#NEXUS [written Mon Mar 26 13:02:09 CEST 2018 by Mesquite version 3.40 (build 877) at 1x-193-157-253-55.uio.no/193.157.253.55] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=29; TAXLABELS 'Alcyonidium_mytili' 'Amathia_citrina' 'Anguinella_palmata' 'Bitectipora_retepora' 'Callopora_lineata' 'Celleporella_hyalina' 'Chiastosella_watersi' 'Costaticella_bicuspis' 'Cryptosula_pallasiana' 'Electra_pilosa' 'Escharoides_angela' 'Fenestrulina_sp' 'Flustra_foliacea' 'Flustrellidra_hispida' 'Galeopsis_porcellanicus' 'Membranipora_membranacea' 'Microporella_agonistes' 'Microporella_cf_ciliata' 'Microporella_n_sp_1' 'Microporella_n_sp_2' 'Microporella_ordo ' 'Microporella_sp' 'Orthoscuticella_innominata' 'Paludicella_sp' 'Rhynchozoon_zealandicum' 'Schizoporella_dunkeri' 'Scruparia_chelata' 'Umbonula_littoralis' 'Watersipora_subtorquata' ; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=434; FORMAT DATATYPE = Protein GAP = - MISSING = ?; MATRIX 'Alcyonidium_mytili' -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WFFGHPEVYILILPGFGIVSHVVSHYSQKEEVFGTVGMIYAMLSIGLLGFIVWAHHMFVVGMDVDTRAYFTSATMVIAVPTGVKVFSWLSTLNGSKLDFDTPMLWSLGFIFLFTLGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAVFSGFAYWFPLFTGVTLNTYLAKTHFYLTFLGVNLTFFPQHFLGLAGMPRRYS- 'Amathia_citrina' ---------LYFLFGLWAGMVGSGLSALVRVELSQPGGLMGNDQLYNVIVTAHAFVMIFFMVMPVMIGGFGNWLVPLMLGAPDMAFPRLNNMSFWLLPPALLLLLMSSLVESGAGTGWTVYPPLASNIAHSGSSVDMAIFSLHLAGVSSILGAINFMTTVVNMRSYSMVFVRVSLFVWSVFITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWF------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 'Anguinella_palmata' ---------LYFLFGLWAGMVGSGLSALIRAELSQPGSLTGNDQLYNVIVTAHAFVMIFFMVMPVMIGGFGNWLVPLMLGVPDMVFPRLNNMSFWLLPPALFLLLMSSLVESGAGTGWTVYPPLASNIAHSGASVDMAIFSLHLAGISSILGAINFMTTIINMRSECMNLSRIPLFVWSVFITALLLLLSLPVLAGAITMLLTDRNLNTTFFDPAGGGDPILYQHLFWF------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 'Bitectipora_retepora' STNHKDIGTLYFLFGLWAGMTGSGLSMAIRSELGHPGSMMGNDQVYNVIVTAHAFFMIFFLVMPVMIGGFGNWLIPLMLGVPDMAFPRMNNMSFWLLPPAAIMLMMSALVESGAGTGWTVYPPLSSNISHSGSSVDMAIFALHLAGVSSILGAINFMVTIINMRGNMMTFIRLPMLVWAIFITTLLLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLFWFFGHPEVYILIIPGFGVVSHIVTNFSSKEQVFGVTGMIYAMLSIAILGFIVWGHHMFVVGMDIDTRAYFSSATMVIAVPTGVKVFSWVTTLHGSSLKYDTPLLWSLGFISLFTFGGLTGIVLANSSLDVVLHDTYYVTAHFHYVLSMGAIFAMFAGFTYWYSLFTGLTLNTYLSKAQFYSTFIGVNVTFFPQHFLGLAGMPRRYS- 'Callopora_lineata' STNHKDIGTLYFLFGLWSGMVGSGLSALIRVELSQPGGLLGNDQLYNVIVTAHAFMMIFFMVMPVMIGGFGNWLVPLMLGAPDMAFPRLNNMSFWLLPPALSLLLLSSLVESGAGTGWTVYPPLSSNLAHSGPSVDLAIFSLHLAGASSILGAINFMSTILNMRSSLMSLMRTPLLVWAVFITAVLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILIIPGFGVISHIVSNYNSKEEVFGVIGM?YAMLSIALLGFIVWGHHMFVVGMDVDTRAYFTSATMVIAIPTGVKVFSWLSTMNGSI?SISSPLLWSLGFIVLFTFGGLTGIVLANSSIDVVLHDTYYVTAHFHYVLSMGAVFTMFAGFSYWFPLFTGL--------------------------------------- 'Celleporella_hyalina' SSNHKDIGTLYFLFGLWSGMIGSGLSSLIRVELSQPGSLLGNDHLYNVIVTAHAFLMIFFLVMPVLIGGFGNWLIPLMLSAPDMAFPRLNNMSFWLLPPALLLILCSFNAESGSGTGWTIYPPLSSNIAHSGPSVDLTIFSLHMAGISSILGAVNFISTTVNAR?SLMGLMKLPLLISATSITAILLLLSLPVLAGAITMLLTDRNLNTSFFDPSGGGDPILYQHLFWFFGHPEVYVLIIPGFGIISHIVSNYSSKEEAFGALGMLYAMTSIALLGFIVWGHHMFVVGMDVDTRAYFTSATMVIAIPTGVKVFSWLSSMNGSMVNFEAPMLWSLGFITLFTLGGLTGIILANSSIDLVLHDTYYVTAHFHYVLSMGAVFSIFAGFTYWFPLFTGLTLNTYMSKAHFYLMFIGVNMTFFPQHFLGLAGMPRRYS- 'Chiastosella_watersi' STNHKDIGTLYFMFGLWAGMLGSGLSALIRVELSQPGGLMGNDQLYNVIVTAHAFMMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRLNNMSFWLLPPAIYLLLMSSLVESGAGTGWTVYPPLSSSTAHSGSSVDLAIFSLHLAGASSILGAINFMTTVMNMRSHKMNMMRIPLMVWAVFITAILLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILIIPGFGVISHIVSFYSSKEEVFGVIGMIYAMLSIALLGFIVWGHHMFVVGMDVDTRAYFTSATMVIAVPTGVKVFSWLSTMNGTNPKFDAPMLWALGFIVLFTFGGLTGIVLANSSIDVVLHDTYYVTAHFHYVLSMGAVFTMFAGFTYWFPLFTGMTMNKYMAKAHFYTTFIGVNMTFFPQHFLGLAGMPRRYS- 'Costaticella_bicuspis' STNHKDIGTLYFLFGLWTGMIGSGFSALIRTELSQPGQLLNNDQLYNTIVTAHAFIMIFFMIMPIMIGGFGNWLIPLMLGAPDMAFPRLNNMSFWLLPPSLFLLLSSSLVESGAGTGWTVYPPLSSNMAHSGPSVDLVIFSLHLAGVSSILGAINFMTTVINMRSKQMTMMKMPMLIWAIFITAILLLLSLPVLAGAITMLLTDRNVNTSFFDPAGGGDPILYQHLFWFFGHPEVYILIIPGFGMISHIVADYSSKDEVFGTIGMIYAILSIALLGFIVWGHHMFVVGMDIDTRAYFTTATMVIAVPTGVKVFSWLSTMNGTILIFSAPFLWALGFIVLFTCGGLTGIVLANSSIDVTLHDTYYVTAHFHYVLSMGAVFTIFAGFTYWFPLFTGMTLNPYMAKANFYSMFIGVNMTFFPQHFLGLAGMPRRYS- 'Cryptosula_pallasiana' -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WFFGHPEVYILIIPGFGMISHIITNYSNKEEVFGVTGMIYAMLSIALLGFIVWGHHMFTVGMDVDTRAYFTSATMVIAVPTGVKVFSWLATMNGSIPEFHAPMLWSLGFIMLFTFGGLTGIVLANSSVDVVLHDTYYVVAHFHYVLSMGAVFAMFAGFTYWFPLFTGLTLNKYLAKAHFYTTFIGVNVTFFPQHFLGLAGMPRRYS- 'Electra_pilosa' -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WFFVHPEVYILILPGFGIISHVVASYSFK?EVFGPIGMIYAMLSIGLLGFIVWAPHMFVVGMDVDTRAYFTSATMVIAIPTGVKIFSWLSTMNGSVLKFDAPMLWALGFVFLFTLGGLTGIVLANSSLDVVLHDTYYVVAHFHYVLSMG?VFAIFAGFLYWFPLFSGFTLNSYYSNAHFFLTFLG---------------------- 'Escharoides_angela' STNHKDIGTLYFLFGLWAGMVGSGLSALIRVELSQPGSLLGNDQLYNVVVTAHAFMMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRLNNMSFWLLIPAVLLLLMSSLVEGGAGTGWTVYPPLSSNIAHSGPSVDLAIFSLHLAGISSILGAINFMTTVINMRSKMMTFMKVPLLVWAVFITAILLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILIIPGFGVISHIVSNYSNKEEVFGVVGMVYAMLSIALLGFIVWGHHMFVVGMDVDTRAYFTSATMVIAVPTGVKVFSWLSTMSGTILDFSPPMLWALGFIMLFTLGGLTGIVLANSSIDVILHDTYYVTAHFHYVLSMGAVFTMFAGFYYWFPLFTGLTLNNYLTKAHFYTTFIGVNMTFFPQHFLGLAGMPRRYS- 'Fenestrulina_sp' STNHKDIGTLYFLFGLWAGMVGSGLSALIRVELSQPGSLLGNDQLYNVIVTAHAFLMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRLNNMSFWLLPPSIMLILMSSLVESGAGTGWTVYPPLSSNISHSGSSVDLAIFSLHLAGASSILGAINFMTTIINMRSKMMTFMRISLLTWAVFITAILLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILIIPGFGVISHIISNYSNKEEVFGVIGMIYAMMSIALLGFIVWGHHMFVVGMDIDTRGYFTSATMVIAVPTGVKVFSWLSTMNGSIPEFSAPMLWALGFIVLFTFGGLTGIVLANSSIDVILHDTYYVTAHFHYVLSMGAVFTMFAGFTYWYPLFTGLTLNSYLTKAHFYTTFIGVNMTFFPQHFLGLAGMPRRYS- 'Flustra_foliacea' STNHKDIGTLYFMFGLWSGMVGSGLSALIRAELSQSGGLMGNDQLYNVIVTAHAFLMIFFMVMPVMIGGFGNWLIPLMLGAPDMAFPRLNNMSFWLLPPALILLLLSSMVESGAGTGWTVYPPLASNIAHSGASVDLAIFSLHLAGVSSILGAINFMTTVVNMRSKMMTMLCIPLLVWAVFITAVLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILIIPGFGVISHIISNYSSKEEVFGVMGMIYAMVSIALLGFIVWGHHMFIVGMDIDTRAYFTSATMVIAVPTGVKVFSWLSTMNGSIPTFGAPMLWALGFVVLFTFGGLTGIVLANSSIDVVLHDTYYVTAHFHYVLSMGAVFTMFAGFSYWFPLFCGVSLNTYMAKAHFYLTFIGVNMTFFPQHFLGLAGMPRRYS- 'Flustrellidra_hispida' STNHKDIGTLYLLFGLWSGMVGSAFSGLIRAELSQTGSLLGNDQIYNVIVTAHAFVMIFFMVMPVMIGGFGNWLVPVMLGAPDMAFPRLNNMSFWLLPPALFLLLLSSVVEAGAGTGWTVYPPLSSLTAHSGASVDLAIFSLHLAGASSILGAINFMTTVINMRSKAMTAARVPLFVWSVFITALLLLLSLPVLAGAITMLLTDRNLNTTFFDPSGGGDPILYQHLFWFFGHPEVYILILPGFGMISHVVASYSNKEEVFGTVGMIYAMLSIALLGFIVWAHHMFTVGLDVDTRAYFTSATMVIAVPTGVKVFSWLATINGSKLKFEVPMLWSLGFIFLFTFGGLTGIMLANSSVDVVLHDTYYVVAHFHYVLSMGAAFSMFAGFLYWWPLFSGTTMNTYMAQAHFWLTFVGVNMTFFPQHFLGLAGMPRRYS- 'Galeopsis_porcellanicus' ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YSNKEEVFGVVGMIYAMLSIALLGFIVWGHHMFVVGMDVDTRAYFTSATMVIAVPTGVKVFSWLSTMNGSQPTFSAPMLWSMGFIVLFTFGGLTGIVLANSSIDVVLHDTYYVTAHFHYVLSMGAVFTMFAGFTYWFPLFTGLTLNTYLAKAHFYSTFIGVNMTFFPQHFLGLAGMP----- 'Membranipora_membranacea' -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WFFGHPEVYILILPGFGIISHVIMNYSMKEEVFGPLGMIYAMISIGLLGFIVWAHHMFVVGMDIDTRAYFTSATMVIAVPTGVKIFSWLSTMNGSMLKFSPAMLWALGFVFLFTLGGLTGIVLANSSLDVVLHDTYYVVAHFHYVLSMGAVFAMFAGFIYWFPLFTGMSLNDKYAKAHFYLTFVGVNMTFFPQHFLGLAGMPRRYS- 'Microporella_agonistes' -----------------AGMVGSGLSALIRVELNQPGSLMGNDQLYNVIVTAHAFLMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRLNNMSFWLLPPALILLLTSSMIESGAGTGWTVYPPLSANMAHSGPSVDLAIFSLHIAGASSILGAINFMTTVMNMRSKTMTMMQTPLLVWAVFITAVLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGD----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 'Microporella_cf_ciliata' STNHKDIGTLYFLFGLWAGMVGSGLSALIRVELNQPGSLMGNDQLYNVIVTAHAFLMIFFMVMPIMIGGFGNWLVPLMLGVPDMAFPRLNNMSFWLLPPALILLLGSSMIESGAGTGWTVYPPLSANMAHSGPSVDLAIFSLHIAGASSILGAINFMTTVMNMRSKVMTMMKIPLLVWAVFITAILLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILIIPGFGVISHIVSNYTDSEEVFGVVGMVYAMLSIALLGFIVWGHHMFVVGMDIDTRAYFTSATMVIAIPTGVKVFSWLSTMNGSIPSFTTPLLWALGFIVLFTFGGLTGIVLANSSIDVILHDTYYVTAHFHYVLSMGAVFTMFAGFTYWFPLFTGLSINSYMAKAHFYITFIGVNITFFPQHFLGLAGMPRRYS- 'Microporella_n_sp_1' ----------------------------------------------------------FFMVMPIMIGGFGNWLVPLMLGAPDMAFPRLNNMSFWLLPPALTLLLTSSMIESGAGTGWTVYPPLSANMAHSGPSVDLAIFSLHIAGASYILGAVNFMTTIMNMRSKLMTMMQIPLLVWAIFITAVLLLLSLPVL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ 'Microporella_n_sp_2' -------------------MTGSGLSALIRVELNQPGSLMGNDQLYNVIVTAHAFLMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRLNNMSFWLLPPALILLLSSSMIESGAGTGWTVYPPLSSNMAHSGASVDLAIFSLHIAGASSILGAINFMTTVMNMRSKVMTMMQTPLLVWAVFITAVLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPIL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 'Microporella_ordo ' STNHKDIGTLYFLFGLWAGMVGSGLSALIRVELNQPGSLMGNDQLYNVIVTAHAFLMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRLNNMSFWLLPPALTLLLTSSMIESGAGTGWTVYPPLSANMAHSGPSVDLAIFSLHIAGASSILGAVNFMTTVMNMRSKLMTMMQVPLLVWAVFITAVLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILIIPGFGVISHIVSNYSDTEEVFGVVGMIYAMLSIALLGFIVWGHHMFVVGMDIDTRAYFTSATMVIAIPTGVKVFSWLSTMNGSIPVFSTALLWSLGFIVLFTFGGLTGIVLANSSIDVILHDTYYVTAHFHYVLSMGAVFTMFAGFSYWFPLFTGMAMNSYMAKAHFYTTFIGVNVTFFPQHFLGLAGMPRRYS- 'Microporella_sp' STNHKDIGTLYFLFGLWAGMVGSGLSALIRVELNQPGSLMGNDQLYNVIVTAHAFLMIFFMVMPIMIGGFGNWLVPLMLGVPDMAFPRLNNMSFWLLPPALILLLASSMIESGAGTGWTVYPPLSANMAHSGPSVDLAIFSLHIAGASSILGAINFMTTVMNMRSKVMTMMKIPLLVWAVFITAILLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILIIPGFGVISHIVSNYTDSEEVFGVVGMIYAMLSIALLGFIVWGHHMFVVGMDIDTRAYFTSATMVIAIPTGVKVFSWLSTMNGSIPTFSTPLLWALGFIVLFTFGGLTGIVLANSSIDVILHDTYYVTAHFHYVLSMGAVFTMFAGFTYWFPLFTGLSINTYMAKAHFYTTFIGVNVTFFPQHFLGLAGMPRRYS- 'Orthoscuticella_innominata' STNHKDIGTLYFLFGLWTGMIGSGFSALIRTELSQPGQLL-NDQLYNTIVTAHAFLMIFFMIMPIMIGGFGNWLIPLMLGAPDMAFPRLNNMSFWLLPPSLFLLLSSSLVESGAGTGWTVYPPLSSSMAHSGPSVDLVIFSLHLAGISSILGAINFMTTVINMRSKQMTMMKMPMLIWAIFITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQHLFWFFGHPEVYILIIPGFGMISHIVADYSSKDEVFGVIGMIYAILSIALLGFIVWGHHMFVVGMDIDTRAYFTTATMVIAVPTGVKVFSWLSTMNGSILNFSTPFLWALGFIVLFTCGGLTGIVLANSSIDVTLHDTYYVTAHFHYVLSMGAVFSIFAGFTYWFPLFSGMTLNTYMAKANFYSMFIGVNMTFFPQHFLGLAGMPRRYS- 'Paludicella_sp' -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WFFGHPEVYILILPGFGMISHVVTHNSQKEEVFGTIGMIYAMMSIGLLGFIVWAHHSVTVGMDVDTRAYFTSATMVIAIPTGVKVFSWLSTMNGSTLTFDVSMLWALGFIFLFTLGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAMFAGFTYWFPLFTGLTLNPYYAKAHFYVTF------------------------ 'Rhynchozoon_zealandicum' --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SKEEVFGVLGMIYAMLSIALLGFIVWGHHMFTVGMDVDTRAYFTAATMVIAVPTGVKVFSWLTTLNGANPIFQPPMLWAMGFIVLFTLGGLTGIVLANSSVDVVLHDTYYVIGHFHYVLSMGAVFTMFAGFYYWFPLFTGLTLNKYMAKAHFFTTFIGVNLTFFPQHFLGLSGMP----- 'Schizoporella_dunkeri' -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WFFGHPEVYILVIPGFGMISHIISNYSNKEEAFGVIGMIYAMMSIALLGFIVWAHHMFTVGMDVDTRAYFSAATMVIAVPTGVKVFSWLCTMNGSIPTFSIPMLWSLGFITMFTFGGLTGIVMANSSLDVVLHDTYYIVGHFHYVLSMGAVFAIFAGFTYWFPLITGLTLNNYMGKAHFY--------------------------- 'Scruparia_chelata' --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FGIISHVVANYSSKEEVFGTVGMIYAMLSIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMVIAVPTGVKVFSWLSTMNGSVLQFDASMLWALGFVFLFTLGGLTGIVLANSSLDVALHDTYYVVAHFHYVLSMGAVFAMFAGFCYWFPLFVGLSL------------------------------------- 'Umbonula_littoralis' STNHKDIGTLYFLFGLWAGMSGSGMSALIRVELGQPGSLLGNDQLYNVVVTAHAFMMIFFMVMPIMIGGFGNWLIPLMLGVPDMAFPRLNNMSFWLLPPALMLLLMSSLVESGAGTGWTVYPPLSSNISHSGASVDMAIFSLHLAGVSSILGAINFMTTIINMRSKKMSMICMPLLSWAVFITAILLLLSLPVLAGAITMLLTDRNVNTSFFVPAGGGDPILYQHLFWFFGHPEVYILIIPGFGVISHIVSNFSNKEEVFGVMGMIYAMMSIALLGFIVWGHHMFVVGMDIDTRAYFTSATMVIAVPTGVKVFSWLSTMNGSVPEFPAPMLWSLGFIVLFTFGGLTGIVLANSSVDVVLHDTYYVTAHFHYVLSMGAVFTMFAGFTYWFTLFTGLTLNTYLAKAHFYSTFIGVNLTFFPQHFLGLSGMPRRYS- 'Watersipora_subtorquata' STNHKDIGTLYFLFGLWSAMTGSGLSMAIRAELGNPGSLMGNDQIYNVIVTAHAFFMIFFMVMPIMIGGFGNWLVPLMMGIPDMAFPRMNNMSFWLLPPAAILLMMSALVESGAGTGWTVYPPLSSNISHSGSSVDMAIFALHLAGVSSILGAINFMVTIINMRGKSMSFMNLPLFVWAVFITALLLLLSLPVLAGAITMLLTDRNFNSSFFDPAGGGDPILYQHLFWFFGHPEVYILIIPGFGVISHVVTNFSSKEQVFGVTGMIYAMLSIAILGFIVWGHHMFVVGMDIDTRSYFSSATMVIAVPTGVKVFSWLTTLHGSTVKYETPMLWALGFIVLFMFGGLTGIVLANSSLDVVLHDTYYVTAHFHYVLSMGAVFAMFSGFTYWYPLFTGLTLNTYLAKAQFYSTFIGVNITFFPQHFLGLAGMPRRYS- ; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 434; END; BEGIN NOTES; TAXABITS NAME = newlyAddedTaxon on = 1 - 29; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 434; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Mk1 (est.)': 1 - 434; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1522062129113; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 2765102944834460053; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 5769039629649450075; mqVersion 340; checksumv 0 3 3133307633 null getNumChars 434 numChars 434 getNumTaxa 29 numTaxa 29 short false bits 1048575 states 1048575 sumSquaresStatesOnly 1.20831595286358E14 sumSquares 1.20831595286358E14 longCompressibleToShort false usingShortMatrix false NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 100; setPopoutState 300; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 960 561; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #5769039629649450075 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 860 489; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.AlterData.AlterData; tell It; toggleBySubmenus off; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 16 6 1 1; subCosts 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;