;SRP=697.881;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:407:0:0:0,-3.0103,-36.9904 0/1:18:14,4:14:535:4:163:-9.63989,0,-43.0638 0/0:19:19,0:19:758:0:0:0,-5.71957,-68.5386 0/0:18:17,1:17:682:1:40:0,-1.42286,-57.713 0/0:159:159,0:159:6344:0:0:0,-47.8638,-570.701 0/0:101:101,0:101:4027:0:0:0,-30.404,-362.412 dDocent_Contig_10120 16 . G A 2944.38 . AB=0.504902;ABP=3.05288;AC=6;AF=0.5;AN=12;AO=103;CIGAR=1X;DP=204;DPB=204;DPRA=0;EPP=226.672;EPPR=220.158;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.669903;PAIREDR=0.78;PAO=0;PQA=0;PQR=0;PRO=0;QA=4058;QR=3950;RO=100;RPL=0;RPP=226.672;RPPR=220.158;RPR=103;RUN=1;SAF=103;SAP=226.672;SAR=0;SRF=100;SRP=220.158;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:13,11:13:501:11:437:-32.0515,0,-37.7924 0/1:36:21,15:21:839:15:591:-42.687,0,-64.9879 0/1:23:14,9:14:558:9:365:-26.2908,0,-43.6379 0/1:22:4,18:4:162:18:713:-57.8758,0,-8.3443 0/1:39:17,22:17:665:22:854:-65.4186,0,-48.4412 0/1:59:31,28:31:1225:28:1098:-81.3364,0,-92.7683 dDocent_Contig_10123 21 . G C 137.549 . AB=0.5;ABP=3.0103;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=142;DPB=142;DPRA=0.378788;EPP=13.8677;EPPR=300.502;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=8.67362e-19;PAIRED=1;PAIREDR=0.518248;PAO=0;PQA=0;PQR=0;PRO=0;QA=199;QR=5295;RO=137;RPL=0;RPP=13.8677;RPPR=300.502;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=137;SRP=300.502;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:829:0:0:0,-6.32163,-74.9302 0/0:34:34,0:34:1291:0:0:0,-10.235,-116.471 0/0:15:15,0:15:589:0:0:0,-4.51545,-53.3468 0/0:31:31,0:31:1203:0:0:0,-9.33193,-108.553 0/0:31:31,0:31:1207:0:0:0,-9.33193,-108.915 0/1:10:5,5:5:176:5:199:-15.2778,0,-13.167 dDocent_Contig_10124 27 . T C 167.864 . AB=0.15942;ABP=72.5289;AC=1;AF=0.0833333;AN=12;AO=24;CIGAR=1X;DP=378;DPB=378;DPRA=1.44845;EPP=55.1256;EPPR=769.54;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.974504;PAO=0;PQA=0;PQR=0;PRO=0;QA=948;QR=14049;RO=353;RPL=0;RPP=55.1256;RPPR=769.54;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=353;SRP=769.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:69:58,11:58:2322:11:427:-18.0082,0,-188.364 0/0:62:58,4:58:2311:4:163:0,-3.60543,-193.092 0/0:87:80,6:80:3178:6:243:0,-3.78411,-263.868 0/0:63:60,3:60:2389:3:115:0,-8.24079,-204.438 0/0:60:60,0:60:2383:0:0:0,-18.0618,-214.627 0/0:37:37,0:37:1466:0:0:0,-11.1381,-132.184 dDocent_Contig_10125 29 . T C 216.54 . AB=0.111969;ABP=341.735;AC=3;AF=0.25;AN=12;AO=35;CIGAR=1X;DP=496;DPB=496;DPRA=1.18707;EPP=79.0118;EPPR=1004.06;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1392;QR=17931;RO=461;RPL=0;RPP=79.0118;RPPR=1004.06;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=461;SRP=1004.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:57:51,6:51:2007:6:231:-3.9954,0,-163.68 0/0:90:84,6:84:3295:6:239:0,-5.20881,-274.749 0/1:81:69,12:69:2712:12:480:-19.167,0,-219.839 0/1:121:110,11:110:4213:11:442:-3.71134,0,-342.759 0/0:67:67,0:67:2560:0:0:0,-20.169,-230.554 0/0:80:80,0:80:3144:0:0:0,-24.0824,-283.056 dDocent_Contig_10126 16 . T A 68.2142 . AB=0.181818;ABP=22.3561;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=209;DPB=209;DPRA=0.699187;EPP=16.0391;EPPR=443.819;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.166667;PAIREDR=0.507389;PAO=0;PQA=0;PQR=0;PRO=0;QA=243;QR=8186;RO=203;RPL=0;RPP=16.0391;RPPR=443.819;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=203;SRP=443.819;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1099:0:0:0,-8.12781,-99.1921 0/0:26:25,1:25:1008:1:40:0,-3.8311,-87.0185 0/1:22:18,4:18:731:4:162:-8.3443,0,-59.4903 0/0:31:31,0:31:1260:0:0:0,-9.33193,-113.664 0/0:38:37,1:37:1493:1:41:0,-7.34457,-130.515 0/0:65:65,0:65:2595:0:0:0,-19.5669,-233.676 dDocent_Contig_10127 37 . C A 609.891 . AB=0.196203;ABP=129.67;AC=1;AF=0.0833333;AN=12;AO=44;CIGAR=1X;DP=836;DPB=836;DPRA=1.05714;EPP=98.5551;EPPR=1720.64;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.994943;PAO=0;PQA=0;PQR=0;PRO=0;QA=1741;QR=31755;RO=791;RPL=0;RPP=98.5551;RPPR=1720.64;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=791;SRP=1720.64;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:131:130,1:130:5246:1:41:0,-35.3404,-467.87 0/0:145:136,9:136:5406:9:357:0,-11.158,-453.874 0/0:127:124,2:124:4951:2:82:0,-30.4133,-437.736 0/1:158:127,31:127:5099:31:1220:-62.512,0,-411.202 0/0:133:133,0:133:5365:0:0:0,-40.037,-482.668 0/0:142:141,1:141:5688:1:41:0,-38.6517,-507.604 dDocent_Contig_10128 47 . G A 797.55 . AB=0.146214;ABP=419.394;AC=5;AF=0.416667;AN=12;AO=60;CIGAR=1X;DP=444;DPB=444;DPRA=0;EPP=133.299;EPPR=735.882;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.7448;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0.606771;PAO=0;PQA=0;PQR=0;PRO=0;QA=2414;QR=15183;RO=384;RPL=0;RPP=133.299;RPPR=735.882;RPR=60;RUN=1;SAF=60;SAP=133.299;SAR=0;SRF=384;SRP=836.856;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:64:55,9:55:2178:9:354:-12.953,0,-176.929 0/1:104:85,19:85:3364:19:760:-37.4146,0,-270.895 0/1:63:52,11:52:2021:11:446:-21.5311,0,-163.116 0/1:77:69,8:69:2748:8:325:-6.44033,0,-223.767 0/0:61:57,4:57:2244:4:164:0,-3.21293,-186.98 0/1:75:66,9:66:2628:9:365:-10.6378,0,-213.891 dDocent_Contig_10129 43 . C T 4322.75 . AB=0.604651;ABP=23.4625;AC=7;AF=0.583333;AN=12;AO=153;CIGAR=1X;DP=238;DPB=238;DPRA=0;EPP=5.40885;EPPR=5.07959;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.51634;PAIREDR=0.705882;PAO=0;PQA=0;PQR=0;PRO=0;QA=5604;QR=3142;RO=85;RPL=0;RPP=335.246;RPPR=187.585;RPR=153;RUN=1;SAF=83;SAP=5.40885;SAR=70;SRF=47;SRP=5.07959;SRR=38;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:23:0,23:0:0:23:854:-77.1756,-6.92369,0 0/1:34:9,25:9:336:25:937:-74.4044,0,-20.3565 0/1:33:16,17:16:589:17:614:-45.6459,0,-43.4044 0/1:80:23,57:23:826:57:2060:-161.562,0,-50.5687 0/1:42:22,20:22:824:20:727:-53.1091,0,-61.8291 0/1:26:15,11:15:567:11:412:-29.6002,0,-43.5388 dDocent_Contig_10130 69 . G A 41.0952 . AB=0.4;ABP=3.44459;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=2X;DP=80;DPB=80;DPRA=1.63636;EPP=9.52472;EPPR=170.214;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=109;QR=2896;RO=77;RPL=3;RPP=9.52472;RPPR=170.214;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=77;SRP=170.214;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:5:3,2:3:114:2:72:-5.33122,0,-9.12707 0|0:31:30,1:30:1099:1:37:0,-5.6341,-95.5121 0|0:5:5,0:5:188:0:0:0,-1.50515,-17.284 0|0:22:22,0:22:843:0:0:0,-6.62266,-76.1919 0|0:3:3,0:3:116:0:0:0,-0.90309,-10.8177 0|0:14:14,0:14:536:0:0:0,-4.21442,-48.5852 dDocent_Contig_10131 28 . G A 20616.1 . AB=0.617124;ABP=76.7667;AC=8;AF=0.666667;AN=12;AO=660;CIGAR=1X;DP=911;DPB=911;DPRA=0;EPP=1027.43;EPPR=520.133;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.843939;PAIREDR=0.98;PAO=0;PQA=0;PQR=0;PRO=0;QA=25603;QR=9692;RO=250;RPL=0;RPP=1436.18;RPPR=545.878;RPR=660;RUN=1;SAF=609;SAP=1027.43;SAR=51;SRF=247;SRP=520.133;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:137:62,74:62:2385:74:2787:-209.598,0,-173.469 0/1:206:90,116:90:3526:116:4492:-342.244,0,-255.393 0/1:111:37,74:37:1423:74:2868:-224.828,0,-94.9083 0/1:165:47,118:47:1818:118:4551:-359.89,0,-114.182 1/1:163:14,149:14:540:149:5871:-479.294,-0.136958,0 1/1:129:0,129:0:0:129:5034:-452.982,-38.8329,0 dDocent_Contig_10132 26 . T A 3701.09 . AB=0.207657;ABP=642.904;AC=4;AF=0.333333;AN=12;AO=179;CIGAR=1X;DP=895;DPB=895;DPRA=13.0606;EPP=391.704;EPPR=1557.78;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7066;QR=28013;RO=716;RPL=0;RPP=391.704;RPPR=1557.78;RPR=179;RUN=1;SAF=179;SAP=391.704;SAR=0;SRF=716;SRP=1557.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:121:80,41:80:3050:41:1633:-110.784,0,-238.169 0/1:374:303,71:303:11864:71:2767:-136.563,0,-954.436 0/1:173:129,44:129:5074:44:1758:-106.359,0,-404.483 0/1:194:171,23:171:6749:23:908:-23.6249,0,-548.744 0/0:26:26,0:26:1014:0:0:0,-7.82678,-91.5594 0/0:7:7,0:7:262:0:0:0,-2.10721,-23.9328 dDocent_Contig_10134 38 . T C 2232.16 . AB=0.382514;ABP=24.9505;AC=7;AF=0.583333;AN=12;AO=92;CIGAR=1M1X3M1X3M1X2M11I2M1X2M;DP=227;DPB=315.471;DPRA=0;EPP=202.786;EPPR=76.8404;GTI=0;LEN=1;MEANALT=7.33333;MQM=46.0435;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0.728261;PAIREDR=1;PAO=1.8;PQA=0;PQR=0;PRO=1.8;QA=3043;QR=1350;RO=34;RPL=0;RPP=202.786;RPPR=76.8404;RPR=92;RUN=1;SAF=92;SAP=202.786;SAR=0;SRF=34;SRP=76.8404;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:21:3,11,0,0,0:3:120:11,0,0,0:404,0,0,0:-31.835,0,-6.59404,-32.738,-9.90537,-42.6301,-32.738,-9.90537,-42.6301,-42.6301,-32.738,-9.90537,-42.6301,-42.6301,-42.6301 0|1:54:9,23,2,0,2:9:355:23,2,0,2:680,67,0,39:-48.7957,0,-22.3118,-46.0791,-23.8112,-74.7039,-51.5049,-29.2355,-75.306,-80.7308,-49.1401,-26.876,-72.9409,-78.3656,-77.7635 0|1:31:5,9,0,0,0:5:200:9,0,0,0:260,0,0,0:-18.0738,0,-13.7848,-19.579,-16.4941,-36.07,-19.579,-16.4941,-36.07,-36.07,-19.579,-16.4941,-36.07,-36.07,-36.07 1|1:44:1,22,0,0,0:1:36:22,0,0,0:801,0,0,0:-67.9092,-3.68535,0,-68.2102,-6.62266,-71.1476,-68.2102,-6.62266,-71.1476,-71.1476,-68.2102,-6.62266,-71.1476,-71.1476,-71.1476 0|1:35:7,17,0,3,0:7:280:17,0,3,0:555,0,120,0:-41.2666,0,-17.9514,-43.3738,-23.0689,-66.4499,-33.4937,-13.1941,-56.5722,-55.6691,-43.3738,-23.0689,-66.4499,-56.5722,-66.4499 0|1:42:9,10,0,0,0:9:359:10,0,0,0:343,0,0,0:-24.558,0,-26.5648,-27.2673,-29.5751,-56.8422,-27.2673,-29.5751,-56.8422,-56.8422,-27.2673,-29.5751,-56.8422,-56.8422,-56.8422 dDocent_Contig_10138 126 . A G 8608.3 . AB=0;ABP=0;AC=4;AF=0.333333;AN=12;AO=302;CIGAR=1X4M;DP=1026;DPB=1026;DPRA=0.910638;EPP=658.795;EPPR=1529.56;GTI=0;LEN=1;MEANALT=2;MQM=36.8808;MQMR=37.074;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10120;QR=25980;RO=703;RPL=0;RPP=658.795;RPPR=1529.56;RPR=302;RUN=1;SAF=0;SAP=658.795;SAR=302;SRF=0;SRP=1529.56;SRR=703;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:207:206,0,0:206:7609:0,0:0,0:0,-62.0122,-620.088,-62.0122,-620.088,-620.088 0|0:174:173,1,0:173:6423:1,0:37,0:0,-48.8556,-494.557,-52.0782,-494.858,-497.729 0|0:106:106,0,0:106:3899:0,0:0,0:0,-31.9092,-314.218,-31.9092,-314.218,-314.218 0|0:218:217,0,0:217:8011:0,0:0,0:0,-65.3235,-631.597,-65.3235,-631.597,-631.597 1|1:150:0,0,148:0:0:0,148:0,4677:-396.531,-396.531,-396.531,-44.5524,-44.5524,0 1|1:171:1,16,154:1:38:16,154:558,5443:-463.521,-420.56,-418.671,-43.4294,-3.11943,0 dDocent_Contig_10139 19 . T A 871.195 . AB=0.121212;ABP=44.1367;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1M3D2X2M1X2M1X2M2I1X3M1X1M1X15M;DP=190;DPB=184.972;DPRA=0;EPP=11.6962;EPPR=263.587;GTI=0;LEN=1;MEANALT=8;MQM=60;MQMR=60;NS=6;NUMALT=7;ODDS=0;PAIRED=0.25;PAIREDR=0.616667;PAO=0;PQA=0;PQR=0;PRO=0;QA=160;QR=4724;RO=120;RPL=0;RPP=11.6962;RPPR=263.587;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=120;SRP=263.587;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:25:17,0,0,0,6,1,0,0:17:671:0,0,0,6,1,0,0:0,0,0,240,40,0,0:-14.6524,-19.7699,-74.9768,-19.7699,-74.9768,-74.9768,-19.7699,-74.9768,-74.9768,-74.9768,0,-55.2057,-55.2057,-55.2057,-53.3996,-16.4748,-71.6815,-71.6815,-71.6815,-51.9104,-71.3805,-19.7699,-74.9768,-74.9768,-74.9768,-55.2057,-71.6815,-74.9768,-19.7699,-74.9768,-74.9768,-74.9768,-55.2057,-71.6815,-74.9768,-74.9768 0|1:33:18,2,4,2,1,0,3,0:18:710:2,4,2,1,0,3,0:80,160,81,40,0,121,0:-7.76107,-6.58975,-64.4001,0,-51.8215,-57.2077,-6.49999,-58.3225,-51.7322,-64.3108,-9.88467,-61.707,-55.1167,-61.6177,-67.9963,-13.1796,-65.0022,-58.4119,-64.9129,-68.2973,-71.5925,-3.20524,-55.0275,-48.4372,-54.9382,-58.3227,-61.6179,-60.7148,-13.1796,-65.0022,-58.4119,-64.9129,-68.2973,-71.5925,-61.6179,-71.5925 0|0:38:26,0,0,0,11,1,0,0:26:1026:0,0,0,11,1,0,0:0,0,0,430,41,0,0:-27.5018,-35.3286,-119.75,-35.3286,-119.75,-119.75,-35.3286,-119.75,-119.75,-119.75,0,-84.4057,-84.4057,-84.4057,-81.0943,-31.943,-116.366,-116.366,-116.366,-81.021,-116.065,-35.3286,-119.75,-119.75,-119.75,-84.4057,-116.366,-119.75,-35.3286,-119.75,-119.75,-119.75,-84.4057,-116.366,-119.75,-119.75 0|0:32:19,0,0,0,2,6,3,0:19:744:0,0,0,2,6,3,0:0,0,0,71,237,122,0:-13.7831,-19.5027,-80.6789,-19.5027,-80.6789,-80.6789,-19.5027,-80.6789,-80.6789,-80.6789,-13.7247,-74.8967,-74.8967,-74.8967,-74.2946,0,-61.1778,-61.1778,-61.1778,-55.3961,-59.3716,-9.43516,-70.6142,-70.6142,-70.6142,-64.8321,-51.1126,-69.7111,-19.5027,-80.6789,-80.6789,-80.6789,-74.8967,-61.1778,-70.6142,-80.6789 0|0:19:15,0,0,0,3,0,0,1:15:587:0,0,0,3,0,0,1:0,0,0,121,0,0,40:-5.46127,-9.97671,-58.2299,-9.97671,-58.2299,-58.2299,-9.97671,-58.2299,-58.2299,-58.2299,0,-48.2539,-48.2539,-48.2539,-47.3508,-9.97671,-58.2299,-58.2299,-58.2299,-48.2539,-58.2299,-9.97671,-58.2299,-58.2299,-58.2299,-48.2539,-58.2299,-58.2299,-6.68246,-54.9345,-54.9345,-54.9345,-44.9582,-54.9345,-54.9345,-54.6334 0|0:43:25,0,0,0,6,0,0,11:25:986:0,0,0,6,0,0,11:0,0,0,226,0,0,445:-29.1816,-36.7073,-117.832,-36.7073,-117.832,-117.832,-36.7073,-117.832,-117.832,-117.832,-18.1981,-99.3174,-99.3174,-99.3174,-97.5112,-36.7073,-117.832,-117.832,-117.832,-99.3174,-117.832,-36.7073,-117.832,-117.832,-117.832,-99.3174,-117.832,-117.832,0,-81.1381,-81.1381,-81.1381,-62.6235,-81.1381,-81.1381,-77.8268 dDocent_Contig_10140 15 . C G 45.0345 . AB=0.12;ABP=65.7224;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=175;DPB=175;DPRA=1.18269;EPP=20.3821;EPPR=365.646;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8563;NS=6;NUMALT=1;ODDS=0;PAIRED=0.375;PAIREDR=0.443114;PAO=0;PQA=0;PQR=0;PRO=0;QA=321;QR=6724;RO=167;RPL=0;RPP=20.3821;RPPR=365.646;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=167;SRP=365.646;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:32,1:32:1297:1:37:0,-6.23616,-113.023 0/0:36:36,0:36:1465:0:0:0,-10.8371,-132.091 0/1:30:27,3:27:1062:3:122:-2.34159,0,-86.8325 0/0:40:39,1:39:1577:1:40:0,-8.04552,-138.165 0/1:20:17,3:17:678:3:122:-5.35189,0,-55.3295 0/0:16:16,0:16:645:0:0:0,-4.81648,-58.383 dDocent_Contig_10141 14 . G A 448.325 . AB=0.128834;ABP=393.103;AC=4;AF=0.333333;AN=12;AO=44;CIGAR=1X;DP=555;DPB=555;DPRA=1.97647;EPP=98.5551;EPPR=1112.63;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.103718;PAO=0;PQA=0;PQR=0;PRO=0;QA=1731;QR=20459;RO=511;RPL=0;RPP=98.5551;RPPR=1112.63;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=511;SRP=1112.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:45:36,9:36:1440:9:344:-17.7681,0,-116.3 0/1:117:104,13:104:4179:13:512:-11.2057,0,-340.847 0/1:79:71,8:71:2836:8:321:-5.47712,0,-231.559 0/1:85:73,12:73:2935:12:476:-17.6034,0,-238.648 0/0:51:51,0:51:2022:0:0:0,-15.3525,-182.17 0/0:178:176,2:176:7047:2:78:0,-46.18,-626.488 dDocent_Contig_10142 16 . C T 1311.1 . AB=0.203762;ABP=246.168;AC=5;AF=0.416667;AN=12;AO=70;CIGAR=1X;DP=381;DPB=381;DPRA=0;EPP=155.013;EPPR=678.338;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2784;QR=12518;RO=311;RPL=0;RPP=155.013;RPPR=678.338;RPR=70;RUN=1;SAF=70;SAP=155.013;SAR=0;SRF=311;SRP=678.338;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:40:33,7:33:1333:7:283:-13.8024,0,-108.187 0/1:58:45,13:45:1823:13:519:-29.5968,0,-146.81 0/0:62:57,5:57:2278:5:177:0,-2.39535,-188.907 0/1:69:43,26:43:1717:26:1040:-73.1186,0,-133.978 0/1:76:67,9:67:2706:9:363:-10.156,0,-220.769 0/1:76:66,10:66:2661:10:402:-13.6584,0,-216.725 dDocent_Contig_10143 26 . G C 1137.57 . AB=0.176796;ABP=331.466;AC=6;AF=0.5;AN=12;AO=64;CIGAR=1X;DP=362;DPB=362;DPRA=0;EPP=141.985;EPPR=650.109;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.890625;PAIREDR=0.869128;PAO=0;PQA=0;PQR=0;PRO=0;QA=2573;QR=11856;RO=298;RPL=0;RPP=141.985;RPPR=650.109;RPR=64;RUN=1;SAF=64;SAP=141.985;SAR=0;SRF=298;SRP=650.109;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:32,4:32:1249:4:164:-4.31282,0,-101.844 0/1:93:66,27:66:2610:27:1084:-69.851,0,-207.037 0/1:83:70,13:70:2827:13:514:-21.6209,0,-229.542 0/1:60:50,10:50:1980:10:404:-18.6578,0,-160.33 0/1:44:40,4:40:1587:4:163:-1.81311,0,-129.818 0/1:46:40,6:40:1603:6:244:-8.49145,0,-130.65 dDocent_Contig_10144 11 . G A 459.365 . AB=0.10929;ABP=245.658;AC=3;AF=0.25;AN=12;AO=20;CIGAR=1X2M1X1M;DP=225;DPB=225;DPRA=0;EPP=9.95901;EPPR=264.653;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0;PAIREDR=0.824242;PAO=0;PQA=0;PQR=0;PRO=0;QA=760;QR=6431;RO=165;RPL=0;RPP=46.4397;RPPR=361.303;RPR=20;RUN=1;SAF=14;SAP=9.95901;SAR=6;SRF=153;SRP=264.653;SRR=12;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:25:17,5,2,1,0:17:640:5,2,1,0:191,72,41,0:-10.554,0,-50.9303,-9.8033,-46.5625,-61.6294,-12.2832,-49.0497,-58.846,-64.4184,-15.6715,-52.4355,-62.2315,-64.7194,-68.1048 0|0:37:27,2,0,6,2:27:1058:2,0,6,2:70,0,245,73:-12.118,-14.5597,-100.953,-20.2458,-101.555,-107.248,0,-81.336,-87.0289,-85.2228,-14.287,-95.5919,-101.285,-81.066,-100.683 0|0:42:30,0,0,5,3:30:1148:0,0,5,3:0,0,205,117:-7.92213,-16.953,-111.168,-16.953,-111.168,-111.168,0,-94.243,-94.243,-92.7378,-7.32853,-101.551,-101.551,-84.6256,-100.648 0|1:41:30,5,0,2,1:30:1187:5,0,2,1:198,0,81,36:-7.2646,0,-96.1833,-16.2955,-97.6884,-113.984,-9.61423,-91.0087,-107.304,-106.702,-13.3616,-94.752,-111.047,-104.367,-110.746 0|0:50:42,2,0,6,0:42:1655:2,0,6,0:78,0,236,0:-6.76978,-13.0023,-148.556,-19.413,-149.158,-155.57,0,-129.748,-136.159,-134.353,-19.413,-149.158,-155.57,-136.159,-155.57 0|1:30:19,6,0,5,0:19:743:6,0,5,0:223,0,186,0:-12.5298,0,-59.2955,-18.2494,-61.1017,-79.3481,-3.02912,-45.8855,-64.1304,-62.6252,-18.2494,-61.1017,-79.3481,-64.1304,-79.3481 dDocent_Contig_10149 60 . A G 274.543 . AB=0.245283;ABP=32.8783;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=107;DPB=107;DPRA=1.96296;EPP=31.2394;EPPR=204.957;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=510;QR=3654;RO=93;RPL=13;RPP=31.2394;RPPR=204.957;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=93;SRP=204.957;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:8:8,0:8:324:0:0:0,-2.40824,-29.5288 0/0:8:8,0:8:304:0:0:0,-2.40824,-27.7101 0/0:18:18,0:18:702:0:0:0,-5.41854,-63.505 0/0:20:19,0:19:750:0:0:0,-5.71957,-67.4114 0/1:18:11,7:11:419:7:285:-20.6059,0,-32.6367 0/1:35:29,6:29:1155:6:225:-10.0703,0,-93.6969 dDocent_Contig_10151 43 . T A 44.5901 . AB=0.142857;ABP=34.0313;AC=2;AF=0.166667;AN=12;AO=4;CIGAR=1X;DP=114;DPB=114;DPRA=0.651163;EPP=11.6962;EPPR=241.872;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=0.75;PAIREDR=0.536364;PAO=0;PQA=0;PQR=0;PRO=0;QA=160;QR=4387;RO=110;RPL=0;RPP=11.6962;RPPR=241.872;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=110;SRP=241.872;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:648:0:0:0,-4.81648,-58.6539 0/0:26:26,0:26:1031:0:0:0,-7.82678,-93.0866 0/0:25:25,0:25:997:0:0:0,-7.52575,-90.0247 0/0:19:19,0:19:772:0:0:0,-5.71957,-69.7993 0/1:11:10,1:10:394:1:41:-0.783237,0,-32.5023 0/1:17:14,3:14:545:3:119:-5.9775,0,-44.2698 dDocent_Contig_10152 27 . A G 652.104 . AB=0.4;ABP=7.35324;AC=6;AF=0.5;AN=12;AO=25;CIGAR=1X;DP=74;DPB=74;DPRA=0;EPP=57.2971;EPPR=109.412;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.88;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=992;QR=1948;RO=49;RPL=0;RPP=57.2971;RPPR=109.412;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=49;SRP=109.412;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:10,11:10:394:11:436:-33.2719,0,-29.4964 0/0:20:19,1:19:753:1:41:0,-1.92603,-63.9976 0/1:12:7,5:7:284:5:193:-14.1272,0,-22.3214 0/1:11:9,2:9:358:2:81:-4.3744,0,-29.2708 1/1:4:0,4:0:0:4:162:-14.967,-1.20412,0 0/1:6:4,2:4:159:2:79:-5.69145,0,-12.8853 dDocent_Contig_10153 19 . A T 32.1668 . AB=0.125;ABP=32.3252;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=4M1X3M;DP=225;DPB=222.75;DPRA=1.33333;EPP=13.8677;EPPR=459.02;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.8;PAIREDR=0.490476;PAO=0;PQA=0;PQR=0;PRO=0;QA=197;QR=8228;RO=210;RPL=0;RPP=13.8677;RPPR=459.02;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=210;SRP=459.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:24:17,2,3:17:673:2,3:76,116:-4.43823,-3.30955,-58.1433,0,-49.2185,-54.5483 0|0:66:58,4,2:58:2285:4,2:159,81:0,-4.33525,-191.177,-10.7669,-185.702,-198.191 0|0:21:21,0,0:21:838:0,0:0,0:0,-6.32163,-75.7371,-6.32163,-75.7371,-75.7371 0|0:32:32,0,0:32:1237:0,0:0,0:0,-9.63296,-111.613,-9.63296,-111.613,-111.613 0|0:44:44,0,0:44:1710:0,0:0,0:0,-13.2453,-154.14,-13.2453,-154.14,-154.14 0|0:38:38,0,0:38:1485:0,0:0,0:0,-11.4391,-133.908,-11.4391,-133.908,-133.908 dDocent_Contig_10154 13 . T A 1106.22 . AB=0.316547;ABP=43.6434;AC=4;AF=0.333333;AN=12;AO=46;CIGAR=1X;DP=227;DPB=227;DPRA=1.42143;EPP=102.898;EPPR=396.047;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.983425;PAO=0;PQA=0;PQR=0;PRO=0;QA=1836;QR=7293;RO=181;RPL=0;RPP=102.898;RPPR=396.047;RPR=46;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=181;SRP=396.047;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:50:22,28:22:880:28:1121:-86.1244,0,-64.4546 0/0:60:58,2:58:2328:2:78:0,-10.6585,-202.267 0/1:33:23,10:23:925:10:394:-25.884,0,-73.6169 0/1:30:27,3:27:1096:3:121:-2.24909,0,-89.8931 0/0:28:28,0:28:1133:0:0:0,-8.42884,-102.247 0/1:26:23,3:23:931:3:122:-3.54571,0,-76.2634 dDocent_Contig_10155 20 . T A 2536.11 . AB=0.394068;ABP=26.0132;AC=6;AF=0.5;AN=12;AO=93;CIGAR=1X;DP=236;DPB=236;DPRA=0;EPP=204.957;EPPR=309.188;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.709677;PAIREDR=0.794326;PAO=0;PQA=0;PQR=0;PRO=0;QA=3712;QR=5575;RO=141;RPL=0;RPP=204.957;RPPR=309.188;RPR=93;RUN=1;SAF=93;SAP=204.957;SAR=0;SRF=141;SRP=309.188;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:43:17,26:17:667:26:1031:-80.1389,0,-47.4163 0/1:29:17,11:17:667:11:439:-31.0267,0,-51.517 0/1:38:24,14:24:965:14:565:-39.7529,0,-75.7088 0/1:34:28,6:28:1097:6:245:-12.1945,0,-88.7803 0/1:46:29,17:29:1142:17:671:-46.8679,0,-89.2189 0/1:46:26,19:26:1037:19:761:-54.8525,0,-79.6719 dDocent_Contig_10157 7 . T G 55.0666 . AB=0.206897;ABP=24.6501;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=125;DPB=125;DPRA=1.51042;EPP=16.0391;EPPR=111.201;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8824;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.605042;PAO=0;PQA=0;PQR=0;PRO=0;QA=172;QR=4472;RO=119;RPL=0;RPP=16.0391;RPPR=261.416;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=98;SRP=111.201;SRR=21;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1229:0:0:0,-9.93399,-110.902 0/1:29:23,6:23:858:6:172:-7.02907,0,-68.8106 0/0:30:30,0:30:1145:0:0:0,-9.0309,-103.351 0/0:29:29,0:29:1084:0:0:0,-8.72987,-97.8584 0/0:3:3,0:3:117:0:0:0,-0.90309,-10.8399 0/0:1:1,0:1:39:0:0:0,-0.30103,-3.89656 dDocent_Contig_10158 129 . G A 795.732 . AB=0.0967742;ABP=46.79;AC=0;AF=0;AN=12;AO=3;CIGAR=2X3M;DP=161;DPB=161;DPRA=1.08772;EPP=9.52472;EPPR=120.27;GTI=0;LEN=1;MEANALT=2;MQM=29;MQMR=31.5556;NS=6;NUMALT=4;ODDS=0;PAIRED=0;PAIREDR=0.462963;PAO=0;PQA=0;PQR=0;PRO=0;QA=87;QR=1846;RO=54;RPL=0;RPP=9.52472;RPPR=120.27;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=120.27;SRR=54;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:20:10,0,2,0,6:10:344:0,2,0,6:0,69,0,206:-3.44955,-6.45985,-24.176,-6.18998,-23.8948,-23.2927,-6.45985,-24.176,-23.8948,-24.176,0,-17.7241,-17.4539,-17.7241,-15.918 0|0:33:12,4,0,0,17:12:414:4,0,0,17:126,0,0,570:-16.5191,-18.0206,-32.2806,-20.1314,-33.4848,-35.6,-20.1314,-33.4848,-35.6,-35.6,0,-13.4188,-15.5223,-15.5223,-10.4048 0|0:20:11,0,0,0,9:11:383:0,0,0,9:0,0,0,303:-3.53768,-6.84901,-22.2893,-6.84901,-22.2893,-22.2893,-6.84901,-22.2893,-22.2893,-22.2893,0,-15.5894,-15.5894,-15.5894,-12.8801 0|0:31:16,0,0,3,12:16:532:0,0,3,12:0,0,87,411:-10.2122,-15.0287,-42.3364,-15.0287,-42.3364,-42.3364,-8.89651,-36.2158,-36.2158,-35.3128,0,-27.2598,-27.2598,-21.1391,-23.6474 0|0:32:3,2,0,0,27:3:103:2,0,0,27:67,0,0,905:-23.2022,-23.8117,-23.7407,-24.1053,-24.3428,-24.637,-24.1053,-24.3428,-24.637,-24.637,-7.58994,-7.83201,-8.12781,-8.12781,0 0|0:25:2,1,0,0,22:2:70:1,0,0,22:35,0,0,743:-29.8697,-30.2373,-30.3152,-30.4718,-30.6163,-30.8514,-30.4718,-30.6163,-30.8514,-30.8514,-6.23869,-6.38239,-6.62266,-6.62266,0 dDocent_Contig_10159 144 . G A 207.19 . AB=0.666667;ABP=3.73412;AC=3;AF=0.25;AN=12;AO=10;CIGAR=1X;DP=168;DPB=168;DPRA=0.635135;EPP=24.725;EPPR=346.103;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.962025;PAO=0;PQA=0;PQR=0;PRO=0;QA=393;QR=6103;RO=158;RPL=0;RPP=24.725;RPPR=346.103;RPR=10;RUN=1;SAF=0;SAP=24.725;SAR=10;SRF=0;SRP=346.103;SRR=158;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:1133:0:0:0,-8.72987,-102.256 0/0:54:52,2:52:2044:2:70:0,-9.6094,-177.506 0/0:45:45,0:45:1717:0:0:0,-13.5463,-154.76 0/0:33:31,2:31:1169:2:78:0,-2.53069,-98.0823 1/1:4:0,4:0:0:4:163:-15.0584,-1.20412,0 0/1:3:1,2:1:40:2:82:-6.87659,0,-3.09259 dDocent_Contig_10160 15 . G A 312.755 . AB=0.207317;ABP=64.0234;AC=4;AF=0.333333;AN=12;AO=17;CIGAR=1X;DP=143;DPB=143;DPRA=0.672131;EPP=39.9253;EPPR=276.616;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.984127;PAO=0;PQA=0;PQR=0;PRO=0;QA=684;QR=5020;RO=126;RPL=0;RPP=39.9253;RPPR=276.616;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=126;SRP=276.616;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:19,4:19:752:4:155:-7.40121,0,-61.0777 0/1:43:39,4:39:1545:4:163:-2.11414,0,-126.346 0/0:24:24,0:24:943:0:0:0,-7.22472,-85.1723 0/0:37:37,0:37:1494:0:0:0,-11.1381,-134.702 0/1:10:2,8:2:81:8:325:-26.6093,0,-4.67543 0/1:6:5,1:5:205:1:41:-2.28839,0,-17.0288 dDocent_Contig_10161 12 . C T 1856.35 . AB=0.208333;ABP=20.744;AC=0;AF=0;AN=12;AO=5;CIGAR=1X3M1X;DP=207;DPB=207;DPRA=0;EPP=13.8677;EPPR=215.815;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=199;QR=3749;RO=98;RPL=0;RPP=13.8677;RPPR=215.815;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=98;SRP=215.815;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:41:30,0,2,0,7:30:1163:0,2,0,7:0,81,0,272:-13.3082,-22.3391,-117.871,-15.6578,-111.191,-110.589,-22.3391,-117.871,-111.191,-117.871,0,-95.5198,-88.8397,-95.5198,-93.4126 0|0:47:15,5,2,0,25:15:581:5,2,0,25:203,81,0,934:-71.9285,-59.6969,-105.924,-69.7632,-100.749,-116.892,-76.444,-107.429,-117.494,-124.175,0,-30.9699,-41.0357,-47.716,-40.1902 0|0:33:22,0,0,0,10:22:789:0,0,0,10:0,0,0,388:-25.2803,-31.903,-96.2233,-31.903,-96.2233,-96.2233,-31.903,-96.2233,-96.2233,-96.2233,0,-64.3368,-64.3368,-64.3368,-61.3265 0|0:50:23,4,8,0,14:23:899:4,8,0,14:148,320,0,512:-34.894,-29.7129,-102.421,-15.4481,-77.2616,-86.9583,-41.8176,-103.625,-89.3665,-115.73,0,-61.8028,-47.5434,-73.9063,-69.6918 0|0:12:2,4,0,0,6:2:80:4,0,0,6:159,0,0,228:-24.5832,-12.0872,-17.4782,-25.1853,-18.6823,-31.7776,-25.1853,-18.6823,-31.7776,-31.7776,-6.49848,0,-13.0895,-13.0895,-11.2833 0|0:24:6,4,0,5,9:6:237:4,0,5,9:157,0,199,349:-26.863,-15.7567,-34.0554,-28.6692,-35.2596,-48.1718,-12.2805,-18.8715,-31.7842,-30.279,0,-6.59036,-19.5016,-3.11407,-16.7923 dDocent_Contig_10162 12 . A G 60.034 . AB=0.135417;ABP=113.846;AC=1;AF=0.0833333;AN=12;AO=50;CIGAR=1X;DP=745;DPB=745;DPRA=0;EPP=111.584;EPPR=1512.18;GTI=0;LEN=1;MEANALT=1;MQM=31.38;MQMR=44.1295;NS=6;NUMALT=1;ODDS=0;PAIRED=0.52;PAIREDR=0.817266;PAO=0;PQA=0;PQR=0;PRO=0;QA=1984;QR=27529;RO=695;RPL=0;RPP=111.584;RPPR=1512.18;RPR=50;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=695;SRP=1512.18;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:103:92,11:92:3606:11:443:0,-11.5796,-271.652 0/0:164:159,5:159:6298:5:193:0,-35.9598,-471.909 0/0:128:123,5:123:4894:5:199:0,-28.6096,-361.721 0/0:145:139,6:139:5463:6:241:0,-29.507,-407.807 0/1:96:83,13:83:3319:13:510:-7.52628,0,-236.855 0/0:109:99,10:99:3949:10:398:0,-12.8049,-289.648 dDocent_Contig_10163 37 . T A 11118.1 . AB=0.598985;ABP=36.5414;AC=8;AF=0.666667;AN=12;AO=347;CIGAR=1X;DP=506;DPB=506;DPRA=0;EPP=756.511;EPPR=346.103;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13785;QR=6268;RO=158;RPL=0;RPP=756.511;RPPR=346.103;RPR=347;RUN=1;SAF=347;SAP=756.511;SAR=0;SRF=158;SRP=346.103;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:7,28:7:286:28:1117:-90.2796,0,-15.5788 0/1:53:17,36:17:686:36:1416:-111.741,0,-46.1147 1/1:68:0,68:0:0:68:2722:-245.092,-20.47,0 0/1:125:22,103:22:878:103:4045:-326.407,0,-41.6976 0/1:181:111,69:111:4377:69:2774:-195.397,0,-339.512 1/1:44:1,43:1:41:43:1711:-150.118,-9.15075,0 dDocent_Contig_10164 7 . T A 401.646 . AB=0.833333;ABP=14.5915;AC=3;AF=0.25;AN=12;AO=13;CIGAR=3X;DP=61;DPB=61;DPRA=0.652174;EPP=31.2394;EPPR=107.241;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.979167;PAO=0;PQA=0;PQR=0;PRO=0;QA=492;QR=1802;RO=48;RPL=0;RPP=31.2394;RPPR=107.241;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=48;SRP=107.241;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:12:12,0:12:440:0:0:0,-3.61236,-39.9406 0|0:14:14,0:14:526:0:0:0,-4.21442,-47.6827 0|0:12:12,0:12:456:0:0:0,-3.61236,-41.3885 0|0:8:8,0:8:302:0:0:0,-2.40824,-27.5373 1|1:3:0,3:0:0:3:111:-10.3532,-0.90309,0 0|1:12:2,10:2:78:10:381:-31.0319,0,-3.79111 dDocent_Contig_10165 8 . T G 5699.15 . AB=0.60804;ABP=23.1864;AC=8;AF=0.666666;AN=12;AO=176;CIGAR=1X2M;DP=256;DPB=256;DPRA=0;EPP=376.553;EPPR=152.842;GTI=0;LEN=1;MEANALT=1.33333;MQM=59.858;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.994318;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6743;QR=2657;RO=69;RPL=0;RPP=385.189;RPPR=152.842;RPR=176;RUN=1;SAF=175;SAP=376.553;SAR=1;SRF=69;SRP=152.842;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:41:30,0,11:30:1147:0,11:0,402:-24.1776,-33.2085,-127.333,0,-94.4942,-91.1829 0|1:30:7,0,23:7:271:0,23:0,885:-70.6675,-72.7747,-95.038,0,-22.6492,-15.7255 0|1:18:11,0,7:11:425:0,7:0,273:-19.5195,-22.8308,-57.7357,0,-35.2931,-33.1859 0|1:58:21,0,37:21:814:0,37:0,1417:-110.35,-116.672,-183.549,0,-67.2634,-56.1253 1|1:52:0,9,43:0:0:9,43:345,1642:-163.417,-135.101,-132.392,-28.6987,0,-15.7544 1|1:57:0,2,55:0:0:2,55:76,2124:-191.005,-184.773,-184.17,-16.5567,-9.9439,0 dDocent_Contig_10166 83 . T G 41.0696 . AB=0.12;ABP=34.3664;AC=0;AF=0;AN=10;AO=4;CIGAR=1X2M1X;DP=66;DPB=66;DPRA=2.16667;EPP=11.6962;EPPR=128.956;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=5;NUMALT=2;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=134;QR=1888;RO=58;RPL=4;RPP=11.6962;RPPR=128.956;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=58;SRP=128.956;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:14:13,1,0:13:425:1,0:34,0:0,-0.815509,-35.166,-3.91339,-35.467,-38.2259 0|0:10:10,0,0:10:323:0,0:0,0:0,-3.0103,-29.383,-3.0103,-29.383,-29.383 0|0:15:15,0,0:15:488:0,0:0,0:0,-4.51545,-44.2303,-4.51545,-44.2303,-44.2303 0|0:25:18,3,4:18:585:3,4:100,137:-5.70834,-3.03647,-49.3343,0,-39.1126,-46.004 .:.:.:.:.:.:.:. 0|0:2:2,0,0:2:67:0,0:0,0:0,-0.60206,-6.36314,-0.60206,-6.36314,-6.36314 dDocent_Contig_10167 26 . T C 902.388 . AB=0.470588;ABP=3.52123;AC=4;AF=0.333333;AN=12;AO=32;CIGAR=1X;DP=83;DPB=83;DPRA=2.26667;EPP=72.4974;EPPR=113.755;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1294;QR=1984;RO=51;RPL=0;RPP=72.4974;RPPR=113.755;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=51;SRP=113.755;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:250:0:0:0,-2.10721,-22.8318 0/1:9:7,2:7:270:2:80:-4.8823,0,-21.9538 0/1:24:15,9:15:593:9:360:-25.5389,0,-46.4792 0/1:12:5,7:5:202:7:284:-22.3211,0,-14.9491 0/0:8:8,0:8:321:0:0:0,-2.40824,-29.2575 0/1:23:9,14:9:348:14:570:-44.7183,0,-24.7509 dDocent_Contig_10168 48 . T G 5169.39 . AB=0.408602;ABP=9.75821;AC=2;AF=0.166667;AN=12;AO=38;CIGAR=1M15D2M1X1M1X;DP=278;DPB=250.81;DPRA=1.38806;EPP=85.5263;EPPR=215.815;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1486;QR=3814;RO=98;RPL=0;RPP=85.5263;RPPR=215.815;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=98;SRP=215.815;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:39:17,19,3:17:636:19,3:746,105:-56.2715,0,-46.3757,-52.8568,-43.5609,-104.02 0|1:54:25,19,7:25:976:19,7:740,273:-53.3282,0,-74.5558,-38.4097,-57.8336,-116.55 0|0:73:23,0,50:23:911:0,50:0,2010:-159.105,-166.029,-241.01,0,-75.3789,-60.3274 0|0:45:31,0,13:31:1214:0,13:0,517:-33.3785,-42.7104,-142.538,0,-99.9709,-96.0575 0|0:37:2,0,34:2:77:0,34:0,1363:-115.637,-116.239,-122.56,-3.87641,-10.235,0 0|0:30:0,0,29:0:0:0,29:0,1184:-106.44,-106.44,-106.44,-8.72987,-8.72987,0 dDocent_Contig_10169 69 . A G 1879.55 . AB=0.357895;ABP=36.3367;AC=5;AF=0.416667;AN=12;AO=68;CIGAR=1M1X1M;DP=212;DPB=216;DPRA=0;EPP=150.67;EPPR=289.645;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.705882;PAIREDR=0.856061;PAO=0;PQA=0;PQR=0;PRO=0;QA=2610;QR=5052;RO=132;RPL=68;RPP=150.67;RPPR=289.645;RPR=0;RUN=1;SAF=68;SAP=150.67;SAR=0;SRF=132;SRP=289.645;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:22:15,7,0:15:570:7,0:281,0:-19.0399,0,-45.0135,-23.5553,-47.1207,-70.2819 0|1:30:22,2,6:22:856:2,6:76,238:-12.9812,-13.375,-83.1112,0,-64.1201,-68.5462 0|1:15:6,0,9:6:225:0,9:0,330:-25.52,-27.3262,-45.7566,0,-18.8018,-16.0925 0|1:64:48,3,13:48:1798:3,13:111,492:-25.8868,-31.258,-177.584,0,-138.157,-143.323 0|1:41:23,0,18:23:897:0,18:0,704:-51.3445,-58.2682,-131.992,0,-74.1144,-68.6959 0|1:40:18,0,22:18:706:0,22:0,846:-64.4042,-69.8228,-127.885,0,-58.4506,-51.8279 dDocent_Contig_10170 107 . N G 133.114 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=137;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:103:-9.61002,-0.90309,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 dDocent_Contig_10171 54 . A C 57.5923 . AB=0.16;ABP=28.1125;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=107;DPB=107;DPRA=1.18367;EPP=16.0391;EPPR=222.329;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=224;QR=3991;RO=101;RPL=6;RPP=16.0391;RPPR=222.329;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=101;SRP=222.329;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:21,4:21:844:4:157:-6.98067,0,-68.7478 0/0:27:27,0:27:1067:0:0:0,-8.12781,-96.3187 0/0:18:17,1:17:645:1:41:0,-1.32397,-54.2708 0/0:21:21,0:21:834:0:0:0,-6.32163,-75.3731 0/0:15:14,1:14:561:1:26:0,-1.91562,-48.2333 0/0:1:1,0:1:40:0:0:0,-0.30103,-3.99568 dDocent_Contig_10172 12 . T C 146.807 . AB=0.1125;ABP=211.689;AC=2;AF=0.166667;AN=12;AO=30;CIGAR=1X;DP=712;DPB=712;DPRA=0;EPP=68.1545;EPPR=1483.95;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997067;PAO=0;PQA=0;PQR=0;PRO=0;QA=1206;QR=27502;RO=682;RPL=0;RPP=68.1545;RPPR=1483.95;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=682;SRP=1483.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:70:63,7:63:2537:7:284:-4.86169,0,-207.385 0/0:57:55,2:55:2202:2:82:0,-9.37903,-190.565 0/0:44:43,1:43:1730:1:41:0,-9.15075,-151.822 0/1:90:79,11:79:3205:11:442:-13.0408,0,-261.405 0/0:187:179,8:179:7233:8:316:0,-27.487,-621.774 0/0:264:263,1:263:10595:1:41:0,-75.3773,-948.687 dDocent_Contig_10173 21 . G C 242.09 . AB=0.285714;ABP=16.9698;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=252;DPB=252;DPRA=0.863636;EPP=29.068;EPPR=524.164;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.166667;PAIREDR=0.3875;PAO=0;PQA=0;PQR=0;PRO=0;QA=480;QR=9427;RO=240;RPL=0;RPP=29.068;RPPR=524.164;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=240;SRP=524.164;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1074:0:0:0,-8.12781,-96.9527 0/0:73:73,0:73:2796:0:0:0,-21.9752,-251.761 0/0:36:36,0:36:1444:0:0:0,-10.8371,-130.213 0/0:40:40,0:40:1584:0:0:0,-12.0412,-142.8 0/1:35:25,10:25:974:10:399:-25.7319,0,-77.4228 0/0:41:39,2:39:1555:2:81:0,-4.6565,-132.503 dDocent_Contig_10174 81 . T C 2755.5 . AB=0.05;ABP=73.366;AC=0;AF=0;AN=12;AO=2;CIGAR=1X2M1X;DP=283;DPB=283;DPRA=0;EPP=7.35324;EPPR=328.731;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.86;PAO=0;PQA=0;PQR=0;PRO=0;QA=70;QR=5100;RO=150;RPL=2;RPP=7.35324;RPPR=328.731;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=150;SRP=328.731;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:45:26,0,19,0:26:873:0,19,0:0,662,0:-46.3593,-54.186,-124.894,0,-71.0508,-65.3312,-54.186,-124.894,-71.0508,-124.894 0|0:41:16,0,25,0:16:543:0,25,0:0,850,0:-64.4709,-69.2873,-113.324,0,-44.3761,-36.8504,-69.2873,-113.324,-44.3761,-113.324 0|0:40:17,2,20,0:17:586:2,20,0:70,698,0:-51.6569,-51.0788,-98.0784,0,-41.9031,-41.5785,-56.7744,-98.6804,-47.5991,-104.376 0|0:50:30,0,20,0:30:1021:0,20,0:0,674,0:-45.9237,-54.9546,-137.784,0,-83.1671,-77.1465,-54.9546,-137.784,-83.1671,-137.784 0|0:54:35,0,3,16:35:1182:0,3,16:0,104,551:-34.2176,-44.7537,-140.558,-36.2998,-132.104,-131.201,0,-95.8004,-87.3463,-90.9839 0|0:53:26,0,19,7:26:895:0,19,7:0,641,240:-44.1435,-51.9703,-124.672,0,-72.7216,-67.002,-32.4802,-105.186,-53.2346,-103.079 dDocent_Contig_10175 33 . G C 372.98 . AB=0;ABP=0;AC=2;AF=0.2;AN=10;AO=10;CIGAR=1X;DP=128;DPB=128;DPRA=0.338983;EPP=24.725;EPPR=259.244;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=406;QR=4643;RO=118;RPL=0;RPP=24.725;RPPR=259.244;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=118;SRP=259.244;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:837:0:0:0,-6.32163,-75.6442 0/0:18:18,0:18:703:0:0:0,-5.41854,-63.5898 0/0:37:37,0:37:1433:0:0:0,-11.1381,-129.215 0/0:42:42,0:42:1670:0:0:0,-12.6433,-150.531 ./.:.:.:.:.:.:.:. 1/1:10:0,10:0:0:10:406:-36.9,-3.0103,0 dDocent_Contig_10176 98 . N C 582.682 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=19;CIGAR=3X;DP=19;DPB=21.6667;DPRA=0;EPP=44.2683;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=4;PQA=139;PQR=0;PRO=0;QA=629;QR=0;RO=0;RPL=19;RPP=44.2683;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=44.2683;SAR=19;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:3:0,3:0:0:3:99:-8.89565,-0.90309,0 .:.:.:.:.:.:.:. 1|1:6:0,6:0:0:6:199:-18.2366,-1.80618,0 1|1:4:0,4:0:0:4:135:-12.1413,-1.20412,0 1|1:4:0,4:0:0:4:128:-11.8373,-1.20412,0 1|1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 dDocent_Contig_10177 209 . N G 64.5879 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=68;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:68:-6.45771,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10179 1 . N G 111.879 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=120;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:120:-11.1873,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10180 10 . A T 1669.21 . AB=0.403974;ABP=15.1044;AC=2;AF=0.166667;AN=12;AO=62;CIGAR=1X1M1X;DP=161;DPB=164.333;DPRA=3.37778;EPP=137.642;EPPR=89.8692;GTI=0;LEN=1;MEANALT=2;MQM=15.2097;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2368;QR=1532;RO=40;RPL=0;RPP=137.642;RPPR=89.8692;RPR=62;RUN=1;SAF=62;SAP=137.642;SAR=0;SRF=40;SRP=89.8692;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:19:7,2,1,9:7:262:2,1,9:77,37,339:-25.8034,-26.4883,-47.3405,-24.8802,-44.9159,-46.0517,0,-20.1628,-18.5445,-18.8676 0|0:36:10,10,0,16:10:384:10,0,16:382,0,612:-47.329,-41.22,-69.7326,-50.3393,-72.7429,-81.8883,0,-22.5561,-31.6462,-26.8297 0|0:58:12,30,0,16:12:458:30,0,16:1139,0,606:-46.146,-16.3684,-44.913,-49.7583,-53.9439,-87.363,0,-4.26401,-37.6382,-32.8217 0|0:38:11,19,0,8:11:428:19,0,8:732,0,312:-22.4068,-5.98851,-35.4437,-25.7181,-41.1633,-60.942,0,-15.5159,-35.2629,-32.8547 0|0:9:0,0,9,0:0:0:0,9,0:0,340,0:-30.9523,-30.9523,-30.9523,-2.70927,-2.70927,0,-30.9523,-30.9523,-2.70927,-30.9523 1|1:1:0,1,0,0:0:0:1,0,0:38,0,0:-1.4979,-0.30103,0,-1.4979,-0.30103,-1.4979,-1.4979,-0.30103,-1.4979,-1.4979 dDocent_Contig_10181 7 . T C 55.6538 . AB=0.116667;ABP=79.5909;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=204;DPB=204;DPRA=0.728814;EPP=20.3821;EPPR=428.619;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.875;PAIREDR=0.816327;PAO=0;PQA=0;PQR=0;PRO=0;QA=309;QR=7516;RO=196;RPL=0;RPP=20.3821;RPPR=428.619;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=196;SRP=428.619;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:32,5:32:1211:5:195:-6.78609,0,-98.146 0/1:23:21,2:21:811:2:75:-0.196654,0,-66.3916 0/0:21:21,0:21:815:0:0:0,-6.32163,-73.6754 0/0:26:25,1:25:966:1:39:0,-3.93022,-83.3572 0/0:43:43,0:43:1628:0:0:0,-12.9443,-146.788 0/0:54:54,0:54:2085:0:0:0,-16.2556,-187.879 dDocent_Contig_10182 38 . C T 818.012 . AB=0.179104;ABP=62.9365;AC=8;AF=0.666667;AN=12;AO=12;CIGAR=1X2M;DP=99;DPB=99;DPRA=4.1875;EPP=29.068;EPPR=135.47;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=480;QR=2398;RO=61;RPL=0;RPP=29.068;RPPR=135.47;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=61;SRP=135.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:13:7,5,1:7:272:5,1:195,40:-13.9135,0,-20.8337,-12.7239,-19.0424,-34.7709 0|1:23:17,4,2:17:660:4,2:148,78:-6.97396,0,-53.0207,-5.67373,-47.8135,-59.3127 0|1:25:17,1,7:17:686:1,7:40,282:-18.128,-19.9507,-76.1993,0,-53.2575,-54.4452 0|1:28:19,9,0:19:741:9,0:359,0:-24.2448,0,-58.5836,-29.9644,-61.2929,-90.8617 1|1:4:0,4,0:0:0:4,0:161,0:-14.8755,-1.20412,0,-14.8755,-1.20412,-14.8755 1|1:6:1,3,2:1:39:3,2:119,80:-12.8872,-3.3942,-5.69368,-6.59677,0,-9.19894 dDocent_Contig_10183 22 . A T 175.826 . AB=0.126984;ABP=155.289;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=564;DPB=564;DPRA=1.43836;EPP=37.7539;EPPR=1184.31;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9015;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.886861;PAO=0;PQA=0;PQR=0;PRO=0;QA=630;QR=21500;RO=548;RPL=0;RPP=37.7539;RPPR=1192.98;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=547;SRP=1184.31;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:66:66,0:66:2615:0:0:0,-19.868,-235.491 0/0:114:114,0:114:4491:0:0:0,-34.3174,-403.593 0/0:84:84,0:84:3321:0:0:0,-25.2865,-298.96 0/0:92:92,0:92:3596:0:0:0,-27.6948,-323.682 0/0:82:82,0:82:3191:0:0:0,-24.6845,-287.279 0/1:126:110,16:110:4286:16:630:-19.1055,0,-347.787 dDocent_Contig_10185 20 . A G 2544.67 . AB=0.431925;ABP=11.584;AC=6;AF=0.5;AN=12;AO=92;CIGAR=1X;DP=213;DPB=213;DPRA=0;EPP=202.786;EPPR=265.758;GTI=0;LEN=1;MEANALT=1;MQM=56.0109;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.532609;PAIREDR=0.68595;PAO=0;PQA=0;PQR=0;PRO=0;QA=3662;QR=4811;RO=121;RPL=0;RPP=202.786;RPPR=265.758;RPR=92;RUN=1;SAF=92;SAP=202.786;SAR=0;SRF=121;SRP=265.758;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:18,15:18:730:15:594:-43.0003,0,-56.0903 0/1:32:15,17:15:609:17:674:-51.0621,0,-45.5152 0/1:29:10,19:10:390:19:761:-59.8914,0,-26.7204 0/1:27:15,12:15:601:12:473:-34.4403,0,-46.2992 0/1:48:33,15:33:1329:15:595:-39.4359,0,-105.421 0/1:44:30,14:30:1152:14:565:-37.8593,0,-90.6994 dDocent_Contig_10188 11 . C A 522.061 . AB=0.227273;ABP=74.0767;AC=2;AF=0.166667;AN=12;AO=25;CIGAR=1X;DP=300;DPB=300;DPRA=1.15789;EPP=57.2971;EPPR=600.165;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.963636;PAO=0;PQA=0;PQR=0;PRO=0;QA=976;QR=11035;RO=275;RPL=0;RPP=57.2971;RPPR=600.165;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=275;SRP=600.165;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:47:47,0:47:1880:0:0:0,-14.1484,-169.403 0/0:53:53,0:53:2123:0:0:0,-15.9546,-191.243 0/0:36:36,0:36:1447:0:0:0,-10.8371,-130.48 0/0:54:54,0:54:2173:0:0:0,-16.2556,-195.741 0/1:62:53,9:53:2121:9:359:-14.0098,0,-172.397 0/1:48:32,16:32:1291:16:617:-41.4181,0,-102.007 dDocent_Contig_10189 105 . N T 502.762 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=16;CIGAR=3X;DP=16;DPB=16;DPRA=0;EPP=37.7539;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=548;QR=0;RO=0;RPL=0;RPP=37.7539;RPPR=0;RPR=16;RUN=1;SAF=0;SAP=37.7539;SAR=16;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:3:0,3:0:0:3:98:-9.14405,-0.90309,0 .:.:.:.:.:.:.:. 1|1:13:0,13:0:0:13:450:-40.8309,-3.91339,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_10190 47 . C G 9800.09 . AB=0;ABP=0;AC=4;AF=0.333333;AN=12;AO=290;CIGAR=1X;DP=780;DPB=780;DPRA=1.02941;EPP=606.949;EPPR=1004.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.931034;PAIREDR=0.869121;PAO=0;PQA=0;PQR=0;PRO=0;QA=11271;QR=19181;RO=489;RPL=3;RPP=606.949;RPPR=1004.93;RPR=287;RUN=1;SAF=290;SAP=632.737;SAR=0;SRF=489;SRP=1064.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:116:111,5:111:4300:5:192:0,-17.2715,-369.323 0/0:125:122,3:122:4835:3:107:0,-27.6478,-425.088 0/0:84:84,0:84:3286:0:0:0,-25.2865,-295.796 0/0:171:170,0:170:6680:0:0:0,-51.1751,-600.79 1/1:124:1,123:1:39:123:4755:-424.002,-33.4312,0 1/1:160:1,159:1:41:159:6217:-555.228,-44.0702,0 dDocent_Contig_10191 16 . C T 51.6239 . AB=0.115385;ABP=69.8248;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=235;DPB=235;DPRA=2.4375;EPP=22.5536;EPPR=493.763;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.777778;PAIREDR=0.960177;PAO=0;PQA=0;PQR=0;PRO=0;QA=366;QR=9042;RO=226;RPL=0;RPP=22.5536;RPPR=493.763;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=226;SRP=493.763;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:886:0:0:0,-6.62266,-80.0478 0/0:48:47,1:47:1884:1:41:0,-10.3549,-165.662 0/0:18:18,0:18:695:0:0:0,-5.41854,-62.868 0/0:45:44,1:44:1774:1:40:0,-9.55067,-155.876 0/1:52:46,6:46:1830:6:244:-6.68527,0,-149.249 0/0:50:49,1:49:1973:1:41:0,-10.9569,-173.661 dDocent_Contig_10192 50 . T G 1851.78 . AB=0.382022;ABP=24.5298;AC=4;AF=0.333333;AN=12;AO=69;CIGAR=11M1X4M;DP=251;DPB=244.875;DPRA=2.58889;EPP=152.842;EPPR=378.675;GTI=0;LEN=1;MEANALT=1.8;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.959538;PAO=0;PQA=0;PQR=0;PRO=0;QA=2752;QR=6679;RO=173;RPL=0;RPP=152.842;RPPR=378.675;RPR=69;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=173;SRP=378.675;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:55:51,3,1:51:1950:3,1:88,41:0,-8.42412,-167.494,-11.9394,-165.012,-171.722 0|1:32:10,3,19:10:386:3,19:72,759:-59.6375,-57.0939,-87.8865,0,-26.2704,-26.0928 0|1:43:16,0,27:16:611:0,27:0,1072:-83.8212,-88.6377,-138.758,0,-50.5077,-42.3799 0|1:72:52,0,19:52:2020:0,19:0,759:-46.8692,-62.5228,-228.498,0,-165.981,-160.261 0|0:18:17,1,0:17:661:1,0:34,0:0,-2.01963,-56.4273,-5.11751,-56.7283,-59.4836 0|1:31:27,0,3:27:1051:0,3:0,121:-2.00587,-10.1337,-96.5451,0,-86.569,-85.6659 dDocent_Contig_10193 38 . G A 214.016 . AB=0.111111;ABP=357.684;AC=3;AF=0.25;AN=12;AO=38;CIGAR=1X;DP=465;DPB=465;DPRA=1.12857;EPP=85.5263;EPPR=930.229;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8712;NS=6;NUMALT=1;ODDS=0;PAIRED=0.368421;PAIREDR=0.955504;PAO=0;PQA=0;PQR=0;PRO=0;QA=1506;QR=16907;RO=427;RPL=0;RPP=85.5263;RPPR=930.229;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=427;SRP=930.229;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:55:52,3:52:2040:3:121:0,-5.27666,-172.522 0/1:113:103,10:103:4066:10:398:-2.16295,0,-331.928 0/1:83:70,13:70:2780:13:521:-22.2525,0,-225.337 0/0:70:65,5:65:2588:5:199:0,-2.78374,-214.772 0/0:70:70,0:70:2774:0:0:0,-21.0721,-249.782 0/1:74:67,7:67:2659:7:267:-2.11364,0,-214.024 dDocent_Contig_10194 7 . T C 33.7883 . AB=0.129032;ABP=40.0654;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=183;DPB=183;DPRA=2.45161;EPP=20.3821;EPPR=383.018;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.25;PAIREDR=0.531429;PAO=0;PQA=0;PQR=0;PRO=0;QA=294;QR=6709;RO=175;RPL=0;RPP=20.3821;RPPR=383.018;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=175;SRP=383.018;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:343:0:0:0,-2.70927,-31.2275 0/0:22:22,0:22:832:0:0:0,-6.62266,-75.2024 0/0:43:42,1:42:1623:1:23:0,-10.6444,-144.033 0/0:35:34,1:34:1307:1:39:0,-6.63949,-114.021 0/1:31:27,4:27:1035:4:154:-4.90153,0,-84.126 0/0:43:41,2:41:1569:2:78:0,-5.54082,-134.078 dDocent_Contig_10195 11 . A T 312.815 . AB=0.375;ABP=7.35324;AC=2;AF=0.25;AN=8;AO=12;CIGAR=1X;DP=72;DPB=72;DPRA=0.8;EPP=29.068;EPPR=133.299;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.983333;PAO=0;PQA=0;PQR=0;PRO=0;QA=484;QR=2397;RO=60;RPL=0;RPP=29.068;RPPR=133.299;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=60;SRP=133.299;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:398:0:0:0,-3.0103,-36.1783 0/1:18:10,8:10:391:8:323:-24.0189,0,-30.1249 0/1:14:10,4:10:390:4:161:-10.6605,0,-31.2403 0/0:30:30,0:30:1218:0:0:0,-9.0309,-109.89 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10197 35 . C T 2951.32 . AB=0.515;ABP=3.40116;AC=6;AF=0.5;AN=12;AO=103;CIGAR=1X;DP=200;DPB=200;DPRA=0;EPP=226.672;EPPR=213.643;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4051;QR=3916;RO=97;RPL=0;RPP=226.672;RPPR=213.643;RPR=103;RUN=1;SAF=103;SAP=226.672;SAR=0;SRF=97;SRP=213.643;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:44:16,28:16:644:28:1119:-87.7476,0,-45.0483 0/1:43:10,33:10:406:33:1248:-99.6423,0,-23.9561 0/1:13:6,7:6:243:7:277:-21.384,0,-18.3346 0/1:40:30,10:30:1211:10:399:-24.2238,0,-97.2226 0/1:45:30,15:30:1210:15:603:-41.0607,0,-95.6246 0/1:15:5,10:5:202:10:405:-32.295,0,-14.0464 dDocent_Contig_10198 73 . A G 115.432 . AB=0.2;ABP=38.1882;AC=2;AF=0.2;AN=10;AO=14;CIGAR=10M1I1X8M;DP=130;DPB=131.053;DPRA=10.5833;EPP=33.4109;EPPR=224.5;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=5;NUMALT=2;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=458;QR=3475;RO=102;RPL=14;RPP=33.4109;RPPR=224.5;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=102;SRP=224.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:15:11,4,0:11:379:4,0:129,0:-7.41403,0,-29.9262,-10.7254,-31.1303,-41.5274 0|0:51:40,4,3:40:1369:4,3:121,114:0,-2.36934,-112.296,-2.6706,-104.148,-112.925 0|0:31:26,1,2:26:876:1,2:35,81:0,-4.97651,-75.6597,-1.10444,-69.2767,-71.523 0|1:30:22,5,3:22:750:5,3:173,107:-7.42993,0,-59.3323,-5.32821,-52.1152,-65.2722 .:.:.:.:.:.:.:. 0|0:3:3,0,0:3:101:0,0:0,0:0,-0.90309,-9.42337,-0.90309,-9.42337,-9.42337 dDocent_Contig_10200 8 . T G 631.434 . AB=0.186869;ABP=171.639;AC=4;AF=0.333333;AN=12;AO=38;CIGAR=1X;DP=330;DPB=330;DPRA=1.12;EPP=85.5263;EPPR=637.08;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.863;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.947368;PAIREDR=0.921233;PAO=0;PQA=0;PQR=0;PRO=0;QA=1467;QR=11253;RO=292;RPL=0;RPP=85.5263;RPPR=637.08;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=292;SRP=637.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:35,7:35:1352:7:273:-12.2948,0,-109.321 0/1:50:45,5:45:1725:5:195:-2.8727,0,-140.455 0/1:51:43,8:43:1662:8:311:-13.0018,0,-134.462 0/1:55:38,17:38:1467:17:649:-42.1864,0,-115.749 0/0:50:50,0:50:1916:0:0:0,-15.0515,-172.682 0/0:82:81,1:81:3131:1:39:0,-20.7879,-278.018 dDocent_Contig_10201 18 . C A 52.8774 . AB=0.230769;ABP=11.1951;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=2M1X4M;DP=137;DPB=134.143;DPRA=0.524194;EPP=9.52472;EPPR=280.959;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=115;QR=4957;RO=128;RPL=0;RPP=9.52472;RPPR=280.959;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=128;SRP=280.959;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:9:9,0,0:9:352:0,0:0,0:0,-2.70927,-32.0411,-2.70927,-32.0411,-32.0411 0|0:21:20,0,0:20:781:0,0:0,0:0,-6.0206,-70.1998,-6.0206,-70.1998,-70.1998 0|0:22:22,0,0:22:839:0,0:0,0:0,-6.62266,-75.8239,-6.62266,-75.8239,-75.8239 0|1:13:10,0,3:10:383:0,3:0,115:-6.8106,-9.8209,-41.2502,0,-31.8122,-30.9091 0|0:37:33,3,0:33:1274:3,0:102,0:0,-1.71391,-105.409,-9.93399,-106.312,-114.58 0|0:35:34,1,0:34:1328:1,0:37,0:0,-6.83822,-116.099,-10.235,-116.4,-119.427 dDocent_Contig_10202 106 . N A 43.2086 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=2X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=23;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=70;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:70:-4.31976,-0.60206,0 dDocent_Contig_10204 16 . T C 6678.84 . AB=0.718062;ABP=96.7663;AC=7;AF=0.583333;AN=12;AO=211;CIGAR=1X;DP=279;DPB=279;DPRA=0;EPP=461.191;EPPR=150.67;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.563981;PAIREDR=0.602941;PAO=0;PQA=0;PQR=0;PRO=0;QA=8429;QR=2713;RO=68;RPL=0;RPP=461.191;RPPR=150.67;RPR=211;RUN=1;SAF=211;SAP=461.191;SAR=0;SRF=68;SRP=150.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:52:4,48:4:160:48:1915:-157.768,-0.870134,0 0/1:62:15,47:15:610:47:1849:-147.95,0,-36.574 0/1:19:2,17:2:81:17:684:-56.1695,0,-1.96616 0/1:58:21,37:21:805:37:1490:-116.882,0,-55.2953 0/1:32:9,23:9:365:23:931:-74.4603,0,-23.5819 0/1:56:17,39:17:692:39:1560:-123.78,0,-45.7507 dDocent_Contig_10205 15 . T A 11474 . AB=0.142857;ABP=10.7656;AC=5;AF=0.416667;AN=12;AO=296;CIGAR=1M1X5M;DP=405;DPB=368.571;DPRA=0;EPP=645.766;EPPR=128.956;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11711;QR=2282;RO=58;RPL=0;RPP=645.766;RPPR=128.956;RPR=296;RUN=1;SAF=296;SAP=645.766;SAR=0;SRF=58;SRP=128.956;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:50:28,22,0:28:1106:22,0:846,0:-61.4036,0,-84.7809,-69.8324,-91.4036,-160.847 0|1:7:0,6,1:0:0:6,1:214,41:-21.1847,-3.79354,-1.98736,-17.7931,0,-17.492 0|0:14:9,5,0:9:349:5,0:190,0:-13.2503,0,-27.5529,-15.9596,-29.058,-44.6352 0|0:27:9,18,0:9:349:18,0:666,0:-52.1352,0,-23.6365,-54.8445,-29.055,-83.518 1|1:170:12,0,158:12:478:0,158:0,6270:-520.709,-524.321,-563.683,-7.80313,-47.5627,0 1|1:137:0,0,137:0:0:0,137:0,5400:-485.865,-485.865,-485.865,-41.2411,-41.2411,0 dDocent_Contig_10206 82 . T C 2097.74 . AB=0.4;ABP=20.3821;AC=3;AF=0.25;AN=12;AO=87;CIGAR=1X;DP=408;DPB=408;DPRA=1.53617;EPP=191.928;EPPR=700.053;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.643678;PAIREDR=0.367601;PAO=0;PQA=0;PQR=0;PRO=0;QA=3312;QR=12143;RO=321;RPL=28;RPP=26.9963;RPPR=165.532;RPR=59;RUN=1;SAF=28;SAP=26.9963;SAR=59;SRF=83;SRP=165.532;SRR=238;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:79:69,10:69:2621:10:389:-11.5821,0,-212.253 0/1:48:32,16:32:1170:16:584:-38.4321,0,-91.1304 0/1:73:19,54:19:728:54:2075:-164.982,0,-43.8669 0/0:123:117,6:117:4525:6:223:0,-16.6018,-386.8 0/0:38:37,1:37:1393:1:41:0,-7.34457,-121.528 0/0:47:47,0:47:1706:0:0:0,-14.1484,-153.796 dDocent_Contig_10207 9 . G A 153.99 . AB=0.242424;ABP=22.0271;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=109;DPB=109;DPRA=0.868421;EPP=20.3821;EPPR=222.329;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=309;QR=3888;RO=101;RPL=0;RPP=20.3821;RPPR=222.329;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=101;SRP=222.329;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:693:0:0:0,-5.41854,-62.7039 0/0:11:11,0:11:423:0:0:0,-3.31133,-38.4232 0/0:25:25,0:25:967:0:0:0,-7.52575,-87.3436 0/0:22:22,0:22:836:0:0:0,-6.62266,-75.5617 0/1:25:19,6:19:736:6:233:-13.8143,0,-59.0456 0/1:8:6,2:6:233:2:76:-4.80643,0,-18.9318 dDocent_Contig_10208 8 . T A 9896.73 . AB=0.240605;ABP=1122.79;AC=6;AF=0.5;AN=12;AO=461;CIGAR=1X;DP=1916;DPB=1916;DPRA=0;EPP=1004.06;EPPR=3160.33;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=36.1128;NS=6;NUMALT=1;ODDS=0;PAIRED=0.887202;PAIREDR=0.918845;PAO=0;PQA=0;PQR=0;PRO=0;QA=17516;QR=56162;RO=1454;RPL=0;RPP=1004.06;RPPR=3160.33;RPR=461;RUN=1;SAF=461;SAP=1004.06;SAR=0;SRF=1454;SRP=3160.33;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:231:192,39:192:7504:39:1500:-65.7361,0,-437.938 0/1:313:252,61:252:9713:61:2301:-113.088,0,-510.779 0/1:224:150,74:150:5768:74:2853:-189.513,0,-325.476 0/1:233:187,46:187:7179:46:1730:-85.8143,0,-432.525 0/1:520:374,145:374:14488:145:5506:-339.186,0,-797.441 0/1:395:299,96:299:11510:96:3626:-207.557,0,-562.551 dDocent_Contig_10209 45 . C T 68.157 . AB=0.428571;ABP=3.32051;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=52;DPB=52;DPRA=0.777778;EPP=9.52472;EPPR=109.412;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.979592;PAO=0;PQA=0;PQR=0;PRO=0;QA=112;QR=1941;RO=49;RPL=0;RPP=9.52472;RPPR=109.412;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=49;SRP=109.412;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:488:0:0:0,-3.61236,-44.2715 0/0:10:10,0:10:398:0:0:0,-3.0103,-36.1779 0/0:4:4,0:4:156:0:0:0,-1.20412,-14.4149 0/1:7:4,3:4:160:3:112:-8.33852,0,-12.6762 0/0:11:11,0:11:418:0:0:0,-3.31133,-37.9645 0/0:8:8,0:8:321:0:0:0,-2.40824,-29.2579 dDocent_Contig_10210 46 . G C 2572.01 . AB=0.0616438;ABP=490.372;AC=5;AF=0.416666;AN=12;AO=28;CIGAR=1X1M;DP=525;DPB=525;DPRA=0;EPP=63.8115;EPPR=856.399;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=0.964286;PAIREDR=0.936387;PAO=0;PQA=0;PQR=0;PRO=0;QA=1078;QR=15329;RO=393;RPL=0;RPP=63.8115;RPPR=856.399;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=393;SRP=856.399;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:100:69,31,0:69:2682:31,0:1219,0:-79.8859,0,-211.421,-100.657,-220.753,-321.019 0|1:104:65,35,4:65:2502:35,4:1362,157:-92.3454,0,-194.851,-98.9994,-192.474,-303.187 0|1:60:46,13,1:46:1797:13,1:497,40:-26.91,0,-143.794,-37.461,-144.412,-184.883 0|1:88:58,23,7:58:2305:23,7:906,269:-57.0747,0,-182.856,-52.4581,-167.702,-240.121 0|0:133:121,0,10:121:4726:0,10:0,369:0,-36.4246,-424.924,-6.27199,-394.756,-391.745 0|1:40:34,0,6:34:1317:0,6:0,243:-10.207,-20.442,-128.601,0,-108.561,-106.754 dDocent_Contig_10211 12 . G T 3578.63 . AB=0.475096;ABP=4.41635;AC=6;AF=0.5;AN=12;AO=124;CIGAR=1X;DP=261;DPB=261;DPRA=0;EPP=272.273;EPPR=300.502;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.685484;PAIREDR=0.817518;PAO=0;PQA=0;PQR=0;PRO=0;QA=4953;QR=5461;RO=137;RPL=0;RPP=272.273;RPPR=300.502;RPR=124;RUN=1;SAF=124;SAP=272.273;SAR=0;SRF=137;SRP=300.502;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:14,22:14:562:22:876:-68.3103,0,-40.0862 0/1:48:29,19:29:1143:19:764:-54.6297,0,-88.7033 0/1:55:23,32:23:919:32:1267:-97.7421,0,-66.4574 0/1:54:37,17:37:1466:17:691:-46.263,0,-115.933 0/1:24:9,15:9:362:15:598:-46.9333,0,-25.7193 0/1:44:25,19:25:1009:19:757:-55.2067,0,-77.8568 dDocent_Contig_10212 90 . G A 272.237 . AB=0.290909;ABP=23.8959;AC=4;AF=0.333333;AN=12;AO=16;CIGAR=1X;DP=82;DPB=82;DPRA=1.01852;EPP=37.7539;EPPR=146.327;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=538;QR=2372;RO=66;RPL=16;RPP=37.7539;RPPR=146.327;RPR=0;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=66;SRP=146.327;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:7:4,3:4:140:3:103:-7.50281,0,-10.8377 0/0:9:9,0:9:303:0:0:0,-2.70927,-27.5968 0/0:18:18,0:18:648:0:0:0,-5.41854,-58.6494 0/1:23:20,3:20:736:3:82:-0.725589,0,-59.6465 0/1:10:3,7:3:109:7:244:-19.2863,0,-7.1577 0/1:15:12,3:12:436:3:109:-5.65264,0,-35.0666 dDocent_Contig_10213 28 . T A 218.974 . AB=0.171053;ABP=74.4403;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X1M1D3M;DP=176;DPB=173.333;DPRA=1.41304;EPP=37.7539;EPPR=343.931;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=6.93889e-18;PAIRED=0.5625;PAIREDR=0.426752;PAO=0;PQA=0;PQR=0;PRO=0;QA=635;QR=6184;RO=157;RPL=0;RPP=37.7539;RPPR=343.931;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=157;SRP=343.931;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:21:18,2,0:18:704:2,0:81,0:-1.4703,0,-57.5626,-6.88884,-58.1646,-64.8466 0|1:55:44,11,0:44:1723:11,0:440,0:-23.3994,0,-138.747,-36.6447,-142.059,-178.305 0|0:25:24,1,0:24:949:1,0:40,0:0,-3.53007,-81.7184,-7.22472,-82.0194,-85.3147 0|0:29:27,2,0:27:1072:2,0:74,0:0,-1.70444,-89.7502,-8.12781,-90.3523,-96.404 0|0:17:17,0,0:17:669:0,0:0,0:0,-5.11751,-60.5407,-5.11751,-60.5407,-60.5407 0|0:29:27,0,2:27:1067:0,2:0,77:0,-8.12781,-95.9369,-1.42073,-89.6152,-89.0132 dDocent_Contig_10215 15 . T A 116.129 . AB=0.147541;ABP=68.8308;AC=3;AF=0.25;AN=12;AO=15;CIGAR=1X;DP=195;DPB=195;DPRA=0.981818;EPP=35.5824;EPPR=391.704;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.533333;PAIREDR=0.614525;PAO=0;PQA=0;PQR=0;PRO=0;QA=609;QR=7198;RO=179;RPL=0;RPP=35.5824;RPPR=391.704;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=179;SRP=391.704;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:32,0:32:1302:0:0:0,-9.63296,-117.04 0/0:50:46,4:46:1875:4:162:0,-0.0845438,-153.976 0/1:23:21,2:21:819:2:82:-0.855988,0,-67.0996 0/1:21:16,5:16:643:5:203:-12.3314,0,-51.8809 0/1:17:15,2:15:590:2:80:-2.47428,0,-48.3139 0/0:51:49,2:49:1969:2:82:0,-7.57285,-169.623 dDocent_Contig_10216 27 . G T 250.106 . AB=0.416667;ABP=3.73412;AC=3;AF=0.25;AN=12;AO=8;CIGAR=1X;DP=83;DPB=83;DPRA=0.441176;EPP=20.3821;EPPR=165.871;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=323;QR=2956;RO=75;RPL=0;RPP=20.3821;RPPR=165.871;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=75;SRP=165.871;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:11:11,0:11:439:0:0:0,-3.31133,-39.8621 0/0:7:7,0:7:277:0:0:0,-2.10721,-25.3001 0/0:15:15,0:15:569:0:0:0,-4.51545,-51.5316 0/0:35:35,0:35:1395:0:0:0,-10.536,-125.8 1/1:3:0,3:0:0:3:123:-11.4648,-0.90309,0 0/1:12:7,5:7:276:5:200:-14.7676,0,-21.5935 dDocent_Contig_10217 40 . T C 748.323 . AB=0.177215;ABP=217.491;AC=4;AF=0.333333;AN=12;AO=44;CIGAR=1X;DP=319;DPB=319;DPRA=2;EPP=98.5551;EPPR=600.165;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1768;QR=11009;RO=275;RPL=0;RPP=98.5551;RPPR=600.165;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=275;SRP=600.165;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:44:40,4:40:1610:4:163:-1.81311,0,-131.886 0/0:53:51,2:51:2047:2:82:0,-8.17491,-176.634 0/0:29:29,0:29:1133:0:0:0,-8.72987,-102.246 0/1:57:47,10:47:1883:10:397:-18.9266,0,-152.508 0/1:75:61,14:61:2445:14:561:-28.2537,0,-197.607 0/1:61:47,14:47:1891:14:565:-32.8292,0,-152.029 dDocent_Contig_10218 192 . T C 212.495 . AB=0.28125;ABP=16.3106;AC=1;AF=0.125;AN=8;AO=16;CIGAR=1X;DP=286;DPB=286;DPRA=0.845161;EPP=37.7539;EPPR=589.308;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=644;QR=10516;RO=270;RPL=16;RPP=37.7539;RPPR=589.308;RPR=0;RUN=1;SAF=0;SAP=37.7539;SAR=16;SRF=0;SRP=589.308;SRR=270;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:96:96,0:96:3770:0:0:0,-28.8989,-339.339 0/0:59:59,0:59:2241:0:0:0,-17.7608,-201.874 0/1:32:23,9:23:892:9:358:-22.9485,0,-70.9549 0/0:99:92,7:92:3613:7:286:0,-3.68715,-299.106 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10219 7 . T A 261.873 . AB=0.166667;ABP=43.5445;AC=6;AF=0.5;AN=12;AO=13;CIGAR=1X;DP=127;DPB=127;DPRA=0.196875;EPP=31.2394;EPPR=250.558;GTI=0;LEN=1;MEANALT=1;MQM=56;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.153846;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=491;QR=4325;RO=114;RPL=0;RPP=31.2394;RPPR=250.558;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=114;SRP=250.558;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:15,1:15:566:1:39:0,-0.919915,-47.3827 0/1:13:10,3:10:386:3:111:-6.34776,0,-31.1832 0/1:29:25,4:25:947:4:152:-5.31305,0,-76.811 0/0:64:64,0:64:2426:0:0:0,-19.2659,-218.553 1/1:2:0,2:0:0:2:76:-7.21278,-0.60206,0 1/1:3:0,3:0:0:3:113:-10.5352,-0.90309,0 dDocent_Contig_10220 21 . T C 9030.74 . AB=0.747126;ABP=141.46;AC=8;AF=0.666667;AN=12;AO=286;CIGAR=1X;DP=360;DPB=360;DPRA=0;EPP=624.051;EPPR=163.699;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.996503;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11263;QR=2506;RO=74;RPL=0;RPP=624.051;RPPR=163.699;RPR=286;RUN=1;SAF=286;SAP=624.051;SAR=0;SRF=74;SRP=163.699;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:48:16,32:16:518:32:1278:-100.839,0,-32.4764 0/1:48:12,36:12:399:36:1428:-114.327,0,-21.7764 1/1:41:3,38:3:104:38:1472:-123.031,-2.64185,0 1/1:58:5,53:5:178:53:2098:-172.638,-1.09242,0 0/1:95:16,79:16:563:79:3079:-248.612,0,-22.3989 0/1:70:22,48:22:744:48:1908:-150.85,0,-46.1928 dDocent_Contig_10221 17 . C T 617.473 . AB=0;ABP=0;AC=2;AF=0.2;AN=10;AO=17;CIGAR=1X;DP=118;DPB=118;DPRA=0.673267;EPP=39.9253;EPPR=222.329;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990099;PAO=0;PQA=0;PQR=0;PRO=0;QA=678;QR=4038;RO=101;RPL=0;RPP=39.9253;RPPR=222.329;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=101;SRP=222.329;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:722:0:0:0,-5.41854,-65.303 0/0:24:24,0:24:945:0:0:0,-7.22472,-85.3507 0/0:18:18,0:18:722:0:0:0,-5.41854,-65.3048 0/0:41:41,0:41:1649:0:0:0,-12.3422,-148.64 1/1:17:0,17:0:0:17:678:-61.3493,-5.11751,0 ./.:.:.:.:.:.:.:. dDocent_Contig_10223 132 . A T 2583.06 . AB=0.636364;ABP=26.1069;AC=8;AF=0.666667;AN=12;AO=94;CIGAR=1X;DP=146;DPB=146;DPRA=0;EPP=207.129;EPPR=115.927;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3406;QR=2009;RO=52;RPL=0;RPP=207.129;RPPR=115.927;RPR=94;RUN=1;SAF=0;SAP=207.129;SAR=94;SRF=0;SRP=115.927;SRR=52;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:37:-3.69783,-0.30103,0 0/1:16:13,3:13:502:3:116:-6.00122,0,-40.7121 1/1:2:0,2:0:0:2:76:-7.21467,-0.60206,0 0/1:10:6,4:6:232:4:156:-11.407,0,-18.2386 0/1:49:10,39:10:382:39:1393:-110.891,0,-19.9834 0/1:68:23,45:23:893:45:1628:-126.315,0,-60.219 dDocent_Contig_10224 95 . G A 55.25 . AB=0.12069;ABP=75.4926;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=236;DPB=236;DPRA=1.62921;EPP=18.2106;EPPR=498.106;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.857143;PAIREDR=0.925439;PAO=0;PQA=0;PQR=0;PRO=0;QA=265;QR=8406;RO=228;RPL=3;RPP=3.32051;RPPR=3.0484;RPR=4;RUN=1;SAF=3;SAP=3.32051;SAR=4;SRF=115;SRP=3.0484;SRR=113;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:58:51,7:51:1898:7:265:-6.74685,0,-153.594 0/0:44:44,0:44:1634:0:0:0,-13.2453,-147.312 0/0:12:12,0:12:452:0:0:0,-3.61236,-41.0205 0/0:66:66,0:66:2376:0:0:0,-19.868,-214.044 0/0:12:12,0:12:448:0:0:0,-3.61236,-40.6614 0/0:44:43,0:43:1598:0:0:0,-12.9443,-144.002 dDocent_Contig_10225 97 . G A 430.184 . AB=0.333333;ABP=17.4868;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=188;DPB=188;DPRA=2.34375;EPP=46.4397;EPPR=367.818;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=692;QR=5211;RO=168;RPL=20;RPP=46.4397;RPPR=367.818;RPR=0;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=168;SRP=367.818;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:34,0:34:1059:0:0:0,-10.235,-95.5983 0/0:53:53,0:53:1614:0:0:0,-15.9546,-145.532 0/1:60:40,20:40:1265:20:692:-44.5412,0,-96.076 0/0:20:20,0:20:618:0:0:0,-6.0206,-55.9162 0/0:4:4,0:4:115:0:0:0,-1.20412,-10.6351 0/0:17:17,0:17:540:0:0:0,-5.11751,-48.905 dDocent_Contig_10226 13 . A T 245.404 . AB=0.0163934;ABP=126.927;AC=0;AF=0;AN=12;AO=19;CIGAR=1M1X4M;DP=836;DPB=843;DPRA=0.61561;EPP=44.2683;EPPR=1579.5;GTI=0;LEN=1;MEANALT=4.6;MQM=59.6842;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.0526316;PAIREDR=0.329201;PAO=0;PQA=0;PQR=0;PRO=0;QA=764;QR=28295;RO=726;RPL=0;RPP=44.2683;RPPR=1579.5;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=726;SRP=1579.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:81:65,4,4,3:65:2514:4,4,3:156,152,123:0,-6.74469,-212.025,-7.10661,-200.766,-212.384,-9.41027,-203.076,-203.435,-214.996 0|0:122:105,2,5,7:105:4090:2,5,7:78,199,277:0,-25.1973,-360.746,-15.2212,-344.962,-349.869,-8.81532,-338.556,-328.581,-342.86 0|0:61:43,5,12,1:43:1687:5,12,1:189,474,41:-26.0633,-23.5204,-160.747,0,-123.252,-135.13,-35.6224,-158.868,-135.358,-174.058 0|0:116:92,0,4,7:92:3611:0,4,7:0,162,283:0,-27.6948,-324.665,-14.3352,-311.307,-310.103,-4.36012,-301.332,-287.974,-299.225 0|0:251:234,0,8,1:234:9094:0,8,1:0,313,40:0,-70.441,-817.697,-44.7058,-791.965,-789.557,-67.1452,-814.402,-788.67,-814.101 0|0:205:187,0,12,0:187:7299:0,12,0:0,477,0:0,-56.2926,-656.281,-17.0137,-617.009,-613.397,-56.2926,-656.281,-617.009,-656.281 dDocent_Contig_10227 1 . N G 136.911 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=5.18177;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0.25;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=141;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=1;SAP=5.18177;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:72:-6.83637,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_10228 54 . C G 1461 . AB=0.439024;ABP=6.98251;AC=2;AF=0.166667;AN=12;AO=58;CIGAR=1X;DP=351;DPB=351;DPRA=1.29412;EPP=128.956;EPPR=639.252;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2217;QR=11559;RO=293;RPL=58;RPP=128.956;RPPR=639.252;RPR=0;RUN=1;SAF=58;SAP=128.956;SAR=0;SRF=293;SRP=639.252;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:42:42,0:42:1665:0:0:0,-12.6433,-150.091 0/0:61:61,0:61:2422:0:0:0,-18.3628,-218.149 0/0:50:50,0:50:1963:0:0:0,-15.0515,-176.887 0/0:75:71,4:71:2780:4:153:0,-8.43551,-236.204 0/1:58:35,23:35:1376:23:853:-59.6137,0,-106.652 0/1:65:34,31:34:1353:31:1211:-89.708,0,-102.471 dDocent_Contig_10229 100 . N C 433.663 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=14;CIGAR=3X;DP=14;DPB=14;DPRA=0;EPP=33.4109;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=455;QR=0;RO=0;RPL=14;RPP=33.4109;RPPR=0;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1|1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 1|1:3:0,3:0:0:3:88:-8.21157,-0.90309,0 1|1:6:0,6:0:0:6:196:-17.9612,-1.80618,0 .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 dDocent_Contig_10230 16 . C G 44.8212 . AB=0.107692;ABP=89.9026;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=481;DPB=481;DPRA=1.04167;EPP=31.2394;EPPR=1014.92;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.692308;PAIREDR=0.830472;PAO=0;PQA=0;PQR=0;PRO=0;QA=520;QR=18705;RO=466;RPL=0;RPP=31.2394;RPPR=1014.92;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=466;SRP=1014.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:57:56,1:56:2230:1:36:0,-13.5604,-197.268 0/0:106:103,2:103:4139:2:81:0,-24.1306,-364.879 0/1:65:58,7:58:2316:7:280:-6.00498,0,-189.016 0/0:97:94,3:94:3786:3:123:0,-17.7351,-329.269 0/0:73:73,0:73:2944:0:0:0,-21.9752,-265.043 0/0:83:82,0:82:3290:0:0:0,-24.6845,-295.776 dDocent_Contig_10231 97 . G T 388.741 . AB=0.23913;ABP=57.3915;AC=2;AF=0.166667;AN=12;AO=27;CIGAR=1X;DP=250;DPB=250;DPRA=1.5;EPP=61.6401;EPPR=487.249;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.740741;PAIREDR=0.811659;PAO=0;PQA=0;PQR=0;PRO=0;QA=943;QR=7596;RO=223;RPL=16;RPP=5.02092;RPPR=5.82445;RPR=11;RUN=1;SAF=16;SAP=5.02092;SAR=11;SRF=120;SRP=5.82445;SRR=103;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1125:0:0:0,-9.93399,-101.555 0/0:58:53,5:53:1791:5:175:0,-1.36611,-145.379 0/1:45:31,14:31:1065:14:489:-30.7956,0,-82.612 0/1:47:39,8:39:1303:8:279:-11.3003,0,-103.417 0/0:28:28,0:28:957:0:0:0,-8.42884,-86.4412 0/0:39:39,0:39:1355:0:0:0,-11.7402,-122.252 dDocent_Contig_10232 113 . C A 75.2161 . AB=0.307692;ABP=7.18621;AC=1;AF=0.1;AN=10;AO=4;CIGAR=1X;DP=43;DPB=43;DPRA=1.73333;EPP=11.6962;EPPR=87.6977;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=141;QR=1328;RO=39;RPL=0;RPP=11.6962;RPPR=87.6977;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=87.6977;SRR=39;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:6:6,0:6:214:0:0:0,-1.80618,-19.6078 0/0:8:8,0:8:272:0:0:0,-2.40824,-24.8104 ./.:.:.:.:.:.:.:. 0/0:8:8,0:8:272:0:0:0,-2.40824,-24.8102 0/1:13:9,4:9:298:4:141:-9.12364,0,-23.2273 0/0:8:8,0:8:272:0:0:0,-2.40824,-24.8104 dDocent_Contig_10233 1 . N G 821.702 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=27;CIGAR=1X;DP=27;DPB=27;DPRA=0;EPP=61.6401;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=39.2963;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=925;QR=0;RO=0;RPL=0;RPP=61.6401;RPPR=0;RPR=27;RUN=1;SAF=0;SAP=61.6401;SAR=27;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:5:0,5:0:0:5:174:-15.7813,-1.50515,0 1/1:7:0,7:0:0:7:226:-19.3973,-2.10721,0 1/1:1:0,1:0:0:1:35:-3.3545,-0.30103,0 1/1:7:0,7:0:0:7:245:-21.4688,-2.10721,0 1/1:7:0,7:0:0:7:245:-21.4688,-2.10721,0 ./.:.:.:.:.:.:.:. dDocent_Contig_10234 17 . A T 4161.26 . AB=0.146479;ABP=388.376;AC=1;AF=0.0833333;AN=12;AO=52;CIGAR=1X3M1X1M1X3M1X;DP=355;DPB=354.909;DPRA=0;EPP=115.927;EPPR=191.928;GTI=0;LEN=1;MEANALT=5.5;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=1;PAIREDR=0.977011;PAO=0;PQA=0;PQR=0;PRO=0;QA=1989;QR=3429;RO=87;RPL=0;RPP=115.927;RPPR=191.928;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=87;SRP=191.928;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:44:11,9,2,2,12,7:11:433:9,2,2,12,7:346,75,81,465,278:-34.8809,-9.787,-42.7013,-32.0496,-39.268,-67.0705,-31.5118,-38.7304,-60.9926,-66.5332,0,-7.21993,-29.4819,-28.944,-32.012,-15.3053,-22.5246,-44.787,-44.2494,-12.7379,-48.8225 0|0:69:23,3,1,0,20,20:23:906:3,1,0,20,20:113,38,0,763,773:-56.5494,-54.2139,-127.852,-60.3566,-125.639,-134.597,-63.4731,-128.755,-134.898,-138.014,-0.891914,-66.176,-72.3185,-75.4349,-69.4143,0,-65.2858,-71.4283,-74.5447,-11.9662,-68.5241 0|0:40:12,5,1,2,18,2:12:475:5,1,2,18,2:193,39,79,687,81:-52.7282,-40.4899,-78.0832,-53.1345,-76.3824,-91.9316,-49.8393,-73.0874,-85.7317,-88.3355,0,-23.2487,-35.8912,-32.5962,-33.6783,-49.6599,-72.9082,-85.5526,-82.2575,-32.4166,-88.1565 0|0:73:28,6,4,4,15,15:28:1100:6,4,4,15,15:235,145,158,601,602:-41.177,-30.282,-118.95,-37.7705,-108.92,-127.04,-36.6051,-107.756,-115.243,-125.876,-0.09152,-71.2431,-78.7312,-77.5665,-86.0519,0,-71.1517,-78.6398,-77.4751,-40.9617,-85.9606 1|0:56:3,23,1,0,15,14:3:119:23,1,0,15,14:881,38,0,600,568:-111.017,-39.6275,-42.4994,-108.804,-46.3072,-118.299,-111.92,-49.4231,-118.6,-121.716,-62.4932,0,-69.1734,-72.2896,-67.7742,-65.0732,-2.57747,-71.7535,-74.8697,-25.4399,-70.6553 0|0:73:10,6,7,0,7,41:10:396:6,7,0,7,41:221,268,0,276,1627:-130.932,-115.877,-146.665,-111.949,-126.479,-142.437,-133.943,-148.472,-144.544,-166.538,-111.236,-125.766,-121.838,-143.832,-141.724,0,-14.5365,-10.6068,-32.6021,-9.89213,-20.2599 dDocent_Contig_10235 10 . G C 678.225 . AB=0.128364;ABP=582.434;AC=2;AF=0.166667;AN=12;AO=102;CIGAR=1X;DP=1327;DPB=1327;DPRA=0;EPP=215.9;EPPR=2531.47;GTI=0;LEN=1;MEANALT=2.16667;MQM=54.5;MQMR=59.8394;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.833333;PAIREDR=0.929636;PAO=0;PQA=0;PQR=0;PRO=0;QA=4063;QR=47915;RO=1208;RPL=0;RPP=224.5;RPPR=2626.15;RPR=102;RUN=1;SAF=101;SAP=215.9;SAR=1;SRF=1197;SRP=2531.47;SRR=11;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:199:168,29:168:6623:29:1162:-34.529,0,-536.102 0/0:319:306,11:306:12189:11:444:0,-56.0595,-1056.03 0/0:130:122,6:122:4853:6:211:0,-22.1558,-419.908 0/1:284:242,33:242:9649:33:1327:-36.5154,0,-783.312 0/0:184:173,11:173:6849:11:438:0,-18.6975,-579.407 0/0:211:197,12:197:7752:12:481:0,-19.6711,-652.773 dDocent_Contig_10236 17 . G T 388.637 . AB=0.230769;ABP=52.119;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=446;DPB=446;DPRA=1.05978;EPP=42.0968;EPPR=932.4;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992991;PAO=0;PQA=0;PQR=0;PRO=0;QA=706;QR=16894;RO=428;RPL=0;RPP=42.0968;RPPR=932.4;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=428;SRP=932.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:39,0:39:1554:0:0:0,-11.7402,-140.101 0/0:57:57,0:57:2230:0:0:0,-17.1587,-200.878 0/0:22:22,0:22:874:0:0:0,-6.62266,-78.9696 0/1:78:60,18:60:2386:18:706:-40.3866,0,-191.418 0/0:161:161,0:161:6352:0:0:0,-48.4658,-571.472 0/0:89:89,0:89:3498:0:0:0,-26.7917,-314.88 dDocent_Contig_10237 86 . G A 178.217 . AB=0.275;ABP=20.5992;AC=3;AF=0.25;AN=12;AO=11;CIGAR=1X;DP=82;DPB=82;DPRA=0.952381;EPP=26.8965;EPPR=157.185;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.971831;PAO=0;PQA=0;PQR=0;PRO=0;QA=376;QR=2336;RO=71;RPL=11;RPP=26.8965;RPPR=157.185;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=71;SRP=157.185;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:6:6,0:6:202:0:0:0,-1.80618,-18.511 0/0:22:22,0:22:703:0:0:0,-6.62266,-63.5686 0/1:12:5,7:5:169:7:237:-18.0494,0,-11.9306 0/1:12:10,2:10:317:2:69:-2.9403,0,-25.2243 0/1:16:14,2:14:468:2:70:-1.83092,0,-37.6239 0/0:14:14,0:14:477:0:0:0,-4.21442,-43.2555 dDocent_Contig_10238 22 . T A 2215.05 . AB=0.146893;ABP=386.392;AC=6;AF=0.5;AN=12;AO=52;CIGAR=7M1X3M;DP=354;DPB=361.091;DPRA=0;EPP=115.927;EPPR=480.734;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.961538;PAIREDR=0.954545;PAO=0;PQA=0;PQR=0;PRO=0;QA=2039;QR=8624;RO=220;RPL=0;RPP=115.927;RPPR=480.734;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=220;SRP=480.734;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:41:18,17,5:18:713:17,5:667,200:-49.4321,0,-53.5679,-38.3745,-42.2101,-95.5574 0|1:85:49,30,6:49:1910:30,6:1195,240:-83.6518,0,-147.948,-78.6332,-137.209,-233.81 0|1:43:30,8,5:30:1193:8,5:317,183:-17.0795,0,-95.846,-11.1758,-83.3125,-107.899 0|1:66:52,5,8:52:2014:5,8:187,326:-11.2576,-11.6117,-175.525,0,-150.133,-163.034 0|1:43:27,8,7:27:1073:8,7:317,279:-17.9617,0,-85.9318,-3.11378,-65.3645,-89.3483 0|1:76:44,10,21:44:1721:10,21:394,811:-53.3437,-34.1709,-172.663,0,-109.084,-135.178 dDocent_Contig_10239 33 . T C 126.429 . AB=0.119658;ABP=150.021;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=285;DPB=285;DPRA=1.39286;EPP=33.4109;EPPR=591.479;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.928571;PAIREDR=0.863469;PAO=0;PQA=0;PQR=0;PRO=0;QA=559;QR=10731;RO=271;RPL=0;RPP=33.4109;RPPR=591.479;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=271;SRP=591.479;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1072:0:0:0,-8.12781,-96.7719 0/0:46:46,0:46:1824:0:0:0,-13.8474,-164.375 0/0:31:31,0:31:1231:0:0:0,-9.33193,-111.063 0/0:64:64,0:64:2553:0:0:0,-19.2659,-229.911 0/1:66:57,9:57:2272:9:368:-13.6174,0,-184.782 0/1:51:46,5:46:1779:5:191:-2.20434,0,-144.98 dDocent_Contig_10240 11 . C G 75.1021 . AB=0.142857;ABP=10.7656;AC=3;AF=0.25;AN=12;AO=3;CIGAR=1X;DP=41;DPB=41;DPRA=0.5625;EPP=9.52472;EPPR=47.8112;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.2105;NS=6;NUMALT=1;ODDS=4.33681e-19;PAIRED=1;PAIREDR=0.842105;PAO=0;PQA=0;PQR=0;PRO=0;QA=106;QR=1502;RO=38;RPL=0;RPP=9.52472;RPPR=85.5263;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=33;SRP=47.8112;SRR=5;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:5:5,0:5:203:0:0:0,-1.50515,-18.6531 0/0:10:10,0:10:397:0:0:0,-3.0103,-36.0891 0/0:6:6,0:6:241:0:0:0,-1.80618,-22.0661 0/0:11:11,0:11:448:0:0:0,-3.31133,-40.676 1/1:2:0,2:0:0:2:74:-7.02402,-0.60206,0 0/1:7:6,1:6:213:1:32:-1.0921,0,-17.3357 dDocent_Contig_10241 85 . T C 82.1668 . AB=0.147059;ABP=76.5849;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=236;DPB=236;DPRA=0.918699;EPP=33.4109;EPPR=485.077;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.635135;PAO=0;PQA=0;PQR=0;PRO=0;QA=483;QR=7796;RO=222;RPL=7;RPP=3.0103;RPPR=35.915;RPR=7;RUN=1;SAF=7;SAP=3.0103;SAR=7;SRF=140;SRP=35.915;SRR=82;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:20,4:20:677:4:135:-5.25865,0,-54.0174 0/1:44:38,6:38:1310:6:212:-6.17976,0,-104.948 0/0:45:41,4:41:1464:4:136:0,-0.970649,-119.478 0/0:40:40,0:40:1424:0:0:0,-12.0412,-128.458 0/0:36:36,0:36:1263:0:0:0,-10.8371,-113.974 0/0:47:47,0:47:1658:0:0:0,-14.1484,-149.506 dDocent_Contig_10242 128 . G A 141.783 . AB=0.164179;ABP=68.6406;AC=4;AF=0.333333;AN=12;AO=11;CIGAR=1X1M;DP=102;DPB=102;DPRA=1.35354;EPP=26.8965;EPPR=187.585;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.818182;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=405;QR=3304;RO=85;RPL=0;RPP=26.8965;RPPR=187.585;RPR=11;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=187.585;SRR=85;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:11:3,3,5:3:121:3,5:120,172:-13.0255,-4.02257,-13.1159,0,-0.0925071,-8.47074 0|1:41:37,0,4:37:1429:0,4:0,157:-2.16657,-13.3047,-130.627,0,-117.714,-116.51 0|0:14:14,0,0:14:532:0,0:0,0:0,-4.21442,-48.2128,-4.21442,-48.2128,-48.2128 0|1:15:12,1,2:12:474:1,2:41,76:-2.60084,-2.81921,-41.5322,0,-35.6023,-38.3855 0|0:19:18,1,0:18:708:1,0:40,0:0,-1.72389,-60.049,-5.41854,-60.35,-63.6455 0|1:2:1,1,0:1:40:1,0:41,0:-3.49251,0,-3.39362,-3.79354,-3.69465,-7.08367 dDocent_Contig_10243 9 . G A 3594.65 . AB=0.133758;ABP=185.926;AC=1;AF=0.0833333;AN=12;AO=21;CIGAR=1X1M1X;DP=342;DPB=342;DPRA=0;EPP=48.6112;EPPR=315.702;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.993056;PAO=0;PQA=0;PQR=0;PRO=0;QA=816;QR=5486;RO=144;RPL=0;RPP=48.6112;RPPR=315.702;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=144;SRP=315.702;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:50:33,0,3,14:33:1257:0,3,14:0,115,515:-31.9022,-41.8361,-144.953,-32.3943,-135.514,-134.611,0,-103.107,-93.6683,-98.8928 0|0:70:24,0,17,29:24:907:0,17,29:0,661,973:-69.3996,-76.6243,-150.98,-22.2804,-96.6494,-91.5319,0,-74.3398,-20.0141,-65.6099 0|0:37:22,1,1,13:22:841:1,1,13:39,39,476:-31.7105,-35.1255,-103.844,-35.1255,-100.939,-103.844,0,-65.7951,-65.7951,-65.0879 0|0:65:40,0,12,13:40:1526:0,12,13:0,454,505:-29.4616,-41.5028,-166.694,-4.29107,-129.478,-125.866,0,-125.195,-87.9787,-121.281 1|0:68:8,13,2,45:8:305:13,2,45:504,72,1555:-137.575,-98.565,-119.679,-134.109,-117.717,-158.531,-16.3942,0,-35.5418,-27.868 0|0:52:17,7,3,25:17:650:7,3,25:273,95,932:-70.6378,-53.3091,-104.545,-68.1196,-99.0156,-120.556,0,-30.9001,-45.7126,-45.82 dDocent_Contig_10244 106 . N T 3370.16 . AB=0.52;ABP=3.09716;AC=12;AF=1;AN=12;AO=15;CIGAR=1X7I2X3M;DP=113;DPB=244.833;DPRA=1.26;EPP=35.5824;EPPR=0;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=0;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=520;QR=0;RO=0;RPL=0;RPP=35.5824;RPPR=0;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:10:0,2,7:0:0:2,7:67,246:-25.5232,-20.1037,-19.5017,-5.4703,0,-3.36309 1|1:38:0,36,2:0:0:36,2:1272,70:-113.938,-10.8371,0,-108.242,-4.79181,-107.64 1|1:15:0,9,6:0:0:9,6:323,204:-43.137,-16.8867,-14.1774,-26.5972,0,-24.791 1|1:26:0,26,0:0:0:26,0:922,0:-82.944,-7.82678,0,-82.944,-7.82678,-82.944 1|1:2:0,2,0:0:0:2,0:67,0:-6.36284,-0.60206,0,-6.36284,-0.60206,-6.36284 1|1:22:0,22,0:0:0:22,0:756,0:-68.3298,-6.62266,0,-68.3298,-6.62266,-68.3298 dDocent_Contig_10245 107 . N A 174.395 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=171;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:30:-2.99957,-0.30103,0 1/1:2:0,2:0:0:2:71:-6.74206,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10246 91 . T A 368.086 . AB=0.151261;ABP=254.427;AC=3;AF=0.25;AN=12;AO=38;CIGAR=1M2D1X;DP=467;DPB=448;DPRA=1.28244;EPP=85.5263;EPPR=925.886;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.684211;PAIREDR=0.590588;PAO=0;PQA=0;PQR=0;PRO=0;QA=1324;QR=14515;RO=425;RPL=23;RPP=6.66752;RPPR=110.434;RPR=15;RUN=1;SAF=23;SAP=6.66752;SAR=15;SRF=285;SRP=110.434;SRR=140;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:62:52,10:52:1800:10:329:-11.2616,0,-143.623 0|0:98:94,2:94:3212:2:72:0,-22.3321,-282.569 0|1:85:74,11:74:2530:11:393:-10.1231,0,-202.373 0|1:91:75,15:75:2535:15:530:-20.6458,0,-201.027 0|0:65:65,0:65:2245:0:0:0,-19.5669,-202.321 0|0:66:65,0:65:2193:0:0:0,-19.5669,-197.564 dDocent_Contig_10247 26 . G C 224.056 . AB=0.275862;ABP=28.3192;AC=4;AF=0.333333;AN=12;AO=19;CIGAR=1X;DP=190;DPB=190;DPRA=0.876812;EPP=44.2683;EPPR=374.332;GTI=0;LEN=1;MEANALT=1;MQM=25.6316;MQMR=59.9825;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.988304;PAO=0;PQA=0;PQR=0;PRO=0;QA=767;QR=6775;RO=171;RPL=0;RPP=44.2683;RPPR=374.332;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=171;SRP=374.332;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:61:60,1:60:2407:1:41:0,-16.9637,-215.381 0/1:27:22,5:22:869:5:204:-1.96608,0,-70.39 0/0:32:32,0:32:1252:0:0:0,-9.63296,-112.949 0/0:37:37,0:37:1453:0:0:0,-11.1381,-131.017 1/1:2:0,2:0:0:2:80:-5.44551,-0.60206,0 0/1:31:20,11:20:794:11:442:-18.1195,0,-62.4453 dDocent_Contig_10249 8 . T A 1771.37 . AB=0.415663;ABP=13.2659;AC=5;AF=0.416667;AN=12;AO=69;CIGAR=1X;DP=181;DPB=181;DPRA=2.21333;EPP=152.842;EPPR=246.215;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.985507;PAIREDR=0.991071;PAO=0;PQA=0;PQR=0;PRO=0;QA=2607;QR=4260;RO=112;RPL=0;RPP=152.842;RPPR=246.215;RPR=69;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=112;SRP=246.215;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:13,3:13:488:3:115:-5.90841,0,-39.447 0/1:19:12,7:12:447:7:249:-17.0325,0,-34.8492 0/0:15:15,0:15:574:0:0:0,-4.51545,-52.0012 0/1:24:10,14:10:374:14:529:-40.7271,0,-26.7854 0/1:58:21,37:21:810:37:1408:-109.541,0,-55.7656 0/1:49:41,8:41:1567:8:306:-13.1505,0,-126.55 dDocent_Contig_10250 7 . T A 62.971 . AB=0.190476;ABP=20.4855;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=143;DPB=143;DPRA=1.38333;EPP=16.0391;EPPR=300.502;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=0.759124;PAO=0;PQA=0;PQR=0;PRO=0;QA=231;QR=5224;RO=137;RPL=0;RPP=16.0391;RPPR=300.502;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=137;SRP=300.502;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:637:0:0:0,-5.11751,-57.6629 0/0:32:31,1:31:1180:1:39:0,-5.7364,-102.598 0/1:21:17,4:17:656:4:153:-7.81998,0,-53.0543 0/0:30:29,1:29:1113:1:39:0,-5.13434,-96.5761 0/0:27:27,0:27:1025:0:0:0,-8.12781,-92.5545 0/0:16:16,0:16:613:0:0:0,-4.81648,-55.5081 dDocent_Contig_10251 48 . T C 155.796 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=161;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:80:-7.59179,-0.60206,0 dDocent_Contig_10252 42 . G A 214.055 . AB=0.17284;ABP=78.3148;AC=1;AF=0.125;AN=8;AO=14;CIGAR=1X;DP=288;DPB=288;DPRA=1.17391;EPP=33.4109;EPPR=563.757;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.978102;PAO=0;PQA=0;PQR=0;PRO=0;QA=524;QR=10744;RO=274;RPL=0;RPP=33.4109;RPPR=538.746;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=271;SRP=572.221;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:79:79,0:79:3151:0:0:0,-23.7814,-283.67 0/0:93:93,0:93:3648:0:0:0,-27.9958,-328.35 0/0:35:35,0:35:1358:0:0:0,-10.536,-122.484 0/1:81:67,14:67:2587:14:524:-23.1045,0,-208.572 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10253 105 . N G 183.618 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=7;CIGAR=2X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=43.5714;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=231;QR=0;RO=0;RPL=0;RPP=18.2106;RPPR=0;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:1:0,1:0:0:1:33:-2.07363,-0.30103,0 .:.:.:.:.:.:.:. 1|1:6:0,6:0:0:6:198:-15.9842,-1.80618,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_10255 10 . C A 4097.52 . AB=0.555556;ABP=10.0073;AC=6;AF=0.5;AN=12;AO=145;CIGAR=1M13I3M1X;DP=261;DPB=640.6;DPRA=0;EPP=317.874;EPPR=252.73;GTI=0;LEN=1;MEANALT=1.16667;MQM=54.4621;MQMR=59.8435;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.973913;PAO=0;PQA=0;PQR=0;PRO=0;QA=5553;QR=4361;RO=115;RPL=0;RPP=317.874;RPPR=252.73;RPR=145;RUN=1;SAF=145;SAP=317.874;SAR=0;SRF=115;SRP=252.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:31:10,20:10:383:20:773:-60.1852,0,-25.4687 0|1:24:3,21:3:112:21:793:-64.2996,0,-3.05973 0|1:46:17,29:17:646:29:1116:-86.3254,0,-44.6282 0|1:57:37,20:37:1409:20:782:-53.4429,0,-109.933 0|1:36:11,25:11:397:25:936:-73.3811,0,-25.2298 0|1:67:37,30:37:1414:30:1153:-83.3337,0,-107.369 dDocent_Contig_10256 10 . C G 474.879 . AB=0.0688525;ABP=495.465;AC=4;AF=0.333334;AN=12;AO=32;CIGAR=4M2X1M1D9M;DP=554;DPB=538.294;DPRA=0;EPP=72.4974;EPPR=860.742;GTI=0;LEN=1;MEANALT=5.66667;MQM=51.6562;MQMR=60;NS=6;NUMALT=4;ODDS=5.55112e-17;PAIRED=0.4375;PAIREDR=0.997468;PAO=0;PQA=0;PQR=0;PRO=0;QA=1255;QR=15322;RO=395;RPL=0;RPP=72.4974;RPPR=860.742;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=395;SRP=860.742;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:67:46,8,4,1,7:46:1783:8,4,1,7:112,56,40,276:-8.4112,-16.7605,-160.908,-19.5014,-160.551,-164.879,-18.9547,-160.02,-162.787,-165.255,0,-141.136,-143.901,-143.373,-144.562 0|1:66:39,11,1,4,8:39:1514:11,1,4,8:152,14,144,312:-13.7856,-18.1478,-139.256,-24.8354,-141.876,-149.008,-14.1461,-131.206,-137.945,-137.433,0,-117.095,-123.831,-113.158,-122.115 0|1:58:22,7,13,10,4:22:851:7,13,10,4:96,182,353,159:-20.2772,-22.229,-90.0882,-17.909,-83.2134,-83.9555,0,-65.3348,-61.014,-66.9931,-14.1055,-79.4159,-75.0907,-57.2202,-82.8833 0|0:143:116,8,4,1,8:116:4495:8,4,1,8:106,56,36,319:0,-29.9414,-396.873,-32.16,-396.506,-400.325,-31.9778,-396.344,-398.592,-401.067,-8.66956,-373.092,-375.34,-375.178,-375.708 0|0:106:85,2,0,8,3:85:3300:2,0,8,3:28,0,304,110:0,-24.22,-294.784,-25.5875,-295.386,-296.773,-2.79731,-272.605,-273.991,-271.583,-17.0184,-286.82,-288.206,-265.424,-287.303 0|1:114:87,7,0,13,2:87:3379:7,0,13,2:98,0,500,79:-12.2358,-33.6194,-309.184,-38.4254,-311.291,-316.146,0,-272.928,-277.78,-273.867,-31.9167,-304.79,-309.644,-271.279,-309.042 dDocent_Contig_10257 129 . T C 91.6493 . AB=0;ABP=0;AC=2;AF=0.2;AN=10;AO=4;CIGAR=1X;DP=109;DPB=109;DPRA=0.152381;EPP=11.6962;EPPR=231.015;GTI=0;LEN=1;MEANALT=1;MQM=30;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=110;QR=3494;RO=105;RPL=0;RPP=11.6962;RPPR=231.015;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=231.015;SRR=105;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1099:0:0:0,-9.93399,-99.2095 0/0:17:17,0:17:571:0:0:0,-5.11751,-51.708 0/0:6:6,0:6:210:0:0:0,-1.80618,-19.2425 0/0:49:49,0:49:1614:0:0:0,-14.7505,-145.541 ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:110:-8.76692,-1.20412,0 dDocent_Contig_10258 10 . C A 82389.1 . AB=0.901408;ABP=1990.37;AC=10;AF=0.833333;AN=12;AO=3998;CIGAR=1X;DP=4208;DPB=4208;DPRA=0;EPP=53.2051;EPPR=402.607;GTI=0;LEN=1;MEANALT=1.83333;MQM=30.7956;MQMR=59.8883;NS=6;NUMALT=1;ODDS=1.11022e-16;PAIRED=0.443222;PAIREDR=0.994681;PAO=0;PQA=0;PQR=0;PRO=0;QA=149058;QR=7555;RO=188;RPL=0;RPP=8684.56;RPPR=411.247;RPR=3998;RUN=1;SAF=2151;SAP=53.2051;SAR=1847;SRF=187;SRP=402.607;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:658:68,589:68:2744:589:21784:-1201.92,0,-48.8891 0/1:762:70,691:70:2797:691:25536:-1310.43,0,-22.4364 1/1:600:28,571:28:1128:571:20840:-1052.49,-78.7417,0 1/1:647:22,622:22:886:622:23255:-1510.1,-113.979,0 1/1:778:0,762:0:0:762:29169:-1650.43,-229.385,0 1/1:763:0,763:0:0:763:28474:-1516.77,-229.686,0 dDocent_Contig_10259 24 . G A 477.679 . AB=0.46875;ABP=3.28173;AC=3;AF=0.3;AN=10;AO=17;CIGAR=1X;DP=97;DPB=97;DPRA=1.41935;EPP=39.9253;EPPR=176.728;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=685;QR=3183;RO=80;RPL=0;RPP=39.9253;RPPR=176.728;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=80;SRP=176.728;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:854:0:0:0,-6.32163,-77.1705 0/0:33:32,1:32:1247:1:41:0,-5.83942,-108.406 0/0:10:10,0:10:400:0:0:0,-3.0103,-36.3597 0/1:32:17,15:17:682:15:603:-44.9739,0,-52.0734 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 dDocent_Contig_10260 8 . T G 97.9206 . AB=0.176471;ABP=33.9218;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=329;DPB=329;DPRA=1.47368;EPP=29.068;EPPR=691.367;GTI=0;LEN=1;MEANALT=1;MQM=59.75;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.583333;PAIREDR=0.952681;PAO=0;PQA=0;PQR=0;PRO=0;QA=451;QR=12171;RO=317;RPL=0;RPP=29.068;RPPR=691.367;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=317;SRP=691.367;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:28,6:28:1088:6:232:-11.0139,0,-87.9889 0/0:37:37,0:37:1430:0:0:0,-11.1381,-128.979 0/0:97:93,4:93:3528:4:141:0,-16.1679,-304.617 0/0:61:61,0:61:2356:0:0:0,-18.3628,-212.248 0/0:65:63,2:63:2425:2:78:0,-12.1635,-211.053 0/0:35:35,0:35:1344:0:0:0,-10.536,-121.246 dDocent_Contig_10261 19 . C A 515.757 . AB=0.289474;ABP=32.268;AC=3;AF=0.25;AN=12;AO=24;CIGAR=1X;DP=262;DPB=262;DPRA=0.57377;EPP=55.1256;EPPR=519.821;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=952;QR=9468;RO=238;RPL=0;RPP=55.1256;RPPR=519.821;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=238;SRP=519.821;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:47:47,0:47:1870:0:0:0,-14.1484,-168.504 0/0:64:62,2:62:2450:2:79:0,-11.7687,-213.153 0/1:38:32,6:32:1291:6:244:-10.8997,0,-105.017 0/0:75:75,0:75:2990:0:0:0,-22.5772,-269.188 0/1:24:15,9:15:591:9:351:-24.7221,0,-46.2974 0/1:14:7,7:7:276:7:278:-21.1757,0,-20.9915 dDocent_Contig_10262 19 . T C 389.501 . AB=0.541667;ABP=3.37221;AC=1;AF=0.1;AN=10;AO=13;CIGAR=1X;DP=69;DPB=69;DPRA=2.13333;EPP=31.2394;EPPR=124.613;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=527;QR=2236;RO=56;RPL=0;RPP=31.2394;RPPR=124.613;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=56;SRP=124.613;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:3:3,0:3:123:0:0:0,-0.90309,-11.4648 ./.:.:.:.:.:.:.:. 0/0:27:27,0:27:1078:0:0:0,-8.12781,-97.3022 0/0:6:6,0:6:245:0:0:0,-1.80618,-22.4295 0/0:9:9,0:9:347:0:0:0,-2.70927,-31.5826 0/1:24:11,13:11:443:13:527:-40.552,0,-32.9994 dDocent_Contig_10263 80 . G C 403.121 . AB=0.212121;ABP=74.2741;AC=2;AF=0.166667;AN=12;AO=21;CIGAR=1X;DP=244;DPB=244;DPRA=1.36552;EPP=48.6112;EPPR=487.249;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=807;QR=8133;RO=223;RPL=21;RPP=48.6112;RPPR=487.249;RPR=0;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=223;SRP=487.249;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:32,0:32:1141:0:0:0,-9.63296,-102.997 0/0:13:13,0:13:466:0:0:0,-3.91339,-42.272 0/0:51:51,0:51:1886:0:0:0,-15.3525,-169.999 0/0:49:49,0:49:1756:0:0:0,-14.7505,-158.302 0/1:46:36,10:36:1356:10:378:-20.5229,0,-108.48 0/1:53:42,11:42:1528:11:429:-23.0111,0,-121.83 dDocent_Contig_10264 21 . G C 3905.36 . AB=0.493506;ABP=3.0667;AC=7;AF=0.583333;AN=12;AO=125;CIGAR=1X;DP=203;DPB=203;DPRA=0;EPP=274.444;EPPR=172.385;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.008;PAIREDR=0.666667;PAO=0;PQA=0;PQR=0;PRO=0;QA=4936;QR=3090;RO=78;RPL=0;RPP=274.444;RPPR=172.385;RPR=125;RUN=1;SAF=125;SAP=274.444;SAR=0;SRF=78;SRP=172.385;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:19,7:19:740:7:286:-18.288,0,-59.0867 0/1:44:26,18:26:1019:18:716:-51.521,0,-78.7572 0/1:30:16,14:16:644:14:567:-42.3414,0,-49.263 0/1:41:9,32:9:367:32:1268:-102.045,0,-21.053 1/1:49:0,49:0:0:49:1907:-171.83,-14.7505,0 0/1:13:8,5:8:320:5:192:-13.7313,0,-25.2528 dDocent_Contig_10265 25 . C T 274.578 . AB=0.75;ABP=9.52472;AC=1;AF=0.1;AN=10;AO=9;CIGAR=1X;DP=112;DPB=112;DPRA=0.48;EPP=22.5536;EPPR=226.672;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=359;QR=4086;RO=103;RPL=0;RPP=22.5536;RPPR=226.672;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=103;SRP=226.672;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:719:0:0:0,-5.41854,-65.0359 0/0:17:17,0:17:675:0:0:0,-5.11751,-61.0802 0/0:30:30,0:30:1190:0:0:0,-9.0309,-107.38 0/0:35:35,0:35:1381:0:0:0,-10.536,-124.544 ./.:.:.:.:.:.:.:. 0/1:12:3,9:3:121:9:359:-29.0599,0,-7.66784 dDocent_Contig_10266 10 . A T 84.9039 . AB=0.101266;ABP=221.202;AC=1;AF=0.0833333;AN=12;AO=39;CIGAR=1X;DP=887;DPB=887;DPRA=0;EPP=87.6977;EPPR=1844.42;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.976415;PAO=0;PQA=0;PQR=0;PRO=0;QA=1536;QR=33402;RO=848;RPL=0;RPP=87.6977;RPPR=1844.42;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=848;SRP=1844.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:86:82,4:82:3193:4:161:0,-11.0131,-272.577 0/0:155:151,4:151:5937:4:153:0,-32.5184,-519.997 0/0:104:101,3:101:3954:3:120:0,-20.1192,-344.675 0/1:158:142,16:142:5614:16:636:-10.0133,0,-457.537 0/0:187:177,10:177:7009:10:388:0,-21.0168,-595.239 0/0:197:195,2:195:7695:2:78:0,-51.8996,-684.768 dDocent_Contig_10267 14 . G A 4249.41 . AB=0.348148;ABP=30.0492;AC=7;AF=0.583333;AN=12;AO=131;CIGAR=1X;DP=242;DPB=242;DPRA=1.90435;EPP=287.473;EPPR=244.044;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5215;QR=4439;RO=111;RPL=0;RPP=287.473;RPPR=244.044;RPR=131;RUN=1;SAF=131;SAP=287.473;SAR=0;SRF=111;SRP=244.044;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:918:0:0:0,-6.92369,-82.9238 0/1:41:26,15:26:1034:15:606:-42.5359,0,-81.009 0/1:67:49,18:49:1964:18:711:-44.1478,0,-156.783 0/1:27:13,14:13:523:14:550:-41.7083,0,-39.2888 1/1:58:0,58:0:0:58:2297:-206.89,-17.4597,0 1/1:26:0,26:0:0:26:1051:-94.8812,-7.82678,0 dDocent_Contig_10268 29 . T A 303.275 . AB=0.151724;ABP=155.777;AC=4;AF=0.333333;AN=12;AO=25;CIGAR=1X;DP=199;DPB=199;DPRA=0;EPP=57.2971;EPPR=380.846;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.96;PAIREDR=0.902299;PAO=0;PQA=0;PQR=0;PRO=0;QA=1006;QR=6965;RO=174;RPL=0;RPP=57.2971;RPPR=380.846;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=174;SRP=380.846;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:22,4:22:850:4:162:-7.13997,0,-68.9702 0/1:42:38,4:38:1523:4:162:-2.32349,0,-124.669 0/1:36:28,8:28:1126:8:325:-18.7826,0,-90.786 0/1:41:35,6:35:1414:6:236:-9.27005,0,-115.166 0/0:27:26,1:26:1051:1:40:0,-4.13213,-90.8845 0/0:27:25,2:25:1001:2:81:0,-0.442076,-82.7 dDocent_Contig_10269 93 . T C 700.062 . AB=0.545455;ABP=3.99733;AC=3;AF=0.25;AN=12;AO=30;CIGAR=1X;DP=125;DPB=125;DPRA=0.785714;EPP=68.1545;EPPR=209.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1009;QR=3069;RO=95;RPL=30;RPP=68.1545;RPPR=209.3;RPR=0;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=95;SRP=209.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:9,3:9:292:3:100:-5.71817,0,-22.985 0/0:12:12,0:12:403:0:0:0,-3.61236,-36.5938 0/0:23:23,0:23:730:0:0:0,-6.92369,-65.9989 0/1:17:12,5:12:381:5:167:-10.2418,0,-29.4817 0/1:26:4,22:4:132:22:742:-59.2677,0,-4.37962 0/0:35:35,0:35:1131:0:0:0,-10.536,-102.087 dDocent_Contig_10271 98 . N A 62.694 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=66;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:66:-6.26831,-0.60206,0 dDocent_Contig_10272 196 . T G 64.651 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X1M1X3M1X3M1X1M5I2X;DP=5;DPB=6.92857;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=12.6;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=8;PRO=1;QA=193;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:1:0,1:0:0:1:38:-1.89463,-0.30103,0 .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:77:-1.99867,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:78:-2.0888,-0.60206,0 dDocent_Contig_10273 98 . N C 186.193 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=186;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:56:-5.3191,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:2:0,2:0:0:2:60:-5.69918,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10274 23 . G A 35.4766 . AB=0.2;ABP=10.8276;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=1X;DP=87;DPB=87;DPRA=0.649351;EPP=7.35324;EPPR=185.414;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.809524;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=3289;RO=84;RPL=0;RPP=7.35324;RPPR=185.414;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=84;SRP=185.414;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:10:8,2:8:318:2:82:-4.76938,0,-25.9752 0/0:16:15,0:15:610:0:0:0,-4.51545,-54.8286 0/0:7:7,0:7:281:0:0:0,-2.10721,-25.6604 0/0:26:26,0:26:1029:0:0:0,-7.82678,-92.9051 0/0:17:17,0:17:644:0:0:0,-5.11751,-58.2744 0/0:11:11,0:11:407:0:0:0,-3.31133,-36.9703 dDocent_Contig_10275 36 . T A 3715.59 . AB=0.637755;ABP=35.3165;AC=6;AF=0.5;AN=12;AO=125;CIGAR=1X;DP=196;DPB=196;DPRA=0;EPP=274.444;EPPR=157.185;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.808;PAIREDR=0.802817;PAO=0;PQA=0;PQR=0;PRO=0;QA=4888;QR=2823;RO=71;RPL=0;RPP=274.444;RPPR=157.185;RPR=125;RUN=1;SAF=125;SAP=274.444;SAR=0;SRF=71;SRP=157.185;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:44:14,30:14:565:30:1178:-93.0511,0,-37.9461 0/1:32:17,15:17:682:15:550:-40.184,0,-52.0767 0/1:30:10,20:10:394:20:790:-62.3899,0,-26.7864 0/1:31:13,18:13:521:18:726:-56.3326,0,-37.9003 0/1:33:13,20:13:508:20:792:-61.6641,0,-36.1286 0/1:26:4,22:4:153:22:852:-69.1596,0,-6.31234 dDocent_Contig_10276 17 . G A 99.3339 . AB=0.130435;ABP=112.15;AC=4;AF=0.333333;AN=12;AO=12;CIGAR=1X;DP=132;DPB=132;DPRA=1.15;EPP=29.068;EPPR=263.587;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.833333;PAO=0;PQA=0;PQR=0;PRO=0;QA=481;QR=4751;RO=120;RPL=0;RPP=29.068;RPPR=263.587;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=120;SRP=263.587;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:9:7,2:7:252:2:82:-5.07041,0,-20.3044 0/1:15:13,2:13:529:2:78:-2.88733,0,-43.4412 0/0:21:21,0:21:839:0:0:0,-6.32163,-75.824 0/1:34:30,4:30:1206:4:158:-4.36434,0,-98.58 0/0:19:19,0:19:760:0:0:0,-5.71957,-68.7224 0/1:34:30,4:30:1165:4:163:-4.82341,0,-94.8935 dDocent_Contig_10277 10 . A C 52.8752 . AB=0.25;ABP=11.6962;AC=2;AF=0.166667;AN=12;AO=4;CIGAR=3X;DP=44;DPB=44;DPRA=1.14286;EPP=11.6962;EPPR=89.8692;GTI=0;LEN=1;MEANALT=1;MQM=32;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=154;QR=1547;RO=40;RPL=0;RPP=11.6962;RPPR=89.8692;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=40;SRP=89.8692;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:10:9,1:9:342:1:40:-0.125846,0,-28.1211 0|0:9:9,0:9:347:0:0:0,-2.70927,-31.5872 0|0:6:6,0:6:237:0:0:0,-1.80618,-21.7031 0|0:10:10,0:10:389:0:0:0,-3.0103,-35.3638 0|0:3:3,0:3:120:0:0:0,-0.90309,-11.1879 0|1:6:3,3:3:112:3:114:-6.80933,0,-8.63982 dDocent_Contig_10278 15 . C T 115.865 . AB=0.166667;ABP=43.5445;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=344;DPB=344;DPRA=1.09756;EPP=26.8965;EPPR=726.111;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.818182;PAIREDR=0.951952;PAO=0;PQA=0;PQR=0;PRO=0;QA=444;QR=13300;RO=333;RPL=0;RPP=26.8965;RPPR=726.111;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=333;SRP=726.111;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1409:0:0:0,-10.536,-127.063 0/1:42:35,7:35:1406:7:282:-13.1093,0,-114.149 0/0:39:39,0:39:1579:0:0:0,-11.7402,-142.34 0/0:37:35,2:35:1402:2:82:0,-3.35843,-118.653 0/0:90:90,0:90:3563:0:0:0,-27.0927,-320.689 0/0:101:99,2:99:3941:2:80:0,-22.8125,-347.087 dDocent_Contig_10279 36 . T C 1875 . AB=0.27907;ABP=39.4708;AC=6;AF=0.5;AN=12;AO=61;CIGAR=1X;DP=233;DPB=233;DPRA=0.559091;EPP=135.47;EPPR=376.504;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2392;QR=5984;RO=172;RPL=0;RPP=135.47;RPPR=376.504;RPR=61;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=172;SRP=376.504;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:65:65,0:65:2237:0:0:0,-19.5669,-201.58 0/1:51:42,9:42:1477:9:330:-14.6872,0,-117.863 0/0:45:45,0:45:1597:0:0:0,-13.5463,-144.016 0/1:35:20,15:20:673:15:589:-42.8148,0,-50.3429 1/1:12:0,12:0:0:12:483:-43.8207,-3.61236,0 1/1:25:0,25:0:0:25:990:-89.3986,-7.52575,0 dDocent_Contig_10280 8 . T C 342.344 . AB=0.173228;ABP=120.8;AC=4;AF=0.333333;AN=12;AO=23;CIGAR=1X;DP=182;DPB=182;DPRA=5;EPP=52.9542;EPPR=348.274;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.7484;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.981132;PAO=0;PQA=0;PQR=0;PRO=0;QA=890;QR=6090;RO=159;RPL=0;RPP=52.9542;RPPR=348.274;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=159;SRP=348.274;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:16,7:16:612:7:269:-17.6505,0,-48.4919 0/1:42:36,6:36:1390:6:234:-8.78784,0,-112.738 0/0:7:7,0:7:267:0:0:0,-2.10721,-24.393 0/1:23:21,2:21:804:2:77:-0.385452,0,-65.4284 0/0:48:47,1:47:1822:1:39:0,-10.5529,-160.331 0/1:39:32,7:32:1195:7:271:-13.0161,0,-96.1023 dDocent_Contig_10281 19 . A T 36.2786 . AB=0.125;ABP=42.0968;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=260;DPB=260;DPRA=0.954887;EPP=18.2106;EPPR=552.393;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=58.6324;NS=6;NUMALT=1;ODDS=0;PAIRED=0.142857;PAIREDR=0.486166;PAO=0;PQA=0;PQR=0;PRO=0;QA=283;QR=9983;RO=253;RPL=0;RPP=18.2106;RPPR=552.393;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=253;SRP=552.393;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:33,2:33:1319:2:82:0,-2.75637,-106.123 0/0:66:66,0:66:2611:0:0:0,-19.868,-235.094 0/0:40:40,0:40:1569:0:0:0,-12.0412,-141.168 0/0:60:59,1:59:2320:1:41:0,-13.9672,-198.986 0/0:27:27,0:27:1068:0:0:0,-8.12781,-96.4076 0/1:32:28,4:28:1096:4:160:-5.15063,0,-87.128 dDocent_Contig_10283 18 . G A 2754.33 . AB=0.213592;ABP=443.334;AC=4;AF=0.333333;AN=12;AO=134;CIGAR=1X;DP=2101;DPB=2101;DPRA=0;EPP=293.988;EPPR=4265.61;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5279;QR=77414;RO=1963;RPL=0;RPP=293.988;RPPR=4265.61;RPR=134;RUN=1;SAF=134;SAP=293.988;SAR=0;SRF=1963;SRP=4265.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:61:31,30:31:1225:30:1169:-87.1243,0,-92.1627 0/1:190:149,41:149:5931:41:1614:-88.3029,0,-476.401 0/1:175:140,34:140:5453:34:1332:-67.3576,0,-437.84 0/1:192:165,27:165:6476:27:1082:-39.8703,0,-524.808 0/0:791:789,1:789:31239:1:41:0,-234.124,-2804.71 0/0:692:689,1:689:27090:1:41:0,-204.016,-2431.73 dDocent_Contig_10284 35 . T A 111.901 . AB=0.294118;ABP=9.26925;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=137;DPB=137;DPRA=0.708333;EPP=13.8677;EPPR=289.645;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.863636;PAO=0;PQA=0;PQR=0;PRO=0;QA=194;QR=5184;RO=132;RPL=0;RPP=13.8677;RPPR=289.645;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=132;SRP=289.645;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:5:5,0:5:196:0:0:0,-1.50515,-18.0143 0/0:13:13,0:13:480:0:0:0,-3.91339,-43.526 0/1:17:12,5:12:472:5:194:-12.713,0,-37.7101 0/0:18:18,0:18:725:0:0:0,-5.41854,-65.5755 0/0:52:52,0:52:2064:0:0:0,-15.6536,-185.948 0/0:32:32,0:32:1247:0:0:0,-9.63296,-112.495 dDocent_Contig_10285 118 . G A 33.6209 . AB=0.142857;ABP=34.0313;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=126;DPB=126;DPRA=1.42857;EPP=11.6962;EPPR=267.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=144;QR=4278;RO=122;RPL=0;RPP=11.6962;RPPR=267.93;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=267.93;SRR=122;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:39,0:39:1374:0:0:0,-11.7402,-123.959 0/0:22:22,0:22:770:0:0:0,-6.62266,-69.6202 0/0:17:17,0:17:564:0:0:0,-5.11751,-51.0695 0/1:28:24,4:24:857:4:144:-4.88478,0,-69.0229 0/0:9:9,0:9:322:0:0:0,-2.70927,-29.3242 0/0:11:11,0:11:391:0:0:0,-3.31133,-35.5296 dDocent_Contig_10286 13 . G A 252.206 . AB=0.184211;ABP=68.8402;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=181;DPB=181;DPRA=1.51111;EPP=39.9253;EPPR=359.132;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=681;QR=6470;RO=164;RPL=0;RPP=39.9253;RPPR=359.132;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=164;SRP=359.132;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:22,9:22:886:9:363:-23.7012,0,-70.7149 0/0:33:31,2:31:1220:2:81:0,-2.24826,-102.385 0/1:45:40,5:40:1579:5:199:-4.74109,0,-128.8 0/0:27:26,1:26:1018:1:38:0,-4.33054,-88.1189 0/0:24:24,0:24:957:0:0:0,-7.22472,-86.4265 0/0:21:21,0:21:810:0:0:0,-6.32163,-73.2085 dDocent_Contig_10287 31 . A G 2195.02 . AB=0.458824;ABP=5.51388;AC=6;AF=0.5;AN=12;AO=78;CIGAR=1X4M;DP=170;DPB=170;DPRA=0;EPP=172.385;EPPR=198.443;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=0.5;PAIREDR=0.577778;PAO=0;PQA=0;PQR=0;PRO=0;QA=3107;QR=3529;RO=90;RPL=0;RPP=172.385;RPPR=198.443;RPR=78;RUN=1;SAF=78;SAP=172.385;SAR=0;SRF=90;SRP=198.443;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:30:16,2,12:16:627:2,12:80,486:-35.2623,-33.4893,-84.4326,0,-44.9545,-47.9332 0|1:37:17,0,20:17:683:0,20:0,801:-61.2682,-66.3857,-122.669,0,-56.6841,-50.6635 0|1:26:16,0,10:16:621:0,10:0,402:-28.7127,-33.5292,-84.5386,0,-51.4057,-48.3954 0|1:33:12,0,21:12:464:0,21:0,834:-65.4331,-69.0455,-107.146,0,-38.491,-32.1694 0|1:16:13,0,3:13:519:0,3:0,122:-6.55601,-10.4694,-53.2088,0,-43.1442,-42.2411 0|1:28:16,0,12:16:615:0,12:0,462:-33.491,-38.3075,-88.7811,0,-50.8579,-47.2456 dDocent_Contig_10288 58 . T C 618.021 . AB=0.383333;ABP=10.1038;AC=3;AF=0.25;AN=12;AO=23;CIGAR=1X;DP=94;DPB=94;DPRA=1.76471;EPP=52.9542;EPPR=157.185;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=933;QR=2802;RO=71;RPL=23;RPP=52.9542;RPPR=157.185;RPR=0;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=71;SRP=157.185;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:5:5,0:5:205:0:0:0,-1.50515,-18.835 0/1:24:14,10:14:561:10:402:-29.3149,0,-43.6079 0/1:12:10,2:10:385:2:82:-4.16732,0,-31.3922 0/1:24:13,11:13:513:11:449:-33.5412,0,-39.2902 0/0:11:11,0:11:439:0:0:0,-3.31133,-39.8652 0/0:18:18,0:18:699:0:0:0,-5.41854,-63.2332 dDocent_Contig_10289 17 . G A 325.051 . AB=0.818182;ABP=12.6832;AC=3;AF=0.25;AN=12;AO=10;CIGAR=1X;DP=75;DPB=75;DPRA=0.380952;EPP=24.725;EPPR=144.156;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=403;QR=2618;RO=65;RPL=0;RPP=24.725;RPPR=144.156;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=65;SRP=144.156;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:358:0:0:0,-2.70927,-32.5809 0/0:30:30,0:30:1206:0:0:0,-9.0309,-108.813 0/0:15:15,0:15:605:0:0:0,-4.51545,-54.7876 0/0:9:9,0:9:368:0:0:0,-2.70927,-33.4854 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 0/1:11:2,9:2:81:9:362:-29.6317,0,-4.3744 dDocent_Contig_10290 21 . T A 2887.49 . AB=0.505208;ABP=3.05554;AC=2;AF=0.166667;AN=12;AO=97;CIGAR=1X;DP=308;DPB=308;DPRA=3.31034;EPP=213.643;EPPR=459.02;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995238;PAO=0;PQA=0;PQR=0;PRO=0;QA=3882;QR=8396;RO=210;RPL=0;RPP=213.643;RPPR=459.02;RPR=97;RUN=1;SAF=97;SAP=213.643;SAR=0;SRF=210;SRP=459.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:22,0:22:897:0:0:0,-6.62266,-80.7396 0/0:29:29,0:29:1146:0:0:0,-8.72987,-103.421 0/0:30:30,0:30:1176:0:0:0,-9.0309,-106.112 0/0:34:34,0:34:1383:0:0:0,-10.235,-124.719 0/1:115:53,62:53:2109:62:2471:-187.912,0,-155.37 0/1:77:42,35:42:1685:35:1411:-104.058,0,-128.694 dDocent_Contig_10291 17 . C A 2930.8 . AB=0.0909091;ABP=194.889;AC=0;AF=0;AN=12;AO=12;CIGAR=2X1M;DP=291;DPB=291;DPRA=0;EPP=29.068;EPPR=361.303;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.75;PAIREDR=0.630303;PAO=0;PQA=0;PQR=0;PRO=0;QA=480;QR=6498;RO=165;RPL=0;RPP=29.068;RPPR=361.303;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=165;SRP=361.303;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:44:11,5,7,21:11:421:5,7,21:202,280,841:-65.9683,-52.6259,-85.6597,-46.2166,-64.1006,-78.6479,0,-17.8786,-11.4685,-28.2133 0|0:55:38,0,0,17:38:1510:0,0,17:0,0,659:-43.0757,-54.5148,-178.836,-54.5148,-178.836,-178.836,0,-124.712,-124.712,-119.594 0|0:39:13,0,3,23:13:512:0,3,23:0,119,898:-69.8791,-73.7925,-115.914,-63.9966,-106.118,-105.215,0,-42.1179,-32.3222,-35.1942 0|0:49:28,0,2,18:28:1091:0,2,18:0,81,722:-51.0642,-59.4931,-149.148,-52.8134,-142.469,-141.867,0,-89.6605,-82.9803,-84.2419 0|0:39:30,0,0,9:30:1189:0,0,9:0,0,368:-21.7452,-30.7761,-128.632,-30.7761,-128.632,-128.632,0,-98.261,-98.261,-95.5518 0|0:65:45,0,0,20:45:1775:0,0,20:0,0,798:-52.5692,-66.1155,-212.147,-66.1155,-212.147,-212.147,0,-146.429,-146.429,-140.408 dDocent_Contig_10292 57 . T A 1260.16 . AB=0.415929;ABP=9.94748;AC=3;AF=0.25;AN=12;AO=47;CIGAR=1X;DP=195;DPB=195;DPRA=1.37805;EPP=105.07;EPPR=322.217;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.87234;PAIREDR=0.496599;PAO=0;PQA=0;PQR=0;PRO=0;QA=1806;QR=5849;RO=147;RPL=47;RPP=105.07;RPPR=322.217;RPR=0;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=147;SRP=322.217;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:25,3:25:993:3:121:-2.85136,0,-81.2378 0/0:48:47,0:47:1843:0:0:0,-14.1484,-165.81 0/0:13:13,0:13:525:0:0:0,-3.91339,-47.597 0/1:28:25,3:25:1016:3:93:-0.248763,0,-83.3033 0/1:57:16,41:16:622:41:1592:-126.375,0,-39.1536 0/0:21:21,0:21:850:0:0:0,-6.32163,-76.8102 dDocent_Contig_10293 21 . A C 167.043 . AB=0.28;ABP=13.5202;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=152;DPB=152;DPRA=0.984252;EPP=18.2106;EPPR=317.874;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.951724;PAO=0;PQA=0;PQR=0;PRO=0;QA=282;QR=5817;RO=145;RPL=0;RPP=18.2106;RPPR=317.874;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=145;SRP=317.874;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:672:0:0:0,-5.11751,-60.8075 0/0:23:23,0:23:902:0:0:0,-6.92369,-81.4801 0/0:7:7,0:7:283:0:0:0,-2.10721,-25.843 0/1:25:18,7:18:730:7:282:-18.2272,0,-58.4991 0/0:37:37,0:37:1493:0:0:0,-11.1381,-134.61 0/0:43:43,0:43:1737:0:0:0,-12.9443,-156.54 dDocent_Contig_10294 23 . A T 547.749 . AB=0.21374;ABP=96.251;AC=2;AF=0.166667;AN=12;AO=29;CIGAR=1X;DP=340;DPB=340;DPRA=1.02381;EPP=65.983;EPPR=676.167;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.987097;PAO=0;PQA=0;PQR=0;PRO=0;QA=1113;QR=11983;RO=310;RPL=0;RPP=65.983;RPPR=676.167;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=310;SRP=676.167;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1631:0:0:0,-12.3422,-147.029 0/0:41:40,1:40:1555:1:40:0,-8.34655,-136.203 0/1:54:44,10:44:1709:10:379:-18.1972,0,-137.789 0/1:77:58,18:58:2263:18:694:-39.7995,0,-180.89 0/0:52:52,0:52:2020:0:0:0,-15.6536,-182.012 0/0:75:75,0:75:2805:0:0:0,-22.5772,-252.592 dDocent_Contig_10295 107 . N C 199.107 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=7;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0.857143;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=201;QR=0;RO=0;RPL=0;RPP=18.2106;RPPR=0;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:3:0,3:0:0:3:88:-8.21101,-0.90309,0 1/1:1:0,1:0:0:1:25:-2.49986,-0.30103,0 1/1:2:0,1:0:0:1:35:-3.1987,-0.30103,0 1/1:1:0,1:0:0:1:19:-1.89997,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_10296 1 . N G 1810.35 . AB=0.2625;ABP=81.4005;AC=12;AF=1;AN=12;AO=42;CIGAR=1X14M;DP=160;DPB=193.6;DPRA=0;EPP=94.2121;EPPR=0;GTI=0;LEN=1;MEANALT=8.16667;MQM=43.5238;MQMR=0;NS=6;NUMALT=10;ODDS=5.55112e-17;PAIRED=0;PAIREDR=0;PAO=23.6091;PQA=769.841;PQR=769.841;PRO=23.6091;QA=1307;QR=0;RO=0;RPL=0;RPP=94.2121;RPPR=0;RPR=42;RUN=1;SAF=0;SAP=94.2121;SAR=42;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:38:0,0,7,0,0,2,15,7,0,2,1:0:0:0,7,0,0,2,15,7,0,2,1:0,196,0,0,63,422,143,0,68,12:-44.3153,-44.3153,-44.3153,-29.5677,-29.5677,-27.4605,-44.3153,-44.3153,-29.5677,-44.3153,-44.3153,-44.3153,-29.5677,-44.3153,-44.3153,-39.3223,-39.3223,-24.5746,-39.3223,-39.3223,-38.7202,-14.7363,-14.7363,0,-14.7363,-14.7363,-9.74394,-10.2208,-34.8998,-34.8998,-20.1597,-34.8998,-34.8998,-29.9079,-5.34989,-32.7926,-44.3153,-44.3153,-29.5677,-44.3153,-44.3153,-39.3223,-14.7363,-34.8998,-44.3153,-38.7973,-38.7973,-24.0492,-38.7973,-38.7973,-33.804,-9.21779,-29.3826,-38.7973,-38.1952,-43.7998,-43.7998,-29.0536,-43.7998,-43.7998,-38.8071,-14.2252,-34.3863,-43.7998,-38.2821,-43.4988 1|1:26:0,0,0,3,0,0,4,6,0,2,9:0:0:0,0,3,0,0,4,6,0,2,9:0,0,88,0,0,114,126,0,67,276:-30.547,-30.547,-30.547,-30.547,-30.547,-30.547,-23.7028,-23.7028,-23.7028,-22.7997,-30.547,-30.547,-30.547,-23.7028,-30.547,-30.547,-30.547,-30.547,-23.7028,-30.547,-30.547,-22.5831,-22.5831,-22.5831,-15.7425,-22.5831,-22.5831,-21.3789,-21.8145,-21.8145,-21.8145,-14.9799,-21.8145,-21.8145,-13.8665,-20.0083,-30.547,-30.547,-30.547,-23.7028,-30.547,-30.547,-22.5831,-21.8145,-30.547,-25.122,-25.122,-25.122,-18.2784,-25.122,-25.122,-17.1595,-16.3941,-25.122,-24.5199,-8.6888,-8.6888,-8.6888,-1.85233,-8.6888,-8.6888,-0.740287,0,-8.6888,-3.26609,-5.97953 1|1:22:0,0,0,0,0,1,4,3,0,0,12:0:0:0,0,0,0,1,4,3,0,0,12:0,0,0,0,27,126,97,0,0,370:-38.2094,-38.2094,-38.2094,-38.2094,-38.2094,-38.2094,-38.2094,-38.2094,-38.2094,-38.2094,-38.2094,-38.2094,-38.2094,-38.2094,-38.2094,-36.3564,-36.3564,-36.3564,-36.3564,-36.3564,-36.0554,-29.1722,-29.1722,-29.1722,-29.1722,-29.1722,-27.3214,-27.968,-30.3928,-30.3928,-30.3928,-30.3928,-30.3928,-28.541,-21.36,-29.4897,-38.2094,-38.2094,-38.2094,-38.2094,-38.2094,-36.3564,-29.1722,-30.3928,-38.2094,-38.2094,-38.2094,-38.2094,-38.2094,-38.2094,-36.3564,-29.1722,-30.3928,-38.2094,-38.2094,-8.96623,-8.96623,-8.96623,-8.96623,-8.96623,-7.12722,0,-1.18388,-8.96623,-8.96623,-5.35387 1|1:37:0,0,1,0,5,3,4,1,0,0,11:0:0:0,1,0,5,3,4,1,0,0,11:0,35,0,150,71,115,14,0,0,358:-39.3448,-39.3448,-39.3448,-36.552,-36.552,-36.251,-39.3448,-39.3448,-36.552,-39.3448,-28.5249,-28.5249,-25.732,-28.5249,-27.0197,-34.4427,-34.4427,-31.65,-34.4427,-23.6243,-33.5396,-31.0653,-31.0653,-28.2725,-31.0653,-20.2466,-26.1646,-29.8612,-38.6541,-38.6541,-35.8614,-38.6541,-27.8351,-33.7526,-30.3754,-38.353,-39.3448,-39.3448,-36.552,-39.3448,-28.5249,-34.4427,-31.0653,-38.6541,-39.3448,-39.3448,-39.3448,-36.552,-39.3448,-28.5249,-34.4427,-31.0653,-38.6541,-39.3448,-39.3448,-10.8206,-10.8206,-8.02684,-10.8206,0,-5.92053,-2.54122,-10.1317,-10.8206,-10.8206,-7.50931 1|1:20:0,3,0,0,0,0,2,1,5,0,4:0:0:3,0,0,0,0,2,1,5,0,4:100,0,0,0,0,69,20,100,0,125:-17.6347,-10.0462,-9.14307,-17.6347,-10.0462,-17.6347,-17.6347,-10.0462,-17.6347,-17.6347,-17.6347,-10.0462,-17.6347,-17.6347,-17.6347,-17.6347,-10.0462,-17.6347,-17.6347,-17.6347,-17.6347,-12.0744,-4.48399,-12.0744,-12.0744,-12.0744,-12.0744,-11.4724,-16.1404,-8.55235,-16.1404,-16.1404,-16.1404,-16.1404,-10.5802,-15.8393,-11.5236,-3.94277,-11.5236,-11.5236,-11.5236,-11.5236,-5.96696,-10.0337,-10.0185,-17.6347,-10.0462,-17.6347,-17.6347,-17.6347,-17.6347,-12.0744,-16.1404,-11.5236,-17.6347,-7.59152,0,-7.59152,-7.59152,-7.59152,-7.59152,-2.02857,-6.09796,-1.49169,-7.59152,-6.3874 1|1:17:0,0,0,0,0,0,0,4,1,0,5:0:0:0,0,0,0,0,0,4,1,0,5:0,0,0,0,0,0,114,20,0,166:-22.1842,-22.1842,-22.1842,-22.1842,-22.1842,-22.1842,-22.1842,-22.1842,-22.1842,-22.1842,-22.1842,-22.1842,-22.1842,-22.1842,-22.1842,-22.1842,-22.1842,-22.1842,-22.1842,-22.1842,-22.1842,-22.1842,-22.1842,-22.1842,-22.1842,-22.1842,-22.1842,-22.1842,-13.2297,-13.2297,-13.2297,-13.2297,-13.2297,-13.2297,-13.2297,-12.0255,-20.9635,-20.9635,-20.9635,-20.9635,-20.9635,-20.9635,-20.9635,-12.0129,-20.6625,-22.1842,-22.1842,-22.1842,-22.1842,-22.1842,-22.1842,-22.1842,-13.2297,-20.9635,-22.1842,-8.94951,-8.94951,-8.94951,-8.94951,-8.94951,-8.94951,-8.94951,0,-7.73266,-8.94951,-7.44436 dDocent_Contig_10297 17 . A T 87.3879 . AB=0.162791;ABP=45.4803;AC=3;AF=0.25;AN=12;AO=8;CIGAR=1X;DP=101;DPB=101;DPRA=0.985294;EPP=20.3821;EPPR=204.957;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=323;QR=3717;RO=93;RPL=0;RPP=20.3821;RPPR=204.957;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=93;SRP=204.957;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:20,3:20:805:3:121:-4.3563,0,-65.8436 0/1:7:6,1:6:224:1:40:-1.88847,0,-18.4105 0/0:24:23,1:23:913:1:39:0,-3.32816,-78.5763 0/1:13:10,3:10:395:3:123:-7.5514,0,-31.9902 0/0:20:20,0:20:808:0:0:0,-6.0206,-73.035 0/0:14:14,0:14:572:0:0:0,-4.21442,-51.8216 dDocent_Contig_10298 23 . A G 200.839 . AB=0.22;ABP=37.059;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=189;DPB=189;DPRA=0.719424;EPP=26.8965;EPPR=389.532;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.348315;PAO=0;PQA=0;PQR=0;PRO=0;QA=418;QR=6865;RO=178;RPL=0;RPP=26.8965;RPPR=389.532;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=178;SRP=389.532;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:11:8,3:8:294:3:117:-7.59858,0,-23.4955 0/0:62:62,0:62:2371:0:0:0,-18.6639,-213.579 0/0:34:34,0:34:1330:0:0:0,-10.235,-119.972 0/1:39:31,8:31:1199:8:301:-15.7072,0,-96.4478 0/0:29:29,0:29:1129:0:0:0,-8.72987,-101.906 0/0:14:14,0:14:542:0:0:0,-4.21442,-49.1199 dDocent_Contig_10299 8 . T G 739.324 . AB=0.36;ABP=15.7786;AC=5;AF=0.5;AN=10;AO=30;CIGAR=1X;DP=110;DPB=110;DPRA=0;EPP=68.1545;EPPR=176.728;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0.9;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1154;QR=3081;RO=80;RPL=0;RPP=68.1545;RPPR=176.728;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=80;SRP=176.728;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:25,11:25:955:11:422:-27.4964,0,-75.4272 0/0:33:32,1:32:1234:1:39:0,-6.03743,-107.456 0/1:19:10,9:10:388:9:342:-25.4159,0,-29.5583 0/1:20:13,7:13:504:7:273:-18.9174,0,-39.6883 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:78:-7.40347,-0.60206,0 dDocent_Contig_10300 43 . T C 1771.78 . AB=0.266667;ABP=144.88;AC=5;AF=0.416667;AN=12;AO=87;CIGAR=1X;DP=392;DPB=392;DPRA=0;EPP=14.0174;EPPR=27.7936;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.436782;PAIREDR=0.406557;PAO=0;PQA=0;PQR=0;PRO=0;QA=3302;QR=11458;RO=305;RPL=0;RPP=191.928;RPPR=665.309;RPR=87;RUN=1;SAF=54;SAP=14.0174;SAR=33;SRF=182;SRP=27.7936;SRR=123;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:57:51,6:51:1929:6:211:-2.1636,0,-156.672 0/1:86:63,23:63:2361:23:885:-54.073,0,-186.799 0/1:48:23,25:23:897:25:952:-71.5285,0,-66.5865 0/1:55:36,19:36:1344:19:741:-50.454,0,-104.677 0/1:54:47,7:47:1777:7:267:-8.13421,0,-143.916 0/0:92:85,7:85:3150:7:246:0,-5.21468,-261.145 dDocent_Contig_10301 76 . G T 69.639 . AB=0.166667;ABP=37.7539;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=181;DPB=181;DPRA=0.496552;EPP=16.0391;EPPR=383.018;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994286;PAO=0;PQA=0;PQR=0;PRO=0;QA=221;QR=6214;RO=175;RPL=6;RPP=16.0391;RPPR=383.018;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=175;SRP=383.018;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1155:0:0:0,-9.93399,-104.257 0/0:50:50,0:50:1771:0:0:0,-15.0515,-159.674 0/0:34:34,0:34:1231:0:0:0,-10.235,-111.093 0/0:28:28,0:28:978:0:0:0,-8.42884,-88.3251 0/1:19:17,2:17:622:2:74:-1.30631,0,-50.5953 0/1:17:13,4:13:457:4:147:-8.47237,0,-36.3429 dDocent_Contig_10302 129 . G A 300.641 . AB=0.333333;ABP=11.6962;AC=1;AF=0.1;AN=10;AO=13;CIGAR=1X;DP=72;DPB=72;DPRA=2.82;EPP=31.2394;EPPR=131.127;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=473;QR=2271;RO=59;RPL=0;RPP=31.2394;RPPR=131.127;RPR=13;RUN=1;SAF=0;SAP=31.2394;SAR=13;SRF=0;SRP=131.127;SRR=59;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:24,12:24:927:12:465:-31.3649,0,-72.9096 0/0:12:12,0:12:465:0:0:0,-3.61236,-42.2016 0/0:11:10,1:10:387:1:8:0,-2.51133,-34.3875 0/0:2:2,0:2:78:0:0:0,-0.60206,-7.40347 0/0:11:11,0:11:414:0:0:0,-3.31133,-37.6078 ./.:.:.:.:.:.:.:. dDocent_Contig_10304 37 . C A 503.125 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=320;DPB=320;DPRA=0.228758;EPP=33.4109;EPPR=667.481;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=550;QR=12216;RO=306;RPL=0;RPP=33.4109;RPPR=667.481;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=306;SRP=667.481;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:812:0:0:0,-6.32163,-73.3909 0/0:112:112,0:112:4484:0:0:0,-33.7154,-403.485 0/0:56:56,0:56:2235:0:0:0,-16.8577,-201.318 0/0:57:57,0:57:2285:0:0:0,-17.1587,-205.814 1/1:14:0,14:0:0:14:550:-49.8353,-4.21442,0 0/0:60:60,0:60:2400:0:0:0,-18.0618,-216.15 dDocent_Contig_10307 30 . A G 551.996 . AB=0.184524;ABP=148.24;AC=2;AF=0.166667;AN=12;AO=37;CIGAR=1X;DP=337;DPB=337;DPRA=1.17551;EPP=83.3548;EPPR=654.452;GTI=0;LEN=1;MEANALT=1;MQM=52.1892;MQMR=59.9267;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.366667;PAO=0;PQA=0;PQR=0;PRO=0;QA=1457;QR=11854;RO=300;RPL=0;RPP=83.3548;RPPR=654.452;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=300;SRP=654.452;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:49:49,0:49:1960:0:0:0,-14.7505,-176.599 0/0:35:34,1:34:1333:1:41:0,-6.53337,-116.227 0/1:14:11,3:11:417:3:122:-7.15443,0,-33.653 0/0:27:26,1:26:1021:1:41:0,-4.03464,-88.0854 0/1:154:126,28:126:4987:28:1092:-51.267,0,-402.378 0/0:58:54,4:54:2136:4:161:0,-2.68402,-177.218 dDocent_Contig_10309 30 . T C 1664.34 . AB=0.348387;ABP=33.9573;AC=8;AF=0.666667;AN=12;AO=54;CIGAR=1X1M;DP=155;DPB=155;DPRA=0;EPP=111.745;EPPR=200.614;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.462963;PAIREDR=0.571429;PAO=0;PQA=0;PQR=0;PRO=0;QA=2128;QR=3456;RO=91;RPL=0;RPP=120.27;RPPR=200.614;RPR=54;RUN=1;SAF=53;SAP=111.745;SAR=1;SRF=91;SRP=200.614;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:32:23,0,9:23:855:0,9:0,356:-22.766,-29.6897,-99.6343,0,-70.3331,-67.6238 0|1:36:25,0,11:25:947:0,11:0,414:-26.7537,-34.2795,-111.905,0,-78.0027,-74.6913 0|1:30:23,0,7:23:875:0,7:0,285:-16.9933,-23.917,-95.6492,0,-72.1327,-70.0254 0|1:31:19,0,12:19:740:0,12:0,473:-33.5875,-39.307,-100.124,0,-61.2088,-57.5964 1|1:13:1,6,6:1:39:6,6:230,242:-35.3188,-16.7547,-18.1525,-15.6624,0,-17.0631 1|1:13:0,4,9:0:0:4,9:151,358:-42.2367,-29.8703,-28.6662,-12.7498,0,-10.0405 dDocent_Contig_10310 37 . G T 58.9141 . AB=0.147059;ABP=39.7976;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X1M2X;DP=174;DPB=174;DPRA=1.71875;EPP=20.3821;EPPR=359.132;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.875;PAIREDR=0.743902;PAO=0;PQA=0;PQR=0;PRO=0;QA=307;QR=6385;RO=164;RPL=0;RPP=20.3821;RPPR=359.132;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=164;SRP=359.132;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:33:32,0:32:1242:0:0:0,-9.63296,-111.969 0|0:33:31,2:31:1218:2:75:0,-2.81389,-102.785 0|1:34:29,5:29:1144:5:192:-7.41428,0,-93.0146 0|0:43:42,1:42:1628:1:40:0,-8.94861,-142.774 0|0:13:13,0:13:513:0:0:0,-3.91339,-46.5151 0|0:18:17,0:17:640:0:0:0,-5.11751,-57.7597 dDocent_Contig_10311 59 . T C 128.303 . AB=0.142857;ABP=80.5629;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=228;DPB=228;DPRA=0.886076;EPP=24.725;EPPR=476.391;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.7;PAIREDR=0.633028;PAO=0;PQA=0;PQR=0;PRO=0;QA=404;QR=8605;RO=218;RPL=10;RPP=24.725;RPPR=476.391;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=218;SRP=476.391;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:31,0:31:1208:0:0:0,-9.33193,-108.986 0/0:33:33,0:33:1308:0:0:0,-9.93399,-117.988 0/0:51:51,0:51:2045:0:0:0,-15.3525,-184.238 0/0:43:43,0:43:1660:0:0:0,-12.9443,-149.626 0/1:30:26,4:26:1030:4:163:-6.02753,0,-83.9672 0/1:40:34,6:34:1354:6:241:-10.0246,0,-110.081 dDocent_Contig_10312 54 . G T 5152.37 . AB=0.584775;ABP=21.0508;AC=6;AF=0.5;AN=12;AO=169;CIGAR=6M1X4M;DP=289;DPB=290;DPRA=0;EPP=369.989;EPPR=228.843;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.863905;PAIREDR=0.951923;PAO=0;PQA=0;PQR=0;PRO=0;QA=6764;QR=3982;RO=104;RPL=169;RPP=369.989;RPPR=228.843;RPR=0;RUN=1;SAF=169;SAP=369.989;SAR=0;SRF=104;SRP=228.843;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:32:11,2,19:11:427:2,19:78,765:-59.7487,-56.6495,-91.1267,0,-28.6709,-29.3634 0|1:50:23,1,25:23:901:1,25:36,1006:-76.0412,-80.0289,-153.814,0,-71.2052,-66.6157 0|1:51:26,7,17:26:1018:7,17:262,694:-49.4801,-35.8572,-117.456,0,-62.2902,-78.6259 0|1:36:13,0,23:13:466:0,23:0,905:-70.91,-74.8234,-112.806,0,-38.3535,-31.4299 0|1:52:15,1,35:15:562:1,35:41,1402:-110.971,-112.102,-157.817,0,-42.6111,-35.4611 0|1:68:16,0,50:16:608:0,50:0,1992:-159.308,-164.124,-213.98,0,-49.9387,-34.8872 dDocent_Contig_10313 16 . A C 66.7358 . AB=0.15625;ABP=35.8538;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=238;DPB=238;DPRA=1.01266;EPP=16.0391;EPPR=506.792;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.666667;PAIREDR=0.573276;PAO=0;PQA=0;PQR=0;PRO=0;QA=234;QR=9180;RO=232;RPL=0;RPP=16.0391;RPPR=506.792;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=232;SRP=506.792;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1085:0:0:0,-8.12781,-97.9367 0/0:48:47,1:47:1818:1:40:0,-10.4538,-159.834 0/0:40:40,0:40:1624:0:0:0,-12.0412,-146.385 0/1:32:27,5:27:1077:5:194:-8.19646,0,-87.5859 0/0:51:51,0:51:2007:0:0:0,-15.3525,-180.831 0/0:40:40,0:40:1569:0:0:0,-12.0412,-141.449 dDocent_Contig_10314 75 . T C 2060.34 . AB=0.660377;ABP=26.6916;AC=3;AF=0.25;AN=12;AO=70;CIGAR=1X;DP=139;DPB=139;DPRA=3.21212;EPP=155.013;EPPR=152.842;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.927536;PAO=0;PQA=0;PQR=0;PRO=0;QA=2692;QR=2722;RO=69;RPL=70;RPP=155.013;RPPR=152.842;RPR=0;RUN=1;SAF=70;SAP=155.013;SAR=0;SRF=69;SRP=152.842;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:361:0:0:0,-2.70927,-32.854 0/0:18:18,0:18:687:0:0:0,-5.41854,-62.15 0/0:6:6,0:6:244:0:0:0,-1.80618,-22.3388 0/1:9:6,3:6:238:3:110:-7.55074,0,-19.0847 0/1:54:22,32:22:884:32:1212:-93.0865,0,-63.6132 0/1:43:8,35:8:308:35:1370:-110.618,0,-15.1348 dDocent_Contig_10315 12 . A G 1283.4 . AB=0.288889;ABP=72.6904;AC=4;AF=0.333333;AN=12;AO=55;CIGAR=1X;DP=232;DPB=232;DPRA=2.12;EPP=122.441;EPPR=387.361;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2191;QR=7030;RO=177;RPL=0;RPP=122.441;RPPR=387.361;RPR=55;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=177;SRP=387.361;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:29,3:29:1146:3:98:0,-0.493564,-94.283 0/1:46:32,14:32:1273:14:561:-36.9845,0,-100.994 0/1:74:48,26:48:1894:26:1055:-72.9624,0,-148.391 0/1:45:35,10:35:1389:10:400:-22.8104,0,-111.723 0/0:20:20,0:20:801:0:0:0,-6.0206,-72.4093 0/1:15:13,2:13:527:2:77:-2.79275,0,-43.2613 dDocent_Contig_10316 11 . G A 1157.04 . AB=0.075;ABP=316.788;AC=6;AF=0.5;AN=12;AO=15;CIGAR=1X1M;DP=302;DPB=302;DPRA=0;EPP=35.5824;EPPR=498.106;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.6;PAIREDR=0.517544;PAO=0;PQA=0;PQR=0;PRO=0;QA=580;QR=8828;RO=228;RPL=0;RPP=35.5824;RPPR=498.106;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=228;SRP=498.106;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:48:29,12,7:29:1127:12,7:471,273:-30.0053,0,-88.9889,-16.2985,-70.1634,-106.791 0|1:70:47,22,1:47:1817:22,1:871,33:-57.5936,0,-142.667,-69.0767,-146.623,-218.004 0|1:45:36,5,4:36:1398:5,4:205,155:-6.09576,0,-113.362,-4.21219,-102.137,-117.856 0|1:37:31,3,3:31:1179:3,3:114,119:-0.472013,-0.463037,-96.2372,0,-87.3432,-95.7892 0|1:50:45,5,0:45:1751:5,0:197,0:-3.05432,0,-142.784,-16.6007,-144.289,-160.497 0|1:52:40,12,0:40:1556:12,0:483,0:-28.1678,0,-124.647,-40.209,-128.259,-168.069 dDocent_Contig_10318 20 . A C 168.269 . AB=0.112299;ABP=247.156;AC=2;AF=0.166667;AN=12;AO=27;CIGAR=1X;DP=1114;DPB=1114;DPRA=0.309048;EPP=61.6401;EPPR=2363.4;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1071;QR=42963;RO=1087;RPL=0;RPP=61.6401;RPPR=2363.4;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=1087;SRP=2363.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:91:83,8:83:3234:8:314:-1.23,0,-263.757 0/1:96:83,13:83:3286:13:521:-18.3377,0,-266.913 0/0:49:49,0:49:1925:0:0:0,-14.7505,-173.453 0/0:76:70,6:70:2797:6:236:0,-1.26837,-230.228 0/0:437:437,0:437:17303:0:0:0,-131.55,-1555.92 0/0:365:365,0:365:14418:0:0:0,-109.876,-1296.56 dDocent_Contig_10319 192 . T A 39.7404 . AB=0.173913;ABP=24.253;AC=2;AF=0.166667;AN=12;AO=4;CIGAR=1X;DP=48;DPB=48;DPRA=1.84;EPP=11.6962;EPPR=98.5551;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=38.5909;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=161;QR=1725;RO=44;RPL=4;RPP=11.6962;RPPR=98.5551;RPR=0;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=98.5551;SRR=44;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:6:6,0:6:233:0:0:0,-1.80618,-19.9068 0/0:8:8,0:8:310:0:0:0,-2.40824,-21.3808 0/1:16:14,2:14:555:2:82:-2.30114,0,-41.8342 0/1:7:5,2:5:195:2:79:-4.85981,0,-14.6188 0/0:6:6,0:6:237:0:0:0,-1.80618,-20.1781 0/0:5:5,0:5:195:0:0:0,-1.50515,-16.7617 dDocent_Contig_10320 33 . G A 39.0268 . AB=0.125;ABP=42.0968;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=259;DPB=259;DPRA=0.918519;EPP=20.3821;EPPR=548.05;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.625;PAIREDR=0.553785;PAO=0;PQA=0;PQR=0;PRO=0;QA=326;QR=10083;RO=251;RPL=0;RPP=20.3821;RPPR=548.05;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=251;SRP=548.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:38,0:38:1538:0:0:0,-11.4391,-138.656 0/1:32:28,4:28:1123:4:163:-5.42547,0,-91.7219 0/0:30:28,2:28:1126:2:82:0,-1.25122,-93.8393 0/0:62:60,2:60:2416:2:81:0,-10.9781,-209.894 0/0:34:34,0:34:1352:0:0:0,-10.235,-121.941 0/0:63:63,0:63:2528:0:0:0,-18.9649,-227.652 dDocent_Contig_10321 98 . N C 141.534 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=142;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:100:-9.33037,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10322 39 . A T 879.595 . AB=0.186047;ABP=223.894;AC=4;AF=0.333333;AN=12;AO=48;CIGAR=1X;DP=425;DPB=425;DPRA=0.772455;EPP=107.241;EPPR=821.655;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.9375;PAIREDR=0.787798;PAO=0;PQA=0;PQR=0;PRO=0;QA=1905;QR=14752;RO=377;RPL=0;RPP=107.241;RPPR=821.655;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=377;SRP=821.655;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:67:53,14:53:2112:14:542:-28.9478,0,-170.094 0/1:81:62,19:62:2431:19:764:-44.6986,0,-194.574 0/1:53:45,8:45:1721:8:318:-13.0315,0,-139.161 0/1:57:50,7:50:1934:7:281:-8.50347,0,-157.102 0/0:77:77,0:77:3045:0:0:0,-23.1793,-274.145 0/0:90:90,0:90:3509:0:0:0,-27.0927,-315.856 dDocent_Contig_10323 117 . A G 146.154 . AB=0.275;ABP=20.5992;AC=3;AF=0.25;AN=12;AO=12;CIGAR=1X;DP=128;DPB=128;DPRA=0.414286;EPP=29.068;EPPR=254.901;GTI=0;LEN=1;MEANALT=1;MQM=47.8333;MQMR=57.0172;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.982759;PAO=0;PQA=0;PQR=0;PRO=0;QA=380;QR=3402;RO=116;RPL=0;RPP=29.068;RPPR=254.901;RPR=12;RUN=1;SAF=0;SAP=29.068;SAR=12;SRF=0;SRP=254.901;SRR=116;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:4:3,1:3:95:1:35:-2.2444,0,-7.66061 0/1:26:22,4:22:644:4:132:-4.28611,0,-50.364 0/0:18:17,1:17:498:1:35:0,-1.93206,-38.7848 0/0:36:36,0:36:1050:0:0:0,-10.8371,-94.2687 0/1:10:4,6:4:83:6:178:-13.2662,0,-3.96672 0/0:34:34,0:34:1032:0:0:0,-10.235,-93.1634 dDocent_Contig_10324 15 . C G 2470.55 . AB=0.102564;ABP=56.5176;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X2M1X2M1X;DP=168;DPB=168;DPRA=0.517699;EPP=5.18177;EPPR=187.585;GTI=0;LEN=1;MEANALT=2;MQM=46;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.5;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=150;QR=3345;RO=85;RPL=0;RPP=11.6962;RPPR=187.585;RPR=4;RUN=1;SAF=3;SAP=5.18177;SAR=1;SRF=85;SRP=187.585;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:16:13,0,3:13:502:0,3:0,121:-6.46372,-10.3771,-51.5903,0,-41.6129,-40.7098 0|1:12:10,2,0:10:396:2,0:70,0:-3.03476,0,-32.387,-6.04506,-32.9891,-38.6766 0|0:47:42,0,4:42:1669:0,4:0,139:0,-12.6433,-150.088,-1.40515,-138.828,-137.624 0|0:27:20,2,4:20:778:2,4:80,155:-6.78887,-7.77103,-71.1491,0,-59.0224,-62.8559 0|0:28:0,0,28:0:0:0,28:0,1117:-100.56,-100.56,-100.56,-8.42884,-8.42884,0 0|0:38:0,0,38:0:0:0,38:0,1502:-135.422,-135.422,-135.422,-11.4391,-11.4391,0 dDocent_Contig_10325 12 . C T 1189.24 . AB=0.180769;ABP=233.153;AC=6;AF=0.5;AN=12;AO=47;CIGAR=1X5M9I2M1X;DP=260;DPB=275.889;DPRA=0;EPP=105.07;EPPR=159.356;GTI=0;LEN=1;MEANALT=3.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.851064;PAIREDR=0.916667;PAO=0;PQA=0;PQR=0;PRO=0;QA=1846;QR=2828;RO=72;RPL=0;RPP=105.07;RPPR=159.356;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=72;SRP=159.356;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:47:9,7:9:348:7:271:-19.549,0,-26.4706 0|1:45:12,4:12:473:4:151:-8.75903,0,-37.71 0|1:48:6,10:6:239:10:382:-29.5291,0,-16.6705 0|1:43:10,14:10:400:14:560:-43.1247,0,-28.7392 0|1:36:19,6:19:751:6:240:-14.05,0,-59.9908 0|1:41:16,6:16:617:6:242:-15.1339,0,-48.8516 dDocent_Contig_10326 62 . T C 88.3109 . AB=0.145455;ABP=63.0614;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=185;DPB=185;DPRA=0.796117;EPP=24.725;EPPR=365.845;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.88;PAO=0;PQA=0;PQR=0;PRO=0;QA=381;QR=6959;RO=175;RPL=10;RPP=24.725;RPPR=383.018;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=173;SRP=365.845;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:16,5:16:613:5:178:-10.0429,0,-49.1769 0/0:38:38,0:38:1519:0:0:0,-11.4391,-136.955 0/0:24:24,0:24:970:0:0:0,-7.22472,-87.5981 0/0:41:41,0:41:1639:0:0:0,-12.3422,-147.736 0/1:34:31,3:31:1221:3:122:-1.13747,0,-99.9239 0/0:27:25,2:25:997:2:81:0,-0.442076,-82.3391 dDocent_Contig_10327 66 . A C 105.218 . AB=0.191489;ABP=41.8658;AC=3;AF=0.25;AN=12;AO=9;CIGAR=1X;DP=130;DPB=130;DPRA=0.566265;EPP=22.5536;EPPR=265.758;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.111111;PAIREDR=0.942149;PAO=0;PQA=0;PQR=0;PRO=0;QA=312;QR=4692;RO=121;RPL=9;RPP=22.5536;RPPR=265.758;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=121;SRP=265.758;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:826:0:0:0,-6.62266,-74.6502 0/0:30:30,0:30:1159:0:0:0,-9.0309,-104.592 0/0:31:31,0:31:1230:0:0:0,-9.33193,-110.972 0/1:42:36,6:36:1414:6:193:-5.03306,0,-114.876 0/1:2:1,1:1:41:1:40:-3.39362,0,-3.49251 0/1:3:1,2:1:22:2:79:-6.59454,0,-1.29684 dDocent_Contig_10329 107 . N A 751.274 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=28;CIGAR=1X;DP=28;DPB=28;DPRA=0;EPP=63.8115;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=825;QR=0;RO=0;RPL=0;RPP=63.8115;RPPR=0;RPR=28;RUN=1;SAF=0;SAP=63.8115;SAR=28;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:12:0,12:0:0:12:366:-33.2375,-3.61236,0 ./.:.:.:.:.:.:.:. 1/1:16:0,16:0:0:16:459:-41.5889,-4.81648,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10330 10 . T A 74.7609 . AB=0.107143;ABP=153.152;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=248;DPB=248;DPRA=1.32353;EPP=35.5824;EPPR=508.963;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.987124;PAO=0;PQA=0;PQR=0;PRO=0;QA=594;QR=9380;RO=233;RPL=0;RPP=35.5824;RPPR=508.963;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=233;SRP=508.963;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:1019:0:0:0,-7.82678,-91.9991 0/1:41:35,6:35:1423:6:233:-8.99608,0,-115.974 0/1:71:65,6:65:2636:6:240:-0.602525,0,-215.977 0/0:31:30,1:30:1208:1:41:0,-5.23736,-104.897 0/0:42:42,0:42:1684:0:0:0,-12.6433,-151.785 0/0:37:35,2:35:1410:2:80:0,-3.54632,-119.561 dDocent_Contig_10332 31 . C T 68.8837 . AB=0.122807;ABP=73.4498;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=337;DPB=337;DPRA=1.16026;EPP=24.725;EPPR=710.91;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.7;PAIREDR=0.800613;PAO=0;PQA=0;PQR=0;PRO=0;QA=401;QR=12800;RO=326;RPL=0;RPP=24.725;RPPR=710.91;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=326;SRP=710.91;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:57:55,1:55:2127:1:40:0,-13.2417,-187.644 0/1:57:50,7:50:1948:7:280:-8.41125,0,-158.372 0/0:67:65,2:65:2557:2:81:0,-12.4833,-222.588 0/0:57:57,0:57:2238:0:0:0,-17.1587,-201.598 0/0:45:45,0:45:1778:0:0:0,-13.5463,-160.241 0/0:54:54,0:54:2152:0:0:0,-16.2556,-193.862 dDocent_Contig_10333 35 . G C 62.2477 . AB=0.116279;ABP=112.998;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=346;DPB=346;DPRA=1.1227;EPP=33.4109;EPPR=723.939;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=526;QR=13081;RO=332;RPL=0;RPP=33.4109;RPPR=723.939;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=332;SRP=723.939;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:34,0:34:1339:0:0:0,-10.235,-120.766 0/0:50:48,2:48:1901:2:82:0,-7.27182,-163.508 0/0:47:45,2:45:1773:2:74:0,-7.12439,-152.767 0/1:86:76,10:76:2987:10:370:-7.74765,0,-243.033 0/0:80:80,0:80:3128:0:0:0,-24.0824,-281.598 0/0:49:49,0:49:1953:0:0:0,-14.7505,-175.969 dDocent_Contig_10334 82 . T C 1245.13 . AB=0.283019;ABP=89.7053;AC=5;AF=0.416667;AN=12;AO=60;CIGAR=1X;DP=216;DPB=216;DPRA=10.6;EPP=133.299;EPPR=341.76;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.961538;PAO=0;PQA=0;PQR=0;PRO=0;QA=2176;QR=5583;RO=156;RPL=60;RPP=133.299;RPPR=341.76;RPR=0;RUN=1;SAF=60;SAP=133.299;SAR=0;SRF=156;SRP=341.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:26,12:26:926:12:430:-27.601,0,-72.219 0/1:74:59,15:59:2059:15:537:-26.3892,0,-163.299 0/1:46:35,11:35:1289:11:407:-23.1309,0,-102.464 0/1:34:26,8:26:945:8:291:-16.3045,0,-75.1328 0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3134 0/1:20:6,14:6:220:14:511:-40.3093,0,-14.1349 dDocent_Contig_10335 17 . A T 134.393 . AB=0.208333;ABP=38.4777;AC=4;AF=0.333333;AN=12;AO=11;CIGAR=1X;DP=97;DPB=97;DPRA=0.877778;EPP=19.0002;EPPR=148.852;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.727273;PAIREDR=0.883721;PAO=0;PQA=0;PQR=0;PRO=0;QA=405;QR=3277;RO=86;RPL=0;RPP=26.8965;RPPR=189.757;RPR=11;RUN=1;SAF=10;SAP=19.0002;SAR=1;SRF=81;SRP=148.852;SRR=5;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:7:3,4:3:119:4:148:-11.5726,0,-8.9878 0/1:18:16,2:16:606:2:74:-1.60689,0,-49.4585 0/0:18:18,0:18:689:0:0:0,-5.41854,-62.34 0/0:31:30,1:30:1142:1:36:0,-5.73365,-99.4815 0/1:20:17,3:17:646:3:107:-3.96141,0,-52.4522 0/1:3:2,1:2:75:1:40:-3.09259,0,-6.21701 dDocent_Contig_10336 107 . N T 104.487 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=105;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10338 10 . G A 281.505 . AB=0.17;ABP=97.5996;AC=2;AF=0.166667;AN=12;AO=19;CIGAR=1X;DP=385;DPB=385;DPRA=0.67378;EPP=44.2683;EPPR=797.769;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997268;PAO=0;PQA=0;PQR=0;PRO=0;QA=756;QR=14757;RO=366;RPL=0;RPP=44.2683;RPPR=797.769;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=366;SRP=797.769;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:49:41,8:41:1641:8:316:-14.0527,0,-133.166 0/0:91:90,1:90:3619:1:40:0,-23.398,-321.727 0/0:30:29,1:29:1164:1:41:0,-4.93633,-100.94 0/1:51:42,9:42:1705:9:359:-17.3197,0,-138.312 0/0:32:32,0:32:1294:0:0:0,-9.63296,-116.722 0/0:132:132,0:132:5334:0:0:0,-39.736,-479.88 dDocent_Contig_10339 1 . N G 77.8076 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10340 89 . T G 2024.21 . AB=0.469945;ABP=4.44608;AC=6;AF=0.5;AN=12;AO=86;CIGAR=1X;DP=183;DPB=183;DPRA=0;EPP=189.757;EPPR=213.643;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.790698;PAIREDR=0.835052;PAO=0;PQA=0;PQR=0;PRO=0;QA=2964;QR=3312;RO=97;RPL=0;RPP=189.757;RPPR=213.643;RPR=86;RUN=1;SAF=0;SAP=189.757;SAR=86;SRF=0;SRP=213.643;SRR=97;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:7,21:7:244:21:721:-56.7808,0,-13.8712 0/1:23:13,10:13:447:10:347:-24.6416,0,-33.6359 0/1:26:11,15:11:380:15:515:-38.8502,0,-26.706 0/1:22:10,12:10:330:12:412:-30.7868,0,-23.3979 0/1:51:34,17:34:1174:17:589:-37.9843,0,-90.6139 0/1:33:22,11:22:737:11:380:-24.599,0,-56.7062 dDocent_Contig_10341 9 . C T 22421.2 . AB=0.0588235;ABP=2101.04;AC=7;AF=0.583333;AN=12;AO=73;CIGAR=1X9M;DP=1241;DPB=1241;DPRA=0;EPP=161.528;EPPR=352.617;GTI=0;LEN=1;MEANALT=8.5;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=0.356164;PAIREDR=0.484472;PAO=0;PQA=0;PQR=0;PRO=0;QA=2767;QR=6232;RO=161;RPL=0;RPP=161.528;RPPR=352.617;RPR=73;RUN=1;SAF=73;SAP=161.528;SAR=0;SRF=161;SRP=352.617;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:165:13,13,111,9,4,10:13:494:13,111,9,4,10:518,4128,344,145,379:-336.05,-297.319,-333.916,-2.13902,0,-9.23364,-311.736,-309.602,-14.4206,-349.537,-329.894,-327.759,-32.5814,-342.176,-369.199,-308.889,-306.754,-11.574,-321.171,-339.328,-346.389 0|1:302:32,27,179,2,35,18:32:1224:27,179,2,35,18:1045,6799,78,1370,696:-547.626,-471.433,-563.735,0,-14.6029,-46.5475,-550.848,-565.451,-94.0199,-650.675,-457.581,-472.184,-0.758911,-551.598,-547.474,-500.09,-514.693,-43.261,-594.108,-500.841,-595.101 0|1:177:27,8,109,1,16,8:27:1044:8,109,1,16,8:311,4140,34,623,304:-331.301,-313.871,-397.213,0,-60.1975,-52.9435,-336.671,-396.864,-82.9983,-422.12,-294.191,-354.384,-40.5239,-377.183,-375.125,-314.497,-374.691,-60.8245,-397.49,-355.011,-397.84 0|1:221:25,17,139,10,9,9:25:984:17,139,10,9,9:643,5260,387,360,337:-423.656,-378.479,-454.311,0,-28.2509,-39.1095,-399.391,-427.638,-49.1616,-477.33,-404.465,-432.712,-54.2376,-453.624,-482.706,-403.585,-431.832,-53.3562,-452.743,-457.818,-481.825 0|1:174:34,16,70,22,14,14:34:1315:16,70,22,14,14:600,2681,827,542,509:-209.797,-170.894,-274.086,0,-58.8741,-86.9403,-152.279,-211.15,-40.2592,-253.665,-180.246,-239.117,-68.2277,-220.502,-284.04,-178.474,-237.344,-66.4546,-218.73,-246.696,-282.268 0|1:202:30,8,133,6,6,14:30:1171:8,133,6,6,14:311,5048,223,231,542:-404.898,-388.371,-482.227,0,-70.7092,-56.2299,-395.68,-466.386,-78.0194,-490.138,-397.483,-468.189,-79.8242,-475.498,-491.94,-369.404,-440.11,-51.7418,-447.419,-449.222,-461.453 dDocent_Contig_10343 23 . A G 276.023 . AB=0.165049;ABP=103.383;AC=2;AF=0.166667;AN=12;AO=21;CIGAR=1X;DP=277;DPB=277;DPRA=1.06716;EPP=48.6112;EPPR=556.736;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.904762;PAIREDR=0.541176;PAO=0;PQA=0;PQR=0;PRO=0;QA=806;QR=10064;RO=255;RPL=0;RPP=48.6112;RPPR=556.736;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=255;SRP=556.736;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:34,0:34:1361:0:0:0,-10.235,-122.746 0/0:56:56,0:56:2231:0:0:0,-16.8577,-200.964 0/0:40:36,4:36:1396:4:126:0,-0.397261,-114.248 0/0:44:44,0:44:1740:0:0:0,-13.2453,-156.825 0/1:41:33,8:33:1280:8:325:-17.2768,0,-103.126 0/1:62:52,9:52:2056:9:355:-13.547,0,-166.477 dDocent_Contig_10344 8 . T A 64.674 . AB=0.147059;ABP=39.7976;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=123;DPB=123;DPRA=1.91011;EPP=13.8677;EPPR=259.244;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=195;QR=4499;RO=118;RPL=0;RPP=13.8677;RPPR=259.244;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=118;SRP=259.244;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:29,5:29:1105:5:195:-7.68918,0,-89.5168 0/0:22:22,0:22:831:0:0:0,-6.62266,-75.1112 0/0:26:26,0:26:996:0:0:0,-7.82678,-89.9506 0/0:5:5,0:5:193:0:0:0,-1.50515,-17.7414 0/0:4:4,0:4:154:0:0:0,-1.20412,-14.2335 0/0:32:32,0:32:1220:0:0:0,-9.63296,-110.096 dDocent_Contig_10345 23 . C A 2837.73 . AB=0.278689;ABP=184.666;AC=6;AF=0.5;AN=12;AO=119;CIGAR=1X;DP=427;DPB=427;DPRA=0;EPP=261.416;EPPR=669.652;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.560261;PAO=0;PQA=0;PQR=0;PRO=0;QA=4686;QR=12245;RO=307;RPL=0;RPP=261.416;RPPR=669.652;RPR=119;RUN=1;SAF=119;SAP=261.416;SAR=0;SRF=307;SRP=669.652;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:80:59,20:59:2370:20:779:-46.2316,0,-189.254 0/1:80:51,29:51:2014:29:1132:-78.0757,0,-157.363 0/1:98:68,30:68:2709:30:1180:-76.9742,0,-214.434 0/1:101:75,26:75:3015:26:1033:-62.8594,0,-241.021 0/1:25:17,8:17:683:8:322:-21.823,0,-54.2728 0/1:43:37,6:37:1454:6:240:-9.03078,0,-118.163 dDocent_Contig_10346 30 . T A 414.562 . AB=0.583333;ABP=4.45795;AC=1;AF=0.125;AN=8;AO=14;CIGAR=1X;DP=103;DPB=103;DPRA=0.911392;EPP=33.4109;EPPR=194.1;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=556;QR=3510;RO=88;RPL=0;RPP=33.4109;RPPR=194.1;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=88;SRP=194.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:32,0:32:1279:0:0:0,-9.63296,-115.376 0/1:24:10,14:10:392:14:556:-43.1552,0,-28.4064 0/0:23:22,0:22:874:0:0:0,-6.62266,-78.6625 0/0:24:24,0:24:965:0:0:0,-7.22472,-87.1497 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10347 84 . T C 716.557 . AB=0.604167;ABP=7.5342;AC=2;AF=0.2;AN=10;AO=30;CIGAR=1X1M1I5M;DP=99;DPB=103.286;DPRA=1.39583;EPP=68.1545;EPPR=152.842;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.956522;PAO=0;PQA=0;PQR=0;PRO=0;QA=1019;QR=2374;RO=69;RPL=30;RPP=68.1545;RPPR=152.842;RPR=0;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=69;SRP=152.842;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:21:21,0:21:711:0:0:0,-6.32163,-64.3072 0|1:12:10,2:10:348:2:70:-3.03504,0,-28.0435 0|0:11:11,0:11:388:0:0:0,-3.31133,-35.258 0|0:19:18,1:18:630:1:33:0,-2.42043,-53.7282 0|1:36:9,27:9:297:27:916:-71.9137,0,-16.2144 .:.:.:.:.:.:.:. dDocent_Contig_10348 18 . T G 8336.39 . AB=0.729282;ABP=168.306;AC=6;AF=0.5;AN=12;AO=264;CIGAR=1X;DP=362;DPB=362;DPRA=0;EPP=576.279;EPPR=215.815;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.867424;PAIREDR=0.867347;PAO=0;PQA=0;PQR=0;PRO=0;QA=10584;QR=3935;RO=98;RPL=0;RPP=576.279;RPPR=215.815;RPR=264;RUN=1;SAF=264;SAP=576.279;SAR=0;SRF=98;SRP=215.815;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:39:13,26:13:523:26:1039:-82.0621,0,-35.6765 0/1:83:21,62:21:832:62:2498:-199.967,0,-50.2083 0/1:58:17,41:17:688:41:1641:-130.457,0,-44.7894 0/1:54:17,37:17:676:37:1451:-114.577,0,-44.9116 0/1:51:12,39:12:487:39:1583:-127.347,0,-28.8289 0/1:77:18,59:18:729:59:2372:-190.451,0,-42.7531 dDocent_Contig_10349 41 . C T 82.8738 . AB=0.266667;ABP=10.1038;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=120;DPB=120;DPRA=0.714286;EPP=11.6962;EPPR=254.901;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=155;QR=4581;RO=116;RPL=0;RPP=11.6962;RPPR=254.901;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=116;SRP=254.901;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:1:1,0:1:40:0:0:0,-0.30103,-3.99568 0/1:15:11,4:11:439:4:155:-9.80952,0,-35.3485 0/0:12:12,0:12:468:0:0:0,-3.61236,-42.4684 0/0:1:1,0:1:41:0:0:0,-0.30103,-4.09457 0/0:59:59,0:59:2321:0:0:0,-17.7608,-209.057 0/0:32:32,0:32:1272:0:0:0,-9.63296,-114.752 dDocent_Contig_10350 55 . G A 370.054 . AB=0.173228;ABP=120.8;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X;DP=253;DPB=253;DPRA=2.01587;EPP=50.7827;EPPR=504.62;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.681818;PAIREDR=0.779221;PAO=0;PQA=0;PQR=0;PRO=0;QA=864;QR=9210;RO=231;RPL=22;RPP=50.7827;RPPR=504.62;RPR=0;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=231;SRP=504.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:42:42,0:42:1690:0:0:0,-12.6433,-152.323 0/0:45:45,0:45:1808:0:0:0,-13.5463,-162.927 0/0:20:20,0:20:791:0:0:0,-6.0206,-71.5056 0/0:19:19,0:19:764:0:0:0,-5.71957,-69.0796 0/1:69:57,12:57:2254:12:462:-21.1471,0,-182.247 0/1:58:48,10:48:1903:10:402:-19.0801,0,-154.001 dDocent_Contig_10352 17 . T G 1228.56 . AB=0.0972973;ABP=263.599;AC=4;AF=0.333333;AN=12;AO=24;CIGAR=6M1X6M;DP=381;DPB=375.846;DPRA=0;EPP=55.1256;EPPR=630.566;GTI=0;LEN=1;MEANALT=2.4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.453287;PAO=0;PQA=0;PQR=0;PRO=0;QA=962;QR=11276;RO=289;RPL=0;RPP=55.1256;RPPR=630.566;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=289;SRP=630.566;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:30:19,10,0:19:740:10,0:329,0:-20.8128,0,-57.8184,-26.5323,-60.8287,-87.3874 0|1:70:52,15,3:52:2029:15,3:514,120:-25.2028,0,-162.262,-30.9612,-156.892,-196.886 0|1:64:30,19,13:30:1169:19,13:732,528:-51.0755,0,-90.3661,-16.546,-52.5309,-108.725 0|1:51:35,14,2:35:1375:14,2:531,80:-32.9867,0,-108.875,-36.93,-106.499,-149.433 0|0:71:66,3,2:66:2583:3,2:109,78:0,-10.9835,-222.467,-13.4458,-216.958,-225.255 0|0:95:87,4,4:87:3380:4,4:145,156:0,-14.6528,-291.174,-13.3499,-279.556,-289.905 dDocent_Contig_10353 44 . T G 11575.7 . AB=0.503268;ABP=3.03869;AC=8;AF=0.666667;AN=12;AO=354;CIGAR=1X;DP=506;DPB=506;DPRA=0;EPP=771.712;EPPR=333.074;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13955;QR=6056;RO=152;RPL=0;RPP=771.712;RPPR=333.074;RPR=354;RUN=1;SAF=354;SAP=771.712;SAR=0;SRF=152;SRP=333.074;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:56:30,26:30:1181:26:1036:-76.6696,0,-89.708 0/1:79:38,41:38:1532:41:1655:-125.393,0,-114.336 0/1:67:20,47:20:781:47:1843:-145.903,0,-50.4363 0/1:104:64,40:64:2562:40:1566:-109.869,0,-199.407 1/1:67:0,67:0:0:67:2672:-240.604,-20.169,0 1/1:133:0,133:0:0:133:5183:-466.353,-40.037,0 dDocent_Contig_10355 144 . G A 153.522 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=4;CIGAR=1X;DP=90;DPB=90;DPRA=0.232558;EPP=11.6962;EPPR=189.757;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.872093;PAO=0;PQA=0;PQR=0;PRO=0;QA=161;QR=3421;RO=86;RPL=0;RPP=11.6962;RPPR=189.757;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=189.757;SRR=86;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:773:0:0:0,-6.0206,-69.8715 0/0:16:16,0:16:632:0:0:0,-4.81648,-57.2067 0/0:32:32,0:32:1294:0:0:0,-9.63296,-116.723 0/0:16:16,0:16:640:0:0:0,-4.81648,-57.9323 0/0:2:2,0:2:82:0:0:0,-0.60206,-7.77968 1/1:4:0,4:0:0:4:161:-14.8749,-1.20412,0 dDocent_Contig_10357 165 . G T 2633.66 . AB=0.409283;ABP=19.9514;AC=4;AF=0.333333;AN=12;AO=97;CIGAR=1X;DP=436;DPB=436;DPRA=0.595477;EPP=213.643;EPPR=687.947;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3786;QR=13480;RO=339;RPL=97;RPP=213.643;RPPR=687.947;RPR=0;RUN=1;SAF=0;SAP=213.643;SAR=97;SRF=0;SRP=739.139;SRR=339;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:58:27,31:27:1075:31:1208:-91.5261,0,-79.5817 0/1:106:66,40:66:2641:40:1562:-108.912,0,-205.902 0/1:22:14,8:14:561:8:311:-21.7284,0,-44.2102 0/1:51:33,18:33:1305:18:705:-48.4215,0,-102.361 0/0:44:44,0:44:1687:0:0:0,-13.2453,-152.05 0/0:155:155,0:155:6211:0:0:0,-46.6596,-558.746 dDocent_Contig_10358 10 . C A 1003.75 . AB=0.41573;ABP=8.49998;AC=4;AF=0.333333;AN=12;AO=38;CIGAR=1X;DP=139;DPB=139;DPRA=1.12381;EPP=85.5263;EPPR=222.329;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.960396;PAO=0;PQA=0;PQR=0;PRO=0;QA=1516;QR=4040;RO=101;RPL=0;RPP=85.5263;RPPR=222.329;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=101;SRP=222.329;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:18,7:18:723:7:282:-18.2266,0,-57.8682 0/0:21:21,0:21:835:0:0:0,-6.32163,-75.4656 0/1:14:12,2:12:484:2:82:-3.56526,0,-39.6972 0/0:29:28,1:28:1117:1:39:0,-4.83331,-96.9196 0/1:30:14,16:14:555:16:635:-48.4548,0,-41.2607 0/1:20:8,12:8:326:12:478:-37.3481,0,-23.6893 dDocent_Contig_10359 14 . C T 7013.88 . AB=0.157333;ABP=385.473;AC=2;AF=0.166667;AN=12;AO=59;CIGAR=2X2M;DP=503;DPB=503;DPRA=0;EPP=131.127;EPPR=365.646;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2268;QR=6557;RO=167;RPL=0;RPP=131.127;RPPR=365.646;RPR=59;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=167;SRP=365.646;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:51:7,5,14,2,21:7:282:5,14,2,21:191,526,81,827:-85.761,-72.199,-93.9398,-44.7834,-52.3611,-63.8147,-81.1881,-88.765,-61.3493,-103.832,-19.8332,-27.413,0,-36.4016,-36.7606 0|0:92:30,1,24,0,37:30:1152:1,24,0,37:41,927,0,1457:-110.821,-116.468,-210.716,-43.724,-134.887,-131.046,-119.852,-211.017,-138.271,-214.401,0,-91.1651,-18.4177,-94.5497,-83.4116 0|0:22:3,8,3,2,6:3:117:8,3,2,6:309,118,81,234:-34.0843,-9.61483,-16.823,-25.2802,-9.52443,-33.9943,-28.3065,-12.5501,-28.2164,-37.3218,-15.7543,0,-15.664,-18.6901,-23.5651 1|0:65:2,11,17,0,35:2:73:11,17,0,35:438,658,0,1398:-162.626,-127.16,-129.812,-109.182,-79.0775,-110.027,-163.228,-133.123,-115.145,-169.191,-48.0831,-17.9734,0,-54.0456,-43.5095 0|0:128:42,15,0,4,67:42:1647:15,0,4,67:579,0,161,2595:-200.495,-165.593,-296.519,-213.138,-301.035,-348.58,-199.868,-287.765,-335.31,-334.106,0,-87.8982,-135.442,-122.172,-115.273 0|0:145:83,16,1,0,44:83:3286:16,1,0,44:632,39,0,1747:-118.822,-91.8022,-357.426,-140.602,-359.037,-410.742,-143.808,-362.243,-411.043,-414.249,0,-218.436,-267.236,-270.442,-257.196 dDocent_Contig_10360 16 . T G 1964.13 . AB=0.286738;ABP=113.226;AC=5;AF=0.416667;AN=12;AO=85;CIGAR=1X2M;DP=345;DPB=345;DPRA=0;EPP=187.585;EPPR=554.564;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.470588;PAIREDR=0.653543;PAO=0;PQA=0;PQR=0;PRO=0;QA=3386;QR=10017;RO=254;RPL=0;RPP=187.585;RPPR=554.564;RPR=85;RUN=1;SAF=85;SAP=187.585;SAR=0;SRF=254;SRP=554.564;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:57:45,0,12:45:1790:0,12:0,482:-26.572,-40.1183,-187.494,0,-147.776,-144.164 0|1:92:55,0,36:55:2164:0,36:0,1419:-100.455,-117.012,-295.019,0,-178.281,-167.444 0|1:40:25,5,10:25:992:5,10:194,404:-25.79,-17.3818,-97.5284,0,-65.7264,-78.6538 0|1:50:41,0,9:41:1618:0,9:0,364:-18.0733,-30.4155,-163.533,0,-133.519,-130.81 0|1:40:27,0,13:27:1065:0,13:0,516:-34.7441,-42.8719,-130.487,0,-88.0106,-84.0972 0|0:66:61,0,5:61:2388:0,5:0,201:0,-18.3628,-214.687,-1.3973,-198.122,-196.617 dDocent_Contig_10361 25 . G T 56.449 . AB=0.117647;ABP=67.7713;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=135;DPB=135;DPRA=3.03571;EPP=16.0391;EPPR=283.13;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=246;QR=5079;RO=129;RPL=0;RPP=16.0391;RPPR=283.13;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=129;SRP=283.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:34,0:34:1353:0:0:0,-10.235,-122.025 0/0:8:8,0:8:318:0:0:0,-2.40824,-28.9866 0/0:33:33,0:33:1289:0:0:0,-9.93399,-116.267 0/1:51:45,6:45:1792:6:246:-7.16759,0,-146.14 0/0:7:7,0:7:272:0:0:0,-2.10721,-24.8455 0/0:2:2,0:2:55:0:0:0,-0.60206,-5.22172 dDocent_Contig_10362 50 . G C 40.7465 . AB=0.333333;ABP=4.45795;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=227;DPB=227;DPRA=1.00885;EPP=18.2106;EPPR=480.734;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.986364;PAO=0;PQA=0;PQR=0;PRO=0;QA=267;QR=8544;RO=220;RPL=7;RPP=18.2106;RPPR=480.734;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=220;SRP=480.734;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:60:60,0:60:2300:0:0:0,-18.0618,-207.181 0/0:56:53,3:53:2071:3:121:0,-5.57769,-175.295 0/0:52:52,0:52:2046:0:0:0,-15.6536,-184.336 0/0:52:50,2:50:1937:2:68:0,-9.19893,-168.089 0/0:1:1,0:1:40:0:0:0,-0.30103,-3.99568 0/1:6:4,2:4:150:2:78:-5.59712,0,-12.0574 dDocent_Contig_10363 45 . A G 1841.88 . AB=0.395349;ABP=19.3721;AC=6;AF=0.5;AN=12;AO=68;CIGAR=1X;DP=172;DPB=172;DPRA=0;EPP=150.67;EPPR=228.843;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2723;QR=4116;RO=104;RPL=0;RPP=150.67;RPPR=228.843;RPR=68;RUN=1;SAF=68;SAP=150.67;SAR=0;SRF=104;SRP=228.843;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:9:5,4:5:193:4:156:-11.7075,0,-15.0281 0/1:21:13,8:13:515:8:324:-23.2076,0,-40.3732 0/1:26:21,5:21:854:5:202:-10.7347,0,-69.3437 0/1:45:27,18:27:1053:18:712:-50.8594,0,-81.5152 0/1:31:23,8:23:904:8:321:-19.9262,0,-72.333 0/1:40:15,25:15:597:25:1008:-78.9744,0,-42.0277 dDocent_Contig_10365 47 . A G 149.191 . AB=0.214286;ABP=32.7905;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=204;DPB=204;DPRA=0.518519;EPP=14.8328;EPPR=160.704;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.697436;PAO=0;PQA=0;PQR=0;PRO=0;QA=334;QR=7688;RO=195;RPL=9;RPP=22.5536;RPPR=91.2166;RPR=0;RUN=1;SAF=8;SAP=14.8328;SAR=1;SRF=180;SRP=306.181;SRR=15;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:40,0:40:1590:0:0:0,-12.0412,-143.338 0/0:60:60,0:60:2355:0:0:0,-18.0618,-212.12 0/0:24:24,0:24:953:0:0:0,-7.22472,-86.0711 0/0:38:38,0:38:1482:0:0:0,-11.4391,-133.631 0/1:14:11,3:11:436:3:119:-6.88059,0,-35.3787 0/1:28:22,6:22:872:6:215:-11.2604,0,-70.3611 dDocent_Contig_10368 18 . A T 36.2039 . AB=0.142857;ABP=26.2761;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=120;DPB=120;DPRA=1.44898;EPP=13.8677;EPPR=252.73;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=204;QR=4566;RO=115;RPL=0;RPP=13.8677;RPPR=252.73;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=115;SRP=252.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:808:0:0:0,-6.0206,-73.0365 0/0:25:24,1:24:929:1:40:0,-3.53007,-79.9054 0/0:25:24,1:24:939:1:41:0,-3.43118,-80.7185 0/1:21:18,3:18:717:3:123:-5.14316,0,-58.5339 0/0:9:9,0:9:360:0:0:0,-2.70927,-32.7638 0/0:20:20,0:20:813:0:0:0,-6.0206,-73.4846 dDocent_Contig_10369 41 . T G 95.8418 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=4;CIGAR=7M1X5M;DP=274;DPB=275.077;DPRA=1.16959;EPP=11.6962;EPPR=539.364;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=1.38778e-17;PAIRED=0.75;PAIREDR=0.643725;PAO=0;PQA=0;PQR=0;PRO=0;QA=162;QR=9767;RO=247;RPL=0;RPP=11.6962;RPPR=539.364;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=247;SRP=539.364;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:53:40,0,5,7,0:40:1589:0,5,7,0:0,173,277,0:-10.8054,-22.8466,-153.699,-8.79962,-139.652,-138.146,0,-130.9,-116.854,-128.793,-22.8466,-153.699,-139.652,-130.9,-153.699 0|0:43:39,0,0,2,0:39:1544:0,0,2,0:0,0,77,0:0,-11.7402,-138.906,-11.7402,-138.906,-138.906,-5.33039,-132.584,-132.584,-131.982,-11.7402,-138.906,-138.906,-132.584,-138.906 0|0:48:48,0,0,0,0:48:1889:0,0,0,0:0,0,0,0:0,-14.4494,-170.231,-14.4494,-170.231,-170.231,-14.4494,-170.231,-170.231,-170.231,-14.4494,-170.231,-170.231,-170.231,-170.231 0|0:38:35,0,3,0,0:35:1392:0,3,0,0:0,105,0,0:0,-10.536,-125.194,-1.64592,-116.657,-115.754,-10.536,-125.194,-116.657,-125.194,-10.536,-125.194,-116.657,-125.194,-125.194 0|0:42:39,3,0,0,0:39:1547:3,0,0,0:121,0,0,0:0,-1.36306,-128.204,-11.7402,-129.107,-139.082,-11.7402,-129.107,-139.082,-139.082,-11.7402,-129.107,-139.082,-139.082,-139.082 0|0:50:46,0,0,0,4:46:1806:0,0,0,4:0,0,0,162:0,-13.8474,-162.367,-13.8474,-162.367,-162.367,-13.8474,-162.367,-162.367,-162.367,-0.0845438,-149.007,-149.007,-149.007,-147.803 dDocent_Contig_10370 98 . N T 66.4848 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=70;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10371 7 . T C 217.9 . AB=0.2;ABP=26.4622;AC=3;AF=0.25;AN=12;AO=6;CIGAR=1X9M;DP=155;DPB=155;DPRA=0.810811;EPP=16.0391;EPPR=300.502;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.715328;PAO=0;PQA=0;PQR=0;PRO=0;QA=232;QR=5317;RO=137;RPL=0;RPP=16.0391;RPPR=300.502;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=137;SRP=300.502;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:30:22,0,1,6:22:858:0,1,6:0,39,232:-12.4724,-19.0951,-89.6326,-15.8869,-86.4265,-86.1255,0,-70.5759,-67.3698,-68.7697 0|0:39:39,0,0,0:39:1515:0,0,0:0,0,0:0,-11.7402,-136.616,-11.7402,-136.616,-136.616,-11.7402,-136.616,-136.616,-136.616 0|0:13:11,0,2,0:11:426:0,2,0:0,77,0:-3.39575,-6.70708,-41.7004,0,-35.3783,-34.7762,-6.70708,-41.7004,-35.3783,-41.7004 0|0:35:35,0,0,0:35:1361:0,0,0:0,0,0:0,-10.536,-122.766,-10.536,-122.766,-122.766,-10.536,-122.766,-122.766,-122.766 0|1:16:11,4,0,0:11:426:4,0,0:152,0,0:-9.13056,0,-33.7705,-12.4419,-34.9746,-47.438,-12.4419,-34.9746,-47.438,-47.438 0|1:22:19,3,0,0:19:731:3,0,0:114,0,0:-4.00956,0,-59.4895,-9.72913,-60.3926,-69.7414,-9.72913,-60.3926,-69.7414,-69.7414 dDocent_Contig_10372 107 . N G 938.398 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=31;CIGAR=1X;DP=31;DPB=31;DPRA=0;EPP=70.3259;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0.0322581;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1017;QR=0;RO=0;RPL=0;RPP=70.3259;RPPR=0;RPR=31;RUN=1;SAF=0;SAP=70.3259;SAR=31;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:139:-12.8527,-1.20412,0 1/1:6:0,6:0:0:6:199:-18.2362,-1.80618,0 1/1:6:0,6:0:0:6:182:-16.677,-1.80618,0 1/1:8:0,8:0:0:8:278:-25.358,-2.40824,0 1/1:7:0,7:0:0:7:219:-20.0168,-2.10721,0 dDocent_Contig_10373 144 . C G 39.2933 . AB=0.16129;ABP=33.9012;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=126;DPB=126;DPRA=0.594937;EPP=16.0391;EPPR=263.587;GTI=0;LEN=1;MEANALT=1;MQM=53.6667;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=208;QR=4284;RO=120;RPL=0;RPP=16.0391;RPPR=263.587;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=263.587;SRR=120;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:3:3,0:3:111:0:0:0,-0.90309,-10.3539 0/0:16:15,1:15:525:1:36:0,-1.22331,-43.9794 0/0:62:62,0:62:2216:0:0:0,-18.6639,-199.691 0/1:4:2,2:2:71:2:70:-5.43529,0,-5.53778 0/0:14:14,0:14:501:0:0:0,-4.21442,-45.424 0/1:27:24,3:24:860:3:102:-1.37193,0,-69.5917 dDocent_Contig_10374 10 . A G 241.432 . AB=0.210526;ABP=44.4969;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=288;DPB=288;DPRA=0.782609;EPP=31.2394;EPPR=600.165;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.923077;PAIREDR=0.92;PAO=0;PQA=0;PQR=0;PRO=0;QA=512;QR=11035;RO=275;RPL=0;RPP=31.2394;RPPR=600.165;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=275;SRP=600.165;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:58:58,0:58:2342:0:0:0,-17.4597,-210.928 0/0:50:50,0:50:1995:0:0:0,-15.0515,-179.742 0/0:36:36,0:36:1430:0:0:0,-10.8371,-128.953 0/0:63:63,0:63:2539:0:0:0,-18.9649,-228.641 0/0:24:23,1:23:924:1:40:0,-3.22904,-79.4693 0/1:57:45,12:45:1805:12:472:-25.666,0,-145.503 dDocent_Contig_10375 29 . C G 918.531 . AB=0.357143;ABP=10.4553;AC=4;AF=0.333333;AN=12;AO=30;CIGAR=1X;DP=82;DPB=82;DPRA=2.28;EPP=68.1545;EPPR=115.927;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.942308;PAO=0;PQA=0;PQR=0;PRO=0;QA=1185;QR=2092;RO=52;RPL=0;RPP=68.1545;RPPR=115.927;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=52;SRP=115.927;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:14,12:14:560:12:456:-33.5482,0,-42.9135 1/1:15:0,15:0:0:15:606:-54.8784,-4.51545,0 0/1:16:13,3:13:516:3:123:-6.64831,0,-41.9696 0/0:7:7,0:7:282:0:0:0,-2.10721,-25.753 0/0:5:5,0:5:201:0:0:0,-1.50515,-18.4707 0/0:13:13,0:13:533:0:0:0,-3.91339,-48.3159 dDocent_Contig_10376 17 . C T 1433.33 . AB=0.316667;ABP=55.5599;AC=5;AF=0.416667;AN=12;AO=57;CIGAR=1X;DP=198;DPB=198;DPRA=2;EPP=126.784;EPPR=309.188;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.77193;PAIREDR=0.48227;PAO=0;PQA=0;PQR=0;PRO=0;QA=2278;QR=5604;RO=141;RPL=0;RPP=126.784;RPPR=309.188;RPR=57;RUN=1;SAF=57;SAP=126.784;SAR=0;SRF=141;SRP=309.188;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:9,14:9:362:14:571:-44.8076,0,-26.0179 0/1:31:25,6:25:1015:6:235:-12.1881,0,-82.3108 0/0:18:18,0:18:709:0:0:0,-5.41854,-64.133 0/1:37:30,7:30:1207:7:253:-11.9664,0,-97.7663 0/1:42:33,9:33:1302:9:366:-20.6613,0,-104.801 0/1:47:26,21:26:1009:21:853:-62.9315,0,-76.9396 dDocent_Contig_10377 10 . A G 103.531 . AB=0.148936;ABP=53.3238;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=480;DPB=480;DPRA=0.581081;EPP=24.725;EPPR=1023.6;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.961702;PAO=0;PQA=0;PQR=0;PRO=0;QA=407;QR=18600;RO=470;RPL=0;RPP=24.725;RPPR=1023.6;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=470;SRP=1023.6;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:98:98,0:98:3899:0:0:0,-29.5009,-350.905 0/0:102:101,1:101:4016:1:41:0,-26.6105,-357.332 0/0:57:56,1:56:2158:1:40:0,-13.163,-190.411 0/0:124:124,0:124:4917:0:0:0,-37.3277,-442.438 0/1:47:40,7:40:1575:7:285:-11.876,0,-127.831 0/0:52:51,1:51:2035:1:41:0,-11.559,-179.244 dDocent_Contig_10378 12 . A T 562.732 . AB=0.156364;ABP=285.073;AC=3;AF=0.25;AN=12;AO=59;CIGAR=1X;DP=670;DPB=670;DPRA=0;EPP=131.127;EPPR=1327.61;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=57.5672;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0;PAIREDR=0.457377;PAO=0;PQA=0;PQR=0;PRO=0;QA=2200;QR=23910;RO=610;RPL=0;RPP=131.127;RPPR=1327.61;RPR=59;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=610;SRP=1327.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:119:110,8:110:4358:8:300:0,-8.4648,-362.308 0/0:125:121,4:121:4768:4:153:0,-23.4875,-410.096 0/1:114:95,19:95:3739:19:718:-30.6319,0,-300.748 0/0:151:147,4:147:5684:4:155:0,-31.1303,-488.225 0/1:91:76,15:76:2989:15:554:-22.8033,0,-238.982 0/1:70:61,9:61:2372:9:320:-8.0598,0,-189.803 dDocent_Contig_10379 23 . G A 400.735 . AB=0.155689;ABP=174.973;AC=2;AF=0.166667;AN=12;AO=28;CIGAR=1X;DP=408;DPB=408;DPRA=1.63226;EPP=63.8115;EPPR=828.17;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.892857;PAIREDR=0.771053;PAO=0;PQA=0;PQR=0;PRO=0;QA=1113;QR=15081;RO=380;RPL=0;RPP=63.8115;RPPR=828.17;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=380;SRP=828.17;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:57:57,0:57:2250:0:0:0,-17.1587,-202.662 0/0:86:84,2:84:3361:2:81:0,-18.2028,-294.856 0/1:58:47,11:47:1866:11:439:-22.4053,0,-150.692 0/1:109:94,15:94:3737:15:593:-20.8901,0,-303.517 0/0:54:54,0:54:2140:0:0:0,-16.2556,-192.782 0/0:44:44,0:44:1727:0:0:0,-13.2453,-155.652 dDocent_Contig_10380 14 . T A 326.427 . AB=0.128631;ABP=291.708;AC=3;AF=0.25;AN=12;AO=33;CIGAR=1X;DP=295;DPB=295;DPRA=14.25;EPP=74.6689;EPPR=571.936;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1294;QR=10356;RO=262;RPL=0;RPP=74.6689;RPPR=571.936;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=262;SRP=571.936;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:70:62,8:62:2444:8:316:-7.73294,0,-199.034 0/1:97:82,15:82:3223:15:582:-23.5109,0,-260.94 0/0:44:42,2:42:1669:2:79:0,-5.74808,-142.938 0/1:74:66,8:66:2642:8:317:-6.62054,0,-215.626 0/0:3:3,0:3:120:0:0:0,-0.90309,-11.1873 0/0:7:7,0:7:258:0:0:0,-2.10721,-23.5667 dDocent_Contig_10381 136 . C T 233.21 . AB=0.407407;ABP=5.02092;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=2X;DP=66;DPB=66;DPRA=1.38462;EPP=26.8965;EPPR=122.441;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=371;QR=1841;RO=55;RPL=0;RPP=26.8965;RPPR=122.441;RPR=11;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=122.441;SRR=55;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:7:7,0:7:224:0:0:0,-2.10721,-20.4743 0|0:17:17,0:17:553:0:0:0,-5.11751,-50.0796 0|0:6:6,0:6:206:0:0:0,-1.80618,-18.8767 0|0:9:9,0:9:306:0:0:0,-2.70927,-27.8706 0|1:16:14,2:14:482:2:62:-1.07201,0,-38.8921 0|1:11:2,9:2:70:9:309:-24.8322,0,-3.33607 dDocent_Contig_10382 1 . N G 157.141 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=164;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:98:-9.14405,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:66:-6.26818,-0.60206,0 dDocent_Contig_10383 11 . C T 12167.8 . AB=0.0336538;ABP=395.922;AC=0;AF=0;AN=12;AO=11;CIGAR=1X2M1X;DP=513;DPB=513;DPRA=0;EPP=26.8965;EPPR=274.444;GTI=0;LEN=1;MEANALT=2.25;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.181818;PAIREDR=0.864;PAO=0;PQA=0;PQR=0;PRO=0;QA=434;QR=4971;RO=125;RPL=0;RPP=26.8965;RPPR=274.444;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=125;SRP=274.444;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:80:29,1,50:29:1161:1,50:41,2026:-155.898,-161.244,-256.586,0,-92.2488,-80.5817 0|0:113:43,0,70:43:1699:0,70:0,2818:-219.698,-232.642,-372.442,0,-140.197,-119.125 0|0:76:16,3,57:16:644:3,57:123,2298:-184.587,-179.251,-231.423,0,-42.9155,-35.9102 0|0:98:29,0,69:29:1147:0,69:0,2780:-220.799,-229.529,-323.916,0,-94.7838,-74.0127 0|0:52:5,3,44:5:199:3,44:108,1788:-146.012,-138.711,-154.194,0,-7.61499,-3.16435 0|0:94:3,4,86:3:121:4,86:162,3447:-298.999,-286.543,-295.314,-15.9019,-12.5078,0 dDocent_Contig_10384 7 . T C 102.094 . AB=0.147541;ABP=68.8308;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=160;DPB=160;DPRA=1.75862;EPP=29.068;EPPR=324.388;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.916667;PAIREDR=0.925676;PAO=0;PQA=0;PQR=0;PRO=0;QA=460;QR=5680;RO=148;RPL=0;RPP=29.068;RPPR=324.388;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=148;SRP=324.388;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:882:0:0:0,-6.92369,-79.6998 0/0:41:38,3:38:1459:3:115:0,-1.61734,-120.864 0/1:21:18,3:18:684:3:117:-4.58875,0,-55.572 0/0:26:26,0:26:993:0:0:0,-7.82678,-89.6793 0/0:9:9,0:9:349:0:0:0,-2.70927,-31.7708 0/1:40:34,6:34:1313:6:228:-8.84226,0,-106.417 dDocent_Contig_10385 32 . C T 1998.6 . AB=0.414773;ABP=14.1144;AC=5;AF=0.416667;AN=12;AO=77;CIGAR=1X;DP=227;DPB=227;DPRA=0;EPP=170.214;EPPR=328.731;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.61039;PAIREDR=0.673333;PAO=0;PQA=0;PQR=0;PRO=0;QA=3056;QR=5991;RO=150;RPL=0;RPP=170.214;RPPR=328.731;RPR=77;RUN=1;SAF=77;SAP=170.214;SAR=0;SRF=150;SRP=328.731;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:21,20:21:835:20:785:-58.6238,0,-63.1207 0/1:38:25,13:25:1004:13:526:-36.2474,0,-79.2135 0/1:33:14,19:14:569:19:756:-58.4257,0,-41.6183 0/1:39:22,17:22:875:17:664:-48.3435,0,-67.3174 0/1:25:21,4:21:836:4:162:-7.44121,0,-68.0285 0/0:51:47,4:47:1872:4:163:0,-0.294102,-153.626 dDocent_Contig_10386 18 . G C 4284.77 . AB=0.565445;ABP=10.1159;AC=7;AF=0.583333;AN=12;AO=143;CIGAR=1X;DP=290;DPB=290;DPRA=0.70625;EPP=313.531;EPPR=322.217;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9252;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.993197;PAO=0;PQA=0;PQR=0;PRO=0;QA=5441;QR=5511;RO=147;RPL=0;RPP=313.531;RPPR=322.217;RPR=143;RUN=1;SAF=143;SAP=313.531;SAR=0;SRF=147;SRP=322.217;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:64:64,0:64:2387:0:0:0,-19.2659,-215.046 0/1:124:45,79:45:1687:79:3011:-233.825,0,-114.737 0/1:54:30,24:30:1133:24:924:-67.2187,0,-86.0148 0/1:13:8,5:8:304:5:190:-13.5538,0,-23.8062 1/1:18:0,18:0:0:18:688:-62.252,-5.41854,0 1/1:17:0,17:0:0:17:628:-56.8488,-5.11751,0 dDocent_Contig_10387 1 . N G 931.445 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=30;CIGAR=1X;DP=30;DPB=30;DPRA=0;EPP=68.1545;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1009;QR=0;RO=0;RPL=0;RPP=68.1545;RPPR=0;RPR=30;RUN=1;SAF=0;SAP=68.1545;SAR=30;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:7:0,7:0:0:7:244:-22.3001,-2.10721,0 1/1:7:0,7:0:0:7:244:-22.3001,-2.10721,0 ./.:.:.:.:.:.:.:. 1/1:8:0,8:0:0:8:279:-25.449,-2.40824,0 1/1:5:0,5:0:0:5:137:-12.6001,-1.50515,0 1/1:3:0,3:0:0:3:105:-9.79616,-0.90309,0 dDocent_Contig_10388 25 . A G 57.5959 . AB=0.166667;ABP=26.1727;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=5M1X6M;DP=178;DPB=177.583;DPRA=0.779221;EPP=11.6962;EPPR=367.818;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=157;QR=6616;RO=168;RPL=0;RPP=11.6962;RPPR=367.818;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=168;SRP=367.818;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:7:7,0:7:278:0:0:0,-2.10721,-25.3909 0|1:24:20,4:20:793:4:157:-7.28246,0,-64.4671 0|0:10:9,0:9:362:0:0:0,-2.70927,-32.5359 0|0:17:17,0:17:666:0:0:0,-5.11751,-60.2743 0|0:71:66,0:66:2599:0:0:0,-19.868,-233.677 0|0:49:49,0:49:1918:0:0:0,-14.7505,-172.84 dDocent_Contig_10390 42 . T G 921.206 . AB=0.308511;ABP=32.9489;AC=8;AF=0.666667;AN=12;AO=37;CIGAR=1X;DP=102;DPB=102;DPRA=0;EPP=83.3548;EPPR=144.156;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.756757;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1394;QR=2488;RO=65;RPL=0;RPP=83.3548;RPPR=144.156;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=65;SRP=144.156;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:18:9,9:9:349:9:346:-26.0803,0,-26.3471 0/1:21:11,10:11:408:10:352:-25.6861,0,-30.7386 0/1:23:19,4:19:739:4:154:-7.30866,0,-59.9072 0/1:32:26,6:26:992:6:229:-11.3422,0,-79.9408 1/1:4:0,4:0:0:4:156:-14.4167,-1.20412,0 1/1:4:0,4:0:0:4:157:-14.5083,-1.20412,0 dDocent_Contig_10391 31 . G A 131.245 . AB=0.0989399;ABP=398.395;AC=2;AF=0.166667;AN=12;AO=39;CIGAR=2X;DP=715;DPB=715;DPRA=1.19431;EPP=87.6977;EPPR=667.19;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.897436;PAIREDR=0.524812;PAO=0;PQA=0;PQR=0;PRO=0;QA=1543;QR=25880;RO=665;RPL=0;RPP=87.6977;RPPR=186.423;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=558;SRP=667.19;SRR=107;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:65:65,0:65:2551:0:0:0,-19.5669,-229.745 0|1:92:80,9:80:3156:9:361:-5.6578,0,-256.935 0|0:87:82,2:82:3188:2:81:0,-18.0073,-279.323 0|0:134:120,9:120:4688:9:347:0,-7.64004,-390.292 0|1:191:172,19:172:6577:19:754:-10.6885,0,-534.26 0|0:146:146,0:146:5720:0:0:0,-43.9504,-514.668 dDocent_Contig_10392 155 . G A 381.008 . AB=0.451613;ABP=3.64073;AC=3;AF=0.25;AN=12;AO=17;CIGAR=1X;DP=195;DPB=195;DPRA=0.355263;EPP=39.9253;EPPR=389.532;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=657;QR=7039;RO=178;RPL=0;RPP=39.9253;RPPR=389.532;RPR=17;RUN=1;SAF=0;SAP=39.9253;SAR=17;SRF=0;SRP=389.532;SRR=178;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:10:9,1:9:354:1:41:-1.08427,0,-29.2103 0/1:8:3,5:3:122:5:199:-15.8801,0,-8.96425 0/0:50:47,3:47:1867:3:95:0,-6.19291,-159.374 0/1:13:5,8:5:198:8:322:-25.4338,0,-14.2824 0/0:69:69,0:69:2759:0:0:0,-20.7711,-248.421 0/0:45:45,0:45:1739:0:0:0,-13.5463,-156.721 dDocent_Contig_10393 21 . G A 2653.58 . AB=0.257403;ABP=227.424;AC=6;AF=0.5;AN=12;AO=113;CIGAR=1X;DP=439;DPB=439;DPRA=0;EPP=248.387;EPPR=710.91;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.787611;PAIREDR=0.665644;PAO=0;PQA=0;PQR=0;PRO=0;QA=4520;QR=12787;RO=326;RPL=0;RPP=248.387;RPPR=710.91;RPR=113;RUN=1;SAF=113;SAP=248.387;SAR=0;SRF=326;SRP=710.91;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:39:30,9:30:1201:9:363:-21.2941,0,-96.6276 0/1:107:57,50:57:2243:50:1993:-147.348,0,-169.832 0/1:52:43,9:43:1670:9:362:-17.2901,0,-134.87 0/1:91:77,14:77:2976:14:567:-23.9788,0,-240.562 0/1:84:69,15:69:2700:15:608:-29.7714,0,-217.834 0/1:66:50,16:50:1997:16:627:-36.897,0,-160.059 dDocent_Contig_10395 32 . C G 34.906 . AB=0.285714;ABP=5.80219;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=2X;DP=58;DPB=58;DPRA=0.686275;EPP=7.35324;EPPR=124.613;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=75;QR=2150;RO=56;RPL=0;RPP=7.35324;RPPR=124.613;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=56;SRP=124.613;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:2:2,0:2:75:0:0:0,-0.60206,-7.12034 0|0:15:15,0:15:576:0:0:0,-4.51545,-52.1806 0|0:20:20,0:20:778:0:0:0,-6.0206,-70.3431 0|0:9:9,0:9:351:0:0:0,-2.70927,-31.951 0|1:7:5,2:5:181:2:75:-5.01313,0,-14.5334 0|0:5:5,0:5:189:0:0:0,-1.50515,-17.375 dDocent_Contig_10396 17 . C T 1619.32 . AB=0.382353;ABP=11.1853;AC=8;AF=0.666667;AN=12;AO=57;CIGAR=1X;DP=100;DPB=100;DPRA=0;EPP=126.784;EPPR=96.3836;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.982456;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2129;QR=1721;RO=43;RPL=0;RPP=126.784;RPPR=96.3836;RPR=57;RUN=1;SAF=57;SAP=126.784;SAR=0;SRF=43;SRP=96.3836;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:12,10:12:478:10:356:-25.7507,0,-36.7487 1/1:17:1,16:1:41:16:593:-49.6057,-1.02294,0 0/1:13:10,3:10:407:3:114:-6.71753,0,-33.0772 0/1:16:11,5:11:430:5:196:-13.1982,0,-34.234 1/1:15:0,15:0:0:15:562:-50.9196,-4.51545,0 0/1:17:9,8:9:365:8:308:-22.9623,0,-28.0971 dDocent_Contig_10397 7 . T A 779.322 . AB=0.175439;ABP=107.317;AC=7;AF=0.583333;AN=12;AO=41;CIGAR=1X;DP=192;DPB=192;DPRA=0;EPP=92.0407;EPPR=328.731;GTI=0;LEN=1;MEANALT=1.16667;MQM=53.7317;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.097561;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1562;QR=5743;RO=150;RPL=0;RPP=92.0407;RPPR=328.731;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=150;SRP=328.731;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:62:56,5:56:2142:5:189:0,-1.13476,-175.675 0/1:50:43,7:43:1659:7:256:-7.55182,0,-134.521 0/1:26:23,3:23:893:3:116:-2.99092,0,-72.8624 0/1:38:28,10:28:1049:10:387:-23.7484,0,-83.273 1/1:8:0,8:0:0:8:307:-25.6351,-2.40824,0 1/1:8:0,8:0:0:8:307:-23.2204,-2.40824,0 dDocent_Contig_10398 23 . G A 415.689 . AB=0.160714;ABP=170.989;AC=4;AF=0.333333;AN=12;AO=29;CIGAR=1X;DP=251;DPB=251;DPRA=0.915556;EPP=65.983;EPPR=485.077;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1168;QR=8916;RO=222;RPL=0;RPP=65.983;RPPR=485.077;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=222;SRP=485.077;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:29:25,4:25:998:4:163:-6.32856,0,-81.3803 0/0:38:36,2:36:1461:2:81:0,-3.75341,-124.047 0/1:42:38,4:38:1528:4:161:-2.23164,0,-125.111 0/1:32:20,12:20:782:12:484:-34.277,0,-61.0615 0/1:65:58,7:58:2329:7:279:-5.91308,0,-190.2 0/0:45:45,0:45:1818:0:0:0,-13.5463,-163.825 dDocent_Contig_10399 18 . C T 652.448 . AB=0.211765;ABP=125.686;AC=5;AF=0.416667;AN=12;AO=36;CIGAR=2X;DP=195;DPB=195;DPRA=1.36;EPP=81.1833;EPPR=343.931;GTI=0;LEN=1;MEANALT=1.2;MQM=52.5;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=0.972222;PAIREDR=0.968153;PAO=0;PQA=0;PQR=0;PRO=0;QA=1406;QR=6124;RO=157;RPL=0;RPP=81.1833;RPPR=343.931;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=157;SRP=343.931;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:9:7,2,0:7:273:2,0:81,0:-4.96265,0,-22.2236,-7.06986,-22.8256,-29.4949 0|1:29:23,4,2:23:892:4,2:161,82:-6.32693,0,-72.0694,-6.79324,-66.8128,-79.4574 0|0:25:25,0,0:25:956:0,0:0,0:0,-7.52575,-86.335,-7.52575,-86.335,-86.335 0|1:43:35,8,0:35:1370:8,0:313,0:-15.5293,0,-110.611,-26.0654,-113.019,-138.695 0|1:46:30,16,0:30:1183:16,0:618,0:-39.3516,0,-92.9083,-48.3825,-97.7248,-145.731 0|1:43:37,6,0:37:1450:6,0:233,0:-8.29597,0,-117.81,-19.4341,-119.616,-138.663 dDocent_Contig_10400 24 . C A 251.291 . AB=0.24;ABP=32.3686;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=204;DPB=204;DPRA=0.649351;EPP=29.068;EPPR=419.933;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.984375;PAO=0;PQA=0;PQR=0;PRO=0;QA=474;QR=7704;RO=192;RPL=0;RPP=29.068;RPPR=419.933;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=192;SRP=419.933;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:806:0:0:0,-6.0206,-72.854 0/0:54:54,0:54:2164:0:0:0,-16.2556,-194.933 0/0:32:32,0:32:1275:0:0:0,-9.63296,-115.018 0/0:48:48,0:48:1924:0:0:0,-14.4494,-173.359 0/1:31:24,7:24:969:7:272:-15.5086,0,-78.177 0/1:19:14,5:14:566:5:202:-12.8423,0,-45.5632 dDocent_Contig_10401 15 . T C 410.796 . AB=0.2;ABP=34.2795;AC=4;AF=0.333333;AN=12;AO=12;CIGAR=1M1D4M1X9M;DP=94;DPB=94.3125;DPRA=1.03571;EPP=29.068;EPPR=23.8898;GTI=0;LEN=1;MEANALT=1.75;MQM=29.4167;MQMR=59.8154;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.676923;PAO=0;PQA=0;PQR=0;PRO=0;QA=345;QR=2547;RO=65;RPL=0;RPP=29.068;RPPR=144.156;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=45;SRP=23.8898;SRR=20;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:15:13,1,1:13:515:1,1:22,39:0,-2.60014,-44.7017,-0.679488,-41.8658,-42.9594 0|1:38:27,7,4:27:1056:7,4:191,125:-5.0189,0,-84.7314,-3.07815,-76.8054,-88.7619 0|0:14:13,0,1:13:512:0,1:0,39:0,-3.91339,-46.039,-0.317855,-42.8334,-42.5324 0|0:22:12,0,10:12:464:0,10:0,376:-27.5679,-31.1802,-69.2968,0,-38.4971,-35.4868 1|1:3:0,3,0:0:0:3,0:103,0:-8.99214,-0.90309,0,-8.99214,-0.90309,-8.99214 1|0:2:0,1,1:0:0:1,1:29,29:-4.62189,-2.59863,-2.2976,-2.29821,0,-1.99718 dDocent_Contig_10402 167 . G A 756.428 . AB=0.350515;ABP=21.8372;AC=5;AF=0.416667;AN=12;AO=35;CIGAR=1X;DP=109;DPB=109;DPRA=0;EPP=79.0118;EPPR=163.699;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.716216;PAO=0;PQA=0;PQR=0;PRO=0;QA=1253;QR=2807;RO=74;RPL=35;RPP=79.0118;RPPR=163.699;RPR=0;RUN=1;SAF=0;SAP=79.0118;SAR=35;SRF=0;SRP=163.699;SRR=74;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:13,7:13:515:7:273:-18.9146,0,-40.6756 0/1:31:22,9:22:858:9:317:-19.529,0,-68.2032 0/1:19:8,11:8:287:11:401:-30.6964,0,-20.441 0/1:19:13,6:13:494:6:212:-13.6909,0,-39.0762 0/0:12:11,1:11:378:1:9:0,-2.71236,-33.4425 0/1:8:7,1:7:275:1:41:-1.68633,0,-22.7098 dDocent_Contig_10403 70 . T A 971.29 . AB=0.280255;ABP=68.8599;AC=4;AF=0.333333;AN=12;AO=44;CIGAR=1X;DP=314;DPB=314;DPRA=0.5;EPP=98.5551;EPPR=589.308;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1669;QR=10287;RO=270;RPL=44;RPP=98.5551;RPPR=589.308;RPR=0;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=270;SRP=589.308;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:17:8,9:8:300:9:345:-26.291,0,-22.2383 0/1:37:30,7:30:1141:7:272:-13.7091,0,-91.8516 0/1:49:39,10:39:1504:10:393:-20.9756,0,-120.855 0/1:54:36,18:36:1375:18:659:-43.3752,0,-107.778 0/0:76:76,0:76:2871:0:0:0,-22.8783,-258.556 0/0:81:81,0:81:3096:0:0:0,-24.3834,-278.796 dDocent_Contig_10404 51 . T C 117.3 . AB=0.122222;ABP=114.576;AC=1;AF=0.0833333;AN=12;AO=28;CIGAR=1X;DP=696;DPB=696;DPRA=0.938017;EPP=63.8115;EPPR=1451.38;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997001;PAO=0;PQA=0;PQR=0;PRO=0;QA=1106;QR=26497;RO=667;RPL=28;RPP=63.8115;RPPR=1434.06;RPR=0;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=665;SRP=1434.06;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:90:79,11:79:3132:11:441:-12.9517,0,-254.872 0/0:128:125,3:125:4980:3:113:0,-27.9949,-437.55 0/0:98:90,8:90:3610:8:316:0,-0.695898,-296.122 0/0:138:131,6:131:5177:6:236:0,-19.7647,-444.234 0/0:155:155,0:155:6159:0:0:0,-46.6596,-554.092 0/0:87:87,0:87:3439:0:0:0,-26.1896,-309.567 dDocent_Contig_10405 34 . G A 3453.35 . AB=0.361644;ABP=63.6985;AC=6;AF=0.5;AN=12;AO=132;CIGAR=1X;DP=365;DPB=365;DPRA=0;EPP=289.645;EPPR=508.963;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.606061;PAIREDR=0.699571;PAO=0;PQA=0;PQR=0;PRO=0;QA=5162;QR=9266;RO=233;RPL=0;RPP=289.645;RPPR=508.963;RPR=132;RUN=1;SAF=132;SAP=289.645;SAR=0;SRF=233;SRP=508.963;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:72:37,35:37:1438:35:1332:-98.4682,0,-107.993 0/1:63:48,15:48:1918:15:598:-35.1942,0,-153.855 0/1:53:36,17:36:1426:17:670:-44.6719,0,-112.645 0/1:54:48,6:48:1928:6:241:-5.81047,0,-157.463 0/1:55:26,29:26:1038:29:1148:-87.0428,0,-77.1543 0/1:68:38,30:38:1518:30:1173:-85.3691,0,-116.393 dDocent_Contig_10406 65 . A T 405.028 . AB=0.375;ABP=8.43898;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=732;DPB=732;DPRA=0.289017;EPP=35.5824;EPPR=1559.96;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=597;QR=28020;RO=717;RPL=15;RPP=35.5824;RPPR=1559.96;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=717;SRP=1559.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:665:0:0:0,-5.11751,-60.1797 0/1:40:25,15:25:989:15:597:-42.0257,0,-77.2712 0/0:12:12,0:12:475:0:0:0,-3.61236,-43.0999 0/0:14:14,0:14:558:0:0:0,-4.21442,-50.5627 0/0:371:371,0:371:14390:0:0:0,-111.682,-1294.1 0/0:278:278,0:278:10943:0:0:0,-83.6863,-984.197 dDocent_Contig_10407 29 . C T 986.943 . AB=0.418605;ABP=7.95924;AC=2;AF=0.166667;AN=12;AO=36;CIGAR=1X;DP=259;DPB=259;DPRA=0.99422;EPP=81.1833;EPPR=487.249;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.722222;PAIREDR=0.766816;PAO=0;PQA=0;PQR=0;PRO=0;QA=1413;QR=8899;RO=223;RPL=0;RPP=81.1833;RPPR=487.249;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=223;SRP=487.249;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:40,0:40:1603:0:0:0,-12.0412,-144.504 0/0:47:47,0:47:1879:0:0:0,-14.1484,-169.308 0/0:41:41,0:41:1643:0:0:0,-12.3422,-148.097 0/0:45:45,0:45:1803:0:0:0,-13.5463,-162.482 0/1:47:30,17:30:1191:17:649:-44.5781,0,-93.3205 0/1:39:20,19:20:780:19:764:-57.338,0,-58.7684 dDocent_Contig_10409 60 . C A 155.882 . AB=0.0582524;ABP=177.592;AC=0;AF=0;AN=12;AO=6;CIGAR=1M1X3M;DP=505;DPB=521.8;DPRA=1.23724;EPP=16.0391;EPPR=1019.26;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=59.8462;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.980769;PAO=0;PQA=0;PQR=0;PRO=0;QA=246;QR=18418;RO=468;RPL=6;RPP=16.0391;RPPR=1019.26;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=468;SRP=1019.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:63:60,3,0:60:2364:3,0:113,0:0,-8.4271,-202.4,-18.0618,-203.303,-212.561 0|0:103:86,11,6:86:3414:11,6:421,246:-8.63929,0,-277.725,-14.2138,-260.731,-293.468 0|0:69:59,9,0:59:2299:9,0:341,0:-10.1708,0,-186.21,-27.9315,-188.919,-216.868 0|0:72:68,4,0:68:2670:4,0:154,0:0,-7.44384,-226.213,-20.47,-227.417,-240.058 0|0:100:100,0,0:100:3973:0,0:0,0:0,-30.103,-356.953,-30.103,-356.953,-356.953 0|0:98:95,1,0:95:3698:1,0:36,0:0,-25.5905,-329.096,-28.5978,-329.397,-332.335 dDocent_Contig_10410 39 . A T 51.5143 . AB=0.116667;ABP=79.5909;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=1X;DP=164;DPB=164;DPRA=1.15385;EPP=18.2106;EPPR=343.931;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.857143;PAIREDR=0.585987;PAO=0;PQA=0;PQR=0;PRO=0;QA=285;QR=6164;RO=157;RPL=0;RPP=18.2106;RPPR=343.931;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=157;SRP=343.931;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:924:0:0:0,-6.92369,-83.4647 0/0:40:40,0:40:1542:0:0:0,-12.0412,-139.011 0/0:19:19,0:19:734:0:0:0,-5.71957,-66.3734 0/0:22:22,0:22:861:0:0:0,-6.62266,-77.7931 0/1:27:24,3:24:943:3:122:-3.24468,0,-77.0306 0/1:33:29,4:29:1160:4:163:-5.12444,0,-94.7483 dDocent_Contig_10411 65 . C T 135.069 . AB=0.141026;ABP=90.3146;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=295;DPB=295;DPRA=1.49112;EPP=33.4109;EPPR=613.194;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.412811;PAO=0;PQA=0;PQR=0;PRO=0;QA=540;QR=11138;RO=281;RPL=14;RPP=33.4109;RPPR=39.8017;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=175;SRP=39.8017;SRR=106;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:58:58,0:58:2261:0:0:0,-17.4597,-203.652 0/1:78:67,11:67:2684:11:424:-15.0298,0,-218.196 0/0:22:22,0:22:890:0:0:0,-6.62266,-80.4071 0/0:48:45,3:45:1782:3:116:0,-3.63173,-149.778 0/0:40:40,0:40:1578:0:0:0,-12.0412,-142.262 0/0:49:49,0:49:1943:0:0:0,-14.7505,-175.074 dDocent_Contig_10413 5 . T A 132.652 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=4;CIGAR=1X7I3M1X2M1X;DP=4;DPB=7.5;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=54.5;MQMR=0;NS=1;NUMALT=1;ODDS=7.37776;PAIRED=0.75;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=146;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:4:0,4:0:0:4:146:-13.2649,-1.20412,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_10414 86 . G A 1513.07 . AB=0.512397;ABP=3.17181;AC=2;AF=0.166667;AN=12;AO=65;CIGAR=1X;DP=295;DPB=295;DPRA=1.0922;EPP=144.156;EPPR=502.449;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.995652;PAO=0;PQA=0;PQR=0;PRO=0;QA=2221;QR=7925;RO=230;RPL=65;RPP=144.156;RPPR=502.449;RPR=0;RUN=1;SAF=65;SAP=144.156;SAR=0;SRF=230;SRP=502.449;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:794:0:0:0,-6.92369,-71.778 0/0:58:58,0:58:1959:0:0:0,-17.4597,-176.585 0/0:60:60,0:60:2106:0:0:0,-18.0618,-189.812 0/0:33:30,3:30:1045:3:106:0,-0.0448928,-84.4695 0/1:74:21,53:21:731:53:1809:-140.808,0,-43.8348 0/1:47:38,9:38:1290:9:306:-13.7199,0,-102.245 dDocent_Contig_10415 125 . T A 999.781 . AB=0.257485;ABP=88.3219;AC=4;AF=0.333333;AN=12;AO=43;CIGAR=1X;DP=174;DPB=174;DPRA=11.9286;EPP=96.3836;EPPR=287.473;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1733;QR=4749;RO=131;RPL=0;RPP=96.3836;RPPR=287.473;RPR=43;RUN=1;SAF=0;SAP=96.3836;SAR=43;SRF=0;SRP=287.473;SRR=131;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:6:6,0:6:222:0:0:0,-1.80618,-20.3381 0/1:67:59,8:59:2142:8:325:-9.45042,0,-172.869 0/1:66:43,23:43:1572:23:922:-63.4148,0,-121.898 0/1:31:21,10:21:747:10:404:-27.3879,0,-58.2205 0/0:1:1,0:1:37:0:0:0,-0.30103,-3.69783 0/1:3:1,2:1:29:2:82:-6.87659,0,-1.99657 dDocent_Contig_10417 168 . A G 59.3491 . AB=0.333333;ABP=5.18177;AC=3;AF=0.25;AN=12;AO=3;CIGAR=3M1X6M1X4M;DP=78;DPB=78.1333;DPRA=0.259615;EPP=9.52472;EPPR=150.67;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.970588;PAO=0;PQA=0;PQR=0;PRO=0;QA=120;QR=2609;RO=68;RPL=3;RPP=9.52472;RPPR=150.67;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=150.67;SRR=68;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:17:15,2,0:15:575:2,0:79,0:-2.38012,0,-46.9697,-6.89557,-47.5718,-54.0741 0|0:17:16,0,0:16:620:0,0:0,0:0,-4.81648,-56.0263,-4.81648,-56.0263,-56.0263 0|0:20:20,0,0:20:776:0,0:0,0:0,-6.0206,-70.1598,-6.0206,-70.1598,-70.1598 0|0:15:13,0,0:13:489:0,0:0,0:0,-3.91339,-44.0401,-3.91339,-44.0401,-44.0401 0|1:4:1,0,2:1:35:0,2:0,79:-6.20285,-6.50388,-9.34085,0,-2.82784,-2.22578 0|1:5:3,0,1:3:114:0,1:0,41:-2.48626,-3.38935,-12.7228,0,-9.33372,-9.03269 dDocent_Contig_10418 42 . C T 122.738 . AB=0.230769;ABP=19.3799;AC=1;AF=0.1;AN=10;AO=6;CIGAR=1X;DP=93;DPB=93;DPRA=1.55224;EPP=16.0391;EPPR=191.928;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.988506;PAO=0;PQA=0;PQR=0;PRO=0;QA=237;QR=3409;RO=87;RPL=0;RPP=16.0391;RPPR=191.928;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=87;SRP=191.928;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:643:0:0:0,-5.11751,-58.1861 0/0:27:27,0:27:1072:0:0:0,-8.12781,-96.7695 0/1:26:20,6:20:781:6:237:-13.8756,0,-62.7743 0/0:21:21,0:21:831:0:0:0,-6.32163,-75.1005 ./.:.:.:.:.:.:.:. 0/0:2:2,0:2:82:0:0:0,-0.60206,-7.77968 dDocent_Contig_10419 8 . T A 335.595 . AB=0.307692;ABP=19.7139;AC=3;AF=0.25;AN=12;AO=17;CIGAR=1X;DP=122;DPB=122;DPRA=0.570175;EPP=39.9253;EPPR=231.015;GTI=0;LEN=1;MEANALT=1;MQM=52.8235;MQMR=59.8286;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990476;PAO=0;PQA=0;PQR=0;PRO=0;QA=652;QR=4043;RO=105;RPL=0;RPP=39.9253;RPPR=231.015;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=105;SRP=231.015;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:1:1,0:1:39:0:0:0,-0.30103,-3.89656 0/1:24:19,5:19:731:5:190:-8.46836,0,-58.8952 0/1:18:13,5:13:506:5:195:-12.4719,0,-40.3138 0/1:10:4,6:4:154:6:228:-17.84,0,-11.2232 0/0:13:12,1:12:464:1:39:0,-0.0241627,-38.2219 0/0:56:56,0:56:2149:0:0:0,-16.8577,-193.637 dDocent_Contig_10420 16 . A T 128.207 . AB=0.189189;ABP=34.0565;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=323;DPB=323;DPRA=0.48;EPP=35.5824;EPPR=671.824;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993506;PAO=0;PQA=0;PQR=0;PRO=0;QA=590;QR=11913;RO=308;RPL=0;RPP=35.5824;RPPR=671.824;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=308;SRP=671.824;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:35,1:35:1358:1:40:0,-6.8414,-118.499 0/0:49:46,3:46:1770:3:116:0,-3.93276,-148.713 0/1:37:30,7:30:1159:7:279:-14.3436,0,-93.4618 0/0:38:37,1:37:1423:1:38:0,-7.64187,-124.532 0/0:95:95,0:95:3676:0:0:0,-28.5978,-330.923 0/0:68:65,3:65:2527:3:117:0,-9.56013,-216.681 dDocent_Contig_10421 35 . G A 1177.94 . AB=0.384615;ABP=16.5402;AC=4;AF=0.4;AN=10;AO=45;CIGAR=1X;DP=148;DPB=148;DPRA=0.943548;EPP=100.727;EPPR=226.672;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.866667;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1766;QR=4059;RO=103;RPL=0;RPP=100.727;RPPR=226.672;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=103;SRP=226.672;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:19,3:19:750:3:108:-3.44803,0,-61.1996 0/1:54:30,24:30:1185:24:952:-69.7311,0,-90.6705 0/1:29:21,8:21:829:8:307:-19.2549,0,-66.1918 0/0:31:31,0:31:1215:0:0:0,-9.33193,-109.615 ./.:.:.:.:.:.:.:. 0/1:12:2,10:2:80:10:399:-32.6572,0,-3.97943 dDocent_Contig_10423 29 . T C 87.8656 . AB=0.137255;ABP=61.2994;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=344;DPB=344;DPRA=0.764103;EPP=22.5536;EPPR=730.454;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.222222;PAIREDR=0.397015;PAO=0;PQA=0;PQR=0;PRO=0;QA=362;QR=13479;RO=335;RPL=0;RPP=22.5536;RPPR=730.454;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=335;SRP=730.454;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:63:63,0:63:2548:0:0:0,-18.9649,-229.443 0/0:78:78,0:78:3148:0:0:0,-23.4803,-283.376 0/0:54:54,0:54:2147:0:0:0,-16.2556,-193.407 0/0:54:53,1:53:2146:1:40:0,-12.2599,-189.313 0/0:44:43,1:43:1726:1:41:0,-9.15075,-151.467 0/1:51:44,7:44:1764:7:281:-10.3094,0,-143.621 dDocent_Contig_10425 10 . T C 2900.17 . AB=0.212077;ABP=491.931;AC=6;AF=0.5;AN=12;AO=144;CIGAR=1X;DP=679;DPB=679;DPRA=0;EPP=315.702;EPPR=1164.75;GTI=0;LEN=1;MEANALT=1;MQM=56.8819;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.416667;PAIREDR=0.491589;PAO=0;PQA=0;PQR=0;PRO=0;QA=5736;QR=21330;RO=535;RPL=0;RPP=315.702;RPPR=1164.75;RPR=144;RUN=1;SAF=144;SAP=315.702;SAR=0;SRF=535;SRP=1164.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:80:65,15:65:2589:15:599:-27.953,0,-209.048 0/1:157:124,33:124:4939:33:1314:-68.8423,0,-397.128 0/1:97:81,16:81:3219:16:649:-29.4518,0,-260.558 0/1:130:96,34:96:3829:34:1360:-77.3735,0,-305.482 0/1:106:86,20:86:3408:20:790:-39.5106,0,-274.857 0/1:109:83,26:83:3346:26:1024:-58.108,0,-268.373 dDocent_Contig_10427 7 . T C 4625.47 . AB=0.415301;ABP=14.4135;AC=9;AF=0.75;AN=12;AO=76;CIGAR=1X3M;DP=217;DPB=215.75;DPRA=0;EPP=168.042;EPPR=102.898;GTI=0;LEN=1;MEANALT=2.2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2932;QR=1746;RO=46;RPL=0;RPP=168.042;RPPR=102.898;RPR=76;RUN=1;SAF=76;SAP=168.042;SAR=0;SRF=46;SRP=102.898;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:30:0,0,23,7:0:0:0,23,7:0,873,264:-93.6015,-93.6015,-93.6015,-22.0116,-22.0116,-15.0879,-71.9673,-71.9673,0,-69.8601 0|1:34:9,1,24,0:9:348:1,24,0:39,911,0:-71.9831,-71.4861,-99.7714,0,-25.3752,-21.3567,-74.6923,-100.072,-28.5815,-103.279 1|1:67:7,0,11,49:7:261:0,11,49:0,417,1896:-166.475,-168.582,-189.947,-134.394,-155.759,-152.447,-12.8295,-34.1936,0,-19.4431 1|1:13:0,4,7,2:0:0:4,7,2:156,269,78:-34.904,-22.0791,-20.875,-12.8235,0,-10.7163,-28.4917,-15.6661,-6.41176,-27.8896 0|1:23:9,0,1,13:9:343:0,1,13:0,39,502:-38.5161,-41.2254,-69.3606,-38.0192,-66.1544,-65.8534,0,-28.1293,-24.9226,-24.216 0|1:50:21,0,24,5:21:794:0,24,5:0,910,192:-68.2889,-74.6105,-139.693,0,-65.0783,-57.8536,-58.8484,-123.931,-49.3159,-122.426 dDocent_Contig_10428 11 . C T 131.824 . AB=0.189189;ABP=34.0565;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=188;DPB=188;DPRA=1.22517;EPP=18.2106;EPPR=396.047;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=283;QR=7170;RO=181;RPL=0;RPP=18.2106;RPPR=396.047;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=181;SRP=396.047;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:952:0:0:0,-7.22472,-85.9781 0/1:37:30,7:30:1189:7:283:-14.7053,0,-96.1511 0/0:23:23,0:23:904:0:0:0,-6.92369,-81.6602 0/0:31:31,0:31:1232:0:0:0,-9.33193,-111.152 0/0:41:41,0:41:1638:0:0:0,-12.3422,-147.656 0/0:32:32,0:32:1255:0:0:0,-9.63296,-113.218 dDocent_Contig_10429 95 . A C 166.67 . AB=0.244898;ABP=30.7077;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=109;DPB=109;DPRA=1.59524;EPP=31.2394;EPPR=211.472;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.958333;PAO=0;PQA=0;PQR=0;PRO=0;QA=411;QR=3178;RO=96;RPL=13;RPP=31.2394;RPPR=211.472;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=96;SRP=211.472;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:17,1:17:569:1:33:0,-2.1194,-48.2302 0/1:22:16,6:16:511:6:203:-11.9797,0,-39.6755 0/1:27:21,6:21:695:6:175:-7.90913,0,-54.7344 0/0:20:20,0:20:653:0:0:0,-6.0206,-59.0809 0/0:11:11,0:11:379:0:0:0,-3.31133,-34.4422 0/0:11:11,0:11:371:0:0:0,-3.31133,-33.716 dDocent_Contig_10430 9 . A T 65.867 . AB=0.107438;ABP=164.973;AC=1;AF=0.0833333;AN=12;AO=27;CIGAR=1X;DP=604;DPB=604;DPRA=2.775;EPP=61.6401;EPPR=1255.95;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1036;QR=21902;RO=577;RPL=0;RPP=61.6401;RPPR=1255.95;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=577;SRP=1255.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:185:172,13:172:6480:13:506:0,-9.80122,-537.251 0/0:62:62,0:62:2329:0:0:0,-18.6639,-209.828 0/0:138:137,1:137:5242:1:39:0,-37.6456,-467.89 0/1:121:108,13:108:4108:13:491:-8.10957,0,-333.392 0/0:69:69,0:69:2639:0:0:0,-20.7711,-237.703 0/0:29:29,0:29:1104:0:0:0,-8.72987,-99.6637 dDocent_Contig_10431 8 . T G 4588.98 . AB=0.0328947;ABP=291.073;AC=0;AF=0;AN=12;AO=5;CIGAR=1X2M1X;DP=620;DPB=620;DPRA=0;EPP=13.8677;EPPR=941.086;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=193;QR=16755;RO=432;RPL=0;RPP=13.8677;RPPR=941.086;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=432;SRP=941.086;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:87:63,0,24:63:2431:0,24:0,971:-61.4968,-80.4617,-280.078,0,-200.016,-192.791 0|0:81:55,1,25:55:2131:1,25:40,1003:-66.0809,-79.3426,-254.096,0,-171.756,-167.526 0|0:71:50,4,17:50:1943:4,17:153,670:-40.0716,-42.5713,-201.023,0,-147.112,-154.548 0|0:91:70,0,21:70:2692:0,21:0,839:-48.4277,-69.4998,-290.485,0,-221.381,-215.059 0|0:150:104,0,45:104:4037:0,45:0,1793:-116.365,-147.672,-479.362,0,-331.724,-318.177 0|0:140:90,0,50:90:3521:0,50:0,1996:-137.677,-164.77,-454.269,0,-289.895,-274.843 dDocent_Contig_10433 17 . C G 73.8098 . AB=0.102941;ABP=189.246;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=557;DPB=557;DPRA=1.48661;EPP=46.4397;EPPR=1166.92;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.970149;PAO=0;PQA=0;PQR=0;PRO=0;QA=786;QR=21102;RO=536;RPL=0;RPP=46.4397;RPPR=1166.92;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=536;SRP=1166.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:65:65,0:65:2528:0:0:0,-19.5669,-227.674 0/0:89:87,2:87:3424:2:79:0,-19.294,-300.73 0/0:68:68,0:68:2682:0:0:0,-20.47,-241.505 0/0:91:91,0:91:3592:0:0:0,-27.3937,-323.324 0/1:136:122,14:122:4796:14:550:-8.90386,0,-390.64 0/0:108:103,4:103:4080:4:157:0,-17.9318,-352.734 dDocent_Contig_10435 7 . T C 1150.17 . AB=0.229508;ABP=158.075;AC=4;AF=0.333333;AN=12;AO=60;CIGAR=1X;DP=348;DPB=348;DPRA=1.45714;EPP=133.299;EPPR=628.394;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.366667;PAIREDR=0.635417;PAO=0;PQA=0;PQR=0;PRO=0;QA=2315;QR=11039;RO=288;RPL=0;RPP=133.299;RPPR=628.394;RPR=60;RUN=1;SAF=60;SAP=133.299;SAR=0;SRF=288;SRP=628.394;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:48:41,7:41:1568:7:270:-10.2161,0,-126.935 0/0:62:58,4:58:2219:4:156:0,-4.24657,-185.518 0/0:42:42,0:42:1610:0:0:0,-12.6433,-145.165 0/1:71:59,12:59:2259:12:462:-20.5576,0,-182.155 0/1:61:43,18:43:1646:18:694:-44.4306,0,-130.042 0/1:64:45,19:45:1737:19:733:-47.0349,0,-137.321 dDocent_Contig_10436 12 . A G 297.143 . AB=0.27907;ABP=21.2406;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=220;DPB=220;DPRA=1.89381;EPP=33.4109;EPPR=450.334;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995146;PAO=0;PQA=0;PQR=0;PRO=0;QA=568;QR=8118;RO=206;RPL=0;RPP=33.4109;RPPR=450.334;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=206;SRP=450.334;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:994:0:0:0,-7.52575,-89.7561 0/0:21:21,0:21:830:0:0:0,-6.32163,-75.0137 0/0:17:17,0:17:680:0:0:0,-5.11751,-61.5307 0/0:50:50,0:50:1992:0:0:0,-15.0515,-179.473 0/1:43:31,12:31:1206:12:487:-31.2372,0,-95.8632 0/0:64:62,2:62:2416:2:81:0,-11.5802,-209.912 dDocent_Contig_10437 15 . C A 939.957 . AB=0.283582;ABP=57.524;AC=3;AF=0.25;AN=12;AO=40;CIGAR=1X;DP=288;DPB=288;DPRA=0.652;EPP=89.8692;EPPR=541.535;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1620;QR=9953;RO=248;RPL=0;RPP=89.8692;RPPR=541.535;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=248;SRP=541.535;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:14,14:14:566:14:571:-43.303,0,-42.8523 0/1:57:40,17:40:1603:17:683:-44.6405,0,-127.334 0/0:29:27,2:27:1083:2:81:0,-1.04414,-90.0709 0/1:49:42,7:42:1680:7:285:-11.2739,0,-136.676 0/0:59:59,0:59:2371:0:0:0,-17.7608,-213.54 0/0:66:66,0:66:2650:0:0:0,-19.868,-238.614 dDocent_Contig_10438 29 . G A 56.0875 . AB=0.109589;ABP=99.6557;AC=1;AF=0.0833333;AN=12;AO=24;CIGAR=1X;DP=462;DPB=462;DPRA=1.42105;EPP=55.1256;EPPR=842.386;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.25;PAIREDR=0.768879;PAO=0;PQA=0;PQR=0;PRO=0;QA=961;QR=16851;RO=437;RPL=0;RPP=55.1256;RPPR=951.944;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=424;SRP=842.386;SRR=13;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:73:65,8:65:2500:8:316:-6.83059,0,-203.196 0/0:96:93,3:93:3483:3:122:0,-17.5264,-302.196 0/0:55:53,2:53:2036:2:81:0,-8.87092,-175.758 0/0:95:87,7:87:3411:7:285:0,-2.48949,-281.065 0/0:57:57,0:57:2217:0:0:0,-17.1587,-199.722 0/0:86:82,4:82:3204:4:157:0,-11.3809,-273.949 dDocent_Contig_10441 60 . C T 3023.69 . AB=0.336815;ABP=91.5984;AC=6;AF=0.5;AN=12;AO=129;CIGAR=1X;DP=383;DPB=383;DPRA=0;EPP=283.13;EPPR=554.564;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.821705;PAIREDR=0.716535;PAO=0;PQA=0;PQR=0;PRO=0;QA=4744;QR=9305;RO=254;RPL=61;RPP=3.83512;RPPR=3.55744;RPR=68;RUN=1;SAF=61;SAP=3.83512;SAR=68;SRF=131;SRP=3.55744;SRR=123;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:81:71,10:71:2539:10:356:-7.99518,0,-204.35 0/1:57:49,8:49:1771:8:293:-9.56283,0,-142.509 0/1:42:20,22:20:745:22:803:-59.9462,0,-54.7323 0/1:55:44,11:44:1651:11:401:-19.8748,0,-132.304 0/1:58:20,38:20:741:38:1421:-110.717,0,-49.5583 0/1:90:50,40:50:1858:40:1470:-105.494,0,-140.388 dDocent_Contig_10442 7 . T C 801.048 . AB=0.0869565;ABP=446.085;AC=3;AF=0.25;AN=12;AO=43;CIGAR=1X2M;DP=678;DPB=678;DPRA=0;EPP=96.3836;EPPR=1219.03;GTI=0;LEN=1;MEANALT=3;MQM=55.5116;MQMR=57.5054;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0.341071;PAO=0;PQA=0;PQR=0;PRO=0;QA=1613;QR=21190;RO=560;RPL=0;RPP=96.3836;RPPR=1219.03;RPR=43;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=560;SRP=1219.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:66:46,5,11,4:46:1735:5,11,4:194,404,156:-18.8495,-16.7674,-156.81,0,-125.607,-138.222,-19.8697,-145.491,-128.709,-160.213 0|1:104:63,25,7,7:63:2383:25,7,7:952,273,269:-58.9579,0,-185.374,-55.6092,-170.586,-246.407,-55.8395,-170.816,-226.43,-246.637 0|0:67:59,5,3,0:59:2222:5,3,0:194,117,0:0,-1.99134,-181.634,-8.16566,-173.545,-188.415,-17.7608,-183.139,-189.319,-198.912 0|1:129:107,13,8,0:107:4061:13,8,0:498,288,0:-7.51921,0,-327.317,-16.5103,-308.007,-345.319,-39.7294,-331.231,-347.727,-370.951 0|0:157:146,3,7,0:146:5501:3,7,0:116,260,0:0,-34.4175,-483.192,-22.6879,-462.867,-470.279,-43.9504,-484.095,-472.387,-493.615 0|0:155:139,8,7,0:139:5288:8,7,0:309,271,0:0,-16.7465,-440.505,-19.586,-420.658,-443.649,-41.8432,-442.913,-445.756,-468.011 dDocent_Contig_10443 40 . T A 816.527 . AB=0.264706;ABP=68.4099;AC=5;AF=0.416667;AN=12;AO=36;CIGAR=1X;DP=151;DPB=151;DPRA=1.81333;EPP=81.1833;EPPR=252.73;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.611111;PAIREDR=0.504348;PAO=0;PQA=0;PQR=0;PRO=0;QA=1444;QR=4602;RO=115;RPL=0;RPP=81.1833;RPPR=252.73;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=115;SRP=252.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:8,12:8:325:12:479:-37.4411,0,-23.5985 0/1:43:29,14:29:1173:14:565:-38.2482,0,-92.9 0/1:23:20,3:20:803:3:120:-4.264,0,-65.661 0/1:26:22,4:22:866:4:158:-6.77258,0,-70.422 0/1:24:21,3:21:829:3:122:-4.14777,0,-67.6929 0/0:15:15,0:15:606:0:0:0,-4.51545,-54.8766 dDocent_Contig_10445 10 . G A 728.581 . AB=0.145455;ABP=183.164;AC=6;AF=0.5;AN=12;AO=24;CIGAR=1X2M1X1M1X;DP=204;DPB=204;DPRA=0;EPP=55.1256;EPPR=346.103;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.416667;PAIREDR=0.411392;PAO=0;PQA=0;PQR=0;PRO=0;QA=864;QR=5987;RO=158;RPL=0;RPP=55.1256;RPPR=346.103;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=158;SRP=346.103;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:29:26,0,3:26:984:0,3:0,104:-0.971659,-8.79844,-89.4956,0,-81.0469,-80.1439 0|1:48:39,0,8:39:1477:0,8:0,300:-13.0765,-24.8166,-145.937,0,-121.364,-118.956 0|1:26:19,0,7:19:728:0,7:0,238:-13.9245,-19.644,-79.4248,0,-60.1322,-58.0249 0|1:36:31,0,5:31:1163:0,5:0,184:-6.07987,-15.4118,-110.683,0,-95.6403,-94.1352 0|1:26:21,4,1:21:796:4,1:139,38:-4.95232,0,-64.0597,-8.15096,-62.1472,-73.141 0|1:39:22,16,0:22:839:16,0:617,0:-44.04,0,-64.005,-50.6627,-68.8215,-119.49 dDocent_Contig_10446 9 . A T 4427.69 . AB=0.677273;ABP=63.0614;AC=4;AF=0.333333;AN=12;AO=149;CIGAR=1X;DP=288;DPB=288;DPRA=1.61765;EPP=326.56;EPPR=302.673;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5724;QR=5294;RO=138;RPL=0;RPP=326.56;RPPR=302.673;RPR=149;RUN=1;SAF=149;SAP=326.56;SAR=0;SRF=138;SRP=302.673;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:6:6,0:6:232:0:0:0,-1.80618,-21.2491 0/1:46:17,29:17:652:29:1108:-86.1744,0,-45.1697 0/1:40:4,36:4:155:36:1393:-113.606,0,-2.28424 0/1:41:24,17:24:915:17:648:-46.3137,0,-70.3248 0/1:93:25,67:25:968:67:2575:-203.86,0,-59.3494 0/0:62:62,0:62:2372:0:0:0,-18.6639,-213.691 dDocent_Contig_10448 129 . G T 304.609 . AB=0.208333;ABP=20.744;AC=3;AF=0.25;AN=12;AO=6;CIGAR=2X1M1X;DP=54;DPB=54;DPRA=0.980392;EPP=16.0391;EPPR=76.8404;GTI=0;LEN=1;MEANALT=1.66667;MQM=17.8333;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=204;QR=1096;RO=34;RPL=0;RPP=16.0391;RPPR=76.8404;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=76.8404;SRR=34;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:15:14,0,0:14:453:0,0:0,0:0,-4.21442,-40.9952,-4.21442,-40.9952,-40.9952 0|0:14:6,3,4:6:204:3,4:102,140:-9.69008,-8.06595,-23.7358,0,-13.2303,-15.4642 0|0:12:6,0,6:6:197:0,6:0,208:-15.4472,-17.2534,-33.163,0,-16.247,-14.4408 0|1:10:8,2,0:8:242:2,0:67,0:-0.468373,0,-19.0675,-2.87661,-19.6696,-22.3392 1|1:1:0,1,0:0:0:1,0:35,0:-2.08318,-0.30103,0,-2.08318,-0.30103,-2.08318 0|0:2:0,0,2:0:0:0,2:0,68:-6.45788,-6.45788,-6.45788,-0.60206,-0.60206,0 dDocent_Contig_10449 8 . T A 462.764 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=161;DPB=161;DPRA=0.439189;EPP=31.2394;EPPR=324.388;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=505;QR=5672;RO=148;RPL=0;RPP=31.2394;RPPR=324.388;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=148;SRP=324.388;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:36,0:36:1386:0:0:0,-10.8371,-125.021 0/0:60:60,0:60:2288:0:0:0,-18.0618,-206.133 0/0:24:24,0:24:928:0:0:0,-7.22472,-83.8356 0/0:26:26,0:26:992:0:0:0,-7.82678,-89.59 1/1:13:0,13:0:0:13:505:-45.7991,-3.91339,0 0/0:2:2,0:2:78:0:0:0,-0.60206,-7.40347 dDocent_Contig_10450 131 . T C 870.625 . AB=0.364486;ABP=20.0777;AC=4;AF=0.333333;AN=12;AO=41;CIGAR=1X;DP=144;DPB=144;DPRA=1.49412;EPP=92.0407;EPPR=222.329;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1448;QR=3731;RO=101;RPL=0;RPP=92.0407;RPPR=222.329;RPR=41;RUN=1;SAF=0;SAP=92.0407;SAR=41;SRF=0;SRP=222.329;SRR=101;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:18,3:18:657:3:91:-2.16763,0,-53.1353 0/1:35:19,16:19:724:16:576:-41.6355,0,-54.9555 0/0:20:17,2:17:628:2:58:0,-0.574692,-51.3034 0/1:29:20,8:20:716:8:287:-17.4749,0,-56.0645 0/0:17:17,0:17:633:0:0:0,-5.11751,-57.3045 0/1:22:10,12:10:373:12:436:-32.9597,0,-27.2972 dDocent_Contig_10451 68 . A G 187.926 . AB=0.285714;ABP=14.1779;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=309;DPB=309;DPRA=0.498221;EPP=20.3821;EPPR=656.623;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=312;QR=11705;RO=301;RPL=8;RPP=20.3821;RPPR=656.623;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=301;SRP=656.623;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:20,8:20:771:8:312:-20.0144,0,-61.2798 0/0:92:92,0:92:3610:0:0:0,-27.6948,-324.96 0/0:73:73,0:73:2768:0:0:0,-21.9752,-249.248 0/0:67:67,0:67:2647:0:0:0,-20.169,-238.366 0/0:21:21,0:21:799:0:0:0,-6.32163,-72.2207 0/0:28:28,0:28:1110:0:0:0,-8.42884,-100.189 dDocent_Contig_10452 14 . G A 1080.68 . AB=0.133333;ABP=90.593;AC=8;AF=0.666667;AN=12;AO=10;CIGAR=1M2X3M1X4M1I1X4M;DP=175;DPB=173.375;DPRA=0;EPP=24.725;EPPR=105.07;GTI=0;LEN=1;MEANALT=9.5;MQM=18;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=180;QR=1831;RO=47;RPL=0;RPP=24.725;RPPR=105.07;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=47;SRP=105.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:29:15,2,0,3,4,1,0,1,0,0:15:584:2,0,3,4,1,0,1,0,0:80,0,120,120,41,0,30,0,0:-4.98833,-2.90385,-50.3316,-9.50378,-50.9337,-57.5264,0,-41.4392,-48.0324,-47.1293,-1.01924,-42.437,-49.0287,-39.5364,-47.8246,-6.11443,-47.5478,-54.1407,-44.6465,-45.6435,-53.8397,-9.50378,-50.9337,-57.5264,-48.0324,-49.0287,-54.1407,-57.5264,-7.10836,-48.5376,-55.1301,-45.6363,-46.6335,-51.7445,-55.1301,-54.8291,-9.50378,-50.9337,-57.5264,-48.0324,-49.0287,-54.1407,-57.5264,-55.1301,-57.5264,-9.50378,-50.9337,-57.5264,-48.0324,-49.0287,-54.1407,-57.5264,-55.1301,-57.5264,-57.5264 0|1:31:16,0,2,1,0,7,3,0,0,0:16:621:0,2,1,0,7,3,0,0,0:0,71,40,0,250,116,0,0,0:-15.5544,-20.3709,-71.4052,-14.6183,-65.6524,-65.0504,-17.2014,-68.2369,-62.4842,-67.9358,-20.3709,-71.4052,-65.6524,-68.2369,-71.4052,0,-51.0334,-45.2817,-47.8653,-51.0334,-48.9262,-11.0361,-62.0738,-56.3212,-58.9054,-62.0738,-41.7027,-61.1707,-20.3709,-71.4052,-65.6524,-68.2369,-71.4052,-51.0334,-62.0738,-71.4052,-20.3709,-71.4052,-65.6524,-68.2369,-71.4052,-51.0334,-62.0738,-71.4052,-71.4052,-20.3709,-71.4052,-65.6524,-68.2369,-71.4052,-51.0334,-62.0738,-71.4052,-71.4052,-71.4052 0|1:36:5,2,2,1,2,9,2,0,8,4:5:196:2,2,1,2,9,2,0,8,4:70,68,35,60,344,72,0,144,163:-26.7525,-22.5597,-38.0891,-22.8573,-33.2917,-38.3866,-25.5665,-36.0005,-36.2979,-41.3963,-24.0036,-34.4376,-34.7351,-37.4437,-39.5322,0,-10.4409,-10.7387,-13.4485,-11.8857,-13.4308,-22.3868,-32.8213,-33.1188,-35.8276,-34.2647,-10.2679,-37.9163,-28.2576,-38.6912,-38.9886,-41.6973,-40.1343,-16.1401,-38.5184,-44.3879,-19.9025,-30.333,-30.6307,-33.3376,-31.7775,-7.79241,-30.16,-36.0266,-33.6184,-14.7953,-25.2317,-25.5293,-28.2384,-26.6754,-2.67351,-25.0588,-30.9295,-22.5724,-29.7253 0|1:39:11,0,3,4,4,5,3,3,2,1:11:430:0,3,4,4,5,3,3,2,1:0,109,147,115,183,119,115,36,40:-11.651,-14.9623,-50.3312,-6.28003,-41.6511,-40.748,-3.24571,-38.6178,-29.9375,-37.4137,-6.74759,-42.1146,-33.4353,-30.4023,-40.9105,0,-35.3735,-26.6931,-23.6596,-27.1583,-33.8684,-5.21026,-40.5827,-31.9022,-28.8687,-32.3666,-25.6242,-39.6796,-5.51832,-40.8904,-32.2099,-29.1765,-32.6744,-25.932,-31.1413,-39.9873,-12.8741,-48.2396,-39.5604,-36.5275,-40.0249,-33.2835,-38.4919,-38.7996,-47.6376,-11.6648,-47.0348,-38.3545,-35.3212,-38.8183,-32.0769,-37.2861,-37.5938,-44.9435,-46.7337 1|1:17:0,1,3,0,6,3,1,0,0,0:0:0:1,3,0,6,3,1,0,0,0:40,119,0,175,117,40,0,0,0:-22.2072,-18.9081,-18.607,-12.4408,-9.13968,-11.5377,-22.2072,-18.9081,-12.4408,-22.2072,-9.76201,-6.46415,0,-9.76201,-7.95583,-12.5787,-9.27769,-2.8055,-12.5787,-0.138749,-11.6756,-19.1769,-15.8773,-9.40898,-19.1769,-6.73414,-9.54699,-18.8759,-22.2072,-18.9081,-12.4408,-22.2072,-9.76201,-12.5787,-19.1769,-22.2072,-22.2072,-18.9081,-12.4408,-22.2072,-9.76201,-12.5787,-19.1769,-22.2072,-22.2072,-22.2072,-18.9081,-12.4408,-22.2072,-9.76201,-12.5787,-19.1769,-22.2072,-22.2072,-22.2072 1|1:23:0,3,2,9,7,2,0,0,0,0:0:0:3,2,9,7,2,0,0,0,0:119,79,307,210,73,0,0,0,0:-38.0805,-28.2742,-27.3711,-31.6005,-21.7918,-30.9984,-14.8394,-5.0252,-8.35505,-12.1302,-23.207,-13.4005,-16.7271,0,-21.0998,-32.1123,-22.3041,-25.6312,-8.8689,-17.2403,-31.5102,-38.0805,-28.2742,-31.6005,-14.8394,-23.207,-32.1123,-38.0805,-38.0805,-28.2742,-31.6005,-14.8394,-23.207,-32.1123,-38.0805,-38.0805,-38.0805,-28.2742,-31.6005,-14.8394,-23.207,-32.1123,-38.0805,-38.0805,-38.0805,-38.0805,-28.2742,-31.6005,-14.8394,-23.207,-32.1123,-38.0805,-38.0805,-38.0805,-38.0805 dDocent_Contig_10454 58 . T G 141.937 . AB=0.123894;ABP=141.85;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=2X;DP=369;DPB=369;DPRA=0.976;EPP=52.9542;EPPR=754.34;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.695652;PAIREDR=0.572254;PAO=0;PQA=0;PQR=0;PRO=0;QA=907;QR=13650;RO=346;RPL=12;RPP=3.10471;RPPR=10.2653;RPR=11;RUN=1;SAF=12;SAP=3.10471;SAR=11;SRF=190;SRP=10.2653;SRR=156;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:66:62,4:62:2429:4:150:0,-6.00537,-204.908 0|1:68:58,10:58:2278:10:398:-15.7084,0,-184.736 0|0:47:47,0:47:1822:0:0:0,-14.1484,-164.203 0|1:45:41,4:41:1620:4:158:-1.05413,0,-132.496 0|0:65:60,5:60:2386:5:201:0,-1.09606,-196.436 0|0:78:78,0:78:3115:0:0:0,-23.4803,-280.42 dDocent_Contig_10455 86 . C T 564.442 . AB=0.365854;ABP=15.8273;AC=5;AF=0.416667;AN=12;AO=30;CIGAR=1X;DP=97;DPB=97;DPRA=1.09333;EPP=68.1545;EPPR=148.499;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.966667;PAIREDR=0.835821;PAO=0;PQA=0;PQR=0;PRO=0;QA=986;QR=2289;RO=67;RPL=0;RPP=68.1545;RPPR=148.499;RPR=30;RUN=1;SAF=0;SAP=68.1545;SAR=30;SRF=0;SRP=148.499;SRR=67;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:6,6:6:221:6:200:-14.7153,0,-16.6328 0/1:19:11,8:11:382:8:274:-19.2745,0,-28.9946 0/1:7:5,2:5:145:2:66:-4.16097,0,-11.2283 0/1:18:8,10:8:279:10:333:-24.8753,0,-20.0305 0/0:15:15,0:15:509:0:0:0,-4.51545,-46.1334 0/1:26:22,4:22:753:4:113:-2.62269,0,-60.2617 dDocent_Contig_10456 18 . T C 910.928 . AB=0.046875;ABP=117.148;AC=0;AF=0;AN=12;AO=10;CIGAR=2X;DP=240;DPB=240;DPRA=1.75556;EPP=24.725;EPPR=413.419;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=390;QR=7528;RO=189;RPL=0;RPP=24.725;RPPR=413.419;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=189;SRP=413.419;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:64:47,3,14:47:1871:3,14:123,558:-31.7877,-35.7819,-188.936,0,-143.893,-149.832 0|0:47:43,4,0:43:1702:4,0:151,0:0,-0.195276,-139.45,-12.9443,-140.654,-153.024 0|0:30:28,0,2:28:1110:0,2:0,82:0,-8.42884,-99.7762,-1.25122,-93.0072,-92.4051 0|0:47:41,3,3:41:1634:3,3:116,122:0,-2.82602,-136.464,-2.26904,-127.303,-135.926 0|0:24:15,0,9:15:606:0,9:0,363:-25.8085,-30.3239,-80.2812,0,-50.3604,-47.6511 0|0:28:15,0,13:15:605:0,13:0,520:-38.7179,-43.2334,-93.1056,0,-50.2733,-46.3599 dDocent_Contig_10457 81 . G A 50.0572 . AB=0.172414;ABP=30.0414;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=342;DPB=342;DPRA=1.32;EPP=29.068;EPPR=719.596;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.987879;PAO=0;PQA=0;PQR=0;PRO=0;QA=428;QR=11566;RO=330;RPL=12;RPP=29.068;RPPR=719.596;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=330;SRP=719.596;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:101:99,2:99:3442:2:72:0,-23.5673,-303.161 0/0:98:94,4:94:3272:4:141:0,-16.4639,-281.67 0/0:45:45,0:45:1603:0:0:0,-13.5463,-144.554 0/0:69:68,1:68:2437:1:35:0,-17.2724,-216.072 0/1:16:14,2:14:452:2:74:-2.2094,0,-36.169 0/1:13:10,3:10:360:3:106:-5.97562,0,-28.8296 dDocent_Contig_10458 138 . T G 1081.62 . AB=0.242857;ABP=123.62;AC=5;AF=0.416667;AN=12;AO=51;CIGAR=1X;DP=220;DPB=220;DPRA=4.2;EPP=113.755;EPPR=369.989;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.960784;PAIREDR=0.710059;PAO=0;PQA=0;PQR=0;PRO=0;QA=1987;QR=6642;RO=169;RPL=0;RPP=113.755;RPPR=369.989;RPR=51;RUN=1;SAF=0;SAP=113.755;SAR=51;SRF=0;SRP=369.989;SRR=169;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:58:49,9:49:1894:9:368:-16.0256,0,-153.202 0/1:42:37,5:37:1472:5:179:-3.8102,0,-120.082 0/1:29:14,15:14:543:15:577:-43.5369,0,-40.4774 0/1:77:58,19:58:2292:19:741:-43.832,0,-183.273 0/0:10:10,0:10:400:0:0:0,-3.0103,-36.3581 0/1:4:1,3:1:41:3:122:-10.1684,0,-2.89045 dDocent_Contig_10459 1 . N G 155.796 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=161;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:80:-7.59179,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10460 14 . G A 37.547 . AB=0.25;ABP=7.35324;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=100;DPB=100;DPRA=3;EPP=11.6962;EPPR=211.472;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=163;QR=3839;RO=96;RPL=0;RPP=11.6962;RPPR=211.472;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=96;SRP=211.472;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:271:0:0:0,-2.10721,-24.7492 0/0:52:50,2:50:2019:2:82:0,-7.87388,-174.113 0/0:17:17,0:17:686:0:0:0,-5.11751,-62.0687 0/1:8:6,2:6:221:2:81:-5.27749,0,-17.8306 0/0:7:7,0:7:276:0:0:0,-2.10721,-25.2088 0/0:9:9,0:9:366:0:0:0,-2.70927,-33.3052 dDocent_Contig_10461 11 . C A 277.457 . AB=0.161616;ABP=101.472;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=2X;DP=414;DPB=414;DPRA=0.98917;EPP=44.2683;EPPR=854.227;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.989796;PAO=0;PQA=0;PQR=0;PRO=0;QA=769;QR=15614;RO=392;RPL=0;RPP=44.2683;RPPR=854.227;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=392;SRP=854.227;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:62:62,0:62:2473:0:0:0,-18.6639,-222.719 0|0:108:108,0:108:4305:0:0:0,-32.5112,-387.424 0|0:38:35,3:35:1395:3:122:0,-0.066647,-114.431 0|1:99:80,16:80:3174:16:647:-29.2679,0,-256.448 0|0:74:74,0:74:2965:0:0:0,-22.2762,-266.951 0|0:33:33,0:33:1302:0:0:0,-9.93399,-117.45 dDocent_Contig_10462 12 . A C 12004.9 . AB=0.675485;ABP=154.673;AC=6;AF=0.5;AN=12;AO=383;CIGAR=1X;DP=567;DPB=567;DPRA=0;EPP=834.684;EPPR=400.39;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.89295;PAIREDR=0.934426;PAO=0;PQA=0;PQR=0;PRO=0;QA=15349;QR=7254;RO=183;RPL=0;RPP=834.684;RPPR=400.39;RPR=383;RUN=1;SAF=383;SAP=834.684;SAR=0;SRF=183;SRP=400.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:70:54,15:54:2160:15:609:-34.2751,0,-173.718 0/1:67:20,47:20:801:47:1874:-148.698,0,-52.2383 0/1:62:34,28:34:1347:28:1133:-83.5867,0,-102.828 0/1:52:30,22:30:1175:22:870:-62.9575,0,-90.3797 0/1:230:26,204:26:1018:204:8173:-665.869,0,-22.6809 0/1:86:19,67:19:753:67:2690:-216.33,0,-42.2033 dDocent_Contig_10463 131 . G A 32.9155 . AB=0.157895;ABP=22.325;AC=2;AF=0.2;AN=10;AO=3;CIGAR=1X;DP=41;DPB=41;DPRA=1.29545;EPP=9.52472;EPPR=85.5263;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.763158;PAO=0;PQA=0;PQR=0;PRO=0;QA=121;QR=1548;RO=38;RPL=3;RPP=9.52472;RPPR=85.5263;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=85.5263;SRR=38;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:10:9,1:9:367:1:41:-1.08427,0,-30.385 0/0:6:6,0:6:246:0:0:0,-1.80618,-22.5201 0/1:9:7,2:7:284:2:80:-4.88252,0,-23.2245 0/0:15:15,0:15:610:0:0:0,-4.51545,-55.2376 0/0:1:1,0:1:41:0:0:0,-0.30103,-4.09457 ./.:.:.:.:.:.:.:. dDocent_Contig_10464 33 . C T 1553.11 . AB=0.276265;ABP=114.752;AC=6;AF=0.5;AN=12;AO=71;CIGAR=1X;DP=257;DPB=257;DPRA=0;EPP=157.185;EPPR=406.904;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.225352;PAIREDR=0.290323;PAO=0;PQA=0;PQR=0;PRO=0;QA=2687;QR=7467;RO=186;RPL=0;RPP=157.185;RPPR=406.904;RPR=71;RUN=1;SAF=71;SAP=157.185;SAR=0;SRF=186;SRP=406.904;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:21,13:21:845:13:449:-30.4903,0,-66.1265 0/1:54:37,17:37:1487:17:647:-42.3046,0,-117.819 0/1:17:14,3:14:555:3:118:-5.88521,0,-45.1708 0/1:63:48,15:48:1931:15:589:-34.3867,0,-155.023 0/1:41:32,9:32:1299:9:344:-18.9757,0,-104.827 0/1:48:34,14:34:1350:14:540:-34.4905,0,-107.314 dDocent_Contig_10465 35 . T C 241.972 . AB=0.173469;ABP=93.769;AC=4;AF=0.333333;AN=12;AO=21;CIGAR=1X;DP=169;DPB=169;DPRA=0;EPP=48.6112;EPPR=324.388;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.871622;PAO=0;PQA=0;PQR=0;PRO=0;QA=802;QR=5549;RO=148;RPL=0;RPP=48.6112;RPPR=324.388;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=148;SRP=324.388;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:28,4:28:1080:4:156:-4.78199,0,-87.8645 0/1:41:37,4:37:1358:4:160:-2.4412,0,-110.148 0/0:41:38,3:38:1395:3:101:0,-2.92574,-116.398 0/0:30:29,1:29:1114:1:41:0,-4.93633,-96.4552 0/1:8:5,3:5:192:3:116:-8.40727,0,-15.2419 0/1:17:11,6:11:410:6:228:-15.763,0,-32.1277 dDocent_Contig_10467 10 . A G 1221.77 . AB=0.322148;ABP=43.9477;AC=6;AF=0.5;AN=12;AO=48;CIGAR=1X3M;DP=149;DPB=149;DPRA=0;EPP=107.241;EPPR=187.585;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.625;PAIREDR=0.941176;PAO=0;PQA=0;PQR=0;PRO=0;QA=1920;QR=3290;RO=85;RPL=0;RPP=107.241;RPPR=187.585;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=85;SRP=187.585;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:24:9,0,0,15:9:343:0,0,15:0,0,588:-46.0305,-48.7398,-76.8728,-48.7398,-76.8728,-76.8728,0,-28.5179,-28.5179,-24.0025 0|1:27:14,3,0,10:14:543:3,0,10:115,0,408:-29.4672,-24.2489,-67.9439,-33.6816,-68.847,-78.2839,0,-35.1759,-44.6134,-41.6031 0|1:29:13,4,3,9:13:507:4,3,9:153,119,365:-26.1962,-17.5599,-58.0223,-20.3139,-49.4303,-61.08,0,-29.1211,-31.877,-38.965 0|1:29:22,0,3,4:22:845:0,3,4:0,118,155:-6.10722,-12.7299,-82.091,-3.02071,-72.3834,-71.4803,0,-69.3575,-59.6497,-68.1534 0|1:16:14,0,0,2:14:539:0,0,2:0,0,81:-2.86925,-7.08367,-51.3143,-7.08367,-51.3143,-51.3143,0,-44.6327,-44.6327,-44.0306 0|1:24:13,2,1,8:13:513:2,1,8:79,40,323:-22.7188,-20.1327,-61.7358,-23.3373,-59.0426,-65.2423,0,-35.7076,-38.9131,-39.8003 dDocent_Contig_10468 98 . N A 1408.75 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=45;CIGAR=1X;DP=45;DPB=45;DPRA=0;EPP=100.727;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1549;QR=0;RO=0;RPL=45;RPP=100.727;RPPR=0;RPR=0;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:20:0,20:0:0:20:687:-62.1516,-6.0206,0 1/1:23:0,23:0:0:23:792:-71.5985,-6.92369,0 dDocent_Contig_10469 61 . G A 172.752 . AB=0.347826;ABP=7.63648;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=103;DPB=103;DPRA=2.47826;EPP=22.5536;EPPR=207.129;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=320;QR=3365;RO=94;RPL=9;RPP=22.5536;RPPR=207.129;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=94;SRP=207.129;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:251:0:0:0,-2.10721,-22.9377 0/1:23:15,8:15:506:8:282:-18.7981,0,-38.9328 0/0:13:13,0:13:484:0:0:0,-3.91339,-43.9032 0/0:34:33,1:33:1218:1:38:0,-6.43775,-106.114 0/0:8:8,0:8:278:0:0:0,-2.40824,-25.357 0/0:18:18,0:18:628:0:0:0,-5.41854,-56.8434 dDocent_Contig_10470 25 . A T 242.024 . AB=0.25;ABP=29.068;AC=3;AF=0.25;AN=12;AO=16;CIGAR=1X;DP=117;DPB=117;DPRA=2.14;EPP=37.7539;EPPR=222.329;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0.633663;PAO=0;PQA=0;PQR=0;PRO=0;QA=597;QR=3988;RO=101;RPL=0;RPP=37.7539;RPPR=222.329;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=101;SRP=222.329;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:11,1:11:445:1:38:-0.184909,0,-36.7933 0/0:10:10,0:10:402:0:0:0,-3.0103,-36.5399 0/1:13:8,5:8:306:5:190:-13.5538,0,-23.9851 0/1:23:17,6:17:682:6:227:-13.8691,0,-54.7852 0/0:34:32,2:32:1266:2:67:0,-3.87249,-107.846 0/0:25:23,2:23:887:2:75:0,-0.405406,-73.0172 dDocent_Contig_10472 19 . C A 45.1589 . AB=0.0944444;ABP=260.161;AC=2;AF=0.166667;AN=12;AO=26;CIGAR=1X;DP=515;DPB=515;DPRA=0.884211;EPP=59.4686;EPPR=1034.46;GTI=0;LEN=1;MEANALT=1.8;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1004;QR=19020;RO=475;RPL=0;RPP=59.4686;RPPR=1034.46;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=475;SRP=1034.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:80:73,7:73:2916:7:276:-1.12349,0,-238.45 0/0:127:118,5:118:4727:5:174:0,-21.4182,-409.305 0/0:95:92,0:92:3689:0:0:0,-27.6948,-331.598 0/1:100:87,10:87:3472:10:392:-6.02925,0,-282.908 0/0:64:59,2:59:2385:2:80:0,-11.1721,-207.196 0/0:49:46,2:46:1831:2:82:0,-7.07922,-157.219 dDocent_Contig_10473 98 . N A 259.116 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=8;CIGAR=2X;DP=8;DPB=8.5;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=1;PQA=34;PQR=0;PRO=0;QA=270;QR=0;RO=0;RPL=8;RPP=20.3821;RPPR=0;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1|1:4:0,4:0:0:4:134:-12.0523,-1.20412,0 .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:68:-6.45788,-0.60206,0 1|1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 dDocent_Contig_10474 58 . T C 35.4765 . AB=0.222222;ABP=9.04217;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=1X;DP=74;DPB=74;DPRA=0.692308;EPP=7.35324;EPPR=159.356;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.763889;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=2908;RO=72;RPL=2;RPP=7.35324;RPPR=159.356;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=72;SRP=159.356;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:362:0:0:0,-2.70927,-32.9437 0/0:21:21,0:21:839:0:0:0,-6.32163,-75.8198 0/0:10:10,0:10:408:0:0:0,-3.0103,-37.0806 0/0:13:13,0:13:529:0:0:0,-3.91339,-47.9563 0/0:12:12,0:12:483:0:0:0,-3.61236,-43.819 0/1:9:7,2:7:287:2:82:-5.07041,0,-23.496 dDocent_Contig_10475 31 . G C 1869.68 . AB=0.127551;ABP=239.169;AC=1;AF=0.0833333;AN=12;AO=26;CIGAR=4M1X8M;DP=374;DPB=302.923;DPRA=0.701205;EPP=59.4686;EPPR=565.422;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1035;QR=10003;RO=259;RPL=0;RPP=59.4686;RPPR=565.422;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=259;SRP=565.422;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:47:18,0,14,15:18:699:0,14,15:0,402,602:-44.2432,-49.6617,-107.113,-17.7613,-75.1895,-70.9751,0,-57.492,-25.5808,-52.9766 0|0:54:21,0,30,1:21:800:0,30,1:0,1003,41:-74.9155,-81.2371,-146.876,0,-65.6986,-56.6677,-77.8505,-143.491,-62.3128,-143.19 0|0:33:14,3,15,1:14:545:3,15,1:122,548,30:-40.5497,-34.6938,-78.595,0,-34.7315,-40.2831,-42.3693,-77.1021,-42.4051,-86.8671 0|0:62:35,0,18,8:35:1354:0,18,8:0,561,321:-34.4812,-45.0173,-156.265,0,-111.232,-105.813,-18.5389,-129.811,-84.7791,-127.402 0|0:83:79,4,0,0:79:3053:4,0,0:162,0,0:0,-10.0185,-259.944,-23.7814,-261.148,-274.507,-23.7814,-261.148,-274.507,-274.507 0|0:95:92,0,0,1:92:3552:0,0,1:0,0,41:0,-27.6948,-319.377,-27.6948,-319.377,-319.377,-24.309,-315.993,-315.993,-315.692 dDocent_Contig_10476 7 . T C 2794.26 . AB=0.233491;ABP=264.591;AC=8;AF=0.666667;AN=12;AO=145;CIGAR=1X;DP=471;DPB=471;DPRA=0;EPP=317.874;EPPR=706.567;GTI=0;LEN=1;MEANALT=1.16667;MQM=32.9172;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5602;QR=12362;RO=324;RPL=0;RPP=317.874;RPPR=706.567;RPR=145;RUN=1;SAF=145;SAP=317.874;SAR=0;SRF=324;SRP=706.567;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:98:80,18:80:3051:18:691:-22.4314,0,-245.248 0/1:130:94,34:94:3601:34:1311:-59.0165,0,-285.453 0/1:77:55,22:55:2098:22:851:-40.6039,0,-165.869 0/1:119:94,25:94:3575:25:968:-36.5822,0,-286.049 1/1:14:1,13:1:37:13:504:-34.0306,-0.516591,0 1/1:33:0,33:0:0:33:1277:-93.9828,-9.93399,0 dDocent_Contig_10477 137 . G A 468.181 . AB=0.444444;ABP=4.21667;AC=1;AF=0.1;AN=10;AO=20;CIGAR=1X1M1X;DP=351;DPB=351;DPRA=0.588235;EPP=46.4397;EPPR=717.425;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=685;QR=11436;RO=329;RPL=0;RPP=46.4397;RPPR=717.425;RPR=20;RUN=1;SAF=0;SAP=46.4397;SAR=20;SRF=0;SRP=717.425;SRR=329;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:75:75,0:75:2648:0:0:0,-22.5772,-238.55 0|0:105:105,0:105:3656:0:0:0,-31.6081,-329.234 0|0:52:52,0:52:1793:0:0:0,-15.6536,-161.642 0|1:45:25,20:25:890:20:685:-48.4201,0,-66.8686 .:.:.:.:.:.:.:. 0|0:74:72,0:72:2449:0:0:0,-21.6742,-220.311 dDocent_Contig_10478 11 . C T 1488.06 . AB=0.10199;ABP=556.142;AC=2;AF=0.166667;AN=12;AO=41;CIGAR=1X12M;DP=402;DPB=417.615;DPRA=0;EPP=92.0407;EPPR=263.587;GTI=0;LEN=1;MEANALT=12.1667;MQM=60;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1639;QR=4674;RO=120;RPL=0;RPP=92.0407;RPPR=263.587;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=120;SRP=263.587;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:63:20,4,1,7,10,8,0,0,8,1:20:778:4,1,7,10,8,0,0,8,1:159,40,241,216,315,0,0,317,41:-20.0851,-13.3276,-76.0771,-22.8242,-74.0005,-86.4743,-7.79956,-58.9769,-68.4711,-69.6446,-12.411,-63.5757,-73.0683,-58.0496,-73.3382,-0.192052,-51.3747,-60.8695,-45.8457,-50.4468,-61.7421,-26.1057,-77.2812,-86.7753,-71.7518,-76.3485,-64.1504,-90.056,-26.1057,-77.2812,-86.7753,-71.7518,-76.3485,-64.1504,-90.056,-90.056,0,-51.1828,-60.6776,-45.6538,-50.2549,-38.0506,-63.9585,-63.9585,-61.5503,-22.7197,-73.8961,-83.3902,-68.3667,-72.9638,-60.765,-86.6709,-86.6709,-60.5732,-86.3699 0|0:73:16,0,3,11,14,5,1,4,10,1:16:636:0,3,11,14,5,1,4,10,1:0,119,433,323,197,39,127,399,41:-30.5788,-35.3952,-87.7752,-25.6379,-78.0195,-77.1164,0,-52.3869,-42.6302,-49.0755,-14.347,-66.7198,-56.9653,-31.3365,-62.5054,-19.2359,-71.6186,-61.8625,-36.2287,-50.5653,-70.1134,-32.1882,-84.5687,-74.8128,-49.18,-63.5137,-68.4119,-84.2676,-25.7342,-78.1147,-68.3589,-42.7262,-57.0623,-61.958,-74.9081,-76.9106,-2.52084,-54.9073,-45.1507,-19.5153,-33.8561,-38.7492,-51.7005,-45.2466,-51.897,-32.0097,-84.3902,-74.6344,-49.0015,-63.3351,-68.2334,-81.1836,-74.7297,-51.522,-84.0891 0|0:84:26,1,0,12,21,3,2,4,4,0:26:1027:1,0,12,21,3,2,4,4,0:40,0,470,462,120,80,136,158,0:-29.778,-34.3919,-118.629,-37.6047,-118.93,-122.142,0,-81.3367,-84.549,-80.9366,-8.06834,-89.3763,-92.5879,-55.0028,-86.2662,-27.7601,-109.088,-112.3,-74.7062,-82.7474,-111.397,-31.0112,-112.338,-115.55,-77.9567,-85.9971,-105.708,-114.948,-27.6519,-108.978,-112.191,-74.5974,-82.6401,-102.348,-105.599,-110.986,-24.5981,-105.927,-109.139,-71.5449,-79.5869,-99.2966,-102.547,-99.1874,-107.935,-37.6047,-118.93,-122.142,-84.549,-92.5879,-112.3,-115.55,-112.191,-109.139,-122.142 0|1:78:26,1,4,6,8,8,1,4,9,3:26:1025:1,4,6,8,8,1,4,9,3:40,160,240,187,319,40,136,362,114:-22.016,-26.6306,-110.676,-16.7194,-97.8554,-99.8631,-10.6254,-91.7623,-81.8526,-93.1679,-17.403,-98.5291,-88.6203,-82.5277,-99.3323,-3.56321,-84.7019,-74.7921,-68.6988,-75.4677,-85.5055,-26.5467,-107.681,-97.7716,-91.6785,-98.4453,-84.6181,-110.592,-19.8937,-101.027,-91.1177,-85.0247,-91.7925,-77.9643,-100.943,-103.035,0,-81.1397,-71.2298,-65.1365,-71.9058,-58.0757,-81.0559,-74.4022,-81.6423,-20.493,-101.628,-91.7185,-85.6254,-92.3928,-78.5649,-101.544,-94.8904,-75.0027,-103.937 0|0:45:10,0,0,5,5,5,0,5,4,9:10:376:0,0,5,5,5,0,5,4,9:0,0,198,114,200,0,147,160,339:-24.7731,-27.7834,-58.5923,-27.7834,-58.5923,-58.5923,-11.6826,-42.4948,-42.4948,-40.9897,-20.4001,-51.2043,-51.2043,-35.1086,-49.6991,-11.4364,-42.2488,-42.2488,-26.1496,-34.8625,-40.7437,-27.7834,-58.5923,-58.5923,-42.4948,-51.2043,-42.2488,-58.5923,-16.5236,-47.3314,-47.3314,-31.2342,-39.9471,-30.9881,-47.3314,-45.8262,-14.5952,-45.4069,-45.4069,-29.3081,-38.0202,-29.062,-45.4069,-34.1461,-44.2028,0,-30.8148,-30.8148,-14.7144,-23.4309,-14.4682,-30.8148,-19.5549,-17.627,-28.1055 0|0:59:22,0,0,3,5,0,3,1,6,12:22:832:0,0,3,5,0,3,1,6,12:0,0,120,152,0,116,37,243,478:-32.7526,-39.3753,-107.57,-39.3753,-107.57,-107.57,-29.5652,-97.7609,-97.7609,-96.8578,-28.1792,-96.3688,-96.3688,-86.5603,-94.8636,-39.3753,-107.57,-107.57,-97.7609,-96.3688,-107.57,-29.846,-98.0414,-98.0414,-88.2325,-86.8409,-98.0414,-97.1383,-36.6179,-104.812,-104.812,-95.0034,-93.6114,-104.812,-95.2838,-104.511,-19.3303,-87.5284,-87.5284,-77.7193,-76.3281,-87.5284,-77.9998,-84.7708,-85.7223,0,-68.2031,-68.2031,-58.3935,-57.0036,-68.2031,-58.6741,-65.4455,-48.1597,-64.5908 dDocent_Contig_10480 11 . C A 168.678 . AB=0.0973684;ABP=538.084;AC=3;AF=0.25;AN=12;AO=37;CIGAR=1X;DP=696;DPB=696;DPRA=1.20253;EPP=83.3548;EPPR=1434.01;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992413;PAO=0;PQA=0;PQR=0;PRO=0;QA=1489;QR=26471;RO=659;RPL=0;RPP=83.3548;RPPR=1434.01;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=659;SRP=1434.01;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:57:57,0:57:2267:0:0:0,-17.1587,-204.194 0/0:102:102,0:102:4075:0:0:0,-30.7051,-366.722 0/0:157:157,0:157:6307:0:0:0,-47.2617,-567.354 0/1:106:95,11:95:3841:11:439:-7.95459,0,-313.767 0/1:142:127,15:127:5125:15:606:-12.1324,0,-418.345 0/1:132:121,11:121:4856:11:444:-0.579348,0,-397.196 dDocent_Contig_10481 119 . T G 119.061 . AB=0.205128;ABP=32.4644;AC=2;AF=0.2;AN=10;AO=8;CIGAR=1X1M4I2M1I1X;DP=100;DPB=108;DPRA=0.959016;EPP=20.3821;EPPR=187.585;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=5;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=287;QR=2685;RO=85;RPL=0;RPP=20.3821;RPPR=187.585;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=0;SRP=187.585;SRR=85;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:7:7,0,0:7:203:0,0:0,0:0,-2.10721,-18.5566,-2.10721,-18.5566,-18.5566 0|0:25:23,0,0:23:744:0,0:0,0:0,-6.92369,-67.1758,-6.92369,-67.1758,-67.1758 0|0:29:26,0,2:26:826:0,2:0,14:0,-7.82678,-74.4593,-7.35542,-73.8186,-73.2165 0|1:31:23,6,2:23:729:6,2:220,22:-11.2516,0,-57.0547,-16.8614,-57.4995,-74.8906 .:.:.:.:.:.:.:. 0|1:8:6,2,0:6:183:2,0:67,0:-3.9546,0,-14.3637,-5.76078,-14.9657,-20.3991 dDocent_Contig_10482 155 . T A 304.486 . AB=0.317073;ABP=14.9269;AC=2;AF=0.25;AN=8;AO=14;CIGAR=1X;DP=78;DPB=78;DPRA=1.29167;EPP=33.4109;EPPR=141.985;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=513;QR=2423;RO=64;RPL=0;RPP=33.4109;RPPR=141.985;RPR=14;RUN=1;SAF=0;SAP=33.4109;SAR=14;SRF=0;SRP=141.985;SRR=64;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:609:0:0:0,-4.81648,-55.1427 0/1:12:10,2:10:350:2:78:-3.79094,0,-28.2133 0/0:21:20,1:20:768:1:8:0,-5.52163,-68.6424 0/1:29:18,11:18:696:11:427:-30.0538,0,-54.2363 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10483 1 . N G 110.034 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=118;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:118:-11.0029,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10484 25 . A G 17631.8 . AB=0.143657;ABP=594.186;AC=2;AF=0.166667;AN=12;AO=77;CIGAR=6M1X1M1X2M10I15M;DP=860;DPB=1434.12;DPRA=0;EPP=170.214;EPPR=163.699;GTI=0;LEN=1;MEANALT=9.5;MQM=60;MQMR=60;NS=6;NUMALT=7;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2986;QR=2902;RO=74;RPL=0;RPP=170.214;RPPR=163.699;RPR=77;RUN=1;SAF=77;SAP=170.214;SAR=0;SRF=74;SRP=163.699;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:46:13,2,1,0,2,25,0,3:13:506:2,1,0,2,25,0,3:67,40,0,69,853,0,105:-65.289,-63.7777,-104.774,-65.9055,-102.08,-107.203,-69.2024,-105.376,-107.504,-110.8,-63.5965,-99.771,-101.899,-105.195,-104.593,0,-36.1876,-38.3122,-41.6086,-36.006,-34.0828,-69.2024,-105.376,-107.504,-110.8,-105.195,-41.6086,-110.8,-60.6587,-96.8337,-98.9617,-102.258,-96.6527,-33.0697,-102.258,-101.355 0|0:104:8,5,3,28,0,52,1,0:8:313:5,3,28,0,52,1,0:186,117,922,0,1782,19,0:-191.011,-178.193,-202.428,-183.8,-194.314,-208.637,-118.908,-129.423,-135.03,-136.22,-193.419,-203.933,-209.54,-144.649,-219.159,-48.7596,-59.2771,-64.8844,0,-74.5051,-58.8515,-192.012,-202.526,-208.133,-143.242,-217.752,-73.099,-217.451,-193.419,-203.933,-209.54,-144.649,-219.159,-74.5051,-217.752,-219.159 0|0:196:29,7,0,16,0,123,17,0:29:1134:7,0,16,0,123,17,0:228,0,552,0,4211,540,0:-333.065,-323.392,-414.526,-341.795,-416.634,-435.036,-296.957,-371.797,-390.199,-385.383,-341.795,-416.634,-435.036,-390.199,-435.036,0,-74.8605,-93.2611,-48.4252,-93.2611,-56.2344,-298.333,-373.172,-391.574,-346.738,-391.574,-49.8061,-386.457,-341.795,-416.634,-435.036,-390.199,-435.036,-93.2611,-391.574,-435.036 0|0:128:24,3,0,0,0,96,3,0:24:949:3,0,0,0,96,3,0:93,0,0,0,3189,102,0:-250.769,-250.53,-327.738,-257.994,-328.641,-336.106,-257.994,-328.641,-336.106,-336.106,-257.994,-328.641,-336.106,-336.106,-336.106,0,-70.7024,-78.1608,-78.1608,-78.1608,-49.2619,-249.72,-320.368,-327.832,-327.832,-327.832,-69.8909,-326.929,-257.994,-328.641,-336.106,-336.106,-336.106,-78.1608,-327.832,-336.106 1|0:135:0,0,33,76,0,16,0,0:0:0:0,33,76,0,16,0,0:0,1276,2559,0,535,0,0:-312.162,-312.162,-312.162,-207.344,-207.344,-197.41,-104.845,-104.845,0,-81.9663,-312.162,-312.162,-207.344,-104.845,-312.162,-268.846,-268.846,-164.026,-61.5351,-268.846,-264.03,-312.162,-312.162,-207.344,-104.845,-312.162,-268.846,-312.162,-312.162,-312.162,-207.344,-104.845,-312.162,-268.846,-312.162,-312.162 1|0:251:0,0,40,177,0,13,3,1:0:0:0,40,177,0,13,3,1:0,1553,6089,0,410,105,31:-622.109,-622.109,-622.109,-494.5,-494.5,-482.459,-127.644,-127.644,0,-74.3616,-622.109,-622.109,-494.5,-127.644,-622.109,-589.139,-589.139,-461.529,-94.6792,-589.139,-585.225,-613.688,-613.688,-486.078,-119.222,-613.688,-580.717,-612.785,-619.621,-619.621,-492.012,-125.156,-619.621,-586.65,-611.199,-619.32 dDocent_Contig_10485 14 . T A 69.9707 . AB=0.133333;ABP=55.5599;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=205;DPB=205;DPRA=1.40625;EPP=16.0391;EPPR=435.133;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.79397;PAO=0;PQA=0;PQR=0;PRO=0;QA=241;QR=7986;RO=199;RPL=0;RPP=16.0391;RPPR=435.133;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=199;SRP=435.133;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:567:0:0:0,-4.21442,-51.3729 0/0:25:25,0:25:1018:0:0:0,-7.52575,-91.9109 0/0:44:44,0:44:1757:0:0:0,-13.2453,-158.345 0/0:47:47,0:47:1870:0:0:0,-14.1484,-168.503 0/0:30:30,0:30:1205:0:0:0,-9.0309,-108.722 0/1:45:39,6:39:1569:6:241:-8.51995,0,-127.896 dDocent_Contig_10487 28 . G A 12365.9 . AB=0.687764;ABP=75.5851;AC=8;AF=0.666667;AN=12;AO=365;CIGAR=1X;DP=440;DPB=440;DPRA=0;EPP=795.598;EPPR=165.871;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=14649;QR=3017;RO=75;RPL=0;RPP=795.598;RPPR=165.871;RPR=365;RUN=1;SAF=365;SAP=795.598;SAR=0;SRF=75;SRP=165.871;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:57:0,57:0:0:57:2281:-205.448,-17.1587,0 0/1:80:21,59:21:850:59:2370:-189.363,0,-52.7281 0/1:34:12,22:12:472:22:887:-69.9027,0,-32.5926 0/1:50:24,26:24:968:26:1037:-78.5671,0,-72.3659 1/1:146:1,145:1:41:145:5816:-519.129,-39.8558,0 0/1:73:17,56:17:686:56:2258:-181.399,0,-40.0948 dDocent_Contig_10488 80 . G A 67.9382 . AB=0.375;ABP=4.09604;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=64;DPB=64;DPRA=1.45946;EPP=11.6962;EPPR=133.299;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.966667;PAO=0;PQA=0;PQR=0;PRO=0;QA=154;QR=2295;RO=60;RPL=4;RPP=11.6962;RPPR=133.299;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=60;SRP=133.299;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:380:0:0:0,-3.0103,-34.5537 0/0:5:5,0:5:192:0:0:0,-1.50515,-17.6498 0/0:19:18,1:18:693:1:39:0,-1.82301,-58.8074 0/1:8:5,3:5:195:3:115:-8.31665,0,-15.516 0/0:7:7,0:7:270:0:0:0,-2.10721,-24.6653 0/0:15:15,0:15:565:0:0:0,-4.51545,-51.1884 dDocent_Contig_10489 47 . G T 329.507 . AB=0.258621;ABP=32.3626;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=150;DPB=150;DPRA=1.05479;EPP=37.7539;EPPR=293.988;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8125;PAIREDR=0.544776;PAO=0;PQA=0;PQR=0;PRO=0;QA=629;QR=5321;RO=134;RPL=0;RPP=37.7539;RPPR=293.988;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=134;SRP=293.988;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:4:4,0:4:164:0:0:0,-1.20412,-15.1499 0/1:21:16,5:16:631:5:186:-10.7723,0,-50.8026 0/0:19:18,1:18:704:1:41:0,-1.625,-59.587 0/1:37:27,10:27:1072:10:402:-25.4002,0,-85.6347 0/0:29:29,0:29:1150:0:0:0,-8.72987,-103.783 0/0:40:40,0:40:1600:0:0:0,-12.0412,-144.232 dDocent_Contig_10490 78 . A G 296.396 . AB=0.481481;ABP=3.09072;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=68;DPB=68;DPRA=3.29268;EPP=31.2394;EPPR=122.441;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.923077;PAIREDR=0.927273;PAO=0;PQA=0;PQR=0;PRO=0;QA=433;QR=1950;RO=55;RPL=13;RPP=31.2394;RPPR=122.441;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=55;SRP=122.441;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:249:0:0:0,-2.10721,-22.7555 0/1:27:14,13:14:484:13:433:-31.1624,0,-35.7596 0/0:8:8,0:8:284:0:0:0,-2.40824,-25.9033 0/0:13:13,0:13:468:0:0:0,-3.91339,-42.4594 0/0:9:9,0:9:325:0:0:0,-2.70927,-29.5964 0/0:4:4,0:4:140:0:0:0,-1.20412,-12.9446 dDocent_Contig_10491 143 . A T 250.519 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=1X;DP=45;DPB=45;DPRA=0.921053;EPP=18.2106;EPPR=85.5263;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=269;QR=1466;RO=38;RPL=0;RPP=18.2106;RPPR=85.5263;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=85.5263;SRR=38;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:467:0:0:0,-3.61236,-42.3824 0/0:7:7,0:7:272:0:0:0,-2.10721,-24.8472 0/0:9:9,0:9:343:0:0:0,-2.70927,-31.2261 0/0:8:8,0:8:311:0:0:0,-2.40824,-28.3543 0/0:2:2,0:2:73:0:0:0,-0.60206,-6.9313 1/1:7:0,7:0:0:7:269:-24.5746,-2.10721,0 dDocent_Contig_10492 18 . T C 1707.51 . AB=0.360215;ABP=34.5784;AC=5;AF=0.416667;AN=12;AO=68;CIGAR=1X;DP=227;DPB=227;DPRA=0;EPP=150.67;EPPR=348.274;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.955882;PAIREDR=0.886792;PAO=0;PQA=0;PQR=0;PRO=0;QA=2644;QR=6332;RO=159;RPL=0;RPP=150.67;RPPR=348.274;RPR=68;RUN=1;SAF=68;SAP=150.67;SAR=0;SRF=159;SRP=348.274;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:40,1:40:1584:1:41:0,-8.24766,-138.701 0/1:27:22,5:22:881:5:194:-9.70308,0,-71.4705 0/1:34:23,11:23:918:11:416:-27.5438,0,-72.6892 0/1:38:33,5:33:1335:5:193:-6.29958,0,-108.969 0/1:42:22,20:22:867:20:788:-58.5952,0,-65.6959 0/1:45:19,26:19:747:26:1012:-77.8309,0,-54.0029 dDocent_Contig_10493 11 . A G 554.437 . AB=0.642857;ABP=7.97367;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=237;DPB=237;DPRA=0.669856;EPP=42.0968;EPPR=478.563;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=723;QR=8752;RO=219;RPL=0;RPP=42.0968;RPPR=478.563;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=219;SRP=478.563;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:845:0:0:0,-6.32163,-76.3617 0/0:43:43,0:43:1712:0:0:0,-12.9443,-154.301 0/0:37:37,0:37:1486:0:0:0,-11.1381,-133.982 0/0:42:42,0:42:1669:0:0:0,-12.6433,-150.44 0/1:28:10,18:10:399:18:723:-56.9665,0,-27.8362 0/0:66:66,0:66:2641:0:0:0,-19.868,-237.815 dDocent_Contig_10494 16 . T C 1681.84 . AB=0.646341;ABP=18.2636;AC=1;AF=0.1;AN=10;AO=53;CIGAR=1X;DP=275;DPB=275;DPRA=1.69948;EPP=118.098;EPPR=485.077;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2159;QR=8888;RO=222;RPL=0;RPP=118.098;RPPR=485.077;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=222;SRP=485.077;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:47:47,0:47:1894:0:0:0,-14.1484,-170.655 0/0:44:44,0:44:1776:0:0:0,-13.2453,-160.047 0/0:41:41,0:41:1625:0:0:0,-12.3422,-146.476 0/0:61:61,0:61:2420:0:0:0,-18.3628,-217.943 ./.:.:.:.:.:.:.:. 0/1:82:29,53:29:1173:53:2159:-169.786,0,-81.1604 dDocent_Contig_10497 107 . N T 64.5902 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=68;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10498 10 . T G 1323.31 . AB=0.108696;ABP=64.1892;AC=0;AF=0;AN=12;AO=5;CIGAR=2M1X16M;DP=259;DPB=267.211;DPRA=0;EPP=13.8677;EPPR=235.358;GTI=0;LEN=1;MEANALT=7;MQM=60;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=1;PAIREDR=0.747664;PAO=0;PQA=0;PQR=0;PRO=0;QA=191;QR=4071;RO=107;RPL=0;RPP=13.8677;RPPR=235.358;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=107;SRP=235.358;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:46:17,1,0,0,8,2,0,7,3,5:17:649:1,0,0,8,2,0,7,3,5:38,0,0,310,78,0,280,100,191:-20.3519,-22.3531,-75.2977,-25.4694,-75.5987,-78.7151,-25.4694,-75.5987,-78.7151,-78.7151,0,-50.1296,-53.2461,-53.2461,-50.8379,-19.0573,-69.1866,-72.3031,-72.3031,-46.8339,-71.701,-25.4694,-75.5987,-78.7151,-78.7151,-53.2461,-72.3031,-78.7151,-2.39943,-52.5307,-55.6472,-55.6472,-30.1771,-49.2349,-55.6472,-53.54,-17.383,-67.51,-70.6264,-70.6264,-45.158,-64.2145,-70.6264,-47.5588,-69.7233,-9.79809,-59.9271,-63.0435,-63.0435,-37.5743,-56.6314,-63.0435,-39.9751,-54.9552,-61.5383 0|0:26:8,0,1,0,6,10,0,0,0,0:8:301:0,1,0,6,10,0,0,0,0:0,39,0,233,385,0,0,0,0:-29.2228,-31.631,-56.2933,-28.4239,-53.0866,-52.7856,-31.631,-56.2933,-53.0866,-56.2933,-12.4757,-37.1423,-33.9352,-37.1423,-35.3361,0,-24.6733,-21.4656,-24.6733,-5.51226,-21.663,-31.631,-56.2933,-53.0866,-56.2933,-37.1423,-24.6733,-56.2933,-31.631,-56.2933,-53.0866,-56.2933,-37.1423,-24.6733,-56.2933,-56.2933,-31.631,-56.2933,-53.0866,-56.2933,-37.1423,-24.6733,-56.2933,-56.2933,-56.2933,-31.631,-56.2933,-53.0866,-56.2933,-37.1423,-24.6733,-56.2933,-56.2933,-56.2933,-56.2933 0|0:45:9,3,0,0,11,6,3,2,6,0:9:340:3,0,0,11,6,3,2,6,0:123,0,0,418,234,117,82,205,0:-31.5778,-24.1303,-51.099,-34.287,-52.0021,-62.1576,-34.287,-52.0021,-62.1576,-62.1576,0,-17.7167,-27.8739,-27.8739,-24.5626,-15.0459,-32.7619,-42.9183,-42.9183,-8.63196,-41.1121,-24.6667,-42.3822,-52.5381,-52.5381,-18.2532,-33.2982,-51.635,-27.516,-45.2314,-55.3873,-55.3873,-21.1026,-36.1475,-45.7675,-54.7852,-17.6553,-35.3697,-45.5255,-45.5255,-11.2421,-26.2861,-35.906,-38.7551,-43.7193,-34.287,-52.0021,-62.1576,-62.1576,-27.8739,-42.9183,-52.5381,-55.3873,-45.5255,-62.1576 0|0:39:22,0,0,4,9,0,1,0,0,0:22:847:0,0,4,9,0,1,0,0,0:0,0,151,347,0,39,0,0,0:-21.9134,-28.536,-98.0984,-28.536,-98.0984,-98.0984,-16.1509,-85.7211,-85.7211,-84.517,0,-69.5987,-69.5987,-57.2204,-66.8895,-28.536,-98.0984,-98.0984,-85.7211,-69.5987,-98.0984,-25.3276,-94.892,-94.892,-82.5146,-66.392,-94.892,-94.5909,-28.536,-98.0984,-98.0984,-85.7211,-69.5987,-98.0984,-94.892,-98.0984,-28.536,-98.0984,-98.0984,-85.7211,-69.5987,-98.0984,-94.892,-98.0984,-98.0984,-28.536,-98.0984,-98.0984,-85.7211,-69.5987,-98.0984,-94.892,-98.0984,-98.0984,-98.0984 0|0:53:30,0,7,0,3,8,0,0,0,0:30:1146:0,7,0,3,8,0,0,0,0:0,267,0,117,303,0,0,0,0:-15.8234,-24.8543,-118.892,-2.93798,-96.9853,-94.878,-24.8543,-118.892,-96.9853,-118.892,-15.2314,-109.273,-87.3661,-109.273,-108.37,0,-94.0486,-72.1416,-94.0486,-84.4294,-91.6404,-24.8543,-118.892,-96.9853,-118.892,-109.273,-94.0486,-118.892,-24.8543,-118.892,-96.9853,-118.892,-109.273,-94.0486,-118.892,-118.892,-24.8543,-118.892,-96.9853,-118.892,-109.273,-94.0486,-118.892,-118.892,-118.892,-24.8543,-118.892,-96.9853,-118.892,-109.273,-94.0486,-118.892,-118.892,-118.892,-118.892 0|0:50:21,0,10,0,8,7,1,2,1,0:21:788:0,10,0,8,7,1,2,1,0:0,378,0,300,269,36,80,38,0:-24.6628,-30.9845,-95.5287,0,-64.5434,-61.5331,-30.9845,-95.5287,-64.5434,-95.5287,-6.41382,-70.9568,-39.9716,-70.9568,-68.5486,-8.89967,-73.4444,-42.4587,-73.4444,-48.8723,-71.3371,-28.0477,-92.5917,-61.6064,-92.5917,-68.0199,-70.5073,-92.2906,-24.3928,-88.9376,-57.952,-88.9376,-64.3656,-66.8531,-86.0006,-88.3356,-27.8679,-92.4122,-61.4268,-92.4122,-67.8403,-70.3278,-89.4751,-85.8211,-92.1111,-30.9845,-95.5287,-64.5434,-95.5287,-70.9568,-73.4444,-92.5917,-88.9376,-92.4122,-95.5287 dDocent_Contig_10499 62 . G C 323.123 . AB=0.309524;ABP=16.2459;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=363;DPB=363;DPRA=0.261682;EPP=31.2394;EPPR=763.026;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=527;QR=13819;RO=350;RPL=13;RPP=31.2394;RPPR=763.026;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=350;SRP=763.026;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:84:84,0:84:3348:0:0:0,-25.2865,-301.371 0/0:79:79,0:79:3066:0:0:0,-23.7814,-276.031 0/0:82:82,0:82:3274:0:0:0,-24.6845,-294.716 0/0:76:76,0:76:2978:0:0:0,-22.8783,-268.113 0/1:33:22,11:22:871:11:447:-30.6515,0,-68.7653 0/1:9:7,2:7:282:2:80:-4.88252,0,-23.0437 dDocent_Contig_10502 1 . N G 91.3891 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=98;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:98:-9.13836,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10503 29 . C A 111.753 . AB=0.144737;ABP=86.3263;AC=3;AF=0.25;AN=12;AO=11;CIGAR=1X2M2X;DP=157;DPB=157;DPRA=0.938272;EPP=26.8965;EPPR=313.531;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.685315;PAO=0;PQA=0;PQR=0;PRO=0;QA=405;QR=5506;RO=143;RPL=0;RPP=26.8965;RPPR=313.531;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=143;SRP=313.531;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:34:34,0:34:1326:0:0:0,-10.235,-119.615 0|1:33:30,3:30:1177:3:109:-0.234012,0,-96.2833 0|1:25:20,5:20:730:5:185:-9.48426,0,-58.4819 0|1:18:14,3:14:531:3:111:-4.91151,0,-42.6943 0|0:22:21,0:21:806:0:0:0,-6.32163,-72.7653 0|0:25:24,0:24:936:0:0:0,-7.22472,-84.3477 dDocent_Contig_10504 52 . T A 397.395 . AB=0.195122;ABP=102.315;AC=4;AF=0.333333;AN=12;AO=24;CIGAR=1X;DP=187;DPB=187;DPRA=0.960938;EPP=55.1256;EPPR=356.96;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.166667;PAIREDR=0.558282;PAO=0;PQA=0;PQR=0;PRO=0;QA=917;QR=6429;RO=163;RPL=24;RPP=55.1256;RPPR=331.382;RPR=0;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=160;SRP=331.382;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:20,4:20:763:4:162:-7.74203,0,-61.7508 0/1:46:41,5:41:1628:5:190:-3.61666,0,-132.901 0/1:31:24,7:24:965:7:250:-13.5082,0,-77.8179 0/0:48:48,0:48:1900:0:0:0,-14.4494,-171.204 0/0:16:16,0:16:640:0:0:0,-4.81648,-57.9357 0/1:22:14,8:14:533:8:315:-22.0927,0,-41.6744 dDocent_Contig_10505 108 . C T 87.0312 . AB=0;ABP=0;AC=2;AF=0.2;AN=10;AO=12;CIGAR=1X;DP=90;DPB=90;DPRA=1.15625;EPP=29.068;EPPR=170.214;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=210;QR=1279;RO=77;RPL=0;RPP=29.068;RPPR=170.214;RPR=12;RUN=1;SAF=0;SAP=29.068;SAR=12;SRF=0;SRP=170.214;SRR=77;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:5,2:5:80:2:20:0,-0.207223,-5.45984 0/0:30:27,3:27:447:3:45:0,-4.83218,-36.1954 0/0:16:15,0:15:238:0:0:0,-4.51545,-21.5214 0/0:34:30,4:30:514:4:56:0,-5.05554,-41.2503 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:89:-8.30453,-0.90309,0 dDocent_Contig_10506 14 . A C 168.393 . AB=0.142857;ABP=103.829;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X;DP=300;DPB=300;DPRA=1.80769;EPP=50.7827;EPPR=606.68;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.902878;PAO=0;PQA=0;PQR=0;PRO=0;QA=880;QR=11083;RO=278;RPL=0;RPP=50.7827;RPPR=606.68;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=278;SRP=606.68;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:46:38,8:38:1509:8:320:-15.3207,0,-122.206 0/0:76:71,5:71:2851:5:200:0,-4.49857,-238.31 0/1:45:40,5:40:1603:5:199:-4.7404,0,-130.951 0/0:68:64,4:64:2544:4:161:0,-5.59476,-214.225 0/0:24:24,0:24:964:0:0:0,-7.22472,-87.06 0/0:41:41,0:41:1612:0:0:0,-12.3422,-145.315 dDocent_Contig_10507 27 . T G 650.452 . AB=0.238095;ABP=78.0812;AC=4;AF=0.333333;AN=12;AO=32;CIGAR=1X;DP=164;DPB=164;DPRA=0;EPP=72.4974;EPPR=289.645;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.46875;PAIREDR=0.651515;PAO=0;PQA=0;PQR=0;PRO=0;QA=1290;QR=5299;RO=132;RPL=0;RPP=72.4974;RPPR=289.645;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=132;SRP=289.645;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:26,4:26:1029:4:162:-5.93606,0,-83.8732 0/1:26:19,7:19:770:7:274:-17.1968,0,-61.7922 0/1:28:22,6:22:868:6:245:-14.0006,0,-69.9991 0/1:42:29,13:29:1169:13:527:-35.1335,0,-92.8443 0/0:19:18,1:18:732:1:41:0,-1.625,-62.1096 0/0:19:18,1:18:731:1:41:0,-1.625,-62.0193 dDocent_Contig_10508 119 . C T 433.574 . AB=0.351852;ABP=13.3047;AC=5;AF=0.416667;AN=12;AO=20;CIGAR=1X;DP=81;DPB=81;DPRA=1.05769;EPP=46.4397;EPPR=135.47;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=705;QR=2081;RO=61;RPL=0;RPP=46.4397;RPPR=135.47;RPR=20;RUN=1;SAF=0;SAP=46.4397;SAR=20;SRF=0;SRP=135.47;SRR=61;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:21,7:21:714:7:240:-13.5055,0,-56.1474 0/1:17:7,10:7:244:10:359:-27.5361,0,-17.1825 0/0:23:23,0:23:797:0:0:0,-6.92369,-72.0491 0/1:9:7,2:7:222:2:70:-3.93806,0,-17.5816 1/1:1:0,1:0:0:1:36:-3.59827,-0.30103,0 0/0:3:3,0:3:104:0:0:0,-0.90309,-9.70309 dDocent_Contig_10509 7 . T G 52.0006 . AB=0.136364;ABP=104.082;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=328;DPB=328;DPRA=0.562791;EPP=37.7539;EPPR=680.51;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=534;QR=11806;RO=312;RPL=0;RPP=37.7539;RPPR=680.51;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=312;SRP=680.51;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:23,1:23:794:1:37:0,-3.52689,-68.0535 0/0:70:69,1:69:2642:1:39:0,-17.1755,-234.073 0/0:86:86,0:86:3309:0:0:0,-25.8886,-297.951 0/0:60:58,2:58:2197:2:77:0,-10.7527,-190.641 0/1:32:26,6:26:991:6:165:-5.48233,0,-79.867 0/1:56:50,6:50:1873:6:216:-2.93115,0,-151.95 dDocent_Contig_10510 58 . A G 501.073 . AB=0.338983;ABP=16.2968;AC=2;AF=0.2;AN=10;AO=20;CIGAR=1X;DP=133;DPB=133;DPRA=1.19595;EPP=46.4397;EPPR=248.387;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0.95;PAIREDR=0.99115;PAO=0;PQA=0;PQR=0;PRO=0;QA=783;QR=4462;RO=113;RPL=20;RPP=46.4397;RPPR=248.387;RPR=0;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=113;SRP=248.387;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:37,0:37:1467:0:0:0,-11.1381,-132.278 0/0:35:35,0:35:1391:0:0:0,-10.536,-125.449 0/1:26:20,6:20:780:6:228:-13.051,0,-62.6912 0/1:33:19,14:19:742:14:555:-40.3571,0,-57.1653 ./.:.:.:.:.:.:.:. 0/0:2:2,0:2:82:0:0:0,-0.60206,-7.77968 dDocent_Contig_10511 7 . T A 1242.27 . AB=0.26484;ABP=108.203;AC=5;AF=0.416667;AN=12;AO=58;CIGAR=1X;DP=238;DPB=238;DPRA=2.30526;EPP=128.956;EPPR=393.875;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.396552;PAIREDR=0.377778;PAO=0;PQA=0;PQR=0;PRO=0;QA=2196;QR=6808;RO=180;RPL=0;RPP=128.956;RPPR=393.875;RPR=58;RUN=1;SAF=58;SAP=128.956;SAR=0;SRF=180;SRP=393.875;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:44:31,13:31:1176:13:490:-31.1981,0,-92.892 0/1:58:42,16:42:1579:16:622:-38.8603,0,-124.919 0/0:19:19,0:19:727:0:0:0,-5.71957,-65.7612 0/1:43:37,6:37:1418:6:220:-7.20772,0,-114.956 0/1:46:31,15:31:1138:15:554:-36.3474,0,-88.8636 0/1:28:20,8:20:770:8:310:-19.8349,0,-61.1973 dDocent_Contig_10512 62 . T G 3404.65 . AB=0.707006;ABP=61.4464;AC=3;AF=0.25;AN=12;AO=111;CIGAR=1X;DP=327;DPB=327;DPRA=0.923529;EPP=244.044;EPPR=472.048;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4358;QR=8553;RO=216;RPL=111;RPP=244.044;RPPR=472.048;RPR=0;RUN=1;SAF=111;SAP=244.044;SAR=0;SRF=216;SRP=472.048;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1132:0:0:0,-8.42884,-102.161 0/1:66:18,48:18:676:48:1895:-150.872,0,-41.2908 0/1:35:9,26:9:362:26:994:-79.2126,0,-22.407 0/1:56:19,37:19:753:37:1469:-115.602,0,-51.2347 0/0:39:39,0:39:1556:0:0:0,-11.7402,-140.277 0/0:103:103,0:103:4074:0:0:0,-31.0061,-366.65 dDocent_Contig_10513 16 . T G 323.515 . AB=0.188119;ABP=88.3427;AC=3;AF=0.25;AN=12;AO=22;CIGAR=1X;DP=239;DPB=239;DPRA=0.737255;EPP=50.7827;EPPR=474.22;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.636364;PAIREDR=0.576037;PAO=0;PQA=0;PQR=0;PRO=0;QA=863;QR=8611;RO=217;RPL=0;RPP=50.7827;RPPR=474.22;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=217;SRP=474.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:45:39,6:39:1569:6:240:-8.4293,0,-127.898 0/0:38:36,2:36:1406:2:80:0,-3.84735,-119.204 0/1:23:14,9:14:565:9:346:-24.57,0,-44.2696 0/1:33:29,4:29:1169:4:157:-4.5739,0,-95.5555 0/0:51:51,0:51:2007:0:0:0,-15.3525,-180.831 0/0:49:48,1:48:1895:1:40:0,-10.7548,-166.759 dDocent_Contig_10514 81 . G A 424.226 . AB=0.208333;ABP=109.412;AC=5;AF=0.416667;AN=12;AO=32;CIGAR=1X;DP=171;DPB=171;DPRA=0;EPP=72.4974;EPPR=304.845;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.96875;PAIREDR=0.985612;PAO=0;PQA=0;PQR=0;PRO=0;QA=1107;QR=4790;RO=139;RPL=32;RPP=72.4974;RPPR=304.845;RPR=0;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=139;SRP=304.845;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:15,11:15:517:11:366:-25.4323,0,-39.0296 0/1:38:30,8:30:1040:8:279:-14.0093,0,-82.4682 0/1:25:21,4:21:719:4:142:-5.60346,0,-57.4994 0/1:36:32,4:32:1092:4:141:-2.19995,0,-87.7419 0/0:27:25,2:25:875:2:71:0,-1.38575,-72.3232 0/1:19:16,3:16:547:3:108:-4.3556,0,-43.8306 dDocent_Contig_10515 63 . A T 288.878 . AB=0.34375;ABP=9.79615;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=134;DPB=134;DPRA=1.56863;EPP=26.8965;EPPR=270.101;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=441;QR=4867;RO=123;RPL=11;RPP=26.8965;RPPR=270.101;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=123;SRP=270.101;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:404:0:0:0,-3.0103,-36.7201 0/0:6:6,0:6:230:0:0:0,-1.80618,-21.0653 0/0:3:3,0:3:121:0:0:0,-0.90309,-11.28 0/0:35:35,0:35:1383:0:0:0,-10.536,-124.734 0/1:32:21,11:21:815:11:441:-30.4106,0,-64.0311 0/0:48:48,0:48:1914:0:0:0,-14.4494,-172.464 dDocent_Contig_10517 12 . G T 143.979 . AB=0.181818;ABP=41.702;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=201;DPB=201;DPRA=1.40127;EPP=20.3821;EPPR=422.104;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=320;QR=7701;RO=193;RPL=0;RPP=20.3821;RPPR=422.104;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=193;SRP=422.104;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:992:0:0:0,-7.52575,-89.5692 0/0:35:35,0:35:1416:0:0:0,-10.536,-127.69 0/0:24:24,0:24:971:0:0:0,-7.22472,-87.6879 0/0:43:43,0:43:1713:0:0:0,-12.9443,-154.389 0/1:44:36,8:36:1424:8:320:-15.9208,0,-115.167 0/0:30:30,0:30:1185:0:0:0,-9.0309,-106.929 dDocent_Contig_10519 39 . T G 9404.99 . AB=0.487141;ABP=3.9597;AC=6;AF=0.5;AN=12;AO=322;CIGAR=1X;DP=661;DPB=661;DPRA=0;EPP=702.224;EPPR=739.139;GTI=0;LEN=1;MEANALT=1;MQM=59.9752;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.956522;PAIREDR=0.938053;PAO=0;PQA=0;PQR=0;PRO=0;QA=12774;QR=13466;RO=339;RPL=0;RPP=702.224;RPPR=739.139;RPR=322;RUN=1;SAF=322;SAP=702.224;SAR=0;SRF=339;SRP=739.139;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:103:42,61:42:1688:61:2415:-186.492,0,-121.14 0/1:197:91,106:91:3616:106:4210:-319.54,0,-266.175 0/1:75:18,57:18:726:57:2240:-179.186,0,-43.0883 0/1:127:69,58:69:2704:58:2315:-170.275,0,-205.254 0/1:85:62,23:62:2482:23:924:-57.8775,0,-197.939 0/1:74:57,17:57:2250:17:670:-38.3515,0,-180.375 dDocent_Contig_10520 21 . C T 7708.04 . AB=0.462069;ABP=6.63441;AC=8;AF=0.666667;AN=12;AO=252;CIGAR=1X;DP=410;DPB=410;DPRA=0;EPP=550.221;EPPR=346.103;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993671;PAO=0;PQA=0;PQR=0;PRO=0;QA=9682;QR=6388;RO=158;RPL=0;RPP=550.221;RPPR=346.103;RPR=252;RUN=1;SAF=252;SAP=550.221;SAR=0;SRF=158;SRP=346.103;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:46:18,28:18:723:28:1100:-85.4499,0,-51.5466 0/1:39:28,11:28:1129:11:425:-26.8602,0,-90.1508 0/1:92:40,52:40:1621:52:2005:-152.975,0,-118.418 0/1:113:70,43:70:2835:43:1630:-112.936,0,-221.223 1/1:61:0,61:0:0:61:2336:-210.439,-18.3628,0 1/1:59:2,57:2:80:57:2186:-189.366,-10.1692,0 dDocent_Contig_10521 98 . N T 175.045 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=8.76405;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=191;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:6:0,6:0:0:6:191:-17.5044,-1.80618,0 dDocent_Contig_10522 22 . G A 2333.81 . AB=0.421348;ABP=12.5745;AC=7;AF=0.583333;AN=12;AO=81;CIGAR=1X;DP=184;DPB=184;DPRA=0;EPP=178.9;EPPR=226.672;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.962963;PAIREDR=0.941748;PAO=0;PQA=0;PQR=0;PRO=0;QA=3268;QR=4053;RO=103;RPL=0;RPP=178.9;RPPR=226.672;RPR=81;RUN=1;SAF=81;SAP=178.9;SAR=0;SRF=103;SRP=226.672;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:21,17:21:799:17:687:-50.7197,0,-60.7692 0/1:54:37,17:37:1468:17:687:-45.9022,0,-116.115 0/1:29:18,11:18:723:11:447:-31.8556,0,-56.6625 0/1:42:22,20:22:866:20:798:-59.4928,0,-65.6089 1/1:6:0,6:0:0:6:243:-22.2482,-1.80618,0 0/1:15:5,10:5:197:10:406:-32.3846,0,-13.5906 dDocent_Contig_10523 7 . T C 197.247 . AB=0.171053;ABP=74.4403;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=173;DPB=173;DPRA=1.38043;EPP=35.5824;EPPR=346.103;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993671;PAO=0;PQA=0;PQR=0;PRO=0;QA=578;QR=6014;RO=158;RPL=0;RPP=35.5824;RPPR=346.103;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=158;SRP=346.103;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:25,1:25:947:1:39:0,-3.93022,-81.6459 0/0:25:24,1:24:916:1:38:0,-3.72848,-78.9595 0/1:46:38,8:38:1467:8:306:-14.0532,0,-118.458 0/1:30:25,5:25:950:5:195:-8.8933,0,-76.7844 0/0:24:24,0:24:889:0:0:0,-7.22472,-80.3202 0/0:22:22,0:22:845:0:0:0,-6.62266,-76.3729 dDocent_Contig_10524 10 . G T 219.519 . AB=0.177778;ABP=84.1751;AC=3;AF=0.25;AN=12;AO=19;CIGAR=1X;DP=191;DPB=191;DPRA=0.992188;EPP=44.2683;EPPR=376.504;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.105263;PAIREDR=0.44186;PAO=0;PQA=0;PQR=0;PRO=0;QA=709;QR=6565;RO=172;RPL=0;RPP=44.2683;RPPR=376.504;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=172;SRP=376.504;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:33,5:33:1236:5:182:-5.29293,0,-100.084 0/0:36:36,0:36:1390:0:0:0,-10.8371,-125.378 0/0:28:28,0:28:1070:0:0:0,-8.42884,-96.601 0/0:37:34,3:34:1291:3:118:0,-0.135602,-105.475 0/1:24:21,3:21:816:3:118:-3.77779,0,-66.5382 0/1:28:20,8:20:762:8:291:-18.1013,0,-60.4772 dDocent_Contig_10525 152 . A T 470.407 . AB=0.339286;ABP=15.5738;AC=2;AF=0.25;AN=8;AO=20;CIGAR=1X;DP=195;DPB=195;DPRA=0.569444;EPP=46.4397;EPPR=383.018;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=777;QR=6840;RO=175;RPL=0;RPP=46.4397;RPPR=383.018;RPR=20;RUN=1;SAF=0;SAP=46.4397;SAR=20;SRF=0;SRP=383.018;SRR=175;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 0/1:11:7,4:7:279:4:149:-10.4569,0,-22.1696 0/1:45:30,15:30:1145:15:591:-39.9817,0,-89.7917 0/0:67:66,1:66:2580:1:37:0,-16.4712,-228.658 0/0:72:72,0:72:2836:0:0:0,-21.6742,-255.374 dDocent_Contig_10526 37 . T G 130.776 . AB=0.127273;ABP=202.115;AC=4;AF=0.333333;AN=12;AO=30;CIGAR=1X;DP=280;DPB=280;DPRA=0;EPP=7.64277;EPPR=40.846;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.466667;PAIREDR=0.44;PAO=0;PQA=0;PQR=0;PRO=0;QA=1072;QR=8904;RO=250;RPL=0;RPP=68.1545;RPPR=545.878;RPR=30;RUN=1;SAF=19;SAP=7.64277;SAR=11;SRF=158;SRP=40.846;SRR=92;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:49:41,8:41:1481:8:271:-9.9701,0,-118.817 0/0:54:50,4:50:1799:4:142:0,-3.12669,-149.043 0/1:34:31,3:31:1098:3:115:-0.489875,0,-88.8887 0/0:61:56,5:56:1984:5:185:0,-1.35437,-161.806 0/1:40:35,5:35:1224:5:179:-4.41747,0,-98.4116 0/1:42:37,5:37:1318:5:180:-3.90845,0,-106.264 dDocent_Contig_10527 9 . T C 326.084 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=5;CIGAR=2M2X;DP=261;DPB=261;DPRA=0.855932;EPP=13.8677;EPPR=454.677;GTI=0;LEN=1;MEANALT=3.5;MQM=46;MQMR=56.4615;NS=6;NUMALT=5;ODDS=0;PAIRED=0.6;PAIREDR=0.293269;PAO=0;PQA=0;PQR=0;PRO=0;QA=199;QR=7883;RO=208;RPL=0;RPP=13.8677;RPPR=454.677;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=208;SRP=454.677;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:59:52,0,0,3,0,2:52:1962:0,0,3,0,2:0,0,36,0,78:0,-15.6536,-174.955,-15.6536,-174.955,-174.955,-14.2229,-173.408,-173.408,-172.505,-15.6536,-174.955,-174.955,-173.408,-174.955,-9.19235,-168.542,-168.542,-166.996,-168.542,-167.94 0|0:60:49,2,4,0,2,0:49:1849:2,4,0,2,0:78,156,0,80,0:0,-10.7251,-160.631,-4.12523,-150.614,-153.446,-14.7505,-161.233,-154.65,-165.269,-10.3704,-156.846,-150.263,-160.882,-160.28,-14.7505,-161.233,-154.65,-165.269,-160.882,-165.269 0|0:41:37,0,0,0,3,0:37:1417:0,0,0,3,0:0,0,0,119,0:0,-11.1381,-126.247,-11.1381,-126.247,-126.247,-11.1381,-126.247,-126.247,-126.247,-1.33615,-116.456,-116.456,-116.456,-115.553,-11.1381,-126.247,-126.247,-126.247,-116.456,-126.247 0|0:50:36,7,2,2,0,1:36:1366:7,2,2,0,1:269,77,68,0,39:-6.82656,0,-109.073,-13.4687,-106.98,-124.042,-12.6896,-106.206,-119.67,-123.268,-17.6636,-111.18,-124.644,-123.87,-128.845,-14.4526,-107.973,-121.438,-120.664,-125.638,-125.337 0|0:19:13,0,0,0,0,6:13:487:0,0,0,0,6:0,0,0,0,232:-15.5295,-19.4429,-54.5019,-19.4429,-54.5019,-54.5019,-19.4429,-54.5019,-54.5019,-54.5019,-19.4429,-54.5019,-54.5019,-54.5019,-54.5019,0,-35.4286,-35.4286,-35.4286,-35.4286,-33.6224 0|0:32:21,7,0,0,0,4:21:802:7,0,0,0,4:272,0,0,0,151:-15.4742,0,-62.9858,-21.7958,-65.093,-86.8877,-21.7958,-65.093,-86.8877,-86.8877,-21.7958,-65.093,-86.8877,-86.8877,-86.8877,-9.42788,-52.7244,-74.5191,-74.5191,-74.5191,-73.3149 dDocent_Contig_10528 10 . G A 113.814 . AB=0.128571;ABP=86.8912;AC=3;AF=0.25;AN=12;AO=9;CIGAR=2X;DP=121;DPB=121;DPRA=0.972222;EPP=22.5536;EPPR=237.529;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.333333;PAIREDR=0.555556;PAO=0;PQA=0;PQR=0;PRO=0;QA=348;QR=4200;RO=108;RPL=0;RPP=22.5536;RPPR=237.529;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=108;SRP=237.529;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:16:13,3,0:13:479:3,0:117,0:-6.09373,0,-38.631,-10.0071,-39.5341,-49.1556 0|0:24:24,0,0:24:911:0,0:0,0:0,-7.22472,-82.2925,-7.22472,-82.2925,-82.2925 0|1:9:8,1,0:8:320:1,0:39,0:-1.18729,0,-26.459,-3.59553,-26.76,-29.9648 0|1:45:40,5,0:40:1581:5,0:192,0:-4.10238,0,-128.989,-16.1436,-130.494,-146.253 0|0:15:12,0,3:12:480:0,3:0,117:-6.39476,-10.0071,-49.5554,0,-39.9399,-39.0368 0|0:12:11,0,1:11:429:0,1:0,37:-0.0854694,-3.3968,-38.6774,0,-35.6521,-35.351 dDocent_Contig_10529 19 . G C 113.033 . AB=0.214286;ABP=22.8638;AC=1;AF=0.125;AN=8;AO=6;CIGAR=1X;DP=133;DPB=133;DPRA=0.8;EPP=16.0391;EPPR=278.787;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=234;QR=5045;RO=127;RPL=0;RPP=16.0391;RPPR=278.787;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=127;SRP=278.787;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:748:0:0:0,-5.71957,-67.6378 0/0:70:70,0:70:2778:0:0:0,-21.0721,-250.135 0/0:16:16,0:16:645:0:0:0,-4.81648,-58.3835 0/1:28:22,6:22:874:6:234:-13.0023,0,-70.543 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10531 136 . A T 4330.82 . AB=0.912621;ABP=155.33;AC=3;AF=0.25;AN=12;AO=136;CIGAR=1X;DP=203;DPB=203;DPRA=5;EPP=298.331;EPPR=148.499;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5154;QR=2575;RO=67;RPL=0;RPP=298.331;RPPR=148.499;RPR=136;RUN=1;SAF=0;SAP=298.331;SAR=136;SRF=0;SRP=148.499;SRR=67;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:1:1,0:1:39:0:0:0,-0.30103,-3.89656 0/0:30:30,0:30:1149:0:0:0,-9.0309,-103.707 0/0:12:12,0:12:468:0:0:0,-3.61236,-42.4726 0/0:15:15,0:15:568:0:0:0,-4.51545,-51.4607 1/1:42:0,42:0:0:42:1585:-142.91,-12.6433,0 0/1:103:9,94:9:351:94:3569:-290.333,0,-0.945738 dDocent_Contig_10532 18 . G T 79.1674 . AB=0.166667;ABP=31.9633;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=178;DPB=178;DPRA=1.06897;EPP=16.0391;EPPR=376.504;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.7384;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994186;PAO=0;PQA=0;PQR=0;PRO=0;QA=233;QR=6850;RO=172;RPL=0;RPP=16.0391;RPPR=376.504;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=172;SRP=376.504;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:31,1:31:1256:1:32:0,-6.43365,-110.107 0/0:24:24,0:24:926:0:0:0,-7.22472,-83.6373 0/1:30:25,5:25:991:5:201:-9.43962,0,-78.3742 0/0:51:51,0:51:2040:0:0:0,-15.3525,-183.786 0/0:25:25,0:25:1007:0:0:0,-7.52575,-90.9271 0/0:16:16,0:16:630:0:0:0,-4.81648,-57.0273 dDocent_Contig_10533 10 . C A 391.887 . AB=0.228261;ABP=62.0177;AC=4;AF=0.333333;AN=12;AO=21;CIGAR=1X;DP=120;DPB=120;DPRA=1.64286;EPP=48.6112;EPPR=217.986;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=807;QR=3848;RO=99;RPL=0;RPP=48.6112;RPPR=217.986;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=99;SRP=217.986;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:11:11,0:11:415:0:0:0,-3.31133,-37.6925 0/1:8:6,2:6:241:2:79:-5.089,0,-19.6586 0/1:34:29,5:29:1151:5:195:-7.68793,0,-93.6382 0/0:17:17,0:17:677:0:0:0,-5.11751,-61.2621 0/1:36:24,12:24:889:12:462:-31.0875,0,-69.4741 0/1:14:12,2:12:475:2:71:-2.52501,0,-38.8877 dDocent_Contig_10534 8 . G T 235.914 . AB=0.115385;ABP=36.4176;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=2M1X1M1X;DP=112;DPB=109.8;DPRA=1.38667;EPP=9.52472;EPPR=202.876;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.6458;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.989583;PAO=0;PQA=0;PQR=0;PRO=0;QA=117;QR=3648;RO=96;RPL=0;RPP=9.52472;RPPR=211.472;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=95;SRP=202.876;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:32:31,0,0,0:31:1187:0,0,0:0,0,0:0,-9.33193,-105.464,-9.33193,-105.464,-105.464,-9.33193,-105.464,-105.464,-105.464 0|1:26:23,0,0,3:23:868:0,0,3:0,0,117:-3.0836,-10.0073,-81.1353,-10.0073,-81.1353,-81.1353,0,-71.5162,-71.5162,-70.6131 0|0:18:18,0,0,0:18:678:0,0,0:0,0,0:0,-5.41854,-61.3528,-5.41854,-61.3528,-61.3528,-5.41854,-61.3528,-61.3528,-61.3528 0|0:20:19,0,0,0:19:721:0,0,0:0,0,0:0,-5.71957,-64.8416,-5.71957,-64.8416,-64.8416,-5.71957,-64.8416,-64.8416,-64.8416 0|0:11:0,9,2,0:0:0:9,2,0:239,58,0:-23.6805,-4.9068,-2.19753,-19.0592,0,-18.4572,-23.6805,-4.9068,-19.0592,-23.6805 0|0:5:5,0,0,0:5:194:0,0,0:0,0,0:0,-1.50515,-17.8328,-1.50515,-17.8328,-17.8328,-1.50515,-17.8328,-17.8328,-17.8328 dDocent_Contig_10535 31 . C A 744.629 . AB=0.270492;ABP=58.8278;AC=4;AF=0.333333;AN=12;AO=33;CIGAR=1X2M1X2M1X;DP=144;DPB=144;DPRA=2.77273;EPP=74.6689;EPPR=241.872;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.981818;PAO=0;PQA=0;PQR=0;PRO=0;QA=1282;QR=4315;RO=110;RPL=0;RPP=74.6689;RPPR=241.872;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=110;SRP=241.872;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:6:6,0:6:236:0:0:0,-1.80618,-21.6121 0|0:16:16,0:16:631:0:0:0,-4.81648,-57.1256 0|1:12:11,1:11:437:1:39:-0.284205,0,-36.0731 0|1:12:9,3:9:353:3:104:-6.08841,0,-28.5181 0|1:27:12,15:12:472:15:586:-44.9513,0,-34.7031 0|1:71:56,14:56:2186:14:553:-28.6436,0,-175.467 dDocent_Contig_10536 56 . T A 1212.51 . AB=0.253659;ABP=111.065;AC=3;AF=0.25;AN=12;AO=52;CIGAR=1X;DP=372;DPB=372;DPRA=1.22754;EPP=115.927;EPPR=697.881;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2080;QR=12858;RO=320;RPL=52;RPP=115.927;RPPR=697.881;RPR=0;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=320;SRP=697.881;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:38,0:38:1509:0:0:0,-11.4391,-136.055 0/0:124:124,0:124:4985:0:0:0,-37.3277,-448.523 0/0:5:5,0:5:201:0:0:0,-1.50515,-18.4705 0/1:82:72,10:72:2903:10:405:-12.1262,0,-236.674 0/1:50:23,27:23:924:27:1081:-82.525,0,-68.409 0/1:73:58,15:58:2336:15:594:-31.8217,0,-188.414 dDocent_Contig_10538 57 . A T 66.3265 . AB=0.133333;ABP=55.5599;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=186;DPB=186;DPRA=1.59574;EPP=16.0391;EPPR=393.875;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994444;PAO=0;PQA=0;PQR=0;PRO=0;QA=237;QR=7164;RO=180;RPL=6;RPP=16.0391;RPPR=393.875;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=180;SRP=393.875;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:67:67,0:67:2679:0:0:0,-20.169,-241.234 0/1:45:39,6:39:1549:6:237:-8.15534,0,-126.107 0/0:27:27,0:27:1080:0:0:0,-8.12781,-97.4878 0/0:41:41,0:41:1620:0:0:0,-12.3422,-146.032 0/0:3:3,0:3:117:0:0:0,-0.90309,-10.9098 0/0:3:3,0:3:119:0:0:0,-0.90309,-11.095 dDocent_Contig_10539 15 . T C 333.041 . AB=0.193548;ABP=78.8717;AC=2;AF=0.166667;AN=12;AO=26;CIGAR=1X;DP=379;DPB=379;DPRA=1.04865;EPP=59.4686;EPPR=769.54;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.985836;PAO=0;PQA=0;PQR=0;PRO=0;QA=1033;QR=13967;RO=353;RPL=0;RPP=59.4686;RPPR=769.54;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=353;SRP=769.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:44:33,11:33:1293:11:440:-26.7081,0,-103.39 0/0:101:93,8:93:3637:8:324:0,-0.874837,-297.827 0/1:49:42,7:42:1663:7:269:-9.81767,0,-135.15 0/0:71:71,0:71:2852:0:0:0,-21.3731,-256.782 0/0:56:56,0:56:2229:0:0:0,-16.8577,-200.767 0/0:58:58,0:58:2293:0:0:0,-17.4597,-206.534 dDocent_Contig_10540 36 . A G 1979.37 . AB=0.237598;ABP=232.069;AC=6;AF=0.5;AN=12;AO=91;CIGAR=1X;DP=383;DPB=383;DPRA=0;EPP=200.614;EPPR=637.08;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9966;NS=6;NUMALT=1;ODDS=0;PAIRED=0.934066;PAIREDR=0.893836;PAO=0;PQA=0;PQR=0;PRO=0;QA=3583;QR=11569;RO=292;RPL=0;RPP=200.614;RPPR=637.08;RPR=91;RUN=1;SAF=91;SAP=200.614;SAR=0;SRF=292;SRP=637.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:45:35,10:35:1410:10:405:-23.2637,0,-113.605 0/1:104:72,32:72:2824:32:1263:-82.6223,0,-222.97 0/1:33:24,9:24:946:9:324:-19.562,0,-75.5068 0/1:72:55,17:55:2209:17:667:-38.6818,0,-177.308 0/1:57:42,15:42:1653:15:605:-37.6286,0,-131.844 0/1:72:64,8:64:2527:8:319:-7.40011,0,-205.902 dDocent_Contig_10542 23 . T C 2730.12 . AB=0.694118;ABP=30.8307;AC=5;AF=0.416667;AN=12;AO=86;CIGAR=1X;DP=541;DPB=541;DPRA=0.130536;EPP=189.757;EPPR=991.03;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9648;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3362;QR=18053;RO=455;RPL=0;RPP=189.757;RPPR=991.03;RPR=86;RUN=1;SAF=86;SAP=189.757;SAR=0;SRF=455;SRP=991.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:27:0,27:0:0:27:1058:-95.508,-8.12781,0 0/1:14:2,12:2:81:12:454:-36.9841,0,-3.47131 0/1:38:17,21:17:678:21:826:-63.2173,0,-49.9103 0/1:33:7,26:7:284:26:1024:-82.522,0,-16 0/0:272:272,0:272:10774:0:0:0,-81.8802,-968.987 0/0:157:157,0:157:6236:0:0:0,-47.2617,-560.849 dDocent_Contig_10543 13 . G A 100.328 . AB=0.12987;ABP=94.6352;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=193;DPB=193;DPRA=1.32759;EPP=24.725;EPPR=400.39;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994536;PAO=0;PQA=0;PQR=0;PRO=0;QA=396;QR=7337;RO=183;RPL=0;RPP=24.725;RPPR=400.39;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=183;SRP=400.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:631:0:0:0,-4.81648,-57.1201 0/0:43:43,0:43:1723:0:0:0,-12.9443,-155.285 0/0:27:27,0:27:1092:0:0:0,-8.12781,-98.565 0/0:30:30,0:30:1199:0:0:0,-9.0309,-108.189 0/1:53:48,5:48:1938:5:198:-2.24279,0,-158.66 0/1:24:19,5:19:754:5:198:-10.9723,0,-60.9591 dDocent_Contig_10544 48 . A T 39.2168 . AB=0.15;ABP=24.2907;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=131;DPB=131;DPRA=0.757895;EPP=11.6962;EPPR=278.787;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0.771654;PAO=0;PQA=0;PQR=0;PRO=0;QA=164;QR=5101;RO=127;RPL=0;RPP=11.6962;RPPR=278.787;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=127;SRP=278.787;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:2:2,0:2:80:0:0:0,-0.60206,-7.59157 0/1:20:17,3:17:685:3:123:-5.44419,0,-55.9597 0/0:19:19,0:19:773:0:0:0,-5.71957,-69.8889 0/0:16:15,1:15:589:1:41:0,-0.721913,-49.2526 0/0:35:35,0:35:1413:0:0:0,-10.536,-127.419 0/0:39:39,0:39:1561:0:0:0,-11.7402,-140.719 dDocent_Contig_10545 16 . A G 277.192 . AB=0.75;ABP=9.52472;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=100;DPB=100;DPRA=1.125;EPP=24.725;EPPR=198.443;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.911111;PAO=0;PQA=0;PQR=0;PRO=0;QA=401;QR=3592;RO=90;RPL=0;RPP=24.725;RPPR=198.443;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=90;SRP=198.443;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:8:8,0:8:306:0:0:0,-2.40824,-27.8938 0/0:24:23,1:23:919:1:40:0,-3.22904,-79.0168 0/0:5:5,0:5:204:0:0:0,-1.50515,-18.744 0/1:12:3,9:3:116:9:361:-29.2421,0,-7.20315 0/0:17:17,0:17:668:0:0:0,-5.11751,-60.4443 0/0:34:34,0:34:1379:0:0:0,-10.235,-124.363 dDocent_Contig_10547 8 . G A 137.111 . AB=0.181818;ABP=41.702;AC=1;AF=0.125;AN=8;AO=11;CIGAR=1X;DP=257;DPB=257;DPRA=0.538922;EPP=26.8965;EPPR=537.193;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.971545;PAO=0;PQA=0;PQR=0;PRO=0;QA=427;QR=9403;RO=246;RPL=0;RPP=26.8965;RPPR=537.193;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=246;SRP=537.193;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:44:36,8:36:1384:8:311:-15.109,0,-111.598 0/0:85:85,0:85:3260:0:0:0,-25.5875,-293.547 0/0:46:43,3:43:1640:3:116:0,-3.02967,-137.045 0/0:82:82,0:82:3119:0:0:0,-24.6845,-280.872 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10548 1 . N G 1051.28 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=34;CIGAR=1X;DP=34;DPB=34;DPRA=0;EPP=76.8404;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1137;QR=0;RO=0;RPL=0;RPP=76.8404;RPPR=0;RPR=34;RUN=1;SAF=0;SAP=76.8404;SAR=34;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:8:0,8:0:0:8:280:-25.54,-2.40824,0 1/1:8:0,8:0:0:8:265:-24.1725,-2.40824,0 1/1:4:0,4:0:0:4:111:-10.264,-1.20412,0 1/1:10:0,10:0:0:10:345:-31.3837,-3.0103,0 1/1:3:0,3:0:0:3:101:-9.42373,-0.90309,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_10549 107 . N A 1125.3 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=53;CIGAR=1X;DP=55;DPB=55;DPRA=0;EPP=118.098;EPPR=0;GTI=0;LEN=1;MEANALT=1.5;MQM=39;MQMR=0;NS=4;NUMALT=1;ODDS=2.1684e-19;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1246;QR=0;RO=0;RPL=0;RPP=118.098;RPPR=0;RPR=53;RUN=1;SAF=0;SAP=118.098;SAR=53;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:16:0,15:0:0:15:328:-29.4923,-4.51545,0 1/1:21:0,21:0:0:21:477:-42.9058,-6.32163,0 ./.:.:.:.:.:.:.:. 1/1:16:0,15:0:0:15:394:-35.0953,-4.51545,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:47:-4.43469,-0.60206,0 dDocent_Contig_10550 115 . C T 89.7199 . AB=0.125;ABP=42.0968;AC=4;AF=0.333333;AN=12;AO=5;CIGAR=1X2M1X;DP=55;DPB=55;DPRA=11;EPP=13.8677;EPPR=94.2121;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=154;QR=1421;RO=42;RPL=0;RPP=13.8677;RPPR=94.2121;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=94.2121;SRR=42;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:14:10,3,0:10:347:3,0:101,0:-5.15633,0,-27.2933,-8.16663,-28.1963,-36.378 0|1:15:12,0,2:12:389:0,2:0,58:-0.977853,-4.59021,-35.9924,0,-31.3802,-30.7781 0|0:7:5,2,0:5:170:2,0:58,0:-3.40197,0,-13.5276,-4.90712,-14.1297,-18.7326 0|1:17:15,0,2:15:515:0,2:0,61:-0.676249,-5.1917,-47.0436,0,-42.1614,-41.5593 1|1:1:0,0,1:0:0:0,1:0,35:-3.49863,-3.49863,-3.49863,-0.30103,-0.30103,0 0|0:1:0,0,0:0:0:0,0:0,0:0,0,0,0,0,0 dDocent_Contig_10552 24 . G C 110.187 . AB=0.25;ABP=13.8677;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=163;DPB=163;DPRA=1.16505;EPP=20.3821;EPPR=339.589;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=325;QR=6091;RO=155;RPL=0;RPP=20.3821;RPPR=339.589;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=155;SRP=339.589;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:39,0:39:1538:0:0:0,-11.7402,-138.673 0/0:40:37,3:37:1462:3:123:0,-0.576411,-120.371 0/0:56:56,0:56:2181:0:0:0,-16.8577,-196.478 0/1:20:15,5:15:590:5:202:-12.5413,0,-47.4148 0/0:3:3,0:3:120:0:0:0,-0.90309,-11.1877 0/0:5:5,0:5:200:0:0:0,-1.50515,-18.3784 dDocent_Contig_10553 7 . T C 2051.65 . AB=0.0366162;ABP=1480.15;AC=3;AF=0.25;AN=12;AO=29;CIGAR=1X2M1X8M1X;DP=792;DPB=792.231;DPRA=0;EPP=65.983;EPPR=246.215;GTI=0;LEN=1;MEANALT=33.8333;MQM=32.3448;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=917;QR=4391;RO=112;RPL=0;RPP=65.983;RPPR=246.215;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=112;SRP=246.215;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:130:20,8,7,11,7,10,5,2,11,3:20:788:8,7,11,7,10,5,2,11,3:312,189,276,252,326,166,79,421,117:-27.8792,-10.1044,-72.5426,-20.8946,-61.946,-83.6323,-14.8502,-55.9015,-66.6909,-76.3835,-14.2801,-55.3322,-66.1214,-60.0769,-77.0189,-10.1127,-51.1649,-61.9542,-55.9099,-55.3403,-71.9483,-21.8183,-62.8699,-73.6588,-67.6144,-67.0452,-62.8779,-85.1584,-27.397,-68.4485,-79.2373,-73.1926,-72.6238,-68.4563,-80.1613,-91.6401,0,-41.0532,-51.8426,-45.7982,-45.2287,-41.0613,-52.7664,-58.345,-61.5362,-24.5502,-65.6018,-76.3907,-70.3461,-69.7772,-65.6097,-77.3147,-82.8933,-55.4984,-88.4925 1|0:170:1,7,14,16,8,11,7,0,22,5:1:38:7,14,16,8,11,7,0,22,5:278,336,466,263,334,209,0,633,202:-77.487,-57.8879,-58.8979,-55.5466,-38.7637,-54.4495,-43.877,-27.0938,-24.7534,-42.1778,-57.8018,-41.0187,-38.6777,-27.0078,-58.5108,-53.4814,-36.6983,-34.3576,-22.6876,-36.6123,-53.2874,-62.9795,-46.1965,-43.8556,-32.1858,-46.1105,-41.7902,-63.9895,-77.788,-61.0051,-58.6639,-46.9942,-60.919,-56.5987,-66.0968,-80.9052,-30.7938,-14.0105,-11.6705,0,-13.9246,-9.6044,-19.1026,-33.9111,-27.2885,-61.2575,-44.4744,-42.1332,-30.4633,-44.3883,-40.0679,-49.5661,-64.3748,-17.38,-62.8696 0|1:137:22,7,14,3,3,2,9,3,11,2:22:865:7,14,3,3,2,9,3,11,2:276,360,112,106,67,280,120,307,80:-17.7732,-3.41312,-72.4758,0,-50.1883,-66.9545,-15.3323,-65.52,-62.1062,-85.5978,-16.111,-66.2987,-62.8849,-78.2167,-86.3764,-19.4289,-69.6163,-66.2025,-81.5343,-82.3129,-89.995,-4.07241,-54.2608,-50.8477,-66.1789,-66.9575,-70.2752,-72.5325,-14.5073,-64.6952,-61.2813,-76.6132,-77.3918,-80.7095,-65.354,-84.7729,-1.74101,-51.9295,-48.5167,-63.8475,-64.6262,-67.9438,-52.5887,-63.0226,-69.599,-17.8034,-67.991,-64.5771,-79.909,-80.6876,-84.0052,-68.6498,-79.0841,-66.3184,-88.3697 1|0:99:1,2,7,2,5,9,2,9,8,1:1:40:2,7,2,5,9,2,9,8,1:78,171,57,176,287,69,346,250,41:-45.7147,-40.0585,-42.7526,-34.6296,-31.9685,-35.8185,-42.0297,-39.3686,-33.9398,-44.7237,-32.1039,-29.4428,-24.0141,-31.414,-33.895,-25.1147,-22.4535,-17.0254,-24.4249,-14.4989,-25.7016,-40.9491,-38.288,-32.8592,-40.2592,-30.3334,-23.3442,-43.6432,-17.6056,-14.9443,-9.51567,-16.9157,-6.98937,0,-15.835,-18.1926,-27.1663,-24.5052,-19.077,-26.4765,-16.5506,-9.56162,-25.3959,-2.05173,-28.0543,-42.6305,-39.9694,-34.5405,-41.9406,-32.0148,-25.0255,-40.86,-17.5165,-27.0772,-45.6256 0|0:125:39,6,2,1,8,9,5,0,12,8:39:1528:6,2,1,8,9,5,0,12,8:238,54,22,273,236,162,0,386,312:-16.6175,-10.2849,-134.158,-24.6424,-132.249,-149.717,-26.9497,-134.556,-148.911,-152.325,-6.7589,-114.368,-128.723,-131.03,-130.03,-12.2687,-119.875,-134.229,-136.537,-116.349,-135.235,-16.6376,-124.245,-138.6,-140.907,-120.719,-126.226,-140.81,-28.3576,-135.964,-150.319,-152.626,-132.438,-137.944,-142.315,-154.034,0,-107.609,-121.964,-124.271,-104.083,-109.59,-113.96,-125.679,-122.067,-2.70613,-110.317,-124.672,-126.979,-106.791,-112.298,-116.668,-128.387,-100.032,-125.979 0|0:131:29,2,4,0,13,8,1,12,9,4:29:1132:2,4,0,13,8,1,12,9,4:80,108,0,476,227,31,481,296,146:-30.9117,-33.5842,-126.056,-32.2105,-119.227,-124.079,-39.6416,-126.658,-125.284,-132.715,-1.64173,-88.6618,-87.2879,-94.7188,-90.8054,-23.7454,-110.762,-109.388,-116.819,-78.8231,-114.41,-37.4237,-124.44,-123.066,-130.497,-92.5009,-114.601,-130.196,0,-87.021,-85.647,-93.0781,-55.0808,-77.182,-90.8602,-89.4657,-16.5183,-103.536,-102.162,-109.593,-71.5969,-93.6975,-107.375,-69.9559,-106.884,-27.7143,-114.732,-113.357,-120.789,-82.7923,-104.893,-118.571,-81.1515,-97.6668,-119.584 dDocent_Contig_10554 29 . T A 1058.67 . AB=0.325581;ABP=25.735;AC=4;AF=0.4;AN=10;AO=37;CIGAR=1X;DP=125;DPB=125;DPRA=2.11111;EPP=83.3548;EPPR=194.1;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1489;QR=3480;RO=88;RPL=0;RPP=83.3548;RPPR=194.1;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=88;SRP=194.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:590:0:0:0,-4.51545,-53.4343 0/1:48:26,22:26:1026:22:885:-65.5079,0,-78.1865 0/0:15:15,0:15:592:0:0:0,-4.51545,-53.6194 0/1:38:32,6:32:1272:6:239:-10.4448,0,-103.311 ./.:.:.:.:.:.:.:. 1/1:9:0,9:0:0:9:365:-33.2151,-2.70927,0 dDocent_Contig_10555 65 . G A 608.887 . AB=0.236842;ABP=94.4407;AC=3;AF=0.25;AN=12;AO=45;CIGAR=1X;DP=320;DPB=320;DPRA=0.903448;EPP=100.727;EPPR=600.165;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9345;NS=6;NUMALT=1;ODDS=0;PAIRED=0.311111;PAIREDR=0.436364;PAO=0;PQA=0;PQR=0;PRO=0;QA=1547;QR=9284;RO=275;RPL=45;RPP=100.727;RPPR=582.92;RPR=0;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=273;SRP=582.92;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:37,17:37:1248:17:593:-37.4426,0,-96.2924 0/1:44:38,6:38:1292:6:208:-5.81427,0,-103.333 0/0:45:41,4:41:1391:4:140:0,-0.601421,-112.538 0/1:54:41,13:41:1420:13:431:-22.8536,0,-111.843 0/0:58:58,0:58:1942:0:0:0,-17.4597,-175.054 0/0:65:60,5:60:1991:5:175:0,-3.47325,-163.365 dDocent_Contig_10556 34 . C G 77.6936 . AB=0.126984;ABP=79.1497;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=531;DPB=531;DPRA=0.664577;EPP=42.0968;EPPR=1116.98;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996101;PAO=0;PQA=0;PQR=0;PRO=0;QA=691;QR=20232;RO=513;RPL=0;RPP=42.0968;RPPR=1116.98;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=513;SRP=1116.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:81:75,6:75:2949:6:241:0,-2.31763,-243.448 0/0:68:64,4:64:2551:4:140:0,-7.5312,-216.783 0/0:133:133,0:133:5271:0:0:0,-40.037,-474.256 0/1:63:55,8:55:2173:8:310:-9.29223,0,-176.787 0/0:109:109,0:109:4296:0:0:0,-32.8123,-386.594 0/0:77:77,0:77:2992:0:0:0,-23.1793,-269.373 dDocent_Contig_10558 121 . G A 38.5106 . AB=0.142857;ABP=41.7866;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=149;DPB=149;DPRA=1.53509;EPP=13.8677;EPPR=315.702;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.2;PAIREDR=0.791667;PAO=0;PQA=0;PQR=0;PRO=0;QA=173;QR=5036;RO=144;RPL=0;RPP=13.8677;RPPR=315.702;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=315.702;SRR=144;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:575:0:0:0,-4.81648,-52.0847 0/0:38:38,0:38:1330:0:0:0,-11.4391,-120.002 0/0:25:25,0:25:894:0:0:0,-7.52575,-80.7801 0/0:14:14,0:14:464:0:0:0,-4.21442,-42.0745 0/1:35:30,5:30:1048:5:173:-5.37388,0,-84.0952 0/0:21:21,0:21:725:0:0:0,-6.32163,-65.5708 dDocent_Contig_10559 55 . A G 3460.09 . AB=0.226496;ABP=459.131;AC=5;AF=0.416667;AN=12;AO=168;CIGAR=1X;DP=845;DPB=845;DPRA=0;EPP=367.818;EPPR=1473.1;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.992614;PAO=0;PQA=0;PQR=0;PRO=0;QA=6636;QR=26653;RO=677;RPL=168;RPP=367.818;RPPR=1473.1;RPR=0;RUN=1;SAF=168;SAP=367.818;SAR=0;SRF=677;SRP=1473.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:143:134,9:134:5247:9:356:0,-10.6449,-439.718 0/1:138:124,14:124:4899:14:547:-8.02677,0,-399.288 0/1:130:118,12:118:4644:12:483:-4.68659,0,-378.753 0/1:149:132,17:132:5184:17:668:-15.5961,0,-421.581 0/1:139:78,61:78:3072:61:2396:-173.952,0,-234.737 0/1:146:91,55:91:3607:55:2186:-152.969,0,-280.729 dDocent_Contig_10561 77 . C T 43.7807 . AB=0.153846;ABP=30.0702;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X1M1X;DP=286;DPB=286;DPRA=1.81333;EPP=18.2106;EPPR=606.68;GTI=0;LEN=1;MEANALT=1.5;MQM=54.2857;MQMR=55.3957;NS=6;NUMALT=1;ODDS=0;PAIRED=0.571429;PAIREDR=0.478417;PAO=0;PQA=0;PQR=0;PRO=0;QA=266;QR=10368;RO=278;RPL=5;RPP=5.80219;RPPR=178.759;RPR=2;RUN=1;SAF=5;SAP=5.80219;SAR=2;SRF=214;SRP=178.759;SRR=64;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:28:28,0:28:1029:0:0:0,-8.42884,-92.2519 0|0:110:106,3:106:3917:3:111:0,-22.5958,-336.066 0|0:32:32,0:32:1219:0:0:0,-9.63296,-107.961 0|0:49:49,0:49:1849:0:0:0,-14.7505,-163.308 0|1:26:22,4:22:817:4:155:-5.90093,0,-64.751 0|0:41:41,0:41:1537:0:0:0,-12.3422,-135.599 dDocent_Contig_10562 13 . T C 317.306 . AB=0.121495;ABP=269.31;AC=3;AF=0.25;AN=12;AO=36;CIGAR=2M1X;DP=371;DPB=371;DPRA=0;EPP=81.1833;EPPR=687.024;GTI=0;LEN=1;MEANALT=2.83333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.277778;PAIREDR=0.415873;PAO=0;PQA=0;PQR=0;PRO=0;QA=1415;QR=12172;RO=315;RPL=0;RPP=81.1833;RPPR=687.024;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=315;SRP=687.024;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:60:49,3,0,6:49:1884:3,0,6:115,0,243:-5.31775,-10.6282,-164.395,-20.0682,-165.299,-174.737,0,-145.259,-154.697,-152.891 0|0:54:49,2,0,3:49:1910:2,0,3:79,0,122:0,-8.25413,-164.628,-14.7505,-165.231,-171.732,-4.6803,-155.166,-161.668,-160.764 0|0:38:30,2,3,2:30:1172:2,3,2:77,115,77:-0.405534,-3.11516,-98.8677,0,-90.0315,-95.4501,-3.11577,-93.1485,-90.0321,-98.8683 0|1:61:46,3,0,12:46:1774:3,0,12:119,0,482:-25.8744,-29.9267,-174.685,-39.7218,-175.588,-185.385,0,-135.867,-145.664,-142.051 0|1:55:48,0,0,6:48:1828:0,0,6:0,0,242:-5.75844,-20.2079,-170.157,-20.2079,-170.157,-170.157,0,-150.205,-150.205,-148.399 0|0:103:93,2,0,7:93:3604:2,0,7:79,0,249:0,-21.4881,-316.98,-27.9958,-317.582,-324.083,-7.74565,-297.305,-303.806,-301.699 dDocent_Contig_10563 22 . A T 77.5959 . AB=0.108911;ABP=137.19;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=1X;DP=485;DPB=485;DPRA=1.18403;EPP=48.9587;EPPR=1001.89;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.28;PAIREDR=0.263043;PAO=0;PQA=0;PQR=0;PRO=0;QA=974;QR=17576;RO=460;RPL=0;RPP=57.2971;RPPR=1001.89;RPR=25;RUN=1;SAF=24;SAP=48.9587;SAR=1;SRF=460;SRP=1001.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:78:76,2:76:2915:2:78:0,-16.0769,-255.094 0/0:86:86,0:86:3255:0:0:0,-25.8886,-293.071 0/0:58:58,0:58:2228:0:0:0,-17.4597,-200.725 0/1:101:90,11:90:3412:11:437:-9.28204,0,-276.791 0/0:60:55,5:55:2140:5:194:0,-0.229254,-174.981 0/0:102:95,7:95:3626:7:265:0,-6.4967,-302.235 dDocent_Contig_10564 8 . G T 675.307 . AB=0.186916;ABP=185.211;AC=3;AF=0.25;AN=12;AO=44;CIGAR=1X;DP=429;DPB=429;DPRA=0.875;EPP=98.5551;EPPR=785.555;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.979167;PAO=0;PQA=0;PQR=0;PRO=0;QA=1666;QR=14505;RO=384;RPL=0;RPP=98.5551;RPPR=836.856;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=378;SRP=785.555;SRR=6;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:71:62,8:62:2296:8:289:-5.14109,0,-185.679 0/1:57:46,11:46:1773:11:426:-21.536,0,-142.665 0/0:60:60,0:60:2250:0:0:0,-18.0618,-202.722 0/1:86:65,21:65:2431:21:796:-46.0754,0,-193.105 0/0:96:96,0:96:3644:0:0:0,-28.8989,-328.078 0/0:59:55,4:55:2111:4:155:0,-3.43533,-175.896 dDocent_Contig_10565 7 . T C 264.256 . AB=0.158879;ABP=111.158;AC=1;AF=0.0833333;AN=12;AO=27;CIGAR=1X;DP=668;DPB=668;DPRA=1.06811;EPP=61.6401;EPPR=1388.41;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.46395;PAO=0;PQA=0;PQR=0;PRO=0;QA=1044;QR=24240;RO=638;RPL=0;RPP=61.6401;RPPR=1388.41;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=638;SRP=1388.41;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:65:65,0:65:2479:0:0:0,-19.5669,-223.316 0/0:170:170,0:170:6441:0:0:0,-51.1751,-579.616 0/0:88:88,0:88:3348:0:0:0,-26.4906,-301.462 0/0:117:116,1:116:4448:1:37:0,-31.5227,-396.686 0/1:107:87,17:87:3298:17:658:-27.9484,0,-265.377 0/0:121:112,9:112:4226:9:349:0,-4.65387,-348.657 dDocent_Contig_10566 23 . G A 773.577 . AB=0.229814;ABP=105.096;AC=6;AF=0.5;AN=12;AO=37;CIGAR=1X;DP=161;DPB=161;DPRA=0;EPP=83.3548;EPPR=272.273;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1483;QR=4924;RO=124;RPL=0;RPP=83.3548;RPPR=272.273;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=124;SRP=272.273;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:11:10,1:10:389:1:40:-0.684349,0,-32.0516 0/1:43:38,5:38:1502:5:200:-5.43474,0,-122.484 0/1:17:14,3:14:559:3:121:-6.16248,0,-45.5349 0/1:36:31,5:31:1234:5:205:-7.99793,0,-100.487 0/1:22:16,6:16:634:6:242:-15.5347,0,-50.7657 0/1:32:15,17:15:606:17:675:-51.4462,0,-45.2431 dDocent_Contig_10567 209 . N G 92.3141 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=99;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:99:-9.23087,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10568 143 . T C 1680.39 . AB=0.2;ABP=61.6401;AC=8;AF=0.666667;AN=12;AO=55;CIGAR=1X;DP=116;DPB=116;DPRA=0;EPP=122.441;EPPR=135.47;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.836364;PAIREDR=0.786885;PAO=0;PQA=0;PQR=0;PRO=0;QA=2206;QR=2403;RO=61;RPL=0;RPP=122.441;RPPR=135.47;RPR=55;RUN=1;SAF=0;SAP=122.441;SAR=55;SRF=0;SRP=135.47;SRR=61;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:9:7,2:7:280:2:70:-3.93813,0,-22.8623 0/1:28:20,8:20:778:8:324:-21.1004,0,-61.9023 0/1:23:21,2:21:833:2:82:-0.855988,0,-68.3593 0/1:15:12,3:12:472:3:123:-6.94934,0,-38.3084 1/1:18:1,17:1:40:17:685:-57.9831,-1.42286,0 1/1:23:0,23:0:0:23:922:-83.2839,-6.92369,0 dDocent_Contig_10569 25 . G T 299.46 . AB=0.185185;ABP=26.2531;AC=0;AF=0;AN=12;AO=5;CIGAR=1M1X7M;DP=130;DPB=126;DPRA=1.5;EPP=13.8677;EPPR=231.015;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=59.7238;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.533333;PAO=0;PQA=0;PQR=0;PRO=0;QA=174;QR=4047;RO=105;RPL=0;RPP=13.8677;RPPR=231.015;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=105;SRP=231.015;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:27:21,3,0,3:21:822:3,0,3:113,0,119:-3.48435,-0.556589,-67.2371,-9.80598,-68.1402,-77.3978,0,-58.3435,-67.601,-66.6979 0|0:23:22,1,0,0:22:844:1,0,0:37,0,0:0,-3.22586,-72.5805,-6.62266,-72.8815,-75.908,-6.62266,-72.8815,-75.908,-75.908 0|0:15:15,0,0,0:15:581:0,0,0:0,0,0:0,-4.51545,-52.6304,-4.51545,-52.6304,-52.6304,-4.51545,-52.6304,-52.6304,-52.6304 0|0:27:17,0,5,5:17:635:0,5,5:0,174,197:-11.113,-16.2305,-68.1784,-2.10713,-54.0376,-52.5324,0,-51.9659,-37.8253,-50.4607 0|0:22:14,8,0,0:14:530:8,0,0:298,0,0:-20.5481,0,-41.4174,-24.7625,-43.8256,-68.2137,-24.7625,-43.8256,-68.2137,-68.2137 0|0:16:16,0,0,0:16:635:0,0,0:0,0,0:0,-4.81648,-57.4879,-4.81648,-57.4879,-57.4879,-4.81648,-57.4879,-57.4879,-57.4879 dDocent_Contig_10570 64 . A T 112.149 . AB=0;ABP=0;AC=2;AF=0.2;AN=10;AO=5;CIGAR=1X;DP=85;DPB=85;DPRA=1.46512;EPP=13.8677;EPPR=176.728;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=190;QR=3134;RO=80;RPL=5;RPP=13.8677;RPPR=176.728;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=80;SRP=176.728;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:11:11,0:11:442:0:0:0,-3.31133,-40.1358 0/0:39:37,2:37:1454:2:74:0,-4.71531,-124.09 0/0:27:27,0:27:1040:0:0:0,-8.12781,-93.8905 0/0:5:5,0:5:198:0:0:0,-1.50515,-18.197 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:116:-10.8168,-0.90309,0 dDocent_Contig_10571 16 . A T 30.2908 . AB=0.0957447;ABP=136.44;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=603;DPB=603;DPRA=0.67036;EPP=31.2394;EPPR=1275.51;GTI=0;LEN=1;MEANALT=1;MQM=54.6154;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0;PAIREDR=0.0779661;PAO=0;PQA=0;PQR=0;PRO=0;QA=520;QR=23353;RO=590;RPL=0;RPP=31.2394;RPPR=1284.18;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=589;SRP=1275.51;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:104:101,3:101:4039:3:120:0,-20.2261,-352.411 0/0:190:190,0:190:7439:0:0:0,-57.1957,-669.173 0/1:94:85,9:85:3394:9:364:-4.55155,0,-277.21 0/0:122:122,0:122:4837:0:0:0,-36.7257,-435.241 0/0:49:49,0:49:1960:0:0:0,-14.7505,-176.596 0/0:44:43,1:43:1684:1:36:0,-9.6867,-148.225 dDocent_Contig_10572 20 . C G 290.097 . AB=0.268293;ABP=22.1298;AC=5;AF=0.416667;AN=12;AO=13;CIGAR=1X;DP=86;DPB=86;DPRA=0.5;EPP=11.1951;EPPR=161.528;GTI=0;LEN=1;MEANALT=1;MQM=59.2308;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.538462;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=501;QR=2878;RO=73;RPL=0;RPP=31.2394;RPPR=161.528;RPR=13;RUN=1;SAF=10;SAP=11.1951;SAR=3;SRF=73;SRP=161.528;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:10:8,2:8:321:2:82:-4.76938,0,-26.2467 0/1:19:16,3:16:632:3:113:-4.81884,0,-51.4927 0/0:24:24,0:24:934:0:0:0,-7.22472,-84.3628 0/0:19:19,0:19:751:0:0:0,-5.71957,-67.909 1/1:2:0,2:0:0:2:75:-7.11085,-0.60206,0 0/1:12:6,6:6:240:6:231:-17.5321,0,-18.3633 dDocent_Contig_10573 107 . N A 1393.76 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=49;CIGAR=1X;DP=49;DPB=49;DPRA=0;EPP=109.412;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=37.8776;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0.938776;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1653;QR=0;RO=0;RPL=0;RPP=109.412;RPPR=0;RPR=49;RUN=1;SAF=0;SAP=109.412;SAR=49;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:60:-3.7778,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:104:-9.39317,-0.90309,0 1/1:4:0,4:0:0:4:139:-7.17868,-1.20412,0 1/1:29:0,29:0:0:29:997:-87.2029,-8.72987,0 1/1:11:0,11:0:0:11:353:-31.1243,-3.31133,0 dDocent_Contig_10575 1 . N G 173.726 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=3.44459;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.6;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=0.6;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=185;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=3;SAP=3.44459;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.45862,-0.30103,0 1/1:3:0,3:0:0:3:115:-9.99904,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.43613,-0.30103,0 dDocent_Contig_10576 16 . A T 5073.04 . AB=0.222523;ABP=745.333;AC=6;AF=0.5;AN=12;AO=247;CIGAR=1X;DP=1110;DPB=1110;DPRA=0;EPP=539.364;EPPR=1872.65;GTI=0;LEN=1;MEANALT=1.33333;MQM=59.9028;MQMR=59.8757;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.315789;PAIREDR=0.569106;PAO=0;PQA=0;PQR=0;PRO=0;QA=9464;QR=33916;RO=861;RPL=0;RPP=539.364;RPPR=1872.65;RPR=247;RUN=1;SAF=247;SAP=539.364;SAR=0;SRF=861;SRP=1872.65;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:174:130,44:130:5131:44:1673:-98.4451,0,-409.309 0/1:253:214,38:214:8453:38:1473:-56.1213,0,-683.563 0/1:193:142,50:142:5631:50:1930:-115.728,0,-448.363 0/1:184:142,42:142:5569:42:1593:-88.2422,0,-445.695 0/1:162:129,33:129:5073:33:1279:-66.6262,0,-407.701 0/1:144:104,40:104:4059:40:1516:-93.3626,0,-321.886 dDocent_Contig_10577 32 . C T 102.534 . AB=0.238095;ABP=15.5221;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=111;DPB=111;DPRA=0.85;EPP=16.0391;EPPR=231.015;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=0.5;PAIREDR=0.8;PAO=0;PQA=0;PQR=0;PRO=0;QA=237;QR=4206;RO=105;RPL=0;RPP=16.0391;RPPR=231.015;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=105;SRP=231.015;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:11:10,1:10:400:1:39:-0.585235,0,-33.0446 0/0:23:23,0:23:922:0:0:0,-6.92369,-83.2836 0/0:15:15,0:15:608:0:0:0,-4.51545,-55.0577 0/1:10:6,4:6:244:4:160:-11.7735,0,-19.3285 0/0:30:29,1:29:1147:1:38:0,-5.23363,-99.7017 0/0:22:22,0:22:885:0:0:0,-6.62266,-79.9575 dDocent_Contig_10578 15 . G A 2990.35 . AB=0.628931;ABP=25.9678;AC=6;AF=0.5;AN=12;AO=100;CIGAR=1X;DP=159;DPB=159;DPRA=0;EPP=220.158;EPPR=131.127;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.64;PAIREDR=0.711864;PAO=0;PQA=0;PQR=0;PRO=0;QA=3957;QR=2327;RO=59;RPL=0;RPP=220.158;RPPR=131.127;RPR=100;RUN=1;SAF=100;SAP=220.158;SAR=0;SRF=59;SRP=131.127;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:12,16:12:470:16:631:-48.6972,0,-34.2186 0/1:30:13,17:13:496:17:673:-51.8719,0,-35.9461 0/1:17:7,10:7:279:10:383:-29.7031,0,-20.3633 0/1:24:6,18:6:235:18:710:-57.0032,0,-14.2945 0/1:23:8,15:8:322:15:605:-47.8654,0,-22.4242 0/1:37:13,24:13:525:24:955:-75.1164,0,-36.4595 dDocent_Contig_10579 1 . N G 110.033 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=118;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:118:-11.0027,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10580 29 . A C 548.481 . AB=0.245283;ABP=62.7463;AC=5;AF=0.416667;AN=12;AO=26;CIGAR=1X;DP=130;DPB=130;DPRA=0.883333;EPP=59.4686;EPPR=228.843;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.730769;PAIREDR=0.817308;PAO=0;PQA=0;PQR=0;PRO=0;QA=1033;QR=4115;RO=104;RPL=0;RPP=59.4686;RPPR=228.843;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=104;SRP=228.843;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:5,7:5:200:7:284:-22.3214,0,-14.767 0/1:21:18,3:18:717:3:123:-5.14316,0,-58.5325 0/1:22:20,2:20:788:2:79:-0.874584,0,-64.6139 0/1:25:20,5:20:799:5:191:-10.0261,0,-64.6997 0/1:26:17,9:17:677:9:356:-24.5739,0,-53.4303 0/0:24:24,0:24:934:0:0:0,-7.22472,-84.3575 dDocent_Contig_10581 22 . A C 813.457 . AB=0.0784314;ABP=160.463;AC=0;AF=0;AN=12;AO=8;CIGAR=1X3M1X;DP=391;DPB=391;DPRA=0.554348;EPP=20.3821;EPPR=715.253;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.954268;PAO=0;PQA=0;PQR=0;PRO=0;QA=312;QR=12897;RO=328;RPL=0;RPP=20.3821;RPPR=715.253;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=328;SRP=715.253;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:42:38,0,4:38:1505:0,4:0,124:0,-11.4391,-135.386,-1.17856,-125.443,-124.239 0|0:68:41,2,25:41:1621:2,25:79,873:-58.6179,-64.4558,-197.275,0,-126.892,-125.867 0|0:13:8,0,5:8:320:0,5:0,183:-12.9115,-15.3198,-41.7001,0,-26.7591,-25.254 0|0:34:21,6,7:21:840:6,7:233,261:-15.0376,-2.20851,-69.6168,0,-50.0623,-67.0961 0|0:120:114,0,5:114:4453:0,5:0,182:0,-34.3174,-400.442,-19.2243,-385.578,-384.073 0|0:114:106,0,8:106:4158:0,8:0,279:0,-31.9092,-373.878,-8.87555,-351.196,-348.788 dDocent_Contig_10582 42 . G T 128.926 . AB=0.545455;ABP=3.99733;AC=4;AF=0.333333;AN=12;AO=33;CIGAR=1X;DP=73;DPB=73;DPRA=0;EPP=74.6689;EPPR=89.8692;GTI=0;LEN=1;MEANALT=1;MQM=13;MQMR=13.675;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1256;QR=1547;RO=40;RPL=0;RPP=74.6689;RPPR=89.8692;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=40;SRP=89.8692;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:17:8,9:8:315:9:360:-5.5349,0,-6.59567 0/1:12:7,5:7:274:5:183:-2.35151,0,-4.69859 0/1:7:4,3:4:151:3:118:-1.53004,0,-2.69544 0/0:9:7,2:7:283:2:72:0,-0.244154,-5.84995 0/1:19:6,13:6:225:13:483:-9.57145,0,-1.41786 0/0:9:8,1:8:299:1:40:0,-1.41009,-8.16061 dDocent_Contig_10583 53 . G A 284.095 . AB=0.164062;ABP=128.481;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1X;DP=330;DPB=330;DPRA=0.864407;EPP=52.9542;EPPR=669.652;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.173913;PAIREDR=0.530945;PAO=0;PQA=0;PQR=0;PRO=0;QA=847;QR=11305;RO=307;RPL=14;RPP=5.3706;RPPR=14.9003;RPR=9;RUN=1;SAF=14;SAP=5.3706;SAR=9;SRF=174;SRP=14.9003;SRR=133;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:63:52,11:52:1894:11:396:-17.0097,0,-151.731 0/1:65:55,10:55:2031:10:376:-14.6214,0,-163.44 0/0:25:23,2:23:875:2:75:0,-0.406157,-71.9418 0/0:47:47,0:47:1697:0:0:0,-14.1484,-152.974 0/0:75:75,0:75:2781:0:0:0,-22.5772,-250.462 0/0:55:55,0:55:2027:0:0:0,-16.5566,-182.656 dDocent_Contig_10584 15 . T C 604.05 . AB=0;ABP=0;AC=2;AF=0.2;AN=10;AO=17;CIGAR=1X;DP=169;DPB=169;DPRA=0.447368;EPP=39.9253;EPPR=333.074;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=663;QR=6058;RO=152;RPL=0;RPP=39.9253;RPPR=333.074;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=152;SRP=333.074;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:55:55,0:55:2203:0:0:0,-16.5566,-198.439 0/0:30:30,0:30:1170:0:0:0,-9.0309,-105.583 0/0:46:46,0:46:1838:0:0:0,-13.8474,-165.621 0/0:21:21,0:21:847:0:0:0,-6.32163,-76.5431 1/1:17:0,17:0:0:17:663:-60.0071,-5.11751,0 ./.:.:.:.:.:.:.:. dDocent_Contig_10585 41 . G A 966.416 . AB=0.22561;ABP=110.26;AC=4;AF=0.333333;AN=12;AO=44;CIGAR=1X;DP=203;DPB=203;DPRA=5.34375;EPP=98.5551;EPPR=348.274;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1647;QR=6071;RO=159;RPL=0;RPP=98.5551;RPPR=348.274;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=159;SRP=348.274;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:72:59,13:59:2228:13:481:-21.9517,0,-179.056 0/1:92:68,24:68:2583:24:898:-53.4291,0,-204.943 1/1:7:0,7:0:0:7:268:-24.4826,-2.10721,0 0/0:22:22,0:22:864:0:0:0,-6.62266,-78.0732 0/0:3:3,0:3:117:0:0:0,-0.90309,-10.9098 0/0:7:7,0:7:279:0:0:0,-2.10721,-25.4815 dDocent_Contig_10586 12 . G C 99.0525 . AB=0.2;ABP=22.5536;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=197;DPB=197;DPRA=0.644295;EPP=16.0391;EPPR=417.762;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.82199;PAO=0;PQA=0;PQR=0;PRO=0;QA=244;QR=7616;RO=191;RPL=0;RPP=16.0391;RPPR=417.762;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=191;SRP=417.762;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:20,5:20:806:5:203:-11.1271,0,-65.329 0/0:41:41,0:41:1605:0:0:0,-12.3422,-144.679 0/0:23:22,1:22:894:1:41:0,-2.82912,-76.6701 0/0:44:44,0:44:1749:0:0:0,-13.2453,-157.625 0/0:25:25,0:25:985:0:0:0,-7.52575,-88.9396 0/0:39:39,0:39:1577:0:0:0,-11.7402,-142.162 dDocent_Contig_10587 16 . C T 1992.52 . AB=0.336364;ABP=28.5942;AC=5;AF=0.5;AN=10;AO=66;CIGAR=1X;DP=163;DPB=163;DPRA=1.44792;EPP=146.327;EPPR=213.643;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2626;QR=3869;RO=97;RPL=0;RPP=146.327;RPPR=213.643;RPR=66;RUN=1;SAF=66;SAP=146.327;SAR=0;SRF=97;SRP=213.643;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:18,12:18:729:12:486:-35.0605,0,-56.9038 0/1:48:38,10:38:1489:10:407:-22.5412,0,-119.805 0/1:32:17,15:17:683:15:593:-44.0748,0,-52.1678 0/0:24:24,0:24:968:0:0:0,-7.22472,-87.4196 ./.:.:.:.:.:.:.:. 1/1:29:0,29:0:0:29:1140:-102.876,-8.72987,0 dDocent_Contig_10588 7 . T C 118.8 . AB=0.155172;ABP=62.913;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X1M1X;DP=268;DPB=268;DPRA=1.62162;EPP=29.068;EPPR=556.736;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.984314;PAO=0;PQA=0;PQR=0;PRO=0;QA=450;QR=9553;RO=255;RPL=0;RPP=29.068;RPPR=556.736;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=255;SRP=556.736;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:33:33,0:33:1244:0:0:0,-9.93399,-112.255 0|1:58:49,9:49:1845:9:339:-13.4029,0,-148.846 0|0:24:24,0:24:882:0:0:0,-7.22472,-79.696 0|0:62:59,3:59:2218:3:111:0,-8.31063,-189.499 0|0:55:55,0:55:2062:0:0:0,-16.5566,-185.825 0|0:36:35,0:35:1302:0:0:0,-10.536,-117.125 dDocent_Contig_10589 187 . A G 592.381 . AB=0.268817;ABP=46.1829;AC=3;AF=0.375;AN=8;AO=25;CIGAR=1X;DP=111;DPB=111;DPRA=1.72222;EPP=57.2971;EPPR=189.757;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.976744;PAO=0;PQA=0;PQR=0;PRO=0;QA=1017;QR=3301;RO=86;RPL=25;RPP=57.2971;RPPR=189.757;RPR=0;RUN=1;SAF=0;SAP=57.2971;SAR=25;SRF=0;SRP=189.757;SRR=86;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:673:0:0:0,-5.41854,-60.8959 0/1:20:17,3:17:665:3:121:-5.25939,0,-54.1602 0/1:43:31,12:31:1192:12:490:-31.5068,0,-94.6183 0/1:30:20,10:20:771:10:406:-27.8697,0,-60.6822 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10590 17 . T C 102.627 . AB=0.148936;ABP=53.3238;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=228;DPB=228;DPRA=1.5618;EPP=29.068;EPPR=472.048;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=0.847222;PAO=0;PQA=0;PQR=0;PRO=0;QA=484;QR=8501;RO=216;RPL=0;RPP=29.068;RPPR=472.048;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=216;SRP=472.048;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:920:0:0:0,-6.92369,-83.1072 0/0:45:45,0:45:1767:0:0:0,-13.5463,-159.252 0/0:52:50,2:50:1939:2:77:0,-8.34473,-167.417 0/0:40:37,3:37:1471:3:123:0,-0.576411,-121.178 0/0:21:21,0:21:839:0:0:0,-6.32163,-75.8227 0/1:47:40,7:40:1565:7:284:-11.7854,0,-126.93 dDocent_Contig_10591 54 . A T 422.26 . AB=0.203883;ABP=81.4574;AC=2;AF=0.166667;AN=12;AO=27;CIGAR=1X;DP=406;DPB=406;DPRA=1.25;EPP=61.6401;EPPR=825.998;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.592593;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1081;QR=14814;RO=379;RPL=27;RPP=61.6401;RPPR=825.998;RPR=0;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=379;SRP=825.998;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:43:39,4:39:1483:4:164:-2.20561,0,-120.764 0/0:55:55,0:55:2149:0:0:0,-16.5566,-193.605 0/0:87:82,5:82:3208:5:200:0,-7.81007,-270.418 0/1:60:43,17:43:1696:17:677:-43.1993,0,-134.811 0/0:100:99,1:99:3920:1:40:0,-26.1073,-348.824 0/0:61:61,0:61:2358:0:0:0,-18.3628,-212.401 dDocent_Contig_10592 30 . T G 1047.71 . AB=0.266272;ABP=83.2006;AC=4;AF=0.333333;AN=12;AO=45;CIGAR=1X;DP=245;DPB=245;DPRA=1.11184;EPP=100.727;EPPR=437.305;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.97;PAO=0;PQA=0;PQR=0;PRO=0;QA=1794;QR=8049;RO=200;RPL=0;RPP=100.727;RPPR=437.305;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=200;SRP=437.305;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:31,6:31:1244:6:238:-10.6557,0,-101.09 0/1:58:36,22:36:1454:22:888:-62.7674,0,-113.645 0/1:31:19,12:19:763:12:463:-32.6786,0,-59.6552 0/1:43:38,5:38:1533:5:205:-5.89072,0,-125.263 0/0:44:44,0:44:1758:0:0:0,-13.2453,-158.436 0/0:32:32,0:32:1297:0:0:0,-9.63296,-116.991 dDocent_Contig_10593 9 . G T 33.7883 . AB=0.125;ABP=42.0968;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=239;DPB=239;DPRA=0.772947;EPP=11.6962;EPPR=487.581;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.429787;PAO=0;PQA=0;PQR=0;PRO=0;QA=154;QR=8899;RO=235;RPL=0;RPP=11.6962;RPPR=513.306;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=232;SRP=487.581;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:28,4:28:1070:4:154:-4.6005,0,-86.9734 0/0:58:58,0:58:2196:0:0:0,-17.4597,-197.869 0/0:35:35,0:35:1327:0:0:0,-10.536,-119.712 0/0:76:76,0:76:2872:0:0:0,-22.8783,-258.659 0/0:16:16,0:16:602:0:0:0,-4.81648,-54.5162 0/0:22:22,0:22:832:0:0:0,-6.62266,-75.1998 dDocent_Contig_10594 14 . G T 538.81 . AB=0.128834;ABP=588.149;AC=3;AF=0.25;AN=12;AO=94;CIGAR=1X;DP=968;DPB=968;DPRA=0;EPP=207.129;EPPR=1894.36;GTI=0;LEN=1;MEANALT=1.5;MQM=42.2872;MQMR=54.0551;NS=6;NUMALT=1;ODDS=0;PAIRED=0.106383;PAIREDR=0.0838117;PAO=0;PQA=0;PQR=0;PRO=0;QA=3689;QR=34594;RO=871;RPL=0;RPP=207.129;RPPR=1894.36;RPR=94;RUN=1;SAF=94;SAP=207.129;SAR=0;SRF=871;SRP=1894.36;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:114:98,16:98:3891:16:620:-15.5044,0,-314.257 0/1:237:203,33:203:8025:33:1289:-39.644,0,-646.815 0/0:142:134,7:134:5310:7:277:0,-18.9999,-451.167 0/0:194:179,14:179:7134:14:562:0,-11.1283,-591.098 0/1:138:124,14:124:4920:14:553:-3.9537,0,-398.244 0/0:143:133,10:133:5314:10:388:0,-9.64534,-440.631 dDocent_Contig_10595 98 . N A 132.882 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=6;CIGAR=2X7I6X;DP=6;DPB=11.25;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=29.6667;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=225;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:2:0,2:0:0:2:73:-2.65481,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:75:-2.84549,-0.60206,0 .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:77:-7.30914,-0.60206,0 dDocent_Contig_10597 90 . T C 64.6073 . AB=0.12931;ABP=141.46;AC=3;AF=0.25;AN=12;AO=22;CIGAR=1X;DP=226;DPB=226;DPRA=1.47407;EPP=50.7827;EPPR=445.991;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.772727;PAIREDR=0.897059;PAO=0;PQA=0;PQR=0;PRO=0;QA=709;QR=6844;RO=204;RPL=22;RPP=50.7827;RPPR=445.991;RPR=0;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=204;SRP=445.991;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:27,3:27:899:3:105:-0.765262,0,-72.1848 0/1:48:41,7:41:1381:7:235:-7.02964,0,-110.137 0/0:40:36,4:36:1227:4:119:0,-1.03631,-99.7277 0/1:38:33,5:33:1110:5:153:-2.63227,0,-88.7644 0/0:27:27,0:27:899:0:0:0,-8.12781,-81.2149 0/0:43:40,3:40:1328:3:97:0,-3.89372,-110.76 dDocent_Contig_10598 16 . A C 113.247 . AB=0.230769;ABP=19.3799;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=1X;DP=116;DPB=116;DPRA=0.681159;EPP=18.2106;EPPR=239.701;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=281;QR=4301;RO=109;RPL=0;RPP=18.2106;RPPR=239.701;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=109;SRP=239.701;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:757:0:0:0,-5.71957,-68.4456 0/0:37:37,0:37:1453:0:0:0,-11.1381,-131.024 0/0:21:20,1:20:789:1:41:0,-2.22706,-67.227 0/1:15:12,3:12:472:3:117:-6.39313,0,-38.313 0/1:11:8,3:8:316:3:123:-8.15346,0,-25.492 0/0:13:13,0:13:514:0:0:0,-3.91339,-46.6063 dDocent_Contig_10599 98 . N A 686.201 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=28;CIGAR=1X;DP=28;DPB=28;DPRA=0;EPP=63.8115;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=58.2857;MQMR=0;NS=4;NUMALT=1;ODDS=3.38813e-21;PAIRED=0.964286;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=750;QR=0;RO=0;RPL=28;RPP=63.8115;RPPR=0;RPR=0;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:11:0,11:0:0:11:326:-29.6295,-3.31133,0 1/1:4:0,4:0:0:4:83:-7.67635,-1.20412,0 1/1:6:0,6:0:0:6:168:-15.3964,-1.80618,0 1/1:7:0,7:0:0:7:173:-15.3157,-2.10721,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10600 72 . C T 173.475 . AB=0.266667;ABP=17.1973;AC=0;AF=0;AN=12;AO=8;CIGAR=8M1X3M;DP=338;DPB=329.667;DPRA=0.487013;EPP=20.3821;EPPR=689.196;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=268;QR=10353;RO=316;RPL=8;RPP=20.3821;RPPR=689.196;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=316;SRP=689.196;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:30:12,10,8:12:392:10,8:280,268:-18.5431,0,-28.6429,-0.427277,-9.94614,-29.7026 0|0:19:19,0,0:19:629:0,0:0,0:0,-5.71957,-56.9248,-5.71957,-56.9248,-56.9248 0|0:57:57,0,0:57:1870:0,0:0,0:0,-17.1587,-168.581,-17.1587,-168.581,-168.581 0|0:26:26,0,0:26:867:0,0:0,0:0,-7.82678,-78.3405,-7.82678,-78.3405,-78.3405 0|0:110:108,0,0:108:3536:0,0:0,0:0,-32.5112,-318.404,-32.5112,-318.404,-318.404 0|0:96:94,0,0:94:3059:0,0:0,0:0,-28.2968,-275.213,-28.2968,-275.213,-275.213 dDocent_Contig_10601 54 . C T 51.0671 . AB=0.142857;ABP=34.0313;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=139;DPB=139;DPRA=1.26126;EPP=11.6962;EPPR=293.988;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.5;PAIREDR=0.895522;PAO=0;PQA=0;PQR=0;PRO=0;QA=163;QR=5326;RO=134;RPL=4;RPP=11.6962;RPPR=293.988;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=134;SRP=293.988;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:479:0:0:0,-3.61236,-43.4613 0/0:42:42,0:42:1665:0:0:0,-12.6433,-150.075 0/0:31:31,0:31:1236:0:0:0,-9.33193,-111.511 0/1:28:24,4:24:957:4:163:-6.62959,0,-78.0004 0/0:18:17,0:17:672:0:0:0,-5.11751,-60.4024 0/0:8:8,0:8:317:0:0:0,-2.40824,-28.8944 dDocent_Contig_10602 20 . G A 1253.07 . AB=0.184492;ABP=326.386;AC=4;AF=0.333333;AN=12;AO=69;CIGAR=1X;DP=594;DPB=594;DPRA=0.85;EPP=152.842;EPPR=1143.03;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.971014;PAIREDR=0.973333;PAO=0;PQA=0;PQR=0;PRO=0;QA=2709;QR=20786;RO=525;RPL=0;RPP=152.842;RPPR=1143.03;RPR=69;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=525;SRP=1143.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:102:75,27:75:2943:27:1060:-64.9847,0,-234.279 0/1:95:81,14:81:3165:14:553:-21.5134,0,-256.353 0/1:85:69,16:69:2743:16:635:-31.8915,0,-221.401 0/1:92:80,12:80:3174:12:461:-14.1396,0,-258.048 0/0:106:106,0:106:4215:0:0:0,-31.9092,-379.324 0/0:114:114,0:114:4546:0:0:0,-34.3174,-409.074 dDocent_Contig_10603 70 . G A 45.8547 . AB=0.147059;ABP=39.7976;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=104;DPB=104;DPRA=1.12245;EPP=16.0391;EPPR=215.815;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=220;QR=3643;RO=98;RPL=6;RPP=16.0391;RPPR=215.815;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=98;SRP=215.815;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:14:12,2:12:459:2:71:-2.52666,0,-37.4455 0/0:26:26,0:26:966:0:0:0,-7.82678,-87.2478 0/1:20:17,3:17:636:3:121:-5.2596,0,-51.548 0/0:13:13,0:13:485:0:0:0,-3.91339,-43.993 0/0:10:10,0:10:363:0:0:0,-3.0103,-33.0111 0/0:21:20,1:20:734:1:28:0,-3.5219,-63.5833 dDocent_Contig_10606 63 . C T 35.0016 . AB=0.130435;ABP=57.5803;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=230;DPB=230;DPRA=1.25;EPP=16.0391;EPPR=487.249;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.502242;PAO=0;PQA=0;PQR=0;PRO=0;QA=206;QR=8383;RO=223;RPL=3;RPP=3.0103;RPPR=46.7221;RPR=3;RUN=1;SAF=3;SAP=3.0103;SAR=3;SRF=145;SRP=46.7221;SRR=78;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1141:0:0:0,-9.0309,-102.979 0/0:48:47,0:47:1763:0:0:0,-14.1484,-158.502 0/0:49:49,0:49:1857:0:0:0,-14.7505,-167.362 0/1:46:40,6:40:1523:6:206:-5.0229,0,-123.467 0/0:23:23,0:23:851:0:0:0,-6.92369,-76.8963 0/0:34:34,0:34:1248:0:0:0,-10.235,-112.592 dDocent_Contig_10607 23 . C T 2851.67 . AB=0.0567376;ABP=243.643;AC=0;AF=0;AN=12;AO=8;CIGAR=1X2M1X;DP=419;DPB=419;DPRA=1.06818;EPP=20.3821;EPPR=652.281;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=312;QR=11853;RO=299;RPL=0;RPP=20.3821;RPPR=652.281;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=299;SRP=652.281;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:70:49,0,20:49:1961:0,20:0,809:-52.1544,-66.9049,-228.452,0,-161.749,-155.728 0|0:52:31,0,21:31:1224:0,21:0,837:-59.9901,-69.322,-170.033,0,-101.108,-94.7865 0|0:84:58,2,23:58:2304:2,23:71,918:-58.1673,-69.8477,-258.913,0,-183.913,-182.771 0|0:57:24,6,27:24:950:6,27:241,1089:-82.5406,-69.9061,-146.279,0,-58.3176,-70.0504 0|0:90:71,0,19:71:2810:0,19:0,759:-41.5366,-62.9097,-294.165,0,-231.653,-225.934 0|0:66:66,0,0:66:2604:0,0:0,0:0,-19.868,-234.496,-19.868,-234.496,-234.496 dDocent_Contig_10608 10 . A G 383.754 . AB=0.275862;ABP=28.3192;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=113;DPB=113;DPRA=1.97368;EPP=39.9253;EPPR=211.472;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.705882;PAIREDR=0.65625;PAO=0;PQA=0;PQR=0;PRO=0;QA=689;QR=3767;RO=96;RPL=0;RPP=39.9253;RPPR=211.472;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=96;SRP=211.472;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:663:0:0:0,-5.11751,-59.9977 0/0:17:16,1:16:639:1:41:0,-1.02294,-53.7513 0/0:7:7,0:7:267:0:0:0,-2.10721,-24.3901 0/0:14:14,0:14:553:0:0:0,-4.21442,-50.1125 0/1:30:24,6:24:941:6:241:-13.0354,0,-75.9628 0/1:28:18,10:18:704:10:407:-28.5618,0,-55.2584 dDocent_Contig_10610 13 . T C 48.2441 . AB=0.176471;ABP=18.4661;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=176;DPB=176;DPRA=0.687023;EPP=11.6962;EPPR=376.504;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.459302;PAO=0;PQA=0;PQR=0;PRO=0;QA=164;QR=6858;RO=172;RPL=0;RPP=11.6962;RPPR=376.504;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=172;SRP=376.504;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:27,1:27:1073:1:41:0,-4.33427,-92.7543 0/0:29:29,0:29:1170:0:0:0,-8.72987,-105.576 0/0:16:16,0:16:640:0:0:0,-4.81648,-57.9329 0/0:34:34,0:34:1359:0:0:0,-10.235,-122.566 0/1:17:14,3:14:551:3:123:-6.34728,0,-44.8126 0/0:52:52,0:52:2065:0:0:0,-15.6536,-186.027 dDocent_Contig_10611 54 . A T 189.965 . AB=0;ABP=0;AC=2;AF=0.2;AN=10;AO=6;CIGAR=1X2M1X;DP=113;DPB=113;DPRA=0.224299;EPP=3.0103;EPPR=233.186;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=1.0842e-19;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=203;QR=4157;RO=106;RPL=6;RPP=16.0391;RPPR=233.186;RPR=0;RUN=1;SAF=3;SAP=3.0103;SAR=3;SRF=106;SRP=233.186;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:11:10,0:10:393:0:0:0,-3.0103,-35.6283 0|0:70:70,0:70:2745:0:0:0,-21.0721,-247.197 0|0:11:11,0:11:426:0:0:0,-3.31133,-38.6901 0|0:15:15,0:15:593:0:0:0,-4.51545,-53.7103 .:.:.:.:.:.:.:. 1|1:6:0,6:0:0:6:203:-18.5985,-1.80618,0 dDocent_Contig_10612 53 . C T 103.78 . AB=0;ABP=0;AC=2;AF=0.2;AN=10;AO=3;CIGAR=1X;DP=679;DPB=679;DPRA=0.0177515;EPP=9.52472;EPPR=1457.9;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998507;PAO=0;PQA=0;PQR=0;PRO=0;QA=107;QR=26339;RO=670;RPL=3;RPP=9.52472;RPPR=1457.9;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=670;SRP=1457.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:254:251,0:251:9818:0:0:0,-75.5585,-882.681 0/0:212:212,0:212:8312:0:0:0,-63.8184,-747.66 0/0:61:59,0:59:2347:0:0:0,-17.7608,-211.23 0/0:149:148,0:148:5862:0:0:0,-44.5524,-526.979 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:107:-9.97994,-0.90309,0 dDocent_Contig_10613 112 . T A 41.9736 . AB=0.166667;ABP=26.1727;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=113;DPB=113;DPRA=1.34831;EPP=11.6962;EPPR=237.529;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=0;PAIREDR=0.685185;PAO=0;PQA=0;PQR=0;PRO=0;QA=140;QR=3725;RO=108;RPL=0;RPP=11.6962;RPPR=237.529;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=237.529;SRR=108;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:835:0:0:0,-7.22472,-75.469 0/0:23:22,0:22:747:0:0:0,-6.62266,-67.1955 0/0:12:12,0:12:416:0:0:0,-3.61236,-37.7726 0/1:24:20,4:20:685:4:140:-5.72021,0,-54.7459 0/0:12:12,0:12:414:0:0:0,-3.61236,-37.5913 0/0:18:18,0:18:628:0:0:0,-5.41854,-56.8471 dDocent_Contig_10615 48 . A T 233.646 . AB=0.19697;ABP=55.6521;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=222;DPB=222;DPRA=0.846154;EPP=31.2394;EPPR=454.677;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.778846;PAO=0;PQA=0;PQR=0;PRO=0;QA=508;QR=8228;RO=208;RPL=0;RPP=31.2394;RPPR=454.677;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=208;SRP=454.677;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:1087:0:0:0,-8.72987,-98.1048 0/0:55:55,0:55:2185:0:0:0,-16.5566,-196.824 0/0:34:33,0:33:1323:0:0:0,-9.93399,-119.039 0/0:38:38,0:38:1503:0:0:0,-11.4391,-135.516 0/1:27:23,4:23:921:4:160:-6.6562,0,-75.0679 0/1:39:30,9:30:1209:9:348:-19.9303,0,-97.3433 dDocent_Contig_10616 17 . A C 1674.37 . AB=0.103239;ABP=1353.93;AC=2;AF=0.166667;AN=12;AO=113;CIGAR=2X2M1X;DP=1163;DPB=1149.2;DPRA=0;EPP=248.387;EPPR=1863.96;GTI=0;LEN=1;MEANALT=5;MQM=41;MQMR=59.4784;NS=6;NUMALT=5;ODDS=0;PAIRED=1;PAIREDR=0.988331;PAO=0;PQA=0;PQR=0;PRO=0;QA=4480;QR=33648;RO=857;RPL=0;RPP=248.387;RPPR=1863.96;RPR=113;RUN=1;SAF=113;SAP=248.387;SAR=0;SRF=857;SRP=1863.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:171:129,21,6,10,1,3:129:5072:21,6,10,1,3:838,242,370,30,120:-25.4997,0,-407.918,-44.3812,-394.293,-456.814,-34.0712,-383.979,-428.36,-445.296,-61.9357,-411.842,-456.223,-445.909,-475.868,-54.4453,-404.354,-448.735,-438.421,-466.284,-467.779 0|1:310:191,55,19,5,27,11:191:7468:55,19,5,27,11:2166,760,202,1074,448:-109.064,0,-596.354,-103.969,-550.321,-711.17,-149.907,-596.257,-700.236,-761.321,-78.134,-524.487,-628.466,-674.403,-682.928,-129.601,-575.952,-679.931,-725.868,-654.097,-739.21 0|0:153:116,5,4,4,6,15:116:4541:5,4,4,6,15:195,155,162,237,602:-14.6236,-34.59,-405.015,-36.8135,-393.79,-407.543,-36.1834,-393.162,-395.388,-406.914,-30.0441,-387.022,-389.248,-388.619,-400.172,0,-356.981,-359.208,-358.579,-352.439,-367.422 0|0:183:128,16,16,3,12,8:128:5037:16,16,3,12,8:643,622,123,482,303:-12.57,-1.88995,-408.986,0,-362.701,-407.1,-40.9483,-403.65,-401.764,-451.962,-11.3802,-374.084,-372.198,-413.147,-419.687,-26.2655,-388.965,-387.079,-428.028,-398.462,-435.772 0|0:175:150,11,6,0,0,8:150:5908:11,6,0,0,8:439,240,0,0,327:0,-11.5041,-494.186,-25.3841,-477.729,-509.585,-45.1545,-497.497,-511.392,-531.16,-45.1545,-497.497,-511.392,-531.16,-531.16,-18.1627,-470.512,-484.407,-504.175,-504.175,-501.767 0|0:171:143,5,18,0,0,5:143:5622:5,18,0,0,5:199,705,0,0,204:-14.9007,-42.6521,-503.205,0,-446.763,-456.643,-57.948,-504.71,-462.062,-520.009,-57.948,-504.71,-462.062,-520.009,-520.009,-41.113,-487.878,-445.23,-503.177,-503.177,-501.672 dDocent_Contig_10617 26 . A G 64.6903 . AB=0.3;ABP=6.48466;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=96;DPB=96;DPRA=0.581395;EPP=9.52472;EPPR=204.957;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=118;QR=3731;RO=93;RPL=0;RPP=9.52472;RPPR=204.957;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=93;SRP=204.957;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:570:0:0:0,-4.21442,-51.6422 0/0:12:12,0:12:465:0:0:0,-3.61236,-42.1928 0/0:40:40,0:40:1609:0:0:0,-12.0412,-145.043 0/0:11:11,0:11:446:0:0:0,-3.31133,-40.4962 0/0:9:9,0:9:356:0:0:0,-2.70927,-32.4008 0/1:10:7,3:7:285:3:118:-7.9919,0,-23.0141 dDocent_Contig_10619 7 . T C 122.042 . AB=0.139785;ABP=107.825;AC=4;AF=0.333333;AN=12;AO=13;CIGAR=1X;DP=158;DPB=158;DPRA=0.715385;EPP=31.2394;EPPR=317.874;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.846154;PAIREDR=0.668966;PAO=0;PQA=0;PQR=0;PRO=0;QA=503;QR=5540;RO=145;RPL=0;RPP=31.2394;RPPR=317.874;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=145;SRP=317.874;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:15:11,4:11:421:4:156:-9.90184,0,-33.7271 0/1:44:39,5:39:1482:5:191:-4.3132,0,-120.406 0/1:14:12,2:12:457:2:78:-3.18905,0,-37.2644 0/1:20:18,2:18:690:2:78:-1.38287,0,-56.4122 0/0:23:23,0:23:881:0:0:0,-6.92369,-79.6107 0/0:42:42,0:42:1609:0:0:0,-12.6433,-145.075 dDocent_Contig_10622 20 . A T 254.211 . AB=0.2;ABP=53.8228;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=4M1X1M;DP=344;DPB=345.333;DPRA=1.07229;EPP=39.9253;EPPR=702.224;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.823529;PAIREDR=0.574534;PAO=0;PQA=0;PQR=0;PRO=0;QA=675;QR=12614;RO=322;RPL=0;RPP=39.9253;RPPR=702.224;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=322;SRP=702.224;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:40:40,0,0:40:1550:0,0:0,0:0,-12.0412,-139.758,-12.0412,-139.758,-139.758 0|0:47:46,0,1:46:1790:0,1:0,39:0,-13.8474,-160.942,-10.2518,-157.736,-157.435 0|0:66:63,0,3:63:2481:0,3:0,123:0,-18.9649,-223.05,-8.40319,-212.897,-211.993 0|1:65:52,0,13:52:2039:0,13:0,513:-26.9439,-42.5975,-210.272,0,-168.068,-164.155 0|0:56:53,3,0:53:2088:3,0:101,0:0,-7.43749,-178.701,-15.9546,-179.604,-187.781 0|0:70:68,1,0:68:2666:1,0:39,0:0,-17.2592,-236.208,-20.47,-236.509,-239.715 dDocent_Contig_10623 8 . G A 567.462 . AB=0.243478;ABP=68.7398;AC=4;AF=0.333333;AN=12;AO=28;CIGAR=1X;DP=139;DPB=139;DPRA=2.39583;EPP=63.8115;EPPR=244.044;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1069;QR=4239;RO=111;RPL=0;RPP=63.8115;RPPR=244.044;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=111;SRP=244.044;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:6:6,0:6:222:0:0:0,-1.80618,-20.3358 0/1:21:19,2:19:728:2:78:-1.08184,0,-59.529 0/1:46:30,16:30:1147:16:610:-41.389,0,-89.6807 0/1:27:20,7:20:765:7:270:-16.5377,0,-61.0509 0/0:18:18,0:18:694:0:0:0,-5.41854,-62.7937 0/1:21:18,3:18:683:3:111:-4.03199,0,-55.4811 dDocent_Contig_10624 159 . C T 2468.74 . AB=0.362869;ABP=41.7211;AC=7;AF=0.583333;AN=12;AO=91;CIGAR=1X;DP=242;DPB=242;DPRA=0;EPP=200.614;EPPR=330.903;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3612;QR=6001;RO=151;RPL=91;RPP=200.614;RPPR=330.903;RPR=0;RUN=1;SAF=0;SAP=200.614;SAR=91;SRF=0;SRP=330.903;SRR=151;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:58:39,19:39:1553:19:748:-50.1771,0,-122.552 0/1:57:31,26:31:1245:26:1041:-76.8238,0,-95.1602 0/1:79:52,27:52:2063:27:1056:-71.5436,0,-162.072 0/1:40:28,12:28:1114:12:485:-31.9608,0,-88.5018 1/1:5:0,5:0:0:5:201:-18.4705,-1.50515,0 0/1:3:1,2:1:26:2:81:-6.78264,0,-1.69674 dDocent_Contig_10625 31 . G A 1787.29 . AB=0.21466;ABP=138.085;AC=6;AF=0.5;AN=12;AO=74;CIGAR=1X;DP=333;DPB=333;DPRA=0;EPP=163.699;EPPR=552.393;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2887;QR=9890;RO=253;RPL=0;RPP=163.699;RPPR=552.393;RPR=74;RUN=1;SAF=74;SAP=163.699;SAR=0;SRF=253;SRP=552.393;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:58:45,11:45:1775:11:430:-21.8022,0,-142.713 0/0:114:105,5:105:4070:5:203:0,-14.8389,-347.667 0/1:51:45,6:45:1770:6:216:-4.42815,0,-144.168 0/1:66:53,13:53:2070:13:503:-25.747,0,-166.618 1/1:28:0,28:0:0:28:1094:-98.7438,-8.42884,0 0/1:16:5,11:5:205:11:441:-35.2291,0,-14.0185 dDocent_Contig_10626 1 . N G 1049.29 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=33;CIGAR=1X;DP=33;DPB=33;DPRA=0;EPP=74.6689;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=3.38813e-21;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1134;QR=0;RO=0;RPL=0;RPP=74.6689;RPPR=0;RPR=33;RUN=1;SAF=0;SAP=74.6689;SAR=33;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:8:0,8:0:0:8:277:-25.267,-2.40824,0 1/1:9:0,9:0:0:9:311:-28.3252,-2.70927,0 1/1:4:0,4:0:0:4:140:-12.9449,-1.20412,0 1/1:3:0,3:0:0:3:104:-9.70309,-0.90309,0 1/1:6:0,6:0:0:6:200:-18.3269,-1.80618,0 1/1:3:0,3:0:0:3:102:-9.5168,-0.90309,0 dDocent_Contig_10627 44 . T C 2741.37 . AB=0.524862;ABP=3.98206;AC=6;AF=0.5;AN=12;AO=95;CIGAR=1X;DP=181;DPB=181;DPRA=0;EPP=209.3;EPPR=181.172;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.568421;PAIREDR=0.639535;PAO=0;PQA=0;PQR=0;PRO=0;QA=3754;QR=3472;RO=86;RPL=0;RPP=209.3;RPPR=189.757;RPR=95;RUN=1;SAF=95;SAP=209.3;SAR=0;SRF=85;SRP=181.172;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:27:19,8:19:775:8:311:-20.2238,0,-61.9405 0/1:38:19,19:19:771:19:755:-56.8293,0,-58.27 0/1:31:11,20:11:443:20:794:-62.4456,0,-30.894 0/1:31:18,13:18:725:13:505:-36.453,0,-56.2439 0/1:25:10,15:10:407:15:593:-46.1804,0,-29.4646 0/1:29:9,20:9:351:20:796:-63.2265,0,-23.2152 dDocent_Contig_10628 15 . C A 535.947 . AB=0.252632;ABP=53.5027;AC=3;AF=0.25;AN=12;AO=24;CIGAR=1X;DP=202;DPB=202;DPRA=0.88785;EPP=55.1256;EPPR=387.361;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99435;PAO=0;PQA=0;PQR=0;PRO=0;QA=960;QR=7093;RO=177;RPL=0;RPP=55.1256;RPPR=387.361;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=177;SRP=387.361;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:15:13,2:13:531:2:81:-3.17028,0,-43.6209 0/1:36:32,4:32:1299:4:161:-4.03819,0,-106.334 0/1:44:25,18:25:989:18:718:-51.6026,0,-75.9665 0/0:25:25,0:25:1011:0:0:0,-7.52575,-91.2834 0/0:48:48,0:48:1916:0:0:0,-14.4494,-172.636 0/0:34:34,0:34:1347:0:0:0,-10.235,-121.487 dDocent_Contig_10630 9 . C T 424.057 . AB=0.25641;ABP=43.2104;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1X;DP=214;DPB=214;DPRA=1.09697;EPP=52.9542;EPPR=417.762;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.478261;PAIREDR=0.486911;PAO=0;PQA=0;PQR=0;PRO=0;QA=874;QR=7327;RO=191;RPL=0;RPP=52.9542;RPPR=417.762;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=191;SRP=417.762;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:31,1:31:1185:1:37:0,-5.93513,-103.246 0/0:37:36,1:36:1375:1:38:0,-7.34084,-120.231 0/0:33:33,0:33:1261:0:0:0,-9.93399,-113.78 0/0:34:33,1:33:1267:1:39:0,-6.33846,-110.426 0/1:52:43,9:43:1661:9:341:-15.3925,0,-134.097 0/1:26:15,11:15:578:11:419:-30.2351,0,-44.5355 dDocent_Contig_10631 14 . G C 111.427 . AB=0.142857;ABP=80.5629;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=241;DPB=241;DPRA=0.818713;EPP=24.725;EPPR=159.441;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.480519;PAO=0;PQA=0;PQR=0;PRO=0;QA=385;QR=8738;RO=231;RPL=0;RPP=24.725;RPPR=504.62;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=180;SRP=159.441;SRR=51;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:40,0:40:1493:0:0:0,-12.0412,-134.642 0/0:56:56,0:56:2090:0:0:0,-16.8577,-188.327 0/0:22:22,0:22:845:0:0:0,-6.62266,-76.3676 0/0:53:53,0:53:2021:0:0:0,-15.9546,-182.118 0/1:29:23,6:23:886:6:228:-12.1521,0,-71.3258 0/1:41:37,4:37:1403:4:157:-2.16566,0,-114.205 dDocent_Contig_10632 11 . A C 994.54 . AB=0.0391061;ABP=333.28;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X2M1X;DP=236;DPB=236;DPRA=2.13095;EPP=18.2106;EPPR=378.675;GTI=0;LEN=1;MEANALT=3.25;MQM=53.1429;MQMR=59.2775;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.959538;PAO=0;PQA=0;PQR=0;PRO=0;QA=279;QR=6614;RO=173;RPL=0;RPP=18.2106;RPPR=378.675;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=173;SRP=378.675;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:53:38,2,0,13:38:1415:2,0,13:80,0,510:-30.4915,-35.3623,-150.556,-41.9306,-151.158,-157.726,0,-109.217,-115.785,-111.872 0|0:60:39,2,0,18:39:1484:2,0,18:78,0,712:-37.6334,-42.978,-164.109,-49.3736,-164.712,-171.103,0,-115.308,-121.699,-116.281 0|0:36:22,0,0,14:22:852:0,0,14:0,0,527:-36.5476,-43.1702,-113.165,-43.1702,-113.165,-113.165,0,-70.3735,-70.3735,-66.1591 0|1:27:22,2,0,2:22:866:2,0,2:81,0,78:-0.0602973,0,-70.6952,-6.68296,-71.2972,-77.9521,-0.250939,-64.8853,-71.5403,-70.9382 0|0:21:20,0,1,0:20:768:0,1,0:0,40,0:0,-6.0206,-67.328,-2.32595,-64.0317,-63.7306,-6.0206,-67.328,-64.0317,-67.328 0|0:39:32,1,3,1:32:1229:1,3,1:40,122,40:-0.459397,-6.84651,-106.627,0,-96.8625,-99.2014,-6.7919,-103.632,-96.8087,-106.573 dDocent_Contig_10635 11 . A T 413.807 . AB=0.153846;ABP=138.31;AC=2;AF=0.25;AN=8;AO=21;CIGAR=2M2X2M2D2M9I5M;DP=187;DPB=219;DPRA=0;EPP=48.6112;EPPR=231.015;GTI=0;LEN=1;MEANALT=9;MQM=60;MQMR=60;NS=4;NUMALT=7;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=829;QR=4134;RO=105;RPL=0;RPP=48.6112;RPPR=231.015;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=105;SRP=231.015;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:41:27,0,3,0,0,3,0,2:27:1062:0,3,0,0,3,0,2:0,106,0,0,112,0,80:-1.04032,-9.16813,-96.5369,-0.543962,-87.9081,-87.005,-9.16813,-96.5369,-87.9081,-96.5369,-9.16813,-96.5369,-87.9081,-96.5369,-96.5369,0,-87.368,-78.7395,-87.368,-87.368,-86.4649,-9.16813,-96.5369,-87.9081,-96.5369,-96.5369,-87.368,-96.5369,-2.57477,-89.9461,-81.3174,-89.9461,-89.9461,-80.7773,-89.9461,-89.3441 0|1:65:30,4,0,0,11,0,0,0:30:1184:4,0,0,11,0,0,0:145,0,0,433,0,0,0:-26.5923,-23.7897,-120.01,-35.6232,-121.214,-133.049,-35.6232,-121.214,-133.049,-133.049,0,-85.593,-97.4277,-97.4277,-94.1163,-35.6232,-121.214,-133.049,-133.049,-97.4277,-133.049,-35.6232,-121.214,-133.049,-133.049,-97.4277,-133.049,-133.049,-35.6232,-121.214,-133.049,-133.049,-97.4277,-133.049,-133.049,-133.049 0|0:16:11,0,0,0,1,0,0,0:11:431:0,0,0,1,0,0,0:0,0,0,40,0,0,0:0,-3.31133,-38.755,-3.31133,-38.755,-38.755,-3.31133,-38.755,-38.755,-38.755,-0.0137674,-35.4594,-35.4594,-35.4594,-35.1583,-3.31133,-38.755,-38.755,-38.755,-35.4594,-38.755,-3.31133,-38.755,-38.755,-38.755,-35.4594,-38.755,-38.755,-3.31133,-38.755,-38.755,-38.755,-35.4594,-38.755,-38.755,-38.755 0|1:65:37,0,0,2,9,0,2,0:37:1457:0,0,2,9,0,2,0:0,0,78,356,0,75,0:-18.1702,-29.3083,-149.183,-29.3083,-149.183,-149.183,-22.8956,-142.772,-142.772,-142.17,0,-119.883,-119.883,-113.471,-117.174,-29.3083,-149.183,-149.183,-142.772,-119.883,-149.183,-23.165,-143.04,-143.04,-136.629,-113.74,-143.04,-142.438,-29.3083,-149.183,-149.183,-142.772,-119.883,-149.183,-143.04,-149.183 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_10636 15 . G T 1948.18 . AB=0.361386;ABP=36.7219;AC=5;AF=0.416667;AN=12;AO=74;CIGAR=1X;DP=226;DPB=226;DPRA=0;EPP=163.699;EPPR=333.074;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.283784;PAIREDR=0.335526;PAO=0;PQA=0;PQR=0;PRO=0;QA=2965;QR=6074;RO=152;RPL=0;RPP=163.699;RPPR=333.074;RPR=74;RUN=1;SAF=74;SAP=163.699;SAR=0;SRF=152;SRP=333.074;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:23,1:23:901:1:41:0,-3.13015,-77.2966 0/1:52:43,9:43:1722:9:353:-16.4744,0,-139.548 0/1:22:16,6:16:647:6:240:-15.3519,0,-51.9412 0/1:34:21,13:21:845:13:516:-36.5509,0,-66.1267 0/1:48:24,24:24:950:24:970:-73.1472,0,-71.3526 0/1:46:25,21:25:1009:21:845:-62.5152,0,-77.2571 dDocent_Contig_10638 83 . G A 436.226 . AB=0.225806;ABP=83.9852;AC=5;AF=0.416667;AN=12;AO=28;CIGAR=1X;DP=141;DPB=141;DPRA=1.45882;EPP=22.8638;EPPR=248.387;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.785714;PAIREDR=0.955752;PAO=0;PQA=0;PQR=0;PRO=0;QA=982;QR=3804;RO=113;RPL=28;RPP=63.8115;RPPR=248.387;RPR=0;RUN=1;SAF=22;SAP=22.8638;SAR=6;SRF=113;SRP=248.387;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:29:21,8:21:714:8:252:-14.2564,0,-55.846 0/0:17:17,0:17:580:0:0:0,-5.11751,-52.5229 0/1:25:22,3:22:739:3:104:-2.17734,0,-59.2973 0/1:21:12,9:12:411:9:311:-22.0037,0,-30.9975 0/1:25:20,5:20:670:5:192:-10.121,0,-53.0871 0/1:24:21,3:21:690:3:123:-4.24007,0,-55.1835 dDocent_Contig_10639 33 . C A 8592.46 . AB=0.146667;ABP=84.3392;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=2X;DP=326;DPB=326;DPRA=0.806452;EPP=26.8965;EPPR=115.927;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0.980769;PAO=0;PQA=0;PQR=0;PRO=0;QA=439;QR=2043;RO=52;RPL=0;RPP=26.8965;RPPR=115.927;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=52;SRP=115.927;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:42:12,0,30,0:12:475:0,30,0:0,1167,0:-92.6657,-96.2781,-135.374,0,-39.4892,-30.4583,-96.2781,-135.374,-39.4892,-135.374 0|0:42:27,0,14,1:27:1053:0,14,1:0,544,22:-36.7517,-44.8795,-131.439,0,-86.7423,-82.5279,-43.4834,-130.034,-85.3402,-129.733 0|0:44:6,0,38,0:6:240:0,38,0:0,1511,0:-122.982,-124.789,-144.559,0,-20.1693,-8.73013,-124.789,-144.559,-20.1693,-144.559 0|0:30:7,0,23,0:7:275:0,23,0:0,916,0:-73.7161,-75.8233,-98.4404,0,-23.0108,-16.0871,-75.8233,-98.4404,-23.0108,-98.4404 0|0:93:0,0,87,6:0:0:0,87,6:0,3428,137:-308.371,-308.371,-308.371,-26.1896,-26.1896,0,-299.209,-299.209,-16.8122,-297.403 1|0:75:0,11,62,2:0:0:11,62,2:439,2406,44:-233.982,-197.824,-194.513,-36.3316,0,-17.6677,-231.168,-195.012,-33.5451,-230.566 dDocent_Contig_10640 33 . G A 2402.18 . AB=0.323129;ABP=82.8968;AC=6;AF=0.5;AN=12;AO=95;CIGAR=1X;DP=294;DPB=294;DPRA=0;EPP=209.3;EPPR=432.962;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3756;QR=7701;RO=198;RPL=0;RPP=209.3;RPPR=432.962;RPR=95;RUN=1;SAF=95;SAP=209.3;SAR=0;SRF=198;SRP=432.962;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:20,4:20:740:4:163:-7.83371,0,-59.6775 0/1:80:39,41:39:1504:41:1633:-123.122,0,-111.518 0/1:11:7,4:7:287:4:161:-11.5636,0,-22.8939 0/1:36:14,22:14:550:22:851:-66.0597,0,-39.0045 0/1:83:72,11:72:2810:11:444:-15.3309,0,-228.04 0/1:60:46,13:46:1810:13:504:-27.5302,0,-144.947 dDocent_Contig_10641 87 . C A 334.155 . AB=0.34;ABP=14.1282;AC=3;AF=0.25;AN=12;AO=17;CIGAR=1X;DP=76;DPB=76;DPRA=1.92308;EPP=39.9253;EPPR=131.127;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=585;QR=2026;RO=59;RPL=17;RPP=39.9253;RPPR=131.127;RPR=0;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=59;SRP=131.127;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:12,13:12:417:13:447:-33.0335,0,-30.3375 0/1:12:10,2:10:339:2:69:-2.9403,0,-27.2258 0/0:10:10,0:10:349:0:0:0,-3.0103,-31.7468 0/1:13:11,2:11:375:2:69:-2.63927,0,-30.166 0/0:6:6,0:6:203:0:0:0,-1.80618,-18.6022 0/0:10:10,0:10:343:0:0:0,-3.0103,-31.202 dDocent_Contig_10642 62 . T A 144.737 . AB=0.666667;ABP=5.18177;AC=1;AF=0.1;AN=10;AO=6;CIGAR=1X;DP=53;DPB=53;DPRA=0.818182;EPP=16.0391;EPPR=105.07;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.978723;PAO=0;PQA=0;PQR=0;PRO=0;QA=205;QR=1490;RO=47;RPL=6;RPP=16.0391;RPPR=105.07;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=47;SRP=105.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:13:13,0:13:398:0:0:0,-3.91339,-36.119 0/0:16:16,0:16:486:0:0:0,-4.81648,-44.0341 0/0:8:8,0:8:273:0:0:0,-2.40824,-24.9028 0/1:9:3,6:3:100:6:205:-16.0757,0,-6.62133 ./.:.:.:.:.:.:.:. 0/0:7:7,0:7:233:0:0:0,-2.10721,-21.2963 dDocent_Contig_10643 8 . G T 77.8968 . AB=0.5;ABP=3.0103;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=110;DPB=110;DPRA=0.288462;EPP=9.52472;EPPR=235.358;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.981308;PAO=0;PQA=0;PQR=0;PRO=0;QA=116;QR=4056;RO=107;RPL=0;RPP=9.52472;RPPR=235.358;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=107;SRP=235.358;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:6:3,3:3:115:3:116:-9.01152,0,-8.91871 0/0:19:19,0:19:711:0:0:0,-5.71957,-64.3168 0/0:11:11,0:11:415:0:0:0,-3.31133,-37.6986 0/0:43:43,0:43:1634:0:0:0,-12.9443,-147.323 0/0:17:17,0:17:649:0:0:0,-5.11751,-58.7441 0/0:14:14,0:14:532:0:0:0,-4.21442,-48.2225 dDocent_Contig_10644 19 . C T 4066.14 . AB=0.523466;ABP=4.33513;AC=6;AF=0.5;AN=12;AO=145;CIGAR=4M1X4M;DP=277;DPB=277.667;DPRA=0;EPP=317.874;EPPR=248.387;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0.758621;PAIREDR=0.840708;PAO=0;PQA=0;PQR=0;PRO=0;QA=5511;QR=4461;RO=113;RPL=0;RPP=317.874;RPPR=248.387;RPR=145;RUN=1;SAF=145;SAP=317.874;SAR=0;SRF=113;SRP=248.387;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:34:16,2,3,13,0:16:645:2,3,13,0:76,113,491,0:-35.4238,-34.0071,-86.5837,-30.9822,-77.9288,-83.2579,0,-46.9538,-43.9299,-49.2715,-40.2403,-87.1857,-84.1609,-53.1849,-93.418 0|1:38:15,3,0,20,0:15:589:3,0,20,0:117,0,776,0:-59.241,-54.139,-101.681,-63.7565,-102.584,-112.201,0,-38.8281,-48.4448,-42.4242,-63.7565,-102.584,-112.201,-48.4448,-112.201 0|1:30:9,1,0,20,0:9:358:1,0,20,0:40,0,748,0:-58.5147,-57.9277,-87.1105,-61.224,-87.4115,-90.7072,0,-26.1792,-29.4745,-23.4539,-61.224,-87.4115,-90.7072,-29.4745,-90.7072 0|1:58:23,0,4,30,0:23:909:0,4,30,0:0,160,1115,0:-84.3115,-91.2352,-166.047,-78.0514,-152.865,-151.661,0,-74.815,-61.6334,-65.7841,-91.2352,-166.047,-152.865,-74.815,-166.047 0|1:38:13,0,0,21,4:13:511:0,0,21,4:0,0,807,163:-62.3111,-66.2245,-108.257,-66.2245,-108.257,-108.257,0,-42.0197,-42.0197,-35.6981,-52.7735,-94.8074,-94.8074,-28.569,-93.6033 0|1:79:37,0,0,41,1:37:1449:0,0,41,1:0,0,1574,41:-118.034,-129.172,-248.318,-129.172,-248.318,-248.318,0,-119.125,-119.125,-106.783,-125.787,-244.934,-244.934,-115.741,-244.633 dDocent_Contig_10646 32 . A G 40.1165 . AB=0.444444;ABP=3.25157;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X2M;DP=67;DPB=67;DPRA=1.71429;EPP=24.725;EPPR=115.927;GTI=0;LEN=1;MEANALT=1.2;MQM=13;MQMR=13;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=130;QR=1997;RO=52;RPL=0;RPP=24.725;RPPR=115.927;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=52;SRP=115.927;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:14:13,0,1:13:506:0,1:0,13:0,-3.91339,-15.2222,-3.20443,-14.6163,-14.3153 0|0:13:11,0,2:11:425:0,2:0,26:0,-3.31133,-12.8741,-1.99441,-11.6626,-11.0605 0|0:7:6,0,1:6:230:0,1:0,13:0,-1.80618,-7.03769,-1.09722,-6.43385,-6.13282 0|0:17:15,0,2:15:557:0,2:0,26:0,-4.51545,-17.5379,-3.19853,-16.3253,-15.7233 0|0:7:6,1,0:6:240:1,0:40,0:0,-0.808032,-5.84626,-1.80618,-6.14729,-7.01552 1|1:9:1,4,4:1:39:4,4:159,52:-4.72107,-1.53491,-1.20461,-2.60471,0,-2.26862 dDocent_Contig_10647 49 . T G 33.9085 . AB=0.113208;ABP=71.8828;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=101;DPB=101;DPRA=2.20833;EPP=16.0391;EPPR=209.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.333333;PAIREDR=0.463158;PAO=0;PQA=0;PQR=0;PRO=0;QA=242;QR=3828;RO=95;RPL=0;RPP=16.0391;RPPR=209.3;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=95;SRP=209.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:720:0:0:0,-5.41854,-65.1267 0/1:26:23,3:23:921:3:120:-3.36053,0,-75.3672 0/0:7:7,0:7:286:0:0:0,-2.10721,-26.1148 0/1:27:24,3:24:976:3:122:-3.24468,0,-80.0084 0/0:3:3,0:3:123:0:0:0,-0.90309,-11.4648 0/0:20:20,0:20:802:0:0:0,-6.0206,-72.4961 dDocent_Contig_10648 83 . T C 101.795 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=4;CIGAR=1X;DP=51;DPB=51;DPRA=1.09091;EPP=11.6962;EPPR=105.07;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.957447;PAO=0;PQA=0;PQR=0;PRO=0;QA=117;QR=1651;RO=47;RPL=4;RPP=11.6962;RPPR=105.07;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=47;SRP=105.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:256:0:0:0,-2.10721,-23.393 0/0:8:8,0:8:285:0:0:0,-2.40824,-25.9936 0/0:15:15,0:15:535:0:0:0,-4.51545,-48.4821 0/0:15:14,1:14:472:1:13:0,-3.21546,-41.496 1/1:3:0,3:0:0:3:104:-9.70221,-0.90309,0 0/0:3:3,0:3:103:0:0:0,-0.90309,-9.60896 dDocent_Contig_10650 14 . G T 36.5317 . AB=0.129032;ABP=40.0654;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=164;DPB=164;DPRA=1.16541;EPP=11.6962;EPPR=350.446;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=157;QR=6293;RO=160;RPL=0;RPP=11.6962;RPPR=350.446;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=160;SRP=350.446;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:781:0:0:0,-6.0206,-70.6047 0/0:59:59,0:59:2322:0:0:0,-17.7608,-209.155 0/0:29:29,0:29:1110:0:0:0,-8.72987,-100.183 0/1:31:27,4:27:1086:4:157:-5.17596,0,-88.696 0/0:10:10,0:10:400:0:0:0,-3.0103,-36.359 0/0:15:15,0:15:594:0:0:0,-4.51545,-53.7917 dDocent_Contig_10651 24 . C A 37.4196 . AB=0.148936;ABP=53.3238;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=227;DPB=227;DPRA=1.03378;EPP=39.9253;EPPR=459.02;GTI=0;LEN=1;MEANALT=1;MQM=25.9412;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.914286;PAO=0;PQA=0;PQR=0;PRO=0;QA=656;QR=8452;RO=210;RPL=0;RPP=39.9253;RPPR=459.02;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=210;SRP=459.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:60:53,7:53:2135:7:285:0,-4.3432,-178.6 0/1:47:40,7:40:1618:7:283:-5.26471,0,-131.695 0/0:14:13,1:13:532:1:36:0,-1.15988,-45.1716 0/0:39:39,0:39:1583:0:0:0,-11.7402,-142.699 0/0:32:30,2:30:1222:2:52:0,-6.38565,-107.001 0/0:35:35,0:35:1362:0:0:0,-10.536,-122.823 dDocent_Contig_10653 15 . C A 228.849 . AB=0.159574;ABP=97.6311;AC=4;AF=0.333333;AN=12;AO=15;CIGAR=1X;DP=194;DPB=194;DPRA=0.47;EPP=35.5824;EPPR=391.704;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994413;PAO=0;PQA=0;PQR=0;PRO=0;QA=591;QR=7082;RO=179;RPL=0;RPP=35.5824;RPPR=391.704;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=179;SRP=391.704;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:19,2:19:744:2:78:-1.08167,0,-60.9614 0/1:29:20,9:20:799:9:364:-24.3945,0,-63.4978 0/1:11:10,1:10:396:1:40:-0.684349,0,-32.6837 0/1:33:30,3:30:1186:3:109:-0.232252,0,-97.0853 0/0:45:45,0:45:1764:0:0:0,-13.5463,-158.982 0/0:55:55,0:55:2193:0:0:0,-16.5566,-197.545 dDocent_Contig_10654 14 . C T 31.5286 . AB=0.2;ABP=10.8276;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=1X;DP=101;DPB=101;DPRA=0.549451;EPP=7.35324;EPPR=217.986;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.717172;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=3958;RO=99;RPL=0;RPP=7.35324;RPPR=217.986;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=99;SRP=217.986;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:487:0:0:0,-3.61236,-44.1811 0/0:29:29,0:29:1141:0:0:0,-8.72987,-102.973 0/0:12:12,0:12:481:0:0:0,-3.61236,-43.6396 0/0:29:29,0:29:1160:0:0:0,-8.72987,-104.679 0/1:10:8,2:8:325:2:81:-4.67543,0,-26.6091 0/0:9:9,0:9:364:0:0:0,-2.70927,-33.1244 dDocent_Contig_10655 7 . T A 11635.1 . AB=0.696203;ABP=161.5;AC=7;AF=0.583333;AN=12;AO=386;CIGAR=1X;DP=532;DPB=532;DPRA=0;EPP=841.199;EPPR=317.874;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.8938;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.917241;PAO=0;PQA=0;PQR=0;PRO=0;QA=14684;QR=5554;RO=145;RPL=0;RPP=841.199;RPPR=317.874;RPR=386;RUN=1;SAF=386;SAP=841.199;SAR=0;SRF=145;SRP=317.874;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:58:2,56:2:78:56:2126:-184.161,-10.0563,0 0/1:101:37,63:37:1421:63:2369:-183.043,0,-97.9598 0/1:68:27,41:27:1031:41:1568:-120.92,0,-72.6277 0/1:94:14,80:14:531:80:3040:-245.471,0,-19.836 0/1:103:52,51:52:1988:51:1948:-144.556,0,-148.155 0/1:108:13,95:13:505:95:3633:-294.583,0,-13.288 dDocent_Contig_10656 18 . C T 17800.3 . AB=0.0582656;ABP=1253.83;AC=0;AF=0;AN=12;AO=43;CIGAR=1X1M1X;DP=828;DPB=828;DPRA=0;EPP=96.3836;EPPR=482.906;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1707;QR=8789;RO=221;RPL=0;RPP=96.3836;RPPR=482.906;RPR=43;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=221;SRP=482.906;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:144:26,1,117:26:1046:1,117:31,4680:-377.75,-383.089,-468.992,0,-83.807,-51.0715 0|0:191:57,11,123:57:2271:11,123:423,4931:-389.093,-371.534,-555.228,0,-152.3,-149.991 0|0:80:29,10,41:29:1140:10,41:406,1661:-128.234,-103.479,-194.222,0,-60.2606,-81.4062 0|0:173:45,20,108:45:1779:20,108:811,4323:-342.547,-289.213,-429.582,0,-79.5014,-113.873 0|0:90:28,0,62:28:1116:0,62:0,2455:-193.999,-202.428,-294.329,0,-92.2978,-73.6339 0|0:150:36,1,113:36:1437:1,113:36,4499:-359.633,-367.533,-485.584,0,-115.453,-84.3731 dDocent_Contig_10657 10 . A G 4387.68 . AB=0.432133;ABP=17.4527;AC=6;AF=0.5;AN=12;AO=156;CIGAR=1X;DP=361;DPB=361;DPRA=0;EPP=341.76;EPPR=448.162;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.653846;PAIREDR=0.668293;PAO=0;PQA=0;PQR=0;PRO=0;QA=6188;QR=8218;RO=205;RPL=0;RPP=341.76;RPPR=448.162;RPR=156;RUN=1;SAF=156;SAP=341.76;SAR=0;SRF=205;SRP=448.162;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:21,14:21:841:14:558:-40.0261,0,-65.4646 0/1:74:43,31:43:1741:31:1245:-90.0396,0,-134.628 0/1:80:36,44:36:1455:44:1684:-127.695,0,-107.11 0/1:60:33,27:33:1329:27:1081:-79.5128,0,-101.81 0/1:42:33,9:33:1309:9:364:-20.4817,0,-105.431 0/1:70:39,31:39:1543:31:1256:-92.2347,0,-118.038 dDocent_Contig_10660 8 . G A 591.269 . AB=0.358209;ABP=14.7103;AC=2;AF=0.2;AN=10;AO=24;CIGAR=1X;DP=94;DPB=94;DPRA=3.72222;EPP=55.1256;EPPR=155.013;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.985714;PAO=0;PQA=0;PQR=0;PRO=0;QA=910;QR=2672;RO=70;RPL=0;RPP=55.1256;RPPR=155.013;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=70;SRP=155.013;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:729:0:0:0,-5.71957,-65.941 0/1:47:35,12:35:1333:12:453:-26.9695,0,-106.108 0/1:20:8,12:8:306:12:457:-35.4579,0,-21.88 0/0:7:7,0:7:269:0:0:0,-2.10721,-24.5747 0/0:1:1,0:1:35:0:0:0,-0.30103,-3.49863 ./.:.:.:.:.:.:.:. dDocent_Contig_10661 11 . A T 83.036 . AB=0.134615;ABP=63.3104;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=408;DPB=408;DPRA=1.03383;EPP=31.2394;EPPR=860.742;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.923077;PAIREDR=0.84557;PAO=0;PQA=0;PQR=0;PRO=0;QA=518;QR=15702;RO=395;RPL=0;RPP=31.2394;RPPR=860.742;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=395;SRP=860.742;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:76:76,0:76:3031:0:0:0,-22.8783,-272.884 0/0:102:99,3:99:3933:3:121:0,-19.4249,-342.697 0/0:57:57,0:57:2267:0:0:0,-17.1587,-204.195 0/0:83:82,1:82:3240:1:41:0,-20.8909,-287.573 0/0:38:36,2:36:1446:2:77:0,-4.13094,-123.081 0/1:52:45,7:45:1785:7:279:-9.82647,0,-145.217 dDocent_Contig_10662 8 . G A 41.263 . AB=0.138889;ABP=43.7857;AC=2;AF=0.166667;AN=12;AO=5;CIGAR=1X;DP=195;DPB=195;DPRA=0.45283;EPP=13.8677;EPPR=341.12;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.610526;PAO=0;PQA=0;PQR=0;PRO=0;QA=193;QR=7274;RO=190;RPL=0;RPP=13.8677;RPPR=415.59;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=181;SRP=341.12;SRR=9;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:775:0:0:0,-6.0206,-70.0751 0/1:30:26,4:26:1001:4:154:-5.20256,0,-81.3705 0/0:36:36,0:36:1377:0:0:0,-10.8371,-124.213 0/1:6:5,1:5:191:1:39:-2.09038,0,-15.7519 0/0:52:52,0:52:2001:0:0:0,-15.6536,-180.326 0/0:51:51,0:51:1929:0:0:0,-15.3525,-173.853 dDocent_Contig_10663 9 . C G 1016.68 . AB=0.23348;ABP=143.065;AC=5;AF=0.416667;AN=12;AO=55;CIGAR=1X3M;DP=253;DPB=253;DPRA=0;EPP=27.6861;EPPR=119.309;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.527273;PAIREDR=0.442623;PAO=0;PQA=0;PQR=0;PRO=0;QA=2009;QR=6870;RO=183;RPL=0;RPP=122.441;RPPR=400.39;RPR=55;RUN=1;SAF=40;SAP=27.6861;SAR=15;SRF=141;SRP=119.309;SRR=42;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:26:24,0,2:24:894:0,2:0,77:0,-7.22472,-80.386,-0.517638,-74.0626,-73.4606 0|1:41:37,0,4:37:1402:0,4:0,154:-1.89123,-13.0293,-127.966,0,-115.321,-114.116 0|1:29:19,0,10:19:696:0,10:0,352:-23.277,-28.9966,-85.8754,0,-57.2355,-54.2252 0|1:62:36,5,21:36:1383:5,21:196,774:-52.4718,-49.3941,-161.422,0,-99.6447,-107.238 0|1:54:36,5,12:36:1324:5,12:197,424:-23.6738,-18.7612,-125.509,0,-92.4899,-104.621 0|1:41:31,4,6:31:1171:4,6:147,228:-9.41386,-9.15577,-103.922,0,-86.4269,-94.2336 dDocent_Contig_10664 9 . C T 157.48 . AB=0.126866;ABP=165.06;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=2X;DP=411;DPB=411;DPRA=0;EPP=44.6459;EPPR=821.655;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=59.9682;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=0;PAIREDR=0.904509;PAO=0;PQA=0;PQR=0;PRO=0;QA=871;QR=14405;RO=377;RPL=0;RPP=52.9542;RPPR=821.655;RPR=23;RUN=1;SAF=22;SAP=44.6459;SAR=1;SRF=377;SRP=821.655;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:93:91,2,0:91:3467:2,0:78,0:0,-20.5923,-304.717,-27.3937,-305.319,-311.731 0|0:68:63,1,4:63:2415:1,4:39,156:0,-15.759,-213.665,-6.14138,-201.142,-203.144 0|0:64:63,1,0:63:2402:1,0:39,0:0,-15.3694,-212.496,-18.9649,-212.797,-216.003 0|1:72:63,8,1:63:2412:8,1:296,39:-5.23032,0,-195.528,-20.9871,-194.731,-218.641 0|0:52:49,2,1:49:1852:2,1:76,39:0,-8.52406,-159.714,-11.5413,-157.11,-163.042 0|1:62:48,9,5:48:1857:9,5:343,156:-13.7395,0,-149.911,-16.2286,-140.639,-167.27 dDocent_Contig_10665 74 . C A 2506.97 . AB=0.367424;ABP=43.3141;AC=6;AF=0.5;AN=12;AO=97;CIGAR=1X;DP=264;DPB=264;DPRA=0;EPP=213.643;EPPR=365.646;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3771;QR=6418;RO=167;RPL=97;RPP=213.643;RPPR=365.646;RPR=0;RUN=1;SAF=97;SAP=213.643;SAR=0;SRF=167;SRP=365.646;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:3,19:3:121:19:730:-59.3987,0,-4.65733 0/1:78:47,31:47:1791:31:1197:-84.5379,0,-137.947 0/1:34:20,14:20:781:14:542:-38.8822,0,-60.3767 0/1:39:33,6:33:1264:6:234:-9.68845,0,-102.291 0/1:69:45,24:45:1738:24:951:-65.1233,0,-135.894 0/1:22:19,3:19:723:3:117:-4.28755,0,-58.7739 dDocent_Contig_10666 48 . C A 671.219 . AB=0.230769;ABP=76.6733;AC=4;AF=0.4;AN=10;AO=29;CIGAR=1X;DP=178;DPB=178;DPRA=1.34463;EPP=65.983;EPPR=326.56;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0.931034;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1162;QR=5841;RO=149;RPL=0;RPP=65.983;RPPR=326.56;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=149;SRP=326.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:65:51,14:51:2019:14:567:-31.8059,0,-162.341 0/1:52:39,13:39:1531:13:519:-31.4032,0,-122.38 0/0:40:40,0:40:1533:0:0:0,-12.0412,-138.208 0/0:19:19,0:19:758:0:0:0,-5.71957,-68.5445 1/1:2:0,2:0:0:2:76:-7.21354,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_10667 65 . A T 64.7446 . AB=0.136364;ABP=53.5464;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=231;DPB=231;DPRA=1.22115;EPP=26.8965;EPPR=480.734;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.909091;PAIREDR=0.863636;PAO=0;PQA=0;PQR=0;PRO=0;QA=434;QR=8710;RO=220;RPL=11;RPP=26.8965;RPPR=480.734;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=220;SRP=480.734;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1638:0:0:0,-12.3422,-147.652 0/1:44:38,6:38:1496:6:232:-7.99722,0,-121.648 0/0:43:41,2:41:1614:2:81:0,-5.25856,-137.8 0/0:40:37,3:37:1472:3:121:0,-0.761002,-121.446 0/0:36:36,0:36:1411:0:0:0,-10.8371,-127.25 0/0:27:27,0:27:1079:0:0:0,-8.12781,-97.3976 dDocent_Contig_10668 107 . N T 190.066 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=202;QR=0;RO=0;RPL=0;RPP=18.2106;RPPR=0;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:160:-14.7162,-1.50515,0 1/1:2:0,2:0:0:2:42:-3.9887,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10669 16 . A G 315.794 . AB=0.166667;ABP=78.288;AC=4;AF=0.333333;AN=12;AO=19;CIGAR=1X;DP=206;DPB=206;DPRA=1.18852;EPP=44.2683;EPPR=409.076;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=755;QR=7408;RO=187;RPL=0;RPP=44.2683;RPPR=409.076;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=187;SRP=409.076;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:49:49,0:49:1952:0:0:0,-14.7505,-175.879 0/1:39:33,6:33:1299:6:244:-10.5987,0,-105.435 0/1:39:32,7:32:1241:7:269:-12.83,0,-100.224 0/0:64:61,3:61:2438:3:120:0,-8.07861,-208.382 0/0:12:12,0:12:478:0:0:0,-3.61236,-43.3679 1/1:3:0,3:0:0:3:122:-11.3725,-0.90309,0 dDocent_Contig_10670 15 . A T 78.2555 . AB=0.166667;ABP=31.9633;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=162;DPB=162;DPRA=1.08571;EPP=16.0391;EPPR=341.76;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99359;PAO=0;PQA=0;PQR=0;PRO=0;QA=241;QR=6231;RO=156;RPL=0;RPP=16.0391;RPPR=341.76;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=156;SRP=341.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:406:0:0:0,-3.0103,-36.9 0/0:27:26,1:26:1035:1:41:0,-4.03324,-89.338 0/0:44:44,0:44:1753:0:0:0,-13.2453,-157.984 0/1:30:25,5:25:1009:5:200:-9.34843,0,-82.0721 0/0:24:24,0:24:968:0:0:0,-7.22472,-87.4157 0/0:27:27,0:27:1060:0:0:0,-8.12781,-95.6843 dDocent_Contig_10671 24 . A T 764.703 . AB=0.2;ABP=143.722;AC=1;AF=0.0833333;AN=12;AO=36;CIGAR=1X;DP=390;DPB=390;DPRA=4.28571;EPP=81.1833;EPPR=771.712;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99435;PAO=0;PQA=0;PQR=0;PRO=0;QA=1466;QR=14062;RO=354;RPL=0;RPP=81.1833;RPPR=771.712;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=354;SRP=771.712;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:38,0:38:1511:0:0:0,-11.4391,-136.237 0/0:48:48,0:48:1908:0:0:0,-14.4494,-171.927 0/0:33:33,0:33:1298:0:0:0,-9.93399,-117.087 0/0:38:38,0:38:1507:0:0:0,-11.4391,-135.878 0/0:53:53,0:53:2114:0:0:0,-15.9546,-190.44 0/1:180:144,36:144:5724:36:1466:-77.9932,0,-460.779 dDocent_Contig_10672 20 . A C 104.306 . AB=0.136364;ABP=53.5464;AC=4;AF=0.333333;AN=12;AO=8;CIGAR=1X;DP=131;DPB=131;DPRA=0.541176;EPP=20.3821;EPPR=270.101;GTI=0;LEN=1;MEANALT=1;MQM=36;MQMR=59.8049;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.96748;PAO=0;PQA=0;PQR=0;PRO=0;QA=325;QR=4878;RO=123;RPL=0;RPP=20.3821;RPPR=270.101;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=123;SRP=270.101;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:32,0:32:1266:0:0:0,-9.63296,-114.157 0/1:39:35,4:35:1384:4:164:-1.1384,0,-113.081 0/0:16:16,0:16:631:0:0:0,-4.81648,-57.1232 0/0:37:37,0:37:1474:0:0:0,-11.1381,-132.913 1/1:2:0,2:0:0:2:80:-6.55908,-0.60206,0 0/1:5:3,2:3:123:2:81:-5.08328,0,-9.95964 dDocent_Contig_10673 23 . A G 975.274 . AB=0.267516;ABP=76.7159;AC=5;AF=0.416667;AN=12;AO=46;CIGAR=4M1X;DP=213;DPB=214.2;DPRA=0;EPP=102.898;EPPR=356.96;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=0.0869565;PAIREDR=0.447853;PAO=0;PQA=0;PQR=0;PRO=0;QA=1848;QR=6450;RO=163;RPL=0;RPP=102.898;RPPR=356.96;RPR=46;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=163;SRP=356.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:46:32,0,14:32:1264:0,14:0,561:-36.9845,-46.6175,-150.626,0,-104.407,-100.192 0|1:24:21,0,3:21:835:0,3:0,122:-4.14777,-10.4694,-79.207,0,-69.1427,-68.2396 0|0:56:51,0,4:51:2009:0,4:0,163:0,-15.3525,-180.61,-1.90718,-167.161,-165.957 0|1:36:21,0,15:21:839:0,15:0,594:-42.9595,-49.2812,-118.389,0,-69.5052,-64.9898 0|1:22:14,2,5:14:555:2,5:82,204:-12.6427,-10.0832,-55.1713,0,-38.9372,-44.2027 0|1:29:24,0,5:24:948:0,5:0,204:-10.0142,-17.2389,-95.2318,0,-78.3982,-76.893 dDocent_Contig_10674 21 . G T 2811.82 . AB=0.235405;ABP=325.914;AC=6;AF=0.5;AN=12;AO=125;CIGAR=1X;DP=531;DPB=531;DPRA=0;EPP=274.444;EPPR=884.628;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.968;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4996;QR=16028;RO=406;RPL=0;RPP=274.444;RPPR=884.628;RPR=125;RUN=1;SAF=125;SAP=274.444;SAR=0;SRF=406;SRP=884.628;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:18,16:18:685:16:648:-48.4179,0,-51.7287 0/1:77:65,12:65:2582:12:477:-20.1008,0,-209.336 0/1:58:53,5:53:2110:5:204:-1.28429,0,-172.619 0/1:61:45,16:45:1763:16:639:-39.479,0,-140.528 0/1:214:167,47:167:6587:47:1874:-104.443,0,-528.131 0/1:87:58,29:58:2301:29:1154:-77.9502,0,-181.066 dDocent_Contig_10675 40 . A G 962.038 . AB=0.307692;ABP=44.7694;AC=5;AF=0.5;AN=10;AO=40;CIGAR=1X;DP=130;DPB=130;DPRA=0;EPP=89.8692;EPPR=196.271;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1581;QR=3421;RO=89;RPL=0;RPP=89.8692;RPPR=196.271;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=89;SRP=196.271;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:52:35,16:35:1336:16:628:-41.4048,0,-105.075 0/1:38:26,12:26:982:12:484:-32.472,0,-77.2339 0/1:9:3,6:3:121:6:237:-18.9926,0,-8.57072 0/1:13:9,4:9:348:4:157:-10.5938,0,-27.7632 0/1:18:16,2:16:634:2:75:-1.70105,0,-51.9753 ./.:.:.:.:.:.:.:. dDocent_Contig_10676 1 . N G 177.398 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=8.07091;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=193;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:193:-17.7397,-1.50515,0 dDocent_Contig_10677 53 . C T 4108.36 . AB=0.671717;ABP=53.7219;AC=2;AF=0.25;AN=8;AO=133;CIGAR=1X;DP=285;DPB=285;DPRA=2.27586;EPP=291.816;EPPR=333.074;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5262;QR=6011;RO=152;RPL=133;RPP=291.816;RPPR=333.074;RPR=0;RUN=1;SAF=133;SAP=291.816;SAR=0;SRF=152;SRP=333.074;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:73:73,0:73:2888:0:0:0,-21.9752,-260.021 0/1:121:15,106:15:572:106:4204:-341.91,0,-15.3804 0/1:77:50,27:50:2004:27:1058:-72.3243,0,-157.37 0/0:14:14,0:14:547:0:0:0,-4.21442,-49.5649 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10678 7 . T C 404.502 . AB=0.576923;ABP=4.34659;AC=1;AF=0.1;AN=10;AO=15;CIGAR=2X;DP=145;DPB=145;DPRA=0.87395;EPP=35.5824;EPPR=285.302;GTI=0;LEN=1;MEANALT=1;MQM=45.4667;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.976923;PAO=0;PQA=0;PQR=0;PRO=0;QA=560;QR=4939;RO=130;RPL=0;RPP=35.5824;RPPR=285.302;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=130;SRP=285.302;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:19:19,0:19:711:0:0:0,-5.71957,-64.3178 0|0:54:54,0:54:2051:0:0:0,-16.2556,-184.829 0|0:27:27,0:27:1029:0:0:0,-8.12781,-92.9193 0|0:19:19,0:19:722:0:0:0,-5.71957,-65.3103 .:.:.:.:.:.:.:. 0|1:26:11,15:11:426:15:560:-42.0523,0,-30.8681 dDocent_Contig_10679 40 . C A 1865.47 . AB=0.310638;ABP=76.2028;AC=2;AF=0.166667;AN=12;AO=73;CIGAR=1X;DP=457;DPB=457;DPRA=2.11712;EPP=161.528;EPPR=836.856;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2889;QR=15439;RO=384;RPL=0;RPP=161.528;RPPR=836.856;RPR=73;RUN=1;SAF=73;SAP=161.528;SAR=0;SRF=384;SRP=836.856;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:608:0:0:0,-4.51545,-55.0577 0/0:86:86,0:86:3449:0:0:0,-25.8886,-310.448 0/0:61:61,0:61:2459:0:0:0,-18.3628,-221.448 0/0:60:60,0:60:2411:0:0:0,-18.0618,-217.139 0/1:75:62,13:62:2486:13:519:-24.4775,0,-201.301 0/1:160:100,60:100:4026:60:2370:-165.292,0,-314.142 dDocent_Contig_10681 48 . A G 46.4913 . AB=0.172414;ABP=30.0414;AC=2;AF=0.166667;AN=12;AO=5;CIGAR=1X;DP=201;DPB=201;DPRA=0.337209;EPP=13.8677;EPPR=428.619;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.688776;PAO=0;PQA=0;PQR=0;PRO=0;QA=173;QR=6660;RO=196;RPL=0;RPP=13.8677;RPPR=428.619;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=428.619;SRR=196;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:19,4:19:630:4:138:-5.83671,0,-50.088 0/0:43:43,0:43:1457:0:0:0,-12.9443,-131.421 0/1:6:5,1:5:174:1:35:-1.69245,0,-14.1958 0/0:52:52,0:52:1794:0:0:0,-15.6536,-161.746 0/0:44:44,0:44:1479:0:0:0,-13.2453,-133.398 0/0:33:33,0:33:1126:0:0:0,-9.93399,-101.643 dDocent_Contig_10682 40 . C T 31.3017 . AB=0.16;ABP=28.1125;AC=2;AF=0.166667;AN=12;AO=5;CIGAR=1X;DP=99;DPB=99;DPRA=2.66667;EPP=13.8677;EPPR=207.129;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=184;QR=3782;RO=94;RPL=0;RPP=13.8677;RPPR=207.129;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=94;SRP=207.129;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:3:3,0:3:123:0:0:0,-0.90309,-11.4648 0/0:17:17,0:17:683:0:0:0,-5.11751,-61.8008 0/1:23:20,3:20:809:3:109:-3.24374,0,-66.203 0/0:47:46,1:46:1844:1:38:0,-10.3511,-162.369 0/0:7:7,0:7:282:0:0:0,-2.10721,-25.7526 0/1:2:1,1:1:41:1:37:-3.09577,0,-3.49251 dDocent_Contig_10683 26 . A G 42.5932 . AB=0.109091;ABP=76.0113;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=382;DPB=382;DPRA=1.8012;EPP=35.5824;EPPR=799.941;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.986376;PAO=0;PQA=0;PQR=0;PRO=0;QA=603;QR=14679;RO=367;RPL=0;RPP=35.5824;RPPR=799.941;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=367;SRP=799.941;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:69:65,4:65:2595:4:163:0,-5.71264,-218.621 0/0:94:92,2:92:3691:2:75:0,-21.178,-325.083 0/0:81:78,3:78:3118:3:121:0,-13.1032,-269.405 0/1:55:49,6:49:1959:6:244:-5.78218,0,-159.947 0/0:38:38,0:38:1509:0:0:0,-11.4391,-136.056 0/0:45:45,0:45:1807:0:0:0,-13.5463,-162.839 dDocent_Contig_10684 14 . G T 362.57 . AB=0.129771;ABP=314.94;AC=5;AF=0.416667;AN=12;AO=35;CIGAR=1X;DP=308;DPB=308;DPRA=0;EPP=79.0118;EPPR=595.822;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1402;QR=10893;RO=273;RPL=0;RPP=79.0118;RPPR=595.822;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=273;SRP=595.822;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:46:45,1:45:1787:1:41:0,-9.75281,-156.95 0/1:50:42,8:42:1702:8:322:-14.2968,0,-138.345 0/1:62:55,7:55:2172:7:283:-7.17972,0,-176.992 0/1:35:30,5:30:1191:5:203:-8.11701,0,-96.9292 0/1:58:51,7:51:2048:7:281:-8.20244,0,-167.044 0/1:57:50,7:50:1993:7:272:-7.68279,0,-162.401 dDocent_Contig_10686 7 . T A 764.149 . AB=0.336957;ABP=24.253;AC=2;AF=0.166667;AN=12;AO=33;CIGAR=2X;DP=223;DPB=223;DPRA=1.29897;EPP=74.6689;EPPR=415.59;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.757576;PAIREDR=0.763158;PAO=0;PQA=0;PQR=0;PRO=0;QA=1261;QR=7220;RO=190;RPL=0;RPP=74.6689;RPPR=415.59;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=190;SRP=415.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:34:32,2:32:1213:2:76:0,-3.02021,-102.252 0|1:57:40,17:40:1531:17:654:-42.0383,0,-120.906 0|0:37:37,0:37:1410:0:0:0,-11.1381,-127.181 0|1:35:21,14:21:798:14:531:-37.5984,0,-61.608 0|0:25:25,0:25:943:0:0:0,-7.52575,-85.1838 0|0:35:35,0:35:1325:0:0:0,-10.536,-119.535 dDocent_Contig_10687 19 . A C 917.229 . AB=0.5;ABP=3.0103;AC=3;AF=0.3;AN=10;AO=29;CIGAR=1X;DP=139;DPB=139;DPRA=0.449799;EPP=65.983;EPPR=241.872;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1153;QR=4348;RO=110;RPL=0;RPP=65.983;RPPR=241.872;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=110;SRP=241.872;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:14,1:14:536:1:40:0,-0.519771,-44.5774 0/0:58:58,0:58:2315:0:0:0,-17.4597,-208.512 0/1:26:13,13:13:525:13:522:-39.4997,0,-39.7706 0/0:25:25,0:25:972:0:0:0,-7.52575,-87.7745 1/1:15:0,15:0:0:15:591:-53.524,-4.51545,0 ./.:.:.:.:.:.:.:. dDocent_Contig_10688 12 . G A 450.331 . AB=0.15;ABP=258.375;AC=6;AF=0.5;AN=12;AO=36;CIGAR=1X;DP=240;DPB=240;DPRA=0;EPP=81.1833;EPPR=445.991;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.970588;PAO=0;PQA=0;PQR=0;PRO=0;QA=1403;QR=7905;RO=204;RPL=0;RPP=81.1833;RPPR=445.991;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=204;SRP=445.991;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:29,9:29:1114:9:323:-17.9642,0,-89.1013 0/1:61:55,6:55:2145:6:239:-3.52197,0,-174.88 0/1:26:23,3:23:880:3:120:-3.36053,0,-71.6658 0/1:30:26,4:26:977:4:163:-6.02753,0,-79.1937 0/1:36:32,4:32:1261:4:160:-3.94672,0,-102.922 0/1:49:39,10:39:1528:10:398:-21.4279,0,-123.012 dDocent_Contig_10689 7 . T C 736.451 . AB=0.145679;ABP=444.645;AC=3;AF=0.25;AN=12;AO=69;CIGAR=1X;DP=601;DPB=601;DPRA=9.51667;EPP=152.842;EPPR=1158.23;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.4887;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2601;QR=20103;RO=532;RPL=0;RPP=152.842;RPPR=1158.23;RPR=69;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=532;SRP=1158.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:126:98,28:98:3728:28:1040:-55.9758,0,-297.707 0/1:179:158,21:158:5940:21:799:-18.3498,0,-479.061 0/1:100:90,10:90:3382:10:381:-4.54114,0,-274.422 0/0:166:156,10:156:5932:10:381:0,-15.3259,-499.195 0/0:17:17,0:17:636:0:0:0,-5.11751,-57.5727 0/0:13:13,0:13:485:0:0:0,-3.91339,-43.9917 dDocent_Contig_10691 8 . G T 640.408 . AB=0.158076;ABP=298.517;AC=4;AF=0.333333;AN=12;AO=51;CIGAR=1X;DP=406;DPB=406;DPRA=0;EPP=113.755;EPPR=769.54;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=59.966;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1943;QR=13477;RO=353;RPL=0;RPP=113.755;RPPR=769.54;RPR=51;RUN=1;SAF=51;SAP=113.755;SAR=0;SRF=353;SRP=769.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:51,1:51:1921:1:38:0,-12.2393,-169.329 0/1:73:59,14:59:2259:14:517:-24.8863,0,-181.508 0/1:96:87,9:87:3315:9:340:-2.05559,0,-269.589 0/1:64:53,11:53:2030:11:428:-19.6095,0,-163.67 0/0:61:57,4:57:2196:4:156:0,-3.94554,-183.446 0/1:58:46,12:46:1756:12:464:-24.6519,0,-140.834 dDocent_Contig_10692 11 . C A 169.556 . AB=0.139785;ABP=107.825;AC=3;AF=0.25;AN=12;AO=15;CIGAR=1X;DP=161;DPB=161;DPRA=1.61842;EPP=35.5824;EPPR=320.045;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.561644;PAO=0;PQA=0;PQR=0;PRO=0;QA=605;QR=5807;RO=146;RPL=0;RPP=35.5824;RPPR=320.045;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=146;SRP=320.045;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:637:0:0:0,-4.81648,-57.6604 0/1:28:24,4:24:939:4:163:-6.62959,0,-76.3866 0/0:22:22,0:22:876:0:0:0,-6.62266,-79.1495 0/1:37:34,3:34:1342:3:123:-0.326678,0,-109.89 0/0:30:28,2:28:1129:2:79:0,-1.53366,-94.3928 0/1:28:22,6:22:884:6:240:-13.5463,0,-71.4392 dDocent_Contig_10693 8 . G A 48.564 . AB=0.10084;ABP=167.695;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=694;DPB=694;DPRA=1.06402;EPP=31.2394;EPPR=1481.78;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.988253;PAO=0;PQA=0;PQR=0;PRO=0;QA=503;QR=25799;RO=681;RPL=0;RPP=31.2394;RPPR=1481.78;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=681;SRP=1481.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:94:94,0:94:3516:0:0:0,-28.2968,-316.576 0/0:122:121,1:121:4617:1:38:0,-32.9284,-411.788 0/0:136:136,0:136:5150:0:0:0,-40.9401,-463.523 0/0:130:130,0:130:4900:0:0:0,-39.1339,-441.037 0/0:93:93,0:93:3539:0:0:0,-27.9958,-318.634 0/1:119:107,12:107:4077:12:465:-6.37927,0,-331.201 dDocent_Contig_10695 121 . G T 340.671 . AB=0.12069;ABP=75.4926;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X2M1X;DP=281;DPB=281;DPRA=1.13725;EPP=18.2106;EPPR=556.736;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=243;QR=8581;RO=255;RPL=0;RPP=18.2106;RPPR=556.736;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=556.736;SRR=255;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:58:50,7,0:50:1694:7,0:243,0:-4.94555,0,-135.511,-19.997,-137.619,-157.375 0|0:50:50,0,0:50:1674:0,0:0,0:0,-15.0515,-150.945,-15.0515,-150.945,-150.945 0|0:82:80,0,0:80:2710:0,0:0,0:0,-24.0824,-243.803,-24.0824,-243.803,-243.803 0|0:52:50,0,1:50:1651:0,1:0,34:0,-15.0515,-148.66,-12.1586,-145.902,-145.601 0|0:20:20,0,0:20:678:0,0:0,0:0,-6.0206,-61.3383,-6.0206,-61.3383,-61.3383 0|0:19:5,0,13:5:174:0,13:0,420:-32.3433,-33.8485,-48.0034,0,-14.1473,-10.2339 dDocent_Contig_10696 14 . G A 257.126 . AB=0.226415;ABP=37.4671;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=246;DPB=246;DPRA=0.811429;EPP=31.2394;EPPR=508.963;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=506;QR=9136;RO=233;RPL=0;RPP=31.2394;RPPR=508.963;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=233;SRP=508.963;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:40,0:40:1546:0:0:0,-12.0412,-139.381 0/0:45:45,0:45:1783:0:0:0,-13.5463,-160.699 0/0:18:17,1:17:666:1:30:0,-2.41897,-57.271 0/0:43:43,0:43:1670:0:0:0,-12.9443,-150.53 0/0:47:47,0:47:1839:0:0:0,-14.1484,-165.732 0/1:53:41,12:41:1632:12:476:-27.2355,0,-131.161 dDocent_Contig_10697 16 . G C 34.5377 . AB=0.222222;ABP=9.04217;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=1X;DP=79;DPB=79;DPRA=0.642857;EPP=7.35324;EPPR=168.042;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=3033;RO=76;RPL=0;RPP=7.35324;RPPR=168.042;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=76;SRP=168.042;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:8:7,0:7:269:0:0:0,-2.10721,-24.1615 0/0:20:20,0:20:781:0:0:0,-6.0206,-70.6051 0/0:14:14,0:14:571:0:0:0,-4.21442,-51.7317 0/0:5:5,0:5:198:0:0:0,-1.50515,-18.197 0/1:9:7,2:7:287:2:81:-4.97646,0,-23.496 0/0:23:23,0:23:927:0:0:0,-6.92369,-83.732 dDocent_Contig_10698 26 . A T 105.428 . AB=0.170213;ABP=47.41;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=165;DPB=165;DPRA=0.79661;EPP=20.3821;EPPR=343.931;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.936306;PAO=0;PQA=0;PQR=0;PRO=0;QA=302;QR=5876;RO=157;RPL=0;RPP=20.3821;RPPR=343.931;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=157;SRP=343.931;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:891:0:0:0,-7.52575,-80.4944 0/0:18:18,0:18:685:0:0:0,-5.41854,-61.9817 0/1:17:14,3:14:541:3:112:-5.32823,0,-43.9165 0/1:30:25,5:25:915:5:190:-8.4364,0,-73.6281 0/0:42:42,0:42:1565:0:0:0,-12.6433,-141.119 0/0:33:33,0:33:1279:0:0:0,-9.93399,-115.398 dDocent_Contig_10700 94 . G A 734.237 . AB=0.430556;ABP=6.02623;AC=2;AF=0.2;AN=10;AO=33;CIGAR=1X;DP=119;DPB=119;DPRA=3.50877;EPP=74.6689;EPPR=189.757;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.988372;PAO=0;PQA=0;PQR=0;PRO=0;QA=1159;QR=3102;RO=86;RPL=33;RPP=74.6689;RPPR=189.757;RPR=0;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=86;SRP=189.757;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:22,19:22:780:19:668:-48.1037,0,-58.1815 0/1:31:19,12:19:670:12:418:-28.6209,0,-51.2949 0/0:6:6,0:6:221:0:0:0,-1.80618,-20.2468 0/0:28:26,2:26:952:2:73:0,-1.49754,-79.0673 ./.:.:.:.:.:.:.:. 0/0:13:13,0:13:479:0:0:0,-3.91339,-43.4537 dDocent_Contig_10701 110 . C A 82.0236 . AB=0;ABP=0;AC=4;AF=0.333333;AN=12;AO=12;CIGAR=1X;DP=100;DPB=100;DPRA=0.5;EPP=29.068;EPPR=194.1;GTI=0;LEN=1;MEANALT=1;MQM=9;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=392;QR=3038;RO=88;RPL=0;RPP=29.068;RPPR=194.1;RPR=12;RUN=1;SAF=0;SAP=29.068;SAR=12;SRF=0;SRP=194.1;SRR=88;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:22,2:22:768:2:70:0,-5.51653,-67.7341 0/0:40:40,0:40:1377:0:0:0,-12.0412,-124.23 0/0:17:16,1:16:555:1:36:0,-4.21827,-49.3789 1/1:6:0,6:0:0:6:199:-4.94007,-1.80618,0 1/1:3:0,3:0:0:3:87:-2.48379,-0.90309,0 0/0:10:10,0:10:338:0:0:0,-3.0103,-30.7472 dDocent_Contig_10702 27 . G A 470.877 . AB=0.0869565;ABP=37.093;AC=3;AF=0.25;AN=12;AO=16;CIGAR=1X;DP=130;DPB=130;DPRA=2.71429;EPP=37.7539;EPPR=250.558;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=637;QR=4425;RO=114;RPL=0;RPP=37.7539;RPPR=250.558;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=114;SRP=250.558;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:732:0:0:0,-5.71957,-66.2074 0/0:59:58,1:58:2238:1:41:0,-13.6662,-197.522 0/0:15:15,0:15:587:0:0:0,-4.51545,-53.1702 0/1:23:21,2:21:829:2:82:-0.855988,0,-68.0042 0/0:1:1,0:1:39:0:0:0,-0.30103,-3.89656 1/1:13:0,13:0:0:13:514:-46.605,-3.91339,0 dDocent_Contig_10703 95 . T C 53.5722 . AB=0.210526;ABP=16.8392;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=251;DPB=251;DPRA=0.409483;EPP=11.6962;EPPR=539.364;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=133;QR=8797;RO=247;RPL=4;RPP=11.6962;RPPR=539.364;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=247;SRP=539.364;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:15,4:15:521:4:133:-6.57907,0,-41.4966 0/0:54:54,0:54:1939:0:0:0,-16.2556,-174.785 0/0:57:57,0:57:2034:0:0:0,-17.1587,-183.332 0/0:63:63,0:63:2240:0:0:0,-18.9649,-201.859 0/0:13:13,0:13:458:0:0:0,-3.91339,-41.5541 0/0:45:45,0:45:1605:0:0:0,-13.5463,-144.74 dDocent_Contig_10705 1 . N G 64.5902 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=68;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10706 11 . G A 501.142 . AB=0.307692;ABP=23.8898;AC=2;AF=0.2;AN=10;AO=20;CIGAR=1X;DP=129;DPB=129;DPRA=1.52344;EPP=46.4397;EPPR=239.701;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.972477;PAO=0;PQA=0;PQR=0;PRO=0;QA=803;QR=4235;RO=109;RPL=0;RPP=46.4397;RPPR=239.701;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=109;SRP=239.701;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1126:0:0:0,-8.42884,-101.625 0/1:34:26,8:26:991:8:312:-18.2062,0,-79.2464 0/0:29:29,0:29:1150:0:0:0,-8.72987,-103.78 0/1:31:19,12:19:697:12:491:-35.209,0,-53.7021 ./.:.:.:.:.:.:.:. 0/0:7:7,0:7:271:0:0:0,-2.10721,-24.7492 dDocent_Contig_10707 107 . N G 770.516 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=25;CIGAR=1X;DP=25;DPB=25;DPRA=0;EPP=57.2971;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0.96;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=840;QR=0;RO=0;RPL=0;RPP=57.2971;RPPR=0;RPR=25;RUN=1;SAF=0;SAP=57.2971;SAR=25;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:19:0,19:0:0:19:645:-58.3696,-5.71957,0 1/1:4:0,4:0:0:4:126:-11.6517,-1.20412,0 dDocent_Contig_10711 33 . C T 166.377 . AB=0.133333;ABP=125.626;AC=3;AF=0.25;AN=12;AO=16;CIGAR=1X;DP=244;DPB=244;DPRA=1.0443;EPP=37.7539;EPPR=498.106;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.875;PAIREDR=0.850877;PAO=0;PQA=0;PQR=0;PRO=0;QA=638;QR=9081;RO=228;RPL=0;RPP=37.7539;RPPR=498.106;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=228;SRP=498.106;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:39,0:39:1549:0:0:0,-11.7402,-139.647 0/0:40:40,0:40:1606:0:0:0,-12.0412,-144.77 0/0:60:58,2:58:2290:2:73:0,-11.1326,-199.331 0/1:36:33,3:33:1313:3:122:-0.535413,0,-107.593 0/1:34:28,6:28:1124:6:240:-11.7401,0,-91.2078 0/1:35:30,5:30:1199:5:203:-8.11701,0,-97.6503 dDocent_Contig_10712 10 . G A 1556.27 . AB=0.308824;ABP=67.7713;AC=5;AF=0.416667;AN=12;AO=64;CIGAR=1X;DP=251;DPB=251;DPRA=0;EPP=141.985;EPPR=409.076;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.203125;PAIREDR=0.919786;PAO=0;PQA=0;PQR=0;PRO=0;QA=2527;QR=7448;RO=187;RPL=0;RPP=141.985;RPPR=409.076;RPR=64;RUN=1;SAF=64;SAP=141.985;SAR=0;SRF=187;SRP=409.076;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:38,4:38:1506:4:150:-1.22086,0,-123.145 0/1:73:43,30:43:1715:30:1171:-83.6972,0,-132.599 0/1:28:22,6:22:884:6:241:-13.6363,0,-71.4408 0/1:37:21,16:21:849:16:643:-47.0662,0,-65.5844 0/1:24:17,7:17:653:7:281:-18.4375,0,-51.8613 0/0:47:46,1:46:1841:1:41:0,-10.0538,-161.807 dDocent_Contig_10713 35 . T C 5183.3 . AB=0.390593;ABP=53.8512;AC=6;AF=0.5;AN=12;AO=191;CIGAR=1X;DP=489;DPB=489;DPRA=0;EPP=417.762;EPPR=645.766;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.993243;PAO=0;PQA=0;PQR=0;PRO=0;QA=7500;QR=11749;RO=296;RPL=0;RPP=417.762;RPPR=645.766;RPR=191;RUN=1;SAF=191;SAP=417.762;SAR=0;SRF=296;SRP=645.766;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:29:18,10:18:706:10:400:-27.5207,0,-55.0287 0/1:84:42,41:42:1660:41:1647:-123.371,0,-124.547 0/1:42:15,27:15:606:27:1089:-85.6505,0,-42.2342 0/1:45:15,30:15:589:30:1199:-94.637,0,-39.802 0/1:153:122,31:122:4845:31:1208:-62.9477,0,-389.901 0/1:136:84,52:84:3343:52:1957:-135.425,0,-259.982 dDocent_Contig_10714 20 . T A 291.589 . AB=0.392857;ABP=5.80219;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=161;DPB=161;DPRA=0.992593;EPP=37.7539;EPPR=317.874;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.25;PAIREDR=0.627586;PAO=0;PQA=0;PQR=0;PRO=0;QA=640;QR=5776;RO=145;RPL=0;RPP=37.7539;RPPR=317.874;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=145;SRP=317.874;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:13,8:13:529:8:324:-23.2076,0,-41.6346 0/0:46:45,1:45:1782:1:41:0,-9.75281,-156.495 0/1:7:4,3:4:154:3:121:-9.17299,0,-12.1231 0/0:40:37,3:37:1479:3:122:0,-0.668707,-121.983 0/0:20:19,1:19:748:1:32:0,-2.82129,-64.4401 0/0:27:27,0:27:1084:0:0:0,-8.12781,-97.8454 dDocent_Contig_10715 19 . A G 140.062 . AB=0;ABP=0;AC=2;AF=0.2;AN=10;AO=4;CIGAR=1X;DP=51;DPB=51;DPRA=0.340426;EPP=11.6962;EPPR=105.07;GTI=0;LEN=1;MEANALT=1;MQM=45;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=150;QR=1832;RO=47;RPL=0;RPP=11.6962;RPPR=105.07;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=47;SRP=105.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:753:0:0:0,-5.71957,-68.0892 0/0:6:6,0:6:235:0:0:0,-1.80618,-21.5195 0/0:15:15,0:15:565:0:0:0,-4.51545,-51.1739 0/0:7:7,0:7:279:0:0:0,-2.10721,-25.4795 1/1:4:0,4:0:0:4:150:-13.6082,-1.20412,0 ./.:.:.:.:.:.:.:. dDocent_Contig_10716 7 . T C 12017.9 . AB=0.545692;ABP=16.9009;AC=6;AF=0.5;AN=12;AO=418;CIGAR=1X;DP=766;DPB=766;DPRA=0;EPP=910.686;EPPR=756.511;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.992823;PAIREDR=0.994236;PAO=0;PQA=0;PQR=0;PRO=0;QA=16026;QR=13233;RO=347;RPL=0;RPP=910.686;RPPR=756.511;RPR=418;RUN=1;SAF=418;SAP=910.686;SAR=0;SRF=347;SRP=756.511;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:85:33,52:33:1266:52:2000:-154.651,0,-88.6452 0/1:112:31,81:31:1173:81:3128:-247.956,0,-72.1532 0/1:164:116,47:116:4406:47:1807:-113.639,0,-347.368 0/1:139:47,92:47:1797:92:3510:-274.187,0,-120.141 0/1:77:42,35:42:1615:35:1344:-98.0648,0,-122.436 0/1:189:78,111:78:2976:111:4237:-324.515,0,-211.115 dDocent_Contig_10717 40 . G A 148.602 . AB=0.173077;ABP=51.2838;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=294;DPB=294;DPRA=1.07438;EPP=22.5536;EPPR=621.88;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.992982;PAO=0;PQA=0;PQR=0;PRO=0;QA=352;QR=11139;RO=285;RPL=0;RPP=22.5536;RPPR=621.88;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=285;SRP=621.88;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:46:46,0:46:1812:0:0:0,-13.8474,-163.298 0/0:60:60,0:60:2349:0:0:0,-18.0618,-211.56 0/0:65:65,0:65:2565:0:0:0,-19.5669,-230.992 0/0:30:30,0:30:1176:0:0:0,-9.0309,-106.116 0/1:52:43,9:43:1685:9:352:-16.3831,0,-136.217 0/0:41:41,0:41:1552:0:0:0,-12.3422,-139.91 dDocent_Contig_10718 20 . T A 4105.54 . AB=0.475983;ABP=4.15767;AC=8;AF=0.666667;AN=12;AO=109;CIGAR=1X3M;DP=229;DPB=229;DPRA=0;EPP=190.454;EPPR=141.985;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=0.880734;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4290;QR=2468;RO=64;RPL=0;RPP=239.701;RPPR=141.985;RPR=109;RUN=1;SAF=103;SAP=190.454;SAR=6;SRF=64;SRP=141.985;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:20:10,8,2:10:389:8,2:310,77:-22.4578,0,-29.5613,-19.1465,-25.6481,-50.5115 0|1:71:25,17,29:25:984:17,29:636,1128:-85.1694,-40.6291,-116.456,0,-28.89,-72.2237 0|1:20:6,3,10:6:226:3,10:117,406:-31.6882,-23.8802,-41.482,0,-8.8851,-15.4953 0|1:51:23,6,22:23:869:6,22:237,859:-63.6834,-51.1038,-120.51,0,-51.6995,-64.5827 1|1:42:0,13,29:0:0:13,29:512,1137:-136.004,-93.8833,-89.9699,-42.514,0,-33.7841 1|1:25:0,8,17:0:0:8,17:317,683:-82.7732,-56.6822,-54.274,-26.4885,0,-21.371 dDocent_Contig_10719 26 . G T 162.77 . AB=0.195652;ABP=40.0197;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=4X;DP=111;DPB=111;DPRA=7.42857;EPP=31.2394;EPPR=198.797;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.7143;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.744898;PAO=0;PQA=0;PQR=0;PRO=0;QA=519;QR=3786;RO=98;RPL=0;RPP=31.2394;RPPR=215.815;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=96;SRP=198.797;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:22:18,4:18:679:4:162:-8.3443,0,-54.8097 0|0:29:27,2:27:1039:2:77:0,-1.42073,-86.4924 0|0:29:27,2:27:1043:2:80:0,-1.13808,-86.5674 0|1:24:19,5:19:751:5:200:-11.1543,0,-60.5017 0|0:4:4,0:4:154:0:0:0,-1.20412,-14.2324 0|0:3:3,0:3:120:0:0:0,-0.90309,-11.1877 dDocent_Contig_10720 72 . C A 359.1 . AB=0.291667;ABP=30.1537;AC=3;AF=0.375;AN=8;AO=21;CIGAR=1X;DP=84;DPB=84;DPRA=2;EPP=48.6112;EPPR=139.813;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.5397;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.968254;PAO=0;PQA=0;PQR=0;PRO=0;QA=689;QR=2094;RO=63;RPL=21;RPP=48.6112;RPPR=139.813;RPR=0;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=63;SRP=139.813;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:11:7,4:7:205:4:136:-9.26436,0,-15.4256 0/1:35:27,8:27:917:8:265:-13.6382,0,-72.306 0/0:12:12,0:12:401:0:0:0,-3.61236,-36.4122 0/1:26:17,9:17:571:9:288:-18.4054,0,-43.1022 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10721 13 . T C 2567.75 . AB=0.444444;ABP=8.55962;AC=6;AF=0.5;AN=12;AO=92;CIGAR=1X;DP=207;DPB=207;DPRA=0;EPP=202.786;EPPR=252.73;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.706522;PAIREDR=0.704348;PAO=0;PQA=0;PQR=0;PRO=0;QA=3648;QR=4535;RO=115;RPL=0;RPP=202.786;RPPR=252.73;RPR=92;RUN=1;SAF=92;SAP=202.786;SAR=0;SRF=115;SRP=252.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:11,21:11:438:21:820:-64.4711,0,-30.1411 0/1:47:28,19:28:1108:19:752:-53.8474,0,-85.8559 0/1:25:6,19:6:230:19:751:-60.3795,0,-13.5345 0/1:42:25,17:25:996:17:695:-50.2339,0,-77.289 0/1:26:14,12:14:564:12:466:-34.4507,0,-43.2753 0/1:35:31,4:31:1199:4:164:-4.61385,0,-97.6491 dDocent_Contig_10722 19 . C A 50.1524 . AB=0.142857;ABP=34.0313;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=166;DPB=166;DPRA=1.01449;EPP=11.6962;EPPR=329.214;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.598765;PAO=0;PQA=0;PQR=0;PRO=0;QA=162;QR=6502;RO=162;RPL=0;RPP=11.6962;RPPR=354.789;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=159;SRP=329.214;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:566:0:0:0,-4.21442,-51.2811 0/1:28:24,4:24:928:4:162:-6.53812,0,-75.3929 0/0:30:30,0:30:1221:0:0:0,-9.0309,-110.158 0/0:32:32,0:32:1282:0:0:0,-9.63296,-115.645 0/0:33:33,0:33:1333:0:0:0,-9.93399,-120.229 0/0:29:29,0:29:1172:0:0:0,-8.72987,-105.756 dDocent_Contig_10723 45 . G A 40.6244 . AB=0.129032;ABP=40.0654;AC=2;AF=0.166667;AN=12;AO=4;CIGAR=1X;DP=76;DPB=76;DPRA=1.37778;EPP=11.6962;EPPR=159.356;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.736111;PAO=0;PQA=0;PQR=0;PRO=0;QA=159;QR=2882;RO=72;RPL=0;RPP=11.6962;RPPR=159.356;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=72;SRP=159.356;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:13:12,1:12:477:1:41:-0.181177,0,-39.3658 0/1:18:15,3:15:611:3:118:-5.58418,0,-49.9084 0/0:7:7,0:7:273:0:0:0,-2.10721,-24.9319 0/0:14:14,0:14:567:0:0:0,-4.21442,-51.3723 0/0:9:9,0:9:360:0:0:0,-2.70927,-32.7606 0/0:15:15,0:15:594:0:0:0,-4.51545,-53.7962 dDocent_Contig_10724 8 . G T 815.84 . AB=0.0595238;ABP=286.129;AC=5;AF=0.416666;AN=12;AO=10;CIGAR=4X4M1X2M1X2M1X5M;DP=240;DPB=239.9;DPRA=0;EPP=24.725;EPPR=61.6401;GTI=0;LEN=1;MEANALT=13.75;MQM=30.7;MQMR=60;NS=6;NUMALT=9;ODDS=5.55112e-17;PAIRED=0.9;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=307;QR=1058;RO=27;RPL=0;RPP=24.725;RPPR=61.6401;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=27;SRP=61.6401;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:32:6,2,1,5,0,0,5,0,2,0:6:237:2,1,5,0,0,5,0,2,0:18,33,165,0,0,147,0,76,0:-10.1931,-11.4891,-30.4126,-9.5997,-28.6166,-28.827,0,-19.0246,-17.135,-18.0285,-11.9993,-31.0146,-29.128,-19.5337,-31.5265,-11.9993,-31.0146,-29.128,-19.5337,-31.5265,-31.5265,-1.62241,-20.6457,-18.7558,-9.16188,-21.1542,-21.1542,-19.649,-11.9993,-31.0146,-29.128,-19.5337,-31.5265,-31.5265,-21.1542,-31.5265,-5.75674,-24.7763,-22.8888,-13.2933,-25.2875,-25.2875,-14.9143,-25.2875,-24.6855,-11.9993,-31.0146,-29.128,-19.5337,-31.5265,-31.5265,-21.1542,-31.5265,-25.2875,-31.5265 0|0:59:6,8,6,4,4,2,5,0,5,2:6:237:8,6,4,4,2,5,0,5,2:72,198,132,152,66,163,0,181,66:-12.9755,-12.7113,-29.8158,-0.389291,-17.8377,-18.1001,-5.18687,-22.6331,-10.3123,-23.4991,-2.30755,-19.7535,-7.43301,-12.2303,-20.6205,-9.98434,-27.4285,-15.1094,-19.9063,-17.0275,-28.898,-2.88857,-20.3359,-8.01428,-12.8113,-9.93213,-17.6083,-20.9001,-14.7817,-32.224,-19.9063,-24.7032,-21.8246,-29.5001,-22.4052,-34.2969,0,-17.447,-5.12571,-9.92301,-7.04382,-14.7202,-7.62485,-19.5174,-18.0123,-9.98434,-27.4285,-15.1094,-19.9063,-17.0275,-24.7032,-17.6083,-29.5001,-14.7202,-28.898 0|1:15:5,5,0,3,0,0,0,1,0,1:5:196:5,0,3,0,0,0,1,0,1:45,0,99,0,0,0,39,0,33:-5.73627,-6.05168,-20.7016,-7.24142,-22.2067,-23.4267,0,-15.0358,-16.2216,-15.3185,-7.24142,-22.2067,-23.4267,-16.2216,-23.4267,-7.24142,-22.2067,-23.4267,-16.2216,-23.4267,-23.4267,-7.24142,-22.2067,-23.4267,-16.2216,-23.4267,-23.4267,-23.4267,-4.01647,-19.0001,-20.2144,-13.0058,-20.2144,-20.2144,-20.2144,-19.9134,-7.24142,-22.2067,-23.4267,-16.2216,-23.4267,-23.4267,-23.4267,-20.2144,-23.4267,-4.83109,-19.8147,-21.0255,-13.8187,-21.0255,-21.0255,-21.0255,-17.8123,-21.0255,-20.7245 0|0:40:6,4,2,5,0,0,3,1,5,0:6:231:4,2,5,0,0,3,1,5,0:36,66,165,0,0,87,39,193,0:-14.0695,-14.8455,-32.6282,-11.0756,-29.0351,-29.4637,-3.87461,-21.839,-18.0689,-21.3627,-15.8757,-33.8323,-30.0657,-22.8679,-34.864,-15.8757,-33.8323,-30.0657,-22.8679,-34.864,-34.864,-9.75784,-27.7186,-23.9498,-16.7516,-28.7483,-28.7483,-27.8452,-12.6683,-30.6265,-26.8594,-19.6611,-31.6579,-31.6579,-25.5419,-31.3569,0,-17.9653,-14.1961,-6.99573,-18.9958,-18.9958,-12.8784,-15.7887,-17.4906,-15.8757,-33.8323,-30.0657,-22.8679,-34.864,-34.864,-28.7483,-31.6579,-18.9958,-34.864 1|0:56:3,5,0,8,0,3,3,5,5,6:3:117:5,0,8,0,3,3,5,5,6:45,0,264,0,97,99,195,189,175:-24.6031,-24.2127,-32.3296,-25.5062,-33.8347,-35.1291,-6.31947,-14.6532,-15.9434,-13.5351,-25.5062,-33.8347,-35.1291,-15.9434,-35.1291,-18.4117,-26.742,-28.0349,-8.84916,-28.0349,-27.1319,-18.3112,-26.6415,-27.9345,-8.74866,-27.9345,-20.8403,-27.0314,-9.56345,-17.8946,-19.1875,0,-19.1875,-12.0927,-11.9923,-17.6823,-10.0048,-18.336,-19.6287,-0.441439,-19.6287,-12.5341,-12.4336,-3.68526,-18.1236,-13.1711,-21.5036,-22.7944,-3.60939,-22.7944,-15.7005,-15.6,-6.85206,-7.29345,-20.9883 1|1:38:1,3,5,7,0,0,2,3,3,1:1:40:3,5,7,0,0,2,3,3,1:27,165,231,0,0,66,113,115,33:-25.1736,-24.706,-27.1,-13.4854,-16.018,-15.278,-8.68992,-11.2245,0,-9.88062,-25.4746,-28.0031,-16.7832,-11.9878,-28.7721,-25.4746,-28.0031,-16.7832,-11.9878,-28.7721,-28.7721,-20.6789,-23.2088,-11.9878,-7.19258,-23.9765,-23.9765,-23.3744,-16.2158,-18.7461,-7.52399,-2.72827,-19.5136,-19.5136,-14.7177,-18.6105,-16.0294,-18.5597,-7.33752,-2.54175,-19.3272,-19.3272,-14.5313,-10.0676,-18.4241,-23.0767,-25.6059,-14.3855,-9.59018,-26.3742,-26.3742,-21.5787,-17.1156,-16.9292,-26.0732 dDocent_Contig_10725 137 . A G 722.545 . AB=0.0769231;ABP=43.4331;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=2X6M1X9M;DP=104;DPB=104;DPRA=0;EPP=3.73412;EPPR=124.613;GTI=0;LEN=1;MEANALT=3;MQM=58.6667;MQMR=60;NS=6;NUMALT=7;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=111;QR=1961;RO=56;RPL=0;RPP=9.52472;RPPR=124.613;RPR=3;RUN=1;SAF=1;SAP=3.73412;SAR=2;SRF=0;SRP=124.613;SRR=56;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:9:6,2,0,0,0,0,0,0:6:210:2,0,0,0,0,0,0:70,0,0,0,0,0,0:-3.87452,0,-16.4669,-5.6807,-17.069,-22.7624,-5.6807,-17.069,-22.7624,-22.7624,-5.6807,-17.069,-22.7624,-22.7624,-22.7624,-5.6807,-17.069,-22.7624,-22.7624,-22.7624,-22.7624,-5.6807,-17.069,-22.7624,-22.7624,-22.7624,-22.7624,-22.7624,-5.6807,-17.069,-22.7624,-22.7624,-22.7624,-22.7624,-22.7624,-22.7624 0|1:26:20,0,0,1,2,0,2,0:20:707:0,0,1,2,0,2,0:0,0,13,76,0,68,0:-0.239486,-6.26009,-63.8731,-6.26009,-63.8731,-63.8731,-5.69457,-63.2749,-63.2749,-62.9738,0,-57.6432,-57.6432,-57.0456,-57.0411,-6.26009,-63.8731,-63.8731,-63.2749,-57.6432,-63.8731,-0.730835,-58.3575,-58.3575,-57.7602,-52.1274,-58.3575,-57.7555,-6.26009,-63.8731,-63.8731,-63.2749,-57.6432,-63.8731,-58.3575,-63.8731 0|0:27:20,1,0,0,0,0,0,4:20:693:1,0,0,0,0,0,4:35,0,0,0,0,0,140:-5.37095,-8.54357,-64.5653,-11.3915,-64.8663,-67.7141,-11.3915,-64.8663,-67.7141,-67.7141,-11.3915,-64.8663,-67.7141,-67.7141,-67.7141,-11.3915,-64.8663,-67.7141,-67.7141,-67.7141,-67.7141,-11.3915,-64.8663,-67.7141,-67.7141,-67.7141,-67.7141,-67.7141,0,-53.4761,-56.324,-56.324,-56.324,-56.324,-56.324,-55.1198 0|0:22:10,4,0,3,0,3,0,0:10:351:4,0,3,0,3,0,0:140,0,39,0,102,0,0:-8.42624,0,-27.4448,-11.4365,-28.649,-40.0483,-9.66292,-26.8619,-38.2553,-37.3522,-11.4365,-28.649,-40.0483,-38.2553,-40.0483,-3.95281,-21.1796,-32.5819,-30.7943,-32.5819,-31.6788,-11.4365,-28.649,-40.0483,-38.2553,-40.0483,-32.5819,-40.0483,-11.4365,-28.649,-40.0483,-38.2553,-40.0483,-32.5819,-40.0483,-40.0483 0|0:5:0,2,2,0,0,0,0,0:0:0:2,2,0,0,0,0,0:74,70,0,0,0,0,0:-11.8604,-5.78207,-5.18001,-6.15291,0,-5.55085,-11.8604,-5.78207,-6.15291,-11.8604,-11.8604,-5.78207,-6.15291,-11.8604,-11.8604,-11.8604,-5.78207,-6.15291,-11.8604,-11.8604,-11.8604,-11.8604,-5.78207,-6.15291,-11.8604,-11.8604,-11.8604,-11.8604,-11.8604,-5.78207,-6.15291,-11.8604,-11.8604,-11.8604,-11.8604,-11.8604 0|0:15:0,14,0,0,1,0,0,0:0:0:14,0,0,1,0,0,0:555,0,0,35,0,0,0:-49.9416,-4.21442,0,-49.9416,-4.21442,-49.9416,-49.9416,-4.21442,-49.9416,-49.9416,-47.0972,-1.01717,-47.0972,-47.0972,-46.7962,-49.9416,-4.21442,-49.9416,-49.9416,-47.0972,-49.9416,-49.9416,-4.21442,-49.9416,-49.9416,-47.0972,-49.9416,-49.9416,-49.9416,-4.21442,-49.9416,-49.9416,-47.0972,-49.9416,-49.9416,-49.9416 dDocent_Contig_10726 16 . A C 66.7845 . AB=0.12069;ABP=75.4926;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=288;DPB=288;DPRA=1.26087;EPP=18.2106;EPPR=613.194;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.569395;PAO=0;PQA=0;PQR=0;PRO=0;QA=281;QR=11158;RO=281;RPL=0;RPP=18.2106;RPPR=613.194;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=281;SRP=613.194;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1269:0:0:0,-9.93399,-114.476 0/0:63:63,0:63:2508:0:0:0,-18.9649,-225.863 0/0:39:39,0:39:1543:0:0:0,-11.7402,-139.108 0/1:58:51,7:51:2037:7:281:-8.20133,0,-166.06 0/0:63:63,0:63:2531:0:0:0,-18.9649,-227.924 0/0:32:32,0:32:1270:0:0:0,-9.63296,-114.568 dDocent_Contig_10727 8 . G A 2113.77 . AB=0.28483;ABP=132.902;AC=4;AF=0.333333;AN=12;AO=92;CIGAR=1X;DP=416;DPB=416;DPRA=1.73656;EPP=202.786;EPPR=706.567;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3495;QR=12350;RO=324;RPL=0;RPP=202.786;RPPR=706.567;RPR=92;RUN=1;SAF=92;SAP=202.786;SAR=0;SRF=324;SRP=706.567;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:57:29,28:29:1108:28:1063:-78.8185,0,-82.8649 0/1:125:99,26:99:3786:26:987:-51.5115,0,-303.218 0/1:76:46,30:46:1774:30:1136:-79.6624,0,-137.035 0/1:65:57,8:57:2187:8:309:-8.60602,0,-177.486 0/0:42:42,0:42:1595:0:0:0,-12.6433,-143.819 0/0:51:51,0:51:1900:0:0:0,-15.3525,-171.249 dDocent_Contig_10728 7 . T A 166.816 . AB=0.166667;ABP=66.7068;AC=1;AF=0.1;AN=10;AO=11;CIGAR=1X;DP=258;DPB=258;DPRA=1.375;EPP=26.8965;EPPR=539.364;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=420;QR=9433;RO=247;RPL=0;RPP=26.8965;RPPR=539.364;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=247;SRP=539.364;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:76:76,0:76:2901:0:0:0,-22.8783,-261.261 0/1:66:55,11:55:2109:11:420:-18.2836,0,-170.173 0/0:42:42,0:42:1602:0:0:0,-12.6433,-144.439 0/0:68:68,0:68:2593:0:0:0,-20.47,-233.569 ./.:.:.:.:.:.:.:. 0/0:6:6,0:6:228:0:0:0,-1.80618,-20.8835 dDocent_Contig_10729 9 . A T 517.885 . AB=0.265957;ABP=47.7334;AC=2;AF=0.166667;AN=12;AO=26;CIGAR=1X2M1X3M1I1X1M1X;DP=189;DPB=191.6;DPRA=2.25862;EPP=59.4686;EPPR=356.96;GTI=0;LEN=1;MEANALT=1;MQM=51.3462;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.653846;PAIREDR=0.460123;PAO=0;PQA=0;PQR=0;PRO=0;QA=989;QR=6370;RO=163;RPL=0;RPP=59.4686;RPPR=356.96;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=163;SRP=356.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:12:12,0:12:467:0:0:0,-3.61236,-42.381 0|0:37:36,1:36:1405:1:35:0,-7.93907,-123.524 0|0:16:16,0:16:637:0:0:0,-4.81648,-57.6677 0|0:30:30,0:30:1180:0:0:0,-9.0309,-106.491 0|1:42:34,8:34:1307:8:294:-12.6107,0,-105.267 0|1:52:35,17:35:1374:17:660:-42.3996,0,-108.278 dDocent_Contig_10730 61 . G A 984.369 . AB=0.198413;ABP=102.553;AC=8;AF=0.666667;AN=12;AO=40;CIGAR=1X;DP=141;DPB=141;DPRA=0;EPP=89.8692;EPPR=222.329;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1571;QR=3993;RO=101;RPL=40;RPP=89.8692;RPPR=222.329;RPR=0;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=101;SRP=222.329;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:48:43,5:43:1714:5:198:-3.74703,0,-140.037 0/1:23:16,7:16:625:7:278:-18.4656,0,-49.6566 0/1:23:16,7:16:641:7:282:-18.8289,0,-51.1005 0/1:32:26,6:26:1013:6:241:-12.4331,0,-81.8342 1/1:7:0,7:0:0:7:255:-23.2908,-2.10721,0 1/1:8:0,8:0:0:8:317:-28.8921,-2.40824,0 dDocent_Contig_10731 15 . A T 232.467 . AB=0.27027;ABP=19.9713;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=186;DPB=186;DPRA=1.35135;EPP=26.8965;EPPR=383.018;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.818182;PAIREDR=0.514286;PAO=0;PQA=0;PQR=0;PRO=0;QA=436;QR=6988;RO=175;RPL=0;RPP=26.8965;RPPR=383.018;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=175;SRP=383.018;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:1147:0:0:0,-8.72987,-103.513 0/1:37:27,10:27:1089:10:395:-24.7696,0,-87.1558 0/0:33:33,0:33:1325:0:0:0,-9.93399,-119.509 0/0:38:37,1:37:1467:1:41:0,-7.34457,-128.182 0/0:25:25,0:25:995:0:0:0,-7.52575,-89.8451 0/0:24:24,0:24:965:0:0:0,-7.22472,-87.1511 dDocent_Contig_10732 90 . T A 264.834 . AB=0;ABP=0;AC=2;AF=0.2;AN=10;AO=12;CIGAR=1X;DP=203;DPB=203;DPRA=0.326705;EPP=29.068;EPPR=417.762;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.895288;PAO=0;PQA=0;PQR=0;PRO=0;QA=431;QR=6748;RO=191;RPL=12;RPP=29.068;RPPR=417.762;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=191;SRP=417.762;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:27,1:27:958:1:35:0,-4.93021,-83.0379 0/0:88:88,0:88:3076:0:0:0,-26.4906,-277.068 0/0:28:26,2:26:950:2:73:0,-1.49754,-78.8864 0/0:51:50,1:50:1764:1:37:0,-11.6547,-155.345 ./.:.:.:.:.:.:.:. 1/1:8:0,8:0:0:8:286:-26.0854,-2.40824,0 dDocent_Contig_10733 8 . G A 98.3108 . AB=0.25;ABP=13.8677;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=155;DPB=155;DPRA=0.740741;EPP=13.8677;EPPR=328.731;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8133;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.373333;PAO=0;PQA=0;PQR=0;PRO=0;QA=189;QR=5687;RO=150;RPL=0;RPP=13.8677;RPPR=328.731;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=150;SRP=328.731;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1247:0:0:0,-9.93399,-112.491 0/0:34:34,0:34:1285:0:0:0,-10.235,-115.94 0/1:20:15,5:15:571:5:189:-11.354,0,-45.7073 0/0:36:36,0:36:1367:0:0:0,-10.8371,-123.289 0/0:14:14,0:14:540:0:0:0,-4.21442,-48.9452 0/0:18:18,0:18:677:0:0:0,-5.41854,-61.2598 dDocent_Contig_10735 12 . C A 750.547 . AB=0.169884;ABP=248.169;AC=3;AF=0.25;AN=12;AO=52;CIGAR=1X;DP=567;DPB=567;DPRA=0;EPP=115.927;EPPR=1121.32;GTI=0;LEN=1;MEANALT=1;MQM=59.1923;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.95534;PAO=0;PQA=0;PQR=0;PRO=0;QA=2063;QR=20606;RO=515;RPL=0;RPP=115.927;RPPR=1121.32;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=515;SRP=1121.32;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:55:46,9:46:1849:9:352:-15.4806,0,-150.056 0/0:129:127,2:127:5063:2:81:0,-31.1471,-447.852 0/0:86:83,3:83:3326:3:115:0,-15.267,-288.762 0/0:93:90,3:90:3614:3:120:0,-16.8947,-314.168 0/1:104:88,16:88:3511:16:637:-26.3575,0,-284.707 0/1:100:81,19:81:3243:19:758:-38.4384,0,-261.829 dDocent_Contig_10736 128 . C T 1209.54 . AB=0.428571;ABP=8.28388;AC=3;AF=0.25;AN=12;AO=51;CIGAR=1X;DP=134;DPB=134;DPRA=7.93333;EPP=113.755;EPPR=183.243;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1789;QR=2880;RO=83;RPL=0;RPP=113.755;RPPR=183.243;RPR=51;RUN=1;SAF=0;SAP=113.755;SAR=51;SRF=0;SRP=183.243;SRR=83;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:5:5,0:5:169:0:0:0,-1.50515,-15.5415 0/1:40:15,25:15:536:25:867:-66.3051,0,-36.5339 0/1:36:24,12:24:822:12:424:-27.6596,0,-63.4563 0/1:43:29,14:29:1003:14:498:-32.2114,0,-77.6332 0/0:8:8,0:8:277:0:0:0,-2.40824,-25.2654 0/0:2:2,0:2:73:0:0:0,-0.60206,-6.9313 dDocent_Contig_10737 8 . G T 1506.93 . AB=0.352941;ABP=34.9437;AC=4;AF=0.333333;AN=12;AO=60;CIGAR=1X;DP=260;DPB=260;DPRA=0.944444;EPP=133.299;EPPR=435.133;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.95;PAIREDR=0.974874;PAO=0;PQA=0;PQR=0;PRO=0;QA=2309;QR=7623;RO=199;RPL=0;RPP=133.299;RPPR=435.133;RPR=60;RUN=1;SAF=60;SAP=133.299;SAR=0;SRF=199;SRP=435.133;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:27:15,12:15:573:12:468:-34.3447,0,-43.7815 0/1:49:36,13:36:1379:13:493:-29.9655,0,-109.636 0/1:52:37,14:37:1412:14:546:-33.7442,0,-111.616 0/1:42:21,21:21:812:21:802:-59.8604,0,-60.7618 0/0:57:57,0:57:2184:0:0:0,-17.1587,-196.78 0/0:33:33,0:33:1263:0:0:0,-9.93399,-113.962 dDocent_Contig_10739 14 . T C 1179.08 . AB=0.255924;ABP=112.191;AC=5;AF=0.416667;AN=12;AO=54;CIGAR=1X;DP=246;DPB=246;DPRA=1.20571;EPP=120.27;EPPR=419.933;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.648148;PAIREDR=0.473958;PAO=0;PQA=0;PQR=0;PRO=0;QA=2099;QR=7081;RO=192;RPL=0;RPP=120.27;RPPR=419.933;RPR=54;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=192;SRP=419.933;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1289:0:0:0,-10.536,-116.301 0/1:56:46,10:46:1699:10:398:-19.3226,0,-136.319 0/1:32:27,5:27:1009:5:195:-8.28929,0,-81.4854 0/1:51:42,9:42:1546:9:316:-13.4143,0,-124.062 0/1:29:24,5:24:866:5:196:-9.28497,0,-69.5258 0/1:43:18,25:18:672:25:994:-76.8188,0,-47.8686 dDocent_Contig_10740 130 . C T 107.777 . AB=0.269231;ABP=15.0369;AC=2;AF=0.25;AN=8;AO=7;CIGAR=1X;DP=41;DPB=41;DPRA=1.73333;EPP=18.2106;EPPR=76.8404;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=237;QR=1197;RO=34;RPL=0;RPP=18.2106;RPPR=76.8404;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=76.8404;SRR=34;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:13:9,4:9:310:4:128:-7.92097,0,-24.3185 0/0:8:8,0:8:285:0:0:0,-2.40824,-25.9922 0/1:13:10,3:10:355:3:109:-6.25461,0,-28.3749 0/0:7:7,0:7:247:0:0:0,-2.10721,-22.5726 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10741 33 . T G 543.368 . AB=0.175439;ABP=159.471;AC=2;AF=0.166667;AN=12;AO=30;CIGAR=1X;DP=441;DPB=441;DPRA=1.26667;EPP=68.1545;EPPR=891.143;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.933333;PAIREDR=0.97555;PAO=0;PQA=0;PQR=0;PRO=0;QA=1204;QR=14892;RO=409;RPL=0;RPP=68.1545;RPPR=891.143;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=409;SRP=891.143;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:50,0:50:1829:0:0:0,-15.0515,-164.857 0/0:41:41,0:41:1489:0:0:0,-12.3422,-134.283 0/0:83:83,0:83:3040:0:0:0,-24.9855,-273.766 0/0:96:94,0:94:3451:0:0:0,-28.2968,-310.628 0/1:81:71,10:71:2510:10:407:-12.6072,0,-201.721 0/1:90:70,20:70:2573:20:797:-44.9515,0,-204.664 dDocent_Contig_10742 8 . G C 258.842 . AB=0.189873;ABP=69.0066;AC=1;AF=0.0833333;AN=12;AO=22;CIGAR=1X;DP=484;DPB=484;DPRA=0.66323;EPP=50.7827;EPPR=1001.89;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9109;NS=6;NUMALT=1;ODDS=0;PAIRED=0.818182;PAIREDR=0.967391;PAO=0;PQA=0;PQR=0;PRO=0;QA=838;QR=17568;RO=460;RPL=0;RPP=50.7827;RPPR=1001.89;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=460;SRP=1001.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:56,3:56:2135:3:117:0,-6.85039,-181.469 0/1:79:64,15:64:2459:15:565:-27.4071,0,-197.729 0/0:55:51,4:51:1964:4:156:0,-2.13936,-162.579 0/0:72:70,0:70:2652:0:0:0,-21.0721,-238.478 0/0:76:76,0:76:2899:0:0:0,-22.8783,-261.039 0/0:143:143,0:143:5459:0:0:0,-43.0473,-491.296 dDocent_Contig_10744 19 . G A 376.156 . AB=0.175182;ABP=128.559;AC=5;AF=0.416667;AN=12;AO=24;CIGAR=1X;DP=153;DPB=153;DPRA=1.7125;EPP=55.1256;EPPR=283.13;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.791667;PAIREDR=0.728682;PAO=0;PQA=0;PQR=0;PRO=0;QA=952;QR=5140;RO=129;RPL=0;RPP=55.1256;RPPR=283.13;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=129;SRP=283.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:5:2,3:2:81:3:121:-9.77505,0,-6.18058 0/1:33:30,3:30:1209:3:123:-1.5308,0,-99.1478 0/0:16:16,0:16:639:0:0:0,-4.81648,-57.8415 0/1:20:17,3:17:659:3:121:-5.2596,0,-53.6144 0/1:34:29,5:29:1172:5:203:-8.41804,0,-95.5227 0/1:45:35,10:35:1380:10:384:-21.3608,0,-110.911 dDocent_Contig_10745 7 . T C 136.936 . AB=0.157143;ABP=74.4828;AC=2;AF=0.166667;AN=12;AO=18;CIGAR=1X;DP=270;DPB=270;DPRA=2.2;EPP=42.0968;EPPR=550.221;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=687;QR=9680;RO=252;RPL=0;RPP=42.0968;RPPR=550.221;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=252;SRP=550.221;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:31,0:31:1199:0:0:0,-9.33193,-108.207 0/0:78:73,5:73:2799:5:195:0,-5.55614,-234.164 0/0:19:19,0:19:727:0:0:0,-5.71957,-65.761 0/1:45:38,7:38:1469:7:259:-10.1158,0,-118.94 0/0:72:70,2:70:2689:2:78:0,-14.2707,-234.793 0/1:25:21,4:21:797:4:155:-6.79969,0,-64.5282 dDocent_Contig_10746 24 . G T 3503.86 . AB=0.478599;ABP=4.03267;AC=6;AF=0.5;AN=12;AO=123;CIGAR=1X;DP=257;DPB=257;DPRA=0;EPP=270.101;EPPR=289.645;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.422764;PAIREDR=0.454545;PAO=0;PQA=0;PQR=0;PRO=0;QA=4854;QR=5043;RO=132;RPL=0;RPP=270.101;RPPR=289.645;RPR=123;RUN=1;SAF=123;SAP=270.101;SAR=0;SRF=132;SRP=289.645;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:27:12,15:12:456:15:594:-45.6693,0,-33.2571 0/1:60:28,32:28:1081:32:1250:-94.7157,0,-79.5266 0/1:41:31,10:31:1181:10:401:-24.1072,0,-94.2412 0/1:50:26,24:26:1009:24:947:-70.4817,0,-76.0657 0/1:36:20,16:20:751:16:635:-46.6466,0,-57.0648 0/1:43:15,26:15:565:26:1027:-79.9873,0,-38.4458 dDocent_Contig_10747 11 . C A 555.483 . AB=0.0277778;ABP=72.7387;AC=0;AF=0;AN=10;AO=4;CIGAR=2X1M1X2M1X3M;DP=128;DPB=128;DPRA=7.2;EPP=11.6962;EPPR=185.414;GTI=0;LEN=1;MEANALT=4;MQM=29;MQMR=60;NS=5;NUMALT=4;ODDS=0;PAIRED=0;PAIREDR=0.988095;PAO=0;PQA=0;PQR=0;PRO=0;QA=116;QR=3298;RO=84;RPL=0;RPP=11.6962;RPPR=185.414;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=84;SRP=185.414;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:36:26,3,2,0,2:26:1026:3,2,0,2:87,80,0,74:0,-1.73439,-85.2947,-2.07637,-80.4592,-85.9611,-7.82678,-86.1977,-86.5632,-92.3025,-1.7584,-80.1445,-80.5093,-86.2485,-85.6465 0|0:29:14,0,0,3,10:14:551:0,0,3,10:0,0,122,390:-27.8398,-32.0542,-77.3818,-32.0542,-77.3818,-77.3818,-22.1362,-67.4652,-67.4652,-66.5621,0,-45.326,-45.326,-35.4091,-42.3157 0|0:36:28,1,0,0,7:28:1112:1,0,0,7:29,0,0,274:-14.2142,-20.6211,-111.87,-22.643,-112.171,-114.205,-22.643,-112.171,-114.205,-114.205,0,-89.6438,-91.6773,-91.6773,-89.5701 0|0:22:11,0,1,3,7:11:419:0,1,3,7:0,40,104,269:-18.7952,-22.1066,-56.4792,-19.2382,-53.6101,-53.3091,-13.709,-48.0769,-45.2083,-47.1738,0,-34.3924,-31.5236,-25.992,-32.2852 .:.:.:.:.:.:.:. 0|0:5:5,0,0,0,0:5:190:0,0,0,0:0,0,0,0:0,-1.50515,-17.4644,-1.50515,-17.4644,-17.4644,-1.50515,-17.4644,-17.4644,-17.4644,-1.50515,-17.4644,-17.4644,-17.4644,-17.4644 dDocent_Contig_10748 168 . C G 798.36 . AB=0.41791;ABP=6.93191;AC=2;AF=0.25;AN=8;AO=28;CIGAR=1X;DP=87;DPB=87;DPRA=3.35;EPP=63.8115;EPPR=128.956;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1139;QR=2318;RO=58;RPL=28;RPP=63.8115;RPPR=128.956;RPR=0;RUN=1;SAF=0;SAP=63.8115;SAR=28;SRF=0;SRP=128.956;SRR=58;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:6:6,0:6:235:0:0:0,-1.80618,-21.5193 0/1:50:26,23:26:1047:23:934:-69.5165,0,-79.6769 0/0:14:14,0:14:555:0:0:0,-4.21442,-50.2915 0/1:17:12,5:12:481:5:205:-13.7175,0,-38.5218 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10749 63 . C T 777.405 . AB=0.176829;ABP=300.555;AC=2;AF=0.166667;AN=12;AO=81;CIGAR=1X;DP=896;DPB=896;DPRA=0;EPP=153.807;EPPR=1768.42;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=59.5203;NS=6;NUMALT=1;ODDS=0;PAIRED=0.444444;PAIREDR=0.453875;PAO=0;PQA=0;PQR=0;PRO=0;QA=2746;QR=28208;RO=813;RPL=45;RPP=5.18177;RPPR=205;RPR=36;RUN=1;SAF=48;SAP=9.04217;SAR=33;SRF=544;SRP=205;SRR=269;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:133:129,3:129:4472:3:107:0,-29.8954,-391.206 0/0:199:187,11:187:6465:11:355:0,-27.4332,-543.117 0/0:102:97,5:97:3357:5:181:0,-14.0616,-285.694 0/1:228:185,43:185:6384:43:1489:-65.659,0,-503.454 0/0:134:130,4:130:4499:4:113:0,-29.8886,-393.083 0/1:100:85,15:85:3031:15:501:-15.3033,0,-240.925 dDocent_Contig_10750 40 . C T 381.468 . AB=0.352941;ABP=12.5903;AC=4;AF=0.333333;AN=12;AO=19;CIGAR=1X;DP=86;DPB=86;DPRA=3.24;EPP=44.2683;EPPR=148.499;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=697;QR=2511;RO=67;RPL=0;RPP=44.2683;RPPR=148.499;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=67;SRP=148.499;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:9:4,5:4:154:5:188:-14.5739,0,-11.5242 0/1:8:5,3:5:189:3:101:-7.01467,0,-14.967 0/0:30:29,1:29:1067:1:38:0,-5.23363,-92.5407 0/1:22:16,6:16:608:6:226:-14.0795,0,-48.4341 0/1:12:8,4:8:303:4:144:-9.70052,0,-24.0165 0/0:5:5,0:5:190:0:0:0,-1.50515,-17.4667 dDocent_Contig_10751 10 . A G 393.296 . AB=0.615385;ABP=4.51363;AC=5;AF=0.416667;AN=12;AO=18;CIGAR=1X4I2M1X1M1X3M1X1M1X;DP=28;DPB=54.9167;DPRA=1.2;EPP=42.0968;EPPR=0;GTI=0;LEN=1;MEANALT=1.8;MQM=13.3889;MQMR=0;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0;PAO=99.5;PQA=3977.5;PQR=76;PRO=2;QA=660;QR=0;RO=0;RPL=0;RPP=42.0968;RPPR=0;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:4:0,3,1:0:0:3,1:100,32:-7.97882,-1.09241,-0.189321,-7.22459,0,-6.92356 0|1:2:0,1,1:0:0:1,1:34,37:-2.48012,-1.09689,-0.795855,-3.09788,0,-2.79685 1|1:8:0,0,8:0:0:0,8:0,296:-9.73071,-9.73071,-9.73071,-2.40824,-2.40824,0 0|0:3:0,1,2:0:0:1,2:35,74:-3.0617,-0.30103,0,-2.5435,-0.0742782,-1.94144 0|0:4:0,4,0:0:0:4,0:132,0:-10.1746,-1.20412,0,-10.1746,-1.20412,-10.1746 0|1:7:0,1,6:0:0:1,6:34,221:-7.37849,-4.62775,-4.32672,-3.09788,0,-1.2917 dDocent_Contig_10752 44 . G T 77.8599 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=5;CIGAR=1X;DP=84;DPB=84;DPRA=1.04878;EPP=13.8677;EPPR=174.557;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.911392;PAO=0;PQA=0;PQR=0;PRO=0;QA=195;QR=3119;RO=79;RPL=0;RPP=13.8677;RPPR=174.557;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=79;SRP=174.557;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:25,2:25:1002:2:81:0,-0.442076,-82.7907 0/0:19:19,0:19:732:0:0:0,-5.71957,-66.1943 0/0:16:16,0:16:631:0:0:0,-4.81648,-57.1181 0/0:14:13,1:13:512:1:37:0,-0.516591,-42.7231 1/1:2:0,2:0:0:2:77:-7.3082,-0.60206,0 0/0:6:6,0:6:242:0:0:0,-1.80618,-22.1569 dDocent_Contig_10754 7 . T C 18118.6 . AB=0.747492;ABP=321.164;AC=11;AF=0.916666;AN=12;AO=551;CIGAR=1X1M;DP=710;DPB=710;DPRA=0;EPP=1182.18;EPPR=146.452;GTI=0;LEN=1;MEANALT=3;MQM=59.7405;MQMR=59.6571;NS=6;NUMALT=3;ODDS=0;PAIRED=0.961887;PAIREDR=0.828571;PAO=0;PQA=0;PQR=0;PRO=0;QA=21071;QR=2666;RO=70;RPL=0;RPP=1199.49;RPPR=155.013;RPR=551;RUN=1;SAF=549;SAP=1182.18;SAR=2;SRF=69;SRP=146.452;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:115:12,25,0,78:12:459:25,0,78:960,0,3006:-284.366,-209.173,-239.312,-287.979,-246.838,-325.643,-41.1422,0,-78.8067,-55.3264 0|1:181:32,7,7,135:32:1214:7,7,135:270,269,5184:-415.906,-403.366,-500.802,-403.456,-480.826,-500.892,0,-77.3663,-77.4559,-58.9011 1|1:87:2,13,0,71:2:78:13,0,71:498,0,2687:-254.2,-213.93,-216.429,-254.802,-220.342,-261.214,-34.5279,0,-40.943,-19.5699 1|1:141:9,16,4,111:9:344:16,4,111:615,156,4259:-369.14,-321.361,-344.771,-359.025,-336.764,-386.048,-22.2634,0,-37.6651,-17.0754 1|1:112:5,0,2,104:5:191:0,2,104:0,78,3973:-339.609,-341.114,-356.785,-334.702,-350.374,-349.772,-15.6403,-31.3071,-24.8937,0 1|1:74:10,0,10,52:10:380:0,10,52:0,384,1962:-157.846,-160.856,-191.751,-129.333,-160.228,-157.218,-0.632256,-31.5241,0,-15.8705 dDocent_Contig_10756 29 . G T 38.7064 . AB=0.119048;ABP=55.9529;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=295;DPB=295;DPRA=1.0068;EPP=26.8965;EPPR=619.708;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.454545;PAIREDR=0.514085;PAO=0;PQA=0;PQR=0;PRO=0;QA=430;QR=11199;RO=284;RPL=0;RPP=26.8965;RPPR=619.708;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=284;SRP=619.708;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:37,5:37:1443:5:193:-5.09243,0,-117.481 0/0:54:54,0:54:2149:0:0:0,-16.2556,-193.593 0/0:51:49,2:49:1937:2:82:0,-7.57285,-166.75 0/0:55:51,4:51:2033:4:155:0,-2.23318,-168.842 0/0:35:35,0:35:1388:0:0:0,-10.536,-125.183 0/0:58:58,0:58:2249:0:0:0,-17.4597,-202.585 dDocent_Contig_10757 97 . C T 130.214 . AB=0.375;ABP=5.18177;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=91;DPB=91;DPRA=1.19298;EPP=18.2106;EPPR=185.414;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=240;QR=2899;RO=84;RPL=7;RPP=18.2106;RPPR=185.414;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=84;SRP=185.414;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:10,6:10:348:6:208:-14.2432,0,-26.8396 0/0:31:31,0:31:1075:0:0:0,-9.33193,-97.0607 0/0:18:17,1:17:578:1:32:0,-2.21923,-49.1426 0/0:16:16,0:16:549:0:0:0,-4.81648,-49.7358 0/0:6:6,0:6:209:0:0:0,-1.80618,-19.1511 0/0:4:4,0:4:140:0:0:0,-1.20412,-12.9449 dDocent_Contig_10758 20 . C T 406.215 . AB=0.357143;ABP=10.4553;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=588;DPB=588;DPRA=0.384615;EPP=35.5824;EPPR=799.333;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=55.9336;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.888112;PAO=0;PQA=0;PQR=0;PRO=0;QA=605;QR=22848;RO=572;RPL=0;RPP=35.5824;RPPR=1245.09;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=515;SRP=799.333;SRR=57;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:95:94,0:94:3744:0:0:0,-28.2968,-321.927 0/0:72:72,0:72:2821:0:0:0,-21.6742,-230.576 0/0:78:78,0:78:3113:0:0:0,-23.4803,-270.559 0/0:62:62,0:62:2455:0:0:0,-18.6639,-193.575 0/1:42:27,15:27:1083:15:605:-42.1444,0,-79.64 0/0:239:239,0:239:9632:0:0:0,-71.9462,-862.716 dDocent_Contig_10759 112 . C G 412.344 . AB=0.349206;ABP=15.4532;AC=6;AF=0.5;AN=12;AO=22;CIGAR=1X;DP=63;DPB=63;DPRA=0;EPP=50.7827;EPPR=92.0407;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.97561;PAO=0;PQA=0;PQR=0;PRO=0;QA=770;QR=1386;RO=41;RPL=0;RPP=50.7827;RPPR=92.0407;RPR=22;RUN=1;SAF=0;SAP=50.7827;SAR=22;SRF=0;SRP=92.0407;SRR=41;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:7:5,2:5:174:2:70:-4.54019,0,-13.8947 0/1:17:10,7:10:319:7:245:-17.2737,0,-23.901 0/1:13:11,2:11:384:2:70:-2.73401,0,-30.9822 0/1:4:3,1:3:103:1:35:-2.29451,0,-8.4059 0/1:12:4,8:4:139:8:280:-21.9276,0,-9.24033 0/1:10:8,2:8:267:2:70:-3.6371,0,-21.3453 dDocent_Contig_10760 75 . A G 2009.51 . AB=0.376569;ABP=34.6375;AC=6;AF=0.5;AN=12;AO=90;CIGAR=1X;DP=239;DPB=239;DPRA=0;EPP=198.443;EPPR=326.56;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.577778;PAIREDR=0.536913;PAO=0;PQA=0;PQR=0;PRO=0;QA=3132;QR=5213;RO=149;RPL=90;RPP=198.443;RPPR=326.56;RPR=0;RUN=1;SAF=90;SAP=198.443;SAR=0;SRF=149;SRP=326.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:23,8:23:795:8:266:-14.9294,0,-62.5341 0/1:41:25,16:25:868:16:562:-38.5667,0,-66.0932 0/1:27:24,3:24:858:3:106:-1.76108,0,-69.4115 0/1:45:27,18:27:944:18:623:-42.8468,0,-71.7281 0/1:28:12,16:12:425:16:566:-42.8419,0,-30.1582 0/1:67:38,29:38:1323:29:1009:-70.9479,0,-99.198 dDocent_Contig_10763 58 . T A 328.586 . AB=0.34375;ABP=9.79615;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=5M1X6M;DP=137;DPB=137.333;DPRA=2;EPP=26.8965;EPPR=259.244;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.466102;PAO=0;PQA=0;PQR=0;PRO=0;QA=436;QR=4420;RO=118;RPL=11;RPP=26.8965;RPPR=259.244;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=118;SRP=259.244;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:6:6,0,0:6:226:0,0:0,0:0,-1.80618,-20.7027,-1.80618,-20.7027,-20.7027 0|1:32:21,0,11:21:795:0,11:0,436:-29.96,-36.2816,-101.448,0,-65.5566,-62.2452 0|0:13:12,0,0:12:453:0,0:0,0:0,-3.61236,-40.7581,-3.61236,-40.7581,-40.7581 0|0:21:20,0,0:20:746:0,0:0,0:0,-6.0206,-67.3271,-6.0206,-67.3271,-67.3271 0|0:24:24,0,0:24:891:0,0:0,0:0,-7.22472,-80.5096,-7.22472,-80.5096,-80.5096 0|0:41:35,5,0:35:1309:5,0:202,0:-6.12044,0,-105.666,-16.6565,-107.171,-123.828 dDocent_Contig_10764 12 . A T 1944.24 . AB=0.847222;ABP=78.4086;AC=1;AF=0.1;AN=10;AO=61;CIGAR=7X;DP=130;DPB=130;DPRA=4.96552;EPP=135.47;EPPR=152.842;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2417;QR=2690;RO=69;RPL=0;RPP=135.47;RPPR=152.842;RPR=61;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=69;SRP=152.842;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:19:19,0:19:742:0:0:0,-5.71957,-67.108 0|0:27:27,0:27:1046:0:0:0,-8.12781,-94.44 0|0:2:2,0:2:77:0:0:0,-0.60206,-7.30914 .:.:.:.:.:.:.:. 0|1:72:11,61:11:441:61:2417:-196.026,0,-18.3723 0|0:10:10,0:10:384:0:0:0,-3.0103,-34.9143 dDocent_Contig_10765 8 . C T 443.284 . AB=0.322581;ABP=19.9618;AC=4;AF=0.333333;AN=12;AO=20;CIGAR=1X;DP=85;DPB=85;DPRA=1.34783;EPP=46.4397;EPPR=144.156;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.938462;PAO=0;PQA=0;PQR=0;PRO=0;QA=764;QR=2451;RO=65;RPL=0;RPP=46.4397;RPPR=144.156;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=65;SRP=144.156;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:11,12:11:408:12:467:-35.4587,0,-30.1406 0/1:13:11,2:11:427:2:78:-3.49008,0,-34.8717 0/1:13:10,3:10:367:3:117:-6.99699,0,-29.4617 0/1:13:10,3:10:377:3:102:-5.60219,0,-30.367 0/0:12:12,0:12:459:0:0:0,-3.61236,-41.6588 0/0:11:11,0:11:413:0:0:0,-3.31133,-37.5165 dDocent_Contig_10766 27 . A T 192.061 . AB=0.11976;ABP=212.733;AC=1;AF=0.125;AN=8;AO=28;CIGAR=1X;DP=523;DPB=523;DPRA=1.28086;EPP=63.8115;EPPR=1077.89;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1092;QR=19681;RO=495;RPL=0;RPP=63.8115;RPPR=1077.89;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=495;SRP=1077.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:167:147,20:147:5883:20:784:-20.604,0,-478.99 0/0:108:108,0:108:4265:0:0:0,-32.5112,-383.827 0/0:148:141,7:141:5600:7:281:0,-18.8903,-478.175 0/0:100:99,1:99:3933:1:27:0,-27.4032,-351.273 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10767 55 . A C 527.62 . AB=0.153226;ABP=132.528;AC=7;AF=0.583333;AN=12;AO=27;CIGAR=1X;DP=175;DPB=175;DPRA=0;EPP=61.6401;EPPR=324.388;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1079;QR=5833;RO=148;RPL=27;RPP=61.6401;RPPR=324.388;RPR=0;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=148;SRP=324.388;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:49:43,6:43:1714:6:242:-7.40648,0,-139.736 0/1:55:46,9:46:1824:9:359:-16.1165,0,-147.814 0/0:44:43,1:43:1675:1:41:0,-9.15075,-146.876 0/1:20:16,4:16:620:4:161:-8.8543,0,-50.1102 1/1:1:0,1:0:0:1:40:-3.99568,-0.30103,0 1/1:6:0,6:0:0:6:236:-21.6105,-1.80618,0 dDocent_Contig_10768 195 . G A 6690.56 . AB=0;ABP=0;AC=4;AF=0.333333;AN=12;AO=198;CIGAR=1X;DP=557;DPB=557;DPRA=1.12045;EPP=432.962;EPPR=782.569;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7497;QR=13997;RO=359;RPL=198;RPP=432.962;RPPR=782.569;RPR=0;RUN=1;SAF=0;SAP=432.962;SAR=198;SRF=0;SRP=782.569;SRR=359;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:106:106,0:106:4124:0:0:0,-31.9092,-371.155 0/0:75:75,0:75:2920:0:0:0,-22.5772,-262.918 0/0:86:86,0:86:3334:0:0:0,-25.8886,-300.111 0/0:90:90,0:90:3549:0:0:0,-27.0927,-319.446 1/1:91:0,91:0:0:91:3459:-311.43,-27.3937,0 1/1:109:2,107:2:70:107:4038:-356.848,-26.1661,0 dDocent_Contig_10772 8 . C T 439.566 . AB=0.140625;ABP=290.188;AC=3;AF=0.25;AN=12;AO=41;CIGAR=1X;DP=369;DPB=369;DPRA=4.23077;EPP=92.0407;EPPR=715.253;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.926829;PAO=0;PQA=0;PQR=0;PRO=0;QA=1577;QR=12569;RO=328;RPL=0;RPP=92.0407;RPPR=715.253;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=328;SRP=715.253;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:49,5:49:1879:5:194:-1.57722,0,-153.101 0/1:117:102,15:102:3896:15:583:-17.5927,0,-315.521 0/0:74:69,5:69:2665:5:191:0,-4.7177,-222.479 0/1:85:69,16:69:2642:16:609:-29.5592,0,-212.387 0/0:13:13,0:13:497:0:0:0,-3.91339,-45.076 0/0:26:26,0:26:990:0:0:0,-7.82678,-89.4108 dDocent_Contig_10775 118 . C T 54.4819 . AB=0.166667;ABP=31.9633;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=226;DPB=226;DPRA=0.539326;EPP=16.0391;EPPR=478.563;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.196347;PAO=0;PQA=0;PQR=0;PRO=0;QA=209;QR=7263;RO=219;RPL=0;RPP=16.0391;RPPR=478.563;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=478.563;SRR=219;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:50,0:50:1641:0:0:0,-15.0515,-147.969 0/0:42:41,0:41:1375:0:0:0,-12.3422,-123.693 0/0:36:36,0:36:1226:0:0:0,-10.8371,-110.642 0/0:50:50,0:50:1649:0:0:0,-15.0515,-148.69 0/0:18:17,1:17:544:1:35:0,-1.91991,-45.7652 0/1:30:25,5:25:828:5:174:-6.97105,0,-65.7947 dDocent_Contig_10776 19 . G A 98.5115 . AB=0.135135;ABP=88.5781;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=428;DPB=428;DPRA=1.59394;EPP=39.9253;EPPR=895.485;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.985401;PAO=0;PQA=0;PQR=0;PRO=0;QA=603;QR=16428;RO=411;RPL=0;RPP=39.9253;RPPR=895.485;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=411;SRP=895.485;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:76:76,0:76:3011:0:0:0,-22.8783,-271.075 0/0:111:110,1:110:4393:1:11:0,-32.3143,-394.199 0/0:38:38,0:38:1534:0:0:0,-11.4391,-138.29 0/0:51:51,0:51:2056:0:0:0,-15.3525,-185.219 0/1:74:64,10:64:2539:10:370:-11.374,0,-206.363 0/0:78:72,6:72:2895:6:222:0,-3.14228,-240.304 dDocent_Contig_10778 21 . C T 545.384 . AB=0.133333;ABP=20.5268;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=1X2M1X3M1X6M1X;DP=98;DPB=98.9333;DPRA=0;EPP=7.35324;EPPR=124.613;GTI=0;LEN=1;MEANALT=6;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=1;PAIREDR=0.982143;PAO=0;PQA=0;PQR=0;PRO=0;QA=80;QR=2169;RO=56;RPL=0;RPP=7.35324;RPPR=124.613;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=56;SRP=124.613;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:27:17,0,0,1,6,3:17:651:0,0,1,6,3:0,0,38,236,109:-14.3111,-19.4286,-72.8511,-19.4286,-72.8511,-72.8511,-16.3139,-69.7361,-69.7361,-69.4351,0,-53.435,-53.435,-50.3199,-51.6288,-10.5401,-63.9566,-63.9566,-60.8417,-44.5408,-63.0535 0|0:25:16,0,0,6,1,2:16:624:0,0,6,1,2:0,0,236,41,81:-14.5758,-19.3923,-70.6787,-19.3923,-70.6787,-70.6787,0,-51.2773,-51.2773,-49.4712,-16.0067,-67.2939,-67.2939,-47.8923,-66.9929,-12.7111,-63.9985,-63.9985,-44.5967,-60.6136,-63.3964 0|0:14:10,0,0,1,0,3:10:391:0,0,1,0,3:0,0,41,0,123:-7.14218,-10.1525,-42.285,-10.1525,-42.285,-42.285,-6.77131,-38.9028,-38.9028,-38.6017,-10.1525,-42.285,-42.285,-38.9028,-42.285,0,-32.1291,-32.1291,-28.7462,-32.1291,-31.226 0|0:13:9,0,0,1,0,3:9:354:0,0,1,0,3:0,0,40,0,119:-7.0841,-9.79337,-38.9107,-9.79337,-38.9107,-38.9107,-6.49978,-35.6175,-35.6175,-35.3165,-9.79337,-38.9107,-38.9107,-35.6175,-38.9107,0,-29.1145,-29.1145,-25.821,-29.1145,-28.2114 0|1:4:3,1,0,0,0,0:3:113:1,0,0,0,0:40,0,0,0,0:-2.79156,0,-9.33367,-3.69465,-9.6347,-12.9356,-3.69465,-9.6347,-12.9356,-12.9356,-3.69465,-9.6347,-12.9356,-12.9356,-12.9356,-3.69465,-9.6347,-12.9356,-12.9356,-12.9356,-12.9356 0|0:15:1,3,2,4,1,3:1:36:3,2,4,1,3:103,80,160,40,120:-19.8418,-11.7882,-13.8219,-13.5464,-8.12823,-15.8821,-6.96591,-1.5466,-3.30292,-8.70036,-16.8449,-11.4269,-13.1855,-6.60427,-19.4813,-10.2474,-4.82874,-6.58587,0,-9.8861,-12.2824 dDocent_Contig_10779 73 . C A 128.132 . AB=0.454545;ABP=3.20771;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=114;DPB=114;DPRA=0.961039;EPP=18.2106;EPPR=235.358;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.962617;PAO=0;PQA=0;PQR=0;PRO=0;QA=267;QR=4030;RO=107;RPL=7;RPP=18.2106;RPPR=235.358;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=107;SRP=235.358;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:11:11,0:11:402:0:0:0,-3.31133,-36.5192 0/0:26:24,2:24:887:2:75:0,-0.707187,-73.0223 0/0:19:19,0:19:731:0:0:0,-5.71957,-66.114 0/0:9:9,0:9:328:0:0:0,-2.70927,-29.8631 0/0:38:38,0:38:1447:0:0:0,-11.4391,-130.5 0/1:11:6,5:6:235:5:192:-14.3359,0,-18.2098 dDocent_Contig_10780 17 . A T 777.858 . AB=0.102941;ABP=375.482;AC=1;AF=0.0833333;AN=12;AO=29;CIGAR=1X2M;DP=313;DPB=313;DPRA=0;EPP=65.983;EPPR=526.335;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1169;QR=9579;RO=241;RPL=0;RPP=65.983;RPPR=526.335;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=241;SRP=526.335;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:23:16,0,1,1,5:16:616:0,1,1,5:0,41,41,189:-10.6537,-15.4701,-66.0309,-12.0823,-62.6457,-62.3447,-12.0823,-62.6457,-59.2604,-62.3447,0,-50.5402,-47.1548,-47.1548,-49.035 0|0:41:40,0,1,0,0:40:1599:0,1,0,0:0,41,0,0:0,-12.0412,-143.739,-8.24766,-140.355,-140.053,-12.0412,-143.739,-140.355,-143.739,-12.0412,-143.739,-140.355,-143.739,-143.739 0|0:55:48,0,1,6,0:48:1905:0,1,6,0:0,41,245,0:-5.76463,-20.2141,-177.018,-16.8298,-173.634,-173.333,0,-156.801,-153.417,-154.995,-20.2141,-177.018,-173.634,-156.801,-177.018 0|0:43:25,0,6,12,0:25:1000:0,6,12,0:0,244,437,0:-28.1262,-35.652,-118.036,-15.5114,-97.9072,-96.101,0,-82.3663,-62.2386,-78.754,-35.652,-118.036,-97.9072,-82.3663,-118.036 0|1:97:69,0,18,9,0:69:2734:0,18,9,0:0,720,339,0:-38.5707,-59.3418,-284.368,0,-225.058,-219.639,-31.5762,-256.602,-197.291,-253.893,-59.3418,-284.368,-225.058,-256.602,-284.368 0|0:54:43,4,2,5,0:43:1725:4,2,5,0:157,82,204,0:-3.89147,-3.92949,-144.847,-10.066,-139.283,-151.592,0,-129.22,-135.362,-140.626,-16.8358,-146.052,-152.194,-142.131,-158.963 dDocent_Contig_10781 25 . A G 4986.95 . AB=0.614504;ABP=32.8473;AC=2;AF=0.166667;AN=12;AO=161;CIGAR=1X;DP=564;DPB=564;DPRA=1.7351;EPP=352.617;EPPR=871.599;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.98;PAO=0;PQA=0;PQR=0;PRO=0;QA=6452;QR=15604;RO=400;RPL=0;RPP=352.617;RPPR=871.599;RPR=161;RUN=1;SAF=161;SAP=352.617;SAR=0;SRF=400;SRP=871.599;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:99:96,0:96:3698:0:0:0,-28.8989,-332.472 0/0:76:76,0:76:2964:0:0:0,-22.8783,-266.866 0/0:28:28,0:28:1097:0:0:0,-8.42884,-99.0183 0/0:99:99,0:99:3907:0:0:0,-29.802,-351.642 0/1:116:47,69:47:1830:69:2784:-215.741,0,-129.994 0/1:146:54,92:54:2108:92:3668:-286.176,0,-145.954 dDocent_Contig_10782 28 . A T 131.388 . AB=0.173913;ABP=45.4956;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=99;DPB=99;DPRA=1.73585;EPP=20.3821;EPPR=200.614;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.956044;PAO=0;PQA=0;PQR=0;PRO=0;QA=327;QR=3606;RO=91;RPL=0;RPP=20.3821;RPPR=200.614;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=91;SRP=200.614;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:17,5:17:681:5:205:-12.2123,0,-54.998 0/1:24:21,3:21:825:3:122:-4.14777,0,-67.3425 0/0:21:21,0:21:819:0:0:0,-6.32163,-74.022 0/0:20:20,0:20:798:0:0:0,-6.0206,-72.14 0/0:5:5,0:5:203:0:0:0,-1.50515,-18.6531 0/0:7:7,0:7:280:0:0:0,-2.10721,-25.5707 dDocent_Contig_10783 9 . T C 116.805 . AB=0.149254;ABP=74.6041;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X1M1X;DP=262;DPB=262;DPRA=1;EPP=31.2394;EPPR=543.707;GTI=0;LEN=1;MEANALT=1;MQM=43.3846;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.939759;PAO=0;PQA=0;PQR=0;PRO=0;QA=515;QR=9735;RO=249;RPL=0;RPP=31.2394;RPPR=543.707;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=249;SRP=543.707;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:35:35,0:35:1369:0:0:0,-10.536,-123.483 0|0:72:72,0:72:2814:0:0:0,-21.6742,-253.41 0|0:64:61,3:61:2397:3:120:0,-8.4734,-205.114 0|1:60:51,9:51:1974:9:355:-13.1876,0,-159.824 0|1:7:6,1:6:240:1:40:-1.34728,0,-19.869 0|0:24:24,0:24:941:0:0:0,-7.22472,-84.9995 dDocent_Contig_10784 141 . T C 31.0675 . AB=0.2;ABP=14.7363;AC=2;AF=0.166667;AN=12;AO=3;CIGAR=1X;DP=84;DPB=84;DPRA=0.434783;EPP=9.52472;EPPR=178.9;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.987654;PAO=0;PQA=0;PQR=0;PRO=0;QA=112;QR=2917;RO=81;RPL=0;RPP=9.52472;RPPR=178.9;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=178.9;SRR=81;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:4:3,1:3:114:1:35:-2.29451,0,-9.42786 0/0:10:10,0:10:368:0:0:0,-3.0103,-33.4648 0/0:31:31,0:31:1116:0:0:0,-9.33193,-100.728 0/0:11:11,0:11:409:0:0:0,-3.31133,-37.1551 0/1:11:9,2:9:325:2:77:-3.99781,0,-26.2824 0/0:17:17,0:17:585:0:0:0,-5.11751,-52.9652 dDocent_Contig_10785 87 . T C 1603.89 . AB=0.252226;ABP=182.714;AC=6;AF=0.6;AN=10;AO=87;CIGAR=1X;DP=339;DPB=339;DPRA=0;EPP=191.928;EPPR=548.05;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0.977011;PAIREDR=0.98008;PAO=0;PQA=0;PQR=0;PRO=0;QA=2973;QR=8618;RO=251;RPL=87;RPP=191.928;RPPR=548.05;RPR=0;RUN=1;SAF=87;SAP=191.928;SAR=0;SRF=251;SRP=548.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:57:43,14:43:1462:14:488:-27.093,0,-114.714 0/1:71:37,33:37:1280:33:1107:-78.4981,0,-94.0721 0/1:68:45,23:45:1559:23:786:-50.5859,0,-120.135 0/1:141:126,15:126:4317:15:522:-4.8649,0,-346.288 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 dDocent_Contig_10787 109 . T C 144.096 . AB=0.125;ABP=12.7819;AC=5;AF=0.416667;AN=12;AO=6;CIGAR=1X2M1X;DP=51;DPB=51;DPRA=0.378378;EPP=16.0391;EPPR=98.5551;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=184;QR=1474;RO=44;RPL=0;RPP=16.0391;RPPR=98.5551;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=98.5551;SRR=44;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:23:23,0:23:774:0:0:0,-6.92369,-69.9731 0|0:5:5,0:5:170:0:0:0,-1.50515,-15.6349 0|0:9:9,0:9:309:0:0:0,-2.70927,-28.1436 0|1:8:7,1:7:221:1:35:-1.09039,0,-17.7909 1|1:1:0,1:0:0:1:10:-0.999996,-0.30103,0 1|1:5:0,4:0:0:4:139:-12.6152,-1.20412,0 dDocent_Contig_10788 18 . C A 1157.17 . AB=0.0615385;ABP=111.551;AC=0;AF=0;AN=12;AO=4;CIGAR=1X2M1X2M1X;DP=325;DPB=325;DPRA=0;EPP=11.6962;EPPR=491.592;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.808889;PAO=0;PQA=0;PQR=0;PRO=0;QA=152;QR=8836;RO=225;RPL=0;RPP=11.6962;RPPR=491.592;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=225;SRP=491.592;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:44:27,0,4,2,10:27:1076:0,4,2,10:0,162,82,387:-23.6453,-31.7731,-120.382,-18.4115,-107.023,-105.819,-25.0028,-113.614,-100.254,-113.011,0,-88.6019,-75.2429,-81.8331,-85.5916 0|0:65:46,4,1,7,6:46:1808:4,1,7,6:152,40,279,219:-9.13645,-10.5199,-158.029,-19.6879,-155.938,-168.102,0,-136.257,-145.426,-146.614,-5.10609,-141.349,-150.519,-130.837,-152.008 0|0:35:25,0,7,1,2:25:997:0,7,1,2:0,261,38,81:-13.8226,-21.3483,-103.469,0,-82.1089,-80.0017,-18.2318,-100.353,-78.9931,-100.052,-14.663,-96.7888,-75.4292,-93.6727,-96.1868 0|0:65:50,0,2,5,8:50:1912:0,2,5,8:0,78,200,295:-9.04499,-24.0965,-180.955,-17.6842,-174.543,-173.941,-7.61229,-164.478,-158.067,-162.973,0,-156.845,-150.434,-140.368,-154.437 0|0:55:39,0,0,15,0:39:1531:0,0,15,0:0,0,588,0:-36.6117,-48.3519,-174.262,-48.3519,-174.262,-174.262,0,-125.912,-125.912,-121.397,-48.3519,-174.262,-174.262,-125.912,-174.262 0|0:61:38,0,1,15,7:38:1512:0,1,15,7:0,41,563,251:-34.6776,-46.1168,-170.629,-42.731,-167.245,-166.944,0,-124.523,-121.139,-120.008,-25.6608,-150.171,-146.787,-104.068,-148.064 dDocent_Contig_10790 12 . C T 5141.55 . AB=0.0941176;ABP=124.638;AC=0;AF=0;AN=12;AO=10;CIGAR=2X2M1X2M1X4M;DP=243;DPB=243;DPRA=0;EPP=24.725;EPPR=128.956;GTI=0;LEN=1;MEANALT=4.33333;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=395;QR=2276;RO=58;RPL=0;RPP=24.725;RPPR=128.956;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=58;SRP=128.956;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:28:16,0,10,2,0:16:627:0,10,2,0:0,374,78,0:-25.813,-30.6294,-82.1998,0,-51.5834,-48.5731,-24.6751,-76.2454,-45.6306,-75.6433,-30.6294,-82.1998,-51.5834,-76.2454,-82.1998 0|0:37:16,0,20,0,0:16:631:0,20,0,0:0,783,0,0:-59.6161,-64.4326,-116.352,0,-51.9773,-45.9567,-64.4326,-116.352,-51.9773,-116.352,-64.4326,-116.352,-51.9773,-116.352,-116.352 0|0:20:4,0,16,0,0:4:160:0,16,0,0:0,650,0,0:-52.8129,-54.017,-67.1961,0,-13.5799,-8.76341,-54.017,-67.1961,-13.5799,-67.1961,-54.017,-67.1961,-13.5799,-67.1961,-67.1961 0|0:24:6,5,12,0,1:6:235:5,12,0,1:190,487,0,40:-38.3721,-24.6066,-42.4208,0,-3.75443,-15.7154,-40.1783,-43.9259,-19.3278,-59.5003,-36.8831,-40.6309,-16.0316,-56.2051,-55.904 0|0:73:0,0,68,0,2:0:0:0,68,0,2:0,2701,0,75:-242.832,-242.832,-242.832,-20.47,-20.47,0,-242.832,-242.832,-20.47,-242.832,-236.69,-236.69,-14.3308,-236.69,-236.087 0|0:61:16,0,33,0,7:16:623:0,33,0,7:0,1320,0,280:-103.93,-108.747,-159.945,0,-51.2042,-41.2702,-108.747,-159.945,-51.2042,-159.945,-85.6804,-136.879,-28.1343,-136.879,-134.772 dDocent_Contig_10791 83 . A T 906.151 . AB=0;ABP=0;AC=2;AF=0.2;AN=10;AO=33;CIGAR=1X;DP=222;DPB=222;DPRA=0.662338;EPP=74.6689;EPPR=411.247;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1118;QR=6673;RO=188;RPL=33;RPP=74.6689;RPPR=411.247;RPR=0;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=188;SRP=411.247;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:45:45,0:45:1604:0:0:0,-13.5463,-144.651 0/0:87:87,0:87:3081:0:0:0,-26.1896,-277.52 0/0:33:31,1:31:1091:1:7:0,-9.14289,-97.659 0/0:22:22,0:22:789:0:0:0,-6.62266,-71.3352 ./.:.:.:.:.:.:.:. 1/1:35:3,32:3:108:32:1111:-90.2168,-0.46088,0 dDocent_Contig_10792 16 . C T 9997.72 . AB=0.367764;ABP=136.821;AC=2;AF=0.166667;AN=12;AO=324;CIGAR=1X2M1X4M;DP=1016;DPB=1016;DPRA=5.15205;EPP=706.567;EPPR=1169.09;GTI=0;LEN=1;MEANALT=4.66667;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=12893;QR=21126;RO=537;RPL=0;RPP=706.567;RPPR=1169.09;RPR=324;RUN=1;SAF=324;SAP=706.567;SAR=0;SRF=537;SRP=1169.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:51:40,0,0,4,7:40:1550:0,0,4,7:0,0,164,285:-11.4674,-23.5086,-150.815,-23.5086,-150.815,-150.815,-9.97121,-137.277,-137.277,-136.073,0,-127.302,-127.302,-113.764,-125.195 0|0:27:8,0,17,2,0:8:320:0,17,2,0:0,684,82,0:-53.957,-56.3652,-82.7245,0,-26.3523,-21.2348,-49.5962,-75.9557,-19.5822,-75.3537,-56.3652,-82.7245,-26.3523,-75.9557,-82.7245 0|0:79:63,5,0,9,2:63:2471:5,0,9,2:196,0,367,82:-11.3196,-14.171,-215.852,-30.2844,-217.357,-233.475,0,-187.076,-203.195,-200.485,-23.5153,-210.588,-226.706,-196.426,-226.104 0|0:57:50,0,2,1,4:50:1976:0,2,1,4:0,74,41,164:0,-15.0515,-177.652,-9.01059,-171.6,-170.998,-11.6655,-174.267,-168.216,-173.966,-1.50003,-164.114,-158.063,-160.73,-162.91 0|1:450:195,178,42,33,0:195:7667:178,42,33,0:7081,1655,1338,0:-524.305,0,-577.034,-446.858,-494.469,-1064.83,-472.667,-520.278,-967.136,-1093.35,-583.006,-630.617,-1077.47,-1103.28,-1213.62 0|1:352:181,141,10,17,0:181:7142:141,10,17,0:5616,397,677,0:-407.945,0,-545.178,-429.749,-554.941,-1014.36,-406.692,-531.883,-961.633,-989.198,-462.431,-587.623,-1017.37,-994.315,-1050.06 dDocent_Contig_10793 30 . C T 152.97 . AB=0.264706;ABP=19.3602;AC=4;AF=0.333333;AN=12;AO=10;CIGAR=1X;DP=57;DPB=57;DPRA=0.94;EPP=24.725;EPPR=105.07;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=374;QR=1865;RO=47;RPL=0;RPP=24.725;RPPR=105.07;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=47;SRP=105.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:16,3:16:650:3:110:-4.53767,0,-53.1137 0/1:9:7,2:7:279:2:77:-4.59893,0,-22.7714 0/0:10:10,0:10:380:0:0:0,-3.0103,-34.5434 0/0:13:12,1:12:475:1:27:0,-1.21361,-40.3981 0/1:4:1,3:1:40:3:122:-10.1684,0,-2.79156 0/1:2:1,1:1:41:1:38:-3.19521,0,-3.49251 dDocent_Contig_10794 51 . A T 68.2129 . AB=0.147541;ABP=68.8308;AC=4;AF=0.333333;AN=12;AO=10;CIGAR=2X;DP=97;DPB=97;DPRA=0.72381;EPP=24.725;EPPR=189.757;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.4;PAIREDR=0.825581;PAO=0;PQA=0;PQR=0;PRO=0;QA=372;QR=3407;RO=86;RPL=10;RPP=24.725;RPPR=189.757;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=86;SRP=189.757;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:26:22,4:22:870:4:133:-4.46614,0,-70.7846 0|1:16:14,2:14:543:2:81:-2.86925,0,-44.3856 0|1:9:8,1:8:320:1:41:-1.3853,0,-26.4579 0|0:21:21,0:21:841:0:0:0,-6.32163,-76.0037 0|0:15:14,1:14:559:1:35:0,-1.01682,-47.1536 0|1:10:7,2:7:274:2:82:-4.68077,0,-21.9336 dDocent_Contig_10795 24 . T G 1183.81 . AB=0.319728;ABP=44.5046;AC=5;AF=0.416667;AN=12;AO=47;CIGAR=1X;DP=169;DPB=169;DPRA=1.33636;EPP=105.07;EPPR=267.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.425532;PAIREDR=0.54918;PAO=0;PQA=0;PQR=0;PRO=0;QA=1889;QR=4583;RO=122;RPL=0;RPP=105.07;RPPR=267.93;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=122;SRP=267.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:17,7:17:637:7:282:-18.5279,0,-50.44 0/1:39:32,7:32:1211:7:287:-14.4651,0,-97.5427 0/1:21:9,12:9:322:12:488:-37.9497,0,-22.9954 0/1:33:15,18:15:578:18:710:-54.287,0,-42.4246 0/0:22:22,0:22:821:0:0:0,-6.62266,-74.2041 0/1:30:27,3:27:1014:3:122:-2.34159,0,-82.5364 dDocent_Contig_10796 79 . T C 934.595 . AB=0.411215;ABP=10.3365;AC=6;AF=0.5;AN=12;AO=44;CIGAR=1X;DP=107;DPB=107;DPRA=0;EPP=98.5551;EPPR=139.813;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1495;QR=2160;RO=63;RPL=44;RPP=98.5551;RPPR=139.813;RPR=0;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=63;SRP=139.813;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:6:5,1:5:170:1:35:-1.69245,0,-13.8284 0/1:21:11,10:11:383:10:348:-25.3343,0,-28.4834 0/1:29:20,9:20:692:9:310:-19.5042,0,-53.8729 0/1:23:15,8:15:514:8:279:-18.5253,0,-39.6628 0/1:17:7,10:7:236:10:319:-23.9009,0,-16.4525 0/1:11:5,6:5:165:6:204:-15.3824,0,-11.8637 dDocent_Contig_10798 11 . A G 2328.33 . AB=0.317518;ABP=82.2611;AC=6;AF=0.6;AN=10;AO=87;CIGAR=1X2M;DP=274;DPB=274;DPRA=0;EPP=191.928;EPPR=400.39;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=5;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3469;QR=7232;RO=183;RPL=0;RPP=191.928;RPPR=400.39;RPR=87;RUN=1;SAF=87;SAP=191.928;SAR=0;SRF=183;SRP=400.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:24:10,0,14:10:392:0,14:0,540:-41.7105,-44.7208,-76.959,0,-32.6272,-28.4128 0|1:93:54,0,39:54:2119:0,39:0,1572:-113.718,-129.974,-304.223,0,-174.647,-162.907 0|1:105:81,0,24:81:3214:0,24:0,956:-54.7335,-79.117,-343.686,0,-264.967,-257.742 0|1:43:37,0,6:37:1467:0,6:0,237:-8.75685,-19.895,-140.649,0,-121.149,-119.343 .:.:.:.:.:.:.:. 1|1:9:1,4,4:1:40:4,4:161,164:-23.2151,-10.2511,-12.3401,-9.97613,0,-12.0666 dDocent_Contig_10799 8 . C T 1211.29 . AB=0.128028;ABP=1044.98;AC=2;AF=0.166667;AN=12;AO=150;CIGAR=1X;DP=2323;DPB=2323;DPRA=0;EPP=320.103;EPPR=4333.51;GTI=0;LEN=1;MEANALT=1.83333;MQM=59.56;MQMR=57.8485;NS=6;NUMALT=1;ODDS=0;PAIRED=0.28;PAIREDR=0.650764;PAO=0;PQA=0;PQR=0;PRO=0;QA=5774;QR=83156;RO=2159;RPL=0;RPP=328.731;RPPR=4691.22;RPR=150;RUN=1;SAF=149;SAP=320.103;SAR=1;SRF=2117;SRP=4333.51;SRR=42;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:324:309,9:309:11874:9:344:0,-64.8032,-1031.39 0/0:428:413,13:413:15925:13:501:0,-83.1894,-1370.76 0/0:229:220,6:220:8506:6:230:0,-47.534,-732.888 0/0:475:463,11:463:17818:11:425:0,-105.255,-1552.19 0/1:447:375,72:375:14453:72:2761:-114.112,0,-1159.14 0/1:420:379,39:379:14580:39:1513:-10.2382,0,-1177.93 dDocent_Contig_10800 27 . C T 84.9309 . AB=0.285714;ABP=8.59409;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X1M1X;DP=101;DPB=101;DPRA=0.804598;EPP=11.6962;EPPR=213.643;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.958763;PAO=0;PQA=0;PQR=0;PRO=0;QA=154;QR=3822;RO=97;RPL=0;RPP=11.6962;RPPR=213.643;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=97;SRP=213.643;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:4:4,0:4:160:0:0:0,-1.20412,-14.7838 0|0:5:5,0:5:195:0:0:0,-1.50515,-17.9231 0|0:47:47,0:47:1841:0:0:0,-14.1484,-165.908 0|1:14:10,4:10:395:4:154:-10.0159,0,-31.6945 0|0:14:14,0:14:554:0:0:0,-4.21442,-50.204 0|0:17:17,0:17:677:0:0:0,-5.11751,-61.2605 dDocent_Contig_10801 82 . T C 2053.23 . AB=0.415525;ABP=16.5845;AC=4;AF=0.5;AN=8;AO=91;CIGAR=1X;DP=219;DPB=219;DPRA=0;EPP=200.614;EPPR=280.959;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3082;QR=4249;RO=128;RPL=91;RPP=200.614;RPPR=280.959;RPR=0;RUN=1;SAF=91;SAP=200.614;SAR=0;SRF=128;SRP=280.959;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:12,25:12:397:25:831:-63.9578,0,-24.9112 0/1:61:48,13:48:1550:13:453:-22.7399,0,-121.417 0/1:25:14,11:14:466:11:383:-27.2792,0,-34.7328 0/1:96:54,42:54:1836:42:1415:-98.7441,0,-136.625 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10804 107 . N C 1082.63 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=36;CIGAR=1X;DP=36;DPB=36;DPRA=0;EPP=81.1833;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1182;QR=0;RO=0;RPL=0;RPP=81.1833;RPPR=0;RPR=36;RUN=1;SAF=0;SAP=81.1833;SAR=36;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:139:-12.8527,-1.20412,0 1/1:8:0,8:0:0:8:234:-21.3471,-2.40824,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:11:0,11:0:0:11:373:-33.8982,-3.31133,0 1/1:13:0,13:0:0:13:436:-39.5626,-3.91339,0 dDocent_Contig_10805 80 . G A 512.267 . AB=0.68;ABP=10.0459;AC=1;AF=0.125;AN=8;AO=22;CIGAR=1X;DP=201;DPB=201;DPRA=1.45122;EPP=50.7827;EPPR=391.704;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=870;QR=6945;RO=179;RPL=22;RPP=50.7827;RPPR=391.704;RPR=0;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=179;SRP=391.704;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:1109:0:0:0,-8.72987,-100.085 0/0:94:89,5:89:3452:5:202:0,-9.73474,-292.178 0/0:53:53,0:53:2064:0:0:0,-15.9546,-185.947 0/1:25:8,17:8:320:17:668:-52.9256,0,-21.6419 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10806 10 . G A 3891.59 . AB=0.250373;ABP=366.19;AC=6;AF=0.5;AN=12;AO=168;CIGAR=1X;DP=671;DPB=671;DPRA=0;EPP=367.818;EPPR=1095.26;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.696429;PAIREDR=0.753479;PAO=0;PQA=0;PQR=0;PRO=0;QA=6674;QR=19519;RO=503;RPL=0;RPP=367.818;RPPR=1095.26;RPR=168;RUN=1;SAF=168;SAP=367.818;SAR=0;SRF=503;SRP=1095.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:161:112,49:112:4291:49:1967:-128.761,0,-337.738 0/1:127:96,31:96:3709:31:1211:-71.0272,0,-295.639 0/1:84:70,14:70:2755:14:563:-25.7266,0,-222.791 0/1:189:134,55:134:5218:55:2173:-138.855,0,-412.637 0/1:27:23,4:23:881:4:162:-6.83915,0,-71.4661 0/1:83:68,15:68:2665:15:598:-29.1725,0,-215.008 dDocent_Contig_10807 26 . G A 615.738 . AB=0.317647;ABP=27.5607;AC=6;AF=0.5;AN=12;AO=27;CIGAR=1X;DP=85;DPB=85;DPRA=0;EPP=61.6401;EPPR=126.784;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.703704;PAIREDR=0.877193;PAO=0;PQA=0;PQR=0;PRO=0;QA=1069;QR=2283;RO=57;RPL=0;RPP=61.6401;RPPR=126.784;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=57;SRP=126.784;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:10,2:10:406:2:82:-4.16732,0,-33.2872 0/1:11:6,4:6:243:4:156:-10.9983,0,-18.8285 0/1:11:8,3:8:318:3:122:-8.06116,0,-25.6719 0/1:19:12,7:12:471:7:264:-18.3956,0,-37.0116 0/1:9:7,2:7:282:2:80:-4.8823,0,-23.0433 0/1:23:14,9:14:563:9:365:-26.2903,0,-44.0894 dDocent_Contig_10808 31 . A T 31.8842 . AB=0.153846;ABP=30.0702;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=102;DPB=102;DPRA=1.71053;EPP=11.6962;EPPR=213.643;GTI=0;LEN=1;MEANALT=2;MQM=36;MQMR=46.6598;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.639175;PAO=0;PQA=0;PQR=0;PRO=0;QA=150;QR=3694;RO=97;RPL=0;RPP=11.6962;RPPR=213.643;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=97;SRP=213.643;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:455:0:0:0,-3.61236,-39.6559 0/0:26:26,0:26:967:0:0:0,-7.82678,-83.7075 0/1:26:21,4:21:792:4:150:-4.71084,0,-50.2165 0/0:26:26,0:26:1025:0:0:0,-7.82678,-76.1779 0/0:2:2,0:2:73:0:0:0,-0.60206,-4.79858 0/0:10:10,0:10:382:0:0:0,-3.0103,-19.0773 dDocent_Contig_10809 28 . A C 366.231 . AB=0.0816327;ABP=77.5051;AC=0;AF=0;AN=10;AO=4;CIGAR=2M1X2M;DP=258;DPB=252.2;DPRA=0.84;EPP=11.6962;EPPR=489.42;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=5;NUMALT=2;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.991071;PAO=0;PQA=0;PQR=0;PRO=0;QA=164;QR=8726;RO=224;RPL=0;RPP=11.6962;RPPR=489.42;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=224;SRP=489.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:49:32,12,4:32:1244:12,4:457,164:-27.8204,0,-98.5938,-23.9107,-88.6676,-124.935 0|0:109:101,8,0:101:3936:8,0:301,0:0,-5.37052,-326.855,-30.404,-329.263,-353.92 0|0:34:28,6,0:28:1079:6,0:244,0:-12.1038,0,-87.1737,-20.5326,-88.9799,-109.11 0|0:51:48,3,0:48:1886:3,0:116,0:0,-4.53554,-159.151,-14.4494,-160.054,-169.581 .:.:.:.:.:.:.:. 0|0:15:15,0,0:15:581:0,0:0,0:0,-4.51545,-52.6272,-4.51545,-52.6272,-52.6272 dDocent_Contig_10810 8 . C T 5316.14 . AB=0.498695;ABP=3.01597;AC=5;AF=0.416667;AN=12;AO=193;CIGAR=1X1M1X;DP=462;DPB=462;DPRA=0;EPP=280.34;EPPR=433.761;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.772021;PAIREDR=0.69145;PAO=0;PQA=0;PQR=0;PRO=0;QA=7341;QR=10255;RO=269;RPL=0;RPP=422.104;RPPR=587.136;RPR=193;RUN=1;SAF=175;SAP=280.34;SAR=18;SRF=250;SRP=433.761;SRR=19;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:83:56,27:56:2162:27:1041:-69.0129,0,-169.819 0|0:79:77,2:77:2921:2:66:0,-17.5148,-256.796 0|1:53:45,8:45:1725:8:299:-11.31,0,-139.554 0|1:89:61,28:61:2303:28:1055:-68.4623,0,-180.699 0|1:95:17,78:17:648:78:2983:-240.037,0,-30.0579 0|1:63:13,50:13:496:50:1897:-152.013,0,-26.0216 dDocent_Contig_10811 59 . A G 2179.04 . AB=0.539568;ABP=4.90057;AC=4;AF=0.4;AN=10;AO=76;CIGAR=1X;DP=146;DPB=146;DPRA=0;EPP=168.042;EPPR=155.013;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0.986842;PAIREDR=0.985714;PAO=0;PQA=0;PQR=0;PRO=0;QA=2960;QR=2759;RO=70;RPL=76;RPP=168.042;RPPR=155.013;RPR=0;RUN=1;SAF=76;SAP=168.042;SAR=0;SRF=70;SRP=155.013;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:12,19:12:470:19:754:-58.8491,0,-33.3161 0/1:53:11,42:11:436:42:1651:-132.867,0,-23.6376 0/1:11:5,6:5:202:6:227:-17.4768,0,-15.2507 0/1:44:36,8:36:1408:8:321:-16.0126,0,-113.735 0/0:7:6,1:6:243:1:7:0,-1.40721,-21.5482 ./.:.:.:.:.:.:.:. dDocent_Contig_10812 17 . A T 5920.07 . AB=0.0486891;ABP=475.375;AC=0;AF=0;AN=12;AO=13;CIGAR=1X3M1X2M1X3M1X3M1X3M1X2M1X;DP=546;DPB=546;DPRA=0;EPP=31.2394;EPPR=354.789;GTI=0;LEN=1;MEANALT=8.66667;MQM=60;MQMR=60;NS=6;NUMALT=6;ODDS=0;PAIRED=1;PAIREDR=0.895062;PAO=0;PQA=0;PQR=0;PRO=0;QA=510;QR=6336;RO=162;RPL=0;RPP=31.2394;RPPR=354.789;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=162;SRP=354.789;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:68:33,3,0,0,4,1,26:33:1298:3,0,0,4,1,26:118,0,0,149,39,1036:-75.3836,-75.611,-181.48,-85.3176,-182.383,-192.09,-85.3176,-182.383,-192.09,-192.09,-73.1258,-170.19,-179.896,-179.896,-178.692,-82.1118,-179.177,-188.884,-188.884,-176.691,-188.583,0,-97.0737,-106.781,-106.781,-94.5879,-103.575,-98.9537 0|0:89:25,0,3,7,12,0,35:25:986:0,3,7,12,0,35:0,110,273,480,0,1397:-107.529,-115.055,-196.182,-106.067,-187.193,-186.29,-92.6172,-173.744,-164.755,-171.637,-75.5149,-156.642,-147.654,-134.204,-153.03,-115.055,-196.182,-187.193,-173.744,-156.642,-196.182,0,-81.1288,-72.1404,-58.6906,-41.5875,-81.1288,-70.5927 0|0:85:20,7,1,1,29,0,20:20:786:7,1,1,29,0,20:279,40,40,1134,0,808:-89.1751,-72.219,-134.76,-91.9005,-133.572,-156.248,-91.9005,-133.572,-153.253,-156.248,-1.96917,-43.6388,-63.3201,-63.3201,-57.8854,-95.1957,-136.867,-156.549,-156.549,-66.6152,-159.844,-28.5804,-70.2522,-89.934,-89.934,0,-93.2292,-87.2086 0|0:114:49,3,7,3,7,0,32:49:1904:3,7,3,7,0,32:113,273,119,268,0,1269:-89.7101,-95.2021,-250.75,-82.0197,-229.212,-236.364,-94.664,-241.857,-228.675,-250.212,-82.4721,-229.664,-216.482,-229.127,-236.816,-104.461,-251.653,-238.471,-251.115,-238.923,-260.912,0,-147.198,-134.016,-146.66,-134.468,-156.457,-146.824 0|0:92:23,0,0,10,15,5,27:23:894:0,0,10,15,5,27:0,0,401,588,195,1074:-81.5012,-88.4249,-161.886,-88.4249,-161.886,-161.886,-55.3852,-128.847,-128.847,-125.836,-40.0776,-113.538,-113.538,-80.4984,-109.023,-72.396,-145.857,-145.857,-112.817,-97.5091,-144.352,0,-73.461,-73.461,-40.4206,-25.1127,-57.4318,-65.3332 0|0:98:12,0,0,7,12,12,50:12:468:0,0,7,12,12,50:0,0,280,470,445,1984:-159.882,-163.495,-201.963,-163.495,-201.963,-201.963,-140.429,-178.898,-178.898,-176.791,-124.85,-163.319,-163.319,-140.253,-159.706,-127.088,-165.557,-165.557,-142.491,-126.912,-161.944,-0.176461,-38.6479,-38.6479,-15.58,0,-2.24198,-23.5964 dDocent_Contig_10813 8 . C T 605.3 . AB=0.256198;ABP=65.4805;AC=3;AF=0.25;AN=12;AO=33;CIGAR=3X;DP=245;DPB=245;DPRA=0.908046;EPP=74.6689;EPPR=443.984;GTI=0;LEN=1;MEANALT=1.25;MQM=43.303;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.151515;PAIREDR=0.57346;PAO=0;PQA=0;PQR=0;PRO=0;QA=1269;QR=8108;RO=211;RPL=0;RPP=74.6689;RPPR=461.191;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=209;SRP=443.984;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:48:48,0:48:1840:0:0:0,-14.4494,-165.849 0|0:37:35,2:35:1353:2:79:0,-4.22554,-115.141 0|0:39:39,0:39:1502:0:0:0,-11.7402,-135.453 0|1:29:25,4:25:949:4:149:-2.9036,0,-76.9922 0|1:35:30,5:30:1152:5:193:-6.59665,0,-93.4449 0|1:57:34,22:34:1312:22:848:-56.2427,0,-101.276 dDocent_Contig_10814 93 . C T 1817.15 . AB=0.40404;ABP=18.8467;AC=6;AF=0.5;AN=12;AO=80;CIGAR=1X;DP=198;DPB=198;DPRA=0;EPP=176.728;EPPR=259.244;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.5625;PAIREDR=0.601695;PAO=0;PQA=0;PQR=0;PRO=0;QA=2784;QR=4086;RO=118;RPL=80;RPP=176.728;RPPR=259.244;RPR=0;RUN=1;SAF=80;SAP=176.728;SAR=0;SRF=118;SRP=259.244;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:15:6,9:6:210:9:309:-23.628,0,-14.727 0/1:41:29,12:29:975:12:411:-24.977,0,-75.7124 0/1:30:26,4:26:918:4:139:-3.82172,0,-73.9061 0/1:47:37,10:37:1282:10:347:-17.4155,0,-101.527 0/1:22:7,15:7:249:15:529:-41.3193,0,-16.1329 0/1:43:13,30:13:452:30:1049:-81.7745,0,-28.066 dDocent_Contig_10815 46 . C T 50.1678 . AB=0.107692;ABP=89.9026;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=1X;DP=138;DPB=138;DPRA=1.78082;EPP=18.2106;EPPR=287.473;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=285;QR=5248;RO=131;RPL=0;RPP=18.2106;RPPR=287.473;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=131;SRP=287.473;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:365:0:0:0,-2.70927,-33.2149 0/0:32:32,0:32:1296:0:0:0,-9.63296,-116.902 0/1:28:24,4:24:967:4:162:-6.53812,0,-78.9011 0/1:37:34,3:34:1347:3:123:-0.326678,0,-110.355 0/0:12:12,0:12:473:0:0:0,-3.61236,-42.9156 0/0:20:20,0:20:800:0:0:0,-6.0206,-72.3151 dDocent_Contig_10816 26 . A G 1697.58 . AB=0.176471;ABP=33.9218;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X2M1X3M1X;DP=181;DPB=181;DPRA=0;EPP=16.0391;EPPR=209.3;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=0;PAIREDR=0.989474;PAO=0;PQA=0;PQR=0;PRO=0;QA=227;QR=3645;RO=95;RPL=0;RPP=16.0391;RPPR=209.3;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=95;SRP=209.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:14:2,5,7,0,0,0:2:79:5,7,0,0,0:188,263,0,0,0:-29.8272,-15.0265,-20.0266,-8.8828,0,-13.2819,-30.4293,-21.5317,-15.3892,-36.9329,-30.4293,-21.5317,-15.3892,-36.9329,-36.9329,-30.4293,-21.5317,-15.3892,-36.9329,-36.9329,-36.9329 0|0:20:7,1,10,0,0,0:7:277:1,10,0,0,0:39,369,0,0,0:-28.0528,-26.9529,-49.4578,0,-19.5941,-19.7891,-30.16,-49.7589,-22.7994,-52.9652,-30.16,-49.7589,-22.7994,-52.9652,-52.9652,-30.16,-49.7589,-22.7994,-52.9652,-52.9652,-52.9652 0|0:18:7,0,11,0,0,0:7:273:0,11,0,0,0:0,416,0,0,0:-32.3727,-34.4799,-56.9253,0,-22.8305,-19.5191,-34.4799,-56.9253,-22.8305,-56.9253,-34.4799,-56.9253,-22.8305,-56.9253,-56.9253,-34.4799,-56.9253,-22.8305,-56.9253,-56.9253,-56.9253 0|0:32:6,0,14,3,6,3:6:231:0,14,3,6,3:0,532,120,237,108:-41.9936,-43.7998,-62.7654,-0.172306,-19.1376,-14.9232,-33.9124,-52.8785,-9.2495,-51.9754,-24.6621,-43.6283,0,-33.7408,-41.8221,-34.9916,-53.9566,-10.3314,-44.0698,-34.82,-53.0535 0|0:38:27,0,11,0,0,0:27:1015:0,11,0,0,0:0,395,0,0,0:-24.4454,-32.5732,-115.734,0,-83.525,-80.2136,-32.5732,-115.734,-83.525,-115.734,-32.5732,-115.734,-83.525,-115.734,-115.734,-32.5732,-115.734,-83.525,-115.734,-115.734,-115.734 0|0:59:46,0,13,0,0,0:46:1770:0,13,0,0,0:0,463,0,0,0:-24.2421,-38.0895,-183.427,0,-145.7,-141.786,-38.0895,-183.427,-145.7,-183.427,-38.0895,-183.427,-145.7,-183.427,-183.427,-38.0895,-183.427,-145.7,-183.427,-183.427,-183.427 dDocent_Contig_10817 10 . G A 831.866 . AB=0.25;ABP=85.5263;AC=4;AF=0.333333;AN=12;AO=38;CIGAR=1X;DP=203;DPB=203;DPRA=1.4902;EPP=85.5263;EPPR=361.303;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1497;QR=6530;RO=165;RPL=0;RPP=85.5263;RPPR=361.303;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=165;SRP=361.303;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:18:15,3:15:590:3:122:-5.95395,0,-48.0178 0/1:61:52,9:52:2058:9:350:-13.4959,0,-167.047 0/1:36:25,11:25:997:11:446:-29.6589,0,-79.1921 0/1:37:22,15:22:874:15:579:-41.2997,0,-67.8295 0/0:26:26,0:26:1012:0:0:0,-7.82678,-91.364 0/0:25:25,0:25:999:0:0:0,-7.52575,-90.208 dDocent_Contig_10820 12 . T C 176.811 . AB=0.235294;ABP=23.7032;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=97;DPB=97;DPRA=2.69841;EPP=20.3821;EPPR=196.271;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=323;QR=3509;RO=89;RPL=0;RPP=20.3821;RPPR=196.271;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=89;SRP=196.271;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:469:0:0:0,-3.61236,-42.5554 0/0:25:25,0:25:983:0:0:0,-7.52575,-88.7632 0/0:1:1,0:1:41:0:0:0,-0.30103,-4.09457 0/0:15:15,0:15:607:0:0:0,-4.51545,-54.9657 0/1:34:26,8:26:1012:8:323:-19.2036,0,-81.1365 0/0:10:10,0:10:397:0:0:0,-3.0103,-36.086 dDocent_Contig_10821 52 . T A 133.692 . AB=0.416667;ABP=3.73412;AC=1;AF=0.125;AN=8;AO=5;CIGAR=1X;DP=48;DPB=48;DPRA=1;EPP=13.8677;EPPR=96.3836;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=8.67362e-19;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=200;QR=1687;RO=43;RPL=5;RPP=13.8677;RPPR=96.3836;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=43;SRP=96.3836;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:7,5:7:274:5:200:-14.7672,0,-21.413 0/0:14:14,0:14:549:0:0:0,-4.21442,-49.7465 0/0:11:11,0:11:440:0:0:0,-3.31133,-39.9542 0/0:11:11,0:11:424:0:0:0,-3.31133,-38.5035 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10822 106 . N G 61.7437 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=2X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=65;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:65:-6.17329,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_10823 8 . C T 60.8868 . AB=0.133333;ABP=55.5599;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=226;DPB=226;DPRA=1.23762;EPP=22.5536;EPPR=474.22;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.444444;PAIREDR=0.516129;PAO=0;PQA=0;PQR=0;PRO=0;QA=348;QR=8333;RO=217;RPL=0;RPP=22.5536;RPPR=474.22;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=217;SRP=474.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:42:41,1:41:1559:1:39:0,-8.74669,-136.684 0/0:38:36,2:36:1392:2:78:0,-4.03567,-118.158 0/0:37:37,0:37:1427:0:0:0,-11.1381,-128.708 0/1:45:39,6:39:1481:6:231:-7.61156,0,-120.018 0/0:17:17,0:17:653:0:0:0,-5.11751,-59.1046 0/0:47:47,0:47:1821:0:0:0,-14.1484,-164.138 dDocent_Contig_10824 48 . T C 780.284 . AB=0.453125;ABP=4.23175;AC=4;AF=0.333333;AN=12;AO=31;CIGAR=1X;DP=93;DPB=93;DPRA=2.9;EPP=70.3259;EPPR=135.47;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.903226;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1211;QR=2418;RO=61;RPL=0;RPP=70.3259;RPPR=135.47;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=61;SRP=135.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:8:7,1:7:280:1:41:-1.68633,0,-23.1633 0/1:19:10,9:10:393:9:346:-25.7738,0,-30.0047 0/0:6:6,0:6:242:0:0:0,-1.80618,-22.1569 0/0:23:20,2:20:783:2:70:0,-0.334603,-64.1438 0/1:14:3,11:3:118:11:438:-35.5608,0,-6.78778 0/1:23:15,8:15:602:8:316:-21.8815,0,-47.5932 dDocent_Contig_10825 25 . G A 1384.85 . AB=0.313187;ABP=58.18;AC=5;AF=0.416667;AN=12;AO=58;CIGAR=1X;DP=206;DPB=206;DPRA=0;EPP=128.956;EPPR=315.702;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.982759;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2253;QR=5664;RO=144;RPL=0;RPP=128.956;RPPR=315.702;RPR=58;RUN=1;SAF=58;SAP=128.956;SAR=0;SRF=144;SRP=315.702;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:23,1:23:905:1:25:0,-4.72486,-79.2554 0/1:31:17,14:17:685:14:557:-41.1405,0,-52.6465 0/1:20:17,3:17:685:3:97:-3.02633,0,-55.9585 0/1:23:13,9:13:515:9:354:-25.4833,0,-39.9692 0/1:64:42,20:42:1665:20:781:-51.542,0,-131.02 0/1:44:32,11:32:1209:11:439:-26.5084,0,-95.7242 dDocent_Contig_10826 138 . T C 928.098 . AB=0.325581;ABP=14.3727;AC=4;AF=0.5;AN=8;AO=14;CIGAR=1X3M;DP=92;DPB=92;DPRA=1.53571;EPP=33.4109;EPPR=100.727;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=4;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=468;QR=1539;RO=45;RPL=0;RPP=33.4109;RPPR=100.727;RPR=14;RUN=1;SAF=0;SAP=33.4109;SAR=14;SRF=0;SRP=100.727;SRR=45;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:7:5,0,2:5:169:0,2:0,65:-4.06608,-5.57123,-19.2804,0,-14.0378,-13.4358 1|1:36:7,17,12:7:243:17,12:579,403:-57.7488,-12.8788,-27.5201,-27.2133,0,-43.3574 0|1:35:19,16,0:19:645:16,0:518,0:-36.3919,0,-47.8338,-42.1114,-52.6502,-94.4309 0|0:14:14,0,0:14:482:0,0:0,0:0,-4.21442,-43.708,-4.21442,-43.708,-43.708 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_10827 83 . A C 83.2028 . AB=0.147059;ABP=76.5849;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=175;DPB=175;DPRA=1.27103;EPP=24.725;EPPR=361.303;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.739394;PAO=0;PQA=0;PQR=0;PRO=0;QA=348;QR=5688;RO=165;RPL=5;RPP=3.0103;RPPR=3.02346;RPR=5;RUN=1;SAF=5;SAP=3.0103;SAR=5;SRF=82;SRP=3.02346;SRR=83;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:32,4:32:1096:4:150:-3.02821,0,-88.0998 0/0:40:40,0:40:1379:0:0:0,-12.0412,-124.397 0/0:20:20,0:20:664:0:0:0,-6.0206,-60.0669 0/0:35:35,0:35:1223:0:0:0,-10.536,-110.371 0/0:12:12,0:12:412:0:0:0,-3.61236,-37.4087 0/1:32:26,6:26:914:6:198:-8.50719,0,-72.9417 dDocent_Contig_10828 8 . C G 310.664 . AB=0.202381;ABP=67.6375;AC=2;AF=0.166667;AN=12;AO=18;CIGAR=1X;DP=212;DPB=212;DPRA=1.75325;EPP=42.0968;EPPR=424.276;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.944444;PAIREDR=0.948454;PAO=0;PQA=0;PQR=0;PRO=0;QA=677;QR=7487;RO=194;RPL=0;RPP=42.0968;RPPR=424.276;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=194;SRP=424.276;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:45:33,12:33:1261:12:467:-28.836,0,-100.235 0/1:39:34,5:34:1308:5:187:-5.45225,0,-106.264 0/0:51:50,1:50:1933:1:23:0,-13.0526,-171.91 0/0:23:23,0:23:889:0:0:0,-6.92369,-80.329 0/0:32:32,0:32:1245:0:0:0,-9.63296,-112.342 0/0:22:22,0:22:851:0:0:0,-6.62266,-76.9126 dDocent_Contig_10829 13 . T C 2844.83 . AB=0.300633;ABP=112.106;AC=4;AF=0.333333;AN=12;AO=95;CIGAR=2M1X8M;DP=378;DPB=380.545;DPRA=2.54839;EPP=209.3;EPPR=580.622;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3808;QR=10465;RO=266;RPL=0;RPP=209.3;RPPR=580.622;RPR=95;RUN=1;SAF=95;SAP=209.3;SAR=0;SRF=266;SRP=580.622;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:98:54,0,44:54:2114:0,44:0,1757:-128.843,-145.099,-318.912,0,-174.208,-160.963 0|1:117:94,0,22:94:3700:0,22:0,886:-44.7204,-73.0172,-377.375,0,-304.349,-297.726 0|1:54:44,0,9:44:1745:0,9:0,366:-16.9861,-30.2314,-173.87,0,-143.678,-140.969 0|1:47:26,0,20:26:1022:0,20:0,799:-58.2553,-66.0821,-150.147,0,-84.3328,-78.3122 0|0:47:47,0,0:47:1844:0,0:0,0:0,-14.1484,-166.187,-14.1484,-166.187,-166.187 0|0:15:1,13,0:1:40:13,0:517,0:-42.8989,-0.598439,0,-43.2,-3.91339,-46.4954 dDocent_Contig_10830 182 . T C 441.594 . AB=0.190083;ABP=103.957;AC=3;AF=0.25;AN=12;AO=27;CIGAR=1X;DP=223;DPB=223;DPRA=1.03889;EPP=61.6401;EPPR=428.619;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.814815;PAIREDR=0.790816;PAO=0;PQA=0;PQR=0;PRO=0;QA=1082;QR=7862;RO=196;RPL=27;RPP=61.6401;RPPR=428.619;RPR=0;RUN=1;SAF=0;SAP=61.6401;SAR=27;SRF=0;SRP=428.619;SRR=196;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:30,1:30:1188:1:41:0,-5.23736,-103.101 0/0:35:32,3:32:1287:3:100:0,-1.21288,-106.767 0/1:33:24,9:24:965:9:368:-23.5514,0,-77.2129 0/1:41:32,9:32:1289:9:368:-21.1431,0,-103.929 0/1:47:42,5:42:1703:5:205:-4.6866,0,-139.337 0/0:36:36,0:36:1430:0:0:0,-10.8371,-128.952 dDocent_Contig_10832 13 . G A 608.524 . AB=0.157025;ABP=250.271;AC=2;AF=0.166667;AN=12;AO=49;CIGAR=3M1X;DP=651;DPB=660.5;DPRA=1.01682;EPP=109.412;EPPR=1219.17;GTI=0;LEN=1;MEANALT=2;MQM=59.8571;MQMR=59.9948;NS=6;NUMALT=2;ODDS=5.55112e-17;PAIRED=0;PAIREDR=0.365385;PAO=0;PQA=0;PQR=0;PRO=0;QA=1945;QR=22691;RO=572;RPL=0;RPP=109.412;RPPR=1245.09;RPR=49;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=569;SRP=1219.17;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:77:74,1,2:74:2972:1,2:41,81:0,-18.8902,-263.485,-15.6161,-257.122,-259.904 0|1:108:93,0,14:93:3683:0,14:0,564:-18.501,-46.4968,-349.616,0,-303.13,-298.915 0|0:66:62,0,4:62:2462:0,4:0,158:0,-18.6639,-221.339,-5.26862,-208.338,-207.134 0|1:134:105,0,24:105:4123:0,24:0,939:-45.5733,-77.1814,-416.259,0,-339.065,-331.841 0|0:107:101,6,0:101:3991:6,0:236,0:0,-10.5981,-337.588,-30.404,-339.394,-358.807 0|0:159:137,12,5:137:5460:12,5:479,203:0,-1.78931,-447.791,-24.4964,-434.661,-472.606 dDocent_Contig_10833 98 . N T 379.549 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=13;CIGAR=1X;DP=13;DPB=13;DPRA=0;EPP=31.2394;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=402;QR=0;RO=0;RPL=13;RPP=31.2394;RPPR=0;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:59:-5.60384,-0.60206,0 1/1:5:0,5:0:0:5:161:-14.8076,-1.50515,0 1/1:1:0,1:0:0:1:25:-2.49986,-0.30103,0 1/1:5:0,5:0:0:5:157:-14.4403,-1.50515,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10834 19 . T A 845.305 . AB=0.165049;ABP=304.128;AC=2;AF=0.166667;AN=12;AO=67;CIGAR=1M1I3M2X;DP=1087;DPB=1103.67;DPRA=0.568198;EPP=148.499;EPPR=2200.54;GTI=0;LEN=1;MEANALT=2.2;MQM=59.0597;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.701493;PAIREDR=0.821146;PAO=0;PQA=0;PQR=0;PRO=0;QA=2632;QR=39835;RO=1012;RPL=0;RPP=148.499;RPPR=2200.54;RPR=67;RUN=1;SAF=67;SAP=148.499;SAR=0;SRF=1012;SRP=2200.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:76:69,6:69:2738:6:234:0,-1.54565,-225.121 0|1:149:117,31:117:4611:31:1214:-64.8565,0,-370.294 0|0:90:80,6:80:3182:6:240:0,-4.31042,-264.494 0|1:160:139,20:139:5525:20:788:-22.8958,0,-448.925 0|0:329:324,4:324:12654:4:156:0,-84.719,-1123.72 0|0:283:283,0:283:11125:0:0:0,-85.1915,-1000.64 dDocent_Contig_10835 51 . A T 494.529 . AB=0.206897;ABP=111.21;AC=4;AF=0.333333;AN=12;AO=30;CIGAR=1X;DP=160;DPB=160;DPRA=4.83333;EPP=68.1545;EPPR=283.13;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.968992;PAO=0;PQA=0;PQR=0;PRO=0;QA=1100;QR=5017;RO=129;RPL=30;RPP=68.1545;RPPR=283.13;RPR=0;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=129;SRP=283.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:10:6,4:6:227:4:150:-10.8537,0,-17.7804 0/1:36:32,4:32:1251:4:156:-3.57953,0,-102.031 0/1:56:46,9:46:1793:9:312:-11.4634,0,-144.641 0/1:43:30,13:30:1156:13:482:-30.7762,0,-91.381 0/0:12:12,0:12:469:0:0:0,-3.61236,-42.5579 0/0:3:3,0:3:121:0:0:0,-0.90309,-11.28 dDocent_Contig_10836 11 . A T 165.66 . AB=0.5;ABP=3.0103;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=160;DPB=160;DPRA=0.73913;EPP=20.3821;EPPR=328.731;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.875;PAIREDR=0.606667;PAO=0;PQA=0;PQR=0;PRO=0;QA=305;QR=6001;RO=150;RPL=0;RPP=20.3821;RPPR=328.731;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=150;SRP=328.731;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:38,1:38:1482:1:27:0,-9.3801,-130.859 0/0:31:31,0:31:1249:0:0:0,-9.33193,-112.677 0/0:24:24,0:24:975:0:0:0,-7.22472,-88.0463 0/0:37:36,0:36:1452:0:0:0,-10.8371,-130.519 0/0:16:15,1:15:599:1:41:0,-0.721913,-50.1549 0/1:12:6,6:6:244:6:237:-18.0888,0,-18.7265 dDocent_Contig_10837 9 . T C 926.336 . AB=0.203488;ABP=134.359;AC=2;AF=0.166667;AN=12;AO=35;CIGAR=5M1X2M;DP=384;DPB=380.5;DPRA=0.811321;EPP=79.0118;EPPR=730.454;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1344;QR=12795;RO=335;RPL=0;RPP=79.0118;RPPR=730.454;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=335;SRP=730.454;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:39:39,0,0:39:1497:0,0:0,0:0,-11.7402,-135.007,-11.7402,-135.007,-135.007 0|1:85:61,0,24:61:2336:0,24:0,927:-58.1579,-76.5207,-268.231,0,-192.095,-184.87 0|1:52:47,0,5:47:1790:0,5:0,187:-1.53781,-15.6862,-162.52,0,-147.208,-145.703 0|0:96:96,0,0:96:3667:0,0:0,0:0,-28.8989,-330.156,-28.8989,-330.156,-330.156 0|0:35:15,14,6:15:559:14,6:516,230:-37.6732,0,-41.5392,-23.3072,-26.8735,-67.2643 0|0:77:77,0,0:77:2946:0,0:0,0:0,-23.1793,-265.316,-23.1793,-265.316,-265.316 dDocent_Contig_10838 17 . C T 284.454 . AB=0.233333;ABP=40.0701;AC=3;AF=0.25;AN=12;AO=15;CIGAR=1X;DP=189;DPB=189;DPRA=0.611765;EPP=35.5824;EPPR=372.211;GTI=0;LEN=1;MEANALT=1;MQM=59.8;MQMR=59.5172;NS=6;NUMALT=1;ODDS=0;PAIRED=0.933333;PAIREDR=0.965517;PAO=0;PQA=0;PQR=0;PRO=0;QA=601;QR=7058;RO=174;RPL=0;RPP=35.5824;RPPR=380.846;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=173;SRP=372.211;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1328:0:0:0,-9.93399,-119.778 0/1:22:19,3:19:771:3:122:-4.74619,0,-63.0846 0/0:52:52,0:52:2117:0:0:0,-15.6536,-190.49 0/0:44:43,1:43:1741:1:39:0,-9.34875,-152.799 0/1:10:8,2:8:325:2:82:-4.76938,0,-26.6091 0/1:28:19,9:19:776:9:358:-24.1514,0,-61.5224 dDocent_Contig_10839 10 . C A 44.3109 . AB=0.166667;ABP=20.3821;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=106;DPB=106;DPRA=1.02273;EPP=9.52472;EPPR=226.672;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.582524;PAO=0;PQA=0;PQR=0;PRO=0;QA=122;QR=4115;RO=103;RPL=0;RPP=9.52472;RPPR=226.672;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=103;SRP=226.672;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:559:0:0:0,-4.21442,-50.6504 0/1:18:15,3:15:589:3:122:-5.95395,0,-47.9265 0/0:13:13,0:13:493:0:0:0,-3.91339,-44.6975 0/0:28:28,0:28:1139:0:0:0,-8.42884,-102.787 0/0:21:21,0:21:851:0:0:0,-6.32163,-76.9015 0/0:12:12,0:12:484:0:0:0,-3.61236,-43.9108 dDocent_Contig_10841 114 . A T 440.047 . AB=0.269231;ABP=27.0635;AC=6;AF=0.5;AN=12;AO=33;CIGAR=1X;DP=138;DPB=138;DPRA=0.292857;EPP=74.6689;EPPR=231.015;GTI=0;LEN=1;MEANALT=1;MQM=27.9394;MQMR=59.419;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.969697;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1098;QR=3590;RO=105;RPL=0;RPP=74.6689;RPPR=231.015;RPR=33;RUN=1;SAF=0;SAP=74.6689;SAR=33;SRF=0;SRP=231.015;SRR=105;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:7:0,7:0:0:7:222:-19.9776,-2.10721,0 0/1:16:7,9:7:244:9:307:-0.917748,0,-16.9861 1/1:10:0,10:0:0:10:326:-20.2724,-3.0103,0 0/0:13:11,2:11:381:2:70:0,-2.58444,-33.2947 0/0:56:56,0:56:1922:0:0:0,-16.8577,-172.769 0/1:36:31,5:31:1043:5:173:-4.97048,0,-83.3375 dDocent_Contig_10842 92 . C T 94.3467 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=1X;DP=371;DPB=371;DPRA=0.758294;EPP=18.2106;EPPR=793.426;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.857143;PAIREDR=0.870879;PAO=0;PQA=0;PQR=0;PRO=0;QA=236;QR=12503;RO=364;RPL=7;RPP=18.2106;RPPR=793.426;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=364;SRP=793.426;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:78:76,2:76:2596:2:70:0,-16.8329,-227.25 0/0:137:137,0:137:4710:0:0:0,-41.2411,-424.088 0/0:72:72,0:72:2473:0:0:0,-21.6742,-222.831 0/0:79:77,2:77:2654:2:70:0,-17.134,-232.47 1/1:3:0,3:0:0:3:96:-8.95728,-0.90309,0 0/0:2:2,0:2:70:0:0:0,-0.60206,-6.6474 dDocent_Contig_10843 11 . T C 671.175 . AB=0.290323;ABP=38.5244;AC=2;AF=0.166667;AN=12;AO=27;CIGAR=1X;DP=295;DPB=295;DPRA=0.920792;EPP=61.6401;EPPR=584.965;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9925;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1085;QR=10621;RO=268;RPL=0;RPP=61.6401;RPPR=584.965;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=268;SRP=584.965;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:271:0:0:0,-2.10721,-24.7536 0/1:24:8,16:8:320:16:646:-51.2492,0,-21.943 0/0:28:28,0:28:1107:0:0:0,-8.42884,-99.9151 0/1:69:58,11:58:2259:11:439:-19.0902,0,-182.707 0/0:85:85,0:85:3412:0:0:0,-25.5875,-307.119 0/0:82:82,0:82:3252:0:0:0,-24.6845,-292.749 dDocent_Contig_10845 29 . C A 62.3051 . AB=0.0862069;ABP=89.2702;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X2M1X;DP=265;DPB=265;DPRA=1.26776;EPP=13.8677;EPPR=545.878;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=203;QR=9846;RO=250;RPL=0;RPP=13.8677;RPPR=545.878;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=250;SRP=545.878;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:20:20,0,0:20:789:0,0:0,0:0,-6.0206,-71.328,-6.0206,-71.328,-71.328 0|0:54:54,0,0:54:2116:0,0:0,0:0,-16.2556,-190.635,-16.2556,-190.635,-190.635 0|0:24:20,0,4:20:799:0,4:0,162:-7.74224,-13.7628,-79.5663,0,-66.2071,-65.0029 0|0:48:46,0,2:46:1797:0,2:0,80:0,-13.8474,-161.556,-6.85765,-154.966,-154.364 0|0:61:57,0,4:57:2273:0,4:0,157:0,-17.1587,-204.343,-3.85515,-191.432,-190.227 0|1:58:53,5,0:53:2072:5,0:203,0:-1.19332,0,-169.217,-17.1479,-170.722,-187.466 dDocent_Contig_10847 29 . A T 4928.43 . AB=0.544554;ABP=4.75178;AC=8;AF=0.666667;AN=12;AO=152;CIGAR=1X;DP=203;DPB=203;DPRA=0;EPP=333.074;EPPR=113.755;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6077;QR=2023;RO=51;RPL=0;RPP=333.074;RPPR=113.755;RPR=152;RUN=1;SAF=152;SAP=333.074;SAR=0;SRF=51;SRP=113.755;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:9,16:9:364:16:650:-51.3078,0,-25.5986 1/1:42:1,41:1:41:41:1608:-140.86,-8.54869,0 1/1:60:4,56:4:153:56:2251:-188.61,-3.9206,0 0/1:35:7,28:7:278:28:1122:-90.7293,0,-14.8525 0/1:21:17,4:17:663:4:161:-8.55364,0,-53.6722 0/1:20:13,7:13:524:7:285:-20.0038,0,-41.4858 dDocent_Contig_10849 65 . C A 1070.94 . AB=0.159737;ABP=462.588;AC=4;AF=0.333333;AN=12;AO=79;CIGAR=1X;DP=608;DPB=608;DPRA=0;EPP=174.557;EPPR=1151.72;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.962025;PAIREDR=0.956522;PAO=0;PQA=0;PQR=0;PRO=0;QA=2994;QR=19821;RO=529;RPL=79;RPP=174.557;RPPR=1151.72;RPR=0;RUN=1;SAF=79;SAP=174.557;SAR=0;SRF=529;SRP=1151.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:75:65,10:65:2418:10:379:-11.8857,0,-195.263 0/1:147:112,35:112:4158:35:1323:-75.1073,0,-330.078 0/1:57:45,12:45:1714:12:468:-25.3138,0,-137.36 0/1:178:162,16:162:6030:16:604:-1.11326,0,-489.08 0/0:78:76,2:76:2881:2:70:0,-16.833,-252.816 0/0:73:69,4:69:2620:4:150:0,-8.1095,-222.133 dDocent_Contig_10850 13 . C G 214.129 . AB=0.229167;ABP=33.5919;AC=3;AF=0.25;AN=12;AO=14;CIGAR=1X;DP=144;DPB=144;DPRA=1.03191;EPP=33.4109;EPPR=285.302;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0;PAIREDR=0.646154;PAO=0;PQA=0;PQR=0;PRO=0;QA=562;QR=5221;RO=130;RPL=0;RPP=33.4109;RPPR=285.302;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=130;SRP=285.302;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:812:0:0:0,-6.0206,-73.3955 0/0:27:27,0:27:1094:0:0:0,-8.12781,-98.7438 0/0:49:46,3:46:1843:3:122:0,-3.37798,-154.698 0/1:22:16,6:16:630:6:239:-15.2618,0,-50.4068 0/1:7:6,1:6:238:1:38:-1.69006,0,-19.6851 0/1:19:15,4:15:604:4:163:-9.33886,0,-48.9797 dDocent_Contig_10851 17 . G A 635.441 . AB=0.410714;ABP=6.88793;AC=1;AF=0.0833333;AN=12;AO=34;CIGAR=1X;DP=298;DPB=298;DPRA=1.36842;EPP=76.8404;EPPR=574.108;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996198;PAO=0;PQA=0;PQR=0;PRO=0;QA=1339;QR=10210;RO=263;RPL=0;RPP=76.8404;RPPR=574.108;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=263;SRP=574.108;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:36,2:36:1405:2:82:0,-3.65946,-118.934 0/0:38:38,0:38:1474:0:0:0,-11.4391,-132.911 0/1:56:32,23:32:1250:23:908:-65.067,0,-95.8109 0/0:56:52,4:52:2016:4:159:0,-2.16535,-166.947 0/0:55:51,4:51:1956:4:149:0,-2.784,-162.476 0/0:55:54,1:54:2109:1:41:0,-12.4621,-185.907 dDocent_Contig_10852 98 . N G 261.897 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=10;CIGAR=1X;DP=10;DPB=10;DPRA=0;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=268;QR=0;RO=0;RPL=10;RPP=24.725;RPPR=0;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:61:-5.69201,-0.90309,0 1/1:3:0,3:0:0:3:95:-8.86438,-0.90309,0 1/1:2:0,2:0:0:2:53:-5.03414,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:24:-2.39989,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_10853 11 . C G 86.9042 . AB=0.153846;ABP=16.5402;AC=2;AF=0.25;AN=8;AO=2;CIGAR=1X1M;DP=37;DPB=37;DPRA=1.625;EPP=7.35324;EPPR=72.4974;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=79;QR=1285;RO=32;RPL=0;RPP=7.35324;RPPR=72.4974;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=32;SRP=72.4974;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:8:5,3,0:5:204:3,0:117,0:-8.50167,0,-16.3358,-10.0068,-17.2389,-26.8494 0|1:13:11,0,2:11:445:0,2:0,79:-3.58385,-6.89518,-43.5937,0,-37.0945,-36.4925 0|0:8:8,0,0:8:319:0,0:0,0:0,-2.40824,-29.0772,-2.40824,-29.0772,-29.0772 0|0:8:8,0,0:8:317:0,0:0,0:0,-2.40824,-28.8929,-2.40824,-28.8929,-28.8929 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_10854 96 . G A 173.193 . AB=0;ABP=0;AC=4;AF=0.333333;AN=12;AO=7;CIGAR=1X;DP=146;DPB=146;DPRA=3.34211;EPP=18.2106;EPPR=304.845;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.978417;PAO=0;PQA=0;PQR=0;PRO=0;QA=204;QR=5003;RO=139;RPL=7;RPP=18.2106;RPPR=304.845;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=139;SRP=304.845;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:103:-9.60952,-0.90309,0 0/0:14:14,0:14:514:0:0:0,-4.21442,-46.601 1/1:2:0,2:0:0:2:73:-6.9313,-0.60206,0 0/0:5:5,0:5:185:0:0:0,-1.50515,-17.01 0/0:94:93,1:93:3345:1:13:0,-26.9968,-299.953 0/0:28:27,1:27:959:1:15:0,-6.92885,-85.1212 dDocent_Contig_10855 7 . T C 63.7722 . AB=0.3;ABP=6.48466;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=76;DPB=76;DPRA=0.757576;EPP=9.52472;EPPR=152.961;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.630137;PAO=0;PQA=0;PQR=0;PRO=0;QA=117;QR=2769;RO=73;RPL=0;RPP=9.52472;RPPR=161.528;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=72;SRP=152.961;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:6:6,0:6:232:0:0:0,-1.80618,-21.2491 0/0:8:8,0:8:310:0:0:0,-2.40824,-28.2637 0/1:10:7,3:7:268:3:117:-7.90008,0,-21.4737 0/0:13:13,0:13:487:0:0:0,-3.91339,-44.1729 0/0:30:30,0:30:1140:0:0:0,-9.0309,-102.898 0/0:9:9,0:9:332:0:0:0,-2.70927,-30.2273 dDocent_Contig_10856 17 . A T 468.977 . AB=0.160221;ABP=184.514;AC=4;AF=0.333333;AN=12;AO=30;CIGAR=1X;DP=276;DPB=276;DPRA=0.926531;EPP=68.1545;EPPR=537.193;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=0.841463;PAO=0;PQA=0;PQR=0;PRO=0;QA=1223;QR=9748;RO=246;RPL=0;RPP=68.1545;RPPR=537.193;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=246;SRP=537.193;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:35,7:35:1400:7:286:-13.4716,0,-113.606 0/1:35:26,9:26:1021:9:366:-22.7689,0,-81.6503 0/0:49:49,0:49:1896:0:0:0,-14.7505,-170.831 0/0:46:45,1:45:1796:1:40:0,-9.8517,-157.845 0/1:46:38,8:38:1522:8:326:-15.8623,0,-123.37 0/1:58:53,5:53:2113:5:205:-1.37527,0,-172.888 dDocent_Contig_10857 11 . A G 707.443 . AB=0.22069;ABP=101.266;AC=1;AF=0.0833333;AN=12;AO=32;CIGAR=1X;DP=1333;DPB=1333;DPRA=0.610269;EPP=72.4974;EPPR=2828.1;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997694;PAO=0;PQA=0;PQR=0;PRO=0;QA=1285;QR=52279;RO=1301;RPL=0;RPP=72.4974;RPPR=2828.1;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=1301;SRP=2828.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:102:102,0:102:4092:0:0:0,-30.7051,-368.247 0/0:76:76,0:76:3030:0:0:0,-22.8783,-272.774 0/0:109:109,0:109:4414:0:0:0,-32.8123,-397.177 0/1:145:113,32:113:4521:32:1285:-72.2672,0,-363.152 0/0:437:437,0:437:17575:0:0:0,-131.55,-1580.27 0/0:464:464,0:464:18647:0:0:0,-139.678,-1676.62 dDocent_Contig_10858 114 . A C 666.905 . AB=0.370787;ABP=15.9171;AC=4;AF=0.5;AN=8;AO=33;CIGAR=1X;DP=89;DPB=89;DPRA=0;EPP=74.6689;EPPR=124.613;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1107;QR=1899;RO=56;RPL=0;RPP=74.6689;RPPR=124.613;RPR=33;RUN=1;SAF=0;SAP=74.6689;SAR=33;SRF=0;SRP=124.613;SRR=56;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:9,3:9:309:3:76:-3.47868,0,-24.5311 0/1:29:23,6:23:782:6:201:-9.68891,0,-61.9666 0/1:24:6,18:6:199:18:620:-48.8995,0,-11.011 0/1:24:18,6:18:609:6:210:-12.0177,0,-47.905 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10859 98 . N G 62.6944 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=2X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=66;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:66:-6.26836,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_10861 26 . A G 959.902 . AB=0.345133;ABP=26.5506;AC=5;AF=0.416667;AN=12;AO=39;CIGAR=1X;DP=129;DPB=129;DPRA=1.4125;EPP=87.6977;EPPR=198.443;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.977778;PAO=0;PQA=0;PQR=0;PRO=0;QA=1510;QR=3534;RO=90;RPL=0;RPP=87.6977;RPPR=198.443;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=90;SRP=198.443;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:11,1:11:435:1:41:-0.482207,0,-35.8896 0/1:33:25,8:25:960:8:308:-18.1397,0,-76.7588 0/1:7:3,4:3:120:4:162:-12.8597,0,-9.08048 0/1:31:12,19:12:467:19:734:-57.0372,0,-33.0437 0/0:16:16,0:16:633:0:0:0,-4.81648,-57.3017 0/1:30:23,7:23:919:7:265:-15.1733,0,-73.9853 dDocent_Contig_10862 12 . C A 97.9916 . AB=0.4;ABP=3.87889;AC=1;AF=0.125;AN=8;AO=4;CIGAR=1X;DP=50;DPB=50;DPRA=0.75;EPP=11.6962;EPPR=102.898;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=8.67362e-19;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=157;QR=1840;RO=46;RPL=0;RPP=11.6962;RPPR=102.898;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=46;SRP=102.898;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 0/0:16:16,0:16:641:0:0:0,-4.81648,-58.0245 ./.:.:.:.:.:.:.:. 0/1:10:6,4:6:243:4:157:-11.4981,0,-19.2377 0/0:14:14,0:14:566:0:0:0,-4.21442,-51.2826 0/0:10:10,0:10:390:0:0:0,-3.0103,-35.4541 dDocent_Contig_10863 15 . G A 280.795 . AB=0.140449;ABP=202.883;AC=3;AF=0.25;AN=12;AO=28;CIGAR=1X;DP=287;DPB=287;DPRA=2.48958;EPP=63.8115;EPPR=565.422;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996139;PAO=0;PQA=0;PQR=0;PRO=0;QA=1068;QR=10242;RO=259;RPL=0;RPP=63.8115;RPPR=565.422;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=259;SRP=565.422;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:18,5:18:726:5:168:-8.51728,0,-58.742 0/0:21:21,0:21:826:0:0:0,-6.32163,-74.6557 0/1:34:25,9:25:951:9:343:-20.9842,0,-75.6513 0/0:27:27,0:27:1088:0:0:0,-8.12781,-98.2066 0/0:61:58,3:58:2303:3:114:0,-7.73154,-196.806 0/1:121:110,11:110:4348:11:443:-3.79873,0,-354.859 dDocent_Contig_10864 9 . G T 91.815 . AB=0.1875;ABP=30.1537;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=238;DPB=238;DPRA=0.776699;EPP=16.0391;EPPR=447.825;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.512931;PAO=0;PQA=0;PQR=0;PRO=0;QA=222;QR=8804;RO=232;RPL=0;RPP=16.0391;RPPR=506.792;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=225;SRP=447.825;SRR=7;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:447:0:0:0,-3.61236,-40.5745 0/1:32:26,6:26:984:6:222:-10.7044,0,-79.2362 0/0:19:19,0:19:726:0:0:0,-5.71957,-65.6698 0/0:45:45,0:45:1686:0:0:0,-13.5463,-151.997 0/0:56:56,0:56:2121:0:0:0,-16.8577,-191.122 0/0:74:74,0:74:2840:0:0:0,-22.2762,-255.775 dDocent_Contig_10865 35 . A G 144.331 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=4;CIGAR=1X;DP=111;DPB=111;DPRA=0.186916;EPP=3.0103;EPPR=3.03059;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.635514;PAO=0;PQA=0;PQR=0;PRO=0;QA=151;QR=3982;RO=107;RPL=0;RPP=11.6962;RPPR=235.358;RPR=4;RUN=1;SAF=2;SAP=3.0103;SAR=2;SRF=53;SRP=3.03059;SRR=54;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:779:0:0:0,-6.32163,-70.4288 0/0:33:33,0:33:1236:0:0:0,-9.93399,-111.525 0/0:16:16,0:16:579:0:0:0,-4.81648,-52.4391 0/0:28:28,0:28:1053:0:0:0,-8.42884,-95.0646 0/0:9:9,0:9:335:0:0:0,-2.70927,-30.4987 1/1:4:0,4:0:0:4:151:-13.9559,-1.20412,0 dDocent_Contig_10866 21 . T A 7109.11 . AB=0.601604;ABP=36.5462;AC=7;AF=0.583333;AN=12;AO=225;CIGAR=1X5M;DP=374;DPB=374;DPRA=0;EPP=491.592;EPPR=189.757;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8905;QR=3295;RO=86;RPL=0;RPP=491.592;RPPR=189.757;RPR=225;RUN=1;SAF=225;SAP=491.592;SAR=0;SRF=86;SRP=189.757;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:81:30,15,0,31:30:1153:15,0,31:569,0,1217:-91.063,-53.4462,-143.579,-100.094,-148.094,-194.743,0,-48.0059,-94.6557,-85.3238 0|1:103:18,12,7,66:18:689:12,7,66:452,261,2619:-210.177,-178.563,-231.486,-194.291,-213.793,-248.718,0,-19.5071,-35.2357,-36.6728 0|1:32:4,2,0,26:4:150:2,0,26:76,0,1027:-83.3138,-78.2865,-89.9674,-84.5179,-90.5694,-96.8012,0,-6.04809,-12.2822,-4.45547 0|1:70:11,8,0,49:11:418:8,0,49:303,0,1958:-157.969,-136.445,-168.311,-161.28,-170.719,-195.555,0,-9.43944,-34.2751,-19.5247 1|1:35:5,0,10,20:5:195:0,10,20:0,380,786:-78.2709,-79.7761,-95.8044,-48.6209,-64.6485,-61.6382,-15.1214,-31.1529,0,-25.1323 0|1:53:18,0,0,33:18:690:0,0,33:0,0,1298:-101.339,-106.758,-163.382,-106.758,-163.382,-163.382,0,-56.6174,-56.6174,-46.6834 dDocent_Contig_10867 14 . G A 13946.2 . AB=0.2021;ABP=2939.86;AC=6;AF=0.5;AN=12;AO=770;CIGAR=1X;DP=3810;DPB=3810;DPRA=0;EPP=1675.04;EPPR=6493.55;GTI=0;LEN=1;MEANALT=2.16667;MQM=47.974;MQMR=58.7321;NS=6;NUMALT=1;ODDS=0;PAIRED=0.955844;PAIREDR=0.648649;PAO=0;PQA=0;PQR=0;PRO=0;QA=30441;QR=118387;RO=2997;RPL=0;RPP=1675.04;RPPR=6510.91;RPR=770;RUN=1;SAF=770;SAP=1675.04;SAR=0;SRF=2995;SRP=6493.55;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:524:422,96:422:16687:96:3833:-160.377,0,-1331.51 0/1:773:563,195:563:22194:195:7758:-412.156,0,-1753.74 0/1:364:307,55:307:12084:55:2188:-81.4035,0,-966.099 0/1:692:573,113:573:22612:113:4454:-160.976,0,-1789.29 0/1:766:586,170:586:23177:170:6677:-329.129,0,-1851.53 0/1:691:546,141:546:21633:141:5531:-261.802,0,-1721.34 dDocent_Contig_10868 19 . C T 355.811 . AB=0.204301;ABP=73.6415;AC=3;AF=0.25;AN=12;AO=19;CIGAR=1X;DP=173;DPB=173;DPRA=1.1625;EPP=44.2683;EPPR=263.813;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=57.9545;NS=6;NUMALT=1;ODDS=0;PAIRED=0.947368;PAIREDR=0.785714;PAO=0;PQA=0;PQR=0;PRO=0;QA=752;QR=6121;RO=154;RPL=0;RPP=44.2683;RPPR=337.417;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=145;SRP=263.813;SRR=9;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:26,4:26:1040:4:159:-5.66122,0,-83.8204 0/0:55:55,0:55:2194:0:0:0,-16.5566,-188.659 0/1:35:31,4:31:1236:4:162:-4.43091,0,-100.972 0/1:28:17,11:17:649:11:431:-30.7106,0,-50.2579 0/0:9:9,0:9:352:0:0:0,-2.70927,-32.0364 0/0:16:16,0:16:650:0:0:0,-4.81648,-57.1183 dDocent_Contig_10869 19 . G A 163.679 . AB=0.291667;ABP=12.0581;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=274;DPB=274;DPRA=0.537037;EPP=22.5536;EPPR=578.45;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.501887;PAO=0;PQA=0;PQR=0;PRO=0;QA=354;QR=10287;RO=265;RPL=0;RPP=22.5536;RPPR=578.45;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=265;SRP=578.45;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:32,2:32:1196:2:79:0,-2.73778,-100.407 0/0:71:71,0:71:2768:0:0:0,-21.3731,-249.246 0/1:24:17,7:17:679:7:275:-17.8907,0,-54.2141 0/0:57:57,0:57:2223:0:0:0,-17.1587,-200.244 0/0:39:39,0:39:1528:0:0:0,-11.7402,-137.76 0/0:49:49,0:49:1893:0:0:0,-14.7505,-170.576 dDocent_Contig_10870 118 . A G 1156.99 . AB=0.097561;ABP=60.6867;AC=5;AF=0.416667;AN=12;AO=45;CIGAR=1X;DP=172;DPB=172;DPRA=0.531915;EPP=100.727;EPPR=276.616;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1515;QR=3555;RO=126;RPL=0;RPP=100.727;RPPR=276.616;RPR=45;RUN=1;SAF=0;SAP=100.727;SAR=45;SRF=0;SRP=276.616;SRR=126;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:37,4:37:1052:4:139:-0.510392,0,-82.6049 0/0:14:13,1:13:366:1:36:0,-0.616145,-29.6161 0/0:32:30,2:30:806:2:70:0,-2.98563,-66.1473 0/0:47:46,0:46:1331:0:0:0,-13.8474,-119.981 1/1:29:0,29:0:0:29:975:-88.051,-8.72987,0 1/1:9:0,9:0:0:9:295:-26.8677,-2.70927,0 dDocent_Contig_10871 11 . G A 336.957 . AB=0.3;ABP=20.3821;AC=3;AF=0.25;AN=12;AO=19;CIGAR=1X;DP=118;DPB=118;DPRA=2.42222;EPP=44.2683;EPPR=217.986;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.949495;PAO=0;PQA=0;PQR=0;PRO=0;QA=747;QR=3959;RO=99;RPL=0;RPP=44.2683;RPPR=217.986;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=99;SRP=217.986;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:7:5,2:5:204:2:82:-5.67247,0,-16.6368 0/0:9:9,0:9:361:0:0:0,-2.70927,-32.853 0/0:18:17,1:17:672:1:41:0,-1.32397,-56.7134 0/1:16:13,3:13:514:3:122:-6.55601,0,-41.7866 0/1:27:17,10:17:671:10:383:-26.6889,0,-52.5845 0/0:41:38,3:38:1537:3:119:0,-1.24773,-127.47 dDocent_Contig_10872 9 . G A 231.266 . AB=0.113565;ABP=414.186;AC=4;AF=0.333333;AN=12;AO=40;CIGAR=1X;DP=427;DPB=427;DPRA=0;EPP=89.8692;EPPR=843.37;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.925;PAIREDR=0.98708;PAO=0;PQA=0;PQR=0;PRO=0;QA=1528;QR=14678;RO=387;RPL=0;RPP=89.8692;RPPR=843.37;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=387;SRP=843.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:77:67,10:67:2558:10:389:-12.1891,0,-207.239 0/1:87:79,8:79:3012:8:311:-2.1647,0,-245.049 0/0:42:40,2:40:1504:2:78:0,-5.23979,-128.222 0/1:92:80,12:80:3005:12:447:-12.874,0,-242.925 0/0:68:66,2:66:2515:2:69:0,-13.9178,-219.996 0/1:61:55,6:55:2084:6:234:-3.06827,0,-169.43 dDocent_Contig_10873 72 . C T 1285.61 . AB=0.315789;ABP=36.611;AC=7;AF=0.583333;AN=12;AO=56;CIGAR=1X;DP=136;DPB=136;DPRA=0;EPP=124.613;EPPR=174.557;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.892857;PAIREDR=0.708861;PAO=0;PQA=0;PQR=0;PRO=0;QA=1944;QR=2687;RO=79;RPL=0;RPP=124.613;RPPR=174.557;RPR=56;RUN=1;SAF=0;SAP=124.613;SAR=56;SRF=0;SRP=174.557;SRR=79;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:14:11,3:11:357:3:104:-5.48867,0,-28.2287 1/1:22:2,20:2:68:20:696:-56.5063,-0.164784,0 0/1:22:11,11:11:371:11:379:-27.8194,0,-27.0929 0/1:19:11,7:11:369:7:244:-16.5318,0,-27.7673 0/1:28:16,12:16:556:12:417:-29.4343,0,-41.9397 0/1:31:28,3:28:966:3:104:-0.371162,0,-77.9216 dDocent_Contig_10874 32 . G A 290.281 . AB=0.191011;ABP=76.816;AC=4;AF=0.4;AN=10;AO=17;CIGAR=1X;DP=99;DPB=99;DPRA=2.225;EPP=39.9253;EPPR=111.478;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=58.4878;NS=5;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.878049;PAO=0;PQA=0;PQR=0;PRO=0;QA=677;QR=3164;RO=82;RPL=0;RPP=39.9253;RPPR=181.071;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=73;SRP=111.478;SRR=9;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:392:0:0:0,-3.0103,-35.6353 0/1:40:35,5:35:1345:5:204:-6.70283,0,-109.275 0/1:19:17,2:17:692:2:82:-2.06011,0,-56.8887 0/1:23:14,9:14:551:9:356:-25.4786,0,-43.0049 ./.:.:.:.:.:.:.:. 0/1:7:6,1:6:184:1:35:-1.39142,0,-12.3032 dDocent_Contig_10875 8 . C T 1063.03 . AB=0.253807;ABP=106.723;AC=3;AF=0.25;AN=12;AO=54;CIGAR=1X;DP=653;DPB=653;DPRA=0.599327;EPP=120.27;EPPR=1303.72;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2039;QR=22785;RO=599;RPL=0;RPP=120.27;RPPR=1303.72;RPR=54;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=599;SRP=1303.72;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:147:147,0:147:5568:0:0:0,-44.2514,-501.1 0/0:159:155,4:155:5872:4:152:0,-33.8141,-514.396 0/0:150:150,0:150:5755:0:0:0,-45.1545,-517.912 0/1:113:100,13:100:3790:13:484:-9.88439,0,-307.188 0/1:49:33,16:33:1263:16:606:-40.1239,0,-99.2103 0/1:35:14,21:14:537:21:797:-61.5169,0,-38.1366 dDocent_Contig_10876 11 . A C 1222.11 . AB=0.197492;ABP=256.569;AC=5;AF=0.416667;AN=12;AO=63;CIGAR=1X;DP=347;DPB=347;DPRA=2.27857;EPP=139.813;EPPR=619.708;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.952381;PAIREDR=0.971831;PAO=0;PQA=0;PQR=0;PRO=0;QA=2508;QR=11398;RO=284;RPL=0;RPP=139.813;RPPR=619.708;RPR=63;RUN=1;SAF=63;SAP=139.813;SAR=0;SRF=284;SRP=619.708;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:58:42,16:42:1698:16:638:-40.2946,0,-135.58 0/1:85:70,15:70:2785:15:595:-28.2997,0,-225.172 0/1:41:27,14:27:1093:14:559:-38.307,0,-86.3116 0/1:72:60,12:60:2406:12:475:-21.4254,0,-195.013 0/0:28:28,0:28:1120:0:0:0,-8.42884,-101.083 0/1:63:57,6:57:2296:6:241:-3.1003,0,-187.828 dDocent_Contig_10877 8 . C T 95.6729 . AB=0.116071;ABP=146.405;AC=1;AF=0.0833333;AN=12;AO=38;CIGAR=1X;DP=650;DPB=650;DPRA=0;EPP=85.5263;EPPR=1306.02;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.447368;PAIREDR=0.496732;PAO=0;PQA=0;PQR=0;PRO=0;QA=1434;QR=23511;RO=612;RPL=0;RPP=85.5263;RPPR=1331.95;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=609;SRP=1306.02;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:60:59,1:59:2258:1:39:0,-14.1652,-199.543 0/1:112:99,13:99:3791:13:494:-11.0902,0,-307.583 0/0:97:90,7:90:3465:7:269:0,-4.62572,-287.404 0/0:129:122,7:122:4691:7:257:0,-15.3513,-398.75 0/0:124:119,5:119:4575:5:182:0,-20.5959,-395.063 0/0:128:123,5:123:4731:5:193:0,-20.7905,-408.081 dDocent_Contig_10878 7 . T C 1106.72 . AB=0.264249;ABP=96.1811;AC=5;AF=0.416667;AN=12;AO=58;CIGAR=1X;DP=276;DPB=276;DPRA=0;EPP=128.956;EPPR=476.391;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2231;QR=8311;RO=218;RPL=0;RPP=128.956;RPPR=476.391;RPR=58;RUN=1;SAF=58;SAP=128.956;SAR=0;SRF=218;SRP=476.391;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:43:30,13:30:1149:13:497:-32.1329,0,-90.7665 0/1:45:28,17:28:1076:17:659:-46.1008,0,-83.5991 0/1:29:18,11:18:682:11:418:-29.2397,0,-52.9813 0/0:83:76,7:76:2886:7:273:0,-0.047477,-234.981 0/1:24:21,3:21:794:3:112:-3.22158,0,-64.5595 0/1:52:45,7:45:1724:7:272:-9.19367,0,-139.764 dDocent_Contig_10879 146 . C T 704.755 . AB=0.345679;ABP=19.7655;AC=3;AF=0.25;AN=12;AO=30;CIGAR=1X;DP=577;DPB=577;DPRA=0.142539;EPP=68.1545;EPPR=1190.81;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1182;QR=21520;RO=547;RPL=0;RPP=68.1545;RPPR=1190.81;RPR=30;RUN=1;SAF=0;SAP=68.1545;SAR=30;SRF=0;SRP=1190.81;SRR=547;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:21,12:21:832:12:453:-31.1811,0,-65.2596 0/0:47:45,2:45:1733:2:82:0,-6.36873,-148.43 0/1:31:20,11:20:750:11:447:-31.2541,0,-58.4786 0/1:17:12,5:12:461:5:200:-13.262,0,-36.7187 0/0:206:206,0:206:8104:0:0:0,-62.0122,-728.949 0/0:243:243,0:243:9640:0:0:0,-73.1503,-867.016 dDocent_Contig_10881 9 . G A 1010.23 . AB=0.272727;ABP=81.9729;AC=6;AF=0.5;AN=12;AO=48;CIGAR=1X;DP=176;DPB=176;DPRA=0;EPP=107.241;EPPR=280.959;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.729167;PAIREDR=0.765625;PAO=0;PQA=0;PQR=0;PRO=0;QA=1812;QR=4893;RO=128;RPL=0;RPP=107.241;RPPR=280.959;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=128;SRP=280.959;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:43:37,6:37:1412:6:224:-7.57355,0,-114.416 0/1:30:25,5:25:956:5:187:-8.16096,0,-77.3215 0/1:10:6,4:6:234:4:156:-11.407,0,-18.4208 0/1:37:28,9:28:1066:9:343:-20.0889,0,-85.1063 0/1:23:8,15:8:298:15:554:-43.2682,0,-20.2499 0/1:33:24,9:24:927:9:348:-21.7464,0,-73.8118 dDocent_Contig_10882 63 . T C 1429.7 . AB=0.19708;ABP=330.586;AC=4;AF=0.333333;AN=12;AO=85;CIGAR=1X2M1X;DP=477;DPB=477;DPRA=0;EPP=187.585;EPPR=791.255;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.894118;PAIREDR=0.707989;PAO=0;PQA=0;PQR=0;PRO=0;QA=2826;QR=11967;RO=363;RPL=40;RPP=3.64897;RPPR=21.1059;RPR=45;RUN=1;SAF=40;SAP=3.64897;SAR=45;SRF=209;SRP=21.1059;SRR=154;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:75:52,23,0:52:1716:23,0:735,0:-43.8728,0,-132.146,-59.5264,-139.07,-198.273 0|1:52:42,10,0:42:1392:10,0:338,0:-15.0944,0,-109.92,-27.7376,-112.931,-140.332 0|0:66:58,4,3:58:1943:4,3:138,103:0,-6.2258,-162.411,-9.08358,-155.251,-165.56 0|1:107:77,30,0:77:2491:30,0:1016,0:-59.5382,0,-192.24,-82.7175,-201.271,-283.654 0|0:99:74,8,17:74:2469:8,17:266,580:-24.7943,-25.5489,-223,0,-178.342,-194.749 0|1:78:60,10,8:60:1956:10,8:333,261:-8.89203,0,-154.918,-5.88161,-136.853,-161.395 dDocent_Contig_10887 29 . T C 3769.31 . AB=0.0535012;ABP=2203.91;AC=1;AF=0.0833333;AN=12;AO=68;CIGAR=2X2M1X1M1X3M1X6M1X5M;DP=1271;DPB=1052.78;DPRA=0;EPP=142.112;EPPR=862.913;GTI=0;LEN=1;MEANALT=25.8333;MQM=58.5294;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=0;PAIREDR=0.260101;PAO=1;PQA=40;PQR=0;PRO=0;QA=2660;QR=15532;RO=396;RPL=2;RPP=133.81;RPPR=862.913;RPR=66;RUN=1;SAF=67;SAP=142.112;SAR=1;SRF=396;SRP=862.913;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:166:52,1,22,1,21,10,10,5,9,1:52:2005:1,22,1,21,10,10,5,9,1:18,760,39,810,297,395,188,336,40:-50.5341,-65.1381,-229.486,-9.11055,-172.712,-167.139,-63.0021,-226.602,-170.576,-227.351,0,-163.606,-107.58,-161.47,-158.334,-45.1792,-208.778,-152.753,-206.642,-143.647,-206.817,-33.9066,-197.509,-141.483,-195.374,-132.377,-177.55,-195.549,-51.6309,-215.231,-159.206,-213.096,-150.1,-195.272,-184.003,-214.776,-40.8744,-204.475,-148.45,-202.34,-139.343,-184.516,-173.247,-190.969,-202.816,-62.9345,-226.534,-170.508,-224.399,-161.403,-206.575,-195.306,-213.028,-202.272,-227.283 0|0:278:143,0,10,0,13,34,5,15,1,12:143:5612:0,10,0,13,34,5,15,1,12:0,317,0,498,1049,177,548,37,469:-32.2019,-75.2492,-536.825,-51.7353,-513.312,-510.301,-75.2492,-536.825,-513.312,-536.825,-34.475,-496.056,-472.543,-496.056,-492.143,0,-461.573,-438.06,-461.573,-420.805,-451.338,-61.1725,-522.75,-499.236,-522.75,-481.981,-447.498,-521.245,-31.8275,-493.408,-469.895,-493.408,-452.639,-418.157,-479.333,-488.893,-72.4485,-534.025,-510.511,-534.025,-493.256,-458.773,-519.949,-490.608,-533.724,-36.7389,-498.32,-474.807,-498.32,-457.551,-423.068,-484.245,-454.903,-495.52,-494.708 0|0:144:51,0,9,9,19,10,2,7,4,6:51:2015:0,9,9,19,10,2,7,4,6:0,324,359,739,340,80,245,145,227:-45.29,-60.6425,-226.471,-35.3003,-201.13,-198.42,-31.5225,-197.354,-172.012,-194.644,0,-165.834,-140.493,-136.716,-160.115,-35.0071,-200.835,-175.494,-171.718,-140.199,-197.825,-54.0582,-219.887,-194.546,-190.77,-159.251,-194.251,-219.285,-41.8499,-207.679,-182.337,-178.561,-147.042,-182.043,-201.095,-205.571,-49.6551,-215.484,-190.142,-186.366,-154.847,-189.848,-208.9,-196.691,-214.28,-42.5311,-208.361,-183.019,-179.243,-147.724,-182.725,-201.777,-189.568,-197.373,-206.554 0|0:229:71,0,20,4,17,37,7,12,8,1:71:2794:0,20,4,17,37,7,12,8,1:0,667,155,666,1074,271,416,302,39:-54.5576,-75.9307,-305.789,-25.2762,-255.136,-249.116,-63.4709,-293.33,-242.678,-292.126,-21.3351,-251.198,-200.545,-238.739,-246.081,0,-229.856,-179.206,-217.397,-175.266,-218.718,-53.7932,-283.653,-233.001,-271.194,-229.062,-207.721,-281.546,-44.8222,-274.682,-224.03,-262.223,-220.091,-198.75,-252.546,-271.07,-53.2449,-283.105,-232.452,-270.646,-228.513,-207.172,-260.969,-251.997,-280.696,-72.7244,-302.583,-251.93,-290.124,-247.992,-226.65,-280.447,-271.476,-279.898,-302.282 0|1:201:24,21,24,1,3,27,34,7,0,27:24:940:21,24,1,3,27,34,7,0,27:498,570,35,121,811,1318,249,0,1049:-109.54,-83.9508,-154.932,-79.1865,-123.679,-149.265,-113.946,-158.435,-153.67,-190.949,-106.892,-151.381,-146.617,-181.376,-183.293,-59.2154,-103.708,-98.9443,-133.701,-126.647,-128.392,-8.89664,-53.3913,-48.6271,-83.3859,-76.3316,-28.6552,-75.9702,-97.607,-142.097,-137.333,-172.092,-165.038,-117.362,-67.0469,-172.804,-116.765,-161.254,-156.49,-191.25,-184.196,-136.52,-86.2052,-174.911,-194.069,-30.5617,-75.055,-70.2907,-105.05,-97.9956,-50.3193,0,-88.711,-107.869,-99.7413 0|0:253:55,19,48,0,11,43,10,0,0,21:55:2166:19,48,0,11,43,10,0,0,21:456,1513,0,428,1295,391,0,0,836:-96.0291,-82.407,-254.901,0,-148.043,-163.77,-112.586,-260.621,-178.219,-290.8,-77.9579,-225.995,-143.593,-256.174,-252.863,-19.7678,-167.808,-85.408,-197.985,-163.359,-185.04,-80.5592,-228.596,-146.194,-258.775,-224.149,-165.96,-255.765,-112.586,-260.621,-178.219,-290.8,-256.174,-197.985,-258.775,-290.8,-112.586,-260.621,-178.219,-290.8,-256.174,-197.985,-258.775,-290.8,-290.8,-43.7929,-191.833,-109.43,-222.012,-187.385,-129.196,-189.987,-222.012,-222.012,-215.69 dDocent_Contig_10889 22 . G A 286.506 . AB=0.220588;ABP=49.1222;AC=1;AF=0.1;AN=10;AO=15;CIGAR=1X;DP=323;DPB=323;DPRA=1.06667;EPP=35.5824;EPPR=671.824;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=560;QR=12154;RO=308;RPL=0;RPP=35.5824;RPPR=671.824;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=308;SRP=671.824;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:111:111,0:111:4401:0:0:0,-33.4143,-396.04 0/0:97:97,0:97:3851:0:0:0,-29.1999,-346.6 0/0:45:45,0:45:1754:0:0:0,-13.5463,-158.082 0/0:2:2,0:2:81:0:0:0,-0.60206,-7.68573 ./.:.:.:.:.:.:.:. 0/1:68:53,15:53:2067:15:560:-30.2524,0,-165.753 dDocent_Contig_10890 1 . N G 1961.43 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=63;CIGAR=1X;DP=63;DPB=63;DPRA=0;EPP=139.813;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2148;QR=0;RO=0;RPL=0;RPP=139.813;RPPR=0;RPR=63;RUN=1;SAF=0;SAP=139.813;SAR=63;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:16:0,16:0:0:16:547:-49.5538,-4.81648,0 1/1:11:0,11:0:0:11:381:-34.6237,-3.31133,0 1/1:10:0,10:0:0:10:349:-31.7468,-3.0103,0 1/1:10:0,10:0:0:10:339:-30.8385,-3.0103,0 1/1:10:0,10:0:0:10:323:-29.3836,-3.0103,0 1/1:6:0,6:0:0:6:209:-19.1511,-1.80618,0 dDocent_Contig_10891 11 . T C 2625.9 . AB=0.502825;ABP=3.02257;AC=6;AF=0.5;AN=12;AO=89;CIGAR=1X3M;DP=177;DPB=177;DPRA=0;EPP=196.271;EPPR=178.9;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.950617;PAO=0;PQA=0;PQR=0;PRO=0;QA=3569;QR=3230;RO=81;RPL=0;RPP=196.271;RPPR=178.9;RPR=89;RUN=1;SAF=89;SAP=196.271;SAR=0;SRF=81;SRP=178.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:31:22,5,4:22:864:5,4:200,164:-9.84667,0,-69.5336,-2.92861,-57.4998,-72.7718 0|1:16:7,0,9:7:276:0,9:0,366:-28.4885,-30.5957,-53.2976,0,-23.1012,-20.3919 0|1:22:6,0,16:6:240:0,16:0,650:-52.2103,-54.0165,-73.7851,0,-20.1698,-15.3534 0|1:34:21,0,13:21:848:0,13:0,504:-35.4664,-41.788,-111.705,0,-70.3108,-66.3975 0|1:59:20,0,38:20:801:0,38:0,1522:-119.355,-125.375,-191.364,0,-65.9796,-54.5405 0|1:15:5,0,9:5:201:0,9:0,363:-28.4457,-29.9508,-46.5157,0,-16.5907,-13.8814 dDocent_Contig_10892 46 . G T 3341.71 . AB=0.467213;ABP=5.28857;AC=6;AF=0.6;AN=10;AO=119;CIGAR=1X;DP=249;DPB=249;DPRA=0;EPP=261.416;EPPR=283.13;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0.94958;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4594;QR=4868;RO=129;RPL=0;RPP=261.416;RPPR=283.13;RPR=119;RUN=1;SAF=119;SAP=261.416;SAR=0;SRF=129;SRP=283.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:106:35,70:35:1320:70:2704:-211.526,0,-87.0886 0/1:64:54,10:54:2008:10:385:-15.7401,0,-161.691 0/1:32:16,16:16:619:16:617:-46.231,0,-46.4148 0/1:42:24,18:24:921:18:697:-50.4176,0,-70.5632 ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:191:-17.5574,-1.50515,0 dDocent_Contig_10893 75 . G A 60.4598 . AB=0.2;ABP=18.6449;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=249;DPB=249;DPRA=0.813559;EPP=16.0391;EPPR=530.678;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=0.938272;PAO=0;PQA=0;PQR=0;PRO=0;QA=221;QR=8847;RO=243;RPL=6;RPP=16.0391;RPPR=530.678;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=243;SRP=530.678;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:52:50,2:50:1777:2:74:0,-8.62768,-153.179 0/0:86:86,0:86:3064:0:0:0,-25.8886,-275.979 0/1:20:16,4:16:615:4:147:-7.56885,0,-49.6688 0/0:66:66,0:66:2460:0:0:0,-19.868,-221.614 0/0:8:8,0:8:304:0:0:0,-2.40824,-27.7192 0/0:17:17,0:17:627:0:0:0,-5.11751,-56.7626 dDocent_Contig_10894 33 . C T 392.728 . AB=0.2;ABP=81.1833;AC=4;AF=0.333333;AN=12;AO=21;CIGAR=1X;DP=163;DPB=163;DPRA=1.35238;EPP=48.6112;EPPR=311.359;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.571429;PAIREDR=0.866197;PAO=0;PQA=0;PQR=0;PRO=0;QA=850;QR=5598;RO=142;RPL=0;RPP=48.6112;RPPR=311.359;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=142;SRP=311.359;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:11:10,1:10:402:1:41:-0.783237,0,-33.2254 0/1:31:19,12:19:732:12:485:-34.6677,0,-56.8563 0/1:22:20,2:20:803:2:80:-0.969131,0,-65.9605 0/0:42:41,1:41:1602:1:41:0,-8.54869,-140.321 0/0:21:21,0:21:840:0:0:0,-6.32163,-75.9123 0/1:36:31,5:31:1219:5:203:-7.81598,0,-99.144 dDocent_Contig_10895 192 . C G 470.621 . AB=0.384615;ABP=9.02361;AC=5;AF=0.416667;AN=12;AO=21;CIGAR=1X;DP=67;DPB=67;DPRA=0;EPP=48.6112;EPPR=102.898;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.891304;PAO=0;PQA=0;PQR=0;PRO=0;QA=818;QR=1778;RO=46;RPL=21;RPP=48.6112;RPPR=102.898;RPR=0;RUN=1;SAF=0;SAP=48.6112;SAR=21;SRF=0;SRP=102.898;SRR=46;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:10:7,3:7:272:3:117:-7.89991,0,-21.8366 0/1:13:5,8:5:199:8:309:-24.2557,0,-14.3755 0/1:3:2,1:2:78:1:40:-3.09259,0,-6.50038 0/1:5:1,4:1:40:4:156:-12.9118,0,-2.49053 0/0:15:14,1:14:543:1:40:0,-0.519771,-45.2196 0/1:21:17,4:17:646:4:156:-8.09549,0,-52.1502 dDocent_Contig_10896 13 . C T 394.119 . AB=0.138095;ABP=241.914;AC=2;AF=0.166667;AN=12;AO=47;CIGAR=1X;DP=590;DPB=590;DPRA=0.872727;EPP=105.07;EPPR=1173.43;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.744681;PAIREDR=0.925788;PAO=0;PQA=0;PQR=0;PRO=0;QA=1869;QR=21363;RO=539;RPL=0;RPP=105.07;RPPR=1173.43;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=539;SRP=1173.43;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:90:76,10:76:2972:10:400:-10.1279,0,-241.358 0/1:120:101,19:101:4011:19:759:-32.5058,0,-324.847 0/0:53:50,3:50:1956:3:121:0,-4.6746,-164.96 0/0:97:91,6:91:3659:6:236:0,-7.58962,-307.71 0/0:120:111,9:111:4360:9:353:0,-3.99433,-360.233 0/0:110:110,0:110:4405:0:0:0,-33.1133,-396.39 dDocent_Contig_10897 30 . G A 558.04 . AB=0.167464;ABP=203.752;AC=4;AF=0.4;AN=10;AO=39;CIGAR=1X;DP=263;DPB=263;DPRA=0;EPP=87.6977;EPPR=489.42;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0.871795;PAIREDR=0.96875;PAO=0;PQA=0;PQR=0;PRO=0;QA=1547;QR=8885;RO=224;RPL=0;RPP=87.6977;RPPR=489.42;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=224;SRP=489.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:76:67,9:67:2640:9:357:-9.61262,0,-214.844 0/1:43:29,14:29:1153:14:541:-36.0847,0,-91.1056 0/0:54:50,4:50:2000:4:163:0,-1.19719,-165.135 0/1:84:74,10:74:2930:10:404:-11.4341,0,-238.504 ./.:.:.:.:.:.:.:. 0/1:6:4,2:4:162:2:82:-5.9735,0,-13.1608 dDocent_Contig_10898 49 . T G 217.875 . AB=0.218182;ABP=40.9518;AC=3;AF=0.25;AN=12;AO=15;CIGAR=1X;DP=105;DPB=105;DPRA=0;EPP=27.4756;EPPR=135.132;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.866667;PAIREDR=0.822222;PAO=0;PQA=0;PQR=0;PRO=0;QA=573;QR=3493;RO=90;RPL=1;RPP=27.4756;RPPR=135.132;RPR=14;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=90;SRP=198.443;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:11,1:11:419:1:31:0,-0.512906,-34.953 0/1:26:22,4:22:858:4:163:-7.23165,0,-69.7034 0/0:25:24,1:24:930:1:40:0,-3.53007,-80.0004 0/1:22:15,7:15:589:7:267:-17.7657,0,-46.7238 0/1:7:6,1:6:234:1:33:-1.19192,0,-19.3218 0/0:13:12,1:12:463:1:39:0,-0.0168255,-38.1155 dDocent_Contig_10899 59 . A T 58.4411 . AB=0.214286;ABP=12.937;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=64;DPB=64;DPRA=1.4;EPP=9.52472;EPPR=135.47;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.819672;PAO=0;PQA=0;PQR=0;PRO=0;QA=121;QR=2380;RO=61;RPL=3;RPP=9.52472;RPPR=135.47;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=61;SRP=135.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:14:11,3:11:417:3:121:-7.06578,0,-33.6605 0/0:18:18,0:18:690:0:0:0,-5.41854,-62.4184 0/0:8:8,0:8:324:0:0:0,-2.40824,-29.5292 0/0:13:13,0:13:525:0:0:0,-3.91339,-47.5967 0/0:9:9,0:9:365:0:0:0,-2.70927,-33.2149 0/0:2:2,0:2:59:0:0:0,-0.60206,-5.60086 dDocent_Contig_10900 14 . T C 175.939 . AB=0.0922619;ABP=1458.59;AC=2;AF=0.166667;AN=12;AO=156;CIGAR=1X;DP=2128;DPB=2128;DPRA=0;EPP=341.76;EPPR=3978.17;GTI=0;LEN=1;MEANALT=1;MQM=50.8269;MQMR=59.9391;NS=6;NUMALT=1;ODDS=0;PAIRED=0.025641;PAIREDR=0.0522312;PAO=0;PQA=0;PQR=0;PRO=0;QA=6165;QR=78251;RO=1972;RPL=0;RPP=341.76;RPPR=4285.15;RPR=156;RUN=1;SAF=156;SAP=341.76;SAR=0;SRF=1936;SRP=3978.17;SRR=36;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:365:343,22:343:13560:22:871:0,-33.2582,-1142.77 0/1:655:595,60:595:23575:60:2378:-11.5561,0,-1922.05 0/0:214:196,18:196:7844:18:713:0,-1.43235,-642.549 0/1:353:320,33:320:12665:33:1312:-9.2596,0,-1032.7 0/0:222:213,9:213:8454:9:353:0,-34.7584,-728.331 0/0:319:305,14:305:12153:14:538:0,-48.2851,-1044.79 dDocent_Contig_10901 7 . T G 269.509 . AB=0.209877;ABP=62.2298;AC=5;AF=0.416667;AN=12;AO=19;CIGAR=1X;DP=212;DPB=212;DPRA=0.321705;EPP=44.2683;EPPR=404.913;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.979275;PAO=0;PQA=0;PQR=0;PRO=0;QA=593;QR=7349;RO=193;RPL=0;RPP=44.2683;RPPR=422.104;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=191;SRP=404.913;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:62:-5.88871,-0.60206,0 0/1:30:19,11:19:736:11:341:-21.9533,0,-57.5404 0/1:4:3,1:3:107:1:35:-2.29451,0,-8.77639 0/1:47:42,5:42:1603:5:155:-0.105493,0,-130.39 0/0:73:73,0:73:2789:0:0:0,-21.9752,-251.195 0/0:56:56,0:56:2114:0:0:0,-16.8577,-190.496 dDocent_Contig_10902 13 . C T 1354.65 . AB=0.228346;ABP=165.819;AC=4;AF=0.333333;AN=12;AO=69;CIGAR=8M1X1M;DP=420;DPB=414.6;DPRA=0;EPP=152.842;EPPR=695.71;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.984326;PAO=0;PQA=0;PQR=0;PRO=0;QA=2773;QR=12310;RO=319;RPL=0;RPP=152.842;RPPR=695.71;RPR=69;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=319;SRP=695.71;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:32:23,0,9,0:23:888:0,9,0:0,365,0:-23.5821,-30.5058,-103.419,0,-73.3129,-70.6037,-30.5058,-103.419,-73.3129,-103.419 0|1:81:38,17,26,0:38:1477:17,26,0:614,1054,0:-75.5038,-36.8466,-153.091,0,-71.2852,-113.564,-86.943,-158.208,-121.39,-208.315 0|0:68:63,0,4,1:63:2429:0,4,1:0,162,41:0,-18.9649,-218.404,-5.61052,-205.044,-203.84,-15.5798,-215.019,-201.66,-214.718 0|1:42:30,1,9,0:30:1160:1,9,0:37,352,0:-19.9056,-25.9114,-120.886,0,-92.2502,-92.5675,-28.9365,-121.187,-95.2767,-124.213 0|0:98:89,0,7,2:89:3423:0,7,2:0,275,81:0,-26.7917,-307.802,-4.18581,-285.186,-283.079,-20.1098,-301.122,-278.506,-300.52 0|1:99:76,0,14,9:76:2933:0,14,9:0,565,365:-23.6955,-46.5738,-287.426,0,-240.849,-236.635,-16.4729,-257.325,-210.747,-254.615 dDocent_Contig_10903 95 . G C 240.689 . AB=0.180328;ABP=111.299;AC=4;AF=0.333333;AN=12;AO=24;CIGAR=1X;DP=175;DPB=175;DPRA=1.64211;EPP=55.1256;EPPR=330.903;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.875;PAIREDR=0.847682;PAO=0;PQA=0;PQR=0;PRO=0;QA=811;QR=5218;RO=151;RPL=24;RPP=55.1256;RPPR=330.903;RPR=0;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=151;SRP=330.903;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:28,7:28:976:7:243:-11.6728,0,-77.6188 0/1:35:30,5:30:1034:5:172:-5.28227,0,-82.8349 0/0:19:19,0:19:649:0:0:0,-5.71957,-58.7309 0/1:28:22,6:22:767:6:186:-8.61539,0,-60.9233 0/1:24:20,4:20:696:4:140:-5.72021,0,-55.7394 0/0:34:32,2:32:1096:2:70:0,-3.58762,-92.2999 dDocent_Contig_10905 1 . N G 65.5327 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=44;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=70;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.55218,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10906 15 . A T 7002.39 . AB=0.0625;ABP=162.614;AC=0;AF=0;AN=12;AO=6;CIGAR=1X2M1X2M1X5M;DP=424;DPB=413.5;DPRA=0;EPP=16.0391;EPPR=298.331;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.992647;PAO=0;PQA=0;PQR=0;PRO=0;QA=237;QR=5374;RO=136;RPL=0;RPP=16.0391;RPPR=298.331;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=136;SRP=298.331;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:44:26,0,7,2,9:26:1029:0,7,2,9:0,273,74,362:-22.0141,-29.8409,-114.532,-7.40491,-92.0941,-89.9869,-23.7899,-108.479,-86.0416,-107.877,0,-84.6971,-62.2595,-78.6446,-81.9878 0|0:72:41,0,10,11,10:41:1622:0,10,11,10:0,394,388,404:-20.9739,-33.3162,-166.811,-0.896273,-134.396,-131.385,-1.74819,-135.233,-102.819,-131.922,0,-133.502,-101.087,-101.926,-130.492 0|0:24:10,0,2,0,12:10:398:0,2,0,12:0,82,0,484:-36.8799,-39.8902,-72.6599,-33.1211,-65.891,-65.2889,-39.8902,-72.6599,-65.891,-72.6599,0,-32.7623,-25.9922,-32.7623,-29.15 0|0:57:35,0,0,7,15:35:1379:0,0,7,15:0,0,267,609:-39.7076,-50.2436,-163.692,-50.2436,-163.692,-163.692,-28.3499,-141.792,-141.792,-139.685,0,-113.461,-113.461,-91.5617,-108.946 0|0:96:14,6,0,0,75:14:551:6,0,0,75:237,0,0,3019:-244.64,-229.352,-272.872,-248.855,-274.678,-294.181,-248.855,-274.678,-294.181,-294.181,0,-25.8453,-45.354,-45.354,-22.7768 0|0:131:10,0,12,1,105:10:395:0,12,1,105:0,470,36,4179:-347.235,-350.245,-382.749,-311.602,-344.106,-340.494,-347.308,-379.812,-341.169,-379.511,-6.14145,-38.6584,0,-35.7215,-7.05024 dDocent_Contig_10907 9 . C A 48.9833 . AB=0.5;ABP=3.0103;AC=1;AF=0.1;AN=10;AO=3;CIGAR=1X;DP=262;DPB=262;DPRA=0.302752;EPP=9.52472;EPPR=565.422;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=116;QR=9932;RO=259;RPL=0;RPP=9.52472;RPPR=565.422;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=259;SRP=565.422;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:4:2,2:2:78:2:78:-6.19935,0,-6.19935 0/0:79:79,0:79:3016:0:0:0,-23.7814,-271.598 0/0:40:39,1:39:1490:1:38:0,-8.24393,-130.571 0/0:54:54,0:54:2084:0:0:0,-16.2556,-187.79 0/0:85:85,0:85:3264:0:0:0,-25.5875,-293.902 ./.:.:.:.:.:.:.:. dDocent_Contig_10908 28 . T C 36.8877 . AB=0.166667;ABP=20.3821;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=106;DPB=106;DPRA=1.78571;EPP=11.6962;EPPR=205.301;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=58.9802;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.970297;PAO=0;PQA=0;PQR=0;PRO=0;QA=155;QR=3835;RO=101;RPL=0;RPP=11.6962;RPPR=213.729;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=100;SRP=213.729;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:22,0:22:846:0:0:0,-6.62266,-76.0598 0/0:32:31,1:31:1188:1:41:0,-5.53839,-103.11 0/0:16:16,0:16:578:0:0:0,-4.81648,-46.4536 0/1:18:15,3:15:571:3:114:-5.21155,0,-46.3091 0/0:10:10,0:10:376:0:0:0,-3.0103,-34.1864 0/0:7:7,0:7:276:0:0:0,-2.10721,-25.209 dDocent_Contig_10911 9 . C T 39571.3 . AB=0.485;ABP=10.4367;AC=6;AF=0.5;AN=12;AO=1843;CIGAR=1X;DP=3800;DPB=3800;DPRA=0;EPP=4005.03;EPPR=4185.28;GTI=0;LEN=1;MEANALT=2.33333;MQM=40.7661;MQMR=57.1913;NS=6;NUMALT=1;ODDS=0;PAIRED=0.000542594;PAIREDR=0.0610134;PAO=0;PQA=0;PQR=0;PRO=0;QA=70307;QR=74363;RO=1934;RPL=0;RPP=4005.03;RPPR=4202.64;RPR=1843;RUN=1;SAF=1843;SAP=4005.03;SAR=0;SRF=1932;SRP=4185.28;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:476:257,217:257:9879:217:8272:-469.857,0,-732.438 0/1:810:423,382:423:16277:382:14587:-766.125,0,-1145.29 0/1:436:240,193:240:9190:193:7361:-409.92,0,-666.526 0/1:745:396,342:396:15245:342:13064:-709.519,0,-1106.02 0/1:587:280,303:280:10753:303:11524:-703.668,0,-772.603 0/1:746:338,406:338:13019:406:15499:-909.263,0,-940.823 dDocent_Contig_10912 9 . C T 32.1757 . AB=0.0924855;ABP=252.554;AC=3;AF=0.25;AN=12;AO=32;CIGAR=1M1X1M;DP=378;DPB=437;DPRA=0;EPP=72.4974;EPPR=663.138;GTI=0;LEN=1;MEANALT=3;MQM=45.8438;MQMR=54.4276;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=0.8125;PAIREDR=0.861842;PAO=0;PQA=0;PQR=95.5;PRO=3;QA=1106;QR=11574;RO=304;RPL=0;RPP=72.4974;RPPR=663.138;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=304;SRP=663.138;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:80:59,2,9:59:2222:2,9:42,235:0,-15.1348,-184.931,-0.712874,-168.452,-168.377 0|1:55:43,3,5:43:1646:3,5:63,194:-3.0536,-12.0744,-144.313,0,-129.289,-131.731 0|0:64:57,0,4:57:2186:0,4:0,132:0,-17.1587,-189.884,-6.90619,-179.613,-178.409 0|1:63:54,0,6:54:2058:0,6:0,234:-2.52862,-18.7842,-164.75,0,-145.906,-144.1 0|1:55:42,7,5:42:1597:7,5:187,194:-2.81948,-2.61125,-120.335,0,-107.032,-118.42 0|0:61:49,2,3:49:1865:2,3:44,117:0,-11.966,-156.838,-5.63332,-148.326,-150.235 dDocent_Contig_10913 23 . G C 236.497 . AB=0.22;ABP=37.059;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=282;DPB=282;DPRA=1.07759;EPP=26.8965;EPPR=591.479;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.826568;PAO=0;PQA=0;PQR=0;PRO=0;QA=443;QR=10644;RO=271;RPL=0;RPP=26.8965;RPPR=591.479;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=271;SRP=591.479;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:39,0:39:1550:0:0:0,-11.7402,-139.739 0/0:50:50,0:50:1978:0:0:0,-15.0515,-178.218 0/0:54:54,0:54:2113:0:0:0,-16.2556,-190.35 0/0:39:39,0:39:1534:0:0:0,-11.7402,-138.292 0/0:50:50,0:50:1953:0:0:0,-15.0515,-175.973 0/1:50:39,11:39:1516:11:443:-25.1726,0,-121.632 dDocent_Contig_10914 16 . T A 43.2413 . AB=0.109589;ABP=99.6557;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=215;DPB=215;DPRA=1.08738;EPP=26.8965;EPPR=443.819;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.363636;PAIREDR=0.64532;PAO=0;PQA=0;PQR=0;PRO=0;QA=425;QR=8144;RO=203;RPL=0;RPP=26.8965;RPPR=443.819;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=203;SRP=443.819;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:36,3:36:1420:3:119:0,-0.645155,-116.948 0/1:43:38,4:38:1523:4:145:-0.593683,0,-124.547 0/0:20:20,0:20:807:0:0:0,-6.0206,-72.9426 0/1:30:26,4:26:1058:4:161:-5.844,0,-86.4751 0/0:47:47,0:47:1877:0:0:0,-14.1484,-169.125 0/0:36:36,0:36:1459:0:0:0,-10.8371,-131.552 dDocent_Contig_10915 107 . N A 95.1727 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=102;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:102:-9.51673,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10917 93 . T G 34.6922 . AB=0.15625;ABP=35.8538;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=131;DPB=131;DPRA=1.61616;EPP=13.8677;EPPR=274.444;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.84;PAO=0;PQA=0;PQR=0;PRO=0;QA=159;QR=4139;RO=125;RPL=5;RPP=13.8677;RPPR=274.444;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=125;SRP=274.444;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:866:0:0:0,-7.82678,-78.2485 0/0:32:32,0:32:1035:0:0:0,-9.63296,-93.4425 0/0:14:13,0:13:430:0:0:0,-3.91339,-38.6703 0/0:7:7,0:7:242:0:0:0,-2.10721,-22.1177 0/1:32:27,5:27:907:5:159:-4.99195,0,-72.3064 0/0:20:20,0:20:659:0:0:0,-6.0206,-59.6216 dDocent_Contig_10918 48 . A T 588.576 . AB=0.415094;ABP=6.32897;AC=3;AF=0.25;AN=12;AO=22;CIGAR=1X;DP=84;DPB=84;DPRA=1.70968;EPP=50.7827;EPPR=129.096;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.818182;PAIREDR=0.887097;PAO=0;PQA=0;PQR=0;PRO=0;QA=877;QR=2479;RO=62;RPL=0;RPP=50.7827;RPPR=129.096;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=62;SRP=137.642;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:15:10,5:10:397:5:200:-13.8643,0,-31.573 0/0:21:21,0:21:839:0:0:0,-6.32163,-75.8229 0/1:19:11,8:11:447:8:315:-22.9909,0,-34.8663 0/1:19:10,9:10:408:9:362:-27.2242,0,-31.361 0/0:3:3,0:3:106:0:0:0,-0.90309,-9.88551 0/0:7:7,0:7:282:0:0:0,-2.10721,-25.7526 dDocent_Contig_10919 38 . T C 263.154 . AB=0.266667;ABP=24.2907;AC=3;AF=0.25;AN=12;AO=13;CIGAR=1X;DP=113;DPB=113;DPRA=1.21212;EPP=31.2394;EPPR=220.158;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.461538;PAIREDR=0.88;PAO=0;PQA=0;PQR=0;PRO=0;QA=511;QR=3996;RO=100;RPL=0;RPP=31.2394;RPPR=220.158;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=100;SRP=220.158;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:395:0:0:0,-3.0103,-35.9049 0/1:25:21,4:21:831:4:161:-7.34952,0,-67.5757 0/1:6:2,4:2:81:4:163:-13.2522,0,-5.87955 0/1:14:10,4:10:401:4:164:-10.9355,0,-32.2355 0/0:35:34,1:34:1369:1:23:0,-8.23614,-121.167 0/0:23:23,0:23:919:0:0:0,-6.92369,-83.0168 dDocent_Contig_10920 20 . T A 708.343 . AB=0;ABP=0;AC=2;AF=0.2;AN=10;AO=27;CIGAR=1X;DP=121;DPB=121;DPRA=1.08696;EPP=45.5551;EPPR=207.129;GTI=0;LEN=1;MEANALT=1;MQM=50.4444;MQMR=60;NS=5;NUMALT=1;ODDS=3.46945e-18;PAIRED=0;PAIREDR=0.957447;PAO=0;PQA=0;PQR=0;PRO=0;QA=944;QR=3711;RO=94;RPL=0;RPP=61.6401;RPPR=207.129;RPR=27;RUN=1;SAF=2;SAP=45.5551;SAR=25;SRF=94;SRP=207.129;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:755:0:0:0,-5.71957,-68.2733 0/0:35:33,2:33:1304:2:75:0,-3.428,-110.516 0/0:27:27,0:27:1055:0:0:0,-8.12781,-95.23 0/0:15:14,1:14:556:1:41:0,-0.420883,-46.2895 ./.:.:.:.:.:.:.:. 1/1:25:1,24:1:41:24:828:-70.436,-3.43118,0 dDocent_Contig_10921 7 . T C 51584.7 . AB=0.76943;ABP=976.55;AC=8;AF=0.666667;AN=12;AO=1688;CIGAR=1X3M;DP=2092;DPB=2092;DPRA=0;EPP=3337.53;EPPR=615.366;GTI=0;LEN=1;MEANALT=5.83333;MQM=56.9165;MQMR=59.5461;NS=6;NUMALT=2;ODDS=0;PAIRED=0.832346;PAIREDR=0.975177;PAO=0;PQA=0;PQR=0;PRO=0;QA=63576;QR=10763;RO=282;RPL=0;RPP=3668.46;RPPR=615.366;RPR=1688;RUN=1;SAF=1649;SAP=3337.53;SAR=39;SRF=282;SRP=615.366;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:317:37,5,266:37:1418:5,266:186,9732:-775.702,-772.045,-884.358,0,-99.0197,-33.7399 0|1:458:103,8,332:103:3922:8,332:299,12655:-1001.18,-1010.49,-1329.78,0,-300.024,-221.77 1|1:258:19,3,223:19:735:3,223:116,8455:-689.776,-687.188,-746.661,-6.7516,-58.8255,0 0|1:443:53,23,345:53:2036:23,345:892,13039:-1048.71,-1000.89,-1161.1,0,-103.388,-63.2971 1|1:290:3,9,277:3:116:9,277:342,10451:-918.513,-893.3,-900.119,-73.8508,-57.2908,0 0|1:326:67,11,245:67:2536:11,245:417,9244:-731.823,-719.881,-924.467,0,-175.808,-134.164 dDocent_Contig_10922 12 . T A 101.329 . AB=0.363636;ABP=4.78696;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=117;DPB=117;DPRA=0.6;EPP=13.8677;EPPR=246.215;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.4;PAIREDR=0.535714;PAO=0;PQA=0;PQR=0;PRO=0;QA=202;QR=4471;RO=112;RPL=0;RPP=13.8677;RPPR=246.215;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=112;SRP=246.215;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1069:0:0:0,-8.12781,-96.4928 0/1:11:7,4:7:281:4:162:-11.6556,0,-22.3508 0/0:16:15,1:15:593:1:40:0,-0.820801,-49.7124 0/0:27:27,0:27:1072:0:0:0,-8.12781,-96.7648 0/0:22:22,0:22:888:0:0:0,-6.62266,-80.2283 0/0:14:14,0:14:568:0:0:0,-4.21442,-51.4622 dDocent_Contig_10923 13 . G A 3021.53 . AB=0.630573;ABP=26.2603;AC=6;AF=0.5;AN=12;AO=99;CIGAR=1X;DP=157;DPB=157;DPRA=0;EPP=217.986;EPPR=128.956;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.888889;PAIREDR=0.844828;PAO=0;PQA=0;PQR=0;PRO=0;QA=3985;QR=2303;RO=58;RPL=0;RPP=217.986;RPPR=128.956;RPR=99;RUN=1;SAF=99;SAP=217.986;SAR=0;SRF=58;SRP=128.956;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:11,25:11:436:25:1019:-81.1638,0,-28.7574 0/1:28:6,22:6:233:22:883:-71.3502,0,-12.908 0/1:15:3,12:3:113:12:482:-39.2152,0,-6.02147 0/1:31:8,23:8:318:23:919:-73.6832,0,-19.6538 0/1:25:14,11:14:561:11:442:-32.6097,0,-43.307 0/1:22:16,6:16:642:6:240:-15.3528,0,-51.4896 dDocent_Contig_10924 139 . A T 72.5185 . AB=0;ABP=0;AC=2;AF=0.2;AN=10;AO=3;CIGAR=1X1M1X;DP=131;DPB=131;DPRA=1.30714;EPP=9.52472;EPPR=278.787;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=8.67362e-19;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=104;QR=4177;RO=127;RPL=0;RPP=9.52472;RPPR=278.787;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=278.787;SRR=127;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 0|0:29:28,0:28:925:0:0:0,-8.42884,-83.4754 0|0:24:24,0:24:771:0:0:0,-7.22472,-69.6901 0|0:17:17,0:17:552:0:0:0,-5.11751,-49.99 .:.:.:.:.:.:.:. 0|0:59:58,1:58:1929:1:35:0,-14.2621,-170.387 dDocent_Contig_10925 9 . C T 1741.12 . AB=0.138235;ABP=1162.5;AC=3;AF=0.25;AN=12;AO=142;CIGAR=1X;DP=1455;DPB=1455;DPRA=1.95777;EPP=311.359;EPPR=2854.15;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.7875;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993145;PAO=0;PQA=0;PQR=0;PRO=0;QA=5413;QR=50289;RO=1313;RPL=0;RPP=311.359;RPPR=2854.15;RPR=142;RUN=1;SAF=142;SAP=311.359;SAR=0;SRF=1313;SRP=2854.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:107:107,0:107:4120:0:0:0,-32.2102,-370.878 0/1:204:186,18:186:7125:18:679:-0.0295417,0,-579.697 0/0:139:138,1:138:5274:1:39:0,-37.9466,-470.762 0/1:275:222,53:222:8517:53:2022:-99.4318,0,-683.501 0/0:189:189,0:189:7289:0:0:0,-56.8947,-655.812 0/1:541:471,70:471:17964:70:2673:-77.9009,0,-1444.43 dDocent_Contig_10926 7 . T C 36.1119 . AB=0.131579;ABP=47.8112;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=129;DPB=129;DPRA=1.15789;EPP=20.3821;EPPR=265.758;GTI=0;LEN=1;MEANALT=1;MQM=57.375;MQMR=56.2975;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.876033;PAO=0;PQA=0;PQR=0;PRO=0;QA=306;QR=4602;RO=121;RPL=0;RPP=20.3821;RPPR=265.758;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=121;SRP=265.758;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:720:0:0:0,-5.71957,-63.7934 0/1:20:18,2:18:681:2:77:-1.2757,0,-54.4305 0/0:30:29,1:29:1080:1:39:0,-5.13434,-90.0037 0/0:26:25,1:25:966:1:38:0,-4.0403,-83.4525 0/1:18:15,3:15:579:3:113:-5.12043,0,-44.8347 0/0:16:15,1:15:576:1:39:0,-0.933432,-47.0872 dDocent_Contig_10928 115 . A G 36.3165 . AB=0.173913;ABP=24.253;AC=2;AF=0.166667;AN=12;AO=4;CIGAR=1X;DP=78;DPB=78;DPRA=0.836364;EPP=11.6962;EPPR=163.699;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=140;QR=2587;RO=74;RPL=0;RPP=11.6962;RPPR=163.699;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=163.699;SRR=74;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029 0/1:5:3,2:3:106:2:70:-5.14225,0,-8.38395 0/0:3:3,0:3:85:0:0:0,-0.90309,-7.93011 0/1:18:16,2:16:568:2:70:-1.22886,0,-46.0335 0/0:18:18,0:18:623:0:0:0,-5.41854,-56.3928 0/0:27:27,0:27:953:0:0:0,-8.12781,-86.0845 dDocent_Contig_10929 107 . N A 75.5906 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:81:-7.55852,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10930 28 . A G 4620.64 . AB=0.445455;ABP=8.69561;AC=7;AF=0.583333;AN=12;AO=154;CIGAR=1X;DP=279;DPB=279;DPRA=0;EPP=337.417;EPPR=274.444;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6078;QR=4983;RO=125;RPL=0;RPP=337.417;RPPR=274.444;RPR=154;RUN=1;SAF=154;SAP=337.417;SAR=0;SRF=125;SRP=274.444;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:58:34,24:34:1353:24:959:-69.1536,0,-104.573 0/1:24:15,9:15:592:9:362:-25.7193,0,-46.3864 0/1:40:27,13:27:1079:13:516:-34.7438,0,-85.3551 0/1:28:22,6:22:885:6:235:-13.0893,0,-71.53 1/1:59:3,56:3:121:56:2226:-189.238,-6.48057,0 0/1:70:24,46:24:953:46:1780:-139.343,0,-64.999 dDocent_Contig_10932 159 . T C 66.1205 . AB=0.173913;ABP=24.253;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=134;DPB=134;DPRA=1.67123;EPP=13.8677;EPPR=233.439;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.953488;PAO=0;PQA=0;PQR=0;PRO=0;QA=203;QR=4353;RO=129;RPL=0;RPP=13.8677;RPPR=233.439;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=283.13;SRR=129;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:37,1:37:1248:1:40:0,-7.44346,-108.623 0/1:23:19,4:19:655:4:163:-8.13474,0,-52.3497 0/0:23:23,0:23:766:0:0:0,-6.92369,-69.2483 0/0:42:42,0:42:1419:0:0:0,-12.6433,-128.005 0/0:6:6,0:6:196:0:0:0,-1.80618,-17.9612 0/0:2:2,0:2:69:0:0:0,-0.60206,-6.55266 dDocent_Contig_10933 7 . T C 23990.6 . AB=0.746241;ABP=563.381;AC=6;AF=0.5;AN=12;AO=794;CIGAR=1X;DP=1064;DPB=1064;DPRA=0;EPP=1727.16;EPPR=587.136;GTI=0;LEN=1;MEANALT=1.16667;MQM=58.3275;MQMR=59.829;NS=6;NUMALT=1;ODDS=0;PAIRED=0.02267;PAIREDR=0.408922;PAO=0;PQA=0;PQR=0;PRO=0;QA=30418;QR=10214;RO=269;RPL=0;RPP=1727.16;RPPR=587.136;RPR=794;RUN=1;SAF=794;SAP=1727.16;SAR=0;SRF=269;SRP=587.136;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:163:49,114:49:1838:114:4318:-338.682,0,-116.605 0/1:163:44,119:44:1675:119:4544:-359.721,0,-101.565 0/1:133:56,77:56:2156:77:2968:-226.803,0,-154.231 0/1:205:65,140:65:2451:140:5345:-417.874,0,-159.084 0/1:172:25,146:25:960:146:5593:-451.181,0,-34.9355 0/1:228:30,198:30:1134:198:7650:-616.019,0,-33.7261 dDocent_Contig_10934 14 . T C 805.757 . AB=0.200957;ABP=165.351;AC=5;AF=0.416667;AN=12;AO=46;CIGAR=1X;DP=283;DPB=283;DPRA=0;EPP=102.898;EPPR=517.649;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0869565;PAIREDR=0.995781;PAO=0;PQA=0;PQR=0;PRO=0;QA=1841;QR=9547;RO=237;RPL=0;RPP=102.898;RPPR=517.649;RPR=46;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=237;SRP=517.649;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:53:40,13:40:1607:13:532:-32.2715,0,-128.904 0/1:24:20,4:20:815:4:146:-6.26713,0,-66.4395 0/1:66:55,11:55:2243:11:439:-19.9963,0,-182.152 0/0:74:70,4:70:2797:4:164:0,-7.12632,-236.688 0/1:25:22,3:22:874:3:114:-3.10347,0,-71.4408 0/1:41:30,11:30:1211:11:446:-28.1534,0,-96.9194 dDocent_Contig_10935 13 . T A 8427.41 . AB=0.738281;ABP=129.261;AC=7;AF=0.583333;AN=12;AO=265;CIGAR=1X;DP=337;DPB=337;DPRA=0;EPP=578.45;EPPR=159.356;GTI=0;LEN=1;MEANALT=1;MQM=59.8302;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.962264;PAIREDR=0.986111;PAO=0;PQA=0;PQR=0;PRO=0;QA=10508;QR=2901;RO=72;RPL=0;RPP=578.45;RPPR=159.356;RPR=265;RUN=1;SAF=265;SAP=578.45;SAR=0;SRF=72;SRP=159.356;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:53:17,36:17:683:36:1414:-111.538,0,-45.8452 0/1:94:17,77:17:682:77:3033:-244.701,0,-33.4113 1/1:81:5,76:5:195:76:3019:-253.883,-6.46194,0 0/1:64:15,49:15:611:49:1966:-157.869,0,-36.0616 0/1:33:15,18:15:607:18:728:-55.9107,0,-45.0344 0/1:12:3,9:3:123:9:348:-28.0613,0,-7.85243 dDocent_Contig_10936 1 . N G 128.845 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=8.80089;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=25.5;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=232;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=5;SAP=8.80089;SAR=1;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:37:-3.69783,-0.30103,0 1/1:3:0,3:0:0:3:119:-5.86202,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:76:-2.846,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_10937 10 . A G 63.2793 . AB=0.105769;ABP=143.404;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=282;DPB=282;DPRA=1.10227;EPP=14.7363;EPPR=183.568;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=56.8539;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.719101;PAO=0;PQA=0;PQR=0;PRO=0;QA=589;QR=10437;RO=267;RPL=0;RPP=35.5824;RPPR=582.793;RPR=15;RUN=1;SAF=12;SAP=14.7363;SAR=3;SRF=208;SRP=183.568;SRR=59;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:49:47,2:47:1810:2:70:0,-8.10307,-147.252 0/1:69:63,6:63:2465:6:238:-1.02072,0,-191.077 0/0:20:20,0:20:799:0:0:0,-6.0206,-66.9362 0/0:68:68,0:68:2643:0:0:0,-20.47,-234.067 0/1:35:30,5:30:1196:5:200:-7.84328,0,-97.3508 0/0:41:39,2:39:1524:2:81:0,-4.6565,-129.72 dDocent_Contig_10938 25 . T C 1356.57 . AB=0.505495;ABP=3.03416;AC=6;AF=0.6;AN=10;AO=48;CIGAR=1X;DP=93;DPB=93;DPRA=0;EPP=107.241;EPPR=100.727;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.958333;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1873;QR=1725;RO=45;RPL=0;RPP=107.241;RPPR=100.727;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=45;SRP=100.727;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:16,3:16:619:3:121:-5.56063,0,-50.3158 0/1:27:5,22:5:167:22:874:-70.8434,0,-7.22165 0/1:25:13,12:13:514:12:437:-32.1289,0,-39.0794 0/1:20:11,9:11:425:9:361:-26.8328,0,-32.5778 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:80:-7.59179,-0.60206,0 dDocent_Contig_10939 46 . C T 449.421 . AB=0.117359;ABP=523.15;AC=3;AF=0.25;AN=12;AO=73;CIGAR=1X1M1X;DP=886;DPB=886;DPRA=0;EPP=161.528;EPPR=1755.4;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.977805;PAO=0;PQA=0;PQR=0;PRO=0;QA=2888;QR=31550;RO=811;RPL=0;RPP=161.528;RPPR=1755.4;RPR=73;RUN=1;SAF=73;SAP=161.528;SAR=0;SRF=811;SRP=1764.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:246:228,17:228:8855:17:654:0,-14.9299,-737.368 0|1:154:139,15:139:5425:15:591:-7.16685,0,-441.786 0|1:142:119,23:119:4607:23:921:-40.4521,0,-371.87 0|0:123:116,6:116:4513:6:239:0,-14.9657,-384.309 0|0:108:106,2:106:4145:2:81:0,-24.8255,-365.377 0|1:113:103,10:103:4005:10:402:-2.52385,0,-326.467 dDocent_Contig_10940 14 . A T 211.995 . AB=0.152381;ABP=113.218;AC=4;AF=0.333333;AN=12;AO=20;CIGAR=1X;DP=186;DPB=186;DPRA=0;EPP=46.4397;EPPR=363.475;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=802;QR=6631;RO=166;RPL=0;RPP=46.4397;RPPR=363.475;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=166;SRP=363.475;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:20,2:20:791:2:81:-1.06307,0,-64.8836 0/1:24:18,6:18:708:6:234:-14.2031,0,-56.82 0/1:18:16,2:16:637:2:81:-2.26719,0,-52.2449 0/1:41:35,6:35:1411:6:243:-9.90595,0,-114.9 0/0:45:42,3:42:1675:3:122:0,-2.17386,-139.605 0/0:36:35,1:35:1409:1:41:0,-6.74251,-122.965 dDocent_Contig_10942 12 . A G 2233.86 . AB=0.335938;ABP=62.8615;AC=6;AF=0.5;AN=12;AO=86;CIGAR=1X4M;DP=256;DPB=256;DPRA=0;EPP=189.757;EPPR=339.589;GTI=0;LEN=1;MEANALT=1.83333;MQM=59.1628;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.993548;PAO=0;PQA=0;PQR=0;PRO=0;QA=3405;QR=6161;RO=155;RPL=0;RPP=189.757;RPPR=339.589;RPR=86;RUN=1;SAF=86;SAP=189.757;SAR=0;SRF=155;SRP=339.589;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:34:27,0,7,0:27:1071:0,7,0:0,276,0:-14.9723,-23.1001,-111.26,0,-88.5543,-86.4471,-23.1001,-111.26,-88.5543,-111.26 0|1:15:9,0,6,0:9:365:0,6,0:0,227,0:-16.2633,-18.9726,-49.0896,0,-30.5058,-28.6996,-18.9726,-49.0896,-30.5058,-49.0896 0|1:46:25,7,14,0:25:993:7,14,0:272,556,0:-38.3068,-29.4689,-109.102,0,-65.4449,-77.6059,-45.8325,-111.209,-81.8203,-127.591 0|1:46:21,2,21,0:21:835:2,21,0:81,831,0:-62.0018,-64.9271,-133.073,0,-65.4395,-62.514,-68.3234,-133.675,-68.8356,-137.077 0|1:65:46,0,15,4:46:1844:0,15,4:0,601,160:-35.5686,-49.416,-201.342,0,-151.927,-147.412,-36.2722,-188.199,-138.784,-186.994 0|1:50:27,0,23,0:27:1053:0,23,0:0,914,0:-67.4948,-75.6227,-162.166,0,-86.9365,-80.0128,-75.6227,-162.166,-86.9365,-162.166 dDocent_Contig_10943 60 . G T 508.068 . AB=0.403846;ABP=7.18621;AC=5;AF=0.416667;AN=12;AO=21;CIGAR=1X;DP=59;DPB=59;DPRA=1.48571;EPP=48.6112;EPPR=85.5263;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.952381;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=820;QR=1391;RO=38;RPL=21;RPP=48.6112;RPPR=85.5263;RPR=0;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=38;SRP=85.5263;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:256:0:0:0,-2.10721,-23.3897 0/1:10:8,2:8:301:2:78:-4.39317,0,-24.4361 0/1:10:4,6:4:149:6:235:-18.5104,0,-10.7624 0/1:7:4,3:4:143:3:119:-8.98818,0,-11.1128 0/1:13:7,6:7:265:6:233:-17.4246,0,-20.2962 0/1:12:8,4:8:277:4:155:-10.712,0,-21.6489 dDocent_Contig_10944 24 . A T 193.535 . AB=0.138889;ABP=125.337;AC=3;AF=0.25;AN=12;AO=17;CIGAR=1X;DP=184;DPB=184;DPRA=1.11429;EPP=39.9253;EPPR=365.646;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.235294;PAIREDR=0.60479;PAO=0;PQA=0;PQR=0;PRO=0;QA=693;QR=6536;RO=167;RPL=0;RPP=39.9253;RPPR=365.646;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=167;SRP=365.646;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:20,2:20:793:2:82:-1.15702,0,-65.0675 0/0:26:25,1:25:974:1:41:0,-3.73221,-83.8634 0/0:22:21,1:21:806:1:40:0,-2.62698,-68.845 0/1:44:38,6:38:1504:6:245:-9.18415,0,-122.357 0/0:28:28,0:28:1098:0:0:0,-8.42884,-99.1074 0/1:42:35,7:35:1361:7:285:-13.3809,0,-110.102 dDocent_Contig_10945 7 . T C 2880.75 . AB=0.165079;ABP=309.919;AC=8;AF=0.666667;AN=12;AO=52;CIGAR=3X6M;DP=315;DPB=317.778;DPRA=0;EPP=115.927;EPPR=85.5263;GTI=0;LEN=1;MEANALT=7.5;MQM=19.5769;MQMR=59.3684;NS=6;NUMALT=9;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0.111111;PQA=3.88889;PQR=3.88889;PRO=0.111111;QA=1016;QR=1494;RO=38;RPL=0;RPP=115.927;RPPR=85.5263;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=38;SRP=85.5263;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:38:6,3,25,0,0,0,0,3,0,0:6:231:3,25,0,0,0,0,3,0,0:66,674,0,0,0,0,40,0,0:-45.1621,-42.7437,-60.8332,0,-14.8664,-11.5482,-46.9683,-61.7363,-19.0739,-65.9593,-46.9683,-61.7363,-19.0739,-65.9593,-65.9593,-46.9683,-61.7363,-19.0739,-65.9593,-65.9593,-65.9593,-46.9683,-61.7363,-19.0739,-65.9593,-65.9593,-65.9593,-65.9593,-45.0681,-59.8378,-17.2076,-64.0591,-64.0591,-64.0591,-64.0591,-63.1561,-46.9683,-61.7363,-19.0739,-65.9593,-65.9593,-65.9593,-65.9593,-64.0591,-65.9593,-46.9683,-61.7363,-19.0739,-65.9593,-65.9593,-65.9593,-65.9593,-64.0591,-65.9593,-65.9593 0|1:67:12,0,25,7,3,0,2,5,5,6:12:469:0,25,7,3,0,2,5,5,6:0,767,140,114,0,24,90,92,222:-52.5173,-56.1296,-94.7144,0,-38.611,-31.0852,-47.5298,-86.1156,-30.0184,-84.0084,-52.7249,-91.3101,-35.2092,-82.7126,-90.407,-56.1296,-94.7144,-38.611,-86.1156,-91.3101,-94.7144,-55.0941,-93.6786,-37.5781,-85.0809,-90.2748,-93.6786,-93.0766,-50.8696,-89.4548,-33.3564,-80.8583,-86.0514,-89.4548,-88.4198,-87.9496,-50.6976,-89.2829,-33.1843,-80.6863,-85.8795,-89.2829,-88.2479,-84.0249,-87.7777,-38.6317,-77.2219,-21.1108,-68.6233,-73.8177,-77.2219,-76.1864,-71.9625,-71.7906,-75.4157 0|1:40:5,0,22,1,0,0,0,2,1,3:5:199:0,22,1,0,0,0,2,1,3:0,743,20,0,0,0,34,5,120:-54.3164,-55.8216,-72.2242,0,-16.4455,-9.82281,-54.5944,-70.9971,-15.2198,-70.696,-55.8216,-72.2242,-16.4455,-70.9971,-72.2242,-55.8216,-72.2242,-16.4455,-70.9971,-72.2242,-72.2242,-55.8216,-72.2242,-16.4455,-70.9971,-72.2242,-72.2242,-72.2242,-53.8994,-70.3018,-14.5285,-69.0751,-70.3018,-70.3018,-70.3018,-69.6998,-55.8833,-72.2854,-16.5129,-71.0586,-72.2854,-72.2854,-72.2854,-70.3636,-71.9844,-46.0423,-62.4479,-6.64794,-61.2208,-62.4479,-62.4479,-62.4479,-60.5256,-62.5094,-61.5448 1|1:40:5,0,10,1,0,7,0,4,0,5:5:199:0,10,1,0,7,0,4,0,5:0,269,19,0,267,0,78,0,199:-21.962,-23.4672,-39.8702,-4.86517,-21.2723,-18.262,-22.3297,-38.7328,-20.1364,-38.4317,-23.4672,-39.8702,-21.2723,-38.7328,-39.8702,-2.1916,-18.6023,0,-17.4649,-18.6023,-16.4951,-23.4672,-39.8702,-21.2723,-38.7328,-39.8702,-18.6023,-39.8702,-18.7314,-35.1345,-16.5435,-33.9978,-35.1345,-13.867,-35.1345,-33.9304,-23.4672,-39.8702,-21.2723,-38.7328,-39.8702,-18.6023,-39.8702,-35.1345,-39.8702,-7.48042,-23.8889,-5.28737,-22.7514,-23.8889,-2.61361,-23.8889,-19.1532,-23.8889,-22.3837 1|0:75:7,1,26,7,3,0,5,12,0,12:7:276:1,26,7,3,0,5,12,0,12:22,760,182,118,0,83,264,0,461:-66.939,-67.6378,-90.0028,-14.6541,-35.9207,-29.5017,-56.6688,-77.9276,-24.9541,-77.2286,-66.6287,-87.8864,-34.9142,-76.919,-88.3914,-69.0462,-90.3038,-37.3285,-79.3358,-89.2945,-91.7121,-64.4231,-85.6809,-32.7106,-74.714,-84.6723,-87.089,-85.5839,-52.1477,-73.4069,-20.4405,-62.4409,-72.399,-74.8147,-70.1948,-71.2024,-69.0462,-90.3038,-37.3285,-79.3358,-89.2945,-91.7121,-87.089,-74.8147,-91.7121,-31.728,-52.991,0,-42.0211,-51.982,-54.3994,-49.7764,-37.5002,-54.3994,-50.7871 1|1:55:3,1,20,1,3,0,0,26,1,0:3:120:1,20,1,3,0,0,26,1,0:22,547,26,115,0,0,510,12,0:-58.3997,-57.8936,-67.4891,-21.2269,-29.7227,-25.1115,-57.5336,-66.0212,-29.3623,-67.1291,-55.895,-64.3829,-27.7245,-64.0229,-64.8887,-59.3028,-67.7902,-31.1321,-67.4302,-65.7918,-69.1991,-59.3028,-67.7902,-31.1321,-67.4302,-65.7918,-69.1991,-69.1991,-28.1437,-36.6395,0,-36.2788,-34.6465,-38.0468,-38.0468,-30.2201,-58.7843,-67.2718,-30.6143,-66.9118,-65.2736,-68.6807,-68.6807,-37.5317,-68.3797,-59.3028,-67.7902,-31.1321,-67.4302,-65.7918,-69.1991,-69.1991,-38.0468,-68.6807,-69.1991 dDocent_Contig_10947 73 . G A 136.693 . AB=0.333333;ABP=7.35324;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=175;DPB=175;DPRA=1.39726;EPP=20.3821;EPPR=365.646;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=303;QR=6323;RO=167;RPL=8;RPP=20.3821;RPPR=365.646;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=167;SRP=365.646;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1139:0:0:0,-9.0309,-102.808 0/0:65:64,1:64:2400:1:39:0,-15.6704,-212.304 0/0:19:18,1:18:694:1:39:0,-1.82301,-58.8937 0/1:18:12,6:12:449:6:225:-15.1922,0,-35.3319 0/0:23:23,0:23:888:0:0:0,-6.92369,-80.2307 0/0:20:20,0:20:753:0:0:0,-6.0206,-68.092 dDocent_Contig_10948 124 . G C 441.254 . AB=0.215686;ABP=74.6263;AC=4;AF=0.333333;AN=12;AO=25;CIGAR=1X;DP=186;DPB=186;DPRA=0.707317;EPP=57.2971;EPPR=352.617;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.68;PAIREDR=0.813665;PAO=0;PQA=0;PQR=0;PRO=0;QA=990;QR=6403;RO=161;RPL=25;RPP=57.2971;RPPR=352.617;RPR=0;RUN=1;SAF=0;SAP=57.2971;SAR=25;SRF=0;SRP=352.617;SRR=161;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:19,3:19:739:3:123:-4.84213,0,-60.2042 0/0:43:40,3:40:1586:3:108:0,-2.87261,-132.9 0/0:41:41,0:41:1613:0:0:0,-12.3422,-145.389 0/1:23:21,2:21:851:2:82:-0.855988,0,-69.9767 0/1:23:16,7:16:642:7:278:-18.4656,0,-51.191 0/1:34:24,10:24:972:10:399:-26.0343,0,-77.5407 dDocent_Contig_10949 13 . T C 39.0264 . AB=0.125;ABP=42.0968;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=236;DPB=236;DPRA=0.784314;EPP=11.6962;EPPR=506.792;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0.491379;PAO=0;PQA=0;PQR=0;PRO=0;QA=163;QR=9045;RO=232;RPL=0;RPP=11.6962;RPPR=506.792;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=232;SRP=506.792;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1375:0:0:0,-10.536,-124.014 0/0:53:53,0:53:2099:0:0:0,-15.9546,-189.098 0/0:36:36,0:36:1400:0:0:0,-10.8371,-126.256 0/1:32:28,4:28:1097:4:163:-5.42547,0,-89.3842 0/0:45:45,0:45:1724:0:0:0,-13.5463,-155.387 0/0:35:35,0:35:1350:0:0:0,-10.536,-121.763 dDocent_Contig_10950 18 . G T 17691.2 . AB=0.662542;ABP=207.019;AC=3;AF=0.25;AN=12;AO=595;CIGAR=1X;DP=1072;DPB=1072;DPRA=4.41743;EPP=1295.04;EPPR=1036.63;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=22933;QR=18111;RO=476;RPL=0;RPP=1295.04;RPPR=1036.63;RPR=595;RUN=1;SAF=595;SAP=1295.04;SAR=0;SRF=476;SRP=1036.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:74:68,6:68:2547:6:236:0,-0.663778,-207.815 0/1:47:39,8:39:1458:8:317:-14.7478,0,-117.343 0/0:46:46,0:46:1730:0:0:0,-13.8474,-155.954 0/0:63:63,0:63:2411:0:0:0,-18.9649,-217.189 0/1:455:140,314:140:5379:314:12085:-950.003,0,-347.048 0/1:387:120,267:120:4586:267:10295:-809.594,0,-296.285 dDocent_Contig_10952 139 . G T 295.448 . AB=0.4;ABP=3.44459;AC=3;AF=0.25;AN=12;AO=9;CIGAR=1X;DP=94;DPB=94;DPRA=0.292683;EPP=22.5536;EPPR=187.585;GTI=0;LEN=1;MEANALT=1;MQM=51.1111;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.905882;PAO=0;PQA=0;PQR=0;PRO=0;QA=353;QR=3378;RO=85;RPL=0;RPP=22.5536;RPPR=187.585;RPR=9;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=187.585;SRR=85;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:40,0:40:1586:0:0:0,-12.0412,-142.973 0/0:11:11,0:11:445:0:0:0,-3.31133,-40.4055 0/0:19:19,0:19:773:0:0:0,-5.71957,-69.8887 0/0:12:12,0:12:455:0:0:0,-3.61236,-41.2823 0/1:5:3,2:3:119:2:69:-5.01184,0,-9.58986 1/1:7:0,7:0:0:7:284:-25.7547,-2.10721,0 dDocent_Contig_10953 87 . T C 321.453 . AB=0.296296;ABP=22.4731;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=98;DPB=98;DPRA=2.45455;EPP=37.7539;EPPR=181.071;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.987805;PAO=0;PQA=0;PQR=0;PRO=0;QA=566;QR=2864;RO=82;RPL=16;RPP=37.7539;RPPR=181.071;RPR=0;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=82;SRP=181.071;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:17,4:17:568:4:140:-6.62316,0,-45.1132 0/1:33:21,12:21:719:12:426:-28.7439,0,-55.0929 0/0:12:12,0:12:437:0:0:0,-3.61236,-39.6732 0/0:12:12,0:12:429:0:0:0,-3.61236,-38.949 0/0:6:6,0:6:201:0:0:0,-1.80618,-18.4184 0/0:14:14,0:14:510:0:0:0,-4.21442,-46.2397 dDocent_Contig_10954 67 . A C 123.902 . AB=0.106383;ABP=256.01;AC=2;AF=0.166667;AN=12;AO=52;CIGAR=1X;DP=662;DPB=662;DPRA=0;EPP=115.927;EPPR=1327.61;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0576923;PAIREDR=0.0934426;PAO=0;PQA=0;PQR=0;PRO=0;QA=2042;QR=23874;RO=610;RPL=52;RPP=115.927;RPPR=1327.61;RPR=0;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=610;SRP=1327.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:114:104,10:104:4046:10:403:-2.31244,0,-329.831 0/0:105:96,9:96:3752:9:341:0,-0.570169,-306.677 0/1:74:64,10:64:2483:10:391:-13.2655,0,-201.36 0/0:105:99,6:99:3877:6:240:0,-9.63249,-326.99 0/0:110:105,5:105:4172:5:200:0,-14.7338,-357.087 0/0:154:142,12:142:5544:12:467:0,-3.98782,-456.448 dDocent_Contig_10956 51 . A G 184.484 . AB=0.3;ABP=13.4334;AC=2;AF=0.25;AN=8;AO=9;CIGAR=1X3M1X;DP=54;DPB=54;DPRA=1.25;EPP=22.5536;EPPR=100.727;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=335;QR=1765;RO=45;RPL=9;RPP=22.5536;RPPR=100.727;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=45;SRP=100.727;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:20:14,6:14:561:6:222:-14.3174,0,-44.8134 0|0:15:15,0:15:590:0:0:0,-4.51545,-53.4383 0|0:9:9,0:9:353:0:0:0,-2.70927,-32.1298 0|1:10:7,3:7:261:3:113:-7.529,0,-20.8338 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_10957 123 . G A 8263.12 . AB=0.541226;ABP=9.99298;AC=8;AF=0.666667;AN=12;AO=340;CIGAR=1X;DP=558;DPB=558;DPRA=0;EPP=741.311;EPPR=476.391;GTI=0;LEN=1;MEANALT=1;MQM=48.8294;MQMR=59.9174;NS=6;NUMALT=1;ODDS=0;PAIRED=0.976471;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11433;QR=7372;RO=218;RPL=0;RPP=741.311;RPPR=476.391;RPR=340;RUN=1;SAF=0;SAP=741.311;SAR=340;SRF=0;SRP=476.391;SRR=218;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:68:26,42:26:885:42:1421:-105.514,0,-59.4915 0/1:115:63,52:63:2100:52:1745:-102.179,0,-154.65 0/1:110:33,77:33:1123:77:2609:-184.606,0,-68.2611 0/1:180:95,85:95:3229:85:2821:-196.664,0,-236.658 1/1:43:1,42:1:35:42:1427:-122.435,-9.52328,0 1/1:42:0,42:0:0:42:1410:-122.138,-12.6433,0 dDocent_Contig_10959 22 . C T 5495.83 . AB=0.0382979;ABP=873.244;AC=0;AF=0;AN=12;AO=18;CIGAR=1M2X;DP=649;DPB=649;DPRA=0;EPP=42.0968;EPPR=548.631;GTI=0;LEN=1;MEANALT=5.75;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=0;PAIREDR=0.456395;PAO=0;PQA=0;PQR=0;PRO=0;QA=699;QR=13419;RO=344;RPL=0;RPP=42.0968;RPPR=749.997;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=319;SRP=548.631;SRR=25;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:118:55,0,7,4,1,43:55:2143:0,7,4,1,43:0,273,146,41,1690:-122.445,-139.002,-315.128,-116.562,-292.689,-290.582,-127.082,-303.207,-280.768,-302.003,-135.618,-311.744,-289.304,-299.823,-311.443,0,-176.13,-153.69,-164.209,-172.746,-163.186 0|0:130:76,0,5,7,2,35:76:2922:0,5,7,2,35:0,195,287,76,1304:-83.8129,-106.691,-346.544,-90.6639,-330.518,-329.012,-82.9985,-322.854,-306.827,-320.747,-100.459,-340.312,-324.285,-316.622,-339.71,0,-239.84,-223.814,-216.15,-233.608,-229.304 0|0:95:34,1,0,8,0,47:34:1342:1,0,8,0,47:40,0,308,0,1885:-144.946,-151.886,-262.003,-155.181,-262.304,-265.599,-129.897,-237.019,-240.315,-237.906,-155.181,-262.304,-265.599,-240.315,-265.599,0,-107.131,-110.426,-85.1415,-110.426,-96.2775 0|0:106:61,0,5,12,3,24:61:2403:0,5,12,3,24:0,192,473,122,937:-58.6328,-76.9956,-274.677,-61.2363,-258.918,-257.413,-38.0835,-235.766,-220.007,-232.154,-66.9312,-264.614,-248.854,-225.703,-263.711,0,-197.682,-181.923,-158.771,-187.619,-190.458 0|0:116:73,0,1,5,6,29:73:2865:0,1,5,6,29:0,39,195,223,1156:-73.2285,-95.2037,-330.815,-91.9979,-327.61,-327.309,-79.1756,-314.787,-311.581,-313.282,-76.9575,-312.567,-309.361,-296.538,-310.761,0,-235.619,-232.414,-219.591,-217.371,-226.89 0|0:84:45,5,0,3,1,28:45:1744:5,0,3,1,28:203,0,123,41,1109:-77.7398,-74.5418,-216.301,-91.2862,-217.806,-234.549,-81.1324,-207.653,-224.396,-223.493,-87.9016,-214.422,-231.165,-221.012,-230.864,0,-126.527,-143.271,-133.118,-139.887,-134.842 dDocent_Contig_10960 10 . T A 38.2711 . AB=0.1875;ABP=16.582;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=53;DPB=53;DPRA=2.16216;EPP=3.73412;EPPR=111.584;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.333333;PAIREDR=0.86;PAO=0;PQA=0;PQR=0;PRO=0;QA=109;QR=1988;RO=50;RPL=0;RPP=9.52472;RPPR=111.584;RPR=3;RUN=1;SAF=2;SAP=3.73412;SAR=1;SRF=50;SRP=111.584;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:347:0:0:0,-2.70927,-31.5834 0/0:12:12,0:12:474:0:0:0,-3.61236,-43.01 0/0:4:4,0:4:163:0:0:0,-1.20412,-15.0584 0/0:10:10,0:10:405:0:0:0,-3.0103,-36.81 0/1:16:13,3:13:517:3:109:-5.3497,0,-42.0598 0/0:2:2,0:2:82:0:0:0,-0.60206,-7.77968 dDocent_Contig_10963 13 . C T 71.4988 . AB=0.130435;ABP=57.5803;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=155;DPB=155;DPRA=2.02597;EPP=20.3821;EPPR=120.019;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.625;PAIREDR=0.632653;PAO=0;PQA=0;PQR=0;PRO=0;QA=327;QR=5687;RO=147;RPL=0;RPP=20.3821;RPPR=322.217;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=118;SRP=120.019;SRR=29;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:860:0:0:0,-6.62266,-77.7062 0/1:46:40,6:40:1578:6:246:-8.67274,0,-128.407 0/0:32:30,2:30:1102:2:81:0,-1.94723,-91.7797 0/0:34:34,0:34:1297:0:0:0,-10.235,-116.987 0/0:15:15,0:15:606:0:0:0,-4.51545,-54.8778 0/0:6:6,0:6:244:0:0:0,-1.80618,-22.3386 dDocent_Contig_10964 24 . T C 798.129 . AB=0;ABP=0;AC=2;AF=0.2;AN=10;AO=29;CIGAR=2X;DP=203;DPB=203;DPRA=0.666667;EPP=65.983;EPPR=380.846;GTI=0;LEN=1;MEANALT=1;MQM=30.8966;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1150;QR=6899;RO=174;RPL=0;RPP=65.983;RPPR=380.846;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=174;SRP=380.846;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:78:78,0:78:3095:0:0:0,-23.4803,-278.635 0|0:37:37,0:37:1492:0:0:0,-11.1381,-134.524 0|0:37:37,0:37:1436:0:0:0,-11.1381,-129.495 .:.:.:.:.:.:.:. 0|0:22:22,0:22:876:0:0:0,-6.62266,-79.1483 1|1:29:0,29:0:0:29:1150:-79.4149,-8.72987,0 dDocent_Contig_10965 120 . T C 154.146 . AB=0.107143;ABP=40.5458;AC=5;AF=0.416667;AN=12;AO=8;CIGAR=1X;DP=95;DPB=95;DPRA=0.579545;EPP=3.0103;EPPR=191.928;GTI=0;LEN=1;MEANALT=1;MQM=59.75;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.862069;PAO=0;PQA=0;PQR=0;PRO=0;QA=302;QR=3087;RO=87;RPL=0;RPP=20.3821;RPPR=191.928;RPR=8;RUN=1;SAF=4;SAP=3.0103;SAR=4;SRF=0;SRP=191.928;SRR=87;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:37,0:37:1305:0:0:0,-11.1381,-117.752 0/1:28:25,3:25:892:3:119:-2.66655,0,-72.1715 0/0:7:7,0:7:250:0:0:0,-2.10721,-22.8468 0/0:19:18,1:18:640:1:36:0,-2.12129,-54.3312 1/1:2:0,2:0:0:2:78:-7.40158,-0.60206,0 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 dDocent_Contig_10966 95 . T G 51.3133 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=2;CIGAR=1X2M3X;DP=3;DPB=3;DPRA=2;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=24;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=76;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:76:-4.52791,-0.60206,0 1|1:1:0,0:0:0:0:0:0,0,0 .:.:.:.:.:.:.:. dDocent_Contig_10967 26 . A G 1722.71 . AB=0.330097;ABP=54.6618;AC=5;AF=0.416667;AN=12;AO=70;CIGAR=1X;DP=249;DPB=249;DPRA=0;EPP=155.013;EPPR=391.704;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.757143;PAIREDR=0.860335;PAO=0;PQA=0;PQR=0;PRO=0;QA=2759;QR=7089;RO=179;RPL=0;RPP=155.013;RPPR=391.704;RPR=70;RUN=1;SAF=70;SAP=155.013;SAR=0;SRF=179;SRP=391.704;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:22,19:22:880:19:742:-54.7596,0,-67.1694 0/1:63:46,17:46:1811:17:645:-39.3999,0,-144.247 0/1:22:20,2:20:793:2:82:-1.15702,0,-65.0641 0/1:52:25,27:25:967:27:1088:-82.5524,0,-71.6782 0/0:43:41,2:41:1644:2:82:0,-5.16461,-140.409 0/1:28:25,3:25:994:3:120:-2.75885,0,-81.3298 dDocent_Contig_10969 27 . C T 71.7419 . AB=0.210526;ABP=16.8392;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=70;DPB=70;DPRA=1.86275;EPP=11.6962;EPPR=146.327;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.939394;PAO=0;PQA=0;PQR=0;PRO=0;QA=156;QR=2627;RO=66;RPL=0;RPP=11.6962;RPPR=146.327;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=66;SRP=146.327;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:8:8,0:8:317:0:0:0,-2.40824,-28.8955 0/0:3:3,0:3:121:0:0:0,-0.90309,-11.28 0/0:6:6,0:6:241:0:0:0,-1.80618,-22.0658 0/0:3:3,0:3:98:0:0:0,-0.90309,-9.13836 0/1:19:15,4:15:593:4:156:-8.69687,0,-47.9872 0/0:31:31,0:31:1257:0:0:0,-9.33193,-113.397 dDocent_Contig_10970 46 . C A 276.952 . AB=0.21875;ABP=46.9826;AC=3;AF=0.25;AN=12;AO=14;CIGAR=1X;DP=96;DPB=96;DPRA=2;EPP=33.4109;EPPR=164.123;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.939024;PAO=0;PQA=0;PQR=0;PRO=0;QA=567;QR=3277;RO=82;RPL=0;RPP=33.4109;RPPR=164.123;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=82;SRP=181.071;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:20,5:20:805:5:201:-10.9443,0,-65.2404 0/1:14:11,3:11:435:3:123:-7.25037,0,-35.2877 0/1:25:19,6:19:754:6:243:-14.7224,0,-60.654 0/0:13:13,0:13:514:0:0:0,-3.91339,-46.6047 0/0:6:6,0:6:241:0:0:0,-1.80618,-22.0658 0/0:13:13,0:13:528:0:0:0,-3.91339,-47.8669 dDocent_Contig_10971 45 . C T 67.122 . AB=0.147059;ABP=39.7976;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=159;DPB=159;DPRA=3.88889;EPP=16.0391;EPPR=335.246;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.901961;PAO=0;PQA=0;PQR=0;PRO=0;QA=242;QR=6150;RO=153;RPL=0;RPP=16.0391;RPPR=335.246;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=153;SRP=335.246;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:845:0:0:0,-6.32163,-76.361 0/0:25:25,0:25:1017:0:0:0,-7.52575,-91.8209 0/0:4:4,0:4:159:0:0:0,-1.20412,-14.692 0/0:4:4,0:4:160:0:0:0,-1.20412,-14.7829 0/0:71:70,1:70:2812:1:41:0,-17.2786,-249.08 0/1:34:29,5:29:1157:5:201:-8.23499,0,-94.1727 dDocent_Contig_10973 20 . T G 1118.65 . AB=0.0714286;ABP=114.686;AC=0;AF=0;AN=12;AO=5;CIGAR=2M1X2M;DP=418;DPB=468.4;DPRA=0.769231;EPP=13.8677;EPPR=760.854;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.997135;PAO=0;PQA=0;PQR=0;PRO=0;QA=200;QR=13803;RO=349;RPL=0;RPP=13.8677;RPPR=760.854;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=349;SRP=760.854;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:36:32,4,0:32:1257:4,0:137,0:-1.82487,0,-102.571,-11.4578,-103.776,-114.886 0|0:77:57,20,0:57:2258:20,0:770,0:-46.436,0,-180.212,-63.5947,-186.232,-249.44 0|0:51:37,14,0:37:1469:14,0:557,0:-35.1201,0,-117.111,-46.2582,-121.325,-167.186 0|0:70:57,8,5:57:2261:8,5:321,200:-9.29114,0,-183.7,-9.97569,-169.634,-194.578 0|0:91:91,0,0:91:3570:0,0:0,0:0,-27.3937,-321.356,-27.3937,-321.356,-321.356 0|0:93:75,17,0:75:2988:17,0:622,0:-28.1943,0,-240.918,-50.7715,-246.036,-296.843 dDocent_Contig_10975 12 . C A 1870.16 . AB=0.412698;ABP=7.18091;AC=5;AF=0.5;AN=10;AO=59;CIGAR=1X;DP=110;DPB=110;DPRA=1.86538;EPP=131.127;EPPR=111.584;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2334;QR=2014;RO=50;RPL=0;RPP=131.127;RPPR=111.584;RPR=59;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=50;SRP=111.584;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:13:10,3:10:409:3:118:-7.08912,0,-33.2572 0/1:27:16,11:16:642:11:417:-29.7462,0,-49.9843 ./.:.:.:.:.:.:.:. 0/0:13:13,0:13:521:0:0:0,-3.91339,-47.2372 1/1:34:0,33:0:0:33:1316:-118.584,-9.93399,0 0/1:23:11,12:11:442:12:483:-36.8975,0,-33.2121 dDocent_Contig_10976 15 . A G 2340.34 . AB=0.179104;ABP=62.9365;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1M6D1X8M;DP=462;DPB=455.625;DPRA=0.51341;EPP=29.068;EPPR=769.54;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.951841;PAO=0;PQA=0;PQR=0;PRO=0;QA=464;QR=13840;RO=353;RPL=0;RPP=29.068;RPPR=769.54;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=353;SRP=769.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:102:101,0,0,1:101:3952:0,0,1:0,0,41:0,-30.404,-355.322,-30.404,-355.322,-355.322,-26.6464,-351.97,-351.97,-351.669 0|0:38:33,0,0,5:33:1312:0,0,5:0,0,202:-7.03001,-16.964,-124.984,-16.964,-124.984,-124.984,0,-108.421,-108.421,-106.916 0|0:52:46,0,0,6:46:1784:0,0,6:0,0,245:-6.77591,-20.6233,-167.169,-20.6233,-167.169,-167.169,0,-146.951,-146.951,-145.145 0|0:159:145,0,0,13:145:5703:0,0,13:0,0,529:0,-43.6493,-512.755,-43.6493,-512.755,-512.755,-0.414875,-469.514,-469.514,-465.6 0|0:44:21,0,0,23:21:825:0,0,23:0,0,919:-69.7667,-76.0884,-143.941,-76.0884,-143.941,-143.941,0,-68.2482,-68.2482,-61.3245 1|0:67:7,12,5,43:7:264:12,5,43:464,183,1738:-157.683,-121.681,-139.699,-144.84,-128.361,-164.966,-16.4871,0,-23.1697,-25.1752 dDocent_Contig_10977 7 . T C 918.139 . AB=0.243094;ABP=106.773;AC=4;AF=0.4;AN=10;AO=44;CIGAR=1X;DP=213;DPB=213;DPRA=1.41406;EPP=98.5551;EPPR=369.989;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1691;QR=6441;RO=169;RPL=0;RPP=98.5551;RPPR=369.989;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=169;SRP=369.989;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:40:30,10:30:1122:10:384:-22.8739,0,-89.2365 0/1:57:47,10:47:1783:10:377:-17.1221,0,-143.565 0/1:53:47,6:47:1800:6:234:-5.47651,0,-146.3 0/1:31:13,18:13:497:18:696:-53.6424,0,-35.7441 ./.:.:.:.:.:.:.:. 0/0:32:32,0:32:1239:0:0:0,-9.63296,-111.803 dDocent_Contig_10978 204 . T A 364.963 . AB=0.405405;ABP=5.88603;AC=1;AF=0.1;AN=10;AO=15;CIGAR=1X;DP=117;DPB=117;DPRA=1.85;EPP=35.5824;EPPR=224.5;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=540;QR=3717;RO=102;RPL=15;RPP=35.5824;RPPR=224.5;RPR=0;RUN=1;SAF=0;SAP=35.5824;SAR=15;SRF=0;SRP=224.5;SRR=102;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:22,15:22:799:15:540:-37.7968,0,-61.0968 0/0:41:41,0:41:1495:0:0:0,-12.3422,-134.841 0/0:26:26,0:26:950:0:0:0,-7.82678,-85.818 0/0:12:12,0:12:436:0:0:0,-3.61236,-39.5826 ./.:.:.:.:.:.:.:. 0/0:1:1,0:1:37:0:0:0,-0.30103,-3.69783 dDocent_Contig_10979 9 . A G 119.269 . AB=0.230769;ABP=19.3799;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=197;DPB=197;DPRA=1.16484;EPP=29.068;EPPR=404.733;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.410811;PAO=0;PQA=0;PQR=0;PRO=0;QA=463;QR=7077;RO=185;RPL=0;RPP=29.068;RPPR=404.733;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=185;SRP=404.733;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:20,6:20:772:6:229:-13.1485,0,-61.982 0/0:42:39,3:39:1494:3:118:0,-1.64037,-123.732 0/0:9:9,0:9:332:0:0:0,-2.70927,-30.2286 0/0:38:35,3:35:1335:3:116:0,-0.621435,-109.617 0/0:36:36,0:36:1375:0:0:0,-10.8371,-124.033 0/0:46:46,0:46:1769:0:0:0,-13.8474,-159.465 dDocent_Contig_10980 98 . N G 66.4848 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=70;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10981 24 . A G 1388.79 . AB=0.311475;ABP=59.5042;AC=6;AF=0.5;AN=12;AO=57;CIGAR=1X;DP=183;DPB=183;DPRA=0;EPP=126.784;EPPR=276.616;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.684211;PAIREDR=0.563492;PAO=0;PQA=0;PQR=0;PRO=0;QA=2256;QR=5027;RO=126;RPL=0;RPP=126.784;RPPR=276.616;RPR=57;RUN=1;SAF=57;SAP=126.784;SAR=0;SRF=126;SRP=276.616;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:26,6:26:1029:6:236:-11.9767,0,-83.27 0/1:41:30,11:30:1213:11:433:-26.9826,0,-97.101 0/1:20:11,9:11:448:9:351:-25.9257,0,-34.6554 0/1:20:16,4:16:637:4:159:-8.67135,0,-51.6433 0/1:32:25,7:25:989:7:279:-15.848,0,-79.6756 0/1:38:18,20:18:711:20:798:-60.6962,0,-52.8743 dDocent_Contig_10982 1 . N G 492.427 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=15;CIGAR=1X;DP=15;DPB=15;DPRA=0;EPP=35.5824;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=524;QR=0;RO=0;RPL=0;RPP=35.5824;RPPR=0;RPR=15;RUN=1;SAF=0;SAP=35.5824;SAR=15;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:107:-9.98217,-0.90309,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:7:0,7:0:0:7:242:-22.1174,-2.10721,0 1/1:4:0,4:0:0:4:140:-12.9449,-1.20412,0 ./.:.:.:.:.:.:.:. dDocent_Contig_10983 98 . N C 309.056 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=10;CIGAR=1X;DP=10;DPB=10;DPRA=0;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=322;QR=0;RO=0;RPL=10;RPP=24.725;RPPR=0;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:5:0,5:0:0:5:151:-13.8881,-1.50515,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:2:0,2:0:0:2:66:-6.26818,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10984 1 . N A 355.849 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=11;CIGAR=1X;DP=11;DPB=11;DPRA=0;EPP=26.8965;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=51.5455;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=371;QR=0;RO=0;RPL=0;RPP=26.8965;RPPR=0;RPR=11;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:70:-6.64481,-0.60206,0 1/1:1:0,1:0:0:1:25:-2.49728,-0.30103,0 1/1:2:0,2:0:0:2:70:-6.59953,-0.60206,0 1/1:4:0,4:0:0:4:139:-12.7818,-1.20412,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:67:-6.3611,-0.60206,0 dDocent_Contig_10985 7 . T A 249.174 . AB=0.289474;ABP=17.6392;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=379;DPB=379;DPRA=0.557185;EPP=26.8965;EPPR=799.941;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8828;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=417;QR=13905;RO=367;RPL=0;RPP=26.8965;RPPR=799.941;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=367;SRP=799.941;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:74:74,0:74:2809:0:0:0,-22.2762,-252.976 0/0:71:70,0:70:2656:0:0:0,-21.0721,-239.065 0/0:92:92,0:92:3508:0:0:0,-27.6948,-315.851 0/0:80:80,0:80:2998:0:0:0,-24.0824,-269.987 0/1:38:27,11:27:1012:11:417:-26.4403,0,-79.9161 0/0:24:24,0:24:922:0:0:0,-7.22472,-83.2886 dDocent_Contig_10986 9 . A G 2551.78 . AB=0.225455;ABP=363.096;AC=4;AF=0.333333;AN=12;AO=130;CIGAR=1X;DP=661;DPB=661;DPRA=0;EPP=285.302;EPPR=1156.06;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.992308;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4957;QR=20290;RO=531;RPL=0;RPP=285.302;RPPR=1156.06;RPR=130;RUN=1;SAF=130;SAP=285.302;SAR=0;SRF=531;SRP=1156.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:80:75,5:75:2881:5:176:0,-7.9006,-243.283 0/0:31:30,1:30:1153:1:39:0,-5.43537,-100.173 0/1:89:71,18:71:2725:18:692:-35.8222,0,-218.643 0/1:86:63,23:63:2407:23:862:-52.0087,0,-190.95 0/1:201:154,47:154:5857:47:1800:-101.745,0,-466.585 0/1:174:138,36:138:5267:36:1388:-72.8234,0,-421.661 dDocent_Contig_10987 10 . G T 57.1716 . AB=0.0977444;ABP=189.937;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=290;DPB=290;DPRA=1.68519;EPP=35.5824;EPPR=600.165;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0;PAIREDR=0.247273;PAO=0;PQA=0;PQR=0;PRO=0;QA=607;QR=10966;RO=275;RPL=0;RPP=35.5824;RPPR=600.165;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=275;SRP=600.165;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:34,0:34:1358:0:0:0,-10.235,-122.48 0/0:49:47,2:47:1878:2:81:0,-7.06474,-161.535 0/0:42:42,0:42:1692:0:0:0,-12.6433,-152.502 0/1:86:77,9:77:3048:9:364:-7.2353,0,-248.517 0/0:32:32,0:32:1284:0:0:0,-9.63296,-115.825 0/1:47:43,4:43:1706:4:162:-0.818336,0,-139.608 dDocent_Contig_10989 26 . C T 133.171 . AB=0.4;ABP=3.44459;AC=6;AF=1;AN=6;AO=2;CIGAR=1X6M21I1X;DP=12;DPB=43.5;DPRA=2.5;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=19;MQMR=0;NS=3;NUMALT=4;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=38;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:5:0,1,0,3,0:0:0:1,0,3,0:40,0,57,0:-4.80976,-3.39942,-3.09839,-4.80976,-3.39942,-4.80976,-1.40592,0,-1.40592,-0.502826,-4.80976,-3.39942,-4.80976,-1.40592,-4.80976 1|1:5:0,0,3,0,2:0:0:0,3,0,2:0,63,0,38:-6.41221,-6.41221,-6.41221,-2.44119,-2.44119,-1.5381,-6.41221,-6.41221,-2.44119,-6.41221,-4.13915,-4.13915,0,-4.13915,-3.53709 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:2:0,2,0,0,0:0:0:2,0,0,0:80,0,0,0:-3.60355,-0.60206,0,-3.60355,-0.60206,-3.60355,-3.60355,-0.60206,-3.60355,-3.60355,-3.60355,-0.60206,-3.60355,-3.60355,-3.60355 dDocent_Contig_10990 8 . C T 594.303 . AB=0.179641;ABP=151.88;AC=6;AF=0.5;AN=12;AO=30;CIGAR=1X1M1X4M1X6M;DP=167;DPB=167.286;DPRA=0;EPP=68.1545;EPPR=250.558;GTI=0;LEN=1;MEANALT=3;MQM=59.7667;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1154;QR=4458;RO=114;RPL=0;RPP=68.1545;RPPR=250.558;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=114;SRP=250.558;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:24:17,0,4,2,0,0:17:669:0,4,2,0,0:0,160,76,0,0:-7.98758,-13.1051,-68.1517,0,-55.0735,-53.8694,-6.87037,-61.9195,-48.8413,-61.3175,-13.1051,-68.1517,-55.0735,-61.9195,-68.1517,-13.1051,-68.1517,-55.0735,-61.9195,-68.1517,-68.1517 0|1:45:33,0,0,8,3,0:33:1301:0,0,8,3,0:0,0,311,104,0:-15.6869,-25.6209,-132.687,-25.6209,-132.687,-132.687,0,-107.129,-107.129,-104.72,-17.6742,-124.735,-124.735,-99.1774,-123.832,-25.6209,-132.687,-132.687,-107.129,-124.735,-132.687 0|1:16:11,0,0,4,0,0:11:433:0,0,4,0,0:0,0,151,0,0:-9.0385,-12.3498,-47.9777,-12.3498,-47.9777,-47.9777,0,-35.6065,-35.6065,-34.4023,-12.3498,-47.9777,-47.9777,-35.6065,-47.9777,-12.3498,-47.9777,-47.9777,-35.6065,-47.9777,-47.9777 0|1:29:18,4,0,3,0,2:18:709:4,0,3,0,2:153,0,117,0,81:-7.13301,0,-57.1259,-12.5516,-58.33,-70.8838,-2.93357,-48.7129,-61.2664,-60.3633,-12.5516,-58.33,-70.8838,-61.2664,-70.8838,-5.86888,-51.6499,-64.2037,-54.5862,-64.2037,-63.6016 0|1:29:20,3,0,4,1,0:20:779:3,0,4,1,0:117,0,152,35,0:-6.44077,-2.83349,-65.9789,-12.4614,-66.882,-76.5004,0,-54.4293,-64.0477,-62.8436,-9.77575,-64.1937,-73.812,-61.3596,-73.5109,-12.4614,-66.882,-76.5004,-64.0477,-73.812,-76.5004 0|1:24:15,0,0,9,0,0:15:567:0,0,9,0,0:0,0,347,0,0:-24.3652,-28.8807,-75.3472,-28.8807,-75.3472,-75.3472,0,-46.8489,-46.8489,-44.1396,-28.8807,-75.3472,-75.3472,-46.8489,-75.3472,-28.8807,-75.3472,-75.3472,-46.8489,-75.3472,-75.3472 dDocent_Contig_10991 46 . A G 86.9865 . AB=0.117647;ABP=110.945;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=355;DPB=355;DPRA=1.63855;EPP=37.7539;EPPR=736.968;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=634;QR=13306;RO=338;RPL=0;RPP=37.7539;RPPR=736.968;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=338;SRP=736.968;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:61:60,1:60:2308:1:41:0,-14.2683,-203.794 0/0:69:67,2:67:2648:2:82:0,-12.9914,-230.668 0/1:85:74,10:74:2942:10:395:-10.2215,0,-239.191 0/0:57:54,3:54:2158:3:116:0,-6.34169,-183.577 0/0:47:47,0:47:1829:0:0:0,-14.1484,-164.83 0/0:36:36,0:36:1421:0:0:0,-10.8371,-128.144 dDocent_Contig_10992 209 . N G 108.276 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=50;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=117;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:117:-10.8271,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_10993 49 . A T 1025.04 . AB=0.318182;ABP=40.9124;AC=4;AF=0.333333;AN=12;AO=46;CIGAR=1X3M1X;DP=266;DPB=266;DPRA=0.59403;EPP=102.898;EPPR=476.391;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.826087;PAIREDR=0.963303;PAO=0;PQA=0;PQR=0;PRO=0;QA=1790;QR=8470;RO=218;RPL=46;RPP=102.898;RPPR=476.391;RPR=0;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=218;SRP=476.391;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:10:6,4:6:227:4:156:-11.4065,0,-17.7801 0|1:49:43,5:43:1684:5:196:-3.43384,0,-137.266 0|1:38:21,17:21:836:17:665:-48.7441,0,-64.1177 0|1:35:19,16:19:726:16:626:-46.1387,0,-55.1285 0|0:67:66,0:66:2558:0:0:0,-19.868,-230.314 0|0:67:63,4:63:2439:4:147:0,-6.58005,-206.101 dDocent_Contig_10994 21 . T G 2450.99 . AB=0.0642202;ABP=182.804;AC=0;AF=0;AN=12;AO=7;CIGAR=2X;DP=426;DPB=426;DPRA=0;EPP=18.2106;EPPR=613.915;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=59.6113;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.933555;PAO=0;PQA=0;PQR=0;PRO=0;QA=270;QR=11345;RO=301;RPL=0;RPP=18.2106;RPPR=656.623;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=296;SRP=613.915;SRR=5;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:50:38,0,12:38:1392:0,12:0,452:-25.9762,-37.4154,-150.782,0,-113.74,-110.128 0|0:101:86,0,14:86:3238:0,14:0,524:-17.1276,-43.0162,-308.331,0,-265.422,-261.207 0|0:50:41,0,7:41:1539:0,7:0,255:-8.46624,-20.8085,-146.875,0,-126.048,-123.941 0|0:63:53,0,9:53:2021:0,9:0,316:-9.74905,-25.7036,-191.517,0,-165.809,-163.1 0|0:109:47,7,55:47:1793:7,55:270,2057:-154.284,-146.259,-291.243,0,-124.911,-130.527 0|0:53:36,0,17:36:1362:0,17:0,626:-40.7178,-51.5549,-162.662,0,-111.478,-106.36 dDocent_Contig_10995 33 . G T 3153.17 . AB=0.045283;ABP=478.94;AC=0;AF=0;AN=12;AO=12;CIGAR=1X1M2I21M4I15M;DP=485;DPB=527.395;DPRA=0;EPP=29.068;EPPR=211.472;GTI=0;LEN=1;MEANALT=15;MQM=60;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=1;PAIREDR=0.96875;PAO=0;PQA=0;PQR=0;PRO=0;QA=459;QR=3657;RO=96;RPL=12;RPP=29.068;RPPR=211.472;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=96;SRP=211.472;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:58:16,2,11,0,0,0,2,5,5,8:16:608:2,11,0,0,0,2,5,5,8:76,397,0,0,0,58,185,189,297:-27.5744,-26.1563,-75.4254,0,-43.6402,-46.5629,-32.3908,-76.0275,-49.8742,-82.2612,-32.3908,-76.0275,-49.8742,-82.2612,-82.2612,-32.3908,-76.0275,-49.8742,-82.2612,-82.2612,-82.2612,-27.7797,-71.4159,-45.2631,-77.6496,-77.6496,-77.6496,-77.0475,-17.2543,-60.8926,-34.739,-67.1265,-67.1265,-67.1265,-62.515,-65.6214,-16.8941,-60.5327,-34.3789,-66.7666,-66.7666,-66.7666,-62.1551,-51.6316,-65.2615,-8.08273,-51.7224,-25.5685,-57.9564,-57.9564,-57.9564,-53.345,-42.8212,-42.4612,-55.5482 0|0:102:16,3,15,11,0,0,1,4,18,19:16:603:3,15,11,0,0,1,4,18,19:115,577,414,0,0,40,156,588,677:-50.3538,-45.7301,-94.24,-7.79874,-47.7734,-52.6981,-21.2462,-61.22,-23.2894,-67.3487,-55.1702,-95.1431,-57.2135,-70.66,-104.583,-55.1702,-95.1431,-57.2135,-70.66,-104.583,-104.583,-51.8746,-91.8475,-53.9178,-67.3644,-101.287,-101.287,-100.986,-42.345,-82.3183,-44.3883,-57.835,-91.7582,-91.7582,-88.4626,-90.5541,-7.70615,-47.6788,-9.7491,-23.1959,-57.1186,-57.1186,-53.823,-44.2939,-51.7001,0,-39.974,-2.04304,-15.4904,-49.4141,-49.4141,-46.1184,-36.589,-1.95126,-43.6945 0|0:105:19,7,27,0,0,0,0,6,9,11:19:728:7,27,0,0,0,0,6,9,11:268,1018,0,0,0,0,217,334,376:-77.7066,-61.4315,-119.076,0,-37.7591,-51.6263,-83.4262,-121.183,-59.7541,-143.177,-83.4262,-121.183,-59.7541,-143.177,-143.177,-83.4262,-121.183,-59.7541,-143.177,-143.177,-143.177,-83.4262,-121.183,-59.7541,-143.177,-143.177,-143.177,-143.177,-65.7169,-103.474,-42.0448,-125.468,-125.468,-125.468,-125.468,-123.662,-56.0976,-93.8546,-32.4253,-115.849,-115.849,-115.849,-115.849,-98.1398,-113.14,-52.9184,-90.675,-29.2465,-112.669,-112.669,-112.669,-112.669,-94.9602,-85.3412,-109.358 0|0:69:19,0,16,1,0,1,7,2,2,5:19:718:0,16,1,0,1,7,2,2,5:0,610,40,0,36,234,71,65,179:-44.3422,-50.0618,-108.926,0,-58.8773,-54.0608,-46.7653,-105.63,-55.5809,-105.329,-50.0618,-108.926,-58.8773,-105.63,-108.926,-47.1238,-105.989,-55.9393,-102.693,-105.989,-105.688,-31.1165,-89.9828,-39.9322,-86.6868,-89.9828,-87.0451,-87.8756,-44.2781,-103.143,-53.0937,-99.8474,-103.143,-100.206,-84.1997,-102.541,-44.8154,-103.68,-53.631,-100.384,-103.68,-100.743,-84.7368,-97.8973,-103.078,-35.4639,-94.3304,-44.2797,-91.0344,-94.3304,-91.3927,-75.3868,-88.5473,-89.0844,-92.8253 0|0:76:18,0,2,5,7,28,1,4,0,0:18:689:0,2,5,7,28,1,4,0,0:0,57,188,267,980,37,146,0,0:-74.3066,-79.7252,-136.276,-75.2042,-131.755,-131.153,-64.3203,-120.873,-116.352,-119.368,-57.8164,-114.37,-109.849,-98.9659,-112.263,0,-56.5583,-52.0383,-41.1541,-34.6502,-48.1294,-76.6977,-133.249,-128.728,-117.846,-111.342,-53.531,-132.948,-67.7968,-124.349,-119.828,-108.945,-102.442,-44.6306,-121.322,-123.145,-79.7252,-136.276,-131.755,-120.873,-114.37,-56.5583,-133.249,-124.349,-136.276,-79.7252,-136.276,-131.755,-120.873,-114.37,-56.5583,-133.249,-124.349,-136.276,-136.276 0|0:75:8,0,16,1,9,13,0,4,0,1:8:311:0,16,1,9,13,0,4,0,1:0,573,32,341,416,0,122,0,25:-52.254,-54.6623,-80.2265,-7.94121,-33.5091,-28.6926,-52.0839,-77.6482,-30.9307,-77.3472,-26.6952,-52.2616,-5.54037,-49.6832,-49.5523,-21.1535,-46.7193,0,-44.1411,-18.7529,-42.8059,-54.6623,-80.2265,-33.5091,-77.6482,-52.2616,-46.7193,-80.2265,-44.892,-70.4565,-23.7388,-67.8783,-42.4913,-36.9497,-70.4565,-69.2524,-54.6623,-80.2265,-33.5091,-77.6482,-52.2616,-46.7193,-80.2265,-70.4565,-80.2265,-52.7145,-78.2787,-31.5614,-75.7004,-50.3138,-44.7717,-78.2787,-68.5088,-78.2787,-77.9777 dDocent_Contig_10996 14 . T A 173.964 . AB=0.304348;ABP=10.6577;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=164;DPB=164;DPRA=0.815603;EPP=18.2106;EPPR=343.931;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=0.428571;PAIREDR=0.433121;PAO=0;PQA=0;PQR=0;PRO=0;QA=283;QR=6267;RO=157;RPL=0;RPP=18.2106;RPPR=343.931;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=157;SRP=343.931;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:773:0:0:0,-6.0206,-69.8757 0/0:34:34,0:34:1366:0:0:0,-10.235,-123.2 0/0:28:28,0:28:1122:0:0:0,-8.42884,-101.265 0/0:25:25,0:25:1017:0:0:0,-7.52575,-91.8215 0/0:34:34,0:34:1350:0:0:0,-10.235,-121.759 0/1:23:16,7:16:639:7:283:-18.9193,0,-50.921 dDocent_Contig_10997 69 . T A 60.6943 . AB=0.1125;ABP=107.35;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=316;DPB=316;DPRA=2.05128;EPP=35.5824;EPPR=656.623;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.8;PAIREDR=0.72093;PAO=0;PQA=0;PQR=0;PRO=0;QA=552;QR=11558;RO=301;RPL=8;RPP=3.15506;RPPR=17.619;RPR=7;RUN=1;SAF=8;SAP=3.15506;SAR=7;SRF=128;SRP=17.619;SRR=173;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:48,0:48:1810:0:0:0,-14.4494,-163.127 0/1:80:71,9:71:2716:9:348:-7.5923,0,-220.511 0/0:21:21,0:21:769:0:0:0,-6.32163,-69.5103 0/0:48:48,0:48:1870:0:0:0,-14.4494,-168.521 0/0:39:39,0:39:1516:0:0:0,-11.7402,-136.7 0/0:80:74,6:74:2877:6:204:0,-5.40041,-240.377 dDocent_Contig_10998 66 . G A 541.097 . AB=0.230159;ABP=82.6999;AC=3;AF=0.25;AN=12;AO=30;CIGAR=1X;DP=217;DPB=217;DPRA=1.19531;EPP=68.1545;EPPR=409.076;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.3583;NS=6;NUMALT=1;ODDS=0;PAIRED=0.566667;PAIREDR=0.68984;PAO=0;PQA=0;PQR=0;PRO=0;QA=1108;QR=6620;RO=187;RPL=30;RPP=68.1545;RPPR=409.076;RPR=0;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=187;SRP=409.076;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:22,13:22:771:13:466:-31.7418,0,-55.4597 0/0:36:36,0:36:1299:0:0:0,-10.8371,-117.208 0/0:27:26,1:26:929:1:39:0,-4.23125,-78.2175 0/1:52:44,8:44:1522:8:299:-11.6107,0,-121.605 0/0:28:28,0:28:985:0:0:0,-8.42884,-88.9549 0/1:39:31,8:31:1114:8:304:-15.979,0,-88.826 dDocent_Contig_10999 28 . C T 270.659 . AB=0.171717;ABP=95.6817;AC=4;AF=0.333333;AN=12;AO=17;CIGAR=1X2M1X;DP=152;DPB=152;DPRA=0.933962;EPP=39.9253;EPPR=291.816;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.941176;PAIREDR=0.947368;PAO=0;PQA=0;PQR=0;PRO=0;QA=677;QR=5219;RO=133;RPL=0;RPP=39.9253;RPPR=291.816;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=133;SRP=291.816;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:23:17,6:17:657:6:243:-15.3245,0,-52.5382 0|1:28:24,4:24:948:4:162:-6.53812,0,-77.1946 0|1:24:19,5:19:736:5:192:-10.423,0,-59.3428 0|1:24:21,2:21:836:2:80:-0.474911,0,-68.5293 0|0:19:18,0:18:708:0:0:0,-5.41854,-63.6507 0|0:34:34,0:34:1334:0:0:0,-10.235,-120.326 dDocent_Contig_11000 16 . A T 103.781 . AB=0.157303;ABP=93.7974;AC=2;AF=0.166667;AN=12;AO=26;CIGAR=1X1M2X;DP=236;DPB=235.75;DPRA=0;EPP=59.4686;EPPR=435.133;GTI=0;LEN=1;MEANALT=1.66667;MQM=26.5769;MQMR=54.0251;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.447236;PAO=0;PQA=0;PQR=0;PRO=0;QA=1035;QR=7836;RO=199;RPL=0;RPP=59.4686;RPPR=435.133;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=199;SRP=435.133;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:43:39,3,1:39:1535:3,1:119,41:0,-6.87321,-126.003,-9.8827,-125.059,-129.632 0|0:66:62,4,0:62:2444:4,0:161,0:0,-8.51627,-199.285,-18.6639,-200.489,-210.326 0|1:36:32,4,0:32:1265:4,0:162,0:-1.10867,0,-103.213,-10.7416,-104.417,-114.828 0|0:38:33,5,0:33:1286:5,0:195,0:0,-4.08898,-99.4591,-9.93399,-100.964,-106.623 0|0:22:12,4,5:12:478:4,5:161,193:-4.89008,-1.03284,-14.0632,0,-6.73614,-12.7142 0|1:31:21,6,4:21:828:6,4:237,160:-8.69401,0,-55.5524,-8.18536,-50.5116,-64.2656 dDocent_Contig_11001 32 . G A 2057.53 . AB=0.436047;ABP=9.12072;AC=6;AF=0.5;AN=12;AO=75;CIGAR=1X;DP=172;DPB=172;DPRA=0;EPP=165.871;EPPR=213.643;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.659794;PAO=0;PQA=0;PQR=0;PRO=0;QA=2963;QR=3841;RO=97;RPL=0;RPP=165.871;RPPR=213.643;RPR=75;RUN=1;SAF=75;SAP=165.871;SAR=0;SRF=97;SRP=213.643;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:17,20:17:676:20:781:-59.4733,0,-50.0293 0/1:30:15,15:15:600:15:601:-45.3965,0,-45.3068 0/1:25:14,11:14:554:11:442:-32.6098,0,-42.6686 0/1:30:14,16:14:551:16:634:-48.3653,0,-40.8992 0/1:30:26,4:26:1018:4:159:-5.65993,0,-82.8831 0/1:20:11,9:11:442:9:346:-25.47,0,-34.1149 dDocent_Contig_11002 9 . A G 5136.13 . AB=0.0661765;ABP=225.331;AC=0;AF=0;AN=12;AO=9;CIGAR=1M2D2M1X3M1X;DP=408;DPB=355.8;DPRA=0;EPP=22.5536;EPPR=235.358;GTI=0;LEN=1;MEANALT=7;MQM=47.7778;MQMR=60;NS=6;NUMALT=5;ODDS=1.11022e-16;PAIRED=0.444444;PAIREDR=1;PAO=0;PQA=0;PQR=16.75;PRO=0.5;QA=320;QR=4092;RO=107;RPL=0;RPP=22.5536;RPPR=235.358;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=107;SRP=235.358;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:72:25,7,1,9,8,20:25:962:7,1,9,8,20:257,37,327,294,735:-52.2707,-39.5083,-116.394,-56.7826,-115.487,-135.474,-33.131,-91.8374,-109.111,-109.415,-35.7584,-94.4648,-111.739,-88.0882,-112.344,0,-58.7102,-75.9833,-52.3336,-54.9608,-72.9764 0|0:64:6,2,2,10,6,36:6:234:2,2,10,6,36:63,72,350,221,1308:-113.372,-110.446,-129.082,-109.303,-123.81,-127.94,-87.041,-101.548,-100.405,-103.269,-97.1046,-111.611,-110.468,-88.2064,-114.537,-8.88794,-23.4013,-22.2559,0,-10.0566,-17.2933 0|0:45:10,0,4,4,2,23:10:389:0,4,4,2,23:0,141,145,74,838:-65.4462,-68.4565,-100.434,-57.2604,-89.238,-88.0339,-56.6268,-88.605,-77.4096,-87.4009,-62.4015,-94.3792,-83.1836,-82.5506,-93.7772,0,-31.9943,-20.8002,-20.165,-25.9392,-25.0706 0|0:67:15,0,6,11,1,34:15:571:0,6,11,1,34:0,204,405,37,1245:-97.0601,-101.576,-148.416,-85.5723,-132.412,-130.606,-68.5923,-115.434,-99.4304,-112.122,-98.5484,-145.389,-129.385,-112.406,-145.088,0,-46.8476,-30.8483,-13.8655,-43.8205,-36.6126 0|0:94:40,0,8,0,8,35:40:1510:0,8,0,8,35:0,290,0,292,1261:-89.2693,-101.311,-225.081,-77.9697,-201.741,-199.333,-101.311,-225.081,-201.741,-225.081,-77.4508,-201.223,-177.883,-201.223,-198.815,0,-123.779,-100.441,-123.779,-99.9223,-113.243 0|0:66:11,0,4,2,11,37:11:426:0,4,2,11,37:0,148,74,407,1358:-107.416,-110.727,-145.726,-98.6453,-133.645,-132.441,-104.699,-139.699,-127.618,-139.097,-77.4291,-112.429,-100.348,-106.402,-109.118,0,-35.0024,-22.9222,-28.9756,-1.7095,-23.8643 dDocent_Contig_11003 30 . C G 53.2692 . AB=0.131579;ABP=47.8112;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=151;DPB=151;DPRA=1.68142;EPP=13.8677;EPPR=320.045;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.4;PAIREDR=0.863014;PAO=0;PQA=0;PQR=0;PRO=0;QA=199;QR=5768;RO=146;RPL=0;RPP=13.8677;RPPR=320.045;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=146;SRP=320.045;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:839:0:0:0,-6.32163,-75.8232 0/0:15:15,0:15:607:0:0:0,-4.51545,-54.9684 0/1:38:33,5:33:1310:5:199:-6.8498,0,-106.734 0/0:40:40,0:40:1579:0:0:0,-12.0412,-142.359 0/0:23:23,0:23:882:0:0:0,-6.92369,-79.6918 0/0:14:14,0:14:551:0:0:0,-4.21442,-49.9297 dDocent_Contig_11004 109 . T A 421.389 . AB=0.26087;ABP=48.7056;AC=4;AF=0.333333;AN=12;AO=24;CIGAR=1X;DP=160;DPB=160;DPRA=0.676471;EPP=55.1256;EPPR=298.331;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.911765;PAO=0;PQA=0;PQR=0;PRO=0;QA=841;QR=4579;RO=136;RPL=0;RPP=55.1256;RPPR=298.331;RPR=24;RUN=1;SAF=0;SAP=55.1256;SAR=24;SRF=0;SRP=298.331;SRR=136;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:20,6:20:686:6:198:-10.3165,0,-54.2342 0/1:8:3,5:3:99:5:173:-13.5016,0,-6.82888 0/0:66:66,0:66:2229:0:0:0,-19.868,-200.876 0/1:43:34,9:34:1137:9:325:-16.6522,0,-89.6827 0/1:15:11,4:11:361:4:145:-8.89026,0,-28.2925 0/0:2:2,0:2:67:0:0:0,-0.60206,-6.36304 dDocent_Contig_11007 7 . T A 1347.32 . AB=0.520833;ABP=3.37221;AC=4;AF=0.333333;AN=12;AO=50;CIGAR=1X2M;DP=101;DPB=101;DPRA=9.6;EPP=111.584;EPPR=98.736;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.98;PAIREDR=0.916667;PAO=0;PQA=0;PQR=0;PRO=0;QA=1881;QR=1821;RO=48;RPL=0;RPP=111.584;RPPR=107.241;RPR=50;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=47;SRP=98.736;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:24:15,0,9:15:570:0,9:0,336:-23.3667,-27.8822,-74.6327,0,-47.1261,-44.4168 0|1:37:11,2,24:11:416:2,24:65,899:-70.3554,-68.4259,-101.927,0,-28.91,-26.9218 0|1:15:7,0,7:7:266:0,7:0,264:-19.5165,-21.6237,-43.4388,0,-21.8058,-19.6986 0|1:20:10,0,10:10:379:0,10:0,382:-28.7143,-31.7246,-62.7981,0,-31.4537,-28.4434 0|0:1:1,0,0:1:36:0,0:0,0:0,-0.30103,-3.59827,-0.30103,-3.59827,-3.59827 0|0:4:4,0,0:4:154:0,0:0,0:0,-1.20412,-14.2336,-1.20412,-14.2336,-14.2336 dDocent_Contig_11008 9 . A G 68.7381 . AB=0.2;ABP=18.6449;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=112;DPB=112;DPRA=1.08696;EPP=11.6962;EPPR=237.529;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0.675926;PAO=0;PQA=0;PQR=0;PRO=0;QA=156;QR=4058;RO=108;RPL=0;RPP=11.6962;RPPR=237.529;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=108;SRP=237.529;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:633:0:0:0,-5.11751,-57.3013 0/0:16:16,0:16:581:0:0:0,-4.81648,-52.6149 0/0:29:29,0:29:1102:0:0:0,-8.72987,-99.4824 0/1:20:16,4:16:621:4:156:-8.39669,0,-50.2096 0/0:10:10,0:10:341:0:0:0,-3.0103,-31.0124 0/0:20:20,0:20:780:0:0:0,-6.0206,-70.5278 dDocent_Contig_11010 5 . G T 1226.94 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=42;CIGAR=1X;DP=42;DPB=42;DPRA=0;EPP=94.2121;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=34.0238;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1544;QR=0;RO=0;RPL=0;RPP=94.2121;RPPR=0;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:111:-8.83266,-0.90309,0 1/1:8:0,8:0:0:8:292:-21.2456,-2.40824,0 1/1:8:0,8:0:0:8:296:-23.028,-2.40824,0 1/1:11:0,11:0:0:11:407:-31.5452,-3.31133,0 1/1:7:0,7:0:0:7:255:-21.2774,-2.10721,0 1/1:5:0,5:0:0:5:183:-15.9867,-1.50515,0 dDocent_Contig_11011 52 . G T 3689.11 . AB=0.166667;ABP=26.1727;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X1M1X;DP=670;DPB=670;DPRA=0.226415;EPP=11.6962;EPPR=1073.55;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.957404;PAO=0;PQA=0;PQR=0;PRO=0;QA=148;QR=19018;RO=493;RPL=4;RPP=11.6962;RPPR=1073.55;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=493;SRP=1073.55;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:110:105,0,0,3:105:4045:0,0,3:0,0,120:0,-31.6081,-363.754,-31.6081,-363.754,-363.754,-21.606,-353.869,-353.869,-352.966 0|0:95:75,0,14,5:75:2845:0,14,5:0,570,198:-24.4803,-47.0575,-280.279,0,-233.254,-229.04,-30.7599,-263.982,-216.957,-262.477 0|0:102:98,0,1,2:98:3826:0,1,2:0,38,80:0,-29.5009,-344.023,-26.3786,-340.906,-340.605,-22.8736,-337.432,-334.316,-336.83 0|1:24:17,4,2,0:17:667:4,2,0:148,73,0:-6.99584,0,-53.6846,-6.14919,-48.9278,-60.4262,-12.1134,-54.8887,-61.0282,-66.9898 0|0:72:43,0,20,9:43:1676:0,20,9:0,804,364:-53.3101,-66.2544,-203.995,0,-137.736,-131.715,-36.2425,-173.982,-107.722,-171.273 0|0:267:155,0,104,6:155:5959:0,104,6:0,4108,237:-291.346,-338.006,-827.142,0,-489.138,-457.831,-318.505,-807.641,-469.636,-805.835 dDocent_Contig_11012 18 . T G 847.377 . AB=0.372093;ABP=9.12072;AC=7;AF=0.583333;AN=12;AO=29;CIGAR=1X;DP=65;DPB=65;DPRA=1.24444;EPP=65.983;EPPR=81.1833;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1123;QR=1420;RO=36;RPL=0;RPP=65.983;RPPR=81.1833;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=36;SRP=81.1833;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:345:0:0:0,-2.70927,-31.403 0/1:12:5,7:5:204:7:256:-19.7732,0,-15.1317 0/1:20:14,6:14:554:6:239:-15.8638,0,-44.1818 0/1:11:8,3:8:317:3:122:-8.06116,0,-25.5816 1/1:4:0,4:0:0:4:149:-13.7715,-1.20412,0 1/1:9:0,9:0:0:9:357:-32.4898,-2.70927,0 dDocent_Contig_11013 50 . G A 103.462 . AB=0;ABP=0;AC=2;AF=0.2;AN=10;AO=3;CIGAR=1X2M4D1M;DP=89;DPB=86;DPRA=0.301887;EPP=9.52472;EPPR=183.243;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=119;QR=3170;RO=83;RPL=3;RPP=9.52472;RPPR=183.243;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=83;SRP=183.243;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:14:13,1,0:13:494:1,0:39,0:0,-0.317855,-40.9072,-3.91339,-41.2082,-44.4148 0|0:23:23,0,0:23:884:0,0:0,0:0,-6.92369,-79.8775,-6.92369,-79.8775,-79.8775 0|0:30:30,0,0:30:1142:0,0:0,0:0,-9.0309,-103.077,-9.0309,-103.077,-103.077 0|0:20:17,0,3:17:650:0,3:0,108:-4.05402,-9.17153,-62.525,0,-53.7167,-52.8136 .:.:.:.:.:.:.:. 1|1:2:0,2,0:0:0:2,0:80,0:-7.59157,-0.60206,0,-7.59157,-0.60206,-7.59157 dDocent_Contig_11014 11 . T A 38.6134 . AB=0.666667;ABP=3.73412;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=1X;DP=18;DPB=18;DPRA=1;EPP=7.35324;EPPR=37.7539;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=57.4375;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=66;QR=529;RO=16;RPL=0;RPP=7.35324;RPPR=37.7539;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=37.7539;SRR=16;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:3:3,0:3:105:0:0:0,-0.90309,-9.79616 0/1:3:1,2:1:35:2:66:-5.36509,0,-2.58614 0/0:1:1,0:1:36:0:0:0,-0.30103,-3.59827 0/0:2:2,0:2:70:0:0:0,-0.60206,-6.6474 0/0:5:5,0:5:171:0:0:0,-1.50515,-15.7176 0/0:4:4,0:4:112:0:0:0,-1.20412,-10.3524 dDocent_Contig_11016 17 . G T 43.5669 . AB=0.333333;ABP=4.45795;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=1X;DP=102;DPB=102;DPRA=0.3125;EPP=7.35324;EPPR=220.158;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=8.67362e-19;PAIRED=1;PAIREDR=0.6;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=3965;RO=100;RPL=0;RPP=7.35324;RPPR=220.158;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=100;SRP=220.158;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:786:0:0:0,-6.0206,-71.0537 0/0:22:22,0:22:884:0:0:0,-6.62266,-79.8676 0/0:11:11,0:11:446:0:0:0,-3.31133,-40.4954 0/0:24:24,0:24:951:0:0:0,-7.22472,-85.8903 0/1:6:4,2:4:163:2:81:-5.87955,0,-13.2522 0/0:19:19,0:19:735:0:0:0,-5.71957,-66.4583 dDocent_Contig_11017 109 . C T 179.82 . AB=0.2;ABP=22.5536;AC=4;AF=0.333333;AN=12;AO=10;CIGAR=1X;DP=79;DPB=79;DPRA=0.910714;EPP=24.725;EPPR=152.842;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.985507;PAO=0;PQA=0;PQR=0;PRO=0;QA=333;QR=2316;RO=69;RPL=0;RPP=24.725;RPPR=152.842;RPR=10;RUN=1;SAF=0;SAP=24.725;SAR=10;SRF=0;SRP=152.842;SRR=69;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:15:11,4:11:367:4:138:-7.15448,0,-28.8378 0/0:22:21,1:21:715:1:32:0,-3.45584,-61.5 0/0:27:27,0:27:905:0:0:0,-8.12781,-81.7567 0/1:10:9,1:9:296:1:31:-0.0631483,0,-23.9499 0/0:1:1,0:1:33:0:0:0,-0.30103,-3.29913 1/1:4:0,4:0:0:4:132:-12.0481,-1.20412,0 dDocent_Contig_11018 13 . G T 30.1295 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=56;DPB=56;DPRA=2.73333;EPP=35.5824;EPPR=92.0407;GTI=0;LEN=1;MEANALT=1;MQM=7;MQMR=7;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=579;QR=1634;RO=41;RPL=0;RPP=35.5824;RPPR=92.0407;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=41;SRP=92.0407;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:3:3,0:3:118:0:0:0,-0.90309,-1.95933 0/0:16:15,1:15:604:1:35:0,-4.11703,-8.81827 0/0:3:3,0:3:113:0:0:0,-0.90309,-1.95845 0/0:9:9,0:9:349:0:0:0,-2.70927,-5.73757 0/0:9:5,4:5:205:4:148:0,-0.121183,-0.631276 1/1:16:6,10:6:245:10:396:-2.51651,-0.967274,0 dDocent_Contig_11020 109 . C T 46.0473 . AB=0.139535;ABP=51.5402;AC=1;AF=0.1;AN=10;AO=8;CIGAR=1X;DP=163;DPB=163;DPRA=1.21667;EPP=20.3821;EPPR=339.589;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.774194;PAO=0;PQA=0;PQR=0;PRO=0;QA=279;QR=5322;RO=155;RPL=0;RPP=20.3821;RPPR=339.589;RPR=8;RUN=1;SAF=0;SAP=20.3821;SAR=8;SRF=0;SRP=339.589;SRR=155;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:28,2:28:956:2:70:0,-2.3835,-79.7023 0/1:43:37,6:37:1265:6:209:-6.20676,0,-101.207 0/0:44:44,0:44:1519:0:0:0,-13.2453,-137.005 0/0:40:40,0:40:1376:0:0:0,-12.0412,-124.139 ./.:.:.:.:.:.:.:. 0/0:6:6,0:6:206:0:0:0,-1.80618,-18.8766 dDocent_Contig_11021 15 . C T 663.671 . AB=0.0555556;ABP=95.6598;AC=0;AF=0;AN=12;AO=3;CIGAR=1X3M1X;DP=243;DPB=243;DPRA=1.21348;EPP=9.52472;EPPR=441.648;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.920792;PAO=0;PQA=0;PQR=0;PRO=0;QA=119;QR=8016;RO=202;RPL=0;RPP=9.52472;RPPR=441.648;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=202;SRP=441.648;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:29:29,0,0:29:1135:0,0:0,0:0,-8.72987,-102.437,-8.72987,-102.437,-102.437 0|0:60:56,0,2:56:2228:0,2:0,77:0,-16.8577,-200.366,-10.4688,-194.045,-193.443 0|0:54:46,3,5:46:1826:3,5:119,202:-2.81036,-6.86441,-156.265,0,-140.514,-148.805 0|0:52:40,0,11:40:1596:0,11:0,443:-24.4639,-36.5051,-167.939,0,-131.427,-128.115 0|0:22:16,0,6:16:632:0,6:0,239:-15.2621,-20.0786,-72.0797,0,-52.398,-50.5919 0|0:26:15,0,11:15:599:0,11:0,428:-31.0414,-35.5569,-84.8952,0,-49.7313,-46.42 dDocent_Contig_11022 21 . T A 34.097 . AB=0.285714;ABP=5.80219;AC=1;AF=0.1;AN=10;AO=2;CIGAR=1X;DP=124;DPB=124;DPRA=0.239316;EPP=7.35324;EPPR=267.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=75;QR=4844;RO=122;RPL=0;RPP=7.35324;RPPR=267.93;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=122;SRP=267.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:853:0:0:0,-6.62266,-77.0692 0/0:17:17,0:17:680:0:0:0,-5.11751,-61.5283 0/0:51:51,0:51:2026:0:0:0,-15.3525,-182.527 0/0:27:27,0:27:1089:0:0:0,-8.12781,-98.2893 ./.:.:.:.:.:.:.:. 0/1:7:5,2:5:196:2:75:-5.01159,0,-15.9067 dDocent_Contig_11023 9 . A G 7133.4 . AB=0.584559;ABP=19.9031;AC=8;AF=0.666667;AN=12;AO=235;CIGAR=1X;DP=350;DPB=350;DPRA=0;EPP=513.306;EPPR=252.73;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.995745;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8980;QR=4408;RO=115;RPL=0;RPP=513.306;RPPR=252.73;RPR=235;RUN=1;SAF=235;SAP=513.306;SAR=0;SRF=115;SRP=252.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:103:23,80:23:889:80:3063:-244.823,0,-49.3239 0/1:62:14,48:14:541:48:1815:-144.936,0,-30.3714 0/1:30:25,5:25:946:5:191:-8.52776,0,-76.4217 0/1:77:51,26:51:1954:26:1006:-67.6712,0,-152.922 1/1:17:0,17:0:0:17:656:-59.3766,-5.11751,0 1/1:61:2,59:2:78:59:2249:-195.227,-10.9594,0 dDocent_Contig_11024 117 . T A 122.326 . AB=0.208333;ABP=38.4777;AC=1;AF=0.125;AN=8;AO=10;CIGAR=1X;DP=161;DPB=161;DPRA=1.27434;EPP=24.725;EPPR=328.731;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993333;PAO=0;PQA=0;PQR=0;PRO=0;QA=312;QR=5079;RO=150;RPL=0;RPP=24.725;RPPR=328.731;RPR=10;RUN=1;SAF=0;SAP=24.725;SAR=10;SRF=0;SRP=328.731;SRR=150;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:825:0:0:0,-7.22472,-74.5666 0/0:42:42,0:42:1445:0:0:0,-12.6433,-130.347 0/1:48:38,10:38:1260:10:312:-13.9316,0,-99.2424 0/0:47:46,0:46:1549:0:0:0,-13.8474,-139.348 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11025 29 . A G 84.6704 . AB=0.166667;ABP=20.3821;AC=4;AF=0.333333;AN=12;AO=4;CIGAR=1X;DP=63;DPB=63;DPRA=0.431818;EPP=11.6962;EPPR=131.127;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=159;QR=2306;RO=59;RPL=0;RPP=11.6962;RPPR=131.127;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=59;SRP=131.127;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:8:8,0:8:314:0:0:0,-2.40824,-28.6237 0/1:6:4,2:4:153:2:79:-5.69106,0,-12.3329 0/0:30:30,0:30:1175:0:0:0,-9.0309,-106.02 0/0:6:6,0:6:241:0:0:0,-1.80618,-22.0663 0/1:12:11,1:11:423:1:40:-0.383319,0,-34.8069 1/1:1:0,1:0:0:1:40:-3.99568,-0.30103,0 dDocent_Contig_11026 23 . C T 1356.44 . AB=0.303371;ABP=62.7868;AC=6;AF=0.5;AN=12;AO=54;CIGAR=1X3M;DP=178;DPB=178;DPRA=0;EPP=120.27;EPPR=220.241;GTI=0;LEN=1;MEANALT=2;MQM=59.7407;MQMR=59.5962;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.903846;PAO=0;PQA=0;PQR=0;PRO=0;QA=2163;QR=4109;RO=104;RPL=0;RPP=120.27;RPPR=228.843;RPR=54;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=103;SRP=220.241;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:26:21,1,4:21:832:1,4:40,153:-6.2152,-9.23825,-76.9542,0,-64.7062,-66.7975 0|1:31:13,3,15:13:512:3,15:122,598:-45.3229,-39.1717,-80.3817,0,-32.0394,-37.5895 0|1:9:4,1,4:4:158:1,4:41,163:-12.2412,-10.0608,-22.7548,0,-9.60232,-11.7852 0|1:22:12,3,7:12:469:3,7:120,285:-19.897,-13.7954,-51.4375,0,-28.8345,-36.4457 0|1:49:30,7,12:30:1193:7,12:265,475:-30.0725,-17.5385,-113.656,0,-76.6732,-94.6288 0|1:41:24,5,12:24:945:5,12:185,489:-33.1175,-25.2248,-101.445,0,-62.6302,-74.142 dDocent_Contig_11027 13 . T A 163.517 . AB=0.545455;ABP=3.20771;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=111;DPB=111;DPRA=0.55;EPP=16.0391;EPPR=228.843;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.932692;PAO=0;PQA=0;PQR=0;PRO=0;QA=228;QR=4069;RO=104;RPL=0;RPP=16.0391;RPPR=228.843;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=104;SRP=228.843;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:11:5,6:5:198:6:228:-17.5735,0,-14.8857 0/0:25:24,0:24:914:0:0:0,-7.22472,-82.173 0/0:18:18,0:18:716:0:0:0,-5.41854,-64.7654 0/0:14:14,0:14:551:0:0:0,-4.21442,-49.9348 0/0:8:8,0:8:318:0:0:0,-2.40824,-28.987 0/0:35:35,0:35:1372:0:0:0,-10.536,-123.745 dDocent_Contig_11029 9 . A T 719.236 . AB=0.349398;ABP=19.3617;AC=2;AF=0.166667;AN=12;AO=29;CIGAR=1X;DP=295;DPB=295;DPRA=0.783019;EPP=65.983;EPPR=580.622;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.241379;PAIREDR=0.360902;PAO=0;PQA=0;PQR=0;PRO=0;QA=1105;QR=10162;RO=266;RPL=0;RPP=65.983;RPPR=580.622;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=266;SRP=580.622;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1348:0:0:0,-10.536,-121.606 0/0:59:59,0:59:2240:0:0:0,-17.7608,-201.82 0/0:40:40,0:40:1541:0:0:0,-12.0412,-138.961 0/0:78:78,0:78:2964:0:0:0,-23.4803,-266.935 0/1:39:26,13:26:990:13:492:-32.8826,0,-77.6704 0/1:44:28,16:28:1079:16:613:-42.2628,0,-84.1703 dDocent_Contig_11030 153 . T A 763.316 . AB=0.326316;ABP=27.9022;AC=3;AF=0.3;AN=10;AO=31;CIGAR=1X;DP=113;DPB=113;DPRA=3.51852;EPP=70.3259;EPPR=181.071;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1213;QR=3165;RO=82;RPL=0;RPP=70.3259;RPPR=181.071;RPR=31;RUN=1;SAF=0;SAP=70.3259;SAR=31;SRF=0;SRP=181.071;SRR=82;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:667:0:0:0,-5.11751,-60.3641 0/1:24:7,17:7:265:17:672:-53.5892,0,-16.9814 0/1:44:37,7:37:1420:7:262:-10.6897,0,-114.82 0/1:27:20,7:20:773:7:279:-17.3533,0,-61.7673 ./.:.:.:.:.:.:.:. 0/0:1:1,0:1:40:0:0:0,-0.30103,-3.99568 dDocent_Contig_11031 7 . T A 313.553 . AB=0.15942;ABP=142.047;AC=2;AF=0.166667;AN=12;AO=27;CIGAR=1X;DP=380;DPB=380;DPRA=1.13793;EPP=61.6401;EPPR=769.54;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.592593;PAIREDR=0.696884;PAO=0;PQA=0;PQR=0;PRO=0;QA=1028;QR=13401;RO=353;RPL=0;RPP=61.6401;RPPR=769.54;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=353;SRP=769.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:37,3:37:1404:3:112:0,-1.5949,-116.195 0/1:81:67,14:67:2542:14:536:-24.2001,0,-204.598 0/0:86:84,2:84:3198:2:78:0,-18.4851,-280.57 0/1:57:49,8:49:1874:8:302:-10.3771,0,-151.75 0/0:54:54,0:54:2055:0:0:0,-16.2556,-185.183 0/0:62:62,0:62:2328:0:0:0,-18.6639,-209.735 dDocent_Contig_11032 45 . G A 484.208 . AB=0.459459;ABP=3.5385;AC=1;AF=0.125;AN=8;AO=18;CIGAR=1X;DP=119;DPB=119;DPRA=2.96667;EPP=42.0968;EPPR=222.329;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=0.944444;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=696;QR=4022;RO=101;RPL=0;RPP=42.0968;RPPR=222.329;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=101;SRP=222.329;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:52:51,1:51:2018:1:19:0,-13.7536,-179.913 0/0:11:11,0:11:447:0:0:0,-3.31133,-40.5855 0/0:19:19,0:19:751:0:0:0,-5.71957,-67.9071 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 0/1:37:20,17:20:806:17:677:-50.1197,0,-61.7179 dDocent_Contig_11033 19 . C T 598.517 . AB=0.318182;ABP=21.9613;AC=5;AF=0.5;AN=10;AO=23;CIGAR=1X;DP=76;DPB=76;DPRA=2.125;EPP=52.9542;EPPR=118.098;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=928;QR=2094;RO=53;RPL=0;RPP=52.9542;RPPR=118.098;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=53;SRP=118.098;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:8:8,0:8:323:0:0:0,-2.40824,-29.4386 0/1:10:8,2:8:324:2:82:-4.76938,0,-26.5189 0/1:34:29,5:29:1155:5:196:-7.77636,0,-93.9973 0/1:22:8,14:8:292:14:571:-45.109,0,-19.9921 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:79:-7.49763,-0.60206,0 dDocent_Contig_11034 8 . C T 40.5913 . AB=0.121951;ABP=53.9075;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=216;DPB=216;DPRA=1.17143;EPP=13.8677;EPPR=461.191;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8483;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.92891;PAO=0;PQA=0;PQR=0;PRO=0;QA=195;QR=8088;RO=211;RPL=0;RPP=13.8677;RPPR=461.191;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=211;SRP=461.191;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:8:8,0:8:304:0:0:0,-2.40824,-27.7194 0/0:30:30,0:30:1165:0:0:0,-9.0309,-105.148 0/0:47:47,0:47:1801:0:0:0,-14.1484,-162.344 0/0:45:45,0:45:1706:0:0:0,-13.5463,-153.799 0/1:41:36,5:36:1363:5:195:-5.58197,0,-110.605 0/0:45:45,0:45:1749:0:0:0,-13.5463,-157.627 dDocent_Contig_11035 25 . C G 779.214 . AB=0.345238;ABP=20.4855;AC=2;AF=0.166667;AN=12;AO=29;CIGAR=1X;DP=925;DPB=925;DPRA=0.199762;EPP=65.983;EPPR=1948.65;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9911;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1175;QR=36139;RO=896;RPL=0;RPP=65.983;RPPR=1948.65;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=896;SRP=1948.65;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:49:39,10:39:1568:10:405:-22.0596,0,-126.603 0/0:34:34,0:34:1377:0:0:0,-10.235,-124.184 0/1:35:16,19:16:647:19:770:-59.0837,0,-48.0265 0/0:200:200,0:200:8054:0:0:0,-60.206,-724.387 0/0:230:230,0:230:9279:0:0:0,-69.2369,-834.496 0/0:377:377,0:377:15214:0:0:0,-113.488,-1367.98 dDocent_Contig_11036 47 . C T 95.938 . AB=0.363636;ABP=4.78696;AC=1;AF=0.1;AN=10;AO=4;CIGAR=1X;DP=58;DPB=58;DPRA=0.93617;EPP=11.6962;EPPR=120.27;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.814815;PAO=0;PQA=0;PQR=0;PRO=0;QA=157;QR=2167;RO=54;RPL=0;RPP=11.6962;RPPR=120.27;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=54;SRP=120.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:487:0:0:0,-3.61236,-44.1815 0/0:17:17,0:17:691:0:0:0,-5.11751,-62.5183 0/0:9:9,0:9:358:0:0:0,-2.70927,-32.581 0/0:9:9,0:9:354:0:0:0,-2.70927,-32.2206 ./.:.:.:.:.:.:.:. 0/1:11:7,4:7:277:4:157:-11.1959,0,-21.9884 dDocent_Contig_11037 11 . C T 1315.29 . AB=0.295918;ABP=38.4629;AC=3;AF=0.25;AN=12;AO=46;CIGAR=1X;DP=249;DPB=249;DPRA=2.19231;EPP=102.898;EPPR=443.819;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1837;QR=8070;RO=203;RPL=0;RPP=102.898;RPPR=443.819;RPR=46;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=203;SRP=443.819;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:284:0:0:0,-2.10721,-25.934 0/0:50:50,0:50:1959:0:0:0,-15.0515,-176.522 0/0:21:21,0:21:844:0:0:0,-6.32163,-76.2723 0/0:57:56,1:56:2224:1:41:0,-13.0641,-196.239 1/1:16:0,16:0:0:16:628:-56.8529,-4.81648,0 0/1:98:69,29:69:2759:29:1168:-75.8975,0,-218.923 dDocent_Contig_11038 26 . G C 259.344 . AB=0.5;ABP=3.0103;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=7M1X1M;DP=59;DPB=58.4444;DPRA=1.6;EPP=18.2106;EPPR=102.898;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.847826;PAO=0;PQA=0;PQR=0;PRO=0;QA=277;QR=1792;RO=46;RPL=0;RPP=18.2106;RPPR=102.898;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=46;SRP=102.898;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:14:7,0,0,7:7:275:0,0,7:0,0,277:-21.0844,-23.1917,-45.8085,-23.1917,-45.8085,-45.8085,0,-23.0107,-23.0107,-20.9035 0|0:10:6,0,3,0:6:237:0,3,0:0,120,0:-8.07165,-9.87783,-29.3761,0,-19.49,-18.5869,-9.87783,-29.3761,-19.49,-29.3761 0|0:12:12,0,0,0:12:475:0,0,0:0,0,0:0,-3.61236,-43.1021,-3.61236,-43.1021,-43.1021,-3.61236,-43.1021,-43.1021,-43.1021 0|0:10:8,2,0,0:8:305:2,0,0:12,0,0:0,-2.33151,-27.1299,-2.40824,-27.732,-27.7039,-2.40824,-27.732,-27.7039,-27.7039 0|0:4:4,0,0,0:4:157:0,0,0:0,0,0:0,-1.20412,-14.5085,-1.20412,-14.5085,-14.5085,-1.20412,-14.5085,-14.5085,-14.5085 0|0:9:9,0,0,0:9:343:0,0,0:0,0,0:0,-2.70927,-31.2229,-2.70927,-31.2229,-31.2229,-2.70927,-31.2229,-31.2229,-31.2229 dDocent_Contig_11039 8 . C T 456.461 . AB=0.155779;ABP=207.816;AC=2;AF=0.166667;AN=12;AO=33;CIGAR=1X;DP=604;DPB=604;DPRA=1.18841;EPP=74.6689;EPPR=1242.92;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1279;QR=21959;RO=571;RPL=0;RPP=74.6689;RPPR=1242.92;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=571;SRP=1242.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:67:67,0:67:2569:0:0:0,-20.169,-231.405 0/1:110:98,12:98:3771:12:464:-8.99835,0,-306.385 0/1:89:70,19:70:2686:19:737:-39.8696,0,-215.13 0/0:129:127,2:127:4903:2:78:0,-31.4294,-433.885 0/0:100:100,0:100:3831:0:0:0,-30.103,-344.892 0/0:109:109,0:109:4199:0:0:0,-32.8123,-377.979 dDocent_Contig_11042 87 . T C 2342.94 . AB=0.544715;ABP=5.14646;AC=6;AF=0.5;AN=12;AO=81;CIGAR=1X;DP=177;DPB=177;DPRA=0;EPP=178.9;EPPR=211.472;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.716049;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3154;QR=3299;RO=96;RPL=0;RPP=178.9;RPPR=211.472;RPR=81;RUN=1;SAF=81;SAP=178.9;SAR=0;SRF=96;SRP=211.472;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:11,24:11:380:24:936:-74.0194,0,-23.997 0/1:25:16,9:16:543:9:351:-24.4261,0,-41.6673 0/0:42:40,2:40:1366:2:78:0,-5.23979,-115.834 0/1:42:25,17:25:870:17:662:-47.2739,0,-65.975 1/1:12:0,12:0:0:12:464:-42.1111,-3.61236,0 0/1:21:4,17:4:140:17:663:-53.6855,0,-6.6233 dDocent_Contig_11043 13 . C G 276.391 . AB=0.434783;ABP=3.86001;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=197;DPB=197;DPRA=1.73864;EPP=37.7539;EPPR=396.047;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.4375;PAIREDR=0.558011;PAO=0;PQA=0;PQR=0;PRO=0;QA=642;QR=7262;RO=181;RPL=0;RPP=37.7539;RPPR=396.047;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=181;SRP=396.047;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:761:0:0:0,-5.71957,-68.8049 0/0:60:56,4:56:2238:4:164:0,-2.9119,-186.437 0/1:23:13,10:13:529:10:397:-29.162,0,-41.033 0/0:33:32,1:32:1278:1:41:0,-5.83942,-111.195 0/0:25:25,0:25:1004:0:0:0,-7.52575,-90.6536 0/0:37:36,1:36:1452:1:40:0,-7.14243,-126.93 dDocent_Contig_11045 1 . N G 191.313 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42.6667;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=212;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:80:-7.41159,-0.60206,0 1/1:4:0,4:0:0:4:132:-11.418,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11046 58 . T A 1718.51 . AB=0.465116;ABP=3.91929;AC=4;AF=0.333333;AN=12;AO=57;CIGAR=1X;DP=169;DPB=169;DPRA=1.56061;EPP=126.784;EPPR=246.215;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.947368;PAIREDR=0.803571;PAO=0;PQA=0;PQR=0;PRO=0;QA=2222;QR=4289;RO=112;RPL=28;RPP=3.0484;RPPR=3.0103;RPR=29;RUN=1;SAF=28;SAP=3.0484;SAR=29;SRF=56;SRP=3.0103;SRR=56;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:39:32,7:32:1234:7:278:-13.6505,0,-99.6047 0/0:23:23,0:23:866:0:0:0,-6.92369,-78.2463 0/0:8:8,0:8:300:0:0:0,-2.40824,-27.3535 0/0:35:35,0:35:1363:0:0:0,-10.536,-122.943 1/1:17:0,17:0:0:17:653:-59.1029,-5.11751,0 0/1:47:14,33:14:526:33:1291:-102.32,0,-33.5266 dDocent_Contig_11047 13 . A T 698.619 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=3;CIGAR=3X1M1X1M;DP=230;DPB=230;DPRA=1.12195;EPP=9.52472;EPPR=415.59;GTI=0;LEN=1;MEANALT=2;MQM=30.6667;MQMR=59.5263;NS=6;NUMALT=4;ODDS=1.38778e-17;PAIRED=0;PAIREDR=0.8;PAO=0;PQA=0;PQR=0;PRO=0;QA=87;QR=7354;RO=190;RPL=0;RPP=9.52472;RPPR=415.59;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=190;SRP=415.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:29:29,0,0,0,0:29:1131:0,0,0,0:0,0,0,0:0,-8.72987,-102.085,-8.72987,-102.085,-102.085,-8.72987,-102.085,-102.085,-102.085,-8.72987,-102.085,-102.085,-102.085,-102.085 0|0:46:41,3,0,0,0:41:1595:3,0,0,0:87,0,0,0:0,-6.14399,-136.044,-12.3422,-136.948,-143.218,-12.3422,-136.948,-143.218,-143.218,-12.3422,-136.948,-143.218,-143.218,-143.218 0|0:53:52,0,0,1,0:52:2030:0,0,1,0:0,0,41,0:0,-15.6536,-182.507,-15.6536,-182.507,-182.507,-11.86,-179.123,-179.123,-178.822,-15.6536,-182.507,-182.507,-179.123,-182.507 0|0:41:37,0,0,4,0:37:1411:0,0,4,0:0,0,154,0:-1.89012,-13.0282,-128.469,-13.0282,-128.469,-128.469,0,-115.825,-115.825,-114.621,-13.0282,-128.469,-128.469,-115.825,-128.469 0|0:34:10,0,0,2,22:10:390:0,0,2,22:0,0,75,840:-65.9002,-68.9105,-100.97,-68.9105,-100.97,-100.97,-62.7678,-94.8277,-94.8277,-94.2256,0,-32.0697,-32.0697,-25.9289,-25.447 0|0:27:21,0,4,1,0:21:797:0,4,1,0:0,163,41,0:-7.13064,-13.4523,-78.7797,0,-65.3285,-64.1244,-10.0672,-75.3947,-61.9431,-75.0936,-13.4523,-78.7797,-65.3285,-75.3947,-78.7797 dDocent_Contig_11049 128 . T C 15745.6 . AB=0;ABP=0;AC=4;AF=0.333333;AN=12;AO=528;CIGAR=1X;DP=577;DPB=577;DPRA=19.6071;EPP=1149.55;EPPR=109.412;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=17811;QR=1701;RO=49;RPL=0;RPP=1149.55;RPPR=109.412;RPR=528;RUN=1;SAF=0;SAP=1149.55;SAR=528;SRF=0;SRP=109.412;SRR=49;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:8:8,0:8:287:0:0:0,-2.40824,-26.1765 0/0:13:13,0:13:427:0:0:0,-3.91339,-38.7425 0/0:14:13,1:13:450:1:35:0,-0.715791,-37.329 0/0:7:7,0:7:250:0:0:0,-2.10721,-22.8468 1/1:317:0,317:0:0:317:10701:-963.092,-95.4265,0 1/1:218:8,210:8:287:210:7075:-610.689,-39.4481,0 dDocent_Contig_11050 22 . T G 1312.6 . AB=0.077381;ABP=263.639;AC=5;AF=0.416666;AN=12;AO=13;CIGAR=1X5M17D1M;DP=259;DPB=247.875;DPRA=7;EPP=31.2394;EPPR=389.532;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.994382;PAO=1.75;PQA=0;PQR=0;PRO=0;QA=427;QR=6949;RO=178;RPL=0;RPP=31.2394;RPPR=389.532;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=178;SRP=389.532;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:6:6,0,0,0,0:6:232:0,0,0,0:0,0,0,0:0,-1.80618,-21.2479,-1.80618,-21.2479,-21.2479,-1.80618,-21.2479,-21.2479,-21.2479,-1.80618,-21.2479,-21.2479,-21.2479,-21.2479 0|1:35:23,9,0,0,2:23:888:9,0,0,2:360,0,0,74:-22.7478,0,-70.2242,-29.6715,-72.9334,-102.591,-29.6715,-72.9334,-102.591,-102.591,-23.6226,-66.8811,-96.5389,-96.5389,-95.9368 0|1:21:11,0,2,2,6:11:438:0,2,2,6:0,78,79,198:-12.6531,-15.9644,-52.0545,-9.5446,-45.6421,-45.04,-9.45349,-45.5517,-39.1389,-44.9496,0,-36.0716,-29.6616,-29.5709,-34.2654 0|1:38:18,14,0,0,1:18:697:14,0,0,1:530,0,0,34:-38.065,0,-53.0932,-43.4835,-57.3076,-100.751,-43.4835,-57.3076,-100.751,-100.751,-40.7266,-54.5509,-97.9941,-97.9941,-97.6931 0|1:74:58,11,0,0,4:58:2261:11,0,0,4:413,0,0,121:-16.3995,0,-182.584,-33.8592,-185.895,-219.718,-33.8592,-185.895,-219.718,-219.718,-24.1986,-176.221,-210.043,-210.043,-208.839 0|1:85:62,22,0,0,0:62:2433:22,0,0,0:841,0,0,0:-50.6165,0,-193.775,-69.2803,-200.398,-269.388,-69.2803,-200.398,-269.388,-269.388,-69.2803,-200.398,-269.388,-269.388,-269.388 dDocent_Contig_11051 24 . G T 560.136 . AB=0.421053;ABP=5.06748;AC=4;AF=0.333333;AN=12;AO=28;CIGAR=1X;DP=168;DPB=168;DPRA=0;EPP=63.8115;EPPR=304.845;GTI=0;LEN=1;MEANALT=1.16667;MQM=37.4286;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1098;QR=5384;RO=139;RPL=0;RPP=63.8115;RPPR=304.845;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=139;SRP=304.845;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:18:15,3:15:576:3:119:-4.57763,0,-46.7566 0/0:48:46,2:46:1807:2:69:0,-8.25539,-156.67 0/0:34:32,2:32:1207:2:82:0,-3.3502,-102.019 0/0:42:40,2:40:1556:2:72:0,-6.28746,-133.942 0/1:20:6,13:6:238:13:517:-34.9689,0,-15.7102 1/1:6:0,6:0:0:6:239:-19.6887,-1.80618,0 dDocent_Contig_11052 16 . A T 805.136 . AB=0.251748;ABP=79.5585;AC=4;AF=0.333333;AN=12;AO=39;CIGAR=1X;DP=255;DPB=255;DPRA=1.39375;EPP=87.6977;EPPR=463.403;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.981481;PAO=0;PQA=0;PQR=0;PRO=0;QA=1550;QR=8472;RO=216;RPL=0;RPP=87.6977;RPPR=472.048;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=215;SRP=463.403;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:80:77,3:77:2998:3:113:0,-13.5455,-259.386 0/1:51:38,13:38:1494:13:505:-30.438,0,-119.36 0/1:33:28,5:28:1107:5:204:-8.81004,0,-89.9866 0/1:48:36,12:36:1413:12:487:-29.732,0,-112.968 0/1:11:5,6:5:202:6:241:-18.7553,0,-15.2507 0/0:32:32,0:32:1258:0:0:0,-9.63296,-113.495 dDocent_Contig_11053 25 . G A 81.7237 . AB=0.123288;ABP=92.9925;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=271;DPB=271;DPRA=1.9562;EPP=29.068;EPPR=565.422;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.976834;PAO=0;PQA=0;PQR=0;PRO=0;QA=469;QR=10238;RO=259;RPL=0;RPP=29.068;RPPR=565.422;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=259;SRP=565.422;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:42:42,0:42:1658:0:0:0,-12.6433,-149.453 0/1:73:64,9:64:2502:9:348:-9.69525,0,-203.357 0/0:50:50,0:50:2004:0:0:0,-15.0515,-180.556 0/0:61:58,3:58:2298:3:121:0,-7.08263,-195.702 0/0:26:26,0:26:1041:0:0:0,-7.82678,-93.9821 0/0:19:19,0:19:735:0:0:0,-5.71957,-66.4584 dDocent_Contig_11054 125 . G T 220.648 . AB=0.16129;ABP=64.7922;AC=7;AF=0.583333;AN=12;AO=19;CIGAR=1X;DP=162;DPB=162;DPRA=0;EPP=44.2683;EPPR=313.531;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.958042;PAO=0;PQA=0;PQR=0;PRO=0;QA=680;QR=5392;RO=143;RPL=0;RPP=44.2683;RPPR=313.531;RPR=19;RUN=1;SAF=0;SAP=44.2683;SAR=19;SRF=0;SRP=313.531;SRR=143;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:14:11,3:11:414:3:117:-6.69596,0,-33.3938 0/1:23:20,3:20:767:3:105:-2.87076,0,-62.4329 1/1:3:0,3:0:0:3:93:-8.67357,-0.90309,0 1/1:1:0,1:0:0:1:39:-3.89656,-0.30103,0 0/0:96:91,5:91:3429:5:189:0,-11.5233,-291.366 0/1:25:21,4:21:782:4:137:-5.13964,0,-63.1673 dDocent_Contig_11055 7 . T A 1482.54 . AB=0.340782;ABP=42.4243;AC=5;AF=0.416667;AN=12;AO=65;CIGAR=1X;DP=232;DPB=232;DPRA=0;EPP=144.156;EPPR=365.646;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.538462;PAIREDR=0.39521;PAO=0;PQA=0;PQR=0;PRO=0;QA=2485;QR=6381;RO=167;RPL=0;RPP=144.156;RPPR=365.646;RPR=65;RUN=1;SAF=65;SAP=144.156;SAR=0;SRF=167;SRP=365.646;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:25,6:25:964:6:229:-11.6438,0,-77.7421 0/0:53:49,4:49:1864:4:156:0,-1.5373,-153.591 0/1:28:24,4:24:922:4:156:-5.98845,0,-74.8687 0/1:37:28,9:28:1071:9:344:-20.1796,0,-85.5577 0/1:35:17,18:17:646:18:687:-51.6274,0,-47.9396 0/1:48:24,24:24:914:24:913:-68.0364,0,-68.1242 dDocent_Contig_11056 30 . T A 483.172 . AB=0.0888889;ABP=69.0713;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1M1D1M1X6M1X4M;DP=219;DPB=223.6;DPRA=0.849057;EPP=11.6962;EPPR=341.76;GTI=0;LEN=1;MEANALT=6;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=0;PAIREDR=0.967949;PAO=0;PQA=0;PQR=0;PRO=0;QA=150;QR=6083;RO=156;RPL=0;RPP=11.6962;RPPR=341.76;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=156;SRP=341.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:94:79,0,0,4,5,4:79:3082:0,0,4,5,4:0,0,134,166,151:0,-23.7814,-277.177,-23.7814,-277.177,-277.177,-12.9308,-266.331,-266.331,-265.127,-10.3522,-263.753,-263.753,-252.908,-262.248,-11.3899,-264.804,-264.804,-253.959,-251.381,-263.6 0|0:22:17,0,2,1,2,0:17:656:0,2,1,2,0:0,71,40,60,0:-0.675399,-5.79291,-59.6956,0,-53.9135,-53.3114,-2.48338,-56.3994,-50.6173,-56.0984,-1.02543,-54.9078,-49.1267,-51.6118,-54.3057,-5.79291,-59.6956,-53.9135,-56.3994,-54.9078,-59.6956 0|0:37:24,0,0,3,5,3:24:922:0,0,3,5,3:0,0,113,181,123:-7.56283,-14.7876,-90.4956,-14.7876,-90.4956,-90.4956,-5.52063,-81.2384,-81.2384,-80.3353,0,-75.7216,-75.7216,-66.4643,-74.2165,-4.61508,-80.3398,-80.3398,-71.0822,-65.5653,-79.4368 0|1:45:31,4,0,2,4,2:31:1225:4,0,2,4,2:150,0,78,143,48:-2.97514,0,-99.6853,-12.3071,-100.889,-113.172,-5.88251,-94.4767,-106.759,-106.157,-0.632928,-89.2346,-101.517,-95.1045,-100.313,-8.60604,-97.183,-109.465,-103.053,-97.8107,-108.863 0|0:12:0,0,0,0,12,0:0:0:0,0,0,12,0:0,0,0,413,0:-37.4879,-37.4879,-37.4879,-37.4879,-37.4879,-37.4879,-37.4879,-37.4879,-37.4879,-37.4879,-3.61236,-3.61236,-3.61236,-3.61236,0,-37.4879,-37.4879,-37.4879,-37.4879,-3.61236,-37.4879 0|0:9:5,0,0,3,0,1:5:198:0,0,3,0,1:0,0,88,0,32:-5.48577,-6.99092,-23.3411,-6.99092,-23.3411,-23.3411,0,-16.3601,-16.3601,-15.457,-6.99092,-23.3411,-23.3411,-16.3601,-23.3411,-4.40587,-20.7669,-20.7669,-13.7943,-20.7669,-20.4659 dDocent_Contig_11057 23 . T C 431.717 . AB=0.28169;ABP=32.4016;AC=4;AF=0.333333;AN=12;AO=22;CIGAR=2X;DP=116;DPB=116;DPRA=0;EPP=50.7827;EPPR=207.129;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.0106;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.136364;PAIREDR=0.670213;PAO=0;PQA=0;PQR=0;PRO=0;QA=853;QR=3484;RO=94;RPL=0;RPP=50.7827;RPPR=207.129;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=94;SRP=207.129;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:19:18,1:18:660:1:36:0,-2.12129,-56.1313 0|1:25:19,6:19:709:6:240:-14.4497,0,-56.6115 0|1:9:7,2:7:257:2:73:-4.22203,0,-20.7729 0|1:7:6,1:6:230:1:41:-1.98736,0,-16.6699 0|0:26:25,1:25:943:1:37:0,-4.12895,-81.4886 0|1:30:19,11:19:685:11:426:-29.6563,0,-50.4098 dDocent_Contig_11058 17 . A T 82.57 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=2;CIGAR=1X;DP=89;DPB=89;DPRA=0.114943;EPP=7.35324;EPPR=191.928;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=3483;RO=87;RPL=0;RPP=7.35324;RPPR=191.928;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=87;SRP=191.928;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:675:0:0:0,-5.11751,-61.0785 0/0:11:11,0:11:443:0:0:0,-3.31133,-40.2241 0/0:5:5,0:5:205:0:0:0,-1.50515,-18.835 0/0:29:29,0:29:1169:0:0:0,-8.72987,-105.487 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 0/0:25:25,0:25:991:0:0:0,-7.52575,-89.4863 dDocent_Contig_11059 83 . A C 87.7206 . AB=0.263158;ABP=12.2676;AC=1;AF=0.1;AN=10;AO=5;CIGAR=1X;DP=103;DPB=103;DPRA=0.904762;EPP=13.8677;EPPR=215.815;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.989796;PAO=0;PQA=0;PQR=0;PRO=0;QA=175;QR=3329;RO=98;RPL=5;RPP=13.8677;RPPR=215.815;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=98;SRP=215.815;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:924:0:0:0,-8.12781,-83.4729 0/0:12:12,0:12:415:0:0:0,-3.61236,-37.682 0/0:19:19,0:19:628:0:0:0,-5.71957,-56.8302 0/0:26:26,0:26:872:0:0:0,-7.82678,-78.7879 ./.:.:.:.:.:.:.:. 0/1:19:14,5:14:490:5:175:-10.3741,0,-38.713 dDocent_Contig_11060 32 . T C 98.9997 . AB=0.148936;ABP=53.3238;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=224;DPB=224;DPRA=1.32768;EPP=18.2106;EPPR=465.574;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.428571;PAIREDR=0.43318;PAO=0;PQA=0;PQR=0;PRO=0;QA=280;QR=8661;RO=217;RPL=0;RPP=18.2106;RPPR=474.22;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=216;SRP=465.574;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1341:0:0:0,-9.93399,-120.945 0/0:51:51,0:51:2030:0:0:0,-15.3525,-182.885 0/0:26:26,0:26:1037:0:0:0,-7.82678,-93.6215 0/0:27:27,0:27:1076:0:0:0,-8.12781,-97.1276 0/0:40:40,0:40:1597:0:0:0,-12.0412,-143.957 0/1:47:40,7:40:1580:7:280:-11.4229,0,-128.29 dDocent_Contig_11061 14 . T A 1189.42 . AB=0.0493827;ABP=145.872;AC=6;AF=0.5;AN=12;AO=4;CIGAR=6M1X4M;DP=213;DPB=213.545;DPRA=0;EPP=11.6962;EPPR=217.986;GTI=0;LEN=1;MEANALT=4;MQM=56.25;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.989899;PAO=0;PQA=0;PQR=0;PRO=0;QA=163;QR=3825;RO=99;RPL=0;RPP=11.6962;RPPR=217.986;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=99;SRP=217.986;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:15:7,8,0,0:7:279:8,0,0:320,0,0:-13.0367,0,-20.9663,-15.1439,-23.3745,-38.1938,-15.1439,-23.3745,-38.1938,-38.1938 0|1:31:13,15,2,0:13:485:15,2,0:584,77,0:-21.2301,0,-35.1668,-18.8042,-33.3587,-57.9636,-25.1435,-39.6822,-58.5657,-64.8938 0|1:17:7,7,0,0:7:262:7,0,0:280,0,0:-9.42436,0,-19.3725,-11.5316,-21.4798,-33.0344,-11.5316,-21.4798,-33.0344,-33.0344 0|1:21:7,9,1,1:7:268:9,1,1:363,33,40:-13.458,0,-19.2911,-12.893,-19.3364,-34.6224,-12.2607,-18.7032,-31.6237,-33.992 0|1:69:38,28,0,0:38:1468:28,0,0:1122,0,0:-34.3875,0,-112.114,-45.8267,-120.543,-166.471,-45.8267,-120.543,-166.471,-166.471 0|1:60:27,30,0,3:27:1063:30,0,3:1175,0,123:-38.6273,0,-78.4056,-46.7551,-87.4365,-134.278,-36.711,-77.4092,-124.246,-123.343 dDocent_Contig_11062 77 . G A 656.051 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=20;CIGAR=1X;DP=20;DPB=20;DPRA=0;EPP=46.4397;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0.1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=702;QR=0;RO=0;RPL=0;RPP=46.4397;RPPR=0;RPR=20;RUN=1;SAF=0;SAP=46.4397;SAR=20;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:101:-9.42313,-0.90309,0 1/1:6:0,6:0:0:6:210:-19.2423,-1.80618,0 1/1:9:0,9:0:0:9:320:-29.1427,-2.70927,0 1/1:1:0,1:0:0:1:36:-3.59827,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_11063 42 . G A 81.9025 . AB=0.166667;ABP=31.9633;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=225;DPB=225;DPRA=1.16346;EPP=18.2106;EPPR=476.391;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.857143;PAIREDR=0.385321;PAO=0;PQA=0;PQR=0;PRO=0;QA=285;QR=8604;RO=218;RPL=0;RPP=18.2106;RPPR=476.391;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=218;SRP=476.391;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:42:41,1:41:1611:1:41:0,-8.54869,-141.126 0/0:49:48,1:48:1897:1:40:0,-10.7548,-166.932 0/0:17:17,0:17:681:0:0:0,-5.11751,-61.615 0/1:30:25,5:25:999:5:204:-9.71313,0,-81.1736 0/0:34:34,0:34:1355:0:0:0,-10.235,-122.204 0/0:53:53,0:53:2061:0:0:0,-15.9546,-185.679 dDocent_Contig_11064 209 . N G 188.351 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=8.07091;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=205;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:205:-18.835,-1.50515,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11066 57 . G A 659.089 . AB=0.263158;ABP=12.2676;AC=5;AF=0.416667;AN=12;AO=21;CIGAR=1X;DP=269;DPB=269;DPRA=0.108597;EPP=48.6112;EPPR=541.535;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=838;QR=9773;RO=248;RPL=21;RPP=48.6112;RPPR=541.535;RPR=0;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=248;SRP=541.535;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:13,1:13:493:1:41:0,-0.119853,-40.6154 0/0:186:186,0:186:7345:0:0:0,-55.9916,-660.733 0/0:35:35,0:35:1386:0:0:0,-10.536,-124.998 0/1:19:14,5:14:549:5:202:-12.8423,0,-44.0319 1/1:5:0,5:0:0:5:201:-18.4705,-1.50515,0 1/1:10:0,10:0:0:10:394:-35.8174,-3.0103,0 dDocent_Contig_11067 10 . T C 31.6402 . AB=0.106383;ABP=66.2602;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=183;DPB=183;DPRA=1.72794;EPP=13.8677;EPPR=389.532;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=205;QR=7079;RO=178;RPL=0;RPP=13.8677;RPPR=389.532;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=178;SRP=389.532;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:8:8,0:8:324:0:0:0,-2.40824,-29.5288 0/0:11:11,0:11:445:0:0:0,-3.31133,-40.4057 0/0:57:57,0:57:2272:0:0:0,-17.1587,-204.644 0/0:34:34,0:34:1364:0:0:0,-10.235,-123.018 0/0:26:26,0:26:1025:0:0:0,-7.82678,-92.5435 0/1:47:42,5:42:1649:5:205:-4.6866,0,-134.485 dDocent_Contig_11068 12 . G A 2948.9 . AB=0.323529;ABP=76.5849;AC=8;AF=0.666667;AN=12;AO=88;CIGAR=1M1X;DP=272;DPB=272;DPRA=0;EPP=194.1;EPPR=259.244;GTI=0;LEN=1;MEANALT=2.16667;MQM=59.9432;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3474;QR=4634;RO=118;RPL=0;RPP=194.1;RPPR=259.244;RPR=88;RUN=1;SAF=88;SAP=194.1;SAR=0;SRF=118;SRP=259.244;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:36:13,0,3,20:13:516:0,3,20:0,119,799:-61.8923,-65.8057,-108.282,-56.0104,-98.487,-97.5839,0,-42.4777,-32.6821,-36.4571 0|1:100:40,0,30,30:40:1545:0,30,30:0,1175,1183:-85.2859,-97.3271,-224.194,-0.729791,-127.595,-118.564,0,-126.867,-30.2657,-117.836 0|1:65:34,0,21,10:34:1354:0,21,10:0,837,407:-58.6812,-68.9162,-180.405,0,-111.483,-105.162,-35.3397,-146.83,-77.9076,-143.819 0|1:47:31,4,2,10:31:1219:4,2,10:155,80,386:-22.361,-18.9607,-118.014,-25.1013,-112.628,-124.758,0,-87.5233,-93.6647,-97.2448 1|1:10:0,3,0,7:0:0:3,0,7:121,0,260:-31.6212,-21.6374,-20.7344,-31.6212,-21.6374,-31.6212,-10.3771,0,-10.3771,-8.2699 1|1:14:0,0,3,11:0:0:0,3,11:0,118,439:-46.2569,-46.2569,-46.2569,-36.5516,-36.5516,-35.6485,-10.0994,-10.0994,0,-6.78809 dDocent_Contig_11071 17 . T C 2516.41 . AB=0.454082;ABP=6.59988;AC=4;AF=0.333333;AN=12;AO=90;CIGAR=1X;DP=254;DPB=254;DPRA=1.61429;EPP=198.443;EPPR=359.132;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3558;QR=6607;RO=164;RPL=0;RPP=198.443;RPPR=359.132;RPR=90;RUN=1;SAF=90;SAP=198.443;SAR=0;SRF=164;SRP=359.132;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:19,14:19:772:14:556:-40.447,0,-59.8655 0/1:82:29,53:29:1162:53:2081:-162.795,0,-80.1745 0/1:55:37,18:37:1492:18:719:-48.4803,0,-117.966 0/1:26:22,4:22:882:4:162:-7.13997,0,-71.8622 0/0:28:28,0:28:1133:0:0:0,-8.42884,-102.249 0/0:30:29,1:29:1166:1:40:0,-5.03522,-101.222 dDocent_Contig_11072 12 . T C 440.271 . AB=0.165563;ABP=149.707;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=1X;DP=322;DPB=322;DPRA=4.4152;EPP=57.2971;EPPR=645.766;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1009;QR=11781;RO=296;RPL=0;RPP=57.2971;RPPR=645.766;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=296;SRP=645.766;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:550:0:0:0,-4.21442,-49.8368 0/0:3:3,0:3:123:0:0:0,-0.90309,-11.4648 0/0:15:15,0:15:596:0:0:0,-4.51545,-53.9765 0/0:5:5,0:5:197:0:0:0,-1.50515,-18.104 0/1:151:125,25:125:4968:25:1009:-45.5499,0,-401.457 0/0:134:134,0:134:5347:0:0:0,-40.338,-481.08 dDocent_Contig_11073 16 . C T 194.662 . AB=0.152174;ABP=99.688;AC=3;AF=0.25;AN=12;AO=16;CIGAR=1X;DP=210;DPB=210;DPRA=0.978873;EPP=37.7539;EPPR=424.276;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.9375;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=649;QR=7679;RO=194;RPL=0;RPP=37.7539;RPPR=424.276;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=194;SRP=424.276;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:47:45,2:45:1801:2:80:0,-6.55662,-154.709 0/1:65:57,8:57:2250:8:324:-9.96224,0,-183.099 0/0:29:29,0:29:1152:0:0:0,-8.72987,-103.961 0/0:42:42,0:42:1650:0:0:0,-12.6433,-148.727 0/1:10:6,4:6:241:4:163:-12.0481,0,-19.056 0/1:17:15,2:15:585:2:82:-2.66217,0,-47.872 dDocent_Contig_11074 13 . T A 541.538 . AB=0.171717;ABP=188.353;AC=4;AF=0.4;AN=10;AO=37;CIGAR=1X;DP=239;DPB=239;DPRA=0;EPP=83.3548;EPPR=441.648;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0.945946;PAIREDR=0.99505;PAO=0;PQA=0;PQR=0;PRO=0;QA=1445;QR=8037;RO=202;RPL=0;RPP=83.3548;RPPR=441.648;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=202;SRP=441.648;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:38,3:38:1536:3:116:0,-1.52521,-127.656 0/1:98:80,18:80:3180:18:726:-36.1642,0,-256.769 0/1:36:31,5:31:1226:5:170:-4.79051,0,-99.7768 0/1:54:49,5:49:1942:5:201:-2.2149,0,-158.724 ./.:.:.:.:.:.:.:. 0/1:10:4,6:4:153:6:232:-18.235,0,-11.1276 dDocent_Contig_11075 9 . T A 30.1635 . AB=0.12766;ABP=59.6072;AC=3;AF=0.25;AN=12;AO=8;CIGAR=1X;DP=96;DPB=96;DPRA=1.42;EPP=20.3821;EPPR=194.1;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.772727;PAO=0;PQA=0;PQR=0;PRO=0;QA=308;QR=3343;RO=88;RPL=0;RPP=20.3821;RPPR=194.1;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=88;SRP=194.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:22,3:22:830:3:115:-3.19914,0,-67.4937 0/1:19:17,2:17:659:2:78:-1.6839,0,-53.9276 0/0:17:17,0:17:642:0:0:0,-5.11751,-58.1142 0/0:24:22,2:22:828:2:76:0,-0.0100457,-67.622 0/1:3:2,1:2:78:1:39:-2.99347,0,-6.50038 0/0:8:8,0:8:306:0:0:0,-2.40824,-27.9006 dDocent_Contig_11077 23 . T A 138.01 . AB=0.26087;ABP=14.4341;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=222;DPB=222;DPRA=0.85;EPP=22.5536;EPPR=465.534;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.666667;PAIREDR=0.525822;PAO=0;PQA=0;PQR=0;PRO=0;QA=365;QR=8221;RO=213;RPL=0;RPP=22.5536;RPPR=465.534;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=213;SRP=465.534;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:34,0:34:1298:0:0:0,-10.235,-117.104 0/0:60:60,0:60:2319:0:0:0,-18.0618,-208.914 0/0:40:39,1:39:1514:1:41:0,-7.94663,-132.427 0/1:23:17,6:17:664:6:243:-15.3239,0,-53.1714 0/0:26:26,0:26:1009:0:0:0,-7.82678,-91.1176 0/0:39:37,2:37:1417:2:81:0,-4.05444,-120.116 dDocent_Contig_11078 11 . A G 983.826 . AB=0.251397;ABP=99.101;AC=6;AF=0.5;AN=12;AO=45;CIGAR=1X;DP=179;DPB=179;DPRA=0;EPP=100.727;EPPR=293.988;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.333333;PAIREDR=0.514925;PAO=0;PQA=0;PQR=0;PRO=0;QA=1792;QR=5354;RO=134;RPL=0;RPP=100.727;RPPR=293.988;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=134;SRP=293.988;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:19,9:19:757:9:356:-23.9708,0,-60.0222 0/1:34:29,5:29:1154:5:200:-8.1449,0,-93.9061 0/1:26:22,4:22:872:4:164:-7.32312,0,-70.959 0/1:28:22,6:22:883:6:242:-13.7285,0,-71.3507 0/1:39:30,9:30:1203:9:349:-20.0214,0,-96.7994 0/1:24:12,12:12:485:12:481:-36.4157,0,-36.7767 dDocent_Contig_11081 13 . C G 387.985 . AB=0.274194;ABP=30.4689;AC=3;AF=0.25;AN=12;AO=19;CIGAR=1X;DP=121;DPB=121;DPRA=2.13043;EPP=44.2683;EPPR=224.5;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.631579;PAIREDR=0.745098;PAO=0;PQA=0;PQR=0;PRO=0;QA=765;QR=4023;RO=102;RPL=0;RPP=44.2683;RPPR=224.5;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=102;SRP=224.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:5:5,0:5:198:0:0:0,-1.50515,-18.1969 0/0:36:34,2:34:1346:2:81:0,-3.15135,-113.709 0/1:19:8,11:8:326:11:446:-34.776,0,-23.9903 0/1:22:19,3:19:746:3:115:-4.10055,0,-60.836 0/1:21:18,3:18:713:3:123:-5.14316,0,-58.1726 0/0:18:18,0:18:694:0:0:0,-5.41854,-62.7762 dDocent_Contig_11082 55 . G C 1786.78 . AB=0.463768;ABP=4.58383;AC=5;AF=0.416667;AN=12;AO=67;CIGAR=1X;DP=177;DPB=177;DPRA=0;EPP=148.499;EPPR=241.872;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990909;PAO=0;PQA=0;PQR=0;PRO=0;QA=2652;QR=4318;RO=110;RPL=67;RPP=148.499;RPPR=241.872;RPR=0;RUN=1;SAF=67;SAP=148.499;SAR=0;SRF=110;SRP=241.872;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:13:10,3:10:346:3:121:-7.36681,0,-27.5482 0/0:39:36,3:36:1429:3:122:0,-0.367677,-117.493 0/1:43:27,16:27:1089:16:641:-45.0791,0,-85.3518 0/1:29:23,6:23:896:6:245:-13.6996,0,-72.2051 0/1:30:11,19:11:436:19:730:-56.9885,0,-30.5604 0/1:23:3,20:3:122:20:793:-64.7648,0,-4.4488 dDocent_Contig_11083 11 . A G 197.382 . AB=0.174603;ABP=60.9507;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=347;DPB=347;DPRA=1.33654;EPP=39.9253;EPPR=719.596;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.764706;PAIREDR=0.787879;PAO=0;PQA=0;PQR=0;PRO=0;QA=688;QR=13189;RO=330;RPL=0;RPP=39.9253;RPPR=719.596;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=330;SRP=719.596;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:42:42,0:42:1677:0:0:0,-12.6433,-151.154 0/0:76:70,6:70:2817:6:245:0,-0.448807,-231.206 0/0:45:45,0:45:1808:0:0:0,-13.5463,-162.928 0/1:63:52,11:52:2068:11:443:-21.2608,0,-167.342 0/0:60:60,0:60:2389:0:0:0,-18.0618,-215.162 0/0:61:61,0:61:2430:0:0:0,-18.3628,-218.856 dDocent_Contig_11084 24 . A T 226.711 . AB=0.333333;ABP=9.52472;AC=1;AF=0.1;AN=10;AO=9;CIGAR=1X;DP=84;DPB=84;DPRA=1.89474;EPP=22.5536;EPPR=165.871;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=356;QR=2982;RO=75;RPL=0;RPP=22.5536;RPPR=165.871;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=75;SRP=165.871;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:2:2,0:2:81:0:0:0,-0.60206,-7.68573 0/1:27:18,9:18:702:9:356:-24.2729,0,-55.3754 0/0:8:8,0:8:326:0:0:0,-2.40824,-29.7099 ./.:.:.:.:.:.:.:. 0/0:7:7,0:7:279:0:0:0,-2.10721,-25.4808 0/0:40:40,0:40:1594:0:0:0,-12.0412,-143.692 dDocent_Contig_11085 13 . C A 47.2085 . AB=0.147059;ABP=39.7976;AC=2;AF=0.166667;AN=12;AO=5;CIGAR=1X;DP=85;DPB=85;DPRA=1.33333;EPP=13.8677;EPPR=176.728;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0;PAIREDR=0.9625;PAO=0;PQA=0;PQR=0;PRO=0;QA=193;QR=3231;RO=80;RPL=0;RPP=13.8677;RPPR=176.728;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=80;SRP=176.728;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:1:1,0:1:41:0:0:0,-0.30103,-4.09457 0/1:4:2,2:2:82:2:74:-5.8199,0,-6.57556 0/0:10:10,0:10:397:0:0:0,-3.0103,-36.0839 0/0:13:13,0:13:532:0:0:0,-3.91339,-48.2261 0/0:27:27,0:27:1081:0:0:0,-8.12781,-97.5785 0/1:30:27,3:27:1098:3:119:-2.06411,0,-90.072 dDocent_Contig_11086 11 . T C 1937.34 . AB=0.0606061;ABP=279.709;AC=0;AF=0;AN=12;AO=10;CIGAR=1M1X9M;DP=554;DPB=556.727;DPRA=1.03774;EPP=24.725;EPPR=899.828;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.828087;PAO=0;PQA=0;PQR=0;PRO=0;QA=406;QR=16263;RO=413;RPL=0;RPP=24.725;RPPR=899.828;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=413;SRP=899.828;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:95:66,0,0,19,8:66:2611:0,0,19,8:0,0,744,324:-41.2918,-61.1598,-276.043,-61.1598,-276.043,-276.043,0,-214.876,-214.876,-209.156,-34.4404,-249.326,-249.326,-188.159,-246.918 0|0:104:76,0,8,17,2:76:3004:0,8,17,2:0,324,655,82:-30.8727,-53.7509,-300.964,-27.0296,-274.247,-271.838,0,-247.203,-220.485,-242.085,-46.9815,-294.196,-267.478,-240.434,-293.594 0|0:61:23,0,2,27,8:23:901:0,2,27,8:0,82,1082,325:-82.2126,-89.1363,-163.222,-82.3677,-156.453,-155.851,0,-74.0794,-67.3104,-65.9516,-62.3296,-136.415,-129.646,-47.2708,-134.006 0|0:93:81,0,0,5,5:81:3196:0,0,5,5:0,0,205,193:0,-24.3834,-287.371,-24.3834,-287.371,-287.371,-7.43811,-270.45,-270.45,-268.945,-8.52786,-271.524,-271.524,-254.602,-270.019 0|0:135:108,25,0,0,1:108:4228:25,0,0,1:962,0,0,41:-46.5783,0,-340.243,-79.0896,-347.769,-426.743,-79.0896,-347.769,-426.743,-426.743,-75.7042,-344.385,-423.358,-423.358,-423.057 0|0:66:59,5,0,0,1:59:2323:5,0,0,1:176,0,0,41:0,-3.42042,-193.08,-17.7608,-194.586,-208.907,-17.7608,-194.586,-208.907,-208.907,-14.366,-191.201,-205.523,-205.523,-205.222 dDocent_Contig_11087 76 . C T 848.555 . AB=0.310078;ABP=43.4266;AC=1;AF=0.0833333;AN=12;AO=41;CIGAR=1X;DP=492;DPB=492;DPRA=1.34694;EPP=92.0407;EPPR=982.344;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.997783;PAO=0;PQA=0;PQR=0;PRO=0;QA=1424;QR=16075;RO=451;RPL=41;RPP=92.0407;RPPR=982.344;RPR=0;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=451;SRP=982.344;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:89:89,0:89:3142:0:0:0,-26.7917,-283.009 0/0:69:68,1:68:2366:1:36:0,-17.1728,-209.595 0/0:34:34,0:34:1199:0:0:0,-10.235,-108.207 0/0:101:101,0:101:3615:0:0:0,-30.404,-325.538 0/1:129:89,40:89:3227:40:1388:-86.3784,0,-251.793 0/0:70:70,0:70:2526:0:0:0,-21.0721,-227.581 dDocent_Contig_11088 10 . G A 3511.45 . AB=0.55;ABP=7.78754;AC=6;AF=0.5;AN=12;AO=121;CIGAR=1X;DP=220;DPB=220;DPRA=0;EPP=265.758;EPPR=217.986;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4741;QR=3929;RO=99;RPL=0;RPP=265.758;RPPR=217.986;RPR=121;RUN=1;SAF=121;SAP=265.758;SAR=0;SRF=99;SRP=217.986;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:4,17:4:163:17:679:-55.1167,0,-8.7368 0/1:41:13,28:13:517:28:1092:-86.2292,0,-34.5307 0/1:31:17,14:17:689:14:536:-39.246,0,-53.0078 0/1:25:8,17:8:321:17:681:-54.0949,0,-21.7306 0/1:29:8,21:8:319:21:800:-63.5809,0,-20.3461 0/1:73:49,24:49:1920:24:953:-64.0995,0,-151.034 dDocent_Contig_11089 18 . T A 215.636 . AB=0.238095;ABP=28.0339;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=314;DPB=314;DPRA=0.308824;EPP=24.725;EPPR=663.138;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.986842;PAO=0;PQA=0;PQR=0;PRO=0;QA=396;QR=12095;RO=304;RPL=0;RPP=24.725;RPPR=663.138;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=304;SRP=663.138;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:48,0:48:1903:0:0:0,-14.4494,-171.472 0/0:73:73,0:73:2919:0:0:0,-21.9752,-262.804 0/0:84:84,0:84:3343:0:0:0,-25.2865,-300.929 0/0:67:67,0:67:2659:0:0:0,-20.169,-239.438 0/1:19:11,8:11:447:8:316:-23.0831,0,-34.8661 0/1:23:21,2:21:824:2:80:-0.667885,0,-67.537 dDocent_Contig_11090 44 . T G 14093.5 . AB=0.665541;ABP=73.4658;AC=11;AF=0.916667;AN=12;AO=418;CIGAR=1X3M;DP=529;DPB=590.25;DPRA=0;EPP=910.686;EPPR=135.47;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.995215;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=16321;QR=2380;RO=61;RPL=0;RPP=910.686;RPPR=135.47;RPR=418;RUN=1;SAF=418;SAP=910.686;SAR=0;SRF=61;SRP=135.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:105:17,29,59:17:668:29,59:1133,2319:-223.798,-135.775,-181.987,-38.1972,0,-75.379 1|1:56:10,10,36:10:381:10,36:401,1386:-112.566,-82.5337,-110.771,-1.8106,0,-22.2119 0|1:61:23,0,37:23:905:0,37:0,1431:-110.894,-117.818,-192.269,0,-74.7459,-63.6078 1|1:74:2,7,65:2:79:7,65:257,2544:-223.049,-202.647,-207.04,-14.4777,0,-1.41786 1|1:113:6,2,105:6:240:2,105:76,4122:-348.986,-344.56,-363.728,-11.823,-25.3806,0 1|1:120:3,1,116:3:107:1,116:41,4519:-396.673,-394.192,-402.61,-26.2388,-31.5221,0 dDocent_Contig_11091 26 . C A 319.63 . AB=0.137363;ABP=210.899;AC=2;AF=0.166667;AN=12;AO=38;CIGAR=1X;DP=503;DPB=503;DPRA=1.15461;EPP=3.23888;EPPR=584.914;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.7118;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.754839;PAO=0;PQA=0;PQR=0;PRO=0;QA=1508;QR=18630;RO=465;RPL=0;RPP=85.5263;RPPR=1012.74;RPR=38;RUN=1;SAF=18;SAP=3.23888;SAR=20;SRF=409;SRP=584.914;SRR=56;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:62:62,0:62:2499:0:0:0,-18.6639,-222.23 0/0:86:79,7:79:3153:7:281:0,-0.227514,-258.187 0/0:83:77,6:77:3093:6:235:0,-3.46704,-254.547 0/1:77:65,12:65:2608:12:486:-20.9115,0,-211.669 0/0:90:90,0:90:3611:0:0:0,-27.0927,-324.997 0/1:105:92,13:92:3666:13:506:-14.273,0,-298.344 dDocent_Contig_11092 7 . T C 81.6722 . AB=0.113043;ABP=152.578;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=331;DPB=331;DPRA=1.63889;EPP=46.4397;EPPR=678.338;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.6;PAIREDR=0.498392;PAO=0;PQA=0;PQR=0;PRO=0;QA=768;QR=11880;RO=311;RPL=0;RPP=46.4397;RPPR=678.338;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=311;SRP=678.338;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:36,0:36:1361:0:0:0,-10.8371,-122.772 0/0:68:67,1:67:2580:1:39:0,-16.5735,-228.497 0/0:58:56,2:56:2148:2:73:0,-10.5286,-186.616 0/0:54:50,4:50:1898:4:153:0,-2.11401,-156.926 0/1:59:53,6:53:2016:6:233:-3.57931,0,-163.911 0/1:56:49,7:49:1877:7:270:-7.80785,0,-152.32 dDocent_Contig_11094 116 . A G 3344.28 . AB=0.488806;ABP=3.30199;AC=6;AF=0.5;AN=12;AO=135;CIGAR=1X;DP=288;DPB=288;DPRA=3.4;EPP=296.159;EPPR=335.246;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4675;QR=5365;RO=153;RPL=0;RPP=296.159;RPPR=335.246;RPR=135;RUN=1;SAF=0;SAP=296.159;SAR=135;SRF=0;SRP=335.246;SRR=153;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:75:30,45:30:1052:45:1561:-118.207,0,-72.4129 0/1:93:46,47:46:1593:47:1627:-118.725,0,-115.66 0/1:25:8,17:8:288:17:588:-45.7202,0,-18.7417 0/1:75:53,22:53:1865:22:759:-46.0528,0,-145.553 0/0:16:16,0:16:567:0:0:0,-4.81648,-51.3618 1/1:4:0,4:0:0:4:140:-12.9449,-1.20412,0 dDocent_Contig_11095 19 . T C 5482.92 . AB=0.543046;ABP=7.87095;AC=8;AF=0.666667;AN=12;AO=180;CIGAR=1X;DP=318;DPB=318;DPRA=0;EPP=393.875;EPPR=302.673;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7164;QR=4953;RO=138;RPL=0;RPP=393.875;RPPR=302.673;RPR=180;RUN=1;SAF=180;SAP=393.875;SAR=0;SRF=138;SRP=302.673;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:69:26,43:26:886:43:1714:-133.716,0,-59.2722 0/1:74:36,38:36:1291:38:1510:-113.872,0,-94.2032 0/1:80:29,51:29:1076:51:2015:-157.459,0,-73.0667 0/1:79:47,32:47:1700:32:1287:-92.3142,0,-129.49 1/1:5:0,5:0:0:5:199:-18.2884,-1.50515,0 1/1:11:0,11:0:0:11:439:-39.865,-3.31133,0 dDocent_Contig_11096 16 . C G 56.7257 . AB=0.111111;ABP=38.4777;AC=3;AF=0.3;AN=10;AO=4;CIGAR=1X;DP=87;DPB=87;DPRA=0.711864;EPP=11.6962;EPPR=183.243;GTI=0;LEN=1;MEANALT=1;MQM=58.5;MQMR=60;NS=5;NUMALT=1;ODDS=1.73472e-18;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=159;QR=3283;RO=83;RPL=0;RPP=11.6962;RPPR=183.243;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=83;SRP=183.243;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1065:0:0:0,-8.12781,-96.1398 0/1:27:24,3:24:939:3:118:-2.86696,0,-76.6788 0/0:16:16,0:16:647:0:0:0,-4.81648,-58.5628 0/0:16:16,0:16:632:0:0:0,-4.81648,-57.2136 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_11097 43 . G A 137.942 . AB=0.555556;ABP=3.25157;AC=1;AF=0.1;AN=10;AO=5;CIGAR=1X2M1X;DP=119;DPB=119;DPRA=0.327273;EPP=13.8677;EPPR=250.558;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=8.67362e-19;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=197;QR=4440;RO=114;RPL=0;RPP=13.8677;RPPR=250.558;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=114;SRP=250.558;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 0|0:42:42,0:42:1625:0:0:0,-12.6433,-146.494 0|1:9:4,5:4:158:5:197:-15.3962,0,-11.891 0|0:24:24,0:24:950:0:0:0,-7.22472,-85.808 0|0:36:36,0:36:1388:0:0:0,-10.8371,-125.184 0|0:8:8,0:8:319:0:0:0,-2.40824,-29.0774 dDocent_Contig_11098 12 . G C 115.412 . AB=0.206897;ABP=24.6501;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=184;DPB=184;DPRA=0.852941;EPP=24.725;EPPR=380.846;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.7011;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.9;PAIREDR=0.994253;PAO=0;PQA=0;PQR=0;PRO=0;QA=402;QR=6866;RO=174;RPL=0;RPP=24.725;RPPR=380.846;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=174;SRP=380.846;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:33,2:33:1297:2:82:0,-2.75637,-109.222 0/1:29:23,6:23:912:6:238:-13.0641,0,-73.6537 0/0:19:18,1:18:719:1:41:0,-1.625,-60.9433 0/0:33:32,1:32:1238:1:41:0,-5.83942,-107.602 0/0:30:30,0:30:1191:0:0:0,-9.0309,-107.454 0/0:38:38,0:38:1509:0:0:0,-11.4391,-135.983 dDocent_Contig_11100 17 . A G 67.6035 . AB=0.272727;ABP=7.94546;AC=1;AF=0.1;AN=10;AO=3;CIGAR=1X;DP=104;DPB=104;DPRA=0.473118;EPP=9.52472;EPPR=222.329;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=122;QR=3996;RO=101;RPL=0;RPP=9.52472;RPPR=222.329;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=101;SRP=222.329;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 0/1:11:8,3:8:321:3:122:-8.06116,0,-25.9457 0/0:15:15,0:15:606:0:0:0,-4.51545,-54.8775 0/0:2:2,0:2:82:0:0:0,-0.60206,-7.77968 0/0:33:33,0:33:1278:0:0:0,-9.93399,-115.279 0/0:43:43,0:43:1709:0:0:0,-12.9443,-154.034 dDocent_Contig_11101 68 . A G 137.315 . AB=0.205882;ABP=28.557;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=416;DPB=416;DPRA=0.445026;EPP=18.2106;EPPR=888.971;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.987745;PAO=0;PQA=0;PQR=0;PRO=0;QA=277;QR=15971;RO=408;RPL=7;RPP=18.2106;RPPR=888.971;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=408;SRP=888.971;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1639:0:0:0,-12.3422,-147.742 0/0:5:5,0:5:185:0:0:0,-1.50515,-17.0042 0/0:1:1,0:1:41:0:0:0,-0.30103,-4.09457 0/1:34:26,7:26:1018:7:277:-15.254,0,-81.894 0/0:222:222,0:222:8665:0:0:0,-66.8287,-779.404 0/0:113:113,0:113:4423:0:0:0,-34.0164,-398.03 dDocent_Contig_11103 39 . G C 2060.21 . AB=0.0638298;ABP=80.6751;AC=5;AF=0.416667;AN=12;AO=3;CIGAR=3M2D9M2X3M1X2M1X;DP=251;DPB=236.696;DPRA=2.47368;EPP=9.52472;EPPR=226.672;GTI=0;LEN=1;MEANALT=4;MQM=53;MQMR=60;NS=6;NUMALT=5;ODDS=5.55112e-17;PAIRED=0;PAIREDR=0.718447;PAO=0;PQA=0;PQR=0;PRO=0;QA=117;QR=3520;RO=103;RPL=0;RPP=9.52472;RPPR=226.672;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=103;SRP=226.672;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:47:18,11,8,7,3,0:18:622:11,8,7,3,0:426,319,259,117,0:-29.5733,0,-47.209,-8.71604,-24.2399,-56.8316,-13.8139,-29.3362,-38.0557,-62.2265,-25.4112,-40.9379,-49.6575,-54.7519,-75.0319,-34.9918,-50.5203,-59.2398,-64.3337,-75.935,-85.5166 0|1:45:11,20,0,6,0,0:11:381:20,0,6,0,0:772,0,232,0,0:-60.1282,0,-24.9622,-63.4396,-30.9828,-94.4014,-44.3778,-11.908,-75.3416,-73.5354,-63.4396,-30.9828,-94.4014,-75.3416,-94.4014,-63.4396,-30.9828,-94.4014,-75.3416,-94.4014,-94.4014 0|0:19:17,0,0,0,0,0:17:597:0,0,0,0,0:0,0,0,0,0:0,-5.11751,-53.8368,-5.11751,-53.8368,-53.8368,-5.11751,-53.8368,-53.8368,-53.8368,-5.11751,-53.8368,-53.8368,-53.8368,-53.8368,-5.11751,-53.8368,-53.8368,-53.8368,-53.8368,-53.8368 0|1:46:30,1,0,12,0,0:30:995:1,0,12,0,0:39,0,466,0,0:-29.2671,-35.0917,-115.245,-38.298,-115.546,-118.753,0,-77.2477,-80.4552,-76.8428,-38.298,-115.546,-118.753,-80.4552,-118.753,-38.298,-115.546,-118.753,-80.4552,-118.753,-118.753 0|1:32:13,0,2,11,0,6:13:443:0,2,11,0,6:0,78,434,0,223:-31.8095,-35.7229,-71.6476,-29.3106,-65.2345,-64.6324,0,-35.9239,-29.5084,-32.6126,-35.7229,-71.6476,-65.2345,-35.9239,-71.6476,-17.865,-53.7811,-47.3676,-18.052,-53.7811,-51.9749 0|1:62:14,5,7,21,0,11:14:482:5,7,21,0,11:199,256,834,0,392:-64.4647,-52.2899,-89.9285,-47.7641,-70.5173,-84.7995,0,-22.7547,-18.2283,-32.8262,-68.6791,-91.4336,-86.9067,-39.1478,-107.823,-37.2912,-60.0425,-55.5164,-7.7529,-76.4319,-73.1206 dDocent_Contig_11105 13 . C A 399.367 . AB=0.764706;ABP=13.3567;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=99;DPB=99;DPRA=0.414634;EPP=31.2394;EPPR=189.757;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.988372;PAO=0;PQA=0;PQR=0;PRO=0;QA=528;QR=3435;RO=86;RPL=0;RPP=31.2394;RPPR=189.757;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=86;SRP=189.757;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:592:0:0:0,-4.51545,-53.6131 0/0:33:33,0:33:1337:0:0:0,-9.93399,-120.586 0/0:9:9,0:9:368:0:0:0,-2.70927,-33.4854 0/0:25:25,0:25:975:0:0:0,-7.52575,-88.0491 0/1:5:2,3:2:82:3:123:-9.95964,0,-6.27453 0/1:12:2,10:2:81:10:405:-33.1983,0,-4.07337 dDocent_Contig_11109 10 . C G 1189.02 . AB=0.43;ABP=7.26639;AC=1;AF=0.0833333;AN=12;AO=43;CIGAR=1X;DP=912;DPB=912;DPRA=0.615764;EPP=96.3836;EPPR=1890.02;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1670;QR=34476;RO=869;RPL=0;RPP=96.3836;RPPR=1890.02;RPR=43;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=869;SRP=1890.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:85:85,0:85:3344:0:0:0,-25.5875,-301.031 0/1:100:57,43:57:2250:43:1670:-120.425,0,-172.568 0/0:50:50,0:50:2011:0:0:0,-15.0515,-181.176 0/0:45:45,0:45:1791:0:0:0,-13.5463,-161.401 0/0:373:373,0:373:14802:0:0:0,-112.284,-1331.07 0/0:259:259,0:259:10278:0:0:0,-77.9668,-924.361 dDocent_Contig_11110 32 . A C 400.691 . AB=0.5;ABP=3.0103;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=118;DPB=118;DPRA=1.27778;EPP=35.5824;EPPR=226.672;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990291;PAO=0;PQA=0;PQR=0;PRO=0;QA=589;QR=4132;RO=103;RPL=0;RPP=35.5824;RPPR=226.672;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=103;SRP=226.672;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:562:0:0:0,-4.21442,-50.9235 0/0:30:30,0:30:1207:0:0:0,-9.0309,-108.905 0/0:18:17,1:17:679:1:37:0,-1.72071,-57.74 0/0:21:21,0:21:840:0:0:0,-6.32163,-75.9142 0/1:28:14,14:14:565:14:552:-41.592,0,-42.764 0/0:7:7,0:7:279:0:0:0,-2.10721,-25.4806 dDocent_Contig_11111 107 . N G 3456.48 . AB=0.761905;ABP=53.0576;AC=12;AF=1;AN=12;AO=110;CIGAR=1X4M;DP=133;DPB=133;DPRA=0;EPP=241.872;EPPR=0;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=0;NS=6;NUMALT=3;ODDS=6.93889e-18;PAIRED=0.963636;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3604;QR=0;RO=0;RPL=0;RPP=241.872;RPPR=0;RPR=110;RUN=1;SAF=0;SAP=241.872;SAR=110;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:21:0,0,5,16:0:0:0,5,16:0,172,498:-54.2808,-54.2808,-54.2808,-40.3036,-40.3036,-38.7984,-14.3133,-14.3133,0,-9.49679 1|1:27:0,0,1,25:0:0:0,1,25:0,35,820:-73.892,-73.892,-73.892,-71.043,-71.043,-70.742,-7.52575,-7.52575,-4.53308,0 1|1:16:0,4,1,11:0:0:4,1,11:139,35,368:-41.0885,-29.7844,-28.5802,-38.24,-26.9353,-37.939,-11.2992,0,-8.45097,-7.98787 1|1:15:0,0,3,12:0:0:0,3,12:0,101,382:-39.2641,-39.2641,-39.2641,-31.0764,-31.0764,-30.1733,-8.52064,-8.52064,0,-4.90828 1|1:32:0,2,5,25:0:0:2,5,25:69,169,838:-81.5613,-75.955,-75.3529,-67.8609,-62.2544,-66.3557,-13.6951,-8.08739,0,-6.16936 1|1:22:0,0,1,21:0:0:0,1,21:0,35,698:-62.7831,-62.7831,-62.7831,-59.9346,-59.9346,-59.6335,-6.32163,-6.32163,-3.12403,0 dDocent_Contig_11112 9 . T C 20423.6 . AB=0.0588235;ABP=462.852;AC=7;AF=0.583333;AN=12;AO=16;CIGAR=1X6M1X4M7D1M1X;DP=940;DPB=812.286;DPRA=0;EPP=37.7539;EPPR=144.156;GTI=0;LEN=1;MEANALT=8.5;MQM=29;MQMR=60;NS=6;NUMALT=6;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=464;QR=2563;RO=65;RPL=0;RPP=37.7539;RPPR=144.156;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=65;SRP=144.156;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:104:10,5,0,64,2,15,0:10:395:5,0,64,2,15,0:186,0,2370,77,435,0:-186.33,-174.946,-205.951,-189.34,-207.456,-221.85,0,-18.1299,-32.528,-13.2621,-183.095,-201.211,-215.605,-26.2807,-215.003,-158.782,-176.897,-191.29,-1.9921,-185.046,-186.775,-189.34,-207.456,-221.85,-32.528,-215.605,-191.29,-221.85 0|1:134:22,23,0,62,8,0,0:22:873:23,0,62,8,0,0:862,0,2369,281,0,0:-186.133,-126.447,-191.396,-192.756,-198.32,-264.628,0,-5.57481,-71.8816,-53.2178,-171.63,-177.195,-243.502,-50.7578,-241.094,-192.756,-198.32,-264.628,-71.8816,-243.502,-264.628,-192.756,-198.32,-264.628,-71.8816,-243.502,-264.628,-264.628 0|1:134:23,17,0,82,0,0,0:23:901:17,0,82,0,0,0:647,0,3094,0,0,0:-237.953,-194.617,-263.591,-244.876,-268.708,-318.967,0,-23.8474,-74.1035,-49.419,-244.876,-268.708,-318.967,-74.1035,-318.967,-244.876,-268.708,-318.967,-74.1035,-318.967,-318.967,-244.876,-268.708,-318.967,-74.1035,-318.967,-318.967,-318.967 1|1:168:10,28,0,116,0,1,0:10:394:28,0,116,0,1,0:1030,0,4373,0,29,0:-393.863,-318.402,-342.391,-396.874,-350.82,-429.291,-46.0387,0,-78.4631,-43.5436,-396.874,-350.82,-429.291,-78.4631,-429.291,-394.836,-348.782,-427.253,-76.4266,-427.253,-426.952,-396.874,-350.82,-429.291,-78.4631,-429.291,-427.253,-429.291 1|0:174:0,15,0,134,0,0,17:0:0:15,0,134,0,0,17:541,0,5048,0,0,667:-459.446,-417.599,-413.083,-459.446,-417.599,-459.446,-54.8782,-13.0356,-54.8782,-14.5402,-459.446,-417.599,-459.446,-54.8782,-459.446,-459.446,-417.599,-459.446,-54.8782,-459.446,-459.446,-404.592,-362.745,-404.592,0,-404.592,-404.592,-399.475 1|0:226:0,13,13,160,1,0,30:0:0:13,13,160,1,0,30:423,500,6024,19,0,1206:-589.861,-558.571,-554.658,-550.477,-519.188,-546.564,-99.3234,-68.0432,-59.9363,-51.1586,-588.721,-557.432,-549.337,-98.1858,-588.42,-589.861,-558.571,-550.477,-99.3234,-588.721,-589.861,-490.57,-459.281,-451.187,0,-489.431,-490.57,-481.54 dDocent_Contig_11113 19 . A T 43.6786 . AB=0.116279;ABP=58.0041;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=195;DPB=195;DPRA=1.48214;EPP=16.0391;EPPR=413.419;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.380952;PAO=0;PQA=0;PQR=0;PRO=0;QA=243;QR=7515;RO=189;RPL=0;RPP=16.0391;RPPR=413.419;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=189;SRP=413.419;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:953:0:0:0,-7.22472,-86.0715 0/0:38:38,0:38:1518:0:0:0,-11.4391,-136.866 0/1:43:38,5:38:1486:5:205:-5.89072,0,-121.037 0/0:40:39,1:39:1550:1:38:0,-8.24393,-135.936 0/0:20:20,0:20:813:0:0:0,-6.0206,-73.4852 0/0:30:30,0:30:1195:0:0:0,-9.0309,-107.822 dDocent_Contig_11114 12 . A G 1311.11 . AB=0.0393641;ABP=2437.64;AC=0;AF=0;AN=12;AO=67;CIGAR=1X3M1X;DP=2125;DPB=2125;DPRA=0;EPP=148.499;EPPR=3783.54;GTI=0;LEN=1;MEANALT=6.66667;MQM=56.1045;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.0447761;PAIREDR=0.0729466;PAO=0;PQA=0;PQR=0;PRO=0;QA=2610;QR=68442;RO=1741;RPL=0;RPP=148.499;RPPR=3783.54;RPR=67;RUN=1;SAF=67;SAP=148.499;SAR=0;SRF=1741;SRP=3783.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:375:295,33,41:295:11581:33,41:1270,1659:-47.987,-32.7115,-975.194,0,-848.346,-940.09 0|0:430:356,7,28:356:13991:7,28:281,1092:0,-84.0311,-1232.65,-17.4217,-1145.02,-1159.72 0|0:297:240,11,28:240:9418:11,28:436,1106:-18.7455,-55.2442,-826.437,0,-738.755,-766.075 0|0:292:244,4,27:244:9586:4,27:161,1089:-16.3165,-76.5146,-863.702,0,-775.142,-780.268 0|0:357:282,4,42:282:11167:4,42:160,1700:-55.2844,-127.112,-1044.98,0,-906.009,-906.428 0|0:374:324,8,25:324:12699:8,25:302,959:0,-72.9052,-1114.73,-18.8481,-1038.45,-1055.56 dDocent_Contig_11120 7 . T C 1976.34 . AB=0.57754;ABP=12.7761;AC=5;AF=0.5;AN=10;AO=108;CIGAR=1X3M1I1M2X;DP=187;DPB=203.143;DPRA=0;EPP=237.529;EPPR=161.528;GTI=0;LEN=1;MEANALT=1.8;MQM=27;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4185;QR=2803;RO=73;RPL=0;RPP=237.529;RPPR=161.528;RPR=108;RUN=1;SAF=108;SAP=237.529;SAR=0;SRF=73;SRP=161.528;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:54:13,38:13:496:38:1472:-75.9043,0,-29.3552 0|1:52:24,26:24:925:26:1010:-47.6087,0,-68.4024 0|1:42:21,21:21:815:21:796:-37.914,0,-61.0304 0|1:33:10,22:10:372:22:867:-43.5018,0,-24.0699 .:.:.:.:.:.:.:. 0|1:6:5,1:5:195:1:40:-0.872623,0,-16.1178 dDocent_Contig_11121 140 . A G 720.18 . AB=0.43;ABP=7.26639;AC=3;AF=0.25;AN=12;AO=43;CIGAR=1X;DP=188;DPB=188;DPRA=1.13636;EPP=96.3836;EPPR=317.874;GTI=0;LEN=1;MEANALT=1;MQM=29.3023;MQMR=24.1793;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1734;QR=5459;RO=145;RPL=43;RPP=96.3836;RPPR=317.874;RPR=0;RUN=1;SAF=0;SAP=96.3836;SAR=43;SRF=0;SRP=317.874;SRR=145;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1026:0:0:0,-8.12781,-62.0519 0/1:45:25,20:25:960:20:807:-26.8309,0,-54.736 0/1:21:14,7:14:508:7:286:-15.0081,0,-14.6132 0/1:34:18,16:18:675:16:641:-35.4009,0,-26.6829 0/0:18:18,0:18:659:0:0:0,-5.41854,-32.6062 0/0:43:43,0:43:1631:0:0:0,-12.9443,-67.8669 dDocent_Contig_11123 7 . T C 1415.52 . AB=0.516484;ABP=3.43982;AC=4;AF=0.5;AN=8;AO=94;CIGAR=1X3M1I1M2X4M3X;DP=182;DPB=190.143;DPRA=0;EPP=207.129;EPPR=172.385;GTI=0;LEN=1;MEANALT=1.75;MQM=26.6489;MQMR=60;NS=4;NUMALT=2;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2504;QR=3079;RO=78;RPL=0;RPP=207.129;RPPR=172.385;RPR=94;RUN=1;SAF=94;SAP=207.129;SAR=0;SRF=78;SRP=172.385;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:52:14,34,4:14:549:34,4:918,36:-59.1309,0,-35.1689,-62.3101,-44.4233,-106.298 0|1:72:36,33,3:36:1416:33,3:890,27:-50.606,0,-106.85,-60.6674,-116.019,-176.323 0|1:18:9,9,0:9:359:9,0:243,0:-14.2566,0,-27.2557,-16.9658,-29.965,-46.6116 0|1:40:19,18,3:19:755:18,3:453,27:-24.9566,0,-57.0305,-29.9086,-61.7042,-91.2557 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_11124 7 . T C 1555.01 . AB=0.442211;ABP=8.78271;AC=6;AF=0.5;AN=12;AO=88;CIGAR=1X3M1I1M2X4M3X4M2X1M1D3M1X1M;DP=199;DPB=198.259;DPRA=0;EPP=194.1;EPPR=152;GTI=0;LEN=1;MEANALT=1.83333;MQM=31.3068;MQMR=58.0102;NS=6;NUMALT=3;ODDS=0;PAIRED=0.75;PAIREDR=0.653061;PAO=0;PQA=0;PQR=0;PRO=0;QA=2722;QR=3808;RO=98;RPL=0;RPP=194.1;RPPR=215.815;RPR=88;RUN=1;SAF=88;SAP=194.1;SAR=0;SRF=90;SRP=152;SRR=8;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:30:20,10,0,0:20:792:10,0,0:278,0,0:-13.4202,0,-61.232,-19.4408,-64.2423,-83.6855,-19.4408,-64.2423,-83.6855,-83.6855 0|1:30:17,11,0,1:17:662:11,0,1:314,0,37:-16.7796,0,-49.1523,-21.8971,-52.4636,-74.4133,-19.1335,-49.7075,-71.655,-71.3539 0|1:29:7,18,4,0:7:265:18,4,0:594,51,0:-41.2184,0,-16.4654,-39.9855,-18.6038,-60.5275,-43.3256,-21.884,-61.7316,-65.0762 0|1:50:24,19,0,5:24:928:19,0,5:597,0,139:-35.977,0,-70.6229,-43.2017,-76.3425,-119.464,-33.4986,-66.6542,-109.765,-108.26 0|1:22:12,10,0,0:12:468:10,0,0:248,0,0:-13.474,0,-34.9059,-17.0863,-37.9162,-54.7089,-17.0863,-37.9162,-54.7089,-54.7089 0|1:38:18,20,0,0:18:693:20,0,0:691,0,0:-45.8539,0,-49.4618,-51.2724,-55.4824,-106.408,-51.2724,-55.4824,-106.408,-106.408 dDocent_Contig_11125 30 . G T 264.21 . AB=0.265306;ABP=26.4533;AC=3;AF=0.25;AN=12;AO=14;CIGAR=1X;DP=182;DPB=182;DPRA=1.125;EPP=5.49198;EPPR=182.984;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.285714;PAIREDR=0.785714;PAO=0;PQA=0;PQR=0;PRO=0;QA=543;QR=6602;RO=168;RPL=0;RPP=33.4109;RPPR=367.818;RPR=14;RUN=1;SAF=5;SAP=5.49198;SAR=9;SRF=143;SRP=182.984;SRR=25;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:21,5:21:843:5:196:-10.1863,0,-68.3566 0/0:77:76,1:76:2974:1:40:0,-19.1836,-263.774 0/0:28:28,0:28:1113:0:0:0,-8.42884,-100.454 0/0:28:28,0:28:1105:0:0:0,-8.42884,-99.7287 0/1:8:6,2:6:225:2:81:-5.27749,0,-18.1948 0/1:15:9,6:9:342:6:226:-16.1791,0,-26.6118 dDocent_Contig_11126 24 . A T 981.145 . AB=0.261146;ABP=80.8099;AC=2;AF=0.166667;AN=12;AO=45;CIGAR=1X;DP=326;DPB=326;DPRA=1.96364;EPP=100.727;EPPR=611.023;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1805;QR=11175;RO=280;RPL=0;RPP=100.727;RPPR=611.023;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=280;SRP=611.023;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:20,0:20:811:0:0:0,-6.0206,-72.8953 0/1:93:58,35:58:2309:35:1402:-98.4357,0,-179.973 0/0:59:55,4:55:2188:4:161:0,-2.88587,-182.216 0/0:69:69,0:69:2745:0:0:0,-20.7711,-247.155 0/0:20:20,0:20:803:0:0:0,-6.0206,-72.5856 0/1:64:58,6:58:2319:6:242:-2.8914,0,-189.602 dDocent_Contig_11127 16 . A G 1418 . AB=0.432203;ABP=7.72129;AC=4;AF=0.5;AN=8;AO=51;CIGAR=1X;DP=118;DPB=118;DPRA=0;EPP=105.24;EPPR=148.499;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=0.941176;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2037;QR=2663;RO=67;RPL=0;RPP=113.755;RPPR=148.499;RPR=51;RUN=1;SAF=50;SAP=105.24;SAR=1;SRF=67;SRP=148.499;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:22,20:22:872:20:791:-58.8611,0,-66.147 0/1:14:10,4:10:403:4:161:-10.6609,0,-32.4151 0/1:42:25,17:25:989:17:679:-48.7959,0,-76.6669 0/1:20:10,10:10:399:10:406:-30.88,0,-30.2493 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11128 20 . A T 42.2967 . AB=0.133333;ABP=38.0434;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=172;DPB=172;DPRA=1.04425;EPP=13.8677;EPPR=365.646;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.6;PAIREDR=0.60479;PAO=0;PQA=0;PQR=0;PRO=0;QA=201;QR=6671;RO=167;RPL=0;RPP=13.8677;RPPR=365.646;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=167;SRP=365.646;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1065:0:0:0,-8.12781,-96.1402 0/0:26:26,0:26:1045:0:0:0,-7.82678,-94.3419 0/1:30:26,4:26:1046:4:160:-5.75253,0,-85.4021 0/0:29:28,1:28:1097:1:41:0,-4.6353,-94.912 0/0:36:36,0:36:1453:0:0:0,-10.8371,-131.016 0/0:24:24,0:24:965:0:0:0,-7.22472,-87.1507 dDocent_Contig_11129 32 . A G 445.799 . AB=0.283582;ABP=30.2671;AC=2;AF=0.166667;AN=12;AO=21;CIGAR=1X;DP=197;DPB=197;DPRA=1.18889;EPP=48.6112;EPPR=385.189;GTI=0;LEN=1;MEANALT=1;MQM=46.8571;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.920455;PAO=0;PQA=0;PQR=0;PRO=0;QA=832;QR=6988;RO=176;RPL=0;RPP=48.6112;RPPR=385.189;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=176;SRP=385.189;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:38,2:38:1492:2:70:0,-5.53251,-128.011 0/1:65:47,18:47:1865:18:721:-44.3207,0,-148.494 0/0:42:42,0:42:1698:0:0:0,-12.6433,-153.04 0/0:44:44,0:44:1738:0:0:0,-13.2453,-156.633 0/1:2:1,1:1:36:1:41:-3.47137,0,-2.99621 0/0:4:4,0:4:159:0:0:0,-1.20412,-14.692 dDocent_Contig_11130 12 . C T 1868.84 . AB=0.200893;ABP=351.144;AC=2;AF=0.166667;AN=12;AO=102;CIGAR=2X;DP=1081;DPB=1081;DPRA=2.31395;EPP=224.5;EPPR=2122.37;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.980392;PAIREDR=0.984631;PAO=0;PQA=0;PQR=0;PRO=0;QA=4064;QR=38840;RO=976;RPL=0;RPP=224.5;RPPR=2122.37;RPR=102;RUN=1;SAF=102;SAP=224.5;SAR=0;SRF=976;SRP=2122.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:189:184,5:184:7303:5:187:0,-39.7053,-639.739 0|0:198:192,6:192:7647:6:230:0,-38.5407,-666.785 0|0:86:86,0:86:3441:0:0:0,-25.8886,-309.729 0|0:160:156,1:156:6169:1:41:0,-43.5658,-550.927 0|1:228:187,41:187:7452:41:1643:-79.4668,0,-601.673 0|1:220:171,49:171:6828:49:1963:-110.639,0,-547.98 dDocent_Contig_11131 28 . G T 45.8611 . AB=0.101266;ABP=112.106;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=350;DPB=350;DPRA=1.20126;EPP=35.5824;EPPR=730.454;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=609;QR=13206;RO=335;RPL=0;RPP=35.5824;RPPR=730.454;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=335;SRP=730.454;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:56:53,3:53:2107:3:119:0,-5.76267,-178.722 0/0:56:52,4:52:2067:4:162:0,-1.89072,-171.249 0/1:79:71,8:71:2830:8:328:-6.10897,0,-231.019 0/0:36:36,0:36:1355:0:0:0,-10.8371,-122.199 0/0:74:74,0:74:2944:0:0:0,-22.2762,-265.053 0/0:49:49,0:49:1903:0:0:0,-14.7505,-171.471 dDocent_Contig_11133 58 . A C 40.136 . AB=0.142857;ABP=34.0313;AC=1;AF=0.125;AN=8;AO=4;CIGAR=1X;DP=152;DPB=152;DPRA=0.677419;EPP=11.6962;EPPR=324.388;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=153;QR=5588;RO=148;RPL=4;RPP=11.6962;RPPR=324.388;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=148;SRP=324.388;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:70:70,0:70:2572:0:0:0,-21.0721,-231.681 0/1:28:24,4:24:892:4:153:-5.71253,0,-72.1633 0/0:16:16,0:16:630:0:0:0,-4.81648,-57.0326 0/0:38:38,0:38:1494:0:0:0,-11.4391,-134.705 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11134 41 . C A 137.727 . AB=0.183673;ABP=45.5977;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=242;DPB=242;DPRA=1.26943;EPP=22.5536;EPPR=500.315;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.991416;PAO=0;PQA=0;PQR=0;PRO=0;QA=330;QR=9143;RO=233;RPL=0;RPP=22.5536;RPPR=500.315;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=233;SRP=508.963;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:13:13,0:13:500:0:0:0,-3.91339,-45.3342 0/0:48:48,0:48:1876:0:0:0,-14.4494,-169.042 0/0:66:66,0:66:2627:0:0:0,-19.868,-236.561 0/0:65:65,0:65:2545:0:0:0,-19.5669,-229.193 0/0:1:1,0:1:25:0:0:0,-0.30103,-2.49986 0/1:49:40,9:40:1570:9:330:-15.2949,0,-126.794 dDocent_Contig_11135 1 . N G 77.8076 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_11136 7 . T C 4018.69 . AB=0.409091;ABP=29.8576;AC=6;AF=0.5;AN=12;AO=153;CIGAR=1M1X1M;DP=374;DPB=358;DPRA=0;EPP=231.923;EPPR=378.675;GTI=0;LEN=1;MEANALT=2;MQM=54.0523;MQMR=59.3468;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.560694;PAO=0;PQA=0;PQR=0;PRO=0;QA=5764;QR=6600;RO=173;RPL=0;RPP=335.246;RPPR=378.675;RPR=153;RUN=1;SAF=140;SAP=231.923;SAR=13;SRF=173;SRP=378.675;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:50:40,2,8:40:1537:2,8:58,308:-12.9174,-20.3617,-145.907,0,-121.623,-123.825 0|1:86:36,10,40:36:1360:10,40:381,1517:-112.433,-92.0283,-200.454,0,-80.1915,-99.3918 0|1:49:25,8,16:25:955:8,16:309,572:-38.7808,-20.9426,-96.9089,0,-53.0007,-73.5389 0|1:85:34,11,40:34:1307:11,40:428,1524:-109.993,-85.0815,-188.788,0,-71.8631,-94.9654 0|1:50:22,6,22:22:834:6,22:231,824:-60.7594,-48.4301,-114.421,0,-48.8381,-61.1669 0|1:54:16,11,27:16:607:11,27:417,1019:-78.2073,-49.3385,-95.8017,0,-16.0927,-41.6484 dDocent_Contig_11137 18 . G T 844.264 . AB=0.170213;ABP=269.408;AC=1;AF=0.0833333;AN=12;AO=48;CIGAR=1X;DP=1500;DPB=1500;DPRA=1.15764;EPP=107.241;EPPR=3155.99;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997245;PAO=0;PQA=0;PQR=0;PRO=0;QA=1896;QR=58012;RO=1452;RPL=0;RPP=107.241;RPPR=3155.99;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=1452;SRP=3155.99;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:243:243,0:243:9682:0:0:0,-73.1503,-870.783 0/0:273:273,0:273:10924:0:0:0,-82.1812,-982.416 0/0:172:172,0:172:6890:0:0:0,-51.7772,-619.753 0/0:190:190,0:190:7552:0:0:0,-57.1957,-679.303 0/0:340:340,0:340:13632:0:0:0,-102.35,-1225.83 0/1:282:234,48:234:9332:48:1896:-85.9493,0,-754.415 dDocent_Contig_11138 28 . A G 316.771 . AB=0.267857;ABP=29.2231;AC=2;AF=0.25;AN=8;AO=15;CIGAR=1X1M1X;DP=107;DPB=107;DPRA=1.09804;EPP=35.5824;EPPR=202.786;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=569;QR=3658;RO=92;RPL=0;RPP=35.5824;RPPR=202.786;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=92;SRP=202.786;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:30:25,5:25:987:5:194:-8.80148,0,-80.0998 0|0:37:37,0:37:1463:0:0:0,-11.1381,-131.927 0|0:14:14,0:14:568:0:0:0,-4.21442,-51.4622 0|1:26:16,10:16:640:10:375:-26.2736,0,-50.1087 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_11139 9 . T G 3247.21 . AB=0.396226;ABP=32.7554;AC=6;AF=0.5;AN=12;AO=126;CIGAR=1X;DP=318;DPB=318;DPRA=0;EPP=276.616;EPPR=419.933;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.563492;PAIREDR=0.598958;PAO=0;PQA=0;PQR=0;PRO=0;QA=4775;QR=7398;RO=192;RPL=0;RPP=276.616;RPPR=419.933;RPR=126;RUN=1;SAF=126;SAP=276.616;SAR=0;SRF=192;SRP=419.933;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:23,8:23:895:8:307:-18.6593,0,-71.5369 0/1:78:41,37:41:1579:37:1405:-103.252,0,-118.899 0/1:25:19,6:19:738:6:213:-11.9861,0,-59.2254 0/1:68:43,25:43:1653:25:957:-65.9739,0,-128.564 0/1:65:41,24:41:1575:24:915:-63.0976,0,-122.448 0/1:51:25,26:25:958:26:978:-72.9738,0,-71.1825 dDocent_Contig_11140 25 . T A 1176.09 . AB=0.263959;ABP=98.3457;AC=6;AF=0.5;AN=12;AO=52;CIGAR=1X;DP=197;DPB=197;DPRA=0;EPP=115.927;EPPR=317.874;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.826923;PAIREDR=0.903448;PAO=0;PQA=0;PQR=0;PRO=0;QA=2066;QR=5791;RO=145;RPL=0;RPP=115.927;RPPR=317.874;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=145;SRP=317.874;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:22,8:22:862:8:324:-20.4985,0,-68.858 0/1:39:23,16:23:930:16:621:-44.4851,0,-72.2637 0/1:17:13,4:13:521:4:159:-9.57444,0,-42.1184 0/1:29:25,4:25:1000:4:163:-6.32856,0,-81.5661 0/1:34:24,10:24:964:10:401:-26.2149,0,-76.8254 0/1:48:38,10:38:1514:10:398:-21.7293,0,-122.053 dDocent_Contig_11141 39 . C T 115.635 . AB=0.194444;ABP=32.2045;AC=2;AF=0.2;AN=10;AO=7;CIGAR=1X;DP=88;DPB=88;DPRA=1.03846;EPP=18.2106;EPPR=174.557;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.987342;PAO=0;PQA=0;PQR=0;PRO=0;QA=277;QR=3099;RO=79;RPL=0;RPP=18.2106;RPPR=174.557;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=79;SRP=174.557;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:32,0:32:1271:0:0:0,-9.63296,-114.476 0/1:23:18,5:18:722:5:204:-11.8203,0,-58.3831 0/0:16:16,0:16:604:0:0:0,-4.81648,-54.6792 0/1:13:10,2:10:394:2:73:-3.03614,0,-31.9502 ./.:.:.:.:.:.:.:. 0/0:3:3,0:3:108:0:0:0,-0.90309,-10.0734 dDocent_Contig_11142 18 . T G 253.408 . AB=0.297297;ABP=16.2152;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=133;DPB=133;DPRA=0.770833;EPP=26.8965;EPPR=267.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=432;QR=4876;RO=122;RPL=0;RPP=26.8965;RPPR=267.93;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=122;SRP=267.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:18,2:18:730:2:81:-1.66513,0,-60.0037 0/0:15:15,0:15:613:0:0:0,-4.51545,-55.5068 0/0:35:35,0:35:1393:0:0:0,-10.536,-125.62 0/0:29:29,0:29:1140:0:0:0,-8.72987,-102.871 0/1:17:8,9:8:323:9:351:-26.8314,0,-24.3211 0/0:17:17,0:17:677:0:0:0,-5.11751,-61.2534 dDocent_Contig_11144 8 . A T 289.356 . AB=0.207317;ABP=64.0234;AC=3;AF=0.25;AN=12;AO=21;CIGAR=1X;DP=262;DPB=262;DPRA=1.29714;EPP=48.6112;EPPR=526.335;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.142857;PAIREDR=0.813278;PAO=0;PQA=0;PQR=0;PRO=0;QA=798;QR=9193;RO=241;RPL=0;RPP=48.6112;RPPR=526.335;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=241;SRP=526.335;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:56:54,2:54:2041:2:78:0,-9.45421,-176.522 0/1:52:43,9:43:1625:9:350:-16.2078,0,-130.86 0/0:35:35,0:35:1338:0:0:0,-10.536,-120.708 0/0:89:87,2:87:3342:2:78:0,-19.3882,-293.51 0/1:10:5,5:5:194:5:195:-14.9139,0,-14.8225 0/1:20:17,3:17:653:3:97:-3.02904,0,-53.086 dDocent_Contig_11145 24 . A C 32.7792 . AB=0.136364;ABP=53.5464;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=146;DPB=146;DPRA=2.15686;EPP=16.0391;EPPR=298.393;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=33.3214;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.421429;PAO=0;PQA=0;PQR=0;PRO=0;QA=197;QR=5481;RO=140;RPL=0;RPP=16.0391;RPPR=307.016;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=139;SRP=298.393;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:570:0:0:0,-4.51545,-32.3189 0/0:32:32,0:32:1239:0:0:0,-9.63296,-68.9767 0/0:21:21,0:21:831:0:0:0,-6.32163,-59.8141 0/0:22:22,0:22:871:0:0:0,-6.62266,-57.2793 0/0:12:12,0:12:473:0:0:0,-3.61236,-13.9614 0/1:44:38,6:38:1497:6:197:-4.80057,0,-61.6059 dDocent_Contig_11146 9 . G A 250.285 . AB=0.126316;ABP=233.461;AC=1;AF=0.0833333;AN=12;AO=29;CIGAR=1X;DP=727;DPB=727;DPRA=2.64537;EPP=65.983;EPPR=1518.7;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9828;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992837;PAO=0;PQA=0;PQR=0;PRO=0;QA=1120;QR=26755;RO=698;RPL=0;RPP=65.983;RPPR=1518.7;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=698;SRP=1518.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:98:98,0:98:3738:0:0:0,-29.5009,-336.532 0/0:53:53,0:53:2047:0:0:0,-15.9546,-184.462 0/0:47:47,0:47:1792:0:0:0,-14.1484,-161.529 0/0:115:115,0:115:4413:0:0:0,-34.6184,-397.186 0/1:190:166,24:166:6344:24:927:-26.5513,0,-513.689 0/0:224:219,5:219:8421:5:193:0,-49.6894,-739.907 dDocent_Contig_11148 191 . C T 2702.79 . AB=0.478947;ABP=3.74174;AC=6;AF=0.5;AN=12;AO=92;CIGAR=1X;DP=203;DPB=203;DPRA=3.18333;EPP=202.786;EPPR=244.044;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3701;QR=4392;RO=111;RPL=92;RPP=202.786;RPPR=244.044;RPR=0;RUN=1;SAF=0;SAP=202.786;SAR=92;SRF=0;SRP=244.044;SRR=111;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:58:30,28:30:1193:28:1117:-83.355,0,-90.185 0/1:24:4,20:4:161:20:807:-65.7196,0,-7.65076 0/1:63:34,29:34:1327:29:1169:-86.5244,0,-100.716 0/1:45:31,14:31:1230:14:569:-38.005,0,-97.4254 0/0:12:12,0:12:481:0:0:0,-3.61236,-43.6377 1/1:1:0,1:0:0:1:39:-3.89656,-0.30103,0 dDocent_Contig_11149 176 . C A 282.575 . AB=0.108108;ABP=52.3673;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=9M1X3M;DP=88;DPB=85.4615;DPRA=5.28571;EPP=11.6962;EPPR=152.842;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=156;QR=2654;RO=69;RPL=4;RPP=11.6962;RPPR=152.842;RPR=0;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=152.842;SRR=69;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:5:5,0,0,0,0:5:187:0,0,0,0:0,0,0,0:0,-1.50515,-17.1916,-1.50515,-17.1916,-17.1916,-1.50515,-17.1916,-17.1916,-17.1916,-1.50515,-17.1916,-17.1916,-17.1916,-17.1916 0|0:9:5,0,0,3,0:5:198:0,0,3,0:0,0,119,0:-8.28011,-9.78526,-26.0801,-9.78526,-26.0801,-26.0801,0,-16.2855,-16.2855,-15.3824,-9.78526,-26.0801,-26.0801,-16.2855,-26.0801 0|1:37:31,0,0,1,4:31:1213:0,0,1,4:0,0,41,156:-3.48168,-12.8136,-112.541,-12.8136,-112.541,-112.541,-9.42656,-109.157,-109.157,-108.856,0,-99.7181,-99.7181,-96.3335,-98.514 0|0:9:9,0,0,0,0:9:341:0,0,0,0:0,0,0,0:0,-2.70927,-31.0442,-2.70927,-31.0442,-31.0442,-2.70927,-31.0442,-31.0442,-31.0442,-2.70927,-31.0442,-31.0442,-31.0442,-31.0442 0|0:15:9,0,6,0,0:9:333:0,6,0,0:0,239,0,0:-17.3684,-20.0777,-47.2981,0,-27.607,-25.8008,-20.0777,-47.2981,-27.607,-47.2981,-20.0777,-47.2981,-27.607,-47.2981,-47.2981 0|0:13:10,3,0,0,0:10:382:3,0,0,0:110,0,0,0:-6.34662,0,-30.8202,-9.35692,-31.7233,-40.7103,-9.35692,-31.7233,-40.7103,-40.7103,-9.35692,-31.7233,-40.7103,-40.7103,-40.7103 dDocent_Contig_11150 24 . A T 144.997 . AB=0.166667;ABP=60.9162;AC=1;AF=0.0833333;AN=12;AO=38;CIGAR=1X;DP=1135;DPB=1135;DPRA=1.00176;EPP=85.5263;EPPR=2382.94;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.992701;PAO=0;PQA=0;PQR=0;PRO=0;QA=1490;QR=43443;RO=1096;RPL=0;RPP=85.5263;RPPR=2382.94;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=1096;SRP=2382.94;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:126:126,0:126:4993:0:0:0,-37.9298,-449.268 0/1:60:50,10:50:2013:10:375:-16.0225,0,-163.296 0/0:95:88,6:88:3447:6:235:0,-7.13531,-288.751 0/0:71:71,0:71:2777:0:0:0,-21.3731,-250.047 0/0:370:370,0:370:14659:0:0:0,-111.381,-1318.25 0/0:413:391,22:391:15554:22:880:0,-44.818,-1319.17 dDocent_Contig_11151 9 . G A 261.394 . AB=0.208955;ABP=52.306;AC=1;AF=0.0833333;AN=12;AO=31;CIGAR=1X;DP=467;DPB=467;DPRA=1.62273;EPP=70.3259;EPPR=949.772;GTI=0;LEN=1;MEANALT=1;MQM=48.3871;MQMR=56.617;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.291284;PAO=0;PQA=0;PQR=0;PRO=0;QA=1176;QR=16651;RO=436;RPL=0;RPP=70.3259;RPPR=949.772;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=436;SRP=949.772;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:67:53,14:53:2016:14:540:-27.3612,0,-160.521 0/0:100:96,4:96:3685:4:153:0,-16.035,-315.959 0/0:59:57,2:57:2186:2:77:0,-10.4736,-186.988 0/0:131:120,11:120:4562:11:406:0,-3.18401,-371.258 0/0:60:60,0:60:2287:0:0:0,-18.0618,-202.77 0/0:50:50,0:50:1915:0:0:0,-15.0515,-170.874 dDocent_Contig_11152 28 . T G 70.8728 . AB=0.14;ABP=59.2949;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=216;DPB=216;DPRA=1.34783;EPP=29.068;EPPR=445.991;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=452;QR=8170;RO=204;RPL=0;RPP=29.068;RPPR=445.991;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=204;SRP=445.991;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:37,0:37:1466:0:0:0,-11.1381,-132.184 0/1:50:43,7:43:1738:7:259:-8.61007,0,-141.585 0/0:39:36,3:36:1434:3:116:0,-0.923149,-118.496 0/0:35:33,2:33:1325:2:77:0,-3.22785,-112.204 0/0:26:26,0:26:1036:0:0:0,-7.82678,-93.5323 0/0:29:29,0:29:1171:0:0:0,-8.72987,-105.666 dDocent_Contig_11153 7 . T A 3583.17 . AB=0.324385;ABP=122.752;AC=5;AF=0.416667;AN=12;AO=148;CIGAR=1X2M;DP=527;DPB=527;DPRA=0;EPP=324.388;EPPR=804.284;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5665;QR=14036;RO=369;RPL=0;RPP=324.388;RPPR=804.284;RPR=148;RUN=1;SAF=148;SAP=324.388;SAR=0;SRF=369;SRP=804.284;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:95:69,0,26:69:2610:0,26:0,981:-59.9991,-80.7702,-294.725,0,-214.332,-206.505 0|0:80:75,2,3:75:2843:2,3:68,117:0,-17.0817,-249.567,-12.9297,-240.551,-245.162 0|1:127:84,2,41:84:3223:2,41:77,1573:-103.827,-122.791,-386.744,0,-258.232,-252.212 0|1:79:52,1,26:52:1968:1,26:38,1003:-66.7214,-79.2586,-240.289,0,-158.218,-153.508 0|1:67:41,5,21:41:1566:5,21:187,809:-54.0959,-51.1273,-178.106,0,-113.181,-122.172 0|1:79:48,0,31:48:1826:0,31:0,1182:-82.896,-97.3454,-247.11,0,-150.145,-140.813 dDocent_Contig_11155 9 . G A 362.125 . AB=0.246753;ABP=45.9039;AC=5;AF=0.416667;AN=12;AO=19;CIGAR=1X;DP=85;DPB=85;DPRA=1.925;EPP=44.2683;EPPR=146.327;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.878788;PAO=0;PQA=0;PQR=0;PRO=0;QA=726;QR=2551;RO=66;RPL=0;RPP=44.2683;RPPR=146.327;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=66;SRP=146.327;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:14,6:14:540:6:231:-15.1373,0,-42.9246 0/0:8:8,0:8:303:0:0:0,-2.40824,-27.6273 0/1:11:10,1:10:383:1:39:-0.585235,0,-31.5145 0/1:6:4,2:4:156:2:74:-5.21925,0,-12.6111 0/1:28:21,7:21:819:7:268:-16.0551,0,-65.5985 0/1:12:9,3:9:350:3:114:-7.01986,0,-28.2445 dDocent_Contig_11156 39 . T A 1671.94 . AB=0.0566038;ABP=93.5156;AC=4;AF=0.333333;AN=12;AO=23;CIGAR=1M1I2M1X4M;DP=92;DPB=99;DPRA=1.92105;EPP=52.9542;EPPR=81.1833;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.956522;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=875;QR=1411;RO=36;RPL=0;RPP=52.9542;RPPR=81.1833;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=36;SRP=81.1833;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:11:10,0,1,0:10:390:0,1,0:0,41,0:-0.783237,-3.79354,-35.8312,0,-32.4453,-32.1442,-3.79354,-35.8312,-32.4453,-35.8312 0|0:9:9,0,0,0:9:356:0,0,0:0,0,0:0,-2.70927,-32.4034,-2.70927,-32.4034,-32.4034,-2.70927,-32.4034,-32.4034,-32.4034 1|0:16:0,11,1,4:0:0:11,1,4:439,39,155:-48.8962,-12.732,-9.42066,-45.6907,-9.52562,-45.3897,-36.1649,0,-32.9598,-34.9608 0|0:26:7,0,1,18:7:272:0,1,18:0,40,676:-53.2447,-55.3519,-77.7059,-52.0555,-74.4101,-74.109,0,-22.341,-19.0445,-16.9225 0|0:10:10,0,0,0:10:393:0,0,0:0,0,0:0,-3.0103,-35.7285,-3.0103,-35.7285,-35.7285,-3.0103,-35.7285,-35.7285,-35.7285 1|1:20:0,0,20,0:0:0:0,20,0:0,755,0:-68.2702,-68.2702,-68.2702,-6.0206,-6.0206,0,-68.2702,-68.2702,-6.0206,-68.2702 dDocent_Contig_11157 7 . T C 9764.09 . AB=0.681548;ABP=99.2014;AC=7;AF=0.583333;AN=12;AO=316;CIGAR=1X;DP=424;DPB=424;DPRA=0;EPP=689.196;EPPR=237.529;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.968354;PAIREDR=0.953704;PAO=0;PQA=0;PQR=0;PRO=0;QA=12103;QR=4106;RO=108;RPL=0;RPP=689.196;RPPR=237.529;RPR=316;RUN=1;SAF=316;SAP=689.196;SAR=0;SRF=108;SRP=237.529;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:48:22,26:22:832:26:983:-74.3281,0,-60.7519 0/1:66:24,42:24:899:42:1604:-124.758,0,-61.3579 0/1:47:14,33:14:535:33:1280:-101.341,0,-34.3455 0/1:90:27,63:27:1028:63:2415:-190.464,0,-65.7374 0/1:85:20,65:20:773:65:2494:-199.072,0,-44.3104 1/1:88:1,87:1:39:87:3327:-295.668,-22.5941,0 dDocent_Contig_11159 1 . N G 144.17 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=7.37776;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=156;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:156:-14.4167,-1.20412,0 dDocent_Contig_11160 21 . T G 51.5253 . AB=0.112903;ABP=83.705;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=577;DPB=577;DPRA=0.593258;EPP=24.725;EPPR=1232.06;GTI=0;LEN=1;MEANALT=1;MQM=48;MQMR=59.4823;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0;PAIREDR=0.908127;PAO=0;PQA=0;PQR=0;PRO=0;QA=401;QR=22558;RO=566;RPL=0;RPP=24.725;RPPR=1232.06;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=566;SRP=1232.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:63:63,0:63:2515:0:0:0,-18.9649,-225.548 0/1:62:55,7:55:2210:7:282:-6.67541,0,-180.338 0/0:23:23,0:23:922:0:0:0,-6.92369,-82.4314 0/0:70:67,3:67:2670:3:119:0,-10.1374,-227.665 0/0:179:179,0:179:7141:0:0:0,-53.8844,-642.333 0/0:180:179,0:179:7100:0:0:0,-53.8844,-637.967 dDocent_Contig_11161 113 . C G 3927.19 . AB=0.541045;ABP=6.93191;AC=7;AF=0.583333;AN=12;AO=158;CIGAR=1X;DP=281;DPB=281;DPRA=0;EPP=346.103;EPPR=270.101;GTI=0;LEN=1;MEANALT=1;MQM=59.5063;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.537975;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5342;QR=4082;RO=123;RPL=0;RPP=346.103;RPPR=270.101;RPR=158;RUN=1;SAF=0;SAP=346.103;SAR=158;SRF=0;SRP=270.101;SRR=123;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:10,32:10:322:32:1084:-85.2198,0,-16.649 0/1:59:21,38:21:672:38:1306:-100.079,0,-43.0215 0/1:55:47,8:47:1564:8:280:-8.98334,0,-124.488 0/1:99:43,56:43:1454:56:1868:-138.584,0,-101.349 1/1:13:0,13:0:0:13:448:-40.635,-3.91339,0 0/1:13:2,11:2:70:11:356:-28.4276,0,-2.73401 dDocent_Contig_11162 24 . G C 438.674 . AB=0.246914;ABP=48.0751;AC=4;AF=0.333333;AN=12;AO=20;CIGAR=1X;DP=116;DPB=116;DPRA=1.15714;EPP=30.8051;EPPR=202.876;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.979167;PAO=0;PQA=0;PQR=0;PRO=0;QA=813;QR=3789;RO=96;RPL=4;RPP=18.6449;RPPR=194.462;RPR=16;RUN=1;SAF=18;SAP=30.8051;SAR=2;SRF=95;SRP=202.876;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:44:40,4:40:1556:4:161:-1.62995,0,-127.031 0/1:24:19,5:19:750:5:205:-11.6103,0,-60.596 0/0:20:20,0:20:811:0:0:0,-6.0206,-73.3051 0/0:15:15,0:15:592:0:0:0,-4.51545,-53.6167 0/1:8:1,7:1:41:7:284:-23.5258,0,-1.68633 0/1:5:1,4:1:39:4:163:-13.5533,0,-2.39141 dDocent_Contig_11163 18 . T C 3403.71 . AB=0.346154;ABP=77.8426;AC=3;AF=0.25;AN=12;AO=126;CIGAR=1X;DP=563;DPB=563;DPRA=1.82915;EPP=276.616;EPPR=951.944;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5050;QR=17361;RO=437;RPL=0;RPP=276.616;RPPR=951.944;RPR=126;RUN=1;SAF=126;SAP=276.616;SAR=0;SRF=437;SRP=951.944;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:96:96,0:96:3814:0:0:0,-28.8989,-343.262 0/1:70:58,12:58:2328:12:488:-23.1983,0,-188.603 0/0:55:55,0:55:2220:0:0:0,-16.5566,-199.962 0/1:190:159,31:159:6263:31:1249:-55.4821,0,-506.246 0/0:48:48,0:48:1901:0:0:0,-14.4494,-171.293 0/1:104:21,83:21:835:83:3313:-266.913,0,-44.1555 dDocent_Contig_11164 23 . C T 12781.7 . AB=0.120879;ABP=116.619;AC=0;AF=0;AN=12;AO=11;CIGAR=2X;DP=817;DPB=817;DPRA=0.572327;EPP=26.8965;EPPR=845.542;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=59.9923;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.430412;PAO=0;PQA=0;PQR=0;PRO=0;QA=438;QR=15447;RO=388;RPL=0;RPP=26.8965;RPPR=845.542;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=388;SRP=845.542;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:91:54,11,26:54:2164:11,26:438,1057:-70.9347,-51.1275,-226.096,0,-142.221,-170.459 0|0:164:115,0,48:115:4526:0,48:0,1928:-124.541,-159.16,-531.439,0,-372.571,-358.122 0|0:126:66,0,60:66:2648:0,60:0,2399:-178.124,-197.992,-416.17,0,-218.578,-200.516 0|0:165:106,0,58:106:4226:0,58:0,2326:-159.724,-191.633,-539.627,0,-347.994,-330.534 0|0:159:0,0,159:0:0:0,159:0,6267:-563.764,-563.764,-563.764,-47.8638,-47.8638,0 0|0:112:47,0,62:47:1883:0,62:0,2482:-190.303,-204.451,-359.568,0,-155.112,-136.448 dDocent_Contig_11166 18 . T C 8741.42 . AB=0.554054;ABP=16.1565;AC=6;AF=0.5;AN=12;AO=287;CIGAR=1X;DP=518;DPB=518;DPRA=0;EPP=626.223;EPPR=504.62;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.972125;PAIREDR=0.987013;PAO=0;PQA=0;PQR=0;PRO=0;QA=11557;QR=9316;RO=231;RPL=0;RPP=626.223;RPPR=504.62;RPR=287;RUN=1;SAF=287;SAP=626.223;SAR=0;SRF=231;SRP=504.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:67:32,35:32:1286:35:1404:-106.444,0,-95.8339 0/1:107:43,64:43:1737:64:2564:-198.675,0,-124.333 0/1:73:37,36:37:1498:36:1457:-109.399,0,-113.084 0/1:99:49,50:49:1973:50:2009:-151.196,0,-147.957 0/1:70:31,39:31:1258:39:1573:-120.731,0,-92.4137 0/1:102:39,63:39:1564:63:2550:-198.919,0,-110.283 dDocent_Contig_11167 23 . T C 21279.3 . AB=0.667382;ABP=116.411;AC=8;AF=0.666667;AN=12;AO=639;CIGAR=1X;DP=804;DPB=804;DPRA=0;EPP=1390.58;EPPR=361.303;GTI=0;LEN=1;MEANALT=1;MQM=59.8826;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0;PAIREDR=0.50303;PAO=0;PQA=0;PQR=0;PRO=0;QA=25685;QR=6531;RO=165;RPL=0;RPP=1390.58;RPPR=361.303;RPR=639;RUN=1;SAF=639;SAP=1390.58;SAR=0;SRF=165;SRP=361.303;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:129:39,90:39:1528:90:3622:-287.092,0,-98.9295 0/1:134:51,83:51:2036:83:3317:-258.044,0,-143.086 0/1:82:28,54:28:1103:54:2185:-172.127,0,-74.8645 0/1:121:37,84:37:1478:84:3408:-270.215,0,-96.8439 1/1:147:7,140:7:278:140:5653:-483.155,-18.8616,0 1/1:191:3,188:3:108:188:7500:-664.517,-47.423,0 dDocent_Contig_11168 184 . C T 203.841 . AB=0.107595;ABP=214.33;AC=6;AF=0.5;AN=12;AO=23;CIGAR=1X;DP=205;DPB=205;DPRA=0;EPP=52.9542;EPPR=398.218;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=912;QR=7168;RO=182;RPL=23;RPP=52.9542;RPPR=398.218;RPR=0;RUN=1;SAF=0;SAP=52.9542;SAR=23;SRF=0;SRP=398.218;SRR=182;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:41,3:41:1639:3:121:0,-1.96512,-136.461 0/1:77:70,7:70:2761:7:270:-1.47925,0,-225.434 0/1:12:11,1:11:443:1:41:-0.482207,0,-36.6124 0/1:66:58,8:58:2247:8:321:-9.38902,0,-182.528 1/1:3:0,3:0:0:3:119:-11.0954,-0.90309,0 0/1:3:2,1:2:78:1:40:-3.09259,0,-6.50038 dDocent_Contig_11169 13 . C G 509.374 . AB=0.218487;ABP=84.9241;AC=3;AF=0.25;AN=12;AO=27;CIGAR=1X;DP=215;DPB=215;DPRA=1.23387;EPP=61.6401;EPPR=411.247;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.296296;PAIREDR=0.31383;PAO=0;PQA=0;PQR=0;PRO=0;QA=1050;QR=7464;RO=188;RPL=0;RPP=61.6401;RPPR=411.247;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=188;SRP=411.247;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:52:46,6:46:1845:6:238:-6.14059,0,-150.607 0/1:36:27,9:27:1074:9:339:-20.0255,0,-86.116 0/0:34:33,1:33:1307:1:40:0,-6.23934,-113.905 0/1:31:20,11:20:782:11:433:-29.9931,0,-61.3679 0/0:40:40,0:40:1582:0:0:0,-12.0412,-142.619 0/0:22:22,0:22:874:0:0:0,-6.62266,-78.9719 dDocent_Contig_11170 1 . N A 1070.56 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=35;CIGAR=1X;DP=35;DPB=35;DPRA=0;EPP=79.0118;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1164;QR=0;RO=0;RPL=0;RPP=79.0118;RPPR=0;RPR=35;RUN=1;SAF=0;SAP=79.0118;SAR=35;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:7:0,7:0:0:7:203:-18.554,-2.10721,0 1/1:5:0,5:0:0:5:163:-14.9913,-1.50515,0 1/1:6:0,6:0:0:6:210:-19.2425,-1.80618,0 1/1:15:0,15:0:0:15:524:-47.4909,-4.51545,0 1/1:2:0,2:0:0:2:64:-6.07837,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_11172 16 . C T 1799.78 . AB=0.363636;ABP=38.5435;AC=6;AF=0.5;AN=12;AO=80;CIGAR=1X;DP=220;DPB=220;DPRA=0;EPP=176.728;EPPR=304.845;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.75;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.4;PAIREDR=0.47482;PAO=0;PQA=0;PQR=0;PRO=0;QA=2837;QR=5478;RO=139;RPL=0;RPP=176.728;RPPR=304.845;RPR=80;RUN=1;SAF=80;SAP=176.728;SAR=0;SRF=139;SRP=304.845;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:24,17:24:947:17:583:-40.3947,0,-73.1797 0/1:46:30,16:30:1175:16:577:-38.4142,0,-92.1735 0/1:32:22,10:22:865:10:336:-20.9273,0,-68.5237 0/1:39:29,10:29:1148:10:345:-19.6358,0,-91.8611 0/1:35:16,18:16:625:18:677:-50.9122,0,-46.227 0/1:27:18,9:18:718:9:319:-20.9154,0,-56.8183 dDocent_Contig_11174 11 . C T 1176.79 . AB=0.144092;ABP=766.58;AC=3;AF=0.25;AN=12;AO=143;CIGAR=1X;DP=1245;DPB=1245;DPRA=0;EPP=313.531;EPPR=2385.12;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.97366;PAO=0;PQA=0;PQR=0;PRO=0;QA=5298;QR=42983;RO=1101;RPL=0;RPP=313.531;RPPR=2393.8;RPR=143;RUN=1;SAF=143;SAP=313.531;SAR=0;SRF=1100;SRP=2385.12;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:159:146,13:146:5730:13:471:0,-5.14227,-472.844 0/1:229:186,43:186:7242:43:1565:-72.1828,0,-582.582 0/0:170:157,13:157:6160:13:500:0,-5.8273,-508.84 0/0:222:205,17:205:7953:17:652:0,-7.81258,-656.426 0/1:274:246,27:246:9606:27:989:-7.0291,0,-781.759 0/1:191:161,30:161:6292:30:1121:-43.6887,0,-508.597 dDocent_Contig_11175 98 . N C 64.5902 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=68;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11176 30 . C T 680.797 . AB=0.233577;ABP=87.4758;AC=2;AF=0.166667;AN=12;AO=32;CIGAR=1X;DP=193;DPB=193;DPRA=4.89286;EPP=72.4974;EPPR=352.617;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.919255;PAO=0;PQA=0;PQR=0;PRO=0;QA=1243;QR=6280;RO=161;RPL=0;RPP=72.4974;RPPR=352.617;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=161;SRP=352.617;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1061:0:0:0,-8.12781,-95.789 0/0:11:11,0:11:427:0:0:0,-3.31133,-38.7835 0/0:9:9,0:9:357:0:0:0,-2.70927,-32.4928 0/0:9:9,0:9:341:0:0:0,-2.70927,-31.0395 0/1:83:62,21:62:2447:21:821:-49.226,0,-195.417 0/1:54:43,11:43:1647:11:422:-22.0755,0,-132.225 dDocent_Contig_11177 98 . N C 1437.87 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=43;CIGAR=3X;DP=43;DPB=43;DPRA=0;EPP=96.3836;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=3.38813e-21;PAIRED=0.906977;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1565;QR=0;RO=0;RPL=43;RPP=96.3836;RPPR=0;RPR=0;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:3:0,3:0:0:3:106:-9.8891,-0.90309,0 1|1:2:0,2:0:0:2:70:-6.64733,-0.60206,0 1|1:1:0,1:0:0:1:37:-3.69783,-0.30103,0 1|1:11:0,11:0:0:11:400:-36.3438,-3.31133,0 1|1:16:0,16:0:0:16:588:-53.2576,-4.81648,0 1|1:10:0,10:0:0:10:364:-33.1057,-3.0103,0 dDocent_Contig_11178 28 . G A 3030.68 . AB=0.292271;ABP=158.181;AC=5;AF=0.416667;AN=12;AO=125;CIGAR=1X;DP=506;DPB=506;DPRA=0;EPP=274.444;EPPR=830.341;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.848;PAIREDR=0.88189;PAO=0;PQA=0;PQR=0;PRO=0;QA=4988;QR=15110;RO=381;RPL=0;RPP=274.444;RPPR=830.341;RPR=125;RUN=1;SAF=125;SAP=274.444;SAR=0;SRF=381;SRP=830.341;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:60:37,23:37:1495:23:912:-64.3202,0,-116.729 0/1:112:72,40:72:2875:40:1583:-108.992,0,-225.135 0/1:85:63,22:63:2504:22:893:-55.0887,0,-199.91 0/1:68:51,17:51:2038:17:685:-41.51,0,-163.136 0/1:89:70,19:70:2774:19:765:-42.3788,0,-222.976 0/0:92:88,4:88:3424:4:150:0,-13.8312,-294.357 dDocent_Contig_11179 98 . N A 79.0597 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=80;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:17:-1.61499,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:63:-5.98364,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11180 115 . G A 829.479 . AB=0.340206;ABP=24.5235;AC=5;AF=0.416667;AN=12;AO=34;CIGAR=1X;DP=119;DPB=119;DPRA=0;EPP=76.8404;EPPR=187.585;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.735294;PAIREDR=0.729412;PAO=0;PQA=0;PQR=0;PRO=0;QA=1352;QR=3433;RO=85;RPL=34;RPP=76.8404;RPPR=187.585;RPR=0;RUN=1;SAF=0;SAP=76.8404;SAR=34;SRF=0;SRP=187.585;SRR=85;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:11:6,5:6:239:5:202:-15.2505,0,-18.5711 0/1:37:25,12:25:1014:12:465:-31.0493,0,-80.4135 0/1:18:12,6:12:487:6:238:-16.3724,0,-38.7627 0/1:19:10,9:10:409:9:365:-27.4953,0,-31.451 0/1:12:11,1:11:441:1:41:-0.482207,0,-36.4318 0/0:22:21,1:21:843:1:41:0,-2.52809,-72.088 dDocent_Contig_11185 36 . C T 184.256 . AB=0.147727;ABP=97.8642;AC=2;AF=0.166667;AN=12;AO=24;CIGAR=1X1M;DP=319;DPB=319;DPRA=0;EPP=55.1256;EPPR=637.08;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=0;PAIREDR=0.917808;PAO=0;PQA=0;PQR=0;PRO=0;QA=963;QR=11423;RO=292;RPL=0;RPP=55.1256;RPPR=637.08;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=292;SRP=637.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:47:42,0,5:42:1626:0,5:0,203:-4.50465,-17.1479,-150.693,0,-133.948,-132.443 0|0:43:40,0,3:40:1575:0,3:0,120:0,-12.0412,-141.602,-1.75698,-131.717,-130.814 0|1:41:30,3,8:30:1143:3,8:122,318:-17.1424,-16.1076,-108.924,0,-83.6434,-91.3008 0|0:28:26,0,2:26:1022:0,2:0,81:0,-7.82678,-91.8772,-0.743106,-85.1972,-84.5951 0|0:77:76,0,1:76:3004:0,1:0,41:0,-22.8783,-270.06,-19.0847,-266.676,-266.375 0|0:83:78,0,5:78:3053:0,5:0,200:0,-23.4803,-274.479,-6.60646,-258.004,-256.499 dDocent_Contig_11186 70 . A T 85.728 . AB=0.185185;ABP=26.2531;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=2X;DP=241;DPB=241;DPRA=0.619565;EPP=18.2106;EPPR=506.792;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.285714;PAIREDR=0.49569;PAO=0;PQA=0;PQR=0;PRO=0;QA=272;QR=9077;RO=232;RPL=4;RPP=3.32051;RPPR=38.9894;RPR=3;RUN=1;SAF=4;SAP=3.32051;SAR=3;SRF=147;SRP=38.9894;SRR=85;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:27:22,5:22:846:5:195:-9.79463,0,-68.3275 0|0:77:77,0:77:2982:0:0:0,-23.1793,-268.522 0|0:30:27,2:27:1069:2:77:0,-1.75559,-89.2193 0|0:47:47,0:47:1859:0:0:0,-14.1484,-167.534 0|0:35:34,0:34:1346:0:0:0,-10.235,-121 0|0:25:25,0:25:975:0:0:0,-7.52575,-88.0568 dDocent_Contig_11187 11 . C A 1654.17 . AB=0.571429;ABP=7.35324;AC=3;AF=0.25;AN=12;AO=60;CIGAR=1X;DP=168;DPB=168;DPRA=0;EPP=133.299;EPPR=237.529;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2375;QR=4234;RO=108;RPL=0;RPP=133.299;RPPR=237.529;RPR=60;RUN=1;SAF=60;SAP=133.299;SAR=0;SRF=108;SRP=237.529;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:9,27:9:364:27:1071:-85.8413,0,-22.2873 0/1:23:20,3:20:759:3:123:-4.5411,0,-61.6944 0/1:39:13,26:13:520:26:1019:-80.2556,0,-35.4047 0/0:41:39,2:39:1538:2:81:0,-4.6565,-130.971 0/0:14:13,1:13:505:1:40:0,-0.218741,-41.7949 0/0:15:14,1:14:548:1:41:0,-0.420883,-45.5664 dDocent_Contig_11189 13 . C T 867.195 . AB=0.21134;ABP=143.417;AC=3;AF=0.25;AN=12;AO=49;CIGAR=1X;DP=355;DPB=355;DPRA=1.27917;EPP=109.412;EPPR=667.481;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9967;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.993464;PAO=0;PQA=0;PQR=0;PRO=0;QA=1967;QR=12295;RO=306;RPL=0;RPP=109.412;RPPR=667.481;RPR=49;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=306;SRP=667.481;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:62:55,7:55:2189:7:283:-7.17952,0,-178.517 0/1:51:44,7:44:1762:7:285:-10.6719,0,-143.442 0/0:83:77,6:77:3110:6:228:0,-4.10947,-259.085 0/1:81:54,27:54:2182:27:1091:-74.0899,0,-172.161 0/0:48:48,0:48:1922:0:0:0,-14.4494,-173.178 0/0:30:28,2:28:1130:2:80:0,-1.43932,-94.3879 dDocent_Contig_11190 42 . A T 558.793 . AB=0.207143;ABP=107.303;AC=4;AF=0.333333;AN=12;AO=29;CIGAR=1X;DP=193;DPB=193;DPRA=1.32075;EPP=65.983;EPPR=359.132;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.482759;PAIREDR=0.408537;PAO=0;PQA=0;PQR=0;PRO=0;QA=1153;QR=6417;RO=164;RPL=0;RPP=65.983;RPPR=359.132;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=164;SRP=359.132;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:32,0:32:1237:0:0:0,-9.63296,-111.603 0/1:38:33,5:33:1272:5:191:-6.11742,0,-103.303 0/0:21:21,0:21:833:0:0:0,-6.32163,-75.2865 0/1:39:35,4:35:1361:4:161:-3.1351,0,-111 0/1:29:16,13:16:643:13:519:-38.3257,0,-49.4747 0/1:34:27,7:27:1071:7:282:-15.5176,0,-86.445 dDocent_Contig_11191 90 . G T 206.15 . AB=0.206349;ABP=50.1967;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=346;DPB=346;DPRA=1.11307;EPP=31.2394;EPPR=726.111;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.769231;PAIREDR=0.708709;PAO=0;PQA=0;PQR=0;PRO=0;QA=453;QR=11354;RO=333;RPL=5;RPP=4.51363;RPPR=3.79933;RPR=8;RUN=1;SAF=5;SAP=4.51363;SAR=8;SRF=161;SRP=3.79933;SRR=172;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:59,0:59:2034:0:0:0,-17.7608,-183.335 0/0:92:92,0:92:3159:0:0:0,-27.6948,-284.549 0/0:40:40,0:40:1371:0:0:0,-12.0412,-123.688 0/0:42:42,0:42:1403:0:0:0,-12.6433,-126.559 0/0:50:50,0:50:1676:0:0:0,-15.0515,-151.12 0/1:63:50,13:50:1711:13:453:-22.1379,0,-135.313 dDocent_Contig_11194 25 . T A 112.809 . AB=0.189189;ABP=34.0565;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=132;DPB=132;DPRA=1.07143;EPP=22.5536;EPPR=267.93;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.777778;PAIREDR=0.647541;PAO=0;PQA=0;PQR=0;PRO=0;QA=354;QR=4739;RO=122;RPL=0;RPP=22.5536;RPPR=267.93;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=122;SRP=267.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:941:0:0:0,-7.22472,-84.9965 0/0:36:35,1:35:1320:1:39:0,-6.94052,-115.167 0/1:12:8,4:8:323:4:157:-10.8966,0,-25.8264 0/0:18:18,0:18:705:0:0:0,-5.41854,-63.7735 0/0:17:16,1:16:602:1:40:0,-1.12183,-50.5046 0/1:25:21,3:21:848:3:118:-3.60425,0,-69.294 dDocent_Contig_11196 10 . A T 213.51 . AB=0.318182;ABP=9.32731;AC=6;AF=0.5;AN=12;AO=11;CIGAR=1M1D1M1X3M2X;DP=62;DPB=60.7778;DPRA=0.361111;EPP=26.8965;EPPR=113.755;GTI=0;LEN=1;MEANALT=1;MQM=31;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=425;QR=1987;RO=51;RPL=0;RPP=26.8965;RPPR=113.755;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=51;SRP=113.755;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:22:22,0:22:856:0:0:0,-6.62266,-77.3605 0|1:10:5,5:5:198:5:190:-10.8308,0,-15.1875 0|0:14:14,0:14:550:0:0:0,-4.21442,-49.8456 0|1:12:10,2:10:383:2:75:-2.1037,0,-31.211 1|1:2:0,2:0:0:2:80:-5.79223,-0.60206,0 1|1:2:0,2:0:0:2:80:-5.79223,-0.60206,0 dDocent_Contig_11197 98 . N A 63.6413 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=67;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:67:-6.36304,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11198 11 . G A 160.401 . AB=0.1875;ABP=43.7254;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=184;DPB=184;DPRA=0.705882;EPP=22.5536;EPPR=383.018;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=366;QR=6922;RO=175;RPL=0;RPP=22.5536;RPPR=383.018;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=175;SRP=383.018;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1301:0:0:0,-9.93399,-117.356 0/0:33:33,0:33:1307:0:0:0,-9.93399,-117.897 0/0:38:38,0:38:1521:0:0:0,-11.4391,-137.131 0/0:32:32,0:32:1275:0:0:0,-9.63296,-115.019 0/1:27:21,6:21:843:6:244:-14.211,0,-68.0557 0/1:21:18,3:18:675:3:122:-5.05086,0,-54.7366 dDocent_Contig_11199 65 . T G 670.399 . AB=0.323944;ABP=22.1254;AC=4;AF=0.333333;AN=12;AO=28;CIGAR=1X;DP=177;DPB=177;DPRA=0.752475;EPP=63.8115;EPPR=324.388;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.785714;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1005;QR=5406;RO=148;RPL=28;RPP=63.8115;RPPR=324.388;RPR=0;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=148;SRP=324.388;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:11:11,0:11:398:0:0:0,-3.31133,-36.1626 0/1:66:43,22:43:1568:22:792:-51.667,0,-121.47 0/0:38:38,0:38:1431:0:0:0,-11.4391,-129.074 0/0:52:52,0:52:1869:0:0:0,-15.6536,-168.48 1/1:5:0,5:0:0:5:180:-16.5519,-1.50515,0 0/1:5:4,1:4:140:1:33:-1.79398,0,-11.4388 dDocent_Contig_11200 125 . C T 82.4037 . AB=0.4;ABP=3.87889;AC=1;AF=0.1;AN=10;AO=4;CIGAR=1X1M1X;DP=44;DPB=44;DPRA=1.17647;EPP=11.6962;EPPR=89.8692;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.825;PAO=0;PQA=0;PQR=0;PRO=0;QA=139;QR=1383;RO=40;RPL=0;RPP=11.6962;RPPR=89.8692;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=89.8692;SRR=40;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 0|0:5:5,0:5:169:0:0:0,-1.50515,-15.5426 0|0:7:7,0:7:243:0:0:0,-2.10721,-22.2088 0|0:8:8,0:8:280:0:0:0,-2.40824,-25.54 0|0:14:14,0:14:485:0:0:0,-4.21442,-43.9802 0|1:10:6,4:6:206:4:139:-9.84239,0,-15.8663 dDocent_Contig_11202 95 . C T 191.347 . AB=0.296296;ABP=12.7417;AC=3;AF=0.25;AN=12;AO=11;CIGAR=1X;DP=202;DPB=202;DPRA=0.883562;EPP=26.8965;EPPR=417.762;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994764;PAO=0;PQA=0;PQR=0;PRO=0;QA=378;QR=6413;RO=191;RPL=11;RPP=26.8965;RPPR=417.762;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=191;SRP=417.762;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:621:0:0:0,-5.41854,-56.215 0/0:43:42,1:42:1397:1:35:0,-9.44566,-122.523 0/0:58:57,1:57:1894:1:34:0,-14.0608,-167.336 0/1:27:19,8:19:653:8:275:-16.9572,0,-50.9651 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 0/0:55:55,0:55:1848:0:0:0,-16.5566,-166.601 dDocent_Contig_11203 10 . A T 3150.34 . AB=0.497835;ABP=3.0197;AC=6;AF=0.5;AN=12;AO=115;CIGAR=1X;DP=231;DPB=231;DPRA=0;EPP=252.73;EPPR=254.901;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4376;QR=4612;RO=116;RPL=0;RPP=252.73;RPPR=254.901;RPR=115;RUN=1;SAF=115;SAP=252.73;SAR=0;SRF=116;SRP=254.901;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:17,17:17:668:17:638:-47.5111,0,-50.2125 0/1:33:29,4:29:1153:4:154:-4.29947,0,-94.1196 0/1:45:15,30:15:605:30:1122:-87.7309,0,-41.242 0/1:46:21,25:21:833:25:962:-73.0358,0,-61.4309 0/1:32:18,14:18:723:14:537:-39.0409,0,-55.7633 0/1:41:16,25:16:630:25:963:-74.6378,0,-44.6914 dDocent_Contig_11204 40 . A G 502.623 . AB=0.583333;ABP=4.45795;AC=3;AF=0.3;AN=10;AO=16;CIGAR=1X;DP=80;DPB=80;DPRA=0.722222;EPP=37.7539;EPPR=141.985;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=645;QR=2534;RO=64;RPL=0;RPP=37.7539;RPPR=141.985;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=64;SRP=141.985;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:10,14:10:404:14:564:-43.8774,0,-29.4953 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. 0/0:11:11,0:11:440:0:0:0,-3.31133,-39.9551 0/0:13:13,0:13:517:0:0:0,-3.91339,-46.873 0/0:30:30,0:30:1173:0:0:0,-9.0309,-105.85 dDocent_Contig_11205 82 . A T 365.827 . AB=0.2;ABP=100.727;AC=2;AF=0.25;AN=8;AO=25;CIGAR=1X;DP=143;DPB=143;DPRA=6.94444;EPP=57.2971;EPPR=259.244;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=855;QR=3897;RO=118;RPL=25;RPP=57.2971;RPPR=259.244;RPR=0;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=118;SRP=259.244;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:6:6,0:6:203:0:0:0,-1.80618,-18.6021 0/1:68:53,15:53:1754:15:498:-24.6673,0,-137.669 0/1:57:47,10:47:1545:10:357:-15.3134,0,-122.175 0/0:12:12,0:12:395:0:0:0,-3.61236,-35.8674 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11206 7 . T C 9664.18 . AB=0.5671;ABP=12.044;AC=6;AF=0.5;AN=12;AO=302;CIGAR=1X;DP=439;DPB=439;DPRA=2.17297;EPP=550.739;EPPR=296.159;GTI=0;LEN=1;MEANALT=1.2;MQM=59.9801;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.937086;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11577;QR=5155;RO=135;RPL=0;RPP=658.795;RPPR=296.159;RPR=302;RUN=1;SAF=289;SAP=550.739;SAR=13;SRF=135;SRP=296.159;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:36,0:36:1383:0:0:0,-10.8371,-124.588 0/1:58:47,11:47:1796:11:401:-18.9726,0,-144.431 0/1:40:35,5:35:1324:5:195:-5.883,0,-107.406 0/1:8:4,4:4:152:4:151:-11.5491,0,-11.641 0/1:125:13,111:13:500:111:4239:-344.153,0,-7.90013 1/1:171:0,171:0:0:171:6591:-593.082,-51.4761,0 dDocent_Contig_11207 9 . C T 301.473 . AB=0.152778;ABP=153.807;AC=1;AF=0.0833333;AN=12;AO=40;CIGAR=1X;DP=879;DPB=879;DPRA=1.87255;EPP=89.8692;EPPR=1824.88;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1522;QR=32219;RO=839;RPL=0;RPP=89.8692;RPPR=1824.88;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=839;SRP=1824.88;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:201:186,15:186:7145:15:579:0,-8.05418,-590.451 0/0:228:225,3:225:8625:3:113:0,-58.0959,-765.457 0/0:249:249,0:249:9563:0:0:0,-74.9565,-860.347 0/1:144:122,22:122:4687:22:830:-31.6702,0,-378.523 0/0:33:33,0:33:1267:0:0:0,-9.93399,-114.32 0/0:24:24,0:24:932:0:0:0,-7.22472,-84.1961 dDocent_Contig_11208 9 . C T 408.682 . AB=0.178808;ABP=138.317;AC=3;AF=0.25;AN=12;AO=32;CIGAR=1X;DP=277;DPB=277;DPRA=1.03111;EPP=72.4974;EPPR=535.021;GTI=0;LEN=1;MEANALT=1;MQM=52.0938;MQMR=59.0449;NS=6;NUMALT=1;ODDS=0;PAIRED=0.9375;PAIREDR=0.991837;PAO=0;PQA=0;PQR=0;PRO=0;QA=1234;QR=9434;RO=245;RPL=0;RPP=72.4974;RPPR=535.021;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=245;SRP=535.021;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:35,7:35:1354:7:266:-11.6577,0,-109.03 0/1:64:51,13:51:1949:13:502:-26.2628,0,-155.875 0/0:20:19,1:19:729:1:38:0,-2.22333,-62.1418 0/1:45:38,7:38:1459:7:273:-8.16958,0,-117.838 0/0:61:57,4:57:2202:4:155:0,-10.6195,-190.189 0/0:45:45,0:45:1741:0:0:0,-13.5463,-156.788 dDocent_Contig_11209 9 . C T 1747.29 . AB=0.344498;ABP=46.9073;AC=6;AF=0.5;AN=12;AO=72;CIGAR=1X;DP=209;DPB=209;DPRA=0;EPP=159.356;EPPR=264.609;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.555556;PAIREDR=0.669118;PAO=0;PQA=0;PQR=0;PRO=0;QA=2740;QR=5263;RO=136;RPL=0;RPP=159.356;RPPR=298.331;RPR=72;RUN=1;SAF=72;SAP=159.356;SAR=0;SRF=132;SRP=264.609;SRR=4;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:35,6:35:1357:6:231:-8.81568,0,-110.071 0/1:46:23,23:23:893:23:874:-65.1301,0,-66.8418 0/1:27:17,10:17:657:10:385:-26.8786,0,-51.3388 0/1:29:22,7:22:846:7:259:-14.9343,0,-67.7327 0/1:20:13,7:13:507:7:266:-18.2811,0,-39.9589 0/1:46:26,19:26:1003:19:725:-51.911,0,-76.9133 dDocent_Contig_11210 209 . N G 163.794 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=162;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:40:-3.99568,-0.30103,0 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11211 22 . C T 205.599 . AB=0.179104;ABP=62.9365;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=202;DPB=202;DPRA=1.1931;EPP=39.9253;EPPR=402.561;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0588235;PAIREDR=0.36413;PAO=0;PQA=0;PQR=0;PRO=0;QA=676;QR=7390;RO=184;RPL=0;RPP=39.9253;RPPR=402.561;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=184;SRP=402.561;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:46:44,2:44:1772:2:77:0,-6.53855,-152.382 0/1:42:36,6:36:1462:6:238:-9.15052,0,-119.179 0/0:29:28,0:28:1120:0:0:0,-8.42884,-100.678 0/0:19:18,1:18:708:1:41:0,-1.625,-59.9396 0/0:41:39,2:39:1558:2:78:0,-4.93893,-133.052 0/1:25:19,6:19:770:6:242:-14.6312,0,-62.0926 dDocent_Contig_11212 19 . T G 226.164 . AB=0.153846;ABP=111.25;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=255;DPB=255;DPRA=1.05645;EPP=39.9253;EPPR=519.821;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.529412;PAIREDR=0.92437;PAO=0;PQA=0;PQR=0;PRO=0;QA=667;QR=9523;RO=238;RPL=0;RPP=39.9253;RPPR=519.821;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=238;SRP=519.821;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:55:49,6:49:1978:6:224:-3.95837,0,-161.654 0/1:49:39,10:39:1556:10:403:-21.8791,0,-125.527 0/0:43:43,0:43:1711:0:0:0,-12.9443,-154.21 0/0:27:26,1:26:1038:1:40:0,-4.13213,-89.7154 0/0:36:36,0:36:1431:0:0:0,-10.8371,-129.04 0/0:45:45,0:45:1809:0:0:0,-13.5463,-163.018 dDocent_Contig_11213 45 . A C 2032.78 . AB=0.32636;ABP=65.6014;AC=6;AF=0.5;AN=12;AO=78;CIGAR=1X;DP=239;DPB=239;DPRA=0;EPP=172.385;EPPR=341.814;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.410256;PAIREDR=0.725;PAO=0;PQA=0;PQR=0;PRO=0;QA=3157;QR=6289;RO=160;RPL=0;RPP=172.385;RPPR=341.814;RPR=78;RUN=1;SAF=78;SAP=172.385;SAR=0;SRF=160;SRP=350.446;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:29,3:29:1143:3:122:-1.73953,0,-93.5185 0/1:33:23,10:23:855:10:397:-26.1525,0,-67.3077 0/1:32:24,8:24:961:8:328:-20.2574,0,-77.1575 0/1:34:18,16:18:730:16:646:-48.2375,0,-55.7895 0/1:33:16,17:16:610:17:688:-52.3153,0,-45.2832 0/1:75:50,24:50:1990:24:976:-65.4987,0,-156.645 dDocent_Contig_11214 1 . N T 371.948 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=12;CIGAR=1X;DP=12;DPB=12;DPRA=0;EPP=29.068;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=45.3333;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=401;QR=0;RO=0;RPL=0;RPP=29.068;RPPR=0;RPR=12;RUN=1;SAF=0;SAP=29.068;SAR=12;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.46681,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:6:0,6:0:0:6:196:-17.8428,-1.80618,0 1/1:5:0,5:0:0:5:170:-15.4072,-1.50515,0 dDocent_Contig_11215 9 . C T 1368.15 . AB=0.22549;ABP=203.297;AC=5;AF=0.416667;AN=12;AO=70;CIGAR=1X;DP=349;DPB=349;DPRA=0;EPP=155.013;EPPR=608.851;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2662;QR=10757;RO=279;RPL=0;RPP=155.013;RPPR=608.851;RPR=70;RUN=1;SAF=70;SAP=155.013;SAR=0;SRF=279;SRP=608.851;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:57:37,20:37:1418:20:762:-51.7465,0,-110.741 0/1:76:65,11:65:2492:11:412:-14.5477,0,-201.601 0/1:54:49,5:49:1907:5:195:-1.66858,0,-155.614 0/1:60:42,18:42:1628:18:681:-43.5598,0,-128.721 0/1:59:44,15:44:1689:15:573:-34.1505,0,-134.507 0/0:43:42,1:42:1623:1:39:0,-9.04772,-142.437 dDocent_Contig_11216 22 . A C 3694.5 . AB=0.568075;ABP=11.584;AC=3;AF=0.25;AN=12;AO=127;CIGAR=1X;DP=356;DPB=356;DPRA=2.09677;EPP=278.787;EPPR=500.277;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5090;QR=9083;RO=229;RPL=0;RPP=278.787;RPPR=500.277;RPR=127;RUN=1;SAF=127;SAP=278.787;SAR=0;SRF=229;SRP=500.277;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:31,0:31:1232:0:0:0,-9.33193,-111.15 0/0:92:87,5:87:3469:5:201:0,-9.22366,-293.783 0/0:20:19,1:19:723:1:41:0,-1.92603,-61.2917 0/1:49:45,4:45:1807:4:162:-0.216486,0,-148.093 0/1:104:37,67:37:1449:67:2695:-211.356,0,-99.3612 0/1:60:10,50:10:403:50:1991:-161.315,0,-18.5683 dDocent_Contig_11217 16 . A G 118.613 . AB=0.112;ABP=166.461;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=497;DPB=497;DPRA=1.68011;EPP=33.4109;EPPR=1051.83;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=563;QR=19223;RO=483;RPL=0;RPP=33.4109;RPPR=1051.83;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=483;SRP=1051.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:47:47,0:47:1877:0:0:0,-14.1484,-169.139 0/0:91:91,0:91:3588:0:0:0,-27.3937,-322.956 0/0:30:30,0:30:1205:0:0:0,-9.0309,-108.721 0/0:31:31,0:31:1213:0:0:0,-9.33193,-109.452 0/1:125:111,14:111:4417:14:563:-13.3842,0,-359.849 0/0:173:173,0:173:6923:0:0:0,-52.0782,-622.751 dDocent_Contig_11218 22 . T A 2401.77 . AB=0.287324;ABP=142.48;AC=6;AF=0.5;AN=12;AO=102;CIGAR=1X;DP=355;DPB=355;DPRA=0;EPP=224.5;EPPR=550.221;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.705882;PAIREDR=0.785714;PAO=0;PQA=0;PQR=0;PRO=0;QA=3958;QR=9999;RO=252;RPL=0;RPP=224.5;RPPR=550.221;RPR=102;RUN=1;SAF=102;SAP=224.5;SAR=0;SRF=252;SRP=550.221;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:18,13:18:724:13:508:-36.7287,0,-56.154 0/1:81:55,26:55:2169:26:998:-65.7373,0,-171.001 0/1:58:37,20:37:1497:20:774:-52.552,0,-117.558 0/1:47:33,14:33:1293:14:546:-35.3328,0,-102.485 0/1:63:57,6:57:2261:6:233:-2.37382,0,-184.695 0/1:75:52,23:52:2055:23:899:-58.6445,0,-162.565 dDocent_Contig_11219 9 . C T 213.481 . AB=0.16129;ABP=95.6831;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=153;DPB=153;DPRA=2.64286;EPP=37.7539;EPPR=291.88;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.978102;PAO=0;PQA=0;PQR=0;PRO=0;QA=615;QR=5228;RO=137;RPL=0;RPP=37.7539;RPPR=300.502;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=136;SRP=291.88;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:17,1:17:639:1:39:0,-1.52198,-53.9455 0/1:43:37,6:37:1403:6:230:-8.12204,0,-113.606 0/0:20:20,0:20:757:0:0:0,-6.0206,-68.456 0/1:50:41,9:41:1587:9:346:-16.4479,0,-128.046 0/0:10:10,0:10:380:0:0:0,-3.0103,-34.553 0/0:12:12,0:12:462:0:0:0,-3.61236,-41.9306 dDocent_Contig_11220 59 . A T 781.978 . AB=0;ABP=0;AC=4;AF=0.333333;AN=12;AO=36;CIGAR=1X;DP=90;DPB=90;DPRA=1.33333;EPP=81.1833;EPPR=120.27;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=855;QR=1762;RO=54;RPL=36;RPP=81.1833;RPPR=120.27;RPR=0;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=54;SRP=120.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:384:0:0:0,-3.61236,-34.8707 0/0:7:7,0:7:228:0:0:0,-2.10721,-20.8389 0/0:16:16,0:16:518:0:0:0,-4.81648,-46.9311 0/0:19:19,0:19:632:0:0:0,-5.71957,-57.196 1/1:29:0,29:0:0:29:688:-62.1522,-8.72987,0 1/1:7:0,7:0:0:7:167:-15.2674,-2.10721,0 dDocent_Contig_11222 32 . A G 126.945 . AB=0.130952;ABP=102.381;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=617;DPB=617;DPRA=3.30864;EPP=46.4397;EPPR=1299.38;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=787;QR=23520;RO=597;RPL=0;RPP=46.4397;RPPR=1299.38;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=597;SRP=1299.38;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:68:68,0:68:2672:0:0:0,-20.47,-240.613 0/0:162:159,3:159:6297:3:113:0,-38.2308,-555.967 0/0:272:267,5:267:10540:5:201:0,-63.4091,-929.451 0/1:84:73,11:73:2835:11:435:-14.2173,0,-229.972 0/0:13:13,0:13:526:0:0:0,-3.91339,-47.687 0/0:18:17,1:17:650:1:38:0,-1.62127,-55.0176 dDocent_Contig_11223 77 . C T 78.0267 . AB=0.25;ABP=11.6962;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=114;DPB=114;DPRA=0.816327;EPP=11.6962;EPPR=241.872;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=153;QR=4052;RO=110;RPL=4;RPP=11.6962;RPPR=241.872;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=110;SRP=241.872;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:838:0:0:0,-6.92369,-75.7424 0/0:43:43,0:43:1531:0:0:0,-12.9443,-138.072 0/0:27:27,0:27:1043:0:0:0,-8.12781,-94.1781 0/1:16:12,4:12:457:4:153:-9.32513,0,-36.6598 0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3132 0/0:1:1,0:1:39:0:0:0,-0.30103,-3.89656 dDocent_Contig_11224 15 . A G 425.545 . AB=0.2;ABP=112.453;AC=4;AF=0.333333;AN=12;AO=32;CIGAR=1X3M1X;DP=221;DPB=221;DPRA=0.905;EPP=5.45321;EPPR=28.3901;GTI=0;LEN=1;MEANALT=1;MQM=58.125;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.428571;PAO=0;PQA=0;PQR=0;PRO=0;QA=1139;QR=7075;RO=189;RPL=0;RPP=72.4974;RPPR=413.419;RPR=32;RUN=1;SAF=13;SAP=5.45321;SAR=19;SRF=118;SRP=28.3901;SRR=71;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:26:18,8:18:663:8:301:-19.6196,0,-52.1683 0|1:23:20,3:20:760:3:99:-2.3109,0,-61.7972 0|0:40:40,0:40:1469:0:0:0,-12.0412,-132.485 0|1:24:20,4:20:709:4:139:-5.62797,0,-56.903 0|1:67:54,13:54:2059:13:470:-22.1836,0,-165.353 0|0:41:37,4:37:1415:4:130:0,-0.320568,-115.599 dDocent_Contig_11225 60 . C T 70.2929 . AB=0.227273;ABP=17.2236;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=233;DPB=233;DPRA=0.521327;EPP=13.8677;EPPR=498.106;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.960526;PAO=0;PQA=0;PQR=0;PRO=0;QA=165;QR=7767;RO=228;RPL=5;RPP=13.8677;RPPR=498.106;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=228;SRP=498.106;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:54,0:54:1830:0:0:0,-16.2556,-164.981 0/0:59:59,0:59:1980:0:0:0,-17.7608,-178.473 0/0:46:46,0:46:1592:0:0:0,-13.8474,-143.572 0/0:30:30,0:30:1039:0:0:0,-9.0309,-93.8216 0/1:22:17,5:17:581:5:165:-8.55217,0,-45.99 0/0:22:22,0:22:745:0:0:0,-6.62266,-67.3656 dDocent_Contig_11226 12 . G A 269.766 . AB=0.194444;ABP=61.3988;AC=2;AF=0.2;AN=10;AO=17;CIGAR=1X1M1X;DP=149;DPB=149;DPRA=1.94737;EPP=39.9253;EPPR=289.645;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=676;QR=5222;RO=132;RPL=0;RPP=39.9253;RPPR=289.645;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=132;SRP=289.645;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:15:15,0:15:599:0:0:0,-4.51545,-54.2508 0|1:36:33,3:33:1292:3:121:-0.443117,0,-105.718 0|1:36:25,11:25:1000:11:434:-28.576,0,-79.4607 0|0:39:36,3:36:1430:3:121:0,-0.459973,-117.676 .:.:.:.:.:.:.:. 0|0:23:23,0:23:901:0:0:0,-6.92369,-81.4006 dDocent_Contig_11227 52 . G A 375.862 . AB=0.295455;ABP=19.0002;AC=6;AF=0.5;AN=12;AO=17;CIGAR=1X;DP=53;DPB=53;DPRA=5.1;EPP=39.9253;EPPR=81.1833;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=7;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=665;QR=1431;RO=36;RPL=0;RPP=39.9253;RPPR=81.1833;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=36;SRP=81.1833;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:10:6,4:6:230:4:152:-10.0783,0,-0.837492 0/1:9:7,2:7:286:2:82:-4.40835,0,-1.76981 0/1:15:12,3:12:485:3:115:-5.55353,0,-3.11278 0/1:10:6,4:6:242:4:157:-10.4934,0,-0.838799 1/1:7:3,4:3:122:4:159:-11.6619,-0.147631,0 0/0:2:2,0:2:66:0:0:0,-0.60206,-1.32467 dDocent_Contig_11229 56 . G T 129.429 . AB=0.136842;ABP=111.835;AC=3;AF=0.25;AN=12;AO=16;CIGAR=1X;DP=204;DPB=204;DPRA=3.01724;EPP=37.7539;EPPR=411.247;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0;PAIREDR=0.920213;PAO=0;PQA=0;PQR=0;PRO=0;QA=628;QR=7417;RO=188;RPL=16;RPP=37.7539;RPPR=411.247;RPR=0;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=188;SRP=411.247;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:29,4:29:1140:4:160:-4.84981,0,-92.9473 0/1:57:51,6:51:2044:6:228:-3.72361,0,-166.992 0/0:80:77,3:77:3020:3:121:0,-12.8022,-260.618 0/0:23:23,0:23:891:0:0:0,-6.92369,-80.4879 0/1:5:2,3:2:78:3:119:-9.58986,0,-5.89815 0/0:6:6,0:6:244:0:0:0,-1.80618,-22.3388 dDocent_Contig_11231 11 . T C 11906.8 . AB=0.172535;ABP=267.532;AC=1;AF=0.0833333;AN=12;AO=51;CIGAR=1X6M1X;DP=471;DPB=471;DPRA=0;EPP=113.755;EPPR=165.871;GTI=0;LEN=1;MEANALT=2.4;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1976;QR=2980;RO=75;RPL=0;RPP=113.755;RPPR=165.871;RPR=51;RUN=1;SAF=51;SAP=113.755;SAR=0;SRF=75;SRP=165.871;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:63:13,0,7,43,0:13:514:0,7,43,0:0,266,1731,0:-138.766,-142.68,-184.979,-120.871,-163.169,-161.062,0,-42.31,-20.5036,-29.3657,-142.68,-184.979,-163.169,-42.31,-184.979 0|0:76:35,0,3,37,0:35:1390:0,3,37,0:0,119,1489,0:-112.205,-122.742,-237.172,-112.946,-227.376,-226.473,0,-114.456,-104.66,-103.318,-122.742,-237.172,-227.376,-114.456,-237.172 0|0:44:20,0,5,19,0:20:799:0,5,19,0:0,188,769,0:-57.4085,-63.4291,-129.24,-48.0389,-113.847,-112.341,0,-65.8292,-50.4377,-60.1096,-63.4291,-129.24,-113.847,-65.8292,-129.24 0|0:98:5,0,2,91,0:5:198:0,2,91,0:0,79,3617,0:-307.356,-308.861,-325.158,-302.36,-318.657,-318.055,-11.096,-27.3937,-20.8934,0,-308.861,-325.158,-318.657,-27.3937,-325.158 0|0:89:0,6,0,72,10:0:0:6,0,72,10:240,0,2903,398:-272.05,-252.28,-250.474,-272.05,-252.28,-272.05,-32.7663,-12.9961,-32.7663,-11.0922,-239.282,-219.512,-239.282,0,-236.272 1|0:101:2,1,34,64,0:2:79:1,34,64,0:40,1324,2555,0:-312.111,-309.418,-315.618,-203.92,-207.126,-200.186,-102.288,-105.494,0,-89.5237,-312.713,-315.919,-210.421,-108.79,-319.214 dDocent_Contig_11233 7 . T A 2078.85 . AB=0.270115;ABP=162.751;AC=4;AF=0.333333;AN=12;AO=94;CIGAR=1X;DP=489;DPB=489;DPRA=1.23404;EPP=207.129;EPPR=832.711;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.215736;PAO=0;PQA=0;PQR=0;PRO=0;QA=3538;QR=15021;RO=394;RPL=0;RPP=207.129;RPPR=858.57;RPR=94;RUN=1;SAF=94;SAP=207.129;SAR=0;SRF=391;SRP=832.711;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:97:61,35:61:2305:35:1306:-88.8031,0,-178.653 0/1:111:96,15:96:3632:15:574:-18.5871,0,-293.587 0/1:59:39,20:39:1497:20:751:-50.1551,0,-117.242 0/1:81:57,24:57:2190:24:907:-57.5619,0,-172.939 0/0:70:70,0:70:2692:0:0:0,-21.0721,-242.465 0/0:71:71,0:71:2705:0:0:0,-21.3731,-243.641 dDocent_Contig_11234 35 . G T 2969.6 . AB=0.707483;ABP=57.9766;AC=5;AF=0.416667;AN=12;AO=104;CIGAR=1X;DP=161;DPB=161;DPRA=2.1;EPP=228.843;EPPR=126.784;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3876;QR=2207;RO=57;RPL=0;RPP=228.843;RPPR=126.784;RPR=104;RUN=1;SAF=104;SAP=228.843;SAR=0;SRF=57;SRP=126.784;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:8,8:8:318:8:306:-23.082,0,-24.1703 0/1:37:6,31:6:206:31:1156:-93.1976,0,-7.72532 0/1:48:11,37:11:439:37:1384:-110.387,0,-25.4153 0/1:38:15,23:15:598:23:849:-65.2827,0,-42.7198 0/1:8:3,5:3:115:5:181:-14.2334,0,-8.31586 0/0:14:14,0:14:531:0:0:0,-4.21442,-48.1205 dDocent_Contig_11235 13 . G A 3201.46 . AB=0.314516;ABP=77.1206;AC=9;AF=0.75;AN=12;AO=78;CIGAR=2M1X3M2X4M;DP=248;DPB=256;DPRA=0;EPP=172.385;EPPR=128.956;GTI=0;LEN=1;MEANALT=5;MQM=58.6538;MQMR=60;NS=6;NUMALT=7;ODDS=0;PAIRED=0.858974;PAIREDR=0.931034;PAO=0;PQA=0;PQR=0;PRO=0;QA=3046;QR=2271;RO=58;RPL=0;RPP=172.385;RPPR=128.956;RPR=78;RUN=1;SAF=78;SAP=172.385;SAR=0;SRF=58;SRP=128.956;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:18:10,2,0,0,3,2,0,1:10:391:2,0,0,3,2,0,1:75,0,0,113,81,0,40:-3.71108,-3.05621,-34.6631,-6.72138,-35.2652,-38.9308,-6.72138,-35.2652,-38.9308,-38.9308,-2.83593,-31.3608,-35.0186,-35.0186,-34.1155,0,-28.5787,-32.2437,-32.2437,-28.3345,-31.6416,-6.72138,-35.2652,-38.9308,-38.9308,-35.0186,-32.2437,-38.9308,-3.40891,-31.967,-35.6323,-35.6323,-31.7216,-28.9441,-35.6323,-35.3313 1|1:41:6,1,3,3,10,5,0,12:6:235:1,3,3,10,5,0,12:40,121,114,380,190,0,467:-48.3185,-46.8288,-65.8544,-40.1551,-56.1864,-58.5791,-43.9432,-59.9728,-53.2999,-62.3651,-18.9591,-34.9909,-28.3171,-32.107,-35.2765,-34.7347,-50.7658,-44.0924,-47.8801,-22.8971,-52.5564,-50.1246,-66.1555,-59.4822,-63.2682,-38.2868,-54.0615,-69.4511,-11.8383,-27.8712,-21.1968,-24.988,0,-15.7768,-31.1672,-27.5548 0|1:24:9,3,0,4,1,4,0,3:9:359:3,0,4,1,4,0,3:115,0,158,39,160,0,121:-10.483,-7.69629,-36.36,-13.1923,-37.2631,-42.7709,-0.235127,-24.3171,-29.8208,-28.6166,-9.98468,-34.0576,-39.5646,-26.6141,-39.2635,0,-24.0828,-29.5867,-16.6347,-26.38,-28.3826,-13.1923,-37.2631,-42.7709,-29.8208,-39.5646,-29.5867,-42.7709,-3.20892,-27.2882,-32.7933,-19.8418,-29.5867,-19.6075,-32.7933,-31.8902 0|1:69:29,3,0,0,0,18,4,12:29:1126:3,0,0,0,18,4,12:116,0,0,0,705,143,466:-49.261,-52.4643,-144.084,-57.9908,-144.987,-150.518,-57.9908,-144.987,-150.518,-150.518,-57.9908,-144.987,-150.518,-150.518,-150.518,0,-87.0132,-92.5419,-92.5419,-92.5419,-87.1233,-49.712,-136.705,-142.235,-142.235,-142.235,-84.2607,-141.03,-19.6986,-106.703,-112.232,-112.232,-112.232,-54.2534,-103.95,-108.62 1|1:54:4,0,6,0,0,11,0,31:4:160:0,6,0,0,11,0,31:0,240,0,0,432,0,1206:-120.025,-121.23,-134.411,-101.471,-114.653,-112.847,-121.23,-134.411,-114.653,-134.411,-121.23,-134.411,-114.653,-134.411,-134.411,-85.6989,-98.8807,-79.1218,-98.8807,-98.8807,-95.5693,-121.23,-134.411,-114.653,-134.411,-134.411,-98.8807,-134.411,-22.3514,-35.5346,-15.7733,-35.5346,-35.5346,0,-35.5346,-26.2027 1|1:42:0,0,12,4,0,7,0,19:0:0:0,12,4,0,7,0,19:0,465,156,0,278,0,746:-99.5271,-99.5271,-99.5271,-61.3531,-61.3531,-57.7407,-86.7117,-86.7117,-48.538,-85.5075,-99.5271,-99.5271,-61.3531,-86.7117,-99.5271,-76.6392,-76.6392,-38.4652,-63.8237,-76.6392,-74.532,-99.5271,-99.5271,-61.3531,-86.7117,-99.5271,-76.6392,-99.5271,-38.1719,-38.1719,0,-25.3565,-38.1719,-15.2824,-38.1719,-32.4524 dDocent_Contig_11236 8 . A T 72251 . AB=0.751607;ABP=2227.77;AC=6;AF=0.5;AN=12;AO=3041;CIGAR=1X;DP=4046;DPB=4046;DPRA=0;EPP=6563.1;EPPR=1975.3;GTI=0;LEN=1;MEANALT=2.33333;MQM=42.5936;MQMR=57.0511;NS=6;NUMALT=1;ODDS=0;PAIRED=0.450181;PAIREDR=0.589362;PAO=0;PQA=0;PQR=0;PRO=0;QA=116588;QR=35675;RO=940;RPL=0;RPP=6606.46;RPPR=2044.19;RPR=3041;RUN=1;SAF=3036;SAP=6563.1;SAR=5;SRF=932;SRP=1975.3;SRR=8;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:517:107,403:107:4059:403:15477:-937.882,0,-206.989 0/1:885:214,667:214:8065:667:25639:-1619.77,0,-445.016 0/1:496:119,367:119:4533:367:14106:-885.994,0,-249.254 0/1:709:150,539:150:5662:539:20644:-1263.22,0,-293.382 0/1:697:166,521:166:6314:521:19924:-1244.29,0,-357.01 0/1:742:184,544:184:7042:544:20798:-1285.16,0,-389.253 dDocent_Contig_11238 21 . A G 1504.32 . AB=0.410448;ABP=12.3444;AC=3;AF=0.25;AN=12;AO=58;CIGAR=1X;DP=380;DPB=380;DPRA=0.521505;EPP=128.956;EPPR=700.053;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.987539;PAO=0;PQA=0;PQR=0;PRO=0;QA=2290;QR=12789;RO=321;RPL=0;RPP=128.956;RPPR=700.053;RPR=58;RUN=1;SAF=58;SAP=128.956;SAR=0;SRF=321;SRP=700.053;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:60:57,3:57:2281:3:123:0,-6.59701,-193.981 0/1:63:29,34:29:1169:34:1338:-101.71,0,-86.5245 0/1:31:20,11:20:787:11:445:-31.0736,0,-61.8129 0/1:40:30,10:30:1184:10:384:-22.8704,0,-94.7874 0/0:104:104,0:104:4181:0:0:0,-31.3071,-376.249 0/0:82:81,0:81:3187:0:0:0,-24.3834,-286.48 dDocent_Contig_11239 13 . C T 64.1314 . AB=0.108108;ABP=151.081;AC=3;AF=0.25;AN=12;AO=12;CIGAR=1X;DP=193;DPB=193;DPRA=1.35366;EPP=29.068;EPPR=396.047;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.98895;PAO=0;PQA=0;PQR=0;PRO=0;QA=486;QR=7326;RO=181;RPL=0;RPP=29.068;RPPR=396.047;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=181;SRP=396.047;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:932:0:0:0,-6.92369,-84.1821 0/0:28:28,0:28:1125:0:0:0,-8.42884,-101.53 0/0:31:31,0:31:1255:0:0:0,-9.33193,-113.215 0/1:34:30,4:30:1221:4:163:-4.82341,0,-99.9227 0/1:33:29,4:29:1171:4:159:-4.75684,0,-95.7317 0/1:44:40,4:40:1622:4:164:-1.90458,0,-132.961 dDocent_Contig_11240 109 . G A 520.544 . AB=0.22069;ABP=101.266;AC=2;AF=0.166667;AN=12;AO=34;CIGAR=1X;DP=237;DPB=237;DPRA=5.58333;EPP=76.8404;EPPR=443.819;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1161;QR=6822;RO=203;RPL=0;RPP=76.8404;RPPR=443.819;RPR=34;RUN=1;SAF=0;SAP=76.8404;SAR=34;SRF=0;SRP=443.819;SRR=203;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:56:54,2:54:1839:2:69:0,-10.305,-159.239 0/1:66:53,13:53:1750:13:437:-19.7837,0,-137.905 0/0:30:30,0:30:1011:0:0:0,-9.0309,-91.295 0/1:79:60,19:60:2027:19:655:-35.4921,0,-158.922 0/0:5:5,0:5:161:0:0:0,-1.50515,-14.8076 0/0:1:1,0:1:34:0:0:0,-0.30103,-3.39891 dDocent_Contig_11242 44 . A T 1868.84 . AB=0.261261;ABP=57.9622;AC=8;AF=0.666667;AN=12;AO=64;CIGAR=1X;DP=147;DPB=147;DPRA=0;EPP=141.985;EPPR=183.243;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.890625;PAIREDR=0.915663;PAO=0;PQA=0;PQR=0;PRO=0;QA=2544;QR=3300;RO=83;RPL=0;RPP=141.985;RPPR=183.243;RPR=64;RUN=1;SAF=64;SAP=141.985;SAR=0;SRF=83;SRP=183.243;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:26,7:26:1031:7:283:-15.909,0,-83.1493 0/1:28:25,3:25:992:3:106:-1.45766,0,-81.1488 0/1:22:14,8:14:556:8:317:-22.2737,0,-43.7586 0/1:28:17,11:17:680:11:441:-31.6149,0,-53.1033 1/1:24:1,23:1:41:23:925:-79.4606,-3.13015,0 1/1:12:0,12:0:0:12:472:-42.8268,-3.61236,0 dDocent_Contig_11243 88 . G A 666.813 . AB=0.219512;ABP=115.079;AC=2;AF=0.166667;AN=12;AO=39;CIGAR=1X;DP=440;DPB=440;DPRA=0.833333;EPP=87.6977;EPPR=873.771;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.794872;PAIREDR=0.59601;PAO=0;PQA=0;PQR=0;PRO=0;QA=1425;QR=14305;RO=401;RPL=22;RPP=4.40227;RPPR=60.4596;RPR=17;RUN=1;SAF=22;SAP=4.40227;SAR=17;SRF=252;SRP=60.4596;SRR=149;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:71:71,0:71:2529:0:0:0,-21.3731,-227.85 0/0:94:94,0:94:3358:0:0:0,-28.2968,-302.421 0/0:36:35,1:35:1206:1:34:0,-7.43817,-105.433 0/0:75:73,2:73:2630:2:73:0,-15.6465,-229.997 0/1:67:58,9:58:2102:9:319:-8.88231,0,-169.268 0/1:97:70,27:70:2480:27:999:-61.0208,0,-194.24 dDocent_Contig_11246 21 . T C 1521.14 . AB=0.3625;ABP=29.2851;AC=6;AF=0.5;AN=12;AO=58;CIGAR=1X2M1X;DP=160;DPB=160;DPRA=0;EPP=128.956;EPPR=224.5;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.706897;PAIREDR=0.72549;PAO=0;PQA=0;PQR=0;PRO=0;QA=2326;QR=3953;RO=102;RPL=0;RPP=128.956;RPPR=224.5;RPR=58;RUN=1;SAF=58;SAP=128.956;SAR=0;SRF=102;SRP=224.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:16:8,8:8:300:8:321:-24.442,0,-22.5383 0|1:40:34,6:34:1331:6:238:-9.75245,0,-108.024 0|1:21:8,13:8:311:13:521:-40.9164,0,-22.0295 0|1:34:26,8:26:1013:8:316:-18.5685,0,-81.2389 0|1:31:18,13:18:685:13:527:-38.445,0,-52.6468 0|1:18:8,10:8:313:10:403:-31.2117,0,-23.1141 dDocent_Contig_11247 107 . N T 97.7518 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=98;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:65:-6.17329,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11248 56 . A G 81.6341 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=2;CIGAR=1X;DP=140;DPB=140;DPRA=0.0724638;EPP=7.35324;EPPR=302.673;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.978261;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=5369;RO=138;RPL=2;RPP=7.35324;RPPR=302.673;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=138;SRP=302.673;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:55:55,0:55:2142:0:0:0,-16.5566,-192.974 0/0:51:51,0:51:1995:0:0:0,-15.3525,-179.748 0/0:13:13,0:13:492:0:0:0,-3.91339,-44.6099 0/0:18:18,0:18:700:0:0:0,-5.41854,-63.3264 0/0:1:1,0:1:40:0:0:0,-0.30103,-3.99568 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 dDocent_Contig_11249 147 . A G 162.495 . AB=0.304348;ABP=10.6577;AC=1;AF=0.1;AN=10;AO=7;CIGAR=1X;DP=68;DPB=68;DPRA=2.04444;EPP=18.2106;EPPR=135.47;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8033;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.868852;PAO=0;PQA=0;PQR=0;PRO=0;QA=268;QR=2418;RO=61;RPL=0;RPP=18.2106;RPPR=135.47;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=135.47;SRR=61;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:16,7:16:628:7:268:-17.5503,0,-49.9291 0/0:8:8,0:8:316:0:0:0,-2.40824,-28.8053 0/0:20:20,0:20:787:0:0:0,-6.0206,-71.145 0/0:15:15,0:15:605:0:0:0,-4.51545,-54.72 0/0:2:2,0:2:82:0:0:0,-0.60206,-7.77968 ./.:.:.:.:.:.:.:. dDocent_Contig_11250 209 . N G 99.7694 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=107;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:107:-9.9764,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11251 164 . A C 1889.6 . AB=0.5;ABP=3.0103;AC=6;AF=0.6;AN=10;AO=69;CIGAR=1X;DP=136;DPB=136;DPRA=0;EPP=152.842;EPPR=148.499;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2610;QR=2415;RO=67;RPL=69;RPP=152.842;RPPR=148.499;RPR=0;RUN=1;SAF=0;SAP=152.842;SAR=69;SRF=0;SRP=148.499;SRR=67;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:12,24:12:444:24:938:-73.8794,0,-29.46 0/1:24:21,3:21:718:3:99:-2.00762,0,-57.6909 0/1:29:11,18:11:375:18:706:-55.1314,0,-25.3398 0/1:45:23,22:23:878:22:785:-57.3844,0,-65.7793 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 dDocent_Contig_11252 60 . G T 1554.57 . AB=0.125;ABP=22.5536;AC=5;AF=0.416667;AN=12;AO=46;CIGAR=1X;DP=111;DPB=111;DPRA=1.41379;EPP=102.898;EPPR=144.156;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.543478;PAIREDR=0.707692;PAO=0;PQA=0;PQR=0;PRO=0;QA=1823;QR=2530;RO=65;RPL=46;RPP=102.898;RPPR=144.156;RPR=0;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=65;SRP=144.156;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:14,2:14:541:2:80:-2.77531,0,-44.2127 0/0:23:22,1:22:853:1:40:0,-2.92801,-73.0911 0/0:11:11,0:11:437:0:0:0,-3.31133,-39.6805 0/0:18:18,0:18:699:0:0:0,-5.41854,-63.2367 1/1:20:0,20:0:0:20:785:-70.9675,-6.0206,0 1/1:23:0,23:0:0:23:918:-82.9242,-6.92369,0 dDocent_Contig_11253 106 . N A 125.762 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=4;CIGAR=2X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=7.37776;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=136;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:4:0,4:0:0:4:136:-12.5759,-1.20412,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_11254 10 . T A 376.383 . AB=0.28;ABP=13.5202;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X3M1D1X2M1X20M;DP=93;DPB=89.9655;DPRA=0.78125;EPP=18.2106;EPPR=155.013;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=6;ODDS=0;PAIRED=0.714286;PAIREDR=0.685714;PAO=0;PQA=0;PQR=0;PRO=0;QA=265;QR=2739;RO=70;RPL=0;RPP=18.2106;RPPR=155.013;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=70;SRP=155.013;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:21:15,0,0,0,0,0,6:15:585:0,0,0,0,0,6:0,0,0,0,0,245:-16.1078,-20.6233,-68.6954,-20.6233,-68.6954,-68.6954,-20.6233,-68.6954,-68.6954,-68.6954,-20.6233,-68.6954,-68.6954,-68.6954,-68.6954,-20.6233,-68.6954,-68.6954,-68.6954,-68.6954,-68.6954,0,-48.4747,-48.4747,-48.4747,-48.4747,-48.4747,-46.6685 0|0:16:16,0,0,0,0,0,0:16:618:0,0,0,0,0,0:0,0,0,0,0,0:0,-4.81648,-55.9547,-4.81648,-55.9547,-55.9547,-4.81648,-55.9547,-55.9547,-55.9547,-4.81648,-55.9547,-55.9547,-55.9547,-55.9547,-4.81648,-55.9547,-55.9547,-55.9547,-55.9547,-55.9547,-4.81648,-55.9547,-55.9547,-55.9547,-55.9547,-55.9547,-55.9547 0|0:22:19,0,0,0,0,3,0:19:740:0,0,0,0,3,0:0,0,0,0,121,0:-4.65754,-10.3771,-71.1804,-10.3771,-71.1804,-71.1804,-10.3771,-71.1804,-71.1804,-71.1804,-10.3771,-71.1804,-71.1804,-71.1804,-71.1804,0,-61.2043,-61.2043,-61.2043,-61.2043,-60.3012,-10.3771,-71.1804,-71.1804,-71.1804,-71.1804,-61.2043,-71.1804 0|0:9:7,0,0,2,0,0,0:7:279:0,0,2,0,0,0:0,0,81,0,0,0:-4.97646,-7.08367,-30.0551,-7.08367,-30.0551,-30.0551,0,-23.3745,-23.3745,-22.7725,-7.08367,-30.0551,-30.0551,-23.3745,-30.0551,-7.08367,-30.0551,-30.0551,-23.3745,-30.0551,-30.0551,-7.08367,-30.0551,-30.0551,-23.3745,-30.0551,-30.0551,-30.0551 0|1:12:7,5,0,0,0,0,0:7:277:5,0,0,0,0,0:189,0,0,0,0,0:-13.7636,0,-21.688,-15.8708,-23.1931,-38.6789,-15.8708,-23.1931,-38.6789,-38.6789,-15.8708,-23.1931,-38.6789,-38.6789,-38.6789,-15.8708,-23.1931,-38.6789,-38.6789,-38.6789,-38.6789,-15.8708,-23.1931,-38.6789,-38.6789,-38.6789,-38.6789,-38.6789 0|0:13:6,2,3,0,2,0,0:6:240:2,3,0,2,0,0:76,112,0,81,0,0:-7.35415,-2.92899,-22.105,0,-13.5461,-18.8719,-9.16033,-22.7071,-19.775,-28.938,-2.47294,-16.0254,-13.0938,-22.2564,-21.6544,-9.16033,-22.7071,-19.775,-28.938,-22.2564,-28.938,-9.16033,-22.7071,-19.775,-28.938,-22.2564,-28.938,-28.938 dDocent_Contig_11255 21 . T A 95.0256 . AB=0.263158;ABP=12.2676;AC=1;AF=0.1;AN=10;AO=5;CIGAR=1X;DP=57;DPB=57;DPRA=2;EPP=13.8677;EPPR=115.927;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=183;QR=1802;RO=52;RPL=0;RPP=13.8677;RPPR=115.927;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=52;SRP=115.927;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:228:0:0:0,-2.10721,-20.8397 0/0:17:17,0:17:588:0:0:0,-5.11751,-53.2418 0/1:19:14,5:14:502:5:183:-11.1044,0,-39.7936 0/0:12:12,0:12:415:0:0:0,-3.61236,-37.6803 ./.:.:.:.:.:.:.:. 0/0:2:2,0:2:69:0:0:0,-0.60206,-6.55228 dDocent_Contig_11256 2 . A G 90.4943 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X1I1X;DP=3;DPB=4.5;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=57;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=97;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:3:0,3:0:0:3:97:-9.04889,-0.90309,0 dDocent_Contig_11257 130 . A G 241.413 . AB=0.179775;ABP=82.2812;AC=4;AF=0.333333;AN=12;AO=16;CIGAR=1X;DP=117;DPB=117;DPRA=1.58929;EPP=37.7539;EPPR=222.329;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.752475;PAO=0;PQA=0;PQR=0;PRO=0;QA=629;QR=4021;RO=101;RPL=0;RPP=37.7539;RPPR=222.329;RPR=16;RUN=1;SAF=0;SAP=37.7539;SAR=16;SRF=0;SRP=222.329;SRR=101;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:29:26,3:26:1038:3:123:-2.73492,0,-84.9837 0/1:15:12,3:12:451:3:105:-5.27715,0,-36.4083 0/1:15:8,7:8:321:7:279:-20.9655,0,-24.7416 0/0:8:8,0:8:325:0:0:0,-2.40824,-29.6196 0/1:30:27,3:27:1088:3:122:-2.34159,0,-89.1766 0/0:20:20,0:20:798:0:0:0,-6.0206,-72.1387 dDocent_Contig_11258 30 . C A 117.514 . AB=0.294118;ABP=9.26925;AC=1;AF=0.1;AN=10;AO=9;CIGAR=1X;DP=114;DPB=114;DPRA=4.39655;EPP=22.5536;EPPR=231.015;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=363;QR=4165;RO=105;RPL=0;RPP=22.5536;RPPR=231.015;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=105;SRP=231.015;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:563:0:0:0,-4.21442,-51.0129 0/0:68:64,4:64:2532:4:162:0,-5.50329,-213.052 0/1:17:12,5:12:472:5:201:-13.353,0,-37.7059 0/0:14:14,0:14:557:0:0:0,-4.21442,-50.4719 ./.:.:.:.:.:.:.:. 0/0:1:1,0:1:41:0:0:0,-0.30103,-4.09457 dDocent_Contig_11259 56 . C T 35.0462 . AB=0.114754;ABP=81.6461;AC=1;AF=0.0833333;AN=12;AO=24;CIGAR=2X;DP=358;DPB=358;DPRA=0;EPP=55.1256;EPPR=728.282;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.371257;PAO=0;PQA=0;PQR=0;PRO=0;QA=839;QR=12772;RO=334;RPL=0;RPP=55.1256;RPPR=21.9684;RPR=24;RUN=1;SAF=0;SAP=55.1256;SAR=24;SRF=194;SRP=21.9684;SRR=140;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:53:51,2:51:1954:2:70:0,-9.30726,-169.44 0|0:69:65,4:65:2510:4:139:0,-7.92145,-213.226 0|0:45:43,2:43:1640:2:71:0,-6.80429,-141.097 0|1:61:54,7:54:2038:7:256:-5.02735,0,-165.29 0|0:55:50,5:50:1929:5:161:0,-1.74974,-159.029 0|0:75:71,4:71:2701:4:142:0,-9.44798,-230.127 dDocent_Contig_11260 97 . T C 289.409 . AB=0.225352;ABP=49.5287;AC=2;AF=0.166667;AN=12;AO=18;CIGAR=1X;DP=197;DPB=197;DPRA=1.16484;EPP=42.0968;EPPR=391.704;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.777778;PAIREDR=0.73743;PAO=0;PQA=0;PQR=0;PRO=0;QA=658;QR=6472;RO=179;RPL=9;RPP=3.0103;RPPR=14.6683;RPR=9;RUN=1;SAF=9;SAP=3.0103;SAR=9;SRF=105;SRP=14.6683;SRR=74;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:864:0:0:0,-7.22472,-78.0764 0/1:50:38,12:38:1374:12:437:-24.6189,0,-108.899 0/0:35:33,2:33:1193:2:71:0,-3.79497,-100.929 0/1:21:17,4:17:613:4:150:-7.54382,0,-49.1783 0/0:50:50,0:50:1824:0:0:0,-15.0515,-164.426 0/0:17:17,0:17:604:0:0:0,-5.11751,-54.6871 dDocent_Contig_11261 119 . A T 490.11 . AB=0.218543;ABP=106.91;AC=3;AF=0.25;AN=12;AO=37;CIGAR=1X;DP=244;DPB=244;DPRA=2.36842;EPP=83.3548;EPPR=452.505;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.027027;PAIREDR=0.449275;PAO=0;PQA=0;PQR=0;PRO=0;QA=1237;QR=7230;RO=207;RPL=0;RPP=83.3548;RPPR=452.505;RPR=37;RUN=1;SAF=0;SAP=83.3548;SAR=37;SRF=0;SRP=452.505;SRR=207;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:39,1:39:1366:1:35:0,-8.54257,-119.74 0/0:19:19,0:19:670:0:0:0,-5.71957,-60.6264 0/1:44:33,11:33:1158:11:337:-17.379,0,-91.2806 0/0:34:31,3:31:1088:3:105:0,-0.438925,-88.4341 0/1:49:41,8:41:1440:8:276:-10.4247,0,-115.144 0/1:58:44,14:44:1508:14:484:-26.4289,0,-118.547 dDocent_Contig_11265 75 . C T 2309.15 . AB=0.493976;ABP=3.06262;AC=4;AF=0.5;AN=8;AO=82;CIGAR=1X;DP=166;DPB=166;DPRA=0;EPP=181.071;EPPR=185.414;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3177;QR=3255;RO=84;RPL=82;RPP=181.071;RPPR=185.414;RPR=0;RUN=1;SAF=82;SAP=181.071;SAR=0;SRF=84;SRP=185.414;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:21,5:21:799:5:195:-10.0974,0,-64.406 0/1:83:28,55:28:1086:55:2094:-163.706,0,-73.0589 0/1:35:15,20:15:596:20:808:-62.5003,0,-43.4421 0/1:22:20,2:20:774:2:80:-0.968915,0,-63.3524 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11266 12 . C T 35.4787 . AB=0.222222;ABP=9.04217;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=161;DPB=161;DPRA=2.85417;EPP=20.3821;EPPR=335.246;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=324;QR=6100;RO=153;RPL=0;RPP=20.3821;RPPR=335.246;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=153;SRP=335.246;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:598:0:0:0,-4.51545,-54.1574 0/1:9:7,2:7:285:2:82:-5.07041,0,-23.3151 0/0:9:9,0:9:361:0:0:0,-2.70927,-32.8535 0/0:15:14,1:14:534:1:40:0,-0.519771,-44.3895 0/0:76:73,3:73:2909:3:122:0,-11.5058,-250.534 0/0:37:35,2:35:1413:2:80:0,-3.54632,-119.827 dDocent_Contig_11267 7 . T A 647.517 . AB=0.20339;ABP=138.267;AC=4;AF=0.333333;AN=12;AO=38;CIGAR=1X;DP=293;DPB=293;DPRA=0.745161;EPP=85.5263;EPPR=554.564;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0;PAIREDR=0.996063;PAO=0;PQA=0;PQR=0;PRO=0;QA=1449;QR=9698;RO=254;RPL=0;RPP=85.5263;RPPR=554.564;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=254;SRP=554.564;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:20,15:20:768:15:577:-41.7362,0,-58.9112 0/1:38:31,7:31:1198:7:265:-12.7706,0,-96.6772 0/0:62:61,0:61:2313:0:0:0,-18.3628,-208.272 0/1:23:20,3:20:768:3:108:-3.15044,0,-62.5243 0/0:54:52,2:52:1990:2:73:0,-9.32452,-172.408 0/1:81:70,11:70:2661:11:426:-14.3113,0,-215.303 dDocent_Contig_11268 12 . A T 368.352 . AB=0.333333;ABP=3.73412;AC=3;AF=0.25;AN=12;AO=13;CIGAR=1X;DP=121;DPB=121;DPRA=0.283019;EPP=31.2394;EPPR=237.529;GTI=0;LEN=1;MEANALT=1;MQM=35.1538;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.990741;PAO=0;PQA=0;PQR=0;PRO=0;QA=528;QR=4284;RO=108;RPL=0;RPP=31.2394;RPPR=237.529;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=108;SRP=237.529;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1634:0:0:0,-12.3422,-147.285 0/0:28:28,0:28:1119:0:0:0,-8.42884,-100.993 0/0:13:13,0:13:513:0:0:0,-3.91339,-46.5167 0/0:24:24,0:24:945:0:0:0,-7.22472,-85.3501 1/1:12:0,12:0:0:12:487:-36.3165,-3.61236,0 0/1:3:2,1:2:73:1:41:-1.77999,0,-6.02761 dDocent_Contig_11269 28 . G A 271.305 . AB=0.161905;ABP=107.262;AC=3;AF=0.25;AN=12;AO=19;CIGAR=1X;DP=190;DPB=190;DPRA=1.15714;EPP=44.2683;EPPR=374.332;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.947368;PAIREDR=0.74269;PAO=0;PQA=0;PQR=0;PRO=0;QA=765;QR=6849;RO=171;RPL=0;RPP=44.2683;RPPR=374.332;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=171;SRP=374.332;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:32,3:32:1294:3:123:-0.928738,0,-106.187 0/0:41:40,1:40:1578:1:41:0,-8.24766,-138.163 0/0:28:28,0:28:1127:0:0:0,-8.42884,-101.713 0/0:16:15,1:15:594:1:38:0,-1.01921,-49.9981 0/1:41:32,9:32:1289:9:358:-20.2411,0,-103.926 0/1:29:24,5:24:967:5:205:-10.1051,0,-78.5993 dDocent_Contig_11270 39 . C G 218.484 . AB=0.272727;ABP=17.8158;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=212;DPB=212;DPRA=0.921788;EPP=22.5536;EPPR=443.819;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.777778;PAIREDR=0.965517;PAO=0;PQA=0;PQR=0;PRO=0;QA=366;QR=8096;RO=203;RPL=0;RPP=22.5536;RPPR=443.819;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=203;SRP=443.819;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:48,0:48:1887:0:0:0,-14.4494,-170.032 0/0:36:36,0:36:1449:0:0:0,-10.8371,-130.659 0/0:65:65,0:65:2603:0:0:0,-19.5669,-234.39 0/1:33:24,9:24:956:9:366:-23.3712,0,-76.4036 0/0:27:27,0:27:1080:0:0:0,-8.12781,-97.4851 0/0:3:3,0:3:121:0:0:0,-0.90309,-11.2802 dDocent_Contig_11271 105 . T A 34.1442 . AB=0.122449;ABP=63.6786;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=105;DPB=105;DPRA=1.75;EPP=16.0391;EPPR=217.986;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.606061;PAO=0;PQA=0;PQR=0;PRO=0;QA=229;QR=3874;RO=99;RPL=6;RPP=16.0391;RPPR=217.986;RPR=0;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=217.986;SRR=99;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:14:12,2:12:479:2:66:-2.05389,0,-39.2468 0/0:9:9,0:9:356:0:0:0,-2.70927,-32.3997 0/0:14:14,0:14:533:0:0:0,-4.21442,-48.2934 0/1:35:31,4:31:1223:4:163:-4.52238,0,-99.8096 0/0:16:16,0:16:611:0:0:0,-4.81648,-55.3222 0/0:17:17,0:17:672:0:0:0,-5.11751,-60.8101 dDocent_Contig_11272 7 . T C 5356.27 . AB=0.328149;ABP=167.951;AC=4;AF=0.333333;AN=12;AO=213;CIGAR=1X3M1X;DP=830;DPB=830;DPRA=1.20678;EPP=465.534;EPPR=1286.35;GTI=0;LEN=1;MEANALT=2.6;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994924;PAO=0;PQA=0;PQR=0;PRO=0;QA=8187;QR=22741;RO=591;RPL=0;RPP=465.534;RPPR=1286.35;RPR=213;RUN=1;SAF=213;SAP=465.534;SAR=0;SRF=591;SRP=1286.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:122:59,59:59:2264:59:2272:-168.767,0,-168.049 0|1:198:150,42:150:5782:42:1619:-87.773,0,-462.133 0|1:150:83,60:83:3212:60:2311:-164.767,0,-245.787 0|1:173:116,50:116:4447:50:1907:-121.541,0,-349.953 0|0:118:117,0:117:4479:0:0:0,-35.2205,-402.818 0|0:69:66,2:66:2557:2:78:0,-13.2631,-223.012 dDocent_Contig_11273 7 . T A 12521 . AB=0.0407925;ABP=1574.53;AC=2;AF=0.166667;AN=12;AO=35;CIGAR=2X4M1X2M1X1M1X;DP=858;DPB=864.75;DPRA=0;EPP=79.0118;EPPR=137.642;GTI=0;LEN=1;MEANALT=13.5;MQM=59.1143;MQMR=60;NS=6;NUMALT=6;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1313;QR=2392;RO=62;RPL=0;RPP=79.0118;RPPR=137.642;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=62;SRP=137.642;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:124:10,8,12,41,17,5,13:10:392:8,12,41,17,5,13:300,443,1532,655,187,504:-143.707,-122.145,-151.976,-112.55,-120.216,-141.177,-21.5476,-29.2145,-19.6212,-41.4453,-92.9313,-100.598,-91.0032,0,-120.053,-131.431,-139.098,-129.503,-38.5012,-109.884,-162.165,-105.317,-112.983,-103.388,-12.3855,-83.7692,-122.269,-133.642 0|0:133:14,1,16,61,7,4,7:14:526:1,16,61,7,4,7:35,567,2233,266,154,265:-175.896,-177.263,-220.047,-136.406,-176.643,-174.674,-0.6142,-40.8532,0,-25.3379,-158.294,-198.532,-157.675,-21.8838,-199.272,-167.467,-207.705,-166.848,-31.0573,-188.737,-209.349,-158.392,-198.63,-157.772,-21.9815,-179.661,-188.834,-199.37 0|0:175:9,7,27,80,11,1,17:9:351:7,27,80,11,1,17:252,999,2981,405,38,635:-288.209,-270.629,-297.375,-213.809,-222.374,-234.534,-48.2524,-56.8185,0,-53.0247,-257.806,-266.37,-209.55,-43.9942,-283.347,-287.802,-296.366,-239.546,-73.9911,-283.543,-316.354,-238.937,-247.502,-190.682,-25.1251,-234.678,-264.675,-262.673 0|0:134:1,5,20,60,13,9,17:1:39:5,20,60,13,9,17:178,700,2183,499,343,675:-229.802,-215.6,-217.301,-176.505,-165.208,-173.691,-52.3692,-41.0726,-1.98515,-37.5135,-189.143,-177.846,-138.751,-14.6138,-188.436,-201.969,-190.672,-151.578,-27.4409,-164.215,-202.466,-174.532,-163.234,-124.14,0,-136.777,-149.603,-172.62 0|1:137:12,2,14,66,13,7,8:12:468:2,14,66,13,7,8:72,501,2419,482,259,309:-194.223,-191.962,-229.831,-159.378,-191.976,-193.635,-0.961335,-33.5615,-0.981897,-19.5673,-158.4,-190.998,-158.415,0,-192.959,-176.648,-209.246,-176.663,-18.2482,-175.685,-213.013,-172.464,-205.062,-172.478,-14.0627,-171.5,-189.749,-208.528 0|0:155:16,7,21,77,3,9,13:16:616:7,21,77,3,9,13:268,690,2867,107,332,507:-231.455,-214.276,-262.748,-184.082,-212.665,-228.338,-1.59781,-30.1843,0,-29.0011,-227.551,-256.134,-225.939,-43.4601,-277.226,-209.121,-237.705,-207.51,-25.0292,-250.979,-256.99,-194.597,-223.181,-192.986,-10.5032,-236.456,-218.026,-241.263 dDocent_Contig_11275 14 . A G 1971.9 . AB=0.389744;ABP=23.6003;AC=6;AF=0.5;AN=12;AO=76;CIGAR=1X;DP=195;DPB=195;DPRA=0;EPP=168.042;EPPR=261.416;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.565789;PAIREDR=0.563025;PAO=0;PQA=0;PQR=0;PRO=0;QA=2945;QR=4601;RO=119;RPL=0;RPP=168.042;RPPR=261.416;RPR=76;RUN=1;SAF=76;SAP=168.042;SAR=0;SRF=119;SRP=261.416;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:17,15:17:659:15:591:-43.8984,0,-50.0125 0/1:40:24,16:24:928:16:627:-44.7205,0,-71.7917 0/1:23:17,6:17:658:6:236:-14.6888,0,-52.632 0/1:25:17,8:17:659:8:297:-19.5528,0,-52.1197 0/1:42:25,17:25:965:17:643:-45.551,0,-74.5067 0/1:33:19,14:19:732:14:551:-40.0002,0,-56.2769 dDocent_Contig_11276 20 . T C 1270.57 . AB=0.408451;ABP=8.17902;AC=5;AF=0.416667;AN=12;AO=43;CIGAR=1X;DP=114;DPB=114;DPRA=1.53571;EPP=96.3836;EPPR=157.185;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.860465;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1737;QR=2797;RO=71;RPL=0;RPP=96.3836;RPPR=157.185;RPR=43;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=71;SRP=157.185;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:19,6:19:758:6:236:-14.0854,0,-61.0139 0/1:25:16,9:16:646:9:368:-25.9596,0,-50.9474 0/1:21:7,14:7:279:14:563:-44.687,0,-19.1572 1/1:15:1,14:1:41:14:570:-47.547,-0.420883,0 0/0:23:23,0:23:871:0:0:0,-6.92369,-78.6842 0/0:5:5,0:5:202:0:0:0,-1.50515,-18.5619 dDocent_Contig_11277 12 . G T 223.747 . AB=0.166667;ABP=43.5445;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=2X;DP=75;DPB=75;DPRA=5.25;EPP=18.2106;EPPR=122.441;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.428571;PAIREDR=0.8;PAO=0;PQA=0;PQR=0;PRO=0;QA=282;QR=2172;RO=55;RPL=0;RPP=18.2106;RPPR=122.441;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=55;SRP=122.441;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:19:13,2,4:13:520:2,4:80,163:-9.53888,-6.86479,-49.0907,0,-36.2436,-41.6295 0|0:17:15,0,2:15:605:0,2:0,80:-2.47407,-6.98951,-56.8632,0,-50.2737,-49.6716 0|0:10:8,0,2:8:304:0,2:0,74:-4.01547,-6.42371,-31.35,0,-25.298,-24.696 0|1:23:14,5,3:14:550:5,3:202,121:-12.4382,0,-43.7195,-6.67895,-35.2489,-51.0015 0|0:2:1,0,1:1:38:0,1:0,37:-3.09577,-3.3968,-6.51828,0,-3.49624,-3.19521 0|0:4:4,0,0:4:155:0,0:0,0:0,-1.20412,-14.3245,-1.20412,-14.3245,-14.3245 dDocent_Contig_11278 14 . G T 102.017 . AB=0.152174;ABP=51.3492;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=155;DPB=155;DPRA=2.11009;EPP=18.2106;EPPR=324.388;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.959459;PAO=0;PQA=0;PQR=0;PRO=0;QA=280;QR=5843;RO=148;RPL=0;RPP=18.2106;RPPR=324.388;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=148;SRP=324.388;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1031:0:0:0,-8.12781,-93.0765 0/0:19:19,0:19:755:0:0:0,-5.71957,-68.2715 0/0:14:14,0:14:555:0:0:0,-4.21442,-50.2889 0/0:36:36,0:36:1443:0:0:0,-10.8371,-130.121 0/0:13:13,0:13:514:0:0:0,-3.91339,-46.6063 0/1:46:39,7:39:1545:7:280:-11.7246,0,-125.45 dDocent_Contig_11279 51 . C T 32.1872 . AB=0.133333;ABP=38.0434;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=157;DPB=157;DPRA=1.90741;EPP=22.5536;EPPR=324.388;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.939189;PAO=0;PQA=0;PQR=0;PRO=0;QA=315;QR=5846;RO=148;RPL=9;RPP=22.5536;RPPR=324.388;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=148;SRP=324.388;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:27,1:27:1089:1:40:0,-4.43316,-94.2999 0/1:30:26,4:26:1017:4:149:-4.74124,0,-82.7931 0/0:46:46,0:46:1792:0:0:0,-13.8474,-161.495 0/0:45:41,4:41:1623:4:126:0,-1.89657,-134.645 0/0:4:4,0:4:162:0:0:0,-1.20412,-14.967 0/0:4:4,0:4:163:0:0:0,-1.20412,-15.0584 dDocent_Contig_11280 10 . T G 1288.13 . AB=0.455446;ABP=4.75178;AC=3;AF=0.25;AN=12;AO=48;CIGAR=1X;DP=189;DPB=189;DPRA=1.10169;EPP=107.241;EPPR=309.188;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.604167;PAIREDR=0.539007;PAO=0;PQA=0;PQR=0;PRO=0;QA=1893;QR=5684;RO=141;RPL=0;RPP=107.241;RPPR=309.188;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=141;SRP=309.188;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:1049:0:0:0,-7.82678,-94.6999 0/0:33:33,0:33:1334:0:0:0,-9.93399,-120.319 0/1:53:34,19:34:1369:19:735:-50.5094,0,-107.512 0/0:29:27,2:27:1084:2:77:0,-1.42167,-90.5377 0/1:25:10,15:10:406:15:599:-46.7209,0,-29.3747 0/1:23:11,12:11:442:12:482:-36.8047,0,-33.2117 dDocent_Contig_11282 24 . T C 6624.82 . AB=0.262626;ABP=99.915;AC=2;AF=0.166667;AN=12;AO=52;CIGAR=1X2M1X;DP=291;DPB=291;DPRA=1.06452;EPP=115.927;EPPR=128.956;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2056;QR=2283;RO=58;RPL=0;RPP=115.927;RPPR=128.956;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=58;SRP=128.956;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:32:7,19,6:7:274:19,6:748,246:-59.4128,0,-16.8,-41.2117,-2.20662,-61.9344 0|0:86:29,8,49:29:1145:8,49:319,1974:-153.974,-136.434,-228.238,0,-67.9408,-79.4618 0|0:36:9,6,21:9:353:6,21:241,837:-66.2042,-49.0533,-76.274,0,-9.15985,-22.7015 0|1:44:13,19,12:13:511:19,12:748,482:-57.6109,0,-36.3078,-21.8032,-2.30534,-60.2225 0|0:67:0,0,67:0:0:0,67:0,2654:-238.975,-238.975,-238.975,-20.169,-20.169,0 0|0:26:0,0,26:0:0:0,26:0,1036:-93.5268,-93.5268,-93.5268,-7.82678,-7.82678,0 dDocent_Contig_11283 8 . A T 67.677 . AB=0.127273;ABP=69.3784;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=212;DPB=212;DPRA=1.3125;EPP=20.3821;EPPR=445.991;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.375;PAIREDR=0.563725;PAO=0;PQA=0;PQR=0;PRO=0;QA=310;QR=7737;RO=204;RPL=0;RPP=20.3821;RPPR=445.991;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=204;SRP=445.991;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:986:0:0:0,-7.82678,-89.0531 0/1:55:48,7:48:1823:7:272:-8.29058,0,-147.768 0/0:28:28,0:28:1069:0:0:0,-8.42884,-96.513 0/0:29:28,1:28:1060:1:38:0,-4.9326,-91.9073 0/0:38:38,0:38:1441:0:0:0,-11.4391,-129.971 0/0:36:36,0:36:1358:0:0:0,-10.8371,-122.504 dDocent_Contig_11284 10 . T C 15090.4 . AB=0.1;ABP=44.7026;AC=4;AF=0.333333;AN=12;AO=411;CIGAR=1X2M1D3M1X;DP=524;DPB=472.5;DPRA=3.60163;EPP=895.485;EPPR=157.185;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=16123;QR=2800;RO=71;RPL=0;RPP=895.485;RPPR=157.185;RPR=411;RUN=1;SAF=411;SAP=895.485;SAR=0;SRF=71;SRP=157.185;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:14:10,0,0,4:10:398:0,0,4:0,0,158:-10.3856,-13.3959,-46.1698,-13.3959,-46.1698,-46.1698,0,-33.1694,-33.1694,-31.9653 0|0:30:14,3,10,3:14:546:3,10,3:109,403,123:-29.0134,-24.3367,-68.3037,0,-35.9857,-41.8697,-23.0725,-59.0529,-34.7241,-67.0451 0|0:26:8,0,12,6:8:312:0,12,6:0,457,244:-35.0557,-37.464,-63.1093,0,-25.6357,-22.0233,-17.3289,-42.9777,-5.50214,-41.1716 0|0:41:39,0,1,1:39:1544:0,1,1:0,40,41:0,-11.7402,-138.804,-8.45003,-135.509,-135.208,-8.35114,-135.42,-132.124,-135.119 1|1:201:0,199,0,2:0:0:199,0,2:7812,0,77:-702.376,-59.905,0,-702.376,-59.905,-702.376,-696.055,-53.1988,-696.055,-695.453 1|1:212:0,209,0,2:0:0:209,0,2:8202,0,82:-737.431,-62.9153,0,-737.431,-62.9153,-737.431,-730.662,-56.1207,-730.662,-730.06 dDocent_Contig_11285 48 . T C 1636.16 . AB=0.343434;ABP=24.0889;AC=5;AF=0.5;AN=10;AO=56;CIGAR=1X;DP=172;DPB=172;DPRA=0.593137;EPP=124.613;EPPR=254.901;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2193;QR=4628;RO=116;RPL=0;RPP=124.613;RPPR=254.901;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=116;SRP=254.901;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:22:0,22:0:0:22:889:-80.3143,-6.62266,0 0/1:21:11,10:11:433:10:399:-29.9469,0,-33.0012 0/1:56:39,17:39:1578:17:624:-39.6168,0,-125.395 0/1:22:15,7:15:602:7:281:-19.0393,0,-47.8958 ./.:.:.:.:.:.:.:. 0/0:51:51,0:51:2015:0:0:0,-15.3525,-181.54 dDocent_Contig_11287 15 . A T 59.4574 . AB=0.117647;ABP=67.7713;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=359;DPB=359;DPRA=2.39516;EPP=39.9253;EPPR=745.654;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.97076;PAO=0;PQA=0;PQR=0;PRO=0;QA=693;QR=13653;RO=342;RPL=0;RPP=39.9253;RPPR=745.654;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=342;SRP=745.654;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:51:45,6:45:1796:6:246:-7.16759,0,-146.498 0/0:98:93,5:93:3728:5:202:0,-10.9389,-316.962 0/0:44:42,2:42:1678:2:82:0,-5.46564,-143.465 0/0:104:100,4:100:3985:4:163:0,-16.2487,-343.582 0/0:22:22,0:22:882:0:0:0,-6.62266,-79.6835 0/0:40:40,0:40:1584:0:0:0,-12.0412,-142.788 dDocent_Contig_11288 7 . T A 227.16 . AB=0.233333;ABP=21.5402;AC=5;AF=0.5;AN=10;AO=11;CIGAR=1X;DP=42;DPB=42;DPRA=1.0625;EPP=26.8965;EPPR=70.3259;GTI=0;LEN=1;MEANALT=1;MQM=45.5455;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0.363636;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=423;QR=1191;RO=31;RPL=0;RPP=26.8965;RPPR=70.3259;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=31;SRP=70.3259;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:8:8,0:8:305:0:0:0,-2.40824,-27.8099 0/1:11:7,4:7:269:4:156:-10.005,0,-21.2633 0/1:13:11,2:11:424:2:78:-1.16622,0,-34.6008 0/1:6:5,1:5:193:1:39:-2.06725,0,-15.9352 ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:150:-13.8654,-1.20412,0 dDocent_Contig_11289 23 . A G 251.73 . AB=0.30303;ABP=14.1309;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=250;DPB=250;DPRA=0.760369;EPP=24.725;EPPR=524.164;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.7292;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.908333;PAO=0;PQA=0;PQR=0;PRO=0;QA=403;QR=9632;RO=240;RPL=0;RPP=24.725;RPPR=524.164;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=240;SRP=524.164;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:1170:0:0:0,-8.72987,-105.575 0/0:65:65,0:65:2606:0:0:0,-19.5669,-234.668 0/1:33:23,10:23:908:10:403:-26.6959,0,-72.0939 0/0:59:59,0:59:2369:0:0:0,-17.7608,-213.359 0/0:35:35,0:35:1415:0:0:0,-10.536,-126.291 0/0:29:29,0:29:1164:0:0:0,-8.72987,-105.038 dDocent_Contig_11290 22 . T C 266.611 . AB=0.297297;ABP=16.2152;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=205;DPB=205;DPRA=0.830357;EPP=31.2394;EPPR=385.913;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9583;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.979167;PAO=0;PQA=0;PQR=0;PRO=0;QA=482;QR=7323;RO=192;RPL=0;RPP=31.2394;RPPR=419.933;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=188;SRP=385.913;SRR=4;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:51:51,0:51:1889:0:0:0,-15.3525,-170.238 0/0:23:23,0:23:863:0:0:0,-6.92369,-77.9798 0/0:25:24,1:24:923:1:10:0,-6.52575,-82.3724 0/0:38:38,0:38:1458:0:0:0,-11.4391,-131.484 0/1:37:26,11:26:1019:11:433:-28.184,0,-80.8744 0/0:31:30,1:30:1171:1:39:0,-5.43537,-101.785 dDocent_Contig_11291 27 . C A 1363.24 . AB=0.297436;ABP=72.5086;AC=6;AF=0.5;AN=12;AO=58;CIGAR=1X;DP=195;DPB=195;DPRA=0;EPP=75.4926;EPPR=300.502;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.12069;PAIREDR=0.423358;PAO=0;PQA=0;PQR=0;PRO=0;QA=2268;QR=5428;RO=137;RPL=0;RPP=128.956;RPPR=300.502;RPR=58;RUN=1;SAF=51;SAP=75.4926;SAR=7;SRF=137;SRP=300.502;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:32,6:32:1276:6:237:-10.2635,0,-103.673 0/1:43:30,13:30:1159:13:501:-32.4831,0,-91.6341 0/1:33:22,11:22:860:11:435:-29.5694,0,-67.7689 0/1:18:10,8:10:401:8:324:-24.1107,0,-31.0282 0/1:41:32,9:32:1296:9:338:-18.4225,0,-104.559 0/1:22:11,11:11:436:11:433:-32.6972,0,-32.9712 dDocent_Contig_11292 48 . G A 98.2588 . AB=0.193548;ABP=28.2974;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=77;DPB=77;DPRA=1.34783;EPP=16.0391;EPPR=157.185;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.985915;PAO=0;PQA=0;PQR=0;PRO=0;QA=240;QR=2810;RO=71;RPL=0;RPP=16.0391;RPPR=157.185;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=71;SRP=157.185;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:17:13,4:13:498:4:159:-9.57393,0,-40.0389 0/0:18:18,0:18:701:0:0:0,-5.41854,-63.4058 0/1:14:12,2:12:484:2:81:-3.47131,0,-39.6972 0/0:13:13,0:13:522:0:0:0,-3.91339,-47.3273 0/0:4:4,0:4:161:0:0:0,-1.20412,-14.8753 0/0:11:11,0:11:444:0:0:0,-3.31133,-40.3162 dDocent_Contig_11293 29 . G A 1433.31 . AB=0.383117;ABP=21.2845;AC=6;AF=0.5;AN=12;AO=59;CIGAR=1X;DP=154;DPB=154;DPRA=0;EPP=131.127;EPPR=209.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.932203;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2209;QR=3690;RO=95;RPL=0;RPP=131.127;RPPR=209.3;RPR=59;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=95;SRP=209.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:21,9:21:828:9:335:-21.4688,0,-65.8088 0/1:15:4,11:4:152:11:423:-33.908,0,-9.5339 0/1:21:8,13:8:296:13:491:-38.213,0,-20.67 0/1:64:46,18:46:1785:18:664:-40.8222,0,-141.627 0/1:7:5,2:5:196:2:76:-5.10746,0,-15.9076 0/1:17:11,6:11:433:6:220:-15.0337,0,-34.2071 dDocent_Contig_11294 54 . A G 165.516 . AB=0.291667;ABP=12.0581;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=173;DPB=173;DPRA=0.883333;EPP=20.3821;EPPR=361.303;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.933333;PAO=0;PQA=0;PQR=0;PRO=0;QA=317;QR=6371;RO=165;RPL=8;RPP=20.3821;RPPR=361.303;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=165;SRP=361.303;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:28,1:28:1091:1:40:0,-4.73419,-94.4841 0/1:24:17,7:17:664:7:277:-18.0745,0,-52.8653 0/0:22:22,0:22:816:0:0:0,-6.62266,-73.738 0/0:47:47,0:47:1784:0:0:0,-14.1484,-160.768 0/0:22:22,0:22:867:0:0:0,-6.62266,-78.3355 0/0:29:29,0:29:1149:0:0:0,-8.72987,-103.691 dDocent_Contig_11296 19 . A C 144.719 . AB=0.233333;ABP=21.5402;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=158;DPB=158;DPRA=1.59016;EPP=24.725;EPPR=320.045;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.739726;PAO=0;PQA=0;PQR=0;PRO=0;QA=397;QR=5783;RO=146;RPL=0;RPP=24.725;RPPR=320.045;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=146;SRP=320.045;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:24,1:24:960:1:41:0,-3.43118,-82.607 0/0:42:38,2:38:1519:2:82:0,-4.66107,-129.184 0/0:9:9,0:9:356:0:0:0,-2.70927,-32.3992 0/1:30:23,7:23:892:7:274:-15.9947,0,-71.5502 0/0:22:22,0:22:838:0:0:0,-6.62266,-75.722 0/0:30:30,0:30:1218:0:0:0,-9.0309,-109.89 dDocent_Contig_11297 209 . N G 181.973 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=8.07091;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=198;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:198:-18.1972,-1.50515,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11298 7 . T A 999.353 . AB=0.288591;ABP=60.8531;AC=4;AF=0.333333;AN=12;AO=44;CIGAR=1X;DP=199;DPB=199;DPRA=1.45833;EPP=98.5551;EPPR=339.589;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1691;QR=5945;RO=155;RPL=0;RPP=98.5551;RPPR=339.589;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=155;SRP=339.589;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:16,15:16:617:15:579:-43.1208,0,-46.5377 0/1:43:29,14:29:1125:14:541:-36.0914,0,-88.6068 0/1:51:39,12:39:1470:12:455:-25.944,0,-117.217 0/1:24:22,2:22:851:2:77:-0.0844219,0,-69.6875 0/0:24:24,0:24:918:0:0:0,-7.22472,-82.9371 0/0:26:25,1:25:964:1:39:0,-3.93022,-83.1775 dDocent_Contig_11299 153 . C T 133.519 . AB=0.26087;ABP=14.4341;AC=1;AF=0.125;AN=8;AO=6;CIGAR=1X;DP=129;DPB=129;DPRA=0.650943;EPP=16.0391;EPPR=270.101;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=240;QR=4910;RO=123;RPL=0;RPP=16.0391;RPPR=270.101;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=270.101;SRR=123;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:46:46,0:46:1852:0:0:0,-13.8474,-166.882 0/0:22:22,0:22:887:0:0:0,-6.62266,-80.1388 0/0:38:38,0:38:1524:0:0:0,-11.4391,-137.401 0/1:23:17,6:17:647:6:240:-15.0508,0,-51.6187 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11300 8 . A C 887.688 . AB=0.0588235;ABP=60.4905;AC=0;AF=0;AN=12;AO=2;CIGAR=1X2M11I2M;DP=496;DPB=662;DPRA=0.290598;EPP=7.35324;EPPR=917.2;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=80;QR=16281;RO=421;RPL=0;RPP=7.35324;RPPR=917.2;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=421;SRP=917.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:70:67,0,3,0,0:67:2600:0,3,0,0:0,109,0,0:0,-20.169,-233.815,-10.9072,-224.917,-224.014,-20.169,-233.815,-224.917,-233.815,-20.169,-233.815,-224.917,-233.815,-233.815 0|0:125:111,0,12,2,0:111:4263:0,12,2,0:0,471,71,0:-5.35284,-38.7672,-388.687,0,-349.951,-346.338,-32.9875,-382.902,-344.166,-382.3,-38.7672,-388.687,-349.951,-382.902,-388.687 0|0:164:149,0,14,0,0:149:5777:0,14,0,0:0,500,0,0:0,-44.8535,-519.49,-4.13238,-478.741,-474.527,-44.8535,-519.49,-478.741,-519.49,-44.8535,-519.49,-478.741,-519.49,-519.49 0|0:83:73,0,10,0,0:73:2830:0,10,0,0:0,383,0,0:-9.83324,-31.8084,-264.311,0,-232.886,-229.876,-31.8084,-264.311,-232.886,-264.311,-31.8084,-264.311,-232.886,-264.311,-264.311 0|0:34:12,2,18,0,2:12:468:2,18,0,2:80,674,0,66:-51.5851,-48.6046,-86.4789,0,-31.8951,-33.069,-55.1975,-87.081,-38.4876,-93.6724,-49.8661,-81.7484,-33.1595,-88.3398,-87.7377 0|0:20:9,0,11,0,0:9:343:0,11,0,0:0,388,0,0:-29.2194,-31.9287,-60.0776,0,-28.517,-25.2056,-31.9287,-60.0776,-28.517,-60.0776,-31.9287,-60.0776,-28.517,-60.0776,-60.0776 dDocent_Contig_11303 9 . A G 31.563 . AB=0.113636;ABP=60.0608;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=219;DPB=219;DPRA=1.29508;EPP=22.5536;EPPR=459.02;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.777778;PAIREDR=0.77619;PAO=0;PQA=0;PQR=0;PRO=0;QA=350;QR=8057;RO=210;RPL=0;RPP=22.5536;RPPR=459.02;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=210;SRP=459.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:43:41,2:41:1561:2:78:0,-5.54082,-133.352 0/0:38:37,1:37:1429:1:39:0,-7.54258,-124.993 0/1:44:39,5:39:1479:5:195:-4.67888,0,-120.138 0/0:33:32,1:32:1234:1:38:0,-6.13672,-107.556 0/0:25:25,0:25:969:0:0:0,-7.52575,-87.5235 0/0:36:36,0:36:1385:0:0:0,-10.8371,-124.934 dDocent_Contig_11304 68 . G C 124.417 . AB=0.357143;ABP=5.49198;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=87;DPB=87;DPRA=2.78261;EPP=18.2106;EPPR=176.728;GTI=0;LEN=1;MEANALT=1;MQM=43.7143;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=0.714286;PAIREDR=0.825;PAO=0;PQA=0;PQR=0;PRO=0;QA=273;QR=3129;RO=80;RPL=0;RPP=18.2106;RPPR=176.728;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=80;SRP=176.728;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:14:9,5:9:352:5:195:-13.6635,0,-27.8254 0/0:20:19,1:19:752:1:39:0,-4.42272,-66.4014 0/0:30:29,1:29:1120:1:39:0,-7.43302,-99.4717 0/0:12:12,0:12:459:0:0:0,-3.61236,-41.6521 0/0:6:6,0:6:242:0:0:0,-1.80618,-22.1569 0/0:5:5,0:5:204:0:0:0,-1.50515,-18.744 dDocent_Contig_11305 45 . A T 284.171 . AB=0.180851;ABP=86.1731;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1X;DP=333;DPB=333;DPRA=0.864754;EPP=3.86001;EPPR=39.3229;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.608696;PAIREDR=0.412903;PAO=0;PQA=0;PQR=0;PRO=0;QA=883;QR=11661;RO=310;RPL=0;RPP=52.9542;RPPR=676.167;RPR=23;RUN=1;SAF=13;SAP=3.86001;SAR=10;SRF=191;SRP=39.3229;SRR=119;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:63:59,4:59:2207:4:154:0,-4.73313,-184.584 0/1:53:42,11:42:1612:11:428:-22.9165,0,-129.364 0/1:41:35,6:35:1334:6:230:-8.72244,0,-107.989 0/0:54:52,2:52:1925:2:71:0,-9.51356,-166.737 0/0:63:63,0:63:2352:0:0:0,-18.9649,-211.872 0/0:59:59,0:59:2231:0:0:0,-17.7608,-200.999 dDocent_Contig_11306 52 . G T 92.3776 . AB=0.363636;ABP=4.78696;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=95;DPB=95;DPRA=1.06452;EPP=13.8677;EPPR=198.443;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.555556;PAO=0;PQA=0;PQR=0;PRO=0;QA=189;QR=3541;RO=90;RPL=5;RPP=13.8677;RPPR=198.443;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=90;SRP=198.443;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:11:7,4:7:281:4:149:-10.4596,0,-22.3508 0/0:35:35,0:35:1378:0:0:0,-10.536,-124.284 0/0:22:21,1:21:820:1:40:0,-2.62698,-70.1154 0/0:8:8,0:8:320:0:0:0,-2.40824,-29.1668 0/0:8:8,0:8:322:0:0:0,-2.40824,-29.3485 0/0:11:11,0:11:420:0:0:0,-3.31133,-38.148 dDocent_Contig_11307 107 . N A 78.8063 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=78;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:44:-4.17896,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11308 17 . G A 109.962 . AB=0.134021;ABP=115.86;AC=3;AF=0.25;AN=12;AO=16;CIGAR=1X;DP=182;DPB=182;DPRA=1.1;EPP=37.7539;EPPR=363.475;GTI=0;LEN=1;MEANALT=1;MQM=59.4375;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.6875;PAIREDR=0.96988;PAO=0;PQA=0;PQR=0;PRO=0;QA=605;QR=6594;RO=166;RPL=0;RPP=37.7539;RPPR=363.475;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=166;SRP=363.475;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:30,2:30:1196:2:77:0,-2.32476,-100.61 0/1:42:35,7:35:1375:7:251:-10.285,0,-111.365 0/0:28:28,0:28:1099:0:0:0,-8.42884,-99.191 0/1:27:24,3:24:942:3:123:-3.33698,0,-76.9409 0/0:25:24,1:24:972:1:36:0,-3.92747,-84.1775 0/1:28:25,3:25:1010:3:118:-2.57405,0,-82.7655 dDocent_Contig_11309 28 . A T 43.543 . AB=0.0956522;ABP=166.324;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=462;DPB=462;DPRA=1.59533;EPP=35.5824;EPPR=973.658;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997763;PAO=0;PQA=0;PQR=0;PRO=0;QA=608;QR=17866;RO=447;RPL=0;RPP=35.5824;RPPR=973.658;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=447;SRP=973.658;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:42:42,0:42:1669:0:0:0,-12.6433,-150.436 0/0:63:63,0:63:2534:0:0:0,-18.9649,-228.19 0/0:78:78,0:78:3151:0:0:0,-23.4803,-283.651 0/0:74:74,0:74:2872:0:0:0,-22.2762,-258.596 0/1:115:104,11:104:4164:11:446:-5.87716,0,-340.111 0/0:90:86,4:86:3476:4:162:0,-12.126,-297.898 dDocent_Contig_11311 29 . A G 67.2571 . AB=0.15;ABP=45.5712;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=102;DPB=102;DPRA=1.29032;EPP=16.0391;EPPR=211.472;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.958333;PAO=0;PQA=0;PQR=0;PRO=0;QA=238;QR=3822;RO=96;RPL=0;RPP=16.0391;RPPR=211.472;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=96;SRP=211.472;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:38,0:38:1509:0:0:0,-11.4391,-136.053 0/1:19:17,2:17:680:2:81:-1.96616,0,-55.8103 0/0:15:15,0:15:607:0:0:0,-4.51545,-54.9681 0/1:21:17,4:17:671:4:157:-8.18626,0,-54.3925 0/0:4:4,0:4:157:0:0:0,-1.20412,-14.5088 0/0:5:5,0:5:198:0:0:0,-1.50515,-18.1974 dDocent_Contig_11312 30 . C T 403.043 . AB=0.260274;ABP=39.4494;AC=4;AF=0.5;AN=8;AO=19;CIGAR=1X;DP=73;DPB=73;DPRA=0;EPP=44.2683;EPPR=120.27;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=754;QR=2103;RO=54;RPL=0;RPP=44.2683;RPPR=120.27;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=54;SRP=120.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:18,2:18:704:2:82:-1.75908,0,-57.6591 0/1:15:9,6:9:353:6:236:-17.0959,0,-27.6111 0/1:20:12,8:12:468:8:319:-23.0563,0,-36.4391 0/1:18:15,3:15:578:3:117:-5.49167,0,-46.9308 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11313 83 . G T 197.046 . AB=0.186667;ABP=66.9674;AC=3;AF=0.25;AN=12;AO=14;CIGAR=1X;DP=129;DPB=129;DPRA=1.38889;EPP=33.4109;EPPR=252.73;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.571429;PAIREDR=0.86087;PAO=0;PQA=0;PQR=0;PRO=0;QA=505;QR=4155;RO=115;RPL=14;RPP=33.4109;RPPR=252.73;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=115;SRP=252.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:243:0:0:0,-2.10721,-22.2067 0/1:28:25,3:25:905:3:101:-0.9942,0,-73.3396 0/1:20:14,6:14:509:6:213:-13.4886,0,-40.128 0/1:27:22,5:22:787:5:191:-9.43071,0,-63.0224 0/0:27:27,0:27:979:0:0:0,-8.12781,-88.4255 0/0:20:20,0:20:732:0:0:0,-6.0206,-66.209 dDocent_Contig_11316 73 . A G 968.988 . AB=0.255435;ABP=98.6023;AC=3;AF=0.25;AN=12;AO=49;CIGAR=1X;DP=270;DPB=270;DPRA=13;EPP=109.412;EPPR=482.906;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1806;QR=8067;RO=221;RPL=49;RPP=109.412;RPPR=482.906;RPR=0;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=221;SRP=482.906;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:24,8:24:813:8:288:-16.6338,0,-63.8424 0/1:82:67,15:67:2410:15:552:-25.3351,0,-192.463 0/0:76:74,2:74:2753:2:67:0,-16.5168,-241.596 0/1:70:46,24:46:1720:24:899:-60.1516,0,-133.99 0/0:4:4,0:4:140:0:0:0,-1.20412,-12.9433 0/0:6:6,0:6:231:0:0:0,-1.80618,-21.1577 dDocent_Contig_11317 23 . T A 203.895 . AB=0.32;ABP=10.0459;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=2X;DP=93;DPB=93;DPRA=1.83824;EPP=20.3821;EPPR=187.585;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.741176;PAO=0;PQA=0;PQR=0;PRO=0;QA=323;QR=3394;RO=85;RPL=0;RPP=20.3821;RPPR=187.585;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=85;SRP=187.585;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:29:29,0:29:1145:0:0:0,-8.72987,-103.329 0|1:25:17,8:17:693:8:323:-21.9123,0,-55.1723 0|0:8:8,0:8:325:0:0:0,-2.40824,-29.6196 0|0:14:14,0:14:557:0:0:0,-4.21442,-50.471 0|0:4:4,0:4:149:0:0:0,-1.20412,-13.7722 0|0:13:13,0:13:525:0:0:0,-3.91339,-47.5967 dDocent_Contig_11319 12 . G A 18231.7 . AB=0.423278;ABP=100.971;AC=6;AF=0.5;AN=12;AO=811;CIGAR=1X;DP=1916;DPB=1916;DPRA=0;EPP=1764.07;EPPR=2395.97;GTI=0;LEN=1;MEANALT=1.16667;MQM=44.8471;MQMR=59.9946;NS=6;NUMALT=1;ODDS=0;PAIRED=0.404439;PAIREDR=0.871143;PAO=0;PQA=0;PQR=0;PRO=0;QA=31957;QR=43892;RO=1102;RPL=0;RPP=1764.07;RPPR=2395.97;RPR=811;RUN=1;SAF=811;SAP=1764.07;SAR=0;SRF=1102;SRP=2395.97;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:272:151,121:151:6004:121:4723:-282.028,0,-458.262 0/1:343:183,160:183:7291:160:6274:-363.935,0,-552.597 0/1:257:114,140:114:4534:140:5534:-329.298,0,-331.116 0/1:314:181,133:181:7209:133:5263:-298.096,0,-553.932 0/1:383:238,145:238:9498:145:5722:-336.723,0,-738.93 0/1:347:235,112:235:9356:112:4441:-224.317,0,-737.013 dDocent_Contig_11321 39 . C T 180.231 . AB=0.176471;ABP=64.8334;AC=3;AF=0.25;AN=12;AO=12;CIGAR=1X;DP=89;DPB=89;DPRA=3.2381;EPP=29.068;EPPR=170.214;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.5325;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.987013;PAO=0;PQA=0;PQR=0;PRO=0;QA=465;QR=3032;RO=77;RPL=0;RPP=29.068;RPPR=170.214;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=77;SRP=170.214;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:13:9,4:9:357:4:146:-9.58235,0,-28.5774 0/1:34:28,6:28:1093:6:239:-11.6493,0,-88.4194 0/1:21:19,2:19:767:2:80:-1.27016,0,-61.7495 0/0:10:10,0:10:400:0:0:0,-3.0103,-36.3595 0/0:3:3,0:3:122:0:0:0,-0.90309,-11.3725 0/0:8:8,0:8:293:0:0:0,-2.40824,-26.7046 dDocent_Contig_11322 16 . A T 570.857 . AB=0.207547;ABP=121.13;AC=5;AF=0.416667;AN=12;AO=33;CIGAR=1X;DP=185;DPB=185;DPRA=1.22308;EPP=74.6689;EPPR=333.074;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1248;QR=6001;RO=152;RPL=0;RPP=74.6689;RPPR=333.074;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=152;SRP=333.074;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:16,3:16:630:3:110:-4.54085,0,-51.314 0/1:43:29,14:29:1147:14:549:-36.8112,0,-90.5671 0/1:49:39,10:39:1569:10:356:-17.6219,0,-126.695 0/1:29:26,3:26:1032:3:116:-2.08712,0,-84.4466 0/0:26:26,0:26:995:0:0:0,-7.82678,-89.8477 0/1:19:16,3:16:628:3:117:-5.19081,0,-51.1305 dDocent_Contig_11323 11 . T A 209.674 . AB=0.136691;ABP=162.371;AC=4;AF=0.333333;AN=12;AO=24;CIGAR=1X;DP=231;DPB=231;DPRA=0;EPP=55.1256;EPPR=452.505;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.791667;PAIREDR=0.903382;PAO=0;PQA=0;PQR=0;PRO=0;QA=963;QR=8296;RO=207;RPL=0;RPP=55.1256;RPPR=452.505;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=207;SRP=452.505;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:29,6:29:1162:6:245:-11.8934,0,-94.3225 0/1:41:35,6:35:1406:6:238:-9.45142,0,-114.45 0/1:46:41,5:41:1631:5:197:-4.25665,0,-133.167 0/1:17:15,2:15:599:2:81:-2.56822,0,-49.1293 0/0:36:35,1:35:1404:1:41:0,-6.74251,-122.517 0/0:56:52,4:52:2094:4:161:0,-1.9822,-173.758 dDocent_Contig_11324 11 . T C 69.7516 . AB=0.146341;ABP=47.552;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=402;DPB=402;DPRA=0.227147;EPP=16.0391;EPPR=862.913;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.333333;PAIREDR=0.825758;PAO=0;PQA=0;PQR=0;PRO=0;QA=244;QR=15775;RO=396;RPL=0;RPP=16.0391;RPPR=862.913;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=396;SRP=862.913;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:52:52,0:52:2091:0:0:0,-15.6536,-188.37 0/0:98:98,0:98:3875:0:0:0,-29.5009,-348.761 0/0:104:104,0:104:4110:0:0:0,-31.3071,-369.881 0/0:107:107,0:107:4292:0:0:0,-32.2102,-386.235 0/1:22:18,4:18:720:4:163:-8.43577,0,-58.502 0/1:19:17,2:17:687:2:81:-1.96616,0,-56.4386 dDocent_Contig_11325 47 . A C 589.511 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=298;DPB=298;DPRA=0.283688;EPP=37.7539;EPPR=615.366;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=646;QR=10725;RO=282;RPL=0;RPP=37.7539;RPPR=615.366;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=282;SRP=615.366;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:48,0:48:1779:0:0:0,-14.4494,-160.348 0/0:53:53,0:53:1988:0:0:0,-15.9546,-179.139 0/0:78:78,0:78:3030:0:0:0,-23.4803,-272.832 0/0:68:68,0:68:2614:0:0:0,-20.47,-235.421 1/1:16:0,16:0:0:16:646:-58.474,-4.81648,0 0/0:35:35,0:35:1314:0:0:0,-10.536,-118.538 dDocent_Contig_11326 14 . G A 156.376 . AB=0.136842;ABP=111.835;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=267;DPB=267;DPRA=1.26271;EPP=37.7539;EPPR=548.05;GTI=0;LEN=1;MEANALT=1;MQM=57.5;MQMR=59.0438;NS=6;NUMALT=1;ODDS=0;PAIRED=0.875;PAIREDR=0.697211;PAO=0;PQA=0;PQR=0;PRO=0;QA=633;QR=10018;RO=251;RPL=0;RPP=37.7539;RPPR=548.05;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=251;SRP=548.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:32,0:32:1276:0:0:0,-9.63296,-114.204 0/0:54:51,3:51:2051:3:114:0,-5.92112,-173.222 0/1:43:38,5:38:1514:5:205:-5.89072,0,-123.548 0/0:46:46,0:46:1849:0:0:0,-13.8474,-166.606 0/0:40:40,0:40:1595:0:0:0,-12.0412,-143.752 0/1:52:44,8:44:1733:8:314:-12.9687,0,-139.594 dDocent_Contig_11328 31 . A G 77.0677 . AB=0.185185;ABP=26.2531;AC=2;AF=0.166667;AN=12;AO=5;CIGAR=1X;DP=117;DPB=117;DPRA=0.6;EPP=13.8677;EPPR=246.215;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.866071;PAO=0;PQA=0;PQR=0;PRO=0;QA=203;QR=4444;RO=112;RPL=0;RPP=13.8677;RPPR=246.215;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=112;SRP=246.215;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:793:0:0:0,-6.0206,-71.6886 0/0:23:23,0:23:927:0:0:0,-6.92369,-83.7344 0/0:24:24,0:24:936:0:0:0,-7.22472,-84.5429 0/0:23:23,0:23:920:0:0:0,-6.92369,-83.106 0/1:6:4,2:4:160:2:80:-5.78539,0,-12.9772 0/1:21:18,3:18:708:3:123:-5.14316,0,-57.725 dDocent_Contig_11329 16 . A G 4891.44 . AB=0.660377;ABP=14.851;AC=3;AF=0.25;AN=12;AO=146;CIGAR=1X;DP=241;DPB=241;DPRA=4.51351;EPP=320.045;EPPR=209.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5750;QR=3743;RO=95;RPL=0;RPP=320.045;RPPR=209.3;RPR=146;RUN=1;SAF=146;SAP=320.045;SAR=0;SRF=95;SRP=209.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:349:0:0:0,-2.70927,-31.7662 0/0:33:33,0:33:1333:0:0:0,-9.93399,-120.228 0/0:11:11,0:11:403:0:0:0,-3.31133,-36.6011 0/0:21:21,0:21:819:0:0:0,-6.32163,-74.0253 1/1:114:3,111:3:122:111:4413:-385.736,-22.9449,0 0/1:53:18,35:18:717:35:1337:-104.63,0,-48.9011 dDocent_Contig_11330 12 . G A 4207.55 . AB=0.291379;ABP=222.269;AC=4;AF=0.333333;AN=12;AO=170;CIGAR=1X;DP=727;DPB=727;DPRA=2.26441;EPP=372.161;EPPR=1212.52;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.978456;PAO=0;PQA=0;PQR=0;PRO=0;QA=6719;QR=22258;RO=557;RPL=0;RPP=372.161;RPPR=1212.52;RPR=170;RUN=1;SAF=170;SAP=372.161;SAR=0;SRF=557;SRP=1212.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:59,0:59:2360:0:0:0,-17.7608,-212.55 0/0:88:87,1:87:3457:1:34:0,-23.0917,-307.779 0/1:45:31,14:31:1255:14:543:-35.6617,0,-99.6684 0/1:38:22,16:22:882:16:638:-46.3149,0,-68.2505 0/1:270:184,86:184:7346:86:3396:-224.425,0,-579.492 0/1:227:174,53:174:6958:53:2108:-121.576,0,-557.555 dDocent_Contig_11332 167 . T A 56.3071 . AB=0.190476;ABP=20.4855;AC=2;AF=0.166667;AN=12;AO=4;CIGAR=1X;DP=58;DPB=58;DPRA=1.13514;EPP=11.6962;EPPR=120.27;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.944444;PAO=0;PQA=0;PQR=0;PRO=0;QA=143;QR=2146;RO=54;RPL=4;RPP=11.6962;RPPR=120.27;RPR=0;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=120.27;SRR=54;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:346:0:0:0,-2.70927,-31.4888 0/1:10:7,3:7:278:3:109:-7.15269,0,-22.3799 0/1:11:10,1:10:405:1:34:-0.0875811,0,-33.4993 0/0:8:8,0:8:309:0:0:0,-2.40824,-28.1682 0/0:7:7,0:7:284:0:0:0,-2.10721,-25.9338 0/0:13:13,0:13:524:0:0:0,-3.91339,-47.507 dDocent_Contig_11335 19 . G A 81.3319 . AB=0.0263158;ABP=299.245;AC=1;AF=0.0833333;AN=12;AO=27;CIGAR=1M1X;DP=751;DPB=751;DPRA=0.946565;EPP=61.6401;EPPR=1527.38;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1074;QR=27770;RO=702;RPL=0;RPP=61.6401;RPPR=1527.38;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=702;SRP=1527.38;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:104:102,0,2,0:102:4063:0,2,0:0,81,0:0,-30.7051,-365.256,-23.6214,-358.577,-357.975,-30.7051,-365.256,-358.577,-365.256 0|0:145:137,0,8,0:137:5451:0,8,0:0,310,0:0,-41.2411,-490.044,-15.3923,-464.582,-462.174,-41.2411,-490.044,-464.582,-490.044 0|0:107:99,0,8,0:99:3900:0,8,0:0,322,0:0,-29.802,-350.6,-2.86186,-324.061,-321.653,-29.802,-350.6,-324.061,-350.6 0|0:131:131,0,0,0:131:5160:0,0,0:0,0,0:0,-39.4349,-464.287,-39.4349,-464.287,-464.287,-39.4349,-464.287,-464.287,-464.287 0|1:152:133,15,4,0:133:5267:15,4,0:603,159,0:-9.65606,0,-428.955,-36.6032,-420.379,-468.865,-49.6931,-433.47,-470.069,-483.16 0|0:112:100,0,5,7:100:3929:0,5,7:0,202,282:0,-30.103,-353.21,-13.4497,-336.556,-335.051,-6.86029,-329.966,-313.312,-327.859 dDocent_Contig_11336 47 . T C 552.421 . AB=0.2;ABP=46.0055;AC=5;AF=0.416667;AN=12;AO=22;CIGAR=1X;DP=98;DPB=98;DPRA=1.03125;EPP=50.7827;EPPR=168.042;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=835;QR=2305;RO=76;RPL=0;RPP=50.7827;RPPR=168.042;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=76;SRP=168.042;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:506:0:0:0,-5.41854,-45.8134 0/1:29:26,3:26:797:3:111:-1.62156,0,-63.2858 0/0:14:14,0:14:452:0:0:0,-4.21442,-40.9915 0/1:21:16,5:16:495:5:199:-11.9671,0,-38.5242 1/1:11:0,11:0:0:11:405:-36.7835,-3.31133,0 0/1:5:2,3:2:55:3:120:-9.68275,0,-3.71931 dDocent_Contig_11337 56 . A C 2471.11 . AB=0.394737;ABP=24.9536;AC=4;AF=0.4;AN=10;AO=90;CIGAR=1X;DP=231;DPB=231;DPRA=19;EPP=198.443;EPPR=309.188;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3576;QR=5543;RO=141;RPL=90;RPP=198.443;RPPR=309.188;RPR=0;RUN=1;SAF=90;SAP=198.443;SAR=0;SRF=141;SRP=309.188;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:14,5:14:553:5:189:-11.6524,0,-44.3928 0/1:74:54,20:54:2119:20:789:-49.0522,0,-168.616 0/1:70:48,22:48:1882:22:895:-59.7834,0,-148.514 0/1:65:22,43:22:869:43:1703:-133.924,0,-58.9544 ./.:.:.:.:.:.:.:. 0/0:3:3,0:3:120:0:0:0,-0.90309,-11.1873 dDocent_Contig_11338 39 . C G 191.09 . AB=0.225;ABP=29.2851;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=264;DPB=264;DPRA=1.16168;EPP=19.0002;EPPR=16.1689;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.818182;PAIREDR=0.701195;PAO=0;PQA=0;PQR=0;PRO=0;QA=432;QR=9019;RO=251;RPL=0;RPP=26.8965;RPPR=548.05;RPR=11;RUN=1;SAF=10;SAP=19.0002;SAR=1;SRF=106;SRP=16.1689;SRR=145;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:67:67,0:67:2406:0:0:0,-20.169,-216.741 0/0:57:53,2:53:1894:2:73:0,-9.99777,-163.758 0/0:9:9,0:9:323:0:0:0,-2.70927,-29.4109 0/1:40:31,9:31:1143:9:359:-20.6319,0,-91.1211 0/0:53:53,0:53:1907:0:0:0,-15.9546,-171.869 0/0:38:38,0:38:1346:0:0:0,-11.4391,-121.411 dDocent_Contig_11339 48 . T C 332.75 . AB=0.461538;ABP=3.34437;AC=2;AF=0.25;AN=8;AO=12;CIGAR=1X;DP=48;DPB=48;DPRA=1.18182;EPP=29.068;EPPR=81.1833;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=486;QR=1454;RO=36;RPL=0;RPP=29.068;RPPR=81.1833;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=36;SRP=81.1833;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:488:0:0:0,-3.61236,-44.2715 0/1:19:9,10:9:367:10:404:-31.0005,0,-27.6757 0/0:10:10,0:10:395:0:0:0,-3.0103,-35.9042 0/1:7:5,2:5:204:2:82:-5.67247,0,-16.6368 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11340 44 . C G 647.578 . AB=0.259259;ABP=43.7857;AC=4;AF=0.333333;AN=12;AO=25;CIGAR=1X;DP=141;DPB=141;DPRA=1.51786;EPP=57.2971;EPPR=250.558;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.815789;PAO=0;PQA=0;PQR=0;PRO=0;QA=1014;QR=4484;RO=114;RPL=0;RPP=57.2971;RPPR=250.558;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=114;SRP=250.558;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:749:0:0:0,-5.71957,-67.7299 0/1:46:30,16:30:1156:16:649:-44.8957,0,-90.4665 0/1:35:30,5:30:1192:5:202:-8.02544,0,-97.0249 1/1:4:0,4:0:0:4:163:-15.0584,-1.20412,0 0/0:25:24,0:24:963:0:0:0,-7.22472,-86.592 0/0:12:11,0:11:424:0:0:0,-3.31133,-38.1054 dDocent_Contig_11341 7 . T G 43062.5 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=1529;CIGAR=1X;DP=1595;DPB=1595;DPRA=0;EPP=3323.19;EPPR=126.784;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=0.704382;PAIREDR=0.719298;PAO=0;PQA=0;PQR=0;PRO=0;QA=48697;QR=839;RO=57;RPL=0;RPP=3323.19;RPPR=126.784;RPR=1529;RUN=1;SAF=1529;SAP=3323.19;SAR=0;SRF=57;SRP=126.784;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:521:16,504:16:236:504:16046:-1422.31,-135.261,0 1/1:476:19,455:19:280:455:14605:-1288.74,-117.455,0 1/1:231:9,219:9:152:219:7160:-630.53,-55.0338,0 1/1:367:13,351:13:171:351:10886:-964.066,-94.1676,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11342 36 . T C 34.5374 . AB=0.222222;ABP=9.04217;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=1X1M1X;DP=66;DPB=66;DPRA=0.789474;EPP=7.35324;EPPR=141.985;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.765625;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=2552;RO=64;RPL=0;RPP=7.35324;RPPR=141.985;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=64;SRP=141.985;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:12:12,0:12:479:0:0:0,-3.61236,-43.4627 0|0:14:14,0:14:561:0:0:0,-4.21442,-50.8335 0|0:8:8,0:8:326:0:0:0,-2.40824,-29.7099 0|0:10:10,0:10:399:0:0:0,-3.0103,-36.2693 0|1:9:7,2:7:276:2:81:-4.97646,0,-22.4981 0|0:13:13,0:13:511:0:0:0,-3.91339,-46.334 dDocent_Contig_11343 111 . C T 41.9864 . AB=0.166667;ABP=31.9633;AC=1;AF=0.1;AN=10;AO=7;CIGAR=1X;DP=181;DPB=181;DPRA=1.16176;EPP=18.2106;EPPR=380.846;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.3046;NS=5;NUMALT=1;ODDS=0;PAIRED=0.142857;PAIREDR=0.683908;PAO=0;PQA=0;PQR=0;PRO=0;QA=229;QR=5918;RO=174;RPL=0;RPP=18.2106;RPPR=380.846;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=380.846;SRR=174;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:25,5:25:846:5:158:-5.49964,0,-64.8889 0/0:49:47,2:47:1606:2:71:0,-8.00841,-135.556 0/0:47:47,0:47:1577:0:0:0,-14.1484,-142.212 0/0:47:47,0:47:1611:0:0:0,-14.1484,-145.28 ./.:.:.:.:.:.:.:. 0/0:8:8,0:8:278:0:0:0,-2.40824,-25.358 dDocent_Contig_11345 20 . G C 10144.6 . AB=0.0532915;ABP=555.919;AC=0;AF=0;AN=12;AO=17;CIGAR=1X3M1X;DP=1002;DPB=1002;DPRA=18.7647;EPP=39.9253;EPPR=1342.81;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=684;QR=23967;RO=617;RPL=0;RPP=39.9253;RPPR=1342.81;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=617;SRP=1342.81;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:19:18,0,1:18:701:0,1:0,41:0,-5.41854,-63.0107,-1.625,-59.6255,-59.3245 0|0:11:10,0,1:10:386:0,1:0,38:-0.485939,-3.49624,-35.1993,0,-32.0833,-31.7823 0|0:9:9,0,0:9:356:0,0:0,0:0,-2.70927,-32.4023,-2.70927,-32.4023,-32.4023 0|0:23:23,0,0:23:875:0,0:0,0:0,-6.92369,-79.0587,-6.92369,-79.0587,-79.0587 0|0:621:342,0,274:342:13300:0,274:0,10897:-794.231,-897.183,-1990.07,0,-1092.95,-1010.47 0|0:319:215,17,87:215:8349:17,87:684,3497:-223.448,-231.797,-912.643,0,-629.586,-659.77 dDocent_Contig_11346 32 . G A 337.991 . AB=0.138462;ABP=224.4;AC=2;AF=0.166667;AN=12;AO=38;CIGAR=1X;DP=1071;DPB=1071;DPRA=1.12273;EPP=85.5263;EPPR=2246.14;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1492;QR=41042;RO=1033;RPL=0;RPP=85.5263;RPPR=2246.14;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=1033;SRP=2246.14;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:149:149,0:149:5941:0:0:0,-44.8535,-534.465 0/1:96:80,16:80:3189:16:633:-28.4061,0,-258.178 0/1:99:88,11:88:3471:11:423:-8.61484,0,-282.636 0/0:122:113,9:113:4498:9:357:0,-4.23354,-372.261 0/0:424:422,2:422:16701:2:79:0,-120.139,-1494.28 0/0:181:181,0:181:7242:0:0:0,-54.4864,-651.421 dDocent_Contig_11347 56 . C G 865.622 . AB=0.199095;ABP=176.817;AC=2;AF=0.166667;AN=12;AO=44;CIGAR=1X;DP=372;DPB=372;DPRA=2.92715;EPP=98.5551;EPPR=713.082;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996942;PAO=0;PQA=0;PQR=0;PRO=0;QA=1730;QR=13102;RO=327;RPL=44;RPP=98.5551;RPPR=713.082;RPR=0;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=327;SRP=713.082;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:59,0:59:2356:0:0:0,-17.7608,-212.196 0/0:45:44,0:44:1770:0:0:0,-13.2453,-159.102 0/0:13:13,0:13:527:0:0:0,-3.91339,-47.7768 0/0:34:34,0:34:1343:0:0:0,-10.235,-121.129 0/1:108:82,26:82:3309:26:1037:-61.1141,0,-265.346 0/1:113:95,18:95:3797:18:693:-28.67,0,-307.712 dDocent_Contig_11348 48 . G A 2799.94 . AB=0.322485;ABP=95.5227;AC=3;AF=0.3;AN=10;AO=111;CIGAR=1X;DP=617;DPB=617;DPRA=0.918561;EPP=244.044;EPPR=1093.11;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4373;QR=19961;RO=506;RPL=0;RPP=244.044;RPPR=1093.11;RPR=111;RUN=1;SAF=111;SAP=244.044;SAR=0;SRF=506;SRP=1101.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:147:145,2:145:5704:2:81:0,-36.5657,-505.485 0/0:132:132,0:132:5179:0:0:0,-39.736,-465.993 0/1:85:59,26:59:2330:26:1022:-66.6887,0,-184.277 0/1:147:107,40:107:4256:40:1578:-98.0087,0,-338.746 ./.:.:.:.:.:.:.:. 0/1:106:63,43:63:2492:43:1692:-120.598,0,-192.508 dDocent_Contig_11352 12 . A C 2354.46 . AB=0.377119;ABP=33.963;AC=6;AF=0.5;AN=12;AO=89;CIGAR=1X;DP=236;DPB=236;DPRA=0;EPP=196.271;EPPR=322.217;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.752809;PAIREDR=0.802721;PAO=0;PQA=0;PQR=0;PRO=0;QA=3507;QR=5741;RO=147;RPL=0;RPP=196.271;RPPR=322.217;RPR=89;RUN=1;SAF=89;SAP=196.271;SAR=0;SRF=147;SRP=322.217;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:46:35,11:35:1361:11:407:-23.1208,0,-108.908 0/1:31:9,22:9:351:22:867:-69.0105,0,-22.6153 0/1:44:22,22:22:856:22:869:-65.2719,0,-64.1011 0/1:33:12,21:12:476:21:842:-66.1582,0,-33.2538 0/1:31:28,3:28:1098:3:122:-2.04056,0,-89.779 0/1:51:41,10:41:1599:10:400:-21.0042,0,-128.802 dDocent_Contig_11353 9 . A G 42.0008 . AB=0.1875;ABP=16.582;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=129;DPB=129;DPRA=0.965517;EPP=11.6962;EPPR=274.444;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=151;QR=4794;RO=125;RPL=0;RPP=11.6962;RPPR=274.444;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=125;SRP=274.444;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:768:0:0:0,-6.0206,-69.4485 0/0:26:26,0:26:996:0:0:0,-7.82678,-89.9508 0/0:27:27,0:27:1032:0:0:0,-8.12781,-93.1886 0/0:26:25,1:25:957:1:38:0,-4.02951,-82.6461 0/0:14:14,0:14:539:0:0:0,-4.21442,-48.8556 0/1:16:13,3:13:502:3:113:-5.72293,0,-40.7122 dDocent_Contig_11354 8 . A C 4461.88 . AB=0.037037;ABP=254.338;AC=0;AF=0;AN=12;AO=11;CIGAR=1M2X12M;DP=740;DPB=737.2;DPRA=0.983936;EPP=26.8965;EPPR=1073.55;GTI=0;LEN=1;MEANALT=4.66667;MQM=60;MQMR=59.9899;NS=6;NUMALT=5;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.997972;PAO=0;PQA=0;PQR=0;PRO=0;QA=416;QR=18834;RO=493;RPL=0;RPP=26.8965;RPPR=1073.55;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=493;SRP=1073.55;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:79:65,7,4,0,0,0:65:2490:7,4,0,0,0:262,154,0,0,0:-1.88542,0,-202.246,-8.80516,-191.708,-211.96,-21.4524,-204.353,-213.164,-225.809,-21.4524,-204.353,-213.164,-225.809,-225.809,-21.4524,-204.353,-213.164,-225.809,-225.809,-225.809 0|0:110:92,0,6,0,1,3:92:3533:0,6,0,1,3:0,223,0,39,122:0,-27.6948,-317.707,-9.45326,-299.459,-297.653,-27.6948,-317.707,-299.459,-317.707,-24.4887,-314.501,-296.253,-314.501,-314.2,-17.6274,-307.644,-289.396,-307.644,-304.438,-306.74 0|0:56:42,0,1,0,9,0:42:1610:0,1,0,9,0:0,39,0,366,0:-17.5981,-30.2414,-162.384,-27.0346,-159.178,-158.877,-30.2414,-162.384,-159.178,-162.384,0,-132.19,-128.984,-132.19,-129.481,-30.2414,-162.384,-159.178,-162.384,-132.19,-162.384 0|0:83:77,0,0,0,1,2:77:2931:0,0,0,1,2:0,0,0,41,82:0,-23.1793,-263.694,-23.1793,-263.694,-263.694,-23.1793,-263.694,-263.694,-263.694,-19.7646,-260.309,-260.309,-260.309,-260.008,-16.3346,-256.925,-256.925,-256.925,-253.54,-256.323 0|0:203:77,0,0,12,0,89:77:2935:0,0,12,0,89:0,0,477,0,3567:-270.714,-293.893,-534.65,-293.893,-534.65,-534.65,-254.623,-495.381,-495.381,-491.768,-293.893,-534.65,-534.65,-495.381,-534.65,0,-240.773,-240.773,-201.502,-240.773,-213.982 0|0:209:140,0,0,0,3,62:140:5335:0,0,0,3,62:0,0,0,118,2490:-163.046,-205.19,-642.791,-205.19,-642.791,-642.791,-205.19,-642.791,-642.791,-642.791,-195.484,-633.084,-633.084,-633.084,-632.181,0,-437.611,-437.611,-437.611,-427.905,-418.947 dDocent_Contig_11355 43 . C A 432.403 . AB=0.352941;ABP=12.5903;AC=3;AF=0.25;AN=12;AO=18;CIGAR=1X;DP=103;DPB=103;DPRA=0.980769;EPP=42.0968;EPPR=187.585;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0555556;PAIREDR=0.823529;PAO=0;PQA=0;PQR=0;PRO=0;QA=682;QR=3413;RO=85;RPL=0;RPP=42.0968;RPPR=187.585;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=85;SRP=187.585;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:10,14:10:406:14:542:-41.895,0,-29.6753 0/0:24:24,0:24:949:0:0:0,-7.22472,-85.7083 0/1:5:4,1:4:164:1:20:-0.494807,0,-13.6447 0/0:12:12,0:12:487:0:0:0,-3.61236,-44.1815 0/0:16:16,0:16:647:0:0:0,-4.81648,-58.5635 0/1:22:19,3:19:760:3:120:-4.56465,0,-62.0907 dDocent_Contig_11356 37 . A T 190.278 . AB=0.109091;ABP=76.0113;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=6M1X4M4D1X;DP=211;DPB=207.25;DPRA=1.43478;EPP=16.0391;EPPR=419.933;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.947917;PAO=0;PQA=0;PQR=0;PRO=0;QA=230;QR=7430;RO=192;RPL=0;RPP=16.0391;RPPR=419.933;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=192;SRP=419.933;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:53:53,0,0,0:53:2061:0,0,0:0,0,0:0,-15.9546,-185.712,-15.9546,-185.712,-185.712,-15.9546,-185.712,-185.712,-185.712 0|1:55:47,6,0,0:47:1808:6,0,0:230,0,0:-4.71544,0,-146.604,-18.8638,-148.41,-167.286,-18.8638,-148.41,-167.286,-167.286 0|0:26:25,0,0,0:25:970:0,0,0:0,0,0:0,-7.52575,-87.201,-7.52575,-87.201,-87.201,-7.52575,-87.201,-87.201,-87.201 0|0:36:35,0,0,0:35:1360:0,0,0:0,0,0:0,-10.536,-122.278,-10.536,-122.278,-122.278,-10.536,-122.278,-122.278,-122.278 0|0:23:18,0,0,5:18:689:0,0,5:0,0,199:-11.365,-16.7836,-73.3109,-16.7836,-73.3109,-73.3109,0,-56.9216,-56.9216,-55.4165 0|0:18:14,0,4,0:14:542:0,4,0:0,147,0:-8.16903,-12.3834,-56.9206,0,-44.9087,-43.7046,-12.3834,-56.9206,-44.9087,-56.9206 dDocent_Contig_11357 109 . C T 16903.1 . AB=0.556034;ABP=9.33752;AC=8;AF=0.666667;AN=12;AO=584;CIGAR=1X;DP=687;DPB=687;DPRA=0;EPP=1271.15;EPPR=226.672;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=19622;QR=3434;RO=103;RPL=0;RPP=1271.15;RPPR=226.672;RPR=584;RUN=1;SAF=0;SAP=1271.15;SAR=584;SRF=0;SRP=226.672;SRR=103;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:66:23,43:23:751:43:1431:-109.211,0,-48.0259 0/1:69:21,48:21:725:48:1600:-123.515,0,-44.8005 0/1:65:46,19:46:1539:19:644:-38.7127,0,-119.231 0/1:32:13,19:13:419:19:605:-45.1177,0,-28.3859 1/1:276:0,276:0:0:276:9315:-838.398,-83.0843,0 1/1:179:0,179:0:0:179:6027:-542.581,-53.8844,0 dDocent_Contig_11359 22 . C A 101.882 . AB=0.138462;ABP=76.807;AC=3;AF=0.25;AN=12;AO=9;CIGAR=1X;DP=97;DPB=97;DPRA=2.03125;EPP=22.5536;EPPR=194.1;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.943182;PAO=0;PQA=0;PQR=0;PRO=0;QA=362;QR=3518;RO=88;RPL=0;RPP=22.5536;RPPR=194.1;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=88;SRP=194.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:11:11,0:11:434:0:0:0,-3.31133,-39.4097 0/1:33:28,5:28:1116:5:199:-8.35457,0,-90.7906 0/0:19:19,0:19:752:0:0:0,-5.71957,-68.0028 0/1:21:18,3:18:728:3:122:-5.05086,0,-59.5225 0/0:2:2,0:2:82:0:0:0,-0.60206,-7.77968 0/1:11:10,1:10:406:1:41:-0.783237,0,-33.5891 dDocent_Contig_11360 16 . C A 116.944 . AB=0.2;ABP=26.4622;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=270;DPB=270;DPRA=0.836735;EPP=24.725;EPPR=565.422;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.3;PAIREDR=0.683398;PAO=0;PQA=0;PQR=0;PRO=0;QA=382;QR=10355;RO=259;RPL=0;RPP=24.725;RPPR=565.422;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=259;SRP=565.422;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:32,3:32:1267:3:98:0,-1.39769,-105.162 0/0:46:46,0:46:1845:0:0:0,-13.8474,-166.256 0/1:30:24,6:24:964:6:243:-13.2173,0,-78.0292 0/0:58:57,1:57:2299:1:41:0,-13.3652,-202.967 0/0:51:50,0:50:1965:0:0:0,-15.0515,-176.653 0/0:50:50,0:50:2015:0:0:0,-15.0515,-181.529 dDocent_Contig_11361 50 . T A 1869.07 . AB=0.511278;ABP=3.15724;AC=2;AF=0.166667;AN=12;AO=70;CIGAR=1X;DP=291;DPB=291;DPRA=4.51724;EPP=155.013;EPPR=482.906;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.771429;PAIREDR=0.696833;PAO=0;PQA=0;PQR=0;PRO=0;QA=2623;QR=8138;RO=221;RPL=32;RPP=4.12706;RPPR=3.25594;RPR=38;RUN=1;SAF=32;SAP=4.12706;SAR=38;SRF=113;SRP=3.25594;SRR=108;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:774:0:0:0,-6.32163,-69.9835 0/0:86:85,1:85:3138:1:36:0,-22.2903,-278.999 0/0:8:8,0:8:278:0:0:0,-2.40824,-25.3545 0/0:43:42,1:42:1573:1:36:0,-9.34601,-138.237 0/1:70:45,25:45:1647:25:942:-64.017,0,-127.427 0/1:63:20,43:20:728:43:1609:-126.111,0,-46.8799 dDocent_Contig_11362 49 . T C 238.668 . AB=0.168539;ABP=87.9417;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=222;DPB=222;DPRA=1.96667;EPP=46.4397;EPPR=285.13;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99505;PAO=0;PQA=0;PQR=0;PRO=0;QA=775;QR=8069;RO=202;RPL=0;RPP=46.4397;RPPR=285.13;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=202;SRP=441.648;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:683:0:0:0,-5.11751,-61.8009 0/1:38:35,3:35:1398:3:123:-0.0256485,0,-114.637 0/0:28:28,0:28:1126:0:0:0,-8.42884,-101.623 0/1:51:39,12:39:1550:12:449:-25.3889,0,-124.388 0/0:42:40,2:40:1614:2:80:0,-5.05147,-137.895 0/0:46:43,3:43:1698:3:123:0,-2.38259,-141.574 dDocent_Contig_11363 32 . G T 1238.93 . AB=0.151515;ABP=594.769;AC=5;AF=0.416667;AN=12;AO=101;CIGAR=1X;DP=758;DPB=758;DPRA=0;EPP=222.329;EPPR=1429.67;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9696;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.984779;PAO=0;PQA=0;PQR=0;PRO=0;QA=3978;QR=25811;RO=657;RPL=0;RPP=222.329;RPPR=1429.67;RPR=101;RUN=1;SAF=101;SAP=222.329;SAR=0;SRF=657;SRP=1429.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:74:67,7:67:2637:7:282:-3.47637,0,-215.19 0/1:77:52,25:52:2046:25:959:-63.4318,0,-160.976 0/1:103:87,16:87:3439:16:630:-26.0278,0,-278.565 0/1:99:82,17:82:3141:17:676:-31.3705,0,-252.992 0/0:197:181,16:181:7139:16:641:0,-1.27867,-584.195 0/1:208:188,20:188:7409:20:790:-8.80628,0,-603.872 dDocent_Contig_11364 64 . C T 71.5881 . AB=0.235294;ABP=13.3567;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=143;DPB=143;DPRA=1.91781;EPP=13.8677;EPPR=302.673;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=177;QR=5320;RO=138;RPL=5;RPP=13.8677;RPPR=302.673;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=138;SRP=302.673;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:17:13,4:13:503:4:146:-8.38028,0,-40.4984 0/0:11:11,0:11:417:0:0:0,-3.31133,-37.8812 0/0:43:43,0:43:1652:0:0:0,-12.9443,-148.916 0/0:18:18,0:18:713:0:0:0,-5.41854,-64.4988 0/0:53:52,1:52:1996:1:31:0,-12.8551,-176.752 0/0:1:1,0:1:39:0:0:0,-0.30103,-3.89656 dDocent_Contig_11365 19 . C T 5163.08 . AB=0.734513;ABP=110.969;AC=5;AF=0.416667;AN=12;AO=167;CIGAR=1X;DP=260;DPB=260;DPRA=3.43939;EPP=365.646;EPPR=204.957;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6540;QR=3680;RO=93;RPL=0;RPP=365.646;RPPR=204.957;RPR=167;RUN=1;SAF=167;SAP=365.646;SAR=0;SRF=93;SRP=204.957;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:603:0:0:0,-4.51545,-54.6085 0/1:23:14,9:14:524:9:346:-24.5716,0,-40.5664 1/1:1:0,1:0:0:1:39:-3.89656,-0.30103,0 0/0:18:18,0:18:716:0:0:0,-5.41854,-64.7614 0/1:134:25,109:25:1002:109:4264:-343.425,0,-50.1369 0/1:69:21,48:21:835:48:1891:-149.636,0,-54.6932 dDocent_Contig_11366 7 . G T 8622.29 . AB=0.0362812;ABP=826.698;AC=0;AF=0;AN=12;AO=16;CIGAR=1X1M1X1M;DP=531;DPB=531;DPRA=0;EPP=37.7539;EPPR=380.846;GTI=0;LEN=1;MEANALT=4.33333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=422;QR=5870;RO=174;RPL=0;RPP=37.7539;RPPR=380.846;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=174;SRP=380.846;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:83:9,6,2,65:9:301:6,2,65:163,79,2272:-182.11,-171.964,-194.523,-178.318,-189.827,-202.082,0,-11.5425,-17.8705,-4.81331 0|0:141:88,3,1,45:88:2982:3,1,45:71,38,1533:-97.9389,-118.948,-359.801,-121.312,-357.587,-362.77,0,-236.369,-238.735,-228.306 0|0:59:30,0,0,28:30:1017:0,0,28:0,0,1034:-75.785,-84.8159,-167.253,-84.8159,-167.253,-167.253,0,-82.6695,-82.6695,-74.2407 0|0:217:45,7,2,161:45:1502:7,2,161:188,78,5569:-438.974,-437.712,-557.165,-446.108,-552.86,-567.067,0,-106.815,-115.205,-73.1534 0|0:6:0,0,5,1:0:0:0,5,1:0,147,37:-15.0515,-15.0515,-15.0515,-3.3968,-3.3968,-1.89165,-12.0118,-12.0118,0,-11.7108 0|0:25:2,0,16,7:2:68:0,16,7:0,590,260:-63.4295,-64.0316,-69.545,-15.7924,-21.3012,-16.4847,-42.7539,-48.2665,0,-46.1593 dDocent_Contig_11367 13 . T C 339.417 . AB=0.175439;ABP=107.317;AC=3;AF=0.25;AN=12;AO=23;CIGAR=1X;DP=211;DPB=211;DPRA=1.84444;EPP=52.9542;EPPR=411.247;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.956522;PAIREDR=0.946809;PAO=0;PQA=0;PQR=0;PRO=0;QA=927;QR=7437;RO=188;RPL=0;RPP=52.9542;RPPR=411.247;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=188;SRP=411.247;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:21,9:21:839:9:365:-24.1842,0,-66.794 0/1:56:49,7:49:1939:7:277:-8.44126,0,-157.857 0/0:38:38,0:38:1499:0:0:0,-11.4391,-135.166 0/0:52:49,3:49:1937:3:123:0,-4.18877,-163.07 0/0:7:7,0:7:281:0:0:0,-2.10721,-25.662 0/1:28:24,4:24:942:4:162:-6.53812,0,-76.6538 dDocent_Contig_11368 77 . C T 1575.97 . AB=0.261538;ABP=163.532;AC=6;AF=0.5;AN=12;AO=85;CIGAR=1X1M1X;DP=325;DPB=324.333;DPRA=0;EPP=64.348;EPPR=163.331;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.247059;PAIREDR=0.254237;PAO=0;PQA=0;PQR=0;PRO=0;QA=2935;QR=8262;RO=236;RPL=85;RPP=187.585;RPPR=515.478;RPR=0;RUN=1;SAF=67;SAP=64.348;SAR=18;SRF=184;SRP=163.331;SRR=52;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:47:40,5:40:1416:5:181:-2.81203,0,-113.924 0|1:75:55,18:55:1921:18:626:-34.316,0,-150.822 0|1:37:28,9:28:981:9:287:-15.0005,0,-77.4551 0|1:64:54,10:54:1891:10:352:-12.7499,0,-151.191 0|1:48:17,31:17:585:31:1089:-83.8628,0,-38.5214 0|1:54:42,12:42:1468:12:400:-20.0666,0,-116.145 dDocent_Contig_11369 25 . A G 36.749 . AB=0.111111;ABP=62.1226;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=158;DPB=158;DPRA=1.99115;EPP=13.8677;EPPR=335.246;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.810458;PAO=0;PQA=0;PQR=0;PRO=0;QA=204;QR=6122;RO=153;RPL=0;RPP=13.8677;RPPR=335.246;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=153;SRP=335.246;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:950:0:0:0,-7.22472,-85.7996 0/1:45:40,5:40:1614:5:204:-5.19768,0,-131.941 0/0:28:28,0:28:1107:0:0:0,-8.42884,-99.9077 0/0:28:28,0:28:1134:0:0:0,-8.42884,-102.341 0/0:19:19,0:19:757:0:0:0,-5.71957,-68.4505 0/0:14:14,0:14:560:0:0:0,-4.21442,-50.7412 dDocent_Contig_11370 87 . T A 64.4568 . AB=0.266667;ABP=10.1038;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=151;DPB=151;DPRA=0.935897;EPP=20.3821;EPPR=313.531;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.909091;PAO=0;PQA=0;PQR=0;PRO=0;QA=275;QR=4905;RO=143;RPL=8;RPP=20.3821;RPPR=313.531;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=143;SRP=313.531;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:310:0:0:0,-2.70927,-28.2342 0/0:12:11,1:11:366:1:35:0,-0.113731,-29.7625 0/1:15:11,4:11:377:4:135:-7.968,0,-29.745 0/0:46:43,3:43:1479:3:105:0,-4.05122,-123.61 0/0:20:20,0:20:698:0:0:0,-6.0206,-63.1447 0/0:49:49,0:49:1675:0:0:0,-14.7505,-151.037 dDocent_Contig_11371 13 . G A 272.969 . AB=0.190476;ABP=72.911;AC=4;AF=0.333333;AN=12;AO=16;CIGAR=1X;DP=148;DPB=148;DPRA=0.65625;EPP=37.7539;EPPR=289.645;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8125;PAIREDR=0.590909;PAO=0;PQA=0;PQR=0;PRO=0;QA=634;QR=5145;RO=132;RPL=0;RPP=37.7539;RPPR=289.645;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=132;SRP=289.645;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:17,4:17:656:4:159:-8.37032,0,-53.0443 0/0:41:41,0:41:1591:0:0:0,-12.3422,-143.424 0/0:23:23,0:23:910:0:0:0,-6.92369,-82.2078 0/1:33:27,6:27:1058:6:236:-11.6774,0,-85.5763 0/1:8:4,4:4:155:4:161:-12.4667,0,-11.9165 0/1:22:20,2:20:775:2:78:-0.780641,0,-63.4473 dDocent_Contig_11372 15 . G A 7650.08 . AB=0.685246;ABP=93.9202;AC=7;AF=0.583333;AN=12;AO=245;CIGAR=1M1X1M;DP=343;DPB=344;DPRA=0;EPP=535.021;EPPR=207.129;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9681;QR=3648;RO=94;RPL=0;RPP=535.021;RPPR=207.129;RPR=245;RUN=1;SAF=245;SAP=535.021;SAR=0;SRF=94;SRP=207.129;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:43:20,0,23:20:784:0,23:0,914:-69.6239,-75.6445,-140.113,0,-64.8628,-57.9391 0|1:61:19,0,42:19:730:0,42:0,1666:-131.806,-137.526,-197.443,0,-60.3047,-47.6615 0|1:88:13,0,75:13:498:0,75:0,2965:-240.458,-244.371,-285.231,0,-41.2439,-18.6666 0|1:54:7,3,43:7:277:3,43:116,1691:-137.003,-129.583,-151.477,0,-13.2868,-9.87051 1|1:38:2,0,36:2:79:0,36:0,1414:-120.014,-120.616,-127.117,-3.9419,-10.8371,0 0|1:59:33,0,26:33:1280:0,26:0,1031:-75.3244,-85.2584,-190.408,0,-105.542,-97.7151 dDocent_Contig_11373 10 . A G 74.9852 . AB=0.148148;ABP=61.0771;AC=3;AF=0.25;AN=12;AO=10;CIGAR=2X;DP=159;DPB=159;DPRA=0.782258;EPP=24.725;EPPR=326.56;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=387;QR=5484;RO=149;RPL=0;RPP=24.725;RPPR=326.56;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=149;SRP=326.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:14:12,2:12:430:2:82:-3.56526,0,-34.8136 0|0:43:41,2:41:1522:2:78:0,-5.54099,-129.836 0|1:16:14,2:14:492:2:78:-2.5863,0,-39.7771 0|1:24:20,4:20:730:4:149:-6.54856,0,-58.7806 0|0:20:20,0:20:774:0:0:0,-6.0206,-69.9774 0|0:42:42,0:42:1536:0:0:0,-12.6433,-138.488 dDocent_Contig_11376 9 . G A 86.0843 . AB=0.135593;ABP=139.114;AC=1;AF=0.0833333;AN=12;AO=33;CIGAR=1X;DP=769;DPB=769;DPRA=1.34348;EPP=74.6689;EPPR=1601.21;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.941576;PAO=0;PQA=0;PQR=0;PRO=0;QA=1081;QR=24780;RO=736;RPL=0;RPP=74.6689;RPPR=1601.21;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=736;SRP=1601.21;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:113:113,0:113:3825:0:0:0,-34.0164,-344.412 0/0:117:117,0:117:3987:0:0:0,-35.2205,-358.994 0/0:100:100,0:100:3393:0:0:0,-30.103,-305.561 0/0:130:130,0:130:4414:0:0:0,-39.1339,-397.405 0/1:118:102,16:102:3464:16:504:-10.1313,0,-276.418 0/0:191:174,17:174:5697:17:577:0,-5.25507,-460.565 dDocent_Contig_11378 98 . T A 1461.59 . AB=0.467742;ABP=4.13106;AC=6;AF=0.5;AN=12;AO=58;CIGAR=1X;DP=124;DPB=124;DPRA=0;EPP=128.956;EPPR=146.327;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.844828;PAIREDR=0.833333;PAO=0;PQA=0;PQR=0;PRO=0;QA=2140;QR=2410;RO=66;RPL=0;RPP=128.956;RPPR=146.327;RPR=58;RUN=1;SAF=0;SAP=128.956;SAR=58;SRF=0;SRP=146.327;SRR=66;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:3:1,2:1:37:2:74:-6.12279,0,-2.79474 0/1:20:8,12:8:296:12:443:-34.1953,0,-20.9736 0/1:13:8,5:8:294:5:185:-13.0966,0,-22.899 0/1:50:22,28:22:801:28:1035:-78.4132,0,-57.3633 0/1:22:15,7:15:540:7:258:-16.9524,0,-42.3117 0/1:16:12,4:12:442:4:145:-8.58899,0,-35.3089 dDocent_Contig_11380 68 . A G 126.038 . AB=0.126437;ABP=108.464;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1X;DP=351;DPB=351;DPRA=1.4375;EPP=44.2683;EPPR=723.939;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.98494;PAO=0;PQA=0;PQR=0;PRO=0;QA=768;QR=12954;RO=332;RPL=19;RPP=44.2683;RPPR=723.939;RPR=0;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=332;SRP=723.939;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:68:68,0:68:2710:0:0:0,-20.47,-244.026 0/0:77:71,6:71:2755:6:245:0,-0.749837,-225.652 0/0:37:37,0:37:1459:0:0:0,-11.1381,-131.569 0/1:87:76,11:76:2905:11:444:-14.1266,0,-235.38 0/0:39:39,0:39:1552:0:0:0,-11.7402,-139.922 0/0:43:41,2:41:1573:2:79:0,-5.44705,-134.309 dDocent_Contig_11381 55 . T G 31.6395 . AB=0.104478;ABP=94.0501;AC=1;AF=0.1;AN=10;AO=8;CIGAR=1X;DP=170;DPB=170;DPRA=1.6875;EPP=20.3821;EPPR=354.789;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0.875;PAIREDR=0.987654;PAO=0;PQA=0;PQR=0;PRO=0;QA=313;QR=6441;RO=162;RPL=8;RPP=20.3821;RPPR=354.789;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=162;SRP=354.789;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 0/0:40:40,0:40:1592:0:0:0,-12.0412,-143.517 0/0:27:27,0:27:1082:0:0:0,-8.12781,-97.6692 0/1:67:60,7:60:2375:7:273:-4.76571,0,-193.748 0/0:23:22,1:22:869:1:40:0,-2.92801,-74.5272 0/0:13:13,0:13:523:0:0:0,-3.91339,-47.4157 dDocent_Contig_11383 17 . G A 1037.92 . AB=0.342105;ABP=27.6965;AC=3;AF=0.25;AN=12;AO=49;CIGAR=1X;DP=383;DPB=383;DPRA=0;EPP=109.412;EPPR=728.282;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0;PAIREDR=0.931138;PAO=0;PQA=0;PQR=0;PRO=0;QA=1970;QR=13340;RO=334;RPL=0;RPP=109.412;RPPR=728.282;RPR=49;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=334;SRP=728.282;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:105:101,4:101:4033:4:156:0,-17.1917,-348.533 0/0:142:137,5:137:5452:5:195:0,-24.8259,-472.612 0/0:22:21,1:21:845:1:38:0,-2.82539,-72.5666 0/1:75:57,18:57:2293:18:728:-43.2675,0,-183.949 0/1:27:15,12:15:594:12:486:-35.9638,0,-45.6655 0/1:12:3,9:3:123:9:367:-29.7829,0,-7.85243 dDocent_Contig_11384 7 . G A 365.354 . AB=0.326087;ABP=15.095;AC=1;AF=0.1;AN=10;AO=15;CIGAR=1X;DP=119;DPB=119;DPRA=2.52055;EPP=35.5824;EPPR=224.5;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=570;QR=3153;RO=102;RPL=0;RPP=35.5824;RPPR=224.5;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=102;SRP=224.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:46:30,15:30:972:15:570:-37.8362,0,-73.9604 0/0:16:16,0:16:444:0:0:0,-4.81648,-40.2259 0/0:2:2,0:2:77:0:0:0,-0.60206,-7.30914 0/0:35:35,0:35:1066:0:0:0,-10.536,-96.208 ./.:.:.:.:.:.:.:. 0/0:20:19,0:19:594:0:0:0,-5.71957,-53.6203 dDocent_Contig_11385 47 . A G 1509.14 . AB=0.397163;ABP=15.9621;AC=6;AF=0.5;AN=12;AO=56;CIGAR=1X;DP=141;DPB=141;DPRA=0;EPP=124.613;EPPR=187.585;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.892857;PAIREDR=0.929412;PAO=0;PQA=0;PQR=0;PRO=0;QA=2249;QR=3381;RO=85;RPL=0;RPP=124.613;RPPR=187.585;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=85;SRP=187.585;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:5,7:5:196:7:284:-22.3216,0,-14.4007 0/1:20:8,12:8:321:12:488:-38.2509,0,-23.2369 0/1:13:7,6:7:276:6:244:-18.4252,0,-21.2954 0/1:16:9,7:9:362:7:277:-20.4836,0,-28.1271 0/1:16:11,5:11:415:5:198:-13.3793,0,-32.8714 0/1:64:45,19:45:1811:19:758:-49.2752,0,-143.932 dDocent_Contig_11386 137 . A G 174.079 . AB=0.166667;ABP=78.288;AC=3;AF=0.25;AN=12;AO=13;CIGAR=1X;DP=139;DPB=139;DPRA=1.27869;EPP=31.2394;EPPR=276.616;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=493;QR=4848;RO=126;RPL=0;RPP=31.2394;RPPR=276.616;RPR=13;RUN=1;SAF=0;SAP=31.2394;SAR=13;SRF=0;SRP=276.616;SRR=126;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:15:12,3:12:465:3:112:-5.93045,0,-37.6816 0/1:43:35,8:35:1354:8:303:-14.6821,0,-109.197 0/0:15:15,0:15:579:0:0:0,-4.51545,-52.4526 0/0:40:40,0:40:1519:0:0:0,-12.0412,-136.98 0/0:6:6,0:6:233:0:0:0,-1.80618,-21.339 0/1:20:18,2:18:698:2:78:-1.38287,0,-57.132 dDocent_Contig_11390 8 . T C 41.6948 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=4;CIGAR=2X2M1X;DP=132;DPB=132;DPRA=3.96296;EPP=11.6962;EPPR=259.244;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=149;QR=4061;RO=118;RPL=0;RPP=11.6962;RPPR=259.244;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=118;SRP=259.244;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:7:5,0,0,2:5:187:0,0,2:0,0,79:-5.39003,-6.89518,-22.1923,-6.89518,-22.1923,-22.1923,0,-15.6857,-15.6857,-15.0836 0|0:60:56,1,3,0:56:1920:1,3,0:39,33,0:0,-13.5819,-169.354,-15.0005,-167.6,-169.904,-16.8577,-169.655,-170.807,-172.862 0|0:28:22,2,4,0:22:735:2,4,0:71,44,0:0,-0.756041,-59.8395,-4.03002,-57.7202,-62.3028,-6.62266,-60.4416,-63.5069,-66.2305 0|0:1:1,0,0,0:1:37:0,0,0:0,0,0:0,-0.30103,-3.69783,-0.30103,-3.69783,-3.69783,-0.30103,-3.69783,-3.69783,-3.69783 0|0:17:17,0,0,0:17:601:0,0,0:0,0,0:0,-5.11751,-54.4111,-5.11751,-54.4111,-54.4111,-5.11751,-54.4111,-54.4111,-54.4111 0|0:19:17,1,1,0:17:581:1,1,0:39,11,0:0,-1.7718,-48.8372,-4.56837,-48.4621,-51.3696,-5.11751,-49.1382,-51.6707,-52.3473 dDocent_Contig_11391 28 . A G 82.2252 . AB=0.108527;ABP=174.725;AC=3;AF=0.25;AN=12;AO=15;CIGAR=1X;DP=206;DPB=206;DPRA=2.075;EPP=35.5824;EPPR=417.762;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.466667;PAIREDR=0.801047;PAO=0;PQA=0;PQR=0;PRO=0;QA=588;QR=7535;RO=191;RPL=0;RPP=35.5824;RPPR=417.762;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=191;SRP=417.762;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:19,3:19:765:3:123:-4.84213,0,-62.5483 0/1:47:43,4:43:1670:4:154:-0.0825616,0,-136.377 0/0:37:36,1:36:1423:1:41:0,-7.04354,-124.223 0/1:60:53,7:53:2096:7:270:-6.60126,0,-170.77 0/0:21:21,0:21:820:0:0:0,-6.32163,-74.1137 0/0:19:19,0:19:761:0:0:0,-5.71957,-68.8109 dDocent_Contig_11392 8 . T G 157.009 . AB=0.285714;ABP=14.1779;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=132;DPB=132;DPRA=1.34615;EPP=20.3821;EPPR=272.273;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=278;QR=3863;RO=124;RPL=0;RPP=20.3821;RPPR=272.273;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=124;SRP=272.273;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:20,8:20:638:8:278:-16.9228,0,-49.2852 0/0:36:36,0:36:1077:0:0:0,-10.8371,-97.1894 0/0:30:30,0:30:961:0:0:0,-9.0309,-86.7694 0/0:21:21,0:21:695:0:0:0,-6.32163,-62.8545 0/0:5:5,0:5:143:0:0:0,-1.50515,-13.1533 0/0:12:12,0:12:349:0:0:0,-3.61236,-31.6881 dDocent_Contig_11394 34 . G T 73.0507 . AB=0.263158;ABP=12.2676;AC=2;AF=0.166667;AN=12;AO=5;CIGAR=1X;DP=43;DPB=43;DPRA=1.58333;EPP=13.8677;EPPR=85.5263;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=173;QR=1519;RO=38;RPL=0;RPP=13.8677;RPPR=85.5263;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=38;SRP=85.5263;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:4:4,0:4:163:0:0:0,-1.20412,-15.0584 0/0:8:8,0:8:322:0:0:0,-2.40824,-29.3483 0/0:6:6,0:6:243:0:0:0,-1.80618,-22.2482 0/1:4:2,2:2:73:2:64:-4.87443,0,-5.72718 0/0:6:6,0:6:245:0:0:0,-1.80618,-22.4295 0/1:15:12,3:12:473:3:109:-5.65229,0,-38.4028 dDocent_Contig_11395 11 . T A 6321.59 . AB=0.358659;ABP=158.311;AC=6;AF=0.5;AN=12;AO=321;CIGAR=1X2M2X3M;DP=895;DPB=895;DPRA=0;EPP=700.053;EPPR=1164.75;GTI=0;LEN=1;MEANALT=3.16667;MQM=43.2897;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.442368;PAIREDR=0.940187;PAO=0;PQA=0;PQR=0;PRO=0;QA=10462;QR=20807;RO=535;RPL=0;RPP=700.053;RPPR=1164.75;RPR=321;RUN=1;SAF=321;SAP=700.053;SAR=0;SRF=535;SRP=1164.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:146:61,0,74,8:61:2345:0,74,8:0,2273,289:-151.409,-169.771,-362.307,0,-192.525,-170.248,-148.021,-340.56,-170.783,-338.152 0|1:98:38,0,58,2:38:1476:0,58,2:0,1714,72:-115.358,-126.798,-248.12,0,-121.335,-103.875,-121.46,-242.784,-116.002,-242.182 0|1:127:91,15,20,0:91:3567:15,20,0:580,728,0:-30.8943,-10.6519,-299.495,0,-245.722,-287.32,-58.2881,-304.011,-293.341,-351.63 0|1:166:94,0,69,2:94:3666:0,69,2:0,2000,72:-119.46,-147.757,-449.156,0,-301.461,-280.69,-142.419,-443.82,-296.126,-443.218 0|1:196:140,0,50,4:140:5449:0,50,4:0,1946,144:-115.833,-157.977,-605.79,0,-447.905,-432.853,-147.308,-595.119,-437.234,-593.914 0|1:162:111,0,50,1:111:4304:0,50,1:0,1801,36:-110.428,-143.842,-497.448,0,-353.639,-338.587,-141.174,-494.78,-350.971,-494.479 dDocent_Contig_11396 19 . T A 70.635 . AB=0.109244;ABP=160.834;AC=3;AF=0.25;AN=12;AO=14;CIGAR=1X1M1X2M1X;DP=200;DPB=200;DPRA=1.72222;EPP=33.4109;EPPR=400.39;GTI=0;LEN=1;MEANALT=1.5;MQM=49.9286;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.743169;PAO=0;PQA=0;PQR=0;PRO=0;QA=554;QR=7107;RO=183;RPL=0;RPP=33.4109;RPPR=400.39;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=183;SRP=400.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:29:29,0,0:29:1109:0,0:0,0:0,-8.72987,-100.104,-8.72987,-100.104,-100.104 0|0:36:33,2,1:33:1286:2,1:72,38:0,-4.07559,-109.177,-6.83301,-106.684,-112.251 0|0:16:16,0,0:16:619:0,0:0,0:0,-4.81648,-56.0482,-4.81648,-56.0482,-56.0482 0|1:38:33,0,5:33:1299:0,5:0,199:-6.71027,-16.6443,-123.5,0,-107.25,-105.744 0|1:33:30,0,3:30:1177:0,3:0,118:-0.84508,-9.87598,-106.675,0,-97.1845,-96.2814 0|1:48:42,0,5:42:1617:0,5:0,199:-3.56811,-16.2114,-148.954,0,-132.729,-131.224 dDocent_Contig_11397 15 . C A 720.482 . AB=0.278261;ABP=52.1233;AC=5;AF=0.416667;AN=12;AO=32;CIGAR=1X;DP=138;DPB=138;DPRA=1;EPP=72.4974;EPPR=233.186;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.78125;PAIREDR=0.613208;PAO=0;PQA=0;PQR=0;PRO=0;QA=1267;QR=4149;RO=106;RPL=0;RPP=72.4974;RPPR=233.186;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=106;SRP=233.186;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:24,10:24:933:10:390:-25.2179,0,-74.0446 0/0:23:23,0:23:896:0:0:0,-6.92369,-80.9513 0/1:7:2,5:2:79:5:194:-15.7225,0,-5.39003 0/1:17:14,3:14:541:3:122:-6.25498,0,-43.9142 0/1:22:18,4:18:713:4:160:-8.16114,0,-57.8747 0/1:35:25,10:25:987:10:401:-25.9135,0,-78.5983 dDocent_Contig_11399 7 . G A 4652.15 . AB=0.380631;ABP=57.9622;AC=6;AF=0.5;AN=12;AO=169;CIGAR=1X1M1X;DP=444;DPB=444;DPRA=0;EPP=369.989;EPPR=415.59;GTI=0;LEN=1;MEANALT=2.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=5.55112e-17;PAIRED=0.87574;PAIREDR=0.947368;PAO=0;PQA=0;PQR=0;PRO=0;QA=6426;QR=6429;RO=190;RPL=0;RPP=369.989;RPPR=415.59;RPR=169;RUN=1;SAF=169;SAP=369.989;SAR=0;SRF=190;SRP=415.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:67:29,26,12:29:942:26,12:986,428:-72.1325,0,-68.157,-45.987,-41.092,-118.352 0|1:132:50,53,26:50:1722:53,26:2019,899:-150.599,0,-123.892,-92.6359,-66.821,-224.635 0|1:86:35,31,20:35:1191:31,20:1184,759:-86.6098,0,-87.2366,-34.9092,-34.3168,-125.46 0|1:94:55,30,3:55:1862:30,3:1130,108:-76.1382,0,-141.984,-83.8826,-142.202,-233.914 1|0:33:10,12,11:10:317:12,11:455,391:-40.701,-6.39075,-28.2653,-11.865,0,-34.0307 0|1:32:11,17,4:11:395:17,4:652,128:-50.2563,0,-27.1289,-43.2698,-21.947,-74.2739 dDocent_Contig_11400 11 . C T 400.268 . AB=0.150171;ABP=314.465;AC=4;AF=0.333333;AN=12;AO=46;CIGAR=1X;DP=412;DPB=412;DPRA=1.10794;EPP=102.898;EPPR=797.769;GTI=0;LEN=1;MEANALT=1;MQM=47.6739;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.60929;PAO=0;PQA=0;PQR=0;PRO=0;QA=1721;QR=14067;RO=366;RPL=0;RPP=102.898;RPPR=797.769;RPR=46;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=366;SRP=797.769;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:96:86,10:86:3219:10:336:-0.870214,0,-260.9 0/0:56:54,2:54:2110:2:80:0,-9.2661,-182.497 0/0:63:63,0:63:2403:0:0:0,-18.9649,-216.435 0/1:89:77,12:77:2960:12:481:-16.8501,0,-239.731 0/1:36:30,6:30:1196:6:239:-6.36849,0,-97.0825 0/1:72:56,16:56:2179:16:585:-22.0247,0,-174.62 dDocent_Contig_11401 11 . T C 3674.23 . AB=0.414414;ABP=24.1968;AC=6;AF=0.5;AN=12;AO=138;CIGAR=1M1X7M;DP=333;DPB=332.556;DPRA=0;EPP=302.673;EPPR=404.733;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.985507;PAIREDR=0.924324;PAO=0;PQA=0;PQR=0;PRO=0;QA=5281;QR=7148;RO=185;RPL=0;RPP=302.673;RPPR=404.733;RPR=138;RUN=1;SAF=138;SAP=302.673;SAR=0;SRF=185;SRP=404.733;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:27:13,0,14:13:512:0,14:0,549:-41.6236,-45.537,-87.6597,0,-42.5154,-38.3009 0|1:75:56,0,18:56:2158:0,18:0,709:-41.4543,-58.312,-235.498,0,-177.169,-171.751 0|1:47:17,4,25:17:661:4,25:143,966:-74.2632,-67.7267,-120.844,0,-42.7152,-46.8427 0|1:65:42,0,20:42:1601:0,20:0,735:-47.4002,-60.0435,-191.377,0,-131.318,-125.298 0|1:38:20,0,17:20:784:0,17:0,645:-47.1219,-53.1425,-117.63,0,-64.7501,-59.6326 0|1:81:37,0,44:37:1432:0,44:0,1677:-126.782,-137.92,-255.548,0,-118.012,-104.767 dDocent_Contig_11402 12 . T C 1469.67 . AB=0.557895;ABP=5.77607;AC=4;AF=0.333333;AN=12;AO=54;CIGAR=1X;DP=128;DPB=128;DPRA=1.93333;EPP=120.27;EPPR=163.699;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.608108;PAO=0;PQA=0;PQR=0;PRO=0;QA=2054;QR=2815;RO=74;RPL=0;RPP=120.27;RPPR=163.699;RPR=54;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=74;SRP=163.699;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:14,23:14:531:23:890:-69.2705,0,-36.9919 0/1:8:4,4:4:160:4:158:-12.1924,0,-12.3756 0/1:20:10,10:10:389:10:355:-26.2578,0,-29.3443 0/1:30:14,16:14:539:16:613:-46.4685,0,-39.819 0/0:12:12,0:12:472:0:0:0,-3.61236,-42.8308 0/0:21:20,1:20:724:1:38:0,-2.52436,-61.6727 dDocent_Contig_11403 25 . T C 2171.03 . AB=0.334677;ABP=61.8852;AC=6;AF=0.5;AN=12;AO=83;CIGAR=1X;DP=248;DPB=248;DPRA=0;EPP=183.243;EPPR=359.132;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.698795;PAIREDR=0.817073;PAO=0;PQA=0;PQR=0;PRO=0;QA=3344;QR=6584;RO=164;RPL=0;RPP=183.243;RPPR=359.132;RPR=83;RUN=1;SAF=83;SAP=183.243;SAR=0;SRF=164;SRP=359.132;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:14,9:14:544:9:364:-26.2005,0,-42.3743 0/1:51:27,23:27:1089:23:928:-68.4282,0,-82.9007 0/1:20:15,5:15:609:5:203:-12.6322,0,-49.1265 0/1:55:47,8:47:1877:8:325:-13.063,0,-152.576 0/1:36:24,12:24:973:12:486:-33.2546,0,-77.0307 0/1:63:37,26:37:1492:26:1038:-74.7464,0,-115.558 dDocent_Contig_11404 49 . G T 51.2141 . AB=0.151515;ABP=37.8197;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=2X;DP=154;DPB=154;DPRA=1.70175;EPP=24.725;EPPR=315.702;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.9;PAIREDR=0.604167;PAO=0;PQA=0;PQR=0;PRO=0;QA=361;QR=5224;RO=144;RPL=10;RPP=24.725;RPPR=315.702;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=144;SRP=315.702;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:33:28,5:28:998:5:177:-6.34278,0,-80.1995 0|0:40:37,3:37:1318:3:110:0,-1.78019,-108.655 0|0:22:22,0:22:822:0:0:0,-6.62266,-74.2988 0|0:24:22,2:22:788:2:74:0,-0.199286,-64.2103 0|0:7:7,0:7:255:0:0:0,-2.10721,-23.301 0|0:28:28,0:28:1043:0:0:0,-8.42884,-94.1812 dDocent_Contig_11405 34 . A C 3834.66 . AB=0.430976;ABP=15.3007;AC=7;AF=0.583333;AN=12;AO=134;CIGAR=1X;DP=303;DPB=303;DPRA=0;EPP=293.988;EPPR=367.818;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.507463;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5338;QR=6674;RO=168;RPL=0;RPP=293.988;RPPR=367.818;RPR=134;RUN=1;SAF=134;SAP=293.988;SAR=0;SRF=168;SRP=367.818;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:86:56,30:56:2211:30:1218:-83.9988,0,-173.28 0/1:90:64,26:64:2556:26:1032:-66.0774,0,-203.084 0/1:43:20,23:20:780:23:923:-70.4286,0,-57.5653 0/1:61:22,39:22:886:39:1557:-122.003,0,-61.6867 1/1:6:0,6:0:0:6:211:-19.3188,-1.80618,0 0/1:17:6,10:6:241:10:397:-30.8609,0,-16.8415 dDocent_Contig_11406 12 . T C 2033.66 . AB=0.255435;ABP=98.6023;AC=8;AF=0.666667;AN=12;AO=75;CIGAR=1X;DP=212;DPB=212;DPRA=0;EPP=165.871;EPPR=300.502;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2929;QR=5277;RO=137;RPL=0;RPP=165.871;RPPR=300.502;RPR=75;RUN=1;SAF=75;SAP=165.871;SAR=0;SRF=137;SRP=300.502;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:65:49,16:49:1892:16:646:-38.9067,0,-150.93 0/1:51:28,23:28:1062:23:879:-64.0552,0,-80.5143 0/1:43:39,4:39:1493:4:159:-1.74654,0,-121.678 0/1:25:21,4:21:830:4:158:-7.07361,0,-67.4928 1/1:7:0,7:0:0:7:273:-24.9362,-2.10721,0 1/1:21:0,21:0:0:21:814:-73.5772,-6.32163,0 dDocent_Contig_11407 53 . A T 677.717 . AB=0.214286;ABP=62.5707;AC=7;AF=0.583333;AN=12;AO=28;CIGAR=1X;DP=94;DPB=94;DPRA=0;EPP=63.8115;EPPR=146.327;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.571429;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1111;QR=2641;RO=66;RPL=28;RPP=63.8115;RPPR=146.327;RPR=0;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=66;SRP=146.327;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:11:8,3:8:322:3:120:-7.87636,0,-26.0364 0/1:13:11,2:11:438:2:78:-3.48991,0,-35.8592 0/1:34:26,8:26:1036:8:312:-18.2084,0,-83.2977 0/1:23:20,3:20:805:3:122:-4.4488,0,-65.8446 1/1:10:0,10:0:0:10:398:-36.179,-3.0103,0 0/1:3:1,2:1:40:2:81:-6.78264,0,-3.09259 dDocent_Contig_11408 154 . A G 111.273 . AB=0.444444;ABP=3.25157;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=128;DPB=128;DPRA=0.378151;EPP=11.6962;EPPR=272.273;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=8.67362e-19;PAIRED=1;PAIREDR=0.975806;PAO=0;PQA=0;PQR=0;PRO=0;QA=163;QR=4607;RO=124;RPL=0;RPP=11.6962;RPPR=272.273;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=272.273;SRR=124;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:9:5,4:5:164:4:163:-12.3492,0,-12.3692 0/0:10:10,0:10:370:0:0:0,-3.0103,-33.6456 0/0:6:6,0:6:223:0:0:0,-1.80618,-20.4276 0/0:25:25,0:25:947:0:0:0,-7.52575,-85.5403 0/0:47:47,0:47:1761:0:0:0,-14.1484,-158.744 0/0:31:31,0:31:1142:0:0:0,-9.33193,-103.07 dDocent_Contig_11409 8 . T A 863.957 . AB=0.37931;ABP=17.6865;AC=6;AF=0.5;AN=12;AO=44;CIGAR=1X;DP=116;DPB=116;DPRA=0;EPP=98.5551;EPPR=157.185;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.886364;PAIREDR=0.84507;PAO=0;PQA=0;PQR=0;PRO=0;QA=1452;QR=2355;RO=71;RPL=0;RPP=98.5551;RPPR=157.185;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=71;SRP=157.185;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:18,8:18:611:8:272:-16.9797,0,-47.472 0/1:16:6,10:6:185:10:301:-22.5634,0,-12.1325 0/1:10:6,4:6:203:4:141:-10.0259,0,-15.5876 0/1:12:5,7:5:167:7:226:-17.0413,0,-11.742 0/1:34:23,10:23:824:10:339:-20.5225,0,-64.1594 0/1:18:13,5:13:365:5:173:-10.4848,0,-27.7026 dDocent_Contig_11410 8 . T C 7504.22 . AB=0.707572;ABP=146.344;AC=8;AF=0.666667;AN=12;AO=271;CIGAR=1M1X;DP=383;DPB=383;DPRA=0;EPP=591.479;EPPR=146.327;GTI=0;LEN=1;MEANALT=3.33333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9416;QR=2140;RO=66;RPL=0;RPP=591.479;RPPR=146.327;RPR=271;RUN=1;SAF=271;SAP=591.479;SAR=0;SRF=66;SRP=146.327;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:48:5,5,4,33:5:144:5,4,33:192,90,1156:-96.8425,-82.6789,-92.6193,-91.4635,-87.2392,-101.703,-4.25913,0,-8.83664,-5.77441 0|1:91:14,9,2,64:14:476:9,2,64:348,42,2243:-178.286,-155.061,-190.952,-179.327,-190.487,-217.323,0,-11.1558,-35.4456,-19.3482 0|1:57:7,1,2,47:7:218:1,2,47:37,35,1669:-133.962,-133.042,-150.242,-133.528,-148.001,-150.426,0,-14.5195,-15.0363,-3.40702 0|1:102:25,3,3,70:25:822:3,3,70:117,68,2320:-180.13,-178.036,-243.554,-182.443,-239.243,-247.96,0,-56.833,-61.2509,-45.386 0|1:31:7,0,1,23:7:233:0,1,23:0,21,847:-67.3008,-69.408,-88.2544,-67.8257,-86.6703,-86.3692,0,-18.9602,-17.3866,-12.0365 1|1:54:8,10,2,34:8:247:10,2,34:389,46,1181:-105.119,-76.2256,-93.0217,-103.995,-92.4992,-123.198,-11.5441,0,-27.8115,-21.1023 dDocent_Contig_11411 61 . C T 12697.1 . AB=0.815461;ABP=349.628;AC=8;AF=0.666666;AN=12;AO=392;CIGAR=1X3M;DP=467;DPB=467;DPRA=0;EPP=845.564;EPPR=144.156;GTI=0;LEN=1;MEANALT=1.66667;MQM=58.25;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.994898;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=15374;QR=2552;RO=65;RPL=392;RPP=854.227;RPPR=144.156;RPR=0;RUN=1;SAF=391;SAP=845.564;SAR=1;SRF=65;SRP=144.156;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:79:22,0,57:22:865:0,57:0,2187:-172.194,-178.817,-249.972,0,-71.5441,-54.3854 0|1:133:13,0,120:13:514:0,120:0,4588:-371.663,-375.577,-417.878,0,-42.695,-6.5714 0|1:59:9,0,49:9:353:0,49:0,1973:-158.82,-161.53,-190.557,0,-29.0577,-14.3072 0|1:110:21,0,88:21:820:0,88:0,3538:-282.053,-288.374,-355.78,0,-67.4264,-40.9357 1|1:20:0,7,13:0:0:7,13:257,498:-61.569,-40.609,-38.5018,-21.3301,0,-17.4167 1|1:66:0,0,65:0:0:0,65:0,2590:-232.636,-232.636,-232.636,-19.567,-19.567,0 dDocent_Contig_11412 8 . T C 2910.07 . AB=0.341346;ABP=93.9616;AC=2;AF=0.166667;AN=12;AO=144;CIGAR=1X;DP=1332;DPB=1332;DPRA=0.979198;EPP=315.702;EPPR=2578.38;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4724;QR=38685;RO=1186;RPL=0;RPP=315.702;RPPR=2578.38;RPR=144;RUN=1;SAF=144;SAP=315.702;SAR=0;SRF=1186;SRP=2578.38;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:313:312,0:312:9888:0:0:0,-93.9214,-889.546 0/0:243:241,2:241:7965:2:68:0,-66.6939,-710.358 0/0:97:96,0:96:3149:0:0:0,-28.8989,-283.379 0/0:263:263,0:263:8552:0:0:0,-79.1709,-769.619 0/1:180:136,44:136:4517:44:1419:-73.781,0,-352.464 0/1:236:138,98:138:4614:98:3237:-220.447,0,-344.331 dDocent_Contig_11413 53 . A G 1015.34 . AB=0.453333;ABP=4.429;AC=8;AF=0.666667;AN=12;AO=39;CIGAR=1X;DP=80;DPB=80;DPRA=0;EPP=87.6977;EPPR=92.0407;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1436;QR=1499;RO=41;RPL=39;RPP=87.6977;RPPR=92.0407;RPR=0;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=41;SRP=92.0407;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:13,18:13:465:18:674:-51.6578,0,-32.852 0/1:14:9,5:9:335:5:193:-13.5271,0,-26.2867 0/1:12:10,2:10:367:2:72:-3.22355,0,-29.7632 0/1:18:9,9:9:332:9:321:-23.8123,0,-24.8093 1/1:2:0,2:0:0:2:67:-6.36314,-0.60206,0 1/1:3:0,3:0:0:3:109:-10.1677,-0.90309,0 dDocent_Contig_11414 28 . T C 2747.89 . AB=0.0645161;ABP=105.14;AC=5;AF=0.416667;AN=12;AO=4;CIGAR=1X3M1X2M4D12M;DP=214;DPB=198.435;DPRA=0;EPP=11.6962;EPPR=124.613;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=0.75;PAIREDR=0.839286;PAO=0;PQA=0;PQR=0;PRO=0;QA=152;QR=2145;RO=56;RPL=0;RPP=11.6962;RPPR=124.613;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=56;SRP=124.613;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:22:4,0,16,1,0,1:4:155:0,16,1,0,1:0,610,39,0,40:-48.8179,-50.0221,-62.7571,0,-12.7292,-7.91271,-46.8158,-59.5509,-9.52331,-59.2499,-50.0221,-62.7571,-12.7292,-59.5509,-62.7571,-46.726,-59.4612,-9.43212,-56.255,-59.4612,-59.1602 0|1:46:14,0,14,0,5,13:14:546:0,14,0,5,13:0,543,0,198,489:-40.4006,-44.6151,-89.4974,0,-44.8843,-40.6698,-44.6151,-89.4974,-44.8843,-89.4974,-28.3161,-73.1994,-28.5855,-73.1994,-71.6942,-4.55642,-49.4371,-4.82626,-49.4371,-33.1392,-45.5237 0|0:33:16,0,4,0,10,2:16:625:0,4,0,10,2:0,140,0,393,71:-27.542,-32.3584,-83.7489,-20.9766,-72.3651,-71.1609,-32.3584,-83.7489,-72.3651,-83.7489,0,-51.4175,-40.0347,-51.4175,-48.4072,-26.5757,-77.9658,-66.5825,-77.9658,-45.6347,-77.3637 0|1:40:11,0,13,3,6,6:11:403:0,13,3,6,6:0,494,113,233,228:-37.1977,-40.509,-73.4394,0,-32.9274,-29.014,-31.2499,-64.1797,-23.6676,-63.2766,-21.3622,-54.2923,-13.7789,-45.0324,-52.4861,-21.811,-54.7403,-14.2279,-45.4806,-35.5927,-52.9341 1|0:24:2,2,11,0,4,5:2:78:2,11,0,4,5:80,428,0,158,188:-43.5541,-37.5648,-43.3748,-8.98128,-8.80107,-12.0821,-44.1562,-43.9769,-15.3935,-50.5681,-31.1528,-30.9732,-2.38831,-37.5648,-36.3607,-28.759,-28.5794,0,-35.1706,-22.1678,-33.6654 0|1:49:9,0,29,0,5,4:9:338:0,29,0,5,4:0,1111,0,199,157:-88.4983,-91.2075,-118.894,0,-27.702,-18.9721,-91.2075,-118.894,-27.702,-118.894,-74.8175,-102.505,-11.3018,-102.505,-101,-78.2926,-105.98,-14.7803,-105.98,-89.5902,-104.776 dDocent_Contig_11415 84 . T G 62.1535 . AB=0.140351;ABP=67.0497;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=252;DPB=252;DPRA=1.46154;EPP=20.3821;EPPR=530.678;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.25;PAIREDR=0.555556;PAO=0;PQA=0;PQR=0;PRO=0;QA=272;QR=8405;RO=243;RPL=8;RPP=20.3821;RPPR=530.678;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=243;SRP=530.678;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:688:0:0:0,-6.32163,-62.2247 0/0:62:62,0:62:2164:0:0:0,-18.6639,-195.03 0/0:15:15,0:15:525:0:0:0,-4.51545,-47.5811 0/1:57:48,8:48:1660:8:272:-7.73823,0,-132.624 0/0:40:40,0:40:1390:0:0:0,-12.0412,-125.394 0/0:57:57,0:57:1978:0:0:0,-17.1587,-178.296 dDocent_Contig_11416 21 . T C 15101.4 . AB=0.57907;ABP=49.7121;AC=6;AF=0.5;AN=12;AO=498;CIGAR=1X;DP=860;DPB=860;DPRA=0;EPP=1084.4;EPPR=789.083;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.951807;PAIREDR=0.997238;PAO=0;PQA=0;PQR=0;PRO=0;QA=19776;QR=14132;RO=362;RPL=0;RPP=1084.4;RPPR=789.083;RPR=498;RUN=1;SAF=498;SAP=1084.4;SAR=0;SRF=362;SRP=789.083;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:153:103,50:103:3966:50:1974:-131.808,0,-310.915 0/1:122:70,52:70:2711:52:2063:-149.136,0,-207.413 0/1:83:39,44:39:1553:44:1758:-133.448,0,-115.028 0/1:133:71,62:71:2791:62:2480:-183.311,0,-211.288 0/1:155:45,110:45:1773:110:4388:-348.218,0,-113.14 0/1:214:34,180:34:1338:180:7113:-575.443,0,-56.2667 dDocent_Contig_11417 29 . T G 34690.2 . AB=0.868878;ABP=751.153;AC=7;AF=0.583333;AN=12;AO=1058;CIGAR=1X;DP=1227;DPB=1227;DPRA=4.51923;EPP=2300.43;EPPR=369.989;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=42132;QR=6760;RO=169;RPL=0;RPP=2300.43;RPPR=369.989;RPR=1058;RUN=1;SAF=1058;SAP=2300.43;SAR=0;SRF=169;SRP=369.989;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:231:34,197:34:1350:197:7840:-635.659,0,-52.2272 1/1:426:25,401:25:1017:401:15964:-1343.7,-36.4175,0 1/1:116:9,107:9:362:107:4284:-352.56,-1.97785,0 0/1:383:46,337:46:1822:337:13396:-1089.38,0,-48.8971 0/0:52:52,0:52:2088:0:0:0,-15.6536,-188.102 0/1:19:3,16:3:121:16:648:-52.9336,0,-5.56063 dDocent_Contig_11418 45 . T C 79.4468 . AB=0.285714;ABP=8.59409;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=93;DPB=93;DPRA=0.886076;EPP=11.6962;EPPR=196.271;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.94382;PAO=0;PQA=0;PQR=0;PRO=0;QA=148;QR=3246;RO=89;RPL=0;RPP=11.6962;RPPR=196.271;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=196.271;SRR=89;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:259:0:0:0,-2.10721,-23.6661 0/0:14:14,0:14:508:0:0:0,-4.21442,-46.0577 0/0:25:25,0:25:918:0:0:0,-7.52575,-82.9405 0/1:14:10,4:10:369:4:148:-9.46755,0,-29.3452 0/0:11:11,0:11:405:0:0:0,-3.31133,-36.7972 0/0:22:22,0:22:787:0:0:0,-6.62266,-71.1512 dDocent_Contig_11419 18 . A T 896.226 . AB=0.52459;ABP=3.33068;AC=3;AF=0.3;AN=10;AO=32;CIGAR=1X;DP=102;DPB=102;DPRA=0.99187;EPP=72.4974;EPPR=155.013;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1247;QR=2718;RO=70;RPL=0;RPP=72.4974;RPPR=155.013;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=70;SRP=155.013;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:13:13,0:13:515:0:0:0,-3.91339,-46.698 0/1:22:8,14:8:312:14:560:-44.1215,0,-21.8216 0/1:9:6,3:6:236:3:116:-8.10843,0,-18.9034 0/1:30:15,15:15:579:15:571:-42.6937,0,-43.419 0/0:28:28,0:28:1076:0:0:0,-8.42884,-97.1401 ./.:.:.:.:.:.:.:. dDocent_Contig_11421 22 . T C 59.8449 . AB=0.147059;ABP=39.7976;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X2M1X;DP=184;DPB=184;DPRA=1.13333;EPP=13.8677;EPPR=376.553;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.6;PAIREDR=0.75;PAO=0;PQA=0;PQR=0;PRO=0;QA=194;QR=6743;RO=176;RPL=0;RPP=13.8677;RPPR=385.189;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=175;SRP=376.553;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:35:34,0:34:1295:0:0:0,-10.235,-116.44 0|0:33:33,0:33:1241:0:0:0,-9.93399,-111.971 0|0:22:22,0:22:845:0:0:0,-6.62266,-76.3682 0|0:32:32,0:32:1214:0:0:0,-9.63296,-109.549 0|0:28:27,0:27:1055:0:0:0,-8.12781,-94.8422 0|1:34:28,5:28:1093:5:194:-7.50737,0,-88.3387 dDocent_Contig_11422 25 . A G 275.635 . AB=0.22807;ABP=39.6206;AC=3;AF=0.25;AN=12;AO=13;CIGAR=1X;DP=103;DPB=103;DPRA=1.23913;EPP=31.2394;EPPR=196.271;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.384615;PAIREDR=0.359551;PAO=0;PQA=0;PQR=0;PRO=0;QA=526;QR=3500;RO=89;RPL=0;RPP=31.2394;RPPR=196.271;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=89;SRP=196.271;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:22,2:22:868:2:82:-0.554958,0,-71.209 0/1:14:6,8:6:233:8:324:-25.315,0,-17.123 0/1:19:16,3:16:639:3:120:-5.46774,0,-52.1237 0/0:17:17,0:17:655:0:0:0,-5.11751,-59.2762 0/0:15:15,0:15:595:0:0:0,-4.51545,-53.8881 0/0:14:13,0:13:510:0:0:0,-3.91339,-46.1261 dDocent_Contig_11425 200 . C T 1333.06 . AB=0.45045;ABP=5.3774;AC=4;AF=0.4;AN=10;AO=51;CIGAR=1X;DP=125;DPB=125;DPRA=0;EPP=113.755;EPPR=163.699;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1957;QR=2844;RO=74;RPL=51;RPP=113.755;RPPR=163.699;RPR=0;RUN=1;SAF=0;SAP=113.755;SAR=51;SRF=0;SRP=163.699;SRR=74;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:8:2,6:2:78:6:234:-19.0229,0,-4.99523 0/1:26:20,6:20:780:6:234:-13.6043,0,-62.701 0/0:14:13,1:13:495:1:39:0,-0.317855,-40.9991 0/1:58:28,30:28:1081:30:1143:-85.7073,0,-80.1334 ./.:.:.:.:.:.:.:. 0/1:19:11,8:11:410:8:307:-22.2716,0,-31.5257 dDocent_Contig_11426 9 . T A 1008.18 . AB=0.374046;ABP=21.0617;AC=5;AF=0.416667;AN=12;AO=49;CIGAR=1X;DP=147;DPB=147;DPRA=1.6375;EPP=109.412;EPPR=215.815;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.959184;PAO=0;PQA=0;PQR=0;PRO=0;QA=1643;QR=3218;RO=98;RPL=0;RPP=109.412;RPPR=215.815;RPR=49;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=98;SRP=215.815;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:17,4:17:524:4:123:-5.05157,0,-41.1285 0/0:16:16,0:16:499:0:0:0,-4.81648,-45.2042 0/1:30:13,17:13:464:17:561:-41.762,0,-33.0648 0/1:29:19,10:19:642:10:361:-24.1023,0,-49.3572 0/1:26:20,6:20:666:6:222:-12.5102,0,-52.4178 0/1:25:13,12:13:423:12:376:-26.6132,0,-30.8488 dDocent_Contig_11427 8 . G A 17820.2 . AB=0.110727;ABP=383.394;AC=1;AF=0.0833333;AN=12;AO=32;CIGAR=2X;DP=768;DPB=768;DPRA=2.02807;EPP=72.4974;EPPR=274.444;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1155;QR=4046;RO=125;RPL=0;RPP=72.4974;RPPR=274.444;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=125;SRP=274.444;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:63:55,0,8:55:1748:0,8:0,287:-7.20586,-23.7625,-164.424,0,-141.015,-138.607 0|0:102:2,0,100:2:66:0,100:0,3516:-310.328,-310.93,-316.266,-24.4371,-30.103,0 0|0:62:15,0,47:15:533:0,47:0,1647:-129.82,-134.335,-177.763,0,-43.782,-29.6336 0|0:69:11,0,58:11:366:0,58:0,1972:-156.937,-160.248,-189.857,0,-29.9429,-12.4831 1|0:289:31,32,226:31:972:32,226:1155,8178:-674.33,-589.416,-657.892,-16.1789,0,-26.2373 0|0:183:11,0,172:11:361:0,172:0,6038:-510.619,-513.931,-543.092,-22.2869,-51.7772,0 dDocent_Contig_11428 7 . G A 1790.43 . AB=0;ABP=0;AC=4;AF=0.333333;AN=12;AO=53;CIGAR=1X;DP=100;DPB=100;DPRA=2.57143;EPP=118.098;EPPR=102.898;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=4.33681e-19;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1993;QR=1552;RO=46;RPL=0;RPP=118.098;RPPR=102.898;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=46;SRP=102.898;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:333:0:0:0,-3.0103,-30.2871 0/0:20:18,1:18:619:1:19:0,-3.9696,-54.1442 0/0:9:9,0:9:297:0:0:0,-2.70927,-27.0409 0/0:9:9,0:9:303:0:0:0,-2.70927,-27.5929 1/1:15:0,15:0:0:15:545:-49.3753,-4.51545,0 1/1:37:0,37:0:0:37:1429:-128.89,-11.1381,0 dDocent_Contig_11429 12 . T C 801.742 . AB=0.280576;ABP=61.1401;AC=4;AF=0.333333;AN=12;AO=39;CIGAR=1X;DP=149;DPB=149;DPRA=6.95;EPP=87.6977;EPPR=241.872;GTI=0;LEN=1;MEANALT=1;MQM=57.2308;MQMR=59.8364;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.974359;PAIREDR=0.963636;PAO=0;PQA=0;PQR=0;PRO=0;QA=1480;QR=3984;RO=110;RPL=0;RPP=87.6977;RPPR=241.872;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=110;SRP=241.872;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:17:14,3:14:500:3:116:-5.70019,0,-40.1963 0/1:47:41,6:41:1531:6:215:-5.54589,0,-123.913 0/1:34:23,11:23:793:11:431:-23.551,0,-61.4315 0/1:41:22,19:22:783:19:718:-52.5988,0,-58.4381 0/0:4:4,0:4:147:0:0:0,-1.20412,-13.5893 0/0:6:6,0:6:230:0:0:0,-1.80618,-21.0663 dDocent_Contig_11430 7 . G A 2897.13 . AB=0.451477;ABP=7.85717;AC=4;AF=0.333333;AN=12;AO=107;CIGAR=1X;DP=253;DPB=253;DPRA=7.40625;EPP=235.358;EPPR=309.188;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4071;QR=4371;RO=141;RPL=0;RPP=235.358;RPPR=309.188;RPR=107;RUN=1;SAF=107;SAP=235.358;SAR=0;SRF=141;SRP=309.188;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:84:44,40:44:1375:40:1531:-112.774,0,-98.7126 0/1:44:23,20:23:632:20:760:-55.4849,0,-43.8959 0/1:63:31,30:31:948:30:1125:-83.0612,0,-67.1021 0/1:46:28,17:28:912:17:655:-45.6151,0,-68.6971 0/0:5:5,0:5:181:0:0:0,-1.50515,-16.642 0/0:11:10,0:10:323:0:0:0,-3.0103,-29.1196 dDocent_Contig_11431 18 . A G 45.0761 . AB=0.114754;ABP=81.6461;AC=1;AF=0.0833333;AN=12;AO=35;CIGAR=1X;DP=770;DPB=770;DPRA=0;EPP=79.0118;EPPR=1573.09;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9633;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.208163;PAO=0;PQA=0;PQR=0;PRO=0;QA=1315;QR=28454;RO=735;RPL=0;RPP=79.0118;RPPR=1599.04;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=732;SRP=1573.09;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:152:149,3:149:5797:3:104:0,-36.0546,-511.922 0/0:216:211,5:211:8170:5:189:0,-47.6493,-717.63 0/0:117:112,5:112:4366:5:174:0,-19.2252,-376.932 0/0:153:140,13:140:5398:13:505:0,-0.26119,-439.979 0/1:61:54,7:54:2068:7:267:-6.03008,0,-167.977 0/0:71:69,2:69:2655:2:76:0,-14.1585,-231.903 dDocent_Contig_11432 28 . C G 111.879 . AB=0.333333;ABP=3.73412;AC=3;AF=0.25;AN=12;AO=7;CIGAR=1X;DP=104;DPB=104;DPRA=2.25;EPP=18.2106;EPPR=213.643;GTI=0;LEN=1;MEANALT=1;MQM=58.8571;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=241;QR=3284;RO=97;RPL=0;RPP=18.2106;RPPR=213.643;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=97;SRP=213.643;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:243:0:0:0,-2.10721,-22.2088 0/0:66:63,3:63:2152:3:101:0,-10.4472,-184.532 0/0:12:12,0:12:378:0:0:0,-3.61236,-34.3243 0/1:3:2,1:2:70:1:35:-2.59554,0,-5.74431 0/0:13:13,0:13:441:0:0:0,-3.91339,-40.0111 1/1:3:0,3:0:0:3:105:-9.79616,-0.90309,0 dDocent_Contig_11434 79 . C G 67.0271 . AB=0.147059;ABP=76.5849;AC=3;AF=0.25;AN=12;AO=11;CIGAR=1X6M;DP=114;DPB=114;DPRA=1.33871;EPP=26.8965;EPPR=217.986;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=367;QR=3222;RO=99;RPL=11;RPP=26.8965;RPPR=217.986;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=99;SRP=217.986;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:5:5,0,0:5:167:0,0:0,0:0,-1.50515,-15.3596,-1.50515,-15.3596,-15.3596 0|1:48:42,0,5:42:1363:0,5:0,171:-1.4629,-14.1062,-124.123,0,-110.241,-108.735 0|0:15:14,0,1:14:456:0,1:0,33:0,-4.21442,-41.0236,-1.21631,-38.3551,-38.0541 0|1:5:3,0,2:3:98:0,2:0,62:-4.3837,-5.28679,-13.2115,0,-8.24128,-7.63922 0|0:26:26,0,0:26:847:0,0:0,0:0,-7.82678,-76.5345,-7.82678,-76.5345,-76.5345 0|1:15:9,2,3:9:291:2,3:67,101:-5.51983,-2.78126,-25.6902,0,-18.0992,-22.6285 dDocent_Contig_11435 29 . G C 73.6328 . AB=0.294118;ABP=9.26925;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=133;DPB=133;DPRA=1.2439;EPP=16.0391;EPPR=278.787;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=0.833333;PAIREDR=0.622047;PAO=0;PQA=0;PQR=0;PRO=0;QA=184;QR=4404;RO=127;RPL=0;RPP=16.0391;RPPR=278.787;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=127;SRP=278.787;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:17:12,5:12:416:5:149:-8.58513,0,-32.6551 0/0:29:29,0:29:1016:0:0:0,-8.72987,-91.7512 0/0:11:11,0:11:375:0:0:0,-3.31133,-34.0793 0/0:34:33,1:33:1152:1:35:0,-6.73639,-100.481 0/0:24:24,0:24:803:0:0:0,-7.22472,-72.5751 0/0:18:18,0:18:642:0:0:0,-5.41854,-58.1055 dDocent_Contig_11436 129 . C T 56.2227 . AB=0;ABP=0;AC=2;AF=0.2;AN=10;AO=2;CIGAR=1X3M1I9M;DP=62;DPB=62.2308;DPRA=0.133333;EPP=7.35324;EPPR=131.127;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=8.67362e-19;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=55;QR=2060;RO=59;RPL=0;RPP=7.35324;RPPR=131.127;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=131.127;SRR=59;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:14:14,0:14:496:0:0:0,-4.21442,-44.974 0|0:10:10,0:10:354:0:0:0,-3.0103,-32.1999 0|0:21:21,0:21:735:0:0:0,-6.32163,-66.471 0|0:15:14,0:14:475:0:0:0,-4.21442,-42.7237 1|1:2:0,2:0:0:2:55:-5.22411,-0.60206,0 .:.:.:.:.:.:.:. dDocent_Contig_11437 39 . T C 265.128 . AB=0;ABP=0;AC=2;AF=0.2;AN=10;AO=7;CIGAR=1X;DP=125;DPB=125;DPRA=0.237288;EPP=18.2106;EPPR=259.244;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=286;QR=4748;RO=118;RPL=0;RPP=18.2106;RPPR=259.244;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=118;SRP=259.244;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1663:0:0:0,-12.3422,-149.888 0/0:28:28,0:28:1120:0:0:0,-8.42884,-101.083 0/0:25:25,0:25:1021:0:0:0,-7.52575,-92.1794 0/0:24:24,0:24:944:0:0:0,-7.22472,-85.2513 ./.:.:.:.:.:.:.:. 1/1:7:0,7:0:0:7:286:-26.1148,-2.10721,0 dDocent_Contig_11438 13 . A C 656.065 . AB=0.236641;ABP=81.9292;AC=5;AF=0.416667;AN=12;AO=32;CIGAR=1X1M;DP=147;DPB=147;DPRA=0;EPP=72.4974;EPPR=241.872;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=0.6875;PAIREDR=0.563636;PAO=0;PQA=0;PQR=0;PRO=0;QA=1282;QR=4288;RO=110;RPL=0;RPP=72.4974;RPPR=241.872;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=110;SRP=241.872;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:26:23,0,3:23:894:0,3:0,123:-3.63801,-10.5617,-84.003,0,-73.8483,-72.9452 0|1:18:12,2,4:12:473:2,4:81,150:-8.65352,-5.57679,-43.9025,0,-32.2236,-37.7002 0|1:43:34,3,6:34:1319:3,6:120,243:-9.80578,-10.1578,-117.594,0,-98.4571,-106.537 0|0:16:15,0,1:15:589:0,1:0,41:0,-4.51545,-52.9407,-0.721913,-49.5556,-49.2545 0|1:19:4,0,15:4:137:0,15:0,606:-49.1585,-50.3627,-61.4647,0,-11.4572,-6.94173 0|1:25:22,0,3:22:876:0,3:0,119:-3.56875,-10.1914,-82.326,0,-72.531,-71.6279 dDocent_Contig_11439 27 . C T 86.2383 . AB=0.2;ABP=22.5536;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=115;DPB=115;DPRA=1.38889;EPP=13.8677;EPPR=241.872;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=189;QR=4353;RO=110;RPL=0;RPP=13.8677;RPPR=241.872;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=110;SRP=241.872;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:20,5:20:789:5:189:-9.84549,0,-63.8024 0/0:16:16,0:16:636:0:0:0,-4.81648,-57.5729 0/0:22:22,0:22:865:0:0:0,-6.62266,-78.1629 0/0:40:40,0:40:1580:0:0:0,-12.0412,-142.429 0/0:2:2,0:2:82:0:0:0,-0.60206,-7.77968 0/0:10:10,0:10:401:0:0:0,-3.0103,-36.4497 dDocent_Contig_11440 98 . N A 197.185 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=198;QR=0;RO=0;RPL=6;RPP=16.0391;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:30:-2.99957,-0.30103,0 1/1:2:0,2:0:0:2:66:-6.26836,-0.60206,0 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11441 32 . T C 526.539 . AB=0.133333;ABP=90.593;AC=6;AF=0.5;AN=12;AO=10;CIGAR=1X3M;DP=183;DPB=183;DPRA=0.215517;EPP=24.725;EPPR=311.359;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=385;QR=5619;RO=142;RPL=0;RPP=24.725;RPPR=311.359;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=142;SRP=311.359;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:21:16,2,3:16:643:2,3:56,104:-3.67227,-4.08054,-56.5124,0,-48.6743,-52.1925 0|1:29:18,6,5:18:692:6,5:224,200:-12.9058,0,-54.9835,-1.83749,-40.3115,-57.1424 0|1:20:12,7,1:12:479:7,1:271,40:-18.6369,0,-37.3421,-18.9526,-36.1542,-58.1092 0|1:21:16,5,0:16:625:5,0:175,0:-9.76574,0,-50.2591,-14.5822,-51.7643,-65.9871 1|1:5:0,4,1:0:0:4,1:159,41:-16.8739,-3.79354,-2.58942,-13.4873,0,-13.1863 0|0:87:80,7,0:80:3180:7,0:284,0:0,-0.255615,-260.355,-24.0824,-262.463,-285.885 dDocent_Contig_11442 18 . G A 16120.6 . AB=0.483871;ABP=3.99096;AC=8;AF=0.666667;AN=12;AO=496;CIGAR=1X;DP=725;DPB=725;DPRA=0;EPP=1080.06;EPPR=500.277;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.995968;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=19645;QR=8966;RO=229;RPL=0;RPP=1080.06;RPPR=500.277;RPR=496;RUN=1;SAF=496;SAP=1080.06;SAR=0;SRF=229;SRP=500.277;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:71:54,17:54:2105:17:670:-39.2593,0,-168.258 0/1:101:39,62:39:1503:62:2430:-188.459,0,-105.115 0/1:76:39,37:39:1542:37:1485:-111.021,0,-116.14 0/1:186:92,94:92:3614:94:3734:-280.092,0,-269.315 1/1:219:0,219:0:0:219:8695:-782.08,-65.9256,0 1/1:72:5,67:5:202:67:2631:-218.374,-3.11229,0 dDocent_Contig_11443 132 . T C 103.901 . AB=0.153846;ABP=70.66;AC=1;AF=0.125;AN=8;AO=15;CIGAR=1X;DP=255;DPB=255;DPRA=0;EPP=35.5824;EPPR=524.164;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=523;QR=8057;RO=240;RPL=0;RPP=35.5824;RPPR=524.164;RPR=15;RUN=1;SAF=0;SAP=35.5824;SAR=15;SRF=0;SRP=524.164;SRR=240;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:42,2:42:1412:2:70:0,-6.59792,-120.722 0/0:109:107,2:107:3605:2:70:0,-26.1649,-318.024 0/0:37:36,1:36:1198:1:35:0,-7.63948,-104.618 0/1:65:55,10:55:1842:10:348:-12.089,0,-146.492 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11444 8 . G C 37.1064 . AB=0.123894;ABP=141.85;AC=4;AF=0.333333;AN=12;AO=15;CIGAR=1X;DP=186;DPB=186;DPRA=1.288;EPP=35.5824;EPPR=374.332;GTI=0;LEN=1;MEANALT=1;MQM=55.6;MQMR=58.7953;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.766082;PAO=0;PQA=0;PQR=0;PRO=0;QA=501;QR=5812;RO=171;RPL=0;RPP=35.5824;RPPR=374.332;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=171;SRP=374.332;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:18,2:18:598:2:65:-0.152847,0,-48.1037 0/1:34:30,4:30:1006:4:132:-1.97026,0,-80.592 0/0:48:47,1:47:1618:1:15:0,-12.9495,-143.157 0/0:25:25,0:25:816:0:0:0,-7.52575,-72.3714 0/1:30:26,4:26:900:4:153:-3.01815,0,-72.2683 0/1:29:25,4:25:874:4:136:-3.84371,0,-70.2298 dDocent_Contig_11445 43 . T C 9911.54 . AB=0.0730435;ABP=1823.88;AC=5;AF=0.416667;AN=12;AO=95;CIGAR=2X3M1X;DP=1305;DPB=1307.33;DPRA=0;EPP=209.3;EPPR=893.314;GTI=0;LEN=1;MEANALT=11.8333;MQM=59.7263;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0.336842;PAIREDR=0.290244;PAO=0;PQA=0;PQR=0;PRO=0;QA=3290;QR=13876;RO=410;RPL=0;RPP=209.3;RPPR=893.314;RPR=95;RUN=1;SAF=95;SAP=209.3;SAR=0;SRF=410;SRP=893.314;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:208:86,15,46,25,27:86:2881:15,46,25,27:499,1532,894,913:-98.0951,-83.6063,-312.402,0,-192.932,-219.462,-51.083,-244.019,-160.411,-276.871,-49.968,-242.902,-159.294,-210.381,-275.152 0|0:372:128,49,76,13,78:128:4372:49,76,13,78:1660,2442,418,2540:-166.516,-74.3327,-414.395,-8.21917,-232.318,-340.153,-171.672,-395.771,-329.657,-522.571,0,-224.1,-157.987,-321.438,-331.333 0|0:176:67,20,27,12,38:67:2223:20,27,12,38:693,914,430,1310:-86.2464,-50.0905,-223.893,-32.3138,-155.81,-204.008,-71.3445,-194.843,-177.065,-247.556,0,-123.497,-105.719,-144.751,-168.383 0|1:226:81,25,70,11,22:81:2740:25,70,11,22:863,2311,363,746:-162.464,-116.73,-331.336,0,-152.013,-201.058,-157.5,-309.514,-192.783,-376.32,-126.352,-278.366,-161.635,-319.136,-341.86 1|1:155:8,10,107,11,2:8:278:10,107,11,2:339,3518,383,70:-291.509,-266.434,-286.027,-9.6035,-4.72472,0,-262.771,-257.892,-1.05906,-282.063,-288.221,-283.342,-26.5136,-279.679,-310.222 0|1:168:40,13,77,23,9:40:1382:13,77,23,9:455,2565,802,309:-195.546,-170.569,-278.945,0,-75.2697,-89.1081,-142.359,-217.63,-47.06,-247.724,-182.496,-257.767,-87.1965,-229.557,-292.075 dDocent_Contig_11446 15 . G C 4023.48 . AB=0.586957;ABP=18.1162;AC=6;AF=0.5;AN=12;AO=135;CIGAR=1X;DP=230;DPB=230;DPRA=0;EPP=296.159;EPPR=209.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.703704;PAIREDR=0.852632;PAO=0;PQA=0;PQR=0;PRO=0;QA=5344;QR=3684;RO=95;RPL=0;RPP=296.159;RPPR=209.3;RPR=135;RUN=1;SAF=135;SAP=296.159;SAR=0;SRF=95;SRP=209.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:19,18:19:765:18:718:-53.8061,0,-58.0318 0/1:39:19,20:19:748:20:786:-59.3167,0,-55.9003 0/1:26:13,13:13:473:13:528:-40.0392,0,-35.0583 0/1:31:5,26:5:200:26:1042:-84.7424,0,-9.04761 0/1:43:14,29:14:547:29:1135:-89.4875,0,-36.6282 0/1:54:25,29:25:951:29:1135:-86.1783,0,-69.6268 dDocent_Contig_11447 112 . A G 1030.01 . AB=0.54321;ABP=4.32391;AC=2;AF=0.25;AN=8;AO=44;CIGAR=1X;DP=132;DPB=132;DPRA=1.58824;EPP=98.5551;EPPR=189.757;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1444;QR=2571;RO=86;RPL=0;RPP=98.5551;RPPR=189.757;RPR=44;RUN=1;SAF=0;SAP=98.5551;SAR=44;SRF=0;SRP=189.757;SRR=86;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 0/1:41:11,30:11:320:30:999:-77.8707,0,-16.7422 0/1:40:25,14:25:747:14:445:-28.5278,0,-55.6962 0/0:16:15,0:15:450:0:0:0,-4.51545,-40.7078 ./.:.:.:.:.:.:.:. 0/0:35:35,0:35:1054:0:0:0,-10.536,-95.1383 dDocent_Contig_11449 115 . A G 32.4048 . AB=0.4;ABP=3.44459;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=1X;DP=67;DPB=67;DPRA=0.403226;EPP=7.35324;EPPR=144.156;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=66;QR=2115;RO=65;RPL=0;RPP=7.35324;RPPR=144.156;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=144.156;SRR=65;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:4:4,0:4:134:0:0:0,-1.20412,-12.3911 0/0:28:28,0:28:938:0:0:0,-8.42884,-84.7279 0/0:5:5,0:5:151:0:0:0,-1.50515,-13.8877 0/0:7:7,0:7:241:0:0:0,-2.10721,-22.0264 0/0:18:18,0:18:566:0:0:0,-5.41854,-51.2396 0/1:5:3,2:3:85:2:66:-4.76303,0,-6.42608 dDocent_Contig_11450 7 . G C 4826.74 . AB=0.177658;ABP=1344.13;AC=6;AF=0.5;AN=12;AO=264;CIGAR=1X1M;DP=1486;DPB=1486;DPRA=0;EPP=576.279;EPPR=2359.06;GTI=0;LEN=1;MEANALT=3.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10002;QR=35259;RO=1085;RPL=0;RPP=576.279;RPPR=2359.06;RPR=264;RUN=1;SAF=264;SAP=576.279;SAR=0;SRF=1085;SRP=2359.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:299:208,41,42:208:6907:41,42:1551,1598:-68.4615,-3.91943,-550.27,0,-431.547,-546.052 0|1:271:179,8,78:179:5696:8,78:309,2903:-183.752,-212.255,-668.343,0,-433.154,-435.055 0|1:222:163,20,30:163:5288:20,30:740,1151:-45.4442,-33.9683,-454.557,0,-366.091,-417.599 0|1:225:134,18,61:134:4396:18,61:692,2328:-150.71,-134.228,-483.9,0,-298.311,-336.768 0|1:241:207,0,29:207:6630:0,29:0,1095:-27.6393,-89.9526,-624.037,0,-534.292,-525.562 0|1:228:194,0,24:194:6342:0,24:0,927:-17.8889,-76.2887,-588.392,0,-512.249,-505.024 dDocent_Contig_11451 1 . N G 63.6076 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=67;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:67:-6.35967,-0.60206,0 dDocent_Contig_11452 8 . G A 822.195 . AB=0.278481;ABP=70.3534;AC=5;AF=0.416667;AN=12;AO=45;CIGAR=1X;DP=186;DPB=186;DPRA=0;EPP=100.727;EPPR=309.188;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1544;QR=4686;RO=141;RPL=0;RPP=100.727;RPPR=309.188;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=141;SRP=309.188;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:46:32,14:32:1025:14:505:-31.9366,0,-78.6774 0/1:56:42,14:42:1382:14:478:-26.48,0,-107.79 0/0:28:27,1:27:931:1:18:0,-6.62887,-82.2851 0/1:30:22,8:22:754:8:257:-14.4061,0,-59.1335 0/1:12:9,3:9:282:3:115:-7.11253,0,-22.0703 0/1:14:9,5:9:312:5:171:-11.5061,0,-24.1994 dDocent_Contig_11454 54 . T A 3921.91 . AB=0.09375;ABP=48.8827;AC=0;AF=0;AN=12;AO=3;CIGAR=1X2M1X;DP=257;DPB=257;DPRA=0;EPP=9.52472;EPPR=213.643;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.917526;PAO=0;PQA=0;PQR=0;PRO=0;QA=95;QR=3385;RO=97;RPL=3;RPP=9.52472;RPPR=213.643;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=97;SRP=213.643;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:32:13,3,16:13:453:3,16:95,552:-40.956,-37.2289,-73.1685,0,-29.2279,-32.0504 0|0:61:24,0,37:24:814:0,37:0,1262:-95.5153,-102.74,-168.747,0,-66.3472,-55.2091 0|0:39:15,0,24:15:528:0,24:0,850:-65.0739,-69.5894,-112.572,0,-43.3356,-36.1109 0|0:85:37,0,47:37:1307:0,47:0,1546:-113.796,-124.934,-231.386,0,-106.454,-92.3058 0|0:13:2,0,11:2:70:0,11:0,373:-29.9844,-30.5865,-36.2837,0,-6.04534,-2.73401 0|0:27:6,0,21:6:213:0,21:0,732:-58.0744,-59.8805,-77.2374,0,-17.7103,-11.3887 dDocent_Contig_11455 191 . C T 337.908 . AB=0.309524;ABP=16.2459;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=93;DPB=93;DPRA=5.15385;EPP=33.4109;EPPR=174.557;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.928571;PAIREDR=0.759494;PAO=0;PQA=0;PQR=0;PRO=0;QA=570;QR=3166;RO=79;RPL=14;RPP=33.4109;RPPR=174.557;RPR=0;RUN=1;SAF=0;SAP=33.4109;SAR=14;SRF=0;SRP=174.557;SRR=79;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:286:0:0:0,-2.10721,-26.1148 0/0:10:10,0:10:397:0:0:0,-3.0103,-36.0878 0/0:5:5,0:5:202:0:0:0,-1.50515,-18.5621 0/0:4:4,0:4:159:0:0:0,-1.20412,-14.6908 0/0:25:24,1:24:958:1:41:0,-3.43118,-82.4247 0/1:42:29,13:29:1164:13:529:-35.3136,0,-92.3951 dDocent_Contig_11456 45 . A T 272.387 . AB=0.354839;ABP=8.68415;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=66;DPB=66;DPRA=1.77143;EPP=26.8965;EPPR=122.441;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=434;QR=2227;RO=55;RPL=0;RPP=26.8965;RPPR=122.441;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=55;SRP=122.441;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:15:8,7:8:323:7:286:-21.5994,0,-24.9237 0/0:5:5,0:5:196:0:0:0,-1.50515,-18.0139 0/0:11:11,0:11:448:0:0:0,-3.31133,-40.676 0/1:16:12,4:12:487:4:148:-8.86114,0,-39.365 0/0:9:9,0:9:365:0:0:0,-2.70927,-33.2151 0/0:10:10,0:10:408:0:0:0,-3.0103,-37.0806 dDocent_Contig_11457 11 . T A 730.599 . AB=0.278261;ABP=52.1233;AC=1;AF=0.0833333;AN=12;AO=32;CIGAR=2X;DP=443;DPB=443;DPRA=1.75305;EPP=72.4974;EPPR=893.314;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=59.9854;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.84878;PAO=0;PQA=0;PQR=0;PRO=0;QA=1211;QR=15755;RO=410;RPL=0;RPP=72.4974;RPPR=893.314;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=410;SRP=893.314;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:50:50,0:50:1937:0:0:0,-15.0515,-174.55 0|0:139:139,0:139:5322:0:0:0,-41.8432,-478.912 0|0:31:31,0:31:1194:0:0:0,-9.33193,-107.744 0|0:63:63,0:63:2397:0:0:0,-18.9649,-215.908 0|1:115:82,32:82:3156:32:1211:-74.5828,0,-249.457 0|0:45:45,0:45:1749:0:0:0,-13.5463,-157.645 dDocent_Contig_11458 30 . A G 169.635 . AB=0.117949;ABP=250.235;AC=2;AF=0.166667;AN=12;AO=31;CIGAR=1X;DP=473;DPB=473;DPRA=2.83099;EPP=70.3259;EPPR=960.63;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=59.7868;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99093;PAO=0;PQA=0;PQR=0;PRO=0;QA=1182;QR=17329;RO=441;RPL=0;RPP=70.3259;RPPR=960.63;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=441;SRP=960.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:108:101,7:101:3966:7:273:0,-7.57768,-332.028 0/0:99:97,1:97:3772:1:40:0,-25.9048,-335.518 0/1:103:93,10:93:3673:10:388:-4.26629,0,-298.322 0/1:92:79,13:79:3110:13:481:-15.9187,0,-251.927 0/0:47:47,0:47:1855:0:0:0,-14.1484,-167.159 0/0:24:24,0:24:953:0:0:0,-7.22472,-85.8037 dDocent_Contig_11459 8 . G A 518.63 . AB=0.358209;ABP=14.7103;AC=2;AF=0.166667;AN=12;AO=30;CIGAR=1X;DP=264;DPB=264;DPRA=0.710345;EPP=68.1545;EPPR=511.135;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.9;PAIREDR=0.905983;PAO=0;PQA=0;PQR=0;PRO=0;QA=1040;QR=8096;RO=234;RPL=0;RPP=68.1545;RPPR=511.135;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=234;SRP=511.135;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:41,3:41:1402:3:99:0,-4.00802,-117.219 0/0:58:58,0:58:2055:0:0:0,-17.4597,-185.19 0/0:39:38,1:38:1316:1:39:0,-7.84361,-114.82 0/0:56:54,2:54:1907:2:73:0,-9.92698,-164.951 0/1:36:20,16:20:658:16:551:-39.065,0,-48.6815 0/1:31:23,8:23:758:8:278:-16.0199,0,-59.1812 dDocent_Contig_11460 98 . N T 222.936 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=10;CIGAR=1X;DP=10;DPB=10;DPRA=0;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=11.5366;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=245;QR=0;RO=0;RPL=10;RPP=24.725;RPPR=0;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:10:0,10:0:0:10:245:-22.2936,-3.0103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_11461 17 . A G 15792.2 . AB=0.767477;ABP=411.907;AC=2;AF=0.166667;AN=12;AO=505;CIGAR=1X;DP=1174;DPB=1174;DPRA=2.55039;EPP=1099.6;EPPR=1317.91;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.761976;PAO=0;PQA=0;PQR=0;PRO=0;QA=19796;QR=26488;RO=668;RPL=0;RPP=1099.6;RPPR=1453.55;RPR=505;RUN=1;SAF=505;SAP=1099.6;SAR=0;SRF=652;SRP=1317.91;SRR=16;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:88:88,0:88:3474:0:0:0,-26.4906,-312.717 0/0:129:129,0:129:5118:0:0:0,-38.8329,-460.505 0/0:113:113,0:113:4477:0:0:0,-34.0164,-402.876 0/0:186:185,0:185:7365:0:0:0,-55.6905,-662.393 0/1:379:84,295:84:3341:295:11561:-925.691,0,-186.662 0/1:279:69,210:69:2713:210:8235:-656.755,0,-160.321 dDocent_Contig_11462 19 . T C 5981.65 . AB=0.452954;ABP=11.796;AC=2;AF=0.166667;AN=12;AO=211;CIGAR=1X;DP=888;DPB=888;DPRA=2.28889;EPP=461.191;EPPR=1473.1;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997046;PAO=0;PQA=0;PQR=0;PRO=0;QA=8370;QR=27031;RO=677;RPL=0;RPP=461.191;RPPR=1473.1;RPR=211;RUN=1;SAF=211;SAP=461.191;SAR=0;SRF=677;SRP=1473.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:51:51,0:51:2038:0:0:0,-15.3525,-183.604 0/0:95:95,0:95:3794:0:0:0,-28.5978,-341.466 0/0:161:157,4:157:6295:4:159:0,-33.775,-551.588 0/0:124:124,0:124:4967:0:0:0,-37.3277,-446.903 0/1:240:101,139:101:3989:139:5511:-423.586,0,-286.761 0/1:217:149,68:149:5948:68:2700:-177.801,0,-469.779 dDocent_Contig_11463 40 . C G 674.025 . AB=0.0849673;ABP=231.923;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=4M1X1M3D2X11M;DP=211;DPB=190.591;DPRA=0;EPP=33.4109;EPPR=121.854;GTI=0;LEN=1;MEANALT=3.4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.743243;PAO=0;PQA=0;PQR=0;PRO=0;QA=527;QR=5594;RO=148;RPL=0;RPP=33.4109;RPPR=121.854;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=148;SRP=324.388;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:22:14,0,6:14:508:0,6:0,210:-12.9095,-17.1239,-58.6167,0,-41.533,-39.7269 0|0:55:47,1,6:47:1768:1,6:39,206:-2.65467,-13.5869,-158.198,0,-141.777,-143.177 0|0:53:41,4,5:41:1565:4,5:154,186:-2.88902,-2.57543,-129.794,0,-115.774,-126.914 0|0:36:31,1,3:31:1188:1,3:32,98:0,-6.74807,-104.026,-1.37551,-96.418,-98.0915 1|0:11:0,3,7:0:0:3,7:108,237:-28.2577,-19.4328,-18.5297,-9.0129,0,-6.90569 0|0:34:15,5,13:15:565:5,13:194,426:-29.8886,-18.4448,-63.2693,0,-30.3779,-42.4105 dDocent_Contig_11465 47 . C T 141.669 . AB=0.150685;ABP=80.3802;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=5M1D1X;DP=222;DPB=216.571;DPRA=1.17413;EPP=33.4109;EPPR=435.133;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=0.357143;PAIREDR=0.366834;PAO=0;PQA=0;PQR=0;PRO=0;QA=529;QR=7771;RO=199;RPL=0;RPP=33.4109;RPPR=435.133;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=199;SRP=435.133;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:26:20,6,0:20:774:6,0:228,0:-13.0569,0,-62.1542,-19.0775,-63.9604,-82.6566 0|1:47:42,5,0:42:1650:5,0:189,0:-3.22668,0,-134.599,-15.8699,-136.104,-151.595 0|0:19:19,0,0:19:736:0,0:0,0:0,-5.71957,-66.5664,-5.71957,-66.5664,-66.5664 0|0:45:41,3,0:41:1594:3,0:112,0:0,-2.95259,-133.336,-12.3422,-134.239,-143.408 0|0:48:44,0,2:44:1727:0,2:0,62:0,-13.2453,-155.459,-8.15745,-150.489,-149.887 0|0:37:33,0,4:33:1290:0,4:0,154:-3.09518,-13.0292,-119.088,0,-106.444,-105.24 dDocent_Contig_11466 32 . A G 38.2908 . AB=0.15;ABP=24.2907;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=157;DPB=157;DPRA=1.04854;EPP=11.6962;EPPR=335.246;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.836601;PAO=0;PQA=0;PQR=0;PRO=0;QA=163;QR=6089;RO=153;RPL=0;RPP=11.6962;RPPR=335.246;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=153;SRP=335.246;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:796:0:0:0,-6.0206,-71.9582 0/0:46:46,0:46:1834:0:0:0,-13.8474,-165.267 0/0:9:9,0:9:367:0:0:0,-2.70927,-33.3953 0/0:28:28,0:28:1103:0:0:0,-8.42884,-99.5591 0/1:20:17,3:17:685:3:122:-5.35189,0,-55.9588 0/0:34:33,1:33:1304:1:41:0,-6.14045,-113.525 dDocent_Contig_11467 24 . G A 829.939 . AB=0.117647;ABP=24.5973;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=1X1M4D1M1X;DP=637;DPB=636;DPRA=0.132812;EPP=7.35324;EPPR=1242.92;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=79;QR=21863;RO=571;RPL=0;RPP=7.35324;RPPR=1242.92;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=571;SRP=1242.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:186:179,0,7:179:6868:0,7:0,280:0,-53.8844,-617.562,-30.42,-594.497,-592.39 0|0:174:160,0,13:160:6144:0,13:0,521:0,-48.1648,-552.47,-5.25116,-509.547,-505.634 0|0:149:140,0,8:140:5351:0,8:0,327:0,-42.1442,-481.151,-15.1529,-454.166,-451.758 0|0:108:92,0,14:92:3500:0,14:0,565:-18.9519,-46.6467,-333.67,0,-287.093,-282.879 0|0:3:0,0,3:0:0:0,3:0,121:-11.2802,-11.2802,-11.2802,-0.90309,-0.90309,0 1|0:17:0,2,15:0:0:2,15:79,596:-55.9543,-49.4537,-48.8516,-6.89557,0,-2.38012 dDocent_Contig_11468 16 . G A 795.643 . AB=0.115152;ABP=1064.33;AC=3;AF=0.25;AN=12;AO=102;CIGAR=1X;DP=1394;DPB=1394;DPRA=2.08525;EPP=224.5;EPPR=2806.38;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3959;QR=50367;RO=1291;RPL=0;RPP=224.5;RPPR=2806.38;RPR=102;RUN=1;SAF=102;SAP=224.5;SAR=0;SRF=1291;SRP=2806.38;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:122:122,0:122:4854:0:0:0,-36.7257,-436.769 0/0:228:227,1:227:8869:1:39:0,-64.7383,-793.861 0/0:219:213,6:213:8313:6:230:0,-44.8626,-726.688 0/1:158:141,17:141:5499:17:663:-12.4392,0,-447.197 0/1:261:229,32:229:8903:32:1252:-34.3911,0,-722.238 0/1:406:359,46:359:13929:46:1775:-37.9559,0,-1130.65 dDocent_Contig_11469 1 . N G 86.5986 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=43;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=94;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:94:-8.65932,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11470 39 . C G 320.323 . AB=0.342857;ABP=10.5174;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=166;DPB=166;DPRA=1.33588;EPP=29.068;EPPR=337.417;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=486;QR=6172;RO=154;RPL=0;RPP=29.068;RPPR=337.417;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=154;SRP=337.417;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:1172:0:0:0,-8.72987,-105.757 0/0:39:39,0:39:1549:0:0:0,-11.7402,-139.645 0/0:17:17,0:17:688:0:0:0,-5.11751,-62.2499 0/1:35:23,12:23:924:12:486:-33.5552,0,-72.9278 0/0:30:30,0:30:1212:0:0:0,-9.0309,-109.351 0/0:16:16,0:16:627:0:0:0,-4.81648,-56.7652 dDocent_Contig_11471 11 . T C 10715.6 . AB=0.0176899;ABP=1944.75;AC=6;AF=0.5;AN=12;AO=17;CIGAR=4M1X4M2X1M1X;DP=1601;DPB=1602.69;DPRA=0;EPP=39.9253;EPPR=1027.95;GTI=0;LEN=1;MEANALT=20.75;MQM=39.1176;MQMR=59.7458;NS=6;NUMALT=5;ODDS=0;PAIRED=0;PAIREDR=0.0699153;PAO=0;PQA=0;PQR=0;PRO=0;QA=639;QR=17548;RO=472;RPL=0;RPP=39.9253;RPPR=1027.95;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=472;SRP=1027.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:224:67,2,62,0,57,2:67:2481:2,62,0,57,2:77,1560,0,2024,75:-142.593,-156.438,-358.724,-51.2178,-247.777,-235.436,-162.762,-359.327,-254.1,-365.65,0,-196.587,-91.3695,-202.91,-185.752,-157.113,-353.678,-248.451,-360.001,-197.261,-359.399 0|1:454:141,39,98,0,126,0:141:5279:39,98,0,126,0:1428,2965,0,4569,0:-324.22,-255.076,-675.617,-144.851,-465.542,-547.626,-366.666,-687.357,-577.127,-798.943,0,-320.706,-210.483,-432.294,-394.364,-366.666,-687.357,-577.127,-798.943,-432.294,-798.943 0|1:215:75,7,37,0,55,11:75:2768:7,37,0,55,11:245,975,0,2054,417:-143.178,-147.128,-371.415,-95.8243,-303.584,-311.071,-165.755,-373.522,-322.209,-392.148,0,-207.787,-156.48,-226.414,-209.857,-133.649,-341.417,-290.106,-360.044,-194.308,-356.732 0|1:342:88,21,66,1,107,2:88:3271:21,66,1,107,2:777,1641,35,3893,71:-286.053,-250.725,-512.074,-198.473,-404.321,-446.268,-309.696,-515.548,-463.288,-577.063,0,-205.869,-153.622,-264.84,-235.478,-307.297,-513.149,-460.89,-572.118,-262.442,-574.364 0|1:186:40,42,37,11,32,0:40:1481:42,37,11,32,0:1544,727,425,1182,0:-111.677,0,-108.537,-76.5301,-73.9937,-186.553,-89.6587,-87.1209,-163.636,-207.519,-29.8029,-27.2653,-103.79,-116.921,-141.346,-123.718,-121.18,-197.691,-210.83,-150.979,-244.887 0|1:180:61,7,39,3,32,2:61:2268:7,39,3,32,2:254,498,109,1163,76:-75.0577,-73.3309,-256.782,-69.9597,-235.408,-243.752,-84.6524,-250.122,-246.726,-269.305,0,-165.491,-162.106,-176.811,-175.945,-87.7228,-253.192,-249.796,-264.511,-179.881,-272.676 dDocent_Contig_11472 11 . C T 9135.93 . AB=0.171875;ABP=62.8615;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X3M1X1M1X;DP=377;DPB=377;DPRA=0.205882;EPP=29.068;EPPR=207.129;GTI=0;LEN=1;MEANALT=1.66667;MQM=58.1667;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.666667;PAIREDR=0.861702;PAO=0;PQA=0;PQR=0;PRO=0;QA=467;QR=3389;RO=94;RPL=0;RPP=29.068;RPPR=207.129;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=94;SRP=207.129;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:20:18,1,0,1:18:668:1,0,1:38,0,11:0,-2.16716,-56.7744,-5.41854,-57.0754,-60.1931,-4.86444,-56.4002,-59.5172,-59.2162 0|1:17:13,4,0,0:13:448:4,0,0:157,0,0:-9.06714,0,-35.5256,-12.9805,-36.7297,-49.336,-12.9805,-36.7297,-49.336,-49.336 0|1:47:37,7,0,3:37:1308:7,0,3:272,0,33:-11.4067,0,-104.629,-22.5448,-106.737,-129.095,-20.5614,-104.688,-127.044,-126.141 0|0:23:22,0,0,1:22:817:0,0,1:0,0,25:0,-6.62266,-73.5949,-6.62266,-73.5949,-73.5949,-4.42383,-71.6513,-71.6513,-71.3503 0|0:249:2,0,246,0:2:70:0,246,0:0,9396,0:-838.786,-839.388,-845.082,-68.1992,-74.0534,0,-839.388,-845.082,-74.0534,-845.082 0|0:21:2,0,19,0:2:78:0,19,0:0,718,0:-58.6283,-59.2304,-65.6433,0,-6.80141,-1.08184,-59.2304,-65.6433,-6.80141,-65.6433 dDocent_Contig_11473 33 . A G 3557.37 . AB=0.441379;ABP=11.6662;AC=6;AF=0.5;AN=12;AO=128;CIGAR=1X;DP=290;DPB=290;DPRA=0;EPP=280.959;EPPR=352.617;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.820312;PAIREDR=0.850932;PAO=0;PQA=0;PQR=0;PRO=0;QA=5026;QR=6286;RO=161;RPL=0;RPP=280.959;RPPR=352.617;RPR=128;RUN=1;SAF=128;SAP=280.959;SAR=0;SRF=161;SRP=352.617;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:39:28,11:28:1097:11:441:-28.3048,0,-87.274 0/1:61:29,32:29:1155:32:1243:-93.7759,0,-85.8646 0/1:50:28,21:28:1096:21:816:-58.7673,0,-83.933 0/1:46:33,13:33:1250:13:524:-33.6595,0,-98.9226 0/1:39:26,13:26:1035:13:476:-31.426,0,-81.7036 0/1:55:17,38:17:653:38:1526:-121.026,0,-42.5405 dDocent_Contig_11474 110 . A G 2425.21 . AB=0.266667;ABP=81.0385;AC=6;AF=0.5;AN=12;AO=114;CIGAR=1X;DP=332;DPB=332;DPRA=0;EPP=250.558;EPPR=474.22;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3428;QR=5557;RO=217;RPL=0;RPP=250.558;RPPR=474.22;RPR=114;RUN=1;SAF=0;SAP=250.558;SAR=114;SRF=0;SRP=474.22;SRR=217;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:56:51,5:51:1310:5:148:0,-3.24459,-104.527 0/1:126:88,38:88:2229:38:1131:-64.1316,0,-162.904 0/0:46:44,1:44:1178:1:5:0,-13.0964,-105.769 0/1:39:33,6:33:835:6:196:-6.22158,0,-63.6525 1/1:16:0,16:0:0:16:504:-45.6631,-4.81648,0 1/1:49:1,48:1:5:48:1444:-129.727,-14.2505,0 dDocent_Contig_11475 17 . C T 81.2629 . AB=0.172414;ABP=30.0414;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=129;DPB=129;DPRA=1.26582;EPP=16.0391;EPPR=270.101;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.333333;PAIREDR=0.487805;PAO=0;PQA=0;PQR=0;PRO=0;QA=241;QR=4869;RO=123;RPL=0;RPP=16.0391;RPPR=270.101;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=123;SRP=270.101;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:562:0:0:0,-4.21442,-50.9227 0/1:29:24,5:24:930:5:200:-9.64916,0,-75.2665 0/0:21:20,1:20:798:1:41:0,-2.22706,-68.0434 0/0:20:20,0:20:795:0:0:0,-6.0206,-71.868 0/0:20:20,0:20:780:0:0:0,-6.0206,-70.5081 0/0:25:25,0:25:1004:0:0:0,-7.52575,-90.6574 dDocent_Contig_11476 21 . T A 104.935 . AB=0.0373134;ABP=252.179;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=6M1X2M;DP=267;DPB=265.111;DPRA=2.37975;EPP=18.2106;EPPR=526.335;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=284;QR=9454;RO=241;RPL=0;RPP=18.2106;RPPR=526.335;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=241;SRP=526.335;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:12:12,0,0:12:477:0,0:0,0:0,-3.61236,-43.2826,-3.61236,-43.2826,-43.2826 0|0:43:39,3,0:39:1527:3,0:119,0:0,-1.71532,-126.658,-11.7402,-127.562,-137.358 0|0:93:81,11,1:81:3192:11,1:427,41:-10.673,0,-259.28,-31.6705,-259.207,-293.982 0|0:24:23,1,0:23:893:1,0:41,0:0,-3.13015,-76.5908,-6.92369,-76.8919,-80.2768 0|0:54:52,0,2:52:2034:0,2:0,82:0,-15.6536,-182.867,-8.47594,-176.098,-175.496 0|1:41:34,2,4:34:1331:2,4:79,161:-3.03573,-6.77271,-115.598,0,-102.93,-108.226 dDocent_Contig_11477 22 . G C 920.927 . AB=0.25641;ABP=83.4105;AC=5;AF=0.416667;AN=12;AO=40;CIGAR=1X;DP=177;DPB=177;DPRA=1.48571;EPP=89.8692;EPPR=300.502;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1627;QR=5428;RO=137;RPL=0;RPP=89.8692;RPPR=300.502;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=137;SRP=300.502;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:23,8:23:927:8:320:-19.8334,0,-74.4017 0/1:29:22,7:22:874:7:286:-17.3849,0,-70.2407 0/0:21:21,0:21:846:0:0:0,-6.32163,-76.4523 0/1:40:32,8:32:1242:8:326:-17.6685,0,-100.005 0/1:26:17,9:17:670:9:368:-25.6586,0,-52.8042 0/1:30:22,8:22:869:8:327:-20.7692,0,-69.4793 dDocent_Contig_11478 27 . C A 70.013 . AB=0.123288;ABP=92.9925;AC=3;AF=0.25;AN=12;AO=11;CIGAR=1X;DP=153;DPB=153;DPRA=1.32143;EPP=26.8965;EPPR=311.359;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.181818;PAIREDR=0.619718;PAO=0;PQA=0;PQR=0;PRO=0;QA=444;QR=5671;RO=142;RPL=0;RPP=26.8965;RPPR=311.359;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=142;SRP=311.359;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:18,2:18:700:2:80:-1.57098,0,-57.2964 0/0:29:29,0:29:1163:0:0:0,-8.72987,-104.948 0/0:13:13,0:13:529:0:0:0,-3.91339,-47.9569 0/1:33:29,4:29:1150:4:164:-5.21591,0,-93.8444 0/1:20:17,3:17:677:3:118:-4.98098,0,-55.2373 0/0:38:36,2:36:1452:2:82:0,-3.65946,-123.148 dDocent_Contig_11480 46 . G C 62.3247 . AB=0.110092;ABP=146.945;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=641;DPB=641;DPRA=0.976959;EPP=35.5824;EPPR=1360.18;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.9936;PAO=0;PQA=0;PQR=0;PRO=0;QA=564;QR=24261;RO=625;RPL=0;RPP=35.5824;RPPR=1360.18;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=625;SRP=1360.18;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:99:99,0:99:3848:0:0:0,-29.802,-346.368 0/0:118:118,0:118:4597:0:0:0,-35.5215,-413.701 0/0:107:106,1:106:4164:1:41:0,-28.1156,-370.654 0/0:106:104,1:104:4056:1:39:0,-27.9664,-361.297 0/1:109:97,12:97:3721:12:447:-7.75535,0,-302.145 0/0:102:101,1:101:3875:1:37:0,-27.0072,-345.085 dDocent_Contig_11481 11 . G T 82.8921 . AB=0.142857;ABP=72.8076;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=166;DPB=166;DPRA=1.59375;EPP=29.068;EPPR=337.417;GTI=0;LEN=1;MEANALT=1;MQM=53.8333;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0;PAIREDR=0.987013;PAO=0;PQA=0;PQR=0;PRO=0;QA=442;QR=5980;RO=154;RPL=0;RPP=29.068;RPPR=337.417;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=154;SRP=337.417;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:11:11,0:11:445:0:0:0,-3.31133,-40.4061 0/0:39:36,3:36:1372:3:111:0,-1.56981,-113.567 0/0:32:32,0:32:1232:0:0:0,-9.63296,-111.151 0/1:39:35,4:35:1384:4:146:-1.58154,0,-113.085 0/1:24:19,5:19:753:5:185:-9.78529,0,-60.8694 0/0:21:21,0:21:794:0:0:0,-6.32163,-71.7669 dDocent_Contig_11482 125 . G A 457.467 . AB=0.358209;ABP=14.7103;AC=1;AF=0.125;AN=8;AO=24;CIGAR=1X;DP=240;DPB=240;DPRA=1.16185;EPP=55.1256;EPPR=467.705;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=748;QR=7122;RO=214;RPL=0;RPP=55.1256;RPPR=467.705;RPR=24;RUN=1;SAF=0;SAP=55.1256;SAR=24;SRF=0;SRP=467.705;SRR=214;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:40,0:40:1365:0:0:0,-12.0412,-123.147 0/0:90:88,0:88:2850:0:0:0,-26.4906,-256.536 0/0:43:43,0:43:1442:0:0:0,-12.9443,-130.072 0/1:67:43,24:43:1465:24:748:-47.4457,0,-111.974 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11483 7 . G A 972.265 . AB=0.158291;ABP=406.664;AC=3;AF=0.25;AN=12;AO=63;CIGAR=1X;DP=954;DPB=954;DPRA=0.715827;EPP=139.813;EPPR=1881.33;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2430;QR=27594;RO=865;RPL=0;RPP=139.813;RPPR=1881.33;RPR=63;RUN=1;SAF=63;SAP=139.813;SAR=0;SRF=865;SRP=1881.33;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:85:85,0:85:2737:0:0:0,-25.5875,-246.518 0/1:96:83,10:83:2544:10:388:-7.10815,0,-201.04 0/1:100:89,9:89:2891:9:348:-1.96184,0,-230.691 0/1:202:153,44:153:5007:44:1694:-93.2785,0,-391.297 0/0:270:262,0:262:8197:0:0:0,-78.8699,-737.536 0/0:201:193,0:193:6218:0:0:0,-58.0988,-559.505 dDocent_Contig_11484 24 . G A 18958.4 . AB=0.362043;ABP=219.899;AC=8;AF=0.666667;AN=12;AO=687;CIGAR=1X;DP=1529;DPB=1529;DPRA=0;EPP=189.653;EPPR=1659.63;GTI=0;LEN=1;MEANALT=1.16667;MQM=58.6943;MQMR=59.4007;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.590975;PAIREDR=0.970273;PAO=0;PQA=0;PQR=0;PRO=0;QA=25936;QR=33328;RO=841;RPL=0;RPP=1494.81;RPPR=1829.22;RPR=687;RUN=1;SAF=465;SAP=189.653;SAR=222;SRF=821;SRP=1659.63;SRR=20;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:352:223,129:223:8893:129:5110:-344.668,0,-688.042 0/1:427:299,127:299:11808:127:4956:-315.703,0,-931.374 0/1:172:93,79:93:3663:79:2953:-213.638,0,-266.659 0/1:361:221,140:221:8769:140:5320:-369.983,0,-674.111 1/1:98:1,97:1:41:97:3390:-301.131,-25.4064,0 1/1:119:4,115:4:154:115:4207:-357.938,-21.5908,0 dDocent_Contig_11485 62 . G A 1956.38 . AB=0.554622;ABP=6.09416;AC=5;AF=0.416667;AN=12;AO=66;CIGAR=1X;DP=142;DPB=142;DPRA=1.03478;EPP=146.327;EPPR=168.042;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.984848;PAIREDR=0.973684;PAO=0;PQA=0;PQR=0;PRO=0;QA=2655;QR=3026;RO=76;RPL=66;RPP=146.327;RPPR=168.042;RPR=0;RUN=1;SAF=66;SAP=146.327;SAR=0;SRF=76;SRP=168.042;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:910:0:0:0,-6.92369,-82.2067 0/1:23:16,7:16:626:7:282:-18.8289,0,-49.7554 0/1:17:12,5:12:483:5:201:-13.3534,0,-38.7041 0/1:30:16,14:16:648:14:563:-41.9815,0,-49.6217 0/1:19:5,14:5:199:14:570:-45.9226,0,-12.5694 0/1:30:4,26:4:160:26:1039:-84.7731,0,-5.75269 dDocent_Contig_11486 7 . G A 432.207 . AB=0.296875;ABP=25.9465;AC=3;AF=0.25;AN=12;AO=19;CIGAR=1X;DP=103;DPB=103;DPRA=1.64103;EPP=44.2683;EPPR=181.071;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=740;QR=2556;RO=82;RPL=0;RPP=44.2683;RPPR=181.071;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=82;SRP=181.071;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:9:6,3:6:158:3:117:-8.20111,0,-11.7677 0/1:26:22,4:22:730:4:155:-6.49866,0,-58.1703 0/1:29:17,12:17:480:12:468:-33.7427,0,-34.7329 0/0:29:27,0:27:850:0:0:0,-8.12781,-76.6562 0/0:6:6,0:6:203:0:0:0,-1.80618,-18.6003 0/0:4:4,0:4:135:0:0:0,-1.20412,-12.4802 dDocent_Contig_11487 79 . T C 173.819 . AB=0.27027;ABP=19.9713;AC=2;AF=0.2;AN=10;AO=11;CIGAR=1X;DP=65;DPB=65;DPRA=2.04167;EPP=26.8965;EPPR=120.27;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=381;QR=1833;RO=54;RPL=11;RPP=26.8965;RPPR=120.27;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=54;SRP=120.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:11,1:11:369:1:35:0,-0.113731,-30.0362 0/1:22:17,5:17:587:5:171:-9.10379,0,-46.5333 0/0:14:14,0:14:484:0:0:0,-4.21442,-43.8897 0/1:15:10,5:10:331:5:175:-11.5782,0,-25.595 ./.:.:.:.:.:.:.:. 0/0:2:2,0:2:62:0:0:0,-0.60206,-5.88849 dDocent_Contig_11489 23 . G A 180.895 . AB=0.333333;ABP=8.07707;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=377;DPB=377;DPRA=0.294944;EPP=18.2106;EPPR=806.455;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994595;PAO=0;PQA=0;PQR=0;PRO=0;QA=284;QR=14772;RO=370;RPL=0;RPP=18.2106;RPPR=806.455;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=370;SRP=806.455;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:71:71,0:71:2862:0:0:0,-21.3731,-257.678 0/0:89:89,0:89:3516:0:0:0,-26.7917,-316.477 0/0:98:98,0:98:3919:0:0:0,-29.5009,-352.698 0/0:85:85,0:85:3407:0:0:0,-25.5875,-306.674 0/0:13:13,0:13:523:0:0:0,-3.91339,-47.4142 0/1:21:14,7:14:545:7:284:-19.6124,0,-43.0619 dDocent_Contig_11490 19 . G A 2348.47 . AB=0.309446;ABP=99.8353;AC=4;AF=0.333333;AN=12;AO=105;CIGAR=1X;DP=461;DPB=461;DPRA=0;EPP=231.015;EPPR=776.054;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.971429;PAIREDR=0.884831;PAO=0;PQA=0;PQR=0;PRO=0;QA=4081;QR=14158;RO=356;RPL=0;RPP=231.015;RPPR=776.054;RPR=105;RUN=1;SAF=105;SAP=231.015;SAR=0;SRF=356;SRP=776.054;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:83:76,7:76:2985:7:266:0,-0.691905,-244.45 0/0:71:68,3:68:2687:3:112:0,-10.9303,-231.497 0/1:54:48,6:48:1931:6:242:-5.90133,0,-157.73 0/1:95:79,16:79:3173:16:616:-27.1714,0,-257.036 0/1:72:39,33:39:1567:33:1264:-92.3532,0,-119.588 0/1:86:46,40:46:1815:40:1581:-116.642,0,-137.671 dDocent_Contig_11491 71 . T A 106.453 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=4;CIGAR=1X;DP=75;DPB=75;DPRA=1.125;EPP=5.18177;EPPR=157.185;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=8.67362e-19;PAIRED=0.75;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=146;QR=2570;RO=71;RPL=4;RPP=11.6962;RPPR=157.185;RPR=0;RUN=1;SAF=3;SAP=5.18177;SAR=1;SRF=71;SRP=157.185;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:506:0:0:0,-4.21442,-45.8778 0/0:22:22,0:22:791:0:0:0,-6.62266,-71.5111 0/0:9:9,0:9:323:0:0:0,-2.70927,-29.4141 0/0:24:23,1:23:839:1:37:0,-3.52689,-72.1333 1/1:3:0,3:0:0:3:109:-10.168,-0.90309,0 0/0:3:3,0:3:111:0:0:0,-0.90309,-10.3539 dDocent_Contig_11492 27 . T A 30.5565 . AB=0.101695;ABP=84.3117;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=217;DPB=217;DPRA=1.86709;EPP=16.0391;EPPR=461.191;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.981043;PAO=0;PQA=0;PQR=0;PRO=0;QA=244;QR=8056;RO=211;RPL=0;RPP=16.0391;RPPR=461.191;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=211;SRP=461.191;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:52:52,0:52:1986:0:0:0,-15.6536,-178.958 0/0:49:49,0:49:1886:0:0:0,-14.7505,-169.972 0/0:45:45,0:45:1687:0:0:0,-13.5463,-152.068 0/1:59:53,6:53:2029:6:244:-4.57806,0,-165.071 0/0:3:3,0:3:119:0:0:0,-0.90309,-11.0954 0/0:9:9,0:9:349:0:0:0,-2.70927,-31.7699 dDocent_Contig_11493 18 . T C 916.164 . AB=0.139485;ABP=529.084;AC=4;AF=0.333333;AN=12;AO=76;CIGAR=1X;DP=702;DPB=702;DPRA=1.41379;EPP=168.042;EPPR=1355.84;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.947368;PAIREDR=0.942215;PAO=0;PQA=0;PQR=0;PRO=0;QA=3060;QR=24959;RO=623;RPL=0;RPP=168.042;RPPR=1355.84;RPR=76;RUN=1;SAF=76;SAP=168.042;SAR=0;SRF=623;SRP=1355.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:149:138,11:138:5522:11:447:0,-4.2676,-456.217 0/1:123:112,11:112:4485:11:442:-3.10882,0,-366.552 0/1:141:128,13:128:5148:13:528:-5.42166,0,-420.735 0/1:124:111,10:111:4420:10:404:-0.045864,0,-361.116 0/0:87:87,0:87:3499:0:0:0,-26.1896,-314.944 0/1:78:47,31:47:1885:31:1239:-88.3013,0,-146.369 dDocent_Contig_11494 29 . T C 10056.2 . AB=0.685897;ABP=143.488;AC=6;AF=0.5;AN=12;AO=321;CIGAR=1X;DP=468;DPB=468;DPRA=0;EPP=700.053;EPPR=322.217;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.984424;PAIREDR=0.959184;PAO=0;PQA=0;PQR=0;PRO=0;QA=12852;QR=5901;RO=147;RPL=0;RPP=700.053;RPPR=322.217;RPR=321;RUN=1;SAF=321;SAP=700.053;SAR=0;SRF=147;SRP=322.217;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:46:32,14:32:1288:14:551:-36.0844,0,-102.334 0/1:36:11,25:11:445:25:1020:-81.2532,0,-29.5681 0/1:82:9,73:9:362:73:2904:-236.761,0,-8.25862 0/1:64:32,32:32:1292:32:1287:-96.8306,0,-97.2773 0/1:102:20,82:20:798:82:3275:-264.103,0,-41.4295 0/1:138:43,95:43:1716:95:3815:-301.806,0,-113.118 dDocent_Contig_11495 134 . G A 87.9369 . AB=0.8;ABP=6.91895;AC=1;AF=0.1;AN=10;AO=5;CIGAR=1X;DP=138;DPB=138;DPRA=0.315789;EPP=13.8677;EPPR=289.645;GTI=0;LEN=1;MEANALT=1;MQM=49.2;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=176;QR=4466;RO=132;RPL=0;RPP=13.8677;RPPR=289.645;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=289.645;SRR=132;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:18,1:18:613:1:35:0,-2.27105,-52.043 0/0:81:80,0:80:2689:0:0:0,-24.0824,-241.91 0/0:13:13,0:13:455:0:0:0,-3.91339,-41.2838 0/0:20:20,0:20:674:0:0:0,-6.0206,-60.9762 ./.:.:.:.:.:.:.:. 0/1:5:1,4:1:35:4:141:-10.3111,0,-1.99348 dDocent_Contig_11496 22 . G A 210.094 . AB=0.636364;ABP=4.78696;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=234;DPB=234;DPRA=0.246637;EPP=18.2106;EPPR=495.935;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.84141;PAO=0;PQA=0;PQR=0;PRO=0;QA=283;QR=9019;RO=227;RPL=0;RPP=18.2106;RPPR=495.935;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=227;SRP=495.935;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:67:67,0:67:2676:0:0:0,-20.169,-240.962 0/0:41:41,0:41:1645:0:0:0,-12.3422,-148.28 0/0:24:24,0:24:956:0:0:0,-7.22472,-86.3423 0/0:86:86,0:86:3398:0:0:0,-25.8886,-305.875 0/0:5:5,0:5:195:0:0:0,-1.50515,-17.9233 0/1:11:4,7:4:149:7:283:-22.5323,0,-10.4606 dDocent_Contig_11497 15 . A G 616.023 . AB=0.18254;ABP=113.307;AC=5;AF=0.416667;AN=12;AO=25;CIGAR=1M1X25M;DP=171;DPB=165.111;DPRA=0;EPP=57.2971;EPPR=222.329;GTI=0;LEN=1;MEANALT=4.2;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=0.32;PAIREDR=0.554455;PAO=0;PQA=0;PQR=0;PRO=0;QA=997;QR=3899;RO=101;RPL=0;RPP=57.2971;RPPR=222.329;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=101;SRP=222.329;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:13:2,3,2,0,0,4:2:76:3,2,0,0,4:106,70,0,0,148:-13.91,-5.87734,-11.215,-8.8168,-6.42366,-14.4543,-14.5121,-12.1181,-15.0564,-20.7503,-14.5121,-12.1181,-15.0564,-20.7503,-20.7503,-2.39375,0,-2.94114,-8.63797,-8.63797,-7.43385 0|1:32:21,0,0,3,0,7:21:795:0,0,3,0,7:0,0,117,0,282:-16.9263,-23.2479,-88.4066,-23.2479,-88.4066,-88.4066,-13.6342,-78.7887,-78.7887,-77.8856,-23.2479,-88.4066,-88.4066,-78.7887,-88.4066,0,-65.1589,-65.1589,-55.5402,-65.1589,-63.0517 0|0:29:25,0,0,0,0,2:25:969:0,0,0,0,2:0,0,0,0,79:0,-7.52575,-87.1281,-7.52575,-87.1281,-87.1281,-7.52575,-87.1281,-87.1281,-87.1281,-7.52575,-87.1281,-87.1281,-87.1281,-87.1281,-1.02231,-80.6266,-80.6266,-80.6266,-80.6266,-80.0246 0|1:34:18,8,0,0,0,4:18:684:8,0,0,0,4:278,0,0,0,162:-17.1824,0,-53.7097,-22.6009,-56.118,-78.7109,-22.6009,-56.118,-78.7109,-78.7109,-22.6009,-56.118,-78.7109,-78.7109,-78.7109,-9.22248,-42.753,-65.347,-65.347,-65.347,-64.1429 0|0:16:10,2,0,1,2,0:10:388:2,0,1,2,0:70,0,38,78,0:-3.40792,-0.73608,-32.0109,-6.41822,-32.613,-38.3036,-3.30104,-29.4971,-35.1873,-34.8863,0,-26.2012,-31.8911,-28.7748,-31.2891,-6.41822,-32.613,-38.3036,-35.1873,-31.8911,-38.3036 0|1:47:25,3,3,1,5,8:25:987:3,3,1,5,8:111,112,37,189,326:-19.3811,-17.8284,-98.146,-17.7412,-89.8829,-98.0591,-23.8806,-96.0226,-95.9357,-104.801,-11.419,-83.5608,-83.4738,-89.6135,-91.1349,0,-72.1511,-72.0641,-78.204,-65.7418,-78.8224 dDocent_Contig_11498 109 . C A 49.6367 . AB=0.16129;ABP=33.9012;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=287;DPB=287;DPRA=0.928571;EPP=18.2106;EPPR=608.851;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=59.9964;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.967742;PAO=0;PQA=0;PQR=0;PRO=0;QA=242;QR=9492;RO=279;RPL=0;RPP=18.2106;RPPR=608.851;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=608.851;SRR=279;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:42:42,0:42:1446:0:0:0,-12.6433,-130.437 0/0:66:66,0:66:2221:0:0:0,-19.868,-200.156 0/1:31:26,5:26:879:5:172:-6.48654,0,-70.0888 0/0:59:59,0:59:2027:0:0:0,-17.7608,-182.708 0/0:60:57,2:57:1978:2:70:0,-11.2767,-171.741 0/0:29:29,0:29:941:0:0:0,-8.72987,-84.9835 dDocent_Contig_11499 42 . A G 747.715 . AB=0.212121;ABP=26.7649;AC=4;AF=0.333333;AN=12;AO=25;CIGAR=1X;DP=85;DPB=85;DPRA=1.5;EPP=57.2971;EPPR=133.299;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=965;QR=2373;RO=60;RPL=0;RPP=57.2971;RPPR=133.299;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=60;SRP=133.299;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:4:4,0:4:163:0:0:0,-1.20412,-15.0584 0/0:15:15,0:15:596:0:0:0,-4.51545,-53.9781 0/0:15:15,0:15:605:0:0:0,-4.51545,-54.7887 0/1:21:16,5:16:648:5:184:-10.5904,0,-52.3322 1/1:18:0,18:0:0:18:699:-63.2351,-5.41854,0 0/1:12:10,2:10:361:2:82:-4.16732,0,-29.2058 dDocent_Contig_11500 11 . T C 306.8 . AB=0.434783;ABP=3.86001;AC=4;AF=0.333333;AN=12;AO=12;CIGAR=1X;DP=53;DPB=53;DPRA=0.892857;EPP=29.068;EPPR=92.0407;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.829268;PAO=0;PQA=0;PQR=0;PRO=0;QA=427;QR=1592;RO=41;RPL=0;RPP=29.068;RPPR=92.0407;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=41;SRP=92.0407;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:8:8,0:8:312:0:0:0,-2.40824,-28.4415 0/1:11:10,1:10:364:1:40:-0.684349,0,-29.7833 0/0:10:10,0:10:393:0:0:0,-3.0103,-35.7249 0/0:10:10,0:10:403:0:0:0,-3.0103,-36.6299 1/1:2:0,2:0:0:2:73:-6.92919,-0.60206,0 0/1:12:3,9:3:120:9:314:-24.9689,0,-7.57495 dDocent_Contig_11501 28 . T A 582.688 . AB=0.366667;ABP=12.2752;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X;DP=242;DPB=242;DPRA=0.659341;EPP=50.7827;EPPR=478.563;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=876;QR=8612;RO=219;RPL=0;RPP=50.7827;RPPR=478.563;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=219;SRP=478.563;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:60:60,0:60:2366:0:0:0,-18.0618,-213.102 0/1:27:10,17:10:396:17:674:-52.8627,0,-27.8707 0/1:33:28,5:28:1090:5:202:-8.62788,0,-88.4584 0/0:86:85,0:85:3353:0:0:0,-25.5875,-301.508 0/0:22:22,0:22:867:0:0:0,-6.62266,-78.3417 0/0:14:14,0:14:540:0:0:0,-4.21442,-48.9388 dDocent_Contig_11502 7 . G A 2563.78 . AB=0.193878;ABP=82.7787;AC=2;AF=0.166667;AN=12;AO=19;CIGAR=1X1M1X;DP=169;DPB=169;DPRA=0;EPP=44.2683;EPPR=133.299;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=725;QR=2013;RO=60;RPL=0;RPP=44.2683;RPPR=133.299;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=60;SRP=133.299;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:20:4,2,14:4:143:2,14:75,537:-42.8808,-37.9425,-48.9937,0,-5.49805,-7.43297 1|0:35:10,13,12:10:330:13,12:498,442:-47.3694,-9.50095,-32.2476,-14.2466,0,-37.2886 1|0:25:4,3,18:4:109:3,18:114,666:-54.1166,-45.9702,-53.6518,-0.854029,0,-3.97662 0|0:18:7,1,10:7:253:1,10:38,356:-26.8782,-25.8667,-46.2182,0,-17.5152,-17.6238 0|0:32:25,0,6:25:857:0,6:0,214:-10.1278,-17.6535,-87.2333,0,-69.7867,-67.9805 0|0:39:10,0,29:10:321:0,29:0,1085:-86.2163,-89.2266,-115.078,0,-26.1861,-17.4562 dDocent_Contig_11503 8 . C T 182.277 . AB=0.2;ABP=38.1882;AC=3;AF=0.3;AN=10;AO=15;CIGAR=1M1X;DP=228;DPB=228;DPRA=0.867647;EPP=35.5824;EPPR=443.819;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=5;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=458;QR=6674;RO=203;RPL=0;RPP=35.5824;RPPR=443.819;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=203;SRP=443.819;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:15:11,0,4,0:11:348:0,4,0:0,130,0:-7.50234,-10.8137,-38.8018,0,-28.3107,-27.1065,-10.8137,-38.8018,-28.3107,-38.8018 .:.:.:.:.:.:.:. 0|1:25:18,0,4,2:18:590:0,4,2:0,145,45:-6.47019,-11.8887,-59.5502,0,-47.7055,-46.5014,-8.48144,-56.112,-44.2686,-55.51 0|1:5:1,3,1,0:1:35:3,1,0:117,17,0:-9.48135,0,-2.03458,-8.60834,-1.79865,-11.1451,-9.78238,-2.93767,-11.4461,-12.6331 0|0:51:49,0,0,2:49:1646:0,0,2:0,0,38:0,-14.7505,-148.196,-14.7505,-148.196,-148.196,-11.7427,-145.384,-145.384,-144.782 0|0:132:124,0,6,2:124:4055:0,6,2:0,166,36:0,-37.3277,-364.837,-24.1297,-351.713,-349.907,-34.714,-362.201,-349.078,-361.599 dDocent_Contig_11505 19 . C A 1964.02 . AB=0.57377;ABP=5.89373;AC=5;AF=0.416667;AN=12;AO=75;CIGAR=1X;DP=305;DPB=305;DPRA=0;EPP=165.871;EPPR=502.449;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.991304;PAO=0;PQA=0;PQR=0;PRO=0;QA=2998;QR=9251;RO=230;RPL=0;RPP=165.871;RPPR=502.449;RPR=75;RUN=1;SAF=75;SAP=165.871;SAR=0;SRF=230;SRP=502.449;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:12,9:12:461:9:348:-25.3524,0,-35.5029 0/1:23:7,16:7:286:16:652:-52.0891,0,-19.1911 1/1:28:1,27:1:41:27:1075:-92.9411,-4.33427,0 0/1:17:7,10:7:286:10:400:-31.2415,0,-20.9973 0/0:112:107,5:107:4302:5:204:0,-14.9713,-368.381 0/0:104:96,8:96:3875:8:319:0,-2.23056,-319.654 dDocent_Contig_11506 9 . G A 186.608 . AB=0.193548;ABP=28.2974;AC=4;AF=0.333333;AN=12;AO=17;CIGAR=1X;DP=114;DPB=114;DPRA=0;EPP=39.9253;EPPR=213.643;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.989691;PAO=0;PQA=0;PQR=0;PRO=0;QA=507;QR=3463;RO=97;RPL=0;RPP=39.9253;RPPR=213.643;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=97;SRP=213.643;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:14,1:14:524:1:15:0,-3.01546,-46.0006 0/0:21:19,2:19:658:2:64:0,-0.243259,-53.4499 0/0:42:39,3:39:1367:3:91:0,-4.15517,-114.813 0/1:25:21,4:21:767:4:123:-3.84338,0,-61.8197 1/1:5:0,5:0:0:5:160:-14.7138,-1.50515,0 0/1:6:4,2:4:147:2:54:-3.32054,0,-11.7819 dDocent_Contig_11507 111 . T C 846.558 . AB=0.264865;ABP=91.8529;AC=4;AF=0.333333;AN=12;AO=68;CIGAR=1X;DP=482;DPB=482;DPRA=2.8125;EPP=150.67;EPPR=902;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2191;QR=14044;RO=414;RPL=0;RPP=150.67;RPPR=902;RPR=68;RUN=1;SAF=0;SAP=150.67;SAR=68;SRF=0;SRP=902;SRR=414;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:32,0:32:1095:0:0:0,-9.63296,-98.8581 0/1:20:18,2:18:615:2:70:-0.626796,0,-49.6511 0/1:22:20,2:20:687:2:70:-0.0247359,0,-55.5287 0/1:62:33,29:33:1119:29:941:-66.3243,0,-82.3511 0/1:81:65,16:65:2170:16:507:-21.5495,0,-171.186 0/0:265:246,19:246:8358:19:603:0,-25.2029,-697.73 dDocent_Contig_11508 10 . T A 133.107 . AB=0.285714;ABP=11.386;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=112;DPB=112;DPRA=1.15385;EPP=16.0391;EPPR=233.186;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=231;QR=4029;RO=106;RPL=0;RPP=16.0391;RPPR=233.186;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=106;SRP=233.186;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:13:13,0:13:502:0:0:0,-3.91339,-45.5228 0/0:5:5,0:5:188:0:0:0,-1.50515,-17.2837 0/0:16:16,0:16:637:0:0:0,-4.81648,-57.666 0/0:20:20,0:20:750:0:0:0,-6.0206,-67.8166 0/1:21:15,6:15:568:6:231:-14.8335,0,-45.1365 0/0:37:37,0:37:1384:0:0:0,-11.1381,-124.828 dDocent_Contig_11509 29 . T C 20158 . AB=0.766082;ABP=318.483;AC=8;AF=0.666667;AN=12;AO=622;CIGAR=1X;DP=755;DPB=755;DPRA=0;EPP=1353.67;EPPR=291.816;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.998392;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=24676;QR=5123;RO=133;RPL=0;RPP=1353.67;RPPR=291.816;RPR=622;RUN=1;SAF=622;SAP=1353.67;SAR=0;SRF=133;SRP=291.816;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:96:5,91:5:173:91:3602:-308.311,-12.9965,0 0/1:101:36,65:36:1399:65:2588:-202.645,0,-95.7735 0/1:168:28,140:28:1089:140:5601:-453.337,0,-47.7297 1/1:146:8,138:8:300:138:5402:-458.683,-16.6,0 0/1:104:22,82:22:859:82:3250:-261.258,0,-46.3197 0/1:140:34,106:34:1303:106:4233:-338.787,0,-75.3968 dDocent_Contig_11510 13 . T C 202.264 . AB=0.151786;ABP=120.968;AC=4;AF=0.333333;AN=12;AO=19;CIGAR=1X;DP=183;DPB=183;DPRA=0;EPP=44.2683;EPPR=359.132;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.421053;PAIREDR=0.493902;PAO=0;PQA=0;PQR=0;PRO=0;QA=744;QR=6392;RO=164;RPL=0;RPP=44.2683;RPPR=359.132;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=164;SRP=359.132;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:26,5:26:1026:5:199:-8.95643,0,-83.3043 0/1:36:31,5:31:1209:5:200:-7.54225,0,-98.2529 0/0:32:31,1:31:1205:1:40:0,-5.63728,-104.728 0/1:24:20,4:20:789:4:146:-6.26853,0,-64.1046 0/1:21:18,3:18:705:3:118:-4.68088,0,-57.4576 0/0:39:38,1:38:1458:1:41:0,-7.6456,-127.386 dDocent_Contig_11511 16 . C A 339.683 . AB=0.40625;ABP=5.45321;AC=2;AF=0.166667;AN=12;AO=18;CIGAR=1X;DP=174;DPB=174;DPRA=0.66;EPP=42.0968;EPPR=341.76;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.388889;PAIREDR=0.641026;PAO=0;PQA=0;PQR=0;PRO=0;QA=710;QR=6258;RO=156;RPL=0;RPP=42.0968;RPPR=341.76;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=156;SRP=341.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:37,3:37:1483:3:119:0,-0.946185,-122.624 0/1:18:13,5:13:496:5:198:-12.7786,0,-39.5497 0/1:14:6,8:6:242:8:314:-24.4112,0,-17.9425 0/0:27:25,2:25:1011:2:79:0,-0.630178,-83.7858 0/0:22:22,0:22:882:0:0:0,-6.62266,-79.6897 0/0:53:53,0:53:2144:0:0:0,-15.9546,-193.131 dDocent_Contig_11512 50 . C T 685.82 . AB=0.190476;ABP=177.762;AC=4;AF=0.333333;AN=12;AO=40;CIGAR=1X;DP=289;DPB=289;DPRA=1.32911;EPP=89.8692;EPPR=543.707;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.625;PAIREDR=0.763052;PAO=0;PQA=0;PQR=0;PRO=0;QA=1525;QR=9382;RO=249;RPL=40;RPP=89.8692;RPPR=543.707;RPR=0;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=249;SRP=543.707;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:38,4:38:1452:4:155:-1.68218,0,-118.311 0/1:56:49,7:49:1853:7:271:-7.89863,0,-150.16 0/0:38:38,0:38:1455:0:0:0,-11.4391,-131.225 0/1:58:41,17:41:1495:17:653:-41.6455,0,-117.354 0/1:54:42,12:42:1606:12:446:-24.2262,0,-128.548 0/0:41:41,0:41:1521:0:0:0,-12.3422,-137.155 dDocent_Contig_11513 13 . C G 3813.64 . AB=0.116129;ABP=201.399;AC=2;AF=0.166667;AN=12;AO=18;CIGAR=1X1M1X2M1X;DP=230;DPB=230;DPRA=0;EPP=42.0968;EPPR=189.757;GTI=0;LEN=1;MEANALT=2.75;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=682;QR=3414;RO=86;RPL=0;RPP=42.0968;RPPR=189.757;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=86;SRP=189.757;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:17:13,0,4:13:515:0,4:0,160:-9.66629,-13.5797,-55.9663,0,-42.7853,-41.5811 0|0:53:26,2,25:26:1033:2,25:77,987:-73.3972,-74.9023,-159.347,0,-78.7348,-77.5306 0|0:25:16,1,8:16:631:1,8:38,306:-20.2944,-21.9946,-73.6154,0,-48.8116,-49.5191 0|0:58:25,0,32:25:993:0,32:0,1256:-95.7662,-103.292,-185.044,0,-81.7476,-72.1146 1|0:25:0,7,18:0:0:7,18:262,717:-80.8882,-59.4409,-57.3337,-21.828,0,-16.4094 1|0:52:6,8,35:6:242:8,35:305,1333:-112.574,-89.3597,-106.903,-5.05662,0,-14.476 dDocent_Contig_11514 2 . A G 2940.83 . AB=0.5;ABP=3.0103;AC=6;AF=0.6;AN=10;AO=56;CIGAR=1X4I1X3M;DP=109;DPB=196.2;DPRA=0;EPP=124.613;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=0;NS=5;NUMALT=2;ODDS=0;PAIRED=0.0892857;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1917;QR=0;RO=0;RPL=0;RPP=124.613;RPPR=0;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:23:0,13,9:0:0:13,9:449,305:-61.2069,-24.7218,-20.8085,-36.4778,0,-33.7685 1|0:44:0,20,24:0:0:20,24:685,814:-121.959,-66.3492,-60.3286,-55.9505,0,-48.7257 1|0:28:0,16,12:0:0:16,12:539,411:-77.3814,-33.7073,-28.8908,-44.014,0,-40.4017 1|0:11:0,4,7:0:0:4,7:139,239:-31.0402,-19.7368,-18.5327,-11.6486,0,-9.54136 .:.:.:.:.:.:.:. 1|1:3:0,3,0:0:0:3,0:105,0:-9.79616,-0.90309,0,-9.79616,-0.90309,-9.79616 dDocent_Contig_11515 16 . T C 41.3008 . AB=0.157895;ABP=22.325;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=119;DPB=119;DPRA=0.95;EPP=9.52472;EPPR=252.73;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.713043;PAO=0;PQA=0;PQR=0;PRO=0;QA=122;QR=4589;RO=115;RPL=0;RPP=9.52472;RPPR=252.73;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=115;SRP=252.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:8:8,0:8:322:0:0:0,-2.40824,-29.3481 0/1:19:16,3:16:646:3:122:-5.65292,0,-52.7549 0/0:16:16,0:16:625:0:0:0,-4.81648,-56.5821 0/0:36:35,0:35:1397:0:0:0,-10.536,-125.607 0/0:16:16,0:16:634:0:0:0,-4.81648,-57.3922 0/0:24:24,0:24:965:0:0:0,-7.22472,-87.1494 dDocent_Contig_11516 8 . C A 1496.53 . AB=0.0751445;ABP=274.244;AC=5;AF=0.416667;AN=12;AO=13;CIGAR=1X4M;DP=184;DPB=184;DPRA=14.4167;EPP=31.2394;EPPR=231.015;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=471;QR=3803;RO=105;RPL=0;RPP=31.2394;RPPR=231.015;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=105;SRP=231.015;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:19:7,11,1:7:240:11,1:363,34:-27.2222,0,-16.1695,-26.5706,-16.7232,-45.753 0|1:8:6,2,0:6:205:2,0:76,0:-4.80643,0,-16.3734,-6.61261,-16.9754,-23.2179 0|0:3:3,0,0:3:119:0,0:0,0:0,-0.90309,-11.0954,-0.90309,-11.0954,-11.0954 0|1:16:11,3,2:11:413:3,2:116,70:-6.23853,0,-32.9504,-3.86898,-28.1619,-37.0902 0|1:74:37,33,4:37:1323:33,4:1230,154:-89.5328,0,-97.8913,-88.0249,-95.178,-194.663 0|1:64:41,15,6:41:1503:15,6:533,213:-31.0744,0,-118.314,-26.0654,-105.478,-147.092 dDocent_Contig_11517 21 . G A 3223.41 . AB=0.337912;ABP=86.0751;AC=5;AF=0.416667;AN=12;AO=127;CIGAR=1X;DP=470;DPB=470;DPRA=0;EPP=278.787;EPPR=747.825;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.952756;PAIREDR=0.979592;PAO=0;PQA=0;PQR=0;PRO=0;QA=5044;QR=13704;RO=343;RPL=0;RPP=278.787;RPPR=747.825;RPR=127;RUN=1;SAF=127;SAP=278.787;SAR=0;SRF=343;SRP=747.825;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:86:65,21:65:2586:21:817:-47.9543,0,-206.977 0/1:65:43,22:43:1727:22:881:-60.0286,0,-136.079 0/1:47:17,30:17:670:30:1186:-92.8689,0,-46.478 0/1:79:46,33:46:1846:33:1324:-95.64,0,-142.564 0/1:87:70,17:70:2791:17:677:-35.0708,0,-225.104 0/0:106:102,4:102:4084:4:159:0,-17.2177,-352.838 dDocent_Contig_11519 8 . C T 63.67 . AB=0.177778;ABP=43.5927;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=213;DPB=213;DPRA=1.83784;EPP=29.068;EPPR=439.476;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0.771144;PAO=0;PQA=0;PQR=0;PRO=0;QA=389;QR=6939;RO=201;RPL=0;RPP=29.068;RPPR=439.476;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=201;SRP=439.476;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:657:0:0:0,-5.71957,-59.4461 0/0:40:40,0:40:1344:0:0:0,-12.0412,-121.227 0/0:11:11,0:11:343:0:0:0,-3.31133,-31.1676 0/0:41:41,0:41:1434:0:0:0,-12.3422,-129.328 0/1:45:37,8:37:1315:8:235:-7.88987,0,-105.093 0/0:57:53,4:53:1846:4:154:0,-2.92525,-152.155 dDocent_Contig_11521 8 . C G 150.252 . AB=0.714286;ABP=5.80219;AC=3;AF=0.25;AN=12;AO=6;CIGAR=1X;DP=198;DPB=198;DPRA=0.0842105;EPP=16.0391;EPPR=419.933;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994792;PAO=0;PQA=0;PQR=0;PRO=0;QA=197;QR=6343;RO=192;RPL=0;RPP=16.0391;RPPR=419.933;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=192;SRP=419.933;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:80:80,0:80:2703:0:0:0,-24.0824,-243.477 0/0:36:36,0:36:1160:0:0:0,-10.8371,-104.673 0/0:21:21,0:21:683:0:0:0,-6.32163,-61.763 0/0:53:53,0:53:1723:0:0:0,-15.9546,-155.319 1/1:1:0,1:0:0:1:30:-2.99957,-0.30103,0 0/1:7:2,5:2:74:5:167:-13.2469,0,-4.91867 dDocent_Contig_11522 37 . T C 3368.39 . AB=0.541176;ABP=4.26209;AC=5;AF=0.416667;AN=12;AO=110;CIGAR=1X;DP=348;DPB=348;DPRA=1.73333;EPP=241.872;EPPR=519.821;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4378;QR=9450;RO=238;RPL=0;RPP=241.872;RPPR=519.821;RPR=110;RUN=1;SAF=110;SAP=241.872;SAR=0;SRF=238;SRP=519.821;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:36,0:36:1438:0:0:0,-10.8371,-129.675 0/1:85:39,46:39:1568:46:1826:-138.965,0,-115.77 0/0:69:65,4:65:2574:4:163:0,-5.71264,-216.739 0/0:101:97,4:97:3851:4:162:0,-15.4371,-331.63 1/1:11:0,11:0:0:11:428:-38.8699,-3.31133,0 1/1:46:1,45:1:19:45:1799:-160.225,-11.9474,0 dDocent_Contig_11523 30 . C A 60.5256 . AB=0.230769;ABP=11.1951;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=126;DPB=126;DPRA=1.47059;EPP=13.8677;EPPR=265.758;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.652893;PAO=0;PQA=0;PQR=0;PRO=0;QA=202;QR=4761;RO=121;RPL=0;RPP=13.8677;RPPR=265.758;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=121;SRP=265.758;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:13:10,3:10:407:3:120:-7.2743,0,-33.077 0/0:42:42,0:42:1644:0:0:0,-12.6433,-148.183 0/0:21:20,1:20:763:1:41:0,-2.22706,-64.8896 0/0:41:40,1:40:1585:1:41:0,-8.24766,-138.794 0/0:3:3,0:3:123:0:0:0,-0.90309,-11.4648 0/0:6:6,0:6:239:0:0:0,-1.80618,-21.885 dDocent_Contig_11524 12 . C A 4738.99 . AB=0.0408163;ABP=182.489;AC=0;AF=0;AN=12;AO=7;CIGAR=1X2M1X2M;DP=310;DPB=310;DPRA=0;EPP=18.2106;EPPR=298.331;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=265;QR=5276;RO=136;RPL=0;RPP=18.2106;RPPR=298.331;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=136;SRP=298.331;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:35:20,0,3,12:20:781:0,3,12:0,119,469:-32.5249,-38.5455,-102.745,-28.7483,-92.9487,-92.0456,0,-64.1952,-54.3984,-60.5829 0|0:63:44,0,1,18:44:1711:0,1,18:0,34,717:-45.8505,-59.0958,-199.691,-56.3409,-196.934,-196.633,0,-140.647,-137.89,-135.229 0|0:42:24,0,0,18:24:952:0,0,18:0,0,719:-52.393,-59.6177,-137.982,-59.6177,-137.982,-137.982,0,-78.7621,-78.7621,-73.3435 0|0:52:35,1,0,16:35:1342:1,0,16:38,0,635:-41.7462,-49.1668,-158.995,-52.2823,-159.296,-162.412,0,-107.025,-110.141,-105.325 0|0:67:9,6,0,52:9:347:6,0,52:236,0,2038:-164.853,-148.149,-174.835,-167.562,-176.642,-196.055,0,-9.07265,-28.489,-12.8354 0|0:51:4,0,3,44:4:143:0,3,44:0,112,1764:-145.753,-146.958,-158.607,-137.79,-149.439,-148.536,-1.60146,-13.2453,-4.06935,0 dDocent_Contig_11525 38 . T C 6144.1 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=198;CIGAR=1X;DP=198;DPB=198;DPRA=0;EPP=432.962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=3.38813e-21;PAIRED=0.90404;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6797;QR=0;RO=0;RPL=0;RPP=432.962;RPPR=0;RPR=198;RUN=1;SAF=0;SAP=432.962;SAR=198;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:15:0,15:0:0:15:516:-46.7671,-4.51545,0 1/1:30:0,30:0:0:30:1046:-94.4525,-9.0309,0 1/1:39:0,39:0:0:39:1313:-118.464,-11.7402,0 1/1:31:0,31:0:0:31:1072:-96.7893,-9.33193,0 1/1:44:0,44:0:0:44:1500:-135.291,-13.2453,0 1/1:39:0,39:0:0:39:1350:-121.801,-11.7402,0 dDocent_Contig_11526 15 . C T 130.19 . AB=0.135802;ABP=96.33;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=232;DPB=232;DPRA=1.46809;EPP=33.4109;EPPR=476.391;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.714286;PAIREDR=0.775229;PAO=0;PQA=0;PQR=0;PRO=0;QA=565;QR=8721;RO=218;RPL=0;RPP=33.4109;RPPR=476.391;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=218;SRP=476.391;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:20,3:20:796:3:119:-4.17132,0,-65.0268 0/0:19:19,0:19:772:0:0:0,-5.71957,-69.7995 0/0:25:25,0:25:986:0:0:0,-7.52575,-89.0355 0/1:58:50,8:50:2006:8:324:-12.0691,0,-163.266 0/0:57:54,3:54:2140:3:122:0,-5.78622,-181.411 0/0:50:50,0:50:2021:0:0:0,-15.0515,-182.072 dDocent_Contig_11527 126 . A C 1016.76 . AB=0.25;ABP=81.1833;AC=7;AF=0.583333;AN=12;AO=43;CIGAR=6M2X;DP=151;DPB=152.375;DPRA=0;EPP=96.3836;EPPR=207.129;GTI=0;LEN=1;MEANALT=2;MQM=44.9767;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.968085;PAO=0;PQA=0;PQR=0;PRO=0;QA=1505;QR=3225;RO=94;RPL=0;RPP=96.3836;RPPR=207.129;RPR=43;RUN=1;SAF=0;SAP=96.3836;SAR=43;SRF=0;SRP=207.129;SRR=94;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:27:20,3,4:20:694:3,4:105,140:-5.17268,-3.12769,-58.6429,0,-48.36,-55.2246 0|1:31:21,0,8:21:714:0,8:0,279:-16.24,-22.5617,-80.4878,0,-58.0089,-55.6007 0|1:19:15,0,4:15:515:0,4:0,141:-7.09378,-11.6092,-53.4246,0,-42.161,-40.9569 0|1:52:38,2,11:38:1302:2,11:66,386:-18.6443,-25.1775,-130.289,0,-100.865,-102.46 0|1:15:0,6,9:0:0:6,9:204,316:-41.9804,-25.5805,-23.7743,-16.7403,0,-14.031 1|1:7:0,0,7:0:0:0,7:0,243:-21.7669,-21.7669,-21.7669,-2.10721,-2.10721,0 dDocent_Contig_11530 205 . G A 70.3911 . AB=0.189189;ABP=34.0565;AC=3;AF=0.375;AN=8;AO=7;CIGAR=1X;DP=55;DPB=55;DPRA=0.685185;EPP=18.2106;EPPR=107.241;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=250;QR=1701;RO=48;RPL=7;RPP=18.2106;RPPR=107.241;RPR=0;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=107.241;SRR=48;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:611:0:0:0,-5.41854,-55.3 0/1:8:6,2:6:222:2:72:-4.4284,0,-17.9298 0/1:13:11,2:11:405:2:72:-2.92325,0,-32.8838 0/1:16:13,3:13:463:3:106:-5.07216,0,-37.1875 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11531 16 . G T 2128.2 . AB=0.215686;ABP=325.282;AC=4;AF=0.333333;AN=12;AO=109;CIGAR=1X;DP=597;DPB=597;DPRA=0;EPP=239.701;EPPR=1062.69;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.944954;PAIREDR=0.946721;PAO=0;PQA=0;PQR=0;PRO=0;QA=4373;QR=19422;RO=488;RPL=0;RPP=239.701;RPPR=1062.69;RPR=109;RUN=1;SAF=109;SAP=239.701;SAR=0;SRF=488;SRP=1062.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:52:27,25:27:1046:25:999:-74.551,0,-78.7708 0/0:87:81,6:81:3257:6:245:0,-3.76014,-270.761 0/0:51:47,4:47:1874:4:161:0,-0.477045,-153.987 0/1:59:53,6:53:2107:6:244:-4.57806,0,-172.046 0/1:151:129,22:129:5133:22:881:-34.1414,0,-416.384 0/1:197:151,46:151:6005:46:1843:-106.771,0,-480.922 dDocent_Contig_11532 21 . C A 3214.34 . AB=0.58427;ABP=13.9897;AC=6;AF=0.5;AN=12;AO=104;CIGAR=1M1X5M;DP=178;DPB=174.571;DPRA=0;EPP=228.843;EPPR=135.47;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.865385;PAIREDR=0.901639;PAO=0;PQA=0;PQR=0;PRO=0;QA=4128;QR=2427;RO=61;RPL=0;RPP=228.843;RPPR=135.47;RPR=104;RUN=1;SAF=104;SAP=228.843;SAR=0;SRF=61;SRP=135.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:14:1,4,9:1:40:4,9:162,362:-39.5982,-26.5401,-28.6308,-10.0682,0,-10.653 0|1:29:6,0,23:6:237:0,23:0,902:-72.7523,-74.5585,-94.0609,0,-19.8964,-12.9727 0|1:22:10,0,12:10:403:0,12:0,484:-37.2888,-40.2991,-73.5167,0,-33.6203,-30.008 0|1:46:18,8,20:18:720:8,20:325,803:-60.7428,-39.3544,-96.2545,0,-32.4972,-53.2841 0|1:33:12,0,20:12:468:0,20:0,782:-60.6425,-64.2549,-102.72,0,-38.4476,-32.427 0|1:34:14,0,20:14:559:0,20:0,795:-61.6317,-65.8462,-111.888,0,-46.4397,-40.4191 dDocent_Contig_11533 17 . C A 2397.65 . AB=0.0882353;ABP=103.153;AC=0;AF=0;AN=12;AO=7;CIGAR=1M1X2M1X;DP=162;DPB=169.2;DPRA=0;EPP=18.2106;EPPR=159.356;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.571429;PAIREDR=0.861111;PAO=0;PQA=0;PQR=0;PRO=0;QA=271;QR=2846;RO=72;RPL=0;RPP=18.2106;RPPR=159.356;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=72;SRP=159.356;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:21:0,3,6,12:0:0:3,6,12:108,235,482:-59.0747,-50.2731,-49.3701,-39.7513,-30.9526,-37.9451,-19.345,-10.5485,0,-15.7326 0|0:18:11,0,1,6:11:437:0,1,6:0,40,245:-16.9112,-20.2225,-56.1921,-16.9286,-52.8971,-52.5961,0,-35.9731,-32.6777,-34.1669 0|0:32:7,0,0,25:7:284:0,0,25:0,0,1007:-81.2887,-83.3959,-106.818,-83.3959,-106.818,-106.818,0,-23.8266,-23.8266,-16.3008 0|0:47:20,3,2,22:20:802:3,2,22:122,80,882:-66.6419,-62.5987,-127.774,-66.0725,-122.087,-131.549,0,-56.0123,-59.4862,-59.4536 0|0:31:29,1,0,1:29:1133:1,0,1:41,0,41:0,-5.34579,-98.1611,-8.72987,-98.4622,-101.847,-5.34579,-95.0774,-98.4622,-98.1611 0|0:13:5,0,0,8:5:190:0,0,8:0,0,318:-25.0706,-26.5758,-42.1469,-26.5758,-42.1469,-42.1469,0,-15.9575,-15.9575,-13.5492 dDocent_Contig_11534 61 . T A 10142.3 . AB=0.693498;ABP=108.054;AC=7;AF=0.583333;AN=12;AO=315;CIGAR=1X6M;DP=419;DPB=417.571;DPRA=0;EPP=687.024;EPPR=191.928;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=2.77556e-17;PAIRED=0.996825;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=12406;QR=3364;RO=87;RPL=315;RPP=687.024;RPPR=191.928;RPR=0;RUN=1;SAF=315;SAP=687.024;SAR=0;SRF=87;SRP=191.928;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:21:2,0,0,19:2:78:0,0,19:0,0,748:-61.3217,-61.9237,-68.3351,-61.9237,-68.3351,-68.3351,0,-6.80141,-6.80141,-1.08184 0|1:39:15,4,0,19:15:580:4,0,19:159,0,730:-55.4285,-46.8489,-93.2914,-59.9439,-94.4956,-107.589,0,-34.5699,-47.6657,-41.9461 0|1:77:26,0,0,49:26:989:0,0,49:0,0,1927:-150.704,-158.531,-239.631,-158.531,-239.631,-239.631,0,-81.1318,-81.1318,-66.3813 0|1:113:37,0,0,72:37:1450:0,0,72:0,0,2866:-224.861,-236,-355.234,-236,-355.234,-355.234,0,-119.246,-119.246,-97.5722 0|1:73:7,0,0,65:7:267:0,0,65:0,0,2548:-207.707,-209.814,-231.717,-209.814,-231.717,-231.717,0,-22.1667,-22.1667,-2.5998 1|1:96:0,0,5,91:0:0:0,5,91:0,194,3587:-322.488,-322.488,-322.488,-306.55,-306.55,-305.045,-27.3937,-27.3937,-11.0681,0 dDocent_Contig_11535 17 . C T 1002.22 . AB=0.402174;ABP=10.6577;AC=3;AF=0.25;AN=12;AO=40;CIGAR=1X;DP=147;DPB=147;DPRA=0;EPP=89.8692;EPPR=233.186;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.65;PAIREDR=0.783019;PAO=0;PQA=0;PQR=0;PRO=0;QA=1587;QR=4140;RO=106;RPL=0;RPP=89.8692;RPPR=233.186;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=106;SRP=233.186;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:10,8:10:383:8:313:-22.7068,0,-28.9952 0/0:19:18,1:18:717:1:37:0,-2.02174,-61.1575 0/0:15:14,1:14:562:1:41:0,-0.420883,-46.829 0/1:27:20,7:20:735:7:271:-16.6261,0,-58.3267 0/0:21:20,1:20:794:1:40:0,-2.32595,-67.7799 0/1:46:24,22:24:949:22:885:-66.1104,0,-71.868 dDocent_Contig_11536 111 . G T 276.334 . AB=0.185185;ABP=26.2531;AC=2;AF=0.166667;AN=12;AO=5;CIGAR=1X1M1X1M1X;DP=107;DPB=107;DPRA=0.5;EPP=13.8677;EPPR=191.928;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0.977011;PAO=0;PQA=0;PQR=0;PRO=0;QA=167;QR=2931;RO=87;RPL=0;RPP=13.8677;RPPR=191.928;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=191.928;SRR=87;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:21:17,3,1,0:17:583:3,1,0:98,35,0:-2.77959,0,-46.4246,-5.04354,-44.4795,-52.0906,-7.8971,-47.3277,-52.3917,-55.2398 0|0:13:9,0,2,2:9:303:0,2,2:0,68,70:-2.99119,-5.70046,-30.2467,-0.18952,-24.7307,-24.1286,0,-24.5493,-19.0328,-23.9472 0|0:13:9,0,3,0:9:310:0,3,0:0,103,0:-5.76186,-8.47113,-33.6775,0,-25.3107,-24.4076,-8.47113,-33.6775,-25.3107,-33.6775 0|0:52:52,0,0,0:52:1735:0,0,0:0,0,0:0,-15.6536,-156.436,-15.6536,-156.436,-156.436,-15.6536,-156.436,-156.436,-156.436 1|0:6:0,2,4,0:0:0:2,4,0:69,132,0:-16.613,-11.0023,-10.4002,-5.9506,0,-4.74648,-16.613,-11.0023,-5.9506,-16.613 0|0:2:0,0,0,2:0:0:0,0,2:0,0,70:-6.6474,-6.6474,-6.6474,-6.6474,-6.6474,-6.6474,-0.60206,-0.60206,-0.60206,0 dDocent_Contig_11537 10 . G A 53.133 . AB=0.133333;ABP=55.5599;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=225;DPB=225;DPRA=1.12264;EPP=20.3821;EPPR=474.22;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.981567;PAO=0;PQA=0;PQR=0;PRO=0;QA=289;QR=8163;RO=217;RPL=0;RPP=20.3821;RPPR=474.22;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=217;SRP=474.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:51:51,0:51:1900:0:0:0,-15.3525,-171.215 0/1:33:30,3:30:1127:3:115:-0.790114,0,-91.7656 0/0:54:54,0:54:2087:0:0:0,-16.2556,-188.022 0/0:74:72,2:72:2681:2:62:0,-16.3873,-235.544 0/0:1:1,0:1:36:0:0:0,-0.30103,-3.59827 0/1:12:9,3:9:332:3:112:-6.83136,0,-26.6073 dDocent_Contig_11538 28 . A T 101.173 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X2M1X1M2D2M;DP=3;DPB=2.33333;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=49.6667;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=105;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:76:-7.21481,-0.60206,0 1|1:1:0,1:0:0:1:29:-2.59924,-0.30103,0 dDocent_Contig_11539 1 . N G 188.104 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=51.3333;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=205;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:136:-12.5757,-1.20412,0 1/1:2:0,2:0:0:2:69:-5.93297,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11540 10 . G T 1051.46 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=7;CIGAR=1X2M1X;DP=614;DPB=614;DPRA=0.770992;EPP=18.2106;EPPR=1071.37;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=57.4797;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.95122;PAO=0;PQA=0;PQR=0;PRO=0;QA=270;QR=17256;RO=492;RPL=0;RPP=18.2106;RPPR=1071.37;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=492;SRP=1071.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:79:69,0,9,0:69:2392:0,9,0:0,314,0:-4.73054,-25.5016,-219.457,0,-193.927,-191.218,-25.5016,-219.457,-193.927,-219.457 0|0:131:110,0,8,7:110:3877:0,8,7:0,292,135:0,-33.1133,-346.508,-9.22153,-322.656,-320.248,-23.1231,-336.474,-312.623,-334.367 0|0:50:40,0,5,3:40:1363:0,5,3:0,190,33:-3.65698,-15.6982,-114.73,0,-99.1385,-97.6333,-13.6972,-112.675,-97.0845,-111.772 0|0:101:83,7,5,1:83:2904:7,5,1:270,194,11:0,-2.80211,-234.569,-9.03813,-220.733,-241.404,-24.3117,-235.989,-242.223,-257.863 0|0:115:78,0,33,0:78:2776:0,33,0:0,1272,0:-81.0792,-104.559,-329.145,0,-224.682,-214.748,-104.559,-329.145,-224.682,-329.145 0|0:138:112,0,19,4:112:3944:0,19,4:0,692,44:-22.8998,-56.6151,-376.066,0,-319.548,-313.829,-53.8987,-373.317,-316.801,-372.113 dDocent_Contig_11543 18 . C T 428.965 . AB=0.163399;ABP=153.58;AC=1;AF=0.0833333;AN=12;AO=29;CIGAR=1X;DP=334;DPB=334;DPRA=4.30189;EPP=65.983;EPPR=665.309;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996721;PAO=0;PQA=0;PQR=0;PRO=0;QA=1160;QR=12283;RO=305;RPL=0;RPP=65.983;RPPR=665.309;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=305;SRP=665.309;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:778:0:0:0,-5.71957,-70.337 0/0:23:23,0:23:936:0:0:0,-6.92369,-84.5404 0/0:17:17,0:17:682:0:0:0,-5.11751,-61.7066 0/0:47:47,0:47:1869:0:0:0,-14.1484,-168.415 0/0:75:71,4:71:2852:4:158:0,-7.97789,-242.173 0/1:153:128,25:128:5166:25:1002:-44.4194,0,-418.724 dDocent_Contig_11544 14 . A G 21398.7 . AB=0.718294;ABP=371.797;AC=8;AF=0.666667;AN=12;AO=640;CIGAR=4M1X;DP=891;DPB=1028.2;DPRA=0;EPP=1392.75;EPPR=317.874;GTI=0;LEN=1;MEANALT=3.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.11022e-16;PAIRED=0.996875;PAIREDR=0.993103;PAO=0;PQA=0;PQR=0;PRO=0;QA=25027;QR=5605;RO=145;RPL=0;RPP=1392.75;RPPR=317.874;RPR=640;RUN=1;SAF=640;SAP=1392.75;SAR=0;SRF=145;SRP=317.874;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:175:35,14,124:35:1343:14,124:534,4864:-389.466,-356.2,-462.209,0,-66.4296,-72.9057 0|1:229:44,2,181:44:1715:2,181:62,7039:-565.147,-573.419,-713.775,0,-136.021,-86.5056 0|1:78:13,4,60:13:511:4,60:150,2343:-188.722,-180.35,-221.178,0,-29.7834,-24.0065 0|1:215:50,31,132:50:1917:31,132:1203,5202:-412.898,-329.111,-477.102,0,-58.4812,-117.587 1|1:79:0,11,68:0:0:11,68:425,2680:-255.768,-220.863,-217.551,-35.292,0,-14.8219 1|1:115:3,36,75:3:119:36,75:1363,2899:-339.094,-228.272,-227.231,-101.92,0,-89.1404 dDocent_Contig_11545 107 . N G 207.037 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=214;QR=0;RO=0;RPL=0;RPP=18.2106;RPPR=0;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:5:0,5:0:0:5:146:-13.4272,-1.50515,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11546 13 . T C 11415.8 . AB=0.41195;ABP=45.8388;AC=7;AF=0.583333;AN=12;AO=300;CIGAR=2X;DP=674;DPB=674;DPRA=0;EPP=654.452;EPPR=597.994;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11848;QR=10750;RO=274;RPL=0;RPP=654.452;RPPR=597.994;RPR=300;RUN=1;SAF=300;SAP=654.452;SAR=0;SRF=274;SRP=597.994;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:136:64,72,0:64:2485:72,0:2836,0:-214.424,0,-182.874,-233.69,-204.548,-437.847 0|1:119:76,35,8:76:2990:35,8:1353,325:-88.2268,0,-235.395,-84.2964,-219.125,-327.836 0|1:149:72,77,0:72:2819:77,0:3027,0:-227.678,0,-208.976,-249.353,-232.156,-481.116 0|1:104:45,59,0:45:1782:59,0:2357,0:-180.981,0,-129.3,-194.527,-147.061,-341.191 1|1:38:0,38,0:0:0:38,0:1505,0:-135.701,-11.4391,0,-135.701,-11.4391,-135.701 1|0:128:17,19,92:17:674:19,92:770,3655:-303.789,-245.409,-295.166,-8.02881,0,-35.806 dDocent_Contig_11547 33 . T C 2204.99 . AB=0.430108;ABP=10.9023;AC=5;AF=0.416667;AN=12;AO=80;CIGAR=1X;DP=200;DPB=200;DPRA=2.65714;EPP=176.728;EPPR=263.587;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.525;PAIREDR=0.65;PAO=0;PQA=0;PQR=0;PRO=0;QA=3156;QR=4702;RO=120;RPL=0;RPP=176.728;RPPR=263.587;RPR=80;RUN=1;SAF=80;SAP=176.728;SAR=0;SRF=120;SRP=263.587;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:15,20:15:594:20:780:-59.9879,0,-43.263 0/1:42:24,18:24:929:18:705:-51.1335,0,-71.2752 0/1:31:21,10:21:831:10:391:-26.2115,0,-65.7749 0/1:48:32,16:32:1260:16:647:-44.1146,0,-99.2258 0/0:14:14,0:14:551:0:0:0,-4.21442,-49.9321 0/1:30:14,16:14:537:16:633:-48.2738,0,-39.6358 dDocent_Contig_11548 15 . A G 297.918 . AB=0.226415;ABP=37.4671;AC=3;AF=0.25;AN=12;AO=18;CIGAR=1X;DP=225;DPB=225;DPRA=1.8125;EPP=42.0968;EPPR=452.505;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=711;QR=8217;RO=207;RPL=0;RPP=42.0968;RPPR=452.505;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=207;SRP=452.505;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:36:-3.59827,-0.30103,0 0/1:53:41,12:41:1652:12:478:-27.415,0,-132.953 0/0:17:17,0:17:669:0:0:0,-5.11751,-60.5394 0/0:91:86,5:86:3403:5:197:0,-9.28882,-288.222 0/0:29:29,0:29:1144:0:0:0,-8.72987,-103.244 0/0:34:34,0:34:1349:0:0:0,-10.235,-121.673 dDocent_Contig_11549 15 . A G 3725.87 . AB=0.441606;ABP=11.1256;AC=5;AF=0.416667;AN=12;AO=121;CIGAR=1X2M2I1X2M;DP=274;DPB=330.667;DPRA=0;EPP=265.758;EPPR=170.214;GTI=0;LEN=1;MEANALT=3.66667;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0.743802;PAIREDR=0.818182;PAO=0;PQA=0;PQR=0;PRO=0;QA=4728;QR=3046;RO=77;RPL=0;RPP=265.758;RPPR=170.214;RPR=121;RUN=1;SAF=121;SAP=265.758;SAR=0;SRF=77;SRP=170.214;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:49:17,8,15,3,6:17:670:8,15,3,6:319,588,121,243:-43.2322,-22.0778,-74.785,0,-28.841,-50.5973,-38.3749,-67.2184,-45.138,-92.5874,-28.3105,-57.1542,-35.0737,-73.4516,-81.6203 0|1:36:14,8,11,3,0:14:554:8,11,3,0:318,429,110,0:-31.0495,-9.07718,-52.2677,0,-19.4127,-42.2858,-26.2776,-45.6888,-36.6107,-70.969,-35.2639,-54.6759,-45.5971,-71.8721,-80.8597 0|0:37:11,3,9,0,14:11:444:3,9,0,14:119,350,0,564:-43.1811,-36.6964,-72.397,-17.7346,-44.5417,-51.6278,-46.4924,-73.3001,-54.337,-83.096,0,-26.8118,-7.85069,-36.6078,-32.3933 0|1:56:21,1,19,8,6:21:819:1,19,8,6:36,739,319,240:-54.4064,-57.7914,-124.807,0,-64.3821,-61.5992,-34.454,-98.8356,-41.0452,-99.3643,-40.956,-105.337,-47.547,-82.0012,-106.468 0|1:21:2,0,17,2,0:2:80:0,17,2,0:0,672,79,0:-54.7005,-55.3026,-61.8932,0,-6.59265,-1.47514,-48.802,-55.3927,-0.0945461,-54.7906,-55.3026,-61.8932,-6.59265,-55.3927,-61.8932 0|1:75:12,0,50,9,0:12:479:0,50,9,0:0,1950,353,0:-156.676,-160.289,-199.741,0,-39.4588,-24.4073,-131.261,-170.714,-10.4303,-168.004,-160.289,-199.741,-39.4588,-170.714,-199.741 dDocent_Contig_11550 1 . N G 166.507 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=174;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:105:-9.79616,-0.90309,0 dDocent_Contig_11551 9 . T A 5146.34 . AB=0.224561;ABP=190.816;AC=9;AF=0.75;AN=12;AO=64;CIGAR=2M1X;DP=285;DPB=285;DPRA=0;EPP=141.985;EPPR=146.327;GTI=0;LEN=1;MEANALT=2.83333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2228;QR=2063;RO=66;RPL=0;RPP=141.985;RPPR=146.327;RPR=64;RUN=1;SAF=64;SAP=141.985;SAR=0;SRF=66;SRP=146.327;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:20:0,8,2,10:0:0:8,2,10:307,55,323:-51.3124,-26.0849,-23.6766,-46.9724,-21.7454,-46.3703,-25.2868,0,-20.9611,-22.2765 0|1:38:19,7,1,11:19:566:7,1,11:263,26,394:-26.4026,-10.5667,-53.6324,-30.0889,-53.7028,-74.9583,0,-23.5937,-43.1236,-41.849 1|1:43:5,25,1,12:5:147:25,1,12:947,26,434:-99.9201,-23.7672,-27.9428,-99.3894,-33.4343,-110.797,-66.0094,0,-75.6791,-74.1021 1|1:32:8,8,1,15:8:264:8,1,15:296,27,531:-43.7432,-21.9299,-40.8556,-44.0264,-41.1382,-65.0579,-2.90986,0,-22.1123,-19.7209 0|1:85:25,46,0,14:25:807:46,0,14:1753,0,477:-136.309,0,-51.2137,-143.834,-65.061,-208.892,-105.155,-26.3658,-170.207,-165.993 0|1:67:9,55,0,2:9:279:55,0,2:2083,0,69:-168.169,0,-5.86737,-170.878,-22.424,-193.262,-165.274,-16.8095,-187.657,-187.055 dDocent_Contig_11552 76 . C T 239.876 . AB=0.461538;ABP=3.17734;AC=3;AF=0.25;AN=12;AO=9;CIGAR=1X;DP=89;DPB=89;DPRA=0.438356;EPP=22.5536;EPPR=176.728;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.333333;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=316;QR=2808;RO=80;RPL=9;RPP=22.5536;RPPR=176.728;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=80;SRP=176.728;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:5:5,0:5:174:0:0:0,-1.50515,-16.002 0/0:17:17,0:17:588:0:0:0,-5.11751,-53.2464 0/0:39:39,0:39:1385:0:0:0,-11.7402,-124.949 0/0:12:12,0:12:423:0:0:0,-3.61236,-38.4055 1/1:3:0,3:0:0:3:101:-9.4236,-0.90309,0 0/1:13:7,6:7:238:6:215:-15.7858,0,-17.8385 dDocent_Contig_11553 45 . A G 3495.1 . AB=0.458647;ABP=6.9614;AC=4;AF=0.333333;AN=12;AO=122;CIGAR=1X;DP=332;DPB=332;DPRA=2.01515;EPP=267.93;EPPR=459.02;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990476;PAO=0;PQA=0;PQR=0;PRO=0;QA=4841;QR=8294;RO=210;RPL=0;RPP=267.93;RPPR=459.02;RPR=122;RUN=1;SAF=122;SAP=267.93;SAR=0;SRF=210;SRP=459.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:67:59,8:59:2319:8:321:-9.08839,0,-188.702 0/1:85:27,58:27:1054:58:2298:-181.394,0,-69.5617 0/1:110:57,53:57:2274:53:2101:-156.164,0,-171.704 0/0:64:64,0:64:2525:0:0:0,-19.2659,-227.396 0/0:2:2,0:2:81:0:0:0,-0.60206,-7.68573 0/1:4:1,3:1:41:3:121:-10.0759,0,-2.89045 dDocent_Contig_11554 15 . G A 121.15 . AB=0.134831;ABP=106.094;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=210;DPB=210;DPRA=1.47107;EPP=29.068;EPPR=432.962;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994949;PAO=0;PQA=0;PQR=0;PRO=0;QA=460;QR=7712;RO=198;RPL=0;RPP=29.068;RPPR=432.962;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=198;SRP=432.962;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:28,5:28:1052:5:195:-7.98784,0,-85.0246 0/0:47:47,0:47:1825:0:0:0,-14.1484,-164.469 0/0:35:35,0:35:1393:0:0:0,-10.536,-125.624 0/1:56:49,7:49:1937:7:265:-7.34902,0,-157.673 0/0:12:12,0:12:470:0:0:0,-3.61236,-42.6481 0/0:27:27,0:27:1035:0:0:0,-8.12781,-93.441 dDocent_Contig_11555 10 . T C 4178.79 . AB=0.210137;ABP=694.123;AC=5;AF=0.416667;AN=12;AO=199;CIGAR=1X1M1X1M;DP=947;DPB=947;DPRA=0;EPP=435.133;EPPR=1566.47;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=5.55112e-17;PAIRED=0.984925;PAIREDR=0.998611;PAO=0;PQA=0;PQR=0;PRO=0;QA=7534;QR=27693;RO=720;RPL=0;RPP=435.133;RPPR=1566.47;RPR=199;RUN=1;SAF=199;SAP=435.133;SAR=0;SRF=720;SRP=1566.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:173:91,82,0:91:3461:82,0:3082,0:-225.428,0,-259.511,-252.822,-284.196,-536.64 0|1:123:94,29,0:94:3653:29,0:1101,0:-62.3562,0,-291.814,-90.653,-300.544,-390.815 0|0:94:76,5,13:76:2902:5,13:175,504:-18.5472,-27.2029,-263.753,0,-223.859,-234.177 0|1:125:98,26,1:98:3778:26,1:967,40:-49.598,0,-302.353,-75.8029,-306.884,-385.706 0|1:267:232,35,0:232:8958:35,0:1378,0:-43.9106,0,-725.454,-113.75,-735.99,-849.347 0|1:165:129,22,14:129:4941:22,14:831,559:-29.2606,0,-398.811,-22.0443,-359.391,-423.282 dDocent_Contig_11556 65 . C T 179.485 . AB=0.214286;ABP=42.7172;AC=3;AF=0.25;AN=12;AO=15;CIGAR=1X;DP=132;DPB=132;DPRA=2.03846;EPP=35.5824;EPPR=257.073;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.991453;PAO=0;PQA=0;PQR=0;PRO=0;QA=528;QR=4355;RO=117;RPL=15;RPP=35.5824;RPPR=257.073;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=117;SRP=257.073;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:440:0:0:0,-3.61236,-39.9313 0/1:22:16,6:16:613:6:210:-12.6193,0,-48.8802 0/0:50:47,3:47:1750:3:107:0,-5.06968,-147.742 0/0:14:14,0:14:523:0:0:0,-4.21442,-47.4024 0/1:14:10,4:10:336:4:138:-8.54515,0,-26.3413 0/1:20:18,2:18:693:2:73:-0.910503,0,-56.6755 dDocent_Contig_11557 7 . G T 738.777 . AB=0.229412;ABP=111.124;AC=5;AF=0.416667;AN=12;AO=41;CIGAR=1X;DP=195;DPB=195;DPRA=0;EPP=92.0407;EPPR=333.074;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.853659;PAIREDR=0.842105;PAO=0;PQA=0;PQR=0;PRO=0;QA=1546;QR=4828;RO=152;RPL=0;RPP=92.0407;RPPR=333.074;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=152;SRP=333.074;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:25,7:25:742:7:269:-14.5702,0,-57.0501 0/1:46:34,12:34:1029:12:437:-25.8142,0,-79.0188 0/1:19:16,2:16:527:2:78:-1.62181,0,-41.966 0/1:31:22,9:22:758:9:351:-22.6199,0,-59.1918 0/1:41:32,9:32:1035:9:334:-18.0655,0,-81.0841 0/0:25:23,2:23:737:2:77:0,-0.216608,-59.308 dDocent_Contig_11558 7 . G A 7328.64 . AB=0.402047;ABP=60.0146;AC=6;AF=0.5;AN=12;AO=275;CIGAR=1X;DP=684;DPB=684;DPRA=0;EPP=600.165;EPPR=858.57;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997462;PAO=0;PQA=0;PQR=0;PRO=0;QA=10497;QR=12675;RO=394;RPL=0;RPP=600.165;RPPR=858.57;RPR=275;RUN=1;SAF=275;SAP=600.165;SAR=0;SRF=394;SRP=858.57;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:25,16:25:812:16:603:-42.1376,0,-60.9064 0/1:73:53,18:53:1770:18:697:-41.5535,0,-138.058 0/1:115:81,28:81:2533:28:1083:-64.7824,0,-195.212 0/1:48:37,9:37:1119:9:340:-16.9493,0,-86.9979 0/1:253:131,118:131:4211:118:4528:-332.431,0,-303.978 0/1:153:67,86:67:2230:86:3246:-246.232,0,-154.858 dDocent_Contig_11559 14 . T C 8023.25 . AB=0.0283019;ABP=412.722;AC=0;AF=0;AN=12;AO=6;CIGAR=1X1M1X3M1X;DP=476;DPB=476;DPRA=0;EPP=16.0391;EPPR=274.444;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.984;PAO=0;PQA=0;PQR=0;PRO=0;QA=240;QR=4934;RO=125;RPL=0;RPP=16.0391;RPPR=274.444;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=125;SRP=274.444;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:79:24,1,1,44,8:24:947:1,1,44,8:40,39,1743,293:-136.253,-140.183,-217.803,-140.272,-214.898,-217.892,0,-74.6383,-74.7278,-64.6884,-119.55,-194.174,-194.264,-54.0077,-195.061 0|0:100:31,0,1,56,12:31:1221:0,1,56,12:0,37,2192,481:-170.883,-180.215,-280.665,-177.188,-277.638,-277.337,0,-100.447,-97.4206,-83.5894,-140.584,-241.035,-238.008,-60.816,-237.423 0|0:65:29,1,0,29,6:29:1131:1,0,29,6:41,0,1144,242:-85.3842,-90.7296,-183.387,-94.1141,-183.688,-187.073,0,-89.5656,-92.9502,-84.2203,-74.1648,-163.74,-167.124,-73.0002,-165.318 0|0:68:6,4,12,32,14:6:240:4,12,32,14:159,477,1260,559:-128.111,-116.825,-135.392,-90.6439,-97.3236,-106.802,-26.266,-32.9457,-6.76485,-36.4038,-83.8794,-90.5592,-64.3775,0,-99.436 0|0:71:19,0,0,32,20:19:762:0,0,32,20:0,0,1263,800:-101.308,-107.028,-169.813,-107.028,-169.813,-169.813,-3.11031,-65.8952,-65.8952,-56.2622,-41.1303,-103.917,-103.917,0,-97.8963 0|0:93:16,0,0,58,19:16:633:0,0,58,19:0,0,2264,758:-191.608,-196.425,-248.518,-196.425,-248.518,-248.518,-10.335,-62.4265,-62.4265,-44.9667,-133.998,-186.092,-186.092,0,-180.372 dDocent_Contig_11560 28 . A G 2112.79 . AB=0.289655;ABP=114.459;AC=3;AF=0.3;AN=10;AO=84;CIGAR=1X;DP=531;DPB=531;DPRA=0.802213;EPP=185.414;EPPR=973.658;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0.952381;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3367;QR=17862;RO=447;RPL=0;RPP=185.414;RPPR=973.658;RPR=84;RUN=1;SAF=84;SAP=185.414;SAR=0;SRF=447;SRP=973.658;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:151:151,0:151:6033:0:0:0,-45.4555,-542.734 0/1:122:102,20:102:4085:20:805:-36.0424,0,-330.902 0/0:90:90,0:90:3605:0:0:0,-27.0927,-324.476 0/1:110:70,40:70:2787:40:1589:-110.129,0,-217.833 ./.:.:.:.:.:.:.:. 0/1:58:34,24:34:1352:24:973:-70.4084,0,-104.479 dDocent_Contig_11561 7 . G T 1038.33 . AB=0.0645161;ABP=54.0749;AC=0;AF=0;AN=12;AO=2;CIGAR=1X1M;DP=150;DPB=150;DPRA=0;EPP=7.35324;EPPR=207.129;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.808511;PAO=0;PQA=0;PQR=0;PRO=0;QA=22;QR=2961;RO=94;RPL=0;RPP=7.35324;RPPR=207.129;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=94;SRP=207.129;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:16:9,0,7,0:9:311:0,7,0:0,251,0:-18.1177,-20.827,-46.0861,0,-25.6117,-23.5045,-20.827,-46.0861,-25.6117,-46.0861 0|0:18:10,0,8,0:10:284:0,8,0:0,288,0:-20.8475,-23.8578,-46.3554,0,-22.8236,-20.4154,-23.8578,-46.3554,-22.8236,-46.3554 0|0:29:21,0,7,0:21:654:0,7,0:0,248,0:-13.8492,-20.1708,-72.6477,0,-52.4363,-50.329,-20.1708,-72.6477,-52.4363,-72.6477 0|0:31:22,0,7,2:22:755:0,7,2:0,226,22:-11.7656,-18.3882,-79.7228,0,-61.5002,-59.393,-17.0576,-78.3596,-60.1417,-77.7575 0|0:23:12,2,9,0:12:377:2,9,0:42,296,0:-20.4027,-20.8588,-50.5526,0,-27.2304,-27.6841,-24.0151,-51.1546,-30.3934,-54.3229 0|0:33:20,0,13,0:20:580:0,13,0:0,441,0:-30.0716,-36.0922,-82.2222,0,-46.4497,-42.5363,-36.0922,-82.2222,-46.4497,-82.2222 dDocent_Contig_11562 7 . G A 218.921 . AB=0.321429;ABP=10.7656;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=158;DPB=158;DPRA=1.07692;EPP=22.5536;EPPR=320.045;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.888889;PAIREDR=0.856164;PAO=0;PQA=0;PQR=0;PRO=0;QA=348;QR=4754;RO=146;RPL=0;RPP=22.5536;RPPR=320.045;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=146;SRP=320.045;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:22,0:22:697:0:0:0,-6.62266,-62.8926 0/1:28:18,9:18:637:9:348:-23.415,0,-49.4003 0/0:34:34,0:34:1119:0:0:0,-10.235,-100.98 0/0:33:32,0:32:1038:0:0:0,-9.63296,-93.522 0/0:16:16,0:16:524:0:0:0,-4.81648,-47.4638 0/0:24:24,0:24:739:0:0:0,-7.22472,-66.784 dDocent_Contig_11563 10 . C T 329.903 . AB=0.193548;ABP=78.8717;AC=1;AF=0.0833333;AN=12;AO=27;CIGAR=1X;DP=798;DPB=798;DPRA=0.983271;EPP=61.6401;EPPR=1677.22;GTI=0;LEN=1;MEANALT=1;MQM=59.6667;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.962963;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1007;QR=29095;RO=771;RPL=0;RPP=61.6401;RPPR=1677.22;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=771;SRP=1677.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:202:202,0:202:7560:0:0:0,-60.8081,-680.156 0/0:141:139,2:139:5224:2:80:0,-34.8537,-462.514 0/0:67:67,0:67:2584:0:0:0,-20.169,-232.712 0/0:157:153,4:153:5754:4:121:0,-36.0753,-506.56 0/0:138:135,3:135:5191:3:115:0,-30.8171,-456.376 0/1:93:75,18:75:2782:18:691:-34.5132,0,-222.522 dDocent_Contig_11564 109 . A T 641.093 . AB=0.47541;ABP=3.33068;AC=1;AF=0.0833333;AN=12;AO=29;CIGAR=1X;DP=208;DPB=208;DPRA=2.07483;EPP=65.983;EPPR=391.704;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=930;QR=5897;RO=179;RPL=0;RPP=65.983;RPPR=391.704;RPR=29;RUN=1;SAF=0;SAP=65.983;SAR=29;SRF=0;SRP=391.704;SRR=179;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:462:0:0:0,-4.21442,-41.8973 0/0:64:64,0:64:2087:0:0:0,-19.2659,-188.099 0/0:36:36,0:36:1200:0:0:0,-10.8371,-108.299 0/0:31:31,0:31:1021:0:0:0,-9.33193,-92.1906 0/1:61:32,29:32:1057:29:930:-65.632,0,-77.0663 0/0:2:2,0:2:70:0:0:0,-0.60206,-6.6474 dDocent_Contig_11565 7 . G A 105.43 . AB=0.116071;ABP=146.405;AC=1;AF=0.0833333;AN=12;AO=22;CIGAR=1X;DP=309;DPB=309;DPRA=2.47115;EPP=50.7827;EPPR=608.851;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=841;QR=8922;RO=279;RPL=0;RPP=50.7827;RPPR=608.851;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=279;SRP=608.851;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:53:49,3:49:1478:3:117:0,-4.96809,-122.411 0/1:112:96,13:96:3084:13:497:-12.0659,0,-244.768 0/0:43:41,0:41:1406:0:0:0,-12.3422,-126.687 0/0:62:56,4:56:1765:4:151:0,-4.33058,-145.198 0/0:30:28,2:28:887:2:76:0,-1.81623,-72.891 0/0:9:9,0:9:302:0:0:0,-2.70927,-27.5002 dDocent_Contig_11566 16 . G A 95.1333 . AB=0.152174;ABP=51.3492;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=1X;DP=125;DPB=125;DPRA=1.16456;EPP=18.2106;EPPR=259.244;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=286;QR=4679;RO=118;RPL=0;RPP=18.2106;RPPR=259.244;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=118;SRP=259.244;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:13:13,0:13:523:0:0:0,-3.91339,-47.416 0/0:12:12,0:12:473:0:0:0,-3.61236,-42.9173 0/0:34:34,0:34:1328:0:0:0,-10.235,-119.776 0/0:20:20,0:20:806:0:0:0,-6.0206,-72.8553 0/1:19:17,2:17:672:2:82:-2.06011,0,-55.0893 0/1:27:22,5:22:877:5:204:-10.6162,0,-71.1096 dDocent_Contig_11567 70 . G T 98.8971 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=106;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:106:-9.88916,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11568 16 . G C 280.197 . AB=0.818182;ABP=12.6832;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=530;DPB=530;DPRA=0.105973;EPP=22.5536;EPPR=1117.04;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992322;PAO=0;PQA=0;PQR=0;PRO=0;QA=361;QR=20743;RO=521;RPL=0;RPP=22.5536;RPPR=1134.35;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=519;SRP=1117.04;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:2:2,0:2:82:0:0:0,-0.60206,-7.77968 0/1:11:2,9:2:72:9:361:-29.5402,0,-3.52299 0/0:10:10,0:10:391:0:0:0,-3.0103,-35.5475 0/0:12:12,0:12:476:0:0:0,-3.61236,-43.1868 0/0:221:221,0:221:8807:0:0:0,-66.5276,-792.13 0/0:274:274,0:274:10915:0:0:0,-82.4822,-981.622 dDocent_Contig_11569 39 . C T 1948.11 . AB=0.365;ABP=34.6704;AC=6;AF=0.5;AN=12;AO=73;CIGAR=1X;DP=200;DPB=200;DPRA=0;EPP=161.528;EPPR=278.787;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.986301;PAIREDR=0.96063;PAO=0;PQA=0;PQR=0;PRO=0;QA=2935;QR=5078;RO=127;RPL=0;RPP=161.528;RPPR=278.787;RPR=73;RUN=1;SAF=73;SAP=161.528;SAR=0;SRF=127;SRP=278.787;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:23,18:23:930:18:729:-53.5927,0,-71.6609 0/1:44:29,15:29:1147:15:610:-41.9919,0,-90.2611 0/1:47:29,18:29:1144:18:720:-50.9751,0,-89.0898 0/1:34:18,16:18:729:16:641:-47.7891,0,-55.6988 0/1:11:9,2:9:364:2:81:-4.3744,0,-29.8131 0/1:23:19,4:19:764:4:154:-7.30973,0,-62.1526 dDocent_Contig_11570 71 . T G 159.032 . AB=0.257143;ABP=20.9405;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=99;DPB=99;DPRA=2.73438;EPP=22.5536;EPPR=198.443;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=307;QR=3095;RO=90;RPL=9;RPP=22.5536;RPPR=198.443;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=90;SRP=198.443;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:6:6,0:6:200:0:0:0,-1.80618,-18.3272 0/0:1:1,0:1:35:0:0:0,-0.30103,-3.49863 0/0:17:17,0:17:589:0:0:0,-5.11751,-53.3365 0/1:35:26,9:26:880:9:307:-17.4257,0,-68.973 0/0:13:13,0:13:454:0:0:0,-3.91339,-41.1933 0/0:27:27,0:27:937:0:0:0,-8.12781,-84.6449 dDocent_Contig_11571 165 . A G 3618.22 . AB=0.661017;ABP=42.8697;AC=4;AF=0.4;AN=10;AO=117;CIGAR=1X;DP=179;DPB=179;DPRA=22.125;EPP=257.073;EPPR=137.642;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4681;QR=2459;RO=62;RPL=117;RPP=257.073;RPPR=137.642;RPR=0;RUN=1;SAF=0;SAP=257.073;SAR=117;SRF=0;SRP=137.642;SRR=62;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:8,15:8:313:15:599:-47.3247,0,-21.6075 0/1:62:13,49:13:522:49:1959:-157.844,0,-28.663 0/1:66:24,42:24:957:42:1680:-131.556,0,-66.5633 0/1:26:15,11:15:589:11:443:-32.3983,0,-45.5166 ./.:.:.:.:.:.:.:. 0/0:2:2,0:2:78:0:0:0,-0.60206,-7.40278 dDocent_Contig_11572 63 . G T 64.8649 . AB=0.11215;ABP=142.817;AC=1;AF=0.125;AN=8;AO=12;CIGAR=1X;DP=407;DPB=407;DPRA=1.07;EPP=29.068;EPPR=860.742;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.987342;PAO=0;PQA=0;PQR=0;PRO=0;QA=445;QR=14326;RO=395;RPL=12;RPP=29.068;RPPR=860.742;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=395;SRP=860.742;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:137:137,0:137:4895:0:0:0,-41.2411,-440.681 0/0:116:116,0:116:4138:0:0:0,-34.9195,-372.583 0/0:47:47,0:47:1790:0:0:0,-14.1484,-161.355 0/1:107:95,12:95:3503:12:445:-8.18546,0,-283.199 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11573 72 . A T 71.6409 . AB=0.135593;ABP=71.062;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=389;DPB=389;DPRA=1.26891;EPP=24.725;EPPR=821.655;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.501326;PAO=0;PQA=0;PQR=0;PRO=0;QA=358;QR=13185;RO=377;RPL=4;RPP=3.87889;RPPR=35.4096;RPR=6;RUN=1;SAF=4;SAP=3.87889;SAR=6;SRF=226;SRP=35.4096;SRR=151;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:53:53,0:53:1866:0:0:0,-15.9546,-168.213 0/0:92:89,2:89:3112:2:68:0,-21.1024,-273.918 0/0:34:34,0:34:1192:0:0:0,-10.235,-107.578 0/1:59:51,8:51:1775:8:290:-8.68697,0,-142.251 0/0:69:69,0:69:2438:0:0:0,-20.7711,-219.658 0/0:82:81,0:81:2802:0:0:0,-24.3834,-252.034 dDocent_Contig_11575 94 . A G 79.2619 . AB=0.363636;ABP=4.78696;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=290;DPB=290;DPRA=1.41176;EPP=31.2394;EPPR=604.508;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=445;QR=9369;RO=277;RPL=13;RPP=31.2394;RPPR=604.508;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=277;SRP=604.508;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:663:0:0:0,-5.71957,-59.9958 0/0:47:47,0:47:1595:0:0:0,-14.1484,-143.84 0/0:77:77,0:77:2607:0:0:0,-23.1793,-234.887 0/0:27:27,0:27:869:0:0:0,-8.12781,-78.5051 0/1:11:7,4:7:241:4:138:-9.44907,0,-18.7151 0/0:109:100,9:100:3394:9:307:0,-4.85072,-277.731 dDocent_Contig_11576 97 . A T 101.187 . AB=0.153846;ABP=70.66;AC=3;AF=0.25;AN=12;AO=15;CIGAR=1X;DP=127;DPB=127;DPRA=0;EPP=35.5824;EPPR=246.215;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.466667;PAIREDR=0.669643;PAO=0;PQA=0;PQR=0;PRO=0;QA=524;QR=3776;RO=112;RPL=15;RPP=35.5824;RPPR=246.215;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=112;SRP=246.215;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:11:10,1:10:345:1:36:-0.286945,0,-28.0725 0/1:32:26,6:26:872:6:213:-9.88353,0,-69.1548 0/0:27:25,2:25:845:2:70:0,-1.48048,-69.7153 0/1:22:19,3:19:639:3:108:-3.45251,0,-51.2045 0/0:15:14,1:14:465:1:36:0,-0.917175,-38.57 0/0:20:18,2:18:610:2:61:0,-0.227369,-49.4268 dDocent_Contig_11577 13 . T C 606.142 . AB=0.44898;ABP=4.11819;AC=3;AF=0.25;AN=12;AO=23;CIGAR=1X;DP=93;DPB=93;DPRA=1.05;EPP=52.9542;EPPR=155.013;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.782609;PAIREDR=0.771429;PAO=0;PQA=0;PQR=0;PRO=0;QA=923;QR=2770;RO=70;RPL=0;RPP=52.9542;RPPR=155.013;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=70;SRP=155.013;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:13,1:13:511:1:40:0,-0.218741,-42.3389 0/1:10:8,2:8:325:2:79:-4.48733,0,-26.6093 0/1:25:7,18:7:279:18:722:-57.7809,0,-17.955 0/1:14:12,2:12:485:2:82:-3.56526,0,-39.7863 0/0:9:9,0:9:356:0:0:0,-2.70927,-32.3997 0/0:21:21,0:21:814:0:0:0,-6.32163,-73.5754 dDocent_Contig_11578 14 . G A 213.57 . AB=0.178082;ABP=68.7196;AC=3;AF=0.25;AN=12;AO=15;CIGAR=1X;DP=137;DPB=137;DPRA=1.35135;EPP=35.5824;EPPR=267.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.133333;PAIREDR=0.344262;PAO=0;PQA=0;PQR=0;PRO=0;QA=592;QR=4793;RO=122;RPL=0;RPP=35.5824;RPPR=267.93;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=122;SRP=267.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:21,2:21:844:2:81:-0.762044,0,-69.3505 0/1:26:22,4:22:880:4:161:-7.04812,0,-71.6848 0/0:18:18,0:18:714:0:0:0,-5.41854,-64.5871 0/0:27:25,2:25:1003:2:79:0,-0.630565,-83.0703 0/1:24:17,7:17:624:7:271:-17.5264,0,-49.2557 0/0:19:19,0:19:728:0:0:0,-5.71957,-65.8346 dDocent_Contig_11579 70 . G A 250.118 . AB=0.146667;ABP=84.3392;AC=4;AF=0.333333;AN=12;AO=17;CIGAR=1X;DP=141;DPB=141;DPRA=2.11111;EPP=39.9253;EPPR=272.273;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=588;QR=4210;RO=124;RPL=17;RPP=39.9253;RPPR=272.273;RPR=0;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=124;SRP=272.273;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:2:1,1:1:35:1:36:-2.99621,0,-2.89657 0/1:73:63,10:63:2141:10:349:-9.77112,0,-170.989 0/0:20:20,0:20:676:0:0:0,-6.0206,-61.1573 0/0:7:7,0:7:233:0:0:0,-2.10721,-21.2959 0/0:34:33,1:33:1125:1:35:0,-6.73639,-98.0579 1/1:5:0,5:0:0:5:168:-15.4501,-1.50515,0 dDocent_Contig_11580 7 . G C 2167.65 . AB=0.478788;ABP=3.65516;AC=6;AF=0.5;AN=12;AO=79;CIGAR=1X;DP=165;DPB=165;DPRA=0;EPP=174.557;EPPR=185.414;GTI=0;LEN=1;MEANALT=1.33333;MQM=59.7975;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.670886;PAIREDR=0.702381;PAO=0;PQA=0;PQR=0;PRO=0;QA=3062;QR=2638;RO=84;RPL=0;RPP=174.557;RPPR=185.414;RPR=79;RUN=1;SAF=79;SAP=174.557;SAR=0;SRF=84;SRP=185.414;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:12,9:12:407:9:348:-25.3587,0,-30.6269 0/1:22:16,6:16:489:6:232:-14.6263,0,-37.6709 0/1:25:17,7:17:572:7:273:-17.4021,0,-44.2557 0/1:37:23,14:23:686:14:542:-37.9877,0,-50.869 0/1:26:5,21:5:164:21:813:-65.6674,0,-7.24974 0/1:34:11,22:11:320:22:854:-66.9448,0,-18.9449 dDocent_Contig_11581 107 . N T 1318.46 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=47;CIGAR=1X;DP=47;DPB=47;DPRA=0;EPP=105.07;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0.93617;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1445;QR=0;RO=0;RPL=0;RPP=105.07;RPPR=0;RPR=47;RUN=1;SAF=0;SAP=105.07;SAR=47;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:10:0,10:0:0:10:322:-29.2943,-3.0103,0 1/1:11:0,11:0:0:11:366:-33.2623,-3.31133,0 1/1:10:0,10:0:0:10:268:-24.3832,-3.0103,0 1/1:16:0,16:0:0:16:489:-44.3042,-4.81648,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11582 14 . C T 42.1969 . AB=0.111111;ABP=97.59;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=210;DPB=210;DPRA=1.09091;EPP=31.2394;EPPR=430.79;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.923077;PAIREDR=0.807107;PAO=0;PQA=0;PQR=0;PRO=0;QA=516;QR=7921;RO=197;RPL=0;RPP=31.2394;RPPR=430.79;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=197;SRP=430.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:30,2:30:1221:2:79:0,-2.13572,-102.661 0/0:40:37,3:37:1492:3:122:0,-0.668707,-123.151 0/1:39:35,4:35:1409:4:159:-2.95066,0,-115.322 0/1:33:29,4:29:1161:4:156:-4.48242,0,-94.8288 0/0:31:31,0:31:1236:0:0:0,-9.33193,-111.51 0/0:35:35,0:35:1402:0:0:0,-10.536,-126.432 dDocent_Contig_11584 7 . G A 31.9422 . AB=0.102941;ABP=96.1281;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=293;DPB=293;DPRA=1.34857;EPP=24.725;EPPR=602.337;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=386;QR=9035;RO=276;RPL=0;RPP=24.725;RPPR=602.337;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=276;SRP=602.337;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:52,0:52:1683:0:0:0,-15.6536,-151.596 0/0:48:46,0:46:1561:0:0:0,-13.8474,-140.634 0/0:34:34,0:34:1029:0:0:0,-10.235,-92.8659 0/0:39:39,0:39:1265:0:0:0,-11.7402,-114.117 0/1:68:59,7:59:1984:7:271:-4.71682,0,-158.815 0/0:50:46,3:46:1513:3:115:0,-4.26383,-125.751 dDocent_Contig_11585 7 . G A 549.187 . AB=0.138298;ABP=109.828;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X5M;DP=177;DPB=177;DPRA=0.559524;EPP=31.2394;EPPR=248.387;GTI=0;LEN=1;MEANALT=4.5;MQM=60;MQMR=58.9469;NS=6;NUMALT=6;ODDS=0;PAIRED=0.923077;PAIREDR=0.823009;PAO=0;PQA=0;PQR=0;PRO=0;QA=499;QR=3946;RO=113;RPL=0;RPP=31.2394;RPPR=248.387;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=113;SRP=248.387;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:31:23,1,0,4,2,0,0:23:784:1,0,4,2,0,0:38,0,154,69,0,0:-5.76587,-9.56734,-72.8005,-12.6896,-73.1016,-76.2194,0,-60.4499,-63.5681,-62.364,-7.08213,-67.4954,-70.6133,-57.9615,-70.0113,-12.6896,-73.1016,-76.2194,-63.5681,-70.6133,-76.2194,-12.6896,-73.1016,-76.2194,-63.5681,-70.6133,-76.2194,-76.2194 0|0:41:27,2,0,0,6,2,2:27:937:2,0,0,6,2,2:76,0,0,229,57,78:-10.6747,-12.5664,-88.1136,-18.8025,-88.7157,-94.9502,-18.8025,-88.7157,-94.9502,-94.9502,0,-69.9227,-76.1577,-76.1577,-74.3515,-14.2912,-84.1952,-90.4296,-90.4296,-71.6374,-89.8275,-12.3862,-82.302,-88.5366,-88.5366,-69.7435,-84.0161,-87.9346 0|0:27:16,3,1,1,3,0,3:16:575:3,1,1,3,0,3:116,29,39,114,0,122:-5.20221,-0.488393,-46.4735,-7.71912,-45.0713,-54.3005,-6.81194,-44.1697,-51.3949,-53.3994,-0.669739,-38.0252,-45.251,-44.3494,-46.6532,-10.0187,-47.3766,-54.6015,-53.7005,-47.5563,-56.9072,0,-37.3612,-44.5872,-43.6857,-37.541,-46.8927,-45.9896 0|0:42:36,2,0,0,3,0,0:36:1287:2,0,0,3,0,0:71,0,0,85,0,0:0,-5.02611,-109.403,-10.8371,-110.005,-115.791,-10.8371,-110.005,-115.791,-115.791,-4.1136,-103.267,-109.053,-109.053,-108.149,-10.8371,-110.005,-115.791,-115.791,-109.053,-115.791,-10.8371,-110.005,-115.791,-115.791,-109.053,-115.791,-115.791 0|1:14:5,0,0,6,0,2,0:5:156:0,0,6,0,2,0:0,0,230,0,69,0:-17.3853,-18.8904,-29.5524,-18.8904,-29.5524,-29.5524,0,-10.6421,-10.6421,-8.83594,-18.8904,-29.5524,-29.5524,-10.6421,-29.5524,-13.295,-23.9469,-23.9469,-5.02461,-23.9469,-23.3449,-18.8904,-29.5524,-29.5524,-10.6421,-29.5524,-23.9469,-29.5524 0|0:22:6,1,2,2,9,0,0:6:207:1,2,2,9,0,0:39,73,76,329,0,0:-25.075,-23.6737,-40.1816,-21.3956,-34.9953,-37.6006,-20.6462,-34.2475,-31.9678,-36.853,0,-13.5962,-11.3187,-10.5677,-14.0957,-26.8812,-40.4826,-38.2026,-37.455,-16.8049,-43.6899,-26.8812,-40.4826,-38.2026,-37.455,-16.8049,-43.6899,-43.6899 dDocent_Contig_11586 132 . A G 658.747 . AB=0.46875;ABP=3.55317;AC=4;AF=0.333333;AN=12;AO=30;CIGAR=2X2M1X;DP=91;DPB=91;DPRA=1.18519;EPP=68.1545;EPPR=135.47;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1012;QR=2057;RO=61;RPL=0;RPP=68.1545;RPPR=135.47;RPR=30;RUN=1;SAF=0;SAP=68.1545;SAR=30;SRF=0;SRP=135.47;SRR=61;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:9:5,4:5:165:4:133:-9.58917,0,-12.4664 0|1:9:6,3:6:197:3:84:-5.12909,0,-15.343 0|0:18:18,0:18:603:0:0:0,-5.41854,-54.5873 0|1:34:13,21:13:440:21:725:-55.3366,0,-29.69 0|0:9:9,0:9:306:0:0:0,-2.70927,-27.8708 0|1:12:10,2:10:346:2:70:-3.03504,0,-27.8622 dDocent_Contig_11587 12 . T G 9181.66 . AB=0.568058;ABP=25.1782;AC=6;AF=0.5;AN=12;AO=313;CIGAR=1X;DP=551;DPB=551;DPRA=0;EPP=682.681;EPPR=519.821;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995798;PAO=0;PQA=0;PQR=0;PRO=0;QA=12155;QR=9272;RO=238;RPL=0;RPP=682.681;RPPR=519.821;RPR=313;RUN=1;SAF=313;SAP=682.681;SAR=0;SRF=238;SRP=519.821;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:108:61,47:61:2401:47:1855:-134.658,0,-183.751 0/1:113:64,49:64:2491:49:1896:-136.836,0,-190.334 0/1:106:34,72:34:1324:72:2751:-215.818,0,-87.5174 0/1:130:56,74:56:2165:74:2861:-218.49,0,-155.904 0/1:17:2,15:2:75:15:603:-49.4906,0,-2.00283 0/1:77:21,56:21:816:56:2189:-174.029,0,-50.5731 dDocent_Contig_11588 12 . T C 145.461 . AB=0.833333;ABP=8.80089;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=196;DPB=196;DPRA=0.157895;EPP=13.8677;EPPR=417.762;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=194;QR=7442;RO=191;RPL=0;RPP=13.8677;RPPR=417.762;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=191;SRP=417.762;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:48,0:48:1847:0:0:0,-14.4494,-166.457 0/0:65:65,0:65:2592:0:0:0,-19.5669,-233.418 0/0:43:43,0:43:1675:0:0:0,-12.9443,-150.989 0/0:32:32,0:32:1207:0:0:0,-9.63296,-108.908 0/1:6:1,5:1:40:5:194:-16.0243,0,-2.1895 0/0:2:2,0:2:81:0:0:0,-0.60206,-7.68573 dDocent_Contig_11589 46 . T C 199.012 . AB=0.15;ABP=66.8516;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=2X;DP=199;DPB=199;DPRA=1.71429;EPP=22.5536;EPPR=402.561;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.98913;PAO=0;PQA=0;PQR=0;PRO=0;QA=338;QR=7236;RO=184;RPL=0;RPP=22.5536;RPPR=402.561;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=184;SRP=402.561;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:17:14,0,3:14:539:0,3:0,121:-6.16269,-10.3771,-54.6104,0,-44.6329,-43.7298 0|0:12:12,0,0:12:474:0,0:0,0:0,-3.61236,-43.0109,-3.61236,-43.0109,-43.0109 0|0:17:14,0,3:14:551:0,3:0,122:-6.25498,-10.4694,-55.7823,0,-45.7167,-44.8136 0|0:22:22,0,0:22:861:0,0:0,0:0,-6.62266,-77.796,-6.62266,-77.796,-77.796 0|0:71:71,0,0:71:2797:0,0:0,0:0,-21.3731,-251.855,-21.3731,-251.855,-251.855 0|1:60:51,9,0:51:2014:9,0:338,0:-12.7054,0,-163.402,-28.0579,-166.111,-193.791 dDocent_Contig_11590 27 . C T 4635.21 . AB=0.0649351;ABP=129.604;AC=4;AF=0.333333;AN=12;AO=5;CIGAR=1X1M1D3M2X3M1I4M;DP=237;DPB=237;DPRA=0.48125;EPP=13.8677;EPPR=87.6977;GTI=0;LEN=1;MEANALT=5;MQM=53.6;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0.8;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=192;QR=1500;RO=39;RPL=0;RPP=13.8677;RPPR=87.6977;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=39;SRP=87.6977;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:7:6,0,1,0,0:6:229:0,1,0,0:0,40,0,0:-1.86622,-3.6724,-22.4438,0,-19.1664,-18.8654,-3.6724,-22.4438,-19.1664,-22.4438,-3.6724,-22.4438,-19.1664,-22.4438,-22.4438 0|1:62:15,4,32,1,7:15:587:4,32,1,7:52,1198,38,261:-92.5518,-94.6537,-141.718,0,-45.9183,-38.6853,-94.0551,-139.911,-45.3055,-142.028,-75.6981,-121.558,-26.9429,-120.963,-121.867 0|1:15:8,0,2,4,0:8:301:0,2,4,0:0,62,154,0:-10.175,-12.5833,-37.2579,-8.17472,-32.8344,-32.2323,0,-24.711,-20.2917,-23.5069,-12.5833,-37.2579,-32.8344,-24.711,-37.2579 1|0:14:1,0,10,0,2:1:39:0,10,0,2:0,399,0,68:-34.9539,-35.2549,-38.462,-2.31014,-5.54095,-2.53065,-35.2549,-38.462,-5.54095,-38.462,-29.7451,-32.9518,0,-32.9518,-32.3498 0|0:59:6,0,2,0,49:6:225:0,2,0,49:0,78,0,1890:-153.384,-155.19,-173.614,-149.047,-167.471,-166.869,-155.19,-173.614,-167.471,-173.614,0,-18.4175,-12.2756,-18.4175,-3.66705 0|0:80:3,19,3,0,55:3:119:19,3,0,55:266,118,0,2115:-179.607,-167.356,-171.433,-170.807,-167.452,-179.703,-180.511,-177.153,-180.606,-190.31,-6.73096,-3.55015,-6.82708,-16.5567,0 dDocent_Contig_11592 17 . G T 95.0884 . AB=0.777778;ABP=9.04217;AC=1;AF=0.1;AN=10;AO=36;CIGAR=1X;DP=254;DPB=254;DPRA=0;EPP=81.1833;EPPR=474.22;GTI=0;LEN=1;MEANALT=1.2;MQM=17.9167;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1420;QR=8607;RO=217;RPL=0;RPP=81.1833;RPPR=474.22;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=217;SRP=474.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:35,3:35:1412:3:121:0,-6.30205,-121.795 0/0:106:98,8:98:3894:8:311:0,-20.3607,-338.914 0/0:35:29,6:29:1169:6:237:0,-2.12486,-97.0772 0/0:65:53,12:53:2061:12:477:0,-0.101931,-166.222 ./.:.:.:.:.:.:.:. 0/1:9:2,7:2:71:7:274:-11.1094,0,-4.03016 dDocent_Contig_11593 31 . G A 43.567 . AB=0.333333;ABP=4.45795;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=1X;DP=137;DPB=137;DPRA=0.229008;EPP=7.35324;EPPR=296.159;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.518519;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=5348;RO=135;RPL=0;RPP=7.35324;RPPR=296.159;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=135;SRP=296.159;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:921:0:0:0,-6.92369,-83.1971 0/0:40:40,0:40:1580:0:0:0,-12.0412,-142.443 0/0:9:9,0:9:356:0:0:0,-2.70927,-32.3992 0/0:48:48,0:48:1896:0:0:0,-14.4494,-170.848 0/1:6:4,2:4:156:2:81:-5.87955,0,-12.6104 0/0:11:11,0:11:439:0:0:0,-3.31133,-39.8645 dDocent_Contig_11594 23 . G C 5200.68 . AB=0.630597;ABP=42.7126;AC=6;AF=0.5;AN=12;AO=169;CIGAR=1X;DP=268;DPB=268;DPRA=0;EPP=369.989;EPPR=217.986;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.857988;PAIREDR=0.888889;PAO=0;PQA=0;PQR=0;PRO=0;QA=6781;QR=3943;RO=99;RPL=0;RPP=369.989;RPPR=217.986;RPR=169;RUN=1;SAF=169;SAP=369.989;SAR=0;SRF=99;SRP=217.986;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:7,28:7:285:28:1119:-90.4551,0,-15.4884 0/1:46:13,33:13:506:33:1316:-104.857,0,-32.0384 0/1:46:19,27:19:765:27:1072:-82.9187,0,-55.324 0/1:66:10,56:10:392:56:2265:-184.135,0,-15.7654 0/1:30:21,9:21:853:9:358:-23.5478,0,-68.0495 0/1:45:29,16:29:1142:16:651:-45.3766,0,-89.5158 dDocent_Contig_11595 10 . A T 832.224 . AB=0.203774;ABP=204.99;AC=4;AF=0.333333;AN=12;AO=56;CIGAR=2M1X;DP=367;DPB=367;DPRA=1.39565;EPP=124.613;EPPR=678.338;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.767857;PAIREDR=0.636656;PAO=0;PQA=0;PQR=0;PRO=0;QA=1935;QR=11067;RO=311;RPL=0;RPP=124.613;RPPR=678.338;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=311;SRP=678.338;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:58:45,13:45:1646:13:453:-23.632,0,-130.944 0|1:74:62,12:62:2223:12:436:-17.2953,0,-178.031 0|1:57:39,18:39:1400:18:597:-36.874,0,-109.116 0|1:76:65,11:65:2248:11:391:-12.6429,0,-179.675 0|0:46:46,0:46:1622:0:0:0,-13.8474,-146.248 0|0:56:54,2:54:1928:2:58:0,-11.3518,-168.267 dDocent_Contig_11596 7 . G C 1589.36 . AB=0.0588235;ABP=60.4905;AC=0;AF=0;AN=10;AO=2;CIGAR=1X1M1D1X2M1X2M2X1M;DP=105;DPB=100.083;DPRA=3.57895;EPP=7.35324;EPPR=96.3836;GTI=0;LEN=1;MEANALT=3;MQM=10;MQMR=60;NS=5;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.976744;PAO=0;PQA=0;PQR=0;PRO=0;QA=20;QR=1584;RO=43;RPL=0;RPP=7.35324;RPPR=96.3836;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=43;SRP=96.3836;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:25:11,0,14:11:416:0,14:0,532:-40.6854,-43.9967,-78.0969,0,-34.4788,-30.2644 0|0:13:1,0,10:1:36:0,10:0,360:-29.2222,-29.5233,-32.4629,-0.0162697,-3.0103,0 .:.:.:.:.:.:.:. 0|0:6:6,0,0:6:209:0,0:0,0:0,-1.80618,-19.1462,-1.80618,-19.1462,-19.1462 0|0:27:11,0,14:11:424:0,14:0,550:-42.1725,-45.4839,-80.313,0,-35.0505,-30.8361 0|0:34:14,2,17:14:499:2,17:20,681:-52.1562,-55.7057,-95.7618,0,-40.2292,-35.7764 dDocent_Contig_11598 7 . G A 6264.5 . AB=0.0856354;ABP=542.879;AC=0;AF=0;AN=12;AO=31;CIGAR=1X2M3I18M;DP=962;DPB=1047.48;DPRA=0;EPP=70.3259;EPPR=565.422;GTI=0;LEN=1;MEANALT=19;MQM=60;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=1;PAIREDR=0.996139;PAO=0.1;PQA=1.9;PQR=1.9;PRO=0.1;QA=1173;QR=9757;RO=259;RPL=0;RPP=70.3259;RPPR=565.422;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=259;SRP=565.422;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:89:22,0,6,5,25,4,10,0,0,2:22:824:0,6,5,25,4,10,0,0,2:0,215,173,895,126,361,0,0,77:-66.3558,-72.9785,-140.467,-55.4462,-122.935,-121.129,-58.9233,-126.412,-108.88,-124.907,0,-67.4917,-49.96,-53.437,-59.966,-62.8517,-130.34,-112.808,-116.285,-57.3654,-129.136,-43.5157,-111.005,-93.4736,-96.9504,-38.0299,-100.878,-107.995,-72.9785,-140.467,-122.935,-126.412,-67.4917,-130.34,-111.005,-140.467,-72.9785,-140.467,-122.935,-126.412,-67.4917,-130.34,-111.005,-140.467,-140.467,-66.6551,-134.144,-116.612,-120.089,-61.1685,-124.017,-104.682,-134.144,-134.144,-133.542 0|0:222:56,29,4,19,43,5,27,0,0,0:56:2076:29,4,19,43,5,27,0,0,0:1111,154,679,1492,188,981,0,0,0:-104.391,-30.0634,-191.195,-108.604,-187.28,-277.259,-65.9011,-144.577,-223.116,-230.041,0,-78.6755,-157.215,-114.512,-156.915,-105.845,-184.521,-263.059,-220.356,-154.455,-274.199,-41.1371,-119.813,-198.352,-155.649,-89.7487,-195.593,-202.869,-121.249,-199.925,-278.463,-235.76,-169.859,-275.704,-210.997,-291.108,-121.249,-199.925,-278.463,-235.76,-169.859,-275.704,-210.997,-291.108,-291.108,-121.249,-199.925,-278.463,-235.76,-169.859,-275.704,-210.997,-291.108,-291.108,-291.108 0|0:152:79,0,4,0,19,1,3,2,5,0:79:2983:0,4,0,19,1,3,2,5,0:0,147,0,636,37,97,69,176,0:-27.7067,-51.4881,-295.988,-39.4717,-283.973,-282.769,-51.4881,-295.988,-283.973,-295.988,0,-244.502,-232.487,-244.502,-238.782,-48.4607,-292.961,-280.946,-292.961,-241.475,-292.66,-43.6681,-288.168,-276.153,-288.168,-236.682,-285.141,-287.265,-45.8822,-290.383,-278.368,-290.383,-238.896,-287.355,-282.563,-289.78,-37.1598,-281.661,-269.646,-281.661,-230.175,-278.634,-273.841,-276.055,-280.156,-51.4881,-295.988,-283.973,-295.988,-244.502,-292.961,-288.168,-290.383,-281.661,-295.988 0|0:140:34,2,0,6,30,5,35,1,0,10:34:1282:2,0,6,30,5,35,1,0,10:62,0,181,1108,188,1192,27,0,325:-86.4494,-91.7079,-196.175,-96.6844,-196.777,-201.753,-82.2087,-182.301,-187.278,-185.472,-6.0479,-106.148,-111.125,-96.6491,-102.094,-81.2787,-181.372,-186.349,-171.873,-95.7192,-184.844,0,-100.098,-105.074,-90.5993,-14.4422,-89.6691,-94.5382,-94.5562,-194.649,-199.625,-185.15,-108.996,-184.22,-102.946,-199.324,-96.6844,-196.777,-201.753,-187.278,-111.125,-186.349,-105.074,-199.625,-201.753,-70.4593,-170.553,-175.529,-161.054,-84.8999,-160.124,-78.8504,-173.401,-175.529,-172.519 0|0:123:4,0,0,0,31,11,7,2,37,0:4:149:0,0,0,31,11,7,2,37,0:0,0,0,1000,396,244,56,1223,0:-166.102,-167.306,-179.505,-167.306,-179.505,-179.505,-167.306,-179.505,-179.505,-179.505,-86.6845,-98.884,-98.884,-98.884,-89.5521,-134.994,-147.194,-147.194,-147.194,-66.5716,-143.882,-147.461,-159.66,-159.66,-159.66,-79.0385,-127.348,-157.553,-162.872,-175.07,-175.07,-175.07,-94.4501,-142.76,-155.226,-174.468,-68.4235,-80.6234,-80.6234,-80.6234,0,-48.31,-60.7774,-76.1894,-69.4853,-167.306,-179.505,-179.505,-179.505,-98.884,-147.194,-159.66,-175.07,-80.6234,-179.505 0|0:236:64,0,0,0,39,3,1,16,74,0:64:2443:0,0,0,39,3,1,16,74,0:0,0,0,1337,110,35,554,2537,0:-186.667,-205.933,-406.377,-205.933,-406.377,-406.377,-205.933,-406.377,-406.377,-406.377,-97.4041,-297.854,-297.854,-297.854,-286.114,-196.94,-397.385,-397.385,-397.385,-288.862,-396.482,-203.085,-403.529,-403.529,-403.529,-295.006,-394.538,-403.228,-160.917,-361.363,-361.363,-361.363,-252.84,-352.372,-358.516,-356.547,0,-200.458,-200.458,-200.458,-91.9334,-191.466,-197.61,-155.444,-178.182,-205.933,-406.377,-406.377,-406.377,-297.854,-397.385,-403.529,-361.363,-200.458,-406.377 dDocent_Contig_11599 54 . G T 532.423 . AB=0.184049;ABP=144.343;AC=3;AF=0.25;AN=12;AO=30;CIGAR=1X;DP=532;DPB=532;DPRA=0.441734;EPP=68.1545;EPPR=1093.09;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998008;PAO=0;PQA=0;PQR=0;PRO=0;QA=1183;QR=19759;RO=502;RPL=30;RPP=68.1545;RPPR=1093.09;RPR=0;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=502;SRP=1093.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:71:62,9:62:2425:9:343:-9.84426,0,-197.033 0/1:48:41,7:41:1624:7:283:-11.3941,0,-131.939 0/1:44:30,14:30:1159:14:557:-37.2257,0,-91.3408 0/0:100:100,0:100:3952:0:0:0,-30.103,-355.678 0/0:148:148,0:148:5849:0:0:0,-44.5524,-526.213 0/0:121:121,0:121:4750:0:0:0,-36.4246,-427.43 dDocent_Contig_11600 15 . C T 287.99 . AB=0.107075;ABP=704.363;AC=3;AF=0.25;AN=12;AO=92;CIGAR=1X;DP=1074;DPB=1074;DPRA=0;EPP=202.786;EPPR=2077.09;GTI=0;LEN=1;MEANALT=1.5;MQM=58.6522;MQMR=57.3504;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.072523;PAO=0;PQA=0;PQR=0;PRO=0;QA=3451;QR=39233;RO=979;RPL=0;RPP=202.786;RPPR=2128.88;RPR=92;RUN=1;SAF=92;SAP=202.786;SAR=0;SRF=973;SRP=2077.09;SRR=6;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:133:126,6:126:5041:6:222:0,-21.6225,-428.162 0/0:260:240,19:240:9607:19:692:0,-15.7003,-785.32 0/0:158:147,11:147:5891:11:416:0,-9.85,-482.647 0/1:237:214,22:214:8607:22:869:-7.07856,0,-691.139 0/1:126:112,14:112:4476:14:491:-6.3004,0,-362.673 0/1:160:140,20:140:5611:20:761:-20.6419,0,-452.331 dDocent_Contig_11602 11 . G T 105.524 . AB=0.294118;ABP=9.26925;AC=1;AF=0.125;AN=8;AO=5;CIGAR=1X;DP=95;DPB=95;DPRA=0.653846;EPP=13.8677;EPPR=198.443;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=189;QR=3456;RO=90;RPL=0;RPP=13.8677;RPPR=198.443;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=90;SRP=198.443;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:40,0:40:1564:0:0:0,-12.0412,-141.004 0/0:28:28,0:28:1091:0:0:0,-8.42884,-98.483 0/1:17:12,5:12:405:5:189:-12.2514,0,-31.6476 0/0:10:10,0:10:396:0:0:0,-3.0103,-35.9969 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11603 123 . C T 74.773 . AB=0.266667;ABP=10.1038;AC=2;AF=0.166667;AN=12;AO=4;CIGAR=1X;DP=108;DPB=108;DPRA=0.322581;EPP=11.6962;EPPR=228.843;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=8.67362e-19;PAIRED=0;PAIREDR=0.807692;PAO=0;PQA=0;PQR=0;PRO=0;QA=144;QR=3783;RO=104;RPL=0;RPP=11.6962;RPPR=228.843;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=228.843;SRR=104;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:11:10,1:10:370:1:35:-0.187299,0,-30.3389 0/0:11:11,0:11:403:0:0:0,-3.31133,-36.6158 0/0:19:19,0:19:697:0:0:0,-5.71957,-63.0615 0/1:4:1,3:1:35:3:109:-8.96388,0,-2.29451 0/0:15:15,0:15:519:0:0:0,-4.51545,-47.0303 0/0:48:48,0:48:1759:0:0:0,-14.4494,-158.587 dDocent_Contig_11604 22 . A G 34.709 . AB=0.0962963;ABP=194.116;AC=2;AF=0.166667;AN=12;AO=21;CIGAR=1X;DP=314;DPB=314;DPRA=1.056;EPP=48.6112;EPPR=637.08;GTI=0;LEN=1;MEANALT=1.2;MQM=59.381;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.952381;PAIREDR=0.952055;PAO=0;PQA=0;PQR=0;PRO=0;QA=840;QR=11694;RO=292;RPL=0;RPP=48.6112;RPPR=637.08;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=292;SRP=637.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:33,1:33:1319:1:39:0,-6.33846,-115.075 0/0:38:35,3:35:1395:3:121:0,-0.158943,-114.522 0/0:50:50,0:50:1995:0:0:0,-15.0515,-179.731 0/1:59:53,6:53:2151:6:244:-4.5096,0,-175.994 0/0:57:53,4:53:2122:4:161:0,-2.28343,-176.28 0/1:76:68,7:68:2712:7:275:-2.13198,0,-221.213 dDocent_Contig_11605 9 . C T 660.424 . AB=0.200957;ABP=165.351;AC=5;AF=0.416667;AN=12;AO=44;CIGAR=3X;DP=234;DPB=234;DPRA=0;EPP=98.5551;EPPR=413.419;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.909091;PAIREDR=0.899471;PAO=0;PQA=0;PQR=0;PRO=0;QA=1594;QR=6919;RO=189;RPL=0;RPP=98.5551;RPPR=413.419;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=189;SRP=413.419;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:25:22,2:22:787:2:79:0,-0.118397,-63.6369 0|1:30:26,4:26:939:4:118:-1.88037,0,-75.7726 0|1:29:24,5:24:892:5:183:-8.09094,0,-71.8582 0|1:51:44,7:44:1584:7:249:-7.39879,0,-127.469 0|1:44:27,17:27:1044:17:632:-43.9606,0,-81.0178 0|1:55:46,9:46:1673:9:333:-13.7617,0,-134.262 dDocent_Contig_11606 116 . G T 35.2811 . AB=0.142857;ABP=26.2761;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=162;DPB=162;DPRA=1.11538;EPP=13.8677;EPPR=343.931;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8089;NS=6;NUMALT=1;ODDS=0;PAIRED=0.4;PAIREDR=0.401274;PAO=0;PQA=0;PQR=0;PRO=0;QA=198;QR=6272;RO=157;RPL=5;RPP=13.8677;RPPR=343.931;RPR=0;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=343.931;SRR=157;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1217:0:0:0,-9.0309,-109.801 0/0:30:30,0:30:1208:0:0:0,-9.0309,-108.991 0/0:17:17,0:17:689:0:0:0,-5.11751,-62.3393 0/0:27:27,0:27:1044:0:0:0,-8.12781,-94.2389 0/1:21:18,3:18:727:3:122:-5.05086,0,-59.4338 0/0:37:35,2:35:1387:2:76:0,-3.92457,-117.169 dDocent_Contig_11607 88 . A C 42710.4 . AB=0;ABP=0;AC=4;AF=0.333333;AN=12;AO=1328;CIGAR=1X;DP=3787;DPB=3787;DPRA=1.13493;EPP=174.661;EPPR=65.5183;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0112952;PAIREDR=0.0211554;PAO=0;PQA=0;PQR=0;PRO=0;QA=49019;QR=90458;RO=2458;RPL=1328;RPP=2886.73;RPPR=5340.49;RPR=0;RUN=1;SAF=502;SAP=174.661;SAR=826;SRF=1096;SRP=65.5183;SRR=1362;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:580:580,0:580:21327:0:0:0,-174.597,-1918.56 0/0:728:728,0:728:26686:0:0:0,-219.15,-2400.57 0/0:482:482,0:482:17828:0:0:0,-145.096,-1603.83 0/0:626:626,0:626:23076:0:0:0,-188.445,-2075.83 1/1:531:1,530:1:29:530:19595:-1759.85,-156.947,0 1/1:840:41,798:41:1512:798:29424:-2510.42,-116.546,0 dDocent_Contig_11608 7 . G C 73.5241 . AB=0.428571;ABP=3.32051;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X1M2X;DP=112;DPB=112;DPRA=1.2;EPP=13.8677;EPPR=222.329;GTI=0;LEN=1;MEANALT=2;MQM=53.6;MQMR=59.6832;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.980198;PAO=0;PQA=0;PQR=0;PRO=0;QA=189;QR=3362;RO=101;RPL=0;RPP=13.8677;RPPR=222.329;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=101;SRP=222.329;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:7:4,3:4:133:3:115:-8.57387,0,-10.191 0|0:35:31,2:31:1021:2:74:0,-3.19647,-85.1542 0|0:29:27,0:27:918:0:0:0,-8.12781,-82.7223 0|0:6:6,0:6:198:0:0:0,-1.80618,-18.1404 0|0:34:32,0:32:1055:0:0:0,-9.63296,-95.0709 0|0:1:1,0:1:37:0:0:0,-0.30103,-3.69783 dDocent_Contig_11609 123 . G A 104.304 . AB=0.375;ABP=5.18177;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=65;DPB=65;DPRA=1.63265;EPP=16.0391;EPPR=131.127;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=183;QR=1959;RO=59;RPL=0;RPP=16.0391;RPPR=131.127;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=131.127;SRR=59;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:237:0:0:0,-2.10721,-21.6614 0/0:14:14,0:14:476:0:0:0,-4.21442,-43.1653 0/0:12:12,0:12:385:0:0:0,-3.61236,-34.9607 0/0:11:11,0:11:382:0:0:0,-3.31133,-34.7143 0/0:5:5,0:5:144:0:0:0,-1.50515,-13.2437 0/1:16:10,6:10:335:6:183:-11.9533,0,-25.659 dDocent_Contig_11610 30 . C T 4310.44 . AB=0.116883;ABP=199.345;AC=0;AF=0;AN=12;AO=19;CIGAR=3X1M1X1M1X;DP=454;DPB=454;DPRA=1.46212;EPP=44.2683;EPPR=617.537;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=747;QR=10967;RO=283;RPL=0;RPP=44.2683;RPPR=617.537;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=283;SRP=617.537;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:154:93,18,38:93:3561:18,38:707,1509:-96.2411,-66.0877,-352.877,0,-234.068,-280.778 0|0:140:133,0,7:133:5192:0,7:0,284:0,-40.037,-466.81,-16.2102,-443.388,-441.281 0|0:39:38,1,0:38:1498:1,0:40,0:0,-7.74449,-131.081,-11.4391,-131.382,-134.677 0|0:63:19,0,42:19:716:0,42:0,1661:-131.096,-136.816,-195.475,0,-58.7771,-46.1339 0|0:46:0,0,46:0:0:0,46:0,1816:-163.648,-163.648,-163.648,-13.8474,-13.8474,0 0|0:12:0,0,12:0:0:0,12:0,477:-43.2804,-43.2804,-43.2804,-3.61236,-3.61236,0 dDocent_Contig_11611 10 . C A 105.581 . AB=0.163265;ABP=51.2702;AC=3;AF=0.25;AN=12;AO=8;CIGAR=1X;DP=115;DPB=115;DPRA=0.742424;EPP=20.3821;EPPR=235.358;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.962617;PAO=0;PQA=0;PQR=0;PRO=0;QA=316;QR=4008;RO=107;RPL=0;RPP=20.3821;RPPR=235.358;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=107;SRP=235.358;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:10:9,1:9:333:1:41:-1.08427,0,-27.3038 0/1:19:16,3:16:583:3:119:-5.37561,0,-47.0791 0/0:10:10,0:10:375:0:0:0,-3.0103,-34.0903 0/0:34:34,0:34:1306:0:0:0,-10.235,-117.812 0/1:20:16,4:16:583:4:156:-8.3956,0,-46.7679 0/0:22:22,0:22:828:0:0:0,-6.62266,-74.8273 dDocent_Contig_11612 26 . T G 505.394 . AB=0.211864;ABP=88.1026;AC=3;AF=0.3;AN=10;AO=25;CIGAR=1X;DP=150;DPB=150;DPRA=2.45833;EPP=57.2971;EPPR=274.444;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.984;PAO=0;PQA=0;PQR=0;PRO=0;QA=1003;QR=4893;RO=125;RPL=0;RPP=57.2971;RPPR=274.444;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=125;SRP=274.444;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:1149:0:0:0,-8.72987,-103.693 0/1:50:42,8:42:1633:8:323:-14.3871,0,-132.162 0/1:36:24,12:24:928:12:484:-33.074,0,-72.9824 0/1:32:27,5:27:1060:5:196:-8.37927,0,-86.067 0/0:3:3,0:3:123:0:0:0,-0.90309,-11.4648 ./.:.:.:.:.:.:.:. dDocent_Contig_11613 17 . C T 323.456 . AB=0.0654206;ABP=178.534;AC=0;AF=0;AN=12;AO=7;CIGAR=1X2M;DP=264;DPB=264;DPRA=0.575269;EPP=18.2106;EPPR=489.42;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=280;QR=8841;RO=224;RPL=0;RPP=18.2106;RPPR=489.42;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=224;SRP=489.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:33:23,2,4,0,4:23:893:2,4,0,4:78,153,0,161:-6.3524,-6.86498,-79.6229,-0.730684,-67.6743,-72.8817,-13.2761,-80.225,-74.0858,-86.6366,0,-66.9539,-60.8148,-73.3657,-72.1616 0|0:81:78,0,0,0,3:78:3054:0,0,0,3:0,0,0,123:0,-23.4803,-274.559,-23.4803,-274.559,-274.559,-23.4803,-274.559,-274.559,-274.559,-12.9186,-264.406,-264.406,-264.406,-263.503 0|0:34:29,0,0,2,3:29:1164:0,0,2,3:0,0,82,122:-1.33139,-10.0613,-105.965,-10.0613,-105.965,-105.965,-3.29178,-99.1959,-99.1959,-98.5938,0,-95.9009,-95.9009,-89.1322,-94.9978 0|0:43:43,0,0,0,0:43:1727:0,0,0,0:0,0,0,0:0,-12.9443,-155.652,-12.9443,-155.652,-155.652,-12.9443,-155.652,-155.652,-155.652,-12.9443,-155.652,-155.652,-155.652,-155.652 0|0:28:22,0,3,1,2:22:864:0,3,1,2:0,122,40,78:-3.44719,-10.0699,-81.1237,0,-71.059,-70.1559,-6.77477,-77.8284,-67.7636,-77.5274,-3.66372,-74.713,-64.6482,-71.4177,-74.1109 0|0:45:29,0,0,4,11:29:1139:0,0,4,11:0,0,158,442:-27.7373,-36.4672,-130.152,-36.4672,-130.152,-130.152,-23.4614,-117.15,-117.15,-115.946,0,-93.7253,-93.7253,-80.7227,-90.414 dDocent_Contig_11614 21 . C T 847.647 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=3;CIGAR=1X2M2D1M;DP=184;DPB=169;DPRA=15.3333;EPP=9.52472;EPPR=162.371;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.748201;PAO=0;PQA=0;PQR=0;PRO=0;QA=118;QR=5325;RO=139;RPL=0;RPP=9.52472;RPPR=304.845;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=120;SRP=162.371;SRR=19;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:34:27,0,7:27:1042:0,7:0,238:-11.5142,-19.642,-105.245,0,-85.9523,-83.8451 0|0:37:26,0,11:26:957:0,11:0,423:-27.2809,-35.1077,-113.33,0,-78.602,-75.2907 0|0:50:43,0,7:43:1676:0,7:0,279:-10.4299,-23.3741,-161.117,0,-138.14,-136.033 0|0:46:39,3,4:39:1506:3,4:118,136:0,-2.01124,-124.825,-0.740214,-114.702,-123.205 0|0:3:0,0,3:0:0:0,3:0,109:-10.1653,-10.1653,-10.1653,-0.90309,-0.90309,0 0|0:14:4,0,10:4:144:0,10:0,405:-32.596,-33.8001,-45.5312,0,-12.1036,-9.09328 dDocent_Contig_11615 8 . A G 12271.6 . AB=0.233621;ABP=717.956;AC=9;AF=0.75;AN=12;AO=271;CIGAR=1M1X5M;DP=1160;DPB=1160.14;DPRA=0;EPP=565.71;EPPR=356.96;GTI=0;LEN=1;MEANALT=12.3333;MQM=47.4576;MQMR=59.4847;NS=6;NUMALT=6;ODDS=2.22045e-16;PAIRED=0.95203;PAIREDR=0.97546;PAO=0;PQA=0;PQR=0;PRO=0;QA=10192;QR=6239;RO=163;RPL=0;RPP=591.479;RPPR=356.96;RPR=271;RUN=1;SAF=268;SAP=565.71;SAR=3;SRF=163;SRP=356.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:117:37,7,31,0,9,12,3:37:1404:7,31,0,9,12,3:271,857,0,181,460,78:-51.3251,-43.8765,-156.422,0,-96.0688,-105.319,-62.4632,-158.53,-114.651,-177.113,-50.5943,-146.659,-102.787,-165.242,-162.533,-24.6929,-120.767,-76.8898,-139.352,-127.481,-135.739,-56.8887,-152.955,-109.078,-171.539,-159.668,-133.777,-170.636 0|1:275:51,20,77,0,9,7,102:51:1974:20,77,0,9,7,102:763,1865,0,112,265,3791:-283.349,-240.222,-396.092,-167.842,-271.252,-306.547,-298.702,-402.113,-329.726,-460.59,-293.45,-396.86,-324.478,-455.337,-452.628,-276.975,-380.386,-308.001,-438.864,-433.611,-436.756,0,-103.429,-31.0666,-161.912,-156.663,-140.184,-131.207 0|1:187:48,2,44,0,16,6,60:48:1813:2,44,0,16,6,60:74,1124,0,144,227,2376:-173.226,-181.953,-329.945,-106.154,-249.024,-241.501,-187.676,-330.547,-254.746,-336.27,-183.49,-326.356,-250.565,-332.078,-327.261,-169.063,-311.936,-236.136,-317.659,-313.468,-315.853,0,-142.906,-67.106,-148.63,-144.446,-130.016,-130.568 1|1:211:27,11,92,0,15,6,44:27:1048:11,92,0,15,6,44:394,1830,0,161,231,1668:-159.903,-137.615,-219.85,-46.7347,-101.867,-104.583,-168.031,-223.161,-132.278,-253.576,-161.526,-216.656,-125.794,-247.07,-242.555,-149.059,-204.19,-113.308,-234.605,-228.099,-232.799,-35.7375,-90.8757,0,-121.293,-114.789,-102.32,-108.048 1|1:148:0,0,122,3,1,0,15:0:0:0,122,3,1,0,15:0,3016,109,13,0,558:-252.183,-252.183,-252.183,-43.7937,-43.7937,-7.06809,-243.412,-243.412,-35.0195,-242.509,-251.576,-251.576,-43.1941,-242.805,-251.275,-252.183,-252.183,-43.7937,-243.412,-251.576,-252.183,-208.441,-208.441,0,-199.67,-207.834,-208.441,-203.925 1|1:222:0,0,134,14,4,0,47:0:0:0,134,14,4,0,47:0,2897,195,121,0,1721:-318.393,-318.393,-318.393,-137.073,-137.073,-96.7346,-308.654,-308.654,-127.361,-304.439,-308.885,-308.885,-127.566,-299.145,-307.681,-318.393,-318.393,-137.073,-308.654,-308.885,-318.393,-181.347,-181.347,0,-171.607,-171.838,-181.347,-167.199 dDocent_Contig_11618 17 . T C 736.905 . AB=0.821429;ABP=28.1373;AC=1;AF=0.0833333;AN=12;AO=23;CIGAR=1X;DP=617;DPB=617;DPRA=0.237691;EPP=52.9542;EPPR=1292.86;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=926;QR=23815;RO=594;RPL=0;RPP=52.9542;RPPR=1292.86;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=594;SRP=1292.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:180:180,0:180:7190:0:0:0,-54.1854,-646.736 0/0:201:201,0:201:8078:0:0:0,-60.507,-726.548 0/0:90:90,0:90:3606:0:0:0,-27.0927,-324.555 0/0:110:110,0:110:4416:0:0:0,-33.1133,-397.374 0/1:28:5,23:5:203:23:926:-75.2134,0,-10.2242 0/0:8:8,0:8:322:0:0:0,-2.40824,-29.3465 dDocent_Contig_11619 70 . C G 1218.85 . AB=0;ABP=0;AC=2;AF=0.2;AN=10;AO=38;CIGAR=1X;DP=424;DPB=424;DPRA=0.405195;EPP=85.5263;EPPR=839.027;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.981818;PAO=0;PQA=0;PQR=0;PRO=0;QA=1381;QR=13576;RO=385;RPL=38;RPP=85.5263;RPPR=839.027;RPR=0;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=385;SRP=839.027;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:88:88,0:88:3081:0:0:0,-26.4906,-277.518 0/0:132:131,0:131:4559:0:0:0,-39.4349,-410.123 0/0:52:52,0:52:1858:0:0:0,-15.6536,-167.488 0/0:113:113,0:113:4047:0:0:0,-34.0164,-364.393 ./.:.:.:.:.:.:.:. 1/1:39:1,38:1:31:38:1381:-121.487,-8.64072,0 dDocent_Contig_11620 75 . G T 103.282 . AB=0.144737;ABP=86.3263;AC=3;AF=0.25;AN=12;AO=13;CIGAR=1X;DP=164;DPB=164;DPRA=1.10784;EPP=31.2394;EPPR=330.903;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.307692;PAIREDR=0.483444;PAO=0;PQA=0;PQR=0;PRO=0;QA=494;QR=5719;RO=151;RPL=7;RPP=3.17734;RPPR=7.1663;RPR=6;RUN=1;SAF=7;SAP=3.17734;SAR=6;SRF=84;SRP=7.1663;SRR=67;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:25,3:25:939:3:112:-2.01765,0,-76.3969 0/0:37:35,2:35:1312:2:80:0,-3.54632,-110.783 0/0:21:21,0:21:790:0:0:0,-6.32163,-71.4138 0/1:35:31,4:31:1196:4:152:-3.51358,0,-97.395 0/0:30:30,0:30:1148:0:0:0,-9.0309,-103.61 0/1:13:9,4:9:334:4:150:-9.95241,0,-26.4976 dDocent_Contig_11621 56 . T C 2429.7 . AB=0.40553;ABP=19.8317;AC=4;AF=0.333333;AN=12;AO=88;CIGAR=1X;DP=234;DPB=234;DPRA=6.38235;EPP=194.1;EPPR=320.045;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3492;QR=5722;RO=146;RPL=88;RPP=194.1;RPPR=320.045;RPR=0;RUN=1;SAF=88;SAP=194.1;SAR=0;SRF=146;SRP=320.045;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:48:30,18:30:1174:18:710:-49.7775,0,-91.4887 0/1:89:52,37:52:2028:37:1459:-104.77,0,-155.934 0/1:35:23,12:23:902:12:471:-32.1997,0,-70.95 0/1:45:24,21:24:932:21:852:-63.445,0,-70.6334 0/0:5:5,0:5:201:0:0:0,-1.50515,-18.4709 0/0:12:12,0:12:485:0:0:0,-3.61236,-44.0014 dDocent_Contig_11623 28 . G A 46.5772 . AB=0.4;ABP=3.44459;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=1X;DP=190;DPB=190;DPRA=0.135135;EPP=7.35324;EPPR=411.247;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=7297;RO=188;RPL=0;RPP=7.35324;RPPR=411.247;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=188;SRP=411.247;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:37,0:37:1431:0:0:0,-11.1381,-129.047 0/0:26:26,0:26:1016:0:0:0,-7.82678,-91.7313 0/0:35:35,0:35:1369:0:0:0,-10.536,-123.475 0/0:80:80,0:80:3099:0:0:0,-24.0824,-279.006 0/1:5:3,2:3:119:2:81:-6.18058,0,-9.58986 0/0:7:7,0:7:263:0:0:0,-2.10721,-24.0258 dDocent_Contig_11624 114 . A G 64.65 . AB=0.193548;ABP=28.2974;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=113;DPB=113;DPRA=1.89024;EPP=16.0391;EPPR=235.358;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.962617;PAO=0;PQA=0;PQR=0;PRO=0;QA=189;QR=3631;RO=107;RPL=0;RPP=16.0391;RPPR=235.358;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=235.358;SRR=107;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1184:0:0:0,-10.536,-106.862 0/1:31:25,6:25:840:6:189:-7.98769,0,-66.5789 0/0:21:21,0:21:721:0:0:0,-6.32163,-65.2104 0/0:18:18,0:18:611:0:0:0,-5.41854,-55.3106 0/0:6:6,0:6:205:0:0:0,-1.80618,-18.7851 0/0:2:2,0:2:70:0:0:0,-0.60206,-6.6474 dDocent_Contig_11625 11 . C T 99.1328 . AB=0.193548;ABP=28.2974;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=3M1X;DP=145;DPB=146;DPRA=0.54386;EPP=16.0391;EPPR=300.502;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.905109;PAO=0;PQA=0;PQR=0;PRO=0;QA=241;QR=4897;RO=137;RPL=0;RPP=16.0391;RPPR=300.502;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=137;SRP=300.502;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:15:12,0,3:12:439:0,3:0,119:-6.57905,-10.1914,-46.0376,0,-36.2363,-35.3332 0|0:22:22,0,0:22:783:0,0:0,0:0,-6.62266,-70.7786,-6.62266,-70.7786,-70.7786 0|0:33:33,0,0:33:1115:0,0:0,0:0,-9.93399,-100.624,-9.93399,-100.624,-100.624 0|1:16:13,0,3:13:481:0,3:0,122:-6.55601,-10.4694,-49.7833,0,-39.7132,-38.8101 0|0:34:34,0,0:34:1229:0,0:0,0:0,-10.235,-110.895,-10.235,-110.895,-110.895 0|0:25:23,2,0:23:850:2,0:68,0:0,-1.06934,-70.3575,-6.92369,-70.9595,-76.4717 dDocent_Contig_11626 7 . G A 484.975 . AB=0.118998;ABP=606.965;AC=2;AF=0.166667;AN=12;AO=73;CIGAR=1X;DP=1220;DPB=1220;DPRA=2.01818;EPP=161.528;EPPR=2419.86;GTI=0;LEN=1;MEANALT=2.6;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2742;QR=34927;RO=1113;RPL=0;RPP=161.528;RPPR=2419.86;RPR=73;RUN=1;SAF=73;SAP=161.528;SAR=0;SRF=1113;SRP=2419.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:237:222,8:222:6931:8:309:0,-41.3149,-595.729 0/0:290:269,6:269:8244:6:205:0,-64.2869,-723.276 0/1:172:153,17:153:4911:17:640:-6.53364,0,-390.709 0/1:307:262,40:262:8166:40:1511:-45.1857,0,-643.836 0/0:110:108,0:108:3474:0:0:0,-32.5112,-312.699 0/0:104:99,2:99:3201:2:77:0,-23.395,-281.076 dDocent_Contig_11627 166 . T C 48.9381 . AB=0.214286;ABP=12.937;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=62;DPB=62;DPRA=1.45833;EPP=9.52472;EPPR=131.127;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=8.67362e-19;PAIRED=0.333333;PAIREDR=0.864407;PAO=0;PQA=0;PQR=0;PRO=0;QA=114;QR=2199;RO=59;RPL=3;RPP=9.52472;RPPR=131.127;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=131.127;SRR=59;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:565:0:0:0,-4.81648,-51.1655 0/0:2:2,0:2:81:0:0:0,-0.60206,-7.68573 0/0:9:9,0:9:359:0:0:0,-2.70927,-32.6731 0/0:13:13,0:13:500:0:0:0,-3.91339,-45.336 0/0:8:8,0:8:280:0:0:0,-2.40824,-25.5279 0/1:14:11,3:11:414:3:114:-6.4165,0,-33.3863 dDocent_Contig_11628 41 . A T 34.3564 . AB=0.142857;ABP=26.2761;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=208;DPB=208;DPRA=0.561497;EPP=9.52472;EPPR=448.162;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.995122;PAO=0;PQA=0;PQR=0;PRO=0;QA=121;QR=7956;RO=205;RPL=0;RPP=9.52472;RPPR=448.162;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=205;SRP=448.162;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1051:0:0:0,-8.12781,-94.8907 0/0:24:24,0:24:957:0:0:0,-7.22472,-86.4342 0/0:55:55,0:55:2144:0:0:0,-16.5566,-193.148 0/0:30:30,0:30:1154:0:0:0,-9.0309,-104.149 0/0:51:51,0:51:1941:0:0:0,-15.3525,-174.907 0/1:21:18,3:18:709:3:121:-4.95836,0,-57.8193 dDocent_Contig_11629 61 . T A 1387.78 . AB=0.453782;ABP=5.21827;AC=6;AF=0.5;AN=12;AO=54;CIGAR=1X;DP=119;DPB=119;DPRA=0;EPP=120.27;EPPR=144.156;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.984615;PAO=0;PQA=0;PQR=0;PRO=0;QA=2041;QR=2462;RO=65;RPL=54;RPP=120.27;RPPR=144.156;RPR=0;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=65;SRP=144.156;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:5,15:5:180:15:564:-45.0759,0,-10.5297 0/1:18:13,5:13:468:5:180:-11.1319,0,-37.0283 0/1:32:18,14:18:701:14:537:-39.0297,0,-53.785 0/1:26:11,15:11:411:15:558:-42.7202,0,-29.5098 0/1:9:7,2:7:280:2:81:-4.97646,0,-22.862 0/1:14:11,3:11:422:3:121:-7.06578,0,-34.1133 dDocent_Contig_11630 38 . C T 251.85 . AB=0.314286;ABP=13.4954;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=332;DPB=332;DPRA=0.894958;EPP=13.8677;EPPR=75.4206;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.528846;PAO=0;PQA=0;PQR=0;PRO=0;QA=724;QR=11149;RO=312;RPL=0;RPP=46.4397;RPPR=680.51;RPR=20;RUN=1;SAF=5;SAP=13.8677;SAR=15;SRF=105;SRP=75.4206;SRR=207;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:46:45,1:45:1619:1:35:0,-10.3487,-142.469 0/0:69:69,0:69:2472:0:0:0,-20.7711,-222.698 0/1:35:24,11:24:858:11:410:-26.7078,0,-66.9859 0/0:74:68,6:68:2453:6:209:0,-3.12517,-201.841 0/0:50:50,0:50:1764:0:0:0,-15.0515,-159.026 0/0:58:56,2:56:1983:2:70:0,-10.8123,-172.067 dDocent_Contig_11631 98 . N A 56.9965 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0.5;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=60;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:60:-5.69857,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11632 59 . C A 723.193 . AB=0.174061;ABP=273.377;AC=5;AF=0.416667;AN=12;AO=51;CIGAR=1X;DP=353;DPB=353;DPRA=0.976667;EPP=113.755;EPPR=658.795;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.27451;PAIREDR=0.407285;PAO=0;PQA=0;PQR=0;PRO=0;QA=1867;QR=11110;RO=302;RPL=21;RPP=6.45911;RPPR=5.33996;RPR=30;RUN=1;SAF=21;SAP=6.45911;SAR=30;SRF=142;SRP=5.33996;SRR=160;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:77:62,15:62:2248:15:533:-25.1133,0,-179.353 0/1:66:55,11:55:2049:11:405:-16.9273,0,-164.78 0/0:60:60,0:60:2243:0:0:0,-18.0618,-202.081 0/1:42:34,8:34:1239:8:285:-13.3438,0,-99.1536 0/1:52:41,11:41:1511:11:421:-22.5846,0,-120.598 0/1:56:50,6:50:1820:6:223:-3.57018,0,-147.202 dDocent_Contig_11635 81 . G A 95.9978 . AB=0.170213;ABP=47.41;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=147;DPB=147;DPRA=0.94;EPP=20.3821;EPPR=304.845;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.496403;PAO=0;PQA=0;PQR=0;PRO=0;QA=281;QR=4980;RO=139;RPL=8;RPP=20.3821;RPPR=304.845;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=139;SRP=304.845;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:543:0:0:0,-4.51545,-49.2059 0/0:37:37,0:37:1288:0:0:0,-11.1381,-116.207 0/0:15:15,0:15:526:0:0:0,-4.51545,-47.6684 0/0:33:33,0:33:1206:0:0:0,-9.93399,-108.846 0/1:15:10,5:10:356:5:170:-11.1189,0,-27.8647 0/1:32:29,3:29:1061:3:111:-0.720962,0,-86.169 dDocent_Contig_11636 46 . T C 155.133 . AB=0.18;ABP=47.4821;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=108;DPB=108;DPRA=1.72414;EPP=22.5536;EPPR=217.986;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=362;QR=3828;RO=99;RPL=0;RPP=22.5536;RPPR=217.986;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=99;SRP=217.986;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:4:4,0:4:160:0:0:0,-1.20412,-14.7834 0/0:42:42,0:42:1622:0:0:0,-12.6433,-146.23 0/0:3:3,0:3:121:0:0:0,-0.90309,-11.28 0/0:9:9,0:9:342:0:0:0,-2.70927,-31.1352 0/1:21:19,2:19:725:2:80:-1.27016,0,-59.2492 0/1:29:22,7:22:858:7:282:-17.0227,0,-68.8019 dDocent_Contig_11637 21 . G T 262.409 . AB=0;ABP=0;AC=2;AF=0.2;AN=10;AO=22;CIGAR=1X;DP=792;DPB=792;DPRA=0.65608;EPP=50.7827;EPPR=1675.04;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=877;QR=30374;RO=770;RPL=0;RPP=50.7827;RPPR=1675.04;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=770;SRP=1675.04;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:198:198,0:198:7709:0:0:0,-59.6039,-693.456 0/0:234:219,15:219:8700:15:594:0,-16.642,-728.703 0/0:132:132,0:132:5223:0:0:0,-39.736,-469.94 0/0:221:221,0:221:8742:0:0:0,-66.5276,-786.292 ./.:.:.:.:.:.:.:. 1/1:7:0,7:0:0:7:283:-25.843,-2.10721,0 dDocent_Contig_11638 17 . T A 407.464 . AB=0.190476;ABP=107.861;AC=4;AF=0.333333;AN=12;AO=27;CIGAR=1X;DP=197;DPB=197;DPRA=0;EPP=61.6401;EPPR=372.161;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.740741;PAIREDR=0.647059;PAO=0;PQA=0;PQR=0;PRO=0;QA=1054;QR=6560;RO=170;RPL=0;RPP=61.6401;RPPR=372.161;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=170;SRP=372.161;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:26,6:26:987:6:232:-11.6147,0,-79.4949 0/0:35:33,2:33:1260:2:78:0,-3.13275,-106.277 0/1:37:29,8:29:1124:8:317:-17.7579,0,-90.3141 0/1:27:21,6:21:814:6:230:-12.9347,0,-65.4492 0/1:30:26,4:26:1010:4:159:-5.66085,0,-82.1729 0/0:36:35,1:35:1365:1:38:0,-7.03981,-119.327 dDocent_Contig_11639 89 . G T 313.413 . AB=0.27451;ABP=25.534;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=265;DPB=265;DPRA=1.19159;EPP=3.63072;EPPR=19.0065;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.857143;PAIREDR=0.545817;PAO=0;PQA=0;PQR=0;PRO=0;QA=532;QR=9413;RO=251;RPL=14;RPP=33.4109;RPPR=548.05;RPR=0;RUN=1;SAF=6;SAP=3.63072;SAR=8;SRF=104;SRP=19.0065;SRR=147;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:34,0:34:1302:0:0:0,-10.235,-117.453 0/0:57:57,0:57:2110:0:0:0,-17.1587,-190.104 0/0:20:20,0:20:772:0:0:0,-6.0206,-69.7999 0/0:56:56,0:56:2066:0:0:0,-16.8577,-186.159 0/0:47:47,0:47:1768:0:0:0,-14.1484,-159.361 0/1:51:37,14:37:1395:14:532:-32.8642,0,-110.467 dDocent_Contig_11641 26 . A G 148.279 . AB=0.3;ABP=6.48466;AC=3;AF=0.25;AN=12;AO=5;CIGAR=1X;DP=116;DPB=116;DPRA=0.230769;EPP=13.8677;EPPR=244.044;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=203;QR=4365;RO=111;RPL=0;RPP=13.8677;RPPR=244.044;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=111;SRP=244.044;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:31,0:31:1238:0:0:0,-9.33193,-111.696 0/0:14:14,0:14:553:0:0:0,-4.21442,-50.1107 0/0:22:22,0:22:877:0:0:0,-6.62266,-79.238 0/0:37:37,0:37:1428:0:0:0,-11.1381,-128.783 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 0/1:10:7,3:7:269:3:121:-8.2699,0,-21.5578 dDocent_Contig_11642 10 . C A 156.773 . AB=0.183673;ABP=45.5977;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=231;DPB=231;DPRA=1.34615;EPP=22.5536;EPPR=485.077;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=351;QR=8360;RO=222;RPL=0;RPP=22.5536;RPPR=485.077;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=222;SRP=485.077;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:13:13,0:13:500:0:0:0,-3.91339,-45.3425 0/1:49:40,9:40:1519:9:351:-17.2002,0,-122.206 0/0:16:16,0:16:627:0:0:0,-4.81648,-56.7662 0/0:37:37,0:37:1371:0:0:0,-11.1381,-123.641 0/0:48:48,0:48:1807:0:0:0,-14.4494,-162.86 0/0:68:68,0:68:2536:0:0:0,-20.47,-228.407 dDocent_Contig_11643 10 . C G 1484.84 . AB=0.280992;ABP=103.831;AC=2;AF=0.166667;AN=12;AO=74;CIGAR=1X;DP=608;DPB=608;DPRA=1.3937;EPP=163.699;EPPR=1162.58;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.955056;PAO=0;PQA=0;PQR=0;PRO=0;QA=2705;QR=19630;RO=534;RPL=0;RPP=163.699;RPPR=1162.58;RPR=74;RUN=1;SAF=74;SAP=163.699;SAR=0;SRF=534;SRP=1162.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:84:84,0:84:3012:0:0:0,-25.2865,-271.234 0/0:112:106,6:106:3855:6:216:0,-13.9306,-327.243 0/0:51:51,0:51:1867:0:0:0,-15.3525,-168.257 0/0:119:119,0:119:4386:0:0:0,-35.8226,-394.78 0/1:128:101,27:101:3755:27:982:-50.1375,0,-299.485 0/1:114:73,41:73:2755:41:1507:-101.568,0,-213.773 dDocent_Contig_11644 209 . N G 65.5375 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=69;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11645 68 . G A 101.027 . AB=0.24;ABP=17.6895;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=100;DPB=100;DPRA=1.66667;EPP=16.0391;EPPR=207.129;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.840426;PAO=0;PQA=0;PQR=0;PRO=0;QA=209;QR=3132;RO=94;RPL=6;RPP=16.0391;RPPR=207.129;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=94;SRP=207.129;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:2:2,0:2:66:0:0:0,-0.60206,-6.26836 0/0:20:20,0:20:645:0:0:0,-6.0206,-58.3543 0/0:16:16,0:16:528:0:0:0,-4.81648,-47.8343 0/0:33:33,0:33:1119:0:0:0,-9.93399,-101.015 0/0:4:4,0:4:129:0:0:0,-1.20412,-11.9286 0/1:25:19,6:19:645:6:209:-11.6253,0,-50.8432 dDocent_Contig_11646 7 . G A 227.626 . AB=0.146341;ABP=136.635;AC=3;AF=0.25;AN=12;AO=18;CIGAR=1X;DP=234;DPB=234;DPRA=1.10811;EPP=42.0968;EPPR=463.362;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.777778;PAIREDR=0.679245;PAO=0;PQA=0;PQR=0;PRO=0;QA=685;QR=6913;RO=212;RPL=0;RPP=42.0968;RPPR=463.362;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=212;SRP=463.362;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:22,0:22:760:0:0:0,-6.62266,-68.45 0/0:51:51,0:51:1583:0:0:0,-15.3525,-142.71 0/0:37:37,0:37:1246:0:0:0,-11.1381,-112.416 0/1:45:41,4:41:1282:4:150:-0.319152,0,-102.091 0/1:45:36,7:36:1263:7:272:-11.7311,0,-100.885 0/1:33:25,7:25:779:7:263:-14.2518,0,-60.6365 dDocent_Contig_11647 204 . C T 54.6097 . AB=0.112;ABP=166.461;AC=1;AF=0.125;AN=8;AO=30;CIGAR=1X;DP=841;DPB=841;DPRA=0.832244;EPP=68.1545;EPPR=1764.07;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1072;QR=29122;RO=811;RPL=30;RPP=68.1545;RPPR=1764.07;RPR=0;RUN=1;SAF=0;SAP=68.1545;SAR=30;SRF=0;SRP=1764.07;SRR=811;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:257:241,16:241:8694:16:578:0,-25.0099,-730.058 0/0:286:286,0:286:10227:0:0:0,-86.0946,-920.314 0/1:125:111,14:111:3988:14:494:-7.15994,0,-321.461 0/0:173:173,0:173:6213:0:0:0,-52.0782,-559.232 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11648 7 . G C 5400.38 . AB=0.584375;ABP=22.7978;AC=6;AF=0.5;AN=12;AO=187;CIGAR=1X;DP=320;DPB=320;DPRA=0;EPP=409.076;EPPR=283.13;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.807487;PAIREDR=0.891473;PAO=0;PQA=0;PQR=0;PRO=0;QA=7167;QR=4079;RO=129;RPL=0;RPP=409.076;RPPR=283.13;RPR=187;RUN=1;SAF=187;SAP=409.076;SAR=0;SRF=129;SRP=283.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:45:26,18:26:823:18:665:-46.8024,0,-60.9854 0/1:60:35,25:35:1070:25:964:-69.0122,0,-78.4984 0/1:50:22,27:22:697:27:1034:-78.4948,0,-48.1455 0/1:61:28,31:28:892:31:1208:-91.0888,0,-62.6278 0/1:74:9,65:9:276:65:2487:-201.748,0,-2.85582 0/1:30:9,21:9:321:21:809:-64.1039,0,-20.1982 dDocent_Contig_11650 25 . G A 115.198 . AB=0.5;ABP=3.0103;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=197;DPB=197;DPRA=2.86275;EPP=22.5536;EPPR=411.247;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994681;PAO=0;PQA=0;PQR=0;PRO=0;QA=368;QR=7457;RO=188;RPL=0;RPP=22.5536;RPPR=411.247;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=188;SRP=411.247;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:8:4,4:4:163:4:164:-12.7417,0,-12.6502 0/0:91:87,4:87:3437:4:163:0,-12.3353,-294.336 0/0:47:46,1:46:1830:1:41:0,-10.0538,-160.817 0/0:32:32,0:32:1275:0:0:0,-9.63296,-115.018 0/0:10:10,0:10:403:0:0:0,-3.0103,-36.6301 0/0:9:9,0:9:349:0:0:0,-2.70927,-31.7633 dDocent_Contig_11652 137 . G A 107.079 . AB=0.190476;ABP=37.9607;AC=3;AF=0.25;AN=12;AO=9;CIGAR=1X;DP=79;DPB=79;DPRA=1.82353;EPP=22.5536;EPPR=155.013;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.885714;PAO=0;PQA=0;PQR=0;PRO=0;QA=336;QR=2808;RO=70;RPL=0;RPP=22.5536;RPPR=155.013;RPR=9;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=155.013;SRR=70;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:279:0:0:0,-2.10721,-25.4808 0/1:20:18,2:18:719:2:81:-1.66513,0,-59.0137 0/0:20:19,1:19:765:1:35:0,-2.52197,-65.6702 0/1:12:9,3:9:363:3:104:-6.0901,0,-29.4223 0/1:10:7,3:7:283:3:116:-7.8074,0,-22.8331 0/0:10:10,0:10:399:0:0:0,-3.0103,-36.2676 dDocent_Contig_11653 7 . G A 1172.18 . AB=0.302469;ABP=57.9137;AC=3;AF=0.25;AN=12;AO=50;CIGAR=1X;DP=299;DPB=299;DPRA=0.92381;EPP=111.584;EPPR=535.021;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1902;QR=7594;RO=245;RPL=0;RPP=111.584;RPPR=535.021;RPR=50;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=245;SRP=535.021;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:13,19:13:328:19:732:-56.578,0,-20.125 0/1:62:45,17:45:1409:17:655:-40.6229,0,-108.401 0/1:68:55,13:55:1595:13:504:-25.2389,0,-123.307 0/0:41:40,0:40:1284:0:0:0,-12.0412,-115.71 0/0:32:30,1:30:1017:1:11:0,-8.38193,-90.6756 0/0:64:62,0:62:1961:0:0:0,-18.6639,-176.514 dDocent_Contig_11654 69 . G A 1176.82 . AB=0.301508;ABP=71.1116;AC=6;AF=0.5;AN=12;AO=60;CIGAR=1X;DP=199;DPB=199;DPRA=0;EPP=133.299;EPPR=304.845;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.6;PAIREDR=0.654676;PAO=0;PQA=0;PQR=0;PRO=0;QA=2067;QR=4854;RO=139;RPL=30;RPP=3.0103;RPPR=4.27569;RPR=30;RUN=1;SAF=30;SAP=3.0103;SAR=30;SRF=74;SRP=4.27569;SRR=65;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:25,3:25:880:3:108:-1.64633,0,-71.0903 0/1:53:34,19:34:1202:19:659:-43.6792,0,-92.5328 0/1:32:11,21:11:376:21:706:-54.2179,0,-24.5356 0/1:36:32,4:32:1094:4:135:-1.6465,0,-87.9276 0/1:13:5,8:5:179:8:282:-21.8084,0,-12.547 0/1:37:32,5:32:1123:5:177:-5.13893,0,-90.241 dDocent_Contig_11655 7 . G A 1398.77 . AB=0.324022;ABP=51.1588;AC=5;AF=0.416667;AN=12;AO=62;CIGAR=1X;DP=257;DPB=257;DPRA=0;EPP=137.642;EPPR=415.59;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2382;QR=6143;RO=190;RPL=0;RPP=137.642;RPPR=415.59;RPR=62;RUN=1;SAF=62;SAP=137.642;SAR=0;SRF=190;SRP=415.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:14,12:14:454:12:463:-34.1945,0,-33.3382 0/1:22:12,9:12:388:9:345:-24.9486,0,-28.78 0/1:46:31,13:31:962:13:500:-31.9558,0,-73.4808 0/1:32:13,18:13:406:18:687:-52.7057,0,-27.3727 0/1:53:47,6:47:1556:6:232:-5.29434,0,-124.344 0/0:78:73,4:73:2377:4:155:0,-9.0193,-199.866 dDocent_Contig_11656 21 . T A 123.64 . AB=0.149254;ABP=74.6041;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=220;DPB=220;DPRA=0;EPP=39.9253;EPPR=443.819;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.764706;PAIREDR=0.714286;PAO=0;PQA=0;PQR=0;PRO=0;QA=671;QR=7965;RO=203;RPL=0;RPP=39.9253;RPPR=443.819;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=203;SRP=443.819;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:47:45,2:45:1791:2:81:0,-6.46268,-153.728 0/0:48:47,1:47:1836:1:41:0,-10.3549,-161.37 0/0:43:40,3:40:1552:3:119:0,-1.84928,-128.837 0/1:48:43,5:43:1686:5:195:-3.47422,0,-137.525 0/0:15:14,1:14:549:1:41:0,-0.420883,-45.6596 0/1:19:14,5:14:551:5:194:-12.109,0,-44.2122 dDocent_Contig_11657 15 . G A 221.3 . AB=0.16092;ABP=89.8942;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=596;DPB=596;DPRA=1.14512;EPP=42.0968;EPPR=1258.12;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.967128;PAO=0;PQA=0;PQR=0;PRO=0;QA=691;QR=22598;RO=578;RPL=0;RPP=42.0968;RPPR=1258.12;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=578;SRP=1258.12;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:80:80,0:80:3156:0:0:0,-24.0824,-284.129 0/0:88:88,0:88:3408:0:0:0,-26.4906,-306.787 0/0:130:126,4:126:4967:4:141:0,-26.1021,-433.9 0/0:119:119,0:119:4617:0:0:0,-35.8226,-415.491 0/0:92:92,0:92:3590:0:0:0,-27.6948,-323.146 0/1:87:73,14:73:2860:14:550:-23.6529,0,-231.337 dDocent_Contig_11658 26 . G A 1038.11 . AB=0.362637;ABP=17.9243;AC=6;AF=0.5;AN=12;AO=40;CIGAR=1X;DP=119;DPB=119;DPRA=0;EPP=89.8692;EPPR=174.557;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.425;PAIREDR=0.670886;PAO=0;PQA=0;PQR=0;PRO=0;QA=1559;QR=3174;RO=79;RPL=0;RPP=89.8692;RPPR=174.557;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=79;SRP=174.557;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:29:25,4:25:1005:4:142:-4.39468,0,-82.0135 0/0:22:21,1:21:850:1:41:0,-2.52809,-72.7164 0/1:26:14,12:14:561:12:463:-34.19,0,-43.0053 0/1:16:14,2:14:559:2:79:-2.68076,0,-45.8345 1/1:6:0,6:0:0:6:237:-21.7033,-1.80618,0 0/1:20:5,15:5:199:15:597:-48.0487,0,-12.2675 dDocent_Contig_11659 12 . G A 2353.05 . AB=0.469613;ABP=4.46195;AC=5;AF=0.416667;AN=12;AO=86;CIGAR=1X;DP=220;DPB=220;DPRA=0;EPP=189.757;EPPR=293.988;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.651163;PAIREDR=0.634328;PAO=0;PQA=0;PQR=0;PRO=0;QA=3344;QR=5224;RO=134;RPL=0;RPP=189.757;RPPR=293.988;RPR=86;RUN=1;SAF=86;SAP=189.757;SAR=0;SRF=134;SRP=293.988;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:55:34,21:34:1325:21:822:-57.7391,0,-102.966 0/1:47:25,22:25:974:22:850:-62.666,0,-73.8166 0/1:29:11,18:11:425:18:695:-54.1479,0,-29.8704 0/1:33:18,15:18:707:15:581:-42.6911,0,-54.0217 0/0:39:38,1:38:1480:1:40:0,-7.74449,-129.45 0/1:17:8,9:8:313:9:356:-27.2825,0,-23.4143 dDocent_Contig_11660 14 . C T 425.402 . AB=0.149758;ABP=223.567;AC=4;AF=0.333333;AN=12;AO=31;CIGAR=1X;DP=228;DPB=228;DPRA=4.92857;EPP=70.3259;EPPR=430.79;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1229;QR=7839;RO=197;RPL=0;RPP=70.3259;RPPR=430.79;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=197;SRP=430.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:13,6:13:526:6:245:-16.7099,0,-41.9672 0/1:52:43,9:43:1716:9:362:-17.2908,0,-139.009 0/1:86:77,9:77:3055:9:356:-6.51366,0,-249.156 0/1:50:43,7:43:1707:7:266:-9.24765,0,-138.801 0/0:17:17,0:17:671:0:0:0,-5.11751,-60.72 0/0:4:4,0:4:164:0:0:0,-1.20412,-15.1499 dDocent_Contig_11661 27 . A C 1060.37 . AB=0.296053;ABP=57.9257;AC=5;AF=0.416667;AN=12;AO=45;CIGAR=1X;DP=185;DPB=185;DPRA=0.921212;EPP=100.727;EPPR=307.016;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.755556;PAIREDR=0.757143;PAO=0;PQA=0;PQR=0;PRO=0;QA=1769;QR=5493;RO=140;RPL=0;RPP=100.727;RPPR=307.016;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=140;SRP=307.016;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:17,9:17:667:9:356:-24.5746,0,-52.534 0/1:42:27,15:27:1054:15:593:-41.0641,0,-82.513 0/1:18:12,6:12:479:6:235:-16.1026,0,-38.0428 0/1:45:33,12:33:1296:12:465:-28.651,0,-103.367 0/0:33:33,0:33:1284:0:0:0,-9.93399,-115.83 0/1:21:18,3:18:713:3:120:-4.86606,0,-58.1709 dDocent_Contig_11662 19 . T A 105.816 . AB=0.126316;ABP=118.235;AC=3;AF=0.25;AN=12;AO=12;CIGAR=1X;DP=159;DPB=159;DPRA=1.48438;EPP=29.068;EPPR=322.217;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.857143;PAO=0;PQA=0;PQR=0;PRO=0;QA=471;QR=5865;RO=147;RPL=0;RPP=29.068;RPPR=322.217;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=147;SRP=322.217;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:32,4:32:1286:4:161:-4.03782,0,-105.169 0/0:28:28,0:28:1107:0:0:0,-8.42884,-99.9142 0/0:13:13,0:13:506:0:0:0,-3.91339,-45.8731 0/0:23:23,0:23:916:0:0:0,-6.92369,-82.7437 0/1:25:20,5:20:805:5:188:-9.7552,0,-65.2385 0/1:34:31,3:31:1245:3:122:-1.13747,0,-102.085 dDocent_Contig_11663 7 . G A 153.295 . AB=0.3;ABP=20.3821;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=148;DPB=148;DPRA=2.79487;EPP=46.4397;EPPR=270.101;GTI=0;LEN=1;MEANALT=1.66667;MQM=22.8;MQMR=57.9512;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=768;QR=3949;RO=123;RPL=0;RPP=46.4397;RPPR=270.101;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=123;SRP=270.101;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:29,4:29:871:4:154:0,-3.49304,-72.0934 0/1:50:33,15:33:1078:15:575:-16.8523,0,-82.35 0/0:29:28,0:28:973:0:0:0,-8.42884,-85.0379 0/0:25:24,1:24:756:1:39:0,-4.5772,-65.3706 0/0:4:4,0:4:100:0:0:0,-1.20412,-9.24943 0/0:6:5,0:5:171:0:0:0,-1.50515,-15.5773 dDocent_Contig_11664 51 . G A 1463.22 . AB=0;ABP=0;AC=4;AF=0.333333;AN=12;AO=44;CIGAR=1X;DP=98;DPB=98;DPRA=1.69811;EPP=98.5551;EPPR=120.27;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.5;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.981481;PAO=0;PQA=0;PQR=0;PRO=0;QA=1646;QR=2047;RO=54;RPL=44;RPP=98.5551;RPPR=120.27;RPR=0;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=54;SRP=120.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:5:5,0:5:199:0:0:0,-1.50515,-18.288 0/0:28:28,0:28:1059:0:0:0,-8.42884,-95.6144 0/0:14:14,0:14:535:0:0:0,-4.21442,-48.4873 0/0:6:6,0:6:215:0:0:0,-1.80618,-19.6905 1/1:19:0,19:0:0:19:677:-61.2331,-5.71957,0 1/1:26:1,25:1:39:25:969:-84.3111,-4.62406,0 dDocent_Contig_11666 7 . C A 347.237 . AB=0.365854;ABP=9.41879;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=139;DPB=139;DPRA=1.15476;EPP=39.9253;EPPR=267.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=56.123;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.467213;PAO=0;PQA=0;PQR=0;PRO=0;QA=628;QR=4718;RO=122;RPL=0;RPP=39.9253;RPPR=267.93;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=122;SRP=267.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:21,1:21:804:1:39:0,-2.7261,-68.3457 0/0:27:27,0:27:1051:0:0:0,-8.12781,-94.6353 0/0:15:15,0:15:578:0:0:0,-4.51545,-52.1877 0/0:34:33,1:33:1280:1:38:0,-6.43775,-111.119 0/1:19:11,8:11:424:8:287:-20.4503,0,-32.7945 0/1:22:15,7:15:581:7:264:-17.4952,0,-45.7774 dDocent_Contig_11667 109 . G C 517.44 . AB=0.27907;ABP=21.2406;AC=6;AF=0.5;AN=12;AO=25;CIGAR=1X;DP=76;DPB=76;DPRA=2.33333;EPP=57.2971;EPPR=113.755;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.96;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=776;QR=1732;RO=51;RPL=0;RPP=57.2971;RPPR=113.755;RPR=25;RUN=1;SAF=0;SAP=57.2971;SAR=25;SRF=0;SRP=113.755;SRR=51;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:20,6:20:665:6:196:-10.1344,0,-52.3351 0/0:6:6,0:6:209:0:0:0,-1.80618,-19.1511 0/1:17:11,6:11:376:6:206:-13.7592,0,-29.0517 0/0:15:14,1:14:482:1:35:0,-1.01682,-40.2097 1/1:2:0,2:0:0:2:58:-5.50862,-0.60206,0 1/1:10:0,10:0:0:10:281:-25.5633,-3.0103,0 dDocent_Contig_11668 13 . T A 153766 . AB=0.862222;ABP=2054.35;AC=10;AF=0.833333;AN=12;AO=4640;CIGAR=1X;DP=5058;DPB=5058;DPRA=0;EPP=10078.6;EPPR=893.314;GTI=0;LEN=1;MEANALT=1.66667;MQM=59.9845;MQMR=59.9976;NS=6;NUMALT=1;ODDS=2.22045e-16;PAIRED=0.0465517;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=183658;QR=16496;RO=410;RPL=0;RPP=10078.6;RPPR=893.314;RPR=4640;RUN=1;SAF=4640;SAP=10078.6;SAR=0;SRF=410;SRP=893.314;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:826:34,789:34:1369:789:31073:-2670.46,-124.679,0 1/1:871:57,812:57:2304:812:32159:-2683.95,-54.472,0 1/1:765:33,732:33:1320:732:29095:-2496.88,-111.229,0 1/1:796:39,755:39:1570:755:29810:-2538.84,-97.8838,0 0/1:1016:142,873:142:5715:873:34552:-2800.8,0,-208.321 0/1:784:105,679:105:4218:679:26969:-2188.87,0,-143.558 dDocent_Contig_11669 52 . T C 106.648 . AB=0.294118;ABP=9.26925;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=135;DPB=135;DPRA=0.720339;EPP=13.8677;EPPR=285.302;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.8;PAO=0;PQA=0;PQR=0;PRO=0;QA=185;QR=4501;RO=130;RPL=5;RPP=13.8677;RPPR=285.302;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=130;SRP=285.302;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:17:12,5:12:407:5:185:-11.8867,0,-31.8363 0/0:29:29,0:29:994:0:0:0,-8.72987,-89.7641 0/0:14:14,0:14:481:0:0:0,-4.21442,-43.6141 0/0:25:25,0:25:858:0:0:0,-7.52575,-77.5284 0/0:23:23,0:23:826:0:0:0,-6.92369,-74.656 0/0:27:27,0:27:935:0:0:0,-8.12781,-84.4506 dDocent_Contig_11670 43 . A C 107.246 . AB=0.206897;ABP=24.6501;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=66;DPB=66;DPRA=1.56757;EPP=16.0391;EPPR=131.127;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.966102;PAO=0;PQA=0;PQR=0;PRO=0;QA=243;QR=2343;RO=59;RPL=0;RPP=16.0391;RPPR=131.127;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=59;SRP=131.127;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:8,4:8:323:4:164:-11.5375,0,-25.8262 0/1:17:15,2:15:604:2:79:-2.37973,0,-49.5816 0/0:10:9,0:9:350:0:0:0,-2.70927,-31.4473 0/0:8:8,0:8:309:0:0:0,-2.40824,-28.1649 0/0:13:13,0:13:519:0:0:0,-3.91339,-47.057 0/0:6:6,0:6:238:0:0:0,-1.80618,-21.7938 dDocent_Contig_11671 78 . T A 3650.29 . AB=0;ABP=0;AC=4;AF=0.333333;AN=12;AO=107;CIGAR=1X;DP=170;DPB=170;DPRA=3.39683;EPP=235.358;EPPR=139.813;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4042;QR=2387;RO=63;RPL=107;RPP=235.358;RPPR=139.813;RPR=0;RUN=1;SAF=107;SAP=235.358;SAR=0;SRF=63;SRP=139.813;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:884:0:0:0,-6.92369,-79.88 0/0:7:7,0:7:249:0:0:0,-2.10721,-22.7536 0/0:16:16,0:16:601:0:0:0,-4.81648,-54.4246 0/0:17:17,0:17:653:0:0:0,-5.11751,-59.106 1/1:32:0,32:0:0:32:1207:-108.923,-9.63296,0 1/1:75:0,75:0:0:75:2835:-255.328,-22.5773,0 dDocent_Contig_11672 22 . C T 385.665 . AB=0.222222;ABP=45.2334;AC=5;AF=0.5;AN=10;AO=17;CIGAR=1X;DP=72;DPB=72;DPRA=2.75;EPP=39.9253;EPPR=122.441;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=680;QR=2208;RO=55;RPL=0;RPP=39.9253;RPPR=122.441;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=55;SRP=122.441;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:7:6,1:6:238:1:41:-1.98736,0,-19.6869 0/1:28:23,5:23:934:5:204:-10.3152,0,-75.9333 0/1:28:20,8:20:792:8:314:-20.1952,0,-63.1647 0/0:6:6,0:6:244:0:0:0,-1.80618,-22.3388 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:121:-11.28,-0.90309,0 dDocent_Contig_11673 11 . G T 197.492 . AB=0.126761;ABP=174.832;AC=5;AF=0.416667;AN=12;AO=18;CIGAR=1X;DP=191;DPB=191;DPRA=0.579592;EPP=42.0968;EPPR=378.675;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.333333;PAIREDR=0.381503;PAO=0;PQA=0;PQR=0;PRO=0;QA=728;QR=6946;RO=173;RPL=0;RPP=42.0968;RPPR=378.675;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=173;SRP=378.675;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:30,3:30:1210:3:123:-1.5308,0,-99.2366 0/0:49:49,0:49:1959:0:0:0,-14.7505,-176.505 0/1:16:13,3:13:524:3:121:-6.46351,0,-42.6895 0/1:32:25,7:25:982:7:286:-16.4819,0,-79.0387 0/1:25:23,2:23:935:2:81:-0.159984,0,-76.9258 0/1:36:33,3:33:1336:3:117:-0.0727517,0,-109.66 dDocent_Contig_11675 22 . A G 48.4801 . AB=0.1875;ABP=16.582;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=83;DPB=83;DPRA=1.19403;EPP=9.52472;EPPR=176.728;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=8.67362e-19;PAIRED=0.666667;PAIREDR=0.7625;PAO=0;PQA=0;PQR=0;PRO=0;QA=120;QR=3184;RO=80;RPL=0;RPP=9.52472;RPPR=176.728;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=80;SRP=176.728;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:714:0:0:0,-5.41854,-64.5818 0/0:5:5,0:5:198:0:0:0,-1.50515,-18.1974 0/0:5:5,0:5:202:0:0:0,-1.50515,-18.5621 0/1:16:13,3:13:522:3:120:-6.37083,0,-42.5073 0/0:6:6,0:6:242:0:0:0,-1.80618,-22.1573 0/0:33:33,0:33:1306:0:0:0,-9.93399,-117.808 dDocent_Contig_11677 18 . G A 6847.78 . AB=0.694805;ABP=104.534;AC=5;AF=0.5;AN=10;AO=219;CIGAR=1X;DP=368;DPB=368;DPRA=0;EPP=478.563;EPPR=326.56;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8731;QR=5925;RO=149;RPL=0;RPP=478.563;RPPR=326.56;RPR=219;RUN=1;SAF=219;SAP=478.563;SAR=0;SRF=149;SRP=326.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:105:24,81:24:941:81:3245:-260.507,0,-53.3811 0/1:152:61,91:61:2423:91:3607:-278.904,0,-172.463 0/1:51:9,42:9:365:42:1678:-135.885,0,-17.8614 0/0:56:55,1:55:2196:1:41:0,-12.7631,-193.719 ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:160:-14.7834,-1.20412,0 dDocent_Contig_11678 19 . G C 292.365 . AB=0.110215;ABP=493.927;AC=2;AF=0.166667;AN=12;AO=62;CIGAR=1X;DP=833;DPB=833;DPRA=1.63077;EPP=137.642;EPPR=1651.26;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.967742;PAIREDR=0.983139;PAO=0;PQA=0;PQR=0;PRO=0;QA=2414;QR=30472;RO=771;RPL=0;RPP=137.642;RPPR=1677.22;RPR=62;RUN=1;SAF=62;SAP=137.642;SAR=0;SRF=768;SRP=1651.26;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:109:108,1:108:4280:1:40:0,-28.8166,-381.182 0/1:187:164,23:164:6473:23:883:-23.4765,0,-526.028 0/0:154:142,12:142:5619:12:457:0,-4.89146,-464.069 0/1:185:167,18:167:6596:18:715:-8.9819,0,-537.678 0/0:107:99,8:99:3924:8:319:0,-3.13348,-324.069 0/0:91:91,0:91:3580:0:0:0,-27.3937,-322.238 dDocent_Contig_11680 121 . A G 251.238 . AB=0.210526;ABP=30.668;AC=4;AF=0.4;AN=10;AO=15;CIGAR=1X;DP=119;DPB=119;DPRA=0;EPP=27.4756;EPPR=228.843;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=3.46945e-18;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=483;QR=3504;RO=104;RPL=0;RPP=35.5824;RPPR=228.843;RPR=15;RUN=1;SAF=14;SAP=27.4756;SAR=1;SRF=0;SRP=228.843;SRR=104;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:20,4:20:669:4:126:-4.42796,0,-53.3001 0/1:14:10,4:10:344:4:136:-8.36155,0,-27.0784 0/0:24:23,1:23:794:1:35:0,-3.72609,-68.2803 0/0:52:51,1:51:1697:1:16:0,-14.0536,-151.411 ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:170:-15.635,-1.50515,0 dDocent_Contig_11681 11 . C A 480.576 . AB=0.201681;ABP=94.9968;AC=2;AF=0.166667;AN=12;AO=35;CIGAR=1X;DP=394;DPB=394;DPRA=1.18376;EPP=79.0118;EPPR=782.569;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.571429;PAIREDR=0.598886;PAO=0;PQA=0;PQR=0;PRO=0;QA=1407;QR=14430;RO=359;RPL=0;RPP=79.0118;RPPR=782.569;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=359;SRP=782.569;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:49:46,3:46:1845:3:121:0,-3.47027,-154.965 0/1:78:62,16:62:2472:16:638:-34.2739,0,-199.135 0/1:41:33,8:33:1328:8:322:-17.0056,0,-107.437 0/0:109:101,8:101:4061:8:326:0,-3.1024,-335.752 0/0:55:55,0:55:2231:0:0:0,-16.5566,-200.945 0/0:62:62,0:62:2493:0:0:0,-18.6639,-224.506 dDocent_Contig_11682 88 . A G 95.7066 . AB=0.169811;ABP=53.2;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=146;DPB=146;DPRA=2.84946;EPP=22.5536;EPPR=300.502;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.934307;PAO=0;PQA=0;PQR=0;PRO=0;QA=297;QR=4788;RO=137;RPL=9;RPP=22.5536;RPPR=300.502;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=137;SRP=300.502;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:4:4,0:4:112:0:0:0,-1.20412,-10.3562 0/0:21:21,0:21:728:0:0:0,-6.32163,-65.8423 0/0:6:6,0:6:212:0:0:0,-1.80618,-19.425 0/0:15:15,0:15:532:0:0:0,-4.51545,-48.2132 0/1:53:44,9:44:1553:9:297:-11.0935,0,-124.109 0/0:47:47,0:47:1651:0:0:0,-14.1484,-148.879 dDocent_Contig_11683 7 . C T 3146.74 . AB=0.308585;ABP=140.176;AC=6;AF=0.5;AN=12;AO=133;CIGAR=1X;DP=431;DPB=431;DPRA=0;EPP=291.816;EPPR=647.938;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.947368;PAIREDR=0.902357;PAO=0;PQA=0;PQR=0;PRO=0;QA=5041;QR=11445;RO=297;RPL=0;RPP=291.816;RPPR=647.938;RPR=133;RUN=1;SAF=133;SAP=291.816;SAR=0;SRF=297;SRP=647.938;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:62:38,23:38:1460:23:877:-60.6206,0,-113.053 0/1:108:94,14:94:3617:14:515:-14.1728,0,-293.137 0/1:83:73,10:73:2830:10:373:-8.93456,0,-229.884 0/1:73:48,25:48:1840:25:963:-65.0091,0,-143.876 0/1:42:15,27:15:581:27:1031:-80.4552,0,-39.9898 0/1:63:29,34:29:1117:34:1282:-96.7036,0,-81.8664 dDocent_Contig_11684 20 . C T 200.899 . AB=0.378378;ABP=7.76406;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=110;DPB=110;DPRA=1;EPP=35.5824;EPPR=176.02;GTI=0;LEN=1;MEANALT=1;MQM=28.4;MQMR=35.3579;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=497;QR=3153;RO=95;RPL=0;RPP=35.5824;RPPR=209.3;RPR=15;RUN=1;SAF=0;SAP=35.5824;SAR=15;SRF=4;SRP=176.02;SRR=91;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:13:13,0:13:406:0:0:0,-3.91339,-35.0299 0/0:18:17,1:17:571:1:27:0,-2.93065,-40.1154 0/1:15:8,7:8:276:7:239:-13.286,0,-15.0858 0/1:22:15,7:15:520:7:231:-10.0257,0,-31.5141 0/0:24:24,0:24:785:0:0:0,-7.22472,-61.635 0/0:18:18,0:18:595:0:0:0,-5.41854,-44.4302 dDocent_Contig_11685 7 . C A 5966.95 . AB=0.284024;ABP=208.426;AC=3;AF=0.25;AN=12;AO=144;CIGAR=1X2M1X5M;DP=562;DPB=562;DPRA=0;EPP=315.702;EPPR=315.702;GTI=0;LEN=1;MEANALT=4.75;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0.993056;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5509;QR=5646;RO=144;RPL=0;RPP=315.702;RPPR=315.702;RPR=144;RUN=1;SAF=144;SAP=315.702;SAR=0;SRF=144;SRP=315.702;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:108:34,18,24,10,21:34:1336:18,24,10,21:683,954,394,831:-68.3144,-22.5476,-127.018,0,-53.8898,-102.667,-46.1342,-100.022,-77.4771,-153.014,-10.161,-64.0502,-41.5041,-87.6375,-113.731 1|0:151:17,49,39,16,30:17:665:49,39,16,30:1864,1543,643,1209:-220.063,-72.3091,-112.232,-98.1957,0,-141.13,-172.193,-73.9952,-99.882,-222.051,-125.527,-27.3297,-53.2154,-127.214,-171.171 0|1:127:36,37,18,13,22:36:1417:37,18,13,22:1419,707,518,886:-105.626,0,-105.428,-58.3153,-58.4191,-169.465,-73.8054,-73.9088,-132.226,-186.461,-43.4372,-43.5412,-101.858,-117.349,-153.384 1|0:121:24,40,12,11,33:24:938:40,12,11,33:1543,477,444,1311:-150.288,-30.8034,-95.8767,-118.241,-68.6463,-191.745,-120.91,-71.3154,-158.754,-194.715,-49.5933,0,-87.4375,-90.1069,-116.776 0|0:27:21,0,0,0,6:21:812:0,0,0,6:0,0,0,243:-14.1198,-20.4414,-87.1177,-20.4414,-87.1177,-87.1177,-20.4414,-87.1177,-87.1177,-87.1177,0,-67.0768,-67.0768,-67.0768,-65.2706 0|0:28:12,0,0,0,16:12:478:0,0,0,16:0,0,0,640:-49.505,-53.1173,-92.4792,-53.1173,-92.4792,-92.4792,-53.1173,-92.4792,-92.4792,-92.4792,0,-39.7605,-39.7605,-39.7605,-34.944 dDocent_Contig_11686 98 . N A 906.665 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=29;CIGAR=1X;DP=29;DPB=29;DPRA=0;EPP=65.983;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=981;QR=0;RO=0;RPL=29;RPP=65.983;RPPR=0;RPR=0;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:12:0,12:0:0:12:408:-37.047,-3.61236,0 1/1:8:0,8:0:0:8:265:-24.174,-2.40824,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:5:0,5:0:0:5:168:-15.4513,-1.50515,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_11687 23 . G A 600.971 . AB=0.425;ABP=4.96463;AC=4;AF=0.333333;AN=12;AO=23;CIGAR=1X;DP=97;DPB=97;DPRA=0.901961;EPP=52.9542;EPPR=163.699;GTI=0;LEN=1;MEANALT=1;MQM=39.4348;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=895;QR=2935;RO=74;RPL=0;RPP=52.9542;RPPR=163.699;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=74;SRP=163.699;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:702:0:0:0,-5.41854,-63.4996 0/0:21:21,0:21:835:0:0:0,-6.32163,-75.4609 0/0:12:12,0:12:474:0:0:0,-3.61236,-43.0073 0/1:22:13,9:13:521:9:344:-22.7155,0,-40.614 1/1:6:0,6:0:0:6:238:-20.1823,-1.80618,0 0/1:18:10,8:10:403:8:313:-20.4212,0,-31.2104 dDocent_Contig_11689 16 . C T 198.104 . AB=0.466667;ABP=3.15506;AC=1;AF=0.125;AN=8;AO=8;CIGAR=2X;DP=101;DPB=101;DPRA=0.422535;EPP=20.3821;EPPR=204.957;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=326;QR=3682;RO=93;RPL=0;RPP=20.3821;RPPR=204.957;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=93;SRP=204.957;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:35:35,0:35:1393:0:0:0,-10.536,-125.625 0|1:15:8,7:8:317:7:285:-21.509,0,-24.3806 0|0:15:14,1:14:556:1:41:0,-0.420883,-46.283 0|0:36:36,0:36:1416:0:0:0,-10.8371,-127.697 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_11690 37 . C T 241.018 . AB=0.234043;ABP=31.8863;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=321;DPB=321;DPRA=0.969325;EPP=37.7539;EPPR=665.309;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.75;PAIREDR=0.744262;PAO=0;PQA=0;PQR=0;PRO=0;QA=631;QR=12222;RO=305;RPL=0;RPP=37.7539;RPPR=665.309;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=305;SRP=665.309;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:50,0:50:1996:0:0:0,-15.0515,-179.837 0/0:59:55,4:55:2222:4:153:0,-3.61933,-185.998 0/0:66:66,0:66:2645:0:0:0,-19.868,-238.172 0/1:47:36,11:36:1444:11:438:-25.6247,0,-116.061 0/0:52:51,1:51:2045:1:40:0,-11.6579,-180.239 0/0:47:47,0:47:1870:0:0:0,-14.1484,-168.508 dDocent_Contig_11691 64 . T C 649.649 . AB=0.395062;ABP=10.7579;AC=5;AF=0.416667;AN=12;AO=33;CIGAR=1X;DP=96;DPB=96;DPRA=0;EPP=74.6689;EPPR=139.813;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.909091;PAIREDR=0.984127;PAO=0;PQA=0;PQR=0;PRO=0;QA=1090;QR=2213;RO=63;RPL=33;RPP=74.6689;RPPR=139.813;RPR=0;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=63;SRP=139.813;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:17:2,15:2:72:15:493:-39.5668,0,-1.71921 0/1:5:3,2:3:106:2:53:-3.52899,0,-8.38395 0/1:19:17,2:17:577:2:63:-0.263204,0,-46.5229 0/0:15:14,1:14:501:1:35:0,-1.01682,-41.9268 0/1:19:13,6:13:451:6:207:-13.2486,0,-35.2014 0/1:21:14,7:14:506:7:239:-15.522,0,-39.5565 dDocent_Contig_11692 199 . G C 1962.93 . AB=0.302632;ABP=28.7251;AC=4;AF=0.333333;AN=12;AO=76;CIGAR=1X;DP=593;DPB=593;DPRA=0.28913;EPP=168.042;EPPR=1125.66;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=59.0445;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.98646;PAO=0;PQA=0;PQR=0;PRO=0;QA=2759;QR=19370;RO=517;RPL=76;RPP=168.042;RPPR=1125.66;RPR=0;RUN=1;SAF=0;SAP=168.042;SAR=76;SRF=0;SRP=1125.66;SRR=517;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:57:4,53:4:154:53:1943:-151.573,-2.92525,0 0/1:61:49,12:49:1870:12:430:-18.95,0,-141.338 0/1:15:4,11:4:143:11:386:-28.9916,0,-8.70394 0/0:15:15,0:15:563:0:0:0,-4.51545,-47.5595 0/0:266:266,0:266:9929:0:0:0,-80.074,-890.262 0/0:179:179,0:179:6711:0:0:0,-53.8844,-598.776 dDocent_Contig_11693 15 . C A 114.378 . AB=0.140845;ABP=82.5596;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=283;DPB=283;DPRA=0.659836;EPP=33.4109;EPPR=587.136;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.866171;PAO=0;PQA=0;PQR=0;PRO=0;QA=541;QR=10782;RO=269;RPL=0;RPP=33.4109;RPPR=587.136;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=269;SRP=587.136;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:37,3:37:1474:3:120:0,-0.85351,-121.716 0/1:40:34,6:34:1375:6:230:-9.02467,0,-111.964 0/1:31:27,4:27:1073:4:162:-5.63482,0,-87.517 0/0:50:49,1:49:1963:1:29:0,-12.1518,-173.963 0/0:53:53,0:53:2105:0:0:0,-15.9546,-189.635 0/0:69:69,0:69:2792:0:0:0,-20.7711,-251.377 dDocent_Contig_11694 16 . T A 6022.96 . AB=0.589744;ABP=22.1081;AC=7;AF=0.583333;AN=12;AO=199;CIGAR=1X;DP=314;DPB=314;DPRA=0;EPP=435.133;EPPR=250.558;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.954774;PAIREDR=0.973684;PAO=0;PQA=0;PQR=0;PRO=0;QA=7818;QR=4588;RO=114;RPL=0;RPP=435.133;RPPR=250.558;RPR=199;RUN=1;SAF=199;SAP=435.133;SAR=0;SRF=114;SRP=250.558;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:46:12,34:12:476:34:1300:-103.421,0,-29.3424 1/1:41:3,38:3:123:38:1491:-122.967,-0.877442,0 0/1:53:17,36:17:694:36:1436:-113.537,0,-46.833 0/1:73:37,35:37:1473:35:1383:-102.701,0,-110.79 0/1:54:33,21:33:1334:21:834:-59.1195,0,-104.065 0/1:47:12,35:12:488:35:1374:-109.771,0,-30.1231 dDocent_Contig_11695 1 . N G 115.527 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=7.37776;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=125;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:125:-11.5524,-1.20412,0 dDocent_Contig_11697 44 . G A 62.0172 . AB=0.118421;ABP=99.1265;AC=3;AF=0.25;AN=12;AO=12;CIGAR=1X;DP=191;DPB=191;DPRA=0.755;EPP=29.068;EPPR=391.704;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.75;PAIREDR=0.636872;PAO=0;PQA=0;PQR=0;PRO=0;QA=485;QR=7077;RO=179;RPL=0;RPP=29.068;RPPR=391.704;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=179;SRP=391.704;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:18,2:18:700:2:80:-1.57119,0,-57.3005 0/0:27:26,1:26:1014:1:41:0,-4.03324,-87.4583 0/1:28:24,4:24:961:4:161:-6.44606,0,-78.3641 0/0:40:40,0:40:1590:0:0:0,-12.0412,-143.333 0/1:28:25,3:25:999:3:122:-2.94365,0,-81.7798 0/0:48:46,2:46:1813:2:81:0,-6.76371,-155.704 dDocent_Contig_11698 78 . A G 1090.44 . AB=0.367347;ABP=10.4997;AC=8;AF=0.666667;AN=12;AO=42;CIGAR=1X1M1X;DP=73;DPB=73;DPRA=0;EPP=94.2121;EPPR=70.3259;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1418;QR=1040;RO=31;RPL=42;RPP=94.2121;RPPR=70.3259;RPR=0;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=31;SRP=70.3259;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:15:11,4:11:369:4:129:-7.41389,0,-29.0194 0|1:7:6,1:6:208:1:35:-1.39142,0,-16.9524 0|1:21:9,12:9:306:12:414:-31.2698,0,-21.5491 0|1:6:5,1:5:157:1:30:-1.19339,0,-12.6339 1|1:23:0,23:0:0:23:776:-70.1546,-6.92369,0 1|1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 dDocent_Contig_11699 9 . T A 11590 . AB=0.511348;ABP=3.84816;AC=5;AF=0.416667;AN=12;AO=383;CIGAR=2M1X2M1X;DP=749;DPB=749;DPRA=0;EPP=834.684;EPPR=619.708;GTI=0;LEN=1;MEANALT=3.66667;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=14944;QR=11059;RO=284;RPL=0;RPP=834.684;RPPR=619.708;RPR=383;RUN=1;SAF=383;SAP=834.684;SAR=0;SRF=284;SRP=619.708;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:97:37,0,0,0,59,0:37:1439:0,0,0,59,0:0,0,0,2290,0:-177,-188.138,-306.394,-188.138,-306.394,-306.394,-188.138,-306.394,-306.394,-306.394,0,-118.245,-118.245,-118.245,-100.485,-188.138,-306.394,-306.394,-306.394,-118.245,-306.394 0|1:257:94,1,0,0,158,0:94:3672:1,0,0,158,0:37,0,0,6167,0:-478.651,-503.921,-805.502,-506.948,-805.803,-808.83,-506.948,-805.803,-808.83,-808.83,0,-298.859,-301.886,-301.886,-254.323,-506.948,-805.803,-808.83,-808.83,-301.886,-808.83 0|1:99:33,0,0,0,66,0:33:1298:0,0,0,66,0:0,0,0,2558,0:-200.595,-210.529,-317.305,-210.529,-317.305,-317.305,-210.529,-317.305,-317.305,-317.305,0,-107.167,-107.167,-107.167,-87.2991,-210.529,-317.305,-317.305,-317.305,-107.167,-317.305 0|1:148:51,0,12,27,57,0:51:1979:0,12,27,57,0:0,453,1052,2231,0:-168.088,-183.441,-346.042,-146.315,-308.916,-305.304,-96.9758,-259.577,-222.452,-251.449,0,-162.603,-125.478,-76.1373,-145.444,-183.441,-346.042,-308.916,-259.577,-162.603,-346.042 0|0:102:54,3,0,0,16,25:54:2100:3,0,0,16,25:102,0,0,632,961:-62.6259,-70.6106,-242.284,-78.8815,-243.187,-251.459,-78.8815,-243.187,-251.459,-251.459,-26.8687,-191.178,-199.451,-199.451,-194.634,0,-164.307,-172.579,-172.579,-120.57,-165.053 0|1:46:15,3,0,0,27,1:15:571:3,0,0,27,1:92,0,0,1066,40:-83.2585,-80.4074,-126.33,-87.7739,-127.233,-134.603,-87.7739,-127.233,-134.603,-134.603,0,-39.5074,-46.8706,-46.8706,-38.7428,-84.4784,-123.938,-131.307,-131.307,-43.5738,-131.006 dDocent_Contig_11701 69 . C A 1035.84 . AB=0.366071;ABP=20.4596;AC=6;AF=0.5;AN=12;AO=41;CIGAR=1X;DP=112;DPB=112;DPRA=0;EPP=92.0407;EPPR=157.185;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.71831;PAO=0;PQA=0;PQR=0;PRO=0;QA=1625;QR=2835;RO=71;RPL=41;RPP=92.0407;RPPR=157.185;RPR=0;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=71;SRP=157.185;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:14,2:14:560:2:81:-2.86925,0,-45.9258 0/1:20:14,6:14:567:6:242:-16.1369,0,-45.3525 0/1:32:14,18:14:537:18:701:-53.7773,0,-39.0233 0/1:28:25,3:25:1009:3:122:-2.94365,0,-82.6747 0/1:11:3,8:3:121:8:319:-25.7652,0,-7.96887 0/1:5:1,4:1:41:4:160:-13.2783,0,-2.58942 dDocent_Contig_11702 195 . T C 328.62 . AB=0.175;ABP=113.104;AC=1;AF=0.125;AN=8;AO=21;CIGAR=1X;DP=313;DPB=313;DPRA=1.86528;EPP=48.6112;EPPR=637.08;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.996575;PAO=0;PQA=0;PQR=0;PRO=0;QA=782;QR=11462;RO=292;RPL=21;RPP=48.6112;RPPR=637.08;RPR=0;RUN=1;SAF=0;SAP=48.6112;SAR=21;SRF=0;SRP=637.08;SRR=292;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:71:71,0:71:2817:0:0:0,-21.3731,-253.648 0/0:68:68,0:68:2612:0:0:0,-20.47,-235.21 0/0:54:54,0:54:2130:0:0:0,-16.2556,-191.879 0/1:120:99,21:99:3903:21:782:-34.5609,0,-315.155 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11703 13 . A C 694.26 . AB=0.0484848;ABP=295.185;AC=5;AF=0.416666;AN=12;AO=8;CIGAR=1X5M1X;DP=295;DPB=295;DPRA=0;EPP=20.3821;EPPR=419.933;GTI=0;LEN=1;MEANALT=5;MQM=56;MQMR=59.0469;NS=6;NUMALT=6;ODDS=0;PAIRED=0;PAIREDR=0.59375;PAO=0;PQA=0;PQR=0;PRO=0;QA=323;QR=7466;RO=192;RPL=0;RPP=20.3821;RPPR=419.933;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=192;SRP=419.933;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:47:24,0,3,9,6,0,3:24:924:0,3,9,6,0,3:0,120,342,244,0,119:-20.1,-27.3247,-103.187,-17.8209,-93.6828,-92.7797,0,-75.8556,-66.3519,-73.1463,-7.23273,-83.0986,-73.5944,-55.7673,-81.2924,-27.3247,-103.187,-93.6828,-75.8556,-83.0986,-103.187,-17.5276,-93.3904,-83.8863,-66.0593,-73.3019,-93.3904,-92.4873 0|1:61:39,0,1,13,0,0,3:39:1524:0,1,13,0,0,3:0,40,436,0,0,110:-20.4495,-32.1897,-155.9,-29.0193,-152.732,-152.431,0,-123.689,-120.521,-119.775,-32.1897,-155.9,-152.732,-123.689,-155.9,-32.1897,-155.9,-152.732,-123.689,-155.9,-155.9,-23.1948,-146.911,-143.742,-114.7,-146.911,-146.911,-146.008 0|1:50:37,0,0,8,1,0,2:37:1416:0,0,8,1,0,2:0,0,278,40,0,72:-9.50798,-20.6461,-136.865,-20.6461,-136.865,-136.865,0,-116.189,-116.189,-113.781,-17.3524,-133.575,-133.575,-112.899,-133.274,-20.6461,-136.865,-136.865,-116.189,-133.575,-136.865,-14.7687,-130.99,-130.99,-110.315,-127.701,-130.99,-130.388 0|1:68:50,7,0,5,1,0,0:50:1947:7,0,5,1,0,0:273,0,186,39,0,0:-7.39039,0,-156.314,-22.4419,-158.421,-180.862,-7.7696,-143.741,-166.181,-164.676,-19.2405,-155.22,-177.661,-162.98,-177.36,-22.4419,-158.421,-180.862,-166.181,-177.661,-180.862,-22.4419,-158.421,-180.862,-166.181,-177.661,-180.862,-180.862 0|0:27:19,0,0,4,0,3,0:19:754:0,0,4,0,3,0:0,0,136,0,121,0:-4.28281,-10.0024,-72.1016,-10.0024,-72.1016,-72.1016,-0.0959615,-62.1621,-62.1621,-60.958,-10.0024,-72.1016,-72.1016,-62.1621,-72.1016,0,-62.1251,-62.1251,-52.187,-62.1251,-61.222,-10.0024,-72.1016,-72.1016,-62.1621,-72.1016,-62.1251,-72.1016 0|1:42:23,0,2,9,0,0,6:23:901:0,2,9,0,0,6:0,81,323,0,0,236:-18.8623,-25.786,-99.8616,-20.9512,-95.0233,-94.4212,0,-74.0717,-69.2351,-71.3625,-25.786,-99.8616,-95.0233,-74.0717,-99.8616,-25.786,-99.8616,-95.0233,-74.0717,-99.8616,-99.8616,-6.41427,-80.5004,-75.6627,-54.7115,-80.5004,-80.5004,-78.6942 dDocent_Contig_11704 115 . T C 379.387 . AB=0.152542;ABP=64.8789;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X2M1X1M1X;DP=112;DPB=112;DPRA=1.32812;EPP=26.8965;EPPR=174.557;GTI=0;LEN=1;MEANALT=2.75;MQM=59.0909;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.727273;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=363;QR=2723;RO=79;RPL=0;RPP=26.8965;RPPR=174.557;RPR=11;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=174.557;SRR=79;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:26:22,2,2,0:22:750:2,2,0:69,72,0:0,-1.02441,-61.258,-0.74035,-55.9836,-60.9877,-6.62266,-61.8601,-61.5897,-67.466 0|1:43:32,6,1,3:32:1105:6,1,3:207,28,106:-7.18942,0,-87.9818,-14.6097,-87.571,-104.087,-8.18477,-81.1543,-95.7545,-97.0686 0|0:11:7,0,4,0:7:245:0,4,0:0,141,0:-9.72577,-11.833,-31.7655,0,-20.284,-19.0799,-11.833,-31.7655,-20.284,-31.7655 0|0:16:15,0,1,0:15:519:0,1,0:0,36,0:0,-4.51545,-46.6799,-1.2182,-43.7416,-43.4406,-4.51545,-46.6799,-43.7416,-46.6799 1|0:9:0,1,7,0:0:0:1,7,0:35,244,0:-22.6841,-19.8473,-19.5462,-2.8387,0,-0.731493,-22.6841,-19.8473,-2.8387,-22.6841 0|0:7:3,2,2,0:3:104:2,2,0:52,64,0:-4.28304,-1.13942,-9.00681,0,-4.46338,-7.90337,-5.18613,-9.60887,-8.50543,-13.6639 dDocent_Contig_11705 22 . C G 48.1435 . AB=0.125;ABP=51.8684;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=268;DPB=268;DPRA=0.928962;EPP=16.0391;EPPR=565.422;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=0.787645;PAO=0;PQA=0;PQR=0;PRO=0;QA=240;QR=10411;RO=259;RPL=0;RPP=16.0391;RPPR=565.422;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=259;SRP=565.422;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:44,0:44:1775:0:0:0,-13.2453,-159.96 0/0:45:42,1:42:1705:1:40:0,-9.34983,-149.667 0/0:31:30,0:30:1208:0:0:0,-9.0309,-108.885 0/1:40:35,5:35:1388:5:200:-6.33722,0,-113.133 0/0:52:52,0:52:2093:0:0:0,-15.6536,-188.552 0/0:56:56,0:56:2242:0:0:0,-16.8577,-201.944 dDocent_Contig_11706 51 . T C 48.6481 . AB=0.5;ABP=3.0103;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=1X;DP=90;DPB=90;DPRA=0.232558;EPP=7.35324;EPPR=189.757;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=80;QR=3260;RO=86;RPL=2;RPP=7.35324;RPPR=189.757;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=86;SRP=189.757;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:8:7,0:7:260:0:0:0,-2.10721,-23.6122 0/0:16:16,0:16:625:0:0:0,-4.81648,-56.5884 0/1:4:2,2:2:80:2:80:-6.38767,0,-6.38745 0/0:14:14,0:14:508:0:0:0,-4.21442,-46.0464 0/0:28:27,0:27:1021:0:0:0,-8.12781,-91.8231 0/0:20:20,0:20:766:0:0:0,-6.0206,-69.2665 dDocent_Contig_11707 9 . T G 119.904 . AB=0.230769;ABP=19.3799;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=170;DPB=170;DPRA=0.902778;EPP=16.0391;EPPR=359.132;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=233;QR=6284;RO=164;RPL=0;RPP=16.0391;RPPR=359.132;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=164;SRP=359.132;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1039:0:0:0,-8.12781,-93.8181 0/0:18:18,0:18:670:0:0:0,-5.41854,-60.6261 0/0:41:41,0:41:1585:0:0:0,-12.3422,-142.916 0/0:35:35,0:35:1334:0:0:0,-10.536,-120.347 0/0:23:23,0:23:890:0:0:0,-6.92369,-80.4197 0/1:26:20,6:20:766:6:233:-13.5133,0,-61.4407 dDocent_Contig_11708 31 . A G 102.898 . AB=0.194444;ABP=32.2045;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=188;DPB=188;DPRA=1.10744;EPP=22.5536;EPPR=391.704;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.849162;PAO=0;PQA=0;PQR=0;PRO=0;QA=319;QR=7040;RO=179;RPL=0;RPP=22.5536;RPPR=391.704;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=179;SRP=391.704;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:1006:0:0:0,-7.82678,-90.8354 0/0:40:40,0:40:1598:0:0:0,-12.0412,-144.058 0/0:31:29,2:29:1154:2:71:0,-2.5925,-97.4037 0/0:21:21,0:21:822:0:0:0,-6.32163,-74.2966 0/0:34:34,0:34:1331:0:0:0,-10.235,-120.053 0/1:36:29,7:29:1129:7:248:-11.8127,0,-91.0631 dDocent_Contig_11710 23 . C A 5105.81 . AB=0.407692;ABP=12.6316;AC=8;AF=0.666667;AN=12;AO=157;CIGAR=1X2M;DP=239;DPB=239;DPRA=0;EPP=326.781;EPPR=161.528;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.866242;PAIREDR=0.958904;PAO=0;PQA=0;PQR=0;PRO=0;QA=6196;QR=2826;RO=73;RPL=0;RPP=343.931;RPPR=161.528;RPR=157;RUN=1;SAF=155;SAP=326.781;SAR=2;SRF=73;SRP=161.528;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:32:17,1,14:17:664:1,14:41,545:-39.8041,-43.0803,-97.3655,0,-52.8853,-50.5137 0|1:42:28,3,10:28:1071:3,10:123,367:-21.5325,-19.8092,-106.793,0,-77.7103,-84.8462 0|1:31:17,0,14:17:669:0,14:0,564:-41.771,-46.8885,-101.914,0,-55.4241,-51.2097 0|1:25:10,0,15:10:391:0,15:0,578:-44.8156,-47.8259,-79.9719,0,-32.5343,-28.0189 1|1:45:1,0,44:1:31:0,44:0,1745:-154.158,-154.459,-156.945,-10.4469,-13.2453,0 1|1:64:0,4,60:0:0:4,60:164,2397:-215.721,-211.546,-210.342,-18.0618,-13.7208,0 dDocent_Contig_11711 115 . A T 707.241 . AB=0.230159;ABP=82.6999;AC=4;AF=0.333333;AN=12;AO=35;CIGAR=1X4M1X5M;DP=257;DPB=258.182;DPRA=0.769811;EPP=79.0118;EPPR=400.39;GTI=0;LEN=1;MEANALT=3.8;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0;PAIREDR=0.983607;PAO=0;PQA=0;PQR=0;PRO=0;QA=1129;QR=5591;RO=183;RPL=0;RPP=79.0118;RPPR=400.39;RPR=35;RUN=1;SAF=0;SAP=79.0118;SAR=35;SRF=0;SRP=400.39;SRR=183;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:53:48,1,3,0,0:48:1429:1,3,0,0:34,39,0,0:0,-11.6999,-125.725,-12.686,-124.213,-126.012,-14.4494,-126.026,-126.915,-128.728,-14.4494,-126.026,-126.915,-128.728,-128.728 0|0:72:57,4,4,1,0:57:1770:4,4,1,0:135,52,35,0:0,-6.37143,-147.446,-14.7505,-146.23,-155.755,-14.2978,-145.802,-154.111,-156.231,-17.1587,-148.65,-156.959,-156.532,-159.38 0|1:83:57,0,9,15,0:57:1735:0,9,15,0:0,120,484,0:-21.9912,-39.1499,-178.154,-33.4846,-172.44,-169.73,0,-139.111,-133.401,-134.596,-39.1499,-178.154,-172.44,-139.111,-178.154 0|1:35:21,0,1,13,0:21:657:0,1,13,0:0,13,411,0:-26.9445,-33.2661,-86.0686,-32.6735,-85.4667,-85.1657,0,-52.9974,-52.399,-49.084,-33.2661,-86.0686,-85.4667,-52.9974,-86.0686 0|0:8:0,3,0,1,4:0:0:3,0,1,4:97,0,29,69:-11.6925,-3.83064,-2.92755,-11.6925,-3.83064,-11.6925,-9.37512,-1.49261,-9.37512,-9.07409,-7.83005,0,-7.83005,-5.52953,-6.62593 1|1:6:0,0,0,5,0:0:0:0,0,5,0:0,0,170,0:-15.3069,-15.3069,-15.3069,-15.3069,-15.3069,-15.3069,-1.50515,-1.50515,-1.50515,0,-15.3069,-15.3069,-15.3069,-1.50515,-15.3069 dDocent_Contig_11712 14 . T C 152.602 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=4;CIGAR=1X;DP=525;DPB=525;DPRA=0.0383877;EPP=11.6962;EPPR=1134.35;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=160;QR=20792;RO=521;RPL=0;RPP=11.6962;RPPR=1134.35;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=521;SRP=1134.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:127:127,0:127:5102:0:0:0,-38.2308,-459.037 0/0:154:154,0:154:6161:0:0:0,-46.3586,-554.253 0/0:86:86,0:86:3424:0:0:0,-25.8886,-308.201 0/0:151:151,0:151:5982:0:0:0,-45.4555,-538.167 1/1:4:0,4:0:0:4:160:-14.7829,-1.20412,0 0/0:3:3,0:3:123:0:0:0,-0.90309,-11.4648 dDocent_Contig_11713 58 . A G 95.814 . AB=0.133333;ABP=73.0765;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=326;DPB=326;DPRA=1.12782;EPP=20.3821;EPPR=693.539;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.375;PAIREDR=0.45283;PAO=0;PQA=0;PQR=0;PRO=0;QA=320;QR=12352;RO=318;RPL=8;RPP=20.3821;RPPR=693.539;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=318;SRP=693.539;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:45:45,0:45:1713:0:0:0,-13.5463,-154.399 0/0:49:49,0:49:1946:0:0:0,-14.7505,-175.34 0/0:42:42,0:42:1637:0:0:0,-12.6433,-147.557 0/0:69:69,0:69:2710:0:0:0,-20.7711,-244.034 0/1:60:52,8:52:2022:8:320:-11.1043,0,-164.118 0/0:61:61,0:61:2324:0:0:0,-18.3628,-209.335 dDocent_Contig_11714 149 . T A 6191.05 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=197;CIGAR=1X2M1X2M1X2M1X;DP=202;DPB=202;DPRA=0;EPP=430.79;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=40.066;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=7255;QR=0;RO=0;RPL=0;RPP=430.79;RPPR=0;RPR=197;RUN=1;SAF=0;SAP=430.79;SAR=197;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:17:0,17:0:0:17:629:-54.161,-5.11751,0 1|1:99:0,98:0:0:98:3581:-306.469,-29.5009,0 1|1:78:0,75:0:0:75:2782:-235.3,-22.5773,0 1|1:8:0,7:0:0:7:263:-22.5736,-2.10721,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_11715 86 . G A 521.087 . AB=0.166667;ABP=252.006;AC=3;AF=0.25;AN=12;AO=47;CIGAR=1X;DP=458;DPB=458;DPRA=1.03691;EPP=105.07;EPPR=895.485;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.446809;PAIREDR=0.717762;PAO=0;PQA=0;PQR=0;PRO=0;QA=1631;QR=14283;RO=411;RPL=28;RPP=6.75262;RPPR=5.80521;RPR=19;RUN=1;SAF=28;SAP=6.75262;SAR=19;SRF=217;SRP=5.80521;SRR=194;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:51:47,4:47:1624:4:142:0,-2.22341,-133.315 0/1:100:81,19:81:2746:19:655:-29.1668,0,-217.274 0/1:74:66,8:66:2315:8:281:-3.3533,0,-186.329 0/1:84:68,16:68:2385:16:553:-24.8072,0,-189.616 0/0:77:77,0:77:2668:0:0:0,-23.1793,-240.358 0/0:72:72,0:72:2545:0:0:0,-21.6742,-229.297 dDocent_Contig_11716 23 . C T 784.971 . AB=0.315789;ABP=14.2105;AC=7;AF=0.583333;AN=12;AO=26;CIGAR=2X;DP=73;DPB=73;DPRA=0.495238;EPP=59.4686;EPPR=105.07;GTI=0;LEN=1;MEANALT=1;MQM=53;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1041;QR=1865;RO=47;RPL=0;RPP=59.4686;RPPR=105.07;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=47;SRP=105.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:9:7,2:7:281:2:80:-4.85038,0,-22.9527 0|1:20:14,6:14:551:6:241:-15.9443,0,-43.9081 0|0:21:21,0:21:831:0:0:0,-6.32163,-75.1022 0|1:9:5,4:5:202:4:159:-11.9195,0,-15.8522 1|1:9:0,9:0:0:9:360:-32.618,-2.70927,0 1|1:5:0,5:0:0:5:201:-18.3867,-1.50515,0 dDocent_Contig_11717 81 . G T 188.321 . AB=0.0952381;ABP=32.8939;AC=1;AF=0.125;AN=8;AO=2;CIGAR=1X3M1X;DP=68;DPB=68;DPRA=2;EPP=7.35324;EPPR=128.956;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=72;QR=2131;RO=58;RPL=2;RPP=7.35324;RPPR=128.956;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=58;SRP=128.956;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:14:14,0,0:14:526:0,0:0,0:0,-4.21442,-47.6841,-4.21442,-47.6841,-47.6841 0|1:21:19,2,0:19:695:2,0:72,0:-0.515093,0,-56.557,-6.23466,-57.159,-63.0333 0|0:26:18,0,8:18:674:0,8:0,311:-20.5275,-25.9461,-81.1313,0,-55.5693,-53.161 0|0:7:7,0,0:7:236:0,0:0,0:0,-2.10721,-21.5626,-2.10721,-21.5626,-21.5626 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_11718 72 . G T 358.079 . AB=0.223301;ABP=71.5066;AC=2;AF=0.25;AN=8;AO=24;CIGAR=1X;DP=157;DPB=157;DPRA=1.94203;EPP=55.1256;EPPR=291.816;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=803;QR=4185;RO=133;RPL=24;RPP=55.1256;RPPR=291.816;RPR=0;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=133;SRP=291.816;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:53:40,13:40:1265:13:444:-24.3328,0,-98.1838 0/0:31:30,1:30:954:1:30:0,-6.33236,-83.1561 0/1:50:40,10:40:1221:10:329:-14.8731,0,-95.1191 0/0:23:23,0:23:745:0:0:0,-6.92369,-67.3541 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11719 35 . A G 69.8133 . AB=0.119048;ABP=108.895;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=189;DPB=189;DPRA=1.6;EPP=24.725;EPPR=391.704;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.972067;PAO=0;PQA=0;PQR=0;PRO=0;QA=378;QR=7070;RO=179;RPL=0;RPP=24.725;RPPR=391.704;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=179;SRP=391.704;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:45:41,4:41:1595:4:157:-0.962453,0,-130.243 0/0:30:30,0:30:1205:0:0:0,-9.0309,-108.727 0/1:39:33,6:33:1311:6:221:-8.49762,0,-106.519 0/0:36:36,0:36:1419:0:0:0,-10.8371,-127.966 0/0:20:20,0:20:782:0:0:0,-6.0206,-70.6993 0/0:19:19,0:19:758:0:0:0,-5.71957,-68.5405 dDocent_Contig_11720 10 . C G 140.636 . AB=0.176471;ABP=49.3776;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=2X;DP=157;DPB=157;DPRA=0.962264;EPP=22.5536;EPPR=324.388;GTI=0;LEN=1;MEANALT=1;MQM=52.4444;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0;PAIREDR=0.972973;PAO=0;PQA=0;PQR=0;PRO=0;QA=356;QR=5890;RO=148;RPL=0;RPP=22.5536;RPPR=324.388;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=148;SRP=324.388;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:26:23,3:23:922:3:114:-2.74249,0,-75.4582 0|0:37:37,0:37:1496:0:0:0,-11.1381,-134.882 0|0:17:17,0:17:672:0:0:0,-5.11751,-60.8084 0|0:39:39,0:39:1535:0:0:0,-11.7402,-138.4 0|0:13:13,0:13:504:0:0:0,-3.91339,-45.7009 0|1:25:19,6:19:761:6:242:-14.53,0,-61.2867 dDocent_Contig_11721 19 . C T 85.4282 . AB=0.118421;ABP=99.1265;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=419;DPB=419;DPRA=1.00358;EPP=31.2394;EPPR=884.628;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.846154;PAIREDR=0.990148;PAO=0;PQA=0;PQR=0;PRO=0;QA=524;QR=16326;RO=406;RPL=0;RPP=31.2394;RPPR=884.628;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=406;SRP=884.628;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:64:60,4:60:2401:4:162:0,-4.29917,-201.267 0/0:106:106,0:106:4242:0:0:0,-31.9092,-381.735 0/0:46:46,0:46:1861:0:0:0,-13.8474,-167.69 0/1:76:67,9:67:2691:9:362:-10.0657,0,-219.423 0/0:54:54,0:54:2191:0:0:0,-16.2556,-197.35 0/0:73:73,0:73:2940:0:0:0,-21.9752,-264.68 dDocent_Contig_11722 81 . C G 991.698 . AB=0.232759;ABP=146.927;AC=5;AF=0.416667;AN=12;AO=57;CIGAR=1X;DP=278;DPB=278;DPRA=0;EPP=3.0484;EPPR=482.906;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.755656;PAO=0;PQA=0;PQR=0;PRO=0;QA=2054;QR=8183;RO=221;RPL=57;RPP=126.784;RPPR=3.09873;RPR=0;RUN=1;SAF=29;SAP=3.0484;SAR=28;SRF=109;SRP=3.09873;SRR=112;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:26,6:26:970:6:224:-10.8858,0,-77.9745 0/1:82:66,16:66:2463:16:577:-27.5766,0,-197.178 0/1:37:29,8:29:1044:8:277:-14.1278,0,-83.1192 0/0:46:43,3:43:1594:3:99:0,-4.61199,-134.479 0/1:29:26,3:26:949:3:109:-1.4377,0,-76.9862 0/1:52:31,21:31:1163:21:768:-53.7821,0,-89.3051 dDocent_Contig_11723 15 . A T 107.949 . AB=0.142857;ABP=65.0524;AC=2;AF=0.166667;AN=12;AO=19;CIGAR=1X;DP=468;DPB=468;DPRA=7.6;EPP=44.2683;EPPR=975.83;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.894737;PAIREDR=0.203125;PAO=0;PQA=0;PQR=0;PRO=0;QA=759;QR=17877;RO=448;RPL=0;RPP=44.2683;RPPR=975.83;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=448;SRP=975.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:55:53,2:53:2130:2:82:0,-8.77697,-184.093 0/1:33:27,6:27:1075:6:243:-12.3136,0,-87.1081 0/0:12:12,0:12:480:0:0:0,-3.61236,-43.5502 0/1:23:21,2:21:825:2:81:-0.762044,0,-67.6323 0/0:251:247,3:247:9861:3:120:0,-64.2451,-875.761 0/0:94:88,6:88:3506:6:233:0,-6.95929,-294.235 dDocent_Contig_11725 29 . T C 331.684 . AB=0.283019;ABP=24.6841;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=174;DPB=174;DPRA=1.04706;EPP=37.7539;EPPR=295.967;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5625;PAIREDR=0.443038;PAO=0;PQA=0;PQR=0;PRO=0;QA=613;QR=5999;RO=158;RPL=0;RPP=37.7539;RPPR=346.103;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=152;SRP=295.967;SRR=6;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1248:0:0:0,-9.93399,-112.607 0/0:36:35,1:35:1333:1:40:0,-6.8414,-116.253 0/0:19:19,0:19:710:0:0:0,-5.71957,-64.2219 0/0:33:33,0:33:1246:0:0:0,-9.93399,-112.421 0/1:19:17,2:17:642:2:78:-1.68373,0,-52.3898 0/1:34:21,13:21:820:13:495:-34.6577,0,-63.8833 dDocent_Contig_11728 111 . T A 573.599 . AB=0.22973;ABP=49.9611;AC=3;AF=0.3;AN=10;AO=26;CIGAR=1X3M1X;DP=177;DPB=177;DPRA=1.32447;EPP=59.4686;EPPR=326.56;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=892;QR=5025;RO=149;RPL=0;RPP=59.4686;RPPR=326.56;RPR=26;RUN=1;SAF=0;SAP=59.4686;SAR=26;SRF=0;SRP=326.56;SRR=149;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:64:63,0:63:2105:0:0:0,-18.9649,-189.379 0|0:23:22,0:22:746:0:0:0,-6.62266,-67.3733 0|0:7:7,0:7:239:0:0:0,-2.10721,-21.8438 0|1:74:57,17:57:1935:17:585:-30.6992,0,-152.151 .:.:.:.:.:.:.:. 1|1:9:0,9:0:0:9:307:-27.9617,-2.70927,0 dDocent_Contig_11729 119 . T A 133.238 . AB=0.44;ABP=4.57376;AC=3;AF=0.25;AN=12;AO=33;CIGAR=1X;DP=193;DPB=193;DPRA=0;EPP=74.6689;EPPR=350.446;GTI=0;LEN=1;MEANALT=1;MQM=16.8182;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.975;PAO=0;PQA=0;PQR=0;PRO=0;QA=1153;QR=5395;RO=160;RPL=0;RPP=74.6689;RPPR=350.446;RPR=33;RUN=1;SAF=0;SAP=74.6689;SAR=33;SRF=0;SRP=350.446;SRR=160;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:12,10:12:400:10:348:-8.78291,0,-29.6986 0/0:38:33,5:33:1093:5:175:0,-3.64993,-90.8789 0/0:44:40,4:40:1330:4:140:0,-6.98009,-113.726 0/0:61:59,2:59:2017:2:70:0,-15.2392,-178.681 0/1:7:4,3:4:138:3:105:-2.63405,0,-10.6532 0/1:21:12,9:12:417:9:315:-7.11217,0,-31.5417 dDocent_Contig_11730 48 . C A 1300.26 . AB=0.346667;ABP=33.6425;AC=5;AF=0.416667;AN=12;AO=52;CIGAR=1X1M;DP=157;DPB=157;DPRA=4.28571;EPP=115.927;EPPR=226.672;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.865385;PAIREDR=0.970874;PAO=0;PQA=0;PQR=0;PRO=0;QA=2027;QR=3992;RO=103;RPL=0;RPP=115.927;RPPR=226.672;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=103;SRP=226.672;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:26:12,2,12:12:456:2,12:79,463:-34.3969,-31.507,-68.2862,0,-30.8683,-33.759 0|1:42:30,0,12:30:1170:0,12:0,470:-29.9969,-39.0278,-135.187,0,-96.5504,-92.938 0|1:32:13,0,19:13:500:0,19:0,733:-56.6525,-60.5659,-101.608,0,-41.4263,-35.7067 0|1:41:35,0,6:35:1360:0,6:0,241:-9.72357,-20.2596,-131.984,0,-112.124,-110.318 0|0:7:7,0,0:7:268:0,0:0,0:0,-2.10721,-24.4812,-2.10721,-24.4812,-24.4812 0|1:9:6,0,3:6:238:0,3:0,120:-8.47804,-10.2842,-29.8721,0,-19.9864,-19.0833 dDocent_Contig_11731 118 . T C 99.9416 . AB=0.166667;ABP=78.288;AC=4;AF=0.333333;AN=12;AO=13;CIGAR=1X;DP=93;DPB=93;DPRA=2.6;EPP=31.2394;EPPR=172.385;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=414;QR=2381;RO=78;RPL=0;RPP=31.2394;RPPR=172.385;RPR=13;RUN=1;SAF=0;SAP=31.2394;SAR=13;SRF=0;SRP=172.385;SRR=78;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:2:2,0:2:68:0:0:0,-0.60206,-6.45788 0/0:13:13,0:13:406:0:0:0,-3.91339,-36.8422 0/1:7:5,2:5:164:2:66:-4.16097,0,-12.9761 0/1:14:12,2:12:371:2:66:-2.05376,0,-29.4748 0/1:42:37,4:37:1139:4:138:-0.069301,0,-90.1004 0/1:15:9,5:9:233:5:144:-8.94029,0,-16.9396 dDocent_Contig_11732 128 . A T 1644.75 . AB=0.330435;ABP=60.4505;AC=6;AF=0.5;AN=12;AO=76;CIGAR=2M1X4M;DP=230;DPB=228;DPRA=0;EPP=168.042;EPPR=313.531;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.657895;PAIREDR=0.741259;PAO=0;PQA=0;PQR=0;PRO=0;QA=2684;QR=5039;RO=143;RPL=0;RPP=168.042;RPPR=313.531;RPR=76;RUN=1;SAF=0;SAP=168.042;SAR=76;SRF=0;SRP=313.531;SRR=143;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:20:15,2,3:15:524:2,3:72,108:-4.2968,-2.93742,-44.9505,0,-36.7385,-41.7115 0|1:33:16,1,16:16:564:1,16:34,570:-41.6589,-43.7184,-89.3359,0,-43.1748,-41.1156 0|1:31:19,0,11:19:676:0,11:0,393:-26.3205,-32.0401,-87.1323,0,-55.0893,-51.778 0|1:43:27,4,12:27:939:4,12:124,417:-25.8027,-23.9881,-99.1287,0,-66.4305,-72.765 0|1:55:43,0,10:43:1526:0,10:0,348:-15.3419,-28.2862,-152.624,0,-124.33,-121.319 0|1:48:23,0,24:23:810:0,24:0,848:-62.2754,-69.1991,-135.145,0,-66.0799,-58.8552 dDocent_Contig_11733 30 . G A 488.042 . AB=0.301587;ABP=24.5527;AC=1;AF=0.0833333;AN=12;AO=24;CIGAR=1X;DP=431;DPB=431;DPRA=0.99537;EPP=55.1256;EPPR=886.8;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.960688;PAO=0;PQA=0;PQR=0;PRO=0;QA=952;QR=16128;RO=407;RPL=0;RPP=55.1256;RPPR=886.8;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=407;SRP=886.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:63:44,19:44:1751:19:763:-50.0261,0,-138.844 0/0:105:101,4:101:4020:4:149:0,-17.8399,-348.019 0/0:47:46,1:46:1840:1:40:0,-10.1527,-161.812 0/0:61:61,0:61:2386:0:0:0,-18.3628,-214.908 0/0:90:90,0:90:3566:0:0:0,-27.0927,-320.978 0/0:65:65,0:65:2565:0:0:0,-19.5669,-230.99 dDocent_Contig_11737 13 . T C 235.536 . AB=0.255814;ABP=25.2805;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=2X;DP=114;DPB=114;DPRA=1.21127;EPP=26.8965;EPPR=226.672;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.272727;PAIREDR=0.378641;PAO=0;PQA=0;PQR=0;PRO=0;QA=433;QR=4048;RO=103;RPL=0;RPP=26.8965;RPPR=226.672;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=103;SRP=226.672;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:27:19,8:19:738:8:312:-20.312,0,-58.6175 0|0:23:23,0:23:915:0:0:0,-6.92369,-82.6557 0|0:18:18,0:18:682:0:0:0,-5.41854,-61.697 0|0:22:22,0:22:867:0:0:0,-6.62266,-78.3424 0|0:8:8,0:8:323:0:0:0,-2.40824,-29.4375 0|1:16:13,3:13:523:3:121:-6.46351,0,-42.6012 dDocent_Contig_11739 91 . T A 7650.33 . AB=0.280864;ABP=273.292;AC=8;AF=0.666667;AN=12;AO=295;CIGAR=1X;DP=761;DPB=761;DPRA=0;EPP=643.595;EPPR=1014.92;GTI=0;LEN=1;MEANALT=1;MQM=58.6508;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0983051;PAIREDR=0.972103;PAO=0;PQA=0;PQR=0;PRO=0;QA=10784;QR=15914;RO=466;RPL=0;RPP=643.595;RPPR=1014.92;RPR=295;RUN=1;SAF=295;SAP=643.595;SAR=0;SRF=466;SRP=1014.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:97:73,24:73:2470:24:884:-50.6517,0,-193.358 0/1:164:102,62:102:3466:62:2251:-150.723,0,-262.798 0/1:239:202,37:202:6904:37:1361:-49.2779,0,-549.53 0/1:148:89,59:89:3074:59:2160:-149.682,0,-232.349 1/1:49:0,49:0:0:49:1786:-161.016,-14.7505,0 1/1:64:0,64:0:0:64:2342:-210.904,-19.2659,0 dDocent_Contig_11740 7 . C T 315.831 . AB=0.190476;ABP=55.4358;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1M2X1M;DP=254;DPB=249.5;DPRA=1.36111;EPP=31.2394;EPPR=504.62;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.735931;PAO=0;PQA=0;PQR=0;PRO=0;QA=499;QR=8853;RO=231;RPL=0;RPP=31.2394;RPPR=504.62;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=231;SRP=504.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:48:39,9,0:39:1494:9,0:344,0:-11.9294,0,-120.288,-23.6695,-122.997,-146.334 0|0:33:33,0,0:33:1270:0,0:0,0:0,-9.93399,-114.593,-9.93399,-114.593,-114.593 0|0:35:34,0,1:34:1311:0,1:0,38:0,-10.235,-117.9,-6.73878,-114.783,-114.482 0|1:63:51,0,12:51:1946:0,12:0,461:-22.8756,-38.2282,-197.877,0,-160.032,-156.419 0|0:40:40,0,0:40:1528:0,0:0,0:0,-12.0412,-137.795,-12.0412,-137.795,-137.795 0|0:35:34,0,0:34:1304:0,0:0,0:0,-10.235,-117.26,-10.235,-117.26,-117.26 dDocent_Contig_11741 98 . N C 216.271 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=7;CIGAR=2X;DP=8;DPB=16;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=16;PQA=557;PQR=0;PRO=0;QA=230;QR=0;RO=0;RPL=7;RPP=18.2106;RPPR=0;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:2:0,1:0:0:1:31:-2.78119,-0.30103,0 1|1:2:0,2:0:0:2:70:-6.29785,-0.60206,0 1|1:1:0,1:0:0:1:24:-2.39989,-0.30103,0 1|1:1:0,1:0:0:1:35:-3.14877,-0.30103,0 .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:70:-6.2981,-0.60206,0 dDocent_Contig_11742 18 . A G 523.575 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=15;CIGAR=1X;DP=15;DPB=15;DPRA=0;EPP=35.5824;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=608;QR=0;RO=0;RPL=0;RPP=35.5824;RPPR=0;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:5:0,5:0:0:5:204:-17.1888,-1.50515,0 1/1:2:0,2:0:0:2:81:-7.07285,-0.60206,0 1/1:5:0,5:0:0:5:201:-17.0481,-1.50515,0 1/1:3:0,3:0:0:3:122:-10.4451,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11743 9 . T G 285.304 . AB=0.166667;ABP=95.6598;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X1M1X;DP=192;DPB=192;DPRA=1;EPP=37.7539;EPPR=361.303;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.1875;PAIREDR=0.472727;PAO=0;PQA=0;PQR=0;PRO=0;QA=616;QR=6452;RO=165;RPL=0;RPP=37.7539;RPPR=361.303;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=165;SRP=361.303;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:20:14,4,2:14:557:4,2:156,81:-8.59832,0,-44.6532,-6.12862,-39.1773,-51.3962 0|0:46:46,0,0:46:1791:0,0:0,0:0,-13.8474,-161.427,-13.8474,-161.427,-161.427 0|0:7:7,0,0:7:280:0,0:0,0:0,-2.10721,-25.5723,-2.10721,-25.5723,-25.5723 0|0:43:41,0,2:41:1606:0,2:0,82:0,-12.3422,-144.381,-5.16461,-137.612,-137.01 0|1:27:17,8,2:17:653:8,2:311,79:-20.4343,0,-51.1836,-19.05,-47.0901,-72.0463 0|0:49:40,4,5:40:1565:4,5:149,203:-4.71949,-4.58017,-132.037,0,-116.497,-127.185 dDocent_Contig_11744 17 . T G 5080.33 . AB=0.366795;ABP=82.8434;AC=6;AF=0.5;AN=12;AO=190;CIGAR=1X;DP=518;DPB=518;DPRA=0;EPP=415.59;EPPR=713.082;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=59.9847;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0315789;PAIREDR=0.733945;PAO=0;PQA=0;PQR=0;PRO=0;QA=7485;QR=12078;RO=327;RPL=0;RPP=415.59;RPPR=713.082;RPR=190;RUN=1;SAF=190;SAP=415.59;SAR=0;SRF=327;SRP=713.082;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:121:72,49:72:2709:49:1931:-137.572,0,-207.58 0/1:95:83,12:83:3050:12:477:-14.6824,0,-246.081 0/1:52:40,12:40:1467:12:459:-25.9958,0,-116.649 0/1:108:84,24:84:3088:24:950:-53.2901,0,-245.581 0/1:82:27,55:27:998:55:2167:-170.526,0,-65.4428 0/1:60:21,38:21:766:38:1501:-117.188,0,-51.1031 dDocent_Contig_11745 22 . C T 157.806 . AB=0.0952381;ABP=32.8939;AC=0;AF=0;AN=12;AO=2;CIGAR=1X11M;DP=131;DPB=132.083;DPRA=0.807692;EPP=7.35324;EPPR=250.558;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=6.93889e-18;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=69;QR=4445;RO=114;RPL=0;RPP=7.35324;RPPR=250.558;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=114;SRP=250.558;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:13:11,2,0,0:11:431:2,0,0:73,0,0:-3.01791,0,-35.2304,-6.32924,-35.8325,-41.7928,-6.32924,-35.8325,-41.7928,-41.7928 0|0:21:11,2,5,2:11:419:2,5,2:77,196,69:-12.7493,-11.4697,-45.2324,0,-29.7977,-32.8908,-10.4593,-40.2329,-28.7933,-44.2301 0|0:19:16,0,3,0:16:628:0,3,0:0,118,0:-5.22835,-10.0448,-61.6945,0,-52.0408,-51.1377,-10.0448,-61.6945,-52.0408,-61.6945 0|0:27:27,0,0,0:27:1049:0,0,0:0,0,0:0,-8.12781,-94.7104,-8.12781,-94.7104,-94.7104,-8.12781,-94.7104,-94.7104,-94.7104 0|0:37:36,1,0,0:36:1420:1,0,0:37,0,0:0,-7.44028,-124.367,-10.8371,-124.668,-127.695,-10.8371,-124.668,-127.695,-127.695 0|0:14:13,0,0,0:13:498:0,0,0:0,0,0:0,-3.91339,-44.9227,-3.91339,-44.9227,-44.9227,-3.91339,-44.9227,-44.9227,-44.9227 dDocent_Contig_11746 25 . T G 3964.25 . AB=0.722222;ABP=80.2182;AC=6;AF=0.5;AN=12;AO=130;CIGAR=1X;DP=180;DPB=180;DPRA=0;EPP=285.302;EPPR=111.584;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.984615;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5111;QR=1984;RO=50;RPL=0;RPP=285.302;RPPR=111.584;RPR=130;RUN=1;SAF=130;SAP=285.302;SAR=0;SRF=50;SRP=111.584;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:29:13,16:13:505:16:636:-48.8424,0,-37.0628 0/1:49:7,42:7:280:42:1668:-135.603,0,-10.8215 0/1:20:15,5:15:596:5:187:-11.1667,0,-47.9564 0/1:14:5,9:5:198:9:348:-27.46,0,-13.9825 0/1:48:6,42:6:243:42:1660:-135.185,0,-7.79853 0/1:20:4,16:4:162:16:612:-49.3901,0,-8.94636 dDocent_Contig_11747 34 . A C 476.619 . AB=0.181818;ABP=128.758;AC=2;AF=0.166667;AN=12;AO=28;CIGAR=1X;DP=468;DPB=468;DPRA=0.910204;EPP=63.8115;EPPR=958.458;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.964286;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1118;QR=17007;RO=440;RPL=0;RPP=63.8115;RPPR=958.458;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=440;SRP=958.458;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:73:62,11:62:2402:11:433:-17.349,0,-194.382 0/0:98:98,0:98:3655:0:0:0,-29.5009,-328.999 0/0:80:78,2:78:3067:2:82:0,-16.3027,-268.339 0/1:70:55,15:55:2137:15:603:-33.5348,0,-171.449 0/0:65:65,0:65:2520:0:0:0,-19.5669,-226.959 0/0:82:82,0:82:3226:0:0:0,-24.6845,-290.422 dDocent_Contig_11748 12 . T G 157.934 . AB=0.191489;ABP=41.8658;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=169;DPB=169;DPRA=0.640777;EPP=24.725;EPPR=348.274;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.899371;PAO=0;PQA=0;PQR=0;PRO=0;QA=401;QR=6360;RO=159;RPL=0;RPP=24.725;RPPR=348.274;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=159;SRP=348.274;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:29:25,4:25:975:4:161:-6.1454,0,-79.3131 0/0:38:38,0:38:1526:0:0:0,-11.4391,-137.578 0/0:32:32,0:32:1290:0:0:0,-9.63296,-116.366 0/1:18:13,5:13:515:5:199:-12.8698,0,-41.2749 0/0:33:33,0:33:1335:0:0:0,-9.93399,-120.409 0/0:19:18,1:18:719:1:41:0,-1.625,-60.9404 dDocent_Contig_11749 22 . C T 1403.33 . AB=0.0173913;ABP=235.66;AC=0;AF=0;AN=12;AO=6;CIGAR=1X2M1X2M2X2M;DP=215;DPB=215;DPRA=0;EPP=16.0391;EPPR=322.217;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=1;PAIREDR=0.986395;PAO=0;PQA=0;PQR=0;PRO=0;QA=238;QR=5721;RO=147;RPL=0;RPP=16.0391;RPPR=322.217;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=147;SRP=322.217;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:14:12,0,0,0,2,0:12:448:0,0,0,2,0:0,0,0,80,0:-3.37737,-6.98973,-43.6392,-6.98973,-43.6392,-43.6392,-6.98973,-43.6392,-43.6392,-43.6392,0,-37.0452,-37.0452,-37.0452,-36.4432,-6.98973,-43.6392,-43.6392,-43.6392,-37.0452,-43.6392 0|0:10:0,0,2,0,6,2:0:0:0,2,0,6,2:0,75,0,243,81:-26.7405,-26.7405,-26.7405,-20.6044,-20.6044,-20.0024,-26.7405,-26.7405,-20.6044,-26.7405,-6.69408,-6.69408,-0.56693,-6.69408,-4.8879,-20.0599,-20.0599,-13.9253,-20.0599,0,-19.4578 0|0:10:1,0,0,3,6,0:1:40:0,0,3,6,0:0,0,120,238,0:-25.8779,-26.179,-29.4743,-26.179,-29.4743,-29.4743,-16.2928,-19.5884,-19.5884,-18.6853,-6.58995,-9.88503,-9.88503,0,-8.07885,-26.179,-29.4743,-29.4743,-19.5884,-9.88503,-29.4743 0|0:14:9,0,2,0,2,0:9:356:0,2,0,2,0:0,78,0,81,0:-3.97452,-6.68379,-35.9801,-0.277993,-29.5701,-28.968,-6.68379,-35.9801,-29.5701,-35.9801,0,-29.2995,-22.8894,-29.2995,-28.6975,-6.68379,-35.9801,-29.5701,-35.9801,-29.2995,-35.9801 0|0:115:77,2,35,0,0,0:77:2994:2,35,0,0,0:78,1370,0,0,0:-89.5272,-106.295,-351.716,0,-239.676,-235.551,-112.707,-352.318,-246.087,-358.73,-112.707,-352.318,-246.087,-358.73,-358.73,-112.707,-352.318,-246.087,-358.73,-358.73,-358.73 0|0:52:48,4,0,0,0,0:48:1883:4,0,0,0,0:160,0,0,0,0:0,-0.869547,-154.913,-14.4494,-156.117,-169.298,-14.4494,-156.117,-169.298,-169.298,-14.4494,-156.117,-169.298,-169.298,-169.298,-14.4494,-156.117,-169.298,-169.298,-169.298,-169.298 dDocent_Contig_11751 161 . C T 62.5052 . AB=0.115385;ABP=36.4176;AC=3;AF=0.3;AN=10;AO=5;CIGAR=1X;DP=95;DPB=95;DPRA=0.528302;EPP=6.91895;EPPR=198.443;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=197;QR=3495;RO=90;RPL=4;RPP=6.91895;RPPR=198.443;RPR=1;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=198.443;SRR=90;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:23,3:23:899:3:121:-3.45342,0,-73.3859 0/0:28:28,0:28:1122:0:0:0,-8.42884,-101.266 0/0:15:14,1:14:532:1:35:0,-1.01682,-44.7096 0/0:25:25,0:25:942:0:0:0,-7.52575,-85.066 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_11752 35 . A G 81.5772 . AB=0.227273;ABP=17.2236;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=134;DPB=134;DPRA=0.835616;EPP=18.2106;EPPR=278.787;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.142857;PAIREDR=0.645669;PAO=0;PQA=0;PQR=0;PRO=0;QA=244;QR=4476;RO=127;RPL=0;RPP=18.2106;RPPR=278.787;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=278.787;SRR=127;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:17,5:17:590:5:174:-9.37929,0,-46.8025 0/0:26:25,1:25:881:1:35:0,-4.32815,-76.1092 0/0:13:12,1:12:428:1:35:0,-0.414761,-35.3605 0/0:16:16,0:16:565:0:0:0,-4.81648,-51.1806 0/0:24:24,0:24:843:0:0:0,-7.22472,-76.1889 0/0:33:33,0:33:1169:0:0:0,-9.93399,-105.517 dDocent_Contig_11753 54 . A T 45.8244 . AB=0.5;ABP=3.0103;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=121;DPB=121;DPRA=0.5125;EPP=11.6962;EPPR=257.073;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=8.67362e-19;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=101;QR=4413;RO=117;RPL=4;RPP=11.6962;RPPR=257.073;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=117;SRP=257.073;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:988:0:0:0,-7.82678,-89.2222 0/0:29:29,0:29:1060:0:0:0,-8.72987,-95.6827 0/0:25:25,0:25:938:0:0:0,-7.52575,-84.7245 0/0:30:29,1:29:1123:1:7:0,-8.3309,-100.663 0/0:7:6,1:6:226:1:17:0,-0.407231,-18.9975 0/1:4:2,2:2:78:2:77:-6.10502,0,-6.19918 dDocent_Contig_11754 16 . G A 114.01 . AB=0.125;ABP=120.27;AC=2;AF=0.166667;AN=12;AO=21;CIGAR=1X;DP=387;DPB=387;DPRA=0.651786;EPP=48.6112;EPPR=797.769;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.991803;PAO=0;PQA=0;PQR=0;PRO=0;QA=824;QR=14348;RO=366;RPL=0;RPP=48.6112;RPPR=797.769;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=366;SRP=797.769;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:49:45,4:45:1781:4:159:0,-0.0590249,-145.817 0/0:74:69,5:69:2685:5:190:0,-4.81539,-224.319 0/1:41:37,4:37:1471:4:160:-2.4412,0,-120.302 0/1:55:47,8:47:1840:8:315:-12.1556,0,-149.264 0/0:79:79,0:79:3092:0:0:0,-23.7814,-278.38 0/0:89:89,0:89:3479:0:0:0,-26.7917,-313.169 dDocent_Contig_11755 128 . A T 81.6458 . AB=0.152778;ABP=78.4086;AC=1;AF=0.125;AN=8;AO=25;CIGAR=1X;DP=416;DPB=416;DPRA=0;EPP=57.2971;EPPR=852.056;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.987212;PAO=0;PQA=0;PQR=0;PRO=0;QA=813;QR=13310;RO=391;RPL=0;RPP=57.2971;RPPR=852.056;RPR=25;RUN=1;SAF=0;SAP=57.2971;SAR=25;SRF=0;SRP=852.056;SRR=391;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:127:125,2:125:4212:2:67:0,-31.8678,-372.903 0/0:116:113,3:113:3852:3:101:0,-25.4959,-337.461 0/1:72:61,11:61:2100:11:347:-9.86355,0,-167.592 0/0:101:92,9:92:3146:9:298:0,-3.26085,-256.222 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11756 21 . A T 15420.2 . AB=0.0909091;ABP=114.94;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=2X;DP=617;DPB=617;DPRA=0.726415;EPP=18.2106;EPPR=270.101;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=271;QR=4818;RO=123;RPL=0;RPP=18.2106;RPPR=270.101;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=123;SRP=270.101;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:77:6,7,64:6:239:7,64:271,2510:-207.161,-186.708,-204.282,-2.56864,0,-2.98856 0|0:97:41,0,56:41:1608:0,56:0,2200:-168.983,-181.326,-313.559,0,-132.625,-115.768 0|0:71:33,0,38:33:1284:0,38:0,1494:-113.343,-123.277,-228.786,0,-105.899,-94.4603 0|0:127:21,0,106:21:825:0,106:0,4193:-339.11,-345.431,-413.285,0,-68.2468,-36.3376 0|0:106:6,0,100:6:241:0,100:0,3870:-326.268,-328.074,-347.934,-9.84251,-30.103,0 0|0:139:16,0,123:16:621:0,123:0,4870:-396.371,-401.187,-452.208,0,-51.4092,-14.3825 dDocent_Contig_11757 7 . C A 14038.4 . AB=0.597122;ABP=25.7873;AC=8;AF=0.666667;AN=12;AO=434;CIGAR=1X;DP=546;DPB=546;DPRA=0;EPP=945.429;EPPR=246.215;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=16596;QR=4278;RO=112;RPL=0;RPP=945.429;RPPR=246.215;RPR=434;RUN=1;SAF=434;SAP=945.429;SAR=0;SRF=112;SRP=246.215;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:16,21:16:589:21:810:-62.0871,0,-42.1963 0/1:95:46,49:46:1755:49:1882:-141.031,0,-129.606 0/1:27:16,11:16:619:11:419:-29.9342,0,-47.9223 0/1:119:34,85:34:1315:85:3234:-255.391,0,-82.8152 1/1:101:0,101:0:0:101:3884:-349.658,-30.404,0 1/1:167:0,167:0:0:167:6367:-572.959,-50.272,0 dDocent_Contig_11758 1 . N G 67.4051 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=71;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:71:-6.73943,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11760 7 . C T 90.9974 . AB=0.148936;ABP=53.3238;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=1X;DP=218;DPB=218;DPRA=0.549708;EPP=18.2106;EPPR=448.204;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.971292;PAO=0;PQA=0;PQR=0;PRO=0;QA=270;QR=8015;RO=209;RPL=0;RPP=18.2106;RPPR=456.848;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=208;SRP=448.204;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:53:53,0:53:2028:0:0:0,-15.9546,-182.758 0/0:54:52,0:52:2001:0:0:0,-15.6536,-180.035 0/1:12:8,4:8:310:4:154:-10.6212,0,-24.6512 0/1:35:32,3:32:1230:3:116:-0.281655,0,-100.458 0/0:35:35,0:35:1336:0:0:0,-10.536,-120.525 0/0:29:29,0:29:1110:0:0:0,-8.72987,-100.202 dDocent_Contig_11761 25 . T C 1122.36 . AB=0.257732;ABP=101.913;AC=4;AF=0.333333;AN=12;AO=52;CIGAR=1X;DP=274;DPB=274;DPRA=6.65;EPP=115.927;EPPR=485.077;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2025;QR=8953;RO=222;RPL=0;RPP=115.927;RPPR=485.077;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=222;SRP=485.077;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:20,2:20:809:2:78:-0.780813,0,-66.4989 0/0:72:70,2:70:2828:2:78:0,-14.2707,-247.212 0/1:39:30,9:30:1199:9:351:-20.2117,0,-96.444 0/1:74:55,19:55:2230:19:738:-44.4749,0,-178.581 0/1:59:39,20:39:1561:20:780:-52.767,0,-122.964 0/0:8:8,0:8:326:0:0:0,-2.40824,-29.7099 dDocent_Contig_11762 62 . C G 1512.98 . AB=0.272727;ABP=131.325;AC=5;AF=0.416667;AN=12;AO=83;CIGAR=1X;DP=359;DPB=359;DPRA=0;EPP=183.243;EPPR=602.337;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.73494;PAIREDR=0.742754;PAO=0;PQA=0;PQR=0;PRO=0;QA=2899;QR=9699;RO=276;RPL=83;RPP=183.243;RPPR=602.337;RPR=0;RUN=1;SAF=83;SAP=183.243;SAR=0;SRF=276;SRP=602.337;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:53:43,10:43:1479:10:347:-15.61,0,-117.443 0/1:66:41,25:41:1399:25:839:-55.9456,0,-106.334 0/1:50:24,26:24:861:26:918:-67.8757,0,-62.7582 0/1:74:62,12:62:2194:12:441:-17.7534,0,-175.441 0/1:43:38,5:38:1370:5:177:-3.33161,0,-110.652 0/0:73:68,5:68:2396:5:177:0,-5.69894,-199.608 dDocent_Contig_11763 13 . C T 7716.14 . AB=0.607843;ABP=13.3141;AC=6;AF=0.5;AN=12;AO=223;CIGAR=1X;DP=316;DPB=316;DPRA=2.48113;EPP=487.249;EPPR=204.957;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8943;QR=3701;RO=93;RPL=0;RPP=487.249;RPPR=204.957;RPR=223;RUN=1;SAF=223;SAP=487.249;SAR=0;SRF=93;SRP=204.957;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:50:29,21:29:1128:21:848:-61.5799,0,-86.7481 0/1:52:11,41:11:448:41:1655:-133.518,0,-25.0222 0/0:9:9,0:9:357:0:0:0,-2.70927,-32.4909 0/0:44:44,0:44:1768:0:0:0,-13.2453,-159.334 1/1:45:0,45:0:0:45:1813:-163.38,-13.5464,0 1/1:116:0,116:0:0:116:4627:-416.358,-34.9195,0 dDocent_Contig_11764 119 . C T 1282.17 . AB=0.442478;ABP=6.2579;AC=5;AF=0.5;AN=10;AO=54;CIGAR=1X;DP=134;DPB=134;DPRA=1.72059;EPP=120.27;EPPR=176.728;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1847;QR=2629;RO=80;RPL=0;RPP=120.27;RPPR=176.728;RPR=54;RUN=1;SAF=0;SAP=120.27;SAR=54;SRF=0;SRP=176.728;SRR=80;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:559:0:0:0,-5.11751,-50.6246 0/1:27:14,13:14:442:13:425:-30.4345,0,-31.9557 0/1:41:16,25:16:520:25:866:-65.9146,0,-34.7677 0/1:45:33,12:33:1108:12:417:-24.3166,0,-86.4776 ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:139:-12.8524,-1.20412,0 dDocent_Contig_11765 11 . T A 96.8691 . AB=0.75;ABP=5.18177;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=72;DPB=72;DPRA=0.294118;EPP=9.52472;EPPR=120.112;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=58.3043;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.855072;PAO=0;PQA=0;PQR=0;PRO=0;QA=118;QR=2603;RO=69;RPL=0;RPP=9.52472;RPPR=152.842;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=65;SRP=120.112;SRR=4;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:632:0:0:0,-5.11751,-57.2102 0/0:15:15,0:15:577:0:0:0,-4.51545,-52.2707 0/0:10:10,0:10:388:0:0:0,-3.0103,-35.2765 0/0:18:18,0:18:676:0:0:0,-5.41854,-60.4011 0/1:4:1,3:1:38:3:118:-9.7986,0,-0.591627 0/0:8:8,0:8:292:0:0:0,-2.40824,-26.6259 dDocent_Contig_11766 1 . N G 75.9266 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=80;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:80:-7.59157,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11767 67 . G C 182.977 . AB=0.411765;ABP=4.1599;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=61;DPB=61;DPRA=1.93182;EPP=18.2106;EPPR=120.27;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=273;QR=1920;RO=54;RPL=7;RPP=18.2106;RPPR=120.27;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=54;SRP=120.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:6:6,0:6:220:0:0:0,-1.80618,-20.1555 0/0:19:19,0:19:686:0:0:0,-5.71957,-62.0681 0/0:6:6,0:6:204:0:0:0,-1.80618,-18.6925 0/0:7:7,0:7:255:0:0:0,-2.10721,-23.3019 0/0:6:6,0:6:219:0:0:0,-1.80618,-20.0642 0/1:17:10,7:10:336:7:273:-19.8205,0,-25.4431 dDocent_Contig_11768 200 . G A 356.889 . AB=0.246575;ABP=43.7328;AC=1;AF=0.125;AN=8;AO=18;CIGAR=1X;DP=320;DPB=320;DPRA=0.88664;EPP=42.0968;EPPR=656.623;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=656;QR=11258;RO=301;RPL=18;RPP=42.0968;RPPR=656.623;RPR=0;RUN=1;SAF=0;SAP=42.0968;SAR=18;SRF=0;SRP=656.623;SRR=301;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 0/0:128:128,0:128:4830:0:0:0,-38.5318,-434.737 0/0:26:26,0:26:993:0:0:0,-7.82678,-89.6796 0/1:73:55,18:55:2042:18:656:-37.3879,0,-162.032 ./.:.:.:.:.:.:.:. 0/0:93:92,0:92:3393:0:0:0,-27.6948,-305.411 dDocent_Contig_11769 14 . C T 820.974 . AB=0.0493827;ABP=145.872;AC=0;AF=0;AN=12;AO=4;CIGAR=2X;DP=214;DPB=214;DPRA=0;EPP=11.6962;EPPR=352.67;GTI=0;LEN=1;MEANALT=2;MQM=53.25;MQMR=58.8606;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.448485;PAO=0;PQA=0;PQR=0;PRO=0;QA=156;QR=6478;RO=165;RPL=0;RPP=11.6962;RPPR=361.303;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=164;SRP=352.67;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:37:31,1,5:31:1222:1,5:38,198:-6.83881,-13.0564,-113.28,0,-97.4215,-99.0325 0|0:44:30,3,11:30:1166:3,11:118,436:-26.8606,-26.2534,-120.429,0,-85.4422,-91.7705 0|0:41:37,0,4:37:1447:0,4:0,162:-2.62452,-13.7626,-132.563,0,-119.204,-118 0|0:45:34,0,11:34:1344:0,11:0,430:-25.5039,-35.7389,-146.332,0,-110.985,-107.673 0|0:32:27,0,5:27:1059:0,5:0,187:-7.55473,-15.6825,-97.9156,0,-82.6064,-81.1013 0|0:15:6,0,8:6:240:0,8:0,313:-23.9199,-25.7261,-45.4986,0,-19.7694,-17.3612 dDocent_Contig_11770 36 . A T 127.005 . AB=0.184211;ABP=35.9253;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=426;DPB=426;DPRA=0.874194;EPP=33.4109;EPPR=897.657;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.714286;PAIREDR=0.68932;PAO=0;PQA=0;PQR=0;PRO=0;QA=560;QR=16165;RO=412;RPL=0;RPP=33.4109;RPPR=897.657;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=412;SRP=897.657;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:62:58,4:58:2274:4:162:0,-3.6969,-189.863 0/0:79:77,2:77:3003:2:76:0,-16.5671,-263.166 0/1:38:31,7:31:1219:7:281:-14.2234,0,-98.544 0/0:92:91,1:91:3587:1:41:0,-23.6002,-318.773 0/0:45:45,0:45:1784:0:0:0,-13.5463,-160.779 0/0:110:110,0:110:4298:0:0:0,-33.1133,-386.804 dDocent_Contig_11771 108 . T A 1492.69 . AB=0.779221;ABP=55.1538;AC=1;AF=0.125;AN=8;AO=63;CIGAR=1X;DP=142;DPB=142;DPRA=6.1;EPP=139.813;EPPR=174.557;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2008;QR=2257;RO=79;RPL=0;RPP=139.813;RPPR=174.557;RPR=63;RUN=1;SAF=0;SAP=139.813;SAR=63;SRF=0;SRP=174.557;SRR=79;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 0/0:12:12,0:12:323:0:0:0,-3.61236,-29.334 0/0:8:8,0:8:197:0:0:0,-2.40824,-17.9743 0/1:77:17,60:17:531:60:1932:-150.967,0,-24.9119 0/0:45:42,3:42:1206:3:76:0,-6.45511,-101.713 dDocent_Contig_11772 45 . T A 265.722 . AB=0;ABP=0;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=6M1X3M3X3M2X3M1X2M1X;DP=126;DPB=126;DPRA=0;EPP=7.35324;EPPR=128.956;GTI=0;LEN=1;MEANALT=7;MQM=60;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=68;QR=1915;RO=58;RPL=0;RPP=7.35324;RPPR=128.956;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=58;SRP=128.956;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:5:2,0,0,3,0,0,0,0,0,0:2:69:0,0,3,0,0,0,0,0,0:0,0,86,0,0,0,0,0,0:-6.52043,-7.12249,-12.7515,-7.12249,-12.7515,-12.7515,0,-5.9506,-5.9506,-5.04751,-7.12249,-12.7515,-12.7515,-5.9506,-12.7515,-7.12249,-12.7515,-12.7515,-5.9506,-12.7515,-12.7515,-7.12249,-12.7515,-12.7515,-5.9506,-12.7515,-12.7515,-12.7515,-7.12249,-12.7515,-12.7515,-5.9506,-12.7515,-12.7515,-12.7515,-12.7515,-7.12249,-12.7515,-12.7515,-5.9506,-12.7515,-12.7515,-12.7515,-12.7515,-12.7515,-7.12249,-12.7515,-12.7515,-5.9506,-12.7515,-12.7515,-12.7515,-12.7515,-12.7515,-12.7515 0|0:39:28,2,0,3,0,0,0,0,2,0:28:925:2,0,3,0,0,0,0,2,0:68,0,78,0,0,0,0,68,0:0,-2.90458,-77.1264,-8.42884,-77.7284,-83.2453,-2.32845,-71.6175,-77.1342,-76.2311,-8.42884,-77.7284,-83.2453,-77.1342,-83.2453,-8.42884,-77.7284,-83.2453,-77.1342,-83.2453,-83.2453,-8.42884,-77.7284,-83.2453,-77.1342,-83.2453,-83.2453,-83.2453,-8.42884,-77.7284,-83.2453,-77.1342,-83.2453,-83.2453,-83.2453,-83.2453,-2.90458,-72.2114,-77.7284,-71.6175,-77.7284,-77.7284,-77.7284,-77.7284,-77.1264,-8.42884,-77.7284,-83.2453,-77.1342,-83.2453,-83.2453,-83.2453,-83.2453,-77.7284,-83.2453 0|0:24:8,0,0,7,0,0,0,0,0,0:8:265:0,0,7,0,0,0,0,0,0:0,0,174,0,0,0,0,0,0:-11.1548,-13.563,-35.0298,-13.563,-35.0298,-35.0298,0,-21.4863,-21.4863,-19.3791,-13.563,-35.0298,-35.0298,-21.4863,-35.0298,-13.563,-35.0298,-35.0298,-21.4863,-35.0298,-35.0298,-13.563,-35.0298,-35.0298,-21.4863,-35.0298,-35.0298,-35.0298,-13.563,-35.0298,-35.0298,-21.4863,-35.0298,-35.0298,-35.0298,-35.0298,-13.563,-35.0298,-35.0298,-21.4863,-35.0298,-35.0298,-35.0298,-35.0298,-35.0298,-13.563,-35.0298,-35.0298,-21.4863,-35.0298,-35.0298,-35.0298,-35.0298,-35.0298,-35.0298 0|0:15:8,0,0,2,0,0,0,0,0,1:8:261:0,0,2,0,0,0,0,0,1:0,0,61,0,0,0,0,0,27:-2.49441,-4.90265,-26.0097,-4.90265,-26.0097,-26.0097,0,-21.1215,-21.1215,-20.5195,-4.90265,-26.0097,-26.0097,-21.1215,-26.0097,-4.90265,-26.0097,-26.0097,-21.1215,-26.0097,-26.0097,-4.90265,-26.0097,-26.0097,-21.1215,-26.0097,-26.0097,-26.0097,-4.90265,-26.0097,-26.0097,-21.1215,-26.0097,-26.0097,-26.0097,-26.0097,-4.90265,-26.0097,-26.0097,-21.1215,-26.0097,-26.0097,-26.0097,-26.0097,-26.0097,-2.77321,-23.8829,-23.8829,-18.995,-23.8829,-23.8829,-23.8829,-23.8829,-23.8829,-23.5819 0|1:25:8,0,0,5,2,4,2,3,0,0:8:263:0,0,5,2,4,2,3,0,0:0,0,129,66,137,65,87,0,0:-8.63971,-11.0479,-32.3162,-11.0479,-32.3162,-32.3162,-0.956695,-22.2235,-22.2235,-20.7183,-5.72378,-26.9952,-26.9952,-16.9029,-26.3931,0,-21.277,-21.277,-11.1846,-15.9546,-20.0729,-5.7964,-27.0676,-27.0676,-16.9754,-21.7461,-16.0272,-26.4655,-4.93885,-26.2068,-26.2068,-16.1176,-20.886,-15.1676,-20.9584,-25.3037,-11.0479,-32.3162,-32.3162,-22.2235,-26.9952,-21.277,-27.0676,-26.2068,-32.3162,-11.0479,-32.3162,-32.3162,-22.2235,-26.9952,-21.277,-27.0676,-26.2068,-32.3162,-32.3162 0|0:18:4,0,4,4,0,0,3,0,0,2:4:132:0,4,4,0,0,3,0,0,2:0,90,102,0,0,100,0,0,64:-6.90479,-8.10891,-18.7926,-1.23565,-11.9162,-10.7121,-0.144331,-10.8283,-3.96361,-9.62418,-8.10891,-18.7926,-11.9162,-10.8283,-18.7926,-8.10891,-18.7926,-11.9162,-10.8283,-18.7926,-18.7926,0,-10.6897,-3.81546,-2.72523,-10.6897,-10.6897,-9.78666,-8.10891,-18.7926,-11.9162,-10.8283,-18.7926,-18.7926,-10.6897,-18.7926,-8.10891,-18.7926,-11.9162,-10.8283,-18.7926,-18.7926,-10.6897,-18.7926,-18.7926,-2.94557,-13.6323,-6.75786,-5.66854,-13.6323,-13.6323,-5.52734,-13.6323,-13.6323,-13.0302 dDocent_Contig_11773 108 . A G 300.426 . AB=0.201923;ABP=83.2713;AC=5;AF=0.416667;AN=12;AO=24;CIGAR=1X;DP=144;DPB=144;DPRA=0;EPP=55.1256;EPPR=261.416;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0833333;PAIREDR=0.932773;PAO=0;PQA=0;PQR=0;PRO=0;QA=830;QR=4030;RO=119;RPL=0;RPP=55.1256;RPPR=261.416;RPR=24;RUN=1;SAF=0;SAP=55.1256;SAR=24;SRF=0;SRP=261.416;SRR=119;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:21,3:21:692:3:99:-2.0124,0,-55.3646 0/1:10:9,1:9:312:1:35:-0.488329,0,-25.4059 0/1:28:15,12:15:506:12:418:-29.707,0,-37.6194 0/1:21:19,2:19:639:2:70:-0.325766,0,-51.5058 0/0:40:37,3:37:1280:3:103:0,-2.43118,-105.894 0/1:21:18,3:18:601:3:105:-3.47453,0,-48.0844 dDocent_Contig_11774 48 . G A 1418.25 . AB=0.275556;ABP=101.46;AC=5;AF=0.416667;AN=12;AO=63;CIGAR=1X;DP=261;DPB=261;DPRA=0;EPP=139.813;EPPR=432.962;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.333333;PAIREDR=0.409091;PAO=0;PQA=0;PQR=0;PRO=0;QA=2427;QR=7786;RO=198;RPL=0;RPP=139.813;RPPR=432.962;RPR=63;RUN=1;SAF=63;SAP=139.813;SAR=0;SRF=198;SRP=432.962;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:49:45,4:45:1749:4:160:-0.0329567,0,-142.878 0/1:55:41,14:41:1614:14:528:-31.2974,0,-128.944 0/0:36:35,1:35:1380:1:37:0,-7.13925,-120.764 0/1:43:35,8:35:1390:8:324:-16.5851,0,-112.412 0/1:30:17,13:17:661:13:465:-33.136,0,-50.7902 0/1:48:25,23:25:992:23:913:-68.0279,0,-75.1294 dDocent_Contig_11775 14 . G A 720.872 . AB=0.0526316;ABP=135.127;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=2X1M1X3M;DP=184;DPB=184;DPRA=0;EPP=11.6962;EPPR=248.387;GTI=0;LEN=1;MEANALT=5.5;MQM=51;MQMR=60;NS=6;NUMALT=6;ODDS=0;PAIRED=0;PAIREDR=0.654867;PAO=0;PQA=0;PQR=0;PRO=0;QA=162;QR=4417;RO=113;RPL=0;RPP=11.6962;RPPR=248.387;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=113;SRP=248.387;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:20:12,0,7,0,0,0,1:12:473:0,7,0,0,0,1:0,267,0,0,0,41:-18.2607,-21.8731,-60.7931,0,-38.9,-36.7928,-21.8731,-60.7931,-38.9,-60.7931,-21.8731,-60.7931,-38.9,-60.7931,-60.7931,-21.8731,-60.7931,-38.9,-60.7931,-60.7931,-60.7931,-18.4854,-57.408,-35.5147,-57.408,-57.408,-57.408,-57.1069 0|0:39:24,6,1,2,3,2,1:24:949:6,1,2,3,2,1:237,41,81,119,79,36:-12.2774,0,-76.2921,-16.1169,-74.7137,-93.9147,-12.8802,-71.477,-87.5946,-90.377,-9.7056,-68.3021,-84.4195,-81.1828,-86.901,-13.0015,-71.5977,-87.7151,-84.4784,-81.3035,-90.4976,-16.5671,-75.1619,-91.2793,-88.0426,-84.8676,-88.1632,-94.3627 0|0:46:31,0,2,0,4,0,9:31:1207:0,2,0,4,0,9:0,81,0,154,0,356:-19.9661,-29.298,-128.486,-22.6172,-121.806,-121.204,-29.298,-128.486,-121.806,-128.486,-16.6583,-115.843,-109.164,-115.843,-114.639,-29.298,-128.486,-121.806,-128.486,-115.843,-128.486,0,-99.189,-92.509,-99.189,-86.5465,-99.189,-96.4797 0|0:16:12,2,0,0,0,0,2:12:463:2,0,0,0,0,2:80,0,0,0,0,79:-2.98029,0,-37.4074,-6.59265,-38.0095,-44.6013,-6.59265,-38.0095,-44.6013,-44.6013,-6.59265,-38.0095,-44.6013,-44.6013,-44.6013,-6.59265,-38.0095,-44.6013,-44.6013,-44.6013,-44.6013,-0.0945461,-31.5076,-38.0998,-38.0998,-38.0998,-38.0998,-37.4977 0|0:37:24,0,2,2,0,3,5:24:945:0,2,2,0,3,5:0,74,81,0,118,198:-9.0732,-16.2979,-94.0378,-10.2482,-87.9852,-87.3832,-9.67559,-87.4165,-81.364,-86.8145,-16.2979,-94.0378,-87.9852,-87.4165,-94.0378,-6.59174,-84.3317,-78.2792,-77.7104,-84.3317,-83.4286,0,-77.7412,-71.6888,-71.1198,-77.7412,-68.035,-76.236 0|0:26:10,2,1,0,0,4,7:10:380:2,1,0,0,4,7:66,41,0,0,164,287:-20.6901,-18.3734,-48.9215,-20.3153,-46.1388,-51.169,-23.7004,-49.5236,-51.47,-54.8549,-23.7004,-49.5236,-51.47,-54.8549,-54.8549,-10.159,-35.9841,-37.9295,-41.3148,-41.3148,-40.1107,0,-25.8284,-27.773,-31.1587,-31.1587,-17.6147,-29.0514 dDocent_Contig_11776 9 . G A 98.3662 . AB=0.2;ABP=30.3709;AC=3;AF=0.25;AN=12;AO=7;CIGAR=1X;DP=89;DPB=89;DPRA=0.648148;EPP=18.2106;EPPR=181.071;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=265;QR=3104;RO=82;RPL=0;RPP=18.2106;RPPR=181.071;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=82;SRP=181.071;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:675:0:0:0,-5.41854,-61.0795 0/1:12:8,4:8:301:4:154:-10.6212,0,-23.8338 0/0:30:30,0:30:1144:0:0:0,-9.0309,-103.258 0/1:18:16,2:16:604:2:72:-1.41737,0,-49.2769 0/0:6:6,0:6:225:0:0:0,-1.80618,-20.611 0/1:5:4,1:4:155:1:39:-2.39141,0,-12.8203 dDocent_Contig_11777 9 . G A 498.908 . AB=0.5;ABP=3.0103;AC=3;AF=0.3;AN=10;AO=17;CIGAR=1X;DP=85;DPB=85;DPRA=0.818182;EPP=39.9253;EPPR=150.67;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=648;QR=2608;RO=68;RPL=0;RPP=39.9253;RPPR=150.67;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=68;SRP=150.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:763:0:0:0,-6.0206,-68.9963 0/0:25:25,0:25:962:0:0:0,-7.52575,-86.8933 0/0:10:10,0:10:383:0:0:0,-3.0103,-34.826 0/1:26:13,13:13:500:13:505:-37.9723,0,-37.5203 ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:143:-13.2195,-1.20412,0 dDocent_Contig_11778 10 . C A 39.1624 . AB=0.08;ABP=41.3151;AC=2;AF=0.166667;AN=12;AO=2;CIGAR=1X4M;DP=99;DPB=99;DPRA=2.27273;EPP=7.35324;EPPR=198.443;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=59.1778;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.577778;PAO=0;PQA=0;PQR=0;PRO=0;QA=79;QR=3448;RO=90;RPL=0;RPP=7.35324;RPPR=198.443;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=90;SRP=198.443;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:11:11,0,0:11:431:0,0:0,0:0,-3.31133,-39.1452,-3.31133,-39.1452,-39.1452 0|1:25:22,0,2:22:837:0,2:0,79:-0.00766345,-6.63032,-75.3134,0,-68.811,-68.209 0|1:30:24,5,0:24:903:5,0:174,0:-5.43831,0,-72.539,-12.663,-74.0441,-86.6853 0|0:18:18,0,0:18:690:0,0:0,0:0,-5.41854,-60.8814,-5.41854,-60.8814,-60.8814 0|0:8:8,0,0:8:317:0,0:0,0:0,-2.40824,-28.897,-2.40824,-28.897,-28.897 0|0:7:7,0,0:7:270:0,0:0,0:0,-2.10721,-24.6634,-2.10721,-24.6634,-24.6634 dDocent_Contig_11779 10 . C A 368.975 . AB=0.171642;ABP=128.502;AC=3;AF=0.25;AN=12;AO=27;CIGAR=1X;DP=260;DPB=260;DPRA=1.33099;EPP=61.6401;EPPR=508.963;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.222222;PAIREDR=0.532189;PAO=0;PQA=0;PQR=0;PRO=0;QA=1063;QR=9339;RO=233;RPL=0;RPP=61.6401;RPPR=508.963;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=233;SRP=508.963;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:45:37,8:37:1440:8:322:-15.802,0,-116.299 0/1:45:35,10:35:1419:10:377:-20.7276,0,-114.412 0/0:55:51,4:51:2064:4:159:0,-1.86469,-171.245 0/1:44:39,5:39:1576:5:205:-5.58969,0,-128.828 0/0:14:14,0:14:571:0:0:0,-4.21442,-51.7319 0/0:57:57,0:57:2269:0:0:0,-17.1587,-204.372 dDocent_Contig_11780 22 . T C 2094.39 . AB=0.286689;ABP=118.81;AC=5;AF=0.416667;AN=12;AO=87;CIGAR=1X;DP=370;DPB=370;DPRA=0;EPP=191.928;EPPR=617.537;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.333333;PAIREDR=0.431095;PAO=0;PQA=0;PQR=0;PRO=0;QA=3495;QR=11248;RO=283;RPL=0;RPP=191.928;RPPR=617.537;RPR=87;RUN=1;SAF=87;SAP=191.928;SAR=0;SRF=283;SRP=617.537;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:72:55,17:55:2170:17:678:-39.6773,0,-173.8 0/0:77:74,3:74:2955:3:122:0,-11.8068,-254.67 0/1:33:29,4:29:1148:4:162:-5.03276,0,-93.6578 0/1:36:33,3:33:1317:3:120:-0.35023,0,-107.954 0/1:64:43,21:43:1708:21:833:-56.0115,0,-134.676 0/1:88:49,39:49:1950:39:1580:-115.938,0,-149.207 dDocent_Contig_11781 15 . T G 532.357 . AB=0.3;ABP=27.3308;AC=5;AF=0.416667;AN=12;AO=22;CIGAR=1X;DP=85;DPB=85;DPRA=2.53571;EPP=50.7827;EPPR=139.813;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=867;QR=2521;RO=63;RPL=0;RPP=50.7827;RPPR=139.813;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=63;SRP=139.813;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:22,4:22:888:4:153:-6.31342,0,-72.4015 0/0:12:12,0:12:478:0:0:0,-3.61236,-43.3677 0/1:18:10,8:10:410:8:318:-23.5661,0,-31.842 0/1:26:17,9:17:663:9:355:-24.4829,0,-52.1647 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 0/0:2:2,0:2:82:0:0:0,-0.60206,-7.77968 dDocent_Contig_11782 98 . N A 66.4848 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=70;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_11783 107 . N C 61.7437 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=65;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:65:-6.17329,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11785 32 . C T 295.598 . AB=0.125;ABP=12.7819;AC=5;AF=0.416667;AN=12;AO=9;CIGAR=1X;DP=70;DPB=70;DPRA=0.296296;EPP=22.5536;EPPR=135.47;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.868852;PAO=0;PQA=0;PQR=0;PRO=0;QA=352;QR=2417;RO=61;RPL=0;RPP=22.5536;RPPR=135.47;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=61;SRP=135.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:684:0:0:0,-5.11751,-61.8912 0/0:24:24,0:24:931:0:0:0,-7.22472,-84.0921 0/0:13:13,0:13:522:0:0:0,-3.91339,-47.327 0/1:8:7,1:7:280:1:41:-1.68633,0,-23.1639 1/1:1:0,1:0:0:1:40:-3.99568,-0.30103,0 1/1:7:0,7:0:0:7:271:-24.7518,-2.10721,0 dDocent_Contig_11786 61 . G T 64.926 . AB=0.12037;ABP=138.205;AC=3;AF=0.25;AN=12;AO=15;CIGAR=1M1I1X;DP=228;DPB=235.5;DPRA=1.10563;EPP=3.15506;EPPR=118.098;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.533333;PAIREDR=0.59434;PAO=0;PQA=0;PQR=0;PRO=0;QA=546;QR=8301;RO=212;RPL=15;RPP=35.5824;RPPR=463.362;RPR=0;RUN=1;SAF=8;SAP=3.15506;SAR=7;SRF=159;SRP=118.098;SRR=53;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:38:33,4:33:1260:4:132:-0.680046,0,-102.141 0|1:39:34,5:34:1346:5:178:-4.62558,0,-109.668 0|0:49:47,2:47:1853:2:80:0,-7.15868,-159.401 0|1:31:27,4:27:1047:4:156:-5.08519,0,-85.193 0|0:35:35,0:35:1382:0:0:0,-10.536,-124.647 0|0:36:36,0:36:1413:0:0:0,-10.8371,-127.434 dDocent_Contig_11787 14 . T C 606.726 . AB=0.170854;ABP=190.27;AC=1;AF=0.0833333;AN=12;AO=59;CIGAR=1X;DP=1066;DPB=1066;DPRA=2.36867;EPP=131.127;EPPR=2189.68;GTI=0;LEN=1;MEANALT=1;MQM=59.4915;MQMR=59.4687;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.271102;PAO=0;PQA=0;PQR=0;PRO=0;QA=2335;QR=39709;RO=1007;RPL=0;RPP=131.127;RPPR=2189.68;RPR=59;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=1007;SRP=2189.68;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:199:165,34:165:6534:34:1354:-61.8944,0,-527.726 0/0:266:257,9:257:10148:9:349:0,-48.3081,-879.37 0/0:195:193,2:193:7619:2:80:0,-51.1093,-674.682 0/0:240:230,10:230:9092:10:394:0,-36.4312,-781.462 0/0:83:83,0:83:3241:0:0:0,-24.9855,-289.201 0/0:83:79,4:79:3075:4:158:0,-10.385,-261.535 dDocent_Contig_11788 85 . A G 36.1973 . AB=0.12766;ABP=59.6072;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=425;DPB=425;DPRA=0.772455;EPP=26.8965;EPPR=897.657;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.363636;PAIREDR=0.536408;PAO=0;PQA=0;PQR=0;PRO=0;QA=380;QR=14394;RO=412;RPL=11;RPP=26.8965;RPPR=897.657;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=412;SRP=897.657;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:52,2:52:1785:2:68:0,-9.79769,-154.473 0/0:123:120,2:120:4190:2:69:0,-30.3346,-370.823 0/1:47:40,6:40:1386:6:209:-5.1425,0,-111.049 0/0:34:33,1:33:1175:1:34:0,-6.83611,-102.66 0/0:81:81,0:81:2865:0:0:0,-24.3834,-258.09 0/0:86:86,0:86:2993:0:0:0,-25.8886,-269.606 dDocent_Contig_11789 16 . T A 289.605 . AB=0.186813;ABP=80.539;AC=2;AF=0.166667;AN=12;AO=33;CIGAR=1X;DP=401;DPB=401;DPRA=0;EPP=74.6689;EPPR=799.941;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=59.9401;NS=6;NUMALT=1;ODDS=0;PAIRED=0.878788;PAIREDR=0.880109;PAO=0;PQA=0;PQR=0;PRO=0;QA=1248;QR=14347;RO=367;RPL=0;RPP=74.6689;RPPR=799.941;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=367;SRP=799.941;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:44,10:44:1710:10:373:-17.6584,0,-137.886 0/0:101:95,6:95:3733:6:202:0,-11.9024,-317.291 0/0:58:56,1:56:2124:1:40:0,-13.5675,-187.359 0/0:80:76,4:76:2988:4:158:0,-9.4825,-254.439 0/1:37:30,7:30:1168:7:281:-14.5239,0,-94.2665 0/0:71:66,5:66:2624:5:194:0,-3.54371,-218.472 dDocent_Contig_11790 11 . G A 143.459 . AB=0.75;ABP=7.35324;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X3M1X;DP=209;DPB=209;DPRA=41.6;EPP=31.2394;EPPR=419.977;GTI=0;LEN=1;MEANALT=1;MQM=43;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.307692;PAIREDR=0.97449;PAO=0;PQA=0;PQR=0;PRO=0;QA=519;QR=7733;RO=196;RPL=0;RPP=31.2394;RPPR=428.619;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=195;SRP=419.977;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:83:82,1:82:3216:1:40:0,-21.531,-286.091 0|0:39:36,3:36:1419:3:118:0,-1.62015,-117.852 0|0:33:32,1:32:1270:1:39:0,-6.15331,-110.796 0|0:45:43,2:43:1712:2:80:0,-5.95456,-146.72 0|1:8:2,6:2:76:6:242:-15.8683,0,-4.80643 0|0:1:1,0:1:40:0:0:0,-0.30103,-3.99568 dDocent_Contig_11791 31 . G A 37.9471 . AB=0.137931;ABP=36.0317;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=161;DPB=161;DPRA=1.09848;EPP=3.0103;EPPR=13.0931;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.675159;PAO=0;PQA=0;PQR=0;PRO=0;QA=152;QR=5702;RO=157;RPL=0;RPP=11.6962;RPPR=343.931;RPR=4;RUN=1;SAF=2;SAP=3.0103;SAR=2;SRF=65;SRP=13.0931;SRR=92;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1114:0:0:0,-9.0309,-100.549 0/0:26:26,0:26:920:0:0:0,-7.82678,-83.0929 0/0:4:4,0:4:111:0:0:0,-1.20412,-10.264 0/1:29:25,4:25:922:4:152:-5.31748,0,-74.5579 0/0:33:33,0:33:1194:0:0:0,-9.93399,-107.753 0/0:39:39,0:39:1441:0:0:0,-11.7402,-129.962 dDocent_Contig_11792 7 . C A 86.6466 . AB=0.142857;ABP=57.2971;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=513;DPB=513;DPRA=1.05455;EPP=42.0968;EPPR=1077.89;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9939;NS=6;NUMALT=1;ODDS=0;PAIRED=0.444444;PAIREDR=0.389899;PAO=0;PQA=0;PQR=0;PRO=0;QA=698;QR=19041;RO=495;RPL=0;RPP=42.0968;RPPR=1077.89;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=495;SRP=1077.89;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:58:56,2:56:2121:2:78:0,-10.0563,-183.711 0/0:136:128,8:128:4896:8:312:0,-12.4952,-412.217 0/1:49:42,7:42:1620:7:273:-10.1875,0,-131.314 0/0:105:104,1:104:4027:1:35:0,-28.1095,-359.012 0/0:79:79,0:79:3056:0:0:0,-23.7814,-275.196 0/0:86:86,0:86:3321:0:0:0,-25.8886,-299.026 dDocent_Contig_11793 7 . C T 10948.6 . AB=0.57622;ABP=36.112;AC=6;AF=0.5;AN=12;AO=378;CIGAR=1X;DP=656;DPB=656;DPRA=0;EPP=823.827;EPPR=604.508;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.9735;MQMR=59.8159;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0;PAIREDR=0.357401;PAO=0;PQA=0;PQR=0;PRO=0;QA=14471;QR=10593;RO=277;RPL=0;RPP=823.827;RPPR=604.508;RPR=378;RUN=1;SAF=378;SAP=823.827;SAR=0;SRF=277;SRP=604.508;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:146:55,91:55:2085:91:3455:-267.134,0,-143.904 0/1:168:79,89:79:2996:89:3419:-257.266,0,-219.227 0/1:116:35,80:35:1350:80:3070:-241.469,0,-86.7275 0/1:129:31,98:31:1203:98:3757:-299.405,0,-69.7324 0/1:53:45,8:45:1734:8:305:-11.8554,0,-140.35 0/1:44:32,12:32:1225:12:465:-28.9567,0,-97.2862 dDocent_Contig_11795 13 . C T 964.706 . AB=0.254144;ABP=98.0392;AC=3;AF=0.25;AN=12;AO=52;CIGAR=1X1M1X;DP=305;DPB=305;DPRA=2.24;EPP=115.927;EPPR=550.221;GTI=0;LEN=1;MEANALT=1.2;MQM=59.7692;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.942308;PAIREDR=0.984127;PAO=0;PQA=0;PQR=0;PRO=0;QA=1951;QR=9991;RO=252;RPL=0;RPP=115.927;RPPR=550.221;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=252;SRP=550.221;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:51:40,10:40:1599:10:364:-17.6935,0,-128.738 0|1:59:44,15:44:1727:15:560:-32.9748,0,-137.901 0|1:71:50,21:50:1992:21:801:-51.024,0,-158.105 0|0:72:68,4:68:2702:4:150:0,-7.80847,-229.448 0|0:25:25,0:25:975:0:0:0,-7.52575,-88.056 0|0:27:25,2:25:996:2:76:0,-0.913553,-82.727 dDocent_Contig_11797 61 . G A 306.75 . AB=0.257576;ABP=36.701;AC=3;AF=0.25;AN=12;AO=17;CIGAR=1X;DP=95;DPB=95;DPRA=2.27586;EPP=39.9253;EPPR=172.385;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.647059;PAIREDR=0.692308;PAO=0;PQA=0;PQR=0;PRO=0;QA=608;QR=2785;RO=78;RPL=17;RPP=39.9253;RPPR=172.385;RPR=0;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=78;SRP=172.385;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:414:0:0:0,-3.61236,-37.591 0/0:9:9,0:9:311:0:0:0,-2.70927,-28.3252 0/1:13:10,3:10:353:3:107:-6.06842,0,-28.1932 0/0:8:8,0:8:293:0:0:0,-2.40824,-26.7215 0/1:35:27,8:27:972:8:283:-15.2744,0,-77.2585 0/1:18:12,6:12:442:6:218:-14.5541,0,-34.7069 dDocent_Contig_11798 7 . C A 310.654 . AB=0.165414;ABP=132.335;AC=3;AF=0.25;AN=12;AO=25;CIGAR=1X;DP=266;DPB=266;DPRA=1.12195;EPP=57.2971;EPPR=524.164;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.72;PAIREDR=0.833333;PAO=0;PQA=0;PQR=0;PRO=0;QA=954;QR=9267;RO=240;RPL=0;RPP=57.2971;RPPR=524.164;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=240;SRP=524.164;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:48:41,6:41:1588:6:233:-6.80225,0,-128.649 0/1:51:39,12:39:1498:12:454:-25.8524,0,-119.74 0/1:34:30,4:30:1160:4:150:-3.63091,0,-94.4638 0/0:51:48,3:48:1858:3:117:0,-4.44215,-156.556 0/0:45:45,0:45:1748:0:0:0,-13.5463,-157.573 0/0:37:37,0:37:1415:0:0:0,-11.1381,-127.63 dDocent_Contig_11800 139 . G A 1993.22 . AB=0.285714;ABP=16.9698;AC=6;AF=0.5;AN=12;AO=62;CIGAR=1X;DP=116;DPB=116;DPRA=1.16471;EPP=137.642;EPPR=120.27;GTI=0;LEN=1;MEANALT=1;MQM=59.8548;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2385;QR=2059;RO=54;RPL=0;RPP=137.642;RPPR=120.27;RPR=62;RUN=1;SAF=0;SAP=137.642;SAR=62;SRF=0;SRP=120.27;SRR=54;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:652:0:0:0,-5.11751,-59.0135 0/0:13:12,1:12:466:1:39:0,-0.0168255,-38.3944 0/1:20:12,8:12:439:8:311:-22.3337,0,-33.8191 0/1:15:13,2:13:502:2:62:-1.37146,0,-41.0129 1/1:24:0,24:0:0:24:933:-84.286,-7.22472,0 1/1:27:0,27:0:0:27:1040:-93.9072,-8.12781,0 dDocent_Contig_11801 68 . C T 233.884 . AB=0.230769;ABP=35.7494;AC=3;AF=0.25;AN=12;AO=12;CIGAR=1X;DP=88;DPB=88;DPRA=1.44444;EPP=29.068;EPPR=159.471;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.960526;PAO=0;PQA=0;PQR=0;PRO=0;QA=479;QR=2974;RO=76;RPL=12;RPP=29.068;RPPR=168.042;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=75;SRP=159.471;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:9,3:9:338:3:121:-7.66784,0,-27.16 0/1:28:22,6:22:846:6:236:-13.1823,0,-68.0327 0/0:11:11,0:11:430:0:0:0,-3.31133,-39.0507 0/1:12:9,3:9:360:3:122:-7.76013,0,-29.1511 0/0:9:9,0:9:359:0:0:0,-2.70927,-32.6733 0/0:16:16,0:16:641:0:0:0,-4.81648,-58.0238 dDocent_Contig_11802 11 . T G 54.7523 . AB=0.112903;ABP=83.705;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=361;DPB=361;DPRA=1.42282;EPP=31.2394;EPPR=758.683;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.873563;PAO=0;PQA=0;PQR=0;PRO=0;QA=516;QR=13997;RO=348;RPL=0;RPP=31.2394;RPPR=758.683;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=348;SRP=758.683;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:69:65,4:65:2610:4:153:0,-6.63405,-220.891 0/0:81:79,2:79:3187:2:82:0,-16.6038,-279.107 0/1:62:55,7:55:2221:7:281:-6.99811,0,-181.388 0/0:100:100,0:100:4008:0:0:0,-30.103,-360.695 0/0:29:29,0:29:1173:0:0:0,-8.72987,-105.845 0/0:20:20,0:20:798:0:0:0,-6.0206,-72.1364 dDocent_Contig_11803 12 . C T 417.05 . AB=0.283582;ABP=30.2671;AC=4;AF=0.333333;AN=12;AO=19;CIGAR=1X;DP=114;DPB=114;DPRA=0.712766;EPP=44.2683;EPPR=209.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.157895;PAIREDR=0.894737;PAO=0;PQA=0;PQR=0;PRO=0;QA=750;QR=3843;RO=95;RPL=0;RPP=44.2683;RPPR=209.3;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=95;SRP=209.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:14:5,9:5:204:9:358:-28.3658,0,-14.5296 0/1:18:16,2:16:641:2:78:-1.98424,0,-52.6026 0/1:16:14,2:14:573:2:82:-2.9632,0,-47.0948 0/1:19:13,6:13:527:6:232:-15.5264,0,-42.0561 0/0:24:24,0:24:974:0:0:0,-7.22472,-87.9532 0/0:23:23,0:23:924:0:0:0,-6.92369,-83.4616 dDocent_Contig_11804 7 . C A 211.716 . AB=0.214286;ABP=42.7172;AC=3;AF=0.25;AN=12;AO=14;CIGAR=1X;DP=106;DPB=106;DPRA=1.90909;EPP=33.4109;EPPR=200.614;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.785714;PAIREDR=0.824176;PAO=0;PQA=0;PQR=0;PRO=0;QA=544;QR=3493;RO=91;RPL=0;RPP=33.4109;RPPR=200.614;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=91;SRP=200.614;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:26,2:26:1003:2:78:0,-1.02537,-83.1775 0/1:28:19,8:19:720:8:311:-19.8546,0,-56.6285 0/0:10:10,0:10:375:0:0:0,-3.0103,-34.0985 0/1:21:18,3:18:693:3:116:-4.49607,0,-56.3817 0/0:12:12,0:12:468:0:0:0,-3.61236,-42.4726 0/1:7:6,1:6:234:1:39:-1.78935,0,-19.3239 dDocent_Contig_11805 16 . A G 391.912 . AB=0.229885;ABP=58.1457;AC=3;AF=0.25;AN=12;AO=20;CIGAR=1X;DP=210;DPB=210;DPRA=0.707317;EPP=46.4397;EPPR=415.59;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.547368;PAO=0;PQA=0;PQR=0;PRO=0;QA=764;QR=7561;RO=190;RPL=0;RPP=46.4397;RPPR=415.59;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=190;SRP=415.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1602:0:0:0,-12.3422,-144.408 0/0:47:47,0:47:1887:0:0:0,-14.1484,-170.033 0/1:20:18,2:18:713:2:77:-1.28854,0,-58.477 0/0:35:35,0:35:1398:0:0:0,-10.536,-126.076 0/1:38:23,15:23:929:15:565:-39.7409,0,-72.4747 0/1:29:26,3:26:1032:3:122:-2.64262,0,-84.4387 dDocent_Contig_11806 15 . T C 4838.39 . AB=0.509317;ABP=3.25307;AC=6;AF=0.5;AN=12;AO=164;CIGAR=1X;DP=322;DPB=322;DPRA=0;EPP=359.132;EPPR=346.103;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6559;QR=6292;RO=158;RPL=0;RPP=359.132;RPPR=346.103;RPR=164;RUN=1;SAF=164;SAP=359.132;SAR=0;SRF=158;SRP=346.103;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:34,20:34:1347:20:786:-54.8014,0,-105.235 0/1:50:36,14:36:1438:14:539:-33.7884,0,-114.614 0/1:21:14,7:14:556:7:285:-19.7028,0,-44.0568 0/1:36:26,10:26:1028:10:402:-25.7004,0,-81.9758 0/1:91:22,69:22:877:69:2777:-222.635,0,-51.843 0/1:70:26,44:26:1046:44:1770:-138.433,0,-73.3587 dDocent_Contig_11807 1 . N G 597.108 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=19;CIGAR=1X;DP=19;DPB=19;DPRA=0;EPP=36.0395;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=0.0526316;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=647;QR=0;RO=0;RPL=0;RPP=44.2683;RPPR=0;RPR=19;RUN=1;SAF=1;SAP=36.0395;SAR=18;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:9:0,9:0:0:9:292:-26.5928,-2.70927,0 1/1:6:0,6:0:0:6:217:-19.8807,-1.80618,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:138:-12.76,-1.20412,0 ./.:.:.:.:.:.:.:. dDocent_Contig_11809 15 . T C 35.5166 . AB=0.15;ABP=24.2907;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=141;DPB=141;DPRA=0.826446;EPP=9.52472;EPPR=302.673;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.789855;PAO=0;PQA=0;PQR=0;PRO=0;QA=119;QR=5535;RO=138;RPL=0;RPP=9.52472;RPPR=302.673;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=138;SRP=302.673;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:31,0:31:1222:0:0:0,-9.33193,-110.248 0/0:24:24,0:24:965:0:0:0,-7.22472,-87.1485 0/0:17:17,0:17:682:0:0:0,-5.11751,-61.7091 0/0:31:31,0:31:1250:0:0:0,-9.33193,-112.765 0/0:18:18,0:18:734:0:0:0,-5.41854,-66.383 0/1:20:17,3:17:682:3:119:-5.07441,0,-55.6891 dDocent_Contig_11812 11 . T A 1433.27 . AB=0.183246;ABP=335.916;AC=6;AF=0.5;AN=12;AO=74;CIGAR=1X;DP=387;DPB=387;DPRA=77.2;EPP=163.699;EPPR=682.681;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2932;QR=12588;RO=313;RPL=0;RPP=163.699;RPPR=682.681;RPR=74;RUN=1;SAF=74;SAP=163.699;SAR=0;SRF=313;SRP=682.681;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:81:69,12:69:2775:12:473:-18.5339,0,-225.475 0/1:69:59,10:59:2367:10:376:-13.4147,0,-192.413 0/1:146:128,18:128:5136:18:703:-19.6345,0,-418.142 0/1:86:56,30:56:2269:30:1219:-84.0904,0,-178.475 1/1:4:0,4:0:0:4:161:-14.8753,-1.20412,0 0/0:1:1,0:1:41:0:0:0,-0.30103,-4.09457 dDocent_Contig_11813 11 . G A 396.871 . AB=0.169014;ABP=138.131;AC=2;AF=0.166667;AN=12;AO=25;CIGAR=1X;DP=421;DPB=421;DPRA=1.1701;EPP=57.2971;EPPR=862.913;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997475;PAO=0;PQA=0;PQR=0;PRO=0;QA=984;QR=15718;RO=396;RPL=0;RPP=57.2971;RPPR=862.913;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=396;SRP=862.913;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:56:56,0:56:2215:0:0:0,-16.8577,-199.517 0/0:31:31,0:31:1220:0:0:0,-9.33193,-110.069 0/1:63:48,15:48:1926:15:587:-34.201,0,-154.566 0/1:79:70,9:70:2778:9:357:-8.7079,0,-226.349 0/0:85:84,1:84:3373:1:40:0,-21.5919,-299.619 0/0:107:107,0:107:4206:0:0:0,-32.2102,-378.508 dDocent_Contig_11814 209 . N G 111.879 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=120;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:120:-11.1873,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11815 177 . C T 97.3965 . AB=0.2;ABP=10.8276;AC=3;AF=0.3;AN=10;AO=4;CIGAR=1X;DP=130;DPB=130;DPRA=0.152542;EPP=3.0103;EPPR=259.52;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.968254;PAO=0;PQA=0;PQR=0;PRO=0;QA=148;QR=4919;RO=126;RPL=0;RPP=11.6962;RPPR=242.975;RPR=4;RUN=1;SAF=2;SAP=3.0103;SAR=2;SRF=2;SRP=259.52;SRR=124;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1322:0:0:0,-10.536,-119.233 0/0:39:39,0:39:1536:0:0:0,-11.7402,-138.482 0/0:44:44,0:44:1738:0:0:0,-13.2453,-156.638 0/1:10:8,2:8:323:2:78:-4.393,0,-26.4283 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.64712,-0.60206,0 dDocent_Contig_11816 9 . C T 117.462 . AB=0.166667;ABP=49.335;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=242;DPB=242;DPRA=1.46939;EPP=29.068;EPPR=502.449;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.965217;PAO=0;PQA=0;PQR=0;PRO=0;QA=458;QR=8891;RO=230;RPL=0;RPP=29.068;RPPR=502.449;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=230;SRP=502.449;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:38,1:38:1468:1:39:0,-7.84361,-128.499 0/0:57:54,3:54:2089:3:115:0,-6.43382,-177.514 0/1:48:40,8:40:1538:8:304:-13.2691,0,-124.239 0/0:48:48,0:48:1857:0:0:0,-14.4494,-167.376 0/0:31:31,0:31:1205:0:0:0,-9.33193,-108.745 0/0:19:19,0:19:734:0:0:0,-5.71957,-66.3914 dDocent_Contig_11817 19 . G A 45.1151 . AB=0.176471;ABP=18.4661;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=396;DPB=396;DPRA=0.224274;EPP=3.73412;EPPR=697.195;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=0;PAIREDR=0.862245;PAO=0;PQA=0;PQR=0;PRO=0;QA=118;QR=15272;RO=392;RPL=0;RPP=9.52472;RPPR=854.227;RPR=3;RUN=1;SAF=2;SAP=3.73412;SAR=1;SRF=373;SRP=697.195;SRR=19;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:88:88,0:88:3415:0:0:0,-26.4906,-307.392 0/0:67:67,0:67:2629:0:0:0,-20.169,-236.737 0/0:54:54,0:54:2133:0:0:0,-16.2556,-192.155 0/0:137:137,0:137:5333:0:0:0,-41.2411,-479.83 0/0:33:33,0:33:1272:0:0:0,-9.93399,-114.746 0/1:17:13,3:13:490:3:118:-6.03437,0,-39.5284 dDocent_Contig_11818 33 . C G 24912.5 . AB=0.0677966;ABP=1247.48;AC=0;AF=0;AN=12;AO=69;CIGAR=1X1M1X3M;DP=1016;DPB=1016;DPRA=0;EPP=152.842;EPPR=326.56;GTI=0;LEN=1;MEANALT=4.16667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2641;QR=5657;RO=149;RPL=0;RPP=152.842;RPPR=326.56;RPR=69;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=149;SRP=326.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:226:50,27,4,143:50:1889:27,4,143:1035,155,5598:-445.178,-375.294,-521.985,-447.496,-517.38,-601.112,0,-69.8803,-142.085,-111.771 0|0:272:65,18,0,188:65:2445:18,0,188:690,0,7375:-586.885,-549.828,-744.717,-606.452,-750.136,-806.76,0,-143.68,-200.306,-143.712 0|0:183:20,5,0,155:20:782:5,0,155:186,0,6004:-487.157,-477.955,-540.744,-493.178,-542.25,-557.472,0,-49.1177,-64.341,-17.6813 0|0:164:10,11,0,139:10:388:11,0,139:417,0,5471:-456.958,-425.785,-454.352,-459.968,-457.663,-491.847,-9.96361,-7.66476,-41.8432,0 0|0:86:0,2,9,75:0:0:2,9,75:79,353,2998:-275.968,-269.467,-268.865,-246.938,-240.437,-244.229,-29.0282,-22.5268,0,-6.45097 0|0:85:4,6,1,73:4:153:6,1,73:234,40,2893:-246.327,-228.297,-239.045,-244.236,-237.556,-256.49,-9.42351,-2.73942,-18.6791,0 dDocent_Contig_11819 209 . N G 97.0818 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=97;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:40:-3.99568,-0.30103,0 1/1:2:0,2:0:0:2:57:-5.40982,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11820 10 . T C 1034.3 . AB=0.333333;ABP=48.6112;AC=6;AF=0.5;AN=12;AO=63;CIGAR=2X;DP=189;DPB=189;DPRA=0;EPP=139.813;EPPR=231.015;GTI=0;LEN=1;MEANALT=1.5;MQM=18.3651;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2535;QR=4098;RO=105;RPL=0;RPP=139.813;RPPR=231.015;RPR=63;RUN=1;SAF=63;SAP=139.813;SAR=0;SRF=105;SRP=231.015;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:21:15,6,0:15:586:6,0:238,0:-4.19496,0,-46.7558,-8.71041,-48.5619,-57.0243 0|1:80:60,17,3:60:2334:17,3:694,123:-5.20725,0,-186.647,-13.0834,-181.611,-204.122 0|1:16:12,4,0:12:473:4,0:160,0:-1.55721,0,-38.1046,-5.16956,-39.3087,-44.2507 0|1:30:18,12,0:18:705:12,0:477,0:-12.537,0,-54.7463,-17.9555,-58.3587,-76.039 1|0:29:0,17,12:0:0:17,12:680,485:-61.3446,-40.3703,-35.2527,-21.2818,0,-17.6694 1|0:13:0,7,6:0:0:7,6:286,242:-29.342,-20.3353,-18.2281,-9.30578,0,-7.4996 dDocent_Contig_11821 29 . C A 295.393 . AB=0.210526;ABP=58.3257;AC=3;AF=0.3;AN=10;AO=17;CIGAR=1X;DP=114;DPB=114;DPRA=5.45;EPP=39.9253;EPPR=213.643;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0.941176;PAIREDR=0.958763;PAO=0;PQA=0;PQR=0;PRO=0;QA=668;QR=3856;RO=97;RPL=0;RPP=39.9253;RPPR=213.643;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=97;SRP=213.643;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:17,4:17:677:4:151:-7.6315,0,-54.937 0/1:23:17,6:17:680:6:234:-14.5029,0,-54.603 0/1:32:26,6:26:1035:6:244:-12.7059,0,-83.8115 0/0:33:32,1:32:1283:1:39:0,-6.03743,-111.838 ./.:.:.:.:.:.:.:. 0/0:5:5,0:5:181:0:0:0,-1.50515,-16.634 dDocent_Contig_11825 9 . C T 941.109 . AB=0.198444;ABP=206.005;AC=4;AF=0.333333;AN=12;AO=59;CIGAR=1X;DP=381;DPB=381;DPRA=3.42857;EPP=131.127;EPPR=702.224;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2281;QR=12351;RO=322;RPL=0;RPP=131.127;RPPR=702.224;RPR=59;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=322;SRP=702.224;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:30,12:30:1136:12:462:-29.2874,0,-89.8946 0/1:52:39,13:39:1504:13:503:-29.9652,0,-119.979 0/1:27:20,7:20:768:7:273:-16.8102,0,-61.3193 0/0:21:21,0:21:810:0:0:0,-6.32163,-73.2257 0/1:136:117,19:117:4494:19:732:-25.2699,0,-363.576 0/0:103:95,8:95:3639:8:311:0,-2.65178,-299.269 dDocent_Contig_11826 78 . T A 2539.45 . AB=0.488;ABP=3.16665;AC=4;AF=0.333333;AN=12;AO=96;CIGAR=1X;DP=271;DPB=271;DPRA=2.21;EPP=211.472;EPPR=380.846;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3282;QR=6185;RO=174;RPL=96;RPP=211.472;RPPR=380.846;RPR=0;RUN=1;SAF=96;SAP=211.472;SAR=0;SRF=174;SRP=380.846;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:430:0:0:0,-3.61236,-39.0399 0/0:61:60,1:60:2143:1:35:0,-14.8642,-189.638 0/0:38:38,0:38:1336:0:0:0,-11.4391,-120.536 0/1:82:60,22:60:2133:22:759:-43.9455,0,-167.551 1/1:35:0,34:0:0:34:1155:-104.175,-10.235,0 0/1:43:4,39:4:143:39:1333:-107.322,0,-0.27707 dDocent_Contig_11827 9 . C A 70.1661 . AB=0.170213;ABP=47.41;AC=3;AF=0.25;AN=12;AO=12;CIGAR=1X;DP=161;DPB=161;DPRA=0;EPP=29.068;EPPR=326.56;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=436;QR=5710;RO=149;RPL=0;RPP=29.068;RPPR=326.56;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=149;SRP=326.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:5:3,2:3:112:2:49:-3.14941,0,-8.94075 0/0:34:32,2:32:1228:2:77:0,-2.92588,-103.505 0/1:31:27,4:27:1040:4:156:-5.08536,0,-84.5746 0/0:48:47,1:47:1798:1:39:0,-10.5529,-158.175 0/1:11:9,2:9:346:2:77:-3.99781,0,-28.1871 0/0:32:31,1:31:1186:1:38:0,-5.83569,-103.238 dDocent_Contig_11828 1 . N G 114.653 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:123:-11.4648,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11829 9 . C T 14130.8 . AB=0.0477048;ABP=1977.12;AC=7;AF=0.583333;AN=12;AO=53;CIGAR=1X6M;DP=1111;DPB=1111;DPRA=0;EPP=118.098;EPPR=339.589;GTI=0;LEN=1;MEANALT=12.5;MQM=58.1887;MQMR=60;NS=6;NUMALT=6;ODDS=0;PAIRED=0.0566038;PAIREDR=0.877419;PAO=0;PQA=0;PQR=0;PRO=0;QA=1996;QR=6061;RO=155;RPL=0;RPP=118.098;RPPR=339.589;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=155;SRP=339.589;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:193:48,16,71,10,11,6,14:48:1852:16,71,10,11,6,14:613,2537,402,366,232,539:-187.977,-153.312,-300.583,0,-102.973,-130.713,-169.295,-272.269,-118.955,-318.373,-174.443,-277.415,-124.105,-293.399,-323.218,-183.369,-286.342,-133.029,-302.326,-307.472,-333.65,-158.18,-261.153,-107.84,-277.137,-282.283,-291.21,-306.053 0|1:277:44,12,129,4,6,18,26:44:1730:12,129,4,6,18,26:397,4820,160,243,685,994:-378.637,-361.642,-500.337,0,-112.076,-103.482,-378.702,-490.769,-129.134,-519.806,-371.971,-484.038,-122.403,-501.099,-512.473,-335.853,-447.921,-86.285,-464.981,-458.25,-472.743,-310.332,-422.4,-60.763,-439.46,-432.729,-396.612,-444.814 0|1:141:36,5,56,0,9,4,14:36:1425:5,56,0,9,4,14:189,2100,0,367,156,564:-159.158,-154.84,-270.624,0,-102.135,-100.431,-169.995,-272.129,-117.289,-287.283,-139.723,-241.859,-87.0181,-257.013,-254.303,-157.171,-259.305,-104.465,-274.459,-244.189,-273.255,-123.504,-225.64,-70.7998,-240.794,-210.524,-227.971,-236.58 0|1:177:21,20,92,0,4,9,20:21:818:20,92,0,4,9,20:763,3448,0,149,313,813:-274.199,-220.235,-281.446,0,-6.95034,-39.5395,-280.521,-287.467,-67.2342,-347.752,-268.328,-275.274,-55.0416,-335.559,-334.355,-255.621,-262.567,-42.3366,-322.852,-310.66,-320.143,-213.457,-220.404,-0.165995,-280.689,-268.497,-255.79,-274.669 1|0:172:2,17,101,0,8,15,18:2:77:17,101,0,8,15,18:657,2591,0,312,571,688:-235.645,-183.337,-184.543,-49.8476,-3.26805,-25.7663,-236.247,-189.66,-56.1704,-242.57,-210.871,-164.284,-30.7979,-217.195,-214.787,-189.404,-142.816,-9.33377,-195.727,-170.351,-191.212,-180.068,-133.48,0,-186.392,-161.016,-139.547,-180.974 1|1:151:4,29,70,0,12,1,20:4:159:29,70,0,12,1,20:1081,1667,0,458,39,793:-188.636,-103.167,-107.532,-73.5583,0,-65.5783,-189.84,-116.262,-86.6504,-202.934,-153.079,-79.4974,-49.8962,-166.173,-162.561,-186.634,-113.055,-83.4444,-199.728,-162.966,-199.427,-124.56,-50.9757,-21.3796,-137.655,-100.891,-134.448,-131.634 dDocent_Contig_11830 9 . C G 140.003 . AB=0.2;ABP=34.2795;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=178;DPB=178;DPRA=1.86957;EPP=26.8965;EPPR=363.475;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9699;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=398;QR=6371;RO=166;RPL=0;RPP=26.8965;RPPR=363.475;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=166;SRP=363.475;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:40:32,8:32:1228:8:299:-15.2221,0,-98.7734 0/0:43:42,0:42:1607:0:0:0,-12.6433,-144.515 0/0:35:35,0:35:1357:0:0:0,-10.536,-122.413 0/0:46:43,3:43:1641:3:99:0,-4.6116,-138.712 0/0:4:4,0:4:150:0:0:0,-1.20412,-13.8647 0/0:10:10,0:10:388:0:0:0,-3.0103,-35.2779 dDocent_Contig_11831 44 . A T 741.073 . AB=0.13253;ABP=100.36;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=4M1X18M;DP=109;DPB=77.9565;DPRA=4.15;EPP=26.8965;EPPR=141.985;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.272727;PAIREDR=0.859375;PAO=0;PQA=0;PQR=0;PRO=0;QA=427;QR=2518;RO=64;RPL=11;RPP=26.8965;RPPR=141.985;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=64;SRP=141.985;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:5:5,0,0:5:194:0,0:0,0:0,-1.50515,-17.8321,-1.50515,-17.8321,-17.8321 0|1:18:13,2,3:13:515:2,3:67,120:-6.01048,-4.52458,-46.3086,0,-37.0249,-41.5389 0|0:20:6,10,4:6:239:10,4:352,154:-26.8226,0,-16.6787,-15.9748,-7.04969,-34.4691 0|0:31:26,3,2:26:1023:3,2:106,80:-0.777384,0,-83.244,-1.99564,-77.5567,-85.5825 0|0:21:9,12,0:9:351:12,0:423,0:-32.0802,0,-25.6277,-34.7895,-29.2401,-63.6559 0|0:14:5,7,2:5:196:7,2:223,73:-16.4114,0,-14.0302,-11.9424,-10.1813,-27.4891 dDocent_Contig_11832 13 . T C 2999.86 . AB=0.42915;ABP=13.7797;AC=6;AF=0.5;AN=12;AO=106;CIGAR=1X2M;DP=247;DPB=247;DPRA=0;EPP=233.186;EPPR=289.645;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.396226;PAIREDR=0.484848;PAO=0;PQA=0;PQR=0;PRO=0;QA=4250;QR=5111;RO=132;RPL=0;RPP=233.186;RPPR=289.645;RPR=106;RUN=1;SAF=106;SAP=233.186;SAR=0;SRF=132;SRP=289.645;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:44:16,5,23:16:617:5,23:199,922:-71.1463,-59.5779,-108.731,0,-34.2665,-43.731 0|1:43:22,0,21:22:855:0,21:0,850:-63.8664,-70.4891,-140.738,0,-70.6453,-64.3237 0|1:37:18,0,19:18:698:0,19:0,770:-58.4805,-63.8991,-121.235,0,-57.7317,-52.0121 0|1:49:29,0,19:29:1116:0,19:0,765:-54.3224,-63.0523,-154.658,0,-91.6012,-85.8816 0|1:33:22,1,10:22:861:1,10:41,394:-25.7733,-29.0104,-99.503,0,-67.3928,-67.7674 0|1:41:25,0,14:25:964:0,14:0,549:-37.6188,-45.1445,-124.298,0,-79.1579,-74.9435 dDocent_Contig_11833 11 . T G 219.574 . AB=0.391304;ABP=5.3706;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X2M1X4M1X1M5X;DP=124;DPB=125.067;DPRA=0.455446;EPP=22.5536;EPPR=241.872;GTI=0;LEN=1;MEANALT=2;MQM=47.2222;MQMR=60;NS=6;NUMALT=2;ODDS=3.46945e-18;PAIRED=0;PAIREDR=0.681818;PAO=0;PQA=0;PQR=0;PRO=0;QA=349;QR=4279;RO=110;RPL=0;RPP=22.5536;RPPR=241.872;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=110;SRP=241.872;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:12:12,0,0:12:461:0,0:0,0:0,-3.61236,-41.8388,-3.61236,-41.8388,-41.8388 0|0:25:25,0,0:25:974:0,0:0,0:0,-7.52575,-87.968,-7.52575,-87.968,-87.968 0|0:20:19,0,0:19:748:0,0:0,0:0,-5.71957,-67.269,-5.71957,-67.269,-67.269 0|0:44:43,0,0:43:1664:0,0:0,0:0,-12.9443,-149.91,-12.9443,-149.91,-149.91 0|1:4:1,3,0:1:39:3,0:113,0:-9.22979,0,-2.69244,-9.53082,-3.59553,-12.741 0|1:19:10,6,2:10:393:6,2:236,78:-15.935,0,-30.5963,-12.5231,-25.9871,-44.2764 dDocent_Contig_11834 16 . C T 35.2851 . AB=0.136364;ABP=28.2783;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=150;DPB=150;DPRA=0.785714;EPP=16.0391;EPPR=315.702;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.673611;PAO=0;PQA=0;PQR=0;PRO=0;QA=245;QR=5749;RO=144;RPL=0;RPP=16.0391;RPPR=315.702;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=144;SRP=315.702;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:19,3:19:749:3:122:-4.74983,0,-61.1095 0/0:34:34,0:34:1359:0:0:0,-10.235,-122.571 0/0:17:16,1:16:633:1:41:0,-1.02294,-53.2088 0/0:27:25,2:25:1016:2:82:0,-0.348132,-83.9528 0/0:25:25,0:25:1000:0:0:0,-7.52575,-90.298 0/0:25:25,0:25:992:0:0:0,-7.52575,-89.5798 dDocent_Contig_11835 209 . N G 75.9287 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=80;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:80:-7.59179,-0.60206,0 dDocent_Contig_11836 10 . C A 449.607 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=7;CIGAR=1X2M1X1M1X;DP=333;DPB=333;DPRA=0;EPP=18.2106;EPPR=600.165;GTI=0;LEN=1;MEANALT=3;MQM=11;MQMR=60;NS=6;NUMALT=3;ODDS=2.77556e-17;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=269;QR=10596;RO=275;RPL=0;RPP=18.2106;RPPR=600.165;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=275;SRP=600.165;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:78:75,1,0,1:75:2869:1,0,1:36,0,39:0,-21.9575,-257.15,-22.5772,-257.451,-258.135,-19.2996,-254.245,-254.929,-254.628 0|0:63:48,0,0,12:48:1853:0,0,12:0,0,391:-17.1069,-31.5563,-183.781,-31.5563,-183.781,-183.781,0,-152.23,-152.23,-148.618 0|0:51:40,0,4,6:40:1527:0,4,6:0,155,170:-1.38878,-13.43,-138.747,-0.663558,-126.011,-124.807,0,-125.272,-112.537,-123.465 0|0:64:50,0,0,13:50:1950:0,0,13:0,0,457:-22.3638,-37.4153,-197.749,-37.4153,-197.749,-197.749,0,-160.564,-160.564,-156.651 0|0:43:35,6,0,1:35:1350:6,0,1:233,0,25:0,-6.45841,-115.707,-10.536,-117.513,-121.606,-8.5697,-115.568,-119.66,-119.359 0|0:34:27,0,0,7:27:1047:0,0,7:0,0,229:-10.6908,-18.8186,-104.886,-18.8186,-104.886,-104.886,0,-86.4066,-86.4066,-84.2994 dDocent_Contig_11837 22 . T G 493.041 . AB=0.15493;ABP=223.308;AC=5;AF=0.416667;AN=12;AO=33;CIGAR=1X;DP=267;DPB=267;DPRA=0.788889;EPP=74.6689;EPPR=511.135;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.545455;PAIREDR=0.594017;PAO=0;PQA=0;PQR=0;PRO=0;QA=1320;QR=9380;RO=234;RPL=0;RPP=74.6689;RPPR=511.135;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=234;SRP=511.135;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:54,0:54:2164:0:0:0,-16.2556,-194.933 0/1:63:50,13:50:2009:13:516:-27.8202,0,-162.03 0/1:42:36,6:36:1454:6:242:-9.51369,0,-118.461 0/1:38:35,3:35:1419:3:123:-0.0256485,0,-116.519 0/1:29:24,5:24:952:5:204:-10.0142,0,-77.2481 0/1:41:35,6:35:1382:6:235:-9.1772,0,-112.291 dDocent_Contig_11838 13 . G C 10203.1 . AB=0.0471963;ABP=3814.09;AC=0;AF=0;AN=12;AO=101;CIGAR=1X2M1X;DP=2140;DPB=2140;DPRA=0;EPP=222.329;EPPR=3188.56;GTI=0;LEN=1;MEANALT=8;MQM=59.9208;MQMR=59.9973;NS=6;NUMALT=2;ODDS=0;PAIRED=0.980198;PAIREDR=0.952965;PAO=0;PQA=0;PQR=0;PRO=0;QA=3979;QR=57288;RO=1467;RPL=0;RPP=222.329;RPPR=3188.56;RPR=101;RUN=1;SAF=101;SAP=222.329;SAR=0;SRF=1467;SRP=3188.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:281:201,14,51:201:7824:14,51:546,2043:-107.81,-123.442,-762.213,0,-598.117,-627.641 0|0:419:282,18,101:282:11005:18,101:722,4024:-246.477,-271.883,-1171.07,0,-845.141,-874.221 0|0:431:294,21,83:294:11483:21,83:807,3308:-183.907,-206.176,-1143.82,0,-877.737,-918.987 0|0:397:262,20,89:262:10232:20,89:794,3515:-210.345,-223.849,-1058.95,0,-775.754,-814.328 0|0:207:160,4,35:160:6274:4,35:162,1382:-65.5597,-100.365,-615.116,0,-502.615,-505.437 0|0:405:268,24,92:268:10470:24,92:948,3624:-217.438,-220.103,-1073.58,0,-782.698,-833.014 dDocent_Contig_11840 10 . C A 406.506 . AB=0.131868;ABP=324.364;AC=4;AF=0.333333;AN=12;AO=41;CIGAR=1X;DP=434;DPB=434;DPRA=0;EPP=92.0407;EPPR=856.399;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.959288;PAO=0;PQA=0;PQR=0;PRO=0;QA=1621;QR=15709;RO=393;RPL=0;RPP=92.0407;RPPR=856.399;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=393;SRP=856.399;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:49:44,5:44:1774:5:196:-3.26404,0,-145.122 0/0:75:71,4:71:2860:4:152:0,-8.53008,-243.442 0/1:72:61,11:61:2433:11:440:-18.2787,0,-197.435 0/1:50:42,8:42:1674:8:313:-13.4802,0,-135.834 0/1:102:90,12:90:3577:12:480:-12.8456,0,-291.249 0/0:86:85,1:85:3391:1:40:0,-21.8929,-301.24 dDocent_Contig_11842 126 . G A 1590.8 . AB=0.351111;ABP=46.3336;AC=6;AF=0.5;AN=12;AO=79;CIGAR=1X;DP=225;DPB=225;DPRA=0;EPP=174.557;EPPR=320.045;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2623;QR=4921;RO=146;RPL=0;RPP=174.557;RPPR=320.045;RPR=79;RUN=1;SAF=0;SAP=174.557;SAR=79;SRF=0;SRP=320.045;SRR=146;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:29:18,11:18:624:11:373:-25.1677,0,-47.7558 0/1:46:30,16:30:992:16:529:-34.0775,0,-75.7349 0/1:37:24,13:24:836:13:430:-27.8803,0,-64.4214 0/1:24:21,3:21:711:3:101:-2.19901,0,-57.0816 0/1:41:22,19:22:738:19:628:-44.4883,0,-54.3911 0/1:48:31,17:31:1020:17:562:-36.4453,0,-77.6506 dDocent_Contig_11844 21 . C A 4102.58 . AB=0.621622;ABP=17.2716;AC=7;AF=0.583333;AN=12;AO=122;CIGAR=2X;DP=165;DPB=165;DPRA=0;EPP=267.93;EPPR=83.3548;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=6.93889e-18;PAIRED=0.754098;PAIREDR=0.972973;PAO=0;PQA=0;PQR=0;PRO=0;QA=4807;QR=1442;RO=37;RPL=0;RPP=267.93;RPPR=83.3548;RPR=122;RUN=1;SAF=122;SAP=267.93;SAR=0;SRF=37;SRP=83.3548;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:12:6,6,0:6:245:6,0:241,0:-18.4543,0,-18.8171,-20.2605,-20.6233,-40.4793 0|1:38:13,25,0:13:486:25,0:995,0:-78.4115,0,-32.6322,-82.3249,-40.1579,-122.101 0|1:22:10,12,0:10:392:12,0:470,0:-36.0267,0,-29.0131,-39.037,-32.6255,-71.2711 0|1:23:7,16,0:7:283:16,0:639,0:-50.9212,0,-18.9199,-53.0284,-23.7364,-76.3625 1|1:54:1,53,0:1:36:53,0:2075,0:-183.359,-12.6573,0,-183.66,-15.9546,-186.597 1|0:16:0,10,6:0:0:10,6:387,244:-52.307,-20.5326,-17.5223,-32.1732,0,-30.367 dDocent_Contig_11845 22 . C T 787.598 . AB=0.127168;ABP=629.637;AC=2;AF=0.166667;AN=12;AO=84;CIGAR=1X;DP=1195;DPB=1195;DPRA=2.28297;EPP=185.414;EPPR=2415.52;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3364;QR=44100;RO=1111;RPL=0;RPP=185.414;RPPR=2415.52;RPR=84;RUN=1;SAF=84;SAP=185.414;SAR=0;SRF=1111;SRP=2415.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:312:294,18:294:11614:18:723:0,-28.5265,-979.09 0/0:136:136,0:136:5368:0:0:0,-40.9401,-482.98 0/0:74:74,0:74:2949:0:0:0,-22.2762,-265.498 0/0:154:154,0:154:6143:0:0:0,-46.3586,-552.633 0/1:305:260,45:260:10353:45:1806:-70.937,0,-839.275 0/1:214:193,21:193:7673:21:835:-11.0446,0,-625.744 dDocent_Contig_11847 21 . T A 370.528 . AB=0.194175;ABP=86.6858;AC=2;AF=0.166667;AN=12;AO=24;CIGAR=1X;DP=271;DPB=271;DPRA=1.58462;EPP=55.1256;EPPR=472.127;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.846154;PAO=0;PQA=0;PQR=0;PRO=0;QA=941;QR=9808;RO=247;RPL=0;RPP=55.1256;RPPR=539.364;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=239;SRP=472.127;SRR=8;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:65:62,3:62:2471:3:116:0,-8.74993,-211.719 0/0:30:30,0:30:1195:0:0:0,-9.0309,-107.823 0/1:21:18,3:18:710:3:122:-5.05086,0,-57.9044 0/0:35:35,0:35:1381:0:0:0,-10.536,-124.547 0/1:82:65,17:65:2577:17:662:-35.2237,0,-207.372 0/0:38:37,1:37:1474:1:41:0,-7.34457,-128.811 dDocent_Contig_11848 34 . C T 94.2214 . AB=0.134328;ABP=80.8268;AC=3;AF=0.25;AN=12;AO=12;CIGAR=1X;DP=147;DPB=147;DPRA=1.66176;EPP=29.068;EPPR=296.159;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=479;QR=5394;RO=135;RPL=0;RPP=29.068;RPPR=296.159;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=135;SRP=296.159;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:995:0:0:0,-7.52575,-89.8474 0/1:34:30,4:30:1204:4:153:-3.9041,0,-98.398 0/1:21:17,4:17:657:4:163:-8.7368,0,-53.1264 0/0:46:43,3:43:1732:3:122:0,-2.47489,-144.723 0/1:12:11,1:11:448:1:41:-0.482207,0,-37.0636 0/0:9:9,0:9:358:0:0:0,-2.70927,-32.581 dDocent_Contig_11850 60 . A G 1451.64 . AB=0.0888889;ABP=69.0713;AC=3;AF=0.25;AN=12;AO=52;CIGAR=1X;DP=285;DPB=285;DPRA=1.56757;EPP=115.927;EPPR=508.963;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1989;QR=8903;RO=233;RPL=52;RPP=115.927;RPPR=508.963;RPR=0;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=233;SRP=508.963;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:48,0:48:1838:0:0:0,-14.4494,-165.641 0/0:87:81,6:81:3102:6:233:0,-4.85077,-257.96 0/0:61:61,0:61:2311:0:0:0,-18.3628,-208.172 0/1:45:41,4:41:1576:4:151:-0.409998,0,-128.54 0/0:2:2,0:2:76:0:0:0,-0.60206,-7.21354 1/1:42:0,42:0:0:42:1605:-144.685,-12.6433,0 dDocent_Contig_11851 7 . C T 76.0822 . AB=0.217391;ABP=18.9659;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=1X;DP=88;DPB=88;DPRA=1.37838;EPP=18.2106;EPPR=153.807;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.925926;PAO=0;PQA=0;PQR=0;PRO=0;QA=266;QR=3096;RO=81;RPL=0;RPP=18.2106;RPPR=178.9;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=78;SRP=153.807;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:8:8,0:8:307:0:0:0,-2.40824,-27.9912 0/1:17:14,3:14:536:3:113:-5.42146,0,-43.4666 0/0:17:17,0:17:656:0:0:0,-5.11751,-59.3772 0/0:28:26,2:26:1000:2:77:0,-1.1197,-83.0009 0/0:12:12,0:12:447:0:0:0,-3.61236,-40.5721 0/1:6:4,2:4:150:2:76:-5.40849,0,-12.0596 dDocent_Contig_11852 15 . G T 953.044 . AB=0.240223;ABP=107.932;AC=4;AF=0.333333;AN=12;AO=44;CIGAR=1X;DP=226;DPB=226;DPRA=2.625;EPP=98.5551;EPPR=398.218;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.704545;PAIREDR=0.5;PAO=0;PQA=0;PQR=0;PRO=0;QA=1763;QR=7250;RO=182;RPL=0;RPP=98.5551;RPPR=398.218;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=182;SRP=398.218;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:30,1:30:1200:1:41:0,-5.23736,-104.175 0/1:52:47,5:47:1880:5:194:-2.17497,0,-153.75 0/0:16:16,0:16:633:0:0:0,-4.81648,-57.3034 0/1:44:37,7:37:1468:7:263:-10.7716,0,-119.121 0/1:38:21,17:21:837:17:691:-51.0791,0,-64.2032 0/1:45:31,14:31:1232:14:574:-38.4547,0,-97.6007 dDocent_Contig_11853 66 . G T 45.4386 . AB=0.230769;ABP=11.1951;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=82;DPB=82;DPRA=0.942029;EPP=9.52472;EPPR=174.557;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.696203;PAO=0;PQA=0;PQR=0;PRO=0;QA=107;QR=3043;RO=79;RPL=0;RPP=9.52472;RPPR=174.557;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=174.557;SRR=79;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:387:0:0:0,-3.0103,-35.1873 0/0:25:25,0:25:948:0:0:0,-7.52575,-85.63 0/0:2:2,0:2:78:0:0:0,-0.60206,-7.40347 0/1:13:10,3:10:390:3:107:-6.06654,0,-31.5453 0/0:17:17,0:17:659:0:0:0,-5.11751,-59.6472 0/0:15:15,0:15:581:0:0:0,-4.51545,-52.6328 dDocent_Contig_11854 12 . C T 1719.76 . AB=0.4625;ABP=3.98746;AC=5;AF=0.5;AN=10;AO=58;CIGAR=1X2M1X3M1X;DP=110;DPB=110;DPRA=3.1875;EPP=128.956;EPPR=115.927;GTI=0;LEN=1;MEANALT=1;MQM=59.5862;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2272;QR=2025;RO=52;RPL=0;RPP=128.956;RPPR=115.927;RPR=58;RUN=1;SAF=58;SAP=128.956;SAR=0;SRF=52;SRP=115.927;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:34:16,18:16:623:18:708:-53.8169,0,-46.1646 1|1:22:1,21:1:40:21:821:-70.2148,-2.62698,0 0|0:8:8,0:8:322:0:0:0,-2.40824,-29.3489 0|1:25:13,12:13:497:12:471:-34.7235,0,-37.549 .:.:.:.:.:.:.:. 0|1:21:14,7:14:543:7:272:-18.5217,0,-42.8913 dDocent_Contig_11856 194 . C T 9215.82 . AB=0.750643;ABP=215.273;AC=3;AF=0.375;AN=8;AO=292;CIGAR=1X;DP=454;DPB=454;DPRA=1.99487;EPP=637.08;EPPR=354.789;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11601;QR=6419;RO=162;RPL=292;RPP=637.08;RPPR=354.789;RPR=0;RUN=1;SAF=0;SAP=637.08;SAR=292;SRF=0;SRP=354.789;SRR=162;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:204:45,159:45:1788:159:6285:-503.989,0,-99.7251 0/1:142:41,101:41:1621:101:4042:-321.016,0,-103.379 0/0:65:65,0:65:2573:0:0:0,-19.5669,-231.7 0/1:43:11,32:11:437:32:1274:-101.975,0,-26.7389 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11857 13 . A T 262.974 . AB=0.344828;ABP=9.07545;AC=1;AF=0.1;AN=10;AO=10;CIGAR=1X;DP=314;DPB=314;DPRA=0.407018;EPP=24.725;EPPR=663.138;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=403;QR=12148;RO=304;RPL=0;RPP=24.725;RPPR=663.138;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=304;SRP=663.138;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:62:62,0:62:2460:0:0:0,-18.6639,-221.548 0/0:119:119,0:119:4780:0:0:0,-35.8226,-430.096 0/0:57:57,0:57:2264:0:0:0,-17.1587,-203.925 0/0:47:47,0:47:1888:0:0:0,-14.1484,-170.122 ./.:.:.:.:.:.:.:. 0/1:29:19,10:19:756:10:403:-27.8995,0,-59.6318 dDocent_Contig_11858 21 . G A 340.898 . AB=0.333333;ABP=13.8677;AC=3;AF=0.25;AN=12;AO=15;CIGAR=1X;DP=89;DPB=89;DPRA=1.02273;EPP=35.5824;EPPR=163.699;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=575;QR=2920;RO=74;RPL=0;RPP=35.5824;RPPR=163.699;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=74;SRP=163.699;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1040:0:0:0,-8.12781,-93.8792 0/1:32:24,8:24:964:8:312:-18.8061,0,-77.4281 0/1:5:1,4:1:41:4:140:-11.4308,0,-2.58942 0/1:8:5,3:5:201:3:123:-9.05655,0,-16.0623 0/0:9:9,0:9:350:0:0:0,-2.70927,-31.8574 0/0:8:8,0:8:324:0:0:0,-2.40824,-29.5294 dDocent_Contig_11859 98 . N A 1186.64 . AB=0.266667;ABP=24.2907;AC=12;AF=1;AN=12;AO=12;CIGAR=9X1M;DP=48;DPB=48.5;DPRA=0;EPP=29.068;EPPR=0;GTI=0;LEN=1;MEANALT=2.4;MQM=57.5;MQMR=0;NS=6;NUMALT=3;ODDS=0;PAIRED=0.333333;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=461;QR=0;RO=0;RPL=0;RPP=29.068;RPPR=0;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:2:0,0,1,1:0:0:0,1,1:0,38,39:-6.70708,-6.70708,-6.70708,-3.59553,-3.59553,-3.2945,-3.49624,-3.49624,0,-3.19521 1|1:15:0,4,4,7:0:0:4,4,7:151,152,267:-34.0499,-21.8664,-20.6623,-21.8404,-9.65843,-20.6363,-12.211,-0.0264519,0,-10.1038 1|1:16:0,8,7,1:0:0:8,7,1:297,262,39:-44.8125,-20.8602,-18.452,-23.9323,0,-21.8251,-41.6051,-17.6512,-20.7238,-41.3041 1|1:3:0,1,1,0:0:0:1,1,0:38,37,0:-6.17768,-3.0601,-2.75907,-3.14106,0,-2.84003,-6.17768,-3.0601,-3.14106,-6.17768 1|1:9:0,0,7,2:0:0:0,7,2:0,264,77:-28.3376,-28.3376,-28.3376,-6.70708,-6.70708,-4.59987,-22.0135,-22.0135,0,-21.4114 1|1:3:0,2,0,1:0:0:2,0,1:75,0,39:-9.70526,-3.59553,-2.99347,-9.70526,-3.59553,-9.70526,-6.49399,0,-6.49399,-6.19296 dDocent_Contig_11860 85 . A G 289.396 . AB=0.190909;ABP=94.2911;AC=3;AF=0.25;AN=12;AO=22;CIGAR=1X;DP=231;DPB=231;DPRA=0.6;EPP=50.7827;EPPR=454.677;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.727273;PAIREDR=0.677885;PAO=0;PQA=0;PQR=0;PRO=0;QA=768;QR=7252;RO=208;RPL=14;RPP=6.56362;RPPR=11.1951;RPR=8;RUN=1;SAF=14;SAP=6.56362;SAR=8;SRF=118;SRP=11.1951;SRR=90;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:51:51,0:51:1766:0:0:0,-15.3525,-159.222 0/1:28:20,8:20:667:8:282:-17.293,0,-51.9128 0/0:16:15,1:15:537:1:32:0,-1.61717,-45.466 0/1:44:39,5:39:1378:5:175:-2.84838,0,-111.072 0/1:38:30,8:30:1060:8:279:-14.0099,0,-84.2709 0/0:54:53,0:53:1844:0:0:0,-15.9546,-166.07 dDocent_Contig_11861 57 . A G 38.3336 . AB=0.113636;ABP=60.0608;AC=1;AF=0.1;AN=10;AO=5;CIGAR=1X;DP=204;DPB=204;DPRA=1.1;EPP=13.8677;EPPR=435.133;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=200;QR=7820;RO=199;RPL=5;RPP=13.8677;RPPR=435.133;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=199;SRP=435.133;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:44:39,5:39:1539:5:200:-5.13422,0,-125.515 0/0:34:34,0:34:1343:0:0:0,-10.235,-121.139 0/0:79:79,0:79:3113:0:0:0,-23.7814,-280.271 0/0:44:44,0:44:1720:0:0:0,-13.2453,-155.034 0/0:3:3,0:3:105:0:0:0,-0.90309,-9.78978 ./.:.:.:.:.:.:.:. dDocent_Contig_11862 46 . T C 178.349 . AB=0.242424;ABP=22.0271;AC=1;AF=0.125;AN=8;AO=8;CIGAR=1X;DP=107;DPB=107;DPRA=1.33784;EPP=3.0103;EPPR=217.986;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=0.875;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=320;QR=3942;RO=99;RPL=4;RPP=3.0103;RPPR=217.986;RPR=4;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=99;SRP=217.986;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:25,8:25:1000:8:320:-19.2328,0,-80.3623 0/0:37:37,0:37:1478:0:0:0,-11.1381,-133.268 0/0:24:24,0:24:951:0:0:0,-7.22472,-85.8889 0/0:13:13,0:13:513:0:0:0,-3.91339,-46.5155 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11864 7 . C A 82.8704 . AB=0.153846;ABP=43.6001;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=220;DPB=220;DPRA=0.910256;EPP=24.725;EPPR=459.02;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.3;PAIREDR=0.628571;PAO=0;PQA=0;PQR=0;PRO=0;QA=386;QR=8103;RO=210;RPL=0;RPP=24.725;RPPR=459.02;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=210;SRP=459.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:39:33,6:33:1262:6:232:-9.50889,0,-102.131 0/0:36:34,2:34:1315:2:78:0,-3.43361,-111.233 0/0:27:26,1:26:1002:1:37:0,-4.42998,-86.7923 0/0:40:39,1:39:1507:1:39:0,-8.14463,-132.005 0/0:36:36,0:36:1386:0:0:0,-10.8371,-125.022 0/0:42:42,0:42:1631:0:0:0,-12.6433,-147.052 dDocent_Contig_11865 51 . T G 658.158 . AB=0.0333333;ABP=513.741;AC=0;AF=0;AN=12;AO=18;CIGAR=17M1X;DP=415;DPB=413.611;DPRA=0;EPP=42.0968;EPPR=571.936;GTI=0;LEN=1;MEANALT=6.33333;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=116;QR=8464;RO=262;RPL=0;RPP=42.0968;RPPR=571.936;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=262;SRP=571.936;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:39:16,0,4,0,2,16:16:518:0,4,0,2,16:0,41,0,20,347:-21.68,-26.4964,-68.3468,-24.0269,-65.8765,-64.6724,-26.4964,-68.3468,-65.8765,-68.3468,-25.3061,-67.1563,-64.6879,-67.1563,-66.5543,0,-41.9508,-39.4968,-41.9508,-40.7675,-37.1343 0|0:71:34,5,3,8,2,14:34:1087:5,3,8,2,14:175,34,190,12,398:-21.3908,-17.37,-103.488,-29.4798,-102.844,-116.184,-16.9353,-90.3075,-102.403,-102.143,-31.1579,-104.522,-116.616,-104.081,-118.163,0,-73.3931,-85.4904,-72.9543,-87.1682,-83.424 0|0:102:68,6,3,0,2,15:68:2287:6,3,0,2,15:174,18,0,12,375:-8.79711,-15.3987,-198.993,-28.564,-200.089,-213.035,-29.2671,-200.799,-213.939,-214.648,-28.7981,-200.326,-213.465,-214.175,-213.573,0,-171.577,-184.718,-185.426,-184.954,-180.911 0|0:58:30,0,0,6,3,19:30:933:0,0,6,3,19:0,0,152,18,399:-21.1697,-30.2006,-105.177,-30.2006,-105.177,-105.177,-18.3148,-93.3054,-93.3054,-91.4992,-29.5009,-104.471,-104.471,-92.6007,-103.568,0,-75.0144,-75.0144,-63.1477,-74.3161,-69.2949 0|0:59:48,0,2,0,5,4:48:1538:0,2,0,5,4:0,12,0,30,102:0,-14.4494,-138.539,-13.9873,-138.069,-137.467,-14.4494,-138.539,-138.069,-138.539,-13.3137,-137.365,-136.896,-137.365,-135.86,-6.40381,-130.566,-130.097,-130.566,-129.394,-129.362 0|0:86:66,0,3,0,4,8:66:2101:0,3,0,4,8:0,18,0,24,218:0,-19.868,-189.164,-19.1681,-188.455,-187.552,-19.868,-189.164,-188.455,-189.164,-18.9362,-188.219,-187.511,-188.219,-187.015,-2.5837,-171.958,-171.25,-171.958,-171.014,-169.55 dDocent_Contig_11866 19 . G A 213.594 . AB=0.12426;ABP=210.251;AC=3;AF=0.25;AN=12;AO=21;CIGAR=1X;DP=271;DPB=271;DPRA=1.65686;EPP=48.6112;EPPR=511.691;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.832;PAO=0;PQA=0;PQR=0;PRO=0;QA=848;QR=9896;RO=250;RPL=0;RPP=48.6112;RPPR=545.878;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=246;SRP=511.691;SRR=4;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:27,4:27:1054:4:162:-5.63503,0,-85.819 0/0:43:43,0:43:1712:0:0:0,-12.9443,-154.304 0/0:35:35,0:35:1397:0:0:0,-10.536,-125.99 0/0:24:24,0:24:946:0:0:0,-7.22472,-85.44 0/1:85:73,12:73:2893:12:483:-18.2335,0,-234.898 0/1:53:48,5:48:1894:5:203:-2.69847,0,-154.708 dDocent_Contig_11867 28 . C T 117.714 . AB=0.155556;ABP=49.3833;AC=3;AF=0.25;AN=12;AO=7;CIGAR=1X4M;DP=119;DPB=119;DPRA=1.125;EPP=18.2106;EPPR=233.186;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.428571;PAIREDR=0.650943;PAO=0;PQA=0;PQR=0;PRO=0;QA=270;QR=4154;RO=106;RPL=0;RPP=18.2106;RPPR=233.186;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=106;SRP=233.186;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:14:12,2,0:12:456:2,0:79,0:-3.28282,0,-37.1682,-6.89518,-37.7703,-44.273 0|1:19:16,0,3:16:634:0,3:0,123:-5.74522,-10.5617,-62.7346,0,-52.5802,-51.6771 0|0:30:30,0,0:30:1178:0,0:0,0:0,-9.0309,-106.305,-9.0309,-106.305,-106.305 0|1:26:18,4,4:18:688:4,4:162,147:-7.95845,0,-55.2562,-1.38165,-44.449,-56.6073 0|0:10:10,0,0:10:401:0,0:0,0:0,-3.0103,-36.4496,-3.0103,-36.4496,-36.4496 0|0:20:20,0,0:20:797:0,0:0,0:0,-6.0206,-72.0494,-6.0206,-72.0494,-72.0494 dDocent_Contig_11868 16 . T A 32.1733 . AB=0.0921053;ABP=222.672;AC=1;AF=0.0833333;AN=12;AO=37;CIGAR=1X;DP=689;DPB=689;DPRA=1.04144;EPP=83.3548;EPPR=1418.81;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.998466;PAO=0;PQA=0;PQR=0;PRO=0;QA=1459;QR=25938;RO=652;RPL=0;RPP=83.3548;RPPR=1418.81;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=652;SRP=1418.81;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:152:138,14:138:5497:14:554:-4.43879,0,-448.802 0/0:100:96,4:96:3809:4:157:0,-15.5946,-328.311 0/0:83:76,7:76:2988:7:265:0,-0.778952,-244.798 0/0:126:119,7:119:4715:7:285:0,-11.9054,-398.256 0/0:111:111,0:111:4439:0:0:0,-33.4143,-399.448 0/0:117:112,5:112:4490:5:198:0,-17.0255,-385.831 dDocent_Contig_11869 37 . A C 8540.82 . AB=0.0652174;ABP=78.5398;AC=0;AF=0;AN=12;AO=3;CIGAR=1M1X6M;DP=484;DPB=448.75;DPRA=0.438095;EPP=9.52472;EPPR=430.79;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=0;PAIREDR=0.426396;PAO=0;PQA=0;PQR=0;PRO=0;QA=122;QR=7705;RO=197;RPL=0;RPP=9.52472;RPPR=430.79;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=197;SRP=430.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:40:40,0,0:40:1544:0,0:0,0:0,-12.0412,-139.216,-12.0412,-139.216,-139.216 0|0:46:32,8,3:32:1254:8,3:308,122:-15.6509,0,-100.709,-15.215,-93.053,-117.434 0|0:32:19,12,0:19:758:12,0:483,0:-34.283,0,-59.0129,-40.0026,-62.6253,-102.437 0|0:36:30,6,0:30:1174:6,0:234,0:-10.5904,0,-95.1109,-19.6213,-96.9171,-116.149 0|0:170:1,166,0:1:40:166,0:6338,0:-566.259,-46.6775,0,-566.56,-49.971,-569.855 0|0:160:75,82,0:75:2935:82,0:3134,0:-234.52,0,-216.624,-257.097,-241.308,-498.411 dDocent_Contig_11871 107 . N A 281.141 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=282;QR=0;RO=0;RPL=0;RPP=22.5536;RPPR=0;RPR=9;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:2:0,2:0:0:2:49:-4.65416,-0.60206,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 1/1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 1/1:2:0,2:0:0:2:66:-6.26836,-0.60206,0 dDocent_Contig_11872 171 . T G 1191.88 . AB=0.432692;ABP=7.10269;AC=5;AF=0.416667;AN=12;AO=45;CIGAR=1M4D2M1X;DP=107;DPB=84.5;DPRA=6.93333;EPP=100.727;EPPR=137.642;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.622222;PAIREDR=0.870968;PAO=0;PQA=0;PQR=0;PRO=0;QA=1754;QR=2397;RO=62;RPL=45;RPP=100.727;RPPR=137.642;RPR=0;RUN=1;SAF=0;SAP=100.727;SAR=45;SRF=0;SRP=137.642;SRR=62;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:23:7,16:7:279:16:628:-49.931,0,-18.558 0|1:11:9,2:9:348:2:82:-4.46835,0,-28.3666 0|0:3:3,0:3:120:0:0:0,-0.90309,-11.1879 0|1:6:1,5:1:40:5:195:-16.1168,0,-2.1895 0|1:25:20,5:20:769:5:196:-10.489,0,-62.0054 0|1:39:22,17:22:841:17:653:-47.3596,0,-64.267 dDocent_Contig_11873 13 . T C 43.572 . AB=0.125;ABP=51.8684;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=215;DPB=215;DPRA=1.28723;EPP=22.5536;EPPR=450.334;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=358;QR=8234;RO=206;RPL=0;RPP=22.5536;RPPR=450.334;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=206;SRP=450.334;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:25,1:25:1016:1:40:0,-3.8311,-87.7351 0/0:39:39,0:39:1575:0:0:0,-11.7402,-141.984 0/0:55:52,3:52:2076:3:123:0,-5.09186,-175.563 0/1:40:35,5:35:1381:5:195:-5.88006,0,-112.509 0/0:34:34,0:34:1348:0:0:0,-10.235,-121.586 0/0:21:21,0:21:838:0:0:0,-6.32163,-75.7354 dDocent_Contig_11876 22 . T C 4521.26 . AB=0.106061;ABP=91.9749;AC=9;AF=0.75;AN=12;AO=11;CIGAR=1X3M;DP=348;DPB=348;DPRA=1.36735;EPP=26.8965;EPPR=61.6401;GTI=0;LEN=1;MEANALT=3;MQM=14.9091;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=164;QR=1050;RO=27;RPL=0;RPP=26.8965;RPPR=61.6401;RPR=11;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=27;SRP=61.6401;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:65:10,55,0:10:382:55,0:2152,0:-81.0691,0,-15.1661,-84.0794,-31.7227,-115.448 0|1:66:6,53,7:6:238:53,7:2078,105:-70.632,0,-3.76473,-66.9558,-14.3778,-84.4622 0|1:33:6,27,0:6:233:27,0:1064,0:-33.7153,0,-11.4053,-35.5215,-19.5331,-54.7046 1|1:71:5,60,3:5:197:60,3:2366,45:-84.2544,-1.74655,0,-83.4099,-15.7629,-98.7295 1|1:49:0,49,0:0:0:49,0:1934,0:-83.003,-14.7505,0,-83.003,-14.7505,-83.003 1|1:64:0,62,1:0:0:62,1:2457,14:-104.673,-18.6639,0,-103.978,-18.0172,-103.677 dDocent_Contig_11877 1 . N G 77.8076 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11878 25 . C T 1120.87 . AB=0.283951;ABP=68.6906;AC=3;AF=0.25;AN=12;AO=47;CIGAR=1X;DP=240;DPB=240;DPRA=2.16667;EPP=105.07;EPPR=422.104;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=58.601;NS=6;NUMALT=1;ODDS=0;PAIRED=0.978723;PAIREDR=0.906736;PAO=0;PQA=0;PQR=0;PRO=0;QA=1874;QR=7785;RO=193;RPL=0;RPP=105.07;RPPR=422.104;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=193;SRP=422.104;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:32,1:32:1291:1:40:0,-5.93831,-112.458 0/1:68:44,24:44:1771:24:949:-65.2409,0,-137.352 0/1:56:38,18:38:1535:18:723:-48.5376,0,-119.827 0/1:38:34,4:34:1382:4:162:-3.52782,0,-112.341 0/0:22:22,0:22:871:0:0:0,-6.62266,-78.6961 0/0:23:23,0:23:935:0:0:0,-6.92369,-83.1734 dDocent_Contig_11879 98 . N G 128.454 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=132;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:98:-9.14405,-0.90309,0 dDocent_Contig_11882 63 . A G 168.482 . AB=0.7;ABP=6.48466;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=295;DPB=295;DPRA=0.609023;EPP=26.8965;EPPR=617.537;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.272727;PAIREDR=0.989399;PAO=0;PQA=0;PQR=0;PRO=0;QA=382;QR=9778;RO=283;RPL=11;RPP=26.8965;RPPR=617.537;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=283;SRP=617.537;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:68:67,0:67:2290:0:0:0,-20.169,-206.292 0/0:65:65,0:65:2200:0:0:0,-19.5669,-198.267 0/0:62:60,2:60:2114:2:70:0,-12.0165,-183.882 0/0:90:88,2:88:3076:2:68:0,-20.6348,-270.612 0/1:5:2,3:2:67:3:103:-8.10487,0,-4.85789 0/1:5:1,4:1:31:4:141:-11.5319,0,-1.5943 dDocent_Contig_11883 12 . C G 337.796 . AB=0.176991;ABP=105.415;AC=2;AF=0.166667;AN=12;AO=21;CIGAR=1X;DP=364;DPB=364;DPRA=0.784314;EPP=48.6112;EPPR=747.825;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=821;QR=13765;RO=343;RPL=0;RPP=48.6112;RPPR=747.825;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=343;SRP=747.825;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:49:49,0:49:1964:0:0:0,-14.7505,-176.954 0/0:47:46,1:46:1855:1:40:0,-10.1527,-163.156 0/1:76:69,7:69:2749:7:279:-2.60236,0,-224.64 0/1:37:24,13:24:967:13:502:-34.3813,0,-76.1837 0/0:58:58,0:58:2334:0:0:0,-17.4597,-210.216 0/0:97:97,0:97:3896:0:0:0,-29.1999,-350.624 dDocent_Contig_11885 21 . G A 123.926 . AB=0.125;ABP=110.498;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=515;DPB=515;DPRA=0.893382;EPP=42.0968;EPPR=1082.23;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.995976;PAO=0;PQA=0;PQR=0;PRO=0;QA=722;QR=19794;RO=497;RPL=0;RPP=42.0968;RPPR=1082.23;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=497;SRP=1082.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:56,3:56:2234:3:123:0,-6.29598,-189.765 0/0:78:78,0:78:3133:0:0:0,-23.4803,-282.038 0/1:88:77,11:77:3064:11:445:-13.9154,0,-249.346 0/0:96:92,4:92:3687:4:154:0,-14.6686,-317.614 0/0:102:102,0:102:4035:0:0:0,-30.7051,-363.141 0/0:92:92,0:92:3641:0:0:0,-27.6948,-327.721 dDocent_Contig_11886 34 . A G 421.578 . AB=0.135135;ABP=45.7942;AC=0;AF=0;AN=12;AO=10;CIGAR=1M1X4M1X;DP=541;DPB=534;DPRA=0.599138;EPP=24.725;EPPR=1036.63;GTI=0;LEN=1;MEANALT=3.5;MQM=24;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=240;QR=18587;RO=476;RPL=0;RPP=24.725;RPPR=1036.63;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=476;SRP=1036.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:102:94,5,1:94:3657:5,1:120,41:0,-20.4171,-319.499,-24.8898,-317.62,-325.254 0|0:124:111,0,13:111:4340:0,13:0,489:-7.02556,-40.4399,-397.254,0,-357.191,-353.278 0|0:101:92,0,8:92:3620:0,8:0,292:0,-27.6948,-325.505,-3.85001,-301.658,-299.25 0|0:131:121,0,8:121:4723:0,8:0,286:0,-36.4246,-424.685,-13.1394,-401.372,-398.964 0|0:46:36,0,9:36:1400:0,9:0,356:-18.4571,-29.2942,-144.336,0,-115.037,-112.327 0|0:37:22,5,9:22:847:5,9:120,346:-21.897,-20.6235,-88.6777,0,-61.777,-66.9831 dDocent_Contig_11887 35 . T C 701.091 . AB=0.275862;ABP=53.6281;AC=5;AF=0.416667;AN=12;AO=32;CIGAR=1X;DP=129;DPB=129;DPRA=1.78462;EPP=72.4974;EPPR=213.643;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1249;QR=3722;RO=97;RPL=0;RPP=72.4974;RPPR=213.643;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=97;SRP=213.643;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:9:6,3:6:229:3:123:-8.75552,0,-18.2633 0/1:17:12,5:12:462:5:187:-12.0712,0,-36.8095 0/1:37:22,15:22:852:15:578:-41.2087,0,-65.8598 0/1:42:35,7:35:1318:7:282:-13.1091,0,-106.249 0/1:11:9,2:9:351:2:79:-4.18591,0,-28.6393 0/0:13:13,0:13:510:0:0:0,-3.91339,-46.2487 dDocent_Contig_11889 107 . N T 375.899 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=12;CIGAR=1X;DP=12;DPB=12;DPRA=0;EPP=29.068;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=387;QR=0;RO=0;RPL=0;RPP=29.068;RPPR=0;RPR=12;RUN=1;SAF=0;SAP=29.068;SAR=12;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:4:0,4:0:0:4:112:-10.3562,-1.20412,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:3:0,3:0:0:3:103:-9.61002,-0.90309,0 dDocent_Contig_11891 93 . C A 72.5494 . AB=0.131579;ABP=92.6121;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=1X;DP=445;DPB=445;DPRA=1.16045;EPP=57.2971;EPPR=915.029;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.68;PAIREDR=0.707143;PAO=0;PQA=0;PQR=0;PRO=0;QA=866;QR=14677;RO=420;RPL=25;RPP=57.2971;RPPR=915.029;RPR=0;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=420;SRP=915.029;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:73:67,6:67:2319:6:208:0,-2.9156,-189.917 0/0:86:78,8:78:2692:8:275:0,-0.80375,-217.45 0/0:76:75,1:75:2644:1:35:0,-19.3796,-234.71 0/1:76:66,10:66:2307:10:348:-8.77771,0,-185.011 0/0:43:43,0:43:1495:0:0:0,-12.9443,-134.84 0/0:91:91,0:91:3220:0:0:0,-27.3937,-290.026 dDocent_Contig_11892 7 . C A 857.625 . AB=0.258503;ABP=77.4756;AC=5;AF=0.416667;AN=12;AO=39;CIGAR=1X1M1X;DP=228;DPB=228;DPRA=0.925;EPP=87.6977;EPPR=413.419;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1487;QR=7231;RO=189;RPL=0;RPP=87.6977;RPPR=413.419;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=189;SRP=413.419;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:54:54,0:54:2064:0:0:0,-16.2556,-185.999 0|1:14:8,6:8:309:6:228:-16.6703,0,-23.9585 0|1:105:78,27:78:2985:27:1039:-62.2109,0,-237.213 0|1:28:23,5:23:884:5:182:-8.30543,0,-71.4518 0|0:26:26,0:26:989:0:0:0,-7.82678,-89.3226 1|1:1:0,1:0:0:1:38:-3.79727,-0.30103,0 dDocent_Contig_11893 140 . A G 745.61 . AB=0.233766;ABP=97.8219;AC=5;AF=0.416667;AN=12;AO=36;CIGAR=1X;DP=167;DPB=167;DPRA=2.36923;EPP=81.1833;EPPR=287.473;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.972222;PAIREDR=0.839695;PAO=0;PQA=0;PQR=0;PRO=0;QA=1406;QR=5079;RO=131;RPL=0;RPP=81.1833;RPPR=287.473;RPR=36;RUN=1;SAF=0;SAP=81.1833;SAR=36;SRF=0;SRP=287.473;SRR=131;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:15,5:15:603:5:202:-12.5415,0,-48.587 0/1:31:19,12:19:768:12:474:-33.6747,0,-60.1086 0/1:28:23,5:23:874:5:201:-10.0421,0,-70.5379 0/0:13:13,0:13:490:0:0:0,-3.91339,-44.429 0/1:38:27,11:27:1027:11:407:-25.5234,0,-81.2798 0/1:37:34,3:34:1317:3:122:-0.234383,0,-107.656 dDocent_Contig_11894 129 . G A 66.2061 . AB=0.25;ABP=13.8677;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=80;DPB=80;DPRA=1.66667;EPP=13.8677;EPPR=165.871;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=154;QR=2434;RO=75;RPL=0;RPP=13.8677;RPPR=165.871;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=165.871;SRR=75;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:456:0:0:0,-4.21442,-41.3534 0/0:18:18,0:18:602:0:0:0,-5.41854,-54.4974 0/0:23:23,0:23:736:0:0:0,-6.92369,-66.5389 0/1:20:15,5:15:478:5:154:-8.14322,0,-37.3046 0/0:3:3,0:3:97:0:0:0,-0.90309,-9.05057 0/0:2:2,0:2:65:0:0:0,-0.60206,-6.17329 dDocent_Contig_11896 10 . G A 378.811 . AB=0.288462;ABP=23.2217;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=315;DPB=315;DPRA=0.930233;EPP=39.9253;EPPR=650.109;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.882353;PAIREDR=0.916107;PAO=0;PQA=0;PQR=0;PRO=0;QA=689;QR=11918;RO=298;RPL=0;RPP=39.9253;RPPR=650.109;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=298;SRP=650.109;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:57:57,0:57:2281:0:0:0,-17.1587,-205.448 0/0:57:57,0:57:2284:0:0:0,-17.1587,-205.719 0/0:40:40,0:40:1581:0:0:0,-12.0412,-142.524 0/0:61:61,0:61:2442:0:0:0,-18.3628,-219.925 0/1:52:37,15:37:1485:15:608:-39.404,0,-118.242 0/0:48:46,2:46:1845:2:81:0,-6.76371,-158.572 dDocent_Contig_11897 12 . T A 1287.03 . AB=0.1664;ABP=607.163;AC=4;AF=0.333333;AN=12;AO=121;CIGAR=1X;DP=1066;DPB=1066;DPRA=0;EPP=265.758;EPPR=2055.05;GTI=0;LEN=1;MEANALT=1;MQM=50.8017;MQMR=55.7746;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4391;QR=33244;RO=945;RPL=0;RPP=265.758;RPPR=2055.05;RPR=121;RUN=1;SAF=121;SAP=265.758;SAR=0;SRF=945;SRP=2055.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:137:113,24:113:4008:24:880:-34.5231,0,-305.907 0/1:272:232,40:232:8158:40:1449:-45.9807,0,-639.439 0/1:99:80,19:80:2836:19:695:-29.3157,0,-223.436 0/1:117:96,21:96:3310:21:773:-26.1056,0,-259.525 0/0:181:180,1:180:6381:1:33:0,-52.993,-572.841 0/0:260:244,16:244:8551:16:561:0,-39.8084,-729.675 dDocent_Contig_11899 10 . G A 2873.07 . AB=0.251004;ABP=271.192;AC=4;AF=0.333333;AN=12;AO=139;CIGAR=1X;DP=780;DPB=780;DPRA=0;EPP=304.845;EPPR=1394.92;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5462;QR=24667;RO=641;RPL=0;RPP=304.845;RPPR=1394.92;RPR=139;RUN=1;SAF=139;SAP=304.845;SAR=0;SRF=641;SRP=1394.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:102:61,41:61:2349:41:1614:-114.792,0,-180.887 0/1:147:94,53:94:3608:53:2088:-143.861,0,-280.549 0/1:124:110,14:110:4264:14:562:-13.5929,0,-346.452 0/1:125:108,17:108:4154:17:662:-22.283,0,-336.254 0/0:166:157,9:157:5992:9:368:0,-16.4856,-505.688 0/0:116:111,5:111:4300:5:168:0,-19.4763,-371.561 dDocent_Contig_11901 57 . A T 289.794 . AB=0.204082;ABP=77.5494;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=272;DPB=272;DPRA=1.12644;EPP=46.4397;EPPR=545.878;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=676;QR=8316;RO=250;RPL=20;RPP=46.4397;RPPR=545.878;RPR=0;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=250;SRP=545.878;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:55:55,0:55:1828:0:0:0,-16.5566,-164.799 0/0:36:36,0:36:1214:0:0:0,-10.8371,-109.561 0/0:24:23,0:23:758:0:0:0,-6.92369,-68.3519 0/0:59:59,0:59:1955:0:0:0,-17.7608,-176.224 0/1:60:47,12:47:1544:12:412:-19.5584,0,-121.409 0/1:38:30,8:30:1017:8:264:-12.6429,0,-80.3988 dDocent_Contig_11902 6 . C T 124.555 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=11;CIGAR=1X5I1X3M1X;DP=11;DPB=75.5;DPRA=0;EPP=26.8965;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=12.3636;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=88;PQA=3437;PQR=0;PRO=0;QA=375;QR=0;RO=0;RPL=0;RPP=26.8965;RPPR=0;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:3:0,3:0:0:3:102:-3.21572,-0.90309,0 1|1:8:0,8:0:0:8:273:-8.93834,-2.40824,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_11903 8 . T G 658.032 . AB=0.547619;ABP=3.83753;AC=1;AF=0.0833333;AN=12;AO=23;CIGAR=1X;DP=512;DPB=512;DPRA=0.446809;EPP=52.9542;EPPR=1064.86;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9796;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=885;QR=18689;RO=489;RPL=0;RPP=52.9542;RPPR=1064.86;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=489;SRP=1064.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:150:150,0:150:5720:0:0:0,-45.1545,-514.768 0/0:91:91,0:91:3486:0:0:0,-27.3937,-313.872 0/0:111:111,0:111:4240:0:0:0,-33.4143,-381.666 0/0:86:86,0:86:3285:0:0:0,-25.8886,-295.791 0/0:32:32,0:32:1224:0:0:0,-9.63296,-110.427 0/1:42:19,23:19:734:23:885:-67.3261,0,-53.7482 dDocent_Contig_11905 49 . C T 54.566 . AB=0.133333;ABP=55.5599;AC=1;AF=0.125;AN=8;AO=16;CIGAR=1X;DP=308;DPB=308;DPRA=0.644444;EPP=37.7539;EPPR=628.424;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=607;QR=11160;RO=292;RPL=0;RPP=37.7539;RPPR=628.424;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=292;SRP=637.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:94:86,8:86:3323:8:305:0,-0.487387,-271.37 0/0:105:105,0:105:4043:0:0:0,-31.6081,-363.935 0/1:45:39,6:39:1451:6:226:-7.15521,0,-117.307 0/0:64:62,2:62:2343:2:76:0,-12.0512,-203.854 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11906 17 . G A 23911 . AB=0.682987;ABP=240.626;AC=12;AF=1;AN=12;AO=576;CIGAR=1X1M;DP=835;DPB=835;DPRA=0;EPP=1253.78;EPPR=96.3836;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=22565;QR=1689;RO=43;RPL=0;RPP=1253.78;RPPR=96.3836;RPR=576;RUN=1;SAF=576;SAP=1253.78;SAR=0;SRF=43;SRP=96.3836;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:145:13,35,97:13:511:35,97:1374,3788:-378.425,-269.334,-300.83,-70.972,0,-83.8034 1|1:256:7,38,211:7:274:38,211:1480,8237:-774.064,-654.535,-665.626,-99.1043,0,-58.1167 1|1:141:9,43,88:9:359:43,88:1664,3444:-387.546,-253.58,-270.203,-107.108,0,-110.185 1|1:177:9,47,121:9:358:47,121:1857,4778:-513.754,-363.66,-378.987,-123.325,0,-116.376 1|1:98:5,52,41:5:187:52,41:2030,1601:-281.67,-116.306,-115.963,-151.573,0,-154.542 1|1:18:0,0,18:0:0:0,18:0,717:-64.8585,-64.8585,-64.8585,-5.41854,-5.41854,0 dDocent_Contig_11907 21 . T C 163.538 . AB=0.135922;ABP=121.598;AC=2;AF=0.166667;AN=12;AO=18;CIGAR=1X;DP=233;DPB=233;DPRA=0;EPP=42.0968;EPPR=467.705;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=719;QR=8576;RO=214;RPL=0;RPP=42.0968;RPPR=467.705;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=214;SRP=467.705;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:39,1:39:1560:1:41:0,-7.94663,-136.537 0/1:17:11,6:11:441:6:234:-16.3109,0,-34.9278 0/0:21:20,1:20:812:1:41:0,-2.22706,-69.2995 0/0:17:16,1:16:642:1:41:0,-1.02294,-54.017 0/1:86:77,8:77:3083:8:321:-3.26075,0,-251.544 0/0:52:51,1:51:2038:1:41:0,-11.559,-179.507 dDocent_Contig_11908 16 . T C 394.877 . AB=0.137168;ABP=261.435;AC=2;AF=0.166667;AN=12;AO=31;CIGAR=1X;DP=457;DPB=457;DPRA=1.95671;EPP=70.3259;EPPR=910.767;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.5563;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.967742;PAIREDR=0.795775;PAO=0;PQA=0;PQR=0;PRO=0;QA=1223;QR=16808;RO=426;RPL=0;RPP=70.3259;RPPR=928.058;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=424;SRP=910.767;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:62:62,0:62:2405:0:0:0,-18.6639,-215.719 0/0:65:65,0:65:2581:0:0:0,-19.5669,-229.612 0/0:38:38,0:38:1499:0:0:0,-11.4391,-135.15 0/0:66:66,0:66:2616:0:0:0,-19.868,-235.573 0/1:127:108,19:108:4238:19:751:-29.6827,0,-342.741 0/1:99:87,12:87:3469:12:472:-13.0269,0,-282.46 dDocent_Contig_11909 70 . T C 1527.83 . AB=0.0853659;ABP=247.91;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X3M1X;DP=182;DPB=182;DPRA=0;EPP=33.4109;EPPR=217.986;GTI=0;LEN=1;MEANALT=2.2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.909091;PAO=0;PQA=0;PQR=0;PRO=0;QA=469;QR=3309;RO=99;RPL=14;RPP=33.4109;RPPR=217.986;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=99;SRP=217.986;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:16:9,1,6:9:302:1,6:34,210:-14.3857,-14.3384,-38.4913,0,-21.7001,-22.6524 0|0:53:28,2,23:28:935:2,23:68,803:-56.898,-59.8116,-134.897,0,-70.1741,-68.7668 0|0:18:5,0,13:5:172:0,13:0,444:-34.8682,-36.3733,-50.3435,0,-14.3133,-10.3999 0|0:30:14,2,14:14:456:2,14:68,481:-34.8489,-33.5478,-69.7505,0,-31.2835,-32.5868 0|0:38:23,5,9:23:770:5,9:166,310:-18.2627,-11.7602,-72.6029,0,-48.9249,-59.6455 0|1:27:20,4,3:20:674:4,3:133,100:-4.74117,0,-53.4195,-2.6672,-46.5299,-56.3883 dDocent_Contig_11911 32 . T C 51.5808 . AB=0.1875;ABP=16.582;AC=1;AF=0.125;AN=8;AO=3;CIGAR=1X;DP=597;DPB=597;DPRA=0.0826162;EPP=9.52472;EPPR=1292.86;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=122;QR=23706;RO=594;RPL=0;RPP=9.52472;RPPR=1292.86;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=594;SRP=1292.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:13,3:13:514:3:122:-6.55601,0,-41.791 0/0:11:11,0:11:436:0:0:0,-3.31133,-39.5918 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 0/0:258:258,0:258:10363:0:0:0,-77.6657,-931.962 0/0:312:312,0:312:12393:0:0:0,-93.9214,-1114.49 dDocent_Contig_11912 7 . C T 1488.04 . AB=0.0526316;ABP=102.098;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=2X1M1X6M;DP=341;DPB=337.6;DPRA=0;EPP=9.52472;EPPR=326.56;GTI=0;LEN=1;MEANALT=10;MQM=60;MQMR=60;NS=6;NUMALT=8;ODDS=0;PAIRED=1;PAIREDR=0.550336;PAO=0;PQA=0;PQR=0;PRO=0;QA=117;QR=5836;RO=149;RPL=0;RPP=9.52472;RPPR=326.56;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=149;SRP=326.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:57:21,0,1,1,10,3,12,0,3:21:828:0,1,1,10,3,12,0,3:0,39,39,388,117,458,0,123:-31.2491,-37.5707,-105.697,-34.3648,-102.492,-102.191,-34.3648,-102.492,-99.2857,-102.191,-5.69332,-73.8201,-70.6143,-70.6143,-70.8098,-27.953,-96.0799,-92.874,-92.874,-64.2026,-95.1768,0,-68.1253,-64.9195,-64.9195,-36.2489,-58.5079,-64.5129,-37.5707,-105.697,-102.492,-102.492,-73.8201,-96.0799,-68.1253,-105.697,-27.4166,-95.5441,-92.3383,-92.3383,-63.6666,-85.9265,-57.9719,-95.5441,-94.6411 0|0:90:49,0,0,1,12,0,13,1,4:49:1929:0,0,1,12,0,13,1,4:0,0,38,468,0,505,41,160:-26.7481,-41.4985,-200.192,-41.4985,-200.192,-200.192,-38.3822,-197.076,-197.076,-196.775,-3.02837,-161.724,-161.724,-158.607,-158.112,-41.4985,-200.192,-200.192,-197.076,-161.724,-200.192,0,-158.695,-158.695,-155.579,-120.227,-158.695,-154.782,-38.1139,-196.808,-196.808,-193.692,-158.34,-196.808,-155.311,-196.507,-28.3178,-187.013,-187.013,-183.896,-148.544,-187.013,-145.515,-183.628,-185.809 0|1:61:32,0,0,2,11,0,3,2,3:32:1250:0,0,2,11,0,3,2,3:0,0,80,434,0,117,81,122:-26.0818,-35.7148,-138.479,-35.7148,-138.479,-138.479,-29.1237,-131.888,-131.888,-131.286,0,-102.767,-102.767,-96.1761,-99.4555,-35.7148,-138.479,-138.479,-131.888,-102.767,-138.479,-26.0969,-128.861,-128.861,-122.27,-93.149,-128.861,-127.958,-29.0344,-131.799,-131.799,-125.208,-96.0869,-131.799,-122.181,-131.197,-25.6494,-128.414,-128.414,-121.824,-92.7024,-128.414,-118.797,-121.735,-127.511 0|0:67:28,0,0,4,6,0,13,1,7:28:1080:0,0,4,6,0,13,1,7:0,0,150,235,0,499,41,278:-32.5312,-40.96,-129.645,-40.96,-129.645,-129.645,-28.6756,-117.36,-117.36,-116.156,-21.6345,-110.32,-110.32,-98.0347,-108.513,-40.96,-129.645,-129.645,-117.36,-110.32,-129.645,0,-88.684,-88.684,-76.3993,-69.3589,-88.684,-84.7706,-37.5753,-126.26,-126.26,-113.975,-106.935,-126.26,-85.2995,-125.959,-18.0717,-106.757,-106.757,-94.4724,-87.4321,-106.757,-65.7965,-103.373,-104.65 0|0:20:4,0,0,0,2,0,9,2,0:4:156:0,0,0,2,0,9,2,0:0,0,0,75,0,331,82,0:-25.8434,-27.0475,-39.873,-27.0475,-39.873,-39.873,-27.0475,-39.873,-39.873,-39.873,-20.9043,-33.7301,-33.7301,-33.7301,-33.128,-27.0475,-39.873,-39.873,-39.873,-33.7301,-39.873,0,-12.8231,-12.8231,-12.8231,-6.68284,-12.8231,-10.1138,-20.2747,-33.1016,-33.1016,-33.1016,-26.9583,-33.1016,-6.0505,-32.4995,-27.0475,-39.873,-39.873,-39.873,-33.7301,-39.873,-12.8231,-33.1016,-39.873 0|0:46:15,6,7,1,3,0,7,2,3:15:593:6,7,1,3,0,7,2,3:225,269,37,118,0,256,82,123:-17.5672,-3.65729,-50.6559,0,-30.3806,-46.6986,-19.0561,-49.4356,-45.7792,-67.5601,-12.3749,-42.755,-39.0985,-58.1539,-60.2774,-22.0827,-52.4621,-48.8058,-67.8611,-61.1805,-70.8878,-1.17101,-31.5502,-27.8937,-46.9483,-40.2677,-49.9747,-47.8675,-15.3128,-45.6929,-42.0364,-61.092,-54.4113,-64.1186,-43.2056,-63.5165,-11.9277,-42.3082,-38.6517,-57.7073,-51.0266,-60.734,-39.821,-53.9647,-59.8309 dDocent_Contig_11913 14 . G T 176.277 . AB=0.368421;ABP=5.8675;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=1X;DP=90;DPB=90;DPRA=0.535211;EPP=18.2106;EPPR=183.243;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=286;QR=3192;RO=83;RPL=0;RPP=18.2106;RPPR=183.243;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=83;SRP=183.243;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:914:0:0:0,-7.22472,-82.5719 0/1:6:1,5:1:40:5:204:-16.9379,0,-2.1895 0/0:4:4,0:4:154:0:0:0,-1.20412,-14.2324 0/0:31:31,0:31:1205:0:0:0,-9.33193,-108.735 0/0:12:12,0:12:456:0:0:0,-3.61236,-41.385 0/1:13:11,2:11:423:2:82:-3.86629,0,-34.5026 dDocent_Contig_11914 64 . G C 191.29 . AB=0.151515;ABP=107.438;AC=2;AF=0.166667;AN=12;AO=21;CIGAR=1X;DP=408;DPB=408;DPRA=0.525126;EPP=48.6112;EPPR=843.37;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.7468;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.857143;PAIREDR=0.589147;PAO=0;PQA=0;PQR=0;PRO=0;QA=794;QR=14346;RO=387;RPL=12;RPP=3.94093;RPPR=18.7717;RPR=9;RUN=1;SAF=12;SAP=3.94093;SAR=9;SRF=220;SRP=18.7717;SRR=167;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:29,9:29:1097:9:349:-20.3272,0,-87.5733 0/1:61:55,6:55:2058:6:217:-1.51487,0,-166.862 0/0:47:43,4:43:1562:4:152:0,-0.100996,-126.783 0/0:63:61,2:61:2242:2:76:0,-11.7514,-194.765 0/0:101:101,0:101:3771:0:0:0,-30.404,-339.487 0/0:98:98,0:98:3616:0:0:0,-29.5009,-325.54 dDocent_Contig_11915 8 . T C 428.123 . AB=0.216981;ABP=76.7584;AC=4;AF=0.333333;AN=12;AO=23;CIGAR=1X;DP=146;DPB=146;DPRA=1.325;EPP=52.9542;EPPR=270.101;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.869565;PAIREDR=0.764228;PAO=0;PQA=0;PQR=0;PRO=0;QA=893;QR=4733;RO=123;RPL=0;RPP=52.9542;RPPR=270.101;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=123;SRP=270.101;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:968:0:0:0,-7.52575,-87.4338 0/1:27:19,8:19:741:8:311:-20.2265,0,-58.8931 0/0:15:15,0:15:574:0:0:0,-4.51545,-52.002 0/1:38:34,4:34:1294:4:153:-2.70247,0,-105.31 0/1:18:16,2:16:615:2:78:-1.98493,0,-50.2706 0/1:23:14,9:14:541:9:351:-25.0281,0,-42.112 dDocent_Contig_11916 50 . A G 1094.71 . AB=0.1;ABP=197.574;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=2X;DP=182;DPB=182;DPRA=0;EPP=33.4109;EPPR=263.587;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.928571;PAIREDR=0.908333;PAO=0;PQA=0;PQR=0;PRO=0;QA=561;QR=4736;RO=120;RPL=14;RPP=33.4109;RPPR=263.587;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=120;SRP=263.587;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:23:6,6,11:6:237:6,11:241,435:-34.3544,-16.2989,-33.993,-0.365743,0,-16.5515 0|0:40:26,1,13:26:1012:1,13:40,492:-32.4806,-37.0107,-119.876,0,-79.8529,-79.235 1|0:8:2,3,3:2:78:3,3:121,121:-12.9484,-3.57639,-9.0791,-3.57618,0,-9.07889 0|0:29:19,3,7:19:746:3,7:119,282:-17.5277,-13.4531,-73.8928,0,-51.5501,-59.2395 0|0:42:34,0,8:34:1344:0,8:0,286:-13.4257,-23.6608,-134.288,0,-110.991,-108.583 0|0:40:33,1,6:33:1319:1,6:40,241:-9.92633,-16.5655,-124.907,0,-105.349,-106.838 dDocent_Contig_11917 21 . C G 100.897 . AB=0.123457;ABP=102.764;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=262;DPB=262;DPRA=2.23757;EPP=24.725;EPPR=550.221;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996032;PAO=0;PQA=0;PQR=0;PRO=0;QA=396;QR=10098;RO=252;RPL=0;RPP=24.725;RPPR=550.221;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=252;SRP=550.221;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:51:51,0:51:2067:0:0:0,-15.3525,-186.207 0/0:21:21,0:21:842:0:0:0,-6.32163,-76.0926 0/0:19:19,0:19:762:0:0:0,-5.71957,-68.8979 0/0:28:28,0:28:1120:0:0:0,-8.42884,-101.081 0/1:81:71,10:71:2822:10:396:-11.6126,0,-229.704 0/0:62:62,0:62:2485:0:0:0,-18.6639,-223.789 dDocent_Contig_11919 30 . T A 883.726 . AB=0.321739;ABP=34.7516;AC=4;AF=0.333333;AN=12;AO=37;CIGAR=1X;DP=143;DPB=143;DPRA=2.05357;EPP=83.3548;EPPR=115.189;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.5849;NS=6;NUMALT=1;ODDS=0;PAIRED=0.432432;PAIREDR=0.641509;PAO=0;PQA=0;PQR=0;PRO=0;QA=1431;QR=4127;RO=106;RPL=0;RPP=83.3548;RPPR=233.186;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=90;SRP=115.189;SRR=16;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:27,10:27:1047:10:393:-24.5898,0,-83.3894 0/1:35:23,12:23:884:12:453:-30.5729,0,-69.3305 0/1:12:10,2:10:393:2:78:-3.79094,0,-30.5587 0/1:31:18,13:18:689:13:507:-36.6396,0,-53.0052 0/0:7:7,0:7:268:0:0:0,-2.10721,-24.4782 0/0:21:21,0:21:846:0:0:0,-6.32163,-76.4528 dDocent_Contig_11920 33 . T C 5583.01 . AB=0.417722;ABP=30.8821;AC=6;AF=0.5;AN=12;AO=198;CIGAR=1X2M;DP=474;DPB=474;DPRA=0;EPP=432.962;EPPR=563.25;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.994949;PAIREDR=0.996124;PAO=0;PQA=0;PQR=0;PRO=0;QA=7850;QR=10145;RO=258;RPL=0;RPP=432.962;RPPR=563.25;RPR=198;RUN=1;SAF=198;SAP=432.962;SAR=0;SRF=258;SRP=563.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:68:33,0,35,0:33:1307:0,35,0:0,1404,0:-106.146,-116.08,-223.649,0,-107.968,-97.4316,-116.08,-223.649,-107.968,-223.649 0|1:98:55,0,42,1:55:2154:0,42,1:0,1621,9:-116.824,-133.38,-310.483,0,-177.391,-164.748,-132.878,-309.977,-176.888,-309.676 0|1:58:33,0,25,0:33:1317:0,25,0:0,1003,0:-73.107,-83.041,-191.501,0,-108.86,-101.334,-83.041,-191.501,-108.86,-191.501 0|1:67:37,9,21,0:37:1486:9,21,0:359,832,0:-57.3343,-38.9067,-158.647,0,-92.8838,-116.127,-68.4724,-161.356,-122.448,-190.921 0|1:74:47,0,21,6:47:1830:0,21,6:0,842,242:-55.2205,-69.3689,-219.74,0,-150.366,-144.045,-49.4201,-199.791,-130.417,-197.985 0|1:109:53,0,54,2:53:2051:0,54,2:0,2148,79:-160.892,-176.847,-345.286,0,-168.436,-152.181,-170.346,-338.785,-161.935,-338.183 dDocent_Contig_11921 25 . G A 71.2884 . AB=0.235294;ABP=13.3567;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=177;DPB=177;DPRA=0.53125;EPP=11.6962;EPPR=378.675;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.947977;PAO=0;PQA=0;PQR=0;PRO=0;QA=149;QR=6948;RO=173;RPL=0;RPP=11.6962;RPPR=378.675;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=173;SRP=378.675;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1389:0:0:0,-10.536,-125.259 0/0:50:50,0:50:2005:0:0:0,-15.0515,-180.639 0/0:24:24,0:24:969:0:0:0,-7.22472,-87.5094 0/0:44:44,0:44:1781:0:0:0,-13.2453,-160.499 0/0:7:7,0:7:283:0:0:0,-2.10721,-25.8432 0/1:17:13,4:13:521:4:149:-8.65172,0,-42.1176 dDocent_Contig_11922 9 . A G 49.8482 . AB=0.666667;ABP=3.73412;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=1X;DP=52;DPB=52;DPRA=0.306122;EPP=7.35324;EPPR=111.584;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=78;QR=1879;RO=50;RPL=0;RPP=7.35324;RPPR=111.584;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=50;SRP=111.584;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:6:6,0:6:229:0:0:0,-1.80618,-20.9753 0/0:13:13,0:13:492:0:0:0,-3.91339,-44.6251 0/0:6:6,0:6:211:0:0:0,-1.80618,-19.3306 0/0:13:13,0:13:482:0:0:0,-3.91339,-43.7192 0/0:11:11,0:11:426:0:0:0,-3.31133,-38.6948 0/1:3:1,2:1:39:2:78:-6.50038,0,-2.99347 dDocent_Contig_11923 18 . T A 4221.3 . AB=0.39557;ABP=32.9436;AC=4;AF=0.333333;AN=12;AO=125;CIGAR=1X2M1X2M1X;DP=316;DPB=315.857;DPRA=0;EPP=274.444;EPPR=228.843;GTI=0;LEN=1;MEANALT=3.33333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.824;PAIREDR=0.894231;PAO=0;PQA=0;PQR=0;PRO=0;QA=4835;QR=4124;RO=104;RPL=0;RPP=274.444;RPPR=228.843;RPR=125;RUN=1;SAF=125;SAP=274.444;SAR=0;SRF=104;SRP=228.843;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:55:22,10,18,5:22:872:10,18,5:383,708,204:-51.6139,-26.8089,-95.5751,0,-40.3519,-66.361,-41.4024,-81.7526,-54.9461,-111.677 0|1:52:17,24,9,1:17:675:24,9,1:943,323,40:-72.4707,0,-48.3692,-51.2618,-29.2703,-104.125,-74.2926,-52.2982,-103.539,-129.567 0|0:49:26,4,15,2:26:1036:4,15,2:160,585,80:-40.2811,-34.9227,-119.045,0,-72.1648,-80.8313,-41.5155,-113.659,-78.7558,-126.238 1|0:48:13,20,15,0:13:517:20,15,0:775,588,0:-65.5316,-5.7787,-42.3286,-21.0908,0,-59.1472,-69.445,-48.3492,-63.6627,-112.015 0|1:37:7,27,1,0:7:270:27,1,0:1026,40,0:-82.0089,0,-14.0323,-80.8204,-18.8639,-102.69,-84.1161,-22.1601,-102.991,-106.287 0|1:75:19,40,16,0:19:754:40,16,0:1548,598,0:-121.446,0,-50.0403,-78.2149,-13.1374,-135.471,-127.166,-62.0815,-140.287,-189.238 dDocent_Contig_11924 8 . T G 10991.2 . AB=0.386364;ABP=42.4916;AC=4;AF=0.333333;AN=12;AO=136;CIGAR=1X3M1X2M1X;DP=460;DPB=460;DPRA=0;EPP=298.331;EPPR=157.185;GTI=0;LEN=1;MEANALT=2.75;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.514706;PAIREDR=0.816901;PAO=0;PQA=0;PQR=0;PRO=0;QA=5295;QR=2789;RO=71;RPL=0;RPP=298.331;RPPR=157.185;RPR=136;RUN=1;SAF=136;SAP=298.331;SAR=0;SRF=71;SRP=157.185;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:86:10,33,38:10:388:33,38:1268,1476:-190.469,-89.395,-111.337,-72.2051,0,-92.6422 1|0:99:8,34,56:8:316:34,56:1323,2180:-259.449,-153.134,-168.903,-82.7136,0,-91.8607 1|0:93:9,43,41:9:350:43,41:1686,1629:-241.295,-105.355,-121.172,-109.893,0,-126.313 1|0:74:3,26,45:3:118:26,45:1018,1765:-218.236,-135.433,-137.313,-73.9979,0,-70.1584 0|0:42:13,0,28:13:510:0,28:0,1103:-86.8585,-90.7719,-132.715,0,-41.9725,-33.5437 0|0:66:28,0,38:28:1107:0,38:0,1485:-114.034,-122.463,-213.566,0,-91.4965,-80.0574 dDocent_Contig_11925 16 . G T 714.835 . AB=0.0484262;ABP=734.523;AC=2;AF=0.166667;AN=12;AO=21;CIGAR=1X1M1X2M1X5M;DP=542;DPB=542;DPRA=1.28493;EPP=48.6112;EPPR=871.599;GTI=0;LEN=1;MEANALT=6.2;MQM=60;MQMR=59.6075;NS=6;NUMALT=6;ODDS=0;PAIRED=0.0952381;PAIREDR=0.3975;PAO=0;PQA=0;PQR=0;PRO=0;QA=822;QR=15556;RO=400;RPL=0;RPP=48.6112;RPPR=871.599;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=400;SRP=871.599;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:93:66,1,6,13,3,0,1:66:2556:1,6,13,3,0,1:40,226,510,96,0,32:-22.0836,-38.6558,-248.28,-23.4378,-230.067,-231.556,0,-206.64,-191.421,-206.021,-34.2297,-240.853,-225.635,-202.208,-243.246,-41.9516,-248.581,-233.362,-209.935,-244.149,-251.876,-39.3847,-246.012,-230.793,-207.366,-241.58,-249.307,-249.006 0|1:98:64,13,3,4,4,3,6:64:2478:13,3,4,4,3,6:520,120,160,164,122,214:-23.5744,0,-199.453,-32.9546,-193.481,-235.416,-29.6596,-190.186,-223.139,-231.82,-29.3667,-189.894,-222.846,-219.552,-231.528,-32.7758,-193.303,-226.255,-222.96,-222.668,-235.237,-25.5886,-186.109,-219.061,-215.766,-215.474,-218.883,-227.14 0|0:130:92,2,3,2,7,0,19:92:3585:2,3,2,7,0,19:80,102,72,284,0,724:-31.0422,-52.1458,-346.127,-50.4715,-338.461,-344.148,-52.8648,-340.856,-339.178,-346.844,-35.3948,-323.391,-321.713,-324.108,-327.874,-58.737,-346.729,-345.051,-347.446,-329.981,-353.319,0,-287.989,-286.311,-288.706,-271.241,-294.579,-288.86 0|0:92:70,2,2,1,3,5,7:70:2742:2,2,1,3,5,7:78,81,40,122,187,270:-0.84003,-15.5004,-240.32,-15.2313,-234.243,-240.052,-18.6165,-237.627,-237.359,-243.738,-11.8809,-230.893,-230.625,-234.01,-236.402,-6.60525,-225.612,-225.344,-228.729,-221.995,-230.519,0,-219.008,-218.74,-222.124,-215.39,-210.109,-223.312 0|0:56:47,2,0,1,4,0,0:47:1831:2,0,1,4,0,0:80,0,40,163,0,0:0,-7.55902,-157.428,-14.1484,-158.03,-164.62,-10.8537,-154.735,-161.325,-161.024,-0.823127,-144.705,-151.295,-148,-150.091,-14.1484,-158.03,-164.62,-161.325,-151.295,-164.62,-14.1484,-158.03,-164.62,-161.325,-151.295,-164.62,-164.62 0|0:73:61,5,1,0,1,0,4:61:2364:5,1,0,1,0,4:199,30,0,40,0,152:0,-1.97088,-194.62,-15.9716,-193.728,-209.808,-18.3628,-196.125,-210.109,-212.506,-15.0923,-192.856,-206.839,-209.237,-208.936,-18.3628,-196.125,-210.109,-212.506,-209.237,-212.506,-5.94132,-183.703,-197.687,-200.084,-196.815,-200.084,-198.88 dDocent_Contig_11926 7 . C A 356.294 . AB=0.188073;ABP=187.247;AC=3;AF=0.25;AN=12;AO=53;CIGAR=1X;DP=391;DPB=391;DPRA=0;EPP=118.098;EPPR=734.797;GTI=0;LEN=1;MEANALT=1.16667;MQM=33.5472;MQMR=59.8309;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0188679;PAIREDR=0.243323;PAO=0;PQA=0;PQR=0;PRO=0;QA=1986;QR=12987;RO=337;RPL=0;RPP=118.098;RPPR=734.797;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=337;SRP=734.797;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:52:45,7:45:1711:7:263:-2.86626,0,-138.592 0/0:65:57,7:57:2202:7:242:0,-2.70384,-181.581 0/1:76:57,19:57:2211:19:730:-25.7686,0,-175.394 0/1:90:75,15:75:2907:15:560:-12.2066,0,-234.702 0/0:29:28,1:28:1082:1:39:0,-4.85111,-93.8066 0/0:79:75,4:75:2874:4:152:0,-12.1987,-247.247 dDocent_Contig_11928 25 . A T 54.0776 . AB=0.148148;ABP=32.0437;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=246;DPB=246;DPRA=1.13913;EPP=26.8965;EPPR=513.306;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.995745;PAO=0;PQA=0;PQR=0;PRO=0;QA=442;QR=9333;RO=235;RPL=0;RPP=26.8965;RPPR=513.306;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=235;SRP=513.306;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:59,0:59:2353:0:0:0,-17.7608,-211.931 0/0:61:57,4:57:2272:4:158:0,-3.76286,-190.05 0/1:27:23,4:23:913:4:163:-6.93062,0,-74.3474 0/0:43:40,3:40:1580:3:121:0,-1.66409,-131.163 0/0:22:22,0:22:874:0:0:0,-6.62266,-78.9713 0/0:34:34,0:34:1341:0:0:0,-10.235,-120.951 dDocent_Contig_11929 163 . G A 261.345 . AB=0.245614;ABP=35.049;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X;DP=204;DPB=204;DPRA=1.74286;EPP=50.7827;EPPR=398.218;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.510989;PAO=0;PQA=0;PQR=0;PRO=0;QA=800;QR=6654;RO=182;RPL=22;RPP=50.7827;RPPR=398.218;RPR=0;RUN=1;SAF=0;SAP=50.7827;SAR=22;SRF=0;SRP=398.218;SRR=182;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:47,3:47:1738:3:109:0,-4.8835,-146.516 0/0:45:41,4:41:1509:4:145:0,-0.140729,-122.68 0/0:31:30,1:30:1085:1:37:0,-5.6341,-94.259 0/1:42:31,11:31:1150:11:399:-23.6103,0,-91.1602 0/0:21:21,0:21:739:0:0:0,-6.32163,-66.8309 0/1:15:12,3:12:433:3:110:-5.74555,0,-34.7932 dDocent_Contig_11930 19 . G C 1106.62 . AB=0.148936;ABP=153.951;AC=6;AF=0.5;AN=12;AO=21;CIGAR=1X3M;DP=187;DPB=187;DPRA=0;EPP=3.1137;EPPR=109.224;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.634783;PAO=0;PQA=0;PQR=0;PRO=0;QA=749;QR=4454;RO=115;RPL=0;RPP=48.6112;RPPR=252.73;RPR=21;RUN=1;SAF=11;SAP=3.1137;SAR=10;SRF=95;SRP=109.224;SRR=20;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:46:33,13,0:33:1289:13,0:470,0:-28.7899,0,-102.442,-38.7239,-106.356,-144.71 0|1:35:20,7,8:20:777:7,8:278,275:-16.8895,0,-61.7701,-0.620477,-41.572,-62.0512 0|1:47:30,10,7:30:1181:10,7:371,257:-21.3289,0,-94.1647,-9.35141,-76.17,-104.415 0|1:20:11,6,3:11:424:6,3:224,122:-15.0074,0,-32.9936,-8.24449,-24.732,-42.1655 0|1:15:9,5,1:9:339:5,1:179,40:-11.8524,0,-26.2522,-11.2596,-24.4599,-38.7487 0|1:24:12,10,2:12:444:10,2:384,55:-27.9988,0,-33.3921,-27.2834,-32.07,-62.9948 dDocent_Contig_11931 28 . A G 3773.99 . AB=0.679558;ABP=53.698;AC=2;AF=0.166667;AN=12;AO=123;CIGAR=1X1M1X;DP=323;DPB=323;DPRA=2.5493;EPP=270.101;EPPR=437.305;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4831;QR=7766;RO=200;RPL=0;RPP=270.101;RPPR=437.305;RPR=123;RUN=1;SAF=123;SAP=270.101;SAR=0;SRF=200;SRP=437.305;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:9:9,0:9:346:0:0:0,-2.70927,-31.4964 0|0:68:68,0:68:2687:0:0:0,-20.47,-241.976 0|0:43:43,0:43:1660:0:0:0,-12.9443,-149.639 0|0:22:22,0:22:823:0:0:0,-6.62266,-74.3748 0|1:80:26,54:26:1019:54:2107:-165.734,0,-67.9236 0|1:101:32,69:32:1231:69:2724:-214.887,0,-80.6675 dDocent_Contig_11934 8 . G A 62.7186 . AB=0.181818;ABP=22.3561;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=127;DPB=127;DPRA=0.822222;EPP=13.8677;EPPR=267.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.827869;PAO=0;PQA=0;PQR=0;PRO=0;QA=193;QR=4638;RO=122;RPL=0;RPP=13.8677;RPPR=267.93;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=122;SRP=267.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:13:13,0:13:483:0:0:0,-3.91339,-43.8113 0/0:15:14,1:14:539:1:37:0,-0.817621,-45.1572 0/0:35:35,0:35:1330:0:0:0,-10.536,-119.987 0/1:22:18,4:18:683:4:156:-7.79463,0,-55.1805 0/0:22:22,0:22:831:0:0:0,-6.62266,-75.1103 0/0:20:20,0:20:772:0:0:0,-6.0206,-69.808 dDocent_Contig_11935 9 . T C 51.7308 . AB=0.214286;ABP=12.937;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=136;DPB=136;DPRA=1.2;EPP=11.6962;EPPR=289.645;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.75;PAO=0;PQA=0;PQR=0;PRO=0;QA=146;QR=4969;RO=132;RPL=0;RPP=11.6962;RPPR=289.645;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=132;SRP=289.645;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:36,1:36:1379:1:29:0,-8.23845,-121.495 0/0:15:15,0:15:562:0:0:0,-4.51545,-50.9172 0/1:14:11,3:11:407:3:117:-6.69596,0,-32.7603 0/0:34:34,0:34:1252:0:0:0,-10.235,-112.973 0/0:15:15,0:15:570:0:0:0,-4.51545,-51.6404 0/0:21:21,0:21:799:0:0:0,-6.32163,-72.2344 dDocent_Contig_11937 72 . A C 337.672 . AB=0;ABP=0;AC=4;AF=0.333333;AN=12;AO=10;CIGAR=1X;DP=125;DPB=125;DPRA=0.173913;EPP=3.0103;EPPR=252.73;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=359;QR=4269;RO=115;RPL=10;RPP=24.725;RPPR=252.73;RPR=0;RUN=1;SAF=5;SAP=3.0103;SAR=5;SRF=115;SRP=252.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:548:0:0:0,-4.51545,-49.6527 0/0:26:26,0:26:972:0:0:0,-7.82678,-87.7855 0/0:48:48,0:48:1770:0:0:0,-14.4494,-159.556 0/0:26:26,0:26:979:0:0:0,-7.82678,-88.4138 1/1:2:0,2:0:0:2:67:-6.36314,-0.60206,0 1/1:8:0,8:0:0:8:292:-26.6257,-2.40824,0 dDocent_Contig_11938 34 . C T 1088.23 . AB=0.232558;ABP=136.581;AC=5;AF=0.416667;AN=12;AO=50;CIGAR=1X;DP=237;DPB=237;DPRA=1.95455;EPP=111.584;EPPR=406.904;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.68;PAIREDR=0.747312;PAO=0;PQA=0;PQR=0;PRO=0;QA=2012;QR=7309;RO=186;RPL=0;RPP=111.584;RPPR=406.904;RPR=50;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=186;SRP=406.904;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:59:50,9:50:1999:9:356:-14.6389,0,-162.347 0/1:54:33,21:33:1276:21:850:-60.5562,0,-98.8615 0/1:35:29,5:29:1120:5:201:-7.82736,0,-90.4402 0/1:48:39,9:39:1519:9:363:-18.5848,0,-122.508 0/1:19:13,6:13:527:6:242:-16.4374,0,-42.0576 0/0:22:22,0:22:868:0:0:0,-6.62266,-78.4262 dDocent_Contig_11940 54 . G A 121.223 . AB=0.384615;ABP=4.51363;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=116;DPB=116;DPRA=0.631068;EPP=13.8677;EPPR=244.044;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.945946;PAO=0;PQA=0;PQR=0;PRO=0;QA=191;QR=3957;RO=111;RPL=5;RPP=13.8677;RPPR=244.044;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=111;SRP=244.044;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1031:0:0:0,-9.0309,-93.0938 0/0:29:29,0:29:1007:0:0:0,-8.72987,-90.9387 0/0:10:10,0:10:386:0:0:0,-3.0103,-35.0961 0/0:25:25,0:25:939:0:0:0,-7.52575,-84.8233 0/0:9:9,0:9:293:0:0:0,-2.70927,-26.6839 0/1:13:8,5:8:301:5:191:-13.6451,0,-23.5328 dDocent_Contig_11941 106 . N T 282.003 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=9;CIGAR=2X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=58;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=297;QR=0;RO=0;RPL=0;RPP=22.5536;RPPR=0;RPR=9;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:5:0,5:0:0:5:160:-14.7159,-1.50515,0 1|1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1|1:3:0,3:0:0:3:102:-9.50769,-0.90309,0 dDocent_Contig_11942 7 . C T 1781.14 . AB=0.628866;ABP=17.0017;AC=1;AF=0.0833333;AN=12;AO=61;CIGAR=1X;DP=250;DPB=250;DPRA=3.16993;EPP=135.47;EPPR=413.419;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.693122;PAO=0;PQA=0;PQR=0;PRO=0;QA=2318;QR=7254;RO=189;RPL=0;RPP=135.47;RPPR=413.419;RPR=61;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=189;SRP=413.419;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:42:42,0:42:1599:0:0:0,-12.6433,-144.176 0/0:45:45,0:45:1715:0:0:0,-13.5463,-154.61 0/0:20:20,0:20:775:0:0:0,-6.0206,-70.0784 0/0:24:24,0:24:927:0:0:0,-7.22472,-83.747 0/0:22:22,0:22:854:0:0:0,-6.62266,-77.1817 0/1:97:36,61:36:1384:61:2318:-179.637,0,-95.6436 dDocent_Contig_11943 62 . T A 1984.88 . AB=0.34375;ABP=16.582;AC=8;AF=0.666667;AN=12;AO=75;CIGAR=1X;DP=119;DPB=119;DPRA=0;EPP=165.871;EPPR=98.5551;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.986667;PAIREDR=0.954545;PAO=0;PQA=0;PQR=0;PRO=0;QA=2539;QR=1487;RO=44;RPL=75;RPP=165.871;RPPR=98.5551;RPR=0;RUN=1;SAF=75;SAP=165.871;SAR=0;SRF=44;SRP=98.5551;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:10:9,1:9:323:1:35:-0.488329,0,-26.4036 0/1:23:17,6:17:558:6:211:-12.4079,0,-43.6019 0/1:13:6,7:6:213:7:242:-18.2022,0,-15.6023 0/1:18:10,8:10:319:8:289:-20.9384,0,-23.5976 1/1:21:0,21:0:0:21:724:-65.4768,-6.32163,0 1/1:34:2,32:2:74:32:1038:-86.6821,-3.20914,0 dDocent_Contig_11944 14 . A T 83.5461 . AB=0.120482;ABP=106.849;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=549;DPB=549;DPRA=0.551724;EPP=31.2394;EPPR=1166.92;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=57.2481;NS=6;NUMALT=1;ODDS=0;PAIRED=0.846154;PAIREDR=0.679104;PAO=0;PQA=0;PQR=0;PRO=0;QA=518;QR=21426;RO=536;RPL=0;RPP=31.2394;RPPR=1166.92;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=536;SRP=1166.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:104:102,2:102:4076:2:79:0,-23.8095,-347.996 0/0:120:120,0:120:4800:0:0:0,-36.1236,-429.073 0/0:141:141,0:141:5644:0:0:0,-42.4452,-502.624 0/0:101:100,1:100:3986:1:41:0,-26.3095,-351.289 0/1:20:18,2:18:716:2:82:-1.75908,0,-56.8527 0/1:63:55,8:55:2204:8:316:-9.8378,0,-171.916 dDocent_Contig_11945 69 . T G 90.1493 . AB=0.126984;ABP=79.1497;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=144;DPB=144;DPRA=1.55556;EPP=20.3821;EPPR=298.331;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.625;PAIREDR=0.889706;PAO=0;PQA=0;PQR=0;PRO=0;QA=322;QR=5355;RO=136;RPL=8;RPP=20.3821;RPPR=298.331;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=136;SRP=298.331;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:595:0:0:0,-4.81648,-53.885 0/0:22:22,0:22:837:0:0:0,-6.62266,-75.6507 0/1:25:23,2:23:921:2:82:-0.253928,0,-75.6687 0/1:38:32,6:32:1283:6:240:-10.5365,0,-104.299 0/0:27:27,0:27:1075:0:0:0,-8.12781,-97.036 0/0:16:16,0:16:644:0:0:0,-4.81648,-58.2936 dDocent_Contig_11946 25 . A C 10184.6 . AB=0.752887;ABP=243.532;AC=2;AF=0.2;AN=10;AO=326;CIGAR=1X;DP=529;DPB=529;DPRA=6.76562;EPP=710.91;EPPR=443.819;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=12806;QR=7734;RO=203;RPL=0;RPP=710.91;RPPR=443.819;RPR=326;RUN=1;SAF=326;SAP=710.91;SAR=0;SRF=203;SRP=443.819;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 0/0:78:78,0:78:2957:0:0:0,-23.4803,-266.275 0/0:9:9,0:9:343:0:0:0,-2.70927,-31.2237 0/0:9:9,0:9:359:0:0:0,-2.70927,-32.6733 0/1:249:33,216:33:1249:216:8480:-687.829,0,-37.7285 0/1:184:74,110:74:2826:110:4326:-333.933,0,-199.114 dDocent_Contig_11947 67 . G T 233.037 . AB=0.727273;ABP=7.94546;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=40;DPB=40;DPRA=0.758621;EPP=20.3821;EPPR=72.4974;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.96875;PAO=0;PQA=0;PQR=0;PRO=0;QA=319;QR=1281;RO=32;RPL=8;RPP=20.3821;RPPR=72.4974;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=32;SRP=72.4974;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:5:5,0:5:204:0:0:0,-1.50515,-18.744 0/0:5:5,0:5:193:0:0:0,-1.50515,-17.7373 0/1:3:2,1:2:82:1:41:-3.19148,0,-6.87659 0/0:9:9,0:9:357:0:0:0,-2.70927,-32.4909 0/0:10:10,0:10:404:0:0:0,-3.0103,-36.7204 0/1:8:1,7:1:41:7:278:-22.9823,0,-1.68633 dDocent_Contig_11948 37 . G A 255.341 . AB=0.220588;ABP=49.1222;AC=4;AF=0.333333;AN=12;AO=15;CIGAR=1X;DP=93;DPB=93;DPRA=1.36;EPP=6.62942;EPPR=172.385;GTI=0;LEN=1;MEANALT=1;MQM=58.3333;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.533333;PAIREDR=0.769231;PAO=0;PQA=0;PQR=0;PRO=0;QA=566;QR=3047;RO=78;RPL=0;RPP=35.5824;RPPR=172.385;RPR=15;RUN=1;SAF=5;SAP=6.62942;SAR=10;SRF=78;SRP=172.385;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:13:11,2:11:386:2:53:-1.11452,0,-31.1431 0/1:30:24,6:24:955:6:237:-12.6704,0,-77.2173 0/1:11:7,4:7:277:4:154:-10.9181,0,-21.9868 0/1:14:11,3:11:444:3:122:-7.15807,0,-36.1014 0/0:12:12,0:12:469:0:0:0,-3.61236,-42.5509 0/0:13:13,0:13:516:0:0:0,-3.91339,-46.7835 dDocent_Contig_11949 7 . C T 42.9303 . AB=0.1875;ABP=16.582;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=197;DPB=197;DPRA=0.97;EPP=13.8677;EPPR=419.933;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=192;QR=7359;RO=192;RPL=0;RPP=13.8677;RPPR=419.933;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=192;SRP=419.933;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:722:0:0:0,-5.71957,-65.3103 0/0:62:61,1:61:2346:1:39:0,-14.7673,-207.455 0/0:40:40,0:40:1552:0:0:0,-12.0412,-139.949 0/0:41:41,0:41:1553:0:0:0,-12.3422,-140.042 0/1:16:13,3:13:505:3:114:-5.81587,0,-40.9826 0/0:19:18,1:18:681:1:39:0,-1.82301,-57.724 dDocent_Contig_11951 41 . T C 72.3248 . AB=0;ABP=0;AC=2;AF=0.2;AN=10;AO=6;CIGAR=1X;DP=157;DPB=157;DPRA=0.658228;EPP=16.0391;EPPR=330.903;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=229;QR=5817;RO=151;RPL=0;RPP=16.0391;RPPR=330.903;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=151;SRP=330.903;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:69:69,0:69:2667:0:0:0,-20.7711,-240.197 0/0:21:20,1:20:774:1:40:0,-2.32595,-65.9886 0/0:55:52,3:52:2000:3:117:0,-5.64674,-169.307 0/0:10:10,0:10:376:0:0:0,-3.0103,-34.1838 1/1:2:0,2:0:0:2:72:-6.83432,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_11952 1 . N G 123.934 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=8.80089;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=26.6667;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0.333333;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=230;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=5;SAP=8.80089;SAR=1;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:36:-2.6486,-0.30103,0 1/1:4:0,4:0:0:4:153:-5.17122,-1.20412,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11953 9 . C T 7382.92 . AB=0.444079;ABP=11.2676;AC=8;AF=0.666667;AN=12;AO=240;CIGAR=1X1M1X;DP=409;DPB=409;DPRA=0;EPP=524.164;EPPR=367.818;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9284;QR=6567;RO=168;RPL=0;RPP=524.164;RPPR=367.818;RPR=240;RUN=1;SAF=240;SAP=524.164;SAR=0;SRF=168;SRP=367.818;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:44:25,19:25:980:19:747:-54.3114,0,-75.2614 0|1:60:35,25:35:1358:25:966:-69.1856,0,-104.429 0|1:80:40,40:40:1575:40:1548:-115.496,0,-117.921 0|1:120:68,51:68:2654:51:1950:-139.503,0,-202.785 1|1:49:0,49:0:0:49:1888:-170.158,-14.7505,0 1|1:56:0,56:0:0:56:2185:-196.859,-16.8577,0 dDocent_Contig_11954 127 . T C 195.066 . AB=0.106383;ABP=66.2602;AC=5;AF=0.416667;AN=12;AO=11;CIGAR=1X1M1X;DP=145;DPB=145;DPRA=0.669355;EPP=26.8965;EPPR=293.988;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=413;QR=4811;RO=134;RPL=0;RPP=26.8965;RPPR=293.988;RPR=11;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=293.988;SRR=134;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:31:30,1:30:1065:1:38:0,-5.53466,-92.3565 0|1:47:42,5:42:1527:5:182:-2.58279,0,-123.571 0|0:29:29,0:29:1017:0:0:0,-8.72987,-91.8359 0|0:33:33,0:33:1202:0:0:0,-9.93399,-108.486 1|1:3:0,3:0:0:3:116:-10.8177,-0.90309,0 1|1:2:0,2:0:0:2:77:-7.30914,-0.60206,0 dDocent_Contig_11955 187 . C G 60.8319 . AB=0.153846;ABP=16.5402;AC=3;AF=0.3;AN=10;AO=3;CIGAR=1X;DP=51;DPB=51;DPRA=0.567568;EPP=9.52472;EPPR=107.241;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=117;QR=1909;RO=48;RPL=3;RPP=9.52472;RPPR=107.241;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=107.241;SRR=48;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:13:11,2:11:442:2:79:-3.58424,0,-36.2224 0/0:7:7,0:7:276:0:0:0,-2.10721,-25.2088 0/0:17:17,0:17:683:0:0:0,-5.11751,-61.8008 0/0:13:13,0:13:508:0:0:0,-3.91339,-46.0634 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:38:-3.79727,-0.30103,0 dDocent_Contig_11956 9 . C T 6135.32 . AB=0.48731;ABP=3.28587;AC=2;AF=0.166667;AN=12;AO=96;CIGAR=1X2M1X;DP=411;DPB=411;DPRA=0;EPP=211.472;EPPR=374.332;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3688;QR=6663;RO=171;RPL=0;RPP=211.472;RPPR=374.332;RPR=96;RUN=1;SAF=96;SAP=211.472;SAR=0;SRF=171;SRP=374.332;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:100:30,67,0,3:30:1165:67,0,3:2589,0,105:-203.645,0,-75.5856,-212.676,-95.7546,-308.396,-204.14,-87.221,-299.86,-298.957 0|0:139:83,0,0,55:83:3237:0,0,55:0,0,2197:-155.968,-180.953,-447.019,-180.953,-447.019,-447.019,0,-266.071,-266.071,-249.514 0|1:97:43,29,0,25:43:1669:29,0,25:1099,0,995:-77.1439,0,-128.39,-90.0882,-137.12,-227.214,-8.15772,-55.1945,-145.289,-137.763 0|0:23:12,0,0,11:12:472:0,0,11:0,0,444:-33.3919,-37.0043,-75.8258,-37.0043,-75.8258,-75.8258,0,-39.2198,-39.2198,-35.9085 0|0:41:0,0,32,8:0:0:0,32,8:0,1251,321:-129.293,-129.293,-129.293,-26.4584,-26.4584,-16.8254,-102.843,-102.843,0,-100.435 0|0:11:3,0,8,0:3:120:0,8,0:0,314,0:-25.3124,-26.2155,-36.1027,0,-10.2848,-7.87657,-26.2155,-36.1027,-10.2848,-36.1027 dDocent_Contig_11957 148 . T G 332.852 . AB=0.326923;ABP=16.5402;AC=4;AF=0.333333;AN=12;AO=17;CIGAR=1X;DP=83;DPB=83;DPRA=0.83871;EPP=39.9253;EPPR=146.327;GTI=0;LEN=1;MEANALT=1;MQM=46.6471;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.941176;PAIREDR=0.969697;PAO=0;PQA=0;PQR=0;PRO=0;QA=644;QR=2402;RO=66;RPL=0;RPP=39.9253;RPPR=146.327;RPR=17;RUN=1;SAF=0;SAP=39.9253;SAR=17;SRF=0;SRP=146.327;SRR=66;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:9:3,6:3:111:6:234:-18.5131,0,-7.6443 0/1:7:4,3:4:144:3:103:-7.44448,0,-11.2041 0/1:20:16,4:16:586:4:151:-5.08905,0,-47.0526 0/1:16:12,4:12:408:4:156:-9.46039,0,-32.2237 0/0:17:17,0:17:633:0:0:0,-5.11751,-57.3012 0/0:14:14,0:14:520:0:0:0,-4.21442,-47.1366 dDocent_Contig_11958 26 . A G 159.388 . AB=0.142857;ABP=103.829;AC=4;AF=0.333333;AN=12;AO=14;CIGAR=1X;DP=140;DPB=140;DPRA=0.876923;EPP=33.4109;EPPR=276.616;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.428571;PAIREDR=0.698413;PAO=0;PQA=0;PQR=0;PRO=0;QA=521;QR=4878;RO=126;RPL=0;RPP=33.4109;RPPR=276.616;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=126;SRP=276.616;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:13:12,1:12:475:1:40:-0.0822893,0,-39.1883 0/1:43:34,9:34:1305:9:334:-17.4588,0,-104.769 0/1:11:10,1:10:383:1:34:-0.0875811,0,-31.5108 0/1:24:22,2:22:857:2:78:-0.178581,0,-70.2163 0/0:23:22,1:22:844:1:35:0,-3.42506,-72.7671 0/0:26:26,0:26:1014:0:0:0,-7.82678,-91.5615 dDocent_Contig_11960 15 . C T 147.073 . AB=0.18;ABP=47.4821;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=128;DPB=128;DPRA=7.5;EPP=26.8965;EPPR=257.073;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=427;QR=4610;RO=117;RPL=0;RPP=26.8965;RPPR=257.073;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=117;SRP=257.073;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:5:5,0:5:196:0:0:0,-1.50515,-18.0122 0/1:17:13,4:13:504:4:162:-9.84945,0,-40.5828 0/0:3:3,0:3:122:0:0:0,-0.90309,-11.3725 0/0:15:14,1:14:564:1:28:0,-1.71572,-48.3024 0/0:55:54,1:54:2157:1:41:0,-12.4621,-190.209 0/1:33:28,5:28:1067:5:196:-8.07962,0,-86.3723 dDocent_Contig_11961 9 . C T 172.142 . AB=0.1625;ABP=82.1605;AC=1;AF=0.0833333;AN=12;AO=21;CIGAR=1X;DP=343;DPB=343;DPRA=1.72727;EPP=48.6112;EPPR=700.053;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=764;QR=12183;RO=321;RPL=0;RPP=48.6112;RPPR=700.053;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=321;SRP=700.053;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:52:52,0:52:1982:0:0:0,-15.6536,-178.619 0/0:41:40,1:40:1533:1:37:0,-8.6444,-134.545 0/0:25:25,0:25:952:0:0:0,-7.52575,-85.9922 0/0:31:30,1:30:1142:1:39:0,-5.43537,-99.1839 0/1:80:67,13:67:2524:13:472:-18.7371,0,-203.283 0/0:114:107,6:107:4050:6:216:0,-14.5966,-344.805 dDocent_Contig_11962 31 . T C 518.358 . AB=0.09375;ABP=94.755;AC=5;AF=0.5;AN=10;AO=6;CIGAR=1X4M;DP=81;DPB=81;DPRA=2.5098;EPP=16.0391;EPPR=124.613;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=5;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=233;QR=2195;RO=56;RPL=0;RPP=16.0391;RPPR=124.613;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=56;SRP=124.613;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:19:17,0,2:17:673:0,2:0,76:-1.49397,-6.61148,-62.0174,0,-55.7873,-55.1852 1|1:7:0,7,0:0:0:7,0:267,0:-24.3896,-2.10721,0,-24.3896,-2.10721,-24.3896 0|1:16:9,6,1:9:343:6,1:242,41:-17.2336,0,-26.303,-16.5578,-24.7223,-44.3785 0|1:29:20,6,3:20:788:6,3:237,116:-13.4874,0,-63.0299,-9.98461,-55.3109,-73.9104 .:.:.:.:.:.:.:. 0|0:10:10,0,0:10:391:0,0:0,0:0,-3.0103,-35.548,-3.0103,-35.548,-35.548 dDocent_Contig_11963 7 . C T 847.041 . AB=0.3;ABP=6.48466;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X1M1X;DP=109;DPB=109;DPRA=0.454545;EPP=9.52472;EPPR=152.842;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.898551;PAO=0;PQA=0;PQR=0;PRO=0;QA=112;QR=2625;RO=69;RPL=0;RPP=9.52472;RPPR=152.842;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=69;SRP=152.842;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:22:21,0,1:21:800:0,1:0,35:0,-6.32163,-71.9743,-3.12403,-69.128,-68.8269 0|0:21:16,0,5:16:607:0,5:0,172:-9.49611,-14.3126,-64.1107,0,-50.1503,-48.6452 0|0:18:7,0,11:7:262:0,11:0,392:-30.1981,-32.3053,-53.7685,0,-21.8303,-18.519 0|0:25:14,0,11:14:531:0,11:0,359:-25.0972,-29.3116,-72.8812,0,-43.919,-40.6077 0|1:10:6,3,1:6:231:3,1:112,30:-7.41898,0,-18.1366,-6.84486,-16.6532,-25.5186 0|0:13:5,0,8:5:194:0,8:0,281:-21.7155,-23.2207,-39.1748,0,-16.3277,-13.9195 dDocent_Contig_11964 13 . G C 29009.1 . AB=0.355075;ABP=551.219;AC=6;AF=0.5;AN=12;AO=1067;CIGAR=1X;DP=3005;DPB=3005;DPRA=0;EPP=2319.97;EPPR=4200.47;GTI=0;LEN=1;MEANALT=1.66667;MQM=59.9944;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.996251;PAIREDR=0.996896;PAO=0;PQA=0;PQR=0;PRO=0;QA=42423;QR=76742;RO=1933;RPL=0;RPP=2319.97;RPPR=4200.47;RPR=1067;RUN=1;SAF=1067;SAP=2319.97;SAR=0;SRF=1933;SRP=4200.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:426:238,186:238:9387:186:7397:-537.436,0,-716.381 0/1:553:322,231:322:12708:231:9179:-659.105,0,-976.379 0/1:233:123,110:123:4899:110:4391:-325,0,-370.662 0/1:534:262,271:262:10365:271:10752:-806.309,0,-771.501 0/1:642:508,132:508:20224:132:5280:-282.003,0,-1625.43 0/1:617:480,137:480:19159:137:5424:-302.277,0,-1537 dDocent_Contig_11965 98 . N C 208.148 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0.857143;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=222;QR=0;RO=0;RPL=7;RPP=18.2106;RPPR=0;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:20:-1.99996,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:6:0,6:0:0:6:202:-18.5105,-1.80618,0 dDocent_Contig_11966 37 . G A 2941.42 . AB=0.452586;ABP=7.54044;AC=6;AF=0.5;AN=12;AO=105;CIGAR=1X;DP=232;DPB=232;DPRA=0;EPP=231.015;EPPR=278.787;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.780952;PAIREDR=0.724409;PAO=0;PQA=0;PQR=0;PRO=0;QA=4147;QR=5023;RO=127;RPL=0;RPP=231.015;RPPR=278.787;RPR=105;RUN=1;SAF=105;SAP=231.015;SAR=0;SRF=127;SRP=278.787;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:14,21:14:535:21:834:-64.8399,0,-37.9499 0/1:45:11,34:11:439:34:1326:-106.058,0,-26.3164 0/1:17:10,7:10:404:7:274:-19.9096,0,-31.6025 0/1:45:18,27:18:704:27:1073:-83.3147,0,-50.1387 0/1:44:39,5:39:1545:5:202:-5.31617,0,-126.044 0/1:46:35,11:35:1396:11:438:-25.9249,0,-112.048 dDocent_Contig_11967 72 . G A 3447.44 . AB=0.395349;ABP=43.9148;AC=6;AF=0.5;AN=12;AO=170;CIGAR=1X;DP=430;DPB=430;DPRA=0;EPP=372.161;EPPR=565.422;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.994118;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5374;QR=8052;RO=259;RPL=170;RPP=372.161;RPPR=565.422;RPR=0;RUN=1;SAF=170;SAP=372.161;SAR=0;SRF=259;SRP=565.422;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:6,17:6:167:17:532:-41.2577,0,-8.38196 0/1:24:19,5:19:594:5:161:-7.58386,0,-46.5369 0/1:22:11,11:11:349:11:363:-26.3679,0,-25.0968 0/1:91:16,75:16:506:75:2353:-184.643,0,-18.451 0/1:148:117,30:117:3619:30:969:-42.9106,0,-281.35 0/1:122:90,32:90:2817:32:996:-53.2034,0,-217.062 dDocent_Contig_11968 21 . T A 44.7809 . AB=0.1875;ABP=16.582;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1M1D1X;DP=96;DPB=94.3333;DPRA=0.745455;EPP=13.8677;EPPR=200.614;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.6;PAIREDR=0.89011;PAO=0;PQA=0;PQR=0;PRO=0;QA=189;QR=3575;RO=91;RPL=0;RPP=13.8677;RPPR=200.614;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=91;SRP=200.614;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:4:4,0:4:158:0:0:0,-1.20412,-14.6003 0|0:14:13,1:13:493:1:41:0,-0.119853,-40.6088 0|0:11:10,1:10:398:1:32:0,-0.112017,-32.9806 0|1:16:13,3:13:497:3:116:-5.9998,0,-40.2517 0|0:32:32,0:32:1265:0:0:0,-9.63296,-114.128 0|0:19:19,0:19:764:0:0:0,-5.71957,-69.0828 dDocent_Contig_11969 66 . G C 172.774 . AB=0.142857;ABP=119.339;AC=2;AF=0.166667;AN=12;AO=33;CIGAR=1X;DP=419;DPB=419;DPRA=2.68966;EPP=74.6689;EPPR=836.856;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.454545;PAIREDR=0.479167;PAO=0;PQA=0;PQR=0;PRO=0;QA=1246;QR=13924;RO=384;RPL=26;RPP=26.7649;RPPR=81.7488;RPR=7;RUN=1;SAF=26;SAP=26.7649;SAR=7;SRF=251;SRP=81.7488;SRR=133;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:71:68,3:68:2473:3:113:0,-10.8371,-212.259 0/0:149:134,13:134:4816:13:483:0,-0.80398,-389.742 0/0:65:63,2:63:2344:2:79:0,-12.0693,-203.675 0/1:74:64,10:64:2307:10:380:-12.2748,0,-185.576 0/0:29:29,0:29:1066:0:0:0,-8.72987,-96.238 0/1:31:26,5:26:918:5:191:-8.22439,0,-73.5876 dDocent_Contig_11971 24 . A C 82.5004 . AB=0.263158;ABP=12.2676;AC=3;AF=0.25;AN=12;AO=5;CIGAR=1X;DP=85;DPB=85;DPRA=0.287879;EPP=13.8677;EPPR=176.728;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=200;QR=3187;RO=80;RPL=0;RPP=13.8677;RPPR=176.728;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=80;SRP=176.728;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:10:8,2:8:319:2:78:-4.39248,0,-26.0666 0/1:2:1,1:1:37:1:41:-3.49251,0,-3.09577 0/0:52:52,0:52:2068:0:0:0,-15.6536,-186.303 0/0:6:6,0:6:245:0:0:0,-1.80618,-22.4295 0/0:8:8,0:8:318:0:0:0,-2.40824,-28.9859 0/1:7:5,2:5:200:2:81:-5.57852,0,-16.2718 dDocent_Contig_11972 39 . C A 36.2807 . AB=0.125;ABP=42.0968;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=259;DPB=259;DPRA=0.704846;EPP=11.6962;EPPR=556.736;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.733333;PAO=0;PQA=0;PQR=0;PRO=0;QA=160;QR=9967;RO=255;RPL=0;RPP=11.6962;RPPR=556.736;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=255;SRP=556.736;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:44,0:44:1691:0:0:0,-13.2453,-152.418 0/0:66:66,0:66:2582:0:0:0,-19.868,-232.516 0/0:40:40,0:40:1601:0:0:0,-12.0412,-144.322 0/0:36:36,0:36:1399:0:0:0,-10.8371,-126.169 0/1:32:28,4:28:1108:4:160:-5.15084,0,-90.3727 0/0:41:41,0:41:1586:0:0:0,-12.3422,-142.968 dDocent_Contig_11974 20 . T A 11421.9 . AB=0.781145;ABP=206.917;AC=8;AF=0.666667;AN=12;AO=345;CIGAR=1X;DP=410;DPB=410;DPRA=0;EPP=752.168;EPPR=144.156;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.93913;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13738;QR=2558;RO=65;RPL=0;RPP=752.168;RPPR=144.156;RPR=345;RUN=1;SAF=345;SAP=752.168;SAR=0;SRF=65;SRP=144.156;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:61:39,22:39:1529:22:875:-60.6909,0,-119.487 0/1:81:10,71:10:391:71:2838:-231.149,0,-11.1594 0/1:94:8,86:8:317:86:3431:-280.534,0,-0.598692 0/1:61:8,53:8:321:53:2122:-172.796,0,-10.8951 1/1:46:0,46:0:0:46:1836:-165.453,-13.8474,0 1/1:67:0,67:0:0:67:2636:-237.383,-20.169,0 dDocent_Contig_11975 98 . N T 134.074 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=138;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_11976 108 . G T 231.196 . AB=0.189474;ABP=82.5776;AC=3;AF=0.25;AN=12;AO=19;CIGAR=1X3M1X;DP=435;DPB=435;DPRA=0.217822;EPP=44.2683;EPPR=888.971;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.736842;PAIREDR=0.960784;PAO=0;PQA=0;PQR=0;PRO=0;QA=649;QR=13569;RO=408;RPL=0;RPP=44.2683;RPPR=888.971;RPR=19;RUN=1;SAF=0;SAP=44.2683;SAR=19;SRF=0;SRP=888.971;SRR=408;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:17:12,5:12:379:5:170:-10.5173,0,-29.2983 0|1:44:39,5:39:1291:5:174:-2.75663,0,-103.241 0|1:34:24,8:24:798:8:272:-15.055,0,-62.406 0|0:37:36,1:36:1196:1:33:0,-7.83897,-104.639 0|0:163:162,0:162:5437:0:0:0,-48.7669,-489.438 0|0:140:135,0:135:4468:0:0:0,-40.639,-402.028 dDocent_Contig_11977 17 . C G 224.18 . AB=0.175676;ABP=70.6194;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=197;DPB=197;DPRA=1.20325;EPP=31.2394;EPPR=402.561;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.846154;PAIREDR=0.701087;PAO=0;PQA=0;PQR=0;PRO=0;QA=524;QR=7350;RO=184;RPL=0;RPP=31.2394;RPPR=402.561;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=184;SRP=402.561;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:47:37,10:37:1485:10:402:-22.3911,0,-119.746 0/1:27:24,3:24:963:3:122:-3.24468,0,-78.8425 0/0:5:5,0:5:195:0:0:0,-1.50515,-17.9195 0/0:29:29,0:29:1173:0:0:0,-8.72987,-105.846 0/0:39:39,0:39:1537:0:0:0,-11.7402,-138.566 0/0:50:50,0:50:1997:0:0:0,-15.0515,-179.923 dDocent_Contig_11978 7 . C T 2196.06 . AB=0.293578;ABP=124.035;AC=6;AF=0.5;AN=12;AO=96;CIGAR=1X;DP=327;DPB=327;DPRA=0;EPP=211.472;EPPR=504.62;GTI=0;LEN=1;MEANALT=1;MQM=59.25;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.583333;PAIREDR=0.580087;PAO=0;PQA=0;PQR=0;PRO=0;QA=3643;QR=8911;RO=231;RPL=0;RPP=211.472;RPPR=504.62;RPR=96;RUN=1;SAF=96;SAP=211.472;SAR=0;SRF=231;SRP=504.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:43:27,16:27:1037:16:616:-42.8352,0,-80.6913 0/1:67:56,11:56:2166:11:422:-18.1644,0,-174.994 0/1:44:37,7:37:1416:7:262:-10.691,0,-114.472 0/1:50:38,12:38:1472:12:456:-26.3364,0,-117.704 0/1:62:29,33:29:1110:33:1256:-94.0425,0,-81.5344 0/1:61:44,17:44:1710:17:631:-38.7584,0,-135.793 dDocent_Contig_11979 8 . G A 47.9299 . AB=0.12;ABP=65.7224;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=429;DPB=429;DPRA=1.17578;EPP=39.9253;EPPR=897.657;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=652;QR=15713;RO=412;RPL=0;RPP=39.9253;RPPR=897.657;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=412;SRP=897.657;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:50:44,6:44:1664:6:230:-6.01483,0,-134.968 0/0:46:44,2:44:1660:2:76:0,-6.63271,-142.445 0/0:144:138,6:138:5269:6:229:0,-22.373,-453.234 0/0:55:55,0:55:2112:0:0:0,-16.5566,-190.311 0/0:61:58,3:58:2213:3:117:0,-7.45245,-188.478 0/0:73:73,0:73:2795:0:0:0,-21.9752,-251.731 dDocent_Contig_11980 63 . T C 3608.47 . AB=0.539474;ABP=6.09608;AC=4;AF=0.333333;AN=12;AO=125;CIGAR=1X;DP=316;DPB=316;DPRA=1.20444;EPP=274.444;EPPR=409.076;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4909;QR=7501;RO=187;RPL=125;RPP=274.444;RPPR=409.076;RPR=0;RUN=1;SAF=125;SAP=274.444;SAR=0;SRF=187;SRP=409.076;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:14,5:14:567:5:177:-10.5508,0,-45.6527 0/1:76:51,25:51:2036:25:972:-64.899,0,-160.551 0/0:43:41,2:41:1652:2:78:0,-5.54099,-141.5 0/0:45:45,0:45:1798:0:0:0,-13.5463,-162.035 0/1:83:8,71:8:326:71:2801:-228.071,0,-5.55297 0/1:50:28,22:28:1122:22:881:-64.5477,0,-86.2129 dDocent_Contig_11981 33 . A G 3245.2 . AB=0.107143;ABP=40.5458;AC=0;AF=0;AN=12;AO=3;CIGAR=1X3M1X;DP=179;DPB=179;DPRA=0;EPP=9.52472;EPPR=148.499;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.985075;PAO=0;PQA=0;PQR=0;PRO=0;QA=113;QR=2594;RO=67;RPL=0;RPP=9.52472;RPPR=148.499;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=67;SRP=148.499;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:34:18,0,16:18:702:0,16:0,613:-45.2594,-50.6779,-108.385,0,-58.0932,-53.2767 0|0:28:7,3,18:7:279:3,18:113,717:-56.9496,-49.8017,-71.8751,0,-13.74,-17.5731 0|0:32:16,0,15:16:614:0,15:0,606:-45.4365,-50.253,-100.647,0,-50.6705,-46.1551 0|0:55:13,0,42:13:516:0,42:0,1678:-134.685,-138.598,-181.077,0,-42.8754,-30.2321 0|0:10:5,0,5:5:173:0,5:0,203:-15.6339,-17.1391,-31.1611,0,-14.3975,-12.8924 0|0:20:8,0,12:8:310:0,12:0,483:-37.7773,-40.1856,-65.6434,0,-25.8509,-22.2385 dDocent_Contig_11982 69 . T A 265.737 . AB=0.225;ABP=55.5599;AC=4;AF=0.333333;AN=12;AO=18;CIGAR=1X;DP=97;DPB=97;DPRA=2.35294;EPP=42.0968;EPPR=174.557;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=628;QR=2616;RO=79;RPL=18;RPP=42.0968;RPPR=174.557;RPR=0;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=79;SRP=174.557;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:9:7,2:7:242:2:61:-3.08426,0,-19.4083 0/1:7:4,3:4:128:3:106:-7.78189,0,-9.72853 0/1:52:42,10:42:1387:10:350:-16.1819,0,-109.453 0/1:12:9,3:9:310:3:111:-6.74156,0,-24.6216 0/0:11:11,0:11:347:0:0:0,-3.31133,-31.5368 0/0:6:6,0:6:202:0:0:0,-1.80618,-18.51 dDocent_Contig_11983 35 . A G 251.777 . AB=0.255814;ABP=25.2805;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=217;DPB=217;DPRA=0.838983;EPP=33.4109;EPPR=443.819;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.965517;PAO=0;PQA=0;PQR=0;PRO=0;QA=564;QR=8087;RO=203;RPL=0;RPP=33.4109;RPPR=443.819;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=203;SRP=443.819;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:51:51,0:51:2036:0:0:0,-15.3525,-183.429 0/1:10:9,1:9:364:1:39:-0.886264,0,-30.1141 0/1:33:23,10:23:920:10:403:-26.695,0,-73.1706 0/0:56:53,3:53:2089:3:122:0,-5.48519,-176.83 0/0:54:54,0:54:2156:0:0:0,-16.2556,-194.216 0/0:13:13,0:13:522:0:0:0,-3.91339,-47.3268 dDocent_Contig_11984 60 . A G 1233.7 . AB=0.449438;ABP=4.98658;AC=4;AF=0.333333;AN=12;AO=43;CIGAR=1X2M1X;DP=128;DPB=128;DPRA=2.55556;EPP=96.3836;EPPR=185.414;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1694;QR=3343;RO=84;RPL=43;RPP=96.3836;RPPR=185.414;RPR=0;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=84;SRP=185.414;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:3:3,0:3:119:0:0:0,-0.90309,-11.0954 1|1:3:0,3:0:0:3:120:-11.1873,-0.90309,0 0|0:17:17,0:17:685:0:0:0,-5.11751,-61.9804 0|0:16:16,0:16:642:0:0:0,-4.81648,-58.1151 0|1:30:23,7:23:921:7:278:-16.3602,0,-74.1673 0|1:59:25,33:25:976:33:1296:-99.0439,0,-70.2697 dDocent_Contig_11985 11 . T C 38.5276 . AB=0.148148;ABP=32.0437;AC=2;AF=0.166667;AN=12;AO=4;CIGAR=1X;DP=86;DPB=86;DPRA=0.915254;EPP=11.6962;EPPR=181.071;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=160;QR=3281;RO=82;RPL=0;RPP=11.6962;RPPR=181.071;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=82;SRP=181.071;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:399:0:0:0,-3.0103,-36.2682 0/1:17:15,2:15:609:2:81:-2.56822,0,-50.0304 0/0:18:18,0:18:733:0:0:0,-5.41854,-66.2937 0/1:10:8,2:8:317:2:79:-4.48694,0,-25.8858 0/0:26:26,0:26:1035:0:0:0,-7.82678,-93.4426 0/0:5:5,0:5:188:0:0:0,-1.50515,-17.2804 dDocent_Contig_11986 18 . A G 56.258 . AB=0.131579;ABP=47.8112;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=420;DPB=420;DPRA=0.818182;EPP=29.068;EPPR=888.971;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.835784;PAO=0;PQA=0;PQR=0;PRO=0;QA=483;QR=16258;RO=408;RPL=0;RPP=29.068;RPPR=888.971;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=408;SRP=888.971;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:33,5:33:1321:5:199:-6.84761,0,-107.712 0/0:47:47,0:47:1862:0:0:0,-14.1484,-167.788 0/0:66:61,5:61:2423:5:203:0,-1.21492,-199.564 0/0:85:83,2:83:3314:2:81:0,-17.9018,-290.628 0/0:95:95,0:95:3810:0:0:0,-28.5978,-342.901 0/0:89:89,0:89:3528:0:0:0,-26.7917,-317.559 dDocent_Contig_11987 50 . C T 43.8974 . AB=0.106061;ABP=91.9749;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=410;DPB=410;DPRA=0.959302;EPP=18.2106;EPPR=878.114;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.980149;PAO=0;PQA=0;PQR=0;PRO=0;QA=279;QR=15846;RO=403;RPL=7;RPP=18.2106;RPPR=878.114;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=403;SRP=878.114;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:66:59,7:59:2330:7:279:-5.61157,0,-190.001 0/0:81:81,0:81:3178:0:0:0,-24.3834,-286.085 0/0:43:43,0:43:1721:0:0:0,-12.9443,-155.109 0/0:54:54,0:54:2136:0:0:0,-16.2556,-192.422 0/0:87:87,0:87:3409:0:0:0,-26.1896,-306.878 0/0:79:79,0:79:3072:0:0:0,-23.7814,-276.576 dDocent_Contig_11988 11 . T C 3272.03 . AB=0.487069;ABP=3.34725;AC=6;AF=0.5;AN=12;AO=113;CIGAR=1X;DP=232;DPB=232;DPRA=0;EPP=248.387;EPPR=261.416;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.460177;PAIREDR=0.487395;PAO=0;PQA=0;PQR=0;PRO=0;QA=4515;QR=4761;RO=119;RPL=0;RPP=248.387;RPPR=261.416;RPR=113;RUN=1;SAF=113;SAP=248.387;SAR=0;SRF=119;SRP=261.416;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:20,14:20:810:14:563:-40.7775,0,-62.9804 0/1:56:34,22:34:1367:22:884:-63.008,0,-106.426 0/1:33:18,15:18:732:15:599:-44.3095,0,-56.27 0/1:62:19,43:19:746:43:1702:-134.729,0,-48.7943 0/1:18:10,8:10:388:8:317:-23.4747,0,-29.8523 0/1:29:18,11:18:718:11:450:-32.1259,0,-56.2141 dDocent_Contig_11990 14 . T C 1824.34 . AB=0.198425;ABP=504.634;AC=6;AF=0.5;AN=12;AO=126;CIGAR=1X;DP=635;DPB=635;DPRA=0;EPP=276.616;EPPR=1108.29;GTI=0;LEN=1;MEANALT=1;MQM=45.881;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.888889;PAIREDR=0.931238;PAO=0;PQA=0;PQR=0;PRO=0;QA=5037;QR=20208;RO=509;RPL=0;RPP=276.616;RPPR=1108.29;RPR=126;RUN=1;SAF=126;SAP=276.616;SAR=0;SRF=509;SRP=1108.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:76:55,21:55:2203:21:846:-47.1098,0,-175.565 0/1:112:98,14:98:3861:14:533:-5.59083,0,-313.793 0/1:102:66,36:66:2639:36:1442:-84.1605,0,-206.928 0/1:111:91,20:91:3609:20:799:-13.6766,0,-291.431 0/1:133:110,23:110:4396:23:937:-35.1579,0,-355.544 0/1:101:89,12:89:3500:12:480:-7.95995,0,-284.627 dDocent_Contig_11991 21 . T A 6057.3 . AB=0.0434783;ABP=669.18;AC=0;AF=0;AN=12;AO=16;CIGAR=1X1M1I17M;DP=556;DPB=523.737;DPRA=0;EPP=37.7539;EPPR=454.677;GTI=0;LEN=1;MEANALT=6.25;MQM=60;MQMR=60;NS=6;NUMALT=6;ODDS=1.11022e-16;PAIRED=1;PAIREDR=0.947115;PAO=0;PQA=0;PQR=0;PRO=0;QA=634;QR=8145;RO=208;RPL=0;RPP=37.7539;RPPR=454.677;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=208;SRP=454.677;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:86:19,4,12,15,31,0,1:19:745:4,12,15,31,0,1:163,477,560,1205,0,41:-93.2899,-85.5602,-145.625,-60.8417,-108.662,-118.499,-53.1688,-100.989,-76.271,-109.922,0,-47.8239,-23.105,-15.4329,-51.9418,-99.0095,-146.829,-122.111,-114.438,-61.2737,-160.278,-95.6249,-143.445,-118.727,-111.053,-57.889,-156.894,-156.593 0|0:103:44,8,2,10,27,9,0:44:1734:8,2,10,27,9,0:313,81,401,1051,367,0:-73.1009,-60.6112,-200.861,-79.6667,-196.59,-221.723,-53.3059,-170.229,-189.285,-192.954,0,-116.92,-135.976,-109.615,-134.527,-56.0653,-172.989,-192.045,-165.684,-112.375,-196.015,-86.3462,-203.269,-222.325,-195.965,-142.655,-198.725,-229.004 0|0:93:10,3,0,33,37,0,7:10:390:3,0,33,37,0,7:120,0,1286,1474,0,277:-191.996,-185.121,-216.275,-195.006,-217.178,-227.063,-89.3228,-111.494,-121.379,-111.445,-73.6282,-95.8001,-105.686,0,-94.5477,-195.006,-217.178,-227.063,-121.379,-105.686,-227.063,-172.21,-194.381,-204.267,-98.5831,-82.8889,-204.267,-202.159 0|0:86:30,1,0,8,44,0,3:30:1147:1,0,8,44,0,3:38,0,322,1755,0,121:-135.491,-141.406,-235.203,-144.522,-235.504,-238.62,-117.983,-208.965,-212.081,-209.673,0,-90.9745,-94.0909,-67.5493,-80.8455,-144.522,-235.504,-238.62,-212.081,-94.0909,-238.62,-134.548,-225.529,-228.646,-202.107,-84.1156,-228.646,-227.743 0|0:80:39,0,8,17,8,0,7:39:1541:0,8,17,8,0,7:0,321,678,326,0,276:-44.0956,-55.8358,-182.644,-29.3858,-156.194,-153.786,0,-126.808,-100.358,-121.69,-28.9389,-155.748,-129.298,-99.9115,-153.34,-55.8358,-182.644,-156.194,-126.808,-155.748,-182.644,-33.1307,-159.938,-133.488,-104.102,-133.042,-159.938,-157.831 0|0:108:66,0,10,2,30,0,0:66:2588:0,10,2,30,0,0:0,400,80,1200,0,0:-78.9789,-98.8468,-311.663,-65.8966,-278.713,-275.702,-92.2569,-305.073,-272.122,-304.471,0,-212.815,-179.863,-206.224,-203.784,-98.8468,-311.663,-278.713,-305.073,-212.815,-311.663,-98.8468,-311.663,-278.713,-305.073,-212.815,-311.663,-311.663 dDocent_Contig_11992 15 . C A 311.819 . AB=0.413793;ABP=4.88226;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=105;DPB=105;DPRA=0.763158;EPP=29.068;EPPR=120.713;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.849462;PAO=0;PQA=0;PQR=0;PRO=0;QA=471;QR=3655;RO=93;RPL=0;RPP=29.068;RPPR=204.957;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=82;SRP=120.713;SRR=11;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:608:0:0:0,-4.51545,-55.0577 0/1:10:7,3:7:279:3:120:-8.17701,0,-22.4694 0/0:13:13,0:13:522:0:0:0,-3.91339,-47.3252 0/0:25:25,0:25:914:0:0:0,-7.52575,-82.5496 0/1:19:10,9:10:402:9:351:-26.2267,0,-30.8185 0/0:23:23,0:23:930:0:0:0,-6.92369,-84.0031 dDocent_Contig_11993 20 . T C 337.261 . AB=0.272727;ABP=27.6861;AC=3;AF=0.25;AN=12;AO=15;CIGAR=1X;DP=139;DPB=139;DPRA=0.654762;EPP=35.5824;EPPR=272.273;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.8;PAIREDR=0.83871;PAO=0;PQA=0;PQR=0;PRO=0;QA=604;QR=5001;RO=124;RPL=0;RPP=35.5824;RPPR=272.273;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=124;SRP=272.273;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:491:0:0:0,-3.61236,-44.541 0/0:37:37,0:37:1499:0:0:0,-11.1381,-135.146 0/1:12:10,2:10:408:2:81:-4.07337,0,-33.468 0/0:35:35,0:35:1401:0:0:0,-10.536,-126.343 0/1:16:10,6:10:398:6:239:-17.0683,0,-31.3586 0/1:27:20,7:20:804:7:284:-17.8056,0,-64.55 dDocent_Contig_11994 63 . G A 2056.61 . AB=0.243478;ABP=68.7398;AC=3;AF=0.3;AN=10;AO=57;CIGAR=9M1X8M;DP=155;DPB=151.556;DPRA=3.625;EPP=126.784;EPPR=137.642;GTI=0;LEN=1;MEANALT=2.75;MQM=60;MQMR=60;NS=5;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1893;QR=2000;RO=62;RPL=57;RPP=126.784;RPPR=137.642;RPR=0;RUN=1;SAF=57;SAP=126.784;SAR=0;SRF=62;SRP=137.642;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:15:8,6,1:8:262:6,1:208,7:-14.7338,0,-19.5882,-16.8526,-21.094,-37.7063 0|0:10:9,0,0:9:280:0,0:0,0:0,-2.70927,-25.4211,-2.70927,-25.4211,-25.4211 0|1:47:14,6,25:14:459:6,25:210,877:-67.2012,-54.3335,-89.6094,0,-20.0161,-29.5828 0|0:53:31,19,2:31:999:19,2:659,70:-44.302,0,-74.8933,-47.9369,-74.9153,-127.881 1|1:30:0,0,29:0:0:0,29:0,939:-84.7252,-84.7252,-84.7252,-8.72987,-8.72987,0 .:.:.:.:.:.:.:. dDocent_Contig_11995 7 . C T 54.7003 . AB=0.139535;ABP=51.5402;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=160;DPB=160;DPRA=1.13333;EPP=22.5536;EPPR=330.903;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.555556;PAIREDR=0.860927;PAO=0;PQA=0;PQR=0;PRO=0;QA=349;QR=5790;RO=151;RPL=0;RPP=22.5536;RPPR=330.903;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=151;SRP=330.903;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:918:0:0:0,-7.22472,-82.9359 0/0:43:42,1:42:1584:1:39:0,-9.04772,-138.933 0/1:23:20,3:20:769:3:117:-3.98669,0,-62.6143 0/1:20:17,3:17:660:3:115:-4.70429,0,-53.7166 0/0:24:23,1:23:893:1:39:0,-3.32816,-76.7927 0/0:26:25,1:25:966:1:39:0,-3.93022,-83.3563 dDocent_Contig_11996 34 . A G 2463.73 . AB=0.186047;ABP=39.8243;AC=0;AF=0;AN=12;AO=8;CIGAR=1X1M1X;DP=225;DPB=225;DPRA=0;EPP=20.3821;EPPR=276.616;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=312;QR=4919;RO=126;RPL=0;RPP=20.3821;RPPR=276.616;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=126;SRP=276.616;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:32:15,0,17:15:585:0,17:0,676:-51.5375,-56.0529,-104.132,0,-48.4722,-43.3547 0|0:50:31,0,19:31:1209:0,19:0,743:-52.135,-61.4669,-160.837,0,-99.7605,-94.041 0|0:38:27,0,11:27:1068:0,11:0,424:-27.0668,-35.1946,-123.092,0,-88.2854,-84.9741 0|0:39:28,0,11:28:1076:0,11:0,422:-26.5857,-35.0145,-123.333,0,-88.7019,-85.3906 0|0:43:11,8,24:11:433:8,24:312,942:-74.1585,-51.8251,-85.0358,0,-9.97684,-28.396 0|0:23:14,0,9:14:548:0,9:0,363:-26.1112,-30.3256,-75.3739,0,-45.4465,-42.7372 dDocent_Contig_11997 26 . G A 8241.04 . AB=0.492091;ABP=3.31942;AC=6;AF=0.5;AN=12;AO=280;CIGAR=1X;DP=569;DPB=569;DPRA=0;EPP=611.023;EPPR=630.566;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0;PAIREDR=0.515571;PAO=0;PQA=0;PQR=0;PRO=0;QA=11171;QR=11467;RO=289;RPL=0;RPP=611.023;RPPR=630.566;RPR=280;RUN=1;SAF=280;SAP=611.023;SAR=0;SRF=289;SRP=630.566;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:95:41,54:41:1617:54:2169:-166.784,0,-117.163 0/1:91:33,58:33:1332:58:2319:-181.471,0,-92.7462 0/1:80:43,37:43:1714:37:1483:-109.634,0,-130.403 0/1:121:45,76:45:1769:76:3022:-235.647,0,-123.008 0/1:57:40,17:40:1584:17:670:-43.4651,0,-125.64 0/1:125:87,38:87:3451:38:1508:-98.3257,0,-273.01 dDocent_Contig_11998 49 . G A 299.418 . AB=0.366667;ABP=7.64277;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=80;DPB=80;DPRA=3;EPP=26.8965;EPPR=152.842;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=446;QR=2708;RO=69;RPL=0;RPP=26.8965;RPPR=152.842;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=69;SRP=152.842;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:8:8,0:8:314:0:0:0,-2.40824,-28.623 0/0:16:16,0:16:625:0:0:0,-4.81648,-56.5778 0/0:10:10,0:10:388:0:0:0,-3.0103,-35.2708 0/0:6:6,0:6:243:0:0:0,-1.80618,-22.248 0/1:30:19,11:19:754:11:446:-31.4647,0,-59.1517 0/0:10:10,0:10:384:0:0:0,-3.0103,-34.9134 dDocent_Contig_11999 11 . C A 88.5603 . AB=0.114583;ABP=126.875;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=273;DPB=273;DPRA=0.978261;EPP=31.2394;EPPR=567.593;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992308;PAO=0;PQA=0;PQR=0;PRO=0;QA=526;QR=10469;RO=260;RPL=0;RPP=31.2394;RPPR=567.593;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=260;SRP=567.593;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:29,3:29:1180:3:120:-1.55435,0,-96.8402 0/0:67:67,0:67:2667:0:0:0,-20.169,-240.145 0/0:28:28,0:28:1137:0:0:0,-8.42884,-102.609 0/0:39:37,2:37:1501:2:81:0,-4.05444,-127.641 0/0:43:43,0:43:1730:0:0:0,-12.9443,-155.916 0/1:64:56,8:56:2254:8:325:-10.3537,0,-183.751 dDocent_Contig_12001 19 . T A 330.497 . AB=0.24;ABP=17.6895;AC=4;AF=0.4;AN=10;AO=12;CIGAR=1X;DP=54;DPB=54;DPRA=0.898551;EPP=29.068;EPPR=94.2121;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=475;QR=1702;RO=42;RPL=0;RPP=29.068;RPPR=94.2121;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=42;SRP=94.2121;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:10,2:10:404:2:73:-3.31874,0,-33.1081 0/1:13:9,4:9:365:4:161:-10.9615,0,-29.3011 0/0:9:9,0:9:367:0:0:0,-2.70927,-33.3953 0/0:14:14,0:14:566:0:0:0,-4.21442,-51.281 ./.:.:.:.:.:.:.:. 1/1:6:0,6:0:0:6:241:-22.0663,-1.80618,0 dDocent_Contig_12002 146 . T A 30.5073 . AB=0.121212;ABP=44.1367;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=141;DPB=141;DPRA=1.52778;EPP=11.6962;EPPR=300.502;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=157;QR=5429;RO=137;RPL=0;RPP=11.6962;RPPR=300.502;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=300.502;SRR=137;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:952:0:0:0,-7.52575,-85.9716 0/1:33:29,4:29:1176:4:157:-4.57319,0,-96.18 0/0:44:44,0:44:1723:0:0:0,-13.2453,-155.283 0/0:26:26,0:26:1051:0:0:0,-7.82678,-94.8804 0/0:8:8,0:8:328:0:0:0,-2.40824,-29.8903 0/0:5:5,0:5:199:0:0:0,-1.50515,-18.2874 dDocent_Contig_12003 45 . A C 1288.94 . AB=0.342282;ABP=35.2035;AC=6;AF=0.5;AN=12;AO=51;CIGAR=1X;DP=149;DPB=149;DPRA=0;EPP=113.755;EPPR=190.555;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.705882;PAIREDR=0.489796;PAO=0;PQA=0;PQR=0;PRO=0;QA=2031;QR=3930;RO=98;RPL=0;RPP=113.755;RPPR=215.815;RPR=51;RUN=1;SAF=51;SAP=113.755;SAR=0;SRF=95;SRP=190.555;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:24,12:24:973:12:459:-30.8021,0,-77.0304 0/1:39:21,18:21:829:18:721:-53.4749,0,-63.1838 0/1:28:15,13:15:605:13:525:-39.165,0,-46.3595 0/1:31:27,4:27:1085:4:164:-5.81797,0,-88.6042 0/1:10:8,2:8:318:2:80:-4.58128,0,-25.9737 0/1:5:3,2:3:120:2:82:-6.27453,0,-9.68216 dDocent_Contig_12004 10 . T C 3245.47 . AB=0.3625;ABP=42.4225;AC=7;AF=0.583333;AN=12;AO=113;CIGAR=1X;DP=382;DPB=382;DPRA=0;EPP=248.387;EPPR=587.136;GTI=0;LEN=1;MEANALT=1;MQM=59.0442;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.955752;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4553;QR=10714;RO=269;RPL=0;RPP=248.387;RPPR=587.136;RPR=113;RUN=1;SAF=113;SAP=248.387;SAR=0;SRF=269;SRP=587.136;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:56:36,20:36:1439:20:810:-56.3572,0,-112.904 0/1:94:43,51:43:1711:51:2047:-156.113,0,-125.914 0/1:90:74,16:74:2956:16:646:-29.7955,0,-239.028 0/0:116:115,1:115:4567:1:40:0,-30.9238,-406.955 1/1:11:0,11:0:0:11:443:-40.2255,-3.31133,0 1/1:15:1,14:1:41:14:567:-47.2781,-0.420883,0 dDocent_Contig_12005 17 . G A 25309.5 . AB=0.0485175;ABP=659.866;AC=0;AF=0;AN=12;AO=18;CIGAR=3X;DP=885;DPB=885;DPRA=0.792735;EPP=42.0968;EPPR=217.986;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=705;QR=3884;RO=99;RPL=0;RPP=42.0968;RPPR=217.986;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=99;SRP=217.986;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:122:17,9,96:17:667:9,96:346,3796:-307.249,-283.968,-336.112,0,-26.4624,-25.9603 0|0:202:34,0,166:34:1332:0,166:0,6552:-528.93,-539.165,-648.696,0,-109.627,-59.6559 0|0:111:26,5,79:26:1022:5,79:202,3124:-249.265,-240.437,-322.993,0,-67.4244,-60.2993 0|0:138:22,4,110:22:863:4,110:157,4382:-354.205,-347.915,-417.68,0,-58.0529,-37.852 0|0:133:0,0,133:0:0:0,133:0,5184:-466.47,-466.47,-466.47,-40.037,-40.037,0 0|0:179:0,0,179:0:0:0,179:0,7026:-632.049,-632.049,-632.049,-53.8844,-53.8844,0 dDocent_Contig_12006 44 . C G 603.053 . AB=0.220472;ABP=89.2024;AC=2;AF=0.25;AN=8;AO=28;CIGAR=1X;DP=254;DPB=254;DPRA=1;EPP=63.8115;EPPR=491.592;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1125;QR=8895;RO=225;RPL=0;RPP=63.8115;RPPR=491.592;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=225;SRP=491.592;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:84:67,17:67:2623:17:686:-36.7828,0,-210.915 0/0:49:49,0:49:1914:0:0:0,-14.7505,-172.468 0/0:78:77,0:77:3077:0:0:0,-23.1793,-276.919 0/1:43:32,11:32:1281:11:439:-26.9205,0,-102.614 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12007 1 . N G 198.682 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=4.45795;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=56;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=210;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=2;SAP=4.45795;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:176:-16.167,-1.50515,0 dDocent_Contig_12008 23 . G A 44.6941 . AB=0.4;ABP=3.44459;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=1X;DP=143;DPB=143;DPRA=0.181159;EPP=7.35324;EPPR=309.188;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.950355;PAO=0;PQA=0;PQR=0;PRO=0;QA=79;QR=5656;RO=141;RPL=0;RPP=7.35324;RPPR=309.188;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=141;SRP=309.188;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:476:0:0:0,-3.61236,-43.1823 0/1:5:3,2:3:122:2:79:-5.99209,0,-9.86734 0/0:9:9,0:9:358:0:0:0,-2.70927,-32.5804 0/0:2:2,0:2:82:0:0:0,-0.60206,-7.77968 0/0:84:84,0:84:3380:0:0:0,-25.2865,-304.241 0/0:31:31,0:31:1238:0:0:0,-9.33193,-111.69 dDocent_Contig_12009 40 . T A 328.588 . AB=0.313725;ABP=18.3809;AC=4;AF=0.333333;AN=12;AO=16;CIGAR=1X;DP=63;DPB=63;DPRA=2.125;EPP=37.7539;EPPR=105.07;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=599;QR=1572;RO=47;RPL=0;RPP=37.7539;RPPR=105.07;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=47;SRP=105.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:16,3:16:528:3:120:-5.46812,0,-42.1072 0/1:18:11,7:11:385:7:245:-16.9667,0,-29.5648 0/1:4:1,3:1:34:3:122:-10.1684,0,-2.19479 0/1:10:7,3:7:223:3:112:-7.43342,0,-17.3737 0/0:7:7,0:7:241:0:0:0,-2.10721,-22.0248 0/0:5:5,0:5:161:0:0:0,-1.50515,-14.8068 dDocent_Contig_12010 5 . T G 1241.99 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=41;CIGAR=2I1X3M2X;DP=43;DPB=59.3333;DPRA=0;EPP=92.0407;EPPR=0;GTI=0;LEN=1;MEANALT=1.33333;MQM=40.8049;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1397;QR=0;RO=0;RPL=0;RPP=92.0407;RPPR=0;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:1:0,1:0:0:1:35:-3.42101,-0.30103,0 1|1:7:0,7:0:0:7:241:-21.5707,-2.10721,0 1|1:13:0,13:0:0:13:430:-36.8772,-3.91339,0 1|1:16:0,16:0:0:16:553:-49.0505,-4.81648,0 1|1:3:0,1:0:0:1:35:-3.08322,-0.30103,0 1|1:3:0,3:0:0:3:103:-9.41785,-0.90309,0 dDocent_Contig_12012 8 . C T 158.171 . AB=0.285714;ABP=8.59409;AC=3;AF=0.3;AN=10;AO=4;CIGAR=1X4M;DP=59;DPB=59;DPRA=0.466667;EPP=11.6962;EPPR=115.927;GTI=0;LEN=1;MEANALT=1.5;MQM=40;MQMR=60;NS=5;NUMALT=2;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=148;QR=2030;RO=52;RPL=0;RPP=11.6962;RPPR=115.927;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=52;SRP=115.927;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 0|0:22:22,0,0:22:866:0,0:0,0:0,-6.62266,-78.2581,-6.62266,-78.2581,-78.2581 0|0:13:13,0,0:13:504:0,0:0,0:0,-3.91339,-45.7066,-3.91339,-45.7066,-45.7066 0|0:10:10,0,0:10:383:0,0:0,0:0,-3.0103,-34.8226,-3.0103,-34.8226,-34.8226 0|1:10:7,0,3:7:277:0,3:0,109:-6.70339,-8.8106,-31.6423,0,-23.1931,-22.29 1|1:4:0,3,1:0:0:3,1:119,39:-12.3843,-3.34509,-2.442,-9.40474,0,-9.10371 dDocent_Contig_12014 32 . C A 6169.9 . AB=0.521583;ABP=4.13509;AC=8;AF=0.666667;AN=12;AO=199;CIGAR=1X;DP=332;DPB=332;DPRA=0;EPP=435.133;EPPR=291.816;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7848;QR=5217;RO=133;RPL=0;RPP=435.133;RPPR=291.816;RPR=199;RUN=1;SAF=199;SAP=435.133;SAR=0;SRF=133;SRP=291.816;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:25:0,25:0:0:25:969:-87.5001,-7.52575,0 0/1:127:61,66:61:2382:66:2598:-195.724,0,-176.314 1/1:29:0,29:0:0:29:1150:-103.783,-8.72987,0 0/1:75:31,44:31:1222:44:1739:-134.149,0,-87.6817 0/1:46:33,13:33:1311:13:517:-33.027,0,-104.411 0/1:30:8,22:8:302:22:875:-70.0294,0,-18.4949 dDocent_Contig_12015 34 . G A 2913.34 . AB=0.0625;ABP=56.2114;AC=0;AF=0;AN=12;AO=2;CIGAR=6M1X12M1X4M1X3M;DP=264;DPB=251;DPRA=0;EPP=7.35324;EPPR=293.988;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.529851;PAO=0;PQA=0;PQR=0;PRO=0;QA=80;QR=5215;RO=134;RPL=0;RPP=7.35324;RPPR=293.988;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=134;SRP=293.988;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:42:17,17,0,8:17:652:17,0,8:658,0,281:-48.9528,0,-48.4143,-54.0703,-53.5318,-107.583,-31.2168,-30.6772,-84.725,-82.3167 0|0:58:34,21,0,1:34:1335:21,0,1:794,0,36:-54.8339,0,-103.482,-65.069,-109.804,-174.875,-62.1324,-106.867,-171.938,-171.637 0|0:33:11,15,0,5:11:426:15,0,5:589,0,164:-45.1934,0,-30.5297,-48.5047,-35.0451,-83.5052,-36.1913,-22.733,-71.1868,-69.6816 0|0:55:24,31,0,0:24:932:31,0,0:1202,0,0:-91.9057,0,-67.6323,-99.1304,-76.9642,-175.707,-99.1304,-76.9642,-175.707,-175.707 0|0:32:21,8,2,0:21:814:8,2,0:302,80,0:-18.4562,0,-64.5135,-18.18,-60.33,-84.4709,-24.7778,-66.9217,-85.073,-91.6643 0|0:44:27,16,0,0:27:1056:16,0,0:623,0,0:-43.2137,0,-82.1505,-51.3416,-86.967,-138.17,-51.3416,-86.967,-138.17,-138.17 dDocent_Contig_12016 36 . T A 426.488 . AB=0.279412;ABP=31.7504;AC=3;AF=0.25;AN=12;AO=19;CIGAR=1X;DP=117;DPB=117;DPRA=1.38776;EPP=44.2683;EPPR=215.815;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.979592;PAO=0;PQA=0;PQR=0;PRO=0;QA=747;QR=3913;RO=98;RPL=0;RPP=44.2683;RPPR=215.815;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=98;SRP=215.815;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:17,9:17:682:9:350:-24.0304,0,-53.8821 0/1:17:12,5:12:488:5:201:-13.353,0,-39.154 0/1:25:20,5:20:810:5:196:-10.4873,0,-65.6898 0/0:35:35,0:35:1375:0:0:0,-10.536,-124.001 0/0:7:7,0:7:282:0:0:0,-2.10721,-25.7521 0/0:7:7,0:7:276:0:0:0,-2.10721,-25.2084 dDocent_Contig_12017 9 . T G 32.4587 . AB=0.444444;ABP=3.25157;AC=1;AF=0.1;AN=10;AO=4;CIGAR=2X1M1X5M1X2M1X2M1X3M1X1M1X6M;DP=90;DPB=90;DPRA=0.418605;EPP=11.6962;EPPR=157.301;GTI=0;LEN=1;MEANALT=2;MQM=17;MQMR=60;NS=5;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0.973333;PAO=0;PQA=0;PQR=0;PRO=0;QA=68;QR=2908;RO=75;RPL=0;RPP=11.6962;RPPR=165.871;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=74;SRP=157.301;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:19:14,0,3,0:14:550:0,3,0:0,115,0:-4.01897,-8.23339,-53.4988,0,-45.2506,-44.3475,-8.23339,-53.4988,-45.2506,-53.4988 0|0:19:19,0,0,0:19:745:0,0,0:0,0,0:0,-5.71957,-67.3786,-5.71957,-67.3786,-67.3786,-5.71957,-67.3786,-67.3786,-67.3786 0|0:19:17,0,0,2:17:663:0,0,2:0,0,78:-1.6839,-6.80141,-61.2985,-6.80141,-61.2985,-61.2985,0,-54.8867,-54.8867,-54.2847 0|0:24:21,0,2,0:21:806:0,2,0:0,79,0:0,-6.32163,-72.5824,-0.570803,-66.9964,-66.3943,-6.32163,-72.5824,-66.9964,-72.5824 .:.:.:.:.:.:.:. 0|1:9:4,4,0,0:4:144:4,0,0:68,0,0:-2.46007,0,-10.535,-3.66419,-11.7392,-15.4886,-3.66419,-11.7392,-15.4886,-15.4886 dDocent_Contig_12018 11 . T A 2012.65 . AB=0.339806;ABP=48.9275;AC=1;AF=0.0833333;AN=12;AO=70;CIGAR=6M1X12M;DP=448;DPB=447.526;DPRA=2.10204;EPP=155.013;EPPR=789.083;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2804;QR=14078;RO=362;RPL=0;RPP=155.013;RPPR=789.083;RPR=70;RUN=1;SAF=70;SAP=155.013;SAR=0;SRF=362;SRP=789.083;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:23:20,0,3,0,0:20:778:0,3,0,0:0,117,0,0:-3.98669,-10.0073,-73.941,0,-64.3232,-63.4201,-10.0073,-73.941,-64.3232,-73.941,-10.0073,-73.941,-64.3232,-73.941,-73.941 0|0:10:7,0,0,0,3:7:274:0,0,0,3:0,0,0,121:-8.26969,-10.3769,-32.8987,-10.3769,-32.8987,-32.8987,-10.3769,-32.8987,-32.8987,-32.8987,0,-22.9211,-22.9211,-22.9211,-22.018 0|0:19:19,0,0,0,0:19:738:0,0,0,0:0,0,0,0:0,-5.71957,-66.7466,-5.71957,-66.7466,-66.7466,-5.71957,-66.7466,-66.7466,-66.7466,-5.71957,-66.7466,-66.7466,-66.7466,-66.7466 0|0:13:10,3,0,0,0:10:380:3,0,0,0:104,0,0,0:-5.77546,0,-30.6392,-8.78576,-31.5423,-39.9742,-8.78576,-31.5423,-39.9742,-39.9742,-8.78576,-31.5423,-39.9742,-39.9742,-39.9742 0|0:177:170,0,0,0,0:170:6640:0,0,0,0:0,0,0,0:0,-51.1751,-597.158,-51.1751,-597.158,-597.158,-51.1751,-597.158,-597.158,-597.158,-51.1751,-597.158,-597.158,-597.158,-597.158 0|1:206:136,0,0,70,0:136:5268:0,0,70,0:0,0,2804,0:-190.455,-231.395,-664.139,-231.395,-664.139,-664.139,0,-433.14,-433.14,-412.068,-231.395,-664.139,-664.139,-433.14,-664.139 dDocent_Contig_12019 185 . G C 971.74 . AB=0.202643;ABP=177.35;AC=6;AF=0.5;AN=12;AO=51;CIGAR=1X;DP=300;DPB=300;DPRA=0;EPP=113.755;EPPR=543.707;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2022;QR=9726;RO=249;RPL=51;RPP=113.755;RPPR=543.707;RPR=0;RUN=1;SAF=0;SAP=113.755;SAR=51;SRF=0;SRP=543.707;SRR=249;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 0/1:31:22,9:22:832:9:366:-23.973,0,-65.8569 0/1:9:7,2:7:272:2:82:-5.07041,0,-22.1345 0/1:7:3,4:3:121:4:164:-13.0427,0,-9.17278 0/1:180:149,31:149:5849:31:1205:-54.5298,0,-472.035 0/0:71:68,3:68:2652:3:123:0,-9.90834,-227.34 dDocent_Contig_12021 67 . G A 350.135 . AB=0.211538;ABP=78.1767;AC=4;AF=0.333333;AN=12;AO=23;CIGAR=1X;DP=183;DPB=183;DPRA=0.94375;EPP=52.9542;EPPR=348.274;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.478261;PAIREDR=0.968553;PAO=0;PQA=0;PQR=0;PRO=0;QA=830;QR=5869;RO=159;RPL=23;RPP=52.9542;RPPR=348.274;RPR=0;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=159;SRP=348.274;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:59:46,13:46:1613:13:461:-24.0614,0,-127.687 0/1:24:20,3:20:733:3:111:-3.06034,0,-59.0066 0/0:32:32,0:32:1212:0:0:0,-9.63296,-109.375 0/1:8:7,1:7:264:1:37:-1.28959,0,-21.7113 0/0:47:46,1:46:1738:1:36:0,-10.5501,-153.078 0/1:13:8,5:8:309:5:185:-13.0937,0,-24.2593 dDocent_Contig_12022 7 . C T 722.718 . AB=0.208556;ABP=140.974;AC=4;AF=0.333333;AN=12;AO=40;CIGAR=1X;DP=266;DPB=266;DPRA=1.13;EPP=89.8692;EPPR=493.763;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.425;PAIREDR=0.371681;PAO=0;PQA=0;PQR=0;PRO=0;QA=1532;QR=8642;RO=226;RPL=0;RPP=89.8692;RPPR=493.763;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=226;SRP=493.763;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:38,1:38:1459:1:39:0,-7.84361,-127.689 0/1:69:61,8:61:2330:8:309:-7.4019,0,-189.139 0/0:40:40,0:40:1521:0:0:0,-12.0412,-137.162 0/1:36:29,7:29:1125:7:258:-12.7342,0,-90.7145 0/1:29:19,10:19:736:10:385:-26.2764,0,-57.8415 0/1:53:39,14:39:1471:14:541:-33.0811,0,-116.711 dDocent_Contig_12027 14 . A G 507.188 . AB=0.237624;ABP=63.403;AC=4;AF=0.333333;AN=12;AO=24;CIGAR=1X;DP=130;DPB=130;DPRA=1.74138;EPP=55.1256;EPPR=233.186;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.625;PAIREDR=0.45283;PAO=0;PQA=0;PQR=0;PRO=0;QA=965;QR=4260;RO=106;RPL=0;RPP=55.1256;RPPR=233.186;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=106;SRP=233.186;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:15:13,2:13:522:2:82:-3.26423,0,-42.8119 0/1:22:19,3:19:766:3:119:-4.47235,0,-62.6381 0/0:10:10,0:10:387:0:0:0,-3.0103,-35.1814 0/1:45:29,16:29:1173:16:649:-45.197,0,-92.3007 0/1:19:16,3:16:641:3:115:-5.00281,0,-52.3044 0/0:19:19,0:19:771:0:0:0,-5.71957,-69.7096 dDocent_Contig_12028 8 . C G 177.86 . AB=0.307692;ABP=11.3621;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=188;DPB=188;DPRA=0.305556;EPP=22.5536;EPPR=391.704;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=51.4972;NS=6;NUMALT=1;ODDS=0;PAIRED=0.222222;PAIREDR=0.743017;PAO=0;PQA=0;PQR=0;PRO=0;QA=351;QR=6894;RO=179;RPL=0;RPP=22.5536;RPPR=391.704;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=179;SRP=391.704;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:16,6:16:623:6:234:-14.8084,0,-47.9743 0/0:18:17,1:17:651:1:39:0,-1.52198,-39.1141 0/1:4:2,2:2:78:2:78:-6.19935,0,-6.19935 0/0:16:16,0:16:615:0:0:0,-4.81648,-45.4322 0/0:85:85,0:85:3265:0:0:0,-25.5875,-280.011 0/0:43:43,0:43:1662:0:0:0,-12.9443,-127.08 dDocent_Contig_12029 74 . A C 55.4262 . AB=0.263158;ABP=12.2676;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=61;DPB=61;DPRA=1.10345;EPP=16.0391;EPPR=120.27;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=188;QR=1855;RO=54;RPL=6;RPP=16.0391;RPPR=120.27;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=54;SRP=120.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:9,3:9:302:3:86:-4.41261,0,-23.8938 0/0:17:17,0:17:584:0:0:0,-5.11751,-52.8846 0/1:7:5,2:5:174:2:68:-4.35067,0,-13.8947 0/0:11:11,0:11:381:0:0:0,-3.31133,-34.6236 0/0:1:1,0:1:34:0:0:0,-0.30103,-3.39891 0/0:13:11,1:11:380:1:34:0,-0.558326,-31.1292 dDocent_Contig_12030 10 . A C 1053.85 . AB=0.357798;ABP=22.1551;AC=3;AF=0.25;AN=12;AO=39;CIGAR=1X;DP=196;DPB=196;DPRA=1.25287;EPP=87.6977;EPPR=343.931;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993631;PAO=0;PQA=0;PQR=0;PRO=0;QA=1582;QR=6244;RO=157;RPL=0;RPP=87.6977;RPPR=343.931;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=157;SRP=343.931;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:55:38,17:38:1510:17:692:-46.0518,0,-119.592 0/1:24:16,8:16:637:8:323:-22.2134,0,-50.4384 0/0:21:21,0:21:838:0:0:0,-6.32163,-75.7339 0/0:36:36,0:36:1438:0:0:0,-10.8371,-129.674 0/1:30:16,14:16:625:14:567:-42.342,0,-47.55 0/0:30:30,0:30:1196:0:0:0,-9.0309,-107.919 dDocent_Contig_12031 1 . N G 255.688 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0.857143;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=265;QR=0;RO=0;RPL=0;RPP=18.2106;RPPR=0;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:153:-14.1379,-1.20412,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:39:-3.89656,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:73:-6.9313,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_12032 92 . A T 98.6434 . AB=0;ABP=0;AC=2;AF=0.2;AN=10;AO=3;CIGAR=1X;DP=22;DPB=22;DPRA=0.631579;EPP=9.52472;EPPR=44.2683;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=40;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=105;QR=639;RO=19;RPL=3;RPP=9.52472;RPPR=44.2683;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=19;SRP=44.2683;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:4:4,0:4:135:0:0:0,-1.20412,-12.1182 0/0:2:2,0:2:56:0:0:0,-0.60206,-5.23686 0/0:9:9,0:9:308:0:0:0,-2.70927,-27.1917 0/0:4:4,0:4:140:0:0:0,-1.20412,-12.5086 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:105:-9.46597,-0.90309,0 dDocent_Contig_12033 191 . C T 195.766 . AB=0.285714;ABP=14.1779;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=164;DPB=164;DPRA=1.02941;EPP=20.3821;EPPR=341.76;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.769231;PAO=0;PQA=0;PQR=0;PRO=0;QA=324;QR=6226;RO=156;RPL=8;RPP=20.3821;RPPR=341.76;RPR=0;RUN=1;SAF=0;SAP=20.3821;SAR=8;SRF=0;SRP=341.76;SRR=156;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1086:0:0:0,-8.12781,-98.022 0/0:18:18,0:18:717:0:0:0,-5.41854,-64.8556 0/1:28:20,8:20:806:8:324:-21.0995,0,-64.4237 0/0:28:28,0:28:1118:0:0:0,-8.42884,-100.901 0/0:19:19,0:19:756:0:0:0,-5.71957,-68.3575 0/0:44:44,0:44:1743:0:0:0,-13.2453,-157.083 dDocent_Contig_12034 20 . C A 458.619 . AB=0.150235;ABP=229.343;AC=3;AF=0.25;AN=12;AO=38;CIGAR=1X;DP=483;DPB=483;DPRA=1.225;EPP=85.5263;EPPR=967.144;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1510;QR=17766;RO=444;RPL=0;RPP=85.5263;RPPR=967.144;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=444;SRP=967.144;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:55:45,9:45:1796:9:362:-16.3227,0,-145.234 0/0:130:124,6:124:4947:6:241:0,-17.0681,-423.044 0/1:44:39,5:39:1527:5:193:-4.49131,0,-124.417 0/1:114:96,18:96:3838:18:714:-30.2695,0,-311.094 0/0:62:62,0:62:2510:0:0:0,-18.6639,-226.029 0/0:78:78,0:78:3148:0:0:0,-23.4803,-283.377 dDocent_Contig_12035 107 . N G 161.918 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=169;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:134:-12.3909,-1.20412,0 dDocent_Contig_12037 22 . C T 81.9683 . AB=0.192308;ABP=24.391;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=110;DPB=110;DPRA=0.746032;EPP=16.0391;EPPR=228.843;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.798077;PAO=0;PQA=0;PQR=0;PRO=0;QA=246;QR=4093;RO=104;RPL=0;RPP=16.0391;RPPR=228.843;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=104;SRP=228.843;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:13:11,2:11:406:2:82:-3.86629,0,-32.954 0/0:23:23,0:23:916:0:0:0,-6.92369,-82.7467 0/1:13:10,3:10:384:3:123:-7.5514,0,-30.9941 0/0:21:20,1:20:786:1:41:0,-2.22706,-66.9625 0/0:23:23,0:23:923:0:0:0,-6.92369,-83.3731 0/0:17:17,0:17:678:0:0:0,-5.11751,-61.3504 dDocent_Contig_12038 166 . A C 700.333 . AB=0.234043;ABP=89.6382;AC=3;AF=0.375;AN=8;AO=33;CIGAR=1X;DP=172;DPB=172;DPRA=1.51613;EPP=74.6689;EPPR=287.723;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.705;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1298;QR=5514;RO=139;RPL=33;RPP=74.6689;RPPR=287.723;RPR=0;RUN=1;SAF=0;SAP=74.6689;SAR=33;SRF=0;SRP=304.845;SRR=139;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:31,0:31:1220:0:0:0,-9.33193,-109.659 0/1:51:40,11:40:1608:11:431:-23.7891,0,-129.601 0/1:34:23,11:23:895:11:433:-29.0873,0,-70.6193 0/1:56:45,11:45:1791:11:434:-22.5549,0,-144.549 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12039 32 . G T 243.673 . AB=0.30303;ABP=14.1309;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=183;DPB=183;DPRA=1.51923;EPP=29.068;EPPR=372.161;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0.841176;PAO=0;PQA=0;PQR=0;PRO=0;QA=475;QR=6798;RO=170;RPL=0;RPP=29.068;RPPR=372.161;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=170;SRP=372.161;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:46:44,2:44:1766:2:82:0,-6.0677,-151.375 0/1:33:22,10:22:881:10:393:-25.8902,0,-69.7731 0/0:34:34,0:34:1379:0:0:0,-10.235,-124.363 0/0:28:28,0:28:1095:0:0:0,-8.42884,-98.8286 0/0:30:30,0:30:1190:0:0:0,-9.0309,-107.375 0/0:12:12,0:12:487:0:0:0,-3.61236,-44.1813 dDocent_Contig_12040 11 . A T 130.484 . AB=0.140845;ABP=82.5596;AC=3;AF=0.25;AN=12;AO=12;CIGAR=2X3M1X;DP=166;DPB=166;DPRA=0.776923;EPP=29.068;EPPR=337.417;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9545;NS=6;NUMALT=1;ODDS=0;PAIRED=0.583333;PAIREDR=0.538961;PAO=0;PQA=0;PQR=0;PRO=0;QA=486;QR=6049;RO=154;RPL=0;RPP=29.068;RPPR=337.417;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=154;SRP=337.417;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:23:20,3:20:776:3:122:-4.4488,0,-63.2217 0|1:25:23,2:23:903:2:80:-0.0658253,0,-74.0544 0|0:30:28,2:28:1109:2:80:0,-1.43932,-92.5097 0|1:23:18,5:18:687:5:204:-11.8203,0,-55.2251 0|0:28:28,0:28:1104:0:0:0,-8.42884,-99.6502 0|0:37:37,0:37:1470:0:0:0,-11.1381,-132.555 dDocent_Contig_12041 22 . C T 149.288 . AB=0.216216;ABP=28.8919;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=111;DPB=111;DPRA=1;EPP=20.3821;EPPR=226.672;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=317;QR=4112;RO=103;RPL=0;RPP=20.3821;RPPR=226.672;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=103;SRP=226.672;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:6:6,0:6:239:0:0:0,-1.80618,-21.8843 0/1:22:18,4:18:714:4:155:-7.69913,0,-57.964 0/1:15:11,4:11:441:4:162:-10.4515,0,-35.5296 0/0:13:13,0:13:524:0:0:0,-3.91339,-47.5064 0/0:37:37,0:37:1479:0:0:0,-11.1381,-133.355 0/0:18:18,0:18:715:0:0:0,-5.41854,-64.673 dDocent_Contig_12042 56 . C A 45.3078 . AB=0.133333;ABP=38.0434;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=117;DPB=117;DPRA=1.72414;EPP=11.6962;EPPR=246.215;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.776786;PAO=0;PQA=0;PQR=0;PRO=0;QA=160;QR=4434;RO=112;RPL=4;RPP=11.6962;RPPR=246.215;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=112;SRP=246.215;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:26,4:26:1027:4:160:-5.75253,0,-83.6935 0/0:36:36,0:36:1434:0:0:0,-10.8371,-129.316 0/0:17:17,0:17:676:0:0:0,-5.11751,-61.1691 0/0:19:19,0:19:735:0:0:0,-5.71957,-66.4705 0/0:4:3,0:3:118:0:0:0,-0.90309,-10.7765 0/0:11:11,0:11:444:0:0:0,-3.31133,-40.3158 dDocent_Contig_12043 106 . N A 76.9657 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=3X13I1X;DP=3;DPB=12.75;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=28;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=111;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:3:0,3:0:0:3:111:-7.69602,-0.90309,0 dDocent_Contig_12044 45 . C T 188.842 . AB=0.152941;ABP=91.9385;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=350;DPB=350;DPRA=1;EPP=35.5824;EPPR=728.282;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.991018;PAO=0;PQA=0;PQR=0;PRO=0;QA=601;QR=13099;RO=334;RPL=0;RPP=35.5824;RPPR=728.282;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=334;SRP=728.282;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:31,0:31:1207:0:0:0,-9.33193,-108.911 0/1:65:54,11:54:2124:11:440:-20.3859,0,-171.793 0/1:20:18,2:18:722:2:79:-1.47664,0,-59.286 0/0:27:26,0:26:1031:0:0:0,-7.82678,-92.9856 0/0:117:117,0:117:4558:0:0:0,-35.2205,-410.18 0/0:90:88,2:88:3457:2:82:0,-19.313,-303.422 dDocent_Contig_12046 16 . C T 3036.39 . AB=0.0332429;ABP=2792.3;AC=0;AF=0;AN=12;AO=49;CIGAR=1X1M1X;DP=1474;DPB=1474;DPRA=0;EPP=109.412;EPPR=2632.66;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.795918;PAIREDR=0.928984;PAO=0;PQA=0;PQR=0;PRO=0;QA=1898;QR=47834;RO=1211;RPL=0;RPP=109.412;RPPR=2632.66;RPR=49;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=1211;SRP=2632.66;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:254:206,13,35:206:8118:13,35:503,1366:-50.2668,-70.972,-734.875,0,-626.512,-657.284 0|0:295:236,9,49:236:9385:9,49:362,1894:-84.4819,-125.69,-895.665,0,-742.843,-757.926 0|0:219:185,9,24:185:7308:9,24:338,954:-22.8848,-50.8982,-649.523,0,-573.693,-594.147 0|0:221:177,10,34:177:7034:10,34:386,1331:-56.1531,-77.7427,-653.812,0,-547.392,-568.851 0|0:263:224,4,34:224:8787:4,34:157,1342:-42.9815,-97.5008,-818.866,0,-709.657,-712.334 0|0:222:183,4,35:183:7202:4,35:152,1376:-58.093,-100.718,-691.923,0,-579.958,-581.887 dDocent_Contig_12047 8 . C A 3757.13 . AB=0.651685;ABP=38.5834;AC=8;AF=0.666667;AN=12;AO=116;CIGAR=1X4M;DP=178;DPB=178;DPRA=0;EPP=254.901;EPPR=105.07;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.939655;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4426;QR=1826;RO=47;RPL=0;RPP=254.901;RPPR=105.07;RPR=116;RUN=1;SAF=116;SAP=254.901;SAR=0;SRF=47;SRP=105.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:31:9,0,0,22:9:350:0,0,22:0,0,849:-67.401,-70.1102,-98.8726,-70.1102,-98.8726,-98.8726,0,-29.15,-29.15,-22.5274 0|1:26:18,0,0,8:18:701:0,0,8:0,0,311:-20.5275,-25.9461,-83.5607,-25.9461,-83.5607,-83.5607,0,-58.0032,-58.0032,-55.595 0|1:37:11,0,0,26:11:417:0,0,26:0,0,996:-78.8149,-82.1262,-116.311,-82.1262,-116.311,-116.311,0,-34.5643,-34.5643,-26.7376 0|1:36:9,0,3,23:9:358:0,3,23:0,115,871:-68.6953,-71.4046,-100.887,-61.9651,-91.4477,-90.5446,0,-29.4895,-20.0533,-22.5658 1|1:40:0,10,0,30:0:0:10,0,30:393,0,1137:-125.927,-93.598,-90.5877,-125.927,-93.598,-125.927,-32.7184,0,-32.7184,-23.6875 1|1:8:0,1,0,7:0:0:1,0,7:40,0,262:-25.1289,-21.8307,-21.5296,-25.1289,-21.8307,-25.1289,-3.69465,0,-3.69465,-1.58744 dDocent_Contig_12048 8 . C T 71.088 . AB=0.125;ABP=90.9549;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=215;DPB=215;DPRA=1.00699;EPP=22.5536;EPPR=450.334;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.777778;PAIREDR=0.436893;PAO=0;PQA=0;PQR=0;PRO=0;QA=347;QR=7888;RO=206;RPL=0;RPP=22.5536;RPPR=450.334;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=206;SRP=450.334;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1281:0:0:0,-9.93399,-115.579 0/0:41:41,0:41:1582:0:0:0,-12.3422,-142.647 0/0:29:29,0:29:1110:0:0:0,-8.72987,-100.203 0/0:40:40,0:40:1507:0:0:0,-12.0412,-135.898 0/1:32:27,5:27:1032:5:191:-7.92514,0,-83.5531 0/1:40:36,4:36:1376:4:156:-2.37609,0,-112.083 dDocent_Contig_12049 13 . T A 1904.27 . AB=0.53125;ABP=4.09604;AC=5;AF=0.416667;AN=12;AO=68;CIGAR=1X;DP=135;DPB=135;DPRA=3.65714;EPP=150.67;EPPR=131.646;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.926471;PAIREDR=0.880597;PAO=0;PQA=0;PQR=0;PRO=0;QA=2628;QR=2639;RO=67;RPL=0;RPP=150.67;RPPR=148.499;RPR=68;RUN=1;SAF=68;SAP=150.67;SAR=0;SRF=65;SRP=131.646;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:18:11,7:11:433:7:281:-20.2436,0,-33.9031 0/1:43:23,20:23:918:20:793:-58.7436,0,-69.9826 0/1:35:10,25:10:394:25:968:-76.8798,0,-25.28 0/1:11:8,3:8:320:3:106:-6.57418,0,-25.8552 0/1:21:8,13:8:298:13:480:-37.2076,0,-20.8455 0/0:7:7,0:7:276:0:0:0,-2.10721,-25.2076 dDocent_Contig_12051 14 . G T 297.625 . AB=0.197531;ABP=67.377;AC=3;AF=0.25;AN=12;AO=17;CIGAR=1X;DP=122;DPB=122;DPRA=2.04167;EPP=39.9253;EPPR=231.015;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.705882;PAIREDR=0.904762;PAO=0;PQA=0;PQR=0;PRO=0;QA=688;QR=4198;RO=105;RPL=0;RPP=39.9253;RPPR=231.015;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=105;SRP=231.015;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:16,1:16:637:1:41:0,-1.02294,-53.5705 0/1:34:26,8:26:1051:8:325:-19.3846,0,-84.6448 0/1:35:30,5:30:1189:5:203:-8.11701,0,-96.7372 0/0:16:16,0:16:642:0:0:0,-4.81648,-58.1147 0/0:8:8,0:8:316:0:0:0,-2.40824,-28.8038 0/1:12:9,3:9:363:3:119:-7.48265,0,-29.4214 dDocent_Contig_12052 44 . C A 6621.28 . AB=0.722222;ABP=87.939;AC=8;AF=0.666667;AN=12;AO=206;CIGAR=1X;DP=261;DPB=261;DPRA=0;EPP=450.334;EPPR=122.441;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.985437;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8082;QR=2188;RO=55;RPL=0;RPP=450.334;RPPR=122.441;RPR=206;RUN=1;SAF=206;SAP=450.334;SAR=0;SRF=55;SRP=122.441;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:59:27,32:27:1078:32:1253:-95.2781,0,-79.5489 0/1:72:8,64:8:315:64:2529:-206.085,0,-7.04105 0/1:25:13,12:13:525:12:458:-34.0357,0,-40.0709 0/1:42:7,35:7:270:35:1379:-111.733,0,-12.0171 1/1:27:0,27:0:0:27:1066:-96.2348,-8.12781,0 1/1:36:0,36:0:0:36:1397:-125.983,-10.8371,0 dDocent_Contig_12053 10 . T G 2238.81 . AB=0.258065;ABP=192.139;AC=4;AF=0.333333;AN=12;AO=103;CIGAR=1X;DP=483;DPB=483;DPRA=0;EPP=226.672;EPPR=825.998;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997361;PAO=0;PQA=0;PQR=0;PRO=0;QA=4085;QR=15146;RO=379;RPL=0;RPP=226.672;RPPR=825.998;RPR=103;RUN=1;SAF=103;SAP=226.672;SAR=0;SRF=379;SRP=825.998;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:56:50,6:50:1972:6:238:-4.9361,0,-160.815 0/1:90:61,29:61:2447:29:1152:-76.8683,0,-193.281 0/0:49:46,3:46:1846:3:122:0,-3.37798,-154.974 0/0:62:58,4:58:2324:4:163:0,-3.60543,-194.259 0/1:107:76,31:76:3032:31:1241:-79.7504,0,-240.76 0/1:119:88,30:88:3525:30:1169:-69.5476,0,-281.349 dDocent_Contig_12054 14 . C T 333.839 . AB=0.304348;ABP=18.305;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=1068;DPB=1068;DPRA=0.291845;EPP=42.0968;EPPR=2283.06;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=700;QR=42393;RO=1050;RPL=0;RPP=42.0968;RPPR=2283.06;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=1050;SRP=2283.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:241:241,0:241:9722:0:0:0,-72.5482,-874.329 0/0:247:247,0:247:9994:0:0:0,-74.3544,-898.757 0/0:230:230,0:230:9270:0:0:0,-69.2369,-833.685 0/0:214:214,0:214:8658:0:0:0,-64.4204,-778.666 0/1:46:32,14:32:1297:14:538:-34.9068,0,-103.145 0/0:90:86,4:86:3452:4:162:0,-12.1257,-295.744 dDocent_Contig_12055 81 . G T 76.3769 . AB=0.444444;ABP=3.25157;AC=1;AF=0.125;AN=8;AO=4;CIGAR=1X;DP=84;DPB=84;DPRA=0.36;EPP=11.6962;EPPR=176.728;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=127;QR=2711;RO=80;RPL=4;RPP=11.6962;RPPR=176.728;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=80;SRP=176.728;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:9:5,4:5:172:4:127:-9.03563,0,-13.1092 0/0:39:39,0:39:1305:0:0:0,-11.7402,-117.746 0/0:17:17,0:17:581:0:0:0,-5.11751,-52.6138 0/0:19:19,0:19:653:0:0:0,-5.71957,-59.093 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12056 11 . G A 32.2721 . AB=0.130435;ABP=30.2953;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=243;DPB=243;DPRA=1.42254;EPP=16.0391;EPPR=517.649;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.987342;PAO=0;PQA=0;PQR=0;PRO=0;QA=204;QR=9403;RO=237;RPL=0;RPP=16.0391;RPPR=517.649;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=237;SRP=517.649;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:20,3:20:810:3:122:-4.4488,0,-66.2919 0/0:31:31,0:31:1230:0:0:0,-9.33193,-110.971 0/0:38:38,0:38:1512:0:0:0,-11.4391,-136.323 0/0:18:18,0:18:713:0:0:0,-5.41854,-64.495 0/0:55:55,0:55:2185:0:0:0,-16.5566,-196.825 0/0:78:75,3:75:2953:3:82:0,-15.8317,-258.221 dDocent_Contig_12057 9 . C A 611.409 . AB=0.232;ABP=80.9922;AC=1;AF=0.0833333;AN=12;AO=42;CIGAR=1X;DP=542;DPB=542;DPRA=2.25098;EPP=94.2121;EPPR=962.367;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.822;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.924;PAO=0;PQA=0;PQR=0;PRO=0;QA=1606;QR=19124;RO=500;RPL=0;RPP=94.2121;RPPR=1088.75;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=485;SRP=962.367;SRR=15;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:836:0:0:0,-6.62266,-75.5611 0/0:119:119,0:119:4553:0:0:0,-35.8226,-409.813 0/0:22:22,0:22:853:0:0:0,-6.62266,-77.0923 0/0:92:92,0:92:3468:0:0:0,-27.6948,-312.256 0/0:162:149,13:149:5754:13:495:0,-3.87114,-472.916 0/1:125:96,29:96:3660:29:1111:-62.6637,0,-290.374 dDocent_Contig_12058 107 . N T 1130.79 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=38;CIGAR=1X;DP=38;DPB=38;DPRA=0;EPP=85.5263;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1226;QR=0;RO=0;RPL=0;RPP=85.5263;RPPR=0;RPR=38;RUN=1;SAF=0;SAP=85.5263;SAR=38;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:66:-6.26831,-0.60206,0 1/1:9:0,9:0:0:9:284:-25.8688,-2.70927,0 1/1:8:0,8:0:0:8:258:-23.5367,-2.40824,0 1/1:15:0,15:0:0:15:494:-44.7757,-4.51545,0 1/1:3:0,3:0:0:3:92:-8.58453,-0.90309,0 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 dDocent_Contig_12059 25 . T C 1384.16 . AB=0.406504;ABP=12.3494;AC=4;AF=0.333333;AN=12;AO=50;CIGAR=1X1M;DP=158;DPB=158;DPRA=1.75714;EPP=111.584;EPPR=231.015;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2003;QR=4154;RO=105;RPL=0;RPP=111.584;RPPR=231.015;RPR=50;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=105;SRP=231.015;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:7:7,0,0:7:282:0,0:0,0:0,-2.10721,-25.7526,-2.10721,-25.7526,-25.7526 0|0:28:28,0,0:28:1091:0,0:0,0:0,-8.42884,-98.4761,-8.42884,-98.4761,-98.4761 0|1:37:31,0,6:31:1242:0,6:0,244:-11.2007,-20.5326,-122.848,0,-102.721,-100.915 0|1:33:30,0,3:30:1194:0,3:0,123:-1.5308,-10.5617,-108.862,0,-98.7084,-97.8053 0|1:24:4,3,17:4:155:3,17:121,667:-53.6356,-44.8638,-56.6933,0,-2.74354,-7.607 0|1:29:5,0,24:5:190:0,24:0,969:-78.7774,-80.2825,-95.8568,0,-15.958,-8.73324 dDocent_Contig_12060 42 . C T 282.997 . AB=0.229508;ABP=41.7764;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=184;DPB=184;DPRA=0.99187;EPP=33.4109;EPPR=372.161;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=546;QR=6718;RO=170;RPL=0;RPP=33.4109;RPPR=372.161;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=170;SRP=372.161;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:1037:0:0:0,-7.82678,-93.6279 0/0:31:31,0:31:1236:0:0:0,-9.33193,-111.515 0/1:27:24,3:24:931:3:122:-3.24468,0,-75.9656 0/1:34:23,11:23:906:11:424:-28.2727,0,-71.6119 0/0:41:41,0:41:1625:0:0:0,-12.3422,-146.484 0/0:25:25,0:25:983:0:0:0,-7.52575,-88.7705 dDocent_Contig_12061 25 . A G 158.769 . AB=0.1875;ABP=43.7254;AC=3;AF=0.25;AN=12;AO=10;CIGAR=1X;DP=89;DPB=89;DPRA=2.46667;EPP=24.725;EPPR=174.557;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=398;QR=3160;RO=79;RPL=0;RPP=24.725;RPPR=174.557;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=79;SRP=174.557;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:11,1:11:439:1:40:-0.383319,0,-36.2508 0/1:20:17,3:17:692:3:122:-5.35189,0,-56.5873 0/0:4:4,0:4:163:0:0:0,-1.20412,-15.0584 0/0:11:11,0:11:439:0:0:0,-3.31133,-39.8636 0/1:16:11,5:11:442:5:202:-13.745,0,-35.3185 0/0:26:25,1:25:985:1:34:0,-4.42787,-85.5468 dDocent_Contig_12063 1 . N G 70.2652 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=74;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:74:-7.02543,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12065 124 . C T 80.2902 . AB=0.166667;ABP=31.9633;AC=2;AF=0.166667;AN=12;AO=5;CIGAR=1X;DP=108;DPB=108;DPRA=0.769231;EPP=13.8677;EPPR=226.672;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.631068;PAO=0;PQA=0;PQR=0;PRO=0;QA=202;QR=4123;RO=103;RPL=5;RPP=13.8677;RPPR=226.672;RPR=0;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=226.672;SRR=103;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:15,4:15:584:4:162:-9.24739,0,-47.1713 0/1:11:10,1:10:387:1:40:-0.684349,0,-31.8672 0/0:9:9,0:9:369:0:0:0,-2.70927,-33.5755 0/0:22:22,0:22:881:0:0:0,-6.62266,-79.5992 0/0:16:16,0:16:642:0:0:0,-4.81648,-58.1138 0/0:31:31,0:31:1260:0:0:0,-9.33193,-113.665 dDocent_Contig_12066 25 . T C 301.946 . AB=0.311111;ABP=16.956;AC=3;AF=0.25;AN=12;AO=15;CIGAR=1X;DP=92;DPB=92;DPRA=1.41667;EPP=35.5824;EPPR=170.214;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.5584;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.987013;PAO=0;PQA=0;PQR=0;PRO=0;QA=573;QR=3070;RO=77;RPL=0;RPP=35.5824;RPPR=170.214;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=77;SRP=170.214;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:2:2,0:2:81:0:0:0,-0.60206,-7.68573 0/1:16:12,4:12:471:4:135:-7.66092,0,-37.9232 0/0:23:22,1:22:890:1:41:0,-2.82912,-76.3124 0/1:16:11,5:11:437:5:197:-13.2897,0,-34.864 0/0:22:22,0:22:878:0:0:0,-6.62266,-78.0523 0/1:13:8,5:8:313:5:200:-14.4656,0,-24.6159 dDocent_Contig_12067 8 . C T 43.7891 . AB=0.106383;ABP=129.51;AC=3;AF=0.25;AN=12;AO=13;CIGAR=1X;DP=163;DPB=163;DPRA=2.21667;EPP=31.2394;EPPR=328.731;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993333;PAO=0;PQA=0;PQR=0;PRO=0;QA=504;QR=5757;RO=150;RPL=0;RPP=31.2394;RPPR=328.731;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=150;SRP=328.731;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:23,3:23:889:3:115:-2.89811,0,-72.5022 0/0:39:36,3:36:1397:3:117:0,-0.829789,-115.1 0/1:32:28,4:28:1072:4:155:-4.69248,0,-87.1502 0/1:36:33,3:33:1267:3:117:-0.0733007,0,-103.485 0/0:11:11,0:11:404:0:0:0,-3.31133,-36.7004 0/0:19:19,0:19:728:0:0:0,-5.71957,-65.8486 dDocent_Contig_12068 107 . N G 6423.12 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=212;CIGAR=1X4M;DP=220;DPB=220.2;DPRA=0;EPP=454.718;EPPR=0;GTI=0;LEN=1;MEANALT=1.66667;MQM=55.4575;MQMR=0;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0.5;PQA=3.5;PQR=3.5;PRO=0.5;QA=7174;QR=0;RO=0;RPL=0;RPP=463.362;RPPR=0;RPR=212;RUN=1;SAF=1;SAP=454.718;SAR=211;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:29:0,0,29:0:0:0,29:0,976:-88.103,-88.103,-88.103,-8.72987,-8.72987,0 1|1:48:0,4,44:0:0:4,44:137,1501:-133.711,-122.636,-121.432,-13.2453,-1.82894,0 1|1:15:0,1,14:0:0:1,14:34,484:-43.3325,-40.5892,-40.2882,-4.21442,-1.1324,0 1|1:45:0,2,43:0:0:2,43:68,1465:-131.659,-126.172,-125.57,-12.9443,-7.11936,0 1|1:33:0,0,33:0:0:0,33:0,1119:-100.093,-100.093,-100.093,-9.93399,-9.93399,0 1|1:50:0,1,49:0:0:1,49:31,1629:-144.635,-142.154,-141.853,-14.7505,-11.9601,0 dDocent_Contig_12070 123 . T A 219.177 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=2X;DP=89;DPB=89;DPRA=0.426829;EPP=18.2106;EPPR=181.071;GTI=0;LEN=1;MEANALT=1;MQM=35;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.963415;PAO=0;PQA=0;PQR=0;PRO=0;QA=272;QR=2930;RO=82;RPL=0;RPP=18.2106;RPPR=181.071;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=181.071;SRR=82;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:26:26,0:26:921:0:0:0,-7.82678,-83.2014 0|0:19:19,0:19:671:0:0:0,-5.71957,-60.7139 0|0:6:6,0:6:222:0:0:0,-1.80618,-20.3381 0|0:25:25,0:25:894:0:0:0,-7.52575,-80.7761 0|0:6:6,0:6:222:0:0:0,-1.80618,-20.3381 1|1:7:0,7:0:0:7:272:-21.4406,-2.10721,0 dDocent_Contig_12071 107 . N A 65.1156 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=49.5;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=70;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.51047,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12072 155 . G T 387.875 . AB=0.466667;ABP=3.29983;AC=1;AF=0.1;AN=10;AO=14;CIGAR=1X;DP=215;DPB=215;DPRA=0.648649;EPP=33.4109;EPPR=435.133;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=542;QR=7694;RO=199;RPL=0;RPP=33.4109;RPPR=435.133;RPR=14;RUN=1;SAF=0;SAP=33.4109;SAR=14;SRF=0;SRP=435.133;SRR=199;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:16,14:16:603:14:542:-40.0885,0,-45.5598 0/0:58:57,0:57:2190:0:0:0,-17.1587,-196.881 0/0:22:22,0:22:864:0:0:0,-6.62266,-78.0658 0/0:50:49,0:49:1902:0:0:0,-14.7505,-171.298 ./.:.:.:.:.:.:.:. 0/0:55:55,0:55:2135:0:0:0,-16.5566,-192.34 dDocent_Contig_12073 114 . A T 35.8013 . AB=0.119403;ABP=87.3088;AC=1;AF=0.125;AN=8;AO=8;CIGAR=1X;DP=161;DPB=161;DPRA=2.1383;EPP=20.3821;EPPR=335.246;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=279;QR=5383;RO=153;RPL=0;RPP=20.3821;RPPR=335.246;RPR=8;RUN=1;SAF=0;SAP=20.3821;SAR=8;SRF=0;SRP=335.246;SRR=153;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:40,0:40:1409:0:0:0,-12.0412,-127.106 0/1:67:59,8:59:2061:8:279:-5.27899,0,-165.592 0/0:28:28,0:28:996:0:0:0,-8.42884,-89.9557 0/0:26:26,0:26:917:0:0:0,-7.82678,-82.8462 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12074 27 . A G 889.992 . AB=0.36;ABP=20.0346;AC=4;AF=0.333333;AN=12;AO=39;CIGAR=1X;DP=163;DPB=163;DPRA=0.851613;EPP=87.6977;EPPR=272.273;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.641026;PAIREDR=0.806452;PAO=0;PQA=0;PQR=0;PRO=0;QA=1491;QR=4808;RO=124;RPL=0;RPP=87.6977;RPPR=272.273;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=124;SRP=272.273;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:21,3:21:819:3:115:-3.49766,0,-66.8022 0/1:29:11,18:11:423:18:724:-56.7566,0,-29.6916 0/0:32:29,3:29:1126:3:103:0,-0.0273474,-92.0191 0/1:33:29,4:29:1145:4:157:-4.5739,0,-93.4002 0/0:31:31,0:31:1174:0:0:0,-9.33193,-105.941 0/1:14:3,11:3:121:11:392:-31.3897,0,-7.06578 dDocent_Contig_12076 13 . A T 58.2693 . AB=0.102564;ABP=163.532;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X;DP=364;DPB=364;DPRA=0.993443;EPP=50.7827;EPPR=743.482;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.590909;PAIREDR=0.483871;PAO=0;PQA=0;PQR=0;PRO=0;QA=866;QR=13505;RO=341;RPL=0;RPP=50.7827;RPPR=743.482;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=341;SRP=743.482;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:40,1:40:1549:1:41:0,-8.24766,-135.556 0/1:66:60,6:60:2387:6:239:-2.01522,0,-195.117 0/0:61:61,0:61:2409:0:0:0,-18.3628,-216.964 0/0:71:67,4:67:2644:4:137:0,-8.71118,-225.434 0/1:51:44,6:44:1761:6:245:-6.96875,0,-143.248 0/0:74:69,5:69:2755:5:204:0,-3.53219,-229.32 dDocent_Contig_12077 107 . N T 813.285 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=26;CIGAR=1X;DP=26;DPB=26;DPRA=0;EPP=59.4686;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=873;QR=0;RO=0;RPL=0;RPP=59.4686;RPPR=0;RPR=26;RUN=1;SAF=0;SAP=59.4686;SAR=26;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:7:0,7:0:0:7:243:-22.2089,-2.10721,0 1/1:9:0,9:0:0:9:306:-27.8705,-2.70927,0 1/1:5:0,5:0:0:5:175:-16.0937,-1.50515,0 1/1:3:0,3:0:0:3:88:-8.21101,-0.90309,0 1/1:1:0,1:0:0:1:26:-2.59983,-0.30103,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_12078 35 . C T 1552.83 . AB=0.439024;ABP=6.98251;AC=3;AF=0.25;AN=12;AO=58;CIGAR=1X;DP=247;DPB=247;DPRA=3.13235;EPP=128.956;EPPR=413.419;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2346;QR=7503;RO=189;RPL=0;RPP=128.956;RPPR=413.419;RPR=58;RUN=1;SAF=58;SAP=128.956;SAR=0;SRF=189;SRP=413.419;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:29,13:29:1154:13:526:-35.0419,0,-91.4965 0/1:31:16,15:16:631:15:608:-45.726,0,-47.7897 0/0:8:8,0:8:313:0:0:0,-2.40824,-28.5291 0/0:90:86,4:86:3398:4:162:0,-12.1257,-290.906 0/0:26:26,0:26:1055:0:0:0,-7.82678,-95.2358 0/1:50:24,26:24:952:26:1050:-79.7367,0,-70.927 dDocent_Contig_12079 100 . N A 120.865 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=4;CIGAR=8X3I2M;DP=5;DPB=6.5;DPRA=1.33333;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=32;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=128;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:1:0,1:0:0:1:32:-2.89911,-0.30103,0 1|1:2:0,2:0:0:2:64:-5.5083,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:1:0,0:0:0:0:0:0,0,0 1|1:1:0,1:0:0:1:32:-2.89911,-0.30103,0 dDocent_Contig_12080 1 . N G 512.472 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=16;CIGAR=1X;DP=16;DPB=16;DPRA=0;EPP=37.7539;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=542;QR=0;RO=0;RPL=0;RPP=37.7539;RPPR=0;RPR=16;RUN=1;SAF=0;SAP=37.7539;SAR=16;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:5:0,5:0:0:5:175:-16.0937,-1.50515,0 1/1:4:0,4:0:0:4:140:-12.9449,-1.20412,0 1/1:5:0,5:0:0:5:158:-14.532,-1.50515,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 dDocent_Contig_12081 108 . A G 1278.89 . AB=0.310976;ABP=53.9075;AC=5;AF=0.416667;AN=12;AO=54;CIGAR=1X;DP=205;DPB=205;DPRA=0;EPP=120.27;EPPR=330.903;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.62963;PAIREDR=0.642384;PAO=0;PQA=0;PQR=0;PRO=0;QA=2173;QR=5972;RO=151;RPL=54;RPP=120.27;RPPR=330.903;RPR=0;RUN=1;SAF=0;SAP=120.27;SAR=54;SRF=0;SRP=330.903;SRR=151;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:15,11:15:592:11:432:-31.405,0,-45.794 0/0:41:38,3:38:1527:3:121:0,-1.06224,-126.392 0/1:16:14,2:14:537:2:81:-2.86925,0,-43.8423 0/1:38:29,9:29:1165:9:369:-22.1363,0,-93.6917 0/1:43:32,11:32:1256:11:439:-26.9192,0,-100.36 0/1:41:23,18:23:895:18:731:-53.7718,0,-68.5142 dDocent_Contig_12082 22 . G A 270.655 . AB=0.173469;ABP=93.769;AC=3;AF=0.25;AN=12;AO=19;CIGAR=1X;DP=218;DPB=218;DPRA=1.20312;EPP=44.2683;EPPR=435.133;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.964824;PAO=0;PQA=0;PQR=0;PRO=0;QA=745;QR=7301;RO=199;RPL=0;RPP=44.2683;RPPR=435.133;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=199;SRP=435.133;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:28,6:28:976:6:236:-11.3763,0,-77.9066 0/1:39:31,8:31:1096:8:316:-17.0632,0,-87.2001 0/1:25:22,3:22:784:3:122:-3.84674,0,-63.3435 0/0:56:54,2:54:2047:2:71:0,-10.1173,-177.72 0/0:36:36,0:36:1339:0:0:0,-10.8371,-120.787 0/0:28:28,0:28:1059:0:0:0,-8.42884,-95.6139 dDocent_Contig_12083 120 . T A 317.177 . AB=0.538462;ABP=3.34437;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=90;DPB=90;DPRA=0.8;EPP=35.5824;EPPR=165.871;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=504;QR=2565;RO=75;RPL=0;RPP=35.5824;RPPR=165.871;RPR=15;RUN=1;SAF=0;SAP=35.5824;SAR=15;SRF=0;SRP=165.871;SRR=75;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:13,1:13:453:1:36:0,-0.616145,-37.5045 0/1:16:7,9:7:244:9:309:-23.3263,0,-17.4836 0/0:3:3,0:3:104:0:0:0,-0.90309,-9.70309 0/1:10:5,5:5:167:5:159:-11.6129,0,-12.3489 0/0:24:24,0:24:822:0:0:0,-7.22472,-74.2961 0/0:23:23,0:23:775:0:0:0,-6.92369,-70.0634 dDocent_Contig_12084 8 . C T 74.1066 . AB=0.116071;ABP=146.405;AC=3;AF=0.3;AN=10;AO=14;CIGAR=1X;DP=153;DPB=153;DPRA=18.875;EPP=33.4109;EPPR=304.845;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.935252;PAO=0;PQA=0;PQR=0;PRO=0;QA=532;QR=5343;RO=139;RPL=0;RPP=33.4109;RPPR=304.845;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=139;SRP=304.845;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:44:38,6:38:1465:6:233:-8.09476,0,-118.881 0/1:39:35,4:35:1336:4:155:-2.58527,0,-108.785 0/1:29:26,3:26:997:3:105:-1.06351,0,-81.311 0/0:39:38,1:38:1467:1:39:0,-7.84361,-128.409 0/0:2:2,0:2:78:0:0:0,-0.60206,-7.40347 ./.:.:.:.:.:.:.:. dDocent_Contig_12086 44 . A T 53.4771 . AB=0.181818;ABP=22.3561;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=160;DPB=160;DPRA=0.797101;EPP=11.6962;EPPR=341.76;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.737179;PAO=0;PQA=0;PQR=0;PRO=0;QA=146;QR=5999;RO=156;RPL=0;RPP=11.6962;RPPR=341.76;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=156;SRP=341.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:13:13,0:13:488:0:0:0,-3.91339,-44.2526 0/0:29:29,0:29:1124:0:0:0,-8.72987,-101.447 0/1:22:18,4:18:715:4:146:-6.87059,0,-58.0524 0/0:33:33,0:33:1276:0:0:0,-9.93399,-115.121 0/0:35:35,0:35:1325:0:0:0,-10.536,-119.518 0/0:28:28,0:28:1071:0:0:0,-8.42884,-96.6808 dDocent_Contig_12087 17 . A G 1087.96 . AB=0.3125;ABP=46.9826;AC=5;AF=0.416667;AN=12;AO=47;CIGAR=4M1X1M1X;DP=175;DPB=174.571;DPRA=0;EPP=105.07;EPPR=274.444;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.808511;PAIREDR=0.792;PAO=0;PQA=0;PQR=0;PRO=0;QA=1850;QR=4971;RO=125;RPL=0;RPP=105.07;RPPR=274.444;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=125;SRP=274.444;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:14:8,0,6:8:313:0,6:0,231:-16.9419,-19.3502,-45.0889,0,-26.1261,-24.3199 0|1:46:33,0,13:33:1311:0,13:0,511:-32.4842,-42.4182,-150.354,0,-108.329,-104.416 0|0:31:29,0,2:29:1164:0,2:0,78:0,-8.72987,-104.651,-1.92846,-98.2402,-97.6381 0|1:36:25,0,11:25:996:0,11:0,438:-28.9364,-36.4621,-118.481,0,-82.4162,-79.1049 0|1:26:19,2,5:19:756:2,5:81,194:-10.2072,-9.24283,-70.8962,0,-55.5614,-60.7361 0|1:22:11,1,10:11:431:1,10:41,398:-29.4481,-29.3743,-64.5119,0,-32.0398,-32.4151 dDocent_Contig_12088 53 . G A 129.708 . AB=0.184211;ABP=35.9253;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=148;DPB=148;DPRA=1.65432;EPP=20.3821;EPPR=304.845;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.733813;PAO=0;PQA=0;PQR=0;PRO=0;QA=321;QR=5420;RO=139;RPL=8;RPP=20.3821;RPPR=304.845;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=139;SRP=304.845;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:790:0:0:0,-6.0206,-71.4187 0/1:38:30,7:30:1169:7:282:-14.4937,0,-94.2622 0/0:21:21,0:21:829:0:0:0,-6.32163,-74.9192 0/0:29:28,1:28:1064:1:39:0,-4.83331,-92.1408 0/0:22:22,0:22:869:0:0:0,-6.62266,-78.5169 0/0:18:18,0:18:699:0:0:0,-5.41854,-63.2299 dDocent_Contig_12089 10 . T A 2493.04 . AB=0.184932;ABP=632.44;AC=5;AF=0.416667;AN=12;AO=149;CIGAR=1X;DP=915;DPB=915;DPRA=0;EPP=326.56;EPPR=1662.02;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5815;QR=30377;RO=764;RPL=0;RPP=326.56;RPPR=1662.02;RPR=149;RUN=1;SAF=149;SAP=326.56;SAR=0;SRF=764;SRP=1662.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:137:116,21:116:4613:21:801:-31.1648,0,-373.865 0/0:185:170,14:170:6760:14:519:0,-8.47067,-561.095 0/1:214:172,42:172:6851:42:1689:-87.8132,0,-551.866 0/1:192:157,35:157:6244:35:1373:-66.0324,0,-503.934 0/1:85:65,20:65:2580:20:778:-44.7518,0,-206.755 0/1:102:84,17:84:3329:17:655:-28.7637,0,-269.16 dDocent_Contig_12090 1 . N G 148.752 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=7.37776;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=161;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:161:-14.8749,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12092 22 . A T 2784.98 . AB=0.315789;ABP=42.2111;AC=3;AF=0.25;AN=12;AO=42;CIGAR=1X2M1X;DP=185;DPB=185;DPRA=0.810976;EPP=94.2121;EPPR=172.385;GTI=0;LEN=1;MEANALT=2.25;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1657;QR=3033;RO=78;RPL=0;RPP=94.2121;RPPR=172.385;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=78;SRP=172.385;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:47:37,0,2,7,1:37:1426:0,2,7,1:0,78,266,41:-10.6636,-21.8017,-138.878,-15.3887,-132.466,-131.864,0,-117.066,-110.654,-114.959,-18.4149,-135.494,-129.082,-113.681,-135.193 0|1:33:9,4,18,0,2:9:344:4,18,0,2:153,701,0,81:-54.8988,-45.0543,-72.068,0,-15.6618,-22.7974,-57.608,-73.2722,-28.2159,-85.8266,-50.9275,-66.5918,-21.5337,-79.1463,-78.5443 0|1:31:17,0,14,0,0:17:667:0,14,0,0:0,560,0,0:-41.412,-46.5296,-101.376,0,-55.2429,-51.0285,-46.5296,-101.376,-55.2429,-101.376,-46.5296,-101.376,-55.2429,-101.376,-101.376 1|0:22:5,0,8,9,0:5:200:0,8,9,0:0,318,359,0:-37.763,-39.2682,-55.7438,-13.0885,-29.5641,-27.1559,-9.7026,-26.1788,0,-23.4695,-39.2682,-55.7438,-29.5641,-26.1788,-55.7438 0|0:11:9,0,0,0,2:9:356:0,0,0,2:0,0,0,79:-4.18591,-6.89518,-36.1921,-6.89518,-36.1921,-36.1921,-6.89518,-36.1921,-36.1921,-36.1921,0,-29.6916,-29.6916,-29.6916,-29.0895 0|0:41:1,0,0,0,40:1:40:0,0,0,40:0,0,0,1584:-138.796,-139.097,-142.392,-139.097,-142.392,-142.392,-139.097,-142.392,-142.392,-142.392,-8.34655,-12.0412,-12.0412,-12.0412,0 dDocent_Contig_12093 53 . C A 1176.45 . AB=0.641791;ABP=14.7103;AC=2;AF=0.166667;AN=12;AO=43;CIGAR=1X;DP=297;DPB=297;DPRA=0.582609;EPP=96.3836;EPPR=554.564;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.930233;PAIREDR=0.73622;PAO=0;PQA=0;PQR=0;PRO=0;QA=1560;QR=9360;RO=254;RPL=20;RPP=3.46479;RPPR=3.55744;RPR=23;RUN=1;SAF=20;SAP=3.46479;SAR=23;SRF=123;SRP=3.55744;SRR=131;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:40,0:40:1482:0:0:0,-12.0412,-133.645 0/0:66:66,0:66:2468:0:0:0,-19.868,-222.298 0/0:46:46,0:46:1668:0:0:0,-13.8474,-150.373 0/0:78:78,0:78:2867:0:0:0,-23.4803,-258.211 0/1:20:9,11:9:318:11:404:-30.681,0,-22.9322 0/1:47:15,32:15:557:32:1156:-90.1854,0,-36.3129 dDocent_Contig_12094 48 . T G 1296.19 . AB=0.255814;ABP=25.2805;AC=6;AF=0.5;AN=12;AO=41;CIGAR=1X;DP=126;DPB=126;DPRA=0.688679;EPP=92.0407;EPPR=187.585;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1604;QR=3308;RO=85;RPL=0;RPP=92.0407;RPPR=187.585;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=85;SRP=187.585;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:6:6,0:6:229:0:0:0,-1.80618,-20.9726 0/0:47:47,0:47:1803:0:0:0,-14.1484,-162.502 0/1:30:21,9:21:836:9:352:-23.0063,0,-66.526 0/1:13:11,2:11:440:2:81:-3.77234,0,-36.042 1/1:24:0,24:0:0:24:930:-83.995,-7.22472,0 1/1:6:0,6:0:0:6:241:-22.0663,-1.80618,0 dDocent_Contig_12095 74 . C T 69.5082 . AB=0;ABP=0;AC=2;AF=0.2;AN=10;AO=8;CIGAR=1X;DP=305;DPB=305;DPRA=1.30744;EPP=20.3821;EPPR=647.938;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=304;QR=11064;RO=297;RPL=8;RPP=20.3821;RPPR=647.938;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=297;SRP=647.938;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:83:83,0:83:3068:0:0:0,-24.9855,-276.281 0/0:112:109,3:109:4057:3:116:0,-22.8991,-354.422 0/0:88:85,3:85:3176:3:119:0,-15.3952,-274.899 0/0:20:20,0:20:763:0:0:0,-6.0206,-68.9958 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_12096 20 . T C 236.806 . AB=0.164835;ABP=91.802;AC=2;AF=0.2;AN=10;AO=15;CIGAR=1X;DP=179;DPB=179;DPRA=1.55114;EPP=35.5824;EPPR=359.132;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=596;QR=6518;RO=164;RPL=0;RPP=35.5824;RPPR=359.132;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=164;SRP=359.132;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:29:23,6:23:889:6:237:-12.9725,0,-71.5822 0/0:29:29,0:29:1143:0:0:0,-8.72987,-103.15 0/0:30:30,0:30:1199:0:0:0,-9.0309,-108.183 0/1:62:53,9:53:2130:9:359:-14.0091,0,-173.209 ./.:.:.:.:.:.:.:. 0/0:29:29,0:29:1157:0:0:0,-8.72987,-104.406 dDocent_Contig_12097 28 . C T 91.1157 . AB=0.266667;ABP=10.1038;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=187;DPB=187;DPRA=0.436047;EPP=11.6962;EPPR=400.39;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=164;QR=7349;RO=183;RPL=0;RPP=11.6962;RPPR=400.39;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=183;SRP=400.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:34,0:34:1354:0:0:0,-10.235,-122.118 0/0:50:50,0:50:2017:0:0:0,-15.0515,-181.713 0/0:34:34,0:34:1371:0:0:0,-10.235,-123.642 0/1:15:11,4:11:445:4:164:-10.6344,0,-35.8897 0/0:19:19,0:19:761:0:0:0,-5.71957,-68.8113 0/0:35:35,0:35:1401:0:0:0,-10.536,-126.34 dDocent_Contig_12098 9 . A G 288.662 . AB=0.165414;ABP=132.335;AC=4;AF=0.333333;AN=12;AO=22;CIGAR=1X;DP=160;DPB=160;DPRA=2.46296;EPP=50.7827;EPPR=302.673;GTI=0;LEN=1;MEANALT=1;MQM=51.8182;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.927536;PAO=0;PQA=0;PQR=0;PRO=0;QA=837;QR=5237;RO=138;RPL=0;RPP=50.7827;RPPR=302.673;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=138;SRP=302.673;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:33,5:33:1254:5:195:-6.00019,0,-101.713 0/1:40:31,9:31:1170:9:334:-18.2664,0,-93.556 0/1:37:33,4:33:1257:4:156:-3.22917,0,-102.284 0/1:18:14,4:14:516:4:152:-8.5881,0,-41.3579 0/0:11:11,0:11:425:0:0:0,-3.31133,-38.6044 0/0:16:16,0:16:615:0:0:0,-4.81648,-55.6887 dDocent_Contig_12099 72 . T C 610.349 . AB=0.257576;ABP=70.3917;AC=6;AF=0.5;AN=12;AO=34;CIGAR=1X;DP=132;DPB=132;DPRA=0;EPP=76.8404;EPPR=215.815;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0882353;PAIREDR=0.755102;PAO=0;PQA=0;PQR=0;PRO=0;QA=1209;QR=3490;RO=98;RPL=34;RPP=76.8404;RPPR=215.815;RPR=0;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=98;SRP=215.815;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:7,5:7:251:5:168:-11.8377,0,-19.3254 0/1:42:31,11:31:1111:11:384:-22.2506,0,-87.656 0/1:21:14,7:14:505:7:259:-17.3437,0,-39.4655 0/1:12:8,4:8:282:4:144:-9.70109,0,-22.1093 0/1:25:20,5:20:705:5:181:-9.11782,0,-56.2478 0/1:20:18,2:18:636:2:73:-0.910699,0,-51.5476 dDocent_Contig_12100 38 . G T 237.206 . AB=0.434783;ABP=3.86001;AC=3;AF=0.25;AN=12;AO=11;CIGAR=1X;DP=86;DPB=86;DPRA=0.414894;EPP=26.8965;EPPR=165.871;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.909091;PAIREDR=0.68;PAO=0;PQA=0;PQR=0;PRO=0;QA=425;QR=2929;RO=75;RPL=0;RPP=26.8965;RPPR=165.871;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=75;SRP=165.871;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:569:0:0:0,-4.51545,-51.5323 0/0:32:32,0:32:1262:0:0:0,-9.63296,-113.851 0/1:8:4,4:4:147:4:156:-12.0086,0,-11.1775 0/0:16:15,1:15:590:1:39:0,-0.919915,-49.5373 0/1:5:2,3:2:82:3:116:-9.31187,0,-6.27453 0/1:10:7,3:7:279:3:114:-7.62192,0,-22.4685 dDocent_Contig_12101 107 . N A 333.105 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=10;CIGAR=1X;DP=10;DPB=10;DPRA=0;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0.9;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=348;QR=0;RO=0;RPL=0;RPP=24.725;RPPR=0;RPR=10;RUN=1;SAF=0;SAP=24.725;SAR=10;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:36:-3.59827,-0.30103,0 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:6:0,6:0:0:6:207:-18.9677,-1.80618,0 1/1:2:0,2:0:0:2:71:-6.74206,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12103 134 . N G 1018.72 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=42;CIGAR=1X;DP=42;DPB=42;DPRA=0;EPP=94.2121;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=30.4762;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0.309524;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1600;QR=0;RO=0;RPL=42;RPP=94.2121;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=94.2121;SAR=42;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:8:0,8:0:0:8:299:-19.3999,-2.40824,0 1/1:6:0,6:0:0:6:236:-18.9143,-1.80618,0 1/1:5:0,5:0:0:5:204:-14.6576,-1.50515,0 1/1:16:0,16:0:0:16:645:-37.657,-4.81648,0 1/1:7:0,7:0:0:7:216:-10.4647,-2.10721,0 ./.:.:.:.:.:.:.:. dDocent_Contig_12104 3 . A T 65.5375 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=6I1X1M1X;DP=2;DPB=6;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=69;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_12105 33 . T C 159.544 . AB=0.155844;ABP=82.2267;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=238;DPB=238;DPRA=2.3913;EPP=29.068;EPPR=493.763;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=448;QR=9028;RO=226;RPL=0;RPP=29.068;RPPR=493.763;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=226;SRP=493.763;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:6:6,0:6:245:0:0:0,-1.80618,-22.4295 0/0:58:58,0:58:2312:0:0:0,-17.4597,-208.23 0/0:85:85,0:85:3395:0:0:0,-25.5875,-305.577 0/1:77:65,12:65:2592:12:448:-17.4772,0,-210.232 0/0:4:4,0:4:159:0:0:0,-1.20412,-14.6914 0/0:8:8,0:8:325:0:0:0,-2.40824,-29.6194 dDocent_Contig_12107 12 . G T 1374.05 . AB=0.205797;ABP=262.385;AC=6;AF=0.5;AN=12;AO=71;CIGAR=1X;DP=345;DPB=345;DPRA=0;EPP=54.4222;EPPR=400.659;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.551095;PAO=0;PQA=0;PQR=0;PRO=0;QA=2782;QR=10740;RO=274;RPL=0;RPP=157.185;RPPR=597.994;RPR=71;RUN=1;SAF=56;SAP=54.4222;SAR=15;SRF=249;SRP=400.659;SRR=25;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:69:59,10:59:2319:10:396:-15.2274,0,-188.124 0/1:92:74,18:74:2888:18:703:-35.9051,0,-232.357 0/1:80:67,13:67:2624:13:513:-22.4362,0,-212.237 0/1:49:40,9:40:1561:9:343:-16.4727,0,-125.989 0/1:27:18,9:18:716:9:355:-24.1834,0,-56.6353 0/1:28:16,12:16:632:12:472:-34.4026,0,-48.7841 dDocent_Contig_12108 156 . C T 49.4086 . AB=0.136364;ABP=53.5464;AC=1;AF=0.1;AN=10;AO=6;CIGAR=1X;DP=127;DPB=127;DPRA=2.12048;EPP=16.0391;EPPR=265.758;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.7438;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.983471;PAO=0;PQA=0;PQR=0;PRO=0;QA=216;QR=4342;RO=121;RPL=0;RPP=16.0391;RPPR=265.758;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=265.758;SRR=121;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:561:0:0:0,-4.81648,-50.8106 0/0:53:53,0:53:1929:0:0:0,-15.9546,-173.438 0/0:5:5,0:5:185:0:0:0,-1.50515,-17.0093 0/1:44:38,6:38:1348:6:216:-6.54289,0,-108.356 ./.:.:.:.:.:.:.:. 0/0:9:9,0:9:319:0:0:0,-2.70927,-29.0504 dDocent_Contig_12109 38 . G A 1113.82 . AB=0.341772;ABP=20.1897;AC=6;AF=0.5;AN=12;AO=40;CIGAR=1X;DP=108;DPB=108;DPRA=1.15;EPP=89.8692;EPPR=150.67;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1562;QR=2717;RO=68;RPL=0;RPP=89.8692;RPPR=150.67;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=68;SRP=150.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:11:7,4:7:274:4:147:-10.2748,0,-21.711 0/1:29:25,4:25:1001:4:158:-5.8701,0,-81.6522 0/1:20:16,4:16:644:4:163:-9.03783,0,-52.2742 0/0:16:16,0:16:635:0:0:0,-4.81648,-57.4797 1/1:13:0,13:0:0:13:505:-45.7946,-3.91339,0 0/1:19:4,15:4:163:15:589:-47.626,0,-9.33886 dDocent_Contig_12110 8 . C T 52.9096 . AB=0.118644;ABP=77.5396;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=268;DPB=268;DPRA=1.4359;EPP=24.725;EPPR=457.41;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=51.7098;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.890196;PAO=0;PQA=0;PQR=0;PRO=0;QA=386;QR=9783;RO=255;RPL=0;RPP=24.725;RPPR=556.736;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=243;SRP=457.41;SRR=12;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:73:72,0:72:2733:0:0:0,-21.6742,-229.565 0/0:53:48,3:48:1843:3:117:0,-4.82899,-145.701 0/0:26:26,0:26:988:0:0:0,-7.82678,-87.3385 0/1:59:52,7:52:2016:7:269:-6.81384,0,-154.289 0/0:32:32,0:32:1232:0:0:0,-9.63296,-106.41 0/0:25:25,0:25:971:0:0:0,-7.52575,-85.3875 dDocent_Contig_12111 72 . G A 782.784 . AB=0.242574;ABP=119.281;AC=3;AF=0.25;AN=12;AO=49;CIGAR=1X;DP=274;DPB=274;DPRA=2.80556;EPP=109.412;EPPR=491.592;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995556;PAO=0;PQA=0;PQR=0;PRO=0;QA=1593;QR=7323;RO=225;RPL=49;RPP=109.412;RPPR=491.592;RPR=0;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=225;SRP=491.592;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:62:62,0:62:2020:0:0:0,-18.6639,-182.073 0/1:98:71,27:71:2347:27:875:-49.5515,0,-181.997 0/1:36:28,8:28:862:8:263:-13.1548,0,-67.0296 0/1:68:54,14:54:1779:14:455:-20.7935,0,-139.918 0/0:1:1,0:1:34:0:0:0,-0.30103,-3.39891 0/0:9:9,0:9:281:0:0:0,-2.70927,-25.5967 dDocent_Contig_12112 51 . G A 386.449 . AB=0.131148;ABP=147.182;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=2M1X3M;DP=314;DPB=322.667;DPRA=1.27083;EPP=37.7539;EPPR=580.622;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.625;PAIREDR=0.612782;PAO=0;PQA=0;PQR=0;PRO=0;QA=575;QR=9261;RO=266;RPL=11;RPP=7.89611;RPPR=28.6108;RPR=5;RUN=1;SAF=11;SAP=7.89611;SAR=5;SRF=161;SRP=28.6108;SRR=105;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:48:43,1,3,0:43:1470:1,3,0:22,117,0:0,-11.2883,-130.294,-3.2104,-120.975,-121.748,-12.9443,-130.595,-122.651,-132.272 0|0:65:62,3,0,0:62:2192:3,0,0:95,0,0:0,-10.704,-188.677,-18.6639,-189.58,-197.222,-18.6639,-189.58,-197.222,-197.222 0|0:33:33,0,0,0:33:1140:0,0,0:0,0,0:0,-9.93399,-102.899,-9.93399,-102.899,-102.899,-9.93399,-102.899,-102.899,-102.899 0|0:46:45,0,0,0:45:1582:0,0,0:0,0,0:0,-13.5463,-142.589,-13.5463,-142.589,-142.589,-13.5463,-142.589,-142.589,-142.589 0|0:59:44,11,0,4:44:1501:11,0,4:381,0,136:-17.7228,0,-118.478,-30.9681,-121.789,-152.753,-19.9395,-110.759,-141.723,-140.519 0|1:63:39,11,0,12:39:1376:11,0,12:405,0,439:-24.1438,-2.75951,-111.497,-35.884,-114.808,-147.924,0,-78.9309,-112.049,-108.436 dDocent_Contig_12113 8 . C G 44.9572 . AB=0.210526;ABP=16.8392;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=98;DPB=98;DPRA=1.20253;EPP=11.6962;EPPR=207.129;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=127;QR=3613;RO=94;RPL=0;RPP=11.6962;RPPR=207.129;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=94;SRP=207.129;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:2:2,0:2:78:0:0:0,-0.60206,-7.40347 0/0:31:31,0:31:1199:0:0:0,-9.33193,-108.206 0/0:12:12,0:12:459:0:0:0,-3.61236,-41.6599 0/0:6:6,0:6:230:0:0:0,-1.80618,-21.0663 0/0:28:28,0:28:1079:0:0:0,-8.42884,-97.4147 0/1:19:15,4:15:568:4:127:-6.01839,0,-45.7398 dDocent_Contig_12114 27 . C T 73.1409 . AB=0.0993789;ABP=227.454;AC=1;AF=0.0833333;AN=12;AO=36;CIGAR=1X;DP=839;DPB=839;DPRA=1.29274;EPP=81.1833;EPPR=1746.7;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.997509;PAO=0;PQA=0;PQR=0;PRO=0;QA=1430;QR=31929;RO=803;RPL=0;RPP=81.1833;RPPR=1746.7;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=803;SRP=1746.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:147:147,0:147:5775:0:0:0,-44.2514,-519.558 0/0:144:135,9:135:5287:9:361:0,-10.4953,-442.831 0/0:87:87,0:87:3456:0:0:0,-26.1896,-311.084 0/0:116:115,1:115:4574:1:41:0,-30.8249,-407.479 0/0:184:174,10:174:6995:10:395:0,-19.4846,-593.302 0/1:161:145,16:145:5842:16:633:-8.83697,0,-477.092 dDocent_Contig_12115 13 . T G 280.594 . AB=0.131868;ABP=217.246;AC=3;AF=0.25;AN=12;AO=26;CIGAR=1X;DP=271;DPB=271;DPRA=1.79661;EPP=59.4686;EPPR=532.85;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.846154;PAIREDR=0.922131;PAO=0;PQA=0;PQR=0;PRO=0;QA=1045;QR=9823;RO=244;RPL=0;RPP=59.4686;RPPR=532.85;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=244;SRP=532.85;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:43:39,4:39:1567:4:159:-1.74715,0,-128.32 0/0:30:28,2:28:1129:2:81:0,-1.34517,-94.2067 0/1:72:61,11:61:2462:11:444:-18.6416,0,-200.044 0/1:67:57,9:57:2298:9:361:-12.6009,0,-186.728 0/0:24:24,0:24:970:0:0:0,-7.22472,-87.5987 0/0:35:35,0:35:1397:0:0:0,-10.536,-125.984 dDocent_Contig_12116 14 . A C 333.68 . AB=0.182692;ABP=93.9616;AC=3;AF=0.25;AN=12;AO=24;CIGAR=1X;DP=247;DPB=247;DPRA=1.17222;EPP=55.1256;EPPR=485.077;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.416667;PAIREDR=0.536036;PAO=0;PQA=0;PQR=0;PRO=0;QA=965;QR=8903;RO=222;RPL=0;RPP=55.1256;RPPR=485.077;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=222;SRP=485.077;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:36,2:36:1451:2:78:0,-4.03636,-123.436 0/0:69:65,3:65:2623:3:123:0,-9.41471,-224.724 0/1:28:25,3:25:1001:3:123:-3.03595,0,-81.9553 0/1:41:34,7:34:1345:7:282:-13.4105,0,-108.971 0/1:35:26,9:26:1029:9:359:-22.1368,0,-82.3644 0/0:36:36,0:36:1454:0:0:0,-10.8371,-131.107 dDocent_Contig_12117 39 . A C 72.2408 . AB=0.15625;ABP=35.8538;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=146;DPB=146;DPRA=1.40351;EPP=13.8677;EPPR=309.188;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=0;PAIREDR=0.836879;PAO=0;PQA=0;PQR=0;PRO=0;QA=200;QR=5551;RO=141;RPL=0;RPP=13.8677;RPPR=309.188;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=141;SRP=309.188;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:869:0:0:0,-6.62266,-78.5207 0/0:24:24,0:24:944:0:0:0,-7.22472,-85.2589 0/0:20:20,0:20:794:0:0:0,-6.0206,-71.7775 0/1:32:27,5:27:1071:5:200:-8.74696,0,-87.0502 0/0:29:29,0:29:1148:0:0:0,-8.72987,-103.602 0/0:19:19,0:19:725:0:0:0,-5.71957,-65.57 dDocent_Contig_12118 107 . N C 129.76 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=128;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:60:-5.69918,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 dDocent_Contig_12119 54 . G A 2569.86 . AB=0.305677;ABP=78.1205;AC=5;AF=0.5;AN=10;AO=99;CIGAR=1X;DP=332;DPB=332;DPRA=0.871622;EPP=217.986;EPPR=508.963;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3667;QR=8972;RO=233;RPL=99;RPP=217.986;RPPR=508.963;RPR=0;RUN=1;SAF=99;SAP=217.986;SAR=0;SRF=233;SRP=508.963;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:18,10:18:694:10:354:-23.759,0,-54.3555 0/1:90:78,12:78:3039:12:459:-14.5534,0,-246.503 0/0:74:74,0:74:2856:0:0:0,-22.2762,-257.158 0/1:111:63,48:63:2383:48:1769:-126.023,0,-181.22 ./.:.:.:.:.:.:.:. 1/1:29:0,29:0:0:29:1085:-97.9516,-8.72987,0 dDocent_Contig_12121 76 . C G 41.1901 . AB=0.12766;ABP=59.6072;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=142;DPB=142;DPRA=2.47368;EPP=16.0391;EPPR=298.331;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.566176;PAO=0;PQA=0;PQR=0;PRO=0;QA=216;QR=4748;RO=136;RPL=3;RPP=3.0103;RPPR=13.8038;RPR=3;RUN=1;SAF=3;SAP=3.0103;SAR=3;SRF=81;SRP=13.8038;SRR=55;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:649:0:0:0,-5.71957,-58.7259 0/1:47:41,6:41:1463:6:216:-5.64185,0,-117.812 0/0:7:7,0:7:259:0:0:0,-2.10721,-23.6657 0/0:13:13,0:13:449:0:0:0,-3.91339,-40.7366 0/0:21:21,0:21:729:0:0:0,-6.32163,-65.9266 0/0:35:35,0:35:1199:0:0:0,-10.536,-108.208 dDocent_Contig_12122 124 . T C 629.405 . AB=0.227778;ABP=118.87;AC=2;AF=0.2;AN=10;AO=41;CIGAR=1X;DP=399;DPB=399;DPRA=1.23288;EPP=92.0407;EPPR=778.226;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1329;QR=11880;RO=357;RPL=0;RPP=92.0407;RPPR=778.226;RPR=41;RUN=1;SAF=0;SAP=92.0407;SAR=41;SRF=0;SRP=778.226;SRR=357;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:23,13:23:785:13:393:-24.8232,0,-60.1293 0/0:116:116,0:116:3919:0:0:0,-34.9195,-352.929 0/0:101:101,0:101:3260:0:0:0,-30.404,-293.629 0/1:144:115,28:115:3846:28:936:-41.4181,0,-303.239 ./.:.:.:.:.:.:.:. 0/0:2:2,0:2:70:0:0:0,-0.60206,-6.6474 dDocent_Contig_12123 18 . G T 2605.25 . AB=0.516667;ABP=3.44459;AC=6;AF=0.5;AN=12;AO=93;CIGAR=1X2M1X;DP=180;DPB=180;DPRA=0;EPP=204.957;EPPR=189.757;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.645161;PAIREDR=0.686047;PAO=0;PQA=0;PQR=0;PRO=0;QA=3600;QR=3406;RO=86;RPL=0;RPP=204.957;RPPR=189.757;RPR=93;RUN=1;SAF=93;SAP=204.957;SAR=0;SRF=86;SRP=189.757;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:37:20,17:20:794:17:658:-48.4177,0,-60.6388 0|1:30:12,18:12:482:18:685:-52.949,0,-34.7004 0|1:19:5,14:5:200:14:551:-44.2157,0,-12.6603 0|1:29:24,5:24:946:5:194:-9.10102,0,-76.7147 0|1:27:12,14:12:468:14:545:-41.1687,0,-34.2437 0|1:38:13,25:13:516:25:967:-75.8952,0,-35.3479 dDocent_Contig_12124 107 . N T 75.9564 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=75;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:41:-3.89396,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 dDocent_Contig_12125 20 . G A 158.556 . AB=0.1875;ABP=43.7254;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=89;DPB=89;DPRA=2.34146;EPP=22.5536;EPPR=176.728;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.775;PAO=0;PQA=0;PQR=0;PRO=0;QA=364;QR=3204;RO=80;RPL=0;RPP=22.5536;RPPR=176.728;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=80;SRP=176.728;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:483:0:0:0,-3.61236,-43.8218 0/0:22:22,0:22:881:0:0:0,-6.62266,-79.5959 0/1:33:27,6:27:1085:6:244:-12.4048,0,-88.0006 0/1:15:12,3:12:480:3:120:-6.67224,0,-39.0341 0/0:1:1,0:1:41:0:0:0,-0.30103,-4.09457 0/0:6:6,0:6:234:0:0:0,-1.80618,-21.4273 dDocent_Contig_12126 44 . C T 33.7347 . AB=0.5;ABP=3.0103;AC=5;AF=0.416667;AN=12;AO=21;CIGAR=1X;DP=64;DPB=64;DPRA=0;EPP=48.6112;EPPR=96.3836;GTI=0;LEN=1;MEANALT=1;MQM=7;MQMR=7;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=844;QR=1728;RO=43;RPL=0;RPP=48.6112;RPPR=96.3836;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=43;SRP=96.3836;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:11,5:11:447:5:201:0,-1.59728,-3.77927 1/1:4:1,3:1:41:3:122:-1.25972,-0.504258,0 0/0:16:14,2:14:565:2:79:0,-3.48687,-7.55807 0/1:4:2,2:2:82:2:78:-0.125452,0,-0.125617 1/1:12:5,7:5:193:7:283:-1.26045,-0.393831,0 0/0:12:10,2:10:400:2:81:0,-2.28266,-5.03866 dDocent_Contig_12127 76 . C T 1164.75 . AB=0.489796;ABP=3.09893;AC=3;AF=0.375;AN=8;AO=49;CIGAR=1X;DP=124;DPB=124;DPRA=0;EPP=109.412;EPPR=165.871;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1707;QR=2585;RO=75;RPL=49;RPP=109.412;RPPR=165.871;RPR=0;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=75;SRP=165.871;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:25,1:25:859:1:36:0,-4.2285,-74.023 0/1:40:30,10:30:1024:10:346:-19.4314,0,-80.4215 0/1:43:13,30:13:454:30:1040:-80.9626,0,-28.2471 0/1:15:7,8:7:248:8:285:-21.4787,0,-18.1487 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12129 9 . A G 425.774 . AB=0.555556;ABP=3.73412;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=67;DPB=67;DPRA=1.35;EPP=35.5824;EPPR=115.927;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=575;QR=1982;RO=52;RPL=0;RPP=35.5824;RPPR=115.927;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=52;SRP=115.927;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:2,14:2:76:14:536:-43.7686,0,-2.39819 0/0:15:15,0:15:555:0:0:0,-4.51545,-50.281 0/0:15:15,0:15:579:0:0:0,-4.51545,-52.4524 0/1:11:10,1:10:383:1:39:-0.585235,0,-31.5134 0/0:4:4,0:4:156:0:0:0,-1.20412,-14.4173 0/0:6:6,0:6:233:0:0:0,-1.80618,-21.3401 dDocent_Contig_12130 79 . G T 177.767 . AB=0.1;ABP=16.9077;AC=3;AF=0.3;AN=10;AO=6;CIGAR=1X;DP=87;DPB=87;DPRA=0.3125;EPP=16.0391;EPPR=178.9;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=226;QR=2951;RO=81;RPL=6;RPP=16.0391;RPPR=178.9;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=81;SRP=178.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:32,0:32:1155:0:0:0,-9.63296,-104.254 0/0:27:27,0:27:979:0:0:0,-8.12781,-88.4246 1/1:5:0,5:0:0:5:189:-17.3746,-1.50515,0 0/0:13:13,0:13:484:0:0:0,-3.91339,-43.9004 0/1:10:9,1:9:333:1:37:-0.687529,0,-27.3075 ./.:.:.:.:.:.:.:. dDocent_Contig_12132 19 . A T 74.9209 . AB=0.125;ABP=71.4117;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=368;DPB=368;DPRA=0.760274;EPP=31.2394;EPPR=773.883;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.230769;PAIREDR=0.391549;PAO=0;PQA=0;PQR=0;PRO=0;QA=505;QR=14115;RO=355;RPL=0;RPP=31.2394;RPPR=773.883;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=355;SRP=773.883;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:56:49,7:49:1942:7:280:-8.71351,0,-158.13 0/0:95:95,0:95:3801:0:0:0,-28.5978,-342.101 0/0:50:48,2:48:1896:2:67:0,-8.69182,-164.489 0/0:37:34,3:34:1340:3:117:0,-0.228823,-109.948 0/0:79:78,1:78:3105:1:41:0,-19.6868,-275.437 0/0:51:51,0:51:2031:0:0:0,-15.3525,-182.983 dDocent_Contig_12133 107 . N T 151.751 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=8.07091;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=165;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:165:-15.175,-1.50515,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12134 107 . N T 532.558 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=18;CIGAR=1X;DP=18;DPB=18;DPRA=0;EPP=42.0968;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=570;QR=0;RO=0;RPL=0;RPP=42.0968;RPPR=0;RPR=18;RUN=1;SAF=0;SAP=42.0968;SAR=18;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:82:-7.65163,-0.90309,0 1/1:7:0,7:0:0:7:234:-21.3878,-2.10721,0 1/1:7:0,7:0:0:7:219:-20.0181,-2.10721,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12136 158 . T C 2254.97 . AB=0.0470588;ABP=154.477;AC=0;AF=0;AN=10;AO=7;CIGAR=1X1M3X1M1X;DP=181;DPB=181;DPRA=1.04286;EPP=18.2106;EPPR=200.614;GTI=0;LEN=1;MEANALT=2.75;MQM=22.8571;MQMR=60;NS=5;NUMALT=2;ODDS=1.38778e-17;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=234;QR=3309;RO=91;RPL=0;RPP=18.2106;RPPR=200.614;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=200.614;SRR=91;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:37:16,1,18:16:589:1,18:29,674:-50.5017,-53.5725,-101.434,0,-46.5252,-42.852 0|0:35:3,0,32:3:111:0,32:0,1179:-96.0475,-96.9506,-106.032,-0.182235,-9.63296,0 .:.:.:.:.:.:.:. 0|0:48:16,3,28:16:572:3,28:96,1060:-82.2482,-81.8615,-127.588,0,-41.5697,-38.3402 0|0:16:15,1,0:15:569:1,0:37,0:0,-2.43764,-49.1733,-4.51545,-49.4744,-51.3055 0|0:45:41,2,0:41:1468:2,0:72,0:0,-9.36891,-128.608,-12.3422,-129.21,-132.182 dDocent_Contig_12137 71 . C A 150.245 . AB=0.230769;ABP=11.1951;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=5M1X2M;DP=85;DPB=85.25;DPRA=0.866667;EPP=9.52472;EPPR=152.842;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=114;QR=2538;RO=69;RPL=3;RPP=9.52472;RPPR=152.842;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=69;SRP=152.842;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:13:10,0,3,0:10:373:0,3,0:0,114,0:-6.71883,-9.72913,-40.2621,0,-30.9111,-30.008,-9.72913,-40.2621,-30.9111,-40.2621 0|0:25:23,0,0,0:23:813:0,0,0:0,0,0:0,-6.92369,-73.1384,-6.92369,-73.1384,-73.1384,-6.92369,-73.1384,-73.1384,-73.1384 0|0:13:11,0,0,2:11:408:0,0,2:0,0,78:-3.49008,-6.80141,-40.1682,-6.80141,-40.1682,-40.1682,0,-33.7535,-33.7535,-33.1515 0|0:5:5,0,0,0:5:188:0,0,0:0,0,0:0,-1.50515,-17.2842,-1.50515,-17.2842,-17.2842,-1.50515,-17.2842,-17.2842,-17.2842 0|0:15:9,2,0,4:9:343:2,0,4:82,0,143:-8.91589,-4.83962,-32.3913,-11.6252,-32.9934,-39.7663,0,-21.3407,-28.1141,-26.9099 0|0:14:11,0,0,2:11:413:0,0,2:0,0,78:-3.11367,-6.425,-40.2518,-6.425,-40.2518,-40.2518,0,-33.838,-33.838,-33.2359 dDocent_Contig_12138 67 . T C 304.226 . AB=0.24;ABP=47.0478;AC=3;AF=0.25;AN=12;AO=28;CIGAR=1X;DP=343;DPB=343;DPRA=1.39535;EPP=63.8115;EPPR=684.853;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=929;QR=8991;RO=314;RPL=28;RPP=63.8115;RPPR=684.853;RPR=0;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=314;SRP=684.853;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:43:43,0:43:1209:0:0:0,-12.9443,-109.075 0/1:10:5,5:5:145:5:161:-11.7974,0,-10.3274 0/1:35:25,10:25:692:10:356:-21.8443,0,-52.01 0/0:65:60,5:60:1706:5:155:0,-5.31494,-139.548 0/0:160:154,5:154:4481:5:154:0,-33.869,-389.378 0/1:30:27,3:27:758:3:103:-0.578793,0,-59.4588 dDocent_Contig_12139 12 . T A 1400.41 . AB=0.294686;ABP=78.802;AC=6;AF=0.5;AN=12;AO=61;CIGAR=1X2M1X;DP=207;DPB=207;DPRA=0;EPP=135.47;EPPR=315.702;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.57377;PAIREDR=0.597222;PAO=0;PQA=0;PQR=0;PRO=0;QA=2352;QR=5645;RO=144;RPL=0;RPP=135.47;RPPR=315.702;RPR=61;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=144;SRP=315.702;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:27:17,10:17:662:10:373:-25.7892,0,-51.7831 0|1:49:29,19:29:1140:19:744:-52.4309,0,-88.0338 0|1:36:28,8:28:1088:8:310:-17.4246,0,-87.3777 0|1:53:39,14:39:1540:14:551:-33.9812,0,-122.898 0|1:25:20,5:20:781:5:194:-10.3068,0,-63.0824 0|1:17:11,5:11:434:5:180:-11.3305,0,-34.1892 dDocent_Contig_12140 11 . C T 120.205 . AB=0.191489;ABP=41.8658;AC=4;AF=0.333333;AN=12;AO=14;CIGAR=1X1M1X2M1X;DP=129;DPB=129;DPRA=0;EPP=33.4109;EPPR=239.701;GTI=0;LEN=1;MEANALT=1.5;MQM=56.3571;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=0;PAIREDR=0.825688;PAO=0;PQA=0;PQR=0;PRO=0;QA=553;QR=4295;RO=109;RPL=0;RPP=33.4109;RPPR=239.701;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=109;SRP=239.701;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:20:16,4,0:16:641:4,0:153,0:-8.11852,0,-52.006,-12.935,-53.2101,-65.7593 0|0:63:54,4,4:54:2145:4,4:159,163:0,-3.59916,-178.975,-2.79992,-166.731,-178.191 0|0:19:18,1,0:18:696:1,0:40,0:0,-1.75276,-59.0019,-5.41854,-59.3029,-62.5725 0|1:17:14,2,0:14:543:2,0:79,0:-2.23662,0,-43.9994,-6.45104,-44.6014,-51.056 0|1:7:6,1,0:6:230:1,0:41,0:-1.98736,0,-18.9571,-3.79354,-19.2582,-22.646 0|1:3:1,2,0:1:40:2,0:81,0:-6.78264,0,-3.09259,-7.08367,-3.69465,-10.3771 dDocent_Contig_12144 23 . G A 163.678 . AB=0.5;ABP=3.0103;AC=2;AF=0.166667;AN=12;AO=5;CIGAR=1X4M;DP=64;DPB=64;DPRA=1.36111;EPP=13.8677;EPPR=115.927;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=202;QR=2046;RO=52;RPL=0;RPP=13.8677;RPPR=115.927;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=52;SRP=115.927;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:17:16,0,1:16:627:0,1:0,41:0,-4.81648,-56.3587,-1.02294,-52.9735,-52.6725 0|0:15:13,1,1:13:505:1,1:40,40:0,-1.006,-42.1859,-0.597904,-39.1911,-41.8157 0|0:9:9,0,0:9:360:0,0:0,0:0,-2.70927,-32.7642,-2.70927,-32.7642,-32.7642 0|0:13:11,0,1:11:438:0,1:0,40:0,-3.31133,-39.3751,-0.0162487,-36.0799,-35.7789 0|1:6:2,4,0:2:79:4,0:162,0:-13.1608,0,-5.69106,-13.7628,-6.89518,-20.2601 0|1:4:1,0,2:1:37:0,2:0,81:-6.40143,-6.70246,-9.7237,0,-3.02712,-2.42506 dDocent_Contig_12145 7 . C T 67.1823 . AB=0.266667;ABP=10.1038;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=141;DPB=141;DPRA=0.595238;EPP=11.6962;EPPR=300.502;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=8.67362e-19;PAIRED=0;PAIREDR=0.729927;PAO=0;PQA=0;PQR=0;PRO=0;QA=138;QR=5257;RO=137;RPL=0;RPP=11.6962;RPPR=300.502;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=137;SRP=300.502;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:658:0:0:0,-5.11751,-59.5571 0/0:47:47,0:47:1789:0:0:0,-14.1484,-161.261 0/0:22:22,0:22:851:0:0:0,-6.62266,-76.9128 0/0:32:32,0:32:1223:0:0:0,-9.63296,-110.366 0/0:8:8,0:8:310:0:0:0,-2.40824,-28.2637 0/1:15:11,4:11:426:4:138:-8.24111,0,-34.1793 dDocent_Contig_12146 22 . T C 832.197 . AB=0.289474;ABP=46.8969;AC=1;AF=0.0833333;AN=12;AO=35;CIGAR=1X;DP=838;DPB=838;DPRA=0.651899;EPP=79.0118;EPPR=1746.7;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1370;QR=30338;RO=803;RPL=0;RPP=79.0118;RPPR=1746.7;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=803;SRP=1746.7;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:144:144,0:144:5418:0:0:0,-43.3483,-487.594 0/1:114:81,33:81:3079:33:1320:-84.7426,0,-242.929 0/0:150:150,0:150:5620:0:0:0,-45.1545,-505.773 0/0:92:90,2:90:3361:2:50:0,-22.9489,-297.866 0/0:177:177,0:177:6645:0:0:0,-53.2823,-597.921 0/0:161:161,0:161:6215:0:0:0,-48.4658,-559.224 dDocent_Contig_12147 98 . N G 66.2234 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=65;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:36:-3.41967,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12148 12 . A T 57.7569 . AB=0.105023;ABP=299.768;AC=4;AF=0.333333;AN=12;AO=27;CIGAR=1X;DP=342;DPB=342;DPRA=0;EPP=61.6401;EPPR=687.024;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.996825;PAO=0;PQA=0;PQR=0;PRO=0;QA=991;QR=12544;RO=315;RPL=0;RPP=61.6401;RPPR=687.024;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=315;SRP=687.024;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:67:64,3:64:2554:3:111:0,-9.81509,-219.639 0/1:82:74,8:74:2973:8:296:-2.30969,0,-242.976 0/0:56:55,1:55:2183:1:35:0,-13.359,-193.148 0/1:52:47,5:47:1859:5:183:-1.17319,0,-151.865 0/1:29:26,3:26:1039:3:109:-1.43813,0,-85.0709 0/1:56:49,7:49:1936:7:257:-6.6263,0,-157.587 dDocent_Contig_12149 8 . C T 37.7346 . AB=0.25;ABP=7.35324;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=1X;DP=93;DPB=93;DPRA=0.470588;EPP=7.35324;EPPR=200.614;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.483516;PAO=0;PQA=0;PQR=0;PRO=0;QA=78;QR=3487;RO=91;RPL=0;RPP=7.35324;RPPR=200.614;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=91;SRP=200.614;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:8:6,2:6:232:2:78:-4.99523,0,-18.8407 0/0:23:23,0:23:879:0:0:0,-6.92369,-79.425 0/0:17:17,0:17:645:0:0:0,-5.11751,-58.3818 0/0:12:12,0:12:450:0:0:0,-3.61236,-40.8451 0/0:9:9,0:9:347:0:0:0,-2.70927,-31.5893 0/0:24:24,0:24:934:0:0:0,-7.22472,-84.3759 dDocent_Contig_12151 50 . C T 77.0919 . AB=0.25;ABP=11.6962;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=135;DPB=135;DPRA=0.672269;EPP=11.6962;EPPR=278.854;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=8.67362e-19;PAIRED=1;PAIREDR=0.931298;PAO=0;PQA=0;PQR=0;PRO=0;QA=152;QR=5009;RO=131;RPL=4;RPP=11.6962;RPPR=270.367;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=128;SRP=262.012;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:5:5,0:5:181:0:0:0,-1.50515,-16.6398 0/1:16:12,4:12:466:4:152:-9.23204,0,-37.4648 0/0:22:22,0:22:856:0:0:0,-6.62266,-77.3564 0/0:10:10,0:10:404:0:0:0,-3.0103,-36.7204 0/0:53:53,0:53:1971:0:0:0,-15.9546,-177.591 0/0:29:29,0:29:1131:0:0:0,-8.72987,-102.079 dDocent_Contig_12154 30 . G A 473.499 . AB=0.327586;ABP=17.986;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X;DP=215;DPB=215;DPRA=0.762295;EPP=50.7827;EPPR=422.104;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=860;QR=7727;RO=193;RPL=0;RPP=50.7827;RPPR=422.104;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=193;SRP=422.104;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:51:51,0:51:2004:0:0:0,-15.3525,-180.552 0/0:57:57,0:57:2288:0:0:0,-17.1587,-206.079 0/0:14:14,0:14:568:0:0:0,-4.21442,-51.4617 0/0:35:32,3:32:1294:3:112:0,-0.0899692,-106.277 0/1:33:24,9:24:969:9:342:-21.1969,0,-77.5727 0/1:25:15,10:15:604:10:406:-29.3743,0,-47.1714 dDocent_Contig_12155 54 . A C 656.332 . AB=0.103175;ABP=175.349;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=16M1X8M;DP=209;DPB=166.68;DPRA=1.35484;EPP=31.2394;EPPR=320.045;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.692308;PAIREDR=0.609589;PAO=0;PQA=0;PQR=0;PRO=0;QA=525;QR=5704;RO=146;RPL=13;RPP=31.2394;RPPR=320.045;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=146;SRP=320.045;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:31:27,3,0,0:27:1057:3,0,0:104,0,0:0,-2.943,-88.9736,-8.12781,-89.8766,-95.1512,-8.12781,-89.8766,-95.1512,-95.1512 0|0:57:38,17,2,0:38:1478:17,2,0:531,82,0:-22.9779,0,-116.322,-27.6331,-114.671,-148.58,-34.417,-121.44,-149.182,-155.952 0|0:22:15,7,0,0:15:587:7,0,0:209,0,0:-6.28975,0,-46.5494,-10.8052,-48.6566,-59.1999,-10.8052,-48.6566,-59.1999,-59.1999 0|0:30:27,3,0,0:27:1048:3,0,0:104,0,0:-0.671429,0,-85.5933,-8.79924,-86.4964,-94.945,-8.79924,-86.4964,-94.945,-94.945 0|0:37:25,8,1,2:25:984:8,1,2:285,41,82:-14.6084,0,-78.5949,-18.7435,-77.6182,-99.4344,-15.3515,-74.2331,-92.9651,-95.7482 0|1:32:14,8,10,0:14:550:8,10,0:255,402,0:-28.9756,-14.7496,-57.5733,0,-26.8495,-42.292,-33.1901,-59.9815,-45.3023,-78.445 dDocent_Contig_12156 7 . C A 10808.6 . AB=0.09375;ABP=48.8827;AC=0;AF=0;AN=12;AO=3;CIGAR=2X1M1X1M;DP=559;DPB=559;DPRA=0;EPP=9.52472;EPPR=309.248;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.986207;PAO=0;PQA=0;PQR=0;PRO=0;QA=117;QR=5547;RO=145;RPL=0;RPP=9.52472;RPPR=317.874;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=144;SRP=309.248;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:103:32,0,7,64:32:1209:0,7,64:0,280,2570:-202.13,-211.763,-310.852,-188.699,-287.788,-285.68,0,-99.0784,-76.01,-79.8125 0|0:170:56,0,7,106:56:2177:0,7,106:0,283,4209:-329.605,-346.463,-525.364,-323.13,-502.031,-499.924,0,-178.892,-155.558,-146.982 0|0:67:21,0,29,17:21:798:0,29,17:0,1159,677:-89.1419,-95.4635,-160.898,0,-65.4307,-56.7009,-39.7223,-105.155,-9.68082,-100.037 0|0:123:24,0,37,61:24:911:0,37,61:0,1446,2420:-236.146,-243.371,-318.071,-124.504,-199.202,-188.064,-44.1766,-118.875,0,-100.512 0|0:32:5,3,3,21:5:186:3,3,21:117,118,844:-68.0535,-59.9422,-74.258,-59.8539,-65.4558,-74.1697,0,-5.59451,-5.50534,-8.89323 0|0:64:7,0,5,51:7:266:0,5,51:0,195,2052:-167.008,-169.116,-190.928,-153.09,-174.901,-173.396,0,-21.8082,-5.77824,-6.45564 dDocent_Contig_12157 19 . G A 857.477 . AB=0.162896;ABP=221.15;AC=4;AF=0.333333;AN=12;AO=36;CIGAR=1X5M;DP=258;DPB=263.833;DPRA=1.19459;EPP=81.1833;EPPR=448.162;GTI=0;LEN=1;MEANALT=1.8;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=1.38778e-17;PAIRED=0.944444;PAIREDR=0.873171;PAO=0;PQA=0;PQR=0;PRO=0;QA=1448;QR=8054;RO=205;RPL=0;RPP=81.1833;RPPR=448.162;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=205;SRP=448.162;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:47:39,5,0,3:39:1528:5,0,3:197,0,123:-4.45756,0,-124.121,-16.1977,-125.626,-141.834,-6.03955,-115.472,-131.68,-130.777 0|1:57:48,1,0,8:48:1907:1,0,8:41,0,314:-11.3581,-22.4216,-179.124,-25.8076,-179.425,-182.809,0,-153.603,-156.987,-154.579 0|1:39:27,1,0,11:27:1059:1,0,11:40,0,443:-28.3868,-33.2197,-119.992,-36.5146,-120.293,-123.588,0,-83.7777,-87.073,-83.7617 0|1:33:21,0,0,12:21:822:0,0,12:0,0,486:-34.1573,-40.4789,-108.057,-40.4789,-108.057,-108.057,0,-67.9775,-67.9775,-64.3651 0|0:45:34,0,9,2:34:1317:0,9,2:0,329,82:-16.6096,-26.8446,-135.033,0,-108.156,-105.447,-20.0684,-128.263,-101.387,-127.661 0|0:37:36,0,0,0:36:1421:0,0,0:0,0,0:0,-10.8371,-127.745,-10.8371,-127.745,-127.745,-10.8371,-127.745,-127.745,-127.745 dDocent_Contig_12158 73 . C T 92.9425 . AB=0.217391;ABP=18.9659;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=2X;DP=171;DPB=171;DPRA=0.777027;EPP=13.8677;EPPR=329.568;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.819277;PAO=0;PQA=0;PQR=0;PRO=0;QA=193;QR=6405;RO=166;RPL=5;RPP=13.8677;RPPR=363.475;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=162;SRP=329.568;SRR=4;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:29:29,0:29:1105:0:0:0,-8.72987,-99.7416 0|1:23:18,5:18:701:5:193:-10.8171,0,-56.4968 0|0:34:34,0:34:1321:0:0:0,-10.235,-119.162 0|0:17:17,0:17:656:0:0:0,-5.11751,-59.3689 0|0:38:38,0:38:1460:0:0:0,-11.4391,-131.665 0|0:30:30,0:30:1162:0:0:0,-9.0309,-104.873 dDocent_Contig_12159 36 . T G 31.0838 . AB=0.157895;ABP=22.325;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=120;DPB=120;DPRA=2.21053;EPP=11.6962;EPPR=252.73;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0.573913;PAO=0;PQA=0;PQR=0;PRO=0;QA=152;QR=4113;RO=115;RPL=0;RPP=11.6962;RPPR=252.73;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=115;SRP=252.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:563:0:0:0,-4.81648,-50.9946 0/0:44:43,1:43:1543:1:41:0,-9.15075,-135.055 0/1:19:16,3:16:556:3:111:-4.63092,0,-44.6412 0/0:12:12,0:12:442:0:0:0,-3.61236,-40.1205 0/0:11:10,0:10:353:0:0:0,-3.0103,-31.9933 0/0:18:18,0:18:656:0:0:0,-5.41854,-59.3673 dDocent_Contig_12160 62 . G A 1043.27 . AB=0.457831;ABP=4.29225;AC=4;AF=0.333333;AN=12;AO=38;CIGAR=7M1X;DP=112;DPB=109;DPRA=1.43103;EPP=85.5263;EPPR=150.67;GTI=0;LEN=1;MEANALT=1.75;MQM=59.6316;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.0526316;PAIREDR=0.985294;PAO=0;PQA=0;PQR=0;PRO=0;QA=1491;QR=2638;RO=68;RPL=38;RPP=85.5263;RPPR=150.67;RPR=0;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=68;SRP=150.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:20:19,1,0:19:730:1,0:38,0:0,-2.22333,-62.227,-5.71957,-62.528,-65.6443 0|1:17:15,0,2:15:586:0,2:0,79:-2.38012,-6.89557,-55.0673,0,-48.5658,-47.9638 0|1:28:18,3,6:18:697:3,6:116,242:-14.5377,-10.4328,-66.775,0,-47.7261,-55.448 0|0:9:9,0,0:9:352:0,0:0,0:0,-2.70927,-32.0416,-2.70927,-32.0416,-32.0416 0|1:30:3,0,27:3:117:0,27:0,1050:-85.7519,-86.655,-96.2726,0,-10.0071,-1.87931 0|1:8:4,0,3:4:156:0,3:0,120:-8.68054,-9.88466,-22.7028,0,-12.8151,-11.912 dDocent_Contig_12161 9 . T C 4214.11 . AB=0.565891;ABP=12.7398;AC=6;AF=0.5;AN=12;AO=146;CIGAR=1X;DP=258;DPB=258;DPRA=0;EPP=320.045;EPPR=246.215;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.979452;PAIREDR=0.910714;PAO=0;PQA=0;PQR=0;PRO=0;QA=5649;QR=4265;RO=112;RPL=0;RPP=320.045;RPPR=246.215;RPR=146;RUN=1;SAF=146;SAP=320.045;SAR=0;SRF=112;SRP=246.215;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:21,20:21:797:20:775:-57.7356,0,-59.7118 0/1:49:27,22:27:1035:22:840:-61.171,0,-78.7055 0/1:48:14,34:14:541:34:1321:-104.727,0,-34.5859 0/1:48:18,30:18:667:30:1170:-91.1475,0,-45.9086 0/1:34:17,17:17:645:17:658:-49.3216,0,-48.1492 0/1:38:15,23:15:580:23:885:-68.5304,0,-41.1037 dDocent_Contig_12162 128 . A G 1001.3 . AB=0.335938;ABP=32.9359;AC=7;AF=0.583333;AN=12;AO=44;CIGAR=1X;DP=129;DPB=129;DPRA=0;EPP=98.5551;EPPR=187.585;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.988235;PAO=0;PQA=0;PQR=0;PRO=0;QA=1619;QR=2957;RO=85;RPL=0;RPP=98.5551;RPPR=187.585;RPR=44;RUN=1;SAF=0;SAP=98.5551;SAR=44;SRF=0;SRP=187.585;SRR=85;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:12,19:12:424:19:703:-54.2707,0,-29.164 0/1:27:19,8:19:650:8:289:-18.2292,0,-50.6858 0/1:43:32,11:32:1130:11:407:-24.034,0,-89.0598 0/1:24:21,3:21:723:3:110:-3.03628,0,-58.1596 0/1:3:1,2:1:30:2:74:-6.12279,0,-2.09648 1/1:1:0,1:0:0:1:36:-3.59827,-0.30103,0 dDocent_Contig_12163 37 . C T 202.872 . AB=0.294118;ABP=15.5282;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=173;DPB=173;DPRA=1.26415;EPP=26.8965;EPPR=354.789;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.909091;PAIREDR=0.950617;PAO=0;PQA=0;PQR=0;PRO=0;QA=388;QR=6345;RO=162;RPL=0;RPP=26.8965;RPPR=354.789;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=162;SRP=354.789;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:24,10:24:925:10:349:-21.5091,0,-73.307 0/0:33:32,1:32:1266:1:39:0,-6.03743,-110.309 0/0:39:39,0:39:1500:0:0:0,-11.7402,-135.246 0/0:49:49,0:49:1935:0:0:0,-14.7505,-174.354 0/0:12:12,0:12:477:0:0:0,-3.61236,-43.2781 0/0:6:6,0:6:242:0:0:0,-1.80618,-22.1569 dDocent_Contig_12164 13 . C G 2455.84 . AB=0.444444;ABP=8.31834;AC=6;AF=0.5;AN=12;AO=88;CIGAR=1M1I1X;DP=198;DPB=242;DPRA=0;EPP=194.1;EPPR=241.872;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990909;PAO=0;PQA=0;PQR=0;PRO=0;QA=3493;QR=4404;RO=110;RPL=0;RPP=194.1;RPPR=241.872;RPR=88;RUN=1;SAF=88;SAP=194.1;SAR=0;SRF=110;SRP=241.872;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:43:28,15:28:1115:15:590:-40.4943,0,-87.6907 0|1:49:24,25:24:965:25:985:-74.2001,0,-72.3997 0|1:13:5,8:5:198:8:316:-24.8917,0,-14.2837 0|1:27:9,18:9:365:18:717:-56.7265,0,-25.0872 0|1:34:28,6:28:1120:6:242:-11.9219,0,-90.8455 0|1:32:16,16:16:641:16:643:-48.5711,0,-48.3924 dDocent_Contig_12165 50 . C G 872.13 . AB=0.161616;ABP=101.472;AC=5;AF=0.416667;AN=12;AO=17;CIGAR=1X3M1X1M;DP=119;DPB=112;DPRA=2.63158;EPP=39.9253;EPPR=157.185;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.971831;PAO=0;PQA=0;PQR=0;PRO=0;QA=617;QR=2777;RO=71;RPL=17;RPP=39.9253;RPPR=157.185;RPR=0;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=71;SRP=157.185;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:21:10,0,9,2:10:398:0,9,2:0,331,70:-24.0664,-27.0767,-59.8632,0,-32.8119,-30.1026,-21.4205,-54.2068,-27.1604,-53.6048 0|1:33:18,9,4,2:18:698:9,4,2:342,142,70:-22.645,0,-54.6613,-16.4988,-45.8055,-72.6477,-22.371,-51.6777,-68.1588,-79.1227 0|1:45:30,12,3,0:30:1165:12,3,0:434,111,0:-26.3842,0,-92.1206,-26.3324,-86.6536,-121.165,-35.4151,-95.733,-122.068,-131.148 0|0:5:0,0,0,5:0:0:0,0,5:0,0,175:-16.0389,-16.0389,-16.0389,-16.0389,-16.0389,-16.0389,-1.50515,-1.50515,-1.50515,0 0|0:14:13,0,0,0:13:516:0,0,0:0,0,0:0,-3.91339,-46.3878,-3.91339,-46.3878,-46.3878,-3.91339,-46.3878,-46.3878,-46.3878 1|1:1:0,0,1,0:0:0:0,1,0:0,33,0:-3.29913,-3.29913,-3.29913,-0.30103,-0.30103,0,-3.29913,-3.29913,-0.30103,-3.29913 dDocent_Contig_12168 120 . C A 1952.58 . AB=0;ABP=0;AC=4;AF=0.333333;AN=12;AO=62;CIGAR=1X;DP=184;DPB=184;DPRA=1.01639;EPP=137.642;EPPR=267.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2154;QR=4209;RO=122;RPL=0;RPP=137.642;RPPR=267.93;RPR=62;RUN=1;SAF=0;SAP=137.642;SAR=62;SRF=0;SRP=267.93;SRR=122;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:54,0:54:1864:0:0:0,-16.2556,-168.044 0/0:23:23,0:23:785:0:0:0,-6.92369,-70.9664 0/0:21:21,0:21:728:0:0:0,-6.32163,-65.8423 0/0:24:24,0:24:832:0:0:0,-7.22472,-75.1987 1/1:50:0,50:0:0:50:1739:-156.798,-15.0515,0 1/1:12:0,12:0:0:12:415:-37.6819,-3.61236,0 dDocent_Contig_12170 30 . C T 459.984 . AB=0.325581;ABP=14.3727;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=10M1X1M;DP=150;DPB=149.5;DPRA=1.65385;EPP=33.4109;EPPR=274.444;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=569;QR=4892;RO=125;RPL=0;RPP=33.4109;RPPR=274.444;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=125;SRP=274.444;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:14:12,1,0:12:470:1,0:38,0:0,-0.510713,-38.8388,-3.61236,-39.1398,-42.2554 0|1:43:29,0,14:29:1117:0,14:0,569:-38.6078,-47.3376,-139.031,0,-92.0928,-87.8784 0|0:44:42,0,0:42:1664:0,0:0,0:0,-12.6433,-149.774,-12.6433,-149.774,-149.774 0|0:17:13,3,0:13:512:3,0:118,0:-5.78091,0,-41.2039,-9.6943,-42.107,-51.8133 0|0:12:9,3,0:9:356:3,0:112,0:-6.83136,0,-28.79,-9.54063,-29.693,-38.8551 0|0:20:20,0,0:20:773:0,0:0,0:0,-6.0206,-69.8944,-6.0206,-69.8944,-69.8944 dDocent_Contig_12171 85 . T C 131.876 . AB=0.190476;ABP=37.9607;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=199;DPB=199;DPRA=1.33758;EPP=20.3821;EPPR=417.762;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.5;PAIREDR=0.612565;PAO=0;PQA=0;PQR=0;PRO=0;QA=300;QR=7240;RO=191;RPL=4;RPP=3.0103;RPPR=7.1145;RPR=4;RUN=1;SAF=4;SAP=3.0103;SAR=4;SRF=86;SRP=7.1145;SRR=105;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1256:0:0:0,-9.93399,-113.321 0/0:49:49,0:49:1807:0:0:0,-14.7505,-162.872 0/0:17:17,0:17:660:0:0:0,-5.11751,-59.7308 0/1:42:34,8:34:1301:8:300:-14.7105,0,-104.723 0/0:44:44,0:44:1682:0:0:0,-13.2453,-151.627 0/0:14:14,0:14:534:0:0:0,-4.21442,-48.3995 dDocent_Contig_12172 67 . A G 77.2544 . AB=0.104;ABP=173.271;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=519;DPB=519;DPRA=1.47157;EPP=39.9253;EPPR=1093.09;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.89243;PAO=0;PQA=0;PQR=0;PRO=0;QA=677;QR=19654;RO=502;RPL=17;RPP=39.9253;RPPR=1093.09;RPR=0;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=502;SRP=1093.09;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:60:60,0:60:2381:0:0:0,-18.0618,-214.455 0/0:124:124,0:124:4848:0:0:0,-37.3277,-436.235 0/0:56:56,0:56:2216:0:0:0,-16.8577,-199.612 0/1:125:112,13:112:4363:13:517:-9.24832,0,-355.018 0/0:59:59,0:59:2297:0:0:0,-17.7608,-206.908 0/0:95:91,4:91:3549:4:160:0,-13.8144,-304.676 dDocent_Contig_12173 28 . C G 4561.21 . AB=0.411168;ABP=30.0159;AC=2;AF=0.166667;AN=12;AO=168;CIGAR=1X;DP=773;DPB=773;DPRA=1.18043;EPP=367.818;EPPR=582.073;GTI=0;LEN=1;MEANALT=1.25;MQM=59.2619;MQMR=50.1128;NS=6;NUMALT=1;ODDS=0;PAIRED=0.994048;PAIREDR=0.761194;PAO=0;PQA=0;PQR=0;PRO=0;QA=6690;QR=23733;RO=603;RPL=0;RPP=367.818;RPPR=1312.41;RPR=168;RUN=1;SAF=168;SAP=367.818;SAR=0;SRF=502;SRP=582.073;SRR=101;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:52:51,1:51:1994:1:39:0,-11.757,-157.343 0/0:97:92,5:92:3646:5:200:0,-10.8466,-280.915 0/0:80:80,0:80:3117:0:0:0,-24.0824,-214.155 0/0:150:150,0:150:5885:0:0:0,-45.1545,-473.036 0/1:213:108,103:108:4263:103:4119:-306.709,0,-308.434 0/1:181:122,59:122:4828:59:2332:-152.634,0,-345.622 dDocent_Contig_12174 40 . A G 225.055 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=2;CIGAR=1M1X1M;DP=128;DPB=123.333;DPRA=0.8;EPP=7.35324;EPPR=233.186;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0.603774;PAO=0;PQA=0;PQR=0;PRO=0;QA=74;QR=3769;RO=106;RPL=0;RPP=7.35324;RPPR=233.186;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=233.186;SRR=106;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:17:13,4,0,0:13:466:4,0,0:133,0,0:-7.18141,0,-37.1609,-11.0948,-38.365,-49.1213,-11.0948,-38.365,-49.1213,-49.1213 0|0:35:33,2,0,0:33:1171:2,0,0:42,0,0:0,-6.54709,-101.708,-9.93399,-102.31,-105.478,-9.93399,-102.31,-105.478,-105.478 0|0:19:14,5,0,0:14:496:5,0,0:178,0,0:-10.6489,0,-39.2547,-14.8633,-40.7599,-55.2678,-14.8633,-40.7599,-55.2678,-55.2678 0|0:28:23,3,2,0:23:822:3,2,0:65,74,0:0,-2.06931,-68.1749,-0.808401,-63.0229,-67.3509,-6.92369,-69.078,-67.953,-74.0091 0|0:14:12,0,0,2:12:428:0,0,2:0,0,74:-2.81146,-6.42382,-41.3023,-6.42382,-41.3023,-41.3023,0,-35.2464,-35.2464,-34.6443 0|0:15:11,0,0,4:11:386:0,0,4:0,0,147:-9.07443,-12.3858,-43.787,-12.3858,-43.787,-43.787,0,-31.7641,-31.7641,-30.56 dDocent_Contig_12178 23 . T C 33.1496 . AB=0.285714;ABP=5.80219;AC=1;AF=0.1;AN=10;AO=2;CIGAR=1X;DP=298;DPB=298;DPRA=0.0962199;EPP=7.35324;EPPR=645.766;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=74;QR=11655;RO=296;RPL=0;RPP=7.35324;RPPR=645.766;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=296;SRP=645.766;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:92:92,0:92:3617:0:0:0,-27.6948,-325.584 0/0:33:33,0:33:1292:0:0:0,-9.93399,-116.552 0/0:51:51,0:51:2028:0:0:0,-15.3525,-182.719 0/0:115:115,0:115:4517:0:0:0,-34.6184,-406.503 ./.:.:.:.:.:.:.:. 0/1:7:5,2:5:201:2:74:-4.91681,0,-16.3635 dDocent_Contig_12179 36 . G C 36.6575 . AB=0.0957447;ABP=136.44;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=462;DPB=462;DPRA=1.44444;EPP=37.7539;EPPR=971.487;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.875;PAIREDR=0.966368;PAO=0;PQA=0;PQR=0;PRO=0;QA=647;QR=17697;RO=446;RPL=0;RPP=37.7539;RPPR=971.487;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=446;SRP=971.487;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:87:83,4:83:3288:4:158:0,-11.5893,-281.386 0/1:94:85,9:85:3410:9:368:-5.18853,0,-278.64 0/0:61:61,0:61:2416:0:0:0,-18.3628,-217.575 0/0:92:89,3:89:3539:3:121:0,-16.4146,-307.266 0/0:58:58,0:58:2278:0:0:0,-17.4597,-205.177 0/0:70:70,0:70:2766:0:0:0,-21.0721,-249.059 dDocent_Contig_12180 10 . G C 810.302 . AB=0.263566;ABP=65.6463;AC=3;AF=0.25;AN=12;AO=37;CIGAR=1X;DP=320;DPB=320;DPRA=0.741176;EPP=83.3548;EPPR=617.537;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8587;NS=6;NUMALT=1;ODDS=0;PAIRED=0.945946;PAIREDR=0.939929;PAO=0;PQA=0;PQR=0;PRO=0;QA=1500;QR=11020;RO=283;RPL=0;RPP=83.3548;RPPR=617.537;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=283;SRP=617.537;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:62:48,14:48:1874:14:570:-32.9777,0,-150.214 0/0:102:100,2:100:3904:2:81:0,-23.0193,-343.381 0/0:68:68,0:68:2686:0:0:0,-20.47,-241.598 0/1:41:27,14:27:1032:14:562:-38.5809,0,-80.8328 0/0:21:20,1:20:745:1:41:0,-2.22706,-63.266 0/1:26:20,6:20:779:6:246:-14.6933,0,-62.5985 dDocent_Contig_12182 28 . G A 109.551 . AB=0.263158;ABP=12.2676;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=149;DPB=149;DPRA=1.48333;EPP=20.3821;EPPR=309.188;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.765957;PAO=0;PQA=0;PQR=0;PRO=0;QA=314;QR=5381;RO=141;RPL=0;RPP=20.3821;RPPR=309.188;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=141;SRP=309.188;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:854:0:0:0,-6.62266,-77.1787 0/0:41:39,2:39:1473:2:78:0,-4.93893,-125.422 0/0:14:14,0:14:549:0:0:0,-4.21442,-49.7549 0/0:24:24,0:24:910:0:0:0,-7.22472,-82.2042 0/0:29:28,1:28:1048:1:38:0,-4.9326,-90.8218 0/1:19:14,5:14:547:5:198:-12.478,0,-43.8545 dDocent_Contig_12184 28 . A G 66.5753 . AB=0.136364;ABP=53.5464;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=169;DPB=169;DPRA=1.76;EPP=16.0391;EPPR=356.96;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0;PAIREDR=0.760736;PAO=0;PQA=0;PQR=0;PRO=0;QA=234;QR=6482;RO=163;RPL=0;RPP=16.0391;RPPR=356.96;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=163;SRP=356.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:31,0:31:1233:0:0:0,-9.33193,-111.244 0/1:44:38,6:38:1530:6:234:-8.1804,0,-124.69 0/0:26:26,0:26:1056:0:0:0,-7.82678,-95.3281 0/0:40:40,0:40:1572:0:0:0,-12.0412,-141.716 0/0:20:20,0:20:781:0:0:0,-6.0206,-70.5968 0/0:8:8,0:8:310:0:0:0,-2.40824,-28.2575 dDocent_Contig_12185 91 . C A 687.173 . AB=0.219388;ABP=137.065;AC=4;AF=0.333333;AN=12;AO=43;CIGAR=1X;DP=220;DPB=220;DPRA=4.08333;EPP=96.3836;EPPR=385.189;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.976744;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1485;QR=5944;RO=176;RPL=43;RPP=96.3836;RPPR=385.189;RPR=0;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=176;SRP=385.189;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:24,7:24:805:7:242:-12.7857,0,-63.4286 0/1:50:44,6:44:1505:6:210:-4.19096,0,-120.693 0/0:12:12,0:12:418:0:0:0,-3.61236,-37.9539 0/1:51:45,6:45:1485:6:209:-3.79852,0,-118.581 0/0:12:12,0:12:382:0:0:0,-3.61236,-34.6872 0/1:64:39,24:39:1349:24:824:-55.1623,0,-102.397 dDocent_Contig_12186 19 . T C 4443.28 . AB=0.563707;ABP=12.1405;AC=2;AF=0.166667;AN=12;AO=146;CIGAR=1X;DP=991;DPB=991;DPRA=0.70765;EPP=320.045;EPPR=1837.9;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.993151;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5837;QR=31632;RO=845;RPL=0;RPP=320.045;RPPR=1837.9;RPR=146;RUN=1;SAF=146;SAP=320.045;SAR=0;SRF=845;SRP=1837.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:70:70,0:70:2667:0:0:0,-21.0721,-240.218 0/1:138:45,93:45:1713:93:3718:-293.084,0,-112.88 0/1:121:68,53:68:2537:53:2119:-154.465,0,-192.094 0/0:45:45,0:45:1710:0:0:0,-13.5463,-154.147 0/0:326:326,0:326:12133:0:0:0,-98.1358,-1091.51 0/0:291:291,0:291:10872:0:0:0,-87.5997,-978.094 dDocent_Contig_12188 15 . C A 54.5401 . AB=0.173913;ABP=24.253;AC=2;AF=0.166667;AN=12;AO=5;CIGAR=1X;DP=75;DPB=75;DPRA=1.02703;EPP=13.8677;EPPR=155.013;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=190;QR=2775;RO=70;RPL=0;RPP=13.8677;RPPR=155.013;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=70;SRP=155.013;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:9:8,1:8:323:1:34:-0.689641,0,-26.7299 0/1:14:11,3:11:408:3:120:-6.97327,0,-32.8405 0/0:15:14,1:14:562:1:36:0,-0.917175,-47.3238 0/0:9:9,0:9:354:0:0:0,-2.70927,-32.2155 0/0:17:17,0:17:685:0:0:0,-5.11751,-61.9795 0/0:11:11,0:11:443:0:0:0,-3.31133,-40.2259 dDocent_Contig_12189 8 . A G 224.707 . AB=0.125;ABP=22.5536;AC=3;AF=0.3;AN=10;AO=8;CIGAR=1X;DP=52;DPB=52;DPRA=1.1;EPP=20.3821;EPPR=98.5551;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=309;QR=1673;RO=44;RPL=0;RPP=20.3821;RPPR=98.5551;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=44;SRP=98.5551;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:14,2:14:528:2:76:-2.39819,0,-43.0431 0/0:8:8,0:8:306:0:0:0,-2.40824,-27.9005 0/0:5:5,0:5:192:0:0:0,-1.50515,-17.65 0/0:17:17,0:17:647:0:0:0,-5.11751,-58.5646 1/1:6:0,6:0:0:6:233:-21.3401,-1.80618,0 ./.:.:.:.:.:.:.:. dDocent_Contig_12190 59 . T C 639.502 . AB=0;ABP=0;AC=2;AF=0.2;AN=10;AO=20;CIGAR=1X3M1X;DP=205;DPB=205;DPRA=0.480874;EPP=46.4397;EPPR=400.39;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=767;QR=7225;RO=183;RPL=20;RPP=46.4397;RPPR=400.39;RPR=0;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=183;SRP=400.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:44:44,0:44:1755:0:0:0,-13.2453,-158.178 0|0:44:44,0:44:1728:0:0:0,-13.2453,-155.757 0|0:46:44,0:44:1735:0:0:0,-13.2453,-156.025 0|0:49:49,0:49:1946:0:0:0,-14.7505,-175.349 1|1:22:2,20:2:61:20:767:-63.5521,-0.829825,0 .:.:.:.:.:.:.:. dDocent_Contig_12192 157 . G A 62.6128 . AB=0.25;ABP=9.52472;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=65;DPB=65;DPRA=1.13208;EPP=9.52472;EPPR=137.642;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.967742;PAO=0;PQA=0;PQR=0;PRO=0;QA=119;QR=2404;RO=62;RPL=0;RPP=9.52472;RPPR=137.642;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=137.642;SRR=62;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:9,3:9:344:3:119:-7.48303,0,-27.7035 0/0:19:19,0:19:742:0:0:0,-5.71957,-67.1086 0/0:12:12,0:12:466:0:0:0,-3.61236,-42.2902 0/0:8:8,0:8:313:0:0:0,-2.40824,-28.5338 0/0:11:11,0:11:436:0:0:0,-3.31133,-37.3754 0/0:3:3,0:3:103:0:0:0,-0.90309,-9.6091 dDocent_Contig_12193 18 . G T 776.653 . AB=0.344086;ABP=22.6469;AC=4;AF=0.333333;AN=12;AO=32;CIGAR=1X;DP=141;DPB=141;DPRA=0.96875;EPP=72.4974;EPPR=239.701;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.3394;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.963303;PAO=0;PQA=0;PQR=0;PRO=0;QA=1238;QR=4261;RO=109;RPL=0;RPP=72.4974;RPPR=239.701;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=109;SRP=239.701;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:4:1,3:1:40:3:121:-10.0761,0,-2.79156 0/1:36:28,8:28:1102:8:314:-17.7877,0,-88.6325 0/1:40:27,13:27:1074:13:482:-31.667,0,-83.3124 0/1:13:5,8:5:195:8:321:-25.3449,0,-14.0103 0/0:13:13,0:13:504:0:0:0,-3.91339,-45.7049 0/0:35:35,0:35:1346:0:0:0,-10.536,-121.416 dDocent_Contig_12194 15 . A G 71.1871 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.11762,-0.60206,0 dDocent_Contig_12195 41 . A C 70.7711 . AB=0.147059;ABP=39.7976;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=274;DPB=274;DPRA=0.942105;EPP=22.5536;EPPR=578.45;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.555556;PAIREDR=0.483019;PAO=0;PQA=0;PQR=0;PRO=0;QA=368;QR=10404;RO=265;RPL=0;RPP=22.5536;RPPR=578.45;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=265;SRP=578.45;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:27,1:27:1059:1:41:0,-4.33427,-91.51 0/0:39:39,0:39:1529:0:0:0,-11.7402,-137.857 0/0:50:49,1:49:1936:1:40:0,-11.0558,-170.448 0/1:34:29,5:29:1105:5:205:-8.59999,0,-89.4845 0/0:56:56,0:56:2206:0:0:0,-16.8577,-198.719 0/0:67:65,2:65:2569:2:82:0,-12.3893,-223.573 dDocent_Contig_12196 21 . C T 460.286 . AB=0.208696;ABP=87.7733;AC=3;AF=0.25;AN=12;AO=28;CIGAR=1X;DP=219;DPB=219;DPRA=1.56604;EPP=55.4358;EPPR=235.494;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.571429;PAIREDR=0.518325;PAO=0;PQA=0;PQR=0;PRO=0;QA=1103;QR=7429;RO=191;RPL=0;RPP=63.8115;RPPR=417.762;RPR=28;RUN=1;SAF=27;SAP=55.4358;SAR=1;SRF=167;SRP=235.494;SRR=24;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:28,6:28:1098:6:231:-10.9178,0,-88.8622 0/1:58:45,13:45:1733:13:509:-28.6946,0,-138.748 0/1:23:18,5:18:714:5:202:-11.6378,0,-57.6588 0/0:51:47,4:47:1838:4:161:0,-0.477045,-150.748 0/0:25:25,0:25:954:0:0:0,-7.52575,-86.1554 0/0:28:28,0:28:1092:0:0:0,-8.42884,-98.5568 dDocent_Contig_12197 8 . A T 130.56 . AB=0.163636;ABP=57.0602;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=3X;DP=520;DPB=520;DPRA=0.655556;EPP=37.7539;EPPR=1097.43;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.0674603;PAO=0;PQA=0;PQR=0;PRO=0;QA=612;QR=19264;RO=504;RPL=0;RPP=37.7539;RPPR=1097.43;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=504;SRP=1097.43;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:13:13,0:13:505:0:0:0,-3.91339,-45.7992 0|1:55:46,9:46:1754:9:342:-14.5788,0,-141.561 0|0:62:57,5:57:2156:5:192:0,-1.01385,-176.62 0|0:53:52,1:52:1972:1:39:0,-12.058,-173.823 0|0:212:212,0:212:8128:0:0:0,-63.8184,-731.321 0|0:125:124,1:124:4749:1:39:0,-33.7322,-423.552 dDocent_Contig_12198 8 . A T 2934.87 . AB=0.0963303;ABP=311.559;AC=2;AF=0.166667;AN=12;AO=21;CIGAR=1X2M5D1M;DP=218;DPB=150.778;DPRA=0;EPP=48.6112;EPPR=213.643;GTI=0;LEN=1;MEANALT=2;MQM=59.7619;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=807;QR=3792;RO=97;RPL=0;RPP=48.6112;RPPR=213.643;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=97;SRP=213.643;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:41:26,2,13:26:1022:2,13:78,484:-31.7617,-33.1743,-116.651,0,-77.6558,-80.1539 0|0:52:28,4,20:28:1085:4,20:154,724:-50.6461,-46.4307,-134.374,0,-76.4945,-83.1141 0|0:36:21,3,12:21:821:3,12:116,436:-29.2612,-26.0499,-92.6621,0,-57.9737,-63.8891 0|0:38:22,2,14:22:864:2,14:76,511:-34.9873,-35.3751,-105.853,0,-64.8418,-66.8592 1|0:17:0,4,13:0:0:4,13:151,484:-52.3567,-39.9798,-38.7757,-12.7528,0,-8.83945 1|0:34:0,6,28:0:0:6,28:232,1053:-105.696,-86.6375,-84.8313,-19.4429,0,-11.014 dDocent_Contig_12199 22 . G A 108.874 . AB=0.111888;ABP=190.106;AC=3;AF=0.25;AN=12;AO=17;CIGAR=1X;DP=253;DPB=253;DPRA=1.06173;EPP=39.9253;EPPR=515.478;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.411765;PAIREDR=0.423729;PAO=0;PQA=0;PQR=0;PRO=0;QA=664;QR=9333;RO=236;RPL=0;RPP=39.9253;RPPR=515.478;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=236;SRP=515.478;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:40,0:40:1563:0:0:0,-12.0412,-140.92 0/1:57:49,8:49:1943:8:313:-11.3734,0,-157.912 0/0:29:28,1:28:1112:1:41:0,-4.6353,-96.2666 0/1:37:33,4:33:1286:4:150:-2.72161,0,-104.875 0/1:49:45,4:45:1778:4:160:-0.0331239,0,-145.491 0/0:41:41,0:41:1651:0:0:0,-12.3422,-148.819 dDocent_Contig_12200 10 . C A 36446.2 . AB=0.436266;ABP=108.468;AC=6;AF=0.5;AN=12;AO=1304;CIGAR=1X;DP=2989;DPB=2989;DPRA=0;EPP=2834.61;EPPR=3583.96;GTI=0;LEN=1;MEANALT=2;MQM=57.7868;MQMR=59.9928;NS=6;NUMALT=1;ODDS=0;PAIRED=0.954755;PAIREDR=0.836222;PAO=0;PQA=0;PQR=0;PRO=0;QA=51533;QR=66380;RO=1673;RPL=0;RPP=2834.61;RPPR=3635.88;RPR=1304;RUN=1;SAF=1304;SAP=2834.61;SAR=0;SRF=1667;SRP=3583.96;SRR=6;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:531:277,254:277:10996:254:10026:-728.734,0,-829.042 0/1:673:337,336:337:13346:336:13340:-988.004,0,-997.604 0/1:380:196,181:196:7786:181:7170:-515.202,0,-586.457 0/1:581:280,300:280:11088:300:11785:-866.59,0,-822.51 0/1:426:316,106:316:12543:106:4208:-240.185,0,-1000.55 0/1:398:267,127:267:10621:127:5004:-317.124,0,-836.245 dDocent_Contig_12201 98 . N C 119.291 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=7.37776;PAIRED=0.5;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=129;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:129:-11.9288,-1.20412,0 ./.:.:.:.:.:.:.:. dDocent_Contig_12202 90 . T C 142.395 . AB=0.32;ABP=10.0459;AC=3;AF=0.25;AN=12;AO=13;CIGAR=1X;DP=103;DPB=103;DPRA=1.51667;EPP=31.2394;EPPR=198.443;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.923077;PAIREDR=0.966667;PAO=0;PQA=0;PQR=0;PRO=0;QA=449;QR=3122;RO=90;RPL=13;RPP=31.2394;RPPR=198.443;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=90;SRP=198.443;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:9,3:9:315:3:108:-6.46281,0,-25.0764 0/0:48:44,4:44:1518:4:125:0,-2.89142,-125.356 0/1:8:5,3:5:172:3:108:-7.66693,0,-13.4102 0/0:18:17,1:17:594:1:36:0,-1.82026,-50.1903 0/0:12:12,0:12:419:0:0:0,-3.61236,-38.0445 0/1:5:3,2:3:104:2:72:-5.33157,0,-8.19794 dDocent_Contig_12204 1 . N G 156.8 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=156;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:77:-7.30883,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:40:-3.99568,-0.30103,0 1/1:1:0,1:0:0:1:39:-3.89656,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_12205 20 . C A 732.863 . AB=0.18932;ABP=175.716;AC=3;AF=0.25;AN=12;AO=45;CIGAR=8M1X10M;DP=434;DPB=434.842;DPRA=1.05;EPP=100.727;EPPR=832.513;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1773;QR=15011;RO=382;RPL=0;RPP=100.727;RPPR=832.513;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=382;SRP=832.513;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:68:47,0,21:47:1839:0,21:0,816:-53.2785,-67.4269,-218.63,0,-151.592,-145.27 0|1:108:92,0,14:92:3628:0,14:0,563:-18.8305,-46.5252,-345.031,0,-298.633,-294.418 0|0:25:25,0,0:25:970:0,0:0,0:0,-7.52575,-87.6004,-7.52575,-87.6004,-87.6004 0|1:30:22,4,4:22:849:4,4:146,158:-6.39351,-1.10307,-69.6063,0,-57.8077,-68.5284 0|0:115:114,0,0:114:4493:0,0:0,0:0,-34.3174,-403.953,-34.3174,-403.953,-403.953 0|0:88:82,0,6:82:3232:0,6:0,236:0,-24.6845,-290.59,-4.87948,-271.178,-269.371 dDocent_Contig_12207 16 . C T 62.2069 . AB=0.15;ABP=45.5712;AC=2;AF=0.25;AN=8;AO=6;CIGAR=1X;DP=57;DPB=57;DPRA=2.35294;EPP=4.45795;EPPR=113.755;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=230;QR=2036;RO=51;RPL=0;RPP=16.0391;RPPR=113.755;RPR=6;RUN=1;SAF=4;SAP=4.45795;SAR=2;SRF=51;SRP=113.755;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 0/1:18:16,2:16:644:2:73:-1.51276,0,-52.8761 0/1:22:18,4:18:705:4:157:-7.88563,0,-57.1487 0/0:5:5,0:5:204:0:0:0,-1.50515,-18.744 ./.:.:.:.:.:.:.:. 0/0:12:12,0:12:483:0:0:0,-3.61236,-43.8212 dDocent_Contig_12208 31 . G A 91.7688 . AB=0.307692;ABP=7.18621;AC=1;AF=0.1;AN=10;AO=4;CIGAR=1X;DP=65;DPB=65;DPRA=1;EPP=11.6962;EPPR=135.47;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.901639;PAO=0;PQA=0;PQR=0;PRO=0;QA=159;QR=2377;RO=61;RPL=0;RPP=11.6962;RPPR=135.47;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=61;SRP=135.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:11:11,0:11:427:0:0:0,-3.31133,-38.7793 0/0:9:9,0:9:351:0:0:0,-2.70927,-31.9496 0/1:13:9,4:9:362:4:159:-10.7789,0,-29.0308 0/0:17:17,0:17:661:0:0:0,-5.11751,-59.8233 0/0:15:15,0:15:576:0:0:0,-4.51545,-52.1729 ./.:.:.:.:.:.:.:. dDocent_Contig_12209 55 . T A 37.0824 . AB=0.0980392;ABP=146.157;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=352;DPB=352;DPRA=0.919355;EPP=33.4109;EPPR=736.968;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.785714;PAIREDR=0.707101;PAO=0;PQA=0;PQR=0;PRO=0;QA=552;QR=13360;RO=338;RPL=14;RPP=33.4109;RPPR=736.968;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=338;SRP=736.968;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:57:51,6:51:2016:6:241:-4.90709,0,-164.474 0/0:70:68,2:68:2686:2:74:0,-14.0467,-234.839 0/0:63:63,0:63:2511:0:0:0,-18.9649,-226.13 0/0:61:61,0:61:2411:0:0:0,-18.3628,-217.146 0/0:56:54,2:54:2107:2:74:0,-9.83366,-182.773 0/1:45:41,4:41:1629:4:163:-1.51208,0,-133.293 dDocent_Contig_12211 63 . T C 453.74 . AB=0.236559;ABP=59.0716;AC=3;AF=0.375;AN=8;AO=23;CIGAR=1X;DP=113;DPB=113;DPRA=0;EPP=52.9542;EPPR=198.443;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=901;QR=3515;RO=90;RPL=23;RPP=52.9542;RPPR=198.443;RPR=0;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=90;SRP=198.443;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:9,10:9:359:10:392:-29.9135,0,-26.9532 0/1:36:32,4:32:1251:4:162:-4.12967,0,-102.025 0/1:38:30,8:30:1155:8:309:-16.7279,0,-92.7864 0/0:20:19,1:19:750:1:38:0,-2.22333,-64.0246 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12212 15 . A T 2900.41 . AB=0.479042;ABP=3.64744;AC=5;AF=0.5;AN=10;AO=95;CIGAR=2X;DP=210;DPB=210;DPRA=1.625;EPP=209.3;EPPR=250.558;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.947368;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3828;QR=4546;RO=114;RPL=0;RPP=209.3;RPPR=250.558;RPR=95;RUN=1;SAF=95;SAP=209.3;SAR=0;SRF=114;SRP=250.558;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:56:36,20:36:1439:20:811:-56.448,0,-112.907 0|1:83:33,50:33:1325:50:2015:-156.552,0,-94.529 0|0:28:28,0:28:1117:0:0:0,-8.42884,-100.816 0|1:28:17,10:17:665:10:400:-27.8235,0,-51.6419 1|1:15:0,15:0:0:15:602:-54.5181,-4.51545,0 .:.:.:.:.:.:.:. dDocent_Contig_12213 20 . T C 98.4621 . AB=0.1875;ABP=30.1537;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=90;DPB=90;DPRA=1.10345;EPP=16.0391;EPPR=183.243;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.578313;PAO=0;PQA=0;PQR=0;PRO=0;QA=242;QR=2999;RO=83;RPL=0;RPP=16.0391;RPPR=183.243;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=83;SRP=183.243;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5011 0/0:17:17,0:17:605:0:0:0,-5.11751,-54.7689 0/0:11:11,0:11:416:0:0:0,-3.31133,-37.7911 0/1:11:8,3:8:260:3:122:-8.06116,0,-20.4033 0/1:21:17,3:17:608:3:120:-5.00682,0,-48.928 0/0:21:21,0:21:786:0:0:0,-6.32163,-71.0643 dDocent_Contig_12214 8 . A G 5140.2 . AB=0.726852;ABP=99.5604;AC=7;AF=0.583333;AN=12;AO=170;CIGAR=1X;DP=229;DPB=229;DPRA=0;EPP=372.161;EPPR=131.127;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6516;QR=2223;RO=59;RPL=0;RPP=372.161;RPPR=131.127;RPR=170;RUN=1;SAF=170;SAP=372.161;SAR=0;SRF=59;SRP=131.127;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:58:15,43:15:565:43:1643:-130.677,0,-33.7299 0/1:29:6,23:6:234:23:885:-71.2396,0,-12.7012 0/1:32:9,23:9:329:23:884:-70.2445,0,-20.3237 0/1:30:5,25:5:191:25:956:-77.3225,0,-8.5272 1/1:13:0,13:0:0:13:493:-44.7144,-3.91339,0 0/1:67:24,43:24:904:43:1655:-129.044,0,-61.5066 dDocent_Contig_12215 18 . G T 1157.56 . AB=0.506329;ABP=3.03779;AC=3;AF=0.25;AN=12;AO=47;CIGAR=1X;DP=252;DPB=252;DPRA=1.3;EPP=105.07;EPPR=448.162;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.829787;PAIREDR=0.995122;PAO=0;PQA=0;PQR=0;PRO=0;QA=1876;QR=8187;RO=205;RPL=0;RPP=105.07;RPPR=448.162;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=205;SRP=448.162;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:4:4,0:4:152:0:0:0,-1.20412,-14.0473 0/1:24:10,14:10:407:14:569:-44.3278,0,-29.7653 0/1:24:12,12:12:487:12:480:-36.3246,0,-36.9567 0/1:31:17,14:17:691:14:548:-40.3255,0,-53.1863 0/0:66:66,0:66:2621:0:0:0,-19.868,-236.019 0/0:103:96,7:96:3829:7:279:0,-5.52605,-319.135 dDocent_Contig_12216 119 . G T 139.678 . AB=0.538462;ABP=3.17734;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=2X;DP=176;DPB=176;DPRA=0.338095;EPP=9.04217;EPPR=363.475;GTI=0;LEN=1;MEANALT=1;MQM=51.6667;MQMR=51.9277;NS=6;NUMALT=1;ODDS=0;PAIRED=0.777778;PAIREDR=0.813253;PAO=0;PQA=0;PQR=0;PRO=0;QA=302;QR=5692;RO=166;RPL=0;RPP=22.5536;RPPR=363.475;RPR=9;RUN=1;SAF=2;SAP=9.04217;SAR=7;SRF=0;SRP=363.475;SRR=166;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:6:4,2:4:137:2:70:-4.84122,0,-10.8619 0|0:31:30,0:30:1028:0:0:0,-9.0309,-90.71 0|1:7:2,5:2:70:5:157:-12.332,0,-2.63751 0|0:13:12,1:12:407:1:38:0,-1.7241,-34.7665 0|0:45:44,1:44:1517:1:37:0,-11.2632,-120.132 0|0:74:74,0:74:2533:0:0:0,-22.2762,-195.74 dDocent_Contig_12217 35 . C G 4045.89 . AB=0.409692;ABP=19.0907;AC=8;AF=0.666666;AN=12;AO=93;CIGAR=1X4M;DP=227;DPB=227;DPRA=0;EPP=204.957;EPPR=113.755;GTI=0;LEN=1;MEANALT=2.16667;MQM=56.7849;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=0.903226;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3520;QR=1939;RO=51;RPL=0;RPP=204.957;RPPR=113.755;RPR=93;RUN=1;SAF=93;SAP=204.957;SAR=0;SRF=51;SRP=113.755;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:33:14,7,12:14:523:7,12:271,480:-35.333,-17.2904,-57.9884,0,-20.5441,-39.198 1|1:58:6,22,30:6:225:22,30:818,1123:-138.119,-72.988,-84.7936,-48.5062,0,-57.9038 0|1:26:10,5,10:10:387:5,10:173,379:-28.0908,-17.0548,-47.3502,0,-17.7858,-28.8195 0|1:52:18,18,16:18:690:18,16:709,606:-52.9185,0,-51.2143,-9.2171,-7.50793,-61.0238 1|1:39:0,18,21:0:0:18,21:697,817:-124.498,-67.2444,-61.8259,-57.6403,0,-51.3187 0|1:19:3,12,4:3:114:12,4:459,115:-36.8418,0,-5.78273,-29.1692,-0.853317,-37.3137 dDocent_Contig_12218 98 . N A 49.4052 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=52;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:52:-4.93943,-0.60206,0 dDocent_Contig_12220 7 . C T 31.7234 . AB=0.113636;ABP=60.0608;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=154;DPB=154;DPRA=1.08333;EPP=20.3821;EPPR=320.045;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.938356;PAO=0;PQA=0;PQR=0;PRO=0;QA=304;QR=5657;RO=146;RPL=0;RPP=20.3821;RPPR=320.045;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=146;SRP=320.045;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:27,1:27:1045:1:35:0,-4.93021,-90.8587 0/0:24:23,1:23:890:1:39:0,-3.32816,-76.5226 0/1:9:7,2:7:272:2:78:-4.6942,0,-22.138 0/0:24:24,0:24:932:0:0:0,-7.22472,-84.1961 0/0:34:33,1:33:1279:1:39:0,-6.33846,-111.503 0/1:35:32,3:32:1239:3:113:-0.0033585,0,-101.267 dDocent_Contig_12221 20 . T A 824.625 . AB=0.31405;ABP=39.3511;AC=4;AF=0.333333;AN=12;AO=41;CIGAR=1X;DP=183;DPB=183;DPRA=0;EPP=11.961;EPPR=311.359;GTI=0;LEN=1;MEANALT=1;MQM=53.8537;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0243902;PAIREDR=0.901408;PAO=0;PQA=0;PQR=0;PRO=0;QA=1505;QR=5699;RO=142;RPL=0;RPP=92.0407;RPPR=311.359;RPR=41;RUN=1;SAF=14;SAP=11.961;SAR=27;SRF=142;SRP=311.359;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:28,1:28:1112:1:41:0,-4.6353,-96.271 0/0:33:31,2:31:1250:2:75:0,-2.88813,-105.722 0/1:32:24,8:24:973:8:283:-16.0419,0,-78.2325 0/1:29:15,14:15:589:14:498:-36.3371,0,-44.6133 0/1:29:22,7:22:889:7:271:-16.0049,0,-71.5859 0/1:31:22,9:22:886:9:337:-21.3004,0,-70.7141 dDocent_Contig_12222 59 . T G 5941.48 . AB=0.623729;ABP=42.2367;AC=7;AF=0.583333;AN=12;AO=199;CIGAR=1X;DP=311;DPB=311;DPRA=0;EPP=435.133;EPPR=246.215;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7703;QR=4437;RO=112;RPL=199;RPP=435.133;RPPR=246.215;RPR=0;RUN=1;SAF=199;SAP=435.133;SAR=0;SRF=112;SRP=246.215;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:40:34,6:34:1365:6:236:-9.57017,0,-111.068 0/1:92:21,71:21:834:71:2738:-218.853,0,-47.6814 0/1:67:26,41:26:1028:41:1580:-122.259,0,-72.6472 0/1:61:17,44:17:679:44:1714:-136.126,0,-43.0791 1/1:16:1,15:1:27:15:579:-49.7462,-2.1167,0 0/1:35:13,22:13:504:22:856:-66.8158,0,-35.168 dDocent_Contig_12223 39 . T G 357.096 . AB=0.192308;ABP=88.5329;AC=3;AF=0.25;AN=12;AO=20;CIGAR=1X;DP=199;DPB=199;DPRA=1.09474;EPP=46.4397;EPPR=389.532;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.5;PAIREDR=0.52809;PAO=0;PQA=0;PQR=0;PRO=0;QA=776;QR=6836;RO=178;RPL=0;RPP=46.4397;RPPR=389.532;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=178;SRP=389.532;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:39:35,4:35:1327:4:149:-2.0308,0,-107.966 0/1:23:20,2:20:771:2:81:-0.701643,0,-62.7498 0/0:31:31,0:31:1203:0:0:0,-9.33193,-108.556 0/1:42:28,14:28:1092:14:546:-36.8348,0,-85.9325 0/0:23:23,0:23:906:0:0:0,-6.92369,-81.853 0/0:41:41,0:41:1537:0:0:0,-12.3422,-138.576 dDocent_Contig_12224 21 . C T 41.4962 . AB=0.25;ABP=7.35324;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=140;DPB=140;DPRA=1.29412;EPP=13.8677;EPPR=296.159;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=204;QR=5418;RO=135;RPL=0;RPP=13.8677;RPPR=296.159;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=135;SRP=296.159;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:8:6,2:6:240:2:82:-5.37144,0,-19.5674 0/0:47:44,3:44:1760:3:122:0,-2.77592,-147.241 0/0:24:24,0:24:950:0:0:0,-7.22472,-85.8006 0/0:14:14,0:14:571:0:0:0,-4.21442,-51.7319 0/0:13:13,0:13:528:0:0:0,-3.91339,-47.8669 0/0:34:34,0:34:1369:0:0:0,-10.235,-123.467 dDocent_Contig_12225 13 . C T 32.2917 . AB=0.121951;ABP=53.9075;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=182;DPB=182;DPRA=0.857143;EPP=16.0391;EPPR=385.189;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.619318;PAO=0;PQA=0;PQR=0;PRO=0;QA=241;QR=6925;RO=176;RPL=0;RPP=16.0391;RPPR=385.189;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=176;SRP=385.189;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:22,3:22:872:3:120:-3.66194,0,-71.2653 0/0:25:25,0:25:962:0:0:0,-7.52575,-86.8782 0/1:16:14,2:14:560:2:80:-2.77531,0,-45.9272 0/0:43:42,1:42:1679:1:41:0,-8.84972,-147.239 0/0:46:46,0:46:1822:0:0:0,-13.8474,-164.194 0/0:27:27,0:27:1030:0:0:0,-8.12781,-92.981 dDocent_Contig_12226 85 . C T 2633.22 . AB=0.236782;ABP=264.79;AC=7;AF=0.583333;AN=12;AO=122;CIGAR=1X;DP=454;DPB=454;DPRA=0;EPP=226.28;EPPR=721.768;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4459;QR=11652;RO=331;RPL=122;RPP=267.93;RPPR=721.768;RPR=0;RUN=1;SAF=5;SAP=226.28;SAR=117;SRF=331;SRP=721.768;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:87:73,13:73:2563:13:471:-16.7508,0,-204.96 0/1:77:54,23:54:1873:23:847:-53.3752,0,-145.668 0/1:98:77,21:77:2726:21:769:-40.0369,0,-216.084 0/1:137:115,22:115:4084:22:807:-31.7151,0,-326.508 0/1:36:12,24:12:406:24:870:-67.7844,0,-26.0249 1/1:19:0,19:0:0:19:695:-62.8812,-5.71957,0 dDocent_Contig_12227 33 . T C 2873.31 . AB=0.548913;ABP=6.83398;AC=6;AF=0.5;AN=12;AO=101;CIGAR=1M1X;DP=184;DPB=184;DPRA=0;EPP=222.329;EPPR=170.214;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=1.38778e-17;PAIRED=0.584158;PAIREDR=0.701299;PAO=0;PQA=0;PQR=0;PRO=0;QA=3904;QR=3060;RO=77;RPL=0;RPP=222.329;RPPR=170.214;RPR=101;RUN=1;SAF=101;SAP=222.329;SAR=0;SRF=77;SRP=170.214;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:22:7,2,13,0:7:269:2,13,0:74,499,0:-38.8564,-34.9115,-56.3882,0,-16.0388,-18.1762,-40.9636,-56.9903,-22.0896,-63.043 0|1:40:15,0,25,0:15:594:0,25,0:0,961,0:-74.7478,-79.2632,-128.154,0,-49.2816,-41.7558,-79.2632,-128.154,-49.2816,-128.154 0|1:9:3,0,6,0:3:119:0,6,0:0,239,0:-19.1746,-20.0777,-29.8732,0,-10.1923,-8.38612,-20.0777,-29.8732,-10.1923,-29.8732 0|1:29:15,0,14,0:15:595:0,14,0:0,558,0:-41.8327,-46.3481,-95.3209,0,-49.3699,-45.1555,-46.3481,-95.3209,-49.3699,-95.3209 0|1:40:20,0,17,3:20:810:0,17,3:0,641,121:-46.4688,-52.4894,-119.292,0,-66.7923,-61.6748,-42.5113,-109.317,-56.8182,-108.414 0|1:44:17,0,26,1:17:673:0,26,1:0,1006,41:-77.4722,-82.5897,-137.979,0,-55.3731,-47.5463,-79.2048,-134.595,-51.9882,-134.294 dDocent_Contig_12229 26 . T C 161.794 . AB=0.461538;ABP=3.17734;AC=1;AF=0.125;AN=8;AO=6;CIGAR=1X;DP=39;DPB=39;DPRA=1.5;EPP=16.0391;EPPR=74.6689;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=238;QR=1302;RO=33;RPL=0;RPP=16.0391;RPPR=74.6689;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=33;SRP=74.6689;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:349:0:0:0,-2.70927,-31.763 0/0:7:7,0:7:280:0:0:0,-2.10721,-25.5692 0/0:10:10,0:10:404:0:0:0,-3.0103,-36.7201 0/1:13:7,6:7:269:6:238:-17.8784,0,-20.6558 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12230 10 . A T 33.4519 . AB=0.103093;ABP=135.739;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=278;DPB=278;DPRA=0.758621;EPP=37.7539;EPPR=571.936;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.3125;PAIREDR=0.351145;PAO=0;PQA=0;PQR=0;PRO=0;QA=634;QR=10521;RO=262;RPL=0;RPP=37.7539;RPPR=571.936;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=262;SRP=571.936;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:48:43,5:43:1725:5:200:-3.92959,0,-141.019 0/0:58:58,0:58:2316:0:0:0,-17.4597,-208.603 0/0:53:51,2:51:2053:2:82:0,-8.17491,-177.172 0/1:49:44,5:44:1757:5:189:-2.61938,0,-143.6 0/0:34:32,2:32:1293:2:81:0,-2.54929,-108.947 0/0:36:34,2:34:1377:2:82:0,-3.0574,-116.404 dDocent_Contig_12231 83 . A C 440.208 . AB=0.439024;ABP=4.33437;AC=1;AF=0.1;AN=10;AO=22;CIGAR=1X;DP=187;DPB=187;DPRA=1.6;EPP=50.7827;EPPR=359.132;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=769;QR=5794;RO=164;RPL=22;RPP=50.7827;RPPR=359.132;RPR=0;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=164;SRP=359.132;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:51:48,3:48:1690:3:95:0,-6.48832,-143.522 0/1:41:22,18:22:767:18:638:-45.6227,0,-57.2247 0/0:52:52,0:52:1850:0:0:0,-15.6536,-166.77 0/0:40:39,1:39:1389:1:36:0,-8.44292,-121.704 ./.:.:.:.:.:.:.:. 0/0:3:3,0:3:98:0:0:0,-0.90309,-9.14329 dDocent_Contig_12232 9 . T G 3220.44 . AB=0.487952;ABP=3.2196;AC=7;AF=0.583333;AN=12;AO=114;CIGAR=1X;DP=203;DPB=203;DPRA=0;EPP=250.558;EPPR=191.928;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.991228;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4334;QR=3306;RO=87;RPL=0;RPP=250.558;RPPR=191.928;RPR=114;RUN=1;SAF=114;SAP=250.558;SAR=0;SRF=87;SRP=191.928;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:9,11:9:322:11:414:-31.5855,0,-23.2956 0/1:23:13,10:13:494:10:390:-28.535,0,-37.8829 0/1:56:36,19:36:1368:19:730:-49.0842,0,-106.45 0/1:28:17,11:17:659:11:400:-27.9071,0,-51.2183 1/1:37:3,33:3:115:33:1241:-101.285,-0.380437,0 0/1:39:9,30:9:348:30:1159:-92.8684,0,-19.9401 dDocent_Contig_12234 24 . C G 31.0047 . AB=0.1875;ABP=16.582;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=64;DPB=64;DPRA=1.66667;EPP=9.52472;EPPR=135.47;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=98;QR=2390;RO=61;RPL=0;RPP=9.52472;RPPR=135.47;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=61;SRP=135.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:13,3:13:516:3:98:-4.32188,0,-41.9715 0/0:10:10,0:10:393:0:0:0,-3.0103,-35.7245 0/0:4:4,0:4:159:0:0:0,-1.20412,-14.692 0/0:18:18,0:18:678:0:0:0,-5.41854,-61.3342 0/0:4:4,0:4:163:0:0:0,-1.20412,-15.0584 0/0:12:12,0:12:481:0:0:0,-3.61236,-43.6404 dDocent_Contig_12237 7 . C T 126.406 . AB=0.1375;ABP=94.3207;AC=1;AF=0.0833333;AN=12;AO=29;CIGAR=1X;DP=586;DPB=586;DPRA=0.91619;EPP=65.983;EPPR=1212.52;GTI=0;LEN=1;MEANALT=1;MQM=59.3448;MQMR=59.9641;NS=6;NUMALT=1;ODDS=0;PAIRED=0.965517;PAIREDR=0.996409;PAO=0;PQA=0;PQR=0;PRO=0;QA=1113;QR=21467;RO=557;RPL=0;RPP=65.983;RPPR=1212.52;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=557;SRP=1212.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:105:105,0:105:4048:0:0:0,-31.6081,-364.379 0/0:137:126,11:126:4821:11:421:0,-2.99843,-395.68 0/0:86:85,1:85:3297:1:39:0,-21.992,-292.968 0/0:139:134,5:134:5182:5:192:0,-24.1932,-448.699 0/0:39:38,1:38:1464:1:39:0,-7.84361,-128.139 0/1:80:69,11:69:2655:11:422:-14.1635,0,-215.054 dDocent_Contig_12239 7 . C T 917.389 . AB=0.207469;ABP=182.143;AC=6;AF=0.5;AN=12;AO=50;CIGAR=1X;DP=241;DPB=241;DPRA=0;EPP=111.584;EPPR=417.762;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.68;PAIREDR=0.612565;PAO=0;PQA=0;PQR=0;PRO=0;QA=1926;QR=7354;RO=191;RPL=0;RPP=111.584;RPPR=417.762;RPR=50;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=191;SRP=417.762;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:31,7:31:1161:7:269:-13.135,0,-93.3423 0/1:35:24,11:24:934:11:420:-27.6162,0,-73.8397 0/1:29:23,6:23:891:6:232:-12.5191,0,-71.7798 0/1:40:33,7:33:1271:7:271:-12.7151,0,-102.64 0/1:47:41,6:41:1592:6:233:-7.19167,0,-129.397 0/1:52:39,13:39:1505:13:501:-29.7836,0,-120.069 dDocent_Contig_12240 49 . T C 1238.52 . AB=0.262009;ABP=115.671;AC=6;AF=0.5;AN=12;AO=60;CIGAR=1X;DP=229;DPB=229;DPRA=0;EPP=8.22183;EPPR=3.6399;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.45;PAIREDR=0.47929;PAO=0;PQA=0;PQR=0;PRO=0;QA=2244;QR=6114;RO=169;RPL=0;RPP=133.299;RPPR=369.989;RPR=60;RUN=1;SAF=36;SAP=8.22183;SAR=24;SRF=81;SRP=3.6399;SRR=88;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:32,5:32:1166:5:179:-5.31814,0,-94.0967 0/1:36:19,17:19:693:17:648:-47.8069,0,-51.8534 0/1:39:32,7:32:1097:7:254:-11.4648,0,-87.2681 0/1:42:30,12:30:1129:12:425:-25.9306,0,-89.2564 0/1:38:30,8:30:1075:8:313:-17.0923,0,-85.595 0/1:37:26,11:26:954:11:425:-27.4607,0,-75.025 dDocent_Contig_12242 12 . G C 766.721 . AB=0.160772;ABP=313.866;AC=4;AF=0.333333;AN=12;AO=51;CIGAR=1X;DP=486;DPB=486;DPRA=0.683636;EPP=113.755;EPPR=947.601;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1997;QR=16850;RO=435;RPL=0;RPP=113.755;RPPR=947.601;RPR=51;RUN=1;SAF=51;SAP=113.755;SAR=0;SRF=435;SRP=947.601;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:72:62,10:62:2405:10:381:-12.9647,0,-194.959 0/0:65:64,1:64:2506:1:40:0,-15.5713,-221.714 0/1:54:48,6:48:1830:6:237:-5.44768,0,-148.671 0/1:84:74,10:74:2863:10:401:-11.1634,0,-232.523 0/0:110:110,0:110:4266:0:0:0,-33.1133,-383.962 0/1:101:77,24:77:2980:24:938:-54.3182,0,-237.93 dDocent_Contig_12243 18 . C T 2719.15 . AB=0.434389;ABP=11.2737;AC=4;AF=0.4;AN=10;AO=96;CIGAR=1X1M1X;DP=230;DPB=230;DPRA=6.13889;EPP=211.472;EPPR=287.473;GTI=0;LEN=1;MEANALT=1.75;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0.9375;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3823;QR=5176;RO=131;RPL=0;RPP=211.472;RPPR=287.473;RPR=96;RUN=1;SAF=96;SAP=211.472;SAR=0;SRF=131;SRP=287.473;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:38:29,8:29:1153:8:319:-17.8051,0,-92.8032 0|1:54:43,10:43:1705:10:395:-19.7482,0,-137.541 0|1:15:8,7:8:308:7:284:-21.4183,0,-23.5623 0|1:114:42,71:42:1649:71:2825:-220.245,0,-114.531 .:.:.:.:.:.:.:. 0|0:9:9,0:9:361:0:0:0,-2.70927,-32.8539 dDocent_Contig_12245 68 . A T 2376.48 . AB=0.466667;ABP=4.74748;AC=5;AF=0.416667;AN=12;AO=85;CIGAR=1X;DP=202;DPB=202;DPRA=0;EPP=187.585;EPPR=257.073;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.576471;PAIREDR=0.452991;PAO=0;PQA=0;PQR=0;PRO=0;QA=3368;QR=4606;RO=117;RPL=79;RPP=139.149;RPPR=257.073;RPR=6;RUN=1;SAF=79;SAP=139.149;SAR=6;SRF=117;SRP=257.073;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:29:21,8:21:827:8:297:-18.348,0,-66.0143 0/1:39:25,14:25:987:14:555:-38.5486,0,-77.3881 0/0:22:21,1:21:837:1:41:0,-2.52809,-71.5457 0/1:37:19,18:19:746:18:704:-52.544,0,-56.3228 0/1:34:17,17:17:647:17:683:-51.5649,0,-48.3077 0/1:41:14,27:14:562:27:1088:-85.8641,0,-38.5809 dDocent_Contig_12247 15 . A G 1635.12 . AB=0.666667;ABP=22.5536;AC=2;AF=0.166667;AN=12;AO=54;CIGAR=1X;DP=216;DPB=216;DPRA=1.2;EPP=120.27;EPPR=354.789;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.944444;PAIREDR=0.938272;PAO=0;PQA=0;PQR=0;PRO=0;QA=2117;QR=6353;RO=162;RPL=0;RPP=120.27;RPPR=354.789;RPR=54;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=162;SRP=354.789;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:710:0:0:0,-5.41854,-64.2249 0/0:50:50,0:50:1997:0:0:0,-15.0515,-179.927 0/0:32:32,0:32:1257:0:0:0,-9.63296,-113.402 0/0:35:35,0:35:1382:0:0:0,-10.536,-124.644 0/1:57:16,41:16:583:41:1608:-127.805,0,-35.63 0/1:24:11,13:11:424:13:509:-38.9286,0,-31.2806 dDocent_Contig_12249 10 . T G 7722.28 . AB=0.170804;ABP=950.887;AC=3;AF=0.25;AN=12;AO=172;CIGAR=1X1M1X;DP=1007;DPB=1007;DPRA=0;EPP=376.504;EPPR=1253.84;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.994186;PAIREDR=0.982877;PAO=0;PQA=0;PQR=0;PRO=0;QA=6799;QR=22651;RO=584;RPL=0;RPP=376.504;RPPR=1271.15;RPR=172;RUN=1;SAF=172;SAP=376.504;SAR=0;SRF=582;SRP=1253.84;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:150:81,39,30:81:3141:39,30:1559,1204:-104.032,0,-246.295,-29.2135,-158.83,-278.219 0|1:156:73,58,25:73:2861:58,25:2289,1014:-166.349,0,-217.793,-104.698,-151.626,-332.434 0|1:117:75,21,20:75:2928:21,20:840,797:-46.6175,0,-234.363,-3.56297,-175.051,-238.226 0|0:159:102,27,30:102:3977:27,30:1051,1207:-68.7745,-13.119,-331.863,0,-240.515,-317.851 0|0:206:120,12,73:120:4620:12,73:464,2923:-203.776,-201.796,-577.482,0,-341.199,-357.329 0|0:219:133,15,71:133:5124:15,71:596,2840:-193.901,-184.87,-601.062,0,-371.637,-399.334 dDocent_Contig_12251 45 . C A 102.701 . AB=0.190476;ABP=37.9607;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1X;DP=393;DPB=393;DPRA=0.871429;EPP=3.12459;EPPR=26.1164;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.947368;PAIREDR=0.565684;PAO=0;PQA=0;PQR=0;PRO=0;QA=678;QR=14081;RO=373;RPL=0;RPP=44.2683;RPPR=795.691;RPR=19;RUN=1;SAF=10;SAP=3.12459;SAR=9;SRF=220;SRP=29.1437;SRR=153;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:50,0:50:1892:0:0:0,-15.0515,-170.511 0/1:42:34,8:34:1308:8:268:-11.793,0,-105.351 0/0:32:30,2:30:1110:2:75:0,-2.51337,-93.0643 0/0:53:53,0:53:2015:0:0:0,-15.9546,-181.565 0/0:109:100,9:100:3775:9:335:0,-2.31436,-309.327 0/0:107:106,0:106:3981:0:0:0,-31.9092,-357.95 dDocent_Contig_12253 107 . N A 232.767 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=7;CIGAR=1X2M1X;DP=7;DPB=10.75;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=242;QR=0;RO=0;RPL=0;RPP=18.2106;RPPR=0;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:3:0,3:0:0:3:104:-9.70309,-0.90309,0 1|1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 1|1:3:0,3:0:0:3:105:-9.79616,-0.90309,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_12254 53 . G T 111.501 . AB=0.189189;ABP=34.0565;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=1X;DP=148;DPB=148;DPRA=0.666667;EPP=18.2106;EPPR=309.188;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.978723;PAO=0;PQA=0;PQR=0;PRO=0;QA=275;QR=5497;RO=141;RPL=7;RPP=18.2106;RPPR=309.188;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=141;SRP=309.188;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:828:0:0:0,-6.32163,-74.8352 0/1:16:12,4:12:457:4:157:-9.6912,0,-36.6583 0/1:21:18,3:18:709:3:118:-4.68057,0,-57.8137 0/0:21:21,0:21:822:0:0:0,-6.32163,-74.296 0/0:39:39,0:39:1507:0:0:0,-11.7402,-135.877 0/0:30:30,0:30:1174:0:0:0,-9.0309,-105.934 dDocent_Contig_12255 37 . G A 32.3552 . AB=0.121212;ABP=44.1367;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=158;DPB=158;DPRA=2.1039;EPP=13.8677;EPPR=335.246;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.2;PAIREDR=0.627451;PAO=0;PQA=0;PQR=0;PRO=0;QA=186;QR=5953;RO=153;RPL=0;RPP=13.8677;RPPR=335.246;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=153;SRP=335.246;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1630:0:0:0,-12.3422,-146.93 0/0:48:47,1:47:1816:1:27:0,-11.7497,-160.959 0/1:33:29,4:29:1108:4:159:-4.75796,0,-90.0739 0/0:25:25,0:25:980:0:0:0,-7.52575,-88.4925 0/0:9:9,0:9:340:0:0:0,-2.70927,-30.9478 0/0:2:2,0:2:79:0:0:0,-0.60206,-7.49763 dDocent_Contig_12256 100 . N C 433.759 . AB=0.4;ABP=3.44459;AC=12;AF=1;AN=12;AO=14;CIGAR=4X3I5X;DP=52;DPB=69.2222;DPRA=2.38889;EPP=33.4109;EPPR=0;GTI=0;LEN=1;MEANALT=2.25;MQM=8.14286;MQMR=0;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=499;QR=0;RO=0;RPL=0;RPP=33.4109;RPPR=0;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:5:0,5,0:0:0:5,0:91,0:-7.5218,-1.50515,0,-7.5218,-1.50515,-7.5218 1|1:17:0,13,4:0:0:13,4:262,142:-21.5244,-3.91339,0,-19.4397,-1.71525,-18.2356 1|1:4:0,4,0:0:0:4,0:84,0:-4.75937,-1.20412,0,-4.75937,-1.20412,-4.75937 1|1:5:0,2,2:0:0:2,2:24,70:-3.03018,-1.97531,-1.37325,-1.09304,0,-0.490981 1|1:9:0,6,3:0:0:6,3:37,108:-1.99928,-1.80618,0,-1.54874,-1.30993,-0.64565 1|1:12:0,7,5:0:0:7,5:65,179:-4.21152,-2.10721,0,-2.65949,-0.487697,-1.15434 dDocent_Contig_12257 28 . A G 230.238 . AB=0.194444;ABP=32.2045;AC=4;AF=0.333333;AN=12;AO=17;CIGAR=1X;DP=146;DPB=146;DPRA=29;EPP=39.9253;EPPR=283.13;GTI=0;LEN=1;MEANALT=1;MQM=40.1176;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.976744;PAO=0;PQA=0;PQR=0;PRO=0;QA=689;QR=5097;RO=129;RPL=0;RPP=39.9253;RPPR=283.13;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=129;SRP=283.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:10,2:10:393:2:82:-3.69526,0,-32.1131 0/0:54:52,2:52:2075:2:82:0,-8.948,-179.632 0/1:24:19,5:19:748:5:200:-8.87468,0,-60.4186 0/0:51:47,4:47:1841:4:163:0,-1.17606,-151.726 1/1:4:0,4:0:0:4:162:-13.6738,-1.20412,0 0/0:1:1,0:1:40:0:0:0,-0.30103,-3.99568 dDocent_Contig_12259 108 . G C 75.838 . AB=0.357143;ABP=5.49198;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=100;DPB=100;DPRA=1.35185;EPP=20.3821;EPPR=202.786;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.826087;PAO=0;PQA=0;PQR=0;PRO=0;QA=234;QR=2992;RO=92;RPL=0;RPP=20.3821;RPPR=202.786;RPR=8;RUN=1;SAF=0;SAP=20.3821;SAR=8;SRF=0;SRP=202.786;SRR=92;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:9:8,1:8:279:1:30:-0.290296,0,-22.7397 0/0:43:41,2:41:1296:2:60:0,-7.24511,-111.218 0/0:23:23,0:23:753:0:0:0,-6.92369,-68.0735 0/0:16:15,1:15:493:1:31:0,-1.71703,-41.5827 0/1:5:1,4:1:34:4:113:-8.94587,0,-1.89376 0/0:4:4,0:4:137:0:0:0,-1.20412,-12.6681 dDocent_Contig_12261 22 . T C 65.8669 . AB=0.12;ABP=97.0785;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=153;DPB=153;DPRA=1.92308;EPP=22.5536;EPPR=315.702;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.965278;PAO=0;PQA=0;PQR=0;PRO=0;QA=342;QR=5421;RO=144;RPL=0;RPP=22.5536;RPPR=315.702;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=144;SRP=315.702;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:577:0:0:0,-4.51545,-52.2679 0/1:20:18,2:18:666:2:72:-0.815314,0,-54.24 0/1:55:48,7:48:1733:7:270:-8.10487,0,-139.654 0/0:21:21,0:21:808:0:0:0,-6.32163,-73.0377 0/0:17:17,0:17:655:0:0:0,-5.11751,-59.2811 0/0:25:25,0:25:982:0:0:0,-7.52575,-88.6866 dDocent_Contig_12262 7 . C A 246.458 . AB=0.25;ABP=29.068;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=148;DPB=148;DPRA=0.96;EPP=29.068;EPPR=298.331;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.916667;PAIREDR=0.808824;PAO=0;PQA=0;PQR=0;PRO=0;QA=462;QR=5238;RO=136;RPL=0;RPP=29.068;RPPR=298.331;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=136;SRP=298.331;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1163:0:0:0,-9.0309,-104.969 0/0:24:24,0:24:911:0:0:0,-7.22472,-82.3052 0/0:11:11,0:11:423:0:0:0,-3.31133,-38.4232 0/0:35:35,0:35:1350:0:0:0,-10.536,-121.784 0/1:23:15,8:15:576:8:306:-20.9761,0,-45.2585 0/1:25:21,4:21:815:4:156:-6.89154,0,-66.1495 dDocent_Contig_12263 32 . G T 120.024 . AB=0.152941;ABP=91.9385;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=205;DPB=205;DPRA=1.55;EPP=37.7539;EPPR=413.419;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.8125;PAIREDR=0.650794;PAO=0;PQA=0;PQR=0;PRO=0;QA=550;QR=7415;RO=189;RPL=0;RPP=37.7539;RPPR=413.419;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=189;SRP=413.419;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:27:21,6:21:794:6:209:-11.023,0,-63.6437 0/1:58:51,7:51:1989:7:237:-4.20079,0,-161.744 0/0:30:29,1:29:1146:1:33:0,-5.73176,-100.12 0/0:40:38,2:38:1526:2:71:0,-5.2993,-130.834 0/0:29:29,0:29:1137:0:0:0,-8.72987,-102.607 0/0:21:21,0:21:823:0:0:0,-6.32163,-74.3797 dDocent_Contig_12264 14 . A G 78.1635 . AB=0.210526;ABP=16.8392;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=250;DPB=250;DPRA=0.994012;EPP=18.2106;EPPR=530.678;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=286;QR=9590;RO=243;RPL=0;RPP=18.2106;RPPR=530.678;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=243;SRP=530.678;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:64:61,3:61:2383:3:123:0,-7.80113,-203.174 0/0:79:79,0:79:3115:0:0:0,-23.7814,-280.431 0/0:51:51,0:51:2036:0:0:0,-15.3525,-183.432 0/0:36:36,0:36:1425:0:0:0,-10.8371,-128.506 0/1:19:15,4:15:593:4:163:-9.33886,0,-47.9877 0/0:1:1,0:1:38:0:0:0,-0.30103,-3.79727 dDocent_Contig_12267 16 . G T 51.2659 . AB=0.1;ABP=155.882;AC=1;AF=0.0833333;AN=12;AO=26;CIGAR=1X;DP=833;DPB=833;DPRA=0.941096;EPP=59.4686;EPPR=1711.97;GTI=0;LEN=1;MEANALT=1.6;MQM=60;MQMR=59.9949;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.576923;PAIREDR=0.615676;PAO=0;PQA=0;PQR=0;PRO=0;QA=1009;QR=31155;RO=791;RPL=0;RPP=59.4686;RPPR=1720.64;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=790;SRP=1711.97;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:121:115,6:115:4550:6:211:0,-17.1044,-390.136 0/0:228:220,2:220:8576:2:80:0,-59.6339,-763.855 0/0:146:142,0:142:5593:0:0:0,-42.7463,-502.875 0/0:149:139,5:139:5490:5:197:0,-25.6414,-475.85 0/0:79:77,2:77:3086:2:82:0,-16.0017,-270.041 0/1:110:98,11:98:3860:11:439:-6.64947,0,-314.2 dDocent_Contig_12268 43 . A G 135.273 . AB=0.26087;ABP=14.4341;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=157;DPB=157;DPRA=0.858209;EPP=16.0391;EPPR=330.903;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.523179;PAO=0;PQA=0;PQR=0;PRO=0;QA=240;QR=5937;RO=151;RPL=0;RPP=16.0391;RPPR=330.903;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=151;SRP=330.903;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:906:0:0:0,-6.92369,-81.8465 0/0:30:30,0:30:1191:0:0:0,-9.0309,-107.469 0/0:13:13,0:13:526:0:0:0,-3.91339,-47.6874 0/1:23:17,6:17:653:6:240:-15.0502,0,-52.1761 0/0:35:35,0:35:1361:0:0:0,-10.536,-122.749 0/0:33:33,0:33:1300:0:0:0,-9.93399,-117.266 dDocent_Contig_12269 22 . T A 1286.56 . AB=0.183463;ABP=339.813;AC=4;AF=0.4;AN=10;AO=73;CIGAR=1X;DP=488;DPB=488;DPRA=0;EPP=161.528;EPPR=904.171;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0.986301;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2838;QR=16279;RO=415;RPL=0;RPP=161.528;RPPR=904.171;RPR=73;RUN=1;SAF=73;SAP=161.528;SAR=0;SRF=415;SRP=904.171;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:97:72,25:72:2763:25:983:-59.5725,0,-219.592 0/1:164:132,32:132:5236:32:1256:-63.9513,0,-421.736 0/1:121:108,13:108:4217:13:510:-9.82173,0,-343.077 0/0:101:99,2:99:3900:2:48:0,-25.8466,-346.453 ./.:.:.:.:.:.:.:. 0/1:5:4,1:4:163:1:41:-2.58942,0,-13.5533 dDocent_Contig_12270 163 . A G 67.5379 . AB=0.166667;ABP=43.5445;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=109;DPB=109;DPRA=2.03704;EPP=12.7819;EPPR=117.582;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.875;PAIREDR=0.920792;PAO=0;PQA=0;PQR=0;PRO=0;QA=264;QR=3641;RO=101;RPL=7;RPP=12.7819;RPPR=117.582;RPR=1;RUN=1;SAF=0;SAP=20.3821;SAR=8;SRF=0;SRP=222.329;SRR=101;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:773:0:0:0,-6.32163,-69.8912 0/0:8:8,0:8:290:0:0:0,-2.40824,-26.4429 0/0:6:6,0:6:197:0:0:0,-1.80618,-18.0499 0/0:13:12,1:12:436:1:35:0,-0.414761,-36.0791 0/0:19:19,0:19:675:0:0:0,-5.71957,-61.0683 0/1:42:35,7:35:1270:7:229:-8.27637,0,-101.946 dDocent_Contig_12271 32 . G A 16480.6 . AB=0.347943;ABP=227.538;AC=7;AF=0.583333;AN=12;AO=402;CIGAR=1X3M;DP=1285;DPB=1285;DPRA=0;EPP=875.942;EPPR=1449.21;GTI=0;LEN=1;MEANALT=2.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.813433;PAIREDR=0.921922;PAO=0;PQA=0;PQR=0;PRO=0;QA=15623;QR=25115;RO=666;RPL=0;RPP=875.942;RPPR=1449.21;RPR=402;RUN=1;SAF=402;SAP=875.942;SAR=0;SRF=666;SRP=1449.21;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:270:178,3,89:178:6691:3,89:116,3459:-230.634,-274.691,-821.922,0,-538.605,-521.34 0|1:285:179,2,103:179:6760:2,103:64,3950:-270.413,-319.146,-872.569,0,-549.007,-523.153 0|1:261:187,2,70:187:7020:2,70:70,2750:-169.982,-220.581,-794.981,0,-569.405,-554.028 0|1:206:96,0,109:96:3653:0,109:0,4248:-320.232,-349.131,-648.725,0,-299.598,-266.786 1|1:167:7,146,13:7:267:146,13:5653,516:-484.288,-22.0506,0,-443.916,-1.4601,-461.906 0|1:96:19,58,18:19:724:58,18:2279,700:-181.732,0,-41.9232,-129.931,-1.85803,-183.896 dDocent_Contig_12272 37 . C T 94.5333 . AB=0.294118;ABP=9.26925;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=473;DPB=473;DPRA=0.186404;EPP=13.8677;EPPR=1019.26;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.925214;PAO=0;PQA=0;PQR=0;PRO=0;QA=175;QR=15975;RO=468;RPL=0;RPP=13.8677;RPPR=1019.26;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=468;SRP=1019.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:146:146,0:146:4962:0:0:0,-43.9504,-446.762 0/0:68:68,0:68:2328:0:0:0,-20.47,-209.787 0/0:86:86,0:86:2961:0:0:0,-25.8886,-266.737 0/0:151:151,0:151:5140:0:0:0,-45.4555,-462.771 0/1:17:12,5:12:409:5:175:-10.9762,0,-32.0204 0/0:5:5,0:5:175:0:0:0,-1.50515,-16.0937 dDocent_Contig_12273 9 . G A 3670.67 . AB=0.462428;ABP=5.13156;AC=8;AF=0.666667;AN=12;AO=124;CIGAR=1X;DP=217;DPB=217;DPRA=0;EPP=272.273;EPPR=204.957;GTI=0;LEN=1;MEANALT=1;MQM=58.8548;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.798387;PAIREDR=0.978495;PAO=0;PQA=0;PQR=0;PRO=0;QA=4736;QR=3542;RO=93;RPL=0;RPP=272.273;RPPR=204.957;RPR=124;RUN=1;SAF=124;SAP=272.273;SAR=0;SRF=93;SRP=204.957;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:56:30,26:30:1144:26:983:-71.2908,0,-86.4007 0/1:35:18,17:18:677:17:650:-47.4243,0,-50.7227 0/1:55:32,23:32:1228:23:877:-62.6901,0,-94.2574 0/1:27:13,14:13:493:14:538:-40.6365,0,-36.5867 1/1:17:0,17:0:0:17:659:-59.3296,-5.11751,0 1/1:27:0,27:0:0:27:1029:-92.9178,-8.12781,0 dDocent_Contig_12274 16 . G A 293.82 . AB=0.266667;ABP=24.2907;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1X;DP=369;DPB=369;DPRA=0.64;EPP=44.2683;EPPR=763.026;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8857;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=753;QR=13895;RO=350;RPL=0;RPP=44.2683;RPPR=763.026;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=350;SRP=763.026;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:65:65,0:65:2558:0:0:0,-19.5669,-230.266 0/0:70:64,6:64:2556:6:222:0,-0.743117,-209.85 0/0:29:28,1:28:1126:1:41:0,-4.6353,-97.525 0/1:45:33,12:33:1306:12:490:-30.9048,0,-104.259 0/0:83:83,0:83:3312:0:0:0,-24.9855,-298.136 0/0:77:77,0:77:3037:0:0:0,-23.1793,-273.416 dDocent_Contig_12275 57 . A C 515.313 . AB=0.174699;ABP=155.589;AC=2;AF=0.166667;AN=12;AO=54;CIGAR=1X;DP=566;DPB=566;DPRA=0;EPP=120.27;EPPR=1114.8;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.592593;PAIREDR=0.992188;PAO=0;PQA=0;PQR=0;PRO=0;QA=2139;QR=20044;RO=512;RPL=54;RPP=120.27;RPPR=1114.8;RPR=0;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=512;SRP=1114.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:88:81,7:81:3191:7:279:0,-1.00986,-261.795 0/1:68:59,9:59:2286:9:362:-12.4741,0,-185.448 0/0:64:60,4:60:2317:4:143:0,-6.04793,-195.487 0/0:100:98,2:98:3785:2:82:0,-22.3233,-332.888 0/0:148:136,12:136:5363:12:479:0,-1.0935,-439.076 0/1:98:78,20:78:3102:20:794:-42.2789,0,-249.763 dDocent_Contig_12277 10 . C G 1223.55 . AB=0.613333;ABP=11.3777;AC=2;AF=0.2;AN=10;AO=46;CIGAR=2X;DP=136;DPB=136;DPRA=1.84426;EPP=102.898;EPPR=196.271;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.921348;PAO=0;PQA=0;PQR=0;PRO=0;QA=1640;QR=3559;RO=89;RPL=0;RPP=102.898;RPPR=196.271;RPR=46;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=89;SRP=196.271;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:41:21,20:21:843:20:708:-51.6954,0,-63.8424 0|0:23:23,0:23:917:0:0:0,-6.92369,-82.8352 0|0:33:32,0:32:1287:0:0:0,-9.63296,-115.699 0|1:34:8,26:8:317:26:932:-73.9602,0,-18.6611 0|0:5:5,0:5:195:0:0:0,-1.50515,-17.9219 .:.:.:.:.:.:.:. dDocent_Contig_12278 10 . C T 515.895 . AB=0.180233;ABP=155.771;AC=2;AF=0.166667;AN=12;AO=39;CIGAR=1X;DP=430;DPB=430;DPRA=1.43694;EPP=87.6977;EPPR=852.056;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.974359;PAIREDR=0.913043;PAO=0;PQA=0;PQR=0;PRO=0;QA=1482;QR=15511;RO=391;RPL=0;RPP=87.6977;RPPR=852.056;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=391;SRP=852.056;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:64:64,0:64:2559:0:0:0,-19.2659,-230.447 0/1:96:80,16:80:3201:16:605:-25.8862,0,-259.263 0/0:47:47,0:47:1849:0:0:0,-14.1484,-166.614 0/0:87:83,4:83:3287:4:153:0,-12.0497,-281.759 0/1:76:61,15:61:2419:15:572:-28.9251,0,-194.988 0/0:60:56,4:56:2196:4:152:0,-4.01443,-183.763 dDocent_Contig_12279 29 . A T 2046.21 . AB=0.0961098;ABP=622.198;AC=1;AF=0.0833333;AN=12;AO=42;CIGAR=6M1I1X11M;DP=437;DPB=462.333;DPRA=0;EPP=94.2121;EPPR=602.337;GTI=0;LEN=1;MEANALT=4.16667;MQM=52.0952;MQMR=60;NS=6;NUMALT=4;ODDS=5.55112e-17;PAIRED=0;PAIREDR=0.945652;PAO=0;PQA=0;PQR=0;PRO=0;QA=1672;QR=10786;RO=276;RPL=0;RPP=94.2121;RPPR=602.337;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=276;SRP=602.337;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:77:39,11,13,0,13:39:1530:11,13,0,13:445,482,0,529:-31.9042,-7.28531,-129.8,-4.23334,-93.6937,-126.137,-43.6444,-133.111,-130.05,-169.468,0,-89.4702,-86.4106,-125.828,-121.915 0|1:120:93,14,4,5,2:93:3646:14,4,5,2:559,146,196,82:-17.6575,0,-295.62,-33.7324,-287.911,-332.352,-29.5361,-283.718,-317.439,-327.858,-38.8834,-293.066,-326.787,-322.595,-338.109 0|0:64:50,4,5,3,0:50:1951:4,5,3,0:159,190,120,0:-0.533877,-3.11061,-162.297,0,-147.921,-158.887,-5.69219,-153.615,-150.506,-165.183,-15.5854,-163.501,-160.392,-166.086,-175.972 0|0:81:47,5,27,0,0:47:1804:5,27,0,0:191,1085,0,0:-75.2795,-73.7916,-220.339,0,-132.426,-139.937,-89.4279,-221.844,-148.065,-237.482,-89.4279,-221.844,-148.065,-237.482,-237.482 0|0:20:7,4,9,0,0:7:277:4,9,0,0:159,314,0,0:-23.3926,-12.8519,-34.4662,0,-10.1719,-20.0956,-25.4998,-35.6703,-22.8049,-48.3102,-25.4998,-35.6703,-22.8049,-48.3102,-48.3102 0|0:75:40,4,24,6,0:40:1578:4,24,6,0:159,944,236,0:-65.6068,-64.6596,-193.294,0,-116.849,-122.613,-58.2355,-175.085,-110.425,-186.268,-77.648,-194.498,-129.837,-188.074,-207.486 dDocent_Contig_12280 22 . G T 2207.46 . AB=0.459302;ABP=5.48477;AC=2;AF=0.166667;AN=12;AO=79;CIGAR=1X;DP=244;DPB=244;DPRA=4.77778;EPP=174.557;EPPR=295.185;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=58.303;NS=6;NUMALT=1;ODDS=0;PAIRED=0.987342;PAIREDR=0.878788;PAO=0;PQA=0;PQR=0;PRO=0;QA=3058;QR=6368;RO=165;RPL=0;RPP=174.557;RPPR=361.303;RPR=79;RUN=1;SAF=79;SAP=174.557;SAR=0;SRF=157;SRP=295.185;SRR=8;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:265:0:0:0,-2.10721,-22.3628 0/0:14:14,0:14:548:0:0:0,-4.21442,-48.2463 0/0:13:13,0:13:504:0:0:0,-3.91339,-45.7011 0/0:38:38,0:38:1474:0:0:0,-11.4391,-132.924 0/1:108:63,45:63:2414:45:1749:-125.141,0,-180.575 0/1:64:30,34:30:1163:34:1309:-98.8262,0,-85.327 dDocent_Contig_12281 9 . G A 75.9103 . AB=0.140845;ABP=82.5596;AC=5;AF=0.416667;AN=12;AO=10;CIGAR=1X;DP=81;DPB=81;DPRA=1.42;EPP=24.725;EPPR=157.185;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.9;PAIREDR=0.84507;PAO=0;PQA=0;PQR=0;PRO=0;QA=378;QR=2752;RO=71;RPL=0;RPP=24.725;RPPR=157.185;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=71;SRP=157.185;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:19,2:19:737:2:78:-1.08184,0,-60.3396 0/1:26:22,4:22:854:4:148:-5.85433,0,-69.3556 0/1:7:5,2:5:193:2:74:-4.91822,0,-15.6341 0/1:8:7,1:7:272:1:39:-1.48832,0,-22.439 0/0:10:10,0:10:388:0:0:0,-3.0103,-35.2779 0/1:9:8,1:8:308:1:39:-1.18729,0,-25.3725 dDocent_Contig_12283 22 . C T 937.803 . AB=0.117647;ABP=89.3583;AC=6;AF=0.5;AN=12;AO=38;CIGAR=1X;DP=159;DPB=159;DPRA=1.31429;EPP=85.5263;EPPR=265.758;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.983471;PAO=0;PQA=0;PQR=0;PRO=0;QA=1406;QR=4777;RO=121;RPL=0;RPP=85.5263;RPPR=265.758;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=121;SRP=265.758;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:46:41,5:41:1578:5:187:-3.34518,0,-128.399 0/1:22:19,3:19:730:3:115:-4.10207,0,-59.3893 0/0:21:21,0:21:856:0:0:0,-6.32163,-77.3494 0/0:41:39,2:39:1572:2:71:0,-5.60115,-134.97 1/1:11:0,11:0:0:11:422:-38.3327,-3.31133,0 1/1:18:1,17:1:41:17:611:-51.2184,-1.32397,0 dDocent_Contig_12284 19 . A C 983.209 . AB=0.279221;ABP=68.2109;AC=5;AF=0.416667;AN=12;AO=45;CIGAR=1X;DP=190;DPB=190;DPRA=0;EPP=100.727;EPPR=309.248;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.986207;PAO=0;PQA=0;PQR=0;PRO=0;QA=1769;QR=5810;RO=145;RPL=0;RPP=100.727;RPPR=317.874;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=144;SRP=309.248;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:34,2:34:1344:2:79:0,-3.33945,-113.714 0/1:37:25,12:25:996:12:473:-31.7788,0,-78.7977 0/1:27:19,8:19:764:8:326:-21.5821,0,-60.9523 0/1:26:13,13:13:526:13:507:-38.1395,0,-39.8602 0/1:28:25,3:25:1016:3:123:-3.03595,0,-83.3033 0/1:36:29,7:29:1164:7:261:-12.9999,0,-94.1969 dDocent_Contig_12285 7 . C A 482.031 . AB=0.372549;ABP=10.206;AC=2;AF=0.166667;AN=12;AO=26;CIGAR=2X;DP=212;DPB=212;DPRA=1.08485;EPP=59.4686;EPPR=406.904;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0;PAIREDR=0.419355;PAO=0;PQA=0;PQR=0;PRO=0;QA=1003;QR=7072;RO=186;RPL=0;RPP=59.4686;RPPR=406.904;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=186;SRP=406.904;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:31:30,1:30:1129:1:38:0,-5.53466,-98.1158 0|0:34:33,1:33:1258:1:37:0,-6.53719,-109.816 0|0:33:33,0:33:1265:0:0:0,-9.93399,-114.143 0|0:63:58,5:58:2186:5:194:0,-1.13204,-179.136 0|1:13:6,7:6:232:7:270:-20.7523,0,-17.3357 0|1:38:26,12:26:1002:12:464:-30.6726,0,-79.053 dDocent_Contig_12286 197 . G C 43.7427 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=223;DPB=223;DPRA=1.64423;EPP=22.5536;EPPR=467.705;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.990654;PAO=0;PQA=0;PQR=0;PRO=0;QA=351;QR=8158;RO=214;RPL=9;RPP=22.5536;RPPR=467.705;RPR=0;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=467.705;SRR=214;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:50,0:50:1887:0:0:0,-15.0515,-170.071 0/0:67:65,2:65:2480:2:78:0,-12.7655,-215.99 0/0:53:49,4:49:1872:4:156:0,-1.5373,-154.305 0/0:50:48,2:48:1841:2:78:0,-7.64803,-158.535 0/0:2:2,0:2:78:0:0:0,-0.60206,-7.40347 1/1:1:0,1:0:0:1:39:-3.89656,-0.30103,0 dDocent_Contig_12287 11 . T A 1196.1 . AB=0.218254;ABP=176.763;AC=5;AF=0.416667;AN=12;AO=55;CIGAR=2M1X;DP=260;DPB=260;DPRA=6.3;EPP=122.441;EPPR=413.419;GTI=0;LEN=1;MEANALT=1.8;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2214;QR=7373;RO=189;RPL=0;RPP=122.441;RPPR=413.419;RPR=55;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=189;SRP=413.419;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:79:52,4,5,18:52:2042:4,5,18:158,199,730:-44.5527,-47.2056,-213.942,-43.8211,-198.76,-210.257,0,-154.943,-151.559,-162.527 0|1:57:47,0,0,10:47:1849:0,0,10:0,0,398:-19.0206,-33.169,-185.266,-33.169,-185.266,-185.266,0,-152.494,-152.494,-149.483 0|1:72:53,6,0,13:53:2058:6,0,13:218,0,522:-27.0813,-25.246,-192.523,-43.0359,-194.329,-212.129,0,-151.317,-169.116,-165.203 0|1:28:16,1,0,11:16:609:1,0,11:38,0,444:-31.8063,-33.5082,-83.1346,-36.6228,-83.4356,-86.5518,0,-46.8249,-49.9414,-46.6301 0|0:8:8,0,0,0:8:309:0,0,0:0,0,0:0,-2.40824,-28.1712,-2.40824,-28.1712,-28.1712,-2.40824,-28.1712,-28.1712,-28.1712 0|1:16:13,0,0,3:13:506:0,0,3:0,0,120:-6.37083,-10.2842,-51.8608,-10.2842,-51.8608,-51.8608,0,-41.9741,-41.9741,-41.0711 dDocent_Contig_12288 106 . N G 135.374 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=5;CIGAR=2X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=29.6;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=168;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:4:0,4:0:0:4:133:-10.2803,-1.20412,0 1|1:1:0,1:0:0:1:35:-2.95456,-0.30103,0 dDocent_Contig_12289 51 . T C 4310.91 . AB=0.704403;ABP=60.7114;AC=4;AF=0.4;AN=10;AO=146;CIGAR=1X;DP=271;DPB=271;DPRA=4.26667;EPP=320.045;EPPR=274.444;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5553;QR=4547;RO=125;RPL=146;RPP=320.045;RPPR=274.444;RPR=0;RUN=1;SAF=146;SAP=320.045;SAR=0;SRF=125;SRP=274.444;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:69:63,6:63:2279:6:202:0,-2.26993,-186.848 0/0:15:15,0:15:526:0:0:0,-4.51545,-47.6638 0/1:75:24,51:24:908:51:1884:-147.182,0,-59.4585 0/1:84:23,61:23:834:61:2357:-187.02,0,-50.0899 1/1:28:0,28:0:0:28:1110:-100.19,-8.42884,0 ./.:.:.:.:.:.:.:. dDocent_Contig_12291 32 . C T 399.536 . AB=0.2375;ABP=50.8913;AC=3;AF=0.25;AN=12;AO=26;CIGAR=1X;DP=272;DPB=272;DPRA=1.23158;EPP=59.4686;EPPR=537.193;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.743902;PAO=0;PQA=0;PQR=0;PRO=0;QA=1040;QR=9756;RO=246;RPL=0;RPP=59.4686;RPPR=537.193;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=246;SRP=537.193;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:95:91,4:91:3623:4:160:0,-13.8144,-311.317 0/0:59:56,3:56:2216:3:123:0,-6.29598,-188.148 0/1:20:15,5:15:600:5:203:-12.6322,0,-48.3153 0/1:38:34,4:34:1337:4:151:-2.51603,0,-109.152 0/1:22:12,10:12:472:10:403:-30.0056,0,-36.2077 0/0:38:38,0:38:1508:0:0:0,-11.4391,-135.956 dDocent_Contig_12292 19 . A G 1103.12 . AB=0.271186;ABP=83.502;AC=6;AF=0.5;AN=12;AO=48;CIGAR=1X;DP=177;DPB=177;DPRA=0;EPP=107.241;EPPR=283.13;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.3125;PAIREDR=0.472868;PAO=0;PQA=0;PQR=0;PRO=0;QA=1918;QR=5151;RO=129;RPL=0;RPP=107.241;RPPR=283.13;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=129;SRP=283.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:18,7:18:729:7:284:-18.4082,0,-58.409 0/1:18:10,8:10:398:8:325:-24.2009,0,-30.7574 0/1:43:32,11:32:1261:11:439:-26.9201,0,-100.811 0/1:49:36,13:36:1450:13:515:-31.9434,0,-115.998 0/1:17:13,4:13:512:4:164:-10.0324,0,-41.3041 0/1:25:20,5:20:801:5:191:-10.0288,0,-64.882 dDocent_Contig_12293 9 . G T 937.708 . AB=0.282051;ABP=35.1926;AC=3;AF=0.25;AN=12;AO=35;CIGAR=1X;DP=241;DPB=241;DPRA=1.21333;EPP=79.0118;EPPR=450.334;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.975728;PAO=0;PQA=0;PQR=0;PRO=0;QA=1309;QR=7784;RO=206;RPL=0;RPP=79.0118;RPPR=450.334;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=206;SRP=450.334;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:254:0:0:0,-2.10721,-23.2079 0/0:63:63,0:63:2368:0:0:0,-18.9649,-213.33 0/0:32:32,0:32:1186:0:0:0,-9.63296,-107.034 0/0:48:48,0:48:1845:0:0:0,-14.4494,-166.299 1/1:13:0,13:0:0:13:506:-45.8893,-3.91339,0 0/1:78:56,22:56:2131:22:803:-49.1033,0,-168.541 dDocent_Contig_12294 31 . C A 38.2719 . AB=0.12;ABP=65.7224;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=119;DPB=119;DPRA=1.44928;EPP=16.0391;EPPR=248.387;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.666667;PAIREDR=0.477876;PAO=0;PQA=0;PQR=0;PRO=0;QA=237;QR=4496;RO=113;RPL=0;RPP=16.0391;RPPR=248.387;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=113;SRP=248.387;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:925:0:0:0,-6.92369,-83.5543 0/0:24:24,0:24:954:0:0:0,-7.22472,-86.1566 0/1:25:22,3:22:891:3:115:-3.19663,0,-72.9703 0/0:13:13,0:13:512:0:0:0,-3.91339,-46.4254 0/1:25:22,3:22:848:3:122:-3.84674,0,-69.0944 0/0:9:9,0:9:366:0:0:0,-2.70927,-33.3052 dDocent_Contig_12295 59 . T C 313.491 . AB=0.258065;ABP=34.5317;AC=5;AF=0.416667;AN=12;AO=16;CIGAR=2X;DP=70;DPB=70;DPRA=1.55;EPP=37.7539;EPPR=120.27;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=632;QR=2031;RO=54;RPL=16;RPP=37.7539;RPPR=120.27;RPR=0;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=54;SRP=120.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:8:7,1:7:266:1:40:-1.58744,0,-21.8939 0|1:9:7,2:7:268:2:79:-4.78836,0,-21.7745 0|1:28:22,6:22:811:6:240:-13.547,0,-64.8769 0|1:8:4,4:4:154:4:156:-12.0075,0,-11.8246 0|1:9:6,3:6:220:3:117:-8.20094,0,-17.4449 0|0:8:8,0:8:312:0:0:0,-2.40824,-28.4446 dDocent_Contig_12296 9 . G T 268.678 . AB=0.407407;ABP=5.02092;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=128;DPB=128;DPRA=1.33663;EPP=26.8965;EPPR=257.073;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.880342;PAO=0;PQA=0;PQR=0;PRO=0;QA=402;QR=4497;RO=117;RPL=0;RPP=26.8965;RPPR=257.073;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=117;SRP=257.073;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:34,0:34:1300:0:0:0,-10.235,-117.29 0/0:41:41,0:41:1585:0:0:0,-12.3422,-142.917 0/0:15:15,0:15:583:0:0:0,-4.51545,-52.8131 0/0:9:9,0:9:335:0:0:0,-2.70927,-30.5 0/1:27:16,11:16:616:11:402:-28.3905,0,-47.6517 0/0:2:2,0:2:78:0:0:0,-0.60206,-7.40347 dDocent_Contig_12297 5 . T A 49.9351 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=2;CIGAR=8I1X3M1X;DP=6;DPB=9.2;DPRA=1;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=24;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=73;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:2:0,0:0:0:0:0:0,0,0 1|1:2:0,0:0:0:0:0:0,0,0 1|1:2:0,2:0:0:2:73:-4.51476,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_12298 59 . T G 586.486 . AB=0.206897;ABP=111.21;AC=2;AF=0.166667;AN=12;AO=34;CIGAR=1X;DP=397;DPB=397;DPRA=1.11382;EPP=76.8404;EPPR=791.255;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.988981;PAO=0;PQA=0;PQR=0;PRO=0;QA=1313;QR=14458;RO=363;RPL=34;RPP=76.8404;RPPR=791.255;RPR=0;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=363;SRP=791.255;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:52:51,1:51:2010:1:41:0,-11.559,-176.998 0/0:79:79,0:79:3133:0:0:0,-23.7814,-282.047 0/0:44:44,0:44:1772:0:0:0,-13.2453,-159.696 0/0:77:74,3:74:2977:3:107:0,-13.1988,-258.033 0/1:86:69,17:69:2729:17:655:-33.3872,0,-219.832 0/1:59:46,13:46:1837:13:510:-28.4833,0,-147.78 dDocent_Contig_12299 9 . G T 369.16 . AB=0.152941;ABP=180.867;AC=5;AF=0.416667;AN=12;AO=29;CIGAR=1X;DP=268;DPB=268;DPRA=0.664516;EPP=65.983;EPPR=521.992;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.931034;PAIREDR=0.899582;PAO=0;PQA=0;PQR=0;PRO=0;QA=1099;QR=9096;RO=239;RPL=0;RPP=65.983;RPPR=521.992;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=239;SRP=521.992;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:89:79,10:79:2981:10:371:-6.9435,0,-241.663 0/0:62:62,0:62:2381:0:0:0,-18.6639,-214.495 0/0:35:33,2:33:1263:2:78:0,-3.13258,-106.559 0/1:77:62,15:62:2355:15:577:-29.0918,0,-188.979 1/1:1:0,1:0:0:1:33:-3.29913,-0.30103,0 0/1:4:3,1:3:116:1:40:-2.79156,0,-9.61358 dDocent_Contig_12300 105 . A T 1841.54 . AB=0.457143;ABP=5.24381;AC=8;AF=0.666666;AN=12;AO=64;CIGAR=3M1X1M1X;DP=140;DPB=135.333;DPRA=0;EPP=141.985;EPPR=102.898;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.84375;PAIREDR=0.847826;PAO=0;PQA=0;PQR=0;PRO=0;QA=2273;QR=1577;RO=46;RPL=0;RPP=141.985;RPPR=102.898;RPR=64;RUN=1;SAF=0;SAP=141.985;SAR=64;SRF=0;SRP=102.898;SRR=46;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:16:6,6,2:6:213:6,2:213,70:-15.6362,0,-15.6362,-11.734,-11.734,-28.5179 0|1:20:12,5,3:12:402:5,3:180,100:-11.0914,0,-31.0522,-6.62015,-24.4641,-38.2555 1|1:31:6,6,19:6:210:6,19:212,679:-53.7415,-38.283,-53.5612,-0.18287,0,-11.5478 0|1:33:14,7,12:14:478:7,12:251,424:-30.3134,-14.0537,-50.7303,0,-18.3009,-35.1665 1|1:13:2,4,7:2:68:4,7:131,247:-24.5809,-14.6102,-18.9192,-5.05348,0,-8.46642 0|1:27:6,0,21:6:206:0,21:0,753:-59.9672,-61.7734,-78.4974,0,-17.0706,-10.749 dDocent_Contig_12301 16 . G T 64.6937 . AB=0.136364;ABP=53.5464;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=167;DPB=167;DPRA=0.715447;EPP=16.0391;EPPR=294.46;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.0435;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.956522;PAO=0;PQA=0;PQR=0;PRO=0;QA=236;QR=6444;RO=161;RPL=0;RPP=16.0391;RPPR=352.617;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=154;SRP=294.46;SRR=7;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:812:0:0:0,-6.0206,-73.3951 0/0:35:35,0:35:1408:0:0:0,-10.536,-126.967 0/1:11:10,1:10:406:1:41:-0.783237,0,-33.5887 0/1:33:28,5:28:1125:5:195:-7.98788,0,-91.6003 0/0:29:29,0:29:1162:0:0:0,-8.72987,-104.86 0/0:39:39,0:39:1531:0:0:0,-11.7402,-136.981 dDocent_Contig_12302 9 . C A 4903.98 . AB=0.444712;ABP=14.0556;AC=4;AF=0.333333;AN=12;AO=186;CIGAR=1X;DP=454;DPB=454;DPRA=5.14118;EPP=406.904;EPPR=584.965;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.887097;PAIREDR=0.977612;PAO=0;PQA=0;PQR=0;PRO=0;QA=6948;QR=10158;RO=268;RPL=0;RPP=406.904;RPPR=584.965;RPR=186;RUN=1;SAF=186;SAP=406.904;SAR=0;SRF=268;SRP=584.965;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:77:45,32:45:1702:32:1212:-86.1958,0,-130.26 0/1:114:57,57:57:2185:57:2117:-156.443,0,-162.559 0/1:82:42,40:42:1601:40:1504:-110.951,0,-119.667 0/1:143:87,56:87:3270:56:2076:-144.03,0,-251.395 0/0:17:17,0:17:645:0:0:0,-5.11751,-58.3838 0/0:21:20,1:20:755:1:39:0,-2.42507,-64.3782 dDocent_Contig_12303 98 . N C 64.5896 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=68;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:68:-6.45788,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12304 30 . C T 51.2581 . AB=0.130435;ABP=57.5803;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=169;DPB=169;DPRA=0.747967;EPP=16.0391;EPPR=354.789;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=238;QR=6511;RO=162;RPL=0;RPP=16.0391;RPPR=354.789;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=162;SRP=354.789;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:16,3:16:648:3:117:-5.19034,0,-52.9334 0/1:27:24,3:24:966:3:121:-3.15218,0,-79.112 0/0:5:5,0:5:190:0:0:0,-1.50515,-17.4638 0/0:7:7,0:7:282:0:0:0,-2.10721,-25.753 0/0:66:65,0:65:2637:0:0:0,-19.5669,-237.032 0/0:45:45,0:45:1788:0:0:0,-13.5463,-161.133 dDocent_Contig_12305 85 . T C 40.5011 . AB=0.666667;ABP=3.73412;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=1X;DP=94;DPB=94;DPRA=0.164835;EPP=3.0103;EPPR=202.786;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.956522;PAO=0;PQA=0;PQR=0;PRO=0;QA=68;QR=3166;RO=92;RPL=2;RPP=7.35324;RPPR=202.786;RPR=0;RUN=1;SAF=1;SAP=3.0103;SAR=1;SRF=92;SRP=202.786;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:412:0:0:0,-3.61236,-37.4098 0/0:13:13,0:13:437:0:0:0,-3.91339,-39.652 0/0:20:20,0:20:698:0:0:0,-6.0206,-63.1447 0/0:2:2,0:2:69:0:0:0,-0.60206,-6.55266 0/0:44:44,0:44:1515:0:0:0,-13.2453,-136.643 0/1:3:1,2:1:35:2:68:-5.55479,0,-2.59554 dDocent_Contig_12307 13 . C T 164.787 . AB=0.0714286;ABP=114.686;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=3M2X7M;DP=792;DPB=791.667;DPRA=0.657895;EPP=39.9253;EPPR=1496.98;GTI=0;LEN=1;MEANALT=5.25;MQM=57.2941;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=673;QR=26789;RO=688;RPL=0;RPP=39.9253;RPPR=1496.98;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=688;SRP=1496.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:30:18,8,0,0,0,1:18:708:8,0,0,0,1:316,0,0,0,39:-15.4777,0,-55.9989,-20.8963,-58.4071,-79.2053,-20.8963,-58.4071,-79.2053,-79.2053,-20.8963,-58.4071,-79.2053,-79.2053,-79.2053,-17.681,-55.2004,-75.9988,-75.9988,-75.9988,-75.6977 0|0:80:65,1,0,5,0,3:65:2547:1,0,5,0,3:39,0,198,0,119:0,-16.7816,-226.027,-19.5669,-226.328,-229.108,-9.99186,-216.749,-219.529,-218.023,-19.5669,-226.328,-229.108,-219.529,-229.108,-9.74213,-216.533,-219.313,-209.734,-219.313,-218.41 0|1:40:30,1,0,0,4,4:30:1175:1,0,0,4,4:39,0,0,155,161:-4.22028,-10.4711,-106.823,-13.2512,-107.124,-109.904,-13.2512,-107.124,-109.904,-109.904,-1.53624,-95.4222,-98.2013,-98.2013,-96.9972,0,-93.9091,-96.6884,-96.6884,-84.986,-95.4842 0|0:46:39,1,2,3,0,0:39:1542:1,2,3,0,0:38,79,111,0,0:0,-8.97878,-135.71,-6.53529,-130.834,-132.979,-5.74803,-130.026,-127.596,-131.869,-11.7402,-136.011,-133.581,-132.773,-138.758,-11.7402,-136.011,-133.581,-132.773,-138.758,-138.758 0|0:300:268,0,18,0,0,9:268:10378:0,18,0,0,9:0,711,0,0,354:0,-80.676,-933.223,-35.2069,-887.753,-882.334,-80.676,-933.223,-887.753,-933.223,-80.676,-933.223,-887.753,-933.223,-933.223,-51.6104,-904.186,-858.716,-904.186,-904.186,-901.477 0|0:296:268,0,3,0,0,0:268:10439:0,3,0,0,0:0,118,0,0,0:0,-80.676,-938.706,-72.9132,-930.946,-930.043,-80.676,-938.706,-930.946,-938.706,-80.676,-938.706,-930.946,-938.706,-938.706,-80.676,-938.706,-930.946,-938.706,-938.706,-938.706 dDocent_Contig_12308 7 . C T 7632.07 . AB=0.665414;ABP=66.2279;AC=8;AF=0.666667;AN=12;AO=244;CIGAR=1X3M1X;DP=334;DPB=334;DPRA=0;EPP=532.85;EPPR=194.1;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.00409836;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9437;QR=3350;RO=88;RPL=0;RPP=532.85;RPPR=194.1;RPR=244;RUN=1;SAF=244;SAP=532.85;SAR=0;SRF=88;SRP=194.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:47:9,38:9:343:38:1469:-118.337,0,-17.0787 0|1:111:40,71:40:1503:71:2755:-214.712,0,-102.125 0|1:73:25,47:25:967:47:1807:-140.807,0,-65.2698 0|1:35:14,21:14:537:21:807:-62.4189,0,-38.138 1|1:24:0,23:0:0:23:894:-80.4468,-6.92369,0 1|1:44:0,44:0:0:44:1705:-153.707,-13.2453,0 dDocent_Contig_12309 43 . T C 342.993 . AB=0.153333;ABP=159.588;AC=6;AF=0.5;AN=12;AO=24;CIGAR=1X;DP=158;DPB=158;DPRA=4.31429;EPP=55.1256;EPPR=293.988;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=942;QR=5376;RO=134;RPL=0;RPP=55.1256;RPPR=293.988;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=134;SRP=293.988;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:94:83,11:83:3332:11:433:-11.0249,0,-271.624 0/1:18:14,4:14:559:4:161:-9.45673,0,-45.2344 0/0:7:7,0:7:285:0:0:0,-2.10721,-26.0244 0/1:34:27,7:27:1079:7:270:-14.4283,0,-87.1657 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 0/1:4:3,1:3:121:1:37:-2.49371,0,-10.0761 dDocent_Contig_12310 167 . T C 77.9258 . AB=0.139535;ABP=51.5402;AC=1;AF=0.1;AN=10;AO=6;CIGAR=1X;DP=123;DPB=123;DPRA=2.15;EPP=16.0391;EPPR=143.488;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.6154;NS=5;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.871795;PAO=0;PQA=0;PQR=0;PRO=0;QA=244;QR=4503;RO=117;RPL=6;RPP=16.0391;RPPR=143.488;RPR=0;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=257.073;SRR=117;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 0/0:42:42,0:42:1613:0:0:0,-12.6433,-145.417 0/1:43:37,6:37:1402:6:244:-9.39453,0,-113.482 0/0:17:17,0:17:650:0:0:0,-5.11751,-58.8086 0/0:3:3,0:3:122:0:0:0,-0.90309,-11.3725 0/0:18:18,0:18:716:0:0:0,-5.41854,-64.7633 dDocent_Contig_12312 108 . T G 268.752 . AB=0.233333;ABP=40.0701;AC=3;AF=0.25;AN=12;AO=14;CIGAR=1X;DP=127;DPB=127;DPRA=0.895522;EPP=33.4109;EPPR=246.215;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.714286;PAIREDR=0.696429;PAO=0;PQA=0;PQR=0;PRO=0;QA=545;QR=4476;RO=112;RPL=14;RPP=33.4109;RPPR=246.215;RPR=0;RUN=1;SAF=0;SAP=33.4109;SAR=14;SRF=0;SRP=246.215;SRR=112;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:22,0:22:888:0:0:0,-6.62266,-79.8755 0/1:32:24,8:24:939:8:306:-18.2558,0,-75.1779 0/1:10:8,2:8:323:2:75:-4.10929,0,-26.4283 0/1:18:14,4:14:558:4:164:-9.73136,0,-45.1437 0/0:22:22,0:22:888:0:0:0,-6.62266,-80.2283 0/0:22:22,0:22:880:0:0:0,-6.62266,-79.511 dDocent_Contig_12313 9 . C T 223.427 . AB=0.857143;ABP=18.5208;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=124;DPB=124;DPRA=0.254545;EPP=29.068;EPPR=246.215;GTI=0;LEN=1;MEANALT=1;MQM=27.0833;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.883929;PAO=0;PQA=0;PQR=0;PRO=0;QA=459;QR=4312;RO=112;RPL=0;RPP=29.068;RPPR=246.215;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=112;SRP=246.215;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:32,0:32:1221:0:0:0,-9.63296,-110.185 0/0:35:35,0:35:1345:0:0:0,-10.536,-121.334 0/0:25:25,0:25:970:0:0:0,-7.52575,-87.6133 0/0:18:18,0:18:698:0:0:0,-5.41854,-63.1542 0/1:5:1,4:1:39:4:154:-6.95949,0,-2.39141 0/1:9:1,8:1:39:8:305:-17.7536,0,-1.18729 dDocent_Contig_12314 9 . C A 242.989 . AB=0.116981;ABP=340.687;AC=1;AF=0.0833333;AN=12;AO=42;CIGAR=1X;DP=1616;DPB=1616;DPRA=0.64898;EPP=94.2121;EPPR=3418.74;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9847;NS=6;NUMALT=1;ODDS=0;PAIRED=0.880952;PAIREDR=0.962492;PAO=0;PQA=0;PQR=0;PRO=0;QA=1592;QR=60215;RO=1573;RPL=0;RPP=94.2121;RPPR=3418.74;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=1573;SRP=3418.74;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:260:260,0:260:9877:0:0:0,-78.2678,-888.603 0/0:414:413,0:413:15787:0:0:0,-124.325,-1419.66 0/0:199:198,1:198:7609:1:37:0,-56.2071,-680.936 0/0:306:306,0:306:11766:0:0:0,-92.1152,-1058.37 0/0:172:162,10:162:6199:10:385:0,-16.7709,-522.831 0/1:265:234,31:234:8977:31:1170:-25.8218,0,-727.875 dDocent_Contig_12315 10 . T C 1888.51 . AB=0.37037;ABP=30.596;AC=3;AF=0.25;AN=12;AO=72;CIGAR=1X2M7D8M;DP=426;DPB=396.833;DPRA=0.767857;EPP=159.356;EPPR=760.854;GTI=0;LEN=1;MEANALT=2.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.972222;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2850;QR=13660;RO=349;RPL=0;RPP=159.356;RPPR=760.854;RPR=72;RUN=1;SAF=72;SAP=159.356;SAR=0;SRF=349;SRP=760.854;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:69:66,2:66:2560:2:77:0,-13.563,-223.262 0|0:98:98,0:98:3833:0:0:0,-29.5009,-345.033 0|0:70:70,0:70:2750:0:0:0,-21.0721,-247.648 0|1:85:68,15:68:2660:15:587:-27.7995,0,-214.196 0|1:72:29,41:29:1139:41:1626:-125.163,0,-81.3837 0|1:32:18,14:18:718:14:560:-41.1106,0,-55.3171 dDocent_Contig_12316 32 . G A 431.002 . AB=0.127796;ABP=379.646;AC=5;AF=0.416667;AN=12;AO=41;CIGAR=1X;DP=353;DPB=353;DPRA=0;EPP=92.0407;EPPR=680.51;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.341463;PAIREDR=0.349359;PAO=0;PQA=0;PQR=0;PRO=0;QA=1631;QR=12295;RO=312;RPL=0;RPP=92.0407;RPPR=680.51;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=312;SRP=680.51;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:35,6:35:1373:6:242:-9.81472,0,-111.489 0/1:95:87,8:87:3442:8:318:-0.388241,0,-281.24 0/0:40:39,1:39:1544:1:41:0,-7.94663,-135.107 0/1:61:55,6:55:2174:6:241:-3.70385,0,-177.473 0/1:59:49,10:49:1913:10:403:-18.8687,0,-154.606 0/1:57:47,10:47:1849:10:386:-17.9316,0,-149.467 dDocent_Contig_12317 27 . C A 1159.9 . AB=0.376068;ABP=18.6189;AC=3;AF=0.3;AN=10;AO=44;CIGAR=1X;DP=134;DPB=134;DPRA=4.58824;EPP=98.5551;EPPR=198.443;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=6.93889e-18;PAIRED=0;PAIREDR=0.955556;PAO=0;PQA=0;PQR=0;PRO=0;QA=1728;QR=3582;RO=90;RPL=0;RPP=98.5551;RPPR=198.443;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=90;SRP=198.443;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:8:8,0:8:314:0:0:0,-2.40824,-28.6237 0/1:42:33,9:33:1325:9:327:-17.1199,0,-106.867 0/1:22:16,6:16:640:6:244:-15.716,0,-51.3117 0/1:53:24,29:24:952:29:1157:-88.4554,0,-70.0275 ./.:.:.:.:.:.:.:. 0/0:9:9,0:9:351:0:0:0,-2.70927,-31.946 dDocent_Contig_12318 14 . G A 39097.2 . AB=0.0512374;ABP=5021.56;AC=4;AF=0.333333;AN=12;AO=147;CIGAR=2X4M;DP=2869;DPB=2869;DPRA=0;EPP=322.217;EPPR=189.757;GTI=0;LEN=1;MEANALT=21.1667;MQM=59.7823;MQMR=60;NS=6;NUMALT=7;ODDS=8.88178e-16;PAIRED=0.993197;PAIREDR=0.918605;PAO=0;PQA=0;PQR=0;PRO=0;QA=5767;QR=3325;RO=86;RPL=0;RPP=322.217;RPPR=189.757;RPR=147;RUN=1;SAF=147;SAP=322.217;SAR=0;SRF=86;SRP=189.757;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:544:7,59,18,47,164,107,31,53:7:263:59,18,47,164,107,31,53:2295,695,1842,6370,3862,1223,2035:-805.585,-619.125,-622.908,-750.7,-583.677,-766.826,-690.825,-523.802,-655.377,-698.22,-284.312,-117.286,-248.863,-188.99,-256.487,-501.837,-334.814,-466.39,-406.516,0,-491.171,-707.067,-540.044,-671.62,-611.744,-205.23,-422.756,-719.279,-640.679,-473.655,-605.231,-545.356,-138.84,-356.368,-561.598,-646.268 0|0:693:23,67,29,70,194,96,28,100:23:882:67,29,70,194,96,28,100:2606,1142,2741,7603,3524,1092,3916:-867.838,-660.601,-712.825,-780.874,-639.106,-844.537,-711.684,-569.917,-690.189,-763.004,-249.573,-107.803,-228.077,-158.89,-263.565,-594.876,-453.108,-573.381,-504.192,-42.0783,-638.369,-785.278,-643.51,-763.783,-694.593,-232.481,-577.785,-849.242,-552.8,-411.031,-531.305,-462.116,0,-345.306,-535.709,-595.089 0|0:320:14,29,14,30,103,32,4,51:14:548:29,14,30,103,32,4,51:1140,549,1171,3988,1268,144,2027:-445.114,-355.557,-391.888,-405.198,-356.487,-446.045,-371.186,-322.475,-372.116,-407.216,-121.822,-73.1101,-122.752,-88.7428,-135.877,-346.635,-297.924,-347.566,-313.554,-64.1887,-382.063,-437.587,-388.876,-438.517,-404.505,-155.141,-379.954,-481.443,-282.448,-233.737,-283.379,-249.367,0,-224.816,-315.768,-312.157 0|1:613:23,61,30,58,165,109,45,73:23:894:61,30,58,165,109,45,73:2374,1152,2281,6414,4094,1768,2869:-770.528,-582.7,-637.801,-683.882,-562.594,-748.315,-633.3,-512.012,-613.194,-689.304,-250.69,-129.401,-230.584,-180.004,-274.485,-453.298,-332.01,-433.192,-382.611,0,-493.949,-632.051,-510.763,-611.945,-561.363,-178.753,-381.361,-691.969,-541.487,-420.198,-521.381,-470.799,-88.1873,-290.796,-469.549,-592.975 0|1:297:3,1,21,41,91,52,22,26:3:118:1,21,41,91,52,22,26:40,839,1575,3588,1839,875,1007:-429.509,-427.117,-436.523,-361.39,-367.802,-364.776,-330.044,-336.455,-270.729,-327.408,-135.212,-141.624,-75.8956,-44.5542,-117.526,-285.493,-291.904,-226.178,-194.835,0,-279.546,-358.371,-364.783,-299.056,-267.71,-72.8759,-223.158,-361.455,-347.695,-354.107,-288.38,-257.034,-62.2001,-212.483,-285.36,-349.575 0|1:402:16,19,21,42,137,73,17,32:16:620:19,21,42,137,73,17,32:736,833,1669,5351,2734,665,1193:-602.373,-546.729,-591.945,-538.619,-529.094,-583.232,-519.03,-509.506,-501.395,-557.321,-167.314,-157.789,-149.678,-130.096,-177.009,-388.942,-379.418,-371.307,-351.721,0,-417.903,-552.515,-542.991,-534.88,-515.291,-163.575,-385.204,-598.333,-509.562,-500.037,-491.927,-472.339,-120.621,-342.251,-505.823,-550.864 dDocent_Contig_12319 27 . C T 2348.12 . AB=0.261905;ABP=189.137;AC=5;AF=0.416667;AN=12;AO=108;CIGAR=1X;DP=546;DPB=546;DPRA=0;EPP=125.337;EPPR=674.402;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.537037;PAIREDR=0.847032;PAO=0;PQA=0;PQR=0;PRO=0;QA=4313;QR=17134;RO=438;RPL=0;RPP=237.529;RPPR=954.115;RPR=108;RUN=1;SAF=93;SAP=125.337;SAR=15;SRF=403;SRP=674.402;SRR=35;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:99:69,30:69:2715:30:1201:-78.5661,0,-214.672 0/1:168:123,45:123:4796:45:1794:-111.107,0,-380.98 0/1:69:52,17:52:2029:17:681:-40.8471,0,-162.035 0/0:168:159,9:159:6254:9:355:0,-18.2605,-530.31 0/1:32:27,5:27:1031:5:201:-8.83793,0,-83.4457 0/1:10:8,2:8:309:2:81:-4.67543,0,-25.1606 dDocent_Contig_12320 10 . G A 81.9605 . AB=0.0954545;ABP=315.742;AC=1;AF=0.0833333;AN=12;AO=44;CIGAR=1X;DP=1297;DPB=1297;DPRA=0.922944;EPP=98.5551;EPPR=2717.35;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.977273;PAIREDR=0.9096;PAO=0;PQA=0;PQR=0;PRO=0;QA=1760;QR=48350;RO=1250;RPL=0;RPP=98.5551;RPPR=2717.35;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=1250;SRP=2717.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:220:199,21:199:7657:21:837:-9.4179,0,-622.623 0/0:244:241,3:241:9320:3:122:0,-62.0788,-826.976 0/0:155:152,3:152:5872:3:122:0,-35.2872,-516.965 0/0:165:155,10:155:5995:10:402:0,-13.1304,-502.865 0/0:282:275,7:275:10660:7:277:0,-59.5906,-933.526 0/0:231:228,0:228:8846:0:0:0,-68.6348,-795.451 dDocent_Contig_12321 107 . N T 1135.38 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=36;CIGAR=1X;DP=36;DPB=36;DPRA=0;EPP=81.1833;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1240;QR=0;RO=0;RPL=0;RPP=81.1833;RPPR=0;RPR=36;RUN=1;SAF=0;SAP=81.1833;SAR=36;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:18:0,18:0:0:18:622:-56.305,-5.41854,0 1/1:5:0,5:0:0:5:171:-15.7266,-1.50515,0 1/1:8:0,8:0:0:8:274:-24.9939,-2.40824,0 1/1:5:0,5:0:0:5:173:-15.9102,-1.50515,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12323 98 . N T 107.377 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=108;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:36:-3.59827,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:72:-6.83672,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12324 28 . A T 264.026 . AB=0.222222;ABP=39.2015;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=326;DPB=326;DPRA=1.2027;EPP=46.4397;EPPR=667.481;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=797;QR=12273;RO=306;RPL=0;RPP=46.4397;RPPR=667.481;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=306;SRP=667.481;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:58:53,5:53:2114:5:188:0,-0.178305,-173.164 0/0:66:63,3:63:2532:3:122:0,-8.49549,-216.643 0/0:30:30,0:30:1210:0:0:0,-9.0309,-109.173 0/1:54:42,12:42:1694:12:487:-27.925,0,-136.423 0/0:99:99,0:99:3963:0:0:0,-29.802,-356.656 0/0:19:19,0:19:760:0:0:0,-5.71957,-68.7214 dDocent_Contig_12325 20 . T C 1183.35 . AB=0.315068;ABP=46.3803;AC=3;AF=0.25;AN=12;AO=46;CIGAR=1X;DP=184;DPB=184;DPRA=3.84211;EPP=102.898;EPPR=302.673;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1850;QR=5395;RO=138;RPL=0;RPP=102.898;RPPR=302.673;RPR=46;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=138;SRP=302.673;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:6:6,0:6:239:0:0:0,-1.80618,-21.885 0/1:40:29,11:29:1132:11:436:-27.5508,0,-90.1222 0/1:66:43,23:43:1683:23:924:-63.5958,0,-131.844 0/1:40:28,12:28:1078:12:490:-32.4097,0,-85.2737 0/0:20:20,0:20:788:0:0:0,-6.0206,-71.2426 0/0:12:12,0:12:475:0:0:0,-3.61236,-43.1011 dDocent_Contig_12327 10 . C G 345.309 . AB=0.146341;ABP=181.177;AC=2;AF=0.2;AN=10;AO=25;CIGAR=1X;DP=240;DPB=240;DPRA=2.19048;EPP=57.2971;EPPR=469.877;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1002;QR=8581;RO=215;RPL=0;RPP=57.2971;RPPR=469.877;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=215;SRP=469.877;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:19,1:19:759:1:41:0,-1.92603,-64.5334 0/1:89:72,17:72:2858:17:680:-34.7395,0,-230.531 0/1:75:68,7:68:2715:7:281:-3.0853,0,-221.894 0/0:36:36,0:36:1460:0:0:0,-10.8371,-131.641 ./.:.:.:.:.:.:.:. 0/0:20:20,0:20:789:0:0:0,-6.0206,-71.3287 dDocent_Contig_12328 9 . C A 2394.23 . AB=0.452736;ABP=6.91031;AC=6;AF=0.5;AN=12;AO=91;CIGAR=1X;DP=201;DPB=201;DPRA=0;EPP=200.614;EPPR=241.872;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3435;QR=4203;RO=110;RPL=0;RPP=200.614;RPPR=241.872;RPR=91;RUN=1;SAF=91;SAP=200.614;SAR=0;SRF=110;SRP=241.872;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:9,12:9:349:12:437:-33.3431,0,-25.4491 0/1:33:11,22:11:414:22:847:-66.617,0,-27.6721 0/1:26:10,16:10:383:16:594:-45.966,0,-26.9975 0/1:31:11,20:11:425:20:777:-60.9262,0,-29.272 0/1:48:40,8:40:1537:8:288:-11.811,0,-124.152 0/1:42:29,13:29:1095:13:492:-31.9815,0,-86.2091 dDocent_Contig_12329 167 . T C 2161.96 . AB=0;ABP=0;AC=2;AF=0.2;AN=10;AO=61;CIGAR=1X;DP=384;DPB=384;DPRA=0.755418;EPP=135.47;EPPR=704.396;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2396;QR=12579;RO=323;RPL=61;RPP=135.47;RPPR=704.396;RPR=0;RUN=1;SAF=0;SAP=135.47;SAR=61;SRF=0;SRP=704.396;SRR=323;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:67:67,0:67:2628:0:0:0,-20.169,-236.669 0/0:148:148,0:148:5775:0:0:0,-44.5524,-519.6 0/0:53:53,0:53:2034:0:0:0,-15.9546,-183.259 0/0:55:55,0:55:2142:0:0:0,-16.5566,-192.963 ./.:.:.:.:.:.:.:. 1/1:61:0,61:0:0:61:2396:-215.798,-18.3628,0 dDocent_Contig_12332 1 . N G 76.8682 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12333 27 . A G 97.2552 . AB=0.148148;ABP=61.0771;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=313;DPB=313;DPRA=0.416988;EPP=20.3821;EPPR=663.138;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=316;QR=12093;RO=304;RPL=0;RPP=20.3821;RPPR=663.138;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=304;SRP=663.138;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:915:0:0:0,-6.92369,-82.652 0/1:28:23,5:23:898:5:203:-10.2242,0,-72.6959 0/0:49:49,0:49:1972:0:0:0,-14.7505,-177.672 0/1:26:23,3:23:915:3:113:-2.70924,0,-74.83 0/0:106:106,0:106:4200:0:0:0,-31.9092,-377.961 0/0:81:80,0:80:3193:0:0:0,-24.0824,-287.028 dDocent_Contig_12334 15 . T C 4311.87 . AB=0.509804;ABP=3.09546;AC=8;AF=0.666667;AN=12;AO=131;CIGAR=1X;DP=183;DPB=183;DPRA=0;EPP=287.473;EPPR=115.927;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.824427;PAIREDR=0.730769;PAO=0;PQA=0;PQR=0;PRO=0;QA=5282;QR=2080;RO=52;RPL=0;RPP=287.473;RPPR=115.927;RPR=131;RUN=1;SAF=131;SAP=287.473;SAR=0;SRF=52;SRP=115.927;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:10,11:10:392:11:432:-32.9044,0,-29.3139 0/1:30:18,12:18:712:12:476:-34.1561,0,-55.3738 0/1:12:5,7:5:201:7:282:-22.1404,0,-14.8582 0/1:39:17,22:17:694:22:898:-69.3837,0,-51.0474 1/1:49:1,48:1:41:48:1935:-170.246,-10.6559,0 1/1:32:1,31:1:40:31:1259:-109.578,-5.63728,0 dDocent_Contig_12335 107 . G A 573.174 . AB=0.375;ABP=10.6105;AC=2;AF=0.166667;AN=12;AO=25;CIGAR=1X;DP=169;DPB=169;DPRA=0.926667;EPP=57.2971;EPPR=315.702;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.44;PAIREDR=0.583333;PAO=0;PQA=0;PQR=0;PRO=0;QA=984;QR=5744;RO=144;RPL=25;RPP=57.2971;RPPR=315.702;RPR=0;RUN=1;SAF=0;SAP=57.2971;SAR=25;SRF=0;SRP=315.702;SRR=144;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:13,1:13:528:1:41:0,-0.119853,-43.7725 0/1:30:17,13:17:685:13:527:-38.7459,0,-52.9477 0/1:26:18,8:18:726:8:325:-21.7929,0,-57.8388 0/0:34:33,1:33:1313:1:41:0,-6.14045,-114.335 0/0:35:33,2:33:1301:2:50:0,-5.79121,-112.606 0/0:30:30,0:30:1191:0:0:0,-9.0309,-107.466 dDocent_Contig_12336 94 . C T 42.8856 . AB=0.230769;ABP=11.1951;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=105;DPB=105;DPRA=0.706522;EPP=9.52472;EPPR=224.5;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.960784;PAO=0;PQA=0;PQR=0;PRO=0;QA=101;QR=3356;RO=102;RPL=3;RPP=9.52472;RPPR=224.5;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=102;SRP=224.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:13:10,3:10:342:3:101:-5.51038,0,-27.198 0/0:25:25,0:25:795:0:0:0,-7.52575,-71.8473 0/0:15:15,0:15:501:0:0:0,-4.51545,-45.4104 0/0:12:12,0:12:396:0:0:0,-3.61236,-35.9592 0/0:28:28,0:28:906:0:0:0,-8.42884,-81.8385 0/0:12:12,0:12:416:0:0:0,-3.61236,-37.7726 dDocent_Contig_12338 41 . A G 2216.89 . AB=0.0666667;ABP=223.198;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=3M2X;DP=174;DPB=259.8;DPRA=0;EPP=22.5536;EPPR=185.414;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.888889;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=352;QR=3304;RO=84;RPL=0;RPP=22.5536;RPPR=185.414;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=84;SRP=185.414;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:26:16,0,1,9:16:626:0,1,9:0,40,361:-24.9281,-29.7446,-81.2044,-26.4496,-77.9091,-77.608,0,-51.4576,-48.162,-48.7483 0|0:25:21,0,1,3:21:816:0,1,3:0,41,119:-3.46363,-9.78526,-76.8255,-6.39787,-73.4406,-73.1396,0,-67.0295,-63.6444,-66.1264 0|0:37:15,0,4,18:15:589:0,4,18:0,162,705:-53.4356,-57.9511,-106.39,-44.5905,-93.0307,-91.8266,0,-48.4301,-35.0694,-43.0115 0|0:38:29,0,2,7:29:1153:0,2,7:0,69,268:-13.2846,-22.0144,-116.963,-16.4191,-111.362,-110.76,0,-94.9799,-89.3795,-92.8726 0|0:39:3,33,0,3:3:120:33,0,3:1284,0,122:-104.784,-0.184591,-0.132548,-105.687,-10.0665,-115.573,-95.6226,0,-105.509,-104.606 1|0:9:0,0,1,8:0:0:0,1,8:0,40,324:-30.4155,-30.4155,-30.4155,-27.121,-27.121,-26.8199,-3.69465,-3.69465,0,-1.28641 dDocent_Contig_12340 13 . A G 307.777 . AB=0.186813;ABP=80.539;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=310;DPB=310;DPRA=0.9375;EPP=46.4397;EPPR=632.737;GTI=0;LEN=1;MEANALT=1;MQM=58.2;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.9;PAIREDR=0.993103;PAO=0;PQA=0;PQR=0;PRO=0;QA=802;QR=11603;RO=290;RPL=0;RPP=46.4397;RPPR=632.737;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=290;SRP=632.737;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:17,11:17:687:11:434:-30.9835,0,-53.7304 0/0:59:56,3:56:2191:3:123:0,-6.29598,-185.896 0/0:8:8,0:8:325:0:0:0,-2.40824,-29.6196 0/0:78:78,0:78:3152:0:0:0,-23.4803,-283.741 0/0:74:74,0:74:2977:0:0:0,-22.2762,-268.012 0/1:63:57,6:57:2271:6:245:-3.00908,0,-185.579 dDocent_Contig_12341 14 . G A 392.304 . AB=0.183333;ABP=107.531;AC=3;AF=0.25;AN=12;AO=24;CIGAR=1X;DP=320;DPB=320;DPRA=1.0534;EPP=55.1256;EPPR=637.11;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993243;PAO=0;PQA=0;PQR=0;PRO=0;QA=962;QR=11819;RO=296;RPL=0;RPP=55.1256;RPPR=645.766;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=295;SRP=637.11;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1124:0:0:0,-8.42884,-101.443 0/1:40:33,7:33:1323:7:285:-13.9832,0,-107.294 0/1:47:42,5:42:1686:5:195:-3.77285,0,-137.814 0/1:33:23,10:23:904:10:403:-26.695,0,-71.7265 0/0:75:75,0:75:2994:0:0:0,-22.5772,-269.553 0/0:97:95,2:95:3788:2:79:0,-21.7027,-333.429 dDocent_Contig_12342 7 . C T 3611.44 . AB=0.333333;ABP=109.412;AC=6;AF=0.5;AN=12;AO=147;CIGAR=1X;DP=441;DPB=441;DPRA=0;EPP=322.217;EPPR=639.252;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.993197;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5592;QR=11245;RO=293;RPL=0;RPP=322.217;RPPR=639.252;RPR=147;RUN=1;SAF=147;SAP=322.217;SAR=0;SRF=293;SRP=639.252;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:86:75,11:75:2854:11:425:-12.7159,0,-231.145 0/1:86:69,17:69:2666:17:654:-33.3081,0,-214.237 0/1:66:54,12:54:2085:12:459:-21.7919,0,-168.011 0/1:103:65,38:65:2492:38:1440:-98.872,0,-193.476 0/1:51:9,42:9:342:42:1598:-128.738,0,-15.7837 0/1:49:21,27:21:806:27:1016:-76.9401,0,-58.0644 dDocent_Contig_12343 29 . C G 116.549 . AB=0.212121;ABP=26.7649;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=140;DPB=140;DPRA=1.5443;EPP=22.5536;EPPR=287.473;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.333333;PAIREDR=0.442748;PAO=0;PQA=0;PQR=0;PRO=0;QA=333;QR=5280;RO=131;RPL=0;RPP=22.5536;RPPR=287.473;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=131;SRP=287.473;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:710:0:0:0,-5.41854,-64.2233 0/0:28:26,2:26:1054:2:80:0,-0.837049,-87.5572 0/1:33:26,7:26:1049:7:253:-13.1777,0,-84.7661 0/0:12:12,0:12:487:0:0:0,-3.61236,-44.1811 0/0:23:23,0:23:922:0:0:0,-6.92369,-83.2829 0/0:26:26,0:26:1058:0:0:0,-7.82678,-95.5065 dDocent_Contig_12344 7 . C T 52.1343 . AB=0.272727;ABP=7.94546;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=135;DPB=135;DPRA=0.443548;EPP=9.52472;EPPR=289.645;GTI=0;LEN=1;MEANALT=1;MQM=44;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=110;QR=5060;RO=132;RPL=0;RPP=9.52472;RPPR=289.645;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=132;SRP=289.645;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:531:0:0:0,-4.21442,-48.1319 0/0:50:50,0:50:1912:0:0:0,-15.0515,-172.324 0/0:28:28,0:28:1074:0:0:0,-8.42884,-96.9637 0/0:11:11,0:11:424:0:0:0,-3.31133,-38.5136 0/0:21:21,0:21:810:0:0:0,-6.32163,-73.2252 0/1:11:8,3:8:309:3:110:-6.73631,0,-24.8616 dDocent_Contig_12345 9 . C T 373.063 . AB=0.1875;ABP=98.0122;AC=2;AF=0.166667;AN=12;AO=38;CIGAR=1X;DP=397;DPB=397;DPRA=0;EPP=85.5263;EPPR=782.569;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.295265;PAO=0;PQA=0;PQR=0;PRO=0;QA=1434;QR=13853;RO=359;RPL=0;RPP=85.5263;RPPR=782.569;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=359;SRP=782.569;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:52:46,6:46:1784:6:233:-5.68652,0,-145.157 0/0:83:79,4:79:3038:4:154:0,-10.752,-259.347 0/0:79:77,2:77:2951:2:78:0,-16.3779,-258.35 0/0:74:68,6:68:2636:6:234:0,-0.845115,-215.994 0/1:60:45,15:45:1735:15:584:-34.8414,0,-138.344 0/0:49:44,5:44:1709:5:151:0,-0.863255,-140.178 dDocent_Contig_12346 21 . C A 834.483 . AB=0.266667;ABP=66.8516;AC=3;AF=0.3;AN=10;AO=36;CIGAR=1X;DP=170;DPB=170;DPRA=2.57143;EPP=81.1833;EPPR=293.988;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1426;QR=5351;RO=134;RPL=0;RPP=81.1833;RPPR=293.988;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=134;SRP=293.988;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1316:0:0:0,-9.93399,-118.701 0/1:67:58,9:58:2310:9:357:-12.3233,0,-187.888 0/1:39:23,16:23:932:16:628:-45.1109,0,-72.4423 0/1:29:18,11:18:720:11:441:-31.3149,0,-56.3947 0/0:2:2,0:2:73:0:0:0,-0.60206,-6.9307 ./.:.:.:.:.:.:.:. dDocent_Contig_12347 33 . G A 178.811 . AB=0.275862;ABP=15.6647;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=240;DPB=240;DPRA=0.274882;EPP=20.3821;EPPR=506.792;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.935345;PAO=0;PQA=0;PQR=0;PRO=0;QA=323;QR=9128;RO=232;RPL=0;RPP=20.3821;RPPR=506.792;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=232;SRP=506.792;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:113:113,0:113:4384:0:0:0,-34.0164,-394.539 0/1:22:16,6:16:633:6:245:-15.8068,0,-50.6795 0/0:64:64,0:64:2554:0:0:0,-19.2659,-230.003 0/0:24:24,0:24:952:0:0:0,-7.22472,-85.9824 0/0:10:10,0:10:403:0:0:0,-3.0103,-36.6306 0/1:7:5,2:5:202:2:78:-5.29609,0,-16.4543 dDocent_Contig_12348 85 . A C 460.511 . AB=0.154506;ABP=244.584;AC=6;AF=0.5;AN=12;AO=36;CIGAR=1X3M;DP=255;DPB=255;DPRA=0;EPP=81.1833;EPPR=454.677;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.305556;PAIREDR=0.4375;PAO=0;PQA=0;PQR=0;PRO=0;QA=1243;QR=7050;RO=208;RPL=26;RPP=18.4519;RPPR=129.332;RPR=10;RUN=1;SAF=26;SAP=18.4519;SAR=10;SRF=159;SRP=129.332;SRR=49;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:22:18,4,0:18:601:4,0:137,0:-6.0455,0,-47.784,-11.464,-48.9881,-60.1113 0|1:39:33,1,5:33:1077:1,5:29,174:-4.2632,-11.8982,-98.5434,0,-84.6926,-85.4951 0|1:48:38,6,4:38:1273:6,4:205,128:-5.21134,0,-101.298,-6.34711,-92.7941,-108.228 0|1:40:31,0,9:31:1068:0,9:0,312:-16.3741,-25.7061,-112.457,0,-87.0974,-84.3882 0|1:56:44,0,12:44:1517:0,12:0,418:-21.0958,-34.3411,-157.574,0,-123.58,-119.968 0|1:50:44,0,6:44:1514:0,6:0,211:-4.28212,-17.5274,-140.486,0,-123.31,-121.503 dDocent_Contig_12349 90 . G A 114.019 . AB=0.195122;ABP=36.112;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=246;DPB=246;DPRA=1;EPP=20.3821;EPPR=519.821;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.726891;PAO=0;PQA=0;PQR=0;PRO=0;QA=277;QR=8021;RO=238;RPL=8;RPP=20.3821;RPPR=494.092;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=235;SRP=494.092;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:38,0:38:1264:0:0:0,-11.4391,-114.057 0/0:40:40,0:40:1352:0:0:0,-12.0412,-121.978 0/0:43:43,0:43:1429:0:0:0,-12.9443,-128.898 0/1:41:33,8:33:1120:8:277:-12.9248,0,-88.7619 0/0:40:40,0:40:1363:0:0:0,-12.0412,-122.968 0/0:44:44,0:44:1493:0:0:0,-13.2453,-134.664 dDocent_Contig_12350 17 . T A 58.9411 . AB=0.116667;ABP=79.5909;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=268;DPB=268;DPRA=1.44231;EPP=18.2106;EPPR=569.765;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=279;QR=10425;RO=261;RPL=0;RPP=18.2106;RPPR=569.765;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=261;SRP=569.765;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:52:52,0:52:2074:0:0:0,-15.6536,-186.843 0/0:56:56,0:56:2271:0:0:0,-16.8577,-204.543 0/0:31:31,0:31:1241:0:0:0,-9.33193,-111.962 0/1:60:53,7:53:2105:7:279:-7.41699,0,-171.575 0/0:33:33,0:33:1295:0:0:0,-9.93399,-116.818 0/0:36:36,0:36:1439:0:0:0,-10.8371,-129.761 dDocent_Contig_12351 30 . G T 428.503 . AB=0.888889;ABP=14.8328;AC=3;AF=0.25;AN=12;AO=13;CIGAR=1X;DP=93;DPB=93;DPRA=0.35443;EPP=31.2394;EPPR=176.728;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.975;PAO=0;PQA=0;PQR=0;PRO=0;QA=496;QR=3169;RO=80;RPL=0;RPP=31.2394;RPPR=176.728;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=80;SRP=176.728;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:881:0:0:0,-6.62266,-79.5992 0/0:17:17,0:17:653:0:0:0,-5.11751,-59.0936 0/0:30:30,0:30:1201:0:0:0,-9.0309,-108.365 0/0:10:10,0:10:401:0:0:0,-3.0103,-36.4475 1/1:5:0,5:0:0:5:193:-17.7408,-1.50515,0 0/1:9:1,8:1:33:8:303:-24.9184,0,-0.589865 dDocent_Contig_12352 13 . G A 18924.5 . AB=0.771363;ABP=279.961;AC=8;AF=0.666667;AN=12;AO=578;CIGAR=1X4M;DP=685;DPB=685;DPRA=0;EPP=1258.12;EPPR=148.499;GTI=0;LEN=1;MEANALT=2.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=22654;QR=2653;RO=67;RPL=0;RPP=1258.12;RPPR=148.499;RPR=578;RUN=1;SAF=578;SAP=1258.12;SAR=0;SRF=67;SRP=148.499;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:97:11,2,83:11:434:2,83:76,3266:-265.353,-262.432,-297.539,0,-29.4991,-10.7447 0|1:106:24,6,76:24:955:6,76:239,2990:-238.704,-226.247,-303.076,0,-58.9523,-55.7554 0|1:122:14,11,93:14:559:11,93:425,3615:-292.799,-262.112,-304.844,0,-11.1493,-18.0502 0|1:108:13,9,82:13:507:9,82:359,3224:-261.239,-235.586,-274.55,0,-12.101,-16.9847 1|1:122:2,0,118:2:80:0,118:0,4629:-408.961,-409.563,-416.153,-28.9365,-35.5215,0 1|1:130:3,1,126:3:118:1,126:38,4930:-432.62,-430.406,-439.812,-28.2137,-34.8166,0 dDocent_Contig_12354 11 . A T 1142.66 . AB=0.482353;ABP=3.24022;AC=4;AF=0.4;AN=10;AO=41;CIGAR=1X;DP=109;DPB=109;DPRA=0.885417;EPP=92.0407;EPPR=150.67;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.985294;PAO=0;PQA=0;PQR=0;PRO=0;QA=1619;QR=2720;RO=68;RPL=0;RPP=92.0407;RPPR=150.67;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=68;SRP=150.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:970:0:0:0,-7.22472,-87.5992 0/1:13:9,4:9:358:4:162:-11.0534,0,-28.6644 0/1:17:12,5:12:483:5:200:-13.2624,0,-38.7043 0/1:46:19,27:19:748:27:1053:-81.2163,0,-53.7915 ./.:.:.:.:.:.:.:. 0/1:9:4,5:4:161:5:204:-16.0348,0,-12.1662 dDocent_Contig_12355 119 . T G 293.843 . AB=0.571429;ABP=3.94093;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=69;DPB=69;DPRA=2.1875;EPP=29.068;EPPR=126.784;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.824561;PAO=0;PQA=0;PQR=0;PRO=0;QA=410;QR=1940;RO=57;RPL=0;RPP=29.068;RPPR=126.784;RPR=12;RUN=1;SAF=0;SAP=29.068;SAR=12;SRF=0;SRP=126.784;SRR=57;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:346:0:0:0,-3.0103,-31.4744 0/0:3:3,0:3:105:0:0:0,-0.90309,-9.79616 0/0:10:10,0:10:329:0:0:0,-3.0103,-29.9288 0/0:11:11,0:11:381:0:0:0,-3.31133,-34.6235 0/1:21:9,12:9:307:12:410:-30.9071,0,-21.6397 0/0:14:14,0:14:472:0:0:0,-4.21442,-42.8033 dDocent_Contig_12356 39 . T G 145.913 . AB=0.241379;ABP=19.8579;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=254;DPB=254;DPRA=0.644444;EPP=18.2106;EPPR=537.193;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.95935;PAO=0;PQA=0;PQR=0;PRO=0;QA=272;QR=9498;RO=246;RPL=0;RPP=18.2106;RPPR=537.193;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=246;SRP=537.193;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:43:43,0:43:1662:0:0:0,-12.9443,-149.823 0/0:58:57,0:57:2216:0:0:0,-17.1587,-199.371 0/0:32:32,0:32:1264:0:0:0,-9.63296,-114.03 0/1:29:22,7:22:866:7:272:-16.1142,0,-69.5164 0/0:40:40,0:40:1517:0:0:0,-12.0412,-136.774 0/0:52:52,0:52:1973:0:0:0,-15.6536,-177.777 dDocent_Contig_12357 18 . C A 86.9615 . AB=0.137255;ABP=61.2994;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=414;DPB=414;DPRA=1.12453;EPP=26.8965;EPPR=878.114;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995037;PAO=0;PQA=0;PQR=0;PRO=0;QA=408;QR=15922;RO=403;RPL=0;RPP=26.8965;RPPR=878.114;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=403;SRP=878.114;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:66:66,0:66:2621:0:0:0,-19.868,-236.022 0/0:61:61,0:61:2409:0:0:0,-18.3628,-216.965 0/0:74:74,0:74:2920:0:0:0,-22.2762,-262.915 0/0:64:64,0:64:2491:0:0:0,-19.2659,-224.342 0/0:98:94,4:94:3727:4:128:0,-17.6717,-323.61 0/1:51:44,7:44:1754:7:280:-10.219,0,-142.726 dDocent_Contig_12360 24 . A T 83.0178 . AB=0.145833;ABP=55.3066;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=2X;DP=162;DPB=162;DPRA=0.842105;EPP=18.2106;EPPR=339.589;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.428571;PAIREDR=0.806452;PAO=0;PQA=0;PQR=0;PRO=0;QA=280;QR=6117;RO=155;RPL=0;RPP=18.2106;RPPR=339.589;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=155;SRP=339.589;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:23:19,4:19:739:4:160:-7.86011,0,-59.9022 0|0:34:34,0:34:1357:0:0:0,-10.235,-122.395 0|0:16:16,0:16:634:0:0:0,-4.81648,-57.3904 0|1:25:22,3:22:871:3:120:-3.66194,0,-71.1789 0|0:43:43,0:43:1685:0:0:0,-12.9443,-151.874 0|0:21:21,0:21:831:0:0:0,-6.32163,-75.1072 dDocent_Contig_12361 10 . A T 3658.52 . AB=0.309353;ABP=46.8928;AC=7;AF=0.583333;AN=12;AO=122;CIGAR=1X;DP=272;DPB=272;DPRA=0;EPP=267.93;EPPR=328.731;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.959016;PAIREDR=0.88;PAO=0;PQA=0;PQR=0;PRO=0;QA=4889;QR=5986;RO=150;RPL=0;RPP=267.93;RPPR=328.731;RPR=122;RUN=1;SAF=122;SAP=267.93;SAR=0;SRF=150;SRP=328.731;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:52:49,3:49:1949:3:110:0,-5.39557,-165.352 0/1:61:43,18:43:1704:18:721:-46.8469,0,-135.228 0/1:41:28,13:28:1119:13:524:-35.1641,0,-88.6482 0/1:37:25,12:25:1015:12:476:-32.053,0,-80.5046 1/1:46:3,43:3:122:43:1731:-144.633,-2.47489,0 1/1:35:2,33:2:77:33:1327:-112.377,-3.22785,0 dDocent_Contig_12363 23 . T G 91.8474 . AB=0.115385;ABP=36.4176;AC=4;AF=0.333333;AN=12;AO=10;CIGAR=1X;DP=201;DPB=201;DPRA=0;EPP=10.8276;EPPR=417.762;GTI=0;LEN=1;MEANALT=1;MQM=58.8;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.6;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=388;QR=7521;RO=191;RPL=4;RPP=3.87889;RPPR=417.762;RPR=6;RUN=1;SAF=8;SAP=10.8276;SAR=2;SRF=191;SRP=417.762;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:46:45,1:45:1777:1:41:0,-9.75281,-156.057 0/0:73:70,3:70:2756:3:119:0,-10.8798,-237.077 0/1:23:21,2:21:842:2:77:-0.379663,0,-69.1712 0/0:54:53,1:53:2066:1:34:0,-12.8567,-182.747 1/1:2:0,2:0:0:2:76:-7.20859,-0.60206,0 0/1:3:2,1:2:80:1:41:-3.19148,0,-6.68848 dDocent_Contig_12365 107 . N A 38.951 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=41;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:41:-3.89396,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12366 24 . T C 488.124 . AB=0.268293;ABP=41.2494;AC=4;AF=0.333333;AN=12;AO=23;CIGAR=2X;DP=128;DPB=128;DPRA=1.14737;EPP=52.9542;EPPR=231.015;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.73913;PAIREDR=0.742857;PAO=0;PQA=0;PQR=0;PRO=0;QA=920;QR=4202;RO=105;RPL=0;RPP=52.9542;RPPR=231.015;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=105;SRP=231.015;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:24:21,3:21:844:3:123:-4.24007,0,-69.0489 0|1:15:9,6:9:363:6:242:-17.6419,0,-28.5188 0|0:27:26,1:26:1055:1:40:0,-4.13213,-91.2425 0|1:26:16,10:16:620:10:394:-27.9892,0,-48.2985 0|0:19:19,0:19:767:0:0:0,-5.71957,-69.3492 0|1:17:14,3:14:553:3:121:-6.16269,0,-44.9936 dDocent_Contig_12368 159 . C T 209.64 . AB=0.5;ABP=3.0103;AC=2;AF=0.2;AN=10;AO=8;CIGAR=1X;DP=60;DPB=60;DPRA=0.545455;EPP=20.3821;EPPR=107.408;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.6923;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.980769;PAO=0;PQA=0;PQR=0;PRO=0;QA=313;QR=1997;RO=52;RPL=8;RPP=20.3821;RPPR=107.408;RPR=0;RUN=1;SAF=0;SAP=20.3821;SAR=8;SRF=0;SRP=115.927;SRR=52;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:8:8,0:8:312:0:0:0,-2.40824,-28.4379 0/0:28:28,0:28:1047:0:0:0,-8.42884,-94.5091 0/0:8:8,0:8:317:0:0:0,-2.40824,-28.894 0/1:10:7,3:7:283:3:111:-7.34231,0,-22.8331 ./.:.:.:.:.:.:.:. 0/1:6:1,5:1:38:5:202:-16.7557,0,-1.89651 dDocent_Contig_12369 25 . C T 60.1426 . AB=0.104839;ABP=171.194;AC=3;AF=0.25;AN=12;AO=13;CIGAR=1X;DP=205;DPB=205;DPRA=1.53086;EPP=31.2394;EPPR=419.933;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.932292;PAO=0;PQA=0;PQR=0;PRO=0;QA=526;QR=7671;RO=192;RPL=0;RPP=31.2394;RPPR=419.933;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=192;SRP=419.933;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:39:35,4:35:1419:4:164:-3.40973,0,-116.218 0/1:55:50,5:50:1986:5:202:-2.00522,0,-162.378 0/1:30:26,4:26:1054:4:160:-5.75253,0,-86.1148 0/0:31:31,0:31:1218:0:0:0,-9.33193,-109.892 0/0:21:21,0:21:848:0:0:0,-6.32163,-76.6319 0/0:29:29,0:29:1146:0:0:0,-8.72987,-103.423 dDocent_Contig_12371 25 . G T 1717.94 . AB=0.212048;ABP=301.894;AC=5;AF=0.416667;AN=12;AO=90;CIGAR=1X;DP=459;DPB=459;DPRA=0;EPP=198.443;EPPR=804.284;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=0.95393;PAO=0;PQA=0;PQR=0;PRO=0;QA=3436;QR=14570;RO=369;RPL=0;RPP=198.443;RPPR=804.284;RPR=90;RUN=1;SAF=90;SAP=198.443;SAR=0;SRF=369;SRP=804.284;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:45:34,11:34:1359:11:421:-24.6952,0,-109.022 0/1:90:73,17:73:2904:17:644:-31.1989,0,-234.365 0/0:44:42,2:42:1666:2:55:0,-8.02241,-144.936 0/1:98:83,15:83:3283:15:578:-22.8566,0,-266.035 0/1:87:61,26:61:2391:26:1015:-65.4673,0,-189.149 0/1:95:76,19:76:2967:19:723:-36.7979,0,-238.531 dDocent_Contig_12372 11 . T C 4983.28 . AB=0.547297;ABP=8.76177;AC=6;AF=0.6;AN=10;AO=165;CIGAR=1X;DP=299;DPB=299;DPRA=0;EPP=361.303;EPPR=293.988;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6594;QR=5307;RO=134;RPL=0;RPP=361.303;RPPR=293.988;RPR=165;RUN=1;SAF=165;SAP=361.303;SAR=0;SRF=134;SRP=293.988;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:78:40,38:40:1567:38:1520:-113.558,0,-117.793 0/1:92:51,41:51:2014:41:1643:-120.394,0,-153.756 0/1:71:24,47:24:965:47:1877:-147.746,0,-65.7757 0/1:55:19,36:19:761:36:1436:-112.93,0,-52.2532 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:118:-11.0016,-0.90309,0 dDocent_Contig_12373 11 . T C 145.675 . AB=0.212121;ABP=26.7649;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=215;DPB=215;DPRA=0.906593;EPP=18.2106;EPPR=454.677;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.725962;PAO=0;PQA=0;PQR=0;PRO=0;QA=285;QR=8388;RO=208;RPL=0;RPP=18.2106;RPPR=454.677;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=208;SRP=454.677;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:34,0:34:1385:0:0:0,-10.235,-124.899 0/0:57:57,0:57:2309:0:0:0,-17.1587,-207.955 0/0:33:33,0:33:1329:0:0:0,-9.93399,-119.867 0/0:33:33,0:33:1328:0:0:0,-9.93399,-119.779 0/0:25:25,0:25:981:0:0:0,-7.52575,-88.582 0/1:33:26,7:26:1056:7:285:-16.0904,0,-85.394 dDocent_Contig_12374 40 . G T 39.6884 . AB=0.157895;ABP=22.325;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=308;DPB=308;DPRA=1.22513;EPP=22.5536;EPPR=652.281;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=353;QR=11233;RO=299;RPL=0;RPP=22.5536;RPPR=652.281;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=299;SRP=652.281;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:16,3:16:603:3:117:-5.19064,0,-48.8851 0/0:45:45,0:45:1634:0:0:0,-13.5463,-147.317 0/0:98:92,6:92:3521:6:236:0,-7.88812,-295.396 0/0:39:39,0:39:1441:0:0:0,-11.7402,-129.957 0/0:75:75,0:75:2840:0:0:0,-22.5772,-255.776 0/0:32:32,0:32:1194:0:0:0,-9.63296,-107.755 dDocent_Contig_12375 43 . C A 10711.9 . AB=0.714876;ABP=197.115;AC=6;AF=0.6;AN=10;AO=347;CIGAR=1X;DP=485;DPB=485;DPRA=0;EPP=756.511;EPPR=302.673;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13595;QR=5478;RO=138;RPL=0;RPP=756.511;RPPR=302.673;RPR=347;RUN=1;SAF=347;SAP=756.511;SAR=0;SRF=138;SRP=302.673;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:129:23,106:23:909:106:4174:-336.815,0,-43.2772 0/1:171:62,109:62:2448:109:4306:-336.017,0,-168.999 0/1:103:18,85:18:730:85:3239:-260.585,0,-35.0179 0/1:81:35,46:35:1391:46:1835:-140.975,0,-101.068 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 dDocent_Contig_12376 36 . A C 307.664 . AB=0.182796;ABP=84.2887;AC=3;AF=0.25;AN=12;AO=21;CIGAR=1X;DP=198;DPB=198;DPRA=1.0375;EPP=48.6112;EPPR=387.361;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.536723;PAO=0;PQA=0;PQR=0;PRO=0;QA=858;QR=7039;RO=177;RPL=0;RPP=48.6112;RPPR=387.361;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=177;SRP=387.361;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:32,0:32:1270:0:0:0,-9.63296,-114.57 0/1:32:29,3:29:1157:3:121:-1.64724,0,-94.7803 0/1:27:20,7:20:788:7:287:-18.0774,0,-63.1085 0/0:32:30,2:30:1195:2:82:0,-1.85328,-100.049 0/1:34:27,7:27:1083:7:286:-15.8798,0,-87.5214 0/0:41:39,2:39:1546:2:82:0,-4.56255,-131.599 dDocent_Contig_12377 9 . A G 132.355 . AB=0.152778;ABP=78.4086;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=214;DPB=214;DPRA=1.31356;EPP=39.9253;EPPR=426.447;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.588235;PAIREDR=0.569231;PAO=0;PQA=0;PQR=0;PRO=0;QA=650;QR=7467;RO=195;RPL=0;RPP=39.9253;RPPR=426.447;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=195;SRP=426.447;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:43:36,6:36:1388:6:228:-7.90387,0,-112.226 0/1:29:24,5:24:921:5:188:-8.55334,0,-74.4776 0/0:27:25,2:25:963:2:78:0,-0.724337,-79.5807 0/0:56:52,4:52:1987:4:156:0,-2.44039,-164.653 0/0:39:38,0:38:1434:0:0:0,-11.4391,-129.06 0/0:20:20,0:20:774:0:0:0,-6.0206,-69.9884 dDocent_Contig_12378 14 . C T 32.9357 . AB=0.136364;ABP=28.2783;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=102;DPB=102;DPRA=1.375;EPP=9.52472;EPPR=217.986;GTI=0;LEN=1;MEANALT=1;MQM=57.3333;MQMR=59.9192;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.939394;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=3959;RO=99;RPL=0;RPP=9.52472;RPPR=217.986;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=99;SRP=217.986;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:281:0:0:0,-2.10721,-25.6626 0/1:22:19,3:19:747:3:123:-4.81622,0,-60.9291 0/0:19:19,0:19:767:0:0:0,-5.71957,-69.3501 0/0:14:14,0:14:560:0:0:0,-4.21442,-50.7424 0/0:24:24,0:24:959:0:0:0,-7.22472,-86.6038 0/0:16:16,0:16:645:0:0:0,-4.81648,-58.3838 dDocent_Contig_12379 16 . T A 56.1198 . AB=0.210526;ABP=16.8392;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=224;DPB=224;DPRA=0.463415;EPP=11.6962;EPPR=472.088;GTI=0;LEN=1;MEANALT=1;MQM=36;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.690909;PAO=0;PQA=0;PQR=0;PRO=0;QA=163;QR=8796;RO=220;RPL=0;RPP=11.6962;RPPR=480.734;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=219;SRP=472.088;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:59,0:59:2346:0:0:0,-17.7608,-211.291 0/0:52:52,0:52:2085:0:0:0,-15.6536,-187.828 0/0:33:33,0:33:1305:0:0:0,-9.93399,-117.707 0/0:58:58,0:58:2344:0:0:0,-17.4597,-211.106 0/0:3:3,0:3:122:0:0:0,-0.90309,-11.3725 0/1:19:15,4:15:594:4:163:-7.13476,0,-48.075 dDocent_Contig_12380 73 . C T 152.307 . AB=0.104478;ABP=94.0501;AC=3;AF=0.25;AN=12;AO=7;CIGAR=1X5M;DP=197;DPB=198.667;DPRA=0.966346;EPP=18.2106;EPPR=389.532;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=6.93889e-18;PAIRED=0;PAIREDR=0.483146;PAO=0;PQA=0;PQR=0;PRO=0;QA=275;QR=6657;RO=178;RPL=7;RPP=18.2106;RPPR=389.532;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=178;SRP=389.532;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:26:21,5,0:21:795:5,0:195,0:-10.0963,0,-64.0481,-16.418,-65.5533,-81.5838 0|1:35:26,5,3:26:955:5,3:163,116:-5.29688,0,-76.5392,-3.58005,-68.5145,-80.7652 0|0:14:14,0,0:14:537:0,0:0,0:0,-4.21442,-48.6736,-4.21442,-48.6736,-48.6736 0|0:29:29,0,0:29:1094:0,0:0,0:0,-8.72987,-98.7646,-8.72987,-98.7646,-98.7646 0|1:32:28,0,4:28:1072:0,4:0,159:-5.05916,-13.488,-101.449,0,-88.3565,-87.1524 0|0:61:60,0,0:60:2204:0,0:0,0:0,-18.0618,-198.512,-18.0618,-198.512,-198.512 dDocent_Contig_12381 27 . C T 2399.56 . AB=0.4125;ABP=13.6505;AC=7;AF=0.583333;AN=12;AO=83;CIGAR=1X;DP=177;DPB=177;DPRA=0;EPP=183.243;EPPR=207.129;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.831325;PAIREDR=0.680851;PAO=0;PQA=0;PQR=0;PRO=0;QA=3281;QR=3745;RO=94;RPL=0;RPP=183.243;RPPR=207.129;RPR=83;RUN=1;SAF=83;SAP=183.243;SAR=0;SRF=94;SRP=207.129;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:23,8:23:916:8:318:-19.6533,0,-73.4101 0/1:33:16,17:16:643:17:669:-50.6006,0,-48.27 0/1:34:23,11:23:919:11:439:-29.6277,0,-72.7812 0/1:34:25,9:25:984:9:352:-21.8066,0,-78.6193 1/1:17:0,17:0:0:17:676:-61.1721,-5.11751,0 0/1:28:7,21:7:283:21:827:-66.3179,0,-17.4145 dDocent_Contig_12382 17 . T A 155.118 . AB=0.857143;ABP=10.7656;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=179;DPB=179;DPRA=0.452055;EPP=18.2106;EPPR=376.504;GTI=0;LEN=1;MEANALT=1;MQM=37.7143;MQMR=59.9942;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=269;QR=6830;RO=172;RPL=0;RPP=18.2106;RPPR=376.504;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=172;SRP=376.504;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:43:43,0:43:1729:0:0:0,-12.9443,-155.831 0/0:14:14,0:14:565:0:0:0,-4.21442,-51.1914 0/0:9:9,0:9:359:0:0:0,-2.70927,-32.6713 0/0:80:80,0:80:3131:0:0:0,-24.0824,-281.87 0/1:7:1,6:1:39:6:228:-16.7816,0,-1.78935 0/0:26:25,1:25:1007:1:41:0,-4.20319,-87.302 dDocent_Contig_12383 16 . C T 42.7399 . AB=0.12;ABP=65.7224;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=165;DPB=165;DPRA=0.869565;EPP=16.0391;EPPR=348.274;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=0.528302;PAO=0;PQA=0;PQR=0;PRO=0;QA=239;QR=6421;RO=159;RPL=0;RPP=16.0391;RPPR=348.274;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=159;SRP=348.274;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1333:0:0:0,-9.93399,-120.23 0/1:29:25,4:25:1008:4:157:-5.77655,0,-82.2857 0/0:28:28,0:28:1127:0:0:0,-8.42884,-101.71 0/1:21:19,2:19:774:2:82:-1.45805,0,-63.6573 0/0:21:21,0:21:839:0:0:0,-6.32163,-75.8235 0/0:33:33,0:33:1340:0:0:0,-9.93399,-120.855 dDocent_Contig_12384 64 . C G 1452.03 . AB=0.205074;ABP=360.367;AC=4;AF=0.333333;AN=12;AO=112;CIGAR=1X;DP=831;DPB=831;DPRA=0;EPP=246.215;EPPR=1562.13;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.964286;PAIREDR=0.987465;PAO=0;PQA=0;PQR=0;PRO=0;QA=3779;QR=24641;RO=718;RPL=112;RPP=246.215;RPPR=1562.13;RPR=0;RUN=1;SAF=112;SAP=246.215;SAR=0;SRF=718;SRP=1562.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:163:158,5:158:5421:5:175:0,-32.9742,-471.96 0/1:153:123,30:123:4190:30:1023:-46.3211,0,-331.245 0/1:77:59,18:59:2030:18:622:-33.1255,0,-159.797 0/1:94:62,31:62:2140:31:1003:-62.2495,0,-164.558 0/0:195:185,10:185:6346:10:342:0,-27.5897,-540.163 0/1:149:131,18:131:4514:18:614:-10.7285,0,-361.602 dDocent_Contig_12385 8 . A T 1141.11 . AB=0.21147;ABP=204.755;AC=4;AF=0.333333;AN=12;AO=63;CIGAR=1X;DP=522;DPB=522;DPRA=0.505405;EPP=139.813;EPPR=999.716;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.976035;PAO=0;PQA=0;PQR=0;PRO=0;QA=2416;QR=17597;RO=459;RPL=0;RPP=139.813;RPPR=999.716;RPR=63;RUN=1;SAF=63;SAP=139.813;SAR=0;SRF=459;SRP=999.716;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:87:53,34:53:2032:34:1300:-91.0958,0,-156.927 0/1:83:75,8:75:2868:8:306:-2.9151,0,-233.313 0/1:43:35,8:35:1336:8:312:-15.5006,0,-107.581 0/1:66:57,9:57:2203:9:348:-11.8124,0,-178.623 0/0:148:148,0:148:5665:0:0:0,-44.5524,-509.824 0/0:95:91,4:91:3493:4:150:0,-14.7332,-300.637 dDocent_Contig_12386 19 . G A 41.6231 . AB=0.0909091;ABP=34.9902;AC=2;AF=0.166667;AN=12;AO=2;CIGAR=4M1D1M2X;DP=114;DPB=114.5;DPRA=1.18919;EPP=7.35324;EPPR=218.311;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9813;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.981308;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=4217;RO=107;RPL=0;RPP=7.35324;RPPR=235.358;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=105;SRP=218.311;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:16:16,0,0:16:632:0,0:0,0:0,-4.81648,-57.2155,-4.81648,-57.2155,-57.2155 0|0:35:33,0,0:33:1292:0,0:0,0:0,-9.93399,-116.153,-9.93399,-116.153,-116.153 0|0:16:16,0,0:16:642:0,0:0,0:0,-4.81648,-58.1158,-4.81648,-58.1158,-58.1158 0|1:22:20,0,2:20:778:0,2:0,81:-1.06307,-7.08367,-71.0001,0,-64.3195,-63.7175 0|1:18:15,3,0:15:595:3,0:119,0:-5.67685,0,-48.4697,-10.1923,-49.3728,-59.1688 0|0:7:7,0,0:7:278:0,0:0,0:0,-2.10721,-25.3911,-2.10721,-25.3911,-25.3911 dDocent_Contig_12388 24 . G A 684.932 . AB=0.321429;ABP=10.7656;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X2M1X2M1X2M1X;DP=149;DPB=149;DPRA=0.444444;EPP=22.5536;EPPR=254.901;GTI=0;LEN=1;MEANALT=1;MQM=19;MQMR=60;NS=6;NUMALT=2;ODDS=6.93889e-18;PAIRED=0;PAIREDR=0.887931;PAO=0;PQA=0;PQR=0;PRO=0;QA=305;QR=4538;RO=116;RPL=0;RPP=22.5536;RPPR=254.901;RPR=9;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=116;SRP=254.901;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:18:12,6,0:12:473:6,0:201,0:-4.94206,0,-37.5029,-8.55442,-39.3091,-47.6067 0|0:28:28,0,0:28:1090:0,0:0,0:0,-8.42884,-98.3901,-8.42884,-98.3901,-98.3901 0|1:10:7,3,0:7:264:3,0:104,0:-2.27738,0,-21.1065,-4.38459,-22.0096,-26.149 0|0:43:24,0,19:24:940:0,19:0,755:-55.3268,-62.5515,-139.845,0,-77.6875,-71.9679 0|0:15:10,0,5:10:386:0,5:0,192:-13.1321,-16.1424,-47.841,0,-32.0829,-30.5778 0|0:35:35,0,0:35:1385:0,0:0,0:0,-10.536,-124.919,-10.536,-124.919,-124.919 dDocent_Contig_12389 25 . G A 78.1377 . AB=0.2;ABP=22.5536;AC=2;AF=0.2;AN=10;AO=5;CIGAR=1X;DP=57;DPB=57;DPRA=1.17188;EPP=13.8677;EPPR=115.927;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=198;QR=2079;RO=52;RPL=0;RPP=13.8677;RPPR=115.927;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=52;SRP=115.927;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:558:0:0:0,-4.21442,-50.5624 0/0:13:13,0:13:518:0:0:0,-3.91339,-46.9629 0/1:18:16,2:16:646:2:81:-2.26719,0,-53.0557 0/1:7:4,3:4:154:3:117:-8.803,0,-12.1231 ./.:.:.:.:.:.:.:. 0/0:5:5,0:5:203:0:0:0,-1.50515,-18.6528 dDocent_Contig_12390 19 . G A 135.863 . AB=0.170213;ABP=47.41;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=412;DPB=412;DPRA=0.566978;EPP=26.8965;EPPR=873.771;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=441;QR=15918;RO=401;RPL=0;RPP=26.8965;RPPR=873.771;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=401;SRP=873.771;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:41,3:41:1639:3:120:0,-2.05801,-136.548 0/1:47:39,8:39:1512:8:321:-15.1091,0,-122.176 0/0:44:44,0:44:1747:0:0:0,-13.2453,-157.448 0/0:48:48,0:48:1926:0:0:0,-14.4494,-173.539 0/0:98:98,0:98:3908:0:0:0,-29.5009,-351.716 0/0:131:131,0:131:5186:0:0:0,-39.4349,-466.614 dDocent_Contig_12391 140 . A G 118.85 . AB=0.205882;ABP=28.557;AC=3;AF=0.25;AN=12;AO=7;CIGAR=1X;DP=69;DPB=69;DPRA=0.971429;EPP=18.2106;EPPR=137.642;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=272;QR=2343;RO=62;RPL=0;RPP=18.2106;RPPR=137.642;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=137.642;SRR=62;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:8:8,0:8:310:0:0:0,-2.40824,-28.2636 0/1:11:8,3:8:285:3:116:-7.50637,0,-22.6736 0/1:11:8,3:8:294:3:117:-7.59905,0,-23.4968 0/0:8:8,0:8:306:0:0:0,-2.40824,-27.9005 0/1:12:11,1:11:427:1:39:-0.284205,0,-35.1726 0/0:19:19,0:19:721:0:0:0,-5.71957,-65.2172 dDocent_Contig_12392 14 . C A 5083.86 . AB=0.521739;ABP=3.86001;AC=7;AF=0.583333;AN=12;AO=166;CIGAR=1X;DP=270;DPB=270;DPRA=0;EPP=363.475;EPPR=228.843;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.981928;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6633;QR=4192;RO=104;RPL=0;RPP=363.475;RPPR=228.843;RPR=166;RUN=1;SAF=166;SAP=363.475;SAR=0;SRF=104;SRP=228.843;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:21,17:21:858:17:670:-49.1885,0,-66.089 0/1:56:30,26:30:1206:26:1035:-76.5867,0,-91.9527 0/1:48:14,34:14:570:34:1342:-106.583,0,-37.1927 0/1:34:19,15:19:757:15:609:-44.9129,0,-58.2134 1/1:63:5,58:5:204:58:2336:-191.645,-0.220858,0 0/1:31:15,16:15:597:16:641:-48.6908,0,-44.7346 dDocent_Contig_12393 40 . A C 137.967 . AB=0.216216;ABP=28.8919;AC=3;AF=0.25;AN=12;AO=8;CIGAR=1X;DP=67;DPB=67;DPRA=1.23333;EPP=20.3821;EPPR=131.127;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=322;QR=2325;RO=59;RPL=0;RPP=20.3821;RPPR=131.127;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=59;SRP=131.127;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:1004:0:0:0,-7.82678,-90.6478 0/1:14:10,4:10:404:4:160:-10.569,0,-32.5051 0/1:13:11,2:11:434:2:81:-3.77234,0,-35.4974 0/1:10:8,2:8:323:2:81:-4.67543,0,-26.4289 0/0:2:2,0:2:82:0:0:0,-0.60206,-7.77968 0/0:2:2,0:2:78:0:0:0,-0.60206,-7.4033 dDocent_Contig_12394 12 . C A 779.462 . AB=0.265152;ABP=66.2462;AC=6;AF=0.5;AN=12;AO=35;CIGAR=1X;DP=132;DPB=132;DPRA=0;EPP=79.0118;EPPR=213.643;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.971429;PAIREDR=0.752577;PAO=0;PQA=0;PQR=0;PRO=0;QA=1390;QR=3914;RO=97;RPL=0;RPP=79.0118;RPPR=213.643;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=97;SRP=213.643;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:16,4:16:651:4:144:-7.2871,0,-52.9015 0/1:16:13,3:13:511:3:110:-5.44076,0,-41.5128 0/1:24:22,2:22:883:2:81:-0.461014,0,-72.5555 0/1:36:20,16:20:814:16:646:-47.6368,0,-62.7359 0/1:19:17,2:17:687:2:82:-2.06011,0,-56.44 0/1:17:9,8:9:368:8:327:-24.6826,0,-28.3678 dDocent_Contig_12397 21 . C A 181.843 . AB=0.153846;ABP=84.19;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=297;DPB=297;DPRA=1.57831;EPP=35.5824;EPPR=615.366;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.933333;PAIREDR=0.975177;PAO=0;PQA=0;PQR=0;PRO=0;QA=593;QR=11322;RO=282;RPL=0;RPP=35.5824;RPPR=615.366;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=282;SRP=615.366;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:36,0:36:1429:0:0:0,-10.8371,-128.859 0/1:78:66,12:66:2658:12:476:-19.7072,0,-215.852 0/0:25:25,0:25:985:0:0:0,-7.52575,-88.9378 0/0:53:50,3:50:2012:3:117:0,-5.0453,-170.357 0/0:55:55,0:55:2216:0:0:0,-16.5566,-199.602 0/0:50:50,0:50:2022:0:0:0,-15.0515,-182.161 dDocent_Contig_12398 13 . G T 84.1855 . AB=0.148936;ABP=53.3238;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=81;DPB=81;DPRA=3.26316;EPP=20.3821;EPPR=161.528;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.945205;PAO=0;PQA=0;PQR=0;PRO=0;QA=319;QR=2923;RO=73;RPL=0;RPP=20.3821;RPPR=161.528;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=73;SRP=161.528;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:399:0:0:0,-3.0103,-36.2677 0/1:24:20,4:20:800:4:156:-7.19099,0,-65.0894 0/0:4:4,0:4:162:0:0:0,-1.20412,-14.967 0/0:15:14,1:14:569:1:41:0,-0.420883,-47.4577 0/0:5:5,0:5:197:0:0:0,-1.50515,-18.1049 0/1:23:20,3:20:796:3:122:-4.4488,0,-65.0289 dDocent_Contig_12399 28 . T G 17466.6 . AB=0.782723;ABP=268.226;AC=7;AF=0.7;AN=10;AO=551;CIGAR=1X;DP=644;DPB=644;DPRA=0;EPP=1199.49;EPPR=204.957;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=21122;QR=3577;RO=93;RPL=0;RPP=1199.49;RPPR=204.957;RPR=551;RUN=1;SAF=551;SAP=1199.49;SAR=0;SRF=93;SRP=204.957;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:149:1,148:1:40:148:5664:-505.688,-40.8578,0 0/1:172:37,135:37:1436:135:5172:-413.666,0,-77.7266 0/1:113:37,76:37:1426:76:2901:-227.225,0,-94.5943 0/1:97:9,88:9:329:88:3365:-273.761,0,-0.747013 ./.:.:.:.:.:.:.:. 1/1:113:9,104:9:346:104:4020:-330.363,-2.51767,0 dDocent_Contig_12400 22 . A G 244.33 . AB=0.230769;ABP=35.7494;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=197;DPB=197;DPRA=0.717241;EPP=29.068;EPPR=404.733;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.691892;PAO=0;PQA=0;PQR=0;PRO=0;QA=473;QR=7385;RO=185;RPL=0;RPP=29.068;RPPR=404.733;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=185;SRP=404.733;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:40,0:40:1618:0:0:0,-12.0412,-145.845 0/0:46:46,0:46:1835:0:0:0,-13.8474,-165.355 0/0:29:29,0:29:1140:0:0:0,-8.72987,-102.876 0/0:30:30,0:30:1184:0:0:0,-9.0309,-106.836 0/1:21:18,3:18:718:3:117:-4.58695,0,-58.6243 0/1:31:22,9:22:890:9:356:-23.0677,0,-71.0749 dDocent_Contig_12401 127 . A G 108.94 . AB=0.242424;ABP=22.0271;AC=3;AF=0.3;AN=10;AO=9;CIGAR=1X;DP=49;DPB=49;DPRA=12;EPP=9.04217;EPPR=89.8692;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=55.325;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.85;PAO=0;PQA=0;PQR=0;PRO=0;QA=315;QR=1308;RO=40;RPL=0;RPP=22.5536;RPPR=89.8692;RPR=9;RUN=1;SAF=2;SAP=9.04217;SAR=7;SRF=0;SRP=89.8692;SRR=40;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:10:8,2:8:267:2:69:-3.54236,0,-20.7985 0/0:15:14,1:14:436:1:36:0,-0.917175,-35.9422 0/1:16:12,4:12:413:4:147:-8.77145,0,-30.0726 0/1:7:5,2:5:165:2:63:-3.87662,0,-13.0682 0/0:1:1,0:1:27:0:0:0,-0.30103,-2.34658 ./.:.:.:.:.:.:.:. dDocent_Contig_12402 26 . T A 588.684 . AB=0.196319;ABP=133.578;AC=4;AF=0.333333;AN=12;AO=32;CIGAR=1X;DP=208;DPB=208;DPRA=1.81111;EPP=72.4974;EPPR=385.189;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.84375;PAIREDR=0.835227;PAO=0;PQA=0;PQR=0;PRO=0;QA=1246;QR=6984;RO=176;RPL=0;RPP=72.4974;RPPR=385.189;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=176;SRP=385.189;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:12,9:12:479:9:350:-25.5337,0,-37.1356 0/1:59:54,5:54:2136:5:198:-0.436101,0,-174.657 0/1:33:21,12:21:823:12:459:-31.7211,0,-64.4462 0/1:50:44,6:44:1762:6:239:-6.83351,0,-143.742 0/0:35:35,0:35:1377:0:0:0,-10.536,-124.187 0/0:10:10,0:10:407:0:0:0,-3.0103,-36.9904 dDocent_Contig_12403 130 . A T 703.131 . AB=0.38961;ABP=11.1604;AC=6;AF=0.5;AN=12;AO=34;CIGAR=1X;DP=96;DPB=96;DPRA=0;EPP=76.8404;EPPR=137.642;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.735294;PAIREDR=0.967742;PAO=0;PQA=0;PQR=0;PRO=0;QA=1143;QR=2130;RO=62;RPL=0;RPP=76.8404;RPPR=137.642;RPR=34;RUN=1;SAF=0;SAP=76.8404;SAR=34;SRF=0;SRP=137.642;SRR=62;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:11:9,2:9:304:2:70:-3.33607,0,-24.3766 0/1:45:27,18:27:938:18:616:-42.2162,0,-71.1893 0/0:17:15,2:15:503:2:43:0,-1.03267,-41.5042 0/1:19:10,9:10:350:9:310:-22.5148,0,-26.118 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 0/1:2:1,1:1:35:1:34:-2.79685,0,-2.89657 dDocent_Contig_12404 18 . C T 694.808 . AB=0.300971;ABP=38.4496;AC=2;AF=0.166667;AN=12;AO=33;CIGAR=1X;DP=284;DPB=284;DPRA=1.09551;EPP=74.6689;EPPR=548.05;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.984064;PAO=0;PQA=0;PQR=0;PRO=0;QA=1218;QR=10065;RO=251;RPL=0;RPP=74.6689;RPPR=548.05;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=251;SRP=548.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:42:42,0:42:1672:0:0:0,-12.6433,-150.702 0/0:47:47,0:47:1897:0:0:0,-14.1484,-170.927 0/0:34:33,1:33:1309:1:36:0,-6.63674,-114.473 0/0:58:57,1:57:2301:1:37:0,-13.7619,-203.546 0/1:58:41,17:41:1659:17:622:-38.842,0,-132.07 0/1:45:31,14:31:1227:14:523:-33.8607,0,-97.1488 dDocent_Contig_12407 52 . C T 37.3372 . AB=0.142857;ABP=34.0313;AC=1;AF=0.125;AN=8;AO=6;CIGAR=1X;DP=113;DPB=113;DPRA=2.05405;EPP=3.0103;EPPR=201.913;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.7196;NS=4;NUMALT=1;ODDS=3.46945e-18;PAIRED=0;PAIREDR=0.925234;PAO=0;PQA=0;PQR=0;PRO=0;QA=232;QR=4268;RO=107;RPL=6;RPP=16.0391;RPPR=235.358;RPR=0;RUN=1;SAF=3;SAP=3.0103;SAR=3;SRF=103;SRP=201.913;SRR=4;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:46,2:46:1842:2:82:0,-6.66976,-158.152 0/0:25:25,0:25:997:0:0:0,-7.52575,-90.0252 0/0:12:12,0:12:482:0:0:0,-3.61236,-43.7296 0/1:28:24,4:24:947:4:150:-5.43261,0,-77.0936 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12408 25 . T A 1056.74 . AB=0.493506;ABP=3.0385;AC=4;AF=0.333333;AN=12;AO=38;CIGAR=1X;DP=129;DPB=129;DPRA=0.740385;EPP=85.5263;EPPR=200.614;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1496;QR=3490;RO=91;RPL=0;RPP=85.5263;RPPR=200.614;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=91;SRP=200.614;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:3,13:3:110:13:516:-41.9707,0,-5.44394 0/1:17:8,9:8:299:9:349:-26.6497,0,-22.144 0/1:20:13,7:13:505:7:279:-19.4603,0,-39.7734 0/1:24:15,9:15:567:9:352:-24.8155,0,-44.1391 0/0:28:28,0:28:1077:0:0:0,-8.42884,-97.2294 0/0:24:24,0:24:932:0:0:0,-7.22472,-84.1836 dDocent_Contig_12409 173 . A G 138.486 . AB=0.212121;ABP=26.7649;AC=1;AF=0.125;AN=8;AO=7;CIGAR=1X;DP=80;DPB=80;DPRA=2.10638;EPP=18.2106;EPPR=161.528;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=279;QR=2817;RO=73;RPL=7;RPP=18.2106;RPPR=161.528;RPR=0;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=161.528;SRR=73;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:550:0:0:0,-4.21442,-49.8425 0/0:10:10,0:10:398:0:0:0,-3.0103,-36.1793 0/1:33:26,7:26:996:7:279:-15.5475,0,-80.0161 0/0:23:23,0:23:873:0:0:0,-6.92369,-78.8747 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12410 49 . A T 1705.08 . AB=0.0833333;ABP=57.2971;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1M1X3M;DP=158;DPB=141.6;DPRA=0;EPP=9.52472;EPPR=161.528;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.575342;PAO=0;PQA=0;PQR=0;PRO=0;QA=122;QR=2861;RO=73;RPL=3;RPP=9.52472;RPPR=161.528;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=73;SRP=161.528;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:28:12,6,10,0:12:465:6,10,0:235,401,0:-29.4316,-13.7248,-50.1108,0,-18.8728,-35.1864,-33.0439,-51.917,-38.1967,-71.2392 0|0:52:30,15,7,0:30:1175:15,7,0:577,271,0:-38.3319,0,-92.1006,-25.1007,-74.3557,-119.611,-47.3628,-96.6161,-121.718,-143.979 0|0:27:18,4,5,0:18:719:4,5,0:161,196,0:-10.6934,-2.83824,-60.8598,0,-45.9478,-57.7123,-16.112,-62.0639,-59.2174,-75.3337 0|0:24:11,2,10,1:11:431:2,10,1:81,398,41:-29.4537,-26.085,-60.9216,0,-28.7499,-32.4204,-29.3802,-58.1389,-32.0455,-64.5179 0|0:15:1,4,10,0:1:40:4,10,0:163,391,0:-41.9912,-28.8402,-30.932,-10.1597,0,-10.443,-42.2922,-32.1361,-13.4533,-45.5876 0|1:12:1,0,9,2:1:31:0,9,2:0,340,81:-31.8276,-32.1287,-34.6111,-4.28525,-6.74221,-4.03294,-25.4446,-27.9263,0,-27.3243 dDocent_Contig_12411 57 . T C 101.96 . AB=0.25;ABP=13.8677;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=117;DPB=117;DPRA=28.75;EPP=20.3821;EPPR=239.701;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=316;QR=4351;RO=109;RPL=8;RPP=20.3821;RPPR=239.701;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=109;SRP=239.701;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:40,1:40:1599:1:41:0,-8.24766,-140.047 0/1:20:15,5:15:599:5:193:-11.7181,0,-48.2268 0/0:26:25,1:25:989:1:41:0,-3.73221,-85.2083 0/0:28:27,1:27:1088:1:41:0,-4.33427,-94.112 0/0:1:1,0:1:40:0:0:0,-0.30103,-3.99568 0/0:1:1,0:1:36:0:0:0,-0.30103,-3.59827 dDocent_Contig_12412 29 . A T 64.3685 . AB=0.122807;ABP=73.4498;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=347;DPB=347;DPRA=0.910569;EPP=42.0968;EPPR=717.425;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.388889;PAIREDR=0.841945;PAO=0;PQA=0;PQR=0;PRO=0;QA=672;QR=12927;RO=329;RPL=0;RPP=42.0968;RPPR=717.425;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=329;SRP=717.425;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:59,0:59:2323:0:0:0,-17.7608,-209.249 0/0:76:70,6:70:2712:6:221:0,-2.63709,-223.968 0/0:64:64,0:64:2524:0:0:0,-19.2659,-227.3 0/0:50:48,2:48:1899:2:56:0,-9.73478,-165.802 0/0:41:38,3:38:1494:3:120:0,-1.15454,-123.522 0/1:57:50,7:50:1975:7:275:-7.95968,0,-160.791 dDocent_Contig_12413 92 . G A 2630.83 . AB=0.339674;ABP=85.1722;AC=6;AF=0.5;AN=12;AO=125;CIGAR=1X;DP=368;DPB=368;DPRA=0;EPP=274.444;EPPR=530.678;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.512;PAIREDR=0.506173;PAO=0;PQA=0;PQR=0;PRO=0;QA=4258;QR=8580;RO=243;RPL=70;RPP=6.91895;RPPR=53.2759;RPR=55;RUN=1;SAF=70;SAP=6.91895;SAR=55;SRF=159;SRP=53.2759;SRR=84;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:56:37,19:37:1293:19:658:-42.6784,0,-99.7987 0/1:68:43,25:43:1547:25:864:-57.5998,0,-119.024 0/1:32:25,7:25:872:7:261:-14.2137,0,-69.1595 0/1:38:30,8:30:1059:8:243:-10.7289,0,-84.1687 0/1:82:54,28:54:1891:28:955:-61.5692,0,-145.742 0/1:92:54,38:54:1918:38:1277:-87.5147,0,-145.171 dDocent_Contig_12414 108 . T A 400.366 . AB=0.391304;ABP=7.73089;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=128;DPB=128;DPRA=0.833333;EPP=46.4397;EPPR=237.529;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.814815;PAO=0;PQA=0;PQR=0;PRO=0;QA=690;QR=3626;RO=108;RPL=0;RPP=46.4397;RPPR=237.529;RPR=20;RUN=1;SAF=0;SAP=46.4397;SAR=20;SRF=0;SRP=237.529;SRR=108;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:15,1:15:506:1:34:0,-1.41757,-42.4635 0/0:18:17,1:17:571:1:29:0,-2.51888,-48.8097 0/0:20:20,0:20:668:0:0:0,-6.0206,-60.4339 0/0:28:28,0:28:930:0:0:0,-8.42884,-84.0051 0/1:30:18,12:18:605:12:417:-28.8324,0,-45.7379 0/1:16:10,6:10:346:6:210:-14.426,0,-26.6581 dDocent_Contig_12417 14 . A C 310.129 . AB=0.233766;ABP=50.4161;AC=5;AF=0.416667;AN=12;AO=18;CIGAR=1X2M;DP=106;DPB=106;DPRA=0.531034;EPP=4.9405;EPPR=185.414;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=6.93889e-18;PAIRED=0;PAIREDR=0.845238;PAO=0;PQA=0;PQR=0;PRO=0;QA=665;QR=3170;RO=84;RPL=0;RPP=42.0968;RPPR=185.414;RPR=18;RUN=1;SAF=7;SAP=4.9405;SAR=11;SRF=84;SRP=185.414;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:14:9,2,0,3:9:324:2,0,3:71,0,102:-5.55551,-2.47364,-28.3147,-8.26478,-28.9168,-34.7019,0,-20.648,-26.4322,-25.5292 0|1:18:12,0,0,6:12:466:0,0,6:0,0,224:-15.0996,-18.7119,-57.0122,-18.7119,-57.0122,-57.0122,0,-38.6783,-38.6783,-36.8721 0|1:10:7,0,0,3:7:270:0,0,3:0,0,111:-7.34362,-9.45083,-31.6343,-9.45083,-31.6343,-31.6343,0,-22.5579,-22.5579,-21.6548 0|1:14:8,0,2,4:8:297:0,2,4:0,78,154:-10.2321,-12.6403,-36.9345,-6.22852,-30.5223,-29.9202,0,-24.288,-17.8741,-23.0839 0|0:29:29,0,0,0:29:1094:0,0,0:0,0,0:0,-8.72987,-98.7644,-8.72987,-98.7644,-98.7644,-8.72987,-98.7644,-98.7644,-98.7644 0|1:21:19,0,0,2:19:719:0,0,2:0,0,74:-0.704246,-6.42382,-65.3741,-6.42382,-65.3741,-65.3741,0,-59.3208,-59.3208,-58.7188 dDocent_Contig_12418 21 . C T 234.907 . AB=0.533333;ABP=3.15506;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=88;DPB=88;DPRA=1.0274;EPP=20.3821;EPPR=174.557;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0.708861;PAO=0;PQA=0;PQR=0;PRO=0;QA=324;QR=3141;RO=79;RPL=0;RPP=20.3821;RPPR=174.557;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=79;SRP=174.557;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:607:0:0:0,-4.51545,-54.9682 0/0:25:24,0:24:951:0:0:0,-7.22472,-85.778 0/0:10:10,0:10:389:0:0:0,-3.0103,-35.3583 0/0:13:13,0:13:520:0:0:0,-3.91339,-47.1475 0/0:10:10,0:10:396:0:0:0,-3.0103,-35.9974 0/1:15:7,8:7:278:8:324:-25.0135,0,-20.8729 dDocent_Contig_12419 45 . G T 728.59 . AB=0.543478;ABP=3.76559;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=1X;DP=355;DPB=355;DPRA=0.744337;EPP=57.2971;EPPR=719.596;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=977;QR=13006;RO=330;RPL=0;RPP=57.2971;RPPR=719.596;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=330;SRP=719.596;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:71:71,0:71:2781:0:0:0,-21.3731,-250.412 0/0:75:75,0:75:2945:0:0:0,-22.5772,-265.161 0/0:46:46,0:46:1828:0:0:0,-13.8474,-164.738 0/0:88:88,0:88:3493:0:0:0,-26.4906,-314.421 0/1:46:21,25:21:839:25:977:-74.3818,0,-61.9772 0/0:29:29,0:29:1120:0:0:0,-8.72987,-101.076 dDocent_Contig_12420 10 . G A 200.779 . AB=0.148148;ABP=32.0437;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=4M2X1M1X;DP=77;DPB=75.75;DPRA=0;EPP=11.6962;EPPR=107.241;GTI=0;LEN=1;MEANALT=2;MQM=40;MQMR=59.875;NS=6;NUMALT=6;ODDS=0;PAIRED=1;PAIREDR=0.854167;PAO=0;PQA=0;PQR=0;PRO=0;QA=158;QR=1834;RO=48;RPL=0;RPP=11.6962;RPPR=107.241;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=48;SRP=107.241;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:12:10,0,2,0,0,0,0:10:379:0,2,0,0,0,0:0,79,0,0,0,0:-3.3655,-6.3758,-37.4572,0,-31.4505,-30.8485,-6.3758,-37.4572,-31.4505,-37.4572,-6.3758,-37.4572,-31.4505,-37.4572,-37.4572,-6.3758,-37.4572,-31.4505,-37.4572,-37.4572,-37.4572,-6.3758,-37.4572,-31.4505,-37.4572,-37.4572,-37.4572,-37.4572 0|0:12:6,0,0,5,1,0,0:6:229:0,0,5,1,0,0:0,0,199,40,0,0:-3.79209,-5.59827,-24.4781,-5.59827,-24.4781,-24.4781,0,-18.7972,-18.7972,-17.2921,-2.53551,-21.4427,-21.4427,-15.7708,-21.1417,-5.59827,-24.4781,-24.4781,-18.7972,-21.4427,-24.4781,-5.59827,-24.4781,-24.4781,-18.7972,-21.4427,-24.4781,-24.4781 0|1:15:10,0,2,0,3,0,0:10:383:0,2,0,3,0,0:0,73,0,118,0,0:-5.99095,-9.00125,-40.4482,-3.38344,-34.8266,-34.2245,-9.00125,-40.4482,-34.8266,-40.4482,0,-31.4612,-25.8413,-31.4612,-30.5581,-9.00125,-40.4482,-34.8266,-40.4482,-31.4612,-40.4482,-9.00125,-40.4482,-34.8266,-40.4482,-31.4612,-40.4482,-40.4482 0|0:13:10,0,0,1,0,2,0:10:378:0,0,1,0,2,0:0,0,31,0,71,0:-2.92503,-5.93533,-36.996,-5.93533,-36.996,-36.996,-5.14736,-36.1517,-36.1517,-35.8506,-5.93533,-36.996,-36.996,-36.1517,-36.996,0,-31.211,-31.211,-30.3705,-31.211,-30.609,-5.93533,-36.996,-36.996,-36.1517,-36.996,-31.211,-36.996 0|0:12:4,0,7,0,0,0,1:4:155:0,7,0,0,0,1:0,276,0,0,0,22:-11.4415,-12.6456,-25.4314,0,-12.8679,-10.7607,-12.6456,-25.4314,-12.8679,-25.4314,-12.6456,-25.4314,-12.8679,-25.4314,-25.4314,-12.6456,-25.4314,-12.8679,-25.4314,-25.4314,-25.4314,-10.9685,-23.7583,-11.2224,-23.7583,-23.7583,-23.7583,-23.4573 0|0:13:8,2,1,0,0,0,2:8:310:2,1,0,0,0,2:77,39,0,0,0,82:-3.77035,-2.54108,-27.4187,-3.18649,-25.0421,-28.4074,-6.17859,-28.0208,-28.7084,-31.6892,-6.17859,-28.0208,-28.7084,-31.6892,-31.6892,-6.17859,-28.0208,-28.7084,-31.6892,-31.6892,-31.6892,0,-21.8817,-22.5646,-25.5457,-25.5457,-25.5457,-24.9437 dDocent_Contig_12421 26 . C T 92.4451 . AB=0.147059;ABP=76.5849;AC=3;AF=0.25;AN=12;AO=11;CIGAR=1X;DP=138;DPB=138;DPRA=1.41667;EPP=26.8965;EPPR=278.787;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.984252;PAO=0;PQA=0;PQR=0;PRO=0;QA=413;QR=4964;RO=127;RPL=0;RPP=26.8965;RPPR=278.787;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=127;SRP=278.787;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:861:0:0:0,-6.62266,-77.7994 0/0:34:33,1:33:1319:1:38:0,-6.43775,-115.179 0/0:14:14,0:14:525:0:0:0,-4.21442,-47.5748 0/1:18:16,2:16:617:2:80:-2.17304,0,-50.447 0/1:22:17,5:17:679:5:179:-9.83393,0,-54.8179 0/1:28:25,3:25:963:3:116:-2.38744,0,-78.5336 dDocent_Contig_12422 11 . C T 90.759 . AB=0.123077;ABP=83.2212;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X3M;DP=464;DPB=464;DPRA=1.70192;EPP=29.068;EPPR=865.085;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0.5;PAIREDR=0.483627;PAO=0;PQA=0;PQR=0;PRO=0;QA=465;QR=15660;RO=397;RPL=0;RPP=29.068;RPPR=865.085;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=397;SRP=865.085;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:58:46,5,0,0,3:46:1784:5,0,0,3:193,0,0,118:-1.9975,0,-145.041,-15.8449,-146.546,-162.396,-15.8449,-146.546,-162.396,-162.396,-6.13898,-136.84,-152.69,-152.69,-151.787 0|0:132:116,7,2,2,1:116:4596:7,2,2,1:272,81,79,40:0,-12.5736,-388.743,-28.239,-384.171,-405.92,-28.4186,-384.349,-400.021,-406.098,-31.6241,-387.555,-403.227,-403.405,-409.605 0|1:65:49,2,1,8,0:49:1928:2,1,8,0:79,41,308,0:-10.5317,-18.7808,-176.77,-21.8969,-173.988,-180.188,0,-152.084,-155.201,-156.177,-25.2822,-177.372,-180.489,-158.585,-183.873 0|0:72:62,3,5,1,0:62:2431:3,5,1,0:118,202,41,0:0,-8.96086,-207.945,-2.00847,-192.194,-200.396,-15.2789,-205.464,-198.516,-214.87,-18.6639,-208.848,-201.901,-215.171,-218.555 0|0:52:45,0,4,0,0:45:1777:0,4,0,0:0,163,0,0:0,-13.5463,-159.751,-0.098556,-146.303,-145.099,-13.5463,-159.751,-146.303,-159.751,-13.5463,-159.751,-146.303,-159.751,-159.751 0|0:85:79,1,3,1,1:79:3144:1,3,1,1:40,109,37,40:0,-20.4816,-279.065,-14.8978,-270.47,-272.862,-20.7557,-276.339,-270.738,-279.333,-20.4816,-276.071,-270.47,-276.339,-279.065 dDocent_Contig_12423 23 . C T 171.192 . AB=0.141509;ABP=121.335;AC=4;AF=0.333333;AN=12;AO=20;CIGAR=1X;DP=173;DPB=173;DPRA=0;EPP=46.4397;EPPR=335.246;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.575163;PAO=0;PQA=0;PQR=0;PRO=0;QA=783;QR=6094;RO=153;RPL=0;RPP=46.4397;RPPR=335.246;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=153;SRP=335.246;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:16,1:16:625:1:41:0,-1.02294,-52.4896 0/0:50:46,4:46:1847:4:160:0,-0.268583,-151.654 0/1:22:20,2:20:804:2:82:-1.15702,0,-66.0558 0/1:50:41,9:41:1652:9:344:-16.2541,0,-133.856 0/1:22:20,2:20:771:2:75:-0.496144,0,-63.0776 0/1:12:10,2:10:395:2:81:-4.07337,0,-32.2928 dDocent_Contig_12424 14 . G C 666.194 . AB=0.371429;ABP=13.0611;AC=4;AF=0.333333;AN=12;AO=26;CIGAR=1X;DP=554;DPB=554;DPRA=0.072314;EPP=59.4686;EPPR=1140.88;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996212;PAO=0;PQA=0;PQR=0;PRO=0;QA=1038;QR=21023;RO=528;RPL=0;RPP=59.4686;RPPR=1149.55;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=527;SRP=1140.88;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:15:9,6:9:363:6:243:-17.7321,0,-28.5188 0/1:7:4,3:4:148:3:121:-9.17278,0,-11.5719 0/1:26:18,8:18:706:8:308:-20.2538,0,-56.0378 0/1:22:13,9:13:498:9:366:-26.6825,0,-38.5356 0/0:224:224,0:224:8961:0:0:0,-67.4307,-805.941 0/0:260:260,0:260:10347:0:0:0,-78.2678,-930.538 dDocent_Contig_12425 7 . C G 776.821 . AB=0.207143;ABP=211.596;AC=4;AF=0.333333;AN=12;AO=63;CIGAR=1X;DP=421;DPB=421;DPRA=0;EPP=139.813;EPPR=773.883;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.952381;PAIREDR=0.997183;PAO=0;PQA=0;PQR=0;PRO=0;QA=2023;QR=13598;RO=355;RPL=0;RPP=139.813;RPPR=773.883;RPR=63;RUN=1;SAF=63;SAP=139.813;SAR=0;SRF=355;SRP=773.883;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:75:58,17:58:2224:17:550:-27.2268,0,-177.804 0/0:87:85,1:85:3255:1:17:0,-24.3286,-291.421 0/0:54:50,4:50:1919:4:142:0,-3.12918,-159.826 0/1:78:67,10:67:2573:10:343:-7.75436,0,-208.332 0/1:67:57,9:57:2158:9:298:-7.13751,0,-174.461 0/1:60:38,22:38:1469:22:673:-42.7853,0,-114.425 dDocent_Contig_12426 16 . A T 617.781 . AB=0.146707;ABP=365.113;AC=2;AF=0.166667;AN=12;AO=85;CIGAR=1X;DP=922;DPB=922;DPRA=0;EPP=187.585;EPPR=1818.36;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.995215;PAO=0;PQA=0;PQR=0;PRO=0;QA=3200;QR=32682;RO=836;RPL=0;RPP=187.585;RPPR=1818.36;RPR=85;RUN=1;SAF=85;SAP=187.585;SAR=0;SRF=836;SRP=1818.36;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:116:111,5:111:4318:5:197:0,-16.8129,-370.503 0/1:147:127,19:127:5016:19:683:-17.6924,0,-407.275 0/0:165:153,12:153:5980:12:438:0,-9.92106,-498.268 0/0:164:153,11:153:5962:11:427:0,-10.5881,-497.633 0/1:187:157,30:157:6121:30:1148:-47.3076,0,-494.424 0/0:143:135,8:135:5285:8:307:0,-15.057,-447.549 dDocent_Contig_12427 10 . G A 3404 . AB=0.35493;ABP=67.9037;AC=3;AF=0.3;AN=10;AO=135;CIGAR=1X;DP=508;DPB=508;DPRA=17.8929;EPP=296.159;EPPR=812.97;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5382;QR=14736;RO=373;RPL=0;RPP=296.159;RPPR=812.97;RPR=135;RUN=1;SAF=135;SAP=296.159;SAR=0;SRF=373;SRP=812.97;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:200:145,55:145:5700:55:2183:-136.441,0,-452.647 0/1:69:56,13:56:2209:13:507:-25.2021,0,-178.214 0/1:86:28,58:28:1124:58:2331:-184.057,0,-75.5531 0/0:146:137,9:137:5426:9:361:0,-11.0969,-455.352 ./.:.:.:.:.:.:.:. 0/0:7:7,0:7:277:0:0:0,-2.10721,-25.2994 dDocent_Contig_12429 19 . A G 275.207 . AB=0.194805;ABP=65.3062;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=238;DPB=238;DPRA=1.24528;EPP=37.7539;EPPR=485.077;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.25;PAIREDR=0.490991;PAO=0;PQA=0;PQR=0;PRO=0;QA=630;QR=8813;RO=222;RPL=0;RPP=37.7539;RPPR=485.077;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=222;SRP=485.077;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:30,7:30:1150:7:279:-14.3421,0,-92.6434 0/1:40:32,8:32:1259:8:312:-16.4004,0,-101.542 0/0:28:28,0:28:1119:0:0:0,-8.42884,-100.995 0/0:55:54,1:54:2155:1:39:0,-12.6601,-190.235 0/0:22:22,0:22:875:0:0:0,-6.62266,-79.0565 0/0:56:56,0:56:2255:0:0:0,-16.8577,-203.11 dDocent_Contig_12430 17 . G A 112.004 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=184;DPB=184;DPRA=1.34545;EPP=16.0391;EPPR=389.532;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.651685;PAO=0;PQA=0;PQR=0;PRO=0;QA=234;QR=7103;RO=178;RPL=0;RPP=16.0391;RPPR=389.532;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=178;SRP=389.532;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1197:0:0:0,-9.0309,-108.004 0/0:35:35,0:35:1386:0:0:0,-10.536,-124.996 0/0:71:68,3:68:2720:3:119:0,-10.2781,-233.823 0/0:34:34,0:34:1362:0:0:0,-10.235,-122.837 0/0:11:11,0:11:438:0:0:0,-3.31133,-39.7745 1/1:3:0,3:0:0:3:115:-10.7232,-0.90309,0 dDocent_Contig_12431 87 . C T 81.1102 . AB=0.266667;ABP=10.1038;AC=1;AF=0.125;AN=8;AO=4;CIGAR=1X1M1X;DP=94;DPB=94;DPRA=0.56962;EPP=11.6962;EPPR=196.271;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=155;QR=3051;RO=89;RPL=0;RPP=11.6962;RPPR=196.271;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=89;SRP=196.271;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:20:19,0:19:642:0:0:0,-5.71957,-58.0148 0|0:11:11,0:11:375:0:0:0,-3.31133,-34.0795 0|1:15:11,4:11:392:4:155:-9.80999,0,-31.1049 0|0:48:48,0:48:1642:0:0:0,-14.4494,-148.068 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_12432 19 . T C 1915.55 . AB=0.060241;ABP=142.429;AC=0;AF=0;AN=12;AO=5;CIGAR=2X;DP=171;DPB=171;DPRA=0;EPP=13.8677;EPPR=211.472;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.8125;PAO=0;PQA=0;PQR=0;PRO=0;QA=203;QR=3809;RO=96;RPL=0;RPP=13.8677;RPPR=211.472;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=96;SRP=211.472;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:37:29,0,8:29:1172:0,8:0,327:-18.662,-27.3919,-124.01,0,-97.0255,-94.6172 0|0:37:17,1,19:17:679:1,19:41,756:-57.1156,-58.8485,-114.473,0,-52.5298,-50.1949 0|0:46:19,4,23:19:730:4,23:162,915:-69.6021,-61.9625,-120.665,0,-46.5334,-52.9714 0|0:25:12,0,13:12:485:0,13:0,519:-39.53,-43.1423,-83.1297,0,-40.3887,-36.4753 0|0:14:10,0,4:10:397:0,4:0,158:-10.3849,-13.3952,-46.0746,0,-33.0745,-31.8704 0|0:12:9,0,3:9:346:0,3:0,119:-7.48214,-10.1914,-38.5766,0,-28.7784,-27.8753 dDocent_Contig_12434 30 . T C 496.657 . AB=0.252747;ABP=51.3315;AC=3;AF=0.25;AN=12;AO=23;CIGAR=1X1M1X;DP=152;DPB=152;DPRA=1.4918;EPP=52.9542;EPPR=283.13;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992248;PAO=0;PQA=0;PQR=0;PRO=0;QA=902;QR=5072;RO=129;RPL=0;RPP=52.9542;RPPR=283.13;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=129;SRP=283.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:18:18,0:18:696:0:0:0,-5.41854,-62.9676 0|1:27:18,9:18:710:9:355:-24.1829,0,-56.1023 0|1:54:42,12:42:1658:12:467:-26.1229,0,-133.203 0|0:27:27,0:27:1070:0:0:0,-8.12781,-96.5965 0|1:10:8,2:8:320:2:80:-4.58149,0,-26.1574 0|0:16:16,0:16:618:0:0:0,-4.81648,-55.9522 dDocent_Contig_12436 13 . G A 78.0014 . AB=0.235294;ABP=13.3567;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=198;DPB=198;DPRA=0.571429;EPP=13.8677;EPPR=422.104;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994819;PAO=0;PQA=0;PQR=0;PRO=0;QA=194;QR=7733;RO=193;RPL=0;RPP=13.8677;RPPR=422.104;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=193;SRP=422.104;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:17:13,4:13:524:4:153:-9.02199,0,-42.3898 0/0:27:26,1:26:1032:1:41:0,-4.03324,-89.0762 0/0:20:20,0:20:798:0:0:0,-6.0206,-72.1393 0/0:13:13,0:13:516:0:0:0,-3.91339,-46.7859 0/0:68:68,0:68:2727:0:0:0,-20.47,-245.542 0/0:53:53,0:53:2136:0:0:0,-15.9546,-192.413 dDocent_Contig_12437 89 . A T 741.657 . AB=0.350515;ABP=21.8372;AC=2;AF=0.25;AN=8;AO=34;CIGAR=1X;DP=221;DPB=221;DPRA=0.782258;EPP=76.8404;EPPR=409.076;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1179;QR=6293;RO=187;RPL=34;RPP=76.8404;RPPR=409.076;RPR=0;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=187;SRP=409.076;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:51:35,16:35:1151:16:551:-34.564,0,-88.5315 0/0:98:98,0:98:3294:0:0:0,-29.5009,-296.696 0/1:46:28,18:28:964:18:628:-42.9997,0,-73.2249 0/0:26:26,0:26:884:0:0:0,-7.82678,-79.8726 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12438 15 . T C 101.533 . AB=0.123596;ABP=112.535;AC=3;AF=0.25;AN=12;AO=11;CIGAR=1X;DP=163;DPB=163;DPRA=1.2027;EPP=26.8965;EPPR=333.074;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.545455;PAIREDR=0.677632;PAO=0;PQA=0;PQR=0;PRO=0;QA=443;QR=5806;RO=152;RPL=0;RPP=26.8965;RPPR=333.074;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=152;SRP=333.074;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:18,2:18:681:2:81:-1.66513,0,-55.5998 0/1:46:42,4:42:1609:4:160:-0.936424,0,-131.224 0/1:23:18,5:18:684:5:202:-11.6382,0,-54.963 0/0:40:40,0:40:1544:0:0:0,-12.0412,-139.227 0/0:22:22,0:22:838:0:0:0,-6.62266,-75.7405 0/0:12:12,0:12:450:0:0:0,-3.61236,-40.842 dDocent_Contig_12439 22 . T A 210.353 . AB=0.25;ABP=22.5536;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=124;DPB=124;DPRA=1.81538;EPP=24.725;EPPR=250.558;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=58.1754;NS=6;NUMALT=1;ODDS=0;PAIRED=0.7;PAIREDR=0.614035;PAO=0;PQA=0;PQR=0;PRO=0;QA=407;QR=4592;RO=114;RPL=0;RPP=24.725;RPPR=250.558;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=114;SRP=250.558;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:688:0:0:0,-5.11751,-60.6936 0/1:36:27,9:27:1089:9:367:-22.5582,0,-84.3167 0/0:12:12,0:12:484:0:0:0,-3.61236,-43.9108 0/0:23:22,1:22:870:1:40:0,-2.92801,-74.0539 0/0:18:18,0:18:737:0:0:0,-5.41854,-66.6519 0/0:18:18,0:18:724:0:0:0,-5.41854,-65.4836 dDocent_Contig_12440 11 . C T 245.557 . AB=0.235294;ABP=34.0496;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=140;DPB=140;DPRA=1.39189;EPP=33.4109;EPPR=276.616;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=550;QR=5071;RO=126;RPL=0;RPP=33.4109;RPPR=276.616;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=126;SRP=276.616;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:622:0:0:0,-4.81648,-56.3128 0/0:21:21,0:21:853:0:0:0,-6.32163,-77.0806 0/1:26:21,5:21:854:5:205:-11.0082,0,-69.3435 0/0:19:18,1:18:721:1:41:0,-1.625,-61.121 0/1:25:18,7:18:724:7:266:-16.7693,0,-57.9581 0/0:33:32,1:32:1297:1:38:0,-6.13672,-113.194 dDocent_Contig_12441 13 . C T 209.735 . AB=0.142857;ABP=80.5629;AC=7;AF=0.583333;AN=12;AO=13;CIGAR=1X;DP=89;DPB=89;DPRA=0.9125;EPP=31.2394;EPPR=168.042;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.894737;PAO=0;PQA=0;PQR=0;PRO=0;QA=504;QR=3080;RO=76;RPL=0;RPP=31.2394;RPPR=168.042;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=76;SRP=168.042;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:15,4:15:611:4:163:-9.33886,0,-49.6073 0/0:16:16,0:16:648:0:0:0,-4.81648,-58.6532 0/1:16:14,2:14:569:2:81:-2.86925,0,-46.736 0/1:35:31,4:31:1252:4:149:-3.23121,0,-102.413 1/1:2:0,2:0:0:2:70:-6.64712,-0.60206,0 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 dDocent_Contig_12442 24 . G A 109.1 . AB=0.140625;ABP=74.8046;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=173;DPB=173;DPRA=1.40278;EPP=29.068;EPPR=352.617;GTI=0;LEN=1;MEANALT=1;MQM=48.6667;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.416667;PAIREDR=0.962733;PAO=0;PQA=0;PQR=0;PRO=0;QA=483;QR=6262;RO=161;RPL=0;RPP=29.068;RPPR=352.617;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=161;SRP=352.617;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:787:0:0:0,-6.0206,-71.1483 0/0:37:34,3:34:1358:3:121:0,-1.44108,-112.784 0/1:21:16,5:16:642:5:204:-12.4224,0,-51.7927 0/0:27:27,0:27:1063:0:0:0,-8.12781,-95.959 0/0:25:25,0:25:889:0:0:0,-7.52575,-80.2964 0/1:43:39,4:39:1523:4:158:-1.16431,0,-124.368 dDocent_Contig_12444 106 . N T 220.504 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=8;CIGAR=2X;DP=8;DPB=8;DPRA=0;EPP=20.3821;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=231;QR=0;RO=0;RPL=0;RPP=20.3821;RPPR=0;RPR=8;RUN=1;SAF=0;SAP=20.3821;SAR=8;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:6:0,6:0:0:6:183:-16.7702,-1.80618,0 .:.:.:.:.:.:.:. 1|1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 1|1:1:0,1:0:0:1:19:-1.89997,-0.30103,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_12445 18 . C T 31.7164 . AB=0.222222;ABP=9.04217;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=1X;DP=87;DPB=87;DPRA=0.576923;EPP=7.35324;EPPR=187.585;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.6;PAO=0;PQA=0;PQR=0;PRO=0;QA=78;QR=3405;RO=85;RPL=0;RPP=7.35324;RPPR=187.585;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=85;SRP=187.585;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:920:0:0:0,-6.92369,-83.1044 0/0:33:33,0:33:1336:0:0:0,-9.93399,-120.496 0/0:6:6,0:6:236:0:0:0,-1.80618,-21.6095 0/0:14:14,0:14:559:0:0:0,-4.21442,-50.6501 0/0:2:2,0:2:82:0:0:0,-0.60206,-7.77968 0/1:9:7,2:7:272:2:78:-4.69403,0,-22.1333 dDocent_Contig_12446 49 . C G 2438.79 . AB=0.534591;ABP=4.6628;AC=3;AF=0.3;AN=10;AO=87;CIGAR=1X;DP=218;DPB=218;DPRA=7.53571;EPP=191.928;EPPR=287.473;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3373;QR=5230;RO=131;RPL=0;RPP=191.928;RPPR=287.473;RPR=87;RUN=1;SAF=87;SAP=191.928;SAR=0;SRF=131;SRP=287.473;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:53:12,41:12:478:41:1550:-123.779,0,-27.4167 0/0:52:50,2:50:1992:2:82:0,-7.87388,-171.692 0/1:44:25,19:25:1009:19:757:-55.2054,0,-77.8571 0/1:62:37,25:37:1465:25:984:-70.1957,0,-113.434 ./.:.:.:.:.:.:.:. 0/0:7:7,0:7:286:0:0:0,-2.10721,-26.1148 dDocent_Contig_12447 98 . N C 1031.91 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=34;CIGAR=1X;DP=34;DPB=34;DPRA=0;EPP=76.8404;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1136;QR=0;RO=0;RPL=34;RPP=76.8404;RPPR=0;RPR=0;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:33:0,33:0:0:33:1101:-99.3907,-9.93399,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12449 1 . N G 66.4848 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=70;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12450 22 . T A 197.975 . AB=0.138211;ABP=142.85;AC=3;AF=0.25;AN=12;AO=18;CIGAR=1X;DP=207;DPB=207;DPRA=1.85227;EPP=42.0968;EPPR=413.419;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.5;PAIREDR=0.455026;PAO=0;PQA=0;PQR=0;PRO=0;QA=700;QR=7499;RO=189;RPL=0;RPP=42.0968;RPPR=413.419;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=189;SRP=413.419;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:51:43,8:43:1721:8:312:-13.0869,0,-139.76 0/1:37:31,6:31:1233:6:230:-9.92641,0,-100.103 0/1:35:32,3:32:1276:3:123:-0.928738,0,-104.576 0/0:40:39,1:39:1569:1:35:0,-8.54257,-137.95 0/0:22:22,0:22:883:0:0:0,-6.62266,-79.7781 0/0:22:22,0:22:817:0:0:0,-6.62266,-73.8264 dDocent_Contig_12451 105 . N T 226.011 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=7;CIGAR=3X;DP=7;DPB=7.33333;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=1;PQA=35;PQR=0;PRO=0;QA=244;QR=0;RO=0;RPL=0;RPP=18.2106;RPPR=0;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:70:-6.29753,-0.60206,0 1|1:5:0,5:0:0:5:174:-16.002,-1.50515,0 dDocent_Contig_12452 7 . C T 203.106 . AB=0.136364;ABP=154.619;AC=2;AF=0.166667;AN=12;AO=18;CIGAR=1X;DP=420;DPB=420;DPRA=0.916667;EPP=42.0968;EPPR=875.942;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.944444;PAIREDR=0.957711;PAO=0;PQA=0;PQR=0;PRO=0;QA=695;QR=15467;RO=402;RPL=0;RPP=42.0968;RPPR=875.942;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=402;SRP=875.942;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:53:47,6:47:1813:6:230:-5.11174,0,-147.465 0/0:65:65,0:65:2457:0:0:0,-19.5669,-221.333 0/1:79:67,12:67:2586:12:465:-18.4206,0,-209.152 0/0:38:38,0:38:1451:0:0:0,-11.4391,-130.869 0/0:86:86,0:86:3330:0:0:0,-25.8886,-299.834 0/0:99:99,0:99:3830:0:0:0,-29.802,-344.798 dDocent_Contig_12453 13 . A C 20489.3 . AB=0.665706;ABP=251.29;AC=6;AF=0.5;AN=12;AO=693;CIGAR=1X4M;DP=1041;DPB=1041;DPRA=0;EPP=1507.84;EPPR=615.366;GTI=0;LEN=1;MEANALT=2.83333;MQM=55.1732;MQMR=58.7553;NS=6;NUMALT=2;ODDS=0;PAIRED=0.782107;PAIREDR=0.882979;PAO=0;PQA=0;PQR=0;PRO=0;QA=26423;QR=11110;RO=282;RPL=0;RPP=1507.84;RPPR=615.366;RPR=693;RUN=1;SAF=693;SAP=1507.84;SAR=0;SRF=282;SRP=615.366;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:142:44,4,92:44:1729:4,92:160,3355:-256.21,-256.273,-397.289,0,-129.021,-114.507 0|1:162:39,8,114:39:1535:8,114:322,4257:-332.456,-317.736,-441.602,0,-99.8015,-91.9436 0|1:227:53,14,158:53:2073:14,158:538,6148:-485.51,-457.306,-623.521,0,-126.275,-122.869 0|1:194:48,6,140:48:1897:6,140:242,5405:-425.349,-420.404,-574.701,0,-136.707,-113.958 0|1:147:35,6,103:35:1372:6,103:241,3892:-304.681,-295.357,-406.377,0,-92.9549,-81.8094 0|1:169:63,14,86:63:2504:14,86:547,3366:-255.944,-230.06,-416.062,0,-145.357,-164.32 dDocent_Contig_12454 40 . T C 17137.4 . AB=0.634;ABP=80.9922;AC=8;AF=0.666667;AN=12;AO=538;CIGAR=1X;DP=738;DPB=738;DPRA=0;EPP=1171.26;EPPR=437.305;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=21488;QR=7988;RO=200;RPL=0;RPP=1171.26;RPPR=437.305;RPR=538;RUN=1;SAF=538;SAP=1171.26;SAR=0;SRF=200;SRP=437.305;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:188:42,146:42:1688:146:5800:-465.194,0,-95.5493 1/1:102:7,95:7:284:95:3799:-315.972,-4.77107,0 0/1:133:21,112:21:812:112:4446:-360.044,0,-33.3449 1/1:136:10,126:10:403:126:5080:-420.423,-4.31112,0 0/1:68:46,22:46:1839:22:881:-59.1263,0,-145.249 0/1:111:74,37:74:2962:37:1482:-100.207,0,-233.253 dDocent_Contig_12455 26 . G T 128.049 . AB=0.141304;ABP=105.825;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=240;DPB=240;DPRA=1.16216;EPP=35.5824;EPPR=491.592;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=554;QR=8888;RO=225;RPL=0;RPP=35.5824;RPPR=491.592;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=225;SRP=491.592;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:43:43,0:43:1678:0:0:0,-12.9443,-151.254 0/0:37:35,2:35:1361:2:76:0,-3.9233,-115.527 0/1:49:41,8:41:1603:8:286:-11.3209,0,-129.755 0/1:43:38,5:38:1536:5:192:-4.70568,0,-125.532 0/0:36:36,0:36:1449:0:0:0,-10.8371,-130.659 0/0:32:32,0:32:1261:0:0:0,-9.63296,-113.759 dDocent_Contig_12456 11 . T A 582.4 . AB=0.2;ABP=131.996;AC=5;AF=0.416667;AN=12;AO=35;CIGAR=1X;DP=195;DPB=195;DPRA=0;EPP=79.0118;EPPR=333.291;GTI=0;LEN=1;MEANALT=1;MQM=49.7143;MQMR=58.975;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.98125;PAO=0;PQA=0;PQR=0;PRO=0;QA=1370;QR=6378;RO=160;RPL=0;RPP=79.0118;RPPR=350.446;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=158;SRP=333.291;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:19,12:19:753:12:483:-33.7912,0,-58.7581 0/1:36:30,6:30:1198:6:232:-9.98592,0,-97.2559 0/1:42:33,9:33:1313:9:343:-18.4608,0,-105.79 0/0:30:28,2:28:1107:2:77:0,-1.85164,-92.0786 0/1:37:33,4:33:1332:4:158:-3.20311,0,-109.003 0/1:19:17,2:17:675:2:77:-1.36714,0,-54.4255 dDocent_Contig_12457 58 . G A 267.223 . AB=0.182692;ABP=93.9616;AC=6;AF=0.5;AN=12;AO=19;CIGAR=1X;DP=104;DPB=104;DPRA=0;EPP=44.2683;EPPR=187.585;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=712;QR=3355;RO=85;RPL=19;RPP=44.2683;RPPR=187.585;RPR=0;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=85;SRP=187.585;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:5:4,1:4:141:1:23:-0.794764,0,-11.5281 0/1:14:11,3:11:436:3:121:-7.06578,0,-35.3786 0/1:37:33,4:33:1295:4:128:-0.691032,0,-105.682 0/1:11:8,3:8:320:3:120:-7.87598,0,-25.8563 0/1:21:19,2:19:759:2:82:-1.45805,0,-62.3096 0/1:16:10,6:10:404:6:238:-16.9745,0,-31.9034 dDocent_Contig_12459 19 . A G 50.3357 . AB=0.10101;ABP=139.901;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=625;DPB=625;DPRA=1.00966;EPP=39.9253;EPPR=1318.92;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=680;QR=24139;RO=606;RPL=0;RPP=39.9253;RPPR=1318.92;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=606;SRP=1318.92;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:78:76,0:76:3010:0:0:0,-22.8783,-270.589 0/0:87:85,2:85:3384:2:82:0,-18.4099,-296.839 0/0:150:146,4:146:5861:4:162:0,-30.1875,-512.309 0/0:82:81,1:81:3222:1:36:0,-21.0862,-286.448 0/0:129:129,0:129:5123:0:0:0,-38.8329,-460.946 0/1:99:89,10:89:3539:10:400:-6.55645,0,-288.744 dDocent_Contig_12462 29 . T C 326.812 . AB=0.164384;ABP=74.4309;AC=5;AF=0.416667;AN=12;AO=17;CIGAR=1X;DP=162;DPB=162;DPRA=0.389091;EPP=39.9253;EPPR=315.702;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993056;PAO=0;PQA=0;PQR=0;PRO=0;QA=689;QR=5754;RO=144;RPL=0;RPP=39.9253;RPPR=315.702;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=144;SRP=315.702;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:55:54,0:54:2141:0:0:0,-16.2556,-192.773 0/0:30:29,1:29:1155:1:41:0,-4.93633,-100.133 0/1:34:30,4:30:1214:4:163:-4.82341,0,-99.2962 0/1:28:25,3:25:1002:3:120:-2.75847,0,-82.044 0/1:11:6,5:6:242:5:201:-15.1587,0,-18.8451 1/1:4:0,4:0:0:4:164:-15.1499,-1.20412,0 dDocent_Contig_12463 19 . T A 333.081 . AB=0.157534;ABP=151.741;AC=3;AF=0.25;AN=12;AO=25;CIGAR=1X;DP=247;DPB=247;DPRA=1.62931;EPP=57.2971;EPPR=482.906;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.995475;PAO=0;PQA=0;PQR=0;PRO=0;QA=985;QR=8797;RO=221;RPL=0;RPP=57.2971;RPPR=482.906;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=221;SRP=482.906;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:34,8:34:1355:8:313:-15.8894,0,-109.568 0/1:29:26,3:26:1040:3:121:-2.55033,0,-85.1631 0/1:75:63,12:63:2502:12:470:-20.0704,0,-202.744 0/0:20:20,0:20:774:0:0:0,-6.0206,-69.9709 0/0:43:41,2:41:1636:2:81:0,-5.25856,-139.788 0/0:38:37,0:37:1490:0:0:0,-11.1381,-133.955 dDocent_Contig_12464 1 . N G 77.8076 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_12465 21 . T C 1193.7 . AB=0.232;ABP=158.974;AC=6;AF=0.5;AN=12;AO=58;CIGAR=1X2M1X;DP=250;DPB=250;DPRA=0;EPP=128.956;EPPR=413.419;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.994709;PAO=0;PQA=0;PQR=0;PRO=0;QA=2248;QR=7281;RO=189;RPL=0;RPP=128.956;RPPR=413.419;RPR=58;RUN=1;SAF=58;SAP=128.956;SAR=0;SRF=189;SRP=413.419;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:45:41,4:41:1573:4:159:-1.14598,0,-128.287 0|1:61:51,10:51:1984:10:396:-17.6364,0,-160.424 0|1:23:17,3:17:656:3:121:-4.86169,0,-52.9613 0|1:34:30,4:30:1166:4:155:-4.09042,0,-94.9968 0|1:45:19,26:19:748:26:988:-75.6716,0,-54.1009 0|1:42:31,11:31:1154:11:429:-26.3209,0,-91.5028 dDocent_Contig_12466 7 . C T 614.044 . AB=0.147335;ABP=347.621;AC=3;AF=0.25;AN=12;AO=51;CIGAR=1X;DP=487;DPB=487;DPRA=3.55833;EPP=113.755;EPPR=947.601;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.980392;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1952;QR=16763;RO=435;RPL=0;RPP=113.755;RPPR=947.601;RPR=51;RUN=1;SAF=51;SAP=113.755;SAR=0;SRF=435;SRP=947.601;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:87:75,12:75:2861:12:453:-14.9262,0,-231.469 0/1:97:80,17:80:3069:17:656:-30.1767,0,-247.168 0/0:108:103,4:103:3991:4:156:0,-17.9589,-344.91 0/1:135:117,18:117:4528:18:687:-21.5233,0,-366.925 0/0:39:39,0:39:1504:0:0:0,-11.7402,-135.634 0/0:21:21,0:21:810:0:0:0,-6.32163,-73.2254 dDocent_Contig_12467 13 . G A 217.017 . AB=0.777778;ABP=9.04217;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=87;DPB=87;DPRA=0.576923;EPP=18.2106;EPPR=176.728;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.775;NS=6;NUMALT=1;ODDS=8.67362e-19;PAIRED=1;PAIREDR=0.975;PAO=0;PQA=0;PQR=0;PRO=0;QA=284;QR=3124;RO=80;RPL=0;RPP=18.2106;RPPR=176.728;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=80;SRP=176.728;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:465:0:0:0,-3.61236,-42.1965 0/0:28:28,0:28:1086:0:0:0,-8.42884,-98.0355 0/0:18:18,0:18:702:0:0:0,-5.41854,-63.5034 0/0:19:19,0:19:751:0:0:0,-5.71957,-67.9159 0/1:9:2,7:2:82:7:284:-23.2241,0,-5.00209 0/0:1:1,0:1:38:0:0:0,-0.30103,-3.79727 dDocent_Contig_12468 7 . C A 45.1572 . AB=0.153846;ABP=30.0702;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=213;DPB=213;DPRA=0.695187;EPP=11.6962;EPPR=456.848;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.751196;PAO=0;PQA=0;PQR=0;PRO=0;QA=150;QR=8018;RO=209;RPL=0;RPP=11.6962;RPPR=456.848;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=209;SRP=456.848;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:729:0:0:0,-5.71957,-65.9401 0/0:46:46,0:46:1768:0:0:0,-13.8474,-159.371 0/0:62:62,0:62:2361:0:0:0,-18.6639,-212.706 0/0:45:45,0:45:1737:0:0:0,-13.5463,-156.586 0/1:26:22,4:22:845:4:150:-6.03859,0,-68.5449 0/0:15:15,0:15:578:0:0:0,-4.51545,-52.3629 dDocent_Contig_12469 12 . C A 414.703 . AB=0.150235;ABP=229.343;AC=3;AF=0.25;AN=12;AO=36;CIGAR=1M1X1M;DP=313;DPB=311;DPRA=1.02745;EPP=81.1833;EPPR=591.479;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.97786;PAO=0;PQA=0;PQR=0;PRO=0;QA=1321;QR=10538;RO=271;RPL=0;RPP=81.1833;RPPR=591.479;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=271;SRP=591.479;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:43:35,0,8:35:1358:0,8:0,305:-14.8633,-25.3993,-136.968,0,-111.951,-109.543 0|1:78:64,2,12:64:2466:2,12:74,440:-16.6908,-29.9023,-231.765,0,-196.411,-198.852 0|1:55:46,0,9:46:1776:0,9:0,326:-13.1257,-26.973,-172.826,0,-146.219,-143.509 0|0:49:45,0,4:45:1772:0,4:0,153:0,-13.5463,-159.321,-0.609537,-146.767,-145.563 0|0:51:51,0,0:51:2004:0,0:0,0:0,-15.3525,-180.566,-15.3525,-180.566,-180.566 0|0:37:30,4,3:30:1162:4,3:158,97:-4.01153,0,-94.3026,-5.25317,-87.6927,-99.792 dDocent_Contig_12470 50 . A T 209.589 . AB=0.243902;ABP=26.3669;AC=1;AF=0.125;AN=8;AO=10;CIGAR=1X;DP=194;DPB=194;DPRA=0.803922;EPP=24.725;EPPR=400.39;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.989071;PAO=0;PQA=0;PQR=0;PRO=0;QA=385;QR=7067;RO=183;RPL=10;RPP=24.725;RPPR=400.39;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=183;SRP=400.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:1023:0:0:0,-7.82678,-92.3646 0/0:77:76,0:76:2940:0:0:0,-22.8783,-264.334 0/0:50:50,0:50:1930:0:0:0,-15.0515,-173.915 0/1:41:31,10:31:1174:10:385:-22.6579,0,-93.6018 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12471 7 . C T 9310.03 . AB=0.0575758;ABP=564.066;AC=0;AF=0;AN=12;AO=19;CIGAR=1M2X5M1X2M;DP=606;DPB=613.636;DPRA=0;EPP=44.2683;EPPR=135.47;GTI=0;LEN=1;MEANALT=13;MQM=60;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=1;PAIREDR=1;PAO=3;PQA=51.375;PQR=51.375;PRO=3;QA=729;QR=2398;RO=61;RPL=0;RPP=44.2683;RPPR=135.47;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=61;SRP=135.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:83:12,5,0,0,7,5,0,5,0,38:12:473:5,0,0,7,5,0,5,0,38:183,0,0,260,190,0,195,0,1526:-122.139,-110.8,-148.211,-125.751,-149.716,-164.668,-125.751,-149.716,-164.668,-164.668,-104.477,-128.442,-143.393,-143.393,-141.286,-110.17,-134.136,-149.087,-149.087,-127.813,-147.582,-125.751,-149.716,-164.668,-164.668,-143.393,-149.087,-164.668,-109.722,-133.687,-148.639,-148.639,-127.364,-133.058,-148.639,-147.133,-125.751,-149.716,-164.668,-164.668,-143.393,-149.087,-164.668,-148.639,-164.668,0,-23.969,-38.9202,-38.9202,-17.646,-23.3392,-38.9202,-22.89,-38.9202,-27.4811 0|0:137:27,1,8,0,5,11,4,2,1,58:27:1060:1,8,0,5,11,4,2,1,58:39,308,0,176,424,159,71,40,2340:-184.761,-189.683,-276.56,-167.6,-251.573,-252.37,-192.889,-276.861,-254.778,-280.067,-178.565,-262.537,-240.454,-265.743,-264.238,-158.072,-242.045,-219.962,-245.251,-230.926,-241.939,-179.798,-263.77,-241.687,-266.976,-252.652,-232.159,-265.772,-187.105,-271.078,-248.995,-274.283,-259.959,-239.467,-261.192,-273.681,-189.594,-273.566,-251.483,-276.772,-262.448,-241.955,-263.681,-270.988,-276.471,0,-83.9739,-61.8911,-87.1797,-72.8563,-52.3632,-74.0883,-81.3964,-83.8845,-69.72 0|0:101:11,5,0,2,7,17,10,0,0,42:11:430:5,0,2,7,17,10,0,0,42:193,0,76,263,640,386,0,0,1689:-152.965,-140.426,-174.273,-156.277,-175.778,-191.629,-150.044,-169.546,-185.396,-184.794,-134.734,-154.236,-170.086,-163.853,-167.979,-103.842,-123.343,-139.193,-132.961,-117.651,-134.076,-124.579,-144.081,-159.931,-153.698,-138.388,-107.496,-156.921,-156.277,-175.778,-191.629,-185.396,-170.086,-139.193,-159.931,-191.629,-156.277,-175.778,-191.629,-185.396,-170.086,-139.193,-159.931,-191.629,-191.629,-17.0819,-36.5848,-52.4356,-46.2028,-30.8927,0,-20.7369,-52.4356,-52.4356,-39.7923 0|0:92:8,7,0,4,1,9,0,2,3,48:8:318:7,0,4,1,9,0,2,3,48:253,0,149,37,344,0,78,121,1923:-158.063,-139.826,-163.902,-160.471,-166.009,-186.653,-148.276,-153.814,-174.458,-173.254,-157.444,-162.982,-183.627,-171.432,-183.326,-132.245,-137.784,-158.428,-146.233,-155.401,-155.719,-160.471,-166.009,-186.653,-174.458,-183.627,-158.428,-186.653,-154.059,-159.597,-180.242,-168.047,-177.215,-152.016,-180.242,-179.64,-150.496,-156.034,-176.679,-164.484,-173.652,-148.453,-176.679,-170.267,-175.776,-2.04104,-7.58328,-28.2262,-16.0314,-25.1996,0,-28.2262,-21.8142,-18.2506,-13.7768 0|0:94:0,0,5,12,2,4,0,13,9,35:0:0:0,5,12,2,4,0,13,9,35:0,191,459,76,156,0,492,360,1406:-156.189,-156.189,-156.189,-140.519,-140.519,-139.013,-118.525,-118.525,-102.855,-114.913,-149.957,-149.957,-134.286,-112.293,-149.354,-143.366,-143.366,-127.695,-105.702,-137.133,-142.162,-156.189,-156.189,-140.519,-118.525,-149.957,-143.366,-156.189,-115.86,-115.86,-100.19,-78.1967,-109.627,-103.037,-115.86,-111.947,-126.534,-126.534,-110.863,-88.87,-120.301,-113.711,-126.534,-86.205,-123.825,-40.3292,-40.3292,-24.6583,-2.6646,-34.0964,-27.5054,-40.3292,0,-10.6723,-29.7932 0|0:99:3,2,6,6,5,3,5,11,6,44:3:117:2,6,6,5,3,5,11,6,44:69,230,232,190,115,194,408,239,1763:-168.107,-163.406,-172.421,-150.133,-154.146,-157.944,-149.954,-153.967,-140.694,-157.765,-153.429,-157.442,-144.169,-143.99,-161.541,-159.571,-163.585,-150.312,-150.133,-153.608,-168.286,-153.071,-157.084,-143.811,-143.632,-147.107,-153.25,-161.183,-135.63,-139.643,-126.37,-126.191,-129.666,-135.809,-129.308,-141.936,-149.33,-153.343,-140.07,-139.891,-143.366,-149.509,-143.008,-125.567,-157.141,-23.7624,-27.7766,-14.5023,-14.3231,-17.7986,-23.9415,-17.4403,0,-13.6984,-20.1354 dDocent_Contig_12474 8 . A G 539.445 . AB=0.252525;ABP=55.674;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=1X;DP=222;DPB=222;DPRA=4.02439;EPP=57.2971;EPPR=430.79;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8985;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.93401;PAO=0;PQA=0;PQR=0;PRO=0;QA=944;QR=7556;RO=197;RPL=0;RPP=57.2971;RPPR=430.79;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=197;SRP=430.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1036:0:0:0,-8.12781,-93.5497 0/0:40:40,0:40:1541:0:0:0,-12.0412,-138.949 0/0:39:39,0:39:1500:0:0:0,-11.7402,-135.273 0/0:15:15,0:15:560:0:0:0,-4.51545,-50.7193 0/0:2:2,0:2:78:0:0:0,-0.60206,-7.40347 0/1:99:74,25:74:2841:25:944:-55.4672,0,-226.065 dDocent_Contig_12475 21 . C A 991.88 . AB=0.238889;ABP=109.605;AC=2;AF=0.2;AN=10;AO=47;CIGAR=1X;DP=447;DPB=447;DPRA=1.04598;EPP=105.07;EPPR=871.599;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1898;QR=15997;RO=400;RPL=0;RPP=105.07;RPPR=871.599;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=400;SRP=871.599;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:137:137,0:137:5469:0:0:0,-41.2411,-492.033 0/1:93:82,11:82:3296:11:440:-11.9582,0,-268.69 0/0:93:89,4:89:3565:4:164:0,-12.8459,-305.72 0/0:37:37,0:37:1487:0:0:0,-11.1381,-134.066 0/1:87:55,32:55:2180:32:1294:-90.5309,0,-170.182 ./.:.:.:.:.:.:.:. dDocent_Contig_12476 38 . G A 5256.32 . AB=0.397516;ABP=47.0737;AC=6;AF=0.5;AN=12;AO=192;CIGAR=1M1X2M;DP=483;DPB=470;DPRA=0;EPP=419.933;EPPR=574.108;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.479167;PAIREDR=0.463878;PAO=0;PQA=0;PQR=0;PRO=0;QA=7489;QR=9289;RO=263;RPL=0;RPP=419.933;RPPR=574.108;RPR=192;RUN=1;SAF=192;SAP=419.933;SAR=0;SRF=263;SRP=574.108;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:81:51,4,26:51:1807:4,26:95,1011:-67.8527,-75.8801,-221.854,0,-139.972,-139.482 0|1:102:39,4,58:39:1363:4,58:133,2251:-173.231,-174.213,-283.865,0,-100.114,-93.414 0|1:71:32,6,33:32:1126:6,33:150,1294:-96.8902,-94.8556,-184.687,0,-80.0699,-81.8092 0|1:90:56,10,24:56:1975:10,24:250,950:-61.4286,-58.8437,-216.611,0,-141.425,-153.67 0|1:73:58,0,14:58:2085:0,14:0,547:-27.5069,-44.9666,-215.035,0,-170.063,-165.849 0|1:66:27,2,37:27:933:2,37:58,1436:-109.945,-113.46,-188.642,0,-71.2394,-64.7147 dDocent_Contig_12478 120 . T A 75.0894 . AB=0.152778;ABP=78.4086;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=2X;DP=252;DPB=252;DPRA=0.869565;EPP=39.9253;EPPR=513.306;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.647059;PAIREDR=0.846809;PAO=0;PQA=0;PQR=0;PRO=0;QA=555;QR=8095;RO=235;RPL=0;RPP=39.9253;RPPR=513.306;RPR=17;RUN=1;SAF=0;SAP=39.9253;SAR=17;SRF=0;SRP=513.306;SRR=235;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:39:33,6:33:1141:6:188:-5.48881,0,-91.2578 0|1:33:28,5:28:977:5:165:-5.24191,0,-78.3109 0|0:59:55,4:55:1911:4:137:0,-5.09256,-159.604 0|0:29:27,2:27:934:2:65:0,-2.55642,-78.2016 0|0:31:31,0:31:1066:0:0:0,-9.33193,-96.2486 0|0:61:61,0:61:2066:0:0:0,-18.3628,-186.213 dDocent_Contig_12479 7 . C T 74.9563 . AB=0.111111;ABP=144.88;AC=2;AF=0.166667;AN=12;AO=19;CIGAR=2X;DP=346;DPB=346;DPRA=2.16154;EPP=44.2683;EPPR=706.567;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.987654;PAO=0;PQA=0;PQR=0;PRO=0;QA=720;QR=12292;RO=324;RPL=0;RPP=44.2683;RPPR=706.567;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=324;SRP=706.567;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:105:101,3:101:3814:3:110:0,-21.2586,-333.176 0|1:79:72,7:72:2733:7:267:-0.611804,0,-222.379 0|0:68:64,4:64:2435:4:151:0,-6.51269,-205.405 0|1:29:23,5:23:872:5:192:-9.01555,0,-70.1942 0|0:49:48,0:48:1825:0:0:0,-14.4494,-164.398 0|0:16:16,0:16:613:0:0:0,-4.81648,-55.5091 dDocent_Contig_12480 38 . A C 3988.82 . AB=0.169713;ABP=365.918;AC=2;AF=0.166667;AN=12;AO=65;CIGAR=3M1X7M6D19M;DP=383;DPB=347.417;DPRA=0;EPP=144.156;EPPR=128.956;GTI=0;LEN=1;MEANALT=10.3333;MQM=60;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=0.907692;PAIREDR=0.948276;PAO=0;PQA=0;PQR=0;PRO=0;QA=2352;QR=2203;RO=58;RPL=65;RPP=144.156;RPPR=128.956;RPR=0;RUN=1;SAF=65;SAP=144.156;SAR=0;SRF=58;SRP=128.956;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:59:12,16,0,9,5,5,0,1,5,0:12:464:16,0,9,5,5,0,1,5,0:628,0,331,196,173,0,40,182,0:-48.0517,0,-33.3077,-51.6641,-38.1242,-89.7819,-24.6049,-11.0636,-62.724,-60.0147,-35.5422,-22.0013,-73.6613,-46.6029,-72.1562,-37.6119,-24.0716,-75.7298,-48.6722,-59.6092,-74.2247,-51.6641,-38.1242,-89.7819,-62.724,-73.6613,-75.7298,-89.7819,-48.3682,-34.8281,-86.4863,-59.4282,-70.3656,-72.4342,-86.4863,-86.1853,-36.8013,-23.2608,-74.9197,-47.8618,-58.7989,-60.8678,-74.9197,-71.624,-73.4146,-51.6641,-38.1242,-89.7819,-62.724,-73.6613,-75.7298,-89.7819,-86.4863,-74.9197,-89.7819 0|1:105:19,26,6,23,4,11,2,1,3,0:19:720:26,6,23,4,11,2,1,3,0:1004,221,795,153,391,81,38,115,0:-82.2646,-5.53001,-56.7417,-69.9191,-46.503,-127.148,-23.4168,0,-64.3867,-75.5274,-75.4276,-52.0116,-116.398,-69.8949,-133.258,-56.1265,-32.7103,-97.0966,-50.5948,-102.605,-111.85,-81.3039,-57.888,-122.274,-75.771,-127.782,-108.481,-139.737,-84.8674,-61.4517,-125.837,-79.3344,-131.346,-112.045,-137.222,-143.601,-78.5452,-55.1293,-119.515,-73.0125,-125.024,-105.723,-130.9,-134.463,-136.677,-87.9841,-64.5685,-128.954,-82.4511,-134.462,-115.161,-140.339,-143.902,-137.58,-147.019 0|0:61:6,12,2,9,7,20,0,0,1,0:6:224:12,2,9,7,20,0,0,1,0:471,71,353,247,740,0,0,41,0:-79.1118,-42.1784,-56.9045,-75.1352,-54.7341,-92.8712,-51.8858,-31.4835,-64.4415,-67.515,-60.8183,-40.4171,-73.3735,-50.1244,-77.0488,-20.4029,0,-32.9579,-9.70777,-18.6427,-32.7195,-80.9179,-60.5169,-93.4733,-70.2242,-79.156,-38.7401,-99.2561,-80.9179,-60.5169,-93.4733,-70.2242,-79.156,-38.7401,-99.2561,-99.2561,-77.5333,-57.1321,-90.0887,-66.8395,-75.7714,-35.3554,-95.8715,-95.8715,-95.5705,-80.9179,-60.5169,-93.4733,-70.2242,-79.156,-38.7401,-99.2561,-99.2561,-95.8715,-99.2561 0|0:57:21,12,2,3,4,11,0,1,1,0:21:795:12,2,3,4,11,0,1,1,0:474,79,113,153,403,0,40,41,0:-32.6987,0,-61.5665,-32.5176,-58.6765,-97.0872,-29.761,-55.9196,-88.4305,-94.0293,-26.4633,-52.6222,-85.1334,-82.3766,-90.4312,-6.08862,-32.2466,-64.7586,-62.002,-58.7047,-67.9493,-39.0203,-65.1789,-97.6893,-94.9324,-91.6353,-71.2607,-104.191,-35.7243,-61.883,-94.3936,-91.6368,-88.3397,-67.965,-100.896,-100.594,-35.635,-61.7937,-94.3045,-91.5476,-88.2505,-67.8757,-100.806,-97.5107,-100.505,-39.0203,-65.1789,-97.6893,-94.9324,-91.6353,-71.2607,-104.191,-100.896,-100.806,-104.191 0|0:59:0,0,0,6,0,18,13,5,0,10:0:0:0,0,6,0,18,13,5,0,10:0,0,229,0,675,503,194,0,344:-96.5995,-96.5995,-96.5995,-96.5995,-96.5995,-96.5995,-77.812,-77.812,-77.812,-76.0058,-96.5995,-96.5995,-96.5995,-77.812,-96.5995,-41.3197,-41.3197,-41.3197,-22.5313,-41.3197,-35.9012,-55.2834,-55.2834,-55.2834,-36.4949,-55.2834,0,-51.37,-80.6582,-80.6582,-80.6582,-61.8704,-80.6582,-25.3774,-39.3411,-79.153,-96.5995,-96.5995,-96.5995,-77.812,-96.5995,-41.3197,-55.2834,-80.6582,-96.5995,-68.6684,-68.6684,-68.6684,-49.8814,-68.6684,-13.3912,-27.3531,-52.7274,-68.6684,-65.6581 1|0:42:0,2,0,15,0,6,9,0,5,4:0:0:2,0,15,0,6,9,0,5,4:76,0,531,0,206,343,0,203,133:-71.3776,-65.1439,-64.5419,-71.3776,-65.1439,-71.3776,-28.1389,-21.9053,-28.1389,-23.6235,-71.3776,-65.1439,-71.3776,-28.1389,-71.3776,-54.6565,-48.4229,-54.6565,-11.4221,-54.6565,-52.8503,-43.2394,-37.0052,-43.2394,0,-43.2394,-26.5185,-40.5301,-71.3776,-65.1439,-71.3776,-28.1389,-71.3776,-54.6565,-43.2394,-71.3776,-54.6297,-48.3956,-54.6297,-11.3886,-54.6297,-37.908,-26.4889,-54.6297,-53.1245,-60.621,-54.3875,-60.621,-17.3856,-60.621,-43.901,-32.4833,-60.621,-43.8729,-59.4169 dDocent_Contig_12481 93 . G A 190.246 . AB=0.5;ABP=3.0103;AC=1;AF=0.125;AN=8;AO=8;CIGAR=1X;DP=60;DPB=60;DPRA=1.09091;EPP=20.3821;EPPR=115.927;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=280;QR=1789;RO=52;RPL=8;RPP=20.3821;RPPR=115.927;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=52;SRP=115.927;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:469:0:0:0,-4.21442,-42.5313 0/0:25:25,0:25:873:0:0:0,-7.52575,-78.8887 0/0:5:5,0:5:172:0:0:0,-1.50515,-15.8183 0/1:16:8,8:8:275:8:280:-20.7235,0,-20.2684 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12483 16 . T C 2311.61 . AB=0.545455;ABP=5.57659;AC=6;AF=0.6;AN=10;AO=78;CIGAR=1X4M;DP=144;DPB=144;DPRA=35.75;EPP=172.385;EPPR=131.127;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=5;NUMALT=2;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3096;QR=2293;RO=59;RPL=0;RPP=172.385;RPPR=131.127;RPR=78;RUN=1;SAF=78;SAP=172.385;SAR=0;SRF=59;SRP=131.127;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:30:13,0,17:13:483:0,17:0,669:-51.5097,-55.4231,-94.9346,0,-39.8922,-34.7747 0|1:35:15,5,14:15:591:5,14:197,560:-41.6517,-29.9566,-77.078,0,-32.4422,-44.4392 0|1:48:15,0,33:15:594:0,33:0,1312:-103.892,-108.408,-157.297,0,-49.2856,-39.3516 0|1:30:16,0,14:16:625:0,14:0,555:-41.2605,-46.077,-97.454,0,-51.7703,-47.5559 1|1:1:0,0,0:0:0:0,0:0,0:0,0,0,0,0,0 .:.:.:.:.:.:.:. dDocent_Contig_12485 7 . C A 939.007 . AB=0.174648;ABP=329.41;AC=6;AF=0.5;AN=12;AO=62;CIGAR=1X;DP=355;DPB=355;DPRA=0;EPP=137.642;EPPR=639.252;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.951613;PAIREDR=0.952218;PAO=0;PQA=0;PQR=0;PRO=0;QA=2332;QR=11270;RO=293;RPL=0;RPP=137.642;RPPR=639.252;RPR=62;RUN=1;SAF=62;SAP=137.642;SAR=0;SRF=293;SRP=639.252;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:55:48,7:48:1851:7:263:-7.47047,0,-150.281 0/1:90:70,20:70:2706:20:733:-39.1945,0,-216.627 0/1:55:42,13:42:1616:13:497:-28.5206,0,-129.147 0/1:53:47,6:47:1807:6:232:-5.29434,0,-146.926 0/1:48:39,9:39:1500:9:339:-16.4144,0,-120.825 0/1:54:47,7:47:1790:7:268:-8.22821,0,-145.092 dDocent_Contig_12486 24 . T C 621.219 . AB=0.185185;ABP=165.71;AC=3;AF=0.25;AN=12;AO=42;CIGAR=1X;DP=421;DPB=421;DPRA=0;EPP=94.2121;EPPR=825.998;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1652;QR=14167;RO=379;RPL=0;RPP=94.2121;RPPR=825.998;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=379;SRP=825.998;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:55:48,7:48:1824:7:278:-8.83173,0,-147.851 0/1:83:65,18:65:2408:18:719:-40.0473,0,-191.947 0/0:26:24,2:24:919:2:81:0,-0.141046,-75.3376 0/1:51:41,10:41:1579:10:372:-18.4642,0,-127.023 0/0:111:108,3:108:3948:3:120:0,-22.227,-344.232 0/0:95:93,2:93:3489:2:82:0,-20.8182,-306.359 dDocent_Contig_12487 26 . C T 2965.16 . AB=0.278422;ABP=186.81;AC=6;AF=0.5;AN=12;AO=120;CIGAR=1X;DP=431;DPB=431;DPRA=0;EPP=263.587;EPPR=678.338;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.591667;PAIREDR=0.495177;PAO=0;PQA=0;PQR=0;PRO=0;QA=4840;QR=12398;RO=311;RPL=0;RPP=263.587;RPPR=678.338;RPR=120;RUN=1;SAF=120;SAP=263.587;SAR=0;SRF=311;SRP=678.338;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:76:58,18:58:2305:18:730:-43.1451,0,-184.726 0/1:91:74,17:74:2976:17:682:-34.3157,0,-240.532 0/1:65:54,11:54:2115:11:438:-20.2071,0,-170.962 0/1:64:55,9:55:2201:9:357:-13.2233,0,-178.992 0/1:61:38,23:38:1538:23:928:-65.4585,0,-120.294 0/1:74:32,42:32:1263:42:1705:-131.388,0,-91.6633 dDocent_Contig_12488 7 . C T 3106.12 . AB=0.450549;ABP=10.7417;AC=4;AF=0.333333;AN=12;AO=164;CIGAR=2X3M5X3M1X3M2X4M;DP=364;DPB=364;DPRA=0;EPP=359.132;EPPR=307.016;GTI=0;LEN=1;MEANALT=3.16667;MQM=33.9024;MQMR=60;NS=6;NUMALT=4;ODDS=5.55112e-17;PAIRED=0.603659;PAIREDR=0.992857;PAO=0;PQA=0;PQR=0;PRO=0;QA=4445;QR=5423;RO=140;RPL=0;RPP=359.132;RPPR=307.016;RPR=164;RUN=1;SAF=164;SAP=359.132;SAR=0;SRF=140;SRP=307.016;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:57:41,3,3,9,0:41:1604:3,3,9,0:121,59,342,0:-15.7694,-18.1203,-149.162,-24.2714,-146.201,-155.273,0,-122.017,-128.131,-129.284,-28.1117,-150.065,-156.176,-131.994,-160.041 0|0:123:51,11,53,8,0:51:1953:11,53,8,0:437,704,301,0:-20.6635,0,-157.061,-0.788912,-125.068,-145.093,-11.3336,-135.704,-136.391,-169.288,-36.0161,-160.372,-161.048,-171.696,-196.362 0|1:43:23,6,12,2,0:23:893:6,12,2,0:237,438,80,0:-28.2729,-15.6856,-87.2678,0,-53.8651,-69.756,-28.6036,-82.4826,-66.7776,-101.385,-35.1966,-89.074,-73.3684,-101.987,-108.578 1|0:34:8,2,12,11,0:8:318:2,12,11,0:81,379,418,0:-35.1111,-30.8354,-56.4292,-8.07809,-27.5848,-30.6533,-3.22181,-22.7452,0,-26.1183,-37.5193,-57.0312,-34.2657,-29.4296,-63.7133 0|1:39:8,0,29,1,0:8:306:0,29,1,0:0,910,40,0:-68.3176,-70.7258,-95.8491,0,-25.0998,-16.37,-67.4278,-92.5521,-21.8031,-92.2511,-70.7258,-95.8491,-25.0998,-92.5521,-95.8491 0|1:68:9,0,55,0,4:9:349:0,55,0,4:0,1955,0,164:-153.688,-156.397,-185.076,0,-28.6585,-12.1018,-156.397,-185.076,-28.6585,-185.076,-142.857,-171.536,-15.1154,-171.536,-170.332 dDocent_Contig_12489 88 . C T 418.642 . AB=0.339286;ABP=15.5738;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X;DP=174;DPB=174;DPRA=0.880952;EPP=50.7827;EPPR=330.903;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993377;PAO=0;PQA=0;PQR=0;PRO=0;QA=778;QR=5189;RO=151;RPL=22;RPP=50.7827;RPPR=330.903;RPR=0;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=151;SRP=330.903;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:21,17:21:728:17:602:-43.0711,0,-54.4028 0/0:27:26,1:26:905:1:35:0,-4.62918,-78.2685 0/1:18:16,2:16:533:2:71:-1.32352,0,-42.867 0/0:28:25,2:25:865:2:70:0,-1.64377,-71.6023 0/0:34:34,0:34:1171:0:0:0,-10.235,-105.696 0/0:29:29,0:29:987:0:0:0,-8.72987,-89.139 dDocent_Contig_12490 106 . N A 2018.66 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=66;CIGAR=2X;DP=66;DPB=66;DPRA=0;EPP=146.327;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2222;QR=0;RO=0;RPL=0;RPP=146.327;RPPR=0;RPR=66;RUN=1;SAF=0;SAP=146.327;SAR=66;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 .:.:.:.:.:.:.:. 1|1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1|1:39:0,39:0:0:39:1330:-120,-11.7402,0 1|1:25:0,25:0:0:25:824:-74.4649,-7.52575,0 dDocent_Contig_12491 13 . G A 155.87 . AB=0.173077;ABP=51.2838;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=2X;DP=290;DPB=290;DPRA=1.74194;EPP=29.068;EPPR=606.68;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=481;QR=11001;RO=278;RPL=0;RPP=29.068;RPPR=606.68;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=278;SRP=606.68;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:64:64,0:64:2552:0:0:0,-19.2659,-229.815 0|0:83:80,3:80:3155:3:121:0,-13.7053,-272.74 0|1:52:43,9:43:1714:9:360:-17.1099,0,-138.834 0|0:34:34,0:34:1343:0:0:0,-10.235,-121.13 0|0:17:17,0:17:683:0:0:0,-5.11751,-61.8018 0|0:40:40,0:40:1554:0:0:0,-12.0412,-140.101 dDocent_Contig_12492 40 . A G 143.314 . AB=0.205128;ABP=32.4644;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=146;DPB=146;DPRA=1.12222;EPP=26.8965;EPPR=296.159;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=439;QR=5297;RO=135;RPL=0;RPP=26.8965;RPPR=296.159;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=135;SRP=296.159;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:36,2:36:1425:2:82:0,-3.65946,-120.725 0/0:37:37,0:37:1431:0:0:0,-11.1381,-129.037 0/1:22:19,3:19:745:3:123:-4.84213,0,-60.7451 0/1:17:12,5:12:479:5:194:-12.711,0,-38.3432 0/0:24:23,1:23:923:1:40:0,-3.22904,-79.3785 0/0:8:8,0:8:294:0:0:0,-2.40824,-26.8064 dDocent_Contig_12493 22 . G A 95.3984 . AB=0.208333;ABP=20.744;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=193;DPB=193;DPRA=0.710059;EPP=13.8677;EPPR=411.247;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.452128;PAO=0;PQA=0;PQR=0;PRO=0;QA=199;QR=7491;RO=188;RPL=0;RPP=13.8677;RPPR=411.247;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=188;SRP=411.247;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1120:0:0:0,-8.42884,-101.081 0/0:47:47,0:47:1844:0:0:0,-14.1484,-166.166 0/0:19:19,0:19:766:0:0:0,-5.71957,-69.2597 0/0:48:48,0:48:1909:0:0:0,-14.4494,-172.011 0/1:24:19,5:19:756:5:199:-11.0627,0,-61.1328 0/0:27:27,0:27:1096:0:0:0,-8.12781,-98.9213 dDocent_Contig_12494 17 . A G 54.7887 . AB=0.6;ABP=3.44459;AC=1;AF=0.0833333;AN=12;AO=38;CIGAR=1X;DP=1147;DPB=1147;DPRA=0;EPP=85.5263;EPPR=2402.5;GTI=0;LEN=1;MEANALT=1;MQM=44.1316;MQMR=59.422;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0;PAIREDR=0.932372;PAO=0;PQA=0;PQR=0;PRO=0;QA=1458;QR=43985;RO=1109;RPL=0;RPP=85.5263;RPPR=2411.17;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=1108;SRP=2402.5;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:463:460,3:460:18217:3:116:0,-131.133,-1629.86 0/0:312:300,12:300:11879:12:464:0,-59.3209,-1029.72 0/0:158:153,5:153:6085:5:169:0,-32.1873,-509.182 0/0:195:181,14:181:7217:14:557:0,-10.4224,-599.092 0/1:5:2,3:2:81:3:114:-7.00147,0,-6.18058 0/0:14:13,1:13:506:1:38:0,-0.435655,-42.1035 dDocent_Contig_12495 45 . C T 34.4083 . AB=0.133333;ABP=73.0765;AC=1;AF=0.0833333;AN=12;AO=27;CIGAR=1X;DP=498;DPB=498;DPRA=1.18333;EPP=61.6401;EPPR=52.13;GTI=0;LEN=1;MEANALT=1.2;MQM=40.4815;MQMR=59.4542;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.54371;PAO=0;PQA=0;PQR=0;PRO=0;QA=896;QR=16840;RO=469;RPL=0;RPP=61.6401;RPPR=1021.43;RPR=27;RUN=1;SAF=0;SAP=61.6401;SAR=27;SRF=183;SRP=52.13;SRR=286;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:87:82,5:82:2936:5:157:0,-11.8563,-250.076 0/0:72:71,0:71:2603:0:0:0,-21.3731,-234.355 0/0:79:75,3:75:2672:3:96:0,-15.7396,-232.24 0/0:114:110,4:110:3932:4:139:0,-21.5694,-341.186 0/0:86:79,7:79:2809:7:238:0,-5.25348,-232.345 0/1:60:52,8:52:1888:8:266:-4.96356,0,-151.886 dDocent_Contig_12497 10 . A T 295.631 . AB=0.12;ABP=316.571;AC=2;AF=0.166667;AN=12;AO=48;CIGAR=1X;DP=676;DPB=676;DPRA=0;EPP=107.241;EPPR=1366.69;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8125;PAIREDR=0.820064;PAO=0;PQA=0;PQR=0;PRO=0;QA=1893;QR=25076;RO=628;RPL=0;RPP=107.241;RPPR=1366.69;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=628;SRP=1366.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:74:71,3:71:2818:3:105:0,-12.4826,-243.938 0/0:134:129,5:129:5164:5:196:0,-22.3258,-446.618 0/0:101:99,2:99:3989:2:75:0,-23.2852,-351.866 0/0:117:109,8:109:4320:8:324:0,-5.69132,-359.239 0/1:134:119,15:119:4772:15:601:-14.0904,0,-389.042 0/1:116:101,15:101:4013:15:592:-18.6945,0,-326.234 dDocent_Contig_12498 33 . G C 2611.95 . AB=0.0833333;ABP=93.4883;AC=0;AF=0;AN=12;AO=5;CIGAR=2X;DP=294;DPB=294;DPRA=0;EPP=13.8677;EPPR=409.076;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.73262;PAO=0;PQA=0;PQR=0;PRO=0;QA=194;QR=7287;RO=187;RPL=0;RPP=13.8677;RPPR=409.076;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=187;SRP=409.076;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:36:30,0,6:30:1171:0,6:0,223:-9.59018,-18.6211,-114.895,0,-96.6484,-94.8422 0|0:40:36,0,4:36:1382:0,4:0,146:-1.4557,-12.2928,-125.739,0,-113.813,-112.609 0|0:35:28,0,7:28:1088:0,7:0,268:-13.9393,-22.3682,-111.773,0,-89.7883,-87.6811 0|0:79:68,0,11:68:2659:0,11:0,430:-15.2703,-35.7403,-254.347,0,-218.998,-215.686 0|0:60:6,5,49:6:237:5,49:194,1920:-156.07,-141.938,-159.935,0,-3.56983,-4.75554 0|0:44:19,0,25:19:750:0,25:0,983:-75.5266,-81.2461,-142.959,0,-62.1062,-54.5804 dDocent_Contig_12499 123 . C T 292.085 . AB=0.5;ABP=3.0103;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=2X2M1X;DP=140;DPB=140;DPRA=0.147059;EPP=7.35324;EPPR=278.787;GTI=0;LEN=1;MEANALT=2;MQM=47.5;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=70;QR=4170;RO=127;RPL=0;RPP=7.35324;RPPR=278.787;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=278.787;SRR=127;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:46:46,0,0,0:46:1498:0,0,0:0,0,0:0,-13.8474,-135.109,-13.8474,-135.109,-135.109,-13.8474,-135.109,-135.109,-135.109 0|0:44:43,0,0,1:43:1426:0,0,1:0,0,30:0,-12.9443,-128.333,-12.9443,-128.333,-128.333,-10.2458,-125.935,-125.935,-125.634 0|0:9:9,0,0,0:9:292:0,0,0:0,0,0:0,-2.70927,-26.5976,-2.70927,-26.5976,-26.5976,-2.70927,-26.5976,-26.5976,-26.5976 0|0:31:29,2,0,0:29:954:2,0,0:69,0,0:0,-2.77927,-79.6123,-8.72987,-80.2144,-85.8211,-8.72987,-80.2144,-85.8211,-85.8211 1|0:4:0,0,2,2:0:0:0,2,2:0,70,68:-11.2792,-11.2792,-11.2792,-5.85587,-5.85587,-5.25381,-5.76072,-5.76072,0,-5.15866 0|0:6:0,6,0,0:0:0:6,0,0:209,0,0:-19.1511,-1.80618,0,-19.1511,-1.80618,-19.1511,-19.1511,-1.80618,-19.1511,-19.1511 dDocent_Contig_12500 22 . G A 152.33 . AB=0.222222;ABP=27.1378;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=121;DPB=121;DPRA=1.2;EPP=24.725;EPPR=244.044;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=398;QR=4434;RO=111;RPL=0;RPP=24.725;RPPR=244.044;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=111;SRP=244.044;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:788:0:0:0,-6.0206,-71.2358 0/0:30:28,2:28:1122:2:81:0,-1.34517,-93.579 0/1:12:8,4:8:317:4:154:-10.6211,0,-25.283 0/1:24:20,4:20:809:4:163:-7.83371,0,-65.9006 0/0:27:27,0:27:1073:0:0:0,-8.12781,-96.8589 0/0:8:8,0:8:325:0:0:0,-2.40824,-29.6196 dDocent_Contig_12501 52 . G A 1877.01 . AB=0.613208;ABP=14.81;AC=3;AF=0.25;AN=12;AO=66;CIGAR=1X;DP=207;DPB=207;DPRA=0.88;EPP=146.327;EPPR=309.188;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.863636;PAIREDR=0.978723;PAO=0;PQA=0;PQR=0;PRO=0;QA=2529;QR=5277;RO=141;RPL=66;RPP=146.327;RPPR=309.188;RPR=0;RUN=1;SAF=66;SAP=146.327;SAR=0;SRF=141;SRP=309.188;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:50,0:50:1849:0:0:0,-15.0515,-166.667 0/1:24:21,3:21:771:3:106:-2.66381,0,-62.4865 0/0:25:25,0:25:955:0:0:0,-7.52575,-86.2554 0/0:26:25,1:25:918:1:41:0,-3.73221,-78.8191 0/1:40:11,29:11:421:29:1137:-90.5719,0,-26.1943 0/1:42:9,33:9:363:33:1245:-99.6721,0,-20.391 dDocent_Contig_12502 36 . T G 136.143 . AB=0.139535;ABP=100.07;AC=3;AF=0.25;AN=12;AO=16;CIGAR=1X;DP=199;DPB=199;DPRA=1.60909;EPP=37.7539;EPPR=400.39;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0.748634;PAO=0;PQA=0;PQR=0;PRO=0;QA=646;QR=7323;RO=183;RPL=0;RPP=37.7539;RPPR=400.39;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=183;SRP=400.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:17,3:17:679:3:123:-5.44419,0,-55.4159 0/0:43:41,2:41:1632:2:81:0,-5.25856,-139.422 0/0:22:22,0:22:892:0:0:0,-6.62266,-80.5861 0/1:39:33,6:33:1298:6:238:-10.0516,0,-105.34 0/0:48:46,2:46:1855:2:81:0,-6.76371,-159.464 0/1:27:24,3:24:967:3:123:-3.33698,0,-79.201 dDocent_Contig_12503 65 . A G 907.084 . AB=0.276596;ABP=64.1349;AC=3;AF=0.25;AN=12;AO=44;CIGAR=1X;DP=329;DPB=329;DPRA=0.785156;EPP=90.0666;EPPR=621.88;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.977273;PAIREDR=0.996491;PAO=0;PQA=0;PQR=0;PRO=0;QA=1712;QR=11027;RO=285;RPL=44;RPP=98.5551;RPPR=621.88;RPR=0;RUN=1;SAF=43;SAP=90.0666;SAR=1;SRF=285;SRP=621.88;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:49:38,11:38:1419:11:421:-23.4916,0,-113.237 0/0:94:94,0:94:3593:0:0:0,-28.2968,-323.493 0/0:60:55,5:55:2175:5:186:0,-0.966442,-178.829 0/1:85:62,23:62:2443:23:906:-56.2582,0,-194.432 0/0:34:34,0:34:1320:0:0:0,-10.235,-119.063 0/1:7:2,5:2:77:5:199:-16.1802,0,-5.20162 dDocent_Contig_12505 12 . G C 77.3427 . AB=0.125;ABP=71.4117;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=603;DPB=603;DPRA=0.461224;EPP=26.8965;EPPR=1271.15;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.962329;PAO=0;PQA=0;PQR=0;PRO=0;QA=450;QR=23480;RO=584;RPL=0;RPP=26.8965;RPPR=1271.15;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=584;SRP=1271.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:57:52,4:52:2066:4:164:0,-2.07753,-170.979 0/0:78:78,0:78:3144:0:0:0,-23.4803,-283.023 0/1:56:49,7:49:1957:7:286:-9.25714,0,-159.46 0/0:63:60,0:60:2418:0:0:0,-18.0618,-217.361 0/0:200:199,0:199:8017:0:0:0,-59.905,-720.873 0/0:149:146,0:146:5878:0:0:0,-43.9504,-528.597 dDocent_Contig_12506 16 . G A 7640.27 . AB=0.669643;ABP=86.9998;AC=5;AF=0.416667;AN=12;AO=225;CIGAR=1X2M2D4M;DP=351;DPB=289;DPRA=4.48;EPP=491.592;EPPR=146.327;GTI=0;LEN=1;MEANALT=2.6;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8894;QR=2586;RO=66;RPL=0;RPP=491.592;RPPR=146.327;RPR=225;RUN=1;SAF=225;SAP=491.592;SAR=0;SRF=66;SRP=146.327;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:83:13,65,4,0:13:518:65,4,0:2574,163,0:-207.921,0,-23.0835,-198.386,-29.2013,-239.84,-211.834,-42.6505,-241.044,-254.492 1|0:82:9,58,15,0:9:359:58,15,0:2256,597,0:-202.251,-19.5898,-31.6967,-155.801,0,-180.853,-204.96,-49.1565,-185.369,-234.527 1|0:76:9,52,10,5:9:336:52,10,5:2078,388,197:-172.828,-4.37229,-16.2202,-143.668,0,-168.162,-159.332,-15.665,-154.966,-185.331 1|0:77:9,47,20,0:9:353:47,20,0:1866,761,0:-184.275,-33.3616,-48.247,-124.585,0,-147.594,-186.984,-62.3954,-153.615,-216.015 0|0:15:13,0,1,0:13:517:0,1,0:0,27,0:0,-3.91339,-46.6657,-1.69963,-44.544,-44.2429,-3.91339,-46.6657,-44.544,-46.6657 0|1:18:13,3,2,0:13:503:3,2,0:120,79,0:-5.97424,0,-40.4041,-3.38865,-34.8052,-44.0902,-9.88763,-41.3072,-44.6923,-51.1939 dDocent_Contig_12508 21 . A G 69.6095 . AB=0.107143;ABP=153.152;AC=3;AF=0.25;AN=12;AO=13;CIGAR=1X;DP=295;DPB=295;DPRA=0.946078;EPP=31.2394;EPPR=615.366;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.153846;PAIREDR=0.737589;PAO=0;PQA=0;PQR=0;PRO=0;QA=510;QR=10884;RO=282;RPL=0;RPP=31.2394;RPPR=615.366;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=282;SRP=615.366;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:81:80,1:80:3027:1:38:0,-20.5862,-268.771 0/1:32:27,5:27:1018:5:197:-8.47361,0,-82.2825 0/1:59:54,5:54:2102:5:197:-0.345423,0,-171.624 0/0:91:91,0:91:3565:0:0:0,-27.3937,-320.931 0/0:11:11,0:11:422:0:0:0,-3.31133,-38.3285 0/1:21:19,2:19:750:2:78:-1.08184,0,-61.5041 dDocent_Contig_12509 11 . T A 9299.86 . AB=0.608434;ABP=53.8698;AC=6;AF=0.5;AN=12;AO=303;CIGAR=1X;DP=498;DPB=498;DPRA=0;EPP=660.966;EPPR=426.447;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.726073;PAIREDR=0.702564;PAO=0;PQA=0;PQR=0;PRO=0;QA=12111;QR=7834;RO=195;RPL=0;RPP=660.966;RPPR=426.447;RPR=303;RUN=1;SAF=303;SAP=660.966;SAR=0;SRF=195;SRP=426.447;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:72:29,43:29:1181:43:1710:-132.448,0,-84.8888 0/1:94:35,59:35:1412:59:2323:-180.938,0,-99.0347 0/1:77:29,48:29:1167:48:1945:-152.062,0,-82.1263 0/1:86:27,59:27:1074:59:2373:-187.828,0,-71.0604 0/1:69:37,32:37:1477:32:1266:-93.4381,0,-112.404 0/1:100:38,62:38:1523:62:2494:-194.494,0,-107.207 dDocent_Contig_12510 17 . T C 1302.51 . AB=0.4;ABP=12.9991;AC=2;AF=0.166667;AN=12;AO=46;CIGAR=1X;DP=310;DPB=310;DPRA=1.17949;EPP=102.898;EPPR=576.279;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.973485;PAO=0;PQA=0;PQR=0;PRO=0;QA=1861;QR=10667;RO=264;RPL=0;RPP=102.898;RPPR=576.279;RPR=46;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=264;SRP=576.279;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:45:45,0:45:1807:0:0:0,-13.5463,-162.83 0/0:47:47,0:47:1895:0:0:0,-14.1484,-170.747 0/0:45:45,0:45:1821:0:0:0,-13.5463,-164.093 0/0:58:58,0:58:2350:0:0:0,-17.4597,-211.642 0/1:51:41,10:41:1657:10:401:-21.096,0,-133.999 0/1:64:28,36:28:1137:36:1460:-112.376,0,-83.3415 dDocent_Contig_12511 107 . N T 219.458 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=233;QR=0;RO=0;RPL=0;RPP=18.2106;RPPR=0;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:6:0,6:0:0:6:198:-18.145,-1.80618,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12512 26 . C T 214.023 . AB=0.357143;ABP=10.4553;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X;DP=171;DPB=171;DPRA=0.857143;EPP=50.7827;EPPR=326.56;GTI=0;LEN=1;MEANALT=1;MQM=27.2727;MQMR=59.8792;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.986577;PAO=0;PQA=0;PQR=0;PRO=0;QA=870;QR=5943;RO=149;RPL=0;RPP=50.7827;RPPR=326.56;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=149;SRP=326.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:13,1:13:517:1:41:0,-1.43563,-44.0485 0/1:24:12,12:12:487:12:473:-22.2536,0,-36.9567 0/0:52:46,6:46:1818:6:237:0,-1.14429,-149.313 0/1:18:15,3:15:591:3:119:-2.33833,0,-48.1068 0/0:61:61,0:61:2448:0:0:0,-18.3628,-220.452 0/0:2:2,0:2:82:0:0:0,-0.60206,-7.77968 dDocent_Contig_12513 19 . T C 5035.9 . AB=0.492683;ABP=3.10563;AC=10;AF=0.833333;AN=12;AO=132;CIGAR=1X2M;DP=237;DPB=237;DPRA=0;EPP=289.645;EPPR=94.2121;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.984848;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5263;QR=1634;RO=42;RPL=0;RPP=289.645;RPPR=94.2121;RPR=132;RUN=1;SAF=132;SAP=289.645;SAR=0;SRF=42;SRP=94.2121;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:30:10,3,5,12:10:386:3,5,12:122,203,491:-37.5114,-30.4587,-61.2454,-23.78,-45.4048,-53.9638,0,-21.6213,-14.9402,-28.0745 1|1:62:14,2,20,26:14:548:2,20,26:81,793,1051:-102.652,-100.187,-144.642,-41.6015,-79.977,-80.6358,-20.2134,-58.5905,0,-57.4435 1|1:20:2,3,8,7:2:67:3,8,7:122,318,282:-43.3772,-33.9149,-38.4294,-17.8441,-13.1899,-20.8496,-20.7346,-16.0816,0,-24.0427 1|1:50:6,2,20,22:6:236:2,20,22:81,781,878:-115.285,-110.412,-129.223,-52.9005,-65.6329,-66.2919,-44.7772,-57.5107,0,-57.5681 1|1:32:1,0,0,31:1:41:0,0,31:0,0,1217:-105.713,-106.014,-109.398,-106.014,-109.398,-109.398,-5.53839,-9.33193,-9.33193,0 0|1:43:9,0,0,34:9:356:0,0,34:0,0,1344:-108.273,-110.982,-140.28,-110.982,-140.28,-140.28,0,-29.6933,-29.6933,-19.4583 dDocent_Contig_12514 54 . A C 1047.66 . AB=0;ABP=0;AC=4;AF=0.333333;AN=12;AO=29;CIGAR=1X;DP=175;DPB=175;DPRA=0.39726;EPP=65.983;EPPR=320.045;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1148;QR=5747;RO=146;RPL=29;RPP=65.983;RPPR=320.045;RPR=0;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=146;SRP=320.045;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:946:0:0:0,-7.22472,-85.4377 0/0:45:45,0:45:1778:0:0:0,-13.5463,-160.244 0/0:53:53,0:53:2084:0:0:0,-15.9546,-187.743 0/0:24:24,0:24:939:0:0:0,-7.22472,-84.8027 1/1:19:0,19:0:0:19:761:-68.8084,-5.71957,0 1/1:10:0,10:0:0:10:387:-35.1797,-3.0103,0 dDocent_Contig_12516 7 . A T 99.0899 . AB=0.156863;ABP=55.1682;AC=3;AF=0.25;AN=12;AO=9;CIGAR=1X;DP=99;DPB=99;DPRA=1.33333;EPP=22.5536;EPPR=198.443;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.888889;PAIREDR=0.966667;PAO=0;PQA=0;PQR=0;PRO=0;QA=349;QR=3435;RO=90;RPL=0;RPP=22.5536;RPPR=198.443;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=90;SRP=198.443;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:20,2:20:765:2:78:-0.780813,0,-62.5555 0/1:17:15,2:15:572:2:78:-2.28596,0,-46.7038 0/0:14:14,0:14:542:0:0:0,-4.21442,-49.1258 0/0:21:20,1:20:760:1:37:0,-2.6238,-65.0302 0/1:12:8,4:8:306:4:156:-10.8049,0,-24.2885 0/0:13:13,0:13:490:0:0:0,-3.91339,-44.4451 dDocent_Contig_12517 18 . T C 141.313 . AB=0;ABP=0;AC=6;AF=0.5;AN=12;AO=2;CIGAR=2X2M1X;DP=129;DPB=129;DPRA=2.17021;EPP=7.35324;EPPR=254.901;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=80;QR=4570;RO=116;RPL=0;RPP=7.35324;RPPR=254.901;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=116;SRP=254.901;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:25:22,3,0:22:855:3,0:121,0:-3.75445,0,-69.7396,-10.3771,-70.6427,-80.6187 0|1:23:21,2,0:21:831:2,0:81,0:-0.762044,0,-68.1843,-7.08367,-68.7863,-75.4663 0|0:44:43,1,0:43:1706:1,0:41,0:0,-9.15075,-149.677,-12.9443,-149.978,-153.362 0|0:34:30,2,2:30:1178:2,2:80,80:0,-2.44074,-98.7118,-2.44074,-92.7232,-98.7118 1|1:1:0,1,0:0:0:1,0:41,0:-4.09457,-0.30103,0,-4.09457,-0.30103,-4.09457 1|1:2:0,2,0:0:0:2,0:79,0:-7.49763,-0.60206,0,-7.49763,-0.60206,-7.49763 dDocent_Contig_12518 23 . G A 2581.21 . AB=0.419355;ABP=13.5174;AC=8;AF=0.666666;AN=12;AO=88;CIGAR=1X3M;DP=196;DPB=196;DPRA=0;EPP=194.1;EPPR=228.843;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=0.0113636;PAIREDR=0.923077;PAO=0;PQA=0;PQR=0;PRO=0;QA=3476;QR=4053;RO=104;RPL=0;RPP=194.1;RPPR=228.843;RPR=88;RUN=1;SAF=88;SAP=194.1;SAR=0;SRF=104;SRP=228.843;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:31:23,0,8:23:890:0,8:0,316:-19.4746,-26.3983,-99.4895,0,-73.4838,-71.0755 0|1:49:23,0,26:23:904:0,26:0,1031:-78.3394,-85.2631,-159.615,0,-74.7466,-66.9198 0|1:35:20,0,15:20:790:0,15:0,593:-43.174,-49.1946,-114.202,0,-65.4023,-60.8869 0|1:49:38,1,9:38:1469:1,9:40,352:-17.4892,-25.6327,-145.968,0,-117.328,-117.915 1|1:22:0,2,20:0:0:2,20:75,785:-71.092,-64.9503,-64.3482,-6.51804,0,-0.497437 1|1:10:0,0,10:0:0:0,10:0,399:-36.2691,-36.2691,-36.2691,-3.0103,-3.0103,0 dDocent_Contig_12520 1 . N G 73.0928 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=77;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:77:-7.3082,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12521 130 . T C 217.895 . AB=0.37037;ABP=6.95112;AC=4;AF=0.4;AN=10;AO=12;CIGAR=1X;DP=76;DPB=76;DPRA=1.21154;EPP=29.068;EPPR=139.813;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=392;QR=2340;RO=63;RPL=0;RPP=29.068;RPPR=139.813;RPR=12;RUN=1;SAF=0;SAP=29.068;SAR=12;SRF=0;SRP=139.813;SRR=63;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:18:10,8:10:382:8:254:-17.7521,0,-29.3161 0/0:35:33,1:33:1217:1:34:0,-7.04605,-106.543 0/1:9:7,2:7:260:2:70:-3.93813,0,-21.0458 0/0:13:13,0:13:481:0:0:0,-3.91339,-43.6314 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 dDocent_Contig_12522 35 . A C 2393.4 . AB=0.208108;ABP=276.827;AC=4;AF=0.333333;AN=12;AO=77;CIGAR=1M2X10M;DP=370;DPB=319.538;DPRA=0;EPP=170.214;EPPR=459.02;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.649351;PAIREDR=0.714286;PAO=0;PQA=0;PQR=0;PRO=0;QA=2645;QR=7674;RO=210;RPL=0;RPP=170.214;RPPR=459.02;RPR=77;RUN=1;SAF=77;SAP=170.214;SAR=0;SRF=210;SRP=459.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:73:38,0,13,21:38:1363:0,13,21:0,452,719:-46.9231,-58.3622,-169.525,-21.6166,-132.782,-128.869,0,-111.163,-74.422,-104.841 0|1:66:40,0,6,20:40:1473:0,6,20:0,198,683:-43.3952,-55.4364,-175.893,-39.4317,-159.888,-158.082,0,-120.472,-104.47,-114.451 0|1:48:34,1,5,8:34:1224:1,5,8:40,167,280:-12.5498,-19.4857,-119.051,-9.27369,-105.836,-107.627,0,-96.5717,-86.3525,-97.4596 0|1:67:43,4,6,14:43:1518:4,6,14:156,208,477:-25.7433,-25.8566,-148.253,-21.7872,-132.556,-143.576,0,-110.759,-106.684,-119.37 0|0:43:24,0,15,4:24:925:0,15,4:0,536,140:-36.4759,-43.7006,-119.673,0,-75.9858,-71.4704,-32.3112,-108.284,-64.5999,-107.08 0|0:73:31,0,32,10:31:1171:0,32,10:0,1161,346:-85.4749,-94.8069,-190.791,0,-95.9998,-86.3668,-66.6925,-162.676,-67.8891,-159.665 dDocent_Contig_12524 98 . N T 340.092 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=11;CIGAR=1X;DP=11;DPB=11;DPRA=0;EPP=26.8965;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0.636364;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=358;QR=0;RO=0;RPL=11;RPP=26.8965;RPPR=0;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:27:-2.69978,-0.30103,0 1/1:3:0,3:0:0:3:99:-9.23746,-0.90309,0 1/1:6:0,6:0:0:6:207:-18.9682,-1.80618,0 1/1:1:0,1:0:0:1:25:-2.49986,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12526 33 . G A 61.1946 . AB=0.114286;ABP=93.4676;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=360;DPB=360;DPRA=1.25792;EPP=22.5536;EPPR=765.197;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.555556;PAIREDR=0.376068;PAO=0;PQA=0;PQR=0;PRO=0;QA=355;QR=13775;RO=351;RPL=0;RPP=22.5536;RPPR=765.197;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=351;SRP=765.197;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:54,0:54:2142:0:0:0,-16.2556,-192.965 0/0:62:62,0:62:2479:0:0:0,-18.6639,-223.256 0/0:31:31,0:31:1203:0:0:0,-9.33193,-108.542 0/0:74:74,0:74:2858:0:0:0,-22.2762,-257.346 0/1:70:62,8:62:2424:8:315:-7.64233,0,-197.251 0/0:69:68,1:68:2669:1:40:0,-16.7754,-236.345 dDocent_Contig_12527 1 . N G 112.807 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=121;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:121:-11.2802,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12528 26 . C T 1122.51 . AB=0.157895;ABP=447.248;AC=3;AF=0.25;AN=12;AO=69;CIGAR=1X;DP=782;DPB=782;DPRA=1.26667;EPP=152.842;EPPR=1549.1;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997191;PAO=0;PQA=0;PQR=0;PRO=0;QA=2758;QR=28449;RO=712;RPL=0;RPP=152.842;RPPR=1549.1;RPR=69;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=712;SRP=1549.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:97:97,0:97:3900:0:0:0,-29.1999,-350.977 0/1:122:89,32:89:3549:32:1275:-78.1831,0,-282.604 0/0:166:166,0:166:6679:0:0:0,-49.971,-600.8 0/0:82:82,0:82:3281:0:0:0,-24.6845,-295.338 0/1:148:134,14:134:5361:14:557:-5.91838,0,-437.77 0/1:167:144,23:144:5679:23:926:-33.3717,0,-460.644 dDocent_Contig_12530 18 . C T 129.751 . AB=0.155172;ABP=62.913;AC=3;AF=0.25;AN=12;AO=9;CIGAR=1X;DP=150;DPB=150;DPRA=0.630435;EPP=22.5536;EPPR=309.188;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.6525;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.659574;PAO=0;PQA=0;PQR=0;PRO=0;QA=366;QR=5664;RO=141;RPL=0;RPP=22.5536;RPPR=309.188;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=141;SRP=309.188;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:20,5:20:806:5:204:-11.2183,0,-65.332 0/1:24:22,2:22:887:2:81:-0.461014,0,-72.9117 0/1:9:7,2:7:285:2:81:-4.97646,0,-23.3149 0/0:24:24,0:24:957:0:0:0,-7.22472,-86.4302 0/0:36:36,0:36:1428:0:0:0,-10.8371,-128.772 0/0:32:32,0:32:1301:0:0:0,-9.63296,-114.645 dDocent_Contig_12531 23 . T A 162.115 . AB=0.285714;ABP=14.1779;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=307;DPB=307;DPRA=0.475962;EPP=26.8965;EPPR=578.157;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.949324;PAO=0;PQA=0;PQR=0;PRO=0;QA=385;QR=9988;RO=296;RPL=0;RPP=26.8965;RPPR=645.766;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=288;SRP=578.157;SRR=8;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:23,1:23:765:1:39:0,-3.32816,-65.2539 0/0:47:45,2:45:1533:2:59:0,-8.54671,-132.641 0/1:28:20,8:20:669:8:287:-17.7344,0,-52.085 0/0:54:54,0:54:1809:0:0:0,-16.2556,-163.071 0/0:81:81,0:81:2760:0:0:0,-24.3834,-248.616 0/0:73:73,0:73:2452:0:0:0,-21.9752,-220.916 dDocent_Contig_12532 19 . C T 525.056 . AB=0.189189;ABP=127.195;AC=4;AF=0.333333;AN=12;AO=33;CIGAR=1X;DP=266;DPB=266;DPRA=0.803774;EPP=74.6689;EPPR=508.963;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.636364;PAIREDR=0.785408;PAO=0;PQA=0;PQR=0;PRO=0;QA=1346;QR=9380;RO=233;RPL=0;RPP=74.6689;RPPR=508.963;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=233;SRP=508.963;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:27,5:27:1082:5:204:-9.11107,0,-88.0341 0/0:53:53,0:53:2133:0:0:0,-15.9546,-192.142 0/1:37:31,6:31:1239:6:245:-11.2914,0,-100.638 0/0:65:60,5:60:2429:5:204:0,-0.822917,-200 0/1:41:36,5:36:1453:5:205:-6.49278,0,-118.674 0/1:38:26,12:26:1044:12:488:-32.8321,0,-82.8093 dDocent_Contig_12533 107 . N A 64.5902 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=68;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:68:-6.45793,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12534 62 . G A 136.665 . AB=0.152778;ABP=78.4086;AC=3;AF=0.25;AN=12;AO=11;CIGAR=1X;DP=136;DPB=136;DPRA=1.125;EPP=26.8965;EPPR=274.444;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.909091;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=438;QR=4863;RO=125;RPL=11;RPP=26.8965;RPPR=274.444;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=125;SRP=274.444;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:6:6,0:6:239:0:0:0,-1.80618,-21.8845 0/0:18:18,0:18:686:0:0:0,-5.41854,-62.0665 0/1:54:48,6:48:1862:6:243:-5.99235,0,-151.551 0/0:40:40,0:40:1557:0:0:0,-12.0412,-140.374 0/1:3:1,2:1:41:2:76:-6.31158,0,-3.19148 0/1:15:12,3:12:478:3:119:-6.57973,0,-38.8557 dDocent_Contig_12535 18 . G A 590.451 . AB=0.267327;ABP=50.5032;AC=4;AF=0.333333;AN=12;AO=29;CIGAR=1X;DP=144;DPB=144;DPRA=3;EPP=65.983;EPPR=248.387;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1142;QR=4476;RO=113;RPL=0;RPP=65.983;RPPR=248.387;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=113;SRP=248.387;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:12,3:12:474:3:122:-6.44841,0,-38.0779 0/1:30:18,12:18:720:12:465:-33.1632,0,-56.0942 0/0:34:32,2:32:1254:2:82:0,-2.45534,-105.346 0/1:43:34,8:34:1350:8:317:-15.8528,0,-108.719 0/0:9:9,0:9:360:0:0:0,-2.70927,-32.7612 0/1:12:8,4:8:318:4:156:-10.8026,0,-25.3715 dDocent_Contig_12536 16 . A G 73.9958 . AB=0.153846;ABP=43.6001;AC=2;AF=0.2;AN=10;AO=7;CIGAR=1X;DP=70;DPB=70;DPRA=2.66667;EPP=18.2106;EPPR=139.813;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.984127;PAO=0;PQA=0;PQR=0;PRO=0;QA=263;QR=2522;RO=63;RPL=0;RPP=18.2106;RPPR=139.813;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=63;SRP=139.813;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:489:0:0:0,-3.61236,-44.3613 0/1:21:19,2:19:766:2:73:-0.607556,0,-62.9396 0/1:18:14,4:14:567:4:156:-8.9979,0,-45.9539 0/0:17:16,1:16:619:1:34:0,-1.7186,-52.639 ./.:.:.:.:.:.:.:. 0/0:2:2,0:2:81:0:0:0,-0.60206,-7.68573 dDocent_Contig_12537 73 . C A 145.857 . AB=0.75;ABP=7.35324;AC=1;AF=0.1;AN=10;AO=6;CIGAR=1X;DP=98;DPB=98;DPRA=0.355556;EPP=16.0391;EPPR=202.786;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=203;QR=3560;RO=92;RPL=6;RPP=16.0391;RPPR=202.786;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=92;SRP=202.786;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 0/0:38:38,0:38:1444:0:0:0,-11.4391,-130.224 0/0:23:23,0:23:906:0:0:0,-6.92369,-81.8472 0/0:20:20,0:20:789:0:0:0,-6.0206,-71.3302 0/1:8:2,6:2:71:6:203:-16.1873,0,-4.33284 0/0:9:9,0:9:350:0:0:0,-2.70927,-31.8603 dDocent_Contig_12538 72 . G C 3119.54 . AB=0.575916;ABP=12.5716;AC=4;AF=0.4;AN=10;AO=110;CIGAR=1X;DP=193;DPB=193;DPRA=23.875;EPP=241.872;EPPR=183.243;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4173;QR=3161;RO=83;RPL=110;RPP=241.872;RPPR=183.243;RPR=0;RUN=1;SAF=110;SAP=241.872;SAR=0;SRF=83;SRP=183.243;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:65:36,29:36:1359:29:1134:-82.7886,0,-103.013 0/1:42:17,25:17:648:25:927:-71.0852,0,-46.0087 0/1:64:15,49:15:590:49:1849:-147.374,0,-34.1738 0/1:20:13,7:13:495:7:263:-18.0063,0,-38.874 ./.:.:.:.:.:.:.:. 0/0:2:2,0:2:69:0:0:0,-0.60206,-6.55057 dDocent_Contig_12540 41 . A G 11914.1 . AB=0.27451;ABP=70.5814;AC=8;AF=0.666667;AN=12;AO=348;CIGAR=1X3M;DP=461;DPB=461;DPRA=0;EPP=758.683;EPPR=235.358;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13819;QR=4192;RO=107;RPL=0;RPP=758.683;RPPR=235.358;RPR=348;RUN=1;SAF=348;SAP=758.683;SAR=0;SRF=107;SRP=235.358;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:42:27,3,12:27:1069:3,12:98,477:-31.1987,-31.4278,-118.508,0,-80.1409,-84.4344 0|1:27:19,1,7:19:741:1,7:34,285:-17.8494,-20.8193,-81.4111,0,-58.197,-58.8453 0|1:31:26,0,5:26:1027:0,5:0,205:-9.50308,-17.3299,-101.826,0,-84.9029,-83.3978 0|1:53:35,0,18:35:1355:0,18:0,735:-50.5182,-61.0543,-172.339,0,-111.685,-106.267 1|1:228:0,0,227:0:0:0,227:0,9006:-809.682,-809.682,-809.682,-68.3338,-68.3338,0 1|1:80:0,0,79:0:0:0,79:0,3111:-279.884,-279.884,-279.884,-23.7814,-23.7814,0 dDocent_Contig_12541 15 . A G 205.291 . AB=0.158537;ABP=86.0559;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=201;DPB=201;DPRA=0.886486;EPP=39.9253;EPPR=402.561;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.705882;PAIREDR=0.684783;PAO=0;PQA=0;PQR=0;PRO=0;QA=663;QR=7330;RO=184;RPL=0;RPP=39.9253;RPPR=402.561;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=184;SRP=402.561;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:42,2:42:1696:2:82:0,-5.46564,-145.08 0/1:47:43,4:43:1728:4:163:-0.910018,0,-141.59 0/1:35:26,9:26:1005:9:358:-22.0461,0,-80.2001 0/0:37:37,0:37:1456:0:0:0,-11.1381,-131.285 0/0:16:15,1:15:601:1:33:0,-1.51734,-51.13 0/0:22:21,1:21:844:1:27:0,-3.92288,-73.5735 dDocent_Contig_12542 11 . A G 307.677 . AB=0.17757;ABP=99.6307;AC=2;AF=0.166667;AN=12;AO=28;CIGAR=1X;DP=317;DPB=317;DPRA=5.37037;EPP=63.8115;EPPR=630.566;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1046;QR=11502;RO=289;RPL=0;RPP=63.8115;RPPR=630.566;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=289;SRP=630.566;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:1:1,0:1:41:0:0:0,-0.30103,-4.09457 0/0:26:26,0:26:1028:0:0:0,-7.82678,-92.8135 0/1:9:4,5:4:162:5:180:-13.8325,0,-12.2577 0/0:23:22,1:22:875:1:19:0,-5.02372,-77.1601 0/0:160:152,8:152:6073:8:299:0,-20.9109,-519.09 0/1:98:84,14:84:3323:14:548:-20.1567,0,-269.624 dDocent_Contig_12543 169 . G T 35.1407 . AB=0.178571;ABP=28.1373;AC=3;AF=0.25;AN=12;AO=6;CIGAR=2X;DP=71;DPB=71;DPRA=1.86667;EPP=16.0391;EPPR=141.985;GTI=0;LEN=1;MEANALT=1;MQM=51.6667;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.953125;PAO=0;PQA=0;PQR=0;PRO=0;QA=231;QR=2540;RO=64;RPL=6;RPP=16.0391;RPPR=141.985;RPR=0;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=141.985;SRR=64;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:15:13,2:13:518:2:71:-2.22398,0,-42.4509 0|0:28:27,1:27:1070:1:38:0,-4.63157,-92.797 0|1:11:9,2:9:359:2:82:-4.46835,0,-29.3616 0|0:14:13,0:13:514:0:0:0,-3.91339,-46.1971 0|0:1:1,0:1:39:0:0:0,-0.30103,-3.89656 0|1:2:1,1:1:40:1:40:-0.397549,0,-3.39362 dDocent_Contig_12545 27 . A C 1150.42 . AB=0.169811;ABP=203.769;AC=3;AF=0.25;AN=12;AO=36;CIGAR=3M1X1M;DP=307;DPB=284.2;DPRA=1.06;EPP=81.1833;EPPR=504.62;GTI=0;LEN=1;MEANALT=2.25;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.95671;PAO=0;PQA=0;PQR=0;PRO=0;QA=1447;QR=9160;RO=231;RPL=0;RPP=81.1833;RPPR=504.62;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=231;SRP=504.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:47:22,10,14:22:870:10,14:369,569:-40.3277,-16.7953,-85.3763,0,-41.4515,-67.3988 0|1:69:56,5,8:56:2243:5,8:187,318:-9.3368,-10.9923,-194.276,0,-169.602,-182.404 0|1:52:41,0,10:41:1618:0,10:0,402:-20.7961,-33.1383,-166.257,0,-133.128,-130.118 0|0:44:24,16,4:24:962:16,4:614,158:-43.0527,0,-74.4471,-37.2743,-66.2637,-115.339 0|0:50:50,0,0:50:1982:0,0:0,0:0,-15.0515,-178.586,-15.0515,-178.586,-178.586 0|0:45:38,7,0:38:1485:7,0:266,0:-10.7502,0,-120.356,-22.1893,-122.463,-144.271 dDocent_Contig_12546 66 . T C 364.053 . AB=0.777778;ABP=15.074;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=146;DPB=146;DPRA=0.754717;EPP=37.7539;EPPR=285.302;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992308;PAO=0;PQA=0;PQR=0;PRO=0;QA=540;QR=4356;RO=130;RPL=16;RPP=37.7539;RPPR=285.302;RPR=0;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=130;SRP=285.302;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1167:0:0:0,-10.536,-105.329 0/0:22:20,2:20:703:2:62:0,-0.733809,-57.6986 0/1:18:4,14:4:129:14:478:-37.9281,0,-6.5107 0/0:16:16,0:16:516:0:0:0,-4.81648,-46.7444 0/0:30:30,0:30:990:0:0:0,-9.0309,-89.4002 0/0:25:25,0:25:851:0:0:0,-7.52575,-76.8946 dDocent_Contig_12547 38 . C T 45.3916 . AB=0.117647;ABP=67.7713;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=188;DPB=188;DPRA=0.744526;EPP=16.0391;EPPR=396.047;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.966851;PAO=0;PQA=0;PQR=0;PRO=0;QA=244;QR=7217;RO=181;RPL=0;RPP=16.0391;RPPR=396.047;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=181;SRP=396.047;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:47,0:47:1848:0:0:0,-14.1484,-166.129 0/1:18:15,3:15:596:3:123:-6.04625,0,-48.5594 0/0:60:60,0:60:2415:0:0:0,-18.0618,-217.489 0/1:33:30,3:30:1204:3:121:-1.34621,0,-98.6989 0/0:11:11,0:11:434:0:0:0,-3.31133,-39.41 0/0:18:18,0:18:720:0:0:0,-5.41854,-65.1259 dDocent_Contig_12549 18 . T A 2388.19 . AB=0.706422;ABP=43.3519;AC=3;AF=0.25;AN=12;AO=78;CIGAR=1X;DP=202;DPB=202;DPRA=2.025;EPP=172.385;EPPR=272.273;GTI=0;LEN=1;MEANALT=1;MQM=59.9103;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.974359;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3096;QR=4862;RO=124;RPL=0;RPP=172.385;RPPR=272.273;RPR=78;RUN=1;SAF=78;SAP=172.385;SAR=0;SRF=124;SRP=272.273;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:283:0:0:0,-2.10721,-25.8434 0/1:46:13,33:13:520:33:1292:-102.703,0,-33.3001 0/1:10:1,9:1:40:9:363:-30.024,0,-0.985379 0/1:53:18,35:18:711:35:1400:-110.292,0,-48.3618 0/0:33:33,0:33:1287:0:0:0,-9.93399,-116.09 0/0:53:52,1:52:2021:1:41:0,-11.86,-177.986 dDocent_Contig_12550 71 . T C 258.082 . AB=0.270833;ABP=24.906;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=196;DPB=196;DPRA=1.18966;EPP=37.7539;EPPR=393.875;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994444;PAO=0;PQA=0;PQR=0;PRO=0;QA=585;QR=7095;RO=180;RPL=16;RPP=37.7539;RPPR=393.875;RPR=0;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=180;SRP=393.875;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:50,0:50:1958:0:0:0,-15.0515,-176.413 0/1:44:32,12:32:1254:12:435:-26.2269,0,-99.8879 0/0:30:28,2:28:1087:2:82:0,-1.25122,-90.3331 0/0:60:59,1:59:2348:1:28:0,-15.2621,-208.681 0/0:8:8,0:8:326:0:0:0,-2.40824,-29.7099 0/1:4:3,1:3:122:1:40:-2.79156,0,-10.1684 dDocent_Contig_12552 146 . C A 362.706 . AB=0.178571;ABP=103.518;AC=1;AF=0.1;AN=10;AO=20;CIGAR=1X;DP=203;DPB=203;DPRA=4.92308;EPP=46.4397;EPPR=400.39;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=792;QR=7271;RO=183;RPL=0;RPP=46.4397;RPPR=400.39;RPR=20;RUN=1;SAF=0;SAP=46.4397;SAR=20;SRF=0;SRP=400.39;SRR=183;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:689:0:0:0,-5.11751,-62.3391 0/0:27:27,0:27:1077:0:0:0,-8.12781,-97.2203 0/1:112:92,20:92:3650:20:792:-37.8727,0,-294.828 0/0:42:42,0:42:1652:0:0:0,-12.6433,-148.917 ./.:.:.:.:.:.:.:. 0/0:5:5,0:5:203:0:0:0,-1.50515,-18.6531 dDocent_Contig_12553 19 . T A 2538.01 . AB=0.315625;ABP=97.4965;AC=6;AF=0.5;AN=12;AO=101;CIGAR=1X;DP=320;DPB=320;DPRA=0;EPP=222.329;EPPR=478.563;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.954338;PAO=0;PQA=0;PQR=0;PRO=0;QA=3993;QR=8608;RO=219;RPL=0;RPP=222.329;RPPR=478.563;RPR=101;RUN=1;SAF=101;SAP=222.329;SAR=0;SRF=219;SRP=478.563;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:33,21:33:1280:21:832:-58.939,0,-99.2223 0/1:60:32,28:32:1248:28:1092:-80.5061,0,-94.5303 0/1:46:40,6:40:1559:6:235:-7.67144,0,-126.708 0/1:55:27,28:27:1074:28:1112:-83.8089,0,-80.3941 0/1:53:45,8:45:1796:8:325:-13.6648,0,-145.903 0/1:52:42,10:42:1651:10:397:-20.4323,0,-133.174 dDocent_Contig_12556 17 . A G 64.2895 . AB=0.166667;ABP=26.1727;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=253;DPB=253;DPRA=0.826816;EPP=20.3821;EPPR=535.021;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=309;QR=9750;RO=245;RPL=0;RPP=20.3821;RPPR=535.021;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=245;SRP=535.021;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:20,4:20:793:4:161:-7.65076,0,-64.4621 0/0:50:46,4:46:1832:4:148:0,-1.37337,-151.415 0/0:79:79,0:79:3146:0:0:0,-23.7814,-283.209 0/0:57:57,0:57:2270:0:0:0,-17.1587,-204.468 0/0:13:13,0:13:513:0:0:0,-3.91339,-46.5121 0/0:30:30,0:30:1196:0:0:0,-9.0309,-107.914 dDocent_Contig_12557 98 . N A 67.4314 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=2X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=71;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:71:-6.74206,-0.60206,0 dDocent_Contig_12559 25 . G A 186.483 . AB=0.2;ABP=46.0055;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=159;DPB=159;DPRA=1.09211;EPP=29.068;EPPR=322.217;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.666667;PAIREDR=0.517007;PAO=0;PQA=0;PQR=0;PRO=0;QA=457;QR=5899;RO=147;RPL=0;RPP=29.068;RPPR=322.217;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=147;SRP=322.217;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:31,0:31:1243:0:0:0,-9.33193,-112.14 0/0:34:34,0:34:1342:0:0:0,-10.235,-121.038 0/0:28:27,1:27:1098:1:38:0,-4.63157,-95.3055 0/1:49:41,8:41:1647:8:308:-13.3268,0,-133.701 0/0:11:11,0:11:446:0:0:0,-3.31133,-40.4962 0/1:6:3,3:3:123:3:111:-8.54336,0,-9.65861 dDocent_Contig_12560 66 . A G 556.04 . AB=0.152174;ABP=293.043;AC=3;AF=0.25;AN=12;AO=51;CIGAR=1X;DP=564;DPB=564;DPRA=1.06667;EPP=113.755;EPPR=1114.8;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.803922;PAIREDR=0.957031;PAO=0;PQA=0;PQR=0;PRO=0;QA=1945;QR=19132;RO=512;RPL=51;RPP=113.755;RPPR=1114.8;RPR=0;RUN=1;SAF=51;SAP=113.755;SAR=0;SRF=512;SRP=1114.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:96:74,21:74:2703:21:768:-40.4135,0,-214.445 0/0:108:99,9:99:3761:9:356:0,-0.112741,-306.179 0/1:58:51,7:51:1917:7:273:-7.47549,0,-155.304 0/1:122:108,14:108:4027:14:548:-12.9363,0,-325.792 0/0:90:90,0:90:3306:0:0:0,-27.0927,-297.673 0/0:90:90,0:90:3418:0:0:0,-27.0927,-307.735 dDocent_Contig_12561 12 . G A 51.3047 . AB=0.122807;ABP=73.4498;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=125;DPB=125;DPRA=1.77778;EPP=20.3821;EPPR=163.532;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=57.6752;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0;PAIREDR=0.487179;PAO=0;PQA=0;PQR=0;PRO=0;QA=313;QR=4505;RO=117;RPL=0;RPP=20.3821;RPPR=257.073;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=105;SRP=163.532;SRR=12;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:30,4:30:1123:4:158:-4.36525,0,-91.0574 0/0:23:22,1:22:875:1:38:0,-3.12642,-75.2566 0/0:13:13,0:13:499:0:0:0,-3.91339,-45.0727 0/1:23:20,3:20:793:3:117:-3.98601,0,-64.6161 0/0:20:20,0:20:762:0:0:0,-6.0206,-68.7801 0/0:12:12,0:12:453:0:0:0,-3.61236,-40.8305 dDocent_Contig_12562 12 . C T 322.487 . AB=0.188889;ABP=78.674;AC=2;AF=0.166667;AN=12;AO=21;CIGAR=1X;DP=227;DPB=227;DPRA=1.77391;EPP=48.6112;EPPR=450.334;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.714286;PAIREDR=0.830097;PAO=0;PQA=0;PQR=0;PRO=0;QA=846;QR=8187;RO=206;RPL=0;RPP=48.6112;RPPR=450.334;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=206;SRP=450.334;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:27:20,7:20:800:7:282:-17.6254,0,-64.1911 0/1:63:53,10:53:2125:10:405:-17.8452,0,-172.467 0/0:26:25,1:25:979:1:39:0,-3.93022,-84.513 0/0:48:47,1:47:1878:1:41:0,-10.3549,-165.134 0/0:23:23,0:23:880:0:0:0,-6.92369,-79.4989 0/0:40:38,2:38:1525:2:79:0,-4.54396,-129.997 dDocent_Contig_12563 25 . C T 117.549 . AB=0.111111;ABP=26.6552;AC=3;AF=0.3;AN=10;AO=8;CIGAR=1X1M1X;DP=156;DPB=156;DPRA=0.5625;EPP=20.3821;EPPR=324.388;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.993243;PAO=0;PQA=0;PQR=0;PRO=0;QA=317;QR=5869;RO=148;RPL=0;RPP=20.3821;RPPR=324.388;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=148;SRP=324.388;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:29:27,2:27:1083:2:78:0,-1.32657,-90.3552 0|0:58:57,1:57:2249:1:40:0,-13.4641,-198.584 0|1:18:16,2:16:631:2:78:-1.98424,0,-51.7047 0|0:48:48,0:48:1906:0:0:0,-14.4494,-171.749 .:.:.:.:.:.:.:. 1|1:3:0,3:0:0:3:121:-11.2802,-0.90309,0 dDocent_Contig_12564 23 . C G 892.969 . AB=0.369565;ABP=16.6056;AC=4;AF=0.333333;AN=12;AO=34;CIGAR=1X;DP=139;DPB=139;DPRA=0.978723;EPP=76.8404;EPPR=231.015;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.911765;PAIREDR=0.790476;PAO=0;PQA=0;PQR=0;PRO=0;QA=1364;QR=4216;RO=105;RPL=0;RPP=76.8404;RPPR=231.015;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=105;SRP=231.015;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:15,9:15:599:9:357:-25.2639,0,-47.0219 0/1:16:13,3:13:524:3:123:-6.64831,0,-42.6894 0/0:19:19,0:19:770:0:0:0,-5.71957,-69.6197 0/0:28:28,0:28:1120:0:0:0,-8.42884,-101.079 0/1:21:5,16:5:199:16:649:-52.4212,0,-11.9663 0/1:31:25,6:25:1004:6:235:-12.1854,0,-81.3233 dDocent_Contig_12565 74 . C T 1298.61 . AB=0.351351;ABP=31.4155;AC=2;AF=0.166667;AN=12;AO=58;CIGAR=1X;DP=380;DPB=380;DPRA=1.23396;EPP=128.956;EPPR=702.224;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.689655;PAIREDR=0.459627;PAO=0;PQA=0;PQR=0;PRO=0;QA=2205;QR=11908;RO=322;RPL=27;RPP=3.60933;RPPR=22.6749;RPR=31;RUN=1;SAF=27;SAP=3.60933;SAR=31;SRF=188;SRP=22.6749;SRR=134;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:61:59,2:59:2171:2:75:0,-11.244,-188.479 0/0:67:65,2:65:2361:2:82:0,-12.3893,-204.93 0/0:51:49,2:49:1871:2:81:0,-7.6668,-160.933 0/0:53:53,0:53:1945:0:0:0,-15.9546,-175.289 0/1:69:37,32:37:1365:32:1228:-90.0328,0,-102.358 0/1:79:59,20:59:2195:20:739:-43.0501,0,-173.989 dDocent_Contig_12566 52 . C T 1219.16 . AB=0.185714;ABP=63.067;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X2M7I2M;DP=275;DPB=354.8;DPRA=0.589888;EPP=31.2394;EPPR=469.877;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=501;QR=8502;RO=215;RPL=13;RPP=31.2394;RPPR=469.877;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=215;SRP=469.877;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:27:21,0,6:21:834:0,6:0,221:-12.1182,-18.4398,-87.1211,0,-69.0557,-67.2495 0|0:4:0,0,4:0:0:0,4:0,133:-12.2975,-12.2975,-12.2975,-1.20412,-1.20412,0 0|0:52:24,9,18:24:951:9,18:352,696:-49.9561,-28.2332,-103.815,0,-49.3588,-72.8833 1|0:18:0,4,14:0:0:4,14:149,494:-52.7663,-40.5653,-39.3612,-12.5688,0,-8.35442 0|0:72:70,0,1:70:2762:0,1:0,35:0,-21.0721,-248.357,-18.2343,-245.51,-245.209 0|0:102:100,0,0:100:3955:0,0:0,0:0,-30.103,-355.567,-30.103,-355.567,-355.567 dDocent_Contig_12568 39 . C T 195.429 . AB=0.210526;ABP=44.4969;AC=4;AF=0.4;AN=10;AO=12;CIGAR=1X;DP=65;DPB=65;DPRA=1.78125;EPP=29.068;EPPR=118.098;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=471;QR=2137;RO=53;RPL=0;RPP=29.068;RPPR=118.098;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=53;SRP=118.098;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:13:9,4:9:361:4:162:-11.0536,0,-28.9401 0/0:8:8,0:8:328:0:0:0,-2.40824,-29.8903 ./.:.:.:.:.:.:.:. 0/1:7:6,1:6:238:1:41:-1.98736,0,-19.6866 0/1:21:17,4:17:683:4:161:-8.55327,0,-55.4771 0/1:16:13,3:13:527:3:107:-5.15992,0,-42.9603 dDocent_Contig_12569 44 . T C 22749.1 . AB=0.0733333;ABP=240.193;AC=0;AF=0;AN=12;AO=11;CIGAR=16M1X4M1X16M;DP=975;DPB=938.026;DPRA=0;EPP=26.8965;EPPR=213.643;GTI=0;LEN=1;MEANALT=8;MQM=60;MQMR=60;NS=6;NUMALT=7;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=392;QR=3773;RO=97;RPL=0;RPP=26.8965;RPPR=213.643;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=97;SRP=213.643;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:80:0,0,21,11,0,0,0,48:0:0:0,21,11,0,0,0,48:0,785,402,0,0,0,1918:-222.267,-222.267,-222.267,-158.004,-158.004,-151.683,-189.432,-189.432,-125.172,-186.121,-222.267,-222.267,-158.004,-189.432,-222.267,-222.267,-222.267,-158.004,-189.432,-222.267,-222.267,-222.267,-222.267,-158.004,-189.432,-222.267,-222.267,-222.267,-64.2734,-64.2734,0,-31.4377,-64.2734,-64.2734,-64.2734,-49.8239 0|0:189:42,0,30,0,11,0,0,101:42:1638:0,30,0,11,0,0,101:0,1058,0,388,0,0,4000:-316.609,-329.252,-463.891,-243.139,-377.777,-368.746,-329.252,-463.891,-377.777,-463.891,-297.675,-432.314,-346.201,-432.314,-429.003,-329.252,-463.891,-377.777,-463.891,-432.314,-463.891,-329.252,-463.891,-377.777,-463.891,-432.314,-463.891,-463.891,0,-134.664,-48.5485,-134.664,-103.086,-134.664,-134.664,-104.26 0|0:150:12,11,8,0,3,0,0,112:12:465:11,8,0,3,0,0,112:392,277,0,104,0,0,4423:-360.356,-332.036,-366.925,-341.464,-347.731,-377.256,-363.969,-370.236,-379.664,-402.169,-355.52,-361.787,-371.215,-393.72,-392.817,-363.969,-370.236,-379.664,-402.169,-393.72,-402.169,-363.969,-370.236,-379.664,-402.169,-393.72,-402.169,-402.169,0,-6.27985,-15.7114,-38.2179,-29.7683,-38.2179,-38.2179,-4.50255 0|0:177:32,0,0,9,0,0,0,129:32:1249:0,0,9,0,0,0,129:0,0,342,0,0,0,5104:-410.466,-420.099,-522.769,-420.099,-522.769,-522.769,-392.056,-494.727,-494.727,-492.018,-420.099,-522.769,-522.769,-494.727,-522.769,-420.099,-522.769,-522.769,-494.727,-522.769,-522.769,-420.099,-522.769,-522.769,-494.727,-522.769,-522.769,-522.769,0,-102.721,-102.721,-74.6748,-102.721,-102.721,-102.721,-63.8882 0|0:158:0,0,0,103,0,14,14,21:0:0:0,0,103,0,14,14,21:0,0,3914,0,460,553,817:-388.087,-388.087,-388.087,-388.087,-388.087,-388.087,-67.1523,-67.1523,-67.1523,-36.1462,-388.087,-388.087,-388.087,-67.1523,-388.087,-350.926,-350.926,-350.926,-29.9986,-350.926,-346.712,-342.587,-342.587,-342.587,-21.6433,-342.587,-305.427,-338.373,-320.949,-320.949,-320.949,0,-320.949,-283.789,-275.449,-314.627 0|0:221:11,0,0,140,0,0,0,57:11:421:0,0,140,0,0,0,57:0,0,5352,0,0,0,2272:-588.344,-591.656,-626.202,-591.656,-626.202,-626.202,-152.576,-187.121,-187.121,-144.977,-591.656,-626.202,-626.202,-187.121,-626.202,-591.656,-626.202,-626.202,-187.121,-626.202,-626.202,-591.656,-626.202,-626.202,-187.121,-626.202,-626.202,-626.202,-404.554,-439.101,-439.101,0,-439.101,-439.101,-439.101,-421.942 dDocent_Contig_12571 22 . T A 268.309 . AB=0.132597;ABP=215.227;AC=2;AF=0.166667;AN=12;AO=51;CIGAR=1X;DP=1074;DPB=1074;DPRA=0;EPP=113.755;EPPR=2224.43;GTI=0;LEN=1;MEANALT=1;MQM=51.0196;MQMR=59.7937;NS=6;NUMALT=1;ODDS=0;PAIRED=0.352941;PAIREDR=0.867058;PAO=0;PQA=0;PQR=0;PRO=0;QA=2029;QR=40679;RO=1023;RPL=0;RPP=113.755;RPPR=2224.43;RPR=51;RUN=1;SAF=51;SAP=113.755;SAR=0;SRF=1023;SRP=2224.43;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:81:72,9:72:2822:9:358:-6.7211,0,-229.625 0/1:100:85,15:85:3404:15:595:-23.3317,0,-276.11 0/0:66:64,2:64:2574:2:80:0,-12.6074,-223.991 0/0:160:150,10:150:5991:10:397:0,-13.7306,-504.43 0/0:345:332,13:332:13151:13:517:0,-57.3055,-1136.09 0/0:322:320,2:320:12737:2:82:0,-89.4328,-1137.89 dDocent_Contig_12572 51 . T C 1543.61 . AB=0.309353;ABP=46.8928;AC=6;AF=0.5;AN=12;AO=43;CIGAR=1X1M;DP=203;DPB=203;DPRA=0.914474;EPP=96.3836;EPPR=261.416;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.790698;PAIREDR=0.596639;PAO=0;PQA=0;PQR=0;PRO=0;QA=1531;QR=4309;RO=119;RPL=21;RPP=3.0608;RPPR=5.21827;RPR=22;RUN=1;SAF=21;SAP=3.0608;SAR=22;SRF=54;SRP=5.21827;SRR=65;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:26:18,8,0:18:592:8,0:289,0:-18.5251,0,-45.7568,-23.9436,-48.165,-71.7576 0|1:28:21,5,2:21:775:5,2:174,80:-7.79039,0,-61.8488,-7.50729,-56.7613,-70.3041 0|0:38:36,2,0:36:1323:2,0:55,0:0,-6.21548,-114.136,-10.8371,-114.738,-119.08 0|1:42:22,14,6:22:807:14,6:515,203:-35.4987,0,-61.7633,-25.6789,-49.5325,-89.8275 1|1:35:3,5,27:3:105:5,27:186,952:-83.2822,-68.9599,-75.9977,-6.70102,0,-7.10822 0|1:34:19,7,8:19:707:7,8:267,296:-18.4857,-2.29923,-58.0568,0,-35.9532,-55.4483 dDocent_Contig_12573 13 . A G 31.6618 . AB=0.109375;ABP=87.8334;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=191;DPB=191;DPRA=2.65854;EPP=20.3821;EPPR=400.39;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0;PAIREDR=0.928962;PAO=0;PQA=0;PQR=0;PRO=0;QA=300;QR=7220;RO=183;RPL=0;RPP=20.3821;RPPR=400.39;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=183;SRP=400.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:64:57,7:57:2257:7:259:-4.38764,0,-184.035 0/0:45:44,1:44:1719:1:41:0,-9.45178,-150.839 0/0:28:28,0:28:1100:0:0:0,-8.42884,-99.2832 0/0:3:3,0:3:122:0:0:0,-0.90309,-11.3725 0/0:30:30,0:30:1190:0:0:0,-9.0309,-107.375 0/0:21:21,0:21:832:0:0:0,-6.32163,-75.1906 dDocent_Contig_12574 24 . T A 388.381 . AB=0.18254;ABP=113.307;AC=5;AF=0.416667;AN=12;AO=24;CIGAR=1X;DP=160;DPB=160;DPRA=0;EPP=55.1256;EPPR=298.331;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=0.779412;PAO=0;PQA=0;PQR=0;PRO=0;QA=954;QR=5457;RO=136;RPL=0;RPP=55.1256;RPPR=298.331;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=136;SRP=298.331;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:23,2:23:924:2:81:-0.159984,0,-75.9376 0/0:34:33,1:33:1325:1:40:0,-6.23934,-115.51 0/1:21:14,7:14:554:7:284:-19.6122,0,-43.8753 0/1:23:19,4:19:748:4:157:-7.58399,0,-60.715 0/1:36:30,6:30:1216:6:241:-11.2287,0,-98.8732 0/1:21:17,4:17:690:4:151:-7.63404,0,-56.1069 dDocent_Contig_12575 26 . C T 6308.79 . AB=0.662379;ABP=74.236;AC=6;AF=0.5;AN=12;AO=206;CIGAR=1X;DP=311;DPB=311;DPRA=0;EPP=450.334;EPPR=231.015;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.825243;PAIREDR=0.92381;PAO=0;PQA=0;PQR=0;PRO=0;QA=8158;QR=4207;RO=105;RPL=0;RPP=450.334;RPPR=231.015;RPR=206;RUN=1;SAF=206;SAP=450.334;SAR=0;SRF=105;SRP=231.015;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:40:11,29:11:445:29:1150:-91.7335,0,-28.3647 0/1:41:10,31:10:396:31:1218:-97.5442,0,-23.6534 0/1:28:11,17:11:436:17:635:-49.0363,0,-31.1627 0/1:75:35,40:35:1419:40:1606:-122.194,0,-105.381 0/1:59:19,40:19:757:40:1592:-125.742,0,-50.689 0/1:68:19,49:19:754:49:1957:-155.851,0,-47.7088 dDocent_Contig_12576 111 . G A 1674.03 . AB=0.557692;ABP=6.01695;AC=5;AF=0.416667;AN=12;AO=58;CIGAR=1X;DP=118;DPB=118;DPRA=1.48571;EPP=128.956;EPPR=133.299;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.775862;PAIREDR=0.733333;PAO=0;PQA=0;PQR=0;PRO=0;QA=2291;QR=2358;RO=60;RPL=0;RPP=128.956;RPPR=133.299;RPR=58;RUN=1;SAF=0;SAP=128.956;SAR=58;SRF=0;SRP=133.299;SRR=60;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:14,9:14:552:9:353:-25.2055,0,-43.0927 0/1:14:7,7:7:284:7:280:-21.3568,0,-21.7194 0/0:14:14,0:14:531:0:0:0,-4.21442,-48.1174 0/1:25:12,13:12:469:13:525:-40.071,0,-35.0283 0/1:22:4,18:4:160:18:716:-58.1434,0,-8.16077 0/1:20:9,11:9:362:11:417:-31.8484,0,-26.9234 dDocent_Contig_12577 11 . C T 95.0639 . AB=0.126761;ABP=88.9211;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=410;DPB=410;DPRA=0.97482;EPP=37.7539;EPPR=856.399;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.440204;PAO=0;PQA=0;PQR=0;PRO=0;QA=634;QR=15602;RO=393;RPL=0;RPP=37.7539;RPPR=856.399;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=393;SRP=856.399;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:49,1:49:1931:1:41:0,-10.9569,-169.901 0/1:71:62,9:62:2457:9:356:-11.0293,0,-199.914 0/0:54:51,2:51:2024:2:76:0,-9.13933,-175.128 0/0:96:92,4:92:3627:4:161:0,-14.0234,-311.587 0/0:63:63,0:63:2528:0:0:0,-18.9649,-227.655 0/0:76:76,0:76:3035:0:0:0,-22.8783,-273.233 dDocent_Contig_12578 9 . T A 1003.22 . AB=0.469136;ABP=3.68051;AC=4;AF=0.333333;AN=12;AO=40;CIGAR=1X;DP=124;DPB=124;DPRA=1.45333;EPP=89.8692;EPPR=185.414;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.875;PAIREDR=0.928571;PAO=0;PQA=0;PQR=0;PRO=0;QA=1527;QR=3204;RO=84;RPL=0;RPP=89.8692;RPPR=185.414;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=84;SRP=185.414;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:14,7:14:541:7:273:-18.6164,0,-42.7141 0/1:28:14,14:14:535:14:536:-40.1557,0,-40.0649 0/1:8:6,2:6:234:2:77:-4.9009,0,-19.0229 0/1:24:9,15:9:331:15:564:-43.8711,0,-22.908 0/0:28:26,2:26:982:2:77:0,-1.1197,-81.3779 0/0:15:15,0:15:581:0:0:0,-4.51545,-52.6318 dDocent_Contig_12579 60 . C T 56.8055 . AB=0.142857;ABP=49.5419;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=97;DPB=97;DPRA=1.52727;EPP=16.0391;EPPR=200.614;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.333333;PAIREDR=0.406593;PAO=0;PQA=0;PQR=0;PRO=0;QA=231;QR=3508;RO=91;RPL=6;RPP=16.0391;RPPR=200.614;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=91;SRP=200.614;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:25,3:25:980:3:122:-2.94365,0,-80.0646 0/1:14:11,3:11:427:3:109:-5.95053,0,-34.5598 0/0:4:4,0:4:158:0:0:0,-1.20412,-14.6003 0/0:25:25,0:25:944:0:0:0,-7.52575,-85.2497 0/0:11:11,0:11:401:0:0:0,-3.31133,-36.4151 0/0:15:15,0:15:598:0:0:0,-4.51545,-54.158 dDocent_Contig_12580 34 . A G 71.5281 . AB=0.185185;ABP=26.2531;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=1X;DP=87;DPB=87;DPRA=1.05357;EPP=18.2106;EPPR=176.728;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.9625;PAO=0;PQA=0;PQR=0;PRO=0;QA=276;QR=3106;RO=80;RPL=0;RPP=18.2106;RPPR=176.728;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=80;SRP=176.728;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:14,1:14:552:1:38:0,-0.718181,-46.2273 0/1:6:4,2:4:158:2:81:-5.87955,0,-12.7943 0/0:17:16,1:16:579:1:41:0,-1.02294,-48.3303 0/0:21:21,0:21:830:0:0:0,-6.32163,-75.0161 0/0:7:7,0:7:278:0:0:0,-2.10721,-25.3892 0/1:21:18,3:18:709:3:116:-4.49465,0,-57.811 dDocent_Contig_12582 6 . C A 17470.5 . AB=0.112245;ABP=770.914;AC=0;AF=0;AN=12;AO=66;CIGAR=1X3M1X8M;DP=1028;DPB=1027.92;DPRA=2.06316;EPP=146.327;EPPR=565.422;GTI=0;LEN=1;MEANALT=8;MQM=60;MQMR=60;NS=6;NUMALT=6;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2431;QR=10019;RO=259;RPL=0;RPP=146.327;RPPR=565.422;RPR=66;RUN=1;SAF=66;SAP=146.327;SAR=0;SRF=259;SRP=565.422;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:140:27,16,0,8,1,4,78:27:1034:16,0,8,1,4,78:591,0,313,27,129,3092:-244.046,-203.834,-283.869,-252.174,-288.686,-337.026,-226.439,-262.952,-311.292,-308.884,-250.317,-286.828,-335.169,-309.435,-334.868,-242.628,-279.14,-327.48,-301.746,-325.623,-326.276,0,-36.5191,-84.8604,-59.124,-83.0042,-75.3166,-61.3801 0|0:241:63,17,17,6,7,4,124:63:2430:17,17,6,7,4,124:622,657,229,210,104,4948:-386.77,-354.906,-549.334,-351.78,-500.496,-546.209,-387.222,-535.938,-532.813,-584.962,-390.842,-539.558,-536.432,-571.874,-588.28,-398.665,-547.381,-544.255,-579.697,-583.316,-597.007,0,-148.734,-145.606,-181.05,-184.673,-192.495,-162.237 0|0:207:62,33,0,20,1,5,79:62:2417:33,0,20,1,5,79:1218,0,788,27,142,3156:-240.08,-159.125,-347.855,-258.744,-357.789,-457.408,-194.077,-293.123,-392.742,-386.721,-256.886,-355.931,-455.551,-390.884,-455.25,-248.686,-347.731,-447.349,-382.683,-445.492,-445.844,0,-99.0542,-198.674,-134.006,-196.816,-188.617,-174.892 0|0:250:102,0,9,14,0,0,111:102:3946:0,9,14,0,0,111:0,364,556,0,0,4385:-324.293,-354.998,-679.118,-324.985,-649.106,-646.396,-309.224,-633.344,-603.332,-629.13,-354.998,-679.118,-649.106,-633.344,-679.118,-354.998,-679.118,-649.106,-633.344,-679.118,-679.118,0,-324.126,-294.113,-278.352,-324.126,-324.126,-290.712 0|0:95:0,0,0,2,5,2,85:0:0:0,0,2,5,2,85:0,0,70,167,66,3401:-304.93,-304.93,-304.93,-304.93,-304.93,-304.93,-299.507,-299.507,-299.507,-298.905,-292.651,-292.651,-292.651,-287.229,-291.146,-300.135,-300.135,-300.135,-294.713,-287.857,-299.533,-25.5876,-25.5876,-25.5876,-20.1608,-13.3195,-20.7966,0 0|0:95:5,0,3,1,1,9,76:5:192:0,3,1,1,9,76:0,119,30,34,305,3024:-254.155,-255.66,-271.42,-245.863,-261.624,-260.721,-253.533,-269.293,-259.497,-268.992,-253.172,-268.933,-259.137,-266.806,-268.632,-233.365,-249.125,-239.329,-246.998,-246.638,-246.416,-7.10203,-22.8783,-13.0718,-20.754,-20.3918,-0.603551,0 dDocent_Contig_12584 60 . G T 100.3 . AB=0.193548;ABP=28.2974;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=375;DPB=375;DPRA=1.08898;EPP=39.9253;EPPR=780.397;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.352941;PAIREDR=0.567039;PAO=0;PQA=0;PQR=0;PRO=0;QA=633;QR=13068;RO=358;RPL=14;RPP=18.4661;RPPR=73.7591;RPR=3;RUN=1;SAF=14;SAP=18.4661;SAR=3;SRF=233;SRP=73.7591;SRR=125;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1098:0:0:0,-9.0309,-99.1247 0/0:56:51,5:51:1859:5:182:0,-0.122862,-150.837 0/1:31:25,6:25:931:6:228:-11.5523,0,-74.7728 0/0:74:69,5:69:2537:5:187:0,-5.08422,-211.357 0/0:88:88,0:88:3163:0:0:0,-26.4906,-284.851 0/0:96:95,1:95:3480:1:36:0,-25.3006,-309.766 dDocent_Contig_12587 13 . G T 110.497 . AB=0.166667;ABP=49.335;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X1M2X1M1X;DP=303;DPB=303;DPRA=0.376471;EPP=20.3821;EPPR=637.08;GTI=0;LEN=1;MEANALT=1;MQM=46;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=318;QR=11384;RO=292;RPL=0;RPP=20.3821;RPPR=637.08;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=292;SRP=637.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:15:15,0:15:582:0:0:0,-4.51545,-52.7187 0|1:43:37,6:37:1451:6:237:-8.28749,0,-117.909 0|1:5:3,2:3:117:2:81:-5.98405,0,-9.40476 0|0:40:40,0:40:1536:0:0:0,-12.0412,-138.5 0|0:114:111,0:111:4361:0:0:0,-33.4143,-392.093 0|0:86:86,0:86:3337:0:0:0,-25.8886,-300.443 dDocent_Contig_12588 200 . A C 4369.58 . AB=0.839623;ABP=109.208;AC=3;AF=0.25;AN=12;AO=146;CIGAR=1X;DP=491;DPB=491;DPRA=1.18151;EPP=320.045;EPPR=749.997;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.924658;PAIREDR=0.927326;PAO=0;PQA=0;PQR=0;PRO=0;QA=5415;QR=13020;RO=344;RPL=146;RPP=320.045;RPPR=749.997;RPR=0;RUN=1;SAF=0;SAP=320.045;SAR=146;SRF=0;SRP=749.997;SRR=344;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:67:64,2:64:2418:2:77:0,-12.7537,-210.607 0/0:84:84,0:84:3217:0:0:0,-25.2865,-289.678 0/0:62:62,0:62:2344:0:0:0,-18.6639,-211.168 0/0:116:115,1:115:4311:1:39:0,-31.0229,-384.162 1/1:56:2,54:2:76:54:1999:-172.93,-9.64301,0 0/1:106:17,89:17:654:89:3300:-265.249,0,-27.2866 dDocent_Contig_12589 25 . G A 2253.58 . AB=0.392523;ABP=24.4815;AC=3;AF=0.25;AN=12;AO=98;CIGAR=1X3M;DP=538;DPB=538;DPRA=0;EPP=144.821;EPPR=947.601;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.806122;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3825;QR=16880;RO=435;RPL=0;RPP=215.815;RPPR=947.601;RPR=98;RUN=1;SAF=89;SAP=144.821;SAR=9;SRF=435;SRP=947.601;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:59:51,4,4:51:1992:4,4:161,152:0,-2.07201,-164.632,-2.90033,-153.374,-165.44 0|0:205:197,0,8:197:7663:0,8:0,325:0,-59.3029,-688.985,-32.0915,-662.178,-659.77 0|1:117:90,0,26:90:3456:0,26:0,1019:-56.7505,-83.8432,-367.492,0,-283.706,-275.879 0|0:60:58,0,2:58:2250:0,2:0,80:0,-17.4597,-202.296,-10.47,-195.706,-195.104 0|1:6:1,0,5:1:40:0,5:0,201:-16.6649,-16.966,-20.2607,0,-3.69465,-2.1895 0|1:91:38,0,53:38:1479:0,53:0,2048:-157.12,-168.559,-290.103,0,-121.932,-105.977 dDocent_Contig_12590 127 . C A 182.157 . AB=0.236842;ABP=25.8679;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=121;DPB=121;DPRA=1.57447;EPP=26.8965;EPPR=239.701;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.807339;PAO=0;PQA=0;PQR=0;PRO=0;QA=438;QR=4386;RO=109;RPL=11;RPP=26.8965;RPPR=239.701;RPR=0;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=239.701;SRR=109;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:975:0:0:0,-7.22472,-88.0468 0/0:6:6,0:6:240:0:0:0,-1.80618,-21.9745 0/1:14:10,3:10:402:3:122:-7.05047,0,-32.2172 0/1:24:18,6:18:722:6:236:-14.387,0,-58.081 0/0:17:17,0:17:661:0:0:0,-5.11751,-59.8127 0/0:36:34,2:34:1386:2:80:0,-3.2455,-117.394 dDocent_Contig_12591 36 . C T 1174.76 . AB=0.37931;ABP=17.6865;AC=2;AF=0.25;AN=8;AO=44;CIGAR=1X;DP=176;DPB=176;DPRA=1.93333;EPP=98.5551;EPPR=289.645;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1724;QR=5170;RO=132;RPL=0;RPP=98.5551;RPPR=289.645;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=132;SRP=289.645;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:56:36,20:36:1403:20:777:-53.3969,0,-109.667 0/1:60:36,24:36:1419:24:947:-67.4768,0,-109.91 0/0:29:29,0:29:1140:0:0:0,-8.72987,-102.879 0/0:31:31,0:31:1208:0:0:0,-9.33193,-108.997 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12593 23 . C A 718.274 . AB=0.160279;ABP=290.711;AC=2;AF=0.166667;AN=12;AO=59;CIGAR=1X;DP=684;DPB=684;DPRA=2.30435;EPP=131.127;EPPR=1360.18;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992;PAO=0;PQA=0;PQR=0;PRO=0;QA=2302;QR=25074;RO=625;RPL=0;RPP=131.127;RPPR=1360.18;RPR=59;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=625;SRP=1360.18;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:191:158,33:158:6301:33:1270:-57.0739,0,-509.338 0/0:114:114,0:114:4596:0:0:0,-34.3174,-413.552 0/1:96:83,13:83:3314:13:517:-17.9753,0,-269.411 0/0:190:177,13:177:7101:13:515:0,-10.4998,-592.039 0/0:38:38,0:38:1543:0:0:0,-11.4391,-139.103 0/0:55:55,0:55:2219:0:0:0,-16.5566,-199.876 dDocent_Contig_12594 75 . G A 331.337 . AB=0.170543;ABP=124.63;AC=1;AF=0.0833333;AN=12;AO=26;CIGAR=1X;DP=680;DPB=680;DPRA=1.309;EPP=59.4686;EPPR=1420.98;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.998469;PAO=0;PQA=0;PQR=0;PRO=0;QA=960;QR=24209;RO=653;RPL=26;RPP=59.4686;RPPR=1420.98;RPR=0;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=653;SRP=1420.98;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:158:158,0:158:5677:0:0:0,-47.5627,-511.013 0/0:140:135,4:135:4906:4:147:0,-28.3907,-428.128 0/0:149:149,0:149:5661:0:0:0,-44.8535,-509.472 0/1:129:107,22:107:4001:22:813:-34.6566,0,-321.354 0/0:13:13,0:13:498:0:0:0,-3.91339,-45.1674 0/0:91:91,0:91:3466:0:0:0,-27.3937,-312.074 dDocent_Contig_12595 20 . T C 521.959 . AB=0.176829;ABP=151.783;AC=1;AF=0.0833333;AN=12;AO=41;CIGAR=1X;DP=957;DPB=957;DPRA=1.07223;EPP=92.0407;EPPR=1992.08;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.95122;PAIREDR=0.947598;PAO=0;PQA=0;PQR=0;PRO=0;QA=1616;QR=35197;RO=916;RPL=0;RPP=92.0407;RPPR=1992.08;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=916;SRP=1992.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:164:135,29:135:5197:29:1139:-53.4178,0,-418.307 0/0:249:249,0:249:9591:0:0:0,-74.9565,-862.782 0/0:107:107,0:107:4121:0:0:0,-32.2102,-370.923 0/0:170:158,12:158:6068:12:477:0,-7.89702,-502.727 0/0:155:155,0:155:5915:0:0:0,-46.6596,-532.28 0/0:112:112,0:112:4305:0:0:0,-33.7154,-387.489 dDocent_Contig_12596 1 . N G 1091.41 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=35;CIGAR=1X;DP=35;DPB=35;DPRA=0;EPP=79.0118;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1182;QR=0;RO=0;RPL=0;RPP=79.0118;RPPR=0;RPR=35;RUN=1;SAF=0;SAP=79.0118;SAR=35;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:138:-12.7604,-1.20412,0 1/1:7:0,7:0:0:7:244:-22.3001,-2.10721,0 1/1:1:0,1:0:0:1:25:-2.49986,-0.30103,0 1/1:9:0,9:0:0:9:304:-27.6879,-2.70927,0 1/1:7:0,7:0:0:7:229:-20.9296,-2.10721,0 1/1:7:0,7:0:0:7:242:-22.1177,-2.10721,0 dDocent_Contig_12597 36 . C T 4189.8 . AB=0.466454;ABP=6.06979;AC=6;AF=0.5;AN=12;AO=146;CIGAR=1X;DP=313;DPB=313;DPRA=0;EPP=320.045;EPPR=365.646;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.623288;PAIREDR=0.497006;PAO=0;PQA=0;PQR=0;PRO=0;QA=5807;QR=6721;RO=167;RPL=0;RPP=320.045;RPPR=365.646;RPR=146;RUN=1;SAF=146;SAP=320.045;SAR=0;SRF=167;SRP=365.646;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:50:18,32:18:714:32:1268:-99.3397,0,-49.5313 0/1:57:25,32:25:1009:32:1264:-96.8708,0,-73.9451 0/1:62:36,26:36:1451:26:1038:-75.0469,0,-112.173 0/1:37:19,18:19:765:18:721:-54.0775,0,-58.0324 0/1:49:35,14:35:1408:14:564:-36.352,0,-112.219 0/1:58:34,24:34:1374:24:952:-68.5146,0,-106.454 dDocent_Contig_12598 7 . A T 209.198 . AB=0.170732;ABP=41.6201;AC=3;AF=0.25;AN=12;AO=11;CIGAR=1X;DP=97;DPB=97;DPRA=1.93939;EPP=26.8965;EPPR=189.757;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=413;QR=3309;RO=86;RPL=0;RPP=26.8965;RPPR=189.757;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=86;SRP=189.757;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:344:0:0:0,-2.70927,-31.3177 0/1:41:34,7:34:1312:7:258:-11.2311,0,-106.026 0/0:20:19,1:19:732:1:38:0,-2.22333,-62.4144 0/0:17:17,0:17:648:0:0:0,-5.11751,-58.6559 1/1:3:0,3:0:0:3:117:-10.9104,-0.90309,0 0/0:7:7,0:7:273:0:0:0,-2.10721,-24.938 dDocent_Contig_12600 12 . C A 2497.02 . AB=0.0606061;ABP=58.3499;AC=0;AF=0;AN=12;AO=2;CIGAR=1M2X;DP=221;DPB=241.333;DPRA=0;EPP=7.35324;EPPR=241.872;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0.5;PAO=0;PQA=0;PQR=0;PRO=0;QA=80;QR=4401;RO=110;RPL=0;RPP=7.35324;RPPR=241.872;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=110;SRP=241.872;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:15:10,4,0,1:10:402:4,0,1:134,0,41:-7.77522,0,-31.9171,-10.7855,-33.1212,-43.9485,-7.38649,-29.7364,-40.5626,-40.2616 0|0:42:15,21,0,6:15:607:21,0,6:839,0,233:-64.5884,0,-43.7386,-69.1039,-50.0603,-119.155,-49.965,-30.9236,-100.016,-98.2096 0|0:33:16,15,0,2:16:643:15,0,2:603,0,82:-44.8677,0,-48.4653,-49.6841,-52.9807,-102.672,-42.9151,-46.2117,-95.9029,-95.3008 0|0:33:10,16,2,4:10:397:16,2,4:643,80,157:-49.9815,0,-27.8656,-46.4018,-26.0917,-78.4802,-40.0817,-19.7717,-66.1715,-71.5574 0|0:40:27,2,0,11:27:1085:2,0,11:82,0,433:-27.4735,-28.8306,-117.643,-35.6013,-118.245,-125.014,0,-82.6324,-89.4012,-86.0898 0|0:58:32,3,0,23:32:1267:3,0,23:120,0,921:-66.2372,-65.9852,-169.351,-75.8701,-170.254,-180.139,0,-94.3823,-104.268,-97.344 dDocent_Contig_12601 60 . T A 493.326 . AB=0.169154;ABP=194.111;AC=3;AF=0.25;AN=12;AO=42;CIGAR=1X;DP=384;DPB=384;DPRA=1.05902;EPP=94.2121;EPPR=745.654;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.619048;PAIREDR=0.54386;PAO=0;PQA=0;PQR=0;PRO=0;QA=1581;QR=12824;RO=342;RPL=24;RPP=4.87156;RPPR=34.122;RPR=18;RUN=1;SAF=24;SAP=4.87156;SAR=18;SRF=206;SRP=34.122;SRR=136;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:61:61,0:61:2312:0:0:0,-18.3628,-208.278 0/0:86:80,6:80:3022:6:238:0,-4.09603,-250.335 0/1:37:31,6:31:1186:6:227:-9.65253,0,-95.8784 0/1:94:78,16:78:2893:16:602:-26.2148,0,-232.238 0/0:36:34,2:34:1232:2:76:0,-3.62354,-103.946 0/1:70:58,12:58:2179:12:438:-18.6872,0,-175.247 dDocent_Contig_12602 35 . A G 77.7331 . AB=0.15;ABP=45.5712;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=264;DPB=264;DPRA=0.892857;EPP=16.0391;EPPR=563.25;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.844961;PAO=0;PQA=0;PQR=0;PRO=0;QA=233;QR=10246;RO=258;RPL=0;RPP=16.0391;RPPR=563.25;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=258;SRP=563.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:1001:0:0:0,-7.52575,-90.3857 0/0:39:39,0:39:1556:0:0:0,-11.7402,-140.281 0/0:43:43,0:43:1677:0:0:0,-12.9443,-151.142 0/1:40:34,6:34:1331:6:233:-9.29619,0,-108.004 0/0:54:54,0:54:2160:0:0:0,-16.2556,-194.574 0/0:63:63,0:63:2521:0:0:0,-18.9649,-227.031 dDocent_Contig_12603 31 . C T 44.8693 . AB=0.119048;ABP=55.9529;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=292;DPB=292;DPRA=0.84;EPP=13.8677;EPPR=626.223;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=203;QR=11506;RO=287;RPL=0;RPP=13.8677;RPPR=626.223;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=287;SRP=626.223;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1064:0:0:0,-8.12781,-96.049 0/0:47:47,0:47:1900:0:0:0,-14.1484,-171.196 0/0:116:116,0:116:4660:0:0:0,-34.9195,-419.308 0/1:42:37,5:37:1482:5:203:-6.0098,0,-120.982 0/0:28:28,0:28:1130:0:0:0,-8.42884,-101.981 0/0:32:32,0:32:1270:0:0:0,-9.63296,-114.569 dDocent_Contig_12604 54 . A G 85.3505 . AB=0.125;ABP=90.9549;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=299;DPB=299;DPRA=0.823009;EPP=31.2394;EPPR=624.051;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.384615;PAIREDR=0.48951;PAO=0;PQA=0;PQR=0;PRO=0;QA=523;QR=11385;RO=286;RPL=13;RPP=31.2394;RPPR=624.051;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=286;SRP=624.051;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:19,2:19:753:2:82:-1.45805,0,-61.7682 0/1:51:44,7:44:1752:7:278:-10.0376,0,-142.548 0/0:50:47,3:47:1877:3:122:0,-3.67901,-157.764 0/0:64:63,1:63:2518:1:41:0,-15.1714,-222.667 0/0:46:46,0:46:1840:0:0:0,-13.8474,-165.812 0/0:67:67,0:67:2645:0:0:0,-20.169,-238.182 dDocent_Contig_12605 33 . T C 806.02 . AB=0.290598;ABP=47.5719;AC=3;AF=0.25;AN=12;AO=34;CIGAR=1X;DP=294;DPB=294;DPRA=0.661017;EPP=76.8404;EPPR=565.422;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.941176;PAIREDR=0.942085;PAO=0;PQA=0;PQR=0;PRO=0;QA=1335;QR=10226;RO=259;RPL=0;RPP=76.8404;RPPR=565.422;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=259;SRP=565.422;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:39,0:39:1546:0:0:0,-11.7402,-139.379 0/1:51:45,6:45:1782:6:209:-3.78542,0,-145.233 0/0:73:73,0:73:2882:0:0:0,-21.9752,-259.491 0/0:65:65,0:65:2574:0:0:0,-19.5669,-231.788 0/1:38:13,24:13:513:24:970:-76.0503,0,-34.9619 0/1:28:24,4:24:929:4:156:-5.98699,0,-75.4858 dDocent_Contig_12606 7 . A T 374.738 . AB=0.186992;ABP=107.682;AC=4;AF=0.333333;AN=12;AO=25;CIGAR=1X;DP=181;DPB=181;DPRA=0;EPP=57.2971;EPPR=341.76;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.52;PAIREDR=0.480769;PAO=0;PQA=0;PQR=0;PRO=0;QA=939;QR=5970;RO=156;RPL=0;RPP=57.2971;RPPR=341.76;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=156;SRP=341.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:28,1:28:1073:1:39:0,-4.83331,-92.9793 0/0:29:28,1:28:1077:1:23:0,-6.42996,-94.9357 0/1:29:24,5:24:918:5:189:-8.64539,0,-74.2079 0/1:26:19,7:19:737:7:263:-16.1998,0,-58.8343 0/1:34:31,3:31:1188:3:117:-0.675361,0,-96.9826 0/1:34:26,8:26:977:8:308:-17.8471,0,-78.0042 dDocent_Contig_12608 108 . C T 151.269 . AB=0.5;ABP=3.0103;AC=3;AF=0.25;AN=12;AO=6;CIGAR=1X4M;DP=104;DPB=104;DPRA=0.212766;EPP=16.0391;EPPR=211.472;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=201;QR=3228;RO=96;RPL=0;RPP=16.0391;RPPR=211.472;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=211.472;SRR=96;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:28:28,0,0:28:942:0,0:0,0:0,-8.42884,-85.0898,-8.42884,-85.0898,-85.0898 0|0:23:23,0,0:23:779:0,0:0,0:0,-6.92369,-70.4254,-6.92369,-70.4254,-70.4254 0|0:7:7,0,0:7:225:0,0:0,0:0,-2.10721,-20.5654,-2.10721,-20.5654,-20.5654 0|0:36:34,2,0:34:1144:2,0:69,0:0,-4.28442,-96.709,-10.235,-97.311,-102.917 1|1:2:0,0,2:0:0:0,2:0,68:-6.45788,-6.45788,-6.45788,-0.60206,-0.60206,0 0|1:8:4,0,4:4:138:0,4:0,133:-9.89052,-11.0946,-22.3123,0,-11.5563,-10.3522 dDocent_Contig_12611 25 . C T 36.9686 . AB=0.333333;ABP=4.45795;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=2X;DP=42;DPB=42;DPRA=0.833333;EPP=3.0103;EPPR=87.6977;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=74;QR=1567;RO=39;RPL=0;RPP=7.35324;RPPR=87.6977;RPR=2;RUN=1;SAF=1;SAP=3.0103;SAR=1;SRF=39;SRP=87.6977;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:9:9,0:9:358:0:0:0,-2.70927,-32.5821 0|0:4:4,0:4:162:0:0:0,-1.20412,-14.967 0|0:6:6,0:6:239:0:0:0,-1.80618,-21.8832 0|0:8:8,0:8:320:0:0:0,-2.40824,-29.1673 0|0:9:8,0:8:324:0:0:0,-2.40824,-29.1203 0|1:6:4,2:4:164:2:74:-5.21959,0,-13.3437 dDocent_Contig_12612 37 . G A 676.373 . AB=0.353659;ABP=18.2636;AC=4;AF=0.333333;AN=12;AO=31;CIGAR=2X;DP=134;DPB=134;DPRA=6.5;EPP=70.3259;EPPR=226.672;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1171;QR=3934;RO=103;RPL=0;RPP=70.3259;RPPR=226.672;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=103;SRP=226.672;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:15:9,6:9:356:6:239:-17.3699,0,-27.8877 0|1:37:22,15:22:815:15:576:-41.0365,0,-62.5215 0|1:25:19,6:19:741:6:216:-12.26,0,-59.4932 0|0:48:46,2:46:1756:2:80:0,-6.85786,-150.691 0|0:4:4,0:4:154:0:0:0,-1.20412,-14.2333 0|1:5:3,2:3:112:2:60:-4.19219,0,-8.94014 dDocent_Contig_12613 107 . N A 866.048 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=30;CIGAR=1X;DP=30;DPB=30;DPRA=0;EPP=68.1545;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=948;QR=0;RO=0;RPL=0;RPP=68.1545;RPPR=0;RPR=30;RUN=1;SAF=0;SAP=68.1545;SAR=30;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:14:0,14:0:0:14:448:-40.6287,-4.21442,0 1/1:15:0,15:0:0:15:481:-43.5965,-4.51545,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:19:-1.89997,-0.30103,0 dDocent_Contig_12615 21 . C T 61.5562 . AB=0.121622;ABP=95.0338;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=421;DPB=421;DPRA=1.37853;EPP=42.0968;EPPR=875.942;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.777778;PAIREDR=0.848259;PAO=0;PQA=0;PQR=0;PRO=0;QA=683;QR=16082;RO=402;RPL=0;RPP=42.0968;RPPR=875.942;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=402;SRP=875.942;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:51:51,0:51:2056:0:0:0,-15.3525,-185.223 0/1:74:65,9:65:2609:9:329:-7.67806,0,-212.662 0/0:55:55,0:55:2226:0:0:0,-16.5566,-200.498 0/0:85:83,2:83:3306:2:78:0,-18.1841,-290.186 0/0:71:71,0:71:2843:0:0:0,-21.3731,-255.973 0/0:85:77,7:77:3042:7:276:0,-0.216112,-248.695 dDocent_Contig_12616 12 . T A 113.343 . AB=0.184211;ABP=35.9253;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=182;DPB=182;DPRA=0.609756;EPP=24.725;EPPR=376.504;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.6;PAIREDR=0.761628;PAO=0;PQA=0;PQR=0;PRO=0;QA=403;QR=6919;RO=172;RPL=0;RPP=24.725;RPPR=376.504;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=172;SRP=376.504;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:22,1:22:885:1:41:0,-2.82912,-75.862 0/1:17:15,2:15:602:2:80:-2.47428,0,-49.3982 0/1:21:16,5:16:647:5:200:-12.0583,0,-52.2418 0/0:39:37,2:37:1500:2:82:0,-3.96049,-127.459 0/0:31:31,0:31:1261:0:0:0,-9.33193,-113.754 0/0:51:51,0:51:2024:0:0:0,-15.3525,-182.349 dDocent_Contig_12617 18 . C T 53.8188 . AB=0.118644;ABP=77.5396;AC=1;AF=0.0833333;AN=12;AO=32;CIGAR=1X;DP=541;DPB=541;DPRA=0.783636;EPP=72.4974;EPPR=1108.29;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8723;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.84375;PAIREDR=0.915521;PAO=0;PQA=0;PQR=0;PRO=0;QA=1229;QR=20221;RO=509;RPL=0;RPP=72.4974;RPPR=1108.29;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=509;SRP=1108.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:65:62,3:62:2474:3:105:0,-9.77085,-213.013 0/0:110:110,0:110:4322:0:0:0,-33.1133,-388.939 0/0:99:94,5:94:3726:5:195:0,-11.8782,-317.237 0/0:128:117,11:117:4670:11:424:0,-0.0195262,-381.68 0/1:59:52,7:52:2077:7:270:-6.90406,0,-169.354 0/0:80:74,6:74:2952:6:235:0,-2.5609,-244.253 dDocent_Contig_12618 18 . T G 300.884 . AB=0.167598;ABP=174.799;AC=3;AF=0.25;AN=12;AO=35;CIGAR=1X;DP=373;DPB=373;DPRA=0;EPP=79.0118;EPPR=734.797;GTI=0;LEN=1;MEANALT=1.16667;MQM=34.6857;MQMR=53.1958;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.0285714;PAIREDR=0.62908;PAO=0;PQA=0;PQR=0;PRO=0;QA=1336;QR=13149;RO=337;RPL=0;RPP=79.0118;RPPR=734.797;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=337;SRP=734.797;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:60:57,2:57:2225:2:70:0,-12.6104,-190.246 0/1:53:47,6:47:1847:6:228:-2.45341,0,-143.745 0/0:80:78,2:78:3049:2:79:0,-17.8281,-262.977 0/1:65:48,17:48:1885:17:652:-30.3866,0,-147.28 0/1:61:54,7:54:2106:7:267:-2.42021,0,-169.099 0/0:54:53,1:53:2037:1:40:0,-12.9529,-176.155 dDocent_Contig_12620 11 . A G 793.678 . AB=0.224044;ABP=124.055;AC=3;AF=0.3;AN=10;AO=42;CIGAR=1X3M1X;DP=246;DPB=246;DPRA=6.58333;EPP=94.2121;EPPR=445.991;GTI=0;LEN=1;MEANALT=1;MQM=58.1429;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0.952381;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1613;QR=8019;RO=204;RPL=0;RPP=94.2121;RPPR=445.991;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=204;SRP=445.991;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:15:11,4:11:437:4:149:-9.25548,0,-35.1696 0|1:100:89,11:89:3515:11:408:-6.95908,0,-286.307 0|0:54:53,1:53:2091:1:40:0,-12.2599,-184.386 0|1:68:42,26:42:1621:26:1016:-68.4543,0,-125.673 .:.:.:.:.:.:.:. 0|0:9:9,0:9:355:0:0:0,-2.70927,-32.3118 dDocent_Contig_12621 68 . C T 222.605 . AB=0.3125;ABP=12.7819;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=337;DPB=337;DPRA=0.766917;EPP=33.4109;EPPR=704.396;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.934985;PAO=0;PQA=0;PQR=0;PRO=0;QA=528;QR=12712;RO=323;RPL=14;RPP=33.4109;RPPR=704.396;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=323;SRP=704.396;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:59,0:59:2329:0:0:0,-17.7608,-209.783 0/0:74:74,0:74:2923:0:0:0,-22.2762,-263.181 0/0:79:77,2:77:3053:2:75:0,-16.661,-267.75 0/0:93:91,2:91:3546:2:71:0,-21.2539,-312.452 0/1:16:12,4:12:471:4:151:-9.1413,0,-37.9217 0/1:16:10,6:10:390:6:231:-16.341,0,-30.6391 dDocent_Contig_12622 20 . A T 1309.58 . AB=0.322981;ABP=46.8309;AC=6;AF=0.5;AN=12;AO=52;CIGAR=1X;DP=161;DPB=161;DPRA=0;EPP=115.927;EPPR=239.701;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.615385;PAIREDR=0.651376;PAO=0;PQA=0;PQR=0;PRO=0;QA=2094;QR=4227;RO=109;RPL=0;RPP=115.927;RPPR=239.701;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=109;SRP=239.701;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:18:12,6:12:469:6:241:-16.6466,0,-37.1419 0/1:37:20,17:20:788:17:682:-50.5687,0,-60.1021 0/1:22:18,4:18:713:4:159:-8.06929,0,-57.8711 0/1:30:21,9:21:817:9:365:-24.1836,0,-64.8162 0/1:30:19,11:19:707:11:442:-31.1018,0,-54.9136 0/1:24:19,5:19:733:5:205:-11.6103,0,-59.068 dDocent_Contig_12623 10 . A G 360.759 . AB=0.239437;ABP=44.88;AC=2;AF=0.166667;AN=12;AO=18;CIGAR=1X;DP=255;DPB=255;DPRA=0.875;EPP=42.0968;EPPR=517.649;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.333333;PAIREDR=0.421941;PAO=0;PQA=0;PQR=0;PRO=0;QA=707;QR=9429;RO=237;RPL=0;RPP=42.0968;RPPR=517.649;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=237;SRP=517.649;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:47:47,0:47:1864:0:0:0,-14.1484,-167.974 0/1:45:31,14:31:1237:14:545:-35.8418,0,-98.0518 0/1:26:23,3:23:925:3:121:-3.45342,0,-75.7272 0/0:48:47,1:47:1871:1:41:0,-10.3549,-164.503 0/0:37:37,0:37:1489:0:0:0,-11.1381,-134.256 0/0:52:52,0:52:2043:0:0:0,-15.6536,-184.061 dDocent_Contig_12626 19 . C T 1463.16 . AB=0.325714;ABP=49.182;AC=5;AF=0.416667;AN=12;AO=58;CIGAR=1X;DP=224;DPB=224;DPRA=0;EPP=128.956;EPPR=363.475;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.534483;PAIREDR=0.518072;PAO=0;PQA=0;PQR=0;PRO=0;QA=2335;QR=6638;RO=166;RPL=0;RPP=128.956;RPPR=363.475;RPR=58;RUN=1;SAF=58;SAP=128.956;SAR=0;SRF=166;SRP=363.475;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:21,9:21:843:9:355:-23.2785,0,-67.151 0/1:36:23,13:23:918:13:529:-37.1196,0,-72.0902 0/1:32:23,9:23:918:9:362:-23.311,0,-73.2884 0/1:46:24,22:24:954:22:889:-66.4703,0,-72.3143 0/1:31:27,4:27:1056:4:159:-5.3589,0,-85.9963 0/0:49:48,1:48:1949:1:41:0,-10.6559,-171.504 dDocent_Contig_12627 14 . G C 90.4179 . AB=0.104294;ABP=224.7;AC=1;AF=0.0833333;AN=12;AO=39;CIGAR=1X;DP=655;DPB=655;DPRA=0.865041;EPP=87.6977;EPPR=1340.64;GTI=0;LEN=1;MEANALT=1;MQM=57.9231;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.692308;PAIREDR=0.987013;PAO=0;PQA=0;PQR=0;PRO=0;QA=1573;QR=24512;RO=616;RPL=0;RPP=87.6977;RPPR=1340.64;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=616;SRP=1340.64;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:66:62,4:62:2450:4:160:0,-5.08455,-205.872 0/0:115:111,4:111:4397:4:159:0,-19.9276,-380.994 0/0:47:44,3:44:1785:3:123:0,-2.68362,-149.39 0/0:123:123,0:123:4893:0:0:0,-37.0267,-440.261 0/0:141:130,11:130:5167:11:447:0,-1.85973,-424.322 0/1:163:146,17:146:5820:17:684:-10.5647,0,-474.52 dDocent_Contig_12629 20 . C G 194.702 . AB=0.219512;ABP=31.0276;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=326;DPB=326;DPRA=0.719298;EPP=22.5536;EPPR=691.367;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=363;QR=12671;RO=317;RPL=0;RPP=22.5536;RPPR=691.367;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=317;SRP=691.367;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:32,9:32:1296:9:363:-20.6921,0,-104.561 0/0:46:46,0:46:1853:0:0:0,-13.8474,-166.969 0/0:35:35,0:35:1408:0:0:0,-10.536,-126.972 0/0:8:8,0:8:316:0:0:0,-2.40824,-28.8009 0/0:64:64,0:64:2554:0:0:0,-19.2659,-229.988 0/0:132:132,0:132:5244:0:0:0,-39.736,-471.799 dDocent_Contig_12630 8 . T A 69.6752 . AB=0.175573;ABP=122.773;AC=3;AF=0.25;AN=12;AO=26;CIGAR=2X;DP=264;DPB=264;DPRA=0.76;EPP=59.4686;EPPR=513.306;GTI=0;LEN=1;MEANALT=1.4;MQM=23.5385;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=986;QR=9005;RO=235;RPL=0;RPP=59.4686;RPPR=513.306;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=235;SRP=513.306;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:27:26,1:26:981:1:39:0,-5.93634,-86.409 0|1:48:36,10:36:1384:10:380:-8.47519,0,-110.778 0|1:35:29,6:29:1095:6:228:-0.600679,0,-88.3168 0|1:48:41,7:41:1572:7:262:-1.24044,0,-127.302 0|0:55:55,0:55:2126:0:0:0,-16.5566,-191.567 0|0:51:48,2:48:1847:2:77:0,-11.1022,-162.319 dDocent_Contig_12632 28 . A G 79.7409 . AB=0.12963;ABP=67.3502;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=243;DPB=243;DPRA=1.31343;EPP=26.8965;EPPR=504.62;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.818182;PAIREDR=0.506494;PAO=0;PQA=0;PQR=0;PRO=0;QA=441;QR=9201;RO=231;RPL=0;RPP=26.8965;RPPR=504.62;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=231;SRP=504.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:34,1:34:1364:1:36:0,-6.93777,-119.421 0/1:54:47,7:47:1850:7:282:-9.49697,0,-150.452 0/0:37:35,2:35:1372:2:82:0,-3.35843,-115.955 0/0:50:49,1:49:1959:1:41:0,-10.9569,-172.408 0/0:37:37,0:37:1488:0:0:0,-11.1381,-134.165 0/0:30:29,0:29:1168:0:0:0,-8.72987,-105.056 dDocent_Contig_12635 98 . N C 66.4848 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=3X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=70;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_12637 22 . A G 130.326 . AB=0.124138;ABP=180.936;AC=6;AF=0.5;AN=12;AO=18;CIGAR=1X;DP=145;DPB=145;DPRA=0;EPP=42.0968;EPPR=278.787;GTI=0;LEN=1;MEANALT=1;MQM=47.4444;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.433071;PAO=0;PQA=0;PQR=0;PRO=0;QA=726;QR=5045;RO=127;RPL=0;RPP=42.0968;RPPR=278.787;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=127;SRP=278.787;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:17,3:17:657:3:116:-4.48857,0,-53.4364 0/1:31:28,3:28:1102:3:122:-1.84764,0,-90.1312 0/1:21:18,3:18:728:3:123:-4.93716,0,-59.5224 0/1:42:37,5:37:1466:5:203:-5.69714,0,-119.546 0/1:20:17,3:17:688:3:121:-5.07974,0,-56.2293 0/1:11:10,1:10:404:1:41:-0.709666,0,-33.4087 dDocent_Contig_12638 128 . C T 115.047 . AB=0.151899;ABP=86.1585;AC=3;AF=0.3;AN=10;AO=12;CIGAR=1X;DP=90;DPB=90;DPRA=4.78788;EPP=29.068;EPPR=172.385;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=439;QR=2770;RO=78;RPL=0;RPP=29.068;RPPR=172.385;RPR=12;RUN=1;SAF=0;SAP=29.068;SAR=12;SRF=0;SRP=172.385;SRR=78;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:16,4:16:579:4:148:-7.66137,0,-46.4234 0/1:33:29,4:29:1019:4:148:-3.74798,0,-82.0767 0/0:10:10,0:10:359:0:0:0,-3.0103,-32.6529 0/1:26:22,4:22:779:4:143:-5.39431,0,-62.6028 ./.:.:.:.:.:.:.:. 0/0:1:1,0:1:34:0:0:0,-0.30103,-3.39891 dDocent_Contig_12639 29 . C T 32.2722 . AB=0.130435;ABP=30.2953;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=144;DPB=144;DPRA=1.23596;EPP=11.6962;EPPR=307.016;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=0.75;PAIREDR=0.857143;PAO=0;PQA=0;PQR=0;PRO=0;QA=163;QR=5561;RO=140;RPL=0;RPP=11.6962;RPPR=307.016;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=140;SRP=307.016;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:20,3:20:797:3:122:-4.4488,0,-65.123 0/0:32:31,1:31:1243:1:41:0,-5.53839,-108.047 0/0:17:17,0:17:686:0:0:0,-5.11751,-62.0691 0/0:39:39,0:39:1548:0:0:0,-11.7402,-139.565 0/0:6:6,0:6:241:0:0:0,-1.80618,-22.0667 0/0:27:27,0:27:1046:0:0:0,-8.12781,-94.428 dDocent_Contig_12640 23 . G A 485.039 . AB=0.230769;ABP=68.4885;AC=4;AF=0.333333;AN=12;AO=24;CIGAR=1X;DP=143;DPB=143;DPRA=1.33333;EPP=55.1256;EPPR=181.856;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.958333;PAIREDR=0.680672;PAO=0;PQA=0;PQR=0;PRO=0;QA=949;QR=4671;RO=119;RPL=0;RPP=55.1256;RPPR=261.416;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=109;SRP=181.856;SRR=10;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:400:0:0:0,-3.0103,-36.3573 0/1:43:39,4:39:1499:4:161:-1.93119,0,-122.207 0/1:18:13,5:13:528:5:193:-12.3202,0,-42.4486 0/1:29:25,4:25:973:4:164:-6.42003,0,-79.1361 0/1:14:3,11:3:117:11:431:-34.9278,0,-6.69487 0/0:29:29,0:29:1154:0:0:0,-8.72987,-104.141 dDocent_Contig_12641 54 . T C 63.3637 . AB=0.173913;ABP=24.253;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=74;DPB=74;DPRA=2.2549;EPP=11.6962;EPPR=155.013;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.957143;PAO=0;PQA=0;PQR=0;PRO=0;QA=160;QR=2542;RO=70;RPL=4;RPP=11.6962;RPPR=155.013;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=70;SRP=155.013;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:222:0:0:0,-2.10721,-20.2875 0/0:17:17,0:17:617:0:0:0,-5.11751,-55.8552 0/0:7:7,0:7:236:0:0:0,-2.10721,-21.5635 0/0:14:14,0:14:506:0:0:0,-4.21442,-45.8732 0/0:6:6,0:6:230:0:0:0,-1.80618,-21.0666 0/1:23:19,4:19:731:4:160:-7.85923,0,-59.1947 dDocent_Contig_12642 23 . A T 1004.94 . AB=0.169444;ABP=344.679;AC=5;AF=0.416667;AN=12;AO=62;CIGAR=1X;DP=400;DPB=400;DPRA=0;EPP=137.642;EPPR=736.968;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.612903;PAIREDR=0.62426;PAO=0;PQA=0;PQR=0;PRO=0;QA=2445;QR=13297;RO=338;RPL=0;RPP=137.642;RPPR=736.968;RPR=62;RUN=1;SAF=62;SAP=137.642;SAR=0;SRF=338;SRP=736.968;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:65:47,18:47:1843:18:724:-45.9186,0,-146.516 0/1:69:59,10:59:2271:10:402:-15.7665,0,-183.775 0/1:58:51,7:51:1990:7:286:-8.65508,0,-161.84 0/1:74:63,11:63:2522:11:431:-16.8639,0,-204.84 0/0:40:39,1:39:1541:1:41:0,-7.94663,-134.831 0/1:94:79,15:79:3130:15:561:-22.5121,0,-253.486 dDocent_Contig_12643 21 . A T 4922.03 . AB=0.0987654;ABP=342.806;AC=1;AF=0.0833333;AN=12;AO=24;CIGAR=1X3M1X;DP=243;DPB=243;DPRA=0;EPP=55.1256;EPPR=135.47;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.916667;PAIREDR=0.967213;PAO=0;PQA=0;PQR=0;PRO=0;QA=886;QR=2363;RO=61;RPL=0;RPP=55.1256;RPPR=135.47;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=61;SRP=135.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:41:5,2,34:5:191:2,34:79,1327:-107.56,-102.564,-117.629,0,-9.15396,-5.42361 0|0:52:19,1,32:19:734:1,32:39,1288:-100.442,-102.956,-162.931,0,-57.0719,-50.645 1|0:41:8,11,22:8:302:11,22:400,888:-78.7237,-48.48,-69.9079,-7.90534,0,-26.0346 0|0:50:10,4,35:10:393:4,35:143,1409:-113.151,-104.507,-135.627,0,-20.6987,-21.8128 0|0:22:6,1,14:6:237:1,14:38,566:-44.9269,-43.6175,-62.8186,0,-16.4377,-15.3401 0|0:37:13,5,19:13:506:5,19:187,759:-58.6201,-47.2267,-87.3013,0,-26.2869,-35.8752 dDocent_Contig_12645 30 . A G 552.168 . AB=0.125;ABP=42.0968;AC=2;AF=0.166667;AN=12;AO=4;CIGAR=1M1X10M;DP=90;DPB=90.3333;DPRA=1.68421;EPP=11.6962;EPPR=141.985;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.953125;PAO=0;PQA=0;PQR=0;PRO=0;QA=158;QR=2482;RO=64;RPL=0;RPP=11.6962;RPPR=141.985;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=64;SRP=141.985;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:15:15,0,0,0:15:576:0,0,0:0,0,0:0,-4.51545,-52.1765,-4.51545,-52.1765,-52.1765,-4.51545,-52.1765,-52.1765,-52.1765 0|0:18:13,0,0,4:13:506:0,0,4:0,0,157:-8.99284,-12.9062,-54.4888,-12.9062,-54.4888,-54.4888,0,-41.5761,-41.5761,-40.3719 0|0:21:8,2,0,11:8:309:2,0,11:72,0,434:-33.3261,-29.8661,-54.6369,-35.7343,-55.239,-61.1095,0,-19.529,-25.3972,-22.0859 0|0:4:0,0,0,4:0:0:0,0,4:0,0,154:-14.2303,-14.2303,-14.2303,-14.2303,-14.2303,-14.2303,-1.20412,-1.20412,-1.20412,0 0|1:13:11,0,2,0:11:433:0,2,0:0,82,0:-3.86629,-7.17762,-42.7848,0,-36.0141,-35.412,-7.17762,-42.7848,-36.0141,-42.7848 0|1:19:17,0,2,0:17:658:0,2,0:0,76,0:-1.49469,-6.6122,-60.6671,0,-54.4354,-53.8333,-6.6122,-60.6671,-54.4354,-60.6671 dDocent_Contig_12646 34 . A G 1512.44 . AB=0.468468;ABP=3.96888;AC=2;AF=0.166667;AN=12;AO=52;CIGAR=3M1X1M;DP=228;DPB=226.8;DPRA=1.89744;EPP=115.927;EPPR=365.646;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.994012;PAO=0;PQA=0;PQR=0;PRO=0;QA=2062;QR=6513;RO=167;RPL=0;RPP=115.927;RPPR=365.646;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=167;SRP=365.646;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:18:18,0,0:18:706:0,0:0,0:0,-5.41854,-63.8709,-5.41854,-63.8709,-63.8709 0|0:29:29,0,0:29:1130:0,0:0,0:0,-8.72987,-101.992,-8.72987,-101.992,-101.992 0|0:37:35,0,0:35:1365:0,0:0,0:0,-10.536,-122.859,-10.536,-122.859,-122.859 0|0:33:33,0,0:33:1289:0,0:0,0:0,-9.93399,-116.291,-9.93399,-116.291,-116.291 0|1:60:24,6,29:24:940:6,29:235,1150:-87.4327,-75.3384,-150.822,0,-57.9711,-68.5611 0|1:51:28,0,23:28:1083:0,23:0,912:-67.0332,-75.462,-164.407,0,-89.3363,-82.4126 dDocent_Contig_12649 35 . T A 41.2298 . AB=0.114286;ABP=93.4676;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=306;DPB=306;DPRA=1.48305;EPP=4.09604;EPPR=255.105;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.625;PAIREDR=0.38255;PAO=0;PQA=0;PQR=0;PRO=0;QA=293;QR=11572;RO=298;RPL=0;RPP=20.3821;RPPR=650.109;RPR=8;RUN=1;SAF=3;SAP=4.09604;SAR=5;SRF=242;SRP=255.105;SRR=56;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:50,0:50:1905:0:0:0,-15.0515,-171.662 0/1:70:62,8:62:2369:8:293:-5.64582,0,-192.311 0/0:39:39,0:39:1533:0:0:0,-11.7402,-138.2 0/0:57:57,0:57:2236:0:0:0,-17.1587,-201.418 0/0:44:44,0:44:1687:0:0:0,-13.2453,-152.056 0/0:46:46,0:46:1842:0:0:0,-13.8474,-165.985 dDocent_Contig_12652 62 . C T 603.192 . AB=0.169643;ABP=215.349;AC=3;AF=0.25;AN=12;AO=44;CIGAR=1X;DP=506;DPB=506;DPRA=0.72844;EPP=98.5551;EPPR=1006.23;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.886364;PAIREDR=0.926407;PAO=0;PQA=0;PQR=0;PRO=0;QA=1699;QR=17728;RO=462;RPL=44;RPP=98.5551;RPPR=1006.23;RPR=0;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=462;SRP=1006.23;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:66:63,3:63:2412:3:111:0,-9.51655,-206.917 0/1:51:42,9:42:1591:9:360:-17.4101,0,-128.096 0/1:82:70,12:70:2749:12:461:-17.1463,0,-222.855 0/1:91:74,17:74:2810:17:645:-30.9846,0,-225.647 0/0:107:104,3:104:3956:3:122:0,-20.8377,-344.711 0/0:109:109,0:109:4210:0:0:0,-32.8123,-378.928 dDocent_Contig_12653 12 . T A 839.84 . AB=0.195556;ABP=184.15;AC=4;AF=0.333333;AN=12;AO=48;CIGAR=1X;DP=280;DPB=280;DPRA=27.8;EPP=107.241;EPPR=506.792;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.969828;PAO=0;PQA=0;PQR=0;PRO=0;QA=1906;QR=9272;RO=232;RPL=0;RPP=107.241;RPPR=506.792;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=232;SRP=506.792;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:58:41,17:41:1639:17:689:-44.8792,0,-130.28 0/1:87:70,17:70:2780:17:669:-34.3477,0,-224.124 0/0:53:49,4:49:1961:4:156:0,-1.53964,-162.273 0/1:75:66,9:66:2648:9:351:-9.37113,0,-215.862 0/1:5:4,1:4:163:1:41:-2.58942,0,-13.5533 0/0:2:2,0:2:81:0:0:0,-0.60206,-7.68573 dDocent_Contig_12655 66 . G A 1079.63 . AB=0.242424;ABP=98.0945;AC=4;AF=0.4;AN=10;AO=49;CIGAR=1X;DP=291;DPB=291;DPRA=0;EPP=109.412;EPPR=528.507;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1863;QR=9111;RO=242;RPL=49;RPP=109.412;RPPR=528.507;RPR=0;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=242;SRP=528.507;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:6:0,6:0:0:6:226:-20.7013,-1.80618,0 0/0:28:27,1:27:990:1:6:0,-7.82884,-88.7981 0/1:33:29,4:29:1091:4:162:-5.03297,0,-88.5564 ./.:.:.:.:.:.:.:. 0/1:132:96,36:96:3626:36:1389:-85.5294,0,-286.716 0/0:92:90,2:90:3404:2:80:0,-20.103,-298.9 dDocent_Contig_12656 87 . C T 2656.39 . AB=0.334311;ABP=84.3227;AC=2;AF=0.2;AN=10;AO=114;CIGAR=1X;DP=535;DPB=535;DPRA=2.6366;EPP=250.558;EPPR=917.2;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4123;QR=15440;RO=421;RPL=114;RPP=250.558;RPPR=917.2;RPR=0;RUN=1;SAF=114;SAP=250.558;SAR=0;SRF=421;SRP=917.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:204:170,34:170:6201:34:1233:-49.8629,0,-496.735 0/1:137:57,80:57:2082:80:2890:-219.077,0,-146.401 0/0:83:83,0:83:3172:0:0:0,-24.9855,-285.627 0/0:107:107,0:107:3841:0:0:0,-32.2102,-345.859 ./.:.:.:.:.:.:.:. 0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3134 dDocent_Contig_12657 178 . G A 1124.22 . AB=0;ABP=0;AC=4;AF=0.333333;AN=12;AO=31;CIGAR=1X;DP=186;DPB=186;DPRA=0.4;EPP=70.3259;EPPR=339.589;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1233;QR=5996;RO=155;RPL=31;RPP=70.3259;RPPR=339.589;RPR=0;RUN=1;SAF=0;SAP=70.3259;SAR=31;SRF=0;SRP=339.589;SRR=155;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:1002:0:0:0,-7.82678,-90.4639 0/0:47:47,0:47:1816:0:0:0,-14.1484,-163.661 0/0:19:19,0:19:739:0:0:0,-5.71957,-66.8322 0/0:63:63,0:63:2439:0:0:0,-18.9649,-219.678 1/1:14:0,14:0:0:14:560:-50.7423,-4.21442,0 1/1:17:0,17:0:0:17:673:-60.9011,-5.11751,0 dDocent_Contig_12658 32 . C A 438.264 . AB=0.147887;ABP=308.851;AC=5;AF=0.416667;AN=12;AO=42;CIGAR=1X;DP=318;DPB=318;DPRA=1.67059;EPP=6.31921;EPPR=31.3339;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.714286;PAIREDR=0.594203;PAO=0;PQA=0;PQR=0;PRO=0;QA=1520;QR=10311;RO=276;RPL=0;RPP=94.2121;RPPR=602.337;RPR=42;RUN=1;SAF=25;SAP=6.31921;SAR=17;SRF=168;SRP=31.3339;SRR=108;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:55:49,6:49:1842:6:213:-2.95211,0,-149.456 0/1:69:54,15:54:2031:15:546:-28.697,0,-162.239 0/0:34:34,0:34:1264:0:0:0,-10.235,-114.041 0/1:40:34,6:34:1258:6:227:-8.7459,0,-101.462 0/1:69:59,10:59:2213:10:338:-9.9694,0,-178.604 0/1:51:46,5:46:1703:5:196:-2.66052,0,-138.162 dDocent_Contig_12659 1 . N G 76.8682 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12660 129 . C T 95.0686 . AB=0.132075;ABP=127.645;AC=5;AF=0.416667;AN=12;AO=14;CIGAR=4M1X3M;DP=106;DPB=106.5;DPRA=0;EPP=33.4109;EPPR=191.928;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.857143;PAIREDR=0.977011;PAO=0;PQA=0;PQR=0;PRO=0;QA=508;QR=3156;RO=87;RPL=0;RPP=33.4109;RPPR=191.928;RPR=14;RUN=1;SAF=0;SAP=33.4109;SAR=14;SRF=0;SRP=191.928;SRR=87;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:27:23,0,4:23:847:0,4:0,142:-5.00066,-11.9244,-81.1983,0,-69.6307,-68.4266 0|1:11:10,0,1:10:360:0,1:0,37:-0.386499,-3.3968,-32.7606,0,-29.7327,-29.4317 0|1:13:10,0,3:10:368:0,3:0,107:-6.06842,-9.07872,-39.1784,0,-30.4588,-29.5557 0|0:38:30,4,3:30:1073:4,3:125,111:-1.01826,0,-86.3415,-0.927633,-78.4626,-87.5946 0|1:15:13,0,2:13:476:0,2:0,74:-2.51043,-6.42382,-45.3235,0,-39.2689,-38.6669 0|1:2:1,0,1:1:32:0,1:0,37:-3.09577,-3.3968,-5.95022,0,-2.89828,-2.59725 dDocent_Contig_12661 9 . T C 970.767 . AB=0.160194;ABP=416.223;AC=3;AF=0.25;AN=12;AO=87;CIGAR=1X;DP=1017;DPB=1017;DPRA=0;EPP=191.928;EPPR=2022.48;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.977011;PAIREDR=0.998925;PAO=0;PQA=0;PQR=0;PRO=0;QA=3310;QR=35595;RO=930;RPL=0;RPP=191.928;RPPR=2022.48;RPR=87;RUN=1;SAF=87;SAP=191.928;SAR=0;SRF=930;SRP=2022.48;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:140:122,18:122:4663:18:674:-18.8465,0,-377.568 0/0:168:157,11:157:5976:11:419:0,-12.5116,-499.731 0/1:72:50,22:50:1926:22:847:-54.8784,0,-151.906 0/1:200:174,26:174:6635:26:983:-28.5737,0,-536.853 0/0:216:207,9:207:7956:9:349:0,-33.2517,-684.066 0/0:221:220,1:220:8439:1:38:0,-62.7304,-755.484 dDocent_Contig_12662 28 . T A 359.036 . AB=0;ABP=0;AC=6;AF=0.5;AN=12;AO=1;CIGAR=2X1M1X6M;DP=110;DPB=109.9;DPRA=0.705882;EPP=5.18177;EPPR=0;GTI=0;LEN=1;MEANALT=3;MQM=30;MQMR=0;NS=6;NUMALT=7;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=30;QR=0;RO=0;RPL=0;RPP=5.18177;RPPR=0;RPR=1;RUN=1;SAF=1;SAP=5.18177;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:5:0,0,0,0,0,0,5,0:0:0:0,0,0,0,0,5,0:0,0,0,0,0,30,0:-1.64338,-1.64338,-1.64338,-1.64338,-1.64338,-1.64338,-1.64338,-1.64338,-1.64338,-1.64338,-1.64338,-1.64338,-1.64338,-1.64338,-1.64338,-1.64338,-1.64338,-1.64338,-1.64338,-1.64338,-1.64338,-1.50515,-1.50515,-1.50515,-1.50515,-1.50515,-1.50515,0,-1.64338,-1.64338,-1.64338,-1.64338,-1.64338,-1.64338,-1.50515,-1.64338 1|1:34:0,0,0,0,0,11,23,0:0:0:0,0,0,0,11,23,0:0,0,0,0,77,144,0:-7.89102,-7.89102,-7.89102,-7.89102,-7.89102,-7.89102,-7.89102,-7.89102,-7.89102,-7.89102,-7.89102,-7.89102,-7.89102,-7.89102,-7.89102,-6.79863,-6.79863,-6.79863,-6.79863,-6.79863,-3.4873,-6.92369,-6.92369,-6.92369,-6.92369,-6.92369,-5.78889,0,-7.89102,-7.89102,-7.89102,-7.89102,-7.89102,-6.79863,-6.92369,-7.89102 0|0:15:0,0,0,0,0,9,5,1:0:0:0,0,0,0,9,5,1:0,0,0,0,63,42,30:-3.57174,-3.57174,-3.57174,-3.57174,-3.57174,-3.57174,-3.57174,-3.57174,-3.57174,-3.57174,-3.57174,-3.57174,-3.57174,-3.57174,-3.57174,-2.70927,-2.70927,-2.70927,-2.70927,-2.70927,0,-2.44137,-2.44137,-2.44137,-2.44137,-2.44137,-1.75219,-0.936222,-1.42881,-1.42881,-1.42881,-1.42881,-1.42881,-0.545817,-0.290588,-1.12778 1|1:21:0,0,0,0,0,0,20,0:0:0:0,0,0,0,0,20,0:0,0,0,0,0,120,0:-6.26467,-6.26467,-6.26467,-6.26467,-6.26467,-6.26467,-6.26467,-6.26467,-6.26467,-6.26467,-6.26467,-6.26467,-6.26467,-6.26467,-6.26467,-6.26467,-6.26467,-6.26467,-6.26467,-6.26467,-6.26467,-6.0206,-6.0206,-6.0206,-6.0206,-6.0206,-6.0206,0,-6.26467,-6.26467,-6.26467,-6.26467,-6.26467,-6.26467,-6.0206,-6.26467 0|0:10:0,3,0,1,1,5,0,0:0:0:3,0,1,1,5,0,0:90,0,18,6,35,0,0:-7.51467,-1.06647,-0.163382,-7.51467,-1.06647,-7.51467,-6.46035,0,-6.46035,-6.15932,-7.50373,-1.04974,-7.50373,-6.45022,-7.2027,-7.0964,-0.605522,-7.0964,-6.05747,-7.11675,-5.59125,-7.51467,-1.06647,-7.51467,-6.46035,-7.50373,-7.0964,-7.51467,-7.51467,-1.06647,-7.51467,-6.46035,-7.50373,-7.0964,-7.51467,-7.51467 0|0:25:0,0,3,0,0,21,0,0:0:0:0,3,0,0,21,0,0:0,117,0,0,147,0,0:-8.37636,-8.37636,-8.37636,-6.84497,-6.84497,-5.94188,-8.37636,-8.37636,-6.84497,-8.37636,-8.37636,-8.37636,-6.84497,-8.37636,-8.37636,-6.32163,-6.32163,-4.75507,-6.32163,-6.32163,0,-8.37636,-8.37636,-6.84497,-8.37636,-8.37636,-6.32163,-8.37636,-8.37636,-8.37636,-6.84497,-8.37636,-8.37636,-6.32163,-8.37636,-8.37636 dDocent_Contig_12663 12 . C T 288.411 . AB=0.157025;ABP=126.641;AC=2;AF=0.166667;AN=12;AO=19;CIGAR=1X;DP=356;DPB=356;DPRA=1.02979;EPP=44.2683;EPPR=734.797;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.368421;PAIREDR=0.465875;PAO=0;PQA=0;PQR=0;PRO=0;QA=753;QR=13401;RO=337;RPL=0;RPP=44.2683;RPPR=734.797;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=337;SRP=734.797;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:58:58,0:58:2256:0:0:0,-17.4597,-203.223 0/0:64:64,0:64:2542:0:0:0,-19.2659,-228.925 0/0:44:44,0:44:1764:0:0:0,-13.2453,-158.979 0/0:69:69,0:69:2768:0:0:0,-20.7711,-249.231 0/1:41:31,10:31:1234:10:403:-24.2882,0,-98.9909 0/1:80:71,9:71:2837:9:350:-7.77477,0,-231.355 dDocent_Contig_12664 23 . G A 40.6579 . AB=0.0649351;ABP=129.604;AC=0;AF=0;AN=12;AO=10;CIGAR=2M1X6M;DP=391;DPB=400.333;DPRA=1.35542;EPP=24.725;EPPR=795.598;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=0.8;PAIREDR=0.706849;PAO=0;PQA=0;PQR=0;PRO=0;QA=404;QR=14365;RO=365;RPL=0;RPP=24.725;RPPR=795.598;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=365;SRP=795.598;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:65:64,1,0:64:2520:1,0:40,0:0,-15.5713,-222.969,-19.2659,-223.27,-226.565 0|0:70:66,0,3:66:2602:0,3:0,122:0,-19.868,-234.008,-9.56762,-223.944,-223.041 0|0:77:63,8,5:63:2490:8,5:300,204:-5.58864,0,-202.489,-7.7118,-188.065,-211.13 0|0:78:73,3,2:73:2854:3,2:118,78:0,-12.2665,-246,-15.5649,-240.492,-249.596 0|0:40:39,0,0:39:1532:0,0:0,0:0,-11.7402,-137.73,-11.7402,-137.73,-137.73 0|0:61:60,0,0:60:2367:0,0:0,0:0,-18.0618,-213.047,-18.0618,-213.047,-213.047 dDocent_Contig_12665 15 . C T 178.559 . AB=0.180328;ABP=57.1547;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=115;DPB=115;DPRA=2.25926;EPP=26.8965;EPPR=220.241;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.980769;PAO=0;PQA=0;PQR=0;PRO=0;QA=430;QR=4130;RO=104;RPL=0;RPP=26.8965;RPPR=228.843;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=103;SRP=220.241;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:750:0:0:0,-5.71957,-67.8126 0/0:14:14,0:14:536:0:0:0,-4.21442,-48.5757 0/1:29:24,5:24:956:5:196:-9.28406,0,-77.609 0/1:32:26,6:26:1044:6:234:-11.7937,0,-84.6189 0/0:6:6,0:6:243:0:0:0,-1.80618,-22.2482 0/0:15:15,0:15:601:0:0:0,-4.51545,-54.4288 dDocent_Contig_12666 76 . G A 292.57 . AB=0.173913;ABP=87.981;AC=1;AF=0.0833333;AN=12;AO=21;CIGAR=1X;DP=412;DPB=412;DPRA=1.39095;EPP=48.6112;EPPR=852.056;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.997442;PAO=0;PQA=0;PQR=0;PRO=0;QA=845;QR=15311;RO=391;RPL=21;RPP=48.6112;RPPR=852.056;RPR=0;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=391;SRP=852.056;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:38,0:38:1482:0:0:0,-11.4391,-133.629 0/0:59:59,0:59:2296:0:0:0,-17.7608,-206.81 0/0:60:60,0:60:2328:0:0:0,-18.0618,-209.679 0/0:86:86,0:86:3390:0:0:0,-25.8886,-305.162 0/0:77:72,5:72:2830:5:199:0,-4.89125,-236.528 0/1:92:76,16:76:2985:16:646:-30.7799,0,-241.036 dDocent_Contig_12667 235 . G A 36.4203 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=79;DPB=79;DPRA=0.816667;EPP=39.9253;EPPR=137.642;GTI=0;LEN=1;MEANALT=1;MQM=7;MQMR=7;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=616;QR=2499;RO=62;RPL=17;RPP=39.9253;RPPR=137.642;RPR=0;RUN=1;SAF=0;SAP=39.9253;SAR=17;SRF=0;SRP=137.642;SRR=62;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:355:0:0:0,-2.70927,-5.73728 0/0:11:9,2:9:364:2:74:0,-1.98201,-4.40938 1/1:9:2,7:2:82:7:257:-3.14775,-1.37953,0 0/0:21:21,0:21:850:0:0:0,-6.32163,-13.297 0/0:22:17,5:17:688:5:185:0,-3.40428,-7.55912 0/0:7:4,3:4:160:3:100:0,-0.151174,-0.633259 dDocent_Contig_12668 25 . T G 73.5603 . AB=0.142857;ABP=49.5419;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=262;DPB=262;DPRA=2.18182;EPP=33.4109;EPPR=541.535;GTI=0;LEN=1;MEANALT=1;MQM=51.8571;MQMR=58.8387;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.766129;PAO=0;PQA=0;PQR=0;PRO=0;QA=561;QR=9895;RO=248;RPL=0;RPP=33.4109;RPPR=541.535;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=248;SRP=541.535;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:873:0:0:0,-6.62266,-78.871 0/1:42:36,6:36:1423:6:236:-8.87891,0,-114.926 0/0:32:31,1:31:1237:1:40:0,-5.64154,-107.487 0/0:73:71,2:71:2836:2:81:0,-14.4159,-247.365 0/0:27:26,1:26:1043:1:41:0,-4.10681,-90.0872 0/0:66:62,4:62:2483:4:163:0,-5.06881,-207.232 dDocent_Contig_12669 34 . G A 1613.64 . AB=0.344262;ABP=41.5628;AC=6;AF=0.5;AN=12;AO=63;CIGAR=1X;DP=183;DPB=183;DPRA=0;EPP=139.813;EPPR=263.587;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.888889;PAIREDR=0.966667;PAO=0;PQA=0;PQR=0;PRO=0;QA=2506;QR=4824;RO=120;RPL=0;RPP=139.813;RPPR=263.587;RPR=63;RUN=1;SAF=63;SAP=139.813;SAR=0;SRF=120;SRP=263.587;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:27:18,9:18:718:9:354:-24.0905,0,-56.8166 0/1:39:28,11:28:1127:11:444:-28.5751,0,-89.9719 0/1:31:25,6:25:1006:6:234:-12.0988,0,-81.5047 0/1:35:26,9:26:1046:9:359:-22.1368,0,-83.8959 0/1:21:10,11:10:406:11:437:-33.3635,0,-30.5784 0/1:30:13,17:13:521:17:678:-52.3207,0,-38.2054 dDocent_Contig_12670 110 . T A 1901.73 . AB=0.29595;ABP=119.1;AC=2;AF=0.2;AN=10;AO=95;CIGAR=1X;DP=526;DPB=526;DPRA=2.34878;EPP=209.3;EPPR=934.572;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3212;QR=14354;RO=429;RPL=0;RPP=209.3;RPPR=934.572;RPR=95;RUN=1;SAF=0;SAP=209.3;SAR=95;SRF=0;SRP=934.572;SRR=429;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:101:101,0:101:3384:0:0:0,-30.404,-304.789 0/0:70:70,0:70:2294:0:0:0,-21.0721,-206.718 0/1:129:91,37:91:3080:37:1266:-75.6328,0,-238.832 0/1:192:133,58:133:4478:58:1946:-117.842,0,-345.645 0/0:34:34,0:34:1118:0:0:0,-10.235,-100.914 ./.:.:.:.:.:.:.:. dDocent_Contig_12671 18 . T C 353.043 . AB=0.225352;ABP=49.5287;AC=1;AF=0.0833333;AN=12;AO=21;CIGAR=1X;DP=750;DPB=750;DPRA=0.622378;EPP=48.6112;EPPR=1583.84;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993132;PAO=0;PQA=0;PQR=0;PRO=0;QA=846;QR=28894;RO=728;RPL=0;RPP=48.6112;RPPR=1583.84;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=728;SRP=1583.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:144:144,0:144:5684:0:0:0,-43.3483,-511.385 0/0:110:110,0:110:4310:0:0:0,-33.1133,-387.875 0/0:138:137,0:137:5502:0:0:0,-41.2411,-494.883 0/0:180:180,0:180:7196:0:0:0,-54.1854,-647.306 0/0:107:102,5:102:4048:5:203:0,-13.5572,-345.657 0/1:71:55,16:55:2154:16:643:-36.8272,0,-172.667 dDocent_Contig_12672 12 . T C 10834 . AB=0.232547;ABP=1266.76;AC=5;AF=0.416667;AN=12;AO=489;CIGAR=1X;DP=2246;DPB=2246;DPRA=0;EPP=1064.86;EPPR=3621.13;GTI=0;LEN=1;MEANALT=1;MQM=59.7157;MQMR=59.2954;NS=6;NUMALT=1;ODDS=0;PAIRED=0.91411;PAIREDR=0.537279;PAO=0;PQA=0;PQR=0;PRO=0;QA=19651;QR=69607;RO=1757;RPL=0;RPP=1064.86;RPPR=3818.29;RPR=489;RUN=1;SAF=489;SAP=1064.86;SAR=0;SRF=1734;SRP=3621.13;SRR=23;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:212:196,16:196:7786:16:635:0,-6.3343,-632.412 0/1:223:148,75:148:5869:75:2981:-201.245,0,-451.907 0/1:194:151,43:151:5966:43:1724:-96.979,0,-476.357 0/1:397:265,132:265:10456:132:5326:-359.662,0,-817.189 0/1:622:498,124:498:19770:124:5000:-262.619,0,-1565.9 0/1:598:499,99:499:19760:99:3985:-172.114,0,-1596.02 dDocent_Contig_12673 60 . T A 216.92 . AB=0.214286;ABP=42.7172;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X1M1X16M;DP=143;DPB=143.474;DPRA=1.64706;EPP=29.068;EPPR=261.416;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.957983;PAO=0;PQA=0;PQR=0;PRO=0;QA=438;QR=4345;RO=119;RPL=12;RPP=29.068;RPPR=261.416;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=119;SRP=261.416;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:16:13,0,2:13:467:0,2:0,79:-2.73027,-6.64366,-44.7674,0,-38.2608,-37.6587 0|0:17:17,0,0:17:602:0,0:0,0:0,-5.11751,-54.5079,-5.11751,-54.5079,-54.5079 0|0:37:32,0,3:32:1175:0,3:0,118:-0.189001,-9.82196,-105.917,0,-96.2078,-95.3048 0|0:17:17,0,0:17:625:0,0:0,0:0,-5.11751,-56.584,-5.11751,-56.584,-56.584 0|1:17:9,8,0:9:338:8,0:287,0:-21.0453,0,-25.6576,-23.7545,-28.0658,-51.454 0|1:39:31,4,1:31:1138:4,1:151,36:-3.11873,0,-91.9482,-9.50502,-90.2147,-102.292 dDocent_Contig_12674 7 . A C 2961.44 . AB=0.155172;ABP=62.913;AC=0;AF=0;AN=12;AO=10;CIGAR=1X2M1X;DP=382;DPB=382;DPRA=1.24138;EPP=24.725;EPPR=563.25;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=384;QR=9839;RO=258;RPL=0;RPP=24.725;RPPR=563.25;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=258;SRP=563.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:29:2,0,27:2:78:0,27:0,1089:-90.8907,-91.4928,-97.9036,-1.3264,-8.12781,0 0|0:165:132,0,32:132:5023:0,32:0,1289:-66.5316,-106.268,-518.24,0,-412,-402.367 0|0:67:35,0,32:35:1332:0,32:0,1276:-94.932,-105.468,-214.709,0,-109.63,-99.9975 0|0:49:41,0,8:41:1575:0,8:0,326:-14.9594,-27.3016,-156.576,0,-129.677,-127.269 0|0:14:13,1,0:13:485:1,0:39,0:0,-0.317855,-40.0962,-3.91339,-40.3972,-43.6043 0|0:58:35,9,14:35:1346:9,14:345,565:-36.0513,-18.2789,-126.062,0,-82.1911,-106.293 dDocent_Contig_12675 16 . T C 3814.27 . AB=0.561947;ABP=10.5432;AC=6;AF=0.5;AN=12;AO=127;CIGAR=1X;DP=226;DPB=226;DPRA=0;EPP=278.787;EPPR=217.986;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.590551;PAIREDR=0.707071;PAO=0;PQA=0;PQR=0;PRO=0;QA=5098;QR=3974;RO=99;RPL=0;RPP=278.787;RPPR=217.986;RPR=127;RUN=1;SAF=127;SAP=278.787;SAR=0;SRF=99;SRP=217.986;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:18,7:18:716:7:287:-18.6795,0,-57.2374 0/1:43:20,23:20:810:23:909:-69.1661,0,-60.2693 0/1:32:6,26:6:246:26:1027:-83.0855,0,-12.8872 0/1:48:21,27:21:849:27:1094:-84.2939,0,-62.2714 0/1:37:17,20:17:687:20:812:-62.2565,0,-51.0216 0/1:41:17,24:17:666:24:969:-75.1669,0,-47.9183 dDocent_Contig_12676 129 . A T 3829.87 . AB=0.577689;ABP=16.1689;AC=4;AF=0.5;AN=8;AO=145;CIGAR=1X;DP=251;DPB=251;DPRA=0;EPP=317.874;EPPR=233.186;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5164;QR=3957;RO=106;RPL=0;RPP=317.874;RPPR=233.186;RPR=145;RUN=1;SAF=0;SAP=317.874;SAR=145;SRF=0;SRP=233.186;SRR=106;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:64:26,38:26:1004:38:1338:-101.445,0,-71.4052 0/1:62:34,28:34:1255:28:1006:-72.187,0,-94.5716 0/1:56:18,38:18:670:38:1387:-108.27,0,-43.7689 0/1:69:28,41:28:1028:41:1433:-108.484,0,-72.0425 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12677 124 . N G 36.0308 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=10X1M1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=19;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=78;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:2:0,2:0:0:2:78:-3.60189,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_12678 12 . G A 297.191 . AB=0.177083;ABP=89.9597;AC=2;AF=0.166667;AN=12;AO=18;CIGAR=1X;DP=518;DPB=518;DPRA=0.732441;EPP=42.0968;EPPR=1088.75;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.982;PAO=0;PQA=0;PQR=0;PRO=0;QA=720;QR=19670;RO=500;RPL=0;RPP=42.0968;RPPR=1088.75;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=500;SRP=1088.75;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:71:71,0:71:2792:0:0:0,-21.3731,-251.405 0/0:139:139,0:139:5427:0:0:0,-41.8432,-488.308 0/0:123:122,1:122:4831:1:41:0,-32.9321,-430.623 0/0:89:89,0:89:3497:0:0:0,-26.7917,-314.789 0/1:41:31,10:31:1241:10:399:-23.926,0,-99.6176 0/1:55:48,7:48:1882:7:280:-9.01491,0,-153.031 dDocent_Contig_12679 30 . C T 30.5829 . AB=0.116279;ABP=58.0041;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=283;DPB=283;DPRA=0.743333;EPP=33.4109;EPPR=587.136;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.285714;PAIREDR=0.579926;PAO=0;PQA=0;PQR=0;PRO=0;QA=561;QR=10774;RO=269;RPL=0;RPP=33.4109;RPPR=587.136;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=269;SRP=587.136;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:55:52,3:52:2078:3:119:0,-5.46164,-176.11 0/0:60:60,0:60:2429:0:0:0,-18.0618,-218.747 0/1:23:20,3:20:796:3:123:-4.5411,0,-65.0336 0/0:83:79,4:79:3169:4:158:0,-10.3868,-270.676 0/1:20:18,2:18:686:2:82:-1.75908,0,-56.0361 0/0:42:40,2:40:1616:2:79:0,-5.14602,-138.172 dDocent_Contig_12682 18 . C T 33.5254 . AB=0.125;ABP=51.8684;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=156;DPB=156;DPRA=1.72414;EPP=13.8677;EPPR=330.903;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.463576;PAO=0;PQA=0;PQR=0;PRO=0;QA=184;QR=6018;RO=151;RPL=0;RPP=13.8677;RPPR=330.903;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=151;SRP=330.903;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:11:11,0:11:447:0:0:0,-3.31133,-40.5861 0/0:46:46,0:46:1828:0:0:0,-13.8474,-164.742 0/0:20:20,0:20:799:0:0:0,-6.0206,-72.2302 0/0:22:22,0:22:884:0:0:0,-6.62266,-79.8701 0/0:17:17,0:17:685:0:0:0,-5.11751,-61.9802 0/1:40:35,5:35:1375:5:184:-4.87523,0,-111.97 dDocent_Contig_12683 13 . C T 396.489 . AB=0.133333;ABP=38.0434;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X3M1X;DP=104;DPB=104;DPRA=2.5;EPP=11.6962;EPPR=176.728;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=157;QR=3128;RO=80;RPL=0;RPP=11.6962;RPPR=176.728;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=80;SRP=176.728;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:17:11,0,6:11:425:0,6:0,232:-16.1276,-19.439,-54.3436,0,-35.2909,-33.4847 0|0:15:11,0,4:11:432:0,4:0,155:-9.80982,-13.1212,-48.6566,0,-35.924,-34.7199 0|0:14:11,0,3:11:430:0,3:0,121:-7.06578,-10.3771,-45.7186,0,-35.7418,-34.8387 0|0:16:12,0,4:12:471:0,4:0,159:-9.87564,-13.488,-52.2216,0,-39.1295,-37.9254 0|1:30:23,4,3:23:896:4,3:157,116:-5.99187,0,-72.4398,-3.38994,-64.1161,-76.1257 0|0:12:12,0,0:12:474:0,0:0,0:0,-3.61236,-43.0126,-3.61236,-43.0126,-43.0126 dDocent_Contig_12684 17 . G A 1876.23 . AB=0.285714;ABP=111.894;AC=4;AF=0.333333;AN=12;AO=82;CIGAR=2X;DP=453;DPB=453;DPRA=0;EPP=181.071;EPPR=808.627;GTI=0;LEN=1;MEANALT=1;MQM=58.7805;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.914634;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3230;QR=14763;RO=371;RPL=0;RPP=181.071;RPPR=808.627;RPR=82;RUN=1;SAF=82;SAP=181.071;SAR=0;SRF=371;SRP=808.627;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:129:105,24:105:4178:24:918:-44.0882,0,-337.157 0|1:82:69,13:69:2739:13:512:-21.6886,0,-221.948 0|1:12:4,8:4:163:8:322:-25.7362,0,-11.4461 0|1:50:17,33:17:677:33:1318:-103.332,0,-46.2085 0|0:60:59,1:59:2372:1:39:0,-14.2133,-209.779 0|0:120:117,3:117:4634:3:121:0,-25.0233,-405.894 dDocent_Contig_12685 23 . G T 129.459 . AB=0.122807;ABP=73.4498;AC=4;AF=0.4;AN=10;AO=11;CIGAR=1X;DP=190;DPB=190;DPRA=0.260753;EPP=26.8965;EPPR=391.704;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=439;QR=7100;RO=179;RPL=0;RPP=26.8965;RPPR=391.704;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=179;SRP=391.704;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:93:93,0:93:3699:0:0:0,-27.9958,-332.927 0/1:29:26,3:26:1016:3:121:-2.55012,0,-83.0005 0/1:28:24,4:24:951:4:156:-5.98709,0,-77.4583 0/0:38:36,2:36:1434:2:81:0,-3.75341,-121.628 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_12686 122 . T G 5288.2 . AB=0.510638;ABP=3.24131;AC=7;AF=0.583333;AN=12;AO=207;CIGAR=1X;DP=402;DPB=402;DPRA=0;EPP=452.505;EPPR=426.447;GTI=0;LEN=1;MEANALT=1;MQM=56.1063;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.231884;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6997;QR=6376;RO=195;RPL=0;RPP=452.505;RPPR=426.447;RPR=207;RUN=1;SAF=0;SAP=452.505;SAR=207;SRF=0;SRP=426.447;SRR=195;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:63:43,20:43:1400:20:684:-42.9076,0,-107.32 0/0:82:77,5:77:2551:5:173:0,-8.7743,-213.934 0/1:18:14,4:14:450:4:138:-7.33917,0,-35.3902 0/1:154:58,96:58:1874:96:3217:-242.814,0,-122.57 1/1:7:0,7:0:0:7:243:-22.2088,-2.10721,0 1/1:78:3,75:3:101:75:2542:-218.772,-14.0567,0 dDocent_Contig_12687 70 . T C 279.845 . AB=0.228571;ABP=47.8047;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=176;DPB=176;DPRA=1.32075;EPP=37.7539;EPPR=350.446;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=573;QR=5558;RO=160;RPL=16;RPP=37.7539;RPPR=350.446;RPR=0;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=160;SRP=350.446;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:37,0:37:1271:0:0:0,-11.1381,-114.688 0/0:19:19,0:19:657:0:0:0,-5.71957,-59.4512 0/0:6:6,0:6:208:0:0:0,-1.80618,-19.0594 0/1:45:32,13:32:1121:13:462:-28.3675,0,-87.6493 0/0:44:44,0:44:1550:0:0:0,-13.2453,-139.789 0/1:25:22,3:22:751:3:111:-2.82817,0,-60.378 dDocent_Contig_12688 22 . G A 6414.94 . AB=0.135135;ABP=302.497;AC=2;AF=0.166667;AN=12;AO=35;CIGAR=2X;DP=303;DPB=303;DPRA=0;EPP=79.0118;EPPR=133.299;GTI=0;LEN=1;MEANALT=2.6;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1369;QR=2312;RO=60;RPL=0;RPP=79.0118;RPPR=133.299;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=60;SRP=133.299;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:51:2,7,42,0:2:67:7,42,0:282,1662,0:-154.045,-131.403,-134.719,-17.8847,0,-10.6526,-154.647,-136.826,-23.2959,-160.071 0|0:44:19,0,20,5:19:741:0,20,5:0,791,200:-59.3673,-65.0868,-125.988,0,-60.8958,-54.8752,-48.6111,-109.512,-44.4189,-108.007 1|0:60:0,5,53,2:0:0:5,53,2:196,2125,77:-191.204,-175.086,-173.581,-16.1233,0,-0.16867,-184.883,-168.765,-9.80376,-184.281 0|0:49:13,1,31,4:13:491:1,31,4:40,1209,145:-95.4621,-96.0801,-136.008,0,-36.9405,-30.9051,-87.5457,-124.478,-28.4078,-126.569 0|0:67:14,14,39,0:14:549:14,39,0:542,1559,0:-124.205,-83.9041,-124.835,0,-0.633941,-33.4095,-128.419,-129.049,-45.1497,-173.565 0|0:32:12,8,9,3:12:464:8,9,3:309,366,121:-26.5844,-4.82892,-40.5193,0,-12.7316,-35.3967,-20.2216,-32.9523,-28.1295,-57.4224 dDocent_Contig_12689 9 . G T 1326.91 . AB=0.248031;ABP=143.079;AC=6;AF=0.5;AN=12;AO=63;CIGAR=1X;DP=254;DPB=254;DPRA=0;EPP=139.813;EPPR=417.762;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.634921;PAIREDR=0.717277;PAO=0;PQA=0;PQR=0;PRO=0;QA=2425;QR=7316;RO=191;RPL=0;RPP=139.813;RPPR=417.762;RPR=63;RUN=1;SAF=63;SAP=139.813;SAR=0;SRF=191;SRP=417.762;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:26,9:26:995:9:336:-20.055,0,-79.3254 0/1:39:34,5:34:1311:5:192:-5.90984,0,-106.536 0/1:28:23,5:23:842:5:195:-9.49536,0,-67.6603 0/1:59:42,17:42:1608:17:663:-42.2463,0,-127.225 0/1:41:28,13:28:1086:13:501:-33.0958,0,-85.7024 0/1:52:38,14:38:1474:14:538:-33.1107,0,-117.281 dDocent_Contig_12690 18 . C A 68.6287 . AB=0.333333;ABP=5.18177;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=143;DPB=143;DPRA=0.335821;EPP=9.52472;EPPR=304.845;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.784173;PAO=0;PQA=0;PQR=0;PRO=0;QA=119;QR=5455;RO=139;RPL=0;RPP=9.52472;RPPR=304.845;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=139;SRP=304.845;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:640:0:0:0,-4.81648,-57.9351 0/0:47:46,0:46:1833:0:0:0,-13.8474,-164.797 0/0:27:27,0:27:1074:0:0:0,-8.12781,-96.9453 0/0:24:24,0:24:900:0:0:0,-7.22472,-81.2969 0/1:9:6,3:6:220:3:119:-8.38574,0,-17.4353 0/0:20:20,0:20:788:0:0:0,-6.0206,-71.239 dDocent_Contig_12691 42 . C A 1989.23 . AB=0.557377;ABP=6.49889;AC=4;AF=0.333333;AN=12;AO=68;CIGAR=1X;DP=132;DPB=132;DPRA=6.1;EPP=150.67;EPPR=141.985;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.941176;PAIREDR=0.96875;PAO=0;PQA=0;PQR=0;PRO=0;QA=2682;QR=2541;RO=64;RPL=0;RPP=150.67;RPPR=141.985;RPR=68;RUN=1;SAF=68;SAP=150.67;SAR=0;SRF=64;SRP=141.985;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:6:6,0:6:239:0:0:0,-1.80618,-21.8832 0/0:4:4,0:4:134:0:0:0,-1.20412,-12.382 0/1:7:6,1:6:242:1:40:-1.88847,0,-20.0501 0/1:16:8,8:8:320:8:318:-24.1703,0,-24.3506 0/1:32:10,22:10:404:22:871:-69.0687,0,-27.0871 0/1:67:30,37:30:1202:37:1453:-110.853,0,-88.2851 dDocent_Contig_12694 43 . G T 182.187 . AB=0.14;ABP=115.579;AC=1;AF=0.0833333;AN=12;AO=21;CIGAR=1X;DP=484;DPB=484;DPRA=1.53285;EPP=48.6112;EPPR=999.735;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=824;QR=17653;RO=463;RPL=0;RPP=48.6112;RPPR=999.735;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=463;SRP=1008.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:36,0:36:1371:0:0:0,-10.8371,-123.669 0/1:100:86,14:86:3300:14:550:-19.7416,0,-267.023 0/0:110:103,7:103:3928:7:274:0,-8.0866,-328.574 0/0:83:83,0:83:3116:0:0:0,-24.9855,-280.59 0/0:94:94,0:94:3644:0:0:0,-28.2968,-328.053 0/0:61:61,0:61:2294:0:0:0,-18.3628,-206.665 dDocent_Contig_12695 20 . A C 188.012 . AB=0.177419;ABP=59.0483;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X;DP=266;DPB=266;DPRA=0.785185;EPP=50.7827;EPPR=530.678;GTI=0;LEN=1;MEANALT=1.2;MQM=55.2273;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.590909;PAIREDR=0.777778;PAO=0;PQA=0;PQR=0;PRO=0;QA=892;QR=9697;RO=243;RPL=0;RPP=50.7827;RPPR=530.678;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=243;SRP=530.678;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:12,4:12:489:4:163:-10.1174,0,-39.5446 0/0:53:49,4:49:1957:4:164:0,-1.87893,-162.252 0/0:41:38,3:38:1528:3:121:0,-1.06203,-126.479 0/0:56:51,4:51:1997:4:162:0,-2.16743,-165.142 0/0:54:54,0:54:2173:0:0:0,-16.2556,-195.74 0/1:46:39,7:39:1553:7:282:-11.9056,0,-126.157 dDocent_Contig_12696 23 . T C 21396.7 . AB=0.60166;ABP=24.6439;AC=8;AF=0.666667;AN=12;AO=621;CIGAR=1X;DP=724;DPB=724;DPRA=0;EPP=1351.49;EPPR=224.5;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.99839;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=24913;QR=4030;RO=102;RPL=0;RPP=1351.49;RPPR=224.5;RPR=621;RUN=1;SAF=621;SAP=1351.49;SAR=0;SRF=102;SRP=224.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:70:35,35:35:1396:35:1411:-106.169,0,-104.821 0/1:61:15,46:15:592:46:1846:-147.986,0,-35.2507 0/1:47:23,24:23:905:24:960:-72.5508,0,-67.6046 0/1:63:23,40:23:891:40:1601:-125.358,0,-61.5243 1/1:232:6,225:6:246:225:9036:-790.202,-47.162,0 1/1:251:0,251:0:0:251:10059:-904.626,-75.5585,0 dDocent_Contig_12697 19 . C T 80.7198 . AB=0.129032;ABP=77.1206;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=330;DPB=330;DPRA=1.15672;EPP=20.3821;EPPR=700.053;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996885;PAO=0;PQA=0;PQR=0;PRO=0;QA=310;QR=12861;RO=321;RPL=0;RPP=20.3821;RPPR=700.053;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=321;SRP=700.053;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:850:0:0:0,-6.32163,-76.8104 0/0:69:68,0:68:2709:0:0:0,-20.47,-243.683 0/0:43:43,0:43:1736:0:0:0,-12.9443,-156.451 0/0:73:73,0:73:2906:0:0:0,-21.9752,-261.644 0/1:62:54,8:54:2172:8:310:-9.59485,0,-176.987 0/0:62:62,0:62:2488:0:0:0,-18.6639,-224.057 dDocent_Contig_12698 12 . T A 270.999 . AB=0.384615;ABP=6.01695;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=79;DPB=79;DPRA=2.45283;EPP=24.725;EPPR=152.842;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.7;PAIREDR=0.710145;PAO=0;PQA=0;PQR=0;PRO=0;QA=401;QR=2765;RO=69;RPL=0;RPP=24.725;RPPR=152.842;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=69;SRP=152.842;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:6:6,0:6:244:0:0:0,-1.80618,-22.3388 0/0:20:20,0:20:803:0:0:0,-6.0206,-72.5882 0/0:6:6,0:6:242:0:0:0,-1.80618,-22.1569 0/0:7:7,0:7:281:0:0:0,-2.10721,-25.6622 0/0:14:14,0:14:555:0:0:0,-4.21442,-50.2927 0/1:26:16,10:16:640:10:401:-28.6227,0,-50.1088 dDocent_Contig_12699 18 . T C 1698.62 . AB=0.331633;ABP=51.2702;AC=4;AF=0.333333;AN=12;AO=65;CIGAR=2X;DP=206;DPB=206;DPRA=9.8;EPP=144.156;EPPR=271.101;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.964029;PAO=0;PQA=0;PQR=0;PRO=0;QA=2606;QR=5536;RO=139;RPL=0;RPP=144.156;RPPR=304.845;RPR=65;RUN=1;SAF=65;SAP=144.156;SAR=0;SRF=135;SRP=271.101;SRR=4;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:26:18,8:18:726:8:308:-20.2501,0,-57.8386 0|1:28:24,4:24:958:4:163:-6.62959,0,-78.0826 0|1:37:25,12:25:964:12:483:-32.683,0,-75.9101 0|1:105:62,41:62:2485:41:1652:-117.52,0,-192.407 0|0:9:9,0:9:366:0:0:0,-2.70927,-33.3052 0|0:1:1,0:1:37:0:0:0,-0.30103,-3.69783 dDocent_Contig_12700 98 . N C 128.376 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=10X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=132;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:62:-5.8882,-0.60206,0 1|1:2:0,2:0:0:2:70:-6.64733,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_12701 45 . C A 55.3841 . AB=0.12069;ABP=75.4926;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=1X;DP=143;DPB=143;DPRA=1.36471;EPP=18.2106;EPPR=298.331;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.992647;PAO=0;PQA=0;PQR=0;PRO=0;QA=271;QR=5415;RO=136;RPL=0;RPP=18.2106;RPPR=298.331;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=136;SRP=298.331;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:847:0:0:0,-6.32163,-76.5426 0/0:24:24,0:24:949:0:0:0,-7.22472,-85.7096 0/1:37:32,5:32:1262:5:198:-7.05836,0,-102.709 0/1:21:19,2:19:771:2:73:-0.608443,0,-63.3877 0/0:13:13,0:13:518:0:0:0,-3.91339,-46.9645 0/0:27:27,0:27:1068:0:0:0,-8.12781,-96.4078 dDocent_Contig_12702 58 . G A 1361.87 . AB=0.140575;ABP=354.227;AC=6;AF=0.5;AN=12;AO=44;CIGAR=1X2M;DP=343;DPB=343;DPRA=0;EPP=98.5551;EPPR=556.736;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.954545;PAIREDR=0.952941;PAO=0;PQA=0;PQR=0;PRO=0;QA=1728;QR=10058;RO=255;RPL=44;RPP=98.5551;RPPR=556.736;RPR=0;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=255;SRP=556.736;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:74:65,3,6:65:2534:3,6:117,241:-0.298569,-10.2523,-217.595,0,-198.639,-206.45 0|1:49:33,12,4:33:1310:12,4:449,141:-26.8432,0,-104.269,-25.308,-96.4119,-131.963 0|1:39:29,2,8:29:1167:2,8:78,311:-16.8184,-19.1364,-114.724,0,-89.7795,-93.7821 0|1:126:100,7,19:100:3930:7,19:279,764:-32.8593,-39.988,-361.097,0,-300.243,-317.499 0|1:30:13,17,0:13:518:17,0:665,0:-51.1505,0,-37.937,-55.0639,-43.0545,-97.7235 0|1:25:15,3,7:15:599:3,7:119,271:-17.7361,-12.4526,-60.8939,0,-39.5426,-47.231 dDocent_Contig_12703 9 . G T 220.295 . AB=0.215686;ABP=38.8183;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1X;DP=333;DPB=333;DPRA=1.5814;EPP=44.2683;EPPR=680.51;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99359;PAO=0;PQA=0;PQR=0;PRO=0;QA=736;QR=11907;RO=312;RPL=0;RPP=44.2683;RPPR=680.51;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=312;SRP=680.51;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:51:40,11:40:1541:11:425:-23.2514,0,-123.607 0/0:90:84,6:84:3224:6:233:0,-5.75262,-268.969 0/0:32:32,0:32:1218:0:0:0,-9.63296,-109.914 0/0:63:60,2:60:2270:2:78:0,-11.5703,-197.149 0/0:60:59,0:59:2236:0:0:0,-17.7608,-201.284 0/0:37:37,0:37:1418:0:0:0,-11.1381,-127.9 dDocent_Contig_12704 8 . T A 24557.7 . AB=0.258364;ABP=1094.4;AC=12;AF=1;AN=12;AO=556;CIGAR=1X8M;DP=2152;DPB=2152;DPRA=0;EPP=531.912;EPPR=172.385;GTI=0;LEN=1;MEANALT=17.3333;MQM=48.7428;MQMR=60;NS=6;NUMALT=7;ODDS=0;PAIRED=0.109712;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=19927;QR=3045;RO=78;RPL=0;RPP=1210.35;RPPR=172.385;RPR=556;RUN=1;SAF=462;SAP=531.912;SAR=94;SRF=78;SRP=172.385;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:434:25,0,10,17,133,51,45,131:25:982:0,10,17,133,51,45,131:0,286,655,3161,1496,1645,4688:-495.606,-503.132,-583.906,-483.109,-563.883,-560.873,-451.995,-532.77,-512.747,-527.653,-294.587,-375.361,-355.34,-324.226,-335.324,-397.295,-478.07,-458.048,-426.934,-269.535,-462.717,-371.88,-452.656,-432.633,-401.52,-244.114,-346.82,-439.11,-127.755,-208.534,-188.511,-157.395,0,-102.695,-77.2762,-169.099 1|1:570:14,0,15,29,214,80,54,119:14:548:0,15,29,214,80,54,119:0,414,1100,5146,2264,1992,4357:-640.684,-644.898,-689.96,-616.213,-661.275,-656.759,-557.687,-602.75,-574.064,-594.02,-303.941,-349.003,-320.32,-261.794,-284.583,-483.243,-528.306,-499.62,-441.094,-187.365,-504.223,-484.783,-529.845,-501.16,-442.634,-188.89,-368.19,-513.59,-295.889,-340.953,-312.267,-253.739,0,-179.295,-180.832,-305.13 1|1:365:19,5,2,14,118,41,51,95:19:749:5,2,14,118,41,51,95:197,55,524,2821,1159,1920,3325:-382.754,-380.558,-440.682,-384.667,-438.38,-445.694,-346.411,-400.125,-404.234,-403.826,-201.907,-255.621,-259.73,-221.474,-228.014,-306.914,-360.628,-364.737,-326.481,-181.987,-356.201,-234.361,-288.076,-292.185,-253.928,-109.427,-214.431,-280.639,-124.924,-178.64,-182.75,-144.492,0,-104.995,-32.4353,-157.958 1|1:425:20,0,34,17,138,58,26,106:20:766:0,34,17,138,58,26,106:0,1006,641,3309,1488,961,3957:-469.99,-476.011,-538.873,-404.909,-467.772,-457.537,-424.441,-487.304,-416.202,-482.186,-257.057,-319.919,-248.823,-268.35,-278.377,-374.461,-437.323,-366.223,-385.754,-218.384,-419.864,-397.907,-460.77,-389.668,-409.2,-241.817,-359.22,-452.943,-156.087,-218.953,-147.849,-167.381,0,-117.401,-140.846,-187.044 1|1:186:0,3,5,0,3,50,22,67:0:0:3,5,0,3,50,22,67:119,167,0,63,1316,809,2367:-279.331,-274.581,-273.678,-267.16,-262.41,-265.655,-279.331,-274.581,-267.16,-279.331,-275.374,-270.624,-263.203,-275.374,-274.471,-188.198,-183.45,-176.028,-188.198,-184.243,-173.147,-214.232,-209.482,-202.061,-214.232,-210.275,-123.1,-207.609,-91.1289,-86.3794,-78.9567,-91.1289,-87.1725,0,-26.0183,-70.9599 1|1:172:0,11,15,0,0,57,28,38:0:0:11,15,0,0,57,28,38:434,471,0,0,1492,955,1233:-198.627,-180.952,-177.641,-164.588,-146.913,-160.073,-198.627,-180.952,-164.588,-198.627,-198.627,-180.952,-164.588,-198.627,-198.627,-95.8934,-78.2225,-61.8565,-95.8934,-95.8934,-78.7347,-126.033,-108.358,-91.9925,-126.033,-126.033,-23.2997,-117.604,-102.732,-85.0572,-68.6911,-102.732,-102.732,0,-30.1318,-91.2931 dDocent_Contig_12705 39 . T C 376.062 . AB=0.239437;ABP=44.88;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=103;DPB=103;DPRA=4.4375;EPP=39.9253;EPPR=189.757;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=683;QR=3407;RO=86;RPL=0;RPP=39.9253;RPPR=189.757;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=86;SRP=189.757;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:26,7:26:1031:7:283:-15.9085,0,-83.1494 0/0:2:2,0:2:82:0:0:0,-0.60206,-7.77968 0/0:19:19,0:19:758:0:0:0,-5.71957,-68.5382 0/1:38:28,10:28:1101:10:400:-24.9192,0,-87.9387 0/0:9:9,0:9:353:0:0:0,-2.70927,-32.1262 0/0:2:2,0:2:82:0:0:0,-0.60206,-7.77968 dDocent_Contig_12706 34 . T C 865.198 . AB=0.284615;ABP=55.3929;AC=4;AF=0.333333;AN=12;AO=40;CIGAR=1X;DP=201;DPB=201;DPRA=0;EPP=89.8692;EPPR=352.617;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.981366;PAO=0;PQA=0;PQR=0;PRO=0;QA=1575;QR=6207;RO=161;RPL=0;RPP=89.8692;RPPR=352.617;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=161;SRP=352.617;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:22,8:22:846:8:311:-19.3199,0,-67.4178 0/1:18:16,2:16:628:2:81:-2.26719,0,-51.4362 0/1:60:38,22:38:1483:22:872:-60.7252,0,-115.659 0/1:22:17,5:17:653:5:196:-11.3919,0,-52.4755 0/0:22:21,1:21:804:1:38:0,-2.82539,-68.8707 0/0:49:47,2:47:1793:2:77:0,-7.44227,-154.291 dDocent_Contig_12708 32 . C A 42.7689 . AB=0.116279;ABP=58.0041;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=191;DPB=191;DPRA=1.4527;EPP=13.8677;EPPR=324.715;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.806452;PAO=0;PQA=0;PQR=0;PRO=0;QA=204;QR=7373;RO=186;RPL=0;RPP=13.8677;RPPR=406.904;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=176;SRP=324.715;SRR=10;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:833:0:0:0,-6.32163,-75.2796 0/0:49:49,0:49:1933:0:0:0,-14.7505,-174.174 0/0:19:19,0:19:719:0:0:0,-5.71957,-65.0272 0/1:43:38,5:38:1497:5:204:-5.79974,0,-122.023 0/0:18:18,0:18:727:0:0:0,-5.41854,-65.7542 0/0:41:41,0:41:1664:0:0:0,-12.3422,-149.98 dDocent_Contig_12711 21 . C A 92.1873 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=5;CIGAR=4M1X1M1X8M;DP=274;DPB=272.4;DPRA=1.12774;EPP=13.8677;EPPR=558.907;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.914062;PAO=0;PQA=0;PQR=0;PRO=0;QA=194;QR=10140;RO=256;RPL=0;RPP=13.8677;RPPR=558.907;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=256;SRP=558.907;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:43:40,0,3:40:1586:0,3:0,117:0,-12.0412,-142.599,-2.03438,-132.982,-132.079 0|0:56:54,0,0:54:2143:0,0:0,0:0,-16.2556,-192.911,-16.2556,-192.911,-192.911 0|0:31:29,0,0:29:1149:0,0:0,0:0,-8.72987,-103.29,-8.72987,-103.29,-103.29 0|0:60:56,0,2:56:2222:0,2:0,77:0,-16.8577,-199.773,-10.5486,-193.452,-192.85 0|0:34:28,6,0:28:1104:6,0:236,0:-10.7416,0,-89.4193,-19.1704,-91.2255,-110.012 0|0:50:49,0,0:49:1936:0,0:0,0:0,-14.7505,-174.046,-14.7505,-174.046,-174.046 dDocent_Contig_12712 44 . G C 332.095 . AB=0.132743;ABP=267.776;AC=5;AF=0.416667;AN=12;AO=30;CIGAR=1X;DP=307;DPB=307;DPRA=0.558025;EPP=68.1545;EPPR=602.337;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.931159;PAO=0;PQA=0;PQR=0;PRO=0;QA=1192;QR=11020;RO=276;RPL=0;RPP=68.1545;RPPR=602.337;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=276;SRP=602.337;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:17,2:17:687:2:82:-2.06011,0,-56.4396 0/1:38:33,5:33:1325:5:201:-7.03138,0,-108.073 0/1:53:42,11:42:1673:11:445:-24.4506,0,-134.84 0/1:55:50,5:50:1979:5:187:-0.632416,0,-161.745 0/0:81:81,0:81:3219:0:0:0,-24.3834,-289.776 0/1:61:53,7:53:2137:7:277:-6.82767,0,-174.03 dDocent_Contig_12713 16 . T C 145.648 . AB=0.233333;ABP=21.5402;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=163;DPB=163;DPRA=1.32653;EPP=22.5536;EPPR=337.417;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.111111;PAIREDR=0.454545;PAO=0;PQA=0;PQR=0;PRO=0;QA=355;QR=6141;RO=154;RPL=0;RPP=22.5536;RPPR=337.417;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=154;SRP=337.417;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:603:0:0:0,-4.51545,-54.6076 0/0:35:33,2:33:1325:2:80:0,-2.94447,-111.922 0/0:29:29,0:29:1163:0:0:0,-8.72987,-104.952 0/1:30:23,7:23:903:7:275:-16.0876,0,-72.5379 0/0:22:22,0:22:880:0:0:0,-6.62266,-79.5081 0/0:32:32,0:32:1267:0:0:0,-9.63296,-114.301 dDocent_Contig_12714 9 . G T 473.295 . AB=0.175758;ABP=153.684;AC=2;AF=0.166667;AN=12;AO=44;CIGAR=1X;DP=436;DPB=436;DPRA=15.0714;EPP=98.5551;EPPR=854.227;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1646;QR=14953;RO=392;RPL=0;RPP=98.5551;RPPR=854.227;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=392;SRP=854.227;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:85:70,15:70:2676:15:585:-27.4057,0,-215.442 0/1:80:66,14:66:2529:14:521:-23.1455,0,-203.728 0/0:143:135,8:135:5154:8:278:0,-17.6976,-438.523 0/0:114:107,7:107:4082:7:262:0,-10.3811,-343.535 0/0:2:2,0:2:78:0:0:0,-0.60206,-7.40347 0/0:12:12,0:12:434:0:0:0,-3.61236,-39.3946 dDocent_Contig_12716 19 . A G 421.218 . AB=0.483871;ABP=3.08035;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=93;DPB=93;DPRA=0.9375;EPP=37.7539;EPPR=170.214;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.9375;PAIREDR=0.87013;PAO=0;PQA=0;PQR=0;PRO=0;QA=639;QR=3044;RO=77;RPL=0;RPP=37.7539;RPPR=170.214;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=77;SRP=170.214;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:13,1:13:521:1:40:0,-0.218741,-43.2407 0/0:18:18,0:18:700:0:0:0,-5.41854,-63.3278 0/0:9:9,0:9:343:0:0:0,-2.70927,-31.2194 0/0:21:21,0:21:841:0:0:0,-6.32163,-76.0025 0/1:5:4,1:4:163:1:41:-2.58942,0,-13.5533 0/1:26:12,14:12:476:14:558:-42.7356,0,-35.3635 dDocent_Contig_12717 130 . G A 362.297 . AB=0.5;ABP=3.0103;AC=1;AF=0.125;AN=8;AO=16;CIGAR=1X;DP=237;DPB=237;DPRA=0.669014;EPP=37.7539;EPPR=482.906;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=579;QR=8317;RO=221;RPL=0;RPP=37.7539;RPPR=482.906;RPR=16;RUN=1;SAF=0;SAP=37.7539;SAR=16;SRF=0;SRP=482.906;SRR=221;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:14,14:14:533:14:508:-37.6277,0,-39.8843 0/0:93:93,0:93:3545:0:0:0,-27.9958,-319.176 0/0:67:65,2:65:2392:2:71:0,-13.4279,-208.742 0/0:49:49,0:49:1847:0:0:0,-14.7505,-166.478 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12718 109 . A T 113.776 . AB=0.25;ABP=18.2106;AC=1;AF=0.125;AN=8;AO=13;CIGAR=1X;DP=155;DPB=155;DPRA=0;EPP=31.2394;EPPR=311.359;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=427;QR=4831;RO=142;RPL=0;RPP=31.2394;RPPR=311.359;RPR=13;RUN=1;SAF=0;SAP=31.2394;SAR=13;SRF=0;SRP=311.359;SRR=142;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:21,7:21:728:7:232:-12.7755,0,-57.4133 0/0:52:50,2:50:1707:2:56:0,-10.3343,-148.595 0/0:46:44,2:44:1496:2:70:0,-7.19998,-128.283 0/0:29:27,2:27:900:2:69:0,-2.17721,-74.7514 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12719 28 . C A 3324.62 . AB=0.388889;ABP=35.8237;AC=2;AF=0.166667;AN=12;AO=120;CIGAR=1X;DP=421;DPB=421;DPRA=6.38596;EPP=263.587;EPPR=656.623;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.991667;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4790;QR=11991;RO=301;RPL=0;RPP=263.587;RPPR=656.623;RPR=120;RUN=1;SAF=120;SAP=263.587;SAR=0;SRF=301;SRP=656.623;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:675:0:0:0,-5.11751,-61.0772 0/0:58:57,1:57:2241:1:40:0,-13.4641,-197.849 0/0:12:12,0:12:484:0:0:0,-3.61236,-43.911 0/0:28:28,0:28:1131:0:0:0,-8.42884,-102.069 0/1:195:158,37:158:6301:37:1462:-73.1246,0,-508.129 0/1:111:29,82:29:1159:82:3288:-262.56,0,-71.1746 dDocent_Contig_12720 8 . T A 14533.7 . AB=0.814229;ABP=436.979;AC=8;AF=0.666666;AN=12;AO=474;CIGAR=1X2M;DP=576;DPB=576;DPRA=0;EPP=1006.4;EPPR=189.757;GTI=0;LEN=1;MEANALT=2.5;MQM=59.8819;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.0759494;PAIREDR=0.744186;PAO=0;PQA=0;PQR=0;PRO=0;QA=17938;QR=3252;RO=86;RPL=0;RPP=1032.29;RPPR=189.757;RPR=474;RUN=1;SAF=471;SAP=1006.4;SAR=3;SRF=86;SRP=189.757;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:116:14,0,99:14:530:0,99:0,3718:-300.339,-304.554,-348.001,0,-43.4426,-13.6406 0|1:161:30,0,130:30:1139:0,130:0,4911:-393.481,-402.512,-495.912,0,-93.3991,-54.2652 0|1:89:22,0,65:22:824:0,65:0,2465:-195.483,-202.105,-269.583,0,-67.4739,-47.907 0|1:109:15,0,93:15:567:0,93:0,3519:-283.855,-288.371,-334.847,0,-46.4647,-18.4689 1|1:31:0,5,25:0:0:5,25:189,966:-94.5583,-79.0671,-77.562,-15.4824,0,-7.95669 1|1:70:5,1,62:5:192:1,62:39,2359:-194.874,-193.174,-208.634,-2.90252,-15.4571,0 dDocent_Contig_12721 34 . C T 82.6913 . AB=0.090708;ABP=660.697;AC=1;AF=0.0833333;AN=12;AO=109;CIGAR=1X;DP=3145;DPB=3145;DPRA=0;EPP=239.701;EPPR=6580.4;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=59.9983;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997359;PAO=0;PQA=0;PQR=0;PRO=0;QA=4270;QR=119627;RO=3029;RPL=0;RPP=239.701;RPPR=6580.4;RPR=109;RUN=1;SAF=109;SAP=239.701;SAR=0;SRF=3029;SRP=6580.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:386:377,8:377:14874:8:298:0,-89.0293,-1310.48 0/0:474:461,12:461:18236:12:460:0,-101.044,-1598.11 0/0:359:349,10:349:13827:10:396:0,-72.0756,-1207.48 0/1:452:411,41:411:16136:41:1618:-9.79201,0,-1315.04 0/0:752:728,20:728:28741:20:796:0,-153.601,-2512.39 0/0:722:703,18:703:27813:18:702:0,-153.949,-2437.36 dDocent_Contig_12723 39 . G T 2982.31 . AB=0.438538;ABP=12.8865;AC=5;AF=0.416667;AN=12;AO=135;CIGAR=1X;DP=357;DPB=357;DPRA=0;EPP=3.79846;EPPR=3.98844;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.577778;PAIREDR=0.567568;PAO=0;PQA=0;PQR=0;PRO=0;QA=4511;QR=7380;RO=222;RPL=0;RPP=296.159;RPPR=485.077;RPR=135;RUN=1;SAF=64;SAP=3.79846;SAR=71;SRF=106;SRP=3.98844;SRR=116;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:56:53,3:53:1760:3:105:0,-7.06152,-148.882 0/1:92:62,30:62:2055:30:1040:-66.217,0,-157.523 0/1:47:29,18:29:967:18:584:-38.7185,0,-73.1862 0/1:43:33,10:33:1085:10:323:-16.4387,0,-84.9988 0/1:44:24,20:24:807:20:672:-47.5488,0,-59.6968 0/1:75:21,54:21:706:54:1787:-138.53,0,-41.2759 dDocent_Contig_12724 15 . C T 583.346 . AB=0.477273;ABP=3.20771;AC=3;AF=0.25;AN=12;AO=21;CIGAR=1X;DP=85;DPB=85;DPRA=1.07317;EPP=48.6112;EPPR=125.156;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.809524;PAIREDR=0.671875;PAO=0;PQA=0;PQR=0;PRO=0;QA=841;QR=2537;RO=64;RPL=0;RPP=48.6112;RPPR=141.985;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=62;SRP=125.156;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:465:0:0:0,-3.61236,-42.1973 0/1:17:14,3:14:568:3:122:-6.25498,0,-46.3441 0/0:11:11,0:11:445:0:0:0,-3.31133,-40.4046 0/0:18:18,0:18:716:0:0:0,-5.41854,-64.7648 0/1:10:5,5:5:201:5:197:-15.0952,0,-15.4602 0/1:17:4,13:4:142:13:522:-42.2062,0,-8.00982 dDocent_Contig_12725 7 . A G 94.3817 . AB=0.8;ABP=6.91895;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=356;DPB=356;DPRA=0.671362;EPP=26.8965;EPPR=752.168;GTI=0;LEN=1;MEANALT=1;MQM=43;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.933333;PAO=0;PQA=0;PQR=0;PRO=0;QA=381;QR=13231;RO=345;RPL=0;RPP=26.8965;RPPR=752.168;RPR=11;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=345;SRP=752.168;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:90:90,0:90:3468:0:0:0,-27.0927,-312.248 0/0:45:41,4:41:1576:4:140:0,-0.83268,-129.394 0/0:93:90,3:90:3444:3:104:0,-18.4589,-300.559 0/0:118:118,0:118:4519:0:0:0,-35.5215,-406.769 0/1:5:1,4:1:39:4:137:-10.9325,0,-2.39141 0/0:5:5,0:5:185:0:0:0,-1.50515,-17.007 dDocent_Contig_12726 12 . T C 33185.5 . AB=0.464832;ABP=10.036;AC=8;AF=0.666667;AN=12;AO=987;CIGAR=1X4M;DP=1348;DPB=1348;DPRA=0;EPP=2146.25;EPPR=665.309;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=39166;QR=11554;RO=305;RPL=0;RPP=2146.25;RPPR=665.309;RPR=987;RUN=1;SAF=987;SAP=2146.25;SAR=0;SRF=305;SRP=665.309;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:151:108,0,43:108:4085:0,43:0,1720:-109.569,-142.08,-476.926,0,-335.239,-322.295 0|1:254:130,42,79:130:4922:42,79:1661,3122:-217.761,-120.199,-511.043,0,-266.786,-379.704 0|1:85:8,4,73:8:312:4,73:161,2908:-237.047,-226.186,-250.628,0,-12.3652,-3.66341 0|1:164:55,0,109:55:2078:0,109:0,4340:-341.193,-357.749,-528.064,0,-170.699,-137.886 1|1:237:1,0,232:1:39:0,232:0,9224:-825.822,-826.123,-829.329,-66.6161,-69.839,0 1|1:457:3,0,451:3:118:0,451:0,17852:-1594.38,-1595.28,-1604.99,-126.01,-135.765,0 dDocent_Contig_12727 7 . A G 231.25 . AB=0.27907;ABP=21.2406;AC=4;AF=0.4;AN=10;AO=18;CIGAR=1X;DP=95;DPB=95;DPRA=0.782609;EPP=42.0968;EPPR=168.042;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=494;QR=2909;RO=76;RPL=0;RPP=42.0968;RPPR=168.042;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=76;SRP=168.042;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:23,2:23:880:2:66:0,-1.25922,-73.2538 0/1:33:23,10:23:892:10:247:-12.5324,0,-70.6656 0/1:10:8,2:8:304:2:63:-2.97314,0,-24.7089 0/0:23:22,0:22:833:0:0:0,-6.62266,-74.9395 ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:118:-10.9112,-1.20412,0 dDocent_Contig_12728 11 . A G 84.7348 . AB=0.126437;ABP=108.464;AC=2;AF=0.25;AN=8;AO=15;CIGAR=1X;DP=166;DPB=166;DPRA=2.07246;EPP=35.5824;EPPR=330.903;GTI=0;LEN=1;MEANALT=1;MQM=59.9333;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=0.933333;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=556;QR=5996;RO=151;RPL=0;RPP=35.5824;RPPR=330.903;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=151;SRP=330.903;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:885:0:0:0,-6.92369,-79.949 0/0:56:52,4:52:2100:4:141:0,-3.82341,-176.143 0/1:22:18,4:18:731:4:145:-6.77672,0,-59.4912 0/1:65:58,7:58:2280:7:270:-5.09461,0,-185.802 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12729 14 . G A 4271.74 . AB=0.629032;ABP=29.9085;AC=8;AF=0.666667;AN=12;AO=137;CIGAR=2X;DP=206;DPB=206;DPRA=0;EPP=242.807;EPPR=152.842;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.89781;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5428;QR=2616;RO=69;RPL=0;RPP=300.502;RPPR=152.842;RPR=137;RUN=1;SAF=130;SAP=242.807;SAR=7;SRF=69;SRP=152.842;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:57:20,37:20:747:37:1470:-115.399,0,-50.3934 0|1:33:12,21:12:457:21:827:-64.813,0,-31.5439 0|1:49:15,34:15:575:34:1347:-106.748,0,-37.3406 0|1:47:22,25:22:837:25:989:-75.1641,0,-61.5001 1|1:6:0,6:0:0:6:245:-22.4295,-1.80618,0 1|1:14:0,14:0:0:14:550:-49.8423,-4.21442,0 dDocent_Contig_12731 22 . G A 3065.69 . AB=0.391791;ABP=30.2671;AC=5;AF=0.416667;AN=12;AO=105;CIGAR=1X1M1X;DP=268;DPB=268;DPRA=0;EPP=231.015;EPPR=248.461;GTI=0;LEN=1;MEANALT=2;MQM=59.7524;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.990476;PAIREDR=0.965812;PAO=0;PQA=0;PQR=0;PRO=0;QA=4130;QR=4615;RO=117;RPL=0;RPP=231.015;RPPR=257.073;RPR=105;RUN=1;SAF=105;SAP=231.015;SAR=0;SRF=116;SRP=248.461;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:33:14,19,0:14:552:19,0:747,0:-57.6198,0,-40.0884,-61.8342,-45.8079,-107.249 0|1:59:30,15,14:30:1191:15,14:584,530:-38.9667,0,-93.5416,-4.56997,-54.6301,-98.4051 0|1:44:22,17,5:22:864:17,5:675,177:-48.9749,0,-65.9704,-41.1945,-56.6822,-110.743 0|0:62:35,11,15:35:1386:11,15:432,584:-37.4623,-13.0908,-123.86,0,-79.1788,-109.568 0|1:26:4,22,0:4:160:22,0:871,0:-70.8741,0,-6.95665,-72.0782,-13.5793,-85.2586 0|1:44:12,21,10:12:462:21,10:821,376:-63.8928,0,-31.6133,-36.7092,-7.13783,-71.6268 dDocent_Contig_12732 107 . N A 97.0363 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=104;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:104:-9.70309,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12733 14 . T C 1214.13 . AB=0.37931;ABP=17.6865;AC=2;AF=0.166667;AN=12;AO=44;CIGAR=1X;DP=232;DPB=232;DPRA=2;EPP=98.5551;EPPR=411.247;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994681;PAO=0;PQA=0;PQR=0;PRO=0;QA=1766;QR=7536;RO=188;RPL=0;RPP=98.5551;RPPR=411.247;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=188;SRP=411.247;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:665:0:0:0,-5.11751,-60.175 0/0:25:25,0:25:1016:0:0:0,-7.52575,-91.7319 0/0:39:39,0:39:1557:0:0:0,-11.7402,-140.368 0/0:35:35,0:35:1405:0:0:0,-10.536,-126.703 0/1:38:20,18:20:806:18:725:-54.1359,0,-61.4178 0/1:78:52,26:52:2087:26:1041:-70.4989,0,-164.521 dDocent_Contig_12734 10 . C T 122.577 . AB=0.272727;ABP=12.8806;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=1X;DP=52;DPB=52;DPRA=2.46667;EPP=18.2106;EPPR=100.727;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=278;QR=1809;RO=45;RPL=0;RPP=18.2106;RPPR=100.727;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=45;SRP=100.727;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:9:5,4:5:197:4:157:-11.7993,0,-15.3965 0/0:15:14,1:14:567:1:41:0,-0.420883,-47.2785 0/0:5:5,0:5:204:0:0:0,-1.50515,-18.744 0/1:13:11,2:11:440:2:80:-3.6784,0,-36.0403 0/0:6:6,0:6:237:0:0:0,-1.80618,-21.7026 0/0:4:4,0:4:164:0:0:0,-1.20412,-15.1499 dDocent_Contig_12735 17 . G A 66.5066 . AB=0.166667;ABP=37.7539;AC=3;AF=0.3;AN=10;AO=7;CIGAR=1X2M1X;DP=62;DPB=62;DPRA=15.25;EPP=18.2106;EPPR=120.27;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=59.9444;NS=5;NUMALT=1;ODDS=3.46945e-18;PAIRED=0;PAIREDR=0.944444;PAO=0;PQA=0;PQR=0;PRO=0;QA=281;QR=2106;RO=54;RPL=0;RPP=18.2106;RPPR=120.27;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=54;SRP=120.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:25:23,1:23:889:1:41:0,-3.49485,-76.2715 0|1:15:13,2:13:514:2:79:-2.98218,0,-42.0905 0|1:7:5,2:5:191:2:82:-5.67247,0,-15.4503 0|1:14:12,2:12:477:2:79:-3.28321,0,-39.068 .:.:.:.:.:.:.:. 0|0:1:1,0:1:35:0:0:0,-0.30103,-3.49863 dDocent_Contig_12736 32 . G A 320.622 . AB=0.8;ABP=10.8276;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X3M;DP=144;DPB=144;DPRA=0.863388;EPP=26.8965;EPPR=285.302;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.636364;PAIREDR=0.938462;PAO=0;PQA=0;PQR=0;PRO=0;QA=421;QR=5042;RO=130;RPL=0;RPP=26.8965;RPPR=285.302;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=130;SRP=285.302;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:23:23,0,0:23:866:0,0:0,0:0,-6.92369,-78.2466,-6.92369,-78.2466,-78.2466 0|0:38:38,0,0:38:1475:0,0:0,0:0,-11.4391,-133.009,-11.4391,-133.009,-133.009 0|0:27:25,0,2:25:983:0,2:0,68:0,-7.52575,-88.4308,-1.66988,-82.9188,-82.3167 0|0:42:41,0,1:41:1615:0,1:0,40:0,-12.3422,-145.198,-8.64758,-141.903,-141.602 0|1:10:2,0,8:2:70:0,8:0,313:-25.5219,-26.1239,-31.8094,0,-6.04342,-3.63518 0|1:4:1,3,0:1:33:3,0:117,0:-9.70609,0,-2.09501,-10.0071,-2.9981,-12.6604 dDocent_Contig_12737 9 . G A 559.511 . AB=0.338462;ABP=17.7429;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X3M1X;DP=133;DPB=133;DPRA=1.91176;EPP=50.7827;EPPR=244.044;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=867;QR=4361;RO=111;RPL=0;RPP=50.7827;RPPR=244.044;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=111;SRP=244.044;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:4:4,0:4:156:0:0:0,-1.20412,-14.417 0|0:22:22,0:22:868:0:0:0,-6.62266,-78.4365 0|0:20:20,0:20:788:0:0:0,-6.0206,-71.2445 0|0:22:22,0:22:876:0:0:0,-6.62266,-79.1554 0|1:40:31,9:31:1207:9:352:-19.9999,0,-96.8753 0|1:25:12,13:12:466:13:515:-39.173,0,-34.7643 dDocent_Contig_12739 42 . G A 301.928 . AB=0.25;ABP=20.3821;AC=3;AF=0.3;AN=10;AO=12;CIGAR=1X;DP=310;DPB=310;DPRA=0.19708;EPP=29.068;EPPR=639.281;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=449;QR=11563;RO=297;RPL=0;RPP=29.068;RPPR=639.281;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=297;SRP=647.938;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 0/0:13:13,0:13:505:0:0:0,-3.91339,-45.7899 0/1:32:24,8:24:962:8:288:-16.6189,0,-77.2462 1/1:4:0,4:0:0:4:161:-14.8749,-1.20412,0 0/0:163:162,0:162:6337:0:0:0,-48.7669,-570.029 0/0:98:98,0:98:3759:0:0:0,-29.5009,-338.344 dDocent_Contig_12740 15 . G T 1693.61 . AB=0.316038;ABP=65.3275;AC=6;AF=0.5;AN=12;AO=67;CIGAR=1X;DP=212;DPB=212;DPRA=0;EPP=148.499;EPPR=317.874;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.985075;PAIREDR=0.958621;PAO=0;PQA=0;PQR=0;PRO=0;QA=2692;QR=5832;RO=145;RPL=0;RPP=148.499;RPPR=317.874;RPR=67;RUN=1;SAF=67;SAP=148.499;SAR=0;SRF=145;SRP=317.874;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:11,13:11:449:13:527:-40.552,0,-33.5412 0/1:47:37,10:37:1479:10:390:-21.3037,0,-119.205 0/1:57:42,15:42:1687:15:602:-37.3589,0,-134.887 0/1:62:46,16:46:1854:16:645:-39.7186,0,-148.399 0/1:12:5,7:5:205:7:285:-22.412,0,-15.2226 0/1:10:4,6:4:158:6:243:-19.2377,0,-11.5891 dDocent_Contig_12741 209 . N G 77.8076 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12743 74 . C T 357.333 . AB=0.326087;ABP=15.095;AC=1;AF=0.125;AN=8;AO=15;CIGAR=1X;DP=84;DPB=84;DPRA=3.63158;EPP=35.5824;EPPR=152.842;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.971014;PAO=0;PQA=0;PQR=0;PRO=0;QA=566;QR=2473;RO=69;RPL=15;RPP=35.5824;RPPR=152.842;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=69;SRP=152.842;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:471:0:0:0,-4.21442,-42.7075 0/0:11:11,0:11:381:0:0:0,-3.31133,-34.6208 0/0:13:13,0:13:503:0:0:0,-3.91339,-45.6187 0/1:46:31,15:31:1118:15:566:-37.4323,0,-87.0599 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12744 19 . A C 533.763 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=929;DPB=929;DPRA=0.0820569;EPP=35.5824;EPPR=1979.05;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=584;QR=35368;RO=910;RPL=0;RPP=35.5824;RPPR=1979.05;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=910;SRP=1979.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:287:284,0:284:11016:0:0:0,-85.4925,-990.608 0/0:233:232,0:232:9057:0:0:0,-69.839,-814.329 0/0:246:246,0:246:9561:0:0:0,-74.0534,-860.033 0/0:144:144,0:144:5575:0:0:0,-43.3483,-501.642 1/1:15:0,15:0:0:15:584:-52.8992,-4.51545,0 0/0:4:4,0:4:159:0:0:0,-1.20412,-14.692 dDocent_Contig_12745 10 . C A 413.401 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=4;CIGAR=1M1I1X2M;DP=188;DPB=189;DPRA=1.17857;EPP=11.6962;EPPR=352.617;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.254658;PAO=0;PQA=0;PQR=0;PRO=0;QA=158;QR=6269;RO=161;RPL=0;RPP=11.6962;RPPR=352.617;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=161;SRP=352.617;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:18:8,0,9:8:316:0,9:0,349:-26.2517,-28.66,-54.6663,0,-25.9993,-23.29 0|0:48:40,0,8:40:1558:0,8:0,311:-13.8716,-25.9128,-153.963,0,-128.439,-126.03 0|0:28:28,0,0:28:1088:0,0:0,0:0,-8.42884,-98.214,-8.42884,-98.214,-98.214 0|0:28:23,0,4:23:900:0,4:0,162:-6.43859,-13.3623,-87.3519,0,-73.9917,-72.7876 0|0:31:29,2,0:29:1119:2,0:81,0:0,-1.6462,-93.3237,-8.72987,-93.9258,-100.606 0|0:35:33,2,0:33:1288:2,0:77,0:0,-3.22722,-108.893,-9.93399,-109.495,-115.816 dDocent_Contig_12746 26 . C G 2606.29 . AB=0.208264;ABP=450.258;AC=3;AF=0.25;AN=12;AO=128;CIGAR=1X;DP=1210;DPB=1210;DPRA=21.9074;EPP=280.959;EPPR=2350.37;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5052;QR=43148;RO=1081;RPL=0;RPP=280.959;RPPR=2350.37;RPR=128;RUN=1;SAF=128;SAP=280.959;SAR=0;SRF=1081;SRP=2350.37;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:49:28,21:28:1119:21:802:-57.7443,0,-86.2445 0/0:5:5,0:5:200:0:0:0,-1.50515,-18.379 0/0:22:22,0:22:887:0:0:0,-6.62266,-80.1379 0/1:61:13,48:13:522:48:1883:-151.303,0,-28.9609 0/1:495:438,57:438:17515:57:2285:-56.8031,0,-1425.88 0/0:578:575,2:575:22905:2:82:0,-166.324,-2051.69 dDocent_Contig_12747 1 . N G 848.995 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=25;CIGAR=1X;DP=25;DPB=25;DPRA=0;EPP=57.2971;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=916;QR=0;RO=0;RPL=0;RPP=57.2971;RPPR=0;RPR=25;RUN=1;SAF=0;SAP=57.2971;SAR=25;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:5:0,5:0:0:5:174:-15.9999,-1.50515,0 1/1:10:0,10:0:0:10:372:-33.83,-3.0103,0 1/1:5:0,5:0:0:5:191:-17.5585,-1.50515,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:68:-6.45788,-0.60206,0 1/1:3:0,3:0:0:3:111:-10.3539,-0.90309,0 dDocent_Contig_12748 59 . G C 595.724 . AB=0.0909091;ABP=34.9902;AC=3;AF=0.25;AN=12;AO=19;CIGAR=1X;DP=162;DPB=162;DPRA=0.634146;EPP=44.2683;EPPR=313.531;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=732;QR=5647;RO=143;RPL=19;RPP=44.2683;RPPR=313.531;RPR=0;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=143;SRP=313.531;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:286:0:0:0,-2.10721,-26.1148 0/0:21:21,0:21:807:0:0:0,-6.32163,-72.9367 0/1:22:20,2:20:790:2:79:-0.874972,0,-64.7928 0/0:94:94,0:94:3724:0:0:0,-28.2968,-335.168 1/1:17:0,17:0:0:17:653:-59.0895,-5.11751,0 0/0:1:1,0:1:40:0:0:0,-0.30103,-3.99568 dDocent_Contig_12749 58 . C A 2274.43 . AB=0.111111;ABP=14.8328;AC=3;AF=0.3;AN=10;AO=64;CIGAR=1X;DP=116;DPB=116;DPRA=2.45455;EPP=141.985;EPPR=115.927;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0.984375;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2561;QR=2052;RO=52;RPL=64;RPP=141.985;RPPR=115.927;RPR=0;RUN=1;SAF=64;SAP=141.985;SAR=0;SRF=52;SRP=115.927;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:575:0:0:0,-4.51545,-52.0761 0/0:6:6,0:6:230:0:0:0,-1.80618,-21.0603 0/0:23:23,0:23:924:0:0:0,-6.92369,-83.4625 0/1:9:8,1:8:323:1:40:-1.28641,0,-26.7297 ./.:.:.:.:.:.:.:. 1/1:63:0,63:0:0:63:2521:-227.028,-18.9649,0 dDocent_Contig_12750 194 . C G 3749.04 . AB=0.33;ABP=53.2147;AC=7;AF=0.583333;AN=12;AO=66;CIGAR=1X3M;DP=227;DPB=227;DPRA=3.7037;EPP=146.327;EPPR=213.643;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2537;QR=3328;RO=97;RPL=66;RPP=146.327;RPPR=213.643;RPR=0;RUN=1;SAF=0;SAP=146.327;SAR=66;SRF=0;SRP=213.643;SRR=97;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:15:1,14,0:1:37:14,0:521,0:-43.5288,-0.817621,0,-43.8299,-4.21442,-46.8568 0|0:12:12,0,0:12:382:0,0:0,0:0,-3.61236,-34.6878,-3.61236,-34.6878,-34.6878 0|1:17:11,0,6:11:391:0,6:0,234:-16.3136,-19.6249,-51.4639,0,-32.2165,-30.4103 0|1:52:38,0,14:38:1339:0,14:0,527:-32.1124,-43.5515,-152.547,0,-109.365,-105.151 0|1:41:35,0,6:35:1179:0,6:0,221:-7.90003,-18.4361,-113.937,0,-95.8641,-94.0579 1|1:90:0,50,40:0:0:50,40:1881,1555:-282.271,-128.167,-113.115,-154.488,0,-142.446 dDocent_Contig_12752 133 . T C 5878.8 . AB=0.728745;ABP=115.268;AC=8;AF=0.666667;AN=12;AO=231;CIGAR=1X;DP=298;DPB=298;DPRA=0;EPP=504.62;EPPR=148.499;GTI=0;LEN=1;MEANALT=1;MQM=44.8225;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.519481;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8898;QR=2683;RO=67;RPL=0;RPP=504.62;RPPR=148.499;RPR=231;RUN=1;SAF=0;SAP=504.62;SAR=231;SRF=0;SRP=148.499;SRR=67;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:10,26:10:398:26:980:-74.7614,0,-25.3399 0/1:56:14,42:14:564:42:1596:-100.264,0,-34.244 0/1:62:8,54:8:328:54:2120:-116.091,0,-11.2265 0/1:93:35,58:35:1393:58:2251:-157.542,0,-97.6303 1/1:31:0,31:0:0:31:1178:-88.5471,-9.33193,0 1/1:20:0,20:0:0:20:773:-57.8969,-6.0206,0 dDocent_Contig_12753 40 . G A 316.33 . AB=0.226415;ABP=37.4671;AC=4;AF=0.333333;AN=12;AO=14;CIGAR=1X;DP=74;DPB=74;DPRA=2.89474;EPP=33.4109;EPPR=133.299;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=552;QR=2299;RO=60;RPL=0;RPP=33.4109;RPPR=133.299;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=60;SRP=133.299;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:4:4,0:4:151:0:0:0,-1.20412,-13.9553 0/0:9:9,0:9:350:0:0:0,-2.70927,-31.8589 1/1:2:0,2:0:0:2:80:-7.59179,-0.60206,0 0/0:6:6,0:6:215:0:0:0,-1.80618,-19.6878 0/1:19:11,8:11:432:8:320:-23.4485,0,-33.5153 0/1:34:30,4:30:1151:4:152:-3.81324,0,-93.6428 dDocent_Contig_12754 132 . G A 2403.48 . AB=0.5;ABP=3.0103;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X1M2X1M2X4M;DP=136;DPB=136;DPRA=1.94203;EPP=35.5824;EPPR=0;GTI=0;LEN=1;MEANALT=2.5;MQM=10.6;MQMR=0;NS=6;NUMALT=3;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=159;QR=0;RO=0;RPL=0;RPP=35.5824;RPPR=0;RPR=15;RUN=1;SAF=0;SAP=35.5824;SAR=15;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:14:0,0,0,14:0:0:0,0,14:0,0,225:-16.8312,-16.8312,-16.8312,-16.8312,-16.8312,-16.8312,-4.21442,-4.21442,-4.21442,0 0|0:24:0,0,0,24:0:0:0,0,24:0,0,683:-55.855,-55.855,-55.855,-55.855,-55.855,-55.855,-7.22472,-7.22472,-7.22472,0 0|0:19:0,0,0,19:0:0:0,0,19:0,0,519:-41.8539,-41.8539,-41.8539,-41.8539,-41.8539,-41.8539,-5.71957,-5.71957,-5.71957,0 0|0:12:0,0,0,12:0:0:0,0,12:0,0,330:-26.7456,-26.7456,-26.7456,-26.7456,-26.7456,-26.7456,-3.61236,-3.61236,-3.61236,0 1|0:28:0,14,0,14:0:0:14,0,14:150,0,333:-28.0186,-22.2599,-18.0455,-28.0186,-22.2599,-28.0186,-5.90272,0,-5.90272,-1.6883 0|0:39:0,1,8,30:0:0:1,8,30:9,309,879:-71.9196,-71.6607,-71.3597,-63.5636,-63.3067,-61.1554,-9.0309,-8.77712,-0.574999,0 dDocent_Contig_12755 10 . A C 35.5166 . AB=0.142857;ABP=26.2761;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=266;DPB=266;DPRA=0.428571;EPP=9.52472;EPPR=571.936;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996183;PAO=0;PQA=0;PQR=0;PRO=0;QA=119;QR=10310;RO=262;RPL=0;RPP=9.52472;RPPR=571.936;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=262;SRP=571.936;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:18,3:18:716:3:119:-4.77338,0,-58.4443 0/0:35:35,0:35:1376:0:0:0,-10.536,-124.1 0/0:88:87,0:87:3416:0:0:0,-26.1896,-307.089 0/0:54:54,0:54:2142:0:0:0,-16.2556,-192.967 0/0:43:43,0:43:1650:0:0:0,-12.9443,-148.726 0/0:25:25,0:25:1010:0:0:0,-7.52575,-91.194 dDocent_Contig_12757 55 . G T 173.797 . AB=0.228571;ABP=25.4075;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=123;DPB=123;DPRA=1.98864;EPP=20.3821;EPPR=252.73;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.895652;PAO=0;PQA=0;PQR=0;PRO=0;QA=323;QR=4512;RO=115;RPL=8;RPP=20.3821;RPPR=252.73;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=115;SRP=252.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1316:0:0:0,-9.93399,-118.703 0/0:6:6,0:6:243:0:0:0,-1.80618,-22.248 0/0:10:10,0:10:402:0:0:0,-3.0103,-36.5395 0/1:35:27,8:27:1018:8:323:-18.9025,0,-81.3639 0/0:20:20,0:20:800:0:0:0,-6.0206,-72.3181 0/0:19:19,0:19:733:0:0:0,-5.71957,-66.2901 dDocent_Contig_12758 48 . C T 92.1652 . AB=0.10828;ABP=212.26;AC=3;AF=0.25;AN=12;AO=20;CIGAR=1X;DP=342;DPB=342;DPRA=1.02143;EPP=46.4397;EPPR=52.8867;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.95;PAIREDR=0.906832;PAO=0;PQA=0;PQR=0;PRO=0;QA=762;QR=12643;RO=322;RPL=0;RPP=46.4397;RPPR=52.8867;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=322;SRP=702.224;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:56:56,0:56:2171:0:0:0,-16.8577,-195.57 0/0:81:79,2:79:3112:2:71:0,-17.6423,-273.435 0/0:48:47,1:47:1839:1:35:0,-10.9508,-162.219 0/1:79:72,7:72:2854:7:267:-0.609095,0,-233.192 0/1:20:18,2:18:702:2:80:-1.57119,0,-57.4883 0/1:58:50,8:50:1965:8:309:-10.7105,0,-159.592 dDocent_Contig_12759 33 . G C 250.06 . AB=0.26087;ABP=25.858;AC=3;AF=0.25;AN=12;AO=12;CIGAR=1X;DP=77;DPB=77;DPRA=1.48387;EPP=29.068;EPPR=144.156;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.984615;PAO=0;PQA=0;PQR=0;PRO=0;QA=477;QR=2607;RO=65;RPL=0;RPP=29.068;RPPR=144.156;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=65;SRP=144.156;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:283:0:0:0,-2.10721,-25.8434 0/1:10:6,4:6:244:4:158:-11.5896,0,-19.3285 0/0:11:11,0:11:441:0:0:0,-3.31133,-40.0434 0/1:21:16,5:16:645:5:199:-11.9664,0,-52.0624 0/1:15:12,3:12:472:3:120:-6.67186,0,-38.3133 0/0:13:13,0:13:522:0:0:0,-3.91339,-47.3272 dDocent_Contig_12760 20 . A G 255.006 . AB=0.166667;ABP=101.45;AC=3;AF=0.25;AN=12;AO=17;CIGAR=1X;DP=186;DPB=186;DPRA=1.21429;EPP=39.9253;EPPR=369.989;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.647059;PAIREDR=0.532544;PAO=0;PQA=0;PQR=0;PRO=0;QA=670;QR=6701;RO=169;RPL=0;RPP=39.9253;RPPR=369.989;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=169;SRP=369.989;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:954:0:0:0,-7.22472,-86.1624 0/1:49:44,5:44:1749:5:205:-4.08454,0,-142.885 0/1:26:17,9:17:691:9:342:-23.2971,0,-54.6921 0/0:33:33,0:33:1294:0:0:0,-9.93399,-116.725 0/1:27:24,3:24:958:3:123:-3.33698,0,-78.3946 0/0:27:27,0:27:1055:0:0:0,-8.12781,-95.2404 dDocent_Contig_12761 41 . C T 64.55 . AB=0.181818;ABP=22.3561;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X12M;DP=181;DPB=181;DPRA=0.691824;EPP=11.6962;EPPR=363.475;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0.572289;PAO=0;PQA=0;PQR=0;PRO=0;QA=158;QR=6452;RO=166;RPL=0;RPP=11.6962;RPPR=363.475;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=166;SRP=363.475;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:24:23,0,0,0:23:900:0,0,0:0,0,0:0,-6.92369,-80.9147,-6.92369,-80.9147,-80.9147,-6.92369,-80.9147,-80.9147,-80.9147 0|0:25:22,2,0,0:22:847:2,0,0:80,0,0:0,-2.78984,-71.8007,-6.62266,-72.4028,-76.2659,-6.62266,-72.4028,-76.2659,-76.2659 0|0:50:48,2,0,0:48:1858:2,0,0:67,0,0:0,-10.4595,-162.868,-14.4494,-163.47,-167.212,-14.4494,-163.47,-167.212,-167.212 0|0:33:31,0,0,0:31:1199:0,0,0:0,0,0:0,-9.33193,-107.818,-9.33193,-107.818,-107.818,-9.33193,-107.818,-107.818,-107.818 0|1:22:18,0,4,0:18:713:0,4,0:0,158,0:-7.97782,-13.3964,-72.0837,0,-59.0821,-57.878,-13.3964,-72.0837,-59.0821,-72.0837 0|0:27:24,0,0,2:24:935:0,0,2:0,0,75:0,-7.22472,-84.0738,-7.22472,-84.0738,-84.0738,-1.10506,-77.9321,-77.9321,-77.33 dDocent_Contig_12762 35 . A G 79.0755 . AB=0.2;ABP=18.6449;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=110;DPB=110;DPRA=1.11111;EPP=11.6962;EPPR=233.186;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=164;QR=4219;RO=106;RPL=0;RPP=11.6962;RPPR=233.186;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=106;SRP=233.186;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:16,4:16:628:4:164:-9.1293,0,-50.8324 0/0:10:10,0:10:401:0:0:0,-3.0103,-36.4483 0/0:7:7,0:7:285:0:0:0,-2.10721,-26.0244 0/0:3:3,0:3:120:0:0:0,-0.90309,-11.1873 0/0:39:39,0:39:1575:0:0:0,-11.7402,-141.983 0/0:31:31,0:31:1210:0:0:0,-9.33193,-109.18 dDocent_Contig_12764 111 . G A 64.2633 . AB=0;ABP=0;AC=2;AF=0.2;AN=10;AO=3;CIGAR=2X;DP=75;DPB=75;DPRA=0.375;EPP=9.52472;EPPR=157.185;GTI=0;LEN=1;MEANALT=1.5;MQM=36;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=104;QR=2434;RO=71;RPL=0;RPP=9.52472;RPPR=157.185;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=157.185;SRR=71;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:17:17,0:17:575:0:0:0,-5.11751,-52.0699 0|0:28:28,0:28:955:0:0:0,-8.42884,-86.2603 0|0:13:11,1:11:382:1:35:0,-0.594916,-31.4113 0|0:15:15,0:15:522:0:0:0,-4.51545,-47.3101 1|1:2:0,2:0:0:2:69:-6.02795,-0.60206,0 .:.:.:.:.:.:.:. dDocent_Contig_12765 17 . C A 5372.28 . AB=0.772321;ABP=147.297;AC=4;AF=0.5;AN=8;AO=173;CIGAR=1X;DP=224;DPB=224;DPRA=0;EPP=378.675;EPPR=113.755;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6790;QR=1899;RO=51;RPL=0;RPP=378.675;RPPR=113.755;RPR=173;RUN=1;SAF=173;SAP=378.675;SAR=0;SRF=51;SRP=113.755;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:70:12,58:12:462:58:2291:-185.302,0,-20.8548 0/1:64:8,56:8:307:56:2186:-177.669,0,-8.72447 0/1:31:10,21:10:376:21:827:-65.4158,0,-24.8567 0/1:59:21,38:21:754:38:1486:-116.239,0,-50.395 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12766 27 . T C 60.7392 . AB=0.5;ABP=3.0103;AC=3;AF=0.25;AN=12;AO=18;CIGAR=1X;DP=344;DPB=344;DPRA=1.00702;EPP=42.0968;EPPR=710.91;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=710;QR=12977;RO=326;RPL=0;RPP=42.0968;RPPR=710.91;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=326;SRP=710.91;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:63:62,1:62:2467:1:41:0,-14.8703,-218.085 0/0:112:105,7:105:4167:7:278:0,-8.32553,-349.612 0/0:109:101,8:101:4008:8:312:0,-4.3725,-332.253 0/0:57:57,0:57:2294:0:0:0,-17.1587,-206.615 1/1:1:0,1:0:0:1:39:-3.89656,-0.30103,0 0/1:2:1,1:1:41:1:40:-3.39362,0,-3.49251 dDocent_Contig_12767 125 . C T 2664.23 . AB=0.449275;ABP=9.17854;AC=6;AF=0.5;AN=12;AO=124;CIGAR=1X;DP=276;DPB=276;DPRA=0;EPP=272.273;EPPR=333.074;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.975806;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3988;QR=5674;RO=152;RPL=0;RPP=272.273;RPPR=333.074;RPR=124;RUN=1;SAF=0;SAP=272.273;SAR=124;SRF=0;SRP=333.074;SRR=152;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:18:13,5:13:495:5:152:-8.56134,0,-39.4771 0/1:41:21,20:21:778:20:641:-45.6509,0,-58.0058 0/1:55:19,36:19:698:36:1151:-87.3194,0,-46.5887 0/1:75:38,37:38:1399:37:1187:-84.5378,0,-103.623 0/1:37:30,7:30:1134:7:235:-10.3399,0,-91.224 0/1:50:31,19:31:1170:19:622:-41.2356,0,-90.5506 dDocent_Contig_12768 19 . G T 811.068 . AB=0.271429;ABP=66.5414;AC=5;AF=0.416667;AN=12;AO=38;CIGAR=1X;DP=171;DPB=171;DPRA=0.903226;EPP=85.5263;EPPR=283.196;GTI=0;LEN=1;MEANALT=1;MQM=54.5526;MQMR=58.6316;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0;PAIREDR=0.308271;PAO=0;PQA=0;PQR=0;PRO=0;QA=1463;QR=5233;RO=133;RPL=0;RPP=85.5263;RPPR=291.816;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=132;SRP=283.196;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:8,8:8:322:8:326:-24.8014,0,-24.4268 0/1:31:22,9:22:865:9:337:-20.9886,0,-68.7265 0/0:31:31,0:31:1196:0:0:0,-9.33193,-107.684 0/1:37:26,11:26:1019:11:409:-25.8043,0,-80.6857 0/1:22:18,4:18:705:4:147:-6.69671,0,-57.0927 0/1:34:28,6:28:1126:6:244:-12.0377,0,-91.3874 dDocent_Contig_12769 13 . G A 280.486 . AB=0.122363;ABP=296.581;AC=3;AF=0.25;AN=12;AO=32;CIGAR=1X;DP=363;DPB=363;DPRA=1.14444;EPP=72.4974;EPPR=721.768;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.661631;PAO=0;PQA=0;PQR=0;PRO=0;QA=1270;QR=13175;RO=331;RPL=0;RPP=72.4974;RPPR=721.768;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=331;SRP=721.768;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:30,1:30:1216:1:40:0,-5.33625,-105.714 0/1:91:83,8:83:3284:8:325:-2.22533,0,-268.225 0/0:41:39,2:39:1515:2:80:0,-4.75065,-129.002 0/0:54:54,0:54:2134:0:0:0,-16.2556,-192.231 0/1:61:52,9:52:2089:9:355:-13.9459,0,-169.822 0/1:85:73,12:73:2937:12:470:-17.0582,0,-238.83 dDocent_Contig_12770 44 . G C 51.8614 . AB=0.666667;ABP=3.73412;AC=1;AF=0.1;AN=10;AO=2;CIGAR=1X;DP=335;DPB=335;DPRA=0.0361446;EPP=7.35324;EPPR=726.111;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=13230;RO=333;RPL=0;RPP=7.35324;RPPR=726.111;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=333;SRP=726.111;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:91:91,0:91:3628:0:0:0,-27.3937,-326.55 0/0:58:58,0:58:2292:0:0:0,-17.4597,-206.444 0/0:52:52,0:52:2038:0:0:0,-15.6536,-183.613 0/0:131:131,0:131:5231:0:0:0,-39.4349,-470.654 ./.:.:.:.:.:.:.:. 0/1:3:1,2:1:41:2:81:-6.78264,0,-3.19148 dDocent_Contig_12771 15 . G A 68.7262 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=2;CIGAR=7M1X2M;DP=173;DPB=171.5;DPRA=1.13274;EPP=3.0103;EPPR=356.96;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.95092;PAO=0;PQA=0;PQR=0;PRO=0;QA=76;QR=6296;RO=163;RPL=0;RPP=7.35324;RPPR=356.96;RPR=2;RUN=1;SAF=1;SAP=3.0103;SAR=1;SRF=163;SRP=356.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:56:55,0,0:55:2131:0,0:0,0:0,-16.5566,-191.9,-16.5566,-191.9,-191.9 0|0:32:30,0,2:30:1174:0,2:0,76:0,-9.0309,-105.573,-2.4187,-99.3409,-98.7388 0|0:22:22,0,0:22:841:0,0:0,0:0,-6.62266,-76.0063,-6.62266,-76.0063,-76.0063 0|0:18:17,0,0:17:670:0,0:0,0:0,-5.11751,-60.235,-5.11751,-60.235,-60.235 0|0:17:16,0,0:16:596:0,0:0,0:0,-4.81648,-53.8566,-4.81648,-53.8566,-53.8566 0|0:28:23,5,0:23:884:5,0:183,0:-8.3955,0,-71.4454,-15.3192,-72.9505,-87.9007 dDocent_Contig_12772 11 . A G 90.554 . AB=0.2;ABP=22.5536;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=199;DPB=199;DPRA=0.718391;EPP=13.8677;EPPR=424.276;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8608;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=0.4;PAIREDR=0.64433;PAO=0;PQA=0;PQR=0;PRO=0;QA=197;QR=7757;RO=194;RPL=0;RPP=13.8677;RPPR=424.276;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=194;SRP=424.276;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:961:0:0:0,-7.22472,-86.7855 0/0:41:41,0:41:1644:0:0:0,-12.3422,-148.189 0/0:20:20,0:20:790:0:0:0,-6.0206,-71.4203 0/0:51:51,0:51:2019:0:0:0,-15.3525,-181.898 0/1:25:20,5:20:811:5:197:-10.5783,0,-65.7803 0/0:38:38,0:38:1532:0:0:0,-11.4391,-137.344 dDocent_Contig_12774 15 . A G 7085.94 . AB=0.291866;ABP=238.932;AC=4;AF=0.333333;AN=12;AO=183;CIGAR=6M1X6M;DP=627;DPB=636.846;DPRA=0;EPP=400.39;EPPR=452.505;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=59.9952;NS=6;NUMALT=4;ODDS=0;PAIRED=0.989071;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7281;QR=8104;RO=207;RPL=0;RPP=400.39;RPPR=452.505;RPR=183;RUN=1;SAF=183;SAP=400.39;SAR=0;SRF=207;SRP=452.505;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:60:19,0,7,1,32:19:750:0,7,1,32:0,272,37,1252:-97.2081,-102.928,-164.642,-80.5762,-142.29,-140.183,-99.9011,-161.615,-139.264,-161.314,0,-61.7175,-39.367,-58.6913,-52.0845 0|1:96:19,8,33,3,30:19:746:8,33,3,30:296,1258,117,1187:-133.803,-115.313,-174.26,-36.3283,-73.4749,-87.7496,-129.905,-167.051,-88.0661,-190.358,-41.8373,-78.9856,0,-93.5775,-94.1645 0|1:119:25,0,38,12,36:25:976:0,38,12,36:0,1442,456,1443:-149.358,-156.884,-237.116,-38.6514,-118.881,-107.442,-119.489,-199.72,-81.4875,-196.108,-38.0004,-118.235,0,-80.839,-107.397 0|1:113:49,1,5,0,58:49:1906:1,5,0,58:39,186,0,2302:-174.745,-186.289,-342.617,-174.275,-327.697,-329.397,-189.495,-342.918,-330.902,-346.124,0,-153.438,-141.423,-156.644,-139.184 0|0:93:43,22,12,7,9:43:1699:22,12,7,9:826,421,260,367:-54.7168,0,-133.203,-33.416,-105.581,-169.624,-46.387,-118.553,-151.963,-184.103,-37.3752,-109.544,-142.955,-155.929,-174.493 0|0:146:52,28,40,0,18:52:2027:28,40,0,18:1060,1531,0,730:-109.985,-38.742,-196.922,0,-79.7138,-154.568,-125.638,-205.351,-166.609,-292.248,-65.4326,-145.147,-106.405,-232.044,-226.626 dDocent_Contig_12775 9 . C G 1895.92 . AB=0.345291;ABP=49.3707;AC=6;AF=0.5;AN=12;AO=77;CIGAR=1X;DP=223;DPB=223;DPRA=0;EPP=170.214;EPPR=320.045;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.74026;PAIREDR=0.671233;PAO=0;PQA=0;PQR=0;PRO=0;QA=2954;QR=5639;RO=146;RPL=0;RPP=170.214;RPPR=320.045;RPR=77;RUN=1;SAF=77;SAP=170.214;SAR=0;SRF=146;SRP=320.045;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:14,10:14:543:10:373:-26.695,0,-41.9913 0/1:36:25,11:25:971:11:426:-27.8576,0,-76.8661 0/1:28:20,8:20:774:8:306:-19.4709,0,-61.5591 0/1:68:48,20:48:1860:20:774:-49.5183,0,-147.175 0/1:15:7,8:7:273:8:309:-23.6576,0,-20.4226 0/1:52:32,20:32:1218:20:766:-53.6143,0,-94.2591 dDocent_Contig_12777 111 . T A 1225.79 . AB=0.381679;ABP=18.94;AC=6;AF=0.5;AN=12;AO=50;CIGAR=1X1M1X;DP=131;DPB=131;DPRA=0;EPP=111.584;EPPR=178.9;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.82;PAIREDR=0.740741;PAO=0;PQA=0;PQR=0;PRO=0;QA=1901;QR=3118;RO=81;RPL=0;RPP=111.584;RPPR=178.9;RPR=50;RUN=1;SAF=0;SAP=111.584;SAR=50;SRF=0;SRP=178.9;SRR=81;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:17:12,5:12:467:5:192:-12.5326,0,-37.2648 0|1:20:8,12:8:309:12:457:-35.4582,0,-22.1524 0|1:14:3,11:3:116:11:422:-34.1178,0,-6.60328 0|1:20:14,6:14:542:6:219:-14.0392,0,-43.1053 0|1:42:30,12:30:1145:12:455:-28.6542,0,-90.7061 0|1:18:14,4:14:539:4:156:-8.99875,0,-43.4372 dDocent_Contig_12778 13 . G A 451.315 . AB=0.287879;ABP=28.8048;AC=2;AF=0.166667;AN=12;AO=19;CIGAR=1X;DP=105;DPB=105;DPRA=3.38462;EPP=44.2683;EPPR=189.757;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=750;QR=3420;RO=86;RPL=0;RPP=44.2683;RPPR=189.757;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=86;SRP=189.757;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:390:0:0:0,-3.0103,-35.4539 0/1:37:32,5:32:1257:5:204:-7.60592,0,-102.262 0/0:8:8,0:8:324:0:0:0,-2.40824,-29.5292 0/0:19:19,0:19:767:0:0:0,-5.71957,-69.3507 0/0:2:2,0:2:81:0:0:0,-0.60206,-7.68573 0/1:29:15,14:15:601:14:546:-40.7472,0,-45.6987 dDocent_Contig_12783 9 . C A 104.99 . AB=0.25;ABP=13.8677;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=99;DPB=99;DPRA=1.26582;EPP=13.8677;EPPR=150.855;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=50.8617;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.648936;PAO=0;PQA=0;PQR=0;PRO=0;QA=193;QR=3614;RO=94;RPL=0;RPP=13.8677;RPPR=207.129;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=87;SRP=150.855;SRR=7;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:15,5:15:578:5:193:-11.7208,0,-45.6526 0/0:21:21,0:21:814:0:0:0,-6.32163,-71.2813 0/0:26:26,0:26:1000:0:0:0,-7.82678,-87.3015 0/0:21:21,0:21:803:0:0:0,-6.32163,-69.2667 0/0:7:7,0:7:276:0:0:0,-2.10721,-20.4154 0/0:4:4,0:4:143:0:0:0,-1.20412,-9.57159 dDocent_Contig_12784 28 . C T 30.0894 . AB=0.666667;ABP=3.73412;AC=1;AF=0.1;AN=10;AO=2;CIGAR=1X;DP=74;DPB=74;DPRA=0.169014;EPP=7.35324;EPPR=159.356;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=58;QR=2806;RO=72;RPL=0;RPP=7.35324;RPPR=159.356;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=72;SRP=159.356;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:692:0:0:0,-5.41854,-62.6094 0/0:18:18,0:18:707:0:0:0,-5.41854,-63.96 0/0:25:25,0:25:972:0:0:0,-7.52575,-87.7859 0/0:10:10,0:10:395:0:0:0,-3.0103,-35.9091 0/1:3:1,2:1:40:2:58:-4.60361,0,-3.09259 ./.:.:.:.:.:.:.:. dDocent_Contig_12785 12 . G A 49.961 . AB=0.105882;ABP=117.69;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=310;DPB=310;DPRA=0.755556;EPP=22.5536;EPPR=656.623;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=367;QR=11427;RO=301;RPL=0;RPP=22.5536;RPPR=656.623;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=301;SRP=656.623;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:46:46,0:46:1764:0:0:0,-13.8474,-159.001 0/1:51:46,5:46:1722:5:204:-3.3915,0,-139.861 0/1:34:30,4:30:1149:4:163:-4.82341,0,-93.4528 0/0:49:49,0:49:1867:0:0:0,-14.7505,-168.264 0/0:57:57,0:57:2214:0:0:0,-17.1587,-199.463 0/0:73:73,0:73:2711:0:0:0,-21.9752,-244.16 dDocent_Contig_12787 31 . A G 80.4343 . AB=0.5;ABP=3.0103;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=125;DPB=125;DPRA=0.252101;EPP=9.52472;EPPR=267.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=8.67362e-19;PAIRED=0;PAIREDR=0.5;PAO=0;PQA=0;PQR=0;PRO=0;QA=122;QR=4864;RO=122;RPL=0;RPP=9.52472;RPPR=267.93;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=122;SRP=267.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:1129:0:0:0,-8.72987,-101.884 0/0:28:28,0:28:1126:0:0:0,-8.42884,-101.624 0/1:6:3,3:3:120:3:122:-9.56631,0,-9.38172 0/0:24:24,0:24:965:0:0:0,-7.22472,-87.1498 0/0:16:16,0:16:645:0:0:0,-4.81648,-58.3842 0/0:22:22,0:22:879:0:0:0,-6.62266,-79.4188 dDocent_Contig_12788 10 . T C 287.444 . AB=0.21875;ABP=46.9826;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X3M1D3M;DP=197;DPB=195.125;DPRA=0.950495;EPP=35.5824;EPPR=396.047;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.466667;PAIREDR=0.546961;PAO=0;PQA=0;PQR=0;PRO=0;QA=600;QR=7156;RO=181;RPL=0;RPP=35.5824;RPPR=396.047;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=181;SRP=396.047;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:30:23,7:23:902:7:285:-16.9935,0,-72.4581 0|1:34:27,7:27:1062:7:276:-14.9727,0,-85.6434 0|0:22:22,0:22:870:0:0:0,-6.62266,-78.6155 0|0:32:32,0:32:1281:0:0:0,-9.63296,-115.563 0|0:32:30,1:30:1188:1:39:0,-5.68019,-103.442 0|0:47:47,0:47:1853:0:0:0,-14.1484,-166.996 dDocent_Contig_12789 7 . A G 1440.65 . AB=0.391534;ABP=22.3238;AC=5;AF=0.416667;AN=12;AO=76;CIGAR=1X;DP=296;DPB=296;DPRA=0;EPP=168.042;EPPR=476.391;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2352;QR=8301;RO=218;RPL=0;RPP=168.042;RPPR=476.391;RPR=76;RUN=1;SAF=76;SAP=168.042;SAR=0;SRF=218;SRP=476.391;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:15:2,13:2:78:13:367:-28.7819,0,-2.88802 0/1:21:8,12:8:307:12:385:-28.8072,0,-21.8302 0/1:29:14,14:14:533:14:479:-34.8728,0,-39.7566 0/1:38:25,13:25:950:13:432:-27.7523,0,-74.3736 0/0:107:105,2:105:4012:2:37:0,-28.6954,-357.664 0/1:86:64,22:64:2421:22:652:-33.0636,0,-192.211 dDocent_Contig_12790 22 . T A 9255.61 . AB=0.50783;ABP=3.24834;AC=8;AF=0.666667;AN=12;AO=300;CIGAR=1X;DP=521;DPB=521;DPRA=0;EPP=654.452;EPPR=482.906;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11892;QR=8755;RO=221;RPL=0;RPP=654.452;RPPR=482.906;RPR=300;RUN=1;SAF=300;SAP=654.452;SAR=0;SRF=221;SRP=482.906;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:6,32:6:236:32:1266:-102.772,0,-10.1697 0/1:150:106,44:106:4224:44:1752:-112.745,0,-334.971 0/1:99:47,52:47:1810:52:2046:-154.533,0,-133.303 0/1:160:61,99:61:2444:99:3964:-308.58,0,-171.94 1/1:29:1,28:1:41:28:1084:-93.748,-4.6353,0 1/1:45:0,45:0:0:45:1780:-160.404,-13.5464,0 dDocent_Contig_12791 20 . A T 105.586 . AB=0.136986;ABP=86.5674;AC=3;AF=0.25;AN=12;AO=14;CIGAR=3M1X8M1X1M10I2M2X1M2X;DP=166;DPB=169.286;DPRA=3.48889;EPP=33.4109;EPPR=283.13;GTI=0;LEN=1;MEANALT=3.6;MQM=56;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.714286;PAIREDR=0.875969;PAO=0;PQA=0;PQR=0;PRO=0;QA=534;QR=4975;RO=129;RPL=0;RPP=33.4109;RPPR=283.13;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=129;SRP=283.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:14:9,2,1,1:9:344:2,1,1:64,40,40:-2.41473,0,-27.6148,-1.8202,-24.9205,-29.7636,-1.8202,-24.9205,-26.7674,-29.7636 0|0:50:36,2,3,3:36:1401:2,3,3:78,119,122:0,-4.42358,-118.971,-1.03649,-109.777,-115.286,-0.766214,-109.509,-106.124,-115.018 0|0:9:9,0,0,0:9:346:0,0,0:0,0,0:0,-2.70927,-31.4976,-2.70927,-31.4976,-31.4976,-2.70927,-31.4976,-31.4976,-31.4976 0|0:34:29,2,0,3:29:1097:2,0,3:78,0,106:0,-2.57657,-91.9177,-8.72987,-92.5198,-98.6643,-0.114947,-83.8941,-90.0385,-89.1354 0|1:24:20,2,0,0:20:776:2,0,0:80,0,0:-0.606985,0,-63.2121,-6.62758,-63.8142,-70.4058,-6.62758,-63.8142,-70.4058,-70.4058 0|1:35:26,6,0,0:26:1011:6,0,0:234,0,0:-11.3332,0,-81.3651,-19.16,-83.1713,-102.266,-19.16,-83.1713,-102.266,-102.266 dDocent_Contig_12794 18 . C T 845.474 . AB=0.311927;ABP=36.4988;AC=4;AF=0.333333;AN=12;AO=34;CIGAR=1X;DP=301;DPB=301;DPRA=0.283854;EPP=76.8404;EPPR=582.793;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.941176;PAIREDR=0.992509;PAO=0;PQA=0;PQR=0;PRO=0;QA=1368;QR=10764;RO=267;RPL=0;RPP=76.8404;RPPR=582.793;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=267;SRP=582.793;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:18:14,4:14:554:4:163:-9.63989,0,-44.7808 0/1:38:30,8:30:1207:8:315:-17.2739,0,-97.4588 0/1:24:9,15:9:368:15:608:-47.8332,0,-26.2606 0/1:29:22,7:22:873:7:282:-17.0222,0,-70.1473 0/0:67:67,0:67:2704:0:0:0,-20.169,-243.467 0/0:125:125,0:125:5058:0:0:0,-37.6287,-455.069 dDocent_Contig_12795 39 . A G 14664.2 . AB=0.111524;ABP=355.62;AC=1;AF=0.0833333;AN=12;AO=31;CIGAR=2X;DP=569;DPB=569;DPRA=0;EPP=70.3259;EPPR=215.815;GTI=0;LEN=1;MEANALT=2.2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1242;QR=3887;RO=98;RPL=0;RPP=70.3259;RPPR=215.815;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=98;SRP=215.815;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:27:0,3,24:0:0:3,24:122,965:-89.9897,-79.9259,-79.0229,-10.4694,0,-3.24468 0|0:96:33,14,49:33:1314:14,49:567,1980:-153.3,-116.48,-220.461,0,-61.4379,-93.443 0|0:59:22,9,28:22:876:9,28:367,1119:-85.5347,-61.8766,-131.297,0,-41.8416,-63.6943 0|0:87:29,4,53:29:1139:4,53:160,2117:-165.637,-161.187,-253.659,0,-80.5009,-77.7272 0|0:135:0,1,134:0:0:1,134:26,5393:-484.931,-482.893,-482.592,-40.338,-38.0392,0 0|0:165:14,0,151:14:558:0,151:0,6056:-495.132,-499.346,-545.294,0,-46.3464,-0.890823 dDocent_Contig_12796 43 . T A 660.974 . AB=0.174312;ABP=203.862;AC=3;AF=0.25;AN=12;AO=46;CIGAR=1X;DP=424;DPB=424;DPRA=1.21333;EPP=102.898;EPPR=823.827;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.746;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.456522;PAIREDR=0.449735;PAO=0;PQA=0;PQR=0;PRO=0;QA=1829;QR=15143;RO=378;RPL=0;RPP=102.898;RPPR=823.827;RPR=46;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=378;SRP=823.827;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:45,9:45:1819:9:357:-16.2373,0,-147.661 0/0:81:75,6:75:2968:6:241:0,-2.31713,-244.216 0/0:60:60,0:60:2391:0:0:0,-18.0618,-214.02 0/0:65:63,2:63:2530:2:78:0,-12.1636,-220.435 0/1:66:51,15:51:2048:15:591:-33.6595,0,-164.64 0/1:98:84,14:84:3387:14:562:-21.4224,0,-275.368 dDocent_Contig_12797 7 . A T 3365.98 . AB=0.0360206;ABP=1093.15;AC=1;AF=0.0833333;AN=12;AO=21;CIGAR=1X3M1X;DP=753;DPB=753;DPRA=0;EPP=48.6112;EPPR=763.123;GTI=0;LEN=1;MEANALT=7;MQM=60;MQMR=60;NS=6;NUMALT=7;ODDS=0;PAIRED=0.428571;PAIREDR=0.662011;PAO=0;PQA=0;PQR=0;PRO=0;QA=808;QR=13598;RO=358;RPL=0;RPP=48.6112;RPPR=780.397;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=356;SRP=763.123;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:68:33,0,9,7,3,5,0,9:33:1267:0,9,7,3,5,0,9:0,344,266,121,179,0,319:-18.2953,-28.2293,-132.238,0,-104.011,-101.302,-6.41283,-110.423,-82.1956,-108.316,-18.2781,-122.288,-94.061,-100.473,-121.385,-13.6746,-117.682,-89.4553,-95.8672,-107.732,-116.177,-28.2293,-132.238,-104.011,-110.423,-122.288,-117.682,-132.238,-2.26168,-106.267,-78.0407,-84.4525,-96.3175,-91.712,-106.267,-103.558 0|0:139:72,0,6,17,9,11,0,19:72:2719:0,6,17,9,11,0,19:0,232,659,357,426,0,715:-36.8714,-58.5455,-281.395,-39.489,-262.339,-260.532,-4.40254,-227.252,-208.195,-222.135,-29.1578,-252.008,-232.952,-197.865,-249.299,-23.5866,-246.436,-227.379,-192.293,-217.049,-243.125,-58.5455,-281.395,-262.339,-227.252,-252.008,-246.436,-281.395,0,-222.847,-203.79,-168.704,-193.46,-187.888,-222.847,-217.127 0|0:103:50,0,1,5,4,14,0,26:50:1906:0,1,5,4,14,0,26:0,39,192,145,557,0,1026:-69.361,-84.4125,-240.762,-81.2066,-237.556,-237.255,-68.6519,-225.001,-221.795,-223.496,-72.5787,-228.927,-225.721,-213.166,-227.723,-38.5777,-194.929,-191.723,-179.168,-183.094,-190.715,-84.4125,-240.762,-237.556,-225.001,-228.927,-194.929,-240.762,0,-156.354,-153.148,-140.593,-144.519,-110.519,-156.354,-148.527 0|0:166:71,0,3,17,14,18,0,39:71:2693:0,3,17,14,18,0,39:0,116,644,557,708,0,1506:-102.279,-123.652,-344.463,-114.124,-334.934,-334.031,-70.8549,-291.664,-282.136,-286.547,-77.7891,-298.601,-289.072,-245.802,-294.386,-65.5542,-286.365,-276.837,-233.567,-240.503,-280.947,-123.652,-344.463,-334.934,-291.664,-298.601,-286.365,-344.463,0,-220.809,-211.281,-168.011,-174.946,-162.711,-220.809,-209.069 0|0:107:46,8,2,18,18,0,1,12:46:1757:8,2,18,18,0,1,12:310,77,682,699,0,40,428:-43.4811,-31.8589,-173.614,-51.0058,-169.699,-194.566,-1.41355,-120.108,-139.254,-140.158,0,-118.696,-137.842,-88.2505,-138.746,-57.3285,-176.022,-195.168,-145.577,-144.165,-201.491,-54.033,-172.727,-191.873,-142.281,-140.87,-198.195,-197.894,-22.4567,-141.148,-160.294,-110.703,-109.291,-166.617,-163.321,-163.004 0|0:170:86,0,0,12,32,3,10,22:86:3256:0,0,12,32,3,10,22:0,0,461,1258,121,395,826:-77.5296,-103.418,-370.344,-103.418,-370.344,-370.344,-65.5745,-332.5,-332.5,-328.887,0,-266.927,-266.927,-229.082,-257.294,-93.4434,-360.369,-360.369,-322.525,-256.952,-359.466,-70.9146,-337.841,-337.841,-299.996,-234.423,-327.866,-334.83,-35.7838,-302.706,-302.706,-264.862,-199.289,-292.732,-270.203,-296.084 dDocent_Contig_12798 10 . G A 2498.54 . AB=0.344086;ABP=61.9202;AC=6;AF=0.5;AN=12;AO=96;CIGAR=1X;DP=279;DPB=279;DPRA=0;EPP=211.472;EPPR=400.39;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.197917;PAIREDR=0.448087;PAO=0;PQA=0;PQR=0;PRO=0;QA=3812;QR=7333;RO=183;RPL=0;RPP=211.472;RPPR=400.39;RPR=96;RUN=1;SAF=96;SAP=211.472;SAR=0;SRF=183;SRP=400.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:60:48,12:48:1904:12:480:-25.4892,0,-153.505 0/1:44:38,6:38:1526:6:225:-7.3621,0,-124.334 0/1:31:27,4:27:1096:4:160:-5.4515,0,-89.5925 0/1:56:46,10:46:1830:10:398:-19.3191,0,-148.052 0/1:39:16,23:16:650:23:907:-70.1957,0,-47.0928 0/1:49:8,41:8:327:41:1642:-133.259,0,-15.0496 dDocent_Contig_12800 16 . T G 6630.6 . AB=0.5363;ABP=7.89738;AC=5;AF=0.416667;AN=12;AO=229;CIGAR=1X;DP=555;DPB=555;DPRA=0.667188;EPP=500.277;EPPR=710.91;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8885;QR=12622;RO=326;RPL=0;RPP=500.277;RPPR=710.91;RPR=229;RUN=1;SAF=229;SAP=500.277;SAR=0;SRF=326;SRP=710.91;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:62:22,40:22:858:40:1543:-120.459,0,-58.8699 0/1:70:31,39:31:1221:39:1514:-115.445,0,-89.1012 0/1:33:5,28:5:192:28:1095:-88.9099,0,-7.71327 0/1:181:73,108:73:2814:108:4191:-322.731,0,-198.918 0/0:128:128,0:128:4958:0:0:0,-38.5318,-446.186 0/1:81:67,14:67:2579:14:542:-24.7374,0,-207.894 dDocent_Contig_12801 98 . N G 48.4578 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=51;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:51:-4.84469,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12803 48 . A T 2410.19 . AB=0.348754;ABP=58.8426;AC=4;AF=0.4;AN=10;AO=98;CIGAR=1X;DP=379;DPB=379;DPRA=0.716837;EPP=215.815;EPPR=604.539;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3685;QR=10919;RO=281;RPL=0;RPP=215.815;RPPR=604.539;RPR=98;RUN=1;SAF=98;SAP=215.815;SAR=0;SRF=281;SRP=613.194;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:90:65,25:65:2559:25:926:-56.5564,0,-203.363 0/0:98:98,0:98:3744:0:0:0,-29.5009,-337.011 0/1:96:73,23:73:2869:23:869:-49.6304,0,-229.438 0/1:91:43,48:43:1669:48:1813:-136.028,0,-123.059 ./.:.:.:.:.:.:.:. 0/1:4:2,2:2:78:2:77:-6.10502,0,-6.19918 dDocent_Contig_12804 20 . G A 253.051 . AB=0.110063;ABP=422.992;AC=2;AF=0.166667;AN=12;AO=85;CIGAR=1X;DP=1132;DPB=1132;DPRA=0;EPP=187.585;EPPR=2246.14;GTI=0;LEN=1;MEANALT=1.66667;MQM=54.5294;MQMR=54.2488;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.729412;PAIREDR=0.540174;PAO=0;PQA=0;PQR=0;PRO=0;QA=3393;QR=40608;RO=1033;RPL=0;RPP=187.585;RPPR=2246.14;RPR=85;RUN=1;SAF=85;SAP=187.585;SAR=0;SRF=1033;SRP=2246.14;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:149:131,16:131:5162:16:638:-10.9494,0,-395.139 0/0:259:243,15:243:9488:15:589:0,-31.0258,-744.327 0/0:163:144,16:144:5673:16:649:0,-3.4945,-426.36 0/0:288:265,15:265:10396:15:600:0,-30.3581,-823.98 0/0:104:100,4:100:3958:4:160:0,-16.5233,-316.448 0/1:169:150,19:150:5931:19:757:-17.5775,0,-467.251 dDocent_Contig_12807 85 . T A 401.18 . AB=0.206612;ABP=93.4764;AC=3;AF=0.25;AN=12;AO=25;CIGAR=1X;DP=153;DPB=153;DPRA=3.78125;EPP=57.2971;EPPR=278.787;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=878;QR=4365;RO=127;RPL=25;RPP=57.2971;RPPR=278.787;RPR=0;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=127;SRP=278.787;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:2:2,0:2:68:0:0:0,-0.60206,-6.45771 0/0:7:7,0:7:224:0:0:0,-2.10721,-20.4728 0/1:10:9,1:9:305:1:35:-0.488329,0,-24.7686 0/0:23:23,0:23:785:0:0:0,-6.92369,-70.9634 0/1:50:42,8:42:1446:8:278:-10.3048,0,-115.381 0/1:61:44,16:44:1537:16:565:-33.0327,0,-120.481 dDocent_Contig_12808 1 . N G 67.4314 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=71;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:71:-6.74206,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12809 10 . C G 393.617 . AB=0.192308;ABP=88.5329;AC=2;AF=0.166667;AN=12;AO=21;CIGAR=1X;DP=279;DPB=279;DPRA=1.08209;EPP=48.6112;EPPR=563.25;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.930233;PAO=0;PQA=0;PQR=0;PRO=0;QA=854;QR=10376;RO=258;RPL=0;RPP=48.6112;RPPR=563.25;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=258;SRP=563.25;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1642:0:0:0,-12.3422,-148.01 0/1:57:47,10:47:1872:10:407:-19.8319,0,-151.524 0/1:47:37,10:37:1480:10:406:-22.7516,0,-119.289 0/0:41:40,1:40:1620:1:41:0,-8.24766,-141.933 0/0:41:41,0:41:1653:0:0:0,-12.3422,-148.992 0/0:52:52,0:52:2109:0:0:0,-15.6536,-189.981 dDocent_Contig_12810 107 . N A 744.325 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=23;CIGAR=1X;DP=23;DPB=23;DPRA=0;EPP=52.9542;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=805;QR=0;RO=0;RPL=0;RPP=52.9542;RPPR=0;RPR=23;RUN=1;SAF=0;SAP=52.9542;SAR=23;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:177:-16.277,-1.50515,0 1/1:10:0,10:0:0:10:350:-31.8373,-3.0103,0 1/1:7:0,7:0:0:7:242:-22.1172,-2.10721,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:36:-3.59827,-0.30103,0 dDocent_Contig_12811 186 . T C 240.646 . AB=0.30303;ABP=14.1309;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=87;DPB=87;DPRA=1.22222;EPP=24.725;EPPR=170.214;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.844156;PAO=0;PQA=0;PQR=0;PRO=0;QA=405;QR=3062;RO=77;RPL=10;RPP=24.725;RPPR=170.214;RPR=0;RUN=1;SAF=0;SAP=24.725;SAR=10;SRF=0;SRP=170.214;SRR=77;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:15:13,2:13:514:2:81:-3.17028,0,-42.0899 0/0:20:20,0:20:808:0:0:0,-6.0206,-73.037 0/0:29:29,0:29:1145:0:0:0,-8.72987,-103.33 0/1:18:10,8:10:396:8:324:-24.1109,0,-30.5747 0/0:4:4,0:4:161:0:0:0,-1.20412,-14.8749 0/0:1:1,0:1:38:0:0:0,-0.30103,-3.79727 dDocent_Contig_12813 15 . C T 1115.19 . AB=0.213333;ABP=163.612;AC=6;AF=0.5;AN=12;AO=48;CIGAR=1X3M;DP=245;DPB=245;DPRA=0;EPP=107.241;EPPR=378.675;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.604167;PAIREDR=0.410405;PAO=0;PQA=0;PQR=0;PRO=0;QA=1883;QR=6784;RO=173;RPL=0;RPP=107.241;RPPR=378.675;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=173;SRP=378.675;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:20:16,4,0:16:626:4,0:158,0:-8.58005,0,-50.656,-13.3965,-51.8601,-64.8628 0|1:44:33,6,4:33:1296:6,4:228,160:-8.75237,0,-104.78,-5.49953,-93.4056,-110.896 0|1:27:14,7,6:14:555:7,6:246,240:-15.7731,0,-43.5738,-0.195085,-25.9099,-44.1023 0|1:55:37,5,12:37:1458:5,12:198,471:-27.6281,-22.4629,-140.923,0,-103.69,-116.375 0|1:49:38,0,11:38:1488:0,11:0,436:-24.8443,-36.2834,-158.631,0,-122.742,-119.431 0|1:50:35,0,15:35:1361:0,15:0,576:-37.1187,-47.6547,-159.494,0,-112.224,-107.709 dDocent_Contig_12814 40 . C G 123.871 . AB=0.214286;ABP=22.8638;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=176;DPB=176;DPRA=0.945946;EPP=16.0391;EPPR=372.161;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.847059;PAO=0;PQA=0;PQR=0;PRO=0;QA=244;QR=6795;RO=170;RPL=0;RPP=16.0391;RPPR=372.161;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=170;SRP=372.161;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:38,0:38:1512:0:0:0,-11.4391,-136.313 0/0:42:42,0:42:1692:0:0:0,-12.6433,-152.498 0/0:15:15,0:15:601:0:0:0,-4.51545,-54.4285 0/1:28:22,6:22:873:6:244:-13.91,0,-70.4467 0/0:22:22,0:22:891:0:0:0,-6.62266,-80.4938 0/0:31:31,0:31:1226:0:0:0,-9.33193,-110.609 dDocent_Contig_12815 53 . G T 338.624 . AB=0.228571;ABP=47.8047;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=4X;DP=148;DPB=148;DPRA=1.34921;EPP=39.9253;EPPR=287.473;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.941176;PAIREDR=0.923664;PAO=0;PQA=0;PQR=0;PRO=0;QA=678;QR=4979;RO=131;RPL=17;RPP=39.9253;RPPR=287.473;RPR=0;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=131;SRP=287.473;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:15:14,1:14:539:1:40:0,-0.519771,-44.859 0|1:36:31,5:31:1175:5:201:-7.63402,0,-95.2055 0|0:24:24,0:24:927:0:0:0,-7.22472,-83.7451 0|1:34:23,11:23:861:11:437:-29.45,0,-67.5722 0|0:15:15,0:15:576:0:0:0,-4.51545,-52.1806 0|0:24:24,0:24:901:0:0:0,-7.22472,-81.4042 dDocent_Contig_12816 25 . C T 435.729 . AB=0.238095;ABP=53.0576;AC=2;AF=0.166667;AN=12;AO=44;CIGAR=1X;DP=475;DPB=475;DPRA=7.16129;EPP=98.5551;EPPR=938.915;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1740;QR=17283;RO=431;RPL=0;RPP=98.5551;RPPR=938.915;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=431;SRP=938.915;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:14,10:14:568:10:400:-29.1341,0,-44.2357 0/0:19:19,0:19:766:0:0:0,-5.71957,-69.2616 0/0:12:12,0:12:486:0:0:0,-3.61236,-44.0914 0/1:60:50,10:50:1991:10:393:-17.6607,0,-161.323 0/0:195:184,11:184:7372:11:442:0,-18.5647,-622.97 0/0:165:152,13:152:6100:13:505:0,-3.87791,-502.964 dDocent_Contig_12817 15 . T A 25448 . AB=0.842315;ABP=512.934;AC=8;AF=0.666667;AN=12;AO=769;CIGAR=1X;DP=851;DPB=851;DPRA=0;EPP=1672.87;EPPR=181.071;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.992198;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=30162;QR=3219;RO=82;RPL=0;RPP=1672.87;RPPR=181.071;RPR=769;RUN=1;SAF=769;SAP=1672.87;SAR=0;SRF=82;SRP=181.071;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:80:22,58:22:867:58:2265:-179.939,0,-54.2573 0/1:164:24,140:24:922:140:5476:-443.338,0,-33.9084 0/1:92:12,80:12:468:80:3106:-251.946,0,-14.7671 0/1:165:21,144:21:842:144:5708:-463.885,0,-26.425 1/1:144:0,144:0:0:144:5628:-506.39,-43.3483,0 1/1:206:3,203:3:120:203:7979:-706.529,-50.8245,0 dDocent_Contig_12818 29 . A C 711.256 . AB=0.3375;ABP=21.3592;AC=2;AF=0.166667;AN=12;AO=28;CIGAR=1X;DP=137;DPB=137;DPRA=2.2619;EPP=63.8115;EPPR=239.701;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1127;QR=4331;RO=109;RPL=0;RPP=63.8115;RPPR=239.701;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=109;SRP=239.701;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:45:31,14:31:1226:14:558:-37.0167,0,-97.0705 0/1:35:22,13:22:877:13:528:-37.3305,0,-68.7033 0/0:15:14,1:14:542:1:41:0,-0.420883,-45.0231 0/0:19:19,0:19:765:0:0:0,-5.71957,-69.1716 0/0:13:13,0:13:521:0:0:0,-3.91339,-47.2356 0/0:10:10,0:10:400:0:0:0,-3.0103,-36.3588 dDocent_Contig_12820 10 . C A 1845.67 . AB=0.103448;ABP=82.2316;AC=6;AF=0.5;AN=12;AO=6;CIGAR=1X5M;DP=200;DPB=225.333;DPRA=0;EPP=16.0391;EPPR=259.244;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=245;QR=4616;RO=118;RPL=0;RPP=16.0391;RPPR=259.244;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=118;SRP=259.244;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:47:26,21,0,0:26:1015:21,0,0:824,0,0:-60.3283,0,-77.5021,-68.1551,-83.8237,-151.588,-68.1551,-83.8237,-151.588,-151.588 0|1:26:19,6,1,0:19:741:6,1,0:236,40,0:-13.6881,0,-59.0924,-16.1117,-57.603,-76.7162,-19.4077,-60.8986,-77.0172,-80.3126 0|1:24:21,3,0,0:21:813:3,0,0:121,0,0:-4.05548,0,-66.2629,-10.3771,-67.166,-77.1422,-10.3771,-67.166,-77.1422,-77.1422 0|1:45:25,16,4,0:25:994:16,4,0:636,161,0:-44.8339,0,-77.0181,-39.0893,-68.5646,-119.724,-52.3597,-81.8346,-120.928,-134.198 0|1:43:21,20,0,2:21:817:20,0,2:784,0,82:-58.1272,0,-61.0958,-64.4489,-67.1164,-131.582,-57.6791,-60.3464,-124.813,-124.211 0|1:15:6,5,0,4:6:236:5,0,4:201,0,163:-14.755,0,-17.8987,-16.5612,-19.4038,-35.969,-3.11144,-5.95088,-22.519,-21.3149 dDocent_Contig_12823 15 . A G 92.2333 . AB=0.227273;ABP=17.2236;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=327;DPB=327;DPRA=0.945946;EPP=22.5536;EPPR=693.539;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=347;QR=12542;RO=318;RPL=0;RPP=22.5536;RPPR=693.539;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=318;SRP=693.539;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:40,0:40:1573:0:0:0,-12.0412,-141.808 0/0:118:118,0:118:4652:0:0:0,-35.5215,-418.608 0/0:49:49,0:49:1946:0:0:0,-14.7505,-175.343 0/0:83:79,4:79:3123:4:158:0,-10.3852,-266.551 0/0:15:15,0:15:581:0:0:0,-4.51545,-52.6182 0/1:22:17,5:17:667:5:189:-10.7462,0,-53.7381 dDocent_Contig_12824 42 . T G 475.747 . AB=0.548387;ABP=3.64073;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=141;DPB=141;DPRA=0.563636;EPP=39.9253;EPPR=272.273;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.882353;PAIREDR=0.629032;PAO=0;PQA=0;PQR=0;PRO=0;QA=660;QR=4804;RO=124;RPL=0;RPP=39.9253;RPPR=272.273;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=124;SRP=272.273;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:634:0:0:0,-4.81648,-57.3964 0/0:26:26,0:26:989:0:0:0,-7.82678,-89.3138 0/0:33:33,0:33:1276:0:0:0,-9.93399,-115.112 0/0:35:35,0:35:1353:0:0:0,-10.536,-122.041 0/1:7:5,2:5:202:2:79:-5.39042,0,-16.4549 0/1:24:9,15:9:350:15:581:-45.4061,0,-24.6351 dDocent_Contig_12826 10 . A T 377.538 . AB=0.131579;ABP=271.816;AC=1;AF=0.0833333;AN=12;AO=39;CIGAR=1X;DP=923;DPB=923;DPRA=2.10774;EPP=87.6977;EPPR=1922.59;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.986425;PAO=0;PQA=0;PQR=0;PRO=0;QA=1562;QR=35161;RO=884;RPL=0;RPP=87.6977;RPPR=1922.59;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=884;SRP=1922.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:73:73,0:73:2886:0:0:0,-21.9752,-259.849 0/0:137:137,0:137:5433:0:0:0,-41.2411,-488.822 0/0:87:87,0:87:3451:0:0:0,-26.1896,-310.627 0/0:122:117,5:117:4646:5:203:0,-18.0726,-399.42 0/1:228:198,30:198:7855:30:1196:-39.2766,0,-637.909 0/0:276:272,4:272:10890:4:163:0,-68.0258,-964.322 dDocent_Contig_12827 12 . T C 4373.02 . AB=0.268477;ABP=311.697;AC=4;AF=0.333333;AN=12;AO=178;CIGAR=1X;DP=669;DPB=669;DPRA=55.25;EPP=389.532;EPPR=1069.2;GTI=0;LEN=1;MEANALT=1;MQM=59.8483;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.994382;PAIREDR=0.96945;PAO=0;PQA=0;PQR=0;PRO=0;QA=7156;QR=19636;RO=491;RPL=0;RPP=389.532;RPPR=1069.2;RPR=178;RUN=1;SAF=178;SAP=389.532;SAR=0;SRF=491;SRP=1069.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:109:81,28:81:3226:28:1132:-69.3482,0,-257.598 0/1:155:121,34:121:4842:34:1375:-77.3451,0,-389.011 0/1:225:176,49:176:7054:49:1944:-107.426,0,-566.768 0/1:174:107,67:107:4277:67:2705:-190.404,0,-332.502 0/0:4:4,0:4:158:0:0:0,-1.20412,-14.5999 0/0:2:2,0:2:79:0:0:0,-0.60206,-7.49724 dDocent_Contig_12828 10 . A G 862.463 . AB=0.088;ABP=187.308;AC=0;AF=0;AN=12;AO=16;CIGAR=1X3M1X;DP=289;DPB=289;DPRA=4.57143;EPP=37.7539;EPPR=495.935;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.8125;PAIREDR=0.947137;PAO=0;PQA=0;PQR=0;PRO=0;QA=614;QR=8948;RO=227;RPL=0;RPP=37.7539;RPPR=495.935;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=227;SRP=495.935;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:28:23,0,5:23:914:0,5:0,191:-8.62368,-15.5474,-90.8189,0,-75.6469,-74.1418 0|0:55:43,0,12:43:1700:0,12:0,483:-27.2647,-40.209,-180.101,0,-140.292,-136.68 0|0:14:14,0,0:14:550:0,0:0,0:0,-4.21442,-49.8426,-4.21442,-49.8426,-49.8426 0|0:61:33,9,19:33:1290:9,19:344,775:-54.0248,-35.743,-139.074,0,-77.8354,-100.338 0|0:64:55,2,6:55:2180:2,6:78,243:-3.55289,-13.6917,-192.559,0,-173.122,-177.728 0|0:67:59,5,3:59:2314:5,3:192,121:0,-2.01247,-190.788,-7.77933,-182.318,-197.175 dDocent_Contig_12830 23 . C T 40.4639 . AB=0.128205;ABP=49.8362;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=361;DPB=361;DPRA=0.60559;EPP=13.8677;EPPR=776.054;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=185;QR=13934;RO=356;RPL=0;RPP=13.8677;RPPR=776.054;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=356;SRP=776.054;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:39:34,5:34:1317:5:185:-5.2682,0,-107.051 0/0:47:47,0:47:1854:0:0:0,-14.1484,-167.074 0/0:11:11,0:11:425:0:0:0,-3.31133,-38.59 0/0:71:71,0:71:2816:0:0:0,-21.3731,-253.561 0/0:146:146,0:146:5692:0:0:0,-43.9504,-512.137 0/0:47:47,0:47:1830:0:0:0,-14.1484,-164.904 dDocent_Contig_12831 1 . N G 75.9287 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=80;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:80:-7.59179,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12832 72 . A T 101.829 . AB=0.5;ABP=3.0103;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=139;DPB=139;DPRA=0.895833;EPP=16.0391;EPPR=289.645;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.893939;PAO=0;PQA=0;PQR=0;PRO=0;QA=194;QR=4283;RO=132;RPL=6;RPP=16.0391;RPPR=289.645;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=132;SRP=289.645;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:462:0:0:0,-4.21442,-41.8978 0/0:10:10,0:10:330:0:0:0,-3.0103,-30.0213 0/0:26:26,0:26:830:0:0:0,-7.82678,-74.996 0/0:46:46,0:46:1492:0:0:0,-13.8474,-134.564 0/0:33:31,1:31:1027:1:34:0,-6.43899,-89.4595 0/1:10:5,5:5:142:5:160:-11.7058,0,-10.0502 dDocent_Contig_12833 9 . C T 2736.79 . AB=0.267327;ABP=145.489;AC=7;AF=0.583333;AN=12;AO=110;CIGAR=1X;DP=334;DPB=334;DPRA=0;EPP=241.872;EPPR=480.773;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.5446;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.986607;PAO=0;PQA=0;PQR=0;PRO=0;QA=4217;QR=8663;RO=224;RPL=0;RPP=241.872;RPPR=489.42;RPR=110;RUN=1;SAF=110;SAP=241.872;SAR=0;SRF=223;SRP=480.773;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:49:40,9:40:1541:9:342:-16.3855,0,-124.208 0/1:70:57,13:57:2209:13:490:-23.368,0,-177.956 0/1:77:55,22:55:2123:22:849:-53.5528,0,-168.112 0/1:92:63,29:63:2439:29:1112:-72.6877,0,-192.016 1/1:31:2,29:2:78:29:1114:-93.1585,-1.92846,0 0/1:15:7,8:7:273:8:310:-23.7483,0,-15.4902 dDocent_Contig_12834 28 . G A 67.0174 . AB=0.126761;ABP=88.9211;AC=4;AF=0.333333;AN=12;AO=11;CIGAR=1X;DP=117;DPB=117;DPRA=1.03158;EPP=26.8965;EPPR=233.186;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.971698;PAO=0;PQA=0;PQR=0;PRO=0;QA=447;QR=4167;RO=106;RPL=0;RPP=26.8965;RPPR=233.186;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=106;SRP=233.186;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:7:5,2:5:194:2:81:-5.57852,0,-15.7243 0/1:26:23,3:23:886:3:122:-3.54571,0,-72.2174 0/1:16:14,2:14:552:2:80:-2.7751,0,-45.2049 0/1:22:20,2:20:787:2:82:-1.15702,0,-64.5213 0/0:27:25,2:25:993:2:82:0,-0.348132,-81.8879 0/0:19:19,0:19:755:0:0:0,-5.71957,-68.2724 dDocent_Contig_12835 54 . A G 41.1467 . AB=0.105691;ABP=169.119;AC=2;AF=0.166667;AN=12;AO=19;CIGAR=1X;DP=384;DPB=384;DPRA=1.21429;EPP=44.2683;EPPR=795.598;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.421053;PAIREDR=0.539726;PAO=0;PQA=0;PQR=0;PRO=0;QA=708;QR=13607;RO=365;RPL=11;RPP=4.03889;RPPR=52.276;RPR=8;RUN=1;SAF=11;SAP=4.03889;SAR=8;SRF=228;SRP=52.276;SRR=137;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:45:45,0:45:1676:0:0:0,-13.5463,-151.094 0/1:77:69,8:69:2542:8:299:-4.08241,0,-205.797 0/1:46:41,5:41:1529:5:186:-3.24942,0,-124.023 0/0:75:71,4:71:2675:4:152:0,-8.52984,-226.875 0/0:67:67,0:67:2496:0:0:0,-20.169,-224.822 0/0:74:72,2:72:2689:2:71:0,-15.5342,-235.438 dDocent_Contig_12836 146 . T C 285.501 . AB=0.217391;ABP=66.8327;AC=3;AF=0.25;AN=12;AO=26;CIGAR=1X;DP=228;DPB=228;DPRA=0.969231;EPP=59.4686;EPPR=441.648;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99505;PAO=0;PQA=0;PQR=0;PRO=0;QA=878;QR=7085;RO=202;RPL=0;RPP=59.4686;RPPR=441.648;RPR=26;RUN=1;SAF=0;SAP=59.4686;SAR=26;SRF=0;SRP=441.648;SRR=202;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:17:10,7:10:355:7:239:-16.7261,0,-27.1733 0/1:21:15,6:15:534:6:200:-12.0059,0,-42.0705 0/0:61:56,5:56:1948:5:171:0,-2.6362,-159.867 0/0:36:35,1:35:1234:1:35:0,-7.33845,-107.865 0/0:39:39,0:39:1384:0:0:0,-11.7402,-124.853 0/1:54:47,7:47:1630:7:233:-5.03988,0,-130.724 dDocent_Contig_12837 63 . A G 75.9648 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=3;CIGAR=1X;DP=620;DPB=620;DPRA=0.632696;EPP=9.52472;EPPR=1342.81;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=116;QR=24203;RO=617;RPL=3;RPP=9.52472;RPPR=1342.81;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=617;SRP=1342.81;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:171:171,0:171:6758:0:0:0,-51.4761,-607.957 0/0:147:146,1:146:5654:1:41:0,-40.1568,-504.634 0/0:146:146,0:146:5707:0:0:0,-43.9504,-513.478 0/0:153:153,0:153:6045:0:0:0,-46.0576,-543.838 0/0:1:1,0:1:39:0:0:0,-0.30103,-3.89656 1/1:2:0,2:0:0:2:75:-7.1188,-0.60206,0 dDocent_Contig_12839 18 . T A 214.398 . AB=0.217391;ABP=34.9215;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=333;DPB=333;DPRA=0.822034;EPP=26.8965;EPPR=702.224;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993789;PAO=0;PQA=0;PQR=0;PRO=0;QA=423;QR=12929;RO=322;RPL=0;RPP=26.8965;RPPR=702.224;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=322;SRP=702.224;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:36,0:36:1414:0:0:0,-10.8371,-127.506 0/1:46:36,10:36:1442:10:405:-22.9627,0,-116.184 0/0:51:50,1:50:2008:1:18:0,-13.5526,-179.103 0/0:102:102,0:102:4109:0:0:0,-30.7051,-369.763 0/0:43:43,0:43:1742:0:0:0,-12.9443,-156.99 0/0:55:55,0:55:2214:0:0:0,-16.5566,-199.421 dDocent_Contig_12841 16 . T A 1259.04 . AB=0.255435;ABP=98.6023;AC=7;AF=0.583333;AN=12;AO=53;CIGAR=1X;DP=190;DPB=190;DPRA=0;EPP=85.9769;EPPR=300.502;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.301887;PAIREDR=0.875912;PAO=0;PQA=0;PQR=0;PRO=0;QA=2093;QR=5520;RO=137;RPL=0;RPP=118.098;RPPR=300.502;RPR=53;RUN=1;SAF=49;SAP=85.9769;SAR=4;SRF=137;SRP=300.502;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:21,15:21:848:15:605:-43.9515,0,-65.7953 0/1:60:50,10:50:2037:10:404:-18.6578,0,-165.444 0/1:29:25,4:25:1010:4:156:-5.68508,0,-82.4629 0/1:45:38,7:38:1507:7:259:-10.1162,0,-122.324 1/1:6:0,6:0:0:6:240:-21.9738,-1.80618,0 0/1:14:3,11:3:118:11:429:-34.7416,0,-6.78716 dDocent_Contig_12842 11 . G A 5790.05 . AB=0.15873;ABP=66.7413;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=2X;DP=250;DPB=250;DPRA=0;EPP=26.8965;EPPR=133.299;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.983333;PAO=0;PQA=0;PQR=0;PRO=0;QA=440;QR=2312;RO=60;RPL=0;RPP=26.8965;RPPR=133.299;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=60;SRP=133.299;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:16:12,0,4:12:455:0,4:0,158:-9.78288,-13.3952,-50.6884,0,-37.6838,-36.4796 0|0:38:14,3,21:14:553:3,21:121,823:-63.4408,-57.6797,-102.284,0,-35.5243,-39.1781 0|1:25:12,7,5:12:452:7,5:278,201:-19.2696,0,-34.9097,-6.31683,-20.4467,-41.833 0|0:47:0,1,46:0:0:1,46:41,1847:-166.025,-162.64,-162.339,-13.8474,-10.0538,0 0|0:56:7,0,49:7:274:0,49:0,1960:-159.737,-161.844,-184.372,0,-22.9205,-8.17003 0|0:68:15,0,53:15:578:0,53:0,2114:-169.972,-174.487,-221.942,0,-47.8423,-31.8877 dDocent_Contig_12843 55 . T A 37.2914 . AB=0.108108;ABP=101.724;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=226;DPB=226;DPRA=1.51111;EPP=29.068;EPPR=467.705;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.593458;PAO=0;PQA=0;PQR=0;PRO=0;QA=448;QR=8070;RO=214;RPL=7;RPP=3.73412;RPPR=14.7403;RPR=5;RUN=1;SAF=7;SAP=3.73412;SAR=5;SRF=124;SRP=14.7403;SRR=90;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:38,0:38:1417:0:0:0,-11.4391,-127.804 0/0:62:58,4:58:2161:4:138:0,-5.90643,-181.951 0/1:40:35,5:35:1367:5:188:-5.24212,0,-111.253 0/1:34:31,3:31:1187:3:122:-1.13747,0,-96.8792 0/0:10:10,0:10:377:0:0:0,-3.0103,-34.2798 0/0:42:42,0:42:1561:0:0:0,-12.6433,-140.749 dDocent_Contig_12844 57 . T A 220.086 . AB=0;ABP=0;AC=2;AF=0.2;AN=10;AO=6;CIGAR=1X;DP=51;DPB=51;DPRA=0.533333;EPP=16.0391;EPPR=100.727;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=236;QR=1653;RO=45;RPL=6;RPP=16.0391;RPPR=100.727;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=45;SRP=100.727;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:265:0:0:0,-2.10721,-24.2093 0/0:19:19,0:19:684:0:0:0,-5.71957,-61.8762 0/0:11:11,0:11:419:0:0:0,-3.31133,-38.061 0/0:8:8,0:8:285:0:0:0,-2.40824,-25.9864 ./.:.:.:.:.:.:.:. 1/1:6:0,6:0:0:6:236:-21.6107,-1.80618,0 dDocent_Contig_12845 34 . C T 239.49 . AB=0.37037;ABP=6.95112;AC=2;AF=0.166667;AN=12;AO=25;CIGAR=1X;DP=548;DPB=548;DPRA=0;EPP=57.2971;EPPR=1121.39;GTI=0;LEN=1;MEANALT=1;MQM=59.8;MQMR=59.9656;NS=6;NUMALT=1;ODDS=0;PAIRED=0.24;PAIREDR=0.988528;PAO=0;PQA=0;PQR=0;PRO=0;QA=957;QR=20970;RO=523;RPL=0;RPP=57.2971;RPPR=1138.69;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=521;SRP=1121.39;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:104:99,5:99:3943:5:189:0,-13.937,-337.478 0/0:103:102,1:102:4121:1:30:0,-28.0065,-367.845 0/0:115:109,6:109:4356:6:236:0,-13.0065,-370.371 0/0:199:196,3:196:7862:3:118:0,-48.9025,-696.146 0/1:19:14,5:14:566:5:191:-11.8384,0,-45.5632 0/1:8:3,5:3:122:5:193:-15.3324,0,-8.96425 dDocent_Contig_12847 11 . G T 74.9744 . AB=0.15625;ABP=35.8538;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=117;DPB=117;DPRA=1.3913;EPP=16.0391;EPPR=244.044;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.702703;PAO=0;PQA=0;PQR=0;PRO=0;QA=244;QR=4430;RO=111;RPL=0;RPP=16.0391;RPPR=244.044;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=111;SRP=244.044;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:853:0:0:0,-6.62266,-77.0774 0/1:32:27,5:27:1084:5:203:-9.0201,0,-88.2151 0/0:39:39,0:39:1570:0:0:0,-11.7402,-141.533 0/0:16:15,1:15:603:1:41:0,-0.721913,-50.5127 0/0:4:4,0:4:157:0:0:0,-1.20412,-14.5064 0/0:4:4,0:4:163:0:0:0,-1.20412,-15.0584 dDocent_Contig_12848 76 . A G 96.0626 . AB=0.26087;ABP=14.4341;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=112;DPB=112;DPRA=1.29213;EPP=16.0391;EPPR=231.015;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=197;QR=3548;RO=105;RPL=6;RPP=16.0391;RPPR=231.015;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=105;SRP=231.015;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:26,0:26:873:0:0:0,-7.82678,-78.5298 0/0:16:16,0:16:553:0:0:0,-4.81648,-50.0975 0/0:7:7,0:7:242:0:0:0,-2.10721,-22.1177 0/1:23:17,6:17:580:6:197:-11.1291,0,-45.5997 0/0:7:7,0:7:238:0:0:0,-2.10721,-21.7529 0/0:32:32,0:32:1062:0:0:0,-9.63296,-95.8786 dDocent_Contig_12849 8 . T G 292.232 . AB=0.176471;ABP=95.7449;AC=1;AF=0.0833333;AN=12;AO=71;CIGAR=2X;DP=868;DPB=868;DPRA=0;EPP=157.185;EPPR=1668.53;GTI=0;LEN=1;MEANALT=2.83333;MQM=39.2817;MQMR=56.3859;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.183833;PAO=0;PQA=0;PQR=0;PRO=0;QA=2705;QR=29219;RO=767;RPL=0;RPP=157.185;RPPR=1668.53;RPR=71;RUN=1;SAF=71;SAP=157.185;SAR=0;SRF=767;SRP=1668.53;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:106:94,3,9:94:3563:3,9:113,345:0,-19.0468,-306.464,-2.23773,-281.294,-287.83 0|0:149:129,3,12:129:4918:3,12:109,443:0,-30.9636,-430.461,-4.26555,-396.821,-401.079 0|1:102:72,9,18:72:2751:9,18:350,693:-30.7461,-24.3087,-246.763,0,-197.056,-219.739 0|0:193:178,0,14:178:6735:0,14:0,530:0,-53.5833,-602.653,-13.9656,-563.008,-558.794 0|0:145:137,0,7:137:5237:0,7:0,269:0,-41.2411,-468.881,-21.6432,-449.418,-447.311 0|0:173:157,2,11:157:6015:2,11:77,425:0,-40.9451,-532.773,-17.0844,-503.194,-506.193 dDocent_Contig_12850 31 . G A 762.88 . AB=0.244604;ABP=81.7613;AC=2;AF=0.166667;AN=12;AO=44;CIGAR=1X;DP=421;DPB=421;DPRA=0.89404;EPP=98.5551;EPPR=821.655;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.992042;PAO=0;PQA=0;PQR=0;PRO=0;QA=1730;QR=14992;RO=377;RPL=0;RPP=98.5551;RPPR=821.655;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=377;SRP=821.655;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:74:68,6:68:2658:6:233:0,-0.939064,-218.012 0/1:60:50,10:50:2002:10:399:-18.2079,0,-162.311 0/1:79:55,24:55:2217:24:942:-61.3019,0,-175.914 0/0:74:74,0:74:2948:0:0:0,-22.2762,-265.421 0/0:77:77,0:77:3074:0:0:0,-23.1793,-276.747 0/0:57:53,4:53:2093:4:156:0,-2.7423,-174.139 dDocent_Contig_12851 51 . A T 1067.41 . AB=0.0547945;ABP=128.688;AC=0;AF=0;AN=12;AO=4;CIGAR=1M1X1M2X5M;DP=275;DPB=395;DPRA=0.474026;EPP=11.6962;EPPR=257.389;GTI=0;LEN=1;MEANALT=2;MQM=13.75;MQMR=34.3974;NS=6;NUMALT=5;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.986755;PAO=0;PQA=0;PQR=0;PRO=0;QA=55;QR=5864;RO=151;RPL=0;RPP=11.6962;RPPR=330.903;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=142;SRP=257.389;SRR=9;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:18:11,2,5,0,0,0:11:435:2,5,0,0,0:25,113,0,0,0:-4.1003,-6.30789,-30.7198,0,-24.0096,-23.6077,-7.41163,-31.3218,-25.1129,-32.4363,-7.41163,-31.3218,-25.1129,-32.4363,-32.4363,-7.41163,-31.3218,-25.1129,-32.4363,-32.4363,-32.4363 0|0:53:23,0,25,0,0,5:23:890:0,25,0,0,5:0,489,0,0,193:-22.7914,-29.7151,-92.325,0,-62.5295,-55.0037,-29.7151,-92.325,-62.5295,-92.325,-29.7151,-92.325,-62.5295,-92.325,-92.325,-14.9342,-77.5659,-47.7765,-77.5659,-77.5659,-76.0607 0|0:33:15,0,14,2,0,2:15:581:0,14,2,0,2:0,313,18,0,78:-15.6964,-20.2118,-56.5097,0,-36.3205,-32.1061,-19.7019,-55.9946,-35.8196,-55.3925,-20.2118,-56.5097,-36.3205,-55.9946,-56.5097,-14.2301,-50.5411,-30.35,-50.0262,-50.5411,-49.939 0|0:39:25,0,7,0,0,6:25:984:0,7,0,0,6:0,119,0,0,233:-2.69439,-10.2201,-75.9864,-3.5148,-69.2596,-67.1524,-10.2201,-75.9864,-69.2596,-75.9864,-10.2201,-75.9864,-69.2596,-75.9864,-75.9864,0,-65.799,-59.0818,-65.799,-65.799,-63.9928 0|0:55:14,2,39,0,0,0:14:546:2,39,0,0,0:30,1075,0,0,0:-70.6659,-73.3179,-110.419,0,-36.324,-26.1259,-74.8803,-111.021,-37.8661,-112.584,-74.8803,-111.021,-37.8661,-112.584,-112.584,-74.8803,-111.021,-37.8661,-112.584,-112.584,-112.584 0|0:77:63,0,7,0,4,0:63:2428:0,7,0,4,0:0,211,0,159,0:0,-18.9649,-177.568,-4.00482,-162.566,-160.459,-18.9649,-177.568,-162.566,-177.568,-6.92284,-165.543,-150.541,-165.543,-164.339,-18.9649,-177.568,-162.566,-177.568,-165.543,-177.568 dDocent_Contig_12853 38 . G A 3015.46 . AB=0.318059;ABP=109.682;AC=6;AF=0.5;AN=12;AO=118;CIGAR=1X;DP=371;DPB=371;DPRA=0;EPP=259.244;EPPR=552.393;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8261;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0;PAIREDR=0.940711;PAO=0;PQA=0;PQR=0;PRO=0;QA=4695;QR=10094;RO=253;RPL=0;RPP=259.244;RPPR=552.393;RPR=118;RUN=1;SAF=118;SAP=259.244;SAR=0;SRF=253;SRP=552.393;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:28,8:28:1112:8:323:-18.6015,0,-88.6043 0/1:42:36,6:36:1458:6:236:-8.96741,0,-118.82 0/1:58:33,25:33:1329:25:993:-72.2071,0,-102.41 0/1:62:46,16:46:1847:16:637:-38.9967,0,-147.773 0/1:91:57,34:57:2259:34:1363:-95.5346,0,-176.086 0/1:82:53,29:53:2089:29:1143:-78.4606,0,-163.502 dDocent_Contig_12854 37 . A G 215.272 . AB=0.120419;ABP=242.043;AC=2;AF=0.166667;AN=12;AO=28;CIGAR=1X;DP=464;DPB=464;DPRA=1.71345;EPP=63.8115;EPPR=949.772;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.642857;PAIREDR=0.552752;PAO=0;PQA=0;PQR=0;PRO=0;QA=1109;QR=17216;RO=436;RPL=0;RPP=63.8115;RPPR=949.772;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=436;SRP=949.772;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:34,0:34:1366:0:0:0,-10.235,-123.2 0/0:102:97,5:97:3810:5:203:0,-12.052,-324.28 0/0:64:64,0:64:2535:0:0:0,-19.2659,-228.281 0/0:73:73,0:73:2877:0:0:0,-21.9752,-259.022 0/1:80:70,10:70:2782:10:397:-12.0067,0,-226.415 0/1:111:98,13:98:3846:13:509:-12.7423,0,-312.739 dDocent_Contig_12855 60 . G A 529.086 . AB=0.1875;ABP=152.299;AC=3;AF=0.25;AN=12;AO=41;CIGAR=1X;DP=318;DPB=318;DPRA=10.4;EPP=92.0407;EPPR=593.682;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0243902;PAIREDR=0.394928;PAO=0;PQA=0;PQR=0;PRO=0;QA=1532;QR=10809;RO=276;RPL=41;RPP=92.0407;RPPR=602.337;RPR=0;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=275;SRP=593.682;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:67:56,11:56:2178:11:408:-16.8929,0,-176.027 0/0:72:68,3:68:2678:3:115:0,-10.8644,-230.484 0/0:64:59,5:59:2321:5:194:0,-1.43307,-191.22 0/1:100:80,20:80:3120:20:737:-36.5432,0,-250.769 0/0:6:6,0:6:240:0:0:0,-1.80618,-21.9751 0/1:9:7,2:7:272:2:78:-4.6942,0,-22.1355 dDocent_Contig_12856 19 . G A 5064.34 . AB=0.384134;ABP=58.8656;AC=6;AF=0.5;AN=12;AO=184;CIGAR=1X;DP=479;DPB=479;DPRA=0;EPP=402.561;EPPR=643.595;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9051;NS=6;NUMALT=1;ODDS=0;PAIRED=0.983696;PAIREDR=0.925424;PAO=0;PQA=0;PQR=0;PRO=0;QA=7336;QR=11734;RO=295;RPL=0;RPP=402.561;RPPR=643.595;RPR=184;RUN=1;SAF=184;SAP=402.561;SAR=0;SRF=295;SRP=643.595;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:64:38,26:38:1492:26:1029:-73.6387,0,-115.254 0/1:83:66,17:66:2617:17:690:-37.4436,0,-210.654 0/1:40:32,8:32:1275:8:300:-15.3049,0,-102.873 0/1:78:62,16:62:2465:16:631:-33.6405,0,-198.51 0/1:108:37,71:37:1486:71:2856:-224.628,0,-101.471 0/1:106:60,46:60:2399:46:1830:-132.999,0,-184.146 dDocent_Contig_12857 8 . T C 31.8816 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=3;CIGAR=1X1M1X1M2X2M1X1M3X1M1X;DP=147;DPB=147;DPRA=1.6092;EPP=9.52472;EPPR=296.159;GTI=0;LEN=1;MEANALT=1;MQM=26;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0.985185;PAO=0;PQA=0;PQR=0;PRO=0;QA=115;QR=5277;RO=135;RPL=0;RPP=9.52472;RPPR=296.159;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=135;SRP=296.159;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:11:11,0,0,0:11:429:0,0,0:0,0,0:0,-3.31133,-38.9627,-3.31133,-38.9627,-38.9627,-3.31133,-38.9627,-38.9627,-38.9627 0|0:25:18,2,0,3:18:703:2,0,3:80,0,122:-4.71075,-7.18646,-64.3951,-10.1293,-64.9972,-67.9726,0,-54.9307,-57.9044,-57.0013 0|0:20:18,2,0,0:18:700:2,0,0:80,0,0:0,-2.22873,-59.5372,-5.41854,-60.1392,-63.1106,-5.41854,-60.1392,-63.1106,-63.1106 0|0:28:28,0,0,0:28:1096:0,0,0:0,0,0:0,-8.42884,-98.9376,-8.42884,-98.9376,-98.9376,-8.42884,-98.9376,-98.9376,-98.9376 0|0:35:32,0,3,0:32:1251:0,3,0:0,115,0:0,-9.63296,-112.606,-3.32748,-106.569,-105.666,-9.63296,-112.606,-106.569,-112.606 0|0:28:28,0,0,0:28:1098:0,0,0:0,0,0:0,-8.42884,-99.1177,-8.42884,-99.1177,-99.1177,-8.42884,-99.1177,-99.1177,-99.1177 dDocent_Contig_12858 15 . T A 3491.4 . AB=0.038961;ABP=145.171;AC=0;AF=0;AN=12;AO=3;CIGAR=3M1X5M;DP=243;DPB=227.444;DPRA=0;EPP=9.52472;EPPR=178.9;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=122;QR=3156;RO=81;RPL=0;RPP=9.52472;RPPR=178.9;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=81;SRP=178.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:24:12,1,9,0,2,0:12:474:1,9,0,2,0:38,326,0,82,0:-22.9708,-23.4658,-62.1822,0,-35.8856,-36.2917,-26.5831,-62.4833,-39.0009,-65.5996,-19.8073,-55.7126,-32.2307,-58.8291,-58.227,-26.5831,-62.4833,-39.0009,-65.5996,-58.8291,-65.5996 0|0:32:16,5,6,2,3,0:16:622:5,6,2,3,0:184,233,81,118,0:-14.3302,-4.10939,-53.7158,0,-36.0768,-49.3112,-12.4647,-48.5406,-44.4367,-62.98,-9.43859,-45.5144,-41.4103,-53.875,-59.6525,-19.1467,-55.2209,-51.1174,-63.582,-60.5556,-70.2624 0|0:37:17,5,15,0,0,0:17:662:5,15,0,0,0:185,572,0,0,0:-41.8118,-31.7984,-84.7039,0,-39.2919,-49.9058,-46.9293,-86.209,-54.4212,-101.341,-46.9293,-86.209,-54.4212,-101.341,-101.341,-46.9293,-86.209,-54.4212,-101.341,-101.341,-101.341 0|0:45:13,2,25,1,2,0:13:503:2,25,1,2,0:72,916,41,78,0:-70.9953,-69.0356,-109.762,0,-35.4994,-33.8465,-71.5228,-106.979,-37.9854,-112.55,-68.4951,-103.951,-34.9575,-106.439,-109.222,-74.9087,-110.364,-41.3722,-112.851,-109.824,-116.236 0|0:53:12,0,35,0,3,3:12:470:0,35,0,3,3:0,1290,0,123,119:-101.835,-105.448,-144.1,0,-38.6408,-28.1047,-105.448,-144.1,-38.6408,-144.1,-95.2927,-133.946,-28.4857,-133.946,-133.043,-95.6503,-134.304,-28.8449,-134.304,-124.149,-133.4 0|0:52:11,0,36,0,3,2:11:425:0,36,0,3,2:0,1363,0,114,80:-108.418,-111.729,-146.637,0,-34.9047,-24.0676,-111.729,-146.637,-34.9047,-146.637,-102.382,-137.289,-25.5589,-137.289,-136.386,-105.138,-140.046,-28.3126,-140.046,-130.698,-139.444 dDocent_Contig_12859 32 . A T 38.9083 . AB=0.0961538;ABP=150.336;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=306;DPB=306;DPRA=1.25532;EPP=26.8965;EPPR=643.595;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99661;PAO=0;PQA=0;PQR=0;PRO=0;QA=445;QR=11796;RO=295;RPL=0;RPP=26.8965;RPPR=643.595;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=295;SRP=643.595;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:78:78,0:78:3127:0:0:0,-23.4803,-281.498 0/0:14:13,1:13:516:1:41:0,-0.119853,-42.6915 0/0:21:21,0:21:831:0:0:0,-6.32163,-75.1006 0/0:58:58,0:58:2307:0:0:0,-17.4597,-207.79 0/0:31:31,0:31:1252:0:0:0,-9.33193,-112.949 0/1:104:94,10:94:3763:10:404:-5.4131,0,-307.372 dDocent_Contig_12862 27 . T A 102.509 . AB=0.125;ABP=22.5536;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=18M1X7M;DP=179;DPB=178.962;DPRA=0.450704;EPP=7.35324;EPPR=354.789;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=80;QR=6335;RO=162;RPL=0;RPP=7.35324;RPPR=354.789;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=162;SRP=354.789;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:33:31,0,1,0:31:1200:0,1,0:0,27,0:0,-9.33193,-107.945,-7.27289,-105.82,-105.519,-9.33193,-107.945,-105.82,-107.945 0|0:30:28,0,2,0:28:1086:0,2,0:0,76,0:0,-8.42884,-97.6588,-1.81623,-91.4264,-90.8243,-8.42884,-97.6588,-91.4264,-97.6588 0|0:38:37,0,0,0:37:1454:0,0,0:0,0,0:0,-11.1381,-130.932,-11.1381,-130.932,-130.932,-11.1381,-130.932,-130.932,-130.932 0|0:41:36,0,2,0:36:1417:0,2,0:0,78,0:0,-10.8371,-127.513,-4.34542,-121.101,-120.499,-10.8371,-127.513,-121.101,-127.513 0|0:21:16,5,0,0:16:636:5,0,0:185,0,0:-10.6854,0,-51.2563,-15.5019,-52.7614,-67.8871,-15.5019,-52.7614,-67.8871,-67.8871 0|1:16:14,0,0,2:14:542:0,0,2:0,0,80:-2.77531,-6.98973,-51.4993,-6.98973,-51.4993,-51.4993,0,-44.9076,-44.9076,-44.3055 dDocent_Contig_12863 33 . T C 3031.4 . AB=0.538462;ABP=3.84548;AC=6;AF=0.5;AN=12;AO=92;CIGAR=1X;DP=169;DPB=169;DPRA=1.29787;EPP=202.786;EPPR=170.214;GTI=0;LEN=1;MEANALT=1;MQM=59.9783;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.967391;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3608;QR=2812;RO=77;RPL=0;RPP=202.786;RPPR=170.214;RPR=92;RUN=1;SAF=92;SAP=202.786;SAR=0;SRF=77;SRP=170.214;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:39,0:39:1408:0:0:0,-11.7402,-126.998 0/1:34:13,21:13:483:21:835:-65.227,0,-33.5764 0/0:8:8,0:8:307:0:0:0,-2.40824,-27.9914 0/1:31:17,14:17:614:14:554:-40.8681,0,-46.2476 1/1:16:0,16:0:0:16:611:-55.3101,-4.81648,0 1/1:41:0,41:0:0:41:1608:-144.957,-12.3422,0 dDocent_Contig_12865 57 . G A 308.956 . AB=0.150327;ABP=165.502;AC=3;AF=0.25;AN=12;AO=30;CIGAR=1X;DP=308;DPB=308;DPRA=1.16889;EPP=68.1545;EPPR=606.68;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.866667;PAIREDR=0.521583;PAO=0;PQA=0;PQR=0;PRO=0;QA=1173;QR=11077;RO=278;RPL=30;RPP=68.1545;RPPR=606.68;RPR=0;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=278;SRP=606.68;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:51:48,3:48:1849:3:123:0,-3.88774,-155.151 0/0:59:55,4:55:2218:4:149:0,-3.99079,-186.012 0/1:54:44,10:44:1762:10:392:-19.3792,0,-142.543 0/0:45:45,0:45:1811:0:0:0,-13.5463,-163.2 0/1:46:41,5:41:1643:5:189:-3.52386,0,-134.254 0/1:53:45,8:45:1794:8:320:-13.2122,0,-145.718 dDocent_Contig_12866 9 . A C 40564.6 . AB=0.31418;ABP=1386.22;AC=4;AF=0.333333;AN=12;AO=1449;CIGAR=2X1M1X;DP=4612;DPB=4612;DPRA=0;EPP=3132.13;EPPR=3499.08;GTI=0;LEN=1;MEANALT=7.66667;MQM=48.0414;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.365079;PAIREDR=0.369565;PAO=0;PQA=0;PQR=0;PRO=0;QA=56800;QR=62760;RO=1610;RPL=0;RPP=3149.47;RPPR=3499.08;RPR=1449;RUN=1;SAF=1447;SAP=3132.13;SAR=2;SRF=1610;SRP=3499.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:722:320,198,181:320:12435:198,181:7765,7112:-491.254,0,-962.171,-8.19447,-442.396,-975.496 0|0:908:316,280,279:316:12316:280,279:11003,11141:-806.95,-74.3923,-1002.38,0,-184.606,-928.303 0|0:776:256,226,257:256:10039:226,257:8874,10264:-753.189,-154.583,-912.119,0,-149.911,-748.215 0|1:939:334,292,270:334:13062:292,270:11409,10679:-782.926,0,-986.02,-19.1778,-209.637,-1011.83 0|1:533:161,185,158:161:6237:185,158:7254,6255:-494.006,0,-456.656,-34.6571,-4.54126,-499.452 0|1:734:223,268,214:223:8671:268,214:10495,8556:-739.357,0,-631.859,-108.379,-14.4347,-756.505 dDocent_Contig_12867 24 . A T 90.6308 . AB=0.1;ABP=350.446;AC=2;AF=0.166667;AN=12;AO=32;CIGAR=1X;DP=542;DPB=542;DPRA=2.47802;EPP=72.4974;EPPR=1110.46;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.984314;PAO=0;PQA=0;PQR=0;PRO=0;QA=1236;QR=20294;RO=510;RPL=0;RPP=72.4974;RPPR=1110.46;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=510;SRP=1110.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:189:171,18:171:6807:18:699:-6.34776,0,-555.433 0/1:61:54,7:54:2153:7:266:-5.93716,0,-175.586 0/0:95:90,5:90:3604:5:194:0,-10.7657,-306.547 0/0:106:104,2:104:4128:2:77:0,-24.6,-364.184 0/0:30:30,0:30:1203:0:0:0,-9.0309,-108.544 0/0:61:61,0:61:2399:0:0:0,-18.3628,-216.052 dDocent_Contig_12868 15 . C T 39.2136 . AB=0.142857;ABP=26.2761;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=196;DPB=196;DPRA=0.882353;EPP=13.8677;EPPR=417.762;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.4;PAIREDR=0.366492;PAO=0;PQA=0;PQR=0;PRO=0;QA=205;QR=7622;RO=191;RPL=0;RPP=13.8677;RPPR=417.762;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=191;SRP=417.762;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:18,3:18:711:3:123:-5.14316,0,-57.9926 0/0:28:28,0:28:1113:0:0:0,-8.42884,-100.454 0/0:32:32,0:32:1287:0:0:0,-9.63296,-116.093 0/0:39:37,2:37:1479:2:82:0,-3.96049,-125.574 0/0:33:33,0:33:1322:0:0:0,-9.93399,-119.24 0/0:43:43,0:43:1710:0:0:0,-12.9443,-154.123 dDocent_Contig_12869 18 . A G 39.9417 . AB=0.125;ABP=42.0968;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=187;DPB=187;DPRA=0.888889;EPP=16.0391;EPPR=396.047;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=246;QR=7265;RO=181;RPL=0;RPP=16.0391;RPPR=396.047;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=181;SRP=396.047;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:31,0:31:1251:0:0:0,-9.33193,-112.858 0/1:32:28,4:28:1093:4:164:-5.51694,0,-89.0176 0/0:21:21,0:21:855:0:0:0,-6.32163,-77.2583 0/0:47:47,0:47:1902:0:0:0,-14.1484,-171.374 0/0:39:38,1:38:1522:1:41:0,-7.6456,-133.127 0/0:17:16,1:16:642:1:41:0,-1.02294,-54.0175 dDocent_Contig_12870 43 . T C 52.5304 . AB=0.115385;ABP=69.8248;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=247;DPB=247;DPRA=1.71429;EPP=24.725;EPPR=509;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.9;PAIREDR=0.632911;PAO=0;PQA=0;PQR=0;PRO=0;QA=409;QR=9378;RO=237;RPL=0;RPP=24.725;RPPR=509;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=237;SRP=517.649;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:37,0:37:1481:0:0:0,-11.1381,-133.535 0/0:62:58,4:58:2296:4:164:0,-3.51396,-191.658 0/0:28:28,0:28:1092:0:0:0,-8.42884,-98.5623 0/1:52:46,6:46:1796:6:245:-6.77591,0,-146.195 0/0:28:28,0:28:1112:0:0:0,-8.42884,-100.366 0/0:40:40,0:40:1601:0:0:0,-12.0412,-144.323 dDocent_Contig_12871 9 . A G 162.959 . AB=0.133333;ABP=125.626;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=830;DPB=830;DPRA=0.724138;EPP=33.4109;EPPR=1774.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=542;QR=31227;RO=816;RPL=0;RPP=33.4109;RPPR=1774.93;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=816;SRP=1774.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:105:91,14:91:3455:14:542:-17.5178,0,-279.479 0/0:182:182,0:182:6997:0:0:0,-54.7875,-629.596 0/0:160:160,0:160:6156:0:0:0,-48.1648,-553.973 0/0:160:160,0:160:6139:0:0:0,-48.1648,-552.446 0/0:77:77,0:77:2924:0:0:0,-23.1793,-263.331 0/0:146:146,0:146:5556:0:0:0,-43.9504,-500.022 dDocent_Contig_12872 33 . G C 68.7214 . AB=0.109375;ABP=172.657;AC=3;AF=0.25;AN=12;AO=16;CIGAR=1X;DP=251;DPB=251;DPRA=0.959302;EPP=37.7539;EPPR=513.306;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.625;PAIREDR=0.685106;PAO=0;PQA=0;PQR=0;PRO=0;QA=622;QR=9027;RO=235;RPL=0;RPP=37.7539;RPPR=513.306;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=235;SRP=513.306;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:38,4:38:1480:4:155:-1.68201,0,-120.817 0/0:37:35,2:35:1353:2:76:0,-3.92385,-114.83 0/1:50:45,5:45:1709:5:193:-2.68694,0,-138.989 0/0:49:49,0:49:1885:0:0:0,-14.7505,-169.881 0/0:37:37,0:37:1400:0:0:0,-11.1381,-126.26 0/1:36:31,5:31:1200:5:198:-7.36,0,-97.4482 dDocent_Contig_12873 1 . N G 337.085 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=350;QR=0;RO=0;RPL=0;RPP=22.5536;RPPR=0;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:37:-3.69783,-0.30103,0 1/1:5:0,5:0:0:5:200:-18.3801,-1.50515,0 1/1:2:0,2:0:0:2:72:-6.83591,-0.60206,0 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12874 10 . T C 625.147 . AB=0.259259;ABP=30.1939;AC=7;AF=0.583333;AN=12;AO=25;CIGAR=1X;DP=88;DPB=88;DPRA=0;EPP=57.2971;EPPR=139.813;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.888889;PAO=0;PQA=0;PQR=0;PRO=0;QA=990;QR=2498;RO=63;RPL=0;RPP=57.2971;RPPR=139.813;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=63;SRP=139.813;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:14,2:14:553:2:82:-2.9632,0,-45.2968 0/1:18:12,6:12:482:6:239:-16.4666,0,-38.3121 0/0:25:23,2:23:907:2:78:0,-0.122449,-74.5327 0/1:20:14,6:14:556:6:228:-14.8597,0,-44.3604 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 1/1:7:0,7:0:0:7:282:-25.7528,-2.10721,0 dDocent_Contig_12875 10 . T A 806.968 . AB=0.2375;ABP=98.7722;AC=4;AF=0.333333;AN=12;AO=39;CIGAR=1X;DP=235;DPB=235;DPRA=1.03684;EPP=87.6977;EPPR=428.619;GTI=0;LEN=1;MEANALT=1;MQM=58.1538;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0;PAIREDR=0.280612;PAO=0;PQA=0;PQR=0;PRO=0;QA=1540;QR=7875;RO=196;RPL=0;RPP=87.6977;RPPR=428.619;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=196;SRP=428.619;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:21,5:21:854:5:197:-10.2787,0,-69.3429 0/0:38:38,0:38:1512:0:0:0,-11.4391,-136.324 0/0:37:36,1:36:1451:1:41:0,-7.04354,-126.741 0/1:53:36,17:36:1435:17:667:-44.4052,0,-113.446 0/1:53:41,12:41:1653:12:472:-26.6052,0,-133.038 0/1:28:24,4:24:970:4:163:-6.62959,0,-79.1686 dDocent_Contig_12876 53 . T A 106.295 . AB=0.357143;ABP=5.49198;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=293;DPB=293;DPRA=0.250896;EPP=13.8677;EPPR=626.223;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=178;QR=11321;RO=287;RPL=5;RPP=13.8677;RPPR=626.223;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=287;SRP=626.223;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:3:3,0:3:118:0:0:0,-0.90309,-11.0022 0/0:16:16,0:16:636:0:0:0,-4.81648,-57.5769 0/0:14:14,0:14:559:0:0:0,-4.21442,-50.6533 0/1:14:9,5:9:347:5:178:-12.1523,0,-27.371 0/0:133:132,0:132:5209:0:0:0,-39.736,-468.62 0/0:113:113,0:113:4452:0:0:0,-34.0164,-400.635 dDocent_Contig_12877 11 . G A 99.0668 . AB=0.162162;ABP=39.6906;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=146;DPB=146;DPRA=1.28049;EPP=22.5536;EPPR=300.502;GTI=0;LEN=1;MEANALT=1;MQM=59.2222;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.888889;PAIREDR=0.956204;PAO=0;PQA=0;PQR=0;PRO=0;QA=367;QR=5420;RO=137;RPL=0;RPP=22.5536;RPPR=300.502;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=137;SRP=300.502;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:2:2,0:2:80:0:0:0,-0.60206,-7.59157 0/0:33:32,1:32:1280:1:41:0,-5.83942,-111.37 0/0:39:39,0:39:1549:0:0:0,-11.7402,-139.651 0/1:24:19,5:19:749:5:203:-11.4283,0,-60.5061 0/0:35:33,2:33:1313:2:82:0,-2.75637,-110.654 0/1:13:12,1:12:449:1:41:-0.16004,0,-36.8272 dDocent_Contig_12878 26 . A G 4624.3 . AB=0.193277;ABP=489.219;AC=1;AF=0.0833333;AN=12;AO=115;CIGAR=1X1M;DP=595;DPB=595;DPRA=0;EPP=252.73;EPPR=647.938;GTI=0;LEN=1;MEANALT=2.83333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=1.11022e-16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4555;QR=11790;RO=297;RPL=0;RPP=252.73;RPPR=647.938;RPR=115;RUN=1;SAF=115;SAP=252.73;SAR=0;SRF=297;SRP=647.938;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:68:34,0,25,9:34:1357:0,25,9:0,991,344:-71.3374,-81.5725,-193.333,0,-111.771,-104.245,-53.3616,-165.121,-83.56,-162.412 0|1:128:71,1,21,35:71:2850:1,21,35:40,833,1408:-94.6606,-112.739,-347.269,-47.4732,-279.009,-275.982,0,-231.539,-166.273,-224.298 0|0:49:26,1,15,7:26:1018:1,15,7:41,609,269:-42.4122,-46.8544,-130.244,0,-80.3132,-79.1824,-28.1655,-108.467,-61.6193,-109.744 0|0:89:53,2,20,14:53:2090:2,20,14:81,796,531:-49.5903,-59.0516,-230.405,0,-165.47,-165.942,-22.0304,-187.488,-128.444,-189.766 0|0:133:59,16,34,24:59:2336:16,34,24:629,1340,960:-92.461,-58.489,-245.925,0,-140.52,-182.017,-31.1434,-171.665,-113.175,-216.173 0|0:128:54,6,42,26:54:2139:6,42,26:243,1692,1043:-123.19,-119.408,-293.641,0,-156,-163.394,-53.5138,-209.514,-90.1036,-221.725 dDocent_Contig_12879 22 . T A 119.28 . AB=0.156863;ABP=55.1682;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=266;DPB=266;DPRA=0.931915;EPP=37.7539;EPPR=545.878;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.3125;PAIREDR=0.352;PAO=0;PQA=0;PQR=0;PRO=0;QA=628;QR=9957;RO=250;RPL=0;RPP=37.7539;RPPR=545.878;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=250;SRP=545.878;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:25,2:25:983:2:73:0,-1.19862,-81.843 0/1:51:43,8:43:1719:8:316:-13.4508,0,-139.576 0/0:40:38,2:38:1503:2:77:0,-4.73206,-128.207 0/0:67:65,2:65:2603:2:82:0,-12.3893,-226.618 0/0:34:32,2:32:1266:2:80:0,-2.64344,-106.617 0/0:47:47,0:47:1883:0:0:0,-14.1484,-169.672 dDocent_Contig_12880 19 . T C 1446.52 . AB=0.200658;ABP=239.615;AC=6;AF=0.5;AN=12;AO=61;CIGAR=1X1M;DP=304;DPB=304;DPRA=0;EPP=135.47;EPPR=493.763;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.786885;PAIREDR=0.889381;PAO=0;PQA=0;PQR=0;PRO=0;QA=2409;QR=9000;RO=226;RPL=0;RPP=135.47;RPPR=493.763;RPR=61;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=226;SRP=493.763;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:35:29,0,6:29:1157:0,6:0,220:-9.60817,-18.338,-113.645,0,-95.6785,-93.8723 0|1:66:57,0,9:57:2264:0,9:0,359:-12.8034,-29.9621,-216.335,0,-186.771,-184.062 0|1:49:36,0,13:36:1441:0,13:0,520:-32.3963,-43.2334,-161.939,0,-119.105,-115.191 0|1:46:31,0,15:31:1242:0,15:0,607:-41.1203,-50.4522,-152.769,0,-102.72,-98.2045 0|1:48:27,14,7:27:1069:14,7:566,274:-38.5446,0,-83.7683,-24.1525,-65.4595,-110.019 0|1:60:46,3,11:46:1827:3,11:121,429:-21.4011,-25.2716,-174.777,0,-140.423,-147.086 dDocent_Contig_12881 209 . N G 77.8076 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12882 81 . T A 974.684 . AB=0.333333;ABP=36.3062;AC=4;AF=0.333333;AN=12;AO=47;CIGAR=1X;DP=178;DPB=178;DPRA=1.89412;EPP=105.07;EPPR=287.473;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.87234;PAIREDR=0.801527;PAO=0;PQA=0;PQR=0;PRO=0;QA=1644;QR=4672;RO=131;RPL=47;RPP=105.07;RPPR=287.473;RPR=0;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=131;SRP=287.473;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:598:0:0:0,-5.11751,-54.1493 0/1:40:31,9:31:1098:9:312:-16.3742,0,-87.0889 0/1:40:32,8:32:1172:8:271:-12.6772,0,-93.7466 0/0:23:22,1:22:784:1:34:0,-3.52478,-67.4849 0/1:18:10,8:10:343:8:284:-20.4851,0,-25.7809 0/1:40:19,21:19:677:21:743:-55.1537,0,-49.2175 dDocent_Contig_12883 71 . C T 89.376 . AB=0.136364;ABP=129.351;AC=3;AF=0.25;AN=12;AO=17;CIGAR=1X;DP=220;DPB=220;DPRA=1.19231;EPP=39.9253;EPPR=443.819;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.235294;PAIREDR=0.37931;PAO=0;PQA=0;PQR=0;PRO=0;QA=582;QR=6848;RO=203;RPL=17;RPP=39.9253;RPPR=443.819;RPR=0;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=203;SRP=443.819;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:811:0:0:0,-7.22472,-73.3 0/0:45:43,2:43:1477:2:68:0,-7.08847,-126.764 0/1:38:33,5:33:1120:5:176:-4.74581,0,-89.6572 0/0:41:41,0:41:1372:0:0:0,-12.3422,-123.769 0/1:29:25,4:25:835:4:139:-4.1227,0,-66.728 0/1:43:37,6:37:1233:6:199:-5.29023,0,-98.3179 dDocent_Contig_12885 12 . C T 292.872 . AB=0.197531;ABP=67.377;AC=3;AF=0.3;AN=10;AO=17;CIGAR=1X3M;DP=124;DPB=124;DPRA=3.19444;EPP=39.9253;EPPR=226.672;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=5;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=672;QR=4061;RO=103;RPL=0;RPP=39.9253;RPPR=226.672;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=103;SRP=226.672;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:45:35,3,7:35:1377:3,7:120,270:-11.622,-12.2685,-124.639,0,-103.375,-111.154 0|0:34:33,0,1:33:1307:0,1:0,40:0,-9.93399,-117.502,-6.23934,-114.207,-113.906 0|1:20:18,0,2:18:707:0,2:0,80:-1.57119,-6.98973,-65.1279,0,-58.537,-57.935 0|1:16:9,0,7:9:352:0,7:0,282:-20.935,-23.6443,-52.5763,0,-29.3293,-27.2221 0|0:9:8,0,0:8:318:0,0:0,0:0,-2.40824,-28.6868,-2.40824,-28.6868,-28.6868 .:.:.:.:.:.:.:. dDocent_Contig_12886 11 . C T 243.035 . AB=0.666667;ABP=5.9056;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=112;DPB=112;DPRA=0.6;EPP=20.3821;EPPR=228.843;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.711538;PAO=0;PQA=0;PQR=0;PRO=0;QA=323;QR=4150;RO=104;RPL=0;RPP=20.3821;RPPR=228.843;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=104;SRP=228.843;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:6:6,0:6:226:0:0:0,-1.80618,-20.6983 0/0:35:35,0:35:1396:0:0:0,-10.536,-125.891 0/0:11:11,0:11:445:0:0:0,-3.31133,-40.4046 0/0:30:30,0:30:1196:0:0:0,-9.0309,-107.913 0/0:18:18,0:18:724:0:0:0,-5.41854,-65.4839 0/1:12:4,8:4:163:8:323:-25.8264,0,-11.4461 dDocent_Contig_12888 14 . T A 443.111 . AB=0.225806;ABP=63.7415;AC=3;AF=0.25;AN=12;AO=21;CIGAR=1X;DP=155;DPB=155;DPRA=1.5;EPP=48.6112;EPPR=293.988;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.626866;PAO=0;PQA=0;PQR=0;PRO=0;QA=849;QR=5420;RO=134;RPL=0;RPP=48.6112;RPPR=293.988;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=134;SRP=293.988;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:32,5:32:1298:5:201:-7.33299,0,-105.942 0/1:34:28,6:28:1136:6:243:-12.0126,0,-92.2822 0/1:22:12,10:12:474:10:405:-30.1874,0,-36.3854 0/0:13:13,0:13:528:0:0:0,-3.91339,-47.8671 0/0:24:24,0:24:970:0:0:0,-7.22472,-87.5988 0/0:25:25,0:25:1014:0:0:0,-7.52575,-91.5531 dDocent_Contig_12889 11 . A T 46.6223 . AB=0.1875;ABP=16.582;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=106;DPB=106;DPRA=0.888889;EPP=9.52472;EPPR=226.672;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.776699;PAO=0;PQA=0;PQR=0;PRO=0;QA=118;QR=4136;RO=103;RPL=0;RPP=9.52472;RPPR=226.672;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=103;SRP=226.672;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:561:0:0:0,-4.21442,-50.8283 0/0:16:16,0:16:645:0:0:0,-4.81648,-58.3837 0/1:16:13,3:13:522:3:118:-6.1851,0,-42.508 0/0:21:21,0:21:853:0:0:0,-6.32163,-77.081 0/0:22:22,0:22:877:0:0:0,-6.62266,-79.2385 0/0:17:17,0:17:678:0:0:0,-5.11751,-61.3504 dDocent_Contig_12890 98 . N A 123.915 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=7.37776;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=134;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:134:-12.3912,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12892 14 . T A 812.586 . AB=0.0515464;ABP=172.452;AC=0;AF=0;AN=12;AO=5;CIGAR=1X2M1X5M;DP=255;DPB=252.556;DPRA=1.02105;EPP=13.8677;EPPR=409.076;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=0.8;PAIREDR=0.283422;PAO=0;PQA=0;PQR=0;PRO=0;QA=200;QR=7340;RO=187;RPL=0;RPP=13.8677;RPPR=409.076;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=187;SRP=409.076;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:36:21,0,0,0,9,5:21:828:0,0,0,9,5:0,0,0,356,204:-22.9552,-29.2768,-97.3984,-29.2768,-97.3984,-97.3984,-29.2768,-97.3984,-97.3984,-97.3984,0,-68.1153,-68.1153,-68.1153,-65.406,-12.4414,-80.5652,-80.5652,-80.5652,-51.2814,-79.06 0|0:46:31,4,0,4,7,0:31:1225:4,0,4,7,0:159,0,157,276,0:-13.3505,-9.58971,-109.197,-22.6825,-110.401,-123.492,-10.049,-97.7656,-110.857,-109.653,0,-87.7197,-100.811,-88.1758,-98.7038,-22.6825,-110.401,-123.492,-110.857,-100.811,-123.492 0|0:27:22,0,0,0,5,0:22:859:0,0,0,5,0:0,0,0,192,0:-9.45741,-16.0801,-86.7006,-16.0801,-86.7006,-86.7006,-16.0801,-86.7006,-86.7006,-86.7006,0,-71.0043,-71.0043,-71.0043,-69.4992,-16.0801,-86.7006,-86.7006,-86.7006,-71.0043,-86.7006 0|0:51:28,1,0,16,5,1:28:1100:1,0,16,5,1:41,0,623,193,31:-42.7173,-47.7609,-137.939,-51.1461,-138.24,-141.624,0,-87.1012,-90.4859,-85.6694,-35.3362,-122.43,-125.815,-74.6766,-124.309,-48.6611,-135.753,-139.137,-87.9997,-123.328,-138.836 0|0:52:48,0,0,0,4,0:48:1878:0,0,0,4,0:0,0,0,155,0:0,-14.4494,-168.86,-14.4494,-168.86,-168.86,-14.4494,-168.86,-168.86,-168.86,-1.35077,-156.148,-156.148,-156.148,-154.944,-14.4494,-168.86,-168.86,-168.86,-156.148,-168.86 0|0:43:37,0,3,0,3,0:37:1450:0,3,0,3,0:0,113,0,116,0:0,-11.1381,-130.385,-1.88294,-121.126,-120.223,-11.1381,-130.385,-121.126,-130.385,-1.64094,-120.892,-111.634,-120.892,-119.989,-11.1381,-130.385,-121.126,-130.385,-120.892,-130.385 dDocent_Contig_12893 11 . A G 278.116 . AB=0.124378;ABP=249.337;AC=1;AF=0.0833333;AN=12;AO=27;CIGAR=1X;DP=992;DPB=992;DPRA=1.38567;EPP=61.6401;EPPR=1911.75;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9772;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.823834;PAO=0;PQA=0;PQR=0;PRO=0;QA=1074;QR=38500;RO=965;RPL=0;RPP=61.6401;RPPR=2098.48;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=943;SRP=1911.75;SRR=22;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:117:117,0:117:4684:0:0:0,-35.2205,-421.47 0/0:172:172,0:172:6870:0:0:0,-51.7772,-617.867 0/0:171:171,0:171:6829:0:0:0,-51.4761,-614.297 0/0:126:126,0:126:4979:0:0:0,-37.9298,-447.999 0/0:205:203,2:203:8169:2:79:0,-54.2139,-727.238 0/1:201:176,25:176:6969:25:995:-29.3345,0,-566.401 dDocent_Contig_12894 1 . N G 115.055 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=7;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=18;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=218;QR=0;RO=0;RPL=0;RPP=18.2106;RPPR=0;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:70:-3.40395,-0.60206,0 1/1:3:0,3:0:0:3:80:-4.22352,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:68:-3.39985,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_12895 180 . C T 59.3059 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=3;CIGAR=1X;DP=172;DPB=172;DPRA=0.510949;EPP=9.52472;EPPR=369.989;GTI=0;LEN=1;MEANALT=1;MQM=24;MQMR=48.4852;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.621302;PAO=0;PQA=0;PQR=0;PRO=0;QA=121;QR=6700;RO=169;RPL=3;RPP=9.52472;RPPR=369.989;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=369.989;SRR=169;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:804:0:0:0,-6.0206,-66.0423 0/0:59:59,0:59:2353:0:0:0,-17.7608,-204.173 0/0:33:32,1:32:1232:1:40:0,-8.53504,-90.6097 0/0:43:43,0:43:1711:0:0:0,-12.9443,-145.537 1/1:2:0,2:0:0:2:81:-5.45329,-0.60206,0 0/0:15:15,0:15:600:0:0:0,-4.51545,-38.4343 dDocent_Contig_12896 27 . G C 6498.3 . AB=0.0825397;ABP=479.831;AC=1;AF=0.0833333;AN=12;AO=26;CIGAR=2M1D2X3M1X;DP=422;DPB=461.556;DPRA=0;EPP=59.4686;EPPR=113.755;GTI=0;LEN=1;MEANALT=6.75;MQM=60;MQMR=60;NS=6;NUMALT=7;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1018;QR=1960;RO=51;RPL=0;RPP=59.4686;RPPR=113.755;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=51;SRP=113.755;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:57:10,10,0,0,22,0,2,12:10:392:10,0,0,22,0,2,12:372,0,0,785,0,81,471:-67.4421,-40.011,-69.241,-70.4524,-72.2513,-102.692,-70.4524,-72.2513,-102.692,-102.692,-6.49876,-8.30146,-38.737,-38.737,-32.1144,-70.4524,-72.2513,-102.692,-102.692,-38.737,-102.692,-63.7717,-65.5709,-96.0116,-96.0116,-32.0567,-96.0116,-95.4096,-31.7114,-33.5118,-63.9535,-63.9535,0,-63.9535,-57.2728,-60.3412 0|0:99:17,5,1,0,44,0,2,30:17:645:5,1,0,44,0,2,30:182,40,0,1626,0,58,1163:-170.525,-160.781,-212.162,-172.347,-210.372,-224.933,-175.643,-213.667,-225.234,-228.529,-42.6629,-80.6872,-92.253,-95.5485,-82.3031,-175.643,-213.667,-225.234,-228.529,-95.5485,-228.529,-171.031,-209.055,-220.622,-223.917,-90.9378,-223.917,-223.315,-80.0961,-118.123,-129.689,-132.985,0,-132.985,-128.373,-123.954 0|0:57:10,6,4,0,13,2,2,17:10:391:6,4,0,13,2,2,17:238,147,0,507,75,82,644:-59.3081,-42.724,-73.0685,-50.3037,-62.8599,-81.2494,-62.3184,-74.8747,-82.4535,-94.4683,-20.64,-33.1969,-40.7769,-52.7916,-48.8782,-56.2379,-68.7942,-76.3731,-88.3878,-46.7111,-87.7857,-55.5489,-68.1053,-75.6842,-87.6991,-46.0219,-81.6185,-87.097,-9.52721,-22.0837,-29.6639,-41.6781,0,-35.5978,-34.9084,-36.5606 1|0:85:14,10,14,5,15,1,8,17:14:532:10,14,5,15,1,8,17:379,551,192,509,25,321,666:-52.2563,-25.4037,-66.021,-11.1407,-23.7017,-50.5546,-40.7105,-53.2712,-39.0087,-82.8329,-15.2213,-27.7814,-13.519,-43.0874,-54.3314,-54.5255,-67.086,-52.8238,-82.3926,-56.9018,-97.8515,-30.0186,-42.5794,-28.3166,-57.8864,-32.3958,-71.7012,-71.2384,-1.70247,-14.2635,0,-29.5706,-4.08135,-43.3859,-18.8784,-40.2135 0|0:50:0,13,0,0,29,0,6,0:0:0:13,0,0,29,0,6,0:496,0,0,1068,0,226,0:-128.01,-87.3218,-83.4084,-128.01,-87.3218,-128.01,-128.01,-87.3218,-128.01,-128.01,-40.6948,0,-40.6948,-40.6948,-31.9649,-128.01,-87.3218,-128.01,-128.01,-40.6948,-128.01,-109.493,-68.804,-109.493,-109.493,-22.1781,-109.493,-107.687,-128.01,-87.3218,-128.01,-128.01,-40.6948,-128.01,-109.493,-128.01 0|0:74:0,22,7,0,36,5,0,3:0:0:22,7,0,36,5,0,3:860,280,0,1375,174,0,122:-183.509,-112.804,-106.182,-160.442,-89.7369,-158.335,-183.509,-112.804,-160.442,-183.509,-70.7061,0,-47.6386,-70.7061,-59.869,-169.487,-98.7838,-146.421,-169.487,-56.6879,-167.982,-183.509,-112.804,-160.442,-183.509,-70.7061,-169.487,-183.509,-173.445,-102.74,-150.378,-173.445,-60.6413,-159.423,-173.445,-172.542 dDocent_Contig_12897 34 . T C 2563.39 . AB=0.476923;ABP=3.9123;AC=4;AF=0.333333;AN=12;AO=95;CIGAR=1X;DP=275;DPB=275;DPRA=0.922449;EPP=209.3;EPPR=393.875;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3643;QR=7215;RO=180;RPL=0;RPP=209.3;RPPR=393.875;RPR=95;RUN=1;SAF=95;SAP=209.3;SAR=0;SRF=180;SRP=393.875;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:51:36,15:36:1441:15:582:-37.3627,0,-114.581 0/1:39:28,11:28:1122:11:441:-28.3046,0,-89.523 0/1:53:23,30:23:914:30:1123:-85.3945,0,-66.6078 0/1:52:15,37:15:601:37:1421:-112.499,0,-38.7726 0/0:49:49,0:49:1972:0:0:0,-14.7505,-177.672 0/0:31:29,2:29:1165:2:76:0,-2.11712,-97.9117 dDocent_Contig_12898 42 . T C 11368.6 . AB=0.564232;ABP=17.237;AC=5;AF=0.416667;AN=12;AO=351;CIGAR=1X;DP=643;DPB=643;DPRA=2.20168;EPP=765.197;EPPR=637.08;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=14016;QR=11615;RO=292;RPL=0;RPP=765.197;RPPR=637.08;RPR=351;RUN=1;SAF=351;SAP=765.197;SAR=0;SRF=292;SRP=637.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:38,0:38:1537:0:0:0,-11.4391,-138.567 0/1:96:59,37:59:2335:37:1475:-104.094,0,-181.396 0/0:81:81,0:81:3244:0:0:0,-24.3834,-292.019 0/1:117:98,19:98:3862:19:758:-33.3185,0,-312.363 0/1:184:16,168:16:637:168:6731:-550.089,0,-2.27452 1/1:127:0,127:0:0:127:5052:-454.544,-38.2308,0 dDocent_Contig_12899 108 . C T 922.668 . AB=0.305785;ABP=42.6531;AC=4;AF=0.333333;AN=12;AO=37;CIGAR=1X;DP=190;DPB=190;DPRA=0.876812;EPP=83.3548;EPPR=335.246;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.297297;PAIREDR=0.712418;PAO=0;PQA=0;PQR=0;PRO=0;QA=1494;QR=6110;RO=153;RPL=0;RPP=83.3548;RPPR=335.246;RPR=37;RUN=1;SAF=0;SAP=83.3548;SAR=37;SRF=0;SRP=335.246;SRR=153;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:18,12:18:712:12:479:-34.4285,0,-55.3733 0/0:42:42,0:42:1663:0:0:0,-12.6433,-149.895 0/1:17:11,6:11:436:6:244:-17.2213,0,-34.4731 0/0:27:27,0:27:1080:0:0:0,-8.12781,-97.4855 0/1:34:25,9:25:1003:9:365:-22.9795,0,-80.3292 0/1:40:30,10:30:1216:10:406:-24.8594,0,-97.67 dDocent_Contig_12901 15 . T C 1175.23 . AB=0.317881;ABP=46.5117;AC=6;AF=0.5;AN=12;AO=48;CIGAR=1X;DP=151;DPB=151;DPRA=0;EPP=107.241;EPPR=226.672;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.583333;PAIREDR=0.514563;PAO=0;PQA=0;PQR=0;PRO=0;QA=1911;QR=4075;RO=103;RPL=0;RPP=107.241;RPPR=226.672;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=103;SRP=226.672;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:13,8:13:480:8:321:-22.9363,0,-37.2098 0/1:20:11,9:11:447:9:356:-26.3802,0,-34.5649 0/1:32:27,5:27:1081:5:203:-9.01989,0,-87.9427 0/1:28:10,18:10:408:18:705:-55.3429,0,-28.6517 0/1:27:22,5:22:873:5:204:-10.6162,0,-70.7476 0/1:23:20,3:20:786:3:122:-4.4488,0,-64.1307 dDocent_Contig_12902 27 . G A 1038.71 . AB=0.255556;ABP=96.4319;AC=6;AF=0.5;AN=12;AO=46;CIGAR=1X;DP=180;DPB=180;DPRA=0;EPP=102.898;EPPR=293.988;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.934783;PAIREDR=0.858209;PAO=0;PQA=0;PQR=0;PRO=0;QA=1856;QR=5387;RO=134;RPL=0;RPP=102.898;RPPR=293.988;RPR=46;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=134;SRP=293.988;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:17:7,10:7:283:10:403:-31.5118,0,-20.725 0/1:48:42,6:42:1678:6:246:-8.07068,0,-136.796 0/1:29:23,6:23:934:6:243:-13.5181,0,-75.6317 0/1:17:15,2:15:612:2:82:-2.66217,0,-50.2996 0/1:27:23,4:23:918:4:158:-6.47209,0,-74.7986 0/1:42:24,18:24:962:18:724:-52.842,0,-74.2364 dDocent_Contig_12903 125 . G C 352.994 . AB=0.237624;ABP=63.403;AC=2;AF=0.166667;AN=12;AO=24;CIGAR=1X;DP=490;DPB=490;DPRA=0.51928;EPP=55.1256;EPPR=1010.57;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=759;QR=15420;RO=464;RPL=0;RPP=55.1256;RPPR=1010.57;RPR=24;RUN=1;SAF=0;SAP=55.1256;SAR=24;SRF=0;SRP=1010.57;SRR=464;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:31,6:31:1025:6:189:-6.18289,0,-81.4119 0/0:64:64,0:64:2110:0:0:0,-19.2659,-190.173 0/0:15:15,0:15:503:0:0:0,-4.51545,-45.5917 0/1:64:46,18:46:1524:18:570:-32.3383,0,-118.183 0/0:194:192,0:192:6405:0:0:0,-57.7978,-576.322 0/0:116:116,0:116:3853:0:0:0,-34.9195,-346.993 dDocent_Contig_12904 156 . N G 199.397 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0.6;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=203;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:40:-3.99568,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12905 15 . A T 4174.72 . AB=0.204782;ABP=731.253;AC=4;AF=0.333333;AN=12;AO=226;CIGAR=1M1X2M1X1M1X;DP=1672;DPB=1678.86;DPRA=0.769275;EPP=493.763;EPPR=3017.01;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.11022e-16;PAIRED=0.995575;PAIREDR=0.997839;PAO=0;PQA=0;PQR=0;PRO=0;QA=8911;QR=54834;RO=1388;RPL=0;RPP=493.763;RPPR=3017.01;RPR=226;RUN=1;SAF=226;SAP=493.763;SAR=0;SRF=1388;SRP=3017.01;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:222:138,45,38:138:5459:45,38:1771,1476:-104.142,0,-435.711,-24.4133,-327.987,-462.226 0|1:300:227,65,8:227:8975:65,8:2549,309:-141.285,0,-719.007,-184.247,-713.202,-920.406 0|1:137:118,17,1:118:4646:17,1:666,40:-19.2404,0,-377.07,-51.4664,-378.893,-433.352 0|1:303:231,70,0:231:9158:70,0:2788,0:-160.027,0,-732.717,-229.565,-753.789,-983.365 0|0:345:341,0,0:341:13447:0,0:0,0:0,-102.651,-1209.11,-102.651,-1209.11,-1209.11 0|0:365:333,29,0:333:13149:29,0:1137,0:0,-6.61181,-1079.96,-100.243,-1088.69,-1182.18 dDocent_Contig_12906 7 . A T 2226.08 . AB=0.14455;ABP=466.121;AC=1;AF=0.0833333;AN=12;AO=61;CIGAR=1X2M2X3M1X7M4D1X10M1X;DP=593;DPB=554.156;DPRA=0;EPP=135.47;EPPR=459.02;GTI=0;LEN=1;MEANALT=13;MQM=20.9672;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=0;PAIREDR=0.985714;PAO=0;PQA=0;PQR=0;PRO=0;QA=1279;QR=8097;RO=210;RPL=0;RPP=135.47;RPPR=459.02;RPR=61;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=210;SRP=459.02;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:89:48,0,4,1,14,14,1,0,0,0:48:1821:0,4,1,14,14,1,0,0,0:0,84,38,505,326,24,0,0,0:-23.5218,-37.9712,-187.343,-32.7019,-182.072,-180.868,-34.8616,-184.236,-178.964,-183.935,0,-149.407,-144.137,-146.299,-145.193,-16.6537,-166.017,-160.748,-162.91,-128.086,-161.803,-36.3838,-185.756,-180.484,-182.648,-147.82,-164.43,-185.455,-37.9712,-187.343,-182.072,-184.236,-149.407,-166.017,-185.756,-187.343,-37.9712,-187.343,-182.072,-184.236,-149.407,-166.017,-185.756,-187.343,-187.343,-37.9712,-187.343,-182.072,-184.236,-149.407,-166.017,-185.756,-187.343,-187.343,-187.343 0|0:86:35,0,14,3,10,11,0,1,0,0:35:1353:0,14,3,10,11,0,1,0,0:0,294,111,345,259,0,21,0,0:-15.1751,-25.7111,-136.9,-7.25825,-118.449,-114.234,-16.7934,-127.988,-109.537,-127.085,0,-111.206,-92.7579,-102.294,-108.196,-8.68919,-119.883,-101.439,-110.971,-94.1909,-116.572,-25.7111,-136.9,-118.449,-127.988,-111.206,-119.883,-136.9,-24.3927,-135.582,-117.131,-126.67,-109.888,-118.565,-135.582,-135.281,-25.7111,-136.9,-118.449,-127.988,-111.206,-119.883,-136.9,-135.582,-136.9,-25.7111,-136.9,-118.449,-127.988,-111.206,-119.883,-136.9,-135.582,-136.9,-136.9 0|0:86:47,0,10,0,11,7,0,2,0,0:47:1837:0,10,0,11,7,0,2,0,0:0,210,0,380,157,0,42,0,0:-13.9382,-28.0866,-179.206,-14.905,-166.027,-163.017,-28.0866,-179.206,-166.027,-179.206,0,-151.156,-137.981,-151.156,-147.845,-17.9568,-169.081,-155.906,-169.081,-141.033,-166.973,-28.0866,-179.206,-166.027,-179.206,-151.156,-169.081,-179.206,-25.4497,-176.57,-163.392,-176.57,-148.521,-166.445,-176.57,-175.968,-28.0866,-179.206,-166.027,-179.206,-151.156,-169.081,-179.206,-176.57,-179.206,-28.0866,-179.206,-166.027,-179.206,-151.156,-169.081,-179.206,-176.57,-179.206,-179.206 0|1:161:79,2,33,0,11,13,0,1,0,7:79:3052:2,33,0,11,13,0,1,0,7:66,691,0,352,323,0,21,0,241:-19.5606,-38.5436,-288.687,0,-245.953,-240.815,-43.342,-289.289,-250.749,-294.086,-17.8605,-263.82,-225.283,-268.616,-265.305,-21.6989,-267.654,-229.119,-272.45,-246.981,-268.536,-43.342,-289.289,-250.749,-294.086,-268.616,-272.45,-294.086,-42.0228,-287.971,-249.431,-292.767,-267.297,-271.131,-292.767,-292.466,-43.342,-289.289,-250.749,-294.086,-268.616,-272.45,-294.086,-292.767,-294.086,-25.1986,-271.155,-232.616,-275.951,-250.481,-254.315,-275.951,-274.632,-275.951,-273.844 0|0:54:0,3,0,5,6,11,10,1,0,17:0:0:3,0,5,6,11,10,1,0,17:99,0,201,204,264,240,22,0,488:-51.8202,-44.6234,-43.7203,-51.8202,-44.6234,-51.8202,-35.3213,-28.1233,-35.3213,-33.8162,-36.8426,-29.645,-36.8426,-20.341,-35.0364,-34.3557,-27.1592,-34.3557,-17.8544,-19.3782,-31.0444,-35.9431,-28.7465,-35.9431,-19.442,-20.9655,-18.4862,-32.9328,-50.4122,-43.2154,-50.4122,-33.9132,-35.4346,-32.9484,-34.5357,-50.1112,-51.8202,-44.6234,-51.8202,-35.3213,-36.8426,-34.3557,-35.9431,-50.4122,-51.8202,-17.4561,-10.2581,-17.4561,-0.949681,-2.47499,0,-1.58621,-16.0487,-17.4561,-12.3386 0|0:117:1,1,0,3,19,25,1,9,12,32:1:34:1,0,3,19,25,1,9,12,32:33,0,121,654,606,24,197,469,918:-109.803,-107.706,-110.164,-110.104,-110.465,-112.863,-100.176,-100.536,-102.935,-102.032,-61.8001,-62.1604,-64.559,-54.6297,-58.8394,-69.8589,-70.2191,-72.6175,-62.6887,-24.3141,-65.0917,-108.516,-108.876,-111.275,-101.346,-62.9706,-71.0294,-110.974,-97.5171,-97.8773,-100.276,-90.3473,-51.9721,-60.0338,-98.6875,-97.5664,-72.8739,-73.2342,-75.6327,-65.7037,-27.3246,-35.3855,-74.0443,-63.0451,-72.0204,-45.5487,-45.9091,-48.3076,-38.378,0,-8.07152,-46.7195,-35.7235,-11.0723,-38.6746 dDocent_Contig_12907 46 . A T 81.5936 . AB=0.6;ABP=3.44459;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=243;DPB=243;DPRA=0.105042;EPP=9.52472;EPPR=498.432;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=8.67362e-19;PAIRED=0;PAIREDR=0.291667;PAO=0;PQA=0;PQR=0;PRO=0;QA=120;QR=9548;RO=240;RPL=0;RPP=9.52472;RPPR=498.432;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=240;SRP=524.164;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1627:0:0:0,-12.3422,-146.663 0/0:50:50,0:50:2004:0:0:0,-15.0515,-180.552 0/0:74:74,0:74:2962:0:0:0,-22.2762,-266.67 0/0:56:56,0:56:2204:0:0:0,-16.8577,-198.541 0/1:5:2,3:2:68:3:120:-9.68216,0,-4.95273 0/0:17:17,0:17:683:0:0:0,-5.11751,-61.7983 dDocent_Contig_12908 9 . A T 2424.36 . AB=0.3875;ABP=29.3937;AC=6;AF=0.5;AN=12;AO=93;CIGAR=1X3M;DP=240;DPB=240;DPRA=0;EPP=204.957;EPPR=302.673;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.978495;PAIREDR=0.978261;PAO=0;PQA=0;PQR=0;PRO=0;QA=3577;QR=5246;RO=138;RPL=0;RPP=204.957;RPPR=302.673;RPR=93;RUN=1;SAF=93;SAP=204.957;SAR=0;SRF=138;SRP=302.673;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:24:12,0,12:12:457:0,12:0,464:-34.8868,-38.4992,-75.9825,0,-37.8667,-34.2544 0|1:55:26,6,23:26:999:6,23:233,886:-64.9208,-53.6019,-133.806,0,-62.8614,-75.0835 0|1:25:16,0,9:16:603:0,9:0,347:-24.0642,-28.8807,-78.2886,0,-49.79,-47.0807 0|1:48:21,3,24:21:769:3,24:119,907:-68.0048,-64.5283,-126.462,0,-53.0163,-55.5914 0|1:42:37,0,5:37:1425:0,5:0,195:-5.28094,-16.419,-133.42,0,-117.39,-115.885 0|1:46:26,0,20:26:993:0,20:0,778:-56.5007,-64.3275,-145.792,0,-81.8499,-75.8293 dDocent_Contig_12909 44 . T G 72.4013 . AB=0.190476;ABP=20.4855;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=104;DPB=104;DPRA=2.42553;EPP=16.0391;EPPR=215.815;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.836735;PAO=0;PQA=0;PQR=0;PRO=0;QA=241;QR=3906;RO=98;RPL=0;RPP=16.0391;RPPR=215.815;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=98;SRP=215.815;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:17,4:17:663:4:160:-8.4618,0,-53.6719 0/0:18:18,0:18:716:0:0:0,-5.41854,-64.7662 0/0:7:7,0:7:281:0:0:0,-2.10721,-25.6611 0/0:36:34,2:34:1353:2:81:0,-3.15135,-114.339 0/0:2:2,0:2:80:0:0:0,-0.60206,-7.59157 0/0:20:20,0:20:813:0:0:0,-6.0206,-73.4846 dDocent_Contig_12910 41 . T C 2365.67 . AB=0.263298;ABP=185.992;AC=5;AF=0.416667;AN=12;AO=99;CIGAR=1X;DP=378;DPB=378;DPRA=37.6;EPP=217.986;EPPR=608.851;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3971;QR=11161;RO=279;RPL=0;RPP=217.986;RPPR=608.851;RPR=99;RUN=1;SAF=99;SAP=217.986;SAR=0;SRF=279;SRP=608.851;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:2:2,0:2:81:0:0:0,-0.60206,-7.68573 0/1:21:10,11:10:403:11:447:-34.2642,0,-30.3073 0/1:17:4,13:4:163:13:524:-42.3896,0,-9.94092 0/1:38:18,20:18:731:20:816:-62.3143,0,-54.6755 0/1:146:107,39:107:4271:39:1539:-94.7942,0,-340.385 0/1:154:138,16:138:5512:16:645:-12.026,0,-449.546 dDocent_Contig_12911 23 . T A 113.846 . AB=0.208333;ABP=20.744;AC=1;AF=0.125;AN=8;AO=5;CIGAR=1M1X1M;DP=45;DPB=43.6667;DPRA=1.14286;EPP=13.8677;EPPR=81.1833;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=4;NUMALT=2;ODDS=0;PAIRED=0.8;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=197;QR=1383;RO=36;RPL=0;RPP=13.8677;RPPR=81.1833;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=36;SRP=81.1833;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:14:13,1,0:13:470:1,0:41,0:0,-0.119853,-38.5301,-3.91339,-38.8311,-42.2186 0|0:13:10,2,1:10:401:2,1:81,40:-3.67216,0,-32.4381,-3.38902,-29.7451,-36.1239 0|0:7:7,0,0:7:272:0,0:0,0:0,-2.10721,-24.8448,-2.10721,-24.8448,-24.8448 0|1:11:6,1,4:6:240:1,4:39,157:-11.1072,-9.70802,-29.1815,0,-16.5741,-18.5744 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_12912 114 . T G 173.621 . AB=0.36;ABP=7.26639;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=104;DPB=104;DPRA=1.58228;EPP=22.5536;EPPR=207.129;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.978723;PAO=0;PQA=0;PQR=0;PRO=0;QA=290;QR=3232;RO=94;RPL=0;RPP=22.5536;RPPR=207.129;RPR=9;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=207.129;SRR=94;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:249:0:0:0,-2.10721,-22.7556 0/0:21:21,0:21:695:0:0:0,-6.32163,-62.8568 0/0:15:15,0:15:518:0:0:0,-4.51545,-46.9473 0/0:24:23,0:23:805:0:0:0,-6.92369,-72.4393 0/0:12:12,0:12:407:0:0:0,-3.61236,-36.9559 0/1:25:16,9:16:558:9:290:-18.885,0,-43.022 dDocent_Contig_12913 39 . A G 3878.33 . AB=0.321121;ABP=131.97;AC=2;AF=0.166667;AN=12;AO=154;CIGAR=1X;DP=835;DPB=835;DPRA=2.3004;EPP=337.417;EPPR=1479.61;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6100;QR=26968;RO=680;RPL=0;RPP=337.417;RPPR=1479.61;RPR=154;RUN=1;SAF=154;SAP=337.417;SAR=0;SRF=680;SRP=1479.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:58:58,0:58:2261:0:0:0,-17.4597,-203.657 0/0:118:113,5:113:4481:5:204:0,-16.7775,-384.498 0/0:55:55,0:55:2151:0:0:0,-16.5566,-193.766 0/0:140:140,0:140:5560:0:0:0,-42.1442,-500.229 0/1:184:165,19:165:6601:19:737:-11.257,0,-538.41 0/1:280:149,130:149:5914:130:5159:-379.798,0,-447.658 dDocent_Contig_12914 11 . C G 374.604 . AB=0.157233;ABP=165.27;AC=2;AF=0.2;AN=10;AO=25;CIGAR=1X;DP=309;DPB=309;DPRA=1.59;EPP=57.2971;EPPR=619.708;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996479;PAO=0;PQA=0;PQR=0;PRO=0;QA=977;QR=11186;RO=284;RPL=0;RPP=57.2971;RPPR=619.708;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=284;SRP=619.708;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:973:0:0:0,-7.22472,-87.8678 0/1:145:130,15:130:5061:15:587:-9.51994,0,-411.733 0/0:37:37,0:37:1484:0:0:0,-11.1381,-133.806 0/0:89:89,0:89:3510:0:0:0,-26.7917,-315.953 ./.:.:.:.:.:.:.:. 0/1:14:4,10:4:158:10:390:-31.2415,0,-10.3853 dDocent_Contig_12915 107 . N G 64.5896 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=68;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:68:-6.45788,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12917 19 . G A 1111.7 . AB=0.630137;ABP=13.7487;AC=2;AF=0.166667;AN=12;AO=51;CIGAR=1X1M2X;DP=626;DPB=626;DPRA=0.592875;EPP=113.755;EPPR=1210.35;GTI=0;LEN=1;MEANALT=1;MQM=34.2353;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.742806;PAO=0;PQA=0;PQR=0;PRO=0;QA=2021;QR=21751;RO=556;RPL=0;RPP=113.755;RPPR=1210.35;RPR=51;RUN=1;SAF=51;SAP=113.755;SAR=0;SRF=556;SRP=1210.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:141:131,0:131:5125:0:0:0,-39.4349,-460.788 0|0:90:87,0:87:3389:0:0:0,-26.1896,-304.7 0|0:160:155,5:155:6012:5:200:0,-32.1935,-524.952 0|0:162:156,0:156:6155:0:0:0,-46.9607,-553.385 0|1:18:3,15:3:116:15:595:-39.5869,0,-5.399 0|1:55:24,31:24:954:31:1226:-74.8055,0,-69.6087 dDocent_Contig_12918 8 . T C 1160.52 . AB=0.28125;ABP=16.3106;AC=6;AF=0.5;AN=12;AO=40;CIGAR=1X;DP=86;DPB=86;DPRA=2.66667;EPP=89.8692;EPPR=102.898;GTI=0;LEN=1;MEANALT=1;MQM=57;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1537;QR=1779;RO=46;RPL=0;RPP=89.8692;RPPR=102.898;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=46;SRP=102.898;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:16,1:16:619:1:39:0,-1.22095,-52.1536 0/0:6:6,0:6:232:0:0:0,-1.80618,-21.2489 0/1:21:18,3:18:694:3:117:-4.58875,0,-56.4722 0/1:11:5,6:5:195:6:232:-17.9376,0,-14.6129 1/1:10:0,10:0:0:10:386:-31.6458,-3.0103,0 1/1:21:1,20:1:39:20:763:-65.1017,-2.42507,0 dDocent_Contig_12919 13 . G A 2103.91 . AB=0.45679;ABP=5.63751;AC=6;AF=0.5;AN=12;AO=74;CIGAR=1X;DP=162;DPB=162;DPRA=0;EPP=163.699;EPPR=194.1;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.959459;PAIREDR=0.988636;PAO=0;PQA=0;PQR=0;PRO=0;QA=2981;QR=3570;RO=88;RPL=0;RPP=163.699;RPPR=194.1;RPR=74;RUN=1;SAF=74;SAP=163.699;SAR=0;SRF=88;SRP=194.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:13:10,3:10:407:3:120:-7.27392,0,-33.0772 0/1:22:17,5:17:687:5:202:-11.9392,0,-55.5373 0/1:36:19,17:19:776:17:690:-51.5916,0,-59.3209 0/1:33:21,12:21:855:12:477:-33.3419,0,-67.3254 0/1:25:12,13:12:486:13:524:-39.9806,0,-36.5653 0/1:33:9,24:9:359:24:968:-77.4852,0,-22.7382 dDocent_Contig_12920 52 . G A 577.331 . AB=0.290698;ABP=35.7339;AC=3;AF=0.25;AN=12;AO=25;CIGAR=1X;DP=237;DPB=237;DPRA=0.569536;EPP=57.2971;EPPR=463.362;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.957547;PAO=0;PQA=0;PQR=0;PRO=0;QA=975;QR=8258;RO=212;RPL=25;RPP=57.2971;RPPR=463.362;RPR=0;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=212;SRP=463.362;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:1:1,0:1:38:0:0:0,-0.30103,-3.79727 0/1:36:23,13:23:902:13:493:-33.8688,0,-70.6413 0/1:37:27,10:27:1024:10:401:-25.3121,0,-81.303 0/1:13:11,2:11:439:2:81:-3.77234,0,-35.9525 0/0:63:63,0:63:2474:0:0:0,-18.9649,-222.821 0/0:87:87,0:87:3381:0:0:0,-26.1896,-304.365 dDocent_Contig_12922 8 . T G 586.192 . AB=0.20122;ABP=130.174;AC=4;AF=0.333333;AN=12;AO=34;CIGAR=1X;DP=201;DPB=201;DPRA=3.15;EPP=76.8404;EPPR=363.475;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=59.9458;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.970588;PAIREDR=0.957831;PAO=0;PQA=0;PQR=0;PRO=0;QA=1304;QR=6345;RO=166;RPL=0;RPP=76.8404;RPPR=363.475;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=166;SRP=363.475;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:40:34,6:34:1290:6:233:-9.29888,0,-104.344 0/1:55:44,11:44:1691:11:421:-21.6863,0,-135.894 0/0:25:24,1:24:913:1:39:0,-3.62919,-78.587 0/1:48:37,10:37:1422:10:387:-20.6588,0,-113.731 0/1:21:15,6:15:566:6:224:-14.1971,0,-44.9505 0/0:12:12,0:12:463:0:0:0,-3.61236,-42.0213 dDocent_Contig_12923 98 . N C 75.9647 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=76;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 1/1:1:0,1:0:0:1:7:-0.699998,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12924 14 . A G 1466.57 . AB=0.218069;ABP=224.629;AC=3;AF=0.25;AN=12;AO=70;CIGAR=1X;DP=575;DPB=575;DPRA=1.26378;EPP=155.013;EPPR=1095.26;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.574553;PAO=0;PQA=0;PQR=0;PRO=0;QA=2751;QR=19951;RO=503;RPL=0;RPP=155.013;RPPR=1095.26;RPR=70;RUN=1;SAF=70;SAP=155.013;SAR=0;SRF=503;SRP=1095.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:61:61,0:61:2413:0:0:0,-18.3628,-217.323 0/1:130:81,49:81:3257:49:1904:-132.429,0,-254.056 0/1:100:90,10:90:3567:10:405:-6.70762,0,-290.962 0/1:91:80,11:80:3152:11:442:-12.7417,0,-256.374 0/0:49:47,0:47:1876:0:0:0,-14.1484,-168.789 0/0:144:144,0:144:5686:0:0:0,-43.3483,-511.594 dDocent_Contig_12926 8 . T G 362.715 . AB=0.22619;ABP=57.7107;AC=3;AF=0.25;AN=12;AO=21;CIGAR=1X;DP=153;DPB=153;DPRA=0.75625;EPP=48.6112;EPPR=289.645;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.901515;PAO=0;PQA=0;PQR=0;PRO=0;QA=807;QR=5093;RO=132;RPL=0;RPP=48.6112;RPPR=289.645;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=132;SRP=289.645;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:21,1:21:815:1:39:0,-2.7261,-69.7787 0/0:15:14,1:14:543:1:39:0,-0.618885,-45.3194 0/1:13:8,5:8:305:5:193:-13.828,0,-23.8965 0/1:42:31,11:31:1186:11:421:-25.599,0,-94.3944 0/1:29:26,3:26:1012:3:115:-1.99502,0,-82.6598 0/0:32:32,0:32:1232:0:0:0,-9.63296,-111.173 dDocent_Contig_12927 44 . C A 256.649 . AB=0.216667;ABP=44.8473;AC=3;AF=0.25;AN=12;AO=13;CIGAR=1X;DP=117;DPB=117;DPRA=1.05263;EPP=31.2394;EPPR=228.843;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=531;QR=4121;RO=104;RPL=0;RPP=31.2394;RPPR=228.843;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=104;SRP=228.843;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:4:4,0:4:152:0:0:0,-1.20412,-14.0446 0/0:50:50,0:50:1997:0:0:0,-15.0515,-179.925 0/1:32:26,6:26:1028:6:246:-12.8872,0,-83.1749 0/1:15:10,5:10:385:5:205:-14.3196,0,-30.4771 0/1:13:11,2:11:438:2:80:-3.6784,0,-35.8601 0/0:3:3,0:3:121:0:0:0,-0.90309,-11.28 dDocent_Contig_12928 19 . T C 296.883 . AB=0.555556;ABP=3.49285;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=76;DPB=76;DPRA=2.16667;EPP=29.068;EPPR=139.813;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=484;QR=2479;RO=63;RPL=0;RPP=29.068;RPPR=139.813;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=63;SRP=139.813;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:16,1:16:626:1:40:0,-1.12183,-52.6695 0/0:14:14,0:14:534:0:0:0,-4.21442,-48.3948 0/1:18:8,10:8:312:10:403:-31.2109,0,-23.0205 0/0:17:16,1:16:645:1:41:0,-1.02294,-54.2895 0/0:3:3,0:3:122:0:0:0,-0.90309,-11.3725 0/0:7:6,0:6:240:0:0:0,-1.80618,-21.5756 dDocent_Contig_12929 65 . T A 167.151 . AB=0.222222;ABP=27.1378;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=184;DPB=184;DPRA=2;EPP=7.18621;EPPR=62.0743;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.470588;PAO=0;PQA=0;PQR=0;PRO=0;QA=489;QR=6638;RO=170;RPL=13;RPP=31.2394;RPPR=372.161;RPR=0;RUN=1;SAF=9;SAP=7.18621;SAR=4;SRF=119;SRP=62.0743;SRR=51;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1327:0:0:0,-9.93399,-119.689 0/0:43:43,0:43:1678:0:0:0,-12.9443,-151.238 0/1:36:28,8:28:1075:8:319:-18.2378,0,-86.192 0/0:56:51,5:51:1962:5:170:0,-1.23563,-161.147 0/0:2:2,0:2:77:0:0:0,-0.60206,-7.3082 0/0:14:13,0:13:519:0:0:0,-3.91339,-46.806 dDocent_Contig_12930 8 . T C 156.565 . AB=0.126866;ABP=165.06;AC=2;AF=0.166667;AN=12;AO=24;CIGAR=1X;DP=445;DPB=445;DPRA=0.848485;EPP=55.1256;EPPR=917.2;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.333333;PAIREDR=0.496437;PAO=0;PQA=0;PQR=0;PRO=0;QA=921;QR=16094;RO=421;RPL=0;RPP=55.1256;RPPR=917.2;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=421;SRP=917.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:31,7:31:1165:7:266:-12.8614,0,-93.7079 0/0:72:71,1:71:2714:1:39:0,-17.7776,-240.551 0/1:96:86,10:86:3260:10:384:-6.01689,0,-264.646 0/0:74:68,6:68:2601:6:232:0,-1.02729,-213.035 0/0:53:53,0:53:2047:0:0:0,-15.9546,-184.461 0/0:112:112,0:112:4307:0:0:0,-33.7154,-387.697 dDocent_Contig_12932 34 . G C 603.358 . AB=0.791667;ABP=20.744;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1X;DP=225;DPB=225;DPRA=0.597015;EPP=44.2683;EPPR=450.334;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.7864;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.985437;PAO=0;PQA=0;PQR=0;PRO=0;QA=764;QR=7910;RO=206;RPL=0;RPP=44.2683;RPPR=450.334;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=206;SRP=450.334;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:11:11,0:11:425:0:0:0,-3.31133,-38.6021 0/0:62:62,0:62:2392:0:0:0,-18.6639,-215.472 0/0:32:32,0:32:1215:0:0:0,-9.63296,-109.634 0/0:95:95,0:95:3642:0:0:0,-28.5978,-327.872 0/0:1:1,0:1:39:0:0:0,-0.30103,-3.89656 0/1:24:5,19:5:197:19:764:-61.8583,0,-10.014 dDocent_Contig_12933 47 . C T 161.096 . AB=0.172414;ABP=57.0725;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=281;DPB=281;DPRA=1.32231;EPP=31.2394;EPPR=584.965;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9776;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0769231;PAIREDR=0.705224;PAO=0;PQA=0;PQR=0;PRO=0;QA=504;QR=10753;RO=268;RPL=0;RPP=31.2394;RPPR=584.965;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=268;SRP=584.965;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:36,2:36:1446:2:80:0,-3.84756,-122.8 0/1:58:48,10:48:1925:10:386:-17.6325,0,-155.987 0/0:17:17,0:17:686:0:0:0,-5.11751,-62.0664 0/0:39:39,0:39:1569:0:0:0,-11.7402,-141.434 0/0:65:65,0:65:2626:0:0:0,-19.5669,-236.454 0/0:64:63,1:63:2501:1:38:0,-15.4687,-221.42 dDocent_Contig_12934 112 . C T 1064.27 . AB=0.181287;ABP=455.629;AC=2;AF=0.166667;AN=12;AO=170;CIGAR=1X;DP=1566;DPB=1566;DPRA=2.62162;EPP=372.161;EPPR=3034.39;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.999284;PAO=0;PQA=0;PQR=0;PRO=0;QA=5369;QR=45319;RO=1396;RPL=0;RPP=372.161;RPPR=3034.39;RPR=170;RUN=1;SAF=0;SAP=372.161;SAR=170;SRF=0;SRP=3034.39;SRR=1396;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:350:319,31:319:10406:31:1002:0,-14.8854,-846.101 0/0:224:213,11:213:6865:11:349:0,-35.7124,-586.264 0/1:176:141,35:141:4509:35:1142:-50.0957,0,-353.023 0/0:111:111,0:111:3658:0:0:0,-33.4143,-329.442 0/0:368:333,35:333:10883:35:1090:0,-12.3964,-881.108 0/1:337:279,58:279:8998:58:1786:-59.5534,0,-708.445 dDocent_Contig_12935 23 . A T 3078.91 . AB=0.0945946;ABP=319.928;AC=0;AF=0;AN=12;AO=21;CIGAR=9M1X10M;DP=389;DPB=379.75;DPRA=0;EPP=48.6112;EPPR=474.22;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=841;QR=8293;RO=217;RPL=0;RPP=48.6112;RPPR=474.22;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=217;SRP=474.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:55:7,17,27,2:7:255:17,27,2:658,1041,82:-116.616,-64.6745,-80.3826,-33.2434,0,-45.9409,-111.954,-78.73,-47.2977,-132.178 0|0:46:18,20,0,7:18:692:20,0,7:792,0,280:-59.7889,0,-50.8057,-65.2075,-56.8263,-122.017,-42.139,-33.7541,-98.9506,-96.8434 0|0:29:12,11,2,4:12:445:11,2,4:416,79,152:-30.4764,0,-33.0845,-27.5863,-29.8928,-63.386,-21.6248,-23.9304,-51.523,-56.8212 0|0:69:43,7,17,0:43:1653:7,17,0:280,636,0:-39.1288,-28.9979,-162.606,0,-112.647,-130.597,-52.0731,-164.713,-135.715,-187.78 0|0:98:79,12,0,0:79:3023:12,0,0:471,0,0:-15.0325,0,-244.552,-38.8139,-248.164,-286.901,-38.8139,-248.164,-286.901,-286.901 0|0:92:58,23,1,8:58:2225:23,1,8:917,40,327:-58.0701,0,-175.7,-72.2345,-179.328,-254.547,-48.5411,-155.636,-227.862,-228.749 dDocent_Contig_12936 87 . T A 65.2989 . AB=0.333333;ABP=7.35324;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=112;DPB=112;DPRA=1.94737;EPP=20.3821;EPPR=228.843;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.980769;PAO=0;PQA=0;PQR=0;PRO=0;QA=161;QR=2872;RO=104;RPL=8;RPP=20.3821;RPPR=228.843;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=104;SRP=228.843;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:283:0:0:0,-3.0103,-25.7486 0/0:22:22,0:22:582:0:0:0,-6.62266,-52.639 0/0:28:27,1:27:704:1:7:0,-7.72884,-62.9128 0/0:28:27,1:27:776:1:7:0,-7.72884,-69.4166 0/1:18:12,6:12:348:6:147:-8.05275,0,-26.1868 0/0:6:6,0:6:179:0:0:0,-1.80618,-16.4054 dDocent_Contig_12937 48 . G A 4376.72 . AB=0.354271;ABP=76.4257;AC=6;AF=0.6;AN=10;AO=159;CIGAR=1X;DP=416;DPB=416;DPRA=0;EPP=3.35173;EPPR=561.079;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6260;QR=9978;RO=257;RPL=77;RPP=3.35173;RPPR=561.079;RPR=82;RUN=1;SAF=159;SAP=348.274;SAR=0;SRF=257;SRP=561.079;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:50:40,10:40:1549:10:400:-21.3082,0,-124.592 0/1:104:50,54:50:1917:54:2134:-160.945,0,-141.428 0/1:140:95,45:95:3745:45:1762:-116.664,0,-294.934 0/1:104:72,32:72:2767:32:1253:-81.7412,0,-217.848 1/1:18:0,18:0:0:18:711:-64.3148,-5.41854,0 ./.:.:.:.:.:.:.:. dDocent_Contig_12938 32 . T A 6101.81 . AB=0.456221;ABP=10.2352;AC=2;AF=0.166667;AN=12;AO=198;CIGAR=3M1X;DP=591;DPB=582.5;DPRA=2.76433;EPP=432.962;EPPR=815.141;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7919;QR=14934;RO=374;RPL=0;RPP=432.962;RPPR=815.141;RPR=198;RUN=1;SAF=198;SAP=432.962;SAR=0;SRF=374;SRP=815.141;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:49:46,3,0:46:1825:3,0:119,0:0,-3.65546,-153.372,-13.8474,-154.275,-164.071 0|0:69:52,13,4:52:2076:13,4:518,163:-26.9944,0,-167.058,-29.1985,-157.523,-198.974 0|0:51:51,0,0:51:2024:0,0:0,0:0,-15.3525,-182.36,-15.3525,-182.36,-182.36 0|0:57:56,1,0:56:2228:1,0:34,0:0,-13.7598,-197.301,-16.8577,-197.602,-200.359 0|1:184:88,0,96:88:3526:0,96:0,3812:-287.704,-314.195,-604.681,0,-290.885,-261.987 0|1:181:81,0,98:81:3255:0,98:0,3944:-300.705,-325.088,-593.318,0,-268.275,-238.774 dDocent_Contig_12939 7 . A T 748.215 . AB=0.16358;ABP=321.52;AC=6;AF=0.5;AN=12;AO=53;CIGAR=1X;DP=324;DPB=324;DPRA=0;EPP=118.098;EPPR=591.479;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.811321;PAIREDR=0.560886;PAO=0;PQA=0;PQR=0;PRO=0;QA=2016;QR=9842;RO=271;RPL=0;RPP=118.098;RPPR=591.479;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=271;SRP=591.479;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:61:53,8:53:1917:8:303:-9.26358,0,-154.427 0/1:57:48,9:48:1753:9:336:-13.4327,0,-140.876 0/1:62:46,16:46:1671:16:621:-37.5662,0,-131.997 0/1:67:56,11:56:2050:11:409:-16.9839,0,-164.585 0/1:32:28,4:28:1014:4:155:-4.69248,0,-81.9369 0/1:45:40,5:40:1437:5:192:-4.10366,0,-116.072 dDocent_Contig_12941 61 . T C 5069.51 . AB=0.70283;ABP=78.766;AC=7;AF=0.583333;AN=12;AO=164;CIGAR=1X;DP=227;DPB=227;DPRA=0;EPP=359.132;EPPR=139.813;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6425;QR=2340;RO=63;RPL=164;RPP=359.132;RPPR=139.813;RPR=0;RUN=1;SAF=164;SAP=359.132;SAR=0;SRF=63;SRP=139.813;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:15:0,15:0:0:15:579:-52.4478,-4.51545,0 0/1:38:13,25:13:465:25:973:-76.434,0,-30.7399 0/1:28:7,21:7:274:21:809:-64.6938,0,-16.5993 0/1:20:11,9:11:413:9:354:-26.1993,0,-31.4941 0/1:54:12,42:12:456:42:1658:-133.201,0,-25.1272 0/1:72:20,52:20:732:52:2052:-163.197,0,-44.5192 dDocent_Contig_12942 40 . T C 7893.24 . AB=0.67655;ABP=103.454;AC=6;AF=0.5;AN=12;AO=251;CIGAR=1X;DP=371;DPB=371;DPRA=0;EPP=548.05;EPPR=254.973;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.0478088;PAIREDR=0.891667;PAO=0;PQA=0;PQR=0;PRO=0;QA=10106;QR=4792;RO=120;RPL=0;RPP=548.05;RPPR=254.973;RPR=251;RUN=1;SAF=251;SAP=548.05;SAR=0;SRF=120;SRP=263.587;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:51:7,44:7:283:44:1734:-140.915,0,-10.4905 0/1:114:17,97:17:665:97:3932:-319.528,0,-25.8577 0/1:39:31,8:31:1257:8:323:-17.6984,0,-101.654 0/1:113:18,95:18:724:95:3831:-310.761,0,-31.4688 0/1:18:14,4:14:552:4:163:-9.63989,0,-44.597 0/1:36:33,3:33:1311:3:123:-0.627708,0,-107.411 dDocent_Contig_12943 49 . T G 3973.31 . AB=0.191667;ABP=102.102;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1M2D8M1X6M;DP=196;DPB=184.722;DPRA=5.45455;EPP=52.9542;EPPR=109.412;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=853;QR=1799;RO=49;RPL=0;RPP=52.9542;RPPR=109.412;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=49;SRP=109.412;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:33:19,0,0,12:19:695:0,0,12:0,0,438:-30.2274,-35.947,-92.7588,-35.947,-92.7588,-92.7588,0,-56.9722,-56.9722,-53.3599 0|0:10:9,0,0,0:9:332:0,0,0:0,0,0:0,-2.70927,-29.8334,-2.70927,-29.8334,-29.8334,-2.70927,-29.8334,-29.8334,-29.8334 0|0:12:12,0,0,0:12:450:0,0,0:0,0,0:0,-3.61236,-40.8469,-3.61236,-40.8469,-40.8469,-3.61236,-40.8469,-40.8469,-40.8469 0|0:21:5,0,0,16:5:186:0,0,16:0,0,620:-49.8126,-51.3178,-66.5386,-51.3178,-66.5386,-66.5386,0,-15.5962,-15.5962,-10.7798 1|0:64:1,14,41,8:1:37:14,41,8:520,1575,287:-168.505,-126.268,-125.08,-39.5202,0,-30.2051,-145.405,-105.894,-19.1471,-146.023 1|0:56:3,9,44,0:3:99:9,44,0:333,1678,0:-156.008,-129.676,-134.967,-19.2728,0,-14.0208,-156.911,-137.676,-27.2661,-164.911 dDocent_Contig_12944 58 . G A 50.5669 . AB=0.2;ABP=14.7363;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=223;DPB=223;DPRA=0.360577;EPP=9.52472;EPPR=480.734;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.981818;PAO=0;PQA=0;PQR=0;PRO=0;QA=119;QR=8600;RO=220;RPL=3;RPP=9.52472;RPPR=480.734;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=220;SRP=480.734;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:880:0:0:0,-6.92369,-79.5201 0/0:44:44,0:44:1681:0:0:0,-13.2453,-151.552 0/0:22:22,0:22:849:0:0:0,-6.62266,-76.7123 0/0:30:30,0:30:1175:0:0:0,-9.0309,-106.024 0/0:89:89,0:89:3554:0:0:0,-26.7917,-319.892 0/1:15:12,3:12:461:3:119:-6.57956,0,-37.3194 dDocent_Contig_12945 15 . A G 569.805 . AB=0.170984;ABP=184.48;AC=3;AF=0.25;AN=12;AO=35;CIGAR=1X;DP=346;DPB=346;DPRA=2.58929;EPP=79.0118;EPPR=678.338;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1406;QR=12532;RO=311;RPL=0;RPP=79.0118;RPPR=678.338;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=311;SRP=678.338;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:77:61,16:61:2463:16:644:-35.112,0,-198.627 0/1:33:28,5:28:1129:5:192:-7.71513,0,-91.9593 0/1:83:71,12:71:2852:12:489:-19.3752,0,-231.789 0/0:97:95,2:95:3827:2:81:0,-21.5142,-336.733 0/0:9:9,0:9:360:0:0:0,-2.70927,-32.7606 0/0:47:47,0:47:1901:0:0:0,-14.1484,-171.287 dDocent_Contig_12946 53 . A C 1521.02 . AB=0.360759;ABP=29.6177;AC=3;AF=0.25;AN=12;AO=62;CIGAR=1X;DP=290;DPB=290;DPRA=0;EPP=137.642;EPPR=498.106;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2466;QR=9064;RO=228;RPL=62;RPP=137.642;RPPR=498.106;RPR=0;RUN=1;SAF=62;SAP=137.642;SAR=0;SRF=228;SRP=498.106;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:46:22,24:22:865:24:959:-72.7592,0,-64.3138 0/1:64:48,16:48:1905:16:638:-38.4843,0,-152.396 0/0:46:43,3:43:1706:3:119:0,-2.75288,-142.669 0/1:48:31,17:31:1216:17:669:-46.0804,0,-95.2651 0/0:32:31,1:31:1249:1:40:0,-5.63728,-108.685 0/0:54:53,1:53:2123:1:41:0,-12.1611,-187.153 dDocent_Contig_12947 48 . C A 49.6969 . AB=0.138889;ABP=43.7857;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=148;DPB=148;DPRA=0.525773;EPP=16.0391;EPPR=302.735;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=215;QR=5691;RO=142;RPL=0;RPP=16.0391;RPPR=302.735;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=142;SRP=311.359;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:66:66,0:66:2651:0:0:0,-19.868,-238.705 0/0:25:25,0:25:1005:0:0:0,-7.52575,-90.7426 0/0:15:14,1:14:544:1:18:0,-2.71548,-47.5015 0/1:32:29,3:29:1166:3:116:-1.18458,0,-95.5858 0/0:6:6,0:6:243:0:0:0,-1.80618,-22.248 0/1:4:2,2:2:82:2:81:-6.48161,0,-6.57556 dDocent_Contig_12948 35 . G A 61.9645 . AB=0.125;ABP=81.1833;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=344;DPB=344;DPRA=1.15596;EPP=22.5536;EPPR=730.454;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.888889;PAIREDR=0.850746;PAO=0;PQA=0;PQR=0;PRO=0;QA=334;QR=13152;RO=335;RPL=0;RPP=22.5536;RPPR=730.454;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=335;SRP=730.454;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1154:0:0:0,-9.0309,-104.139 0/0:62:61,1:61:2421:1:38:0,-14.8666,-214.258 0/0:26:26,0:26:1032:0:0:0,-7.82678,-93.1755 0/1:64:56,8:56:2174:8:296:-7.71933,0,-176.587 0/0:58:58,0:58:2281:0:0:0,-17.4597,-205.475 0/0:104:104,0:104:4090:0:0:0,-31.3071,-368.114 dDocent_Contig_12949 106 . N T 163.713 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=2X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=164;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 .:.:.:.:.:.:.:. 1|1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1|1:3:0,3:0:0:3:94:-8.77067,-0.90309,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_12951 13 . T G 1161.18 . AB=0.246637;ABP=127.349;AC=5;AF=0.416667;AN=12;AO=56;CIGAR=1X;DP=254;DPB=254;DPRA=0;EPP=124.613;EPPR=432.962;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.946429;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2159;QR=7632;RO=198;RPL=0;RPP=124.613;RPPR=432.962;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=198;SRP=432.962;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:47:31,16:31:1222:16:618:-41.8093,0,-96.1137 0/1:53:42,11:42:1635:11:422:-22.3748,0,-131.449 0/1:39:34,5:34:1286:5:192:-5.90688,0,-104.275 0/1:64:44,20:44:1675:20:770:-50.3588,0,-131.735 0/0:31:30,1:30:1160:1:40:0,-5.33625,-100.701 0/1:20:17,3:17:654:3:117:-4.88978,0,-53.1703 dDocent_Contig_12952 24 . G T 3557.88 . AB=0.413333;ABP=22.5825;AC=3;AF=0.25;AN=12;AO=124;CIGAR=1X;DP=342;DPB=342;DPRA=7.14286;EPP=272.273;EPPR=474.22;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5005;QR=8627;RO=217;RPL=0;RPP=272.273;RPPR=474.22;RPR=124;RUN=1;SAF=124;SAP=272.273;SAR=0;SRF=217;SRP=474.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:361:0:0:0,-2.70927,-32.853 0/0:7:7,0:7:283:0:0:0,-2.10721,-25.843 0/1:15:12,3:12:464:3:123:-6.94934,0,-37.581 0/0:26:26,0:26:1019:0:0:0,-7.82678,-91.9964 0/1:194:92,101:92:3687:101:4078:-308.777,0,-273.636 0/1:91:71,20:71:2813:20:804:-45.2834,0,-225.872 dDocent_Contig_12953 12 . T C 2661.93 . AB=0.271144;ABP=185.889;AC=3;AF=0.25;AN=12;AO=118;CIGAR=1X;DP=641;DPB=641;DPRA=2.00391;EPP=259.244;EPPR=1138.69;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4716;QR=19441;RO=523;RPL=0;RPP=259.244;RPPR=1138.69;RPR=118;RUN=1;SAF=118;SAP=259.244;SAR=0;SRF=523;SRP=1138.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:87:27,60:27:975:60:2388:-188.884,0,-61.8584 0/0:111:102,9:102:3836:9:364:0,-0.290448,-312.238 0/1:124:104,20:104:3874:20:797:-34.7182,0,-311.451 0/1:191:162,29:162:6056:29:1167:-47.8122,0,-487.506 0/0:69:69,0:69:2520:0:0:0,-20.7711,-227.007 0/0:59:59,0:59:2180:0:0:0,-17.7608,-196.429 dDocent_Contig_12954 32 . G A 207.868 . AB=0.203704;ABP=44.1879;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=191;DPB=191;DPRA=0.788321;EPP=26.8965;EPPR=393.875;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.727273;PAIREDR=0.483333;PAO=0;PQA=0;PQR=0;PRO=0;QA=439;QR=7144;RO=180;RPL=0;RPP=26.8965;RPPR=393.875;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=180;SRP=393.875;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:31,0:31:1249:0:0:0,-9.33193,-112.679 0/0:50:50,0:50:1990:0:0:0,-15.0515,-179.293 0/0:24:24,0:24:941:0:0:0,-7.22472,-84.9847 0/0:32:32,0:32:1278:0:0:0,-9.63296,-115.288 0/1:22:17,5:17:659:5:201:-11.8479,0,-53.0085 0/1:32:26,6:26:1027:6:238:-12.1608,0,-83.0888 dDocent_Contig_12955 94 . C A 5350.81 . AB=0.632979;ABP=31.8863;AC=8;AF=0.666667;AN=12;AO=196;CIGAR=1X;DP=268;DPB=268;DPRA=0;EPP=428.619;EPPR=159.356;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.986111;PAO=0;PQA=0;PQR=0;PRO=0;QA=6745;QR=2483;RO=72;RPL=196;RPP=428.619;RPPR=159.356;RPR=0;RUN=1;SAF=196;SAP=428.619;SAR=0;SRF=72;SRP=159.356;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:49:18,31:18:597:31:1038:-78.9739,0,-39.2914 0/1:21:10,11:10:348:11:380:-28.2114,0,-25.3344 0/1:32:15,17:15:531:17:590:-43.7933,0,-38.49 0/1:86:26,60:26:900:60:2055:-159.329,0,-55.425 1/1:36:0,36:0:0:36:1250:-112.801,-10.8371,0 1/1:44:3,41:3:107:41:1432:-119.194,-3.26315,0 dDocent_Contig_12957 15 . T C 94.8143 . AB=0;ABP=0;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=2X5M;DP=1098;DPB=1098;DPRA=0.72167;EPP=16.0391;EPPR=1898.43;GTI=0;LEN=1;MEANALT=4;MQM=39.5;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0;PAIREDR=0.967774;PAO=0;PQA=0;PQR=0;PRO=0;QA=202;QR=38821;RO=993;RPL=0;RPP=16.0391;RPPR=2159.28;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=962;SRP=1898.43;SRR=31;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:85:70,0,3,5,5:70:2745:0,3,5,5:0,114,166,171:0,-21.0721,-246.85,-11.9424,-237.729,-236.826,-7.64548,-233.423,-224.302,-231.918,-7.6272,-233.405,-224.284,-219.979,-231.9 0|0:157:152,2,0,0,1:152:5942:2,0,0,1:79,0,0,31:0,-39.234,-527.185,-45.7566,-527.787,-534.289,-45.7566,-527.787,-534.289,-534.289,-43.5589,-525.57,-532.071,-532.071,-531.77 0|0:114:113,0,0,0,0:113:4404:0,0,0,0:0,0,0,0:0,-34.0164,-395.953,-34.0164,-395.953,-395.953,-34.0164,-395.953,-395.953,-395.953,-34.0164,-395.953,-395.953,-395.953,-395.953 0|0:139:127,10,2,0,0:127:4971:10,2,0,0:394,70,0,0:0,-5.76195,-411.544,-33.0869,-409.399,-441.204,-38.2308,-414.554,-441.807,-446.962,-38.2308,-414.554,-441.807,-446.962,-446.962 0|0:250:219,0,16,7,0:219:8560:0,16,7,0:0,639,241,0:0,-65.9256,-769.663,-13.2791,-717.031,-712.214,-46.6486,-750.374,-697.742,-748.267,-65.9256,-769.663,-717.031,-750.374,-769.663 0|1:353:312,0,33,4,0:312:12199:0,33,4,0:0,1282,141,0:-11.0043,-104.926,-1107.84,0,-1002.93,-992.994,-93.8543,-1096.77,-991.853,-1095.56,-104.926,-1107.84,-1002.93,-1096.77,-1107.84 dDocent_Contig_12958 14 . T C 79.1279 . AB=0.133333;ABP=73.0765;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=213;DPB=213;DPRA=1.275;EPP=26.8965;EPPR=439.476;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.818182;PAIREDR=0.562189;PAO=0;PQA=0;PQR=0;PRO=0;QA=433;QR=8069;RO=201;RPL=0;RPP=26.8965;RPPR=439.476;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=201;SRP=439.476;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:31,4:31:1231:4:162:-4.4307,0,-100.525 0/0:48:47,1:47:1873:1:41:0,-10.3549,-164.683 0/1:25:21,4:21:850:4:154:-6.70367,0,-69.2858 0/0:45:43,2:43:1719:2:76:0,-6.33168,-147.713 0/0:17:17,0:17:690:0:0:0,-5.11751,-62.4285 0/0:43:42,0:42:1706:0:0:0,-12.6433,-153.5 dDocent_Contig_12959 16 . G A 580.819 . AB=0.181818;ABP=157.777;AC=4;AF=0.333333;AN=12;AO=34;CIGAR=1X;DP=301;DPB=301;DPRA=0.803333;EPP=76.8404;EPPR=574.14;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992509;PAO=0;PQA=0;PQR=0;PRO=0;QA=1376;QR=10656;RO=267;RPL=0;RPP=76.8404;RPPR=582.793;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=266;SRP=574.14;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:15:9,6:9:361:6:239:-17.3684,0,-28.3382 0/1:83:66,17:66:2618:17:689:-37.354,0,-210.768 0/1:8:7,1:7:280:1:41:-1.68633,0,-23.1633 0/1:70:62,8:62:2476:8:325:-8.54753,0,-201.909 0/0:65:63,2:63:2516:2:82:0,-11.7873,-218.798 0/0:60:60,0:60:2405:0:0:0,-18.0618,-216.598 dDocent_Contig_12960 47 . A T 52.2722 . AB=0.0993377;ABP=213.557;AC=2;AF=0.166667;AN=12;AO=25;CIGAR=1X;DP=429;DPB=429;DPRA=1.08889;EPP=57.2971;EPPR=878.114;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.64;PAIREDR=0.615385;PAO=0;PQA=0;PQR=0;PRO=0;QA=994;QR=15901;RO=403;RPL=0;RPP=57.2971;RPPR=878.114;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=403;SRP=878.114;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:55:55,0:55:2185:0:0:0,-16.5566,-196.831 0/0:62:58,4:58:2278:4:163:0,-3.60543,-190.135 0/0:81:75,6:75:2875:6:242:0,-2.22648,-236.714 0/1:67:60,7:60:2382:7:263:-3.8487,0,-194.362 0/1:84:75,8:75:3013:8:326:-4.59916,0,-246.176 0/0:80:80,0:80:3168:0:0:0,-24.0824,-285.203 dDocent_Contig_12962 20 . C T 106.206 . AB=0.116071;ABP=146.405;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=384;DPB=384;DPRA=1.12712;EPP=39.9253;EPPR=799.941;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.934605;PAO=0;PQA=0;PQR=0;PRO=0;QA=678;QR=14609;RO=367;RPL=0;RPP=39.9253;RPPR=799.941;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=367;SRP=799.941;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:47:46,1:46:1830:1:40:0,-10.1527,-160.915 0/1:72:63,9:63:2507:9:356:-10.7282,0,-204.093 0/1:40:36,4:36:1451:4:164:-3.1087,0,-118.794 0/0:107:104,3:104:4154:3:118:0,-21.208,-362.817 0/0:76:76,0:76:2997:0:0:0,-22.8783,-269.823 0/0:42:42,0:42:1670:0:0:0,-12.6433,-150.52 dDocent_Contig_12963 39 . C T 658.093 . AB=0.172414;ABP=30.0414;AC=6;AF=0.5;AN=12;AO=22;CIGAR=1X;DP=78;DPB=78;DPRA=0.58;EPP=50.7827;EPPR=124.613;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.454545;PAIREDR=0.982143;PAO=0;PQA=0;PQR=0;PRO=0;QA=878;QR=2254;RO=56;RPL=0;RPP=50.7827;RPPR=124.613;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=56;SRP=124.613;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:13:12,1:12:471:1:35:0,-0.414761,-39.2341 0/0:20:20,0:20:815:0:0:0,-6.0206,-73.664 0/1:9:6,3:6:239:3:120:-8.47804,0,-19.1746 0/1:20:18,2:18:729:2:81:-1.66513,0,-59.9138 1/1:13:0,13:0:0:13:519:-47.0557,-3.91339,0 1/1:3:0,3:0:0:3:123:-11.4648,-0.90309,0 dDocent_Contig_12964 98 . N C 65.5375 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=69;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_12965 13 . A G 2538.69 . AB=0.533742;ABP=4.62225;AC=6;AF=0.5;AN=12;AO=87;CIGAR=1X;DP=163;DPB=163;DPRA=0;EPP=191.928;EPPR=168.042;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.644737;PAO=0;PQA=0;PQR=0;PRO=0;QA=3468;QR=3012;RO=76;RPL=0;RPP=191.928;RPPR=168.042;RPR=87;RUN=1;SAF=87;SAP=191.928;SAR=0;SRF=76;SRP=168.042;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:15:8,7:8:317:7:285:-21.509,0,-24.3784 0/1:44:28,16:28:1106:16:652:-45.7674,0,-86.5821 0/1:30:20,10:20:790:10:396:-26.964,0,-62.391 0/1:41:13,28:13:515:28:1119:-88.6525,0,-34.3524 0/1:4:2,2:2:82:2:81:-6.48161,0,-6.57556 0/1:29:5,24:5:202:24:935:-75.7164,0,-9.83221 dDocent_Contig_12966 19 . A G 629.966 . AB=0.244094;ABP=75.2502;AC=4;AF=0.333333;AN=12;AO=33;CIGAR=1X;DP=229;DPB=229;DPRA=0.795652;EPP=74.6689;EPPR=428.619;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.848485;PAIREDR=0.913265;PAO=0;PQA=0;PQR=0;PRO=0;QA=1269;QR=7453;RO=196;RPL=0;RPP=74.6689;RPPR=428.619;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=196;SRP=428.619;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:52:43,9:43:1621:9:333:-14.6643,0,-130.486 0/0:56:54,2:54:2054:2:80:0,-9.2661,-177.494 0/0:46:46,0:46:1758:0:0:0,-13.8474,-158.455 0/1:43:30,13:30:1149:13:512:-33.4848,0,-90.7552 0/1:13:7,6:7:270:6:227:-16.8789,0,-20.7517 0/1:19:16,3:16:601:3:117:-5.19034,0,-48.697 dDocent_Contig_12967 185 . G A 621.169 . AB=0.333333;ABP=23.2774;AC=6;AF=0.5;AN=12;AO=28;CIGAR=1X;DP=84;DPB=84;DPRA=0;EPP=63.8115;EPPR=124.613;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.785714;PAIREDR=0.910714;PAO=0;PQA=0;PQR=0;PRO=0;QA=1071;QR=2237;RO=56;RPL=28;RPP=63.8115;RPPR=124.613;RPR=0;RUN=1;SAF=0;SAP=63.8115;SAR=28;SRF=0;SRP=124.613;SRR=56;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:7:5,2:5:201:2:80:-5.48436,0,-16.3633 0/1:3:2,1:2:80:1:41:-3.19148,0,-6.6887 0/1:12:6,6:6:244:6:227:-17.1756,0,-18.7265 0/1:11:6,5:6:245:5:177:-12.958,0,-19.1181 0/1:28:17,11:17:686:11:427:-30.3525,0,-53.6396 0/1:23:20,3:20:781:3:119:-4.1717,0,-63.6759 dDocent_Contig_12968 98 . N T 1310.69 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=59;CIGAR=1X;DP=60;DPB=60;DPRA=0;EPP=131.127;EPPR=0;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1436;QR=0;RO=0;RPL=59;RPP=131.127;RPPR=0;RPR=0;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:14:0,14:0:0:14:350:-31.7456,-4.21442,0 1/1:25:0,24:0:0:24:535:-48.2905,-7.22472,0 1/1:14:0,14:0:0:14:371:-33.6493,-4.21442,0 1/1:2:0,2:0:0:2:42:-3.98985,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:138:-12.6945,-1.50515,0 dDocent_Contig_12970 59 . G A 75.2388 . AB=0.159091;ABP=47.4268;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=225;DPB=225;DPRA=1.35821;EPP=22.5536;EPPR=463.403;GTI=0;LEN=1;MEANALT=1;MQM=59.8889;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.490741;PAO=0;PQA=0;PQR=0;PRO=0;QA=323;QR=8039;RO=216;RPL=6;RPP=5.18177;RPPR=34.5369;RPR=3;RUN=1;SAF=6;SAP=5.18177;SAR=3;SRF=135;SRP=32.3252;SRR=81;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1225:0:0:0,-9.93399,-110.523 0/0:37:37,0:37:1379:0:0:0,-11.1381,-124.375 0/0:16:16,0:16:597:0:0:0,-4.81648,-54.0555 0/0:48:48,0:48:1811:0:0:0,-14.4494,-163.227 0/0:47:45,2:45:1614:2:79:0,-6.65078,-138.009 0/1:44:37,7:37:1413:7:244:-9.04676,0,-114.191 dDocent_Contig_12971 54 . G T 830.251 . AB=0.390625;ABP=9.66043;AC=6;AF=0.5;AN=12;AO=31;CIGAR=1X;DP=102;DPB=102;DPRA=1.36923;EPP=70.3259;EPPR=157.185;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1197;QR=2816;RO=71;RPL=31;RPP=70.3259;RPPR=157.185;RPR=0;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=71;SRP=157.185;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:19,1:19:763:1:41:0,-1.92603,-64.896 0/1:19:16,3:16:633:3:118:-5.28294,0,-51.5852 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 0/1:45:23,22:23:916:22:836:-61.9941,0,-69.2025 1/1:4:0,4:0:0:4:161:-14.8749,-1.20412,0 0/0:13:13,0:13:504:0:0:0,-3.91339,-45.7021 dDocent_Contig_12973 46 . A T 2719.89 . AB=0.173745;ABP=242.468;AC=3;AF=0.25;AN=12;AO=45;CIGAR=1X3M1D20M;DP=316;DPB=310;DPRA=2.49038;EPP=100.727;EPPR=354.789;GTI=0;LEN=1;MEANALT=4.75;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1794;QR=6082;RO=162;RPL=45;RPP=100.727;RPPR=354.789;RPR=0;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=162;SRP=354.789;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:68:44,12,6,4,0,0:44:1642:12,6,4,0,0:479,241,163,0,0:-26.2166,0,-130.823,-19.599,-114.574,-152.224,-26.0107,-120.986,-140.581,-159.237,-39.462,-134.436,-154.03,-160.442,-173.891,-39.462,-134.436,-154.03,-160.442,-173.891,-173.891 0|1:54:33,11,7,1,0,0:33:1227:11,7,1,0,0:440,285,41,0,0:-26.3098,0,-97.0904,-12.7304,-76.8857,-111.03,-32.8593,-97.0169,-109.752,-132.966,-36.2438,-100.402,-113.137,-133.267,-136.651,-36.2438,-100.402,-113.137,-133.267,-136.651,-136.651 0|0:67:38,6,9,8,0,4:38:1469:6,9,8,0,4:245,366,317,0,156:-18.7632,-9.9791,-128.844,0,-100.456,-117.965,-4.10536,-104.557,-94.5816,-122.368,-30.2023,-130.65,-120.675,-124.776,-150.868,-17.3774,-117.826,-107.851,-111.952,-138.044,-136.84 0|1:70:46,16,0,0,0,7:46:1706:16,0,0,0,7:630,0,0,0,282:-37.9733,0,-134.75,-51.8207,-139.566,-191.395,-51.8207,-139.566,-191.395,-191.395,-51.8207,-139.566,-191.395,-191.395,-191.395,-28.5743,-116.319,-168.149,-168.149,-168.149,-166.042 0|0:31:0,0,0,24,7,0:0:0:0,0,24,7,0:0,0,947,280,0:-101.372,-101.372,-101.372,-101.372,-101.372,-101.372,-23.4646,-23.4646,-23.4646,-16.2398,-78.3062,-78.3062,-78.3062,0,-76.199,-101.372,-101.372,-101.372,-23.4646,-78.3062,-101.372 0|0:26:1,0,1,2,22,0:1:38:0,1,2,22,0:0,36,80,823,0:-70.5748,-70.8759,-73.9926,-67.9391,-71.0558,-70.7547,-64.2836,-67.4004,-64.4636,-66.7983,-3.5078,-6.62266,-3.69352,-0.0176023,0,-70.8759,-73.9926,-71.0558,-67.4004,-6.62266,-73.9926 dDocent_Contig_12975 87 . G C 210.015 . AB=0.186667;ABP=66.9674;AC=3;AF=0.25;AN=12;AO=15;CIGAR=1X;DP=209;DPB=209;DPRA=0.504808;EPP=35.5824;EPPR=424.276;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.649485;PAO=0;PQA=0;PQR=0;PRO=0;QA=562;QR=7373;RO=194;RPL=7;RPP=3.15506;RPPR=3.0103;RPR=8;RUN=1;SAF=7;SAP=3.15506;SAR=8;SRF=97;SRP=3.0103;SRR=97;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:29,1:29:1099:1:32:0,-5.83159,-96.0062 0/1:30:26,4:26:988:4:153:-5.10939,0,-80.1814 0/1:13:7,6:7:276:6:218:-16.0554,0,-21.2946 0/1:32:28,4:28:1041:4:159:-5.05848,0,-84.3575 0/0:48:48,0:48:1846:0:0:0,-14.4494,-166.376 0/0:56:56,0:56:2123:0:0:0,-16.8577,-191.286 dDocent_Contig_12977 90 . T G 4990.97 . AB=0.497436;ABP=3.03257;AC=6;AF=0.5;AN=12;AO=194;CIGAR=1X;DP=390;DPB=390;DPRA=0;EPP=424.276;EPPR=426.447;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.747423;PAIREDR=0.717949;PAO=0;PQA=0;PQR=0;PRO=0;QA=6955;QR=6862;RO=195;RPL=194;RPP=424.276;RPPR=426.447;RPR=0;RUN=1;SAF=194;SAP=424.276;SAR=0;SRF=195;SRP=426.447;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:71:27,44:27:942:44:1564:-119.679,0,-63.7203 0/1:58:31,27:31:1073:27:946:-67.9939,0,-79.416 0/1:53:25,28:25:865:28:1018:-75.9798,0,-62.2023 0/1:61:43,17:43:1548:17:621:-37.7937,0,-121.175 0/1:72:52,20:52:1824:20:709:-42.4599,0,-142.766 0/1:75:17,58:17:610:58:2097:-166.412,0,-32.6522 dDocent_Contig_12978 35 . T C 1304.56 . AB=0.542169;ABP=4.29225;AC=5;AF=0.416667;AN=12;AO=45;CIGAR=1X;DP=97;DPB=97;DPRA=1.18571;EPP=100.727;EPPR=115.927;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.822222;PAIREDR=0.865385;PAO=0;PQA=0;PQR=0;PRO=0;QA=1809;QR=2084;RO=52;RPL=0;RPP=100.727;RPPR=115.927;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=52;SRP=115.927;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:557:0:0:0,-4.21442,-50.4725 0/1:30:12,18:12:490:18:724:-56.4555,0,-35.42 0/1:13:10,3:10:402:3:123:-7.5514,0,-32.6249 0/1:19:12,7:12:478:7:285:-20.3048,0,-37.6509 0/1:6:1,5:1:40:5:191:-15.7456,0,-2.1895 0/1:15:3,12:3:117:12:486:-39.5756,0,-6.39313 dDocent_Contig_12979 10 . T C 5581.94 . AB=0.293671;ABP=295.131;AC=6;AF=0.5;AN=12;AO=232;CIGAR=1X;DP=790;DPB=790;DPRA=0;EPP=506.792;EPPR=1214.69;GTI=0;LEN=1;MEANALT=1;MQM=59.7328;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.856631;PAO=0;PQA=0;PQR=0;PRO=0;QA=8973;QR=21655;RO=558;RPL=0;RPP=506.792;RPPR=1214.69;RPR=232;RUN=1;SAF=232;SAP=506.792;SAR=0;SRF=558;SRP=1214.69;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:106:77,29:77:2965:29:1108:-68.1112,0,-235.086 0/1:153:101,52:101:3893:52:2028:-136.683,0,-304.371 0/1:85:47,38:47:1813:38:1457:-105.819,0,-137.814 0/1:144:85,59:85:3330:59:2291:-161.092,0,-256.438 0/1:158:126,32:126:4920:32:1236:-63.9691,0,-395.203 0/1:144:122,22:122:4734:22:853:-33.7408,0,-382.695 dDocent_Contig_12980 20 . C G 34.9362 . AB=0.105263;ABP=105.87;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=455;DPB=455;DPRA=1.59684;EPP=26.8965;EPPR=964.973;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=396;QR=17712;RO=443;RPL=0;RPP=26.8965;RPPR=964.973;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=443;SRP=964.973;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:58:58,0:58:2306:0:0:0,-17.4597,-207.705 0/1:76:68,8:68:2716:8:306:-5.01636,0,-221.681 0/0:126:122,3:122:4870:3:90:0,-29.611,-429.778 0/0:93:93,0:93:3729:0:0:0,-27.9958,-335.62 0/0:73:73,0:73:2923:0:0:0,-21.9752,-263.164 0/0:29:29,0:29:1168:0:0:0,-8.72987,-105.399 dDocent_Contig_12981 8 . G A 469.513 . AB=0.154472;ABP=258.114;AC=4;AF=0.333333;AN=12;AO=43;CIGAR=1X;DP=402;DPB=402;DPRA=0;EPP=96.3836;EPPR=782.569;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.27907;PAIREDR=0.222841;PAO=0;PQA=0;PQR=0;PRO=0;QA=1591;QR=13782;RO=359;RPL=0;RPP=96.3836;RPPR=782.569;RPR=43;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=359;SRP=782.569;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:70:63,7:63:2438:7:262:-2.86551,0,-198.551 0/0:92:91,1:91:3468:1:37:0,-23.9969,-308.558 0/1:63:57,6:57:2193:6:221:-1.27919,0,-178.627 0/0:64:60,4:60:2290:4:153:0,-5.12431,-192.174 0/1:60:50,10:50:1940:10:368:-15.4046,0,-156.777 0/1:53:38,15:38:1453:15:550:-33.88,0,-115.091 dDocent_Contig_12982 15 . C G 1363.7 . AB=0.638889;ABP=9.04217;AC=4;AF=0.333333;AN=12;AO=42;CIGAR=1X;DP=109;DPB=109;DPRA=1.01852;EPP=94.2121;EPPR=148.499;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1661;QR=2684;RO=67;RPL=0;RPP=94.2121;RPPR=148.499;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=67;SRP=148.499;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:557:0:0:0,-4.21442,-50.4705 0/0:18:18,0:18:724:0:0:0,-5.41854,-65.486 0/1:9:6,3:6:243:3:93:-5.96462,0,-19.5387 0/0:22:22,0:22:881:0:0:0,-6.62266,-79.5971 1/1:19:0,19:0:0:19:767:-69.3504,-5.71957,0 0/1:27:7,20:7:279:20:801:-64.2773,0,-17.353 dDocent_Contig_12983 197 . T C 179.056 . AB=0.130719;ABP=184.236;AC=1;AF=0.1;AN=10;AO=20;CIGAR=1X;DP=358;DPB=358;DPRA=2.98537;EPP=46.4397;EPPR=734.797;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=725;QR=12754;RO=337;RPL=20;RPP=46.4397;RPPR=734.797;RPR=0;RUN=1;SAF=0;SAP=46.4397;SAR=20;SRF=0;SRP=734.797;SRR=337;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:47:47,0:47:1804:0:0:0,-14.1484,-162.609 0/0:142:141,0:141:5356:0:0:0,-42.4452,-481.769 0/0:14:14,0:14:540:0:0:0,-4.21442,-48.9444 0/1:153:133,20:133:4978:20:725:-19.5075,0,-401.99 ./.:.:.:.:.:.:.:. 0/0:2:2,0:2:76:0:0:0,-0.60206,-7.21467 dDocent_Contig_12984 50 . G A 1211.17 . AB=0.518072;ABP=3.24576;AC=4;AF=0.333333;AN=12;AO=43;CIGAR=1X;DP=128;DPB=128;DPRA=0.922222;EPP=96.3836;EPPR=187.585;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1688;QR=3374;RO=85;RPL=43;RPP=96.3836;RPPR=187.585;RPR=0;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=85;SRP=187.585;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:15:6,9:6:233:9:359:-28.1572,0,-16.822 0/1:16:3,13:3:120:13:504:-40.8877,0,-6.37083 0/1:23:18,5:18:720:5:190:-10.5394,0,-58.2037 0/1:29:13,16:13:498:16:635:-48.7546,0,-36.4302 0/0:20:20,0:20:806:0:0:0,-6.0206,-72.8571 0/0:25:25,0:25:997:0:0:0,-7.52575,-90.0293 dDocent_Contig_12985 77 . T G 129.299 . AB=0.4;ABP=4.31318;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=287;DPB=287;DPRA=1.2067;EPP=18.2106;EPPR=608.851;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.989247;PAO=0;PQA=0;PQR=0;PRO=0;QA=213;QR=6618;RO=279;RPL=7;RPP=18.2106;RPPR=608.851;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=279;SRP=608.851;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:71:71,0:71:1643:0:0:0,-21.3731,-148.093 0/0:93:91,1:91:2184:1:6:0,-27.1548,-196.184 0/0:46:46,0:46:1077:0:0:0,-13.8474,-97.1564 0/0:40:40,0:40:973:0:0:0,-12.0412,-87.8067 0/1:15:9,6:9:253:6:207:-14.4527,0,-18.5328 0/0:22:22,0:22:488:0:0:0,-6.62266,-44.1395 dDocent_Contig_12987 41 . T C 110.04 . AB=0.214286;ABP=22.8638;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=93;DPB=93;DPRA=0.861538;EPP=16.0391;EPPR=191.928;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=243;QR=3472;RO=87;RPL=0;RPP=16.0391;RPPR=191.928;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=87;SRP=191.928;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:5:5,0:5:198:0:0:0,-1.50515,-18.1976 0/0:8:8,0:8:310:0:0:0,-2.40824,-28.2593 0/0:26:26,0:26:1056:0:0:0,-7.82678,-95.3273 0/0:26:26,0:26:1039:0:0:0,-7.82678,-93.8003 0/1:13:9,4:9:366:4:164:-11.2365,0,-29.3916 0/1:15:13,2:13:503:2:79:-2.98179,0,-41.0924 dDocent_Contig_12988 22 . C T 1575.41 . AB=0.623377;ABP=13.1908;AC=6;AF=0.5;AN=12;AO=66;CIGAR=1X3M;DP=117;DPB=117;DPRA=0;EPP=121.454;EPPR=109.412;GTI=0;LEN=1;MEANALT=1.16667;MQM=43.0303;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.0909091;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2214;QR=1921;RO=49;RPL=0;RPP=146.327;RPPR=109.412;RPR=66;RUN=1;SAF=63;SAP=121.454;SAR=3;SRF=49;SRP=109.412;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:21:10,0,11:10:400:0,11:0,382:-26.4535,-29.4638,-62.4484,0,-33.35,-30.0386 0|0:24:22,0,2:22:857:0,2:0,56:0,-6.62266,-77.1754,-2.47602,-73.2903,-72.6882 0|1:9:1,0,8:1:39:0,8:0,224:-15.5357,-15.8368,-19.0582,0,-3.59553,-1.18729 0|1:23:11,0,12:11:429:0,12:0,397:-27.7977,-31.109,-66.4004,0,-35.647,-32.0346 0|1:24:5,2,17:5:196:2,17:81,575:-42.861,-37.6785,-53.2102,0,-9.42639,-10.9917 1|1:16:0,0,16:0:0:0,16:0,580:-51.2913,-51.2913,-51.2913,-4.81648,-4.81648,0 dDocent_Contig_12989 8 . G A 977.594 . AB=0.183432;ABP=150.118;AC=5;AF=0.416667;AN=12;AO=35;CIGAR=1M1X9M;DP=248;DPB=247.182;DPRA=0;EPP=79.0118;EPPR=376.504;GTI=0;LEN=1;MEANALT=2.33333;MQM=59.7429;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1342;QR=6650;RO=172;RPL=0;RPP=79.0118;RPPR=376.504;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=172;SRP=376.504;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:30:21,0,0,8,0:21:812:0,0,8,0:0,0,307,0:-18.9699,-25.2915,-91.9967,-25.2915,-91.9967,-91.9967,0,-66.7967,-66.7967,-64.3885,-25.2915,-91.9967,-91.9967,-66.7967,-91.9967 0|1:21:10,0,0,11,0:10:382:0,0,11,0:0,0,420,0:-31.83,-34.8403,-66.1801,-34.8403,-66.1801,-66.1801,0,-31.7215,-31.7215,-28.4101,-34.8403,-66.1801,-66.1801,-31.7215,-66.1801 0|0:79:69,0,0,4,5:69:2663:0,0,4,5:0,0,153,204:0,-20.7711,-239.449,-20.7711,-239.449,-239.449,-8.22457,-226.894,-226.894,-225.69,-3.92778,-222.616,-222.616,-210.061,-221.111 0|1:31:24,0,0,7,0:24:925:0,0,7,0:0,0,273,0:-15.6061,-22.8308,-98.7833,-22.8308,-98.7833,-98.7833,0,-76.3411,-76.3411,-74.2339,-22.8308,-98.7833,-98.7833,-76.3411,-98.7833 0|1:45:17,12,12,4,0:17:660:12,12,4,0:445,416,150,0:-31.3028,0,-50.6364,-2.62363,-20.4555,-53.2507,-24.1398,-41.9701,-44.5857,-77.1789,-36.4203,-54.2488,-56.8631,-78.383,-90.6616 0|1:42:31,6,3,1,0:31:1208:6,3,1,0:227,114,39,0:-9.27242,0,-97.4824,-9.25596,-89.94,-107.645,-15.3977,-96.0827,-105.342,-114.39,-18.6043,-99.2886,-108.548,-114.691,-117.897 dDocent_Contig_12990 112 . T A 271.035 . AB=0.231707;ABP=54.2782;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1X;DP=233;DPB=233;DPRA=2.2093;EPP=52.9542;EPPR=459.02;GTI=0;LEN=1;MEANALT=1;MQM=56.1304;MQMR=59.4238;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.869565;PAIREDR=0.966667;PAO=0;PQA=0;PQR=0;PRO=0;QA=759;QR=7102;RO=210;RPL=0;RPP=52.9542;RPPR=459.02;RPR=23;RUN=1;SAF=0;SAP=52.9542;SAR=23;SRF=0;SRP=459.02;SRR=210;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:49:36,13:36:1195:13:440:-23.8567,0,-92.3463 0/0:41:40,1:40:1346:1:35:0,-8.8436,-117.936 0/0:16:16,0:16:548:0:0:0,-4.81648,-49.6443 0/1:33:27,6:27:926:6:179:-6.46869,0,-73.6128 0/0:27:27,0:27:909:0:0:0,-8.12781,-82.1181 0/0:67:64,3:64:2178:3:105:0,-10.4453,-186.304 dDocent_Contig_12991 98 . N G 395.369 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=13;CIGAR=1X;DP=13;DPB=13;DPRA=0;EPP=31.2394;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=0.923077;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=419;QR=0;RO=0;RPL=13;RPP=31.2394;RPPR=0;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:86:-8.02497,-0.90309,0 1/1:7:0,7:0:0:7:237:-21.6614,-2.10721,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:26:-2.59983,-0.30103,0 dDocent_Contig_12992 82 . C T 86.0874 . AB=0.102041;ABP=70.4146;AC=2;AF=0.166667;AN=12;AO=5;CIGAR=9M1X1M;DP=139;DPB=132.455;DPRA=1.16667;EPP=13.8677;EPPR=274.444;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.52;PAO=0;PQA=0;PQR=0;PRO=0;QA=183;QR=4456;RO=125;RPL=1;RPP=6.91895;RPPR=24.2907;RPR=4;RUN=1;SAF=1;SAP=6.91895;SAR=4;SRF=80;SRP=24.2907;SRR=45;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:16:16,0,0:16:569:0,0:0,0:0,-4.81648,-51.5412,-4.81648,-51.5412,-51.5412 0|1:31:27,0,3:27:952:0,3:0,111:-0.953239,-9.08105,-86.5784,0,-77.4957,-76.5926 0|0:23:23,0,0:23:803:0,0:0,0:0,-6.92369,-72.5836,-6.92369,-72.5836,-72.5836 0|1:18:16,0,2:16:568:0,2:0,72:-1.4181,-6.23458,-52.506,0,-46.6307,-46.0287 0|0:24:22,2,0:22:798:2,0:68,0:0,-0.768311,-65.6858,-6.62266,-66.2879,-71.8005 0|0:27:21,6,0:21:766:6,0:199,0:-10.1068,0,-61.1355,-16.4284,-62.9416,-79.0312 dDocent_Contig_12993 18 . C T 74.0074 . AB=0.127273;ABP=69.3784;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=326;DPB=326;DPRA=0.963636;EPP=24.725;EPPR=689.196;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0;PAIREDR=0.477848;PAO=0;PQA=0;PQR=0;PRO=0;QA=401;QR=12579;RO=316;RPL=0;RPP=24.725;RPPR=689.196;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=316;SRP=689.196;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:43:43,0:43:1739:0:0:0,-12.9443,-156.725 0/0:81:81,0:81:3161:0:0:0,-24.3834,-284.559 0/0:35:35,0:35:1396:0:0:0,-10.536,-125.893 0/0:61:61,0:61:2437:0:0:0,-18.3628,-219.475 0/1:55:48,7:48:1903:7:279:-8.92362,0,-154.912 0/0:51:48,3:48:1943:3:122:0,-3.98004,-163.686 dDocent_Contig_12994 32 . T A 1192.85 . AB=0.237903;ABP=150.986;AC=4;AF=0.333333;AN=12;AO=61;CIGAR=1X;DP=391;DPB=391;DPRA=1.08197;EPP=135.47;EPPR=715.253;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.803279;PAIREDR=0.658537;PAO=0;PQA=0;PQR=0;PRO=0;QA=2300;QR=11586;RO=328;RPL=0;RPP=135.47;RPPR=715.253;RPR=61;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=328;SRP=715.253;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:61:61,0:61:2182:0:0:0,-18.3628,-196.627 0/1:103:87,15:87:3058:15:550:-18.7109,0,-244.315 0/1:48:41,6:41:1474:6:208:-4.49838,0,-118.384 0/0:82:80,2:80:2844:2:77:0,-17.3756,-248.864 0/1:50:29,21:29:1005:21:813:-58.4362,0,-75.6997 0/1:47:30,17:30:1023:17:652:-44.8612,0,-78.2215 dDocent_Contig_12995 20 . G A 1884.32 . AB=0.403509;ABP=16.8392;AC=6;AF=0.5;AN=12;AO=69;CIGAR=1X;DP=171;DPB=171;DPRA=0;EPP=152.842;EPPR=224.5;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.869565;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2767;QR=4058;RO=102;RPL=0;RPP=152.842;RPPR=224.5;RPR=69;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=102;SRP=224.5;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:19,14:19:745:14:560:-40.8061,0,-57.4356 0/1:43:32,11:32:1256:11:442:-27.1911,0,-100.361 0/1:9:2,7:2:82:7:272:-22.1303,0,-5.07041 0/1:52:35,17:35:1408:17:690:-46.7751,0,-111.317 0/1:9:3,6:3:121:6:238:-19.084,0,-8.57072 0/1:25:11,14:11:446:14:565:-43.6668,0,-32.9699 dDocent_Contig_12996 7 . A C 265.426 . AB=0.34375;ABP=9.79615;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=298;DPB=298;DPRA=0.865385;EPP=33.4109;EPPR=619.708;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.90493;PAO=0;PQA=0;PQR=0;PRO=0;QA=531;QR=10760;RO=284;RPL=0;RPP=33.4109;RPPR=619.708;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=284;SRP=619.708;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:77:77,0:77:2935:0:0:0,-23.1793,-264.326 0/0:58:55,3:55:2094:3:116:0,-6.64203,-177.876 0/0:41:41,0:41:1573:0:0:0,-12.3422,-141.841 0/0:42:42,0:42:1564:0:0:0,-12.6433,-141.032 0/1:32:21,11:21:803:11:415:-28.0654,0,-62.9609 0/0:48:48,0:48:1791:0:0:0,-14.4494,-161.44 dDocent_Contig_12997 57 . C G 904.322 . AB=0.166154;ABP=317.633;AC=5;AF=0.416667;AN=12;AO=55;CIGAR=1X;DP=379;DPB=379;DPRA=0;EPP=122.441;EPPR=706.567;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.981818;PAIREDR=0.969136;PAO=0;PQA=0;PQR=0;PRO=0;QA=2215;QR=12761;RO=324;RPL=55;RPP=122.441;RPPR=706.567;RPR=0;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=324;SRP=706.567;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:53,1:53:2079:1:41:0,-12.1611,-183.21 0/1:77:63,14:63:2516:14:560:-27.5602,0,-203.403 0/1:57:46,11:46:1795:11:446:-23.3373,0,-144.604 0/1:82:65,17:65:2514:17:680:-36.8464,0,-201.72 0/1:55:50,5:50:1983:5:204:-2.18738,0,-162.111 0/1:54:47,7:47:1874:7:284:-9.67817,0,-152.612 dDocent_Contig_12998 19 . T G 74.2217 . AB=0;ABP=0;AC=2;AF=0.2;AN=10;AO=2;CIGAR=1X3M1X;DP=125;DPB=125;DPRA=0.0650407;EPP=7.35324;EPPR=267.93;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=74;QR=4865;RO=122;RPL=0;RPP=7.35324;RPPR=267.93;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=122;SRP=267.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:18:18,0:18:711:0:0:0,-5.41854,-64.3196 0|0:31:31,0:31:1240:0:0:0,-9.33193,-111.876 0|0:32:32,0:32:1275:0:0:0,-9.63296,-115.025 0|0:42:41,0:41:1639:0:0:0,-12.3422,-147.551 1|1:2:0,2:0:0:2:74:-7.02402,-0.60206,0 .:.:.:.:.:.:.:. dDocent_Contig_12999 74 . C A 3473.77 . AB=0.162918;ABP=1802.18;AC=4;AF=0.5;AN=8;AO=297;CIGAR=1X;DP=1823;DPB=1823;DPRA=0;EPP=647.938;EPPR=3308;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9712;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999345;PAO=0;PQA=0;PQR=0;PRO=0;QA=10028;QR=51759;RO=1526;RPL=297;RPP=647.938;RPPR=3316.68;RPR=0;RUN=1;SAF=297;SAP=647.938;SAR=0;SRF=1525;SRP=3308;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:307:250,57:250:8540:57:1910:-79.7599,0,-673.998 0/1:715:621,94:621:21009:94:3187:-71.8292,0,-1675.24 0/1:499:425,74:425:14338:74:2480:-73.2425,0,-1140.09 0/1:302:230,72:230:7872:72:2451:-129.943,0,-617.659 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13001 17 . C A 960.162 . AB=0.390476;ABP=13.9504;AC=5;AF=0.416667;AN=12;AO=41;CIGAR=1X;DP=110;DPB=110;DPRA=4.2;EPP=92.0407;EPPR=152.842;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.414634;PAIREDR=0.681159;PAO=0;PQA=0;PQR=0;PRO=0;QA=1501;QR=2751;RO=69;RPL=0;RPP=92.0407;RPPR=152.842;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=69;SRP=152.842;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:13,10:13:523:10:361:-25.9104,0,-40.4923 0/1:18:6,12:6:244:12:442:-34.7069,0,-16.9201 0/0:5:5,0:5:196:0:0:0,-1.50515,-18.0128 0/1:18:11,7:11:425:7:254:-17.792,0,-33.178 0/1:23:18,5:18:724:5:185:-10.0863,0,-58.5611 0/1:23:16,7:16:639:7:259:-16.7424,0,-50.918 dDocent_Contig_13002 107 . N T 97.967 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=105;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:105:-9.79616,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13003 1 . N G 51866.6 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=1764;CIGAR=1X;DP=1770;DPB=1770;DPRA=0;EPP=3833.49;EPPR=0;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=57623;QR=0;RO=0;RPL=0;RPP=3833.49;RPPR=0;RPR=1764;RUN=1;SAF=0;SAP=3833.49;SAR=1764;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:286:0,285:0:0:285:9334:-840.042,-85.7936,0 1/1:347:0,345:0:0:345:11285:-1015.45,-103.855,0 1/1:187:0,187:0:0:187:6155:-554.103,-56.2926,0 1/1:300:0,299:0:0:299:9606:-864.526,-90.008,0 1/1:312:0,310:0:0:310:10158:-914.044,-93.3193,0 1/1:338:0,338:0:0:338:11085:-997.653,-101.748,0 dDocent_Contig_13004 98 . N A 59.8491 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=63;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:63:-5.98383,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13005 52 . C T 100.979 . AB=0.333333;ABP=6.62942;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=66;DPB=66;DPRA=0.885714;EPP=16.0391;EPPR=133.299;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=230;QR=2360;RO=60;RPL=6;RPP=16.0391;RPPR=133.299;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=60;SRP=133.299;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:537:0:0:0,-4.21442,-48.6592 0/0:8:8,0:8:306:0:0:0,-2.40824,-27.8926 0/0:13:13,0:13:524:0:0:0,-3.91339,-47.5058 0/0:16:15,1:15:598:1:40:0,-0.820801,-50.1636 0/1:6:3,3:3:116:3:119:-9.28883,0,-9.01122 0/1:9:7,2:7:279:2:71:-4.03016,0,-22.7717 dDocent_Contig_13006 20 . T A 2077.9 . AB=0.222749;ABP=284.767;AC=5;AF=0.416667;AN=12;AO=102;CIGAR=1X;DP=528;DPB=528;DPRA=0;EPP=224.5;EPPR=902.183;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.990196;PAIREDR=0.992958;PAO=0;PQA=0;PQR=0;PRO=0;QA=4133;QR=17097;RO=426;RPL=0;RPP=224.5;RPPR=928.058;RPR=102;RUN=1;SAF=102;SAP=224.5;SAR=0;SRF=423;SRP=902.183;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:62:44,18:44:1739:18:729:-47.2705,0,-138.061 0/1:85:67,18:67:2705:18:721:-39.6239,0,-217.967 0/1:49:40,9:40:1614:9:367:-18.6448,0,-130.734 0/1:101:68,33:68:2743:33:1342:-90.6295,0,-216.571 0/1:125:109,16:109:4352:16:646:-20.843,0,-353.99 0/0:106:98,8:98:3944:8:328:0,-2.01884,-325.035 dDocent_Contig_13007 109 . A C 521.526 . AB=0;ABP=0;AC=4;AF=0.333333;AN=12;AO=30;CIGAR=1X;DP=312;DPB=312;DPRA=0.583756;EPP=68.1545;EPPR=606.71;GTI=0;LEN=1;MEANALT=1;MQM=23.7333;MQMR=59.5922;NS=6;NUMALT=1;ODDS=8.67362e-19;PAIRED=0;PAIREDR=0.985816;PAO=0;PQA=0;PQR=0;PRO=0;QA=785;QR=9457;RO=282;RPL=0;RPP=68.1545;RPPR=615.366;RPR=30;RUN=1;SAF=0;SAP=68.1545;SAR=30;SRF=1;SRP=606.71;SRR=281;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1198:0:0:0,-10.536,-108.123 0/0:105:105,0:105:3535:0:0:0,-31.6081,-318.374 0/0:57:57,0:57:1866:0:0:0,-17.1587,-167.726 0/0:84:83,1:83:2824:1:5:0,-24.7866,-253.91 1/1:9:1,8:1:5:8:232:-15.5221,-2.20942,0 1/1:22:1,21:1:29:21:548:-35.8524,-3.723,0 dDocent_Contig_13008 37 . A T 45.2354 . AB=0.157895;ABP=22.325;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1M1I1M1X;DP=183;DPB=184.667;DPRA=0.691176;EPP=13.8677;EPPR=389.532;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.6;PAIREDR=0.460674;PAO=0;PQA=0;PQR=0;PRO=0;QA=205;QR=6981;RO=178;RPL=0;RPP=13.8677;RPPR=389.532;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=178;SRP=389.532;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:19:16,3:16:622:3:123:-5.74522,0,-50.5943 0|0:49:49,0:49:1923:0:0:0,-14.7505,-173.285 0|0:26:26,0:26:997:0:0:0,-7.82678,-90.0338 0|0:28:26,2:26:1029:2:82:0,-0.649162,-85.128 0|0:27:27,0:27:1067:0:0:0,-8.12781,-96.3236 0|0:34:34,0:34:1343:0:0:0,-10.235,-121.138 dDocent_Contig_13009 47 . G T 31.1004 . AB=0.148148;ABP=32.0437;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=163;DPB=163;DPRA=0.992647;EPP=11.6962;EPPR=348.274;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.641509;PAO=0;PQA=0;PQR=0;PRO=0;QA=138;QR=5252;RO=159;RPL=0;RPP=11.6962;RPPR=348.274;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=348.274;SRR=159;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:42:42,0:42:1436:0:0:0,-12.6433,-129.537 0/0:32:32,0:32:1056:0:0:0,-9.63296,-95.341 0/0:15:15,0:15:477:0:0:0,-4.51545,-43.2359 0/0:31:31,0:31:992:0:0:0,-9.33193,-89.5741 0/1:27:23,4:23:775:4:138:-4.63259,0,-61.9357 0/0:16:16,0:16:516:0:0:0,-4.81648,-46.7472 dDocent_Contig_13010 11 . A T 42.1343 . AB=0.116279;ABP=58.0041;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=229;DPB=229;DPRA=2.6625;EPP=29.068;EPPR=474.22;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.666667;PAIREDR=0.451613;PAO=0;PQA=0;PQR=0;PRO=0;QA=475;QR=8574;RO=217;RPL=0;RPP=29.068;RPPR=474.22;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=217;SRP=474.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:43:38,5:38:1506:5:200:-5.43525,0,-122.846 0/0:36:35,1:35:1392:1:34:0,-7.43817,-122.143 0/0:16:16,0:16:618:0:0:0,-4.81648,-55.946 0/0:52:50,2:50:1973:2:82:0,-7.87388,-169.995 0/0:26:25,1:25:990:1:40:0,-3.8311,-85.402 0/0:56:53,3:53:2095:3:119:0,-5.76228,-177.646 dDocent_Contig_13011 70 . T C 104.693 . AB=0.177778;ABP=43.5927;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=300;DPB=300;DPRA=1.19149;EPP=29.068;EPPR=628.394;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.583333;PAIREDR=0.538194;PAO=0;PQA=0;PQR=0;PRO=0;QA=431;QR=10745;RO=288;RPL=12;RPP=29.068;RPPR=628.394;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=288;SRP=628.394;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:44,0:44:1595:0:0:0,-13.2453,-143.834 0/1:45:37,8:37:1354:8:280:-11.9922,0,-108.612 0/0:34:34,0:34:1293:0:0:0,-10.235,-116.658 0/0:67:63,4:63:2380:4:151:0,-6.21123,-200.448 0/0:56:56,0:56:2107:0:0:0,-16.8577,-189.857 0/0:54:54,0:54:2016:0:0:0,-16.2556,-181.667 dDocent_Contig_13012 107 . N T 42.748 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=45;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:45:-4.27369,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13013 55 . G A 444.887 . AB=0.162304;ABP=192.201;AC=5;AF=0.416667;AN=12;AO=33;CIGAR=1X;DP=228;DPB=228;DPRA=0;EPP=74.6689;EPPR=426.447;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.575758;PAIREDR=0.753846;PAO=0;PQA=0;PQR=0;PRO=0;QA=1295;QR=7604;RO=195;RPL=33;RPP=74.6689;RPPR=426.447;RPR=0;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=195;SRP=426.447;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:27,7:27:1044:7:280:-15.3362,0,-84.0322 0/0:37:35,2:35:1316:2:80:0,-3.54632,-111.131 0/1:25:22,3:22:859:3:120:-3.66215,0,-70.0939 0/1:47:42,5:42:1655:5:199:-4.14032,0,-135.031 0/1:42:32,10:32:1270:10:383:-22.1752,0,-101.92 0/1:43:37,6:37:1460:6:233:-8.39455,0,-118.696 dDocent_Contig_13014 7 . A T 1196.77 . AB=0.16;ABP=53.2147;AC=5;AF=0.416667;AN=12;AO=43;CIGAR=1X;DP=185;DPB=185;DPRA=1.55556;EPP=96.3836;EPPR=311.359;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1655;QR=5456;RO=142;RPL=0;RPP=96.3836;RPPR=311.359;RPR=43;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=142;SRP=311.359;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:50:42,8:42:1611:8:309:-13.1215,0,-130.205 0/0:11:11,0:11:422:0:0:0,-3.31133,-38.3329 0/0:34:34,0:34:1313:0:0:0,-10.235,-118.458 0/0:59:55,4:55:2110:4:156:0,-3.34348,-175.714 1/1:23:0,23:0:0:23:887:-80.1489,-6.92369,0 1/1:8:0,8:0:0:8:303:-27.6286,-2.40824,0 dDocent_Contig_13016 54 . C A 218.336 . AB=0.140741;ABP=154.354;AC=3;AF=0.25;AN=12;AO=22;CIGAR=1X;DP=212;DPB=212;DPRA=1.64348;EPP=50.7827;EPPR=354.869;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=59.9894;NS=6;NUMALT=1;ODDS=0;PAIRED=0.636364;PAIREDR=0.486772;PAO=0;PQA=0;PQR=0;PRO=0;QA=836;QR=7452;RO=189;RPL=22;RPP=50.7827;RPPR=413.419;RPR=0;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=182;SRP=354.869;SRR=7;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:23,2:23:913:2:56:0,-2.20837,-77.1592 0/0:23:23,0:23:864:0:0:0,-6.92369,-78.0522 0/0:29:27,1:27:1063:1:40:0,-4.76294,-92.0323 0/1:46:39,7:39:1550:7:275:-11.2701,0,-125.892 0/1:26:22,4:22:872:4:148:-5.85465,0,-70.9644 0/1:63:55,8:55:2190:8:317:-9.9307,0,-178.314 dDocent_Contig_13017 8 . G A 6344.78 . AB=0.458824;ABP=10.521;AC=6;AF=0.5;AN=12;AO=234;CIGAR=1X;DP=510;DPB=510;DPRA=0;EPP=511.135;EPPR=602.337;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.944444;PAIREDR=0.949275;PAO=0;PQA=0;PQR=0;PRO=0;QA=8862;QR=10529;RO=276;RPL=0;RPP=511.135;RPPR=602.337;RPR=234;RUN=1;SAF=234;SAP=511.135;SAR=0;SRF=276;SRP=602.337;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:86:44,42:44:1674:42:1613:-119.546,0,-125.034 0/1:106:48,58:48:1807:58:2177:-164.241,0,-130.965 0/1:88:54,34:54:2048:34:1305:-91.248,0,-158.065 0/1:102:66,36:66:2548:36:1373:-93.149,0,-198.808 0/1:71:26,45:26:996:45:1673:-129.454,0,-68.5789 0/1:57:38,19:38:1456:19:721:-48.0615,0,-114.155 dDocent_Contig_13020 107 . N T 64.2442 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=70;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.42333,-0.60206,0 dDocent_Contig_13021 7 . A G 195.541 . AB=0.182927;ABP=74.6159;AC=1;AF=0.0833333;AN=12;AO=21;CIGAR=1X;DP=339;DPB=339;DPRA=1.95652;EPP=48.6112;EPPR=693.539;GTI=0;LEN=1;MEANALT=1;MQM=58.7619;MQMR=49.3868;NS=6;NUMALT=1;ODDS=0;PAIRED=0.047619;PAIREDR=0.330189;PAO=0;PQA=0;PQR=0;PRO=0;QA=660;QR=12151;RO=318;RPL=0;RPP=48.6112;RPPR=693.539;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=318;SRP=693.539;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:75:73,2:73:2786:2:61:0,-16.7835,-237.649 0/0:57:54,3:54:2057:3:70:0,-10.6274,-156.637 0/0:47:47,0:47:1811:0:0:0,-14.1484,-144.361 0/1:82:67,15:67:2564:15:505:-21.077,0,-197.439 0/0:22:22,0:22:827:0:0:0,-6.62266,-66.728 0/0:56:55,1:55:2106:1:24:0,-14.4989,-154.092 dDocent_Contig_13023 28 . C T 386.926 . AB=0.151515;ABP=37.8197;AC=6;AF=0.5;AN=12;AO=14;CIGAR=1X;DP=55;DPB=55;DPRA=1.61538;EPP=33.4109;EPPR=92.0407;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.926829;PAO=0;PQA=0;PQR=0;PRO=0;QA=559;QR=1612;RO=41;RPL=0;RPP=33.4109;RPPR=92.0407;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=41;SRP=92.0407;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:11:9,2:9:344:2:78:-4.09145,0,-28.0035 0/0:5:5,0:5:189:0:0:0,-1.50515,-17.3734 0/1:22:19,3:19:758:3:122:-4.74983,0,-61.9201 1/1:4:0,4:0:0:4:161:-14.8755,-1.20412,0 1/1:5:0,5:0:0:5:198:-18.1969,-1.50515,0 0/0:8:8,0:8:321:0:0:0,-2.40824,-29.2579 dDocent_Contig_13024 9 . T G 537.304 . AB=0.221374;ABP=91.3445;AC=4;AF=0.333333;AN=12;AO=32;CIGAR=1X1M1X;DP=265;DPB=265;DPRA=0.376087;EPP=72.4974;EPPR=502.449;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=59.9957;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.978261;PAO=0;PQA=0;PQR=0;PRO=0;QA=1206;QR=8756;RO=230;RPL=0;RPP=72.4974;RPPR=502.449;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=230;SRP=502.449;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:16:13,3,0:13:497:3,0:112,0:-5.62926,0,-40.2607,-9.54264,-41.1638,-50.3317 0|1:39:26,12,0:26:974:12,0:446,0:-28.766,0,-76.2517,-36.5928,-79.864,-116.363 0|1:24:13,9,2:13:501:9,2:346,67:-24.5326,0,-38.4733,-23.0294,-35.7637,-63.567 0|0:42:39,3,0:39:1494:3,0:115,0:0,-1.91823,-124.007,-11.7402,-124.911,-134.349 0|1:52:47,5,0:47:1799:5,0:187,0:-1.53919,0,-146.506,-15.6876,-148.011,-163.324 0|0:92:92,0,0:92:3491:0,0:0,0:0,-27.6948,-314.31,-27.6948,-314.31,-314.31 dDocent_Contig_13025 39 . G C 1382.08 . AB=0.200573;ABP=274.793;AC=4;AF=0.333333;AN=12;AO=70;CIGAR=1X;DP=569;DPB=569;DPRA=0.793182;EPP=155.013;EPPR=1086.58;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.485714;PAIREDR=0.599198;PAO=0;PQA=0;PQR=0;PRO=0;QA=2769;QR=19698;RO=499;RPL=0;RPP=155.013;RPPR=1086.58;RPR=70;RUN=1;SAF=70;SAP=155.013;SAR=0;SRF=499;SRP=1086.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:82:61,21:61:2412:21:828:-50.1446,0,-192.559 0/1:91:79,12:79:3107:12:476:-15.7927,0,-252.327 0/1:67:43,24:43:1708:24:968:-67.2485,0,-133.779 0/1:109:96,13:96:3763:13:497:-12.2445,0,-305.888 0/0:75:75,0:75:2954:0:0:0,-22.5772,-265.959 0/0:145:145,0:145:5754:0:0:0,-43.6493,-517.691 dDocent_Contig_13026 18 . A C 759.606 . AB=0.39726;ABP=9.70319;AC=4;AF=0.4;AN=10;AO=29;CIGAR=1X;DP=75;DPB=75;DPRA=9.125;EPP=65.983;EPPR=102.898;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1153;QR=1806;RO=46;RPL=0;RPP=65.983;RPPR=102.898;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=46;SRP=102.898;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:10:8,2:8:306:2:79:-4.48694,0,-24.8838 0/1:23:11,12:11:445:12:476:-36.2651,0,-33.4824 0/1:17:8,9:8:317:9:365:-28.0965,0,-23.7768 0/1:23:17,6:17:659:6:233:-14.4126,0,-52.7175 ./.:.:.:.:.:.:.:. 0/0:2:2,0:2:79:0:0:0,-0.60206,-7.49763 dDocent_Contig_13027 48 . G T 2011.01 . AB=0.450617;ABP=6.44176;AC=4;AF=0.333333;AN=12;AO=73;CIGAR=1X;DP=168;DPB=168;DPRA=13.5;EPP=161.528;EPPR=209.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.978947;PAO=0;PQA=0;PQR=0;PRO=0;QA=2842;QR=3659;RO=95;RPL=0;RPP=161.528;RPPR=209.3;RPR=73;RUN=1;SAF=73;SAP=161.528;SAR=0;SRF=95;SRP=209.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:12,30:12:474:30:1185:-94.2923,0,-30.3689 0/1:16:12,4:12:442:4:161:-10.0588,0,-35.2995 0/1:59:41,18:41:1596:18:681:-43.8477,0,-126.135 0/1:45:24,21:24:913:21:815:-60.1238,0,-68.9319 0/0:4:4,0:4:154:0:0:0,-1.20412,-14.2331 0/0:2:2,0:2:80:0:0:0,-0.60206,-7.59179 dDocent_Contig_13028 53 . G A 430.744 . AB=0.185185;ABP=26.2531;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X3M1X3M1X;DP=85;DPB=85;DPRA=1.6875;EPP=13.8677;EPPR=122.589;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0.813559;PAO=0;PQA=0;PQR=0;PRO=0;QA=176;QR=2250;RO=59;RPL=5;RPP=13.8677;RPPR=131.127;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=58;SRP=122.589;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:8:8,0,0,0:8:303:0,0,0:0,0,0:0,-2.40824,-27.6255,-2.40824,-27.6255,-27.6255,-2.40824,-27.6255,-27.6255,-27.6255 0|1:15:10,4,1,0:10:392:4,1,0:140,41,0:-8.33026,0,-31.0164,-7.94454,-28.8348,-39.9101,-11.3406,-32.2205,-40.2111,-43.5972 0|0:12:5,1,5,0:5:189:1,5,0:36,198,0:-14.803,-13.376,-28.5574,0,-12.5551,-13.9843,-16.3082,-28.8584,-15.4895,-31.7935 0|0:18:11,0,6,0:11:430:0,6,0:0,242,0:-16.64,-19.9513,-55.2972,0,-35.3448,-33.5386,-19.9513,-55.2972,-35.3448,-55.2972 0|0:23:19,0,0,3:19:704:0,0,3:0,0,118:-4.22911,-9.94868,-67.5795,-9.94868,-67.5795,-67.5795,0,-57.8681,-57.8681,-56.965 0|0:9:6,0,3,0:6:232:0,3,0:0,118,0:-8.29345,-10.0996,-29.1511,0,-19.4422,-18.5391,-10.0996,-29.1511,-19.4422,-29.1511 dDocent_Contig_13029 41 . G A 2121.83 . AB=0.284431;ABP=137.824;AC=3;AF=0.25;AN=12;AO=104;CIGAR=1X;DP=645;DPB=645;DPRA=0.89322;EPP=8.35546;EPPR=33.3908;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9205;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.663462;PAIREDR=0.724584;PAO=0;PQA=0;PQR=0;PRO=0;QA=3845;QR=20131;RO=541;RPL=0;RPP=228.843;RPPR=1160.47;RPR=104;RUN=1;SAF=44;SAP=8.35546;SAR=60;SRF=229;SRP=30.6615;SRR=312;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:87:81,6:81:3028:6:233:0,-4.8513,-251.35 0/1:143:107,36:107:3978:36:1345:-78.2836,0,-315.082 0/1:74:44,30:44:1637:30:1095:-76.5693,0,-125.314 0/1:117:88,29:88:3279:29:1083:-62.5516,0,-259.228 0/0:106:103,3:103:3808:3:89:0,-23.6054,-334.541 0/0:118:118,0:118:4401:0:0:0,-35.5215,-396.148 dDocent_Contig_13030 45 . A G 314.034 . AB=0.262295;ABP=32.9481;AC=3;AF=0.25;AN=12;AO=16;CIGAR=1X3M2X;DP=91;DPB=91;DPRA=2.03333;EPP=37.7539;EPPR=165.871;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.25;PAIREDR=0.706667;PAO=0;PQA=0;PQR=0;PRO=0;QA=599;QR=2806;RO=75;RPL=0;RPP=37.7539;RPPR=165.871;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=75;SRP=165.871;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:11:7,4:7:219:4:145:-10.0917,0,-16.7006 0|1:29:23,6:23:876:6:223:-11.6985,0,-70.4282 0|0:4:4,0:4:148:0:0:0,-1.20412,-13.6816 0|1:21:15,6:15:585:6:231:-14.835,0,-46.6713 0|0:22:22,0:22:827:0:0:0,-6.62266,-74.7447 0|0:4:4,0:4:151:0:0:0,-1.20412,-13.9578 dDocent_Contig_13033 120 . A G 932.27 . AB=0.284916;ABP=74.9358;AC=2;AF=0.166667;AN=12;AO=51;CIGAR=1X;DP=400;DPB=400;DPRA=1.61991;EPP=113.755;EPPR=758.683;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994253;PAO=0;PQA=0;PQR=0;PRO=0;QA=1661;QR=10794;RO=348;RPL=0;RPP=113.755;RPPR=758.683;RPR=51;RUN=1;SAF=0;SAP=113.755;SAR=51;SRF=0;SRP=758.683;SRR=348;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:98:98,0:98:3064:0:0:0,-29.5009,-276.007 0/1:96:82,13:82:2545:13:447:-11.8902,0,-200.651 0/0:72:72,0:72:2246:0:0:0,-21.6742,-202.4 0/1:83:45,38:45:1361:38:1214:-84.5586,0,-97.779 0/0:18:18,0:18:568:0:0:0,-5.41854,-51.4236 0/0:33:33,0:33:1010:0:0:0,-9.93399,-91.1852 dDocent_Contig_13034 7 . A G 42.8003 . AB=0.210526;ABP=16.8392;AC=2;AF=0.166667;AN=12;AO=4;CIGAR=1X;DP=90;DPB=90;DPRA=0.535211;EPP=11.6962;EPPR=187.585;GTI=0;LEN=1;MEANALT=1.5;MQM=49.5;MQMR=52.3294;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.541176;PAO=0;PQA=0;PQR=0;PRO=0;QA=139;QR=3273;RO=85;RPL=0;RPP=11.6962;RPPR=187.585;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=85;SRP=187.585;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1581:0:0:0,-12.3422,-127.627 0/0:17:17,0:17:651:0:0:0,-5.11751,-58.9255 0/1:16:13,3:13:503:3:102:-4.62915,0,-40.8022 0/0:12:12,0:12:460:0:0:0,-3.61236,-41.7509 0/0:1:1,0:1:39:0:0:0,-0.30103,-3.89656 0/1:3:1,1:1:39:1:37:-2.85588,0,-3.04468 dDocent_Contig_13035 20 . A C 75.4721 . AB=0.15;ABP=45.5712;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=169;DPB=169;DPRA=1.125;EPP=22.5536;EPPR=350.446;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.83125;PAO=0;PQA=0;PQR=0;PRO=0;QA=363;QR=6382;RO=160;RPL=0;RPP=22.5536;RPPR=350.446;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=160;SRP=350.446;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:809:0:0:0,-6.0206,-73.1256 0/0:46:45,1:45:1797:1:41:0,-9.75281,-157.85 0/1:20:18,2:18:723:2:81:-1.66513,0,-59.3734 0/1:20:16,4:16:640:4:163:-9.03783,0,-51.9138 0/0:31:29,2:29:1152:2:78:0,-1.92915,-96.5591 0/0:32:32,0:32:1261:0:0:0,-9.63296,-113.749 dDocent_Contig_13037 56 . G T 91.1869 . AB=0.157895;ABP=41.6397;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X3M1X1M1X3M1X;DP=189;DPB=189;DPRA=1.25828;EPP=16.0391;EPPR=389.532;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.166667;PAIREDR=0.691011;PAO=0;PQA=0;PQR=0;PRO=0;QA=239;QR=6602;RO=178;RPL=6;RPP=16.0391;RPPR=389.532;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=178;SRP=389.532;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:27:26,0,0:26:968:0,0:0,0:0,-7.82678,-87.1245,-7.82678,-87.1245,-87.1245 0|0:30:30,0,0:30:1092:0,0:0,0:0,-9.0309,-98.5867,-9.0309,-98.5867,-98.5867 0|1:38:30,6,2:30:1113:6,2:239,82:-10.6415,0,-89.2256,-12.9014,-84.2612,-103.345 0|0:42:41,0,0:41:1527:0,0:0,0:0,-12.3422,-137.622,-12.3422,-137.622,-137.622 0|0:35:35,0,0:35:1310:0,0:0,0:0,-10.536,-118.195,-10.536,-118.195,-118.195 0|0:17:16,0,1:16:592:0,1:0,39:0,-4.81648,-53.2257,-1.22095,-50.0186,-49.7176 dDocent_Contig_13038 8 . G A 1793.83 . AB=0.172673;ABP=622.812;AC=6;AF=0.5;AN=12;AO=115;CIGAR=1X;DP=666;DPB=666;DPRA=0;EPP=211.188;EPPR=1197.32;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=59.9891;NS=6;NUMALT=1;ODDS=0;PAIRED=0.913043;PAIREDR=0.967273;PAO=0;PQA=0;PQR=0;PRO=0;QA=4316;QR=20820;RO=550;RPL=0;RPP=252.73;RPPR=1197.32;RPR=115;RUN=1;SAF=110;SAP=211.188;SAR=5;SRF=550;SRP=1197.32;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:102:75,27:75:2849:27:1012:-60.6813,0,-225.886 0/1:139:111,28:111:4216:28:1041:-52.1552,0,-337.68 0/1:61:51,10:51:1953:10:370:-15.285,0,-157.646 0/1:126:104,22:104:3928:22:834:-37.4536,0,-315.697 0/1:116:99,17:99:3741:17:640:-23.0134,0,-301.885 0/1:122:110,11:110:4133:11:419:-1.35763,0,-335.365 dDocent_Contig_13039 64 . T G 156.274 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=4;CIGAR=1X;DP=163;DPB=163;DPRA=0.125786;EPP=11.6962;EPPR=348.274;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.987421;PAO=0;PQA=0;PQR=0;PRO=0;QA=164;QR=5966;RO=159;RPL=4;RPP=11.6962;RPPR=348.274;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=159;SRP=348.274;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1320:0:0:0,-10.536,-119.078 0/0:48:48,0:48:1798:0:0:0,-14.4494,-162.067 0/0:41:41,0:41:1527:0:0:0,-12.3422,-137.695 0/0:34:34,0:34:1282:0:0:0,-10.235,-115.669 1/1:4:0,4:0:0:4:164:-15.1499,-1.20412,0 0/0:1:1,0:1:39:0:0:0,-0.30103,-3.89656 dDocent_Contig_13040 35 . G C 51.2552 . AB=0.1875;ABP=16.582;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=97;DPB=97;DPRA=0.987654;EPP=9.52472;EPPR=207.129;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=3753;RO=94;RPL=0;RPP=9.52472;RPPR=207.129;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=94;SRP=207.129;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:648:0:0:0,-4.81648,-58.6526 0/0:22:22,0:22:879:0:0:0,-6.62266,-79.42 0/0:3:3,0:3:123:0:0:0,-0.90309,-11.4648 0/1:16:13,3:13:519:3:123:-6.64831,0,-42.2386 0/0:22:22,0:22:855:0:0:0,-6.62266,-77.2542 0/0:18:18,0:18:729:0:0:0,-5.41854,-65.9355 dDocent_Contig_13041 107 . N G 126.829 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=6;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=129;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:56:-5.22613,-0.90309,0 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 1/1:3:0,2:0:0:2:41:-3.77898,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13042 12 . A T 3220.12 . AB=0.574468;ABP=12.0658;AC=6;AF=0.5;AN=12;AO=108;CIGAR=1X;DP=188;DPB=188;DPRA=0;EPP=237.529;EPPR=176.728;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.62963;PAIREDR=0.8;PAO=0;PQA=0;PQR=0;PRO=0;QA=4310;QR=3143;RO=80;RPL=0;RPP=237.529;RPPR=176.728;RPR=108;RUN=1;SAF=108;SAP=237.529;SAR=0;SRF=80;SRP=176.728;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:18:5,13:5:201:13:516:-41.3601,0,-13.052 0/1:35:20,15:20:805:15:599:-43.7111,0,-62.2319 0/1:14:3,11:3:118:11:439:-35.6459,0,-6.78716 0/1:41:11,30:11:442:30:1218:-97.5484,0,-27.7931 0/1:35:20,15:20:736:15:577:-41.725,0,-56.0021 0/1:45:21,24:21:841:24:961:-73.2431,0,-62.4584 dDocent_Contig_13043 130 . C G 2444.5 . AB=0.413284;ABP=20.7106;AC=5;AF=0.416667;AN=12;AO=112;CIGAR=1X;DP=276;DPB=276;DPRA=10.84;EPP=246.215;EPPR=354.789;GTI=0;LEN=1;MEANALT=1.4;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3709;QR=5237;RO=162;RPL=0;RPP=246.215;RPPR=354.789;RPR=112;RUN=1;SAF=0;SAP=246.215;SAR=112;SRF=0;SRP=354.789;SRR=162;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:16,25:16:525:25:791:-59.1406,0,-35.2188 0/1:53:33,20:33:1067:20:636:-41.584,0,-80.3681 0/1:30:22,7:22:757:7:238:-12.6739,0,-59.3702 0/1:83:62,21:62:1966:21:706:-38.8683,0,-152.215 0/0:5:5,0:5:169:0:0:0,-1.50515,-15.5426 0/1:64:24,39:24:753:39:1338:-101.405,0,-48.7481 dDocent_Contig_13045 107 . N T 216.111 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=7;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=18.2106;EPPR=0;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=216;QR=0;RO=0;RPL=0;RPP=18.2106;RPPR=0;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 1/1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 1/1:4:0,3:0:0:3:95:-8.73304,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 dDocent_Contig_13047 9 . T C 3039.61 . AB=0.534314;ABP=5.09662;AC=6;AF=0.5;AN=12;AO=109;CIGAR=1X;DP=204;DPB=204;DPRA=0;EPP=239.701;EPPR=207.129;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.623853;PAIREDR=0.43617;PAO=0;PQA=0;PQR=0;PRO=0;QA=4160;QR=3294;RO=94;RPL=0;RPP=239.701;RPPR=207.129;RPR=109;RUN=1;SAF=109;SAP=239.701;SAR=0;SRF=94;SRP=207.129;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:14,14:14:500:14:535:-40.0656,0,-36.904 0/1:54:30,23:30:1049:23:879:-63.3632,0,-78.6541 0/1:13:8,5:8:280:5:194:-13.9195,0,-21.6254 0/1:59:29,30:29:1009:30:1138:-84.9606,0,-73.3498 0/1:20:8,12:8:285:12:464:-36.0909,0,-19.9729 0/1:30:5,25:5:171:25:950:-76.7835,0,-6.69369 dDocent_Contig_13049 125 . T A 36.8384 . AB=0.6;ABP=3.44459;AC=3;AF=0.25;AN=12;AO=37;CIGAR=1X1M1X;DP=136;DPB=136;DPRA=0;EPP=83.3548;EPPR=217.986;GTI=0;LEN=1;MEANALT=1;MQM=5.89189;MQMR=56.4545;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1244;QR=3315;RO=99;RPL=0;RPP=83.3548;RPPR=217.986;RPR=37;RUN=1;SAF=0;SAP=83.3548;SAR=37;SRF=0;SRP=217.986;SRR=99;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:24:21,3:21:706:3:105:0,-5.54587,-60.5049 0|0:27:20,7:20:668:7:222:0,-4.38854,-55.7724 0|0:19:11,8:11:362:8:271:0,-1.34353,-27.1338 0|0:55:45,10:45:1510:10:335:0,-11.1934,-129.844 0|1:5:2,3:2:69:3:105:-0.0804758,0,-5.04751 1|1:6:0,6:0:0:6:206:-3.20572,-1.80618,0 dDocent_Contig_13050 43 . A G 108.538 . AB=0.157895;ABP=60.9543;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=253;DPB=253;DPRA=1.38806;EPP=31.2394;EPPR=524.164;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.983333;PAO=0;PQA=0;PQR=0;PRO=0;QA=502;QR=9470;RO=240;RPL=0;RPP=31.2394;RPPR=524.164;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=240;SRP=524.164;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:27:23,4:23:884:4:161:-6.74709,0,-71.741 0/1:30:25,5:25:993:5:178:-7.32859,0,-80.6385 0/0:90:87,3:87:3448:3:123:0,-15.6279,-298.904 0/0:32:32,0:32:1279:0:0:0,-9.63296,-115.379 0/0:39:38,1:38:1489:1:40:0,-7.74449,-130.265 0/0:35:35,0:35:1377:0:0:0,-10.536,-124.19 dDocent_Contig_13051 126 . G A 648.058 . AB=0.2875;ABP=34.3881;AC=5;AF=0.5;AN=10;AO=31;CIGAR=1X;DP=101;DPB=101;DPRA=1.69231;EPP=70.3259;EPPR=155.013;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0.83871;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1032;QR=2356;RO=70;RPL=0;RPP=70.3259;RPPR=155.013;RPR=31;RUN=1;SAF=0;SAP=70.3259;SAR=31;SRF=0;SRP=155.013;SRR=70;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:8:0,8:0:0:8:267:-24.3562,-2.40824,0 0/1:12:7,5:7:243:5:173:-12.2979,0,-18.5965 0/1:24:13,11:13:450:11:354:-24.9454,0,-33.6065 0/1:44:37,7:37:1237:7:238:-8.50741,0,-98.3786 ./.:.:.:.:.:.:.:. 0/0:13:13,0:13:426:0:0:0,-3.91339,-38.6551 dDocent_Contig_13052 22 . C G 99.0503 . AB=0.123457;ABP=102.764;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=215;DPB=215;DPRA=3.02239;EPP=24.725;EPPR=448.162;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.936585;PAO=0;PQA=0;PQR=0;PRO=0;QA=394;QR=8148;RO=205;RPL=0;RPP=24.725;RPPR=448.162;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=205;SRP=448.162;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:909:0:0:0,-6.92369,-82.1163 0/0:19:19,0:19:762:0:0:0,-5.71957,-68.9023 0/0:32:32,0:32:1254:0:0:0,-9.63296,-113.125 0/0:8:8,0:8:323:0:0:0,-2.40824,-29.4384 0/0:52:52,0:52:2072:0:0:0,-15.6536,-186.654 0/1:81:71,10:71:2828:10:394:-11.4279,0,-230.233 dDocent_Contig_13053 31 . A T 37.0239 . AB=0.133333;ABP=38.0434;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=317;DPB=317;DPRA=0.577236;EPP=18.2106;EPPR=676.167;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.714286;PAIREDR=0.725806;PAO=0;PQA=0;PQR=0;PRO=0;QA=271;QR=12065;RO=310;RPL=0;RPP=18.2106;RPPR=676.167;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=310;SRP=676.167;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:26,4:26:1003:4:151:-4.9241,0,-81.5392 0/0:78:78,0:78:3022:0:0:0,-23.4803,-272.112 0/0:41:38,3:38:1494:3:120:0,-1.15433,-123.532 0/0:56:56,0:56:2200:0:0:0,-16.8577,-198.194 0/0:32:32,0:32:1230:0:0:0,-9.63296,-110.984 0/0:80:80,0:80:3116:0:0:0,-24.0824,-280.553 dDocent_Contig_13054 14 . C T 66.7038 . AB=0.113208;ABP=71.8828;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=2M1X2M;DP=270;DPB=279;DPRA=1.44545;EPP=16.0391;EPPR=528.507;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=51.405;NS=6;NUMALT=3;ODDS=0;PAIRED=0.333333;PAIREDR=0.690083;PAO=0;PQA=0;PQR=0;PRO=0;QA=246;QR=9480;RO=242;RPL=0;RPP=16.0391;RPPR=528.507;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=242;SRP=528.507;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:29:29,0,0,0:29:1125:0,0,0:0,0,0:0,-8.72987,-93.2774,-8.72987,-93.2774,-93.2774,-8.72987,-93.2774,-93.2774,-93.2774 0|0:48:47,1,0,0:47:1854:1,0,0:41,0,0:0,-10.3664,-150.099,-14.1484,-150.4,-153.774,-14.1484,-150.4,-153.774,-153.774 0|0:33:31,1,0,0:31:1222:1,0,0:40,0,0:0,-6.05013,-101.256,-9.33193,-101.557,-104.845,-9.33193,-101.557,-104.845,-104.845 0|0:42:36,6,0,0:36:1376:6,0,0:154,0,0:-0.642772,0,-85.4114,-11.4799,-87.2176,-98.4473,-11.4799,-87.2176,-98.4473,-98.4473 0|0:65:53,6,0,6:53:2083:6,0,6:197,0,235:-3.40313,-3.77327,-161.683,-19.3577,-163.49,-179.104,0,-144.164,-159.778,-157.972 0|1:53:46,1,6,0:46:1820:1,6,0:38,246,0:-6.48309,-17.2235,-143.771,0,-123.76,-125.066,-20.3305,-144.072,-126.872,-147.184 dDocent_Contig_13055 10 . A T 218.041 . AB=0.178082;ABP=68.7196;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=256;DPB=256;DPRA=0.696262;EPP=39.9253;EPPR=521.992;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.117647;PAIREDR=0.635983;PAO=0;PQA=0;PQR=0;PRO=0;QA=671;QR=9197;RO=239;RPL=0;RPP=39.9253;RPPR=521.992;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=239;SRP=521.992;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:23,5:23:876:5:195:-9.49472,0,-70.7301 0/1:45:37,8:37:1446:8:319:-15.5313,0,-116.861 0/0:32:30,2:30:1153:2:78:0,-2.22949,-96.6618 0/0:44:42,2:42:1632:2:79:0,-5.74769,-139.64 0/0:38:38,0:38:1449:0:0:0,-11.4391,-130.682 0/0:69:69,0:69:2641:0:0:0,-20.7711,-237.881 dDocent_Contig_13056 87 . G A 357.601 . AB=0.221154;ABP=73.2491;AC=3;AF=0.25;AN=12;AO=23;CIGAR=1X;DP=151;DPB=151;DPRA=2.21277;EPP=52.9542;EPPR=280.959;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.956522;PAIREDR=0.960938;PAO=0;PQA=0;PQR=0;PRO=0;QA=792;QR=4388;RO=128;RPL=23;RPP=52.9542;RPPR=280.959;RPR=0;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=128;SRP=280.959;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:20,12:20:674:12:411:-27.6861,0,-51.3423 0/1:34:28,6:28:965:6:208:-8.82457,0,-76.9272 0/0:19:19,0:19:648:0:0:0,-5.71957,-58.6406 0/1:38:33,5:33:1143:5:173:-4.47102,0,-91.7389 0/0:6:6,0:6:201:0:0:0,-1.80618,-18.4192 0/0:22:22,0:22:757:0:0:0,-6.62266,-68.4493 dDocent_Contig_13057 14 . T G 41.3324 . AB=0.113208;ABP=71.8828;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=232;DPB=232;DPRA=1.48045;EPP=16.0391;EPPR=493.763;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.743363;PAO=0;PQA=0;PQR=0;PRO=0;QA=236;QR=9084;RO=226;RPL=0;RPP=16.0391;RPPR=493.763;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=226;SRP=493.763;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:848:0:0:0,-6.32163,-76.6317 0/0:32:32,0:32:1278:0:0:0,-9.63296,-115.286 0/0:35:35,0:35:1404:0:0:0,-10.536,-126.611 0/0:48:48,0:48:1930:0:0:0,-14.4494,-173.894 0/1:53:47,6:47:1900:6:236:-5.65608,0,-155.244 0/0:43:43,0:43:1724:0:0:0,-12.9443,-155.376 dDocent_Contig_13058 10 . A C 45.2389 . AB=0.102041;ABP=137.819;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=366;DPB=366;DPRA=1.21053;EPP=26.8965;EPPR=773.883;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.949296;PAO=0;PQA=0;PQR=0;PRO=0;QA=431;QR=13639;RO=355;RPL=0;RPP=26.8965;RPPR=773.883;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=355;SRP=773.883;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:52:52,0:52:2017:0:0:0,-15.6536,-181.753 0/1:98:88,10:88:3385:10:391:-6.04676,0,-275.257 0/0:40:39,1:39:1471:1:40:0,-8.04552,-128.662 0/0:47:47,0:47:1786:0:0:0,-14.1484,-160.98 0/0:82:82,0:82:3154:0:0:0,-24.6845,-283.987 0/0:47:47,0:47:1826:0:0:0,-14.1484,-164.58 dDocent_Contig_13059 113 . T C 51.8144 . AB=0.144928;ABP=78.5712;AC=3;AF=0.25;AN=12;AO=12;CIGAR=1X3M1X;DP=124;DPB=124;DPRA=1.71429;EPP=29.068;EPPR=244.044;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.81982;PAO=0;PQA=0;PQR=0;PRO=0;QA=401;QR=3698;RO=111;RPL=0;RPP=29.068;RPPR=244.044;RPR=12;RUN=1;SAF=0;SAP=29.068;SAR=12;SRF=0;SRP=244.044;SRR=111;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:12:12,0:12:375:0:0:0,-3.61236,-34.0535 0|1:24:21,3:21:713:3:98:-1.91961,0,-57.2638 0|0:27:25,2:25:844:2:69:0,-1.57515,-69.7194 0|1:24:21,3:21:688:3:96:-1.73309,0,-55.0043 0|1:21:16,4:16:543:4:138:-6.61487,0,-43.0863 0|0:16:16,0:16:535:0:0:0,-4.81648,-48.4689 dDocent_Contig_13060 33 . C A 6571.79 . AB=0.485961;ABP=3.80291;AC=6;AF=0.5;AN=12;AO=225;CIGAR=1X;DP=463;DPB=463;DPRA=0;EPP=491.592;EPPR=519.821;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.991111;PAIREDR=0.995798;PAO=0;PQA=0;PQR=0;PRO=0;QA=8959;QR=9470;RO=238;RPL=0;RPP=491.592;RPPR=519.821;RPR=225;RUN=1;SAF=225;SAP=491.592;SAR=0;SRF=238;SRP=519.821;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:63:25,38:25:988:38:1498:-116.1,0,-70.2486 0/1:90:52,38:52:2055:38:1505:-108.602,0,-158.048 0/1:50:33,17:33:1314:17:689:-47.2876,0,-103.473 0/1:66:50,16:50:1998:16:633:-37.4353,0,-160.145 0/1:81:31,50:31:1231:50:1991:-155,0,-86.6791 0/1:113:47,66:47:1884:66:2643:-203.977,0,-135.743 dDocent_Contig_13061 10 . T C 57.5142 . AB=0.230769;ABP=11.1951;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=197;DPB=197;DPRA=0.353261;EPP=9.52472;EPPR=424.276;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=8.67362e-19;PAIRED=1;PAIREDR=0.994845;PAO=0;PQA=0;PQR=0;PRO=0;QA=120;QR=7295;RO=194;RPL=0;RPP=9.52472;RPPR=424.276;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=194;SRP=424.276;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:36,0:36:1345:0:0:0,-10.8371,-121.331 0/1:13:10,3:10:377:3:120:-7.2743,0,-30.368 0/0:25:25,0:25:955:0:0:0,-7.52575,-86.2634 0/0:52:52,0:52:1905:0:0:0,-15.6536,-171.696 0/0:27:27,0:27:1020:0:0:0,-8.12781,-92.1011 0/0:44:44,0:44:1693:0:0:0,-13.2453,-152.624 dDocent_Contig_13062 16 . C T 3549.74 . AB=0.393939;ABP=35.2534;AC=6;AF=0.5;AN=12;AO=130;CIGAR=1X;DP=330;DPB=330;DPRA=0;EPP=285.302;EPPR=437.305;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.98;PAO=0;PQA=0;PQR=0;PRO=0;QA=5152;QR=8029;RO=200;RPL=0;RPP=285.302;RPPR=437.305;RPR=130;RUN=1;SAF=130;SAP=285.302;SAR=0;SRF=200;SRP=437.305;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:62:40,22:40:1604:22:884:-61.2053,0,-125.928 0/1:87:56,31:56:2268:31:1234:-85.1458,0,-178.085 0/1:45:19,26:19:769:26:1047:-80.9737,0,-55.9842 0/1:47:27,20:27:1068:20:771:-55.5492,0,-82.2471 0/1:43:33,10:33:1329:10:407:-24.0463,0,-106.922 0/1:46:25,21:25:991:21:809:-59.2753,0,-75.6387 dDocent_Contig_13063 11 . T A 1304.32 . AB=0.321839;ABP=26.9963;AC=5;AF=0.416667;AN=12;AO=58;CIGAR=1X;DP=245;DPB=245;DPRA=24.3;EPP=128.956;EPPR=409.076;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2163;QR=7224;RO=187;RPL=0;RPP=128.956;RPPR=409.076;RPR=58;RUN=1;SAF=58;SAP=128.956;SAR=0;SRF=187;SRP=409.076;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:2:2,0:2:81:0:0:0,-0.60206,-7.68573 0/1:22:16,6:16:622:6:228:-14.2619,0,-49.6946 0/1:38:21,17:21:821:17:634:-45.9521,0,-62.7703 1/1:20:0,20:0:0:20:735:-66.4668,-6.0206,0 0/0:136:126,10:126:4850:10:380:0,-6.38842,-401.948 0/1:27:22,5:22:850:5:186:-8.9726,0,-68.6907 dDocent_Contig_13065 10 . T G 447.445 . AB=0.15847;ABP=188.416;AC=5;AF=0.5;AN=10;AO=36;CIGAR=1X;DP=279;DPB=279;DPRA=0;EPP=81.1833;EPPR=530.678;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.99177;PAO=0;PQA=0;PQR=0;PRO=0;QA=1385;QR=8682;RO=243;RPL=0;RPP=81.1833;RPPR=530.678;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=243;SRP=530.678;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:73:66,7:66:2350:7:281:-3.68649,0,-189.756 0/1:80:69,11:69:2492:11:402:-12.426,0,-200.425 0/1:30:19,11:19:664:11:428:-29.8362,0,-51.0465 0/0:95:89,6:89:3176:6:233:0,-7.26244,-264.704 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_13066 7 . A G 396.527 . AB=0.316667;ABP=20.5268;AC=4;AF=0.333333;AN=12;AO=31;CIGAR=1X;DP=226;DPB=226;DPRA=0;EPP=70.3259;EPPR=419.933;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.290323;PAIREDR=0.989583;PAO=0;PQA=0;PQR=0;PRO=0;QA=975;QR=7299;RO=192;RPL=0;RPP=70.3259;RPPR=419.933;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=192;SRP=419.933;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:37,3:37:1415:3:108:0,-1.96631,-117.558 0/1:53:38,13:38:1450:13:424:-22.9019,0,-115.229 0/0:47:46,1:46:1756:1:27:0,-11.4486,-155.598 0/0:78:70,7:70:2640:7:181:0,-6.76505,-221.273 0/1:7:1,6:1:38:6:210:-17.1282,0,-1.69006 1/1:1:0,1:0:0:1:25:-2.49986,-0.30103,0 dDocent_Contig_13067 22 . C T 192.027 . AB=0.144144;ABP=125.102;AC=2;AF=0.166667;AN=12;AO=24;CIGAR=1X;DP=394;DPB=394;DPRA=1.37619;EPP=55.1256;EPPR=806.455;GTI=0;LEN=1;MEANALT=1;MQM=58.1667;MQMR=56.1216;NS=6;NUMALT=1;ODDS=0;PAIRED=0.958333;PAIREDR=0.894595;PAO=0;PQA=0;PQR=0;PRO=0;QA=942;QR=14722;RO=370;RPL=0;RPP=55.1256;RPPR=806.455;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=370;SRP=806.455;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:49,5:49:1940:5:192:-1.39366,0,-138.138 0/0:105:101,4:101:3969:4:151:0,-17.6527,-341.539 0/0:73:69,4:69:2769:4:157:0,-7.46622,-231.562 0/1:57:46,11:46:1855:11:442:-20.708,0,-123.974 0/0:49:49,0:49:1963:0:0:0,-14.7505,-171.926 0/0:56:56,0:56:2226:0:0:0,-16.8577,-195.641 dDocent_Contig_13068 79 . G T 61.3849 . AB=0.190476;ABP=20.4855;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=157;DPB=157;DPRA=0.772059;EPP=11.6962;EPPR=335.246;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.54902;PAO=0;PQA=0;PQR=0;PRO=0;QA=148;QR=5315;RO=153;RPL=4;RPP=11.6962;RPPR=335.246;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=153;SRP=335.246;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:17,4:17:600:4:148:-7.36034,0,-48.006 0/0:23:23,0:23:794:0:0:0,-6.92369,-71.7697 0/0:21:21,0:21:732:0:0:0,-6.32163,-66.1948 0/0:31:31,0:31:1077:0:0:0,-9.33193,-97.2341 0/0:17:17,0:17:604:0:0:0,-5.11751,-54.6894 0/0:44:44,0:44:1508:0:0:0,-13.2453,-136 dDocent_Contig_13069 16 . G A 299.549 . AB=0.285714;ABP=19.7617;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=232;DPB=232;DPRA=1.18116;EPP=37.7539;EPPR=472.048;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.375;PAIREDR=0.226852;PAO=0;PQA=0;PQR=0;PRO=0;QA=641;QR=8515;RO=216;RPL=0;RPP=37.7539;RPPR=472.048;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=216;SRP=472.048;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:30,12:30:1198:12:483:-31.1767,0,-95.4541 0/0:40:40,0:40:1549:0:0:0,-12.0412,-139.656 0/0:28:26,2:26:1035:2:76:0,-1.21458,-86.2268 0/0:42:41,1:41:1629:1:41:0,-8.54869,-142.751 0/0:29:29,0:29:1163:0:0:0,-8.72987,-104.949 0/0:51:50,1:50:1941:1:41:0,-11.258,-170.794 dDocent_Contig_13070 98 . N A 125.761 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=7.37776;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=136;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:136:-12.5759,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13071 22 . G T 203.666 . AB=0.158537;ABP=86.0559;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=186;DPB=186;DPRA=1.41558;EPP=33.4109;EPPR=376.504;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.928571;PAIREDR=0.860465;PAO=0;PQA=0;PQR=0;PRO=0;QA=568;QR=6870;RO=172;RPL=0;RPP=33.4109;RPPR=376.504;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=172;SRP=376.504;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:470:0:0:0,-3.61236,-42.6468 0/0:18:18,0:18:711:0:0:0,-5.41854,-64.3131 0/0:27:26,1:26:1041:1:40:0,-4.13213,-89.9841 0/1:12:9,3:9:361:3:122:-7.76013,0,-29.2409 0/0:47:47,0:47:1895:0:0:0,-14.1484,-170.746 0/1:70:60,10:60:2392:10:406:-15.8283,0,-194.356 dDocent_Contig_13072 92 . C A 1230.08 . AB=0.0622568;ABP=430.757;AC=0;AF=0;AN=12;AO=16;CIGAR=9M1X4M;DP=356;DPB=361.214;DPRA=5.19192;EPP=37.7539;EPPR=561.079;GTI=0;LEN=1;MEANALT=5.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.996109;PAO=0;PQA=0;PQR=0;PRO=0;QA=552;QR=8450;RO=257;RPL=16;RPP=37.7539;RPPR=561.079;RPR=0;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=257;SRP=561.079;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:8:8,0,0:8:247:0,0:0,0:0,-2.40824,-22.5332,-2.40824,-22.5332,-22.5332 0|0:24:23,0,0:23:774:0,0:0,0:0,-6.92369,-69.6351,-6.92369,-69.6351,-69.6351 0|0:31:30,0,0:30:981:0,0:0,0:0,-9.0309,-88.2432,-9.0309,-88.2432,-88.2432 0|0:36:35,0,0:35:1149:0,0:0,0:0,-10.536,-103.632,-10.536,-103.632,-103.632 0|0:110:59,38,10:59:1950:38,10:1165,348:-75.6117,0,-146.255,-65.0657,-129.393,-219.762 0|0:147:102,35,6:102:3349:35,6:1021,204:-50.6185,0,-260.105,-64.769,-254.093,-333.612 dDocent_Contig_13073 107 . N A 973.776 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=31;CIGAR=1X;DP=31;DPB=31;DPRA=0;EPP=70.3259;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.935484;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1051;QR=0;RO=0;RPL=0;RPP=70.3259;RPPR=0;RPR=31;RUN=1;SAF=0;SAP=70.3259;SAR=31;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:5:0,5:0:0:5:156:-14.3485,-1.50515,0 1/1:11:0,11:0:0:11:381:-34.6235,-3.31133,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:7:0,7:0:0:7:234:-21.3871,-2.10721,0 1/1:5:0,5:0:0:5:175:-16.0937,-1.50515,0 dDocent_Contig_13074 10 . G C 637.212 . AB=0.238462;ABP=80.2479;AC=5;AF=0.416667;AN=12;AO=31;CIGAR=1X;DP=180;DPB=180;DPRA=0.52;EPP=70.3259;EPPR=326.56;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.419355;PAIREDR=0.436242;PAO=0;PQA=0;PQR=0;PRO=0;QA=1225;QR=5992;RO=149;RPL=0;RPP=70.3259;RPPR=326.56;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=149;SRP=326.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:16,7:16:651:7:283:-18.9197,0,-51.9984 0/1:47:41,6:41:1665:6:223:-6.27329,0,-135.922 0/1:15:9,6:9:367:6:242:-17.6415,0,-28.8798 0/1:34:24,10:24:950:10:403:-26.3945,0,-75.5643 0/1:11:9,2:9:359:2:74:-3.71269,0,-29.36 0/0:50:50,0:50:2000:0:0:0,-15.0515,-180.188 dDocent_Contig_13075 39 . T A 390.421 . AB=0.666667;ABP=3.73412;AC=3;AF=0.25;AN=12;AO=15;CIGAR=1X;DP=85;DPB=85;DPRA=0.666667;EPP=35.5824;EPPR=155.013;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.533333;PAIREDR=0.971429;PAO=0;PQA=0;PQR=0;PRO=0;QA=485;QR=2321;RO=70;RPL=0;RPP=35.5824;RPPR=155.013;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=70;SRP=155.013;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:618:0:0:0,-5.71957,-55.9287 0/0:20:20,0:20:670:0:0:0,-6.0206,-60.6155 0/0:12:12,0:12:403:0:0:0,-3.61236,-36.5947 0/0:19:18,1:18:596:1:35:0,-2.22094,-50.4546 1/1:12:0,12:0:0:12:382:-34.6866,-3.61236,0 0/1:3:1,2:1:34:2:68:-5.55484,0,-2.49582 dDocent_Contig_13076 15 . T G 135.058 . AB=0.0306122;ABP=190.555;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1M6I7M1X5M1X3M;DP=409;DPB=413.944;DPRA=0.630225;EPP=9.52472;EPPR=211.472;GTI=0;LEN=1;MEANALT=7;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=1.9;PQA=33.9;PQR=3.4;PRO=0.4;QA=15;QR=3208;RO=96;RPL=0;RPP=9.52472;RPPR=211.472;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=96;SRP=211.472;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:67:20,0,0,0,0:20:665:0,0,0,0:0,0,0,0:0,-6.0206,-59.8278,-6.0206,-59.8278,-59.8278,-6.0206,-59.8278,-59.8278,-59.8278,-6.0206,-59.8278,-59.8278,-59.8278,-59.8278 0|0:104:17,0,0,4,0:17:572:0,0,4,0:0,0,33,0:0,-5.11751,-51.4619,-5.11751,-51.4619,-51.4619,-3.36447,-49.7066,-49.7066,-48.5025,-5.11751,-51.4619,-51.4619,-49.7066,-51.4619 0|0:48:9,0,0,0,0:9:299:0,0,0,0:0,0,0,0:0,-2.70927,-26.8941,-2.70927,-26.8941,-26.8941,-2.70927,-26.8941,-26.8941,-26.8941,-2.70927,-26.8941,-26.8941,-26.8941,-26.8941 0|0:92:39,0,0,3,0:39:1308:0,0,3,0:0,0,25,0:0,-11.7402,-117.682,-11.7402,-117.682,-117.682,-10.4086,-116.343,-116.343,-115.44,-11.7402,-117.682,-117.682,-116.343,-117.682 0|0:47:11,0,1,0,7:11:364:0,1,0,7:0,5,0,112:-4.62352,-7.93485,-37.3766,-7.7935,-37.2335,-36.9325,-7.93485,-37.3766,-37.2335,-37.3766,0,-29.4319,-29.2906,-29.4319,-27.3247 1|0:51:0,3,2,0,8:0:0:3,2,0,8:58,10,0,112:-11.9485,-7.63839,-6.7353,-11.6608,-7.3516,-11.0587,-11.9485,-7.63839,-11.6608,-11.9485,-4.3066,0,-4.02228,-4.3066,-1.89836 dDocent_Contig_13077 65 . G A 2474.75 . AB=0.441624;ABP=8.84131;AC=4;AF=0.5;AN=8;AO=87;CIGAR=1X;DP=197;DPB=197;DPRA=0;EPP=191.928;EPPR=241.872;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990909;PAO=0;PQA=0;PQR=0;PRO=0;QA=3477;QR=4358;RO=110;RPL=87;RPP=191.928;RPPR=241.872;RPR=0;RUN=1;SAF=87;SAP=191.928;SAR=0;SRF=110;SRP=241.872;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:91:49,42:49:1950:42:1670:-123.138,0,-148.306 0/1:26:16,10:16:632:10:398:-28.3512,0,-49.3858 0/1:29:19,10:19:729:10:405:-28.0802,0,-57.196 0/1:51:26,25:26:1047:25:1004:-75.3034,0,-79.1677 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13078 57 . C T 5806.33 . AB=0.669388;ABP=64.0686;AC=7;AF=0.583333;AN=12;AO=188;CIGAR=1X;DP=271;DPB=271;DPRA=0;EPP=411.247;EPPR=181.071;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.8617;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.585106;PAIREDR=0.426829;PAO=0;PQA=0;PQR=0;PRO=0;QA=7443;QR=3301;RO=82;RPL=188;RPP=411.247;RPPR=181.071;RPR=0;RUN=1;SAF=188;SAP=411.247;SAR=0;SRF=82;SRP=181.071;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:17,21:17:666:21:844:-64.8332,0,-48.8263 1/1:26:2,24:2:82:24:957:-78.6508,-0.0471025,0 0/1:38:16,22:16:649:22:848:-65.1788,0,-47.304 0/1:45:21,24:21:849:24:937:-71.0796,0,-63.1742 0/1:65:11,53:11:448:53:2089:-168.549,0,-21.0281 0/1:59:15,44:15:607:44:1768:-141.563,0,-37.2067 dDocent_Contig_13080 39 . G A 81.7278 . AB=0.6;ABP=3.44459;AC=1;AF=0.1;AN=10;AO=3;CIGAR=1X;DP=92;DPB=92;DPRA=0.229885;EPP=9.52472;EPPR=196.271;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.988764;PAO=0;PQA=0;PQR=0;PRO=0;QA=121;QR=3493;RO=89;RPL=0;RPP=9.52472;RPPR=196.271;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=89;SRP=196.271;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:739:0:0:0,-5.71957,-66.8233 0/0:25:25,0:25:993:0:0:0,-7.52575,-89.6707 0/0:29:29,0:29:1149:0:0:0,-8.72987,-103.688 0/0:14:14,0:14:533:0:0:0,-4.21442,-48.3005 ./.:.:.:.:.:.:.:. 0/1:5:2,3:2:79:3:121:-9.77484,0,-5.99209 dDocent_Contig_13081 12 . G A 398.718 . AB=0.172185;ABP=143.955;AC=4;AF=0.333333;AN=12;AO=26;CIGAR=1X;DP=223;DPB=223;DPRA=1.04861;EPP=59.4686;EPPR=430.79;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.576923;PAIREDR=0.84264;PAO=0;PQA=0;PQR=0;PRO=0;QA=983;QR=7862;RO=197;RPL=0;RPP=59.4686;RPPR=430.79;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=197;SRP=430.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:20,15:20:810:15:555:-39.7423,0,-62.6795 0/1:46:41,5:41:1628:5:187:-3.34091,0,-132.907 0/1:35:32,3:32:1278:3:120:-0.651852,0,-104.748 0/1:35:32,3:32:1296:3:121:-0.744147,0,-106.365 0/0:51:51,0:51:2011:0:0:0,-15.3525,-181.179 0/0:21:21,0:21:839:0:0:0,-6.32163,-75.8217 dDocent_Contig_13082 25 . G T 153.741 . AB=0.169811;ABP=53.2;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=400;DPB=400;DPRA=0.824503;EPP=37.7539;EPPR=836.856;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.450521;PAO=0;PQA=0;PQR=0;PRO=0;QA=634;QR=15120;RO=384;RPL=0;RPP=37.7539;RPPR=836.856;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=384;SRP=836.856;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:63:62,1:62:2431:1:41:0,-14.8703,-214.861 0/1:53:44,9:44:1745:9:361:-16.8969,0,-141.32 0/0:62:62,0:62:2425:0:0:0,-18.6639,-218.408 0/0:65:60,5:60:2378:5:191:0,-2.0107,-196.61 0/0:89:89,0:89:3501:0:0:0,-26.7917,-315.131 0/0:68:67,1:67:2640:1:41:0,-16.3755,-233.632 dDocent_Contig_13083 6 . C A 48.9611 . AB=0.666667;ABP=3.73412;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=1X;DP=78;DPB=78;DPRA=0.2;EPP=3.0103;EPPR=168.042;GTI=0;LEN=1;MEANALT=1;MQM=58;MQMR=59.4211;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.973684;PAO=0;PQA=0;PQR=0;PRO=0;QA=77;QR=2952;RO=76;RPL=0;RPP=7.35324;RPPR=168.042;RPR=2;RUN=1;SAF=1;SAP=3.0103;SAR=1;SRF=76;SRP=168.042;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:702:0:0:0,-5.41854,-63.514 0/0:25:25,0:25:969:0:0:0,-7.52575,-87.523 0/0:9:9,0:9:351:0:0:0,-2.70927,-31.9518 0/0:21:21,0:21:813:0:0:0,-6.32163,-73.4949 0/1:3:1,2:1:39:2:77:-6.40264,0,-2.64304 0/0:2:2,0:2:78:0:0:0,-0.60206,-7.07056 dDocent_Contig_13084 25 . A G 42.9511 . AB=0.129032;ABP=40.0654;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=257;DPB=257;DPRA=0.700935;EPP=20.3821;EPPR=543.707;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0.658635;PAO=0;PQA=0;PQR=0;PRO=0;QA=326;QR=9750;RO=249;RPL=0;RPP=20.3821;RPPR=543.707;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=249;SRP=543.707;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:38,1:38:1502:1:40:0,-7.74449,-131.44 0/1:31:27,4:27:1070:4:164:-5.81797,0,-87.259 0/0:36:35,1:35:1381:1:41:0,-6.74251,-120.458 0/0:59:59,0:59:2312:0:0:0,-17.7608,-208.253 0/0:48:48,0:48:1853:0:0:0,-14.4494,-166.994 0/0:44:42,2:42:1632:2:81:0,-5.55959,-139.433 dDocent_Contig_13086 8 . G A 2123.02 . AB=0;ABP=0;AC=4;AF=0.333333;AN=12;AO=64;CIGAR=1X;DP=153;DPB=153;DPRA=1.47727;EPP=141.985;EPPR=196.271;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2387;QR=3381;RO=89;RPL=0;RPP=141.985;RPPR=196.271;RPR=64;RUN=1;SAF=64;SAP=141.985;SAR=0;SRF=89;SRP=196.271;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:815:0:0:0,-6.32163,-73.6754 0/0:33:33,0:33:1256:0:0:0,-9.93399,-113.332 0/0:12:12,0:12:455:0:0:0,-3.61236,-41.297 0/0:22:22,0:22:816:0:0:0,-6.62266,-73.7553 1/1:35:1,34:1:39:34:1271:-110.785,-6.63949,0 1/1:30:0,30:0:0:30:1116:-100.739,-9.0309,0 dDocent_Contig_13088 37 . T G 2887.8 . AB=0.440945;ABP=6.8574;AC=7;AF=0.583333;AN=12;AO=94;CIGAR=1X;DP=165;DPB=165;DPRA=0;EPP=207.129;EPPR=155.013;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.7447;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.93617;PAIREDR=0.885714;PAO=0;PQA=0;PQR=0;PRO=0;QA=3716;QR=2729;RO=70;RPL=0;RPP=207.129;RPPR=155.013;RPR=94;RUN=1;SAF=94;SAP=207.129;SAR=0;SRF=70;SRP=155.013;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:21,7:21:825:7:263:-15.594,0,-66.1333 0/1:16:9,7:9:355:7:277:-20.4809,0,-27.4952 0/1:29:10,19:10:402:19:746:-58.7274,0,-27.8096 0/1:24:15,8:15:560:8:322:-22.016,0,-43.3899 0/1:30:15,15:15:587:15:583:-43.7335,0,-44.132 1/1:38:0,38:0:0:38:1525:-137.45,-11.4391,0 dDocent_Contig_13089 79 . A G 79.4468 . AB=0.285714;ABP=8.59409;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=406;DPB=406;DPRA=0.734007;EPP=24.725;EPPR=862.913;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=341;QR=14285;RO=396;RPL=10;RPP=24.725;RPPR=862.913;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=396;SRP=862.913;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:97:97,0:97:3509:0:0:0,-29.1999,-315.999 0/0:128:128,0:128:4621:0:0:0,-38.5318,-416.026 0/0:65:65,0:65:2331:0:0:0,-19.5669,-210.037 0/0:95:89,6:89:3210:6:193:0,-10.9161,-271.425 0/0:7:7,0:7:252:0:0:0,-2.10721,-23.0276 0/1:14:10,4:10:362:4:148:-9.46755,0,-28.71 dDocent_Contig_13090 12 . G T 78.9579 . AB=0;ABP=0;AC=2;AF=0.2;AN=10;AO=2;CIGAR=1X2M1X;DP=244;DPB=244;DPRA=0.0330579;EPP=7.35324;EPPR=528.507;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=79;QR=9531;RO=242;RPL=0;RPP=7.35324;RPPR=528.507;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=242;SRP=528.507;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:85:85,0:85:3365:0:0:0,-25.5875,-302.931 0|0:51:51,0:51:1991:0:0:0,-15.3525,-179.406 0|0:47:47,0:47:1847:0:0:0,-14.1484,-166.451 0|0:59:59,0:59:2328:0:0:0,-17.7608,-209.702 1|1:2:0,2:0:0:2:79:-7.49763,-0.60206,0 .:.:.:.:.:.:.:. dDocent_Contig_13091 76 . A G 517.433 . AB=0.337662;ABP=20.6359;AC=2;AF=0.25;AN=8;AO=26;CIGAR=1X;DP=101;DPB=101;DPRA=3.20833;EPP=59.4686;EPPR=165.871;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=863;QR=2576;RO=75;RPL=26;RPP=59.4686;RPPR=165.871;RPR=0;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=75;SRP=165.871;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 0/0:12:12,0:12:409:0:0:0,-3.61236,-37.1381 ./.:.:.:.:.:.:.:. 0/0:12:12,0:12:405:0:0:0,-3.61236,-36.7749 0/1:41:36,5:36:1248:5:175:-3.75147,0,-100.282 0/1:36:15,21:15:514:21:688:-51.3879,0,-35.7483 dDocent_Contig_13093 50 . T C 31.5288 . AB=0.2;ABP=10.8276;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=1X;DP=83;DPB=83;DPRA=0.684932;EPP=7.35324;EPPR=178.9;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.4074;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.975309;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=3177;RO=81;RPL=2;RPP=7.35324;RPPR=178.9;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=81;SRP=178.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:885:0:0:0,-6.62266,-79.9554 0/0:18:18,0:18:714:0:0:0,-5.41854,-64.5866 0/0:14:14,0:14:517:0:0:0,-4.21442,-46.8508 0/0:14:14,0:14:545:0:0:0,-4.21442,-49.3895 0/1:10:8,2:8:311:2:81:-4.67543,0,-24.5342 0/0:5:5,0:5:205:0:0:0,-1.50515,-18.835 dDocent_Contig_13094 16 . A G 162.919 . AB=0.15625;ABP=68.6973;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=216;DPB=216;DPRA=3.65385;EPP=31.7504;EPPR=251.813;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.647059;PAIREDR=0.582915;PAO=0;PQA=0;PQR=0;PRO=0;QA=680;QR=7945;RO=199;RPL=0;RPP=39.9253;RPPR=435.133;RPR=17;RUN=1;SAF=16;SAP=31.7504;SAR=1;SRF=175;SRP=251.813;SRR=24;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:25,2:25:980:2:76:0,-0.914273,-81.2878 0/0:43:40,3:40:1598:3:114:0,-2.31507,-133.425 0/0:56:54,2:54:2188:2:82:0,-9.078,-189.304 0/1:64:54,10:54:2153:10:408:-17.8147,0,-174.677 0/0:16:16,0:16:632:0:0:0,-4.81648,-57.2102 0/0:10:10,0:10:394:0:0:0,-3.0103,-35.8165 dDocent_Contig_13095 152 . A G 270.494 . AB=0.126126;ABP=272.547;AC=5;AF=0.416667;AN=12;AO=28;CIGAR=1X;DP=246;DPB=246;DPRA=1.85;EPP=40.5458;EPPR=476.391;GTI=0;LEN=1;MEANALT=1;MQM=59.6786;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.43578;PAO=0;PQA=0;PQR=0;PRO=0;QA=1109;QR=8678;RO=218;RPL=0;RPP=63.8115;RPPR=476.391;RPR=28;RUN=1;SAF=3;SAP=40.5458;SAR=25;SRF=0;SRP=476.391;SRR=218;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:18,2:18:709:2:69:-0.528979,0,-58.1118 0/1:49:43,6:43:1720:6:232:-6.47837,0,-140.268 0/1:83:74,9:74:2960:9:361:-7.86749,0,-241.494 0/1:58:49,9:49:1930:9:365:-15.7551,0,-156.432 0/0:24:24,0:24:956:0:0:0,-7.22472,-86.3383 0/1:12:10,2:10:403:2:82:-4.16732,0,-33.0179 dDocent_Contig_13097 10 . C A 67.3855 . AB=0.146341;ABP=47.552;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=312;DPB=312;DPRA=0.728346;EPP=22.5536;EPPR=658.795;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.555556;PAIREDR=0.486755;PAO=0;PQA=0;PQR=0;PRO=0;QA=346;QR=12089;RO=302;RPL=0;RPP=22.5536;RPPR=658.795;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=302;SRP=658.795;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:47,1:47:1891:1:41:0,-10.3549,-166.296 0/0:66:66,0:66:2631:0:0:0,-19.868,-236.912 0/0:61:61,0:61:2422:0:0:0,-18.3628,-218.125 0/0:56:54,1:54:2173:1:40:0,-12.9357,-191.762 0/0:40:39,1:39:1561:1:40:0,-8.04552,-136.731 0/1:41:35,6:35:1411:6:225:-8.26143,0,-114.899 dDocent_Contig_13098 60 . A G 123.91 . AB=0.25;ABP=16.0391;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=1X;DP=74;DPB=74;DPRA=1.05556;EPP=18.2106;EPPR=148.499;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.985075;PAO=0;PQA=0;PQR=0;PRO=0;QA=283;QR=2639;RO=67;RPL=7;RPP=18.2106;RPPR=148.499;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=67;SRP=148.499;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:284:0:0:0,-2.10721,-25.934 0/1:15:12,3:12:482:3:122:-6.85704,0,-39.2157 0/1:9:6,3:6:237:3:123:-8.75552,0,-18.9919 0/0:14:13,1:13:518:1:38:0,-0.417151,-43.1698 0/0:13:13,0:13:493:0:0:0,-3.91339,-44.7093 0/0:16:16,0:16:625:0:0:0,-4.81648,-56.5774 dDocent_Contig_13099 23 . G A 214.787 . AB=0.25641;ABP=23.1103;AC=3;AF=0.25;AN=12;AO=10;CIGAR=1X;DP=70;DPB=70;DPRA=1.25806;EPP=24.725;EPPR=131.127;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.830508;PAO=0;PQA=0;PQR=0;PRO=0;QA=393;QR=2341;RO=59;RPL=0;RPP=24.725;RPPR=131.127;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=59;SRP=131.127;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:11:5,6:5:184:6:232:-17.9349,0,-13.6016 0/1:15:12,3:12:477:3:121:-6.76475,0,-38.7638 0/0:11:11,0:11:437:0:0:0,-3.31133,-39.685 0/1:13:12,1:12:487:1:40:-0.0822893,0,-40.2677 0/0:6:6,0:6:227:0:0:0,-1.80618,-20.7917 0/0:14:13,0:13:529:0:0:0,-3.91339,-47.5476 dDocent_Contig_13100 23 . C A 1666.86 . AB=0.240143;ABP=166.649;AC=7;AF=0.583333;AN=12;AO=71;CIGAR=1X4M;DP=283;DPB=283;DPRA=0;EPP=157.185;EPPR=439.476;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=0;PAIREDR=0.910448;PAO=0;PQA=0;PQR=0;PRO=0;QA=2841;QR=7911;RO=201;RPL=0;RPP=157.185;RPPR=439.476;RPR=71;RUN=1;SAF=71;SAP=157.185;SAR=0;SRF=201;SRP=439.476;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:60:30,1,28:30:1178:1,28:40,1121:-83.3143,-89.0501,-185.627,0,-93.5795,-88.446 0|1:80:63,1,16:63:2482:1,16:40,645:-34.2032,-49.8732,-253.748,0,-200.882,-199.361 0|1:50:29,8,13:29:1146:8,13:310,525:-34.5589,-17.829,-109.716,0,-68.8424,-90.3933 0|1:85:77,0,8:77:3032:0,8:0,320:-3.57922,-26.7585,-276.175,0,-249.815,-247.407 0|1:4:2,0,2:2:73:0,2:0,82:-6.57556,-7.17762,-13.1185,0,-6.32801,-5.72595 1|1:4:0,0,4:0:0:0,4:0,148:-13.6748,-13.6748,-13.6748,-1.20412,-1.20412,0 dDocent_Contig_13101 51 . T G 2622.09 . AB=0.09375;ABP=48.8827;AC=0;AF=0;AN=12;AO=3;CIGAR=1M1D3M1X9M;DP=309;DPB=302.667;DPRA=0;EPP=9.52472;EPPR=198.443;GTI=0;LEN=1;MEANALT=7;MQM=60;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=103;QR=3335;RO=90;RPL=3;RPP=9.52472;RPPR=198.443;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=90;SRP=198.443;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:21:8,0,0,3,2,1,0,0,4,1:8:287:0,0,3,2,1,0,0,4,1:0,0,106,77,33,0,0,131,41:-8.16673,-10.575,-33.9871,-10.575,-33.9871,-33.9871,-1.94182,-25.356,-25.356,-24.4529,-4.24526,-27.661,-27.661,-19.0291,-27.0589,-7.90799,-31.3199,-31.3199,-22.6889,-24.9937,-31.0188,-10.575,-33.9871,-33.9871,-25.356,-27.661,-31.3199,-33.9871,-10.575,-33.9871,-33.9871,-25.356,-27.661,-31.3199,-33.9871,-33.9871,0,-23.4098,-23.4098,-14.7797,-17.0835,-20.7432,-23.4098,-23.4098,-22.2057,-7.18547,-30.6,-30.6,-21.9683,-24.2734,-27.9327,-30.6,-30.6,-20.0223,-30.299 0|0:65:18,0,0,15,1,2,1,19,2,4:18:661:0,0,15,1,2,1,19,2,4:0,0,519,40,38,37,650,68,157:-47.3395,-52.7581,-106.802,-52.7581,-106.802,-106.802,-10.5951,-64.6408,-64.6408,-60.1254,-49.4618,-103.506,-103.506,-61.3447,-103.205,-49.9473,-103.989,-103.989,-61.8299,-100.693,-103.387,-49.7305,-103.774,-103.774,-61.6134,-100.478,-100.962,-103.473,0,-54.0457,-54.0457,-11.8874,-50.7496,-51.2355,-51.0183,-48.3261,-47.2423,-101.286,-101.286,-59.1254,-97.99,-98.4735,-98.2586,-48.5304,-100.684,-39.8421,-93.8873,-93.8873,-51.7258,-90.5913,-91.075,-90.8599,-41.1306,-88.3716,-92.6832 0|0:104:25,14,0,41,5,2,8,4,0,1:25:927:14,0,41,5,2,8,4,0,1:454,0,1561,192,70,310,129,0,34:-120.516,-91.4224,-163.059,-128.042,-167.274,-203.896,0,-39.2415,-75.8604,-63.5182,-112.282,-151.514,-188.136,-60.0989,-186.63,-122.349,-161.581,-198.202,-70.1671,-182.442,-197.6,-102.572,-141.804,-178.426,-50.3881,-162.666,-172.733,-176.018,-117.644,-156.876,-193.498,-65.4629,-177.737,-187.804,-168.028,-192.293,-128.042,-167.274,-203.896,-75.8604,-188.136,-198.202,-178.426,-193.498,-203.896,-125.284,-164.516,-201.138,-73.1027,-185.378,-195.445,-175.668,-190.74,-201.138,-200.837 0|0:32:5,0,3,8,1,5,4,5,1,0:5:187:0,3,8,1,5,4,5,1,0:0,103,301,40,192,156,184,35,0:-23.6037,-25.1088,-40.4227,-16.7546,-32.0679,-31.1648,-0.447578,-15.7616,-7.40791,-13.3534,-21.8127,-37.1268,-28.772,-12.4654,-36.8258,-9.3477,-24.662,-16.3076,0,-21.3659,-23.1568,-12.2826,-27.597,-19.2424,-2.93488,-24.3009,-11.8355,-26.3929,-10.0648,-25.3784,-17.0244,-0.717636,-22.0824,-9.61754,-12.5524,-23.8732,-22.262,-37.5758,-29.2211,-12.9149,-34.2799,-21.8151,-24.7501,-22.5316,-37.2747,-25.1088,-40.4227,-32.0679,-15.7616,-37.1268,-24.662,-27.597,-25.3784,-37.5758,-40.4227 0|0:28:13,0,0,8,0,0,0,5,0,0:13:486:0,0,8,0,0,0,5,0,0:0,0,284,0,0,0,178,0,0:-19.2432,-23.1566,-62.9716,-23.1566,-62.9716,-62.9716,0,-39.8361,-39.8361,-37.4278,-23.1566,-62.9716,-62.9716,-39.8361,-62.9716,-23.1566,-62.9716,-62.9716,-39.8361,-62.9716,-62.9716,-23.1566,-62.9716,-62.9716,-39.8361,-62.9716,-62.9716,-62.9716,-8.63896,-48.4634,-48.4634,-25.3274,-48.4634,-48.4634,-48.4634,-46.9583,-23.1566,-62.9716,-62.9716,-39.8361,-62.9716,-62.9716,-62.9716,-48.4634,-62.9716,-23.1566,-62.9716,-62.9716,-39.8361,-62.9716,-62.9716,-62.9716,-48.4634,-62.9716,-62.9716 0|0:59:21,0,0,19,1,0,0,13,0,2:21:787:0,0,19,1,0,0,13,0,2:0,0,740,40,0,0,451,0,82:-54.5224,-60.844,-125.309,-60.844,-125.309,-125.309,0,-64.4807,-64.4807,-58.7612,-57.5479,-122.013,-122.013,-61.1845,-121.712,-60.844,-125.309,-125.309,-64.4807,-122.013,-125.309,-60.844,-125.309,-125.309,-64.4807,-122.013,-125.309,-125.309,-24.1916,-88.6539,-88.6539,-27.8247,-85.3582,-88.6539,-88.6539,-84.7405,-60.844,-125.309,-125.309,-64.4807,-122.013,-125.309,-125.309,-88.6539,-125.309,-54.0732,-118.539,-118.539,-57.7098,-115.243,-118.539,-118.539,-81.884,-118.539,-117.937 dDocent_Contig_13105 9 . G A 124.733 . AB=0.122807;ABP=143.889;AC=1;AF=0.0833333;AN=12;AO=26;CIGAR=1X;DP=791;DPB=791;DPRA=1.382;EPP=59.4686;EPPR=1664.19;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9987;NS=6;NUMALT=1;ODDS=0;PAIRED=0.923077;PAIREDR=0.780392;PAO=0;PQA=0;PQR=0;PRO=0;QA=994;QR=29094;RO=765;RPL=0;RPP=59.4686;RPPR=1664.19;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=765;SRP=1664.19;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:119:116,3:116:4390:3:113:0,-25.2836,-384.628 0/0:170:168,2:168:6398:2:78:0,-43.7716,-568.34 0/0:100:100,0:100:3776:0:0:0,-30.103,-339.958 0/1:114:100,14:100:3825:14:533:-13.9962,0,-310.037 0/0:163:158,5:158:6032:5:194:0,-31.235,-524.996 0/0:125:123,2:123:4673:2:76:0,-30.4141,-413.408 dDocent_Contig_13106 63 . A G 99.3263 . AB=0.150943;ABP=59.0998;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=202;DPB=202;DPRA=0.711409;EPP=20.3821;EPPR=424.276;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.125;PAIREDR=0.412371;PAO=0;PQA=0;PQR=0;PRO=0;QA=315;QR=7580;RO=194;RPL=8;RPP=20.3821;RPPR=424.276;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=194;SRP=424.276;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:343:0:0:0,-2.70927,-31.2188 0/0:33:33,0:33:1288:0:0:0,-9.93399,-116.194 0/1:32:27,5:27:1048:5:196:-8.38097,0,-84.9778 0/1:21:18,3:18:690:3:119:-4.77338,0,-56.0909 0/0:50:50,0:50:1955:0:0:0,-15.0515,-176.155 0/0:57:57,0:57:2256:0:0:0,-17.1587,-203.215 dDocent_Contig_13107 67 . A G 288.469 . AB=0.119601;ABP=381.33;AC=3;AF=0.375;AN=8;AO=36;CIGAR=1X;DP=363;DPB=363;DPRA=1.61828;EPP=81.1833;EPPR=702.251;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=59.9202;NS=4;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.996933;PAO=0;PQA=0;PQR=0;PRO=0;QA=1354;QR=12125;RO=326;RPL=36;RPP=81.1833;RPPR=710.91;RPR=0;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=325;SRP=702.251;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:60:50,10:50:1838:10:382:-16.6692,0,-147.611 0/1:189:171,17:171:6355:17:629:-0.230507,0,-515.172 0/1:52:43,9:43:1582:9:343:-15.5738,0,-126.984 0/0:62:62,0:62:2350:0:0:0,-18.6639,-211.008 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13108 8 . G C 751.088 . AB=0.360465;ABP=17.5541;AC=5;AF=0.416667;AN=12;AO=31;CIGAR=1X;DP=92;DPB=92;DPRA=2.86667;EPP=70.3259;EPPR=133.299;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.741935;PAIREDR=0.983333;PAO=0;PQA=0;PQR=0;PRO=0;QA=1205;QR=2304;RO=60;RPL=0;RPP=70.3259;RPPR=133.299;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=60;SRP=133.299;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:6:6,0:6:233:0:0:0,-1.80618,-21.3401 0/1:19:13,6:13:502:6:230:-15.3468,0,-39.809 0/1:3:1,2:1:39:2:78:-6.50038,0,-2.99347 0/1:25:22,3:22:852:3:117:-3.38463,0,-69.4767 0/1:11:8,3:8:312:3:117:-7.59905,0,-25.1336 0/1:28:10,17:10:366:17:663:-51.4896,0,-24.7684 dDocent_Contig_13109 63 . T A 148.011 . AB=0.148148;ABP=90.1105;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=432;DPB=432;DPRA=0.73494;EPP=46.4397;EPPR=895.485;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.479319;PAO=0;PQA=0;PQR=0;PRO=0;QA=778;QR=15469;RO=411;RPL=14;RPP=9.95901;RPPR=32.7294;RPR=6;RUN=1;SAF=14;SAP=9.95901;SAR=6;SRF=243;SRP=32.7294;SRR=168;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:32,4:32:1184:4:156:-3.57875,0,-96.0114 0/0:102:94,8:94:3569:8:315:0,-1.99185,-292.599 0/1:45:37,8:37:1400:8:307:-14.4423,0,-112.728 0/0:95:95,0:95:3591:0:0:0,-28.5978,-323.278 0/0:56:55,0:55:2038:0:0:0,-16.5566,-183.362 0/0:98:98,0:98:3687:0:0:0,-29.5009,-331.935 dDocent_Contig_13110 15 . G T 2717.98 . AB=0.666667;ABP=34.1347;AC=1;AF=0.1;AN=10;AO=86;CIGAR=1X;DP=300;DPB=300;DPRA=3.01754;EPP=189.757;EPPR=467.705;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0.790698;PAIREDR=0.766355;PAO=0;PQA=0;PQR=0;PRO=0;QA=3469;QR=8394;RO=214;RPL=0;RPP=189.757;RPPR=467.705;RPR=86;RUN=1;SAF=86;SAP=189.757;SAR=0;SRF=214;SRP=467.705;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:60:60,0:60:2326:0:0:0,-18.0618,-209.49 0/0:28:28,0:28:1103:0:0:0,-8.42884,-99.5524 0/0:81:81,0:81:3186:0:0:0,-24.3834,-286.793 0/1:129:43,86:43:1697:86:3469:-273.4,0,-114.124 0/0:2:2,0:2:82:0:0:0,-0.60206,-7.77968 ./.:.:.:.:.:.:.:. dDocent_Contig_13111 21 . T G 260.478 . AB=0.150442;ABP=122.941;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1X;DP=472;DPB=472;DPRA=0.710256;EPP=52.9542;EPPR=978.001;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.995546;PAO=0;PQA=0;PQR=0;PRO=0;QA=940;QR=17944;RO=449;RPL=0;RPP=52.9542;RPPR=978.001;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=449;SRP=978.001;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:50:44,6:44:1758:6:246:-7.46862,0,-143.383 0/0:54:54,0:54:2145:0:0:0,-16.2556,-193.215 0/0:97:96,1:96:3862:1:41:0,-25.1053,-343.478 0/1:63:52,11:52:2091:11:449:-21.801,0,-169.403 0/0:67:62,5:62:2513:5:204:0,-1.42498,-207.553 0/0:141:141,0:141:5575:0:0:0,-42.4452,-501.563 dDocent_Contig_13112 20 . A T 195.766 . AB=0.275862;ABP=15.6647;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=331;DPB=331;DPRA=0.480132;EPP=20.3821;EPPR=704.396;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.98452;PAO=0;PQA=0;PQR=0;PRO=0;QA=324;QR=12765;RO=323;RPL=0;RPP=20.3821;RPPR=704.396;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=323;SRP=704.396;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:29:21,8:21:841:8:324:-20.7984,0,-67.2722 0/0:78:78,0:78:3063:0:0:0,-23.4803,-275.764 0/0:38:38,0:38:1515:0:0:0,-11.4391,-136.597 0/0:60:60,0:60:2348:0:0:0,-18.0618,-211.486 0/0:53:53,0:53:2088:0:0:0,-15.9546,-188.114 0/0:73:73,0:73:2910:0:0:0,-21.9752,-261.999 dDocent_Contig_13113 18 . G A 504.206 . AB=0.143969;ABP=285.969;AC=4;AF=0.333333;AN=12;AO=42;CIGAR=1X;DP=328;DPB=328;DPRA=0;EPP=94.2121;EPPR=624.051;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1686;QR=11434;RO=286;RPL=0;RPP=94.2121;RPPR=624.051;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=286;SRP=624.051;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:41,3:41:1651:3:122:0,-1.87283,-137.443 0/1:69:59,10:59:2397:10:401:-15.6765,0,-195.094 0/1:91:82,9:82:3264:9:362:-5.54935,0,-266.421 0/1:44:35,9:35:1374:9:359:-19.4273,0,-110.659 0/0:27:25,2:25:987:2:80:0,-0.536019,-81.5287 0/1:53:44,9:44:1761:9:362:-16.9892,0,-142.751 dDocent_Contig_13115 24 . C T 431.522 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=121;DPB=121;DPRA=0.654206;EPP=31.2394;EPPR=237.529;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=4.33681e-19;PAIRED=1;PAIREDR=0.981481;PAO=0;PQA=0;PQR=0;PRO=0;QA=507;QR=4316;RO=108;RPL=0;RPP=31.2394;RPPR=237.529;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=108;SRP=237.529;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:759:0:0:0,-5.71957,-68.6264 0/0:29:29,0:29:1167:0:0:0,-8.72987,-105.307 1/1:14:1,13:1:33:13:507:-42.675,-0.915285,0 0/0:26:26,0:26:1058:0:0:0,-7.82678,-95.5073 0/0:19:19,0:19:759:0:0:0,-5.71957,-68.6281 0/0:14:14,0:14:540:0:0:0,-4.21442,-48.9341 dDocent_Contig_13116 39 . A G 236.393 . AB=0.137681;ABP=160.363;AC=3;AF=0.25;AN=12;AO=19;CIGAR=5M1X;DP=224;DPB=223.5;DPRA=1.60465;EPP=44.2683;EPPR=441.648;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.263158;PAIREDR=0.60396;PAO=0;PQA=0;PQR=0;PRO=0;QA=764;QR=7943;RO=202;RPL=0;RPP=44.2683;RPPR=441.648;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=202;SRP=441.648;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:30:26,0,4:26:1021:0,4:0,160:-5.75253,-13.5793,-97.5444,0,-84.3636,-83.1595 0|1:45:34,3,8:34:1346:3,8:113,324:-16.5019,-17.4871,-127.357,0,-101.542,-108.389 0|0:22:22,0,0:22:873:0,0:0,0:0,-6.62266,-78.8828,-6.62266,-78.8828,-78.8828 0|1:63:56,0,7:56:2177:0,7:0,280:-6.60667,-23.4643,-202.332,0,-179.266,-177.159 0|0:28:28,0,0:28:1114:0,0:0,0:0,-8.42884,-100.549,-8.42884,-100.549,-100.549 0|0:36:36,0,0:36:1412:0,0:0,0:0,-10.8371,-127.346,-10.8371,-127.346,-127.346 dDocent_Contig_13117 1 . N G 197.949 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=47.5;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=206;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:138:-12.5693,-1.20412,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.37344,-0.30103,0 1/1:1:0,1:0:0:1:34:-3.37344,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13118 44 . T G 949.922 . AB=0.285714;ABP=56.0563;AC=2;AF=0.166667;AN=12;AO=38;CIGAR=1X;DP=277;DPB=277;DPRA=1.84722;EPP=85.5263;EPPR=521.992;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1529;QR=9602;RO=239;RPL=0;RPP=85.5263;RPPR=521.992;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=239;SRP=521.992;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:569:0:0:0,-4.21442,-51.5525 0/0:46:46,0:46:1839:0:0:0,-13.8474,-165.719 0/0:59:59,0:59:2375:0:0:0,-17.7608,-213.897 0/0:25:25,0:25:998:0:0:0,-7.52575,-90.1107 0/1:62:43,19:43:1739:19:768:-50.7772,0,-138.057 0/1:71:52,19:52:2082:19:761:-47.4369,0,-166.177 dDocent_Contig_13119 8 . G A 2482.28 . AB=0.364662;ABP=45.3295;AC=3;AF=0.25;AN=12;AO=97;CIGAR=1X;DP=458;DPB=458;DPRA=1.38542;EPP=213.643;EPPR=786.912;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.99446;PAO=0;PQA=0;PQR=0;PRO=0;QA=3696;QR=13845;RO=361;RPL=0;RPP=213.643;RPPR=786.912;RPR=97;RUN=1;SAF=97;SAP=213.643;SAR=0;SRF=361;SRP=786.912;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:58:51,7:51:1950:7:273:-7.47827,0,-158.282 0/0:91:91,0:91:3498:0:0:0,-27.3937,-314.943 0/0:39:39,0:39:1503:0:0:0,-11.7402,-135.544 0/0:62:62,0:62:2382:0:0:0,-18.6639,-214.588 0/1:81:62,19:62:2368:19:722:-40.9242,0,-188.946 0/1:127:56,71:56:2144:71:2701:-205.048,0,-154.957 dDocent_Contig_13121 16 . C A 1205.51 . AB=0.246006;ABP=178.4;AC=4;AF=0.333333;AN=12;AO=77;CIGAR=2X2M1X;DP=337;DPB=337;DPRA=0;EPP=170.214;EPPR=355.068;GTI=0;LEN=1;MEANALT=2.6;MQM=27.987;MQMR=57.5826;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.866972;PAO=0;PQA=0;PQR=0;PRO=0;QA=3035;QR=8486;RO=218;RPL=0;RPP=170.214;RPPR=476.391;RPR=77;RUN=1;SAF=77;SAP=170.214;SAR=0;SRF=203;SRP=355.068;SRR=15;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:30:9,14,6:9:362:14,6:551,232:-27.3496,0,-25.6504,-10.9665,-10.8028,-39.0463 0|1:76:43,21,12:43:1700:21,12:833,446:-35.0354,0,-132.484,-11.4532,-102.314,-146.701 0|0:97:77,9,11:77:2976:9,11:361,427:-11.9726,-16.213,-248.16,0,-215.781,-231.452 0|1:72:39,28,3:39:1509:28,3:1104,110:-48.5837,0,-112.954,-51.3243,-112.393,-171.772 0|0:24:20,0,4:20:758:0,4:0,152:-6.82448,-12.8451,-74.9879,0,-62.5223,-61.3182 0|1:38:30,5,3:30:1181:5,3:186,116:-0.785416,0,-95.3741,-0.238206,-87.3515,-96.3279 dDocent_Contig_13122 34 . T C 482.444 . AB=0.421053;ABP=4.03889;AC=5;AF=0.416667;AN=12;AO=16;CIGAR=1X;DP=95;DPB=95;DPRA=0.717949;EPP=37.7539;EPPR=174.557;GTI=0;LEN=1;MEANALT=1;MQM=59.4375;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=637;QR=3149;RO=79;RPL=0;RPP=37.7539;RPPR=174.557;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=79;SRP=174.557;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1206:0:0:0,-9.0309,-108.814 0/0:9:9,0:9:344:0:0:0,-2.70927,-31.3118 0/1:19:11,8:11:435:8:323:-23.7196,0,-33.7823 0/0:30:29,1:29:1164:1:36:0,-5.43262,-101.44 1/1:1:0,1:0:0:1:38:-3.79727,-0.30103,0 1/1:6:0,6:0:0:6:240:-21.949,-1.80618,0 dDocent_Contig_13123 169 . T C 421.742 . AB=0.369565;ABP=9.80795;AC=3;AF=0.375;AN=8;AO=17;CIGAR=1X;DP=52;DPB=52;DPRA=2.55556;EPP=39.9253;EPPR=79.0118;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8286;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.971429;PAO=0;PQA=0;PQR=0;PRO=0;QA=670;QR=1318;RO=35;RPL=17;RPP=39.9253;RPPR=79.0118;RPR=0;RUN=1;SAF=0;SAP=39.9253;SAR=17;SRF=0;SRP=79.0118;SRR=35;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 0/1:17:10,7:10:391:7:274:-19.9105,0,-30.4259 0/1:15:8,7:8:299:7:279:-20.9659,0,-22.7305 0/1:14:11,3:11:385:3:117:-6.69579,0,-30.7586 ./.:.:.:.:.:.:.:. 0/0:6:6,0:6:243:0:0:0,-1.80618,-22.2482 dDocent_Contig_13125 9 . C G 17760.9 . AB=0.0975143;ABP=1474.8;AC=0;AF=0;AN=12;AO=102;CIGAR=1X1M1X4M;DP=1428;DPB=1427.57;DPRA=0;EPP=224.5;EPPR=1386.24;GTI=0;LEN=1;MEANALT=7.75;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3799;QR=24921;RO=637;RPL=0;RPP=224.5;RPPR=1386.24;RPR=102;RUN=1;SAF=102;SAP=224.5;SAR=0;SRF=637;SRP=1386.24;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:273:179,3,0,69:179:6987:3,0,69:113,0,2746:-172.21,-216.835,-790.283,-226.095,-791.186,-800.446,0,-565.103,-574.363,-553.592 0|0:297:160,53,0,75:160:6280:53,0,75:1999,0,3008:-199.668,-84.0161,-584.542,-247.832,-600.497,-764.319,0,-352.673,-516.495,-493.918 0|0:183:120,13,0,34:120:4679:13,0,34:465,0,1371:-76.8967,-75.1192,-455.783,-113.02,-459.696,-497.603,0,-346.69,-384.596,-374.361 0|0:293:140,33,0,108:140:5482:33,0,108:1222,0,4327:-314.326,-256.505,-697.328,-356.47,-707.262,-807.231,0,-350.805,-450.773,-418.262 0|0:163:14,0,9,133:14:553:0,9,133:0,353,5328:-434.701,-438.916,-484.421,-409.886,-455.391,-452.682,0,-45.5094,-16.4785,-5.47237 0|0:219:24,0,7,181:24:940:0,7,181:0,253,7244:-589.507,-596.731,-674.025,-576.088,-653.381,-651.274,0,-77.3027,-56.6636,-22.8163 dDocent_Contig_13126 68 . C A 130.91 . AB=0.2;ABP=34.2795;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=289;DPB=289;DPRA=0.778846;EPP=22.5536;EPPR=611.023;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.546429;PAO=0;PQA=0;PQR=0;PRO=0;QA=328;QR=10264;RO=280;RPL=8;RPP=14.8328;RPPR=122.255;RPR=1;RUN=1;SAF=8;SAP=14.8328;SAR=1;SRF=202;SRP=122.255;SRR=78;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:40:32,8:32:1196:8:289:-14.3129,0,-95.8946 0/0:31:31,0:31:1153:0:0:0,-9.33193,-104.069 0/0:41:40,1:40:1474:1:39:0,-8.44566,-129.043 0/0:60:60,0:60:2196:0:0:0,-18.0618,-197.874 0/0:68:68,0:68:2480:0:0:0,-20.47,-223.423 0/0:49:49,0:49:1765:0:0:0,-14.7505,-159.101 dDocent_Contig_13128 98 . N T 164.763 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=5;CIGAR=2X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=172;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:1:0,1:0:0:1:36:-3.59827,-0.30103,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:4:0,4:0:0:4:136:-12.5757,-1.20412,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_13130 12 . C T 666.319 . AB=0.380952;ABP=10.7656;AC=1;AF=0.0833333;AN=12;AO=24;CIGAR=1X2M1X;DP=874;DPB=874;DPRA=0.388409;EPP=55.1256;EPPR=1846.59;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=961;QR=33527;RO=849;RPL=0;RPP=55.1256;RPPR=1846.59;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=849;SRP=1846.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:63:38,24:38:1514:24:961:-67.8538,0,-117.572 0|0:39:39,0:39:1538:0:0:0,-11.7402,-138.668 0|0:62:62,0:62:2463:0:0:0,-18.6639,-221.83 0|0:134:134,0:134:5294:0:0:0,-40.338,-476.351 0|0:263:263,0:263:10375:0:0:0,-79.1709,-933.166 0|0:313:313,0:313:12343:0:0:0,-94.2224,-1110.1 dDocent_Contig_13131 13 . T G 439.525 . AB=0.163158;ABP=190.26;AC=4;AF=0.333333;AN=12;AO=38;CIGAR=1X;DP=280;DPB=280;DPRA=0;EPP=85.5263;EPPR=528.507;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.894737;PAIREDR=0.880165;PAO=0;PQA=0;PQR=0;PRO=0;QA=1458;QR=9372;RO=242;RPL=0;RPP=85.5263;RPPR=528.507;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=242;SRP=528.507;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:17,3:17:667:3:118:-4.98212,0,-54.343 0/1:57:47,10:47:1844:10:377:-17.1226,0,-149.035 0/1:50:41,9:41:1570:9:349:-16.7188,0,-126.509 0/1:63:54,9:54:2049:9:344:-12.3507,0,-165.655 0/0:41:38,3:38:1472:3:117:0,-1.43202,-121.832 0/0:49:45,4:45:1770:4:153:0,-0.609266,-145.395 dDocent_Contig_13132 86 . T A 77.3158 . AB=0.171429;ABP=35.8306;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=184;DPB=184;DPRA=1.37615;EPP=18.2106;EPPR=387.361;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.971751;PAO=0;PQA=0;PQR=0;PRO=0;QA=252;QR=6319;RO=177;RPL=7;RPP=18.2106;RPPR=387.361;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=177;SRP=387.361;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:40:39,1:39:1405:1:36:0,-8.44292,-123.149 0/0:39:39,0:39:1391:0:0:0,-11.7402,-125.486 0/0:31:31,0:31:1093:0:0:0,-9.33193,-98.6756 0/1:35:29,6:29:1035:6:216:-9.25446,0,-82.9259 0/0:18:18,0:18:650:0:0:0,-5.41854,-58.8318 0/0:21:21,0:21:745:0:0:0,-6.32163,-67.3739 dDocent_Contig_13133 28 . A C 1836.46 . AB=0.1;ABP=44.7026;AC=0;AF=0;AN=12;AO=4;CIGAR=13M2X7M;DP=161;DPB=154.5;DPRA=0;EPP=11.6962;EPPR=148.499;GTI=0;LEN=1;MEANALT=3.5;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=0.5;PAIREDR=0.58209;PAO=0;PQA=0;PQR=0;PRO=0;QA=155;QR=2620;RO=67;RPL=0;RPP=11.6962;RPPR=148.499;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=67;SRP=148.499;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:15:13,1,0,0,1,0:13:508:1,0,0,1,0:40,0,0,40,0:0,-0.618309,-42.0711,-3.91339,-42.3721,-45.6678,-3.91339,-42.3721,-45.6678,-45.6678,-0.618309,-39.0764,-42.3721,-42.3721,-42.0711,-3.91339,-42.3721,-45.6678,-45.6678,-42.3721,-45.6678 0|0:26:13,9,0,1,0,2:13:506:9,0,1,0,2:351,0,40,0,82:-24.9249,0,-38.8611,-28.8383,-41.5704,-70.4195,-25.5428,-38.2749,-67.1241,-66.823,-28.8383,-41.5704,-70.4195,-67.1241,-70.4195,-22.0675,-34.8,-63.6498,-60.3544,-63.6498,-63.0478 0|0:16:5,6,0,4,0,1:5:196:6,0,4,0,1:230,0,161,0,38:-17.3616,0,-14.309,-18.8667,-16.1152,-34.9855,-5.59029,-2.84088,-21.7122,-20.5081,-18.8667,-16.1152,-34.9855,-21.7122,-34.9855,-15.7512,-13.0003,-31.8697,-18.5963,-31.8697,-31.5686 0|0:30:9,15,0,1,3,1:9:350:15,0,1,3,1:579,0,40,115,40:-44.8301,0,-24.2442,-47.5394,-28.7597,-76.3011,-44.2437,-25.4639,-73.0056,-72.7045,-38.1029,-19.3242,-66.8644,-63.5689,-65.9613,-44.2437,-25.4639,-73.0056,-69.71,-63.5689,-72.7045 0|0:29:12,15,2,0,0,0:12:476:15,2,0,0,0:547,82,0,0,0:-41.0237,0,-34.6572,-37.8626,-32.4026,-76.4587,-44.6361,-39.1727,-77.0608,-83.8311,-44.6361,-39.1727,-77.0608,-83.8311,-83.8311,-44.6361,-39.1727,-77.0608,-83.8311,-83.8311,-83.8311 0|0:45:15,23,4,3,0,0:15:584:23,4,3,0,0:847,145,122,0,0:-64.7268,0,-41.0779,-57.4059,-36.1693,-104.204,-59.1751,-37.9352,-95.3427,-106.276,-69.2422,-48.0016,-105.408,-107.179,-117.244,-69.2422,-48.0016,-105.408,-107.179,-117.244,-117.244 dDocent_Contig_13134 33 . T C 1521.18 . AB=0.6125;ABP=11.8048;AC=2;AF=0.166667;AN=12;AO=49;CIGAR=1X;DP=172;DPB=172;DPRA=1.73913;EPP=109.412;EPPR=270.101;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.97561;PAO=0;PQA=0;PQR=0;PRO=0;QA=1987;QR=4935;RO=123;RPL=0;RPP=109.412;RPPR=270.101;RPR=49;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=123;SRP=270.101;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:353:0:0:0,-2.70927,-32.128 0/0:16:16,0:16:635:0:0:0,-4.81648,-57.4797 0/0:55:55,0:55:2223:0:0:0,-16.5566,-200.229 0/0:12:12,0:12:486:0:0:0,-3.61236,-44.0916 0/1:28:12,16:12:479:16:651:-50.4943,0,-35.0313 0/1:52:19,33:19:759:33:1336:-104.845,0,-52.9762 dDocent_Contig_13135 13 . C A 844.833 . AB=0.258741;ABP=75.3067;AC=3;AF=0.25;AN=12;AO=39;CIGAR=1X;DP=203;DPB=203;DPRA=24.875;EPP=87.6977;EPPR=359.132;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.97561;PAO=0;PQA=0;PQR=0;PRO=0;QA=1541;QR=6599;RO=164;RPL=0;RPP=87.6977;RPPR=359.132;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=164;SRP=359.132;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:44:40,4:40:1593:4:161:-1.62995,0,-130.36 0/1:60:37,23:37:1500:23:895:-62.7851,0,-117.176 0/1:39:29,10:29:1173:10:403:-24.8899,0,-94.1045 0/0:56:54,2:54:2171:2:82:0,-9.078,-187.781 0/0:2:2,0:2:82:0:0:0,-0.60206,-7.77968 0/0:2:2,0:2:80:0:0:0,-0.60206,-7.59157 dDocent_Contig_13136 10 . C G 272.158 . AB=0.2;ABP=61.6401;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=192;DPB=192;DPRA=1.28205;EPP=35.5824;EPPR=387.361;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.988701;PAO=0;PQA=0;PQR=0;PRO=0;QA=581;QR=7080;RO=177;RPL=0;RPP=35.5824;RPPR=387.361;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=177;SRP=387.361;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:9,3:9:341:3:121:-7.66763,0,-27.4208 0/0:22:22,0:22:876:0:0:0,-6.62266,-79.1438 0/1:63:51,12:51:2062:12:460:-22.7701,0,-166.792 0/0:55:55,0:55:2203:0:0:0,-16.5566,-198.443 0/0:18:18,0:18:721:0:0:0,-5.41854,-65.216 0/0:22:22,0:22:877:0:0:0,-6.62266,-79.2378 dDocent_Contig_13137 12 . A G 245.211 . AB=0.153846;ABP=124.78;AC=4;AF=0.333333;AN=12;AO=18;CIGAR=1X;DP=198;DPB=198;DPRA=0.722222;EPP=42.0968;EPPR=391.704;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.388889;PAIREDR=0.441341;PAO=0;PQA=0;PQR=0;PRO=0;QA=728;QR=7149;RO=179;RPL=0;RPP=42.0968;RPPR=391.704;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=179;SRP=391.704;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:29,4:29:1150:4:163:-5.12444,0,-93.8486 0/1:26:23,3:23:923:3:123:-3.63801,0,-75.5444 0/1:26:20,6:20:808:6:240:-14.1489,0,-65.2092 0/1:32:26,5:26:1032:5:202:-8.82992,0,-83.4468 0/0:31:31,0:31:1218:0:0:0,-9.33193,-109.897 0/0:50:50,0:50:2018:0:0:0,-15.0515,-181.802 dDocent_Contig_13138 97 . G A 426.713 . AB=0.231481;ABP=70.6476;AC=3;AF=0.25;AN=12;AO=25;CIGAR=1X;DP=207;DPB=207;DPRA=1.09091;EPP=57.2971;EPPR=398.218;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.96;PAIREDR=0.659341;PAO=0;PQA=0;PQR=0;PRO=0;QA=882;QR=6077;RO=182;RPL=25;RPP=57.2971;RPPR=398.218;RPR=0;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=182;SRP=398.218;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:56:56,0:56:1834:0:0:0,-16.8577,-165.331 0/1:53:46,7:46:1541:7:249:-6.80099,0,-123.024 0/1:26:15,11:15:492:11:385:-27.1575,0,-36.7648 0/1:29:22,7:22:744:7:248:-13.9346,0,-58.5421 0/0:31:31,0:31:1069:0:0:0,-9.33193,-96.5193 0/0:12:12,0:12:397:0:0:0,-3.61236,-36.0481 dDocent_Contig_13139 14 . A G 651.991 . AB=0.190217;ABP=156.382;AC=4;AF=0.333333;AN=12;AO=36;CIGAR=1X;DP=249;DPB=249;DPRA=1.11053;EPP=81.1833;EPPR=465.534;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.333333;PAIREDR=0.492958;PAO=0;PQA=0;PQR=0;PRO=0;QA=1445;QR=8539;RO=213;RPL=0;RPP=81.1833;RPPR=465.534;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=213;SRP=465.534;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:38,0:38:1543:0:0:0,-11.4391,-139.103 0/1:50:39,11:39:1550:11:448:-25.6239,0,-124.688 0/1:33:25,8:25:994:8:327:-19.8661,0,-79.8197 0/1:68:61,7:61:2444:7:282:-5.28272,0,-199.631 0/1:33:24,9:24:955:9:347:-21.6482,0,-76.3108 0/0:27:26,1:26:1053:1:41:0,-4.03324,-90.9641 dDocent_Contig_13140 9 . C T 78.8585 . AB=0.166667;ABP=37.7539;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=136;DPB=136;DPRA=1.30508;EPP=20.3821;EPPR=280.959;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.757812;PAO=0;PQA=0;PQR=0;PRO=0;QA=287;QR=4828;RO=128;RPL=0;RPP=20.3821;RPPR=280.959;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=128;SRP=280.959;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:755:0:0:0,-6.0206,-68.2755 0/1:36:30,6:30:1147:6:221:-9.40872,0,-92.6903 0/0:11:11,0:11:406:0:0:0,-3.31133,-36.8836 0/0:24:23,1:23:864:1:34:0,-3.82581,-74.677 0/0:17:16,1:16:593:1:32:0,-1.9182,-50.5029 0/0:28:28,0:28:1063:0:0:0,-8.42884,-95.9725 dDocent_Contig_13141 38 . C T 3632.8 . AB=0.240741;ABP=97.59;AC=7;AF=0.583333;AN=12;AO=121;CIGAR=1M3D1M2X1M2X;DP=315;DPB=277.8;DPRA=0.713043;EPP=265.758;EPPR=417.762;GTI=0;LEN=1;MEANALT=1.6;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4624;QR=7415;RO=191;RPL=0;RPP=265.758;RPPR=417.762;RPR=121;RUN=1;SAF=121;SAP=265.758;SAR=0;SRF=191;SRP=417.762;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:69:51,18:51:1977:18:689:-41.5676,0,-157.385 0|1:37:27,10:27:1054:10:378:-23.2341,0,-84.0249 0|1:56:44,11:44:1689:11:427:-21.856,0,-135.33 0|0:69:69,0:69:2695:0:0:0,-20.7711,-242.714 1|1:51:0,49:0:0:49:1843:-165.731,-14.7505,0 1|1:33:0,33:0:0:33:1287:-116.113,-9.93399,0 dDocent_Contig_13142 209 . N G 189.616 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=1.69407e-21;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=193;QR=0;RO=0;RPL=5;RPP=13.8677;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:34:-3.39891,-0.30103,0 1/1:3:0,3:0:0:3:120:-11.1873,-0.90309,0 1/1:1:0,1:0:0:1:39:-3.89656,-0.30103,0 dDocent_Contig_13143 41 . C A 137.396 . AB=0.416667;ABP=3.73412;AC=1;AF=0.1;AN=10;AO=5;CIGAR=1X;DP=43;DPB=43;DPRA=1.54839;EPP=13.8677;EPPR=85.5263;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.842105;PAO=0;PQA=0;PQR=0;PRO=0;QA=203;QR=1519;RO=38;RPL=0;RPP=13.8677;RPPR=85.5263;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=38;SRP=85.5263;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:7,5:7:285:5:203:-15.0405,0,-22.4118 0/0:9:9,0:9:357:0:0:0,-2.70927,-32.4898 ./.:.:.:.:.:.:.:. 0/0:14:14,0:14:559:0:0:0,-4.21442,-50.6521 0/0:5:5,0:5:200:0:0:0,-1.50515,-18.3795 0/0:3:3,0:3:118:0:0:0,-0.90309,-11.0025 dDocent_Contig_13144 55 . T G 44.3829 . AB=0.137931;ABP=36.0317;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=348;DPB=348;DPRA=0.955056;EPP=29.068;EPPR=732.625;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0.505952;PAO=0;PQA=0;PQR=0;PRO=0;QA=476;QR=13315;RO=336;RPL=12;RPP=29.068;RPPR=732.625;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=336;SRP=732.625;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1092:0:0:0,-8.12781,-98.5649 0/0:67:65,2:65:2511:2:80:0,-12.5772,-218.535 0/1:29:25,4:25:1009:4:159:-5.96096,0,-82.3741 0/0:74:68,6:68:2719:6:237:0,-0.574205,-223.119 0/0:82:82,0:82:3251:0:0:0,-24.6845,-292.662 0/0:69:69,0:69:2733:0:0:0,-20.7711,-246.08 dDocent_Contig_13145 155 . C T 132.737 . AB=0.205882;ABP=28.557;AC=1;AF=0.125;AN=8;AO=7;CIGAR=1X;DP=84;DPB=84;DPRA=2.04;EPP=18.2106;EPPR=170.214;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=276;QR=2993;RO=77;RPL=0;RPP=18.2106;RPPR=170.214;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=170.214;SRR=77;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:11:11,0:11:430:0:0:0,-3.31133,-39.0496 0/0:23:23,0:23:874:0:0:0,-6.92369,-78.9591 0/1:34:27,7:27:1064:7:276:-14.9727,0,-85.8129 0/0:16:16,0:16:625:0:0:0,-4.81648,-56.5768 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13149 38 . C T 1444.37 . AB=0.495327;ABP=3.03059;AC=3;AF=0.25;AN=12;AO=59;CIGAR=1X;DP=193;DPB=193;DPRA=0;EPP=131.127;EPPR=293.988;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.440678;PAIREDR=0.5;PAO=0;PQA=0;PQR=0;PRO=0;QA=2241;QR=5251;RO=134;RPL=0;RPP=131.127;RPPR=293.988;RPR=59;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=134;SRP=293.988;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:25,2:25:996:2:79:0,-0.630565,-82.4416 0/1:44:18,26:18:699:26:984:-75.6088,0,-49.9898 0/1:20:14,6:14:557:6:237:-15.6824,0,-44.453 0/1:43:22,21:22:866:21:789:-58.3674,0,-65.3026 0/0:31:29,2:29:1117:2:72:0,-2.49529,-93.9722 0/0:28:26,2:26:1016:2:80:0,-0.837049,-84.1404 dDocent_Contig_13150 9 . C A 37.8323 . AB=0.119048;ABP=55.9529;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X1M1X;DP=136;DPB=136;DPRA=2.23404;EPP=13.8677;EPPR=287.473;GTI=0;LEN=1;MEANALT=1;MQM=53;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.641221;PAO=0;PQA=0;PQR=0;PRO=0;QA=196;QR=5060;RO=131;RPL=0;RPP=13.8677;RPPR=287.473;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=131;SRP=287.473;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:21:21,0:21:820:0:0:0,-6.32163,-74.1214 0|0:22:22,0:22:822:0:0:0,-6.62266,-74.2904 0|0:7:7,0:7:279:0:0:0,-2.10721,-25.4817 0|1:42:37,5:37:1449:5:196:-5.30604,0,-118.034 0|0:15:15,0:15:578:0:0:0,-4.51545,-52.3598 0|0:29:29,0:29:1112:0:0:0,-8.72987,-100.378 dDocent_Contig_13151 15 . A C 311.13 . AB=0.207792;ABP=60.1172;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=548;DPB=548;DPRA=0.543662;EPP=46.4397;EPPR=1147.38;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994307;PAO=0;PQA=0;PQR=0;PRO=0;QA=764;QR=20432;RO=527;RPL=0;RPP=46.4397;RPPR=1147.38;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=527;SRP=1147.38;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:25,7:25:936:7:267:-14.7565,0,-74.8961 0/1:45:36,9:36:1371:9:364:-19.5784,0,-110.106 0/0:103:103,0:103:4091:0:0:0,-31.0061,-368.179 0/0:116:111,4:111:4323:4:133:0,-22.4564,-376.832 0/0:94:94,0:94:3620:0:0:0,-28.2968,-325.874 0/0:158:158,0:158:6091:0:0:0,-47.5627,-548.044 dDocent_Contig_13152 15 . A G 493.946 . AB=0.195312;ABP=106.223;AC=2;AF=0.166667;AN=12;AO=30;CIGAR=1X;DP=479;DPB=479;DPRA=0.767196;EPP=68.1545;EPPR=978.001;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.566667;PAIREDR=0.501114;PAO=0;PQA=0;PQR=0;PRO=0;QA=1203;QR=17886;RO=449;RPL=0;RPP=68.1545;RPPR=978.001;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=449;SRP=978.001;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:66:59,7:59:2343:7:282:-5.8844,0,-191.163 0/1:62:44,18:44:1771:18:723:-46.7321,0,-140.94 0/0:63:60,3:60:2361:3:117:0,-8.0556,-201.744 0/0:99:97,2:97:3849:2:81:0,-22.1162,-338.734 0/0:89:89,0:89:3555:0:0:0,-26.7917,-319.988 0/0:100:100,0:100:4007:0:0:0,-30.103,-360.611 dDocent_Contig_13153 51 . A G 1119.87 . AB=0.276382;ABP=89.4436;AC=6;AF=0.5;AN=12;AO=55;CIGAR=1X;DP=199;DPB=199;DPRA=0;EPP=122.441;EPPR=315.702;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.826389;PAO=0;PQA=0;PQR=0;PRO=0;QA=1989;QR=5140;RO=144;RPL=29;RPP=3.36563;RPPR=3.9754;RPR=26;RUN=1;SAF=29;SAP=3.36563;SAR=26;SRF=68;SRP=3.9754;SRR=76;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:31,5:31:1106:5:179:-5.62272,0,-89.0019 0/1:71:49,22:49:1738:22:809:-51.7584,0,-135.307 0/1:9:8,1:8:287:1:35:-0.789359,0,-23.465 0/1:44:32,12:32:1167:12:411:-24.0647,0,-92.0875 0/1:9:8,1:8:282:1:39:-1.18729,0,-23.0091 0/1:30:16,14:16:560:14:516:-37.7479,0,-41.6899 dDocent_Contig_13154 7 . A G 395.647 . AB=0.0888889;ABP=69.0713;AC=0;AF=0;AN=12;AO=6;CIGAR=1X3M1X3M1X7M;DP=105;DPB=104.375;DPRA=0;EPP=16.0391;EPPR=161.528;GTI=0;LEN=1;MEANALT=2.75;MQM=23;MQMR=58.1644;NS=6;NUMALT=6;ODDS=0;PAIRED=0;PAIREDR=0.438356;PAO=0;PQA=0;PQR=0;PRO=0;QA=138;QR=2836;RO=73;RPL=0;RPP=16.0391;RPPR=161.528;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=73;SRP=161.528;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:25:18,0,0,0,0,0,6:18:679:0,0,0,0,0,6:0,0,0,0,0,240:-14.0493,-19.4678,-75.0986,-19.4678,-75.0986,-75.0986,-19.4678,-75.0986,-75.0986,-75.0986,-19.4678,-75.0986,-75.0986,-75.0986,-75.0986,-19.4678,-75.0986,-75.0986,-75.0986,-75.0986,-75.0986,0,-55.6223,-55.6223,-55.6223,-55.6223,-55.6223,-53.8161 0|0:19:16,2,0,0,0,0,1:16:623:2,0,0,0,0,1:46,0,0,0,0,41:0,-1.95567,-52.5412,-4.81648,-53.1433,-56.1213,-4.81648,-53.1433,-56.1213,-56.1213,-4.81648,-53.1433,-56.1213,-56.1213,-56.1213,-4.81648,-53.1433,-56.1213,-56.1213,-56.1213,-56.1213,-1.39614,-49.7906,-52.7676,-52.7676,-52.7676,-52.7676,-52.4666 0|0:18:13,1,0,0,0,3,0:13:513:1,0,0,0,3,0:23,0,0,0,116,0:-5.6863,-8.13535,-49.0388,-9.59969,-49.3398,-50.8287,-9.59969,-49.3398,-50.8287,-50.8287,-9.59969,-49.3398,-50.8287,-50.8287,-50.8287,0,-39.8108,-41.2977,-41.2977,-41.2977,-40.3946,-9.59969,-49.3398,-50.8287,-50.8287,-50.8287,-41.2977,-50.8287 0|0:16:11,0,5,0,0,0,0:11:432:0,5,0,0,0,0:0,188,0,0,0,0:-12.4632,-15.7745,-49.8464,0,-34.4482,-32.943,-15.7745,-49.8464,-34.4482,-49.8464,-15.7745,-49.8464,-34.4482,-49.8464,-49.8464,-15.7745,-49.8464,-34.4482,-49.8464,-49.8464,-49.8464,-15.7745,-49.8464,-34.4482,-49.8464,-49.8464,-49.8464,-49.8464 0|0:16:8,2,1,5,0,0,0:8:318:2,1,5,0,0,0:46,39,189,0,0,0:-13.156,-12.6111,-37.1772,-12.3506,-34.5728,-37.2457,0,-22.2887,-22.0436,-23.7482,-15.5643,-37.7793,-37.5467,-25.2534,-40.7547,-15.5643,-37.7793,-37.5467,-25.2534,-40.7547,-40.7547,-15.5643,-37.7793,-37.5467,-25.2534,-40.7547,-40.7547,-40.7547 0|0:11:7,1,0,0,2,0,0:7:271:1,0,0,2,0,0:23,0,0,74,0,0:-3.42901,-4.07714,-26.0561,-5.53622,-26.3571,-27.8399,-5.53622,-26.3571,-27.8399,-27.8399,0,-20.8507,-22.3288,-22.3288,-21.7267,-5.53622,-26.3571,-27.8399,-27.8399,-22.3288,-27.8399,-5.53622,-26.3571,-27.8399,-27.8399,-22.3288,-27.8399,-27.8399 dDocent_Contig_13156 8 . G C 66.9047 . AB=0.151515;ABP=37.8197;AC=1;AF=0.1;AN=10;AO=7;CIGAR=1X;DP=108;DPB=108;DPRA=1.67647;EPP=18.2106;EPPR=222.329;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=271;QR=3866;RO=101;RPL=0;RPP=18.2106;RPPR=222.329;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=101;SRP=222.329;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:28,5:28:1066:5:195:-7.99021,0,-86.312 0/0:15:15,0:15:571:0:0:0,-4.51545,-51.7281 0/0:35:35,0:35:1350:0:0:0,-10.536,-121.784 0/0:24:22,2:22:840:2:76:0,-0.0100457,-68.7068 ./.:.:.:.:.:.:.:. 0/0:1:1,0:1:39:0:0:0,-0.30103,-3.89656 dDocent_Contig_13157 8 . G A 2439.51 . AB=0.351449;ABP=55.9124;AC=4;AF=0.333333;AN=12;AO=101;CIGAR=1X;DP=418;DPB=418;DPRA=1.01159;EPP=222.329;EPPR=691.367;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.980198;PAIREDR=0.984227;PAO=0;PQA=0;PQR=0;PRO=0;QA=3853;QR=12120;RO=317;RPL=0;RPP=222.329;RPPR=691.367;RPR=101;RUN=1;SAF=101;SAP=222.329;SAR=0;SRF=317;SRP=691.367;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:69:33,36:33:1278:36:1372:-102.995,0,-94.5387 0/1:80:64,16:64:2441:16:609:-31.0641,0,-195.812 0/1:40:32,8:32:1223:8:300:-15.3128,0,-98.3237 0/1:87:50,37:50:1887:37:1419:-101.801,0,-143.887 0/0:73:69,4:69:2639:4:153:0,-7.83358,-223.558 0/0:69:69,0:69:2652:0:0:0,-20.7711,-238.869 dDocent_Contig_13158 98 . N T 1939.27 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=64;CIGAR=1X;DP=64;DPB=64;DPRA=0;EPP=141.985;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2133;QR=0;RO=0;RPL=64;RPP=141.985;RPPR=0;RPR=0;RUN=1;SAF=64;SAP=141.985;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:9:0,9:0:0:9:302:-27.5071,-2.70927,0 1/1:3:0,3:0:0:3:94:-8.77091,-0.90309,0 1/1:28:0,28:0:0:28:922:-83.2847,-8.42884,0 1/1:24:0,24:0:0:24:815:-73.6653,-7.22472,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13159 27 . G A 370.599 . AB=0.0756972;ABP=395.51;AC=1;AF=0.0833333;AN=12;AO=25;CIGAR=3M1X16M;DP=824;DPB=801.4;DPRA=0;EPP=57.2971;EPPR=1525.21;GTI=0;LEN=1;MEANALT=4.75;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=933;QR=26219;RO=701;RPL=0;RPP=57.2971;RPPR=1525.21;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=701;SRP=1525.21;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:105:86,12,1,0,5:86:3159:12,1,0,5:440,37,0,189:-10.0632,0,-254.608,-32.9248,-255.194,-290.852,-35.9517,-258.221,-291.153,-294.18,-20.4579,-242.729,-275.661,-278.688,-277.183 0|0:134:98,13,7,13,0:98:3603:13,7,13,0:473,272,463,0:-8.23545,-0.559423,-291.212,-15.3763,-272.772,-307.842,0,-257.391,-272.215,-290.655,-37.7364,-295.125,-309.949,-294.568,-332.302 0|0:148:113,0,16,17,0:113:4321:0,16,17,0:0,620,647,0:-19.0475,-53.0639,-407.607,-2.14413,-356.689,-351.872,0,-354.539,-303.621,-349.422,-53.0639,-407.607,-356.689,-354.539,-407.607 0|1:146:125,0,0,0,14:125:4808:0,0,0,14:0,0,0,541:-6.91563,-44.5444,-439.317,-44.5444,-439.317,-439.317,-44.5444,-439.317,-439.317,-439.317,0,-394.886,-394.886,-394.886,-390.672 0|0:93:91,0,0,0,1:91:3366:0,0,0,1:0,0,0,40:0,-27.3937,-302.806,-27.3937,-302.806,-302.806,-27.3937,-302.806,-302.806,-302.806,-23.9939,-299.51,-299.51,-299.51,-299.209 0|0:198:188,0,0,1,5:188:6962:0,0,1,5:0,0,39,163:0,-56.5936,-626.192,-56.5936,-626.192,-626.192,-53.3803,-622.986,-622.986,-622.685,-43.4383,-613.041,-613.041,-609.835,-611.536 dDocent_Contig_13160 17 . A T 417.869 . AB=0.165605;ABP=155.497;AC=4;AF=0.333333;AN=12;AO=27;CIGAR=1X;DP=212;DPB=212;DPRA=1.64348;EPP=61.6401;EPPR=404.733;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.703704;PAIREDR=0.816216;PAO=0;PQA=0;PQR=0;PRO=0;QA=1094;QR=7341;RO=185;RPL=0;RPP=61.6401;RPPR=404.733;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=185;SRP=404.733;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:25,8:25:985:8:327:-19.8661,0,-79.0128 0/1:51:45,6:45:1787:6:245:-7.07694,0,-145.689 0/1:24:18,6:18:673:6:243:-15.0235,0,-53.6496 0/1:49:43,6:43:1733:6:238:-7.04219,0,-141.436 0/0:23:23,0:23:923:0:0:0,-6.92369,-83.3714 0/0:32:31,1:31:1240:1:41:0,-5.53839,-107.779 dDocent_Contig_13161 89 . C T 145.626 . AB=0.219512;ABP=31.0276;AC=1;AF=0.1;AN=10;AO=11;CIGAR=1X;DP=198;DPB=198;DPRA=1.42857;EPP=26.8965;EPPR=409.076;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0.909091;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=383;QR=6603;RO=187;RPL=11;RPP=26.8965;RPPR=409.076;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=187;SRP=409.076;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:46:46,0:46:1612:0:0:0,-13.8474,-145.368 0/0:36:35,1:35:1203:1:36:0,-7.2388,-104.969 0/0:58:57,1:57:2060:1:34:0,-14.0608,-182.264 0/1:41:32,9:32:1130:9:313:-16.1647,0,-89.6597 ./.:.:.:.:.:.:.:. 0/0:17:17,0:17:598:0:0:0,-5.11751,-54.1492 dDocent_Contig_13162 21 . T C 9611.04 . AB=0.787037;ABP=234.875;AC=7;AF=0.583333;AN=12;AO=298;CIGAR=1X;DP=370;DPB=370;DPRA=0;EPP=650.109;EPPR=159.356;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.996644;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11979;QR=2910;RO=72;RPL=0;RPP=650.109;RPPR=159.356;RPR=298;RUN=1;SAF=298;SAP=650.109;SAR=0;SRF=72;SRP=159.356;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:46:3,43:3:122:43:1727:-144.266,-2.47489,0 0/1:97:18,79:18:727:79:3178:-256.882,0,-36.5555 0/1:26:5,21:5:201:21:855:-69.4332,0,-10.6432 0/1:129:18,111:18:727:111:4435:-360.246,0,-26.9222 0/1:34:8,26:8:318:26:1056:-85.0925,0,-18.75 0/1:38:20,18:20:815:18:728:-54.4058,0,-62.2249 dDocent_Contig_13163 23 . G A 5715.06 . AB=0.0625;ABP=109.412;AC=0;AF=0;AN=12;AO=4;CIGAR=1X2M;DP=383;DPB=383;DPRA=0;EPP=11.6962;EPPR=402.561;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.961957;PAO=0;PQA=0;PQR=0;PRO=0;QA=162;QR=7236;RO=184;RPL=0;RPP=11.6962;RPPR=402.561;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=184;SRP=402.561;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:56:41,0,15:41:1612:0,15:0,590:-36.5808,-48.9231,-181.505,0,-132.975,-128.46 0|0:79:48,0,31:48:1860:0,31:0,1226:-86.8361,-101.285,-254.071,0,-153.177,-143.845 0|0:59:23,0,36:23:909:0,36:0,1450:-112.985,-119.909,-194.709,0,-75.1974,-64.3603 0|0:38:25,0,13:25:986:0,13:0,510:-34.8064,-42.3322,-123.458,0,-81.518,-77.6046 0|0:64:14,4,45:14:553:4,45:162,1788:-142.961,-133.816,-178.116,0,-32.1391,-31.953 0|0:87:33,0,54:33:1316:0,54:0,2162:-168.558,-178.492,-286.869,0,-108.775,-92.5194 dDocent_Contig_13164 15 . C A 56.6707 . AB=0.333333;ABP=5.18177;AC=1;AF=0.1;AN=10;AO=3;CIGAR=1X;DP=178;DPB=178;DPRA=0.213018;EPP=9.52472;EPPR=383.018;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=107;QR=6996;RO=175;RPL=0;RPP=9.52472;RPPR=383.018;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=175;SRP=383.018;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:31,0:31:1245:0:0:0,-9.33193,-112.314 0/0:30:30,0:30:1192:0:0:0,-9.0309,-107.554 0/0:86:86,0:86:3443:0:0:0,-25.8886,-309.905 0/0:22:22,0:22:882:0:0:0,-6.62266,-79.6878 ./.:.:.:.:.:.:.:. 0/1:9:6,3:6:234:3:107:-7.26913,0,-18.7185 dDocent_Contig_13166 49 . T A 753.522 . AB=0.648649;ABP=10.1116;AC=2;AF=0.166667;AN=12;AO=25;CIGAR=3M1X7M;DP=78;DPB=77.7273;DPRA=2.35556;EPP=57.2971;EPPR=111.584;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=978;QR=1925;RO=50;RPL=25;RPP=57.2971;RPPR=111.584;RPR=0;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=50;SRP=111.584;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:5:5,0,0:5:187:0,0:0,0:0,-1.50515,-17.1926,-1.50515,-17.1926,-17.1926 0|0:10:10,0,0:10:387:0,0:0,0:0,-3.0103,-35.1839,-3.0103,-35.1839,-35.1839 0|0:16:15,0,1:15:582:0,1:0,41:0,-4.51545,-52.309,-0.721913,-48.9236,-48.6226 0|0:10:7,3,0:7:269:3,0:104,0:-6.68718,0,-21.5635,-8.79439,-22.4666,-30.9034 0|1:17:5,0,12:5:189:0,12:0,470:-37.5276,-39.0327,-54.5209,0,-15.8699,-12.2575 0|1:20:8,0,12:8:311:0,12:0,467:-36.3591,-38.7673,-64.3225,0,-25.9437,-22.3314 dDocent_Contig_13167 65 . C G 804.493 . AB=0.622642;ABP=9.93443;AC=2;AF=0.166667;AN=12;AO=33;CIGAR=1X;DP=172;DPB=172;DPRA=0.890756;EPP=74.6689;EPPR=304.845;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.575758;PAIREDR=0.733813;PAO=0;PQA=0;PQR=0;PRO=0;QA=1100;QR=5149;RO=139;RPL=33;RPP=74.6689;RPPR=304.845;RPR=0;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=139;SRP=304.845;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1000:0:0:0,-8.42884,-90.2919 0/0:36:36,0:36:1327:0:0:0,-10.8371,-119.705 0/0:32:32,0:32:1198:0:0:0,-9.63296,-108.112 0/0:23:23,0:23:866:0:0:0,-6.92369,-78.2588 0/1:24:14,10:14:531:10:337:-23.4291,0,-40.9074 0/1:29:6,23:6:227:23:763:-60.2421,0,-12.062 dDocent_Contig_13168 27 . C A 130.878 . AB=0.0909091;ABP=34.9902;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=1X1M1D8M4D1M;DP=153;DPB=151.938;DPRA=0.733333;EPP=7.35324;EPPR=298.331;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=80;QR=5369;RO=136;RPL=0;RPP=7.35324;RPPR=298.331;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=136;SRP=298.331;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:21:16,1,0,4:16:624:1,0,4:41,0,161:-8.44691,-9.87783,-60.8574,-13.2634,-61.1584,-64.5433,0,-47.8866,-51.2718,-50.0677 0|0:28:25,2,0,0:25:991:2,0,0:81,0,0:0,-0.64358,-81.8993,-7.52575,-82.5014,-89.182,-7.52575,-82.5014,-89.182,-89.182 0|0:4:4,0,0,0:4:153:0,0,0:0,0,0:0,-1.20412,-14.1403,-1.20412,-14.1403,-14.1403,-1.20412,-14.1403,-14.1403,-14.1403 0|1:22:15,4,2,1:15:597:4,2,1:151,80,41:-7.84532,0,-47.9499,-5.76606,-42.5637,-54.3328,-8.97314,-45.7693,-51.55,-57.8397 0|0:58:58,0,0,0:58:2300:0,0,0:0,0,0:0,-17.4597,-207.185,-17.4597,-207.185,-207.185,-17.4597,-207.185,-207.185,-207.185 0|0:20:18,0,0,2:18:704:0,0,2:0,0,78:-1.38218,-6.80072,-64.6834,-6.80072,-64.6834,-64.6834,0,-58.2724,-58.2724,-57.6704 dDocent_Contig_13169 14 . T A 794.934 . AB=0.226744;ABP=114.563;AC=4;AF=0.333333;AN=12;AO=45;CIGAR=1X;DP=306;DPB=306;DPRA=0.912727;EPP=100.727;EPPR=569.765;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.555556;PAIREDR=0.578544;PAO=0;PQA=0;PQR=0;PRO=0;QA=1753;QR=10269;RO=261;RPL=0;RPP=100.727;RPPR=569.765;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=261;SRP=569.765;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:49:44,5:44:1722:5:195:-3.17079,0,-140.463 0/0:79:73,6:73:2867:6:230:0,-2.7213,-237.093 0/1:43:34,9:34:1343:9:352:-19.0968,0,-108.188 0/0:55:55,0:55:2182:0:0:0,-16.5566,-196.566 0/1:39:28,11:28:1100:11:424:-26.7661,0,-87.5526 0/1:41:27,14:27:1055:14:552:-37.6767,0,-82.9035 dDocent_Contig_13171 33 . A G 183.14 . AB=0.257143;ABP=20.9405;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=86;DPB=86;DPRA=1.32432;EPP=24.725;EPPR=168.042;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.868421;PAO=0;PQA=0;PQR=0;PRO=0;QA=387;QR=3002;RO=76;RPL=0;RPP=24.725;RPPR=168.042;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=76;SRP=168.042;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:13,7:13:489:7:269:-18.5462,0,-38.3206 0/1:15:13,2:13:518:2:79:-2.98179,0,-42.4511 0/0:11:11,0:11:435:0:0:0,-3.31133,-39.502 0/0:14:13,1:13:517:1:39:0,-0.317855,-42.9773 0/0:7:7,0:7:277:0:0:0,-2.10721,-25.299 0/0:19:19,0:19:766:0:0:0,-5.71957,-69.2601 dDocent_Contig_13172 26 . T G 234.37 . AB=0.170213;ABP=91.8097;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X;DP=200;DPB=200;DPRA=2.15294;EPP=50.7827;EPPR=387.361;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.863636;PAIREDR=0.706215;PAO=0;PQA=0;PQR=0;PRO=0;QA=844;QR=5739;RO=177;RPL=0;RPP=50.7827;RPPR=387.361;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=177;SRP=387.361;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:29:22,7:22:690:7:252:-14.2824,0,-53.6564 0/0:32:30,2:30:929:2:82:0,-1.85328,-76.1118 0/0:17:17,0:17:622:0:0:0,-5.11751,-56.3087 0/1:65:56,9:56:1802:9:351:-12.3763,0,-142.87 0/0:29:27,2:27:920:2:79:0,-1.23224,-75.6041 0/0:28:25,2:25:776:2:80:0,-0.735875,-62.6248 dDocent_Contig_13173 30 . A C 1122.64 . AB=0.118421;ABP=99.1265;AC=0;AF=0;AN=12;AO=9;CIGAR=11M1X;DP=219;DPB=208.667;DPRA=0;EPP=22.5536;EPPR=315.702;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=358;QR=5626;RO=144;RPL=0;RPP=22.5536;RPPR=315.702;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=144;SRP=315.702;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:19:16,3,0,0:16:615:3,0,0:121,0,0:-5.56063,0,-49.9619,-10.3771,-50.865,-60.8422,-10.3771,-50.865,-60.8422,-60.8422 0|0:20:12,0,7,0:12:477:0,7,0:0,271,0:-18.6271,-22.2394,-61.5171,0,-39.2617,-37.1545,-22.2394,-61.5171,-39.2617,-61.5171 0|0:54:43,2,8,0:43:1691:2,8,0:78,306,0:-12.2241,-18.7497,-157.277,0,-132.776,-136.78,-25.1683,-157.879,-139.188,-164.291 0|0:23:18,5,0,0:18:696:5,0,0:199,0,0:-11.3649,0,-56.0455,-16.7834,-57.5506,-73.9389,-16.7834,-57.5506,-73.9389,-73.9389 0|0:27:13,2,11,0:13:514:2,11,0:82,404,0:-29.1097,-26.2475,-67.9652,0,-35.5581,-39.0179,-33.0231,-68.5673,-42.3292,-75.3378 0|0:76:42,5,18,9:42:1633:5,18,9:180,719,358:-46.5997,-44.5614,-177.25,0,-119.532,-128.796,-29.761,-149.278,-104.737,-161.252 dDocent_Contig_13175 123 . G T 129.367 . AB=0.4;ABP=4.31318;AC=1;AF=0.125;AN=8;AO=6;CIGAR=1X;DP=40;DPB=40;DPRA=1.8;EPP=16.0391;EPPR=76.8404;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=209;QR=1149;RO=34;RPL=0;RPP=16.0391;RPPR=76.8404;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=76.8404;SRR=34;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:6:6,0:6:208:0:0:0,-1.80618,-19.0596 0/1:15:9,6:9:313:6:209:-14.6356,0,-23.9915 0/0:9:9,0:9:296:0:0:0,-2.70927,-26.9598 0/0:10:10,0:10:332:0:0:0,-3.0103,-30.2021 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13177 27 . T G 113.945 . AB=0.173913;ABP=45.4956;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=117;DPB=117;DPRA=1.29577;EPP=20.3821;EPPR=239.701;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.5;PAIREDR=0.807339;PAO=0;PQA=0;PQR=0;PRO=0;QA=308;QR=4042;RO=109;RPL=0;RPP=20.3821;RPPR=239.701;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=109;SRP=239.701;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:13:13,0:13:480:0:0:0,-3.91339,-43.5414 0/0:29:29,0:29:1093:0:0:0,-8.72987,-98.6719 0/0:18:18,0:18:655:0:0:0,-5.41854,-59.276 0/0:11:11,0:11:413:0:0:0,-3.31133,-37.5178 0/1:14:11,3:11:394:3:117:-6.69487,0,-31.5825 0/1:32:27,5:27:1007:5:191:-7.92151,0,-81.2989 dDocent_Contig_13178 11 . G T 385.477 . AB=0.240506;ABP=49.2159;AC=4;AF=0.333333;AN=12;AO=19;CIGAR=1X;DP=117;DPB=117;DPRA=1.03947;EPP=44.2683;EPPR=215.815;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.842105;PAIREDR=0.55102;PAO=0;PQA=0;PQR=0;PRO=0;QA=756;QR=3928;RO=98;RPL=0;RPP=44.2683;RPPR=215.815;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=98;SRP=215.815;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:4:2,2:2:81:2:82:-6.57556,0,-6.48161 0/1:31:27,4:27:1073:4:150:-4.52779,0,-87.5252 0/1:16:11,5:11:441:5:204:-13.9276,0,-35.2298 0/1:28:20,8:20:793:8:320:-20.7385,0,-63.2608 0/0:21:21,0:21:850:0:0:0,-6.32163,-76.8118 0/0:17:17,0:17:690:0:0:0,-5.11751,-62.4281 dDocent_Contig_13181 57 . A G 983.508 . AB=0.12;ABP=128.435;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=15M1X5M;DP=156;DPB=144.667;DPRA=0;EPP=29.068;EPPR=183.243;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.963855;PAO=0;PQA=0;PQR=0;PRO=0;QA=475;QR=3155;RO=83;RPL=12;RPP=29.068;RPPR=183.243;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=83;SRP=183.243;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:21:11,2,3,0,1:11:428:2,3,0,1:65,118,0,40:-6.40104,-4.48033,-39.0504,0,-29.9454,-34.2807,-9.71237,-39.6525,-35.1838,-44.8919,-6.41508,-36.3569,-31.8878,-41.5961,-41.2951 0|0:19:3,15,0,1,0:3:116:15,0,1,0:535,0,39,0:-42.6757,0,-5.01034,-43.5788,-9.52579,-53.1114,-40.3708,-6.31908,-49.9041,-49.603,-43.5788,-9.52579,-53.1114,-49.9041,-53.1114 0|0:32:8,14,4,5,0:8:295:14,4,5,0:504,150,202,0:-38.6948,0,-19.8989,-28.8162,-11.8284,-51.7335,-24.4413,-7.4507,-36.277,-47.0599,-41.103,-24.1133,-52.9376,-48.565,-65.2244 0|0:35:23,7,1,0,4:23:879:7,1,0,4:255,38,0,154:-13.8945,0,-70.0146,-17.7063,-69.0107,-89.5354,-20.8182,-72.1218,-89.8365,-92.9477,-8.16832,-59.4778,-77.192,-80.3033,-79.0992 0|1:19:15,1,0,2,1:15:569:1,0,2,1:37,0,79,41:-1.98801,-3.48388,-49.821,-6.50346,-50.122,-53.1483,0,-43.6195,-46.6459,-46.0438,-3.11359,-46.7363,-49.7627,-43.26,-49.4617 0|1:30:23,2,0,4,0:23:868:2,0,4,0:69,0,155,0:-5.84127,-7.16761,-77.7081,-12.765,-78.3101,-83.9125,0,-65.576,-71.1782,-69.9741,-12.765,-78.3101,-83.9125,-71.1782,-83.9125 dDocent_Contig_13182 21 . A T 240.374 . AB=0.2;ABP=42.0968;AC=5;AF=0.5;AN=10;AO=14;CIGAR=1X;DP=99;DPB=99;DPRA=0;EPP=33.4109;EPPR=187.585;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=556;QR=3336;RO=85;RPL=0;RPP=33.4109;RPPR=187.585;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=85;SRP=187.585;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:47:45,2:45:1765:2:80:0,-6.55683,-151.485 0/1:16:12,4:12:471:4:155:-9.50879,0,-37.9228 0/1:21:17,4:17:665:4:159:-8.37012,0,-53.8596 0/1:13:11,2:11:435:2:82:-3.86629,0,-35.5877 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:80:-7.59179,-0.60206,0 dDocent_Contig_13183 34 . C T 663.394 . AB=0.173077;ABP=196.104;AC=1;AF=0.0833333;AN=12;AO=50;CIGAR=1X;DP=823;DPB=823;DPRA=3.13568;EPP=111.584;EPPR=1681.56;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992238;PAO=0;PQA=0;PQR=0;PRO=0;QA=2013;QR=30803;RO=773;RPL=0;RPP=111.584;RPPR=1681.56;RPR=50;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=773;SRP=1681.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:237:233,4:233:9321:4:164:0,-56.1942,-823.16 0/1:208:172,36:172:6825:36:1447:-67.8622,0,-551.313 0/0:179:169,10:169:6713:10:402:0,-17.3448,-567.34 0/0:83:83,0:83:3331:0:0:0,-24.9855,-299.841 0/0:3:3,0:3:122:0:0:0,-0.90309,-11.3725 0/0:113:113,0:113:4491:0:0:0,-34.0164,-404.121 dDocent_Contig_13184 13 . A G 40.4282 . AB=0.147059;ABP=39.7976;AC=2;AF=0.2;AN=10;AO=8;CIGAR=1X;DP=101;DPB=101;DPRA=2.87719;EPP=20.3821;EPPR=204.957;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.978495;PAO=0;PQA=0;PQR=0;PRO=0;QA=309;QR=3725;RO=93;RPL=0;RPP=20.3821;RPPR=204.957;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=93;SRP=204.957;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:20,3:20:793:3:106:-2.9594,0,-64.7626 0/0:48:45,3:45:1815:3:122:0,-3.07695,-152.181 0/0:17:17,0:17:676:0:0:0,-5.11751,-61.1696 0/1:11:9,2:9:359:2:81:-4.3744,0,-29.3609 ./.:.:.:.:.:.:.:. 0/0:2:2,0:2:82:0:0:0,-0.60206,-7.77968 dDocent_Contig_13185 159 . A G 2581.51 . AB=0.163793;ABP=116.9;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1M1D1X12M;DP=192;DPB=184.933;DPRA=0;EPP=44.2683;EPPR=181.071;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0.894737;PAIREDR=0.804878;PAO=0;PQA=0;PQR=0;PRO=0;QA=773;QR=3231;RO=82;RPL=19;RPP=44.2683;RPPR=181.071;RPR=0;RUN=1;SAF=0;SAP=44.2683;SAR=19;SRF=0;SRP=181.071;SRR=82;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:28:17,0,0,11,0:17:677:0,0,11,0:0,0,444,0:-31.887,-37.0045,-92.7498,-37.0045,-92.7498,-92.7498,0,-56.1464,-56.1464,-52.8351,-37.0045,-92.7498,-92.7498,-56.1464,-92.7498 0|0:54:27,8,0,17,0:27:1057:8,0,17,0:328,0,677,0:-47.6204,-28.6694,-113.172,-55.7482,-115.58,-142.656,0,-59.8328,-86.9106,-81.7931,-55.7482,-115.58,-142.656,-86.9106,-142.656 0|1:36:20,10,0,6,0:20:784:10,0,6,0:404,0,239,0:-27.288,0,-61.4532,-33.3086,-64.4635,-97.7716,-13.63,-44.7814,-78.0905,-76.2843,-33.3086,-64.4635,-97.7716,-78.0905,-97.7716 0|0:26:18,1,0,3,4:18:713:1,0,3,4:41,0,123,163:-8.02755,-10.0618,-68.4376,-13.4461,-68.7387,-72.1231,-3.2931,-58.585,-61.9696,-61.0665,0,-55.2898,-58.6745,-48.5204,-57.4703 0|0:27:0,0,3,24,0:0:0:0,3,24,0:0,122,961,0:-89.6314,-89.6314,-89.6314,-79.5675,-79.5675,-78.6644,-10.4694,-10.4694,0,-3.24468,-89.6314,-89.6314,-79.5675,-10.4694,-89.6314 0|0:21:0,0,3,17,0:0:0:0,3,17,0:0,121,668,0:-64.9143,-64.9143,-64.9143,-54.9386,-54.9386,-54.0355,-9.98415,-9.98415,0,-4.86664,-64.9143,-64.9143,-54.9386,-9.98415,-64.9143 dDocent_Contig_13186 120 . C G 128.723 . AB=0.111111;ABP=14.8328;AC=3;AF=0.25;AN=12;AO=7;CIGAR=1X;DP=90;DPB=90;DPRA=0.698113;EPP=18.2106;EPPR=183.243;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=241;QR=2921;RO=83;RPL=0;RPP=18.2106;RPPR=183.243;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=183.243;SRR=83;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:22,2:22:755:2:72:0,-0.387997,-61.4243 0/1:9:8,1:8:294:1:35:-0.789359,0,-24.1032 0/0:41:41,0:41:1484:0:0:0,-12.3422,-133.851 0/0:11:11,0:11:353:0:0:0,-3.31133,-32.0749 1/1:4:0,4:0:0:4:134:-12.3901,-1.20412,0 0/0:1:1,0:1:35:0:0:0,-0.30103,-3.49863 dDocent_Contig_13187 1 . N G 148.758 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=7.37776;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=161;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:161:-14.8755,-1.20412,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13188 7 . A T 1650.75 . AB=0.0736544;ABP=560.341;AC=4;AF=0.333333;AN=12;AO=26;CIGAR=1X3M;DP=353;DPB=353;DPRA=0;EPP=59.4686;EPPR=452.505;GTI=0;LEN=1;MEANALT=3.16667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=5.55112e-17;PAIRED=0.923077;PAIREDR=0.826087;PAO=0;PQA=0;PQR=0;PRO=0;QA=1009;QR=7935;RO=207;RPL=0;RPP=59.4686;RPPR=452.505;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=207;SRP=452.505;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:46:33,10,1,2:33:1251:10,1,2:379,39,80:-21.1265,0,-99.5407,-27.8541,-99.3449,-130.118,-24.4673,-95.9597,-123.828,-126.432 0|1:60:31,19,1,9:31:1190:19,1,9:733,39,354:-46.7711,0,-91.9682,-52.8964,-94.4817,-150.286,-28.5171,-70.1074,-123.005,-123.502 0|0:55:27,7,9,12:27:1028:7,9,12:268,347,485:-31.8563,-18.001,-100.205,-11.4927,-73.8183,-93.0947,0,-62.3315,-55.8224,-80.7057 0|0:65:31,13,8,13:31:1193:13,8,13:504,312,514:-32.9476,-1.39657,-95.429,-16.6323,-73.6951,-112.172,0,-57.0642,-72.3023,-94.0368 0|1:45:28,9,3,4:28:1074:9,3,4:345,117,163:-19.879,0,-85.4328,-18.6904,-78.5241,-105.936,-14.8554,-74.6922,-93.3898,-101.804 0|1:82:57,13,4,8:57:2199:13,4,8:501,155,327:-23.7137,0,-176.663,-28.1389,-167.842,-207.518,-14.0355,-153.744,-181.891,-192.217 dDocent_Contig_13189 25 . C T 263.356 . AB=0.163265;ABP=99.53;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=244;DPB=244;DPRA=1.34247;EPP=37.7539;EPPR=498.106;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.570175;PAO=0;PQA=0;PQR=0;PRO=0;QA=648;QR=9114;RO=228;RPL=0;RPP=37.7539;RPPR=498.106;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=228;SRP=498.106;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:800:0:0:0,-6.0206,-72.3152 0/0:57:57,0:57:2278:0:0:0,-17.1587,-205.186 0/0:33:33,0:33:1309:0:0:0,-9.93399,-118.077 0/0:36:36,0:36:1442:0:0:0,-10.8371,-130.024 0/1:45:38,7:38:1533:7:284:-12.3876,0,-124.659 0/1:53:44,9:44:1752:9:364:-17.1698,0,-141.941 dDocent_Contig_13190 29 . G A 8926.45 . AB=0.421833;ABP=42.3895;AC=4;AF=0.333333;AN=12;AO=315;CIGAR=1X;DP=1584;DPB=1584;DPRA=0;EPP=687.024;EPPR=2758.61;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993696;PAO=0;PQA=0;PQR=0;PRO=0;QA=12557;QR=49730;RO=1269;RPL=0;RPP=687.024;RPPR=2758.61;RPR=315;RUN=1;SAF=315;SAP=687.024;SAR=0;SRF=1269;SRP=2758.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:117:51,66:51:1983:66:2626:-201.249,0,-143.444 0/1:206:102,104:102:4033:104:4129:-309.57,0,-300.948 0/1:150:90,60:90:3522:60:2391:-170.189,0,-271.883 0/1:269:186,83:186:7384:83:3331:-218.858,0,-583.235 0/0:452:451,1:451:17589:1:39:0,-132.169,-1577.79 0/0:390:389,1:389:15219:1:41:0,-113.307,-1364.53 dDocent_Contig_13191 21 . T C 232.551 . AB=0.28;ABP=13.5202;AC=4;AF=0.333333;AN=12;AO=10;CIGAR=1X;DP=78;DPB=78;DPRA=0.71875;EPP=24.725;EPPR=150.67;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.9;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=401;QR=2533;RO=68;RPL=0;RPP=24.725;RPPR=150.67;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=68;SRP=150.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:7:6,1:6:212:1:40:-1.88847,0,-17.3143 0/1:18:12,6:12:439:6:242:-16.7384,0,-34.4233 0/0:5:5,0:5:193:0:0:0,-1.50515,-17.7407 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 0/0:19:18,1:18:684:1:38:0,-1.9223,-58.0952 0/0:27:27,0:27:1005:0:0:0,-8.12781,-90.7518 dDocent_Contig_13192 39 . A G 41.9698 . AB=0.111111;ABP=73.9451;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=372;DPB=372;DPRA=0.841584;EPP=24.725;EPPR=789.083;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.762431;PAO=0;PQA=0;PQR=0;PRO=0;QA=400;QR=14341;RO=362;RPL=0;RPP=24.725;RPPR=789.083;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=362;SRP=789.083;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:49:48,1:48:1911:1:41:0,-10.6559,-168.104 0/0:90:90,0:90:3540:0:0:0,-27.0927,-318.659 0/1:54:48,6:48:1926:6:240:-5.71983,0,-157.283 0/0:67:64,3:64:2538:3:119:0,-9.07451,-217.475 0/0:54:54,0:54:2113:0:0:0,-16.2556,-190.364 0/0:58:58,0:58:2313:0:0:0,-17.4597,-208.327 dDocent_Contig_13193 13 . C A 39.9378 . AB=0.148148;ABP=32.0437;AC=2;AF=0.166667;AN=12;AO=4;CIGAR=1X;DP=208;DPB=208;DPRA=0.298343;EPP=11.6962;EPPR=445.991;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.97549;PAO=0;PQA=0;PQR=0;PRO=0;QA=161;QR=8059;RO=204;RPL=0;RPP=11.6962;RPPR=445.991;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=204;SRP=445.991;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:37,0:37:1465:0:0:0,-11.1381,-132.109 0/0:68:68,0:68:2682:0:0:0,-20.47,-241.527 0/0:26:26,0:26:1037:0:0:0,-7.82678,-93.6258 0/0:50:50,0:50:1963:0:0:0,-15.0515,-176.88 0/1:7:5,2:5:200:2:80:-5.48436,0,-16.2727 0/1:20:18,2:18:712:2:81:-1.66513,0,-58.3897 dDocent_Contig_13194 125 . A T 993.469 . AB=0.179811;ABP=285.295;AC=1;AF=0.0833333;AN=12;AO=74;CIGAR=1X;DP=637;DPB=637;DPRA=14.9867;EPP=163.699;EPPR=1223.38;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2828;QR=21396;RO=562;RPL=0;RPP=163.699;RPPR=1223.38;RPR=74;RUN=1;SAF=0;SAP=163.699;SAR=74;SRF=0;SRP=1223.38;SRR=562;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:699:0:0:0,-5.41854,-63.2441 0/0:2:2,0:2:77:0:0:0,-0.60206,-7.30914 0/0:19:19,0:19:734:0:0:0,-5.71957,-66.3914 0/0:36:36,0:36:1393:0:0:0,-10.8371,-125.65 0/0:245:228,17:228:8704:17:649:0,-15.0085,-724.368 0/1:317:259,57:259:9789:57:2179:-100.87,0,-785.213 dDocent_Contig_13195 52 . A C 34798.5 . AB=0.699387;ABP=565.861;AC=6;AF=0.5;AN=12;AO=1140;CIGAR=1X;DP=1630;DPB=1630;DPRA=0;EPP=2478.49;EPPR=1064.86;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.9974;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997955;PAO=0;PQA=0;PQR=0;PRO=0;QA=44262;QR=19249;RO=489;RPL=1140;RPP=2478.49;RPPR=1064.86;RPR=0;RUN=1;SAF=1140;SAP=2478.49;SAR=0;SRF=489;SRP=1064.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:138:74,64:74:2934:64:2510:-184.515,0,-222.617 0/1:290:87,202:87:3442:202:7749:-609.693,0,-222.428 0/1:235:116,119:116:4581:119:4664:-348.973,0,-341.487 0/1:304:131,173:131:5166:173:6754:-516.108,0,-373.314 0/1:332:47,285:47:1791:285:11070:-895.741,0,-61.4628 0/1:331:34,297:34:1335:297:11515:-936.044,0,-20.7715 dDocent_Contig_13196 26 . C T 2892.53 . AB=0.42562;ABP=14.6393;AC=5;AF=0.416667;AN=12;AO=103;CIGAR=1X;DP=243;DPB=243;DPRA=48.4;EPP=226.672;EPPR=307.016;GTI=0;LEN=1;MEANALT=1;MQM=59.301;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4127;QR=5595;RO=140;RPL=0;RPP=226.672;RPPR=307.016;RPR=103;RUN=1;SAF=103;SAP=226.672;SAR=0;SRF=140;SRP=307.016;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:11,25:11:447:25:997:-77.6137,0,-29.7486 0/1:55:30,25:30:1195:25:995:-73.2205,0,-91.2663 0/1:83:52,31:52:2064:31:1249:-87.6657,0,-160.955 0/1:55:35,20:35:1405:20:807:-56.3885,0,-110.147 0/0:1:1,0:1:41:0:0:0,-0.30103,-4.09457 0/1:13:11,2:11:443:2:79:-3.58424,0,-36.3114 dDocent_Contig_13197 24 . T G 3092.14 . AB=0.217949;ABP=56.9074;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=7M1X4M;DP=302;DPB=310;DPRA=0;EPP=39.9253;EPPR=328.731;GTI=0;LEN=1;MEANALT=4.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=2.77556e-17;PAIRED=0;PAIREDR=0.793333;PAO=0;PQA=0;PQR=0;PRO=0;QA=660;QR=5963;RO=150;RPL=0;RPP=39.9253;RPPR=328.731;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=150;SRP=328.731;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:33:3,5,13,10:3:121:5,13,10:199,497,399:-62.7503,-47.2661,-55.7365,-22.8817,-16.471,-28.943,-30.7922,-24.3801,0,-37.758 0|0:63:26,1,35,0:26:1026:1,35,0:41,1319,0:-100.238,-104.679,-188.805,0,-81.0348,-73.8834,-108.064,-189.106,-84.4194,-192.491 0|0:56:31,0,21,0:31:1234:0,21,0:0,793,0:-55.7084,-65.0403,-166.667,0,-101.679,-95.3578,-65.0403,-166.667,-101.679,-166.667 0|0:45:22,7,8,7:22:880:7,8,7:272,292,261:-17.2245,-1.49469,-71.8953,0,-50.1553,-70.0932,-2.49433,-52.6514,-51.1517,-72.8909 0|0:39:20,3,16,0:20:788:3,16,0:113,614,0:-44.3814,-41.1436,-105.072,0,-55.5833,-60.0241,-50.402,-105.975,-64.8406,-115.233 0|0:66:48,0,18,0:48:1914:0,18,0:0,663,0:-40.1315,-54.581,-212.228,0,-158.024,-152.605,-54.581,-212.228,-158.024,-212.228 dDocent_Contig_13198 19 . A C 799.067 . AB=0.138824;ABP=484.561;AC=2;AF=0.166667;AN=12;AO=71;CIGAR=1X;DP=1014;DPB=1014;DPRA=50.5;EPP=157.185;EPPR=2050.71;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2809;QR=37173;RO=943;RPL=0;RPP=157.185;RPPR=2050.71;RPR=71;RUN=1;SAF=71;SAP=157.185;SAR=0;SRF=943;SRP=2050.71;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:220:212,8:212:8396:8:320:0,-37.0591,-726.034 0/0:329:328,1:328:12941:1:40:0,-95.0432,-1159.82 0/1:196:164,32:164:6430:32:1270:-55.5695,0,-519.475 0/1:229:202,27:202:7931:27:1069:-27.5588,0,-644.499 0/0:4:4,0:4:160:0:0:0,-1.20412,-14.7834 0/0:36:33,3:33:1315:3:110:0,-0.580809,-108.36 dDocent_Contig_13199 16 . G T 311.333 . AB=0.25;ABP=33.4109;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=157;DPB=157;DPRA=2.13158;EPP=37.7539;EPPR=309.188;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.93617;PAO=0;PQA=0;PQR=0;PRO=0;QA=616;QR=5351;RO=141;RPL=0;RPP=37.7539;RPPR=309.188;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=141;SRP=309.188;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:56:42,14:42:1600:14:543:-32.3548,0,-127.412 0/0:25:23,2:23:870:2:73:0,-0.595676,-71.6869 0/0:42:42,0:42:1579:0:0:0,-12.6433,-142.378 0/0:26:26,0:26:997:0:0:0,-7.82678,-90.0393 0/0:4:4,0:4:157:0:0:0,-1.20412,-14.509 0/0:4:4,0:4:148:0:0:0,-1.20412,-13.6805 dDocent_Contig_13200 94 . G A 42.058 . AB=0.3;ABP=6.48466;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=44;DPB=44;DPRA=1.38462;EPP=11.6962;EPPR=89.8692;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=40;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=120;QR=1315;RO=40;RPL=4;RPP=11.6962;RPPR=89.8692;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=40;SRP=89.8692;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:8:8,0:8:268:0:0:0,-2.40824,-23.7614 0/0:8:7,1:7:231:1:24:0,-0.0189717,-18.1675 0/0:7:7,0:7:237:0:0:0,-2.10721,-21.0291 0/1:10:7,3:7:237:3:96:-5.72777,0,-18.0422 0/0:2:2,0:2:59:0:0:0,-0.60206,-5.48147 0/0:9:9,0:9:283:0:0:0,-2.70927,-25.0765 dDocent_Contig_13201 7 . A T 291.27 . AB=0.147651;ABP=163.685;AC=1;AF=0.0833333;AN=12;AO=22;CIGAR=1X;DP=384;DPB=384;DPRA=3.17021;EPP=50.7827;EPPR=786.912;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.99723;PAO=0;PQA=0;PQR=0;PRO=0;QA=832;QR=13616;RO=361;RPL=0;RPP=50.7827;RPPR=786.912;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=361;SRP=786.912;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:149:127,22:127:4775:22:832:-30.3488,0,-384.947 0/0:78:78,0:78:2938:0:0:0,-23.4803,-264.596 0/0:68:68,0:68:2594:0:0:0,-20.47,-233.658 0/0:68:67,0:67:2549:0:0:0,-20.169,-229.497 0/0:17:17,0:17:615:0:0:0,-5.11751,-55.676 0/0:4:4,0:4:145:0:0:0,-1.20412,-13.4042 dDocent_Contig_13202 14 . C T 413.545 . AB=0.178295;ABP=118.974;AC=2;AF=0.166667;AN=12;AO=32;CIGAR=1X;DP=395;DPB=395;DPRA=1.04297;EPP=72.4974;EPPR=791.255;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.96875;PAIREDR=0.977961;PAO=0;PQA=0;PQR=0;PRO=0;QA=1287;QR=14428;RO=363;RPL=0;RPP=72.4974;RPPR=791.255;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=363;SRP=791.255;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:51:47,4:47:1886:4:164:0,-0.202631,-154.788 0/1:77:67,10:67:2671:10:406:-13.7207,0,-217.335 0/1:52:39,13:39:1571:13:513:-30.8552,0,-125.969 0/0:87:82,5:82:3188:5:204:0,-7.44558,-268.246 0/0:43:43,0:43:1720:0:0:0,-12.9443,-155.024 0/0:85:85,0:85:3392:0:0:0,-25.5875,-305.33 dDocent_Contig_13203 8 . G A 3157.46 . AB=0.210526;ABP=127.47;AC=4;AF=0.333333;AN=12;AO=36;CIGAR=1X4M;DP=201;DPB=201;DPRA=0;EPP=81.1833;EPPR=133.299;GTI=0;LEN=1;MEANALT=2.8;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0.916667;PAIREDR=0.9;PAO=0;PQA=0;PQR=0;PRO=0;QA=1367;QR=2355;RO=60;RPL=0;RPP=81.1833;RPPR=133.299;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=60;SRP=133.299;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:34:17,3,9,2,3:17:665:3,9,2,3:116,347,76,122:-23.3742,-18.9646,-72.7398,0,-45.1495,-51.9671,-22.2603,-67.4111,-48.4449,-76.3362,-18.4246,-63.5779,-44.6111,-66.8733,-72.2022 1|0:30:8,0,9,13,0:8:315:0,9,13,0:0,346,506,0:-41.6557,-44.064,-69.9801,-15.6599,-41.5761,-38.8669,-2.48224,-28.4011,0,-24.4877,-44.064,-69.9801,-41.5761,-28.4011,-69.9801 0|0:30:19,0,0,6,5:19:750:0,0,6,5:0,0,238,198:-13.8721,-19.5917,-81.305,-19.5917,-81.305,-81.305,0,-61.7134,-61.7134,-59.9072,-3.29574,-65.0086,-65.0086,-45.4168,-63.5035 0|0:32:14,0,5,8,5:14:549:0,5,8,5:0,186,311,205:-21.3381,-25.5525,-70.7028,-10.3356,-55.4825,-53.9774,0,-45.1501,-29.9315,-42.7419,-8.62444,-53.7789,-38.5586,-28.2249,-52.2738 1|0:29:0,0,6,22,1:0:0:0,6,22,1:0,215,869,41:-89.0175,-89.0175,-89.0175,-71.4921,-71.4921,-69.6859,-17.4891,-17.4891,0,-10.8664,-85.6326,-85.6326,-68.1074,-14.0976,-85.3316 1|0:46:2,0,7,37,0:2:76:0,7,37,0:0,273,1482,0:-137.71,-138.312,-144.543,-115.872,-122.104,-119.996,-16.2186,-22.4489,0,-11.3108,-138.312,-144.543,-122.104,-22.4489,-144.543 dDocent_Contig_13205 52 . G T 104.704 . AB=0.2;ABP=26.4622;AC=2;AF=0.25;AN=8;AO=6;CIGAR=1X;DP=44;DPB=44;DPRA=2.14286;EPP=16.0391;EPPR=85.5263;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=241;QR=1503;RO=38;RPL=6;RPP=16.0391;RPPR=85.5263;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=38;SRP=85.5263;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:8:8,0:8:311:0:0:0,-2.40824,-28.35 0/0:6:6,0:6:244:0:0:0,-1.80618,-22.3388 0/1:21:16,5:16:622:5:201:-12.1489,0,-49.9802 0/1:9:8,1:8:326:1:40:-1.28641,0,-27.0006 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13206 12 . T G 5613.08 . AB=0.0926518;ABP=454.128;AC=8;AF=0.666667;AN=12;AO=29;CIGAR=4M1X3M;DP=355;DPB=354.75;DPRA=0;EPP=65.983;EPPR=178.9;GTI=0;LEN=1;MEANALT=5.4;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=0.517241;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1156;QR=3143;RO=81;RPL=0;RPP=65.983;RPPR=178.9;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=81;SRP=178.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:58:14,29,1,4,3,5:14:540:29,1,4,3,5:1127,37,160,117,203:-87.5309,0,-35.6077,-88.7187,-41.3112,-132.759,-78.5638,-31.1557,-119.879,-121.701,-82.1275,-34.7199,-123.442,-113.287,-125.566,-75.0006,-27.5919,-116.316,-106.161,-109.724,-117.837 0|1:103:25,58,7,1,2,3:25:972:58,7,1,2,3:2257,277,39,77,119:-177.413,0,-62.4155,-162.366,-57.3019,-240.133,-181.733,-76.6693,-239.034,-261.306,-178.616,-73.553,-235.918,-255.285,-257.889,-175.143,-70.079,-232.444,-251.811,-248.695,-254.114 0|1:42:13,21,4,0,2,0:13:509:21,4,0,2,0:803,157,0,77,0:-61.1049,0,-35.5317,-52.1041,-28.9406,-92.7577,-65.0183,-41.8533,-93.9618,-106.875,-58.6957,-35.5316,-87.6394,-100.553,-99.9507,-65.0183,-41.8533,-93.9618,-106.875,-100.553,-106.875 0|1:65:29,22,9,0,0,4:29:1122:22,9,0,0,4:862,354,0,0,163:-62.153,0,-85.531,-41.7622,-63.0322,-131.208,-70.8829,-92.1537,-133.917,-163.038,-70.8829,-92.1537,-133.917,-163.038,-163.038,-57.4336,-78.7044,-120.468,-149.589,-149.589,-148.385 1|1:35:0,14,6,4,2,9:0:0:14,6,4,2,9:549,227,155,74,350:-73.9168,-28.7643,-24.5498,-55.3096,-10.1574,-53.5034,-61.1826,-16.0293,-42.5757,-59.9785,-67.8643,-22.7121,-49.2574,-55.1302,-67.2622,-45.1557,0,-26.5491,-32.4214,-39.1035,-42.4465 1|1:52:0,25,11,0,8,8:0:0:25,11,0,8,8:939,436,0,312,321:-110.411,-35.8892,-28.3635,-74.518,0,-71.2066,-110.411,-35.8892,-74.518,-110.411,-84.7623,-10.2447,-48.8678,-84.7623,-82.3541,-83.9583,-9.43792,-48.063,-83.9583,-58.3084,-81.55 dDocent_Contig_13207 8 . G T 618.281 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=18;CIGAR=1X;DP=382;DPB=382;DPRA=0.247253;EPP=42.0968;EPPR=793.426;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=678;QR=13889;RO=364;RPL=0;RPP=42.0968;RPPR=793.426;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=364;SRP=793.426;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:70:70,0:70:2698:0:0:0,-21.0721,-243.005 0/0:106:106,0:106:4041:0:0:0,-31.9092,-363.786 0/0:67:67,0:67:2556:0:0:0,-20.169,-230.24 0/0:97:97,0:97:3705:0:0:0,-29.1999,-333.566 1/1:18:0,18:0:0:18:678:-61.351,-5.41854,0 0/0:24:24,0:24:889:0:0:0,-7.22472,-80.321 dDocent_Contig_13208 31 . A G 152.874 . AB=0.0869565;ABP=37.093;AC=0;AF=0;AN=12;AO=2;CIGAR=1X1M1X;DP=149;DPB=149;DPRA=0.958333;EPP=3.0103;EPPR=293.988;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.686567;PAO=0;PQA=0;PQR=0;PRO=0;QA=76;QR=5290;RO=134;RPL=0;RPP=7.35324;RPPR=293.988;RPR=2;RUN=1;SAF=1;SAP=3.0103;SAR=1;SRF=134;SRP=293.988;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:24:21,0,3:21:829:0,3:0,105:-2.56889,-8.89052,-77.1392,0,-68.604,-67.7009 0|0:30:26,0,4:26:1026:0,4:0,146:-4.46527,-12.2921,-96.7331,0,-84.8097,-83.6056 0|0:23:15,2,6:15:595:2,6:76,220:-13.4558,-11.7361,-60.1329,0,-42.7623,-47.186 0|0:20:20,0,0:20:780:0,0:0,0:0,-6.0206,-70.5176,-6.0206,-70.5176,-70.5176 0|0:20:20,0,0:20:789:0,0:0,0:0,-6.0206,-71.3301,-6.0206,-71.3301,-71.3301 0|0:32:32,0,0:32:1271:0,0:0,0:0,-9.63296,-114.666,-9.63296,-114.666,-114.666 dDocent_Contig_13209 54 . G T 638.737 . AB=0.230159;ABP=82.6999;AC=3;AF=0.3;AN=10;AO=29;CIGAR=1X;DP=149;DPB=149;DPRA=3.65217;EPP=65.983;EPPR=263.587;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.925;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.991667;PAO=0;PQA=0;PQR=0;PRO=0;QA=1178;QR=4703;RO=120;RPL=29;RPP=65.983;RPPR=263.587;RPR=0;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=120;SRP=263.587;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:51:35,16:35:1382:16:652:-43.6602,0,-109.287 0/0:22:22,0:22:887:0:0:0,-6.62266,-80.1115 0/1:27:23,4:23:916:4:162:-6.83915,0,-74.6168 0/1:48:39,9:39:1477:9:364:-18.6749,0,-118.719 ./.:.:.:.:.:.:.:. 0/0:1:1,0:1:41:0:0:0,-0.30103,-4.09457 dDocent_Contig_13210 12 . A G 47.2723 . AB=0.138889;ABP=43.7857;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=2X;DP=148;DPB=148;DPRA=2.35294;EPP=18.2106;EPPR=309.188;GTI=0;LEN=1;MEANALT=1;MQM=42.8571;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.397163;PAO=0;PQA=0;PQR=0;PRO=0;QA=275;QR=5579;RO=141;RPL=0;RPP=18.2106;RPPR=309.188;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=141;SRP=309.188;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:14:14,0:14:558:0:0:0,-4.21442,-50.5614 0|1:36:31,5:31:1217:5:196:-6.2501,0,-98.967 0|0:16:16,0:16:627:0:0:0,-4.81648,-56.762 0|0:15:15,0:15:607:0:0:0,-4.51545,-54.9683 0|0:23:23,0:23:899:0:0:0,-6.92369,-81.2216 0|0:44:42,2:42:1671:2:79:0,-5.99192,-143.369 dDocent_Contig_13211 10 . G T 4249 . AB=0.582996;ABP=17.7886;AC=6;AF=0.5;AN=12;AO=144;CIGAR=1X;DP=247;DPB=247;DPRA=0;EPP=315.702;EPPR=226.672;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.416667;PAIREDR=0.621359;PAO=0;PQA=0;PQR=0;PRO=0;QA=5652;QR=4075;RO=103;RPL=0;RPP=315.702;RPPR=226.672;RPR=144;RUN=1;SAF=144;SAP=315.702;SAR=0;SRF=103;SRP=226.672;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:10,27:10:396:27:1087:-86.9799,0,-24.8583 0/1:69:27,42:27:1035:42:1616:-124.902,0,-72.6619 0/1:31:13,18:13:520:18:724:-56.154,0,-37.8146 0/1:34:11,23:11:431:23:886:-69.7997,0,-28.905 0/1:20:8,12:8:325:12:470:-36.6258,0,-23.5988 0/1:56:34,22:34:1368:22:869:-61.6608,0,-106.52 dDocent_Contig_13212 45 . C T 2215.11 . AB=0.25;ABP=122.441;AC=3;AF=0.25;AN=12;AO=55;CIGAR=1X2M1X;DP=316;DPB=316;DPRA=0;EPP=7.78754;EPPR=7.00778;GTI=0;LEN=1;MEANALT=2.25;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.709091;PAIREDR=0.738636;PAO=0;PQA=0;PQR=0;PRO=0;QA=2007;QR=6187;RO=176;RPL=0;RPP=122.441;RPPR=385.189;RPR=55;RUN=1;SAF=33;SAP=7.78754;SAR=22;SRF=97;SRP=7.00778;SRR=79;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:59:38,7,14:38:1355:7,14:251,465:-26.153,-17.1123,-125.444,0,-89.9479,-106.205 0|1:69:29,21,17:29:1036:21,17:751,549:-52.5147,0,-78.138,-16.9987,-40.2111,-96.3222 0|1:34:22,6,6:22:745:6,6:240,210:-13.1727,0,-58.5691,-2.73852,-43.2911,-61.2685 0|1:58:29,21,8:29:1001:21,8:765,301:-53.7377,0,-74.9534,-37.804,-56.608,-116.684 0|0:40:15,0,25:15:541:0,25:0,891:-68.4547,-72.9702,-117.111,0,-44.4993,-36.9735 0|0:56:43,0,11:43:1509:0,11:0,388:-18.7003,-31.6446,-154.422,0,-122.838,-119.527 dDocent_Contig_13214 15 . A T 1536.83 . AB=0.548387;ABP=4.90158;AC=2;AF=0.166667;AN=12;AO=51;CIGAR=1X;DP=161;DPB=161;DPRA=2.73529;EPP=113.755;EPPR=241.872;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2048;QR=4347;RO=110;RPL=0;RPP=113.755;RPPR=241.872;RPR=51;RUN=1;SAF=51;SAP=113.755;SAR=0;SRF=110;SRP=241.872;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:690:0:0:0,-5.41854,-62.4172 0/0:26:26,0:26:1035:0:0:0,-7.82678,-93.4458 0/0:4:4,0:4:148:0:0:0,-1.20412,-13.6782 0/0:20:20,0:20:803:0:0:0,-6.0206,-72.588 0/1:54:17,37:17:669:37:1480:-117.184,0,-44.284 0/1:39:25,14:25:1002:14:568:-39.7209,0,-78.7341 dDocent_Contig_13215 98 . N T 1500.61 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=48;CIGAR=1X;DP=48;DPB=48;DPRA=0;EPP=107.241;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1646;QR=0;RO=0;RPL=48;RPP=107.241;RPPR=0;RPR=0;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:24:0,24:0:0:24:820:-74.116,-7.22472,0 1/1:17:0,17:0:0:17:585:-52.9749,-5.11751,0 1/1:2:0,2:0:0:2:68:-6.45788,-0.60206,0 1/1:5:0,5:0:0:5:173:-15.9102,-1.50515,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13217 7 . A G 1137.71 . AB=0.321839;ABP=26.9963;AC=4;AF=0.333333;AN=12;AO=45;CIGAR=1X3M;DP=122;DPB=122;DPRA=1.325;EPP=100.727;EPPR=113.755;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1368;QR=1951;RO=51;RPL=0;RPP=100.727;RPPR=113.755;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=51;SRP=113.755;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:19:12,0,0,4,3:12:466:0,0,4,3:0,0,122,109:-6.1239,-9.73626,-48.0649,-9.73626,-48.0649,-48.0649,0,-38.3118,-38.3118,-37.1077,-0.814404,-39.1686,-39.1686,-29.4199,-38.2655 0|0:21:10,0,5,3,3:10:382:0,5,3,3:0,191,88,122:-12.6759,-15.6862,-47.0374,0,-31.3628,-29.8577,-8.69969,-40.0374,-24.3673,-39.1343,-5.60726,-36.9685,-21.2912,-29.9701,-36.0654 0|0:16:15,0,0,0,1:15:570:0,0,0,1:0,0,0,41:0,-4.51545,-51.232,-4.51545,-51.232,-51.232,-4.51545,-51.232,-51.232,-51.232,-0.721913,-47.846,-47.846,-47.846,-47.545 0|1:42:14,6,0,20,2:14:533:6,0,20,2:199,0,631,70:-46.5144,-34.6313,-76.5677,-50.7288,-78.3739,-94.467,0,-27.6644,-43.7468,-37.7262,-45.0339,-72.6808,-88.7739,-38.0555,-88.1718 0|0:5:0,1,2,1,1:0:0:1,2,1,1:36,77,17,41:-9.78329,-6.84135,-6.54032,-3.43226,-0.471478,-2.8302,-8.59727,-5.66814,-2.27486,-8.29624,-6.38228,-3.43319,0,-5.20493,-6.08125 1|1:19:0,0,1,17,0:0:0:0,1,17,0:0,39,510,0:-45.8512,-45.8512,-45.8512,-42.6405,-42.6405,-42.3395,-5.11751,-5.11751,-1.85179,0,-45.8512,-45.8512,-42.6405,-5.11751,-45.8512 dDocent_Contig_13218 8 . G A 112.976 . AB=0.214286;ABP=22.8638;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=259;DPB=259;DPRA=0.561765;EPP=35.5824;EPPR=532.85;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.922131;PAO=0;PQA=0;PQR=0;PRO=0;QA=573;QR=9281;RO=244;RPL=0;RPP=35.5824;RPPR=532.85;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=244;SRP=532.85;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:13,1:13:495:1:39:0,-0.317855,-40.9997 0/0:60:57,3:57:2140:3:113:0,-7.52239,-182.289 0/1:28:22,6:22:834:6:232:-12.8201,0,-66.9539 0/0:48:45,3:45:1715:3:115:0,-3.72455,-143.885 0/0:68:68,0:68:2612:0:0:0,-20.47,-235.272 0/0:41:39,2:39:1485:2:74:0,-5.3168,-126.901 dDocent_Contig_13219 83 . T G 4876.66 . AB=0.492788;ABP=3.19822;AC=5;AF=0.416667;AN=12;AO=205;CIGAR=1X2M1X;DP=420;DPB=420;DPRA=20.8;EPP=448.162;EPPR=469.877;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=1;PAIREDR=0.962791;PAO=0;PQA=0;PQR=0;PRO=0;QA=6896;QR=7038;RO=215;RPL=205;RPP=448.162;RPPR=469.877;RPR=0;RUN=1;SAF=205;SAP=448.162;SAR=0;SRF=0;SRP=469.877;SRR=215;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:129:65,64:65:2098:64:2151:-155.029,0,-150.253 0|1:148:74,74:74:2458:74:2484:-179.269,0,-176.931 0|1:40:21,19:21:683:19:640:-45.8761,0,-49.735 0|1:89:45,44:45:1482:44:1486:-107.24,0,-106.876 0|0:4:4,0:4:119:0:0:0,-1.20412,-11.0053 0|1:10:6,4:6:198:4:135:-9.47328,0,-15.1344 dDocent_Contig_13220 135 . T A 241.336 . AB=0.45;ABP=3.44459;AC=1;AF=0.125;AN=8;AO=9;CIGAR=1X;DP=43;DPB=43;DPRA=2.6087;EPP=22.5536;EPPR=76.8404;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=350;QR=1335;RO=34;RPL=0;RPP=22.5536;RPPR=76.8404;RPR=9;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=76.8404;SRR=34;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:11:11,0:11:430:0:0:0,-3.31133,-39.0477 0/0:6:6,0:6:244:0:0:0,-1.80618,-22.3388 0/0:6:6,0:6:246:0:0:0,-1.80618,-22.5201 0/1:20:11,9:11:415:9:350:-25.8326,0,-31.6727 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13221 90 . A T 235.986 . AB=0.304348;ABP=18.305;AC=3;AF=0.25;AN=12;AO=14;CIGAR=1X;DP=76;DPB=76;DPRA=1.53333;EPP=33.4109;EPPR=137.642;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.285714;PAIREDR=0.725806;PAO=0;PQA=0;PQR=0;PRO=0;QA=463;QR=2179;RO=62;RPL=14;RPP=33.4109;RPPR=137.642;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=62;SRP=137.642;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:14:6,8:6:209:8:259:-19.4132,0,-14.9366 0/1:11:9,2:9:313:2:69:-3.24133,0,-25.1957 0/1:21:17,4:17:599:4:135:-6.16175,0,-47.9176 0/0:14:14,0:14:493:0:0:0,-4.21442,-44.7032 0/0:5:5,0:5:178:0:0:0,-1.50515,-16.3687 0/0:11:11,0:11:387:0:0:0,-3.31133,-35.1665 dDocent_Contig_13222 29 . T C 104.228 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=3;CIGAR=9M1X2M;DP=215;DPB=216.75;DPRA=1.24444;EPP=9.52472;EPPR=424.276;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0.35567;PAO=0;PQA=0;PQR=0;PRO=0;QA=122;QR=7571;RO=194;RPL=0;RPP=9.52472;RPPR=424.276;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=194;SRP=424.276;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:28:28,0,0,0:28:1083:0,0,0:0,0,0:0,-8.42884,-97.769,-8.42884,-97.769,-97.769,-8.42884,-97.769,-97.769,-97.769 0|0:59:53,4,0,0:53:2062:4,0,0:151,0,0:0,-3.49586,-171.875,-15.9546,-173.08,-185.453,-15.9546,-173.08,-185.453,-185.453 0|0:8:8,0,0,0:8:316:0,0,0:0,0,0:0,-2.40824,-28.8064,-2.40824,-28.8064,-28.8064,-2.40824,-28.8064,-28.8064,-28.8064 0|0:42:39,0,0,3:39:1507:0,0,3:0,0,122:0,-11.7402,-135.483,-11.7402,-135.483,-135.483,-1.27077,-125.418,-125.418,-124.515 0|0:38:26,5,6,0:26:1020:5,6,0:196,240,0:-11.9456,-3.65802,-86.0317,0,-67.7657,-82.0776,-19.7724,-87.5368,-83.8838,-103.655 0|0:40:40,0,0,0:40:1583:0,0,0:0,0,0:0,-12.0412,-142.722,-12.0412,-142.722,-142.722,-12.0412,-142.722,-142.722,-142.722 dDocent_Contig_13223 15 . A T 262.867 . AB=0.104439;ABP=523.534;AC=4;AF=0.333333;AN=12;AO=40;CIGAR=1X;DP=508;DPB=508;DPRA=1.532;EPP=89.8692;EPPR=1019.26;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.6;PAIREDR=0.553419;PAO=0;PQA=0;PQR=0;PRO=0;QA=1618;QR=18719;RO=468;RPL=0;RPP=89.8692;RPPR=1019.26;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=468;SRP=1019.26;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:66:59,7:59:2304:7:286:-6.24684,0,-187.652 0/1:109:94,15:94:3778:15:607:-22.156,0,-307.208 0/1:89:81,8:81:3231:8:328:-3.09867,0,-264.06 0/1:119:109,10:109:4380:10:397:-0.264233,0,-358.318 0/0:42:42,0:42:1686:0:0:0,-12.6433,-151.964 0/0:83:83,0:83:3340:0:0:0,-24.9855,-300.644 dDocent_Contig_13224 138 . T C 42.2979 . AB=0.173913;ABP=24.253;AC=1;AF=0.125;AN=8;AO=4;CIGAR=1X;DP=49;DPB=49;DPRA=2.65385;EPP=11.6962;EPPR=100.727;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.955556;PAO=0;PQA=0;PQR=0;PRO=0;QA=139;QR=1637;RO=45;RPL=0;RPP=11.6962;RPPR=100.727;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=100.727;SRR=45;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:320:0:0:0,-2.70927,-29.1403 0/0:7:7,0:7:249:0:0:0,-2.10721,-22.7548 0/1:23:19,4:19:699:4:139:-5.92873,0,-56.3184 0/0:10:10,0:10:369:0:0:0,-3.0103,-33.5597 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13226 9 . A C 284.609 . AB=0.205128;ABP=61.9184;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=132;DPB=132;DPRA=2.88889;EPP=37.7539;EPPR=213.344;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=58.5776;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.939655;PAO=0;PQA=0;PQR=0;PRO=0;QA=605;QR=4406;RO=116;RPL=0;RPP=37.7539;RPPR=254.901;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=111;SRP=213.344;SRR=5;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:554:0:0:0,-4.51545,-50.1906 0/0:26:26,0:26:983:0:0:0,-7.82678,-84.8043 0/0:3:3,0:3:116:0:0:0,-0.90309,-10.8177 0/0:10:10,0:10:387:0:0:0,-3.0103,-35.1877 0/1:40:33,7:33:1266:7:256:-11.351,0,-102.189 0/1:38:29,9:29:1100:9:349:-20.3316,0,-87.865 dDocent_Contig_13227 62 . A G 722.299 . AB=0.236486;ABP=92.2754;AC=2;AF=0.166667;AN=12;AO=39;CIGAR=1X;DP=343;DPB=343;DPRA=0.965812;EPP=87.6977;EPPR=663.138;GTI=0;LEN=1;MEANALT=1;MQM=59.8974;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.820513;PAIREDR=0.707237;PAO=0;PQA=0;PQR=0;PRO=0;QA=1481;QR=11524;RO=304;RPL=17;RPP=4.40227;RPPR=23.8393;RPR=22;RUN=1;SAF=17;SAP=4.40227;SAR=22;SRF=125;SRP=23.8393;SRR=179;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:46:46,0:46:1720:0:0:0,-13.8474,-155.052 0/0:71:71,0:71:2713:0:0:0,-21.3731,-244.358 0/0:28:26,2:26:988:2:77:0,-1.1197,-81.9193 0/0:50:48,2:48:1796:2:78:0,-7.65291,-154.492 0/1:74:62,12:62:2330:12:464:-19.8353,0,-187.628 0/1:74:51,23:51:1977:23:862:-55.6164,0,-155.884 dDocent_Contig_13228 22 . A T 1453.95 . AB=0.395683;ABP=16.1485;AC=6;AF=0.5;AN=12;AO=55;CIGAR=1X;DP=139;DPB=139;DPRA=0;EPP=122.441;EPPR=185.414;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.836364;PAIREDR=0.666667;PAO=0;PQA=0;PQR=0;PRO=0;QA=2181;QR=3351;RO=84;RPL=0;RPP=122.441;RPPR=185.414;RPR=55;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=84;SRP=185.414;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:16,7:16:644:7:275:-18.1941,0,-51.3699 0/1:42:22,20:22:875:20:793:-59.0439,0,-66.4156 0/1:32:17,15:17:670:15:605:-45.1549,0,-50.9957 0/1:32:24,8:24:961:8:313:-18.9006,0,-77.1571 0/1:6:2,4:2:79:4:154:-12.4241,0,-5.69145 0/1:4:3,1:3:122:1:41:-2.89045,0,-10.1684 dDocent_Contig_13230 9 . A T 356.915 . AB=0.175182;ABP=128.559;AC=2;AF=0.166667;AN=12;AO=28;CIGAR=1X;DP=360;DPB=360;DPRA=1.59302;EPP=63.8115;EPPR=723.939;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1037;QR=12475;RO=332;RPL=0;RPP=63.8115;RPPR=723.939;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=332;SRP=723.939;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:60:58,2:58:2180:2:78:0,-10.6583,-189.024 0/0:37:37,0:37:1376:0:0:0,-11.1381,-124.117 0/1:82:73,9:73:2751:9:343:-6.54309,0,-223.095 0/1:55:40,15:40:1531:15:540:-32.3703,0,-121.506 0/0:49:49,0:49:1819:0:0:0,-14.7505,-163.957 0/0:77:75,2:75:2818:2:76:0,-15.9646,-246.585 dDocent_Contig_13231 86 . A T 171.397 . AB=0.5;ABP=3.0103;AC=1;AF=0.25;AN=4;AO=3;CIGAR=4M1X11M1X;DP=7;DPB=10;DPRA=6;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=0;NS=2;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0;PAO=4.33333;PQA=155.667;PQR=155.667;PRO=4.33333;QA=95;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 0|0:1:0,1,0:0:0:1,0:34,0:-3.39891,-0.30103,0,-3.39891,-0.30103,-3.39891 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 0|1:6:0,3,3:0:0:3,3:97,95:-15.4374,-7.67981,-6.77672,-7.86623,0,-6.96314 dDocent_Contig_13234 64 . A G 88.2253 . AB=0.217391;ABP=18.9659;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=244;DPB=244;DPRA=1.14035;EPP=16.0391;EPPR=519.821;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.966387;PAO=0;PQA=0;PQR=0;PRO=0;QA=239;QR=9117;RO=238;RPL=6;RPP=16.0391;RPPR=519.821;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=238;SRP=519.821;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:11:8,3:8:323:3:120:-7.87657,0,-26.1273 0/0:24:24,0:24:944:0:0:0,-7.22472,-85.2603 0/1:12:10,2:10:395:2:82:-4.16732,0,-32.2962 0/0:27:27,0:27:1034:0:0:0,-8.12781,-93.352 0/0:107:106,1:106:4019:1:37:0,-28.5124,-358.05 0/0:63:63,0:63:2402:0:0:0,-18.9649,-216.349 dDocent_Contig_13235 114 . A G 291.218 . AB=0.214286;ABP=12.937;AC=5;AF=0.416667;AN=12;AO=12;CIGAR=1X;DP=76;DPB=76;DPRA=0.5;EPP=29.068;EPPR=141.985;GTI=0;LEN=1;MEANALT=1;MQM=48.6667;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=0.166667;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=412;QR=2208;RO=64;RPL=0;RPP=29.068;RPPR=141.985;RPR=12;RUN=1;SAF=0;SAP=29.068;SAR=12;SRF=0;SRP=141.985;SRR=64;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:796:0:0:0,-6.92369,-71.9591 0/1:14:11,3:11:382:3:105:-5.58174,0,-30.4998 0/0:15:15,0:15:516:0:0:0,-4.51545,-46.7671 0/0:16:15,1:15:514:1:35:0,-1.31785,-43.0876 1/1:7:0,7:0:0:7:237:-21.3254,-2.10721,0 1/1:1:0,1:0:0:1:35:-3.43613,-0.30103,0 dDocent_Contig_13236 13 . G A 221.646 . AB=0.285714;ABP=16.9698;AC=1;AF=0.125;AN=8;AO=13;CIGAR=1X;DP=160;DPB=160;DPRA=0.860465;EPP=31.2394;EPPR=322.217;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=0.923077;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=492;QR=5482;RO=147;RPL=0;RPP=31.2394;RPPR=322.217;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=147;SRP=322.217;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:25,10:25:920:10:375:-23.5624,0,-72.5772 0/0:39:36,3:36:1337:3:117:0,-0.829958,-109.711 0/0:48:48,0:48:1805:0:0:0,-14.4494,-162.708 0/0:38:38,0:38:1420:0:0:0,-11.4391,-128.084 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13237 14 . A T 36.9646 . AB=0.333333;ABP=4.45795;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=287;DPB=287;DPRA=0.290598;EPP=20.3821;EPPR=608.851;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0;PAIREDR=0.702509;PAO=0;PQA=0;PQR=0;PRO=0;QA=289;QR=10708;RO=279;RPL=0;RPP=20.3821;RPPR=608.851;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=279;SRP=608.851;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:32,1:32:1205:1:36:0,-6.33571,-105.134 0/0:75:72,3:72:2795:3:102:0,-13.0623,-242.199 0/0:23:22,1:22:819:1:37:0,-3.22586,-70.3215 0/0:117:117,0:117:4514:0:0:0,-35.2205,-406.276 0/0:33:32,1:32:1218:1:40:0,-5.93831,-105.911 0/1:6:4,2:4:157:2:74:-5.21925,0,-12.7028 dDocent_Contig_13238 8 . G A 32.973 . AB=0.148148;ABP=32.0437;AC=2;AF=0.166667;AN=12;AO=4;CIGAR=1X;DP=97;DPB=97;DPRA=0.771429;EPP=11.6962;EPPR=204.957;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.989247;PAO=0;PQA=0;PQR=0;PRO=0;QA=154;QR=3583;RO=93;RPL=0;RPP=11.6962;RPPR=204.957;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=93;SRP=204.957;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:5:5,0:5:189:0:0:0,-1.50515,-17.3746 0/0:6:6,0:6:226:0:0:0,-1.80618,-20.7009 0/1:16:14,2:14:538:2:76:-2.39819,0,-43.9485 0/1:11:9,2:9:347:2:78:-4.09214,0,-28.2785 0/0:36:36,0:36:1391:0:0:0,-10.8371,-125.472 0/0:23:23,0:23:892:0:0:0,-6.92369,-80.5989 dDocent_Contig_13239 13 . T G 902.192 . AB=0.377778;ABP=14.688;AC=2;AF=0.166667;AN=12;AO=35;CIGAR=1X;DP=278;DPB=278;DPRA=0.716049;EPP=79.0118;EPPR=530.678;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.90535;PAO=0;PQA=0;PQR=0;PRO=0;QA=1357;QR=9099;RO=243;RPL=0;RPP=79.0118;RPPR=530.678;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=243;SRP=530.678;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:20,15:20:752:15:583:-42.2679,0,-57.4692 0/0:50:50,0:50:1866:0:0:0,-15.0515,-168.188 0/0:26:25,1:25:942:1:25:0,-5.32692,-82.5879 0/1:55:36,19:36:1339:19:749:-51.1732,0,-104.233 0/0:36:36,0:36:1365:0:0:0,-10.8371,-123.135 0/0:76:76,0:76:2835:0:0:0,-22.8783,-255.331 dDocent_Contig_13240 37 . C T 35.4765 . AB=0.222222;ABP=9.04217;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=1X;DP=268;DPB=268;DPRA=0.173745;EPP=7.35324;EPPR=529.682;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.973684;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=10421;RO=266;RPL=0;RPP=7.35324;RPPR=580.622;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=260;SRP=529.682;SRR=6;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:64:64,0:64:2476:0:0:0,-19.2659,-223.016 0/0:54:54,0:54:2095:0:0:0,-16.2556,-188.752 0/0:64:64,0:64:2512:0:0:0,-19.2659,-226.232 0/0:58:58,0:58:2311:0:0:0,-17.4597,-208.162 0/1:9:7,2:7:277:2:82:-5.07041,0,-22.5892 0/0:19:19,0:19:750:0:0:0,-5.71957,-67.8231 dDocent_Contig_13241 11 . G A 30.8152 . AB=0.133333;ABP=38.0434;AC=2;AF=0.166667;AN=12;AO=4;CIGAR=1X;DP=85;DPB=85;DPRA=1.09091;EPP=11.6962;EPPR=178.9;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.740741;PAO=0;PQA=0;PQR=0;PRO=0;QA=161;QR=3183;RO=81;RPL=0;RPP=11.6962;RPPR=178.9;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=81;SRP=178.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:6:6,0:6:241:0:0:0,-1.80618,-22.0663 0/0:23:23,0:23:904:0:0:0,-6.92369,-81.6651 0/1:12:10,2:10:388:2:82:-4.16732,0,-31.6581 0/0:13:13,0:13:515:0:0:0,-3.91339,-46.6952 0/0:13:13,0:13:506:0:0:0,-3.91339,-45.8836 0/1:18:16,2:16:629:2:79:-2.0787,0,-51.5261 dDocent_Contig_13242 7 . A T 2705.19 . AB=0.55814;ABP=8.06024;AC=7;AF=0.583333;AN=12;AO=99;CIGAR=1X;DP=175;DPB=175;DPRA=0;EPP=69.3608;EPPR=168.042;GTI=0;LEN=1;MEANALT=1;MQM=57.404;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.222222;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3664;QR=2913;RO=76;RPL=0;RPP=217.986;RPPR=168.042;RPR=99;RUN=1;SAF=77;SAP=69.3608;SAR=22;SRF=76;SRP=168.042;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:18:7,11:7:272:11:410:-31.7836,0,-19.4287 0/1:49:25,24:25:962:24:892:-65.6917,0,-72.1433 0/1:32:21,11:21:801:11:413:-27.851,0,-62.7799 0/1:67:22,45:22:839:45:1648:-128.339,0,-55.6621 1/1:3:0,3:0:0:3:117:-10.9104,-0.90309,0 0/1:6:1,5:1:39:5:184:-15.1099,0,-2.09038 dDocent_Contig_13243 112 . C A 2466 . AB=0.37037;ABP=26.6552;AC=7;AF=0.583333;AN=12;AO=103;CIGAR=1X;DP=228;DPB=228;DPRA=0;EPP=226.672;EPPR=274.444;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.961165;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3400;QR=4118;RO=125;RPL=0;RPP=226.672;RPPR=274.444;RPR=103;RUN=1;SAF=0;SAP=226.672;SAR=103;SRF=0;SRP=274.444;SRR=125;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:22,2:22:734:2:70:0,-0.577324,-59.7256 0/1:64:37,27:37:1200:27:897:-61.7713,0,-89.0275 0/1:85:54,31:54:1804:31:1016:-66.1496,0,-137.056 0/1:13:11,2:11:373:2:68:-2.54449,0,-29.9846 1/1:7:0,7:0:0:7:237:-21.6615,-2.10721,0 1/1:35:1,34:1:7:34:1112:-99.6743,-9.83605,0 dDocent_Contig_13244 46 . T C 519.82 . AB=0.338462;ABP=17.7429;AC=4;AF=0.333333;AN=12;AO=25;CIGAR=1X;DP=121;DPB=121;DPRA=0;EPP=57.2971;EPPR=211.472;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=981;QR=3332;RO=96;RPL=0;RPP=57.2971;RPPR=211.472;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=96;SRP=211.472;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:27,1:27:924:1:41:0,-4.33427,-79.3672 0/0:28:26,2:26:918:2:81:0,-0.743106,-75.2389 0/1:19:16,3:16:578:3:112:-4.72565,0,-46.632 0/1:19:16,3:16:528:3:114:-4.91052,0,-42.1095 0/1:10:4,6:4:142:6:234:-18.4163,0,-10.1167 0/1:17:7,10:7:242:10:399:-31.151,0,-16.9965 dDocent_Contig_13245 15 . T C 190.51 . AB=0;ABP=0;AC=2;AF=0.2;AN=10;AO=8;CIGAR=1X;DP=224;DPB=224;DPRA=0.442197;EPP=20.3821;EPPR=469.877;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0.25;PAIREDR=0.995349;PAO=0;PQA=0;PQR=0;PRO=0;QA=321;QR=8600;RO=215;RPL=0;RPP=20.3821;RPPR=469.877;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=215;SRP=469.877;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:79:79,0:79:3166:0:0:0,-23.7814,-285.014 0/0:46:42,3:42:1692:3:118:0,-2.94947,-141.492 0/0:34:34,0:34:1372:0:0:0,-10.235,-123.735 0/0:60:60,0:60:2370:0:0:0,-18.0618,-213.468 1/1:5:0,5:0:0:5:203:-18.6531,-1.50515,0 ./.:.:.:.:.:.:.:. dDocent_Contig_13246 67 . G A 2727.46 . AB=0.502326;ABP=3.0204;AC=4;AF=0.5;AN=8;AO=108;CIGAR=2X3M1X;DP=215;DPB=215;DPRA=0;EPP=237.529;EPPR=235.358;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3818;QR=3565;RO=107;RPL=108;RPP=237.529;RPPR=235.358;RPR=0;RUN=1;SAF=108;SAP=237.529;SAR=0;SRF=0;SRP=235.358;SRR=107;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:34:17,17:17:570:17:586:-42.8279,0,-41.384 0|1:52:26,26:26:874:26:896:-65.2987,0,-63.3171 0|1:59:30,29:30:997:29:1040:-76.1489,0,-72.2718 0|1:70:34,36:34:1124:36:1296:-95.8686,0,-80.3878 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_13248 10 . A T 601.295 . AB=0.375;ABP=11.6962;AC=5;AF=0.416667;AN=12;AO=24;CIGAR=1X;DP=80;DPB=80;DPRA=0.8;EPP=55.1256;EPPR=124.613;GTI=0;LEN=1;MEANALT=1;MQM=59.5833;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.803571;PAO=0;PQA=0;PQR=0;PRO=0;QA=964;QR=2217;RO=56;RPL=0;RPP=55.1256;RPPR=124.613;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=56;SRP=124.613;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:18:9,9:9:349:9:361:-27.4355,0,-26.3504 0/1:13:8,5:8:318:5:200:-14.4663,0,-25.0704 0/0:16:16,0:16:645:0:0:0,-4.81648,-58.3841 0/1:16:13,3:13:501:3:123:-6.64831,0,-40.6138 0/1:4:2,2:2:79:2:77:-6.10408,0,-6.29312 0/1:13:8,5:8:325:5:203:-14.6971,0,-25.7062 dDocent_Contig_13249 12 . G T 14156.1 . AB=0.77208;ABP=228.701;AC=7;AF=0.583333;AN=12;AO=430;CIGAR=1X;DP=512;DPB=512;DPRA=0;EPP=936.743;EPPR=181.071;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.988372;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=17084;QR=3189;RO=82;RPL=0;RPP=936.743;RPPR=181.071;RPR=430;RUN=1;SAF=430;SAP=936.743;SAR=0;SRF=82;SRP=181.071;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:23,11:23:906:11:437:-29.4482,0,-71.613 0/1:86:13,73:13:481:73:2918:-236.824,0,-17.7241 0/1:40:12,28:12:465:28:1131:-90.0304,0,-30.1548 0/1:95:20,75:20:775:75:2964:-238.256,0,-41.4642 0/1:96:12,84:12:481:84:3325:-270.403,0,-14.7416 1/1:161:2,159:2:81:159:6309:-559.867,-40.7801,0 dDocent_Contig_13250 24 . A G 199.496 . AB=0.192308;ABP=45.7716;AC=7;AF=0.583333;AN=12;AO=12;CIGAR=1X;DP=54;DPB=54;DPRA=0;EPP=29.068;EPPR=94.2121;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=456;QR=1650;RO=42;RPL=0;RPP=29.068;RPPR=94.2121;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=42;SRP=94.2121;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:15:10,5:10:375:5:183:-12.3078,0,-29.5681 0/1:15:13,2:13:520:2:82:-3.26423,0,-42.627 0/1:8:7,1:7:275:1:41:-1.68633,0,-22.7093 1/1:2:0,2:0:0:2:79:-7.49724,-0.60206,0 0/1:7:6,1:6:242:1:30:-0.892356,0,-20.0497 0/1:7:6,1:6:238:1:41:-1.98736,0,-19.6846 dDocent_Contig_13251 56 . A G 407.927 . AB=0.222222;ABP=9.04217;AC=1;AF=0.1;AN=10;AO=2;CIGAR=2X3M1X3M1X;DP=103;DPB=103;DPRA=0.339623;EPP=7.35324;EPPR=178.9;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=5;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=79;QR=3103;RO=81;RPL=2;RPP=7.35324;RPPR=178.9;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=81;SRP=178.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:10:6,4,0,0:6:222:4,0,0:151,0,0:-10.947,0,-17.322,-12.7532,-18.5262,-30.9052,-12.7532,-18.5262,-30.9052,-30.9052 0|0:31:26,5,0,0:26:999:5,0,0:192,0,0:-8.31791,0,-80.8875,-16.1447,-82.3926,-98.1536,-16.1447,-82.3926,-98.1536,-98.1536 0|0:20:20,0,0,0:20:765:0,0,0:0,0,0:0,-6.0206,-69.1752,-6.0206,-69.1752,-69.1752,-6.0206,-69.1752,-69.1752,-69.1752 0|0:33:29,2,0,0:29:1117:2,0,0:80,0,0:0,-2.13743,-93.2407,-8.72987,-93.8428,-100.434,-8.72987,-93.8428,-100.434,-100.434 .:.:.:.:.:.:.:. 1|0:9:0,0,2,6:0:0:0,2,6:0,79,246:-26.8286,-26.8286,-26.8286,-20.33,-20.33,-19.7279,-6.51088,-6.51088,0,-4.7047 dDocent_Contig_13252 73 . C A 739.741 . AB=0.154472;ABP=130.562;AC=4;AF=0.333333;AN=12;AO=37;CIGAR=1X;DP=243;DPB=243;DPRA=1.28676;EPP=83.3548;EPPR=450.334;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995146;PAO=0;PQA=0;PQR=0;PRO=0;QA=1293;QR=7253;RO=206;RPL=37;RPP=83.3548;RPPR=450.334;RPR=0;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=206;SRP=450.334;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:600:0:0:0,-5.11751,-54.3299 0/0:35:34,1:34:1202:1:35:0,-7.03742,-104.988 0/1:12:5,7:5:182:7:246:-18.8698,0,-13.1229 0/1:111:99,12:99:3467:12:427:-5.35381,0,-278.834 0/0:51:51,0:51:1802:0:0:0,-15.3525,-162.461 1/1:17:0,17:0:0:17:585:-52.9724,-5.11751,0 dDocent_Contig_13253 81 . G C 63.0719 . AB=0.162162;ABP=39.6906;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=240;DPB=240;DPRA=0.91133;EPP=16.0391;EPPR=511.135;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.74359;PAO=0;PQA=0;PQR=0;PRO=0;QA=207;QR=8069;RO=234;RPL=3;RPP=3.0103;RPPR=11.3621;RPR=3;RUN=1;SAF=3;SAP=3.0103;SAR=3;SRF=132;SRP=11.3621;SRR=102;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:13:13,0:13:454:0:0:0,-3.91339,-41.1933 0/0:27:27,0:27:912:0:0:0,-8.12781,-82.3868 0/1:37:31,6:31:1054:6:207:-7.83007,0,-84.0285 0/0:41:41,0:41:1413:0:0:0,-12.3422,-127.467 0/0:71:71,0:71:2465:0:0:0,-21.3731,-222.109 0/0:51:51,0:51:1771:0:0:0,-15.3525,-159.677 dDocent_Contig_13254 7 . A T 101.609 . AB=0.4;ABP=3.87889;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=2X;DP=459;DPB=459;DPRA=1.13488;EPP=20.3821;EPPR=973.658;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=308;QR=17013;RO=447;RPL=0;RPP=20.3821;RPPR=973.658;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=447;SRP=973.658;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:121:119,2:119:4509:2:75:0,-29.3045,-398.762 0|0:113:109,2:109:4164:2:78:0,-26.3955,-367.454 0|0:114:113,0:113:4305:0:0:0,-34.0164,-387.134 0|0:100:100,0:100:3804:0:0:0,-30.103,-342.479 0|0:1:0,0:0:0:0:0:0,0,0 0|1:10:6,4:6:231:4:155:-11.3151,0,-18.1476 dDocent_Contig_13255 147 . C T 1794.11 . AB=0;ABP=0;AC=4;AF=0.333333;AN=12;AO=53;CIGAR=1X;DP=113;DPB=113;DPRA=2.22857;EPP=118.098;EPPR=133.299;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.916667;PAO=0;PQA=0;PQR=0;PRO=0;QA=2016;QR=2308;RO=60;RPL=0;RPP=118.098;RPPR=133.299;RPR=53;RUN=1;SAF=0;SAP=118.098;SAR=53;SRF=0;SRP=133.299;SRR=60;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:271:0:0:0,-2.10721,-24.7547 0/0:26:25,1:25:944:1:38:0,-4.02951,-81.4654 0/0:5:5,0:5:194:0:0:0,-1.50515,-17.8327 0/0:23:23,0:23:899:0:0:0,-6.92369,-81.2249 1/1:25:0,25:0:0:25:967:-87.3413,-7.52575,0 1/1:27:0,27:0:0:27:1011:-91.2915,-8.12781,0 dDocent_Contig_13256 69 . C T 148.323 . AB=0.166667;ABP=66.7068;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=158;DPB=158;DPRA=1.96875;EPP=6.62942;EPPR=296.402;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.533333;PAIREDR=0.832168;PAO=0;PQA=0;PQR=0;PRO=0;QA=551;QR=5306;RO=143;RPL=10;RPP=6.62942;RPPR=296.402;RPR=5;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=143;SRP=313.531;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:526:0:0:0,-4.51545,-47.6618 0/1:21:14,7:14:497:7:248:-16.3428,0,-38.742 0/0:17:17,0:17:649:0:0:0,-5.11751,-58.7435 0/0:38:35,3:35:1271:3:102:0,-1.92269,-105.165 0/0:22:21,1:21:791:1:41:0,-2.52809,-67.4165 0/1:45:41,4:41:1572:4:160:-1.23708,0,-128.181 dDocent_Contig_13257 25 . G A 859.727 . AB=0.9;ABP=44.7026;AC=1;AF=0.0833333;AN=12;AO=27;CIGAR=1X;DP=201;DPB=201;DPRA=0.877193;EPP=61.6401;EPPR=380.846;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.988506;PAO=0;PQA=0;PQR=0;PRO=0;QA=1069;QR=6908;RO=174;RPL=0;RPP=61.6401;RPPR=380.846;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=174;SRP=380.846;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1313:0:0:0,-9.93399,-118.428 0/0:56:56,0:56:2220:0:0:0,-16.8577,-199.973 0/0:46:46,0:46:1832:0:0:0,-13.8474,-165.083 0/0:33:33,0:33:1299:0:0:0,-9.93399,-117.17 0/1:30:3,27:3:123:27:1069:-87.4697,0,-2.43389 0/0:3:3,0:3:121:0:0:0,-0.90309,-11.2802 dDocent_Contig_13258 8 . G T 211.505 . AB=0.135135;ABP=174.146;AC=2;AF=0.166667;AN=12;AO=31;CIGAR=1X;DP=531;DPB=531;DPRA=0.801887;EPP=70.3259;EPPR=1086.58;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1172;QR=19053;RO=499;RPL=0;RPP=70.3259;RPPR=1086.58;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=499;SRP=1086.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:62:53,9:53:2032:9:351:-13.288,0,-164.451 0/1:86:75,11:75:2842:11:407:-11.0844,0,-230.071 0/0:111:104,6:104:3984:6:225:0,-12.7722,-338.058 0/0:74:70,4:70:2637:4:154:0,-8.04276,-223.294 0/0:106:106,0:106:4061:0:0:0,-31.9092,-365.579 0/0:92:91,1:91:3497:1:35:0,-24.1961,-311.36 dDocent_Contig_13259 9 . A G 1384.47 . AB=0.326087;ABP=51.3492;AC=5;AF=0.416667;AN=12;AO=61;CIGAR=1X;DP=205;DPB=205;DPRA=0;EPP=135.47;EPPR=315.702;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.986111;PAO=0;PQA=0;PQR=0;PRO=0;QA=2253;QR=5462;RO=144;RPL=0;RPP=135.47;RPPR=315.702;RPR=61;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=144;SRP=315.702;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:22,2:22:830:2:77:-0.0844219,0,-67.7952 0/1:46:34,12:34:1292:12:454:-27.3589,0,-102.724 0/0:21:20,1:20:758:1:37:0,-2.6238,-64.8496 0/1:29:20,9:20:751:9:309:-19.4038,0,-59.1866 0/1:32:21,11:21:813:11:401:-26.7976,0,-63.861 0/1:53:27,26:27:1018:26:975:-72.1077,0,-75.974 dDocent_Contig_13260 77 . G A 174.001 . AB=0.363636;ABP=6.56362;AC=1;AF=0.125;AN=8;AO=9;CIGAR=1X;DP=87;DPB=87;DPRA=1.28947;EPP=22.5536;EPPR=172.385;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=318;QR=2729;RO=78;RPL=9;RPP=22.5536;RPPR=172.385;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=78;SRP=172.385;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:26,1:26:896:1:36:0,-4.52953,-77.357 0/1:22:14,8:14:481:8:282:-19.0991,0,-36.9952 0/0:17:17,0:17:603:0:0:0,-5.11751,-54.6006 0/0:21:21,0:21:749:0:0:0,-6.32163,-67.7361 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13262 20 . A T 7468.14 . AB=0.618321;ABP=50.7993;AC=6;AF=0.5;AN=12;AO=243;CIGAR=1X;DP=393;DPB=393;DPRA=0;EPP=530.678;EPPR=328.731;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.674897;PAIREDR=0.646667;PAO=0;PQA=0;PQR=0;PRO=0;QA=9722;QR=5952;RO=150;RPL=0;RPP=530.678;RPPR=328.731;RPR=243;RUN=1;SAF=243;SAP=530.678;SAR=0;SRF=150;SRP=328.731;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:63:18,45:18:720:45:1805:-143.693,0,-46.1578 0/1:78:33,45:33:1307:45:1791:-137.924,0,-94.4152 0/1:66:23,43:23:920:43:1730:-136.048,0,-63.2352 0/1:59:23,36:23:908:36:1459:-113.793,0,-64.2639 0/1:65:22,43:22:862:43:1716:-135.089,0,-58.3205 0/1:62:31,31:31:1235:31:1221:-91.4883,0,-92.7597 dDocent_Contig_13263 62 . T C 211.565 . AB=0.243902;ABP=26.3669;AC=3;AF=0.25;AN=12;AO=12;CIGAR=1X;DP=147;DPB=147;DPRA=0.43038;EPP=29.068;EPPR=296.159;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=478;QR=5326;RO=135;RPL=12;RPP=29.068;RPPR=296.159;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=135;SRP=296.159;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:5:3,2:3:115:2:82:-6.27453,0,-9.21806 0/1:23:16,7:16:640:7:274:-18.1024,0,-51.0106 0/0:27:25,2:25:982:2:81:0,-0.442076,-80.9833 0/1:13:12,1:12:468:1:41:-0.181177,0,-38.5546 0/0:14:14,0:14:540:0:0:0,-4.21442,-48.9338 0/0:65:65,0:65:2581:0:0:0,-19.5669,-232.428 dDocent_Contig_13266 8 . G A 90.1213 . AB=0.254545;ABP=31.7922;AC=4;AF=0.333333;AN=12;AO=17;CIGAR=1X2M3X;DP=91;DPB=91;DPRA=0.71;EPP=39.9253;EPPR=163.699;GTI=0;LEN=1;MEANALT=1;MQM=23.2353;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.945946;PAO=0;PQA=0;PQR=0;PRO=0;QA=656;QR=2927;RO=74;RPL=0;RPP=39.9253;RPPR=163.699;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=74;SRP=163.699;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:5:3,2:3:118:2:72:-1.33569,0,-9.49774 0|1:16:13,3:13:515:3:118:-1.1428,0,-41.8825 0|1:9:3,6:3:118:6:232:-10.0417,0,-8.29345 0|0:16:13,3:13:504:3:115:0,-0.622151,-41.5127 0|1:25:22,3:22:874:3:119:-2.11799,0,-71.4503 0|0:20:20,0:20:798:0:0:0,-6.0206,-72.1424 dDocent_Contig_13267 26 . G A 5372.8 . AB=0.415612;ABP=32.3298;AC=6;AF=0.5;AN=12;AO=197;CIGAR=1X;DP=474;DPB=474;DPRA=0;EPP=430.79;EPPR=604.508;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.467005;PAIREDR=0.761733;PAO=0;PQA=0;PQR=0;PRO=0;QA=7662;QR=10865;RO=277;RPL=0;RPP=430.79;RPPR=604.508;RPR=197;RUN=1;SAF=197;SAP=430.79;SAR=0;SRF=277;SRP=604.508;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:62:39,23:39:1507:23:911:-63.6328,0,-117.21 0/1:93:49,44:49:1896:44:1732:-128.109,0,-142.849 0/1:47:24,23:24:933:23:907:-67.7899,0,-70.1234 0/1:125:60,65:60:2389:65:2534:-190.575,0,-177.535 0/1:84:57,27:57:2219:27:1002:-65.1865,0,-174.603 0/1:63:48,15:48:1921:15:576:-33.2081,0,-154.12 dDocent_Contig_13270 31 . T A 1272.75 . AB=0.544304;ABP=4.35716;AC=3;AF=0.25;AN=12;AO=48;CIGAR=1X;DP=229;DPB=229;DPRA=0.949367;EPP=107.241;EPPR=396.047;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.977901;PAO=0;PQA=0;PQR=0;PRO=0;QA=1928;QR=6809;RO=181;RPL=0;RPP=107.241;RPPR=396.047;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=181;SRP=396.047;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:18,8:18:658:8:324:-21.702,0,-51.7178 0/0:71:66,5:66:2457:5:203:0,-2.72007,-202.678 0/1:13:5,8:5:178:8:323:-25.5252,0,-12.4523 0/1:40:13,27:13:486:27:1078:-85.2692,0,-32.0422 0/0:48:48,0:48:1822:0:0:0,-14.4494,-164.213 0/0:31:31,0:31:1208:0:0:0,-9.33193,-109.011 dDocent_Contig_13271 45 . G A 413.096 . AB=0.221154;ABP=73.2491;AC=4;AF=0.333333;AN=12;AO=26;CIGAR=1X;DP=168;DPB=168;DPRA=0;EPP=8.35546;EPPR=311.359;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.961538;PAIREDR=0.93662;PAO=0;PQA=0;PQR=0;PRO=0;QA=987;QR=5298;RO=142;RPL=9;RPP=8.35546;RPPR=311.359;RPR=17;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=142;SRP=311.359;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:6:4,2:4:148:2:74:-5.2197,0,-11.8724 0/1:39:32,7:32:1130:7:270:-12.9241,0,-90.237 0/1:18:14,4:14:542:4:152:-8.63081,0,-43.7031 0/1:41:31,10:31:1199:10:375:-21.7568,0,-95.8558 0/0:28:26,2:26:981:2:76:0,-1.21403,-81.3806 0/0:36:35,1:35:1298:1:40:0,-6.8414,-113.104 dDocent_Contig_13272 29 . T C 33.1511 . AB=0.113208;ABP=71.8828;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=178;DPB=178;DPRA=0.983333;EPP=22.5536;EPPR=369.989;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.775148;PAO=0;PQA=0;PQR=0;PRO=0;QA=357;QR=6649;RO=169;RPL=0;RPP=22.5536;RPPR=369.989;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=169;SRP=369.989;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:17:15,2:15:597:2:80:-2.47407,0,-48.9525 0/1:36:32,4:32:1253:4:161:-4.0384,0,-102.199 0/0:19:18,1:18:706:1:39:0,-1.82301,-59.9648 0/0:46:44,2:44:1748:2:77:0,-6.53918,-150.236 0/0:26:26,0:26:999:0:0:0,-7.82678,-90.2025 0/0:34:34,0:34:1346:0:0:0,-10.235,-121.403 dDocent_Contig_13274 32 . A G 109.626 . AB=0.193548;ABP=28.2974;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=252;DPB=252;DPRA=1.13559;EPP=20.3821;EPPR=532.85;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.125;PAIREDR=0.45082;PAO=0;PQA=0;PQR=0;PRO=0;QA=308;QR=9731;RO=244;RPL=0;RPP=20.3821;RPPR=532.85;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=244;SRP=532.85;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:25,6:25:1001:6:235:-12.1844,0,-81.0572 0/0:42:42,0:42:1674:0:0:0,-12.6433,-150.887 0/0:33:33,0:33:1312:0:0:0,-9.93399,-118.341 0/0:57:56,1:56:2263:1:32:0,-13.9594,-200.628 0/0:43:43,0:43:1720:0:0:0,-12.9443,-155.019 0/0:46:45,1:45:1761:1:41:0,-9.75281,-154.621 dDocent_Contig_13275 8 . G A 207.855 . AB=0.136986;ABP=170.124;AC=4;AF=0.333333;AN=12;AO=22;CIGAR=1X;DP=211;DPB=211;DPRA=1.25517;EPP=50.7827;EPPR=413.419;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.973545;PAO=0;PQA=0;PQR=0;PRO=0;QA=852;QR=7237;RO=189;RPL=0;RPP=50.7827;RPPR=413.419;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=189;SRP=413.419;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:34,2:34:1306:2:77:0,-3.52794,-110.517 0/1:42:38,4:38:1465:4:156:-1.77403,0,-119.484 0/1:36:32,4:32:1225:4:155:-3.48836,0,-99.7054 0/1:37:28,9:28:1067:9:347:-20.4517,0,-85.1953 0/0:29:29,0:29:1123:0:0:0,-8.72987,-101.372 0/1:31:28,3:28:1051:3:117:-1.57845,0,-85.561 dDocent_Contig_13276 200 . C A 54.1145 . AB=0.1875;ABP=16.582;AC=1;AF=0.1;AN=10;AO=4;CIGAR=1X;DP=97;DPB=97;DPRA=1.35294;EPP=11.6962;EPPR=202.786;GTI=0;LEN=1;MEANALT=1;MQM=58;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=164;QR=3526;RO=92;RPL=4;RPP=11.6962;RPPR=202.786;RPR=0;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=202.786;SRR=92;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:1:0,0:0:0:0:0:0,0,0 0/0:30:29,1:29:1111:1:41:0,-4.93633,-96.1982 ./.:.:.:.:.:.:.:. 0/0:19:19,0:19:735:0:0:0,-5.71957,-66.4808 0/0:31:31,0:31:1183:0:0:0,-9.33193,-106.767 0/1:16:13,3:13:497:3:123:-6.63257,0,-40.2597 dDocent_Contig_13277 35 . T C 6029.4 . AB=0.434911;ABP=15.4481;AC=7;AF=0.583333;AN=12;AO=196;CIGAR=1M1X1M;DP=394;DPB=504;DPRA=0;EPP=428.619;EPPR=285.302;GTI=0;LEN=1;MEANALT=2.5;MQM=59.9694;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.591837;PAIREDR=0.976923;PAO=0;PQA=0;PQR=0;PRO=0;QA=7737;QR=4973;RO=130;RPL=0;RPP=428.619;RPPR=285.302;RPR=196;RUN=1;SAF=196;SAP=428.619;SAR=0;SRF=130;SRP=285.302;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:71:19,11,40:19:728:11,40:428,1554:-121.954,-92.5032,-148.938,0,-24.5781,-47.7119 0|1:121:69,14,36:69:2650:14,36:548,1437:-97.5817,-73.3841,-286.691,0,-172.554,-206.689 0|1:34:10,5,19:10:374:5,19:186,739:-57.7247,-45.5172,-74.6317,0,-15.4054,-24.9065 0|1:66:22,23,21:22:830:23,21:907,834:-68.6508,-0.665285,-61.7443,-6.61377,0,-68.2967 0|1:46:7,8,31:7:276:8,31:310,1216:-100.642,-77.284,-97.5847,-2.75074,0,-16.1306 1|1:56:3,4,49:3:115:4,49:158,1957:-165.593,-153.495,-161.728,-5.31775,-1.74208,0 dDocent_Contig_13278 27 . G A 63028.6 . AB=0.831202;ABP=1120.64;AC=9;AF=0.75;AN=12;AO=1907;CIGAR=1X;DP=2143;DPB=2143;DPRA=0;EPP=4144.01;EPPR=515.478;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995763;PAO=0;PQA=0;PQR=0;PRO=0;QA=75591;QR=9396;RO=236;RPL=0;RPP=4144.01;RPPR=515.478;RPR=1907;RUN=1;SAF=1907;SAP=4144.01;SAR=0;SRF=236;SRP=515.478;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:321:60,261:60:2389:261:10307:-830.369,0,-118.537 0/1:414:72,342:72:2840:342:13547:-1093.63,0,-131.082 0/1:438:66,372:66:2655:372:14890:-1207.1,0,-107.215 1/1:449:37,412:37:1472:412:16273:-1330.59,-2.43871,0 1/1:196:1,195:1:40:195:7700:-688.631,-55.0062,0 1/1:325:0,325:0:0:325:12874:-1157.76,-97.8348,0 dDocent_Contig_13279 197 . A G 227.225 . AB=0.391304;ABP=5.3706;AC=1;AF=0.125;AN=8;AO=10;CIGAR=1X;DP=76;DPB=76;DPRA=1.17143;EPP=24.725;EPPR=146.327;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=380;QR=2441;RO=66;RPL=10;RPP=24.725;RPPR=146.327;RPR=0;RUN=1;SAF=0;SAP=24.725;SAR=10;SRF=0;SRP=146.327;SRR=66;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:14,9:14:521:9:341:-24.1204,0,-40.3069 0/0:7:7,0:7:267:0:0:0,-2.10721,-24.3925 0/0:18:17,1:17:614:1:39:0,-1.52198,-51.6883 0/0:28:28,0:28:1039:0:0:0,-8.42884,-93.8121 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13280 98 . N C 124.593 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=128;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:96:-8.9575,-0.90309,0 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13281 73 . C T 83.0401 . AB=0.144928;ABP=78.5712;AC=4;AF=0.333333;AN=12;AO=10;CIGAR=1X;DP=88;DPB=88;DPRA=1.81579;EPP=24.725;EPPR=172.385;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.923077;PAO=0;PQA=0;PQR=0;PRO=0;QA=366;QR=2699;RO=78;RPL=10;RPP=24.725;RPPR=172.385;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=78;SRP=172.385;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:19,2:19:633:2:72:-0.515093,0,-50.9633 0/0:12:12,0:12:405:0:0:0,-3.61236,-36.7755 0/1:12:10,2:10:342:2:74:-3.41352,0,-27.4954 0/1:18:16,2:16:582:2:74:-1.60734,0,-47.2973 0/0:7:7,0:7:249:0:0:0,-2.10721,-22.755 0/1:18:14,4:14:488:4:146:-8.07917,0,-38.8301 dDocent_Contig_13282 35 . G C 160.853 . AB=0.205128;ABP=32.4644;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=714;DPB=714;DPRA=0.288889;EPP=20.3821;EPPR=1533.9;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=322;QR=27482;RO=705;RPL=0;RPP=20.3821;RPPR=1533.9;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=705;SRP=1533.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:130:130,0:130:5127:0:0:0,-39.1339,-461.312 0/0:132:132,0:132:5169:0:0:0,-39.736,-465.103 0/0:153:152,0:152:5846:0:0:0,-45.7566,-525.596 0/0:175:175,0:175:6792:0:0:0,-52.6802,-611.05 0/1:39:31,8:31:1202:8:322:-17.6082,0,-96.7161 0/0:85:85,0:85:3346:0:0:0,-25.5875,-301.217 dDocent_Contig_13284 98 . N T 413.643 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=13;CIGAR=1X;DP=14;DPB=14;DPRA=0;EPP=31.2394;EPPR=0;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=445;QR=0;RO=0;RPL=13;RPP=31.2394;RPPR=0;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:66:-6.26818,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:9:0,9:0:0:9:313:-28.5067,-2.70927,0 1/1:3:0,2:0:0:2:66:-6.11154,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13285 8 . C T 8372.77 . AB=0.349515;ABP=165.091;AC=7;AF=0.583333;AN=12;AO=288;CIGAR=1X6M;DP=824;DPB=826.429;DPRA=0;EPP=628.394;EPPR=469.877;GTI=0;LEN=1;MEANALT=11.1667;MQM=59.9514;MQMR=59.786;NS=6;NUMALT=8;ODDS=0;PAIRED=0.465278;PAIREDR=0.84186;PAO=0;PQA=0;PQR=0;PRO=0;QA=11039;QR=8289;RO=215;RPL=0;RPP=628.394;RPPR=469.877;RPR=288;RUN=1;SAF=288;SAP=628.394;SAR=0;SRF=215;SRP=469.877;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:140:36,0,9,2,0,0,6,61,11:36:1379:0,9,2,0,0,6,61,11:0,334,75,0,0,229,2354,438:-182.492,-193.329,-306.006,-168.559,-281.235,-278.526,-187.56,-300.237,-275.466,-299.635,-193.329,-306.006,-281.235,-300.237,-306.006,-193.329,-306.006,-281.235,-300.237,-306.006,-306.006,-174.541,-287.218,-262.447,-281.449,-287.218,-287.218,-285.412,0,-112.681,-87.9116,-106.912,-112.681,-112.681,-93.8922,-94.3179,-157.262,-269.94,-245.169,-264.17,-269.94,-269.94,-251.151,-76.6121,-266.628 0|1:242:60,0,12,7,3,0,2,99,46:60:2313:0,12,7,3,0,2,99,46:0,430,221,108,0,77,3775,1843:-291.603,-309.665,-499.365,-276.11,-465.809,-462.197,-293.393,-483.092,-449.536,-480.985,-300.94,-490.64,-457.084,-474.367,-489.737,-309.665,-499.365,-465.809,-483.092,-490.64,-499.365,-303.343,-493.043,-459.487,-476.77,-484.318,-493.043,-492.441,0,-189.702,-156.147,-173.43,-180.976,-189.702,-183.379,-159.9,-157.831,-347.534,-313.978,-331.261,-338.809,-347.534,-341.212,-37.8658,-333.687 0|1:96:32,6,2,3,1,1,8,25,15:32:1247:6,2,3,1,1,8,25,15:235,79,116,40,41,303,961,601:-69.2595,-59.5685,-160.257,-72.495,-155.665,-174.387,-69.6056,-152.776,-165.702,-171.197,-75.5972,-158.768,-171.694,-168.805,-177.791,-75.508,-158.679,-171.605,-168.716,-174.707,-177.701,-54.1073,-137.277,-150.204,-147.314,-153.306,-153.217,-154.193,0,-83.1698,-96.0961,-93.2068,-99.1984,-99.1092,-77.7085,-94.9678,-29.3763,-112.548,-125.475,-122.585,-128.577,-128.488,-107.087,-52.9784,-127.357 0|1:179:55,0,5,5,0,12,9,54,27:55:2127:0,5,5,0,12,9,54,27:0,193,175,0,469,330,2075,1075:-153.786,-170.342,-345.049,-154.891,-329.598,-328.093,-158.096,-332.802,-317.351,-331.297,-170.342,-345.049,-329.598,-332.802,-345.049,-131.787,-306.494,-291.043,-294.247,-306.494,-302.882,-143.855,-318.562,-303.111,-306.314,-318.562,-280.006,-315.852,0,-174.708,-159.257,-162.461,-174.708,-136.152,-148.221,-158.452,-81.8262,-256.535,-241.084,-244.288,-256.535,-217.979,-230.047,-86.1922,-248.407 1|1:61:8,0,6,11,5,2,3,21,2:8:303:0,6,11,5,2,3,21,2:0,235,410,197,82,116,808,82:-71.1558,-73.564,-98.4025,-54.2399,-79.0784,-77.2722,-41.4987,-66.3359,-47.0124,-63.0246,-57.3553,-82.1939,-62.8696,-50.1277,-80.6887,-66.7948,-91.6334,-72.3092,-59.5669,-75.4247,-91.0314,-64.0441,-88.8826,-69.5584,-56.8163,-72.6739,-82.1135,-87.9795,-7.22463,-32.0629,-12.7381,0,-15.8536,-25.2933,-22.5428,-25.7413,-66.7948,-91.6334,-72.3092,-59.5669,-75.4247,-84.8643,-82.1135,-25.2933,-91.0314 0|1:106:24,0,9,19,3,1,2,28,7:24:920:0,9,19,3,1,2,28,7:0,339,660,117,40,73,1066,251:-80.2024,-87.4271,-162.938,-60.9018,-136.413,-133.703,-36.9318,-112.44,-85.9164,-106.721,-77.9641,-153.475,-126.95,-102.978,-152.572,-84.1316,-159.642,-133.117,-109.145,-150.179,-159.341,-81.6367,-157.147,-130.622,-106.65,-147.684,-153.852,-156.545,0,-75.5146,-48.9893,-25.02,-66.0515,-72.2191,-69.7242,-67.0858,-66.9703,-142.481,-115.956,-91.9845,-133.018,-139.186,-136.691,-55.0578,-140.374 dDocent_Contig_13286 148 . A G 266.293 . AB=0.15;ABP=24.2907;AC=0;AF=0;AN=12;AO=3;CIGAR=1M1D3M1X7M;DP=58;DPB=56.7692;DPRA=3.63636;EPP=9.52472;EPPR=89.8692;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.875;PAO=0;PQA=0;PQR=0;PRO=0;QA=121;QR=1586;RO=40;RPL=3;RPP=9.52472;RPPR=89.8692;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=89.8692;SRR=40;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:6:2,0,4:2:80:0,4:0,159:-12.8858,-13.4878,-20.0788,0,-6.98973,-5.78561 0|0:9:6,0,3:6:242:0,3:0,116:-8.10775,-9.91393,-29.8734,0,-20.3513,-19.4483 0|0:12:10,0,2:10:400:0,2:0,73:-3.31771,-6.32801,-39.3078,0,-33.3504,-32.7483 0|0:20:13,3,4:13:505:3,4:121,163:-9.53629,-3.4772,-44.0547,0,-31.506,-40.2789 0|0:5:4,0,0:4:159:0,0:0,0:0,-1.20412,-14.2931,-1.20412,-14.2931,-14.2931 0|0:6:5,0,0:5:200:0,0:0,0:0,-1.50515,-17.9803,-1.50515,-17.9803,-17.9803 dDocent_Contig_13287 16 . C T 39.453 . AB=0.157895;ABP=22.325;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=147;DPB=147;DPRA=1.94;EPP=13.8677;EPPR=309.188;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.985816;PAO=0;PQA=0;PQR=0;PRO=0;QA=201;QR=5634;RO=141;RPL=0;RPP=13.8677;RPPR=309.188;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=141;SRP=309.188;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:27,1:27:1055:1:40:0,-4.43316,-91.2397 0/0:29:28,0:28:1131:0:0:0,-8.42884,-101.661 0/1:19:16,3:16:651:3:120:-5.46812,0,-53.2025 0/0:50:49,1:49:1950:1:41:0,-10.9569,-171.606 0/0:15:15,0:15:603:0:0:0,-4.51545,-54.608 0/0:6:6,0:6:244:0:0:0,-1.80618,-22.3388 dDocent_Contig_13288 25 . T A 1772.36 . AB=0.180995;ABP=393.698;AC=7;AF=0.583333;AN=12;AO=80;CIGAR=1M1X1M;DP=442;DPB=440.333;DPRA=0;EPP=176.728;EPPR=715.357;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=2.77556e-17;PAIRED=0.9875;PAIREDR=0.973214;PAO=0;PQA=0;PQR=0;PRO=0;QA=3108;QR=13310;RO=336;RPL=0;RPP=176.728;RPPR=732.625;RPR=80;RUN=1;SAF=80;SAP=176.728;SAR=0;SRF=334;SRP=715.357;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:96:70,0,0,26:70:2791:0,0,26:0,0,988:-60.3111,-81.3832,-311.235,-81.3832,-311.235,-311.235,0,-230.236,-230.236,-222.41 0|1:119:103,0,0,15:103:4066:0,0,15:0,0,606:-19.237,-50.2431,-384.792,-50.2431,-384.792,-384.792,0,-334.832,-334.832,-330.316 0|1:101:91,0,0,9:91:3625:0,0,9:0,0,355:-2.07489,-29.4686,-327.994,-29.4686,-327.994,-327.994,0,-298.79,-298.79,-296.081 0|1:51:46,0,0,5:46:1817:0,0,5:0,0,185:-1.65604,-15.5034,-165.033,-15.5034,-165.033,-165.033,0,-149.902,-149.902,-148.397 0|1:33:18,0,1,14:18:693:0,1,14:0,36,547:-39.5791,-44.9976,-101.89,-42.0623,-98.9533,-98.6523,0,-56.9178,-53.9817,-52.7034 1|1:42:8,5,18,11:8:318:5,18,11:188,713,427:-65.1705,-52.1825,-76.8593,-8.89006,-19.68,-29.6569,-32.5039,-43.291,0,-55.3751 dDocent_Contig_13290 32 . T C 230.356 . AB=0.183099;ABP=64.9431;AC=2;AF=0.166667;AN=12;AO=19;CIGAR=1X;DP=238;DPB=238;DPRA=1.2875;EPP=44.2683;EPPR=478.563;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.526316;PAIREDR=0.694064;PAO=0;PQA=0;PQR=0;PRO=0;QA=744;QR=8748;RO=219;RPL=0;RPP=44.2683;RPPR=478.563;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=219;SRP=478.563;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:13,3:13:504:3:118:-6.1851,0,-40.8775 0/0:34:32,2:32:1279:2:82:0,-2.45534,-107.595 0/0:62:60,2:60:2396:2:67:0,-12.3032,-209.427 0/0:39:37,2:37:1481:2:74:0,-4.7144,-126.503 0/0:32:32,0:32:1295:0:0:0,-9.63296,-116.813 0/1:55:45,10:45:1793:10:403:-20.0723,0,-145.032 dDocent_Contig_13291 36 . A G 1218.11 . AB=0.260664;ABP=107.992;AC=6;AF=0.5;AN=12;AO=55;CIGAR=1X;DP=211;DPB=211;DPRA=0;EPP=122.441;EPPR=341.76;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.490909;PAIREDR=0.307692;PAO=0;PQA=0;PQR=0;PRO=0;QA=2160;QR=6104;RO=156;RPL=0;RPP=122.441;RPPR=341.76;RPR=55;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=156;SRP=341.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:17,8:17:674:8:312:-20.9136,0,-53.4664 0/1:46:35,11:35:1361:11:427:-24.9281,0,-108.9 0/1:26:21,5:21:802:5:199:-10.4617,0,-64.6526 0/1:50:40,10:40:1578:10:395:-20.8575,0,-127.214 0/1:32:21,11:21:819:11:436:-29.9616,0,-64.3897 0/1:32:22,10:22:870:10:391:-25.9102,0,-68.9766 dDocent_Contig_13293 14 . A G 2628.34 . AB=0.461538;ABP=4.68066;AC=8;AF=0.666667;AN=12;AO=91;CIGAR=1X;DP=161;DPB=161;DPRA=0;EPP=200.614;EPPR=155.013;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.978022;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3413;QR=2658;RO=70;RPL=0;RPP=200.614;RPPR=155.013;RPR=91;RUN=1;SAF=91;SAP=200.614;SAR=0;SRF=70;SRP=155.013;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:18,13:18:664:13:496:-35.6542,0,-50.7515 0/1:28:9,19:9:342:19:708:-55.6194,0,-22.708 0/1:39:18,21:18:690:21:765:-57.4218,0,-50.6888 0/1:32:25,7:25:962:7:264:-14.4855,0,-77.2577 1/1:9:0,9:0:0:9:343:-31.2274,-2.70927,0 1/1:22:0,22:0:0:22:837:-75.648,-6.62266,0 dDocent_Contig_13294 13 . G A 4691.89 . AB=0.361224;ABP=84.9767;AC=6;AF=0.5;AN=12;AO=177;CIGAR=1X2M1X2M1X1M1X;DP=490;DPB=490;DPRA=0;EPP=387.361;EPPR=671.824;GTI=0;LEN=1;MEANALT=1.83333;MQM=59.9831;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.457627;PAIREDR=0.282468;PAO=0;PQA=0;PQR=0;PRO=0;QA=6954;QR=11832;RO=308;RPL=0;RPP=387.361;RPPR=671.824;RPR=177;RUN=1;SAF=177;SAP=387.361;SAR=0;SRF=308;SRP=671.824;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:81:47,34:47:1788:34:1338:-96.3047,0,-136.788 0|1:76:49,27:49:1901:27:1048:-71.7366,0,-148.449 0|1:72:48,21:48:1861:21:835:-54.2972,0,-146.562 0|1:69:42,27:42:1601:27:1063:-75.1968,0,-123.584 0|1:83:57,25:57:2191:25:986:-63.958,0,-172.327 0|1:109:65,43:65:2490:43:1684:-118.918,0,-191.418 dDocent_Contig_13295 23 . G T 837.56 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1M1X;DP=210;DPB=210;DPRA=0.614973;EPP=52.9542;EPPR=409.076;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.967914;PAO=0;PQA=0;PQR=0;PRO=0;QA=922;QR=7422;RO=187;RPL=0;RPP=52.9542;RPPR=409.076;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=187;SRP=409.076;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:27:27,0:27:1075:0:0:0,-8.12781,-97.0398 0|0:35:35,0:35:1375:0:0:0,-10.536,-124.012 0|0:24:24,0:24:943:0:0:0,-7.22472,-85.1696 0|0:69:69,0:69:2755:0:0:0,-20.7711,-248.062 1|1:23:0,23:0:0:23:922:-83.2788,-6.92369,0 0|0:32:32,0:32:1274:0:0:0,-9.63296,-114.927 dDocent_Contig_13296 9 . T C 24681.5 . AB=0.200864;ABP=722.729;AC=9;AF=0.75;AN=12;AO=186;CIGAR=1X6M;DP=1292;DPB=1292;DPRA=1.26503;EPP=406.904;EPPR=647.938;GTI=0;LEN=1;MEANALT=3.25;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7024;QR=11526;RO=297;RPL=0;RPP=406.904;RPPR=647.938;RPR=186;RUN=1;SAF=186;SAP=406.904;SAR=0;SRF=297;SRP=647.938;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:233:48,14,147,24:48:1843:14,147,24:535,5704,922:-454.194,-424.75,-571.811,0,-107.383,-107.025,-392.955,-500.337,-75.5876,-537.006 1|1:213:55,9,76,71:55:2159:9,76,71:355,2954,2703:-270.324,-257.67,-432.527,-44.1349,-192.494,-198.825,-65.1752,-213.531,0,-221.368 0|1:285:111,0,99,75:111:4329:0,99,75:0,3843,2797:-282.343,-315.757,-671.591,0,-355.841,-326.039,-86.8062,-442.638,-126.891,-420.061 0|1:195:83,25,71,16:83:3195:25,71,16:977,2785,602:-204.055,-148.721,-403.504,0,-181.99,-240.938,-179.721,-361.709,-212.991,-437.212 1|1:104:0,0,102,0:0:0:0,102,0:0,3966,0:-356.646,-356.646,-356.646,-30.7051,-30.7051,0,-356.646,-356.646,-30.7051,-356.646 1|1:262:0,0,261,0:0:0:0,261,0:0,10102,0:-907.81,-907.81,-907.81,-78.5688,-78.5688,0,-907.81,-907.81,-78.5688,-907.81 dDocent_Contig_13297 21 . C G 141.288 . AB=0.166667;ABP=49.335;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=265;DPB=265;DPRA=1.54808;EPP=35.5824;EPPR=545.878;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.733333;PAIREDR=0.632;PAO=0;PQA=0;PQR=0;PRO=0;QA=609;QR=9795;RO=250;RPL=0;RPP=35.5824;RPPR=545.878;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=250;SRP=545.878;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:48:40,8:40:1566:8:327:-15.3507,0,-126.721 0/0:58:55,3:55:2126:3:119:0,-6.36473,-180.426 0/0:40:40,0:40:1591:0:0:0,-12.0412,-143.423 0/0:55:51,4:51:2005:4:163:0,-1.49822,-165.588 0/0:29:29,0:29:1123:0:0:0,-8.72987,-101.36 0/0:35:35,0:35:1384:0:0:0,-10.536,-124.812 dDocent_Contig_13299 79 . T C 97.7684 . AB=0.227273;ABP=17.2236;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=194;DPB=194;DPRA=0.621622;EPP=18.2106;EPPR=409.076;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.428571;PAIREDR=0.475936;PAO=0;PQA=0;PQR=0;PRO=0;QA=263;QR=6671;RO=187;RPL=3;RPP=3.32051;RPPR=49.0989;RPR=4;RUN=1;SAF=3;SAP=3.32051;SAR=4;SRF=125;SRP=49.0989;SRR=62;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:39:39,0:39:1419:0:0:0,-11.7402,-127.983 0/0:35:35,0:35:1234:0:0:0,-10.536,-111.345 0/0:25:25,0:25:885:0:0:0,-7.52575,-79.9542 0/0:49:49,0:49:1730:0:0:0,-14.7505,-155.961 0/1:22:17,5:17:586:5:195:-11.2996,0,-46.4374 0/0:24:22,2:22:817:2:68:0,-0.766789,-67.3822 dDocent_Contig_13300 9 . T C 871.903 . AB=0.265306;ABP=73.3394;AC=4;AF=0.5;AN=8;AO=39;CIGAR=1X;DP=147;DPB=147;DPRA=0;EPP=87.6977;EPPR=237.529;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.962963;PAO=0;PQA=0;PQR=0;PRO=0;QA=1509;QR=4153;RO=108;RPL=0;RPP=87.6977;RPPR=237.529;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=108;SRP=237.529;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:14,18:14:540:18:702:-53.881,0,-39.3123 0/1:51:43,8:43:1645:8:308:-12.7293,0,-132.963 0/1:11:10,1:10:389:1:37:-0.386499,0,-32.057 0/1:53:41,12:41:1579:12:462:-25.9753,0,-126.423 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13301 27 . C G 73.4917 . AB=0.333333;ABP=5.18177;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=130;DPB=130;DPRA=0.371901;EPP=9.52472;EPPR=276.616;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=121;QR=4972;RO=126;RPL=0;RPP=9.52472;RPPR=276.616;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=126;SRP=276.616;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:9:6,3:6:238:3:121:-8.57093,0,-19.0845 0/0:3:3,0:3:107:0:0:0,-0.90309,-9.9764 0/0:11:10,0:10:408:0:0:0,-3.0103,-36.6803 0/0:42:42,0:42:1674:0:0:0,-12.6433,-150.886 0/0:24:24,0:24:949:0:0:0,-7.22472,-85.706 0/0:41:41,0:41:1596:0:0:0,-12.3422,-143.871 dDocent_Contig_13303 9 . T G 17770 . AB=0.734772;ABP=380.262;AC=6;AF=0.5;AN=12;AO=579;CIGAR=1X1M1X2M1X;DP=788;DPB=788;DPRA=0;EPP=1260.29;EPPR=409.076;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.989637;PAIREDR=0.97861;PAO=0;PQA=0;PQR=0;PRO=0;QA=22443;QR=7351;RO=187;RPL=0;RPP=1260.29;RPPR=409.076;RPR=579;RUN=1;SAF=579;SAP=1260.29;SAR=0;SRF=187;SRP=409.076;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:126:27,93:27:1053:93:3582:-285.987,0,-58.5689 0|1:114:41,69:41:1627:69:2678:-207.672,0,-113.161 0|1:83:39,44:39:1537:44:1722:-130.238,0,-113.601 0|1:129:21,103:21:827:103:3994:-321.794,0,-37.03 0|1:162:21,141:21:818:141:5470:-443.471,0,-25.173 0|1:174:38,129:38:1489:129:4997:-399.055,0,-83.6162 dDocent_Contig_13304 10 . T G 2286.77 . AB=0.160804;ABP=201.88;AC=2;AF=0.166667;AN=12;AO=32;CIGAR=1M1X22M;DP=437;DPB=429.292;DPRA=0;EPP=72.4974;EPPR=241.872;GTI=0;LEN=1;MEANALT=13;MQM=60;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=1;PAIREDR=0.781818;PAO=1.11111;PQA=38.6667;PQR=38.6667;PRO=1.11111;QA=1272;QR=4286;RO=110;RPL=0;RPP=72.4974;RPPR=241.872;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=110;SRP=241.872;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:66:20,3,8,6,0,0,0,9,0,0:20:790:3,8,6,0,0,0,9,0,0:115,310,236,0,0,0,347,0,0:-22.4657,-19.0481,-83.1542,-3.02038,-58.5913,-65.6213,-9.07546,-64.6467,-48.6189,-72.2788,-28.4863,-84.0573,-68.0295,-74.085,-93.4956,-28.4863,-84.0573,-68.0295,-74.085,-93.4956,-93.4956,-28.4863,-84.0573,-68.0295,-74.085,-93.4956,-93.4956,-93.4956,0,-55.5708,-39.5432,-45.5984,-65.009,-65.009,-65.009,-62.2997,-28.4863,-84.0573,-68.0295,-74.085,-93.4956,-93.4956,-93.4956,-65.009,-93.4956,-28.4863,-84.0573,-68.0295,-74.085,-93.4956,-93.4956,-93.4956,-65.009,-93.4956,-93.4956 0|0:85:20,13,3,12,0,6,1,8,0,0:20:764:13,3,12,0,6,1,8,0,0:481,121,461,0,237,41,313,0,0:-33.3193,0,-58.7669,-29.3648,-52.7054,-91.1435,-1.50472,-24.8454,-54.211,-60.5737,-39.3399,-62.6803,-92.0466,-64.186,-102.021,-19.8384,-43.1791,-72.5452,-44.6846,-82.5202,-80.714,-35.9554,-59.2959,-88.6622,-60.8016,-98.6371,-79.1358,-98.3361,-13.6058,-36.9465,-66.3124,-38.4519,-76.2874,-56.786,-72.903,-73.8792,-39.3399,-62.6803,-92.0466,-64.186,-102.021,-82.5202,-98.6371,-76.2874,-102.021,-39.3399,-62.6803,-92.0466,-64.186,-102.021,-82.5202,-98.6371,-76.2874,-102.021,-102.021 0|0:87:18,6,3,4,0,7,3,13,1,0:18:711:6,3,4,0,7,3,13,1,0:218,120,146,0,272,112,519,41,0:-37.3278,-24.948,-81.6499,-32.8609,-73.5708,-90.4665,-30.8235,-71.5331,-79.4465,-88.1277,-42.7464,-83.4561,-91.3696,-89.3318,-101.255,-20.3963,-61.1063,-69.0196,-66.9819,-78.9049,-76.7977,-33.5783,-74.2881,-82.2015,-80.1637,-92.0868,-69.7368,-91.1837,0,-40.7107,-48.6238,-46.5863,-58.5093,-36.1591,-49.3412,-54.5959,-39.362,-80.0718,-87.9853,-85.9475,-97.8707,-75.5206,-88.7025,-55.1249,-97.5696,-42.7464,-83.4561,-91.3696,-89.3318,-101.255,-78.9049,-92.0868,-58.5093,-97.8707,-101.255 0|0:116:33,8,0,17,5,11,4,11,2,2:33:1274:8,0,17,5,11,4,11,2,2:282,0,664,196,409,160,413,79,82:-44.6506,-31.6299,-133.847,-54.5845,-136.255,-159.211,0,-81.6729,-104.628,-99.5103,-38.4658,-120.137,-143.092,-88.5093,-141.587,-21.1163,-102.788,-125.743,-71.1596,-109.624,-122.431,-41.4032,-123.075,-146.03,-91.4468,-129.911,-112.562,-144.826,-20.7606,-102.432,-125.387,-70.804,-109.269,-91.919,-112.206,-122.076,-48.0835,-129.755,-152.71,-98.1269,-136.591,-119.242,-139.529,-118.886,-152.108,-47.8156,-129.487,-152.442,-97.859,-136.324,-118.974,-139.261,-118.618,-145.941,-151.84 0|1:40:3,0,0,0,2,1,2,0,6,19:3:120:0,0,0,2,1,2,0,6,19:0,0,0,71,34,78,0,240,762:-71.7694,-72.6725,-82.5581,-72.6725,-82.5581,-82.5581,-72.6725,-82.5581,-82.5581,-82.5581,-66.8922,-76.7776,-76.7776,-76.7776,-76.1755,-69.9161,-79.8015,-79.8015,-79.8015,-74.0212,-79.5005,-66.2613,-76.1468,-76.1468,-76.1468,-70.3665,-73.3903,-75.5448,-72.6725,-82.5581,-82.5581,-82.5581,-76.7776,-79.8015,-76.1468,-82.5581,-52.9014,-62.7871,-62.7871,-62.7871,-57.007,-60.0308,-56.3759,-62.7871,-60.9809,-9.88696,-19.7736,-19.7736,-19.7736,-13.9948,-17.0182,-13.3622,-19.7736,0,-14.054 0|1:43:16,0,0,2,3,2,0,0,2,11:16:627:0,0,2,3,2,0,0,2,11:0,0,77,105,79,0,0,82,428:-30.3642,-35.1806,-86.7482,-35.1806,-86.7482,-86.7482,-28.8582,-80.4265,-80.4265,-79.8244,-26.6441,-78.211,-78.211,-71.8894,-77.308,-28.6779,-80.2465,-80.2465,-73.9247,-71.7094,-79.6445,-35.1806,-86.7482,-86.7482,-80.4265,-78.211,-80.2465,-86.7482,-35.1806,-86.7482,-86.7482,-80.4265,-78.211,-80.2465,-86.7482,-86.7482,-28.4095,-79.9786,-79.9786,-73.6568,-71.4414,-73.4768,-79.9786,-79.9786,-79.3765,0,-51.5756,-51.5756,-45.2535,-43.0389,-45.0734,-51.5756,-51.5756,-44.8052,-48.2643 dDocent_Contig_13305 30 . C A 397.339 . AB=0.192982;ABP=96.3455;AC=3;AF=0.25;AN=12;AO=23;CIGAR=1X;DP=238;DPB=238;DPRA=1.58772;EPP=52.9542;EPPR=469.877;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=909;QR=8619;RO=215;RPL=0;RPP=52.9542;RPPR=469.877;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=215;SRP=469.877;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:30,6:30:1193:6:232:-10.4064,0,-96.8111 0/0:38:38,0:38:1530:0:0:0,-11.4391,-137.94 0/1:36:24,12:24:962:12:477:-32.4405,0,-76.0437 0/1:42:38,4:38:1515:4:159:-2.04849,0,-123.947 0/0:19:19,0:19:773:0:0:0,-5.71957,-69.8887 0/0:67:66,1:66:2646:1:41:0,-16.0744,-234.167 dDocent_Contig_13306 46 . A G 939.875 . AB=0.205761;ABP=185.745;AC=4;AF=0.333333;AN=12;AO=50;CIGAR=1X;DP=256;DPB=256;DPRA=9.34615;EPP=111.584;EPPR=450.334;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995146;PAO=0;PQA=0;PQR=0;PRO=0;QA=1922;QR=7893;RO=206;RPL=0;RPP=111.584;RPPR=450.334;RPR=50;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=206;SRP=450.334;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:52:43,9:43:1636:9:352:-16.3843,0,-131.82 0/1:36:30,6:30:1143:6:232:-10.4111,0,-92.3111 0/1:89:68,21:68:2626:21:812:-46.6053,0,-209.693 0/1:66:52,14:52:2004:14:526:-27.8082,0,-160.691 0/0:1:1,0:1:36:0:0:0,-0.30103,-3.59827 0/0:12:12,0:12:448:0:0:0,-3.61236,-40.6541 dDocent_Contig_13308 14 . T C 705.127 . AB=0.24031;ABP=78.5742;AC=3;AF=0.25;AN=12;AO=31;CIGAR=1X;DP=227;DPB=227;DPRA=1.31633;EPP=70.3259;EPPR=346.192;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9592;NS=6;NUMALT=1;ODDS=0;PAIRED=0.258065;PAIREDR=0.311224;PAO=0;PQA=0;PQR=0;PRO=0;QA=1261;QR=7816;RO=196;RPL=0;RPP=70.3259;RPPR=428.619;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=186;SRP=346.192;SRR=10;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:28,10:28:1074:10:410:-25.8214,0,-85.5066 0/1:36:31,5:31:1242:5:204:-7.90695,0,-101.212 0/0:12:12,0:12:490:0:0:0,-3.61236,-44.4511 0/1:55:39,16:39:1546:16:647:-42.0061,0,-122.824 0/0:36:36,0:36:1437:0:0:0,-10.8371,-129.583 0/0:50:50,0:50:2027:0:0:0,-15.0515,-182.609 dDocent_Contig_13309 57 . T A 37.1952 . AB=0.125;ABP=42.0968;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=151;DPB=151;DPRA=1.34454;EPP=11.6962;EPPR=322.217;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.829932;PAO=0;PQA=0;PQR=0;PRO=0;QA=161;QR=5876;RO=147;RPL=4;RPP=11.6962;RPPR=322.217;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=147;SRP=322.217;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:884:0:0:0,-6.62266,-79.8654 0/0:28:28,0:28:1136:0:0:0,-8.42884,-102.519 0/0:12:12,0:12:475:0:0:0,-3.61236,-43.0957 0/1:32:28,4:28:1127:4:161:-5.24231,0,-92.0791 0/0:31:31,0:31:1243:0:0:0,-9.33193,-112.141 0/0:26:26,0:26:1011:0:0:0,-7.82678,-91.2787 dDocent_Contig_13310 13 . T C 49580 . AB=0.289521;ABP=854.949;AC=7;AF=0.583334;AN=12;AO=641;CIGAR=2M1X4M;DP=2214;DPB=2101;DPRA=0;EPP=1394.92;EPPR=465.534;GTI=0;LEN=1;MEANALT=5.66667;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=25709;QR=8399;RO=213;RPL=0;RPP=1394.92;RPPR=465.534;RPR=641;RUN=1;SAF=641;SAP=1394.92;SAR=0;SRF=213;SRP=465.534;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:239:47,12,17,124,38:47:1837:12,17,124,38:480,644,4796,1495:-379.729,-354.336,-501.742,-341.088,-452.566,-486.989,0,-111.476,-98.2301,-113.69,-270.916,-382.394,-369.146,-28.0569,-410.496 0|1:342:71,8,45,128,89:71:2801:8,45,128,89:309,1788,5011,3546:-452.127,-448.124,-676.172,-326.305,-531.385,-543.215,-61.5217,-266.601,-144.782,-253.445,-181.523,-386.603,-264.784,0,-385.188 0|1:345:46,1,31,162,103:46:1816:1,31,162,103:40,1227,6425,4143:-706.991,-717.543,-866.666,-619.863,-765.991,-759.954,-191.997,-338.125,-240.445,-292.653,-379.42,-525.549,-427.868,0,-497.838 0|1:273:47,2,0,153,68:47:1865:2,0,153,68:78,0,5929,2725:-543.797,-551.534,-704.461,-557.946,-705.063,-711.475,-70.9647,-218.08,-224.492,-178.434,-333.452,-480.571,-486.983,0,-466.513 1|1:369:0,216,0,38,113:0:0:216,0,38,113:8543,0,1509,4558:-1078.7,-375.711,-310.688,-1078.7,-375.711,-1078.7,-954.483,-251.492,-954.483,-943.044,-702.995,0,-702.995,-578.774,-668.978 1|1:646:2,323,0,87,230:2:80:323,0,87,230:12800,0,3365,9242:-1807.88,-754.967,-664.324,-1808.48,-761.557,-1815.07,-1532.12,-485.207,-1538.72,-1512.53,-1046.93,0,-1053.52,-777.166,-984.281 dDocent_Contig_13311 8 . C G 178.72 . AB=0.857143;ABP=10.7656;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=283;DPB=283;DPRA=1.05946;EPP=31.2394;EPPR=589.308;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=492;QR=10405;RO=270;RPL=0;RPP=31.2394;RPPR=589.308;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=270;SRP=589.308;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:91:84,7:84:3254:7:260:0,-3.63943,-269.244 0/0:55:55,0:55:2123:0:0:0,-16.5566,-191.297 0/0:58:58,0:58:2213:0:0:0,-17.4597,-199.394 0/0:69:69,0:69:2659:0:0:0,-20.7711,-239.499 0/1:7:1,6:1:39:6:232:-19.1417,0,-1.78935 0/0:3:3,0:3:117:0:0:0,-0.90309,-10.9104 dDocent_Contig_13312 144 . T C 6197.72 . AB=0.623003;ABP=44.1434;AC=7;AF=0.583333;AN=12;AO=195;CIGAR=1X2M;DP=313;DPB=313;DPRA=0;EPP=426.447;EPPR=198.443;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.994872;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7283;QR=3480;RO=90;RPL=0;RPP=426.447;RPPR=198.443;RPR=195;RUN=1;SAF=0;SAP=426.447;SAR=195;SRF=0;SRP=198.443;SRR=90;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:8:4,0,4:4:152:0,4:0,157:-12.0997,-13.3038,-25.7609,0,-12.843,-11.6389 0|1:40:35,0,5:35:1380:0,5:0,194:-5.79073,-16.3268,-129.87,0,-113.932,-112.427 0|1:10:6,0,4:6:240:0,4:0,153:-11.1276,-12.9338,-32.7137,0,-20.169,-18.9648 0|1:13:2,0,10:2:79:0,10:0,370:-29.7276,-30.3296,-36.8352,0,-6.57034,-3.56004 0|1:126:36,0,89:36:1378:0,89:0,3354:-263.973,-274.81,-387.884,0,-113.056,-86.2648 1|1:116:7,26,83:7:251:26,83:989,3055:-308.274,-229.285,-241.924,-60.6486,0,-56.1247 dDocent_Contig_13313 7 . A C 58.7444 . AB=0.16129;ABP=33.9012;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X1M1X;DP=537;DPB=537;DPRA=0.651852;EPP=20.3821;EPPR=1143.03;GTI=0;LEN=1;MEANALT=1.5;MQM=43;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.998095;PAO=0;PQA=0;PQR=0;PRO=0;QA=304;QR=19914;RO=525;RPL=0;RPP=20.3821;RPPR=1143.03;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=525;SRP=1143.03;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:31:26,5:26:989:5:188:-7.09629,0,-79.9921 0|0:60:60,0:60:2294:0:0:0,-18.0618,-206.682 0|0:30:30,0:30:1144:0:0:0,-9.0309,-103.263 0|0:101:97,3:97:3660:3:116:0,-19.8705,-318.91 0|0:159:158,0:158:5990:0:0:0,-47.5627,-538.703 0|0:156:154,0:154:5837:0:0:0,-46.3586,-524.925 dDocent_Contig_13314 148 . C T 5543.98 . AB=0.734127;ABP=122.993;AC=4;AF=0.5;AN=8;AO=185;CIGAR=1X2M2X;DP=252;DPB=252;DPRA=0;EPP=404.733;EPPR=144.156;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7071;QR=2495;RO=65;RPL=0;RPP=404.733;RPPR=144.156;RPR=185;RUN=1;SAF=0;SAP=404.733;SAR=185;SRF=0;SRP=144.156;SRR=65;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:40:8,32:8:296:32:1257:-101.368,0,-14.9491 0|1:79:32,47:32:1220:47:1801:-138.54,0,-86.3054 0|1:29:10,19:10:391:19:735:-57.7425,0,-26.8189 0|1:104:15,87:15:588:87:3278:-264.144,0,-22.2633 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_13315 17 . A G 870.724 . AB=0.251701;ABP=81.7299;AC=1;AF=0.0833333;AN=12;AO=57;CIGAR=1X;DP=684;DPB=684;DPRA=1.44819;EPP=126.784;EPPR=1364.52;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2270;QR=24976;RO=627;RPL=0;RPP=126.784;RPPR=1364.52;RPR=57;RUN=1;SAF=57;SAP=126.784;SAR=0;SRF=627;SRP=1364.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:147:110,37:110:4371:37:1470:-88.2942,0,-349.098 0/0:111:104,7:104:4121:7:278:0,-8.02558,-345.477 0/0:93:89,4:89:3553:4:164:0,-12.8459,-304.652 0/0:168:164,4:164:6575:4:160:0,-35.7896,-576.673 0/0:83:83,0:83:3314:0:0:0,-24.9855,-298.32 0/0:82:77,5:77:3042:5:198:0,-6.4882,-255.674 dDocent_Contig_13317 12 . C A 416.037 . AB=0.410256;ABP=5.73856;AC=1;AF=0.0833333;AN=12;AO=19;CIGAR=1X;DP=258;DPB=258;DPRA=1.24528;EPP=44.2683;EPPR=521.992;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.987448;PAO=0;PQA=0;PQR=0;PRO=0;QA=720;QR=9243;RO=239;RPL=0;RPP=44.2683;RPPR=521.992;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=239;SRP=521.992;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:37,0:37:1424:0:0:0,-11.1381,-128.415 0/1:39:23,16:23:901:16:606:-43.1266,0,-69.6569 0/0:60:57,3:57:2196:3:114:0,-7.42999,-187.188 0/0:49:49,0:49:1904:0:0:0,-14.7505,-171.571 0/0:42:42,0:42:1631:0:0:0,-12.6433,-147.025 0/0:31:31,0:31:1187:0:0:0,-9.33193,-107.105 dDocent_Contig_13318 38 . C A 42.1343 . AB=0.119048;ABP=55.9529;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=206;DPB=206;DPRA=1.32258;EPP=20.3821;EPPR=432.962;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=304;QR=7790;RO=198;RPL=0;RPP=20.3821;RPPR=432.962;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=198;SRP=432.962;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:690:0:0:0,-5.11751,-62.4293 0/0:45:45,0:45:1765:0:0:0,-13.5463,-159.071 0/0:16:16,0:16:591:0:0:0,-4.81648,-53.5025 0/0:40:37,3:37:1454:3:104:0,-2.3427,-121.418 0/0:46:46,0:46:1813:0:0:0,-13.8474,-163.389 0/1:42:37,5:37:1477:5:200:-5.73628,0,-120.532 dDocent_Contig_13319 67 . A C 261.648 . AB=0.230769;ABP=35.7494;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=122;DPB=122;DPRA=1.48571;EPP=29.068;EPPR=241.872;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990909;PAO=0;PQA=0;PQR=0;PRO=0;QA=492;QR=4333;RO=110;RPL=12;RPP=29.068;RPPR=241.872;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=110;SRP=241.872;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:938:0:0:0,-7.22472,-84.724 0/0:14:14,0:14:552:0:0:0,-4.21442,-50.0237 0/1:23:19,4:19:762:4:164:-8.22621,0,-61.9792 0/0:19:19,0:19:755:0:0:0,-5.71957,-68.2702 0/0:13:13,0:13:519:0:0:0,-3.91339,-47.0577 0/1:29:21,8:21:807:8:328:-21.1605,0,-64.2069 dDocent_Contig_13322 45 . C T 101.576 . AB=0.175;ABP=39.7082;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=79;DPB=79;DPRA=2.95;EPP=20.3821;EPPR=157.185;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=313;QR=2827;RO=71;RPL=0;RPP=20.3821;RPPR=157.185;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=71;SRP=157.185;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:1:1,0:1:37:0:0:0,-0.30103,-3.69783 0/0:19:18,1:18:724:1:39:0,-1.82301,-61.5893 0/0:12:12,0:12:481:0:0:0,-3.61236,-43.6411 0/1:20:17,3:17:665:3:121:-5.25939,0,-54.1573 0/0:7:7,0:7:281:0:0:0,-2.10721,-25.6626 0/1:20:16,4:16:639:4:153:-8.1196,0,-51.8234 dDocent_Contig_13323 131 . C T 52.1238 . AB=0.133333;ABP=108.11;AC=3;AF=0.25;AN=12;AO=14;CIGAR=1X;DP=185;DPB=185;DPRA=0.8;EPP=33.4109;EPPR=374.332;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.785714;PAIREDR=0.888889;PAO=0;PQA=0;PQR=0;PRO=0;QA=457;QR=5700;RO=171;RPL=0;RPP=33.4109;RPPR=374.332;RPR=14;RUN=1;SAF=0;SAP=33.4109;SAR=14;SRF=0;SRP=374.332;SRR=171;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:26,1:26:861:1:34:0,-4.7289,-74.398 0/1:26:22,4:22:737:4:137:-4.84143,0,-58.8153 0/0:37:37,0:37:1236:0:0:0,-11.1381,-111.538 0/1:46:41,5:41:1376:5:171:-1.87935,0,-110.286 0/1:18:15,3:15:507:3:96:-3.53922,0,-40.5342 0/0:31:30,1:30:983:1:19:0,-7.43196,-86.8677 dDocent_Contig_13324 13 . T A 1056.62 . AB=0.151139;ABP=513.594;AC=6;AF=0.5;AN=12;AO=73;CIGAR=1X;DP=483;DPB=483;DPRA=0;EPP=161.528;EPPR=893.314;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.60274;PAIREDR=0.443902;PAO=0;PQA=0;PQR=0;PRO=0;QA=2891;QR=16528;RO=410;RPL=0;RPP=161.528;RPPR=893.314;RPR=73;RUN=1;SAF=73;SAP=161.528;SAR=0;SRF=410;SRP=893.314;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:45,9:45:1804:9:357:-16.2363,0,-146.311 0/1:65:58,7:58:2345:7:286:-6.54787,0,-191.629 0/1:70:61,9:61:2471:9:363:-11.962,0,-201.448 0/1:94:79,15:79:3188:15:594:-25.4987,0,-258.68 0/1:91:79,12:79:3189:12:481:-16.2467,0,-259.673 0/1:109:88,21:88:3531:21:810:-40.3925,0,-285 dDocent_Contig_13325 40 . C A 1098.13 . AB=0;ABP=0;AC=4;AF=0.333333;AN=12;AO=30;CIGAR=1X;DP=368;DPB=368;DPRA=0.177515;EPP=68.1545;EPPR=736.968;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1204;QR=13445;RO=338;RPL=0;RPP=68.1545;RPPR=736.968;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=338;SRP=736.968;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1170:0:0:0,-9.0309,-105.57 0/0:182:182,0:182:7271:0:0:0,-54.7875,-654.035 0/0:39:39,0:39:1560:0:0:0,-11.7402,-140.634 0/0:87:87,0:87:3444:0:0:0,-26.1896,-310.003 1/1:16:0,16:0:0:16:642:-58.1147,-4.81648,0 1/1:14:0,14:0:0:14:562:-50.9198,-4.21442,0 dDocent_Contig_13327 34 . G A 12228.5 . AB=0.764151;ABP=259.982;AC=7;AF=0.583333;AN=12;AO=387;CIGAR=1X;DP=490;DPB=490;DPRA=0;EPP=843.37;EPPR=226.672;GTI=0;LEN=1;MEANALT=1;MQM=59.9199;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.72093;PAIREDR=0.650485;PAO=0;PQA=0;PQR=0;PRO=0;QA=15235;QR=4170;RO=103;RPL=0;RPP=843.37;RPPR=226.672;RPR=387;RUN=1;SAF=387;SAP=843.37;SAR=0;SRF=103;SRP=226.672;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:66:3,63:3:123:63:2510:-214.584,-8.40319,0 0/1:75:13,62:13:526:62:2410:-194.486,0,-25.1092 0/1:85:24,61:24:973:61:2396:-190.207,0,-62.2788 0/1:83:12,71:12:491:71:2785:-225.789,0,-19.5555 0/1:61:16,45:16:648:45:1798:-142.82,0,-40.2907 0/1:120:35,85:35:1409:85:3336:-264.183,0,-90.9378 dDocent_Contig_13328 13 . G A 174.901 . AB=0.135922;ABP=121.598;AC=1;AF=0.0833333;AN=12;AO=24;CIGAR=1X;DP=1071;DPB=1071;DPRA=0.684211;EPP=55.1256;EPPR=2276.54;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.999045;PAO=0;PQA=0;PQR=0;PRO=0;QA=956;QR=41620;RO=1047;RPL=0;RPP=55.1256;RPPR=2276.54;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=1047;SRP=2276.54;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:226:226,0:226:8979:0:0:0,-68.0328,-807.59 0/0:193:193,0:193:7653:0:0:0,-58.0988,-688.378 0/1:103:89,14:89:3564:14:552:-19.013,0,-289.781 0/0:170:160,10:160:6382:10:404:0,-14.4562,-537.394 0/0:188:188,0:188:7424:0:0:0,-56.5936,-667.789 0/0:191:191,0:191:7618:0:0:0,-57.4967,-685.236 dDocent_Contig_13330 32 . C T 54.1866 . AB=0.173913;ABP=24.253;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=118;DPB=118;DPRA=1.21053;EPP=11.6962;EPPR=250.558;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=150;QR=4531;RO=114;RPL=0;RPP=11.6962;RPPR=250.558;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=114;SRP=250.558;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:959:0:0:0,-7.22472,-86.6122 0/0:32:32,0:32:1282:0:0:0,-9.63296,-115.648 0/0:24:24,0:24:944:0:0:0,-7.22472,-85.2578 0/1:23:19,4:19:746:4:150:-6.94151,0,-60.5309 0/0:5:5,0:5:193:0:0:0,-1.50515,-17.7373 0/0:10:10,0:10:407:0:0:0,-3.0103,-36.9906 dDocent_Contig_13331 21 . C G 53.6857 . AB=0.108108;ABP=101.724;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=262;DPB=262;DPRA=1.96809;EPP=20.3821;EPPR=554.564;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=320;QR=10148;RO=254;RPL=0;RPP=20.3821;RPPR=554.564;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=254;SRP=554.564;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:563:0:0:0,-4.21442,-51.0109 0/0:61:61,0:61:2447:0:0:0,-18.3628,-220.37 0/0:1:1,0:1:41:0:0:0,-0.30103,-4.09457 0/0:90:90,0:90:3578:0:0:0,-27.0927,-322.041 0/1:74:66,8:66:2628:8:320:-6.89108,0,-214.359 0/0:22:22,0:22:891:0:0:0,-6.62266,-80.4938 dDocent_Contig_13332 12 . T C 376.688 . AB=0.341463;ABP=11.961;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=177;DPB=177;DPRA=1.18919;EPP=35.5824;EPPR=352.617;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.933333;PAIREDR=0.496894;PAO=0;PQA=0;PQR=0;PRO=0;QA=611;QR=6462;RO=161;RPL=0;RPP=35.5824;RPPR=352.617;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=161;SRP=352.617;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:1044:0:0:0,-7.82678,-94.2522 0/0:29:29,0:29:1168:0:0:0,-8.72987,-105.396 0/0:11:11,0:11:447:0:0:0,-3.31133,-40.5859 0/0:45:45,0:45:1791:0:0:0,-13.5463,-161.408 0/0:25:24,1:24:963:1:41:0,-3.43118,-82.8756 0/1:41:26,14:26:1049:14:570:-39.1917,0,-82.2471 dDocent_Contig_13334 17 . T G 659.408 . AB=0.306122;ABP=35.0063;AC=5;AF=0.416667;AN=12;AO=30;CIGAR=1X;DP=108;DPB=108;DPRA=1.96;EPP=68.1545;EPPR=172.385;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.961538;PAO=0;PQA=0;PQR=0;PRO=0;QA=1143;QR=3049;RO=78;RPL=0;RPP=68.1545;RPPR=172.385;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=78;SRP=172.385;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:13:5,8:5:203:8:279:-21.5239,0,-14.7397 0/1:24:17,7:17:674:7:274:-17.8009,0,-53.7677 0/1:16:10,6:10:392:6:239:-17.0683,0,-30.8187 0/1:26:20,6:20:775:6:245:-14.6027,0,-62.2283 0/0:10:10,0:10:393:0:0:0,-3.0103,-35.7264 0/1:19:16,3:16:612:3:106:-4.16632,0,-49.6841 dDocent_Contig_13335 36 . A G 267.479 . AB=0.145985;ABP=152.144;AC=3;AF=0.25;AN=12;AO=22;CIGAR=1X;DP=289;DPB=289;DPRA=0.767544;EPP=50.7827;EPPR=582.793;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.318182;PAIREDR=0.340824;PAO=0;PQA=0;PQR=0;PRO=0;QA=883;QR=10646;RO=267;RPL=0;RPP=50.7827;RPPR=582.793;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=267;SRP=582.793;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:36,2:36:1432:2:82:0,-3.65946,-121.349 0/1:39:33,6:33:1326:6:241:-10.3265,0,-107.862 0/1:35:30,5:30:1205:5:204:-8.20798,0,-98.1901 0/1:63:54,9:54:2140:9:356:-13.4352,0,-173.809 0/0:48:48,0:48:1924:0:0:0,-14.4494,-173.36 0/0:66:66,0:66:2619:0:0:0,-19.868,-235.85 dDocent_Contig_13336 20 . C A 465.51 . AB=0.346154;ABP=13.7006;AC=2;AF=0.166667;AN=12;AO=18;CIGAR=1X;DP=154;DPB=154;DPRA=1.01961;EPP=42.0968;EPPR=298.331;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.830882;PAO=0;PQA=0;PQR=0;PRO=0;QA=719;QR=5418;RO=136;RPL=0;RPP=42.0968;RPPR=298.331;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=136;SRP=298.331;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1082:0:0:0,-8.12781,-97.6625 0/0:44:44,0:44:1747:0:0:0,-13.2453,-157.449 0/0:7:7,0:7:283:0:0:0,-2.10721,-25.8425 0/0:24:24,0:24:927:0:0:0,-7.22472,-83.7178 0/1:20:16,4:16:647:4:155:-8.30266,0,-52.5431 0/1:32:18,14:18:732:14:564:-41.4702,0,-56.5708 dDocent_Contig_13337 98 . N C 803.473 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=26;CIGAR=2X;DP=26;DPB=26.5;DPRA=0;EPP=59.4686;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0.923077;PAIREDR=0;PAO=1;PQA=32;PQR=0;PRO=0;QA=880;QR=0;RO=0;RPL=26;RPP=59.4686;RPPR=0;RPR=0;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:4:0,4:0:0:4:138:-12.7604,-1.20412,0 1|1:10:0,10:0:0:10:337:-30.6565,-3.0103,0 1|1:12:0,12:0:0:12:405:-36.4532,-3.61236,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_13338 11 . A C 3839.27 . AB=0.202643;ABP=700.369;AC=6;AF=0.5;AN=12;AO=184;CIGAR=1X;DP=908;DPB=908;DPRA=0;EPP=402.561;EPPR=1570.81;GTI=0;LEN=1;MEANALT=1.33333;MQM=59.9511;MQMR=59.6856;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0217391;PAIREDR=0.0858726;PAO=0;PQA=0;PQR=0;PRO=0;QA=7412;QR=28916;RO=722;RPL=0;RPP=402.561;RPPR=1570.81;RPR=184;RUN=1;SAF=184;SAP=402.561;SAR=0;SRF=722;SRP=1570.81;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:120:100,19:100:4015:19:762:-32.6964,0,-321.559 0/1:177:158,19:158:6334:19:762:-15.6173,0,-515.665 0/1:113:102,11:102:4093:11:435:-5.48555,0,-334.056 0/1:173:139,33:139:5549:33:1341:-68.7594,0,-445.412 0/1:116:69,47:69:2758:47:1882:-134.659,0,-213.414 0/1:209:154,55:154:6167:55:2230:-137.931,0,-491.87 dDocent_Contig_13340 16 . T A 15232.9 . AB=0.040153;ABP=1924.21;AC=0;AF=0;AN=12;AO=42;CIGAR=4M1X2M2X2M1X;DP=1203;DPB=1203.33;DPRA=0;EPP=94.2121;EPPR=532.987;GTI=0;LEN=1;MEANALT=14.8;MQM=39.119;MQMR=58.1429;NS=6;NUMALT=5;ODDS=0;PAIRED=0.97619;PAIREDR=0.821429;PAO=0.25;PQA=8.5;PQR=0;PRO=0;QA=1635;QR=9671;RO=252;RPL=0;RPP=94.2121;RPPR=550.221;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=250;SRP=532.987;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:187:41,26,11,7,14,70:41:1562:26,11,7,14,70:1022,421,272,534,2793:-187.288,-138.438,-258.366,-167.355,-233.92,-291.801,-178.866,-245.431,-274.349,-304.516,-158.923,-225.488,-254.406,-265.917,-282.465,0,-66.579,-95.4916,-107.003,-87.0589,-106.694 0|0:212:54,14,19,1,13,70:54:2062:14,19,1,13,70:551,738,39,503,2745:-182.212,-165.531,-328.518,-142.054,-276.321,-303.539,-195.63,-329.895,-306.42,-362.531,-160.955,-295.221,-271.746,-325.32,-324.245,0,-134.271,-110.794,-164.368,-129.695,-146.134 0|0:157:48,8,11,0,15,62:48:1862:8,11,0,15,62:316,433,0,588,2471:-167.222,-162.821,-313.376,-148.725,-282.839,-298.379,-181.672,-315.784,-301.69,-334.636,-136.93,-271.044,-256.949,-289.895,-285.38,0,-134.122,-120.025,-152.97,-108.23,-134.306 0|0:263:64,0,16,28,26,103:64:2451:0,16,28,26,103:0,624,1090,1026,4087:-273.837,-293.103,-494.013,-245.497,-446.407,-441.591,-209.936,-410.847,-363.241,-402.418,-214.496,-415.407,-367.8,-332.241,-407.58,0,-200.909,-153.304,-117.746,-122.304,-169.903 0|0:141:24,0,8,1,12,86:24:925:0,8,1,12,86:0,298,40,473,3437:-246.422,-253.647,-327.334,-231.039,-304.726,-302.318,-253.41,-327.097,-304.49,-326.796,-223.258,-296.945,-274.337,-296.708,-293.333,0,-73.7185,-51.1073,-73.4846,-43.3298,-47.8299 0|0:243:21,2,9,5,29,163:21:809:2,9,5,29,163:77,329,194,1151,6471:-477.529,-479.157,-544.49,-459.121,-520.362,-522.347,-469.067,-530.308,-510.272,-533.496,-410.706,-471.947,-451.911,-461.857,-467.911,-7.18872,-68.4427,-48.4057,-58.3506,0,-24.0679 dDocent_Contig_13341 107 . N T 70.2696 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=74;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:74:-7.02588,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13342 20 . C A 39.0264 . AB=0.121212;ABP=44.1367;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=286;DPB=286;DPRA=1.69811;EPP=24.725;EPPR=602.337;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.6;PAIREDR=0.576087;PAO=0;PQA=0;PQR=0;PRO=0;QA=386;QR=11052;RO=276;RPL=0;RPP=24.725;RPPR=602.337;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=276;SRP=602.337;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:29,4:29:1161:4:163:-5.12444,0,-94.8362 0/0:68:66,2:66:2646:2:82:0,-12.6904,-230.485 0/0:56:56,0:56:2224:0:0:0,-16.8577,-200.329 0/0:79:75,4:75:3019:4:141:0,-10.7491,-258.761 0/0:22:22,0:22:858:0:0:0,-6.62266,-77.5212 0/0:28:28,0:28:1144:0:0:0,-8.42884,-103.235 dDocent_Contig_13343 22 . C T 308.115 . AB=0.3125;ABP=7.89611;AC=3;AF=0.25;AN=12;AO=10;CIGAR=1X;DP=191;DPB=191;DPRA=0.247059;EPP=24.725;EPPR=396.047;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=401;QR=7160;RO=181;RPL=0;RPP=24.725;RPPR=396.047;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=181;SRP=396.047;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:8:8,0:8:318:0:0:0,-2.40824,-28.9861 0/0:10:10,0:10:389:0:0:0,-3.0103,-35.361 0/1:16:11,5:11:447:5:199:-13.4715,0,-35.7694 1/1:5:0,5:0:0:5:202:-18.5619,-1.50515,0 0/0:49:49,0:49:1936:0:0:0,-14.7505,-174.446 0/0:103:103,0:103:4070:0:0:0,-31.0061,-366.296 dDocent_Contig_13344 7 . A C 449.002 . AB=0.295775;ABP=28.7315;AC=5;AF=0.416667;AN=12;AO=22;CIGAR=1X2M1X;DP=85;DPB=85;DPRA=0;EPP=50.7827;EPPR=139.813;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=847;QR=2398;RO=63;RPL=0;RPP=50.7827;RPPR=139.813;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=63;SRP=139.813;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:9:8,1:8:304:1:39:-1.18729,0,-25.0101 0|1:18:16,2:16:616:2:78:-1.98493,0,-50.3611 0|0:14:13,1:13:503:1:39:0,-0.317855,-41.722 0|1:17:12,5:12:450:5:195:-12.8067,0,-35.7263 0|1:11:4,7:4:156:7:265:-20.8992,0,-11.106 0|1:16:10,6:10:369:6:231:-16.3416,0,-28.7385 dDocent_Contig_13346 14 . A T 12759.9 . AB=0.525092;ABP=7.47816;AC=6;AF=0.5;AN=12;AO=429;CIGAR=1X;DP=817;DPB=817;DPRA=0;EPP=934.572;EPPR=845.542;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.97669;PAIREDR=0.963918;PAO=0;PQA=0;PQR=0;PRO=0;QA=17028;QR=15438;RO=388;RPL=0;RPP=934.572;RPPR=845.542;RPR=429;RUN=1;SAF=429;SAP=934.572;SAR=0;SRF=388;SRP=845.542;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:97:24,73:24:936:73:2887:-230.728,0,-55.3466 0/1:139:61,78:61:2413:78:3049:-232.66,0,-175.48 0/1:76:30,46:30:1217:46:1837:-142.661,0,-86.9221 0/1:194:74,120:74:2955:120:4776:-371.339,0,-207.643 0/1:107:65,42:65:2599:42:1684:-119.573,0,-201.831 0/1:204:134,70:134:5318:70:2795:-190.25,0,-417.065 dDocent_Contig_13347 7 . A G 240.712 . AB=0.141463;ABP=231.905;AC=4;AF=0.333333;AN=12;AO=31;CIGAR=1X;DP=291;DPB=291;DPRA=1.21951;EPP=70.3259;EPPR=567.593;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.806452;PAIREDR=0.784615;PAO=0;PQA=0;PQR=0;PRO=0;QA=1046;QR=9914;RO=260;RPL=0;RPP=70.3259;RPPR=567.593;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=260;SRP=567.593;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:59:49,10:49:1880:10:333:-12.5242,0,-151.688 0/1:57:48,9:48:1799:9:331:-12.9781,0,-145.005 0/1:26:23,3:23:878:3:89:-0.475648,0,-71.5102 0/0:45:43,2:43:1649:2:44:0,-9.36739,-144.496 0/0:41:41,0:41:1589:0:0:0,-12.3422,-143.276 0/1:63:56,7:56:2119:7:249:-3.78734,0,-171.972 dDocent_Contig_13348 8 . C T 2916.95 . AB=0.609756;ABP=20.1702;AC=3;AF=0.25;AN=12;AO=102;CIGAR=1X;DP=378;DPB=378;DPRA=0.505319;EPP=224.5;EPPR=602.337;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3916;QR=10631;RO=276;RPL=0;RPP=224.5;RPPR=602.337;RPR=102;RUN=1;SAF=102;SAP=224.5;SAR=0;SRF=276;SRP=602.337;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:24,2:24:930:2:78:0,-0.423307,-76.6129 0/1:60:25,35:25:961:35:1342:-103.004,0,-68.7412 0/1:55:14,41:14:540:41:1590:-126.809,0,-32.3885 0/1:49:25,24:25:969:24:906:-67.104,0,-72.7729 0/0:95:95,0:95:3666:0:0:0,-28.5978,-330.05 0/0:93:93,0:93:3565:0:0:0,-27.9958,-320.974 dDocent_Contig_13349 111 . T A 68.8255 . AB=0.166667;ABP=37.7539;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=116;DPB=116;DPRA=2.25;EPP=16.0391;EPPR=241.872;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=210;QR=3670;RO=110;RPL=0;RPP=16.0391;RPPR=241.872;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=241.872;SRR=110;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:5:5,0:5:155:0:0:0,-1.50515,-14.2569 0/0:8:8,0:8:257:0:0:0,-2.40824,-23.4436 0/0:5:5,0:5:173:0:0:0,-1.50515,-15.9102 0/0:24:24,0:24:785:0:0:0,-7.22472,-70.9549 0/1:36:30,6:30:1007:6:210:-8.40538,0,-80.0974 0/0:38:38,0:38:1293:0:0:0,-11.4391,-116.671 dDocent_Contig_13351 72 . G A 36.7554 . AB=0.25;ABP=7.35324;AC=1;AF=0.1;AN=10;AO=3;CIGAR=1X;DP=705;DPB=705;DPRA=1;EPP=9.52472;EPPR=1527.38;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=121;QR=25983;RO=702;RPL=3;RPP=9.52472;RPPR=1527.38;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=702;SRP=1527.38;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:6:6,0:6:196:0:0:0,-1.80618,-17.9525 0/1:8:6,2:6:229:2:81:-5.27749,0,-18.5674 ./.:.:.:.:.:.:.:. 0/0:46:46,0:46:1727:0:0:0,-13.8474,-155.683 0/0:371:371,0:371:13751:0:0:0,-111.682,-1237.01 0/0:274:273,1:273:10080:1:40:0,-78.4865,-902.91 dDocent_Contig_13352 74 . G T 63.1863 . AB=0.181818;ABP=32.0291;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=150;DPB=150;DPRA=1.20455;EPP=12.7819;EPPR=309.188;GTI=0;LEN=1;MEANALT=1.25;MQM=55.75;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.625;PAIREDR=0.808511;PAO=0;PQA=0;PQR=0;PRO=0;QA=300;QR=4772;RO=141;RPL=2;RPP=7.35324;RPPR=309.188;RPR=6;RUN=1;SAF=7;SAP=12.7819;SAR=1;SRF=141;SRP=309.188;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:18,4:18:614:4:156:-6.57571,0,-48.9594 0/0:22:22,0:22:754:0:0:0,-6.62266,-68.1787 0/0:22:22,0:22:727:0:0:0,-6.62266,-65.7394 0/0:43:42,1:42:1404:1:39:0,-9.04772,-122.756 0/1:11:9,2:9:311:2:66:-2.95685,0,-25.014 0/0:30:28,1:28:962:1:39:0,-5.12813,-83.0859 dDocent_Contig_13353 10 . A C 748.26 . AB=0.2;ABP=151.539;AC=5;AF=0.416667;AN=12;AO=38;CIGAR=1X;DP=207;DPB=207;DPRA=2.23529;EPP=85.5263;EPPR=367.818;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.605263;PAIREDR=0.583333;PAO=0;PQA=0;PQR=0;PRO=0;QA=1537;QR=6662;RO=168;RPL=0;RPP=85.5263;RPPR=367.818;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=168;SRP=367.818;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:32,3:32:1270:3:122:-0.836443,0,-104.039 0/0:17:17,0:17:669:0:0:0,-5.11751,-60.5359 0/1:28:22,6:22:867:6:240:-13.5457,0,-69.9124 0/1:40:28,12:28:1114:12:480:-31.5096,0,-88.5059 0/1:44:36,8:36:1424:8:327:-16.5548,0,-115.167 0/1:43:33,9:33:1318:9:368:-20.4327,0,-105.836 dDocent_Contig_13354 8 . C T 13372.5 . AB=0.102326;ABP=889.001;AC=2;AF=0.166667;AN=12;AO=66;CIGAR=1X1M1X2M;DP=645;DPB=645;DPRA=0;EPP=146.327;EPPR=163.699;GTI=0;LEN=1;MEANALT=4.83333;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.986486;PAO=0;PQA=0;PQR=0;PRO=0;QA=2524;QR=2881;RO=74;RPL=0;RPP=146.327;RPPR=163.699;RPR=66;RUN=1;SAF=66;SAP=146.327;SAR=0;SRF=74;SRP=163.699;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:87:16,2,19,2,46:16:604:2,19,2,46:77,732,80,1735:-147.73,-146.224,-195.12,-92.6401,-135.816,-136.419,-145.956,-189.132,-135.548,-194.852,-10.4112,-53.5863,0,-53.318,-46.0617 0|0:133:12,21,30,8,60:12:473:21,30,8,60:804,1197,326,2383:-251.421,-189.057,-221.652,-156.452,-129.393,-186.338,-228.138,-201.078,-168.473,-264.646,-59.667,-32.6093,0,-71.6875,-80.5219 0|0:78:16,7,10,3,42:16:633:7,10,3,42:271,400,123,1640:-129.973,-112.528,-162.518,-101.839,-131.675,-150.926,-124.637,-154.472,-143.784,-175.831,0,-29.8359,-19.1454,-41.9425,-39.4527 0|0:130:27,14,19,0,70:27:1051:14,19,0,70:537,749,0,2763:-219.201,-183.253,-265.414,-165.707,-208.007,-246.363,-227.328,-269.629,-252.083,-313.705,0,-42.3015,-24.7534,-86.3767,-65.3046 1|0:117:0,11,7,0,92:0:0:11,7,0,92:415,273,0,3625:-331.69,-297.68,-294.369,-309.252,-275.242,-307.145,-331.69,-297.68,-309.252,-331.69,-34.0164,0,-11.5712,-34.0164,-6.32161 1|0:100:3,11,8,0,76:3:120:11,8,0,76:420,319,0,2977:-268.453,-234.898,-241.472,-243.084,-218.512,-250.562,-269.356,-244.784,-252.97,-279.242,-24.5767,0,-8.18255,-34.4657,-11.5874 dDocent_Contig_13355 1 . N G 96.1056 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=103;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:103:-9.61002,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13356 65 . G A 1769.41 . AB=0;ABP=0;AC=5;AF=0.416666;AN=12;AO=43;CIGAR=1X4M;DP=127;DPB=127;DPRA=0.948529;EPP=96.3836;EPPR=159.356;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1671;QR=2692;RO=72;RPL=43;RPP=96.3836;RPPR=159.356;RPR=0;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=72;SRP=159.356;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:23:22,0,0:22:831:0,0:0,0:0,-6.62266,-74.7132,-6.62266,-74.7132,-74.7132 0|0:14:14,0,0:14:513:0,0:0,0:0,-4.21442,-46.5038,-4.21442,-46.5038,-46.5038 0|1:16:6,9,0:6:211:9,0:352,0:-27.1529,0,-14.444,-28.9591,-17.1533,-46.1142 0|0:31:30,0,0:30:1137:0,0:0,0:0,-9.0309,-102.54,-9.0309,-102.54,-102.54 1|1:21:0,0,21:0:0:0,21:0,819:-74.0217,-74.0217,-74.0217,-6.32163,-6.32163,0 1|1:22:0,0,22:0:0:0,22:0,852:-76.9881,-76.9881,-76.9881,-6.62266,-6.62266,0 dDocent_Contig_13357 9 . T C 261.654 . AB=0.21875;ABP=46.9826;AC=3;AF=0.25;AN=12;AO=14;CIGAR=1X;DP=137;DPB=137;DPRA=0.876712;EPP=33.4109;EPPR=270.101;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.98374;PAO=0;PQA=0;PQR=0;PRO=0;QA=538;QR=4697;RO=123;RPL=0;RPP=33.4109;RPPR=270.101;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=123;SRP=270.101;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:7,5:7:269:5:187:-13.5801,0,-20.9624 0/1:10:9,1:9:339:1:39:-0.886264,0,-27.8527 0/0:10:10,0:10:389:0:0:0,-3.0103,-35.3684 0/0:40:40,0:40:1531:0:0:0,-12.0412,-138.064 0/0:23:23,0:23:887:0:0:0,-6.92369,-80.15 0/1:42:34,8:34:1282:8:312:-15.8017,0,-103.026 dDocent_Contig_13362 18 . C A 8359.71 . AB=0.189247;ABP=393.039;AC=1;AF=0.0833333;AN=12;AO=88;CIGAR=3M1X2M;DP=1000;DPB=988.333;DPRA=0;EPP=194.1;EPPR=1004.51;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.844075;PAO=0;PQA=0;PQR=0;PRO=0;QA=3438;QR=18851;RO=481;RPL=0;RPP=194.1;RPPR=1047.49;RPR=88;RUN=1;SAF=88;SAP=194.1;SAR=0;SRF=476;SRP=1004.51;SRR=5;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:126:85,0,40,0:85:3341:0,40,0:0,1073,0:-54.8268,-80.4144,-355.299,0,-275.08,-263.038,-80.4144,-355.299,-275.08,-355.299 0|0:100:56,0,44,0:56:2196:0,44,0:0,1696,0:-122.766,-139.624,-320.205,0,-180.969,-167.724,-139.624,-320.205,-180.969,-320.205 0|1:131:79,0,24,27:79:3078:0,24,27:0,903,1019:-59.7099,-83.4912,-336.453,-10.0714,-263.034,-255.809,0,-252.965,-179.547,-244.837 0|0:334:190,0,82,61:190:7431:0,82,61:0,3028,2419:-188.287,-245.482,-856.422,0,-610.932,-586.247,-46.3592,-657.311,-411.821,-638.948 0|0:113:32,36,43,0:32:1262:36,43,0:1430,1693,0:-143.269,-35.1784,-128.175,-13.8906,0,-104.779,-152.902,-139.012,-117.723,-256.735 0|0:196:39,34,110,0:39:1543:34,110,0:1327,3661,0:-278.335,-180.99,-297.752,0,-17.9128,-93.8693,-290.075,-307.987,-126.983,-417.066 dDocent_Contig_13363 11 . A G 844.148 . AB=0.140143;ABP=476.551;AC=2;AF=0.166667;AN=12;AO=60;CIGAR=1X;DP=1410;DPB=1410;DPRA=0.955617;EPP=133.299;EPPR=2932.33;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.933333;PAIREDR=0.990363;PAO=0;PQA=0;PQR=0;PRO=0;QA=2394;QR=54225;RO=1349;RPL=0;RPP=133.299;RPPR=2932.33;RPR=60;RUN=1;SAF=60;SAP=133.299;SAR=0;SRF=1349;SRP=2932.33;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:217:217,0:217:8718:0:0:0,-65.3235,-784.09 0/0:268:267,1:267:10721:1:18:0,-78.8761,-962.356 0/0:261:261,0:261:10480:0:0:0,-78.5688,-942.464 0/0:243:243,0:243:9797:0:0:0,-73.1503,-881.059 0/1:131:100,30:100:3991:30:1209:-69.6277,0,-319.707 0/1:290:261,29:261:10518:29:1167:-18.0089,0,-858.584 dDocent_Contig_13364 136 . G T 564.858 . AB=0.294118;ABP=40.564;AC=4;AF=0.333333;AN=12;AO=31;CIGAR=1X1M1X2M1X;DP=145;DPB=145;DPRA=1.00833;EPP=70.3259;EPPR=246.215;GTI=0;LEN=1;MEANALT=1.4;MQM=43.2903;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.419355;PAIREDR=0.982143;PAO=0;PQA=0;PQR=0;PRO=0;QA=1192;QR=4102;RO=112;RPL=0;RPP=70.3259;RPPR=246.215;RPR=31;RUN=1;SAF=0;SAP=70.3259;SAR=31;SRF=0;SRP=246.215;SRR=112;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:15:10,5:10:369:5:182:-11.1865,0,-29.0413 0|1:35:20,14:20:737:14:543:-30.9431,0,-56.0316 0|1:23:19,4:19:682:4:155:-5.45938,0,-54.779 0|1:29:21,7:21:779:7:273:-16.1187,0,-61.6129 0|0:24:24,0:24:886:0:0:0,-7.22472,-80.0502 0|0:19:18,1:18:649:1:39:0,-1.82301,-54.8356 dDocent_Contig_13366 10 . A G 39.7848 . AB=0.137931;ABP=36.0317;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=220;DPB=220;DPRA=1.12057;EPP=13.8677;EPPR=469.877;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.632558;PAO=0;PQA=0;PQR=0;PRO=0;QA=195;QR=8516;RO=215;RPL=0;RPP=13.8677;RPPR=469.877;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=215;SRP=469.877;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:34,0:34:1352:0:0:0,-10.235,-121.938 0/0:50:49,1:49:1959:1:41:0,-10.9569,-172.415 0/1:29:25,4:25:972:4:154:-5.50131,0,-79.0485 0/0:40:40,0:40:1569:0:0:0,-12.0412,-141.451 0/0:32:32,0:32:1271:0:0:0,-9.63296,-114.657 0/0:35:35,0:35:1393:0:0:0,-10.536,-125.627 dDocent_Contig_13367 25 . G C 1510.43 . AB=0.232639;ABP=181.825;AC=4;AF=0.4;AN=10;AO=67;CIGAR=1X;DP=405;DPB=405;DPRA=0.615385;EPP=148.499;EPPR=736.968;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994083;PAO=0;PQA=0;PQR=0;PRO=0;QA=2708;QR=13410;RO=338;RPL=0;RPP=148.499;RPPR=736.968;RPR=67;RUN=1;SAF=67;SAP=148.499;SAR=0;SRF=338;SRP=736.968;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:98:73,25:73:2863:25:1003:-61.0652,0,-228.274 0/1:107:97,10:97:3851:10:407:-4.78018,0,-314.379 0/1:52:32,20:32:1224:20:812:-57.7405,0,-94.7675 0/0:117:117,0:117:4717:0:0:0,-35.2205,-424.417 ./.:.:.:.:.:.:.:. 0/1:31:19,12:19:755:12:486:-34.7582,0,-58.939 dDocent_Contig_13369 12 . T C 686.151 . AB=0.178404;ABP=194.355;AC=4;AF=0.333333;AN=12;AO=45;CIGAR=1X;DP=342;DPB=342;DPRA=0;EPP=100.727;EPPR=639.281;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8956;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.760943;PAO=0;PQA=0;PQR=0;PRO=0;QA=1819;QR=11683;RO=297;RPL=0;RPP=100.727;RPPR=647.938;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=296;SRP=639.281;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:23,5:23:920:5:202:-10.133,0,-74.6792 0/1:74:60,14:60:2351:14:569:-29.276,0,-189.485 0/1:45:38,7:38:1475:7:279:-11.9345,0,-119.452 0/0:68:63,5:63:2505:5:202:0,-1.90854,-206.015 0/0:61:59,2:59:2324:2:78:0,-10.9601,-201.919 0/1:66:54,12:54:2108:12:489:-24.4933,0,-170.049 dDocent_Contig_13370 11 . T G 367.265 . AB=0.5;ABP=3.0103;AC=1;AF=0.1;AN=10;AO=14;CIGAR=1X;DP=90;DPB=90;DPRA=1.63953;EPP=33.4109;EPPR=168.042;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=548;QR=2945;RO=76;RPL=0;RPP=33.4109;RPPR=168.042;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=76;SRP=168.042;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:3:3,0:3:108:0:0:0,-0.90309,-10.0707 0/0:7:7,0:7:274:0:0:0,-2.10721,-25.0281 ./.:.:.:.:.:.:.:. 0/0:21:20,1:20:770:1:39:0,-2.42507,-65.7224 0/1:26:13,13:13:513:13:509:-38.3284,0,-38.6904 0/0:33:33,0:33:1280:0:0:0,-9.93399,-115.482 dDocent_Contig_13371 16 . T C 631.789 . AB=0.352941;ABP=15.7837;AC=1;AF=0.0833333;AN=12;AO=29;CIGAR=1X;DP=330;DPB=330;DPRA=1.64;EPP=42.621;EPPR=258.839;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.724138;PAIREDR=0.52;PAO=0;PQA=0;PQR=0;PRO=0;QA=1146;QR=11218;RO=300;RPL=0;RPP=65.983;RPPR=654.452;RPR=29;RUN=1;SAF=26;SAP=42.621;SAR=3;SRF=244;SRP=258.839;SRR=56;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:62:62,0:62:2298:0:0:0,-18.6639,-207.035 0/0:85:81,4:81:3054:4:162:0,-10.6208,-260.058 0/0:52:50,1:50:1860:1:41:0,-11.4977,-163.721 0/1:68:44,24:44:1641:24:943:-64.7018,0,-127.487 0/0:16:16,0:16:612:0:0:0,-4.81648,-55.4163 0/0:47:47,0:47:1753:0:0:0,-14.1484,-158.019 dDocent_Contig_13372 16 . C T 260.275 . AB=0;ABP=0;AC=4;AF=0.333333;AN=12;AO=7;CIGAR=1X;DP=81;DPB=81;DPRA=0.189189;EPP=18.2106;EPPR=163.699;GTI=0;LEN=1;MEANALT=1;MQM=59.7143;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=272;QR=2948;RO=74;RPL=0;RPP=18.2106;RPPR=163.699;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=74;SRP=163.699;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:832:0:0:0,-6.32163,-75.1919 0/0:29:29,0:29:1170:0:0:0,-8.72987,-105.578 0/0:15:15,0:15:581:0:0:0,-4.51545,-52.6228 0/0:9:9,0:9:365:0:0:0,-2.70927,-33.2151 1/1:6:0,6:0:0:6:231:-21.1544,-1.80618,0 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 dDocent_Contig_13374 62 . G A 930.557 . AB=0.388889;ABP=12.6613;AC=4;AF=0.5;AN=8;AO=35;CIGAR=1X;DP=90;DPB=90;DPRA=0;EPP=79.0118;EPPR=122.441;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1401;QR=2164;RO=55;RPL=35;RPP=79.0118;RPPR=122.441;RPR=0;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=55;SRP=122.441;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:8,4:8:324:4:161:-11.2625,0,-25.9166 0/1:21:17,4:17:655:4:163:-8.7368,0,-52.9502 0/1:33:13,20:13:503:20:803:-62.6529,0,-35.6773 0/1:24:17,7:17:682:7:274:-17.8014,0,-54.4857 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13375 75 . C A 146.316 . AB=0;ABP=0;AC=2;AF=0.2;AN=10;AO=4;CIGAR=1X;DP=74;DPB=74;DPRA=0.228571;EPP=11.6962;EPPR=155.013;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=3.38813e-21;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=154;QR=2674;RO=70;RPL=4;RPP=11.6962;RPPR=155.013;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=70;SRP=155.013;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:512:0:0:0,-4.21442,-46.4148 0/0:17:17,0:17:646:0:0:0,-5.11751,-58.4744 0/0:25:25,0:25:966:0:0:0,-7.52575,-87.2344 0/0:14:14,0:14:550:0:0:0,-4.21442,-49.8419 ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:154:-14.2336,-1.20412,0 dDocent_Contig_13376 36 . A T 16342.5 . AB=0.317343;ABP=81.5439;AC=7;AF=0.583333;AN=12;AO=565;CIGAR=1X;DP=785;DPB=785;DPRA=5.61481;EPP=1229.89;EPPR=480.734;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.99823;PAIREDR=0.968182;PAO=0;PQA=0;PQR=0;PRO=0;QA=19376;QR=8713;RO=220;RPL=0;RPP=1229.89;RPPR=480.734;RPR=565;RUN=1;SAF=565;SAP=1229.89;SAR=0;SRF=220;SRP=480.734;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:57:40,17:40:1597:17:596:-36.8057,0,-126.8 0/1:88:71,17:71:2849:17:607:-28.4667,0,-230.027 0/1:126:74,52:74:2939:52:1777:-122.266,0,-226.683 0/0:27:27,0:27:1072:0:0:0,-8.12781,-96.7704 1/1:246:3,243:3:118:243:8280:-734.186,-63.0512,0 1/1:241:5,236:5:138:236:8116:-717.748,-59.8644,0 dDocent_Contig_13377 9 . G A 1185.87 . AB=0.0508475;ABP=106.394;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=2X;DP=128;DPB=128;DPRA=0;EPP=9.52472;EPPR=170.214;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.987013;PAO=0;PQA=0;PQR=0;PRO=0;QA=118;QR=3016;RO=77;RPL=0;RPP=9.52472;RPPR=170.214;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=77;SRP=170.214;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:15:8,0,6:8:313:0,6:0,244:-17.7411,-20.1494,-45.879,0,-25.7459,-23.9398 0|0:35:14,1,20:14:547:1,20:40,779:-59.7916,-60.7105,-105.38,0,-41.6653,-38.9404 0|0:9:3,0,6:3:116:0,6:0,242:-19.4481,-20.3511,-29.8736,0,-9.91431,-8.10813 0|0:20:13,0,7:13:509:0,7:0,281:-19.6416,-23.555,-65.4022,0,-42.2448,-40.1376 0|1:24:20,2,1:20:779:2,1:78,41:-0.383862,0,-63.4083,-3.0212,-60.6302,-66.741 0|0:25:19,0,5:19:752:0,5:0,204:-11.1848,-16.9044,-78.7987,0,-61.9641,-60.459 dDocent_Contig_13378 28 . A C 481.08 . AB=0.252874;ABP=49.1603;AC=4;AF=0.333333;AN=12;AO=22;CIGAR=1X;DP=185;DPB=185;DPRA=0.443878;EPP=50.7827;EPPR=356.96;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=889;QR=6474;RO=163;RPL=0;RPP=50.7827;RPPR=356.96;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=163;SRP=356.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:13:10,3:10:397:3:116:-6.90212,0,-32.1751 0/1:15:12,3:12:481:3:123:-6.94934,0,-39.1225 0/1:37:24,13:24:970:13:528:-36.7284,0,-76.461 0/1:22:19,3:19:751:3:122:-4.74983,0,-61.2884 0/0:47:47,0:47:1840:0:0:0,-14.1484,-165.802 0/0:51:51,0:51:2035:0:0:0,-15.3525,-183.337 dDocent_Contig_13379 9 . G A 406.312 . AB=0.636364;ABP=6.56362;AC=1;AF=0.1;AN=10;AO=14;CIGAR=1X;DP=104;DPB=104;DPRA=1.07317;EPP=33.4109;EPPR=198.443;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=539;QR=3442;RO=90;RPL=0;RPP=33.4109;RPPR=198.443;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=90;SRP=198.443;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:890:0:0:0,-6.92369,-80.4196 0/1:22:8,14:8:304:14:539:-42.2328,0,-21.0954 0/0:22:22,0:22:842:0:0:0,-6.62266,-76.1013 0/0:36:36,0:36:1367:0:0:0,-10.8371,-123.315 ./.:.:.:.:.:.:.:. 0/0:1:1,0:1:39:0:0:0,-0.30103,-3.89656 dDocent_Contig_13381 209 . N G 68.3772 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=72;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:72:-6.83664,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13382 8 . C T 1808.35 . AB=0.0625;ABP=242.415;AC=0;AF=0;AN=12;AO=9;CIGAR=3M1X14M;DP=240;DPB=240.389;DPRA=0;EPP=22.5536;EPPR=102.898;GTI=0;LEN=1;MEANALT=12.6667;MQM=60;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=345;QR=1787;RO=46;RPL=0;RPP=22.5536;RPPR=102.898;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=46;SRP=102.898;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:25:2,7,1,1,0,0,0,0,3,0:2:79:7,1,1,0,0,0,0,3,0:257,37,39,0,0,0,0,120,0:-23.7837,-3.3859,-7.78068,-21.3592,-6.86185,-27.5603,-21.1794,-6.68182,-24.6551,-27.3807,-24.3858,-9.88789,-27.8614,-27.6817,-30.8879,-24.3858,-9.88789,-27.8614,-27.6817,-30.8879,-30.8879,-24.3858,-9.88789,-27.8614,-27.6817,-30.8879,-30.8879,-30.8879,-24.3858,-9.88789,-27.8614,-27.6817,-30.8879,-30.8879,-30.8879,-30.8879,-14.4976,0,-17.9735,-17.7937,-21.0001,-21.0001,-21.0001,-21.0001,-20.097,-24.3858,-9.88789,-27.8614,-27.6817,-30.8879,-30.8879,-30.8879,-30.8879,-21.0001,-30.8879 0|0:45:10,1,2,4,0,3,0,0,11,0:10:384:1,2,4,0,3,0,0,11,0:36,69,155,0,116,0,0,444,0:-33.5981,-33.6718,-64.8914,-31.0066,-59.59,-61.9246,-23.8743,-52.4583,-49.7927,-54.1909,-36.6084,-65.1924,-62.5267,-55.395,-68.1292,-27.0803,-55.6642,-52.9986,-45.8668,-58.601,-57.6979,-36.6084,-65.1924,-62.5267,-55.395,-68.1292,-58.601,-68.1292,-36.6084,-65.1924,-62.5267,-55.395,-68.1292,-58.601,-68.1292,-68.1292,0,-28.5858,-25.9204,-18.7877,-31.5226,-21.9938,-31.5226,-31.5226,-28.2112,-36.6084,-65.1924,-62.5267,-55.395,-68.1292,-58.601,-68.1292,-68.1292,-31.5226,-68.1292 0|0:47:4,4,3,1,3,2,0,0,23,3:4:158:4,3,1,3,2,0,0,23,3:154,113,34,117,78,0,0,898,116:-72.6127,-61.1732,-72.9721,-64.5577,-64.9172,-76.6575,-71.0598,-71.4193,-74.8036,-83.7616,-64.1985,-64.5581,-67.9425,-74.4446,-76.2985,-67.4046,-67.7641,-71.1485,-77.6506,-70.7894,-79.8056,-73.8168,-74.1763,-77.5606,-84.0626,-77.2016,-80.4076,-86.8197,-73.8168,-74.1763,-77.5606,-84.0626,-77.2016,-80.4076,-86.8197,-86.8197,0,-0.360514,-3.74598,-10.2492,-3.38594,-6.59258,-13.0057,-13.0057,-6.08196,-64.2882,-64.6477,-68.0321,-74.5341,-67.673,-70.879,-77.2912,-77.2912,-3.47578,-76.3881 0|0:49:9,8,3,0,0,0,2,0,9,2:9:354:8,3,0,0,0,2,0,9,2:312,111,0,0,0,81,0,367,78:-27.5772,-4.63767,-31.353,-21.2074,-24.6823,-49.427,-30.2865,-33.7613,-50.3301,-59.4092,-30.2865,-33.7613,-50.3301,-59.4092,-59.4092,-30.2865,-33.7613,-50.3301,-59.4092,-59.4092,-59.4092,-23.6061,-27.0809,-43.65,-52.7291,-52.7291,-52.7291,-52.127,-30.2865,-33.7613,-50.3301,-59.4092,-59.4092,-59.4092,-52.7291,-59.4092,0,-3.47528,-20.0456,-29.1249,-29.1249,-29.1249,-22.4443,-29.1249,-26.4157,-23.8743,-27.3491,-43.918,-52.9971,-52.9971,-52.9971,-46.317,-52.9971,-22.7125,-52.3951 0|0:26:12,4,1,0,0,0,0,0,0,0:12:460:4,1,0,0,0,0,0,0,0:150,39,0,0,0,0,0,0,0:-8.6713,0,-36.5483,-9.07729,-34.5463,-46.5307,-12.2837,-37.7524,-46.8318,-50.0379,-12.2837,-37.7524,-46.8318,-50.0379,-50.0379,-12.2837,-37.7524,-46.8318,-50.0379,-50.0379,-50.0379,-12.2837,-37.7524,-46.8318,-50.0379,-50.0379,-50.0379,-50.0379,-12.2837,-37.7524,-46.8318,-50.0379,-50.0379,-50.0379,-50.0379,-50.0379,-12.2837,-37.7524,-46.8318,-50.0379,-50.0379,-50.0379,-50.0379,-50.0379,-50.0379,-12.2837,-37.7524,-46.8318,-50.0379,-50.0379,-50.0379,-50.0379,-50.0379,-50.0379,-50.0379 0|0:48:9,2,0,1,0,0,0,2,9,4:9:352:2,0,1,0,0,0,2,9,4:78,0,39,0,0,0,79,347,151:-25.7833,-22.0801,-50.4229,-28.4926,-51.025,-57.4373,-25.2863,-47.8189,-54.2311,-53.9301,-28.4926,-51.025,-57.4373,-54.2311,-57.4373,-28.4926,-51.025,-57.4373,-54.2311,-57.4373,-57.4373,-28.4926,-51.025,-57.4373,-54.2311,-57.4373,-57.4373,-57.4373,-21.991,-44.5236,-50.936,-47.7298,-50.936,-50.936,-50.936,-50.3339,0,-22.5336,-28.946,-25.7398,-28.946,-28.946,-28.946,-22.4445,-26.2367,-16.1164,-38.649,-45.0613,-41.8552,-45.0613,-45.0613,-45.0613,-38.56,-16.5699,-43.8572 dDocent_Contig_13384 7 . A T 91.0339 . AB=0.0645161;ABP=54.0749;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=2M1X1M8I1M2X3M1X3M1X4M;DP=152;DPB=164.684;DPRA=1.45312;EPP=7.35324;EPPR=77.6676;GTI=0;LEN=1;MEANALT=6;MQM=60;MQMR=58.1905;NS=6;NUMALT=3;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.952381;PAO=0.25;PQA=7.75;PQR=7.75;PRO=0.25;QA=77;QR=1622;RO=42;RPL=0;RPP=7.35324;RPPR=94.2121;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=40;SRP=77.6676;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:26:2,0,3,0:2:77:0,3,0:0,99,0:-7.39523,-7.99729,-14.32,0,-6.32217,-5.41908,-7.99729,-14.32,-6.32217,-14.32 0|0:31:10,0,0,2:10:387:0,0,2:0,0,77:-3.31217,-6.32247,-36.8356,-6.32247,-36.8356,-36.8356,0,-30.513,-30.513,-29.9109 0|0:19:7,0,0,0:7:272:0,0,0:0,0,0:0,-2.10721,-24.4577,-2.10721,-24.4577,-24.4577,-2.10721,-24.4577,-24.4577,-24.4577 0|1:31:9,2,0,0:9:349:2,0,0:77,0,0:-3.61247,0,-28.071,-6.32174,-28.6731,-34.995,-6.32174,-28.6731,-34.995,-34.995 0|0:19:5,0,0,0:5:185:0,0,0:0,0,0:0,-1.50515,-16.6392,-1.50515,-16.6392,-16.6392,-1.50515,-16.6392,-16.6392,-16.6392 0|0:26:9,0,0,0:9:352:0,0,0:0,0,0:0,-2.70927,-30.0237,-2.70927,-30.0237,-30.0237,-2.70927,-30.0237,-30.0237,-30.0237 dDocent_Contig_13385 7 . A G 610.91 . AB=0.266272;ABP=83.2006;AC=4;AF=0.333333;AN=12;AO=45;CIGAR=1X;DP=187;DPB=187;DPRA=4.69444;EPP=100.727;EPPR=307.016;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1303;QR=5299;RO=140;RPL=0;RPP=100.727;RPPR=307.016;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=140;SRP=307.016;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:336:0:0:0,-2.70927,-30.5909 0/1:16:8,8:8:297:8:214:-14.7055,0,-22.2633 0/0:9:9,0:9:323:0:0:0,-2.70927,-29.4111 0/1:19:15,3:15:575:3:76:-1.52558,0,-46.5453 0/1:75:66,9:66:2506:9:287:-3.5563,0,-203.169 0/1:59:33,25:33:1262:25:726:-48.0255,0,-96.295 dDocent_Contig_13386 30 . C A 110.76 . AB=0.179487;ABP=37.8095;AC=5;AF=0.416667;AN=12;AO=7;CIGAR=1X3M10I6M4D1M;DP=55;DPB=74.4667;DPRA=2.4375;EPP=18.2106;EPPR=76.8404;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0.428571;PAIREDR=0.911765;PAO=85.5;PQA=2376.5;PQR=885.5;PRO=34.5;QA=264;QR=1325;RO=34;RPL=0;RPP=18.2106;RPPR=76.8404;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=34;SRP=76.8404;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:7:6,0:6:232:0:0:0,-1.80618,-20.8957 0|1:15:7,4:7:273:4:149:-10.0932,0,-21.2449 1|1:1:0,0:0:0:0:0:0,0,0 0|1:13:8,1:8:308:1:39:-0.801397,0,-25.0057 0|0:8:6,0:6:234:0:0:0,-1.80618,-21.0427 0|1:11:7,2:7:278:2:76:-4.13273,0,-22.3096 dDocent_Contig_13388 30 . C A 44.0846 . AB=0.2;ABP=14.7363;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X3M3I2M1X;DP=45;DPB=46.2857;DPRA=2.5;EPP=9.52472;EPPR=94.2121;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=8.67362e-19;PAIRED=1;PAIREDR=0.904762;PAO=0;PQA=0;PQR=0;PRO=0;QA=112;QR=1649;RO=42;RPL=0;RPP=9.52472;RPPR=94.2121;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=42;SRP=94.2121;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:3:3,0:3:118:0:0:0,-0.90309,-11.0027 0|0:8:8,0:8:322:0:0:0,-2.40824,-29.3487 0|0:7:7,0:7:267:0:0:0,-2.10721,-24.3879 0|0:8:8,0:8:314:0:0:0,-2.40824,-28.6235 0|0:4:4,0:4:159:0:0:0,-1.20412,-14.692 0|1:15:12,3:12:469:3:112:-5.93118,0,-38.0441 dDocent_Contig_13389 107 . N C 444.26 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=15;CIGAR=1X4M;DP=17;DPB=17;DPRA=0;EPP=35.5824;EPPR=0;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=0;NS=6;NUMALT=2;ODDS=2.1684e-19;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=466;QR=0;RO=0;RPL=0;RPP=35.5824;RPPR=0;RPR=15;RUN=1;SAF=0;SAP=35.5824;SAR=15;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:3:0,0,3:0:0:0,3:0,105:-9.79616,-9.79616,-9.79616,-0.90309,-0.90309,0 1|1:5:0,2,3:0:0:2,3:14,86:-7.8686,-7.29731,-6.69525,-0.90309,-0.175153,0 1|1:1:0,0,1:0:0:0,1:0,31:-3.09945,-3.09945,-3.09945,-0.30103,-0.30103,0 1|1:3:0,0,3:0:0:0,3:0,99:-9.23712,-9.23712,-9.23712,-0.90309,-0.90309,0 1|1:3:0,0,3:0:0:0,3:0,76:-7.09154,-7.09154,-7.09154,-0.90309,-0.90309,0 1|1:2:0,0,2:0:0:0,2:0,69:-6.55266,-6.55266,-6.55266,-0.60206,-0.60206,0 dDocent_Contig_13390 107 . N T 85.3778 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=88;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:42:-3.98978,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,2:0:0:2:46:-4.24585,-0.60206,0 dDocent_Contig_13391 9 . G A 3874.83 . AB=0.498208;ABP=3.01808;AC=2;AF=0.166667;AN=12;AO=140;CIGAR=1X;DP=1414;DPB=1414;DPRA=1.43793;EPP=307.016;EPPR=2457.42;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.5911;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.978571;PAIREDR=0.970958;PAO=0;PQA=0;PQR=0;PRO=0;QA=5309;QR=48303;RO=1274;RPL=0;RPP=307.016;RPPR=2769.47;RPR=140;RUN=1;SAF=140;SAP=307.016;SAR=0;SRF=1237;SRP=2457.42;SRR=37;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:75:75,0:75:2842:0:0:0,-22.5772,-255.595 0/1:178:65,113:65:2433:113:4279:-331.608,0,-165.015 0/1:101:75,26:75:2859:26:991:-59.0973,0,-227.059 0/0:94:94,0:94:3543:0:0:0,-28.2968,-318.623 0/0:411:411,0:411:15640:0:0:0,-123.723,-1406.8 0/0:555:554,1:554:20986:1:39:0,-163.175,-1883.49 dDocent_Contig_13392 6 . C T 189.639 . AB=0.25;ABP=20.3821;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=326;DPB=326;DPRA=1.00926;EPP=26.8965;EPPR=687.024;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=451;QR=12250;RO=315;RPL=0;RPP=26.8965;RPPR=687.024;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=315;SRP=687.024;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:86:86,0:86:3347:0:0:0,-25.8886,-301.357 0/0:94:92,2:92:3575:2:82:0,-20.5171,-314.08 0/0:22:22,0:22:855:0:0:0,-6.62266,-77.272 0/0:92:91,1:91:3540:1:41:0,-23.6002,-314.618 0/1:13:12,1:12:468:1:41:-0.181177,0,-38.5592 0/1:19:12,7:12:465:7:287:-20.4857,0,-36.4812 dDocent_Contig_13393 11 . T C 219.866 . AB=0.232558;ABP=29.7245;AC=1;AF=0.125;AN=8;AO=10;CIGAR=1X;DP=163;DPB=163;DPRA=1.075;EPP=24.725;EPPR=335.246;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=403;QR=5983;RO=153;RPL=0;RPP=24.725;RPPR=335.246;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=153;SRP=335.246;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1151:0:0:0,-9.0309,-103.866 0/1:43:33,10:33:1318:10:403:-23.6856,0,-105.943 0/0:38:38,0:38:1521:0:0:0,-11.4391,-137.132 0/0:52:52,0:52:1993:0:0:0,-15.6536,-179.567 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13394 54 . G C 2031.58 . AB=0.354167;ABP=47.3445;AC=5;AF=0.416667;AN=12;AO=88;CIGAR=1X;DP=280;DPB=280;DPRA=0;EPP=194.1;EPPR=417.762;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.816754;PAO=0;PQA=0;PQR=0;PRO=0;QA=3255;QR=7099;RO=191;RPL=42;RPP=3.40511;RPPR=3.56738;RPR=46;RUN=1;SAF=42;SAP=3.40511;SAR=46;SRF=99;SRP=3.56738;SRR=92;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:48:38,10:38:1394:10:368:-19.015,0,-111.289 0/1:54:20,33:20:720:33:1231:-95.0402,0,-49.0782 0/1:24:13,11:13:485:11:411:-30.1091,0,-36.7626 0/1:43:28,15:28:1041:15:541:-36.0689,0,-81.0424 0/1:71:55,16:55:2063:16:591:-32.1471,0,-164.523 0/0:40:37,3:37:1396:3:113:0,-1.50428,-115.377 dDocent_Contig_13395 8 . C T 1952.37 . AB=0.235142;ABP=238.814;AC=6;AF=0.5;AN=12;AO=91;CIGAR=1X1M;DP=387;DPB=387;DPRA=0;EPP=200.614;EPPR=626.223;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.153846;PAIREDR=0.662021;PAO=0;PQA=0;PQR=0;PRO=0;QA=3488;QR=11040;RO=287;RPL=0;RPP=200.614;RPPR=626.223;RPR=91;RUN=1;SAF=91;SAP=200.614;SAR=0;SRF=287;SRP=626.223;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:49:42,4,3:42:1615:4,3:154,111:-0.010063,0,-131.398,-3.57978,-123.523,-135.265 0|1:93:71,0,21:71:2729:0,21:0,808:-44.9606,-66.3337,-290.372,0,-224.034,-217.712 0|1:80:57,0,22:57:2192:0,22:0,849:-52.829,-69.9877,-249.956,0,-180.23,-173.608 0|1:78:68,0,10:68:2625:0,10:0,382:-11.2535,-31.7236,-247.31,0,-215.969,-212.959 0|1:23:13,0,10:13:503:0,10:0,385:-28.0827,-31.9961,-73.3158,0,-41.7052,-38.6949 0|1:64:36,0,25:36:1376:0,25:0,953:-67.3324,-78.1694,-191.075,0,-112.901,-105.375 dDocent_Contig_13396 8 . C T 2887.1 . AB=0.414141;ABP=15.6882;AC=7;AF=0.583333;AN=12;AO=104;CIGAR=1X;DP=252;DPB=252;DPRA=0;EPP=228.843;EPPR=324.388;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.990385;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3986;QR=5615;RO=148;RPL=0;RPP=228.843;RPPR=324.388;RPR=104;RUN=1;SAF=104;SAP=228.843;SAR=0;SRF=148;SRP=324.388;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:32,2:32:1191:2:76:0,-3.02035,-100.26 0/1:91:49,42:49:1866:42:1600:-116.873,0,-140.79 0/1:72:59,13:59:2246:13:496:-23.3117,0,-180.69 0/1:35:8,27:8:312:27:1044:-83.7316,0,-17.9089 1/1:5:0,5:0:0:5:195:-17.9242,-1.50515,0 1/1:15:0,15:0:0:15:575:-52.0917,-4.51545,0 dDocent_Contig_13397 14 . A G 1173.9 . AB=0.280576;ABP=61.1401;AC=1;AF=0.0833333;AN=12;AO=39;CIGAR=1X3M1X;DP=431;DPB=431;DPRA=2.80808;EPP=87.6977;EPPR=821.655;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1543;QR=14567;RO=377;RPL=0;RPP=87.6977;RPPR=821.655;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=377;SRP=821.655;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:61:61,0,0:61:2361:0,0:0,0:0,-18.3628,-212.672,-18.3628,-212.672,-212.672 0|0:94:79,0,15:79:3075:0,15:0,570:-23.336,-47.1174,-299.832,0,-253.096,-248.581 0|0:11:11,0,0:11:427:0,0:0,0:0,-3.31133,-38.7814,-3.31133,-38.7814,-38.7814 0|0:56:56,0,0:56:2155:0,0:0,0:0,-16.8577,-194.159,-16.8577,-194.159,-194.159 0|0:70:70,0,0:70:2682:0,0:0,0:0,-21.0721,-241.547,-21.0721,-241.547,-241.547 0|1:139:100,39,0:100:3867:39,0:1543,0:-97.2762,0,-306.251,-127.379,-317.992,-444.978 dDocent_Contig_13398 17 . C T 1362.7 . AB=0.075;ABP=65.7659;AC=0;AF=0;AN=12;AO=3;CIGAR=2X;DP=273;DPB=273;DPRA=0.930233;EPP=9.52472;EPPR=456.848;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=0;PAIREDR=0.349282;PAO=0;PQA=0;PQR=0;PRO=0;QA=122;QR=8249;RO=209;RPL=0;RPP=9.52472;RPPR=456.848;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=209;SRP=456.848;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:46:32,0,14:32:1269:0,14:0,565:-37.3451,-46.9781,-151.427,0,-104.85,-100.636 0|0:55:39,0,16:39:1565:0,16:0,637:-41.1084,-52.8486,-181.799,0,-129.349,-124.532 0|0:40:29,3,8:29:1164:3,8:122,321:-17.7142,-16.3794,-111.385,0,-85.84,-93.4955 0|0:46:29,0,17:29:1135:0,17:0,676:-47.3234,-56.0533,-149.357,0,-93.6988,-88.5813 0|0:25:23,0,2:23:886:0,2:0,79:0,-6.92369,-79.6408,-0.0285055,-73.1394,-72.5373 0|0:61:57,0,4:57:2230:0,4:0,164:0,-17.1587,-200.471,-3.21293,-186.934,-185.73 dDocent_Contig_13399 8 . C T 859.366 . AB=0.310924;ABP=39.9618;AC=4;AF=0.333333;AN=12;AO=37;CIGAR=1X;DP=125;DPB=125;DPRA=9.91667;EPP=83.3548;EPPR=194.1;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1417;QR=3376;RO=88;RPL=0;RPP=83.3548;RPPR=194.1;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=88;SRP=194.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:4:4,0:4:154:0:0:0,-1.20412,-14.2335 0/1:15:13,2:13:501:2:78:-2.88802,0,-40.923 0/0:2:2,0:2:77:0:0:0,-0.60206,-7.30914 0/1:11:8,3:8:309:3:117:-7.59905,0,-24.8616 0/1:41:30,11:30:1155:11:424:-26.1714,0,-91.9068 0/1:52:31,21:31:1180:21:798:-56.4905,0,-90.8387 dDocent_Contig_13400 101 . N A 174.394 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=11;CIGAR=4X8I3X;DP=11;DPB=24.2857;DPRA=0;EPP=26.8965;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=17;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=423;QR=0;RO=0;RPL=0;RPP=26.8965;RPPR=0;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:8:0,8:0:0:8:306:-12.3856,-2.40824,0 1|1:3:0,3:0:0:3:117:-4.7525,-0.90309,0 dDocent_Contig_13401 27 . C A 2926.74 . AB=0.164929;ABP=1031.83;AC=3;AF=0.25;AN=12;AO=198;CIGAR=1X;DP=2985;DPB=2985;DPRA=0;EPP=432.962;EPPR=6052.73;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7739;QR=110035;RO=2786;RPL=0;RPP=432.962;RPPR=6052.73;RPR=198;RUN=1;SAF=198;SAP=432.962;SAR=0;SRF=2786;SRP=6052.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:296:237,59:237:9416:59:2315:-119.42,0,-757.773 0/1:416:340,76:340:13451:76:3010:-145.761,0,-1084.42 0/1:343:304,39:304:12036:39:1508:-32.7155,0,-979.163 0/0:601:579,21:579:22831:21:823:0,-106.633,-1978.52 0/0:410:409,1:409:16190:1:41:0,-119.328,-1451.79 0/0:919:917,2:917:36111:2:42:0,-272.658,-3242.83 dDocent_Contig_13402 29 . A T 97.2394 . AB=0.159091;ABP=47.4268;AC=3;AF=0.25;AN=12;AO=7;CIGAR=1X;DP=79;DPB=79;DPRA=1.25714;EPP=18.2106;EPPR=157.185;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=282;QR=2826;RO=71;RPL=0;RPP=18.2106;RPPR=157.185;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=71;SRP=157.185;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:4:4,0:4:157:0:0:0,-1.20412,-14.5079 0/1:11:9,2:9:363:2:80:-4.28046,0,-29.7235 0/1:24:22,2:22:881:2:80:-0.366855,0,-72.3726 0/0:20:20,0:20:800:0:0:0,-6.0206,-72.3165 0/0:11:10,0:10:381:0:0:0,-3.0103,-34.294 0/1:9:6,3:6:244:3:122:-8.66322,0,-19.6296 dDocent_Contig_13403 40 . T C 1912.52 . AB=0;ABP=0;AC=4;AF=0.333333;AN=12;AO=53;CIGAR=1X;DP=319;DPB=319;DPRA=0.398496;EPP=118.098;EPPR=580.622;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2110;QR=10549;RO=266;RPL=0;RPP=118.098;RPPR=580.622;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=266;SRP=580.622;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:116:116,0:116:4574:0:0:0,-34.9195,-411.596 0/0:55:55,0:55:2201:0:0:0,-16.5566,-198.266 0/0:15:15,0:15:587:0:0:0,-4.51545,-53.1669 0/0:80:80,0:80:3187:0:0:0,-24.0824,-286.899 1/1:31:0,31:0:0:31:1245:-112.317,-9.33193,0 1/1:22:0,22:0:0:22:865:-78.1566,-6.62266,0 dDocent_Contig_13405 60 . G T 226.772 . AB=0.409091;ABP=4.58955;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=118;DPB=118;DPRA=0.458333;EPP=22.5536;EPPR=239.701;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.990826;PAO=0;PQA=0;PQR=0;PRO=0;QA=353;QR=4172;RO=109;RPL=9;RPP=22.5536;RPPR=239.701;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=109;SRP=239.701;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:34,0:34:1301:0:0:0,-10.235,-117.374 0/0:27:27,0:27:1021:0:0:0,-8.12781,-92.1981 0/0:9:9,0:9:343:0:0:0,-2.70927,-31.2245 0/0:26:26,0:26:1001:0:0:0,-7.82678,-90.3959 0/1:7:3,4:3:120:4:157:-12.4,0,-9.08069 0/1:15:10,5:10:386:5:196:-13.4991,0,-30.58 dDocent_Contig_13406 23 . T A 2901.16 . AB=0.245318;ABP=303.861;AC=4;AF=0.333333;AN=12;AO=132;CIGAR=2M1X8M;DP=1072;DPB=1095.73;DPRA=0.752889;EPP=289.645;EPPR=1879.16;GTI=0;LEN=1;MEANALT=5.8;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.994213;PAO=0;PQA=0;PQR=0;PRO=0;QA=4960;QR=33428;RO=864;RPL=0;RPP=289.645;RPPR=1879.16;RPR=132;RUN=1;SAF=132;SAP=289.645;SAR=0;SRF=864;SRP=1879.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:101:73,5,20:73:2826:5,20:169,766:-40.8907,-49.1843,-279.811,0,-218.466,-226.132 0|1:187:121,12,46:121:4634:12,46:465,1680:-100.792,-99.0118,-475.686,0,-342.083,-366.436 0|1:83:62,0,15:62:2402:0,15:0,547:-26.0593,-44.7232,-242.072,0,-197.406,-192.891 0|1:163:99,12,50:99:3847:12,50:456,1940:-129.596,-122.01,-434.508,0,-278.743,-301.079 0|0:225:213,0,0:213:8255:0,0:0,0:0,-64.1194,-742.301,-64.1194,-742.301,-742.301 0|0:313:296,0,1:296:11464:0,1:0,27:0,-89.1049,-1030.84,-86.9817,-1028.71,-1028.41 dDocent_Contig_13407 2 . A C 65.3301 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=4I2X;DP=2;DPB=6;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=50;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=69;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:69:-6.53193,-0.60206,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_13409 26 . T A 164.133 . AB=0.210526;ABP=30.668;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=293;DPB=293;DPRA=1.9898;EPP=35.5824;EPPR=604.508;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.981949;PAO=0;PQA=0;PQR=0;PRO=0;QA=604;QR=11129;RO=277;RPL=0;RPP=35.5824;RPPR=604.508;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=277;SRP=604.508;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:37,0:37:1497:0:0:0,-11.1381,-134.97 0/0:52:50,2:50:1989:2:77:0,-8.34536,-171.897 0/0:105:100,5:100:4044:5:204:0,-12.8641,-345.177 0/1:38:29,8:29:1168:8:323:-17.9362,0,-93.8945 0/0:17:17,0:17:690:0:0:0,-5.11751,-62.4285 0/0:44:44,0:44:1741:0:0:0,-13.2453,-156.908 dDocent_Contig_13410 11 . G A 3442.46 . AB=0.0566038;ABP=184.021;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=3M1X9M;DP=343;DPB=311.692;DPRA=0;EPP=24.725;EPPR=200.614;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=396;QR=3528;RO=91;RPL=0;RPP=24.725;RPPR=200.614;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=91;SRP=200.614;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:53:19,8,0,0,0,3,1,0,11,10:19:715:8,0,0,0,3,1,0,11,10:310,0,0,0,116,37,0,447,369:-31.158,-11.4093,-67.5754,-36.8776,-69.9837,-95.4527,-36.8776,-69.9837,-95.4527,-95.4527,-36.8776,-69.9837,-95.4527,-95.4527,-95.4527,-27.3494,-60.4551,-85.9242,-85.9242,-85.9242,-85.0211,-33.8511,-66.957,-92.4259,-92.4259,-92.4259,-82.8975,-92.1249,-36.8776,-69.9837,-95.4527,-95.4527,-95.4527,-85.9242,-92.4259,-95.4527,0,-33.1075,-58.5781,-58.5781,-58.5781,-49.0491,-55.5512,-58.5781,-55.2667,-6.70888,-39.8112,-65.2796,-65.2796,-65.2796,-55.7514,-62.253,-65.2796,-28.4043,-62.2693 0|0:69:14,12,3,2,0,6,0,1,26,3:14:542:12,3,2,0,6,0,1,26,3:450,114,78,0,229,0,41,1028,114:-80.3834,-47.7435,-88.6526,-75.2488,-82.9161,-118.868,-78.1859,-85.8532,-113.359,-122.106,-84.5978,-92.265,-119.771,-122.708,-129.12,-65.8106,-73.478,-100.984,-103.921,-110.333,-108.527,-84.5978,-92.265,-119.771,-122.708,-129.12,-110.333,-129.12,-81.2133,-88.8805,-116.387,-119.324,-125.736,-106.948,-125.736,-125.435,0,-7.66973,-35.1753,-38.1124,-44.5245,-25.7367,-44.5245,-41.1398,-36.6977,-75.2491,-82.9163,-110.422,-113.359,-119.771,-100.984,-119.771,-116.387,-35.1755,-118.868 0|0:105:36,15,1,8,0,19,0,0,2,9:36:1411:15,1,8,0,19,0,0,2,9:575,39,304,0,708,0,0,82,350:-47.1111,-10.7542,-122.278,-54.7422,-123.588,-170.48,-33.0176,-101.864,-145.851,-146.648,-57.9482,-126.794,-170.781,-149.057,-173.987,0,-68.8459,-112.832,-91.1084,-116.038,-110.319,-57.9482,-126.794,-170.781,-149.057,-173.987,-116.038,-173.987,-57.9482,-126.794,-170.781,-149.057,-173.987,-116.038,-173.987,-173.987,-51.1792,-120.025,-164.012,-142.288,-167.218,-109.27,-167.218,-167.218,-166.616,-29.1837,-98.0301,-142.017,-120.293,-145.223,-87.2749,-145.223,-145.223,-138.455,-142.514 0|0:75:22,3,5,3,0,2,0,0,27,2:22:860:3,5,3,0,2,0,0,27,2:117,193,111,0,77,0,0,1090,78:-83.2459,-80.2509,-150.051,-74.0184,-135.104,-143.216,-80.7898,-141.875,-135.642,-150.589,-89.8686,-150.954,-144.721,-151.492,-160.572,-83.5464,-144.632,-138.399,-145.17,-154.249,-153.647,-89.8686,-150.954,-144.721,-151.492,-160.572,-154.249,-160.572,-89.8686,-150.954,-144.721,-151.492,-160.572,-154.249,-160.572,-160.572,0,-61.0919,-54.8591,-61.6309,-70.7101,-64.3875,-70.7101,-70.7101,-62.5822,-83.4568,-144.542,-138.31,-145.081,-154.16,-147.838,-154.16,-154.16,-64.298,-153.558 1|1:4:0,0,0,0,0,0,0,4,0,0:0:0:0,0,0,0,0,0,4,0,0:0,0,0,0,0,0,159,0,0:-14.6908,-14.6908,-14.6908,-14.6908,-14.6908,-14.6908,-14.6908,-14.6908,-14.6908,-14.6908,-14.6908,-14.6908,-14.6908,-14.6908,-14.6908,-14.6908,-14.6908,-14.6908,-14.6908,-14.6908,-14.6908,-14.6908,-14.6908,-14.6908,-14.6908,-14.6908,-14.6908,-14.6908,-1.20412,-1.20412,-1.20412,-1.20412,-1.20412,-1.20412,-1.20412,0,-14.6908,-14.6908,-14.6908,-14.6908,-14.6908,-14.6908,-14.6908,-1.20412,-14.6908,-14.6908,-14.6908,-14.6908,-14.6908,-14.6908,-14.6908,-14.6908,-1.20412,-14.6908,-14.6908 0|0:37:0,1,0,0,16,0,14,5,0,1:0:0:1,0,0,16,0,14,5,0,1:39,0,0,645,0,533,196,0,39:-96.8779,-93.6721,-93.3711,-96.8779,-93.6721,-96.8779,-96.8779,-93.6721,-96.8779,-96.8779,-43.7101,-40.5039,-43.7101,-43.7101,-38.8936,-96.8779,-93.6721,-96.8779,-96.8779,-43.7101,-96.8779,-53.1678,-49.9624,-53.1678,-53.1678,0,-53.1678,-48.9534,-80.7608,-77.555,-80.7608,-80.7608,-27.5905,-80.7608,-37.0527,-79.2557,-96.8779,-93.6721,-96.8779,-96.8779,-43.7101,-96.8779,-53.1678,-80.7608,-96.8779,-93.6721,-90.4663,-93.6721,-93.6721,-40.5039,-93.6721,-49.9624,-77.555,-93.6721,-93.3711 dDocent_Contig_13411 11 . G A 630.391 . AB=0;ABP=0;AC=4;AF=0.333333;AN=12;AO=23;CIGAR=1X;DP=283;DPB=283;DPRA=0.554945;EPP=52.9542;EPPR=567.593;GTI=0;LEN=1;MEANALT=1;MQM=50;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.996154;PAO=0;PQA=0;PQR=0;PRO=0;QA=933;QR=10289;RO=260;RPL=0;RPP=52.9542;RPPR=567.593;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=260;SRP=567.593;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:85:85,0:85:3305:0:0:0,-25.5875,-297.509 0/0:84:78,6:78:3144:6:242:0,-3.35429,-261.092 0/0:38:38,0:38:1486:0:0:0,-11.4391,-133.985 0/0:59:59,0:59:2354:0:0:0,-17.7608,-212.012 1/1:5:0,5:0:0:5:204:-18.5404,-1.50515,0 1/1:12:0,12:0:0:12:487:-43.7204,-3.61236,0 dDocent_Contig_13412 150 . G A 802.734 . AB=0.714286;ABP=8.59409;AC=3;AF=0.25;AN=12;AO=25;CIGAR=1X;DP=80;DPB=80;DPRA=1.2;EPP=57.2971;EPPR=122.441;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.96;PAIREDR=0.927273;PAO=0;PQA=0;PQR=0;PRO=0;QA=989;QR=2181;RO=55;RPL=0;RPP=57.2971;RPPR=122.441;RPR=25;RUN=1;SAF=0;SAP=57.2971;SAR=25;SRF=0;SRP=122.441;SRR=55;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:377:0:0:0,-3.0103,-34.2755 0/0:24:24,0:24:956:0:0:0,-7.22472,-86.3424 0/0:6:6,0:6:242:0:0:0,-1.80618,-22.1569 0/0:10:10,0:10:406:0:0:0,-3.0103,-36.9004 1/1:16:1,15:1:40:15:596:-49.9841,-0.820801,0 0/1:14:4,10:4:160:10:393:-31.5111,0,-10.569 dDocent_Contig_13413 98 . N C 715.086 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=23;CIGAR=2X;DP=23;DPB=23;DPRA=0;EPP=52.9542;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=20.5476;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=791;QR=0;RO=0;RPL=23;RPP=52.9542;RPPR=0;RPR=0;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:23:0,23:0:0:23:791:-71.5086,-6.92369,0 dDocent_Contig_13415 11 . C T 989.588 . AB=0.457143;ABP=4.12706;AC=6;AF=0.6;AN=10;AO=35;CIGAR=1X3M;DP=73;DPB=73;DPRA=0;EPP=79.0118;EPPR=81.1833;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=5;NUMALT=2;ODDS=0;PAIRED=0.971429;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1392;QR=1440;RO=36;RPL=0;RPP=79.0118;RPPR=81.1833;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=36;SRP=81.1833;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:11:6,0,5:6:240:0,5:0,205:-15.5237,-17.3299,-37.0942,0,-20.1693,-18.6641 0|1:17:6,0,11:6:237:0,11:0,419:-32.9324,-34.7386,-54.2452,0,-19.8962,-16.5849 0|1:15:6,2,7:6:242:2,7:81,287:-21.8862,-17.0143,-36.3577,0,-13.2677,-17.84 0|1:27:18,0,9:18:721:0,9:0,359:-24.5448,-29.9633,-89.3634,0,-59.7991,-57.0898 .:.:.:.:.:.:.:. 1|1:3:0,0,3:0:0:0,3:0,122:-11.3725,-11.3725,-11.3725,-0.90309,-0.90309,0 dDocent_Contig_13416 65 . T C 696.789 . AB=0.787879;ABP=26.7649;AC=1;AF=0.0833333;AN=12;AO=61;CIGAR=2X;DP=749;DPB=749;DPRA=1.54762;EPP=135.47;EPPR=1490.47;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.989781;PAO=0;PQA=0;PQR=0;PRO=0;QA=2093;QR=21912;RO=685;RPL=61;RPP=135.47;RPPR=1490.47;RPR=0;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=685;SRP=1490.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:148:148,0:148:4714:0:0:0,-44.5524,-424.465 0|0:267:244,22:244:7799:22:742:0,-13.2905,-634.946 0|0:144:144,0:144:4643:0:0:0,-43.3483,-418.076 0|0:155:140,13:140:4469:13:453:0,-5.16182,-361.341 0|1:33:7,26:7:228:26:898:-71.2016,0,-10.9062 0|0:2:2,0:2:59:0:0:0,-0.60206,-5.60422 dDocent_Contig_13417 33 . T C 804.409 . AB=0.200935;ABP=169.26;AC=6;AF=0.5;AN=12;AO=43;CIGAR=1X;DP=214;DPB=214;DPRA=0;EPP=72.1439;EPPR=374.332;GTI=0;LEN=1;MEANALT=1;MQM=59.0698;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.860465;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1712;QR=6690;RO=171;RPL=6;RPP=51.5402;RPPR=374.332;RPR=37;RUN=1;SAF=40;SAP=72.1439;SAR=3;SRF=171;SRP=374.332;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:25,9:25:995:9:367:-23.16,0,-79.6079 0/1:28:24,4:24:954:4:163:-6.62959,0,-77.7348 0/1:15:7,8:7:279:8:301:-22.7096,0,-20.9657 0/1:15:9,6:9:363:6:245:-17.914,0,-28.5188 0/1:49:44,5:44:1662:5:204:-3.99356,0,-135.055 0/1:73:62,11:62:2437:11:432:-17.2552,0,-197.505 dDocent_Contig_13418 20 . C T 118.209 . AB=0.666667;ABP=4.45795;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=102;DPB=102;DPRA=0.3125;EPP=11.6962;EPPR=215.815;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.867347;PAO=0;PQA=0;PQR=0;PRO=0;QA=164;QR=3899;RO=98;RPL=0;RPP=11.6962;RPPR=215.815;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=98;SRP=215.815;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:679:0:0:0,-5.11751,-61.4376 0/0:18:18,0:18:711:0:0:0,-5.41854,-64.3136 0/0:27:27,0:27:1086:0:0:0,-8.12781,-98.0243 0/0:30:30,0:30:1195:0:0:0,-9.0309,-107.832 0/1:6:2,4:2:82:4:164:-13.3437,0,-5.9735 0/0:4:4,0:4:146:0:0:0,-1.20412,-13.4916 dDocent_Contig_13419 18 . A T 2533.41 . AB=0.361538;ABP=46.3061;AC=6;AF=0.5;AN=12;AO=94;CIGAR=1X;DP=260;DPB=260;DPRA=0;EPP=207.129;EPPR=363.475;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.819149;PAIREDR=0.903614;PAO=0;PQA=0;PQR=0;PRO=0;QA=3787;QR=6638;RO=166;RPL=0;RPP=207.129;RPPR=363.475;RPR=94;RUN=1;SAF=94;SAP=207.129;SAR=0;SRF=166;SRP=363.475;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:23,15:23:923:15:606:-43.4382,0,-71.9348 0/1:44:30,14:30:1211:14:573:-38.666,0,-96.019 0/1:17:3,14:3:123:14:564:-45.9833,0,-6.34728 0/1:53:37,16:37:1485:16:639:-41.8898,0,-117.943 0/1:56:35,21:35:1408:21:843:-59.3193,0,-110.115 0/1:52:38,14:38:1488:14:562:-35.2662,0,-118.505 dDocent_Contig_13420 26 . T A 401.145 . AB=0.186992;ABP=107.682;AC=5;AF=0.416667;AN=12;AO=23;CIGAR=1X;DP=139;DPB=139;DPRA=1.5375;EPP=52.9542;EPPR=254.901;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.869565;PAIREDR=0.931034;PAO=0;PQA=0;PQR=0;PRO=0;QA=935;QR=4688;RO=116;RPL=0;RPP=52.9542;RPPR=254.901;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=116;SRP=254.901;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:14:12,2:12:488:2:82:-3.56526,0,-40.0571 0/1:30:25,5:25:1008:5:204:-9.71313,0,-81.9818 0/0:16:16,0:16:648:0:0:0,-4.81648,-58.6539 0/1:30:25,5:25:1011:5:204:-9.71313,0,-82.2534 0/1:20:18,2:18:721:2:82:-1.75908,0,-59.1946 0/1:29:20,9:20:812:9:363:-24.3033,0,-64.6656 dDocent_Contig_13421 10 . T A 61.9441 . AB=0.0909091;ABP=578.648;AC=2;AF=0.166667;AN=12;AO=36;CIGAR=1X;DP=746;DPB=746;DPRA=2.26286;EPP=81.1833;EPPR=1544.76;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1422;QR=28309;RO=710;RPL=0;RPP=81.1833;RPPR=1544.76;RPR=36;RUN=1;SAF=36;SAP=81.1833;SAR=0;SRF=710;SRP=1544.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:213:194,19:194:7741:19:760:-4.60221,0,-632.184 0/1:183:166,17:166:6578:17:662:-4.81372,0,-536.665 0/0:104:104,0:104:4154:0:0:0,-31.3071,-373.822 0/0:212:212,0:212:8468:0:0:0,-63.8184,-761.636 0/0:30:30,0:30:1204:0:0:0,-9.0309,-108.634 0/0:4:4,0:4:164:0:0:0,-1.20412,-15.1499 dDocent_Contig_13422 83 . C A 499.058 . AB=0.302326;ABP=32.1989;AC=3;AF=0.375;AN=8;AO=28;CIGAR=1X;DP=118;DPB=118;DPRA=0;EPP=63.8115;EPPR=198.443;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=933;QR=2978;RO=90;RPL=28;RPP=63.8115;RPPR=198.443;RPR=0;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=90;SRP=198.443;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:30,2:30:971:2:42:0,-5.64426,-83.6991 0/1:22:17,5:17:569:5:175:-9.47103,0,-44.9055 0/1:19:13,6:13:440:6:205:-13.0654,0,-34.2057 0/1:45:30,15:30:998:15:511:-32.7673,0,-76.5755 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13423 209 . N G 161.608 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=161;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:40:-3.99568,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:80:-7.59157,-0.60206,0 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 dDocent_Contig_13424 14 . C T 96.2862 . AB=0.148148;ABP=61.0771;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=171;DPB=171;DPRA=0.949153;EPP=24.725;EPPR=352.617;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.7;PAIREDR=0.78882;PAO=0;PQA=0;PQR=0;PRO=0;QA=396;QR=6463;RO=161;RPL=0;RPP=24.725;RPPR=352.617;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=161;SRP=352.617;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:21,3:21:851:3:115:-3.49949,0,-69.6762 0/1:30:25,5:25:1016:5:200:-9.34864,0,-82.7005 0/0:17:16,1:16:638:1:40:0,-1.12183,-53.7573 0/0:33:33,0:33:1290:0:0:0,-9.93399,-116.369 0/0:26:26,0:26:1049:0:0:0,-7.82678,-94.6986 0/0:41:40,1:40:1619:1:41:0,-8.24766,-141.84 dDocent_Contig_13425 18 . T A 224.909 . AB=0.105105;ABP=454.057;AC=3;AF=0.25;AN=12;AO=40;CIGAR=1X;DP=668;DPB=668;DPRA=1.20408;EPP=89.8692;EPPR=1364.52;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0.975;PAIREDR=0.979266;PAO=0;PQA=0;PQR=0;PRO=0;QA=1611;QR=25112;RO=627;RPL=0;RPP=89.8692;RPPR=1364.52;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=627;SRP=1364.52;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:86:86,0:86:3422:0:0:0,-25.8886,-308.016 0/1:156:141,15:141:5654:15:604:-7.73354,0,-461.699 0/0:110:109,0:109:4359:0:0:0,-32.8123,-392.064 0/0:139:134,5:134:5333:5:201:0,-23.3727,-461.336 0/1:91:79,12:79:3192:12:481:-16.2473,0,-259.943 0/1:86:78,8:78:3152:8:325:-3.73048,0,-257.849 dDocent_Contig_13426 24 . G T 411.396 . AB=0.301587;ABP=24.5527;AC=2;AF=0.166667;AN=12;AO=19;CIGAR=1X;DP=292;DPB=292;DPRA=0.550218;EPP=44.2683;EPPR=578.578;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.901099;PAO=0;PQA=0;PQR=0;PRO=0;QA=696;QR=10018;RO=273;RPL=0;RPP=44.2683;RPPR=595.822;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=271;SRP=578.578;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:60:60,0:60:2155:0:0:0,-18.0618,-194.167 0/0:56:56,0:56:2057:0:0:0,-16.8577,-185.356 0/0:43:43,0:43:1564:0:0:0,-12.9443,-141.016 0/0:70:70,0:70:2598:0:0:0,-21.0721,-234.004 0/1:32:23,9:23:857:9:332:-20.5917,0,-67.8131 0/1:31:21,10:21:787:10:364:-23.7698,0,-61.8192 dDocent_Contig_13427 9 . C T 154.448 . AB=0.177419;ABP=59.0483;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=162;DPB=162;DPRA=0.883721;EPP=29.068;EPPR=328.731;GTI=0;LEN=1;MEANALT=1;MQM=46.75;MQMR=37.8733;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.54;PAO=0;PQA=0;PQR=0;PRO=0;QA=451;QR=5717;RO=150;RPL=0;RPP=29.068;RPPR=328.731;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=150;SRP=328.731;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:13,1:13:495:1:39:0,-0.378304,-35.2352 0/0:28:28,0:28:1041:0:0:0,-8.42884,-79.6253 0/1:28:25,3:25:964:3:117:-2.31228,0,-78.4556 0/1:34:26,8:26:989:8:295:-16.3202,0,-57.27 0/0:18:18,0:18:690:0:0:0,-5.41854,-31.804 0/0:40:40,0:40:1538:0:0:0,-12.0412,-70.8518 dDocent_Contig_13428 11 . C T 182.496 . AB=0.125;ABP=32.3252;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=3M1X1M2X2M1X1M1D1M1X1M1X1M1D4M;DP=118;DPB=108.864;DPRA=1.3913;EPP=9.52472;EPPR=89.8692;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=115;QR=1532;RO=40;RPL=0;RPP=9.52472;RPPR=89.8692;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=40;SRP=89.8692;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:24:7,0,0,0,3:7:257:0,0,0,3:0,0,0,115:-7.32962,-9.43683,-30.4365,-9.43683,-30.4365,-30.4365,-9.43683,-30.4365,-30.4365,-30.4365,0,-20.9982,-20.9982,-20.9982,-20.0951 0|0:25:8,2,0,3,0:8:309:2,0,3,0:67,0,115,0:-7.03211,-4.02037,-28.7988,-9.44035,-29.4008,-34.8223,0,-19.9622,-25.3832,-24.4801,-9.44035,-29.4008,-34.8223,-25.3832,-34.8223 0|0:28:10,0,0,0,0:10:385:0,0,0,0:0,0,0,0:0,-3.0103,-34.6216,-3.0103,-34.6216,-34.6216,-3.0103,-34.6216,-34.6216,-34.6216,-3.0103,-34.6216,-34.6216,-34.6216,-34.6216 0|0:19:8,0,0,0,0:8:310:0,0,0,0:0,0,0,0:0,-2.40824,-27.877,-2.40824,-27.877,-27.877,-2.40824,-27.877,-27.877,-27.877,-2.40824,-27.877,-27.877,-27.877,-27.877 0|0:7:0,0,2,0,0:0:0:0,2,0,0:0,79,0,0:-7.10899,-7.10899,-7.10899,-0.60206,-0.60206,0,-7.10899,-7.10899,-0.60206,-7.10899,-7.10899,-7.10899,-0.60206,-7.10899,-7.10899 0|0:15:7,0,0,0,0:7:271:0,0,0,0:0,0,0,0:0,-2.10721,-24.3746,-2.10721,-24.3746,-24.3746,-2.10721,-24.3746,-24.3746,-24.3746,-2.10721,-24.3746,-24.3746,-24.3746,-24.3746 dDocent_Contig_13429 12 . C T 149.88 . AB=0.230769;ABP=19.3799;AC=3;AF=0.25;AN=12;AO=6;CIGAR=2M5I5M1X1M1X1M1X3M3X4M;DP=93;DPB=87.8636;DPRA=1.9403;EPP=16.0391;EPPR=83.3548;GTI=0;LEN=1;MEANALT=8;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=223;QR=1433;RO=37;RPL=0;RPP=16.0391;RPPR=83.3548;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=37;SRP=83.3548;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:10:1,0:1:38:0:0:0,-0.30103,-3.41766 0|0:10:5,0:5:193:0:0:0,-1.50515,-17.3625 1|1:1:0,0:0:0:0:0:0,0,0 0|0:18:14,0:14:541:0:0:0,-4.21442,-48.6435 0|1:26:6,6:6:225:6:223:-16.443,0,-16.6206 0|0:28:11,0:11:436:0:0:0,-3.31133,-39.2029 dDocent_Contig_13430 209 . N G 84.8187 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=30.6667;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=116;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:37:-1.19872,-0.30103,0 1/1:2:0,2:0:0:2:79:-6.96702,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13431 107 . N T 270.741 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=9;CIGAR=1X;DP=10;DPB=10;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=277;QR=0;RO=0;RPL=0;RPP=22.5536;RPPR=0;RPR=9;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:29:-2.89966,-0.30103,0 1/1:2:0,2:0:0:2:63:-5.98364,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:4:0,3:0:0:3:95:-8.73304,-0.90309,0 1/1:1:0,1:0:0:1:26:-2.59983,-0.30103,0 1/1:2:0,2:0:0:2:64:-6.07837,-0.60206,0 dDocent_Contig_13432 9 . C T 346.981 . AB=0.0869565;ABP=37.093;AC=0;AF=0;AN=12;AO=2;CIGAR=3M1D1X1M2X1M1X3M1X1M2D1X4M;DP=115;DPB=109.364;DPRA=0;EPP=7.35324;EPPR=141.985;GTI=0;LEN=1;MEANALT=6;MQM=60;MQMR=60;NS=6;NUMALT=7;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=80;QR=2450;RO=64;RPL=0;RPP=7.35324;RPPR=141.985;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=64;SRP=141.985;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:3:1,0,0,0,0,0,0,1:1:36:0,0,0,0,0,0,1:0,0,0,0,0,0,40:-2.99901,-3.30004,-6.22586,-3.30004,-6.22586,-6.22586,-3.30004,-6.22586,-6.22586,-6.22586,-3.30004,-6.22586,-6.22586,-6.22586,-6.22586,-3.30004,-6.22586,-6.22586,-6.22586,-6.22586,-6.22586,-3.30004,-6.22586,-6.22586,-6.22586,-6.22586,-6.22586,-6.22586,0,-2.9225,-2.9225,-2.9225,-2.9225,-2.9225,-2.9225,-2.62147 0|0:18:12,0,0,2,0,2,0,2:12:454:0,0,2,0,2,0,2:0,0,74,0,79,0,80:-2.98359,-6.59595,-43.8039,-6.59595,-43.8039,-43.8039,-0.551022,-37.7514,-37.7514,-37.1493,-6.59595,-43.8039,-43.8039,-37.7514,-43.8039,-0.0916811,-37.3013,-37.3013,-31.2487,-37.3013,-36.6993,-6.59595,-43.8039,-43.8039,-37.7514,-43.8039,-37.3013,-43.8039,0,-37.2115,-37.2115,-31.1588,-37.2115,-30.7083,-37.2115,-36.6094 0|0:14:8,0,0,0,0,0,0,4:8:309:0,0,0,0,0,0,4:0,0,0,0,0,0,160:-10.802,-13.2102,-38.5893,-13.2102,-38.5893,-38.5893,-13.2102,-38.5893,-38.5893,-38.5893,-13.2102,-38.5893,-38.5893,-38.5893,-38.5893,-13.2102,-38.5893,-38.5893,-38.5893,-38.5893,-38.5893,-13.2102,-38.5893,-38.5893,-38.5893,-38.5893,-38.5893,-38.5893,0,-25.4033,-25.4033,-25.4033,-25.4033,-25.4033,-25.4033,-24.1992 0|0:23:12,2,0,0,2,1,0,4:12:451:2,0,0,2,1,0,4:79,0,0,80,33,0,157:-9.3042,-6.41349,-42.7519,-12.9166,-43.354,-49.8563,-12.9166,-43.354,-49.8563,-49.8563,-6.32319,-36.7616,-43.2643,-43.2643,-42.6622,-10.2539,-40.6882,-47.1904,-47.1904,-40.5985,-46.8894,-12.9166,-43.354,-49.8563,-49.8563,-43.2643,-47.1904,-49.8563,0,-30.4383,-36.9412,-36.9412,-30.3485,-34.2757,-36.9412,-35.7371 0|0:13:9,0,0,0,0,0,0,2:9:345:0,0,0,0,0,0,2:0,0,0,0,0,0,80:-3.91325,-6.62252,-34.9481,-6.62252,-34.9481,-34.9481,-6.62252,-34.9481,-34.9481,-34.9481,-6.62252,-34.9481,-34.9481,-34.9481,-34.9481,-6.62252,-34.9481,-34.9481,-34.9481,-34.9481,-34.9481,-6.62252,-34.9481,-34.9481,-34.9481,-34.9481,-34.9481,-34.9481,0,-28.354,-28.354,-28.354,-28.354,-28.354,-28.354,-27.7519 0|0:44:22,0,3,0,0,2,3,7:22:855:0,3,0,0,2,3,7:0,120,0,0,80,117,273:-15.818,-22.4407,-92.6995,-12.5536,-82.8135,-81.9104,-22.4407,-92.6995,-82.8135,-92.6995,-22.4407,-92.6995,-82.8135,-92.6995,-92.6995,-15.8493,-86.1088,-76.2227,-86.1088,-86.1088,-85.5068,-12.8229,-83.082,-73.1958,-83.082,-83.082,-76.4912,-82.1789,0,-70.2594,-60.3731,-70.2594,-70.2594,-63.6686,-60.6418,-68.1522 dDocent_Contig_13435 8 . C T 323.626 . AB=0.232877;ABP=48.2543;AC=3;AF=0.25;AN=12;AO=17;CIGAR=1X1M;DP=131;DPB=131;DPRA=1.25862;EPP=39.9253;EPPR=246.215;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.508929;PAO=0;PQA=0;PQR=0;PRO=0;QA=647;QR=4305;RO=112;RPL=0;RPP=39.9253;RPPR=246.215;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=112;SRP=246.215;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:19:19,0,0:19:725:0,0:0,0:0,-5.71957,-65.579,-5.71957,-65.579,-65.579 0|1:44:35,0,9:35:1343:0,9:0,342:-17.8903,-28.4263,-138.667,0,-110.621,-107.912 0|0:21:21,0,0:21:808:0,0:0,0:0,-6.32163,-73.0457,-6.32163,-73.0457,-73.0457 0|0:18:18,0,0:18:695:0,0:0,0:0,-5.41854,-62.8839,-5.41854,-62.8839,-62.8839 0|1:11:7,0,4:7:273:0,4:0,154:-10.9223,-13.0295,-35.4738,0,-22.8308,-21.6267 0|1:18:12,2,4:12:461:2,4:73,151:-8.77193,-6.42419,-43.6713,0,-31.899,-36.6564 dDocent_Contig_13436 10 . C A 2000.9 . AB=0.0325203;ABP=1170.4;AC=0;AF=0;AN=12;AO=20;CIGAR=3M1X5M10I5M;DP=1375;DPB=1949.79;DPRA=0;EPP=46.4397;EPPR=1073.55;GTI=0;LEN=1;MEANALT=26;MQM=46;MQMR=60;NS=6;NUMALT=9;ODDS=2.22045e-16;PAIRED=0;PAIREDR=0.555781;PAO=0;PQA=0;PQR=0;PRO=0;QA=721;QR=19404;RO=493;RPL=0;RPP=46.4397;RPPR=1073.55;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=493;SRP=1073.55;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:208:86,6,0,11,23,19,0,12,9,13:86:3390:6,0,11,23,19,0,12,9,13:151,0,55,345,513,0,190,304,460:-11.3274,-26.8363,-304.018,-37.216,-305.824,-316.201,-37.8352,-306.44,-316.817,-313.506,-19.1974,-287.807,-298.183,-298.802,-291.259,-0.630265,-269.25,-279.627,-280.244,-261.611,-273.907,-37.216,-305.824,-316.201,-316.817,-298.183,-279.627,-316.201,-26.9187,-295.528,-305.905,-306.522,-287.89,-269.332,-305.905,-302.293,-14.4123,-283.028,-293.405,-294.021,-275.387,-256.83,-293.405,-283.109,-290.695,0,-268.621,-278.998,-279.614,-260.981,-242.423,-278.998,-268.702,-256.201,-275.085 0|0:268:99,2,6,20,22,37,7,19,1,13:99:3890:2,6,20,22,37,7,19,1,13:45,225,132,330,1032,260,281,34,322:-44.2165,-71.1092,-390.527,-55.5828,-372.697,-373.8,-72.3872,-389.494,-373.971,-386.382,-56.7792,-373.89,-358.367,-375.166,-370.176,0,-317.126,-301.602,-318.403,-302.798,-308.896,-53.1747,-370.289,-354.766,-371.563,-355.959,-299.194,-371.091,-59.4336,-376.544,-361.021,-377.82,-362.216,-305.452,-358.614,-373.734,-71.3898,-388.501,-372.978,-389.775,-374.171,-317.406,-370.57,-376.825,-391.109,-50.9324,-368.047,-352.524,-369.322,-353.717,-296.953,-350.116,-356.372,-368.328,-367.042 0|0:203:82,0,0,24,21,36,0,4,0,14:82:3228:0,0,24,21,36,0,4,0,14:0,0,154,339,860,0,56,0,513:-33.9314,-58.6159,-324.242,-58.6159,-324.242,-324.242,-56.8619,-322.481,-322.481,-315.256,-40.0185,-305.648,-305.648,-303.893,-299.326,0,-265.647,-265.647,-263.896,-247.058,-254.81,-58.6159,-324.242,-324.242,-322.481,-305.648,-265.647,-324.242,-55.7853,-321.412,-321.412,-319.652,-302.818,-262.818,-321.412,-320.208,-58.6159,-324.242,-324.242,-322.481,-305.648,-265.647,-324.242,-321.412,-324.242,-17.8871,-283.528,-283.528,-281.769,-264.934,-224.933,-283.528,-280.698,-283.528,-279.314 0|0:347:111,2,12,34,32,44,13,31,1,15:111:4377:2,12,34,32,44,13,31,1,15:73,431,170,480,1136,461,511,26,536:-46.0506,-73.5995,-433.182,-44.5511,-398.875,-401.127,-81.3554,-435.67,-406.626,-431.3,-54.3826,-408.703,-379.659,-416.458,-404.934,0,-354.329,-325.285,-362.085,-335.116,-346.949,-42.5791,-396.903,-367.859,-404.654,-377.687,-323.313,-398.855,-50.2899,-404.611,-375.567,-412.366,-385.397,-331.024,-373.595,-401.144,-77.4496,-431.769,-402.725,-439.52,-412.552,-358.179,-400.753,-408.461,-437.333,-38.0003,-392.325,-363.28,-400.076,-373.109,-318.735,-361.309,-369.017,-396.175,-393.674 0|0:171:72,0,17,27,8,4,0,14,0,8:72:2830:0,17,27,8,4,0,14,0,8:0,633,135,120,96,0,196,0,316:-29.9985,-51.6727,-284.526,0,-232.878,-227.761,-53.2158,-286.051,-234.407,-277.923,-45.4059,-278.26,-226.612,-279.789,-275.852,-45.1497,-278.005,-226.357,-279.531,-271.739,-276.801,-51.6727,-284.526,-232.878,-286.051,-278.26,-278.005,-284.526,-41.9209,-274.774,-223.127,-276.307,-268.51,-268.254,-274.774,-270.56,-51.6727,-284.526,-232.878,-286.051,-278.26,-278.005,-284.526,-274.774,-284.526,-26.0815,-258.946,-207.297,-260.472,-252.68,-252.425,-258.946,-249.194,-258.946,-256.538 0|0:178:43,0,19,59,1,6,0,8,0,6:43:1689:0,19,59,1,6,0,8,0,6:0,719,363,13,166,0,96,0,214:-45.7707,-58.715,-197.682,0,-138.981,-133.262,-55.8463,-194.797,-136.105,-177.036,-58.1076,-197.075,-138.374,-194.191,-196.774,-47.1966,-186.166,-127.465,-183.286,-185.559,-184.36,-58.715,-197.682,-138.981,-194.797,-197.075,-186.166,-197.682,-54.4983,-193.466,-134.765,-190.591,-192.859,-181.95,-193.466,-191.058,-58.715,-197.682,-138.981,-194.797,-197.075,-186.166,-197.682,-193.466,-197.682,-41.5355,-180.506,-121.804,-177.624,-179.899,-168.99,-180.506,-176.29,-180.506,-178.7 dDocent_Contig_13439 14 . T G 69.068 . AB=0.133333;ABP=55.5599;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=219;DPB=219;DPRA=1.2931;EPP=16.0391;EPPR=465.534;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.976526;PAO=0;PQA=0;PQR=0;PRO=0;QA=240;QR=7474;RO=213;RPL=0;RPP=16.0391;RPPR=465.534;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=213;SRP=465.534;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1112:0:0:0,-9.93399,-100.369 0/0:36:36,0:36:1281:0:0:0,-10.8371,-115.584 0/0:14:14,0:14:450:0:0:0,-4.21442,-40.8035 0/0:46:46,0:46:1623:0:0:0,-13.8474,-146.346 0/1:45:39,6:39:1391:6:240:-8.42968,0,-111.929 0/0:45:45,0:45:1617:0:0:0,-13.5463,-145.808 dDocent_Contig_13440 9 . C G 121.859 . AB=0.146667;ABP=84.3392;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=251;DPB=251;DPRA=2.11458;EPP=39.9253;EPPR=511.135;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=643;QR=8966;RO=234;RPL=0;RPP=39.9253;RPPR=511.135;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=234;SRP=511.135;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:23,5:23:891:5:193:-9.31265,0,-72.0801 0/0:69:67,2:67:2560:2:78:0,-13.3676,-223.195 0/1:47:41,6:41:1569:6:221:-6.09509,0,-127.328 0/0:59:55,4:55:2105:4:151:0,-3.80342,-175.72 0/0:32:32,0:32:1240:0:0:0,-9.63296,-111.893 0/0:16:16,0:16:601:0:0:0,-4.81648,-54.4237 dDocent_Contig_13441 65 . A C 1724.98 . AB=0.524752;ABP=3.54779;AC=6;AF=0.5;AN=12;AO=69;CIGAR=1X;DP=126;DPB=126;DPRA=2.6;EPP=152.842;EPPR=126.784;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.77193;PAO=0;PQA=0;PQR=0;PRO=0;QA=2317;QR=1937;RO=57;RPL=63;RPP=105.258;RPPR=126.784;RPR=6;RUN=1;SAF=63;SAP=105.258;SAR=6;SRF=57;SRP=126.784;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:311:0:0:0,-2.70927,-28.3252 0/1:16:8,8:8:259:8:246:-17.6235,0,-18.8096 0/1:36:24,12:24:824:12:413:-26.6638,0,-63.6402 0/1:28:10,18:10:337:18:619:-47.6052,0,-22.2277 1/1:16:0,16:0:0:16:538:-48.7399,-4.81648,0 0/1:21:6,15:6:206:15:501:-39.0869,0,-12.5551 dDocent_Contig_13443 35 . G A 1238.74 . AB=0.346405;ABP=34.3618;AC=2;AF=0.166667;AN=12;AO=53;CIGAR=1X;DP=486;DPB=486;DPRA=0.918919;EPP=12.2288;EPPR=212.195;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.679245;PAIREDR=0.462963;PAO=0;PQA=0;PQR=0;PRO=0;QA=1917;QR=15409;RO=432;RPL=0;RPP=118.098;RPPR=941.086;RPR=53;RUN=1;SAF=19;SAP=12.2288;SAR=34;SRF=114;SRP=212.195;SRR=318;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:72:72,0:72:2537:0:0:0,-21.6742,-228.565 0/0:104:103,0:103:3663:0:0:0,-31.0061,-329.739 0/0:72:72,0:72:2564:0:0:0,-21.6742,-230.978 0/0:85:85,0:85:3046:0:0:0,-25.5875,-274.332 0/1:81:40,41:40:1436:41:1470:-108.197,0,-105.137 0/1:72:60,12:60:2163:12:447:-18.8987,0,-173.221 dDocent_Contig_13444 24 . C T 469.912 . AB=0.359375;ABP=14.0034;AC=5;AF=0.5;AN=10;AO=23;CIGAR=1X;DP=64;DPB=64;DPRA=0;EPP=52.9542;EPPR=92.0407;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=820;QR=1656;RO=41;RPL=0;RPP=52.9542;RPPR=92.0407;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=41;SRP=92.0407;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:6,6:6:240:6:185:-13.3362,0,-18.3628 0/1:14:10,4:10:398:4:147:-9.37488,0,-31.9623 0/1:14:9,5:9:366:5:181:-12.4272,0,-29.0905 0/1:21:15,6:15:612:6:231:-14.8354,0,-49.0953 0/1:3:1,2:1:40:2:76:-6.31158,0,-3.09259 ./.:.:.:.:.:.:.:. dDocent_Contig_13445 164 . A C 89.7385 . AB=0.134146;ABP=98.3432;AC=3;AF=0.25;AN=12;AO=12;CIGAR=1X;DP=110;DPB=110;DPRA=10.5;EPP=29.068;EPPR=182.489;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.2653;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0.795918;PAO=0;PQA=0;PQR=0;PRO=0;QA=454;QR=3733;RO=98;RPL=12;RPP=29.068;RPPR=182.489;RPR=0;RUN=1;SAF=0;SAP=29.068;SAR=12;SRF=0;SRP=215.815;SRR=98;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:26,5:26:1006:5:199:-8.95613,0,-81.4983 0/1:31:28,3:28:1041:3:116:-1.48547,0,-83.6524 0/0:23:22,1:22:855:1:40:0,-2.92801,-72.7077 0/1:20:17,3:17:654:3:99:-3.21339,0,-53.1686 0/0:4:4,0:4:136:0:0:0,-1.20412,-12.5733 0/0:1:1,0:1:41:0:0:0,-0.30103,-4.09457 dDocent_Contig_13446 9 . C A 4307.44 . AB=0.263158;ABP=12.2676;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=2M7I1X3M5I1M1X3M1X;DP=259;DPB=414;DPRA=4.75;EPP=13.8677;EPPR=228.843;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=196;QR=4043;RO=104;RPL=0;RPP=13.8677;RPPR=228.843;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=104;SRP=228.843;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:19:0,13,5:0:0:13,5:490,196:-56.2745,-16.1285,-12.2151,-40.152,0,-38.6469 0|0:15:7,8,0:7:278:8,0:301,0:-22.9317,0,-20.8757,-25.0389,-23.2839,-47.9358 0|0:4:0,4,0:0:0:4,0:149,0:-13.7723,-1.20412,0,-13.7723,-1.20412,-13.7723 0|0:14:12,2,0:12:465:2,0:78,0:-3.18905,0,-37.9849,-6.80141,-38.587,-44.9991 0|0:115:34,80,0:34:1322:80,0:2992,0:-234.775,0,-84.5698,-245.01,-108.652,-353.649 0|0:92:51,41,0:51:1978:41,0:1516,0:-109.018,0,-150.549,-124.371,-162.891,-286.884 dDocent_Contig_13447 24 . C A 161.604 . AB=0.28;ABP=13.5202;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=144;DPB=144;DPRA=1.05042;EPP=18.2106;EPPR=300.502;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.788321;PAO=0;PQA=0;PQR=0;PRO=0;QA=276;QR=5449;RO=137;RPL=0;RPP=18.2106;RPPR=300.502;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=137;SRP=300.502;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:483:0:0:0,-3.61236,-43.8216 0/1:25:18,7:18:715:7:276:-17.6833,0,-57.1489 0/0:29:29,0:29:1165:0:0:0,-8.72987,-105.129 0/0:37:37,0:37:1434:0:0:0,-11.1381,-129.301 0/0:21:21,0:21:843:0:0:0,-6.32163,-76.1825 0/0:20:20,0:20:809:0:0:0,-6.0206,-73.1248 dDocent_Contig_13450 83 . A C 304.858 . AB=0.342105;ABP=11.239;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=226;DPB=226;DPRA=1.01064;EPP=4.51363;EPPR=10.4422;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.769231;PAIREDR=0.615023;PAO=0;PQA=0;PQR=0;PRO=0;QA=479;QR=7855;RO=213;RPL=13;RPP=31.2394;RPPR=465.534;RPR=0;RUN=1;SAF=8;SAP=4.51363;SAR=5;SRF=120;SRP=10.4422;SRR=93;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:47:47,0:47:1753:0:0:0,-14.1484,-158.013 0/0:42:42,0:42:1599:0:0:0,-12.6433,-144.167 0/0:25:25,0:25:932:0:0:0,-7.52575,-84.1886 0/0:33:33,0:33:1169:0:0:0,-9.93399,-105.499 0/0:41:41,0:41:1510:0:0:0,-12.3422,-136.17 0/1:38:25,13:25:892:13:479:-32.0087,0,-69.1535 dDocent_Contig_13451 48 . T C 913.08 . AB=0.149457;ABP=395.787;AC=5;AF=0.416667;AN=12;AO=55;CIGAR=7M1X11M;DP=443;DPB=444;DPRA=0.981333;EPP=122.441;EPPR=760.854;GTI=0;LEN=1;MEANALT=3.4;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.997135;PAO=0;PQA=0;PQR=0;PRO=0;QA=2235;QR=13762;RO=349;RPL=55;RPP=122.441;RPPR=760.854;RPR=0;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=349;SRP=760.854;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:61:48,2,9:48:1904:2,9:76,368:-15.9312,-24.1524,-180.274,0,-150.506,-154.029 0|1:60:33,6,18:33:1298:6,18:233,726:-49.9132,-40.7076,-145.662,0,-87.6234,-101.347 0|1:24:19,1,4:19:752:1,4:41,164:-7.81675,-10.1522,-71.7315,0,-58.4938,-60.6744 0|1:163:129,13,19:129:5056:13,19:506,772:-24.8553,-22.1131,-433.953,0,-374.19,-410.049 0|1:60:52,1,5:52:2061:1,5:40,205:-1.27096,-13.6305,-182.964,0,-166.343,-168.133 0|0:75:68,2,0:68:2691:2,0:71,0:0,-14.6774,-235.619,-20.47,-236.221,-242.003 dDocent_Contig_13452 22 . G A 533.174 . AB=0.175439;ABP=159.471;AC=2;AF=0.2;AN=10;AO=34;CIGAR=1X3M1X;DP=329;DPB=329;DPRA=2.32031;EPP=76.8404;EPPR=639.252;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1351;QR=11379;RO=293;RPL=0;RPP=76.8404;RPPR=639.252;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=293;SRP=639.252;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:43:41,1:41:1581:1:40:0,-9.04715,-138.548 0|1:79:70,9:70:2731:9:361:-9.0733,0,-222.142 0|1:92:70,21:70:2755:21:832:-47.5451,0,-220.449 0|0:83:80,3:80:3088:3:118:0,-13.9828,-267.046 .:.:.:.:.:.:.:. 0|0:32:32,0:32:1224:0:0:0,-9.63296,-110.441 dDocent_Contig_13454 13 . C G 1792.84 . AB=0.205882;ABP=28.557;AC=5;AF=0.416667;AN=12;AO=56;CIGAR=1X;DP=230;DPB=230;DPRA=0.586207;EPP=124.613;EPPR=380.846;GTI=0;LEN=1;MEANALT=1;MQM=57.375;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2218;QR=6846;RO=174;RPL=0;RPP=124.613;RPPR=380.846;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=174;SRP=380.846;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:44,0:44:1726:0:0:0,-13.2453,-155.568 0/0:36:36,0:36:1418:0:0:0,-10.8371,-127.872 0/1:34:27,7:27:1083:7:280:-13.0794,0,-87.523 0/0:65:65,0:65:2539:0:0:0,-19.5669,-228.664 1/1:22:0,22:0:0:22:878:-79.3285,-6.62266,0 1/1:29:2,27:2:80:27:1060:-88.0981,-1.1383,0 dDocent_Contig_13455 40 . A T 4164.89 . AB=0.467949;ABP=5.79424;AC=6;AF=0.5;AN=12;AO=146;CIGAR=1X;DP=312;DPB=312;DPRA=0;EPP=320.045;EPPR=363.475;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.527397;PAIREDR=0.692771;PAO=0;PQA=0;PQR=0;PRO=0;QA=5776;QR=6578;RO=166;RPL=0;RPP=320.045;RPPR=363.475;RPR=146;RUN=1;SAF=146;SAP=320.045;SAR=0;SRF=166;SRP=363.475;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:9,11:9:362:11:445:-34.3851,0,-26.9242 0/1:50:24,26:24:950:26:1054:-80.0975,0,-70.7498 0/1:35:12,23:12:483:23:893:-70.1341,0,-33.2844 0/1:65:35,30:35:1388:30:1164:-85.4766,0,-105.612 0/1:30:8,22:8:324:22:883:-70.7458,0,-20.4983 0/1:112:78,34:78:3071:34:1337:-86.8719,0,-242.762 dDocent_Contig_13456 43 . C T 1062.15 . AB=0.298507;ABP=50.2641;AC=6;AF=0.5;AN=12;AO=43;CIGAR=1X;DP=139;DPB=139;DPRA=13.7;EPP=96.3836;EPPR=211.472;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1689;QR=3815;RO=96;RPL=0;RPP=96.3836;RPPR=211.472;RPR=43;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=96;SRP=211.472;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:17,9:17:687:9:348:-23.8469,0,-54.3328 0/1:39:31,8:31:1225:8:312:-16.7001,0,-98.7782 0/1:31:24,7:24:946:7:287:-16.8733,0,-76.1097 0/1:38:22,16:22:877:16:636:-46.1336,0,-67.7945 0/0:2:2,0:2:80:0:0:0,-0.60206,-7.59157 1/1:3:0,3:0:0:3:106:-9.88309,-0.90309,0 dDocent_Contig_13457 7 . A C 38.0014 . AB=0.114754;ABP=81.6461;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=192;DPB=192;DPRA=0.90099;EPP=22.5536;EPPR=391.751;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=58.765;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.803279;PAO=0;PQA=0;PQR=0;PRO=0;QA=351;QR=7023;RO=183;RPL=0;RPP=22.5536;RPPR=400.39;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=182;SRP=391.751;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:28,2:28:1056:2:78:0,-1.62743,-86.4829 0/0:32:32,0:32:1229:0:0:0,-9.63296,-110.051 0/1:41:37,4:37:1431:4:156:-2.07506,0,-116.727 0/0:56:56,0:56:2162:0:0:0,-16.8577,-194.383 0/0:13:13,0:13:492:0:0:0,-3.91339,-44.6247 0/1:20:17,3:17:653:3:117:-4.88978,0,-52.9815 dDocent_Contig_13458 101 . A G 248.523 . AB=0.232143;ABP=37.909;AC=3;AF=0.25;AN=12;AO=13;CIGAR=1X;DP=120;DPB=120;DPRA=0.875;EPP=31.2394;EPPR=235.358;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.700935;PAO=0;PQA=0;PQR=0;PRO=0;QA=509;QR=4147;RO=107;RPL=13;RPP=31.2394;RPPR=235.358;RPR=0;RUN=1;SAF=0;SAP=31.2394;SAR=13;SRF=0;SRP=235.358;SRR=107;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:16,3:16:628:3:111:-4.63366,0,-51.1384 0/0:37:37,0:37:1422:0:0:0,-11.1381,-128.243 0/1:17:13,4:13:480:4:163:-9.94092,0,-38.4147 0/1:20:14,6:14:551:6:235:-15.4994,0,-43.9127 0/0:8:8,0:8:309:0:0:0,-2.40824,-28.1708 0/0:19:19,0:19:757:0:0:0,-5.71957,-68.4558 dDocent_Contig_13459 20 . G A 281.94 . AB=0.34375;ABP=9.79615;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=185;DPB=185;DPRA=1.04575;EPP=26.8965;EPPR=380.846;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=58.8161;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.471264;PAO=0;PQA=0;PQR=0;PRO=0;QA=430;QR=6935;RO=174;RPL=0;RPP=26.8965;RPPR=380.846;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=174;SRP=380.846;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:21,11:21:843:11:430:-29.4158,0,-66.5025 0/0:34:34,0:34:1348:0:0:0,-10.235,-120.451 0/0:33:33,0:33:1322:0:0:0,-9.93399,-119.13 0/0:21:21,0:21:836:0:0:0,-6.32163,-75.4983 0/0:25:25,0:25:1001:0:0:0,-7.52575,-90.3659 0/0:40:40,0:40:1585:0:0:0,-12.0412,-142.825 dDocent_Contig_13460 34 . C T 155.8 . AB=0.123967;ABP=151.622;AC=1;AF=0.0833333;AN=12;AO=18;CIGAR=1X;DP=873;DPB=873;DPRA=1.70701;EPP=42.0968;EPPR=1859.62;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995322;PAO=0;PQA=0;PQR=0;PRO=0;QA=712;QR=33506;RO=855;RPL=0;RPP=42.0968;RPPR=1859.62;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=855;SRP=1859.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:82:82,0:82:3193:0:0:0,-24.6845,-287.454 0/0:86:86,0:86:3390:0:0:0,-25.8886,-305.149 0/0:66:66,0:66:2573:0:0:0,-19.868,-231.718 0/1:121:106,15:106:4159:15:591:-17.1028,0,-337.867 0/0:237:237,0:237:9317:0:0:0,-71.3441,-838.026 0/0:281:278,3:278:10874:3:121:0,-73.3092,-966.725 dDocent_Contig_13461 21 . A G 810.612 . AB=0.267717;ABP=62.5292;AC=2;AF=0.166667;AN=12;AO=35;CIGAR=1X;DP=286;DPB=286;DPRA=1.30645;EPP=79.0118;EPPR=548.05;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0285714;PAIREDR=0.788845;PAO=0;PQA=0;PQR=0;PRO=0;QA=1373;QR=10033;RO=251;RPL=0;RPP=79.0118;RPPR=548.05;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=251;SRP=548.05;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:26,11:26:1036:11:434:-28.2722,0,-82.3988 0/0:83:83,0:83:3294:0:0:0,-24.9855,-296.526 0/1:90:67,23:67:2680:23:920:-56.0108,0,-214.219 0/0:35:34,1:34:1364:1:19:0,-8.63608,-121.121 0/0:20:20,0:20:812:0:0:0,-6.0206,-73.394 0/0:21:21,0:21:847:0:0:0,-6.32163,-76.5418 dDocent_Contig_13462 14 . A G 79.0309 . AB=0.171429;ABP=35.8306;AC=2;AF=0.25;AN=8;AO=6;CIGAR=1X;DP=106;DPB=106;DPRA=0.492958;EPP=16.0391;EPPR=220.158;GTI=0;LEN=1;MEANALT=1;MQM=54.1667;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=235;QR=3951;RO=100;RPL=0;RPP=16.0391;RPPR=220.158;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=100;SRP=220.158;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:27:23,4:23:922:4:156:-6.23201,0,-75.1555 0/0:30:30,0:30:1158:0:0:0,-9.0309,-104.503 0/0:41:41,0:41:1635:0:0:0,-12.3422,-147.38 0/1:8:6,2:6:236:2:79:-5.06892,0,-19.2006 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13464 98 . N A 61.7412 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=65;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:65:-6.17303,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13466 41 . A T 720.982 . AB=0.0613208;ABP=357.37;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=11M2X6M;DP=306;DPB=315.737;DPRA=0;EPP=31.2394;EPPR=474.22;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.986175;PAO=0;PQA=0;PQR=0;PRO=0;QA=494;QR=8444;RO=217;RPL=0;RPP=31.2394;RPPR=474.22;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=217;SRP=474.22;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:40:29,0,0,2,9:29:1139:0,0,2,9:0,0,79,334:-18.5734,-27.3033,-120.997,-27.3033,-120.997,-120.997,-20.798,-114.495,-114.495,-113.893,0,-93.6788,-93.6788,-87.1777,-90.9695 0|1:54:44,4,0,5,1:44:1687:4,0,5,1:160,0,176,33:-1.05496,-1.0999,-138.375,-14.3003,-139.579,-152.76,0,-125.264,-138.446,-136.94,-11.6364,-136.912,-150.093,-135.779,-149.792 0|0:36:27,0,0,0,4:27:1060:0,0,0,4:0,0,0,152:-4.41305,-12.5409,-99.8026,-12.5409,-99.8026,-99.8026,-12.5409,-99.8026,-99.8026,-99.8026,0,-87.3372,-87.3372,-87.3372,-86.1331 0|1:49:41,3,0,5,0:41:1591:3,0,5,0:118,0,200,0:-4.1369,-6.77493,-136.573,-16.4791,-137.476,-147.183,0,-120.999,-130.706,-129.201,-16.4791,-137.476,-147.183,-130.706,-147.183 0|0:58:36,0,8,0,13:36:1400:0,8,0,13:0,285,0,504:-30.5875,-41.4246,-156.484,-18.2079,-133.263,-130.855,-41.4246,-156.484,-133.263,-156.484,0,-115.082,-91.862,-115.082,-111.168 0|0:69:40,0,13,1,11:40:1567:0,13,1,11:0,413,39,433:-23.5994,-35.6406,-164.515,-2.43557,-131.293,-127.379,-32.4334,-161.309,-128.087,-161.008,0,-128.894,-95.6746,-125.688,-125.583 dDocent_Contig_13467 10 . A T 86.5721 . AB=0.75;ABP=5.18177;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=206;DPB=206;DPRA=2.32258;EPP=18.2106;EPPR=435.133;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.979899;PAO=0;PQA=0;PQR=0;PRO=0;QA=286;QR=8013;RO=199;RPL=0;RPP=18.2106;RPPR=435.133;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=199;SRP=435.133;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1407:0:0:0,-10.536,-126.883 0/0:39:37,2:37:1490:2:82:0,-3.96049,-126.559 0/0:25:25,0:25:1002:0:0:0,-7.52575,-90.4742 0/0:101:99,2:99:3992:2:82:0,-22.6244,-351.476 0/0:2:2,0:2:82:0:0:0,-0.60206,-7.77968 0/1:4:1,3:1:40:3:122:-10.1684,0,-2.79156 dDocent_Contig_13468 11 . A G 2913.07 . AB=0.51049;ABP=3.14697;AC=8;AF=0.666667;AN=12;AO=93;CIGAR=2M1X8M;DP=166;DPB=167.909;DPRA=0;EPP=204.957;EPPR=120.27;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3745;QR=2101;RO=54;RPL=0;RPP=204.957;RPPR=120.27;RPR=93;RUN=1;SAF=93;SAP=204.957;SAR=0;SRF=54;SRP=120.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:26:7,1,0,18:7:265:1,0,18:39,0,724:-57.5682,-56.4702,-77.8844,-59.6754,-78.1855,-81.3911,0,-18.5046,-21.7119,-16.2933 0|1:24:10,1,1,12:10:394:1,1,12:39,39,485:-36.9858,-36.7912,-68.9009,-36.7912,-65.9965,-68.9009,0,-29.2124,-29.2124,-28.8056 0|1:40:13,4,2,19:13:503:4,2,19:156,78,757:-58.4501,-49.5393,-89.6512,-55.9514,-84.4434,-96.6653,0,-28.5074,-34.9211,-35.6148 0|1:53:24,2,3,24:24:939:2,3,24:74,110,966:-72.4128,-73.5859,-150.184,-70.6509,-141.798,-146.948,0,-71.1707,-68.2353,-69.9983 1|1:15:0,1,0,13:0:0:1,0,13:36,0,528:-47.4877,-44.5532,-44.2522,-47.4877,-44.5532,-47.4877,-3.91339,-0.990887,-3.91339,0 1|1:8:0,0,0,7:0:0:0,0,7:0,0,285:-25.624,-25.624,-25.624,-25.624,-25.624,-25.624,-2.10721,-2.10721,-2.10721,0 dDocent_Contig_13469 80 . C A 2416.32 . AB=0.305085;ABP=119.828;AC=6;AF=0.5;AN=12;AO=108;CIGAR=1X;DP=354;DPB=354;DPRA=0;EPP=6.95112;EPPR=7.28263;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.654472;PAO=0;PQA=0;PQR=0;PRO=0;QA=3972;QR=9028;RO=246;RPL=99;RPP=165.871;RPPR=453.864;RPR=9;RUN=1;SAF=52;SAP=3.332;SAR=56;SRF=124;SRP=3.04561;SRR=122;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:74:42,32:42:1575:32:1141:-80.6914,0,-119.73 0/1:76:58,18:58:2095:18:677:-38.3781,0,-165.896 0/1:34:22,12:22:787:12:420:-27.899,0,-60.9018 0/1:79:57,22:57:2093:22:821:-50.4236,0,-164.813 0/1:49:35,14:35:1319:14:533:-33.555,0,-104.226 0/1:42:32,10:32:1159:10:380:-21.9063,0,-91.9566 dDocent_Contig_13470 43 . C A 2795.43 . AB=0.429167;ABP=13.4696;AC=6;AF=0.5;AN=12;AO=103;CIGAR=1X;DP=240;DPB=240;DPRA=0;EPP=226.672;EPPR=250.669;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.543689;PAIREDR=0.671533;PAO=0;PQA=0;PQR=0;PRO=0;QA=4012;QR=5473;RO=137;RPL=0;RPP=226.672;RPPR=300.502;RPR=103;RUN=1;SAF=103;SAP=226.672;SAR=0;SRF=131;SRP=250.669;SRR=6;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:5,20:5:201:20:764:-61.5429,0,-10.9448 0/1:64:48,16:48:1918:16:644:-39.0277,0,-153.552 0/1:31:16,15:16:633:15:575:-42.7397,0,-47.9652 0/1:39:15,24:15:605:24:950:-74.0607,0,-43.0468 0/1:36:21,15:21:846:15:581:-41.7802,0,-65.6163 0/1:45:32,13:32:1270:13:498:-31.6137,0,-101.015 dDocent_Contig_13471 15 . T A 1378.98 . AB=0.251029;ABP=133.844;AC=5;AF=0.416667;AN=12;AO=61;CIGAR=1X;DP=250;DPB=250;DPRA=6.94286;EPP=135.47;EPPR=413.419;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2428;QR=7588;RO=189;RPL=0;RPP=135.47;RPPR=413.419;RPR=61;RUN=1;SAF=61;SAP=135.47;SAR=0;SRF=189;SRP=413.419;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:25,7:25:1005:7:283:-16.2104,0,-81.1081 0/1:54:43,11:43:1746:11:441:-23.7899,0,-141.096 0/1:71:56,15:56:2248:15:593:-32.3345,0,-181.108 0/1:71:53,18:53:2099:18:712:-43.0329,0,-167.719 0/0:7:7,0:7:285:0:0:0,-2.10721,-26.0242 0/1:15:5,10:5:205:10:399:-31.7521,0,-14.3196 dDocent_Contig_13472 174 . A T 382.926 . AB=0.276596;ABP=23.3852;AC=5;AF=0.416667;AN=12;AO=19;CIGAR=1X;DP=70;DPB=70;DPRA=2;EPP=44.2683;EPPR=113.755;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=7;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=672;QR=1968;RO=51;RPL=0;RPP=44.2683;RPPR=113.755;RPR=19;RUN=1;SAF=0;SAP=44.2683;SAR=19;SRF=0;SRP=113.755;SRR=51;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:18:13,5:13:497:5:185:-10.79,0,-2.83823 0/1:15:12,3:12:468:3:96:-4.10893,0,-3.11216 0/0:7:7,0:7:268:0:0:0,-2.10721,-4.47816 0/0:7:7,0:7:272:0:0:0,-2.10721,-4.47854 1/1:9:3,6:3:117:6:222:-17.4204,-0.749884,0 0/1:14:9,5:9:346:5:169:-10.6794,0,-1.52347 dDocent_Contig_13473 42 . C A 1363.15 . AB=0.356643;ABP=28.5365;AC=3;AF=0.25;AN=12;AO=52;CIGAR=1X;DP=249;DPB=249;DPRA=2.53659;EPP=115.927;EPPR=430.79;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2080;QR=7838;RO=197;RPL=0;RPP=115.927;RPPR=430.79;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=197;SRP=430.79;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:626:0:0:0,-4.81648,-56.6614 0/1:38:20,18:20:808:18:724:-54.0473,0,-61.5962 0/1:17:8,9:8:325:9:360:-27.6443,0,-24.5021 0/1:88:64,24:64:2545:24:956:-59.8449,0,-202.691 0/0:25:25,0:25:992:0:0:0,-7.52575,-89.5725 0/0:65:64,1:64:2542:1:40:0,-15.5713,-224.919 dDocent_Contig_13474 57 . T C 1016.75 . AB=0.239583;ABP=116.108;AC=3;AF=0.25;AN=12;AO=55;CIGAR=1X;DP=380;DPB=380;DPRA=0;EPP=122.441;EPPR=706.567;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.963636;PAIREDR=0.941358;PAO=0;PQA=0;PQR=0;PRO=0;QA=2167;QR=12103;RO=324;RPL=55;RPP=122.441;RPPR=706.567;RPR=0;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=324;SRP=706.567;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:47:45,2:45:1660:2:82:0,-6.36873,-141.875 0/1:100:70,29:70:2626:29:1159:-74.383,0,-206.324 0/1:36:32,4:32:1175:4:160:-3.94672,0,-95.1964 0/1:56:43,13:43:1638:13:501:-28.5662,0,-130.808 0/0:88:83,5:83:3130:5:184:0,-9.57676,-264.951 0/0:53:51,2:51:1874:2:81:0,-8.26886,-161.222 dDocent_Contig_13475 19 . C A 264.387 . AB=0.141935;ABP=175.621;AC=3;AF=0.25;AN=12;AO=28;CIGAR=1X;DP=265;DPB=265;DPRA=3.1125;EPP=63.8115;EPPR=517.649;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.531646;PAO=0;PQA=0;PQR=0;PRO=0;QA=1077;QR=9406;RO=237;RPL=0;RPP=63.8115;RPPR=517.649;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=237;SRP=517.649;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:622:0:0:0,-4.81648,-56.3126 0/1:43:33,10:33:1310:10:390:-22.5114,0,-105.224 0/0:30:29,1:29:1155:1:23:0,-6.73099,-101.933 0/1:37:33,4:33:1292:4:163:-3.92032,0,-105.407 0/0:64:59,5:59:2356:5:196:0,-1.25287,-194.185 0/1:75:67,8:67:2671:8:305:-5.22788,0,-217.939 dDocent_Contig_13477 108 . G A 409.57 . AB=0.315217;ABP=30.2953;AC=1;AF=0.1;AN=10;AO=30;CIGAR=1X;DP=343;DPB=343;DPRA=2.82353;EPP=68.1545;EPPR=678.338;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=785;QR=10442;RO=311;RPL=0;RPP=68.1545;RPPR=678.338;RPR=30;RUN=1;SAF=0;SAP=68.1545;SAR=30;SRF=0;SRP=678.338;SRR=311;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:56:56,0:56:1822:0:0:0,-16.8577,-164.25 0/0:132:131,1:131:4434:1:11:0,-38.636,-398.158 0/0:62:62,0:62:2059:0:0:0,-18.6639,-185.58 0/1:92:62,29:62:2127:29:774:-42.1781,0,-163.96 ./.:.:.:.:.:.:.:. 0/0:1:0,0:0:0:0:0:0,0,0 dDocent_Contig_13478 36 . T G 716.98 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=21;CIGAR=1M4I3M1X;DP=21;DPB=37.8;DPRA=0;EPP=48.6112;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=19.1613;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=793;QR=0;RO=0;RPL=0;RPP=48.6112;RPPR=0;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:21:0,21:0:0:21:793:-71.698,-6.32163,0 dDocent_Contig_13479 153 . C T 1806.98 . AB=0.557522;ABP=6.2579;AC=5;AF=0.416667;AN=12;AO=63;CIGAR=2X;DP=121;DPB=121;DPRA=2.825;EPP=139.813;EPPR=128.956;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.84127;PAIREDR=0.896552;PAO=0;PQA=0;PQR=0;PRO=0;QA=2469;QR=2281;RO=58;RPL=0;RPP=139.813;RPPR=128.956;RPR=63;RUN=1;SAF=0;SAP=139.813;SAR=63;SRF=0;SRP=128.956;SRR=58;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:8:8,0:8:318:0:0:0,-2.40824,-28.9867 0|1:6:4,2:4:160:2:76:-5.40808,0,-12.9776 0|1:24:20,4:20:782:4:161:-7.65076,0,-63.4789 0|1:18:8,10:8:316:10:394:-30.3997,0,-23.3867 0|1:13:5,8:5:190:8:313:-24.6197,0,-13.552 0|1:52:13,39:13:515:39:1525:-121.842,0,-31.0433 dDocent_Contig_13480 14 . A G 60.0503 . AB=0.3;ABP=6.48466;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=167;DPB=167;DPRA=1.92941;EPP=13.8677;EPPR=354.789;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=194;QR=6487;RO=162;RPL=0;RPP=13.8677;RPPR=354.789;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=162;SRP=354.789;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:72:70,2:70:2769:2:81:0,-13.9884,-241.63 0/0:25:25,0:25:1007:0:0:0,-7.52575,-90.9262 0/0:33:33,0:33:1342:0:0:0,-9.93399,-121.035 0/0:25:25,0:25:1001:0:0:0,-7.52575,-90.3874 0/0:2:2,0:2:82:0:0:0,-0.60206,-7.77968 0/1:10:7,3:7:286:3:113:-7.52773,0,-23.1045 dDocent_Contig_13481 57 . T C 326.082 . AB=0.2;ABP=57.7314;AC=4;AF=0.4;AN=10;AO=14;CIGAR=1X4M;DP=95;DPB=95;DPRA=4.2;EPP=33.4109;EPPR=165.871;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=5;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=567;QR=2922;RO=75;RPL=14;RPP=33.4109;RPPR=165.871;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=75;SRP=165.871;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:19:19,0,0:19:713:0,0:0,0:0,-5.71957,-64.4898,-5.71957,-64.4898,-64.4898 0|0:5:5,0,0:5:192:0,0:0,0:0,-1.50515,-17.6486,-1.50515,-17.6486,-17.6486 0|1:14:12,0,2:12:482:0,2:0,80:-3.37737,-6.98973,-46.7099,0,-40.12,-39.5179 0|1:56:39,4,12:39:1535:4,12:156,487:-28.4327,-27.354,-152.411,0,-113.449,-122.658 .:.:.:.:.:.:.:. 1|1:1:0,1,0:0:0:1,0:41,0:-4.09457,-0.30103,0,-4.09457,-0.30103,-4.09457 dDocent_Contig_13482 1 . N G 555.464 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=15;CIGAR=1X;DP=15;DPB=15;DPRA=0;EPP=35.5824;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=589;QR=0;RO=0;RPL=0;RPP=35.5824;RPPR=0;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:4:0,4:0:0:4:161:-14.8749,-1.20412,0 1/1:2:0,2:0:0:2:79:-7.49724,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:30:-2.99957,-0.30103,0 1/1:4:0,4:0:0:4:161:-14.8755,-1.20412,0 1/1:4:0,4:0:0:4:158:-14.5994,-1.20412,0 dDocent_Contig_13483 65 . T C 1086.44 . AB=0.136513;ABP=700.753;AC=4;AF=0.333333;AN=12;AO=105;CIGAR=1X;DP=944;DPB=944;DPRA=0;EPP=231.015;EPPR=1824.88;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.559;NS=6;NUMALT=1;ODDS=0;PAIRED=0.847619;PAIREDR=0.871275;PAO=0;PQA=0;PQR=0;PRO=0;QA=4193;QR=33151;RO=839;RPL=105;RPP=231.015;RPPR=1824.88;RPR=0;RUN=1;SAF=105;SAP=231.015;SAR=0;SRF=839;SRP=1824.88;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:95:86,9:86:3362:9:345:-2.80565,0,-274.029 0/0:187:176,11:176:6941:11:445:0,-15.8865,-575.322 0/1:157:136,21:136:5372:21:843:-28.9211,0,-436.066 0/0:149:138,11:138:5461:11:441:0,-4.80756,-451.286 0/1:141:126,15:126:5010:15:598:-11.7142,0,-402.749 0/1:215:177,38:177:7005:38:1521:-72.4141,0,-563.686 dDocent_Contig_13484 7 . A G 8406.29 . AB=0.530576;ABP=7.52509;AC=6;AF=0.5;AN=12;AO=295;CIGAR=1X1M1X;DP=556;DPB=556;DPRA=0;EPP=643.595;EPPR=315.702;GTI=0;LEN=1;MEANALT=3.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.976271;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10107;QR=5482;RO=144;RPL=0;RPP=643.595;RPPR=315.702;RPR=295;RUN=1;SAF=295;SAP=643.595;SAR=0;SRF=144;SRP=315.702;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:101:30,64,3:30:1118:64,3:2173,116:-167.189,0,-72.2958,-166.69,-82.0312,-257.313 1|0:115:20,57,36:20:769:57,36:1967,1382:-204.047,-50.3123,-96.2907,-96.6101,0,-148.918 0|1:145:52,57,34:52:1984:57,34:1945,1308:-142.117,0,-145.611,-50.3677,-55.381,-202.921 1|0:151:27,92,30:27:1033:92,30:3132,1168:-257.11,-11.2339,-68.3122,-169.228,0,-244.978 0|1:23:15,8,0:15:578:8,0:304,0:-20.7956,0,-45.4391,-25.3111,-47.8474,-72.7769 1|0:21:0,17,4:0:0:17,4:586,154:-60.592,-13.0293,-7.91183,-47.9397,0,-46.7356 dDocent_Contig_13485 27 . G A 204.201 . AB=0.32;ABP=10.0459;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=245;DPB=245;DPRA=0.568182;EPP=20.3821;EPPR=517.649;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=320;QR=9432;RO=237;RPL=0;RPP=20.3821;RPPR=517.649;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=237;SRP=517.649;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:17,8:17:683:8:320:-21.6419,0,-54.2744 0/0:36:36,0:36:1435:0:0:0,-10.8371,-129.402 0/0:47:47,0:47:1881:0:0:0,-14.1484,-169.483 0/0:48:48,0:48:1924:0:0:0,-14.4494,-173.36 0/0:35:35,0:35:1402:0:0:0,-10.536,-126.434 0/0:54:54,0:54:2107:0:0:0,-16.2556,-189.809 dDocent_Contig_13486 26 . G A 581.646 . AB=0.172414;ABP=30.0414;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1M3I1X4M1X4M1X2M1X2M;DP=74;DPB=70.4118;DPRA=1.20833;EPP=13.8677;EPPR=92.0407;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0;PAIREDR=0.95122;PAO=0;PQA=0;PQR=0;PRO=0;QA=194;QR=1554;RO=41;RPL=0;RPP=13.8677;RPPR=92.0407;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=41;SRP=92.0407;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:12:12,0,0,0,0:12:455:0,0,0,0:0,0,0,0:0,-3.61236,-41.2986,-3.61236,-41.2986,-41.2986,-3.61236,-41.2986,-41.2986,-41.2986,-3.61236,-41.2986,-41.2986,-41.2986,-41.2986 0|0:12:12,0,0,0,0:12:445:0,0,0,0:0,0,0,0:0,-3.61236,-40.3926,-3.61236,-40.3926,-40.3926,-3.61236,-40.3926,-40.3926,-40.3926,-3.61236,-40.3926,-40.3926,-40.3926,-40.3926 0|0:14:7,3,0,0,4:7:272:3,0,0,4:120,0,0,159:-10.9837,-3.26367,-24.7067,-13.0909,-25.6098,-35.4382,-13.0909,-25.6098,-35.4382,-35.4382,0,-12.5155,-22.3454,-22.3454,-21.1412 0|1:6:4,0,0,2,0:4:153:0,0,2,0:0,0,77,0:-5.50296,-6.70708,-19.2607,-6.70708,-19.2607,-19.2607,0,-12.9375,-12.9375,-12.3354,-6.70708,-19.2607,-19.2607,-12.9375,-19.2607 0|0:7:0,3,3,0,1:0:0:3,3,0,1:119,111,0,36:-18.485,-8.67818,-7.77509,-9.81688,0,-8.91379,-18.485,-8.67818,-9.81688,-18.485,-15.5498,-5.73955,-6.88851,-15.5498,-15.2488 0|0:23:6,10,0,3,4:6:229:10,0,3,4:392,0,117,153:-30.4147,0,-15.776,-32.2209,-18.7863,-51.0071,-22.6035,-9.16732,-41.3895,-40.4864,-19.6685,-6.23252,-38.4537,-28.8362,-37.2496 dDocent_Contig_13487 108 . A G 203.065 . AB=0.5;ABP=3.0103;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=119;DPB=119;DPRA=0.356436;EPP=22.5536;EPPR=241.872;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.990909;PAO=0;PQA=0;PQR=0;PRO=0;QA=314;QR=3691;RO=110;RPL=0;RPP=22.5536;RPPR=241.872;RPR=9;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=241.872;SRR=110;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:933:0:0:0,-8.12781,-84.2847 0/0:5:5,0:5:169:0:0:0,-1.50515,-15.543 0/1:8:3,5:3:103:5:174:-13.5937,0,-7.20178 0/1:10:6,4:6:209:4:140:-9.93463,0,-16.1408 0/0:49:49,0:49:1620:0:0:0,-14.7505,-146.082 0/0:20:20,0:20:657:0:0:0,-6.0206,-59.4382 dDocent_Contig_13488 32 . T C 252.627 . AB=0.151079;ABP=149.999;AC=5;AF=0.416667;AN=12;AO=21;CIGAR=1X;DP=189;DPB=189;DPRA=0.556;EPP=40.3389;EPPR=359.183;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.904762;PAIREDR=0.988095;PAO=0;PQA=0;PQR=0;PRO=0;QA=827;QR=6671;RO=168;RPL=2;RPP=32.8939;RPPR=350.653;RPR=19;RUN=1;SAF=20;SAP=40.3389;SAR=1;SRF=167;SRP=359.183;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:31:26,5:26:1020:5:185:-7.6729,0,-82.7597 0/1:20:17,3:17:678:3:119:-5.0739,0,-55.3248 0/1:26:22,4:22:891:4:155:-6.49648,0,-72.6701 0/1:21:16,5:16:642:5:204:-12.4224,0,-51.7884 0/0:50:50,0:50:1962:0:0:0,-15.0515,-176.778 0/1:41:37,4:37:1478:4:164:-2.80767,0,-120.918 dDocent_Contig_13489 51 . T C 9984.88 . AB=0.507463;ABP=3.3344;AC=7;AF=0.583333;AN=12;AO=341;CIGAR=1X;DP=671;DPB=671;DPRA=0;EPP=743.482;EPPR=719.596;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13426;QR=13076;RO=330;RPL=341;RPP=743.482;RPPR=719.596;RPR=0;RUN=1;SAF=341;SAP=743.482;SAR=0;SRF=330;SRP=719.596;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:109:30,79:30:1198:79:3136:-249.514,0,-75.2781 0/1:190:100,90:100:3954:90:3500:-257.853,0,-298.647 0/1:171:82,89:82:3267:89:3472:-261.073,0,-242.602 0/1:196:117,79:117:4616:79:3160:-225.467,0,-356.363 1/1:1:0,1:0:0:1:40:-3.99568,-0.30103,0 0/1:4:1,3:1:41:3:118:-9.79839,0,-2.89045 dDocent_Contig_13490 8 . C T 64.0174 . AB=0.185185;ABP=26.2531;AC=2;AF=0.166667;AN=12;AO=5;CIGAR=1X;DP=107;DPB=107;DPRA=0.675;EPP=3.44459;EPPR=175.451;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=58.8627;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.637255;PAO=0;PQA=0;PQR=0;PRO=0;QA=189;QR=3900;RO=102;RPL=0;RPP=13.8677;RPPR=224.5;RPR=5;RUN=1;SAF=3;SAP=3.44459;SAR=2;SRF=96;SRP=175.451;SRR=6;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:15:12,3:12:466:3:117:-6.39493,0,-37.7766 0/0:15:15,0:15:556:0:0:0,-4.51545,-50.2844 0/0:16:16,0:16:605:0:0:0,-4.81648,-54.5361 0/0:22:22,0:22:845:0:0:0,-6.62266,-76.2174 0/1:12:10,2:10:388:2:72:-3.22436,0,-31.6655 0/0:27:27,0:27:1040:0:0:0,-8.12781,-93.9049 dDocent_Contig_13491 14 . G A 13750.3 . AB=0.514477;ABP=4.64495;AC=6;AF=0.5;AN=12;AO=462;CIGAR=1X2M;DP=898;DPB=898;DPRA=0;EPP=1006.23;EPPR=897.657;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=18333;QR=16112;RO=412;RPL=0;RPP=1006.23;RPPR=897.657;RPR=462;RUN=1;SAF=462;SAP=1006.23;SAR=0;SRF=412;SRP=897.657;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:87:32,0,55:32:1239:0,55:0,2172:-169.473,-179.106,-280.873,0,-102.156,-85.5992 0|1:147:31,0,116:31:1212:0,116:0,4527:-363.134,-372.466,-472.099,0,-100.023,-65.1039 0|1:124:63,0,61:63:2504:0,61:0,2445:-182.864,-201.829,-407.973,0,-206.543,-188.18 0|1:190:62,0,126:62:2412:0,126:0,5038:-396.342,-415.006,-613.198,0,-198.228,-160.298 0|1:194:103,16,74:103:4053:16,74:646,2945:-211.468,-189.218,-517.769,0,-280.109,-311.089 0|1:156:121,5,30:121:4692:5,30:197,1206:-62.9656,-83.1853,-467.097,0,-369.216,-376.391 dDocent_Contig_13492 55 . G A 1068.96 . AB=0.369565;ABP=23.4033;AC=2;AF=0.166667;AN=12;AO=51;CIGAR=1X;DP=402;DPB=402;DPRA=1.04545;EPP=113.755;EPPR=763.026;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.627451;PAIREDR=0.682857;PAO=0;PQA=0;PQR=0;PRO=0;QA=1679;QR=12441;RO=350;RPL=24;RPP=3.3935;RPPR=18.5208;RPR=27;RUN=1;SAF=24;SAP=3.3935;SAR=27;SRF=200;SRP=18.5208;SRR=150;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:55:54,0:54:1886:0:0:0,-16.2556,-169.915 0/0:77:77,0:77:2611:0:0:0,-23.1793,-235.202 0/0:64:64,0:64:2345:0:0:0,-19.2659,-211.234 0/0:68:68,0:68:2388:0:0:0,-20.47,-215.11 0/1:61:48,13:48:1766:13:431:-20.7319,0,-140.817 0/1:77:39,38:39:1445:38:1248:-89.3858,0,-107.13 dDocent_Contig_13493 23 . T G 2082.4 . AB=0.176471;ABP=126.656;AC=2;AF=0.166667;AN=12;AO=24;CIGAR=1M1D3M1X3M;DP=205;DPB=195;DPRA=0;EPP=55.1256;EPPR=250.558;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.692982;PAO=0;PQA=0;PQR=0;PRO=0;QA=928;QR=4532;RO=114;RPL=0;RPP=55.1256;RPPR=250.558;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=114;SRP=250.558;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:32:16,0,16:16:634:0,16:0,626:-47.0387,-51.8552,-104.041,0,-52.5789,-47.7624 0|0:39:24,1,14:24:956:1,14:38,546:-37.6578,-41.7667,-120.195,0,-75.6257,-74.527 0|0:37:14,0,22:14:561:0,22:0,860:-66.4593,-70.6737,-116.896,0,-46.2106,-39.5879 0|0:37:24,4,9:24:952:4,9:162,327:-19.4428,-13.2964,-90.4794,0,-64.9963,-75.6465 0|1:23:13,8,2:13:512:8,2:290,80:-19.7298,0,-39.7058,-17.0456,-35.5231,-58.5823 0|1:37:23,11,3:23:917:11,3:438,123:-29.1337,0,-72.1946,-25.9026,-65.3524,-100.516 dDocent_Contig_13494 10 . T C 1356.01 . AB=0.306818;ABP=60.0608;AC=5;AF=0.416667;AN=12;AO=54;CIGAR=1X;DP=225;DPB=225;DPRA=0.718367;EPP=120.27;EPPR=374.332;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994152;PAO=0;PQA=0;PQR=0;PRO=0;QA=2178;QR=6856;RO=171;RPL=0;RPP=120.27;RPPR=374.332;RPR=54;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=171;SRP=374.332;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:19,3:19:761:3:122:-4.74983,0,-62.1895 0/0:49:49,0:49:1955:0:0:0,-14.7505,-176.144 0/1:27:23,4:23:926:4:163:-6.93062,0,-75.5173 0/1:51:42,9:42:1704:9:359:-17.3197,0,-138.223 0/1:38:19,19:19:754:19:770:-58.1813,0,-56.7406 0/1:38:19,19:19:756:19:764:-57.6413,0,-56.9195 dDocent_Contig_13495 15 . C G 189.568 . AB=0.163043;ABP=93.7401;AC=4;AF=0.333333;AN=12;AO=17;CIGAR=1X;DP=169;DPB=169;DPRA=0.604762;EPP=39.9253;EPPR=333.074;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.941176;PAIREDR=0.763158;PAO=0;PQA=0;PQR=0;PRO=0;QA=663;QR=6153;RO=152;RPL=0;RPP=39.9253;RPPR=333.074;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=152;SRP=333.074;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:29,4:29:1168:4:161:-4.94091,0,-95.462 0/1:16:13,3:13:522:3:106:-5.06661,0,-42.5102 0/1:12:10,2:10:409:2:82:-4.16732,0,-33.5582 0/1:31:25,6:25:1025:6:233:-12.0031,0,-83.2053 0/0:35:33,2:33:1323:2:81:0,-2.85032,-111.644 0/0:42:42,0:42:1706:0:0:0,-12.6433,-153.755 dDocent_Contig_13496 11 . A T 176.008 . AB=0.139535;ABP=148.6;AC=3;AF=0.25;AN=12;AO=22;CIGAR=1X;DP=248;DPB=248;DPRA=0;EPP=12.8806;EPPR=225;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.69469;PAO=0;PQA=0;PQR=0;PRO=0;QA=788;QR=8676;RO=226;RPL=0;RPP=50.7827;RPPR=493.763;RPR=22;RUN=1;SAF=6;SAP=12.8806;SAR=16;SRF=189;SRP=225;SRR=37;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:28,4:28:1062:4:137:-3.03525,0,-86.2237 0/0:44:43,1:43:1626:1:26:0,-10.6455,-143.972 0/0:33:31,2:31:1155:2:70:0,-3.28659,-97.5794 0/1:53:43,10:43:1676:10:371:-17.7799,0,-135.112 0/0:42:41,1:41:1594:1:40:0,-8.64758,-139.695 0/1:44:40,4:40:1563:4:144:-0.0663725,0,-127.671 dDocent_Contig_13497 21 . C T 791.401 . AB=0.288288;ABP=46.2246;AC=2;AF=0.166667;AN=12;AO=32;CIGAR=1X;DP=282;DPB=282;DPRA=1.29825;EPP=72.4974;EPPR=545.878;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.64;PAO=0;PQA=0;PQR=0;PRO=0;QA=1279;QR=9879;RO=250;RPL=0;RPP=72.4974;RPPR=545.878;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=250;SRP=545.878;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:1149:0:0:0,-8.72987,-103.697 0/0:49:49,0:49:1916:0:0:0,-14.7505,-172.657 0/0:23:23,0:23:924:0:0:0,-6.92369,-83.4653 0/1:52:42,10:42:1677:10:403:-20.9763,0,-135.506 0/1:59:37,22:37:1476:22:876:-61.3856,0,-115.329 0/0:70:70,0:70:2737:0:0:0,-21.0721,-246.473 dDocent_Contig_13498 59 . G A 374.311 . AB=0.269841;ABP=31.9977;AC=3;AF=0.25;AN=12;AO=17;CIGAR=1X;DP=103;DPB=103;DPRA=1.575;EPP=39.9253;EPPR=189.757;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.941176;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=651;QR=3378;RO=86;RPL=17;RPP=39.9253;RPPR=189.757;RPR=0;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=86;SRP=189.757;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:13:12,1:12:462:1:40:-0.0822893,0,-38.01 0/0:18:18,0:18:694:0:0:0,-5.41854,-62.7883 0/1:18:13,5:13:521:5:197:-12.687,0,-41.8185 0/1:32:21,11:21:833:11:414:-27.9651,0,-65.6479 0/0:9:9,0:9:351:0:0:0,-2.70927,-31.9448 0/0:13:13,0:13:517:0:0:0,-3.91339,-46.8772 dDocent_Contig_13499 10 . G A 72.0078 . AB=0.172414;ABP=30.0414;AC=2;AF=0.166667;AN=12;AO=5;CIGAR=1X;DP=718;DPB=718;DPRA=0.08418;EPP=13.8677;EPPR=1549.1;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=204;QR=28296;RO=712;RPL=0;RPP=13.8677;RPPR=1549.1;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=712;SRP=1549.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:360:0:0:0,-2.70927,-32.7633 0/1:7:5,2:5:189:2:82:-5.67247,0,-15.2665 0/0:2:2,0:2:73:0:0:0,-0.60206,-6.92919 0/1:22:19,3:19:743:3:122:-4.74983,0,-60.5606 0/0:386:386,0:386:15347:0:0:0,-116.198,-1380.09 0/0:292:291,0:291:11584:0:0:0,-87.5997,-1041.39 dDocent_Contig_13500 66 . A G 171.019 . AB=0.217391;ABP=34.9215;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=227;DPB=227;DPRA=2.45098;EPP=26.8965;EPPR=472.048;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0909091;PAIREDR=0.569444;PAO=0;PQA=0;PQR=0;PRO=0;QA=393;QR=7410;RO=216;RPL=11;RPP=26.8965;RPPR=472.048;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=216;SRP=472.048;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:342:0:0:0,-3.0103,-31.1105 0/0:19:19,0:19:604:0:0:0,-5.71957,-54.6589 0/0:40:40,0:40:1394:0:0:0,-12.0412,-125.755 0/0:33:33,0:33:1148:0:0:0,-9.93399,-103.624 0/1:46:36,10:36:1232:10:357:-18.6248,0,-97.3283 0/0:79:78,1:78:2690:1:36:0,-20.1831,-238.743 dDocent_Contig_13501 12 . C A 44.3871 . AB=0.133333;ABP=38.0434;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=230;DPB=230;DPRA=0.75;EPP=11.6962;EPPR=493.763;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.451327;PAO=0;PQA=0;PQR=0;PRO=0;QA=159;QR=8931;RO=226;RPL=0;RPP=11.6962;RPPR=493.763;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=226;SRP=493.763;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:26,4:26:1024:4:159:-5.66054,0,-83.4251 0/0:42:42,0:42:1671:0:0:0,-12.6433,-150.625 0/0:26:26,0:26:1034:0:0:0,-7.82678,-93.3559 0/0:57:57,0:57:2260:0:0:0,-17.1587,-203.575 0/0:24:24,0:24:916:0:0:0,-7.22472,-82.7422 0/0:51:51,0:51:2026:0:0:0,-15.3525,-182.537 dDocent_Contig_13502 31 . T A 177.549 . AB=0.35;ABP=6.91895;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=186;DPB=186;DPRA=0.735294;EPP=22.5536;EPPR=387.361;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.444444;PAIREDR=0.485876;PAO=0;PQA=0;PQR=0;PRO=0;QA=358;QR=7004;RO=177;RPL=0;RPP=22.5536;RPPR=387.361;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=177;SRP=387.361;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1640:0:0:0,-12.3422,-147.828 0/0:30:28,2:28:1123:2:81:0,-1.34517,-93.6707 0/1:20:13,7:13:524:7:277:-19.2777,0,-41.4858 0/0:52:52,0:52:2023:0:0:0,-15.6536,-182.263 0/0:18:18,0:18:702:0:0:0,-5.41854,-63.5009 0/0:25:25,0:25:992:0:0:0,-7.52575,-89.576 dDocent_Contig_13503 11 . G A 3265.1 . AB=0.528037;ABP=4.47148;AC=2;AF=0.166667;AN=12;AO=118;CIGAR=1X;DP=684;DPB=684;DPRA=0.9;EPP=259.244;EPPR=1232.06;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.0989;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.980565;PAO=0;PQA=0;PQR=0;PRO=0;QA=4572;QR=22633;RO=566;RPL=0;RPP=259.244;RPPR=1232.06;RPR=118;RUN=1;SAF=118;SAP=259.244;SAR=0;SRF=566;SRP=1232.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:110:105,5:105:4199:5:197:0,-15.0071,-359.773 0/0:171:171,0:171:6829:0:0:0,-51.4761,-614.304 0/0:79:79,0:79:3171:0:0:0,-23.7814,-285.458 0/0:110:110,0:110:4425:0:0:0,-33.1133,-398.185 0/1:110:44,66:44:1742:66:2575:-198.802,0,-110.45 0/1:104:57,47:57:2267:47:1800:-130.929,0,-157.76 dDocent_Contig_13505 25 . C T 34406.9 . AB=0.871383;ABP=1493.32;AC=6;AF=0.5;AN=12;AO=1084;CIGAR=1X;DP=1244;DPB=1244;DPRA=0;EPP=2356.89;EPPR=343.931;GTI=0;LEN=1;MEANALT=1.33333;MQM=59.9935;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.2131;PAIREDR=0.343949;PAO=0;PQA=0;PQR=0;PRO=0;QA=42533;QR=6186;RO=157;RPL=0;RPP=2356.89;RPPR=343.931;RPR=1084;RUN=1;SAF=1084;SAP=2356.89;SAR=0;SRF=157;SRP=343.931;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:175:33,141:33:1303:141:5517:-443.652,0,-64.7961 0/1:240:33,205:33:1313:205:8024:-649.772,0,-46.4257 0/1:135:18,117:18:679:117:4612:-374.391,0,-20.7868 0/1:218:22,196:22:882:196:7697:-626.758,0,-14.0653 0/1:203:22,181:22:867:181:7087:-576.429,0,-17.2322 0/1:273:29,244:29:1142:244:9596:-780.911,0,-20.8821 dDocent_Contig_13506 35 . C T 65.4621 . AB=0.181818;ABP=22.3561;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=133;DPB=133;DPRA=0.990991;EPP=11.6962;EPPR=283.13;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.72093;PAO=0;PQA=0;PQR=0;PRO=0;QA=159;QR=5143;RO=129;RPL=0;RPP=11.6962;RPPR=283.13;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=129;SRP=283.13;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:852:0:0:0,-6.32163,-76.9911 0/0:26:26,0:26:1044:0:0:0,-7.82678,-94.2521 0/0:10:10,0:10:400:0:0:0,-3.0103,-36.3594 0/0:32:32,0:32:1281:0:0:0,-9.63296,-115.555 0/0:22:22,0:22:850:0:0:0,-6.62266,-76.8102 0/1:22:18,4:18:716:4:159:-8.06909,0,-58.1405 dDocent_Contig_13507 25 . G A 76.7071 . AB=0.142857;ABP=72.8076;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=125;DPB=125;DPRA=2.03226;EPP=22.5536;EPPR=254.901;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.111111;PAIREDR=0.913793;PAO=0;PQA=0;PQR=0;PRO=0;QA=324;QR=4637;RO=116;RPL=0;RPP=22.5536;RPPR=254.901;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=116;SRP=254.901;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:13:13,0:13:518:0:0:0,-3.91339,-46.9633 0/0:36:36,0:36:1434:0:0:0,-10.8371,-129.314 0/0:8:8,0:8:308:0:0:0,-2.40824,-28.0788 0/0:5:5,0:5:194:0:0:0,-1.50515,-17.8285 0/1:30:25,5:25:1003:5:168:-6.41045,0,-81.5312 0/1:33:29,4:29:1180:4:156:-4.48184,0,-96.5372 dDocent_Contig_13508 107 . N T 646.949 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=41;CIGAR=1X;DP=41;DPB=41;DPRA=0;EPP=92.0407;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=18.6585;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1255;QR=0;RO=0;RPL=0;RPP=92.0407;RPPR=0;RPR=41;RUN=1;SAF=0;SAP=92.0407;SAR=41;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:3:0,3:0:0:3:103:-3.63148,-0.90309,0 1/1:7:0,7:0:0:7:204:-13.905,-2.10721,0 1/1:16:0,16:0:0:16:494:-19.1893,-4.81648,0 1/1:4:0,4:0:0:4:134:-6.25274,-1.20412,0 1/1:5:0,5:0:0:5:171:-11.923,-1.50515,0 1/1:6:0,6:0:0:6:149:-8.9481,-1.80618,0 dDocent_Contig_13509 9 . A G 5916.49 . AB=0.657051;ABP=69.8527;AC=6;AF=0.5;AN=12;AO=205;CIGAR=1X;DP=312;DPB=312;DPRA=0;EPP=448.162;EPPR=235.358;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.4;PAIREDR=0.457944;PAO=0;PQA=0;PQR=0;PRO=0;QA=7723;QR=4090;RO=107;RPL=0;RPP=448.162;RPPR=235.358;RPR=205;RUN=1;SAF=205;SAP=448.162;SAR=0;SRF=107;SRP=235.358;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:20,17:20:754:17:658:-48.419,0,-57.0463 0/1:68:16,52:16:612:52:1974:-157.432,0,-34.9487 0/1:62:17,45:17:653:45:1678:-132.609,0,-40.4435 0/1:53:22,31:22:847:31:1162:-88.9224,0,-60.5981 0/1:28:11,17:11:426:17:639:-49.4135,0,-30.266 0/1:64:21,43:21:798:43:1612:-126.075,0,-52.8772 dDocent_Contig_13510 33 . A T 3445.58 . AB=0.252129;ABP=316.268;AC=3;AF=0.25;AN=12;AO=169;CIGAR=1X;DP=1303;DPB=1303;DPRA=0;EPP=369.989;EPPR=2465.46;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.976331;PAIREDR=0.940917;PAO=0;PQA=0;PQR=0;PRO=0;QA=6689;QR=44776;RO=1134;RPL=0;RPP=369.989;RPPR=2465.46;RPR=169;RUN=1;SAF=169;SAP=369.989;SAR=0;SRF=1134;SRP=2465.46;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:149:98,51:98:3896:51:2006:-135.888,0,-305.792 0/0:239:220,19:220:8706:19:764:0,-2.86376,-713.987 0/1:137:99,38:99:3896:38:1509:-94.8168,0,-309.404 0/1:301:242,59:242:9496:59:2328:-119.074,0,-763.489 0/0:255:254,1:254:10040:1:41:0,-72.6681,-898.889 0/0:222:221,1:221:8742:1:41:0,-62.7341,-782.197 dDocent_Contig_13513 46 . C T 602.578 . AB=0.265306;ABP=49.8964;AC=3;AF=0.25;AN=12;AO=30;CIGAR=1X;DP=191;DPB=191;DPRA=1.328;EPP=68.1545;EPPR=350.446;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.733333;PAIREDR=0.99375;PAO=0;PQA=0;PQR=0;PRO=0;QA=1202;QR=6326;RO=160;RPL=0;RPP=68.1545;RPPR=350.446;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=160;SRP=350.446;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:14,12:14:538:12:483:-35.9932,0,-40.9277 0/1:47:37,9:37:1493:9:358:-18.6322,0,-120.688 0/1:25:20,5:20:794:5:200:-10.854,0,-64.2484 0/0:29:28,1:28:1114:1:40:0,-4.73419,-96.5478 0/0:39:36,3:36:1375:3:121:0,-0.460184,-112.708 0/0:25:25,0:25:1012:0:0:0,-7.52575,-91.3736 dDocent_Contig_13514 10 . C G 54.0774 . AB=0.142857;ABP=34.0313;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=156;DPB=156;DPRA=1.09375;EPP=11.6962;EPPR=333.074;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.993421;PAO=0;PQA=0;PQR=0;PRO=0;QA=163;QR=6144;RO=152;RPL=0;RPP=11.6962;RPPR=333.074;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=152;SRP=333.074;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:24,4:24:976:4:163:-6.62959,0,-79.7067 0/0:44:44,0:44:1783:0:0:0,-13.2453,-160.678 0/0:18:18,0:18:715:0:0:0,-5.41854,-64.6739 0/0:29:29,0:29:1171:0:0:0,-8.72987,-105.666 0/0:10:10,0:10:405:0:0:0,-3.0103,-36.81 0/0:27:27,0:27:1094:0:0:0,-8.12781,-98.7453 dDocent_Contig_13515 22 . A T 31.0321 . AB=0.125;ABP=42.0968;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=162;DPB=162;DPRA=1.23077;EPP=11.6962;EPPR=346.103;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.917722;PAO=0;PQA=0;PQR=0;PRO=0;QA=151;QR=6208;RO=158;RPL=0;RPP=11.6962;RPPR=346.103;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=158;SRP=346.103;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:28,4:28:1098:4:151:-4.32471,0,-89.4786 0/0:24:24,0:24:929:0:0:0,-7.22472,-83.9168 0/0:18:18,0:18:709:0:0:0,-5.41854,-64.1373 0/0:33:33,0:33:1311:0:0:0,-9.93399,-118.256 0/0:28:28,0:28:1095:0:0:0,-8.42884,-98.8422 0/0:27:27,0:27:1066:0:0:0,-8.12781,-96.2309 dDocent_Contig_13516 11 . T A 11772.8 . AB=0.412463;ABP=70.3002;AC=6;AF=0.5;AN=12;AO=417;CIGAR=1X;DP=1011;DPB=1011;DPRA=0;EPP=908.514;EPPR=1292.86;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=16580;QR=23875;RO=594;RPL=0;RPP=908.514;RPPR=1292.86;RPR=417;RUN=1;SAF=417;SAP=908.514;SAR=0;SRF=594;SRP=1292.86;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:126:62,64:62:2502:64:2550:-191.706,0,-187.379 0/1:145:111,34:111:4430:34:1304:-73.9667,0,-354.979 0/1:123:76,47:76:3039:47:1872:-131.658,0,-236.564 0/1:205:137,68:137:5520:68:2735:-184.543,0,-434.892 0/1:227:83,144:83:3323:144:5738:-447.878,0,-230.786 0/1:185:125,60:125:5061:60:2381:-158.752,0,-399.649 dDocent_Contig_13517 8 . C T 46.6981 . AB=0.109589;ABP=99.6557;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=328;DPB=328;DPRA=1.3427;EPP=31.2394;EPPR=665.42;GTI=0;LEN=1;MEANALT=1.25;MQM=41;MQMR=51.1597;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.594249;PAO=0;PQA=0;PQR=0;PRO=0;QA=507;QR=12030;RO=313;RPL=0;RPP=31.2394;RPPR=682.681;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=311;SRP=665.42;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:46,2:46:1783:2:78:0,-7.61134,-150.873 0/0:75:74,1:74:2823:1:39:0,-18.7186,-247.639 0/0:45:45,0:45:1737:0:0:0,-13.5463,-147.979 0/1:73:65,8:65:2497:8:312:-6.19268,0,-184.415 0/0:44:44,0:44:1700:0:0:0,-13.2453,-132.494 0/0:43:39,2:39:1490:2:78:0,-11.1226,-122.021 dDocent_Contig_13518 35 . A G 529.714 . AB=0.293333;ABP=30.8341;AC=3;AF=0.25;AN=12;AO=23;CIGAR=1X;DP=151;DPB=151;DPRA=1.01;EPP=52.9542;EPPR=280.959;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.956522;PAIREDR=0.921875;PAO=0;PQA=0;PQR=0;PRO=0;QA=926;QR=5074;RO=128;RPL=0;RPP=52.9542;RPPR=280.959;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=128;SRP=280.959;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:16,14:16:644:14:564:-42.0712,0,-49.2639 0/1:15:13,2:13:512:2:82:-3.26423,0,-41.9078 0/0:26:25,1:25:988:1:41:0,-3.73221,-85.1208 0/1:30:24,6:24:923:6:239:-12.8539,0,-74.3397 0/0:23:23,0:23:931:0:0:0,-6.92369,-84.0933 0/0:27:27,0:27:1076:0:0:0,-8.12781,-97.13 dDocent_Contig_13519 40 . C A 90.201 . AB=0.266667;ABP=10.1038;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=155;DPB=155;DPRA=0.535714;EPP=11.6962;EPPR=330.903;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.629139;PAO=0;PQA=0;PQR=0;PRO=0;QA=163;QR=6034;RO=151;RPL=0;RPP=11.6962;RPPR=330.903;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=151;SRP=330.903;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:751:0:0:0,-5.71957,-67.9007 0/0:31:31,0:31:1244:0:0:0,-9.33193,-112.229 0/0:37:37,0:37:1479:0:0:0,-11.1381,-133.351 0/0:22:22,0:22:878:0:0:0,-6.62266,-79.3256 0/1:15:11,4:11:438:4:163:-10.543,0,-35.2573 0/0:31:31,0:31:1244:0:0:0,-9.33193,-112.226 dDocent_Contig_13520 53 . T A 150.843 . AB=0.211538;ABP=40.5935;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=380;DPB=380;DPRA=0.792683;EPP=26.8965;EPPR=804.284;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=355;QR=11770;RO=369;RPL=11;RPP=26.8965;RPPR=804.284;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=369;SRP=804.284;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:68:68,0:68:2125:0:0:0,-20.47,-191.512 0/0:85:85,0:85:2687:0:0:0,-25.5875,-242.078 0/0:53:53,0:53:1718:0:0:0,-15.9546,-154.899 0/0:87:87,0:87:2798:0:0:0,-26.1896,-252.07 0/0:35:35,0:35:1126:0:0:0,-10.536,-101.631 0/1:52:41,11:41:1316:11:355:-16.6072,0,-103.068 dDocent_Contig_13521 39 . C A 2313.19 . AB=0.0142857;ABP=720.217;AC=0;AF=0;AN=12;AO=5;CIGAR=1M4I19M13D1M;DP=504;DPB=498.912;DPRA=0;EPP=13.8677;EPPR=374.332;GTI=0;LEN=1;MEANALT=32.75;MQM=60;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=121;QR=6043;RO=171;RPL=0;RPP=13.8677;RPPR=374.332;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=171;SRP=374.332;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:64:0,0,0,6,1,7,7,0,0,4:0:0:0,0,6,1,7,7,0,0,4:0,0,193,24,83,239,0,0,162:-34.9913,-34.9913,-34.9913,-34.9913,-34.9913,-34.9913,-19.4195,-19.4195,-19.4195,-17.6133,-33.1315,-33.1315,-33.1315,-17.5593,-32.8304,-29.6364,-29.6364,-29.6364,-14.0635,-27.7766,-27.5292,-15.5761,-15.5761,-15.5761,0,-13.7158,-10.2196,-13.4689,-34.9913,-34.9913,-34.9913,-19.4195,-33.1315,-29.6364,-15.5761,-34.9913,-34.9913,-34.9913,-34.9913,-19.4195,-33.1315,-29.6364,-15.5761,-34.9913,-34.9913,-21.6181,-21.6181,-21.6181,-6.04354,-19.7579,-16.2618,-2.19946,-21.6181,-21.6181,-20.4139 0|0:183:69,1,10,0,1,9,7,4,0,32:69:2442:1,10,0,1,9,7,4,0,32:27,350,0,29,165,239,157,0,1262:-83.1164,-101.759,-300.406,-75.4011,-272.227,-271.345,-103.887,-300.707,-274.355,-302.836,-101.578,-298.398,-272.047,-300.527,-300.226,-91.7535,-288.573,-262.221,-290.702,-288.393,-287.992,-84.486,-281.309,-254.958,-283.438,-281.129,-271.304,-281.331,-90.9706,-287.793,-261.441,-289.922,-287.613,-277.788,-270.524,-288.718,-103.887,-300.707,-274.355,-302.836,-300.527,-290.702,-283.438,-289.922,-302.836,0,-196.853,-170.499,-198.982,-196.673,-186.848,-179.583,-186.067,-198.982,-189.349 0|0:30:11,2,0,0,2,3,0,1,0,2:11:393:2,0,0,2,3,0,1,0,2:44,0,0,44,38,0,32,0,80:-3.29929,-3.25353,-34.7449,-6.61062,-35.3469,-38.7008,-6.61062,-35.3469,-38.7008,-38.7008,-3.25356,-31.9936,-35.347,-35.347,-34.7449,-4.11238,-32.8482,-36.2004,-36.2004,-32.8483,-35.2973,-6.61062,-35.3469,-38.7008,-38.7008,-35.347,-36.2004,-38.7008,-4.02703,-32.767,-36.1209,-36.1209,-32.767,-33.6209,-36.1209,-35.8199,-6.61062,-35.3469,-38.7008,-38.7008,-35.347,-36.2004,-38.7008,-36.1209,-38.7008,0,-28.7474,-32.1017,-32.1017,-28.7474,-29.6015,-32.1017,-29.5213,-32.1017,-31.4996 0|0:73:6,0,0,0,1,7,0,3,7,5:6:207:0,0,0,1,7,0,3,7,5:0,0,0,24,110,0,119,278,201:-21.1019,-22.9081,-39.7347,-22.9081,-39.7347,-39.7347,-22.9081,-39.7347,-39.7347,-39.7347,-21.0488,-37.8756,-37.8756,-37.8756,-37.5745,-15.1219,-31.9491,-31.9491,-31.9491,-30.09,-29.8418,-22.9081,-39.7347,-39.7347,-39.7347,-37.8756,-31.9491,-39.7347,-13.1038,-29.9316,-29.9316,-29.9316,-28.0723,-22.1455,-29.9316,-29.0285,0,-16.8297,-16.8297,-16.8297,-14.9703,-9.04274,-16.8297,-7.02492,-14.7225,-6.32857,-23.1573,-23.1573,-23.1573,-21.298,-15.3708,-23.1573,-13.3531,-0.249366,-21.6522 0|0:49:18,0,0,0,0,0,0,16,8,1:18:627:0,0,0,0,0,0,16,8,1:0,0,0,0,0,0,645,325,40:-47.8155,-53.234,-104.225,-53.234,-104.225,-104.225,-53.234,-104.225,-104.225,-104.225,-53.234,-104.225,-104.225,-104.225,-104.225,-53.234,-104.225,-104.225,-104.225,-104.225,-104.225,-53.234,-104.225,-104.225,-104.225,-104.225,-104.225,-104.225,0,-51.0302,-51.0302,-51.0302,-51.0302,-51.0302,-51.0302,-46.2137,-26.405,-77.4072,-77.4072,-77.4072,-77.4072,-77.4072,-77.4072,-24.1948,-74.999,-49.9369,-100.929,-100.929,-100.929,-100.929,-100.929,-100.929,-47.7324,-74.1104,-100.628 0|0:105:67,0,0,0,0,0,0,22,2,0:67:2374:0,0,0,0,0,0,22,2,0:0,0,0,0,0,0,877,82,0:-52.1733,-72.3423,-265.763,-72.3423,-265.763,-265.763,-72.3423,-265.763,-265.763,-265.763,-72.3423,-265.763,-265.763,-265.763,-265.763,-72.3423,-265.763,-265.763,-265.763,-265.763,-265.763,-72.3423,-265.763,-265.763,-265.763,-265.763,-265.763,-265.763,0,-193.527,-193.527,-193.527,-193.527,-193.527,-193.527,-186.904,-65.5686,-258.994,-258.994,-258.994,-258.994,-258.994,-258.994,-186.757,-258.391,-72.3423,-265.763,-265.763,-265.763,-265.763,-265.763,-265.763,-193.527,-258.994,-265.763 dDocent_Contig_13522 21 . A G 23452.9 . AB=0.316644;ABP=848.688;AC=6;AF=0.5;AN=12;AO=917;CIGAR=1X;DP=2896;DPB=2896;DPRA=0;EPP=1985.57;EPPR=4293.84;GTI=0;LEN=1;MEANALT=1.5;MQM=59.1549;MQMR=59.9772;NS=6;NUMALT=1;ODDS=0;PAIRED=0.207197;PAIREDR=0.331478;PAO=0;PQA=0;PQR=0;PRO=0;QA=35983;QR=77404;RO=1976;RPL=0;RPP=1994.25;RPPR=4293.84;RPR=917;RUN=1;SAF=916;SAP=1985.57;SAR=1;SRF=1976;SRP=4293.84;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:514:402,111:402:15728:111:4297:-227.848,0,-1259.62 0/1:723:561,162:561:21877:162:6433:-358.565,0,-1749 0/1:383:306,76:306:11952:76:3017:-156.137,0,-959.539 0/1:608:451,156:451:17737:156:6091:-364.756,0,-1411.88 0/1:299:86,213:86:3388:213:8413:-666.409,0,-214.967 0/1:369:170,199:170:6722:199:7732:-582.797,0,-493.489 dDocent_Contig_13523 15 . C G 41.6396 . AB=0.115385;ABP=69.8248;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=295;DPB=295;DPRA=0.979866;EPP=24.725;EPPR=619.708;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=396;QR=11226;RO=284;RPL=0;RPP=24.725;RPPR=619.708;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=284;SRP=619.708;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:35,3:35:1395:3:122:0,-0.066647,-114.435 0/0:56:55,1:55:2185:1:41:0,-12.7631,-192.736 0/0:31:31,0:31:1207:0:0:0,-9.33193,-108.904 0/1:52:46,6:46:1799:6:233:-5.68619,0,-146.476 0/0:71:70,0:70:2760:0:0:0,-21.0721,-248.138 0/0:47:47,0:47:1880:0:0:0,-14.1484,-169.402 dDocent_Contig_13524 30 . T C 383.874 . AB=0.213483;ABP=66.471;AC=2;AF=0.25;AN=8;AO=19;CIGAR=1X;DP=190;DPB=190;DPRA=0.881188;EPP=44.2683;EPPR=374.332;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=754;QR=6784;RO=171;RPL=0;RPP=44.2683;RPPR=374.332;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=171;SRP=374.332;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:20,6:20:813:6:238:-13.9642,0,-65.6579 0/1:63:50,13:50:1992:13:516:-27.8212,0,-160.502 0/0:46:46,0:46:1805:0:0:0,-13.8474,-162.673 0/0:55:55,0:55:2174:0:0:0,-16.5566,-195.826 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13526 15 . G A 966.575 . AB=0.223881;ABP=136.118;AC=4;AF=0.333333;AN=12;AO=49;CIGAR=1X;DP=287;DPB=287;DPRA=0;EPP=109.412;EPPR=519.821;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.959184;PAIREDR=0.789916;PAO=0;PQA=0;PQR=0;PRO=0;QA=1971;QR=9583;RO=238;RPL=0;RPP=109.412;RPPR=519.821;RPR=49;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=238;SRP=519.821;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:20,3:20:810:3:117:-3.9856,0,-66.2914 0/1:49:39,10:39:1556:10:401:-21.6979,0,-125.526 0/1:57:35,22:35:1399:22:898:-63.9648,0,-109.003 0/1:72:62,10:62:2511:10:395:-14.2301,0,-204.438 0/0:39:36,3:36:1439:3:120:0,-0.552268,-118.574 0/0:47:46,1:46:1868:1:40:0,-10.1527,-164.321 dDocent_Contig_13527 106 . N A 812.372 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=37;CIGAR=2X;DP=37;DPB=37;DPRA=0;EPP=83.3548;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=30.2516;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=900;QR=0;RO=0;RPL=0;RPP=83.3548;RPPR=0;RPR=37;RUN=1;SAF=0;SAP=83.3548;SAR=37;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:37:0,37:0:0:37:900:-81.2372,-11.1381,0 .:.:.:.:.:.:.:. dDocent_Contig_13528 140 . G A 900.226 . AB=0.380531;ABP=17.0192;AC=2;AF=0.2;AN=10;AO=43;CIGAR=2X;DP=247;DPB=247;DPRA=1.26493;EPP=96.3836;EPPR=445.991;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1408;QR=6740;RO=204;RPL=0;RPP=96.3836;RPPR=445.991;RPR=43;RUN=1;SAF=0;SAP=96.3836;SAR=43;SRF=0;SRP=445.991;SRR=204;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:74:43,31:43:1469:31:1009:-68.8322,0,-110.229 0|0:78:78,0:78:2565:0:0:0,-23.4803,-231.101 0|1:39:27,12:27:911:12:399:-24.4909,0,-70.5582 0|0:55:55,0:55:1760:0:0:0,-16.5566,-158.672 .:.:.:.:.:.:.:. 0|0:1:1,0:1:35:0:0:0,-0.30103,-3.49863 dDocent_Contig_13529 40 . A T 204.34 . AB=0.257143;ABP=20.9405;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=161;DPB=161;DPRA=1.38889;EPP=22.5536;EPPR=333.074;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=0.222222;PAIREDR=0.592105;PAO=0;PQA=0;PQR=0;PRO=0;QA=357;QR=5858;RO=152;RPL=0;RPP=22.5536;RPPR=333.074;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=152;SRP=333.074;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:726:0:0:0,-6.0206,-65.6406 0/0:34:34,0:34:1342:0:0:0,-10.235,-121.047 0/0:10:10,0:10:368:0:0:0,-3.0103,-33.4525 0/1:35:26,9:26:1002:9:357:-21.9569,0,-79.9438 0/0:27:27,0:27:1066:0:0:0,-8.12781,-96.2351 0/0:35:35,0:35:1354:0:0:0,-10.536,-122.125 dDocent_Contig_13530 21 . T G 2861.42 . AB=0.126829;ABP=250.971;AC=1;AF=0.0833333;AN=12;AO=26;CIGAR=12M2I1M1X4M;DP=214;DPB=225.778;DPRA=0;EPP=59.4686;EPPR=83.3548;GTI=0;LEN=1;MEANALT=7.2;MQM=60;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=957;QR=1465;RO=37;RPL=0;RPP=59.4686;RPPR=83.3548;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=37;SRP=83.3548;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:9:4,0,0,0,1,0,1,2,0,1:4:159:0,0,0,1,0,1,2,0,1:0,0,0,40,0,41,80,0,41:-5.38341,-6.58753,-19.6758,-6.58753,-19.6758,-19.6758,-6.58753,-19.6758,-19.6758,-19.6758,-3.29343,-16.3808,-16.3808,-16.3808,-16.0798,-6.58753,-19.6758,-19.6758,-19.6758,-16.3808,-19.6758,-3.20196,-16.2906,-16.2906,-16.2906,-12.9955,-16.2906,-15.9896,0,-13.0859,-13.0859,-13.0859,-9.79109,-13.0859,-9.70044,-12.4839,-6.58753,-19.6758,-19.6758,-19.6758,-16.3808,-19.6758,-16.2906,-13.0859,-19.6758,-3.20196,-16.2906,-16.2906,-16.2906,-12.9955,-16.2906,-12.9051,-9.70044,-16.2906,-15.9896 0|0:38:6,2,2,4,5,6,3,8,0,0:6:234:2,2,4,5,6,3,8,0,0:80,80,154,183,218,112,305,0,0:-23.2133,-18.4279,-37.0613,-18.4279,-31.072,-37.0613,-12.374,-25.018,-25.018,-30.4053,-10.07,-22.7136,-22.7136,-16.66,-27.7997,-7.22425,-19.8677,-19.8677,-13.8142,-11.5104,-24.6528,-15.8509,-28.4948,-28.4948,-22.441,-20.1367,-17.2909,-34.1829,0,-12.6441,-12.6441,-6.59037,-4.28666,-1.44113,-10.0673,-16.8274,-25.0195,-37.6633,-37.6633,-31.6094,-29.3048,-26.4589,-35.086,-19.2356,-44.2545,-25.0195,-37.6633,-37.6633,-31.6094,-29.3048,-26.4589,-35.086,-19.2356,-44.2545,-44.2545 0|0:35:12,4,2,1,0,0,4,10,0,0:12:475:4,2,1,0,0,4,10,0,0:158,75,39,0,0,158,395,0,0:-28.9063,-19.5122,-57.413,-26.3752,-52.4741,-64.8758,-29.312,-55.4108,-62.2717,-68.1136,-32.5186,-58.6171,-65.4779,-68.4146,-71.6208,-32.5186,-58.6171,-65.4779,-68.4146,-71.6208,-71.6208,-19.5135,-45.6141,-52.4753,-55.4121,-58.6183,-58.6183,-57.4142,0,-26.1075,-32.9699,-35.9067,-39.1131,-39.1131,-26.1088,-36.1028,-32.5186,-58.6171,-65.4779,-68.4146,-71.6208,-71.6208,-58.6183,-39.1131,-71.6208,-32.5186,-58.6171,-65.4779,-68.4146,-71.6208,-71.6208,-58.6183,-39.1131,-71.6208,-71.6208 0|0:30:5,1,3,0,3,0,7,5,0,4:5:199:1,3,0,3,0,7,5,0,4:40,101,0,113,0,272,192,0,158:-20.8484,-19.0577,-35.1459,-14.1791,-27.2718,-29.6642,-22.3535,-35.4469,-30.5673,-38.7425,-13.0966,-26.1902,-21.3113,-29.4858,-28.5827,-22.3535,-35.4469,-30.5673,-38.7425,-29.4858,-38.7425,0,-13.0946,-8.21685,-16.3905,-7.13384,-16.3905,-14.2833,-6.59524,-19.6892,-14.8109,-22.9849,-13.7284,-22.9849,-0.632484,-21.4798,-22.3535,-35.4469,-30.5673,-38.7425,-29.4858,-38.7425,-16.3905,-22.9849,-38.7425,-9.35094,-22.4451,-17.5663,-25.7409,-16.4841,-25.7409,-3.38789,-9.98287,-25.7409,-24.5367 0|0:47:9,3,2,0,0,0,0,28,4,0:9:359:3,2,0,0,0,0,28,4,0:106,80,0,0,0,0,1100,151,0:-87.7857,-81.867,-110.534,-83.9038,-104.846,-112.872,-90.495,-111.437,-113.474,-120.065,-90.495,-111.437,-113.474,-120.065,-120.065,-90.495,-111.437,-113.474,-120.065,-120.065,-120.065,-90.495,-111.437,-113.474,-120.065,-120.065,-120.065,-120.065,0,-20.9637,-22.9971,-29.5906,-29.5906,-29.5906,-29.5906,-21.1617,-78.1196,-99.0617,-101.099,-107.69,-107.69,-107.69,-107.69,-17.2133,-106.486,-90.495,-111.437,-113.474,-120.065,-120.065,-120.065,-120.065,-29.5906,-107.69,-120.065 1|0:55:1,1,17,2,0,0,0,26,4,0:1:39:1,17,2,0,0,0,26,4,0:40,621,77,0,0,0,1021,141,0:-131.207,-128.213,-131.118,-80.7866,-80.6971,-78.8752,-125.186,-125.096,-77.6701,-127.79,-131.508,-131.419,-83.9927,-128.392,-134.714,-131.508,-131.419,-83.9927,-128.392,-134.714,-134.714,-131.508,-131.419,-83.9927,-128.392,-134.714,-134.714,-134.714,-47.526,-47.4365,0,-44.4088,-50.7329,-50.7329,-50.7329,-42.9062,-120.034,-119.945,-72.5201,-116.918,-123.24,-123.24,-123.24,-39.2583,-122.036,-131.508,-131.419,-83.9927,-128.392,-134.714,-134.714,-134.714,-50.7329,-123.24,-134.714 dDocent_Contig_13533 56 . T C 2224.11 . AB=0.891304;ABP=64.1892;AC=3;AF=0.25;AN=12;AO=69;CIGAR=1X;DP=207;DPB=207;DPRA=1.11278;EPP=152.842;EPPR=302.673;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.724638;PAIREDR=0.521739;PAO=0;PQA=0;PQR=0;PRO=0;QA=2628;QR=4508;RO=138;RPL=69;RPP=152.842;RPPR=302.673;RPR=0;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=138;SRP=302.673;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:43:43,0:43:1414:0:0:0,-12.9443,-127.533 0/0:38:38,0:38:1153:0:0:0,-11.4391,-104.03 0/0:23:23,0:23:761:0:0:0,-6.92369,-68.783 0/0:29:29,0:29:1012:0:0:0,-8.72987,-91.3811 1/1:28:0,28:0:0:28:1097:-99.0218,-8.42884,0 0/1:46:5,41:5:168:41:1531:-124.184,0,-1.60037 dDocent_Contig_13534 12 . G T 113.643 . AB=0.1875;ABP=30.1537;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=187;DPB=187;DPRA=2.06522;EPP=18.2106;EPPR=393.875;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.857143;PAIREDR=0.933333;PAO=0;PQA=0;PQR=0;PRO=0;QA=283;QR=7187;RO=180;RPL=0;RPP=18.2106;RPPR=393.875;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=180;SRP=393.875;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:47:47,0:47:1875:0:0:0,-14.1484,-168.947 0/0:21:21,0:21:847:0:0:0,-6.32163,-76.5401 0/1:32:26,6:26:1018:6:246:-12.8872,0,-82.2842 0/0:63:62,1:62:2472:1:37:0,-15.2671,-218.924 0/0:6:6,0:6:240:0:0:0,-1.80618,-21.9745 0/0:18:18,0:18:735:0:0:0,-5.41854,-66.4728 dDocent_Contig_13535 56 . T C 7398.79 . AB=0.40678;ABP=25.2771;AC=8;AF=0.666667;AN=12;AO=239;CIGAR=1X;DP=415;DPB=415;DPRA=0;EPP=521.992;EPPR=385.189;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.987448;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9315;QR=6615;RO=176;RPL=239;RPP=521.992;RPPR=385.189;RPR=0;RUN=1;SAF=239;SAP=521.992;SAR=0;SRF=176;SRP=385.189;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:16,9:16:587:9:347:-24.0626,0,-45.6287 0/1:46:25,21:25:934:21:800:-58.4782,0,-70.5121 0/1:80:29,51:29:1104:51:2037:-159.437,0,-75.5681 0/1:144:105,39:105:3951:39:1519:-93.6061,0,-312.308 1/1:26:1,25:1:39:25:985:-85.0445,-3.93022,0 1/1:94:0,94:0:0:94:3627:-326.472,-28.2968,0 dDocent_Contig_13536 40 . T C 187.842 . AB=0.333333;ABP=4.45795;AC=3;AF=0.25;AN=12;AO=11;CIGAR=1X;DP=200;DPB=200;DPRA=1.4;EPP=26.8965;EPPR=413.419;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=436;QR=7528;RO=189;RPL=0;RPP=26.8965;RPPR=413.419;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=189;SRP=413.419;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:35,2:35:1388:2:82:0,-3.35843,-117.399 0/0:50:49,1:49:1945:1:38:0,-11.2542,-171.455 0/0:25:25,0:25:1011:0:0:0,-7.52575,-91.2833 0/0:78:76,2:76:3025:2:82:0,-15.7007,-264.568 1/1:4:0,4:0:0:4:158:-14.5987,-1.20412,0 0/1:6:4,2:4:159:2:76:-5.40736,0,-12.8853 dDocent_Contig_13537 55 . G C 225.768 . AB=0.102941;ABP=96.1281;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=7M1X;DP=457;DPB=443.5;DPRA=0.974684;EPP=33.4109;EPPR=923.715;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.642857;PAIREDR=0.693396;PAO=0;PQA=0;PQR=0;PRO=0;QA=573;QR=16623;RO=424;RPL=14;RPP=33.4109;RPPR=923.715;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=424;SRP=923.715;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:52:47,0,4:47:1843:0,4:0,163:0,-14.1484,-165.727,-0.543495,-152.279,-151.075 0|0:107:105,0,2:105:4122:0,2:0,82:0,-31.6081,-370.595,-24.4305,-363.827,-363.225 0|1:68:59,2,7:59:2321:2,7:80,287:-5.93549,-17.1085,-207.405,0,-184.317,-188.8 0|0:81:80,0,1:80:3119:0,1:0,41:0,-24.0824,-280.407,-20.2889,-277.022,-276.721 0|0:70:58,12,0:58:2263:12,0:451,0:-19.8629,0,-182.787,-37.3227,-186.399,-223.344 0|0:79:75,4,0:75:2955:4,0:139,0:0,-10.9299,-253.227,-22.5772,-254.431,-265.728 dDocent_Contig_13538 23 . G A 197.427 . AB=0.5;ABP=3.0103;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=185;DPB=185;DPRA=0.409357;EPP=18.2106;EPPR=389.532;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=58.1854;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.955056;PAO=0;PQA=0;PQR=0;PRO=0;QA=279;QR=7022;RO=178;RPL=0;RPP=18.2106;RPPR=389.532;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=178;SRP=389.532;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:900:0:0:0,-6.92369,-81.3091 0/0:34:34,0:34:1330:0:0:0,-10.235,-119.963 0/1:14:7,7:7:276:7:279:-21.2656,0,-17.2477 0/0:58:58,0:58:2329:0:0:0,-17.4597,-198.325 0/0:30:30,0:30:1160:0:0:0,-9.0309,-104.679 0/0:26:26,0:26:1027:0:0:0,-7.82678,-92.7245 dDocent_Contig_13539 22 . G T 286.163 . AB=0.47619;ABP=3.1137;AC=1;AF=0.1;AN=10;AO=10;CIGAR=1X;DP=87;DPB=87;DPRA=1.27273;EPP=24.725;EPPR=170.214;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8831;NS=5;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.935065;PAO=0;PQA=0;PQR=0;PRO=0;QA=402;QR=3041;RO=77;RPL=0;RPP=24.725;RPPR=170.214;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=77;SRP=170.214;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:1:1,0:1:41:0:0:0,-0.30103,-4.09457 0/0:14:14,0:14:560:0:0:0,-4.21442,-50.7427 0/1:21:11,10:11:436:10:402:-30.2179,0,-33.2712 0/0:17:17,0:17:679:0:0:0,-5.11751,-61.4385 ./.:.:.:.:.:.:.:. 0/0:34:34,0:34:1325:0:0:0,-10.235,-119.484 dDocent_Contig_13541 127 . A G 228.33 . AB=0.222222;ABP=45.2334;AC=5;AF=0.416667;AN=12;AO=14;CIGAR=1X;DP=73;DPB=73;DPRA=1.26;EPP=33.4109;EPPR=131.127;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.714286;PAIREDR=0.661017;PAO=0;PQA=0;PQR=0;PRO=0;QA=539;QR=2237;RO=59;RPL=14;RPP=33.4109;RPPR=131.127;RPR=0;RUN=1;SAF=0;SAP=33.4109;SAR=14;SRF=0;SRP=131.127;SRR=59;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:10,2:10:387:2:78:-3.79111,0,-31.5752 0/1:19:13,6:13:490:6:231:-15.4383,0,-38.7237 0/0:10:10,0:10:377:0:0:0,-3.0103,-34.2813 0/1:10:8,2:8:299:2:78:-4.39317,0,-24.2555 0/1:19:17,2:17:645:2:75:-1.40077,0,-52.6672 0/1:3:1,2:1:39:2:77:-6.40605,0,-2.99347 dDocent_Contig_13542 33 . G T 275.439 . AB=0.205882;ABP=54.1038;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=230;DPB=230;DPRA=0.584906;EPP=39.9253;EPPR=465.534;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.764706;PAIREDR=0.769953;PAO=0;PQA=0;PQR=0;PRO=0;QA=681;QR=8443;RO=213;RPL=0;RPP=39.9253;RPPR=465.534;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=213;SRP=465.534;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:28,5:28:1106:5:203:-8.71907,0,-89.8904 0/0:43:43,0:43:1696:0:0:0,-12.9443,-152.872 0/0:23:22,1:22:875:1:39:0,-3.02713,-75.1622 0/1:35:26,9:26:1049:9:358:-22.0467,0,-84.1629 0/0:33:31,2:31:1250:2:81:0,-2.24826,-105.083 0/0:63:63,0:63:2467:0:0:0,-18.9649,-222.177 dDocent_Contig_13544 12 . G T 40.2211 . AB=0.109756;ABP=111.478;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X3M1X;DP=311;DPB=311;DPRA=0.439815;EPP=24.725;EPPR=639.252;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=58.4061;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.945392;PAO=0;PQA=0;PQR=0;PRO=0;QA=383;QR=10722;RO=293;RPL=0;RPP=24.725;RPPR=639.252;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=293;SRP=639.252;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:69:67,0:67:2470:0:0:0,-20.169,-221.399 0|0:74:72,0:72:2636:0:0:0,-21.6742,-236.219 0|1:57:51,6:51:1855:6:227:-3.63498,0,-148.937 0|0:73:71,0:71:2605:0:0:0,-21.3731,-231.501 0|0:13:11,1:11:390:1:38:0,-0.11993,-27.6689 0|1:25:21,3:21:766:3:118:-3.60493,0,-61.3711 dDocent_Contig_13545 20 . A C 383.252 . AB=0.162651;ABP=167.1;AC=6;AF=0.5;AN=12;AO=27;CIGAR=1X;DP=166;DPB=166;DPRA=0;EPP=61.6401;EPPR=304.845;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.888889;PAIREDR=0.755396;PAO=0;PQA=0;PQR=0;PRO=0;QA=1080;QR=5517;RO=139;RPL=0;RPP=61.6401;RPPR=304.845;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=139;SRP=304.845;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:20,3:20:808:3:119:-4.1717,0,-66.1134 0/1:39:31,8:31:1240:8:314:-16.881,0,-100.13 0/1:14:11,3:11:430:3:119:-6.88059,0,-34.8332 0/1:30:27,3:27:1075:3:123:-2.43389,0,-88.0073 0/1:27:23,4:23:902:4:163:-6.93062,0,-73.3613 0/1:33:27,6:27:1062:6:242:-12.223,0,-85.9382 dDocent_Contig_13547 8 . C A 167.756 . AB=0.185185;ABP=49.4959;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=327;DPB=327;DPRA=0.989011;EPP=24.725;EPPR=557.258;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.848101;PAO=0;PQA=0;PQR=0;PRO=0;QA=380;QR=12079;RO=316;RPL=0;RPP=24.725;RPPR=689.196;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=300;SRP=557.258;SRR=16;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:56:56,0:56:2168:0:0:0,-16.8577,-195.341 0/0:119:119,0:119:4579:0:0:0,-35.8226,-412.157 0/1:54:44,10:44:1670:10:380:-18.2984,0,-134.309 0/0:82:81,0:81:3084:0:0:0,-24.3834,-277.333 0/0:11:11,0:11:383:0:0:0,-3.31133,-34.8029 0/0:5:5,0:5:195:0:0:0,-1.50515,-17.9242 dDocent_Contig_13548 13 . C A 98.17 . AB=0.25;ABP=13.8677;AC=2;AF=0.166667;AN=12;AO=5;CIGAR=2X;DP=176;DPB=176;DPRA=0.25641;EPP=13.8677;EPPR=374.332;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=0;PAIREDR=0.80117;PAO=0;PQA=0;PQR=0;PRO=0;QA=203;QR=6834;RO=171;RPL=0;RPP=13.8677;RPPR=374.332;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=171;SRP=374.332;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:13:13,0:13:519:0:0:0,-3.91339,-47.0527 0|0:90:90,0:90:3575:0:0:0,-27.0927,-321.783 0|0:21:21,0:21:838:0:0:0,-6.32163,-75.7339 0|0:32:32,0:32:1296:0:0:0,-9.63296,-116.903 0|1:13:11,2:11:444:2:81:-3.77234,0,-36.403 0|1:7:4,3:4:162:3:122:-9.26528,0,-12.8597 dDocent_Contig_13549 41 . A G 639.128 . AB=0.219355;ABP=109.048;AC=5;AF=0.416667;AN=12;AO=35;CIGAR=1X;DP=192;DPB=192;DPRA=0;EPP=79.0118;EPPR=343.931;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.571429;PAIREDR=0.605096;PAO=0;PQA=0;PQR=0;PRO=0;QA=1351;QR=6206;RO=157;RPL=0;RPP=79.0118;RPPR=343.931;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=157;SRP=343.931;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:14,6:14:550:6:222:-14.3104,0,-43.8196 0/1:35:29,6:29:1152:6:221:-9.70504,0,-93.4243 0/1:18:9,9:9:360:9:359:-27.2535,0,-27.3444 0/1:39:32,7:32:1259:7:271:-13.0159,0,-101.843 0/1:43:37,6:37:1453:6:238:-8.84986,0,-118.08 0/0:37:36,1:36:1432:1:40:0,-7.14243,-125.143 dDocent_Contig_13550 10 . A G 37.5827 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=9;CIGAR=2X;DP=396;DPB=396;DPRA=0.719298;EPP=22.5536;EPPR=806.455;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=59.9027;NS=6;NUMALT=2;ODDS=0;PAIRED=0.111111;PAIREDR=0.524324;PAO=0;PQA=0;PQR=0;PRO=0;QA=367;QR=14654;RO=370;RPL=0;RPP=22.5536;RPPR=806.455;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=370;SRP=806.455;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:52:47,4,1:47:1843:4,1:162,18:0,-0.610474,-151.163,-12.8744,-151.052,-164.11 0|0:72:70,0,2:70:2819:0,2:0,81:0,-21.0721,-253.408,-13.9884,-246.729,-246.127 0|0:59:56,3,0:56:2215:3,0:123,0:0,-6.29598,-188.062,-16.8577,-188.965,-199.118 0|0:53:51,2,0:51:2016:2,0:82,0:0,-8.17491,-173.863,-15.3525,-174.465,-181.234 0|0:80:71,0,8:71:2778:0,8:0,321:-5.2809,-26.654,-255.029,0,-228.579,-226.171 0|0:80:75,0,5:75:2983:0,5:0,204:0,-22.5772,-268.091,-5.33837,-251.259,-249.754 dDocent_Contig_13551 11 . C T 112.188 . AB=0.5;ABP=3.0103;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=96;DPB=96;DPRA=0.454545;EPP=11.6962;EPPR=202.786;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=8.67362e-19;PAIRED=0;PAIREDR=0.456522;PAO=0;PQA=0;PQR=0;PRO=0;QA=164;QR=3635;RO=92;RPL=0;RPP=11.6962;RPPR=202.786;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=92;SRP=202.786;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:13:13,0:13:491:0:0:0,-3.91339,-44.5223 0/0:16:16,0:16:632:0:0:0,-4.81648,-57.2118 0/1:8:4,4:4:160:4:164:-12.7417,0,-12.3752 0/0:26:26,0:26:1015:0:0:0,-7.82678,-91.6358 0/0:14:14,0:14:570:0:0:0,-4.21442,-51.642 0/0:19:19,0:19:767:0:0:0,-5.71957,-69.3513 dDocent_Contig_13552 10 . A C 4964.97 . AB=0.586667;ABP=12.7964;AC=8;AF=0.666667;AN=12;AO=157;CIGAR=1X;DP=219;DPB=219;DPRA=0;EPP=343.931;EPPR=137.642;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.33758;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6079;QR=2506;RO=62;RPL=0;RPP=343.931;RPPR=137.642;RPR=157;RUN=1;SAF=157;SAP=343.931;SAR=0;SRF=62;SRP=137.642;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:15:0,15:0:0:15:571:-51.7224,-4.51545,0 0/1:42:24,18:24:968:18:696:-50.3139,0,-74.7767 0/1:19:7,12:7:283:12:466:-36.5672,0,-20.1234 0/1:42:12,30:12:483:30:1188:-94.5549,0,-31.1778 1/1:54:0,54:0:0:54:2072:-186.681,-16.2556,0 0/1:47:19,28:19:772:28:1086:-83.8789,0,-55.6509 dDocent_Contig_13553 10 . A T 54.1456 . AB=0.173913;ABP=24.253;AC=2;AF=0.166667;AN=12;AO=5;CIGAR=1X;DP=119;DPB=119;DPRA=0.652778;EPP=13.8677;EPPR=250.558;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.95614;PAO=0;PQA=0;PQR=0;PRO=0;QA=202;QR=4535;RO=114;RPL=0;RPP=13.8677;RPPR=250.558;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=114;SRP=250.558;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:23,1:23:916:1:38:0,-3.42745,-78.9498 0/1:11:9,2:9:356:2:82:-4.46835,0,-29.0853 0/1:12:10,2:10:404:2:82:-4.16732,0,-33.1081 0/0:19:19,0:19:743:0:0:0,-5.71957,-67.193 0/0:22:22,0:22:882:0:0:0,-6.62266,-79.6888 0/0:31:31,0:31:1234:0:0:0,-9.33193,-111.334 dDocent_Contig_13554 26 . A T 43.1307 . AB=0.113924;ABP=105.289;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=178;DPB=178;DPRA=2.23636;EPP=29.068;EPPR=363.475;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.73494;PAO=0;PQA=0;PQR=0;PRO=0;QA=453;QR=6584;RO=166;RPL=0;RPP=29.068;RPPR=363.475;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=166;SRP=363.475;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1094:0:0:0,-8.42884,-98.7466 0/1:57:51,6:51:2042:6:234:-4.27004,0,-166.811 0/0:44:41,3:41:1636:3:113:0,-2.7084,-136.935 0/1:22:19,3:19:754:3:106:-3.26043,0,-61.5604 0/0:3:3,0:3:122:0:0:0,-0.90309,-11.3725 0/0:24:24,0:24:936:0:0:0,-7.22472,-84.5402 dDocent_Contig_13555 106 . N T 972.432 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=31;CIGAR=2X;DP=31;DPB=31;DPRA=0;EPP=70.3259;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1059;QR=0;RO=0;RPL=0;RPP=70.3259;RPPR=0;RPR=31;RUN=1;SAF=0;SAP=70.3259;SAR=31;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:5:0,5:0:0:5:173:-15.9102,-1.50515,0 1|1:7:0,7:0:0:7:233:-21.2962,-2.10721,0 1|1:8:0,8:0:0:8:272:-24.811,-2.40824,0 .:.:.:.:.:.:.:. 1|1:11:0,11:0:0:11:381:-34.6237,-3.31133,0 dDocent_Contig_13557 61 . A T 31.1062 . AB=0.25;ABP=7.35324;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=1X;DP=167;DPB=167;DPRA=0.251572;EPP=7.35324;EPPR=361.303;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.593939;PAO=0;PQA=0;PQR=0;PRO=0;QA=71;QR=6262;RO=165;RPL=1;RPP=3.0103;RPPR=15.6575;RPR=1;RUN=1;SAF=1;SAP=3.0103;SAR=1;SRF=98;SRP=15.6575;SRR=67;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:8:6,2:6:235:2:71:-4.33214,0,-19.1114 0/0:32:32,0:32:1218:0:0:0,-9.63296,-109.906 0/0:37:37,0:37:1404:0:0:0,-11.1381,-126.633 0/0:30:30,0:30:1146:0:0:0,-9.0309,-103.431 0/0:28:28,0:28:1045:0:0:0,-8.42884,-94.3512 0/0:32:32,0:32:1214:0:0:0,-9.63296,-109.53 dDocent_Contig_13558 7 . A G 36.8649 . AB=0.125;ABP=61.6401;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=1X;DP=152;DPB=152;DPRA=0.767442;EPP=18.2106;EPPR=237.005;GTI=0;LEN=1;MEANALT=1;MQM=53.7143;MQMR=49.8345;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.857143;PAIREDR=0.531034;PAO=0;PQA=0;PQR=0;PRO=0;QA=252;QR=5494;RO=145;RPL=0;RPP=18.2106;RPPR=317.874;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=135;SRP=237.005;SRR=10;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:448:0:0:0,-3.61236,-38.922 0/0:39:39,0:39:1486:0:0:0,-11.7402,-112.268 0/0:18:17,1:17:636:1:38:0,-3.8212,-43.208 0/1:22:20,2:20:765:2:73:-0.308444,0,-54.3743 0/0:35:35,0:35:1335:0:0:0,-10.536,-112.49 0/1:26:22,4:22:824:4:141:-5.20781,0,-51.3703 dDocent_Contig_13559 7 . A G 123.505 . AB=0.208333;ABP=38.4777;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=373;DPB=373;DPRA=0.801932;EPP=33.4109;EPPR=780.397;GTI=0;LEN=1;MEANALT=1.33333;MQM=51;MQMR=54.2933;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.522346;PAO=0;PQA=0;PQR=0;PRO=0;QA=433;QR=13725;RO=358;RPL=0;RPP=33.4109;RPPR=780.397;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=358;SRP=780.397;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:48:37,10:37:1390:10:307:-13.5723,0,-107.84 0/0:41:38,3:38:1466:3:87:0,-4.25222,-122.031 0/0:77:76,1:76:2906:1:39:0,-19.3059,-251.869 0/0:45:45,0:45:1728:0:0:0,-13.5463,-152.553 0/0:69:69,0:69:2655:0:0:0,-20.7711,-235.035 0/0:93:93,0:93:3580:0:0:0,-27.9958,-319.58 dDocent_Contig_13560 66 . A G 220.429 . AB=0.263158;ABP=21.525;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=186;DPB=186;DPRA=1.28378;EPP=24.725;EPPR=359.576;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.375;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.579545;PAO=0;PQA=0;PQR=0;PRO=0;QA=385;QR=6470;RO=176;RPL=5;RPP=3.0103;RPPR=3.05965;RPR=5;RUN=1;SAF=5;SAP=3.0103;SAR=5;SRF=90;SRP=3.20771;SRR=86;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:38,0:38:1381:0:0:0,-11.4391,-124.573 0/1:38:28,10:28:994:10:385:-23.5657,0,-78.316 0/0:24:24,0:24:888:0:0:0,-7.22472,-80.2269 0/0:34:34,0:34:1276:0:0:0,-10.235,-115.124 0/0:18:18,0:18:642:0:0:0,-5.41854,-58.0877 0/0:34:34,0:34:1289:0:0:0,-10.235,-110.785 dDocent_Contig_13561 12 . C T 12815.6 . AB=0;ABP=0;AC=4;AF=0.333333;AN=12;AO=358;CIGAR=1X;DP=475;DPB=475;DPRA=4.10753;EPP=780.397;EPPR=257.073;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=14358;QR=4687;RO=117;RPL=0;RPP=780.397;RPPR=257.073;RPR=358;RUN=1;SAF=358;SAP=780.397;SAR=0;SRF=117;SRP=257.073;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1140:0:0:0,-8.42884,-102.877 0/0:39:39,0:39:1570:0:0:0,-11.7402,-141.537 0/0:23:22,1:22:872:1:37:0,-3.22586,-75.0869 0/0:26:26,0:26:1027:0:0:0,-7.82678,-92.7211 1/1:198:0,198:0:0:198:7946:-714.701,-59.6039,0 1/1:161:2,159:2:78:159:6375:-566.079,-41.0631,0 dDocent_Contig_13562 73 . G A 196.783 . AB=0.333333;ABP=9.52472;AC=1;AF=0.125;AN=8;AO=10;CIGAR=1X;DP=90;DPB=90;DPRA=4;EPP=24.725;EPPR=176.728;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=0.9;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=360;QR=2821;RO=80;RPL=10;RPP=24.725;RPPR=176.728;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=80;SRP=176.728;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:45:44,1:44:1541:1:36:0,-9.94807,-135.383 0/0:10:10,0:10:354:0:0:0,-3.0103,-32.2 0/1:27:18,9:18:635:9:324:-21.3773,0,-49.3492 0/0:8:8,0:8:291:0:0:0,-2.40824,-26.5398 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13563 22 . A T 55.6109 . AB=0.138889;ABP=43.7857;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=206;DPB=206;DPRA=1.06;EPP=20.3821;EPPR=432.962;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.875;PAIREDR=0.762626;PAO=0;PQA=0;PQR=0;PRO=0;QA=305;QR=7927;RO=198;RPL=0;RPP=20.3821;RPPR=432.962;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=198;SRP=432.962;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:639:0:0:0,-4.81648,-57.8449 0/0:40:38,2:38:1512:2:70:0,-5.39669,-129.672 0/1:36:31,5:31:1237:5:195:-7.08397,0,-100.764 0/0:30:29,1:29:1158:1:40:0,-5.03522,-100.498 0/0:38:38,0:38:1512:0:0:0,-11.4391,-136.325 0/0:46:46,0:46:1869:0:0:0,-13.8474,-168.407 dDocent_Contig_13564 82 . T C 666.054 . AB=0.0948905;ABP=198.3;AC=4;AF=0.333334;AN=12;AO=15;CIGAR=1X2M;DP=195;DPB=218;DPRA=1.36;EPP=35.5824;EPPR=322.217;GTI=0;LEN=1;MEANALT=1.8;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.133333;PAIREDR=0.972789;PAO=34.5;PQA=1169.5;PQR=0;PRO=0;QA=530;QR=5136;RO=147;RPL=15;RPP=35.5824;RPPR=322.217;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=147;SRP=322.217;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:17:12,2,3:12:413:2,3:70,106:-4.78779,-2.8103,-35.5364,0,-27.5168,-32.3007 0|1:45:35,8,2:35:1206:8,2:275,70:-11.6236,0,-95.3513,-16.4735,-92.0645,-113.793 0|0:25:25,0,0:25:886:0,0:0,0:0,-7.52575,-79.3664,-7.52575,-79.3664,-79.3664 0|1:43:17,22,4:17:600:22,4:736,138:-54.2145,0,-41.9999,-48.1278,-37.4265,-95.7675 0|0:33:31,0,2:31:1082:0,2:0,72:0,-9.33193,-97.1044,-3.33681,-91.2298,-90.6277 0|1:32:27,1,4:27:949:1,4:35,144:-3.19657,-8.50571,-85.326,0,-73.8789,-75.5217 dDocent_Contig_13565 22 . T G 294.131 . AB=0.138122;ABP=208.892;AC=3;AF=0.25;AN=12;AO=30;CIGAR=1X;DP=357;DPB=357;DPRA=1.228;EPP=68.1545;EPPR=713.082;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.406728;PAO=0;PQA=0;PQR=0;PRO=0;QA=1178;QR=10690;RO=327;RPL=0;RPP=68.1545;RPPR=713.082;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=327;SRP=713.082;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:37,4:37:1177:4:162:-2.62473,0,-93.8694 0/1:70:60,10:60:1937:10:396:-14.9239,0,-153.517 0/1:70:59,11:59:1975:11:420:-17.0695,0,-156.938 0/0:70:66,4:66:2157:4:159:0,-6.37977,-179.69 0/0:56:55,1:55:1785:1:41:0,-12.7631,-156.807 0/0:50:50,0:50:1659:0:0:0,-15.0515,-149.582 dDocent_Contig_13567 19 . G A 121.974 . AB=0.230769;ABP=19.3799;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=169;DPB=169;DPRA=1.12963;EPP=20.3821;EPPR=352.617;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0.962733;PAO=0;PQA=0;PQR=0;PRO=0;QA=297;QR=6395;RO=161;RPL=0;RPP=20.3821;RPPR=352.617;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=161;SRP=352.617;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:20,6:20:792:6:232:-13.4192,0,-63.7723 0/0:28:28,0:28:1128:0:0:0,-8.42884,-101.8 0/0:35:33,2:33:1331:2:65:0,-4.36528,-113.877 0/0:16:16,0:16:619:0:0:0,-4.81648,-56.0349 0/0:38:38,0:38:1518:0:0:0,-11.4391,-136.863 0/0:26:26,0:26:1007:0:0:0,-7.82678,-90.9147 dDocent_Contig_13568 16 . T G 359.489 . AB=0.151899;ABP=169.307;AC=4;AF=0.333333;AN=12;AO=33;CIGAR=1X;DP=274;DPB=274;DPRA=0;EPP=74.6689;EPPR=526.335;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.909091;PAIREDR=0.622407;PAO=0;PQA=0;PQR=0;PRO=0;QA=1321;QR=9736;RO=241;RPL=0;RPP=74.6689;RPPR=526.335;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=241;SRP=526.335;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:72:66,6:66:2656:6:228:0,-0.79814,-218.28 0/1:50:44,6:44:1781:6:246:-7.46862,0,-145.446 0/1:49:37,12:37:1490:12:485:-29.2505,0,-119.592 0/1:23:20,3:20:817:3:122:-4.4488,0,-66.9195 0/1:36:33,3:33:1342:3:122:-0.535413,0,-110.198 0/0:44:41,3:41:1650:3:118:0,-2.24374,-137.72 dDocent_Contig_13569 12 . T C 620.599 . AB=0.606061;ABP=6.23461;AC=1;AF=0.0833333;AN=12;AO=21;CIGAR=1X;DP=122;DPB=122;DPRA=1.34247;EPP=48.6112;EPPR=181.05;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.594059;PAO=0;PQA=0;PQR=0;PRO=0;QA=850;QR=4046;RO=101;RPL=0;RPP=48.6112;RPPR=222.329;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=96;SRP=181.05;SRR=5;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:13,20:13:518:20:810:-63.2816,0,-37.0302 0/0:16:16,0:16:654:0:0:0,-4.81648,-59.192 0/0:20:20,0:20:800:0:0:0,-6.0206,-72.3184 0/0:16:15,1:15:597:1:40:0,-0.820801,-50.0716 0/0:12:12,0:12:483:0:0:0,-3.61236,-43.8207 0/0:25:25,0:25:994:0:0:0,-7.52575,-89.7585 dDocent_Contig_13570 69 . G A 79.2362 . AB=0.125;ABP=100.727;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=163;DPB=163;DPRA=1.92771;EPP=24.725;EPPR=335.246;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.7;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=371;QR=5687;RO=153;RPL=10;RPP=24.725;RPPR=335.246;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=153;SRP=335.246;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:613:0:0:0,-4.81648,-55.5076 0/0:21:21,0:21:775:0:0:0,-6.32163,-70.0681 0/1:61:53,8:53:2003:8:305:-9.44395,0,-162.146 0/1:19:17,2:17:608:2:66:-0.548609,0,-49.318 0/0:18:18,0:18:679:0:0:0,-5.41854,-61.4359 0/0:28:28,0:28:1009:0:0:0,-8.42884,-91.1034 dDocent_Contig_13571 71 . T C 283.618 . AB=0.27907;ABP=21.2406;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=172;DPB=172;DPRA=1.66667;EPP=29.068;EPPR=350.446;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=472;QR=6392;RO=160;RPL=12;RPP=29.068;RPPR=350.446;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=160;SRP=350.446;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:13:13,0:13:493:0:0:0,-3.91339,-44.6985 0/0:32:32,0:32:1294:0:0:0,-9.63296,-116.723 0/0:19:19,0:19:761:0:0:0,-5.71957,-68.8107 0/0:14:14,0:14:550:0:0:0,-4.21442,-49.8415 0/0:51:51,0:51:2048:0:0:0,-15.3525,-184.506 0/1:43:31,12:31:1246:12:472:-29.8846,0,-99.467 dDocent_Contig_13572 13 . T A 2273.73 . AB=0.476471;ABP=3.8278;AC=6;AF=0.5;AN=12;AO=81;CIGAR=1M1X9M;DP=170;DPB=169.091;DPRA=0;EPP=178.9;EPPR=170.214;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.666667;PAIREDR=0.792208;PAO=0;PQA=0;PQR=0;PRO=0;QA=3080;QR=3019;RO=77;RPL=0;RPP=178.9;RPPR=170.214;RPR=81;RUN=1;SAF=81;SAP=178.9;SAR=0;SRF=77;SRP=170.214;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:36:12,0,3,21:12:470:0,3,21:0,102,810:-62.9407,-66.5531,-105.205,-58.2875,-96.9377,-96.0346,0,-38.6892,-30.4283,-32.3676 0|1:28:14,0,1,13:14:556:0,1,13:0,38,491:-36.0179,-40.2323,-86.0154,-37.1156,-82.8992,-82.5981,0,-45.7893,-42.674,-41.876 0|1:18:3,0,6,9:3:120:0,6,9:0,224,350:-36.2931,-37.1962,-47.0843,-18.8618,-28.7498,-26.9436,-8.4289,-18.323,0,-15.6137 0|1:36:20,2,0,14:20:780:2,0,14:80,0,506:-35.2299,-34.6556,-98.1841,-41.2505,-98.7862,-105.378,0,-57.5138,-64.1048,-59.8904 0|1:17:10,0,0,7:10:396:0,0,7:0,0,273:-19.8185,-22.8288,-55.4261,-22.8288,-55.4261,-55.4261,0,-32.9894,-32.9894,-30.8822 0|1:35:18,0,0,17:18:697:0,0,17:0,0,650:-48.2944,-53.713,-110.97,-53.713,-110.97,-110.97,0,-57.6415,-57.6415,-52.5239 dDocent_Contig_13573 20 . T C 3838.96 . AB=0.563877;ABP=11.0553;AC=8;AF=0.666667;AN=12;AO=128;CIGAR=1X2M;DP=227;DPB=227;DPRA=0;EPP=280.959;EPPR=211.472;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.640625;PAIREDR=0.604167;PAO=0;PQA=0;PQR=0;PRO=0;QA=5045;QR=3703;RO=96;RPL=0;RPP=280.959;RPPR=211.472;RPR=128;RUN=1;SAF=128;SAP=280.959;SAR=0;SRF=96;SRP=211.472;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:47:9,0,38:9:357:0,38:0,1456:-117.133,-119.842,-149.233,0,-29.7842,-18.345 0|1:52:30,0,22:30:1154:0,22:0,882:-64.0356,-73.0665,-167.795,0,-95.122,-88.4993 0|1:70:37,0,33:37:1428:0,33:0,1307:-96.8228,-107.961,-225.221,0,-117.651,-107.717 0|1:49:19,0,30:19:725:0,30:0,1201:-93.6172,-99.3368,-158.8,0,-59.8512,-50.8203 1|1:5:1,1,3:1:39:1,3:41,122:-9.95774,-6.87387,-9.77459,-0.198003,0,-2.49089 1|1:4:0,2,2:0:0:2,2:82,77:-13.4873,-6.70677,-6.10471,-7.17762,0,-6.57556 dDocent_Contig_13574 38 . T A 769.892 . AB=0.5;ABP=3.0103;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1M1X7M1X1M1X;DP=141;DPB=132.75;DPRA=1.52941;EPP=31.2394;EPPR=228.843;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=511;QR=4019;RO=104;RPL=0;RPP=31.2394;RPPR=228.843;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=104;SRP=228.843;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:29:25,0,4,0:25:970:0,4,0:0,158,0:-5.87061,-13.3964,-93.0836,0,-80.0809,-78.8767,-13.3964,-93.0836,-80.0809,-93.0836 0|0:12:9,0,3,0:9:345:0,3,0:0,118,0:-7.38922,-10.0985,-38.4013,0,-28.6932,-27.7901,-10.0985,-38.4013,-28.6932,-38.4013 0|0:40:35,0,4,0:35:1350:0,4,0:0,163,0:-2.91721,-13.4533,-124.288,0,-110.839,-109.635,-13.4533,-124.288,-110.839,-124.288 0|0:30:29,0,0,0:29:1119:0,0,0:0,0,0:0,-8.72987,-100.621,-8.72987,-100.621,-100.621,-8.72987,-100.621,-100.621,-100.621 0|0:4:4,0,0,0:4:156:0,0,0:0,0,0:0,-1.20412,-14.4168,-1.20412,-14.4168,-14.4168,-1.20412,-14.4168,-14.4168,-14.4168 1|0:26:2,13,0,11:2:79:13,0,11:511,0,405:-68.0252,-26.5821,-29.1737,-68.6273,-33.0871,-75.1292,-35.5289,0,-42.0301,-38.7188 dDocent_Contig_13575 29 . A C 126.53 . AB=0;ABP=0;AC=4;AF=0.333333;AN=12;AO=3;CIGAR=1X;DP=40;DPB=40;DPRA=0.162162;EPP=9.52472;EPPR=83.3548;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.945946;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=1434;RO=37;RPL=0;RPP=9.52472;RPPR=83.3548;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=37;SRP=83.3548;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:11:11,0:11:425:0:0:0,-3.31133,-38.5995 0/0:10:10,0:10:376:0:0:0,-3.0103,-34.1831 0/0:8:8,0:8:316:0:0:0,-2.40824,-28.8048 0/0:8:8,0:8:317:0:0:0,-2.40824,-28.8964 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 dDocent_Contig_13577 11 . T C 203.837 . AB=0.148148;ABP=90.1105;AC=7;AF=0.583333;AN=12;AO=12;CIGAR=1X2M;DP=112;DPB=112;DPRA=1.30645;EPP=5.9056;EPPR=213.643;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.0833333;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=438;QR=3846;RO=97;RPL=0;RPP=29.068;RPPR=213.643;RPR=12;RUN=1;SAF=4;SAP=5.9056;SAR=8;SRF=97;SRP=213.643;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:27:24,0,3:24:929:0,3:0,108:-1.94708,-9.1718,-85.4981,0,-76.6892,-75.7861 0|1:34:30,0,4:30:1191:0,4:0,145:-3.16891,-12.1998,-110.274,0,-98.4405,-97.2364 0|1:17:13,0,4:13:521:0,4:0,150:-8.74537,-12.6588,-55.6024,0,-43.3244,-42.1203 0|0:30:30,0,0:30:1205:0,0:0,0:0,-9.0309,-108.727,-9.0309,-108.727,-108.727 1|1:1:0,1,0:0:0:1,0:37,0:-3.69783,-0.30103,0,-3.69783,-0.30103,-3.69783 1|1:3:0,2,1:0:0:2,1:81,35:-9.91319,-3.1976,-2.59554,-7.08367,0,-6.78264 dDocent_Contig_13578 29 . G T 91.0428 . AB=0.157895;ABP=41.6397;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=276;DPB=276;DPRA=0.798319;EPP=16.0391;EPPR=584.965;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.544776;PAO=0;PQA=0;PQR=0;PRO=0;QA=241;QR=10577;RO=268;RPL=0;RPP=16.0391;RPPR=584.965;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=268;SRP=584.965;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:52:51,0:51:2010:0:0:0,-15.3525,-180.689 0/0:54:54,0:54:2122:0:0:0,-16.2556,-191.169 0/0:54:54,0:54:2161:0:0:0,-16.2556,-194.664 0/0:40:39,0:39:1568:0:0:0,-11.7402,-140.958 0/0:38:38,0:38:1452:0:0:0,-11.4391,-130.928 0/1:38:32,6:32:1264:6:241:-10.6272,0,-102.594 dDocent_Contig_13579 11 . T C 222.543 . AB=0.25641;ABP=23.1103;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=76;DPB=76;DPRA=2.10811;EPP=24.725;EPPR=146.327;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.787879;PAO=0;PQA=0;PQR=0;PRO=0;QA=405;QR=2663;RO=66;RPL=0;RPP=24.725;RPPR=146.327;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=66;SRP=146.327;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:566:0:0:0,-4.21442,-51.2822 0/0:8:8,0:8:325:0:0:0,-2.40824,-29.6191 0/0:3:3,0:3:121:0:0:0,-0.90309,-11.2802 0/0:12:12,0:12:486:0:0:0,-3.61236,-44.0914 0/1:16:10,6:10:402:6:241:-17.2498,0,-31.7229 0/1:23:19,4:19:763:4:164:-8.22621,0,-62.0651 dDocent_Contig_13580 26 . T C 8601.58 . AB=0.30663;ABP=355.725;AC=5;AF=0.416667;AN=12;AO=341;CIGAR=1X;DP=1193;DPB=1193;DPRA=0;EPP=743.482;EPPR=1846.59;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13601;QR=33774;RO=849;RPL=0;RPP=743.482;RPPR=1846.59;RPR=341;RUN=1;SAF=341;SAP=743.482;SAR=0;SRF=849;SRP=1846.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:175:119,56:119:4746:56:2188:-144.411,0,-374.362 0/1:303:204,99:204:8151:99:3990:-267.866,0,-641.919 0/1:214:144,70:144:5704:70:2771:-185.07,0,-448.749 0/1:201:111,87:111:4376:87:3477:-253.051,0,-333.877 0/1:193:172,21:172:6853:21:853:-18.9818,0,-558.37 0/0:107:99,8:99:3944:8:322:0,-2.86236,-325.592 dDocent_Contig_13581 47 . T A 17708.2 . AB=0.0593773;ABP=2331.86;AC=4;AF=0.333334;AN=12;AO=82;CIGAR=7M1X11M6D4M;DP=1848;DPB=1663.21;DPRA=0;EPP=181.071;EPPR=339.589;GTI=0;LEN=1;MEANALT=40.4;MQM=60;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2296;QR=5358;RO=155;RPL=82;RPP=181.071;RPPR=339.589;RPR=0;RUN=1;SAF=82;SAP=181.071;SAR=0;SRF=155;SRP=339.589;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:300:72,0,23,14,0,0,0,0,42,29:72:2476:0,23,14,0,0,0,0,42,29:0,603,388,0,0,0,0,856,932:-53.4577,-75.1318,-276.236,-27.792,-228.899,-221.975,-44.4316,-245.538,-198.201,-241.324,-75.1318,-276.236,-228.899,-245.538,-276.236,-75.1318,-276.236,-228.899,-245.538,-276.236,-276.236,-75.1318,-276.236,-228.899,-245.538,-276.236,-276.236,-276.236,-75.1318,-276.236,-228.899,-245.538,-276.236,-276.236,-276.236,-276.236,-10.75,-211.856,-164.52,-181.158,-211.856,-211.856,-211.856,-211.856,-199.213,0,-201.11,-153.772,-170.411,-201.11,-201.11,-201.11,-201.11,-136.73,-192.38 1|1:215:18,0,37,25,0,2,1,2,29,0:18:621:0,37,25,0,2,1,2,29,0:0,1041,735,0,44,14,42,605,0:-85.2769,-90.6955,-141.152,-8.15501,-58.6134,-47.4752,-32.0821,-82.5398,0,-75.0141,-90.6955,-141.152,-58.6134,-82.5398,-141.152,-87.3387,-137.795,-55.2567,-79.1831,-137.795,-137.193,-89.7371,-140.193,-57.6551,-81.5815,-140.193,-136.837,-139.892,-87.5182,-137.975,-55.4362,-79.3626,-137.975,-134.618,-137.016,-137.373,-44.9883,-95.4449,-12.9081,-36.8336,-95.4449,-92.0883,-94.4866,-92.2678,-86.715,-90.6955,-141.152,-58.6134,-82.5398,-141.152,-137.795,-140.193,-137.975,-95.4449,-141.152 0|1:138:24,0,0,27,0,0,0,2,12,0:24:837:0,0,27,0,0,0,2,12,0:0,0,724,0,0,0,55,230,0:-49.802,-57.0267,-125.12,-57.0267,-125.12,-125.12,0,-68.0995,-68.0995,-59.9717,-57.0267,-125.12,-125.12,-68.0995,-125.12,-57.0267,-125.12,-125.12,-68.0995,-125.12,-125.12,-57.0267,-125.12,-125.12,-68.0995,-125.12,-125.12,-125.12,-52.6786,-120.772,-120.772,-63.7517,-120.772,-120.772,-120.772,-120.17,-39.9456,-108.039,-108.039,-51.0207,-108.039,-108.039,-108.039,-103.692,-104.427,-57.0267,-125.12,-125.12,-68.0995,-125.12,-125.12,-125.12,-120.772,-108.039,-125.12 0|1:225:41,0,48,15,0,15,0,2,10,21:41:1424:0,48,15,0,15,0,2,10,21:0,1371,417,0,432,0,54,263,708:-96.5816,-108.924,-224.704,0,-115.784,-101.335,-75.9177,-191.699,-82.7794,-187.183,-108.924,-224.704,-115.784,-191.699,-224.704,-74.5686,-190.35,-81.4303,-157.345,-190.35,-185.834,-108.924,-224.704,-115.784,-191.699,-224.704,-190.35,-224.704,-104.666,-220.446,-111.527,-187.441,-220.446,-186.092,-220.446,-219.844,-88.267,-204.047,-95.1282,-171.042,-204.047,-169.693,-204.047,-199.79,-201.037,-51.5419,-167.325,-58.4039,-134.319,-167.325,-132.97,-167.325,-163.067,-146.668,-161.003 0|0:467:0,57,3,0,150,33,62,100,0,0:0:0:57,3,0,150,33,62,100,0,0:1904,39,0,5717,939,1523,2650,0,0:-677.303,-523.168,-506.01,-674.697,-520.563,-673.794,-677.303,-523.168,-674.697,-677.303,-208.363,-54.2175,-205.758,-208.363,-163.209,-602.746,-448.611,-600.14,-602.746,-133.802,-592.812,-558.919,-404.785,-556.314,-558.919,-89.9752,-484.363,-540.255,-468.95,-314.816,-466.345,-468.95,0,-394.394,-350.572,-438.847,-677.303,-523.168,-674.697,-677.303,-208.363,-602.746,-558.919,-468.95,-677.303,-677.303,-523.168,-674.697,-677.303,-208.363,-602.746,-558.919,-468.95,-677.303,-677.303 0|0:503:0,16,0,1,148,6,62,188,0,0:0:0:16,0,1,148,6,62,188,0,0:522,0,32,5586,178,1527,4650,0,0:-819.624,-777.479,-772.663,-819.624,-777.479,-819.624,-817.046,-774.901,-817.046,-816.745,-361.852,-319.705,-361.852,-359.274,-317.3,-805.413,-763.268,-805.413,-802.835,-347.641,-803.607,-700.879,-658.734,-700.879,-698.301,-243.102,-686.668,-682.215,-457.796,-415.652,-457.796,-455.218,0,-443.586,-339.061,-401.203,-819.624,-777.479,-819.624,-817.046,-361.852,-805.413,-700.879,-457.796,-819.624,-819.624,-777.479,-819.624,-817.046,-361.852,-805.413,-700.879,-457.796,-819.624,-819.624 dDocent_Contig_13583 57 . T A 45.1646 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X3M1X;DP=72;DPB=72;DPRA=1;EPP=35.5824;EPPR=98.5551;GTI=0;LEN=1;MEANALT=1.33333;MQM=7;MQMR=7;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=588;QR=1724;RO=44;RPL=15;RPP=35.5824;RPPR=98.5551;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=44;SRP=98.5551;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:9:7,1,1:7:271:1,1:40,41:0,-1.7784,-3.77833,-1.77836,-3.75051,-3.7783 0|0:12:7,5,0:7:265:5,0:200,0:0,-0.393178,-1.25716,-2.10721,-2.76231,-4.40638 0|0:7:7,0,0:7:281:0,0:0,0:0,-2.10721,-4.47889,-2.10721,-4.47889,-4.47889 1|1:15:6,9,0:6:230:9,0:348,0:-1.88871,-0.667202,0,-3.69489,-2.70927,-5.667 0|0:14:5,0,8:5:196:0,8:0,302:-1.84299,-3.34814,-4.99228,-0.762625,-2.40824,0 0|0:15:12,0,3:12:481:0,3:0,109:0,-3.61236,-7.55813,-2.55746,-6.57317,-5.67008 dDocent_Contig_13585 61 . A G 3232.16 . AB=0.496503;ABP=3.02549;AC=7;AF=0.583333;AN=12;AO=109;CIGAR=1X;DP=184;DPB=184;DPRA=0;EPP=239.701;EPPR=165.871;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.899083;PAIREDR=0.96;PAO=0;PQA=0;PQR=0;PRO=0;QA=4277;QR=2978;RO=75;RPL=109;RPP=239.701;RPPR=165.871;RPR=0;RUN=1;SAF=109;SAP=239.701;SAR=0;SRF=75;SRP=165.871;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:15:12,3:12:480:3:117:-6.39384,0,-39.0351 0/1:27:16,11:16:631:11:419:-29.9261,0,-48.9957 0/1:9:5,4:5:200:4:159:-11.9827,0,-15.6691 0/1:35:25,10:25:979:10:385:-24.4622,0,-77.8725 0/1:57:14,43:14:566:43:1700:-136.07,0,-34.124 1/1:41:3,38:3:122:38:1497:-123.603,-0.969738,0 dDocent_Contig_13587 199 . T C 100.727 . AB=0.25;ABP=11.6962;AC=3;AF=0.3;AN=10;AO=9;CIGAR=1X;DP=125;DPB=125;DPRA=0.722222;EPP=22.5536;EPPR=254.901;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=3.46945e-18;PAIRED=0;PAIREDR=0.991379;PAO=0;PQA=0;PQR=0;PRO=0;QA=322;QR=4423;RO=116;RPL=9;RPP=22.5536;RPPR=254.901;RPR=0;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=254.901;SRR=116;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:39:-3.89656,-0.30103,0 ./.:.:.:.:.:.:.:. 0/0:14:14,0:14:534:0:0:0,-4.21442,-48.4031 0/1:16:12,4:12:457:4:133:-7.47647,0,-36.6621 0/0:46:46,0:46:1726:0:0:0,-13.8474,-155.598 0/0:48:44,4:44:1706:4:150:0,-0.584071,-139.932 dDocent_Contig_13588 68 . G A 592.313 . AB=0.185629;ABP=146.366;AC=2;AF=0.166667;AN=12;AO=31;CIGAR=1X;DP=407;DPB=407;DPRA=1.39167;EPP=70.3259;EPPR=819.484;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.516129;PAIREDR=0.398936;PAO=0;PQA=0;PQR=0;PRO=0;QA=1245;QR=14679;RO=376;RPL=13;RPP=4.76149;RPPR=15.2306;RPR=18;RUN=1;SAF=13;SAP=4.76149;SAR=18;SRF=211;SRP=15.2306;SRR=165;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:50,0:50:1998:0:0:0,-15.0515,-180.014 0/0:74:74,0:74:2822:0:0:0,-22.2762,-254.098 0/0:37:37,0:37:1451:0:0:0,-11.1381,-130.84 0/0:79:79,0:79:3033:0:0:0,-23.7814,-273.06 0/1:82:73,9:73:2857:9:364:-8.4403,0,-232.56 0/1:85:63,22:63:2518:22:881:-54.0129,0,-201.173 dDocent_Contig_13589 109 . G A 100.354 . AB=0.214286;ABP=12.937;AC=4;AF=0.333333;AN=12;AO=6;CIGAR=1X;DP=52;DPB=52;DPRA=0.485714;EPP=16.0391;EPPR=100.727;GTI=0;LEN=1;MEANALT=1.33333;MQM=31.8333;MQMR=58.5333;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.955556;PAO=0;PQA=0;PQR=0;PRO=0;QA=210;QR=1544;RO=45;RPL=0;RPP=16.0391;RPPR=100.727;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=100.727;SRR=45;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:624:0:0:0,-5.41854,-56.4853 0/0:11:11,0:11:368:0:0:0,-3.31133,-33.4431 1/1:3:0,3:0:0:3:105:-8.46624,-0.90309,0 0/1:10:8,2:8:277:2:70:-2.73465,0,-20.8344 0/1:4:2,1:2:69:1:35:-1.80979,0,-5.40935 0/0:6:6,0:6:206:0:0:0,-1.80618,-18.8766 dDocent_Contig_13590 7 . A C 76.9691 . AB=0.5;ABP=3.0103;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=108;DPB=108;DPRA=0.294118;EPP=9.52472;EPPR=231.015;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=115;QR=4018;RO=105;RPL=0;RPP=9.52472;RPPR=231.015;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=105;SRP=231.015;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:6:3,3:3:117:3:115:-8.91871,0,-9.1042 0/0:33:33,0:33:1264:0:0:0,-9.93399,-114.051 0/0:23:23,0:23:880:0:0:0,-6.92369,-79.5198 0/0:4:4,0:4:156:0:0:0,-1.20412,-14.4173 0/0:13:13,0:13:499:0:0:0,-3.91339,-45.2576 0/0:29:29,0:29:1102:0:0:0,-8.72987,-99.4845 dDocent_Contig_13591 18 . C A 149.244 . AB=0.134615;ABP=123.611;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=338;DPB=338;DPRA=2.22222;EPP=33.4109;EPPR=706.567;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=527;QR=13014;RO=324;RPL=0;RPP=33.4109;RPPR=706.567;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=324;SRP=706.567;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:70:70,0:70:2829:0:0:0,-21.0721,-254.71 0/1:104:90,14:90:3605:14:527:-16.4473,0,-293.164 0/0:53:53,0:53:2119:0:0:0,-15.9546,-190.883 0/0:55:55,0:55:2220:0:0:0,-16.5566,-199.962 0/0:25:25,0:25:1001:0:0:0,-7.52575,-90.3866 0/0:31:31,0:31:1240:0:0:0,-9.33193,-111.87 dDocent_Contig_13592 16 . T C 2726.05 . AB=0.44878;ABP=7.68161;AC=8;AF=0.666667;AN=12;AO=92;CIGAR=4M1X3M;DP=205;DPB=205;DPRA=0;EPP=202.786;EPPR=189.757;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3534;QR=3317;RO=86;RPL=0;RPP=202.786;RPPR=189.757;RPR=92;RUN=1;SAF=92;SAP=202.786;SAR=0;SRF=86;SRP=189.757;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:19:5,0,0,2,12:5:197:0,0,2,12:0,0,80,467:-36.8651,-38.3702,-54.5787,-38.3702,-54.5787,-54.5787,-31.7785,-47.9876,-47.9876,-47.3855,0,-16.2034,-16.2034,-9.61152,-12.591 1|1:17:0,2,0,0,15:0:0:2,0,0,15:68,0,0,576:-53.1706,-47.6598,-47.0578,-53.1706,-47.6598,-53.1706,-53.1706,-47.6598,-53.1706,-53.1706,-5.85582,0,-5.85582,-5.85582,-1.34037 0|1:46:9,6,0,0,31:9:347:6,0,0,31:237,0,0,1200:-95.8548,-79.0601,-105.748,-98.5641,-107.554,-127.058,-98.5641,-107.554,-127.058,-127.058,0,-8.98218,-28.4886,-28.4886,-19.1567 1|1:34:5,6,4,1,18:5:185:6,4,1,18:232,147,39,672:-57.4304,-39.8769,-53.2028,-46.9214,-42.9943,-60.8486,-55.7291,-51.8024,-58.8464,-70.5599,-3.93219,0,-7.04927,-15.8549,-13.6431 0|1:40:33,5,0,0,2:33:1276:5,0,0,2:187,0,0,78:-5.36708,0,-103.297,-15.3011,-104.802,-120.113,-15.3011,-104.802,-120.113,-120.113,-8.88476,-98.3899,-113.701,-113.701,-113.099 0|1:49:34,0,0,0,14:34:1312:0,0,0,14:0,0,0,541:-34.4635,-44.6985,-152.455,-44.6985,-152.455,-152.455,-44.6985,-152.455,-152.455,-152.455,0,-108.021,-108.021,-108.021,-103.807 dDocent_Contig_13593 26 . C T 79.84 . AB=0.10989;ABP=123.3;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=400;DPB=400;DPRA=1.00752;EPP=29.068;EPPR=845.542;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.997423;PAO=0;PQA=0;PQR=0;PRO=0;QA=482;QR=15497;RO=388;RPL=0;RPP=29.068;RPPR=845.542;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=388;SRP=845.542;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1384:0:0:0,-10.536,-124.812 0/1:91:81,10:81:3230:10:406:-9.50688,0,-263.366 0/0:43:41,2:41:1662:2:76:0,-5.72962,-142.587 0/0:62:62,0:62:2479:0:0:0,-18.6639,-223.25 0/0:74:74,0:74:2947:0:0:0,-22.2762,-265.323 0/0:95:95,0:95:3795:0:0:0,-28.5978,-341.557 dDocent_Contig_13594 23 . A T 1873.77 . AB=0.494845;ABP=3.03269;AC=8;AF=0.666667;AN=12;AO=62;CIGAR=1X;DP=111;DPB=111;DPRA=0;EPP=137.642;EPPR=109.412;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2463;QR=1927;RO=49;RPL=0;RPP=137.642;RPPR=109.412;RPR=62;RUN=1;SAF=62;SAP=137.642;SAR=0;SRF=49;SRP=109.412;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:18,3:18:690:3:122:-5.05086,0,-56.1002 0/1:32:12,20:12:468:20:806:-63.2239,0,-32.833 0/1:28:9,19:9:366:19:756:-59.9324,0,-24.8763 0/1:16:10,6:10:403:6:243:-17.4311,0,-31.8136 1/1:4:0,4:0:0:4:161:-14.8749,-1.20412,0 1/1:10:0,10:0:0:10:375:-34.0854,-3.0103,0 dDocent_Contig_13595 37 . A T 2632.71 . AB=0.583333;ABP=10.2485;AC=5;AF=0.5;AN=10;AO=85;CIGAR=1X;DP=157;DPB=157;DPRA=1.53409;EPP=187.585;EPPR=159.356;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3371;QR=2863;RO=72;RPL=0;RPP=187.585;RPPR=159.356;RPR=85;RUN=1;SAF=85;SAP=187.585;SAR=0;SRF=72;SRP=159.356;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 0/1:22:17,5:17:677:5:199:-11.6641,0,-54.6372 0/0:22:22,0:22:869:0:0:0,-6.62266,-78.5165 0/1:18:16,2:16:636:2:79:-2.07909,0,-52.1562 1/1:15:0,15:0:0:15:585:-52.9828,-4.51545,0 0/1:80:17,63:17:681:63:2508:-201.779,0,-37.5371 dDocent_Contig_13596 8 . A G 803.83 . AB=0.470588;ABP=3.52123;AC=5;AF=0.416667;AN=12;AO=32;CIGAR=1X;DP=69;DPB=69;DPRA=13.6;EPP=72.4974;EPPR=83.3548;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1203;QR=1421;RO=37;RPL=0;RPP=72.4974;RPPR=83.3548;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=37;SRP=83.3548;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:1:1,0:1:37:0:0:0,-0.30103,-3.69783 0/1:17:14,3:14:537:3:109:-5.05006,0,-43.5574 0/1:18:6,12:6:233:12:444:-34.8827,0,-15.9215 0/1:11:5,6:5:188:6:232:-17.9376,0,-13.973 0/1:10:2,8:2:78:8:301:-24.4357,0,-4.39317 0/1:12:9,3:9:348:3:117:-7.29802,0,-28.0679 dDocent_Contig_13599 18 . A G 655.672 . AB=0.909091;ABP=34.9902;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=186;DPB=186;DPRA=0.670732;EPP=46.4397;EPPR=363.475;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.95;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=805;QR=6618;RO=166;RPL=0;RPP=46.4397;RPPR=363.475;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=166;SRP=363.475;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:44,0:44:1740:0:0:0,-13.2453,-156.822 0/0:37:37,0:37:1458:0:0:0,-11.1381,-131.459 0/0:22:22,0:22:889:0:0:0,-6.62266,-80.3172 0/0:52:52,0:52:2084:0:0:0,-15.6536,-187.744 0/0:9:9,0:9:366:0:0:0,-2.70927,-33.3046 0/1:22:2,20:2:81:20:805:-66.1449,0,-1.06307 dDocent_Contig_13600 7 . A T 1782.88 . AB=0.4;ABP=3.87889;AC=3;AF=0.3;AN=10;AO=53;CIGAR=1X;DP=86;DPB=86;DPRA=3.27778;EPP=118.098;EPPR=74.6689;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2022;QR=1271;RO=33;RPL=0;RPP=118.098;RPPR=74.6689;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=33;SRP=74.6689;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:345:0:0:0,-2.70927,-31.4082 0/1:10:6,4:6:234:4:155:-11.3151,0,-18.4208 0/0:11:11,0:11:421:0:0:0,-3.31133,-38.2425 0/0:7:7,0:7:271:0:0:0,-2.10721,-24.7564 ./.:.:.:.:.:.:.:. 1/1:49:0,49:0:0:49:1867:-168.274,-14.7505,0 dDocent_Contig_13601 19 . T C 46.4596 . AB=0.103896;ABP=107.946;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=289;DPB=289;DPRA=2.27885;EPP=31.2394;EPPR=602.337;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0;PAIREDR=0.278986;PAO=0;PQA=0;PQR=0;PRO=0;QA=526;QR=10944;RO=276;RPL=0;RPP=31.2394;RPPR=602.337;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=276;SRP=602.337;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:56:55,1:55:2200:1:41:0,-12.7631,-194.077 0/0:66:64,2:64:2548:2:81:0,-12.1822,-221.76 0/0:38:36,2:36:1429:2:82:0,-3.65946,-121.085 0/1:77:69,8:69:2716:8:322:-6.16883,0,-221.385 0/0:19:19,0:19:760:0:0:0,-5.71957,-68.7199 0/0:33:33,0:33:1291:0:0:0,-9.93399,-116.461 dDocent_Contig_13602 10 . T A 1271.17 . AB=0.219858;ABP=195.24;AC=5;AF=0.416667;AN=12;AO=68;CIGAR=1X;DP=408;DPB=408;DPRA=0;EPP=150.67;EPPR=741.311;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.705882;PAIREDR=0.685294;PAO=0;PQA=0;PQR=0;PRO=0;QA=2676;QR=13548;RO=340;RPL=0;RPP=150.67;RPPR=741.311;RPR=68;RUN=1;SAF=68;SAP=150.67;SAR=0;SRF=340;SRP=741.311;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:47:32,15:32:1255:15:594:-39.647,0,-99.0654 0/1:66:55,11:55:2196:11:443:-20.3574,0,-177.942 0/1:29:23,6:23:933:6:235:-12.7886,0,-75.5416 0/1:53:40,13:40:1605:13:506:-29.9245,0,-128.726 0/0:126:120,6:120:4772:6:237:0,-16.2272,-407.691 0/1:87:70,17:70:2787:17:661:-33.6214,0,-224.743 dDocent_Contig_13604 20 . T A 268.05 . AB=0.154545;ABP=117.032;AC=1;AF=0.0833333;AN=12;AO=22;CIGAR=3X;DP=893;DPB=893;DPRA=0.899351;EPP=50.7827;EPPR=1892.19;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998851;PAO=0;PQA=0;PQR=0;PRO=0;QA=881;QR=34610;RO=870;RPL=0;RPP=50.7827;RPPR=1892.19;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=870;SRP=1892.19;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:168:168,0:168:6673:0:0:0,-50.573,-600.306 0|0:145:144,0:144:5666:0:0:0,-43.3483,-509.391 0|0:118:118,0:118:4734:0:0:0,-35.5215,-425.97 0|0:185:185,0:185:7404:0:0:0,-55.6905,-666.005 0|0:167:162,5:162:6430:5:202:0,-31.7099,-559.909 0|1:110:93,17:93:3703:17:679:-28.3279,0,-300.183 dDocent_Contig_13605 17 . T C 452.091 . AB=0.235955;ABP=56.9067;AC=3;AF=0.25;AN=12;AO=24;CIGAR=1X;DP=211;DPB=211;DPRA=2.35135;EPP=55.1256;EPPR=409.076;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.958333;PAIREDR=0.989305;PAO=0;PQA=0;PQR=0;PRO=0;QA=913;QR=7032;RO=187;RPL=0;RPP=55.1256;RPPR=409.076;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=187;SRP=409.076;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:834:0:0:0,-6.62266,-75.3784 0/1:22:17,5:17:655:5:190:-10.8414,0,-52.6609 0/0:15:15,0:15:553:0:0:0,-4.51545,-50.1037 0/1:23:21,2:21:766:2:77:-0.38451,0,-62.3269 0/0:85:82,3:82:3118:3:85:0,-17.6601,-272.841 0/1:44:30,14:30:1106:14:561:-37.5878,0,-86.5828 dDocent_Contig_13606 30 . T C 1475.08 . AB=0.364341;ABP=23.6309;AC=7;AF=0.583333;AN=12;AO=53;CIGAR=1X;DP=135;DPB=135;DPRA=0;EPP=118.098;EPPR=181.071;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.811321;PAIREDR=0.987805;PAO=0;PQA=0;PQR=0;PRO=0;QA=2134;QR=3180;RO=82;RPL=0;RPP=118.098;RPPR=181.071;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=82;SRP=181.071;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:20,10:20:772:10:406:-27.8691,0,-60.7648 0/1:25:14,11:14:544:11:438:-32.2477,0,-41.7733 0/1:31:21,10:21:822:10:399:-26.9331,0,-64.9487 0/1:32:26,6:26:1002:6:244:-12.7059,0,-80.8337 0/1:11:1,10:1:40:10:406:-33.5893,0,-0.684349 1/1:6:0,6:0:0:6:241:-22.0658,-1.80618,0 dDocent_Contig_13607 61 . G A 856.23 . AB=0.23913;ABP=30.2009;AC=4;AF=0.4;AN=10;AO=29;CIGAR=1X;DP=100;DPB=100;DPRA=1.18519;EPP=65.983;EPPR=157.185;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0.37931;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1130;QR=2771;RO=71;RPL=29;RPP=65.983;RPPR=157.185;RPR=0;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=71;SRP=157.185;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:13:6,7:6:229:7:270:-20.7458,0,-17.0581 0/1:33:29,4:29:1151:4:162:-5.03297,0,-93.9397 0/0:26:26,0:26:994:0:0:0,-7.82678,-89.7486 0/0:10:10,0:10:397:0:0:0,-3.0103,-36.0892 1/1:18:0,18:0:0:18:698:-63.1452,-5.41854,0 ./.:.:.:.:.:.:.:. dDocent_Contig_13608 41 . T G 461.457 . AB=0.365957;ABP=39.6851;AC=3;AF=0.25;AN=12;AO=87;CIGAR=1X;DP=401;DPB=401;DPRA=1.14344;EPP=191.928;EPPR=212.384;GTI=0;LEN=1;MEANALT=1;MQM=15.8276;MQMR=33.2548;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3430;QR=12419;RO=314;RPL=87;RPP=191.928;RPPR=212.384;RPR=0;RUN=1;SAF=87;SAP=191.928;SAR=0;SRF=314;SRP=684.853;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:44:43,1:43:1725:1:41:0,-11.7464,-150.635 0/0:92:92,0:92:3600:0:0:0,-27.6948,-296.185 0/0:30:30,0:30:1186:0:0:0,-9.0309,-96.3196 0/1:12:8,4:8:318:4:161:-1.93277,0,-20.996 0/1:124:96,28:96:3827:28:1077:-2.16103,0,-104.953 0/1:99:45,54:45:1763:54:2151:-47.1069,0,-40.0441 dDocent_Contig_13609 98 . N A 501.109 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=16;CIGAR=1X;DP=16;DPB=16;DPRA=0;EPP=37.7539;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=539;QR=0;RO=0;RPL=16;RPP=37.7539;RPPR=0;RPR=0;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:172:-15.8185,-1.50515,0 ./.:.:.:.:.:.:.:. 1/1:7:0,7:0:0:7:230:-21.0221,-2.10721,0 ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:137:-12.6682,-1.20412,0 dDocent_Contig_13610 111 . T G 2073.49 . AB=0.0666667;ABP=296.593;AC=5;AF=0.416666;AN=12;AO=15;CIGAR=1X3M;DP=506;DPB=506;DPRA=0;EPP=35.5824;EPPR=810.798;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.956989;PAO=0;PQA=0;PQR=0;PRO=0;QA=483;QR=12127;RO=372;RPL=0;RPP=35.5824;RPPR=810.798;RPR=15;RUN=1;SAF=0;SAP=35.5824;SAR=15;SRF=0;SRP=810.798;SRR=372;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:92:64,28,0:64:2066:28,0:923,0:-55.6787,0,-158.515,-74.9446,-166.943,-241.561 0|1:85:58,27,0:58:1873:27,0:879,0:-53.8233,0,-143.255,-71.283,-151.382,-222.341 0|1:65:38,26,0:38:1232:26,0:864,0:-58.5287,0,-91.6352,-69.9678,-99.462,-169.374 0|1:92:66,23,1:66:2148:23,1:761,35:-41.7783,0,-166.571,-58.7973,-170.647,-231.894 0|0:84:74,7,3:74:2421:7,3:232,95:0,-3.49907,-196.95,-14.6359,-191.412,-209.277 0|1:88:72,5,11:72:2387:5,11:170,353:-6.76144,-14.6398,-206.233,0,-179.291,-189.77 dDocent_Contig_13612 53 . A G 92.9922 . AB=0.12;ABP=128.435;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=408;DPB=408;DPRA=1.4;EPP=33.4109;EPPR=856.399;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.997455;PAO=0;PQA=0;PQR=0;PRO=0;QA=532;QR=15377;RO=393;RPL=14;RPP=33.4109;RPPR=856.399;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=393;SRP=856.399;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:100:100,0:100:3967:0:0:0,-30.103,-357.03 0/1:100:88,12:88:3374:12:451:-10.8221,0,-273.639 0/0:68:66,2:66:2569:2:81:0,-12.7843,-223.656 0/0:97:96,0:96:3761:0:0:0,-28.8989,-338.105 0/0:4:4,0:4:163:0:0:0,-1.20412,-15.0584 0/0:39:39,0:39:1543:0:0:0,-11.7402,-139.118 dDocent_Contig_13614 11 . C A 235.364 . AB=0.116071;ABP=289.8;AC=1;AF=0.0833333;AN=12;AO=26;CIGAR=1X;DP=1085;DPB=1085;DPRA=1.30081;EPP=59.4686;EPPR=2300.43;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=59.9868;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1025;QR=41720;RO=1058;RPL=0;RPP=59.4686;RPPR=2300.43;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=1058;SRP=2300.43;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:142:142,0:142:5614:0:0:0,-42.7463,-505.103 0/0:133:133,0:133:5279:0:0:0,-40.037,-474.984 0/0:217:217,0:217:8599:0:0:0,-65.3235,-773.432 0/0:193:193,0:193:7593:0:0:0,-58.0988,-683.039 0/1:224:197,26:197:7708:26:1025:-25.0593,0,-625.886 0/0:176:176,0:176:6927:0:0:0,-52.9813,-623.143 dDocent_Contig_13615 63 . T C 1322.06 . AB=0.428571;ABP=7.97367;AC=6;AF=0.5;AN=12;AO=48;CIGAR=1X;DP=112;DPB=112;DPRA=0;EPP=107.241;EPPR=141.985;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1930;QR=2534;RO=64;RPL=48;RPP=107.241;RPPR=141.985;RPR=0;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=64;SRP=141.985;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:15:10,5:10:401:5:204:-14.2286,0,-31.9348 0/1:41:27,14:27:1068:14:564:-38.7606,0,-84.0672 0/1:16:10,6:10:403:6:239:-17.0683,0,-31.8136 0/1:15:11,4:11:444:4:162:-10.4515,0,-35.7999 0/1:17:2,15:2:62:15:601:-49.3113,0,-0.771453 0/1:8:4,4:4:156:4:160:-12.3752,0,-12.0059 dDocent_Contig_13616 59 . T C 1946.33 . AB=0.375;ABP=33.4109;AC=6;AF=0.5;AN=12;AO=84;CIGAR=1X;DP=224;DPB=224;DPRA=0;EPP=185.414;EPPR=307.016;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.904762;PAIREDR=0.8;PAO=0;PQA=0;PQR=0;PRO=0;QA=3014;QR=5014;RO=140;RPL=84;RPP=185.414;RPPR=307.016;RPR=0;RUN=1;SAF=84;SAP=185.414;SAR=0;SRF=140;SRP=307.016;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:39:23,16:23:819:16:571:-39.9832,0,-62.2927 0/1:63:38,25:38:1362:25:891:-61.5449,0,-103.916 0/1:31:20,11:20:721:11:400:-27.0124,0,-55.8841 0/1:33:20,13:20:730:13:473:-32.9764,0,-56.0947 0/1:24:13,11:13:459:11:384:-27.6692,0,-34.4205 0/1:34:26,8:26:923:8:295:-16.6683,0,-73.1469 dDocent_Contig_13617 17 . A G 3179.25 . AB=0.236196;ABP=200.068;AC=2;AF=0.166667;AN=12;AO=77;CIGAR=1X3M1X;DP=326;DPB=326;DPRA=0;EPP=170.214;EPPR=372.161;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.935065;PAIREDR=0.994118;PAO=0;PQA=0;PQR=0;PRO=0;QA=3001;QR=6749;RO=170;RPL=0;RPP=170.214;RPPR=372.161;RPR=77;RUN=1;SAF=77;SAP=170.214;SAR=0;SRF=170;SRP=372.161;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:73:31,15,27:31:1223:15,27:585,1081:-79.7255,-40.9759,-137.081,0,-52.5431,-92.4991 0|0:52:25,7,20:25:991:7,20:277,790:-57.4719,-42.1995,-121.663,0,-58.7728,-75.55 0|0:56:23,11,21:23:925:11,21:437,843:-62.5462,-33.4915,-106.415,0,-40.2642,-69.9205 0|0:49:40,2,7:40:1583:2,7:79,285:-11.4787,-17.0216,-146.687,0,-123.776,-128.17 0|1:52:26,24,2:26:1042:24,2:929,77:-68.4829,0,-78.6366,-69.9877,-79.5403,-155.24 0|1:44:25,18,1:25:985:18,1:694,40:-49.4421,0,-75.601,-53.672,-77.7242,-134.401 dDocent_Contig_13618 16 . C T 994.545 . AB=0.0849057;ABP=161.651;AC=3;AF=0.25;AN=12;AO=9;CIGAR=1X2M;DP=216;DPB=216;DPRA=5.04762;EPP=22.5536;EPPR=307.016;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.95;PAO=0;PQA=0;PQR=0;PRO=0;QA=361;QR=5610;RO=140;RPL=0;RPP=22.5536;RPPR=307.016;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=140;SRP=307.016;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:36:23,0,0,13:23:926:0,0,13:0,0,524:-36.6693,-43.593,-119.912,-43.593,-119.912,-119.912,0,-76.7214,-76.7214,-72.808 0|1:62:33,13,4,12:33:1319:13,4,12:525,157,471:-33.3521,0,-104.73,-30.3747,-95.7312,-137.81,-4.55664,-69.9115,-100.282,-109.581 0|1:53:40,8,0,5:40:1591:8,0,5:319,0,199:-14.2293,0,-128.577,-26.2705,-130.986,-157.256,-9.88512,-114.6,-140.87,-139.365 0|1:44:24,9,5,6:24:968:9,5,6:360,204,245:-22.4255,0,-77.0808,-12.8176,-62.9581,-91.1058,-9.4331,-59.5738,-72.3946,-87.4206 0|0:16:15,0,0,1:15:604:0,0,1:0,0,41:0,-4.51545,-54.2905,-4.51545,-54.2905,-54.2905,-0.721913,-50.9059,-50.9059,-50.6049 0|0:5:5,0,0,0:5:202:0,0,0:0,0,0:0,-1.50515,-18.5619,-1.50515,-18.5619,-18.5619,-1.50515,-18.5619,-18.5619,-18.5619 dDocent_Contig_13619 17 . A T 494.074 . AB=0.268293;ABP=41.2494;AC=3;AF=0.25;AN=12;AO=25;CIGAR=1X;DP=217;DPB=217;DPRA=0;EPP=57.2971;EPPR=419.933;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.96;PAIREDR=0.932292;PAO=0;PQA=0;PQR=0;PRO=0;QA=983;QR=7692;RO=192;RPL=0;RPP=57.2971;RPPR=419.933;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=192;SRP=419.933;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:49:48,1:48:1882:1:41:0,-10.6559,-165.489 0/0:46:45,1:45:1820:1:41:0,-9.75281,-159.91 0/0:40:39,1:39:1571:1:32:0,-8.84189,-138.423 0/1:24:20,4:20:805:4:156:-7.19023,0,-65.5418 0/1:20:16,4:16:651:4:163:-9.03783,0,-52.9023 0/1:38:24,14:24:963:14:550:-38.4012,0,-75.5314 dDocent_Contig_13620 11 . A T 121.591 . AB=0.170732;ABP=41.6201;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=430;DPB=430;DPRA=0.526992;EPP=18.2106;EPPR=921.543;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=285;QR=17042;RO=423;RPL=0;RPP=18.2106;RPPR=921.543;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=423;SRP=921.543;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:568:0:0:0,-4.21442,-51.4622 0/0:33:33,0:33:1336:0:0:0,-9.93399,-120.497 0/0:30:30,0:30:1208:0:0:0,-9.0309,-108.992 0/1:41:34,7:34:1375:7:285:-13.682,0,-111.662 0/0:180:180,0:180:7258:0:0:0,-54.1854,-652.839 0/0:132:132,0:132:5297:0:0:0,-39.736,-476.568 dDocent_Contig_13621 107 . N T 190.597 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=8.76405;PAIRED=0.5;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=208;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:6:0,6:0:0:6:208:-19.0596,-1.80618,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13622 8 . A G 101.984 . AB=0.159091;ABP=47.4268;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=357;DPB=357;DPRA=0.919355;EPP=35.5824;EPPR=745.654;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.933333;PAIREDR=0.953216;PAO=0;PQA=0;PQR=0;PRO=0;QA=580;QR=13026;RO=342;RPL=0;RPP=35.5824;RPPR=745.654;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=342;SRP=745.654;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:44:37,7:37:1403:7:270:-11.4202,0,-113.306 0/0:90:83,7:83:3179:7:273:0,-2.15469,-261.328 0/0:37:37,0:37:1390:0:0:0,-11.1381,-125.376 0/0:37:36,1:36:1345:1:37:0,-7.44028,-117.63 0/0:71:71,0:71:2724:0:0:0,-21.3731,-245.346 0/0:78:78,0:78:2985:0:0:0,-23.4803,-268.818 dDocent_Contig_13623 23 . G T 599.227 . AB=0.488372;ABP=3.0608;AC=1;AF=0.0833333;AN=12;AO=22;CIGAR=1X;DP=224;DPB=224;DPRA=1.2;EPP=50.7827;EPPR=441.648;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=863;QR=8037;RO=202;RPL=0;RPP=50.7827;RPPR=441.648;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=202;SRP=441.648;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:69:69,0:69:2761:0:0:0,-20.7711,-248.603 0/0:23:23,0:23:921:0:0:0,-6.92369,-83.1921 0/0:41:40,1:40:1597:1:40:0,-8.34655,-139.966 0/0:36:36,0:36:1417:0:0:0,-10.8371,-127.78 0/1:43:22,21:22:857:21:823:-61.4455,0,-64.4908 0/0:12:12,0:12:484:0:0:0,-3.61236,-43.9122 dDocent_Contig_13624 9 . T C 8545.63 . AB=0.65445;ABP=42.5857;AC=8;AF=0.666667;AN=12;AO=266;CIGAR=1X;DP=332;DPB=332;DPRA=0;EPP=580.622;EPPR=146.327;GTI=0;LEN=1;MEANALT=1;MQM=59.8045;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10198;QR=2509;RO=66;RPL=0;RPP=580.622;RPPR=146.327;RPR=266;RUN=1;SAF=266;SAP=580.622;SAR=0;SRF=66;SRP=146.327;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:20,22:20:759:22:857:-64.7963,0,-55.9924 0/1:54:22,32:22:828:32:1199:-91.9381,0,-58.5801 0/1:28:7,21:7:271:21:803:-64.1661,0,-16.3276 0/1:67:17,50:17:651:50:1925:-153.254,0,-38.7572 1/1:59:0,59:0:0:59:2257:-203.349,-17.7608,0 1/1:82:0,82:0:0:82:3157:-284.281,-24.6845,0 dDocent_Contig_13626 8 . A T 53.4044 . AB=0.142857;ABP=49.5419;AC=2;AF=0.25;AN=8;AO=6;CIGAR=1X;DP=73;DPB=73;DPRA=1.35484;EPP=16.0391;EPPR=148.499;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=3.46945e-18;PAIRED=0;PAIREDR=0.835821;PAO=0;PQA=0;PQR=0;PRO=0;QA=229;QR=2555;RO=67;RPL=0;RPP=16.0391;RPPR=148.499;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=67;SRP=148.499;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:842:0:0:0,-6.62266,-76.1022 0/1:16:13,3:13:490:3:117:-6.0939,0,-39.6278 0/1:26:23,3:23:882:3:112:-2.61912,0,-71.8714 0/0:9:9,0:9:341:0:0:0,-2.70927,-31.0454 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13627 26 . G T 828.61 . AB=0.195238;ABP=172.427;AC=2;AF=0.166667;AN=12;AO=52;CIGAR=1X;DP=526;DPB=526;DPRA=1.67857;EPP=115.927;EPPR=1021.45;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.942308;PAIREDR=0.966173;PAO=0;PQA=0;PQR=0;PRO=0;QA=2080;QR=18765;RO=473;RPL=0;RPP=115.927;RPPR=1030.12;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=472;SRP=1021.45;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:97:91,6:91:3612:6:229:0,-8.23028,-304.13 0/0:105:103,2:103:4086:2:80:0,-24.0164,-360.119 0/0:56:56,0:56:2183:0:0:0,-16.8577,-196.641 0/0:58:54,3:54:2121:3:119:0,-6.46985,-179.975 0/1:88:68,20:68:2688:20:808:-46.5423,0,-215.544 0/1:122:101,21:101:4075:21:844:-39.5406,0,-329.981 dDocent_Contig_13628 14 . C G 805.042 . AB=0.174721;ABP=250.227;AC=4;AF=0.333333;AN=12;AO=49;CIGAR=1X;DP=405;DPB=405;DPRA=1.38824;EPP=109.412;EPPR=773.883;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997183;PAO=0;PQA=0;PQR=0;PRO=0;QA=1939;QR=14186;RO=355;RPL=0;RPP=109.412;RPPR=773.883;RPR=49;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=355;SRP=773.883;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:51:51,0:51:2020:0:0:0,-15.3525,-181.995 0/1:85:67,18:67:2692:18:715:-39.0903,0,-216.804 0/1:53:44,9:44:1712:9:337:-14.7191,0,-138.345 0/1:74:64,10:64:2592:10:406:-14.6244,0,-211.121 0/0:85:83,2:83:3343:2:81:0,-17.9018,-293.23 0/1:57:46,10:46:1827:10:400:-19.2923,0,-147.586 dDocent_Contig_13629 95 . T C 1212.73 . AB=0.518868;ABP=3.33807;AC=5;AF=0.416667;AN=12;AO=55;CIGAR=1X2M;DP=117;DPB=117;DPRA=1.92727;EPP=122.441;EPPR=128.956;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.527273;PAIREDR=0.724138;PAO=0;PQA=0;PQR=0;PRO=0;QA=1777;QR=1836;RO=58;RPL=55;RPP=122.441;RPPR=128.956;RPR=0;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=58;SRP=128.956;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:20:11,0,9:11:341:0,9:0,304:-21.6682,-24.9795,-52.3367,0,-27.6824,-24.9731 0|1:22:5,4,13:5:162:4,13:128,417:-32.1022,-23.2954,-35.1634,0,-2.7631,-9.16003 0|1:15:7,0,8:7:227:0,8:0,266:-19.7487,-21.8559,-40.1698,0,-18.6419,-16.2337 0|1:28:10,0,18:10:318:0,18:0,549:-41.2714,-44.2817,-69.8892,0,-25.9208,-20.5022 0|0:11:11,0,0:11:352:0,0:0,0:0,-3.31133,-31.9916,-3.31133,-31.9916,-31.9916 0|1:21:14,0,7:14:436:0,7:0,241:-15.7048,-19.9192,-54.9141,0,-35.3281,-33.2209 dDocent_Contig_13631 154 . A G 68.4055 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=3;CIGAR=1X;DP=105;DPB=105;DPRA=0.44186;EPP=9.52472;EPPR=222.329;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=101;QR=3552;RO=101;RPL=0;RPP=9.52472;RPPR=222.329;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=222.329;SRR=101;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:1024:0:0:0,-8.72987,-92.4728 0/0:17:16,1:16:563:1:34:0,-1.7186,-47.6009 0/0:24:23,0:23:810:0:0:0,-6.92369,-73.1389 0/0:30:30,0:30:1049:0:0:0,-9.0309,-94.719 1/1:2:0,2:0:0:2:67:-6.36314,-0.60206,0 0/0:3:3,0:3:106:0:0:0,-0.90309,-9.88916 dDocent_Contig_13632 16 . C G 294.933 . AB=0.233333;ABP=40.0701;AC=3;AF=0.25;AN=12;AO=14;CIGAR=1X;DP=128;DPB=128;DPRA=0.882353;EPP=33.4109;EPPR=250.558;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=556;QR=4564;RO=114;RPL=0;RPP=33.4109;RPPR=250.558;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=114;SRP=250.558;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:751:0:0:0,-5.71957,-67.9108 0/0:26:26,0:26:1047:0:0:0,-7.82678,-94.5204 0/0:23:23,0:23:916:0:0:0,-6.92369,-82.7427 0/1:34:31,3:31:1248:3:114:-0.395898,0,-102.356 0/1:14:11,3:11:447:3:122:-7.15807,0,-36.3711 0/1:12:4,8:4:155:8:320:-25.5553,0,-10.7111 dDocent_Contig_13633 21 . C A 498.108 . AB=0.3125;ABP=22.5536;AC=1;AF=0.0833333;AN=12;AO=22;CIGAR=1X;DP=352;DPB=352;DPRA=0.983051;EPP=50.7827;EPPR=719.596;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.863636;PAIREDR=0.89697;PAO=0;PQA=0;PQR=0;PRO=0;QA=863;QR=13166;RO=330;RPL=0;RPP=50.7827;RPPR=719.596;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=330;SRP=719.596;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:34,0:34:1331:0:0:0,-10.235,-120.038 0/0:92:92,0:92:3668:0:0:0,-27.6948,-330.139 0/0:53:53,0:53:2132:0:0:0,-15.9546,-192.047 0/0:57:57,0:57:2256:0:0:0,-17.1587,-203.208 0/1:64:44,20:44:1772:20:781:-51.3337,0,-140.424 0/0:52:50,2:50:2007:2:82:0,-7.87388,-173.037 dDocent_Contig_13634 12 . G T 1010.92 . AB=0.206349;ABP=191.756;AC=5;AF=0.416667;AN=12;AO=55;CIGAR=1X;DP=307;DPB=307;DPRA=0;EPP=122.441;EPPR=550.221;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992063;PAO=0;PQA=0;PQR=0;PRO=0;QA=2165;QR=9678;RO=252;RPL=0;RPP=122.441;RPPR=550.221;RPR=55;RUN=1;SAF=55;SAP=122.441;SAR=0;SRF=252;SRP=550.221;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:49:31,18:31:1180:18:719:-50.2871,0,-91.7355 0/1:58:48,10:48:1825:10:396:-18.5385,0,-147.018 0/1:53:46,7:46:1752:7:272:-8.89003,0,-141.962 0/1:42:33,9:33:1293:9:336:-17.9402,0,-104.001 0/1:50:42,8:42:1614:8:326:-14.6584,0,-130.46 0/0:55:52,3:52:2014:3:116:0,-5.73894,-170.659 dDocent_Contig_13635 65 . C A 680.816 . AB=0.231884;ABP=89.1768;AC=4;AF=0.333333;AN=12;AO=32;CIGAR=1X;DP=174;DPB=174;DPRA=1.91667;EPP=72.4974;EPPR=311.359;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.788732;PAO=0;PQA=0;PQR=0;PRO=0;QA=1282;QR=5526;RO=142;RPL=32;RPP=72.4974;RPPR=311.359;RPR=0;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=142;SRP=311.359;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1048:0:0:0,-8.12781,-94.6141 0/1:28:23,5:23:878:5:195:-9.49465,0,-70.8927 0/0:9:9,0:9:352:0:0:0,-2.70927,-32.038 0/1:35:29,6:29:1134:6:242:-11.6209,0,-91.8132 0/1:45:37,8:37:1438:8:322:-15.8022,0,-116.125 0/1:30:17,13:17:676:13:523:-38.3857,0,-52.1407 dDocent_Contig_13636 9 . T A 4637.36 . AB=0.426415;ABP=15.4737;AC=7;AF=0.583333;AN=12;AO=160;CIGAR=1X4M1X;DP=312;DPB=312;DPRA=0;EPP=350.446;EPPR=285.302;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.99375;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6061;QR=5055;RO=130;RPL=0;RPP=350.446;RPPR=285.302;RPR=160;RUN=1;SAF=160;SAP=350.446;SAR=0;SRF=130;SRP=285.302;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:42:25,1,6,9:25:968:1,6,9:40,222,347:-20.9745,-25.204,-104.426,-10.3471,-86.5698,-88.0591,0,-76.2309,-61.3705,-76.8172 0|1:83:57,0,2,23:57:2218:0,2,23:0,73,874:-54.5219,-71.6806,-253.968,-65.7175,-248.004,-247.402,0,-182.295,-176.332,-175.372 0|1:37:16,5,3,13:16:625:5,3,13:190,107,496:-35.8818,-25.1163,-75.0001,-31.9808,-67.7871,-82.4643,0,-35.8149,-42.6779,-47.4816 0|1:72:29,0,3,40:29:1125:0,3,40:0,118,1499:-114.022,-122.752,-215.184,-113.044,-205.477,-204.574,0,-92.423,-82.7158,-80.3818 1|1:47:0,0,0,47:0:0:0,0,47:0,0,1795:-161.806,-161.806,-161.806,-161.806,-161.806,-161.806,-14.1484,-14.1484,-14.1484,0 0|1:31:3,0,0,28:3:119:0,0,28:0,0,1050:-85.4744,-86.3775,-96.1757,-86.3775,-96.1757,-96.1757,0,-10.1923,-10.1923,-1.76346 dDocent_Contig_13637 11 . T A 5656.89 . AB=0.509333;ABP=3.29404;AC=4;AF=0.333333;AN=12;AO=191;CIGAR=1X;DP=561;DPB=561;DPRA=1.00806;EPP=417.762;EPPR=806.455;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7611;QR=14008;RO=370;RPL=0;RPP=417.762;RPPR=806.455;RPR=191;RUN=1;SAF=191;SAP=417.762;SAR=0;SRF=370;SRP=806.455;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:82:37,45:37:1414:45:1789:-136.541,0,-102.852 0/1:141:68,73:68:2581:73:2925:-220.896,0,-190.037 0/1:50:32,18:32:1217:18:723:-50.343,0,-94.7734 0/1:102:47,55:47:1756:55:2174:-165.131,0,-127.593 0/0:113:113,0:113:4248:0:0:0,-34.0164,-382.397 0/0:73:73,0:73:2792:0:0:0,-21.9752,-251.451 dDocent_Contig_13638 119 . G T 1785.41 . AB=0.235294;ABP=13.3567;AC=8;AF=0.666666;AN=12;AO=4;CIGAR=1X1M1X2M4X;DP=166;DPB=166;DPRA=4.25;EPP=11.6962;EPPR=178.9;GTI=0;LEN=1;MEANALT=2;MQM=31;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=156;QR=2548;RO=81;RPL=0;RPP=11.6962;RPPR=178.9;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=178.9;SRR=81;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:30:19,10,0:19:599:10,0:381,0:-19.9238,0,-45.3243,-25.6434,-48.3346,-73.8297 0|1:43:21,22,0:21:673:22,0:832,0:-49.3362,0,-47.93,-55.6578,-54.5526,-109.894 0|1:24:12,11,0:12:380:11,0:415,0:-23.0606,0,-27.4956,-26.673,-30.8069,-57.2699 0|1:48:29,19,0:29:896:19,0:724,0:-39.4113,0,-66.4815,-48.1411,-72.2011,-120.031 1|1:17:0,13,4:0:0:13,4:492,156:-43.9771,-9.9803,-6.06691,-34.3042,0,-33.1001 1|1:4:0,4,0:0:0:4,0:153,0:-12.0534,-1.20412,0,-12.0534,-1.20412,-12.0534 dDocent_Contig_13639 52 . A G 39.0211 . AB=0.4;ABP=3.44459;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=78;DPB=78;DPRA=0.888889;EPP=9.52472;EPPR=165.871;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=109;QR=2927;RO=75;RPL=3;RPP=9.52472;RPPR=165.871;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=75;SRP=165.871;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:870:0:0:0,-6.62266,-78.6132 0/0:13:13,0:13:520:0:0:0,-3.91339,-47.1477 0/1:5:3,2:3:119:2:73:-5.42492,0,-9.59024 0/0:12:12,0:12:473:0:0:0,-3.61236,-42.9188 0/0:19:18,1:18:692:1:36:0,-2.12129,-59.0046 0/0:7:7,0:7:253:0:0:0,-2.10721,-23.1037 dDocent_Contig_13640 145 . T G 739.641 . AB=0.402985;ABP=8.4876;AC=2;AF=0.2;AN=10;AO=30;CIGAR=1X;DP=321;DPB=321;DPRA=1.07317;EPP=68.1545;EPPR=634.909;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1158;QR=11534;RO=291;RPL=0;RPP=68.1545;RPPR=634.909;RPR=30;RUN=1;SAF=0;SAP=68.1545;SAR=30;SRF=0;SRP=634.909;SRR=291;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:56:56,0:56:2200:0:0:0,-16.8577,-198.162 0/0:131:128,3:128:5084:3:83:0,-31.6944,-449.701 0/1:50:37,13:37:1469:13:518:-31.9124,0,-117.404 0/0:67:67,0:67:2658:0:0:0,-20.169,-239.338 ./.:.:.:.:.:.:.:. 0/1:17:3,14:3:123:14:557:-45.3527,0,-6.34728 dDocent_Contig_13641 45 . T C 12261.6 . AB=0.775304;ABP=328.221;AC=6;AF=0.6;AN=10;AO=387;CIGAR=1X;DP=498;DPB=498;DPRA=0;EPP=826.088;EPPR=226.985;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=15352;QR=4390;RO=111;RPL=2;RPP=826.088;RPPR=226.985;RPR=385;RUN=1;SAF=387;SAP=843.37;SAR=0;SRF=111;SRP=244.044;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:137:36,101:36:1425:101:3992:-318.054,0,-87.2705 0/1:120:23,97:23:898:97:3859:-311.207,0,-45.0052 0/1:140:20,120:20:800:120:4750:-385.285,0,-30.1726 0/1:97:32,65:32:1267:65:2589:-203.947,0,-85.1056 ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:162:-14.967,-1.20412,0 dDocent_Contig_13642 97 . G A 1178.6 . AB=0.228426;ABP=129.209;AC=6;AF=0.5;AN=12;AO=69;CIGAR=1X;DP=294;DPB=294;DPRA=0;EPP=152.842;EPPR=491.592;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.898551;PAIREDR=0.982222;PAO=0;PQA=0;PQR=0;PRO=0;QA=2164;QR=7659;RO=225;RPL=69;RPP=152.842;RPPR=491.592;RPR=0;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=225;SRP=491.592;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:61:52,9:52:1755:9:291:-8.14277,0,-139.87 0/1:64:57,7:57:1928:7:236:-2.30447,0,-154.531 0/1:37:28,9:28:950:9:299:-16.0955,0,-74.6714 0/0:75:72,3:72:2466:3:94:0,-13.8063,-213.432 1/1:22:1,21:1:35:21:620:-52.5817,-3.12403,0 0/1:35:15,20:15:525:20:624:-45.9224,0,-37.0453 dDocent_Contig_13643 8 . A G 21757.4 . AB=0.163793;ABP=230.79;AC=2;AF=0.166667;AN=12;AO=38;CIGAR=1X3M1X3M;DP=736;DPB=736;DPRA=2.7619;EPP=85.5263;EPPR=79.8198;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.930233;PAO=0;PQA=0;PQR=0;PRO=0;QA=1425;QR=1636;RO=43;RPL=0;RPP=85.5263;RPPR=96.3836;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=41;SRP=79.8198;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:66:6,0,0,60:6:233:0,0,60:0,0,2366:-193.244,-195.05,-214.195,-195.05,-214.195,-214.195,0,-19.5337,-19.5337,-1.47194 1|0:145:10,21,0,114:10:385:21,0,114:796,0,4531:-403.659,-341.414,-366.703,-406.669,-373.024,-438.279,-33.6406,0,-65.2533,-30.9359 0|0:73:14,0,0,59:14:540:0,0,59:0,0,2372:-191.656,-195.87,-240.212,-195.87,-240.212,-240.212,0,-44.7304,-44.7304,-26.9696 0|0:136:13,8,0,114:13:478:8,0,114:316,0,4525:-368.567,-346.477,-383.144,-372.481,-385.552,-411.556,0,-13.0488,-39.0619,-4.74451 0|0:84:0,0,0,84:0:0:0,0,84:0,0,3356:-302.097,-302.097,-302.097,-302.097,-302.097,-302.097,-25.2865,-25.2865,-25.2865,0 1|0:232:0,4,38,189:0:0:4,38,189:156,1425,7401:-725.185,-712.362,-711.158,-608.475,-595.652,-597.036,-116.696,-103.872,0,-59.8015 dDocent_Contig_13644 1 . N G 6973.62 . AB=0.0465116;ABP=79.8198;AC=12;AF=1;AN=12;AO=5;CIGAR=1X5M;DP=277;DPB=282.833;DPRA=0.916667;EPP=3.44459;EPPR=0;GTI=0;LEN=1;MEANALT=3;MQM=49.8;MQMR=0;NS=6;NUMALT=4;ODDS=0;PAIRED=0.4;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=182;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=2;SAP=3.44459;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|1:67:0,0,15,52,0:0:0:0,15,52,0:0,501,1731,0:-172.325,-172.325,-172.325,-133.642,-133.642,-129.127,-39.0025,-39.0025,0,-23.3489,-172.325,-172.325,-133.642,-39.0025,-172.325 1|1:48:0,0,3,45,0:0:0:0,3,45,0:0,103,1507,0:-129.95,-129.95,-129.95,-121.976,-121.976,-121.073,-13.5464,-13.5464,-5.24349,0,-129.95,-129.95,-121.976,-13.5464,-129.95 1|1:43:0,3,5,34,0:0:0:3,5,34,0:106,170,1109,0:-99.2561,-90.7135,-89.8104,-86.1244,-77.5813,-84.6192,-13.1486,-4.58904,0,-2.91356,-99.2561,-90.7135,-86.1244,-13.1486,-99.2561 1|1:31:0,0,4,27,0:0:0:0,4,27,0:0,136,897,0:-79.6768,-79.6768,-79.6768,-69.176,-69.176,-67.9719,-10.5083,-10.5083,0,-2.38048,-79.6768,-79.6768,-69.176,-10.5083,-79.6768 1|1:45:0,1,0,41,3:0:0:1,0,41,3:34,0,1355,104:-116.352,-113.681,-113.38,-116.352,-113.681,-116.352,-12.3422,-9.67293,-12.3422,0,-108.104,-105.432,-108.104,-4.09526,-107.201 1|1:43:0,0,8,33,2:0:0:0,8,33,2:0,277,1099,78:-106.986,-106.986,-106.986,-85.6547,-85.6547,-83.2465,-21.3212,-21.3212,0,-11.3872,-100.572,-100.572,-79.2398,-14.9017,-99.9699 dDocent_Contig_13645 21 . C T 95.3595 . AB=0.217391;ABP=18.9659;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=122;DPB=122;DPRA=1.16162;EPP=13.8677;EPPR=254.901;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.724138;PAO=0;PQA=0;PQR=0;PRO=0;QA=194;QR=4586;RO=116;RPL=0;RPP=13.8677;RPPR=254.901;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=116;SRP=254.901;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:680:0:0:0,-5.11751,-61.5299 0/0:28:28,0:28:1115:0:0:0,-8.42884,-100.636 0/0:10:10,0:10:396:0:0:0,-3.0103,-35.9941 0/0:33:33,0:33:1296:0:0:0,-9.93399,-116.906 0/0:11:11,0:11:439:0:0:0,-3.31133,-39.8648 0/1:23:17,5:17:660:5:194:-11.0588,0,-52.9817 dDocent_Contig_13646 21 . G C 54.1936 . AB=0.166667;ABP=26.1727;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=359;DPB=359;DPRA=0.567686;EPP=18.2106;EPPR=767.369;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.977273;PAO=0;PQA=0;PQR=0;PRO=0;QA=251;QR=12386;RO=352;RPL=0;RPP=18.2106;RPPR=767.369;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=352;SRP=767.369;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:20,4:20:687:4:150:-6.64121,0,-54.9236 0/0:45:45,0:45:1530:0:0:0,-13.5463,-137.98 0/0:34:34,0:34:1254:0:0:0,-10.235,-113.162 0/0:37:35,2:35:1235:2:63:0,-5.15534,-105.463 0/0:69:68,1:68:2401:1:38:0,-16.9738,-212.536 0/0:150:150,0:150:5279:0:0:0,-45.1545,-475.227 dDocent_Contig_13647 42 . T C 751.526 . AB=0.31;ABP=34.3664;AC=3;AF=0.25;AN=12;AO=32;CIGAR=1X;DP=173;DPB=173;DPRA=1.23;EPP=72.4974;EPPR=309.188;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.843972;PAO=0;PQA=0;PQR=0;PRO=0;QA=1224;QR=4891;RO=141;RPL=0;RPP=72.4974;RPPR=309.188;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=141;SRP=309.188;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:14:9,5:9:311:5:180:-12.3313,0,-24.1059 0/1:55:42,13:42:1473:13:513:-29.9599,0,-116.284 0/0:28:28,0:28:970:0:0:0,-8.42884,-87.601 0/1:31:18,13:18:630:13:523:-38.0832,0,-47.6881 0/0:22:22,0:22:737:0:0:0,-6.62266,-66.6322 0/0:23:22,1:22:770:1:8:0,-6.12369,-68.8112 dDocent_Contig_13648 12 . C A 328.177 . AB=0.213333;ABP=56.5443;AC=2;AF=0.2;AN=10;AO=16;CIGAR=1X;DP=196;DPB=196;DPRA=0.929752;EPP=37.7539;EPPR=393.875;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=644;QR=7171;RO=180;RPL=0;RPP=37.7539;RPPR=393.875;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=180;SRP=393.875;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:59,0:59:2348:0:0:0,-17.7608,-211.475 0/0:6:6,0:6:243:0:0:0,-1.80618,-22.2482 0/1:63:55,8:55:2202:8:326:-10.745,0,-179.379 0/0:56:56,0:56:2227:0:0:0,-16.8577,-200.603 0/1:12:4,8:4:151:8:318:-25.3738,0,-10.3417 ./.:.:.:.:.:.:.:. dDocent_Contig_13649 55 . T C 138.139 . AB=0.15625;ABP=68.6973;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=230;DPB=230;DPRA=0.916667;EPP=29.068;EPPR=476.391;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.802752;PAO=0;PQA=0;PQR=0;PRO=0;QA=476;QR=8582;RO=218;RPL=12;RPP=29.068;RPPR=476.391;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=218;SRP=476.391;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:24,6:24:926:6:236:-12.5788,0,-74.613 0/0:46:44,2:44:1757:2:81:0,-6.16165,-150.666 0/0:36:36,0:36:1444:0:0:0,-10.8371,-130.212 0/0:46:46,0:46:1805:0:0:0,-13.8474,-162.671 0/0:38:38,0:38:1453:0:0:0,-11.4391,-131.011 0/1:34:30,4:30:1197:4:159:-4.45673,0,-97.7741 dDocent_Contig_13652 47 . T C 85.3628 . AB=0.25;ABP=11.6962;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=77;DPB=77;DPRA=1.31148;EPP=11.6962;EPPR=161.528;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.25;PAIREDR=0.821918;PAO=0;PQA=0;PQR=0;PRO=0;QA=161;QR=2909;RO=73;RPL=0;RPP=11.6962;RPPR=161.528;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=73;SRP=161.528;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:1:1,0:1:41:0:0:0,-0.30103,-4.09457 0/0:17:17,0:17:681:0:0:0,-5.11751,-61.6176 0/0:15:15,0:15:603:0:0:0,-4.51545,-54.6071 0/0:19:19,0:19:755:0:0:0,-5.71957,-68.2677 0/1:16:12,4:12:465:4:161:-10.0588,0,-37.3712 0/0:9:9,0:9:364:0:0:0,-2.70927,-33.1239 dDocent_Contig_13653 22 . G A 37.3278 . AB=0.1875;ABP=16.582;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=215;DPB=215;DPRA=0.41573;EPP=11.6962;EPPR=461.191;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.677725;PAO=0;PQA=0;PQR=0;PRO=0;QA=133;QR=8251;RO=211;RPL=0;RPP=11.6962;RPPR=461.191;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=211;SRP=461.191;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:866:0:0:0,-6.62266,-78.2481 0/0:89:89,0:89:3498:0:0:0,-26.7917,-314.858 0/0:28:28,0:28:1086:0:0:0,-8.42884,-98.0187 0/0:39:39,0:39:1493:0:0:0,-11.7402,-134.622 0/1:16:13,3:13:516:3:108:-5.25558,0,-41.9652 0/0:21:20,1:20:792:1:25:0,-3.82177,-69.0979 dDocent_Contig_13654 21 . G A 4326.4 . AB=0.0882353;ABP=153.225;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=2X4M;DP=360;DPB=360;DPRA=0;EPP=22.5536;EPPR=337.417;GTI=0;LEN=1;MEANALT=4.5;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=354;QR=5897;RO=154;RPL=0;RPP=22.5536;RPPR=337.417;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=154;SRP=337.417;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:54:25,4,2,0,21,2:25:961:4,2,0,21,2:161,78,0,839,78:-61.58,-55.8358,-133.514,-62.6946,-128.306,-140.974,-69.1058,-134.718,-141.576,-147.988,0,-65.6086,-72.468,-78.88,-72.5583,-62.6948,-128.306,-135.165,-141.577,-72.4682,-140.975 0|0:113:68,1,0,0,38,6:68:2554:1,0,0,38,6:37,0,0,1520,241:-103.123,-120.566,-329.455,-123.593,-329.756,-332.783,-123.593,-329.756,-332.783,-332.783,0,-206.156,-209.183,-209.183,-197.744,-103.733,-309.897,-312.923,-312.923,-189.322,-311.117 0|0:76:26,10,3,0,31,6:26:1013:10,3,0,31,6:361,120,0,1253,230:-95.0841,-73.853,-154.091,-93.0253,-147.216,-175.374,-102.911,-157.101,-176.277,-186.163,0,-54.2033,-73.3762,-83.2625,-73.9305,-84.0345,-138.225,-157.4,-167.286,-64.3849,-165.48 0|0:77:32,4,1,5,28,6:32:1249:4,1,5,28,6:159,40,203,1103,237:-81.1072,-77.6485,-179.115,-87.4449,-177.024,-189.815,-73.996,-163.576,-173.372,-175.162,0,-89.5813,-99.3778,-85.9288,-94.2443,-71.2371,-160.816,-170.613,-157.164,-83.1698,-172.102 0|0:15:0,0,2,0,13,0:0:0:0,2,0,13,0:0,76,0,518,0:-49.282,-49.282,-49.282,-43.052,-43.052,-42.4499,-49.282,-49.282,-43.052,-49.282,-6.6122,-6.6122,0,-6.6122,-2.69881,-49.282,-49.282,-43.052,-49.282,-6.6122,-49.282 1|0:25:3,0,0,4,16,2:3:120:0,0,4,16,2:0,0,151,633,78:-53.6711,-54.5742,-64.4604,-54.5742,-64.4604,-64.4604,-42.2038,-52.0898,-52.0898,-50.8856,-2.47401,-12.3653,-12.3653,0,-7.54885,-48.1627,-58.049,-58.049,-45.6788,-5.9531,-57.447 dDocent_Contig_13655 1 . N G 76.8682 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=81;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-7.68573,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13656 16 . A C 2256.82 . AB=0.253333;ABP=201.193;AC=3;AF=0.25;AN=12;AO=103;CIGAR=1X;DP=966;DPB=966;DPRA=0.6625;EPP=226.672;EPPR=1874.82;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4128;QR=34091;RO=862;RPL=0;RPP=226.672;RPPR=1874.82;RPR=103;RUN=1;SAF=103;SAP=226.672;SAR=0;SRF=862;SRP=1874.82;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:172:146,26:146:5731:26:1053:-43.2816,0,-463.851 0/0:152:146,6:146:5794:6:236:0,-24.1477,-499.652 0/1:68:49,19:49:1961:19:749:-47.264,0,-156.216 0/1:135:85,50:85:3347:50:2009:-140.358,0,-260.658 0/0:224:224,0:224:8808:0:0:0,-67.4307,-792.248 0/0:215:212,2:212:8450:2:81:0,-57.1227,-752.359 dDocent_Contig_13657 98 . N G 60.1586 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=59;QR=0;RO=0;RPL=4;RPP=11.6962;RPPR=0;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:28:-2.61332,-0.90309,0 1/1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13659 11 . C T 58.4792 . AB=0.106383;ABP=129.51;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=488;DPB=488;DPRA=0.780627;EPP=26.8965;EPPR=1038.8;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=423;QR=18754;RO=477;RPL=0;RPP=26.8965;RPPR=1038.8;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=477;SRP=1038.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:94:84,10:84:3276:10:389:-7.06976,0,-266.631 0/0:177:177,0:177:6931:0:0:0,-53.2823,-623.512 0/0:74:74,0:74:2922:0:0:0,-22.2762,-263.085 0/0:79:79,0:79:3120:0:0:0,-23.7814,-280.898 0/0:21:21,0:21:841:0:0:0,-6.32163,-76.0029 0/0:43:42,1:42:1664:1:34:0,-9.54538,-146.593 dDocent_Contig_13660 10 . G T 10936.2 . AB=0.0695971;ABP=442.276;AC=0;AF=0;AN=12;AO=19;CIGAR=1M3I3M1X;DP=533;DPB=769.4;DPRA=3.68919;EPP=44.2683;EPPR=304.845;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=722;QR=5339;RO=139;RPL=0;RPP=44.2683;RPPR=304.845;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=139;SRP=304.845;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:124:14,9,101:14:540:9,101:343,3742:-301.918,-277.997,-319.635,0,-16.2163,-13.9444 0|0:95:57,0,38:57:2194:0,38:0,1394:-97.1463,-114.305,-294.459,0,-180.527,-169.088 0|0:149:39,10,100:39:1491:10,100:379,3701:-291.004,-271.672,-391.008,0,-91.275,-92.2424 0|0:83:25,0,58:25:959:0,58:0,2112:-165.332,-172.858,-251.578,0,-79.0979,-61.6382 0|0:45:4,0,41:4:155:0,41:0,1522:-123.708,-124.913,-137.648,0,-13.1213,-0.77909 0|0:37:0,0,37:0:0:0,37:0,1358:-122.507,-122.507,-122.507,-11.1381,-11.1381,0 dDocent_Contig_13662 11 . A G 2904.79 . AB=0.425;ABP=14.7363;AC=6;AF=0.5;AN=12;AO=102;CIGAR=1X;DP=240;DPB=240;DPRA=0;EPP=224.5;EPPR=302.673;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.637255;PAIREDR=0.565217;PAO=0;PQA=0;PQR=0;PRO=0;QA=4133;QR=5376;RO=138;RPL=0;RPP=224.5;RPPR=302.673;RPR=102;RUN=1;SAF=102;SAP=224.5;SAR=0;SRF=138;SRP=302.673;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:29:23,6:23:892:6:246:-13.7902,0,-71.8629 0/1:51:28,23:28:1086:23:929:-68.5603,0,-82.6751 0/1:27:24,3:24:929:3:122:-3.24468,0,-75.7883 0/1:44:23,21:23:904:21:849:-63.4755,0,-68.4253 0/1:25:15,10:15:592:10:402:-29.0132,0,-46.0955 0/1:64:25,39:25:973:39:1585:-123.613,0,-68.6071 dDocent_Contig_13663 39 . A G 2570.22 . AB=0;ABP=0;AC=3;AF=0.375;AN=8;AO=62;CIGAR=4M1X;DP=194;DPB=190.2;DPRA=1.54023;EPP=137.642;EPPR=248.387;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2459;QR=4421;RO=113;RPL=0;RPP=137.642;RPPR=248.387;RPR=62;RUN=1;SAF=62;SAP=137.642;SAR=0;SRF=113;SRP=248.387;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:40:21,19,0:21:804:19,0:742,0:-55.066,0,-60.6379,-61.3876,-66.3574,-127.358 1|1:67:5,0,62:5:197:0,62:0,2459:-203.354,-204.859,-221.067,-2.06261,-18.6639,0 0|0:25:25,0,0:25:997:0,0:0,0:0,-7.52575,-90.0317,-7.52575,-90.0317,-90.0317 0|0:62:62,0,0:62:2423:0,0:0,0:0,-18.6639,-218.254,-18.6639,-218.254,-218.254 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_13664 19 . A T 44.0896 . AB=0.122449;ABP=63.6786;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=200;DPB=200;DPRA=0.666667;EPP=20.3821;EPPR=394.282;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.75;PAIREDR=0.734375;PAO=0;PQA=0;PQR=0;PRO=0;QA=307;QR=7627;RO=192;RPL=0;RPP=20.3821;RPPR=419.933;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=189;SRP=394.282;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:38,0:38:1482:0:0:0,-11.4391,-133.62 0/1:36:32,4:32:1277:4:158:-3.76228,0,-104.362 0/1:13:11,2:11:442:2:82:-3.86629,0,-36.2226 0/0:31:29,2:29:1148:2:67:0,-2.96909,-97.2384 0/0:37:37,0:37:1461:0:0:0,-11.1381,-131.731 0/0:45:45,0:45:1817:0:0:0,-13.5463,-163.735 dDocent_Contig_13665 11 . A C 212.168 . AB=0.13913;ABP=133.091;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=303;DPB=303;DPRA=1.2234;EPP=37.7539;EPPR=624.051;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=648;QR=11284;RO=286;RPL=0;RPP=37.7539;RPPR=624.051;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=286;SRP=624.051;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:37,0:37:1459:0:0:0,-11.1381,-131.562 0/1:51:43,8:43:1716:8:326:-14.3573,0,-139.313 0/0:29:28,0:28:1113:0:0:0,-8.42884,-100.336 0/1:64:56,8:56:2204:8:322:-10.0813,0,-179.267 0/0:66:66,0:66:2610:0:0:0,-19.868,-235.038 0/0:56:56,0:56:2182:0:0:0,-16.8577,-196.56 dDocent_Contig_13666 1 . N G 69.3179 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=73;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:73:-6.9307,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13667 23 . A T 765.124 . AB=0.239437;ABP=86.7496;AC=6;AF=0.5;AN=12;AO=35;CIGAR=1X;DP=200;DPB=200;DPRA=0.501754;EPP=79.0118;EPPR=361.303;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9818;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.963636;PAO=0;PQA=0;PQR=0;PRO=0;QA=1381;QR=6471;RO=165;RPL=0;RPP=79.0118;RPPR=361.303;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=165;SRP=361.303;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:73:63,10:63:2477:10:377:-12.3019,0,-201.101 0/0:57:57,0:57:2285:0:0:0,-17.1587,-205.813 0/1:57:36,21:36:1350:21:846:-59.2931,0,-104.595 0/1:4:2,2:2:80:2:76:-6.01055,0,-6.38745 1/1:1:0,1:0:0:1:41:-4.09457,-0.30103,0 0/1:8:7,1:7:279:1:41:-1.68633,0,-23.0725 dDocent_Contig_13668 106 . N C 287.878 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=9;CIGAR=2X;DP=9;DPB=9.5;DPRA=0;EPP=22.5536;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=309;QR=0;RO=0;RPL=0;RPP=22.5536;RPPR=0;RPR=9;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:5:0,5:0:0:5:172:-15.8185,-1.50515,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:4:0,4:0:0:4:137:-12.6681,-1.20412,0 dDocent_Contig_13671 18 . T G 97.8617 . AB=0.145455;ABP=63.0614;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=209;DPB=209;DPRA=2.17949;EPP=33.4109;EPPR=426.447;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.857143;PAIREDR=0.887179;PAO=0;PQA=0;PQR=0;PRO=0;QA=507;QR=7302;RO=195;RPL=0;RPP=33.4109;RPPR=426.447;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=195;SRP=426.447;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:20,5:20:748:5:201:-10.9448,0,-60.1164 0/1:30:27,3:27:1028:3:118:-1.97199,0,-83.7915 0/0:29:29,0:29:1112:0:0:0,-8.72987,-100.376 0/0:56:51,5:51:1922:5:178:0,-0.493881,-156.857 0/0:10:10,0:10:354:0:0:0,-3.0103,-32.1892 0/0:59:58,1:58:2138:1:10:0,-16.7608,-191.645 dDocent_Contig_13672 8 . A G 2479.07 . AB=0.287234;ABP=39.9715;AC=6;AF=0.5;AN=12;AO=80;CIGAR=1X;DP=201;DPB=201;DPRA=1.36111;EPP=176.728;EPPR=265.758;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.975;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3080;QR=4638;RO=121;RPL=0;RPP=176.728;RPPR=265.758;RPR=80;RUN=1;SAF=80;SAP=176.728;SAR=0;SRF=121;SRP=265.758;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:32,0:32:1228:0:0:0,-9.63296,-110.814 0/1:55:50,5:50:1914:5:192:-1.09336,0,-155.947 0/0:22:22,0:22:846:0:0:0,-6.62266,-76.4632 0/1:39:17,22:17:650:22:844:-64.5428,0,-47.0948 1/1:3:0,3:0:0:3:115:-10.7249,-0.90309,0 1/1:50:0,50:0:0:50:1929:-173.852,-15.0515,0 dDocent_Contig_13673 108 . T G 1697.67 . AB=0.174312;ABP=705.99;AC=3;AF=0.3;AN=10;AO=164;CIGAR=1X;DP=1172;DPB=1172;DPRA=0;EPP=359.132;EPPR=2189.68;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5465;QR=29830;RO=1007;RPL=0;RPP=359.132;RPPR=2189.68;RPR=164;RUN=1;SAF=0;SAP=359.132;SAR=164;SRF=0;SRP=2189.68;SRR=1007;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:384:333,50:333:9953:50:1696:-37.5561,0,-780.518 0/1:359:289,70:289:8630:70:2341:-102.883,0,-668.762 0/0:222:206,16:206:5927:16:489:0,-22.5277,-489.317 0/0:187:172,15:172:5107:15:491:0,-11.7913,-415.329 ./.:.:.:.:.:.:.:. 0/1:20:7,13:7:213:13:448:-34.6295,0,-13.4502 dDocent_Contig_13674 33 . A G 3246.63 . AB=0.291028;ABP=176.353;AC=6;AF=0.5;AN=12;AO=133;CIGAR=1X;DP=457;DPB=457;DPRA=0;EPP=291.816;EPPR=706.567;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.789474;PAIREDR=0.762346;PAO=0;PQA=0;PQR=0;PRO=0;QA=5240;QR=12874;RO=324;RPL=0;RPP=291.816;RPPR=706.567;RPR=133;RUN=1;SAF=133;SAP=291.816;SAR=0;SRF=324;SRP=706.567;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:46:21,25:21:801:25:992:-75.7311,0,-58.5486 0/1:94:66,28:66:2625:28:1094:-70.4513,0,-208.084 0/1:65:50,15:50:2019:15:596:-34.4112,0,-162.326 0/1:57:26,31:26:1043:31:1224:-93.2764,0,-77.0027 0/1:121:101,20:101:4030:20:790:-34.9907,0,-326.259 0/1:74:60,14:60:2356:14:544:-27.024,0,-189.925 dDocent_Contig_13676 24 . T C 5207.65 . AB=0.674897;ABP=67.5736;AC=6;AF=0.5;AN=12;AO=167;CIGAR=1X;DP=247;DPB=247;DPRA=49.2;EPP=365.646;EPPR=176.728;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6665;QR=3187;RO=80;RPL=0;RPP=365.646;RPPR=176.728;RPR=167;RUN=1;SAF=167;SAP=365.646;SAR=0;SRF=80;SRP=176.728;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:64:33,31:33:1313:31:1231:-91.7922,0,-99.1681 0/1:47:8,39:8:320:39:1540:-124.683,0,-15.0193 0/1:43:23,20:23:914:20:807:-59.9992,0,-69.6234 0/1:89:15,74:15:599:74:2965:-240.14,0,-27.4566 0/0:1:1,0:1:41:0:0:0,-0.30103,-4.09457 1/1:3:0,3:0:0:3:122:-11.3725,-0.90309,0 dDocent_Contig_13677 23 . G A 40.689 . AB=0.142857;ABP=34.0313;AC=2;AF=0.166667;AN=12;AO=4;CIGAR=1X;DP=79;DPB=79;DPRA=1.09804;EPP=11.6962;EPPR=157.301;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.986667;PAO=0;PQA=0;PQR=0;PRO=0;QA=159;QR=2998;RO=75;RPL=0;RPP=11.6962;RPPR=165.871;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=74;SRP=157.301;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:10:9,1:9:358:1:41:-1.08427,0,-29.5711 0/1:18:15,3:15:602:3:118:-5.58304,0,-49.097 0/0:12:12,0:12:484:0:0:0,-3.61236,-43.9103 0/0:13:13,0:13:528:0:0:0,-3.91339,-47.8669 0/0:17:17,0:17:666:0:0:0,-5.11751,-60.2643 0/0:9:9,0:9:360:0:0:0,-2.70927,-32.7616 dDocent_Contig_13678 116 . G A 3022.29 . AB=0.521327;ABP=3.8439;AC=6;AF=0.5;AN=12;AO=110;CIGAR=2X;DP=211;DPB=211;DPRA=0;EPP=216.525;EPPR=163.699;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=0.818182;PAIREDR=0.689189;PAO=0;PQA=0;PQR=0;PRO=0;QA=3829;QR=2581;RO=74;RPL=107;RPP=216.525;RPPR=163.699;RPR=3;RUN=1;SAF=0;SAP=241.872;SAR=110;SRF=0;SRP=163.699;SRR=74;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:25:8,16,0:8:285:16,0:542,0:-41.6479,0,-18.5348,-44.0561,-23.3513,-67.2943 0|1:30:23,7,0:23:813:7,0:238,0:-12.7198,0,-64.4594,-19.6435,-66.5667,-85.8671 0|1:38:19,16,2:19:675:16,2:569,74:-40.6986,0,-50.2377,-40.3613,-48.9979,-94.7691 1|0:30:5,11,14:5:172:11,14:382,468:-53.458,-23.9065,-34.5665,-17.0853,0,-26.8387 0|1:44:8,31,5:8:251:31,5:1048,172:-82.5285,0,-10.8226,-70.9683,-6.17528,-89.6313 0|1:44:11,29,4:11:385:29,4:1050,148:-82.3984,0,-22.5797,-73.6007,-19.1962,-103.717 dDocent_Contig_13679 11 . G A 6250.59 . AB=0.212581;ABP=333.795;AC=2;AF=0.166667;AN=12;AO=98;CIGAR=1X3M2X1M1X;DP=461;DPB=461;DPRA=0;EPP=215.815;EPPR=202.786;GTI=0;LEN=1;MEANALT=4.83333;MQM=27.2041;MQMR=60;NS=6;NUMALT=6;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3879;QR=3512;RO=92;RPL=0;RPP=215.815;RPPR=202.786;RPR=98;RUN=1;SAF=98;SAP=215.815;SAR=0;SRF=92;SRP=202.786;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:32:10,0,10,0,4,0,7:10:377:0,10,0,4,0,7:0,404,0,163,0,271:-23.3713,-26.3816,-57.2816,0,-30.8881,-27.8778,-26.3816,-57.2816,-30.8881,-57.2816,-13.133,-44.0366,-17.6445,-44.0366,-42.8325,-26.3816,-57.2816,-30.8881,-57.2816,-44.0366,-57.2816,-4.10823,-35.0137,-8.62525,-35.0137,-21.7661,-35.0137,-32.9065 0|0:51:16,3,2,1,5,3,20:16:618:3,2,1,5,3,20:122,80,37,198,111,768:-58.228,-52.9981,-102.854,-56.4699,-97.1827,-106.626,-60.0178,-100.73,-104.202,-110.475,-46.7898,-87.5029,-90.9744,-94.522,-96.0436,-53.9653,-94.6775,-98.1489,-101.696,-88.4693,-103.82,0,-40.7128,-44.1847,-47.7328,-34.5046,-41.6805,-44.7387 0|0:52:27,0,9,0,0,3,12:27:1031:0,9,0,0,3,12:0,359,0,0,115,420:-26.0176,-34.1454,-118.739,-4.63694,-89.2413,-86.532,-34.1454,-118.739,-89.2413,-118.739,-34.1454,-118.739,-89.2413,-118.739,-118.739,-24.7049,-109.3,-79.8016,-109.3,-109.3,-108.397,0,-84.5821,-55.0847,-84.5821,-84.5821,-75.1434,-80.9698 0|0:69:27,0,10,0,5,0,27:27:1029:0,10,0,5,0,27:0,398,0,198,0,1037:-76.9899,-85.1177,-169.525,-52.4226,-136.831,-133.821,-85.1177,-169.525,-136.831,-169.525,-68.893,-153.301,-120.606,-153.301,-151.796,-85.1177,-169.525,-136.831,-169.525,-153.301,-169.525,0,-84.4008,-51.7052,-84.4008,-68.1758,-84.4008,-76.273 0|0:108:8,0,20,7,7,0,63:8:301:0,20,7,7,0,63:0,791,271,279,0,2414:-195.788,-198.196,-222.86,-177.381,-202.042,-196.021,-175.932,-200.597,-179.781,-198.489,-175.761,-200.426,-179.61,-178.162,-198.319,-198.196,-222.86,-202.042,-200.597,-200.426,-222.86,0,-24.682,-3.92458,-2.40231,-2.2312,-24.682,-5.71709 1|0:149:4,37,47,6,6,0,48:4:156:37,47,6,6,0,48:1467,1847,238,240,0,1819:-255.885,-136.372,-138.061,-204.078,-96.2058,-202.753,-240.357,-132.465,-200.173,-251.376,-237.408,-129.515,-197.223,-233.501,-248.427,-257.09,-149.199,-216.902,-253.183,-250.233,-269.915,-107.927,0,-67.7766,-104.02,-101.07,-120.755,-106.306 dDocent_Contig_13680 10 . C T 3121.21 . AB=0.35241;ABP=65.826;AC=6;AF=0.5;AN=12;AO=117;CIGAR=1X;DP=332;DPB=332;DPRA=0;EPP=257.073;EPPR=469.877;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.521368;PAIREDR=0.469767;PAO=0;PQA=0;PQR=0;PRO=0;QA=4682;QR=8559;RO=215;RPL=0;RPP=257.073;RPPR=469.877;RPR=117;RUN=1;SAF=117;SAP=257.073;SAR=0;SRF=215;SRP=469.877;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:45:27,18:27:1066:18:702:-49.9546,0,-82.679 0/1:62:46,16:46:1839:16:645:-39.7204,0,-147.049 0/1:47:30,17:30:1196:17:691:-48.3704,0,-93.7672 0/1:69:49,20:49:1964:20:788:-50.4643,0,-156.178 0/1:46:29,17:29:1151:17:684:-48.0417,0,-90.0214 0/1:63:34,29:34:1343:29:1172:-86.7915,0,-102.162 dDocent_Contig_13681 11 . G A 39.4097 . AB=0.101449;ABP=98.2089;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=381;DPB=381;DPRA=6.30357;EPP=46.4397;EPPR=786.912;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=801;QR=14466;RO=361;RPL=0;RPP=46.4397;RPPR=786.912;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=361;SRP=786.912;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:69:62,7:62:2506:7:284:-5.16272,0,-204.894 0/0:89:82,7:82:3275:7:281:0,-1.1306,-269.155 0/0:120:119,1:119:4761:1:32:0,-32.9243,-425.188 0/0:75:70,5:70:2794:5:204:0,-3.83322,-232.824 0/0:15:15,0:15:608:0:0:0,-4.51545,-55.0579 0/0:13:13,0:13:522:0:0:0,-3.91339,-47.3258 dDocent_Contig_13682 89 . G A 286.032 . AB=0.357143;ABP=10.4553;AC=3;AF=0.3;AN=10;AO=15;CIGAR=1X;DP=60;DPB=60;DPRA=1.55556;EPP=35.5824;EPPR=100.727;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=506;QR=1413;RO=45;RPL=15;RPP=35.5824;RPPR=100.727;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=45;SRP=100.727;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:17:10,7:10:315:7:228:-15.7209,0,-23.5405 0/1:15:9,6:9:300:6:208:-14.5442,0,-22.8091 0/1:10:8,2:8:243:2:70:-3.6371,0,-19.1569 0/0:12:12,0:12:396:0:0:0,-3.61236,-35.9593 0/0:6:6,0:6:159:0:0:0,-1.80618,-14.5712 ./.:.:.:.:.:.:.:. dDocent_Contig_13683 17 . G A 893.367 . AB=0.576923;ABP=5.68288;AC=1;AF=0.125;AN=8;AO=33;CIGAR=1X;DP=223;DPB=223;DPRA=1.42391;EPP=74.6689;EPPR=415.59;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1296;QR=7431;RO=190;RPL=0;RPP=74.6689;RPPR=415.59;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=190;SRP=415.59;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:52:22,30:22:875:30:1179:-90.7347,0,-63.4078 0/0:35:35,0:35:1368:0:0:0,-10.536,-123.385 0/0:79:76,3:76:2975:3:117:0,-12.8712,-256.941 0/0:57:57,0:57:2213:0:0:0,-17.1587,-199.345 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13684 107 . N C 403.327 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=14;CIGAR=1X;DP=14;DPB=14;DPRA=0;EPP=33.4109;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=422;QR=0;RO=0;RPL=0;RPP=33.4109;RPPR=0;RPR=14;RUN=1;SAF=0;SAP=33.4109;SAR=14;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:4:0,4:0:0:4:113:-10.4498,-1.20412,0 1/1:5:0,5:0:0:5:139:-12.7845,-1.50515,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:65:-6.17345,-0.60206,0 dDocent_Contig_13685 26 . A T 186.341 . AB=0.307692;ABP=11.3621;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=64;DPB=64;DPRA=1.36842;EPP=20.3821;EPPR=124.613;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.964286;PAO=0;PQA=0;PQR=0;PRO=0;QA=310;QR=2124;RO=56;RPL=0;RPP=20.3821;RPPR=124.613;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=56;SRP=124.613;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:9,7:9:338:7:270:-19.8486,0,-25.9579 0/1:10:9,1:9:341:1:40:-0.985379,0,-28.0355 0/0:9:9,0:9:345:0:0:0,-2.70927,-31.4076 0/0:5:5,0:5:185:0:0:0,-1.50515,-17.0085 0/0:23:23,0:23:879:0:0:0,-6.92369,-79.4289 0/0:1:1,0:1:36:0:0:0,-0.30103,-3.59827 dDocent_Contig_13686 35 . A T 514.905 . AB=0.170588;ABP=163.239;AC=2;AF=0.166667;AN=12;AO=46;CIGAR=1X;DP=572;DPB=572;DPRA=0;EPP=102.898;EPPR=1145.2;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.956522;PAIREDR=0.923954;PAO=0;PQA=0;PQR=0;PRO=0;QA=1848;QR=20777;RO=526;RPL=0;RPP=102.898;RPPR=1145.2;RPR=46;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=526;SRP=1145.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:72:68,4:68:2711:4:155:0,-7.35151,-229.786 0/0:136:130,6:130:5165:6:246:0,-18.42,-442.206 0/1:91:79,12:79:3086:12:489:-16.967,0,-250.428 0/0:78:73,5:73:2872:5:196:0,-5.4681,-240.583 0/0:116:114,2:114:4495:2:82:0,-27.1398,-396.719 0/1:79:62,17:62:2448:17:680:-37.7453,0,-196.683 dDocent_Contig_13687 48 . C T 256.878 . AB=0.25;ABP=22.5536;AC=7;AF=0.583333;AN=12;AO=14;CIGAR=1X;DP=64;DPB=64;DPRA=0;EPP=33.4109;EPPR=111.584;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=479;QR=2000;RO=50;RPL=0;RPP=33.4109;RPPR=111.584;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=50;SRP=111.584;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:7:5,2:5:204:2:72:-4.7287,0,-16.6368 0/0:24:23,1:23:921:1:33:0,-3.92558,-79.8938 0/1:9:7,2:7:278:2:61:-3.08356,0,-22.6806 0/1:20:15,5:15:597:5:181:-10.6226,0,-48.0465 1/1:3:0,3:0:0:3:109:-10.168,-0.90309,0 1/1:1:0,1:0:0:1:23:-2.29991,-0.30103,0 dDocent_Contig_13688 8 . A G 3552.36 . AB=0.529412;ABP=4.79857;AC=6;AF=0.5;AN=12;AO=126;CIGAR=1X1M;DP=238;DPB=238;DPRA=0;EPP=276.616;EPPR=222.329;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.825397;PAIREDR=0.920792;PAO=0;PQA=0;PQR=0;PRO=0;QA=4826;QR=3841;RO=101;RPL=0;RPP=276.616;RPPR=222.329;RPR=126;RUN=1;SAF=126;SAP=276.616;SAR=0;SRF=101;SRP=222.329;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:34:14,5,14:14:533:5,14:177,544:-40.5089,-30.3168,-72.5263,0,-29.3246,-39.5186 0|1:61:33,1,27:33:1256:1,27:37,1020:-73.6742,-80.5815,-183.303,0,-100.005,-94.9035 0|1:44:19,0,25:19:733:0,25:0,962:-73.6473,-79.3669,-139.564,0,-60.5817,-53.056 0|1:41:19,2,20:19:727:2,20:76,775:-57.9572,-57.4445,-116.499,0,-53.4283,-53.6405 0|1:32:4,2,26:4:144:2,26:76,985:-79.5506,-74.5217,-85.6641,0,-5.49413,-3.9069 0|1:26:12,0,14:12:448:0,14:0,540:-41.1183,-44.7307,-81.4023,0,-37.0504,-32.8359 dDocent_Contig_13689 12 . T C 408.984 . AB=0.235294;ABP=13.3567;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X3M1X;DP=163;DPB=163;DPRA=0.377778;EPP=11.6962;EPPR=302.673;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=160;QR=5469;RO=138;RPL=0;RPP=11.6962;RPPR=302.673;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=138;SRP=302.673;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:15:10,0,5:10:397:0,5:0,204:-14.2286,-17.2389,-49.9132,0,-33.0782,-31.573 0|0:25:19,0,6:19:762:0,6:0,245:-14.9037,-20.6233,-83.4014,0,-63.1842,-61.378 0|0:63:57,0,5:57:2270:0,5:0,203:0,-17.1587,-204.102,-0.236718,-187.359,-185.854 0|0:16:12,0,4:12:481:0,4:0,153:-9.32147,-12.9338,-52.5762,0,-40.0291,-38.825 0|0:27:27,0,0:27:1047:0,0:0,0:0,-8.12781,-94.5211,-8.12781,-94.5211,-94.5211 0|1:17:13,4,0:13:512:4,0:160,0:-9.66608,0,-41.3087,-13.5795,-42.5128,-55.6942 dDocent_Contig_13690 38 . A T 35.6114 . AB=0.125;ABP=42.0968;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=157;DPB=157;DPRA=1.28;EPP=11.6962;EPPR=335.246;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=0;PAIREDR=0.588235;PAO=0;PQA=0;PQR=0;PRO=0;QA=156;QR=6107;RO=153;RPL=0;RPP=11.6962;RPPR=335.246;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=153;SRP=335.246;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:28,4:28:1108:4:156:-4.78287,0,-90.3759 0/0:34:34,0:34:1359:0:0:0,-10.235,-122.57 0/0:22:22,0:22:887:0:0:0,-6.62266,-80.1368 0/0:33:33,0:33:1313:0:0:0,-9.93399,-118.434 0/0:12:12,0:12:472:0:0:0,-3.61236,-42.8254 0/0:24:24,0:24:968:0:0:0,-7.22472,-87.4204 dDocent_Contig_13691 110 . A C 69.7784 . AB=0.181818;ABP=22.3561;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X2M1X;DP=115;DPB=115;DPRA=0.977778;EPP=11.6962;EPPR=231.015;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=3.46945e-18;PAIRED=0;PAIREDR=0.990476;PAO=0;PQA=0;PQR=0;PRO=0;QA=120;QR=3529;RO=105;RPL=0;RPP=11.6962;RPPR=231.015;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=231.015;SRR=105;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:25:23,0,2:23:789:0,2:0,67:0,-6.92369,-70.9922,-1.1627,-65.5668,-64.9647 0|0:20:20,0,0:20:669:0,0:0,0:0,-6.0206,-60.5251,-6.0206,-60.5251,-60.5251 0|1:22:17,4,1:17:573:4,1:120,32:-4.45983,0,-45.2482,-6.99499,-43.8749,-53.1601 0|0:44:43,0,1:43:1430:0,1:0,32:0,-12.9443,-128.67,-10.046,-126.092,-125.791 0|0:1:0,0,1:0:0:0,1:0,35:-3.49863,-3.49863,-3.49863,-0.30103,-0.30103,0 0|0:3:2,0,1:2:68:0,1:0,31:-2.19636,-2.79842,-8.33437,0,-5.85587,-5.55484 dDocent_Contig_13692 12 . G A 4296.87 . AB=0.0647773;ABP=1222.16;AC=0;AF=0;AN=12;AO=48;CIGAR=1X3M3D6M;DP=741;DPB=727;DPRA=0;EPP=107.241;EPPR=880.285;GTI=0;LEN=1;MEANALT=6;MQM=45.9167;MQMR=59.7822;NS=6;NUMALT=4;ODDS=0;PAIRED=0.979167;PAIREDR=0.920792;PAO=0;PQA=0;PQR=0;PRO=0;QA=1859;QR=15988;RO=404;RPL=0;RPP=107.241;RPPR=880.285;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=404;SRP=880.285;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:137:70,17,7,10,25:70:2765:17,7,10,25:462,273,390,1005:-61.4562,-48.4028,-270.777,-60.6666,-254.037,-286.07,-50.4661,-243.839,-256.12,-274.968,0,-193.393,-205.672,-195.473,-220.005 0|0:128:67,19,6,0,32:67:2641:19,6,0,32:368,197,0,1292:-86.2249,-82.2625,-293.726,-91.0709,-284.126,-306.484,-106.394,-299.446,-308.29,-323.612,0,-193.135,-201.969,-217.291,-207.658 0|0:119:59,13,9,0,37:59:2346:13,9,0,37:499,359,0,1484:-104.287,-81.9162,-271.16,-93.2757,-246.301,-283.725,-122.048,-275.073,-286.435,-315.207,0,-153.036,-164.396,-193.169,-182.031 0|0:150:65,16,18,5,37:65:2567:16,18,5,37:445,725,199,1489:-102.875,-89.215,-295.569,-64.3015,-242.251,-270.069,-106.055,-284,-259.101,-315.732,0,-177.965,-153.06,-194.812,-200.061 0|0:98:70,2,4,0,15:70:2781:2,4,0,15:80,151,0,603:-28.4805,-43.0689,-271.429,-37.3587,-259.836,-265.115,-49.5526,-272.031,-266.319,-278.514,0,-222.497,-216.785,-228.98,-224.464 0|0:109:73,2,4,0,24:73:2888:2,4,0,24:81,154,0,970:-57.5848,-73.0002,-310.072,-67.0702,-298.183,-303.539,-79.5599,-310.674,-304.743,-317.233,0,-231.132,-225.201,-237.692,-230.467 dDocent_Contig_13693 1 . N G 92.3781 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X3M;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=36;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=108;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:3:0,3:0:0:3:108:-9.23727,-0.90309,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_13694 27 . A G 1183.97 . AB=0.212766;ABP=205.096;AC=6;AF=0.5;AN=12;AO=60;CIGAR=1X;DP=282;DPB=282;DPRA=0;EPP=133.299;EPPR=485.077;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.6;PAIREDR=0.621622;PAO=0;PQA=0;PQR=0;PRO=0;QA=2360;QR=8890;RO=222;RPL=0;RPP=133.299;RPPR=485.077;RPR=60;RUN=1;SAF=60;SAP=133.299;SAR=0;SRF=222;SRP=485.077;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:42:37,5:37:1476:5:181:-3.99264,0,-120.445 0/1:57:42,15:42:1670:15:597:-36.9086,0,-133.371 0/1:22:18,4:18:734:4:158:-7.97731,0,-59.7606 0/1:50:43,7:43:1727:7:287:-11.1537,0,-140.6 0/1:49:35,14:35:1406:14:539:-34.0952,0,-112.045 0/1:62:47,15:47:1877:15:598:-35.4911,0,-150.474 dDocent_Contig_13695 86 . T C 2474.41 . AB=0.451064;ABP=7.89842;AC=2;AF=0.166667;AN=12;AO=107;CIGAR=1X;DP=744;DPB=744;DPRA=0.978723;EPP=235.358;EPPR=1386.24;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.993721;PAO=0;PQA=0;PQR=0;PRO=0;QA=3572;QR=22570;RO=637;RPL=107;RPP=235.358;RPPR=1386.24;RPR=0;RUN=1;SAF=107;SAP=235.358;SAR=0;SRF=637;SRP=1386.24;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:151:151,0:151:5251:0:0:0,-45.4555,-472.73 0/0:107:107,0:107:3673:0:0:0,-32.2102,-330.772 0/0:118:118,0:118:4295:0:0:0,-35.5215,-386.653 0/0:133:132,1:132:4757:1:7:0,-39.337,-427.511 0/1:112:53,59:53:1874:59:1981:-144.845,0,-135.198 0/1:123:76,47:76:2720:47:1584:-105.818,0,-207.972 dDocent_Contig_13696 41 . A T 4105.41 . AB=0.339806;ABP=48.9275;AC=2;AF=0.166667;AN=12;AO=70;CIGAR=3X;DP=269;DPB=269;DPRA=1.56061;EPP=155.013;EPPR=239.701;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2786;QR=4289;RO=109;RPL=70;RPP=155.013;RPPR=239.701;RPR=0;RUN=1;SAF=70;SAP=155.013;SAR=0;SRF=109;SRP=239.701;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:30:23,0,7:23:909:0,7:0,273:-15.902,-22.8256,-97.6307,0,-75.1959,-73.0887 0|0:33:31,0,2:31:1219:0,2:0,80:0,-9.33193,-109.593,-2.34241,-103.003,-102.401 0|0:42:29,2,11:29:1134:2,11:81,446:-28.0504,-30.1012,-122.717,0,-86.5354,-89.9042 0|0:48:11,2,35:11:431:2,35:82,1386:-110.744,-107.286,-142.124,0,-28.6541,-24.889 1|0:69:8,41,19:8:317:41,19:1629,756:-167.857,-36.1555,-49.9056,-108.018,0,-128.391 1|0:47:7,25,14:7:279:25,14:994,497:-97.2096,-17.4557,-32.9181,-58.86,0,-77.6211 dDocent_Contig_13697 59 . T G 423.028 . AB=0.301887;ABP=21.0786;AC=3;AF=0.25;AN=12;AO=20;CIGAR=1X;DP=199;DPB=199;DPRA=0.802817;EPP=46.4397;EPPR=391.704;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=654;QR=6604;RO=179;RPL=20;RPP=46.4397;RPPR=391.704;RPR=0;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=179;SRP=391.704;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:263:0:0:0,-2.10721,-24.0288 0/0:54:54,0:54:1998:0:0:0,-16.2556,-180.062 0/0:17:17,0:17:667:0:0:0,-5.11751,-60.3577 0/0:64:64,0:64:2367:0:0:0,-19.2659,-213.252 1/1:4:0,4:0:0:4:124:-11.4663,-1.20412,0 0/1:53:37,16:37:1309:16:530:-32.0583,0,-102.145 dDocent_Contig_13698 45 . C A 125.548 . AB=0.160714;ABP=59.0033;AC=3;AF=0.25;AN=12;AO=9;CIGAR=1X;DP=129;DPB=129;DPRA=0.767123;EPP=22.5536;EPPR=263.587;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.777778;PAIREDR=0.691667;PAO=0;PQA=0;PQR=0;PRO=0;QA=355;QR=4805;RO=120;RPL=0;RPP=22.5536;RPPR=263.587;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=120;SRP=263.587;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:720:0:0:0,-5.41854,-65.1243 0/1:12:11,1:11:448:1:41:-0.482207,0,-37.0636 0/0:27:27,0:27:1084:0:0:0,-8.12781,-97.8474 0/0:28:28,0:28:1126:0:0:0,-8.42884,-101.624 0/1:11:8,3:8:326:3:121:-7.96887,0,-26.3985 0/1:33:28,5:28:1101:5:193:-7.80555,0,-89.443 dDocent_Contig_13699 24 . C T 121.131 . AB=0.153846;ABP=57.1301;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=363;DPB=363;DPRA=0.237805;EPP=26.8965;EPPR=763.026;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=450;QR=14003;RO=350;RPL=0;RPP=26.8965;RPPR=763.026;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=350;SRP=763.026;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:18:13,5:13:511:5:204:-13.3255,0,-40.9133 0/0:24:23,1:23:907:1:41:0,-3.13015,-77.8265 0/0:41:39,2:39:1575:2:82:0,-4.56255,-134.203 0/1:34:30,3:30:1173:3:123:-1.12134,0,-95.4951 0/0:167:166,0:166:6662:0:0:0,-49.971,-598.85 0/0:79:79,0:79:3175:0:0:0,-23.7814,-285.807 dDocent_Contig_13700 17 . A G 1590.97 . AB=0.350877;ABP=36.0395;AC=4;AF=0.333333;AN=12;AO=62;CIGAR=1X;DP=224;DPB=224;DPRA=11;EPP=137.642;EPPR=354.789;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993827;PAO=0;PQA=0;PQR=0;PRO=0;QA=2482;QR=6469;RO=162;RPL=0;RPP=137.642;RPPR=354.789;RPR=62;RUN=1;SAF=62;SAP=137.642;SAR=0;SRF=162;SRP=354.789;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:52:20,32:20:809:32:1293:-100.981,0,-57.4731 0/0:49:47,2:47:1865:2:77:0,-7.44164,-160.748 0/1:46:37,9:37:1460:9:360:-18.9164,0,-117.809 0/1:58:50,8:50:2013:8:324:-12.0691,0,-163.898 0/0:4:4,0:4:159:0:0:0,-1.20412,-14.6908 0/1:15:4,11:4:163:11:428:-34.3516,0,-10.543 dDocent_Contig_13701 41 . C G 169.407 . AB=0.195652;ABP=40.0197;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=326;DPB=326;DPRA=1.07547;EPP=24.725;EPPR=689.196;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.772152;PAO=0;PQA=0;PQR=0;PRO=0;QA=395;QR=12616;RO=316;RPL=0;RPP=24.725;RPPR=689.196;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=316;SRP=689.196;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1380:0:0:0,-10.536,-124.445 0/0:45:45,0:45:1807:0:0:0,-13.5463,-162.84 0/0:47:47,0:47:1900:0:0:0,-14.1484,-171.194 0/0:85:85,0:85:3387:0:0:0,-25.5875,-304.876 0/1:46:37,9:37:1483:9:355:-18.4635,0,-119.865 0/0:68:67,1:67:2659:1:40:0,-16.4744,-235.433 dDocent_Contig_13703 209 . N G 110.36 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=111;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:1:0,1:0:0:1:39:-3.89656,-0.30103,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:72:-6.83672,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13705 15 . G A 66.9247 . AB=0.115942;ABP=91.4113;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=442;DPB=442;DPRA=1.90476;EPP=33.4109;EPPR=932.4;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.985981;PAO=0;PQA=0;PQR=0;PRO=0;QA=559;QR=17080;RO=428;RPL=0;RPP=33.4109;RPPR=932.4;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=428;SRP=932.4;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:90:89,1:89:3526:1:40:0,-23.097,-313.393 0/0:82:81,1:81:3253:1:41:0,-20.5899,-288.734 0/1:69:61,8:61:2424:8:318:-8.21535,0,-197.54 0/0:97:95,2:95:3808:2:82:0,-21.4202,-334.944 0/0:42:42,0:42:1669:0:0:0,-12.6433,-150.438 0/0:62:60,2:60:2400:2:78:0,-11.2606,-208.749 dDocent_Contig_13706 11 . G A 73.382 . AB=0.1125;ABP=107.35;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=388;DPB=388;DPRA=1.2987;EPP=22.5536;EPPR=808.718;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9103;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.622691;PAO=0;PQA=0;PQR=0;PRO=0;QA=362;QR=14940;RO=379;RPL=0;RPP=22.5536;RPPR=825.998;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=377;SRP=808.718;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:59,0:59:2307:0:0:0,-17.7608,-207.792 0/0:80:80,0:80:3177:0:0:0,-24.0824,-286.001 0/0:61:61,0:61:2412:0:0:0,-18.3628,-215.959 0/1:80:71,9:71:2797:9:362:-8.86108,0,-227.773 0/0:50:50,0:50:1985:0:0:0,-15.0515,-178.851 0/0:58:58,0:58:2262:0:0:0,-17.4597,-203.75 dDocent_Contig_13708 27 . A G 38.6538 . AB=0.142857;ABP=34.0313;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=123;DPB=123;DPRA=1.47368;EPP=11.6962;EPPR=261.416;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=8.94118;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=163;QR=4615;RO=119;RPL=0;RPP=11.6962;RPPR=261.416;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=119;SRP=261.416;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:686:0:0:0,-5.11751,-10.7775 0/1:28:24,4:24:938:4:163:-5.3882,0,-9.09161 0/0:10:10,0:10:380:0:0:0,-3.0103,-8.99296 0/0:20:20,0:20:762:0:0:0,-6.0206,-16.3259 0/0:23:23,0:23:899:0:0:0,-6.92369,-14.5368 0/0:25:25,0:25:950:0:0:0,-7.52575,-23.4787 dDocent_Contig_13709 17 . G A 782.6 . AB=0.17561;ABP=190.382;AC=5;AF=0.416666;AN=12;AO=38;CIGAR=1X1M;DP=256;DPB=256;DPRA=0;EPP=85.5263;EPPR=454.677;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.394737;PAIREDR=0.586538;PAO=0;PQA=0;PQR=0;PRO=0;QA=1534;QR=8153;RO=208;RPL=0;RPP=85.5263;RPPR=454.677;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=208;SRP=454.677;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:51:49,0,2:49:1916:0,2:0,77:0,-14.7505,-172.261,-8.0437,-165.94,-165.337 0|1:63:49,9,5:49:1914:9,5:365,203:-15.3498,0,-154.607,-13.3579,-140.573,-169.17 0|1:40:29,0,11:29:1145:0,11:0,449:-28.7247,-37.4545,-131.658,0,-94.6077,-91.2963 0|1:56:44,0,12:44:1709:0,12:0,486:-27.2336,-40.4789,-180.875,0,-140.797,-137.185 0|1:14:8,0,5:8:321:0,5:0,201:-14.1572,-16.5655,-43.0145,0,-26.4503,-24.9452 0|1:32:29,0,3:29:1148:0,3:0,118:-1.36955,-10.0994,-104.58,0,-94.8734,-93.9703 dDocent_Contig_13710 14 . A T 1911.98 . AB=0;ABP=0;AC=4;AF=0.333333;AN=12;AO=54;CIGAR=1M2D1X3M1X2M3X;DP=295;DPB=286.692;DPRA=0.448133;EPP=120.27;EPPR=524.164;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=2.1684e-19;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2109;QR=9381;RO=240;RPL=0;RPP=120.27;RPPR=524.164;RPR=54;RUN=1;SAF=54;SAP=120.27;SAR=0;SRF=240;SRP=524.164;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:66:66,0:66:2577:0:0:0,-19.868,-232.101 0|0:16:16,0:16:627:0:0:0,-4.81648,-56.7677 0|0:53:53,0:53:2070:0:0:0,-15.9546,-186.511 0|0:106:105,0:105:4107:0:0:0,-31.6081,-369.506 1|1:1:0,1:0:0:1:40:-3.99568,-0.30103,0 1|1:53:0,53:0:0:53:2069:-186.424,-15.9546,0 dDocent_Contig_13713 25 . C T 1630.38 . AB=0.0740741;ABP=88.0998;AC=0;AF=0;AN=12;AO=4;CIGAR=4M1X2M1X;DP=366;DPB=368;DPRA=1.27059;EPP=11.6962;EPPR=619.708;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.933099;PAO=0;PQA=0;PQR=0;PRO=0;QA=149;QR=11244;RO=284;RPL=0;RPP=11.6962;RPPR=619.708;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=284;SRP=619.708;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:54:34,0,4,16:34:1337:0,4,16:0,149,641:-42.5952,-52.8303,-162.804,-40.6422,-150.612,-149.408,0,-109.994,-97.8021,-105.177 0|0:104:83,0,0,20:83:3302:0,0,20:0,0,793:-40.2819,-65.2674,-337.146,-65.2674,-337.146,-337.146,0,-271.876,-271.876,-265.855 0|0:52:38,0,0,14:38:1521:0,0,14:0,0,571:-36.0783,-47.5175,-172.812,-47.5175,-172.812,-172.812,0,-125.7,-125.7,-121.486 0|0:71:51,0,0,20:51:2008:0,0,20:0,0,804:-51.304,-66.6565,-231.833,-66.6565,-231.833,-231.833,0,-165.576,-165.576,-159.555 0|0:36:30,2,0,2:30:1195:2,0,2:72,0,80:0,-3.17038,-100.968,-9.0309,-101.57,-107.443,-2.43505,-94.9804,-100.853,-100.251 0|0:49:48,0,0,1:48:1881:0,0,1:0,0,37:0,-14.4494,-169.144,-14.4494,-169.144,-169.144,-11.0526,-166.117,-166.117,-165.816 dDocent_Contig_13714 19 . G A 605.866 . AB=0.6;ABP=6.05036;AC=2;AF=0.2;AN=10;AO=21;CIGAR=1X;DP=66;DPB=66;DPRA=1.69355;EPP=48.6112;EPPR=100.727;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=819;QR=1772;RO=45;RPL=0;RPP=48.6112;RPPR=100.727;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=45;SRP=100.727;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:11:11,0:11:433:0:0:0,-3.31133,-39.3252 0/1:4:2,2:2:78:2:79:-6.29351,0,-6.19918 0/0:10:10,0:10:391:0:0:0,-3.0103,-35.5473 0/1:31:12,19:12:476:19:740:-57.5941,0,-33.8592 ./.:.:.:.:.:.:.:. 0/0:10:10,0:10:394:0:0:0,-3.0103,-35.8183 dDocent_Contig_13715 16 . T C 511.401 . AB=0.842105;ABP=22.325;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=561;DPB=561;DPRA=0.677804;EPP=39.9253;EPPR=1184.29;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=686;QR=21596;RO=544;RPL=0;RPP=39.9253;RPPR=1184.29;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=544;SRP=1184.29;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:123:122,1:122:4861:1:41:0,-32.9321,-433.28 0/0:138:138,0:138:5485:0:0:0,-41.5421,-493.473 0/0:151:151,0:151:5959:0:0:0,-45.4555,-536.1 0/0:121:121,0:121:4813:0:0:0,-36.4246,-433.082 0/0:9:9,0:9:364:0:0:0,-2.70927,-33.125 0/1:19:3,16:3:114:16:645:-52.6629,0,-4.90965 dDocent_Contig_13716 64 . T G 566.896 . AB=0.0326087;ABP=177.578;AC=0;AF=0;AN=12;AO=3;CIGAR=1M3I9M5I1M1X;DP=267;DPB=325.25;DPRA=0.938776;EPP=9.52472;EPPR=341.76;GTI=0;LEN=1;MEANALT=10.5;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=49;QR=5609;RO=156;RPL=3;RPP=9.52472;RPPR=341.76;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=156;SRP=341.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:36:5,0,0,2,21,3:5:181:0,0,2,21,3:0,0,26,367,109:-25.1658,-26.6709,-41.4708,-26.6709,-41.4708,-41.4708,-24.9372,-39.7379,-39.7379,-39.1359,0,-14.8212,-14.8212,-13.1051,-8.4996,-17.7518,-32.5567,-32.5567,-30.8234,-5.89774,-31.6536 0|0:87:71,0,12,0,0,0:71:2576:0,12,0,0,0:0,264,0,0,0:0,-21.3731,-231.854,-1.1485,-211.726,-208.114,-21.3731,-231.854,-211.726,-231.854,-21.3731,-231.854,-211.726,-231.854,-231.854,-21.3731,-231.854,-211.726,-231.854,-231.854,-231.854 0|0:51:26,0,0,0,20,2:26:911:0,0,0,20,2:0,0,0,402,72:-22.2868,-30.1136,-104.308,-30.1136,-104.308,-104.308,-30.1136,-104.308,-104.308,-104.308,0,-74.2033,-74.2033,-74.2033,-68.1827,-24.2259,-98.4303,-98.4303,-98.4303,-68.3267,-97.8282 0|0:56:26,0,0,1,16,0:26:926:0,0,1,16,0:0,0,23,269,0:-11.5709,-19.3977,-94.9557,-19.3977,-94.9557,-94.9557,-17.6265,-93.1872,-93.1872,-92.8862,0,-75.597,-75.597,-73.8296,-70.7805,-19.3977,-94.9557,-94.9557,-93.1872,-75.597,-94.9557 0|0:11:11,0,0,0,0,0:11:402:0,0,0,0,0:0,0,0,0,0:0,-3.31133,-36.5252,-3.31133,-36.5252,-36.5252,-3.31133,-36.5252,-36.5252,-36.5252,-3.31133,-36.5252,-36.5252,-36.5252,-36.5252,-3.31133,-36.5252,-36.5252,-36.5252,-36.5252,-36.5252 0|0:26:17,4,0,0,0,0:17:613:4,0,0,0,0:124,0,0,0,0:-4.8878,0,-48.9495,-10.0053,-50.1536,-60.1046,-10.0053,-50.1536,-60.1046,-60.1046,-10.0053,-50.1536,-60.1046,-60.1046,-60.1046,-10.0053,-50.1536,-60.1046,-60.1046,-60.1046,-60.1046 dDocent_Contig_13718 12 . A G 4190.07 . AB=0.0561798;ABP=459.825;AC=0;AF=0;AN=12;AO=15;CIGAR=1M1X2M1X3M1X8M;DP=350;DPB=363.412;DPRA=0;EPP=35.5824;EPPR=198.443;GTI=0;LEN=1;MEANALT=8;MQM=60;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=0.533333;PAIREDR=0.944444;PAO=0;PQA=0;PQR=0;PRO=0;QA=596;QR=3530;RO=90;RPL=0;RPP=35.5824;RPPR=198.443;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=90;SRP=198.443;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:58:10,2,1,2,4,0,0,7,9,14:10:397:2,1,2,4,0,0,7,9,14:80,41,80,153,0,0,278,361,553:-42.5107,-38.9286,-71.0182,-42.1356,-68.2352,-74.5259,-38.9286,-65.0284,-68.2352,-71.0182,-32.9635,-59.0637,-62.2704,-59.0637,-64.4514,-45.521,-71.6202,-74.8269,-71.6202,-65.6555,-78.2119,-45.521,-71.6202,-74.8269,-71.6202,-65.6555,-78.2119,-78.2119,-22.626,-48.7276,-51.9344,-48.7276,-42.7626,-55.3197,-55.3197,-53.2125,-15.7682,-41.8708,-45.0777,-41.8708,-35.9056,-48.4631,-48.4631,-25.5683,-45.7538,0,-26.1051,-29.3122,-26.1051,-20.1396,-32.6978,-32.6978,-9.80125,-2.9427,-28.4834 0|0:43:5,1,0,4,0,0,0,0,13,14:5:192:1,0,4,0,0,0,0,13,14:41,0,160,0,0,0,0,517,569:-72.3109,-70.4303,-85.8923,-73.816,-86.1934,-89.5788,-60.6298,-73.0081,-76.3938,-75.1897,-73.816,-86.1934,-89.5788,-76.3938,-89.5788,-73.816,-86.1934,-89.5788,-76.3938,-89.5788,-89.5788,-73.816,-86.1934,-89.5788,-76.3938,-89.5788,-89.5788,-89.5788,-73.816,-86.1934,-89.5788,-76.3938,-89.5788,-89.5788,-89.5788,-89.5788,-31.2266,-43.6087,-46.9955,-33.8051,-46.9955,-46.9955,-46.9955,-46.9955,-43.0821,-26.8508,-39.2343,-42.6214,-29.4296,-42.6214,-42.6214,-42.6214,-42.6214,0,-38.407 0|0:47:17,5,4,0,1,0,1,5,4,4:17:663:5,4,0,1,0,1,5,4,4:195,161,0,41,0,40,195,131,164:-10.9207,-0.00116645,-53.0184,-2.75888,-41.2489,-56.0763,-16.0383,-54.5235,-57.2804,-70.554,-12.6517,-51.138,-53.895,-67.1688,-66.8678,-16.0383,-54.5235,-57.2804,-70.554,-67.1688,-70.554,-12.741,-51.2273,-53.9842,-67.258,-63.8727,-67.258,-66.957,0,-38.4907,-41.2477,-54.5224,-51.1369,-54.5224,-51.2261,-53.0172,-5.46672,-43.9531,-46.7099,-59.9837,-56.5984,-59.9837,-56.6877,-43.9519,-58.7796,-2.49074,-40.9811,-43.7382,-57.0127,-53.6273,-57.0127,-53.7165,-40.98,-46.4422,-55.8086 0|0:25:6,2,0,6,1,0,0,0,3,3:6:235:2,0,6,1,0,0,0,3,3:80,0,237,36,0,0,0,123,122:-17.7191,-12.9285,-31.6644,-19.5253,-32.2665,-38.8605,0,-12.7494,-19.3462,-17.54,-16.587,-29.3287,-35.9229,-16.4079,-35.6219,-19.5253,-32.2665,-38.8605,-19.3462,-35.9229,-38.8605,-19.5253,-32.2665,-38.8605,-19.3462,-35.9229,-38.8605,-38.8605,-19.5253,-32.2665,-38.8605,-19.3462,-35.9229,-38.8605,-38.8605,-38.8605,-9.36073,-22.1055,-28.7009,-9.18149,-25.7629,-28.7009,-28.7009,-28.7009,-27.7978,-9.45034,-22.195,-28.7903,-9.27111,-25.8524,-28.7903,-28.7903,-28.7903,-18.6284,-27.8872 0|0:94:23,5,0,0,0,6,12,0,0,47:23:912:5,0,0,0,6,12,0,0,47:200,0,0,0,240,469,0,0,1885:-148.394,-138.842,-212.409,-155.317,-213.914,-230.39,-155.317,-213.914,-230.39,-230.39,-155.317,-213.914,-230.39,-230.39,-230.39,-135.547,-194.144,-210.619,-210.619,-210.619,-208.813,-116.761,-175.358,-191.833,-191.833,-191.833,-172.063,-188.221,-155.317,-213.914,-230.39,-230.39,-230.39,-210.619,-191.833,-230.39,-155.317,-213.914,-230.39,-230.39,-230.39,-210.619,-191.833,-230.39,-230.39,0,-58.6022,-75.0783,-75.0783,-75.0783,-55.3065,-36.5208,-75.0783,-75.0783,-60.9299 0|0:83:29,0,0,0,0,0,0,0,8,45:29:1131:0,0,0,0,0,0,0,8,45:0,0,0,0,0,0,0,328,1786:-138.307,-147.037,-239.999,-147.037,-239.999,-239.999,-147.037,-239.999,-239.999,-239.999,-147.037,-239.999,-239.999,-239.999,-239.999,-147.037,-239.999,-239.999,-239.999,-239.999,-239.999,-147.037,-239.999,-239.999,-239.999,-239.999,-239.999,-239.999,-147.037,-239.999,-239.999,-239.999,-239.999,-239.999,-239.999,-239.999,-119.961,-212.925,-212.925,-212.925,-212.925,-212.925,-212.925,-212.925,-210.517,0,-92.9794,-92.9794,-92.9794,-92.9794,-92.9794,-92.9794,-92.9794,-65.9002,-79.4331 dDocent_Contig_13719 9 . T G 238.892 . AB=0.466667;ABP=3.15506;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X3M1X3M1X;DP=87;DPB=87;DPRA=1;EPP=18.2106;EPPR=163.699;GTI=0;LEN=1;MEANALT=2;MQM=30;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=270;QR=2922;RO=74;RPL=0;RPP=18.2106;RPPR=163.699;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=74;SRP=163.699;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:12:7,0,5:7:271:0,5:0,191:-12.8852,-14.9924,-37.2691,0,-22.6471,-21.1419 0|1:15:7,7,0:7:275:7,0:270,0:-14.2258,0,-20.5229,-16.333,-22.6301,-38.993 0|0:5:5,0,0:5:199:0,0:0,0:0,-1.50515,-18.2889,-1.50515,-18.2889,-18.2889 0|0:24:24,0,0:24:950:0,0:0,0:0,-7.22472,-85.8096,-7.22472,-85.8096,-85.8096 0|0:16:16,0,0:16:632:0,0:0,0:0,-4.81648,-57.218,-4.81648,-57.218,-57.218 0|0:15:15,0,0:15:595:0,0:0,0:0,-4.51545,-53.8919,-4.51545,-53.8919,-53.8919 dDocent_Contig_13720 79 . T C 524.227 . AB=0.309524;ABP=29.4816;AC=3;AF=0.375;AN=8;AO=26;CIGAR=11M1X8M;DP=95;DPB=94.75;DPRA=2.54545;EPP=59.4686;EPPR=131.127;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=4;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=886;QR=2139;RO=59;RPL=26;RPP=59.4686;RPPR=131.127;RPR=0;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=59;SRP=131.127;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:16:12,2,0,2:12:429:2,0,2:72,0,69:-2.26995,0,-34.3867,-5.88231,-34.9887,-40.8641,-0.284059,-29.3848,-35.26,-34.6579 0|1:36:15,3,0,18:15:544:3,0,18:108,0,607:-44.6583,-40.3582,-83.8862,-49.1737,-84.7893,-93.6025,0,-35.61,-44.4218,-39.0032 0|1:32:21,2,2,6:21:768:2,2,6:74,69,210:-10.7906,-11.0489,-73.2404,-11.5028,-68.2372,-73.6904,0,-56.7568,-57.2072,-61.006 0|0:11:11,0,0,0:11:398:0,0,0:0,0,0:0,-3.31133,-36.1628,-3.31133,-36.1628,-36.1628,-3.31133,-36.1628,-36.1628,-36.1628 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_13722 32 . T G 518.159 . AB=0.586207;ABP=4.88226;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=135;DPB=135;DPRA=1.36792;EPP=39.9253;EPPR=259.244;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=686;QR=4746;RO=118;RPL=0;RPP=39.9253;RPPR=259.244;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=118;SRP=259.244;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:492:0:0:0,-3.61236,-44.6308 0/0:17:17,0:17:680:0:0:0,-5.11751,-61.5287 0/0:28:28,0:28:1108:0:0:0,-8.42884,-100.001 0/0:34:34,0:34:1373:0:0:0,-10.235,-123.823 0/1:29:12,17:12:486:17:686:-53.3388,0,-35.3612 0/0:15:15,0:15:607:0:0:0,-4.51545,-54.9666 dDocent_Contig_13723 74 . A G 382.248 . AB=0.303571;ABP=21.778;AC=2;AF=0.25;AN=8;AO=17;CIGAR=1X;DP=93;DPB=93;DPRA=1.51351;EPP=39.9253;EPPR=168.042;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=642;QR=2933;RO=76;RPL=17;RPP=39.9253;RPPR=168.042;RPR=0;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=76;SRP=168.042;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:39:28,11:28:1090:11:422:-26.5864,0,-86.6527 0/0:17:17,0:17:637:0:0:0,-5.11751,-57.6552 0/1:17:11,6:11:422:6:220:-15.0363,0,-33.2101 0/0:20:20,0:20:784:0:0:0,-6.0206,-70.8778 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13724 35 . A T 210.452 . AB=0.241379;ABP=36.7056;AC=4;AF=0.333333;AN=12;AO=17;CIGAR=1X2M1X;DP=147;DPB=147;DPRA=0.535;EPP=3.13803;EPPR=14.302;GTI=0;LEN=1;MEANALT=1;MQM=52.2353;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.235294;PAIREDR=0.646154;PAO=0;PQA=0;PQR=0;PRO=0;QA=657;QR=4862;RO=130;RPL=10;RPP=4.1599;RPPR=285.302;RPR=7;RUN=1;SAF=9;SAP=3.13803;SAR=8;SRF=78;SRP=14.302;SRR=52;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:10:8,2:8:294:2:81:-4.67543,0,-23.7996 0|0:49:46,3:46:1732:3:116:0,-3.93348,-145.309 0|1:14:11,3:11:414:3:117:-4.4992,0,-33.3915 0|0:40:40,0:40:1465:0:0:0,-12.0412,-132.117 0|1:24:18,6:18:689:6:227:-13.5677,0,-55.1123 0|1:10:7,3:7:268:3:116:-5.52431,0,-21.471 dDocent_Contig_13725 120 . C G 282.561 . AB=0.22;ABP=37.059;AC=5;AF=0.5;AN=10;AO=16;CIGAR=1X;DP=76;DPB=76;DPRA=0.654762;EPP=37.7539;EPPR=133.299;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.983333;PAO=0;PQA=0;PQR=0;PRO=0;QA=505;QR=1983;RO=60;RPL=0;RPP=37.7539;RPPR=133.299;RPR=16;RUN=1;SAF=0;SAP=37.7539;SAR=16;SRF=0;SRP=133.299;SRR=60;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:702:0:0:0,-6.32163,-63.4943 0/1:17:10,7:10:348:7:214:-14.4411,0,-26.5385 0/1:12:10,2:10:288:2:70:-3.03504,0,-22.5887 0/1:21:19,2:19:645:2:68:-0.136246,0,-52.0473 1/1:5:0,5:0:0:5:153:-14.0718,-1.50515,0 ./.:.:.:.:.:.:.:. dDocent_Contig_13726 10 . A C 2232.1 . AB=0.169811;ABP=53.2;AC=0;AF=0;AN=12;AO=10;CIGAR=1X2M1D7M;DP=240;DPB=239.091;DPRA=0.833333;EPP=24.725;EPPR=320.045;GTI=0;LEN=1;MEANALT=2;MQM=38;MQMR=60;NS=6;NUMALT=3;ODDS=1.38778e-17;PAIRED=0;PAIREDR=0.979452;PAO=0;PQA=0;PQR=0;PRO=0;QA=380;QR=5754;RO=146;RPL=0;RPP=24.725;RPPR=320.045;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=146;SRP=320.045;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:12:11,1,0,0:11:423:1,0,0:38,0,0:0,-0.113355,-34.9213,-3.31133,-35.2223,-38.0675,-3.31133,-35.2223,-38.0675,-38.0675 0|0:54:42,0,12,0:42:1661:0,12,0:0,482,0:-27.4763,-40.1196,-176.808,0,-137.088,-133.476,-40.1196,-176.808,-137.088,-176.808 0|0:39:39,0,0,0:39:1546:0,0,0:0,0,0:0,-11.7402,-139.393,-11.7402,-139.393,-139.393,-11.7402,-139.393,-139.393,-139.393 0|0:63:27,0,35,0:27:1051:0,35,0:0,1376,0:-105.045,-113.173,-199.541,0,-86.3598,-75.8237,-113.173,-199.541,-86.3598,-199.541 0|0:19:3,0,0,16:3:117:0,0,16:0,0,641:-52.3055,-53.2086,-62.8241,-53.2086,-62.8241,-62.8241,0,-10.0068,-10.0068,-5.19034 0|0:53:24,9,4,16:24:956:9,4,16:342,154,641:-45.6047,-27.2114,-103.227,-40.1848,-93.2933,-117.713,0,-53.1272,-66.1044,-73.9321 dDocent_Contig_13727 40 . G T 39.7716 . AB=0.128205;ABP=49.8362;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=1X;DP=119;DPB=119;DPRA=1.58696;EPP=18.2106;EPPR=246.215;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.428571;PAIREDR=0.660714;PAO=0;PQA=0;PQR=0;PRO=0;QA=282;QR=4499;RO=112;RPL=0;RPP=18.2106;RPPR=246.215;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=112;SRP=246.215;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:926:0:0:0,-6.92369,-83.644 0/1:20:18,2:18:721:2:81:-1.66513,0,-59.1937 0/1:19:16,3:16:625:3:120:-5.46774,0,-50.8547 0/0:34:32,2:32:1300:2:81:0,-2.54929,-109.575 0/0:10:10,0:10:398:0:0:0,-3.0103,-36.1766 0/0:13:13,0:13:529:0:0:0,-3.91339,-47.9569 dDocent_Contig_13728 15 . C T 539.188 . AB=0.186667;ABP=130.925;AC=2;AF=0.166667;AN=12;AO=30;CIGAR=1X;DP=363;DPB=363;DPRA=1.29747;EPP=68.1545;EPPR=726.111;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.990991;PAO=0;PQA=0;PQR=0;PRO=0;QA=1209;QR=13226;RO=333;RPL=0;RPP=68.1545;RPPR=726.111;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=333;SRP=726.111;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:62:62,0:62:2486:0:0:0,-18.6639,-223.889 0/0:68:68,0:68:2666:0:0:0,-20.47,-240.084 0/0:28:28,0:28:1099:0:0:0,-8.42884,-99.1943 0/0:55:53,2:53:2102:2:80:0,-8.96507,-181.777 0/1:78:67,11:67:2689:11:448:-17.1954,0,-218.653 0/1:72:55,17:55:2184:17:681:-39.9452,0,-175.062 dDocent_Contig_13729 36 . G A 115.809 . AB=0.157895;ABP=60.9543;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=143;DPB=143;DPRA=1.32558;EPP=22.5536;EPPR=293.988;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.777778;PAIREDR=0.992537;PAO=0;PQA=0;PQR=0;PRO=0;QA=347;QR=5244;RO=134;RPL=0;RPP=22.5536;RPPR=293.988;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=134;SRP=293.988;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:13:11,2:11:449:2:73:-3.0158,0,-36.8525 0/0:23:23,0:23:907:0:0:0,-6.92369,-81.9379 0/0:27:27,0:27:1066:0:0:0,-8.12781,-96.2199 0/1:44:37,7:37:1450:7:274:-11.78,0,-117.501 0/0:14:14,0:14:505:0:0:0,-4.21442,-45.7731 0/0:22:22,0:22:867:0:0:0,-6.62266,-78.3362 dDocent_Contig_13730 16 . G A 129.891 . AB=0.139241;ABP=92.3155;AC=2;AF=0.166667;AN=12;AO=21;CIGAR=1X;DP=277;DPB=277;DPRA=1.00435;EPP=48.6112;EPPR=558.907;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.904762;PAIREDR=0.957031;PAO=0;PQA=0;PQR=0;PRO=0;QA=830;QR=9834;RO=256;RPL=0;RPP=48.6112;RPPR=558.907;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=256;SRP=558.907;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:25,2:25:937:2:77:0,-0.818668,-77.3196 0/0:89:83,6:83:3222:6:237:0,-5.08858,-268.397 0/1:36:31,5:31:1191:5:200:-7.54246,0,-96.6402 0/1:43:37,6:37:1430:6:236:-8.66836,0,-116.021 0/0:46:46,0:46:1733:0:0:0,-13.8474,-156.21 0/0:36:34,2:34:1321:2:80:0,-3.2455,-111.573 dDocent_Contig_13731 17 . A G 108.35 . AB=0.152174;ABP=51.3492;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=318;DPB=318;DPRA=1.07246;EPP=24.725;EPPR=671.824;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.7468;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.792208;PAO=0;PQA=0;PQR=0;PRO=0;QA=410;QR=12317;RO=308;RPL=0;RPP=24.725;RPPR=671.824;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=308;SRP=671.824;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:36:36,0:36:1448:0:0:0,-10.8371,-130.521 0/0:61:61,0:61:2437:0:0:0,-18.3628,-219.414 0/0:58:58,0:58:2327:0:0:0,-17.4597,-209.584 0/0:52:52,0:52:2087:0:0:0,-15.6536,-187.947 0/1:46:39,7:39:1547:7:287:-12.3579,0,-125.623 0/0:65:62,3:62:2471:3:123:0,-8.10216,-211.024 dDocent_Contig_13732 7 . A T 791.828 . AB=0.3;ABP=41.2282;AC=2;AF=0.166667;AN=12;AO=33;CIGAR=1X;DP=205;DPB=205;DPRA=2.31579;EPP=74.6689;EPPR=376.504;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.988372;PAO=0;PQA=0;PQR=0;PRO=0;QA=1276;QR=6549;RO=172;RPL=0;RPP=74.6689;RPPR=376.504;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=172;SRP=376.504;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:943:0:0:0,-7.52575,-85.1828 0/0:20:20,0:20:772:0:0:0,-6.0206,-69.808 0/0:13:13,0:13:505:0:0:0,-3.91339,-45.7991 0/0:37:37,0:37:1426:0:0:0,-11.1381,-128.619 0/1:66:42,24:42:1570:24:927:-63.8792,0,-121.701 0/1:44:35,9:35:1333:9:349:-18.5254,0,-107.01 dDocent_Contig_13734 98 . N C 44.7954 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=48;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:48:-4.47898,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13735 43 . A T 4773.55 . AB=0.567857;ABP=14.2089;AC=5;AF=0.416667;AN=12;AO=159;CIGAR=1X;DP=308;DPB=308;DPRA=2;EPP=348.274;EPPR=326.56;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.36478;PAIREDR=0.644295;PAO=0;PQA=0;PQR=0;PRO=0;QA=6328;QR=5767;RO=149;RPL=0;RPP=348.274;RPPR=326.56;RPR=159;RUN=1;SAF=159;SAP=348.274;SAR=0;SRF=149;SRP=326.56;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:14,24:14:529:24:955:-74.8145,0,-36.4992 0/1:87:39,48:39:1511:48:1906:-145.552,0,-110.05 0/1:33:10,23:10:375:23:922:-73.3485,0,-24.1572 0/1:95:36,59:36:1366:59:2345:-182.61,0,-94.6048 0/0:28:28,0:28:1102:0:0:0,-8.42884,-99.4683 0/1:27:22,5:22:884:5:200:-10.2517,0,-71.7403 dDocent_Contig_13736 38 . G A 1007.37 . AB=0;ABP=0;AC=4;AF=0.333333;AN=12;AO=28;CIGAR=1X;DP=123;DPB=123;DPRA=0.589474;EPP=63.8115;EPPR=209.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1103;QR=3738;RO=95;RPL=0;RPP=63.8115;RPPR=209.3;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=95;SRP=209.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:658:0:0:0,-5.11751,-59.5475 0/0:52:52,0:52:2055:0:0:0,-15.6536,-185.148 0/0:14:14,0:14:543:0:0:0,-4.21442,-49.2074 0/0:12:12,0:12:482:0:0:0,-3.61236,-43.732 1/1:9:0,9:0:0:9:359:-32.6739,-2.70927,0 1/1:19:0,19:0:0:19:744:-67.2846,-5.71957,0 dDocent_Contig_13737 1 . N G 985.441 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=32;CIGAR=1X;DP=32;DPB=32;DPRA=0;EPP=72.4974;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0625;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1064;QR=0;RO=0;RPL=0;RPP=72.4974;RPPR=0;RPR=32;RUN=1;SAF=0;SAP=72.4974;SAR=32;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:5:0,5:0:0:5:173:-15.9102,-1.50515,0 1/1:7:0,7:0:0:7:240:-21.9351,-2.10721,0 1/1:4:0,4:0:0:4:139:-12.8527,-1.20412,0 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:3:0,3:0:0:3:104:-9.70309,-0.90309,0 1/1:11:0,11:0:0:11:338:-30.7171,-3.31133,0 dDocent_Contig_13740 107 . N C 61.7461 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=65;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:65:-6.17353,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13741 19 . A G 400.592 . AB=0.160714;ABP=170.989;AC=4;AF=0.333333;AN=12;AO=28;CIGAR=1X;DP=285;DPB=285;DPRA=1.26154;EPP=63.8115;EPPR=561.079;GTI=0;LEN=1;MEANALT=1;MQM=58.5357;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1133;QR=10100;RO=257;RPL=0;RPP=63.8115;RPPR=561.079;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=257;SRP=561.079;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:33,4:33:1305:4:162:-3.82885,0,-106.582 0/0:78:77,1:77:3014:1:41:0,-19.3858,-267.281 0/1:68:58,10:58:2296:10:407:-16.5206,0,-186.343 0/0:39:39,0:39:1526:0:0:0,-11.7402,-137.579 0/1:52:45,7:45:1756:7:279:-9.82722,0,-142.612 0/1:11:5,6:5:203:6:244:-17.1033,0,-15.3417 dDocent_Contig_13742 44 . C A 31.2935 . AB=0.0985915;ABP=102.378;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=329;DPB=329;DPRA=1.40146;EPP=35.5824;EPPR=659.044;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.466667;PAIREDR=0.423567;PAO=0;PQA=0;PQR=0;PRO=0;QA=607;QR=12588;RO=314;RPL=0;RPP=35.5824;RPPR=659.044;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=314;SRP=684.853;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:41,0:41:1650:0:0:0,-12.3422,-148.727 0/0:72:68,4:68:2731:4:163:0,-6.61573,-230.844 0/0:59:59,0:59:2383:0:0:0,-17.7608,-214.611 0/1:71:64,7:64:2583:7:285:-4.65128,0,-211.217 0/0:37:37,0:37:1440:0:0:0,-11.1381,-129.836 0/0:49:45,4:45:1801:4:159:0,-0.0585147,-147.61 dDocent_Contig_13743 82 . G T 132.377 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=4;CIGAR=1X;DP=93;DPB=93;DPRA=0.224719;EPP=11.6962;EPPR=196.271;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.38813e-21;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=138;QR=3047;RO=89;RPL=4;RPP=11.6962;RPPR=196.271;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=89;SRP=196.271;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:3:3,0:3:105:0:0:0,-0.90309,-9.79616 0/0:39:39,0:39:1318:0:0:0,-11.7402,-118.917 0/0:23:23,0:23:795:0:0:0,-6.92369,-71.8695 0/0:15:15,0:15:517:0:0:0,-4.51545,-46.8578 1/1:4:0,4:0:0:4:138:-12.7604,-1.20412,0 0/0:9:9,0:9:312:0:0:0,-2.70927,-28.4162 dDocent_Contig_13744 51 . A C 4392.38 . AB=0.607362;ABP=19.3296;AC=7;AF=0.583333;AN=12;AO=137;CIGAR=1X;DP=201;DPB=201;DPRA=0;EPP=300.502;EPPR=141.985;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.50365;PAIREDR=0.515625;PAO=0;PQA=0;PQR=0;PRO=0;QA=5508;QR=2561;RO=64;RPL=137;RPP=300.502;RPPR=141.985;RPR=0;RUN=1;SAF=137;SAP=300.502;SAR=0;SRF=64;SRP=141.985;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:9,17:9:356:17:684:-54.0633,0,-24.5741 0/1:33:13,20:13:525:20:804:-62.7424,0,-37.6627 0/1:30:16,14:16:649:14:566:-42.2508,0,-49.7113 0/1:31:10,21:10:387:21:828:-65.4915,0,-25.8461 1/1:38:0,38:0:0:38:1531:-138.022,-11.4391,0 0/1:43:16,27:16:644:27:1095:-85.8897,0,-45.3497 dDocent_Contig_13745 107 . N T 886.398 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=30;CIGAR=1X;DP=31;DPB=31;DPRA=0;EPP=68.1545;EPPR=0;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0.966667;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=963;QR=0;RO=0;RPL=0;RPP=68.1545;RPPR=0;RPR=30;RUN=1;SAF=0;SAP=68.1545;SAR=30;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:7:0,7:0:0:7:232:-21.2055,-2.10721,0 1/1:12:0,12:0:0:12:390:-35.4153,-3.61236,0 1/1:3:0,3:0:0:3:88:-8.21205,-0.90309,0 1/1:8:0,7:0:0:7:221:-19.9082,-2.10721,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:32:-3.19931,-0.30103,0 dDocent_Contig_13746 21 . C T 1001.24 . AB=0.182119;ABP=268.074;AC=5;AF=0.416667;AN=12;AO=56;CIGAR=1X;DP=332;DPB=332;DPRA=0;EPP=124.613;EPPR=602.337;GTI=0;LEN=1;MEANALT=1;MQM=59.8214;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.326087;PAO=0;PQA=0;PQR=0;PRO=0;QA=2231;QR=11047;RO=276;RPL=0;RPP=124.613;RPPR=602.337;RPR=56;RUN=1;SAF=56;SAP=124.613;SAR=0;SRF=276;SRP=602.337;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:51:41,10:41:1635:10:405:-21.4532,0,-132.024 0/0:30:29,1:29:1169:1:32:0,-5.83159,-102.29 0/1:46:40,6:40:1605:6:229:-7.1263,0,-130.835 0/1:94:67,27:67:2677:27:1090:-70.0825,0,-212.756 0/1:66:58,8:58:2322:8:313:-8.66546,0,-189.273 0/1:45:41,4:41:1639:4:162:-1.42061,0,-134.197 dDocent_Contig_13749 1 . N G 673.888 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=26;CIGAR=1X;DP=26;DPB=26;DPRA=0;EPP=59.4686;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=30.5769;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=992;QR=0;RO=0;RPL=0;RPP=59.4686;RPPR=0;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:10:0,10:0:0:10:392:-30.8488,-3.0103,0 1/1:1:0,1:0:0:1:30:-2.97345,-0.30103,0 1/1:8:0,8:0:0:8:315:-21.6641,-2.40824,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:40:-1.59832,-0.30103,0 1/1:6:0,6:0:0:6:215:-9.52331,-1.80618,0 dDocent_Contig_13750 209 . N G 69.3116 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=73;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:73:-6.93007,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13751 21 . C T 4871.7 . AB=0.0826446;ABP=186.078;AC=0;AF=0;AN=12;AO=10;CIGAR=1M2X3M;DP=382;DPB=344.667;DPRA=0;EPP=24.725;EPPR=226.672;GTI=0;LEN=1;MEANALT=4.5;MQM=42.3;MQMR=59.0485;NS=6;NUMALT=6;ODDS=0;PAIRED=0;PAIREDR=0.699029;PAO=0;PQA=0;PQR=0;PRO=0;QA=389;QR=4040;RO=103;RPL=0;RPP=24.725;RPPR=226.672;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=103;SRP=226.672;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:68:20,0,0,19,8,13,7:20:774:0,0,19,8,13,7:0,0,734,312,517,218:-53.7729,-59.7935,-123.372,-59.7935,-123.372,-123.372,0,-63.583,-63.583,-57.8635,-35.4259,-99.0053,-99.0053,-39.2158,-96.5971,-17.2917,-80.8747,-80.8747,-21.0821,-56.507,-76.9613,-42.8033,-106.379,-106.379,-46.5929,-82.0131,-63.8828,-104.272 0|0:53:15,0,0,32,2,2,2:15:589:0,0,32,2,2,2:0,0,1240,77,81,75:-96.2181,-100.734,-149.164,-100.734,-149.164,-149.164,0,-48.434,-48.434,-38.801,-94.6446,-143.075,-143.075,-42.3463,-142.473,-94.0532,-142.484,-142.484,-41.7533,-136.395,-141.882,-94.5904,-143.021,-143.021,-42.292,-136.932,-136.341,-142.419 0|0:60:27,0,0,27,0,0,5:27:1066:0,0,27,0,0,5:0,0,1033,0,0,203:-76.0329,-84.1608,-171.777,-84.1608,-171.777,-171.777,0,-87.6024,-87.6024,-79.4746,-84.1608,-171.777,-171.777,-87.6024,-171.777,-84.1608,-171.777,-171.777,-87.6024,-171.777,-171.777,-67.4148,-155.034,-155.034,-70.8585,-155.034,-155.034,-153.528 0|0:66:13,4,0,25,0,18,6:13:515:4,0,25,0,18,6:161,0,955,0,706,178:-89.5688,-80.2107,-121.373,-93.4822,-122.577,-135.848,-15.2298,-44.3283,-57.6002,-50.0745,-93.4822,-122.577,-135.848,-57.6002,-135.848,-35.8837,-64.9815,-78.2533,0,-78.2533,-72.8347,-79.7864,-108.88,-122.15,-43.9087,-122.15,-64.5588,-120.344 0|0:83:16,39,0,11,0,7,10:16:630:39,0,11,0,7,10:1546,0,420,0,269,403:-122.442,0,-40.0692,-127.258,-51.8094,-179.066,-92.8343,-17.3863,-144.642,-141.33,-127.258,-51.8094,-179.066,-144.642,-179.066,-105.271,-29.823,-157.079,-122.655,-157.079,-154.972,-94.0389,-18.5883,-145.847,-111.423,-145.847,-123.86,-142.837 0|0:52:12,3,4,17,0,1,15:12:466:3,4,17,0,1,15:119,154,661,0,40,591:-60.3576,-54.1733,-91.5355,-51.3288,-79.7973,-88.3897,-10.3533,-38.8205,-35.9763,-43.4995,-63.9699,-92.4386,-89.5938,-48.6171,-102.235,-60.6898,-89.1585,-86.3138,-45.337,-98.9551,-98.654,-15.352,-43.8211,-40.9767,0,-53.618,-50.3379,-49.1026 dDocent_Contig_13752 45 . A G 13141.8 . AB=0.322581;ABP=36.9133;AC=8;AF=0.666667;AN=12;AO=390;CIGAR=1X;DP=513;DPB=513;DPRA=0;EPP=849.885;EPPR=267.93;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.974359;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=15396;QR=4839;RO=122;RPL=0;RPP=849.885;RPPR=267.93;RPR=390;RUN=1;SAF=390;SAP=849.885;SAR=0;SRF=122;SRP=267.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:58:40,18:40:1580:18:723:-47.9353,0,-124.979 0/0:33:31,2:31:1223:2:70:0,-3.28724,-103.696 1/1:22:0,22:0:0:22:876:-79.1485,-6.62266,0 0/1:66:44,22:44:1761:22:890:-60.5394,0,-138.839 1/1:175:0,175:0:0:175:6933:-623.672,-52.6803,0 1/1:159:7,151:7:275:151:5904:-506.102,-22.5913,0 dDocent_Contig_13753 26 . C G 60.9706 . AB=0.136364;ABP=53.5464;AC=2;AF=0.166667;AN=12;AO=7;CIGAR=1X;DP=102;DPB=102;DPRA=1.26667;EPP=18.2106;EPPR=209.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.947368;PAO=0;PQA=0;PQR=0;PRO=0;QA=273;QR=3665;RO=95;RPL=0;RPP=18.2106;RPPR=209.3;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=95;SRP=209.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:13:11,2:11:397:2:82:-3.86629,0,-32.1389 0/0:10:10,0:10:382:0:0:0,-3.0103,-34.729 0/1:31:27,4:27:1074:4:160:-5.4515,0,-87.6141 0/0:13:12,1:12:430:1:31:0,-0.813936,-35.9236 0/0:14:14,0:14:544:0:0:0,-4.21442,-49.3011 0/0:21:21,0:21:838:0:0:0,-6.32163,-75.7303 dDocent_Contig_13754 107 . N T 452.304 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=17;CIGAR=1X;DP=17;DPB=17;DPRA=0;EPP=39.9253;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=479;QR=0;RO=0;RPL=0;RPP=39.9253;RPPR=0;RPR=17;RUN=1;SAF=0;SAP=39.9253;SAR=17;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:5:0,5:0:0:5:141:-12.9695,-1.50515,0 1/1:2:0,2:0:0:2:66:-6.26818,-0.60206,0 1/1:3:0,3:0:0:3:83:-7.7441,-0.90309,0 1/1:4:0,4:0:0:4:105:-9.71079,-1.20412,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:84:-7.83836,-0.90309,0 dDocent_Contig_13755 62 . C G 192.528 . AB=0.4;ABP=3.44459;AC=3;AF=0.25;AN=12;AO=7;CIGAR=1X;DP=75;DPB=75;DPRA=0.307692;EPP=18.2106;EPPR=150.67;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.428571;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=237;QR=2557;RO=68;RPL=7;RPP=18.2106;RPPR=150.67;RPR=0;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=68;SRP=150.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:8:8,0:8:301:0:0:0,-2.40824,-27.4471 0/0:26:26,0:26:943:0:0:0,-7.82678,-85.163 0/0:23:23,0:23:887:0:0:0,-6.92369,-80.1426 0/0:8:8,0:8:313:0:0:0,-2.40824,-28.5352 1/1:5:0,5:0:0:5:174:-15.9961,-1.50515,0 0/1:5:3,2:3:113:2:63:-4.47829,0,-9.03326 dDocent_Contig_13757 16 . C T 4194.22 . AB=0.179798;ABP=1325.49;AC=4;AF=0.333333;AN=12;AO=323;CIGAR=1X;DP=2182;DPB=2182;DPRA=0;EPP=704.396;EPPR=4000.77;GTI=0;LEN=1;MEANALT=1.16667;MQM=51.4582;MQMR=59.692;NS=6;NUMALT=1;ODDS=0;PAIRED=0.306502;PAIREDR=0.298869;PAO=0;PQA=0;PQR=0;PRO=0;QA=12742;QR=74297;RO=1857;RPL=0;RPP=704.396;RPPR=4035.43;RPR=323;RUN=1;SAF=323;SAP=704.396;SAR=0;SRF=1853;SRP=4000.77;SRR=4;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:303:264,37:264:10563:37:1442:-25.5275,0,-854.373 0/1:464:415,49:415:16585:49:1938:-15.4281,0,-1351.1 0/0:284:266,18:266:10694:18:717:0,-28.6324,-904.397 0/0:413:375,38:375:14961:38:1502:0,-4.20568,-1223.88 0/1:333:247,86:247:9865:86:3413:-198.417,0,-785 0/1:385:290,95:290:11629:95:3730:-187.272,0,-927.633 dDocent_Contig_13759 49 . A G 121.176 . AB=0.26087;ABP=14.4341;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=105;DPB=105;DPRA=1.625;EPP=20.3821;EPPR=213.643;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=315;QR=3705;RO=97;RPL=0;RPP=20.3821;RPPR=213.643;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=97;SRP=213.643;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:15:10,5:10:384:5:194:-13.3174,0,-30.4007 0/0:13:13,0:13:493:0:0:0,-3.91339,-44.715 0/0:1:1,0:1:39:0:0:0,-0.30103,-3.89656 0/1:8:7,1:7:270:1:39:-1.48832,0,-22.2571 0/0:42:40,2:40:1528:2:82:0,-4.86358,-130.012 0/0:26:26,0:26:991:0:0:0,-7.82678,-89.5017 dDocent_Contig_13760 53 . A G 623.296 . AB=0.857143;ABP=18.5208;AC=3;AF=0.25;AN=12;AO=19;CIGAR=1X;DP=208;DPB=208;DPRA=0.224599;EPP=44.2683;EPPR=413.419;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=745;QR=7598;RO=189;RPL=19;RPP=44.2683;RPPR=413.419;RPR=0;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=189;SRP=413.419;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:82:82,0:82:3301:0:0:0,-24.6845,-297.141 0/0:31:31,0:31:1229:0:0:0,-9.33193,-110.887 0/0:20:20,0:20:809:0:0:0,-6.0206,-73.1259 0/0:54:54,0:54:2177:0:0:0,-16.2556,-196.1 1/1:7:0,7:0:0:7:274:-25.0269,-2.10721,0 0/1:14:2,12:2:82:12:471:-38.5226,0,-3.56526 dDocent_Contig_13761 24 . A G 363.39 . AB=0.666667;ABP=7.35324;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=192;DPB=192;DPRA=0.517241;EPP=29.068;EPPR=393.875;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=477;QR=7211;RO=180;RPL=0;RPP=29.068;RPPR=393.875;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=180;SRP=393.875;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1078:0:0:0,-8.12781,-97.3086 0/0:17:17,0:17:686:0:0:0,-5.11751,-62.0702 0/0:52:52,0:52:2065:0:0:0,-15.6536,-186.036 0/0:69:69,0:69:2774:0:0:0,-20.7711,-249.763 0/1:18:6,12:6:239:12:477:-37.8619,0,-16.4663 0/0:9:9,0:9:369:0:0:0,-2.70927,-33.5755 dDocent_Contig_13762 14 . A C 558.839 . AB=0.180233;ABP=155.771;AC=4;AF=0.333333;AN=12;AO=32;CIGAR=1X;DP=230;DPB=230;DPRA=2.675;EPP=72.4974;EPPR=432.962;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.625;PAIREDR=0.888889;PAO=0;PQA=0;PQR=0;PRO=0;QA=1301;QR=7936;RO=198;RPL=0;RPP=72.4974;RPPR=432.962;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=198;SRP=432.962;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:42:41,1:41:1657:1:41:0,-8.54869,-145.258 0/1:61:55,6:55:2182:6:242:-3.79412,0,-178.198 0/1:35:24,11:24:961:11:446:-29.9597,0,-76.2534 0/1:66:56,10:56:2248:10:409:-17.3026,0,-182.613 0/1:10:6,4:6:241:4:163:-12.0481,0,-19.056 0/0:16:16,0:16:647:0:0:0,-4.81648,-58.5639 dDocent_Contig_13763 12 . G C 4311.26 . AB=0.401535;ABP=35.9378;AC=6;AF=0.5;AN=12;AO=157;CIGAR=1X;DP=391;DPB=391;DPRA=0;EPP=343.931;EPPR=511.135;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6203;QR=9124;RO=234;RPL=0;RPP=343.931;RPPR=511.135;RPR=157;RUN=1;SAF=157;SAP=343.931;SAR=0;SRF=234;SRP=511.135;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:62:36,26:36:1385:26:1032:-74.5148,0,-106.254 0/1:69:44,25:44:1722:25:961:-66.015,0,-134.445 0/1:96:68,28:68:2665:28:1112:-71.4729,0,-211.109 0/1:53:34,19:34:1338:19:757:-52.5011,0,-104.737 0/1:48:29,19:29:1117:19:752:-53.5572,0,-86.368 0/1:63:23,40:23:897:40:1589:-124.287,0,-62.0787 dDocent_Contig_13765 107 . N G 518.025 . AB=0;ABP=0;AC=10;AF=1;AN=10;AO=16;CIGAR=1X;DP=16;DPB=16;DPRA=0;EPP=37.7539;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=548;QR=0;RO=0;RPL=0;RPP=37.7539;RPPR=0;RPR=16;RUN=1;SAF=0;SAP=37.7539;SAR=16;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 1/1:6:0,6:0:0:6:206:-18.8767,-1.80618,0 1/1:5:0,5:0:0:5:169:-15.543,-1.50515,0 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_13766 27 . C T 1255.24 . AB=0.238298;ABP=142.807;AC=5;AF=0.416667;AN=12;AO=60;CIGAR=1X;DP=288;DPB=288;DPRA=0;EPP=133.299;EPPR=498.106;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.35;PAIREDR=0.399123;PAO=0;PQA=0;PQR=0;PRO=0;QA=2422;QR=9057;RO=228;RPL=0;RPP=133.299;RPPR=498.106;RPR=60;RUN=1;SAF=60;SAP=133.299;SAR=0;SRF=228;SRP=498.106;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:62:44,18:44:1752:18:731:-47.4503,0,-139.231 0/1:72:55,17:55:2183:17:685:-40.3053,0,-174.967 0/1:40:32,8:32:1255:8:328:-17.8491,0,-101.174 0/0:53:49,4:49:1950:4:160:0,-1.17079,-160.916 0/1:29:26,3:26:1050:3:114:-1.90084,0,-86.058 0/1:32:22,10:22:867:10:404:-27.0869,0,-68.7087 dDocent_Contig_13767 47 . G T 199.927 . AB=0.166667;ABP=78.288;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X1M1X;DP=240;DPB=240;DPRA=1.18182;EPP=33.4109;EPPR=472.203;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.0714286;PAIREDR=0.642857;PAO=0;PQA=0;PQR=0;PRO=0;QA=551;QR=8454;RO=224;RPL=0;RPP=33.4109;RPPR=472.203;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=224;SRP=489.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:19:17,2:17:639:2:79:-1.77767,0,-52.1218 0|1:59:48,11:48:1778:11:432:-21.4743,0,-142.511 0|0:38:38,0:38:1439:0:0:0,-11.4391,-129.789 0|0:52:51,1:51:1909:1:40:0,-11.6579,-168.066 0|0:51:49,0:49:1876:0:0:0,-14.7505,-168.692 0|0:21:21,0:21:813:0:0:0,-6.32163,-73.4942 dDocent_Contig_13769 13 . A G 185.849 . AB=0.232558;ABP=29.7245;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1M2X;DP=206;DPB=205;DPRA=2.78125;EPP=37.7539;EPPR=402.561;GTI=0;LEN=1;MEANALT=1.25;MQM=34.8125;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=594;QR=6934;RO=184;RPL=0;RPP=37.7539;RPPR=402.561;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=184;SRP=402.561;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:19:17,0,2:17:639:0,2:0,66:0,-5.11751,-57.5597,-0.503157,-53.2305,-52.6285 0|1:43:33,0,10:33:1226:0,10:0,379:-18.1974,-28.1314,-128.485,0,-100.703,-97.6923 0|0:75:70,0,2:70:2647:0,2:0,77:0,-21.0721,-238.091,-17.008,-233.977,-233.375 0|0:41:39,0,2:39:1490:0,2:0,72:0,-11.7402,-134.043,-6.06812,-128.703,-128.101 0|0:16:16,0,0:16:603:0,0:0,0:0,-4.81648,-54.6077,-4.81648,-54.6077,-54.6077 0|0:12:9,3,0:9:329:3,0:117,0:-3.60734,0,-26.3413,-6.31661,-27.2444,-33.2763 dDocent_Contig_13772 11 . G A 89.2195 . AB=0.5;ABP=3.0103;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X1M1X;DP=63;DPB=63;DPRA=0.727273;EPP=11.6962;EPPR=128.956;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=139;QR=2138;RO=58;RPL=0;RPP=11.6962;RPPR=128.956;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=58;SRP=128.956;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:7:7,0:7:263:0:0:0,-2.10721,-24.0293 0|1:8:4,4:4:146:4:139:-10.4444,0,-11.0896 0|0:15:15,0:15:531:0:0:0,-4.51545,-48.1164 0|0:1:1,0:1:39:0:0:0,-0.30103,-3.89656 0|0:7:7,0:7:266:0:0:0,-2.10721,-24.302 0|0:25:24,0:24:893:0:0:0,-7.22472,-80.3464 dDocent_Contig_13773 116 . C T 36.4318 . AB=0.1875;ABP=16.582;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=90;DPB=90;DPRA=1.08108;EPP=9.52472;EPPR=191.928;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=107;QR=3073;RO=87;RPL=0;RPP=9.52472;RPPR=191.928;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=191.928;SRR=87;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:1:1,0:1:36:0:0:0,-0.30103,-3.59827 0/0:4:4,0:4:148:0:0:0,-1.20412,-13.681 0/0:13:13,0:13:459:0:0:0,-3.91339,-41.6418 0/0:15:15,0:15:512:0:0:0,-4.51545,-46.3964 0/1:16:13,3:13:448:3:107:-5.16553,0,-35.8323 0/0:41:41,0:41:1470:0:0:0,-12.3422,-132.581 dDocent_Contig_13775 17 . G A 1665.63 . AB=0.289916;ABP=94.2486;AC=6;AF=0.5;AN=12;AO=69;CIGAR=1X;DP=238;DPB=238;DPRA=0;EPP=152.842;EPPR=369.989;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.550725;PAIREDR=0.443787;PAO=0;PQA=0;PQR=0;PRO=0;QA=2748;QR=6740;RO=169;RPL=0;RPP=152.842;RPPR=369.989;RPR=69;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=169;SRP=369.989;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:28,10:28:1128:10:399:-24.8286,0,-90.3644 0/1:50:35,15:35:1393:15:597:-39.0162,0,-110.574 0/1:32:26,6:26:1022:6:240:-12.3427,0,-82.6297 0/1:48:24,24:24:971:24:955:-71.7994,0,-73.2379 0/1:16:11,5:11:441:5:198:-13.3809,0,-35.2276 0/1:54:45,9:45:1785:9:359:-16.4166,0,-144.608 dDocent_Contig_13776 23 . C T 1962.92 . AB=0.0952381;ABP=122.545;AC=0;AF=0;AN=12;AO=8;CIGAR=2M1I10M1X1M;DP=280;DPB=285.643;DPRA=0;EPP=20.3821;EPPR=302.673;GTI=0;LEN=1;MEANALT=6.5;MQM=60;MQMR=60;NS=6;NUMALT=8;ODDS=0;PAIRED=1;PAIREDR=0.666667;PAO=0;PQA=0;PQR=0;PRO=0;QA=243;QR=5382;RO=138;RPL=0;RPP=20.3821;RPPR=302.673;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=138;SRP=302.673;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:52:25,0,0,4,1,3,8,0,11:25:968:0,0,4,1,3,8,0,11:0,0,160,40,114,311,0,429:-27.7291,-35.2548,-114.766,-35.2548,-114.766,-114.766,-22.0728,-101.585,-101.585,-100.381,-31.9594,-111.471,-111.471,-98.2893,-111.17,-25.9071,-105.417,-105.417,-92.2362,-102.122,-104.514,-9.70223,-89.2127,-89.2127,-76.0313,-85.9174,-79.8643,-86.8045,-35.2548,-114.766,-114.766,-101.585,-111.471,-105.417,-89.2127,-114.766,0,-79.5106,-79.5106,-66.329,-76.2152,-70.1622,-53.9573,-79.5106,-76.1992 0|0:62:41,0,0,0,0,3,15,1,1:41:1607:0,0,0,0,3,15,1,1:0,0,0,0,118,558,24,40:-33.3205,-45.6627,-177.823,-45.6627,-177.823,-177.823,-45.6627,-177.823,-177.823,-177.823,-45.6627,-177.823,-177.823,-177.823,-177.823,-35.9525,-168.116,-168.116,-168.116,-168.116,-167.213,0,-132.165,-132.165,-132.165,-132.165,-122.458,-127.65,-43.8104,-175.967,-175.967,-175.967,-175.967,-166.26,-130.309,-175.666,-42.3663,-174.528,-174.528,-174.528,-174.528,-164.821,-128.87,-172.672,-174.227 0|0:37:19,0,0,0,2,0,4,1,11:19:747:0,0,0,2,0,4,1,11:0,0,0,82,0,147,41,443:-30.8025,-36.5221,-97.9608,-36.5221,-97.9608,-97.9608,-36.5221,-97.9608,-97.9608,-97.9608,-29.7522,-91.1918,-91.1918,-91.1918,-90.5897,-36.5221,-97.9608,-97.9608,-97.9608,-91.1918,-97.9608,-24.5125,-85.9464,-85.9464,-85.9464,-79.1774,-85.9464,-84.7422,-33.1372,-94.5763,-94.5763,-94.5763,-87.8072,-94.5763,-82.5619,-94.2753,0,-61.4457,-61.4457,-61.4457,-54.6759,-61.4457,-49.4322,-58.0608,-58.1343 0|0:45:31,4,0,0,0,1,6,0,1:31:1221:4,0,0,0,1,6,0,1:156,0,0,0,41,227,0,41:-9.27567,-5.78049,-105.043,-18.6076,-106.247,-119.069,-18.6076,-106.247,-119.069,-119.069,-18.6076,-106.247,-119.069,-119.069,-119.069,-15.221,-102.863,-115.685,-115.685,-115.685,-115.384,0,-87.6423,-100.464,-100.464,-100.464,-97.0796,-98.658,-18.6076,-106.247,-119.069,-119.069,-119.069,-115.685,-100.464,-119.069,-15.221,-102.863,-115.685,-115.685,-115.685,-112.3,-97.0796,-115.685,-115.384 0|0:51:7,4,4,1,3,0,28,3,0:7:257:4,4,1,3,0,28,3,0:154,121,41,112,0,1071,115,0:-85.7699,-75.2325,-95.0344,-78.2082,-86.5689,-98.0089,-84.4923,-92.8537,-95.8283,-105.197,-78.7088,-87.0701,-90.045,-96.3299,-98.8117,-87.8771,-96.2385,-99.213,-105.498,-99.7148,-108.883,0,-8.36009,-11.3449,-17.6218,-11.8383,-21.0079,-12.5791,-78.4403,-86.8016,-89.7765,-96.0615,-90.2779,-99.4463,-11.5689,-98.5432,-87.8771,-96.2385,-99.213,-105.498,-99.7148,-108.883,-21.0079,-99.4463,-108.883 0|0:33:15,0,4,0,3,0,8,1,0:15:582:0,4,0,3,0,8,1,0:0,122,0,120,0,306,38,0:-20.6161,-25.1315,-72.9642,-15.3722,-63.2011,-61.997,-25.1315,-72.9642,-63.2011,-72.9642,-15.2364,-63.0761,-53.3135,-63.0761,-62.173,-25.1315,-72.9642,-63.2011,-72.9642,-63.0761,-72.9642,0,-47.8551,-38.0943,-47.8551,-37.9651,-47.8551,-45.4469,-22.0131,-69.8472,-60.0844,-69.8472,-59.959,-69.8472,-44.7378,-69.5462,-25.1315,-72.9642,-63.2011,-72.9642,-63.0761,-72.9642,-47.8551,-69.8472,-72.9642 dDocent_Contig_13777 19 . C T 92.6716 . AB=0.1375;ABP=94.3207;AC=3;AF=0.25;AN=12;AO=12;CIGAR=1X;DP=165;DPB=165;DPRA=0.852459;EPP=29.068;EPPR=335.246;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.947712;PAO=0;PQA=0;PQR=0;PRO=0;QA=457;QR=6069;RO=153;RPL=0;RPP=29.068;RPPR=335.246;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=153;SRP=335.246;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:23,1:23:906:1:41:0,-3.13015,-77.7497 0/1:31:26,5:26:1000:5:201:-9.13917,0,-80.9513 0/1:14:12,2:12:467:2:76:-2.99984,0,-38.1588 0/1:35:31,4:31:1256:4:139:-2.30922,0,-102.768 0/0:31:31,0:31:1248:0:0:0,-9.33193,-112.591 0/0:30:30,0:30:1192:0:0:0,-9.0309,-107.558 dDocent_Contig_13778 107 . N G 151.346 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X4M;DP=7;DPB=7;DPRA=1.33333;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=118;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:3:0,3,0:0:0:3,0:42,0:-3.91997,-0.90309,0,-3.91997,-0.90309,-3.91997 1|1:4:0,0,4:0:0:0,4:0,118:-10.9127,-10.9127,-10.9127,-1.20412,-1.20412,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_13779 94 . C T 204.414 . AB=0.333333;ABP=4.45795;AC=1;AF=0.25;AN=4;AO=2;CIGAR=1X3M5X7I5X;DP=7;DPB=10.5;DPRA=6;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=0;NS=2;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=76;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1|0:6:0,2,4:0:0:2,4:76,145:-18.4402,-12.2013,-11.5993,-6.61275,0,-5.40863 0|0:1:0,0,1:0:0:0,1:0,37:-3.69783,-3.69783,-3.69783,-0.30103,-0.30103,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_13780 20 . C T 789.703 . AB=0.0625;ABP=109.412;AC=0;AF=0;AN=12;AO=4;CIGAR=1M1X2M;DP=139;DPB=157;DPRA=2.90909;EPP=11.6962;EPPR=209.388;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.858586;PAO=0;PQA=0;PQR=0;PRO=0;QA=156;QR=3907;RO=99;RPL=0;RPP=11.6962;RPPR=217.986;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=98;SRP=209.388;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:25:16,6,2:16:632:6,2:230,76:-14.0554,0,-50.2058,-12.6402,-45.7807,-64.0497 0|0:28:25,3,0:25:980:3,0:121,0:-2.85115,0,-80.072,-10.3769,-80.9751,-90.9503 0|0:25:14,11,0:14:553:11,0:414,0:-30.0792,0,-42.5875,-34.2937,-45.8988,-79.8083 0|0:39:22,15,2:22:859:15,2:560,80:-39.1963,0,-66.0884,-39.2259,-64.0131,-109.247 0|0:9:9,0,0:9:359:0,0:0,0:0,-2.70927,-32.6735,-2.70927,-32.6735,-32.6735 0|0:13:13,0,0:13:524:0,0:0,0:0,-3.91339,-47.5078,-3.91339,-47.5078,-47.5078 dDocent_Contig_13781 80 . C G 86.4475 . AB=0.5;ABP=3.0103;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=110;DPB=110;DPRA=0.392157;EPP=11.6962;EPPR=233.186;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.839623;PAO=0;PQA=0;PQR=0;PRO=0;QA=136;QR=3559;RO=106;RPL=4;RPP=11.6962;RPPR=233.186;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=106;SRP=233.186;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1187:0:0:0,-10.536,-107.133 0/0:36:36,0:36:1229:0:0:0,-10.8371,-110.912 0/0:11:11,0:11:355:0:0:0,-3.31133,-32.2605 0/0:12:12,0:12:400:0:0:0,-3.61236,-36.3213 0/0:8:8,0:8:254:0:0:0,-2.40824,-23.1692 0/1:8:4,4:4:134:4:136:-10.1676,0,-9.98264 dDocent_Contig_13782 8 . A G 1154.25 . AB=0.398305;ABP=13.61;AC=5;AF=0.416667;AN=12;AO=48;CIGAR=1X;DP=138;DPB=138;DPRA=0;EPP=107.241;EPPR=198.443;GTI=0;LEN=1;MEANALT=1;MQM=51.7083;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.9;PAO=0;PQA=0;PQR=0;PRO=0;QA=1810;QR=3466;RO=90;RPL=0;RPP=107.241;RPPR=198.443;RPR=48;RUN=1;SAF=48;SAP=107.241;SAR=0;SRF=90;SRP=198.443;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:19,1:19:737:1:37:0,-2.33137,-62.9721 0/1:27:22,5:22:846:5:193:-9.47944,0,-68.3351 0/1:14:9,5:9:350:5:184:-12.6528,0,-27.6469 0/1:29:20,9:20:764:9:350:-22.6045,0,-60.3577 0/1:26:12,14:12:465:14:512:-38.4422,0,-34.3751 0/1:22:8,14:8:304:14:534:-41.4675,0,-21.0963 dDocent_Contig_13783 121 . C T 70.4557 . AB=0;ABP=0;AC=2;AF=0.2;AN=10;AO=2;CIGAR=1X;DP=92;DPB=92;DPRA=0.0888889;EPP=7.35324;EPPR=198.443;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=70;QR=2915;RO=90;RPL=0;RPP=7.35324;RPPR=198.443;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=198.443;SRR=90;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 0/0:43:43,0:43:1387:0:0:0,-12.9443,-125.113 0/0:13:13,0:13:435:0:0:0,-3.91339,-39.4713 0/0:6:6,0:6:171:0:0:0,-1.80618,-15.6715 0/0:28:28,0:28:922:0:0:0,-8.42884,-83.2824 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 dDocent_Contig_13784 62 . T C 5369.12 . AB=0.652015;ABP=57.8062;AC=6;AF=0.5;AN=12;AO=178;CIGAR=1X;DP=273;DPB=273;DPRA=0;EPP=389.532;EPPR=209.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.983146;PAIREDR=0.957895;PAO=0;PQA=0;PQR=0;PRO=0;QA=6985;QR=3611;RO=95;RPL=178;RPP=389.532;RPPR=209.3;RPR=0;RUN=1;SAF=178;SAP=389.532;SAR=0;SRF=95;SRP=209.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:10,16:10:373:16:622:-48.4771,0,-26.0876 0/1:50:24,26:24:943:26:1027:-77.671,0,-70.1268 0/1:39:8,31:8:292:31:1228:-99.0501,0,-14.8783 0/1:56:22,34:22:841:34:1350:-104.906,0,-59.1467 0/1:62:23,39:23:870:39:1530:-119.282,0,-59.9452 0/1:40:8,32:8:292:32:1228:-98.7473,0,-14.5833 dDocent_Contig_13785 41 . A T 410.366 . AB=0;ABP=0;AC=4;AF=0.333333;AN=12;AO=14;CIGAR=1X;DP=386;DPB=386;DPRA=0.58427;EPP=33.4109;EPPR=808.627;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=0.0714286;PAIREDR=0.862534;PAO=0;PQA=0;PQR=0;PRO=0;QA=548;QR=14748;RO=371;RPL=0;RPP=33.4109;RPPR=808.627;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=371;SRP=808.627;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:90:90,0:90:3597:0:0:0,-27.0927,-323.764 0/0:121:118,2:118:4675:2:74:0,-29.282,-413.747 0/0:88:88,0:88:3511:0:0:0,-26.4906,-316.028 0/0:76:75,1:75:2965:1:35:0,-19.3796,-263.451 1/1:4:0,4:0:0:4:155:-14.3244,-1.20412,0 1/1:7:0,7:0:0:7:284:-25.934,-2.10721,0 dDocent_Contig_13786 36 . G A 645.326 . AB=0.168103;ABP=224.987;AC=5;AF=0.416667;AN=12;AO=39;CIGAR=1X;DP=263;DPB=263;DPRA=1.49677;EPP=87.6977;EPPR=489.42;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.299107;PAO=0;PQA=0;PQR=0;PRO=0;QA=1575;QR=8950;RO=224;RPL=0;RPP=87.6977;RPPR=489.42;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=224;SRP=489.42;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:49:43,6:43:1698:6:244:-7.58836,0,-138.292 0/1:56:50,6:50:2006:6:237:-4.84364,0,-163.872 0/1:40:30,10:30:1219:10:402:-24.4984,0,-97.9379 0/1:49:39,10:39:1562:10:409:-22.4201,0,-126.067 0/0:31:31,0:31:1246:0:0:0,-9.33193,-112.407 0/1:38:31,7:31:1219:7:283:-14.4039,0,-98.5478 dDocent_Contig_13787 14 . A C 109.728 . AB=0.112069;ABP=154.639;AC=1;AF=0.0833333;AN=12;AO=13;CIGAR=1X;DP=506;DPB=506;DPRA=1.48718;EPP=31.2394;EPPR=1073.55;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.973631;PAO=0;PQA=0;PQR=0;PRO=0;QA=523;QR=19668;RO=493;RPL=0;RPP=31.2394;RPPR=1073.55;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=493;SRP=1073.55;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:46:46,0:46:1829:0:0:0,-13.8474,-164.823 0/0:120:120,0:120:4804:0:0:0,-36.1236,-432.251 0/0:70:70,0:70:2792:0:0:0,-21.0721,-251.381 0/0:60:60,0:60:2393:0:0:0,-18.0618,-215.523 0/0:94:94,0:94:3724:0:0:0,-28.2968,-335.179 0/1:116:103,13:103:4126:13:523:-12.4957,0,-336.391 dDocent_Contig_13788 13 . T C 146.068 . AB=0.105431;ABP=426.267;AC=2;AF=0.166667;AN=12;AO=50;CIGAR=1X;DP=1556;DPB=1556;DPRA=1.02039;EPP=111.584;EPPR=3266.73;GTI=0;LEN=1;MEANALT=1.4;MQM=49.12;MQMR=41.4052;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.996008;PAO=0;PQA=0;PQR=0;PRO=0;QA=1986;QR=59924;RO=1503;RPL=0;RPP=111.584;RPPR=3266.73;RPR=50;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=1503;SRP=3266.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:232:221,10:221:8841:10:408:0,-33.4446,-631.938 0/0:329:327,2:327:13095:2:82:0,-91.5254,-996.108 0/0:427:421,5:421:16706:5:198:0,-110.614,-1270.79 0/0:255:254,0:254:10137:0:0:0,-76.4616,-778.184 0/1:135:120,15:120:4777:15:610:-13.2904,0,-331.49 0/1:178:160,18:160:6368:18:688:-4.53796,0,-411.676 dDocent_Contig_13789 7 . A G 759.162 . AB=0.35;ABP=26.4622;AC=5;AF=0.416667;AN=12;AO=42;CIGAR=1X;DP=127;DPB=127;DPRA=3.42857;EPP=94.2121;EPPR=183.243;GTI=0;LEN=1;MEANALT=1.4;MQM=59.119;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.857143;PAIREDR=0.879518;PAO=0;PQA=0;PQR=0;PRO=0;QA=1319;QR=3166;RO=83;RPL=0;RPP=94.2121;RPPR=183.243;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=83;SRP=183.243;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:11:8,3:8:311:3:115:-7.41356,0,-25.043 0/1:38:24,13:24:921:13:413:-26.0432,0,-71.9477 0/1:35:23,12:23:887:12:355:-21.6921,0,-69.6141 0/1:26:13,12:13:476:12:394:-27.9824,0,-35.3896 0/1:10:8,2:8:303:2:42:-0.979043,0,-24.6175 0/0:7:7,0:7:268:0:0:0,-2.10721,-24.4834 dDocent_Contig_13790 14 . A G 477.473 . AB=0.231579;ABP=62.4629;AC=2;AF=0.166667;AN=12;AO=33;CIGAR=1X;DP=560;DPB=560;DPRA=0.425698;EPP=74.6689;EPPR=1145.2;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.98289;PAO=0;PQA=0;PQR=0;PRO=0;QA=1315;QR=21122;RO=526;RPL=0;RPP=74.6689;RPPR=1145.2;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=526;SRP=1145.2;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:6,15:6:243:15:606:-48.557,0,-15.926 0/0:68:64,3:64:2580:3:117:0,-9.57398,-221.44 0/1:74:67,7:67:2707:7:270:-2.38316,0,-221.462 0/0:100:95,5:95:3782:5:200:0,-11.7235,-322.004 0/0:118:115,3:115:4607:3:122:0,-24.149,-403.175 0/0:179:179,0:179:7203:0:0:0,-53.8844,-647.901 dDocent_Contig_13791 15 . A T 492.644 . AB=0.244444;ABP=54.064;AC=3;AF=0.25;AN=12;AO=22;CIGAR=1X;DP=128;DPB=128;DPRA=2.36842;EPP=50.7827;EPPR=233.186;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.981132;PAO=0;PQA=0;PQR=0;PRO=0;QA=894;QR=4225;RO=106;RPL=0;RPP=50.7827;RPPR=233.186;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=106;SRP=233.186;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:8:8,0:8:320:0:0:0,-2.40824,-29.1675 0/0:13:13,0:13:530:0:0:0,-3.91339,-48.0466 0/1:15:8,7:8:320:7:286:-21.5994,0,-24.6515 0/0:17:17,0:17:655:0:0:0,-5.11751,-59.2694 0/1:35:25,10:25:990:10:404:-26.184,0,-78.8609 0/1:40:35,5:35:1410:5:204:-6.70283,0,-115.112 dDocent_Contig_13792 168 . A T 127.542 . AB=0.555556;ABP=3.25157;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=234;DPB=234;DPRA=0.60274;EPP=16.0391;EPPR=498.106;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.925439;PAO=0;PQA=0;PQR=0;PRO=0;QA=240;QR=9111;RO=228;RPL=6;RPP=16.0391;RPPR=498.106;RPR=0;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=498.106;SRR=228;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:59,0:59:2333:0:0:0,-17.7608,-210.131 0/0:79:78,1:78:3123:1:41:0,-19.6868,-277.049 0/0:75:75,0:75:3004:0:0:0,-22.5772,-270.441 0/0:12:12,0:12:490:0:0:0,-3.61236,-44.4511 0/1:4:2,2:2:80:2:79:-6.29351,0,-6.38767 0/1:5:2,3:2:81:3:120:-9.68254,0,-6.18058 dDocent_Contig_13793 10 . C T 582.393 . AB=0.136364;ABP=28.2783;AC=0;AF=0;AN=12;AO=4;CIGAR=1X3M2X;DP=104;DPB=104;DPRA=0;EPP=11.6962;EPPR=155.013;GTI=0;LEN=1;MEANALT=2;MQM=58;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0.928571;PAO=0;PQA=0;PQR=0;PRO=0;QA=160;QR=2757;RO=70;RPL=0;RPP=11.6962;RPPR=155.013;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=70;SRP=155.013;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:22:17,0,1,4:17:663:0,1,4:0,41,159:-7.96313,-13.0806,-67.5671,-9.69409,-64.1821,-63.8811,0,-54.4754,-51.0902,-53.2712 0|0:22:6,3,1,12:6:239:3,1,12:120,41,473:-37.1007,-29.0276,-47.8053,-35.5219,-45.3235,-54.9016,0,-9.79904,-16.2923,-16.0651 0|0:14:11,0,0,3:11:440:0,0,3:0,0,116:-6.60109,-9.91242,-46.1675,-9.91242,-46.1675,-46.1675,0,-36.6442,-36.6442,-35.7411 0|0:32:31,1,0,0:31:1218:1,0,0:40,0,0:0,-5.63979,-105.901,-9.33193,-106.202,-109.495,-9.33193,-106.202,-109.495,-109.495 0|0:4:2,0,1,1:2:80:0,1,1:0,41,41:-2.78202,-3.38408,-9.9693,0,-6.58357,-6.28254,0,-6.58357,-3.19619,-6.28254 0|0:10:3,0,4,3:3:117:0,4,3:0,162,122:-12.9166,-13.8197,-23.4325,-0.462281,-10.0715,-8.86738,-3.75571,-13.3668,0,-12.4637 dDocent_Contig_13794 11 . A C 110.129 . AB=0.162791;ABP=45.4803;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=320;DPB=320;DPRA=1.2695;EPP=24.725;EPPR=676.167;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.4;PAIREDR=0.551613;PAO=0;PQA=0;PQR=0;PRO=0;QA=402;QR=12440;RO=310;RPL=0;RPP=24.725;RPPR=676.167;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=310;SRP=676.167;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:37,0:37:1467:0:0:0,-11.1381,-132.28 0/0:66:64,2:64:2575:2:82:0,-12.0883,-224.095 0/0:27:27,0:27:1085:0:0:0,-8.12781,-97.937 0/0:70:69,1:69:2750:1:41:0,-16.9775,-243.522 0/1:43:36,7:36:1455:7:279:-12.5357,0,-118.251 0/0:77:77,0:77:3108:0:0:0,-23.1793,-279.786 dDocent_Contig_13795 19 . G A 1013.63 . AB=0.285714;ABP=61.6401;AC=2;AF=0.166667;AN=12;AO=42;CIGAR=2X;DP=659;DPB=659;DPRA=0.574219;EPP=94.2121;EPPR=1338.47;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1647;QR=24170;RO=615;RPL=0;RPP=94.2121;RPPR=1338.47;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=615;SRP=1338.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:101:65,36:65:2545:36:1423:-97.9194,0,-198.791 0|1:46:40,6:40:1551:6:224:-6.66575,0,-125.983 0|0:51:51,0:51:2021:0:0:0,-15.3525,-182.084 0|0:10:10,0:10:398:0:0:0,-3.0103,-36.1781 0|0:272:270,0:270:10580:0:0:0,-81.2781,-951.276 0|0:179:179,0:179:7075:0:0:0,-53.8844,-636.446 dDocent_Contig_13797 13 . G A 78.2784 . AB=0.12963;ABP=67.3502;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=225;DPB=225;DPRA=0.665385;EPP=29.068;EPPR=465.534;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=0.690141;PAO=0;PQA=0;PQR=0;PRO=0;QA=473;QR=8379;RO=213;RPL=0;RPP=29.068;RPPR=465.534;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=213;SRP=465.534;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:30,1:30:1147:1:41:0,-5.23736,-99.4162 0/0:52:52,0:52:2043:0:0:0,-15.6536,-184.062 0/1:24:22,2:22:875:2:82:-0.554958,0,-71.8338 0/0:57:54,3:54:2140:3:110:0,-6.89927,-182.522 0/0:31:30,1:30:1171:1:40:0,-5.33625,-101.677 0/1:30:25,5:25:1003:5:200:-9.34813,0,-81.5364 dDocent_Contig_13798 7 . A C 2110.91 . AB=0.379147;ABP=29.7781;AC=2;AF=0.166667;AN=12;AO=80;CIGAR=1X;DP=613;DPB=613;DPRA=1.04975;EPP=176.728;EPPR=1156.06;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.775;PAIREDR=0.72693;PAO=0;PQA=0;PQR=0;PRO=0;QA=3081;QR=20308;RO=531;RPL=0;RPP=176.728;RPPR=1156.06;RPR=80;RUN=1;SAF=80;SAP=176.728;SAR=0;SRF=531;SRP=1156.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:91:91,0:91:3508:0:0:0,-27.3937,-315.844 0/0:101:101,0:101:3876:0:0:0,-30.404,-348.944 0/0:105:104,0:104:3945:0:0:0,-31.3071,-355.05 0/0:105:104,0:104:3987:0:0:0,-31.3071,-358.556 0/1:84:49,35:49:1880:35:1337:-95.3288,0,-144.161 0/1:127:82,45:82:3112:45:1744:-118.984,0,-242 dDocent_Contig_13799 25 . C T 768.388 . AB=0.386667;ABP=11.3777;AC=1;AF=0.0833333;AN=12;AO=34;CIGAR=1X;DP=457;DPB=457;DPRA=1.20773;EPP=76.8404;EPPR=921.543;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1301;QR=16434;RO=423;RPL=0;RPP=76.8404;RPPR=921.543;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=423;SRP=921.543;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:75:46,29:46:1804:29:1115:-78.0607,0,-140.021 0/0:80:78,2:78:3021:2:74:0,-17.0566,-265.005 0/0:95:92,3:92:3573:3:112:0,-18.1551,-311.206 0/0:47:47,0:47:1831:0:0:0,-14.1484,-165.023 0/0:72:72,0:72:2782:0:0:0,-21.6742,-250.534 0/0:88:88,0:88:3423:0:0:0,-26.4906,-308.164 dDocent_Contig_13800 33 . A C 1472.85 . AB=0.24;ABP=17.6895;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=7M1X17M;DP=116;DPB=115.88;DPRA=0;EPP=16.0391;EPPR=115.927;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=0.826923;PAO=0;PQA=0;PQR=0;PRO=0;QA=211;QR=2041;RO=52;RPL=0;RPP=16.0391;RPPR=115.927;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=52;SRP=115.927;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:14:11,0,0,2,0:11:438:0,0,2,0:0,0,77,0:-2.99425,-6.30558,-42.3769,-6.30558,-42.3769,-42.3769,0,-36.0568,-36.0568,-35.4547,-6.30558,-42.3769,-42.3769,-36.0568,-42.3769 0|1:25:0,0,3,15,6:0:0:0,3,15,6:0,118,592,211:-65.8546,-65.8546,-65.8546,-56.1478,-56.1478,-55.2447,-17.1339,-17.1339,-7.41831,-12.6184,-48.7036,-48.7036,-38.9984,0,-46.8975 0|0:16:12,0,0,4,0:12:470:0,0,4,0:0,0,153,0:-9.32372,-12.9361,-51.5909,-12.9361,-51.5909,-51.5909,0,-39.0392,-39.0392,-37.8351,-12.9361,-51.5909,-51.5909,-39.0392,-51.5909 0|0:13:3,0,0,9,0:3:118:0,0,9,0:0,0,361,0:-28.8332,-29.7362,-39.4411,-29.7362,-39.4411,-39.4411,0,-9.69446,-9.69446,-6.98519,-29.7362,-39.4411,-39.4411,-9.69446,-39.4411 0|0:30:17,0,0,12,0:17:664:0,0,12,0:0,0,487,0:-35.0518,-40.1693,-94.7463,-40.1693,-94.7463,-94.7463,0,-54.5765,-54.5765,-50.9642,-40.1693,-94.7463,-94.7463,-54.5765,-94.7463 0|0:18:9,2,0,6,0:9:351:2,0,6,0:71,0,233,0:-16.4426,-13.3756,-41.6242,-19.1518,-42.2263,-48.0066,0,-23.0858,-28.8639,-27.0577,-19.1518,-42.2263,-48.0066,-28.8639,-48.0066 dDocent_Contig_13801 16 . C T 320.005 . AB=0.152174;ABP=148.027;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1X;DP=344;DPB=344;DPRA=1.08485;EPP=52.9542;EPPR=697.881;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=59.1562;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.98125;PAO=0;PQA=0;PQR=0;PRO=0;QA=927;QR=12729;RO=320;RPL=0;RPP=52.9542;RPPR=697.881;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=320;SRP=697.881;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:45:38,7:38:1497:7:284:-12.3874,0,-121.428 0/0:70:70,0:70:2783:0:0:0,-21.0721,-250.581 0/0:41:38,2:38:1518:2:82:0,-4.67098,-122.231 0/1:93:79,14:79:3142:14:561:-22.8349,0,-248.291 0/0:32:32,0:32:1298:0:0:0,-9.63296,-117.081 0/0:63:63,0:63:2491:0:0:0,-18.9649,-224.338 dDocent_Contig_13802 9 . G A 147.94 . AB=0.475;ABP=3.44459;AC=3;AF=0.25;AN=12;AO=46;CIGAR=1X;DP=165;DPB=165;DPRA=1.25532;EPP=102.898;EPPR=261.416;GTI=0;LEN=1;MEANALT=1;MQM=15.0652;MQMR=59.8319;NS=6;NUMALT=1;ODDS=0;PAIRED=0.152174;PAIREDR=0.932773;PAO=0;PQA=0;PQR=0;PRO=0;QA=1775;QR=4546;RO=119;RPL=0;RPP=102.898;RPPR=261.416;RPR=46;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=119;SRP=261.416;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:38:30,8:30:1146:8:312:0,-6.33074,-98.3189 0/1:31:20,11:20:765:11:414:-6.1125,0,-59.8336 0/1:28:12,16:12:456:16:623:-10.3192,0,-32.9591 0/1:21:10,11:10:387:11:426:-3.58218,0,-28.866 0/0:24:24,0:24:921:0:0:0,-7.22472,-83.2072 0/0:23:23,0:23:871:0:0:0,-6.92369,-78.709 dDocent_Contig_13803 33 . G A 72.1396 . AB=0.190476;ABP=20.4855;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=160;DPB=160;DPRA=1.02532;EPP=16.0391;EPPR=337.417;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.166667;PAIREDR=0.577922;PAO=0;PQA=0;PQR=0;PRO=0;QA=240;QR=6149;RO=154;RPL=0;RPP=16.0391;RPPR=337.417;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=154;SRP=337.417;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:22:22,0:22:876:0:0:0,-6.62266,-79.1512 0/0:16:15,1:15:596:1:36:0,-1.2182,-50.3796 0/1:21:17,4:17:672:4:163:-8.7368,0,-54.4886 0/0:44:43,1:43:1716:1:41:0,-9.15075,-150.565 0/0:35:35,0:35:1401:0:0:0,-10.536,-126.346 0/0:22:22,0:22:888:0:0:0,-6.62266,-80.2279 dDocent_Contig_13804 53 . C T 1112.13 . AB=0.157044;ABP=445.374;AC=2;AF=0.166667;AN=12;AO=69;CIGAR=1X;DP=1228;DPB=1228;DPRA=0.980645;EPP=152.842;EPPR=2517.58;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.991364;PAO=0;PQA=0;PQR=0;PRO=0;QA=2754;QR=45732;RO=1158;RPL=69;RPP=152.842;RPPR=2517.58;RPR=0;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=1158;SRP=2517.58;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:183:183,0:183:7230:0:0:0,-55.0885,-650.388 0/0:175:173,1:173:6858:1:40:0,-48.7333,-612.984 0/0:199:199,0:199:7829:0:0:0,-59.905,-704.245 0/0:238:238,0:238:9466:0:0:0,-71.6451,-851.382 0/1:212:183,29:183:7231:29:1159:-40.775,0,-586.653 0/1:221:182,39:182:7118:39:1555:-73.6601,0,-573.821 dDocent_Contig_13806 20 . G T 35.7513 . AB=0.0932203;ABP=172.606;AC=1;AF=0.0833333;AN=12;AO=26;CIGAR=1X;DP=781;DPB=781;DPRA=1.41422;EPP=59.4686;EPPR=1625.1;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=59.842;NS=6;NUMALT=1;ODDS=0;PAIRED=0.384615;PAIREDR=0.329317;PAO=0;PQA=0;PQR=0;PRO=0;QA=1017;QR=29809;RO=747;RPL=0;RPP=59.4686;RPPR=1625.1;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=747;SRP=1625.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:118:105,11:105:4177:11:441:-4.79686,0,-340.497 0/0:104:102,0:102:4114:0:0:0,-30.7051,-369.814 0/0:100:97,0:97:3889:0:0:0,-29.1999,-349.598 0/0:139:132,6:132:5212:6:222:0,-21.619,-448.635 0/0:168:166,2:166:6648:2:82:0,-42.7934,-589.868 0/0:152:145,7:145:5769:7:272:0,-20.917,-493.936 dDocent_Contig_13807 24 . G A 2148.11 . AB=0.48125;ABP=3.49888;AC=6;AF=0.5;AN=12;AO=77;CIGAR=1X;DP=160;DPB=160;DPRA=0;EPP=170.214;EPPR=183.243;GTI=0;LEN=1;MEANALT=1;MQM=59.5325;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.922078;PAIREDR=0.915663;PAO=0;PQA=0;PQR=0;PRO=0;QA=3025;QR=3343;RO=83;RPL=0;RPP=170.214;RPPR=183.243;RPR=77;RUN=1;SAF=77;SAP=170.214;SAR=0;SRF=83;SRP=183.243;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:29:19,10:19:760:10:386:-26.3612,0,-59.9909 0/1:27:7,20:7:283:20:783:-62.6253,0,-17.7158 0/1:20:11,9:11:440:9:346:-25.4744,0,-33.9329 0/1:20:12,8:12:481:8:320:-23.1469,0,-37.6205 0/1:38:23,15:23:933:15:597:-42.5704,0,-72.8328 0/1:26:11,15:11:446:15:593:-45.8549,0,-32.6688 dDocent_Contig_13808 11 . T C 550.044 . AB=0.26087;ABP=48.7056;AC=4;AF=0.333333;AN=12;AO=25;CIGAR=1X;DP=142;DPB=142;DPRA=1.47059;EPP=57.2971;EPPR=257.073;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.957265;PAO=0;PQA=0;PQR=0;PRO=0;QA=1016;QR=4664;RO=117;RPL=0;RPP=57.2971;RPPR=257.073;RPR=25;RUN=1;SAF=25;SAP=57.2971;SAR=0;SRF=117;SRP=257.073;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:32,1:32:1266:1:40:0,-5.93831,-110.216 0/1:21:19,2:19:757:2:82:-1.45805,0,-62.1253 0/1:12:9,3:9:352:3:122:-7.76013,0,-28.422 0/1:35:30,5:30:1210:5:204:-8.20798,0,-98.6381 0/0:17:17,0:17:678:0:0:0,-5.11751,-61.35 0/1:24:10,14:10:401:14:568:-44.2378,0,-29.2228 dDocent_Contig_13809 41 . A C 57.8201 . AB=0.131579;ABP=47.8112;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=171;DPB=171;DPRA=1.42857;EPP=13.8677;EPPR=363.475;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=0.783133;PAO=0;PQA=0;PQR=0;PRO=0;QA=204;QR=6599;RO=166;RPL=0;RPP=13.8677;RPPR=363.475;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=166;SRP=363.475;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:11:11,0:11:436:0:0:0,-3.31133,-39.5897 0/0:31:31,0:31:1247:0:0:0,-9.33193,-112.499 0/0:19:19,0:19:752:0:0:0,-5.71957,-68.0008 0/0:47:47,0:47:1880:0:0:0,-14.1484,-169.407 0/1:38:33,5:33:1284:5:204:-7.30489,0,-104.392 0/0:25:25,0:25:1000:0:0:0,-7.52575,-90.2937 dDocent_Contig_13810 17 . C T 88.3127 . AB=0.140845;ABP=82.5596;AC=3;AF=0.25;AN=12;AO=10;CIGAR=1X;DP=125;DPB=125;DPRA=1.31481;EPP=24.725;EPPR=252.73;GTI=0;LEN=1;MEANALT=1;MQM=52.4;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.895652;PAO=0;PQA=0;PQR=0;PRO=0;QA=396;QR=4612;RO=115;RPL=0;RPP=24.725;RPPR=252.73;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=115;SRP=252.73;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:21,4:21:850:4:157:-6.98067,0,-69.2834 0/0:22:22,0:22:876:0:0:0,-6.62266,-79.1458 0/1:19:17,2:17:680:2:82:-0.25514,0,-55.8111 0/1:27:23,4:23:917:4:157:-5.07109,0,-74.7052 0/0:18:18,0:18:722:0:0:0,-5.41854,-65.3042 0/0:14:14,0:14:567:0:0:0,-4.21442,-51.3727 dDocent_Contig_13811 13 . G A 108.78 . AB=0.333333;ABP=6.62942;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=98;DPB=98;DPRA=0.903614;EPP=13.8677;EPPR=141.448;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.827957;PAO=0;PQA=0;PQR=0;PRO=0;QA=184;QR=3532;RO=93;RPL=0;RPP=13.8677;RPPR=204.957;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=85;SRP=141.448;SRR=8;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:788:0:0:0,-6.32163,-71.2427 0/0:30:30,0:30:1138:0:0:0,-9.0309,-102.72 0/0:11:11,0:11:413:0:0:0,-3.31133,-37.5178 0/0:17:17,0:17:642:0:0:0,-5.11751,-58.1155 0/0:4:4,0:4:156:0:0:0,-1.20412,-14.4173 0/1:15:10,5:10:395:5:184:-12.4008,0,-31.3928 dDocent_Contig_13812 42 . C T 47.0285 . AB=0.3;ABP=6.48466;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=54;DPB=54;DPRA=1.13636;EPP=9.52472;EPPR=113.755;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=99;QR=2025;RO=51;RPL=0;RPP=9.52472;RPPR=113.755;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=51;SRP=113.755;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:365:0:0:0,-2.70927,-33.2145 0/0:5:5,0:5:202:0:0:0,-1.50515,-18.5621 0/0:6:6,0:6:238:0:0:0,-1.80618,-21.791 0/0:11:11,0:11:416:0:0:0,-3.31133,-37.7718 0/1:10:7,3:7:282:3:99:-6.22568,0,-22.7423 0/0:13:13,0:13:522:0:0:0,-3.91339,-47.3258 dDocent_Contig_13813 7 . A T 104.64 . AB=0.163636;ABP=57.0602;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=158;DPB=158;DPRA=1.06796;EPP=22.5536;EPPR=324.388;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.5;PAO=0;PQA=0;PQR=0;PRO=0;QA=329;QR=5642;RO=148;RPL=0;RPP=22.5536;RPPR=324.388;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=148;SRP=324.388;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:752:0:0:0,-6.0206,-68.0012 0/1:34:28,6:28:1056:6:212:-9.18554,0,-85.1086 0/0:14:14,0:14:543:0:0:0,-4.21442,-49.216 0/0:33:33,0:33:1260:0:0:0,-9.93399,-113.692 0/0:36:36,0:36:1375:0:0:0,-10.8371,-124.033 0/1:21:17,3:17:656:3:117:-4.50012,0,-52.9667 dDocent_Contig_13814 35 . G A 1528.78 . AB=0.857143;ABP=34.0313;AC=3;AF=0.25;AN=12;AO=46;CIGAR=1X;DP=216;DPB=216;DPRA=0.60241;EPP=102.898;EPPR=372.161;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.976471;PAO=0;PQA=0;PQR=0;PRO=0;QA=1799;QR=6737;RO=170;RPL=0;RPP=102.898;RPPR=372.161;RPR=46;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=170;SRP=372.161;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1187:0:0:0,-9.0309,-107.114 0/0:45:45,0:45:1787:0:0:0,-13.5463,-161.057 0/0:41:41,0:41:1623:0:0:0,-12.3422,-146.313 0/0:50:50,0:50:1987:0:0:0,-15.0515,-179.039 1/1:22:0,22:0:0:22:857:-77.4415,-6.62266,0 0/1:28:4,24:4:153:24:942:-76.6582,0,-5.71247 dDocent_Contig_13815 15 . G A 87.409 . AB=0.157895;ABP=41.6397;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=293;DPB=293;DPRA=0.993197;EPP=22.5536;EPPR=619.708;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=354;QR=11335;RO=284;RPL=0;RPP=22.5536;RPPR=619.708;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=284;SRP=619.708;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:50:50,0:50:1984:0:0:0,-15.0515,-178.759 0/0:52:52,0:52:2074:0:0:0,-15.6536,-186.844 0/0:50:48,2:48:1927:2:78:0,-7.6482,-166.219 0/0:58:57,1:57:2301:1:39:0,-13.5632,-203.349 0/1:38:32,6:32:1273:6:237:-10.2638,0,-103.401 0/0:45:45,0:45:1776:0:0:0,-13.5463,-160.061 dDocent_Contig_13816 98 . N A 301.169 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=10;CIGAR=1X;DP=10;DPB=10;DPRA=0;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=319;QR=0;RO=0;RPL=10;RPP=24.725;RPPR=0;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:69:-6.55266,-0.60206,0 1/1:6:0,6:0:0:6:197:-18.0527,-1.80618,0 1/1:2:0,2:0:0:2:53:-5.03367,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_13817 107 . N C 136.676 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=142;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-6.6474,-0.60206,0 1/1:3:0,3:0:0:3:72:-6.71838,-0.90309,0 dDocent_Contig_13818 28 . C T 273.345 . AB=0.194444;ABP=61.3988;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=192;DPB=192;DPRA=1.2;EPP=33.4109;EPPR=389.532;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.571429;PAIREDR=0.831461;PAO=0;PQA=0;PQR=0;PRO=0;QA=572;QR=7176;RO=178;RPL=0;RPP=33.4109;RPPR=389.532;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=178;SRP=389.532;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:970:0:0:0,-7.22472,-87.599 0/1:29:25,4:25:1008:4:164:-6.42003,0,-82.2842 0/0:31:31,0:31:1249:0:0:0,-9.33193,-112.68 0/1:43:33,10:33:1325:10:408:-24.1363,0,-106.562 0/0:32:32,0:32:1293:0:0:0,-9.63296,-116.626 0/0:33:33,0:33:1331:0:0:0,-9.93399,-120.05 dDocent_Contig_13819 11 . G A 94.1223 . AB=0.292308;ABP=27.3642;AC=2;AF=0.166667;AN=12;AO=19;CIGAR=1M9I2M1X1M1X;DP=193;DPB=221.5;DPRA=1.01562;EPP=44.2683;EPPR=356.96;GTI=0;LEN=1;MEANALT=2.5;MQM=18;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=748;QR=6228;RO=163;RPL=0;RPP=44.2683;RPPR=356.96;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=163;SRP=356.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:22:19,0:19:737:0:0:0,-5.71957,-66.2576 0|0:50:48,0:48:1830:0:0:0,-14.4494,-164.551 0|1:38:24,11:24:923:11:437:-7.07442,0,-72.4428 0|1:27:16,8:16:610:8:311:-5.55964,0,-47.6328 0|0:33:33,0:33:1258:0:0:0,-9.93399,-113.513 0|0:23:23,0:23:870:0:0:0,-6.92369,-78.6201 dDocent_Contig_13820 48 . G A 55.2073 . AB=0.153846;ABP=16.5402;AC=3;AF=0.25;AN=12;AO=4;CIGAR=1X;DP=67;DPB=67;DPRA=0.576923;EPP=3.0103;EPPR=85.7675;GTI=0;LEN=1;MEANALT=1;MQM=27;MQMR=53.0635;NS=6;NUMALT=1;ODDS=8.67362e-19;PAIRED=0;PAIREDR=0.777778;PAO=0;PQA=0;PQR=0;PRO=0;QA=136;QR=2365;RO=63;RPL=4;RPP=11.6962;RPPR=45.2334;RPR=0;RUN=1;SAF=2;SAP=3.0103;SAR=2;SRF=56;SRP=85.7675;SRR=7;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:6:6,0:6:217:0:0:0,-1.80618,-17.3258 1/1:2:0,2:0:0:2:73:-5.03793,-0.60206,0 0/0:22:22,0:22:834:0:0:0,-6.62266,-75.3812 0/1:13:11,2:11:425:2:63:-0.882153,0,-31.3698 0/0:13:13,0:13:485:0:0:0,-3.91339,-42.1847 0/0:11:11,0:11:404:0:0:0,-3.31133,-32.5002 dDocent_Contig_13821 107 . N A 3360.35 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=107;CIGAR=1X;DP=107;DPB=107;DPRA=0;EPP=235.358;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=3.38813e-21;PAIRED=0.934579;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3712;QR=0;RO=0;RPL=0;RPP=235.358;RPPR=0;RPR=107;RUN=1;SAF=0;SAP=235.358;SAR=107;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:101:-9.4236,-0.90309,0 ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:35:-3.49863,-0.30103,0 1/1:49:0,49:0:0:49:1706:-153.83,-14.7505,0 1/1:54:0,54:0:0:54:1870:-168.583,-16.2556,0 dDocent_Contig_13822 54 . G A 232.62 . AB=0.194805;ABP=65.3062;AC=3;AF=0.25;AN=12;AO=15;CIGAR=1X2M1X;DP=111;DPB=111;DPRA=2.26471;EPP=35.5824;EPPR=211.472;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.864583;PAO=0;PQA=0;PQR=0;PRO=0;QA=562;QR=3490;RO=96;RPL=10;RPP=6.62942;RPPR=3.10078;RPR=5;RUN=1;SAF=10;SAP=6.62942;SAR=5;SRF=49;SRP=3.10078;SRR=47;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:22:19,3:19:693:3:112:-3.82407,0,-56.0757 0|0:14:14,0:14:506:0:0:0,-4.21442,-45.8761 0|1:21:15,6:15:553:6:232:-14.9246,0,-43.784 0|1:34:28,6:28:1021:6:218:-9.73404,0,-81.9643 0|0:10:10,0:10:362:0:0:0,-3.0103,-32.9234 0|0:10:10,0:10:355:0:0:0,-3.0103,-32.289 dDocent_Contig_13823 45 . G T 11275.1 . AB=0;ABP=0;AC=4;AF=0.333333;AN=12;AO=318;CIGAR=1X;DP=751;DPB=751;DPRA=1.49302;EPP=693.539;EPPR=943.258;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=12649;QR=17169;RO=433;RPL=0;RPP=693.539;RPPR=943.258;RPR=318;RUN=1;SAF=318;SAP=693.539;SAR=0;SRF=433;SRP=943.258;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:73:73,0:73:2899:0:0:0,-21.9752,-261.017 0/0:166:166,0:166:6583:0:0:0,-49.971,-592.204 0/0:80:80,0:80:3168:0:0:0,-24.0824,-285.202 0/0:111:111,0:111:4399:0:0:0,-33.4143,-395.87 1/1:133:0,133:0:0:133:5264:-473.622,-40.037,0 1/1:188:3,185:3:120:185:7385:-653.112,-45.4057,0 dDocent_Contig_13825 125 . G A 44.2394 . AB=0.127907;ABP=106.433;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=141;DPB=141;DPRA=34.75;EPP=33.4109;EPPR=278.787;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.968504;PAO=0;PQA=0;PQR=0;PRO=0;QA=437;QR=4319;RO=127;RPL=0;RPP=33.4109;RPPR=278.787;RPR=14;RUN=1;SAF=0;SAP=33.4109;SAR=14;SRF=0;SRP=278.787;SRR=127;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:31,1:31:1059:1:33:0,-6.33382,-92.3177 0/1:51:44,7:44:1502:7:233:-5.94374,0,-120.119 0/1:35:31,4:31:1058:4:116:-0.190142,0,-84.991 0/0:21:19,2:19:647:2:55:0,-1.09797,-53.3265 0/0:1:1,0:1:35:0:0:0,-0.30103,-3.49863 0/0:1:1,0:1:18:0:0:0,-0.30103,-1.79997 dDocent_Contig_13827 61 . A G 829.662 . AB=0.416667;ABP=7.35324;AC=2;AF=0.166667;AN=12;AO=30;CIGAR=1X;DP=102;DPB=102;DPRA=4.8;EPP=68.1545;EPPR=159.356;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.333333;PAIREDR=0.986111;PAO=0;PQA=0;PQR=0;PRO=0;QA=1191;QR=2805;RO=72;RPL=30;RPP=68.1545;RPPR=159.356;RPR=0;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=72;SRP=159.356;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:3:3,0:3:93:0:0:0,-0.90309,-8.67237 0/0:5:5,0:5:185:0:0:0,-1.50515,-17.002 0/0:15:15,0:15:577:0:0:0,-4.51545,-52.2605 0/0:7:7,0:7:284:0:0:0,-2.10721,-25.934 0/1:45:19,26:19:741:26:1034:-79.8093,0,-53.4653 0/1:27:23,4:23:925:4:157:-6.37861,0,-75.4268 dDocent_Contig_13828 18 . C T 4481.72 . AB=0.406417;ABP=31.4601;AC=5;AF=0.416667;AN=12;AO=152;CIGAR=3M1X4M;DP=374;DPB=374;DPRA=0;EPP=333.074;EPPR=356.96;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6028;QR=6365;RO=163;RPL=0;RPP=333.074;RPPR=356.96;RPR=152;RUN=1;SAF=152;SAP=333.074;SAR=0;SRF=163;SRP=356.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:47:26,0,10,6,5:26:1013:0,10,6,5:0,383,233,203:-23.595,-31.4218,-114.677,0,-83.2504,-80.2401,-12.2787,-95.5331,-64.1072,-93.727,-14.6745,-97.9324,-66.5057,-78.7885,-96.4272 0|1:65:31,0,5,26,2:31:1216:0,5,26,2:0,202,1031,81:-75.5253,-84.8572,-184.855,-68.2029,-168.201,-166.696,0,-99.994,-83.3393,-92.1672,-78.1776,-178.175,-161.521,-93.3142,-177.573 0|1:49:26,0,0,21,2:26:1005:0,0,21,2:0,0,852,82:-62.4335,-70.2603,-152.788,-70.2603,-152.788,-152.788,0,-82.5168,-82.5168,-76.1952,-63.4917,-146.02,-146.02,-75.747,-145.418 0|1:57:37,0,0,13,6:37:1451:0,0,13,6:0,0,519,232:-31.6128,-42.7509,-162.071,-42.7509,-162.071,-162.071,0,-119.325,-119.325,-115.411,-23.7013,-143.018,-143.018,-100.272,-141.212 0|1:71:25,7,0,39,0:25:979:7,0,39,0:275,0,1553,0:-120.349,-105.257,-183.644,-127.875,-185.751,-208.37,0,-57.8774,-80.4964,-68.7563,-127.875,-185.751,-208.37,-80.4964,-208.37 0|1:85:18,17,0,47,0:18:701:17,0,47,0:667,0,1840,0:-145.879,-96.4401,-148.937,-151.297,-154.055,-208.911,0,-2.75706,-57.6236,-43.4752,-151.297,-154.055,-208.911,-57.6236,-208.911 dDocent_Contig_13829 28 . T A 614.988 . AB=0.0714286;ABP=70.0157;AC=3;AF=0.25;AN=12;AO=5;CIGAR=2M2D1M1X;DP=147;DPB=128.333;DPRA=9.25;EPP=13.8677;EPPR=191.928;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=186;QR=3371;RO=87;RPL=0;RPP=13.8677;RPPR=191.928;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=87;SRP=191.928;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:28:21,0,0,0,5,1:21:814:0,0,0,5,1:0,0,0,201,41:-10.3506,-16.6723,-83.562,-16.6723,-83.562,-83.562,-16.6723,-83.562,-83.562,-83.562,0,-66.9935,-66.9935,-66.9935,-65.4884,-13.2796,-80.1769,-80.1769,-80.1769,-63.6079,-79.8758 0|0:32:26,2,2,0,2,0:26:1022:2,2,0,2,0:80,70,0,82,0:0,-1.22998,-84.703,-2.15014,-79.6132,-85.6017,-7.82678,-85.3051,-86.2037,-91.8958,-1.04703,-78.5356,-79.4345,-85.1264,-84.5244,-7.82678,-85.3051,-86.2037,-91.8958,-85.1264,-91.8958 0|0:42:15,5,3,2,10,7:15:586:5,3,2,10,7:203,116,75,402,277:-28.6155,-16.3868,-63.053,-23.6049,-55.0313,-70.872,-26.9906,-58.4171,-65.6341,-74.5587,0,-31.4268,-38.6446,-42.0305,-45.1611,-10.3348,-41.7609,-48.9783,-52.3641,-25.3738,-56.3977 0|0:37:22,6,0,2,7,0:22:830:6,0,2,7,0:238,0,73,278,0:-16.2662,-3.29482,-69.4952,-22.8889,-71.3013,-90.8953,-16.9307,-65.34,-84.9339,-84.3319,0,-48.4116,-68.0071,-62.0458,-65.8999,-22.8889,-71.3013,-90.8953,-84.9339,-68.0071,-90.8953 1|1:4:0,3,0,0,0,0:0:0:3,0,0,0,0:120,0,0,0,0:-10.7807,-0.90309,0,-10.7807,-0.90309,-10.7807,-10.7807,-0.90309,-10.7807,-10.7807,-10.7807,-0.90309,-10.7807,-10.7807,-10.7807,-10.7807,-0.90309,-10.7807,-10.7807,-10.7807,-10.7807 0|1:4:3,1,0,0,0,0:3:119:1,0,0,0,0:39,0,0,0,0:-2.69244,0,-9.89127,-3.59553,-10.1923,-13.3965,-3.59553,-10.1923,-13.3965,-13.3965,-3.59553,-10.1923,-13.3965,-13.3965,-13.3965,-3.59553,-10.1923,-13.3965,-13.3965,-13.3965,-13.3965 dDocent_Contig_13830 33 . C T 904.202 . AB=0.237288;ABP=109.118;AC=5;AF=0.416667;AN=12;AO=43;CIGAR=1X;DP=194;DPB=194;DPRA=0;EPP=87.8997;EPPR=297.079;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.581395;PAIREDR=0.556291;PAO=0;PQA=0;PQR=0;PRO=0;QA=1717;QR=5998;RO=151;RPL=0;RPP=96.3836;RPPR=330.903;RPR=43;RUN=1;SAF=42;SAP=87.8997;SAR=1;SRF=147;SRP=297.079;SRR=4;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:19,3:19:763:3:115:-4.09972,0,-62.3665 0/1:42:32,10:32:1273:10:399:-23.6245,0,-102.193 0/0:17:16,1:16:623:1:38:0,-1.32024,-52.5981 0/1:16:12,4:12:483:4:162:-10.1505,0,-39.0053 0/1:49:41,8:41:1624:8:320:-14.4161,0,-131.646 0/1:48:31,17:31:1232:17:683:-47.3507,0,-96.7039 dDocent_Contig_13831 49 . C T 39.1243 . AB=0.116279;ABP=58.0041;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=300;DPB=300;DPRA=0.851852;EPP=20.3821;EPPR=637.08;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.414384;PAO=0;PQA=0;PQR=0;PRO=0;QA=319;QR=11638;RO=292;RPL=0;RPP=20.3821;RPPR=637.08;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=292;SRP=637.08;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1391:0:0:0,-10.536,-125.448 0/0:54:54,0:54:2160:0:0:0,-16.2556,-194.578 0/0:45:44,1:44:1757:1:38:0,-9.74908,-154.553 0/0:73:73,0:73:2927:0:0:0,-21.9752,-263.524 0/0:50:48,2:48:1887:2:81:0,-7.36577,-162.351 0/1:43:38,5:38:1516:5:200:-5.43525,0,-123.741 dDocent_Contig_13837 18 . G C 20890.8 . AB=0.510269;ABP=3.59005;AC=8;AF=0.666667;AN=12;AO=642;CIGAR=1X1M;DP=952;DPB=952;DPRA=0;EPP=1397.1;EPPR=643.595;GTI=0;LEN=1;MEANALT=1.33333;MQM=59.3629;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.987539;PAIREDR=0.99661;PAO=0;PQA=0;PQR=0;PRO=0;QA=25402;QR=11384;RO=295;RPL=0;RPP=1397.1;RPPR=643.595;RPR=642;RUN=1;SAF=642;SAP=1397.1;SAR=0;SRF=295;SRP=643.595;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:116:11,0,104:11:413:0,104:0,4129:-336.231,-339.542,-373.364,0,-34.067,-2.75991 0|1:133:54,0,79:54:2091:0,79:0,3111:-239.014,-255.269,-427.021,0,-172.141,-148.359 0|1:164:125,0,39:125:4824:0,39:0,1528:-88.3887,-126.017,-522.147,0,-396.519,-384.779 0|1:220:105,14,101:105:4056:14,101:567,3981:-295.193,-280.046,-608.931,0,-286.33,-302.683 1|1:116:0,0,116:0:0:0,116:0,4591:-412.55,-412.55,-412.55,-34.9195,-34.9195,0 1|1:203:0,0,203:0:0:0,203:0,8062:-724.915,-724.915,-724.915,-61.1091,-61.1091,0 dDocent_Contig_13838 30 . G T 54.2878 . AB=0.106667;ABP=103.796;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=236;DPB=236;DPRA=1.57576;EPP=24.725;EPPR=493.763;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=406;QR=8994;RO=226;RPL=0;RPP=24.725;RPPR=493.763;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=226;SRP=493.763;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:733:0:0:0,-5.71957,-66.2828 0/0:29:27,2:27:1082:2:82:0,-0.950192,-89.8837 0/1:75:67,8:67:2658:8:324:-6.95157,0,-216.766 0/0:34:34,0:34:1358:0:0:0,-10.235,-122.48 0/0:42:42,0:42:1675:0:0:0,-12.6433,-150.976 0/0:37:37,0:37:1488:0:0:0,-11.1381,-134.162 dDocent_Contig_13839 21 . T A 90.202 . AB=0.25;ABP=11.6962;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=122;DPB=122;DPRA=1.83333;EPP=22.5536;EPPR=248.387;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.333333;PAIREDR=0.690265;PAO=0;PQA=0;PQR=0;PRO=0;QA=358;QR=4507;RO=113;RPL=0;RPP=22.5536;RPPR=248.387;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=113;SRP=248.387;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:12,4:12:476:4:163:-10.2419,0,-38.3753 0/0:33:31,2:31:1254:2:81:0,-2.24826,-105.443 0/0:16:15,1:15:590:1:38:0,-1.01921,-49.6377 0/0:27:26,1:26:1016:1:36:0,-4.52953,-88.1346 0/0:18:17,1:17:686:1:40:0,-1.42286,-58.0745 0/0:12:12,0:12:485:0:0:0,-3.61236,-44.0018 dDocent_Contig_13841 62 . G T 355.141 . AB=0.205128;ABP=91.3725;AC=3;AF=0.25;AN=12;AO=32;CIGAR=1X;DP=206;DPB=206;DPRA=0;EPP=72.4974;EPPR=380.846;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.9375;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1085;QR=6663;RO=174;RPL=32;RPP=72.4974;RPPR=380.846;RPR=0;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=174;SRP=380.846;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:53:48,5:48:1821:5:168:0,-0.506334,-148.69 0/1:32:26,6:26:927:6:206:-9.24231,0,-74.091 0/1:46:34,12:34:1327:12:433:-25.4585,0,-105.847 0/0:12:11,1:11:437:1:17:0,-1.91238,-37.9834 0/0:24:22,2:22:852:2:67:0,-0.861877,-70.6204 0/1:39:33,6:33:1299:6:194:-6.03472,0,-105.444 dDocent_Contig_13842 39 . C T 169.872 . AB=0.176471;ABP=64.8334;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=255;DPB=255;DPRA=0.584615;EPP=35.5824;EPPR=524.164;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.4;PAIREDR=0.4125;PAO=0;PQA=0;PQR=0;PRO=0;QA=559;QR=9522;RO=240;RPL=0;RPP=35.5824;RPPR=524.164;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=240;SRP=524.164;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:47:39,8:39:1535:8:287:-12.0221,0,-124.239 0/0:46:45,1:45:1790:1:40:0,-9.8517,-157.321 0/1:21:17,4:17:691:4:157:-8.18696,0,-56.1966 0/0:30:29,1:29:1144:1:37:0,-5.33307,-99.5338 0/0:46:45,1:45:1750:1:38:0,-10.0501,-153.922 0/0:65:65,0:65:2612:0:0:0,-19.5669,-235.206 dDocent_Contig_13843 7 . A C 167.528 . AB=0.120603;ABP=251.813;AC=3;AF=0.25;AN=12;AO=32;CIGAR=1X;DP=419;DPB=419;DPRA=0;EPP=72.4974;EPPR=839.027;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.96875;PAIREDR=0.955844;PAO=0;PQA=0;PQR=0;PRO=0;QA=1199;QR=14730;RO=385;RPL=0;RPP=72.4974;RPPR=839.027;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=385;SRP=839.027;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:56:53,3:53:2037:3:108:0,-6.78355,-173.489 0/0:78:76,2:76:2872:2:78:0,-16.0769,-251.256 0/1:58:51,7:51:1962:7:269:-7.11487,0,-159.36 0/0:86:81,3:81:3110:3:115:0,-14.8858,-269.37 0/1:64:56,8:56:2162:8:308:-8.81631,0,-175.538 0/1:77:68,9:68:2587:9:321:-6.04346,0,-209.853 dDocent_Contig_13844 7 . A C 283.279 . AB=0.526316;ABP=3.12459;AC=1;AF=0.0833333;AN=12;AO=21;CIGAR=1X;DP=470;DPB=470;DPRA=1.18644;EPP=48.6112;EPPR=975.83;GTI=0;LEN=1;MEANALT=1;MQM=58.8095;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.997768;PAO=0;PQA=0;PQR=0;PRO=0;QA=817;QR=17067;RO=448;RPL=0;RPP=48.6112;RPPR=975.83;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=448;SRP=975.83;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:9,10:9:345:10:388:-29.5497,0,-25.6886 0/0:156:145,11:145:5529:11:429:0,-8.00692,-458.644 0/0:38:38,0:38:1442:0:0:0,-11.4391,-130.06 0/0:147:146,0:146:5555:0:0:0,-43.9504,-499.619 0/0:83:83,0:83:3160:0:0:0,-24.9855,-284.562 0/0:27:27,0:27:1036:0:0:0,-8.12781,-93.5488 dDocent_Contig_13845 9 . G C 224.358 . AB=0.2;ABP=49.9141;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=306;DPB=306;DPRA=0.888889;EPP=37.7539;EPPR=632.737;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.862069;PAO=0;PQA=0;PQR=0;PRO=0;QA=617;QR=11047;RO=290;RPL=0;RPP=37.7539;RPPR=632.737;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=290;SRP=632.737;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:31,0:31:1167:0:0:0,-9.33193,-105.326 0/0:66:66,0:66:2523:0:0:0,-19.868,-227.272 0/0:46:45,1:45:1715:1:39:0,-9.95081,-150.708 0/0:65:65,0:65:2494:0:0:0,-19.5669,-224.656 0/0:38:35,3:35:1334:3:115:0,-0.714245,-109.622 0/1:60:48,12:48:1814:12:463:-23.9586,0,-145.449 dDocent_Contig_13846 15 . C T 31.1948 . AB=0.0881356;ABP=437.665;AC=1;AF=0.0833333;AN=12;AO=79;CIGAR=1X;DP=1371;DPB=1371;DPRA=0;EPP=149.488;EPPR=1564.88;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9969;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.157895;PAO=0;PQA=0;PQR=0;PRO=0;QA=3122;QR=50592;RO=1292;RPL=0;RPP=174.557;RPPR=2808.55;RPR=79;RUN=1;SAF=76;SAP=149.488;SAR=3;SRF=1128;SRP=1564.88;SRR=164;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:176:170,6:170:6678:6:242:0,-30.824,-578.6 0/0:298:281,17:281:11006:17:688:0,-27.4574,-927.633 0/0:157:150,7:150:5826:7:257:0,-23.7838,-500.715 0/1:295:269,26:269:10487:26:1035:-4.64203,0,-854.428 0/0:152:141,11:141:5533:11:432:0,-6.5265,-458.586 0/0:293:281,12:281:11062:12:468:0,-45.733,-952.41 dDocent_Contig_13847 10 . T C 2436.34 . AB=0.0588235;ABP=89.2305;AC=0;AF=0;AN=12;AO=3;CIGAR=1M1X13M;DP=244;DPB=236.333;DPRA=0;EPP=9.52472;EPPR=267.93;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.778689;PAO=0;PQA=0;PQR=0;PRO=0;QA=118;QR=4820;RO=122;RPL=0;RPP=9.52472;RPPR=267.93;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=122;SRP=267.93;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:45:20,4,21,0:20:783:4,21,0:132,791,0:-58.6666,-54.7926,-117.977,0,-54.5584,-58.1283,-64.6872,-119.181,-64.4499,-129.08 0|0:51:24,6,18,0:24:947:6,18,0:204,694,0:-49.5048,-41.8143,-117.941,0,-63.0692,-72.566,-56.7295,-119.747,-77.9845,-134.667 0|0:34:17,8,8,0:17:670:8,8,0:282,292,0:-18.5879,-1.9476,-54.6795,0,-33.4016,-52.7474,-23.7054,-57.0877,-55.1557,-78.8482 0|0:51:31,2,15,3:31:1229:2,15,3:68,560,118:-36.3706,-40.7328,-141.308,0,-96.224,-96.6801,-35.9918,-132.203,-91.4889,-136.273 0|0:32:18,0,14,0:18:712:0,14,0:0,527,0:-37.2192,-42.6378,-101.25,0,-58.9922,-54.7778,-42.6378,-101.25,-58.9922,-101.25 0|0:31:12,0,19,0:12:479:0,19,0:0,722,0:-54.5062,-58.1185,-97.581,0,-39.8505,-34.1309,-58.1185,-97.581,-39.8505,-97.581 dDocent_Contig_13848 110 . C T 519.485 . AB=0.382979;ABP=8.60069;AC=5;AF=0.416667;AN=12;AO=22;CIGAR=1X;DP=183;DPB=183;DPRA=0.198473;EPP=50.7827;EPPR=350.446;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=781;QR=5505;RO=160;RPL=0;RPP=50.7827;RPPR=350.446;RPR=22;RUN=1;SAF=0;SAP=50.7827;SAR=22;SRF=0;SRP=350.446;SRR=160;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:9,10:9:306:10:354:-26.4805,0,-22.151 0/1:19:15,4:15:522:4:146:-7.77822,0,-41.5897 1/1:5:0,4:0:0:4:144:-12.9536,-1.20412,0 0/1:9:5,4:5:171:4:137:-9.95804,0,-13.0172 0/0:68:68,0:68:2341:0:0:0,-20.47,-210.948 0/0:63:63,0:63:2165:0:0:0,-18.9649,-195.115 dDocent_Contig_13849 13 . T C 1495.65 . AB=0.226974;ABP=199.843;AC=6;AF=0.5;AN=12;AO=69;CIGAR=1X;DP=304;DPB=304;DPRA=0;EPP=152.842;EPPR=513.306;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.695652;PAIREDR=0.595745;PAO=0;PQA=0;PQR=0;PRO=0;QA=2780;QR=9521;RO=235;RPL=0;RPP=152.842;RPPR=513.306;RPR=69;RUN=1;SAF=69;SAP=152.842;SAR=0;SRF=235;SRP=513.306;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:58:41,17:41:1648:17:688:-44.789,0,-131.084 0/1:50:43,7:43:1739:7:271:-9.69572,0,-141.668 0/1:56:38,18:38:1539:18:728:-48.9835,0,-121.887 0/1:47:42,5:42:1709:5:204:-4.59562,0,-139.874 0/1:37:29,8:29:1177:8:321:-18.1182,0,-95.0658 0/1:56:42,14:42:1709:14:568:-34.6043,0,-137.165 dDocent_Contig_13850 8 . A T 5223.27 . AB=0.536657;ABP=6.99027;AC=6;AF=0.5;AN=12;AO=183;CIGAR=1X;DP=341;DPB=341;DPRA=0;EPP=400.39;EPPR=346.103;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.36612;PAIREDR=0.658228;PAO=0;PQA=0;PQR=0;PRO=0;QA=7049;QR=6065;RO=158;RPL=0;RPP=400.39;RPPR=346.103;RPR=183;RUN=1;SAF=183;SAP=400.39;SAR=0;SRF=158;SRP=346.103;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:63:34,29:34:1312:29:1120:-82.1377,0,-99.4029 0/1:78:31,47:31:1178:47:1796:-138.411,0,-82.8391 0/1:54:28,26:28:1075:26:1005:-74.5051,0,-80.7996 0/1:66:27,39:27:1044:39:1499:-115.317,0,-74.3996 0/1:28:17,11:17:656:11:428:-30.4465,0,-50.9474 0/1:52:21,31:21:800:31:1201:-92.7316,0,-56.6698 dDocent_Contig_13851 36 . G A 3829.76 . AB=0.488;ABP=3.32299;AC=7;AF=0.583334;AN=12;AO=122;CIGAR=1X1M;DP=250;DPB=250;DPRA=0;EPP=267.93;EPPR=194.1;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.631148;PAIREDR=0.579545;PAO=0;PQA=0;PQR=0;PRO=0;QA=4807;QR=3429;RO=88;RPL=0;RPP=267.93;RPPR=194.1;RPR=122;RUN=1;SAF=122;SAP=267.93;SAR=0;SRF=88;SRP=194.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:42:23,12,7:23:906:12,7:481,285:-32.7009,0,-70.9088,-16.1117,-51.0076,-88.5312 0|1:62:14,4,44:14:534:4,44:163,1685:-134.015,-124.78,-167.371,0,-30.3221,-30.5298 1|1:35:7,10,18:7:283:10,18:395,725:-66.8124,-36.4195,-56.7422,-9.16112,0,-27.0789 0|1:35:14,4,17:14:549:4,17:159,674:-51.2605,-42.384,-86.3251,0,-32.0511,-40.0255 0|1:31:17,3,11:17:670:3,11:121,447:-31.7537,-26.8976,-81.1047,0,-45.1342,-51.7984 0|1:45:13,7,25:13:487:7,25:276,991:-77.6552,-58.8605,-96.6221,0,-17.148,-32.3377 dDocent_Contig_13852 23 . A C 4838.61 . AB=0.839506;ABP=84.1054;AC=3;AF=0.25;AN=12;AO=150;CIGAR=1X;DP=320;DPB=320;DPRA=1.66667;EPP=328.731;EPPR=372.161;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5941;QR=6759;RO=170;RPL=0;RPP=328.731;RPPR=372.161;RPR=150;RUN=1;SAF=150;SAP=328.731;SAR=0;SRF=170;SRP=372.161;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:59:59,0:59:2348:0:0:0,-17.7608,-211.478 0/0:34:32,2:32:1288:2:81:0,-2.54929,-108.499 0/0:27:27,0:27:1043:0:0:0,-8.12781,-94.1464 0/0:34:34,0:34:1368:0:0:0,-10.235,-123.377 0/1:81:13,68:13:515:68:2649:-214.145,0,-22.3088 1/1:85:5,80:5:197:80:3211:-270.939,-7.48203,0 dDocent_Contig_13853 53 . G A 164.116 . AB=0.222222;ABP=9.04217;AC=3;AF=0.3;AN=10;AO=8;CIGAR=1X;DP=89;DPB=89;DPRA=0.445312;EPP=20.3821;EPPR=178.9;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=298;QR=3221;RO=81;RPL=8;RPP=20.3821;RPPR=178.9;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=81;SRP=178.9;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:13,1:13:512:1:38:0,-0.417151,-42.6287 0/0:30:29,1:29:1149:1:41:0,-4.93633,-99.5921 0/0:32:32,0:32:1285:0:0:0,-9.63296,-115.916 0/1:9:7,2:7:275:2:70:-3.93813,0,-22.4066 ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:149:-13.7731,-1.20412,0 dDocent_Contig_13854 81 . C G 51.5445 . AB=0.47619;ABP=3.1137;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=49;DPB=49;DPRA=1.5;EPP=24.725;EPPR=87.6977;GTI=0;LEN=1;MEANALT=1;MQM=13;MQMR=13;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=358;QR=1402;RO=39;RPL=10;RPP=24.725;RPPR=87.6977;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=39;SRP=87.6977;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:6:6,0:6:215:0:0:0,-1.80618,-7.13817 0/1:10:3,7:3:106:7:250:-5.29553,0,-0.622803 0/0:6:6,0:6:220:0:0:0,-1.80618,-7.14021 0/0:4:4,0:4:148:0:0:0,-1.20412,-4.80393 0/1:11:8,3:8:287:3:108:-0.322895,0,-6.16252 0/0:12:12,0:12:426:0:0:0,-3.61236,-14.1426 dDocent_Contig_13855 147 . C A 96.9994 . AB=0.227273;ABP=17.2236;AC=1;AF=0.1;AN=10;AO=6;CIGAR=1X;DP=91;DPB=91;DPRA=1.23;EPP=16.0391;EPPR=187.585;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.988235;PAO=0;PQA=0;PQR=0;PRO=0;QA=233;QR=3046;RO=85;RPL=0;RPP=16.0391;RPPR=187.585;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=187.585;SRR=85;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:418:0:0:0,-3.61236,-37.9504 0/1:22:17,5:17:621:5:195:-11.3015,0,-49.6015 0/0:37:37,0:37:1331:0:0:0,-11.1381,-120.086 0/0:19:18,1:18:639:1:38:0,-1.9223,-54.0383 0/0:1:1,0:1:37:0:0:0,-0.30103,-3.69783 ./.:.:.:.:.:.:.:. dDocent_Contig_13856 38 . A T 86.896 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1X;DP=315;DPB=315;DPRA=1.81618;EPP=16.0391;EPPR=671.824;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=198;QR=11781;RO=308;RPL=0;RPP=16.0391;RPPR=671.824;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=308;SRP=671.824;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:68:67,1:67:2500:1:35:0,-16.9714,-221.665 0/0:73:71,1:71:2645:1:38:0,-18.2665,-234.393 0/0:67:67,0:67:2649:0:0:0,-20.169,-238.552 0/0:103:102,1:102:3954:1:37:0,-27.3083,-352.216 1/1:3:0,3:0:0:3:88:-8.21199,-0.90309,0 0/0:1:1,0:1:33:0:0:0,-0.30103,-3.29913 dDocent_Contig_13857 185 . T C 95.453 . AB=0.134328;ABP=80.8268;AC=3;AF=0.3;AN=10;AO=10;CIGAR=1X;DP=97;DPB=97;DPRA=3.79167;EPP=24.725;EPPR=191.928;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.908046;PAO=0;PQA=0;PQR=0;PRO=0;QA=401;QR=3333;RO=87;RPL=10;RPP=24.725;RPPR=191.928;RPR=0;RUN=1;SAF=0;SAP=24.725;SAR=10;SRF=0;SRP=191.928;SRR=87;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:24:22,2:22:847:2:82:-0.554958,0,-69.3039 0/1:11:8,3:8:308:3:121:-7.96887,0,-24.767 0/0:24:23,1:23:910:1:41:0,-3.13015,-78.112 0/1:32:28,4:28:1046:4:157:-4.87422,0,-84.7804 ./.:.:.:.:.:.:.:. 0/0:6:6,0:6:222:0:0:0,-1.80618,-20.3285 dDocent_Contig_13858 146 . T A 7582.57 . AB=0.258065;ABP=50.2924;AC=6;AF=0.5;AN=12;AO=235;CIGAR=1X;DP=413;DPB=413;DPRA=3.73333;EPP=513.306;EPPR=389.532;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8978;QR=6708;RO=178;RPL=0;RPP=513.306;RPPR=389.532;RPR=235;RUN=1;SAF=0;SAP=513.306;SAR=235;SRF=0;SRP=389.532;SRR=178;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:17,18:17:653:18:686:-51.5289,0,-48.5682 0/1:58:52,6:52:1918:6:237:-4.24393,0,-155.397 0/0:21:21,0:21:811:0:0:0,-6.32163,-73.314 0/0:86:84,2:84:3175:2:60:0,-20.1927,-280.206 1/1:101:0,101:0:0:101:3826:-344.412,-30.404,0 1/1:112:4,108:4:151:108:4169:-361.293,-19.7574,0 dDocent_Contig_13859 209 . N G 438.729 . AB=0;ABP=0;AC=8;AF=1;AN=8;AO=12;CIGAR=1X;DP=12;DPB=12;DPRA=0;EPP=29.068;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=464;QR=0;RO=0;RPL=12;RPP=29.068;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=29.068;SAR=12;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:78:-7.40347,-0.60206,0 1/1:3:0,3:0:0:3:113:-10.539,-0.90309,0 1/1:2:0,2:0:0:2:78:-7.40347,-0.60206,0 1/1:5:0,5:0:0:5:195:-17.9242,-1.50515,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13860 91 . G A 2070.52 . AB=0.425325;ABP=17.9286;AC=4;AF=0.5;AN=8;AO=131;CIGAR=1X;DP=308;DPB=308;DPRA=0;EPP=287.473;EPPR=387.361;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3402;QR=4943;RO=177;RPL=131;RPP=287.473;RPPR=387.361;RPR=0;RUN=1;SAF=131;SAP=287.473;SAR=0;SRF=177;SRP=387.361;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:86:68,18:68:1884:18:415:-11.6883,0,-143.927 0/1:122:37,85:37:1017:85:2245:-165.563,0,-55.0672 0/1:76:60,16:60:1704:16:424:-15.5412,0,-130.743 0/1:24:12,12:12:338:12:318:-21.6575,0,-23.4724 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13862 12 . C A 34.8109 . AB=0.119048;ABP=55.9529;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=286;DPB=286;DPRA=0.860656;EPP=13.8677;EPPR=613.194;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.928826;PAO=0;PQA=0;PQR=0;PRO=0;QA=192;QR=11232;RO=281;RPL=0;RPP=13.8677;RPPR=613.194;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=281;SRP=613.194;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:95:95,0:95:3797:0:0:0,-28.5978,-341.738 0/0:106:106,0:106:4235:0:0:0,-31.9092,-381.102 0/0:39:39,0:39:1571:0:0:0,-11.7402,-141.623 0/1:42:37,5:37:1466:5:192:-5.00336,0,-119.546 0/0:1:1,0:1:40:0:0:0,-0.30103,-3.99568 0/0:3:3,0:3:123:0:0:0,-0.90309,-11.4648 dDocent_Contig_13863 60 . C A 229.128 . AB=0.277778;ABP=18.4519;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=2X;DP=344;DPB=344;DPRA=0.584416;EPP=24.725;EPPR=708.739;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.935385;PAO=0;PQA=0;PQR=0;PRO=0;QA=388;QR=12938;RO=325;RPL=10;RPP=24.725;RPPR=708.739;RPR=0;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=325;SRP=708.739;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:37:37,0:37:1470:0:0:0,-11.1381,-132.555 0|0:93:91,0:91:3619:0:0:0,-27.3937,-325.355 0|0:28:27,0:27:1077:0:0:0,-8.12781,-96.8208 0|0:127:122,0:122:4861:0:0:0,-36.7257,-437.005 0|1:36:26,10:26:1035:10:388:-24.4357,0,-82.6091 0|0:23:22,0:22:876:0:0:0,-6.62266,-78.7519 dDocent_Contig_13864 10 . T A 516.197 . AB=0.12963;ABP=389.05;AC=2;AF=0.166667;AN=12;AO=42;CIGAR=1X;DP=1500;DPB=1500;DPRA=0.55102;EPP=94.2121;EPPR=3164.67;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=59.9588;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.998626;PAO=0;PQA=0;PQR=0;PRO=0;QA=1684;QR=58031;RO=1456;RPL=0;RPP=94.2121;RPPR=3164.67;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=1456;SRP=3164.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:186:186,0:186:7443:0:0:0,-55.9916,-669.471 0/1:160:132,27:132:5234:27:1087:-50.1411,0,-421.975 0/1:164:149,15:149:5970:15:597:-4.70031,0,-487.7 0/0:327:327,0:327:13015:0:0:0,-98.4368,-1170.42 0/0:217:217,0:217:8627:0:0:0,-65.3235,-775.931 0/0:446:445,0:445:17742:0:0:0,-133.958,-1594.92 dDocent_Contig_13866 15 . A C 526.167 . AB=0.316667;ABP=20.5268;AC=7;AF=0.583334;AN=12;AO=19;CIGAR=1M1X2M;DP=71;DPB=70.5;DPRA=0;EPP=44.2683;EPPR=94.2121;GTI=0;LEN=1;MEANALT=1.6;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.526316;PAIREDR=0.952381;PAO=0;PQA=0;PQR=0;PRO=0;QA=758;QR=1669;RO=42;RPL=0;RPP=44.2683;RPPR=94.2121;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=42;SRP=94.2121;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:12:7,0,0,5:7:279:0,0,5:0,0,202:-14.9497,-17.0569,-40.0296,-17.0569,-40.0296,-40.0296,0,-23.3739,-23.3739,-21.8688 0|1:22:9,6,0,7:9:361:6,0,7:240,0,275:-19.9047,-2.84038,-30.7823,-22.6139,-32.5884,-52.3594,0,-9.97426,-29.7441,-27.6369 1|1:2:0,1,0,1:0:0:1,0,1:41,0,41:-7.17762,-3.79354,-3.49251,-7.17762,-3.79354,-7.17762,-3.79354,0,-3.79354,-3.49251 0|1:21:17,0,0,4:17:673:0,0,4:0,0,163:-8.7368,-13.8543,-69.2332,-13.8543,-69.2332,-69.2332,0,-55.7837,-55.7837,-54.5796 0|0:11:9,0,2,0:9:356:0,2,0:0,66,0:-2.95338,-5.66265,-35.0143,0,-29.6932,-29.0912,-5.66265,-35.0143,-29.6932,-35.0143 1|1:3:0,1,0,2:0:0:1,0,2:41,0,77:-10.0991,-6.70677,-6.40574,-10.0991,-6.70677,-10.0991,-3.79354,0,-3.79354,-3.19148 dDocent_Contig_13867 15 . A G 676.583 . AB=0.204819;ABP=128.642;AC=4;AF=0.333333;AN=12;AO=34;CIGAR=1X;DP=238;DPB=238;DPRA=1.15278;EPP=76.8404;EPPR=445.991;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.794118;PAIREDR=0.735294;PAO=0;PQA=0;PQR=0;PRO=0;QA=1371;QR=8128;RO=204;RPL=0;RPP=76.8404;RPPR=445.991;RPR=34;RUN=1;SAF=34;SAP=76.8404;SAR=0;SRF=204;SRP=445.991;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:20,5:20:804:5:197:-10.579,0,-65.1482 0/1:45:40,5:40:1587:5:204:-5.19768,0,-129.517 0/1:50:39,11:39:1579:11:447:-25.5344,0,-127.29 0/1:46:33,13:33:1303:13:523:-33.569,0,-103.686 0/0:32:32,0:32:1258:0:0:0,-9.63296,-113.489 0/0:40:40,0:40:1597:0:0:0,-12.0412,-143.966 dDocent_Contig_13868 13 . T C 295.393 . AB=0.165217;ABP=114.964;AC=4;AF=0.333333;AN=12;AO=20;CIGAR=1X;DP=159;DPB=159;DPRA=1.072;EPP=46.4397;EPPR=302.673;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.789855;PAO=0;PQA=0;PQR=0;PRO=0;QA=809;QR=5577;RO=138;RPL=0;RPP=46.4397;RPPR=302.673;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=138;SRP=302.673;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:19,2:19:773:2:79:-1.17561,0,-63.5661 0/1:39:34,4:34:1367:4:160:-2.93681,0,-111.436 0/0:19:18,1:18:733:1:41:0,-1.625,-62.1991 0/0:25:25,0:25:1014:0:0:0,-7.52575,-91.5522 0/1:29:20,9:20:802:9:367:-24.6654,0,-63.7664 0/1:26:22,4:22:888:4:162:-7.14018,0,-72.3981 dDocent_Contig_13869 9 . C T 145.511 . AB=0.14;ABP=115.579;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=228;DPB=228;DPRA=1.5625;EPP=33.4109;EPPR=467.705;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.962617;PAO=0;PQA=0;PQR=0;PRO=0;QA=524;QR=8195;RO=214;RPL=0;RPP=33.4109;RPPR=467.705;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=214;SRP=467.705;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:34,0:34:1307:0:0:0,-10.235,-117.918 0/0:33:33,0:33:1258:0:0:0,-9.93399,-113.508 0/0:31:31,0:31:1192:0:0:0,-9.33193,-107.575 0/0:30:30,0:30:1143:0:0:0,-9.0309,-103.168 0/1:66:57,9:57:2182:9:331:-10.2666,0,-176.738 0/1:34:29,5:29:1113:5:193:-7.50634,0,-90.2352 dDocent_Contig_13870 52 . C T 84.949 . AB=0.285714;ABP=8.59409;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=94;DPB=94;DPRA=0.875;EPP=11.6962;EPPR=198.443;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=8.67362e-19;PAIRED=1;PAIREDR=0.9;PAO=0;PQA=0;PQR=0;PRO=0;QA=154;QR=3536;RO=90;RPL=4;RPP=11.6962;RPPR=198.443;RPR=0;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=90;SRP=198.443;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:954:0:0:0,-7.22472,-86.1606 0/0:6:6,0:6:245:0:0:0,-1.80618,-22.4295 0/0:15:15,0:15:558:0:0:0,-4.51545,-50.5454 0/0:26:26,0:26:1016:0:0:0,-7.82678,-91.7378 0/1:14:10,4:10:396:4:154:-10.0178,0,-31.7833 0/0:9:9,0:9:367:0:0:0,-2.70927,-33.3953 dDocent_Contig_13872 7 . A G 491.441 . AB=0.234043;ABP=89.6382;AC=5;AF=0.416667;AN=12;AO=35;CIGAR=1X;DP=170;DPB=170;DPRA=0;EPP=79.0118;EPPR=293.988;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.571429;PAIREDR=0.552239;PAO=0;PQA=0;PQR=0;PRO=0;QA=1152;QR=5119;RO=134;RPL=0;RPP=79.0118;RPPR=293.988;RPR=35;RUN=1;SAF=35;SAP=79.0118;SAR=0;SRF=134;SRP=293.988;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:20,10:20:769:10:327:-20.7078,0,-60.5062 0/0:29:27,2:27:1015:2:51:0,-3.88619,-86.8129 0/1:22:19,3:19:734:3:110:-3.63695,0,-59.7688 0/1:44:36,8:36:1379:8:273:-11.653,0,-111.147 0/1:28:22,5:22:840:5:170:-7.28845,0,-67.5944 0/1:17:10,7:10:382:7:221:-15.078,0,-29.6175 dDocent_Contig_13873 130 . G A 328.924 . AB=0.361702;ABP=10.8184;AC=4;AF=0.333333;AN=12;AO=17;CIGAR=1X;DP=138;DPB=138;DPRA=0.258242;EPP=39.9253;EPPR=265.758;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=588;QR=4549;RO=121;RPL=0;RPP=39.9253;RPPR=265.758;RPR=17;RUN=1;SAF=0;SAP=39.9253;SAR=17;SRF=0;SRP=265.758;SRR=121;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:5:3,2:3:117:2:62:-4.38356,0,-9.40523 0/1:9:5,4:5:193:4:143:-10.5096,0,-15.0321 0/1:24:17,7:17:626:7:235:-14.2484,0,-49.4411 0/1:9:5,4:5:189:4:148:-10.9724,0,-14.6661 0/0:61:61,0:61:2277:0:0:0,-18.3628,-205.143 0/0:30:30,0:30:1147:0:0:0,-9.0309,-103.529 dDocent_Contig_13874 10 . T A 827.498 . AB=0.148241;ABP=430.758;AC=4;AF=0.333333;AN=12;AO=59;CIGAR=1X;DP=689;DPB=689;DPRA=0.683849;EPP=131.127;EPPR=1368.87;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.216216;PAO=0;PQA=0;PQR=0;PRO=0;QA=2317;QR=24982;RO=629;RPL=0;RPP=131.127;RPPR=1368.87;RPR=59;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=629;SRP=1368.87;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:85:74,11:74:2918:11:443:-14.6387,0,-237.14 0/1:143:115,28:115:4559:28:1069:-53.4443,0,-367.202 0/1:83:70,12:70:2756:12:481:-18.5456,0,-223.058 0/1:87:79,8:79:3160:8:324:-3.33979,0,-258.279 0/0:160:160,0:160:6344:0:0:0,-48.1648,-570.72 0/0:131:131,0:131:5245:0:0:0,-39.4349,-471.903 dDocent_Contig_13875 18 . T G 36.2038 . AB=0.136364;ABP=28.2783;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=186;DPB=186;DPRA=0.670732;EPP=9.52472;EPPR=400.39;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.68306;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=7279;RO=183;RPL=0;RPP=9.52472;RPPR=400.39;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=183;SRP=400.39;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:19,3:19:759:3:123:-4.84213,0,-62.0056 0/0:45:45,0:45:1796:0:0:0,-13.5463,-161.852 0/0:24:24,0:24:973:0:0:0,-7.22472,-87.8674 0/0:34:34,0:34:1321:0:0:0,-10.235,-119.142 0/0:30:30,0:30:1204:0:0:0,-9.0309,-108.632 0/0:31:31,0:31:1226:0:0:0,-9.33193,-110.609 dDocent_Contig_13876 59 . T G 153.366 . AB=0.195122;ABP=36.112;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=129;DPB=129;DPRA=0.931818;EPP=20.3821;EPPR=265.758;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.85124;PAO=0;PQA=0;PQR=0;PRO=0;QA=319;QR=4798;RO=121;RPL=4;RPP=3.0103;RPPR=9.48883;RPR=4;RUN=1;SAF=4;SAP=3.0103;SAR=4;SRF=51;SRP=9.48883;SRR=70;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:11:11,0:11:444:0:0:0,-3.31133,-40.3156 0/0:35:35,0:35:1380:0:0:0,-10.536,-124.46 0/1:17:11,6:11:447:6:240:-16.8581,0,-35.468 0/1:24:22,2:22:872:2:79:-0.272912,0,-71.5638 0/0:15:15,0:15:589:0:0:0,-4.51545,-53.3407 0/0:27:27,0:27:1066:0:0:0,-8.12781,-96.226 dDocent_Contig_13877 119 . A T 1106.68 . AB=0.483516;ABP=3.22506;AC=3;AF=0.3;AN=10;AO=44;CIGAR=1X;DP=131;DPB=131;DPRA=1.51667;EPP=98.5551;EPPR=191.928;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1582;QR=3179;RO=87;RPL=0;RPP=98.5551;RPPR=191.928;RPR=44;RUN=1;SAF=0;SAP=98.5551;SAR=44;SRF=0;SRP=191.928;SRR=87;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:39:28,11:28:1024:11:381:-22.8795,0,-80.7337 0/0:33:33,0:33:1218:0:0:0,-9.93399,-109.926 0/1:47:17,30:17:609:30:1097:-84.8928,0,-40.991 0/1:5:2,3:2:74:3:104:-8.19706,0,-5.52073 ./.:.:.:.:.:.:.:. 0/0:7:7,0:7:254:0:0:0,-2.10721,-23.2106 dDocent_Contig_13878 21 . A G 471.961 . AB=0.176101;ABP=147.898;AC=5;AF=0.416667;AN=12;AO=28;CIGAR=1X;DP=191;DPB=191;DPRA=0.99375;EPP=63.8115;EPPR=356.96;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.96319;PAO=0;PQA=0;PQR=0;PRO=0;QA=1137;QR=6528;RO=163;RPL=0;RPP=63.8115;RPPR=356.96;RPR=28;RUN=1;SAF=28;SAP=63.8115;SAR=0;SRF=163;SRP=356.96;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:28:20,8:20:805:8:327:-21.3713,0,-64.3359 0/1:36:29,7:29:1160:7:284:-15.0967,0,-93.8427 0/1:18:16,2:16:648:2:82:-2.36114,0,-53.2352 0/1:53:48,5:48:1936:5:201:-2.51542,0,-158.48 0/1:24:18,6:18:695:6:243:-15.0229,0,-55.6473 0/0:32:32,0:32:1284:0:0:0,-9.63296,-115.826 dDocent_Contig_13879 173 . T G 65.7993 . AB=0.272727;ABP=7.94546;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=2X1M2X;DP=65;DPB=65;DPRA=2.1;EPP=11.6962;EPPR=118.098;GTI=0;LEN=1;MEANALT=1;MQM=18.5;MQMR=60;NS=6;NUMALT=2;ODDS=3.46945e-18;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=142;QR=1935;RO=53;RPL=4;RPP=11.6962;RPPR=118.098;RPR=0;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=118.098;SRR=53;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:11:8,3,0:8:304:3,0:104,0:-1.68986,0,-24.408,-4.0981,-25.3111,-29.1758 0|0:10:9,1,0:9:315:1,0:38,0:0,-1.01706,-26.6886,-2.70927,-26.9896,-28.4674 0|0:5:3,0,0:3:118:0,0:0,0:0,-0.90309,-10.7259,-0.90309,-10.7259,-10.7259 0|0:10:9,0,1:9:351:0,1:0,35:-0.488329,-3.1976,-32.0848,0,-29.241,-28.94 0|0:11:9,0,2:9:308:0,2:0,76:-3.90293,-6.6122,-31.5731,0,-25.3338,-24.7317 0|0:18:15,0,3:15:539:0,3:0,121:-5.86166,-10.3771,-54.3013,0,-44.3198,-43.4167 dDocent_Contig_13880 17 . G A 514.485 . AB=0.20155;ABP=102.814;AC=3;AF=0.25;AN=12;AO=26;CIGAR=1X;DP=196;DPB=196;DPRA=1.92537;EPP=59.4686;EPPR=372.161;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0384615;PAIREDR=0.5;PAO=0;PQA=0;PQR=0;PRO=0;QA=1049;QR=6851;RO=170;RPL=0;RPP=59.4686;RPPR=372.161;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=170;SRP=372.161;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:33,5:33:1327:5:197:-6.66614,0,-108.253 0/1:59:42,17:42:1703:17:689:-44.5787,0,-135.727 0/1:32:28,4:28:1120:4:163:-5.42547,0,-91.4505 0/0:25:25,0:25:1011:0:0:0,-7.52575,-91.2844 0/0:24:24,0:24:962:0:0:0,-7.22472,-86.8773 0/0:18:18,0:18:728:0:0:0,-5.41854,-65.8446 dDocent_Contig_13881 24 . A T 328.795 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=10;CIGAR=1X;DP=68;DPB=68;DPRA=1.09091;EPP=24.725;EPPR=128.956;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=397;QR=2313;RO=58;RPL=0;RPP=24.725;RPPR=128.956;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=58;SRP=128.956;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:6:6,0:6:238:0:0:0,-1.80618,-21.7945 0/0:14:14,0:14:551:0:0:0,-4.21442,-49.9322 0/0:18:18,0:18:727:0:0:0,-5.41854,-65.7553 0/0:15:14,1:14:558:1:41:0,-0.420883,-46.4687 0/0:6:6,0:6:239:0:0:0,-1.80618,-21.8848 1/1:9:0,9:0:0:9:356:-32.4021,-2.70927,0 dDocent_Contig_13882 9 . C T 43.8555 . AB=0.1875;ABP=16.582;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=120;DPB=120;DPRA=0.769231;EPP=9.52472;EPPR=257.073;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.991453;PAO=0;PQA=0;PQR=0;PRO=0;QA=115;QR=4525;RO=117;RPL=0;RPP=9.52472;RPPR=257.073;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=117;SRP=257.073;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:12:12,0:12:467:0:0:0,-3.61236,-42.3824 0/0:12:12,0:12:464:0:0:0,-3.61236,-42.1111 0/0:36:36,0:36:1393:0:0:0,-10.8371,-125.652 0/0:28:28,0:28:1083:0:0:0,-8.42884,-97.7749 0/1:16:13,3:13:498:3:115:-5.90841,0,-40.3488 0/0:16:16,0:16:620:0:0:0,-4.81648,-56.1401 dDocent_Contig_13883 122 . G C 204.567 . AB=0.245283;ABP=32.8783;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=156;DPB=156;DPRA=3.7;EPP=39.9253;EPPR=304.845;GTI=0;LEN=1;MEANALT=1;MQM=59.7647;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.741007;PAO=0;PQA=0;PQR=0;PRO=0;QA=572;QR=4755;RO=139;RPL=0;RPP=39.9253;RPPR=304.845;RPR=17;RUN=1;SAF=0;SAP=39.9253;SAR=17;SRF=0;SRP=304.845;SRR=139;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:29,1:29:1003:1:35:0,-5.53433,-87.0858 0/0:28:27,1:27:907:1:35:0,-4.93021,-78.4375 0/0:37:35,2:35:1182:2:69:0,-4.58545,-100.128 0/1:47:38,9:38:1324:9:293:-12.5386,0,-105.315 0/1:6:2,4:2:59:4:140:-11.1387,0,-3.79741 0/0:8:8,0:8:280:0:0:0,-2.40824,-25.54 dDocent_Contig_13884 19 . C T 1271.04 . AB=0.286486;ABP=76.2652;AC=6;AF=0.5;AN=12;AO=53;CIGAR=1X;DP=185;DPB=185;DPRA=0;EPP=118.098;EPPR=289.645;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.792453;PAIREDR=0.833333;PAO=0;PQA=0;PQR=0;PRO=0;QA=2113;QR=5285;RO=132;RPL=0;RPP=118.098;RPPR=289.645;RPR=53;RUN=1;SAF=53;SAP=118.098;SAR=0;SRF=132;SRP=289.645;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:10:8,2:8:310:2:81:-4.67543,0,-25.2464 0/1:37:34,3:34:1363:3:123:-0.326678,0,-111.79 0/1:13:9,4:9:367:4:151:-10.0419,0,-29.4819 0/1:52:32,20:32:1284:20:801:-56.7534,0,-100.173 0/1:30:18,12:18:728:12:486:-35.0605,0,-56.8137 0/1:43:31,12:31:1233:12:471:-29.793,0,-98.3025 dDocent_Contig_13885 119 . C A 223.333 . AB=0;ABP=0;AC=2;AF=0.2;AN=10;AO=13;CIGAR=1X;DP=158;DPB=158;DPRA=0;EPP=31.2394;EPPR=317.874;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=445;QR=4723;RO=145;RPL=0;RPP=31.2394;RPPR=317.874;RPR=13;RUN=1;SAF=0;SAP=31.2394;SAR=13;SRF=0;SRP=317.874;SRR=145;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:55:53,2:53:1772:2:69:0,-10.004,-153.21 0/0:30:28,2:28:930:2:70:0,-2.3835,-77.3595 0/0:14:13,1:13:432:1:32:0,-1.01511,-36.0017 0/0:52:51,1:51:1589:1:34:0,-12.2546,-139.883 ./.:.:.:.:.:.:.:. 1/1:7:0,7:0:0:7:240:-21.9352,-2.10721,0 dDocent_Contig_13886 13 . T G 461.759 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=242;DPB=242;DPRA=1.37255;EPP=39.9253;EPPR=491.592;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=634;QR=8528;RO=225;RPL=0;RPP=39.9253;RPPR=491.592;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=225;SRP=491.592;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:48,0:48:1820:0:0:0,-14.4494,-164.049 0/0:77:76,1:76:2900:1:8:0,-22.3793,-260.373 0/0:52:52,0:52:1965:0:0:0,-15.6536,-177.084 0/0:50:47,3:47:1768:3:122:0,-3.67901,-148.008 1/1:13:0,13:0:0:13:504:-45.6985,-3.91339,0 0/0:2:2,0:2:75:0:0:0,-0.60206,-7.1201 dDocent_Contig_13888 21 . G A 225.405 . AB=0.290323;ABP=14.8483;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=213;DPB=213;DPRA=0.821192;EPP=26.8965;EPPR=441.648;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.79703;PAO=0;PQA=0;PQR=0;PRO=0;QA=449;QR=8065;RO=202;RPL=0;RPP=26.8965;RPPR=441.648;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=202;SRP=441.648;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:32,0:32:1269:0:0:0,-9.63296,-114.474 0/0:48:48,0:48:1941:0:0:0,-14.4494,-174.884 0/0:32:32,0:32:1284:0:0:0,-9.63296,-115.822 0/0:39:39,0:39:1566:0:0:0,-11.7402,-141.178 0/1:31:22,9:22:862:9:367:-24.0633,0,-68.5508 0/0:31:29,2:29:1143:2:82:0,-1.55225,-95.371 dDocent_Contig_13889 49 . G A 1345.06 . AB=0.884615;ABP=36.4176;AC=3;AF=0.25;AN=12;AO=41;CIGAR=1X;DP=113;DPB=113;DPRA=1.27536;EPP=92.0407;EPPR=159.356;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1588;QR=2688;RO=72;RPL=0;RPP=92.0407;RPPR=159.356;RPR=41;RUN=1;SAF=41;SAP=92.0407;SAR=0;SRF=72;SRP=159.356;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:9:9,0:9:304:0:0:0,-2.70927,-27.6774 0/0:35:35,0:35:1316:0:0:0,-10.536,-118.716 0/0:15:15,0:15:571:0:0:0,-4.51545,-51.7292 0/0:10:10,0:10:379:0:0:0,-3.0103,-34.4587 1/1:18:0,18:0:0:18:700:-63.3215,-5.41854,0 0/1:26:3,23:3:118:23:888:-72.4014,0,-3.17594 dDocent_Contig_13891 38 . C A 1252.91 . AB=0.328947;ABP=41.6397;AC=5;AF=0.5;AN=10;AO=50;CIGAR=2X;DP=152;DPB=152;DPRA=0;EPP=11.5225;EPPR=90.2098;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.902;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.529412;PAO=0;PQA=0;PQR=0;PRO=0;QA=1984;QR=4058;RO=102;RPL=0;RPP=111.584;RPPR=224.5;RPR=50;RUN=1;SAF=18;SAP=11.5225;SAR=32;SRF=83;SRP=90.2098;SRR=19;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:27:21,6:21:847:6:241:-13.9389,0,-68.4147 0|1:43:32,11:32:1273:11:446:-27.5513,0,-101.889 0|1:41:31,10:31:1250:10:400:-24.0161,0,-100.427 0|1:32:15,17:15:566:17:659:-50.0023,0,-41.627 .:.:.:.:.:.:.:. 0|1:9:3,6:3:122:6:238:-19.0838,0,-8.66322 dDocent_Contig_13893 17 . G A 39.5874 . AB=0.157895;ABP=22.325;AC=1;AF=0.1;AN=10;AO=3;CIGAR=1M1X11M1X1M;DP=85;DPB=82.4;DPRA=1.15152;EPP=9.52472;EPPR=172.385;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=2;ODDS=3.46945e-18;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=121;QR=3061;RO=78;RPL=0;RPP=9.52472;RPPR=172.385;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=78;SRP=172.385;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:4:4,0,0:4:158:0,0:0,0:0,-1.20412,-14.6005,-1.20412,-14.6005,-14.6005 .:.:.:.:.:.:.:. 0|0:12:11,0,0:11:436:0,0:0,0:0,-3.31133,-39.1876,-3.31133,-39.1876,-39.1876 0|1:19:16,3,0:16:627:3,0:121,0:-5.56063,0,-51.047,-10.3771,-51.9501,-61.9261 0|0:42:39,0,3:39:1528:0,3:0,111:0,-11.7402,-137.408,-2.28944,-128.328,-127.425 0|0:8:8,0,0:8:312:0,0:0,0:0,-2.40824,-28.4441,-2.40824,-28.4441,-28.4441 dDocent_Contig_13895 90 . A G 1957.38 . AB=0.637097;ABP=23.254;AC=2;AF=0.166667;AN=12;AO=83;CIGAR=1X;DP=396;DPB=396;DPRA=1.084;EPP=183.243;EPPR=682.681;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2742;QR=10593;RO=313;RPL=83;RPP=183.243;RPPR=682.681;RPR=0;RUN=1;SAF=83;SAP=183.243;SAR=0;SRF=313;SRP=682.681;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:48:19,29:19:647:29:932:-69.7244,0,-44.1008 0/0:67:67,0:67:2272:0:0:0,-20.169,-204.749 0/0:78:77,1:77:2588:1:18:0,-21.6804,-231.373 0/1:76:26,50:26:892:50:1687:-129.235,0,-57.7158 0/0:58:58,0:58:1956:0:0:0,-17.4597,-176.316 0/0:69:66,3:66:2238:3:105:0,-10.9749,-191.894 dDocent_Contig_13896 89 . T A 314.015 . AB=0.348837;ABP=11.5447;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=78;DPB=78;DPRA=6.8;EPP=37.7539;EPPR=137.642;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.967742;PAO=0;PQA=0;PQR=0;PRO=0;QA=556;QR=2107;RO=62;RPL=16;RPP=37.7539;RPPR=137.642;RPR=0;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=62;SRP=137.642;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:5:5,0:5:175:0:0:0,-1.50515,-16.0933 0/0:25:24,1:24:829:1:35:0,-4.02712,-71.4257 0/1:24:12,12:12:420:12:417:-30.6386,0,-30.909 0/1:19:16,3:16:507:3:104:-3.98352,0,-40.2086 0/0:4:4,0:4:142:0:0:0,-1.20412,-13.1292 0/0:1:1,0:1:34:0:0:0,-0.30103,-3.39891 dDocent_Contig_13897 19 . T A 977.517 . AB=0.344828;ABP=27.2709;AC=6;AF=0.5;AN=12;AO=40;CIGAR=1X;DP=116;DPB=116;DPRA=0;EPP=89.8692;EPPR=165.871;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.9;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1572;QR=2992;RO=75;RPL=0;RPP=89.8692;RPPR=165.871;RPR=40;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=75;SRP=165.871;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:15:9,6:9:363:6:242:-17.6415,0,-28.5188 0/1:29:26,3:26:1041:3:120:-2.45744,0,-85.2518 0/1:25:20,5:20:801:5:203:-11.1273,0,-64.8813 0/1:13:3,10:3:113:10:402:-32.6201,0,-6.62263 0/1:12:5,7:5:191:7:252:-19.4066,0,-13.9438 0/1:22:12,9:12:483:9:353:-25.696,0,-37.3954 dDocent_Contig_13900 43 . G A 1511.18 . AB=0.586207;ABP=8.62618;AC=4;AF=0.333333;AN=12;AO=51;CIGAR=1X;DP=103;DPB=103;DPRA=2.71875;EPP=113.755;EPPR=115.927;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.980769;PAO=0;PQA=0;PQR=0;PRO=0;QA=2035;QR=2062;RO=52;RPL=0;RPP=113.755;RPPR=115.927;RPR=51;RUN=1;SAF=51;SAP=113.755;SAR=0;SRF=52;SRP=115.927;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:18:7,11:7:269:11:432:-33.8067,0,-19.1515 0/1:24:13,11:13:517:11:443:-33.0001,0,-39.6502 0/1:16:4,12:4:161:12:484:-39.0931,0,-10.0584 0/1:29:12,17:12:478:17:676:-52.4396,0,-34.6406 0/0:13:13,0:13:523:0:0:0,-3.91339,-47.4171 0/0:3:3,0:3:114:0:0:0,-0.90309,-10.6292 dDocent_Contig_13901 9 . C G 2006.34 . AB=0.200368;ABP=427.23;AC=3;AF=0.25;AN=12;AO=118;CIGAR=1X;DP=957;DPB=957;DPRA=1.29531;EPP=259.244;EPPR=1796.74;GTI=0;LEN=1;MEANALT=1.2;MQM=59.5085;MQMR=59.8854;NS=6;NUMALT=1;ODDS=0;PAIRED=0.983051;PAIREDR=0.99642;PAO=0;PQA=0;PQR=0;PRO=0;QA=4452;QR=31682;RO=838;RPL=0;RPP=259.244;RPPR=1822.7;RPR=118;RUN=1;SAF=118;SAP=259.244;SAR=0;SRF=835;SRP=1796.74;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:151:146,5:146:5480:5:183:0,-28.6299,-476.375 0/1:239:192,47:192:7205:47:1762:-86.8945,0,-574.43 0/1:120:94,25:94:3566:25:961:-50.5925,0,-284.854 0/1:185:148,37:148:5654:37:1390:-68.3685,0,-453.147 0/0:128:128,0:128:4850:0:0:0,-38.5318,-436.544 0/0:134:130,4:130:4927:4:156:0,-25.9207,-429.047 dDocent_Contig_13904 9 . C T 409.017 . AB=0.287879;ABP=28.8048;AC=3;AF=0.3;AN=10;AO=19;CIGAR=1X;DP=80;DPB=80;DPRA=3.14286;EPP=44.2683;EPPR=135.47;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0.0526316;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=722;QR=2344;RO=61;RPL=0;RPP=44.2683;RPPR=135.47;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=61;SRP=135.47;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:17:10,7:10:390:7:273:-19.8205,0,-30.3412 0/0:10:10,0:10:388:0:0:0,-3.0103,-35.2779 0/1:27:23,4:23:876:4:154:-6.10565,0,-71.0282 0/1:22:14,8:14:535:8:295:-20.2765,0,-41.8719 ./.:.:.:.:.:.:.:. 0/0:4:4,0:4:155:0:0:0,-1.20412,-14.3254 dDocent_Contig_13905 88 . G T 964.155 . AB=0.465116;ABP=3.91929;AC=4;AF=0.5;AN=8;AO=40;CIGAR=1X;DP=86;DPB=86;DPRA=0;EPP=89.8692;EPPR=102.898;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1426;QR=1615;RO=46;RPL=40;RPP=89.8692;RPPR=102.898;RPR=0;RUN=1;SAF=40;SAP=89.8692;SAR=0;SRF=46;SRP=102.898;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:11,5:11:383:5:178:-11.5522,0,-29.9865 0/1:25:18,7:18:628:7:243:-14.6824,0,-49.3205 0/1:18:6,12:6:216:12:432:-33.8027,0,-14.372 0/1:27:11,16:11:388:16:573:-43.7762,0,-27.13 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13906 107 . N T 59.9928 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=39.6667;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=59;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:32:-3.13615,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:27:-2.55972,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13907 9 . C G 366.245 . AB=0.208333;ABP=73.9451;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=259;DPB=259;DPRA=1.17791;EPP=46.4397;EPPR=519.821;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=757;QR=9074;RO=238;RPL=0;RPP=46.4397;RPPR=519.821;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=238;SRP=519.821;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:11:11,0:11:383:0:0:0,-3.31133,-34.7956 0/0:37:37,0:37:1419:0:0:0,-11.1381,-127.989 0/0:79:79,0:79:3036:0:0:0,-23.7814,-273.399 0/0:36:36,0:36:1377:0:0:0,-10.8371,-124.212 0/1:46:35,11:35:1342:11:410:-23.3964,0,-107.219 0/1:50:40,9:40:1517:9:347:-16.4499,0,-121.664 dDocent_Contig_13908 12 . C A 308.302 . AB=0.125571;ABP=536.379;AC=4;AF=0.333333;AN=12;AO=63;CIGAR=1X;DP=595;DPB=595;DPRA=0;EPP=139.813;EPPR=1156.06;GTI=0;LEN=1;MEANALT=1.16667;MQM=36.3175;MQMR=59.4614;NS=6;NUMALT=1;ODDS=2.77556e-17;PAIRED=0;PAIREDR=0.0583804;PAO=0;PQA=0;PQR=0;PRO=0;QA=2495;QR=21246;RO=531;RPL=0;RPP=139.813;RPPR=1156.06;RPR=63;RUN=1;SAF=63;SAP=139.813;SAR=0;SRF=531;SRP=1156.06;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:97:83,14:83:3282:14:564:-13.0034,0,-266.242 0/1:125:112,12:112:4454:12:469:-0.784764,0,-362.926 0/1:100:85,15:85:3406:15:584:-17.0667,0,-276.403 0/1:116:102,14:102:4100:14:562:-5.9776,0,-332.493 0/0:86:83,3:83:3355:3:115:0,-16.4759,-291.205 0/0:71:66,5:66:2649:5:201:0,-6.98687,-224.103 dDocent_Contig_13910 23 . G A 1244.61 . AB=0.175;ABP=39.7082;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=2X11M;DP=336;DPB=323.923;DPRA=0;EPP=18.2106;EPPR=406.904;GTI=0;LEN=1;MEANALT=6;MQM=60;MQMR=60;NS=6;NUMALT=8;ODDS=5.55112e-17;PAIRED=1;PAIREDR=0.833333;PAO=0;PQA=0;PQR=0;PRO=0;QA=282;QR=7281;RO=186;RPL=0;RPP=18.2106;RPPR=406.904;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=186;SRP=406.904;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:44:23,4,0,5,0,0,1,6,3:23:909:4,0,5,0,0,1,6,3:157,0,179,0,0,40,240,104:-12.8553,-6.86385,-80.4761,-19.779,-81.6802,-94.5924,-5.19383,-67.093,-80.0048,-78.4997,-19.779,-81.6802,-94.5924,-80.0048,-94.5924,-19.779,-81.6802,-94.5924,-80.0048,-94.5924,-94.5924,-16.4828,-78.3848,-91.297,-76.7095,-91.297,-91.297,-90.996,0,-61.9077,-74.8203,-60.233,-74.8203,-74.8203,-71.5248,-73.0141,-11.3371,-73.2363,-86.1483,-71.5614,-86.1483,-86.1483,-82.853,-66.3765,-85.2452 0|0:81:52,0,7,0,0,0,1,13,7:52:2042:0,7,0,0,0,1,13,7:0,230,0,0,0,41,482,274:-23.778,-39.4315,-207.396,-20.8619,-188.819,-186.712,-39.4315,-207.396,-188.819,-207.396,-39.4315,-207.396,-188.819,-207.396,-207.396,-39.4315,-207.396,-188.819,-207.396,-207.396,-207.396,-36.046,-204.011,-185.434,-204.011,-204.011,-204.011,-203.71,0,-167.969,-149.393,-167.969,-167.969,-167.969,-164.584,-164.055,-16.8954,-184.866,-166.29,-184.866,-184.866,-184.866,-181.482,-145.439,-182.759 0|0:53:32,3,4,1,0,0,1,7,5:32:1245:3,4,1,0,0,1,7,5:104,151,40,0,0,34,282,196:-13.6193,-14.8087,-116.215,-10.881,-104.746,-111.989,-19.9564,-113.823,-109.898,-121.969,-23.2522,-117.118,-113.193,-122.27,-125.565,-23.2522,-117.118,-113.193,-122.27,-125.565,-125.565,-20.4965,-114.361,-110.436,-119.513,-122.808,-122.808,-122.507,0,-93.8729,-89.9479,-99.0246,-102.32,-102.32,-99.563,-100.213,-7.13373,-101.002,-97.0768,-106.153,-109.449,-109.449,-106.692,-86.203,-107.944 0|0:63:36,3,0,1,0,0,2,14,5:36:1407:3,0,1,0,0,2,14,5:120,0,32,0,0,76,568,201:-36.0331,-36.9826,-151.757,-46.8702,-152.66,-162.546,-44.2941,-150.083,-159.969,-159.668,-46.8702,-152.66,-162.546,-159.969,-162.546,-46.8702,-152.66,-162.546,-159.969,-162.546,-162.546,-40.6383,-146.429,-156.315,-153.737,-156.315,-156.315,-155.713,0,-105.812,-115.698,-113.121,-115.698,-115.698,-109.466,-111.484,-30.3013,-136.095,-145.981,-143.404,-145.981,-145.981,-139.749,-99.1319,-144.476 0|0:55:26,0,12,4,0,0,5,7,0:26:1027:0,12,4,0,0,5,7,0:0,475,143,0,0,192,283,0:-31.2712,-39.098,-123.611,0,-84.5166,-80.9042,-27.4486,-111.96,-72.8655,-110.755,-39.098,-123.611,-84.5166,-111.96,-123.611,-39.098,-123.611,-84.5166,-111.96,-123.611,-123.611,-23.3432,-107.856,-68.7615,-96.2048,-107.856,-107.856,-106.351,-15.7615,-100.278,-61.1821,-88.6261,-100.278,-100.278,-84.5224,-98.1704,-39.098,-123.611,-84.5166,-111.96,-123.611,-123.611,-107.856,-100.278,-123.611 0|1:40:17,0,5,1,5,7,1,4,0:17:651:0,5,1,5,7,1,4,0:0,201,41,200,282,41,162,0:-18.1258,-23.2433,-76.6534,-6.67974,-60.0885,-58.5834,-19.8589,-73.2689,-56.7039,-72.9679,-6.76929,-60.1778,-43.6126,-56.7932,-58.6726,0,-53.4083,-36.8428,-50.0237,-36.9321,-51.3011,-19.8589,-73.2689,-56.7039,-69.8844,-56.7932,-50.0237,-72.9679,-9.88455,-63.2939,-46.7287,-59.9094,-46.818,-40.0483,-59.9094,-62.0898,-23.2433,-76.6534,-60.0885,-73.2689,-60.1778,-53.4083,-73.2689,-63.2939,-76.6534 dDocent_Contig_13912 116 . G A 226.117 . AB=0.162162;ABP=39.6906;AC=5;AF=0.416667;AN=12;AO=13;CIGAR=1X;DP=77;DPB=77;DPRA=0.610526;EPP=31.2394;EPPR=141.985;GTI=0;LEN=1;MEANALT=1;MQM=59.3846;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0769231;PAIREDR=0.828125;PAO=0;PQA=0;PQR=0;PRO=0;QA=447;QR=2190;RO=64;RPL=0;RPP=31.2394;RPPR=141.985;RPR=13;RUN=1;SAF=0;SAP=31.2394;SAR=13;SRF=0;SRP=141.985;SRR=64;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:14,1:14:473:1:35:0,-1.01682,-39.3941 0/1:18:15,3:15:523:3:105:-4.37762,0,-41.982 0/1:6:5,1:5:159:1:33:-1.49295,0,-12.8176 0/0:19:19,0:19:651:0:0:0,-5.71957,-58.9112 0/1:13:11,2:11:384:2:70:-2.73401,0,-30.9822 1/1:6:0,6:0:0:6:204:-18.6871,-1.80618,0 dDocent_Contig_13914 10 . A T 964.849 . AB=0.245989;ABP=107.81;AC=6;AF=0.5;AN=12;AO=46;CIGAR=1X;DP=187;DPB=187;DPRA=0;EPP=102.898;EPPR=309.188;GTI=0;LEN=1;MEANALT=1;MQM=57.2174;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.0652174;PAIREDR=0.907801;PAO=0;PQA=0;PQR=0;PRO=0;QA=1802;QR=5571;RO=141;RPL=0;RPP=102.898;RPPR=309.188;RPR=46;RUN=1;SAF=46;SAP=102.898;SAR=0;SRF=141;SRP=309.188;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:14,11:14:526:11:433:-31.7732,0,-40.1386 0/1:45:38,7:38:1509:7:275:-11.5338,0,-122.511 0/1:60:54,6:54:2159:6:242:-4.06975,0,-176.427 0/1:39:29,10:29:1139:10:384:-22.9518,0,-91.0471 0/1:9:2,7:2:78:7:279:-22.7409,0,-4.69403 0/1:9:4,5:4:160:5:189:-14.6364,0,-12.0742 dDocent_Contig_13915 45 . G C 1169.14 . AB=0.390909;ABP=14.3809;AC=4;AF=0.5;AN=8;AO=43;CIGAR=1X;DP=110;DPB=110;DPRA=0;EPP=96.3836;EPPR=148.499;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1733;QR=2669;RO=67;RPL=0;RPP=96.3836;RPPR=148.499;RPR=43;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=67;SRP=148.499;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:26:7,19:7:280:19:757:-60.623,0,-17.7452 0/1:17:15,2:15:605:2:82:-2.66217,0,-49.6704 0/1:37:20,17:20:776:17:690:-51.2906,0,-59.012 0/1:30:25,5:25:1008:5:204:-9.71313,0,-81.9829 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13917 35 . G C 5316.62 . AB=0.729592;ABP=92.7497;AC=6;AF=0.5;AN=12;AO=168;CIGAR=1X;DP=231;DPB=231;DPRA=5.575;EPP=367.818;EPPR=139.813;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6709;QR=2457;RO=63;RPL=0;RPP=367.818;RPPR=139.813;RPR=168;RUN=1;SAF=168;SAP=367.818;SAR=0;SRF=63;SRP=139.813;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:22,15:22:873:15:586:-41.9346,0,-67.7379 0/1:42:12,30:12:474:30:1189:-94.6408,0,-30.3626 0/1:50:12,38:12:460:38:1505:-120.648,0,-26.6914 0/1:67:7,60:7:275:60:2435:-199.115,0,-4.94829 0/0:8:8,0:8:299:0:0:0,-2.40824,-27.2586 1/1:27:2,25:2:76:25:994:-82.5458,-0.913554,0 dDocent_Contig_13919 58 . G T 219.635 . AB=0.314286;ABP=13.4954;AC=3;AF=0.25;AN=12;AO=11;CIGAR=1X;DP=86;DPB=86;DPRA=0.686275;EPP=26.8965;EPPR=165.871;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.636364;PAIREDR=0.906667;PAO=0;PQA=0;PQR=0;PRO=0;QA=407;QR=2773;RO=75;RPL=11;RPP=26.8965;RPPR=165.871;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=75;SRP=165.871;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:8:6,2:6:231:2:78:-4.99523,0,-18.7494 0/0:18:18,0:18:671:0:0:0,-5.41854,-60.7176 0/1:15:10,5:10:390:5:184:-12.3997,0,-30.9433 0/0:10:10,0:10:342:0:0:0,-3.0103,-31.1002 0/0:23:23,0:23:833:0:0:0,-6.92369,-75.2803 0/1:12:8,4:8:306:4:145:-9.79035,0,-24.2882 dDocent_Contig_13920 23 . T C 442.377 . AB=0.228261;ABP=62.0177;AC=3;AF=0.25;AN=12;AO=21;CIGAR=1X;DP=242;DPB=242;DPRA=0.613333;EPP=48.6112;EPPR=478.563;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=846;QR=8711;RO=219;RPL=0;RPP=48.6112;RPPR=478.563;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=219;SRP=478.563;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:54:53,0:53:2115:0:0:0,-15.9546,-190.121 0/0:48:48,0:48:1916:0:0:0,-14.4494,-172.635 0/1:20:17,3:17:672:3:123:-5.44419,0,-54.7885 0/0:48:48,0:48:1913:0:0:0,-14.4494,-172.371 0/1:45:34,11:34:1337:11:443:-26.6797,0,-107.045 0/1:27:19,7:19:758:7:280:-17.3357,0,-60.3033 dDocent_Contig_13921 43 . A G 700.272 . AB=0.621622;ABP=7.76406;AC=1;AF=0.0833333;AN=12;AO=23;CIGAR=1X;DP=238;DPB=238;DPRA=0.920398;EPP=52.9542;EPPR=469.877;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=912;QR=8355;RO=215;RPL=0;RPP=52.9542;RPPR=469.877;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=215;SRP=469.877;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:37:14,23:14:521:23:912:-71.2491,0,-36.0768 0/0:89:89,0:89:3467:0:0:0,-26.7917,-312.093 0/0:50:50,0:50:1912:0:0:0,-15.0515,-172.294 0/0:40:40,0:40:1582:0:0:0,-12.0412,-142.619 0/0:15:15,0:15:592:0:0:0,-4.51545,-53.6201 0/0:7:7,0:7:281:0:0:0,-2.10721,-25.6626 dDocent_Contig_13922 27 . A C 588.258 . AB=0.42;ABP=5.78978;AC=3;AF=0.3;AN=10;AO=22;CIGAR=1X;DP=70;DPB=70;DPRA=4.125;EPP=50.7827;EPPR=107.241;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0.863636;PAIREDR=0.979167;PAO=0;PQA=0;PQR=0;PRO=0;QA=896;QR=1910;RO=48;RPL=0;RPP=50.7827;RPPR=107.241;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=48;SRP=107.241;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:10:9,1:9:353:1:39:-0.886264,0,-29.1194 0/1:23:9,14:9:360:14:571:-44.808,0,-25.8385 0/1:17:11,6:11:436:6:245:-17.312,0,-34.4732 0/0:16:15,1:15:600:1:41:0,-0.721913,-50.2408 0/0:4:4,0:4:161:0:0:0,-1.20412,-14.8753 ./.:.:.:.:.:.:.:. dDocent_Contig_13923 41 . G A 2311.51 . AB=0.568345;ABP=8.64988;AC=6;AF=0.5;AN=12;AO=79;CIGAR=1X;DP=139;DPB=139;DPRA=0;EPP=133.876;EPPR=133.299;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.822785;PAIREDR=0.866667;PAO=0;PQA=0;PQR=0;PRO=0;QA=3135;QR=2425;RO=60;RPL=5;RPP=133.876;RPPR=133.299;RPR=74;RUN=1;SAF=79;SAP=174.557;SAR=0;SRF=60;SRP=133.299;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:13,10:13:524:10:398:-29.2553,0,-40.5834 0/1:12:7,5:7:285:5:194:-14.2193,0,-22.412 0/1:24:16,8:16:642:8:317:-21.6708,0,-50.8894 0/1:27:6,21:6:242:21:843:-68.0574,0,-14.0291 0/1:22:7,15:7:285:15:586:-46.4546,0,-19.4017 0/1:31:11,20:11:447:20:797:-62.7151,0,-31.2531 dDocent_Contig_13924 90 . C T 3346.47 . AB=0.125;ABP=32.3252;AC=5;AF=0.416667;AN=12;AO=104;CIGAR=1X;DP=185;DPB=185;DPRA=2.08333;EPP=228.843;EPPR=176.728;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3802;QR=2769;RO=80;RPL=104;RPP=228.843;RPPR=176.728;RPR=0;RUN=1;SAF=104;SAP=228.843;SAR=0;SRF=80;SRP=176.728;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:935:0:0:0,-8.12781,-84.4648 0/1:24:21,3:21:718:3:108:-2.85045,0,-57.714 0/0:16:16,0:16:560:0:0:0,-4.81648,-50.7301 0/0:17:16,0:16:556:0:0:0,-4.81648,-50.0753 1/1:28:0,28:0:0:28:1027:-92.7452,-8.42884,0 1/1:73:0,73:0:0:73:2667:-240.263,-21.9752,0 dDocent_Contig_13926 21 . G A 4603.82 . AB=0.0463576;ABP=272.92;AC=0;AF=0;AN=12;AO=7;CIGAR=1M1D2M1X;DP=326;DPB=291.4;DPRA=0;EPP=18.2106;EPPR=328.731;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=59.9;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.92;PAO=0;PQA=0;PQR=0;PRO=0;QA=280;QR=5899;RO=150;RPL=0;RPP=18.2106;RPPR=328.731;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=150;SRP=328.731;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:44:12,4,27:12:475:4,27:158,1037:-81.5127,-72.1218,-110.016,0,-26.1056,-30.9811 0|0:74:30,1,43:30:1172:1,43:41,1615:-123.214,-128.86,-224.916,0,-92.9474,-83.3878 0|0:33:12,2,19:12:467:2,19:81,734:-56.6533,-53.5848,-91.3626,0,-31.6839,-32.6458 0|0:85:43,0,40:43:1691:0,40:0,1515:-111.221,-124.165,-263.258,0,-139.075,-127.034 0|0:43:28,0,14:28:1102:0,14:0,536:-35.5271,-43.956,-134.606,0,-90.6282,-86.4138 0|0:47:25,0,22:25:992:0,22:0,859:-63.4756,-71.0013,-152.661,0,-82.0527,-75.4301 dDocent_Contig_13927 164 . C A 1348.24 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=38;CIGAR=1X;DP=144;DPB=144;DPRA=1.79245;EPP=85.5263;EPPR=233.186;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1490;QR=4096;RO=106;RPL=38;RPP=85.5263;RPPR=233.186;RPR=0;RUN=1;SAF=0;SAP=85.5263;SAR=38;SRF=0;SRP=233.186;SRR=106;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1165:0:0:0,-9.0309,-105.135 0/0:32:32,0:32:1221:0:0:0,-9.63296,-110.161 0/0:10:10,0:10:392:0:0:0,-3.0103,-35.6378 0/0:32:32,0:32:1264:0:0:0,-9.63296,-114.036 1/1:38:0,38:0:0:38:1490:-134.347,-11.4391,0 0/0:2:2,0:2:54:0:0:0,-0.60206,-5.12739 dDocent_Contig_13928 160 . G A 882.602 . AB=0.154362;ABP=157.622;AC=4;AF=0.4;AN=10;AO=38;CIGAR=1X;DP=201;DPB=201;DPRA=3.05556;EPP=85.5263;EPPR=354.789;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1508;QR=5884;RO=162;RPL=38;RPP=85.5263;RPPR=354.789;RPR=0;RUN=1;SAF=0;SAP=85.5263;SAR=38;SRF=0;SRP=354.789;SRR=162;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:14:7,7:7:252:7:277:-21.0835,0,-18.8133 0/1:135:119,16:119:4328:16:627:-16.1227,0,-349.028 0/0:10:10,0:10:366:0:0:0,-3.0103,-33.2877 0/0:26:26,0:26:938:0:0:0,-7.82678,-84.7341 ./.:.:.:.:.:.:.:. 1/1:16:0,15:0:0:15:604:-54.3549,-4.51545,0 dDocent_Contig_13929 9 . C G 225.226 . AB=0.3;ABP=6.48466;AC=5;AF=0.416667;AN=12;AO=10;CIGAR=1X1M2X3M3I1M1X;DP=77;DPB=80.6667;DPRA=0.4625;EPP=24.725;EPPR=146.327;GTI=0;LEN=1;MEANALT=1.25;MQM=33.9;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=384;QR=2561;RO=66;RPL=0;RPP=24.725;RPPR=146.327;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=66;SRP=146.327;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:24:24,0:24:938:0:0:0,-7.22472,-84.7311 0|1:10:7,3:7:266:3:113:-6.21232,0,-21.2876 0|0:16:16,0:16:618:0:0:0,-4.81648,-55.9575 0|0:20:19,1:19:739:1:40:0,-2.79957,-63.615 1|1:1:0,1:0:0:1:40:-2.58309,-0.30103,0 1|1:6:0,5:0:0:5:191:-14.9484,-1.50515,0 dDocent_Contig_13931 47 . A G 180.55 . AB=0.0102041;ABP=207.217;AC=0;AF=0;AN=12;AO=5;CIGAR=1X3M1X;DP=474;DPB=474;DPRA=0.616858;EPP=13.8677;EPPR=913.177;GTI=0;LEN=1;MEANALT=2.5;MQM=49.2;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=0;PAIREDR=0.641379;PAO=0;PQA=0;PQR=0;PRO=0;QA=177;QR=16137;RO=435;RPL=5;RPP=13.8677;RPPR=947.601;RPR=0;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=431;SRP=913.177;SRR=4;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:121:115,0,4:115:4155:0,4:0,144:0,-34.6184,-373.732,-22.8897,-362.009,-360.805 0|0:98:87,1,9:87:3195:1,9:34,322:-0.10463,-23.544,-284.442,0,-258.489,-258.531 0|0:63:58,4,0:58:2213:4,0:143,0:0,-5.68816,-186.341,-17.4597,-187.545,-199.088 0|0:140:135,0,5:135:5087:0,5:0,177:0,-40.639,-457.489,-25.8685,-443.073,-441.568 0|0:24:20,0,3:20:750:0,3:0,107:-2.87152,-8.89212,-70.3854,0,-61.664,-60.7609 0|0:28:20,0,8:20:737:0,8:0,295:-18.3948,-24.4154,-84.6806,0,-60.6329,-58.2247 dDocent_Contig_13932 46 . T A 671.671 . AB=0.273585;ABP=50.2091;AC=3;AF=0.25;AN=12;AO=32;CIGAR=1X;DP=233;DPB=233;DPRA=0.903614;EPP=72.4974;EPPR=439.476;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.75;PAIREDR=0.323383;PAO=0;PQA=0;PQR=0;PRO=0;QA=1270;QR=7945;RO=201;RPL=0;RPP=72.4974;RPPR=439.476;RPR=32;RUN=1;SAF=32;SAP=72.4974;SAR=0;SRF=201;SRP=439.476;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:1012:0:0:0,-7.82678,-91.3761 0/1:41:30,11:30:1183:11:436:-27.25,0,-94.4039 0/1:23:15,8:15:591:8:313:-21.6072,0,-46.6075 0/1:42:32,10:32:1290:10:398:-23.5318,0,-103.72 0/0:44:41,3:41:1610:3:123:0,-1.78053,-133.672 0/0:57:57,0:57:2259:0:0:0,-17.1587,-203.475 dDocent_Contig_13934 11 . C T 323.098 . AB=0.205479;ABP=58.011;AC=1;AF=0.0833333;AN=12;AO=27;CIGAR=1X;DP=397;DPB=397;DPRA=2.28125;EPP=61.6401;EPPR=806.455;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=50.4108;NS=6;NUMALT=1;ODDS=0;PAIRED=0.703704;PAIREDR=0.997297;PAO=0;PQA=0;PQR=0;PRO=0;QA=1092;QR=14774;RO=370;RPL=0;RPP=61.6401;RPPR=806.455;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=370;SRP=806.455;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:73:58,15:58:2324:15:613:-33.5316,0,-161.997 0/0:37:35,2:35:1395:2:78:0,-3.73481,-92.0189 0/0:32:32,0:32:1269:0:0:0,-9.63296,-101.177 0/0:86:84,2:84:3368:2:82:0,-18.1089,-260.515 0/0:75:72,3:72:2867:3:121:0,-11.2971,-241.266 0/0:94:89,5:89:3551:5:198:0,-10.0994,-301.437 dDocent_Contig_13935 37 . G A 1058 . AB=0.304965;ABP=49.5969;AC=2;AF=0.166667;AN=12;AO=47;CIGAR=1X;DP=431;DPB=431;DPRA=1.23316;EPP=105.07;EPPR=832.513;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1823;QR=15205;RO=382;RPL=0;RPP=105.07;RPPR=832.513;RPR=47;RUN=1;SAF=47;SAP=105.07;SAR=0;SRF=382;SRP=832.513;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:59:44,15:44:1728:15:587:-35.4055,0,-137.988 0/0:97:93,4:93:3756:4:147:0,-15.6176,-324.455 0/0:65:65,0:65:2568:0:0:0,-19.5669,-231.251 0/1:82:54,28:54:2142:28:1089:-73.6159,0,-168.277 0/0:46:46,0:46:1847:0:0:0,-13.8474,-166.439 0/0:82:80,0:80:3164:0:0:0,-24.0824,-284.447 dDocent_Contig_13936 12 . T A 1515.82 . AB=0.328767;ABP=21.6017;AC=7;AF=0.583333;AN=12;AO=24;CIGAR=1X4M;DP=94;DPB=94;DPRA=0;EPP=55.1256;EPPR=89.8692;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.583333;PAIREDR=0.875;PAO=0;PQA=0;PQR=0;PRO=0;QA=953;QR=1605;RO=40;RPL=0;RPP=55.1256;RPPR=89.8692;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=40;SRP=89.8692;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:15:11,0,4:11:442:0,4:0,159:-10.1769,-13.4882,-49.9147,0,-36.8247,-35.6206 0|1:18:11,1,6:11:443:1,6:40,240:-16.4575,-16.4737,-52.6861,0,-33.2192,-34.7079 0|1:10:8,0,2:8:316:0,2:0,71:-3.73008,-6.13832,-32.1719,0,-26.3963,-25.7943 0|1:13:9,4,0:9:364:4,0:161,0:-10.9619,0,-29.2114,-13.6712,-30.4155,-43.684 0|1:8:1,7,0:1:40:7,0:259,0:-21.252,0,-1.58744,-21.553,-3.69465,-24.8519 1|1:30:0,18,12:0:0:18,12:723,483:-99.785,-40.2079,-34.7893,-59.9789,0,-56.3665 dDocent_Contig_13937 37 . A C 266.909 . AB=0.19697;ABP=55.6521;AC=1;AF=0.125;AN=8;AO=13;CIGAR=1X;DP=284;DPB=284;DPRA=0.908257;EPP=31.2394;EPPR=591.479;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=529;QR=10735;RO=271;RPL=0;RPP=31.2394;RPPR=591.479;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=271;SRP=591.479;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:66:53,13:53:2113:13:529:-28.0889,0,-170.483 0/0:122:122,0:122:4815:0:0:0,-36.7257,-433.258 0/0:48:48,0:48:1918:0:0:0,-14.4494,-172.825 0/0:48:48,0:48:1889:0:0:0,-14.4494,-170.218 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13938 31 . C G 1314.23 . AB=0.288344;ABP=66.4359;AC=5;AF=0.416667;AN=12;AO=51;CIGAR=1X;DP=217;DPB=217;DPRA=1.67;EPP=113.755;EPPR=363.475;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2048;QR=6644;RO=166;RPL=0;RPP=113.755;RPPR=363.475;RPR=51;RUN=1;SAF=51;SAP=113.755;SAR=0;SRF=166;SRP=363.475;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:57:28,29:28:1134:29:1156:-87.1546,0,-85.1764 0/1:68:60,8:60:2386:8:323:-8.96855,0,-194.414 0/0:46:46,0:46:1844:0:0:0,-13.8474,-166.149 0/1:38:28,10:28:1118:10:405:-25.3715,0,-89.4578 1/1:4:0,4:0:0:4:164:-15.1499,-1.20412,0 0/0:4:4,0:4:162:0:0:0,-1.20412,-14.9667 dDocent_Contig_13940 28 . T A 285.126 . AB=0.27907;ABP=21.2406;AC=2;AF=0.166667;AN=12;AO=18;CIGAR=1X;DP=145;DPB=145;DPRA=1.50588;EPP=42.0968;EPPR=278.787;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=733;QR=5089;RO=127;RPL=0;RPP=42.0968;RPPR=278.787;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=127;SRP=278.787;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:29,2:29:1157:2:81:0,-1.6462,-96.7203 0/0:39:36,3:36:1441:3:123:0,-0.275381,-118.476 0/1:25:20,5:20:794:5:204:-11.2183,0,-64.2467 0/1:18:11,7:11:440:7:284:-20.5155,0,-34.5351 0/0:17:17,0:17:690:0:0:0,-5.11751,-62.4287 0/0:15:14,1:14:567:1:41:0,-0.420883,-47.2768 dDocent_Contig_13941 84 . G A 4295.85 . AB=0.625899;ABP=41.2845;AC=3;AF=0.3;AN=10;AO=174;CIGAR=1X;DP=314;DPB=314;DPRA=5.14815;EPP=380.846;EPPR=307.016;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5753;QR=5186;RO=140;RPL=174;RPP=380.846;RPPR=307.016;RPR=0;RUN=1;SAF=174;SAP=380.846;SAR=0;SRF=140;SRP=307.016;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:107:20,87:20:723:87:2882:-227.412,0,-33.1847 0/1:88:62,26:62:2250:26:845:-49.8589,0,-176.264 0/1:83:22,61:22:846:61:2026:-157.614,0,-51.4774 0/0:35:35,0:35:1330:0:0:0,-10.536,-119.988 ./.:.:.:.:.:.:.:. 0/0:1:1,0:1:37:0:0:0,-0.30103,-3.69783 dDocent_Contig_13942 7 . A T 119.533 . AB=0.24;ABP=17.6895;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1X;DP=167;DPB=167;DPRA=0.880282;EPP=16.0391;EPPR=352.617;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.565217;PAO=0;PQA=0;PQR=0;PRO=0;QA=226;QR=6192;RO=161;RPL=0;RPP=16.0391;RPPR=352.617;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=161;SRP=352.617;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:19,6:19:731:6:226:-13.1752,0,-58.5955 0/0:45:45,0:45:1738:0:0:0,-13.5463,-156.675 0/0:19:19,0:19:728:0:0:0,-5.71957,-65.8502 0/0:34:34,0:34:1304:0:0:0,-10.235,-117.649 0/0:25:25,0:25:959:0:0:0,-7.52575,-86.6238 0/0:19:19,0:19:732:0:0:0,-5.71957,-66.2105 dDocent_Contig_13943 116 . G T 278.821 . AB=0.342105;ABP=11.239;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=1X;DP=77;DPB=77;DPRA=2.5;EPP=33.4109;EPPR=139.813;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=472;QR=2097;RO=63;RPL=0;RPP=33.4109;RPPR=139.813;RPR=14;RUN=1;SAF=0;SAP=33.4109;SAR=14;SRF=0;SRP=139.813;SRR=63;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:10:10,0:10:331:0:0:0,-3.0103,-30.1103 0/0:1:1,0:1:35:0:0:0,-0.30103,-3.49863 0/0:17:16,1:16:557:1:7:0,-4.41751,-49.759 0/0:11:11,0:11:351:0:0:0,-3.31133,-31.8981 0/1:27:17,10:17:545:10:359:-24.5258,0,-41.2264 0/1:11:8,3:8:278:3:106:-6.57777,0,-22.0467 dDocent_Contig_13944 10 . A G 362.262 . AB=0.164557;ABP=80.2213;AC=5;AF=0.416667;AN=12;AO=18;CIGAR=1X;DP=95;DPB=95;DPRA=3.81818;EPP=42.0968;EPPR=170.214;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.333333;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=708;QR=3073;RO=77;RPL=0;RPP=42.0968;RPPR=170.214;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=77;SRP=170.214;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:7:7,0:7:270:0:0:0,-2.10721,-24.6623 0/1:23:18,5:18:709:5:191:-10.6322,0,-57.2117 0/1:37:33,4:33:1327:4:160:-3.64569,0,-108.548 0/1:19:15,4:15:603:4:162:-9.24739,0,-48.8859 1/1:5:0,5:0:0:5:195:-17.921,-1.50515,0 0/0:4:4,0:4:164:0:0:0,-1.20412,-15.1499 dDocent_Contig_13945 25 . G A 597.699 . AB=0.179487;ABP=37.8095;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=3M1I13M1X;DP=213;DPB=231.412;DPRA=0.886364;EPP=18.2106;EPPR=300.502;GTI=0;LEN=1;MEANALT=4;MQM=60;MQMR=60;NS=6;NUMALT=9;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=265;QR=5300;RO=137;RPL=0;RPP=18.2106;RPPR=300.502;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=137;SRP=300.502;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:61:49,3,5,0,0,0,0,0,0,1:49:1889:3,5,0,0,0,0,0,0,1:102,154,0,0,0,0,0,0,39:0,-6.74584,-161.001,-2.96296,-150.101,-156.597,-14.7505,-161.904,-158.102,-169.906,-14.7505,-161.904,-158.102,-169.906,-169.906,-14.7505,-161.904,-158.102,-169.906,-169.906,-169.906,-14.7505,-161.904,-158.102,-169.906,-169.906,-169.906,-169.906,-14.7505,-161.904,-158.102,-169.906,-169.906,-169.906,-169.906,-169.906,-14.7505,-161.904,-158.102,-169.906,-169.906,-169.906,-169.906,-169.906,-169.906,-11.539,-158.698,-154.896,-166.7,-166.7,-166.7,-166.7,-166.7,-166.7,-166.399 0|0:41:33,0,5,0,0,0,0,0,0,1:33:1273:0,5,0,0,0,0,0,0,1:0,112,0,0,0,0,0,0,39:0,-9.93399,-114.555,-1.72194,-106.275,-104.77,-9.93399,-114.555,-106.275,-114.555,-9.93399,-114.555,-106.275,-114.555,-114.555,-9.93399,-114.555,-106.275,-114.555,-114.555,-114.555,-9.93399,-114.555,-106.275,-114.555,-114.555,-114.555,-114.555,-9.93399,-114.555,-106.275,-114.555,-114.555,-114.555,-114.555,-114.555,-9.93399,-114.555,-106.275,-114.555,-114.555,-114.555,-114.555,-114.555,-114.555,-6.71116,-111.349,-103.069,-111.349,-111.349,-111.349,-111.349,-111.349,-111.349,-111.048 0|0:30:26,0,1,0,0,0,0,0,0,0:26:1000:0,1,0,0,0,0,0,0,0:0,37,0,0,0,0,0,0,0:0,-7.82678,-89.9308,-4.80092,-86.9054,-86.6044,-7.82678,-89.9308,-86.9054,-89.9308,-7.82678,-89.9308,-86.9054,-89.9308,-89.9308,-7.82678,-89.9308,-86.9054,-89.9308,-89.9308,-89.9308,-7.82678,-89.9308,-86.9054,-89.9308,-89.9308,-89.9308,-89.9308,-7.82678,-89.9308,-86.9054,-89.9308,-89.9308,-89.9308,-89.9308,-89.9308,-7.82678,-89.9308,-86.9054,-89.9308,-89.9308,-89.9308,-89.9308,-89.9308,-89.9308,-7.82678,-89.9308,-86.9054,-89.9308,-89.9308,-89.9308,-89.9308,-89.9308,-89.9308,-89.9308 0|1:39:29,0,0,0,0,0,0,0,7,1:29:1138:0,0,0,0,0,0,0,7,1:0,0,0,0,0,0,0,265,34:-13.1204,-21.8503,-115.492,-21.8503,-115.492,-115.492,-21.8503,-115.492,-115.492,-115.492,-21.8503,-115.492,-115.492,-115.492,-115.492,-21.8503,-115.492,-115.492,-115.492,-115.492,-115.492,-21.8503,-115.492,-115.492,-115.492,-115.492,-115.492,-115.492,-21.8503,-115.492,-115.492,-115.492,-115.492,-115.492,-115.492,-115.492,0,-93.7678,-93.7678,-93.7678,-93.7678,-93.7678,-93.7678,-93.7678,-91.6606,-19.0905,-112.735,-112.735,-112.735,-112.735,-112.735,-112.735,-112.735,-91.0109,-112.434 0|0:18:0,3,0,4,2,2,2,0,0,4:0:0:3,0,4,2,2,2,0,0,4:107,0,100,42,13,49,0,0,156:-21.6116,-12.8723,-11.9692,-21.6116,-12.8723,-21.6116,-13.8278,-5.08411,-13.8278,-12.6237,-18.984,-10.2447,-18.984,-11.2051,-18.3819,-21.2003,-12.4645,-21.2003,-13.4264,-18.5781,-20.5982,-17.8446,-9.10354,-17.8446,-10.0631,-15.2191,-17.4376,-17.2426,-21.6116,-12.8723,-21.6116,-13.8278,-18.984,-21.2003,-17.8446,-21.6116,-21.6116,-12.8723,-21.6116,-13.8278,-18.984,-21.2003,-17.8446,-21.6116,-21.6116,-8.7546,0,-8.7546,-0.959924,-6.12518,-8.34657,-4.98321,-8.7546,-8.7546,-7.55048 0|0:24:0,8,2,2,3,0,2,3,0,3:0:0:8,2,2,3,0,2,3,0,3:262,66,73,49,0,62,36,0,116:-30.2519,-9.56006,-7.15182,-25.4531,-4.75645,-24.851,-24.279,-3.57902,-19.4792,-23.677,-27.3145,-6.62854,-22.5173,-21.3423,-26.4114,-30.2519,-9.56006,-25.4531,-24.279,-27.3145,-30.2519,-25.2715,-4.57434,-20.4721,-19.2975,-22.3355,-25.2715,-24.6694,-27.9368,-7.25285,-23.1399,-21.9649,-25.0061,-27.9368,-22.9582,-27.0337,-30.2519,-9.56006,-25.4531,-24.279,-27.3145,-30.2519,-25.2715,-27.9368,-30.2519,-20.7073,0,-15.9065,-14.7315,-17.7703,-20.7073,-15.7247,-18.3932,-20.7073,-19.8042 dDocent_Contig_13946 36 . A G 310.386 . AB=0.242424;ABP=41.044;AC=4;AF=0.333333;AN=12;AO=17;CIGAR=1X;DP=182;DPB=182;DPRA=0.228235;EPP=39.9253;EPPR=361.303;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=669;QR=6429;RO=165;RPL=0;RPP=39.9253;RPPR=361.303;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=165;SRP=361.303;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:85:85,0:85:3320:0:0:0,-25.5875,-298.894 0/1:30:26,4:26:1018:4:157:-5.4779,0,-82.89 0/1:8:5,3:5:185:3:120:-8.77945,0,-14.5974 0/0:31:30,1:30:1154:1:40:0,-5.33625,-100.145 0/1:22:17,5:17:672:5:195:-11.3014,0,-54.1864 0/1:6:2,4:2:80:4:157:-12.7017,0,-5.78561 dDocent_Contig_13949 127 . A T 102.77 . AB=0.444444;ABP=3.25157;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1M1I1M1X;DP=61;DPB=62.3333;DPRA=0.865385;EPP=11.6962;EPPR=126.784;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.807018;PAO=0;PQA=0;PQR=0;PRO=0;QA=157;QR=2261;RO=57;RPL=4;RPP=11.6962;RPPR=126.784;RPR=0;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=126.784;SRR=57;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:1:1,0:1:41:0:0:0,-0.30103,-4.09457 0|0:11:11,0:11:431:0:0:0,-3.31133,-39.1354 0|0:5:5,0:5:203:0:0:0,-1.50515,-18.6531 0|0:18:18,0:18:717:0:0:0,-5.41854,-64.8553 0|0:17:17,0:17:674:0:0:0,-5.11751,-60.9915 0|1:9:5,4:5:195:4:157:-11.7995,0,-15.2134 dDocent_Contig_13950 195 . T C 402.784 . AB=0.32;ABP=17.0814;AC=1;AF=0.125;AN=8;AO=16;CIGAR=1X;DP=143;DPB=143;DPRA=1.6129;EPP=37.7539;EPPR=278.787;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=630;QR=4997;RO=127;RPL=16;RPP=37.7539;RPPR=278.787;RPR=0;RUN=1;SAF=0;SAP=37.7539;SAR=16;SRF=0;SRP=278.787;SRR=127;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1147:0:0:0,-9.0309,-103.501 0/0:56:56,0:56:2237:0:0:0,-16.8577,-201.501 0/0:7:7,0:7:280:0:0:0,-2.10721,-25.5707 0/1:50:34,16:34:1333:16:630:-41.9774,0,-105.183 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13951 26 . C T 1218.8 . AB=0.109091;ABP=149.012;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=2X;DP=341;DPB=341;DPRA=0.964912;EPP=29.068;EPPR=587.136;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.666667;PAIREDR=0.650558;PAO=0;PQA=0;PQR=0;PRO=0;QA=468;QR=10584;RO=269;RPL=0;RPP=29.068;RPPR=587.136;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=269;SRP=587.136;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:57:53,0,3:53:2090:0,3:0,123:0,-15.9546,-187.911,-5.71273,-177.757,-176.854 0|0:75:66,0,9:66:2619:0,9:0,364:-10.5471,-30.4151,-245.992,0,-215.98,-213.271 0|0:43:25,0,18:25:994:0,18:0,729:-52.9906,-60.5164,-142.347,0,-82.2318,-76.8133 0|0:56:43,0,13:43:1701:0,13:0,525:-30.7385,-43.6827,-183.656,0,-140.375,-136.462 0|0:63:46,5,12:46:1810:5,12:200,480:-25.6915,-23.0641,-170.433,0,-132.398,-145.261 0|1:47:36,7,4:36:1370:7,4:268,163:-11.1344,0,-110.208,-8.51524,-98.865,-119.648 dDocent_Contig_13952 15 . A C 266.374 . AB=0.197183;ABP=59.5603;AC=2;AF=0.166667;AN=12;AO=15;CIGAR=1X;DP=204;DPB=204;DPRA=1.26667;EPP=35.5824;EPPR=413.419;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.2;PAIREDR=0.534392;PAO=0;PQA=0;PQR=0;PRO=0;QA=590;QR=7513;RO=189;RPL=0;RPP=35.5824;RPPR=413.419;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=189;SRP=413.419;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:30,6:30:1200:6:241:-11.2292,0,-97.4404 0/1:35:27,8:27:1080:8:320:-18.63,0,-86.951 0/0:20:20,0:20:795:0:0:0,-6.0206,-71.8682 0/0:43:42,1:42:1641:1:29:0,-10.0446,-145.017 0/0:47:47,0:47:1872:0:0:0,-14.1484,-168.69 0/0:23:23,0:23:925:0:0:0,-6.92369,-83.5507 dDocent_Contig_13953 14 . A T 133.115 . AB=0.190476;ABP=37.9607;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=269;DPB=269;DPRA=0.379487;EPP=22.5536;EPPR=567.593;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=356;QR=10175;RO=260;RPL=0;RPP=22.5536;RPPR=567.593;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=260;SRP=567.593;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:31,1:31:1175:1:41:0,-5.53839,-101.921 0/1:20:18,2:18:730:2:81:-1.66513,0,-60.0039 0/0:6:6,0:6:244:0:0:0,-1.80618,-22.3388 0/1:22:16,6:16:624:6:234:-14.8021,0,-49.87 0/0:149:149,0:149:5839:0:0:0,-44.8535,-525.336 0/0:40:40,0:40:1563:0:0:0,-12.0412,-140.91 dDocent_Contig_13954 209 . N G 111.664 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:82:-7.11762,-0.60206,0 1/1:1:0,1:0:0:1:41:-3.74612,-0.30103,0 dDocent_Contig_13955 34 . A C 275.757 . AB=0.235294;ABP=34.0496;AC=1;AF=0.0833333;AN=12;AO=12;CIGAR=1X;DP=390;DPB=390;DPRA=0.752212;EPP=29.068;EPPR=823.827;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.997354;PAO=0;PQA=0;PQR=0;PRO=0;QA=490;QR=15036;RO=378;RPL=0;RPP=29.068;RPPR=823.827;RPR=12;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=378;SRP=823.827;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:48,0:48:1918:0:0:0,-14.4494,-172.822 0/0:109:109,0:109:4365:0:0:0,-32.8123,-392.795 0/0:45:45,0:45:1798:0:0:0,-13.5463,-162.037 0/0:57:57,0:57:2254:0:0:0,-17.1587,-203.036 0/0:80:80,0:80:3195:0:0:0,-24.0824,-287.625 0/1:51:39,12:39:1506:12:490:-29.0986,0,-120.43 dDocent_Contig_13956 38 . C A 152.636 . AB=0.0833333;ABP=39.2015;AC=3;AF=0.25;AN=12;AO=6;CIGAR=1X;DP=180;DPB=180;DPRA=0.368421;EPP=16.0391;EPPR=380.846;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=242;QR=6932;RO=174;RPL=0;RPP=16.0391;RPPR=380.846;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=174;SRP=380.846;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:55:55,0:55:2151:0:0:0,-16.5566,-193.764 0/0:18:18,0:18:719:0:0:0,-5.41854,-65.0357 0/0:16:16,0:16:646:0:0:0,-4.81648,-58.4734 0/0:63:63,0:63:2549:0:0:0,-18.9649,-229.535 1/1:4:0,4:0:0:4:160:-14.7838,-1.20412,0 0/1:24:22,2:22:867:2:82:-0.554958,0,-71.107 dDocent_Contig_13957 13 . G A 16491.9 . AB=0.572973;ABP=45.7942;AC=6;AF=0.5;AN=12;AO=530;CIGAR=1M1X3M1X3M;DP=925;DPB=925;DPRA=0;EPP=1153.89;EPPR=393.923;GTI=0;LEN=1;MEANALT=5.83333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=0.98913;PAO=0;PQA=0;PQR=0;PRO=0;QA=20858;QR=7171;RO=184;RPL=0;RPP=1153.89;RPPR=402.561;RPR=530;RUN=1;SAF=530;SAP=1153.89;SAR=0;SRF=183;SRP=393.923;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:105:17,6,14,63:17:669:6,14,63:243,527,2473:-198.269,-183.348,-236.576,-160.219,-195.214,-211.038,0,-34.996,-11.8719,-36.0712 0|1:182:45,5,9,118:45:1752:5,9,118:190,355,4651:-369.1,-367.065,-509.546,-353.437,-481.842,-494.714,0,-128.406,-114.777,-108.466 0|1:114:25,0,9,69:25:965:0,9,69:0,356,2701:-214.54,-222.066,-301.314,-192.767,-272.015,-269.306,0,-79.2411,-49.942,-58.47 0|1:204:39,5,19,119:39:1535:5,19,119:195,742,4687:-373.842,-369.553,-494.321,-324.586,-434.83,-445.14,0,-110.244,-65.2773,-90.4498 0|1:179:35,16,26,95:35:1351:16,26,95:639,1004,3746:-297.663,-255.568,-361.696,-225.75,-284.062,-328.867,0,-58.3103,-28.4937,-82.346 0|1:141:23,18,23,66:23:899:18,23,66:713,894,2600:-206.974,-155.213,-223.705,-140.437,-155.662,-207.424,0,-15.2245,-0.450043,-54.043 dDocent_Contig_13958 56 . T C 511.829 . AB=0.328358;ABP=20.1552;AC=3;AF=0.25;AN=12;AO=27;CIGAR=1X;DP=206;DPB=206;DPRA=1.38462;EPP=61.6401;EPPR=391.704;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994413;PAO=0;PQA=0;PQR=0;PRO=0;QA=1033;QR=7012;RO=179;RPL=27;RPP=61.6401;RPPR=391.704;RPR=0;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=179;SRP=391.704;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:1021:0:0:0,-7.82678,-92.1891 0/0:46:43,3:43:1698:3:115:0,-3.12317,-142.329 0/0:67:65,2:65:2547:2:79:0,-12.6714,-221.882 0/1:33:27,6:27:1043:6:240:-12.0417,0,-84.2256 0/1:14:3,11:3:116:11:418:-33.7458,0,-6.60109 0/1:20:15,5:15:587:5:181:-10.6173,0,-47.1449 dDocent_Contig_13959 14 . C T 51.5078 . AB=0.119403;ABP=87.3088;AC=3;AF=0.25;AN=12;AO=9;CIGAR=1X;DP=114;DPB=114;DPRA=2.21429;EPP=22.5536;EPPR=228.843;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=353;QR=4148;RO=104;RPL=0;RPP=22.5536;RPPR=228.843;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=104;SRP=228.843;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:20,2:20:767:2:79:-0.874972,0,-62.7181 0/1:22:19,3:19:772:3:114:-4.00956,0,-63.1756 0/1:23:20,3:20:788:3:121:-4.3563,0,-64.3076 0/0:20:20,0:20:813:0:0:0,-6.0206,-73.4846 0/0:26:24,1:24:967:1:39:0,-3.87401,-83.5616 0/0:1:1,0:1:41:0:0:0,-0.30103,-4.09457 dDocent_Contig_13960 22 . G A 374.409 . AB=0.269841;ABP=31.9977;AC=4;AF=0.5;AN=8;AO=17;CIGAR=1X;DP=63;DPB=63;DPRA=0;EPP=39.9253;EPPR=102.898;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=0.882353;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=688;QR=1859;RO=46;RPL=0;RPP=39.9253;RPPR=102.898;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=46;SRP=102.898;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:13:8,5:8:328:5:203:-14.7397,0,-25.977 0/1:24:20,4:20:801:4:164:-7.92518,0,-65.1818 0/1:19:12,7:12:491:7:283:-20.1238,0,-38.8214 0/1:7:6,1:6:239:1:38:-1.69006,0,-19.776 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13962 13 . A T 494.188 . AB=0.177778;ABP=84.1751;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=3X;DP=200;DPB=200;DPRA=0.769231;EPP=37.7539;EPPR=343.931;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=0.6875;PAIREDR=0.834395;PAO=0;PQA=0;PQR=0;PRO=0;QA=602;QR=6093;RO=157;RPL=0;RPP=37.7539;RPPR=343.931;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=157;SRP=343.931;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:31:30,0,1:30:1163:0,1:0,38:0,-9.0309,-104.574,-5.53466,-101.458,-101.157 0|0:47:44,0,3:44:1717:0,3:0,115:0,-13.2453,-154.389,-3.42352,-144.951,-144.048 0|1:10:8,2,0:8:305:2,0:76,0:-4.20451,0,-24.799,-6.61275,-25.4011,-31.6339 0|0:32:26,0,6:26:1024:0,6:0,223:-10.795,-18.6218,-102.881,0,-84.6345,-82.8283 0|1:45:28,9,7:28:1070:9,7:341,252:-19.5474,0,-85.1097,-7.42034,-67.264,-93.1161 0|0:35:21,5,9:21:814:5,9:185,346:-22.0933,-13.2863,-78.6536,0,-51.754,-64.1752 dDocent_Contig_13963 15 . A T 4064.18 . AB=0;ABP=0;AC=4;AF=0.333333;AN=12;AO=119;CIGAR=1X;DP=191;DPB=191;DPRA=3.78788;EPP=261.416;EPPR=159.356;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=1;PAIREDR=0.847222;PAO=0;PQA=0;PQR=0;PRO=0;QA=4749;QR=2897;RO=72;RPL=0;RPP=261.416;RPPR=159.356;RPR=119;RUN=1;SAF=119;SAP=261.416;SAR=0;SRF=72;SRP=159.356;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:16:16,0:16:648:0:0:0,-4.81648,-58.6532 0/0:7:7,0:7:279:0:0:0,-2.10721,-25.48 0/0:6:6,0:6:240:0:0:0,-1.80618,-21.9751 0/0:37:37,0:37:1489:0:0:0,-11.1381,-134.255 1/1:26:0,26:0:0:26:1054:-95.149,-7.82678,0 1/1:99:6,93:6:241:93:3695:-310.491,-7.73509,0 dDocent_Contig_13964 31 . G A 34.2846 . AB=0.113636;ABP=60.0608;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=334;DPB=334;DPRA=0.739583;EPP=22.5536;EPPR=708.739;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.987692;PAO=0;PQA=0;PQR=0;PRO=0;QA=361;QR=12891;RO=325;RPL=0;RPP=22.5536;RPPR=708.739;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=325;SRP=708.739;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:56:56,0:56:2199:0:0:0,-16.8577,-198.077 0/0:44:42,2:42:1687:2:81:0,-5.55959,-144.367 0/0:54:52,2:52:2052:2:82:0,-8.47594,-177.085 0/1:44:39,5:39:1536:5:198:-4.95118,0,-125.225 0/0:67:67,0:67:2691:0:0:0,-20.169,-242.306 0/0:69:69,0:69:2726:0:0:0,-20.7711,-245.457 dDocent_Contig_13965 55 . T C 1552 . AB=0.363636;ABP=29.6602;AC=5;AF=0.416667;AN=12;AO=60;CIGAR=1X;DP=190;DPB=190;DPRA=1.32;EPP=133.299;EPPR=285.302;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.916667;PAIREDR=0.984615;PAO=0;PQA=0;PQR=0;PRO=0;QA=2349;QR=5115;RO=130;RPL=60;RPP=133.299;RPPR=285.302;RPR=0;RUN=1;SAF=60;SAP=133.299;SAR=0;SRF=130;SRP=285.302;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:35:20,15:20:773:15:589:-42.8005,0,-59.3538 0/1:35:30,5:30:1193:5:189:-6.83609,0,-97.115 0/0:25:25,0:25:966:0:0:0,-7.52575,-87.2376 0/1:34:31,3:31:1219:3:121:-1.04518,0,-99.7469 0/1:27:9,18:9:360:18:704:-55.5536,0,-24.6349 0/1:34:15,19:15:604:19:746:-57.2234,0,-44.4635 dDocent_Contig_13968 8 . A C 422.849 . AB=0.171429;ABP=35.8306;AC=4;AF=0.333333;AN=12;AO=6;CIGAR=2X;DP=103;DPB=103;DPRA=0.972222;EPP=16.0391;EPPR=170.214;GTI=0;LEN=1;MEANALT=1.5;MQM=53;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.896104;PAO=0;PQA=0;PQR=0;PRO=0;QA=226;QR=2942;RO=77;RPL=0;RPP=16.0391;RPPR=170.214;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=77;SRP=170.214;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:15:11,0,4:11:422:0,4:0,152:-9.49275,-12.8041,-47.4458,0,-35.0216,-33.8175 0|0:22:20,2,0:20:766:2,0:78,0:0,-0.117817,-62.7631,-6.0206,-63.3652,-68.922 0|1:3:1,2,0:1:39:2,0:77,0:-5.56755,0,-2.99347,-5.86858,-3.59553,-9.09082 0|1:20:11,7,2:11:421:7,2:271,74:-15.5492,0,-32.4537,-12.8161,-28.5264,-46.7935 0|1:29:20,9,0:20:753:9,0:337,0:-18.8894,0,-59.3652,-24.91,-62.0744,-86.6354 0|0:14:14,0,0:14:541:0,0:0,0:0,-4.21442,-49.0359,-4.21442,-49.0359,-49.0359 dDocent_Contig_13969 111 . A G 92.1616 . AB=0.153846;ABP=70.66;AC=2;AF=0.166667;AN=12;AO=12;CIGAR=1X;DP=193;DPB=193;DPRA=0.949495;EPP=29.068;EPPR=396.047;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.701657;PAO=0;PQA=0;PQR=0;PRO=0;QA=413;QR=6204;RO=181;RPL=0;RPP=29.068;RPPR=396.047;RPR=12;RUN=1;SAF=0;SAP=29.068;SAR=12;SRF=0;SRP=396.047;SRR=181;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:27,2:27:921:2:65:0,-2.55634,-77.0279 0/1:36:30,6:30:1031:6:208:-8.22251,0,-82.2614 0/1:29:25,4:25:870:4:140:-4.21506,0,-69.8882 0/0:37:37,0:37:1240:0:0:0,-11.1381,-111.896 0/0:23:23,0:23:802:0:0:0,-6.92369,-72.5009 0/0:39:39,0:39:1340:0:0:0,-11.7402,-120.9 dDocent_Contig_13970 107 . N T 1103.76 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=35;CIGAR=1X;DP=35;DPB=35;DPRA=0;EPP=79.0118;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1210;QR=0;RO=0;RPL=0;RPP=79.0118;RPPR=0;RPR=35;RUN=1;SAF=0;SAP=79.0118;SAR=35;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:7:0,7:0:0:7:244:-22.3001,-2.10721,0 1/1:25:0,25:0:0:25:862:-77.8957,-7.52575,0 ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:104:-9.70309,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13971 8 . A G 265.096 . AB=0.236364;ABP=36.2141;AC=2;AF=0.166667;AN=12;AO=18;CIGAR=1X;DP=202;DPB=202;DPRA=1.21186;EPP=42.0968;EPPR=402.561;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=700;QR=6991;RO=184;RPL=0;RPP=42.0968;RPPR=402.561;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=184;SRP=402.561;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:1091:0:0:0,-8.72987,-98.4931 0/0:30:30,0:30:1151:0:0:0,-9.0309,-103.889 0/1:40:29,11:29:1115:11:428:-26.8342,0,-88.6118 0/1:15:13,2:13:491:2:78:-2.88802,0,-40.0158 0/0:58:55,3:55:2082:3:116:0,-6.64203,-176.794 0/0:30:28,2:28:1061:2:78:0,-1.62743,-88.3923 dDocent_Contig_13972 15 . C T 987.925 . AB=0.875;ABP=22.5536;AC=3;AF=0.25;AN=12;AO=33;CIGAR=3X3M;DP=268;DPB=268;DPRA=0.665217;EPP=74.6689;EPPR=504.62;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=6.93889e-18;PAIRED=0.181818;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1308;QR=9163;RO=231;RPL=0;RPP=74.6689;RPPR=504.62;RPR=33;RUN=1;SAF=33;SAP=74.6689;SAR=0;SRF=231;SRP=504.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:75:73,0,0:73:2901:0,0:0,0:0,-21.9752,-260.87,-21.9752,-260.87,-260.87 0|0:52:50,0,2:50:1997:0,2:0,78:0,-15.0515,-179.543,-8.25026,-173.131,-172.529 0|0:72:68,0,4:68:2691:0,4:0,151:0,-20.47,-241.952,-7.72103,-229.581,-228.377 0|0:40:40,0,0:40:1574:0,0:0,0:0,-12.0412,-141.91,-12.0412,-141.91,-141.91 0|1:16:0,2,14:0:0:2,14:78,558:-52.7585,-46.348,-45.7459,-6.80124,0,-2.58682 1|1:13:0,0,13:0:0:0,13:0,521:-47.2375,-47.2375,-47.2375,-3.91339,-3.91339,0 dDocent_Contig_13974 35 . T C 915.819 . AB=0.857143;ABP=41.7866;AC=2;AF=0.166667;AN=12;AO=30;CIGAR=1X;DP=150;DPB=150;DPRA=0.608696;EPP=68.1545;EPPR=261.416;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1163;QR=4609;RO=119;RPL=0;RPP=68.1545;RPPR=261.416;RPR=30;RUN=1;SAF=30;SAP=68.1545;SAR=0;SRF=119;SRP=261.416;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:17:17,0:17:639:0:0:0,-5.11751,-57.8396 0/0:39:39,0:39:1510:0:0:0,-11.7402,-136.162 0/0:38:37,0:37:1436:0:0:0,-11.1381,-129.41 0/0:21:21,0:21:825:0:0:0,-6.32163,-74.5672 0/1:24:3,21:3:119:21:821:-66.9834,0,-3.87029 0/1:11:2,9:2:80:9:342:-27.819,0,-4.28024 dDocent_Contig_13977 14 . G A 56.817 . AB=0.208333;ABP=20.744;AC=2;AF=0.166667;AN=12;AO=5;CIGAR=1X;DP=96;DPB=96;DPRA=0.666667;EPP=13.8677;EPPR=200.614;GTI=0;LEN=1;MEANALT=1;MQM=36.2;MQMR=58.3077;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.714286;PAO=0;PQA=0;PQR=0;PRO=0;QA=203;QR=3599;RO=91;RPL=0;RPP=13.8677;RPPR=200.614;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=91;SRP=200.614;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:1044:0:0:0,-7.82678,-93.7359 0/1:22:18,4:18:698:4:162:-5.60957,0,-56.5134 0/0:33:33,0:33:1315:0:0:0,-9.93399,-118.515 0/0:11:11,0:11:436:0:0:0,-3.31133,-39.5925 0/1:2:1,1:1:41:1:41:-3.28551,0,-3.19693 0/0:2:2,0:2:65:0:0:0,-0.60206,-6.16974 dDocent_Contig_13978 7 . A G 2533.51 . AB=0.168006;ABP=1313.64;AC=5;AF=0.416667;AN=12;AO=254;CIGAR=1X;DP=1611;DPB=1611;DPRA=0;EPP=554.564;EPPR=2930.16;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=59.9985;NS=6;NUMALT=1;ODDS=0;PAIRED=0.988189;PAIREDR=0.99184;PAO=0;PQA=0;PQR=0;PRO=0;QA=8192;QR=51378;RO=1348;RPL=0;RPP=554.564;RPPR=2930.16;RPR=254;RUN=1;SAF=254;SAP=554.564;SAR=0;SRF=1348;SRP=2930.16;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:220:183,36:183:6970:36:1175:-39.9822,0,-561.154 0/1:321:270,51:270:10314:51:1594:-47.0758,0,-831.277 0/1:281:230,49:230:8794:49:1530:-53.8412,0,-707.112 0/1:301:242,56:242:9224:56:1882:-79.6868,0,-739.954 0/0:242:217,24:217:8256:24:730:0,-6.95973,-676.868 0/1:246:206,38:206:7820:38:1281:-41.987,0,-630.065 dDocent_Contig_13980 163 . A G 2638.01 . AB=0.286104;ABP=148.854;AC=1;AF=0.0833333;AN=12;AO=105;CIGAR=1X;DP=888;DPB=888;DPRA=3.52207;EPP=231.015;EPPR=1694.6;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.989783;PAO=0;PQA=0;PQR=0;PRO=0;QA=4176;QR=30755;RO=783;RPL=105;RPP=231.015;RPPR=1694.6;RPR=0;RUN=1;SAF=0;SAP=231.015;SAR=105;SRF=0;SRP=1703.27;SRR=783;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:57:57,0:57:2256:0:0:0,-17.1587,-203.21 0/0:26:26,0:26:1016:0:0:0,-7.82678,-91.7267 0/0:3:3,0:3:109:0:0:0,-0.90309,-10.164 0/0:47:47,0:47:1842:0:0:0,-14.1484,-165.995 0/0:388:388,0:388:15228:0:0:0,-116.8,-1369.43 0/1:367:262,105:262:10304:105:4176:-265.324,0,-816.259 dDocent_Contig_13981 87 . A T 1179.18 . AB=0.283654;ABP=87.5724;AC=3;AF=0.3;AN=10;AO=59;CIGAR=1X;DP=297;DPB=297;DPRA=1.55805;EPP=131.127;EPPR=519.821;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2054;QR=8234;RO=238;RPL=59;RPP=131.127;RPPR=519.821;RPR=0;RUN=1;SAF=59;SAP=131.127;SAR=0;SRF=238;SRP=519.821;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:74:74,0:74:2562:0:0:0,-22.2762,-230.841 0/1:41:31,10:31:1074:10:349:-19.4046,0,-84.6285 0/1:25:10,15:10:346:15:519:-39.5125,0,-23.9487 0/1:142:108,34:108:3731:34:1186:-64.3015,0,-293.266 ./.:.:.:.:.:.:.:. 0/0:15:15,0:15:521:0:0:0,-4.51545,-47.2197 dDocent_Contig_13982 209 . N G 112.807 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=121;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:121:-11.2802,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13983 23 . A G 134.554 . AB=0.127907;ABP=106.433;AC=2;AF=0.166667;AN=12;AO=24;CIGAR=1X;DP=297;DPB=297;DPRA=0;EPP=55.1256;EPPR=595.822;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.25;PAIREDR=0.428571;PAO=0;PQA=0;PQR=0;PRO=0;QA=952;QR=10684;RO=273;RPL=0;RPP=55.1256;RPPR=595.822;RPR=24;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=273;SRP=595.822;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:31,7:31:1219:7:286:-14.6757,0,-98.5456 0/0:71:65,6:65:2574:6:227:0,-0.582405,-211.014 0/1:48:44,4:44:1714:4:158:-0.150457,0,-140.029 0/0:48:46,2:46:1823:2:82:0,-6.66976,-156.507 0/0:54:52,2:52:2008:2:79:0,-8.75837,-173.426 0/0:38:35,3:35:1346:3:120:0,-0.25183,-110.223 dDocent_Contig_13984 106 . N T 269.023 . AB=0;ABP=0;AC=6;AF=1;AN=6;AO=10;CIGAR=2X;DP=10;DPB=10;DPRA=0;EPP=24.725;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=3;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=284;QR=0;RO=0;RPL=0;RPP=24.725;RPPR=0;RPR=10;RUN=1;SAF=0;SAP=24.725;SAR=10;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 1|1:1:0,1:0:0:1:31:-3.09945,-0.30103,0 1|1:5:0,5:0:0:5:149:-13.7057,-1.50515,0 1|1:4:0,4:0:0:4:104:-9.61915,-1.20412,0 dDocent_Contig_13985 17 . G A 207.293 . AB=0.0487805;ABP=293.034;AC=0;AF=0;AN=12;AO=9;CIGAR=1X1M1X;DP=295;DPB=295;DPRA=3.28205;EPP=22.5536;EPPR=565.422;GTI=0;LEN=1;MEANALT=2.5;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=358;QR=10136;RO=259;RPL=0;RPP=22.5536;RPPR=565.422;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=259;SRP=565.422;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:27:21,2,0,4:21:819:2,0,4:80,0,155:-6.4023,-6.12962,-72.8438,-12.7239,-73.4459,-80.0368,0,-60.714,-67.3051,-66.1009 0|0:68:56,4,1,7:56:2206:4,1,7:159,41,283:-6.47679,-10.2462,-190.507,-19.9497,-188.326,-201.116,0,-168.378,-178.084,-179.361 0|0:69:56,2,9,2:56:2152:2,9,2:80,363,77:-13.0721,-23.3398,-199.356,0,-170.033,-173.915,-23.6104,-193.636,-170.302,-199.625 0|0:92:87,1,0,4:87:3443:1,0,4:39,0,162:0,-22.9867,-306.036,-26.1896,-306.337,-309.542,-12.8196,-292.978,-296.184,-294.98 0|0:18:18,0,0,0:18:709:0,0,0:0,0,0:0,-5.41854,-64.1392,-5.41854,-64.1392,-64.1392,-5.41854,-64.1392,-64.1392,-64.1392 0|0:21:21,0,0,0:21:807:0,0,0:0,0,0:0,-6.32163,-72.9409,-6.32163,-72.9409,-72.9409,-6.32163,-72.9409,-72.9409,-72.9409 dDocent_Contig_13986 31 . C T 160.754 . AB=0.191489;ABP=41.8658;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=101;DPB=101;DPRA=1.74074;EPP=22.5536;EPPR=202.786;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.891304;PAO=0;PQA=0;PQR=0;PRO=0;QA=363;QR=3655;RO=92;RPL=0;RPP=22.5536;RPPR=202.786;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=92;SRP=202.786;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:15:15,0:15:590:0:0:0,-4.51545,-53.4351 0/0:25:25,0:25:990:0:0:0,-7.52575,-89.3927 0/0:3:3,0:3:120:0:0:0,-0.90309,-11.1873 0/0:11:11,0:11:430:0:0:0,-3.31133,-39.0489 0/1:15:13,2:13:526:2:82:-3.26423,0,-43.1698 0/1:32:25,7:25:999:7:281:-16.029,0,-80.5693 dDocent_Contig_13987 66 . A T 702.867 . AB=0.425532;ABP=5.27418;AC=3;AF=0.3;AN=10;AO=24;CIGAR=1X;DP=199;DPB=199;DPRA=0.516892;EPP=55.1256;EPPR=383.018;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=945;QR=6881;RO=175;RPL=24;RPP=55.1256;RPPR=383.018;RPR=0;RUN=1;SAF=24;SAP=55.1256;SAR=0;SRF=175;SRP=383.018;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:47:27,20:27:1047:20:793:-57.5392,0,-80.3768 0/0:65:65,0:65:2567:0:0:0,-19.5669,-231.178 0/0:55:55,0:55:2176:0:0:0,-16.5566,-196.026 0/0:28:28,0:28:1091:0:0:0,-8.42884,-98.4788 ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:152:-14.0485,-1.20412,0 dDocent_Contig_13988 50 . T G 37.0901 . AB=0.102041;ABP=137.819;AC=1;AF=0.0833333;AN=12;AO=14;CIGAR=1X;DP=556;DPB=556;DPRA=0.903394;EPP=33.4109;EPPR=1051.1;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.953789;PAO=0;PQA=0;PQR=0;PRO=0;QA=535;QR=20009;RO=541;RPL=14;RPP=33.4109;RPPR=1051.1;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=541;SRP=1177.78;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:86:86,0:86:3123:0:0:0,-25.8886,-281.245 0/0:101:100,0:100:3728:0:0:0,-30.103,-335.257 0/0:117:117,0:117:4432:0:0:0,-35.2205,-398.941 0/0:79:79,0:79:2929:0:0:0,-23.7814,-263.781 0/1:98:88,10:88:3230:10:382:-5.2318,0,-261.364 0/0:75:71,4:71:2567:4:153:0,-8.43581,-217.092 dDocent_Contig_13989 7 . A T 71.7519 . AB=0;ABP=0;AC=2;AF=0.2;AN=10;AO=2;CIGAR=2X2M2D2X1M1X3M1X;DP=96;DPB=95.7143;DPRA=0.0851064;EPP=7.35324;EPPR=204.957;GTI=0;LEN=1;MEANALT=1;MQM=38;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=79;QR=3623;RO=93;RPL=0;RPP=7.35324;RPPR=204.957;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=93;SRP=204.957;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:7:7,0:7:278:0:0:0,-2.10721,-25.3911 0|0:46:45,0:45:1765:0:0:0,-13.5463,-158.679 0|0:9:9,0:9:344:0:0:0,-2.70927,-31.3156 0|0:32:32,0:32:1236:0:0:0,-9.63296,-111.528 .:.:.:.:.:.:.:. 1|1:2:0,2:0:0:2:79:-6.77703,-0.60206,0 dDocent_Contig_13990 65 . G A 168.966 . AB=0.176471;ABP=49.3776;AC=6;AF=0.5;AN=12;AO=15;CIGAR=1X;DP=108;DPB=108;DPRA=0;EPP=35.5824;EPPR=204.957;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.956989;PAO=0;PQA=0;PQR=0;PRO=0;QA=561;QR=3680;RO=93;RPL=15;RPP=35.5824;RPPR=204.957;RPR=0;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=93;SRP=204.957;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:16:12,4:12:478:4:151:-9.14048,0,-38.5548 0/1:9:8,1:8:305:1:36:-0.889005,0,-25.0948 0/0:55:51,4:51:2022:4:155:0,-2.23229,-167.842 0/1:24:21,3:21:835:3:110:-3.03618,0,-68.2413 0/1:2:1,1:1:40:1:34:-2.79685,0,-3.39362 1/1:2:0,2:0:0:2:75:-7.1188,-0.60206,0 dDocent_Contig_13991 122 . C T 41.5208 . AB=0.214286;ABP=12.937;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=82;DPB=82;DPRA=1.02941;EPP=9.52472;EPPR=174.557;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.987342;PAO=0;PQA=0;PQR=0;PRO=0;QA=106;QR=2644;RO=79;RPL=0;RPP=9.52472;RPPR=174.557;RPR=3;RUN=1;SAF=0;SAP=9.52472;SAR=3;SRF=0;SRP=174.557;SRR=79;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:610:0:0:0,-5.41854,-55.2198 0/0:20:20,0:20:660:0:0:0,-6.0206,-59.7097 0/0:15:15,0:15:505:0:0:0,-4.51545,-45.7697 0/1:14:11,3:11:374:3:106:-5.67474,0,-29.7741 0/0:2:2,0:2:62:0:0:0,-0.60206,-5.88849 0/0:13:13,0:13:433:0:0:0,-3.91339,-39.2894 dDocent_Contig_13992 98 . N A 57.9484 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=61;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:61:-5.79376,-0.60206,0 ./.:.:.:.:.:.:.:. dDocent_Contig_13993 98 . N A 62.6944 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=66;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:66:-6.26836,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_13994 40 . C T 3256.18 . AB=0.495614;ABP=3.0484;AC=6;AF=0.5;AN=12;AO=113;CIGAR=1X;DP=228;DPB=228;DPRA=0;EPP=248.387;EPPR=250.558;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.300885;PAIREDR=0.298246;PAO=0;PQA=0;PQR=0;PRO=0;QA=4485;QR=4553;RO=114;RPL=0;RPP=248.387;RPPR=250.558;RPR=113;RUN=1;SAF=113;SAP=248.387;SAR=0;SRF=114;SRP=250.558;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:54:16,38:16:649:38:1507:-119.617,0,-42.4875 0/1:39:17,22:17:686:22:876:-67.4069,0,-50.3298 0/1:27:9,18:9:356:18:716:-56.6373,0,-24.2721 0/1:46:27,19:27:1077:19:739:-52.9814,0,-83.3649 0/1:34:27,7:27:1097:7:284:-15.699,0,-88.7774 0/1:28:18,9:18:688:9:363:-24.4977,0,-53.6944 dDocent_Contig_13995 7 . A G 615.19 . AB=0.295775;ABP=28.7315;AC=6;AF=0.5;AN=12;AO=21;CIGAR=2X2M;DP=109;DPB=109;DPRA=1.97222;EPP=48.6112;EPPR=150.67;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.809524;PAIREDR=0.852941;PAO=0;PQA=0;PQR=0;PRO=0;QA=593;QR=2611;RO=68;RPL=0;RPP=48.6112;RPPR=150.67;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=68;SRP=150.67;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:18:18,0,0:18:694:0,0:0,0:0,-5.41854,-62.794,-5.41854,-62.794,-62.794 0|1:21:15,2,4:15:576:2,4:74,116:-4.66345,-3.09866,-49.854,0,-41.2437,-46.0915 0|1:25:13,0,12:13:500:0,12:0,360:-25.1597,-29.0731,-70.1664,0,-41.4337,-37.8213 0|1:25:16,4,5:16:610:4,5:119,117:-4.71373,0,-48.9495,-0.541202,-41.1644,-49.1445 0|1:14:6,7,0:6:231:7,0:212,0:-15.2166,0,-16.984,-17.0228,-19.0912,-36.0285 1|1:6:0,6,0:0:0:6,0:207,0:-18.9666,-1.80618,0,-18.9666,-1.80618,-18.9666 dDocent_Contig_13996 26 . A G 58.1204 . AB=0.117647;ABP=46.1843;AC=4;AF=0.4;AN=10;AO=6;CIGAR=1X;DP=97;DPB=97;DPRA=2.44444;EPP=16.0391;EPPR=200.614;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=3.46945e-18;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=240;QR=3593;RO=91;RPL=0;RPP=16.0391;RPPR=200.614;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=91;SRP=200.614;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:7:6,1:6:241:1:39:-1.78935,0,-19.9586 0/1:27:24,3:24:967:3:120:-3.05988,0,-79.2027 0/0:9:9,0:9:355:0:0:0,-2.70927,-32.3078 0/0:53:52,1:52:2030:1:41:0,-11.86,-178.79 1/1:1:0,1:0:0:1:40:-3.99568,-0.30103,0 ./.:.:.:.:.:.:.:. dDocent_Contig_13997 10 . T A 508.192 . AB=0.372549;ABP=10.206;AC=2;AF=0.166667;AN=12;AO=23;CIGAR=1X;DP=170;DPB=170;DPRA=0.830303;EPP=52.9542;EPPR=264.311;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.695652;PAIREDR=0.816327;PAO=0;PQA=0;PQR=0;PRO=0;QA=920;QR=5843;RO=147;RPL=0;RPP=52.9542;RPPR=322.217;RPR=23;RUN=1;SAF=23;SAP=52.9542;SAR=0;SRF=140;SRP=264.311;SRR=7;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:24,1:24:952:1:41:0,-3.43118,-81.8876 0/0:31:30,1:30:1187:1:39:0,-5.43537,-103.209 0/1:28:16,12:16:654:12:483:-35.3928,0,-50.7631 0/0:33:33,0:33:1325:0:0:0,-9.93399,-119.511 0/1:23:16,7:16:633:7:280:-18.6482,0,-50.3779 0/0:30:28,2:28:1092:2:77:0,-1.72207,-91.2598 dDocent_Contig_13998 14 . T G 1349.54 . AB=0.300578;ABP=62.7697;AC=5;AF=0.416667;AN=12;AO=52;CIGAR=1X5M;DP=173;DPB=187.667;DPRA=0;EPP=115.927;EPPR=211.472;GTI=0;LEN=1;MEANALT=1.83333;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.826923;PAIREDR=0.697917;PAO=0;PQA=0;PQR=0;PRO=0;QA=2075;QR=3792;RO=96;RPL=0;RPP=115.927;RPPR=211.472;RPR=52;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=96;SRP=211.472;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:36:18,0,6,12:18:702:0,6,12:0,239,469:-33.1309,-38.5495,-96.2451,-18.8661,-76.5628,-74.7566,0,-57.691,-38.008,-54.0787 0|1:37:12,3,6,16:12:471:3,6,16:120,237,638:-48.9277,-42.6551,-80.4846,-33.0391,-61.8861,-69.9649,0,-28.8465,-19.23,-33.9156 0|0:30:19,0,6,5:19:754:0,6,5:0,241,200:-14.1403,-19.8598,-81.9261,0,-62.0664,-60.2602,-3.38624,-65.4515,-45.5914,-63.9463 0|1:23:14,0,4,5:14:553:0,4,5:0,161,202:-12.4392,-16.6537,-62.1529,-3.38557,-48.8832,-47.6791,0,-45.4985,-32.2281,-43.9933 0|1:23:12,0,0,11:12:479:0,0,11:0,0,445:-33.4818,-37.0942,-76.5421,-37.0942,-76.5421,-76.5421,0,-39.8494,-39.8494,-36.5381 0|1:24:21,0,0,3:21:833:0,0,3:0,0,121:-4.05548,-10.3771,-78.941,-10.3771,-78.941,-78.941,0,-68.9659,-68.9659,-68.0628 dDocent_Contig_13999 69 . G A 282.054 . AB=0;ABP=0;AC=2;AF=0.2;AN=10;AO=8;CIGAR=1X;DP=125;DPB=125;DPRA=0.273504;EPP=20.3821;EPPR=257.073;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=305;QR=4567;RO=117;RPL=8;RPP=20.3821;RPPR=257.073;RPR=0;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=117;SRP=257.073;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:812:0:0:0,-6.32163,-73.3906 0/0:41:41,0:41:1622:0:0:0,-12.3422,-146.217 0/0:14:14,0:14:532:0:0:0,-4.21442,-48.2023 0/0:41:41,0:41:1601:0:0:0,-12.3422,-144.33 1/1:8:0,8:0:0:8:305:-27.8075,-2.40824,0 ./.:.:.:.:.:.:.:. dDocent_Contig_14000 51 . A T 72.3587 . AB=0.145833;ABP=55.3066;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=283;DPB=283;DPRA=1.02674;EPP=24.725;EPPR=595.822;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.4;PAIREDR=0.695971;PAO=0;PQA=0;PQR=0;PRO=0;QA=377;QR=10155;RO=273;RPL=5;RPP=3.0103;RPPR=10.6542;RPR=5;RUN=1;SAF=5;SAP=3.0103;SAR=5;SRF=121;SRP=10.6542;SRR=152;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:37,0:37:1395:0:0:0,-11.1381,-125.827 0/0:48:48,0:48:1766:0:0:0,-14.4494,-159.186 0/0:48:45,3:45:1704:3:123:0,-2.98465,-142.148 0/1:48:41,7:41:1504:7:254:-8.75875,0,-121.172 0/0:31:31,0:31:1158:0:0:0,-9.33193,-104.516 0/0:71:71,0:71:2628:0:0:0,-21.3731,-236.718 dDocent_Contig_14001 13 . C T 150.13 . AB=0.11588;ABP=301.62;AC=3;AF=0.25;AN=12;AO=27;CIGAR=1X;DP=464;DPB=464;DPRA=1.00866;EPP=61.6401;EPPR=951.944;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.993135;PAO=0;PQA=0;PQR=0;PRO=0;QA=992;QR=17425;RO=437;RPL=0;RPP=61.6401;RPPR=951.944;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=437;SRP=951.944;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:87:78,9:78:3107:9:338:-4.58512,0,-253.518 0/1:73:62,11:62:2493:11:390:-13.4565,0,-202.53 0/1:73:66,7:66:2599:7:264:-2.14395,0,-212.07 0/0:66:66,0:66:2623:0:0:0,-19.868,-236.193 0/0:102:102,0:102:4087:0:0:0,-30.7051,-367.806 0/0:63:63,0:63:2516:0:0:0,-18.9649,-226.57 dDocent_Contig_14002 19 . A G 1310.31 . AB=0.484375;ABP=3.14602;AC=6;AF=0.5;AN=12;AO=43;CIGAR=1X;DP=90;DPB=90;DPRA=1.08571;EPP=96.3836;EPPR=105.07;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.906977;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1729;QR=1847;RO=47;RPL=0;RPP=96.3836;RPPR=105.07;RPR=43;RUN=1;SAF=43;SAP=96.3836;SAR=0;SRF=47;SRP=105.07;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:7:6,1:6:245:1:41:-1.98736,0,-20.3223 0/1:16:8,8:8:318:8:326:-24.8934,0,-24.1696 0/1:24:11,13:11:415:13:511:-39.1059,0,-30.4659 1/1:12:0,12:0:0:12:488:-44.2715,-3.61236,0 0/1:17:8,9:8:318:9:363:-27.9169,0,-23.8693 0/0:14:14,0:14:551:0:0:0,-4.21442,-49.9302 dDocent_Contig_14003 67 . C A 2896.32 . AB=0.413793;ABP=19.8579;AC=6;AF=0.5;AN=12;AO=108;CIGAR=1X2M1X;DP=261;DPB=261;DPRA=0;EPP=237.529;EPPR=324.388;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.722222;PAIREDR=0.5;PAO=0;PQA=0;PQR=0;PRO=0;QA=4189;QR=5828;RO=148;RPL=108;RPP=237.529;RPPR=324.388;RPR=0;RUN=1;SAF=108;SAP=237.529;SAR=0;SRF=148;SRP=324.388;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:32:20,11,0:20:793:11,0:427,0:-29.2823,0,-62.1995,-35.3029,-65.5108,-100.597 0|1:45:29,16,0:29:1133:16,0:609,0:-41.5995,0,-88.7127,-50.3293,-93.5292,-143.475 0|1:37:23,12,2:23:920:12,2:476,76:-32.2739,0,-72.1918,-32.9675,-69.5732,-108.153 0|1:46:37,9,0:37:1442:9,0:357,0:-18.6457,0,-116.197,-29.7838,-118.906,-148.295 0|1:58:27,30,0:27:1058:30,0:1163,0:-87.6794,0,-78.2374,-95.8072,-87.2683,-182.81 0|1:43:12,30,0:12:482:30,0:1157,0:-91.3735,0,-30.689,-94.9858,-39.7199,-134.709 dDocent_Contig_14005 127 . G T 213.656 . AB=0.2;ABP=49.9141;AC=4;AF=0.333333;AN=12;AO=12;CIGAR=1X;DP=96;DPB=96;DPRA=0.833333;EPP=29.068;EPPR=185.414;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.833333;PAIREDR=0.690476;PAO=0;PQA=0;PQR=0;PRO=0;QA=479;QR=3316;RO=84;RPL=12;RPP=29.068;RPPR=185.414;RPR=0;RUN=1;SAF=0;SAP=29.068;SAR=12;SRF=0;SRP=185.414;SRR=84;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:12:8,4:8:322:4:161:-11.2629,0,-25.7364 0/0:21:21,0:21:852:0:0:0,-6.32163,-76.9913 0/1:24:22,2:22:875:2:80:-0.367071,0,-71.8309 0/1:16:11,5:11:395:5:197:-13.2892,0,-31.0562 0/1:8:7,1:7:274:1:41:-1.68633,0,-22.6188 0/0:15:15,0:15:598:0:0:0,-4.51545,-54.1603 dDocent_Contig_14008 7 . A T 4309.51 . AB=0.421603;ABP=18.3317;AC=7;AF=0.583333;AN=12;AO=156;CIGAR=2X;DP=325;DPB=325;DPRA=0;EPP=341.76;EPPR=367.818;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.724359;PAIREDR=0.946429;PAO=0;PQA=0;PQR=0;PRO=0;QA=5948;QR=6350;RO=168;RPL=0;RPP=341.76;RPPR=367.818;RPR=156;RUN=1;SAF=156;SAP=341.76;SAR=0;SRF=168;SRP=367.818;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:103:74,29:74:2798:29:1090:-67.3998,0,-221.006 0|1:26:9,17:9:339:17:651:-51.0994,0,-23.0381 0|1:97:56,41:56:2123:41:1560:-111.469,0,-162.105 0|1:42:21,20:21:784:20:767:-56.7225,0,-58.2484 1|1:38:3,35:3:114:35:1338:-110.076,-0.806922,0 0|1:19:5,14:5:192:14:542:-43.4065,0,-11.9304 dDocent_Contig_14010 111 . T A 908.659 . AB=0.35;ABP=26.4622;AC=2;AF=0.166667;AN=12;AO=42;CIGAR=1X;DP=292;DPB=292;DPRA=1.39535;EPP=94.2121;EPPR=545.878;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1431;QR=8311;RO=250;RPL=0;RPP=94.2121;RPPR=545.878;RPR=42;RUN=1;SAF=0;SAP=94.2121;SAR=42;SRF=0;SRP=545.878;SRR=250;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:82:44,38:44:1496:38:1294:-92.0756,0,-110.246 0/0:45:45,0:45:1481:0:0:0,-13.5463,-133.575 0/1:38:34,4:34:1112:4:137:-1.22892,0,-88.9357 0/0:65:65,0:65:2184:0:0:0,-19.5669,-196.826 0/0:32:32,0:32:1067:0:0:0,-9.63296,-96.3305 0/0:30:30,0:30:971:0:0:0,-9.0309,-87.6848 dDocent_Contig_14011 31 . G A 275.188 . AB=0.692308;ABP=7.18621;AC=1;AF=0.1;AN=10;AO=10;CIGAR=1X;DP=351;DPB=351;DPRA=0.284746;EPP=24.725;EPPR=743.482;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=399;QR=13516;RO=341;RPL=0;RPP=24.725;RPPR=743.482;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=341;SRP=743.482;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:104:104,0:104:4069:0:0:0,-31.3071,-366.196 0/0:89:89,0:89:3517:0:0:0,-26.7917,-316.568 0/0:43:42,1:42:1699:1:36:0,-9.34601,-149.529 0/0:102:102,0:102:4069:0:0:0,-30.7051,-366.181 ./.:.:.:.:.:.:.:. 0/1:13:4,9:4:162:9:363:-29.1209,0,-11.0534 dDocent_Contig_14012 33 . G T 42.1673 . AB=0.2;ABP=18.6449;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=159;DPB=159;DPRA=0.719424;EPP=11.6962;EPPR=330.959;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.7548;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.703226;PAO=0;PQA=0;PQR=0;PRO=0;QA=124;QR=6165;RO=155;RPL=0;RPP=11.6962;RPPR=339.589;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=154;SRP=330.959;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:20:16,4:16:628:4:124:-5.43855,0,-50.8278 0/0:17:17,0:17:660:0:0:0,-5.11751,-59.7272 0/0:9:9,0:9:367:0:0:0,-2.70927,-33.3953 0/0:28:28,0:28:1128:0:0:0,-8.42884,-101.406 0/0:44:44,0:44:1772:0:0:0,-13.2453,-159.693 0/0:41:41,0:41:1610:0:0:0,-12.3422,-145.132 dDocent_Contig_14013 66 . G A 183.452 . AB=0.3;ABP=13.4334;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=178;DPB=178;DPRA=1.01351;EPP=22.5536;EPPR=369.989;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.994083;PAO=0;PQA=0;PQR=0;PRO=0;QA=314;QR=5746;RO=169;RPL=9;RPP=22.5536;RPPR=369.989;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=169;SRP=369.989;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:30:21,9:21:701:9:314:-19.567,0,-54.3695 0/0:66:66,0:66:2280:0:0:0,-19.868,-205.469 0/0:11:11,0:11:380:0:0:0,-3.31133,-34.5326 0/0:27:27,0:27:898:0:0:0,-8.12781,-81.1241 0/0:22:22,0:22:736:0:0:0,-6.62266,-66.5516 0/0:22:22,0:22:751:0:0:0,-6.62266,-67.9074 dDocent_Contig_14014 141 . T A 11478 . AB=0;ABP=0;AC=6;AF=0.5;AN=12;AO=329;CIGAR=1X;DP=458;DPB=458;DPRA=2.7541;EPP=717.425;EPPR=278.787;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13037;QR=5014;RO=127;RPL=0;RPP=717.425;RPPR=278.787;RPR=329;RUN=1;SAF=0;SAP=717.425;SAR=329;SRF=0;SRP=278.787;SRR=127;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:65:64,0:64:2526:0:0:0,-19.2659,-227.312 0/0:18:18,0:18:683:0:0:0,-5.41854,-61.785 1/1:13:1,12:1:38:12:488:-40.4738,-0.116121,0 0/0:39:38,0:38:1523:0:0:0,-11.4391,-137.143 1/1:139:0,139:0:0:139:5562:-500.39,-41.8432,0 1/1:184:6,178:6:244:178:6987:-606.155,-33.0507,0 dDocent_Contig_14015 26 . T C 266.643 . AB=0.116981;ABP=340.687;AC=4;AF=0.333333;AN=12;AO=39;CIGAR=1X;DP=592;DPB=592;DPRA=0;EPP=87.6977;EPPR=1195.16;GTI=0;LEN=1;MEANALT=1;MQM=59.3846;MQMR=59.7179;NS=6;NUMALT=1;ODDS=0;PAIRED=0.923077;PAIREDR=0.965642;PAO=0;PQA=0;PQR=0;PRO=0;QA=1536;QR=19254;RO=553;RPL=0;RPP=87.6977;RPPR=1203.83;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=552;SRP=1195.16;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:149:142,7:142:4942:7:248:0,-22.2031,-422.239 0/1:153:140,13:140:4825:13:527:-1.71917,0,-388.3 0/1:84:70,14:70:2487:14:559:-25.3647,0,-198.777 0/0:178:177,1:177:6143:1:41:0,-49.4888,-541.629 0/1:7:6,1:6:217:1:41:-1.98736,0,-17.774 0/1:21:18,3:18:640:3:120:-4.42463,0,-51.5964 dDocent_Contig_14016 7 . A G 2485.19 . AB=0.563218;ABP=9.05049;AC=7;AF=0.583333;AN=12;AO=106;CIGAR=1X;DP=182;DPB=182;DPRA=0;EPP=233.186;EPPR=161.528;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3421;QR=2773;RO=73;RPL=0;RPP=233.186;RPPR=161.528;RPR=106;RUN=1;SAF=106;SAP=233.186;SAR=0;SRF=73;SRP=161.528;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:9,16:9:337:16:496:-37.4059,0,-23.1547 0/1:46:11,34:11:427:34:1086:-84.3508,0,-25.1056 0/1:29:20,9:20:766:9:254:-14.4019,0,-60.5382 0/1:48:20,27:20:742:27:928:-69.4703,0,-52.757 1/1:8:0,8:0:0:8:282:-25.7153,-2.40824,0 0/1:26:13,12:13:501:12:375:-26.3964,0,-37.783 dDocent_Contig_14019 17 . A G 75.9745 . AB=0.145833;ABP=55.3066;AC=1;AF=0.0833333;AN=12;AO=8;CIGAR=1X;DP=239;DPB=239;DPRA=0.950617;EPP=20.3821;EPPR=504.62;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.922078;PAO=0;PQA=0;PQR=0;PRO=0;QA=299;QR=9268;RO=231;RPL=0;RPP=20.3821;RPPR=504.62;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=231;SRP=504.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:33:33,0:33:1319:0:0:0,-9.93399,-118.969 0/0:29:28,1:28:1111:1:41:0,-4.6353,-96.1816 0/0:63:63,0:63:2538:0:0:0,-18.9649,-228.546 0/1:48:41,7:41:1631:7:258:-9.12033,0,-132.57 0/0:34:34,0:34:1365:0:0:0,-10.235,-123.107 0/0:32:32,0:32:1304:0:0:0,-9.63296,-117.618 dDocent_Contig_14021 59 . A T 2550.39 . AB=0.0882353;ABP=153.225;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X8M;DP=229;DPB=253.222;DPRA=0.829268;EPP=22.5536;EPPR=204.957;GTI=0;LEN=1;MEANALT=2.33333;MQM=60;MQMR=60;NS=6;NUMALT=5;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=355;QR=3258;RO=93;RPL=9;RPP=22.5536;RPPR=204.957;RPR=0;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=93;SRP=204.957;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:16:9,0,0,5,0,2:9:320:0,0,5,0,2:0,0,152,0,79:-9.39784,-12.1071,-38.1982,-12.1071,-38.1982,-38.1982,0,-26.0446,-26.0446,-24.5395,-12.1071,-38.1982,-38.1982,-26.0446,-38.1982,-5.58024,-31.6901,-31.6901,-19.5366,-31.6901,-31.088 0|0:26:21,1,0,4,0,0:21:721:1,0,4,0,0:38,0,117,0,0:-2.93217,-6.11983,-64.4031,-9.2538,-64.7041,-67.8224,0,-55.3886,-58.5068,-57.3027,-9.2538,-64.7041,-67.8224,-58.5068,-67.8224,-9.2538,-64.7041,-67.8224,-58.5068,-67.8224,-67.8224 0|0:58:42,0,0,10,0,4:42:1475:0,0,10,0,4:0,0,318,0,160:-12.9189,-25.5621,-145.614,-25.5621,-145.614,-145.614,0,-120.019,-120.019,-117.009,-25.5621,-145.614,-145.614,-120.019,-145.614,-12.3631,-132.431,-132.431,-106.835,-132.431,-131.227 0|1:28:21,0,0,0,4,3:21:742:0,0,0,4,3:0,0,0,89,116:-3.27657,-9.5982,-70.0718,-9.5982,-70.0718,-70.0718,-9.5982,-70.0718,-70.0718,-70.0718,-2.88659,-63.2859,-63.2859,-63.2859,-62.0817,0,-60.5381,-60.5381,-60.5381,-53.7537,-59.635 0|0:41:0,0,2,38,0,0:0:0:0,2,38,0,0:0,54,1166,0,0:-105.006,-105.006,-105.006,-100.75,-100.75,-100.148,-11.4391,-11.4391,-7.04828,0,-105.006,-105.006,-100.75,-11.4391,-105.006,-105.006,-105.006,-100.75,-11.4391,-105.006,-105.006 0|0:60:0,3,34,18,1,0:0:0:3,34,18,1,0:111,1069,558,33,0:-130.717,-121.634,-120.731,-44.7708,-35.6832,-34.5358,-85.9333,-76.8485,0,-80.5147,-128.049,-118.965,-42.1021,-83.2648,-127.748,-130.717,-121.634,-44.7708,-85.9333,-128.049,-130.717 dDocent_Contig_14022 120 . A G 799.188 . AB=0.292929;ABP=39.8815;AC=6;AF=0.6;AN=10;AO=37;CIGAR=1X;DP=107;DPB=107;DPRA=0;EPP=83.3548;EPPR=155.013;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1276;QR=2483;RO=70;RPL=0;RPP=83.3548;RPPR=155.013;RPR=37;RUN=1;SAF=0;SAP=83.3548;SAR=37;SRF=0;SRP=155.013;SRR=70;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:36:23,13:23:821:13:453:-30.2657,0,-63.3762 0/1:17:15,2:15:531:2:70:-1.52989,0,-43.0047 0/1:28:21,7:21:742:7:242:-13.6887,0,-58.675 0/1:18:11,7:11:389:7:243:-16.7903,0,-29.9293 ./.:.:.:.:.:.:.:. 1/1:8:0,8:0:0:8:268:-24.4466,-2.40824,0 dDocent_Contig_14023 30 . C A 2960.2 . AB=0.179487;ABP=72.6088;AC=2;AF=0.166667;AN=12;AO=14;CIGAR=12M1X8M;DP=221;DPB=234.381;DPRA=1.95;EPP=33.4109;EPPR=102.898;GTI=0;LEN=1;MEANALT=15;MQM=60;MQMR=60;NS=6;NUMALT=7;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=522;QR=1719;RO=46;RPL=0;RPP=33.4109;RPPR=102.898;RPR=14;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=46;SRP=102.898;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:20:1,0,0,0,16,0,0,0:1:38:0,0,0,16,0,0,0:0,0,0,608,0,0,0:-51.3918,-51.6928,-54.8112,-51.6928,-54.8112,-54.8112,-51.6928,-54.8112,-54.8112,-54.8112,-1.64003,-4.81648,-4.81648,-4.81648,0,-51.6928,-54.8112,-54.8112,-54.8112,-4.81648,-54.8112,-51.6928,-54.8112,-54.8112,-54.8112,-4.81648,-54.8112,-54.8112,-51.6928,-54.8112,-54.8112,-54.8112,-4.81648,-54.8112,-54.8112,-54.8112 0|0:62:19,0,0,0,29,0,3,0:19:709:0,0,0,29,0,3,0:0,0,0,1128,0,120,0:-87.0686,-92.7882,-150.846,-92.7882,-150.846,-150.846,-92.7882,-150.846,-150.846,-150.846,0,-58.1228,-58.1228,-58.1228,-49.3929,-92.7882,-150.846,-150.846,-150.846,-58.1228,-150.846,-82.8985,-140.958,-140.958,-140.958,-48.2294,-140.958,-140.055,-92.7882,-150.846,-150.846,-150.846,-58.1228,-150.846,-140.958,-150.846 0|0:23:7,0,0,0,9,1,3,0:7:259:0,0,0,9,1,3,0:0,0,0,354,41,113,0:-27.0671,-29.1743,-50.3682,-29.1743,-50.3682,-50.3682,-29.1743,-50.3682,-50.3682,-50.3682,0,-21.2262,-21.2262,-21.2262,-18.5169,-25.7862,-46.9816,-46.9816,-46.9816,-17.8361,-46.6806,-19.9081,-41.1052,-41.1052,-41.1052,-11.954,-37.7181,-40.2021,-29.1743,-50.3682,-50.3682,-50.3682,-21.2262,-46.9816,-41.1052,-50.3682 0|0:38:12,0,0,0,19,1,1,0:12:452:0,0,0,19,1,1,0:0,0,0,731,38,41,0:-56.5162,-60.1286,-97.1792,-60.1286,-97.1792,-97.1792,-60.1286,-97.1792,-97.1792,-97.1792,0,-37.1404,-37.1404,-37.1404,-31.4208,-57.0104,-94.0619,-94.0619,-94.0619,-34.0204,-93.7608,-56.7416,-93.7935,-93.7935,-93.7935,-33.7512,-90.6761,-93.4925,-60.1286,-97.1792,-97.1792,-97.1792,-37.1404,-94.0619,-93.7935,-97.1792 0|1:37:0,3,2,2,0,13,4,6:0:0:3,2,2,0,13,4,6:33,67,70,0,516,150,224:-60.8915,-58.8429,-57.9398,-55.4644,-53.4168,-54.8623,-55.1941,-53.1465,-49.7669,-54.5921,-60.8915,-58.8429,-55.4644,-55.1941,-60.8915,-18.3724,-16.329,-12.9408,-12.6701,-18.3724,-14.459,-48.5982,-46.5513,-43.1705,-42.9001,-48.5982,-6.06599,-47.394,-42.5412,-40.4953,-37.1131,-36.8427,-42.5412,0,-30.2447,-40.735 0|1:41:7,1,1,4,0,3,5,8:7:261:1,1,4,0,3,5,8:5,37,148,0,119,195,298:-22.3068,-24.2725,-45.3513,-21.3848,-42.6239,-42.4652,-12.2963,-33.5384,-30.6514,-32.4762,-24.414,-45.6523,-42.7662,-33.6803,-45.7947,-14.6088,-35.8502,-32.9635,-23.8765,-35.9923,-35.0892,-8.37162,-29.6154,-26.7282,-17.6404,-29.7572,-19.9528,-28.2521,0,-21.2474,-18.3594,-9.27042,-21.3887,-11.583,-5.34542,-18.9805 dDocent_Contig_14024 42 . C T 194.347 . AB=0.583333;ABP=3.73412;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X;DP=97;DPB=97;DPRA=1.52727;EPP=22.5536;EPPR=194.1;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=351;QR=3513;RO=88;RPL=0;RPP=22.5536;RPPR=194.1;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=88;SRP=194.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:21:21,0:21:833:0:0:0,-6.32163,-75.2833 0/0:30:28,2:28:1123:2:82:0,-1.25122,-93.5757 0/1:12:5,7:5:193:7:269:-20.9575,0,-14.1243 0/0:14:14,0:14:569:0:0:0,-4.21442,-51.5523 0/0:5:5,0:5:203:0:0:0,-1.50515,-18.6531 0/0:15:15,0:15:592:0:0:0,-4.51545,-53.6147 dDocent_Contig_14025 117 . C G 1996.76 . AB=0.425234;ABP=13.4009;AC=6;AF=0.5;AN=12;AO=91;CIGAR=1X;DP=214;DPB=214;DPRA=0;EPP=200.614;EPPR=265.758;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3037;QR=4141;RO=121;RPL=0;RPP=200.614;RPPR=265.758;RPR=91;RUN=1;SAF=0;SAP=200.614;SAR=91;SRF=0;SRP=265.758;SRR=121;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:44:27,16:27:924:16:550:-36.532,0,-70.179 0/1:22:15,6:15:502:6:208:-12.5514,0,-39.0066 0/1:55:33,22:33:1133:22:710:-47.643,0,-85.7194 0/1:33:23,10:23:783:10:340:-20.9956,0,-60.8504 0/1:29:11,18:11:383:18:606:-46.1277,0,-26.0751 0/1:31:12,19:12:416:19:623:-47.0479,0,-28.4405 dDocent_Contig_14026 8 . A G 3910.49 . AB=0.487889;ABP=3.37847;AC=6;AF=0.5;AN=12;AO=141;CIGAR=1X1M1X4M;DP=289;DPB=289;DPRA=0;EPP=309.188;EPPR=274.444;GTI=0;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0.113475;PAIREDR=0.88;PAO=0;PQA=0;PQR=0;PRO=0;QA=5359;QR=4807;RO=125;RPL=0;RPP=309.188;RPPR=274.444;RPR=141;RUN=1;SAF=141;SAP=309.188;SAR=0;SRF=125;SRP=274.444;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:45:18,0,27,0:18:673:0,27,0:0,1025,0:-79.0117,-84.4302,-139.533,0,-55.4792,-47.3513,-84.4302,-139.533,-55.4792,-139.533 0|1:89:40,1,36,11:40:1528:1,36,11:38,1374,437:-100.674,-109.599,-234.658,0,-122.234,-114.513,-76.7368,-198.981,-89.372,-198.786 0|1:45:27,0,16,0:27:1059:0,16,0:0,583,0:-39.4554,-47.5832,-134.687,0,-87.078,-82.2615,-47.5832,-134.687,-87.078,-134.687 0|1:73:22,0,46,0:22:849:0,46,0:0,1774,0:-139.117,-145.74,-215.459,0,-69.7713,-55.924,-145.74,-215.459,-69.7713,-215.459 0|1:18:11,2,5,0:11:436:2,5,0:77,191,0:-12.3581,-9.34649,-44.6429,0,-29.5778,-34.393,-15.6694,-45.2449,-35.8982,-51.5663 0|1:19:7,0,11,0:7:262:0,11,0:0,412,0:-31.6541,-33.7613,-55.2145,0,-21.4737,-18.1624,-33.7613,-55.2145,-21.4737,-55.2145 dDocent_Contig_14027 13 . T A 1226.38 . AB=0.164414;ABP=437.324;AC=4;AF=0.333333;AN=12;AO=87;CIGAR=5M1X2M1X1M1X;DP=706;DPB=699.636;DPRA=0;EPP=191.928;EPPR=1243.06;GTI=0;LEN=1;MEANALT=4;MQM=59.1724;MQMR=59.7084;NS=6;NUMALT=3;ODDS=0;PAIRED=0.781609;PAIREDR=0.773585;PAO=0;PQA=0;PQR=0;PRO=0;QA=3394;QR=22591;RO=583;RPL=0;RPP=191.928;RPPR=1268.98;RPR=87;RUN=1;SAF=87;SAP=191.928;SAR=0;SRF=580;SRP=1243.06;SRR=3;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:99:87,8,0,0:87:3381:8,0,0:314,0,0:0,-0.321493,-272.279,-26.1896,-274.688,-300.513,-26.1896,-274.688,-300.513,-300.513 0|1:133:112,19,0,1:112:4324:19,0,1:748,0,41:-27.8086,0,-349.37,-61.5239,-355.09,-416.616,-58.139,-351.706,-413.232,-412.931 0|0:163:152,6,0,0:152:5891:6,0,0:221,0,0:0,-28.2578,-510.398,-45.7566,-512.204,-529.719,-45.7566,-512.204,-529.719,-529.719 0|1:189:152,27,3,6:152:5891:27,3,6:1049,80,243:-38.7424,0,-475.852,-78.2144,-477.688,-561.268,-64.4561,-463.942,-542.133,-546.619 0|1:43:36,5,1,0:36:1400:5,1,0:200,37,0:-5.65256,0,-109.398,-13.4666,-107.876,-124.053,-16.4896,-110.903,-124.354,-127.381 0|1:79:44,22,5,4:44:1704:22,5,4:862,180,142:-57.6563,0,-133.375,-56.2179,-125.313,-194.691,-59.3365,-128.432,-184.63,-198.111 dDocent_Contig_14028 24 . T C 177.414 . AB=0.147727;ABP=97.8642;AC=2;AF=0.166667;AN=12;AO=13;CIGAR=1X;DP=273;DPB=273;DPRA=0.951351;EPP=31.2394;EPPR=567.593;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.692308;PAIREDR=0.657692;PAO=0;PQA=0;PQR=0;PRO=0;QA=519;QR=10402;RO=260;RPL=0;RPP=31.2394;RPPR=567.593;RPR=13;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=260;SRP=567.593;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:944:0:0:0,-7.22472,-85.2611 0/0:66:66,0:66:2652:0:0:0,-19.868,-238.802 0/0:37:37,0:37:1480:0:0:0,-11.1381,-133.446 0/0:58:58,0:58:2324:0:0:0,-17.4597,-209.316 0/1:43:37,6:37:1486:6:237:-8.75703,0,-121.039 0/1:45:38,7:38:1516:7:282:-12.2062,0,-123.132 dDocent_Contig_14029 17 . G A 185.784 . AB=0.196078;ABP=43.9277;AC=1;AF=0.0833333;AN=12;AO=10;CIGAR=1X;DP=131;DPB=131;DPRA=3.1875;EPP=24.725;EPPR=265.758;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.404959;PAO=0;PQA=0;PQR=0;PRO=0;QA=390;QR=4752;RO=121;RPL=0;RPP=24.725;RPPR=265.758;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=121;SRP=265.758;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:757:0:0:0,-5.71957,-68.4496 0/1:51:41,10:41:1589:10:390:-20.1013,0,-127.893 0/0:12:12,0:12:485:0:0:0,-3.61236,-44.0012 0/0:17:17,0:17:670:0:0:0,-5.11751,-60.6296 0/0:13:13,0:13:513:0:0:0,-3.91339,-46.5162 0/0:19:19,0:19:738:0:0:0,-5.71957,-66.7461 dDocent_Contig_14030 21 . A C 67.7057 . AB=0.333333;ABP=5.18177;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=168;DPB=168;DPRA=0.283019;EPP=9.52472;EPPR=361.303;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=8.67362e-19;PAIRED=1;PAIREDR=0.842424;PAO=0;PQA=0;PQR=0;PRO=0;QA=118;QR=6364;RO=165;RPL=0;RPP=9.52472;RPPR=361.303;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=165;SRP=361.303;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:965:0:0:0,-7.52575,-87.1504 0/1:9:6,3:6:236:3:118:-8.29345,0,-18.9021 0/0:8:8,0:8:308:0:0:0,-2.40824,-28.0742 0/0:33:33,0:33:1265:0:0:0,-9.93399,-114.12 0/0:35:35,0:35:1374:0:0:0,-10.536,-123.931 0/0:58:58,0:58:2216:0:0:0,-17.4597,-199.628 dDocent_Contig_14031 117 . T G 104.217 . AB=0.150943;ABP=59.0998;AC=2;AF=0.166667;AN=12;AO=9;CIGAR=1X;DP=166;DPB=166;DPRA=0.747368;EPP=22.5536;EPPR=343.931;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.666667;PAIREDR=0.624204;PAO=0;PQA=0;PQR=0;PRO=0;QA=359;QR=6284;RO=157;RPL=9;RPP=22.5536;RPPR=343.931;RPR=0;RUN=1;SAF=0;SAP=22.5536;SAR=9;SRF=0;SRP=343.931;SRR=157;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:19:19,0:19:736:0:0:0,-5.71957,-66.5491 0/1:34:28,6:28:1127:6:242:-11.9225,0,-91.4772 0/1:19:17,2:17:674:2:76:-1.49524,0,-55.2733 0/0:18:17,1:17:680:1:41:0,-1.32397,-57.4344 0/0:21:21,0:21:841:0:0:0,-6.32163,-76.0005 0/0:55:55,0:55:2226:0:0:0,-16.5566,-200.496 dDocent_Contig_14032 1 . N G 3180.27 . AB=0;ABP=0;AC=12;AF=1;AN=12;AO=90;CIGAR=1X;DP=90;DPB=90;DPRA=0;EPP=198.443;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3502;QR=0;RO=0;RPL=0;RPP=198.443;RPPR=0;RPR=90;RUN=1;SAF=90;SAP=198.443;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:19:0,19:0:0:19:727:-65.7433,-5.71957,0 1/1:26:0,26:0:0:26:1004:-90.6503,-7.82678,0 1/1:9:0,9:0:0:9:354:-32.2208,-2.70927,0 1/1:9:0,9:0:0:9:347:-31.5848,-2.70927,0 1/1:11:0,11:0:0:11:437:-39.6843,-3.31133,0 1/1:16:0,16:0:0:16:633:-57.2988,-4.81648,0 dDocent_Contig_14033 43 . A G 150.348 . AB=0.714286;ABP=5.80219;AC=1;AF=0.1;AN=10;AO=5;CIGAR=1X;DP=119;DPB=119;DPRA=0.25;EPP=13.8677;EPPR=250.558;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=204;QR=4573;RO=114;RPL=0;RPP=13.8677;RPPR=250.558;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=114;SRP=250.558;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:31,0:31:1243:0:0:0,-9.33193,-112.142 0/0:20:20,0:20:803:0:0:0,-6.0206,-72.5869 0/0:38:38,0:38:1532:0:0:0,-11.4391,-138.118 0/0:23:23,0:23:913:0:0:0,-6.92369,-82.4754 0/1:7:2,5:2:82:5:204:-16.6368,0,-5.67247 ./.:.:.:.:.:.:.:. dDocent_Contig_14034 17 . G A 291.882 . AB=0.323529;ABP=12.2071;AC=1;AF=0.0833333;AN=12;AO=11;CIGAR=1X;DP=99;DPB=99;DPRA=2.61538;EPP=26.8965;EPPR=194.1;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=451;QR=3521;RO=88;RPL=0;RPP=26.8965;RPPR=194.1;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=88;SRP=194.1;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:30:30,0:30:1195:0:0:0,-9.0309,-107.822 0/0:14:14,0:14:569:0:0:0,-4.21442,-51.5519 0/0:17:17,0:17:673:0:0:0,-5.11751,-60.8951 0/1:34:23,11:23:920:11:451:-30.7107,0,-72.8695 0/0:3:3,0:3:123:0:0:0,-0.90309,-11.4648 0/0:1:1,0:1:41:0:0:0,-0.30103,-4.09457 dDocent_Contig_14035 132 . C T 4309.06 . AB=0.759259;ABP=34.5369;AC=3;AF=0.3;AN=10;AO=133;CIGAR=1X;DP=273;DPB=273;DPRA=1.75;EPP=291.816;EPPR=307.016;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5024;QR=5044;RO=140;RPL=133;RPP=291.816;RPPR=307.016;RPR=0;RUN=1;SAF=0;SAP=291.816;SAR=133;SRF=0;SRP=307.016;SRR=140;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:929:0:0:0,-7.82678,-83.9225 0/0:69:69,0:69:2498:0:0:0,-20.7711,-225.059 ./.:.:.:.:.:.:.:. 0/0:31:31,0:31:1099:0:0:0,-9.33193,-99.2116 0/1:54:13,41:13:477:41:1546:-123.15,0,-27.0171 1/1:93:1,92:1:41:92:3478:-309.057,-23.9012,0 dDocent_Contig_14036 10 . G A 821.286 . AB=0.137131;ABP=545.127;AC=5;AF=0.416667;AN=12;AO=65;CIGAR=1X;DP=572;DPB=572;DPRA=0.967347;EPP=144.156;EPPR=1103.95;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.6726;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.502959;PAO=0;PQA=0;PQR=0;PRO=0;QA=2581;QR=20129;RO=507;RPL=0;RPP=144.156;RPPR=1103.95;RPR=65;RUN=1;SAF=65;SAP=144.156;SAR=0;SRF=507;SRP=1103.95;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:77:64,13:64:2530:13:511:-23.1576,0,-204.61 0/1:136:121,15:121:4782:15:604:-13.7581,0,-389.237 0/1:84:69,15:69:2706:15:585:-27.6971,0,-218.339 0/1:88:74,14:74:2977:14:559:-24.1623,0,-241.264 0/1:89:81,8:81:3236:8:322:-2.55557,0,-264.48 0/0:98:98,0:98:3898:0:0:0,-29.5009,-350.819 dDocent_Contig_14037 31 . T A 1056.06 . AB=0.357143;ABP=22.8638;AC=2;AF=0.166667;AN=12;AO=42;CIGAR=1X;DP=632;DPB=632;DPRA=0.608142;EPP=94.2121;EPPR=1282.01;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1627;QR=21720;RO=589;RPL=0;RPP=94.2121;RPPR=1282.01;RPR=42;RUN=1;SAF=42;SAP=94.2121;SAR=0;SRF=589;SRP=1282.01;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:68:55,13:55:2003:13:486:-23.5985,0,-160.035 0/0:127:124,2:124:4639:2:50:0,-33.3282,-412.873 0/1:44:17,27:17:603:27:1091:-85.2298,0,-41.3403 0/0:56:56,0:56:2069:0:0:0,-16.8577,-186.439 0/0:192:192,0:192:7032:0:0:0,-57.7978,-632.792 0/0:145:145,0:145:5374:0:0:0,-43.6493,-483.679 dDocent_Contig_14038 15 . C A 2889.28 . AB=0.29397;ABP=149.754;AC=6;AF=0.5;AN=12;AO=117;CIGAR=1X;DP=398;DPB=398;DPRA=0;EPP=257.073;EPPR=613.194;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.957265;PAIREDR=0.960854;PAO=0;PQA=0;PQR=0;PRO=0;QA=4645;QR=11349;RO=281;RPL=0;RPP=257.073;RPPR=613.194;RPR=117;RUN=1;SAF=117;SAP=257.073;SAR=0;SRF=281;SRP=613.194;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:60:35,25:35:1406:25:993:-71.5996,0,-108.73 0/1:63:51,12:51:2068:12:475:-24.1341,0,-167.331 0/1:73:47,26:47:1893:26:1037:-71.6485,0,-148.592 0/1:92:74,18:74:2982:18:705:-36.0809,0,-240.766 0/1:49:33,16:33:1342:16:646:-43.7233,0,-106.285 0/1:61:41,20:41:1658:20:789:-52.9632,0,-131.077 dDocent_Contig_14039 32 . G C 1807.6 . AB=0.474359;ABP=3.45573;AC=5;AF=0.416667;AN=12;AO=58;CIGAR=1X;DP=124;DPB=124;DPRA=1.98;EPP=128.956;EPPR=146.327;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2308;QR=2621;RO=66;RPL=0;RPP=128.956;RPPR=146.327;RPR=58;RUN=1;SAF=58;SAP=128.956;SAR=0;SRF=66;SRP=146.327;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:29:5,24:5:194:24:952:-77.2527,0,-9.09866 0/1:17:7,10:7:278:10:397:-30.9687,0,-20.2717 1/1:21:0,21:0:0:21:838:-75.7296,-6.32163,0 0/1:32:29,3:29:1143:3:121:-1.64703,0,-93.5134 0/0:18:18,0:18:727:0:0:0,-5.41854,-65.7551 0/0:7:7,0:7:279:0:0:0,-2.10721,-25.4803 dDocent_Contig_14040 31 . C G 55.5116 . AB=0.122449;ABP=63.6786;AC=3;AF=0.25;AN=12;AO=6;CIGAR=1X;DP=92;DPB=92;DPRA=1.13953;EPP=16.0391;EPPR=189.757;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.333333;PAIREDR=0.569767;PAO=0;PQA=0;PQR=0;PRO=0;QA=243;QR=3369;RO=86;RPL=0;RPP=16.0391;RPPR=189.757;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=86;SRP=189.757;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:1012:0:0:0,-7.82678,-91.3792 0/1:25:23,2:23:901:2:82:-0.253928,0,-73.8684 0/0:4:4,0:4:156:0:0:0,-1.20412,-14.4157 0/1:14:11,3:11:438:3:121:-7.06578,0,-35.5608 0/0:13:13,0:13:505:0:0:0,-3.91339,-45.7947 0/1:10:9,1:9:357:1:40:-0.985379,0,-29.481 dDocent_Contig_14041 7 . A C 164.48 . AB=0.261905;ABP=23.691;AC=4;AF=0.4;AN=10;AO=11;CIGAR=1M2X1M2X1M7I8M;DP=141;DPB=144.133;DPRA=0.636364;EPP=26.8965;EPPR=250.558;GTI=0;LEN=1;MEANALT=1;MQM=35;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=385;QR=4450;RO=114;RPL=0;RPP=26.8965;RPPR=250.558;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=114;SRP=250.558;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:18:15,3:15:586:3:105:-3.53877,0,-47.6633 0|0:68:67,0:67:2628:0:0:0,-20.169,-236.275 0|0:16:16,0:16:612:0:0:0,-4.81648,-55.4157 0|1:24:16,8:16:624:8:280:-16.1283,0,-49.2736 1|1:15:0,0:0:0:0:0:0,0,0 .:.:.:.:.:.:.:. dDocent_Contig_14042 14 . G A 10167.2 . AB=0.0463576;ABP=272.92;AC=0;AF=0;AN=12;AO=7;CIGAR=1M1I3M1X1M;DP=521;DPB=582.167;DPRA=0.67713;EPP=18.2106;EPPR=333.074;GTI=0;LEN=1;MEANALT=3.5;MQM=34;MQMR=60;NS=6;NUMALT=3;ODDS=0;PAIRED=0;PAIREDR=0.861842;PAO=0;PQA=0;PQR=0;PRO=0;QA=238;QR=5880;RO=152;RPL=0;RPP=18.2106;RPPR=333.074;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=152;SRP=333.074;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:67:13,0,49,3:13:511:0,49,3:0,1824,102:-143.419,-147.333,-189.37,0,-42.0668,-27.3163,-139.872,-181.908,-34.6163,-181.005 0|0:104:77,2,23,1:77:2979:2,23,1:72,803,34:-40.7624,-58.6063,-302.722,0,-239.407,-237.818,-61.4547,-300.837,-242.255,-305.871 0|0:47:19,5,16,7:19:718:5,16,7:166,607,226:-43.7865,-37.434,-94.7816,0,-46.8181,-54.074,-33.1854,-79.9636,-42.5688,-89.9278 0|0:80:32,0,46,2:32:1240:0,46,2:0,1751,55:-132.781,-142.414,-244.28,0,-101.994,-88.1471,-138.612,-240.477,-98.196,-239.875 0|0:112:8,0,99,0:8:314:0,99,0:0,3763,0:-308.776,-311.184,-337.009,-3.89524,-29.802,0,-311.184,-337.009,-29.802,-337.009 0|0:111:3,0,106,2:3:118:0,106,2:0,4074,54:-354.412,-355.316,-365.023,-22.1105,-31.9092,0,-351.601,-361.308,-28.2535,-360.706 dDocent_Contig_14044 18 . C T 30.7499 . AB=0.285714;ABP=5.80219;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=1X;DP=101;DPB=101;DPRA=0.37234;EPP=7.35324;EPPR=215.815;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.77551;PAO=0;PQA=0;PQR=0;PRO=0;QA=71;QR=3887;RO=98;RPL=0;RPP=7.35324;RPPR=215.815;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=98;SRP=215.815;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:25:25,0:25:973:0:0:0,-7.52575,-87.8702 0/0:19:19,0:19:757:0:0:0,-5.71957,-68.4503 0/1:7:4,2:4:163:2:71:-4.5975,0,-12.9069 0/0:17:17,0:17:689:0:0:0,-5.11751,-62.3391 0/0:19:19,0:19:746:0:0:0,-5.71957,-67.4596 0/0:14:14,0:14:559:0:0:0,-4.21442,-50.6521 dDocent_Contig_14046 20 . C T 71.4735 . AB=0.2;ABP=18.6449;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=157;DPB=157;DPRA=0.729927;EPP=11.6962;EPPR=335.246;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.947712;PAO=0;PQA=0;PQR=0;PRO=0;QA=159;QR=6169;RO=153;RPL=0;RPP=11.6962;RPPR=335.246;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=153;SRP=335.246;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:31:31,0:31:1261:0:0:0,-9.33193,-113.754 0/1:20:16,4:16:648:4:159:-8.67023,0,-52.6329 0/0:18:18,0:18:726:0:0:0,-5.41854,-65.6652 0/0:28:28,0:28:1122:0:0:0,-8.42884,-101.257 0/0:35:35,0:35:1405:0:0:0,-10.536,-126.703 0/0:25:25,0:25:1007:0:0:0,-7.52575,-90.9221 dDocent_Contig_14047 209 . N G 77.8076 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:82:-7.77968,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_14048 10 . C T 225.599 . AB=0.22449;ABP=35.3165;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=306;DPB=306;DPRA=0.381323;EPP=26.8965;EPPR=643.595;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=3.46945e-18;PAIRED=0.909091;PAIREDR=0.786441;PAO=0;PQA=0;PQR=0;PRO=0;QA=442;QR=11816;RO=295;RPL=0;RPP=26.8965;RPPR=643.595;RPR=11;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=295;SRP=643.595;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:48:48,0:48:1924:0:0:0,-14.4494,-173.357 0/0:86:86,0:86:3423:0:0:0,-25.8886,-308.118 0/0:54:54,0:54:2179:0:0:0,-16.2556,-196.277 0/0:69:69,0:69:2772:0:0:0,-20.7711,-249.588 0/1:20:17,3:17:671:3:118:-4.98212,0,-54.6943 0/1:29:21,8:21:847:8:324:-20.7995,0,-67.8114 dDocent_Contig_14050 1 . N G 205.08 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=6;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=54.3333;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=230;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:81:-6.4347,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:4:0,4:0:0:4:149:-13.7716,-1.20412,0 dDocent_Contig_14051 22 . C A 32.7893 . AB=0.131579;ABP=47.8112;AC=2;AF=0.166667;AN=12;AO=6;CIGAR=1M1I1X2M1X;DP=123;DPB=124.2;DPRA=1.15789;EPP=16.0391;EPPR=257.073;GTI=0;LEN=1;MEANALT=1;MQM=58;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.42735;PAO=0;PQA=0;PQR=0;PRO=0;QA=230;QR=4574;RO=117;RPL=0;RPP=16.0391;RPPR=257.073;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=117;SRP=257.073;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:23:20,3:20:787:3:116:-3.89309,0,-64.2262 0|0:28:27,1:27:1049:1:39:0,-4.53228,-90.8121 0|0:18:18,0:18:710:0:0:0,-5.41854,-64.2305 0|1:15:13,2:13:518:2:75:-2.58829,0,-42.4529 0|0:16:16,0:16:623:0:0:0,-4.81648,-56.401 0|0:23:23,0:23:887:0:0:0,-6.92369,-80.1389 dDocent_Contig_14052 53 . G T 320.305 . AB=0.6;ABP=3.44459;AC=3;AF=0.25;AN=12;AO=10;CIGAR=1X;DP=236;DPB=236;DPRA=0.107143;EPP=3.87889;EPPR=493.763;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.995575;PAO=0;PQA=0;PQR=0;PRO=0;QA=378;QR=8675;RO=226;RPL=10;RPP=24.725;RPPR=493.763;RPR=0;RUN=1;SAF=4;SAP=3.87889;SAR=6;SRF=226;SRP=493.763;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:70:70,0:70:2704:0:0:0,-21.0721,-243.491 0/0:66:66,0:66:2518:0:0:0,-19.868,-226.782 0/0:27:27,0:27:1070:0:0:0,-8.12781,-96.5926 0/0:61:61,0:61:2303:0:0:0,-18.3628,-207.444 1/1:7:0,7:0:0:7:260:-23.755,-2.10721,0 0/1:5:2,3:2:80:3:118:-9.49736,0,-6.08664 dDocent_Contig_14054 25 . G A 129.661 . AB=0.12605;ABP=147.55;AC=4;AF=0.333333;AN=12;AO=16;CIGAR=1X;DP=159;DPB=159;DPRA=3.33333;EPP=37.7539;EPPR=313.531;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=634;QR=5742;RO=143;RPL=0;RPP=37.7539;RPPR=313.531;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=143;SRP=313.531;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:33:29,4:29:1171:4:155:-4.39077,0,-95.7335 0/0:31:30,1:30:1206:1:37:0,-5.6341,-105.117 0/1:9:8,1:8:317:1:40:-1.28641,0,-26.1851 0/1:54:49,5:49:1966:5:204:-2.48841,0,-160.881 0/1:23:18,5:18:721:5:198:-11.2726,0,-58.2907 0/0:9:9,0:9:361:0:0:0,-2.70927,-32.8534 dDocent_Contig_14055 14 . C T 398.554 . AB=0.139535;ABP=245.66;AC=3;AF=0.25;AN=12;AO=39;CIGAR=1X;DP=402;DPB=402;DPRA=0;EPP=87.6977;EPPR=791.255;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.986226;PAO=0;PQA=0;PQR=0;PRO=0;QA=1577;QR=14470;RO=363;RPL=0;RPP=87.6977;RPPR=791.255;RPR=39;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=363;SRP=791.255;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:61:58,3:58:2320:3:123:0,-6.89804,-197.495 0/0:77:74,3:74:2964:3:123:0,-11.7145,-255.387 0/0:49:46,3:46:1833:3:123:0,-3.28568,-153.71 0/1:83:73,10:73:2896:10:401:-11.4612,0,-235.758 0/1:91:76,15:76:2998:15:604:-27.3054,0,-242.508 0/1:41:36,5:36:1459:5:203:-6.31062,0,-119.208 dDocent_Contig_14056 133 . G A 136.26 . AB=0.134328;ABP=158.643;AC=3;AF=0.25;AN=12;AO=22;CIGAR=1X;DP=295;DPB=295;DPRA=1.275;EPP=50.7827;EPPR=595.822;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.863636;PAIREDR=0.699634;PAO=0;PQA=0;PQR=0;PRO=0;QA=786;QR=9978;RO=273;RPL=0;RPP=50.7827;RPPR=595.822;RPR=22;RUN=1;SAF=0;SAP=50.7827;SAR=22;SRF=0;SRP=595.822;SRR=273;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:38:33,5:33:1218:5:176:-4.74521,0,-98.4781 0/1:43:37,6:37:1317:6:221:-7.30251,0,-105.871 0/0:40:40,0:40:1436:0:0:0,-12.0412,-129.524 0/0:57:55,2:55:1990:2:73:0,-10.2274,-172.417 0/0:64:62,2:62:2331:2:67:0,-12.9034,-203.646 0/1:53:46,7:46:1686:7:249:-6.79996,0,-136.051 dDocent_Contig_14057 21 . T C 1596.32 . AB=0.459677;ABP=4.76149;AC=3;AF=0.25;AN=12;AO=58;CIGAR=1X;DP=228;DPB=228;DPRA=1.20149;EPP=128.956;EPPR=372.161;GTI=0;LEN=1;MEANALT=1;MQM=59.8276;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.211765;PAO=0;PQA=0;PQR=0;PRO=0;QA=2275;QR=6755;RO=170;RPL=0;RPP=128.956;RPPR=372.161;RPR=58;RUN=1;SAF=58;SAP=128.956;SAR=0;SRF=170;SRP=372.161;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:22:10,12:10:398:12:479:-36.8354,0,-29.5556 0/1:24:12,12:12:477:12:461:-34.6076,0,-36.0542 0/1:78:45,33:45:1788:33:1296:-93.4104,0,-137.648 0/0:37:36,1:36:1410:1:39:0,-7.24155,-123.255 0/0:27:27,0:27:1084:0:0:0,-8.12781,-97.8474 0/0:40:40,0:40:1598:0:0:0,-12.0412,-144.051 dDocent_Contig_14058 68 . G C 1049.83 . AB=0.304094;ABP=60.0146;AC=4;AF=0.5;AN=8;AO=52;CIGAR=1X;DP=171;DPB=171;DPRA=0;EPP=115.927;EPPR=261.416;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1806;QR=4105;RO=119;RPL=52;RPP=115.927;RPPR=261.416;RPR=0;RUN=1;SAF=52;SAP=115.927;SAR=0;SRF=119;SRP=261.416;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:34:26,8:26:875:8:280:-15.305,0,-68.8233 0/1:13:9,4:9:314:4:139:-8.9393,0,-24.6845 0/1:72:48,24:48:1668:24:861:-56.1381,0,-128.728 0/1:52:36,16:36:1248:16:526:-31.9986,0,-96.9707 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_14059 9 . A G 2371.83 . AB=0.0647773;ABP=409.392;AC=0;AF=0;AN=12;AO=16;CIGAR=1X7M;DP=362;DPB=362;DPRA=0;EPP=37.7539;EPPR=263.657;GTI=0;LEN=1;MEANALT=6.25;MQM=60;MQMR=60;NS=6;NUMALT=9;ODDS=0;PAIRED=0;PAIREDR=0.580645;PAO=0;PQA=0;PQR=0;PRO=0;QA=579;QR=4890;RO=124;RPL=0;RPP=37.7539;RPPR=272.273;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=123;SRP=263.657;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:47:20,0,2,0,9,2,0,1,0,13:20:794:0,2,0,9,2,0,1,0,13:0,77,0,359,81,0,41,0,510:-35.916,-41.9366,-107.303,-35.6154,-100.982,-100.38,-41.9366,-107.303,-100.982,-107.303,-12.3689,-77.7367,-71.4152,-77.7367,-75.0275,-35.2567,-100.624,-94.3023,-100.624,-71.057,-100.022,-41.9366,-107.303,-100.982,-107.303,-77.7367,-100.624,-107.303,-38.552,-103.919,-97.5975,-103.919,-74.3523,-97.2395,-103.919,-103.618,-41.9366,-107.303,-100.982,-107.303,-77.7367,-100.624,-107.303,-103.919,-107.303,0,-65.3653,-59.044,-65.3653,-35.7988,-58.6857,-65.3653,-61.9809,-65.3653,-61.4519 0|0:68:25,6,0,3,14,5,0,4,5,4:25:983:6,0,3,14,5,0,4,5,4:225,0,118,536,201,0,153,201,159:-36.4531,-25.5536,-104.606,-43.9788,-106.412,-124.838,-34.272,-96.7054,-115.131,-114.228,0,-62.4328,-80.8582,-71.1517,-76.6438,-27.4129,-89.8468,-108.273,-98.5662,-64.293,-106.768,-43.9788,-106.412,-124.838,-115.131,-80.8582,-108.273,-124.838,-31.4287,-93.8617,-112.288,-102.581,-68.3082,-95.7225,-112.288,-111.083,-27.4133,-89.8472,-108.273,-98.5665,-64.2934,-91.7079,-108.273,-95.7228,-106.768,-30.8872,-93.3208,-111.747,-102.04,-67.767,-95.1815,-111.747,-99.1964,-95.1819,-110.543 0|0:67:23,0,6,0,12,7,1,3,1,9:23:914:0,6,0,12,7,1,3,1,9:0,239,0,457,279,27,122,38,360:-30.5542,-37.4779,-112.732,-17.7958,-93.0507,-91.2445,-37.4779,-112.732,-93.0507,-112.732,0,-75.2533,-55.5721,-75.2533,-71.6409,-14.5009,-89.756,-70.0745,-89.756,-52.2774,-87.6488,-35.3519,-110.605,-90.924,-110.605,-73.1268,-87.6293,-110.304,-27.4134,-102.668,-82.9867,-102.668,-65.1894,-79.692,-100.541,-101.765,-34.3616,-109.616,-89.9344,-109.616,-72.137,-86.6397,-107.489,-99.5518,-109.315,-7.82163,-83.0772,-63.3956,-83.0772,-45.5986,-60.1009,-80.9505,-73.0131,-79.9609,-80.3679 0|0:58:24,0,0,3,3,9,1,5,1,8:24:936:0,0,3,3,9,1,5,1,8:0,0,105,120,359,39,203,41,322:-22.344,-29.5688,-106.505,-29.5688,-106.505,-106.505,-21.0345,-97.9689,-97.9689,-97.0658,-19.6825,-96.6189,-96.6189,-88.0832,-95.7159,0,-76.9378,-76.9378,-68.4022,-67.0517,-74.2285,-26.3629,-103.299,-103.299,-94.763,-93.413,-73.7319,-102.998,-12.8237,-89.761,-89.761,-81.2252,-79.875,-60.1935,-86.5551,-88.2559,-26.1841,-103.12,-103.12,-94.5845,-93.2345,-73.5532,-99.9144,-86.3765,-102.819,-3.02642,-79.9644,-79.9644,-71.4288,-70.0784,-50.3967,-76.7585,-63.2202,-76.5799,-77.5562 0|0:84:23,0,6,0,22,0,13,0,0,20:23:906:0,6,0,22,0,13,0,0,20:0,234,0,864,0,474,0,0,790:-64.1387,-71.0624,-145.6,-51.8274,-126.366,-124.559,-71.0624,-145.6,-126.366,-145.6,0,-74.5397,-55.3048,-74.5397,-67.9171,-71.0624,-145.6,-126.366,-145.6,-74.5397,-145.6,-32.3467,-106.883,-87.6486,-106.883,-35.824,-106.883,-102.97,-71.0624,-145.6,-126.366,-145.6,-74.5397,-145.6,-106.883,-145.6,-71.0624,-145.6,-126.366,-145.6,-74.5397,-145.6,-106.883,-145.6,-145.6,-6.05817,-80.598,-61.3631,-80.598,-9.53583,-80.598,-41.8819,-80.598,-80.598,-74.5774 0|0:38:9,0,0,0,18,0,1,0,0,10:9:357:0,0,0,18,0,1,0,0,10:0,0,0,708,0,39,0,0,399:-58.9986,-61.7079,-91.0962,-61.7079,-91.0962,-91.0962,-61.7079,-91.0962,-91.0962,-91.0962,-3.47466,-32.8619,-32.8619,-32.8619,-27.4434,-61.7079,-91.0962,-91.0962,-91.0962,-32.8619,-91.0962,-58.5022,-87.8904,-87.8904,-87.8904,-29.6565,-87.8904,-87.5894,-61.7079,-91.0962,-91.0962,-91.0962,-32.8619,-91.0962,-87.8904,-91.0962,-61.7079,-91.0962,-91.0962,-91.0962,-32.8619,-91.0962,-87.8904,-91.0962,-91.0962,-28.8454,-58.2345,-58.2345,-58.2345,0,-58.2345,-55.0287,-58.2345,-58.2345,-55.2242 dDocent_Contig_14060 18 . T C 371.099 . AB=0.121306;ABP=803.953;AC=2;AF=0.166667;AN=12;AO=123;CIGAR=1X;DP=1814;DPB=1814;DPRA=0;EPP=270.101;EPPR=3670.63;GTI=0;LEN=1;MEANALT=1.33333;MQM=41.5041;MQMR=35.7111;NS=6;NUMALT=1;ODDS=5.55112e-17;PAIRED=0;PAIREDR=0.132623;PAO=0;PQA=0;PQR=0;PRO=0;QA=4953;QR=67171;RO=1689;RPL=0;RPP=270.101;RPPR=3670.63;RPR=123;RUN=1;SAF=123;SAP=270.101;SAR=0;SRF=1689;SRP=3670.63;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:268:265,3:265:10435:3:122:0,-69.6771,-771.958 0/0:296:277,19:277:11093:19:747:0,-23.1368,-748.553 0/1:281:249,32:249:9919:32:1285:-7.44744,0,-619.668 0/0:253:245,7:245:9798:7:283:0,-50.7393,-695.162 0/1:362:316,46:316:12611:46:1864:-32.8843,0,-778.631 0/0:354:337,16:337:13315:16:652:0,-51.7771,-902.866 dDocent_Contig_14062 25 . C T 304.702 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=2;CIGAR=1X3M;DP=237;DPB=237;DPRA=0.493671;EPP=7.35324;EPPR=112.761;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=3;ODDS=6.93889e-18;PAIRED=0;PAIREDR=0.439252;PAO=0;PQA=0;PQR=0;PRO=0;QA=77;QR=7949;RO=214;RPL=0;RPP=7.35324;RPPR=467.705;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=159;SRP=112.761;SRR=55;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:26:22,2,0,2:22:816:2,0,2:75,0,77:0,-0.48483,-66.6281,-6.62266,-67.2301,-73.3732,-0.295282,-60.9066,-67.0497,-66.4477 0|0:75:75,0,0,0:75:2762:0,0,0:0,0,0:0,-22.5772,-248.74,-22.5772,-248.74,-248.74,-22.5772,-248.74,-248.74,-248.74 0|0:40:40,0,0,0:40:1561:0,0,0:0,0,0:0,-12.0412,-140.743,-12.0412,-140.743,-140.743,-12.0412,-140.743,-140.743,-140.743 0|0:43:40,0,3,0:40:1508:0,3,0:0,103,0:0,-12.0412,-135.637,-3.33432,-127.276,-126.373,-12.0412,-135.637,-127.276,-135.637 0|1:39:29,9,0,0:29:995:9,0,0:334,0,0:-18.5731,0,-78.0035,-27.303,-80.7128,-108.048,-27.303,-80.7128,-108.048,-108.048 0|1:14:8,6,0,0:8:307:6,0,0:211,0,0:-15.1183,0,-23.7741,-17.5266,-25.5803,-42.7417,-17.5266,-25.5803,-42.7417,-42.7417 dDocent_Contig_14063 141 . A T 213.904 . AB=0.177083;ABP=89.9597;AC=5;AF=0.416667;AN=12;AO=20;CIGAR=1X;DP=137;DPB=137;DPRA=0;EPP=46.4397;EPPR=257.073;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=750;QR=4403;RO=117;RPL=0;RPP=46.4397;RPPR=257.073;RPR=20;RUN=1;SAF=0;SAP=46.4397;SAR=20;SRF=0;SRP=257.073;SRR=117;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:22,3:22:825:3:113:-3.01355,0,-67.0434 0/0:41:38,3:38:1454:3:113:0,-1.80326,-120.595 0/1:19:17,2:17:647:2:78:-1.6839,0,-52.8453 0/1:40:35,5:35:1284:5:191:-5.51622,0,-103.8 0/1:6:3,3:3:115:3:101:-7.61513,0,-8.91871 0/1:6:2,4:2:78:4:154:-12.4273,0,-5.59729 dDocent_Contig_14065 90 . G A 35.2481 . AB=0.4;ABP=3.44459;AC=1;AF=0.0833333;AN=12;AO=2;CIGAR=1X;DP=96;DPB=96;DPRA=0.274725;EPP=7.35324;EPPR=207.129;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.989362;PAO=0;PQA=0;PQR=0;PRO=0;QA=69;QR=3243;RO=94;RPL=2;RPP=7.35324;RPPR=207.129;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=94;SRP=207.129;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:486:0:0:0,-4.21442,-44.0707 0/0:16:16,0:16:555:0:0:0,-4.81648,-50.2781 0/0:33:33,0:33:1138:0:0:0,-9.93399,-102.727 0/0:24:24,0:24:819:0:0:0,-7.22472,-74.0251 0/1:5:3,2:3:105:2:69:-5.04751,0,-8.29101 0/0:4:4,0:4:140:0:0:0,-1.20412,-12.9449 dDocent_Contig_14066 71 . A T 235.617 . AB=0.175258;ABP=91.8616;AC=4;AF=0.5;AN=8;AO=17;CIGAR=1X;DP=97;DPB=97;DPRA=0;EPP=39.9253;EPPR=176.728;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=630;QR=3120;RO=80;RPL=17;RPP=39.9253;RPPR=176.728;RPR=0;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=80;SRP=176.728;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:7:6,1:6:233:1:39:-1.78935,0,-19.2329 0/1:43:34,9:34:1308:9:334:-17.4652,0,-105.064 0/1:27:22,5:22:874:5:191:-9.43061,0,-70.8414 0/1:20:18,2:18:705:2:66:-0.246546,0,-57.7548 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_14067 7 . A G 78.7263 . AB=0.154762;ABP=89.9726;AC=2;AF=0.166667;AN=12;AO=16;CIGAR=1X;DP=270;DPB=270;DPRA=1.57692;EPP=37.7539;EPPR=550.221;GTI=0;LEN=1;MEANALT=1.25;MQM=54.875;MQMR=58.0278;NS=6;NUMALT=1;ODDS=0;PAIRED=0.875;PAIREDR=0.956349;PAO=0;PQA=0;PQR=0;PRO=0;QA=549;QR=9623;RO=252;RPL=0;RPP=37.7539;RPPR=550.221;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=252;SRP=550.221;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:23,0:23:884:0:0:0,-6.92369,-79.6666 0/1:56:45,10:45:1708:10:319:-8.76328,0,-137.289 0/1:28:25,3:25:961:3:115:-2.29605,0,-73.3184 0/0:61:60,1:60:2272:1:39:0,-14.4663,-199.357 0/0:60:58,2:58:2224:2:76:0,-10.8471,-174.154 0/0:41:41,0:41:1574:0:0:0,-12.3422,-141.93 dDocent_Contig_14068 48 . G C 653.451 . AB=0.136364;ABP=28.2783;AC=0;AF=0;AN=12;AO=3;CIGAR=2X1M1X;DP=163;DPB=163;DPRA=0;EPP=9.52472;EPPR=272.273;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=0.790323;PAO=0;PQA=0;PQR=0;PRO=0;QA=119;QR=4721;RO=124;RPL=3;RPP=9.52472;RPPR=272.273;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=124;SRP=272.273;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:38:29,9,0:29:1112:9,0:320,0:-17.6945,0,-88.9337,-26.4244,-91.643,-117.705 0|0:32:20,12,0:20:775:12,0:456,0:-31.7348,0,-60.4395,-37.7554,-64.0518,-101.425 0|0:21:19,2,0:19:726:2,0:79,0:-1.05391,0,-59.3424,-6.77348,-59.9445,-66.3304 0|0:27:24,3,0:24:916:3,0:114,0:-2.50441,0,-74.6267,-9.72913,-75.5298,-84.879 0|0:23:17,6,0:17:624:6,0:233,0:-14.4162,0,-49.5618,-19.5337,-51.368,-70.5193 0|0:22:15,4,3:15:568:4,3:155,119:-8.18709,0,-45.339,-2.90267,-36.7445,-48.5512 dDocent_Contig_14069 18 . T C 126.515 . AB=0.134615;ABP=63.3104;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1M1X1M;DP=179;DPB=176;DPRA=1.01124;EPP=22.5536;EPPR=352.617;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.888199;PAO=0;PQA=0;PQR=0;PRO=0;QA=353;QR=5886;RO=161;RPL=0;RPP=22.5536;RPPR=352.617;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=161;SRP=352.617;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:35:35,0,0:35:1276:0,0:0,0:0,-10.536,-115.13,-10.536,-115.13,-115.13 0|0:27:27,0,0:27:973:0,0:0,0:0,-8.12781,-87.8795,-8.12781,-87.8795,-87.8795 0|1:23:20,0,3:20:732:0,3:0,117:-3.98622,-10.0068,-69.8054,0,-60.1851,-59.282 0|0:27:27,0,0:27:989:0,0:0,0:0,-8.12781,-89.3235,-8.12781,-89.3235,-89.3235 0|0:38:33,3,2:33:1217:3,2:115,80:0,-0.505006,-99.1008,-3.33721,-93.412,-102.25 0|0:29:19,6,4:19:699:6,4:216,156:-11.8862,0,-55.329,-4.77097,-44.3085,-60.7262 dDocent_Contig_14073 17 . G A 156.344 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=5;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=13.8677;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=8.07091;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=170;QR=0;RO=0;RPL=0;RPP=13.8677;RPPR=0;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:5:0,5:0:0:5:170:-15.6342,-1.50515,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_14074 113 . T C 59.1137 . AB=0.222222;ABP=15.074;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=177;DPB=177;DPRA=1.13253;EPP=18.2106;EPPR=372.161;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=58.9588;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.505882;PAO=0;PQA=0;PQR=0;PRO=0;QA=244;QR=5667;RO=170;RPL=0;RPP=18.2106;RPPR=372.161;RPR=7;RUN=1;SAF=0;SAP=18.2106;SAR=7;SRF=0;SRP=372.161;SRR=170;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:984:0:0:0,-8.72987,-87.5129 0/0:51:50,1:50:1640:1:35:0,-11.8539,-144.382 0/1:18:14,4:14:484:4:139:-7.43415,0,-38.4711 0/0:25:23,2:23:774:2:70:0,-0.878354,-62.2751 0/0:25:25,0:25:851:0:0:0,-7.52575,-76.4119 0/0:29:29,0:29:934:0:0:0,-8.72987,-84.3559 dDocent_Contig_14076 15 . T A 4333.65 . AB=0.154793;ABP=1179.89;AC=4;AF=0.333333;AN=12;AO=176;CIGAR=5M1X11M;DP=1209;DPB=1208.71;DPRA=0;EPP=385.189;EPPR=2050.71;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0.926136;PAIREDR=0.935313;PAO=0;PQA=0;PQR=0;PRO=0;QA=7010;QR=37097;RO=943;RPL=0;RPP=385.189;RPPR=2050.71;RPR=176;RUN=1;SAF=176;SAP=385.189;SAR=0;SRF=943;SRP=2050.71;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:330:289,0,33,5,0:289:11375:0,33,5,0:0,1307,187,0:-20.5975,-107.595,-1043.32,0,-935.763,-925.829,-92.2885,-1028.01,-920.454,-1026.51,-107.595,-1043.32,-935.763,-1028.01,-1043.32 0|1:347:281,0,53,7,0:281:11060:0,53,7,0:0,2112,266,0:-89.3292,-173.919,-1083.73,0,-909.819,-893.864,-152.11,-1061.92,-888.008,-1059.81,-173.919,-1083.73,-909.819,-1061.92,-1083.73 0|1:218:171,0,45,0,0:171:6711:0,45,0,0:0,1780,0,0:-95.0066,-146.483,-698.399,0,-551.921,-538.375,-146.483,-698.399,-551.921,-698.399,-146.483,-698.399,-551.921,-698.399,-698.399 0|1:242:186,0,45,4,0:186:7317:0,45,4,0:0,1811,158,0:-93.2792,-149.271,-751.152,0,-601.9,-588.354,-136.27,-738.151,-588.899,-736.947,-149.271,-751.152,-601.9,-738.151,-751.152 0|0:42:7,4,0,26,3:7:275:4,0,26,3:158,0,1034,122:-83.0197,-72.1259,-93.5398,-85.127,-94.7439,-107.745,0,-9.61465,-22.6152,-14.7884,-75.063,-84.68,-97.6813,-12.55,-96.7782 0|0:30:9,0,0,20,1:9:359:0,0,20,1:0,0,802,41:-63.3543,-66.0635,-95.6293,-66.0635,-95.6293,-95.6293,0,-29.5566,-29.5566,-23.536,-62.679,-92.2449,-92.2449,-26.1715,-91.9439 dDocent_Contig_14077 110 . A G 765.891 . AB=0.388889;ABP=12.6613;AC=3;AF=0.3;AN=10;AO=35;CIGAR=1X;DP=122;DPB=122;DPRA=1.875;EPP=79.0118;EPPR=191.928;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1200;QR=2974;RO=87;RPL=0;RPP=79.0118;RPPR=191.928;RPR=35;RUN=1;SAF=0;SAP=79.0118;SAR=35;SRF=0;SRP=191.928;SRR=87;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:46:34,12:34:1150:12:424:-24.6494,0,-89.9527 ./.:.:.:.:.:.:.:. 0/1:14:3,11:3:95:11:384:-30.6799,0,-4.64979 0/1:30:18,12:18:618:12:392:-26.5606,0,-46.9119 0/0:19:19,0:19:660:0:0:0,-5.71957,-59.7249 0/0:13:13,0:13:451:0:0:0,-3.91339,-40.9218 dDocent_Contig_14078 31 . T G 2002.14 . AB=0.165217;ABP=114.964;AC=2;AF=0.166667;AN=12;AO=19;CIGAR=2X;DP=324;DPB=324;DPRA=1.49351;EPP=44.2683;EPPR=521.992;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.949791;PAO=0;PQA=0;PQR=0;PRO=0;QA=744;QR=9365;RO=239;RPL=0;RPP=44.2683;RPPR=521.992;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=239;SRP=521.992;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:47:42,5,0:42:1632:5,0:187,0:-3.04345,0,-132.972,-15.6867,-134.477,-149.788 0|0:36:34,0,2:34:1352:0,2:0,81:0,-10.235,-121.541,-3.15135,-114.861,-114.259 0|1:68:54,14,0:54:2103:14,0:557,0:-30.0051,0,-168.986,-46.2608,-173.201,-219.066 0|0:41:38,0,3:38:1517:0,3:0,120:0,-11.4391,-136.378,-1.15492,-126.493,-125.59 0|0:82:26,0,55:26:995:0,55:0,2171:-170.777,-178.604,-260.232,0,-81.6053,-65.0486 0|0:50:45,0,5:45:1766:0,5:0,203:-3.60156,-17.1479,-162.361,0,-145.618,-144.112 dDocent_Contig_14079 55 . A T 1062.54 . AB=0.0895522;ABP=101.051;AC=2;AF=0.2;AN=10;AO=6;CIGAR=2X3M3D19M;DP=162;DPB=158.667;DPRA=3.35;EPP=16.0391;EPPR=165.871;GTI=0;LEN=1;MEANALT=9.5;MQM=51;MQMR=60;NS=5;NUMALT=8;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=236;QR=2578;RO=75;RPL=6;RPP=16.0391;RPPR=165.871;RPR=0;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=75;SRP=165.871;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:37:23,0,1,0,0,3,0,2,2:23:790:0,1,0,0,3,0,2,2:0,10,0,0,119,0,14,14:-2.92203,-9.84572,-74.0765,-9.25542,-73.4829,-73.1819,-9.84572,-74.0765,-73.4829,-74.0765,-9.84572,-74.0765,-73.4829,-74.0765,-74.0765,0,-64.2718,-63.6784,-64.2718,-64.2718,-63.3687,-9.84572,-74.0765,-73.4829,-74.0765,-74.0765,-64.2718,-74.0765,-9.21157,-73.4313,-72.8385,-73.4313,-73.4313,-63.6273,-73.4313,-72.8293,-9.21157,-73.4313,-72.8385,-73.4313,-73.4313,-63.6273,-73.4313,-72.7878,-72.8293 0|0:39:15,0,0,0,4,9,0,1,2:15:512:0,0,0,4,9,0,1,2:0,0,0,159,344,0,7,14:-23.7721,-28.2876,-69.8608,-28.2876,-69.8608,-69.8608,-28.2876,-69.8608,-69.8608,-69.8608,-15.2712,-56.8576,-56.8576,-56.8576,-55.6535,0,-41.6133,-41.6133,-41.6133,-28.6026,-38.9041,-28.2876,-69.8608,-69.8608,-69.8608,-56.8576,-41.6133,-69.8608,-27.9675,-69.5378,-69.5378,-69.5378,-56.5351,-41.2914,-69.5378,-69.2368,-27.6482,-69.2152,-69.2152,-69.2152,-56.2129,-40.97,-69.2152,-68.893,-68.6132 0|0:48:22,3,0,0,0,15,0,0,2:22:763:3,0,0,0,15,0,0,2:118,0,0,0,592,0,0,14:-42.1923,-39.0985,-100.237,-48.815,-101.14,-110.85,-48.815,-101.14,-110.85,-110.85,-48.815,-101.14,-110.85,-110.85,-110.85,0,-52.4,-62.1155,-62.1155,-62.1155,-57.6001,-48.815,-101.14,-110.85,-110.85,-110.85,-62.1155,-110.85,-48.815,-101.14,-110.85,-110.85,-110.85,-62.1155,-110.85,-110.85,-48.1774,-100.494,-110.204,-110.204,-110.204,-61.4724,-110.204,-110.204,-109.602 0|0:28:15,0,2,0,2,4,2,0,1:15:513:0,2,0,2,4,2,0,1:0,25,0,77,163,78,0,7:-8.98858,-13.504,-55.1754,-11.8842,-53.5419,-52.9398,-13.504,-55.1754,-53.5419,-55.1754,-7.20247,-48.8872,-47.2545,-48.8872,-48.2852,0,-41.7124,-40.0801,-41.7124,-35.4218,-40.5083,-7.07239,-48.7579,-47.1251,-48.7579,-42.4688,-35.2924,-48.1558,-13.504,-55.1754,-53.5419,-55.1754,-48.8872,-41.7124,-48.7579,-55.1754,-13.1925,-54.8554,-53.2232,-54.8554,-48.5677,-41.3933,-48.4384,-54.8554,-54.5544 .:.:.:.:.:.:.:. 1|1:10:0,0,0,10,0,0,0,0,0:0:0:0,0,10,0,0,0,0,0:0,0,393,0,0,0,0,0:-35.6697,-35.6697,-35.6697,-35.6697,-35.6697,-35.6697,-3.0103,-3.0103,-3.0103,0,-35.6697,-35.6697,-35.6697,-3.0103,-35.6697,-35.6697,-35.6697,-35.6697,-3.0103,-35.6697,-35.6697,-35.6697,-35.6697,-35.6697,-3.0103,-35.6697,-35.6697,-35.6697,-35.6697,-35.6697,-35.6697,-3.0103,-35.6697,-35.6697,-35.6697,-35.6697,-35.6697,-35.6697,-35.6697,-3.0103,-35.6697,-35.6697,-35.6697,-35.6697,-35.6697 dDocent_Contig_14081 13 . C T 771.607 . AB=0.22561;ABP=110.26;AC=4;AF=0.333333;AN=12;AO=37;CIGAR=1X;DP=515;DPB=515;DPRA=0.233618;EPP=83.3548;EPPR=1038.8;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=0.991614;PAO=0;PQA=0;PQR=0;PRO=0;QA=1462;QR=19172;RO=477;RPL=0;RPP=83.3548;RPPR=1038.8;RPR=37;RUN=1;SAF=37;SAP=83.3548;SAR=0;SRF=477;SRP=1038.8;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:21:19,2:19:762:2:80:-1.26995,0,-62.5718 0/1:31:24,7:24:973:7:266:-14.9658,0,-78.5351 0/1:63:46,17:46:1848:17:688:-43.2846,0,-147.558 0/1:49:38,11:38:1488:11:428:-24.1189,0,-119.41 0/0:189:188,0:188:7581:0:0:0,-56.5936,-681.467 0/0:162:162,0:162:6520:0:0:0,-48.7669,-586.504 dDocent_Contig_14082 63 . A G 322.616 . AB=0.211765;ABP=64.348;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=360;DPB=360;DPRA=1.30275;EPP=46.4397;EPPR=741.311;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.8;PAIREDR=0.511765;PAO=0;PQA=0;PQR=0;PRO=0;QA=732;QR=12481;RO=340;RPL=12;RPP=4.74748;RPPR=3.64897;RPR=8;RUN=1;SAF=12;SAP=4.74748;SAR=8;SRF=165;SRP=3.64897;SRR=175;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:58:58,0:58:2091:0:0:0,-17.4597,-188.453 0/1:85:67,18:67:2426:18:656:-33.7844,0,-192.996 0/0:39:39,0:39:1449:0:0:0,-11.7402,-130.696 0/0:57:55,2:55:2009:2:76:0,-9.94404,-173.849 0/0:57:57,0:57:2125:0:0:0,-17.1587,-191.497 0/0:64:64,0:64:2381:0:0:0,-19.2659,-214.522 dDocent_Contig_14083 1 . N G 115.605 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=5.18177;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=30;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=162;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=1;SAP=5.18177;SAR=3;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:82:-5.63699,-0.60206,0 1/1:2:0,2:0:0:2:80:-5.62143,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_14084 91 . C T 2120.4 . AB=0.328859;ABP=78.8224;AC=2;AF=0.2;AN=10;AO=128;CIGAR=1X;DP=677;DPB=677;DPRA=84.375;EPP=280.959;EPPR=1195.15;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4402;QR=18402;RO=549;RPL=128;RPP=280.959;RPPR=1195.15;RPR=0;RUN=1;SAF=128;SAP=280.959;SAR=0;SRF=549;SRP=1195.15;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:236:218,18:218:7233:18:604:0,-16.366,-596.407 0/1:142:100,42:100:3337:42:1451:-88.1408,0,-257.82 0/0:141:129,12:129:4351:12:415:0,-4.76348,-354.116 0/1:156:100,56:100:3411:56:1932:-127.2,0,-260.262 ./.:.:.:.:.:.:.:. 0/0:2:2,0:2:70:0:0:0,-0.60206,-6.6474 dDocent_Contig_14085 48 . C T 2346.22 . AB=0.536913;ABP=4.77371;AC=6;AF=0.5;AN=12;AO=80;CIGAR=1X;DP=149;DPB=149;DPRA=0;EPP=176.728;EPPR=135.974;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.9375;PAIREDR=0.971014;PAO=0;PQA=0;PQR=0;PRO=0;QA=3207;QR=2779;RO=69;RPL=0;RPP=176.728;RPPR=135.974;RPR=80;RUN=1;SAF=80;SAP=176.728;SAR=0;SRF=69;SRP=152.842;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:5,20:5:205:20:809:-65.6007,0,-11.3093 0/1:44:20,24:20:799:24:936:-71.2825,0,-58.9799 0/1:25:16,9:16:654:9:366:-25.7792,0,-51.6662 0/1:19:6,13:6:245:13:525:-41.8777,0,-16.7099 0/1:21:11,10:11:447:10:407:-30.669,0,-34.2642 0/1:15:11,4:11:429:4:164:-10.6344,0,-34.441 dDocent_Contig_14086 14 . A C 268.128 . AB=0.139785;ABP=212.639;AC=3;AF=0.25;AN=12;AO=32;CIGAR=1X;DP=428;DPB=428;DPRA=0.578182;EPP=12.7819;EPPR=862.913;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8687;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.03125;PAIREDR=0.84596;PAO=0;PQA=0;PQR=0;PRO=0;QA=1165;QR=15583;RO=396;RPL=0;RPP=72.4974;RPPR=862.913;RPR=32;RUN=1;SAF=10;SAP=12.7819;SAR=22;SRF=396;SRP=862.913;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:61:57,4:57:2244:4:138:0,-5.60288,-189.375 0/1:53:40,13:40:1557:13:470:-26.6756,0,-123.759 0/1:54:48,6:48:1900:6:214:-3.3491,0,-154.961 0/1:79:72,7:72:2841:7:271:-0.972934,0,-232.031 0/0:110:110,0:110:4338:0:0:0,-33.1133,-390.382 0/0:71:69,2:69:2703:2:72:0,-14.5364,-236.57 dDocent_Contig_14087 99 . T C 1738.37 . AB=0.488;ABP=3.16665;AC=6;AF=0.5;AN=12;AO=61;CIGAR=1X;DP=125;DPB=125;DPRA=0;EPP=135.47;EPPR=133.434;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.442623;PAIREDR=0.671875;PAO=0;PQA=0;PQR=0;PRO=0;QA=2437;QR=2582;RO=64;RPL=61;RPP=135.47;RPPR=141.985;RPR=0;RUN=1;SAF=0;SAP=135.47;SAR=61;SRF=1;SRP=133.434;SRR=63;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:11:10,1:10:404:1:41:-0.783237,0,-33.4076 0/1:33:4,29:4:163:29:1165:-95.1934,0,-5.12444 0/1:17:9,8:9:363:8:317:-23.7763,0,-27.9166 0/1:18:10,8:10:404:8:304:-22.2877,0,-31.3013 0/1:22:13,9:13:524:9:365:-26.5924,0,-40.8842 0/1:24:18,6:18:724:6:245:-15.2048,0,-58.2602 dDocent_Contig_14089 171 . C G 37.5469 . AB=0.25;ABP=7.35324;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=114;DPB=114;DPRA=2;EPP=11.6962;EPPR=241.872;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.872727;PAO=0;PQA=0;PQR=0;PRO=0;QA=160;QR=4398;RO=110;RPL=4;RPP=11.6962;RPPR=241.872;RPR=0;RUN=1;SAF=0;SAP=11.6962;SAR=4;SRF=0;SRP=241.872;SRR=110;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:11:11,0:11:442:0:0:0,-3.31133,-40.1335 0/0:13:13,0:13:526:0:0:0,-3.91339,-47.6859 0/1:8:6,2:6:244:2:81:-5.27749,0,-19.9306 0/0:31:30,1:30:1197:1:41:0,-5.23736,-103.912 0/0:37:36,1:36:1423:1:38:0,-7.34084,-124.519 0/0:14:14,0:14:566:0:0:0,-4.21442,-51.2802 dDocent_Contig_14090 26 . A T 1802.12 . AB=0.467391;ABP=3.86001;AC=7;AF=0.583333;AN=12;AO=62;CIGAR=1X;DP=112;DPB=112;DPRA=0;EPP=137.642;EPPR=111.584;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.854839;PAIREDR=0.98;PAO=0;PQA=0;PQR=0;PRO=0;QA=2421;QR=2027;RO=50;RPL=0;RPP=137.642;RPPR=111.584;RPR=62;RUN=1;SAF=62;SAP=137.642;SAR=0;SRF=50;SRP=111.584;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:9:8,1:8:326:1:41:-1.3853,0,-27.0006 0/1:26:10,16:10:410:16:601:-46.5782,0,-29.4338 0/1:15:13,2:13:520:2:82:-3.26423,0,-42.6313 0/1:21:16,5:16:648:5:200:-12.0568,0,-52.3295 0/1:21:2,19:2:82:19:757:-62.1274,0,-1.45805 1/1:20:1,19:1:41:19:740:-62.8248,-1.92603,0 dDocent_Contig_14091 58 . A C 153.766 . AB=0.162162;ABP=76.3709;AC=4;AF=0.333333;AN=12;AO=12;CIGAR=1X;DP=107;DPB=107;DPRA=1.12121;EPP=29.068;EPPR=209.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=0.916667;PAIREDR=0.884211;PAO=0;PQA=0;PQR=0;PRO=0;QA=481;QR=3764;RO=95;RPL=12;RPP=29.068;RPPR=209.3;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=95;SRP=209.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:18:18,0:18:698:0:0:0,-5.41854,-63.1431 0/1:5:4,1:4:159:1:40:-2.49053,0,-13.1868 0/1:17:13,4:13:523:4:163:-9.94092,0,-42.2994 0/0:15:15,0:15:602:0:0:0,-4.51545,-54.5187 0/1:27:24,3:24:966:3:116:-2.68921,0,-79.1099 0/1:25:21,4:21:816:4:162:-7.44121,0,-66.2239 dDocent_Contig_14092 152 . C A 118.986 . AB=0.294118;ABP=9.26925;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=114;DPB=114;DPRA=0.876289;EPP=13.8677;EPPR=237.529;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=200;QR=4196;RO=108;RPL=0;RPP=13.8677;RPPR=237.529;RPR=5;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=0;SRP=237.529;SRR=108;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:6:6,0:6:214:0:0:0,-1.80618,-19.5953 0/0:33:33,0:33:1317:0:0:0,-9.93399,-118.791 0/0:25:25,0:25:942:0:0:0,-7.52575,-85.0678 0/0:28:28,0:28:1090:0:0:0,-8.42884,-98.3881 0/0:5:5,0:5:203:0:0:0,-1.50515,-18.6531 0/1:17:11,5:11:430:5:200:-13.4215,0,-34.1139 dDocent_Contig_14093 135 . A G 1874.22 . AB=0.245763;ABP=69.2586;AC=6;AF=0.5;AN=12;AO=58;CIGAR=2X;DP=149;DPB=149;DPRA=0;EPP=128.956;EPPR=155.013;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2230;QR=2681;RO=70;RPL=0;RPP=128.956;RPPR=155.013;RPR=58;RUN=1;SAF=0;SAP=128.956;SAR=58;SRF=0;SRP=155.013;SRR=70;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:31:18,8,5:18:695:8,5:294,195:-18.5929,0,-54.6558,-7.97628,-41.0367,-63.5511 0|1:14:10,3,1:10:359:3,1:121,40:-6.96642,0,-28.3328,-6.68246,-25.9371,-35.6205 1|0:4:0,1,3:0:0:1,3:40,118:-13.3964,-10.0996,-9.7986,-3.69465,0,-2.79156 0|0:39:22,5,12:22:842:5,12:195,466:-31.6638,-22.2572,-89.8349,0,-53.0505,-65.4682 0|1:30:18,12,0:18:703:12,0:453,0:-32.0787,0,-54.5657,-37.4972,-58.1781,-95.2929 1|1:31:2,29,0:2:82:29,0:1127,0:-93.9343,-1.55225,0,-94.5364,-8.72987,-101.306 dDocent_Contig_14094 39 . G C 691.428 . AB=0.150327;ABP=327.993;AC=5;AF=0.416667;AN=12;AO=49;CIGAR=1X;DP=422;DPB=422;DPRA=0;EPP=109.412;EPPR=812.97;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.959184;PAIREDR=0.978552;PAO=0;PQA=0;PQR=0;PRO=0;QA=1996;QR=14874;RO=373;RPL=0;RPP=109.412;RPPR=812.97;RPR=49;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=373;SRP=812.97;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:63:54,9:54:2126:9:368:-14.5205,0,-172.56 0/1:49:44,5:44:1779:5:204:-3.99356,0,-145.569 0/1:30:21,9:21:844:9:367:-24.3644,0,-67.2415 0/1:36:29,7:29:1162:7:282:-14.915,0,-94.0199 0/1:128:112,16:112:4469:16:653:-20.5705,0,-363.596 0/0:116:113,3:113:4494:3:122:0,-23.547,-393.02 dDocent_Contig_14096 1 . N A 43.2086 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=23;MQMR=0;NS=1;NUMALT=1;ODDS=5.99146;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=70;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:70:-4.31976,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_14098 13 . G A 96.8923 . AB=0.159091;ABP=47.4268;AC=2;AF=0.166667;AN=12;AO=8;CIGAR=1X;DP=135;DPB=135;DPRA=0.776316;EPP=20.3821;EPPR=278.787;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.5;PAIREDR=0.850394;PAO=0;PQA=0;PQR=0;PRO=0;QA=320;QR=5141;RO=127;RPL=0;RPP=20.3821;RPPR=278.787;RPR=8;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=127;SRP=278.787;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1137:0:0:0,-8.42884,-102.608 0/0:15:14,1:14:560:1:38:0,-0.718181,-46.9434 0/1:13:10,3:10:406:3:123:-7.5514,0,-32.9866 0/1:31:27,4:27:1095:4:159:-5.35951,0,-89.502 0/0:29:29,0:29:1166:0:0:0,-8.72987,-105.22 0/0:19:19,0:19:777:0:0:0,-5.71957,-70.2475 dDocent_Contig_14099 48 . A T 458.125 . AB=0.15847;ABP=188.416;AC=3;AF=0.25;AN=12;AO=31;CIGAR=1X;DP=325;DPB=325;DPRA=1.14141;EPP=70.3259;EPPR=615.631;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.935484;PAIREDR=0.955782;PAO=0;PQA=0;PQR=0;PRO=0;QA=1249;QR=11733;RO=294;RPL=0;RPP=70.3259;RPPR=615.631;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=294;SRP=641.423;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:56:56,0:56:2225:0:0:0,-16.8577,-200.417 0/1:77:70,7:70:2835:7:285:-2.8451,0,-232.063 0/1:67:57,10:57:2261:10:402:-16.3693,0,-183.479 0/0:43:41,2:41:1641:2:82:0,-5.16461,-140.136 0/1:39:27,12:27:1061:12:480:-31.8098,0,-84.0433 0/0:43:43,0:43:1710:0:0:0,-12.9443,-154.127 dDocent_Contig_14100 29 . C T 448.416 . AB=0.285714;ABP=30.9292;AC=1;AF=0.0833333;AN=12;AO=20;CIGAR=1X;DP=587;DPB=587;DPRA=0.676983;EPP=46.4397;EPPR=1234.24;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.992945;PAO=0;PQA=0;PQR=0;PRO=0;QA=746;QR=22629;RO=567;RPL=0;RPP=46.4397;RPPR=1234.24;RPR=20;RUN=1;SAF=20;SAP=46.4397;SAR=0;SRF=567;SRP=1234.24;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:113:113,0:113:4544:0:0:0,-34.0164,-408.877 0/0:145:145,0:145:5755:0:0:0,-43.6493,-517.747 0/0:63:63,0:63:2516:0:0:0,-18.9649,-226.574 0/0:77:77,0:77:3089:0:0:0,-23.1793,-278.084 0/1:70:50,20:50:2029:20:746:-46.3645,0,-161.719 0/0:119:119,0:119:4696:0:0:0,-35.8226,-422.547 dDocent_Contig_14101 24 . A G 42.4213 . AB=0.104478;ABP=94.0501;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=528;DPB=528;DPRA=0.726681;EPP=18.2106;EPPR=1134.35;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9942;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.21881;PAO=0;PQA=0;PQR=0;PRO=0;QA=284;QR=20730;RO=521;RPL=0;RPP=18.2106;RPPR=1134.35;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=521;SRP=1134.35;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:177:177,0:177:7070:0:0:0,-53.2823,-635.966 0/0:159:159,0:159:6321:0:0:0,-47.8638,-568.648 0/1:67:60,7:60:2393:7:284:-5.76498,0,-195.339 0/0:83:83,0:83:3258:0:0:0,-24.9855,-293.295 0/0:30:30,0:30:1205:0:0:0,-9.0309,-108.724 0/0:12:12,0:12:483:0:0:0,-3.61236,-43.8222 dDocent_Contig_14102 18 . A G 1081.77 . AB=0.311594;ABP=45.5586;AC=4;AF=0.333333;AN=12;AO=44;CIGAR=1X;DP=210;DPB=210;DPRA=0.905263;EPP=98.5551;EPPR=363.475;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.636364;PAIREDR=0.566265;PAO=0;PQA=0;PQR=0;PRO=0;QA=1765;QR=6584;RO=166;RPL=0;RPP=98.5551;RPPR=363.475;RPR=44;RUN=1;SAF=44;SAP=98.5551;SAR=0;SRF=166;SRP=363.475;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:34:33,1:33:1309:1:37:0,-6.53719,-114.38 0/0:38:38,0:38:1522:0:0:0,-11.4391,-137.223 0/1:38:29,9:29:1151:9:358:-21.1436,0,-92.4308 0/1:36:26,10:26:997:10:399:-25.4302,0,-79.1851 0/1:41:29,12:29:1161:12:483:-31.477,0,-92.4274 0/1:23:11,12:11:444:12:488:-37.3478,0,-33.3927 dDocent_Contig_14103 24 . T A 58.1536 . AB=0.222222;ABP=15.074;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=146;DPB=146;DPRA=0.703125;EPP=11.6962;EPPR=311.359;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.366197;PAO=0;PQA=0;PQR=0;PRO=0;QA=138;QR=5605;RO=142;RPL=0;RPP=11.6962;RPPR=311.359;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=142;SRP=311.359;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:28:28,0:28:1086:0:0:0,-8.42884,-98.0162 0/0:24:24,0:24:957:0:0:0,-7.22472,-86.4297 0/0:10:10,0:10:402:0:0:0,-3.0103,-36.5383 0/0:38:38,0:38:1517:0:0:0,-11.4391,-136.771 0/0:28:28,0:28:1110:0:0:0,-8.42884,-100.183 0/1:18:14,4:14:533:4:138:-7.33824,0,-42.8752 dDocent_Contig_14105 27 . G A 2839.49 . AB=0.0283019;ABP=1232.15;AC=0;AF=0;AN=12;AO=18;CIGAR=1X3M1X;DP=938;DPB=938;DPRA=0;EPP=42.0968;EPPR=1555.61;GTI=0;LEN=1;MEANALT=5.75;MQM=60;MQMR=59.8895;NS=6;NUMALT=2;ODDS=0;PAIRED=0.388889;PAIREDR=0.373427;PAO=0;PQA=0;PQR=0;PRO=0;QA=666;QR=26842;RO=715;RPL=0;RPP=42.0968;RPPR=1555.61;RPR=18;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=715;SRP=1555.61;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:135:105,7,17:105:3968:7,17:258,664:-22.9854,-33.504,-356.609,0,-304.13,-320.106 0|0:176:122,6,26:122:4520:6,26:213,1009:-46.1893,-65.5675,-432.895,0,-351.796,-361.319 0|0:133:100,1,27:100:3804:1,27:40,1058:-56.8916,-83.6993,-395.37,0,-308.676,-303.843 0|0:192:143,4,37:143:5326:4,37:155,1452:-76.3722,-106.686,-540.775,0,-422.56,-424.156 0|0:175:142,0,31:142:5374:0,31:0,1222:-57.7843,-100.531,-541.042,0,-440.503,-431.172 0|0:127:103,0,21:103:3850:0,21:0,804:-34.9477,-65.9538,-381.139,0,-315.166,-308.844 dDocent_Contig_14106 15 . A G 47.1401 . AB=0.137931;ABP=36.0317;AC=1;AF=0.0833333;AN=12;AO=7;CIGAR=1X;DP=183;DPB=183;DPRA=1.32727;EPP=18.2106;EPPR=385.189;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.142857;PAIREDR=0.426136;PAO=0;PQA=0;PQR=0;PRO=0;QA=282;QR=7025;RO=176;RPL=0;RPP=18.2106;RPPR=385.189;RPR=7;RUN=1;SAF=7;SAP=18.2106;SAR=0;SRF=176;SRP=385.189;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:23:23,0:23:919:0:0:0,-6.92369,-83.0151 0/0:31:31,0:31:1217:0:0:0,-9.33193,-109.807 0/0:27:27,0:27:1063:0:0:0,-8.12781,-95.9622 0/0:29:29,0:29:1175:0:0:0,-8.72987,-106.026 0/1:29:25,4:25:999:4:162:-6.23688,0,-81.4779 0/0:44:41,3:41:1652:3:120:0,-2.05763,-137.72 dDocent_Contig_14107 11 . G A 2772.44 . AB=0.609544;ABP=51.0606;AC=7;AF=0.583333;AN=12;AO=287;CIGAR=1X;DP=467;DPB=467;DPRA=0;EPP=575.197;EPPR=391.704;GTI=0;LEN=1;MEANALT=1.16667;MQM=16.6864;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.569832;PAO=0;PQA=0;PQR=0;PRO=0;QA=11415;QR=7091;RO=179;RPL=0;RPP=626.223;RPPR=391.704;RPR=287;RUN=1;SAF=281;SAP=575.197;SAR=6;SRF=179;SRP=391.704;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:80:42,38:42:1653:38:1502:-28.7093,0,-124.917 0/1:193:53,139:53:2121:139:5503:-136.53,0,-133.145 0/1:87:53,34:53:2110:34:1369:-27.3982,0,-163.892 0/1:77:27,50:27:1044:50:2016:-50.1652,0,-71.0655 1/1:6:0,6:0:0:6:223:-15.8457,-1.80618,0 0/1:24:4,20:4:163:20:802:-27.8174,0,-7.83371 dDocent_Contig_14108 13 . C T 6098.18 . AB=0.365422;ABP=83.0817;AC=7;AF=0.583333;AN=12;AO=237;CIGAR=1X;DP=560;DPB=560;DPRA=0;EPP=517.649;EPPR=704.396;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.970464;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8562;QR=12757;RO=323;RPL=0;RPP=517.649;RPPR=704.396;RPR=237;RUN=1;SAF=237;SAP=517.649;SAR=0;SRF=323;SRP=704.396;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:88:41,47:41:1569:47:1694:-126.245,0,-114.949 0/1:161:111,50:111:4383:50:1763:-110.461,0,-345.975 0/1:97:81,16:81:3204:16:593:-24.5056,0,-259.23 0/1:111:67,44:67:2678:44:1610:-111.752,0,-207.724 0/1:52:23,29:23:923:29:1024:-76.8032,0,-67.7212 1/1:51:0,51:0:0:51:1878:-169.273,-15.3525,0 dDocent_Contig_14109 8 . A G 269.056 . AB=0.149254;ABP=146.198;AC=2;AF=0.166667;AN=12;AO=22;CIGAR=1X;DP=242;DPB=242;DPRA=2.36111;EPP=50.7827;EPPR=480.734;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.995455;PAO=0;PQA=0;PQR=0;PRO=0;QA=853;QR=8404;RO=220;RPL=0;RPP=50.7827;RPPR=480.734;RPR=22;RUN=1;SAF=22;SAP=50.7827;SAR=0;SRF=220;SRP=480.734;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:26,0:26:998:0:0:0,-7.82678,-90.1317 0/0:21:21,0:21:802:0:0:0,-6.32163,-72.5046 0/1:74:65,9:65:2499:9:349:-9.49454,0,-202.836 0/0:25:25,0:25:956:0:0:0,-7.52575,-86.3544 0/1:60:49,11:49:1863:11:426:-20.6329,0,-149.861 0/0:36:34,2:34:1286:2:78:0,-3.43361,-108.623 dDocent_Contig_14110 19 . A G 303.867 . AB=0.143791;ABP=171.633;AC=3;AF=0.25;AN=12;AO=26;CIGAR=1X;DP=280;DPB=280;DPRA=1.01739;EPP=59.4686;EPPR=554.564;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.846154;PAIREDR=0.917323;PAO=0;PQA=0;PQR=0;PRO=0;QA=1033;QR=10115;RO=254;RPL=0;RPP=59.4686;RPPR=554.564;RPR=26;RUN=1;SAF=26;SAP=59.4686;SAR=0;SRF=254;SRP=554.564;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:41:34,7:34:1364:7:266:-11.9566,0,-110.672 0/0:44:41,3:41:1647:3:119:0,-2.15031,-137.361 0/1:62:51,11:51:2023:11:444:-21.6512,0,-163.597 0/1:50:46,4:46:1813:4:163:-0.00692765,0,-148.332 0/0:37:36,1:36:1431:1:41:0,-7.04354,-124.952 0/0:46:46,0:46:1837:0:0:0,-13.8474,-165.537 dDocent_Contig_14111 22 . G A 829.22 . AB=0.185606;ABP=229.666;AC=5;AF=0.416667;AN=12;AO=49;CIGAR=1X;DP=280;DPB=280;DPRA=3.3;EPP=109.412;EPPR=504.62;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1887;QR=9036;RO=231;RPL=0;RPP=109.412;RPPR=504.62;RPR=49;RUN=1;SAF=49;SAP=109.412;SAR=0;SRF=231;SRP=504.62;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:44:28,16:28:1099:16:606:-41.6257,0,-85.9487 0/1:51:42,9:42:1617:9:362:-17.5915,0,-130.408 0/1:30:24,6:24:967:6:218:-10.9324,0,-78.2996 0/1:99:85,14:85:3317:14:545:-19.5905,0,-268.801 0/0:16:16,0:16:637:0:0:0,-4.81648,-57.6645 0/1:40:36,4:36:1399:4:156:-2.3743,0,-114.115 dDocent_Contig_14112 15 . A T 64.1159 . AB=0.142857;ABP=41.7866;AC=1;AF=0.0833333;AN=12;AO=5;CIGAR=1X;DP=254;DPB=254;DPRA=0.799087;EPP=13.8677;EPPR=543.707;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=0.6;PAIREDR=0.353414;PAO=0;PQA=0;PQR=0;PRO=0;QA=201;QR=9902;RO=249;RPL=0;RPP=13.8677;RPPR=543.707;RPR=5;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=249;SRP=543.707;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:35:35,0:35:1389:0:0:0,-10.536,-125.269 0/1:35:30,5:30:1188:5:201:-7.93447,0,-96.6666 0/0:52:52,0:52:2076:0:0:0,-15.6536,-187.022 0/0:45:45,0:45:1800:0:0:0,-13.5463,-162.212 0/0:38:38,0:38:1514:0:0:0,-11.4391,-136.505 0/0:49:49,0:49:1935:0:0:0,-14.7505,-174.345 dDocent_Contig_14113 11 . C A 714.674 . AB=0.279412;ABP=31.7504;AC=6;AF=0.5;AN=12;AO=27;CIGAR=1X;DP=112;DPB=112;DPRA=0.422222;EPP=61.6401;EPPR=187.585;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1080;QR=3417;RO=85;RPL=0;RPP=61.6401;RPPR=187.585;RPR=27;RUN=1;SAF=27;SAP=61.6401;SAR=0;SRF=85;SRP=187.585;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:17,2:17:682:2:82:-2.06011,0,-55.9919 1/1:8:0,8:0:0:8:318:-28.9863,-2.40824,0 0/1:16:7,9:7:282:9:356:-27.5834,0,-20.9356 0/1:22:17,5:17:686:5:202:-11.9394,0,-55.4426 0/0:36:36,0:36:1445:0:0:0,-10.8371,-130.296 0/1:11:8,3:8:322:3:122:-8.06116,0,-26.0368 dDocent_Contig_14114 11 . C A 57.0088 . AB=0;ABP=0;AC=4;AF=0.333333;AN=12;AO=3;CIGAR=3M1X2M;DP=50;DPB=48;DPRA=0.1125;EPP=9.52472;EPPR=98.5551;GTI=0;LEN=1;MEANALT=1;MQM=12;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=36;QR=1726;RO=44;RPL=0;RPP=9.52472;RPPR=98.5551;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=44;SRP=98.5551;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:7:5,2,0:5:199:2,0:67,0:-4.25389,0,-16.1817,-5.75904,-16.7838,-22.1901 0|0:14:14,0,0:14:553:0,0:0,0:0,-4.21442,-50.1154,-4.21442,-50.1154,-50.1154 0|0:14:13,1,0:13:505:1,0:29,0:0,-1.31511,-42.8952,-3.91339,-43.1963,-45.4976 0|0:12:12,0,0:12:469:0,0:0,0:0,-3.61236,-42.5599,-3.61236,-42.5599,-42.5599 1|1:2:0,0,2:0:0:0,2:0,24:-1.73449,-1.73449,-1.73449,-0.60206,-0.60206,0 1|1:1:0,0,1:0:0:0,1:0,12:-0.912892,-0.912892,-0.912892,-0.30103,-0.30103,0 dDocent_Contig_14115 31 . C T 1490.56 . AB=0.210332;ABP=200.518;AC=6;AF=0.5;AN=12;AO=57;CIGAR=1X1M1X;DP=271;DPB=271;DPRA=0;EPP=126.784;EPPR=402.561;GTI=0;LEN=1;MEANALT=2.16667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=0.859649;PAIREDR=0.195652;PAO=0;PQA=0;PQR=0;PRO=0;QA=2205;QR=7295;RO=184;RPL=0;RPP=126.784;RPPR=402.561;RPR=57;RUN=1;SAF=57;SAP=126.784;SAR=0;SRF=184;SRP=402.561;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:23:8,2,13:8:322:2,13:79,505:-39.0811,-34.9879,-60.9296,0,-20.0453,-22.631 0|1:21:11,2,8:11:443:2,8:81,316:-22.6844,-19.3146,-55.2295,0,-29.8311,-34.1023 0|1:44:32,1,11:32:1266:1,11:40,423:-25.0762,-31.4128,-135.303,0,-100.884,-100.867 0|1:24:6,3,14:6:228:3,14:121,546:-43.0623,-34.8921,-52.6763,0,-8.69641,-14.4624 0|1:69:51,11,7:51:2035:11,7:433,274:-20.2689,0,-164.291,-13.0946,-145.076,-178.587 0|1:90:76,10,4:76:3001:10,4:400,141:-10.1046,0,-243.947,-21.52,-235.483,-267.229 dDocent_Contig_14116 98 . N C 83.3695 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=83;QR=0;RO=0;RPL=3;RPP=9.52472;RPPR=0;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 1/1:1:0,1:0:0:1:30:-2.99957,-0.30103,0 ./.:.:.:.:.:.:.:. 1/1:2:0,2:0:0:2:53:-5.03451,-0.60206,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_14117 56 . C T 137.615 . AB=0.131868;ABP=110.128;AC=3;AF=0.25;AN=12;AO=14;CIGAR=1X;DP=146;DPB=146;DPRA=2.01724;EPP=33.4109;EPPR=289.645;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=565;QR=5263;RO=132;RPL=14;RPP=33.4109;RPPR=289.645;RPR=0;RUN=1;SAF=14;SAP=33.4109;SAR=0;SRF=132;SRP=289.645;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:26:24,2:24:959:2:82:0,-0.0471021,-78.8306 0/1:25:23,2:23:897:2:82:-0.253928,0,-73.5112 0/1:34:28,6:28:1115:6:238:-11.556,0,-90.4014 0/0:11:11,0:11:449:0:0:0,-3.31133,-40.7659 0/1:32:28,4:28:1116:4:163:-5.42547,0,-91.0918 0/0:18:18,0:18:727:0:0:0,-5.41854,-65.7562 dDocent_Contig_14118 26 . T A 534.437 . AB=0.421053;ABP=4.03889;AC=3;AF=0.25;AN=12;AO=17;CIGAR=1X;DP=142;DPB=142;DPRA=0.491228;EPP=39.9253;EPPR=274.444;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=663;QR=4743;RO=125;RPL=0;RPP=39.9253;RPPR=274.444;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=125;SRP=274.444;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:37:37,0:37:1403:0:0:0,-11.1381,-126.548 0/0:41:41,0:41:1529:0:0:0,-12.3422,-137.868 0/0:16:16,0:16:621:0:0:0,-4.81648,-56.2278 0/0:20:20,0:20:765:0:0:0,-6.0206,-69.1686 1/1:9:0,9:0:0:9:354:-32.2163,-2.70927,0 0/1:19:11,8:11:425:8:309:-22.4493,0,-32.884 dDocent_Contig_14119 170 . G A 525.029 . AB=0;ABP=0;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=402;DPB=402;DPRA=2.1875;EPP=39.9253;EPPR=839.027;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=610;QR=15100;RO=385;RPL=17;RPP=39.9253;RPPR=839.027;RPR=0;RUN=1;SAF=0;SAP=39.9253;SAR=17;SRF=0;SRP=839.027;SRR=385;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:15:0,15:0:0:15:571:-51.7247,-4.51545,0 0/0:5:5,0:5:201:0:0:0,-1.50515,-18.4705 0/0:4:4,0:4:162:0:0:0,-1.20412,-14.967 0/0:36:36,0:36:1388:0:0:0,-10.8371,-125.168 0/0:147:147,0:147:5716:0:0:0,-44.2514,-514.277 0/0:195:193,2:193:7633:2:39:0,-54.9963,-682.885 dDocent_Contig_14120 20 . C A 84.0265 . AB=0.285714;ABP=8.59409;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=1X;DP=206;DPB=206;DPRA=0.364583;EPP=11.6962;EPPR=441.648;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.25;PAIREDR=0.648515;PAO=0;PQA=0;PQR=0;PRO=0;QA=153;QR=7945;RO=202;RPL=0;RPP=11.6962;RPPR=441.648;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=202;SRP=441.648;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:49:49,0:49:1924:0:0:0,-14.7505,-173.375 0/0:36:36,0:36:1419:0:0:0,-10.8371,-127.964 0/1:14:10,4:10:391:4:153:-9.92552,0,-31.3296 0/0:22:22,0:22:868:0:0:0,-6.62266,-78.4311 0/0:38:38,0:38:1487:0:0:0,-11.4391,-134.077 0/0:47:47,0:47:1856:0:0:0,-14.1484,-167.254 dDocent_Contig_14121 14 . C A 301.741 . AB=0.555556;ABP=3.49285;AC=1;AF=0.125;AN=8;AO=10;CIGAR=1X;DP=81;DPB=81;DPRA=0.857143;EPP=24.725;EPPR=157.185;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=4;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.985915;PAO=0;PQA=0;PQR=0;PRO=0;QA=407;QR=2829;RO=71;RPL=0;RPP=24.725;RPPR=157.185;RPR=10;RUN=1;SAF=10;SAP=24.725;SAR=0;SRF=71;SRP=157.185;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. 0/1:18:8,10:8:318:10:407:-31.5721,0,-23.5673 0/0:19:19,0:19:768:0:0:0,-5.71957,-69.4391 ./.:.:.:.:.:.:.:. 0/0:18:18,0:18:702:0:0:0,-5.41854,-63.5018 0/0:26:26,0:26:1041:0:0:0,-7.82678,-93.9825 dDocent_Contig_14122 15 . C T 826.78 . AB=0.407895;ABP=8.61041;AC=3;AF=0.3;AN=10;AO=31;CIGAR=1X;DP=126;DPB=126;DPRA=1.01333;EPP=70.3259;EPPR=209.3;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.978947;PAO=0;PQA=0;PQR=0;PRO=0;QA=1220;QR=3775;RO=95;RPL=0;RPP=70.3259;RPPR=209.3;RPR=31;RUN=1;SAF=31;SAP=70.3259;SAR=0;SRF=95;SRP=209.3;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:32:16,16:16:624:16:622:-46.6738,0,-46.8599 0/0:33:33,0:33:1324:0:0:0,-9.93399,-119.421 0/1:27:19,8:19:774:8:327:-21.6723,0,-61.8511 0/1:17:10,7:10:378:7:271:-19.633,0,-29.2501 ./.:.:.:.:.:.:.:. 0/0:17:17,0:17:675:0:0:0,-5.11751,-61.0764 dDocent_Contig_14124 123 . A G 162.41 . AB=0.263158;ABP=21.525;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X1M1X;DP=111;DPB=111;DPRA=1.05556;EPP=26.8965;EPPR=217.986;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=371;QR=3317;RO=99;RPL=0;RPP=26.8965;RPPR=217.986;RPR=11;RUN=1;SAF=0;SAP=26.8965;SAR=11;SRF=0;SRP=217.986;SRR=99;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:28:27,0:27:901:0:0:0,-8.12781,-81.2893 0|1:24:19,5:19:651:5:169:-8.3181,0,-51.6878 0|1:14:9,5:9:308:5:167:-11.1447,0,-23.8383 0|0:19:18,1:18:592:1:35:0,-2.22094,-50.0925 0|0:22:22,0:22:731:0:0:0,-6.62266,-66.1018 0|0:4:4,0:4:134:0:0:0,-1.20412,-12.3913 dDocent_Contig_14125 8 . A C 127.72 . AB=0.142857;ABP=88.3181;AC=2;AF=0.166667;AN=12;AO=17;CIGAR=1X;DP=332;DPB=332;DPRA=1.15584;EPP=39.9253;EPPR=687.024;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.952381;PAO=0;PQA=0;PQR=0;PRO=0;QA=661;QR=12016;RO=315;RPL=0;RPP=39.9253;RPPR=687.024;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=315;SRP=687.024;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:32:32,0:32:1217:0:0:0,-9.63296,-109.823 0/1:49:43,6:43:1650:6:232:-6.49846,0,-134.012 0/0:23:23,0:23:856:0:0:0,-6.92369,-77.3541 0/1:28:23,5:23:886:5:195:-9.49536,0,-71.6299 0/0:101:95,6:95:3656:6:234:0,-8.97292,-307.724 0/0:99:99,0:99:3751:0:0:0,-29.802,-337.7 dDocent_Contig_14126 62 . T G 1772.27 . AB=0.510204;ABP=3.14325;AC=6;AF=0.5;AN=12;AO=75;CIGAR=2X3M2X;DP=147;DPB=147;DPRA=0;EPP=165.871;EPPR=157.185;GTI=0;LEN=1;MEANALT=1.16667;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.84;PAIREDR=0.859155;PAO=0;PQA=0;PQR=0;PRO=0;QA=2562;QR=2528;RO=71;RPL=75;RPP=165.871;RPPR=157.185;RPR=0;RUN=1;SAF=75;SAP=165.871;SAR=0;SRF=71;SRP=157.185;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:16:9,7:9:306:7:234:-16.571,0,-23.0522 0|1:17:7,10:7:236:10:331:-24.9948,0,-16.4511 0|1:20:8,12:8:291:12:431:-33.1099,0,-20.5193 0|1:32:22,10:22:787:10:349:-22.1129,0,-61.5177 0|1:27:9,17:9:329:17:566:-43.2864,0,-21.9791 0|1:35:16,19:16:579:19:651:-48.3744,0,-41.9084 dDocent_Contig_14127 89 . T A 277.802 . AB=0.733333;ABP=10.1038;AC=1;AF=0.1;AN=10;AO=12;CIGAR=1X;DP=143;DPB=143;DPRA=1.70149;EPP=29.068;EPPR=287.473;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=5;NUMALT=1;ODDS=1.73472e-18;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=408;QR=4375;RO=131;RPL=12;RPP=29.068;RPPR=287.473;RPR=0;RUN=1;SAF=12;SAP=29.068;SAR=0;SRF=131;SRP=287.473;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:474:0:0:0,-4.21442,-42.9836 0/1:15:4,11:4:136:11:373:-29.3823,0,-8.06052 0/0:37:37,0:37:1246:0:0:0,-11.1381,-112.439 0/0:61:60,1:60:1979:1:35:0,-14.8642,-174.884 0/0:16:16,0:16:540:0:0:0,-4.81648,-48.9213 ./.:.:.:.:.:.:.:. dDocent_Contig_14128 71 . C T 729.566 . AB=0.0526316;ABP=69.0688;AC=0;AF=0;AN=8;AO=2;CIGAR=12M1X;DP=76;DPB=78.6154;DPRA=0;EPP=7.35324;EPPR=89.8692;GTI=0;LEN=1;MEANALT=5;MQM=60;MQMR=60;NS=4;NUMALT=2;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=70;QR=1406;RO=40;RPL=2;RPP=7.35324;RPPR=89.8692;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=40;SRP=89.8692;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:14:11,3,0:11:389:3,0:112,0:-6.23166,0,-31.1328,-9.54299,-32.0359,-41.21 0|0:38:18,15,2:18:620:15,2:526,70:-37.4388,0,-45.8983,-37.1598,-44.7162,-86.9226 0|0:11:5,6,0:5:183:6,0:216,0:-16.4775,0,-13.5152,-17.9826,-15.3214,-32.941 0|0:13:6,7,0:6:214:7,0:264,0:-20.2065,0,-15.6936,-22.0127,-17.8008,-39.4475 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_14129 54 . A T 75.7723 . AB=0.108911;ABP=137.19;AC=2;AF=0.166667;AN=12;AO=11;CIGAR=1X;DP=272;DPB=272;DPRA=1.18129;EPP=26.8965;EPPR=558.941;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.992308;PAO=0;PQA=0;PQR=0;PRO=0;QA=435;QR=10308;RO=260;RPL=11;RPP=26.8965;RPPR=567.593;RPR=0;RUN=1;SAF=11;SAP=26.8965;SAR=0;SRF=259;SRP=558.941;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:23:21,2:21:813:2:77:-0.38451,0,-66.5578 0/0:44:44,0:44:1768:0:0:0,-13.2453,-159.331 0/1:78:69,9:69:2723:9:358:-9.09835,0,-221.712 0/0:39:38,0:38:1521:0:0:0,-11.4391,-136.85 0/0:48:48,0:48:1871:0:0:0,-14.4494,-168.595 0/0:40:40,0:40:1612:0:0:0,-12.0412,-145.309 dDocent_Contig_14131 9 . A G 209.159 . AB=0.290323;ABP=14.8483;AC=1;AF=0.0833333;AN=12;AO=17;CIGAR=1X;DP=401;DPB=401;DPRA=2.22105;EPP=39.9253;EPPR=836.856;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=655;QR=14614;RO=384;RPL=0;RPP=39.9253;RPPR=836.856;RPR=17;RUN=1;SAF=17;SAP=39.9253;SAR=0;SRF=384;SRP=836.856;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:46:46,0:46:1743:0:0:0,-13.8474,-157.13 0/0:80:80,0:80:3022:0:0:0,-24.0824,-272.144 0/0:24:24,0:24:921:0:0:0,-7.22472,-83.2075 0/0:40:40,0:40:1535:0:0:0,-12.0412,-138.42 0/0:180:172,8:172:6567:8:306:0,-26.2845,-563.044 0/1:31:22,9:22:826:9:349:-22.4388,0,-65.3262 dDocent_Contig_14132 12 . T A 1028.79 . AB=0.377778;ABP=8.84915;AC=1;AF=0.0833333;AN=12;AO=21;CIGAR=2M1X1M;DP=166;DPB=150.5;DPRA=0;EPP=48.6112;EPPR=250.558;GTI=0;LEN=1;MEANALT=1.66667;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=2.77556e-17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=838;QR=4469;RO=114;RPL=0;RPP=48.6112;RPPR=250.558;RPR=21;RUN=1;SAF=21;SAP=48.6112;SAR=0;SRF=114;SRP=250.558;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:24:17,7,0:17:676:7,0:240,0:-14.7047,0,-53.9469,-19.8223,-56.0541,-75.5178 0|0:17:10,7,0:10:378:7,0:262,0:-18.8197,0,-29.2516,-21.83,-31.3588,-52.8133 0|0:18:9,7,2:9:363:7,2:268,82:-19.2638,0,-27.8099,-15.1989,-23.1478,-44.5308 0|0:28:22,6,0:22:855:6,0:233,0:-12.9112,0,-68.836,-19.5339,-70.6422,-89.788 0|0:52:48,0,4:48:1879:0,4:0,163:0,-14.4494,-168.922,-0.595132,-155.474,-154.269 0|1:27:8,4,15:8:318:4,15:153,593:-46.4014,-36.2571,-61.2352,0,-13.6411,-21.676 dDocent_Contig_14133 29 . T G 279.921 . AB=0.117647;ABP=326.815;AC=3;AF=0.25;AN=12;AO=38;CIGAR=1X;DP=681;DPB=681;DPRA=0.569492;EPP=85.5263;EPPR=1399.27;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.940902;PAO=0;PQA=0;PQR=0;PRO=0;QA=1535;QR=25765;RO=643;RPL=0;RPP=85.5263;RPPR=1399.27;RPR=38;RUN=1;SAF=38;SAP=85.5263;SAR=0;SRF=643;SRP=1399.27;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:123:112,11:112:4476:11:448:-3.64929,0,-365.739 0/1:93:82,11:82:3265:11:437:-11.6838,0,-265.913 0/1:39:31,8:31:1253:8:325:-17.8793,0,-101.296 0/0:114:108,6:108:4333:6:244:0,-11.9786,-367.563 0/0:177:177,0:177:7119:0:0:0,-53.2823,-640.347 0/0:135:133,2:133:5319:2:81:0,-32.9533,-470.858 dDocent_Contig_14134 12 . T A 1389.69 . AB=0.155556;ABP=49.3833;AC=1;AF=0.0833333;AN=12;AO=9;CIGAR=1X2M1I3M1X;DP=333;DPB=334.429;DPRA=0.421875;EPP=22.5536;EPPR=589.308;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.996296;PAO=0;PQA=0;PQR=0;PRO=0;QA=335;QR=10520;RO=270;RPL=0;RPP=22.5536;RPPR=589.308;RPR=9;RUN=1;SAF=9;SAP=22.5536;SAR=0;SRF=270;SRP=589.308;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:45:37,7,0:37:1441:7,0:258,0:-9.99177,0,-116.384,-21.1299,-118.492,-139.585 0|0:89:85,0,0:85:3284:0,0:0,0:0,-25.5875,-295.369,-25.5875,-295.369,-295.369 0|0:103:97,0,0:97:3812:0,0:0,0:0,-29.1999,-342.737,-29.1999,-342.737,-342.737 0|0:36:34,2,0:34:1329:2,0:77,0:0,-3.52794,-112.576,-10.235,-113.178,-119.5 0|0:32:9,0,23:9:337:0,23:0,892:-70.9393,-73.6486,-101.241,0,-27.9705,-21.0468 0|0:28:8,0,20:8:317:0,20:0,793:-63.2593,-65.6676,-91.7605,0,-26.4889,-20.4683 dDocent_Contig_14135 99 . N G 140.136 . AB=0;ABP=0;AC=4;AF=1;AN=4;AO=4;CIGAR=1M1I1M9X1I2X3M1X;DP=4;DPB=4.58824;DPRA=0;EPP=11.6962;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=56.25;MQMR=0;NS=2;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=145;QR=0;RO=0;RPL=0;RPP=11.6962;RPPR=0;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1|1:3:0,3:0:0:3:108:-10.0751,-0.90309,0 1|1:1:0,1:0:0:1:37:-3.63612,-0.30103,0 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. dDocent_Contig_14136 67 . C T 200.516 . AB=0.2;ABP=53.8228;AC=4;AF=0.333333;AN=12;AO=13;CIGAR=1X;DP=96;DPB=96;DPRA=1.04839;EPP=31.2394;EPPR=183.243;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.846154;PAIREDR=0.86747;PAO=0;PQA=0;PQR=0;PRO=0;QA=499;QR=3119;RO=83;RPL=13;RPP=31.2394;RPPR=183.243;RPR=0;RUN=1;SAF=13;SAP=31.2394;SAR=0;SRF=83;SRP=183.243;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:17:12,5:12:438:5:193:-12.6198,0,-34.6345 0/0:20:20,0:20:720:0:0:0,-6.0206,-65.1004 0/1:13:10,3:10:394:3:105:-5.87883,0,-31.9019 0/1:27:23,4:23:897:4:161:-6.74767,0,-72.9094 0/0:11:11,0:11:440:0:0:0,-3.31133,-39.9527 0/1:8:7,1:7:230:1:40:-1.58744,0,-18.6027 dDocent_Contig_14137 97 . C T 351.046 . AB=0.225806;ABP=43.4978;AC=6;AF=0.5;AN=12;AO=18;CIGAR=1X;DP=91;DPB=91;DPRA=1.32;EPP=42.0968;EPPR=161.528;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=618;QR=2539;RO=73;RPL=18;RPP=42.0968;RPPR=161.528;RPR=0;RUN=1;SAF=18;SAP=42.0968;SAR=0;SRF=73;SRP=161.528;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:14:14,0:14:481:0:0:0,-4.21442,-43.6182 0/1:18:13,5:13:439:5:170:-10.2162,0,-34.4158 0/0:11:11,0:11:384:0:0:0,-3.31133,-34.8951 0/1:44:35,9:35:1235:9:307:-14.7155,0,-98.2088 1/1:1:0,1:0:0:1:36:-3.59827,-0.30103,0 1/1:3:0,3:0:0:3:105:-9.79609,-0.90309,0 dDocent_Contig_14138 17 . C T 106.04 . AB=0.150943;ABP=59.0998;AC=1;AF=0.0833333;AN=12;AO=16;CIGAR=1X;DP=866;DPB=866;DPRA=1.04245;EPP=37.7539;EPPR=1848.76;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=613;QR=33601;RO=850;RPL=0;RPP=37.7539;RPPR=1848.76;RPR=16;RUN=1;SAF=16;SAP=37.7539;SAR=0;SRF=850;SRP=1848.76;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:89:82,7:82:3233:7:266:0,-2.48958,-266.756 0/0:65:65,0:65:2554:0:0:0,-19.5669,-230.012 0/1:53:45,8:45:1744:8:308:-12.1269,0,-141.224 0/0:63:63,0:63:2484:0:0:0,-18.9649,-223.715 0/0:296:296,0:296:11752:0:0:0,-89.1049,-1056.91 0/0:300:299,1:299:11834:1:39:0,-86.4124,-1060.38 dDocent_Contig_14139 1 . N G 109.108 . AB=0;ABP=0;AC=2;AF=1;AN=2;AO=3;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=9.52472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=0;NS=1;NUMALT=1;ODDS=6.68461;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=117;QR=0;RO=0;RPL=0;RPP=9.52472;RPPR=0;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. 1/1:3:0,3:0:0:3:117:-10.9102,-0.90309,0 ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. ./.:.:.:.:.:.:.:. dDocent_Contig_14140 20 . C T 285.678 . AB=0.285714;ABP=19.7617;AC=1;AF=0.0833333;AN=12;AO=15;CIGAR=1X;DP=265;DPB=265;DPRA=0.928177;EPP=35.5824;EPPR=545.878;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.733333;PAIREDR=0.52;PAO=0;PQA=0;PQR=0;PRO=0;QA=594;QR=9951;RO=250;RPL=0;RPP=35.5824;RPPR=545.878;RPR=15;RUN=1;SAF=15;SAP=35.5824;SAR=0;SRF=250;SRP=545.878;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:47:47,0:47:1833:0:0:0,-14.1484,-165.185 0/0:45:45,0:45:1817:0:0:0,-13.5463,-163.737 0/0:38:38,0:38:1498:0:0:0,-11.4391,-135.069 0/0:51:51,0:51:2036:0:0:0,-15.3525,-183.434 0/0:42:39,3:39:1561:3:123:0,-1.17847,-129.259 0/1:42:30,12:30:1206:12:471:-30.0907,0,-96.1725 dDocent_Contig_14141 12 . G A 661.495 . AB=0.285714;ABP=42.0968;AC=5;AF=0.416667;AN=12;AO=29;CIGAR=1X;DP=132;DPB=132;DPRA=0;EPP=65.983;EPPR=209.637;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=57.2913;NS=6;NUMALT=1;ODDS=0;PAIRED=0;PAIREDR=0.417476;PAO=0;PQA=0;PQR=0;PRO=0;QA=1180;QR=4030;RO=103;RPL=0;RPP=65.983;RPPR=226.672;RPR=29;RUN=1;SAF=29;SAP=65.983;SAR=0;SRF=101;SRP=209.637;SRR=2;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:19:15,4:15:591:4:164:-9.43033,0,-47.8084 0/0:34:33,1:33:1262:1:41:0,-6.14045,-108.45 0/1:37:25,12:25:990:12:489:-33.223,0,-76.2205 0/1:29:25,4:25:988:4:163:-6.32856,0,-77.9788 0/1:5:4,1:4:159:1:41:-2.58942,0,-13.1857 0/1:8:1,7:1:40:7:282:-23.3432,0,-1.58744 dDocent_Contig_14142 190 . A C 571.732 . AB=0.645161;ABP=8.68415;AC=2;AF=0.166667;AN=12;AO=20;CIGAR=1X;DP=57;DPB=57;DPRA=2.38462;EPP=46.4397;EPPR=83.3548;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=767;QR=1459;RO=37;RPL=20;RPP=46.4397;RPPR=83.3548;RPR=0;RUN=1;SAF=0;SAP=46.4397;SAR=20;SRF=0;SRP=83.3548;SRR=37;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:6:6,0:6:226:0:0:0,-1.80618,-20.6973 0/1:17:7,10:7:277:10:369:-28.4304,0,-20.1819 0/1:14:4,10:4:162:10:398:-31.9644,0,-10.7525 0/0:8:8,0:8:310:0:0:0,-2.40824,-28.2587 0/0:10:10,0:10:403:0:0:0,-3.0103,-36.6301 0/0:2:2,0:2:81:0:0:0,-0.60206,-7.68573 dDocent_Contig_14143 12 . C T 95.7337 . AB=0.181818;ABP=32.0291;AC=1;AF=0.0833333;AN=12;AO=6;CIGAR=1M1D4M1X2M;DP=181;DPB=180.333;DPRA=1.11486;EPP=16.0391;EPPR=367.818;GTI=0;LEN=1;MEANALT=3;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=0.869048;PAO=0;PQA=0;PQR=0;PRO=0;QA=226;QR=6530;RO=168;RPL=0;RPP=16.0391;RPPR=367.818;RPR=6;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=168;SRP=367.818;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:28:25,0,2:25:969:0,2:0,80:0,-7.52575,-87.1253,-0.92898,-80.5342,-79.9322 0|0:42:42,0,0:42:1642:0,0:0,0:0,-12.6433,-148.035,-12.6433,-148.035,-148.035 0|0:33:32,0,0:32:1236:0,0:0,0:0,-9.63296,-111.139,-9.63296,-111.139,-111.139 0|0:22:22,0,0:22:849:0,0:0,0:0,-6.62266,-76.7268,-6.62266,-76.7268,-76.7268 0|0:23:22,0,0:22:859:0,0:0,0:0,-6.62266,-77.2305,-6.62266,-77.2305,-77.2305 0|1:33:25,6,0:25:975:6,0:226,0:-11.0962,0,-78.4788,-18.6219,-80.285,-98.8041 dDocent_Contig_14144 47 . T A 653.23 . AB=0.193717;ABP=158.64;AC=4;AF=0.333333;AN=12;AO=45;CIGAR=1X;DP=307;DPB=307;DPRA=0;EPP=100.727;EPPR=571.936;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.244444;PAIREDR=0.244275;PAO=0;PQA=0;PQR=0;PRO=0;QA=1718;QR=9992;RO=262;RPL=0;RPP=100.727;RPPR=571.936;RPR=45;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=262;SRP=571.936;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:61:57,4:57:2187:4:131:0,-6.25422,-184.932 0/1:60:47,13:47:1786:13:505:-27.735,0,-142.908 0/1:36:30,6:30:1152:6:229:-10.1383,0,-93.1301 0/1:48:40,8:40:1536:8:312:-13.9947,0,-124.057 0/1:47:37,10:37:1380:10:383:-20.6768,0,-110.317 0/0:55:51,4:51:1951:4:158:0,-1.95621,-161.215 dDocent_Contig_14145 13 . C T 1478.32 . AB=0.186104;ABP=347.908;AC=6;AF=0.5;AN=12;AO=75;CIGAR=1M1X;DP=403;DPB=403;DPRA=0;EPP=165.871;EPPR=647.938;GTI=0;LEN=1;MEANALT=2;MQM=58.6133;MQMR=59.9697;NS=6;NUMALT=3;ODDS=0;PAIRED=0.8;PAIREDR=0.956229;PAO=0;PQA=0;PQR=0;PRO=0;QA=3011;QR=11880;RO=297;RPL=0;RPP=165.871;RPPR=647.938;RPR=75;RUN=1;SAF=75;SAP=165.871;SAR=0;SRF=297;SRP=647.938;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:56:44,2,9,1:44:1767:2,9,1:78,360,41:-16.2227,-23.0577,-168.052,0,-139.187,-142.889,-26.0828,-165.27,-142.214,-171.38 0|1:88:51,9,16,12:51:2045:9,16,12:322,639,489:-37.2669,-26.378,-192.149,0,-142.245,-163.675,-12.2706,-154.516,-128.148,-177.15 0|1:47:33,6,8,0:33:1309:6,8,0:230,325,0:-16.8846,-7.95122,-113.878,0,-88.8763,-105.343,-26.8186,-115.684,-107.751,-134.559 0|1:48:39,1,8,0:39:1562:1,8,0:40,321,0:-14.5577,-23.0027,-151.379,0,-125.381,-126.268,-26.2979,-151.68,-128.676,-154.975 0|1:91:75,0,16,0:75:2987:0,16,0:0,637,0:-30.2703,-52.8475,-298.793,0,-246.343,-241.526,-52.8475,-298.793,-246.343,-298.793 0|1:73:55,0,18,0:55:2210:0,18,0:0,729,0:-43.8511,-60.4078,-242.487,0,-182.483,-177.064,-60.4078,-242.487,-182.483,-242.487 dDocent_Contig_14146 48 . C A 68.6305 . AB=0.333333;ABP=5.18177;AC=1;AF=0.0833333;AN=12;AO=3;CIGAR=1X;DP=104;DPB=104;DPRA=0.473684;EPP=9.52472;EPPR=35.7114;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.90099;PAO=0;PQA=0;PQR=0;PRO=0;QA=119;QR=3961;RO=101;RPL=3;RPP=9.52472;RPPR=35.7114;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=101;SRP=222.329;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:27:27,0:27:1053:0:0:0,-8.12781,-95.0555 0/0:18:18,0:18:696:0:0:0,-5.41854,-62.9669 0/0:32:32,0:32:1261:0:0:0,-9.63296,-113.76 0/0:16:16,0:16:635:0:0:0,-4.81648,-57.481 0/1:9:6,3:6:237:3:119:-8.38574,0,-18.9934 0/0:2:2,0:2:79:0:0:0,-0.60206,-7.49763 dDocent_Contig_14147 31 . G T 278.179 . AB=0.189873;ABP=69.0066;AC=2;AF=0.166667;AN=12;AO=19;CIGAR=1X;DP=307;DPB=307;DPRA=0.811966;EPP=44.2683;EPPR=626.223;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.894737;PAIREDR=0.721254;PAO=0;PQA=0;PQR=0;PRO=0;QA=740;QR=11199;RO=287;RPL=0;RPP=44.2683;RPPR=626.223;RPR=19;RUN=1;SAF=19;SAP=44.2683;SAR=0;SRF=287;SRP=626.223;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:47:36,11:36:1420:11:445:-26.2577,0,-113.913 0/0:44:43,1:43:1642:1:41:0,-9.15075,-143.916 0/1:32:28,4:28:1112:4:156:-4.78199,0,-90.7339 0/0:67:64,3:64:2511:3:98:0,-11.0325,-217 0/0:46:45,0:45:1764:0:0:0,-13.5463,-158.873 0/0:71:71,0:71:2750:0:0:0,-21.3731,-247.613 dDocent_Contig_14148 139 . A T 2868.84 . AB=0;ABP=0;AC=0;AF=0;AN=12;AO=2;CIGAR=3X;DP=170;DPB=170;DPRA=0.918367;EPP=7.35324;EPPR=174.557;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=2;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=71;QR=3078;RO=79;RPL=0;RPP=7.35324;RPPR=174.557;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=0;SRP=174.557;SRR=79;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:30:28,2,0:28:1085:2,0:71,0:0,-2.29052,-91.2015,-8.42884,-91.8036,-97.585 0|0:27:26,0,1:26:1017:0,1:0,41:0,-7.82678,-91.4222,-4.03324,-88.0375,-87.7364 0|0:30:19,0,11:19:741:0,11:0,403:-27.5758,-33.2954,-94.2149,0,-61.2943,-57.9829 0|0:12:6,0,6:6:235:0,6:0,242:-18.5452,-20.3513,-39.6688,0,-19.7145,-17.9084 0|0:33:0,0,33:0:0:0,33:0,1254:-113.139,-113.139,-113.139,-9.93399,-9.93399,0 0|0:38:0,0,38:0:0:0,38:0,1451:-130.845,-130.845,-130.845,-11.4391,-11.4391,0 dDocent_Contig_14149 142 . C G 513.328 . AB=0.475;ABP=3.22745;AC=2;AF=0.166667;AN=12;AO=19;CIGAR=2X;DP=92;DPB=92;DPRA=1.53846;EPP=44.2683;EPPR=161.528;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=732;QR=2662;RO=73;RPL=0;RPP=44.2683;RPPR=161.528;RPR=19;RUN=1;SAF=0;SAP=44.2683;SAR=19;SRF=0;SRP=161.528;SRR=73;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|0:10:10,0:10:346:0:0:0,-3.0103,-31.467 0|0:10:10,0:10:350:0:0:0,-3.0103,-31.8312 0|1:16:6,10:6:224:10:388:-30.4615,0,-15.7023 0|1:24:15,9:15:571:9:344:-24.0931,0,-44.5059 0|0:23:23,0:23:847:0:0:0,-6.92369,-76.5483 0|0:9:9,0:9:324:0:0:0,-2.70927,-29.5027 dDocent_Contig_14150 97 . G A 38.0394 . AB=0.16129;ABP=33.9012;AC=2;AF=0.166667;AN=12;AO=5;CIGAR=1X;DP=85;DPB=85;DPRA=1.14815;EPP=13.8677;EPPR=176.728;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.975;PAO=0;PQA=0;PQR=0;PRO=0;QA=174;QR=2678;RO=80;RPL=5;RPP=13.8677;RPPR=176.728;RPR=0;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=80;SRP=176.728;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:20:20,0:20:667:0:0:0,-6.0206,-60.3446 0/1:12:10,2:10:346:2:69:-2.9403,0,-27.8622 0/0:11:11,0:11:371:0:0:0,-3.31133,-33.7165 0/1:19:16,3:16:545:3:105:-4.07659,0,-43.6543 0/0:9:9,0:9:294:0:0:0,-2.70927,-26.779 0/0:14:14,0:14:455:0:0:0,-4.21442,-41.262 dDocent_Contig_14151 30 . C T 2238.26 . AB=0.451977;ABP=6.55581;AC=5;AF=0.416667;AN=12;AO=80;CIGAR=1X;DP=201;DPB=201;DPRA=1.475;EPP=176.728;EPPR=265.758;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0.77686;PAO=0;PQA=0;PQR=0;PRO=0;QA=3163;QR=4718;RO=121;RPL=0;RPP=176.728;RPPR=265.758;RPR=80;RUN=1;SAF=80;SAP=176.728;SAR=0;SRF=121;SRP=265.758;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:24:24,0:24:927:0:0:0,-7.22472,-83.7364 0/1:44:35,9:35:1353:9:345:-18.1578,0,-108.789 0/1:32:25,7:25:997:7:279:-15.8482,0,-80.3965 0/1:23:15,8:15:585:8:320:-22.2436,0,-46.058 0/1:22:16,6:16:633:6:237:-15.0803,0,-50.6842 0/1:56:6,50:6:223:50:1982:-161.716,0,-3.5679 dDocent_Contig_14152 11 . A G 10072.7 . AB=0.619753;ABP=53.4582;AC=8;AF=0.666666;AN=12;AO=330;CIGAR=1X4M;DP=488;DPB=487.4;DPRA=0;EPP=179.992;EPPR=213.643;GTI=0;LEN=1;MEANALT=3.5;MQM=59.0848;MQMR=60;NS=6;NUMALT=4;ODDS=0;PAIRED=0;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=12160;QR=3845;RO=97;RPL=0;RPP=719.596;RPPR=213.643;RPR=330;RUN=1;SAF=83;SAP=179.992;SAR=247;SRF=97;SRP=213.643;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:55:13,1,1,0,40:13:514:1,1,0,40:40,29,0,1435:-113.12,-113.737,-155.745,-114.726,-153.738,-156.733,-117.033,-156.046,-157.034,-159.341,0,-39.0471,-40.0413,-42.343,-30.3018 0|1:106:29,17,6,0,54:29:1137:17,6,0,54:632,234,0,1967:-151.909,-108.915,-197.302,-141.404,-183.184,-233.102,-160.639,-202.419,-234.908,-254.142,0,-41.7878,-74.2708,-93.5049,-77.2493 0|1:70:15,0,2,0,50:15:590:0,2,0,50:0,71,0,1857:-147.117,-151.632,-200.167,-145.848,-194.382,-193.78,-151.632,-200.167,-194.382,-200.167,0,-48.5763,-42.7938,-48.5763,-33.5248 0|1:123:38,6,2,2,72:38:1531:6,2,2,72:229,79,78,2663:-206.177,-198.827,-323.221,-211.114,-318.526,-336.712,-211.204,-318.616,-330.903,-336.802,0,-107.415,-119.7,-119.79,-104.526 1|1:83:0,2,0,2,79:0:0:2,0,2,79:76,0,72,2941:-264.365,-258.132,-257.53,-264.365,-258.132,-264.365,-258.491,-252.258,-258.491,-257.889,-23.7814,-17.5385,-23.7814,-17.9168,0 1|1:51:2,11,0,3,35:2:73:11,0,3,35:420,0,114,1297:-133.804,-99.9462,-102.598,-134.406,-105.909,-140.369,-125.056,-96.5594,-131.019,-130.116,-28.5011,0,-34.4623,-25.1132,-23.9263 dDocent_Contig_14153 56 . T G 650.426 . AB=0.262774;ABP=69.9772;AC=4;AF=0.333333;AN=12;AO=37;CIGAR=1X;DP=197;DPB=197;DPRA=1.15862;EPP=83.3548;EPPR=348.274;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=6.93889e-18;PAIRED=1;PAIREDR=0.968553;PAO=0;PQA=0;PQR=0;PRO=0;QA=1281;QR=5507;RO=159;RPL=0;RPP=83.3548;RPPR=348.274;RPR=37;RUN=1;SAF=0;SAP=83.3548;SAR=37;SRF=0;SRP=348.274;SRR=159;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:29:29,0:29:1011:0:0:0,-8.72987,-91.3031 0/0:31:30,1:30:1035:1:35:0,-5.8333,-89.9621 0/1:22:18,4:18:601:4:138:-6.13774,0,-47.7802 0/1:20:15,4:15:525:4:140:-6.9474,0,-41.5961 0/1:45:29,16:29:1007:16:560:-37.1838,0,-77.3965 0/1:50:38,12:38:1328:12:408:-21.9955,0,-104.771 dDocent_Contig_14155 107 . N A 114.603 . AB=0;ABP=0;AC=8;AF=0.8;AN=10;AO=6;CIGAR=1X;DP=8;DPB=8;DPRA=1.75;EPP=16.0391;EPPR=0;GTI=0;LEN=1;MEANALT=1.25;MQM=40;MQMR=0;NS=5;NUMALT=1;ODDS=0;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=113;QR=0;RO=0;RPL=0;RPP=16.0391;RPPR=0;RPR=6;RUN=1;SAF=0;SAP=16.0391;SAR=6;SRF=0;SRP=0;SRR=0;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 1/1:2:0,2:0:0:2:39:-3.67313,-0.60206,0 1/1:2:0,2:0:0:2:48:-4.52528,-0.60206,0 ./.:.:.:.:.:.:.:. 1/1:2:0,1:0:0:1:19:-1.76679,-0.30103,0 1/1:1:0,1:0:0:1:7:-0.699826,-0.30103,0 0/0:1:0,0:0:0:0:0:0,0,0 dDocent_Contig_14156 10 . A G 54.2055 . AB=0.0816327;ABP=77.5051;AC=1;AF=0.0833333;AN=12;AO=4;CIGAR=4M1X7M;DP=207;DPB=208.333;DPRA=0.536496;EPP=3.0103;EPPR=365.697;GTI=0;LEN=1;MEANALT=2.5;MQM=50.25;MQMR=59.9357;NS=6;NUMALT=4;ODDS=0;PAIRED=0;PAIREDR=0.976608;PAO=0;PQA=0;PQR=0;PRO=0;QA=135;QR=6456;RO=171;RPL=0;RPP=11.6962;RPPR=374.332;RPR=4;RUN=1;SAF=2;SAP=3.0103;SAR=2;SRF=170;SRP=365.697;SRR=1;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0|1:22:19,1,2,0,0:19:729:1,2,0,0:39,74,0,0:-0.212884,-2.71802,-62.2274,0,-56.5807,-59.1848,-5.93245,-62.5284,-59.7869,-65.7347,-5.93245,-62.5284,-59.7869,-65.7347,-65.7347 0|0:27:21,0,2,0,3:21:801:0,2,0,3:0,61,0,117:-3.37902,-9.70065,-75.4696,-5.09197,-70.8586,-70.2565,-9.70065,-75.4696,-70.8586,-75.4696,0,-65.8489,-61.2385,-65.8489,-64.9459 0|0:23:20,0,0,2,1:20:762:0,0,2,1:0,0,73,41:0,-6.0206,-68.5258,-6.0206,-68.5258,-68.5258,-0.0880097,-62.5649,-62.5649,-61.9628,-2.6216,-65.1404,-65.1404,-59.1794,-64.8394 0|0:21:16,1,0,0,3:16:594:1,0,0,3:38,0,0,121:-5.25856,-6.94752,-55.2888,-10.075,-55.5898,-58.7072,-10.075,-55.5898,-58.7072,-58.7072,0,-45.6083,-48.7263,-48.7263,-47.8232 0|0:72:60,4,0,0,5:60:2267:4,0,0,5:150,0,0,182:0,-5.75821,-190.419,-18.0618,-191.623,-203.91,-18.0618,-191.623,-203.91,-203.91,-3.18549,-176.764,-189.051,-189.051,-187.545 0|0:42:35,2,0,0,0:35:1303:2,0,0,0:71,0,0,0:0,-4.97966,-111.185,-10.536,-111.787,-117.301,-10.536,-111.787,-117.301,-117.301,-10.536,-111.787,-117.301,-117.301,-117.301 dDocent_Contig_14157 108 . C T 1137.99 . AB=0.298429;ABP=70.4169;AC=3;AF=0.25;AN=12;AO=63;CIGAR=1X;DP=374;DPB=374;DPRA=0.9;EPP=139.813;EPPR=678.338;GTI=0;LEN=1;MEANALT=1;MQM=58.9048;MQMR=53.299;NS=6;NUMALT=1;ODDS=1.38778e-17;PAIRED=0.984127;PAIREDR=0.78135;PAO=0;PQA=0;PQR=0;PRO=0;QA=2159;QR=9761;RO=311;RPL=0;RPP=139.813;RPPR=678.338;RPR=63;RUN=1;SAF=0;SAP=139.813;SAR=63;SRF=0;SRP=678.338;SRR=311;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/0:41:40,1:40:1203:1:34:0,-9.03952,-103.972 0/1:95:82,13:82:2536:13:453:-12.5049,0,-194.229 0/0:68:68,0:68:2124:0:0:0,-20.47,-185.258 0/0:74:69,5:69:2222:5:174:0,-7.14827,-174.764 0/1:48:20,28:20:628:28:958:-72.0458,0,-29.8232 0/1:48:32,16:32:1048:16:540:-34.4702,0,-70.8271 dDocent_Contig_14158 111 . T C 3804.57 . AB=0.738938;ABP=115.081;AC=6;AF=0.5;AN=12;AO=167;CIGAR=1X;DP=226;DPB=226;DPRA=0;EPP=365.646;EPPR=131.127;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=6;NUMALT=1;ODDS=0;PAIRED=0.994012;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5087;QR=1850;RO=59;RPL=0;RPP=365.646;RPPR=131.127;RPR=167;RUN=1;SAF=0;SAP=365.646;SAR=167;SRF=0;SRP=131.127;SRR=59;TYPE=snp;technology.Illumina=1 GT:DP:AD:RO:QR:AO:QA:GL 0/1:25:3,22:3:101:22:693:-55.1445,0,-1.89802 0/1:42:11,31:11:338:31:907:-69.2603,0,-18.0757 0/1:21:4,17:4:130:17:542:-42.7651,0,-5.70026 0/1:44:14,30:14:431:30:905:-68.4883,0,-25.8436 0/1:39:15,24:15:462:24:700:-51.539,0,-30.1378 0/1:55:12,43:12:388:43:1340:-104.326,0,-18.6773