//Parameters for the coalescence simulation program : simcoal.exe 29 //Population effective sizes (number of genes) 18971 11710 39308 4241 66800 90648 10393 13381 14802 16174 18659 18841 6972 14627 15382 74449 4720 7410 5182 4894 30947 7832 5350 40570 14118 37263 8289 5217 12319 //Samples sizes and samples age 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 //Growth rates: negative growth implies population expansion 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 //Number of migration matrices : 0 implies no migration between demes 0 //historical event: time, source, sink, migrants, new deme size, new growth rate, migration matrix index 64 historical event 2547 2 2 1 0.0560716387642175 0 0 2964 22 22 1 0.410116406340139 0 0 3486 1 1 1 0.196975934835547 0 0 4108 3 3 1 0.79352784011123 0 0 4392 2 2 1 1.15551260219171 0 0 5174 22 22 1 2.58390295952169 0 0 5425 18 18 1 0.487299127059321 0 0 5633 16 16 1 1.82072069991197 0 0 6055 1 1 1 2.42012441480151 0 0 6193 27 27 1 1.55733926224089 0 0 7061 3 3 1 3.18486071488295 0 0 7191 2 2 1 1.65504644336322 0 0 8171 17 17 1 3.42329917748057 0 0 8419 26 26 1 1.37306345220772 0 0 8580 22 22 1 1.89840970596284 0 0 9215 18 18 1 10.1329948136647 0 0 9424 21 21 1 4.38360288910919 0 0 9444 28 28 1 3.17318504207962 0 0 9476 12 12 1 1.47314142794592 0 0 9602 16 16 1 2.63481299387406 0 0 9622 19 19 1 11.2640690051754 0 0 9988 1 1 1 1.78977709361683 0 0 10501 27 27 1 2.78765181501404 0 0 11422 14 14 1 4.20500195403944 0 0 11434 2 2 1 2.16074354915712 0 0 11522 3 3 1 2.49066161764982 0 0 12000 0 15 1 1 0 0 12000 1 15 1 1 0 0 12000 2 15 1 1 0 0 12000 3 15 1 1 0 0 12000 4 15 1 1 0 0 12000 5 15 1 1 0 0 12000 6 15 1 1 0 0 12000 7 15 1 1 0 0 12000 8 15 1 1 0 0 12000 9 15 1 1 0 0 12000 10 15 1 1 0 0 12000 11 15 1 1 0 0 12000 12 15 1 1 0 0 12000 13 15 1 1 0 0 12000 14 15 1 1 0 0 12000 15 15 1 1 0 0 12000 16 15 1 1 0 0 12000 17 15 1 1 0 0 12000 18 15 1 1 0 0 12000 19 15 1 1 0 0 12000 20 15 1 1 0 0 12000 21 15 1 1 0 0 12000 22 15 1 1 0 0 12000 23 15 1 1 0 0 12000 24 15 1 1 0 0 12000 25 15 1 1 0 0 12000 26 15 1 1 0 0 12000 27 15 1 1 0 0 12000 28 15 1 1 0 0 18485 15 15 1 0.665725592906818 0 0 29845 15 15 1 0.966882639541841 0 0 45537 15 15 1 1.04850259380669 0 0 67216 15 15 1 1.00153004727295 0 0 97164 15 15 1 0.886970801772637 0 0 138534 15 15 1 0.842547466972757 0 0 195684 15 15 1 0.928892326872094 0 0 274632 15 15 1 1.05739266263922 0 0 534355 15 15 1 1.05941273892558 0 0 //Number of independent loci [chromosome] 1 0 //Per chromosome: Number of contiguous linkage Block: a block is a set of contiguous loci 27 //per Block:data type, number of loci, per generation recombination and mutation rates and optional parameters DNA 281809 5e-08 1.7e-8 DNA 534083 7e-08 1.7e-8 DNA 652445 1e-07 1.7e-8 DNA 1324994 1.4e-07 1.7e-8 DNA 920740 1e-07 1.7e-8 DNA 463624 7e-08 1.7e-8 DNA 523106 5e-08 1.7e-8 DNA 299682 3.5e-08 1.7e-8 DNA 340914 2.5e-08 1.7e-8 DNA 209881 1.75e-08 1.7e-8 DNA 274042 1.25e-08 1.7e-8 DNA 147230 9e-09 1.7e-8 DNA 205258 7e-09 1.7e-8 DNA 2651356 5e-09 1.7e-8 DNA 2925175 3e-09 1.7e-8 DNA 579269 5e-09 1.7e-8 DNA 336990 7e-09 1.7e-8 DNA 271910 9e-09 1.7e-8 DNA 494091 1.25e-08 1.7e-8 DNA 330934 1.75e-08 1.7e-8 DNA 484440 2.5e-08 1.7e-8 DNA 414905 3.5e-08 1.7e-8 DNA 2332524 5e-08 1.7e-8 DNA 536804 3.5e-08 1.7e-8 DNA 684962 2.5e-08 1.7e-8 DNA 555352 1.75e-08 1.7e-8 DNA 1684260 1.25e-08 1.7e-8