>atpF:atpH >outgroup TGCTCTCCTCTTATAGATAGGACT------------------AACAAAGAACAGAGTTCTTTTTGTATCACTCCGCTCGCCCCCTTT-------TTTCTTTACATTTTGATTCTACGATAAAATTCAACA----------------------------------------- >Masdevallia_coccinea TGCTCTCCCCTTATAGATAGGACT------------------AACAAAAAACAGAGTTCTTTTTGTATCACTCCGCTTATTATTGTTAATGTAATTTAATAATTCTCAAATTTCTTAGTTATGGTTATGTTTTTATTCTTCTTTTTTTT-ATTCTATGATGAAATTAAACA >Masdevallia_picturata TGCTCTCCCCTTATAGATAGGACTAACAAAATAGATAGGACTAACAAAAAACAGAGTTCTTTTTGTATCACTCCGCTTATTATTGTTAATGTAATTTAATAATTCTCAAATTTCTTAGTTATGGTTATGTTTTTATTCTTCTTTTTTTTTATTCTATGATGAAATTAAACA >atpH:atpI >outgroup GTAAGTTCCTCGCACCAAAAAAAAAAGAAATGGTTAATGATACAACCAACCAATGAATTAGTACTTAATCTACTTCTACTTTGACTATTTACTTACTATTTACTTTACTACACTTATCACTTATTTTTTATTTTTTGAT-CTTTATCACTAAAATCTATTGGGTCGAAGTAGCTAAAAACTCCAAATGGAAATCAGAATATTACTGAATTGTCAGAACTACTTCGATATACCGTTTTTCCTTGTCTACCCATGATGGAGTTTTGTGTAAATAGATAT-GTATACGGTTTTAGTCATTGCATTTTCTTGTTTCTAAACTCTTCTATTCTTTCATTCAATCTTTCAATTCACAATCACAGACAAAATAGAAAAAGGACTGATACGGGAATCCATCTA-AATGCAGTGGGTTAGAAAAAAAATAGATAGGGGTAATTCCTATCTAA---------------CTAGTAAATAACATATACTTTTTTTCTTCCATAACGTAAATCACCTGCATTTTTTATTCTATTAAATCATATTCTGGAACCATTCTTAGAAACATAAACAAGGATTGATACTCATAGGCATTACATATA------TGTAGTAGGACCCCCAACCCTTCTTTCTCTTCCAAATTC-------TTCAATATCATCTACCTTTCTTCATAGATATATGTAGCTATTTGCATTTTCTTCTCCAACCCAGTGGATTATATTGAACCCCCCGCATTGCTTGAATTGGGATAAGCTTCCAAAAAGACTATTTTGAAAGTTAG >Masdevallia_coccinea GTAAGTTCCTCGCAACCAAAAAAA--GAAATGGTTAATGATACAACCAACCAATGAATTAGTACTTAATTTACTTATTTTTCTACT-TCTACTT-----TTACT--ACTACACTTCTTTTTTATTTTGTGATCTTTATCACGAAAATCCTAAAATCTATTAGGTCGAAGTAGCTAAAAGATCCAAATGGAATTCATAATATTACTGAATTGTCAGAACTACTTCAATATACCGTTTTTCCTT-TCTACC------------TTATGTAAATAGATATTGTATAAGGTTTTAGTCATTGCGTTTCCTTGTTTAAAAACTATTCTATTCTTTCTCTT--TCAGTCAATTCACAATAACAGACAAAATAGAAAAAAGACGGATATGGGAATCCATCTATAATGCAGTGGGCTATAAAAAAAATAGATAAGGGTAATTACTATCTAAGTAATTACTATATAACTAGTAATTAACATATACTTTGATTCTTCCATAACGTAAATCACCTGTACTTTTTATTCTATGAAATCGTAGTCTGGAACCATTATTCGAAACATAGATAAGGATTCATACTTATAGGCATTACATATACAGATATGTAGTAGGATTCCCAACTCTTCTTTATTTTCCAAATTCCAAATTCTGCAATATCATCTATCTTCATATATACATACATGTAGCTATTTGCATTTTCTTCTACAACC-AGTGGATTATATTTAACCCCCCGCATTGCTTGAATTGGGATAAGCTTAAAAAAAGACTATTTCGAAAGTTAG >Masdevallia_picturata GTAAGTTCCTCGCA-CCAAAAAAA--GAAATGGTTAATGATACAACCAACCAATGAATTAGTACTTAATTTACTTATTTTTATACT-TCTACTT-----TTACT--ACTACACTTCTTTTTTATTTTGTGATCTTTATCACGAAAATCCTAAAATCTATTAGGTCGAAGTAGCTAAAAGATCCAAATGGAATTCATAATATTACTGAATTGTCAGAACTACTTCAATATATCGTTTTTCCTT-TCTACC------------TTATGTAAATAGATATTGTATAAAGTTTTAGTCATTGCGTTTCCTTGTTTAAAAACTATTCTATTCTTTCTCTT--TCAGTCAATTCACAATAATAGACAAAATAGAAAAAAGACTATTTCGAAAGTTAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >atpI:rps2 >outgroup ------TTGTCCTCTAACAGAAATCGAACTTCAAAAAAG--GAATGATTTTGATTCAACCATCTCTTTTTC--------AATTCATCTACGTTAATTCATGAATTTCAGTTATGAATCGTATATTTAGGATCCTGAGAAATCACATAAAAAAA--CACCAATCATTTTATCTTTTTTAT-----TCAATATTCAAAACATAGTTCAAACTTCAACAAAGAGAGTTCA--CCAAAAACGAACTAATCTTCTTC-TTAATGAGAAGATAATCAACCATTTTTTATATAACTAGATGAGAAGATAA------------ >Masdevallia_coccinea TCGTCATTGTCCTCTAACAGAAATCGAACTTAAAAAAAA-GTAATTATTTTGATTCAACCATCTATTTCTCTATTTCTCAATTTATCTATATTCATTCATGAATTTCAGTTATGAATCATATATTTTGGATACCGAGAAATCACATAAAAAAAAATACCAATCATTTTCTCTTTTCAATAGGATTCAATAGTCAAAACATAGTTCAAACTCCAAAAAATGCAAACCAAAATAGTAACAATCAAAGAGAGTTCGCCAAAAACAAACTAATC--TTATTCTTTGTTCTTCTTAATGATAAGATTAATTAGAAGATAA >Masdevallia_picturata TCGTCATTGTCCTCTAACAGAAATCAAACTTAAAAAAAAAGTAATTATTTTGATTCAACCATCTATTTCTC--------AATTTATCTATATTCATTCATGAATTTCAGTTATGAATCATATATTTTGGATACCGAGAAATCACATAAAAAAAAATACCAATCATTTTATCTTTTCAATAGGATTCAATAGTCAAAACATAGTTCAAACTCCAAAAAATGCAAACCAAAATAGTAACAATCAAAGAGAGTTCGCCAAAAACAAACTAATC--TTATTCTTTCTTCTTCTTAATGATAATAGTAATTAGAAGATAA >rps2:rpoC2 >outgroup --------TTCCCACACTTTGTTTCTTTTTTTTT---AAAGAGATTCAGTACCCTGTGAAATAAATAATTGTTCCGACGGAACCTTCTACCAGGATTGACCATTGATCTACGACCCAAACCATGAATTTCATTCTTGGTTTTTTATTTCATTGATTACCAAATCCATAATCGGACCAGAGAGTTCAAGTAAAAAGAATGAACCTCTTGTTAGGAATTAGTAAATTACA------- >Masdevallia_coccinea TTCCCACACTTTCTCTTTTTATTTTTTTTTTTTT--CAAAGAGATTCAGTACCCTGTGAAATAAATAATTGTTCCGACGGAACCTTCTACCAGGATTGACCATTGATCTACGACCCAAACCATGAATTTAATT-------------------GATTACGAAATCCATAATTGGACCAGAGAGTTAAAGTAAAAAGAATGAACCTCTTGTTAGGAATTAGTAAATTACATTATGTA >Masdevallia_picturata TTCCCACACTTTCTCTTTTTATTTTTTTTTTTTTTTCAAAGAGATTCAGTACCCTGTGAAATAAATAATTGTTCCGACGGAACCTTCTACCAGGATTGACCATTGATCTACGACCCAAACCATGAATTTAATT-------------------GATTACGAAATCAATAATTGGACCAGAGAGTTAAAGTAAAAAGAATGAACCTCTTGTTAGGAATTAGTAAATTACATTATGTA >rpoC2:rpoC1 >outgroup AGGACCTCCATATTCTGCTGAGTAAGATTCCACAATGGGCCTGGGTCAGTGATTCAAAAACTTCCTTTCCTCAATCTTGATTCACACAGAAATTAAGAAATTAGGATACCGGTGAAATTGGAGAGACCTGAATTCCCACGAGTATGGGCATCGCTAATCGCTAATAGAATTTCTTAGTTTTCCTATAGCGCATGAGTTAGATAGCCTATGGC >Masdevallia_coccinea ------------TTCTGATGAGTAAGATTCCACAATGGGCCTGGGTCAGTGATTTGAAAACTTCCTTTCCTCAATCTTGATTCATACAGAAATGAATAAATTAGGATACCGGTGAAATTGGCGAGACCCAAATTCCCACGAGTATGGGCATCACTAAT-------AGAATTTATTAGTTTATATATAGAGCATGAGTTAGATAGC------- >Masdevallia_picturata AGGACCTCCATATTCTGATGAGTAAGATTCCACAATGGGCCTGGGTCAGTGATTTGAAAACTTCCTTTCCTCAATCTTGATTCATACAGAAATGAATAAATTAGGATACCGGTGAAATTGGCGAGACCCAAATTCCCACGAGTATGGGCATCACTAAT-------AGAATTTATTAGTTTATATATAGAGCATGAGTTAGATAGC------- >petN:psbM >outgroup ------------GCTAGGAA--TATTACTAATTTAGTAATTTACTGAA--------GA------------ATATAATTGTATCAATTCTGATCGTTTTGCGAAAACTTAAAAAAA--CTTGACTTGATTTAGTTTATCCAT-----ATTCGTTTATCTATCTAT---TATTATAGATAT----------------------TTAGTATTAAATTTCTATTTTATATTGAAT--TCTATTTCAGATTT-------------TTTTTCTTATTAT---TTTATTATTATAGAATATATGATATGGTTA--------TGGTATTTATATGGTATAAACTATATA-ATGATATTAGAGTATATGC-------CCGTACTATTCTTCCTACATTAATTCTTTCGATGGACCCCCGGATCCATATCCATAAGCATAAGAAGAGATATAAAAAAAATCAGGAATTCAAGCAGTTGGGCTTGCAATTATTTTGGATTGATCGAAATGCATACAAATGGGTGTAGAGAAAAAATATAGAATTTGAGTGCTATTTCATTTTGATGTACGTCTAA--------TATATATTATTCTTAGATATAGATATCTATTGTCAATTG---ATCTATATAAGAGA-------AAACTTCCTTCTGTATACAATACAACTTTATGTACTAAGAA-TAAGAATTTGAATA----TGAAATATTCTACAATACTCAATTGTATAGTGTGGTAGAAAGAGCTA-------TATATAGCTCTTTCTACCACACTATCTCAGATACTTCTGATTCCACATTTCATTTCAGACTGAAATAGAGTTTTAAACCCTTTCCTTTCTTCAATCATTGATAAAAAGGAAAAATTCAAGTTTCATTCAAA >Masdevallia_coccinea ---ACTAGGAATATTACTAATTTATTACTAATTTAGTACTTTACTTAACTTTACTTAACTTTACTTAAAAATCTACTTGTATCAATTGTGATCGTTTTGCGAAAGCTGAAAAAAA--CTTGACTTGCTTTAGTTTATCTATCTATTATTTCTTAGATTTTAGATTTATATTTTAGATATA-------TTAGTAGTATTATATTAGTATTAGATTTCTATTTTCTATTGAATCCTCTATTCAATATTCAATA-------GTTTTCTTTTATTTTATTCTTATTATTAGTAAGATTCTTATATTTCTAGAATTATCTAATTCTAATATATGATATGGTATTTAGATGGTAT-ATACTATATGCTATATGCCCGTACTCTTTTTCCTACATGAATTCTTTCGATGGGCCTCCGGATCCATATCCATAAGCATAAGAAGAGATATAAAAAATA--AAGAATTAAAGCAGTTGGGCTTGCAATTCTTTTGGATTGATCGAAATGCATACAAATGGGTGTAGATAAAAAATAGAAAAATTGAGTGCTATTTCATTTTGATGTACATCTATATTTCATTTTGATGTACATCTAATAGACTAATAGATGTTATTACTTAGATATCTATATAAGAGATAAGAGAAAGCTTCTTTCTGTATACAATACAACTTTATGTATTATTTACTAATAATATGAATGAATCTGAAATATTCTACAATATTCAATTGTATAGTGTGGTAGAAAGAGCTATATGCTATATATAGCTCTTTCTACCACACTATCTCAGATACTTCTGATTCCACATTTCATTTAAGACTTAAATAGAGTTTTCAACCCTTTCATTTATTCAATCATTGATAAAAATGAAGAATTCAAGTTTCATTCAAA >Masdevallia_picturata AGAACTAGGAATATTACTAATTTATTACTAATTTAGTACTTTACTTAACTTTACTTAA----------AAATCTACTTGTATCAATTGTGATCGTTTTGCGAAAGCTGAAAAAAAAACTTGACTTGCTTTAGTTTATCTATCTATTATTTCTTAGATTTTAGATTTATATTTTAGATATAAGATATATTAGTAGTATTATATTAGTATTAAATTTATATTTTCTATTGAATCCTCTATTCAATATTCAATATTAAAGAGTTTTCTTTGATTTTATTCTTATTATTAGTAAGATTCTTCTATTTCTAGAATGAGCTAATTCTCATATATGATATGGTATTTATATGGTAT-ATACTATATGC-------CCGTACTCTTTTTCCTACATGAATTCTTTCGATGGGCCCCCGGATCCATATCCATAAGCATAAGAAGAGATATAAAAAATA--AAGAATTCAAGCAGTTGGGCTTGCAATTCTTTTGGATTGATCGAAATGCATACAAATGGGTGTAGATAAAAAATAGAAAAATCGAGTGCTATTTCATTTTGATGTACATCTAA--------TAGATGT-----TATTACTTAGATATCTATTGTCAATTG---ATCTATATAAGAGA-------AAGCTTCTTTCTGTATACAATACAACTTTATGTATTATTTACTAATAATATGAATCAATCTGAAATATTCTACACTATTCAATTGTATAGTGTGGTAGAAAGAGCTATATGCTATATATAGCTCTTTCTACCACACTATCTCAGATACTTCTGATTCCACATTTCATTTAAGACTTAAATAGAGTTTTCAACCCTTTCAATTATTCAATCATTGATAAAAATGAAGAATTCAAGTTTCATTCAAA >atpE:rbcL >outgroup TCTTCAATTTGCTCTCCTCTTCTAAGTTCATAGCTTTCGCGGTAGCTTCATCGATGTTACCCACCAAATAAAAGGCCTGCTCGGGAAGACCGTCTAATTCTCCGGAAAGGATGAATTGAAACCCCCGAATTGTTTCTGCGAGACCAACATATTTCCCTGGAGAACCAGTAAAGACTTCTGCCACAAAGAAGGGTTGTGATAAGAAACGCTCAATCTTTCGTGCTCTTGCTACAGTTAAACGATCTTCTTCGGATAATTCGTCCAACCCAAGGATAGCTATAATGTCCTGAAGTTCTTTATAACGTTGTGAAGTTTGCTTAACCCTTTGCGCAGTTTCATAATGTTCCTCGCCAACGATCCGAGGTTGTAACATAGTTGATGTTGAATCCAAGGGATCTACTGCTGGATAAATACCTTTGGCAGCTAATCCTCTCGATAATACTGTAGTAGCATCTAAATGTGCAAATGTCGTGGCAGGAGCAGGGTCGGTCAAATCATCCGCAGGTACATAAACTGCTTGGATCGATGTTATAGATCCTTCTTTGGTAGAAGTAATTCTTTCTTGCAAAGAACCCATTTCCGTACTAAGGGTAGGTTGATAACCCACTGCAGAAGGCATTCTGCCTAATAAGGCAGAGACTTCGGACCCTGCTTGAACGAAACGAAATATATTGTCGATGAATAGAAGTACGTCTTGCTCATTAACATCCCGGAAATATTCCGCCATGGTTAGGGCAGTCAAGCCAACTCTCATACGAGCTCCTGGCGGTTCATTCATTTGACCATAGACTAGAGCCACTTTGGATTCTGCAATATTTTTTTCATTAATCACCCCGGATTCTTTCATTTCCATGTAAAGATCATTTCCTTCACGAGTACGTTCACCTACTCCACCAAATACGGATACGCCTCCGTGAGCTTTGGCAATGTTGTTGATCAATTCCATGATGAGTACTGTTTTACCCACTCCAGCTCCCCCAAATAGTCCTATTTTTCCTCCACGGCGATAGGGGGCTAAAAGATCCACCACTTTAATCCCGGTTTCAAAGATTGATAATTTCGTATCTAACTGTATGAAGGCGGGTGCAGATCTATGAATAGGAGATGTTGTGCGAGTATCGACAGAACCTAAATTATCAACGGGCTCTCCAAGAACGTTGAAAATTCGTCCGAGAGTAGCTCCCCCGACTGGAACACTTAGAGGAGCTTCCGTGTTAATCACTTTCATTCCTCTCATCAGACCATCTGTAGCACTCATAGCTACAGCTCTCACTCGATTATTTCCTAATAATTGTTGTACTTCACAAGTTACATTAATTTGTTGACCGACAGTATCTCGCCCCTTAATTACCAAAGCATTATAAATATTAGGCATTTTGCCCGGTGGAAAAATGACATCCAGTACTGGGCCAATAATTTGAGCGATACGCCCCAGGTTTTGTTCTTCAAGTGTAGAAACCACAGGATCAGAAGTAGTGGGATTGCTTCTCATAATCATAAATCATAATAAATATGTCAAAATTCTTTTTTGAAAAGTACTGAATCGAAAATCAATATCCGATAGCAAGTTGATCAGTTAATTCCA----GAATTCCATAAGAAATAAATGGGCGTTAGCATTCGATTGAGTTGGTACCACCCAATCGAATCCAATTGAATCCTTTACTCAGTGAATGAGTCAATTTTCAATTCTTTCTATTGTCCTTTTTCTTTTTTTTATTTGTGTTGTGCACCTATTCTTCTTCTTTATATACCATATCTGTTCCCTTTTCTAGATGAATTATGCCTCTTTTCACATCTAGGATTTACATATACAACATTATAGTACTGTCAATAGGGGGGGT-GGGGTCCTCTATTCTTT-CTTTTTATTTCTATATT-------TCTAATAGA-----------TTCTATT----------------------ATTATATTAATAAGAATAT----------------------CAAAT------------------------------------------------------------------------------------GATTTAGAATTCAATTTCAATT-----------------------------------------ATTTTCA-------------------------------------------------------------TTAATTGAAATTGAATTTTTTCATTTTATTTGATATTTTTATT------------TATTTTTTTCTATTCATTATTCAAATGAGTATGAAGA------------------------ATAATGAATAGAAAAAAAATTAAGAA---AGTGATCAATTCCATTAGAAAT-------AGAAATTTTCAAAACGAAGATTGGGTTGCGCCATATATATCAAAGAGTATAAAATAATGATGTATTTGGTGAATCAAATACATGGTCCAATAACG----CTTTTTCCATTTTCATTATTCATTAGTTGATAATATTAGTTTAGTTGAATATTTTTTGAATTGTAAAGATTTTTGTCAAAGGTTTCATTCACGCCTAATTCATATCGAGTAGACCTTGTAGTTGTGAGAATTCTTAATTA >Masdevallia_coccinea TCTTTGATTTGCTCTCCTCTTCTAAGTTCATAGCTTTCGCGGTAGCTTCATCGATGTTACCCACCAAATAAAAGGCCTGTTCGGGAAGACCATCTAATTCTCCGGAAAGGATGAATTGAAACCCCCGAATTGTTTCTGCAAGACCAACATATTTCCCTGGAGAACCAGTAAAGACTTCTGCCACAAAGAAGGGTTGTGATAAGAAACGCTCAATCTTGCGTGCTCTTGCTACAGTTAAACGATCTTCTTCGGATAATTCGTCCAACCCAAGGATAGCTATAATGTCCTGAAGTTCTTTGTAACGTTGTGAAGTTTGCTTAACCCTTTGCGCAGTTTCATAATGTTCCTCGCCAACGATCCGAGGTTGTAACATAGTTGACGTTGAATCCAAAGGATCTACTGCTGGATAAATACCTTTGGCAGCTAATCCTCTTGATAATACGGTAGTAGCATCTAAATGTGCAAATGTCGTAGCAGGAGCAGGGTCGGTCAAATCATCCGCAGGTACATAAACTGCTTGGATCGATGTTATGGATCCTTCCTTGGTAGAAGTAATTCTTTCTTGCAAAGAACCCATTTCTGTACTAAGGGTAGGTTGATAACCCACTGCAGAAGGCATTCTACCTAATAAGGCAGAGACTTCGGACCCTGCTTGAACGAAACGAAATATATTGTCGATGAATAGAAGTACATCTTGCTCATTAACATCCCGAAAATATTCCGCCATGGTTAGGGCGGTCAAGCCAACTCTCATACGAGCTCCTGGCGGTTCATTCATTTGACCATAGACTAGAGCCACTTTTGATTCTGCAATATTTTTTTCATTAATCACCCCGGATTCTTTCATTTCCATGTAGAGATCATTTCCTTCACGAGTACGTTCACCTACTCCGCCAAATACGGATACGCCTCCGTGAGCTTTGGCAATGTTGTTGATCAATTCCATGATGAGTACTGTTTTACCCACTCCAGCTCCCCCAAAGAGTCCTATTTTTCCTCCACGGCGATAGGGGGCTAAAAGATCCACCACTTTAATCCCTGTTTCAAAGATTGATAATTTGGTATCTAACTGTATGAAGGCGGGTGCAGATCTATGAATAGGAGATGTTGTGCGAGTATCGACAGGACCTAAATTATCAACGGGCTCTCCAAGAACGTTGAAAATTCGTCCGAGAGTAGCTCCCCCGACTGGAACACTTAGAGGAGCTCCAGTGTCAATCACTTTCATTCCTCTCGTCAGACCATCTGTAGCACTCATAGCTACAGCTCTCACTCGATTATTTCCTAATAATTGTTGTACTTCACAAGTTACATTAATTTGCTGACCGACAGTATCTCGACCCTGAATTACCAAAGCATTATAAATATTAGGCATCTTGCCCGGTGGAAAAAGGATATCCAGTACTGGGCCAATAATTTGAGCGATACGCCCTAGGTTTTGCTCTTCAAGTGTAGAAACCACAGGATCAGAAGTAGTGGGATTGCTTCTCATAATCATAAATCATAATAAATATGTCGAAATTCTTTTTTTAAAAGTACTAAATC-AAAATAAATATCCGATAACAAGTTGATCGGTTAATTCCATAAGAAACACCATAAGAAAGAAATGGGAGTTAGCATTTGATTGAGTTGGTACCACCCAATCGAATCCAATGAAATTCTTTACTCAGTGAATGAGTAAATTTTCAATTCTTTCTATTGTATTTTTT--TATTTTGATTTGTGTTGTGCACCTATCCTTCTT---TATATATCATATATGTTCCCTTTTCTAGATGAATTCTGACTCTTTTAACATCTAGGATTTACATATACAACAT-ATATTACTGTCAAGAGAGGGGGCCGGGGTCCTCTATTCTTTACTTTTTCTTTCTATATTAGCTATATTAGATAGAATATTAGCTATTTCTATTTACTATATGATCGATTTACTATATTATATATATACATATATCTTTATATCGCTTTACTATCTTTAAATATCTCTTTACTATCTTGAATATCTTTCTCTTTACTTTTTACTATCTTGAATATCTTTCTCTTTACTTTAGAATTTCTGAATTCTAATTTAGAATTCAATTTCATTTCAATTGAAAAATAAGAAAAATAATTAAGAATTAGAATAATAATCCTTAA--------TAAATAGAATTTCAATATAATTCAATTAAAATAGATAAAATAAATATTCAATTGAAATGAAATTGAATTTTTTCATTTTACTTGATGTTTTTTTT-ATCTTTATTTTTCTTTTTTTATATTCATTATAAAAAGGAGTATGAAGAAGAATGAATATGATATAGAATTAGAATATGAATATAAAAAAA-TTAAGAAGGTAGTGATTAATTCCATTATAAATTATAAATATAAATTTTCAAAACGAAGATCGGGTTGCGCCATATATATCAAAGAGTATAAAATAATGATGTATTTGGTGAATCAAATACATGGTCTAATAACGAACCCTTTTCAAATTTTCATTATTCATTAGTTGATAATCTTAGTTTAGTTGAATCTTTTTTGAATTGGAAATATTTTT---------TTAAGTCACGCCTAATTCATATCGAGTAGACCTTGTTGTTGTGAGAATTCTTAATTA >Masdevallia_picturata TCTTTGATTTGCTCTCCTCTTCTAAGTTCATAGCTTTCGCGGTAGCTTCATCGATGTTACCCACCAAATAAAAGGCCTGTTCGGGAAGACCATCTAATTCTCCGGAAAGGATGAATTGAAACCCCCGAATTGTTTCTGCGAGACCAACATATTTCCCTGGAGAACCAGTAAAGACTTCTGCCACAAAGAAGGGTTGTGATAAGAAACGCTCAATCTTGCGTGCTCTTGCTACAGTTAAACGATCTTCTTCGGATAATTCGTCCAACCCAAGGATAGCTATAATGTCCTGAAGTTCTTTGTAACGTTGTGAAGTTTGCTTAACCTTTTGCGCAGTTTCATAATGTTCCTCGCCAACGATCCGAGGTTGTAACATAGTTGACGTTGAATCCAAAGGATCTACTGCTGGATAAATACCTTTGGCAGCTAATCCTCTTGATAATACGGTAGTAGCATCTAAATGTGCAAATGTCGTGGCAGGAGCAGGGTCGGTCAAATCATCCGCAGGTACATAAACTGCTTGGATCGATGTTATGGATCCTTCCTTGGTAGAAGTAATTCTTTCTTGCAAAGAACCCATTTCTGTACTAAGGGTAGGTTGATAACCCACTGCAGAAGGCATTCTACCTAATAAGGCAGAGACTTCGGACCCTGCTTGAACGAAACGAAATATATTGTCGATGAATAGAAGTACATCTTGCTCATTAACATCCCGAAAATATTCCGCCATGGTTAGGGCGGTCAAGCCAACTCTCATACGAGCTCCTGGCGGTTCATTCATTTGACCATAGACTAGAGCCACTTTGGATTCTGCAATATTTTTTTCATTAATCACCCCGGATTCTTTCATTTCCATGTAGAGATCATTTCCTTCACGAGTACGTTCACCTACTCCGCCAAATACGGATACGCCTCCGTGAGCTTTGGCAATGTTGTTGATCAATTCCATGATGAGTACTGTTTTACCCACTCCAGCTCCCCCAAAGAGTCCTATTTTTCCTCCACGGCGATAGGGGGCTAAAAGATCCACCACTTTAATCCCTGTTTCAAAGATTGATAATTTCGTATCTAACTGTATGAAGGCGGGTGCAGATCTATGAATAGGAGATGTTGTGCGAGTATCGACAGGACCTAAATTATCAACGGGCTCTCCAAGAACGTTGAAAATTCGTCCGAGAGTAGCTCCCCCGACTGGAACACTTAGAGGAGCTCCAGTGTCAATCACTTTCATTCCTCTCGTCAGACCATCTGTAGCACTCATAGCTACAGCTCTCACTCTATTATTTCCTAATAATTGTTGTACTTCACAAGTTACATTAATTTGCTGACCGACAGTATCTCGACCCTGAATTACCAAAGCATTATAAATATTAGGCATCTTGCCCGGTGGAAAAATGATATCCAGTACTGGGCCAATAATTTGAGCGATACGCCCTAGGTTTTGCTCTTCAAGTGTAGAAACCACAGGATCAGAAGTAGTGGGATTGCTTCTCATAATCATAAATCATAATAAATATGTCGAAATTCTTTTTTTAAAAGTACTAAATC-AAAATAAATATCCGATAACAAGTTGATCGGTTAATTCCATAAGAAAGACCATAAGAAAGAAATGGGAGTTAGCATTTGATTGAGTTGGTACCACCCAATCGAATCCAATGAAATTCTTTACTCAGTGAATGAGTAAATTTTCAATTCTTTCTATTGTATTTTTT--TCTTTTGATTTGTGTTGTGCACCTATCCTTCTT---TATATATCATATATGTTCCCTTTTCTAGATGAATTCTGACTCTTTTAACATCTAGGATTTACATATACAACAT-ATATTACTGTCAAGAGAGGGGGCCGGGGTCCTCTATTCTTTACTTTTTCTTTCTATATTAGCTATATTAGATAGAATATTAGCTATTTCTATTTACTATAGGATCTATTTACTATATTATATATATATACATAT-----------------ATCTTTATAT---------------------------------CTCTTTACTATCTTGAATATCTTTCTCTTTACTTTAGAATTTATGAATTCTAATTTAGAATTCAATTTCATTTCAATTGAAAAATAAGAAAAATAATTAAGAATTAGAATAATAATCCTTAATAAATAAATAAATAGAATTTCAATATAATTCAATTAAAATAGATAAAATAAATATTCAATTGAAATGAAATTGAATTTTTTCATTTTACTTGATGTTTTTTTTTATCTTTATTTTTCTTTTTTTATATTCATATTCTAATTCTATATCATATTCATTCTTCTTCATACTCATTTTTATAATGAATATAAAAAAA-TTAAGAAGGTAGTGATTAATTCCATTAGAAAT-------ATAAATCTTCAAAACGAAGATTGGGTTGCGCCATATATATCAAAGAGTATAAAATAATGATGTATTTGGTGAATCAAATACATGGTCTAATAACGAACCCTTTTCAAATTTTCATTATTCATTAGTTGATAATCTTGGTTTAGTTGAATCTTTTTTGAATTGTAAATATTTTT---------TTAAGTCACGCCTAATTCATATCGAGTAGACCTTGTTGTTGTGAGAATTCTTAATTA >rbcL:accD >outgroup CGCGTATAATTAAGCAATTCCTGTTTGTTCTCCTAATTGATTGCAATTAAACTTGGCCCAATCTTTTTTTTT---AGGAAAAGATTGGGCCGAA-----TAAAGAATGAACATCTTATACTAATCTTATACTATGA-------GAGTCTTTGTGTATTTGCATATATCTTTT----ATATGTACAGACCTTACCATATAC------------AAGTAGATACAAAATATAAACATAAGAAGATAAGATCAAAG----ACTAAACAACTTATCTATTCTATTATTTTTTGTTGGAGCCATAGCCATAGGCTGAATTAAGGATCCTTGGGATTG-----GTGGATCATTTTCTATTCCTTAGTTT-AAGGCCATAGATCAAGCCAAGGGAAGGATCCCTTTGACCCCCCCCATCCTTTATATTGTCTTTTTCGTTCCCTGTTGTAATAGAAACTCATTTTCTTATTTGACTATATGACACGAGATTCTACGAGA-----ATCCATTTTTCATTTATGGGAAGAAACAACTAAGTC------TCTTTTTGATGAGAATTTAAAGTTTTATATGAGAGAAACCTGTCTTTATATATATATATATATATTTTTTGAGGAAAAGATTCTATCATAATCACTATCATAATATATATTGAAATGATTCACCGGATTCCCCAAAAGGAGAATCCTTTCTTTTCAAGA-----CTCGTTCGTTTTCCATTAACAATCTTAATCATTGGATCATATGCTTCATTTGAATTATGATGAGAAATCAAAAGAAAGAAAAAAGAAATAGTAAAATGGTTTTTTCTTCGTCGAATGACTATTCATCTATTAGTATTAGGTTTTCATCAAATAGGGGGCAGAAAGACTCT >Masdevallia_coccinea CGCGTATAATTCAGCAGTTCCTGTTTGTTCTCCTAATTGATTGCAATGAAACTTGGCCCAATCTTTTCCTCAAAAAAAGAAAGATTGGGCCAAATCTAATAAAGAATAAACATCTTATACTAATCCTATACTATGAACTATGAGGGTCTTTGTGTATTTGCATATATCTTTTTTTTATATGTAAAGACTTTACGATATACAATAGAATATACAAGTATATACAAAATATAAACATAATAAGATAAGATCGAAGGAAGACTAAACAACTTATCTATTCTATTCTTTCTTGTTGGAACCATAG------ACTGAATTATGGATCCTTGGGATTGGATTGGCGGATCATTTTATATTCCTTAGTTT-CAGACCATAGATTAAGCCAAGGGAAGGATCCCTTCTACCCCT---ATCCTGTATATTGTCTTTTTCGTTCCCTGTTGTAATAGAAACTCTTTTTATTCTTTGACTATATGACACGAGATTCTACGAGACGAGAATTCCTTTTGAATTTATGGGAAGAAACAACTATGTATAATTATATTTTTGATGATAATTGAAAGTTTTACATGAGAGAAACCTGTCTTTCTATTTATATATCTTTTTTTTTTTG-AAAAA-ATTCTATCAGAATCACTATCATAATAT----TGAAATGATTCACCGGATTCCTCAACAGGAGAATCCTTTATTTTAAAGA-----CTCGCTCGTTTTTCATTAACAATCTTGATGATTCGATCATATGCTTCATTTGAATTCTGATGAGAAAT-----------AAAAAGAAATAGTAAAATGATTTTTTCTTCATCGAATGACTATTCATCTATTAGTATTAGGTTTTCCTAAAATAGGGGACAGAAAGAATCT >Masdevallia_picturata CGCGTATAATTCAGCAGTTCCTGTTTGTTCTCCTAATTGATTGCAATGAAACTTGGCCCAATCTTTCTTTTTTTTAGGAAAAGATTGGGCCAAATTTCATAAAGAATAAACATCTTATACTAATCCTATACTATGAACTATGAGGGTCTTTGTGTATTTGCATATATCTTTTTTT-ATATGTAAAGACTTTACGATATACAATAGAATATACAAGTATATACAAAATCTAAACATAATAAGATAAGATCGAAGGAAGACTAAACAACTTATCTATTCTATTCTTTCTTGTTGGAACCATAG------ACTGAATTATGGATCCTTGGGATTGGATTGGCGGATCATTTTATATTCCTTAGTTTTCAGACCATAGATCAAGCCAAGGGAAGGATCCCTTCTACCCCT---ATCCTGTATATTGTCTTTTTCGTTCCCTGTTGTAATAGAAACTCTTTTTATTCTTTGACTATATGACACGAGATTCTACGAGACGATAATTCCTTTTGAATTTATGGGAAGAAACAACTATGTATAATTATCTTTTTTATGATAATTGAAAGTTTTACATGAGAGAAACCTGTCTTTCTATTTAGATATCTTTTTTTTTTTTTGAAAA-ATTCTATCAGAATCACTATCATAATAT----TGAAATGATTCACCGGATTCCTCAACAGGAGAATCCTTTCTTTTAAAGAAAAGACTCGCTCGTTTTTCATTAACAATCTTAATGATTCGATCATATGCTTCATTTGAATTCTGATGAGAAAT-----------AAAAAGAAATAGTAAAATGATTTTTTATTCATCGAATGACTATTCATCTATTAGTATTAGGTTTTCCTAAAATAGGGGGCAGAAAGAATCT >accD:psaI >outgroup AAAAGATTGTTAAAAAGATTGAAATTCTTCATTTTAAAATGGAAGTATAGCACTAGCTTCAGTTATTTTTATTTGTAGCGAATAAGCATTTAGTTCATTGTAATCAAAAAATAAAAAAAAACAAAACTAAGAAGATGGTGTTTTCTTTGGGGACATCAGTTATAAGTGTAGTAAGAGTCAGAAGTTTTGGATAATTACTTTTTGCCCCGAATCCTTTTTTTATTCTACCTCTCTTCCTGATTAGGAATAAGCATTCCTCTATCGACAAGATAAAAAATAGTTTCTTTATCCTTCCGAGAAATCAGGGAAAGAAAAAGAATTTTCTCCGTCCTTTTGCCATATTCATATA---TAGAACAACGAAAAAAAAAAAA-----AGAAAAATAAAATCTTAAAGAAAAAGAAAGAAGAAATATCAAATCAAATAAATCAAATAGAAATATTAAAATAACAAATAAGAAGAATAAGAATATA-GAATGA-GAATAATAAGACTATAGAAGTTCTTTCTATTTACCGAGAGCCCCCGTTTTTCACTAGGAATCCCT------GTTTGTTGGATAAGATTGGTTAAAGTCGCGAACTCATAAGAAACTCTTTTCTATCTTTTCTTTCAAAACACCTTTTTTGTTTTGAAAGAAAAGATAGAAAGA------AGATAAGGATGGGAGAAGAAGAATCCAATTTCTGAAAGCGGATTCTCATACATATTCATGTAGAAAGAGGAATAGGTACACTTCATTTAGTTCTACATTCGTTGCACTTATTGATTATTAAGTACTTCATATGAAGATTCTCTTCATATTCTTTCTAATAGATAGACTTATCATAAGATAT-------CTTTATAATTATAATTTATAATTATAATAGGTACAAATACGAAATCGAGGTACCCATTCT >Masdevallia_coccinea ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAAGATTGAAATTCTTCATTTTCAAATGGAAGTATATCACTAGCTTCAGTTATTTTTATTTGTAGCGAATACGCATTTAGTTCATTATAATAGAAAAAAAAAAAAAAATGATAAAAAAAGATATAGGAAAAAAATAAAAAGAAAATATTCAATAAAAAGAA---AGAATAAATCT-AAAAT--CAAATAAAGAAAATAGAAATATTCAAATAACAAATAAGAATAATATAGAAGTTCTTTTTATTTAGCGAAAACCCCCGTTTTTCACTAGGAATCCTTATCCTTGTTTGTTGGATAAGATTGGTTAAAGTCAGGAACTCATAAGAAACTCTTTTCTATCTTTCCTTTCAAAACAAAAAGGT-GTTTTGAAAAGAAAGATAGAAAGACGATAAAGATAAGGATGGGAGAAGAAGAATCCAATTTCTGAAAGCGGATTCTCATACATATTCGTGTAGAAAGAGGAATAGGTACACTTCATTGAGTTCTACATTCGTT------ATTGATTATTAAATACTTCATATTAATATTATCTTAATATTATTTATAATAGATAGACTTATCATAAGATATCTGATATCTTTATAATTCTAATTTAGAATTATAATAGGTACAAATATGAAATCGAGGTACCCATTCT >Masdevallia_picturata -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGATTGAAATTCTTCATTTTCAAATGGAAGTATATCACTAGCTTCAGTTATTTTTATTTGTAGCGAATACGCATTTAGTTCATTCTAATGAAAAAAAAAATA-----GATAAAAAAAGATATCG--AAAAAATAAAAAGAAAATATTCAATAAAAAGAA---AGAATAAATAT-AAAAT--CAAATAAAGAAAATAGAAATATTCAAATAAAAAATAAGAATAATATAGAAGTTCTTTTTATTTAGCGAAAACCCCCGTTTTTCACTAGGAATCCTTATCCTTGTTTGTTGGATAAGATTGGTTAAAGTAAGGAACTCCTAAGAAACTCTTTTCTATCTTTCCTTTCAAAACAAAAAGGT-GTTTTGAAAAGAAAGATAGAAAGACGATAAAGATAAGGATGGGAGAAGAAGAATCCAATTTCTGAAAGCGAATTCTCATACATATTCGTGTAGAAAGAGGAATAGGTACACTTCATTGAGTTCTACATTCGTT------ATTGATTATTAAATACTTCATATTAATATTATCTTAATATTCTTTATAATAGATAGACTTATCATAAGATATCTGATATCTTTATAATTCTAATTTAGAATTATAATAGGTACAAATATGAAATCGAGGTACCCATTCT >psaI:ycf4 >outgroup TACGATGGGACCAAATCTCATCAATTTCTTTCAACACTGGATCATCATACAGATACTTTTTTAATGTAATATGGTAGGATATATGATATGTGGCCTTTCCGAAAACAAATGGAAGAGT-----TGTTATGTATGCCG-TGCATAATATACGCATTAATG---CATGTATATGCGGTTATAGCTTAATCAATGAAA-------------AATGATCAGCAAATCTTTTTTGAAAA-TCTTTGAAATAGAAACTCAATGTATCTAACCAATTATTTCTAATGGTTCCCGTCGGAATACTGCTAGTTGATGAAAGTTACTTCGGGATCAAGCAAGAAAAGTCGAGTCAAATCC-ATTTGGGTTATTCTCTCAATTCCAATCGAATGCAACTGGATCTAGTATAGT >Masdevallia_coccinea TATGATGGGACCAAATCTCATCAATTTCTTTCAACACTTGATCATCATACAGATACTTTTTT--TT-AATGTAATATGATATATG-----TGGCCTTTCCGAAAACAAATGGAAGAGTTGTTTTGTTATGTATGCCGATGCATAATATACGCATTAATGCAGCATGTATATGCGGTTATAGCTTAATCAATGAAATGATTAAATGAAAAATGATCAGCAAATCTTTTTTGAAAAATCTTTGAAATAGAAACTCAATGTATCTAACCAATTCTTCCTAATGGTTCCTATCGAAATGCTGCTAGTTGATGAAAGTTACTTCAGGATCAAGCAATAAAAGTCGAGTAAAATCCCATTTGGGTTATTCTCTCAATTCCAATCAAATGCAACTGGATCTAATATAGT >Masdevallia_picturata TATGATGGGACCAAATCTCATCAATTTATTTCAACACTTGATCATCATACAGATACTTTTTT--TTTAATGTAATATGATATATG-----TGGCCTTTCCGAAAACAAATGGAAGAGTTGTTTTGTTATGTATGCCGATGCATAATATACGCATTAATGAAGCATGTATATGCGGTTATAGCTTAATCAATGAAATGATTAAATTAAAAATGATCAGCAAATCTTTTTTGAAAAATCTTTGAAATAGAAACTCAATGTATCTAACCAATTCTTCCTAATGGTTCCTATCGAAATGCTGCTAGTTGATGAAAGTTACTTCAGGATCAAGCAATAAAAGTCGAGTAAAATCCCATTTGGGTTATTCTCTCAATTCCAATCAAATGCAACTGGATCTAGTATAGT >petA:psbJ >outgroup ---------------------------------------------------TCTAGAGATTCCTTAGAATGATGTATGATTCAAAAAATTCTATAAGTCCTTTCTTTGTTT--------TTTATACTCTTTTTTTTTTTGCGGGATGTCTGAAACTCATTACTTGTATAGCATTCCTAATAATAGAAAATAAGCATACAAATACAAAGGAATAGAATACAAGGCAAGGACGGGAAAAATGAAAGGAAAAAAAGATTTCTAGAAAGTATTCTTAGTCTTCCTAATCTTCTATTC-----GATACAAGACGACACAAGAAAAGGATTTTCTTGTGTCGTCTTGTATCGAATAGAATCATGATTTTT-CTCCTGTTCGCCAAAGATTCTTATTCCTTGT----TTTCTTTTCCGGGTATAATTGAACAAATAGAACTTCTTCAATTATTCAATTAACTTCAACTTATAACTTAGGAAAATGATTCAAACAAAAAAAGACTT------TTTTGTTTCGGCTGAAAAGCAGATGAGATCTTTACGCATATCCAAATCCTACTTTCTTATCTCATTACAGTTTTCTTTTCTATTTCTATAGATTTCTATCTAGATATAGAAAATCTAGGGTTTTTCTTTTTATTATTCATTTGAGTTTAATAG----AAATAGTTGAGTATAAAAAGAAAAGGATTTGCAGGATGTTTCATACGGATAAATCCATACGTATTGGATTATTCA----------------------GGATTCCTCCTTTCTTGTTGCTTCATATTCAAAATATTGACATAATAGTGAATAGTATGT-AGGAACGACAGAAACTATGAATCAGTCAATAGATTCAATTCTTCAAAAACATT---------ATAAGAAAAAAAT-GAATAGAGTG------AACATCAGAACAAAGGATCCGTTTTGTCATTTCTGCAAATAAAATATTTGGATTCTGTTGATTGAGGTTCCATATGTTTTGGAATAGATCAAAGTCTCGCTCTAAGAGTAAGAACTCCGCGGGGCCTTACCCCGCGGAGTTCTTACTCTTTCATGTCTACAATCTAATCTAGTTCATATGATTATTACAGTA >Masdevallia_coccinea TATTTCTAGATCTAGAGATTCCTTAAAATAAAGTTGGTAAAAGTGCCAAATTATTGTTGATCAATAGAATGATATATGATTCAAAAAATTCTATAAGTCTTTTTTTTGTTTTATTTTTTTTTTTACTCTTTTTTCTTTTGCGGGATGTCTTAAACTAATTACTTGTATACCATTTTTAATGAGAGAAAATAAGTATACAAATATAAAGGAATACAATAAAAGGCAAAGACGGGAAAAATGAAAGTATAAAA-GATTTATAGAAAGTATTCTTAGTCTTACTAATCGTCTATTCAATTTGATACAAGACGACACAAGAAAATCCTTTTCTTGTGTCGTCTTGTATCGAA-AGAATCCTGATTTTTTCTCCTGTTTGCCAAAGATTCTTATTCCTTATTTATTTTATTTTTCGGGTATTATTGAACAAATAGAACTTCTTCAATTC--------ACTTCAACTTATAACTTAGGAAAAGAATTAAGAAAAAAAAAGACTTATCTTGTTTTGTTTCGGCTGAAAAGCGGATTAGATCTTTACGCATATCCAAATCTTTCTTTATTATCTCATTACAGTTTTCTTTTTT----------------------------------------TTTTCTTTTTATTATTTGTTTTAGTTTAGTAGAAAGAAATAGTTGAGTAGAAAAA-AAAAGGATTTGCAGGATGTTTCATAGGGATAAATCCATACGTATTGGATTCTTCCTAAAATCGTTCATAAAATTGACGGATTCCTCCTTTCTTGTTGCTTCATATTCAAAATATTGACATAATAGTTAATATTATGTTAGGAATGACAGAAACTACGAATCAGTCAATAGATTAAATTCTTCAAAAACATCCTAATAAAAATAAAAAAGGAATAGGATAGAGTGGTTTGAAACATCAGAGCAAAGGATCCATTTTGTCATTTCTAAAAATAGAATATTTGGATTATGTTGACTGAGATTCCATATGCTTTTGAATAGATCAAAGTATCGCTCTAAGAGTAATAACCCATCGGGGCCTTACCCCGCTGAGTTATTACTCTTTCATGTCTACAATCTAGTCTAGTTCATATGATTATTACAGTA >Masdevallia_picturata TATTTCTAGATCTAGAGATTCCTTAAAATAAAGTTGGTAAAAGTGCCAAATTATTGTTGATCAATAGAATGATATATGATTCAAAAAATTCTATAAGTCTTTTCTTTGTTTA--TTTTTTTTTTACTCTTTTTTATTTTGCGGGATGTCTTAAACTAATTACTTGTATACCATTTTGAATGAGAGAAAATAAGTATACAAATATAAAGGAATAGAATAAAAGGCAAAGACGGGAAAAATGAAAGTAAAAAA-GATTTATAGAAAGTATTCTTAGTCTTACTAATCGTCTATTCAATTTGATACAAGACGACACAAGAAAATCCTTTTCTTGTGTCGTCTTGTATCGAA-AGAATCATGATTTTTTCTCCTGTTTGCCAAAGATTCTTATTCCTTATTTATTTTATTTTTCGGGTATTATTGAACAAATAGAACTTATTAAATTC--------ACTTCAACTTATAACTTAGGAAAAGAATTAA--AAAAAAAAGACTTATCTTGTTTTGTTTCGGCTGAAAAGCGGATTAGATCTTTACGCATATCCAAATCTTTCTTTATTATCTCATTACAGTTTTCTTTTTT----------------------------------------TTTTCTTTTTATTATTTGTTTTAGTTTAGTAGAAAGAAATAGTTGAGTAGAAAAATAAAAGGATTTGCAGGATGTTTAATAGGGATAAATCCATACGTATTGGATTATTCCTAAAATCGTTCATAAAATTGACGGATTCCTCCTTTCTTGTTGCTTCATATTCAAAATATTGACATAATAGTTAATATTATGTTAGGAACGACAGAAACTACGAATCAGTCAATAGATTCAATTCTTCAAAAACATCCTAATAAAAATAAAAAAGGAATAGGATAGAGTGGTTTGAAACATCAGAGCAAAGGATCCATTTTTTCATTTCTAAAAATAGAATATTTGGATTATGTTGACTGAGATTCCATATGCTTTTGAATAGATCAAAGTATCGCTCTAAGAGTAATAACCCATCGGGGCCTTACCCCGCTGAGTTATTACTCTTTCATGTCTACAATCTAGTCTAGTTCATATGATTATTACAGTA >psbJ:psbL >outgroup TCCCCCCTTCTTTTTCATCAAGTGGTCATGCTAGAGACAAAAACAGTCATGGATAATTATGAGGATAGTATCCTTCCGAATGGGATAAGAGAATTCCTACTATCACTAT-TTCTTTTTC >Masdevallia_coccinea TCCCCCCTTCTTTTTCATCAAGTGGTCATGCTAGAGACAAAAACAGTCATGGATAATTATGAGGATAGTATCCTTCCAAATGGGATAAGAGAATTCCTACTAGTACTATGTTCAATTTC >Masdevallia_picturata TCCCCCCTTCTTTTTCATCAAGTGGTCATGCTAGAGACAAAAACAGTCATGGATAATTATGAGGATAGTATCCTTCCAAATGGGATAAGAGAATTCCTACTAGTACTATGTTCGATTTC >psbE:petL >outgroup CTGAGCTCCACAAATTATTGTACGTTCAAAAAAAGAAGGCGGGCCGATTCCGTGAAAGATGGAATCAGTAAATCTAAAAACTACTGATACTGAATCTTTGTGAGATCGTCAATTTTGTACCAAAGGTGTATTTAGAGTAGACCAAATCAGTATAGCTATCCTTCCTCTAGCGCAGCAACGCAGTCTCGATCAGTACCGAAAGGAAATG------CTATATCTTCCTTGTCTATGTATAAATGTATTTTCCTTAGAATAT-AAGAATATAAGATTAAGTAAGGTTTACATTAGTGGCTTCGTCATAGTAATG---------GAAAGTAAAGATCTTGAATGGATGGGCTCTAATAAGTAATGAGAGATATCATGATTGAAAGATCTCATTATATTCATACAATTCCATTATATGTTATATTAAATATAGAAACCCCTTTTGTTG-----TTGATATTTTATTTTTTTGAAAAATTTCATTTTATTCAAGTAATTGGTAATTGGTCGTTCATACAATAAATATACTAATACTATTTCACTTTGAACTTATTAACTTAACTTATAAACTAAAGAAAAAAAAAACATAGATCGTTGGAACAATCCATATTCATGATGCAACTGTTGTTACATTAGATCCCCCCAAGAGTTCTTTCCTTATGGAACTACAATACAAAACAAGTATGGGATTCTTTAATATGGAAAGAAAGAATATAGAACCTATAAAGGGTAATGGAAGTTGCTCTTCTTTGAATCGAGTTGGGCCCGAAATCAAATTCAAATAAAGAAATAAAATCAAATAAAAATCTTA-AATAATTTGCAATTTTTTTGAAAAAGTCAAGGTTTTCTTTTTTTTTTGATAGATCGTGGGGCAATTTTCCTCTTTCCAAATCTAATGGGCAACCAACCTATTATATTAAAGAGAATATCAAGCCCTTAGATCAAAAATGGATTAGATCCATTGAAAAAGAAATGATCAAAATGTAGGTTATTTTCAAATTCAATTCTTTTATTATATTACAAAATTACTTAAACTGAAATAGAATTCCGTTTTGGAATATTGCAAATATTCGCAATCACAGGATCGGTCAATGGCACAGCTAATGAATCCCTTTATTCTACCTATATCACCTTATCTATCTTTTCTCTTTTTTTTAGTGTCCGTCTATAATGACTGATGAATCAAGAACTTTCAATTGGAACTAAACGAATTCTTTCAATTAGTTTTTCTTACCGTCGTATCTGGATTGAGACTTAGGTAAATGTTTTATTCATATATGTAGTAAAAGAACATATCTCATTTTGCTCTTTC >Masdevallia_coccinea CTGAGCTCCACAAATTCTTGTATGTTCAAAAAAA-AAGGCGGGCCGATTCCGTGAAAGATGGAATCAGTAAATCTAAAA-CTACTGATACTGGATCTTTGTGAGATCGTCAATTTTGTACCAAAGGTGTATTTAGAGTCGACCGAATCAGTATAGCTATCCTTCCTCTAGCGCAGCAACGCAGCCTCGATCATTACCGAAAGGAAATGTTATTGCTATATCTTCCTTGTCTATGTATAAATGTATTTTCCTTAGAATATTGAGAATATAAGATTAAGTAAGGTTTATATTAGCGGATTCATCATAGTAATAGAAGTAATAGAAAGTAAAGATCTTGAATGGATGGGCTCTAATAATTAATGAGAGATATCATGATTGAAAGATCTCATTATATTCATATAATTCCATTATATTTTATGTGAAATCTAGAAAACCCTTTGGTGGTTCGGTTCATATTTTCTTTTTTTGAATCCTCTCGTTTTATTCAAGTAATTGGTAATTGTTCGTTCATAGAATAAATATGCTAATACTATTTCACTTTTAACTTCTAAACTGAAGCTAT----TATTACTATTCTAAATAGTAATTATTAGAA---------------ATGGAAATTCTG----ATTACTATCCCTATCTATTTAATTCTTTA-----CTATTT-------CATTTTTA--ATTGGTTAAT-TGGAATTAATATA-ATAGAAT-TATATTTCCTATTTTTTATTATTCTTTTTTATATTTATTTCTATTTAGTATTTTTAATATTTGTGAAAAGAAAAAAAAAAGAGATCGTTGGAATAATCCATATTCGTGATGCAA----------CTATTATTACATTAGATCTACCCAAGAGT--------TCTTTCC-----TTATGG-------AACTACAATACAAAACAAAG-ATGGGATTCTTTAAT-----ATGGTTAAAGAATATAGAACTTAAAAGGGT---AATAGAAGTGGCTCT----------TCTTT-----------AAATCGAGTTGGCCCGAAAGAAAATTCAAAT--GAAAATTTTCAATAATTTTCAATT---------------------------------TTTTTTTCAA-------------GTCAAGGTTTTCT-TTTTTTTTAGTGTCCGTCTATAATGACTAATGAATCATTAACTTGAAATTGGAACTAAATGAATTCTTTCAATTAGTTTTTATTACCGTT------------AGACTTAGGTAAATGTTTTCTTCATATATGTAGTAAAAGAACATATCTAATTTAGCTATTTC >Masdevallia_picturata CTGAGCTCCACAAATTCTTGTATGTTCAAAAAAA-AAGGCGGTCCGATTCCGTGAAAGATGGAATCAGTAAATCTAAAA-CTACTGATACTGGATCTTTGTGAGATCGTCAATTTTGTACCAAAGGTGTATTTAGAGTCGACCGAATCAGTATAGCTATCCTTCCTCTAGCGCAGCAACGCAGCCTCGATCATTACCGAAAGGAAATGTTATTGCTATATCTTCCTTGTCTATGTATAAATGTATTTTCCTTAGAATATTGAGAATATAAGATTAAGTAAGGTTTATATTAGCGGATTCATCATAGTAATAGAAGTAATAGAAAGTAAAGATCTTGAATGGATGGGCTCTAATAATTAATGAGAGATATCATGATTGAAAGATCTCATTATATTCATATAATTCCATTATATTTTATGTGAAATCTAGAAAACCCTTTGGTGGTTCGGTTCATATTTTCTTTTTTTGAATCCTCTCGTTTTATTCAAGTAATTGGTAATTGTTCGTTCATAGAATAAATATGCTAATACTATTTCACTTTTAACTTCTAAACTTAAGCTAT----TATTACTATTCTAAATAGTAATTATTAGAATAGTAATTATTAGAAATGGAAATTCTG----ATTACTATCCCTATCTATTTAATTCTTTA-----CTATTTACTATTTCATTTTTC--ATTGGTTAAT-TGGAATTAATATA-TTAGAAT-TATATTTCCTATTTTTTATTATTCTTTTTTATATTTCTTTCTATTTAGTATTTTGAATATTTGTGAAAAGAAAAAAAAA---GATCGTTGGAATAATCCATATTCGTGATGCAA----------CTTTTATTACATTAGATCTACCCAAGAGT--------TCTTTCC-----TTATGG-------AACTACAATACAAAACAAAG-ATGGGATTCTTTAAT-----ATGGTTAAAGAATCTAGAACTTAAAAGGGT---AATAGAAGTGGCTCT----------TCTTT-----------GAATCGAGTTGGCCCGAAAGAAAATTCAAAT--GAAAATTTTCAATAATTTTCAATT---------------------------------TTTTTTT--------------------------------------AGTGTCCGTCTATAATGACTAATGAATCATTAACTTTAAATTGGAACTAAATGAATTCTTTCAATTAGTTTTTATTACCGTT------------AGACTTAGGTAAATGTTTTCTTCATATATGTAGTAAAAGAACATATCTAATTTAGCTATTTC >petL:petG >outgroup ATGAATGAAATTTCATAAA-AATTTACAAAAATAAAAACCAAAGCCTCTC--CGAATATTTCATTTCATGTATTCTATGGTTCCTTCCCGCGTCAATTGCCAATTCCTAGTCATTGAGATTCACGTATAATTAAGATTAATATTTAGGGATAGATCTTACCTCTCTTTTTATTCCCTAAAACAAATTGAA >Masdevallia_coccinea ATGAATGAAATTAAAGAAACAATTTCCAAAAATAAAAATCAAAGCCTCTCACAGAATATTGAATTTCAGGTATTCTATGGTTCTTTACCGCGTCAATTGCCAATTCCTGGTCATTGAGATTCACAGATAATTCAGATTAATATTTAGGGATAGATCTTACCTCTCTTTTTATTCCCTAAAA-AAATTGAA >Masdevallia_picturata ATGAATGAAATTAAAGAAACAATTTTCAAAAATAAAAATCAAAGCCTCTCACAGACTATTGAATTTCAGGTATTCTATGGTTCTTTACCGCGTCAATTGCCAATTCCTGGTCATTGAGATTCACGGATAATTCAGATTAATATTTAGGGATAGATCTTACCTCTCTTTTTATTCCCTAAAA-AAATTGAA >psaJ:rpl33 >outgroup TGAATTCTTGTATTTATATGTGAAGAAATGAAGAAGATTTTAGATACAATTCTACGTAACATGGCTCCAATTTCGCTCCCTTTTTCTTTCCTATCCTAAAGAAAAAAGAAAGAGAAAGAAAAGGTGTATCGAACCTCAGTCAAAATATAGTGAATCTACGATAGAATTTTTGGGAAAAGAAATGGAAATGTGAATCCAGTCTAGGGGCGCGAAATTCTAACATAGAAAGAAGAAAATACTTAGATTAGGATAGGAATAATTCCTAGTTAGAAAAAATTGTATTACTTAATTATTACTATATTCTGAATATTCTTCTAT------------------------------ATAAT---------------------------------------------------GAATT------------AAAAAAAAATATTTACAAATTACATTTCTAGTTAGTAACTTTTATTAATATAGAT--ATAGAATATAGATTCTTTTATTTTCTTCTTATTTCTTATTTTATTTTGTATTTGGTTCGGATAAAAAAGAAAATGAGGGGAATTCTAAAGTGAAGTCGATACAAAATGAAAAGGAGGTTC >Masdevallia_coccinea TGAATTCTTGTATTGATCTGTGAAAAAATGAAGAATATTTTAGATACAATTCTACGTAACATGGCTCCAATTTTTCTCCCTTTTTCTTTCCTATTCTAAAAAAA--------AAAGAGAAAGAGTGTATTGAACCTCAGTCAAAATACAGTGAATCTACGATAGTATTTTTGGGAAAAAAA--GTAAATGTGGATTCAGTCTAGGAGCGCAAAATTCTAACATAGAAAGAAGAAAATACTGAGATTAGGATAGAAATCATTCCTAGTTAGAAAAAATTGTATTAATTAATTATTACGATATTCTTAATACTCTTCCATTAATGAATATAAATCTTTTTCTTTTTAATTATAGTAGAGTAATTCATAGTAATTCTATTTTATATTAGAGTACTTCGAAGTCATTCGAATTATAATAATTAGAAAAAGAAAATATTGAAAAATTCCATTTTGAGTTATTAACTTTTAGGAATATTTATTAATATAGTATAGATAGATAATCTAGATTCTTTTTTTTTTTTATTTTCTTTGGTTGGTTCGGATAAAAAAGAAAATGAAGAGAGTTCTAAAGTGAAGTCGATCCAAAAGGAAAAGGAGGTTC >Masdevallia_picturata TGAATTCTTGTATTGATCTGTGAAAAAATGAAGAATATTTTAGATACAATTCTACGTAACATGGCTCCAATTTTTCTCCCTTTTTCTTTCCTATTCTAAAAAAAAAA-AAAGAAAGAGAAAGAGTGTATTGAACCTCAGTCAAAATACAGTGAATCTACGATAGTATTTTTTGGAAAAAAA--GGAAATGTGGATTCAGTCTAGGAGCGCGAAATTCTAACATAGAAAGAAGAAAATACTGAGATTAGGATAGAAATAATTCCTAGTTAGAAAAAATTGTATTAATTAATTATTACGATATTCTTAATACTCTTCCATTAATGAATATGAATCTTTTTCTTTTGAATTATAGTAGAGTAATTCATAGTAATTCTATTTTAGATTATAGTACTTCGAAGTCATTCGAATTCTAATAATTAGAAAAAGAAAATATTGAAAAATTCCATTTTGAGTTATTAACTTTTAGGAATATTTATTAATATAGTATAGATAGATAATATAGATTCTTTTTTTTTTTT--TTTCTTTGGTTGGTTCGGATAAAAAATAAAATAAAGAGAGTTCTAAAGTGAAGTCGATCCAAAAGGAAAAGGAGGTTC >rpl33:rps18 >outgroup TGGAACAGAATGCATGTGTGATTTTTCCAAGGGGCGGGAAGAGTAAGAACTTTACATCTTAACATATATAATACAA----------ACCAAATCCTATTTTGGTCGGATCTGAA-----ATGAATAAGAAAAAAT--TAGAATTGTATTTTCTAGATTATTTTCTATATAAGGA----ATAAACAAACAAGGAATAAGAAAACC >Masdevallia_coccinea TGGAACGGAATGCGTGTGTGCTTTTTCCAAAGAGTGGGAAGAATAAGAACTTTACATCTTAACATATATAATACAATATAATACAAACCAAATCCTATCTTGGTCGAATCTTAACTTAAATGAATAAGAAAAAAA--TAGGATTCTATTTTATAGATTATTTTATATATAAGGAAGGAATAAACAAACAAGGAATAAGTAAACC >Masdevallia_picturata TGGAACGGAATGCGTGTGTGCTTTTTCCAAAGAGTGGGAAGAGTAAGAACTTTACATCTTAACATATATAATACAA----------ACCAAATCCTATCTTGGTCGAATCTTAACTTAAATGAATAAGAAAAAAAAATAGGATTCTATTTTATAGATTATTTTATATATAAGGAAGGAATAAACAAACAAGGAATAAGTAAACC >rps18:rpl20 >outgroup TATACTCCTCAAAACTCCAATCAGAATTCAAGCTCAGATTAATGTTTTGCTC-AAAAAAACTAGAATCCAGATTTGATTCTTGTGTTATAAAAAAGGAAAAATGGGGAAGAAATCTTTTTTTTTCTTGAAAGATGTTCGTTTATTCCTACTATTCAAATCTTAATTT--TTTTCTTCTATCTTCCCGGAGTCCATTCTCCGGGAAATTCTGTTTCAATCATTCTTGTTTCCTATATAGTAGATTCTA >Masdevallia_coccinea ---------------------------------------------------------------------------------TAGACTCCTCAAAACTCCAATCGGAACTCAAGC---TCATATT-------AATGTT---TTGCTCGAAAAA--AAAATATGAATTTATTTTTCTTCTATCTTCCCGGAGTCCATTCTCCGGGAAATCCTGTTTCAATCATTTTCGATTCA-ATTTCTT-------- >Masdevallia_picturata TAGACTCCTCAAAACTCCAATCGGAACTCAAGCTCATATTAATGTTTTGCTCGAAAAAAAATAGAATCCATAATTTATTCCTGTATTCTAAAAAAGGAAAA-TGGGGAAGAAAT---TCTTTTTCTTGAAAGATGTTCGTTTCTTCCTACTACTAAAATATGAATTTATTTTTCTTCTATATTCCCGGAGTCCATTCTCCGGGAAATCCTGTTTCAATCATTTTCGATTCA-ATTTCTT-------- >rpl20:clpP >outgroup GAATCAAATGAAACTTTCTTGAATAACTAATTGATTTCTCTTCTTTCAGTCATCCTTTTCCTCCGGTCGATTAATAACAAAACGGATTCTTCCAATATATAAAATATAAATTCCAATGGCTTTTGCGACTATGACCTTCCCGACCACGATTTTTTCTTTCTTCCAGGTATCTTATCTCGCCTGGAAATAAGAAATTCAACTGCTACTAAATAAAAAAGAATAGTGGGTTCCCTCGTTTTTATGGCAACTTTTGAAACGGTGAGGTCCTCTCTATACACCGGAGCCTCTTCTTTCATTTCATCAAATTTTATTGTGAACTTGTATAGTTCACACTCTTTGGCTCTACCCATTCATTTTTCAATTAGAATTCTTTTTTA---------------AATTCTAATTAGAAAGTAATAGTACTTTTCACAAAAA--GCTATCCATACAGTGACGGCATTTAATTCTGAAAGTTGGCTAGGTAGCTGACCCTGTTAGTCCGTTTTTT----CAAAAATAGGAGCATAACCTTTTTGCTTCTTATAAGACTATTTCCTCCGCTTAATGGATAACTATTTGCTACCAATGGAGAATTGCTTCTCATCTCAAACGGAGTGATTGGATTTGCACCAATAGAAACCATAAATTCCATAACATAAT-ACGTAGATGATAGATCATCATTTTTAGATAAGAGTCAATTAAATACCCGTCTTCCACTCTATCTATCCTAATTCGTTGGTAGTGGTCGTTTATACTGGAAAAAATTTTTTCATTTCTTCAAACTAATGATCTGAACTGAACGAGTCGCACATACACCCTAGTACATGTTCCTCGACGCTGAGGACATCCTCGAAGAGCGGGAGATTTCGTGACATTTCTTATTGGCTGTCTTGCGTTTCTAATAAGTTGTTTAATGGTTGGCATGTTATGTCTATAGAATCTCATTCTAGATAGAATAGAGCGGGTTGGCTTAGATCGATCTTAACCTGATGGTTGATTATTATGAATGATTTCTATTCACACAGAAAATTCAATTTTTGAAATGGAATTC-TATAT >Masdevallia_coccinea GAATCAAATGAAACTTTCTTGAATAACTAATTGATTTCTATTCTTTCAGTCATCCTTTTCCTCCGGTCGATTAATAACAAAACGGATTCTTCCGATATATAAAATATAAATTCCAATGGCTTATGCGACTATGACCTTCCCGACCACAATTTTTTCTTTCTTCAAGGTATCT-----CGCCTGGAAATAAGAAATACGACTGCTACTAAATAAAAAAGAATAGTGGGTTCCTTCGTTTCTATGGCAACTTCTGAAACGGTGAGGTCCTCTCTATACACCGGAGCCTCTTCTTTCATTTCATCGAATTTTATTGTGAACTTGTATAATTCACACTCTTTGGCTCTACCCATTCTTTTTTCAATTAGAATTCTTTTTTTTTT-----------CAATTATAATTAGAAAGTAATAGTCCTTTTCACAAAAAAGGCTATCCATACAGTGACGGCATTTCATTATGAAAGTTGGCTAAGTAGCTGACCCTGTTAGTCCGTTTTTTTTT-CAAGAAAAGGAATAGGAGCAT-------------AACCTTTTTCCTCCGCTTAATGGATAACTCATTGTTACCAATGGAGAATTCTTTCTCATCTCAAACGGAGTGATTGGATTTGCACCAATAGAAACCATAAATTA-ATAACCTAATTAGGTAGATGATAGATCTGCATTTTTAGATACTAGTCAATTAAAAAGCCGTCTTCCACTCTATCTATCCTAATTCATTGGTAGTGGTCGTTGATACTGGAAAAAAAATTTTCATTTCTTCAAACTCATGATCTGAACTGAACGAGTCGCACATACACCCTAGTACATGTTCCTCGACGCTGAGGACATCCTCGAAGAGCGGGAGATTTAGTGACATTTCTTATTGGCTGTCTTGCGTTTCTAATAAGTTGTTTAATGGTTGGCATGGCGTGTCTATAGAATCTCATTCTATATAGAATAGAGCGGGTTGGTTTAGATCGATCTTAACCTGATGGTTGATGATTATGAATGATTTCTATTCACACGGAAAATTAGAATTTTGAAAAGGAATTCGTATAT >Masdevallia_picturata GAATCAAATGAAACTTTCTTGAATAACTAATTGATTTCTCTTCTTTCAGTCATCCTTTTCCTCCGGTCGATTAATAACAAAACGGATTCTTCCAATATATAAAATATAAATTCCAATGGCTTATGCGACTATGACCTTCCCGACCACAATTTTTTCTTTCTTCAAGGTATCT-----CGCCTGTAAATAAGAAATACGACTGCTACTAAATAAAAAAGAATAGTGGGTTCCTTCGTTTCTATGGCAACTTCTGAAACGGTGAGGTCCTCTCTATACACCGGAGCCTCTTCTTTCATTTCATCGAATTTTCTTGTGAACTTGTATAATTCACACTCTTTGGCTCTACCCATTCTTTTTTCAATTAGAATTCTTTTTTTTTTTTTTCAATTATCAATTATAATTAGAAAGTAATAGTCCTTTTCACAAAAAAGGCTATCCATACAGTGACGGCATTTCATTATGAAAGTTGGCTAAGTAGCTGACCCTGTTAGTCCGTTTTTTTTTTCAAGAAAAGGAATAGGAGCAT-------------AACCTTTTTCCTCCGCTTAATGGATAACTAATTGTTACCAATGGAGAATTCTTTCTCATCTCAAACGGAGTGATTGGATTTGCACCAATAGAAACCATAAATTA-ATAACCTAATTAGGTAGATGATAGATCTGCATTTTTAGATACTAGTCAATTAAAAAGCTGTCTTCCACTCTATCTATCCTAATTCATTGGTAGTGGTCG---------GAAAAATTTTTTTCATTTCTTCAAACTCATGATCTGAACTGAACGAGTCGCACATACACCCTAGTACATGTTCCTCGACGCTGAGGACATCCTCGAAGAGCGGGAGATTTAGTGACATTTCTTATTGGCTGTCTTGCGTTTCTAATAAGTTGTTTAATGGTTGGCATGGCGTGTCTATAGAATCTCATTCTATATAGAATAGAGCGGGTTGGTTTAGATCGATCTTAACCTGATGGTTGATTCTTATGAATGATTTCTATTCACACGGAAAATTCGAATTTTGAAAAGGAATTCGTATAT >clpP:psbB >outgroup AAGATAAATAAAAAAATGAAGTGCTATACTTTACTTTAATATGGAAACGTAACAATGGCTTTATTGTCTTCATCATTTTTTCTCTTTCTTTTCTATTTTTAGATTCTATATTCTTTTTTCTTCTTTTTCTATTATTAGATATTTAGTATTAGATTTTTCTATTTTATTTTCTATT-TCTATTTTTCTATTTAGAATTTATATTTATTTATATTCTAATATTCTATAGAATCTCTATTCTATATATTTTTTTATATCTTATTTTCATATCTATATATCTATATCTTACATATATTTATATTATATTCTACTTAAGTATATATATTGTATATATATTCTATTATTATATTCTTATCTATATTCTACTTACCTTACTTATATACTTCTATAGAAATAGAATATTTAGATATTCTAATATATTCTATTATTATTATATATTCTATAAATTAGCAAATTCTAAGTTAGAATAGAAATTCTTCTCTTTTTCTATCTTAGAATCTTATTTTTAATCTTCTATTCTATATATTATAGAAATATAGAACTTAATATTATTATTCTTATTATATAGATTCTAATTTAGATATAGTATAATACTATAATTATTATATAGTATATAGATATATATAGAATATAGACTGGAAGGACTGAAAGGTTCGTAGAGTAAGACAGAATGAATAAAGAAAAATTGGAACGAACGGGATCGATCGGATCAGCCAATTGTTCGAATGATTTCGAATTATAAACAACTATCTATGCATTCTTTCCCCCAAAATCCTCCCATTGCGTATTGGTACTTATCGGGTATAGAATAAGATCTGTTTCTCTTTGTTCTTCTAAATATAAATAAAGAAAATAAATAGAATTGTTCCCTTCTCTTTCAAATTCTTTCTATTCTATTTCATTCAAAATAAAAGAAGGGAATACAAATCAATATTAATCCTTTCCTATACAAAATCTACCGAACAGGTGAAGTACACGGTCT-AGTCTTTTCCAATGCGATAAAGTTACATAATGTCTATTTCTTTTTCAGAAAGGGGTATTTAC >Masdevallia_coccinea AAGATAAA--AAAAAATGAAGTACTATACTTTACTTTAATATGGAAACGTAACAATGGTTTTATTGTCTTCATCCTTTTTTCTCTTTCTTTTATCTTTGTATATTTTCTATTATATATATATAT----------CTATATTTTT-----TAGATATTT----TTTCTTTTCTATCCTCTATTCTACTATTA----------------------CTACTATTATT---ATTATCTATTCTAT------TTTTATATCTTTTAATCTTCTTTCTATTTCTAT---TTAGA-------ATCTTCTATTCTATCT----------ATTATATAAATAAAATAGAACT---------------------TCATATTATTTATCTAGATCTATCTAAATAGA-----TAGAT--TCTAAT--------------------------------------TTCTAATTTAGAATA----TTAGTATCTATATCTAATTTAGA----TATTAGTATCTATCTAT---ATATATC-------------------------TATCTATAT-GTATAGAT--------AGATAT-ATGTA----TAGACTTTCTATTTTATATATATAGATAGATAGGATATAG--------GACTGGAAGGTTCATAGAGGAAGACAGAATGAATAAAGAAAGATTGTAACGAACGGGATCGATCGGATCAGTTGATCGATCAAATTATTTCGAATTCTAAAAAAGTATTTATACATTTTTTCCCTCAAAATACTCCCATTGCGTATTTGTACTTATCGGGTATAGAATAAGATCTGTTTCTCTTTGTTCTTCTAAATAGAAAGAAAGAGAATGGGTC---CCTTCTCTTTCTATTTCAAATTCTTTCTATTCTATTTCATTAAAAATAAAAGAAGGGAATACAAATAAATATTAACCCTTTCCTATACAAAATCTACTGAACAGGTGAAATACACGGTTCGAGTCTTTTCCAATGCGATAAAGTTACATAATGTCTATTTCTTTTTCAGAAAGGGGTATTTAC >Masdevallia_picturata AAGATAAA--AAAAAAGGAAGTACTATACTTTACTTTAATATGGAAACGTAACAATGGTTTTATTGTCTTCATCCTTTTTTCTCTTTCTTTTATCTTTGTATATTTTCTATTCTATATATATATATAGATATATCTATATTTTT-----TAGATATTT----TTTATTTTCTATCCTCTATTCTACTATTCTTTATTTTCTATCCTCTAT--TCTACTATTCTT---ATTATCTATTCTAT------TTTTATATCTTTTAATCTTCTTTCTATTTCTAT---TGAGA-------ATCTTCTATTCTATATTC---TATATATTAGATAAATAAAATAGAACT---------------------TCATATTATT-ATATAGATCTATCTAAATAGA-----TAGAT--TCTAAT--------------------------------------TT-------AGAATA----TTAGTATCTA-----------GA----TAT------------AT---ATATATA-------------------------TATCTATAT-GTATAGAT--------ACATATTATGTA----TAGACTTTCTATTTTATATAGATAGATATATAGGATATAG--------GACTGGAAGGTTCATAGAGGAAGACAGAATGAATAAAGAAAGATTGTAACGAACGGGATCGATCGGATCAGTTGATCGATCAAATTATTTCGAATTCTAAAAAAGTATTTATACATTTTTTCCCTCAAAATACTCCCATTGCGTATTTGTACTTATCGGGTATAGAATAAGATCTGTTTCTCTTTGTTCTTCTAAATAGAAAGAAATAGAATGGGTC---CCTTCTCTTTCTATTTCAAATTCTTTCTATTCTATTTCATTAAAAAGAAAAGAAGGGAATACAAATAAATATTAACCCTTTCCTATACAAAATCTACTGAACAGGTGAAATACGCGGTTCGAGTCTTTTCCAATGCGATAAAGTTACATAATGTCTATTTCTTTTTCAGAAAGGGGTATTTAC >psbB:psbT >outgroup -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAAATTCCCTTGCCATCTTTTGCCTCTATTTTTTTTTATGTCTAA--ATAGATATAAATAGAATAATATAGAAAAATTAGAAATGAAATAGAATAAGAATA--------ATACA-----ATAGAAATATAGAAGAAATAGAACAATAATAGAATAATAATATAGAATAGTAATAAGATAAGATATGACTATAACTATATTACTATATAGAATCTAT------TATATATATACTATATAATAGATTCTATATA-GTAATAG--TAAATAGTAAATTGAGATTTACTATTTATTTAGTAAATGATCCAAAATGAATAGGTGTGGAAGCTATAATTGTAAACCACGATCGAATCT >Masdevallia_coccinea ACAAAATTTATTTGCCATCTTTTGCCTCTTATTTTTTTTATTTTATTCTAGTATTTTTTTATTCTAGTATTTATAGTTCTAGTATTTCGAGTATAGAAGTTTAGATATATATATAGAGTATTTAGCTATTTAGTATTTCTAATTTGTTAATTTCTATAATGAATTGAATCTATTATCTATTTCATATTCAAGATTTCTATTTTCTATATTAATTCTTTCTAAAATTATTTAAAATTATTGAATTATTTAGATTTATATAATTATAATTATTGAGTATTTAGATTTAGATATTAATCTAATATACTAATATCTAAATCTATAAGAAATCTAATAA--ATAGAATAG-AATATAATA-------GTAATAAGATATGACTATATCCATAT-AGAATATAGAATCTATATAGTATGTATATCTACTATATA-TAGATTCTCTATAAGAAATAGAATAAATTGTAAATCTCAATTTAGAATTTTTTTAGTAAATTATTCAAAATGAATAGGTGTGGAAGCTATAATTGTAAACCACGAGCAAATCT >Masdevallia_picturata ACAAAATTTATTTGCCATCTTTTGCCTCT-ATTTTTTTTATTTTATTCTAGTATTT----------------AGAGTTCTAGTATTTCGAGTATAGAAGTTTATATATATATATAG--TATTTAGCTATTTAGTATTTCTAATTTGTTAATTTCTATAATGAATTGAATCTATTATCTATTTCATATTCAAGATTTCTATTTTCTATATTAATTCTTTCTAAAATTATTTAAAATTATTGAATTATTTAGATTTAGATATTAAT--CTAATA--TACTAATATCTAAATA-------GATATA----TATCTAAATATATAAGAAATCTACTAA--ATAGAATCG-AATCTAATATCTAATAGTAATAAGATATGACTATATCCATAT-AGAAT-------CTATATAGTATGTATATCTACTATATA-TAGATTCTATATAAGAAATAGAATAAATTGTAAATCTCAATTTAGAATTTTTTTAGTAAATTATTCAAAATGAATAGGTGTGGAAGCTATAATTGTAAACCACGAGCAAATCT >psbN:psbH >outgroup TTTTCGATAATTTCAAGATCACAATGGATCACGATAATGTCGTTTATTTACAACTACAACGGAATGGTATACAAAGTCAACAGATTTCAACCCATGATGAAAGAGGATTT >Masdevallia_coccinea TTTTCGATAATTTCAAGATCACAAAGGATCACGATAATGTCGTTTATTTACAACTACAACGGAATGGTATACAAAGTCAACAGATTTAAACCCATGATGAAAGAGGATTT >Masdevallia_picturata TTTTCGATAATTTCAAGATCACAAAGGATCACGATAATGTCGTTTATTTACAACTACAACGGAATGGTATACAAAGTCAACAGATTGAAACCCATGATGAAAGAGGATTT >psbH:petB >outgroup TCGTAAAAACTAGGAGGTCCTAGTTTTTCAATAAAAACAGATTATTT----------TACTTAGACTTACTTAATGCTTAAAATACTTAATACTTCAACTTAAGATTACCTAATACTTGGATTTATAGACCATTCTGGTAGTTCGATCGTGAAATTTATTTGTTTTGATATTTCATTTCCGGAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >Masdevallia_coccinea -------TACTAGGAAGTCCTAGTA----AAAAAGATTATTTTACTT-----CTATTTACTTAATGCTTATTAATGCTTAAAATACTGAATACTTCAACTTAAGATTACCTAAGACTTGGATTTATAGACCATTCTGGTAGTTCGATCGTGAATTTTATTTGTTTCGATATTGCATTTCCGGAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >Masdevallia_picturata -------TACTAGGAAGTCCTAGTA----AAAAAGATTATTTTACTTATCTTATATTTACTTAATGCTTATTAATGCTTAAAATACTGAATACTTCAACTTAAGATTACCTAAGACTTGGATTTATAGACCATTCTGGTAGTTCGATCGTGAAATTTATTTGTTTCGATATTGCATTTCCGGAATATGAGCGTGTGACTTGTTATAATTGATCCTATTTAGAATACAGAGAATGGACCTGTCATCTCTATCAAGATGATTCTACCTCGTCAGATATTTATTCTAGTCTCTGGAGCACGGACTATATAGAATAGATCAACAAAAGAAATATTTTAACTATGATTCATATCTATTATGAAAACCTCGCAACCGGATTAAAAAAAAAAGGGAAATAGGTCTTTTCTAAATCAAACAATTTTTTTCTTCATACTTCCGAAAGAAACCTCTTTCTCTCTATTTTATTGAGTTATTACATTCATTGAAGAAGTGATTATCAAATGGTTTTTACTCAGAAACCCTTTGAGTTTAGGAGTTTAGCTTTGGTTTTCTTAAATCATCGTGGTTCTAGTATGAATCTGAGGTTTCAATTAATTCATAGGGTCTCAACAAGAGAATTCCTATAAAAAAAAGATAGGGAAGAGAAGATTCAAGAGGCCTATCACGATTAACATAAAGAAAGATA >petB:petD >outgroup -------GAAGGTAGATCATAGATATTTGTAATTTATAATATAGGGGAGGAACCAGAGTCTTTCATTGCTAAAAATATGAATTATTGAAAAATAAGGCATGTTATTTGGATACTTCTCTTCAACTCTGAAGTATTCTTTATTTGATACGAATCG-----TTGAAGTATATTTTCCTAAA-GAGGATGGATT----- >Masdevallia_coccinea GAATAGAGAAGGCAGATCATAGATATTTGTAATTTATCATATCCGGGAGGAACAAGAGTCTTTCATTGCTGCAACTATGGATTATTGAAAAATAGGGCATGTTATTTGGATACTTCTATTCAACTCTGAAGTATTTTTTATTTAGTACGAATCGAATAGTTGAAGTATATTTTCCTAAAAGAGGATAGGATGGATT >Masdevallia_picturata GAATAGAGAAGGCAGATCATAGATCTTTGTAATTTATCATATCCGGGAGGAACAAGAGTCTTTCATTGCTGCAACTATGGATTATTGAAAAATAGGGCATGTTATTTGGATACTTCTATTCAACTCTGAAGTATTTTTTTTTTGATACGAATCGAATAGTTGAAGTATATTTTCCTAAAAGAGGATAGGATGGATT >petD:rpoA >outgroup CCGTGAAATACCACGACATAGGTATCTAAGGAAGATCCCCCTTCTGGATCTTCCCTAGATACATCAATCAAT----CTTATTATGATCTATTCTGCAAATATATGGATCGTGTCGGAGATTCAAAACTCATTCTATTCTTT-TTTCTTTCTAAAAACT------------------------- >Masdevallia_coccinea CCGTTAAATACCACGATATAGGTATCTAAGGAAGATCCAGAAGG-GGATCTTCCTTAGATACTTCAATCTTA--------TTATGATCTATTCTGCAAATATATGGACCGTGTCGAAGATTAAAAATTTAATCTATTCTTT-TTTATTTCTAAAAACTAAAAAATGAAAGAATTCCAATGAAT >Masdevallia_picturata CCGTTAAATACCACGACATAGGTATCTAAGGAAGATCCAGAAGG-GGATCTTCCTTAGATACTTCAATCTTATAATCTTATTATGATCTATTCTGCAAATATATGGACCGTGTCGAAGATTAAAAATTTAATCTATTCTTTGTTTATTTCTAAAAACTAAAAAATGAAAGAATTCCAATGAAT >rpoA:rps11 >outgroup GTCTTATTTTTCTTTTCTTTATGATTATTGGATCAGATCATTGAATCATTTATTTCTCTTGAAATCTCTTGAATTCTTATTT >Masdevallia_coccinea CGATTATTTTTCTTTTATTTATTATTATTGGATCAGATCATTGAATCATTTATTTCTCTTGGAATCTCTTAAATTATTATTT >Masdevallia_picturata CGATTATTTTTCTTTTATTTATTATTATTGGATCAGATCATTGAATCATTTATTTCTCTTGGAATCTATTAAATTCTTATTT >rps11:rpl36 >outgroup -------TTTTATTATATTATATTCAT---------AAGAATAAAAGAAAAATAAAGAAGAATCAGAAATCTACAGAAAGATACGCGGATATCCATTTCATATGAAAACGAATCCTTTCTTCTTTATTTTTACATG----------TACATGGGTTTTTCTTTGAAAAAGTTATTGATTTAGAACTTGAGAAGGA >Masdevallia_coccinea -------TTTTATTAGATCATATTCAT---------AAGAATAAAATAAAAAGAAAGAAGAATTAAAAATTTACAGAAAGATACGGAGATATCCGTTTCATATGAAAACGAATCCTTTCTTCTTTCTTTTTACATGTACTTACATGTACATGGGTTTTTATTTGAAAAAGTTCTTGATTTAGAACTTGAGAAGGA >Masdevallia_picturata TTTTATTAGTTATTAGATCATATTCATAAGATTCATAAGAAGAAAATAAAAAGAAAGAAGAATTAAAAATTTACAGAAAGATACGGAGATATCCGTTTCATATGAAAACGAATCCTTTCTTCTTTCTTTTTACATGTACTTACATGTACATGGGTTTTTATTTGAAAAAGTTCTTGATTTAGAACTTGAGAAGGA >rpl36:infA >outgroup TTGATCATTCCTTACCTTCATTCGGAATCTATTTTTTTTTTTT--GAAACAAAAAGAAGTTTCTTGCATTTTTGAACTTAGAATTATATCCCTACGAAAAGG-ATGTTGAAAAGAATGATCTAATCGTT >Masdevallia_coccinea TTTATCATTCCTTACTTTCATTCTGAATCTCTTTTTTTTTTT---GAAACAAAAATAAGTTTCTTGCATTTTTGAACTTCGAATAATATCCCTACGAAAAGGGATGTTTAAAAGAATGAT--------- >Masdevallia_picturata TTTATCATTCCTTACTTTCATTCTGAATCTCTTTTTTTTTTTTTTGAAACAAAAATAAGTTTATTGCATTTTTGAACTTCGAATAATATCCCTACGAAAAGGGATGTTTAAAAGAATGAT--------- >infA:rps8 >outgroup CCAGGGAACCCCCTTTAAGTATCAACTAATAGAGGAAGAGTTCTATAATTAACTT---CTCTCTATTTTACAAATAATAAGTTCGAGAGAAAATTAGGGTACC-CAGGAGAA >Masdevallia_coccinea CCAGGGAACCCCCTTTAATTATTAACTAATAGAGGAAGAGTTCTATAATTCATTTTTCCTCTCTATTTTACAAATAGTAAGTTCGAGAGAAAATTAGGGTACTTCAGCAGAA >Masdevallia_picturata CCAGGGAACCCCCTTTAATTATTAACTAATAGAGGAAGAGTTCTATAATTCATTTTTCCTCTCTATTTTACAAATAGTAAGTTCGAGAGAAAATTAGGGTACTTCAGGAGAA >rps8:rpl14 >outgroup ACGAACTATAGTTATTGGTGCCTCCTCATTTTAATATAATCAACATGCTTCTTTTTTGTTTTATTTTCATTTGTTTTTTTTTTATTCTTAAATTATCAAAAATTATTAGAAATTAAAAGTACATGCATGAGACACAATCTATTAATCGGATCTATTTCAGATATTTGAATATTCTATATTCTATTA---TTATAATTATTCTTTCTATTTATTTCTATTTTCTATATTCAAGTTTCTATATTCTAGATATATATATGTATAGAATATTATAGAAATATAGGATATATCTATCCTATTTTCAT >Masdevallia_coccinea ACGAACTATAGTTATTGGTGCCTCCTAATTTTGATATAATCAACATGCTTATTTTTTGTTTTATTTT-------TTTTTTATTATTC---AATTCTAAAAAATTATTAGAAATTTAAAGTATATGCATGAGATACAATCTATTAATTAGATCTATTTTAGCTATTTGAATATTCTATATATATCTAGATAGATAGATAGAGATAGGATATATC-CTATTTTC-AT----------------------------------------------------------------------------- >Masdevallia_picturata ACGAACTATAGTTATTGGTGCCTCCTAATTTTGATATAATCAACATGCTTCTTTTTTGTTTTATT------------------ATTC---AATTCTAAAAAATTATTAAAAATTTAAAGTATATGCATGAGATACAATCTATTAATTAGATCTATTTTAGCTATTTGAATATTCTATATATA--------GATAGATAGAGATAGGATATATC-CTATTTTC-AT----------------------------------------------------------------------------- >rpl14:rpl16 >outgroup TCATTTTTATTGTAATCTCTGATTTCAATGCAAGGGATATAGGGAAAAAGAAATATTGTCTGTCCAGAGATAAAGAAATCCGCGGTTGTTTTTTCATTCTCAATACTCCTTTCTTTTACTTTCTT------- >Masdevallia_coccinea TCATTTTTATTGAAATATCTTATTTCAATGCAAGGGATAATGGAAAAAAGAAATATTGTCTGTCCATAGATAAATAAATCCGTGGTTGTTTTTTCATTCTCAATACTTCATTTTTATTTTATTTTTGTTTAC >Masdevallia_picturata TCATTTTTATTGAAAAATCTTATTTCAATGCAAGGGATAATGGAAAAAAGAAATATTGTCTGTCCATAGATAAAGAAATCCGTGGTTGTTTTTTCATTCTCAATACTTCATTTTTATTTTATTTTTGTTTAC >rpl16:rps3 >outgroup GCAATTATACTAAAATCTCAATTAAA-----GGGTAAATCAAATTTTTATTAAACCTTATAGAATTAGAATTGTTTGTTTTTCTTTGATTAAGATAAAAA-AAAAATAAGATAAAGAGTTTCTAAATTTTTTCTATTACTAAGCAGAATTGCGAGATATAGAAAGGTCCATTATTCTTATTTTC------ >Masdevallia_coccinea GCAATTATACTAAAATATAAATTAAATGAAAGGGTAAATCAAATTTTTATTAAACCTTATAGAATT-------TTAATTGTTCTTTGATTAATAAAAAAA-GAAAAAGAAGAAAGGATTTTAGAAATTTTTTCTAGCGATGAGCAGAATGGCGATAGAAATAAAGGTCCATTATTCTTGTTTTCTTATTC >Masdevallia_picturata GCAATTATACTAAAATATAAATTAAAT-AAAGGGTAAATCAAATTTTTATTTAACCTTATAGAATT-------TTCATTGTTCTTTGATTAATAAAAAAAAGAAAAAGAAGAAAAGATTTTAGAAATTTTTTCTAGCGATGAGCAGAATGGCGATAGAAATAAAGGTCCATTATTCTTGTTTTCTTATTC >rpl22:rps19 >outgroup AAAGAAAGTTCTCCCCCGCCAATGAATGATAAGTGCCTAGGTGAAGTATAGTATAAGATAAGTCAGAAAAGTAAGAATAAGTAAGAAAAGTAGAAGTCTTAGTATACTAGAAAAATAAAATAC-TATACCTAGACTCTTACTATAAGTTACTATAAGATAAAGTCTAAGATAAAGACTCTTAAGTATAAATACTATTAAGATAAGGCTTTTCACATGAATACTTACTAGAACGA >Masdevallia_coccinea ----AAAGTTTTCCCCCGCCAATGAATGATAAGTGCCTAAGTGAAGTATAGTATAAGATAAATCAGAAAAGTC----TAAGTCTTATTAGTA------TTAGTATACTAGAAAAATAAAAGAAATATACCTAGACTCTTATTAGTAAGTCTAATAAGATAAGGCTTTTCACATGAATACTTA-GTAGAACGA------------------------------------------ >Masdevallia_picturata ----AAAGTTTTCCCCCGTCAATGAATGATAAGTGCCTAGGTGAAGTATAGTATAAGATAAATCAGAAAAGTC----TAAGTCTTATTAGTA------TTAGTATACTAGAAAAAGAAAATAAATATACCTAGACTCTTATTAGTAAGTCTAATAAGATAAGGCTTTTCACATGAATACTTA-GTAGAACGACTA---------------------------------------