control_fed_1.rna control_fed_2.rna control_fed_3.rna control_fed_4.rna control_starved_1.rna control_starved_2.rna control_starved_3.rna control_starved_4.rna atg_minus_fed_1.rna atg_minus_fed_2.rna atg_minus_fed_3.rna atg_minus_fed_4.rna atg_minus_starved_1.rna atg_minus_starved_2.rna atg_minus_starved_3.rna atg_minus_starved_4.rna control_fed_1.rp control_fed_2.rp control_fed_3.rp control_fed_4.rp control_starved_1.rp control_starved_2.rp control_starved_3.rp control_starved_4.rp atg_minus_fed_1.rp atg_minus_fed_2.rp atg_minus_fed_3.rp atg_minus_fed_4.rp atg_minus_starved_1.rp atg_minus_starved_2.rp atg_minus_starved_3.rp atg_minus_starved_4.rp total 37261250 24227405 99779921 31203884 43924176 11763420 39882849 26564726 46042342 9352301 46039955 21221755 45598439 11615047 69906411 30165392 36124798 11882355 19119689 3646263 10668499 5320610 17992905 1716252 6798361 10579115 17184298 20585930 20185409 7519579 9065105 2512813 duplicates 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 mapped 21384223 10890764 85293714 15070551 34249012 3589977 27073367 10844612 29884157 4095747 8831021 7542403 17261744 4916992 22915712 10829388 32909804 9753272 17061832 2778705 9290697 4032378 11977776 998460 6103689 7954814 11526681 13626356 14930364 4354624 4000517 1233474 paired_in_sequence 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 read1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 read2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 properly_paired 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 both_mapped 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 singletons 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 mate_mapped_chr 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 mate_mapped_chr_highq 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 pf_bases 756862520.0 602043580.0 785029399.0 843030623.0 547846810.0 274959849.0 580218995.0 727281068.0 826009926.0 207742688.0 1274785601.0 579707617.0 1081604582.0 258704733.0 1758834333.0 809869661.0 260941302.0 215423273.0 121609747.0 68957800.0 76140988.0 98612341.0 249563306.0 35740450.0 37819996.0 204724104.0 281571008.0 381602822.0 210451915.0 152299440.0 189178043.0 56525981.0 pf_aligned_bases 205635715.0 185751613.0 254484859.0 247003307.0 164734555.0 21952575.0 143912978.0 176910834.0 228862108.0 37784963.0 91015850.0 120116176.0 140670275.0 43617399.0 192856205.0 157577521.0 161926938.0 154430989.0 55744826.0 42387310.0 35181455.0 61590082.0 51735887.0 13286966.0 16346152.0 129307608.0 106342639.0 161760942.0 60039842.0 64088777.0 31511978.0 17427140.0 ribosomal_bases 3461.0 2027.0 187.0 285.0 24.0 1509.0 372.0 235.0 0.0 156.0 1118.0 202.0 3341.0 688.0 341.0 497.0 1251.0 11968.0 186.0 439.0 54.0 2204.0 181.0 120.0 750.0 12792.0 653.0 1354.0 838.0 22257.0 639.0 217.0 coding_bases 109387798.0 122828996.0 116163393.0 158886450.0 91936685.0 10287072.0 79027009.0 120428514.0 133989592.0 21683083.0 41197472.0 76735435.0 71448107.0 25874810.0 95239847.0 106833021.0 133670242.0 142026913.0 44463652.0 37534524.0 27272170.0 53799517.0 41181055.0 11050072.0 12274255.0 119881513.0 96604857.0 144503994.0 46683067.0 57682267.0 27042073.0 14415129.0 utr_bases 69008070.0 54677759.0 108020746.0 78520458.0 60115001.0 6758376.0 49101157.0 50805325.0 76829993.0 12361209.0 29985142.0 38829384.0 41755075.0 13403394.0 61001215.0 44988157.0 24377070.0 10406722.0 9263030.0 4296563.0 6818074.0 6838631.0 8900457.0 2005363.0 3453047.0 7655311.0 7523550.0 13811687.0 11210538.0 5282333.0 3578694.0 2622542.0 intronic_bases 26651649.0 7607900.0 29497128.0 8890125.0 12253717.0 4771477.0 15303299.0 5123816.0 17381676.0 3600420.0 19241387.0 4146528.0 27052066.0 4178684.0 35936219.0 5190403.0 3411459.0 1620315.0 1844657.0 464406.0 976389.0 787598.0 1471425.0 198881.0 562930.0 1455616.0 1938808.0 3069479.0 1938649.0 924915.0 791132.0 343408.0 intergenic_bases 584737.0 634931.0 803405.0 705989.0 429128.0 134141.0 481141.0 552944.0 660847.0 140095.0 590731.0 404627.0 411686.0 159823.0 678583.0 565443.0 466916.0 365071.0 173301.0 91378.0 114768.0 162132.0 182769.0 32530.0 55170.0 302376.0 274771.0 374428.0 206750.0 177005.0 99440.0 45844.0 ignored_reads 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 correct_strand_reads 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 incorrect_strand_reads 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 pct_ribosomal_bases 1.7e-05 1.1e-05 1.0e-06 1.0e-06 0.0 6.9e-05 3.0e-06 1.0e-06 0.0 4.0e-06 1.2e-05 2.0e-06 2.4e-05 1.6e-05 2.0e-06 3.0e-06 8.0e-06 7.7e-05 3.0e-06 1.0e-05 2.0e-06 3.6e-05 3.0e-06 9.0e-06 4.6e-05 9.9e-05 6.0e-06 8.0e-06 1.4e-05 0.000347 2.0e-05 1.2e-05 pct_coding_bases 0.531949 0.661254 0.456465 0.643256 0.55809 0.468604 0.549131 0.68073 0.58546 0.573855 0.452641 0.638843 0.507912 0.593222 0.493839 0.677971 0.825497 0.919679 0.797628 0.885513 0.775186 0.873509 0.795986 0.831647 0.750896 0.927103 0.90843 0.893318 0.777535 0.900037 0.858152 0.827166 pct_utr_bases 0.335584 0.29436 0.424468 0.317892 0.36492 0.307863 0.341186 0.28718 0.335704 0.327146 0.32945 0.323265 0.296829 0.307295 0.316304 0.285499 0.150544 0.067388 0.166168 0.101364 0.193797 0.111035 0.172036 0.150927 0.211245 0.059202 0.070748 0.085383 0.186718 0.082422 0.113566 0.150486 pct_intronic_bases 0.129606 0.040957 0.115909 0.035992 0.074385 0.217354 0.106337 0.028963 0.075948 0.095287 0.211407 0.034521 0.192308 0.095803 0.186337 0.032939 0.021068 0.010492 0.033091 0.010956 0.027753 0.012788 0.028441 0.014968 0.034438 0.011257 0.018232 0.018975 0.032289 0.014432 0.025106 0.019705 pct_intergenic_bases 0.002844 0.003418 0.003157 0.002858 0.002605 0.00611 0.003343 0.003126 0.002888 0.003708 0.00649 0.003369 0.002927 0.003664 0.003519 0.003588 0.002883 0.002364 0.003109 0.002156 0.003262 0.002632 0.003533 0.002448 0.003375 0.002338 0.002584 0.002315 0.003444 0.002762 0.003156 0.002631 pct_mrna_bases 0.867533 0.955614 0.880933 0.961149 0.92301 0.776467 0.890317 0.96791 0.921164 0.901001 0.78209 0.962109 0.804741 0.900517 0.810143 0.96347 0.976041 0.987066 0.963797 0.986878 0.968983 0.984544 0.968023 0.982575 0.962141 0.986306 0.979178 0.978702 0.964253 0.982459 0.971718 0.977652 pct_usable_bases 0.235704 0.29484 0.285574 0.281611 0.277544 0.061992 0.220827 0.235444 0.255226 0.163877 0.055839 0.19935 0.104662 0.151826 0.088832 0.187464 0.605681 0.707601 0.441796 0.606619 0.447725 0.614914 0.200677 0.365285 0.415846 0.622969 0.369812 0.41487 0.275092 0.413426 0.161862 0.301413 pct_correct_strand_reads 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 median_cv_coverage 0.697604 0.951492 0.772665 0.781333 0.708577 1.133853 0.758639 0.738083 0.762722 0.868298 0.962095 0.839637 0.740482 0.838673 0.76209 0.75426 1.260564 1.218853 1.295807 1.313507 1.376804 1.442832 1.460617 1.618068 1.515653 1.107665 1.175764 1.303215 1.285239 1.18831 1.426177 1.545922 median_5prime_bias 0.532323 0.572533 0.600855 0.637065 0.36337 0.656457 0.46515 0.55717 0.483576 0.588042 0.466982 0.564643 0.508104 0.582132 0.474771 0.650561 0.447268 0.319638 0.285891 0.467367 0.592194 0.890569 0.70631 0.981251 0.306406 0.31941 0.262514 0.267904 0.578279 0.531172 0.503145 0.900177 median_3prime_bias 0.615687 0.411851 0.599326 0.381848 0.66611 0.456141 0.588072 0.484145 0.542961 0.578902 0.543814 0.437896 0.620152 0.533599 0.614262 0.457755 0.015123 0.007347 0.035433 0.0 0.037651 0.010157 0.026065 0.0 0.027486 0.012128 0.0202 0.008383 0.03629 0.02224 0.034419 0.0 median_5prime_to_3prime_bias 0.860124 1.199406 0.966963 1.49283 0.580645 1.522727 0.779561 1.047182 0.865194 0.994521 0.825352 1.153846 0.807832 1.074689 0.807069 1.270804 25.421023 48.861111 9.226415 0.0 20.793103 117.018519 39.875 0.0 30.038835 18.55 10.28481 34.948113 12.222222 26.259259 25.0 0.0 sample library read_group rrna_reads 25370930 19708654 24546787 24079895 14919130 8986667 19054674 35648981 23753094 6553657 40360795 24219527 34760583 8249045 53751370 27089506 16049843 12340261 7287109 17968483 5434163 8732629 19357272 21311634 2159908 10164667 16943852 28231102 15322136 10872947 15592647 24052081 non_rrna_reads 21620204 19141764 21223136 22507363 13675757 8831630 16867582 20515798 22144886 6379560 39805364 17068605 32345763 7991155 52471380 23825786 8847530 7713202 3973323 2338945 2560326 3511153 7804842 1183294 1244750 7255049 9526503 12591461 7319769 5466225 6201369 1884228 pct_rrna 0.53991 0.5073 0.53631 0.51688 0.52174 0.50435 0.53044 0.63472 0.51752 0.50673 0.50346 0.5866 0.51799 0.50794 0.50603 0.53205 0.64464 0.61537 0.64714 0.88482 0.67974 0.71323 0.71266 0.9474 0.6344 0.58352 0.64011 0.69156 0.67672 0.66545 0.71546 0.92735