>rps14:trnfM-CAU >outgroup ---GATTCAAATATCCCTTTTCTTTTTCTATCC-ATTTTTATGATCATTGATCAGAGAGCAGCCCCTTGACAATTCTGTATAAAT----TAATATTGTTGTACAGATA------GAGGGGCCCATTCAACCCTGATCAGAGAATAGCGGGTTGACAAGACTAATGAAAAGTCTTAATATTGTTGTACAGATATAGAGGCCCATTCAACCCTTCTGTGTCTCGCTTTGTCTCCT >Monsonia_speciosa AAGGATTAAGAAATCCCTTTCATTTTTCTACCCCAGTTCCAGGATCAGTGATCAGAT--TGACCCCCTTCCCATTCTGTATAAATGGGATATCCTGTTTGTACAGATAT-GGAAGAGGGGCGCATTCAATCCTTGTTTTTCCCTGTCTCTTCGTTCTT-CTATTCAT------------------------------------------------------------------ >Monsonia_emarginata -------AAGAAATCCCTTTCATTTTTCTACCC-ATTTCTAGGATCAGTGATTAGAT--CGACCCCTTTACCATTCTGTATAAACGGCATATCCTGTTTGTACAGATATCGGGATAGGGGCGCATTCAATCCTTGTTTTTCTTTGTCTCTTTGTTTTT-CTATTCAT------------------------------------------------------------------ >trnfM-CAU:psbD >outgroup -------CTTTCCTACATTTTT-TGTAGGAAAA-----ATTTTTATATTCTTCCAACCAAATCCATTCTAAAGATTAGAA-------------ATAAACAAAAGAAAAAGGAAGTAGACCTAACCCATTGAATCATAACTACATCCCCTATTCTGA-------TATTCAAATTCGATCGGGATGAAAT----TCTAAGAGTGCTTTTTTTTCTTTCATATTTCTTTGGACTCCGGACGAATC------TGTCGATATTTCCGATTTCATCTTCTTGTTCCTAGCCTATGGAAGTTCCATAGGAA----TAACGAAAAGGGAGATTCTCTTCCTT------GAGAGAGAAAAGTTTATTA----GAAGTCACAGCATAAACGCCCCTTTCAATTCAATCTCTTTCTTTGATTCCAGAATACAAGAAAAATTTCTATTTAGATCGAGATC---AGTCTCT-AGGCTTGTATAATTAGATCGGATCATAGCTTCATGTACTCAAGATTTCCATTTGCATAATGATGCATGAGCTGGTTTTTTTTCCAAAAATGTAATGGAGAATGGATGTGAGAAAGAGACTTTTAGTTACAGTTTGAC-AGTTTTTATTATTCAA----------------------AAAAAAAGAATAGTTCATTCA------------------------CTTTTTCTGTCA-GAAAAAGGCTAATAGAAAAAGATTTGAAGTCTATTTCTTCTTTCGGCCCGTGAAAAGATATACCCCGGGGTTTTTCTAGTCACCTGAAAAAAAAGAAGAAATAGAACAAGGATAAAGAGAATAAAAGAAATTGAA-------AAAAGTCAATTCTAAGGAAGGTACTAAAAAAAATATAGAATACTGTATTCAATTAATACACATAGAAATGAATACATAAAAGTCTTTTTTTTTTTCG---------AAACCCATTAGATTAGA---AGGGGTAGTGTACGAGAAATCAAATCATACATAAAG---------TAAAGGATTGAATCTGAATCCTCTAAGGCCTCGAAAATGCCATAAGGTGTTCGGAAATGGTTGAAGTAGTTG---------AATAGGAGAATCACT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ >Monsonia_speciosa ATTCCCATTTTTTGACACAAGAATGTAAGAAAA-ATGGAGTTTTCTATTATTCTAATCAAACCCATTCTAAAGATTAAAACTAAAGATTAAAAAGAAACAAAAGAAAAGGTAAGTGGACCTAACCCATTGAATCATAATGCTATCCCCTACTCTGAGATTAGATATTAAAGGTCGGTCGAGATGAAATGAAATTCGAGAAGAGTGCTTTTTTTT-CCTATTTCTTTGGACTCCGGACGAATTTGAATTTGTCGATATTTCTGATTTAATCTTCTTGTTCCTAGCCTA--GAAGTTCCACGGAATGGAATAAAGAAAGTGGGGATTCCCTTCCTTCATAGACATAGAGAAAGGCTTATTC----CAAGTCACAGCATAAGCGACCTTGTCAATTCAATGCCTTTCTTTGATTCCAGAATACAATAGAAATCTCGATTTCTATCAATATCTCTAGACTTT-TAGAATATATAAATAGATAGGATCATAGCTTCATGTAGTCAATATTTCCAT------AATGGCGTGTAGGCCC-TTTTTGCTCTGGCAATGGAATGGAGAATGGGTGCGAGAAAGAGACTTTTATTTACAGTTTGACCGTTTTCTATTATTCAATTCAATACAATAACAATATGAAATAATAACAATATTCGATACAATAATTAATAATGGGAAATTCCATTTTTTTCTCTCATAAAAGGGGTTAATAGAAAAAGATGGGAAGTCTATTTCTTGTTTCGACCCGCGAGAGGGGATGCCC-GGAGCTTTTCTAGTAACCTCAAAAAAAA---GAAATATAACAAGGATAAGGG--ATAAAGAGAATCAAA------GAAAAGGTAAATTTCAATTA--TAAGGAAGGGAATAAAAAA-AGGATACTCTATTAATACACATAGAAATGAATACACTAAAGTACTTTTTTTTTTCTTTTTTTTATCAATCTTAGGAACAAGGTTCAAGAAAGGGGTTCAAAAGATTAGTTGATGGAATAAGAATAAGCGGAAGAGGTCTGGGGATTAACTGGTAGCAGGCAAGAGAAGGATTGTTCTTTTCTTCGAATGTCTCTTTCAATTTTTTAAATTTAAAAAGCGGACCTATATCATTAATGAGTTATAAGACAACTCGTGCTTTGGGTTCAAATCCT----------------TCTTTTTTTAAGGAAGGAATAGCATAACTAAATAAAGTTCATGGATTTACCCAGTTTGGGCTAGGGACCAATAAAGCCTTTTTCTATTTTCGGAACCCCTTAGAATTTAGGATTAGGTTAGAAGGGATAGTGTACTAGAAATCAAATTATACCTAAAGGAGGGGGTTGAGGTAGTCTCCGAAAATGTCAAAAAGGTCATGAGGGTGCTCGGAAATGGTTGAAGTAGTTGAATAGGAGGATCCCT >Monsonia_emarginata ATTAACATTTTTTGCCACAAAAATGTAGGAAAATATGGAGTTTTCTATTATTCTAATCAAATCTATTCTAAAGATTAGAA-----------AGAAAAAAAAAGAAAAAAGTAAGTGGACCTAACCCATTGAATCATAATGATATCCCCTATTCTGATATTAGATATTAAAGGTCGATCGGGATGAAATGAAATTCTAGAAGAGTGCTTTTTTTTTCCTATTTCTTTGGACTCCGGACGAATTCGAATTTGTCGATATTTCTGATTTCATCTTCTTCTTCCTAGCCTA--GAAGTTCCACGGAAT-----AAAGAAATTTTCGCTTCCTTTCCTTCATAGCGAAAGGCGTATTCCAAGTCACAGCAAGTCACAGCATGAGCGACCTTGTCAATTCAATGCCTTTCTTTAATTCCAGAATACAATAGAAATTTCTATTTCTATCCACATCTCTACACTTTATACAATCTATAAATAGATAGGATCATAGCTTCCTGTAGTAAATATTTCCAT------AATAACGCGTAGGCCA-TTTTTGCTCCGTCAATGGAATGGAGAATGGGTGCGAGAAAGAGACTTTTATTTACAGTTTTACCGGTTTCTATTATTCAATTCAATACAATAACAATATGAAATAATAACAATATTCAATCCAATAAAAAGAAATTCCA--TTTTTTCTCTCATACTCATAAAAGGGGTTAATAGAAAAAGATTTGAAGTCTATTTCTTGTTTCGACCCGTGAAAGGGGATGCCT-GGAGCTTTTCTATTCATCTCAAAAAAAAAA-GAAATATAACAAAGATAGGAG--ATAAAGACAATCAAATAAAATGAAAAAGTGATTTTCAATTAG-TAAGGAAGGGAATAAAAAA-AGGATACTCTATTAATCCACAGAGAAATGAATACA-TAAAGTACTTTTTTTCT------------CAATCTTACGAACAAGAGTCAAGAAAGGAGTTAAAAAGACTAATTGATGGAAGAAG------CGAAAGAGGTCTGGGGATTAACTGGTAGCAAGCAAGAGAAGGATTGTTCTTTTCTTCGAATATCTTTTTTAATCG---------AAAAAGCGGACCTATATCATTAATGAGTTATAAGACAACTCGTGCTTTGGGTTCAAATCCTGATTTTATTAAAGCCTTCTTTTTTTAAGGAAGGAATAACATAACTGAATTAAGTTCATGGATTTACCCAGTTTGGGTTAGGGACTACTAAAGCATTTTTTT--TTTCGAAATCCGTTAGAATTTAGAGTTCGGTTATAAGGGATAGTGTACGAAAAATCAAATTATACCTAAAGGAAAGGTTTGAGGTAGGCTCCGAAAATGTCAAAAATGGCATGAGGGTGCTCGGAAATGGTTTAAATAGTTGAATAGGAGGATCACC >psbD:trnS-UGA >outgroup GGAACTTTAGCTTTAGCCGGTCGTGATCAAGAAACTACCGGTTTCGCTTGGTGGGCGGGAAATGCCCGACTTATTAATTTATCCGGCAAACTGCTGGGAGCTCATGTAGCCCATGCGGGCTTAATCGTATTCTGGGCCGGAGCAATGAACCTATTTGAAGTGGCTCATTTCGTACCAGAGAAGCCTATGTATGAACAAGGATTCATTTTACTTCCCCACTTAGCTACTCTAGGTTGGGGAGTAGGTCCGGGCGGGGAAGTTATAGACACCTTTCCATACTTTGTATCTGGAGTACTTCATTTAATTTCCTCCGCAGTATTGGGCTTTGGTGGTATTTATCATGCACTTCTTGGACCTGAGACTCTTGAAGAATCTTTTCCCTTCTTTGGTTATGTGTGGAAAGATAGAAACAAAATGACCACAATTTTGGGTATTCACTTAATCTTGTTAGGTATAGGCGCTTTTCTTCTAGTATTCAAAGCTCTTTATTTTGGGGGTGTATATGATACCTGGGCTCCCGGGGGGGGAGATGTCAGAAAAATCACTAATTTGACCCTTAGCCCAAGTGTTCTATTTGGTTATTTACTAAAATCCCCCTTTGGAGGAGAGGGCTGGATTGTTAGTGTAGATGATTTGGAAGATCTAATTGGAGGGCACGTATGGTTGGGTTCCATTTGTATACTTGGAGGAATCTGGCATATCTTAACCAAACCCTTTGCGTGGGCTCGTCGTGCACTTGTATGGTCTGGCGAGGCTTACCTGTCTTATAGTTTAGGTGCTTTAGCTGTTTTTGGGTTCATTGCTTGTTGCTTTGTCTGGTTCAATAATACTGCTTATCCGAGCGAGTTCTACGGACCCACTGGGCCTGAAGCTTCTCAAGCTCAAGCCTTTACTTTTCTAGTTAGAGACCAACGCCTTGGAGCTAACGTGGGATCTGCTCAAGGACCCACTGGTTTAGGTAAGTATCTAATGCGTTCCCCCACCGGAGAAGTCATTTTTGGAGGAGAAACTATGCGTTTTTGGGATCTACGCGCTCCGTGGTTAGAGCCTCTAAGGGGTCCTAATGGGTTGGACTTGAGTAGGCTTAAAAAAGATATACAACCTTGGCAAGAACGGCGTTCGGCGGAATATATGACTCACGCTCCTCTAGGTTCTTTAAATTCGGTAGGTGGTGTAGCTACCGAGATCAATGCAGTCAATTATGTCTCTCCTAGAAGTTGGTTAGCTACCTCTCATTTTGTTCTAGGATTTTTTCTATTCGTAGGTCATTTATGGCACGCTGGAAGGGCTCGTGCAGCTGCAGCAGGATTTGAAAAAGGAATTGATCGTGATTTTGAACCTGTCCTTTCCATGACCCCTCTTAACTGAGAGAGGAAATACAATGCTTAAAGTAGGAATCC-----ATTTGATTCCAACATACATATTGCGGAGGGATTTGGTCATACTC--------------AAAAAGGATTCCTTTTTCCTTTCTTTTCAACTCATTTCTCTCTAATCTACTTTTTTATGGCTCGGCTATCATACCTAGCCGAGCCTTTCCTCTTTATGAGA--------------------CTAAGAAACTAGGCAAAACCAATAAAGAAACAAATCTATTCACCGAACAAA >Monsonia_speciosa GGAACTTTAGCCTTAGCTGGTCGGGATCAAGAAACTACCGGTTTCGCTTGGTGGGCCGGGAATGCCCGACTTATCAATTTATCCGGCAAACTCTTGGGAGCTCATGTAGCCCATGCGGGCTTAATCGTCTTCTGGGCCGGAGCAATGAACCTATTTGAAGTGGCTCATTTCGTACCAGAGAAGCCTATGTATGAGCAAGGGTTCATTTTACTTCCCCACTTAGCGACTCTAGGTTGGGGGGTAGGTCCGGGCGGGGAAGTTATAGACACCTTTCCATACTTTGTATCTGGAGTACTTCATTTAATTTCCTCCGCAGTATTGGGCTTTGGTGGTATTTATCATGCACTTCTTGGGCCTGAGACGCTTGAAGAATCTTTTCCCTTTTTCGGTTATGTGTGGAAAGATAGAAACAAAATGACCACAATTTTGGGTATTCACTTAATCTTGTTAGGTATAGGCGCTTTTCTTCTAGTATTCAAGGCTCTTTATTTTGGGGGTCTATATGATACCTGGGCTCCCGGGGGGGGGGATGTCAGAAAAATCACCAATTTGACCCTTAGCCCAAGTCTTATCTTTGCTTATTTACTAAAATCCCCTTTTGGGGGGGAAGGCTGGATTGTTAGTGTAGACGATTTGGAAGATATCATTGGAGGGCACGTATGGTTGGGTTCCATTTGTATACTTGGGGGGATCTGGCATATCTTAACCAAACCCTTTGCGTGGGCTCGTCGTGCACTTGTATGGTCTGGCGAGGCTTACCTGTCTTATAGTTTAGGTGCTTTATCTGTTTTTGGTTTCATTGCTTGTTGCTTTGTCTGGTTCAATAATACTGCTTATCCGAGCGAGTTCTACGGACCTACTGGGCCAGAAGCTTCTCAAGCTCAAGCATTTACTTTTCTAGTTAGAGACCAACGCCTTGGGGCTAACGTTGGATCCGCTCAAGGACCCACTGGGTTAGGTAAGTACCTAATGCGTTCCCCGACCGGGGAGGTCATTTTTGGAGGAGAAACTATGCGTTTTTGGGACCTGCGGGCTCCCTGGTTAGAGCCTCTAAGGGGTCCAAATGGCTTGGACTTGAGTAGGCTAAAAAAAGACATACAACCCTGGCAAGAACGACGTTCGGCGGAATATATGACTCACGCTCCCTTAGGTTCTTTAAATTCGGTAGGTGGCGTAGCTACCGAGATCAATGCAGTCAATTATGTCTCTCCTAGAAGTTGGTTAGCTACCTCGCATTTTGTTCTAGGATTCTTCCTATTCGTAGGTCATTTATGGCACGCGGGAAGAGCTCGTGCAGCTGCGGCAGGATTTGAAAAGGGAATTGATCGGGATTTTGAACCTGTCCTTTCCATGACCCCTCTTAACTGATAACTGAGA---GAGGGATAAAGTAGGAATCCATTTCGTTTGATCCCAACATACGTATTCCCGAGGGATTCGGTCATACTTAAAAAGAAAAAAAGAAAAAGGATTCCTTTTTCATCCTTTCACAACCCATTTCTCTCTAATCTACTTGTTTCTGGCTCGACTATCATACCTAGTTGAGCCCTCTCTCTTTATGAGA--------------------CTAAGAAACTAGGCAAAACCTATAAAGAAACAAATGGATTCACCGAACAAA >Monsonia_emarginata GGAACTTTAGCCTTAGCTGGTCGTGATCAAGAAACTACGGGTTTCGCTTGGTGGGCCGGAAATGCCCGACTTATCAATTTATCCGGCAAACTCTTGGGGGCTCATGTAGCCCATGCGGGCTTAATCGTCTTCTGGGCCGGAGCAATGAACCTATTTGAAGTGGCTCATTTCGTACCAGAGAAGCCTATGTATGAGCAAGGATTCATTTTACTTCCCCACTTAGCTACTCTAGGCTGGGGGGTAGGTCCGGGTGGGGAAATTATAGACACCTTTCCATACTTTGTATCTGGAGTACTTCATTTAATTTCCTCCGCAGTATTGGGCTTTGGTGGTATTTATCATGCACTTCTTGGGCCTGAGACTCTTGAAGAATCTTTTCCCTTTTTCGGTTATGTATGGAAAGATAGAAACAAAATGACCACAATTTTGGGTATTCACTTAATCTTGTTAGGTATGGGCGCTTTTCTTCTAGTATTCAAGGCTCTTTTTTTTGGGGGTGTATATGATACCTGGGCTCCCGGAGGGGGGGATGTTAGAAAAATCACCAATTTGACCCTTAGCCCAAGTCTTATCTTTGCTTATTTACTAAAATCCCCTTTTGGAGGGGAAGGCTGGATTGTTAGTGTAGACGATTTGGAAGATATAATTGGAGGGCACGTATGGTTGGGGTCCATTTGTATATTTGGGGGGCTCTGGCATATCTTAACCAAACCTTTTGCGTGGGCTCGGCGTGCACTTGTATGGTCTGGCGAGGCTTACCTGTCTTATAGTTTAGGTGCTTTATCTGTTTTTGGTTTCATTGCTTGTTGCTTTGTCTGGTTCAATAATACTGCTTATCCCAGTGAGTTCTACGGACCCACTGGGCCAGAAGCCTCTCAAGCTCAAGCATTTACTTTTCTAGTTAGAGACCAACGGCTTGGAGCTAACGTCGGATCCGCTCAAGGACCCACTGGTTTAGGTAAGTACCTAATGCGTTCCCCGACCGGAGAAGTCATTTTTGGAGGAGAAACAATGCGTTTTTGGGATCTGCGGGCTCCCTGGTTAGAGCCTCTAAGGGGTCCCAATGGGTTGGACTTGAGTAGGCTAAAAAAAGACATACAACCTTGGCAAGAACGACGTTCGGCGGAATATATGACTCACGCTCCCTTAGGTTCTTTAAATTCTGTAGGTGGCGTAGCTACCGAAATCAATGCAGTCAATTATGTCTCTCCTAGAAGTTGGTTAGCTACCTCGCATTTTGTTCTAGGATTCTTCCTATTCGTAGGTCATTTATGGCACGCGGGAAGAGCTCGTGCAGCTGCGGCAGGATTTGAAAAGGGAATTGATCGGGATTTTGAACCTGTCCTTTCCATGACCCCTCTTAACTGATAACTGAGA---GAGGGATAAAGTAGGAATTCCTTTCATTTGATACCAACATACATATTGCGGATTGCGGAAGGAGTCCGTCATATTTAAAAA-GAAAAAGCATTCCTTTTTCATCCTTTCA--ACCCATTTCTCTCTAATCTACTTTTTTCTGGCTCGATTATCATACCTAGTGGAGCCCTCTCTCTTTATGAGACTAAGAATCTCTTTATGAGACTAAGAAACTAGGCAAAGCCGATACTGAAAGAAATGGATTCACCGAACAAA >trnS-UGA:psbZ >outgroup AAGGATAATTTCTATTTTATTTTTCTTACACCGAATAGAACAT---AGAACATGGACCCATGGAT-----TGATACTATCACTATCCTGAAATAGATATCAGGCATGAATCTATG--------------C------------------TATGAGTTTCTTTATCTCCATACATATAGAGATGCATGATCCACCAGGCCCTTTAGGGTTGTGACGTA-----AAAAAAAAGTCACCTATACGACAAATAAAGTAGTAAAAGGG---GGAAATAAGTCATATAGAATCGATGGATTCGTGGTAAAAGACCTCCATGTTGT--AGAGTATAC-ATTTTATTACAATTAGAGTTCGGGGTTGCTAGAGGGATCAAATGGTATA-----TTTATTGATAACGTGGAGGATTAGAAAC >Monsonia_speciosa AAGGAGAATTTCT-------TTCTATTACGCCGAACCGAGCATGATAGAACATGGACGCATAGA-----GGGATGCTATCACTATACT---ATAGGCATCGGTGCCGAATCTATGAGTCCATTTATCTCC---------------GTCCACTTATAGCCATATACCCATATATAGAGAGATGCGGGATCCGCCCGTTCTTTTATGGTTGTGGCGTACGTAAAAAAAAAAGTCCCCAGTCCCACAAATAAAAAAAAGGAAGGACCAAAAACGGAGTCATATA--------GGGTTCATGGTAAAATCCCTCGATGAT----ATATTTTGTTACAATATTACACTTAGAGCTCAGGGCTGCTAGAGGGATCAAATGGTATAGTATATTTATTGGTAACGCCGAGGGTTAGAAAC >Monsonia_emarginata AAGGAGAATTTCTACTTTCTTTCTATTACGCCGAATCGAACATGATAGAATATGGATGCATGGATTGATATGATACTATCACTATACT---ATCGACATCAGTCACAAATCTATGAGTCGATTTATCTCCAATTTATCTCCACATGTCTACTTATACCTATATACCCATATATAGAGAGATCCAGGATCCGCCTTTTTTTTTATGATTGTGGCGTA-----AAAAAAAAGCCCCCAGTCCGACAAATAAATAGAAGGGGGGC----GAAGGAAGTCGTA----------GGGTTCATGGGAAAATCCCTCGATGATGTATATATTTTATTACAATATTACAATTAGAGCTCAGGGCTGCTAGAGGGATCAAATGGTATAGTATATTTATTGGTACCGCGGAGGGTTAGAAAC >rps15:ndhH >outgroup --------------------------------------------------------------------------------------------------------ATTTTATTTTCAATTATTTGCTTTATTAGATTTTGGCATTTGGATGAATGGAATGTC--TTTTCGTTTTCGGCAATTCATGAAAGAAAAAATCGAGGAAAAACTT >Monsonia_speciosa --------------------------------------------------------------------------------------------------TTGGAAAGGTTATTTTCAATTATTTGATTTATTCGATTTTTGCATTTGGATGAATTTCTTTTCGTTTTTCGTTTTCGGCAATTCATGAAAGAAAAAATCGAGGAAAAACTT >Monsonia_emarginata TGGGTTGAATATTCAAGAGTGGCCAACTTCTATTCAAGAGTGACCAACTTCTATTCAAAAGTCACCAACTTCTATTCGAGAGTCAAGAACTTCTTAAATTGGAAACATTATTTTCAATTATTTGATTTATTCGATTTTTGTATTTGGATAAATTTCTTTTCGTTTTTCGTTTTGGGCAATTCATGAAAGAAAAAATCGAGGAAAACTT-